SAMPID SMATSSCR SMCENTER SMPTHNTS SMRIN SMTS SMTSD SMUBRID SMTSISCH SMTSPAX SMNABTCH SMNABTCHT SMNABTCHD SMGEBTCH SMGEBTCHD SMGEBTCHT SMAFRZE SMGTC SME2MPRT SMCHMPRS SMNTRART SMNUMGPS SMMAPRT SMEXNCRT SM550NRM SMGNSDTC SMUNMPRT SM350NRM SMRDLGTH SMMNCPB SME1MMRT SMSFLGTH SMESTLBS SMMPPD SMNTERRT SMRRNANM SMRDTTL SMVQCFL SMMNCV SMTRSCPT SMMPPDPR SMCGLGTH SMGAPPCT SMUNPDRD SMNTRNRT SMMPUNRT SMEXPEFF SMMPPDUN SME2MMRT SME2ANTI SMALTALG SME2SNSE SMMFLGTH SME1ANTI SMSPLTRD SMBSMMRT SME1SNSE SME1PCTS SMRRNART SME1MPRT SMNUM5CD SMDPMPRT SME2PCTS GTEX-1117F-0003-SM-58Q7G B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1117F-0003-SM-5DWSB B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1117F-0003-SM-6WBT7 B1 Blood Whole Blood 0013756 1188 BP-38516 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/02/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1117F-0011-R10a-SM-AHZ7F B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1193 ChIP-Seq GTEX-1117F-0011-R10b-SM-CYKQ8 B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 1193 BP-42319 RNA isolation_PAXgene Tissue miRNA 08/14/2013 RIP-Seq GTEX-1117F-0226-SM-5GZZ7 0 B1 2 pieces, ~15% vessel stroma, rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1214 1125 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986026 345562 0.966793 0.990383 0.756726 23548 1 76 0.00240323 136 0 6.68332e+07 0.0329192 209558 6.74822e+07 8.79766e+06 23575 3.3158e+07 0 0.210067 0.990383 0.749449 6.68332e+07 0.00391915 1.44627e+07 8.9149e+06 1.45756e+07 144 1.46488e+07 1.19993e+07 0.00315785 1.46695e+07 50.0354 0.00310538 0.99474 0 50.1944 GTEX-1117F-0426-SM-5EGHI 0 B1 2 pieces, !5% fibrous connective tissue, delineated (rep) 7.1 Muscle Muscle - Skeletal 0011907 1220 1119 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985786 145441 0.978816 0.990413 0.838961 20246 1 76 0.00241283 137 0 5.99636e+07 0.0209516 423484 6.05441e+07 9.60146e+06 20259 2.97858e+07 0 0.139855 0.990413 0.830918 5.99636e+07 0.00553754 1.31545e+07 8.38344e+06 1.31258e+07 139 1.31915e+07 1.15502e+07 0.00396788 1.33405e+07 50.2809 0.00699464 0.995041 0 49.9455 GTEX-1117F-0526-SM-5EGHJ 0 B1 2 pieces, clean, Monckebeg medial sclerosis, rep delineated 8 Blood Vessel Artery - Tibial 0007610 1221 1120 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983859 223040 0.97136 0.98893 0.767837 22193 1 76 0.00263069 126 0 5.98394e+07 0.0283102 173556 6.05092e+07 9.40759e+06 22218 2.9681e+07 0 0.203524 0.98893 0.759337 5.98394e+07 0.00592874 1.29512e+07 6.13979e+06 1.30901e+07 125 1.31754e+07 1.10003e+07 0.00427126 1.31509e+07 49.9535 0.00286826 0.994001 0 50.2667 GTEX-1117F-0626-SM-5N9CS 1 B1 2 pieces, up to 4mm aderent fat/nerve/vessel, delineated 6.9 Blood Vessel Artery - Coronary 0001621 1243 1098 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990294 174501 0.970076 0.991275 0.76982 23331 1 76 0.0030529 136 0 6.98592e+07 0.0296435 376087 7.0474e+07 3.63312e+06 23354 3.47665e+07 0 0.200257 0.991275 0.763103 6.98592e+07 0.00367148 1.51676e+07 6.12486e+06 1.52201e+07 151 1.51642e+07 1.16179e+07 0.00336188 1.52919e+07 50.2096 0.00533653 0.992257 0 50.0865 GTEX-1117F-0726-SM-5GIEN 1 B1 2 pieces, no abnormalities 6.3 Heart Heart - Atrial Appendage 0006631 1244 1097 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990734 184394 0.97883 0.993223 0.803478 22000 1 76 0.00311411 131 0 6.28857e+07 0.0208913 1.93643e+06 6.33148e+07 8.25297e+06 22015 3.12915e+07 0 0.175352 0.993223 0.798033 6.28857e+07 0.00377222 1.36366e+07 9.07565e+06 1.36128e+07 146 1.36271e+07 9.26607e+06 0.00344234 1.37567e+07 50.2367 0.0305841 0.995711 0 49.9563 GTEX-1117F-1326-SM-5EGHH 1 B1 2 pieces, diffuse mesothelial hyperplasia; ~10% vessel/fibrous tissue (delineated) 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1277 1066 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.97952 197036 0.975456 0.984949 0.75952 22537 1 76 0.00320572 125 0 5.97958e+07 0.0230271 627193 6.07095e+07 9.77016e+06 22563 2.96104e+07 0 0.215936 0.984949 0.748088 5.97958e+07 0.00652572 1.32035e+07 1.06673e+07 1.32729e+07 128 1.33794e+07 9.63106e+06 0.00485657 1.34087e+07 50.0547 0.010331 0.990378 0 50.1311 GTEX-1117F-2226-SM-5N9CH 1 B1 1 piece vascular tissue, probably ovarian hilum. Not GTEx target tissue 6.6 Ovary Ovary 0000992 1326 1020 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.98945 124364 0.975523 0.990232 0.737874 23070 1 76 0.00304207 137 0 7.12552e+07 0.0241708 150706 7.1958e+07 3.5473e+06 23105 3.54604e+07 0 0.237649 0.990232 0.730667 7.12552e+07 0.00357204 1.57974e+07 7.11921e+06 1.58243e+07 145 1.57704e+07 1.27006e+07 0.00330685 1.59125e+07 50.2242 0.00209436 0.991015 0 50.0425 GTEX-1117F-2426-SM-5EGGH 1 B1 1 piece mymetrial smooth muscle as in corresonding -25 block 6.3 Uterus Uterus 0000995 1332 1014 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984661 194724 0.965403 0.988792 0.735671 23103 1 76 0.00255558 119 0 5.82363e+07 0.0343173 220923 5.88964e+07 7.76094e+06 23129 2.89044e+07 0 0.229732 0.988792 0.727426 5.82363e+07 0.00557137 1.25514e+07 6.07303e+06 1.27295e+07 122 1.27675e+07 9.25983e+06 0.00405717 1.27425e+07 49.951 0.00375104 0.992923 0 50.3523 GTEX-1117F-2526-SM-5GZY6 2 B1 6 pieces, squamous epithelium is ~ 2-3% thickness, partially sloughing 6.5 Vagina Vagina 0000996 1329 1017 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.98259 344132 0.971094 0.987546 0.72005 24334 1 76 0.00372487 159 0 8.52884e+07 0.0286493 319586 8.63639e+07 8.69306e+06 24371 4.2284e+07 0 0.251044 0.987546 0.711083 8.52884e+07 0.00528319 1.90043e+07 1.14784e+07 1.90735e+07 169 1.92219e+07 1.3111e+07 0.00450012 1.92766e+07 50.071 0.00370046 0.992502 0 50.0908 GTEX-1117F-2826-SM-5GZXL 1 B1 2 pieces, fibrocystic changes, rep ductal/lobular elements delineated 5.8 Breast Breast - Mammary Tissue 0008367 1340 1008 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986772 292774 0.974209 0.990544 0.784373 23391 1 76 0.00251812 146 0 6.82899e+07 0.0254389 1.03572e+06 6.89418e+07 7.84024e+06 23415 3.39088e+07 0 0.189836 0.990544 0.776956 6.82899e+07 0.00401725 1.49524e+07 7.90489e+06 1.49565e+07 154 1.50038e+07 1.14651e+07 0.00326483 1.51518e+07 50.2455 0.0150232 0.994315 0 50.0068 GTEX-1117F-2926-SM-5GZYI 0 B1 6 pieces, minimal fat, squamous epithelium is ~50 microns, ~3% thickness 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1341 1006 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98557 313219 0.979994 0.99015 0.780314 22669 1 76 0.00248983 150 0 6.58073e+07 0.0197528 329878 6.64619e+07 8.84653e+06 22691 3.26483e+07 0 0.19968 0.99015 0.772628 6.58073e+07 0.00412103 1.44343e+07 7.65048e+06 1.4524e+07 149 1.4611e+07 1.16301e+07 0.00330166 1.46412e+07 50.0516 0.00496341 0.99473 0 50.1548 GTEX-1117F-3026-SM-5GZYU 1 B1 2 pieces, generally good, one aliquot has ~25% adherent nubbing of adipose/muscular tissue 8.3 Salivary Gland Minor Salivary Gland 0006330 1343 1005 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987327 241763 0.96673 0.99017 0.745379 24835 1 76 0.00293242 138 0 6.39549e+07 0.0319169 270561 6.45898e+07 8.14951e+06 24864 3.17581e+07 0 0.221351 0.99017 0.738052 6.39549e+07 0.00391051 1.4167e+07 8.6913e+06 1.41785e+07 135 1.42503e+07 1.06016e+07 0.00342006 1.4268e+07 50.0311 0.00418891 0.993013 0 50.0203 GTEX-1117F-3226-SM-5N9CT 1 B1 2 pieces 6.2 Brain Brain - Cortex 0001870 1418 931 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991088 282429 0.963806 0.992538 0.830713 23677 1 76 0.00318897 271 0 8.03926e+07 0.0359635 5.02476e+06 8.0997e+07 3.87614e+06 23692 4.00041e+07 0 0.133093 0.992538 0.824515 8.03926e+07 0.00380108 1.76403e+07 1.4886e+07 1.77755e+07 269 1.76099e+07 8.16385e+06 0.00349458 1.79069e+07 50.418 0.0620363 0.993989 0 50.191 GTEX-111CU-0003-SM-58Q95 B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111CU-0003-SM-5DWTR B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111CU-0003-SM-6WBUD B1 Blood Whole Blood 0013756 -148 BP-38688 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111CU-0126-SM-5GZWZ 0 B1 2 pieces 7.9 Adrenal Gland Adrenal Gland 0002369 67 642 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.9907 240659 0.978599 0.993224 0.828072 23135 1 76 0.00215619 270 0 8.149e+07 0.0210628 1.2004e+06 8.20459e+07 9.73884e+06 23154 4.05543e+07 0 0.150527 0.993224 0.822461 8.149e+07 0.00320897 1.80479e+07 1.51999e+07 1.8003e+07 259 1.79892e+07 1.27568e+07 0.00268124 1.82553e+07 50.3671 0.0146308 0.995748 0 49.9377 GTEX-111CU-0226-SM-5GZXC 0 B1 2 pieces, small amount of attached fat and skeletal muscle 7.4 Thyroid Thyroid 0002046 69 640 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990453 243413 0.974508 0.993029 0.795694 23959 1 76 0.00210467 205 0 8.76512e+07 0.0251936 203007 8.82665e+07 1.10555e+07 23990 4.36154e+07 0 0.178814 0.993029 0.790147 8.76512e+07 0.0030812 1.93551e+07 8.40525e+06 1.94135e+07 240 1.94703e+07 1.6057e+07 0.00259167 1.95077e+07 50.048 0.00229993 0.995605 0 50.0753 GTEX-111CU-0326-SM-5GZXO 0 B1 2 pieces, numerous hemosiderin-laden macrophages, patchy bronchopneumonia, focus of cartilage 7.6 Lung Lung 0008952 70 639 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.99153 216735 0.97613 0.993878 0.823567 23209 1 76 0.0021316 208 0 8.16651e+07 0.0236111 371442 8.21682e+07 1.03151e+07 23235 4.06473e+07 0 0.152563 0.993878 0.818525 8.16651e+07 0.00322808 1.80361e+07 7.08684e+06 1.81543e+07 227 1.81622e+07 1.4858e+07 0.00267855 1.82128e+07 50.0695 0.00452051 0.996225 0 50.1633 GTEX-111CU-0426-SM-5GZY1 0 B1 2 pieces 7.3 Spleen Spleen 0002106 71 638 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991151 337719 0.967919 0.99342 0.805221 25285 1 76 0.00231646 274 0 9.82104e+07 0.0312646 410807 9.88609e+07 1.2198e+07 25322 4.88537e+07 0 0.162697 0.99342 0.799923 9.82104e+07 0.00319034 2.14971e+07 1.43551e+07 2.15327e+07 279 2.15745e+07 1.81762e+07 0.0027524 2.16688e+07 50.1091 0.0041554 0.995688 0 50.0414 GTEX-111CU-0526-SM-5EGHK 1 B1 2 pieces, include 20 and 40% fat (attached and internal) 7.2 Pancreas Pancreas 0001150 72 637 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985529 181343 0.973553 0.990411 0.845136 20708 1 76 0.00254345 93 0 5.84027e+07 0.0262148 89664 5.89682e+07 9.70792e+06 20718 2.89943e+07 0 0.128417 0.990411 0.837032 5.84027e+07 0.00559195 1.33632e+07 1.37729e+07 1.33786e+07 97 1.34152e+07 1.6256e+07 0.00406019 1.36101e+07 50.3607 0.00152055 0.995293 0 50.0289 GTEX-111CU-0626-SM-5EGHL 0 B1 6 pieces, well trimmed of mucosa 7.9 Esophagus Esophagus - Muscularis 0004648 76 633 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987543 175463 0.975958 0.991908 0.840326 21691 1 76 0.00216143 182 0 6.92938e+07 0.0237549 456350 6.98591e+07 1.00949e+07 21707 3.44232e+07 0 0.135632 0.991908 0.833527 6.92938e+07 0.00538477 1.49619e+07 6.81217e+06 1.49721e+07 171 1.50107e+07 1.21969e+07 0.00376601 1.52035e+07 50.3191 0.00653244 0.996274 0 50.017 GTEX-111CU-0726-SM-5GZYD 0 B1 6 pieces, well trimmed of muscularis, few submucosal glands (some delineated) 8.8 Esophagus Esophagus - Mucosa 0006920 77 632 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98884 211714 0.975236 0.991919 0.82761 23363 1 76 0.00222774 212 0 8.11311e+07 0.0243204 290903 8.1792e+07 1.1388e+07 23381 4.03511e+07 0 0.147627 0.991919 0.820921 8.11311e+07 0.00308871 1.80668e+07 1.0363e+07 1.80492e+07 210 1.8093e+07 1.653e+07 0.00265689 1.82631e+07 50.2339 0.00355662 0.994997 0 49.9756 GTEX-111CU-0826-SM-5EGIJ 0 B1 6 pieces, well trimmed of mucosa 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 81 628 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985797 185629 0.973015 0.990417 0.817513 22300 1 76 0.0022048 137 0 6.39213e+07 0.026733 314648 6.45398e+07 1.00634e+07 22317 3.17408e+07 0 0.155502 0.990417 0.809678 6.39213e+07 0.00516498 1.38794e+07 6.31428e+06 1.39073e+07 149 1.39544e+07 1.0902e+07 0.00367799 1.41077e+07 50.2732 0.00487525 0.995036 0 50.0502 GTEX-111CU-0926-SM-5EGIK 0 B1 6 pieces, few with small portion of muscularis 7.8 Stomach Stomach 0000945 83 626 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979521 177121 0.981442 0.984038 0.842236 21333 1 76 0.00197131 265 0 5.94903e+07 0.0181959 262075 6.04553e+07 9.03232e+06 21344 2.95311e+07 0 0.139206 0.984038 0.828792 5.94903e+07 0.00498414 1.37196e+07 6.53746e+07 1.38172e+07 167 1.38651e+07 1.6709e+07 0.00347081 1.39386e+07 50.1322 0.00433502 0.988555 0 50.1771 GTEX-111CU-1026-SM-5EGIL 0 B1 2 pieces 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 84 625 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985146 216518 0.979333 0.990145 0.851509 21995 1 76 0.0022622 203 0 7.76821e+07 0.0204191 1.08518e+06 7.84553e+07 1.24624e+07 22013 3.85662e+07 0 0.127824 0.990145 0.843117 7.76821e+07 0.00548048 1.71e+07 1.11785e+07 1.70439e+07 246 1.70772e+07 1.19732e+07 0.00386321 1.74242e+07 50.5029 0.0138318 0.995145 0 49.9178 GTEX-111CU-1126-SM-5EGIM 1 B1 6 pieces, well trimmed with only scant attached fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 86 623 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981493 186212 0.970077 0.987541 0.785544 22439 1 76 0.00234567 158 0 5.73142e+07 0.0297603 461473 5.80373e+07 9.63306e+06 22457 2.84141e+07 0 0.184533 0.987541 0.775757 5.73142e+07 0.00593885 1.25148e+07 7.63547e+06 1.25655e+07 140 1.2624e+07 8.41844e+06 0.00413126 1.27849e+07 50.3166 0.00795132 0.993589 0 50.1011 GTEX-111CU-1226-SM-5EGIN 1 B1 6 pieces, well trimmed of mucosa 7.3 Colon Colon - Sigmoid 0001159 91 618 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987678 187150 0.974827 0.991574 0.826701 22240 1 76 0.00214621 148 0 6.34707e+07 0.0249216 301125 6.40101e+07 8.63761e+06 22252 3.1537e+07 0 0.148127 0.991574 0.819735 6.34707e+07 0.00516543 1.37703e+07 6.02328e+06 1.38062e+07 149 1.38153e+07 1.11254e+07 0.00364989 1.39915e+07 50.3169 0.00470434 0.99547 0 50.0652 GTEX-111CU-1326-SM-5NQ8L 0 B1 6 pieces, prominent lymphoid component in 4 of 6 pieces 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 94 615 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990741 180493 0.974979 0.99286 0.82586 22800 1 76 0.00189086 165 0 7.51845e+07 0.0247836 616942 7.57252e+07 5.76464e+06 22820 3.74306e+07 0 0.149119 0.99286 0.819963 7.51845e+07 0.00292535 1.64053e+07 7.18205e+06 1.66236e+07 195 1.65349e+07 1.23416e+07 0.002407 1.66492e+07 50.1723 0.00814712 0.994979 0 50.3305 GTEX-111CU-1426-SM-5GZYP 1 B1 6 pieces, predominantly mucosa and submucosa with small portion of muscularis, edema 7.8 Colon Colon - Transverse 0001157 100 609 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989352 229793 0.975903 0.99248 0.817932 22970 1 76 0.00225654 229 0 8.01395e+07 0.0233889 634774 8.07467e+07 1.00863e+07 22993 3.984e+07 0 0.157971 0.99248 0.811782 8.01395e+07 0.0032622 1.78767e+07 1.13872e+07 1.77944e+07 235 1.7849e+07 1.34059e+07 0.00275778 1.8057e+07 50.2897 0.0078613 0.995609 0 49.8847 GTEX-111CU-1526-SM-5N9FS 1 B1 2 pieces, patchy chronic prostatitis, portion of seminal vesicle 5.7 Prostate Prostate 0002367 103 606 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986912 472069 0.967739 0.988451 0.789782 25526 1 76 0.00402975 271 0 1.04235e+08 0.0320565 354320 1.05452e+08 5.69945e+06 25563 5.17358e+07 0 0.177957 0.988451 0.780661 1.04235e+08 0.00418277 2.2753e+07 1.12574e+07 2.28687e+07 323 2.27932e+07 1.49353e+07 0.00410614 2.29879e+07 50.2127 0.00336 0.98999 0 50.1268 GTEX-111CU-1726-SM-5EGHM 0 B1 2 pieces, active spermatogenesis 6.9 Testis Testis 0000473 108 601 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984303 227756 0.936059 0.989243 0.753721 31570 1 76 0.00232766 125 0 6.37073e+07 0.0636368 719937 6.44001e+07 9.66596e+06 31621 3.16225e+07 0 0.182338 0.989243 0.745613 6.37073e+07 0.00551321 1.33426e+07 9.40222e+06 1.33413e+07 131 1.34461e+07 1.09062e+07 0.00391248 1.35186e+07 50.1345 0.0111791 0.994182 0 49.9974 GTEX-111CU-1826-SM-5GZYN 0 B1 2 pieces, small portion of nerve (<10% of one piece) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 138 571 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989284 273609 0.97799 0.992599 0.824185 22368 1 76 0.0021283 149 0 6.93063e+07 0.0217092 148616 6.98231e+07 8.52491e+06 22386 3.44557e+07 0 0.153806 0.992599 0.818085 6.93063e+07 0.00339715 1.52882e+07 6.07105e+06 1.53605e+07 161 1.5416e+07 1.31919e+07 0.0027606 1.54512e+07 50.057 0.00212847 0.995915 0 50.118 GTEX-111CU-1926-SM-5GZYZ 1 B1 6 pieces, several with 10-30% predominantly attached adipose tissue, squamous epithelium is ~45-50 microns thick 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 141 568 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 EXCLUDE 0.986289 378238 0.969821 0.989655 0.769778 25159 1 76 0.00229169 263 0 9.31994e+07 0.0299903 612312 9.41736e+07 1.22107e+07 25189 4.63031e+07 0 0.200043 0.989655 0.761815 9.31994e+07 0.00380585 2.04908e+07 1.43746e+07 2.05611e+07 256 2.05467e+07 1.21314e+07 0.0030462 2.08141e+07 50.3232 0.00650195 0.993022 0 50.0856 GTEX-111CU-2026-SM-5GZZC 1 B1 2 pieces, includes ~10% internal fat 8.1 Muscle Muscle - Skeletal 0011907 144 565 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.992125 242236 0.983495 0.994271 0.871302 19832 1 76 0.00189213 215 0 8.1039e+07 0.0162653 882660 8.1506e+07 9.93238e+06 19843 4.03489e+07 0 0.112193 0.994271 0.86631 8.1039e+07 0.00290881 1.75923e+07 1.23091e+07 1.75743e+07 241 1.75444e+07 1.61704e+07 0.00239937 1.7784e+07 50.3391 0.0108294 0.996416 0 49.9744 GTEX-111CU-2226-SM-5N9G5 1 B1 6 pieces, includes up to 20-30% fat 5.7 Nerve Nerve - Tibial 0001323 148 561 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988661 302406 0.969955 0.989955 0.766338 24219 1 76 0.00395637 174 0 8.55854e+07 0.0298377 303325 8.64538e+07 4.18167e+06 24249 4.25228e+07 0 0.203617 0.989955 0.75864 8.55854e+07 0.0040234 1.88346e+07 7.28499e+06 1.88987e+07 198 1.88434e+07 1.26353e+07 0.00398984 1.9001e+07 50.2082 0.00350852 0.991249 0 50.0849 GTEX-111FC-0001-SM-58Q7U B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111FC-0001-SM-5DWSO B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111FC-0001-SM-6WBTJ B1 Blood Whole Blood 0013756 963 BP-38625 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/06/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111FC-0011-R10a-SM-AHZ7K B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 970 ChIP-Seq GTEX-111FC-0011-R10a-SM-CYKQ9 B1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 970 BP-42339 RNA isolation_PAXgene Tissue miRNA 08/14/2013 RIP-Seq GTEX-111FC-0126-SM-5N9DL 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium is 30-42 microns thick 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1036 870 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992184 256959 0.974066 0.992999 0.827997 23779 1 76 0.00281383 299 0 9.73027e+07 0.0255496 715324 9.79887e+07 4.42266e+06 23806 4.8454e+07 0 0.146069 0.992999 0.8222 9.73027e+07 0.00339275 2.09298e+07 1.2311e+07 2.10399e+07 295 2.09527e+07 1.67289e+07 0.00310305 2.10928e+07 50.1666 0.00730006 0.993813 0 50.1312 GTEX-111FC-0226-SM-5N9B8 2 B1 2 pieces, larger piece is 30% fibrovascular tissue and nerve, smaller piece ~10% 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1040 869 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992062 167541 0.974332 0.992977 0.812219 23977 1 76 0.00280933 282 0 9.46419e+07 0.0253254 357934 9.53113e+07 4.85383e+06 24018 4.71286e+07 0 0.162113 0.992977 0.806515 9.46419e+07 0.00340007 2.07783e+07 8.50916e+06 2.08752e+07 256 2.08313e+07 1.75542e+07 0.00310443 2.09111e+07 50.0955 0.00375542 0.993892 0 50.1164 GTEX-111FC-0326-SM-5GZZ1 1 B1 2 pieces, skeletal muscle with only scant adipose tissue, small portion of tendon and fibrovascular tissue 8.2 Muscle Muscle - Skeletal 0011907 1045 862 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989243 253951 0.98377 0.992558 0.863363 20025 1 76 0.00217369 201 0 7.86056e+07 0.0160552 1.11851e+06 7.91949e+07 1.11002e+07 20036 3.90911e+07 0 0.120407 0.992558 0.856938 7.86056e+07 0.00332793 1.73109e+07 1.31875e+07 1.71526e+07 205 1.72386e+07 1.59485e+07 0.00274888 1.74581e+07 50.3163 0.0141235 0.995872 0 49.7703 GTEX-111FC-0426-SM-5N9CV 1 B1 2 pieces, medial calcific sclerosis (Monckeberg's sclerosis), both sections 7.8 Blood Vessel Artery - Tibial 0007610 1046 862 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992338 142487 0.975816 0.993075 0.840283 21257 1 76 0.00271524 147 0 7.0447e+07 0.0237288 209991 7.09382e+07 3.1584e+06 21269 3.50762e+07 0 0.135532 0.993075 0.834465 7.0447e+07 0.00324538 1.51553e+07 5.48971e+06 1.51822e+07 155 1.512e+07 1.47883e+07 0.00298011 1.52711e+07 50.2487 0.0029602 0.993812 0 50.0443 GTEX-111FC-0526-SM-5GZZ8 1 B1 2 pieces, includes 10-20% predominantly internal adipose tissue 7.2 Nerve Nerve - Tibial 0001323 1050 858 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988325 297754 0.965373 0.991446 0.749191 24139 1 76 0.00231331 160 0 7.18896e+07 0.0343213 221742 7.25098e+07 8.98322e+06 24176 3.57182e+07 0 0.216182 0.991446 0.742783 7.18896e+07 0.00366955 1.57556e+07 6.75489e+06 1.58686e+07 161 1.59175e+07 1.10687e+07 0.00298929 1.59233e+07 50.0091 0.0030581 0.994568 0 50.1787 GTEX-111FC-0626-SM-5N9CU 1 B1 2 pieces, includes up to ~10% internal adipose tissue 7.3 Heart Heart - Atrial Appendage 0006631 1054 852 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992352 166671 0.971632 0.993478 0.792965 22541 1 76 0.00280312 123 0 6.35757e+07 0.0280958 1.0168e+06 6.3993e+07 3.07733e+06 22563 3.16629e+07 0 0.178667 0.993478 0.787794 6.35757e+07 0.00329551 1.38393e+07 7.02463e+06 1.38904e+07 141 1.38698e+07 1.04501e+07 0.00304904 1.39272e+07 50.1033 0.0158892 0.994604 0 50.0921 GTEX-111FC-0826-SM-5GZWO 1 B1 2 pieces, small attachment of fat, vessel, and nerve 7 Heart Heart - Left Ventricle 0006566 1060 849 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987864 238512 0.979429 0.991899 0.824639 22216 1 76 0.00231171 199 0 7.93912e+07 0.0203939 2.7121e+06 8.00396e+07 1.02786e+07 22238 3.94342e+07 0 0.15479 0.991899 0.817958 7.93912e+07 0.00400837 1.75955e+07 1.38081e+07 1.74849e+07 226 1.76305e+07 1.02812e+07 0.00315659 1.77374e+07 50.151 0.0338844 0.995934 0 49.8423 GTEX-111FC-0826-SM-CYKRT 1 B1 2 pieces, small attachment of fat, vessel, and nerve 7 Heart Heart - Left Ventricle 0006566 1060 849 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 RIP-Seq GTEX-111FC-1026-SM-5GZX1 2 B1 2 pieces, moderate autolysis 5.9 Thyroid Thyroid 0002046 1078 832 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987211 224397 0.966388 0.990886 0.802753 24059 1 76 0.0022086 162 0 7.38064e+07 0.0333149 359489 7.44853e+07 9.73315e+06 24085 3.66508e+07 0 0.163635 0.990886 0.795436 7.38064e+07 0.00376159 1.60697e+07 8.29446e+06 1.61566e+07 174 1.62073e+07 1.25647e+07 0.00298222 1.62809e+07 50.1134 0.00482631 0.994561 0 50.1349 GTEX-111FC-1126-SM-5GZWU 1 B1 2 pieces, one piece includes large vessel and focus of cartilage, congestion 7.2 Lung Lung 0008952 1080 830 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986343 275350 0.974912 0.989886 0.750556 24385 1 76 0.00255609 150 0 7.05666e+07 0.0245787 380696 7.12875e+07 8.3662e+06 24413 3.50119e+07 0 0.224356 0.989886 0.742965 7.05666e+07 0.00406479 1.57499e+07 1.32083e+07 1.58255e+07 165 1.58948e+07 1.02547e+07 0.00330774 1.59263e+07 50.0494 0.00534029 0.99343 0 50.1197 GTEX-111FC-1326-SM-5N9D9 2 B1 2 pieces, marked congestion/autolysis 5.7 Spleen Spleen 0002106 1100 811 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.985058 994408 0.926752 0.986175 0.714653 24551 1 76 0.00317938 163 0 8.56412e+07 0.0729688 1.12993e+06 8.68418e+07 4.30949e+06 24587 4.25754e+07 0 0.212099 0.986175 0.704773 8.56412e+07 0.0037535 1.79656e+07 4.01386e+07 1.81668e+07 195 1.80846e+07 1.04107e+07 0.00346612 1.81692e+07 50.1166 0.0130113 0.987293 0 50.2785 GTEX-111FC-1426-SM-5N9C7 1 B1 1 piece, adipose tissue (not pancreas as initially designated) 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1104 807 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990545 217167 0.974308 0.99132 0.81865 23507 1 76 0.0028666 211 0 8.65015e+07 0.0254293 653450 8.72589e+07 4.26232e+06 23536 4.30539e+07 0 0.155657 0.99132 0.811545 8.65015e+07 0.0033769 1.90775e+07 9.58338e+06 1.91378e+07 229 1.90633e+07 1.43009e+07 0.00312155 1.92229e+07 50.2085 0.00748864 0.992095 0 50.0789 GTEX-111FC-1926-SM-5GZYC 2 B1 2 pieces, active spermatogenesis 5.9 Testis Testis 0000473 1116 796 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988125 420812 0.925298 0.990914 0.713629 33418 1 76 0.00240112 177 0 8.61358e+07 0.0744034 1.05992e+06 8.69257e+07 1.02556e+07 33482 4.28243e+07 0 0.21167 0.990914 0.707145 8.61358e+07 0.00361006 1.7763e+07 1.47061e+07 1.77533e+07 188 1.78189e+07 1.21118e+07 0.00300389 1.79155e+07 50.1353 0.0121935 0.993703 0 49.9862 GTEX-111FC-2026-SM-5GZYO 2 B1 2 pieces, glands largely sloughed, focal chronic inflammation 5.8 Prostate Prostate 0002367 1121 792 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.984348 359577 0.961373 0.988746 0.762085 25158 1 76 0.00242866 158 0 7.44316e+07 0.0383739 1.16976e+06 7.52788e+07 9.31148e+06 25190 3.69053e+07 0 0.199288 0.988746 0.753508 7.44316e+07 0.00419139 1.62202e+07 9.38072e+06 1.63197e+07 183 1.63451e+07 9.39614e+06 0.00330611 1.6512e+07 50.2539 0.015539 0.993143 0 50.1529 GTEX-111FC-2526-SM-5GZXU 1 B1 6 pieces, includes up to 50% predominantly attached adipose tissue, dermatophytes identified, fibroepithelial polyp 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1135 781 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987374 290086 0.970137 0.990533 0.747564 24608 1 76 0.00243565 133 0 6.58215e+07 0.0296514 453032 6.64506e+07 8.72298e+06 24639 3.27052e+07 0 0.222573 0.990533 0.740486 6.58215e+07 0.00377174 1.44896e+07 7.94554e+06 1.46007e+07 147 1.46374e+07 9.49482e+06 0.00310157 1.46512e+07 50.0237 0.00681758 0.993691 0 50.1908 GTEX-111FC-2926-SM-5GZY7 1 B1 3 pieces, excellent specimen, does include smaller piece of lip, but good composite representation of salivary glands 8.1 Salivary Gland Minor Salivary Gland 0006330 1143 772 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986519 333122 0.97371 0.989345 0.799594 23138 1 76 0.00248384 239 0 6.66612e+07 0.0254896 167273 6.73791e+07 8.13546e+06 23161 3.31201e+07 0 0.174116 0.989345 0.791075 6.66612e+07 0.00388452 1.50657e+07 1.63333e+07 1.50904e+07 171 1.51549e+07 1.17996e+07 0.00318218 1.51884e+07 50.0553 0.00248257 0.992172 0 50.041 GTEX-111FC-3026-SM-5GZYJ 3 B1 2 pieces, marked autolysis, clacified debris/fibrous tissue 6.4 Pituitary Pituitary 0000007 1221 696 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 EXCLUDE 0.986472 278376 0.964725 0.990395 0.831321 24061 1 76 0.00226476 175 0 6.91854e+07 0.0349711 1.59172e+06 6.98564e+07 8.75439e+06 24079 3.43454e+07 0 0.133404 0.990395 0.823336 6.91854e+07 0.00372759 1.52541e+07 6.66689e+06 1.54256e+07 193 1.53965e+07 9.53344e+06 0.00299328 1.5549e+07 50.2465 0.0227856 0.994317 0 50.2796 GTEX-111FC-3126-SM-5GZZ2 1 B1 2 pieces 6.1 Brain Brain - Cortex 0001870 1221 697 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990149 245136 0.964973 0.9929 0.80945 24759 1 76 0.00229111 271 0 9.09096e+07 0.0346958 3.33104e+06 9.15597e+07 1.03857e+07 24789 4.51774e+07 0 0.155523 0.9929 0.803703 9.09096e+07 0.00364384 2.00419e+07 1.04967e+07 2.00589e+07 326 1.99483e+07 1.07704e+07 0.0029656 2.03807e+07 50.5361 0.0363811 0.995651 0 50.0212 GTEX-111FC-3326-SM-5GZYV 2 B1 2 pieces 7.1 Brain Brain - Cerebellum 0002037 1221 697 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987414 382782 0.951522 0.990794 0.738563 23883 1 76 0.00253525 149 0 7.15337e+07 0.0481175 1.16071e+06 7.21984e+07 9.2524e+06 23907 3.55274e+07 0 0.212959 0.990794 0.731763 7.15337e+07 0.00385783 1.55032e+07 1.15944e+07 1.56175e+07 166 1.56856e+07 8.85677e+06 0.00319429 1.56629e+07 49.9638 0.0160766 0.994173 0 50.1835 GTEX-111VG-0004-SM-58Q85 B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111VG-0004-SM-5DWSX B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-111VG-0004-SM-6WBTS B1 Blood Whole Blood 0013756 893 BP-38781 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111VG-0008-SM-5Q5BG B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 1084 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99207 312949 0.978244 0.99401 0.870375 18916 1 76 0.00152469 131 0 5.80011e+07 0.0214341 181354 5.83506e+07 4.60951e+06 18924 2.88884e+07 0 0.107869 0.99401 0.865162 5.80011e+07 0.00237269 1.30595e+07 8.67161e+06 1.30623e+07 128 1.30793e+07 1.53521e+07 0.00194786 1.31586e+07 50.1511 0.003108 0.995949 0 50.0054 GTEX-111VG-0326-SM-5GZX7 1 B1 2 pieces; 1 has 20% fat 6.4 Heart Heart - Atrial Appendage 0006631 1006 951 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.988287 238063 0.979751 0.991944 0.81851 22356 1 76 0.00258903 196 0 7.75035e+07 0.0200514 2.39287e+06 7.81329e+07 9.07601e+06 22371 3.85078e+07 0 0.161241 0.991944 0.811916 7.75035e+07 0.00397898 1.71439e+07 1.54582e+07 1.69857e+07 228 1.70824e+07 8.65615e+06 0.00328144 1.72928e+07 50.306 0.0306257 0.995601 0 49.7683 GTEX-111VG-0526-SM-5N9BW 2 B1 2 pieces; Hashimoto thyroiditis with moderate fibrosis; each has 20% peripheral fat 5.8 Thyroid Thyroid 0002046 1014 943 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.987616 237261 0.959299 0.98842 0.73112 24913 1 76 0.00323683 155 0 7.57861e+07 0.0404014 973319 7.6674e+07 3.83224e+06 24946 3.77052e+07 0 0.228179 0.98842 0.722653 7.57861e+07 0.00381409 1.65616e+07 1.32e+07 1.66863e+07 180 1.65938e+07 8.11138e+06 0.00352523 1.67175e+07 50.1857 0.0126942 0.989224 0 50.1876 GTEX-111VG-0726-SM-5GIDC 2 B1 2 pieces; chronic passive congestion with fibrosis, emphysema; foreign body giant cells consistent with aspiration 5.9 Lung Lung 0008952 1017 940 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.978682 357103 0.970551 0.984162 0.715435 25692 1 76 0.0046108 196 0 1.03195e+08 0.0290362 364534 1.04855e+08 9.68357e+06 25740 5.10606e+07 0 0.255116 0.984162 0.704104 1.03195e+08 0.00586664 2.2601e+07 9.46166e+06 2.27237e+07 212 2.2898e+07 1.44698e+07 0.00523523 2.29753e+07 50.0843 0.00347654 0.989642 0 50.1354 GTEX-111VG-1626-SM-5EGIO 1 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1046 911 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985547 166139 0.974802 0.989807 0.801531 22081 1 76 0.00253427 179 0 6.43711e+07 0.0249527 269931 6.5034e+07 9.37134e+06 22104 3.19737e+07 0 0.173271 0.989807 0.79336 6.43711e+07 0.0058138 1.40218e+07 8.51406e+06 1.40505e+07 149 1.41146e+07 1.06056e+07 0.00416698 1.42125e+07 50.1727 0.00415062 0.994066 0 50.0511 GTEX-111VG-1926-SM-5GIDO 1 B1 2 pieces; Leydig cell hyperplasia 5.8 Testis Testis 0000473 1061 896 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988172 236467 0.91576 0.990416 0.707435 32025 1 76 0.00285109 131 0 6.13051e+07 0.0838976 498003 6.18983e+07 7.44242e+06 32074 3.05093e+07 0 0.208326 0.990416 0.700654 6.13051e+07 0.00354181 1.24564e+07 9.58943e+06 1.24834e+07 117 1.25411e+07 9.90533e+06 0.00319567 1.25235e+07 49.9648 0.0080455 0.992659 0 50.054 GTEX-111VG-2226-SM-5N9DU 3 B1 6 pieces; mucosa=3, muscle=1 5.7 Colon Colon - Transverse 0001157 1064 893 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98815 168260 0.972784 0.989019 0.824944 23446 1 76 0.00303303 163 0 7.53165e+07 0.0268639 1.61655e+06 7.61527e+07 3.54587e+06 23468 3.7483e+07 0 0.14784 0.989019 0.815886 7.53165e+07 0.00359216 1.65633e+07 7.56501e+06 1.66068e+07 202 1.65434e+07 1.02076e+07 0.00331235 1.66924e+07 50.2242 0.0212277 0.98989 0 50.0656 GTEX-111VG-2326-SM-5N9BK 1 B1 2 pieces 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 1083 874 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991617 236764 0.974651 0.992769 0.782505 23999 1 76 0.00304185 169 0 8.56158e+07 0.0250445 326191 8.62394e+07 4.35646e+06 24024 4.26279e+07 0 0.192146 0.992769 0.776847 8.56158e+07 0.0036112 1.88642e+07 8.00887e+06 1.90324e+07 199 1.89728e+07 1.46257e+07 0.00332619 1.90191e+07 50.0609 0.00378239 0.993921 0 50.222 GTEX-111VG-2426-SM-5GZXD 1 B1 6 pieces; well trimmed 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1084 873 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989817 221568 0.973519 0.99262 0.788744 23731 1 76 0.00234094 202 0 7.44497e+07 0.026235 406720 7.50032e+07 9.60134e+06 23761 3.70253e+07 0 0.184776 0.99262 0.782923 7.44497e+07 0.00357381 1.62023e+07 7.91076e+06 1.63096e+07 176 1.63419e+07 1.24111e+07 0.00295563 1.6369e+07 50.0413 0.0054227 0.995423 0 50.165 GTEX-111VG-2526-SM-5GZXP 1 B1 4 pieces: 2 are fat free, 2 with 30-40% fat 6.9 Nerve Nerve - Tibial 0001323 1087 870 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.98941 200416 0.970527 0.99235 0.774488 23775 1 76 0.00235422 159 0 6.92748e+07 0.0291522 247980 6.98088e+07 8.71026e+06 23804 3.44365e+07 0 0.196039 0.99235 0.768563 6.92748e+07 0.00366509 1.52727e+07 7.01318e+06 1.53699e+07 157 1.5401e+07 1.1607e+07 0.00300771 1.54374e+07 50.0589 0.00355228 0.99529 0 50.1586 GTEX-111VG-2626-SM-5GZY2 1 B1 2 pieces; 1 with 10% peripheral fat 8.1 Muscle Muscle - Skeletal 0011907 1088 869 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991756 228882 0.983931 0.994212 0.88262 20210 1 76 0.0020535 201 0 8.29808e+07 0.0157784 526174 8.34638e+07 1.11139e+07 20219 4.13115e+07 0 0.101311 0.994212 0.877511 8.29808e+07 0.00293672 1.79074e+07 9.0881e+06 1.77926e+07 210 1.78462e+07 1.94674e+07 0.00249402 1.80428e+07 50.274 0.00630422 0.996669 0 49.8392 GTEX-111YS-0004-SM-58Q7Y B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-111YS-0004-SM-5DWSS B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-111YS-0004-SM-6WBTN B1 Blood Whole Blood 0013756 -121 BP-38789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-111YS-0006-SM-5NQBE B1 8.2 Blood Whole Blood 0013756 -121 BP-38780 RNA isolation_PAXgene Blood RNA (Manual) 05/08/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.981573 565100 0.965938 0.985108 0.810071 18229 1 76 0.00271236 128 0 7.95187e+07 0.0329545 224915 8.07207e+07 1.11543e+07 18237 3.95001e+07 0 0.155867 0.985108 0.798007 7.95187e+07 0.00586091 1.77504e+07 6.93421e+07 1.80237e+07 148 1.80815e+07 1.79407e+07 0.00428098 1.79763e+07 49.8542 0.00278633 0.988644 0 50.382 GTEX-111YS-0008-SM-5Q5BH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 299 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989266 439623 0.976082 0.993076 0.860144 20183 1 76 0.00150431 147 0 7.06687e+07 0.0235661 259480 7.11614e+07 5.0448e+06 20193 3.51216e+07 0 0.115938 0.993076 0.854189 7.06687e+07 0.00256993 1.57133e+07 1.08286e+07 1.57788e+07 150 1.58414e+07 1.85485e+07 0.00203507 1.59281e+07 50.1365 0.00364636 0.996887 0 50.104 GTEX-111YS-0126-SM-5987T 1 B1 3 fragmented pieces; up to 2.5mm external fat on 2 of the 3 pieces 8.1 Adrenal Gland Adrenal Gland 0002369 101 788 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986212 223266 0.978464 0.99094 0.828669 21741 1 76 0.00275093 153 0 7.18762e+07 0.0212607 1.38842e+06 7.25334e+07 1.58636e+07 21762 3.56979e+07 0 0.149795 0.99094 0.821161 7.18762e+07 0.00646972 1.60453e+07 1.19712e+07 1.56804e+07 174 1.57469e+07 1.03797e+07 0.00460146 1.62688e+07 50.8151 0.0191418 0.995667 0 49.4249 GTEX-111YS-0326-SM-5GZZ3 1 B1 2 pieces, 1 with 50% external fat; hypertrophied myofibers 8.5 Heart Heart - Atrial Appendage 0006631 120 769 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987427 263296 0.982231 0.990372 0.836055 20649 1 76 0.00216987 161 0 7.24214e+07 0.0174988 1.66259e+06 7.31255e+07 8.41441e+06 20663 3.59623e+07 0 0.146176 0.990372 0.828006 7.24214e+07 0.0037906 1.54162e+07 1.90624e+07 1.54679e+07 190 1.53104e+07 1.14008e+07 0.00297783 1.57638e+07 50.7295 0.0227362 0.993318 0 50.0837 GTEX-111YS-0426-SM-5987O 1 B1 2 small irregular pieces (3x4 & 9x4mm) 8 Heart Heart - Left Ventricle 0006566 124 765 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.988241 242058 0.984563 0.991696 0.848819 20100 1 76 0.00265771 195 0 7.9992e+07 0.0152273 1.62036e+06 8.06618e+07 1.43258e+07 20111 3.97851e+07 0 0.135743 0.991696 0.84177 7.9992e+07 0.00573418 1.78214e+07 2.34339e+07 1.70843e+07 248 1.70527e+07 1.11808e+07 0.00419058 1.80379e+07 51.4037 0.0200882 0.995151 0 48.9441 GTEX-111YS-0526-SM-5GZXJ 1 B1 6 pieces; up to 0.7mm adventitial fat 7.9 Blood Vessel Artery - Aorta 0001496 128 761 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.985152 427352 0.970772 0.989239 0.848449 20785 1 76 0.00211753 137 0 6.24099e+07 0.028817 134238 6.30888e+07 7.98078e+06 20795 3.09755e+07 0 0.122323 0.989239 0.839319 6.24099e+07 0.00387056 1.34344e+07 9.50538e+06 1.35305e+07 150 1.35725e+07 1.231e+07 0.00299042 1.36433e+07 50.13 0.00212776 0.993326 0 50.1781 GTEX-111YS-0626-SM-5GZXV 1 B1 2 small, irregular, fragmented pieces (7x5 & 5x5mm) 8.1 Lung Lung 0008952 133 756 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.990432 250685 0.97595 0.993117 0.822131 23464 1 76 0.00225066 204 0 7.85997e+07 0.0236282 299794 7.91445e+07 1.04561e+07 23491 3.91023e+07 0 0.153818 0.993117 0.816472 7.85997e+07 0.00326642 1.74598e+07 6.50254e+06 1.7533e+07 207 1.7576e+07 1.43191e+07 0.00275717 1.76208e+07 50.0636 0.00378793 0.995802 0 50.1047 GTEX-111YS-0726-SM-5GZY8 1 B1 3 small, irregular, fragmented pieces; nodular; smallest piece is largely fat and fibrous stroma 6.4 Thyroid Thyroid 0002046 137 752 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.987943 277476 0.968705 0.991626 0.749333 23810 1 76 0.00225897 138 0 6.92371e+07 0.0310365 323235 6.98217e+07 9.28865e+06 23841 3.43987e+07 0 0.219372 0.991626 0.743058 6.92371e+07 0.00360194 1.50893e+07 6.89711e+06 1.51953e+07 156 1.52293e+07 9.97522e+06 0.00292796 1.52959e+07 50.109 0.00462943 0.99531 0 50.1749 GTEX-111YS-0826-SM-5GZYK 1 B1 6 pieces; all muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 143 746 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989365 219409 0.97816 0.992712 0.830223 21716 1 76 0.00215422 135 0 6.69668e+07 0.0215227 464279 6.74585e+07 8.453e+06 21735 3.32964e+07 0 0.147937 0.992712 0.824172 6.69668e+07 0.00331924 1.4579e+07 6.86293e+06 1.4639e+07 164 1.46485e+07 1.14806e+07 0.00273477 1.47838e+07 50.2298 0.00688244 0.99606 0 50.1027 GTEX-111YS-0926-SM-5EGGI 1 B1 6 pieces, all mucosa 9.7 Esophagus Esophagus - Mucosa 0006920 147 742 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983602 238033 0.977702 0.988212 0.841088 21898 1 76 0.00234604 145 0 6.80981e+07 0.0218935 232264 6.89104e+07 1.07388e+07 21909 3.38125e+07 0 0.136614 0.988212 0.831174 6.80981e+07 0.00532311 1.53579e+07 1.16814e+07 1.54451e+07 149 1.55403e+07 1.43936e+07 0.00382763 1.55685e+07 50.0454 0.00337052 0.992823 0 50.1415 GTEX-111YS-1026-SM-5GZYE 1 B1 6 small pieces of muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 148 741 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.991642 225759 0.979138 0.993988 0.844737 21230 1 76 0.00208524 215 0 7.66952e+07 0.0205058 537242 7.7159e+07 9.53065e+06 21243 3.81714e+07 0 0.134401 0.993988 0.839658 7.66952e+07 0.00308594 1.66276e+07 7.46658e+06 1.66785e+07 215 1.66762e+07 1.37476e+07 0.00258441 1.68021e+07 50.188 0.00696279 0.996334 0 50.0764 GTEX-111YS-1126-SM-5GZYQ 1 B1 6 pieces, well preserved mucosa and muscularis 6.4 Stomach Stomach 0000945 151 738 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.984822 171579 0.981572 0.988188 0.844279 21354 1 76 0.00211332 261 0 6.39172e+07 0.0181074 716025 6.46812e+07 7.80886e+06 21364 3.17623e+07 0 0.137293 0.988188 0.834307 6.39172e+07 0.00368239 1.46424e+07 5.60407e+07 1.46713e+07 186 1.46787e+07 1.48048e+07 0.00289518 1.4847e+07 50.285 0.0110701 0.991555 0 50.0493 GTEX-111YS-1226-SM-5EGGJ 1 B1 2 somewhat fragmented pieces 6.8 Pancreas Pancreas 0001150 154 735 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984299 189035 0.97993 0.989304 0.859829 20863 1 76 0.00248968 95 0 6.77759e+07 0.0198148 227322 6.85087e+07 1.09267e+07 20876 3.36443e+07 0 0.120101 0.989304 0.850632 6.77759e+07 0.00567461 1.55536e+07 2.14648e+07 1.56731e+07 109 1.57045e+07 2.03565e+07 0.00407409 1.58585e+07 50.244 0.00331815 0.994309 0 50.1913 GTEX-111YS-1326-SM-5EGGK 0 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 156 733 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986992 183244 0.978765 0.991398 0.836041 21863 1 76 0.00224036 164 0 7.22957e+07 0.0209369 463725 7.2923e+07 1.07118e+07 21876 3.59097e+07 0 0.142725 0.991398 0.828849 7.22957e+07 0.005466 1.59168e+07 7.68051e+06 1.59419e+07 181 1.59776e+07 1.24026e+07 0.00384602 1.61787e+07 50.3128 0.0063591 0.995803 0 50.0394 GTEX-111YS-1426-SM-5GID8 0 B1 6 pieces of well preserved mucosa with several lymphoid nodules in the 3 largest pieces (marked) 7 Small Intestine Small Intestine - Terminal Ileum 0001211 158 731 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989536 177095 0.974669 0.991747 0.8186 21371 1 76 0.00301279 171 0 7.05849e+07 0.024938 1.01878e+06 7.11722e+07 8.85453e+06 21387 3.51380e+07 0 0.156069 0.991747 0.811844 7.05849e+07 0.00358853 1.56946e+07 1.26722e+07 1.5741e+07 197 1.56914e+07 9.76906e+06 0.00330002 1.589e+07 50.3144 0.0143143 0.993959 0 50.0738 GTEX-111YS-1526-SM-5GZYW 0 B1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 163 726 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.986973 264566 0.972145 0.990399 0.814304 22997 1 76 0.00224498 159 0 6.35299e+07 0.0276326 415862 6.41458e+07 8.37761e+06 23014 3.15749e+07 0 0.15784 0.990399 0.806486 6.35299e+07 0.00354367 1.3916e+07 7.50297e+06 1.40251e+07 151 1.40504e+07 1.12046e+07 0.00289208 1.41013e+07 50.0903 0.00648308 0.993824 0 50.1952 GTEX-111YS-1626-SM-5GZZ9 1 B1 6 pieces, 4 full thickness, 2 without mucosa 7.8 Colon Colon - Transverse 0001157 168 721 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.989661 247548 0.976017 0.992581 0.826617 21867 1 76 0.00211476 161 0 6.85467e+07 0.0236548 414492 6.90591e+07 8.80253e+06 21887 3.40860e+07 0 0.1494 0.992581 0.820485 6.85467e+07 0.00329569 1.49185e+07 7.10625e+06 1.49285e+07 166 1.49506e+07 1.20372e+07 0.00270349 1.50848e+07 50.2234 0.00600199 0.995501 0 50.0168 GTEX-111YS-1726-SM-5GIED 1 B1 2 pieces; glandular hyperplasia 6.3 Prostate Prostate 0002367 179 710 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989478 234680 0.969914 0.992026 0.763299 23619 1 76 0.00272966 123 0 6.14685e+07 0.0298548 305261 6.19625e+07 7.66204e+06 23648 3.05764e+07 0 0.206615 0.992026 0.757213 6.14685e+07 0.00340165 1.34872e+07 6.38604e+06 1.35141e+07 141 1.353e+07 8.62591e+06 0.00306479 1.36214e+07 50.1682 0.00492654 0.994575 0 50.0498 GTEX-111YS-1826-SM-5GIEP 0 B1 6 pieces; muscularis (target) with up to 1 mm external fat 7.8 Colon Colon - Sigmoid 0001159 182 707 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989401 214042 0.975493 0.99245 0.83029 21488 1 76 0.00257376 141 0 6.28188e+07 0.0241792 393772 6.32966e+07 8.04969e+06 21503 3.1242e+07 0 0.145203 0.99245 0.824021 6.28188e+07 0.00321704 1.36667e+07 6.10714e+06 1.36929e+07 147 1.37276e+07 1.09685e+07 0.00289441 1.38115e+07 50.1524 0.00622106 0.995499 0 50.0479 GTEX-111YS-1926-SM-5GICC 0 B1 2 pieces; stromal and ductal gynecomastoid hyperplasia; about 50% fat 7.2 Breast Breast - Mammary Tissue 0008367 188 701 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989692 208577 0.968128 0.992355 0.773188 24558 1 76 0.00264646 172 0 8.23943e+07 0.0315794 363339 8.3029e+07 1.07096e+07 24599 4.09918e+07 0 0.19494 0.992355 0.767277 8.23943e+07 0.0034012 1.80617e+07 8.23065e+06 1.82425e+07 195 1.82519e+07 1.29889e+07 0.00302282 1.82625e+07 50.0145 0.00437605 0.995018 0 50.249 GTEX-111YS-2026-SM-5EGGL 0 B1 2 pieces; spermatogenesis 6.8 Testis Testis 0000473 189 700 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985318 253033 0.926817 0.989435 0.723004 32311 1 76 0.00236531 130 0 6.92451e+07 0.0728769 601648 6.99845e+07 9.70163e+06 32360 3.43966e+07 0 0.203813 0.989435 0.715366 6.92451e+07 0.00535016 1.4351e+07 1.07948e+07 1.43696e+07 138 1.44604e+07 1.1099e+07 0.00385152 1.45107e+07 50.0868 0.00859688 0.993553 0 50.0325 GTEX-111YS-2126-SM-5EGGM 0 B1 2 pieces; 50% internal edematous stroma and fat 7.2 Nerve Nerve - Tibial 0001323 289 600 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980099 162181 0.965839 0.985818 0.731066 23488 1 76 0.00246162 140 0 6.14178e+07 0.0339015 222732 6.23014e+07 9.96449e+06 23522 3.04443e+07 0 0.234774 0.985818 0.720698 6.14178e+07 0.00587615 1.34249e+07 5.94265e+06 1.3557e+07 133 1.36457e+07 9.00653e+06 0.00415898 1.36707e+07 50.0457 0.00357507 0.991537 0 50.2448 GTEX-111YS-2226-SM-5987P 1 B1 2 pieces; extensive medial calcification (marked); no intimal plaques 7.8 Blood Vessel Artery - Tibial 0007610 292 597 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983152 253878 0.976322 0.989612 0.846981 20927 1 76 0.00250769 136 0 6.48482e+07 0.0232456 197829 6.55289e+07 1.54025e+07 20936 3.21379e+07 0 0.129341 0.989612 0.838183 6.48482e+07 0.00735696 1.39237e+07 6.71898e+06 1.40148e+07 141 1.41446e+07 1.28753e+07 0.0049165 1.41844e+07 50.0702 0.00301896 0.996073 0 50.1629 GTEX-111YS-2326-SM-5987L 0 B1 2 pieces 7.1 Muscle Muscle - Skeletal 0011907 294 595 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985609 253081 0.982708 0.990696 0.877478 20121 1 76 0.00242926 142 0 7.26910e+07 0.0170065 1.2682e+06 7.33737e+07 1.57549e+07 20128 3.60905e+07 0 0.105229 0.990696 0.869314 7.26910e+07 0.00630527 1.59868e+07 9.38516e+06 1.57339e+07 164 1.5832e+07 1.52228e+07 0.00435731 1.62244e+07 50.6121 0.0172841 0.995784 0 49.6013 GTEX-111YS-2426-SM-5GZZQ 0 B1 3 small irregular pieces 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 296 593 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990443 250797 0.974452 0.99289 0.799713 21965 1 76 0.0021321 159 0 6.82595e+07 0.0252337 457318 6.87482e+07 7.72479e+06 21987 3.3965e+07 0 0.174739 0.99289 0.794027 6.82595e+07 0.00339647 1.50473e+07 9.3527e+06 1.5104e+07 165 1.51442e+07 1.09416e+07 0.00276272 1.51718e+07 50.0454 0.00665207 0.995338 0 50.0941 GTEX-1122O-0003-SM-5Q5DL B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -77 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991067 1.0695e+06 0.962693 0.993511 0.802731 22185 1 76 0.00219526 217 0 9.45262e+07 0.0369627 461442 9.51436e+07 1.46674e+07 22216 4.70473e+07 0 0.159962 0.993511 0.797522 9.45262e+07 0.00332494 2.08341e+07 1.603e+07 2.09383e+07 235 2.09902e+07 2.13073e+07 0.00275871 2.10055e+07 50.0182 0.00484995 0.995954 0 50.1247 GTEX-1122O-0004-SM-58Q7O B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1122O-0004-SM-5DWSJ B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1122O-0004-SM-6WBTE B1 Blood Whole Blood 0013756 -77 BP-38824 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1122O-0005-SM-5O99J B1 7.6 Blood Whole Blood 0013756 -77 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986466 912057 0.944916 0.990744 0.777156 18928 1 76 0.00230212 124 0 7.1748e+07 0.0545957 207142 7.24183e+07 1.04949e+07 18944 3.56203e+07 0 0.16776 0.990744 0.769962 7.1748e+07 0.00416304 1.53565e+07 4.43056e+07 1.55623e+07 142 1.56396e+07 1.38583e+07 0.00322856 1.56031e+07 49.9416 0.00286035 0.995023 0 50.3328 GTEX-1122O-0008-SM-5QGR2 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 128 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994467 223519 0.982928 0.995624 0.887028 18244 1 76 0.00157106 138 0 5.72119e+07 0.0167516 97497 5.74634e+07 4.05372e+06 18248 2.85207e+07 0 0.0958995 0.995624 0.883146 5.72119e+07 0.00232476 1.29548e+07 5.9646e+06 1.30058e+07 127 1.30175e+07 1.55492e+07 0.00194747 1.30129e+07 49.9913 0.00169668 0.996781 0 50.0983 GTEX-1122O-0126-SM-5GICA 0 B1 2 pieces, patchy bronchopneumonia 7.6 Lung Lung 0008952 68 935 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989996 207253 0.974001 0.992561 0.826045 23407 1 76 0.00272401 164 0 7.47401e+07 0.0256564 309042 7.53003e+07 1.01469e+07 23430 3.71922e+07 0 0.147957 0.992561 0.8199 7.47401e+07 0.00326926 1.65239e+07 6.80277e+06 1.6644e+07 194 1.66818e+07 1.31227e+07 0.00299593 1.66689e+07 49.9807 0.00410413 0.995127 0 50.181 GTEX-1122O-0226-SM-5N9DA 0 B1 2 pieces, some nodular change 6.2 Thyroid Thyroid 0002046 51 952 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99063 197371 0.970389 0.991624 0.786171 23007 1 76 0.00291743 158 0 7.26916e+07 0.0294171 469295 7.33056e+07 3.25426e+06 23032 3.62041e+07 0 0.184218 0.991624 0.779586 7.26916e+07 0.00344091 1.59165e+07 7.56613e+06 1.60384e+07 179 1.59063e+07 9.69051e+06 0.00317891 1.61169e+07 50.3289 0.0064019 0.992617 0 50.1907 GTEX-1122O-0326-SM-5H124 0 B1 2 pieces, one is ~30% adipose tissue 8.7 Adrenal Gland Adrenal Gland 0002369 38 965 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990778 310502 0.97631 0.993351 0.821705 23920 1 76 0.00230703 271 0 9.43864e+07 0.0233271 1.02398e+06 9.50182e+07 1.29775e+07 23948 4.69722e+07 0 0.154605 0.993351 0.816242 9.43864e+07 0.00317155 2.0873e+07 1.24889e+07 2.08626e+07 274 2.09495e+07 1.5479e+07 0.00273817 2.10052e+07 50.0663 0.0107766 0.995925 0 49.9875 GTEX-1122O-0426-SM-5H12G 0 B1 2 pieces, both with attachment of adipose tissue and nerve up to 1.45mm thick, atherosclerosis with compromise of the lumen ~40% 7.7 Blood Vessel Artery - Coronary 0001621 63 940 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990352 196630 0.976134 0.993079 0.850295 21204 1 76 0.00193909 143 0 6.82569e+07 0.0234723 322122 6.87326e+07 8.65984e+06 21220 3.39574e+07 0 0.125839 0.993079 0.84441 6.82569e+07 0.00309214 1.45213e+07 5.39442e+06 1.46944e+07 160 1.46907e+07 1.39679e+07 0.00251403 1.47031e+07 50.021 0.0046866 0.995806 0 50.2963 GTEX-1122O-0526-SM-5N9DM 0 B1 2 pieces 7.8 Spleen Spleen 0002106 46 957 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991574 198578 0.964085 0.992349 0.771153 24518 1 76 0.00325312 161 0 8.36309e+07 0.0348934 359502 8.42757e+07 3.91559e+06 24551 4.16329e+07 0 0.192933 0.992349 0.765253 8.36309e+07 0.00368861 1.83965e+07 9.51827e+06 1.84768e+07 202 1.84495e+07 1.30529e+07 0.00347069 1.84878e+07 50.0519 0.00426579 0.993124 0 50.1089 GTEX-1122O-0626-SM-5N9B9 0 B1 2 pieces, 30-50% fat, interstitial fibrosis 8.6 Heart Heart - Atrial Appendage 0006631 60 943 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992927 244989 0.976755 0.993655 0.831393 21671 1 76 0.00284322 199 0 8.51618e+07 0.0229706 1.49421e+06 8.57056e+07 3.99975e+06 21689 4.24402e+07 0 0.145362 0.993655 0.826118 8.51618e+07 0.00328089 1.82444e+07 1.6399e+07 1.8368e+07 236 1.82115e+07 1.4677e+07 0.0030619 1.8466e+07 50.3469 0.0174342 0.994383 0 50.1687 GTEX-1122O-0726-SM-5GIEV 1 B1 2 pieces, minimal attached and internal fat 6 Pancreas Pancreas 0001150 55 948 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991492 284734 0.975735 0.993507 0.838041 22174 1 76 0.00286843 127 0 9.55623e+07 0.0239078 261116 9.61868e+07 1.14208e+07 22197 4.75741e+07 0 0.137694 0.993507 0.8326 9.55623e+07 0.00347573 2.17756e+07 2.46343e+07 2.20764e+07 161 2.20292e+07 2.61505e+07 0.00317146 2.20089e+07 49.9769 0.00271468 0.995522 0 50.343 GTEX-1122O-0826-SM-5GICV 0 B1 2 pieces, both with attached adipose tissue (5-10% on one, 25% on second) 8 Heart Heart - Left Ventricle 0006566 62 941 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991328 176137 0.982864 0.993407 0.851392 20223 1 76 0.00290912 195 0 7.07418e+07 0.0169145 1.43384e+06 7.12113e+07 8.85436e+06 20230 3.52319e+07 0 0.131471 0.993407 0.845779 7.07418e+07 0.00343361 1.55122e+07 1.77662e+07 1.53069e+07 203 1.5228e+07 1.09743e+07 0.00317082 1.57178e+07 50.7914 0.0201349 0.995486 0 49.6669 GTEX-1122O-0926-SM-5N9C9 0 B1 2 pieces, focal perivascular collection of lymphocytes 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 93 910 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.992568 206359 0.973996 0.993597 0.838529 21380 1 76 0.00284954 160 0 7.53652e+07 0.0256724 742097 7.58508e+07 3.68956e+06 21391 3.75422e+07 0 0.135467 0.993597 0.83316 7.53652e+07 0.00350215 1.63552e+07 1.0471e+07 1.65428e+07 202 1.64104e+07 1.1268e+07 0.00317551 1.65645e+07 50.2337 0.00978364 0.994626 0 50.2852 GTEX-1122O-0926-SM-9YFLC 0 B1 2 pieces, focal perivascular collection of lymphocytes 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 93 910 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.993504 231037 0.976414 0.995017 0.841357 21772 1 76 0.00253773 204 0 8.20962e+07 0.0233478 779247 8.25073e+07 5.20863e+06 21787 4.09231e+07 0 0.135056 0.995017 0.837165 8.20962e+07 0.00345107 1.79864e+07 9.41984e+06 1.81584e+07 251 1.80799e+07 1.30326e+07 0.00299371 1.81816e+07 50.1401 0.00944458 0.996529 0 50.2381 GTEX-1122O-1026-SM-9WYSF 0 B1 6 pieces, well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 94 909 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992994 228166 0.968832 0.994594 0.78811 22690 1 76 0.00243091 197 0 7.93505e+07 0.0309985 525716 7.97818e+07 5.283e+06 22713 3.95338e+07 0 0.180722 0.994594 0.783849 7.93505e+07 0.00454839 1.72891e+07 8.86082e+06 1.74724e+07 192 1.74489e+07 1.25898e+07 0.00348795 1.74377e+07 49.9839 0.00658942 0.996194 0 50.2636 GTEX-1122O-1126-SM-5NQ8X 0 B1 7 pieces 7.1 Blood Vessel Artery - Aorta 0001496 64 939 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.993015 171786 0.977001 0.994572 0.865349 19854 1 76 0.00181538 127 0 5.74967e+07 0.0226042 147349 5.78105e+07 4.32817e+06 19860 2.86166e+07 0 0.111652 0.994572 0.860651 5.74967e+07 0.00275927 1.24818e+07 4.45191e+06 1.2539e+07 142 1.24813e+07 1.18121e+07 0.00228659 1.26305e+07 50.2971 0.00254883 0.996129 0 50.1143 GTEX-1122O-1226-SM-5H113 0 B1 2 pieces, predominantly fatty with 10-20% fibrous stroma and ductal/lobular elements, microcalciifcations 6.7 Breast Breast - Mammary Tissue 0008367 93 910 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990493 226915 0.973776 0.992659 0.801922 24127 1 76 0.00218512 207 0 8.09968e+07 0.0257231 378065 8.15958e+07 9.87819e+06 24147 4.03093e+07 0 0.171855 0.992659 0.796035 8.09968e+07 0.00321429 1.78112e+07 8.07477e+06 1.79698e+07 207 1.79636e+07 1.35387e+07 0.00269858 1.79821e+07 50.0258 0.00463339 0.994826 0 50.2215 GTEX-1122O-1326-SM-5H11F 0 B1 6 pieces, good specimen, well preserved, well trimmed, good representation of lymphoid tissue 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 103 900 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989787 240390 0.973952 0.992099 0.800074 22732 1 76 0.00259958 177 0 7.43613e+07 0.0256049 785818 7.49535e+07 9.37796e+06 22755 3.70046e+07 0 0.173878 0.992099 0.793752 7.43613e+07 0.00378479 1.65479e+07 1.09126e+07 1.65867e+07 190 1.65807e+07 1.07388e+07 0.0031908 1.67164e+07 50.2037 0.0104841 0.99441 0 50.0585 GTEX-1122O-1426-SM-5H11R 0 B1 6 pieces, well trimmed 7.2 Colon Colon - Sigmoid 0001159 106 897 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991474 268009 0.974955 0.993701 0.816593 22839 1 76 0.00204931 206 0 8.07388e+07 0.0248099 452708 8.12507e+07 9.74939e+06 22862 4.01892e+07 0 0.158362 0.993701 0.811449 8.07388e+07 0.00311188 1.75038e+07 7.0907e+06 1.76506e+07 206 1.76363e+07 1.34422e+07 0.0025794 1.76903e+07 50.0765 0.00557175 0.995927 0 50.2088 GTEX-1122O-1526-SM-5N9CL 1 B1 6 pieces, predominantly mucosa and submucosa, few with attached portion of muscularis 7.8 Colon Colon - Transverse 0001157 111 892 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991552 190647 0.972045 0.992618 0.801453 22634 1 76 0.00313044 197 0 7.04263e+07 0.0275368 1.14169e+06 7.095e+07 3.67084e+06 22657 3.50743e+07 0 0.170592 0.992618 0.795537 7.04263e+07 0.00362658 1.56093e+07 9.97589e+06 1.57085e+07 171 1.56426e+07 1.06439e+07 0.00337824 1.57434e+07 50.1605 0.0160915 0.993684 0 50.1584 GTEX-1122O-1626-SM-5N9CX 1 B1 6 pieces, well trimmed, minute focus of squamous epithelium 8.3 Esophagus Esophagus - Muscularis 0004648 116 887 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993113 185709 0.978129 0.993861 0.838444 21374 1 76 0.00271942 174 0 7.52063e+07 0.0215413 479033 7.56709e+07 3.55529e+06 21392 3.74781e+07 0 0.139685 0.993861 0.833297 7.52063e+07 0.00316601 1.62015e+07 6.0328e+06 1.63072e+07 183 1.62254e+07 1.38323e+07 0.00294255 1.63376e+07 50.1722 0.00633048 0.994608 0 50.1625 GTEX-1122O-1726-SM-5GICM 0 B1 6 pieces 8 Esophagus Esophagus - Mucosa 0006920 118 885 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.989926 208207 0.976614 0.991877 0.834785 21417 1 76 0.00290464 169 0 7.15011e+07 0.0228934 389864 7.20867e+07 8.80921e+06 21432 3.56025e+07 0 0.141829 0.991877 0.828004 7.15011e+07 0.00340962 1.60386e+07 1.12965e+07 1.60355e+07 168 1.60574e+07 1.3959e+07 0.00315663 1.61494e+07 50.1427 0.00540826 0.993827 0 49.9951 GTEX-1122O-1826-SM-5EGIP 0 B1 6 pieces, well trimmed, few submucosal glands 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 119 884 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985626 177547 0.973686 0.989981 0.813688 21759 1 76 0.00228893 144 0 6.12567e+07 0.0260382 366145 6.18766e+07 9.44206e+06 21779 3.04262e+07 0 0.159998 0.989981 0.805536 6.12567e+07 0.00526249 1.32785e+07 5.87592e+06 1.33476e+07 141 1.33662e+07 1.04216e+07 0.00376917 1.35103e+07 50.2681 0.00591734 0.994336 0 50.1297 GTEX-1122O-1926-SM-5EGIQ 1 B1 6 pieces, mucosa and submucosa 6.5 Stomach Stomach 0000945 123 880 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.977454 153185 0.980666 0.982983 0.85076 21247 1 76 0.00255349 282 0 5.99662e+07 0.0189288 865151 6.10043e+07 1.01822e+07 21257 2.97409e+07 0 0.129906 0.982983 0.836283 5.99662e+07 0.00603222 1.3686e+07 6.40967e+07 1.37704e+07 195 1.3775e+07 1.30443e+07 0.00428307 1.39962e+07 50.3982 0.0141818 0.988512 0 50.1537 GTEX-1122O-2026-SM-5NQ91 0 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 126 877 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 EXCLUDE 0.993137 181433 0.974009 0.994586 0.801538 22458 1 76 0.00203331 210 0 8.04871e+07 0.0257492 628967 8.09252e+07 5.62624e+06 22484 4.00809e+07 0 0.172471 0.994586 0.797198 8.04871e+07 0.00295568 1.7631e+07 8.623e+06 1.77676e+07 218 1.76864e+07 1.18722e+07 0.00249382 1.7827e+07 50.198 0.0077722 0.996034 0 50.193 GTEX-1122O-2026-SM-9YFMG 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 126 877 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.9926 342294 0.97453 0.994454 0.810293 24021 1 76 0.00299046 378 0 1.25677e+08 0.025219 1.16464e+06 1.26378e+08 1.4482e+07 24053 6.2613e+07 0 0.164237 0.994454 0.805798 1.25677e+08 0.00411436 2.75947e+07 1.3424e+07 2.77528e+07 363 2.77159e+07 1.91536e+07 0.00355136 2.78531e+07 50.1235 0.00921553 0.996308 0 50.1428 GTEX-1122O-2126-SM-5EGIR 0 B1 6 pieces, includes 10-30% attached and internal fat, squamous epithelium measures 36 to 45 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 128 875 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981712 190754 0.97417 0.987252 0.872227 21359 1 76 0.00230753 168 0 5.98722e+07 0.0256446 276523 6.06453e+07 9.14466e+06 21369 2.96913e+07 0 0.101944 0.987252 0.861107 5.98722e+07 0.00596013 1.2838e+07 6.9178e+06 1.30367e+07 155 1.30794e+07 1.0942e+07 0.00412358 1.31155e+07 50.069 0.00455968 0.992791 0 50.3838 GTEX-1122O-2326-SM-9YFL9 1 B1 4 pieces, intimal thickening/early atherosclerotic change 6.7 Blood Vessel Artery - Tibial 0007610 130 873 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993045 124502 0.975554 0.994819 0.845436 19918 1 76 0.00233418 121 0 5.25689e+07 0.0241014 244120 5.28426e+07 1.93892e+06 19926 2.61844e+07 0 0.130118 0.994819 0.841056 5.25689e+07 0.00359675 1.12697e+07 3.60957e+06 1.1382e+07 130 1.13568e+07 9.98995e+06 0.00296434 1.13859e+07 50.0641 0.00461975 0.996593 0 50.2479 GTEX-1122O-2426-SM-5GIDN 1 B1 2 pieces 7 Muscle Muscle - Skeletal 0011907 131 872 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991915 182569 0.980911 0.994101 0.869498 19070 1 76 0.00254273 149 0 6.2735e+07 0.0188662 716038 6.31072e+07 7.88763e+06 19077 3.1241e+07 0 0.111413 0.994101 0.864369 6.2735e+07 0.00300344 1.37393e+07 8.19806e+06 1.37822e+07 154 1.37794e+07 1.24223e+07 0.00277258 1.38703e+07 50.1643 0.0113464 0.996288 0 50.078 GTEX-1128S-0001-SM-58Q96 B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1128S-0001-SM-5DWTV B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-1128S-0001-SM-6WBUH B1 Blood Whole Blood 0013756 783 BP-38828 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1128S-0005-SM-5P9HI B1 6.7 Blood Whole Blood 0013756 783 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.973177 1.38113e+06 0.946127 0.973843 0.709849 20836 1 76 0.00365126 143 0 1.13818e+08 0.0529809 273590 1.16875e+08 4.1737e+06 20867 5.66273e+07 0 0.236279 0.973843 0.691281 1.13818e+08 0.00430654 2.51302e+07 1.52046e+08 2.57111e+07 169 2.56061e+07 2.37105e+07 0.00397868 2.53583e+07 49.7569 0.00234088 0.974509 0 50.5713 GTEX-1128S-0008-SM-5Q5DP B1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 886 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991967 400527 0.975758 0.994541 0.866308 21271 1 76 0.00191287 218 0 9.32394e+07 0.023907 464741 9.37512e+07 1.30806e+07 21287 4.64158e+07 0 0.10945 0.994541 0.861579 9.32394e+07 0.0031809 2.07279e+07 1.58683e+07 2.08707e+07 238 2.09017e+07 2.42315e+07 0.00254525 2.09363e+07 50.0413 0.00495718 0.997116 0 50.1717 GTEX-1128S-0126-SM-5H12S 1 B1 2 pieces, no abnormalities noted 6.6 Thyroid Thyroid 0002046 820 1025 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990824 208173 0.966904 0.992866 0.714929 23903 1 76 0.00220062 134 0 6.98093e+07 0.0328288 177021 7.03109e+07 7.79532e+06 23940 3.47361e+07 0 0.251975 0.992866 0.709829 6.98093e+07 0.00322143 1.5288e+07 6.37357e+06 1.53481e+07 147 1.53902e+07 1.03511e+07 0.00270998 1.53821e+07 49.9868 0.00251769 0.994907 0 50.098 GTEX-1128S-0326-SM-5GZZF 1 B1 6 pieces, congested serosa up to ~0.5mm, rep delineated 6 Blood Vessel Artery - Aorta 0001496 828 1017 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986297 269426 0.972698 0.989211 0.776625 22774 1 76 0.00223839 154 0 7.79758e+07 0.0268661 196192 7.88263e+07 1.00472e+07 22800 3.87378e+07 0 0.196073 0.989211 0.768246 7.79758e+07 0.00363426 1.68025e+07 7.34059e+06 1.69204e+07 172 1.69747e+07 1.36119e+07 0.00293427 1.69718e+07 49.9958 0.00248892 0.992126 0 50.1748 GTEX-1128S-0726-SM-5N9D6 2 B1 2 pieces, diffuse moderate-marked acute/chronic pneumonitis/congestion 7.6 Lung Lung 0008952 840 1005 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99003 166676 0.973528 0.991147 0.728068 23720 1 76 0.00317108 137 0 7.48802e+07 0.0261304 378516 7.55491e+07 3.63865e+06 23763 3.72624e+07 0 0.24546 0.991147 0.721622 7.48802e+07 0.00369926 1.65702e+07 7.66337e+06 1.66037e+07 152 1.65686e+07 1.14458e+07 0.00343487 1.66863e+07 50.177 0.0050102 0.992263 0 50.0506 GTEX-1128S-0826-SM-5GZZI 1 B1 2 pieces, up to 50% interstital fat, rep delineated; Islets well visualized, rep delineated. Some areas approach score 2/saponification/autolysis 6.2 Pancreas Pancreas 0001150 842 1003 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989556 240872 0.978437 0.992468 0.82607 21236 1 76 0.00223995 131 0 8.21893e+07 0.0213993 403444 8.2813e+07 1.14632e+07 21256 4.08889e+07 0 0.152367 0.992468 0.819848 8.21893e+07 0.00334251 1.87495e+07 1.57533e+07 1.89162e+07 144 1.89867e+07 2.10761e+07 0.00278961 1.892e+07 49.912 0.00487175 0.995381 0 50.2213 GTEX-1128S-0926-SM-5GZZU 1 B1 2 pieces, ~5-10% fibrous/vascular tissue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 844 1001 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991152 224410 0.977791 0.993146 0.822412 22075 1 76 0.00219188 168 0 7.90924e+07 0.0219261 141927 7.96382e+07 9.49146e+06 22094 3.93799e+07 0 0.155379 0.993146 0.816775 7.90924e+07 0.00321314 1.7463e+07 8.87203e+06 1.7673e+07 192 1.76946e+07 1.50612e+07 0.00270149 1.75965e+07 49.861 0.00178215 0.99514 0 50.2987 GTEX-1128S-1426-SM-5N9EF 3 B1 6 pieces, near- total autolysis/mucosa completely sloughed 5.7 Esophagus Esophagus - Mucosa 0006920 859 986 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.988874 299710 0.979422 0.990388 0.81793 22617 1 76 0.00432693 266 0 9.42858e+07 0.0203758 4.18941e+06 9.52009e+07 4.32795e+06 22638 4.68652e+07 0 0.161492 0.990388 0.810068 9.42858e+07 0.00444808 2.07368e+07 1.49431e+07 2.08054e+07 299 2.07127e+07 1.18434e+07 0.00438741 2.09623e+07 50.2994 0.044006 0.991902 0 50.0825 GTEX-1128S-1626-SM-5H12O 3 B1 6 pieces, epithelial component of mucosa completely sloughed, some lamina propria elements remain 5.8 Colon Colon - Transverse 0001157 865 980 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987769 179847 0.97414 0.990728 0.804111 23356 1 76 0.00245785 143 0 6.47606e+07 0.0251292 491695 6.53667e+07 8.18297e+06 23379 3.21764e+07 0 0.170028 0.990728 0.796655 6.47606e+07 0.00386952 1.43729e+07 6.79163e+06 1.43743e+07 159 1.43855e+07 1.0039e+07 0.00316158 1.45475e+07 50.28 0.00752211 0.993686 0 50.0024 GTEX-1128S-2126-SM-5H12U 0 B1 2 pieces 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 882 963 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990693 156500 0.976552 0.992917 0.80184 21601 1 76 0.00217371 141 0 6.46054e+07 0.0231733 279576 6.50663e+07 7.94606e+06 21622 3.2156e+07 0 0.174711 0.992917 0.796161 6.46054e+07 0.00336434 1.41446e+07 6.00632e+06 1.41859e+07 156 1.41987e+07 1.05022e+07 0.0027677 1.42694e+07 50.1241 0.00429679 0.995141 0 50.073 GTEX-1128S-2326-SM-5GZZY 0 B1 6 pieces, squamous epithelium is 40-50 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 886 959 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989332 218936 0.96828 0.991241 0.762783 24311 1 76 0.00241892 283 0 9.08084e+07 0.0315409 639467 9.16108e+07 1.01585e+07 24351 4.52194e+07 0 0.205497 0.991241 0.756102 9.08084e+07 0.00338775 1.9899e+07 1.01034e+07 2.00466e+07 257 2.00057e+07 1.29663e+07 0.0029024 2.01034e+07 50.1218 0.00698026 0.99315 0 50.1847 GTEX-1128S-2426-SM-5H11B 0 B1 2 pieces ~10% adherent/interstitial fat, rep delineated 7.6 Muscle Muscle - Skeletal 0011907 889 956 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.9922 232445 0.984236 0.994007 0.871381 20012 1 76 0.00225736 275 0 9.7346e+07 0.0154572 1.4395e+06 9.7933e+07 1.21061e+07 20022 4.85008e+07 0 0.112856 0.994007 0.866158 9.7346e+07 0.00312438 2.15634e+07 1.64298e+07 2.136e+07 293 2.13002e+07 1.77236e+07 0.00269008 2.17844e+07 50.5619 0.0146988 0.995814 0 49.763 GTEX-1128S-2526-SM-5H11N 0 B1 3 pieces, generally clean specimens 6.1 Blood Vessel Artery - Tibial 0007610 889 956 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988223 155651 0.975075 0.991076 0.83413 21007 1 76 0.0021005 145 0 6.23444e+07 0.0246285 355285 6.29057e+07 8.04726e+06 21019 3.0997e+07 0 0.140945 0.991076 0.826686 6.23444e+07 0.00364071 1.34221e+07 6.27528e+06 1.35521e+07 153 1.35357e+07 1.14083e+07 0.00286839 1.36121e+07 50.1407 0.0056479 0.993929 0 50.241 GTEX-1128S-2626-SM-5H11Z 1 B1 2 pieces, 90% adenohypophysis/ 10% neurohypophysis 6.7 Pituitary Pituitary 0000007 1030 815 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990045 279511 0.965438 0.992478 0.738286 25305 1 76 0.0022669 141 0 7.3971e+07 0.0342672 411522 7.45316e+07 9.88063e+06 25340 3.67948e+07 0 0.227152 0.992478 0.732733 7.3971e+07 0.00340699 1.61832e+07 7.63612e+06 1.63015e+07 163 1.63544e+07 1.10415e+07 0.00283555 1.63044e+07 49.9234 0.00552144 0.994912 0 50.182 GTEX-1128S-2726-SM-5H12C 1 B1 2 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 1034 811 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990483 400475 0.962688 0.993186 0.832066 23634 1 76 0.00244631 268 0 8.81721e+07 0.0370022 4.07208e+06 8.8777e+07 1.13043e+07 23650 4.38769e+07 0 0.130622 0.993186 0.826396 8.81721e+07 0.00360614 1.92888e+07 1.99971e+07 1.94557e+07 308 1.93668e+07 9.66262e+06 0.00302465 1.95975e+07 50.2961 0.0458686 0.995889 0 50.2155 GTEX-1128S-2826-SM-5N9DI 1 B1 2 pieces, Purkinje cells, no evidence of hypoxic damage 6.3 Brain Brain - Cerebellum 0002037 1036 809 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991069 435871 0.93529 0.992053 0.711747 22983 1 76 0.0031993 126 0 6.58241e+07 0.0644661 1.61115e+06 6.63514e+07 3.00071e+06 23004 3.27623e+07 0 0.223543 0.992053 0.706091 6.58241e+07 0.00366805 1.39945e+07 2.06605e+07 1.4165e+07 148 1.41006e+07 6.42584e+06 0.00343344 1.41222e+07 50.0382 0.0242821 0.993037 0 50.3028 GTEX-113IC-0001-SM-58Q97 B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-113IC-0001-SM-5DWSI B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-113IC-0001-SM-DLIPU B1 Blood Whole Blood 0013756 -351 BP-38890 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/10/2013 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-113IC-0006-SM-5NQ9C B1 8.6 Blood Whole Blood 0013756 -351 BP-38883 RNA isolation_PAXgene Blood RNA (Manual) 05/10/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990953 494848 0.954345 0.992398 0.75565 20349 1 76 0.00238642 114 0 6.55132e+07 0.0451442 84043 6.60151e+07 4.87755e+06 20363 3.26131e+07 0 0.198695 0.992398 0.749905 6.55132e+07 0.00341612 1.43244e+07 3.86714e+07 1.44999e+07 125 1.44964e+07 1.27611e+07 0.00290052 1.44299e+07 49.8851 0.00127309 0.993843 0 50.3045 GTEX-113IC-0008-SM-5QGRF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 94 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994611 457452 0.97444 0.995567 0.860358 19742 1 76 0.00178661 147 0 6.80517e+07 0.0252717 320767 6.83547e+07 4.47708e+06 19755 3.39279e+07 0 0.114082 0.995567 0.856544 6.80517e+07 0.00251265 1.51523e+07 1.16762e+07 1.52713e+07 146 1.52374e+07 1.73689e+07 0.00214928 1.52637e+07 50.0431 0.00469269 0.996524 0 50.1956 GTEX-113IC-0126-SM-5HL6T 0 B1 6 pieces, squamous epithelium is ~60 microns thick 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 94 1080 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990044 236888 0.968855 0.992448 0.773015 23717 1 76 0.00254662 129 0 5.76246e+07 0.030891 359227 5.80631e+07 6.47396e+06 23740 2.8668e+07 0 0.195841 0.992448 0.767177 5.76246e+07 0.00362957 1.25375e+07 5.57599e+06 1.26443e+07 131 1.26349e+07 9.02601e+06 0.00308678 1.26785e+07 50.0861 0.00618684 0.994852 0 50.2121 GTEX-113IC-0226-SM-5HL5C 0 B1 2 pieces, 40-50% adipose tissue (delineated), rest is fibroconnective tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 96 1078 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991745 185118 0.974144 0.993739 0.823367 23027 1 76 0.00238364 146 0 6.59746e+07 0.0255442 371015 6.63903e+07 7.61601e+06 23047 3.2835e+07 0 0.150776 0.993739 0.818212 6.59746e+07 0.00339304 1.44631e+07 5.78993e+06 1.45592e+07 156 1.45382e+07 1.1828e+07 0.00288733 1.46139e+07 50.1298 0.0055884 0.995732 0 50.1656 GTEX-113IC-0426-SM-5HL5O 0 B1 2 pieces, clean specimens, prominent Monckeberg sclerosis, rep. foci delineated 8.3 Blood Vessel Artery - Tibial 0007610 101 1073 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98972 310543 0.974672 0.992483 0.862868 21977 1 76 0.00222265 145 0 6.63308e+07 0.0249157 211364 6.68332e+07 7.92106e+06 21991 3.29737e+07 0 0.111804 0.992483 0.856382 6.63308e+07 0.0034414 1.41965e+07 6.14007e+06 1.43242e+07 162 1.42962e+07 1.30822e+07 0.00283033 1.44076e+07 50.194 0.00316256 0.995247 0 50.2238 GTEX-113IC-0526-SM-5HL76 0 B1 2 pieces, trace adherent nubbins of fat up to ~1mm, delineated. Good specimens 7.1 Nerve Nerve - Tibial 0001323 105 1069 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989608 162635 0.969996 0.991813 0.804698 22899 1 76 0.00241302 142 0 5.71371e+07 0.0296692 282054 5.76087e+07 6.37713e+06 22922 2.84223e+07 0 0.165297 0.991813 0.79811 5.71371e+07 0.00348323 1.24922e+07 5.1008e+06 1.25474e+07 135 1.25223e+07 9.93814e+06 0.00294694 1.26398e+07 50.2334 0.00489603 0.994019 0 50.1102 GTEX-113JC-0001-SM-58Q7M B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-113JC-0001-SM-5DWSH B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-113JC-0001-SM-6WBTD B1 Blood Whole Blood 0013756 587 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-113JC-0006-SM-5O997 B1 7.6 Blood Whole Blood 0013756 587 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.958802 385976 0.981747 0.962992 0.784795 18233 1 76 0.00239205 100 0 8.49315e+07 0.0170281 162448 8.81955e+07 1.32966e+07 18239 4.21538e+07 0 0.196953 0.962992 0.755751 8.49315e+07 0.00437273 1.98001e+07 1.30756e+08 2.00872e+07 135 2.01027e+07 2.19739e+07 0.00337808 2.01443e+07 50.0516 0.00184191 0.967181 0 50.3599 GTEX-113JC-0008-SM-5QGR6 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 681 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994723 263957 0.98125 0.995709 0.879991 19065 1 76 0.00155823 149 0 6.8855e+07 0.0184075 235629 6.91517e+07 4.34033e+06 19073 3.43271e+07 0 0.101259 0.995709 0.876215 6.8855e+07 0.00228368 1.54765e+07 7.4448e+06 1.55365e+07 156 1.55072e+07 1.74847e+07 0.0019206 1.55779e+07 50.1136 0.00340742 0.996695 0 50.0969 GTEX-113JC-0126-SM-5EGJW 1 B1 2 pieces 5.8 Thyroid Thyroid 0002046 627 994 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988508 302257 0.969122 0.991161 0.682377 23696 1 76 0.00203551 140 0 7.72786e+07 0.0306201 214067 7.79678e+07 6.70913e+06 23745 3.84279e+07 0 0.286745 0.991161 0.676346 7.72786e+07 0.00309199 1.69691e+07 7.35968e+06 1.71513e+07 159 1.71929e+07 1.03424e+07 0.00256233 1.71223e+07 49.8971 0.00274558 0.993815 0 50.2671 GTEX-113JC-0726-SM-5GZZR 1 B1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 639 982 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.983439 215598 0.978059 0.98645 0.762104 22903 1 76 0.00215465 160 0 7.33797e+07 0.0216415 902286 7.43877e+07 9.36076e+06 22928 3.6459e+07 0 0.215955 0.98645 0.751777 7.33797e+07 0.00353816 1.62995e+07 9.14069e+06 1.63599e+07 180 1.63932e+07 1.06012e+07 0.00284429 1.64848e+07 50.1393 0.0121295 0.98946 0 50.0925 GTEX-113JC-0926-SM-5H114 1 B1 6 pieces, well trimmed muscle 5.8 Esophagus Esophagus - Muscularis 0004648 645 976 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.84395 177128 0.968973 0.846095 0.780423 21822 1 76 0.00218065 134 0 6.15511e+07 0.0308397 887823 7.27473e+07 8.9856e+06 21848 3.06008e+07 0 0.188549 0.846095 0.660312 6.15511e+07 0.00339263 1.33915e+07 6.06088e+06 1.34409e+07 159 1.34302e+07 7.70478e+06 0.0027851 1.35518e+07 50.2253 0.0122042 0.848241 0 50.0921 GTEX-113JC-1026-SM-5H117 1 B1 6 pieces, well trimmed muscle 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 646 975 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989172 212784 0.971295 0.991725 0.803621 21801 1 76 0.00207916 160 0 7.30466e+07 0.0285255 1.08129e+06 7.36561e+07 9.69251e+06 21818 3.6337e+07 0 0.167674 0.991725 0.796972 7.30466e+07 0.00336891 1.58575e+07 6.83144e+06 1.59102e+07 199 1.5897e+07 9.68939e+06 0.00272238 1.6051e+07 50.241 0.0146802 0.994278 0 50.083 GTEX-113JC-1926-SM-5N9GE 1 B1 6 pieces 5.7 Vagina Vagina 0000996 669 952 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98493 345857 0.968802 0.98592 0.732037 24980 1 76 0.00420057 212 0 9.81422e+07 0.0309716 624217 9.95437e+07 5.392e+06 25024 4.8673e+07 0 0.236765 0.98592 0.72173 9.81422e+07 0.00441809 2.17497e+07 1.06124e+07 2.18122e+07 221 2.1764e+07 1.37334e+07 0.00430922 2.19028e+07 50.1589 0.00627078 0.98691 0 50.0718 GTEX-113JC-2226-SM-5EGJG 1 B1 2 pieces; atrophic endometrium 6.3 Uterus Uterus 0000995 676 945 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988839 230745 0.968836 0.991312 0.714306 23419 1 76 0.00203604 147 0 7.23491e+07 0.0308752 146486 7.29832e+07 6.03042e+06 23459 3.59572e+07 0 0.25453 0.991312 0.7081 7.23491e+07 0.00313145 1.58083e+07 6.59958e+06 1.59675e+07 155 1.59672e+07 1.09864e+07 0.00258238 1.5983e+07 50.0248 0.00200712 0.993785 0 50.2505 GTEX-113JC-2326-SM-5EQ4E 1 B1 6 pieces; up to 30% fat within the dermis 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 681 940 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991228 255196 0.97345 0.993675 0.780447 23526 1 76 0.00203143 200 0 7.37073e+07 0.0262887 301962 7.41765e+07 9.00746e+06 23553 3.66765e+07 0 0.193003 0.993675 0.775511 7.37073e+07 0.00314681 1.60671e+07 8.44414e+06 1.62181e+07 169 1.62339e+07 1.28485e+07 0.00258775 1.62226e+07 49.9826 0.00407086 0.996122 0 50.2339 GTEX-113JC-2726-SM-5EGIS 0 B1 2 pieces 7.7 Muscle Muscle - Skeletal 0011907 686 935 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983976 223292 0.983145 0.989632 0.870333 19426 1 76 0.00209209 122 0 6.17054e+07 0.0166355 572061 6.23518e+07 1.00418e+07 19433 3.06145e+07 0 0.112812 0.989632 0.861309 6.17054e+07 0.00536547 1.36283e+07 6.89940e+06 1.35129e+07 139 1.36218e+07 1.28313e+07 0.00371943 1.38379e+07 50.3934 0.00917472 0.995288 0 49.7874 GTEX-113JC-2826-SM-5EGIT 2 B1 2 pieces; anterior and posterior represented; some boney fragments with marrow 6.1 Pituitary Pituitary 0000007 818 803 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986095 248252 0.963208 0.990175 0.737607 23772 1 76 0.00239295 114 0 6.04778e+07 0.0365457 266693 6.10779e+07 9.43048e+06 23799 3.00399e+07 0 0.225601 0.990175 0.73036 6.04778e+07 0.0052926 1.29208e+07 9.24137e+06 1.30163e+07 127 1.30902e+07 9.35082e+06 0.0038368 1.30772e+07 49.9752 0.00436644 0.994254 0 50.1841 GTEX-117XS-0001-SM-58Q7J B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117XS-0001-SM-5DWSE B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-117XS-0001-SM-6WBTA B1 Blood Whole Blood 0013756 802 BP-38920 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/13/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117XS-0005-SM-5PNU6 B1 6.4 Blood Whole Blood 0013756 802 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.960674 371056 0.978298 0.962396 0.807746 16519 1 76 0.00234312 95 0 6.4754e+07 0.0200178 230282 6.72841e+07 7.02284e+06 16521 3.21941e+07 0 0.170553 0.962396 0.777371 6.4754e+07 0.00406583 1.52079e+07 1.10752e+08 1.53347e+07 113 1.53068e+07 1.68621e+07 0.00320293 1.5368e+07 50.0999 0.00342253 0.964118 0 50.2075 GTEX-117XS-0008-SM-5Q5DQ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 917 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991389 449957 0.976267 0.994092 0.856398 21212 1 76 0.00187326 217 0 9.56742e+07 0.0233618 348920 9.62429e+07 1.54032e+07 21230 4.7623e+07 0 0.119868 0.994092 0.851338 9.56742e+07 0.0031246 2.14262e+07 1.62208e+07 2.15228e+07 246 2.15762e+07 2.51945e+07 0.00249723 2.1632e+07 50.0645 0.00362541 0.996794 0 50.1124 GTEX-117XS-0011-R10a-SM-AHZ7G B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 834 ChIP-Seq GTEX-117XS-0426-SM-5GZZN 1 B1 6 pieces, mural atherosclerotic changes 6.6 Blood Vessel Artery - Aorta 0001496 857 597 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989492 247390 0.974589 0.992163 0.803101 21537 1 76 0.00219702 167 0 7.85478e+07 0.0249858 222363 7.91683e+07 9.98143e+06 21553 3.90414e+07 0 0.171488 0.992163 0.796807 7.85478e+07 0.00349298 1.68565e+07 7.17083e+06 1.70299e+07 181 1.70443e+07 1.41577e+07 0.00284326 1.70479e+07 50.0052 0.00280874 0.994833 0 50.2559 GTEX-117XS-0526-SM-5987Q 2 B1 2 pieces, nodular hyperplasia 7 Thyroid Thyroid 0002046 859 595 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985041 215394 0.969179 0.989467 0.737936 23644 1 76 0.0028242 116 0 5.94656e+07 0.0305055 219447 6.00986e+07 1.28068e+07 23676 2.95212e+07 0 0.231243 0.989467 0.730163 5.94656e+07 0.00616407 1.30117e+07 6.6456e+06 1.30862e+07 120 1.31763e+07 9.25921e+06 0.00448667 1.317e+07 49.9881 0.00365145 0.993892 0 50.1427 GTEX-117XS-0726-SM-5H131 1 B1 2 pieces, myocardial infarction, diffuse interstitial fibrosis 6.9 Heart Heart - Atrial Appendage 0006631 862 592 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990133 197718 0.976823 0.992974 0.821585 21590 1 76 0.00235159 155 0 6.92814e+07 0.0229838 2.57374e+06 6.97717e+07 8.9561e+06 21608 3.44696e+07 0 0.155239 0.992974 0.815812 6.92814e+07 0.00369097 1.52494e+07 1.11875e+07 1.50361e+07 195 1.50512e+07 8.14924e+06 0.00301937 1.5409e+07 50.5872 0.036888 0.995815 0 49.6478 GTEX-117XS-1926-SM-5GICO 1 B1 2 pieces, gynecomastoid change 6 Breast Breast - Mammary Tissue 0008367 894 560 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796,LCSET-5161 03/17/2014 TruSeq.v1 RNASEQ 0.977445 336013 0.974068 0.983765 0.759742 25123 1 76 0.00463264 278 0 1.088e+08 0.0256133 753484 1.10595e+08 1.04655e+07 25175 5.38553e+07 0 0.214325 0.983765 0.747408 1.088e+08 0.00604888 2.37927e+07 1.29269e+07 2.40705e+07 274 2.42468e+07 1.47972e+07 0.00533622 2.42636e+07 50.0173 0.006813 0.990086 0 50.2901 GTEX-117XS-2026-SM-5GID1 1 B1 2 pieces, spermatogenesis present 6.8 Testis Testis 0000473 896 558 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988355 237864 0.931534 0.990823 0.732771 32475 1 76 0.00281087 143 0 7.03354e+07 0.0681131 527882 7.09868e+07 9.12350e+06 32525 3.4996e+07 0 0.198763 0.990823 0.726047 7.03354e+07 0.00335334 1.46417e+07 9.5707e+06 1.46865e+07 139 1.47607e+07 1.18683e+07 0.00308143 1.47252e+07 49.9398 0.00743634 0.993291 0 50.0764 GTEX-117XS-2226-SM-5GIE1 2 B1 6 pieces, muscularis present (target); few pieces include 10 to 40% fat up to 1.175 mm; two pieces with small fragments of autolyzed mucosa 6.2 Colon Colon - Sigmoid 0001159 907 547 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987049 261681 0.968299 0.990643 0.811839 22234 1 76 0.00267008 131 0 6.28684e+07 0.0314644 690090 6.34622e+07 8.32302e+06 22247 3.12306e+07 0 0.15646 0.990643 0.804243 6.28684e+07 0.00378189 1.34132e+07 7.16708e+06 1.34595e+07 148 1.34738e+07 1.01192e+07 0.00322397 1.36128e+07 50.2565 0.010874 0.994237 0 50.0861 GTEX-117XS-2526-SM-5H11G 2 B1 2 pieces, includes up to 10% attached and internal adipose tissue 8.3 Muscle Muscle - Skeletal 0011907 914 540 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.993113 211694 0.986479 0.99503 0.888865 19167 1 76 0.00192204 198 0 8.01305e+07 0.0133125 1.0168e+06 8.05307e+07 1.01815e+07 19175 3.99259e+07 0 0.0976137 0.99503 0.884448 8.01305e+07 0.00277694 1.74394e+07 9.80234e+06 1.74653e+07 227 1.7399e+07 1.72607e+07 0.00234867 1.76593e+07 50.3713 0.0126262 0.996948 0 50.0372 GTEX-117XS-2526-SM-CYKR4 2 B1 2 pieces, includes up to 10% attached and internal adipose tissue 8.3 Muscle Muscle - Skeletal 0011907 914 540 BP-43693 RNA Extraction from Paxgene-derived Lysate Plate Based 09/17/2013 RIP-Seq GTEX-117XS-2726-SM-5N9BL 1 B1 6 pieces, some pieces include up to 10% attached and internal adipose tissue 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 916 538 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991879 196421 0.971106 0.992687 0.792756 23286 1 76 0.00290525 248 0 8.68214e+07 0.0287073 687002 8.7461e+07 4.18073e+06 23313 4.3237e+07 0 0.17835 0.992687 0.786958 8.68214e+07 0.00352805 1.89958e+07 9.94013e+06 1.90785e+07 220 1.89569e+07 1.37056e+07 0.0032164 1.919e+07 50.3056 0.00785495 0.993495 0 50.1085 GTEX-117XS-2926-SM-5N9BX 1 B1 5 pieces, adenohypophysis (larger pieces) and neurohypophysis (smallest piece, marked) 7.5 Pituitary Pituitary 0000007 1016 438 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992034 277273 0.96823 0.993337 0.799339 25704 1 76 0.00276585 204 0 9.41348e+07 0.0314696 231111 9.47663e+07 4.83845e+06 25744 4.68791e+07 0 0.168891 0.993337 0.794013 9.41348e+07 0.00334942 1.73352e+07 1.14758e+07 1.74236e+07 247 1.74284e+07 1.87131e+07 0.00305725 1.74378e+07 50.0135 0.00243875 0.99464 0 50.1271 GTEX-117XS-3026-SM-5N9CA 1 B1 3 pieces 6.4 Brain Brain - Cortex 0001870 1017 437 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992014 346781 0.967309 0.993303 0.830201 24501 1 76 0.00298026 270 0 1.04567e+08 0.0323446 3.67525e+06 1.05272e+08 5.49317e+06 24525 5.2091e+07 0 0.137108 0.993303 0.824641 1.04567e+08 0.00353795 2.27815e+07 2.20157e+07 2.30573e+07 320 2.2951e+07 1.26402e+07 0.00325874 2.30079e+07 50.0619 0.0349119 0.994591 0 50.3008 GTEX-117XS-3026-SM-CYKOR 1 B1 3 pieces 6.4 Brain Brain - Cortex 0001870 1017 437 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 RIP-Seq GTEX-117XS-3126-SM-5GIDP 1 B1 2 pieces, Purkinje cells present 7.2 Brain Brain - Cerebellum 0002037 1018 436 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988669 301081 0.951371 0.990955 0.734977 23003 1 76 0.00298862 112 0 6.1555e+07 0.0482285 852630 6.21168e+07 7.40227e+06 23024 3.06101e+07 0 0.216395 0.990955 0.728329 6.1555e+07 0.00369029 1.33679e+07 9.82856e+06 1.34417e+07 138 1.34903e+07 7.72495e+06 0.00333864 1.34505e+07 49.9261 0.0137262 0.993241 0 50.1377 GTEX-117YW-0003-SM-58Q99 B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117YW-0003-SM-5DWRD B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-117YW-0003-SM-6WBSY B1 Blood Whole Blood 0013756 771 BP-38948 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117YW-0005-SM-5NQ8Z B1 8.5 Blood Whole Blood 0013756 771 BP-38943 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.976598 363381 0.978813 0.978503 0.780731 18582 1 76 0.00247853 109 0 7.83408e+07 0.0199449 202166 8.00619e+07 7.28288e+06 18593 3.89748e+07 0 0.198082 0.978503 0.763948 7.83408e+07 0.0037221 1.79832e+07 1.05671e+08 1.8467e+07 133 1.84596e+07 1.87715e+07 0.0030991 1.81456e+07 49.5711 0.00252512 0.980408 0 50.6636 GTEX-117YW-0008-SM-5QGRD B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 980 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994335 432097 0.974778 0.995489 0.862078 19362 1 76 0.00157915 146 0 6.71738e+07 0.0248581 272333 6.74782e+07 4.70688e+06 19371 3.34852e+07 0 0.112699 0.995489 0.85819 6.71738e+07 0.00231957 1.50552e+07 1.1275e+07 1.51127e+07 144 1.51128e+07 1.75693e+07 0.00194893 1.51417e+07 50.0476 0.00403586 0.996643 0 50.0954 GTEX-117YW-0126-SM-5EGGN 2 B1 2 pieces, some fibrosis and nodularity, few collections of lymphocytes 6.8 Thyroid Thyroid 0002046 813 712 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982585 198712 0.963963 0.987043 0.638625 24353 1 76 0.00261941 103 0 6.19445e+07 0.0357358 169925 6.27577e+07 9.15124e+06 24397 3.07437e+07 0 0.325338 0.987043 0.63035 6.19445e+07 0.00568586 1.35579e+07 6.70738e+06 1.36347e+07 115 1.37273e+07 7.67021e+06 0.00414571 1.37274e+07 50.0001 0.00270764 0.991501 0 50.1412 GTEX-117YW-0226-SM-5N9CM 1 B1 6 pieces, mild atherosclerosis, some attached adventitia 6.5 Blood Vessel Artery - Aorta 0001496 815 710 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988966 208302 0.969172 0.989807 0.77849 22587 1 76 0.00297243 164 0 8.00206e+07 0.0304643 158789 8.08446e+07 3.76641e+06 22609 3.98051e+07 0 0.190683 0.989807 0.770554 8.00206e+07 0.00360991 1.71081e+07 8.77538e+06 1.71924e+07 179 1.71182e+07 1.35473e+07 0.0032909 1.72539e+07 50.1974 0.00196413 0.990647 0 50.1228 GTEX-117YW-0326-SM-5N9CY 0 B1 2 pieces, small component of fat (<10% both pieces), increased interstitial and patchy fibrosis with evidence of old myocardial infarction, myocyte hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 816 709 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99057 150503 0.984444 0.991893 0.832867 20097 1 76 0.00273222 264 0 7.32563e+07 0.0154486 4.59143e+06 7.3855e+07 3.36556e+06 20106 3.64785e+07 0 0.151577 0.991893 0.826115 7.32563e+07 0.0033926 1.62772e+07 2.69493e+07 1.63719e+07 276 1.62745e+07 5.20362e+06 0.00306197 1.64648e+07 50.2906 0.0621681 0.993217 0 50.1451 GTEX-117YW-0426-SM-5GZZZ 1 B1 2 pieces, one is ~25% fat, second includes 2 zones of fibrosis/old infarct 5.8 Heart Heart - Atrial Appendage 0006631 817 708 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986906 141936 0.98729 0.990119 0.837394 19840 1 76 0.00207371 366 0 8.82702e+07 0.0126497 7.45302e+06 8.91511e+07 1.12206e+07 19846 4.39202e+07 0 0.149896 0.990119 0.829121 8.82702e+07 0.00347058 1.98206e+07 4.47756e+07 1.8947e+07 387 1.89073e+07 3.95834e+06 0.00276988 2.01319e+07 51.5684 0.0835999 0.993333 0 48.8733 GTEX-117YW-0526-SM-5H11C 1 B1 2 pieces, severe congestion and edema, numerous hemosiderin-laden macrophages 6.2 Lung Lung 0008952 825 700 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986327 293181 0.970213 0.989652 0.711333 24177 1 76 0.00256866 146 0 7.5802e+07 0.0292101 374126 7.65946e+07 8.69729e+06 24214 3.76241e+07 0 0.25888 0.989652 0.703972 7.5802e+07 0.00402577 1.66822e+07 7.62691e+06 1.67975e+07 167 1.68457e+07 1.00469e+07 0.00329477 1.68838e+07 50.0564 0.0048845 0.992977 0 50.1722 GTEX-117YW-0826-SM-5H11O 0 B1 2 pieces, all fat 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 838 687 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987482 263950 0.973755 0.990239 0.754071 23699 1 76 0.00228054 144 0 6.70282e+07 0.0259164 421414 6.76889e+07 8.32683e+06 23726 3.33156e+07 0 0.219684 0.990239 0.746711 6.70282e+07 0.00372774 1.47916e+07 7.82429e+06 1.48579e+07 158 1.48899e+07 9.85232e+06 0.00300213 1.49413e+07 50.0862 0.00622574 0.992997 0 50.1118 GTEX-117YW-1426-SM-5EGGO 1 B1 2 pieces, epithelium largely sloughed, glandular hyperplasia, chronic prostatitis, some basal cell hyperplasia 5.9 Prostate Prostate 0002367 884 641 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981875 175016 0.970091 0.987373 0.737855 23886 1 76 0.00250385 118 0 5.4352e+07 0.0296745 1.18888e+06 5.50471e+07 7.98707e+06 23919 2.69367e+07 0 0.232236 0.987373 0.728538 5.4352e+07 0.00621777 1.21246e+07 6.19394e+06 1.20901e+07 133 1.21574e+07 6.31569e+06 0.00435047 1.23391e+07 50.3708 0.0215976 0.992871 0 49.9288 GTEX-117YW-1526-SM-5EGGP 1 B1 2 pieces, active spermatogenesis, arteriosclerosis 6.6 Testis Testis 0000473 886 639 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984637 184377 0.927292 0.988719 0.725215 31665 1 76 0.00237683 121 0 5.98333e+07 0.0723521 509405 6.0516e+07 8.91679e+06 31706 2.97244e+07 0 0.202077 0.988719 0.717034 5.98333e+07 0.00538229 1.22533e+07 8.56875e+06 1.22624e+07 118 1.23364e+07 9.98054e+06 0.00387336 1.2395e+07 50.1185 0.00841769 0.9928 0 50.0186 GTEX-117YW-1826-SM-5PNY5 2 B1 6 pieces, mucosa (autolysis 1-2) and muscularis 6.2 Colon Colon - Transverse 0001157 895 630 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989371 197406 0.978724 0.990077 0.755756 23728 1 76 0.00377523 285 0 9.9077e+07 0.0185449 2.06041e+06 1.0007e+08 2.79753e+06 23767 4.92281e+07 0 0.222967 0.990077 0.748257 9.9077e+07 0.0041378 2.2498e+07 1.40082e+07 2.2619e+07 271 2.25695e+07 1.47053e+07 0.00395638 2.26121e+07 50.0472 0.0205897 0.990783 0 50.1341 GTEX-117YW-1926-SM-5H121 2 B1 6 pieces, epithelium sloughing, muscularis focally present 6.6 Esophagus Esophagus - Mucosa 0006920 902 623 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987357 237994 0.976764 0.990014 0.819778 21436 1 76 0.00221683 156 0 7.47268e+07 0.0230115 867659 7.54806e+07 9.19838e+06 21449 3.71594e+07 0 0.156985 0.990014 0.811591 7.47268e+07 0.0037615 1.68804e+07 1.04212e+07 1.69419e+07 202 1.69576e+07 1.06439e+07 0.00298709 1.70641e+07 50.1566 0.0114951 0.99267 0 50.0909 GTEX-117YW-2026-SM-5N9BH 2 B1 6 pieces, trimmed, but with abundant detached squamous (and few glandular) cells 5.9 Esophagus Esophagus - Muscularis 0004648 904 621 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991284 161570 0.974477 0.992226 0.825944 22479 1 76 0.00279623 267 0 8.48524e+07 0.0253461 3.07341e+06 8.55172e+07 4.13927e+06 22497 4.22475e+07 0 0.148533 0.992226 0.819523 8.48524e+07 0.00343472 1.8591e+07 1.07216e+07 1.87159e+07 314 1.85569e+07 9.34778e+06 0.00311517 1.88309e+07 50.3665 0.0359391 0.993167 0 50.1674 GTEX-117YW-2226-SM-5N9DB 2 B1 6 pieces, mucosa and muscularis 7.3 Stomach Stomach 0000945 910 615 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.980499 173923 0.98366 0.981914 0.867743 21736 1 76 0.00268497 329 0 8.87021e+07 0.0158023 420615 9.03359e+07 4.75854e+06 21753 4.4161e+07 0 0.115918 0.981914 0.852049 8.87021e+07 0.00325672 2.04619e+07 1.10052e+08 2.08129e+07 250 2.08369e+07 2.65918e+07 0.00297044 2.05622e+07 49.6683 0.00465612 0.983329 0 50.4252 GTEX-117YW-2426-SM-5Q5AE 1 B1 2 pieces (fragmented), one includes ~20% fat (mostly internal) 6.1 Muscle Muscle - Skeletal 0011907 978 547 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990337 192995 0.985243 0.993022 0.884722 19070 1 76 0.00153747 199 0 8.52505e+07 0.0145279 1.03858e+06 8.58496e+07 5.94943e+06 19078 4.24231e+07 0 0.100521 0.993022 0.878548 8.52505e+07 0.00258722 1.83198e+07 9.68145e+06 1.83271e+07 229 1.82925e+07 1.83279e+07 0.00206093 1.85567e+07 50.3584 0.0120977 0.995706 0 50.01 GTEX-117YW-2626-SM-5GZZH 1 B1 6 pieces, predominantly well trimmed, one piece includes attached fat ~10%, squamous epithelium is ~30 microns thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 982 543 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.982481 255623 0.975499 0.985379 0.808283 23785 1 76 0.00211647 166 0 7.20431e+07 0.0242787 337575 7.31121e+07 8.80992e+06 23807 3.58196e+07 0 0.167216 0.985379 0.796465 7.20431e+07 0.00357027 1.58526e+07 7.91328e+06 1.59661e+07 173 1.59907e+07 1.2665e+07 0.00284123 1.60367e+07 50.0718 0.00461723 0.988276 0 50.1782 GTEX-117YW-2726-SM-5GZZT 1 B1 2 pieces, medial calcific sclerosis 7.7 Blood Vessel Artery - Tibial 0007610 984 541 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989656 216808 0.977663 0.992479 0.843979 22809 1 76 0.00200431 174 0 7.16776e+07 0.0220166 341268 7.22207e+07 8.8667e+06 22827 3.56388e+07 0 0.133684 0.992479 0.837632 7.16776e+07 0.0035739 1.54313e+07 6.62954e+06 1.55556e+07 172 1.55741e+07 1.42922e+07 0.00278687 1.56106e+07 50.0586 0.00472535 0.995302 0 50.2005 GTEX-117YW-2826-SM-5H116 1 B1 2 pieces, includes adenohypophysis, neurohypopohysis, and pars intermedia 6 Pituitary Pituitary 0000007 1042 483 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989008 402389 0.950877 0.991937 0.752975 24854 1 76 0.00220663 138 0 6.38945e+07 0.0489088 382396 6.44139e+07 7.58246e+06 24884 3.17557e+07 0 0.197902 0.991937 0.746903 6.38945e+07 0.00372099 1.34902e+07 1.18751e+07 1.35931e+07 160 1.36141e+07 8.11769e+06 0.00296157 1.36494e+07 50.0647 0.00593655 0.994865 0 50.19 GTEX-117YW-2926-SM-5GIEQ 1 B1 2 pieces, adherent meninges 5.9 Brain Brain - Cortex 0001870 1045 480 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 EXCLUDE 0.988645 204066 0.978458 0.991603 0.838234 21740 1 76 0.00265403 194 0 6.9665e+07 0.0213812 5.1325e+06 7.02549e+07 8.52307e+06 21752 3.46471e+07 0 0.140223 0.991603 0.831195 6.9665e+07 0.0037161 1.54015e+07 1.81806e+07 1.54091e+07 250 1.51067e+07 5.48681e+06 0.00318348 1.5892e+07 51.2666 0.0730553 0.99456 0 50.0124 GTEX-117YX-0001-SM-5DU4O B1 Blood Whole Blood 0013756 -104 BP-38957 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-117YX-0001-SM-7DRQ6 B1 Blood Whole Blood 0013756 -104 BP-38957 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-117YX-0126-SM-5EGH5 1 B1 2 pieces; well dissected, no fat, focal periadrenal hemorrhage (annotated) 7.9 Adrenal Gland Adrenal Gland 0002369 76 730 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985698 191577 0.978701 0.990939 0.837769 21027 1 76 0.00250238 111 0 5.33125e+07 0.0209592 1.21555e+06 5.38e+07 8.26771e+06 21041 2.64548e+07 0 0.140932 0.990939 0.830178 5.33125e+07 0.00580027 1.18617e+07 6.81742e+06 1.17614e+07 128 1.18216e+07 8.65916e+06 0.00414261 1.20538e+07 50.4863 0.0225939 0.996181 0 49.7877 GTEX-117YX-0226-SM-5EGH6 1 B1 2 pieces; well dissected, no fat 7 Pancreas Pancreas 0001150 80 726 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984932 163366 0.981925 0.989797 0.865036 21270 1 76 0.00245625 100 0 6.76799e+07 0.017822 282624 6.83776e+07 1.05941e+07 21282 3.36047e+07 0 0.116889 0.989797 0.85621 6.76799e+07 0.00568376 1.55424e+07 1.59061e+07 1.55686e+07 118 1.56067e+07 1.90855e+07 0.00406207 1.58312e+07 50.357 0.00413328 0.994662 0 50.0422 GTEX-117YX-0326-SM-5GICL 1 B1 6 pieces, 5 with lymphoid tissue [labeled] 8 Small Intestine Small Intestine - Terminal Ileum 0001211 84 722 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991206 176555 0.977144 0.993604 0.839805 22137 1 76 0.00263017 136 0 5.99792e+07 0.0225539 354833 6.03652e+07 7.34087e+06 22148 2.98518e+07 0 0.137339 0.993604 0.834434 5.99792e+07 0.0034064 1.31108e+07 5.6639e+06 1.31884e+07 142 1.31861e+07 1.07777e+07 0.00301735 1.32481e+07 50.1173 0.0058781 0.996003 0 50.1475 GTEX-117YX-0526-SM-5EGJH 1 B1 5 pieces: all have muscularis, 2 have mucosa [not target] 7.3 Colon Colon - Sigmoid 0001159 88 718 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991521 248290 0.976664 0.993912 0.833986 22021 1 76 0.00184058 147 0 6.68199e+07 0.0230281 395412 6.72292e+07 5.57605e+06 22034 3.32512e+07 0 0.142678 0.993912 0.828909 6.68199e+07 0.00288098 1.45204e+07 5.97036e+06 1.46645e+07 160 1.46384e+07 1.22169e+07 0.00235952 1.46974e+07 50.1006 0.00588155 0.996304 0 50.2468 GTEX-117YX-0626-SM-5EGJI 1 B1 6 pieces; thick (up to 0.5 mm) fibrous layers 50% of area 7.9 Heart Heart - Atrial Appendage 0006631 90 716 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988401 278995 0.983418 0.992099 0.852696 22021 1 76 0.0020182 269 0 9.16541e+07 0.0162868 1.9582e+06 9.2384e+07 8.81048e+06 22036 4.55666e+07 0 0.130722 0.992099 0.845959 9.16541e+07 0.00297344 1.96137e+07 2.04043e+07 1.96718e+07 268 1.95844e+07 1.55857e+07 0.00249404 1.99896e+07 50.512 0.0211963 0.995797 0 50.0739 GTEX-117YX-0726-SM-5GIET 0 B1 2 pieces; 1 fatty, 1 fibrofatty 8.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 91 715 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991758 222566 0.981685 0.993704 0.864285 21887 1 76 0.00258349 168 0 7.27654e+07 0.0179832 283883 7.32264e+07 8.71398e+06 21900 3.62373e+07 0 0.1174 0.993704 0.858844 7.27654e+07 0.00311052 1.62419e+07 6.68688e+06 1.63029e+07 179 1.6303e+07 1.51605e+07 0.00284649 1.63812e+07 50.1196 0.00387678 0.99565 0 50.0938 GTEX-117YX-0826-SM-5H11J 1 B1 6 pieces, 2 without mucosa 8.5 Colon Colon - Transverse 0001157 92 714 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990207 263149 0.97836 0.992988 0.851581 22415 1 76 0.00204504 212 0 8.21303e+07 0.0212741 413430 8.27102e+07 1.16301e+07 22430 4.08666e+07 0 0.126779 0.992988 0.84561 8.21303e+07 0.00305835 1.79308e+07 7.03082e+06 1.80762e+07 216 1.80944e+07 1.64661e+07 0.00255028 1.8129e+07 50.0478 0.00499854 0.99577 0 50.2018 GTEX-117YX-1026-SM-5H11V 1 B1 6 pieces, all full thickness 7 Stomach Stomach 0000945 101 705 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988857 198195 0.979179 0.991235 0.840684 22072 1 76 0.00229195 257 0 7.33786e+07 0.0204039 1.03023e+06 7.40274e+07 9.39151e+06 22092 3.65152e+07 0 0.138495 0.991235 0.833315 7.33786e+07 0.00336041 1.66182e+07 3.69819e+07 1.67689e+07 204 1.67787e+07 1.4295e+07 0.0028249 1.67753e+07 49.9949 0.0139169 0.993612 0 50.2257 GTEX-117YX-1126-SM-5H128 1 B1 2 pieces; enlarged nuclei 8.1 Heart Heart - Left Ventricle 0006566 102 704 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.992719 166997 0.987854 0.99445 0.8684 19430 1 76 0.00238139 266 0 8.28208e+07 0.0118889 1.71318e+06 8.3283e+07 1.01682e+07 19435 4.12745e+07 0 0.119454 0.99445 0.86358 8.28208e+07 0.00327135 1.83487e+07 2.04651e+07 1.79982e+07 263 1.78867e+07 1.30661e+07 0.0028256 1.86073e+07 50.9873 0.0205706 0.996181 0 49.5178 GTEX-117YX-1226-SM-5H11S 1 B1 2 pieces 6.6 Thyroid Thyroid 0002046 105 701 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99002 230852 0.967991 0.992465 0.786047 23063 1 76 0.00211662 152 0 7.00356e+07 0.0317536 508428 7.05674e+07 8.79471e+06 23089 3.48512e+07 0 0.181944 0.992465 0.780124 7.00356e+07 0.00324926 1.53392e+07 7.52272e+06 1.54122e+07 168 1.54105e+07 1.07956e+07 0.00268154 1.55059e+07 50.1543 0.00720486 0.994909 0 50.1187 GTEX-117YX-1326-SM-5H125 1 B1 2 pieces; patchy pneumonia 8.2 Lung Lung 0008952 106 700 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991825 277258 0.975701 0.993712 0.82753 23407 1 76 0.00228102 206 0 7.95518e+07 0.023848 285965 8.00552e+07 9.7867e+06 23436 3.9611e+07 0 0.148171 0.993712 0.822327 7.95518e+07 0.00320442 1.76982e+07 6.74763e+06 1.78351e+07 205 1.78763e+07 1.4788e+07 0.00274184 1.78015e+07 49.8952 0.0035721 0.995599 0 50.1927 GTEX-117YX-1426-SM-5H12H 1 B1 2 pieces; fibrofatty tissue, no ducts 7.7 Breast Breast - Mammary Tissue 0008367 107 699 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991119 197338 0.981001 0.993772 0.84789 21405 1 76 0.00215066 146 0 6.2494e+07 0.0187269 480539 6.28856e+07 7.56091e+06 21422 3.10983e+07 0 0.13311 0.993772 0.84261 6.2494e+07 0.00345225 1.38968e+07 6.21198e+06 1.39576e+07 156 1.39618e+07 1.13485e+07 0.00279972 1.40513e+07 50.1598 0.00764147 0.996425 0 50.1091 GTEX-117YX-1526-SM-5H12T 1 B1 2 pieces; glandular hyperplasia 6.1 Prostate Prostate 0002367 110 696 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990936 253577 0.966081 0.993004 0.764077 24365 1 76 0.00229568 164 0 7.95326e+07 0.0336334 642079 8.00929e+07 9.38154e+06 24395 3.9598e+07 0 0.202004 0.993004 0.758731 7.95326e+07 0.00334823 1.74521e+07 1.1378e+07 1.7603e+07 195 1.75465e+07 1.09297e+07 0.00282086 1.76712e+07 50.1771 0.00801668 0.995072 0 50.2152 GTEX-117YX-1626-SM-5GZZG 0 B1 1 piece, mucosa 8.3 Esophagus Esophagus - Mucosa 0006920 114 692 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 EXCLUDE 0.990841 295475 0.975894 0.99335 0.829309 21524 1 76 0.00224684 150 0 7.04332e+07 0.0236533 487211 7.09046e+07 8.85601e+06 21541 3.50424e+07 0 0.146585 0.99335 0.823794 7.04332e+07 0.00358585 1.57284e+07 9.40106e+06 1.58958e+07 161 1.59177e+07 1.38245e+07 0.00291466 1.58789e+07 49.939 0.00687136 0.995859 0 50.2647 GTEX-117YX-1726-SM-5GZZS 0 B1 2 pieces; patent lumens, but atherosclerotic; 40% adjacent fat 7.9 Blood Vessel Artery - Coronary 0001621 115 691 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99171 246204 0.977965 0.993718 0.844307 23528 1 76 0.0021161 208 0 8.7718e+07 0.0216033 407094 8.82725e+07 1.08186e+07 23551 4.36795e+07 0 0.133658 0.993718 0.839003 8.7718e+07 0.00305394 1.95685e+07 7.97118e+06 1.97136e+07 234 1.97574e+07 1.90855e+07 0.00258407 1.96963e+07 49.9226 0.00461179 0.995727 0 50.1847 GTEX-117YX-1826-SM-5H12K 0 B1 1 piece, muscularis 7.8 Esophagus Esophagus - Muscularis 0004648 116 690 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990195 171084 0.978576 0.992843 0.85564 21464 1 76 0.00204058 168 0 6.90397e+07 0.0210846 533317 6.95373e+07 9.29399e+06 21478 3.43562e+07 0 0.122936 0.992843 0.849516 6.90397e+07 0.00320802 1.50019e+07 5.90351e+06 1.51618e+07 170 1.51514e+07 1.30574e+07 0.00262274 1.51885e+07 50.0611 0.0076695 0.995492 0 50.265 GTEX-117YX-1926-SM-5GIEC 0 B1 4 pieces; well trimmed 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 116 690 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987475 166734 0.975052 0.990604 0.826197 22835 1 76 0.00279224 147 0 6.59094e+07 0.0247572 1.11279e+06 6.65345e+07 8.55834e+06 22854 3.27718e+07 0 0.148855 0.990604 0.818434 6.59094e+07 0.00382709 1.45751e+07 7.17093e+06 1.46358e+07 164 1.46044e+07 1.01604e+07 0.00330803 1.48093e+07 50.3484 0.016725 0.993734 0 50.104 GTEX-117YX-2026-SM-5GIEF 0 B1 2 pieces; spermatogenesis 6.8 Testis Testis 0000473 117 689 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.98936 251031 0.949225 0.991935 0.764992 28812 1 76 0.00288964 115 0 5.90793e+07 0.0505298 991241 5.95596e+07 7.6864e+06 28848 2.9396e+07 0 0.184233 0.991935 0.758822 5.90793e+07 0.00343622 1.27914e+07 8.12153e+06 1.28684e+07 128 1.29083e+07 8.94976e+06 0.00316222 1.28909e+07 49.9663 0.0166428 0.994509 0 50.1501 GTEX-117YX-2126-SM-5GIEL 1 B1 2 pieces 6.5 Spleen Spleen 0002106 120 686 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988598 179832 0.96383 0.990672 0.78126 23507 1 76 0.00353656 133 0 6.81492e+07 0.033695 420743 6.87909e+07 8.11861e+06 23536 3.38422e+07 0 0.18257 0.990672 0.773972 6.81492e+07 0.0041509 1.50388e+07 1.17237e+07 1.51334e+07 153 1.51634e+07 9.61477e+06 0.00384309 1.5145e+07 49.9695 0.00611626 0.992745 0 50.1568 GTEX-117YX-2226-SM-5EGJJ 0 B1 2 pieces, 1 with 20% fibrous tissue 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 144 662 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987482 334018 0.979992 0.991077 0.816417 22320 1 76 0.00198356 173 0 7.44918e+07 0.0196967 489635 7.51625e+07 6.20872e+06 22347 3.70201e+07 0 0.163576 0.991077 0.809132 7.44918e+07 0.00304518 1.64578e+07 7.95553e+06 1.66231e+07 178 1.66493e+07 1.38508e+07 0.00251245 1.66825e+07 50.0498 0.00651435 0.994672 0 50.2498 GTEX-117YX-2326-SM-5H12W 0 B1 4 pieces; well trimmed 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 147 659 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987662 212998 0.97474 0.990522 0.818799 22939 1 76 0.0022215 179 0 7.12971e+07 0.0250351 685275 7.19793e+07 8.9495e+06 22960 3.54526e+07 0 0.155941 0.990522 0.811038 7.12971e+07 0.00369191 1.56786e+07 7.40846e+06 1.57488e+07 181 1.57373e+07 1.14823e+07 0.00295458 1.58887e+07 50.2393 0.00952045 0.993381 0 50.1116 GTEX-117YX-2426-SM-5GZZJ 0 B1 2 pieces; well trimmed 7.3 Nerve Nerve - Tibial 0001323 149 657 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991113 213708 0.976781 0.993345 0.827639 22798 1 76 0.00206314 185 0 7.64164e+07 0.022913 359666 7.69284e+07 8.72039e+06 22824 3.80314e+07 0 0.149142 0.993345 0.822131 7.64164e+07 0.00332349 1.68741e+07 6.52524e+06 1.70426e+07 190 1.70361e+07 1.39423e+07 0.0026919 1.70456e+07 50.014 0.00467534 0.995578 0 50.2484 GTEX-117YX-2526-SM-5EQ4Q 0 B1 2 pieces, 1 with 40% fibrous tissue 8.3 Muscle Muscle - Skeletal 0011907 154 652 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99193 253830 0.983526 0.994426 0.871752 19422 1 76 0.00195754 180 0 6.61824e+07 0.0162382 848551 6.65533e+07 7.71174e+06 19427 3.29385e+07 0 0.111774 0.994426 0.866893 6.61824e+07 0.00289765 1.44277e+07 9.41073e+06 1.45604e+07 170 1.45274e+07 1.29234e+07 0.00242641 1.46133e+07 50.1474 0.0127499 0.996921 0 50.2289 GTEX-117YX-2626-SM-5EQ53 1 B1 2 pieces; no sclerosis, well trimmed 7.1 Blood Vessel Artery - Tibial 0007610 151 655 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990061 230748 0.977018 0.993265 0.839483 21007 1 76 0.00196716 170 0 7.34387e+07 0.0225549 267078 7.39367e+07 9.21937e+06 21022 3.65113e+07 0 0.137535 0.993265 0.833829 7.34387e+07 0.00297689 1.5813e+07 5.79756e+06 1.59604e+07 175 1.59798e+07 1.43152e+07 0.0024704 1.60159e+07 50.0565 0.00361225 0.996469 0 50.2319 GTEX-1192W-0001-SM-58Q7T B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1192W-0001-SM-5DWSN B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1192W-0001-SM-6WBTI B1 Blood Whole Blood 0013756 645 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1192W-0005-SM-5NQBQ B1 8 Blood Whole Blood 0013756 645 BP-39103 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.955354 451704 0.977321 0.958825 0.78972 18463 1 76 0.00264578 105 0 8.4174e+07 0.0215172 219172 8.77887e+07 1.37106e+07 18474 4.18188e+07 0 0.187601 0.958825 0.757203 8.4174e+07 0.00611466 1.94671e+07 1.34446e+08 1.97489e+07 136 1.97805e+07 2.16988e+07 0.00437395 1.97433e+07 49.9529 0.00249659 0.962296 0 50.3593 GTEX-1192W-0008-SM-5QGRE B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 810 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994211 314101 0.978332 0.995397 0.85344 19613 1 76 0.00160036 136 0 6.27473e+07 0.0213544 273903 6.30375e+07 4.49351e+06 19624 3.12783e+07 0 0.124893 0.995397 0.849511 6.27473e+07 0.00233576 1.41126e+07 8.5486e+06 1.41794e+07 136 1.41788e+07 1.60063e+07 0.00196763 1.41934e+07 50.0257 0.00434508 0.996583 0 50.1179 GTEX-1192W-0126-SM-5EGGS 1 B1 2 pieces, no major abnormalities 6.2 Thyroid Thyroid 0002046 674 636 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.975947 258203 0.961997 0.981873 0.698285 24498 1 76 0.00266812 121 0 6.64836e+07 0.0377208 303333 6.7711e+07 9.88726e+06 24544 3.29393e+07 0 0.263711 0.981873 0.685628 6.64836e+07 0.00598754 1.4381e+07 7.406e+06 1.45062e+07 133 1.46364e+07 9.28665e+06 0.00431781 1.46259e+07 49.9822 0.00447982 0.9878 0 50.2167 GTEX-1192W-0226-SM-5EGGT 1 B1 2 pieces, ~10% epicardial fat, delineated 6.8 Heart Heart - Atrial Appendage 0006631 675 635 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982614 160140 0.978549 0.98742 0.823487 21983 1 76 0.00254922 120 0 6.65437e+07 0.0212126 1.82193e+06 6.73915e+07 9.46868e+06 21998 3.30402e+07 0 0.155062 0.98742 0.813128 6.65437e+07 0.00578305 1.43979e+07 1.01024e+07 1.42351e+07 163 1.42653e+07 9.55728e+06 0.00415826 1.46454e+07 50.6574 0.0270351 0.992226 0 49.7157 GTEX-1192W-0826-SM-5EGHE 1 B1 6 pieces, ~20% fat/fibrous tissue, rep foci delineated 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 711 599 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.970338 151406 0.973463 0.97738 0.7764 23322 1 76 0.00284504 124 0 5.98043e+07 0.026318 1.46034e+06 6.11884e+07 1.04417e+07 23343 2.95812e+07 0 0.197062 0.97738 0.758838 5.98043e+07 0.00661266 1.3253e+07 1.00809e+07 1.33294e+07 147 1.34012e+07 7.01195e+06 0.00471527 1.35773e+07 50.3262 0.0238664 0.984422 0 50.1438 GTEX-1192W-2326-SM-5N9BS 2 B1 2 pieces, reduced spermatogenesis present, moderately autolyzed 6.5 Testis Testis 0000473 788 522 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990606 163092 0.967997 0.991562 0.70559 26376 1 76 0.00307669 144 0 7.80257e+07 0.0316794 294475 7.86896e+07 3.5624e+06 26427 3.88351e+07 0 0.262408 0.991562 0.699636 7.80257e+07 0.00356925 1.72014e+07 7.66272e+06 1.72384e+07 156 1.72078e+07 1.15014e+07 0.00332273 1.73066e+07 50.1431 0.00374223 0.992519 0 50.0536 GTEX-1192W-2626-SM-5Q5AF 0 B1 6 pieces, squamous epithelium is ~60-70microns thick, minimal adherent fat 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 810 500 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992534 161665 0.974445 0.993915 0.733893 24027 1 76 0.00208788 160 0 7.66454e+07 0.0252891 240991 7.71146e+07 5.05966e+06 24058 3.81576e+07 0 0.240552 0.993915 0.729427 7.66454e+07 0.00295895 1.69665e+07 7.94677e+06 1.70122e+07 167 1.69812e+07 1.17256e+07 0.00252281 1.71018e+07 50.1769 0.0031251 0.995295 0 50.0672 GTEX-1192W-3026-SM-5GZZV 1 B1 2 pieces, 4x2mm portion of neurohypophysis, delineated; rest is adenohypophysis 5.9 Pituitary Pituitary 0000007 857 453 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990243 338890 0.945779 0.992562 0.741344 24788 1 76 0.00233762 133 0 6.60448e+07 0.053831 378918 6.65397e+07 7.86177e+06 24823 3.28527e+07 0 0.204436 0.992562 0.73583 6.60448e+07 0.00363635 1.39702e+07 1.85031e+07 1.41596e+07 148 1.41966e+07 9.39545e+06 0.00298547 1.40821e+07 49.7975 0.00569462 0.994881 0 50.3366 GTEX-1192X-0004-SM-58Q7Q B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1192X-0004-SM-5DWSK B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1192X-0004-SM-6WBTF B1 Blood Whole Blood 0013756 757 BP-39104 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1192X-0005-SM-5NQC3 B1 8.3 Blood Whole Blood 0013756 757 BP-39103 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.943029 266960 0.987234 0.945071 0.822573 14522 1 76 0.0026588 96 0 9.97216e+07 0.00926193 54377 1.05518e+08 1.44989e+07 14522 4.95169e+07 0 0.164661 0.945071 0.77739 9.97216e+07 0.00571526 2.41171e+07 2.15338e+08 2.45127e+07 150 2.44589e+07 3.14148e+07 0.00418373 2.44042e+07 49.9439 0.000515336 0.947114 0 50.4068 GTEX-1192X-0008-SM-5Q5B7 B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 856 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.993306 416880 0.976543 0.995113 0.858365 20486 1 76 0.00152646 179 0 7.89336e+07 0.0230942 245500 7.93213e+07 5.43109e+06 20503 3.93165e+07 0 0.118178 0.995113 0.85417 7.89336e+07 0.00242582 1.76058e+07 1.18869e+07 1.76533e+07 172 1.76474e+07 2.05467e+07 0.00197532 1.77632e+07 50.1634 0.00309501 0.99692 0 50.0674 GTEX-1192X-0011-R10a-SM-CYKSL B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 RIP-Seq GTEX-1192X-0011-R10a-SM-DO941 B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99525 903331 0.964768 0.995944 0.876919 22876 1 76 0.00185472 272 0 9.14115e+07 0.0346513 2.80219e+06 9.17837e+07 5.59364e+06 22892 4.55468e+07 0 0.0878493 0.995944 0.873362 9.14115e+07 0.00233239 2.00354e+07 1.43272e+07 2.02121e+07 322 2.02371e+07 1.42256e+07 0.00209339 2.00648e+07 49.7863 0.0305303 0.996638 0 50.2195 GTEX-1192X-0011-R11b-SM-DO935 B1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 EXCLUDE 0.994849 751548 0.957199 0.995497 0.848986 22796 1 76 0.0019328 272 0 9.22871e+07 0.0421437 2.91942e+06 9.27046e+07 5.29553e+06 22813 4.59944e+07 0 0.108213 0.995497 0.845163 9.22871e+07 0.00227799 2.01092e+07 1.80084e+07 2.03323e+07 303 2.03362e+07 1.53339e+07 0.00210528 2.017e+07 49.7948 0.0314917 0.996145 0 50.2759 GTEX-1192X-0011-R5a-SM-DNZZA B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988557 704451 0.960401 0.992373 0.839317 24937 1 76 0.00233936 272 0 1.08253e+08 0.0391607 4.87563e+06 1.09085e+08 1.0028e+07 24961 5.37902e+07 0 0.121084 0.992373 0.832916 1.08253e+08 0.0044608 2.34644e+07 2.20742e+07 2.38865e+07 314 2.39172e+07 1.45631e+07 0.003396 2.37969e+07 49.8739 0.0446957 0.996189 0 50.4458 GTEX-1192X-0011-R6a-SM-DNZZB B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988555 614676 0.961468 0.992452 0.84211 24933 1 76 0.00236963 273 0 1.10211e+08 0.0381445 5.84448e+06 1.11049e+08 1.05376e+07 24962 5.47648e+07 0 0.119358 0.992452 0.835755 1.10211e+08 0.00454459 2.40211e+07 1.93953e+07 2.42462e+07 311 2.436e+07 1.43443e+07 0.00345284 2.42861e+07 49.924 0.0526295 0.99635 0 50.2332 GTEX-1192X-0011-R7b-SM-DNZZC B1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 762 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987557 737626 0.961757 0.991546 0.842781 24412 1 76 0.00249984 273 0 1.12722e+08 0.0378897 7.01224e+06 1.13683e+08 1.15023e+07 24433 5.59996e+07 0 0.118976 0.991546 0.835656 1.12722e+08 0.0043586 2.44677e+07 2.43677e+07 2.50773e+07 325 2.51082e+07 1.39613e+07 0.00342548 2.48315e+07 49.723 0.0616822 0.995534 0 50.6152 GTEX-1192X-0011-R8b-SM-DO11U B1, A1 8.2 Brain Brain - Hypothalamus 0001898 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987483 758981 0.95947 0.991823 0.843943 25087 1 76 0.00219497 273 0 9.73026e+07 0.0400046 3.49702e+06 9.81047e+07 8.84956e+06 25115 4.83214e+07 0 0.115527 0.991823 0.837043 9.73026e+07 0.00477626 2.13211e+07 1.75377e+07 2.14485e+07 298 2.15976e+07 1.5194e+07 0.00347997 2.15638e+07 49.9609 0.0356457 0.996164 0 50.1489 GTEX-1192X-0011-R9b-SM-DO934 B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 762 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995165 652448 0.960862 0.995841 0.830579 23889 1 76 0.0019308 391 0 9.9087e+07 0.0388107 3.65879e+06 9.95008e+07 5.66382e+06 23910 4.9398e+07 0 0.130283 0.995841 0.827125 9.9087e+07 0.0024029 2.19203e+07 1.32955e+07 2.22275e+07 334 2.20481e+07 1.40967e+07 0.00216669 2.21634e+07 50.1304 0.0367714 0.996517 0 50.3479 GTEX-1192X-0226-SM-5H12D 0 B1 6 pieces, trace adherent dermal fat 6 Skin Skin - Sun Exposed (Lower leg) 0004264 856 946 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987115 215667 0.973327 0.990075 0.789119 23624 1 76 0.00221877 186 0 7.87674e+07 0.026444 341576 7.95571e+07 9.70576e+06 23651 3.91553e+07 0 0.184208 0.990075 0.781286 7.87674e+07 0.00372263 1.72667e+07 8.90707e+06 1.73457e+07 187 1.73748e+07 1.2987e+07 0.00296845 1.74692e+07 50.1354 0.00429347 0.993034 0 50.1141 GTEX-1192X-0326-SM-5H11U 0 B1 2 pieces, adherent discontinuous rims of fat up to ~1mm, delineated 6.2 Nerve Nerve - Tibial 0001323 859 943 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990234 244937 0.971388 0.992493 0.778647 23088 1 76 0.00211636 164 0 7.15519e+07 0.028349 131572 7.20931e+07 8.80596e+06 23109 3.55964e+07 0 0.192741 0.992493 0.772801 7.15519e+07 0.00323457 1.57491e+07 7.57352e+06 1.58327e+07 165 1.58421e+07 1.21119e+07 0.0026742 1.58998e+07 50.091 0.00182503 0.994752 0 50.1324 GTEX-1192X-0426-SM-5GIEE 0 B1 2 pieces, 5-10% interstitial fat, rep. foci delineated 7.5 Muscle Muscle - Skeletal 0011907 859 943 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990398 182377 0.98276 0.992862 0.874503 19022 1 76 0.00244022 147 0 6.39848e+07 0.0169634 376901 6.44448e+07 7.73963e+06 19029 3.1848e+07 0 0.108256 0.992862 0.868262 6.39848e+07 0.00313202 1.39666e+07 8.21831e+06 1.39946e+07 156 1.40004e+07 1.31514e+07 0.00278526 1.41072e+07 50.19 0.00584843 0.995327 0 50.0501 GTEX-1192X-0726-SM-5987R 1 B1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 882 920 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986448 271762 0.981798 0.991649 0.843686 21119 1 76 0.00257228 154 0 7.63365e+07 0.0179375 1.31491e+06 7.69793e+07 1.62978e+07 21134 3.7892e+07 0 0.138112 0.991649 0.836641 7.63365e+07 0.00666631 1.6046e+07 1.08052e+07 1.58621e+07 181 1.59786e+07 1.25205e+07 0.00460856 1.62753e+07 50.4598 0.0170813 0.99685 0 49.7119 GTEX-1192X-1026-SM-5H12P 1 B1 2 pieces diffuse established cirrhosis, and macrovesicular steatosis 6 Liver Liver 0001114 889 913 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 EXCLUDE 0.988434 274767 0.975399 0.991539 0.827567 23149 1 76 0.00214396 152 0 6.74009e+07 0.0241888 158370 6.79761e+07 8.20351e+06 23164 3.34795e+07 0 0.147832 0.991539 0.820565 6.74009e+07 0.00362716 1.48302e+07 6.45587e+06 1.49292e+07 156 1.49837e+07 1.34656e+07 0.00288323 1.49842e+07 50.0009 0.00232979 0.994643 0 50.1664 GTEX-1192X-1126-SM-5EGGU 1 B1 2 pieces, no significant abnormalities 6.8 Thyroid Thyroid 0002046 882 920 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983677 155452 0.966797 0.988899 0.789334 23303 1 76 0.00238065 120 0 5.82461e+07 0.032873 107868 5.89e+07 9.26154e+06 23324 2.88935e+07 0 0.177463 0.988899 0.780571 5.82461e+07 0.0053868 1.26748e+07 7.13243e+06 1.279e+07 122 1.289e+07 1.12116e+07 0.00387579 1.28634e+07 49.9483 0.00183138 0.99412 0 50.2263 GTEX-1192X-1526-SM-5H11I 1 B1 2 pieces, prominent mesothelial fibrosis/hyperplasia, delineated 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 910 892 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987187 185068 0.97848 0.990408 0.783512 22924 1 76 0.00226223 148 0 7.15545e+07 0.021159 280382 7.22475e+07 8.7963e+06 22947 3.55527e+07 0 0.194968 0.990408 0.775997 7.15545e+07 0.00351967 1.58417e+07 9.11086e+06 1.59155e+07 161 1.59871e+07 1.29311e+07 0.0028889 1.60011e+07 50.022 0.00388085 0.993629 0 50.1162 GTEX-1192X-1826-SM-5GIE2 1 B1 6 pieces, all muscularis, good specimens 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 928 874 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988135 209345 0.971242 0.991096 0.812027 22249 1 76 0.00272787 127 0 6.06417e+07 0.0285178 644275 6.11865e+07 7.45856e+06 22264 3.01409e+07 0 0.159214 0.991096 0.804797 6.06417e+07 0.00352732 1.31054e+07 6.92418e+06 1.31814e+07 143 1.31948e+07 1.01015e+07 0.0031264 1.32641e+07 50.131 0.0105297 0.994057 0 50.1446 GTEX-1192X-2326-SM-5987X 1 B1 2 pieces, gynecomatoid stromal hyperplasia (encircled), ductal elements present (delineated) 6.2 Breast Breast - Mammary Tissue 0008367 940 862 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986846 477084 0.971424 0.991039 0.780203 24355 1 76 0.00265025 166 0 8.51135e+07 0.0282869 446190 8.58831e+07 1.53132e+07 24393 4.22476e+07 0 0.191221 0.991039 0.773211 8.51135e+07 0.00612398 1.86402e+07 1.23475e+07 1.87321e+07 184 1.87817e+07 1.43205e+07 0.00437977 1.89319e+07 50.1992 0.00519532 0.995231 0 50.123 GTEX-1192X-2526-SM-59868 3 B1 6 pieces, epithelial component completely autolyzed, abundant lymphoid elements present, rep foci delineated 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 952 850 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.980833 228083 0.972199 0.985537 0.808212 24513 1 76 0.0027201 154 0 7.616e+07 0.0274467 558192 7.72776e+07 1.61759e+07 24538 3.77866e+07 0 0.163987 0.985537 0.796523 7.616e+07 0.0064038 1.64846e+07 8.73634e+06 1.66045e+07 167 1.66715e+07 1.33746e+07 0.00455316 1.67573e+07 50.1282 0.0072232 0.990241 0 50.1812 GTEX-1192X-2726-SM-5N9DN 0 B1 6 pieces, trace adherent dermal fat. Squamous epithelium averages ~50 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 953 849 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988065 225169 0.974811 0.988902 0.785881 23196 1 76 0.00291886 173 0 7.83834e+07 0.0249905 472586 7.9263e+07 3.66681e+06 23219 3.90198e+07 0 0.18893 0.988902 0.77716 7.83834e+07 0.00350441 1.737e+07 8.86324e+06 1.74141e+07 185 1.73375e+07 1.23102e+07 0.00321139 1.75157e+07 50.2556 0.00596225 0.98974 0 50.0633 GTEX-1192X-2926-SM-5N9BA 1 B1 2 pieces, ~10-15% mucinous glands, all in one section, delineated; rest is skeletal/adipose tissue 8 Salivary Gland Minor Salivary Gland 0006330 958 844 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990063 199536 0.974143 0.990938 0.810756 22462 1 76 0.00286218 170 0 8.07276e+07 0.0254582 342444 8.14658e+07 3.53501e+06 22486 4.02171e+07 0 0.163387 0.990938 0.803409 8.07276e+07 0.00333262 1.81209e+07 9.93577e+06 1.8215e+07 181 1.81708e+07 1.57063e+07 0.0030972 1.82362e+07 50.0898 0.00420353 0.991813 0 50.1294 GTEX-1192X-3026-SM-5N9BM 2 B1 2 pieces, autolyzing adenohypophysis 7 Pituitary Pituitary 0000007 987 815 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988856 267465 0.967252 0.989807 0.798033 24738 1 76 0.00272512 154 0 8.11534e+07 0.0324541 118528 8.19891e+07 3.92846e+06 24769 4.03993e+07 0 0.169219 0.989807 0.789899 8.11534e+07 0.00340407 1.64474e+07 9.4462e+06 1.64971e+07 171 1.64695e+07 1.55817e+07 0.00306427 1.65534e+07 50.1271 0.00144566 0.990759 0 50.0755 GTEX-1192X-3126-SM-5N9BY 1 B1 2 pieces, ~5-10% adherent meninges, delineated 7.1 Brain Brain - Cortex 0001870 989 813 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993036 272682 0.960598 0.993821 0.810165 23797 1 76 0.00284662 200 0 7.37212e+07 0.0390668 1.6983e+06 7.41796e+07 3.41502e+06 23819 3.67283e+07 0 0.150433 0.993821 0.805159 7.37212e+07 0.0032972 1.61599e+07 1.0841e+07 1.62844e+07 203 1.62007e+07 9.8858e+06 0.00307173 1.62994e+07 50.1517 0.0228944 0.994605 0 50.1919 GTEX-1192X-3226-SM-5987D 1 B1 2 pieces, Purkinje cells well visualized 5.9 Brain Brain - Cerebellum 0002037 989 813 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984573 308960 0.951686 0.988589 0.757435 22988 1 76 0.00292523 128 0 7.04178e+07 0.0479102 1.01132e+06 7.12306e+07 1.43516e+07 23010 3.4965e+07 0 0.194251 0.988589 0.748792 7.04178e+07 0.00635223 1.53104e+07 1.05607e+07 1.53159e+07 153 1.54107e+07 9.25498e+06 0.00463177 1.54757e+07 50.1051 0.0141978 0.992605 0 50.009 GTEX-11DXW-0003-SM-58Q7S C1 Blood Whole Blood 0013756 1076 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXW-0003-SM-5DWSM C1 Blood Whole Blood 0013756 1076 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11DXW-0006-SM-5NQ7Y C1 8.5 Blood Whole Blood 0013756 1076 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.988585 841985 0.959728 0.990252 0.765478 20098 1 76 0.00240676 127 0 7.49335e+07 0.0397575 202834 7.56712e+07 5.84773e+06 20110 3.72996e+07 0 0.19425 0.990252 0.758016 7.49335e+07 0.00358549 1.65616e+07 5.89506e+07 1.68886e+07 141 1.68857e+07 1.55353e+07 0.00299513 1.67122e+07 49.7419 0.00268047 0.991919 0 50.4888 GTEX-11DXW-0008-SM-5Q59V C1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 1091 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.984589 1.50592e+06 0.872123 0.986926 0.715705 20655 1 76 0.00153109 144 0 8.15542e+07 0.127017 393554 8.26346e+07 6.46599e+06 20664 4.05813e+07 0 0.156417 0.986926 0.706348 8.15542e+07 0.00256246 1.59846e+07 1.07897e+08 1.67384e+07 144 1.67652e+07 1.75549e+07 0.00204555 1.61542e+07 49.072 0.00476258 0.989263 0 51.1519 GTEX-11DXW-0011-R10a-SM-AHZNX C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1080 ChIP-Seq GTEX-11DXW-0011-R1a-SM-DNZZD C1, A1 7.5 Brain Brain - Hippocampus 0001954 1080 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989099 530455 0.965193 0.992602 0.855374 23479 1 76 0.00246597 271 0 9.86168e+07 0.0344972 9.02667e+06 9.93518e+07 8.55692e+06 23497 4.90241e+07 0 0.109818 0.992602 0.849047 9.86168e+07 0.00418961 2.1514e+07 2.13656e+07 2.20606e+07 312 2.20586e+07 9.35462e+06 0.00332475 2.18077e+07 49.7141 0.0908557 0.996106 0 50.6272 GTEX-11DXW-0011-R3b-SM-DNZZE C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1080 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989198 588268 0.961249 0.992606 0.847432 24070 1 76 0.00244151 271 0 9.54121e+07 0.0384387 6.0545e+06 9.61228e+07 8.35385e+06 24092 4.74304e+07 0 0.113816 0.992606 0.841167 9.54121e+07 0.00413852 2.07204e+07 1.91449e+07 2.11681e+07 312 2.11606e+07 9.93931e+06 0.0032871 2.10064e+07 49.8171 0.0629871 0.996015 0 50.5343 GTEX-11DXW-0011-R5b-SM-DO11D C1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987592 525386 0.965928 0.991714 0.837143 23730 1 76 0.00262029 271 0 1.07217e+08 0.033881 8.98195e+06 1.08113e+08 1.10987e+07 23750 5.32643e+07 0 0.128785 0.991714 0.830206 1.07217e+08 0.00461509 2.30358e+07 3.0903e+07 2.38867e+07 323 2.37442e+07 8.22005e+06 0.00361354 2.35252e+07 49.7684 0.0830795 0.995835 0 50.9067 GTEX-11DXW-0011-R6a-SM-DO11N C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986404 668901 0.963335 0.991024 0.841065 25273 1 76 0.00246748 377 0 1.24009e+08 0.0364065 7.64677e+06 1.25132e+08 1.26249e+07 25296 6.15756e+07 0 0.12227 0.991024 0.833516 1.24009e+08 0.00502851 2.70715e+07 2.63654e+07 2.75744e+07 340 2.75978e+07 1.19754e+07 0.00374202 2.75333e+07 49.9415 0.0611098 0.995645 0 50.4602 GTEX-11DXW-0011-R7b-SM-DO119 C1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1080 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.98808 484736 0.967627 0.992279 0.842352 22994 1 76 0.00255395 374 0 1.03705e+08 0.03223 9.43552e+06 1.04512e+08 9.74391e+06 23013 5.1528e+07 0 0.125275 0.992279 0.835849 1.03705e+08 0.00481472 2.24762e+07 3.1624e+07 2.30455e+07 331 2.30267e+07 6.96975e+06 0.00367955 2.28398e+07 49.7962 0.0902819 0.996479 0 50.6253 GTEX-11DXW-0226-SM-5H122 1 C1 6 pieces, well trimmed, squamous epithelium measures up to 70 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1089 1347 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988433 248790 0.974062 0.991679 0.808707 23144 1 76 0.00210845 175 0 6.94072e+07 0.0257405 224974 6.99895e+07 8.57039e+06 23168 3.44867e+07 0 0.165355 0.991679 0.801978 6.94072e+07 0.00368546 1.52339e+07 7.27642e+06 1.53369e+07 171 1.53689e+07 1.17084e+07 0.00289437 1.54262e+07 50.093 0.0032144 0.994926 0 50.1685 GTEX-11DXW-0326-SM-5H11W 1 C1 2 pieces, ~20 and 30% fibrous with few larger vessels 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1092 1345 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991452 179774 0.973575 0.993494 0.792967 22806 1 76 0.00219603 141 0 6.74092e+07 0.0260991 251194 6.78506e+07 8.21688e+06 22828 3.35644e+07 0 0.180608 0.993494 0.787808 6.74092e+07 0.00322581 1.47692e+07 6.57861e+06 1.48334e+07 156 1.48656e+07 1.12571e+07 0.00270986 1.48668e+07 50.0021 0.00370216 0.995537 0 50.1086 GTEX-11DXW-0426-SM-5H12E 1 C1 2 pieces 7.2 Nerve Nerve - Tibial 0001323 1094 1343 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98858 256710 0.964358 0.991736 0.74204 24307 1 76 0.00219322 162 0 7.2447e+07 0.0353698 210184 7.30507e+07 8.72477e+06 24350 3.60024e+07 0 0.222318 0.991736 0.735908 7.2447e+07 0.00363686 1.58194e+07 6.7426e+06 1.59186e+07 165 1.59662e+07 1.08664e+07 0.00291275 1.59903e+07 50.0376 0.00287723 0.994891 0 50.1563 GTEX-11DXW-0526-SM-5H127 1 C1 2 pieces, few foci of calcification, small attachment of fibrofatty tissue 7.8 Blood Vessel Artery - Tibial 0007610 1096 1342 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990906 246129 0.975706 0.993114 0.844744 21239 1 76 0.00194667 165 0 7.63256e+07 0.0238893 358020 7.68549e+07 9.22558e+06 21250 3.79745e+07 0 0.130962 0.993114 0.838926 7.63256e+07 0.00330044 1.62615e+07 5.99694e+06 1.64004e+07 183 1.63793e+07 1.50287e+07 0.00262205 1.64483e+07 50.1052 0.00465839 0.995322 0 50.2126 GTEX-11DXW-0626-SM-5N9ER 1 C1 2 pieces, one piece has large central defect (?poor fixation), 2nd is ~10-20% fibrous, no ductal elements noted 5.7 Breast Breast - Mammary Tissue 0008367 1102 1337 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987049 309144 0.972958 0.988482 0.74042 25071 1 76 0.00414016 206 0 9.05941e+07 0.0267682 655150 9.16497e+07 4.55013e+06 25121 4.50006e+07 0 0.232538 0.988482 0.731892 9.05941e+07 0.00428463 2.01157e+07 9.87528e+06 2.01649e+07 211 2.01332e+07 1.23769e+07 0.00421229 2.02739e+07 50.1741 0.00714841 0.989915 0 50.061 GTEX-11DXW-0726-SM-5H12J 1 C1 2 pieces, one piece is 10-20% internal fat/vessels 8.2 Muscle Muscle - Skeletal 0011907 1105 1334 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.993159 226997 0.982188 0.994983 0.869412 20259 1 76 0.00194913 199 0 8.74485e+07 0.0176018 882693 8.78894e+07 9.54564e+06 20274 4.3572e+07 0 0.112776 0.994983 0.865051 8.74485e+07 0.0028151 1.89672e+07 1.01567e+07 1.89209e+07 249 1.89273e+07 1.80998e+07 0.00238132 1.91099e+07 50.24 0.0100432 0.996808 0 49.9388 GTEX-11DXW-0726-SM-CYKR5 1 C1 2 pieces, one piece is 10-20% internal fat/vessels 8.2 Muscle Muscle - Skeletal 0011907 1105 1334 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 RIP-Seq GTEX-11DXW-0826-SM-5H118 1 C1 6 pieces, few pieces include up to 5-10% fat, rare fungal elements 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1107 1333 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989557 266176 0.976552 0.991942 0.75666 24581 1 76 0.00226044 169 0 8.00907e+07 0.023216 347739 8.07413e+07 9.77353e+06 24611 3.98466e+07 0 0.219892 0.991942 0.750564 8.00907e+07 0.00351729 1.77095e+07 8.93209e+06 1.78546e+07 182 1.78912e+07 1.2616e+07 0.00288735 1.78564e+07 49.9513 0.00430683 0.994328 0 50.2041 GTEX-11DXW-1026-SM-5H11K 1 C1 4 pieces, no abnormalities noted 6 Brain Brain - Cerebellum 0002037 1135 1306 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98896 473487 0.92882 0.991111 0.693857 23630 1 76 0.00245943 129 0 6.84744e+07 0.0708697 924624 6.90886e+07 8.60463e+06 23655 3.40674e+07 0 0.234964 0.991111 0.687689 6.84744e+07 0.00343823 1.448e+07 2.39535e+07 1.4675e+07 151 1.47121e+07 7.41478e+06 0.00294777 1.45814e+07 49.777 0.0133832 0.993261 0 50.3344 GTEX-11DXW-1126-SM-5H12Q 1 C1 4 pieces, adherent meninges 6.6 Brain Brain - Cortex 0001870 1137 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991852 338198 0.964549 0.994007 0.820932 24450 1 76 0.00226502 268 0 9.45202e+07 0.0351258 3.96889e+06 9.50901e+07 1.24823e+07 24474 4.70568e+07 0 0.143617 0.994007 0.816012 9.45202e+07 0.00324138 2.08256e+07 1.73331e+07 2.07711e+07 325 2.07689e+07 1.02663e+07 0.00275214 2.10184e+07 50.2986 0.0417382 0.996162 0 49.9345 GTEX-11DXW-1126-SM-CYKSD 1 C1 4 pieces, adherent meninges 6.6 Brain Brain - Cortex 0001870 1137 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 RIP-Seq GTEX-11DXW-1226-SM-5H133 1 C1 2 pieces, predominantly adenohypophysis, small detached fragment of neurohypophysis 7 Pituitary Pituitary 0000007 1138 1304 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990885 342983 0.954915 0.993119 0.737297 25778 1 76 0.00219101 158 0 7.96937e+07 0.0448457 281513 8.02458e+07 9.65204e+06 25819 3.9646e+07 0 0.217618 0.993119 0.732224 7.96937e+07 0.00345534 1.63977e+07 1.10644e+07 1.6535e+07 179 1.65794e+07 1.18962e+07 0.00282176 1.65247e+07 49.9174 0.00350813 0.995354 0 50.2084 GTEX-11DXX-0004-SM-58Q7I B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXX-0004-SM-5DWSD B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXX-0004-SM-6WBT9 B1 Blood Whole Blood 0013756 -32 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11DXX-0005-SM-5NQ8B B1 8.6 Blood Whole Blood 0013756 -32 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.988389 787748 0.953893 0.990389 0.801782 18412 1 76 0.00237965 123 0 7.46074e+07 0.045544 388777 7.53315e+07 5.63443e+06 18420 3.71315e+07 0 0.152112 0.990389 0.794076 7.46074e+07 0.00359183 1.63195e+07 4.94769e+07 1.64757e+07 147 1.64772e+07 1.5621e+07 0.00298452 1.64814e+07 50.0064 0.00516088 0.992389 0 50.238 GTEX-11DXX-0008-SM-5Q5B8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 161 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992216 448146 0.976879 0.994477 0.86429 20138 1 76 0.00151987 156 0 7.66322e+07 0.0227771 252504 7.70578e+07 5.505e+06 20152 3.81466e+07 0 0.112589 0.994477 0.859516 7.66322e+07 0.00241835 1.71694e+07 1.22454e+07 1.72297e+07 164 1.72438e+07 2.0268e+07 0.00196809 1.73366e+07 50.1342 0.00327681 0.996738 0 50.0876 GTEX-11DXX-0126-SM-5EGH7 0 B1 2 pieces, mild-moderate medullary hyperplasia 8.8 Adrenal Gland Adrenal Gland 0002369 82 531 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.988744 184440 0.977054 0.992579 0.841254 22386 1 76 0.00227616 124 0 5.98722e+07 0.0225406 789182 6.03199e+07 8.18e+06 22400 2.97568e+07 0 0.1358 0.992579 0.835011 5.98722e+07 0.00488367 1.33229e+07 7.12452e+06 1.32272e+07 139 1.32715e+07 1.07931e+07 0.00357488 1.34808e+07 50.3911 0.0130833 0.996413 0 49.8199 GTEX-11DXX-0226-SM-5P9HL 0 B1 2 pieces, some fibrosis 6.5 Thyroid Thyroid 0002046 84 529 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991437 237595 0.972107 0.992013 0.779494 24872 1 76 0.00323897 277 0 1.16255e+08 0.027639 561584 1.17191e+08 4.02152e+06 24918 5.79128e+07 0 0.192613 0.992013 0.773268 1.16255e+08 0.00357543 2.55797e+07 1.11758e+07 2.57957e+07 324 2.5629e+07 1.82329e+07 0.0034071 2.58105e+07 50.1764 0.00479205 0.992589 0 50.2103 GTEX-11DXX-0326-SM-5PNWC 0 B1 2 pieces, focal/mild interstitial fibrosis 7.8 Heart Heart - Left Ventricle 0006566 86 527 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990328 217185 0.985158 0.992021 0.851739 19635 1 76 0.00210819 270 0 8.04264e+07 0.0146458 2.03926e+06 8.10733e+07 7.46910e+06 19643 4.00741e+07 0 0.133419 0.992021 0.844942 8.04264e+07 0.00305209 1.74884e+07 3.00482e+07 1.76358e+07 269 1.74773e+07 1.17185e+07 0.00257933 1.77755e+07 50.423 0.0251533 0.993713 0 50.2098 GTEX-11DXX-0426-SM-5EQ5F 0 B1 6 pieces 7.2 Blood Vessel Artery - Aorta 0001496 90 523 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991915 255948 0.975178 0.994321 0.831921 21109 1 76 0.00191322 131 0 6.19366e+07 0.0244876 220597 6.22903e+07 7.64972e+06 21122 3.08146e+07 0 0.143256 0.994321 0.827196 6.19366e+07 0.0029697 1.34782e+07 4.74233e+06 1.35963e+07 147 1.35786e+07 1.12758e+07 0.00244019 1.36401e+07 50.113 0.00354143 0.996727 0 50.218 GTEX-11DXX-0526-SM-5PNVR 0 B1 2 pieces, one piece is up to 30% fat (internal and attached), interstitial fibrosis 6.4 Heart Heart - Atrial Appendage 0006631 86 527 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992308 196058 0.978796 0.9943 0.84314 20691 1 76 0.0020837 198 0 7.32676e+07 0.0207761 1.32037e+06 7.36876e+07 6.67667e+06 20701 3.64875e+07 0 0.135656 0.9943 0.838334 7.32676e+07 0.00310868 1.55885e+07 1.60705e+07 1.58622e+07 210 1.56801e+07 1.12695e+07 0.00259516 1.5893e+07 50.3371 0.0179185 0.996292 0 50.4352 GTEX-11DXX-0626-SM-5Q5AG 0 B1 2 pieces, some emphysematous change, congestion, minute bone marrow embolism 6 Lung Lung 0008952 93 520 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989664 152432 0.973404 0.992205 0.812587 23047 1 76 0.00192141 136 0 6.74479e+07 0.0262514 294671 6.79778e+07 5.19673e+06 23067 3.35567e+07 0 0.160817 0.992205 0.806253 6.74479e+07 0.00286542 1.4913e+07 5.48902e+06 1.50023e+07 158 1.49869e+07 1.22626e+07 0.0023922 1.50932e+07 50.1768 0.00433482 0.994746 0 50.1492 GTEX-11DXX-0726-SM-5H12X 0 B1 2 pieces 5.8 Spleen Spleen 0002106 95 518 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987234 242973 0.962763 0.990676 0.741138 23639 1 76 0.00241396 130 0 6.57745e+07 0.0367475 479227 6.63936e+07 8.44193e+06 23671 3.26737e+07 0 0.221625 0.990676 0.734227 6.57745e+07 0.00378772 1.44141e+07 7.94774e+06 1.44562e+07 151 1.44993e+07 9.25779e+06 0.00309845 1.45894e+07 50.155 0.00721797 0.994117 0 50.073 GTEX-11DXX-0826-SM-5GZZP 0 B1 4 pieces, calcific atherosclerosis with narrowing of the lumen ~60%, attached adipose tissue up to 2 mm 7.3 Blood Vessel Artery - Coronary 0001621 98 515 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990667 240160 0.976341 0.9934 0.850796 22074 1 76 0.00195671 171 0 7.92629e+07 0.0232967 365469 7.97896e+07 9.67004e+06 22084 3.94302e+07 0 0.125545 0.9934 0.84518 7.92629e+07 0.00333696 1.71697e+07 6.13604e+06 1.73403e+07 188 1.73328e+07 1.64794e+07 0.00264494 1.7388e+07 50.0795 0.00458041 0.996133 0 50.2471 GTEX-11DXX-0926-SM-5H112 1 B1 2 pieces, up to 20% fat, PanIN-1B, diffuse insular amyloidosis, acinar cell nodules 7.1 Pancreas Pancreas 0001150 100 513 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989746 234282 0.98092 0.99266 0.858749 21214 1 76 0.00219022 111 0 8.64675e+07 0.0186951 211221 8.71068e+07 1.23177e+07 21227 4.30126e+07 0 0.122171 0.99266 0.852446 8.64675e+07 0.00333803 1.99871e+07 2.9657e+07 2.02213e+07 135 2.02364e+07 2.66053e+07 0.00276244 2.02232e+07 49.9837 0.00242485 0.995574 0 50.2912 GTEX-11DXX-1026-SM-5H11E 0 B1 6 pieces, well trimmed 8.5 Esophagus Esophagus - Muscularis 0004648 103 510 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990408 288959 0.977747 0.993049 0.845256 21949 1 76 0.00202018 211 0 8.45858e+07 0.0219449 636164 8.51779e+07 1.17369e+07 21967 4.20934e+07 0 0.132491 0.993049 0.839381 8.45858e+07 0.00300348 1.82648e+07 7.53237e+06 1.83528e+07 249 1.83634e+07 1.55641e+07 0.00251052 1.84678e+07 50.1418 0.00746865 0.99569 0 50.1201 GTEX-11DXX-1126-SM-5GZZK 1 B1 6 pieces, acute erosive esophagitis, oncocytic metaplasia of submucosal glands 9.1 Esophagus Esophagus - Mucosa 0006920 105 508 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988642 281343 0.977672 0.990911 0.851169 22634 1 76 0.00216748 281 0 9.20029e+07 0.0219448 465783 9.28468e+07 1.26409e+07 22651 4.58058e+07 0 0.126503 0.990911 0.843433 9.20029e+07 0.0031569 2.0756e+07 1.44790e+07 2.08867e+07 259 2.09532e+07 1.99931e+07 0.00266106 2.08864e+07 49.9202 0.00501668 0.993179 0 50.157 GTEX-11DXX-1226-SM-5GICD 1 B1 6 pieces, detached fragments of squamous cells/neutrophils 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 109 504 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991836 273647 0.978363 0.99409 0.856533 22092 1 76 0.00252393 212 0 8.34248e+07 0.021342 535837 8.39208e+07 9.97655e+06 22108 4.15317e+07 0 0.121829 0.99409 0.851471 8.34248e+07 0.00310473 1.82878e+07 7.49401e+06 1.83863e+07 241 1.83907e+07 1.62226e+07 0.00281367 1.84646e+07 50.1002 0.00638503 0.996343 0 50.1343 GTEX-11DXX-1326-SM-5GIDZ 1 B1 6 pieces, mild chronic active gastritis 6.2 Stomach Stomach 0000945 112 501 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988905 231980 0.971561 0.99085 0.805481 22510 1 76 0.00309247 164 0 6.08174e+07 0.0273537 513687 6.1379e+07 7.43367e+06 22529 3.02569e+07 0 0.16608 0.99085 0.798111 6.08174e+07 0.0036281 1.36554e+07 1.89461e+07 1.366e+07 146 1.36667e+07 1.05774e+07 0.00335976 1.37653e+07 50.1799 0.00836909 0.992796 0 50.0085 GTEX-11DXX-1426-SM-5GIDU 1 B1 3 pieces, corpora albicantia/corpora fibrosa, hilum 7.3 Ovary Ovary 0000992 117 496 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991085 240775 0.972823 0.993528 0.810492 23092 1 76 0.00252808 147 0 7.06202e+07 0.0268586 130086 7.10802e+07 8.04536e+06 23122 3.51425e+07 0 0.162332 0.993528 0.805246 7.06202e+07 0.00325676 1.56144e+07 7.01944e+06 1.56986e+07 155 1.57377e+07 1.40827e+07 0.00289152 1.57434e+07 50.0091 0.00183013 0.995972 0 50.1346 GTEX-11DXX-1526-SM-5H115 1 B1 2 pieces, cellular leiomyoma, myometrium only 7.7 Uterus Uterus 0000995 118 495 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98997 295468 0.971167 0.992731 0.792097 23726 1 76 0.00208703 284 0 9.48279e+07 0.0285352 159743 9.55223e+07 1.29016e+07 23765 4.71833e+07 0 0.17907 0.992731 0.786339 9.48279e+07 0.00326634 2.06969e+07 8.70222e+06 2.08806e+07 262 2.09278e+07 1.70284e+07 0.00267505 2.08981e+07 49.9646 0.00167231 0.995492 0 50.2209 GTEX-11DXX-1626-SM-5H11H 1 B1 6 pieces, good representation of lymphoid tissue, detached fragment of muscularis 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 124 489 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988295 281610 0.971043 0.991388 0.785057 24730 1 76 0.00242831 279 0 9.63063e+07 0.028463 915952 9.71429e+07 1.33906e+07 24767 4.78945e+07 0 0.185986 0.991388 0.778296 9.63063e+07 0.00345651 2.12711e+07 1.26892e+07 2.14442e+07 274 2.14605e+07 1.47276e+07 0.0029408 2.15334e+07 50.0848 0.00942892 0.99448 0 50.2026 GTEX-11DXX-1726-SM-5H11T 1 B1 6 pieces 7.4 Vagina Vagina 0000996 125 488 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991338 202520 0.977695 0.993233 0.816919 23364 1 76 0.00215413 146 0 7.09115e+07 0.0219113 186615 7.13947e+07 8.09844e+06 23383 3.53138e+07 0 0.160776 0.993233 0.811391 7.09115e+07 0.00316926 1.58843e+07 6.89387e+06 1.59961e+07 162 1.60125e+07 1.34935e+07 0.00266072 1.59976e+07 49.9767 0.00261385 0.995127 0 50.1754 GTEX-11DXX-1826-SM-5H126 1 B1 6 pieces, mucosa and submucosa 7 Colon Colon - Transverse 0001157 127 486 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990582 179213 0.976364 0.992728 0.83887 22452 1 76 0.00242605 210 0 7.68006e+07 0.0226828 1.42217e+06 7.73632e+07 9.39913e+06 22477 3.82173e+07 0 0.137494 0.992728 0.83277 7.68006e+07 0.00351962 1.71454e+07 1.01912e+07 1.71975e+07 230 1.71523e+07 1.14306e+07 0.00297165 1.734e+07 50.272 0.018383 0.994875 0 50.0759 GTEX-11DXX-1926-SM-5EGJK 1 B1 6 pieces, well trimmed, but detached fragments of colonic epithelium 7.4 Colon Colon - Sigmoid 0001159 131 482 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990611 252445 0.975406 0.992781 0.837354 22406 1 76 0.00178137 218 0 8.11256e+07 0.0243007 462379 8.17155e+07 6.37006e+06 22426 4.03856e+07 0 0.138051 0.992781 0.83131 8.11256e+07 0.00265711 1.75928e+07 7.23678e+06 1.77167e+07 232 1.76799e+07 1.51522e+07 0.00221828 1.77913e+07 50.157 0.0056584 0.994951 0 50.1754 GTEX-11DXX-2026-SM-5EGJL 1 B1 2 pieces, several prominent vessels, small omental lymph nodes 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 132 481 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989466 230499 0.979023 0.992874 0.856321 22201 1 76 0.00181341 166 0 7.23199e+07 0.0206936 636617 7.2839e+07 6.60438e+06 22213 3.59567e+07 0 0.122702 0.992874 0.850219 7.23199e+07 0.00284362 1.5932e+07 7.47408e+06 1.60161e+07 187 1.59949e+07 1.35706e+07 0.00232675 1.61794e+07 50.2867 0.00874006 0.996282 0 50.1317 GTEX-11DXX-2126-SM-5PNYR 0 B1 6 pieces, up to 10% attached fat, abundant adnexal structures 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 136 477 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992997 176992 0.973983 0.993898 0.818511 23687 1 76 0.00311961 291 0 9.64807e+07 0.025803 566778 9.70729e+07 2.63548e+06 23716 4.80845e+07 0 0.155472 0.993898 0.813517 9.64807e+07 0.00351997 2.12651e+07 1.00604e+07 2.14755e+07 274 2.13708e+07 1.75255e+07 0.00331961 2.14526e+07 50.0955 0.00583868 0.9948 0 50.2461 GTEX-11DXX-2326-SM-5Q5A2 1 B1 2 pieces, few large vessels and nerve, central holes 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 159 454 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.990445 235034 0.978961 0.992514 0.83346 22013 1 76 0.00178364 213 0 8.41402e+07 0.0207269 238730 8.47749e+07 6.03007e+06 22031 4.1888e+07 0 0.1455 0.992514 0.827221 8.41402e+07 0.00274821 1.86277e+07 7.91545e+06 1.87391e+07 234 1.87266e+07 1.62063e+07 0.00226492 1.88118e+07 50.1135 0.00281605 0.994583 0 50.1491 GTEX-11DXX-2326-SM-9YFKS 1 B1 2 pieces, few large vessels and nerve, central holes 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 159 454 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.979948 5.79634e+06 0.83351 0.981318 0.66408 22783 1 76 0.0028029 281 0 1.3666e+08 0.165537 1.39808e+06 1.39262e+08 1.6397e+07 22806 6.80915e+07 0 0.16943 0.981318 0.651674 1.3666e+08 0.00355334 2.53201e+07 2.62339e+08 2.61827e+07 312 2.61371e+07 1.8522e+07 0.0031776 2.5636e+07 49.516 0.0100392 0.982689 0 50.8375 GTEX-11DXX-2426-SM-5GZZW 1 B1 6 pieces, some with attached fat (up to 10%), squamous epithelium measures 40-45 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 161 452 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988775 281990 0.972598 0.9916 0.793647 24223 1 76 0.00219097 298 0 9.23526e+07 0.0271841 497096 9.31349e+07 1.2702e+07 24252 4.59468e+07 0 0.178952 0.9916 0.78698 9.23526e+07 0.00330057 2.01536e+07 9.58951e+06 2.03606e+07 273 2.03809e+07 1.46802e+07 0.00274419 2.03753e+07 49.9931 0.00533737 0.994425 0 50.2555 GTEX-11DXX-2526-SM-5H119 1 B1 4 pieces, minimal attached adipose tissue 5.8 Nerve Nerve - Tibial 0001323 163 450 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98542 218040 0.977996 0.988229 0.849786 22235 1 76 0.002003 180 0 7.65656e+07 0.0217223 311276 7.74776e+07 9.80762e+06 22252 3.8064e+07 0 0.128209 0.988229 0.839783 7.65656e+07 0.00336306 1.6855e+07 7.99751e+06 1.70121e+07 188 1.69854e+07 1.53982e+07 0.0026811 1.70999e+07 50.1681 0.00401762 0.991037 0 50.2319 GTEX-11DXX-2626-SM-5Q5A3 1 B1 2 pieces, focal medial calcification, atherosclerosis with narrowing of the lumen by 50-75% 7.2 Blood Vessel Artery - Tibial 0007610 165 448 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991043 154037 0.977923 0.992995 0.86563 20636 1 76 0.00169037 169 0 7.73935e+07 0.0217045 293138 7.79395e+07 5.32155e+06 20641 3.85212e+07 0 0.112293 0.992995 0.859566 7.73935e+07 0.00270921 1.67213e+07 5.39524e+06 1.68242e+07 198 1.67784e+07 1.5798e+07 0.00219879 1.6911e+07 50.1967 0.0037611 0.994946 0 50.1533 GTEX-11DXX-2726-SM-5PNXO 1 B1 2 pieces, portion of tendon, up to 10% fat 8.7 Muscle Muscle - Skeletal 0011907 166 447 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992876 234549 0.980256 0.993472 0.881867 20185 1 76 0.00293294 283 0 1.0367e+08 0.0195089 1.38697e+06 1.04351e+08 2.9485e+06 20198 5.16715e+07 0 0.0983886 0.993472 0.87611 1.0367e+08 0.00336199 2.26252e+07 1.30064e+07 2.28307e+07 307 2.27091e+07 2.13464e+07 0.00314733 2.28028e+07 50.103 0.0132914 0.994069 0 50.226 GTEX-11DXY-0004-SM-58Q7Z B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXY-0004-SM-5DWST B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXY-0004-SM-6WBTO B1 Blood Whole Blood 0013756 867 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 10/12/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DXY-0006-SM-5NQ8N B1 8.4 Blood Whole Blood 0013756 867 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.975357 436042 0.975278 0.977483 0.776251 18671 1 76 0.00231404 102 0 7.41717e+07 0.0240066 270165 7.58803e+07 6.26112e+06 18683 3.69026e+07 0 0.199027 0.977483 0.758773 7.41717e+07 0.00351205 1.70489e+07 9.38212e+07 1.73993e+07 125 1.7419e+07 1.75688e+07 0.00291174 1.72061e+07 49.6925 0.00356041 0.979609 0 50.5086 GTEX-11DXY-0008-SM-5QGR4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 963 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994451 539749 0.977191 0.995458 0.876833 19842 1 76 0.0015257 217 0 8.88998e+07 0.0224751 349212 8.93055e+07 6.25618e+06 19856 4.4324e+07 0 0.100358 0.995458 0.87285 8.88998e+07 0.00221621 1.9964e+07 1.44661e+07 2.0039e+07 232 2.00195e+07 2.34787e+07 0.00187061 2.00862e+07 50.0832 0.00391031 0.996464 0 50.0938 GTEX-11DXY-0011-R10b-SM-DO12C B1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987804 681399 0.964889 0.992015 0.852101 24472 1 76 0.00214778 272 0 1.04821e+08 0.0345239 3.50964e+06 1.05665e+08 1.00638e+07 24492 5.20519e+07 0 0.112789 0.992015 0.845296 1.04821e+08 0.00429423 2.29076e+07 1.61116e+07 2.31338e+07 311 2.32943e+07 1.52677e+07 0.00321645 2.31343e+07 49.8277 0.0332149 0.996226 0 50.2456 GTEX-11DXY-0011-R11a-SM-DNZZN B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987408 814041 0.950984 0.991049 0.751792 25182 1 76 0.00256017 274 0 1.21123e+08 0.0484735 1.6029e+06 1.22217e+08 1.21159e+07 25229 6.01432e+07 0 0.199192 0.991049 0.745062 1.21123e+08 0.00431459 2.62109e+07 1.61225e+07 2.63153e+07 303 2.65527e+07 1.77566e+07 0.00343415 2.63709e+07 49.8282 0.0131152 0.99469 0 50.0994 GTEX-11DXY-0011-R5b-SM-DNZZL B1, A1 5.6 Brain Brain - Caudate (basal ganglia) 0001873 869 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988404 709092 0.959784 0.992233 0.826355 25101 1 76 0.00222451 271 0 1.02748e+08 0.0398065 4.61517e+06 1.03552e+08 9.97556e+06 25129 5.10486e+07 0 0.133429 0.992233 0.819937 1.02748e+08 0.00426543 2.23721e+07 1.98015e+07 2.2619e+07 307 2.2749e+07 1.33972e+07 0.00324103 2.25951e+07 49.8303 0.0445687 0.996063 0 50.2743 GTEX-11DXY-0011-R6a-SM-DNZZF B1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 869 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987425 1.18417e+06 0.953189 0.991526 0.822567 25847 1 76 0.00228669 274 0 1.2602e+08 0.0463554 5.87998e+06 1.27097e+08 1.27013e+07 25882 6.25867e+07 0 0.130623 0.991526 0.815596 1.2602e+08 0.00432262 2.71969e+07 3.12853e+07 2.75438e+07 329 2.77317e+07 1.66919e+07 0.00330045 2.74819e+07 49.7738 0.0462637 0.995627 0 50.3168 GTEX-11DXY-0011-R7a-SM-DO11L B1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987971 645447 0.962614 0.991721 0.834388 24587 1 76 0.00216799 271 0 1.07022e+08 0.0370695 6.85902e+06 1.07915e+08 9.89274e+06 24612 5.31819e+07 0 0.128226 0.991721 0.82748 1.07022e+08 0.00418665 2.33447e+07 2.30653e+07 2.36314e+07 317 2.37305e+07 1.18949e+07 0.0031735 2.36018e+07 49.864 0.0635594 0.99547 0 50.3051 GTEX-11DXY-0011-R8a-SM-DO11M B1, A1 6.5 Brain Brain - Hypothalamus 0001898 869 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988192 722962 0.960481 0.991998 0.834162 25784 1 76 0.00221156 279 0 1.14898e+08 0.0391088 5.33852e+06 1.15825e+08 1.10818e+07 25820 5.70917e+07 0 0.126319 0.991998 0.827487 1.14898e+08 0.00428432 2.51229e+07 1.94379e+07 2.54678e+07 323 2.55369e+07 1.56372e+07 0.00324397 2.54438e+07 49.9087 0.0460912 0.995804 0 50.3409 GTEX-11DXY-0126-SM-5H11Q 1 B1 6 pieces, well trimmed, but some pieces include up to 10% internal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 880 1160 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989532 230367 0.978951 0.991876 0.7881 23486 1 76 0.00210461 211 0 8.37039e+07 0.0208015 450962 8.43895e+07 9.88524e+06 23514 4.16468e+07 0 0.190852 0.991876 0.781697 8.37039e+07 0.00345508 1.84029e+07 9.61618e+06 1.84887e+07 208 1.85166e+07 1.36568e+07 0.00277825 1.85711e+07 50.0734 0.00534382 0.994221 0 50.1163 GTEX-11DXY-0226-SM-5H123 1 B1 2 pieces, decreased spermatogenesis and some Sertoli cell-only tubules 5.8 Testis Testis 0000473 882 1158 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988084 360393 0.947642 0.991184 0.745926 29869 1 76 0.00221283 151 0 7.07095e+07 0.0521351 997504 7.13384e+07 8.09662e+06 29917 3.51378e+07 0 0.201716 0.991184 0.73935 7.07095e+07 0.00374081 1.52615e+07 8.07014e+06 1.52813e+07 168 1.5325e+07 9.603e+06 0.00297443 1.54279e+07 50.1673 0.0139827 0.994284 0 50.0324 GTEX-11DXY-0326-SM-5H12F 1 B1 2 pieces, ~50% fibrous and vascular tissue with chronic inflammatory cells 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 885 1155 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987346 258347 0.969628 0.990655 0.757003 24791 1 76 0.00221795 156 0 7.29013e+07 0.0300876 334998 7.3589e+07 8.8266e+06 24818 3.62126e+07 0 0.212625 0.990655 0.749929 7.29013e+07 0.00365597 1.59908e+07 7.93207e+06 1.6107e+07 167 1.61709e+07 1.15595e+07 0.00293456 1.61638e+07 49.989 0.00455229 0.993964 0 50.181 GTEX-11DXY-0426-SM-5H12R 2 B1 2 pieces, few collections of lymphocytes 7.2 Thyroid Thyroid 0002046 888 1152 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988369 298191 0.969954 0.991459 0.747712 24731 1 76 0.00227746 149 0 7.51427e+07 0.0296466 195134 7.579e+07 1.02785e+07 24770 3.73432e+07 0 0.222242 0.991459 0.741325 7.51427e+07 0.00346719 1.65044e+07 8.32166e+06 1.66329e+07 163 1.67271e+07 1.23088e+07 0.00287048 1.66323e+07 49.8579 0.00257467 0.994549 0 50.1939 GTEX-11DXY-0526-SM-5EGGQ 1 B1 2 pieces, congestion 6.8 Liver Liver 0001114 891 1149 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.988287 235403 0.972097 0.991125 0.810941 21134 1 76 0.00219979 196 0 7.73114e+07 0.0277806 1.21309e+06 7.80036e+07 8.82006e+06 21155 3.84628e+07 0 0.161156 0.991125 0.803744 7.73114e+07 0.00410465 1.68896e+07 1.46774e+07 1.6602e+07 239 1.65834e+07 1.08059e+07 0.00314949 1.71101e+07 50.7816 0.0155517 0.993963 0 49.5707 GTEX-11DXY-0826-SM-5EGGR 1 B1 2 pieces, few box car nuclei (myocyte hypertrophy), one piece includes ~10% fat/vessels 6 Heart Heart - Left Ventricle 0006566 908 1132 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.978367 129069 0.986817 0.984565 0.845358 19049 1 76 0.00216426 265 0 7.5518e+07 0.013138 6.29278e+06 7.67019e+07 1.2794e+07 19053 3.74604e+07 0 0.141459 0.984565 0.83231 7.5518e+07 0.00574981 1.6762e+07 3.84739e+07 1.64095e+07 305 1.6314e+07 3.80356e+06 0.00394575 1.71948e+07 51.3143 0.082042 0.990762 0 49.4686 GTEX-11DXY-1026-SM-5987V 1 B1 2 pieces, one is predominantly fat and fibrous tissue with only ~10% cardiac muscle, second is ~30% fibrous 6.6 Heart Heart - Atrial Appendage 0006631 906 1134 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985765 209776 0.981654 0.990836 0.834141 21240 1 76 0.00250858 150 0 6.5788e+07 0.0181853 3.212e+06 6.63965e+07 1.44821e+07 21251 3.26556e+07 0 0.147513 0.990836 0.826496 6.5788e+07 0.00638365 1.45599e+07 1.45662e+07 1.41259e+07 187 1.41632e+07 6.64607e+06 0.0044362 1.47698e+07 51.0482 0.048376 0.995906 0 49.2434 GTEX-11DXY-1126-SM-5987W 1 B1 2 pieces, significant calcific atherosclerosis (? orientation), smaller piece with atherosclerosis and narrowing of the lumen by >50% and partial rim of fat 6.5 Blood Vessel Artery - Coronary 0001621 908 1132 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.97925 272258 0.965579 0.984681 0.802374 23302 1 76 0.00271775 156 0 7.6123e+07 0.0341239 403049 7.73073e+07 1.79711e+07 23329 3.77148e+07 0 0.163205 0.984681 0.790083 7.6123e+07 0.00652604 1.61269e+07 1.10525e+07 1.62815e+07 169 1.6321e+07 1.33007e+07 0.00461139 1.64833e+07 50.2474 0.0052136 0.990113 0 50.2384 GTEX-11DXY-1326-SM-5987Z 0 B1 4 pieces, well trimmed 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 915 1125 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985306 219339 0.969589 0.989733 0.797867 22689 1 76 0.00261872 132 0 6.533e+07 0.0302075 1.22767e+06 6.60077e+07 1.33794e+07 22707 3.24362e+07 0 0.171722 0.989733 0.789675 6.533e+07 0.00624629 1.43524e+07 7.30916e+06 1.42624e+07 158 1.43006e+07 8.58682e+06 0.0044244 1.45804e+07 50.4844 0.0185989 0.99416 0 49.8427 GTEX-11DXY-1426-SM-5N9CN 0 B1 4 pieces, congested 9.1 Esophagus Esophagus - Mucosa 0006920 920 1120 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992563 223922 0.978841 0.993072 0.737933 21594 1 76 0.00308587 139 0 7.05609e+07 0.0207602 627741 7.10531e+07 3.2602e+06 21618 3.51244e+07 0 0.240908 0.993072 0.732821 7.05609e+07 0.00340245 1.60571e+07 1.03466e+07 1.61159e+07 146 1.60934e+07 1.22415e+07 0.00324408 1.6119e+07 50.0398 0.00883481 0.99358 0 50.0913 GTEX-11DXY-1526-SM-5H129 1 B1 6 pieces, well trimmed 6.7 Esophagus Esophagus - Muscularis 0004648 921 1119 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986837 184939 0.972587 0.990491 0.801389 22438 1 76 0.00213385 143 0 6.39524e+07 0.027156 510760 6.45664e+07 8.59904e+06 22461 3.17652e+07 0 0.171198 0.990491 0.793769 6.39524e+07 0.00365569 1.3693e+07 5.63258e+06 1.37902e+07 155 1.38074e+07 1.03817e+07 0.00289196 1.39002e+07 50.1675 0.00791062 0.994145 0 50.1768 GTEX-11DXY-1626-SM-5H12L 1 B1 2 pieces, both with ~30% fat and fibrous tissue 6.2 Adrenal Gland Adrenal Gland 0002369 922 1118 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989198 283608 0.968449 0.991823 0.781527 23160 1 76 0.00210821 154 0 6.82747e+07 0.03135 1.60576e+06 6.88377e+07 8.4822e+06 23189 3.39342e+07 0 0.186921 0.991823 0.775137 6.82747e+07 0.00341173 1.49416e+07 7.96879e+06 1.49698e+07 181 1.4984e+07 8.42756e+06 0.00275825 1.51038e+07 50.1991 0.0233268 0.994447 0 50.0472 GTEX-11DXY-2026-SM-5N9CZ 1 B1 6 pieces, muscularis, attached fat and vessels 5.8 Colon Colon - Sigmoid 0001159 939 1101 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989924 211673 0.966864 0.990676 0.799596 23583 1 76 0.00282925 266 0 8.57771e+07 0.0329602 1.41476e+06 8.65844e+07 4.38305e+06 23611 4.26884e+07 0 0.167268 0.990676 0.792141 8.57771e+07 0.00347559 1.8503e+07 8.58204e+06 1.86336e+07 256 1.85128e+07 1.07639e+07 0.00315218 1.86894e+07 50.2373 0.0163397 0.991429 0 50.1758 GTEX-11DXY-2326-SM-5GICW 1 B1 2 pieces, 30 and 50% fibrous tissue, no appreciable ducts/lobules 7 Breast Breast - Mammary Tissue 0008367 948 1092 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987213 217604 0.975936 0.990457 0.820192 22565 1 76 0.0026125 163 0 7.17134e+07 0.0237832 720510 7.24044e+07 9.17000e+06 22590 3.56368e+07 0 0.155744 0.990457 0.812365 7.17134e+07 0.00371041 1.57621e+07 9.09178e+06 1.58565e+07 185 1.5847e+07 1.11881e+07 0.00315966 1.59934e+07 50.2298 0.00995119 0.993701 0 50.1493 GTEX-11DXY-2626-SM-5GIE7 1 B1 4 pieces, well trimmed, minimal fat, squamous epithelium measures 23 to 36 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 963 1077 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.987445 263143 0.968617 0.990772 0.733182 24355 1 76 0.00281956 157 0 7.30705e+07 0.0311837 303474 7.37511e+07 8.82983e+06 24398 3.62947e+07 0 0.235435 0.990772 0.726416 7.30705e+07 0.00386461 1.58957e+07 8.14642e+06 1.59434e+07 158 1.59967e+07 1.08739e+07 0.00334033 1.60772e+07 50.1255 0.00411484 0.994098 0 50.0748 GTEX-11DXY-2726-SM-5GID2 1 B1 2 pieces 7.1 Muscle Muscle - Skeletal 0011907 964 1076 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990502 214848 0.980114 0.993455 0.860804 19561 1 76 0.00239715 109 0 5.78052e+07 0.0196595 736351 5.8186e+07 7.24204e+06 19570 2.87581e+07 0 0.11931 0.993455 0.85517 5.78052e+07 0.00326472 1.23963e+07 7.14745e+06 1.23579e+07 132 1.23735e+07 1.17479e+07 0.00282965 1.25352e+07 50.3247 0.0126551 0.996408 0 49.9224 GTEX-11DXY-3026-SM-5N9CB 1 B1 2 pieces, adenohypophysis and neurohypophysis 7.5 Pituitary Pituitary 0000007 1019 1021 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991855 444369 0.952206 0.99303 0.763336 26443 1 76 0.00286828 274 0 1.05175e+08 0.0475541 371031 1.05913e+08 5.29951e+06 26490 5.23783e+07 0 0.18887 0.99303 0.758016 1.05175e+08 0.00343865 2.1836e+07 2.1587e+07 2.20487e+07 297 2.20346e+07 1.64199e+07 0.00315313 2.19711e+07 49.9279 0.00350315 0.994206 0 50.2424 GTEX-11DXY-3126-SM-5N9BT 1 B1 2 pieces 7.3 Brain Brain - Cerebellum 0002037 1016 1024 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990966 396684 0.941144 0.991978 0.707643 24693 1 76 0.0030001 200 0 9.02563e+07 0.05854 1.3528e+06 9.09862e+07 4.38125e+06 24726 4.4938e+07 0 0.233501 0.991978 0.701967 9.02563e+07 0.00346643 1.93904e+07 2.0451e+07 1.95644e+07 242 1.95248e+07 1.08409e+07 0.00323303 1.95161e+07 49.9889 0.0148682 0.992991 0 50.2234 GTEX-11DXY-3226-SM-5GIDE 1 B1 2 pieces 7.7 Brain Brain - Cortex 0001870 1016 1024 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990251 207517 0.968428 0.992564 0.843662 23381 1 76 0.00258326 198 0 6.70521e+07 0.031156 1.79796e+06 6.75544e+07 8.76329e+06 23393 3.3372e+07 0 0.124767 0.992564 0.837389 6.70521e+07 0.00316862 1.48189e+07 8.63114e+06 1.48719e+07 214 1.49002e+07 8.74953e+06 0.00287526 1.49338e+07 50.0563 0.0266149 0.994878 0 50.0892 GTEX-11DXZ-0003-SM-58Q7X B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DXZ-0003-SM-5DWSR B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DXZ-0003-SM-6WBTM B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DXZ-0003-SM-CLTG6 B1 Blood Whole Blood 0013756 -43 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11DXZ-0006-SM-5LZZH B1 9.2 Blood Whole Blood 0013756 -43 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989299 505362 0.969788 0.990135 0.804221 19887 1 76 0.00345751 117 0 8.20854e+07 0.0296604 137092 8.29032e+07 4.36876e+06 19899 4.0859e+07 0 0.165567 0.990135 0.796287 8.20854e+07 0.00382487 1.87546e+07 6.91052e+07 1.89827e+07 141 1.90252e+07 2.00139e+07 0.00364103 1.87902e+07 49.6893 0.00165364 0.990971 0 50.3023 GTEX-11DXZ-0126-SM-5EGGY 1 B1 2 pieces, foci of hepatocyte necrosis and ballooning degeneration 7.9 Liver Liver 0001114 250 951 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984785 242930 0.976938 0.989625 0.836217 20450 1 76 0.00298336 104 0 6.08435e+07 0.022842 351636 6.14813e+07 9.35411e+06 20466 3.02073e+07 0 0.140721 0.989625 0.827542 6.08435e+07 0.00614663 1.31305e+07 1.14466e+07 1.30195e+07 124 1.30612e+07 1.21352e+07 0.00455726 1.33579e+07 50.5616 0.0057194 0.994465 0 49.7876 GTEX-11DXZ-0226-SM-5EGGZ 0 B1 2 pieces, one piece is fat, one is adrenal 8.4 Adrenal Gland Adrenal Gland 0002369 251 950 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983883 180347 0.976946 0.989588 0.814071 22573 1 76 0.00320758 126 0 6.69856e+07 0.0227558 965163 6.76904e+07 1.10691e+07 22586 3.32281e+07 0 0.162875 0.989588 0.805595 6.69856e+07 0.00670384 1.46467e+07 9.16436e+06 1.45696e+07 145 1.46611e+07 1.01892e+07 0.00494563 1.48995e+07 50.4032 0.0142585 0.995293 0 49.868 GTEX-11DXZ-0326-SM-5EGH1 0 B1 2 pieces, larger piece includes up to ~10% fat 8.3 Heart Heart - Atrial Appendage 0006631 268 933 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987013 159699 0.979236 0.991485 0.820339 21123 1 76 0.00340767 98 0 5.35527e+07 0.0204961 838757 5.40126e+07 7.67504e+06 21139 2.65980e+07 0 0.158896 0.991485 0.813354 5.35527e+07 0.00641388 1.12526e+07 1.03768e+07 1.11534e+07 118 1.10817e+07 8.01764e+06 0.00490399 1.15354e+07 51.0029 0.0155289 0.995958 0 49.7787 GTEX-11DXZ-0426-SM-5987Y 1 B1 6 pieces, some intimal thickening 6.1 Blood Vessel Artery - Aorta 0001496 270 931 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985879 275459 0.976707 0.98982 0.837932 22408 1 76 0.00286623 170 0 7.9402e+07 0.0228848 193455 8.02186e+07 1.62774e+07 22424 3.94475e+07 0 0.138775 0.98982 0.829402 7.9402e+07 0.00633764 1.69994e+07 7.29963e+06 1.71254e+07 172 1.71967e+07 1.55122e+07 0.00459502 1.72194e+07 50.033 0.0024116 0.99376 0 50.1846 GTEX-11DXZ-0526-SM-5GU7J 1 B1 2 pieces, atheromatous plaque with foamy macrophages and cholesterol clefts, one piece has partial rim of fat (30%) 6.4 Blood Vessel Artery - Coronary 0001621 276 925 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991324 278136 0.975533 0.993314 0.810145 22692 1 76 0.00213797 137 0 6.71614e+07 0.0240864 176372 6.76134e+07 3.99461e+06 22713 3.34042e+07 0 0.165388 0.993314 0.804728 6.71614e+07 0.00300892 1.45001e+07 4.90556e+06 1.45842e+07 153 1.45362e+07 1.26357e+07 0.00257257 1.46773e+07 50.2416 0.00260853 0.995304 0 50.1447 GTEX-11DXZ-0626-SM-5GU77 0 B1 2 pieces 6.3 Heart Heart - Left Ventricle 0006566 279 922 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990954 206181 0.981492 0.9938 0.846313 20814 1 76 0.00269666 124 0 6.55389e+07 0.01825 812554 6.59478e+07 4.6627e+06 20830 3.26088e+07 0 0.135179 0.9938 0.841066 6.55389e+07 0.00349582 1.43573e+07 7.41021e+06 1.43881e+07 144 1.43808e+07 1.22294e+07 0.00309509 1.45451e+07 50.2839 0.0123212 0.996646 0 50.0536 GTEX-11DXZ-0726-SM-5N9C4 0 B1 2 pieces, numerous hemosiderin-laden macrophages and interstitial pneumonitis with pneumocyte hyperplasia and fibroblast proliferation 7.8 Lung Lung 0008952 283 918 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992841 197279 0.973058 0.993703 0.757763 24514 1 76 0.00316891 138 0 7.46549e+07 0.0267156 244239 7.5128e+07 3.66443e+06 24551 3.71926e+07 0 0.215295 0.993703 0.752991 7.46549e+07 0.00368424 1.65925e+07 6.67262e+06 1.66685e+07 154 1.66374e+07 1.24375e+07 0.00342636 1.66872e+07 50.0747 0.00325097 0.994564 0 50.1143 GTEX-11DXZ-0926-SM-5N9CG 0 B1 2 pieces, slight nodularity/fibrosis, smaller piece is ~30% fat and vessels 7 Thyroid Thyroid 0002046 288 913 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992243 157439 0.960148 0.99305 0.719881 24076 1 76 0.00324254 115 0 6.18575e+07 0.0394509 149616 6.22904e+07 2.89070e+06 24113 3.08064e+07 0 0.240267 0.99305 0.714877 6.18575e+07 0.00365337 1.34288e+07 5.84129e+06 1.34645e+07 122 1.3449e+07 9.43297e+06 0.00344779 1.34924e+07 50.0805 0.00240191 0.993857 0 50.0665 GTEX-11DXZ-1026-SM-5N9D5 0 B1 5 pieces, well trimmed 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 293 908 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992585 162615 0.974354 0.993709 0.827325 22612 1 76 0.00309236 169 0 7.71963e+07 0.0253399 402422 7.7685e+07 3.86006e+06 22630 3.84573e+07 0 0.147029 0.993709 0.822121 7.71963e+07 0.00357699 1.65394e+07 6.48814e+06 1.66324e+07 173 1.65734e+07 1.43547e+07 0.0033344 1.66823e+07 50.1637 0.00518018 0.994833 0 50.1402 GTEX-11DXZ-1226-SM-5H11L 0 B1 7 pieces, includes few submucosal glands with oncocytic change 8.2 Esophagus Esophagus - Mucosa 0006920 297 904 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990405 263127 0.976127 0.992444 0.810319 22618 1 76 0.00253542 176 0 8.15744e+07 0.0231213 250202 8.21955e+07 1.10044e+07 22638 4.05995e+07 0 0.165808 0.992444 0.804196 8.15744e+07 0.00348382 1.82955e+07 1.34302e+07 1.84108e+07 183 1.84407e+07 1.62181e+07 0.00300864 1.84289e+07 49.984 0.00304399 0.994483 0 50.1571 GTEX-11DXZ-1326-SM-5H11X 1 B1 7 pieces, mucosa and submucosa only, several pieces with good lymphoid component 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 302 899 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988932 227442 0.968037 0.991057 0.75791 24365 1 76 0.0032836 151 0 7.37973e+07 0.0312041 620525 7.44632e+07 8.84431e+06 24402 3.67112e+07 0 0.210127 0.991057 0.751132 7.37973e+07 0.00437058 1.62128e+07 1.14525e+07 1.62413e+07 163 1.62457e+07 9.5688e+06 0.00382593 1.63596e+07 50.1747 0.00833331 0.993182 0 50.044 GTEX-11DXZ-1426-SM-5H12A 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 305 896 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989935 221842 0.97683 0.992682 0.812547 23577 1 76 0.00315358 207 0 8.47516e+07 0.0229302 1.08868e+06 8.53764e+07 1.07774e+07 23603 4.21737e+07 0 0.164282 0.992682 0.806601 8.47516e+07 0.00414373 1.83947e+07 1.23676e+07 1.85528e+07 230 1.85866e+07 1.16071e+07 0.00364728 1.85745e+07 49.9837 0.0127516 0.995429 0 50.214 GTEX-11DXZ-1626-SM-5GIDI 1 B1 6 pieces, well trimmed 6.5 Colon Colon - Sigmoid 0001159 306 895 BP-44261 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.991253 259396 0.973811 0.993338 0.818967 23115 1 76 0.00302814 281 0 9.32393e+07 0.0259264 542186 9.38646e+07 1.11377e+07 23142 4.64177e+07 0 0.154844 0.993338 0.813511 9.32393e+07 0.00368264 1.99614e+07 9.3597e+06 2.00742e+07 258 2.00251e+07 1.61758e+07 0.0033547 2.01966e+07 50.2132 0.00577626 0.995424 0 50.1409 GTEX-11DXZ-1726-SM-5H12M 1 B1 6 pieces, all include mucosa and muscularis 6.8 Colon Colon - Transverse 0001157 307 894 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990216 199900 0.973697 0.992658 0.78467 23624 1 76 0.00337387 216 0 8.36641e+07 0.0256472 1.39808e+06 8.42829e+07 1.05799e+07 23650 4.16271e+07 0 0.189027 0.992658 0.778909 8.36641e+07 0.00434781 1.84322e+07 1.43198e+07 1.8391e+07 220 1.84551e+07 1.03313e+07 0.00385964 1.85696e+07 50.1546 0.0165879 0.9951 0 49.944 GTEX-11DXZ-1826-SM-5H12Y 0 B1 2 pieces 7.5 Prostate Prostate 0002367 316 885 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991722 214267 0.97385 0.993829 0.818503 22384 1 76 0.00231385 139 0 7.3752e+07 0.025849 275544 7.421e+07 9.51815e+06 22405 3.67166e+07 0 0.155347 0.993829 0.813453 7.3752e+07 0.00331397 1.57229e+07 5.9388e+06 1.58954e+07 162 1.58995e+07 1.40544e+07 0.00281285 1.58664e+07 49.9479 0.00371303 0.995936 0 50.2728 GTEX-11DXZ-1926-SM-5GZZL 0 B1 4 pieces, predominantly fat with ~10-20% fibrous stroma, no ducts 7.7 Breast Breast - Mammary Tissue 0008367 318 883 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.99066 267289 0.976336 0.99302 0.807377 23474 1 76 0.00275567 212 0 8.76248e+07 0.0234027 693792 8.82407e+07 1.04211e+07 23502 4.36128e+07 0 0.168959 0.99302 0.801741 8.76248e+07 0.00381874 1.92249e+07 1.00536e+07 1.92391e+07 232 1.9278e+07 1.38811e+07 0.00328594 1.93874e+07 50.1415 0.00786249 0.99538 0 50.0184 GTEX-11DXZ-2026-SM-5987S 1 B1 6 pieces, well trimmed 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 320 881 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983672 421456 0.960919 0.989308 0.780252 23011 1 76 0.00330495 145 0 6.48567e+07 0.038917 520105 6.55576e+07 1.4662e+07 23034 3.21601e+07 0 0.180667 0.989308 0.771909 6.48567e+07 0.00722956 1.39845e+07 1.50591e+07 1.40332e+07 144 1.40847e+07 9.30857e+06 0.00525608 1.42805e+07 50.3453 0.00793355 0.994943 0 50.087 GTEX-11DXZ-2126-SM-59881 0 B1 2 pieces, spermatogenesis is present 8 Testis Testis 0000473 322 879 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984573 423919 0.931 0.988938 0.734868 32984 1 76 0.00307435 148 0 8.64052e+07 0.0686726 703901 8.73717e+07 2.01865e+07 33045 4.29125e+07 0 0.196133 0.988938 0.726738 8.64052e+07 0.00635227 1.79438e+07 1.32382e+07 1.78539e+07 161 1.8008e+07 1.44573e+07 0.00470607 1.81213e+07 50.1568 0.00805639 0.993303 0 49.8744 GTEX-11DXZ-2226-SM-5EGH2 1 B1 2 pieces 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 328 873 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.979888 166174 0.9745 0.985204 0.823733 24301 1 76 0.00301952 138 0 5.96927e+07 0.0252504 407376 6.05891e+07 1.01364e+07 24316 2.96136e+07 0 0.150768 0.985204 0.811545 5.96927e+07 0.00634711 1.3002e+07 7.47585e+06 1.30035e+07 134 1.30836e+07 1.02286e+07 0.00467434 1.32181e+07 50.2557 0.00672358 0.99052 0 50.0028 GTEX-11DXZ-2326-SM-5EGGV 1 B1 6 pieces, well trimmed, squamous epithelium measures 45-65 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 328 873 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984471 243588 0.977581 0.989767 0.852221 22213 1 76 0.00268962 192 0 7.07459e+07 0.0220073 219583 7.14774e+07 1.07145e+07 22228 3.50892e+07 0 0.12536 0.989767 0.843499 7.07459e+07 0.00623715 1.52604e+07 1.0072e+07 1.53614e+07 161 1.54585e+07 1.37412e+07 0.00445389 1.55167e+07 50.0939 0.00307206 0.995062 0 50.1649 GTEX-11DXZ-2426-SM-5N9DT 0 B1 2 pieces, includes 5-10% internal adipose tissue 8.7 Muscle Muscle - Skeletal 0011907 330 871 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993561 157941 0.983117 0.994394 0.866232 19245 1 76 0.00323695 132 0 7.65544e+07 0.0165902 695611 7.69859e+07 3.42949e+06 19251 3.81581e+07 0 0.116885 0.994394 0.861376 7.65544e+07 0.00362485 1.61103e+07 9.5723e+06 1.62342e+07 164 1.61168e+07 1.57415e+07 0.00343074 1.62914e+07 50.2693 0.00903556 0.995228 0 50.1916 GTEX-11DXZ-2526-SM-5N9BG 0 B1 2 pieces, includes 5-10% attached and internal fat 7.5 Nerve Nerve - Tibial 0001323 331 870 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991906 149729 0.96736 0.992754 0.759747 24461 1 76 0.00307994 170 0 8.01849e+07 0.0323496 273667 8.07702e+07 3.71736e+06 24502 3.99287e+07 0 0.207613 0.992754 0.754241 8.01849e+07 0.00356388 1.76076e+07 6.39236e+06 1.76589e+07 173 1.76014e+07 1.28617e+07 0.0033217 1.77335e+07 50.1868 0.00338822 0.993602 0 50.0726 GTEX-11DXZ-2626-SM-59882 0 B1 2 pieces, early atheromatous plaque, attachment of fibrofatty tissue/vessels 7.6 Blood Vessel Artery - Tibial 0007610 333 868 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985821 227339 0.976035 0.989972 0.825977 21728 1 76 0.00279431 141 0 7.1194e+07 0.0235563 208278 7.19152e+07 1.55002e+07 21745 3.5359e+07 0 0.150058 0.989972 0.817694 7.1194e+07 0.00619567 1.52067e+07 6.26088e+06 1.53241e+07 149 1.5399e+07 1.38361e+07 0.00448786 1.54074e+07 50.0137 0.00289616 0.994123 0 50.1923 GTEX-11DYG-0004-SM-58Q7K C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DYG-0004-SM-5DWSF C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DYG-0004-SM-6WBTB C1 Blood Whole Blood 0013756 673 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11DYG-0006-SM-5NQB2 C1 8.1 Blood Whole Blood 0013756 673 BP-39145 RNA isolation_PAXgene Blood RNA (Manual) 05/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.956094 628267 0.970143 0.958933 0.776238 18252 1 76 0.00265304 97 0 8.51202e+07 0.0280055 154362 8.87656e+07 1.20899e+07 18257 4.22819e+07 0 0.193905 0.958933 0.744359 8.51202e+07 0.00603702 1.98643e+07 1.41954e+08 1.97563e+07 131 1.97507e+07 2.18051e+07 0.00434002 2.01372e+07 50.4845 0.00173898 0.961771 0 49.8638 GTEX-11DYG-0008-SM-5QGR5 C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 782 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994058 238361 0.981942 0.995361 0.881655 19945 1 76 0.00178906 176 0 8.13324e+07 0.017685 379997 8.17114e+07 6.00332e+06 19958 4.05419e+07 0 0.100287 0.995361 0.877565 8.13324e+07 0.00257764 1.82698e+07 8.71188e+06 1.836e+07 183 1.8361e+07 2.1826e+07 0.00218283 1.83782e+07 50.0234 0.00465048 0.996664 0 50.1231 GTEX-11DYG-0011-R10b-SM-DNZZO C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 686 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988055 741580 0.962616 0.992155 0.84934 24568 1 76 0.00304218 377 0 1.13905e+08 0.0369066 5.26006e+06 1.14806e+08 1.16457e+07 24591 5.65676e+07 0 0.113276 0.992155 0.842677 1.13905e+08 0.00510722 2.44907e+07 1.97529e+07 2.49407e+07 334 2.5009e+07 1.51505e+07 0.00407043 2.48319e+07 49.8224 0.0458171 0.996256 0 50.4552 GTEX-11DYG-0011-R11a-SM-DNZZP C1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 686 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986656 932757 0.946516 0.990657 0.743348 25144 1 76 0.00289238 275 0 1.17486e+08 0.0529999 1.60358e+06 1.18594e+08 1.24577e+07 25186 5.83202e+07 0 0.203168 0.990657 0.736402 1.17486e+08 0.00497896 2.51956e+07 2.08977e+07 2.5361e+07 293 2.55703e+07 1.64511e+07 0.00393146 2.54102e+07 49.843 0.0135215 0.994658 0 50.1635 GTEX-11DYG-0011-R5a-SM-DO928 C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995517 811492 0.968218 0.996244 0.876966 22400 1 76 0.00292144 372 0 9.96491e+07 0.0314173 7.22941e+06 1.00025e+08 5.82701e+06 22412 4.9674e+07 0 0.0912519 0.996244 0.873672 9.96491e+07 0.00326638 2.14212e+07 2.35856e+07 2.18888e+07 339 2.18252e+07 1.1805e+07 0.00309379 2.15559e+07 49.6897 0.0722761 0.99697 0 50.5399 GTEX-11DYG-0011-R6a-SM-DO936 C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994992 514738 0.968134 0.995842 0.863314 22502 1 76 0.00277985 210 0 7.55395e+07 0.0315381 6.14182e+06 7.58549e+07 4.49488e+06 22521 3.76435e+07 0 0.104819 0.995842 0.859725 7.55395e+07 0.003165 1.65464e+07 1.06417e+07 1.68944e+07 214 1.67678e+07 1.05835e+07 0.00297226 1.67305e+07 49.9443 0.0809679 0.996691 0 50.5204 GTEX-11DYG-0011-R7b-SM-EXUS6 C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10976 05/20/2017 TruSeq.v1 RNASEQ 0.991706 802492 0.959758 0.992497 0.854775 23072 1 76 0.00274857 271 0 8.87652e+07 0.039929 6.21031e+06 8.94362e+07 2.07579e+06 23090 4.42295e+07 0 0.104983 0.992497 0.848362 8.87652e+07 0.00323122 1.90316e+07 2.0736e+07 1.95741e+07 312 1.94681e+07 1.02227e+07 0.0029897 1.92005e+07 49.654 0.0694385 0.993289 0 50.7026 GTEX-11DYG-0011-R8a-SM-DO93F C1, A1 6.8 Brain Brain - Hypothalamus 0001898 686 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995115 546489 0.968779 0.995925 0.866375 22638 1 76 0.00319966 374 0 9.62042e+07 0.0309821 8.95203e+06 9.65978e+07 5.53892e+06 22654 4.79619e+07 0 0.102403 0.995925 0.862845 9.62042e+07 0.00367752 2.07279e+07 2.09199e+07 2.12478e+07 332 2.09982e+07 8.91021e+06 0.0034384 2.10357e+07 50.0445 0.0926732 0.996735 0 50.6193 GTEX-11DYG-0126-SM-59883 0 C1 6 pieces; well trimmed 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 781 926 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981499 287713 0.973809 0.986777 0.826893 22453 1 76 0.00317538 172 0 7.25044e+07 0.0257807 293618 7.3476e+07 1.68861e+07 22482 3.59707e+07 0 0.146916 0.986777 0.815958 7.25044e+07 0.00685671 1.55708e+07 1.2749e+07 1.56367e+07 155 1.5768e+07 1.32988e+07 0.0050062 1.5796e+07 50.0444 0.00399611 0.992055 0 50.1056 GTEX-11DYG-0426-SM-5987J 0 C1 2 pieces 7.5 Nerve Nerve - Tibial 0001323 814 895 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983092 213931 0.966749 0.988844 0.772419 23304 1 76 0.00296431 134 0 5.60089e+07 0.0329087 209889 5.66407e+07 1.12534e+07 23332 2.77641e+07 0 0.19433 0.988844 0.763802 5.60089e+07 0.00709435 1.2184e+07 6.50218e+06 1.22806e+07 120 1.23801e+07 9.13626e+06 0.00501732 1.23868e+07 50.0136 0.00370562 0.994596 0 50.1975 GTEX-11DYG-0826-SM-5N9GH 1 C1 2 pieces; 1 with 10% internal fat 5.7 Thyroid Thyroid 0002046 850 861 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987444 315347 0.96977 0.988753 0.758747 25162 1 76 0.00420109 215 0 9.94251e+07 0.0298949 199296 1.00556e+08 5.03674e+06 25205 4.93933e+07 0 0.211022 0.988753 0.750214 9.94251e+07 0.00425903 2.18803e+07 1.14919e+07 2.18905e+07 231 2.18787e+07 1.65395e+07 0.00423003 2.20225e+07 50.1637 0.00198194 0.990063 0 50.0117 GTEX-11DYG-0926-SM-5EGGW 1 C1 2 pieces; 40 and 50% adherent fat 5.8 Blood Vessel Artery - Coronary 0001621 853 859 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.977511 166369 0.960902 0.983386 0.691437 24210 1 76 0.0029334 127 0 6.19675e+07 0.038795 385868 6.30144e+07 1.00508e+07 24246 3.06634e+07 0 0.269466 0.983386 0.679949 6.19675e+07 0.00622327 1.3284e+07 7.72106e+06 1.34325e+07 134 1.35064e+07 7.36988e+06 0.0045685 1.3555e+07 50.0898 0.00612349 0.989261 0 50.278 GTEX-11DYG-1026-SM-5A5JQ 1 C1 2 pieces; 30 and 40% fibrous and adipose content 6.2 Heart Heart - Atrial Appendage 0006631 851 862 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990377 302410 0.97387 0.993103 0.78569 22730 1 76 0.00257383 158 0 8.75168e+07 0.0258225 1.45486e+06 8.81246e+07 1.09112e+07 22755 4.35426e+07 0 0.18818 0.993103 0.780271 8.75168e+07 0.00459117 1.86651e+07 1.17094e+07 1.88763e+07 187 1.89178e+07 1.53936e+07 0.00357973 1.88463e+07 49.9053 0.0165092 0.995829 0 50.2813 GTEX-11DYG-1226-SM-5N9DC 1 C1 6 pieces; periaortic hemorrhage 6.7 Blood Vessel Artery - Aorta 0001496 858 856 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989579 181553 0.971605 0.990311 0.76194 22687 1 76 0.00310098 151 0 7.70637e+07 0.0279973 134988 7.78177e+07 3.64501e+06 22713 3.83243e+07 0 0.209666 0.990311 0.754557 7.70637e+07 0.0036692 1.6605e+07 6.53176e+06 1.66689e+07 165 1.65775e+07 1.25545e+07 0.00338488 1.67544e+07 50.2653 0.00173467 0.991043 0 50.096 GTEX-11DYG-1326-SM-5N9DO 1 C1 6 pieces; chronic esophagitis with cystic submucosal ducts [pseudodiverticulosis] 6.8 Esophagus Esophagus - Mucosa 0006920 860 854 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991225 197225 0.969079 0.992173 0.713373 24821 1 76 0.00317438 150 0 7.71407e+07 0.0306798 327616 7.77493e+07 3.90702e+06 24865 3.83959e+07 0 0.255707 0.992173 0.707789 7.71407e+07 0.00368991 1.71746e+07 8.91093e+06 1.72148e+07 156 1.71708e+07 1.14505e+07 0.0034319 1.72941e+07 50.179 0.00421375 0.993121 0 50.0584 GTEX-11DYG-1426-SM-5A5JR 1 C1 6 pieces; well trimmed muscle 5.9 Esophagus Esophagus - Muscularis 0004648 861 854 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990882 248422 0.971467 0.993347 0.798117 22708 1 76 0.00232938 134 0 7.29125e+07 0.0282817 558935 7.34008e+07 8.62161e+06 22731 3.62751e+07 0 0.17335 0.993347 0.792807 7.29125e+07 0.00427942 1.54292e+07 7.63754e+06 1.56644e+07 165 1.56519e+07 1.17711e+07 0.00330198 1.56072e+07 49.9286 0.00761483 0.995812 0 50.3782 GTEX-11DYG-1526-SM-5A5JS 0 C1 6 pieces; hair-bearing skin with up to 20% internal subcutaneous fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 863 852 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.985261 231279 0.978585 0.988038 0.849672 22913 1 76 0.00263444 148 0 7.21904e+07 0.0210638 412048 7.30644e+07 8.33603e+06 22935 3.59055e+07 0 0.128913 0.988038 0.839508 7.21904e+07 0.00471019 1.57431e+07 1.00481e+07 1.5923e+07 162 1.59503e+07 1.40485e+07 0.0036694 1.59065e+07 49.9313 0.00563952 0.990815 0 50.2841 GTEX-11DYG-1926-SM-5H12I 1 C1 6 pieces; well trimmed muscle 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 868 849 BP-43507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98724 236048 0.971249 0.990588 0.784205 24222 1 76 0.00251389 166 0 7.89334e+07 0.0285056 780323 7.96834e+07 1.09549e+07 24245 3.92147e+07 0 0.187044 0.990588 0.776824 7.89334e+07 0.00387142 1.69015e+07 7.48336e+06 1.70542e+07 187 1.7072e+07 1.17514e+07 0.00319036 1.71333e+07 50.0896 0.00979279 0.993936 0 50.2249 GTEX-11DYG-2026-SM-5EGGX 0 C1 2 pieces 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 873 845 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982527 194257 0.975475 0.987761 0.80356 23652 1 76 0.00273613 142 0 7.1351e+07 0.0241616 255626 7.2235e+07 1.07063e+07 23670 3.53845e+07 0 0.171915 0.987761 0.793725 7.1351e+07 0.00608648 1.55765e+07 8.18876e+06 1.57672e+07 156 1.58567e+07 1.25474e+07 0.00440242 1.58441e+07 49.9802 0.00353881 0.992995 0 50.3041 GTEX-11DYG-2526-SM-5N9BB 3 C1 2 pieces; glands=3; stroma=2 5.7 Prostate Prostate 0002367 886 835 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988567 210574 0.960169 0.989994 0.751382 25906 1 76 0.0034338 196 0 8.87848e+07 0.039607 1.25574e+06 8.96822e+07 4.6648e+06 25953 4.41534e+07 0 0.208787 0.989994 0.743864 8.87848e+07 0.00409093 1.93994e+07 9.51316e+06 1.9489e+07 209 1.9414e+07 1.12047e+07 0.00376189 1.96013e+07 50.24 0.0140021 0.991422 0 50.1153 GTEX-11DYG-2926-SM-5H132 1 C1 4 pieces; adherent meninges [annotated] 7 Brain Brain - Cerebellum 0002037 915 808 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989665 439797 0.940284 0.991767 0.696295 24293 1 76 0.00282716 161 0 8.17719e+07 0.0594215 1.48992e+06 8.24507e+07 9.9016e+06 24330 4.06741e+07 0 0.243989 0.991767 0.690563 8.17719e+07 0.00392878 1.74144e+07 1.79019e+07 1.76244e+07 182 1.7659e+07 8.95752e+06 0.0033768 1.75423e+07 49.8342 0.0180705 0.993869 0 50.2997 GTEX-11DYG-3126-SM-5A5L6 2 C1 1 piece; anterior and posterior [marked] 6 Pituitary Pituitary 0000007 918 806 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990488 258006 0.963361 0.992994 0.775025 24231 1 76 0.00253318 117 0 6.06068e+07 0.0363942 327587 6.10344e+07 7.26614e+06 24261 3.01536e+07 0 0.188336 0.992994 0.769595 6.06068e+07 0.0044329 1.30283e+07 8.11813e+06 1.31841e+07 138 1.32174e+07 9.31068e+06 0.00348064 1.31357e+07 49.845 0.00536725 0.9955 0 50.2972 GTEX-11DZ1-0002-SM-58Q7R C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11DZ1-0002-SM-5DWSL C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11DZ1-0002-SM-6WBTG C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11DZ1-0002-SM-CLTG7 C1 Blood Whole Blood 0013756 1041 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11DZ1-0008-SM-5QGR3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1193 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994094 274174 0.981378 0.995371 0.869033 18831 1 76 0.00156539 130 0 5.52298e+07 0.0182779 296824 5.54866e+07 3.70304e+06 18842 2.75198e+07 0 0.112345 0.995371 0.86501 5.52298e+07 0.00240646 1.24465e+07 5.82586e+06 1.24974e+07 123 1.24895e+07 1.40064e+07 0.00198539 1.25298e+07 50.0805 0.00534947 0.996649 0 50.1022 GTEX-11DZ1-0011-R10b-SM-DO943 C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994402 445880 0.965176 0.995276 0.852981 22181 1 76 0.00180957 146 0 5.59664e+07 0.0344371 4.03577e+06 5.6232e+07 3.34625e+06 22198 2.78812e+07 0 0.112195 0.995276 0.848951 5.59664e+07 0.00221909 1.22894e+07 8.34220e+06 1.25111e+07 170 1.24808e+07 6.81518e+06 0.00201415 1.23637e+07 49.7643 0.0717699 0.99615 0 50.447 GTEX-11DZ1-0011-R11b-SM-DO11W C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985964 759734 0.94676 0.990112 0.743403 24086 1 76 0.00259764 272 0 1.08421e+08 0.0528172 2.34727e+06 1.09503e+08 1.15367e+07 24126 5.38143e+07 0 0.203357 0.990112 0.736052 1.08421e+08 0.00441636 2.33483e+07 1.70124e+07 2.35291e+07 289 2.37043e+07 1.33886e+07 0.00350319 2.35721e+07 49.8602 0.0214356 0.99426 0 50.1928 GTEX-11DZ1-0011-R2a-SM-DNZZM C1, A1 6.8 Brain Brain - Substantia nigra 0002038 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988043 502943 0.962272 0.992143 0.843431 23586 1 76 0.00227748 274 0 8.77297e+07 0.0374464 5.94194e+06 8.84244e+07 9.5834e+06 23604 4.35843e+07 0 0.118841 0.992143 0.836805 8.77297e+07 0.00423457 1.91765e+07 1.55514e+07 1.96274e+07 301 1.96485e+07 1.04386e+07 0.00325198 1.94712e+07 49.7734 0.0671979 0.996243 0 50.5809 GTEX-11DZ1-0011-R3a-SM-DNZYY C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987984 639322 0.961067 0.991912 0.845865 24239 1 76 0.00211992 271 0 1.02386e+08 0.0385624 8.50729e+06 1.03221e+08 9.46879e+06 24261 5.08685e+07 0 0.115202 0.991912 0.839023 1.02386e+08 0.00425451 2.23112e+07 1.91782e+07 2.26768e+07 319 2.2728e+07 1.24387e+07 0.00318299 2.26127e+07 49.8729 0.0824184 0.995839 0 50.4063 GTEX-11DZ1-0011-R5a-SM-DO11J C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 1060 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988955 463116 0.963578 0.992728 0.840551 23789 1 76 0.00214385 270 0 9.56634e+07 0.0361982 1.13356e+07 9.63642e+07 9.37566e+06 23810 4.75519e+07 0 0.123027 0.992728 0.834439 9.56634e+07 0.0041009 2.08621e+07 2.04679e+07 2.1472e+07 313 2.14615e+07 1.0041e+07 0.00311866 2.1188e+07 49.6793 0.117632 0.996501 0 50.7203 GTEX-11DZ1-0011-R6b-SM-DNZZG C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988148 550096 0.9654 0.992104 0.856175 24455 1 76 0.00213715 272 0 1.02572e+08 0.0342266 1.03278e+07 1.03388e+08 9.93567e+06 24478 5.09635e+07 0 0.109226 0.992104 0.849414 1.02572e+08 0.00416968 2.2521e+07 1.77789e+07 2.29403e+07 316 2.30641e+07 1.40929e+07 0.00314936 2.2768e+07 49.6769 0.099894 0.99606 0 50.4612 GTEX-11DZ1-0011-R7a-SM-DNZZH C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987576 485244 0.961279 0.991867 0.850842 23427 1 76 0.00214694 269 0 8.77957e+07 0.0384887 1.06321e+07 8.85156e+07 9.16419e+06 23445 4.36146e+07 0 0.110437 0.991867 0.843922 8.77957e+07 0.00440342 1.91066e+07 1.81973e+07 1.9656e+07 309 1.96525e+07 9.37854e+06 0.0032703 1.9439e+07 49.7268 0.120116 0.996158 0 50.7086 GTEX-11DZ1-0011-R8b-SM-DNZZI C1, A1 7.1 Brain Brain - Hypothalamus 0001898 1060 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989064 481378 0.963737 0.992704 0.856871 23784 1 76 0.00211365 270 0 9.0309e+07 0.0359484 1.03345e+07 9.09728e+07 8.57722e+06 23800 4.48971e+07 0 0.106866 0.992704 0.850619 9.0309e+07 0.00396442 1.97839e+07 1.7322e+07 2.01982e+07 302 2.02616e+07 1.12332e+07 0.00303564 2.0014e+07 49.6926 0.1136 0.996343 0 50.518 GTEX-11DZ1-0011-R9a-SM-DO933 C1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1060 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994164 594168 0.964862 0.994978 0.825395 23778 1 76 0.00197229 276 0 8.33578e+07 0.0348162 5.81965e+06 8.37785e+07 5.25325e+06 23801 4.1542e+07 0 0.139468 0.994978 0.82125 8.33578e+07 0.0022399 1.84442e+07 1.14968e+07 1.88695e+07 290 1.87137e+07 1.10238e+07 0.00210598 1.86646e+07 49.9343 0.0694647 0.995792 0 50.5699 GTEX-11DZ1-0126-SM-5985Q 1 C1 6 pieces; up to 0.5mm subcutaneous fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1193 610 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986606 341140 0.976968 0.991233 0.801294 23343 1 76 0.00258701 187 0 7.64814e+07 0.022782 483555 7.71579e+07 1.53699e+07 23369 3.79708e+07 0 0.175674 0.991233 0.794269 7.64814e+07 0.00615765 1.68548e+07 9.17892e+06 1.69643e+07 173 1.70493e+07 1.31004e+07 0.004364 1.71068e+07 50.0842 0.00626708 0.995859 0 50.1619 GTEX-11DZ1-0226-SM-5A5KF 1 C1 2 pieces; 10% fibrovascular content 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1195 608 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991345 196522 0.976239 0.993535 0.817109 22793 1 76 0.00199708 211 0 7.93288e+07 0.0234416 283614 7.9845e+07 9.5431e+06 22818 3.94943e+07 0 0.15913 0.993535 0.811827 7.93288e+07 0.00372678 1.74357e+07 8.22787e+06 1.76034e+07 215 1.76152e+07 1.44456e+07 0.00286002 1.75892e+07 49.9631 0.00355206 0.995725 0 50.2393 GTEX-11DZ1-0326-SM-5N9BN 1 C1 2 pieces; fibroadipose with ducts in one; over 90% adipose in other 6.2 Breast Breast - Mammary Tissue 0008367 1208 596 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990693 215502 0.974546 0.991492 0.809675 22328 1 76 0.00276129 198 0 8.59947e+07 0.0251654 642408 8.67327e+07 4.31268e+06 22343 4.27994e+07 0 0.16487 0.991492 0.802786 8.59947e+07 0.00342291 1.88402e+07 1.02963e+07 1.89272e+07 211 1.8824e+07 1.51687e+07 0.00309184 1.90189e+07 50.2575 0.00740676 0.99229 0 50.1151 GTEX-11DZ1-0426-SM-5H11A 1 C1 2 pieces; emphysema and fibrosis; patchy bronchopneumonia 6.4 Lung Lung 0008952 1218 593 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987026 298943 0.975159 0.9906 0.794829 23527 1 76 0.0023157 147 0 6.82643e+07 0.024158 187769 6.89121e+07 8.58121e+06 23553 3.38895e+07 0 0.18033 0.9906 0.787357 6.82643e+07 0.00393492 1.50752e+07 6.19208e+06 1.51386e+07 158 1.51931e+07 1.19897e+07 0.00312239 1.52585e+07 50.1074 0.00272476 0.994173 0 50.1049 GTEX-11DZ1-0926-SM-5EQ5R 1 C1 2 pieces; 1 has 20% fat 7.6 Muscle Muscle - Skeletal 0011907 1231 624 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991124 271051 0.979174 0.993003 0.848224 19941 1 76 0.00172174 180 0 6.80549e+07 0.0205692 1.13903e+06 6.85344e+07 8.15559e+06 19956 3.38944e+07 0 0.13095 0.993003 0.84229 6.80549e+07 0.0025967 1.4821e+07 7.11061e+06 1.48542e+07 168 1.48605e+07 1.36864e+07 0.00215839 1.49317e+07 50.1194 0.0166199 0.994882 0 50.0559 GTEX-11DZ1-2026-SM-5A5KG 2 C1 6 pieces; desquamation 6.3 Esophagus Esophagus - Mucosa 0006920 1266 593 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.9886 321480 0.970576 0.991956 0.782813 24091 1 76 0.00205638 208 0 8.54043e+07 0.0292239 712035 8.60969e+07 1.08873e+07 24116 4.24635e+07 0 0.187764 0.991956 0.776515 8.54043e+07 0.00439995 1.88734e+07 1.27643e+07 1.91513e+07 209 1.91959e+07 1.44572e+07 0.0032242 1.91045e+07 49.8807 0.00827016 0.995311 0 50.3654 GTEX-11DZ1-2426-SM-5GZZX 1 C1 6 pieces 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1276 585 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.986975 328868 0.978084 0.989738 0.804532 23181 1 76 0.00205908 180 0 8.07815e+07 0.0217153 491001 8.16191e+07 9.46344e+06 23206 4.01796e+07 0 0.173552 0.989738 0.796276 8.07815e+07 0.00328025 1.79302e+07 9.1136e+06 1.807e+07 199 1.80912e+07 1.42764e+07 0.00266796 1.81301e+07 50.0537 0.00601576 0.992501 0 50.1942 GTEX-11DZ1-2726-SM-5A5KH 2 C1 2 pieces 6.6 Thyroid Thyroid 0002046 1291 571 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989759 241602 0.966263 0.992591 0.778578 23156 1 76 0.00202121 128 0 6.20193e+07 0.0334335 221621 6.24822e+07 6.92404e+06 23182 3.08439e+07 0 0.187684 0.992591 0.77281 6.20193e+07 0.00402135 1.3505e+07 7.0013e+06 1.371e+07 137 1.37448e+07 1.12163e+07 0.00301842 1.36378e+07 49.8047 0.00354695 0.995423 0 50.3767 GTEX-11DZ1-2926-SM-5A5KI 1 C1 4 pieces; meningeal congestion , possible hemorrhage 6.3 Brain Brain - Cerebellum 0002037 1314 549 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989174 346398 0.945532 0.991766 0.726017 23394 1 76 0.00227903 155 0 7.1271e+07 0.0541047 1.44793e+06 7.18627e+07 9.30553e+06 23421 3.54471e+07 0 0.219515 0.991766 0.720039 7.1271e+07 0.004114 1.53875e+07 1.32294e+07 1.55186e+07 169 1.55551e+07 8.38993e+06 0.00319412 1.55187e+07 49.9415 0.0201485 0.994358 0 50.2121 GTEX-11EI6-0004-SM-58Q7L C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EI6-0004-SM-5DWSG C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11EI6-0004-SM-6WBTC C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11EI6-0004-SM-7FG6D C1 Blood Whole Blood 0013756 873 BP-39216 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2013 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11EI6-0005-SM-5N9GN C1 8.9 Blood Whole Blood 0013756 873 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986431 910492 0.967494 0.987872 0.7288 22719 1 76 0.0043081 209 0 1.19303e+08 0.0319338 189336 1.20768e+08 5.61705e+06 22753 5.92813e+07 0 0.238694 0.987872 0.719961 1.19303e+08 0.00442869 2.68141e+07 7.2675e+07 2.70091e+07 222 2.70452e+07 2.35029e+07 0.00436831 2.69588e+07 49.92 0.00156777 0.989313 0 50.1811 GTEX-11EI6-0008-SM-5QGR7 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 970 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.995009 160994 0.982109 0.995976 0.874091 18531 1 76 0.00163375 125 0 5.6303e+07 0.0175496 304112 5.65305e+07 3.68238e+06 18539 2.80745e+07 0 0.108018 0.995976 0.870573 5.6303e+07 0.00238082 1.26734e+07 5.5709e+06 1.26983e+07 126 1.26917e+07 1.42566e+07 0.00200692 1.27377e+07 50.0904 0.00537961 0.996942 0 50.049 GTEX-11EI6-0011-R10a-SM-CYKQP C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 RIP-Seq GTEX-11EI6-0011-R10a-SM-DO93R C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995042 479717 0.969844 0.995761 0.865225 22310 1 76 0.00200946 268 0 7.36805e+07 0.0297176 5.16351e+06 7.39941e+07 4.54920e+06 22322 3.67231e+07 0 0.104619 0.995761 0.861558 7.36805e+07 0.00231876 1.60931e+07 1.39655e+07 1.64996e+07 261 1.63119e+07 8.8689e+06 0.002164 1.63258e+07 50.0214 0.0697827 0.996481 0 50.6236 GTEX-11EI6-0011-R11a-SM-DO11V C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986924 430691 0.953671 0.991203 0.787069 23368 1 76 0.00250781 268 0 9.52696e+07 0.0460675 5.16473e+06 9.61151e+07 8.8515e+06 23394 4.73081e+07 0 0.166602 0.991203 0.780146 9.52696e+07 0.00491595 2.04511e+07 1.81234e+07 2.08215e+07 310 2.08346e+07 7.62072e+06 0.00370668 2.07771e+07 49.9309 0.0537348 0.995482 0 50.4488 GTEX-11EI6-0011-R1a-SM-DO93L C1, A1 6.3 Brain Brain - Hippocampus 0001954 902 BP-42343 RNA isolation_PAXgene Tissue miRNA 08/14/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994382 472874 0.969913 0.995271 0.846409 23103 1 76 0.00216552 371 0 9.29487e+07 0.0298762 9.75578e+06 9.33903e+07 5.73074e+06 23119 4.63357e+07 0 0.123504 0.995271 0.842407 9.29487e+07 0.00252286 2.01388e+07 2.4784e+07 2.09014e+07 346 2.06985e+07 7.78782e+06 0.00234403 2.04062e+07 49.6445 0.104462 0.99616 0 50.9291 GTEX-11EI6-0011-R8a-SM-DO93M C1, A1 5.7 Brain Brain - Hypothalamus 0001898 902 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994315 334694 0.97868 0.995308 0.853567 21373 1 76 0.00212841 369 0 8.92784e+07 0.0211699 1.02771e+07 8.96992e+07 4.9882e+06 21384 4.45049e+07 0 0.125113 0.995308 0.849562 8.92784e+07 0.00273963 1.93783e+07 3.14214e+07 2.01096e+07 360 1.95756e+07 5.59661e+06 0.00243371 1.99804e+07 50.5117 0.114573 0.996301 0 50.926 GTEX-11EI6-0126-SM-5985R 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 969 1438 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986374 298027 0.970005 0.99118 0.790279 23489 1 76 0.00260657 156 0 6.24459e+07 0.0297473 280048 6.30016e+07 1.14273e+07 23516 3.09932e+07 0 0.179726 0.99118 0.783308 6.24459e+07 0.006432 1.34823e+07 7.68361e+06 1.35438e+07 138 1.36091e+07 1.06248e+07 0.00451001 1.37004e+07 50.1673 0.00444509 0.995985 0 50.1139 GTEX-11EI6-0226-SM-5EQ64 0 C1 2 pieces, ~10-15% fascia/fibrous tissue, rep. delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 971 1437 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991086 266799 0.974063 0.993386 0.800921 23409 1 76 0.00206801 167 0 7.22241e+07 0.0256025 512348 7.2705e+07 7.55396e+06 23428 3.5934e+07 0 0.173142 0.993386 0.795623 7.22241e+07 0.00302309 1.57874e+07 7.19507e+06 1.59472e+07 176 1.5935e+07 1.20445e+07 0.00254444 1.5958e+07 50.036 0.00704694 0.995685 0 50.2518 GTEX-11EI6-0326-SM-5EQ6G 0 C1 2 pieces, 10-20% interstitial fat, rep foci delineated 8.2 Muscle Muscle - Skeletal 0011907 973 1435 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992194 219215 0.981285 0.994469 0.852502 19725 1 76 0.00180963 135 0 6.70428e+07 0.0184785 891159 6.74156e+07 8.89073e+06 19732 3.33816e+07 0 0.128783 0.994469 0.847787 6.70428e+07 0.00268601 1.46367e+07 7.23682e+06 1.46466e+07 165 1.4663e+07 1.29983e+07 0.00224682 1.47598e+07 50.1645 0.0132189 0.996744 0 50.0169 GTEX-11EI6-0426-SM-5EQ43 0 C1 2 pieces, only trace fat, good specimens 7.4 Nerve Nerve - Tibial 0001323 974 1435 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989485 290413 0.967204 0.992455 0.730316 24452 1 76 0.00211617 159 0 7.71814e+07 0.0324847 199558 7.77682e+07 1.01877e+07 24492 3.8358e+07 0 0.236888 0.992455 0.724806 7.71814e+07 0.00316718 1.69237e+07 7.99879e+06 1.70624e+07 166 1.70884e+07 1.19056e+07 0.0026401 1.71167e+07 50.0413 0.00256606 0.995425 0 50.2039 GTEX-11EI6-0526-SM-5985S 0 C1 2 pieces, trace fat, good specimens 5.8 Blood Vessel Artery - Tibial 0007610 978 1437 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985766 252095 0.974553 0.990232 0.809659 20979 1 76 0.00263924 133 0 7.10027e+07 0.0251384 312352 7.17031e+07 1.57385e+07 20994 3.52519e+07 0 0.164894 0.990232 0.80175 7.10027e+07 0.00617154 1.53225e+07 7.36727e+06 1.54501e+07 149 1.55068e+07 1.31512e+07 0.00439742 1.55628e+07 50.0902 0.00435619 0.994699 0 50.2073 GTEX-11EI6-0626-SM-5985T 0 C1 2 pieces, ~5-10% fascia/fibrous tissue, rep delineated, rest adipose tissue. No ductal elements 6.5 Breast Breast - Mammary Tissue 0008367 983 1432 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98515 251669 0.972712 0.989565 0.744554 24457 1 76 0.0028132 135 0 7.08124e+07 0.0269852 336107 7.15591e+07 1.52883e+07 24494 3.51527e+07 0 0.228157 0.989565 0.736785 7.08124e+07 0.00619758 1.55977e+07 7.99909e+06 1.56788e+07 145 1.57745e+07 1.11563e+07 0.00449784 1.57978e+07 50.037 0.00469691 0.99398 0 50.1296 GTEX-11EI6-0726-SM-59866 1 C1 2 pieces, minute colloid cyst, no abnormalities 6.3 Thyroid Thyroid 0002046 986 1430 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983771 255302 0.969367 0.989097 0.803981 24154 1 76 0.00265477 141 0 6.99939e+07 0.0302951 295787 7.07655e+07 1.48179e+07 24182 3.47209e+07 0 0.165386 0.989097 0.795216 6.99939e+07 0.00647303 1.52183e+07 7.95202e+06 1.53827e+07 150 1.54976e+07 1.25809e+07 0.00455362 1.54564e+07 49.9335 0.00417982 0.994423 0 50.2685 GTEX-11EI6-0826-SM-5985V 2 C1 2 pieces, marded congestion 5.8 Lung Lung 0008952 991 1425 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979844 215472 0.973365 0.985392 0.73229 23417 1 76 0.00307507 117 0 6.3754e+07 0.0262785 579211 6.46991e+07 1.22625e+07 23444 3.16033e+07 0 0.241075 0.985392 0.721593 6.3754e+07 0.00744971 1.40781e+07 8.59150e+06 1.41999e+07 131 1.43185e+07 8.8021e+06 0.00525007 1.42973e+07 49.9631 0.00895238 0.990941 0 50.2154 GTEX-11EI6-0826-SM-CYKV8 2 C1 2 pieces, marded congestion 5.8 Lung Lung 0008952 991 1425 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 RIP-Seq GTEX-11EI6-1526-SM-5P9GL 1 C1 6 pieces, squamous mucosa is ~10% thickness, beginning to slough, autolysis score is '2' in some areas 6 Esophagus Esophagus - Mucosa 0006920 1003 1422 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987588 298736 0.97456 0.987542 0.829534 23003 1 76 0.00327688 369 0 9.86053e+07 0.0252418 2.07083e+06 9.98493e+07 4.29666e+06 23024 4.89604e+07 0 0.145026 0.987542 0.819199 9.86053e+07 0.0042101 2.20897e+07 1.2949e+07 2.25462e+07 362 2.23374e+07 1.09481e+07 0.00374351 2.22941e+07 49.9515 0.0207396 0.987495 0 50.5114 GTEX-11EI6-2226-SM-5EGJM 2 C1 2 pieces, spermatogenesis is present, markedly autolyzed 6.1 Testis Testis 0000473 1015 1415 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987012 407709 0.932038 0.990633 0.736177 33581 1 76 0.00200151 216 0 9.157e+07 0.0676239 969727 9.24359e+07 8.15094e+06 33646 4.55023e+07 0 0.195861 0.990633 0.729281 9.157e+07 0.00307068 1.90595e+07 1.27013e+07 1.92051e+07 226 1.9303e+07 1.51616e+07 0.00253414 1.92634e+07 49.9486 0.0104908 0.994254 0 50.1902 GTEX-11EI6-2426-SM-5PNVS 2 C1 6 pieces, mucosa is up to ~1mm thick, ~40-60% thickness but moderately-markedly autolyzed 5.8 Stomach Stomach 0000945 1018 1413 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988719 165323 0.972143 0.990892 0.81694 22741 1 76 0.00212966 175 0 6.73823e+07 0.0276615 2.29946e+06 6.80017e+07 5.63914e+06 22754 3.35062e+07 0 0.155203 0.990892 0.809499 6.73823e+07 0.00355714 1.48175e+07 1.15929e+07 1.50391e+07 194 1.49485e+07 8.4337e+06 0.00284184 1.50496e+07 50.1686 0.0338147 0.993065 0 50.3711 GTEX-11EI6-2626-SM-5PNVT 1 C1 6 pieces, all muscularis, good specimens 6.4 Colon Colon - Sigmoid 0001159 1024 1408 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990815 228273 0.969367 0.992823 0.803347 23113 1 76 0.00201635 191 0 8.04104e+07 0.0304055 787633 8.09917e+07 8.1235e+06 23138 4.00053e+07 0 0.16602 0.992823 0.797581 8.04104e+07 0.00308568 1.72123e+07 7.88384e+06 1.73321e+07 204 1.7255e+07 1.26939e+07 0.00254994 1.74474e+07 50.2773 0.00972486 0.994831 0 50.1733 GTEX-11EI6-2826-SM-5H11D 0 C1 6 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1028 1406 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989343 284608 0.972196 0.99175 0.767734 25167 1 76 0.00224082 185 0 8.1125e+07 0.0275211 286469 8.17999e+07 1.08639e+07 25200 4.03639e+07 0 0.204461 0.99175 0.7614 8.1125e+07 0.00313021 1.77919e+07 8.78989e+06 1.79252e+07 185 1.79763e+07 1.37667e+07 0.00268443 1.79273e+07 49.9317 0.00350207 0.994157 0 50.1865 GTEX-11EI6-2926-SM-5985U 1 C1 4 pieces, no significant abnormalities 6.2 Brain Brain - Cerebellum 0002037 1045 1389 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985074 278741 0.957109 0.990004 0.773876 23576 1 76 0.00296913 195 0 7.96137e+07 0.0426878 3.1732e+06 8.04175e+07 1.63604e+07 23591 3.95134e+07 0 0.183232 0.990004 0.766141 7.96137e+07 0.00686789 1.74117e+07 1.61001e+07 1.71944e+07 238 1.71221e+07 6.65134e+06 0.0049088 1.78194e+07 50.9978 0.0394591 0.994935 0 49.6861 GTEX-11EI6-3026-SM-5GZZO 1 C1 4 pieces, no significant abnormalities 6.4 Brain Brain - Cortex 0001870 1048 1387 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991465 431911 0.964226 0.993667 0.8256 24154 1 76 0.00229351 370 0 9.66699e+07 0.0354971 5.62951e+06 9.7286e+07 1.2201e+07 24174 4.81298e+07 0 0.138626 0.993667 0.820372 9.66699e+07 0.00335033 2.10824e+07 2.7164e+07 2.11997e+07 343 2.10245e+07 9.60145e+06 0.00282075 2.14644e+07 50.5177 0.0578656 0.995869 0 50.1388 GTEX-11EI6-3126-SM-5H111 2 C1 1 piece, all adenohypophysis, 1x0.5mm nubbin of dura, delineated 6.6 Pituitary Pituitary 0000007 1048 1387 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.987473 391357 0.963175 0.990887 0.764038 26174 1 76 0.00223099 270 0 9.15841e+07 0.0366189 1.65165e+06 9.24264e+07 1.11945e+07 26225 4.55115e+07 0 0.199137 0.990887 0.757075 9.15841e+07 0.00372302 1.99868e+07 9.84063e+06 2.0112e+07 266 2.01631e+07 1.07736e+07 0.00297443 2.02338e+07 50.0875 0.0178699 0.994302 0 50.156 GTEX-11EM3-0001-SM-5Q5BD B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1143 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990326 507003 0.962946 0.992862 0.798617 20197 1 76 0.00165773 140 0 6.27918e+07 0.036636 469453 6.32432e+07 4.3294e+06 20222 3.12415e+07 0 0.164329 0.992862 0.792917 6.27918e+07 0.00269206 1.3859e+07 1.27343e+07 1.3895e+07 133 1.39247e+07 1.43234e+07 0.00217358 1.39925e+07 50.1214 0.00742298 0.995399 0 50.0649 GTEX-11EM3-0004-SM-58Q9C B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EM3-0004-SM-5DWTY B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EM3-0004-SM-6WBUK B1 Blood Whole Blood 0013756 1143 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EM3-0005-SM-5N9DK B1 8.9 Blood Whole Blood 0013756 1143 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99133 605190 0.960772 0.992398 0.801219 18833 1 76 0.0028538 153 0 8.58966e+07 0.0388976 236567 8.65546e+07 4.45587e+06 18847 4.27988e+07 0 0.159553 0.992398 0.795127 8.58966e+07 0.0033883 1.88903e+07 5.23293e+07 1.90578e+07 173 1.90684e+07 1.82332e+07 0.00312076 1.8979e+07 49.8826 0.00273315 0.993465 0 50.2208 GTEX-11EM3-0126-SM-5985K 0 B1 2 pieces, small attachment of fibrofatty tissue 7.4 Thyroid Thyroid 0002046 102 566 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984986 298474 0.97199 0.989787 0.782946 24334 1 76 0.00249622 208 0 8.82214e+07 0.0277333 396165 8.91317e+07 2.02552e+07 24371 4.38048e+07 0 0.189044 0.989787 0.77495 8.82214e+07 0.00605777 1.9387e+07 9.57455e+06 1.94372e+07 213 1.95331e+07 1.49987e+07 0.00426835 1.96819e+07 50.1896 0.00444472 0.994589 0 50.0646 GTEX-11EM3-0226-SM-5985Y 1 B1 6 pieces, hemorrhage in adventitia 7 Blood Vessel Artery - Aorta 0001496 104 564 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984056 236482 0.974522 0.989885 0.844277 21462 1 76 0.00242809 142 0 6.87079e+07 0.0251236 356833 6.94099e+07 1.44901e+07 21474 3.40793e+07 0 0.130245 0.989885 0.835737 6.87079e+07 0.00722944 1.47907e+07 6.72818e+06 1.49113e+07 154 1.50001e+07 1.28829e+07 0.00481463 1.50726e+07 50.1205 0.00514095 0.995715 0 50.2031 GTEX-11EM3-0326-SM-5A5KJ 0 B1 2 pieces, includes 10-20% attached fat/ vessels 9.2 Adrenal Gland Adrenal Gland 0002369 107 561 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992159 285899 0.977962 0.994409 0.836808 22339 1 76 0.00175215 201 0 8.77983e+07 0.0216664 1.39032e+06 8.82919e+07 1.02249e+07 22366 4.37186e+07 0 0.141154 0.994409 0.83213 8.77983e+07 0.00362692 1.95011e+07 1.27351e+07 1.94221e+07 255 1.94526e+07 1.49662e+07 0.00268741 1.9643e+07 50.2436 0.0157469 0.99666 0 49.8986 GTEX-11EM3-0426-SM-5N9BZ 1 B1 2 pieces, one piece is 10% fat/10% fibrous 8.3 Heart Heart - Atrial Appendage 0006631 110 558 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993491 165120 0.981279 0.99442 0.84392 21570 1 76 0.00247245 198 0 7.3144e+07 0.0184833 1.76842e+06 7.35544e+07 3.61019e+06 21585 3.64573e+07 0 0.137359 0.99442 0.839212 7.3144e+07 0.00298639 1.60052e+07 1.29528e+07 1.60897e+07 209 1.59553e+07 1.14602e+07 0.00272918 1.62033e+07 50.3856 0.0240423 0.99535 0 50.1317 GTEX-11EM3-0526-SM-5H12N 1 B1 2 pieces, significant attachment of fat (up to 2mm) 7.1 Blood Vessel Artery - Coronary 0001621 138 530 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990533 205914 0.975796 0.993303 0.84666 20957 1 76 0.00186261 152 0 6.75786e+07 0.0239248 465984 6.80343e+07 8.77827e+06 20972 3.36191e+07 0 0.129137 0.993303 0.840989 6.75786e+07 0.00313542 1.44521e+07 5.03749e+06 1.46103e+07 168 1.45608e+07 1.23625e+07 0.00249724 1.46862e+07 50.2142 0.00684925 0.996073 0 50.2722 GTEX-11EM3-0626-SM-5H12Z 0 B1 2 pieces, no abnormalities 8.5 Heart Heart - Left Ventricle 0006566 142 526 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.992991 210293 0.986785 0.995046 0.884127 19997 1 76 0.00171815 269 0 8.33261e+07 0.0129215 1.41619e+06 8.3741e+07 1.07943e+07 20005 4.15094e+07 0 0.102658 0.995046 0.879747 8.33261e+07 0.00262749 1.84403e+07 1.12618e+07 1.84538e+07 268 1.83568e+07 1.61257e+07 0.00217188 1.86959e+07 50.4576 0.0169116 0.9971 0 50.0184 GTEX-11EM3-0726-SM-5GZZM 0 B1 6 pieces, well trimmed 8.7 Esophagus Esophagus - Muscularis 0004648 148 520 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991957 255700 0.980658 0.994281 0.852073 21827 1 76 0.00180778 275 0 8.38065e+07 0.0190669 704040 8.42886e+07 9.68225e+06 21845 4.17251e+07 0 0.128585 0.994281 0.8472 8.38065e+07 0.00288028 1.82456e+07 8.7431e+06 1.82834e+07 266 1.82679e+07 1.50393e+07 0.00234278 1.84452e+07 50.2414 0.00835274 0.996605 0 50.0516 GTEX-11EM3-0826-SM-5N9CC 1 B1 6 pieces, few submucosal glands (some marked) 9.6 Esophagus Esophagus - Mucosa 0006920 151 517 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991675 178645 0.977519 0.992805 0.848113 22096 1 76 0.00270574 170 0 7.83195e+07 0.0221604 298220 7.88871e+07 4.12084e+06 22112 3.90339e+07 0 0.129406 0.992805 0.842011 7.83195e+07 0.00321683 1.75994e+07 1.09413e+07 1.77001e+07 190 1.76698e+07 1.67437e+07 0.00296099 1.77139e+07 50.0623 0.00378034 0.993935 0 50.1425 GTEX-11EM3-0926-SM-5A5KK 0 B1 6 pieces, well trimmed 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 153 515 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990463 242333 0.972486 0.993059 0.810585 22571 1 76 0.00186143 209 0 7.72323e+07 0.0271809 845299 7.7772e+07 9.66214e+06 22595 3.84383e+07 0 0.161901 0.993059 0.804959 7.72323e+07 0.00363864 1.66962e+07 8.43486e+06 1.6836e+07 226 1.68095e+07 1.24104e+07 0.00274771 1.69039e+07 50.1399 0.0108689 0.995656 0 50.2085 GTEX-11EM3-1026-SM-5A5KL 1 B1 6 pieces, mucosa and submucosa 7.4 Stomach Stomach 0000945 156 512 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.984296 195368 0.977815 0.987505 0.814319 22223 1 76 0.00201192 258 0 6.56669e+07 0.0218329 680306 6.64978e+07 8.09813e+06 22245 3.26588e+07 0 0.163496 0.987505 0.804144 6.56669e+07 0.00418422 1.50226e+07 6.89813e+07 1.51107e+07 184 1.51531e+07 1.57323e+07 0.00309454 1.51858e+07 50.054 0.0102305 0.990713 0 50.1461 GTEX-11EM3-1126-SM-5A5KM 0 B1 2 pieces, fat with few larger vessels 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 507 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991225 228728 0.972994 0.99335 0.827903 23750 1 76 0.0018128 274 0 8.15683e+07 0.0267888 1.12534e+06 8.21143e+07 9.59782e+06 23773 4.06283e+07 0 0.145091 0.99335 0.822398 8.15683e+07 0.00357832 1.79833e+07 1.14084e+07 1.80541e+07 259 1.80212e+07 1.33364e+07 0.00269367 1.81755e+07 50.2131 0.0137045 0.995475 0 50.0982 GTEX-11EM3-1226-SM-5N9DD 0 B1 6 pieces, well trimmed with minimal internal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 165 503 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991473 181699 0.970364 0.992654 0.800086 23772 1 76 0.00264487 178 0 7.61477e+07 0.0294281 740457 7.67112e+07 3.76379e+06 23796 3.79232e+07 0 0.170278 0.992654 0.794208 7.61477e+07 0.00327115 1.67804e+07 8.22842e+06 1.68255e+07 183 1.67667e+07 1.285e+07 0.00295764 1.69298e+07 50.242 0.00965253 0.993835 0 50.0672 GTEX-11EM3-1326-SM-5N9C6 0 B1 2 pieces, predominantly fibrous stroma with many ducts/lobules 8 Breast Breast - Mammary Tissue 0008367 170 498 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992988 163653 0.964508 0.993718 0.786834 25033 1 76 0.0027315 175 0 7.92294e+07 0.0348905 576772 7.97303e+07 4.01968e+06 25063 3.94697e+07 0 0.177674 0.993718 0.781891 7.92294e+07 0.00308121 1.73209e+07 8.54974e+06 1.74263e+07 184 1.73606e+07 1.45712e+07 0.00290623 1.74439e+07 50.1196 0.00723404 0.994448 0 50.1516 GTEX-11EM3-1526-SM-5A5KN 1 B1 6 pieces, mucosa and muscularis 8.4 Colon Colon - Transverse 0001157 191 477 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988705 223733 0.97491 0.991495 0.817923 23347 1 76 0.00215327 218 0 7.56145e+07 0.0234821 757973 7.62631e+07 8.30489e+06 23376 3.75739e+07 0 0.156987 0.991495 0.810967 7.56145e+07 0.00382209 1.68493e+07 1.22013e+07 1.67969e+07 225 1.68321e+07 1.26554e+07 0.00298533 1.70053e+07 50.2558 0.00993892 0.994286 0 49.9222 GTEX-11EM3-1626-SM-5N9CO 1 B1 6 pieces, predominantly muscularis with small strip of mucosa, attachment of fat 8.6 Colon Colon - Sigmoid 0001159 189 479 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993563 189238 0.977015 0.994379 0.842293 22152 1 76 0.00256829 210 0 8.19179e+07 0.0226998 552870 8.2381e+07 4.0722e+06 22171 4.08181e+07 0 0.134722 0.994379 0.837558 8.19179e+07 0.00299767 1.77137e+07 7.14645e+06 1.78282e+07 225 1.77382e+07 1.51483e+07 0.0027828 1.78695e+07 50.1844 0.00671113 0.995196 0 50.1611 GTEX-11EM3-1726-SM-5N9D1 0 B1 2 pieces 8.8 Ovary Ovary 0000992 194 474 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992798 270718 0.967208 0.993632 0.786167 23389 1 76 0.00260119 150 0 7.27486e+07 0.0324725 229551 7.32148e+07 3.25089e+06 23418 3.62366e+07 0 0.181041 0.993632 0.781161 7.27486e+07 0.00305846 1.5993e+07 7.19691e+06 1.6052e+07 157 1.60202e+07 1.41646e+07 0.00282963 1.60875e+07 50.1048 0.00313531 0.994467 0 50.0921 GTEX-11EM3-1826-SM-5A5KO 0 B1 6 pieces 7.8 Vagina Vagina 0000996 201 467 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990081 231291 0.968529 0.992726 0.787338 23495 1 76 0.0019335 176 0 7.50101e+07 0.0311782 366611 7.55598e+07 9.49337e+06 23516 3.73199e+07 0 0.181191 0.992726 0.78161 7.50101e+07 0.00365236 1.62788e+07 7.03115e+06 1.64508e+07 177 1.64635e+07 1.27244e+07 0.00279064 1.64502e+07 49.9797 0.00485193 0.99537 0 50.2626 GTEX-11EM3-1926-SM-5987U 0 B1 2 pieces, one piece is essentially all myometrium, second is 20% endometrium/80% myometrium 8.2 Uterus Uterus 0000995 203 465 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987265 303694 0.973163 0.991667 0.819311 22736 1 76 0.00247422 147 0 6.73128e+07 0.0264725 247941 6.78784e+07 1.42361e+07 22761 3.34301e+07 0 0.153851 0.991667 0.812484 6.73128e+07 0.00584926 1.46205e+07 6.2589e+06 1.46754e+07 148 1.47579e+07 1.2482e+07 0.00415425 1.48121e+07 50.0917 0.00365272 0.996069 0 50.0937 GTEX-11EM3-2126-SM-5H11M 0 B1 2 pieces, one piece is fragmented, ~10-20% fat and portion of tendon 7.9 Muscle Muscle - Skeletal 0011907 233 435 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991841 228651 0.985051 0.993856 0.878323 19974 1 76 0.00176744 276 0 8.56629e+07 0.0147393 956299 8.61925e+07 1.14602e+07 19984 4.26775e+07 0 0.106727 0.993856 0.872927 8.56629e+07 0.00262808 1.88929e+07 1.50925e+07 1.87166e+07 272 1.8675e+07 1.63522e+07 0.00219689 1.91008e+07 50.5636 0.0110949 0.995871 0 49.7657 GTEX-11EM3-2226-SM-5H11Y 1 B1 2 pieces, well trimmed 6.4 Blood Vessel Artery - Tibial 0007610 237 431 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.98865 299502 0.973973 0.9915 0.855599 20508 1 76 0.00190607 164 0 7.15822e+07 0.0256819 602949 7.21958e+07 9.42465e+06 20520 3.55913e+07 0 0.118374 0.9915 0.848326 7.15822e+07 0.00322279 1.51749e+07 5.86334e+06 1.52955e+07 185 1.52588e+07 1.307e+07 0.00256254 1.54104e+07 50.2471 0.00835158 0.99435 0 50.198 GTEX-11EM3-2326-SM-5H12B 1 B1 2 pieces, one is ~10% fibrous with few sweat glands 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 238 430 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.990407 203045 0.977895 0.993221 0.825132 21918 1 76 0.00192522 167 0 7.34386e+07 0.021847 392313 7.39398e+07 9.07296e+06 21934 3.65468e+07 0 0.152763 0.993221 0.819538 7.34386e+07 0.00310288 1.61676e+07 7.89062e+06 1.62501e+07 194 1.62755e+07 1.23006e+07 0.00251238 1.63359e+07 50.0926 0.00530584 0.996034 0 50.1273 GTEX-11EM3-2426-SM-59861 1 B1 6 pieces, well trimmed with minimal internal adipose tissue, squamous epithelium measures 40-70 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 240 428 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987223 270972 0.97232 0.991159 0.812677 23212 1 76 0.00250553 178 0 6.599e+07 0.0274523 554129 6.65786e+07 1.31051e+07 23234 3.27963e+07 0 0.159643 0.991159 0.805492 6.599e+07 0.0058988 1.44502e+07 8.9001e+06 1.44783e+07 154 1.4517e+07 1.13738e+07 0.00419543 1.46561e+07 50.2384 0.00832292 0.995094 0 50.0485 GTEX-11EMC-0002-SM-5Q5DO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 635 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988229 842102 0.961526 0.990858 0.809799 21528 1 76 0.00275933 214 0 9.83279e+07 0.033377 345182 9.92351e+07 1.54291e+07 21559 4.86959e+07 0 0.151728 0.990858 0.802395 9.83279e+07 0.00395771 2.17762e+07 2.69867e+07 2.18366e+07 238 2.19007e+07 2.2586e+07 0.00335693 2.19708e+07 50.0799 0.00347843 0.993487 0 50.0692 GTEX-11EMC-0004-SM-58Q8T B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EMC-0004-SM-5DWTM B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EMC-0004-SM-6WBUA B1 Blood Whole Blood 0013756 635 BP-39281 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/23/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EMC-0006-SM-5O9DN B1 7 Blood Whole Blood 0013756 635 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.96542 679552 0.980434 0.967966 0.811893 18217 1 76 0.00402171 194 0 1.2536e+08 0.0185297 321802 1.29509e+08 5.50452e+06 18224 6.2326e+07 0 0.168541 0.967966 0.785885 1.2536e+08 0.00528838 2.92139e+07 2.00891e+08 2.99239e+07 219 2.99946e+07 3.45978e+07 0.00465338 2.94859e+07 49.5724 0.00248479 0.970513 0 50.6002 GTEX-11EMC-0008-SM-5Q5DR B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 809 BP-39935 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.992961 426387 0.975392 0.994803 0.852316 20655 1 76 0.00179013 179 0 8.2156e+07 0.0242675 252459 8.25852e+07 1.09148e+07 20675 4.09284e+07 0 0.123075 0.994803 0.847887 8.2156e+07 0.00289242 1.83123e+07 1.46065e+07 1.84017e+07 185 1.84071e+07 2.11905e+07 0.00234026 1.84619e+07 50.0743 0.00305695 0.996644 0 50.1218 GTEX-11EMC-0011-R10a-SM-DNZZJ B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988461 578151 0.962044 0.992238 0.848554 23801 1 76 0.00220825 270 0 9.06059e+07 0.0376106 4.81737e+06 9.13146e+07 9.29367e+06 23821 4.50223e+07 0 0.11349 0.992238 0.841968 9.06059e+07 0.004038 1.96992e+07 1.62746e+07 2.00496e+07 313 2.00684e+07 1.01442e+07 0.00311964 1.99752e+07 49.8836 0.0527557 0.996016 0 50.4408 GTEX-11EMC-0011-R11b-SM-DNZZK B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986049 610266 0.950605 0.990424 0.760415 23560 1 76 0.00252762 269 0 9.15374e+07 0.0490466 2.7891e+06 9.24225e+07 9.78352e+06 23595 4.54231e+07 0 0.19019 0.990424 0.753133 9.15374e+07 0.00462501 1.97048e+07 1.50408e+07 1.99714e+07 269 2.01107e+07 9.66892e+06 0.00357169 1.99096e+07 49.7488 0.0301777 0.994798 0 50.336 GTEX-11EMC-0011-R2b-SM-DO114 B1, A1 7.1 Brain Brain - Substantia nigra 0002038 640 BP-42439 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987002 319281 0.970808 0.991401 0.860297 21103 1 76 0.00211873 271 0 7.1586e+07 0.0290278 7.97916e+06 7.22069e+07 7.56202e+06 21114 3.55455e+07 0 0.110511 0.991401 0.8529 7.1586e+07 0.00432313 1.55059e+07 1.72868e+07 1.6391e+07 297 1.6149e+07 5.35925e+06 0.00321604 1.59947e+07 49.76 0.110504 0.9958 0 51.3874 GTEX-11EMC-0011-R8b-SM-DO91Z B1, A1 5.7 Brain Brain - Hypothalamus 0001898 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995826 272766 0.967304 0.996564 0.845124 21248 1 76 0.00157982 385 0 8.45888e+07 0.0325459 1.03499e+07 8.48805e+07 4.88357e+06 21263 4.21891e+07 0 0.12218 0.996564 0.84222 8.45888e+07 0.00212697 1.86011e+07 1.71494e+07 1.91588e+07 352 1.87841e+07 6.82883e+06 0.00185319 1.90173e+07 50.3084 0.121935 0.997301 0 50.7384 GTEX-11EMC-0011-R9b-SM-DO921 B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 640 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995019 527505 0.957046 0.995684 0.814644 23456 1 76 0.00181039 407 0 1.01397e+08 0.0426174 5.08563e+06 1.01836e+08 5.85451e+06 23482 5.05604e+07 0 0.142401 0.995684 0.811128 1.01397e+08 0.00207511 2.23576e+07 1.46404e+07 2.28498e+07 339 2.25718e+07 1.29985e+07 0.00194266 2.26935e+07 50.1345 0.0499392 0.99635 0 50.5445 GTEX-11EMC-0126-SM-5EGKV 1 B1 2 pieces, fibrin deposition in alveolar septa 7.6 Lung Lung 0008952 670 730 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986789 300180 0.977506 0.990825 0.811873 22783 1 76 0.00214945 167 0 7.83889e+07 0.0218845 403647 7.91148e+07 7.01031e+06 22808 3.89192e+07 0 0.165633 0.990825 0.804424 7.83889e+07 0.0033022 1.72756e+07 8.02376e+06 1.75191e+07 196 1.75797e+07 1.3713e+07 0.00272348 1.75166e+07 49.91 0.00510204 0.994861 0 50.3499 GTEX-11EMC-0226-SM-5EGLP 1 B1 2 pieces, no significant findings 6 Thyroid Thyroid 0002046 673 727 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990818 270022 0.970838 0.993143 0.768484 24694 1 76 0.00193587 210 0 9.04846e+07 0.0288508 311030 9.11094e+07 7.26332e+06 24730 4.5003e+07 0 0.202354 0.993143 0.763215 9.04846e+07 0.00305616 1.97815e+07 9.29644e+06 1.99981e+07 226 2.00002e+07 1.47914e+07 0.0024947 1.99819e+07 49.9771 0.00341381 0.995467 0 50.2722 GTEX-11EMC-0526-SM-5EGJN 3 B1 2 pieces, ~50% adherent fat/stroma. All cortex, markedly autolyzed 5.7 Adrenal Gland Adrenal Gland 0002369 718 682 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.971357 339050 0.966099 0.975198 0.767838 23055 1 76 0.00227902 200 0 8.12529e+07 0.033682 3.16834e+06 8.33194e+07 7.80937e+06 23083 4.03199e+07 0 0.198261 0.975198 0.748794 8.12529e+07 0.00348651 1.74346e+07 1.50704e+07 1.75327e+07 245 1.752e+07 8.86171e+06 0.00288038 1.77351e+07 50.3051 0.0380264 0.979039 0 50.1403 GTEX-11EMC-0726-SM-5EGJO 1 B1 2 pieces, minimal fibrosis, focal microinfarct delineated 6.5 Heart Heart - Left Ventricle 0006566 710 690 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987261 216664 0.980793 0.99003 0.817467 21320 1 76 0.0016287 267 0 8.62176e+07 0.0190838 4.90731e+06 8.70858e+07 7.50499e+06 21336 4.29039e+07 0 0.163326 0.99003 0.809317 8.62176e+07 0.0026689 1.9032e+07 3.61845e+07 1.8918e+07 303 1.8839e+07 9.07223e+06 0.00214734 1.9304e+07 50.6095 0.0563503 0.992799 0 49.8498 GTEX-11EMC-0826-SM-59862 1 B1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 713 687 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981642 238833 0.976079 0.986924 0.811208 22640 1 76 0.00250038 195 0 7.98343e+07 0.0237284 2.58723e+06 8.08921e+07 1.94972e+07 22663 3.96274e+07 0 0.164871 0.986924 0.8006 7.98343e+07 0.0061148 1.74234e+07 1.45442e+07 1.71352e+07 239 1.72622e+07 1.01354e+07 0.00429792 1.76483e+07 50.553 0.0319837 0.992205 0 49.583 GTEX-11EMC-0926-SM-59863 1 B1 6 pieces, adherent fat serosa up to ~0.5mm, rep delineated 5.9 Blood Vessel Artery - Aorta 0001496 715 685 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979144 292253 0.974383 0.98388 0.756315 23384 1 76 0.00285001 139 0 7.5893e+07 0.0251526 198701 7.71364e+07 1.58482e+07 23414 3.76413e+07 0 0.218068 0.98388 0.744123 7.5893e+07 0.00618532 1.64404e+07 8.44587e+06 1.65709e+07 153 1.66755e+07 1.28299e+07 0.00450964 1.66815e+07 50.0091 0.00257597 0.988616 0 50.1976 GTEX-11EMC-1426-SM-5N9E4 1 B1 6 pieces, all muscularis, good specimens 5.7 Colon Colon - Sigmoid 0001159 723 677 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987486 336848 0.969475 0.989057 0.783192 24100 1 76 0.00399189 274 0 1.07036e+08 0.0303127 1.03232e+06 1.0822e+08 5.71697e+06 24138 5.31779e+07 0 0.186283 0.989057 0.774622 1.07036e+08 0.0041133 2.30483e+07 1.01419e+07 2.31714e+07 318 2.31023e+07 1.58312e+07 0.0040525 2.3281e+07 50.1926 0.00953913 0.990629 0 50.1331 GTEX-11EMC-1726-SM-5H11P 1 B1 2 pieces, typical post menopausal atrophy 7.6 Ovary Ovary 0000992 731 669 BP-43783 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.989054 282798 0.966502 0.99178 0.719543 22779 1 76 0.00213826 140 0 6.91775e+07 0.0332123 82030 6.97509e+07 8.90165e+06 22814 3.43899e+07 0 0.246959 0.99178 0.713628 6.91775e+07 0.00346342 1.5122e+07 1.05939e+07 1.52785e+07 143 1.53267e+07 1.23786e+07 0.00279902 1.52674e+07 49.9031 0.00117604 0.994505 0 50.2574 GTEX-11EMC-1826-SM-5A5JT 1 B1 6 pieces, mainly myometrium, atophic endometrium with cystic change present, ~1mm thick, rep delineated 6.6 Uterus Uterus 0000995 732 668 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988719 211305 0.966468 0.991571 0.691193 23970 1 76 0.00229674 145 0 7.72226e+07 0.0332294 150904 7.78791e+07 9.78328e+06 24023 3.83865e+07 0 0.275275 0.991571 0.685367 7.72226e+07 0.0040591 1.68442e+07 8.70902e+06 1.70352e+07 153 1.70739e+07 1.18453e+07 0.00317539 1.7015e+07 49.9137 0.00193767 0.994422 0 50.2818 GTEX-11EMC-1926-SM-5A5JU 2 B1 6 pieces, quamous mucosa ~50 microns, beginning to slough 6.5 Vagina Vagina 0000996 735 665 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990355 223432 0.972726 0.992614 0.746325 23150 1 76 0.00213858 141 0 7.09909e+07 0.0270622 280118 7.15191e+07 7.75778e+06 23180 3.53309e+07 0 0.226401 0.992614 0.740813 7.09909e+07 0.00400664 1.58082e+07 9.67599e+06 1.60162e+07 156 1.60204e+07 1.11931e+07 0.00307048 1.59584e+07 49.903 0.00391669 0.994873 0 50.3269 GTEX-11EMC-2026-SM-5A5JV 1 B1 2 pieces, fibrocystic change, prominent simple hyperplasia in one TDLU, encircled and delineated, one section 6.2 Breast Breast - Mammary Tissue 0008367 736 664 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989291 256011 0.967915 0.992032 0.710149 25683 1 76 0.00224481 169 0 8.80181e+07 0.0317544 473640 8.87251e+07 1.12504e+07 25732 4.37704e+07 0 0.257766 0.992032 0.704491 8.80181e+07 0.00415671 1.93151e+07 9.8993e+06 1.95409e+07 199 1.95749e+07 1.25986e+07 0.00319812 1.95057e+07 49.9115 0.00533829 0.994773 0 50.2906 GTEX-11EMC-2226-SM-5A5JW 2 B1 3 pieces, squamous mucosa up to ~50-70% thickness, partially sloughing 8.3 Esophagus Esophagus - Mucosa 0006920 740 660 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990154 325602 0.972828 0.992704 0.734309 22769 1 76 0.00219098 143 0 7.26085e+07 0.0269541 244011 7.31422e+07 8.20525e+06 22794 3.61233e+07 0 0.238519 0.992704 0.728951 7.26085e+07 0.00393536 1.62685e+07 1.21812e+07 1.65093e+07 154 1.65528e+07 1.19481e+07 0.00306093 1.64039e+07 49.7742 0.00333612 0.995253 0 50.3673 GTEX-11EMC-2526-SM-5PNVU 1 B1 2 pieces, glandular parenchyma is ~50% of each section, delineated; rest is skeletal muscae/squamous mucosa of lip 9.1 Salivary Gland Minor Salivary Gland 0006330 746 654 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991994 191193 0.977139 0.993276 0.79711 22556 1 76 0.00217656 137 0 7.11215e+07 0.0225299 288458 7.16029e+07 6.55989e+06 22575 3.54435e+07 0 0.180029 0.993276 0.79175 7.11215e+07 0.00304406 1.61098e+07 1.1882e+07 1.61596e+07 159 1.61534e+07 1.34707e+07 0.00260975 1.62049e+07 50.0795 0.00402858 0.994558 0 50.0772 GTEX-11EMC-2626-SM-59864 0 B1 2 pieces, 10-15% interstitial fat, rep foci delineated 8.4 Muscle Muscle - Skeletal 0011907 805 595 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986919 241278 0.98155 0.99049 0.847847 20220 1 76 0.00233908 135 0 7.40286e+07 0.0182414 618638 7.47394e+07 1.45318e+07 20237 3.6814e+07 0 0.133703 0.99049 0.839784 7.40286e+07 0.00556548 1.62592e+07 8.14058e+06 1.61206e+07 161 1.61971e+07 1.52772e+07 0.00394646 1.64239e+07 50.3475 0.00827727 0.99406 0 49.7859 GTEX-11EMC-2826-SM-5PNY6 0 B1 2 pieces, ~20% fascia/fibrous tissue, rep delineated 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 808 592 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991195 266389 0.97407 0.991835 0.796154 24107 1 76 0.00312922 278 0 1.03467e+08 0.0256187 339813 1.04319e+08 2.99658e+06 24136 5.15535e+07 0 0.177916 0.991835 0.789654 1.03467e+08 0.00351983 2.26107e+07 1.07508e+07 2.27553e+07 280 2.26819e+07 1.85267e+07 0.0033244 2.27447e+07 50.0692 0.00325745 0.992475 0 50.1594 GTEX-11EMC-2926-SM-5EQ4F 0 B1 6 pieces, focal adherent dermal fat 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 809 591 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990444 253497 0.968622 0.992839 0.753131 24149 1 76 0.00207859 151 0 6.48146e+07 0.0311533 211848 6.52821e+07 7.58489e+06 24180 3.22418e+07 0 0.215492 0.992839 0.747737 6.48146e+07 0.00323245 1.41319e+07 7.18944e+06 1.4266e+07 147 1.42671e+07 1.03513e+07 0.00265413 1.42786e+07 50.0201 0.00324512 0.995233 0 50.2361 GTEX-11EMC-3026-SM-5EQ4R 0 B1 2 pieces, one section with adherent fibrous tissue up to ~0.5mm, delineated 5.7 Blood Vessel Artery - Tibial 0007610 810 590 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989127 200778 0.97014 0.99167 0.749246 21944 1 76 0.00215091 129 0 6.70711e+07 0.0295611 597621 6.76344e+07 8.69292e+06 21976 3.33228e+07 0 0.220894 0.99167 0.743005 6.70711e+07 0.00323862 1.45365e+07 6.42292e+06 1.4626e+07 152 1.46088e+07 9.99841e+06 0.00269337 1.47162e+07 50.1832 0.00883605 0.994214 0 50.1534 GTEX-11EMC-3126-SM-5EGJP 1 B1 2 pieces, all adenohypophysis; 5mm nubbin adherent dura on one, delineated 6.4 Pituitary Pituitary 0000007 858 542 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989283 231679 0.962202 0.991754 0.745654 25581 1 76 0.00201771 162 0 7.55001e+07 0.0375332 432849 7.61279e+07 6.77492e+06 25618 3.7552e+07 0 0.216548 0.991754 0.739505 7.55001e+07 0.00298709 1.61684e+07 9.32651e+06 1.63199e+07 177 1.63368e+07 1.10066e+07 0.00250119 1.63267e+07 49.9845 0.00568581 0.994224 0 50.2333 GTEX-11EMC-3226-SM-5EGKW 1 B1 2 pieces (fragmented), no abnormalities 6 Brain Brain - Cortex 0001870 864 536 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987933 461204 0.959472 0.991867 0.821462 23573 1 76 0.00177346 265 0 7.76089e+07 0.0402333 4.52684e+06 7.82453e+07 6.79983e+06 23591 3.85637e+07 0 0.13801 0.991867 0.814781 7.76089e+07 0.00304493 1.68749e+07 2.54874e+07 1.69738e+07 292 1.69313e+07 7.77172e+06 0.00240667 1.71817e+07 50.367 0.0578545 0.995801 0 50.1462 GTEX-11EMC-3326-SM-5P9JH 1 B1 2 pieces, no abnormalities 6.9 Brain Brain - Cerebellum 0002037 866 534 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991154 845226 0.92784 0.991725 0.710424 24298 1 76 0.00338521 268 0 9.25198e+07 0.0718144 1.85675e+06 9.32918e+07 3.0322e+06 24330 4.60726e+07 0 0.217416 0.991725 0.704545 9.25198e+07 0.00367945 1.95757e+07 3.80813e+07 1.98347e+07 260 1.97518e+07 9.64324e+06 0.00353225 1.97182e+07 49.9575 0.0199026 0.992295 0 50.3286 GTEX-11EQ8-0001-SM-58Q82 C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EQ8-0001-SM-5DWSU C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EQ8-0001-SM-6WBTP C1 Blood Whole Blood 0013756 352 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EQ8-0006-SM-5P9HJ C1 6.6 Blood Whole Blood 0013756 352 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.969971 613790 0.969943 0.970949 0.808133 18590 1 76 0.00363866 160 0 1.03075e+08 0.0284448 499050 1.06159e+08 3.74065e+06 18598 5.12439e+07 0 0.16181 0.970949 0.784656 1.03075e+08 0.00442219 2.38622e+07 1.38201e+08 2.42388e+07 178 2.41817e+07 2.53163e+07 0.00403003 2.40483e+07 49.8616 0.00470098 0.971928 0 50.3915 GTEX-11EQ8-0008-SM-5Q5DJ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 461 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993027 240301 0.982062 0.994908 0.886435 19989 1 76 0.00179863 218 0 8.71494e+07 0.0175826 390235 8.75954e+07 1.12368e+07 20000 4.34183e+07 0 0.095627 0.994908 0.881922 8.71494e+07 0.00290113 1.96679e+07 1.11778e+07 1.9737e+07 232 1.97453e+07 2.37614e+07 0.00234883 1.9823e+07 50.0982 0.00445497 0.99679 0 50.0877 GTEX-11EQ8-0126-SM-5EQ54 1 C1 6 pieces, minimal attached and internal fat (<10%) 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 460 647 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.988202 297699 0.972237 0.991848 0.77904 22904 1 76 0.0020712 148 0 7.08825e+07 0.027447 313932 7.14651e+07 9.77943e+06 22928 3.52056e+07 0 0.193197 0.991848 0.772689 7.08825e+07 0.00330615 1.54443e+07 6.38844e+06 1.55884e+07 162 1.56285e+07 1.18417e+07 0.00268641 1.56486e+07 50.0321 0.0043928 0.995493 0 50.232 GTEX-11EQ8-0226-SM-5EQ5G 1 C1 2 pieces 6 Adipose Tissue Adipose - Subcutaneous 0002190 463 645 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990001 323714 0.972352 0.992716 0.765214 23290 1 76 0.00204416 145 0 6.88903e+07 0.027402 423432 6.93957e+07 8.54064e+06 23317 3.42418e+07 0 0.207138 0.992716 0.75964 6.88903e+07 0.00309563 1.51204e+07 6.71051e+06 1.52571e+07 159 1.52476e+07 1.09247e+07 0.00256846 1.53096e+07 50.1015 0.0061017 0.995432 0 50.2251 GTEX-11EQ8-0426-SM-5N9DP 1 C1 2 pieces, well trimmed 6.1 Blood Vessel Artery - Tibial 0007610 468 641 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991559 176298 0.972777 0.992539 0.81251 21597 1 76 0.00281692 169 0 7.70097e+07 0.0269092 397920 7.75886e+07 3.814e+06 21616 3.83382e+07 0 0.160266 0.992539 0.806448 7.70097e+07 0.00340583 1.67525e+07 6.88782e+06 1.68181e+07 187 1.67555e+07 1.30546e+07 0.00311108 1.68897e+07 50.1993 0.00512859 0.993519 0 50.0976 GTEX-11EQ8-0526-SM-5N9BC 1 C1 2 pieces, 5% internal fat, one piece has attachment of 10% additional fat and vessels 7.6 Muscle Muscle - Skeletal 0011907 471 639 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993411 194742 0.979735 0.994294 0.862568 19722 1 76 0.00252128 209 0 8.55792e+07 0.020043 5.12091e+06 8.60702e+07 3.8225e+06 19728 4.26554e+07 0 0.117167 0.994294 0.857646 8.55792e+07 0.00307067 1.87005e+07 8.86426e+06 1.87595e+07 236 1.87177e+07 1.65153e+07 0.00279573 1.8814e+07 50.1284 0.0594969 0.995178 0 50.0787 GTEX-11EQ8-0826-SM-5N9FG 2 C1 2 pieces, fibrosis, nodularity with few collections of lymphocytes 5.7 Thyroid Thyroid 0002046 498 614 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98792 276881 0.961306 0.989533 0.748906 24464 1 76 0.00405056 144 0 7.96328e+07 0.0383678 1.49416e+06 8.04752e+07 3.79556e+06 24495 3.95664e+07 0 0.2124 0.989533 0.741067 7.96328e+07 0.00421563 1.74002e+07 1.02802e+07 1.7437e+07 165 1.74334e+07 1.24555e+07 0.00413296 1.75312e+07 50.1399 0.0185667 0.991145 0 50.0528 GTEX-11EQ8-0926-SM-5H12V 1 C1 6 pieces, 5-10% attached and internal fat, overlying crust of degenerating cells 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 499 613 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.988489 226385 0.977437 0.991343 0.7803 22422 1 76 0.00209782 171 0 6.86085e+07 0.0223583 903059 6.92076e+07 8.96203e+06 22443 3.41081e+07 0 0.197137 0.991343 0.773545 6.86085e+07 0.00356536 1.5061e+07 7.49452e+06 1.51434e+07 171 1.51492e+07 1.01384e+07 0.00282948 1.52499e+07 50.1657 0.0130485 0.994198 0 50.1365 GTEX-11EQ8-1326-SM-5EGJQ 1 C1 2 pieces, interstitial fibrosis, one piece is up to ~40% fat/fibrosis 6.2 Heart Heart - Atrial Appendage 0006631 509 606 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988265 239642 0.976849 0.992145 0.8185 22101 1 76 0.00186772 268 0 8.23857e+07 0.02295 4.85402e+06 8.30379e+07 7.68835e+06 22115 4.09294e+07 0 0.158348 0.992145 0.812071 8.23857e+07 0.00326163 1.82366e+07 1.85821e+07 1.83468e+07 281 1.83292e+07 1.02445e+07 0.00256195 1.85387e+07 50.2841 0.0584554 0.996024 0 50.1507 GTEX-11EQ8-1426-SM-5EGJR 1 C1 2 pieces, spermatogenesis 6 Testis Testis 0000473 511 604 BP-44460 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98934 342324 0.930668 0.992087 0.741151 31760 1 76 0.00192839 149 0 7.37068e+07 0.0689965 1.02191e+06 7.42947e+07 6.33368e+06 31811 3.66589e+07 0 0.189517 0.992087 0.735286 7.37068e+07 0.00288474 1.51887e+07 9.94747e+06 1.52742e+07 157 1.53263e+07 1.19479e+07 0.00240524 1.53194e+07 49.9888 0.0137548 0.994834 0 50.1404 GTEX-11EQ8-2626-SM-5N9BO 2 C1 6 pieces, muscularis, small focus of autolyzed mucosa 5.7 Colon Colon - Sigmoid 0001159 539 583 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988351 144860 0.970289 0.989026 0.816552 22199 1 76 0.00279487 162 0 7.44791e+07 0.0294552 1.20651e+06 7.53055e+07 3.64257e+06 22216 3.70618e+07 0 0.153737 0.989026 0.807591 7.44791e+07 0.0034133 1.64099e+07 1.1151e+07 1.64958e+07 175 1.64116e+07 1.32899e+07 0.00310387 1.65499e+07 50.2098 0.0160215 0.989701 0 50.1306 GTEX-11EQ8-2826-SM-5N9C1 1 C1 4 pieces, Purkinje cells with some evidence of ischemic change 6.4 Brain Brain - Cerebellum 0002037 557 567 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.990231 385248 0.932563 0.991192 0.690181 22905 1 76 0.00312575 152 0 7.41949e+07 0.0671431 1.24833e+06 7.48542e+07 3.73884e+06 22931 3.69179e+07 0 0.242382 0.991192 0.684102 7.41949e+07 0.00369641 1.58859e+07 2.0328e+07 1.60128e+07 167 1.59906e+07 7.49256e+06 0.0034108 1.59778e+07 49.9801 0.0166768 0.992154 0 50.1988 GTEX-11EQ9-0002-SM-5QGQ1 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -165 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993334 258723 0.968217 0.994526 0.806334 19628 1 76 0.00195179 123 0 5.30442e+07 0.0312626 327881 5.33361e+07 3.73627e+06 19645 2.64283e+07 0 0.161884 0.994526 0.80192 5.30442e+07 0.00276759 1.17686e+07 7.57773e+06 1.1861e+07 114 1.18655e+07 1.19592e+07 0.0023592 1.1831e+07 49.9274 0.00614744 0.995717 0 50.1954 GTEX-11EQ9-0003-SM-58Q7V B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11EQ9-0003-SM-5DWSP B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11EQ9-0003-SM-6WBTK B1 Blood Whole Blood 0013756 -165 BP-39368 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/24/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11EQ9-0006-SM-5LUB6 B1 9.3 Blood Whole Blood 0013756 -165 BP-39302 RNA isolation_PAXgene Blood RNA (Manual) 05/23/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.973458 773983 0.967789 0.975148 0.8078 17461 1 76 0.00453875 89 0 7.73825e+07 0.0308614 185146 7.93546e+07 6.8647e+06 17468 3.84621e+07 0 0.159989 0.975148 0.787725 7.73825e+07 0.00385597 1.79078e+07 1.2165e+08 1.81198e+07 113 1.816e+07 2.06924e+07 0.00419795 1.80165e+07 49.8016 0.00233315 0.976838 0 50.2942 GTEX-11EQ9-0008-SM-5Q5DK B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 321 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991558 214604 0.978519 0.993613 0.893803 20290 1 76 0.00266048 286 0 1.01636e+08 0.02131 694765 1.02289e+08 1.51349e+07 20298 5.06293e+07 0 0.0847159 0.993613 0.888095 1.01636e+08 0.00358303 2.22765e+07 1.44473e+07 2.26412e+07 312 2.25055e+07 2.0262e+07 0.0031208 2.2623e+07 50.1302 0.00679219 0.995667 0 50.406 GTEX-11EQ9-0126-SM-5986I 1 B1 2 pieces, one ~50% fat,/cortex delineated; the other with well- defined central medulla (ensquared) and cortex, all well-preserved: valuable specimen 8.2 Adrenal Gland Adrenal Gland 0002369 71 628 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986563 275003 0.979543 0.99111 0.837976 21833 1 76 0.0026674 198 0 7.61447e+07 0.0201405 1.74762e+06 7.68276e+07 1.79867e+07 21852 3.7821e+07 0 0.141567 0.99111 0.830527 7.61447e+07 0.00588213 1.69944e+07 1.48996e+07 1.6653e+07 215 1.66348e+07 1.10661e+07 0.00426739 1.72994e+07 50.9792 0.0227473 0.995658 0 49.4926 GTEX-11EQ9-0226-SM-5A5JX 1 B1 2 pieces, patchy congestion 8.3 Lung Lung 0008952 74 625 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991271 300578 0.975837 0.993813 0.805172 23074 1 76 0.00204495 164 0 7.75523e+07 0.0238267 467599 7.80351e+07 8.3484e+06 23104 3.8592e+07 0 0.170666 0.993813 0.80019 7.75523e+07 0.00379499 1.71642e+07 7.27876e+06 1.73924e+07 185 1.74075e+07 1.40043e+07 0.00291773 1.73328e+07 49.8924 0.00599216 0.996356 0 50.3302 GTEX-11EQ9-0426-SM-5A5JY 1 B1 2 pieces, minimal congestion 8.1 Spleen Spleen 0002106 80 619 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990189 276776 0.967462 0.992625 0.774926 23972 1 76 0.00229415 204 0 8.28488e+07 0.0318058 634966 8.34644e+07 1.00595e+07 24004 4.12182e+07 0 0.192536 0.992625 0.769211 8.28488e+07 0.00391308 1.82841e+07 1.22885e+07 1.84592e+07 218 1.84852e+07 1.33824e+07 0.00310163 1.84474e+07 49.9487 0.00760763 0.995061 0 50.2382 GTEX-11EQ9-0526-SM-5A5JZ 1 B1 2 pieces, diffuse macro and microvesucular steatosis, nodular regenerative changes 8.1 Liver Liver 0001114 82 617 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992446 289746 0.980664 0.994586 0.850242 21355 1 76 0.00194535 199 0 9.33558e+07 0.0190148 747922 9.38639e+07 1.1229e+07 21376 4.64951e+07 0 0.130422 0.994586 0.845639 9.33558e+07 0.00354541 2.00949e+07 1.7047e+07 2.00786e+07 255 2.01036e+07 1.99366e+07 0.00274366 2.02555e+07 50.1882 0.00796815 0.996726 0 49.9797 GTEX-11EQ9-0626-SM-5A5K1 1 B1 2 pieces, focal lyphocytic thyroiditis, delineated, adherent fibrous/adipose tissue ~1mm 6.7 Thyroid Thyroid 0002046 84 615 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990775 300528 0.969942 0.993302 0.753527 24782 1 76 0.00200393 273 0 1.03559e+08 0.0297751 426674 1.04257e+08 1.22007e+07 24827 5.15457e+07 0 0.216415 0.993302 0.74848 1.03559e+08 0.00386911 2.27157e+07 1.14513e+07 2.28226e+07 267 2.28723e+07 1.6117e+07 0.00293415 2.29048e+07 50.0355 0.00409252 0.995828 0 50.1174 GTEX-11EQ9-0726-SM-5A5K2 1 B1 6 pieces, squamous mucosa up to ~0.5mm thick, numberous mubmucosal mucous glands present, rep. delineated 9.4 Esophagus Esophagus - Mucosa 0006920 93 606 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989946 215481 0.975981 0.992276 0.81618 22428 1 76 0.00209199 165 0 7.8419e+07 0.0235418 349710 7.90294e+07 8.71131e+06 22446 3.90389e+07 0 0.159801 0.992276 0.809876 7.8419e+07 0.00402726 1.75859e+07 1.21559e+07 1.77333e+07 185 1.77744e+07 1.60196e+07 0.00305735 1.77173e+07 49.9196 0.00442506 0.994607 0 50.2087 GTEX-11EQ9-0826-SM-5986Y 1 B1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 96 603 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.988042 316808 0.974491 0.991747 0.839007 21619 1 76 0.0025166 164 0 7.38755e+07 0.0252003 527583 7.44903e+07 1.41671e+07 21636 3.67265e+07 0 0.135484 0.991747 0.832083 7.38755e+07 0.00593409 1.58846e+07 9.58855e+06 1.58178e+07 172 1.58551e+07 1.30444e+07 0.00421896 1.60967e+07 50.378 0.00708257 0.995452 0 49.8946 GTEX-11EQ9-0926-SM-5HL6I 1 B1 6 pieces, all muscularis, good specimens 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 99 600 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990465 227623 0.976748 0.99292 0.827603 21045 1 76 0.00198649 150 0 6.48964e+07 0.0229281 406784 6.53591e+07 7.00229e+06 21061 3.22902e+07 0 0.149144 0.99292 0.821744 6.48964e+07 0.0031106 1.39842e+07 6.38288e+06 1.4153e+07 157 1.41224e+07 1.13618e+07 0.00254716 1.41639e+07 50.0734 0.00622383 0.995375 0 50.2999 GTEX-11EQ9-1026-SM-5H134 1 B1 2 pieces, well-preserved, Islets well visualized; rep. delineated 7.3 Pancreas Pancreas 0001150 104 595 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4805 02/27/2014 TruSeq.v1 RNASEQ 0.991739 323654 0.977293 0.993582 0.834216 21830 1 76 0.00227517 127 0 9.05614e+07 0.0222606 240411 9.11464e+07 1.08049e+07 21854 4.50862e+07 0 0.143077 0.993582 0.828862 9.05614e+07 0.00319887 2.06894e+07 2.21824e+07 2.09096e+07 150 2.08495e+07 2.49703e+07 0.00273616 2.09116e+07 50.0743 0.00263764 0.995425 0 50.2647 GTEX-11EQ9-1126-SM-5987I 1 B1 2 pieces, !0% fibrovascular tissue, delineated 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 105 594 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984967 244458 0.975288 0.989607 0.867754 21893 1 76 0.00250058 207 0 7.78423e+07 0.0244708 518500 7.86598e+07 1.64649e+07 21905 3.86643e+07 0 0.107534 0.989607 0.858736 7.78423e+07 0.00605168 1.68993e+07 1.03927e+07 1.70236e+07 223 1.70566e+07 1.27812e+07 0.00426781 1.71985e+07 50.2071 0.00659167 0.994247 0 50.1831 GTEX-11EQ9-1226-SM-5987E 1 B1 6 pieces, mucosa is ~1mm thick, ~30% thickness 7.4 Stomach Stomach 0000945 108 591 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982967 244987 0.977324 0.988673 0.827388 22297 1 76 0.00255456 169 0 7.20264e+07 0.0224406 485027 7.28516e+07 1.69519e+07 22315 3.57343e+07 0 0.149936 0.988673 0.818016 7.20264e+07 0.00642546 1.57448e+07 7.97851e+06 1.57913e+07 170 1.58837e+07 1.17095e+07 0.00447883 1.60318e+07 50.2319 0.00665774 0.994379 0 50.0739 GTEX-11EQ9-1326-SM-5985X 1 B1 6 pieces, well - preserved mucosa; rep lymphoid aggregates delineated 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 113 586 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984005 249716 0.970867 0.988395 0.784802 23926 1 76 0.00304317 154 0 7.42221e+07 0.0282642 524029 7.50935e+07 1.54049e+07 23955 3.68402e+07 0 0.186064 0.988395 0.775695 7.42221e+07 0.00662227 1.6558e+07 1.06081e+07 1.63863e+07 159 1.6481e+07 1.19812e+07 0.00482477 1.67661e+07 50.4287 0.00697836 0.992786 0 49.7395 GTEX-11EQ9-1426-SM-5987G 1 B1 6 pieces, mucosa is 5-10% thickness, ~0.2-0.4mm thick 8 Colon Colon - Transverse 0001157 116 583 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985419 266003 0.976183 0.990464 0.829539 22450 1 76 0.00254397 141 0 7.1957e+07 0.0235337 379473 7.26498e+07 1.51897e+07 22465 3.57242e+07 0 0.146644 0.990464 0.821628 7.1957e+07 0.00629591 1.57059e+07 7.32356e+06 1.57401e+07 164 1.58341e+07 1.25053e+07 0.00441039 1.59461e+07 50.1761 0.00522332 0.995509 0 50.0545 GTEX-11EQ9-1526-SM-5PNY7 1 B1 6 pieces, muscularis, adherent rim of serosa/fat up to ~1.5mm 6.3 Colon Colon - Sigmoid 0001159 124 575 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990166 304522 0.974381 0.991066 0.823741 24481 1 76 0.0030352 382 0 1.18916e+08 0.0252863 864239 1.19987e+08 3.2997e+06 24511 5.92482e+07 0 0.15064 0.991066 0.816382 1.18916e+08 0.00349268 2.58664e+07 1.10732e+07 2.62053e+07 332 2.60311e+07 2.01322e+07 0.00326373 2.61413e+07 50.1056 0.00720275 0.991967 0 50.3254 GTEX-11EQ9-1626-SM-5PNY8 0 B1 6 pieces, minimal dermal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 126 573 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992382 194837 0.974555 0.992884 0.814436 24080 1 76 0.00305498 287 0 9.47357e+07 0.0251916 591221 9.54147e+07 2.71509e+06 24104 4.71944e+07 0 0.160118 0.992884 0.808641 9.47357e+07 0.00341683 2.09118e+07 1.06707e+07 2.11078e+07 264 2.10066e+07 1.70265e+07 0.00323581 2.10631e+07 50.0672 0.00619633 0.993386 0 50.2332 GTEX-11EQ9-1726-SM-5HL6U 1 B1 2 pieces, glandular hyperplastic pattern 7.6 Prostate Prostate 0002367 130 569 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991462 248848 0.973891 0.993872 0.83819 22334 1 76 0.00194717 124 0 5.48093e+07 0.0258381 264075 5.51472e+07 5.89368e+06 22348 2.72678e+07 0 0.135701 0.993872 0.833053 5.48093e+07 0.0030773 1.18616e+07 4.97369e+06 1.19276e+07 135 1.18863e+07 1.01605e+07 0.00251086 1.20307e+07 50.3019 0.00478854 0.996282 0 50.1388 GTEX-11EQ9-1826-SM-5Q5AJ 1 B1 2 pieces, gynecomastoid stromal hyperplasia is one, encircled; with prominent ductal elements, delineated (rep) 6 Breast Breast - Mammary Tissue 0008367 131 568 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986764 194210 0.973016 0.988584 0.823716 23152 1 76 0.00176137 205 0 7.85222e+07 0.026723 430153 7.94289e+07 5.74674e+06 23174 3.90954e+07 0 0.1493 0.988584 0.814312 7.85222e+07 0.00270918 1.71501e+07 8.94861e+06 1.72847e+07 208 1.72147e+07 1.39287e+07 0.0022344 1.73622e+07 50.2134 0.00541557 0.990404 0 50.1954 GTEX-11EQ9-1926-SM-5PNVV 0 B1 2 pieces, spermatogenesis is present 7.9 Testis Testis 0000473 134 565 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991694 310842 0.933025 0.993396 0.750688 31555 1 76 0.00191915 152 0 7.66783e+07 0.0666175 530755 7.71881e+07 6.7713e+06 31603 3.82018e+07 0 0.182336 0.993396 0.745731 7.66783e+07 0.00281679 1.59673e+07 1.20705e+07 1.60101e+07 159 1.60466e+07 1.40308e+07 0.0023672 1.60485e+07 50.003 0.00687612 0.995098 0 50.067 GTEX-11EQ9-2026-SM-5P9JI 1 B1 2 pieces, 40% delineated glandular elements; rest is stroma/mucosa/muscle 8 Salivary Gland Minor Salivary Gland 0006330 141 558 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.989883 272365 0.973221 0.990392 0.796651 24881 1 76 0.00349841 285 0 1.15804e+08 0.0250324 434724 1.16928e+08 3.76418e+06 24915 5.76132e+07 0 0.17657 0.990392 0.788997 1.15804e+08 0.00369805 2.60189e+07 2.30747e+07 2.62707e+07 312 2.62090e+07 1.89943e+07 0.00359818 2.61365e+07 49.9307 0.00371789 0.9909 0 50.2408 GTEX-11EQ9-2126-SM-5PNVW 1 B1 2 pieces, 5% interstitial fat, rep delineated 8.7 Muscle Muscle - Skeletal 0011907 318 381 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993896 174074 0.984482 0.995073 0.883277 18734 1 76 0.00170913 172 0 7.01868e+07 0.0152729 540993 7.05343e+07 6.31186e+06 18739 3.49928e+07 0 0.101205 0.995073 0.878925 7.01868e+07 0.00259351 1.53855e+07 8.88066e+06 1.54707e+07 182 1.54119e+07 1.48685e+07 0.0021508 1.55168e+07 50.1696 0.00766993 0.99625 0 50.1382 GTEX-11EQ9-2226-SM-5987H 0 B1 2 pieces, nubbin adherent fat on one section, delineated, ~1.5mm 8.1 Blood Vessel Artery - Tibial 0007610 319 380 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983245 253091 0.977286 0.988041 0.863338 20595 1 76 0.00248841 166 0 7.56448e+07 0.0222988 266348 7.65604e+07 1.69234e+07 20605 3.75511e+07 0 0.113948 0.988041 0.853014 7.56448e+07 0.00609877 1.6156e+07 7.27831e+06 1.62579e+07 168 1.63365e+07 1.5728e+07 0.00428482 1.64171e+07 50.1232 0.00347893 0.992838 0 50.1572 GTEX-11EQ9-2326-SM-5HL5H 0 B1 2 pieces, trace adherent fat, delineated, good specimens 7.2 Nerve Nerve - Tibial 0001323 320 379 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989475 448195 0.952955 0.992054 0.749544 23271 1 76 0.00209407 171 0 7.01178e+07 0.0467406 252575 7.06794e+07 7.12635e+06 23301 3.48731e+07 0 0.20341 0.992054 0.743588 7.01178e+07 0.00321731 1.50979e+07 1.86156e+07 1.53418e+07 157 1.5333e+07 1.11959e+07 0.00265423 1.52807e+07 49.9145 0.00357353 0.994633 0 50.4006 GTEX-11EQ9-2426-SM-5HL5T 0 B1 6 pieces, minimal adherent fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 321 378 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990953 210818 0.973307 0.993101 0.79695 21611 1 76 0.00208093 143 0 5.60133e+07 0.0264985 288245 5.64025e+07 6.13354e+06 21631 2.78669e+07 0 0.176357 0.993101 0.791452 5.60133e+07 0.00329681 1.22332e+07 6.07691e+06 1.23007e+07 140 1.22819e+07 9.1439e+06 0.00268756 1.23694e+07 50.1774 0.0051105 0.995249 0 50.1376 GTEX-11EQ9-2526-SM-5HL66 0 B1 2 pieces~10% fibrous tissue/fascia 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 321 378 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990979 234779 0.975536 0.993133 0.820009 22015 1 76 0.00204302 140 0 6.6415e+07 0.0241771 445308 6.68742e+07 6.9291e+06 22030 3.30585e+07 0 0.155526 0.993133 0.814379 6.6415e+07 0.00310172 1.45156e+07 7.04233e+06 1.46326e+07 164 1.45971e+07 1.09626e+07 0.00257122 1.469e+07 50.1587 0.00665889 0.995288 0 50.2006 GTEX-11GS4-0004-SM-58Q7W B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GS4-0004-SM-5DWSQ B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11GS4-0004-SM-6WBTL B1 Blood Whole Blood 0013756 675 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056,LCSET-6242 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GS4-0006-SM-5SI9M B1 8.9 Blood Whole Blood 0013756 675 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.9801 737127 0.966407 0.983258 0.76259 20033 1 76 0.00212827 126 0 8.84255e+07 0.0329036 235687 8.99311e+07 9.71236e+06 20050 4.39466e+07 0 0.203817 0.983258 0.749823 8.84255e+07 0.00363036 2.01101e+07 9.62757e+07 2.03334e+07 152 2.0385e+07 2.00964e+07 0.0028769 2.03666e+07 49.9775 0.00262075 0.986417 0 50.276 GTEX-11GS4-0008-SM-5QGRA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 915 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994128 281837 0.980108 0.995257 0.8711 19388 1 76 0.00161726 151 0 6.86961e+07 0.0195252 318745 6.90235e+07 4.78362e+06 19398 3.42426e+07 0 0.109008 0.995257 0.866968 6.86961e+07 0.00237818 1.54363e+07 8.11204e+06 1.5495e+07 150 1.54806e+07 1.76693e+07 0.00199729 1.55352e+07 50.0879 0.00461792 0.996385 0 50.0949 GTEX-11GS4-0011-R10a-SM-AHZ7I B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 689 ChIP-Seq GTEX-11GS4-0011-R1a-SM-DO129 B1, A1 6.1 Brain Brain - Hippocampus 0001954 689 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987983 494262 0.962539 0.992192 0.844377 23307 1 76 0.0026886 266 0 8.22006e+07 0.0372549 6.44182e+06 8.28475e+07 7.98926e+06 23326 4.08358e+07 0 0.118163 0.992192 0.837784 8.22006e+07 0.00505942 1.77998e+07 1.88594e+07 1.81551e+07 306 1.81939e+07 6.29268e+06 0.00386898 1.80475e+07 49.7979 0.0777552 0.996402 0 50.4942 GTEX-11GS4-0011-R2a-SM-DO942 B1, A1 7.8 Brain Brain - Substantia nigra 0002038 689 BP-42276 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994404 410008 0.958364 0.994929 0.840858 23326 1 76 0.00217768 273 0 8.19496e+07 0.041453 8.37187e+06 8.23672e+07 5.02982e+06 23351 4.08432e+07 0 0.117506 0.994929 0.836594 8.19496e+07 0.00251348 1.79285e+07 1.15768e+07 1.83827e+07 322 1.81282e+07 8.79274e+06 0.00234549 1.82189e+07 50.1247 0.101641 0.995455 0 50.6254 GTEX-11GS4-0226-SM-5HL77 1 B1 6 pieces, well trimmed with minimal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 785 659 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990234 248205 0.970673 0.992274 0.737393 23390 1 76 0.0023387 152 0 6.79652e+07 0.0290974 268433 6.84944e+07 7.15033e+06 23419 3.3825e+07 0 0.23328 0.992274 0.731696 6.79652e+07 0.00339208 1.48437e+07 7.85666e+06 1.4967e+07 149 1.49669e+07 1.01713e+07 0.00286431 1.49749e+07 50.0134 0.00391905 0.994314 0 50.2068 GTEX-11GS4-0326-SM-5N9F7 1 B1 6 pieces 5.7 Blood Vessel Artery - Aorta 0001496 795 649 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984091 298981 0.966967 0.985169 0.72645 24167 1 76 0.00440796 160 0 8.62556e+07 0.032649 396669 8.75541e+07 4.77303e+06 24202 4.27428e+07 0 0.240516 0.985169 0.715676 8.62556e+07 0.00460399 1.86819e+07 9.7513e+06 1.87237e+07 175 1.86833e+07 1.25364e+07 0.00450587 1.88204e+07 50.1829 0.00453056 0.986246 0 50.0559 GTEX-11GS4-0426-SM-5N9CD 1 B1 2 pieces, some interstitial fibrosis, one piece is 20% fat, second is 40% fat/fibrous 6.5 Heart Heart - Atrial Appendage 0006631 796 648 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991481 146324 0.979374 0.992349 0.828739 21493 1 76 0.003157 151 0 6.56615e+07 0.0204701 2.36585e+06 6.61678e+07 2.87433e+06 21509 3.27175e+07 0 0.150635 0.992349 0.822399 6.56615e+07 0.00361446 1.42795e+07 1.51029e+07 1.43416e+07 179 1.42787e+07 7.09215e+06 0.00338553 1.43996e+07 50.2108 0.0357553 0.993216 0 50.1085 GTEX-11GS4-0526-SM-5A5KQ 1 B1 2 pieces 6.6 Heart Heart - Left Ventricle 0006566 798 646 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.986584 185868 0.985783 0.989221 0.827076 20696 1 76 0.00261461 266 0 7.78754e+07 0.0140932 3.41631e+06 7.87239e+07 9.05384e+06 20707 3.87615e+07 0 0.158707 0.989221 0.818161 7.78754e+07 0.00478885 1.72327e+07 3.40337e+07 1.68869e+07 264 1.68716e+07 6.96923e+06 0.00369884 1.74078e+07 50.7821 0.0433961 0.991857 0 49.4932 GTEX-11GS4-0626-SM-5A5LC 1 B1 2 pieces, atherosclerosis with narrowing of the lumen by 50%, attached portion of fat up to 3.2x1mm 6 Blood Vessel Artery - Coronary 0001621 803 641 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988814 226683 0.96915 0.991389 0.787866 23444 1 76 0.00219092 142 0 7.15054e+07 0.0305277 282499 7.21265e+07 8.09533e+06 23468 3.55459e+07 0 0.181284 0.991389 0.781082 7.15054e+07 0.00436626 1.52307e+07 8.83433e+06 1.54317e+07 165 1.54004e+07 1.19364e+07 0.00327577 1.54412e+07 50.0661 0.00391672 0.993965 0 50.3278 GTEX-11GS4-0826-SM-5986J 2 B1 2 pieces, one piece is ~30% fat/fibrous tissue, few collections of lymphocytes 7 Thyroid Thyroid 0002046 807 637 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983729 265935 0.967446 0.988898 0.738494 24471 1 76 0.0028749 134 0 7.25004e+07 0.0322106 177776 7.33143e+07 1.73845e+07 24508 3.59672e+07 0 0.228952 0.988898 0.730295 7.25004e+07 0.00639421 1.58488e+07 8.70007e+06 1.5921e+07 142 1.60614e+07 1.16029e+07 0.00462536 1.60602e+07 49.9981 0.00242485 0.994067 0 50.1137 GTEX-11GS4-1026-SM-5N9DE 1 B1 2 pieces 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 812 632 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98841 194218 0.971638 0.989133 0.751136 23657 1 76 0.00314395 165 0 8.13552e+07 0.0280667 542669 8.2249e+07 3.96204e+06 23690 4.04658e+07 0 0.220503 0.989133 0.742973 8.13552e+07 0.00361853 1.78564e+07 1.04198e+07 1.79119e+07 197 1.78324e+07 1.0505e+07 0.00338107 1.79971e+07 50.2298 0.00659788 0.989857 0 50.0776 GTEX-11GS4-1426-SM-5N9D2 1 B1 6 pieces, well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 829 615 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.988077 192934 0.972822 0.989628 0.835103 22236 1 76 0.00330338 199 0 7.56107e+07 0.027023 2.75243e+06 7.64031e+07 4.02743e+06 22251 3.75937e+07 0 0.137719 0.989628 0.826441 7.56107e+07 0.00394062 1.65529e+07 1.00724e+07 1.67161e+07 222 1.65666e+07 7.74029e+06 0.0036215 1.68139e+07 50.3704 0.0360251 0.991179 0 50.2453 GTEX-11GS4-1826-SM-5HL4T 2 B1 6 pieces, predominantly muscularis with some residual autolyzed mucosa (marked) 6.6 Colon Colon - Sigmoid 0001159 840 604 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990831 206889 0.970632 0.99288 0.817035 22824 1 76 0.00219486 162 0 7.16353e+07 0.0291121 536436 7.2149e+07 7.88535e+06 22850 3.56525e+07 0 0.153597 0.99288 0.811218 7.16353e+07 0.00323591 1.52868e+07 6.68186e+06 1.54743e+07 178 1.54286e+07 1.13099e+07 0.00271431 1.54721e+07 50.0704 0.00743511 0.99493 0 50.3049 GTEX-11GS4-2026-SM-5N9CP 1 B1 2 pieces, active spermatogenesis 7.2 Testis Testis 0000473 846 598 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990866 205643 0.924799 0.991987 0.710052 32240 1 76 0.00288224 135 0 6.69554e+07 0.0748891 381363 6.74963e+07 3.02732e+06 32298 3.33511e+07 0 0.214747 0.991987 0.704362 6.69554e+07 0.00341805 1.38394e+07 8.66837e+06 1.38619e+07 128 1.38738e+07 1.10306e+07 0.00314984 1.38955e+07 50.0391 0.00565013 0.993108 0 50.0407 GTEX-11GS4-2126-SM-5A5KR 1 B1 2 pieces, gynecomastoid change, pacinian corpuscles, 30% fat 6.4 Breast Breast - Mammary Tissue 0008367 848 596 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989835 184936 0.968408 0.992069 0.71482 25542 1 76 0.00231415 145 0 7.63494e+07 0.0312515 241410 7.69598e+07 9.14972e+06 25593 3.7999e+07 0 0.253588 0.992069 0.70915 7.63494e+07 0.00404081 1.67539e+07 8.13364e+06 1.68948e+07 163 1.69303e+07 1.11615e+07 0.00317554 1.68763e+07 49.9202 0.00313683 0.994302 0 50.2095 GTEX-11GS4-2326-SM-5A5KS 2 B1 6 pieces, glomeruli in all sections, arteriosclerosis 6.1 Kidney Kidney - Cortex 0001225 910 534 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987577 360100 0.975553 0.990966 0.816263 24752 1 76 0.00256122 370 0 1.14815e+08 0.0242399 5.35177e+06 1.15861e+08 1.48438e+07 24780 5.70969e+07 0 0.159291 0.990966 0.808888 1.14815e+08 0.00450856 2.52692e+07 2.77066e+07 2.55517e+07 343 2.5525e+07 1.1899e+07 0.00353156 2.56428e+07 50.1151 0.0461911 0.994354 0 50.2779 GTEX-11GS4-2526-SM-5A5KT 1 B1 2 pieces, one piece includes ~10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 913 531 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990357 206165 0.98529 0.99333 0.875609 19111 1 76 0.00205443 151 0 7.36781e+07 0.014539 942574 7.41728e+07 8.94107e+06 19118 3.66695e+07 0 0.109681 0.99333 0.869769 7.36781e+07 0.00392238 1.61326e+07 1.29902e+07 1.61788e+07 202 1.61268e+07 1.37968e+07 0.00298561 1.6369e+07 50.3727 0.0127078 0.996304 0 50.0715 GTEX-11GS4-2526-SM-CYKV3 1 B1 2 pieces, one piece includes ~10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 913 531 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 RIP-Seq GTEX-11GS4-2626-SM-5A5LD 1 B1 2 pieces, includes small portion of nerve, detached fragment of skeletal muscle abuts one piece of fat 7 Adipose Tissue Adipose - Subcutaneous 0002190 913 531 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98966 269885 0.971819 0.992777 0.784692 23567 1 76 0.00219191 159 0 7.36339e+07 0.0278633 401343 7.41696e+07 8.47214e+06 23605 3.66148e+07 0 0.187128 0.992777 0.779024 7.36339e+07 0.0042925 1.60772e+07 8.44691e+06 1.62129e+07 172 1.6245e+07 1.15711e+07 0.00323891 1.62626e+07 50.0271 0.00541115 0.995894 0 50.21 GTEX-11GS4-2726-SM-5A5LE 0 B1 6 pieces, relatively well trimmed and with minimal internal fat, squamous epithelium measures 38-43 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 915 529 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990327 302265 0.97363 0.993146 0.81708 23850 1 76 0.00215559 191 0 7.75986e+07 0.0261065 455348 7.81341e+07 8.37887e+06 23876 3.85982e+07 0 0.15655 0.993146 0.81148 7.75986e+07 0.00426134 1.69497e+07 9.01946e+06 1.70594e+07 189 1.70651e+07 1.3509e+07 0.00320548 1.71501e+07 50.1243 0.00582777 0.995965 0 50.1613 GTEX-11GS4-2826-SM-5HL56 1 B1 3 pieces, each includes about 50% internal and attached fat 7.3 Nerve Nerve - Tibial 0001323 917 527 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989596 272756 0.968528 0.992358 0.758233 23813 1 76 0.00218792 131 0 6.5423e+07 0.0312185 170330 6.59268e+07 6.99613e+06 23848 3.25227e+07 0 0.210295 0.992358 0.752438 6.5423e+07 0.00348211 1.45496e+07 9.90065e+06 1.46674e+07 130 1.46703e+07 1.26246e+07 0.00283321 1.47223e+07 50.0884 0.00258362 0.995118 0 50.2017 GTEX-11GS4-2926-SM-5A5LF 1 B1 3 pieces, atherosclerosis with narrowing of the lumen by ~50%, medial calcification 7.6 Blood Vessel Artery - Tibial 0007610 919 525 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989376 233352 0.972343 0.992165 0.810312 22990 1 76 0.0021755 208 0 8.27071e+07 0.0272855 263103 8.33602e+07 1.10439e+07 23012 4.11378e+07 0 0.162031 0.992165 0.803964 8.27071e+07 0.0039553 1.77228e+07 8.07513e+06 1.79248e+07 213 1.79467e+07 1.54217e+07 0.0030629 1.79152e+07 49.9561 0.00315622 0.994954 0 50.2834 GTEX-11GS4-3026-SM-5A5LG 1 B1 2 pieces, adenohypophysis and neurohypophysis with small portion of pars intermedia 7.1 Pituitary Pituitary 0000007 954 490 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991273 266970 0.961456 0.993363 0.770862 24674 1 76 0.00219497 130 0 6.7629e+07 0.0382929 289061 6.80809e+07 8.00988e+06 24707 3.36697e+07 0 0.190595 0.993363 0.765745 6.7629e+07 0.00395608 1.29362e+07 9.1553e+06 1.30617e+07 150 1.30866e+07 1.1188e+07 0.00307367 1.30374e+07 49.9058 0.00424585 0.995453 0 50.2414 GTEX-11GS4-3126-SM-5A5LH 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cortex 0001870 959 485 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990544 193596 0.96846 0.99283 0.828011 23109 1 76 0.00229743 198 0 6.91737e+07 0.0312655 2.78179e+06 6.96733e+07 8.15524e+06 23122 3.4442e+07 0 0.140449 0.99283 0.822074 6.91737e+07 0.0041662 1.52632e+07 1.07575e+07 1.53085e+07 222 1.52291e+07 7.51656e+06 0.00322966 1.5484e+07 50.415 0.0399262 0.995115 0 50.0742 GTEX-11GSO-0003-SM-58Q84 B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GSO-0003-SM-5DWSW B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11GSO-0003-SM-6WBTR B1 Blood Whole Blood 0013756 779 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GSO-0005-SM-5O9CA B1 7.2 Blood Whole Blood 0013756 779 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.968099 545883 0.980828 0.971004 0.812295 19099 1 76 0.00407836 156 0 1.18879e+08 0.0182169 590040 1.22429e+08 5.5945e+06 19104 5.90262e+07 0 0.168533 0.971004 0.788742 1.18879e+08 0.00558293 2.73354e+07 1.52596e+08 2.80582e+07 182 2.80621e+07 3.06392e+07 0.00482839 2.77049e+07 49.6797 0.00481945 0.973909 0 50.6523 GTEX-11GSO-0011-R10a-SM-AHZ7H B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 829 ChIP-Seq GTEX-11GSO-0011-R1b-SM-57WD3 B1, A1 7.3 Brain Brain - Hippocampus 0001954 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987643 604658 0.961807 0.991835 0.822878 23563 1 76 0.00182538 269 0 8.18267e+07 0.0379222 6.86257e+06 8.25003e+07 1.073e+07 23587 4.0648e+07 0 0.138928 0.991835 0.81616 8.18267e+07 0.00434936 1.79525e+07 2.22288e+07 1.80439e+07 312 1.79295e+07 7.93805e+06 0.00308204 1.83638e+07 50.5983 0.0831824 0.996027 0 50.127 GTEX-11GSO-0011-R2a-SM-57WDF B1, A1 6.6 Brain Brain - Substantia nigra 0002038 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990658 643824 0.962148 0.993271 0.831833 23065 1 76 0.00175858 372 0 8.25946e+07 0.0376251 7.35002e+06 8.31541e+07 1.00288e+07 23081 4.10955e+07 0 0.130315 0.993271 0.826236 8.25946e+07 0.00347582 1.81043e+07 2.66924e+07 1.81934e+07 337 1.79263e+07 7.39139e+06 0.00261494 1.85633e+07 50.8728 0.0883903 0.995883 0 50.1228 GTEX-11GSO-0011-R3b-SM-57WB2 B1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 829 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.992555 692510 0.957305 0.994576 0.843903 23154 1 76 0.00177835 269 0 7.64378e+07 0.0422836 3.53733e+06 7.68547e+07 8.58649e+06 23165 3.80558e+07 0 0.113402 0.994576 0.839326 7.64378e+07 0.00332819 1.67107e+07 1.86067e+07 1.67117e+07 276 1.66805e+07 9.37056e+06 0.0025517 1.68861e+07 50.3063 0.0460262 0.996597 0 50.0014 GTEX-11GSO-0226-SM-5A5LV 1 B1 2 pieces, few large vessels 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 809 740 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987608 289269 0.973229 0.991164 0.801422 22910 1 76 0.00208242 137 0 6.41762e+07 0.0264607 261088 6.47484e+07 8.0583e+06 22931 3.18918e+07 0 0.171807 0.991164 0.794341 6.41762e+07 0.00449217 1.40004e+07 8.82537e+06 1.41763e+07 152 1.42107e+07 1.08441e+07 0.00328297 1.4186e+07 49.9565 0.00403235 0.99472 0 50.3122 GTEX-11GSO-0626-SM-5A5LW 2 B1 2 pieces, multinodular hyperplasia 7.2 Thyroid Thyroid 0002046 823 726 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989122 296913 0.962148 0.991688 0.813626 22084 1 76 0.00193493 141 0 6.42327e+07 0.0374954 138239 6.47710e+07 7.52059e+06 22110 3.1956e+07 0 0.148522 0.991688 0.806864 6.42327e+07 0.00366415 1.3922e+07 9.99058e+06 1.41449e+07 146 1.41735e+07 1.2521e+07 0.0027973 1.40506e+07 49.7822 0.00213427 0.994254 0 50.3971 GTEX-11GSO-1926-SM-5A5K3 1 B1 2 pieces, entirely fat 5.8 Breast Breast - Mammary Tissue 0008367 855 694 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987767 240422 0.972577 0.990675 0.78465 25156 1 76 0.00213586 162 0 7.14307e+07 0.0271201 510604 7.21031e+07 8.86229e+06 25185 3.55209e+07 0 0.187927 0.990675 0.777333 7.14307e+07 0.00419814 1.56682e+07 9.56954e+06 1.583e+07 176 1.58344e+07 1.06141e+07 0.00316397 1.58592e+07 50.0391 0.00708158 0.993582 0 50.2569 GTEX-11GSO-2326-SM-5A5LX 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 968 581 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98963 257586 0.971437 0.992458 0.770531 23065 1 76 0.00212257 139 0 6.64351e+07 0.0282783 239091 6.694e+07 7.87526e+06 23094 3.30453e+07 0 0.200906 0.992458 0.76472 6.64351e+07 0.00409252 1.45297e+07 7.95257e+06 1.46741e+07 148 1.47066e+07 1.11876e+07 0.00310474 1.46714e+07 49.9402 0.00357172 0.995286 0 50.2471 GTEX-11GSO-2426-SM-5A5LY 1 B1 6 pieces, relatively well trimmed with <10% attached/internal fat, squamous epithelium measures 26 to 30 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 969 580 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989134 240269 0.966796 0.991879 0.729958 23452 1 76 0.00217091 153 0 6.75959e+07 0.0330016 250447 6.81494e+07 8.42786e+06 23485 3.36206e+07 0 0.236838 0.991879 0.72403 6.75959e+07 0.0040698 1.4732e+07 8.66946e+06 1.48814e+07 148 1.49099e+07 1.00922e+07 0.00311773 1.48786e+07 49.9474 0.00367497 0.994623 0 50.2524 GTEX-11GSO-2526-SM-5PNVX 1 B1 2 pieces, 10% internal fat, small portion of attached tendon 8.6 Muscle Muscle - Skeletal 0011907 971 578 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.994161 192313 0.980575 0.995541 0.865517 18490 1 76 0.00166229 127 0 5.90858e+07 0.0191843 712630 5.93504e+07 5.24035e+06 18495 2.94486e+07 0 0.115058 0.995541 0.861658 5.90858e+07 0.00259341 1.28664e+07 7.28101e+06 1.28582e+07 144 1.28292e+07 1.18744e+07 0.00212721 1.29718e+07 50.2762 0.0120072 0.996922 0 49.9842 GTEX-11GSO-2526-SM-CYKO1 1 B1 2 pieces, 10% internal fat, small portion of attached tendon 8.6 Muscle Muscle - Skeletal 0011907 971 578 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-11GSO-2626-SM-5Q5AK 1 B1 2 pieces, 50-60% is internal and attached fat 6.9 Nerve Nerve - Tibial 0001323 972 577 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990714 136122 0.964998 0.992491 0.734125 23262 1 76 0.00196565 135 0 5.96372e+07 0.0347054 149384 6.00884e+07 4.42708e+06 23290 2.96756e+07 0 0.230874 0.992491 0.728612 5.96372e+07 0.00289697 1.30893e+07 5.45897e+06 1.31729e+07 132 1.31541e+07 9.35644e+06 0.00243048 1.32111e+07 50.1081 0.00248607 0.994268 0 50.1591 GTEX-11GSO-2826-SM-5HL6Q 1 B1 2 pieces, adenophypophysis and neurohypophysis 6 Pituitary Pituitary 0000007 1036 513 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990018 216720 0.963758 0.992194 0.753936 24479 1 76 0.00220541 120 0 5.65404e+07 0.0358751 478107 5.69852e+07 6.18454e+06 24505 2.81216e+07 0 0.209822 0.992194 0.74805 5.65404e+07 0.00318517 1.22714e+07 6.25152e+06 1.23266e+07 137 1.23106e+07 7.71892e+06 0.00269422 1.24068e+07 50.1946 0.00839001 0.994369 0 50.1122 GTEX-11GSO-2926-SM-5HL73 1 B1 2 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1037 512 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991016 311435 0.96189 0.993522 0.821453 22994 1 76 0.00199775 153 0 6.10967e+07 0.0377495 2.36278e+06 6.14951e+07 6.98716e+06 23006 3.04039e+07 0 0.140437 0.993522 0.816132 6.10967e+07 0.00288622 1.33208e+07 1.35801e+07 1.34533e+07 174 1.34216e+07 7.41143e+06 0.00244087 1.34956e+07 50.1375 0.0384222 0.996027 0 50.2476 GTEX-11GSO-2926-SM-CYKQT 1 B1 2 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1037 512 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11GSO-3026-SM-5Q5AL 1 B1 2 pieces, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 1040 509 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988081 301575 0.951586 0.991404 0.750844 23681 1 76 0.00193739 202 0 7.96641e+07 0.0480471 1.34746e+06 8.03549e+07 6.36946e+06 23707 3.95811e+07 0 0.200742 0.991404 0.74439 7.96641e+07 0.00317494 1.7239e+07 1.12045e+07 1.74233e+07 212 1.74426e+07 9.78848e+06 0.00255409 1.74641e+07 50.0308 0.0167688 0.994728 0 50.2658 GTEX-11GSP-0004-SM-58Q83 B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11GSP-0004-SM-5DWSV B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11GSP-0004-SM-6WBTQ B1 Blood Whole Blood 0013756 705 BP-39412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/28/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11GSP-0006-SM-5N9EL B1 8.8 Blood Whole Blood 0013756 705 BP-39427 RNA isolation_PAXgene Blood RNA (Manual) 05/28/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.968893 478859 0.982668 0.970507 0.800583 19342 1 76 0.00436491 150 0 1.08491e+08 0.0166774 273383 1.11788e+08 5.68429e+06 19352 5.39468e+07 0 0.182085 0.970507 0.776972 1.08491e+08 0.00436862 2.52511e+07 1.3596e+08 2.57395e+07 196 2.57377e+07 2.82623e+07 0.00436676 2.5435e+07 49.7043 0.00244555 0.972121 0 50.479 GTEX-11GSP-0008-SM-5Q5DM B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 920 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993072 523477 0.975757 0.995043 0.865027 20367 1 76 0.00178701 227 0 8.5948e+07 0.0238552 284686 8.63762e+07 1.19966e+07 20382 4.28093e+07 0 0.11073 0.995043 0.860738 8.5948e+07 0.00305089 1.93119e+07 1.60373e+07 1.9385e+07 204 1.94049e+07 2.30564e+07 0.0024177 1.94655e+07 50.0779 0.00329588 0.997013 0 50.0945 GTEX-11GSP-0011-R10a-SM-5NQ7J B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.99294 319857 0.966254 0.994312 0.831085 23068 1 76 0.00210049 266 0 7.81243e+07 0.0334816 7.63803e+06 7.85712e+07 5.79778e+06 23085 3.8924e+07 0 0.135169 0.994312 0.826358 7.81243e+07 0.00299891 1.70179e+07 2.16267e+07 1.73615e+07 297 1.7154e+07 7.44973e+06 0.00254908 1.73151e+07 50.2336 0.0972115 0.995684 0 50.4997 GTEX-11GSP-0011-R11b-SM-5NQ7V B1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990732 236082 0.950276 0.992395 0.720905 22723 1 76 0.00234203 112 0 5.92404e+07 0.0492689 941510 5.96944e+07 4.7336e+06 22743 2.94783e+07 0 0.229372 0.992395 0.715422 5.92404e+07 0.00321541 1.28037e+07 8.39909e+06 1.29456e+07 135 1.29549e+07 7.43255e+06 0.00277799 1.28871e+07 49.869 0.0157722 0.994058 0 50.2756 GTEX-11GSP-0011-R1a-SM-9QEJ3 B1, A1 6.7 Brain Brain - Hippocampus 0001954 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991406 312699 0.96344 0.994156 0.823411 23572 1 76 0.00189587 267 0 9.29775e+07 0.036354 8.1664e+06 9.3524e+07 4.43817e+06 23596 4.62794e+07 0 0.140029 0.994156 0.8186 9.29775e+07 0.00386478 2.01403e+07 2.1452e+07 2.06088e+07 322 2.0426e+07 7.34733e+06 0.0028776 2.05211e+07 50.1162 0.0873188 0.996906 0 50.5748 GTEX-11GSP-0011-R2b-SM-9QEGE B1, A1 7 Brain Brain - Substantia nigra 0002038 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990437 431205 0.96561 0.993497 0.84575 23757 1 76 0.00185071 272 0 8.66014e+07 0.0340802 7.0319e+06 8.71683e+07 4.22903e+06 23774 4.30825e+07 0 0.11986 0.993497 0.84025 8.66014e+07 0.00385759 1.90419e+07 1.50655e+07 1.93774e+07 308 1.93525e+07 1.08654e+07 0.00285106 1.92995e+07 49.9315 0.0806703 0.996557 0 50.4367 GTEX-11GSP-0011-R3a-SM-9QEGF B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 711 BP-42441 RNA isolation_PAXgene Tissue miRNA 08/19/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990769 500274 0.961794 0.993737 0.843523 22044 1 76 0.00193999 266 0 7.94249e+07 0.0379749 8.80142e+06 7.99255e+07 4.0732e+06 22059 3.95226e+07 0 0.118271 0.993737 0.83824 7.94249e+07 0.00398654 1.72023e+07 2.54047e+07 1.77359e+07 316 1.75626e+07 6.72272e+06 0.00296021 1.75601e+07 49.9964 0.11012 0.996706 0 50.7638 GTEX-11GSP-0011-R5a-SM-57WBE B1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991578 416488 0.959461 0.993688 0.808175 23693 1 76 0.00202779 154 0 6.4487e+07 0.04016 3.38413e+06 6.48966e+07 7.40512e+06 23716 3.2095e+07 0 0.151286 0.993688 0.803074 6.4487e+07 0.00359213 1.41256e+07 1.36683e+07 1.41364e+07 177 1.41168e+07 7.6494e+06 0.0028083 1.42671e+07 50.2648 0.0521465 0.995797 0 50.0191 GTEX-11GSP-0011-R6b-SM-57WBQ B1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990653 606137 0.9665 0.993291 0.839029 24608 1 76 0.00204819 373 0 1.10273e+08 0.0332094 1.06966e+07 1.11018e+08 1.29771e+07 24635 5.48621e+07 0 0.127471 0.993291 0.8334 1.10273e+08 0.00400389 2.43829e+07 2.81006e+07 2.43932e+07 357 2.42462e+07 1.18203e+07 0.00302344 2.47764e+07 50.5407 0.0963505 0.995928 0 50.0106 GTEX-11GSP-0011-R7b-SM-57WC3 B1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 711 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991065 443029 0.961254 0.993458 0.823489 23753 1 76 0.00202741 268 0 7.74428e+07 0.0384189 5.16448e+06 7.79528e+07 9.30404e+06 23771 3.85397e+07 0 0.137764 0.993458 0.818102 7.74428e+07 0.00381539 1.70073e+07 1.81278e+07 1.70028e+07 268 1.69367e+07 8.50837e+06 0.00291925 1.72426e+07 50.4474 0.0662514 0.995851 0 49.9934 GTEX-11GSP-0011-R8b-SM-5NQ79 B1, A1 6.5 Brain Brain - Hypothalamus 0001898 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991256 379997 0.962817 0.992795 0.813583 24827 1 76 0.00215773 376 0 8.99466e+07 0.0369307 7.10641e+06 9.05994e+07 6.82327e+06 24857 4.47755e+07 0 0.149234 0.992795 0.80772 8.99466e+07 0.00308672 1.95527e+07 2.43345e+07 1.99529e+07 331 1.95865e+07 9.11537e+06 0.00262151 2.00383e+07 50.5701 0.0784377 0.994333 0 50.5065 GTEX-11GSP-0011-R9b-SM-5NQ77 B1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 711 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992833 331288 0.959634 0.993882 0.82277 23555 1 76 0.00208564 280 0 7.67943e+07 0.0400855 5.42422e+06 7.72671e+07 5.28967e+06 23575 3.82649e+07 0 0.136864 0.993882 0.817736 7.67943e+07 0.00285825 1.6731e+07 1.59111e+07 1.71851e+07 286 1.69298e+07 7.64916e+06 0.00247154 1.70541e+07 50.1828 0.070201 0.99493 0 50.6696 GTEX-11GSP-0126-SM-5A5KU 0 B1 2 pieces; Hashimoto thyroiditis, moderate; 40% fibrovascular and adipose tissue. 6.8 Thyroid Thyroid 0002046 761 575 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987432 302220 0.969167 0.990698 0.733751 24952 1 76 0.00260843 162 0 8.18671e+07 0.0295571 486270 8.26358e+07 1.09869e+07 24990 4.06493e+07 0 0.235416 0.990698 0.726925 8.18671e+07 0.00456979 1.79117e+07 1.1931e+07 1.81252e+07 181 1.81895e+07 1.17322e+07 0.00358588 1.80973e+07 49.8728 0.00588449 0.993963 0 50.2962 GTEX-11GSP-0226-SM-5A5KV 0 B1 2 pieces: 1 atrophic with 30% fibrosis; other piece is all fibrovascular and adipose, no ovary 7.5 Ovary Ovary 0000992 764 572 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990197 242130 0.968136 0.99243 0.755469 22746 1 76 0.00204554 140 0 6.61618e+07 0.0315397 62402 6.66664e+07 7.58579e+06 22779 3.29279e+07 0 0.212667 0.99243 0.74975 6.61618e+07 0.00367809 1.45118e+07 8.06590e+06 1.46993e+07 139 1.47276e+07 1.25501e+07 0.00285998 1.46232e+07 49.8222 0.000936033 0.994663 0 50.3209 GTEX-11GSP-0326-SM-5A5KW 2 B1 2 pieces 6.1 Adrenal Gland Adrenal Gland 0002369 765 571 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991195 282153 0.974147 0.993652 0.799837 21561 1 76 0.00215331 156 0 7.05814e+07 0.0256299 2.85066e+06 7.10323e+07 8.90819e+06 21585 3.51335e+07 0 0.17431 0.993652 0.79476 7.05814e+07 0.00403876 1.55443e+07 1.23773e+07 1.57248e+07 186 1.57307e+07 8.97075e+06 0.00309371 1.56984e+07 49.9486 0.0401318 0.996109 0 50.2886 GTEX-11GSP-0426-SM-5A5KX 2 B1 2 pieces; ducts have PanIN 1 changes 6.9 Pancreas Pancreas 0001150 768 568 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990741 210993 0.986571 0.993064 0.86525 19526 1 76 0.00228684 80 0 7.6707e+07 0.0128174 184779 7.72427e+07 1.00754e+07 19537 3.81793e+07 0 0.121321 0.993064 0.859249 7.6707e+07 0.00411036 1.79637e+07 3.26021e+07 1.81831e+07 104 1.81443e+07 2.69565e+07 0.00319647 1.81773e+07 50.0454 0.00239219 0.995387 0 50.3036 GTEX-11GSP-0626-SM-5986T 1 B1 2 pieces; central vascular congestion 6.2 Liver Liver 0001114 771 565 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984022 168199 0.979374 0.988744 0.783102 21271 1 76 0.00285986 119 0 6.67225e+07 0.0204919 1.69154e+06 6.74821e+07 1.42022e+07 21286 3.31347e+07 0 0.196273 0.988744 0.774287 6.67225e+07 0.00680061 1.49251e+07 1.18945e+07 1.45987e+07 159 1.46353e+07 7.03029e+06 0.00482083 1.51586e+07 50.8783 0.0250665 0.993465 0 49.4474 GTEX-11GSP-0726-SM-5986L 2 B1 2 pieces; acute and chronic vascular congestion; pulmonary edema 6.9 Lung Lung 0008952 773 563 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982971 242112 0.975275 0.987294 0.762549 23438 1 76 0.00295615 134 0 7.14691e+07 0.0243841 212131 7.23889e+07 1.5685e+07 23465 3.54894e+07 0 0.212726 0.987294 0.75286 7.14691e+07 0.00638112 1.57931e+07 8.50484e+06 1.58739e+07 149 1.59691e+07 1.11338e+07 0.00466114 1.59927e+07 50.0368 0.00293044 0.991618 0 50.1276 GTEX-11GSP-0926-SM-9WYSG 1 B1 2 pieces; ductal and lobular units; some sclerosed lobules 7.5 Breast Breast - Mammary Tissue 0008367 775 561 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993285 244281 0.974062 0.994677 0.789633 25138 1 76 0.00236153 280 0 1.00748e+08 0.0256063 603645 1.01287e+08 6.32338e+06 25174 5.01924e+07 0 0.184429 0.994677 0.78543 1.00748e+08 0.00456207 2.21912e+07 9.56002e+06 2.24109e+07 279 2.24007e+07 1.74374e+07 0.00346026 2.23337e+07 49.9251 0.00595973 0.996069 0 50.2463 GTEX-11GSP-1026-SM-9WYSH 0 B1 2 pieces 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 778 558 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992829 216241 0.975151 0.994096 0.799152 24093 1 76 0.00253971 376 0 1.04553e+08 0.0245686 1.59636e+06 1.05174e+08 7.24712e+06 24123 5.2072e+07 0 0.175999 0.994096 0.794434 1.04553e+08 0.00452468 2.30839e+07 1.16005e+07 2.33204e+07 353 2.32832e+07 1.55562e+07 0.00353093 2.32562e+07 49.9709 0.0151782 0.995363 0 50.2549 GTEX-11GSP-1126-SM-5A5LM 1 B1 6 pieces; well trimmed 7.3 Blood Vessel Artery - Aorta 0001496 777 559 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.99024 148170 0.97627 0.993059 0.807297 21264 1 76 0.0020321 135 0 6.17102e+07 0.0233189 169147 6.21415e+07 7.16974e+06 21281 3.0691e+07 0 0.168973 0.993059 0.801694 6.17102e+07 0.00386213 1.32251e+07 5.50418e+06 1.34145e+07 142 1.34385e+07 1.14326e+07 0.00294452 1.33664e+07 49.8654 0.00272196 0.995879 0 50.3555 GTEX-11GSP-1226-SM-5985M 1 B1 2 pieces; 1 has 60% fat, other has 30% fibroadipose tissue 7.9 Heart Heart - Atrial Appendage 0006631 779 557 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.969309 261045 0.979173 0.973993 0.794175 22063 1 76 0.00261376 153 0 7.72346e+07 0.0205369 1.4432e+06 7.92969e+07 1.66122e+07 22088 3.83457e+07 0 0.184998 0.973993 0.773521 7.72346e+07 0.00638207 1.6229e+07 1.08369e+07 1.60061e+07 173 1.60012e+07 1.20415e+07 0.00448885 1.65523e+07 50.8465 0.0182 0.978678 0 49.6543 GTEX-11GSP-1326-SM-5A5KY 1 B1 2 pieces; 1 with patchy scars up to 2 sq mm; hypertrophied fibers 6 Heart Heart - Left Ventricle 0006566 779 557 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989153 146604 0.987171 0.992001 0.847424 19827 1 76 0.00220343 266 0 8.28095e+07 0.0127492 5.37868e+06 8.34772e+07 1.00079e+07 19837 4.12231e+07 0 0.139747 0.992001 0.840646 8.28095e+07 0.0043432 1.8494e+07 3.45301e+07 1.81214e+07 306 1.79917e+07 5.2063e+06 0.00327024 1.88235e+07 51.1298 0.0644329 0.99485 0 49.4912 GTEX-11GSP-1626-SM-5986N 2 B1 5 pieces; mucosa severely autolyzed (not suitable for GTEx); muscularis slightly autolyzed 6.8 Colon Colon - Transverse 0001157 787 549 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983375 276641 0.967957 0.988412 0.7833 23038 1 76 0.00278788 162 0 7.89434e+07 0.0318107 586383 7.98689e+07 1.74192e+07 23059 3.91798e+07 0 0.184657 0.988412 0.774223 7.89434e+07 0.00633173 1.69364e+07 7.81456e+06 1.6994e+07 170 1.7085e+07 1.2449e+07 0.00455077 1.72054e+07 50.1756 0.00734182 0.993448 0 50.0849 GTEX-11GSP-1726-SM-5A5LI 1 B1 6 pieces 6.2 Esophagus Esophagus - Muscularis 0004648 785 551 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990384 241475 0.971899 0.99271 0.783107 22438 1 76 0.00212836 135 0 6.63751e+07 0.0279058 1.14764e+06 6.68625e+07 7.7272e+06 22462 3.3029e+07 0 0.188792 0.99271 0.777398 6.63751e+07 0.00414973 1.45312e+07 6.5121e+06 1.46535e+07 163 1.46314e+07 8.69445e+06 0.00313668 1.46977e+07 50.1131 0.0171641 0.995036 0 50.2095 GTEX-11GSP-1826-SM-5N9DQ 1 B1 6 pieces; well dissected 7.2 Esophagus Esophagus - Mucosa 0006920 786 550 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989987 190840 0.976722 0.991347 0.805786 21906 1 76 0.00284166 159 0 7.78823e+07 0.0230752 739523 7.85621e+07 3.75832e+06 21928 3.87828e+07 0 0.170936 0.991347 0.798814 7.78823e+07 0.0034264 1.74645e+07 8.74184e+06 1.76303e+07 188 1.75845e+07 1.253e+07 0.00313363 1.76162e+07 50.045 0.00941323 0.992708 0 50.2362 GTEX-11GSP-2126-SM-5HL5E 2 B1 7 pieces; well dissected mucosa 6.9 Stomach Stomach 0000945 790 546 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.976992 141999 0.988311 0.979132 0.848766 20540 1 76 0.00206438 335 0 7.19096e+07 0.0110543 550073 7.34422e+07 8.55372e+06 20552 3.5769e+07 0 0.139545 0.979132 0.831054 7.19096e+07 0.0031437 1.66889e+07 1.19396e+08 1.73723e+07 226 1.74003e+07 2.23196e+07 0.00260286 1.68122e+07 49.1405 0.00748987 0.981272 0 51.0031 GTEX-11GSP-2226-SM-5HL5Q 2 B1 6 pieces; mucosa largely sloughed 6.6 Vagina Vagina 0000996 790 546 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989805 200754 0.972033 0.991888 0.708797 23388 1 76 0.00229546 131 0 6.24521e+07 0.0276279 163457 6.29628e+07 7.03074e+06 23422 3.10601e+07 0 0.263235 0.991888 0.703048 6.24521e+07 0.00323416 1.37252e+07 6.27392e+06 1.38107e+07 130 1.3808e+07 9.81252e+06 0.00276382 1.38564e+07 50.0876 0.00259609 0.993972 0 50.1552 GTEX-11GSP-2326-SM-5HL63 0 B1 6 pieces; well dissected 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 799 537 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990578 194031 0.968402 0.992571 0.726421 22975 1 76 0.00226317 136 0 5.86559e+07 0.0314193 258356 5.90949e+07 6.006e+06 23003 2.91898e+07 0 0.241981 0.992571 0.721024 5.86559e+07 0.00330944 1.27959e+07 6.17213e+06 1.28812e+07 132 1.28773e+07 8.2896e+06 0.00278526 1.29118e+07 50.0667 0.00437188 0.994564 0 50.1662 GTEX-11GSP-2426-SM-5N9BD 2 B1 2 pieces 6.5 Uterus Uterus 0000995 802 534 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98903 154253 0.969795 0.989881 0.705506 23979 1 76 0.00306311 171 0 8.98958e+07 0.0299459 248688 9.08148e+07 4.98382e+06 24029 4.47054e+07 0 0.264289 0.989881 0.698367 8.98958e+07 0.0036623 1.97672e+07 8.14777e+06 1.98475e+07 190 1.97638e+07 1.30559e+07 0.00336245 1.99321e+07 50.2121 0.00273841 0.990731 0 50.1013 GTEX-11GSP-2526-SM-5N9BP 1 B1 6 pieces; well dissected 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 920 416 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99049 214494 0.972151 0.991725 0.803246 24201 1 76 0.0028966 187 0 8.18033e+07 0.0275733 341591 8.24859e+07 4.35148e+06 24230 4.0712e+07 0 0.168905 0.991725 0.7966 8.18033e+07 0.00363286 1.77827e+07 7.64599e+06 1.78746e+07 196 1.78096e+07 1.35554e+07 0.00326427 1.7945e+07 50.1893 0.00414121 0.99296 0 50.1288 GTEX-11GSP-2726-SM-5A5LJ 0 B1 2 pieces 8.4 Muscle Muscle - Skeletal 0011907 921 415 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992875 179650 0.984417 0.994761 0.876202 19054 1 76 0.00182769 153 0 6.93543e+07 0.0153783 906483 6.97195e+07 7.98092e+06 19060 3.45556e+07 0 0.108215 0.994761 0.871611 6.93543e+07 0.00344235 1.5146e+07 7.94869e+06 1.51589e+07 166 1.51317e+07 1.44345e+07 0.00263349 1.52949e+07 50.2682 0.0130019 0.996646 0 50.0213 GTEX-11GSP-2826-SM-5A5LK 0 B1 2 pieces; up to 30% internal and external fat 7.4 Nerve Nerve - Tibial 0001323 921 415 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.987977 217946 0.970433 0.991465 0.7596 23170 1 76 0.0021399 136 0 6.09868e+07 0.0292755 209439 6.15118e+07 7.67285e+06 23201 3.03093e+07 0 0.210833 0.991465 0.753117 6.09868e+07 0.00407392 1.33738e+07 5.79225e+06 1.35455e+07 139 1.3591e+07 9.54703e+06 0.00310351 1.35271e+07 49.8821 0.00340486 0.994953 0 50.3189 GTEX-11GSP-2926-SM-5N9C2 1 B1 2 pieces; 1 piece heavily [50%] calcified, other focally; fatty external 'tail' on 1 piece 7.8 Blood Vessel Artery - Tibial 0007610 922 414 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99162 177770 0.976279 0.992637 0.836422 21170 1 76 0.00271882 167 0 7.69919e+07 0.0233739 287058 7.7563e+07 3.99465e+06 21183 3.83216e+07 0 0.139857 0.992637 0.830263 7.69919e+07 0.00338352 1.65009e+07 6.08515e+06 1.65761e+07 182 1.64895e+07 1.46641e+07 0.00305083 1.66673e+07 50.2681 0.00370097 0.993655 0 50.1138 GTEX-11GSP-3026-SM-5N9CE 1 B1 3 pieces: largest and 1 smaller piece mostly anterior; other small piece all posterior [annotated] 6.7 Pituitary Pituitary 0000007 960 376 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989586 309477 0.969057 0.990813 0.762332 25097 1 76 0.00298325 162 0 7.67749e+07 0.0307491 1.48507e+06 7.74868e+07 4.06192e+06 25125 3.81947e+07 0 0.206725 0.990813 0.755328 7.67749e+07 0.00379672 1.68552e+07 8.29884e+06 1.70070e+07 194 1.69278e+07 8.99637e+06 0.00338948 1.70275e+07 50.1467 0.0191655 0.99204 0 50.2242 GTEX-11GSP-3126-SM-5A5LL 1 B1 2 pieces 6.9 Brain Brain - Cerebellum 0002037 961 375 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988479 331083 0.953412 0.991377 0.735192 24118 1 76 0.00236444 201 0 8.30745e+07 0.0462092 1.32989e+06 8.3797e+07 1.03561e+07 24156 4.13056e+07 0 0.218219 0.991377 0.728853 8.30745e+07 0.00410241 1.80528e+07 1.50041e+07 1.82048e+07 233 1.82665e+07 1.02861e+07 0.00323089 1.82086e+07 49.9207 0.0158704 0.994275 0 50.2097 GTEX-11GSP-3226-SM-5986O 1 B1 2 pieces 6.1 Brain Brain - Cortex 0001870 962 374 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982585 265811 0.972017 0.988281 0.841817 23284 1 76 0.00280908 266 0 7.80388e+07 0.0277075 6.54677e+06 7.89642e+07 1.93631e+07 23304 3.87208e+07 0 0.1302 0.988281 0.831951 7.80388e+07 0.00670279 1.73197e+07 2.06081e+07 1.71531e+07 266 1.7122e+07 7.53432e+06 0.00474471 1.77039e+07 50.8354 0.0829081 0.993976 0 49.7583 GTEX-11H98-0008-SM-5QGR8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 733 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994699 340932 0.974931 0.995683 0.873752 18307 1 76 0.00156528 118 0 5.2178e+07 0.0247286 213609 5.24042e+07 3.56947e+06 18311 2.60141e+07 0 0.101179 0.995683 0.86998 5.2178e+07 0.00232083 1.1649e+07 9.07723e+06 1.16986e+07 116 1.16828e+07 1.34216e+07 0.00194268 1.1727e+07 50.0944 0.00407618 0.996667 0 50.1062 GTEX-11H98-0011-R10b-SM-5NQ98 B1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992549 444931 0.959981 0.994185 0.837459 23278 1 76 0.00187844 200 0 7.22147e+07 0.039573 1.97199e+06 7.26371e+07 5.63893e+06 23292 3.59703e+07 0 0.122521 0.994185 0.83259 7.22147e+07 0.00265857 1.57096e+07 1.47162e+07 1.58178e+07 246 1.58133e+07 9.58205e+06 0.00226786 1.58339e+07 50.0325 0.0271485 0.995822 0 50.1716 GTEX-11H98-0011-R11b-SM-5NQ6U B1, A1 9.2 Brain Brain - Cerebellar Hemisphere 0002037 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992075 367638 0.943245 0.993427 0.733137 23697 1 76 0.00217476 155 0 7.3341e+07 0.0562527 608642 7.38263e+07 5.30564e+06 23727 3.65236e+07 0 0.210109 0.993427 0.728317 7.3341e+07 0.00284567 1.57327e+07 1.1256e+07 1.58183e+07 178 1.58317e+07 1.00848e+07 0.00250976 1.58132e+07 49.9707 0.00824424 0.994778 0 50.1356 GTEX-11H98-0011-R5b-SM-57WCF B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 613 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991959 653747 0.958441 0.99414 0.837815 23360 1 76 0.00181014 199 0 7.48298e+07 0.0411465 2.51093e+06 7.52709e+07 8.76304e+06 23376 3.72512e+07 0 0.120625 0.99414 0.832906 7.48298e+07 0.00340639 1.63847e+07 1.86042e+07 1.63404e+07 254 1.63305e+07 9.98361e+06 0.00260652 1.65442e+07 50.325 0.0333585 0.99632 0 49.9323 GTEX-11H98-0011-R8a-SM-5NQ8V B1, A1 7.7 Brain Brain - Hypothalamus 0001898 613 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.99355 320507 0.960078 0.99522 0.820007 23115 1 76 0.00180757 234 0 7.22601e+07 0.0396009 1.75432e+06 7.26071e+07 5.67088e+06 23133 3.59963e+07 0 0.140072 0.99522 0.816087 7.22601e+07 0.00253921 1.58135e+07 1.21401e+07 1.61933e+07 226 1.60766e+07 1.00702e+07 0.00217277 1.60363e+07 49.9372 0.0241618 0.99689 0 50.5933 GTEX-11H98-0126-SM-5EGHG 1 B1 6 pieces; well trimmed 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 733 598 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98356 207885 0.978786 0.988724 0.799149 22438 1 76 0.00247422 156 0 6.20247e+07 0.0208735 196574 6.27321e+07 1.03654e+07 22462 3.07718e+07 0 0.179637 0.988724 0.790138 6.20247e+07 0.00580066 1.35777e+07 7.98834e+06 1.3671e+07 136 1.37789e+07 1.21141e+07 0.00412876 1.37759e+07 49.9946 0.00313355 0.993888 0 50.1712 GTEX-11H98-0226-SM-5NQ89 1 B1 3 pieces; 20% fibrous component 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 736 596 BP-43495 RNA Extraction from Paxgene-derived Lysate Plate Based 09/12/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991194 244895 0.975123 0.993706 0.832798 21795 1 76 0.00193023 158 0 7.2129e+07 0.0246137 288224 7.25859e+07 5.29752e+06 21810 3.58731e+07 0 0.142325 0.993706 0.827556 7.2129e+07 0.00303704 1.56509e+07 7.45623e+06 1.57865e+07 175 1.57343e+07 1.36291e+07 0.00248224 1.58874e+07 50.242 0.0039708 0.996217 0 50.2157 GTEX-11H98-0326-SM-5HL4S 1 B1 3 pieces; no fat 8.1 Muscle Muscle - Skeletal 0011907 744 589 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992223 258535 0.982492 0.994391 0.847981 20218 1 76 0.00178829 205 0 7.84255e+07 0.0173215 813172 7.88678e+07 8.72062e+06 20231 3.90475e+07 0 0.134511 0.994391 0.843224 7.84255e+07 0.00274637 1.73254e+07 9.74401e+06 1.74269e+07 220 1.73808e+07 1.47026e+07 0.00226628 1.75267e+07 50.2091 0.0103106 0.996559 0 50.1459 GTEX-11H98-0426-SM-5HL55 0 B1 2 pieces; no fat 7.4 Nerve Nerve - Tibial 0001323 746 587 BP-43529 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98953 252965 0.969138 0.992074 0.746204 23404 1 76 0.00211947 161 0 6.89045e+07 0.0305776 145170 6.9455e+07 7.6126e+06 23437 3.42588e+07 0 0.222934 0.992074 0.74029 6.89045e+07 0.0032431 1.51304e+07 6.64435e+06 1.52207e+07 153 1.52089e+07 1.1225e+07 0.00267985 1.53129e+07 50.1703 0.00209013 0.994618 0 50.1487 GTEX-11H98-0426-SM-EZ6XS 0 B1 2 pieces; no fat Nerve Nerve - Tibial 0001323 746 587 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11I78-0001-SM-5Q5BE B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -86 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990804 475947 0.963116 0.9931 0.747279 20003 1 76 0.00183861 128 0 5.69194e+07 0.0365871 426624 5.73149e+07 3.9383e+06 20030 2.83065e+07 0 0.215837 0.9931 0.742123 5.69194e+07 0.00284121 1.25261e+07 1.13705e+07 1.26025e+07 122 1.26125e+07 1.2039e+07 0.00233875 1.26533e+07 50.0806 0.00744351 0.995395 0 50.1521 GTEX-11I78-0002-SM-58Q8G B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11I78-0002-SM-5DWT9 B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11I78-0002-SM-6WBU2 B1 Blood Whole Blood 0013756 -86 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11I78-0005-SM-5N9GB B1 8.8 Blood Whole Blood 0013756 -86 BP-39537 RNA isolation_PAXgene Blood RNA (Manual) 05/31/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987775 941386 0.9548 0.989394 0.801851 19648 1 76 0.00425953 204 0 9.86196e+07 0.0447311 278604 9.96768e+07 5.1586e+06 19660 4.9058e+07 0 0.152949 0.989394 0.793347 9.86196e+07 0.00422999 2.14737e+07 5.21522e+07 2.16867e+07 235 2.17154e+07 2.0346e+07 0.00424478 2.16075e+07 49.8755 0.00279507 0.991013 0 50.2468 GTEX-11I78-0008-SM-5Q5DI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 162 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993343 271191 0.981046 0.995164 0.865559 21288 1 76 0.00177006 285 0 9.8511e+07 0.018629 325405 9.89897e+07 1.33783e+07 21308 4.90824e+07 0 0.115487 0.995164 0.861373 9.8511e+07 0.00284618 2.22616e+07 1.22298e+07 2.22956e+07 262 2.23138e+07 2.64814e+07 0.00230714 2.24223e+07 50.1213 0.00328726 0.996985 0 50.0381 GTEX-11I78-0126-SM-5HL6F 1 B1 2 pieces, dense congestion, hemosiderin laden macrophages distending alveoli; fibrin deposition 7.2 Lung Lung 0008952 80 1314 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990386 244011 0.971419 0.992792 0.773567 23884 1 76 0.00208162 158 0 7.50121e+07 0.0283591 323679 7.55567e+07 8.35743e+06 23922 3.73341e+07 0 0.197852 0.992792 0.767992 7.50121e+07 0.00291352 1.65395e+07 8.04802e+06 1.67524e+07 189 1.67342e+07 1.14026e+07 0.00249656 1.67247e+07 49.9857 0.00428392 0.995199 0 50.3198 GTEX-11I78-0226-SM-5HL6R 1 B1 2 pieces, minimal vascularity/fibrosis 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 81 1313 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992212 237739 0.977898 0.994301 0.850976 21754 1 76 0.0018938 204 0 7.66341e+07 0.0218459 905390 7.70734e+07 8.47333e+06 21765 3.81594e+07 0 0.126922 0.994301 0.846126 7.66341e+07 0.00280665 1.68591e+07 9.49904e+06 1.70312e+07 242 1.69873e+07 1.2703e+07 0.00234927 1.70547e+07 50.099 0.0117471 0.99639 0 50.2538 GTEX-11I78-0526-SM-5986A 1 B1 2 pieces, features of mulinodular goitre 6.9 Thyroid Thyroid 0002046 85 1309 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982023 256049 0.97028 0.988281 0.781269 23625 1 76 0.00252722 135 0 7.55295e+07 0.0294647 381351 7.64251e+07 1.74096e+07 23649 3.74513e+07 0 0.189011 0.988281 0.772113 7.55295e+07 0.00719008 1.65589e+07 8.30832e+06 1.66057e+07 162 1.67224e+07 1.17852e+07 0.00484389 1.68771e+07 50.2303 0.00498987 0.994539 0 50.0705 GTEX-11I78-0626-SM-5A5LZ 1 B1 2 pieces, well preserved, Islets well visualized (rep delineated). 7.8 Pancreas Pancreas 0001150 86 1308 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991484 211254 0.981307 0.993935 0.865554 20915 1 76 0.00183639 91 0 6.86752e+07 0.0184187 176719 6.90942e+07 8.56435e+06 20929 3.419e+07 0 0.115752 0.993935 0.860305 6.86752e+07 0.00354195 1.58527e+07 1.9558e+07 1.59735e+07 115 1.59398e+07 2.12397e+07 0.00268707 1.60519e+07 50.1752 0.00255765 0.996386 0 50.1899 GTEX-11I78-0726-SM-5A5M1 1 B1 6 pieces, minimal atherosis 7.2 Blood Vessel Artery - Aorta 0001496 88 1306 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990754 311105 0.970623 0.993557 0.79726 22683 1 76 0.00190158 131 0 6.21633e+07 0.029084 178444 6.25664e+07 7.05127e+06 22701 3.09172e+07 0 0.173363 0.993557 0.792124 6.21633e+07 0.00372321 1.35298e+07 6.56482e+06 1.36676e+07 145 1.36656e+07 1.08271e+07 0.00280983 1.36975e+07 50.0583 0.00285207 0.996361 0 50.2534 GTEX-11I78-0826-SM-5A5K4 1 B1 2 pieces, minimal ischemic changes 8.4 Heart Heart - Left Ventricle 0006566 90 1304 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992358 218518 0.982905 0.994495 0.866855 20456 1 76 0.00168675 196 0 7.67355e+07 0.0167951 1.4215e+06 7.71602e+07 8.97699e+06 20462 3.82211e+07 0 0.11605 0.994495 0.862084 7.67355e+07 0.00342629 1.69755e+07 1.33486e+07 1.68013e+07 240 1.67983e+07 1.41983e+07 0.00255465 1.71158e+07 50.468 0.0184227 0.996633 0 49.7421 GTEX-11I78-1026-SM-5HL74 1 B1 2 pieces, minimal atherosis; one is fragment of vessel wall; the other is complete, adherent nubbins of fat, delineated, up to ~2mm 6.4 Blood Vessel Artery - Coronary 0001621 101 1293 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992312 205823 0.972646 0.994317 0.821177 22181 1 76 0.00194423 161 0 6.6484e+07 0.0270815 341882 6.6864e+07 7.41047e+06 22198 3.31024e+07 0 0.151469 0.994317 0.81651 6.6484e+07 0.00289569 1.44701e+07 5.86688e+06 1.46182e+07 166 1.45749e+07 1.11454e+07 0.002419 1.46399e+07 50.1113 0.00511309 0.996322 0 50.2545 GTEX-11I78-1126-SM-5A5K5 1 B1 6 pieces, abundant lymphoid aggregates, rep. ones delineated 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 109 1285 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989243 236304 0.968557 0.99216 0.773847 24006 1 76 0.00208232 214 0 7.81778e+07 0.0311624 695983 7.87955e+07 9.31208e+06 24033 3.88941e+07 0 0.19471 0.99216 0.767781 7.81778e+07 0.0043354 1.72415e+07 1.11594e+07 1.73274e+07 214 1.73074e+07 1.08451e+07 0.00320555 1.74681e+07 50.2311 0.00883277 0.995077 0 50.1241 GTEX-11I78-1226-SM-5A5K6 1 B1 6 pieces, mucosa well- preserved, up to ~0.5mm thick 7.6 Colon Colon - Transverse 0001157 113 1281 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990693 195576 0.974327 0.99283 0.813466 22979 1 76 0.00191514 216 0 7.9251e+07 0.0253395 1.19637e+06 7.98234e+07 9.24930e+06 23001 3.94661e+07 0 0.160862 0.99283 0.807633 7.9251e+07 0.00364206 1.76058e+07 1.45916e+07 1.75039e+07 251 1.74658e+07 1.10674e+07 0.00277674 1.77911e+07 50.4613 0.0149877 0.994967 0 49.8549 GTEX-11I78-1326-SM-5PNY9 1 B1 6 pieces, all muscularis, good specimens 8.2 Colon Colon - Sigmoid 0001159 118 1276 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992831 186972 0.97829 0.99356 0.856671 21124 1 76 0.0028589 214 0 8.57996e+07 0.0214175 540669 8.63558e+07 2.52742e+06 21135 4.27515e+07 0 0.121619 0.99356 0.851154 8.57996e+07 0.00324737 1.86218e+07 6.38963e+06 1.88185e+07 240 1.87205e+07 1.645e+07 0.00305299 1.87804e+07 50.0798 0.00626095 0.994289 0 50.2627 GTEX-11I78-1426-SM-5PNVY 1 B1 6 pieces, all muscularis, good specimens 8.5 Esophagus Esophagus - Muscularis 0004648 120 1274 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991506 229145 0.976424 0.99397 0.848431 20583 1 76 0.00178272 147 0 5.75317e+07 0.0232432 383628 5.78807e+07 5.71877e+06 20591 2.86254e+07 0 0.127993 0.99397 0.843315 5.75317e+07 0.00295754 1.24468e+07 4.5417e+06 1.25319e+07 145 1.25027e+07 1.05722e+07 0.00236868 1.26093e+07 50.2122 0.00662791 0.996434 0 50.1702 GTEX-11I78-1526-SM-5A5K7 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~25-30% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 121 1273 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.9915 269982 0.978449 0.99352 0.841928 21125 1 76 0.00194218 168 0 7.20792e+07 0.0211146 299964 7.25493e+07 8.16114e+06 21142 3.58922e+07 0 0.13652 0.99352 0.836472 7.20792e+07 0.00353642 1.62656e+07 1.02221e+07 1.63902e+07 173 1.64087e+07 1.49402e+07 0.00273768 1.63825e+07 49.96 0.00413462 0.995539 0 50.1909 GTEX-11I78-1626-SM-5A5M2 1 B1 6 pieces, all muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 123 1271 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990983 239128 0.976664 0.993428 0.855221 22280 1 76 0.00182144 203 0 8.13654e+07 0.0230625 862862 8.19036e+07 9.90646e+06 22292 4.05016e+07 0 0.121442 0.993428 0.849601 8.13654e+07 0.00372448 1.80062e+07 8.31349e+06 1.81614e+07 253 1.8114e+07 1.2958e+07 0.00277062 1.82419e+07 50.1759 0.0105351 0.995873 0 50.2146 GTEX-11I78-1726-SM-5A5M3 1 B1 6 pieces, mucosa extremely well preserved, up to ~1mm or ~40% thickness 7.8 Stomach Stomach 0000945 125 1269 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.982964 462359 0.975684 0.987328 0.817515 22941 1 76 0.00182527 296 0 8.39695e+07 0.0239291 874167 8.50472e+07 1.0824e+07 22964 4.16423e+07 0 0.158168 0.987328 0.807156 8.39695e+07 0.00410005 1.90493e+07 6.98992e+07 1.90915e+07 233 1.91437e+07 1.85763e+07 0.00295763 1.93616e+07 50.283 0.0102786 0.991692 0 50.0554 GTEX-11I78-1826-SM-5A5M4 1 B1 2 pieces, all cortex, minimal fat 8.5 Adrenal Gland Adrenal Gland 0002369 128 1266 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991328 304288 0.975629 0.99349 0.818699 23663 1 76 0.00185983 271 0 9.01052e+07 0.0239952 1.20979e+06 9.06956e+07 9.69314e+06 23692 4.48582e+07 0 0.15693 0.99349 0.81337 9.01052e+07 0.00351184 1.98557e+07 1.45588e+07 1.98329e+07 265 1.98049e+07 1.41327e+07 0.00268404 2.00679e+07 50.3297 0.013339 0.995653 0 49.9713 GTEX-11I78-1926-SM-59878 1 B1 2 pieces, typical post menopausal involutional changes 8.6 Ovary Ovary 0000992 130 1264 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98642 316202 0.971913 0.990984 0.790426 22849 1 76 0.00250178 145 0 7.24896e+07 0.0277672 135562 7.31491e+07 1.38891e+07 22876 3.59959e+07 0 0.181488 0.990984 0.783299 7.24896e+07 0.00635435 1.599e+07 8.69354e+06 1.60993e+07 151 1.62059e+07 1.35909e+07 0.00441919 1.61958e+07 49.9844 0.00185323 0.995548 0 50.1703 GTEX-11I78-2026-SM-5987C 1 B1 6 pieces; squamous mucosa is ~0.25mm thick, 10% total thickness 8.7 Vagina Vagina 0000996 143 1251 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985711 295429 0.972993 0.989457 0.78713 22297 1 76 0.00262053 142 0 7.21435e+07 0.0267561 184395 7.29122e+07 1.47132e+07 22313 3.58598e+07 0 0.185863 0.989457 0.778831 7.21435e+07 0.0060244 1.61e+07 1.03554e+07 1.60766e+07 153 1.61613e+07 1.26725e+07 0.00431603 1.62713e+07 50.1696 0.002529 0.993202 0 49.9636 GTEX-11I78-2126-SM-5A5K8 1 B1 2 pieces, myometrium, foci of adenomyosis in one section (rep. foci delineated) 8.3 Uterus Uterus 0000995 145 1249 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990085 288779 0.968892 0.992872 0.799834 23663 1 76 0.00189303 217 0 9.00526e+07 0.0307952 137094 9.0699e+07 1.19104e+07 23693 4.48098e+07 0 0.169059 0.992872 0.794133 9.00526e+07 0.00367749 1.96442e+07 8.81973e+06 1.98556e+07 251 1.98895e+07 1.65007e+07 0.00278276 1.98442e+07 49.9431 0.00151153 0.99566 0 50.2675 GTEX-11I78-2226-SM-5PNYA 0 B1 2 pieces, one with prominent fibrocystic change (ensquared), prominent focus of apocrine metaplasia (delineated) 6.7 Breast Breast - Mammary Tissue 0008367 147 1247 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991745 186175 0.973429 0.992452 0.814856 23738 1 76 0.00294823 207 0 8.28758e+07 0.0263376 674878 8.35061e+07 2.22433e+06 23767 4.12928e+07 0 0.158573 0.992452 0.808705 8.28758e+07 0.00346239 1.81601e+07 8.06957e+06 1.84972e+07 226 1.8369e+07 1.2452e+07 0.00320513 1.83448e+07 49.9671 0.00808178 0.993159 0 50.4598 GTEX-11I78-2326-SM-5Q5AH 0 B1 2 pieces, clean specimens, no adherent fat 6.9 Blood Vessel Artery - Tibial 0007610 157 1237 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990495 160328 0.974768 0.992894 0.849491 21770 1 76 0.00166435 209 0 8.65711e+07 0.0248419 268633 8.71906e+07 6.42762e+06 21784 4.30735e+07 0 0.125277 0.992894 0.843455 8.65711e+07 0.00266305 1.86066e+07 6.66178e+06 1.87375e+07 255 1.87131e+07 1.72327e+07 0.00216249 1.8828e+07 50.1531 0.00308099 0.995293 0 50.1753 GTEX-11I78-2426-SM-5A5K9 0 B1 2 pieces, ~10% interstitial fat, rep foci delineated 8.3 Muscle Muscle - Skeletal 0011907 159 1235 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991658 223689 0.982766 0.994049 0.881448 19287 1 76 0.00170103 209 0 7.83543e+07 0.0170155 1.14963e+06 7.88234e+07 8.90162e+06 19291 3.90185e+07 0 0.101318 0.994049 0.876202 7.83543e+07 0.00346213 1.72019e+07 1.04009e+07 1.72826e+07 238 1.72995e+07 1.63881e+07 0.00257946 1.73497e+07 50.0725 0.0145849 0.996441 0 50.1169 GTEX-11I78-2626-SM-5Q5AI 0 B1 2 pieces, ~5% fascia/vascular tissue, delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 163 1231 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989537 178104 0.976525 0.992383 0.829628 22109 1 76 0.00172193 173 0 7.49756e+07 0.0231769 298794 7.5551e+07 5.96691e+06 22130 3.72941e+07 0 0.146897 0.992383 0.823309 7.49756e+07 0.0027205 1.64851e+07 7.29172e+06 1.65694e+07 195 1.65634e+07 1.35487e+07 0.00221978 1.6695e+07 50.1978 0.00395486 0.99523 0 50.1275 GTEX-11ILO-0002-SM-5CV9V C1 Blood Whole Blood 0013756 362 BP-39533 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/31/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ILO-0006-SM-5LZWE C1 9.2 Blood Whole Blood 0013756 362 BP-39537 RNA isolation_PAXgene Blood RNA (Manual) 05/31/2013 LCSET-4900 03/23/2014 TruSeq.v1 EXCLUDE 0.989961 510487 0.969615 0.991577 0.771265 20401 1 76 0.00273463 117 0 6.87203e+07 0.0300041 103371 6.93041e+07 3.55378e+06 20423 3.42106e+07 0 0.198351 0.991577 0.764768 6.87203e+07 0.00345162 1.54187e+07 4.08267e+07 1.5593e+07 127 1.56508e+07 1.50751e+07 0.00309254 1.54788e+07 49.7237 0.00149156 0.993193 0 50.2811 GTEX-11ILO-0008-SM-5QGR9 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 373 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.994268 227405 0.976277 0.995456 0.859839 19771 1 76 0.00153917 158 0 6.09878e+07 0.0233631 184323 6.12662e+07 4.36562e+06 19779 3.03977e+07 0 0.116438 0.995456 0.855932 6.09878e+07 0.00231155 1.36133e+07 7.06324e+06 1.36924e+07 141 1.36811e+07 1.46328e+07 0.0019249 1.36994e+07 50.0334 0.00300856 0.996643 0 50.1448 GTEX-11ILO-0126-SM-5A5LN 0 C1 6 pieces; up to 40% internal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 372 1103 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.988999 215000 0.970153 0.991763 0.789158 24005 1 76 0.00200965 169 0 7.0958e+07 0.029669 407312 7.15473e+07 8.68529e+06 24028 3.53094e+07 0 0.180995 0.991763 0.782657 7.0958e+07 0.00389327 1.55117e+07 7.71347e+06 1.56487e+07 172 1.56508e+07 1.12859e+07 0.00294884 1.5694e+07 50.0688 0.0056929 0.994528 0 50.2198 GTEX-11ILO-0226-SM-5N9D3 0 C1 2 pieces 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 374 1102 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.991632 216994 0.973964 0.993016 0.786443 23714 1 76 0.00287569 163 0 7.57155e+07 0.0257524 252878 7.6248e+07 3.75502e+06 23746 3.77029e+07 0 0.187521 0.993016 0.78095 7.57155e+07 0.00343348 1.66886e+07 6.55359e+06 1.68116e+07 174 1.67972e+07 1.26728e+07 0.00315419 1.68017e+07 50.0066 0.00331652 0.9944 0 50.1837 GTEX-11ILO-0426-SM-5HL4V 0 C1 2 pieces; 10 & 30% internal fat; 10 & 30 % external fat 6.6 Nerve Nerve - Tibial 0001323 378 1100 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.986134 293170 0.963621 0.988296 0.755909 24372 1 76 0.00211967 157 0 7.58546e+07 0.0360999 184435 7.67529e+07 7.52195e+06 24408 3.77056e+07 0 0.207712 0.988296 0.747062 7.58546e+07 0.00332108 1.65753e+07 1.02782e+07 1.67002e+07 172 1.66556e+07 1.21503e+07 0.00271906 1.67816e+07 50.1884 0.00240297 0.990459 0 50.1876 GTEX-11ILO-0526-SM-5N9DF 1 C1 2 pieces; mild medial calcification; no external fat 7.8 Blood Vessel Artery - Tibial 0007610 379 1100 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.993412 154967 0.974018 0.994241 0.833791 21696 1 76 0.00267242 143 0 7.18136e+07 0.0256429 253755 7.22296e+07 3.50853e+06 21711 3.57713e+07 0 0.140227 0.994241 0.82899 7.18136e+07 0.00313816 1.54577e+07 5.21448e+06 1.55313e+07 163 1.54712e+07 1.42045e+07 0.0029051 1.55773e+07 50.1708 0.00351317 0.99507 0 50.1188 GTEX-11ILO-0626-SM-5A5LO 1 C1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 381 1099 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990802 210026 0.975808 0.993417 0.82198 23014 1 76 0.00197349 172 0 6.96931e+07 0.023967 269666 7.01549e+07 8.28838e+06 23035 3.46895e+07 0 0.153828 0.993417 0.816569 6.96931e+07 0.00388126 1.5285e+07 7.58235e+06 1.54096e+07 170 1.54287e+07 1.23982e+07 0.00292486 1.54372e+07 50.0138 0.00384387 0.996032 0 50.203 GTEX-11ILO-0726-SM-5HL5I 1 C1 2 pieces; pleura [not target] along 1 surface [annotated] 6.7 Lung Lung 0008952 396 1085 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.989373 270954 0.969488 0.991696 0.762154 22200 1 76 0.00225872 128 0 6.3293e+07 0.030279 330771 6.3823e+07 7.40846e+06 22219 3.14608e+07 0 0.207334 0.991696 0.755825 6.3293e+07 0.00341652 1.37991e+07 1.10376e+07 1.39531e+07 142 1.39205e+07 1.0688e+07 0.00283627 1.39775e+07 50.1023 0.00518263 0.994018 0 50.2774 GTEX-11ILO-1026-SM-5A5LP 1 C1 4 pieces; partial sloughing of epithelium; glandular atrophy and squamous metaplasia of glandular ducts 6.2 Esophagus Esophagus - Mucosa 0006920 405 1078 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.989381 250763 0.970041 0.992481 0.798226 22606 1 76 0.00199694 135 0 6.0516e+07 0.0298081 466278 6.09744e+07 6.92456e+06 22620 3.00999e+07 0 0.171815 0.992481 0.792225 6.0516e+07 0.00400848 1.34824e+07 7.40399e+06 1.35595e+07 155 1.35703e+07 8.39633e+06 0.00299957 1.36512e+07 50.1487 0.00764711 0.995581 0 50.1425 GTEX-11ILO-1526-SM-5A5KZ 2 C1 2 pieces; 40% internal and external fat 6.4 Pancreas Pancreas 0001150 415 1071 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990414 294588 0.965908 0.992969 0.779559 22530 1 76 0.00213411 111 0 7.08981e+07 0.0337817 240728 7.14001e+07 8.72915e+06 22557 3.52782e+07 0 0.186349 0.992969 0.774078 7.08981e+07 0.00416056 1.58707e+07 1.5816e+07 1.61247e+07 123 1.61168e+07 1.61527e+07 0.00314473 1.60578e+07 49.9084 0.00337154 0.995524 0 50.397 GTEX-11ILO-2026-SM-5N9CQ 3 C1 6 pieces; mucosa=3; muscle=1 5.9 Colon Colon - Transverse 0001157 433 1057 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.987529 247752 0.96882 0.988493 0.830939 23154 1 76 0.00384381 139 0 6.95391e+07 0.0268825 159621 7.03486e+07 3.36494e+06 23167 3.44477e+07 0 0.137881 0.988493 0.821378 6.95391e+07 0.00453264 1.51957e+07 9.47668e+06 1.52592e+07 161 1.52237e+07 1.18884e+07 0.00418789 1.52969e+07 50.1199 0.002269 0.989457 0 50.1042 GTEX-11ILO-2226-SM-5A5L1 1 C1 2 pieces; 1 piece with ducts and atrophic lobules; 1 with 80%, other with 50% fat 7 Breast Breast - Mammary Tissue 0008367 440 1052 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990726 266149 0.970442 0.993144 0.740551 24872 1 76 0.0020898 165 0 7.9809e+07 0.0292956 306037 8.036e+07 9.71419e+06 24914 3.97198e+07 0 0.229891 0.993144 0.735474 7.9809e+07 0.00376797 1.75975e+07 8.30448e+06 1.77374e+07 183 1.77643e+07 1.21383e+07 0.00292684 1.77512e+07 49.9815 0.00380833 0.995562 0 50.1979 GTEX-11ILO-2526-SM-5A5LQ 1 C1 2 pieces 6.2 Heart Heart - Atrial Appendage 0006631 453 1040 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 EXCLUDE 0.990212 305670 0.975398 0.993213 0.781154 23071 1 76 0.0018625 193 0 8.45723e+07 0.0243598 1.42952e+06 8.51502e+07 9.85494e+06 23101 4.20693e+07 0 0.194244 0.993213 0.775852 8.45723e+07 0.00383148 1.75698e+07 8.46136e+06 1.76811e+07 205 1.77043e+07 1.35241e+07 0.00284402 1.7775e+07 50.0996 0.0167882 0.996213 0 50.1577 GTEX-11ILO-2626-SM-DLIPH 2 C1 2 pieces both atrophic with fibrosis, 1 with 50% adjacent fibroadipose tissue; other with 90%adjacent fibroadipose tissue and a lymph node; material of dubious value Thyroid Thyroid 0002046 456 1038 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-11LCK-0002-SM-58Q7P B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11LCK-0002-SM-5DWRA B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11LCK-0002-SM-6WBSW B1 Blood Whole Blood 0013756 -156 BP-39600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/04/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11LCK-0005-SM-5O98U B1 7.2 Blood Whole Blood 0013756 -156 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988181 1.25654e+06 0.944081 0.991929 0.770871 20045 1 76 0.00247307 196 0 9.85861e+07 0.0553599 309784 9.93883e+07 1.28536e+07 20062 4.8975e+07 0 0.17321 0.991929 0.764649 9.85861e+07 0.00429422 2.09924e+07 5.04887e+07 2.11897e+07 207 2.12386e+07 1.81128e+07 0.0033802 2.13168e+07 50.0919 0.00311691 0.995677 0 50.2339 GTEX-11LCK-0008-SM-5Q5BB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 259 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.9921 334131 0.977256 0.994467 0.871417 19414 1 76 0.00153505 136 0 6.05106e+07 0.0223829 210462 6.08472e+07 4.46491e+06 19424 3.01122e+07 0 0.105839 0.994467 0.866596 6.05106e+07 0.00251883 1.35135e+07 8.78481e+06 1.35707e+07 131 1.35834e+07 1.60149e+07 0.00202577 1.36501e+07 50.1223 0.00345886 0.996834 0 50.1055 GTEX-11LCK-0126-SM-5A5M5 1 B1 2 pieces, well-preserved; no abnormalities 7.5 Spleen Spleen 0002106 184 1147 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989794 307817 0.96189 0.991921 0.761208 24669 1 76 0.00258055 204 0 8.4527e+07 0.0369358 589864 8.52155e+07 9.6535e+06 24702 4.20365e+07 0 0.200682 0.991921 0.755058 8.4527e+07 0.00436292 1.85262e+07 1.28311e+07 1.8659e+07 217 1.86652e+07 1.20272e+07 0.00346982 1.86868e+07 50.0289 0.00692203 0.994048 0 50.1785 GTEX-11LCK-0226-SM-5A5M6 1 B1 2 pieces, ~40% adherent or interstitial fat; delineated. Islets well represented/preserved; rep ones delineated 6.8 Pancreas Pancreas 0001150 188 1145 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990033 279734 0.970462 0.992506 0.819123 21680 1 76 0.00213602 113 0 7.31735e+07 0.0293264 285701 7.37261e+07 8.93507e+06 21702 3.64187e+07 0 0.151339 0.992506 0.812984 7.31735e+07 0.00388711 1.65997e+07 1.67931e+07 1.67613e+07 133 1.67462e+07 1.76548e+07 0.00300938 1.67946e+07 50.0721 0.00387517 0.994978 0 50.2423 GTEX-11LCK-0326-SM-5A5M7 1 B1 2 pieces, pure adipose tissue, no fibrous tissue/vessels; excellent specimen 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 191 1143 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991341 220831 0.977463 0.993849 0.833542 22270 1 76 0.00201904 170 0 7.26082e+07 0.0222632 546470 7.30576e+07 9.13781e+06 22286 3.6141e+07 0 0.14392 0.993849 0.828415 7.26082e+07 0.00388772 1.59677e+07 6.73019e+06 1.61664e+07 186 1.61344e+07 1.22332e+07 0.00295102 1.61695e+07 50.0544 0.00747999 0.996356 0 50.3092 GTEX-11LCK-0426-SM-5A5M8 1 B1 2 pieces, minimal congestion 9.1 Lung Lung 0008952 195 1139 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990978 272970 0.977149 0.993271 0.805608 23624 1 76 0.00217151 205 0 8.05631e+07 0.0223441 338708 8.11089e+07 9.87507e+06 23653 4.00982e+07 0 0.17154 0.993271 0.800188 8.05631e+07 0.00385281 1.79215e+07 7.33274e+06 1.80819e+07 209 1.8116e+07 1.50659e+07 0.00301022 1.80593e+07 49.9217 0.00417597 0.995565 0 50.2228 GTEX-11LCK-0526-SM-5A5M9 1 B1 2 pieces, regressive areas, adherent fat/fibrous tags, delineated 7.5 Thyroid Thyroid 0002046 199 1136 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.98839 353940 0.965511 0.991653 0.731117 24511 1 76 0.00210845 138 0 7.59419e+07 0.0341969 255546 7.65811e+07 9.30079e+06 24557 3.77553e+07 0 0.234395 0.991653 0.725014 7.59419e+07 0.00391242 1.65393e+07 7.87777e+06 1.66896e+07 161 1.67573e+07 1.16864e+07 0.00300746 1.67018e+07 49.9172 0.00333693 0.994917 0 50.2263 GTEX-11LCK-0726-SM-5PNYC 1 B1 6 pieces, up to ~1mm adherent serosa on several sections 7.9 Blood Vessel Artery - Aorta 0001496 244 1092 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992901 293492 0.975881 0.993527 0.839516 22648 1 76 0.00305737 278 0 1.05792e+08 0.0237218 289719 1.06481e+08 3.12364e+06 22673 5.26949e+07 0 0.136365 0.993527 0.834082 1.05792e+08 0.00345122 2.28823e+07 8.87916e+06 2.31783e+07 298 2.30619e+07 2.08944e+07 0.00325417 2.30656e+07 50.0041 0.00272084 0.994152 0 50.3212 GTEX-11LCK-0826-SM-5PNYD 1 B1 2 pieces, one section is ~50% adherent/ interstitial fat 8.3 Heart Heart - Atrial Appendage 0006631 249 1087 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99236 233388 0.979501 0.993461 0.835441 22271 1 76 0.0030911 268 0 9.8381e+07 0.0202518 1.63915e+06 9.90285e+07 2.59938e+06 22291 4.90236e+07 0 0.14406 0.993461 0.829978 9.8381e+07 0.00349617 2.12599e+07 1.99615e+07 2.15735e+07 289 2.13054e+07 1.45146e+07 0.00329341 2.16208e+07 50.3673 0.0165523 0.994562 0 50.3662 GTEX-11LCK-0926-SM-5A5KA 1 B1 2 pieces no significant ischemic changes 7.7 Heart Heart - Left Ventricle 0006566 254 1082 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991976 210382 0.982253 0.993925 0.848214 21147 1 76 0.00202819 268 0 8.69022e+07 0.0175283 1.542e+06 8.74334e+07 9.45458e+06 21162 4.32956e+07 0 0.134039 0.993925 0.843062 8.69022e+07 0.00370696 1.92337e+07 1.80189e+07 1.90252e+07 259 1.89968e+07 1.32569e+07 0.00286593 1.93893e+07 50.5114 0.0176363 0.995873 0 49.7275 GTEX-11LCK-1026-SM-5A5KB 0 B1 6 pieces, trace adherent dermal fat, delineated; squamous epithelium is ~45microns thick 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 259 1078 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990473 196939 0.970213 0.993192 0.788758 23266 1 76 0.00204666 159 0 6.60664e+07 0.0295486 349246 6.65193e+07 7.93577e+06 23291 3.28776e+07 0 0.181455 0.993192 0.783388 6.60664e+07 0.00377673 1.44215e+07 7.17797e+06 1.4532e+07 150 1.45656e+07 1.15539e+07 0.00290933 1.45556e+07 49.9829 0.00525029 0.995911 0 50.1908 GTEX-11LCK-1126-SM-5A5KC 0 B1 2 pieces ~5% fibrous/fascial tissue, delineated 7 Adipose Tissue Adipose - Subcutaneous 0002190 265 1072 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990067 294909 0.974282 0.993031 0.795635 24023 1 76 0.00209846 279 0 9.59539e+07 0.025404 510423 9.66273e+07 1.12306e+07 24055 4.77297e+07 0 0.178647 0.993031 0.79009 9.59539e+07 0.00403294 2.10576e+07 9.3558e+06 2.1258e+07 276 2.13124e+07 1.63364e+07 0.00306281 2.12709e+07 49.9513 0.00528239 0.995995 0 50.2368 GTEX-11LCK-1226-SM-5Q5AM 0 B1 2 pieces, ~5-10% interstitial fat, rep focus delineated 8.1 Muscle Muscle - Skeletal 0011907 273 1065 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992901 174399 0.984906 0.994927 0.881535 19329 1 76 0.00170002 157 0 6.74384e+07 0.0149159 757313 6.77823e+07 4.80345e+06 19333 3.35849e+07 0 0.103371 0.994927 0.877062 6.74384e+07 0.00270612 1.48403e+07 8.78306e+06 1.49238e+07 174 1.48325e+07 1.29266e+07 0.00220205 1.50565e+07 50.3747 0.0111727 0.996952 0 50.1403 GTEX-11LCK-1326-SM-5Q5AN 0 B1 2 pieces, clean specimens, no adherent fat 7.1 Nerve Nerve - Tibial 0001323 296 1042 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.985327 209100 0.965051 0.987311 0.753464 22969 1 76 0.00210077 152 0 6.15907e+07 0.0346661 309423 6.23823e+07 4.7962e+06 23006 3.06118e+07 0 0.211587 0.987311 0.743903 6.15907e+07 0.00317697 1.35104e+07 6.45734e+06 1.361e+07 146 1.35729e+07 9.38116e+06 0.00263779 1.3669e+07 50.1764 0.00496011 0.989296 0 50.1837 GTEX-11LCK-1426-SM-5HL5R 0 B1 2 pieces, clean specimens; no adherent fat 6.7 Blood Vessel Artery - Tibial 0007610 301 1038 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991203 237592 0.973667 0.993325 0.826229 21109 1 76 0.00206986 164 0 7.22896e+07 0.0260059 358295 7.27753e+07 8.42404e+06 21132 3.59792e+07 0 0.147439 0.993325 0.820714 7.22896e+07 0.0029833 1.55303e+07 5.86394e+06 1.56712e+07 180 1.56518e+07 1.29024e+07 0.00252561 1.56937e+07 50.0669 0.0049233 0.995447 0 50.2257 GTEX-11LCK-1526-SM-5HL64 1 B1 2 pieces all muscularis, good specimens 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 331 1008 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990801 207894 0.971679 0.993055 0.791832 22069 1 76 0.0021326 141 0 6.76381e+07 0.0281233 774050 6.81111e+07 7.74576e+06 22091 3.36608e+07 0 0.179847 0.993055 0.786332 6.76381e+07 0.00312079 1.46365e+07 6.79802e+06 1.47729e+07 163 1.4737e+07 9.9378e+06 0.00262557 1.48156e+07 50.133 0.0113645 0.995309 0 50.2318 GTEX-11LCK-1626-SM-5PNYB 1 B1 6 pieces, all muscularis, good specimens 7.9 Esophagus Esophagus - Muscularis 0004648 332 1008 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990645 268986 0.973354 0.991192 0.808177 22338 1 76 0.0032651 212 0 8.6663e+07 0.0264254 887297 8.74331e+07 2.58962e+06 22360 4.31472e+07 0 0.165177 0.991192 0.801059 8.6663e+07 0.0036593 1.86769e+07 7.58447e+06 1.89212e+07 215 1.88165e+07 1.38565e+07 0.00346209 1.88316e+07 50.0201 0.0101483 0.99174 0 50.3249 GTEX-11LCK-1726-SM-5S2OQ 1 B1 6 pieces, squamous mucosa is ~0.25mm, ~10-15% total thickness 9.1 Esophagus Esophagus - Mucosa 0006920 333 1007 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993191 279884 0.974639 0.994635 0.827393 20820 1 76 0.00184358 115 0 5.22956e+07 0.025096 144279 5.25776e+07 3.68702e+06 20830 2.60362e+07 0 0.147246 0.994635 0.822954 5.22956e+07 0.002595 1.17632e+07 8.05678e+06 1.18052e+07 120 1.17908e+07 1.07731e+07 0.00221875 1.18554e+07 50.1367 0.00274411 0.996079 0 50.0891 GTEX-11LCK-1926-SM-5A5KE 2 B1 6 pieces, lymphoid aggregates well- represented, delineated, ~10% total tissue 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 349 992 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990654 214596 0.971712 0.992942 0.795311 23714 1 76 0.00211733 202 0 8.45528e+07 0.0280501 1.05469e+06 8.51538e+07 1.00819e+07 23739 4.20984e+07 0 0.176401 0.992942 0.789698 8.45528e+07 0.00387659 1.83712e+07 1.04911e+07 1.84209e+07 248 1.8421e+07 1.21411e+07 0.00299493 1.85438e+07 50.1661 0.0123857 0.99523 0 50.0675 GTEX-11LCK-2026-SM-5A5MA 1 B1 6 pieces, mucosa reasonably well preserved, focally approaches score '2' in a few foci; ~10% total thicknees, averaging 0.3-0.4mm 6.3 Colon Colon - Transverse 0001157 350 991 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989581 221564 0.972679 0.992122 0.79165 23135 1 76 0.00235566 204 0 7.26117e+07 0.0267415 1.32046e+06 7.31882e+07 8.69336e+06 23162 3.61247e+07 0 0.181029 0.992122 0.785413 7.26117e+07 0.00411236 1.61766e+07 1.33235e+07 1.61196e+07 211 1.60827e+07 8.13695e+06 0.00323176 1.63781e+07 50.455 0.018042 0.994663 0 49.9117 GTEX-11LCK-2226-SM-5HL4Q 0 B1 6 pieces, prominent adherent fat up to ~2mm on one section, delineated; squamous epithelium is ~70 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 364 978 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991819 283899 0.971516 0.993821 0.772618 23511 1 76 0.00211611 188 0 7.90523e+07 0.0282624 526935 7.95438e+07 8.10911e+06 23538 3.93534e+07 0 0.198898 0.993821 0.767844 7.90523e+07 0.00303388 1.73412e+07 8.29555e+06 1.75087e+07 193 1.74772e+07 1.23153e+07 0.00257407 1.7525e+07 50.0682 0.00662446 0.995823 0 50.2403 GTEX-11LCK-2326-SM-5HL53 1 B1 2 pieces, spermatogenesis present 6.2 Testis Testis 0000473 370 972 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990035 287153 0.917938 0.992042 0.71737 32476 1 76 0.00221597 175 0 7.767e+07 0.081775 1.08963e+06 7.8293e+07 7.96566e+06 32536 3.86765e+07 0 0.200569 0.992042 0.711661 7.767e+07 0.00299274 1.59248e+07 1.5137e+07 1.60026e+07 167 1.60363e+07 1.12698e+07 0.00260357 1.60261e+07 49.9841 0.0139173 0.99405 0 50.1218 GTEX-11LCK-2426-SM-5HL5F 0 B1 2 pieces, fibroadipose tissue, no ductal elements noted 5.8 Breast Breast - Mammary Tissue 0008367 379 963 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990064 253562 0.971372 0.992847 0.763911 23147 1 76 0.00219053 128 0 5.95633e+07 0.0283694 269017 5.99924e+07 6.58436e+06 23175 2.96215e+07 0 0.207461 0.992847 0.758447 5.95633e+07 0.00339677 1.30748e+07 6.29267e+06 1.31866e+07 140 1.31932e+07 8.94952e+06 0.00279196 1.32255e+07 50.0611 0.00448418 0.99563 0 50.2129 GTEX-11NSD-0005-SM-5LZZ5 B1 9.1 Blood Whole Blood 0013756 141 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4901 03/23/2014 TruSeq.v1 EXCLUDE 0.989089 495439 0.948062 0.989965 0.614429 19432 1 76 0.00367995 111 0 6.96974e+07 0.0516359 39164 7.04039e+07 4.05373e+06 19465 3.46518e+07 0 0.333633 0.989965 0.608263 6.96974e+07 0.00409928 1.51528e+07 2.06266e+07 1.51862e+07 118 1.52432e+07 9.2195e+06 0.00388943 1.51658e+07 49.8727 0.000556276 0.990841 0 50.0551 GTEX-11NSD-0008-SM-5Q5BC B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 288 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99221 320571 0.972954 0.994563 0.854632 19857 1 76 0.00154654 149 0 6.11688e+07 0.0266582 179625 6.15032e+07 4.63474e+06 19870 3.04474e+07 0 0.118322 0.994563 0.849985 6.11688e+07 0.00241033 1.35752e+07 9.65318e+06 1.36521e+07 142 1.36707e+07 1.42202e+07 0.00197741 1.3701e+07 50.0553 0.00292058 0.996915 0 50.1411 GTEX-11NSD-0126-SM-5987F 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes 7.8 Thyroid Thyroid 0002046 82 1054 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984254 261939 0.965469 0.989103 0.760274 23982 1 76 0.00270882 133 0 7.29049e+07 0.0342139 427936 7.37081e+07 1.64618e+07 24018 3.61951e+07 0 0.205195 0.989103 0.751989 7.29049e+07 0.00597941 1.59111e+07 8.17349e+06 1.5938e+07 149 1.60495e+07 1.17314e+07 0.0043361 1.61257e+07 50.1183 0.00580582 0.993952 0 50.0421 GTEX-11NSD-0126-SM-DLIPG 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes Thyroid Thyroid 0002046 82 1054 BP-49830 DNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11NSD-0126-SM-DMZ2Z 1 B1 2 pieces, ~2mm colloid cyst, featurs of goiter, regressive changes Thyroid Thyroid 0002046 82 1054 BP-49830 DNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11NSD-0226-SM-5A5LR 1 B1 2 pieces, well preserved; one section shows medulla (delinteated) as well as cortex, the other is cortex and ~40% adherent fat (delineated) 8.9 Adrenal Gland Adrenal Gland 0002369 84 1052 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990948 216412 0.976136 0.993595 0.826178 22587 1 76 0.00198123 201 0 7.58173e+07 0.0234719 1.22326e+06 7.6306e+07 8.96132e+06 22608 3.7733e+07 0 0.149958 0.993595 0.820887 7.58173e+07 0.00368922 1.66448e+07 8.53776e+06 1.66896e+07 211 1.66997e+07 1.29871e+07 0.00283295 1.68138e+07 50.1702 0.0160309 0.996242 0 50.0673 GTEX-11NSD-0326-SM-5A5LS 1 B1 2 pieces, patchy congrestion, fibrin deposition 8.4 Lung Lung 0008952 84 1052 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990742 260086 0.97344 0.993153 0.799095 23889 1 76 0.00220011 137 0 6.92746e+07 0.0261347 384117 6.97522e+07 8.01182e+06 23920 3.44744e+07 0 0.174345 0.993153 0.793623 6.92746e+07 0.00390537 1.53491e+07 6.70993e+06 1.55189e+07 164 1.55298e+07 1.19674e+07 0.00305067 1.54954e+07 49.9445 0.00550688 0.995563 0 50.275 GTEX-11NSD-0426-SM-5N9CR 1 B1 2 pieces, mild congestion 6.5 Spleen Spleen 0002106 85 1051 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990635 235000 0.964015 0.991814 0.785905 24340 1 76 0.0033655 165 0 8.41888e+07 0.0346763 410495 8.48837e+07 4.42774e+06 24369 4.18679e+07 0 0.178111 0.991814 0.779471 8.41888e+07 0.00395565 1.85144e+07 1.10071e+07 1.86369e+07 201 1.86058e+07 1.2843e+07 0.00366023 1.86444e+07 50.0518 0.00483597 0.992992 0 50.165 GTEX-11NSD-0526-SM-5A5LT 1 B1 2 pieces, well- preserved; Islets well visualized; rep ones delineated 6.9 Pancreas Pancreas 0001150 86 1050 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988421 350739 0.980469 0.991348 0.860242 22069 1 76 0.00213006 195 0 1.18934e+08 0.0191526 340121 1.19972e+08 1.64579e+07 22087 5.91779e+07 0 0.120227 0.991348 0.8528 1.18934e+08 0.00394294 2.75409e+07 5.39957e+07 2.79627e+07 206 2.7922e+07 3.82105e+07 0.00303383 2.79297e+07 50.0069 0.002835 0.994276 0 50.38 GTEX-11NSD-0626-SM-5A5LU 0 B1 6 pieces, trace dermal fat, delineated; squamous epithelium is ~70 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 87 1049 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989792 264952 0.969926 0.992107 0.798147 23989 1 76 0.00210847 189 0 7.38262e+07 0.0298261 860362 7.44135e+07 7.56826e+06 24015 3.67495e+07 0 0.171779 0.992107 0.791847 7.38262e+07 0.00387167 1.6119e+07 1.02956e+07 1.62447e+07 190 1.62104e+07 1.10438e+07 0.00298801 1.63137e+07 50.1589 0.0115619 0.994422 0 50.1942 GTEX-11NSD-0826-SM-5986S 1 B1 2 pieces, glandular hyperplastic pattern 7.5 Prostate Prostate 0002367 91 1045 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.9802 220553 0.964129 0.986125 0.750988 24668 1 76 0.00284284 129 0 6.61224e+07 0.035625 403065 6.70527e+07 1.49357e+07 24694 3.27886e+07 0 0.213141 0.986125 0.740568 6.61224e+07 0.0073132 1.44789e+07 7.82362e+06 1.45507e+07 140 1.46741e+07 8.93366e+06 0.00506459 1.47224e+07 50.0821 0.00601116 0.99205 0 50.1236 GTEX-11NSD-0926-SM-5N9DR 0 B1 2 pieces, fibroadipose tisue; no ductal elements noted 5.9 Breast Breast - Mammary Tissue 0008367 95 1041 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991859 180914 0.974362 0.992717 0.824241 23122 1 76 0.00280851 168 0 7.56584e+07 0.0253834 851449 7.62135e+07 3.49742e+06 23143 3.76784e+07 0 0.15012 0.992717 0.818238 7.56584e+07 0.0033489 1.66821e+07 6.97381e+06 1.67362e+07 191 1.66388e+07 1.21908e+07 0.00307847 1.68458e+07 50.3091 0.0111719 0.993574 0 50.0808 GTEX-11NSD-1026-SM-5N9BE 1 B1 2 pieces, sprematogenesis is present 7.2 Testis Testis 0000473 97 1039 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991413 249287 0.93136 0.992242 0.738538 32740 1 76 0.00281127 176 0 8.39223e+07 0.0683322 1.17828e+06 8.45785e+07 3.76215e+06 32797 4.18208e+07 0 0.192821 0.992242 0.732809 8.39223e+07 0.00320621 1.75076e+07 1.14788e+07 1.75567e+07 184 1.75386e+07 1.34143e+07 0.00300857 1.75863e+07 50.068 0.0139312 0.993071 0 50.07 GTEX-11NSD-1126-SM-5N9BQ 1 B1 6 pieces; squamous mucosa is ~10% thickness 10 Esophagus Esophagus - Mucosa 0006920 104 1032 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.992174 162045 0.976626 0.993088 0.832858 22203 1 76 0.00286756 170 0 8.09477e+07 0.0229842 388072 8.15111e+07 3.69848e+06 22220 4.03371e+07 0 0.143768 0.993088 0.827101 8.09477e+07 0.00334089 1.82916e+07 1.06724e+07 1.8331e+07 182 1.82925e+07 1.69168e+07 0.00310401 1.84035e+07 50.1513 0.00476097 0.994002 0 50.0538 GTEX-11NSD-1226-SM-5986Q 1 B1 6 pieces, all muscularis; focal stromal connective tissue 8.3 Esophagus Esophagus - Muscularis 0004648 105 1031 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986639 261059 0.976025 0.990759 0.826769 22265 1 76 0.00261226 166 0 7.29426e+07 0.0236983 635513 7.3623e+07 1.68854e+07 22281 3.62455e+07 0 0.149255 0.990759 0.819129 7.29426e+07 0.00593928 1.57376e+07 7.19193e+06 1.5695e+07 166 1.57437e+07 1.24772e+07 0.00426885 1.59634e+07 50.3464 0.00863199 0.994879 0 49.9323 GTEX-11NSD-1426-SM-5HL67 1 B1 6 pieces, well- preserved mucosa is ~1mm, ~25% thickness 6.4 Stomach Stomach 0000945 114 1022 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.976084 170154 0.983679 0.978584 0.875789 20620 1 76 0.00244058 314 0 6.57642e+07 0.0150249 839773 6.72035e+07 7.53527e+06 20629 3.26804e+07 0 0.10789 0.978584 0.857033 6.57642e+07 0.00368832 1.51855e+07 1.00999e+08 1.55907e+07 217 1.55885e+07 1.84321e+07 0.00306286 1.5354e+07 49.6211 0.012496 0.981085 0 50.6583 GTEX-11NSD-1626-SM-5986U 1 B1 6 pieces, well preserved mucosa is ~0.4mm thick, ~15% thickness 8.1 Colon Colon - Transverse 0001157 128 1008 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98514 226069 0.974037 0.989668 0.804781 23783 1 76 0.00276042 144 0 6.75983e+07 0.0255047 780222 6.83041e+07 1.50635e+07 23813 3.35654e+07 0 0.169256 0.989668 0.796466 6.75983e+07 0.00637084 1.49519e+07 8.43267e+06 1.48204e+07 153 1.48844e+07 1.03842e+07 0.00455737 1.51658e+07 50.4682 0.0114228 0.994196 0 49.7791 GTEX-11NSD-1726-SM-5N9C3 1 B1 6 pieces, unusually abundant and well preserved lymphoid aggregates are ~50% total specimen. 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 136 1000 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991914 194812 0.964493 0.992867 0.758047 24413 1 76 0.00311044 136 0 6.9612e+07 0.0348653 322759 7.01121e+07 3.3178e+06 24443 3.46604e+07 0 0.206446 0.992867 0.75264 6.9612e+07 0.00365684 1.53457e+07 7.27537e+06 1.53945e+07 147 1.53751e+07 1.12544e+07 0.00338338 1.54306e+07 50.09 0.00460347 0.993819 0 50.0793 GTEX-11NSD-1826-SM-5N9CF 0 B1 2 pieces, good clean specimens, minimal adherent fat 7.9 Nerve Nerve - Tibial 0001323 288 848 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990746 189986 0.96784 0.991701 0.76129 23783 1 76 0.00282003 170 0 7.58589e+07 0.0319074 224186 7.64937e+07 3.88391e+06 23813 3.77857e+07 0 0.20655 0.991701 0.754972 7.58589e+07 0.0033589 1.66978e+07 6.26109e+06 1.67947e+07 167 1.67576e+07 1.23636e+07 0.0030892 1.68063e+07 50.0725 0.00293078 0.992657 0 50.1446 GTEX-11NSD-2026-SM-5HL5U 0 B1 2 pieces, minimal interstitial fat 8.5 Muscle Muscle - Skeletal 0011907 288 848 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992205 233647 0.982248 0.994131 0.885853 18216 1 76 0.00188384 164 0 7.04498e+07 0.0175576 1.10455e+06 7.08657e+07 8.25882e+06 18218 3.50951e+07 0 0.0963945 0.994131 0.880655 7.04498e+07 0.00280826 1.53851e+07 1.33396e+07 1.54088e+07 174 1.53663e+07 1.51893e+07 0.00234516 1.55575e+07 50.3091 0.0155866 0.996058 0 50.0385 GTEX-11NSD-2226-SM-5986V 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 287 849 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985215 304818 0.971754 0.989958 0.755475 24355 1 76 0.00271897 201 0 7.68027e+07 0.0280497 1.01876e+06 7.75817e+07 1.53478e+07 24378 3.81303e+07 0 0.216279 0.989958 0.747889 7.68027e+07 0.00667368 1.676e+07 9.89341e+06 1.68026e+07 166 1.69021e+07 1.14291e+07 0.00468685 1.70028e+07 50.1485 0.0131314 0.994701 0 50.0635 GTEX-11NUK-0004-SM-58Q87 B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11NUK-0004-SM-5DWSZ B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11NUK-0004-SM-6WBTU B1 Blood Whole Blood 0013756 794 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11NUK-0005-SM-5MR5F B1 9.1 Blood Whole Blood 0013756 794 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.970113 407640 0.978933 0.97058 0.787983 19191 1 76 0.00295761 117 0 8.9086e+07 0.0202724 145815 9.17863e+07 3.92267e+06 19208 4.44004e+07 0 0.19095 0.97058 0.7648 8.9086e+07 0.00297858 2.06546e+07 1.18724e+08 2.09941e+07 145 2.09636e+07 2.30987e+07 0.00296809 2.07176e+07 49.7049 0.00158864 0.971047 0 50.4075 GTEX-11NUK-0008-SM-5Q5B9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 887 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991672 263962 0.976715 0.994118 0.864996 20241 1 76 0.00152711 149 0 6.40996e+07 0.022911 179615 6.44788e+07 4.922e+06 20252 3.1901e+07 0 0.111719 0.994118 0.859908 6.40996e+07 0.00242995 1.43097e+07 7.72441e+06 1.4361e+07 146 1.43834e+07 1.55414e+07 0.00197742 1.44439e+07 50.1049 0.00278564 0.996564 0 50.0895 GTEX-11NUK-0011-R4a-SM-DO12B B1, A1 7.1 Brain Brain - Amygdala 0001876 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988422 540787 0.965471 0.992366 0.865129 23131 1 76 0.00218066 269 0 8.8895e+07 0.0341508 6.61134e+06 8.95788e+07 9.11609e+06 23141 4.41766e+07 0 0.100342 0.992366 0.858525 8.8895e+07 0.00411824 1.9329e+07 2.0175e+07 1.98351e+07 320 1.98014e+07 9.44505e+06 0.0031456 1.96543e+07 49.8135 0.0738047 0.99631 0 50.6461 GTEX-11NUK-0011-R5a-SM-DO93N B1, A1 9.2 Brain Brain - Caudate (basal ganglia) 0001873 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994999 680521 0.966724 0.995756 0.843561 24033 1 76 0.00177405 271 0 1.06166e+08 0.0329354 7.237e+06 1.06618e+08 6.05648e+06 24054 5.29281e+07 0 0.123163 0.995756 0.839981 1.06166e+08 0.00209668 2.31065e+07 2.62574e+07 2.35895e+07 330 2.34758e+07 1.17151e+07 0.00193524 2.32974e+07 49.8092 0.0678776 0.996513 0 50.5171 GTEX-11NUK-0011-R6a-SM-DO93O B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994291 936316 0.96424 0.995229 0.849639 24456 1 76 0.00181477 375 0 1.07637e+08 0.0353681 7.23119e+06 1.08153e+08 6.32979e+06 24481 5.36316e+07 0 0.114601 0.995229 0.845585 1.07637e+08 0.00221159 2.34087e+07 2.20156e+07 2.39792e+07 351 2.3915e+07 1.39445e+07 0.00201299 2.35693e+07 49.636 0.0668609 0.996167 0 50.6019 GTEX-11NUK-0011-R7a-SM-DO93P B1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 864 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993915 783490 0.967445 0.994919 0.846977 23572 1 76 0.00179974 372 0 1.13391e+08 0.0323197 9.139e+06 1.1397e+08 6.72561e+06 23590 5.65066e+07 0 0.120468 0.994919 0.842673 1.13391e+08 0.00241755 2.46885e+07 2.99502e+07 2.51448e+07 376 2.49811e+07 1.12041e+07 0.00210833 2.49516e+07 49.9705 0.0801876 0.995923 0 50.4578 GTEX-11NUK-0126-SM-5A5L3 1 B1 6 pieces, include internal and attached adipose tissue up to 40%, squamous epithelium measures ~40 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 894 887 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990547 246264 0.969172 0.992951 0.764937 25518 1 76 0.00210355 212 0 8.56385e+07 0.0305984 623718 8.62464e+07 1.00996e+07 25558 4.26222e+07 0 0.204235 0.992951 0.759546 8.56385e+07 0.00394323 1.87802e+07 1.03176e+07 1.89259e+07 231 1.89521e+07 1.34322e+07 0.00302116 1.89408e+07 49.9851 0.00723182 0.995356 0 50.1931 GTEX-11NUK-0226-SM-5A5L4 1 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 895 886 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.992187 191759 0.98381 0.994361 0.875332 19183 1 76 0.00171576 198 0 7.51208e+07 0.0159713 947934 7.55467e+07 9.47973e+06 19190 3.74202e+07 0 0.108478 0.994361 0.870396 7.51208e+07 0.00346944 1.63783e+07 9.43646e+06 1.63617e+07 205 1.63378e+07 1.56973e+07 0.00259068 1.65477e+07 50.319 0.0125476 0.996536 0 49.9745 GTEX-11NUK-0326-SM-5HL5K 1 B1 2 pieces, includes portion of nerve and small fragment of skeletal muscle 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 895 887 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806,LCSET-5073 03/04/2014 TruSeq.v1 RNASEQ 0.985779 289087 0.971641 0.99072 0.761029 25368 1 76 0.00223157 217 0 1.10575e+08 0.0281309 503271 1.1161e+08 1.49526e+07 25425 5.4948e+07 0 0.210612 0.99072 0.753967 1.10575e+08 0.00316702 2.42616e+07 1.18109e+07 2.43691e+07 238 2.44346e+07 1.47399e+07 0.00269696 2.46463e+07 50.2157 0.00450918 0.99566 0 50.1106 GTEX-11NUK-0426-SM-5HL5V 1 B1 2 pieces, includes 10 and 30% attached fat 6.5 Nerve Nerve - Tibial 0001323 902 880 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990513 236017 0.965355 0.992481 0.747576 24154 1 76 0.00212044 173 0 7.74327e+07 0.0343554 459886 7.80193e+07 8.05912e+06 24188 3.85418e+07 0 0.217779 0.992481 0.741954 7.74327e+07 0.00311415 1.69671e+07 8.00472e+06 1.71326e+07 184 1.71116e+07 1.13437e+07 0.00261631 1.71327e+07 50.0308 0.00589452 0.994449 0 50.2427 GTEX-11NUK-0526-SM-5A5L5 1 B1 2 pieces, some intimal thickening, 1.1mm attachment of fat 6 Blood Vessel Artery - Tibial 0007610 903 880 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990884 213458 0.971527 0.993088 0.78903 21769 1 76 0.00207582 134 0 6.42719e+07 0.0281295 369151 6.47192e+07 6.95707e+06 21792 3.19808e+07 0 0.182496 0.993088 0.783577 6.42719e+07 0.0039331 1.37896e+07 5.50098e+06 1.3936e+07 146 1.39358e+07 1.07363e+07 0.0030024 1.39194e+07 49.9705 0.00570389 0.995292 0 50.264 GTEX-11NUK-0726-SM-5A5ME 0 B1 6 pieces, intimal thickening, attached adventitia with fat, nerve, and focal collection of lymphocytes 7.8 Blood Vessel Artery - Aorta 0001496 949 835 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989722 359402 0.974228 0.99205 0.767138 23463 1 76 0.00222583 208 0 8.82214e+07 0.0252838 205464 8.89284e+07 1.05426e+07 23495 4.38677e+07 0 0.20709 0.99205 0.76104 8.82214e+07 0.00407798 1.90693e+07 7.57845e+06 1.93012e+07 205 1.93477e+07 1.53796e+07 0.00314973 1.92172e+07 49.8308 0.00231044 0.994378 0 50.3022 GTEX-11NUK-0826-SM-5HL4U 1 B1 2 pieces, includes pleura (target is 1 cm below pleura), numerous hemosiderin-laden macrophages, some congestion 7.4 Lung Lung 0008952 950 834 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991003 244193 0.970939 0.993049 0.734825 24826 1 76 0.00241877 208 0 8.57467e+07 0.0286021 366924 8.6347e+07 9.3073e+06 24871 4.26699e+07 0 0.236114 0.993049 0.729717 8.57467e+07 0.00327646 1.89329e+07 8.85373e+06 1.90678e+07 216 1.90741e+07 1.31843e+07 0.00284673 1.90908e+07 50.022 0.00424941 0.995095 0 50.1775 GTEX-11NUK-0926-SM-5HL57 0 B1 2 pieces, one piece is ~20% fat, 2nd ~5% fat 6.3 Heart Heart - Atrial Appendage 0006631 951 833 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988386 233438 0.976134 0.991304 0.777337 22735 1 76 0.00204422 151 0 7.05042e+07 0.0236269 1.63106e+06 7.11227e+07 8.16519e+06 22761 3.50432e+07 0 0.198796 0.991304 0.770578 7.05042e+07 0.00340385 1.54557e+07 1.03639e+07 1.54387e+07 182 1.53725e+07 9.32121e+06 0.00272204 1.57168e+07 50.5537 0.0229331 0.994223 0 49.9725 GTEX-11NUK-1026-SM-5HL5J 2 B1 1 piece; minute fragment of fat/stroma 6.6 Thyroid Thyroid 0002046 952 833 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989893 239627 0.966308 0.992202 0.739278 24665 1 76 0.00217252 158 0 7.61627e+07 0.033403 463598 7.67612e+07 8.88998e+06 24703 3.78857e+07 0 0.227029 0.992202 0.733514 7.61627e+07 0.00312751 1.67264e+07 8.2964e+06 1.67666e+07 174 1.67751e+07 1.08855e+07 0.0026489 1.6887e+07 50.1661 0.00603948 0.994512 0 50.0601 GTEX-11NUK-1226-SM-5P9GM 1 B1 2 pieces, includes capsule (target is 1 cm below capsule), few collections of lymphocytes, often in portal tracts 6.1 Liver Liver 0001114 956 829 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990075 324658 0.971098 0.990563 0.773318 22368 1 76 0.00288176 369 0 1.05509e+08 0.0287682 1.6549e+06 1.06514e+08 3.56031e+06 22399 5.2508e+07 0 0.19778 0.990563 0.76602 1.05509e+08 0.00358178 2.28243e+07 2.18905e+07 2.33735e+07 346 2.31983e+07 1.2904e+07 0.0032316 2.30422e+07 49.8312 0.015537 0.991052 0 50.5944 GTEX-11NUK-1326-SM-5P9GN 1 B1 6 pieces, epithelium partially sloughing, some submucosal glands 6.5 Esophagus Esophagus - Mucosa 0006920 961 825 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991066 283273 0.97147 0.991523 0.806155 23218 1 76 0.00295763 269 0 9.56598e+07 0.0282897 924619 9.64777e+07 3.13525e+06 23242 4.76344e+07 0 0.165315 0.991523 0.799321 9.56598e+07 0.00366195 2.14372e+07 1.25844e+07 2.16127e+07 300 2.15416e+07 1.41466e+07 0.00330963 2.15597e+07 50.0209 0.00958376 0.99198 0 50.2038 GTEX-11NUK-1426-SM-5HL68 1 B1 6 pieces, 2 pieces include ~30% fat, vessels, and nerve 6.1 Esophagus Esophagus - Muscularis 0004648 962 824 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988286 274056 0.967701 0.99096 0.810351 22699 1 76 0.00216 186 0 7.11141e+07 0.0321606 1.79087e+06 7.17629e+07 7.1687e+06 22717 3.53465e+07 0 0.15735 0.99096 0.803025 7.11141e+07 0.00361208 1.54854e+07 1.03272e+07 1.54925e+07 215 1.53846e+07 7.5422e+06 0.00288408 1.57741e+07 50.6249 0.0249553 0.993634 0 50.0115 GTEX-11NUK-1726-SM-5A5L2 1 B1 6 pieces, small attachment of fat and nerve 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 973 815 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988596 271025 0.969254 0.991315 0.820414 22370 1 76 0.00202136 263 0 8.11154e+07 0.0305743 1.94169e+06 8.18261e+07 9.04546e+06 22392 4.03409e+07 0 0.14884 0.991315 0.813289 8.11154e+07 0.00424953 1.76297e+07 9.53659e+06 1.77018e+07 257 1.7618e+07 9.59015e+06 0.00313239 1.79179e+07 50.422 0.0237295 0.994033 0 50.1019 GTEX-11NUK-2026-SM-5PNVZ 1 B1 2 pieces, central defects in 1 piece (?poor fixation) 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 982 807 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990005 201824 0.974493 0.992338 0.799824 23170 1 76 0.00206585 156 0 6.71185e+07 0.0252369 666479 6.76367e+07 6.00746e+06 23189 3.33835e+07 0 0.17467 0.992338 0.793696 6.71185e+07 0.00320109 1.4724e+07 7.51262e+06 1.50106e+07 176 1.49549e+07 9.3288e+06 0.00263214 1.49305e+07 49.9592 0.0098538 0.994672 0 50.482 GTEX-11NUK-2426-SM-5BC4U 2 B1 6 pieces, mucosa and muscularis 6.1 Stomach Stomach 0000945 994 796 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.970665 261868 0.977916 0.975498 0.805208 20971 1 76 0.00304695 213 0 6.47444e+07 0.0217899 1.09654e+06 6.63706e+07 1.65649e+07 20985 3.2089e+07 0 0.172708 0.975498 0.785479 6.47444e+07 0.00562403 1.46282e+07 2.22735e+07 1.44988e+07 174 1.45359e+07 9.51496e+06 0.00432911 1.48852e+07 50.5938 0.0165215 0.980331 0 49.778 GTEX-11NUK-2626-SM-5A5MB 2 B1 1 piece, fragmented; testis 6.3 Testis Testis 0000473 1001 790 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.989184 293030 0.92172 0.991544 0.719898 32865 1 76 0.00208301 149 0 7.46096e+07 0.0779622 905064 7.52458e+07 9.08139e+06 32923 3.71343e+07 0 0.201822 0.991544 0.713811 7.46096e+07 0.00375251 1.53177e+07 1.16233e+07 1.53571e+07 159 1.53968e+07 1.11233e+07 0.00291577 1.54325e+07 50.0579 0.0120281 0.993905 0 50.0643 GTEX-11NUK-2726-SM-5A5MC 1 B1 6 pieces, up to 40% attached subcutaneous fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1003 789 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.988482 272087 0.973007 0.991414 0.76199 24015 1 76 0.00210992 146 0 7.01318e+07 0.0267737 418686 7.07392e+07 8.55639e+06 24043 3.48765e+07 0 0.211017 0.991414 0.755448 7.01318e+07 0.00407438 1.5393e+07 8.67438e+06 1.55355e+07 163 1.55667e+07 1.05552e+07 0.00308925 1.55542e+07 49.9799 0.00591873 0.994346 0 50.2305 GTEX-11NUK-2926-SM-5A5MD 1 B1 2 pieces 7.1 Brain Brain - Cortex 0001870 1040 752 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.991414 355721 0.96652 0.993444 0.827071 24480 1 76 0.00198431 268 0 9.07881e+07 0.0330548 3.33166e+06 9.13872e+07 1.03852e+07 24501 4.52035e+07 0 0.139449 0.993444 0.821649 9.07881e+07 0.00368022 2.00172e+07 1.39557e+07 2.00138e+07 284 1.99949e+07 1.12456e+07 0.00283053 2.02056e+07 50.2621 0.0364565 0.995475 0 49.9958 GTEX-11NUK-3026-SM-5986K 1 B1 2 pieces (fragmented) 6.9 Brain Brain - Cerebellum 0002037 1042 751 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982714 416731 0.94665 0.988334 0.731077 23883 1 76 0.00292773 125 0 7.58743e+07 0.0529759 1.1051e+06 7.67699e+07 1.62885e+07 23906 3.76199e+07 0 0.215573 0.988334 0.722549 7.58743e+07 0.00756041 1.63623e+07 1.64162e+07 1.63701e+07 160 1.65258e+07 9.22611e+06 0.0052309 1.65938e+07 50.1026 0.014395 0.993954 0 50.0118 GTEX-11NUK-3126-SM-5986M 1 B1 2 pieces, adenohypophysis 6.4 Pituitary Pituitary 0000007 1047 746 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981921 328847 0.959179 0.987379 0.764534 25822 1 76 0.00278368 131 0 7.41633e+07 0.0405929 716611 7.51113e+07 1.83576e+07 25860 3.67935e+07 0 0.194645 0.987379 0.754885 7.41633e+07 0.006303 1.6103e+07 1.29062e+07 1.62299e+07 164 1.63556e+07 1.01334e+07 0.00453362 1.63582e+07 50.0041 0.00954066 0.992837 0 50.1962 GTEX-11NV4-0001-SM-58Q86 B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11NV4-0001-SM-5DWSY B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11NV4-0001-SM-6WBTT B1 Blood Whole Blood 0013756 867 BP-39723 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/07/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11NV4-0005-SM-5N9EX B1 8.8 Blood Whole Blood 0013756 868 BP-39727 RNA isolation_PAXgene Blood RNA (Manual) 06/07/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987476 1.01016e+06 0.95998 0.988986 0.717328 22672 1 76 0.00479788 211 0 1.10809e+08 0.0393499 192758 1.12043e+08 5.64536e+06 22714 5.50218e+07 0 0.242652 0.988986 0.709427 1.10809e+08 0.00486463 2.44951e+07 4.80493e+07 2.45749e+07 212 2.46119e+07 1.91433e+07 0.0048312 2.4645e+07 50.0336 0.00172039 0.990497 0 50.0813 GTEX-11NV4-0008-SM-5Q5BA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1459 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99234 410037 0.974306 0.994002 0.863844 19194 1 76 0.00160138 136 0 6.08821e+07 0.025336 203767 6.12495e+07 4.04489e+06 19202 3.03236e+07 0 0.110462 0.994002 0.858662 6.08821e+07 0.00251049 1.35553e+07 1.10651e+07 1.3608e+07 131 1.36008e+07 1.61195e+07 0.00205518 1.36744e+07 50.135 0.00332684 0.995664 0 50.0969 GTEX-11NV4-0011-R5a-SM-5NQ88 B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991382 479872 0.957934 0.99289 0.820301 23259 1 76 0.00204992 268 0 7.59291e+07 0.0417913 5.12339e+06 7.64728e+07 6.19327e+06 23273 3.78307e+07 0 0.137632 0.99289 0.814469 7.59291e+07 0.00284001 1.63736e+07 2.6929e+07 1.66101e+07 265 1.6516e+07 7.74034e+06 0.00244436 1.65849e+07 50.1041 0.0669963 0.994399 0 50.3584 GTEX-11NV4-0011-R6a-SM-57WD5 B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990174 617159 0.961019 0.993122 0.847664 23344 1 76 0.00196695 269 0 8.39022e+07 0.0385987 5.42477e+06 8.44833e+07 1.03214e+07 23362 4.17327e+07 0 0.113355 0.993122 0.841833 8.39022e+07 0.00391745 1.84114e+07 2.22882e+07 1.83582e+07 301 1.83336e+07 1.02345e+07 0.0029393 1.8656e+07 50.4358 0.0642112 0.99607 0 49.9277 GTEX-11NV4-0011-R7a-SM-57WDH B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 790 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990919 578898 0.957086 0.993217 0.835847 22923 1 76 0.00199165 267 0 7.19695e+07 0.0426321 4.64879e+06 7.24611e+07 8.99946e+06 22935 3.58243e+07 0 0.121238 0.993217 0.830178 7.19695e+07 0.00364498 1.5706e+07 2.08641e+07 1.57519e+07 257 1.56556e+07 7.50402e+06 0.0028164 1.59495e+07 50.4649 0.0641557 0.995515 0 50.0729 GTEX-11NV4-0326-SM-5HL58 1 B1 2 pieces, minimal internal fat 7.5 Muscle Muscle - Skeletal 0011907 1020 727 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992678 276255 0.979877 0.994568 0.877647 19371 1 76 0.0018497 268 0 9.07219e+07 0.0198631 1.11672e+06 9.12174e+07 9.77122e+06 19379 4.51922e+07 0 0.10223 0.994568 0.87288 9.07219e+07 0.00277986 1.93405e+07 2.10064e+07 1.9661e+07 264 1.95029e+07 1.89221e+07 0.0023139 1.96566e+07 50.1963 0.0122424 0.996459 0 50.4109 GTEX-11NV4-0526-SM-5N9BF 1 B1 2 pieces, excellent specimen, some intimal thickening and small focus of medial calcification 8 Blood Vessel Artery - Tibial 0007610 1039 709 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993425 126110 0.976389 0.994141 0.849611 20932 1 76 0.00270743 167 0 8.04995e+07 0.0231565 370046 8.09739e+07 3.51526e+06 20944 4.01038e+07 0 0.126779 0.994141 0.844633 8.04995e+07 0.00319668 1.71838e+07 5.98075e+06 1.72837e+07 190 1.72132e+07 1.65195e+07 0.00295188 1.73126e+07 50.144 0.00456994 0.994858 0 50.1449 GTEX-11NV4-0626-SM-5N9BR 2 B1 2 pieces, Hashimoto's thyroiditis with atypical lymphoid infiltrate 6.1 Thyroid Thyroid 0002046 1097 652 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.987115 337185 0.954308 0.987731 0.708674 25820 1 76 0.00371823 159 0 8.17488e+07 0.043807 233778 8.27642e+07 3.86082e+06 25868 4.06047e+07 0 0.245634 0.987731 0.69998 8.17488e+07 0.00422291 1.78977e+07 1.97983e+07 1.79471e+07 172 1.79093e+07 1.04089e+07 0.00397041 1.79969e+07 50.122 0.00282463 0.988347 0 50.0689 GTEX-11NV4-0826-SM-5BC4S 1 B1 2 pieces, 1 piece is 60% fat 6.7 Heart Heart - Atrial Appendage 0006631 1121 630 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98716 300157 0.973541 0.991756 0.81218 23063 1 76 0.00269315 157 0 7.8444e+07 0.0262075 2.5674e+06 7.90961e+07 2.17527e+07 23086 3.89446e+07 0 0.161361 0.991756 0.805484 7.8444e+07 0.00523354 1.69846e+07 1.04121e+07 1.69801e+07 199 1.70443e+07 1.15178e+07 0.00395745 1.72453e+07 50.2931 0.0324593 0.996351 0 49.9932 GTEX-11NV4-1126-SM-5HL6J 1 B1 2 pieces 7.1 Lung Lung 0008952 1135 618 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990283 210347 0.971478 0.99255 0.782477 22150 1 76 0.00261204 143 0 6.69273e+07 0.0279974 270587 6.74296e+07 7.07219e+06 22171 3.32743e+07 0 0.189002 0.99255 0.776647 6.69273e+07 0.00368918 1.46996e+07 1.06147e+07 1.47888e+07 157 1.47702e+07 1.05543e+07 0.00314938 1.48664e+07 50.1622 0.00401288 0.994817 0 50.1511 GTEX-11NV4-1326-SM-5HL6V 1 B1 2 pieces, includes capsule (target is 1 cm below capsule), micro and macrovesicular steatosis 5.9 Liver Liver 0001114 1152 602 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98977 657678 0.948985 0.991899 0.776741 22472 1 76 0.00219751 267 0 9.3782e+07 0.0508604 2.91383e+06 9.45479e+07 1.04418e+07 22495 4.66826e+07 0 0.172245 0.991899 0.770449 9.3782e+07 0.00314901 2.00372e+07 3.87701e+07 2.03187e+07 320 2.02379e+07 1.06584e+07 0.00267224 2.03094e+07 50.0882 0.0308186 0.994029 0 50.3487 GTEX-11NV4-1426-SM-5BC4W 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1157 598 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986335 250932 0.970963 0.99042 0.76317 23163 1 76 0.0029084 131 0 5.76459e+07 0.0287135 280060 5.82035e+07 1.36543e+07 23185 2.86006e+07 0 0.207793 0.99042 0.755858 5.76459e+07 0.00535846 1.25757e+07 7.25219e+06 1.27677e+07 136 1.28004e+07 8.78787e+06 0.00412838 1.27696e+07 49.9399 0.00481174 0.994503 0 50.3789 GTEX-11NV4-1726-SM-5N9FC 2 B1 2 pieces, spermatogenesis is present 5.7 Testis Testis 0000473 1175 583 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987813 387065 0.914713 0.989322 0.706996 33805 1 76 0.00405283 183 0 9.00534e+07 0.0849252 689252 9.10254e+07 4.75933e+06 33869 4.47782e+07 0 0.207717 0.989322 0.699446 9.00534e+07 0.00400913 1.81804e+07 1.50684e+07 1.82498e+07 170 1.82801e+07 1.46256e+07 0.00403102 1.8276e+07 49.9944 0.00757208 0.99083 0 50.0954 GTEX-11NV4-1926-SM-5N9D4 1 B1 4 pieces, excellent specimen with small portion of fat/stroma 8.2 Salivary Gland Minor Salivary Gland 0006330 1191 569 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989032 164469 0.972758 0.990257 0.789045 23156 1 76 0.00315218 167 0 6.86613e+07 0.0255722 131188 6.93368e+07 3.17967e+06 23184 3.41492e+07 0 0.183712 0.990257 0.781358 6.86613e+07 0.00356823 1.56253e+07 1.53226e+07 1.57273e+07 157 1.57221e+07 1.18699e+07 0.00335995 1.57125e+07 49.9849 0.00189204 0.991482 0 50.1627 GTEX-11NV4-2026-SM-5N9DG 0 B1 2 pieces, ~10% fibrous 5.8 Breast Breast - Mammary Tissue 0008367 1198 563 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990878 161423 0.975598 0.991866 0.784888 23512 1 76 0.00307119 172 0 7.77181e+07 0.0240163 464741 7.83554e+07 3.92004e+06 23539 3.86798e+07 0 0.19071 0.991866 0.778504 7.77181e+07 0.00361038 1.71697e+07 7.96772e+06 1.72138e+07 182 1.71653e+07 1.25161e+07 0.00334052 1.72926e+07 50.1847 0.00593119 0.992854 0 50.0642 GTEX-11NV4-2126-SM-5N9DS 1 B1 2 pieces 5.8 Brain Brain - Cortex 0001870 1269 492 BP-43989 RNA Extraction from Paxgene-derived Lysate Plate Based 09/26/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.993147 211152 0.971355 0.994113 0.855738 21574 1 76 0.00269134 198 0 6.56795e+07 0.0282989 4.31810e+06 6.60685e+07 2.97521e+06 21585 3.27206e+07 0 0.115617 0.994113 0.850701 6.56795e+07 0.00317788 1.43505e+07 1.92889e+07 1.45056e+07 215 1.43261e+07 6.85852e+06 0.00293437 1.45796e+07 50.4384 0.065358 0.99508 0 50.2687 GTEX-11NV4-2226-SM-5BC4T 1 B1 2 pieces, attached portion of meninges 6.9 Brain Brain - Cerebellum 0002037 1269 500 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983969 414838 0.947288 0.989235 0.710741 23267 1 76 0.002991 124 0 6.41872e+07 0.0523906 963362 6.48857e+07 1.69296e+07 23286 3.18056e+07 0 0.236547 0.989235 0.70309 6.41872e+07 0.0058996 1.37755e+07 8.42188e+06 1.39435e+07 145 1.40443e+07 7.65545e+06 0.00443756 1.39847e+07 49.8937 0.0148471 0.994501 0 50.303 GTEX-11NV4-2326-SM-5BC4X 1 B1 2 pieces, adenophypophysis 6.8 Pituitary Pituitary 0000007 1272 497 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986144 337980 0.959232 0.990718 0.77487 25406 1 76 0.00286548 150 0 7.41225e+07 0.0405252 450207 7.48169e+07 2.119e+07 25441 3.67892e+07 0 0.184362 0.990718 0.767678 7.41225e+07 0.00530892 1.55277e+07 9.83908e+06 1.57614e+07 166 1.58428e+07 1.14061e+07 0.00408156 1.5762e+07 49.8721 0.00601745 0.995293 0 50.3734 GTEX-11O72-0006-SM-5O9DB C1 7.1 Blood Whole Blood 0013756 867 BP-39787 RNA isolation_PAXgene Blood RNA (Manual) 06/11/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.971684 671300 0.976595 0.974832 0.793332 18925 1 76 0.00408774 153 0 1.14881e+08 0.022533 479008 1.17846e+08 5.14552e+06 18935 5.70166e+07 0 0.183263 0.974832 0.773366 1.14881e+08 0.00560427 2.60163e+07 1.29435e+08 2.67014e+07 179 2.67324e+07 2.68804e+07 0.00484356 2.63717e+07 49.6604 0.00406468 0.97798 0 50.6497 GTEX-11O72-0008-SM-5Q5DN C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 923 BP-40621 RNA isolation_Trizol Manual (Cell Pellet) 07/10/2013 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.993056 292744 0.9798 0.995108 0.871523 20270 1 76 0.00182943 179 0 8.33366e+07 0.0198727 305596 8.37463e+07 1.1584e+07 20279 4.15079e+07 0 0.108277 0.995108 0.867259 8.33366e+07 0.0030568 1.86428e+07 1.14372e+07 1.87464e+07 190 1.87597e+07 2.21301e+07 0.00244185 1.8801e+07 50.055 0.00364907 0.997161 0 50.1386 GTEX-11O72-0011-R5a-SM-DO922 C1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 867 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994516 743255 0.966611 0.995251 0.837875 23908 1 76 0.00224458 372 0 1.14756e+08 0.0331467 1.06635e+07 1.15303e+08 5.71255e+06 23926 5.72273e+07 0 0.128735 0.995251 0.833896 1.14756e+08 0.00249311 2.47659e+07 3.69198e+07 2.54682e+07 337 2.53271e+07 1.08876e+07 0.00236875 2.49861e+07 49.6612 0.092482 0.995986 0 50.699 GTEX-11O72-0011-R6a-SM-DNZZQ C1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 867 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987778 795142 0.961764 0.991757 0.840652 24261 1 76 0.0027773 372 0 1.16076e+08 0.0380398 1.15818e+07 1.1704e+08 1.1597e+07 24283 5.76707e+07 0 0.121111 0.991757 0.833723 1.16076e+08 0.00475509 2.50129e+07 3.20154e+07 2.56548e+07 335 2.56546e+07 1.001e+07 0.00376223 2.53955e+07 49.7462 0.0989558 0.995735 0 50.6334 GTEX-11O72-0126-SM-59887 0 C1 6 pieces; well; trimmed; contains 10% internal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 922 983 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986575 245139 0.975661 0.990244 0.795294 24024 1 76 0.00278101 158 0 7.35442e+07 0.0240372 331860 7.42687e+07 1.49753e+07 24046 3.65498e+07 0 0.180367 0.990244 0.787535 7.35442e+07 0.00607656 1.61136e+07 9.27752e+06 1.61439e+07 156 1.62201e+07 1.31603e+07 0.00442268 1.62928e+07 50.1118 0.00446837 0.993914 0 50.0469 GTEX-11O72-0226-SM-59869 0 C1 2 pieces; 1 piece is 60% fibrous, also contains a sweat gland (annotated); other has 10% fibrous tissue 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 925 981 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985041 210311 0.977546 0.989458 0.801832 22446 1 76 0.00286136 130 0 6.76959e+07 0.0221238 433293 6.84172e+07 1.44086e+07 22461 3.36186e+07 0 0.175714 0.989458 0.793379 6.76959e+07 0.00649273 1.50359e+07 8.28964e+06 1.49855e+07 147 1.50692e+07 1.13354e+07 0.00466894 1.52293e+07 50.2642 0.0063331 0.993875 0 49.9161 GTEX-11O72-0326-SM-5986D 1 C1 2 pieces; each has 30% internal fat 7.7 Muscle Muscle - Skeletal 0011907 946 961 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986766 268239 0.978917 0.991052 0.835102 20827 1 76 0.00251449 161 0 7.70792e+07 0.0208395 731026 7.77752e+07 1.62382e+07 20846 3.83005e+07 0 0.143814 0.991052 0.82763 7.70792e+07 0.00624142 1.68968e+07 8.22397e+06 1.68526e+07 165 1.6952e+07 1.57292e+07 0.00436989 1.71029e+07 50.2216 0.00939922 0.995337 0 49.9346 GTEX-11O72-0426-SM-5BC5B 1 C1 2 pieces; well trimmed 6.9 Blood Vessel Artery - Tibial 0007610 950 957 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986164 301276 0.977423 0.990689 0.791267 21165 1 76 0.00277512 154 0 7.71398e+07 0.0222389 537382 7.78648e+07 1.97889e+07 21182 3.82748e+07 0 0.186156 0.990689 0.783899 7.71398e+07 0.00513639 1.66808e+07 8.32285e+06 1.6846e+07 166 1.69004e+07 1.35742e+07 0.00395036 1.69618e+07 50.0906 0.00690148 0.995214 0 50.2463 GTEX-11O72-0526-SM-5Q5AO 0 C1 2 pieces; 1 has 40% internal & external fat; other has 10% internal & external fat 7.2 Nerve Nerve - Tibial 0001323 959 949 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989102 221945 0.973256 0.991203 0.74938 22361 1 76 0.00197813 126 0 5.69421e+07 0.0264463 116571 5.74474e+07 4.09975e+06 22379 2.83082e+07 0 0.223876 0.991203 0.742788 5.69421e+07 0.0031896 1.25184e+07 5.32184e+06 1.26268e+07 130 1.26115e+07 9.45908e+06 0.00258258 1.26541e+07 50.0843 0.00202918 0.993305 0 50.2157 GTEX-11O72-0626-SM-5PNYE 1 C1 6 pieces; well; trimmed; contains 10% internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 969 941 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991385 276502 0.976873 0.992054 0.787379 24102 1 76 0.00327624 217 0 9.12427e+07 0.0228847 491557 9.19735e+07 2.619e+06 24129 4.54311e+07 0 0.189494 0.992054 0.781123 9.12427e+07 0.00385265 2.0211e+07 9.61878e+06 2.03763e+07 208 2.03028e+07 1.55036e+07 0.00356425 2.03502e+07 50.0583 0.00534455 0.992723 0 50.2037 GTEX-11O72-0726-SM-5P9GO 1 C1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 973 937 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99122 323236 0.929329 0.991554 0.71401 34615 1 76 0.00310867 288 0 1.26653e+08 0.0703494 1.5222e+06 1.27732e+08 4.0828e+06 34698 6.3089e+07 0 0.215319 0.991554 0.70798 1.26653e+08 0.0036066 2.63585e+07 1.82357e+07 2.65149e+07 300 2.64911e+07 1.92005e+07 0.00335755 2.64238e+07 49.9364 0.0119171 0.991889 0 50.1479 GTEX-11O72-1026-SM-5986B 0 C1 2 pieces; 1 has 10% fat, other is 90% external fat; 6.2 Heart Heart - Atrial Appendage 0006631 983 929 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985631 204948 0.978948 0.990742 0.843564 20606 1 76 0.00286013 123 0 6.21803e+07 0.0204026 1.96380e+06 6.27613e+07 1.26463e+07 20616 3.08568e+07 0 0.135384 0.990742 0.835754 6.21803e+07 0.0070972 1.34552e+07 7.84956e+06 1.32603e+07 146 1.33231e+07 9.15627e+06 0.00496773 1.36721e+07 50.6464 0.0312901 0.995854 0 49.6352 GTEX-11O72-1126-SM-5N9E2 0 C1 2 pieces; 1 has patchy fibrous scars (annotated) <10% & internal fat 10% 5.7 Heart Heart - Left Ventricle 0006566 985 928 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988825 347726 0.982858 0.990673 0.827818 21787 1 76 0.00439166 368 0 1.08132e+08 0.0170036 8.04733e+06 1.0915e+08 5.46834e+06 21803 5.37597e+07 0 0.155041 0.990673 0.820097 1.08132e+08 0.00455504 2.40343e+07 2.37945e+07 2.42055e+07 340 2.42053e+07 1.02583e+07 0.0044732 2.42144e+07 50.0094 0.0737269 0.992522 0 50.1774 GTEX-11O72-1326-SM-5BC5A 2 C1 2 pieces; patchy alveolar hemorrhage, 20% 5.8 Lung Lung 0008952 988 926 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98264 294931 0.977491 0.988185 0.757336 23206 1 76 0.00300447 145 0 7.46103e+07 0.0221399 301904 7.55024e+07 2.21059e+07 23236 3.69551e+07 0 0.220155 0.988185 0.748388 7.46103e+07 0.00567507 1.64011e+07 9.99996e+06 1.66269e+07 161 1.67362e+07 1.17788e+07 0.00433228 1.66921e+07 49.9341 0.0039986 0.99373 0 50.3418 GTEX-11O72-1726-SM-DLIP2 2 C1 6 pieces; no sign of chronic disease Kidney Kidney - Cortex 0001225 994 922 BP-51581 DNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11O72-1726-SM-DMZ2Y 2 C1 6 pieces; no sign of chronic disease Kidney Kidney - Cortex 0001225 994 922 BP-51581 DNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11O72-1926-SM-5PNW1 1 C1 6 pieces; prominent (30 & 20%) submucosal fibrous tissue in 2 of 6 pieces (annotated) 6.2 Esophagus Esophagus - Muscularis 0004648 997 920 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.989849 132731 0.972996 0.991954 0.786799 22557 1 76 0.00217209 132 0 6.5521e+07 0.0267774 1.49665e+06 6.60525e+07 5.85411e+06 22574 3.26062e+07 0 0.186197 0.991954 0.780469 6.5521e+07 0.00326501 1.42885e+07 5.81805e+06 1.4423e+07 161 1.43866e+07 8.94851e+06 0.00271739 1.44585e+07 50.1247 0.0226585 0.99406 0 50.2343 GTEX-11O72-2026-SM-5N9G8 1 C1 6 pieces; prominent (20 & 25%) submucosal fibrous tissue in 2 of 6 pieces (annotated) 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 999 918 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987211 278820 0.969581 0.988161 0.773305 23752 1 76 0.00420046 203 0 9.01478e+07 0.0302167 1.96667e+06 9.12279e+07 4.60709e+06 23785 4.47487e+07 0 0.196275 0.988161 0.76415 9.01478e+07 0.00435346 1.97876e+07 8.38454e+06 1.98448e+07 227 1.97674e+07 1.17307e+07 0.00427689 1.99524e+07 50.2328 0.0215578 0.98911 0 50.0721 GTEX-11O72-2126-SM-5N9FO 1 C1 2 pieces; no mammary ducts, just fibroadipose tissue 5.7 Breast Breast - Mammary Tissue 0008367 1000 918 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986829 315530 0.975514 0.988102 0.800283 23589 1 76 0.00424147 206 0 9.05155e+07 0.024177 635203 9.16054e+07 4.55771e+06 23616 4.49442e+07 0 0.175231 0.988102 0.790761 9.05155e+07 0.0044319 1.9965e+07 1.01927e+07 2.00456e+07 222 1.99977e+07 1.36836e+07 0.00433656 2.01279e+07 50.1622 0.00693412 0.989375 0 50.1008 GTEX-11O72-2226-SM-5PNW2 3 C1 6 pieces; mucosa is totally autolyzed, but muscularis is OK (1) as is mucosal lymphoid tissue 6.3 Colon Colon - Transverse 0001157 1001 918 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988678 193401 0.971081 0.990759 0.802276 23249 1 76 0.00231275 138 0 6.65733e+07 0.027946 747654 6.71943e+07 6.20032e+06 23271 3.30941e+07 0 0.168805 0.990759 0.794862 6.65733e+07 0.00345529 1.44624e+07 6.97044e+06 1.46018e+07 162 1.45645e+07 1.03293e+07 0.00288282 1.46371e+07 50.1244 0.0111268 0.99284 0 50.2398 GTEX-11O72-2326-SM-5BC7H 2 C1 2 pieces 7.1 Thyroid Thyroid 0002046 1004 915 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988823 340714 0.974645 0.992085 0.817953 23932 1 76 0.00262627 196 0 8.85876e+07 0.0249763 221640 8.92943e+07 2.12969e+07 23951 4.4012e+07 0 0.156692 0.992085 0.811479 8.85876e+07 0.00486481 1.94526e+07 1.0707e+07 1.96482e+07 206 1.96928e+07 1.6604e+07 0.00374186 1.9689e+07 49.9951 0.00248213 0.995348 0 50.2501 GTEX-11O72-2726-SM-5HL6K 3 C1 2 pieces; glands autolyzed, stroma preserved 6.1 Prostate Prostate 0002367 1012 909 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988822 259435 0.969196 0.991697 0.744924 24576 1 76 0.00231107 151 0 7.21463e+07 0.0305014 1.11149e+06 7.27503e+07 7.69638e+06 24606 3.58489e+07 0 0.224272 0.991697 0.73874 7.21463e+07 0.00366043 1.58582e+07 8.5805e+06 1.59997e+07 168 1.59989e+07 1.00888e+07 0.00298379 1.60663e+07 50.1052 0.0152781 0.994573 0 50.2221 GTEX-11O72-2826-SM-5HL6W 1 C1 4 pieces 7.5 Brain Brain - Cerebellum 0002037 1037 885 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988535 474769 0.937372 0.991125 0.683466 23971 1 76 0.0025419 155 0 7.97497e+07 0.0622385 960104 8.04638e+07 9.7683e+06 24007 3.96495e+07 0 0.253906 0.991125 0.6774 7.97497e+07 0.00349108 1.69821e+07 2.11457e+07 1.71823e+07 176 1.72422e+07 9.46796e+06 0.00301525 1.71148e+07 49.8146 0.0119321 0.993715 0 50.2929 GTEX-11O72-2926-SM-5BC4V 2 C1 4 pieces; congested meninges on 2 pieces 6.3 Brain Brain - Cortex 0001870 1039 883 BP-44264 RNA Extraction from Paxgene-derived Lysate Plate Based 10/03/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984495 303586 0.967854 0.990035 0.827634 23139 1 76 0.00309063 197 0 7.16667e+07 0.0319614 4.88881e+06 7.23881e+07 2.06864e+07 23153 3.55452e+07 0 0.14022 0.990035 0.819387 7.16667e+07 0.00577283 1.57438e+07 1.36421e+07 1.57195e+07 220 1.56764e+07 5.52224e+06 0.00442423 1.61342e+07 50.7196 0.0675361 0.995574 0 49.9612 GTEX-11O72-3026-SM-5986R 2 C1 1 piece, anterior 7.2 Pituitary Pituitary 0000007 1039 883 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985863 303870 0.970429 0.990478 0.791138 24204 1 76 0.00264936 135 0 7.28471e+07 0.0292381 220847 7.35474e+07 1.67289e+07 24228 3.61675e+07 0 0.179291 0.990478 0.783605 7.28471e+07 0.00630537 1.5765e+07 1.53042e+07 1.577e+07 146 1.58914e+07 1.29519e+07 0.00446885 1.59625e+07 50.1115 0.00300278 0.995092 0 50.008 GTEX-11OC5-0004-SM-5S2O6 B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1171 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99368 698335 0.962269 0.995092 0.839578 19062 1 76 0.0016659 144 0 6.03365e+07 0.0371808 557255 6.06342e+07 4.11355e+06 19075 3.0047e+07 0 0.12269 0.995092 0.835457 6.03365e+07 0.00237279 1.32199e+07 1.32366e+07 1.34062e+07 144 1.33418e+07 1.31212e+07 0.00201884 1.338e+07 50.0715 0.00919045 0.996503 0 50.3498 GTEX-11OC5-0006-SM-5N9FA B1 8.8 Blood Whole Blood 0013756 1171 BP-39787 RNA isolation_PAXgene Blood RNA (Manual) 06/11/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986464 939841 0.958442 0.988185 0.738016 20823 1 76 0.00415082 150 0 9.36644e+07 0.0412146 138707 9.47843e+07 4.48036e+06 20854 4.65472e+07 0 0.220427 0.988185 0.729296 9.36644e+07 0.00430178 2.05965e+07 4.92197e+07 2.07595e+07 167 2.07859e+07 1.7062e+07 0.00422617 2.07444e+07 49.9501 0.0014634 0.989905 0 50.1971 GTEX-11OC5-0008-SM-5S2OH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1272 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992988 547966 0.970165 0.99497 0.84262 19731 1 76 0.00147401 148 0 6.81245e+07 0.0294988 252617 6.84689e+07 4.88675e+06 19744 3.39165e+07 0 0.127546 0.99497 0.838381 6.81245e+07 0.00221662 1.50482e+07 1.34255e+07 1.51628e+07 148 1.51486e+07 1.64026e+07 0.00184458 1.52093e+07 50.1 0.00368951 0.996951 0 50.1897 GTEX-11OC5-0126-SM-5HL6A 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~30 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1272 914 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992082 243409 0.966483 0.993955 0.793353 23111 1 76 0.00208519 149 0 6.28834e+07 0.0333629 621103 6.32659e+07 6.69968e+06 23132 3.13138e+07 0 0.17313 0.993955 0.788557 6.28834e+07 0.00305797 1.37326e+07 1.00043e+07 1.3859e+07 153 1.38069e+07 9.5828e+06 0.00257066 1.38972e+07 50.1629 0.00981734 0.995827 0 50.2291 GTEX-11OC5-0326-SM-5PNW5 0 B1 2 pieces, ~10% interstitial fat, rep. delineated 9 Muscle Muscle - Skeletal 0011907 1278 910 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99232 222027 0.980551 0.994242 0.871475 19513 1 76 0.00180016 208 0 8.23865e+07 0.0192168 676317 8.28636e+07 7.54976e+06 19525 4.104e+07 0 0.109076 0.994242 0.866457 8.23865e+07 0.00276684 1.77525e+07 1.18807e+07 1.78644e+07 234 1.78404e+07 1.73685e+07 0.00228257 1.79079e+07 50.0945 0.00816181 0.996164 0 50.157 GTEX-11OC5-0426-SM-5Q5AR 0 B1 2 pieces, clean specimens, minute adherent ~0.5mm nubbin fascial nubbin on one, delineated 7 Blood Vessel Artery - Tibial 0007610 1283 906 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99163 167400 0.973499 0.993254 0.855078 19953 1 76 0.00170274 156 0 6.85437e+07 0.0261505 318891 6.90092e+07 4.95569e+06 19960 3.41167e+07 0 0.118421 0.993254 0.84931 6.85437e+07 0.00269484 1.46593e+07 6.20169e+06 1.46817e+07 166 1.46083e+07 1.37072e+07 0.00219798 1.48424e+07 50.3975 0.00462099 0.994879 0 50.0383 GTEX-11OC5-0526-SM-5N9EE 0 B1 2 pieces, generally clean specimens; partial ~0.2mm rim of fat on one, delineated 5.7 Nerve Nerve - Tibial 0001323 1285 903 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98729 334591 0.964737 0.988658 0.762998 24801 1 76 0.00398142 222 0 9.56156e+07 0.0350413 626989 9.67125e+07 4.72766e+06 24842 4.74837e+07 0 0.201738 0.988658 0.754345 9.56156e+07 0.00418165 2.09675e+07 9.26843e+06 2.10807e+07 246 2.10014e+07 1.31281e+07 0.00408139 2.1175e+07 50.2057 0.00648302 0.990027 0 50.1347 GTEX-11OC5-0526-SM-EZ6XW 0 B1 2 pieces, generally clean specimens; partial ~0.2mm rim of fat on one, delineated Nerve Nerve - Tibial 0001323 1285 903 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11OC5-0626-SM-5HL6M 1 B1 2 pieces, no abnormalities; Purkinje cells look good 6.8 Brain Brain - Cerebellum 0002037 1426 764 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989607 347236 0.95346 0.991811 0.729379 22703 1 76 0.00225674 129 0 6.45057e+07 0.0461895 884434 6.50382e+07 7.01445e+06 22724 3.20846e+07 0 0.224081 0.991811 0.723406 6.45057e+07 0.00330774 1.40727e+07 1.28932e+07 1.41957e+07 147 1.42139e+07 8.13499e+06 0.00278107 1.41857e+07 49.9504 0.0135987 0.994016 0 50.2177 GTEX-11OC5-0726-SM-5P9JK 1 B1 2 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 1425 765 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990095 1.0199e+06 0.937492 0.990675 0.810032 24004 1 76 0.0032857 274 0 9.86332e+07 0.0621085 6.93634e+06 9.95616e+07 3.30792e+06 24027 4.91261e+07 0 0.12746 0.990675 0.802479 9.86332e+07 0.00370077 2.11479e+07 4.90098e+07 2.16019e+07 312 2.1463e+07 1.3117e+07 0.00349311 2.13539e+07 49.8726 0.0696688 0.991256 0 50.531 GTEX-11OF3-0006-SM-5O9CM B1 7.2 Blood Whole Blood 0013756 665 BP-39923 RNA isolation_PAXgene Blood RNA (Manual) 06/14/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.94944 343403 0.986383 0.95191 0.814672 19095 1 76 0.00383628 187 0 1.31927e+08 0.0125336 506489 1.38591e+08 5.72391e+06 19099 6.55759e+07 0 0.17171 0.95191 0.775495 1.31927e+08 0.00528127 3.11452e+07 2.15791e+08 3.15882e+07 215 3.16173e+07 3.56475e+07 0.0045569 3.14773e+07 49.8891 0.00365455 0.95438 0 50.353 GTEX-11OF3-0008-SM-5S2NH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 887 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.994078 373140 0.974634 0.995582 0.878659 18656 1 76 0.00148705 147 0 6.21257e+07 0.0251783 303712 6.24014e+07 4.28203e+06 18662 3.0939e+07 0 0.0959745 0.995582 0.874777 6.21257e+07 0.00227982 1.3709e+07 1.02602e+07 1.38728e+07 157 1.37969e+07 1.35809e+07 0.00188283 1.38875e+07 50.1637 0.00486707 0.997086 0 50.297 GTEX-11OF3-0011-R11a-SM-57WCR B1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 739 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.98763 611096 0.945205 0.990939 0.736915 23436 1 76 0.00227529 201 0 8.34004e+07 0.054235 895176 8.41629e+07 1.12202e+07 23460 4.14294e+07 0 0.208289 0.990939 0.730238 8.34004e+07 0.00404169 1.79153e+07 1.44313e+07 1.80154e+07 211 1.8121e+07 1.15237e+07 0.00315554 1.80616e+07 49.9179 0.0106362 0.994249 0 50.1393 GTEX-11OF3-0011-R5a-SM-57WB4 B1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.99159 504131 0.961057 0.993973 0.835098 23460 1 76 0.00212333 197 0 7.09786e+07 0.0385759 3.89854e+06 7.1409e+07 8.18636e+06 23477 3.53244e+07 0 0.125959 0.993973 0.830064 7.09786e+07 0.00374055 1.55902e+07 1.92866e+07 1.54732e+07 230 1.54786e+07 8.04463e+06 0.00293 1.57293e+07 50.4017 0.0545945 0.996355 0 49.8115 GTEX-11OF3-0011-R6b-SM-57WBG B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989724 703014 0.959657 0.992463 0.837302 23956 1 76 0.00214549 270 0 8.60156e+07 0.039942 5.21215e+06 8.66688e+07 9.91663e+06 23970 4.27843e+07 0 0.122356 0.992463 0.830991 8.60156e+07 0.00370958 1.88523e+07 2.22715e+07 1.87498e+07 299 1.87313e+07 1.0524e+07 0.00292537 1.90834e+07 50.4655 0.0601387 0.995203 0 49.8637 GTEX-11OF3-0011-R7a-SM-57WCG B1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.9911 582885 0.96048 0.993376 0.837077 23151 1 76 0.00220312 268 0 7.87878e+07 0.0392546 5.29986e+06 7.93131e+07 9.03883e+06 23162 3.92095e+07 0 0.123403 0.993376 0.831532 7.87878e+07 0.00382757 1.7242e+07 2.16268e+07 1.7271e+07 288 1.71631e+07 7.90931e+06 0.00301348 1.75146e+07 50.5069 0.066822 0.995652 0 50.042 GTEX-11OF3-0011-R8b-SM-57WCS B1, A1 7.6 Brain Brain - Hypothalamus 0001898 739 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989918 612077 0.959887 0.992801 0.837863 24434 1 76 0.00215146 270 0 8.35257e+07 0.0397497 3.76548e+06 8.41314e+07 1.04032e+07 24454 4.15441e+07 0 0.122024 0.992801 0.831831 8.35257e+07 0.00368854 1.83789e+07 1.71483e+07 1.83575e+07 282 1.83564e+07 1.02278e+07 0.00291777 1.85986e+07 50.3277 0.0447571 0.995684 0 49.9709 GTEX-11OF3-0126-SM-5PNYF 1 B1 6 pieces; well trimmed 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 769 1035 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.987835 320381 0.975741 0.988117 0.80734 24236 1 76 0.00334289 227 0 1.02216e+08 0.0240192 403689 1.03445e+08 3.86061e+06 24263 5.0816e+07 0 0.1684 0.988117 0.797747 1.02216e+08 0.00396843 2.24594e+07 1.27019e+07 2.25885e+07 245 2.2552e+07 1.89999e+07 0.00365557 2.2532e+07 49.9778 0.00390245 0.988399 0 50.1432 GTEX-11OF3-0626-SM-5BC4Y 2 B1 2 pieces 6.5 Thyroid Thyroid 0002046 788 1016 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986819 280421 0.968461 0.99071 0.756886 24561 1 76 0.00279495 142 0 7.10659e+07 0.0311937 328699 7.17323e+07 1.71323e+07 24597 3.52795e+07 0 0.211575 0.99071 0.749854 7.10659e+07 0.00492491 1.55171e+07 8.15127e+06 1.57053e+07 157 1.57696e+07 1.08015e+07 0.00385575 1.57154e+07 49.914 0.0045823 0.994601 0 50.3014 GTEX-11OF3-0726-SM-5BC4Z 2 B1 2 pieces; moderate central vascular congestion; mild macrovesicular steatosis; thin capsule present 6 Liver Liver 0001114 790 1014 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984743 295130 0.967942 0.989875 0.793145 21133 1 76 0.00284267 131 0 6.12333e+07 0.0319205 2.05868e+06 6.18597e+07 1.36821e+07 21156 3.03625e+07 0 0.174797 0.989875 0.785115 6.12333e+07 0.00551899 1.33943e+07 8.64773e+06 1.32334e+07 153 1.32644e+07 7.59146e+06 0.0041739 1.36428e+07 50.7031 0.0332799 0.995007 0 49.6979 GTEX-11OF3-0826-SM-5BC51 0 B1 Multiple fragments. 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 791 1013 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98432 251162 0.969876 0.989005 0.782476 23528 1 76 0.00285591 140 0 6.41217e+07 0.0298662 535467 6.48345e+07 1.6696e+07 23553 3.17986e+07 0 0.1874 0.989005 0.773873 6.41217e+07 0.0053337 1.40229e+07 8.92869e+06 1.41097e+07 156 1.41467e+07 8.67143e+06 0.00408894 1.42717e+07 50.2198 0.00825898 0.99369 0 50.1543 GTEX-11OF3-1126-SM-5986C 2 B1 2 pieces; patchy alveolar hemorrhage; pleura present 6.9 Lung Lung 0008952 796 1008 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985349 213688 0.975094 0.990052 0.772441 22284 1 76 0.00288112 121 0 6.11541e+07 0.0245858 326819 6.17685e+07 1.39606e+07 22305 3.03468e+07 0 0.202654 0.990052 0.764757 6.11541e+07 0.00643468 1.35071e+07 6.84691e+06 1.35956e+07 131 1.36837e+07 9.70242e+06 0.00464946 1.36912e+07 50.0136 0.00529103 0.994755 0 50.1633 GTEX-11OF3-1326-SM-5N9FJ 2 B1 6 pieces 5.7 Kidney Kidney - Cortex 0001225 800 1004 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988601 350911 0.975626 0.990358 0.85003 22815 1 76 0.00428539 268 0 9.6745e+07 0.0242219 4.41839e+06 9.76869e+07 5.02713e+06 22830 4.81033e+07 0 0.125596 0.990358 0.841834 9.6745e+07 0.00433752 2.12747e+07 3.06562e+07 2.15202e+07 319 2.15176e+07 8.73873e+06 0.00431141 2.14328e+07 49.9013 0.0452301 0.992114 0 50.2869 GTEX-11OF3-1326-SM-DLIPK 2 B1 6 pieces Kidney Kidney - Cortex 0001225 800 1004 BP-53580 DNA Extraction from Paxgene-derived Lysate Plate Based 06/05/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11OF3-1326-SM-DMZ32 2 B1 6 pieces Kidney Kidney - Cortex 0001225 800 1004 BP-53580 DNA Extraction from Paxgene-derived Lysate Plate Based 06/05/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11OF3-1726-SM-5GU5Q 3 B1 2 pieces: glands autolyzed = 3; stroma -1; 1 piece is 40% fat 5.9 Prostate Prostate 0002367 817 987 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989111 256917 0.964874 0.991667 0.79019 24420 1 76 0.00217716 153 0 6.67982e+07 0.0349091 1.3719e+06 6.73595e+07 4.2677e+06 24446 3.31959e+07 0 0.174684 0.991667 0.783605 6.67982e+07 0.00317079 1.47185e+07 7.19384e+06 1.47844e+07 179 1.4691e+07 7.75885e+06 0.00267269 1.49739e+07 50.4768 0.0203668 0.994222 0 50.1118 GTEX-11OF3-1826-SM-5987N 2 B1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 820 984 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982026 483355 0.927083 0.987427 0.73066 33590 1 76 0.00282895 219 0 9.70145e+07 0.0725826 986659 9.82497e+07 2.48364e+07 33657 4.81257e+07 0 0.196424 0.987427 0.721473 9.70145e+07 0.00631313 1.98975e+07 1.60334e+07 1.9864e+07 215 2.00782e+07 1.56311e+07 0.00456151 2.01425e+07 50.0799 0.0100424 0.992828 0 49.9578 GTEX-11OF3-1926-SM-59889 1 B1 2 pieces; fibroadipose tissue without mammary ducts 6.4 Breast Breast - Mammary Tissue 0008367 827 977 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986393 254663 0.977671 0.990212 0.806445 23623 1 76 0.00268941 170 0 8.03694e+07 0.0219651 344195 8.11638e+07 1.54723e+07 23648 3.99163e+07 0 0.171227 0.990212 0.798551 8.03694e+07 0.0060682 1.77105e+07 9.17631e+06 1.78195e+07 182 1.78734e+07 1.39632e+07 0.00437229 1.79471e+07 50.1029 0.00424074 0.994032 0 50.1533 GTEX-11OF3-2226-SM-5986F 1 B1 6 pieces; well dissected muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 834 970 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.978836 220911 0.973115 0.98672 0.828391 22154 1 76 0.00292586 129 0 5.90641e+07 0.0267371 2.10928e+06 5.9859e+07 1.24645e+07 22170 2.92121e+07 0 0.144725 0.98672 0.81739 5.90641e+07 0.0083186 1.32243e+07 7.21157e+06 1.28869e+07 159 1.29664e+07 5.86968e+06 0.00560068 1.35695e+07 51.1365 0.0352374 0.994605 0 49.3541 GTEX-11OF3-2326-SM-5GU73 1 B1 6 pieces; well dissected muscularis except for 10% external fat on 2 pieces 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 837 967 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986477 243780 0.967848 0.989542 0.81131 22384 1 76 0.00221311 152 0 6.54139e+07 0.0319667 2.08976e+06 6.61053e+07 4.4429e+06 22402 3.24926e+07 0 0.156538 0.989542 0.802825 6.54139e+07 0.00319492 1.42116e+07 6.73469e+06 1.43674e+07 182 1.43443e+07 7.35008e+06 0.00270249 1.44199e+07 50.1314 0.0316126 0.992606 0 50.2726 GTEX-11OF3-2426-SM-5Q5AS 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 885 919 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.983763 168054 0.974518 0.985831 0.802106 22971 1 76 0.0019636 164 0 7.08155e+07 0.0252055 488572 7.18334e+07 4.95051e+06 22991 3.52204e+07 0 0.172411 0.985831 0.790741 7.08155e+07 0.00308406 1.56266e+07 7.0647e+06 1.56393e+07 177 1.5591e+07 1.1342e+07 0.00252265 1.58196e+07 50.3639 0.00680146 0.987899 0 50.0204 GTEX-11OF3-2526-SM-5P9JL 0 B1 2 pieces; 1 with 20% internal fat 7.7 Muscle Muscle - Skeletal 0011907 887 917 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992957 201339 0.984231 0.993511 0.88285 20387 1 76 0.00294785 270 0 9.98084e+07 0.0155235 1.24743e+06 1.0046e+08 3.29846e+06 20401 4.97602e+07 0 0.101381 0.993511 0.877121 9.98084e+07 0.00319303 2.18788e+07 1.01254e+07 2.20259e+07 264 2.19822e+07 2.22289e+07 0.00307037 2.19767e+07 49.9937 0.0124172 0.994065 0 50.1675 GTEX-11OF3-2626-SM-5GU7F 0 B1 6 pieces; well trimmed except for 1 with 1 mm subcutaneous fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 887 917 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990918 417365 0.97615 0.99328 0.810331 23673 1 76 0.00223034 201 0 8.30553e+07 0.0235515 408986 8.36172e+07 5.50074e+06 23703 4.13013e+07 0 0.165818 0.99328 0.804886 8.30553e+07 0.00332998 1.80843e+07 8.82137e+06 1.81768e+07 191 1.81685e+07 1.57017e+07 0.00277885 1.82802e+07 50.1532 0.00489117 0.995642 0 50.1276 GTEX-11OF3-2926-SM-5HL78 1 B1 2 pieces; cortex 6.3 Brain Brain - Cortex 0001870 958 846 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.985609 1.18438e+06 0.885494 0.987668 0.627726 24293 1 76 0.0024448 157 0 8.35921e+07 0.114057 1.52718e+06 8.46358e+07 9.34124e+06 24321 4.1586e+07 0 0.257768 0.987668 0.619984 8.35921e+07 0.00346396 1.6663e+07 7.76306e+07 1.73464e+07 174 1.73532e+07 8.09425e+06 0.00295331 1.68274e+07 49.2309 0.0180441 0.989727 0 51.0047 GTEX-11OF3-3026-SM-5GU52 2 B1 2 pieces; larger is anterior, smaller is posterior 7.1 Pituitary Pituitary 0000007 959 845 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990224 399952 0.961913 0.992693 0.758313 25338 1 76 0.00210214 131 0 6.4677e+07 0.0378099 542123 6.51531e+07 3.90841e+06 25377 3.21445e+07 0 0.2036 0.992693 0.752772 6.4677e+07 0.00299002 1.37543e+07 6.58356e+06 1.38586e+07 151 1.38542e+07 9.46936e+06 0.00254498 1.39114e+07 50.1031 0.00832075 0.995162 0 50.1889 GTEX-11OF3-3126-SM-5GU5E 1 B1 2 pieces; quantity insufficient 7.3 Brain Brain - Cerebellum 0002037 960 844 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990981 398002 0.961725 0.993336 0.839362 22566 1 76 0.00207517 145 0 6.04036e+07 0.0379076 1.99801e+06 6.08088e+07 3.4369e+06 22576 3.00458e+07 0 0.122362 0.993336 0.833769 6.04036e+07 0.00305159 1.31993e+07 1.27271e+07 1.33798e+07 173 1.33132e+07 7.22816e+06 0.00256222 1.33995e+07 50.1616 0.0328573 0.995692 0 50.3394 GTEX-11ONC-0003-SM-5DWT5 B1 Blood Whole Blood 0013756 593 BP-39922 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/14/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ONC-0005-SM-5O9CY B1 7.2 Blood Whole Blood 0013756 593 BP-39923 RNA isolation_PAXgene Blood RNA (Manual) 06/14/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.950998 372603 0.986665 0.953421 0.81538 17596 1 76 0.00354178 137 0 1.22893e+08 0.0120629 260035 1.28897e+08 5.15759e+06 17599 6.1094e+07 0 0.171285 0.953421 0.777401 1.22893e+08 0.00491664 2.94552e+07 2.19544e+08 2.96283e+07 174 2.96804e+07 3.63854e+07 0.00422746 2.9736e+07 50.0468 0.00201738 0.955843 0 50.1465 GTEX-11ONC-0008-SM-5S2MG B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 736 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993417 526206 0.970654 0.994998 0.857487 19828 1 76 0.00144376 152 0 6.92866e+07 0.0290525 338328 6.96349e+07 5.07134e+06 19839 3.45053e+07 0 0.113167 0.994998 0.853198 6.92866e+07 0.00225347 1.52645e+07 1.36023e+07 1.53474e+07 160 1.53041e+07 1.61822e+07 0.00184797 1.54349e+07 50.2129 0.0048586 0.99658 0 50.1355 GTEX-11ONC-0011-R1a-SM-57WD4 B1, A1 5.9 Brain Brain - Hippocampus 0001954 587 BP-42768 RNA isolation_PAXgene Tissue miRNA 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990025 316112 0.967023 0.992761 0.827633 21936 1 76 0.00181597 195 0 6.19234e+07 0.0327934 6.1242e+06 6.23749e+07 7.59941e+06 21947 3.08137e+07 0 0.13939 0.992761 0.821642 6.19234e+07 0.00349746 1.36054e+07 1.99959e+07 1.3509e+07 220 1.33389e+07 4.57026e+06 0.0026544 1.39232e+07 51.0716 0.0981837 0.995497 0 49.8223 GTEX-11ONC-0011-R4b-SM-DO93H B1, A1 7.1 Brain Brain - Amygdala 0001876 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994332 349019 0.970806 0.995417 0.851563 22636 1 76 0.00170553 370 0 7.6691e+07 0.0289794 8.36505e+06 7.7044e+07 4.43589e+06 22651 3.82153e+07 0 0.119243 0.995417 0.847661 7.6691e+07 0.00248467 1.68958e+07 1.52787e+07 1.71865e+07 331 1.6988e+07 6.97059e+06 0.00209467 1.71614e+07 50.254 0.108575 0.996503 0 50.4264 GTEX-11ONC-0011-R5b-SM-DO93I B1, A1 8.9 Brain Brain - Caudate (basal ganglia) 0001873 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994309 627988 0.966308 0.995203 0.829943 24391 1 76 0.00174757 373 0 9.85372e+07 0.0333757 5.8183e+06 9.90122e+07 5.35142e+06 24415 4.9105e+07 0 0.136366 0.995203 0.825961 9.85372e+07 0.00233025 2.15269e+07 1.86093e+07 2.19208e+07 346 2.17583e+07 1.17331e+07 0.00203865 2.17609e+07 50.003 0.0587635 0.996096 0 50.4532 GTEX-11ONC-0011-R6a-SM-DO12A B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987671 361876 0.967511 0.99189 0.838419 24039 1 76 0.00217779 268 0 9.19009e+07 0.0322251 8.0558e+06 9.26523e+07 9.75606e+06 24061 4.56566e+07 0 0.129092 0.99189 0.831619 9.19009e+07 0.00430738 2.00045e+07 1.99672e+07 2.04662e+07 314 2.04784e+07 9.14681e+06 0.00323806 2.03121e+07 49.7961 0.0869465 0.996109 0 50.5704 GTEX-11ONC-0011-R7b-SM-DO93J B1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 587 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993998 658651 0.967831 0.994962 0.84096 24031 1 76 0.00175418 374 0 1.09996e+08 0.0318951 8.63167e+06 1.10553e+08 6.51257e+06 24053 5.482e+07 0 0.126871 0.994962 0.836723 1.09996e+08 0.0020529 2.38551e+07 2.73033e+07 2.44386e+07 348 2.42514e+07 1.16885e+07 0.00190339 2.41337e+07 49.8783 0.0780769 0.995926 0 50.6041 GTEX-11ONC-0011-R8b-SM-5NQ87 B1, A1 7.6 Brain Brain - Hypothalamus 0001898 587 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991862 298491 0.960941 0.99381 0.815598 23864 1 76 0.0019405 200 0 7.0563e+07 0.0388293 4.38178e+06 7.10025e+07 5.69586e+06 23882 3.51356e+07 0 0.145343 0.99381 0.810549 7.0563e+07 0.00276653 1.52659e+07 1.6909e+07 1.56725e+07 252 1.55146e+07 6.7528e+06 0.00235271 1.55488e+07 50.055 0.061713 0.995758 0 50.6571 GTEX-11ONC-0011-R9b-SM-5NQ8J B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 587 BP-42719 RNA isolation_PAXgene Tissue miRNA 08/26/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.992386 310935 0.96181 0.994535 0.813037 22391 1 76 0.00184327 215 0 6.74718e+07 0.0379673 4.54161e+06 6.78426e+07 5.10886e+06 22408 3.35991e+07 0 0.148773 0.994535 0.808594 6.74718e+07 0.00273916 1.47112e+07 1.84593e+07 1.50399e+07 235 1.48272e+07 6.34435e+06 0.00229025 1.50509e+07 50.3744 0.0669434 0.996684 0 50.5525 GTEX-11ONC-0126-SM-5PNW6 0 B1 2 pieces; hypertrophied myofibers 5.7 Heart Heart - Left Ventricle 0006566 656 671 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991275 171725 0.98019 0.993417 0.872452 19439 1 76 0.00166389 366 0 7.61716e+07 0.0197215 4.81366e+06 7.66763e+07 6.94124e+06 19447 3.79137e+07 0 0.107738 0.993417 0.866709 7.61716e+07 0.00267023 1.69047e+07 1.72178e+07 1.69578e+07 335 1.65628e+07 6.13824e+06 0.00216597 1.74198e+07 51.2609 0.0627789 0.995561 0 50.0784 GTEX-11ONC-0526-SM-5BC57 1 B1 2 pieces; 20% internal fat 6.8 Pancreas Pancreas 0001150 660 667 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.973216 281752 0.982924 0.97865 0.842187 20383 1 76 0.00306111 101 0 6.8644e+07 0.0165136 179204 7.01416e+07 1.85357e+07 20394 3.40288e+07 0 0.140737 0.97865 0.824206 6.8644e+07 0.00629329 1.57717e+07 2.81028e+07 1.59351e+07 111 1.59495e+07 2.22627e+07 0.00466823 1.61324e+07 50.2851 0.00255489 0.984083 0 50.2577 GTEX-11ONC-0926-SM-5BC5E 1 B1 6 pieces; no plaques; well trimmed 6.3 Blood Vessel Artery - Aorta 0001496 667 660 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983711 333449 0.970297 0.988688 0.713519 23882 1 76 0.00289708 153 0 8.23952e+07 0.0292765 235966 8.33379e+07 2.11094e+07 23919 4.0816e+07 0 0.256778 0.988688 0.705448 8.23952e+07 0.00534018 1.77429e+07 8.46942e+06 1.79828e+07 167 1.80744e+07 1.21695e+07 0.00411248 1.80444e+07 49.9584 0.00283144 0.993665 0 50.3358 GTEX-11ONC-1026-SM-5GU64 0 B1 2 pieces; 1 piece has 30% fibrous component 6.9 Heart Heart - Atrial Appendage 0006631 668 659 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989962 220396 0.97894 0.992787 0.83037 20423 1 76 0.0017745 128 0 5.29358e+07 0.020883 1.97387e+06 5.33204e+07 3.41884e+06 20437 2.63077e+07 0 0.14857 0.992787 0.824381 5.29358e+07 0.00281759 1.15753e+07 7.87137e+06 1.15792e+07 155 1.14617e+07 6.37578e+06 0.00229456 1.18254e+07 50.781 0.0370191 0.995613 0 50.0085 GTEX-11ONC-1126-SM-5GU6G 1 B1 2 pieces; moderate sclerosis; 25% fat around 1 piece 6.1 Blood Vessel Artery - Coronary 0001621 681 646 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986619 192882 0.971327 0.989163 0.779646 22344 1 76 0.00207899 126 0 5.69174e+07 0.0283383 320433 5.7541e+07 3.63409e+06 22365 2.82735e+07 0 0.191681 0.989163 0.771197 5.69174e+07 0.00307363 1.22544e+07 5.5887e+06 1.24245e+07 136 1.23754e+07 9.36499e+06 0.00257503 1.24462e+07 50.1426 0.00556878 0.991707 0 50.3445 GTEX-11ONC-1326-SM-DLIPJ 2 B1 6 pieces; vascular congestion; no glomerular lesions Kidney Kidney - Cortex 0001225 678 649 BP-53779 DNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11ONC-1426-SM-5N9F4 1 B1 6 pieces; well dissected muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 686 641 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986467 320924 0.972407 0.987944 0.792791 23276 1 76 0.00402032 199 0 8.52734e+07 0.0274204 2.1052e+06 8.63141e+07 4.23119e+06 23300 4.23401e+07 0 0.179617 0.987944 0.783233 8.52734e+07 0.00411212 1.87442e+07 9.07151e+06 1.88048e+07 252 1.87513e+07 9.62916e+06 0.00406615 1.89227e+07 50.2274 0.0243899 0.98942 0 50.0806 GTEX-11ONC-1526-SM-5GU6S 1 B1 6 pieces; well dissected mucosa 6.5 Esophagus Esophagus - Mucosa 0006920 686 641 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989106 240466 0.974487 0.991916 0.798993 21757 1 76 0.00201276 134 0 6.49575e+07 0.0251957 775741 6.54869e+07 4.2449e+06 21773 3.22823e+07 0 0.175494 0.991916 0.792534 6.49575e+07 0.00303703 1.45346e+07 7.78114e+06 1.46544e+07 165 1.46278e+07 9.53112e+06 0.00252344 1.47414e+07 50.1934 0.0118457 0.994726 0 50.2052 GTEX-11ONC-1926-SM-5GU75 0 B1 6 pieces; well dissected muscularis 5.8 Colon Colon - Sigmoid 0001159 703 624 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989966 262132 0.967836 0.992453 0.767714 22741 1 76 0.00200613 121 0 5.84442e+07 0.0319655 518427 5.88886e+07 3.77619e+06 22765 2.90458e+07 0 0.200121 0.992453 0.76192 5.84442e+07 0.00289586 1.26496e+07 5.64384e+06 1.27038e+07 142 1.26568e+07 8.10399e+06 0.00244988 1.28359e+07 50.3513 0.00880351 0.994941 0 50.107 GTEX-11ONC-2026-SM-5HL61 2 B1 6 pieces; 3 with minimal mucosa 6.3 Colon Colon - Transverse 0001157 708 619 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991276 203652 0.97298 0.993194 0.773141 22878 1 76 0.00204426 131 0 6.34722e+07 0.0267687 544184 6.39071e+07 6.93344e+06 22898 3.15956e+07 0 0.199839 0.993194 0.767879 6.34722e+07 0.00283933 1.38609e+07 6.06729e+06 1.39621e+07 149 1.39438e+07 9.53893e+06 0.00244102 1.39949e+07 50.0916 0.00851523 0.995113 0 50.1818 GTEX-11ONC-2126-SM-5HL6E 1 B1 2 pieces; ducts present, especially in 1 piece [annotated] 7.2 Breast Breast - Mammary Tissue 0008367 714 613 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989992 215254 0.972787 0.992693 0.783401 23054 1 76 0.00208492 137 0 6.40247e+07 0.0269321 275885 6.4496e+07 7.38091e+06 23082 3.18323e+07 0 0.189385 0.992693 0.777677 6.40247e+07 0.0032079 1.40299e+07 7.1278e+06 1.40682e+07 150 1.40602e+07 1.06488e+07 0.00264488 1.42049e+07 50.2561 0.00427755 0.995394 0 50.0681 GTEX-11ONC-2226-SM-5HL6D 1 B1 2 pieces; reduced spermatogenesis 5.8 Testis Testis 0000473 718 609 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990891 370301 0.93649 0.992748 0.726911 31236 1 76 0.00215966 139 0 6.78121e+07 0.0632839 809465 6.83075e+07 7.24302e+06 31292 3.37615e+07 0 0.209578 0.992748 0.72164 6.78121e+07 0.00303494 1.44061e+07 1.30502e+07 1.44134e+07 152 1.44094e+07 9.20418e+06 0.00259648 1.45267e+07 50.2026 0.0118503 0.994606 0 50.0126 GTEX-11ONC-2326-SM-5HL6P 0 B1 4 pieces; up to 50% fatty envelope 6.7 Nerve Nerve - Tibial 0001323 734 593 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989086 196746 0.97035 0.991648 0.77585 23040 1 76 0.00213783 136 0 5.76991e+07 0.0293372 266270 5.8185e+07 6.7815e+06 23060 2.8696e+07 0 0.1945 0.991648 0.76937 5.76991e+07 0.00330979 1.26865e+07 6.05182e+06 1.2812e+07 135 1.28138e+07 9.58106e+06 0.0027223 1.28287e+07 50.0292 0.00457626 0.99421 0 50.2462 GTEX-11ONC-2326-SM-DOKK8 0 B1 4 pieces; up to 50% fatty envelope Nerve Nerve - Tibial 0001323 734 593 BP-53786 DNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-10574 02/14/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-11ONC-2426-SM-5GU7H 0 B1 2 pieces; 10 & 20% internal fat 8.6 Muscle Muscle - Skeletal 0011907 734 593 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992779 273039 0.982724 0.994802 0.860979 19703 1 76 0.00160611 129 0 6.25726e+07 0.0169897 469794 6.28996e+07 3.80505e+06 19714 3.11557e+07 0 0.121745 0.994802 0.856503 6.25726e+07 0.00244739 1.33103e+07 5.88451e+06 1.34266e+07 147 1.3394e+07 1.31777e+07 0.00202589 1.34588e+07 50.1208 0.00746895 0.996825 0 50.2174 GTEX-11ONC-2526-SM-5986W 0 B1 2 pieces; 20% fibrous tissue in 1 piece 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 735 592 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985309 346631 0.97461 0.989515 0.786205 24795 1 76 0.00267754 221 0 9.11943e+07 0.0250376 284025 9.21606e+07 1.91409e+07 24833 4.52945e+07 0 0.188404 0.989515 0.777962 9.11943e+07 0.00603196 2.00569e+07 9.81278e+06 2.01461e+07 226 2.02635e+07 1.59046e+07 0.00434762 2.03004e+07 50.0455 0.00308185 0.993721 0 50.1109 GTEX-11ONC-2726-SM-5N9DZ 1 B1 3 pieces; prominent calcified plaques 5.7 Blood Vessel Artery - Tibial 0007610 740 587 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984286 327909 0.97243 0.985183 0.779038 23901 1 76 0.00411551 215 0 1.01568e+08 0.027235 502799 1.03095e+08 5.56583e+06 23941 5.03547e+07 0 0.193392 0.985183 0.767495 1.01568e+08 0.00439489 2.20783e+07 1.09042e+07 2.21899e+07 243 2.20919e+07 1.70069e+07 0.00425507 2.22721e+07 50.2031 0.00487703 0.98608 0 50.126 GTEX-11ONC-2826-SM-5P9GQ 2 B1 1 piece; mostly anterior; posterior annotated 6.5 Pituitary Pituitary 0000007 920 407 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991972 428847 0.963492 0.992301 0.739282 27114 1 76 0.00302589 273 0 1.19246e+08 0.036263 1.0983e+06 1.20172e+08 3.93966e+06 27172 5.93654e+07 0 0.22421 0.992301 0.733591 1.19246e+08 0.00366388 2.62597e+07 1.77211e+07 2.65014e+07 329 2.64371e+07 1.69979e+07 0.00334478 2.63683e+07 49.9349 0.00913944 0.992631 0 50.2291 GTEX-11ONC-2926-SM-5P9JM 1 B1 2 pieces, 1 with meninges (up to 0.77mm thick) 6.7 Brain Brain - Cortex 0001870 921 406 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99312 527316 0.954248 0.993498 0.801466 24823 1 76 0.00301278 271 0 9.79128e+07 0.0454241 4.0666e+06 9.85536e+07 2.91602e+06 24847 4.8804e+07 0 0.152782 0.993498 0.796255 9.79128e+07 0.00316005 2.11983e+07 3.08704e+07 2.14026e+07 287 2.12627e+07 1.15573e+07 0.00308639 2.13803e+07 50.1379 0.0412628 0.993877 0 50.2398 GTEX-11ONC-3026-SM-5985W 1 B1 2 pieces; well preserved Purkinje cells 6.1 Brain Brain - Cerebellum 0002037 922 405 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.982849 494131 0.939595 0.988058 0.721466 24121 1 76 0.00283634 151 0 7.54851e+07 0.0601016 1.54468e+06 7.63974e+07 1.75957e+07 24147 3.7447e+07 0 0.218129 0.988058 0.712851 7.54851e+07 0.00674076 1.61764e+07 2.47895e+07 1.61923e+07 165 1.62808e+07 8.46550e+06 0.00477826 1.64483e+07 50.2559 0.020219 0.993268 0 50.0245 GTEX-11P7K-0002-SM-58Q9D B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P7K-0002-SM-5DWTW B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P7K-0002-SM-6WBUI B1 Blood Whole Blood 0013756 -101 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P7K-0003-SM-5S2OU B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -101 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.9919 553405 0.962749 0.993397 0.823771 19726 1 76 0.00222741 140 0 6.38517e+07 0.0366143 447965 6.42761e+07 4.25375e+06 19738 3.17761e+07 0 0.138978 0.993397 0.818332 6.38517e+07 0.00300738 1.4065e+07 1.27329e+07 1.4128e+07 142 1.4088e+07 1.39533e+07 0.00261681 1.42135e+07 50.2218 0.00696939 0.994895 0 50.1118 GTEX-11P7K-0006-SM-5N9FM B1 8.8 Blood Whole Blood 0013756 -101 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.985927 902471 0.96351 0.987542 0.822894 19504 1 76 0.00480826 160 0 9.67063e+07 0.035562 382970 9.79263e+07 4.40997e+06 19516 4.80653e+07 0 0.140616 0.987542 0.812642 9.67063e+07 0.0048466 2.16585e+07 8.38461e+07 2.1771e+07 176 2.17928e+07 2.26602e+07 0.0048274 2.18048e+07 50.0138 0.0039108 0.989156 0 50.1296 GTEX-11P7K-0008-SM-5S2O5 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 351 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992996 494477 0.971855 0.995158 0.873478 19618 1 76 0.00160796 167 0 7.22655e+07 0.0279305 229528 7.26171e+07 5.5891e+06 19625 3.59799e+07 0 0.0983774 0.995158 0.869249 7.22655e+07 0.00226475 1.58783e+07 1.5273e+07 1.60661e+07 172 1.60417e+07 1.70672e+07 0.00193564 1.6067e+07 50.0394 0.0031608 0.99732 0 50.294 GTEX-11P7K-0126-SM-5986E 1 B1 2 pieces; well trimmed except for 10-20% external stroma 8.8 Adrenal Gland Adrenal Gland 0002369 89 1080 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985987 278026 0.978294 0.990708 0.845329 22273 1 76 0.00310571 158 0 7.74908e+07 0.0213678 1.73726e+06 7.82176e+07 1.73199e+07 22294 3.84816e+07 0 0.132965 0.990708 0.837474 7.74908e+07 0.00655561 1.72301e+07 1.1004e+07 1.70422e+07 191 1.71032e+07 1.2613e+07 0.00482244 1.74848e+07 50.5517 0.0222106 0.99543 0 49.7259 GTEX-11P7K-0226-SM-5986Z 1 B1 2 pieces; well dissected 7 Thyroid Thyroid 0002046 96 1073 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984499 266071 0.964777 0.989138 0.746482 23328 1 76 0.00299641 113 0 6.48512e+07 0.0349634 277574 6.55634e+07 1.42763e+07 23362 3.22033e+07 0 0.218295 0.989138 0.738373 6.48512e+07 0.00656549 1.41e+07 8.08383e+06 1.41185e+07 129 1.4214e+07 9.86145e+06 0.00477258 1.42793e+07 50.1146 0.00423368 0.993776 0 50.0327 GTEX-11P7K-0326-SM-59871 1 B1 2 pieces; emphysema & atelectasis 6.9 Lung Lung 0008952 101 1068 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98532 251054 0.97136 0.989354 0.816785 24033 1 76 0.00306708 163 0 7.46815e+07 0.0282711 373957 7.54851e+07 1.66095e+07 24058 3.71036e+07 0 0.154576 0.989354 0.808089 7.46815e+07 0.00610415 1.6462e+07 8.033e+06 1.6574e+07 174 1.66242e+07 1.21427e+07 0.00457942 1.6694e+07 50.1047 0.00495405 0.993388 0 50.1695 GTEX-11P7K-0426-SM-5BC5H 1 B1 2 pieces; slight congestion 5.8 Spleen Spleen 0002106 104 1065 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983739 249991 0.953521 0.988699 0.741953 24495 1 76 0.00339853 127 0 6.77556e+07 0.045481 536551 6.853e+07 1.811e+07 24527 3.35594e+07 0 0.211567 0.988699 0.733569 6.77556e+07 0.0061612 1.46873e+07 1.12303e+07 1.48055e+07 145 1.48638e+07 9.53157e+06 0.00477294 1.49377e+07 50.124 0.00782943 0.993659 0 50.2005 GTEX-11P7K-0526-SM-5BC5I 0 B1 2 pieces; well trimmed 6.9 Pancreas Pancreas 0001150 111 1058 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984412 231217 0.978385 0.989941 0.846274 22126 1 76 0.00301259 110 0 7.51244e+07 0.0211108 259372 7.58878e+07 2.20328e+07 22142 3.72602e+07 0 0.132111 0.989941 0.837761 7.51244e+07 0.00598726 1.71097e+07 2.43727e+07 1.72524e+07 122 1.73176e+07 2.08849e+07 0.00449162 1.74583e+07 50.2023 0.00341783 0.995469 0 50.2076 GTEX-11P7K-0626-SM-5985Z 1 B1 2 pieces; 7.9 Prostate Prostate 0002367 114 1055 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985526 248955 0.96837 0.989398 0.796575 24517 1 76 0.00294399 134 0 7.19049e+07 0.0313024 439882 7.26754e+07 1.45517e+07 24538 3.57335e+07 0 0.171796 0.989398 0.78813 7.19049e+07 0.00622134 1.57497e+07 8.18908e+06 1.56799e+07 156 1.57236e+07 1.11196e+07 0.00457625 1.59589e+07 50.3714 0.00605269 0.993271 0 49.889 GTEX-11P7K-0726-SM-5EGKX 0 B1 2 pieces; stromal fibrosis & ducts: gynecomastoid hyperplasia 8.4 Breast Breast - Mammary Tissue 0008367 123 1046 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986742 264254 0.971088 0.990272 0.8112 24273 1 76 0.0020323 172 0 7.76591e+07 0.0285814 254516 7.8422e+07 6.98747e+06 24304 3.85868e+07 0 0.159889 0.990272 0.803308 7.76591e+07 0.00319376 1.69858e+07 7.403e+06 1.70792e+07 179 1.71124e+07 1.47749e+07 0.00261096 1.72149e+07 50.1494 0.00324547 0.993802 0 50.1371 GTEX-11P7K-0826-SM-5BC5F 0 B1 2 pieces 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 127 1042 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98669 251743 0.97716 0.991511 0.832467 22675 1 76 0.00304384 162 0 7.64409e+07 0.0225745 888394 7.70954e+07 2.22021e+07 22695 3.79572e+07 0 0.144694 0.991511 0.8254 7.64409e+07 0.00518173 1.67758e+07 1.21892e+07 1.68185e+07 195 1.68295e+07 1.16685e+07 0.00410759 1.70899e+07 50.3838 0.0115233 0.996331 0 50.0635 GTEX-11P7K-1026-SM-5HL6Y 0 B1 2 pieces; spermatogenesis 6.9 Testis Testis 0000473 131 1038 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991189 274973 0.940329 0.992999 0.732464 32048 1 76 0.00235582 140 0 7.31799e+07 0.0593694 601504 7.36958e+07 7.66309e+06 32105 3.64409e+07 0 0.207865 0.992999 0.727336 7.31799e+07 0.00318123 1.55172e+07 8.90658e+06 1.55778e+07 148 1.56052e+07 1.188e+07 0.00276777 1.561e+07 50.0077 0.00816198 0.994809 0 50.0975 GTEX-11P7K-1126-SM-5HL4L 0 B1 6 pieces; well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 133 1036 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990521 253046 0.974991 0.993039 0.835393 22049 1 76 0.00247481 157 0 5.83224e+07 0.0247798 587630 5.87313e+07 6.41803e+06 22061 2.89952e+07 0 0.139598 0.993039 0.829577 5.83224e+07 0.00390276 1.28099e+07 7.36094e+06 1.28915e+07 150 1.28351e+07 9.79567e+06 0.00318698 1.30072e+07 50.3329 0.0100054 0.995556 0 50.1589 GTEX-11P7K-1226-SM-5HL4X 0 B1 6 pieces; well dissected 7.4 Esophagus Esophagus - Muscularis 0004648 141 1028 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991294 243333 0.975829 0.99345 0.862193 20939 1 76 0.00217397 152 0 6.56604e+07 0.023865 602769 6.60933e+07 6.92527e+06 20948 3.26824e+07 0 0.113636 0.99345 0.856545 6.56604e+07 0.0032684 1.41164e+07 8.10753e+06 1.42841e+07 161 1.41928e+07 1.23844e+07 0.00272 1.43442e+07 50.2654 0.00911997 0.995605 0 50.2952 GTEX-11P7K-1326-SM-5BC5G 0 B1 6 pieces 9.2 Esophagus Esophagus - Mucosa 0006920 141 1028 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987495 247340 0.976415 0.990824 0.838784 21719 1 76 0.00304695 181 0 7.85212e+07 0.0229154 519103 7.92483e+07 2.1124e+07 21736 3.9032e+07 0 0.137631 0.990824 0.831088 7.85212e+07 0.00500981 1.76106e+07 1.5259e+07 1.76619e+07 173 1.76845e+07 1.62753e+07 0.00402508 1.78413e+07 50.2207 0.00655033 0.994153 0 50.0727 GTEX-11P7K-1426-SM-5EGKY 0 B1 6 pieces; 2 with submucosal glands on edge up to 2 x 0.5mm 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 148 1021 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989872 275171 0.977083 0.992961 0.839471 22373 1 76 0.00201941 279 0 8.51838e+07 0.0225942 652047 8.57876e+07 7.53895e+06 22393 4.23658e+07 0 0.137612 0.992961 0.833562 8.51838e+07 0.0030658 1.8449e+07 8.81148e+06 1.85939e+07 258 1.85832e+07 1.5154e+07 0.00254098 1.8702e+07 50.1592 0.00760071 0.99605 0 50.1956 GTEX-11P7K-1526-SM-5EGI7 1 B1 6 pieces; 2 without muscularis 9 Colon Colon - Transverse 0001157 149 1020 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981999 198629 0.973551 0.987653 0.822009 23384 1 76 0.00314213 160 0 6.99702e+07 0.0253031 985747 7.08448e+07 1.12713e+07 23404 3.46738e+07 0 0.151542 0.987653 0.81186 6.99702e+07 0.00644892 1.5495e+07 1.12626e+07 1.53716e+07 164 1.54662e+07 1.12518e+07 0.00478606 1.57633e+07 50.4758 0.0139142 0.993308 0 49.8002 GTEX-11P7K-1626-SM-5GU63 1 B1 5 pieces; abundant lymphoid tissue [annotated]; well dissected, well preserved 8.5 Small Intestine Small Intestine - Terminal Ileum 0001211 158 1011 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.988701 336411 0.96695 0.991173 0.776594 24698 1 76 0.00286721 170 0 7.91266e+07 0.0321167 445380 7.98313e+07 5.31282e+06 24730 3.93271e+07 0 0.190355 0.991173 0.769739 7.91266e+07 0.00391413 1.74809e+07 9.26966e+06 1.75681e+07 173 1.75662e+07 1.29857e+07 0.00338936 1.76676e+07 50.1438 0.00557902 0.993645 0 50.1245 GTEX-11P7K-1726-SM-5GU6F 1 B1 6 pieces; dilated deep glands (chief cell degeneration) 8.5 Stomach Stomach 0000945 160 1009 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991317 307341 0.977871 0.993855 0.837033 21753 1 76 0.00198556 140 0 6.07089e+07 0.0218021 319435 6.10842e+07 4.23116e+06 21767 3.02032e+07 0 0.140838 0.993855 0.83189 6.07089e+07 0.00285697 1.32483e+07 4.93624e+06 1.33835e+07 147 1.33588e+07 1.10653e+07 0.00242015 1.3418e+07 50.1105 0.00522942 0.996394 0 50.254 GTEX-11P7K-1826-SM-5HL5A 1 B1 5 pieces 7.6 Colon Colon - Sigmoid 0001159 164 1005 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991024 239006 0.978458 0.99352 0.861195 21537 1 76 0.00213202 179 0 7.32847e+07 0.0212103 423050 7.37627e+07 8.64944e+06 21551 3.6468e+07 0 0.117263 0.99352 0.855615 7.32847e+07 0.00328743 1.57978e+07 6.98901e+06 1.5985e+07 177 1.59503e+07 1.46216e+07 0.00270827 1.5999e+07 50.0763 0.00573529 0.996016 0 50.2946 GTEX-11P7K-1926-SM-5GU6R 0 B1 2 pieces 9 Muscle Muscle - Skeletal 0011907 346 823 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991096 238960 0.984037 0.993819 0.878611 18974 1 76 0.00206813 141 0 6.57127e+07 0.0157215 464490 6.61214e+07 4.35626e+06 18977 3.27057e+07 0 0.105426 0.993819 0.873181 6.57127e+07 0.00281106 1.44307e+07 8.61838e+06 1.44765e+07 165 1.44313e+07 1.286e+07 0.00243858 1.46387e+07 50.3567 0.00702481 0.996542 0 50.0793 GTEX-11P7K-2026-SM-5GU74 0 B1 2 pieces; 20% fibrous content 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 350 819 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.989258 407587 0.975892 0.991781 0.811279 23206 1 76 0.0024604 213 0 8.86646e+07 0.023779 432534 8.93994e+07 5.99018e+06 23231 4.40973e+07 0 0.164613 0.991781 0.804611 8.86646e+07 0.00350015 1.95072e+07 9.72556e+06 1.95849e+07 218 1.95419e+07 1.5555e+07 0.00297895 1.9765e+07 50.2838 0.00483822 0.994303 0 50.0993 GTEX-11P7K-2126-SM-5GU7G 0 B1 6 pieces; well trimmed 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 351 818 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98905 245393 0.969367 0.991975 0.780844 22777 1 76 0.00238161 136 0 5.54854e+07 0.0304341 499494 5.59342e+07 3.80011e+06 22796 2.757e+07 0 0.188523 0.991975 0.774577 5.54854e+07 0.00350299 1.21122e+07 5.8959e+06 1.21833e+07 138 1.21454e+07 8.08371e+06 0.00294064 1.23021e+07 50.3206 0.00893002 0.994899 0 50.1464 GTEX-11P7K-2226-SM-5GU56 0 B1 2 pieces; well trimmed except for internal 20% fatty connective tissue [annotated] 6.3 Nerve Nerve - Tibial 0001323 355 814 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991219 195001 0.970477 0.993253 0.781165 23207 1 76 0.00207671 155 0 6.74477e+07 0.0292206 257420 6.79058e+07 4.0452e+06 23233 3.35525e+07 0 0.189312 0.993253 0.775894 6.74477e+07 0.00287728 1.48252e+07 5.69363e+06 1.49121e+07 156 1.48592e+07 1.12302e+07 0.00247618 1.50092e+07 50.251 0.00379084 0.995288 0 50.1461 GTEX-11P7K-2326-SM-5EGKZ 0 B1 2 pieces; well trimmed 7.5 Blood Vessel Artery - Tibial 0007610 362 807 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98903 263335 0.97765 0.992272 0.868643 21315 1 76 0.00192163 171 0 7.65475e+07 0.0219668 393672 7.71437e+07 6.62892e+06 21325 3.80319e+07 0 0.109007 0.992272 0.86193 7.65475e+07 0.00320187 1.63522e+07 6.29196e+06 1.6472e+07 187 1.64355e+07 1.60676e+07 0.00255966 1.66226e+07 50.283 0.0051031 0.995514 0 50.1824 GTEX-11P81-0002-SM-58Q88 B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P81-0002-SM-5DWT1 B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P81-0002-SM-6WBTV B1 Blood Whole Blood 0013756 1344 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056,LCSET-6242 10/30/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P81-0006-SM-5NQ7A B1 8.6 Blood Whole Blood 0013756 1344 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.989191 555348 0.960959 0.990962 0.791137 18950 1 76 0.00221728 128 0 7.59048e+07 0.0385671 201434 7.65971e+07 6.57253e+06 18962 3.7803e+07 0 0.169822 0.990962 0.783986 7.59048e+07 0.00315013 1.6831e+07 5.71302e+07 1.71431e+07 145 1.71575e+07 1.65978e+07 0.00268287 1.69596e+07 49.71 0.00262979 0.992733 0 50.4593 GTEX-11P81-0008-SM-5S2OT B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 350 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99462 480640 0.976283 0.995906 0.862525 19587 1 76 0.00140464 151 0 7.21519e+07 0.0234357 220953 7.24485e+07 4.68296e+06 19599 3.59545e+07 0 0.113757 0.995906 0.858994 7.21519e+07 0.0020159 1.61936e+07 1.14505e+07 1.62506e+07 160 1.62421e+07 1.82812e+07 0.00170988 1.6304e+07 50.0951 0.00304979 0.997192 0 50.0878 GTEX-11P81-0126-SM-5HL5Y 1 B1 2 pieces, one is ~50% skeletal muscle, fat and fibrous tissue 6.8 Thyroid Thyroid 0002046 234 641 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991188 244231 0.961974 0.993218 0.712517 23252 1 76 0.00207719 115 0 5.64295e+07 0.037775 170852 5.68148e+07 5.60958e+06 23289 2.80846e+07 0 0.249457 0.993218 0.707685 5.64295e+07 0.00312694 1.22925e+07 5.62418e+06 1.23849e+07 120 1.23995e+07 8.48989e+06 0.00260099 1.23856e+07 49.9721 0.00300717 0.995248 0 50.1871 GTEX-11P81-0226-SM-5HL5M 1 B1 2 pieces, hemosiderin-laden macrophages, some interstitial fibrosis and hypertrophy of mucin-secreting cells 7.5 Lung Lung 0008952 236 639 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989308 292279 0.970463 0.992057 0.769663 25026 1 76 0.00227057 158 0 7.36584e+07 0.0288236 235606 7.42482e+07 8.86016e+06 25061 3.66219e+07 0 0.2008 0.992057 0.763549 7.36584e+07 0.00321793 1.62559e+07 9.34112e+06 1.64493e+07 165 1.64972e+07 1.25195e+07 0.00274294 1.64019e+07 49.8551 0.00317322 0.994805 0 50.2957 GTEX-11P81-0326-SM-5HL6B 1 B1 6 pieces, some attached adventitia/fat 7.7 Blood Vessel Artery - Aorta 0001496 239 636 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990985 173638 0.974131 0.992937 0.84671 21131 1 76 0.00192763 146 0 6.64939e+07 0.0254068 211406 6.69669e+07 7.13237e+06 21141 3.31025e+07 0 0.127421 0.992937 0.84073 6.64939e+07 0.0029018 1.43052e+07 5.40697e+06 1.44191e+07 156 1.43988e+07 1.35872e+07 0.00241376 1.44475e+07 50.0845 0.00315687 0.994888 0 50.1982 GTEX-11P81-0526-SM-59873 0 B1 1 piece, c/w atrial appendage 8.3 Heart Heart - Atrial Appendage 0006631 243 632 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986967 254345 0.979142 0.99073 0.830302 21826 1 76 0.00230697 266 0 8.3366e+07 0.0206552 2.29814e+06 8.4146e+07 1.67123e+07 21841 4.145e+07 0 0.148841 0.99073 0.822605 8.3366e+07 0.00568603 1.83384e+07 2.47766e+07 1.77638e+07 273 1.75823e+07 1.09646e+07 0.00399008 1.87612e+07 51.6219 0.0273113 0.994493 0 49.2042 GTEX-11P81-0726-SM-5PNYH 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 255 620 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991708 288923 0.974042 0.992723 0.816664 24237 1 76 0.0029805 273 0 9.45165e+07 0.0256031 786283 9.52094e+07 2.75456e+06 24267 4.70417e+07 0 0.157379 0.992723 0.81072 9.45165e+07 0.00355087 2.07785e+07 9.24319e+06 2.10146e+07 263 2.08882e+07 1.53972e+07 0.00326539 2.09971e+07 50.1301 0.00825846 0.993738 0 50.2824 GTEX-11P81-0826-SM-5P9GR 0 B1 4 pieces, includes few submucosal glands (marked) 9.4 Esophagus Esophagus - Mucosa 0006920 262 613 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991333 375690 0.978807 0.991787 0.843637 24224 1 76 0.00290989 390 0 1.48962e+08 0.0208034 682065 1.50195e+08 4.81541e+06 24254 7.42182e+07 0 0.13517 0.991787 0.836708 1.48962e+08 0.00343766 3.37446e+07 2.48309e+07 3.38982e+07 344 3.38378e+07 3.21857e+07 0.00317365 3.38766e+07 50.0287 0.00454119 0.992241 0 50.1136 GTEX-11P81-0926-SM-59874 1 B1 6 pieces, well trimmed 8.2 Esophagus Esophagus - Muscularis 0004648 260 615 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98543 289980 0.977421 0.989975 0.844377 22237 1 76 0.00246379 211 0 8.47131e+07 0.0222627 917455 8.5571e+07 1.99411e+07 22249 4.20724e+07 0 0.133045 0.989975 0.835911 8.47131e+07 0.00585026 1.83008e+07 9.69789e+06 1.81822e+07 243 1.82727e+07 1.47161e+07 0.00414925 1.85514e+07 50.3784 0.0107216 0.994519 0 49.8375 GTEX-11P81-1026-SM-5GU54 1 B1 6 pieces, small focus of squamous mucosa, may not be present in block 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 264 611 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991535 280126 0.973589 0.993826 0.80036 21942 1 76 0.00179297 141 0 6.50906e+07 0.0261398 705581 6.54949e+07 4.16708e+06 21962 3.23882e+07 0 0.17323 0.993826 0.795418 6.50906e+07 0.00255917 1.41123e+07 6.27386e+06 1.42066e+07 158 1.41777e+07 1.05882e+07 0.00217519 1.42841e+07 50.1868 0.0107731 0.996117 0 50.1664 GTEX-11P81-1126-SM-5GU5G 1 B1 6 pieces, each containing muscularis and varying amounts of mucosa 8.2 Colon Colon - Transverse 0001157 268 607 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989333 470815 0.97392 0.992635 0.807066 23340 1 76 0.00176529 207 0 8.19426e+07 0.0257683 589489 8.25506e+07 5.23621e+06 23367 4.0712e+07 0 0.166854 0.992635 0.801121 8.19426e+07 0.00278624 1.78324e+07 7.21546e+06 1.79326e+07 206 1.79411e+07 1.42129e+07 0.00227407 1.80784e+07 50.1906 0.00714094 0.995936 0 50.1401 GTEX-11P81-1326-SM-5GU5S 1 B1 2 pieces, congested 7.1 Spleen Spleen 0002106 278 597 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988585 357036 0.963679 0.99153 0.790521 23137 1 76 0.00243764 130 0 6.01574e+07 0.0348629 358502 6.06713e+07 4.2066e+06 23156 2.98622e+07 0 0.173157 0.99153 0.783826 6.01574e+07 0.00330981 1.32181e+07 1.07416e+07 1.33078e+07 144 1.33303e+07 9.71708e+06 0.00287243 1.33691e+07 50.0727 0.00590892 0.994475 0 50.1691 GTEX-11P81-1426-SM-5P9JN 1 B1 7 pieces, predominantly muscularis (target) with few strips of mucosa (not target) 7.6 Colon Colon - Sigmoid 0001159 286 589 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992909 148306 0.979584 0.993495 0.867869 22235 1 76 0.00296859 289 0 8.87194e+07 0.0201103 725175 8.93003e+07 2.96769e+06 22247 4.42174e+07 0 0.111715 0.993495 0.862224 8.87194e+07 0.00327836 1.93e+07 8.31864e+06 1.94616e+07 263 1.93855e+07 1.72427e+07 0.00312339 1.94276e+07 50.0542 0.00812064 0.994082 0 50.2085 GTEX-11P81-1526-SM-5P9GS 0 B1 2 pieces 8.5 Ovary Ovary 0000992 282 593 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992432 386353 0.96934 0.992686 0.76189 25869 1 76 0.0028467 285 0 1.33332e+08 0.0303062 146073 1.34315e+08 4.34317e+06 25926 6.64e+07 0 0.20745 0.992686 0.756318 1.33332e+08 0.00331155 2.94362e+07 1.5954e+07 2.95697e+07 317 2.95502e+07 2.68872e+07 0.00307907 2.94981e+07 49.956 0.00108754 0.99294 0 50.1131 GTEX-11P81-1626-SM-5BC52 0 B1 2 pieces 8.3 Uterus Uterus 0000995 289 586 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98798 354198 0.969173 0.991737 0.741092 23259 1 76 0.00269882 148 0 7.47169e+07 0.030501 145288 7.53394e+07 2.02985e+07 23292 3.71163e+07 0 0.22808 0.991737 0.734968 7.47169e+07 0.00463948 1.62279e+07 7.08051e+06 1.64267e+07 153 1.65133e+07 1.22958e+07 0.00366548 1.6408e+07 49.84 0.00192845 0.995493 0 50.3043 GTEX-11P81-1926-SM-5BC53 1 B1 2 pieces, 1 piece is predominantly fat with 5-10% fibrous component with ductal/lobular elements, 1 piece is entirely fat 7.6 Breast Breast - Mammary Tissue 0008367 311 564 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98633 310226 0.968219 0.990453 0.76263 25019 1 76 0.00287269 146 0 7.19545e+07 0.0308634 425739 7.26481e+07 1.82588e+07 25050 3.57071e+07 0 0.205589 0.990453 0.75535 7.19545e+07 0.00507608 1.57673e+07 9.30568e+06 1.58432e+07 156 1.59271e+07 1.15894e+07 0.0039698 1.59617e+07 50.0542 0.00586029 0.994576 0 50.1201 GTEX-11P81-2026-SM-5P9GT 1 B1 3 pieces, excellent specimen, small detached fragment of squamous mucosa 8.2 Salivary Gland Minor Salivary Gland 0006330 315 560 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991089 300741 0.976271 0.991292 0.830747 24739 1 76 0.00293896 385 0 1.16572e+08 0.0229919 326926 1.17596e+08 3.76627e+06 24770 5.80383e+07 0 0.145525 0.991292 0.823513 1.16572e+08 0.00346529 2.62328e+07 2.31866e+07 2.63973e+07 334 2.63703e+07 2.2091e+07 0.00320207 2.62889e+07 49.9227 0.00278009 0.991496 0 50.1563 GTEX-11P81-2126-SM-5HL6N 1 B1 6 pieces 7.3 Vagina Vagina 0000996 337 538 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989777 266261 0.970144 0.992469 0.748242 23724 1 76 0.00218222 148 0 7.28603e+07 0.0296113 171402 7.34132e+07 8.94601e+06 23754 3.62447e+07 0 0.221902 0.992469 0.742607 7.28603e+07 0.00317247 1.6165e+07 9.55415e+06 1.62828e+07 155 1.63202e+07 1.2648e+07 0.002676 1.63174e+07 49.9958 0.00233476 0.995161 0 50.1815 GTEX-11P81-2226-SM-5PNYI 0 B1 5 pieces, 3 of 5 include significant attached fat from 30-50% 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 337 538 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991702 243238 0.971922 0.992586 0.812745 23625 1 76 0.00299053 228 0 8.79123e+07 0.0278894 704910 8.8569e+07 2.59011e+06 23658 4.3776e+07 0 0.159177 0.992586 0.806719 8.79123e+07 0.0035266 1.92968e+07 9.54225e+06 1.94533e+07 228 1.9343e+07 1.45576e+07 0.00325833 1.94882e+07 50.1869 0.00795888 0.99347 0 50.2019 GTEX-11P81-2326-SM-59875 0 B1 6 pieces, epidermis and dermis with 10-20% attached and internal fat, squamous epithelium measures 35-40 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 350 525 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983943 308695 0.968486 0.988876 0.795413 23947 1 76 0.0026484 180 0 7.32288e+07 0.031228 483540 7.40526e+07 1.70484e+07 23970 3.63511e+07 0 0.173073 0.988876 0.786564 7.32288e+07 0.00658875 1.58466e+07 1.16142e+07 1.5927e+07 158 1.60521e+07 1.29321e+07 0.00460874 1.60588e+07 50.0104 0.00652968 0.993809 0 50.1265 GTEX-11P81-2426-SM-5GU65 0 B1 2 pieces 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 345 530 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990629 407861 0.972064 0.992883 0.781999 23882 1 76 0.0021667 173 0 8.12373e+07 0.0276293 508332 8.18196e+07 5.48756e+06 23913 4.03898e+07 0 0.190065 0.992883 0.776433 8.12373e+07 0.00320876 1.78379e+07 7.64624e+06 1.79188e+07 195 1.78842e+07 1.3328e+07 0.00268655 1.8046e+07 50.2251 0.00621284 0.995137 0 50.113 GTEX-11P81-2526-SM-5GU6H 1 B1 2 pieces, one piece includes small portion of internal fat 8 Muscle Muscle - Skeletal 0011907 348 527 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990997 238344 0.9843 0.993848 0.878962 18575 1 76 0.00156478 126 0 5.66209e+07 0.0154892 598945 5.69714e+07 3.62999e+06 18580 2.81699e+07 0 0.105338 0.993848 0.873555 5.66209e+07 0.00245247 1.23192e+07 7.17143e+06 1.24387e+07 144 1.23932e+07 1.11413e+07 0.00200735 1.2514e+07 50.2425 0.0105131 0.9967 0 50.2413 GTEX-11P81-2626-SM-5GU6T 0 B1 2 pieces, well trimmed 7.6 Nerve Nerve - Tibial 0001323 361 514 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990308 241890 0.966261 0.992956 0.753954 22878 1 76 0.00193018 136 0 5.54561e+07 0.0334265 187893 5.58495e+07 3.51152e+06 22902 2.75718e+07 0 0.212307 0.992956 0.748643 5.54561e+07 0.00284153 1.21717e+07 4.67632e+06 1.2254e+07 128 1.22512e+07 8.98656e+06 0.00238464 1.23159e+07 50.1317 0.00336427 0.995603 0 50.1683 GTEX-11P81-2726-SM-59876 1 B1 2 pieces, well trimmed 6.6 Blood Vessel Artery - Tibial 0007610 362 513 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983389 214152 0.975693 0.988722 0.841121 21319 1 76 0.00251998 145 0 6.87781e+07 0.0239052 535318 6.95626e+07 1.4071e+07 21327 3.41181e+07 0 0.134572 0.988722 0.831635 6.87781e+07 0.00688584 1.4705e+07 6.3929e+06 1.48514e+07 153 1.49316e+07 1.32997e+07 0.00469114 1.49643e+07 50.0548 0.00769549 0.994055 0 50.2477 GTEX-11P82-0003-SM-58Q7E B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11P82-0003-SM-5DWRC B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11P82-0003-SM-6WBSX B1 Blood Whole Blood 0013756 -114 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11P82-0006-SM-5N9FY B1 8.7 Blood Whole Blood 0013756 -114 BP-39959 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986786 1.04779e+06 0.958623 0.988511 0.802044 19880 1 76 0.00444814 159 0 9.77415e+07 0.0407767 447300 9.88775e+07 4.86094e+06 19894 4.85803e+07 0 0.156579 0.988511 0.79283 9.77415e+07 0.00454314 2.17309e+07 7.58694e+07 2.1952e+07 181 2.19683e+07 2.16882e+07 0.00449556 2.18994e+07 49.9214 0.00452378 0.990237 0 50.2531 GTEX-11P82-0008-SM-5S2MS B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 202 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992123 453745 0.96716 0.993965 0.858632 20290 1 76 0.00155707 162 0 6.79797e+07 0.0326001 258099 6.83924e+07 4.9821e+06 20301 3.38394e+07 0 0.108528 0.993965 0.85345 6.79797e+07 0.00231512 1.47892e+07 1.40642e+07 1.50339e+07 171 1.49666e+07 1.37831e+07 0.00193539 1.49906e+07 50.04 0.0037738 0.995807 0 50.4103 GTEX-11P82-0126-SM-5HL72 1 B1 6 pieces adherent serosa/fibrous tissue up to 2mm; rep delineated 7.3 Blood Vessel Artery - Aorta 0001496 126 919 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992693 189397 0.97548 0.994594 0.84286 21128 1 76 0.00191395 160 0 6.93566e+07 0.0241962 247961 6.97336e+07 7.75712e+06 21141 3.45364e+07 0 0.132621 0.994594 0.838303 6.93566e+07 0.00280518 1.49729e+07 5.30054e+06 1.51308e+07 175 1.50882e+07 1.26413e+07 0.00235871 1.51411e+07 50.0874 0.00355583 0.996495 0 50.2622 GTEX-11P82-0226-SM-5HL4O 1 B1 2 pieces; incidental 3.5mm perithyroidal lymph node encircled; 2.5mm nubbin of attached fat delineated; thyroid unremarkable 6.1 Thyroid Thyroid 0002046 128 918 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.993146 169230 0.969618 0.994822 0.783204 23974 1 76 0.00196854 201 0 7.60267e+07 0.0301302 492016 7.64224e+07 7.64228e+06 24008 3.7875e+07 0 0.186414 0.994822 0.779149 7.60267e+07 0.00279069 1.65743e+07 8.29797e+06 1.67811e+07 203 1.66932e+07 1.11132e+07 0.00237892 1.67791e+07 50.1283 0.00643811 0.996498 0 50.31 GTEX-11P82-0326-SM-5HL51 1 B1 2 pieces, ~15-20% fibrovascular tissue, rep foci delineated; nodule of reactive calcification, unknown significance, ensquared 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 131 915 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99285 210163 0.979517 0.994667 0.839139 21106 1 76 0.00195988 161 0 6.68341e+07 0.0202624 556290 6.71924e+07 6.98563e+06 21119 3.32919e+07 0 0.140378 0.994667 0.834663 6.68341e+07 0.00283819 1.471e+07 9.31772e+06 1.48392e+07 182 1.47501e+07 1.07335e+07 0.00239823 1.49136e+07 50.2756 0.00827906 0.996484 0 50.2186 GTEX-11P82-0426-SM-5HL5D 1 B1 6 pieces, muscularis; attached nubbins of fat/fibrous tissue up to~2.5mm, rep delineated 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 138 909 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991985 250342 0.975371 0.993893 0.827906 22387 1 76 0.00199128 206 0 8.38371e+07 0.0243693 577296 8.43522e+07 8.89228e+06 22405 4.17467e+07 0 0.147465 0.993893 0.82285 8.38371e+07 0.00296985 1.79406e+07 8.87958e+06 1.81796e+07 256 1.80255e+07 1.3848e+07 0.00247962 1.82493e+07 50.3085 0.00684387 0.995801 0 50.3307 GTEX-11P82-0526-SM-5986P 1 B1 6 pieces; squamous mucosa well preserved, up to~0.5mm thick 9 Esophagus Esophagus - Mucosa 0006920 147 901 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985386 233228 0.977062 0.989391 0.839371 21595 1 76 0.00258775 137 0 6.72254e+07 0.0225638 421680 6.79462e+07 1.40011e+07 21609 3.34077e+07 0 0.13769 0.989391 0.830467 6.72254e+07 0.00621717 1.51746e+07 1.07894e+07 1.51411e+07 150 1.5189e+07 1.2962e+07 0.00439511 1.53845e+07 50.3197 0.00620609 0.993396 0 49.9448 GTEX-11P82-0626-SM-5PNYK 1 B1 6 pieces, all muscularis, good specimens 7.9 Esophagus Esophagus - Muscularis 0004648 149 900 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992469 189079 0.977335 0.993235 0.838169 22631 1 76 0.00298046 275 0 9.73253e+07 0.0224073 626248 9.79881e+07 2.89301e+06 22650 4.84852e+07 0 0.139166 0.993235 0.832499 9.73253e+07 0.00329806 2.09307e+07 9.05207e+06 2.13146e+07 283 2.11218e+07 1.66545e+07 0.00313913 2.119e+07 50.0806 0.00639106 0.994001 0 50.4544 GTEX-11P82-0726-SM-5PNYL 1 B1 6 pieces, all muscularis save for residual ~2mm focus of mucosa; rest is sloughed 7.5 Stomach Stomach 0000945 161 889 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992782 201063 0.976497 0.993369 0.82236 22823 1 76 0.00301061 209 0 8.52733e+07 0.0232375 564314 8.58425e+07 2.40307e+06 22847 4.24891e+07 0 0.154137 0.993369 0.816907 8.52733e+07 0.00342279 1.87105e+07 8.82280e+06 1.89464e+07 237 1.88131e+07 1.38227e+07 0.00321658 1.88931e+07 50.1061 0.00657383 0.993956 0 50.3132 GTEX-11P82-0826-SM-5P9GU 1 B1 6 pieces, well preserved, excellent specimens, ~50% lymphoid aggregates, rep areas delineated 8.4 Small Intestine Small Intestine - Terminal Ileum 0001211 165 886 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990597 350857 0.968792 0.991067 0.778816 26400 1 76 0.00324119 380 0 1.33698e+08 0.0305375 748316 1.34903e+08 4.61411e+06 26453 6.65332e+07 0 0.189976 0.991067 0.771859 1.33698e+08 0.00388569 2.93746e+07 1.92329e+07 2.98121e+07 351 2.96228e+07 2.21898e+07 0.00356329 2.96278e+07 50.0043 0.00554705 0.991536 0 50.3696 GTEX-11P82-0926-SM-5986X 0 B1 3 pieces, well preserived sero-mucinous glands are 100% of specimen; excellent. 9.2 Salivary Gland Minor Salivary Gland 0006330 164 888 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.98122 313581 0.975524 0.985549 0.811741 23841 1 76 0.00295815 212 0 8.22619e+07 0.0236728 187983 8.34681e+07 1.87585e+07 23868 4.08358e+07 0 0.163783 0.985549 0.80001 8.22619e+07 0.00638027 1.87244e+07 2.35988e+07 1.84516e+07 213 1.85403e+07 1.38239e+07 0.0046617 1.89765e+07 50.5814 0.00225215 0.989877 0 49.633 GTEX-11P82-1026-SM-5BC5J 1 B1 6 pieces, mucosa is ~0.3mm thick, ~ 5% thickness 7.2 Colon Colon - Transverse 0001157 168 884 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984434 300883 0.975236 0.989698 0.812535 22185 1 76 0.00299572 145 0 6.23205e+07 0.0234201 1.37208e+06 6.29692e+07 1.49856e+07 22204 3.08703e+07 0 0.162701 0.989698 0.804164 6.23205e+07 0.00578366 1.38715e+07 1.09854e+07 1.3861e+07 160 1.38374e+07 8.24152e+06 0.00438228 1.4194e+07 50.6362 0.0217897 0.994962 0 49.9811 GTEX-11P82-1126-SM-5BC5K 1 B1 2 pieces, well-preserved glandular elements, no abnormalities 7.2 Prostate Prostate 0002367 171 882 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987794 265548 0.965627 0.991813 0.760818 24322 1 76 0.00276599 132 0 6.64825e+07 0.0341213 305500 6.70313e+07 1.92688e+07 24353 3.30257e+07 0 0.204809 0.991813 0.754589 6.64825e+07 0.00493687 1.44702e+07 7.81721e+06 1.46381e+07 151 1.46347e+07 9.16029e+06 0.00384703 1.47241e+07 50.1523 0.00455757 0.995833 0 50.2883 GTEX-11P82-1226-SM-5HL5P 1 B1 2 pieces, ~20% adherent serosa/fat, delineated 7 Colon Colon - Sigmoid 0001159 175 878 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.991706 219366 0.978991 0.993655 0.816854 21828 1 76 0.00203134 136 0 6.34757e+07 0.020747 382907 6.38811e+07 6.81878e+06 21846 3.16049e+07 0 0.162136 0.993655 0.811671 6.34757e+07 0.00295799 1.39731e+07 6.10786e+06 1.40903e+07 157 1.40346e+07 1.0408e+07 0.00249376 1.41464e+07 50.1983 0.00599406 0.995605 0 50.2089 GTEX-11P82-1326-SM-5HL62 0 B1 2 pieces, fibroadipose tissue, no ductal elements seen 7.5 Breast Breast - Mammary Tissue 0008367 182 872 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99218 206544 0.981737 0.994078 0.835862 20241 1 76 0.00200061 202 0 7.11667e+07 0.0180455 668302 7.15906e+07 7.60472e+06 20255 3.54492e+07 0 0.145875 0.994078 0.830912 7.11667e+07 0.00294491 1.56457e+07 1.19532e+07 1.57914e+07 203 1.5714e+07 1.18052e+07 0.00247186 1.58518e+07 50.2183 0.00933505 0.995975 0 50.2317 GTEX-11P82-1426-SM-5BC5L 0 B1 6 pieces, squamous epithelium is ~60 microns, trace adherent dermal fat, delineated 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 185 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.98669 508744 0.96769 0.991224 0.800179 22983 1 76 0.00272672 175 0 7.43483e+07 0.0320213 546822 7.50066e+07 1.91573e+07 23006 3.68989e+07 0 0.167511 0.991224 0.793157 7.43483e+07 0.0055977 1.61123e+07 1.49456e+07 1.6263e+07 168 1.63056e+07 1.26948e+07 0.00415565 1.64027e+07 50.1483 0.00729032 0.995758 0 50.2327 GTEX-11P82-1426-SM-DTXFY 0 B1 6 pieces, squamous epithelium is ~60 microns, trace adherent dermal fat, delineated 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 185 870 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993439 775345 0.971399 0.994396 0.800467 23780 1 76 0.00207832 227 0 9.16048e+07 0.0283587 674943 9.21211e+07 5.02194e+06 23814 4.56254e+07 0 0.170932 0.994396 0.795981 9.16048e+07 0.00249696 2.01104e+07 1.06958e+07 2.02795e+07 232 2.03348e+07 1.54828e+07 0.00228743 2.01405e+07 49.76 0.0073267 0.995352 0 50.2094 GTEX-11P82-1526-SM-5BC5M 0 B1 2 pieces, spermatogenesis is present 6.7 Testis Testis 0000473 186 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986102 361120 0.933013 0.990461 0.751283 32284 1 76 0.002774 148 0 7.41588e+07 0.0667263 1.51861e+06 7.4873e+07 2.09396e+07 32333 3.68341e+07 0 0.18173 0.990461 0.744117 7.41588e+07 0.00485468 1.54469e+07 1.14915e+07 1.55155e+07 158 1.55837e+07 1.11334e+07 0.00380976 1.56617e+07 50.1249 0.0202825 0.994821 0 50.1107 GTEX-11P82-1626-SM-59879 0 B1 6 pieces squamous epithelium is ~50-60 microns; nubbins of adherent dermal fat up to ~2mm, delineated 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 194 862 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983254 252589 0.9752 0.98836 0.811627 24062 1 76 0.00269583 216 0 8.38077e+07 0.024572 824449 8.47947e+07 2.06165e+07 24090 4.15988e+07 0 0.163573 0.98836 0.80218 8.38077e+07 0.00614683 1.84302e+07 1.0632e+07 1.84586e+07 219 1.85249e+07 1.30497e+07 0.00441241 1.87607e+07 50.3162 0.00972288 0.993466 0 50.0384 GTEX-11P82-1726-SM-5Q5AT 0 B1 2 pieces, ~30% fibrous/fascial tissue, delineated 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 195 862 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990824 158870 0.980717 0.992801 0.848977 21979 1 76 0.00172703 205 0 7.57512e+07 0.0190057 364974 7.63005e+07 5.97396e+06 21997 3.77192e+07 0 0.13174 0.992801 0.842865 7.57512e+07 0.00259514 1.66992e+07 7.61512e+06 1.68463e+07 206 1.6805e+07 1.44107e+07 0.00216022 1.68891e+07 50.1248 0.00478338 0.994778 0 50.2193 GTEX-11P82-1826-SM-5PNYJ 0 B1 2 pieces, trace interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 197 860 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993644 265889 0.983947 0.994329 0.872543 20422 1 76 0.0028955 376 0 1.15209e+08 0.0158558 1.22479e+06 1.15867e+08 3.06638e+06 20434 5.7433e+07 0 0.111405 0.994329 0.867594 1.15209e+08 0.00328101 2.53404e+07 1.82187e+07 2.57543e+07 338 2.54808e+07 2.09762e+07 0.00308812 2.56842e+07 50.1987 0.0105707 0.995014 0 50.405 GTEX-11P82-1926-SM-5Q5AU 0 B1 2 pieces, clean specimens 5.7 Nerve Nerve - Tibial 0001323 198 860 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986107 170621 0.971465 0.988282 0.80269 23502 1 76 0.0018869 169 0 7.49326e+07 0.0282909 582765 7.58211e+07 6.02148e+06 23529 3.72535e+07 0 0.168775 0.988282 0.793284 7.49326e+07 0.00290913 1.64696e+07 8.86373e+06 1.65517e+07 196 1.64406e+07 1.13767e+07 0.00239689 1.67378e+07 50.4479 0.00768606 0.990457 0 50.1242 GTEX-11PRG-0004-SM-58Q9A C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11PRG-0004-SM-5DWRB C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11PRG-0004-SM-6WBUN C1 Blood Whole Blood 0013756 627 BP-40040 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11PRG-0005-SM-5NQ6X C1 8.6 Blood Whole Blood 0013756 627 BP-40083 RNA isolation_PAXgene Blood RNA (Manual) 06/21/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.944977 649725 0.966367 0.946599 0.78483 16996 1 76 0.00187171 87 0 8.65373e+07 0.031553 71068 9.14192e+07 7.91096e+06 17002 4.30208e+07 0 0.181537 0.946599 0.742919 8.65373e+07 0.00323027 2.00678e+07 1.85508e+08 2.05623e+07 125 2.04605e+07 2.44862e+07 0.00254982 2.0315e+07 49.8216 0.000777386 0.94822 0 50.6086 GTEX-11PRG-0008-SM-5S2N5 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 845 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.994507 377109 0.969297 0.995771 0.864015 19644 1 76 0.00164074 143 0 6.37792e+07 0.0304892 276789 6.40501e+07 4.48886e+06 19653 3.17853e+07 0 0.105282 0.995771 0.860361 6.37792e+07 0.00231675 1.39096e+07 1.29034e+07 1.41225e+07 152 1.40558e+07 1.41551e+07 0.00197832 1.40689e+07 50.0232 0.00432145 0.997036 0 50.3797 GTEX-11PRG-0011-R10a-SM-AHZML C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 644 ChIP-Seq GTEX-11PRG-0011-R10b-SM-CYKQG C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 RIP-Seq GTEX-11PRG-0011-R10b-SM-DO93G C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995482 563488 0.96402 0.996233 0.851189 23524 1 76 0.00234185 269 0 8.20266e+07 0.0353485 3.15965e+06 8.23367e+07 4.69789e+06 23544 4.08816e+07 0 0.112831 0.996233 0.847983 8.20266e+07 0.002846 1.79616e+07 1.22722e+07 1.80823e+07 274 1.80681e+07 1.16014e+07 0.00259374 1.80282e+07 49.9446 0.0383747 0.996985 0 50.1674 GTEX-11PRG-0011-R11b-SM-DNZZY C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 644 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985901 941144 0.948443 0.990194 0.751132 24933 1 76 0.00290603 273 0 1.14635e+08 0.0510556 1.82734e+06 1.1577e+08 1.25978e+07 24983 5.68813e+07 0 0.197311 0.990194 0.743766 1.14635e+08 0.0048071 2.46482e+07 1.85349e+07 2.48053e+07 291 2.50344e+07 1.51336e+07 0.00385245 2.48584e+07 49.8236 0.0157842 0.994487 0 50.1589 GTEX-11PRG-0011-R2a-SM-69LQ5 C1, A1 6 Brain Brain - Substantia nigra 0002038 644 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992538 431908 0.963932 0.994327 0.859855 20901 1 76 0.00303656 162 0 6.18264e+07 0.035907 6.1873e+06 6.21791e+07 3.61568e+06 20911 3.07859e+07 0 0.104077 0.994327 0.854977 6.18264e+07 0.0040064 1.36144e+07 1.8881e+07 1.36769e+07 195 1.34202e+07 4.71638e+06 0.00352061 1.39788e+07 51.0193 0.0995077 0.996117 0 50.1145 GTEX-11PRG-0011-R4a-SM-DNZZR C1, A1 7.6 Brain Brain - Amygdala 0001876 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987716 754079 0.963427 0.991933 0.859708 24335 1 76 0.00297628 375 0 1.0749e+08 0.0361894 8.4858e+06 1.08364e+08 9.71239e+06 24355 5.3382e+07 0 0.103719 0.991933 0.852773 1.0749e+08 0.0055369 2.33747e+07 2.33528e+07 2.37533e+07 338 2.38464e+07 1.26665e+07 0.00425115 2.36736e+07 49.8182 0.0783083 0.99615 0 50.4017 GTEX-11PRG-0011-R5b-SM-DNZZS C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988483 675603 0.963312 0.992339 0.861153 24042 1 76 0.00310517 272 0 1.00512e+08 0.0363228 6.61231e+06 1.01288e+08 1.05384e+07 24058 4.99342e+07 0 0.102159 0.992339 0.854555 1.00512e+08 0.00497996 2.17782e+07 2.14302e+07 2.21833e+07 314 2.22446e+07 1.21269e+07 0.00403893 2.20498e+07 49.7801 0.0652824 0.996194 0 50.4607 GTEX-11PRG-0011-R6b-SM-DO923 C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995218 624876 0.966477 0.995919 0.856932 23783 1 76 0.00275912 376 0 9.68862e+07 0.0332035 8.85782e+06 9.72832e+07 5.01558e+06 23801 4.83003e+07 0 0.109545 0.995919 0.853435 9.68862e+07 0.00301967 2.11275e+07 1.94249e+07 2.1615e+07 335 2.14859e+07 1.16072e+07 0.0028893 2.13143e+07 49.7996 0.0910518 0.996621 0 50.5702 GTEX-11PRG-0011-R7a-SM-DNZZT C1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 644 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988609 769639 0.958422 0.992509 0.860164 23698 1 76 0.00294763 272 0 1.01948e+08 0.0412654 6.5015e+06 1.02718e+08 1.02486e+07 23716 5.06626e+07 0 0.0982574 0.992509 0.853721 1.01948e+08 0.00500277 2.20142e+07 2.68281e+07 2.2417e+07 304 2.24224e+07 1.2044e+07 0.00397116 2.23527e+07 49.9222 0.063295 0.996409 0 50.4533 GTEX-11PRG-0126-SM-5BC55 0 C1 2 pieces; nubbins of adherent fat up to ~1mm, delineated 6.1 Nerve Nerve - Tibial 0001323 831 883 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983396 244646 0.957984 0.988621 0.689872 24269 1 76 0.00307446 143 0 6.24021e+07 0.0417979 292869 6.31204e+07 1.73068e+07 24311 3.09305e+07 0 0.268111 0.988621 0.682023 6.24021e+07 0.00581989 1.34852e+07 7.73692e+06 1.36495e+07 135 1.37122e+07 7.56727e+06 0.00443992 1.37323e+07 50.0367 0.00463985 0.993846 0 50.3028 GTEX-11PRG-0326-SM-5GU53 0 C1 2 pieces, ~20% interstitial fat, rep. delineated 7.7 Muscle Muscle - Skeletal 0011907 837 878 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991665 338185 0.981925 0.994199 0.860763 20051 1 76 0.00206887 123 0 6.56687e+07 0.0178256 652457 6.60519e+07 4.36676e+06 20062 3.2674e+07 0 0.121163 0.994199 0.855769 6.56687e+07 0.00292321 1.40712e+07 6.20414e+06 1.41612e+07 142 1.41576e+07 1.39449e+07 0.00249495 1.42239e+07 50.1169 0.00987795 0.996732 0 50.1594 GTEX-11PRG-0626-SM-5BC56 0 C1 2 pieces, ~40% fibrous/fascial tissue, delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 846 870 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987485 245256 0.973023 0.991397 0.765319 23499 1 76 0.00293989 135 0 6.62724e+07 0.0266709 278731 6.68475e+07 1.65879e+07 23531 3.29153e+07 0 0.207704 0.991397 0.758735 6.62724e+07 0.00523141 1.44902e+07 7.24496e+06 1.46198e+07 143 1.46775e+07 1.08132e+07 0.00408113 1.46796e+07 50.0035 0.00416966 0.995309 0 50.2226 GTEX-11PRG-0726-SM-5EGL1 0 C1 6 pieces, squamous epithelium is ~40-50microns; trace nubbin adherent dermal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 849 868 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986118 227978 0.970079 0.989957 0.747747 23096 1 76 0.00243998 158 0 7.58393e+07 0.0297224 511672 7.66088e+07 6.67656e+06 23130 3.76453e+07 0 0.222332 0.989957 0.740237 7.58393e+07 0.00374049 1.66127e+07 1.06361e+07 1.67265e+07 171 1.67251e+07 1.03303e+07 0.00308771 1.68869e+07 50.2407 0.00667903 0.993795 0 50.1706 GTEX-11PRG-0826-SM-5EQ6A 1 C1 2 pieces, gynecomastoid stromal/ductal hyperplasia; stroma encircled, rep ducts delineated 7 Breast Breast - Mammary Tissue 0008367 852 865 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.98917 359175 0.969699 0.992115 0.744921 24451 1 76 0.00234688 141 0 6.98187e+07 0.0300172 239779 7.03735e+07 8.34961e+06 24485 3.46724e+07 0 0.224777 0.992115 0.739048 6.98187e+07 0.00357657 1.53295e+07 7.48941e+06 1.54549e+07 151 1.54547e+07 1.13199e+07 0.0029599 1.55258e+07 50.1147 0.00340723 0.995061 0 50.2036 GTEX-11PRG-0926-SM-5EGI8 2 C1 2 pieces, moderate congestion/edema 5.8 Lung Lung 0008952 854 864 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980036 222764 0.969003 0.985433 0.807593 23940 1 76 0.00278925 139 0 7.00468e+07 0.0306667 538690 7.10823e+07 1.07875e+07 23960 3.47283e+07 0 0.161409 0.985433 0.795829 7.00468e+07 0.00621948 1.52454e+07 7.68063e+06 1.54598e+07 160 1.55397e+07 1.1202e+07 0.00449497 1.55251e+07 49.9764 0.0075784 0.990829 0 50.3492 GTEX-11PRG-1526-SM-5HL6Z 1 C1 2 pieces, no abnormalities; minimal fibrosis 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 886 835 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.988337 190187 0.976997 0.990529 0.82638 22464 1 76 0.00231603 140 0 6.04825e+07 0.0226756 244285 6.10608e+07 6.51952e+06 22482 3.00784e+07 0 0.150617 0.990529 0.818553 6.04825e+07 0.00352015 1.3318e+07 7.19741e+06 1.34084e+07 147 1.33802e+07 1.1072e+07 0.00291676 1.34796e+07 50.1851 0.00400069 0.992721 0 50.169 GTEX-11PRG-2026-SM-5GU5F 1 C1 6 pieces, musularis and serosa 5.8 Colon Colon - Sigmoid 0001159 902 823 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988904 207208 0.973803 0.9917 0.786352 22913 1 76 0.00232871 134 0 6.27688e+07 0.0258836 658747 6.32941e+07 4.19642e+06 22932 3.11782e+07 0 0.187451 0.9917 0.779825 6.27688e+07 0.00323552 1.36886e+07 6.91122e+06 1.37793e+07 148 1.37391e+07 9.47132e+06 0.00278083 1.38988e+07 50.289 0.0104077 0.994497 0 50.1651 GTEX-11PRG-2226-SM-5GU5R 3 C1 6 pieces, appears completely infarcted/autolyzed, ? end stage renal dz; specimen sequenced and fingerprint confirmed as match to other donor specimens 6 Kidney Kidney - Cortex 0001225 931 795 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.970007 345827 0.968241 0.972983 0.779699 23365 1 76 0.0062501 276 0 1.16362e+08 0.0175968 289141 1.19593e+08 7.7377e+06 23396 5.68667e+07 0 0.188542 0.972983 0.758634 1.16362e+08 0.00716905 2.67576e+07 7.77294e+07 2.67888e+07 310 2.70756e+07 1.54173e+07 0.00670817 2.68321e+07 49.7742 0.00241771 0.975959 0 50.0292 GTEX-11PRG-2826-SM-5BC54 1 C1 4 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 995 737 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987248 277171 0.946648 0.991288 0.715554 23509 1 76 0.00318115 123 0 6.68678e+07 0.0530425 1.16184e+06 6.74555e+07 1.56626e+07 23532 3.32085e+07 0 0.231095 0.991288 0.70932 6.68678e+07 0.00551406 1.43449e+07 1.11026e+07 1.44781e+07 142 1.45441e+07 7.46602e+06 0.00434285 1.45267e+07 49.97 0.0172238 0.995327 0 50.2312 GTEX-11PRG-2926-SM-5987A 1 C1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 996 736 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.987167 343199 0.966858 0.991104 0.844037 23335 1 76 0.00332179 151 0 7.34738e+07 0.0327254 2.79431e+06 7.41333e+07 1.50653e+07 23352 3.65098e+07 0 0.122821 0.991104 0.836528 7.34738e+07 0.0067022 1.62952e+07 1.4676e+07 1.59607e+07 197 1.59587e+07 8.86991e+06 0.00500528 1.65503e+07 50.91 0.0376931 0.99504 0 49.4814 GTEX-11TT1-0001-SM-58Q8E B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TT1-0001-SM-5DWT7 B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11TT1-0001-SM-6WBTZ B1 Blood Whole Blood 0013756 -59 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11TT1-0004-SM-5S2NT B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -59 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991664 622943 0.962377 0.993718 0.824796 19764 1 76 0.00209634 145 0 6.35264e+07 0.0370511 535487 6.39281e+07 4.62427e+06 19776 3.15909e+07 0 0.137581 0.993718 0.819615 6.35264e+07 0.00288721 1.38735e+07 1.39697e+07 1.40218e+07 148 1.3981e+07 1.3376e+07 0.00249096 1.40597e+07 50.1404 0.0083764 0.995771 0 50.2658 GTEX-11TT1-0005-SM-5NQ8Y B1 8.5 Blood Whole Blood 0013756 -59 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990653 569451 0.967113 0.992152 0.824574 19397 1 76 0.00229737 156 0 8.925e+07 0.032371 405239 8.9956e+07 7.43464e+06 19409 4.44583e+07 0 0.142539 0.992152 0.818102 8.925e+07 0.00317109 1.97723e+07 5.31062e+07 1.99779e+07 202 1.99585e+07 1.96321e+07 0.00273357 1.99314e+07 49.966 0.00450486 0.99365 0 50.2586 GTEX-11TT1-0008-SM-5S2P8 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 134 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992494 412155 0.964803 0.993535 0.868017 18770 1 76 0.00150869 149 0 6.26277e+07 0.0350012 250215 6.30352e+07 3.46202e+06 18777 3.12145e+07 0 0.0967851 0.993535 0.862406 6.26277e+07 0.00217114 1.367e+07 1.67625e+07 1.39479e+07 153 1.38794e+07 1.40869e+07 0.00183957 1.38196e+07 49.8919 0.00396945 0.994577 0 50.5031 GTEX-11TT1-0126-SM-5LUAA 0 B1 2 pieces 9.7 Adrenal Gland Adrenal Gland 0002369 54 481 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991732 257760 0.978162 0.993599 0.844452 21484 1 76 0.00453413 120 0 6.17437e+07 0.0214285 1.12511e+06 6.21415e+07 5.23865e+06 21497 3.07237e+07 0 0.13371 0.993599 0.839047 6.17437e+07 0.00367373 1.37196e+07 7.71734e+06 1.37747e+07 135 1.37732e+07 1.18449e+07 0.00410474 1.38324e+07 50.1072 0.0181057 0.995466 0 50.1002 GTEX-11TT1-0326-SM-5LUAY 1 B1 2 pieces 7.7 Pancreas Pancreas 0001150 57 478 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991247 308365 0.969386 0.993358 0.831277 20999 1 76 0.00461112 114 0 5.74283e+07 0.0304285 286664 5.78123e+07 5.00842e+06 21012 2.85597e+07 0 0.138108 0.993358 0.825756 5.74283e+07 0.00400082 1.29795e+07 1.20645e+07 1.3146e+07 115 1.3138e+07 1.44167e+07 0.00430662 1.31168e+07 49.9596 0.00495853 0.995468 0 50.3185 GTEX-11TT1-0426-SM-5EGI9 0 B1 6 pieces, well trimmed 9.1 Esophagus Esophagus - Muscularis 0004648 59 476 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.987525 183429 0.979316 0.991698 0.868023 20347 1 76 0.00225719 134 0 5.98394e+07 0.0203895 701877 6.03404e+07 8.87567e+06 20355 2.97305e+07 0 0.111292 0.991698 0.860817 5.98394e+07 0.00513194 1.29863e+07 5.99826e+06 1.30137e+07 142 1.30216e+07 1.13935e+07 0.00368852 1.32074e+07 50.3541 0.011632 0.99587 0 50.0527 GTEX-11TT1-0526-SM-5P9JO 1 B1 6 pieces, few groups of submucosal glands (marked), detached fragment of adrenal tissue 9.4 Esophagus Esophagus - Mucosa 0006920 60 475 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991627 199652 0.981743 0.992142 0.868409 21953 1 76 0.00332312 208 0 8.67638e+07 0.0178612 594125 8.7451e+07 2.9029e+06 21965 4.32367e+07 0 0.113334 0.992142 0.861585 8.67638e+07 0.00355497 1.96383e+07 1.24294e+07 1.97449e+07 231 1.96845e+07 1.8928e+07 0.00343898 1.97436e+07 50.075 0.00679381 0.992656 0 50.1353 GTEX-11TT1-0626-SM-5GU4X 0 B1 6 pieces, well trimmed, rare group of submucosal glands (marked) 8.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 61 474 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990328 303012 0.9776 0.993284 0.857828 20897 1 76 0.00187616 139 0 6.8466e+07 0.0221175 594383 6.89288e+07 4.86126e+06 20905 3.40544e+07 0 0.119772 0.993284 0.852067 6.8466e+07 0.00272376 1.48233e+07 5.97863e+06 1.50335e+07 164 1.49908e+07 1.32221e+07 0.0022987 1.50559e+07 50.1083 0.00862314 0.996241 0 50.352 GTEX-11TT1-0726-SM-5GU5A 1 B1 6 pieces, acute hemorrhagic gastropathy 7.2 Stomach Stomach 0000945 64 471 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.986386 193947 0.980686 0.988773 0.864724 21200 1 76 0.001726 237 0 5.58079e+07 0.0190077 1.13421e+06 5.64416e+07 3.56598e+06 21212 2.77587e+07 0 0.115962 0.988773 0.855016 5.58079e+07 0.00269616 1.28051e+07 4.92106e+07 1.29544e+07 155 1.29691e+07 1.53311e+07 0.00220991 1.29227e+07 49.9104 0.0200953 0.99116 0 50.2898 GTEX-11TT1-0926-SM-5GU5M 1 B1 6 pieces, predominantly well trimmed with few strips of mucosa (marked) 8.7 Colon Colon - Sigmoid 0001159 73 462 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992014 282614 0.980665 0.994422 0.863865 21284 1 76 0.00183275 142 0 6.383e+07 0.0190714 525744 6.4188e+07 4.44587e+06 21295 3.177e+07 0 0.1168 0.994422 0.859046 6.383e+07 0.00265989 1.40228e+07 5.41527e+06 1.41577e+07 152 1.41223e+07 1.30193e+07 0.00224532 1.42047e+07 50.1455 0.00819069 0.99683 0 50.2393 GTEX-11TT1-1026-SM-5PNW7 1 B1 6 pieces, predominantly mucosa with few strips of muscularis, edema and ischemic change 8.2 Colon Colon - Transverse 0001157 78 457 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991861 200997 0.97504 0.993451 0.819542 22933 1 76 0.00211706 190 0 7.26161e+07 0.0245178 1.39622e+06 7.30948e+07 6.5326e+06 22956 3.61726e+07 0 0.155498 0.993451 0.814175 7.26161e+07 0.00309285 1.61267e+07 9.06222e+06 1.62323e+07 172 1.62017e+07 1.38302e+07 0.00260417 1.62685e+07 50.1027 0.0191014 0.995041 0 50.1632 GTEX-11TT1-1126-SM-5P9GV 0 B1 2 pieces, focus of solid cell nests 7.1 Thyroid Thyroid 0002046 82 453 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992535 230914 0.971181 0.992567 0.792816 24328 1 76 0.00295838 275 0 1.05229e+08 0.0285085 593355 1.06017e+08 3.2235e+06 24371 5.24097e+07 0 0.178365 0.992567 0.786923 1.05229e+08 0.00346196 2.31012e+07 1.03302e+07 2.33143e+07 287 2.31727e+07 1.82233e+07 0.00321017 2.32486e+07 50.0818 0.00559679 0.992599 0 50.2296 GTEX-11TT1-1226-SM-5Q5AV 1 B1 6 pieces 7.1 Blood Vessel Artery - Aorta 0001496 86 449 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992499 228065 0.976175 0.994166 0.85395 21554 1 76 0.00169056 168 0 7.46644e+07 0.0234716 260946 7.51025e+07 5.43228e+06 21566 3.71728e+07 0 0.122225 0.994166 0.848968 7.46644e+07 0.00274868 1.63524e+07 7.17866e+06 1.64637e+07 186 1.64058e+07 1.49144e+07 0.00221873 1.65337e+07 50.1941 0.00347453 0.995834 0 50.1697 GTEX-11TT1-1326-SM-5PNYM 0 B1 2 pieces 8 Heart Heart - Left Ventricle 0006566 88 447 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993293 214834 0.986616 0.994168 0.880987 19951 1 76 0.00320774 268 0 9.68912e+07 0.0131332 4.39931e+06 9.74595e+07 2.61771e+06 19956 4.82852e+07 0 0.105628 0.994168 0.87585 9.68912e+07 0.0035862 2.13852e+07 1.70909e+07 2.1791e+07 292 2.15047e+07 1.60953e+07 0.0033968 2.17491e+07 50.2824 0.0451398 0.995044 0 50.4699 GTEX-11TT1-1426-SM-5EGIA 0 B1 2 pieces, one piece is 40% fat 9 Heart Heart - Atrial Appendage 0006631 89 446 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985444 178020 0.982537 0.990788 0.865531 20420 1 76 0.00247236 124 0 6.04895e+07 0.0171703 1.27917e+06 6.10519e+07 9.18457e+06 20427 3.00203e+07 0 0.117006 0.990788 0.857558 6.04895e+07 0.00575405 1.31838e+07 9.15616e+06 1.31273e+07 144 1.31064e+07 1.07777e+07 0.00410435 1.34930e+07 50.7268 0.0209521 0.996131 0 49.8926 GTEX-11TT1-1526-SM-5EQKU 1 B1 2 pieces, one piece is 50% fat 8.2 Blood Vessel Artery - Coronary 0001621 93 442 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992576 245970 0.979711 0.994134 0.865693 20543 1 76 0.00193634 206 0 7.85849e+07 0.0199443 270889 7.90486e+07 9.01807e+06 20552 3.915e+07 0 0.114018 0.994134 0.860615 7.85849e+07 0.0027684 1.72088e+07 6.1676e+06 1.73218e+07 206 1.72647e+07 1.67446e+07 0.00235171 1.73844e+07 50.1728 0.00342687 0.995692 0 50.1636 GTEX-11TT1-1626-SM-5EQL7 1 B1 2 pieces, congestion, numerous hemosiderin-laden macrophages, atelectasis 8.9 Lung Lung 0008952 96 439 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991852 246391 0.978826 0.993533 0.825397 23073 1 76 0.00218898 206 0 7.93338e+07 0.0207876 451398 7.98501e+07 1.02441e+07 23095 3.9517e+07 0 0.153429 0.993533 0.82006 7.93338e+07 0.0029835 1.77501e+07 7.45274e+06 1.78075e+07 206 1.78129e+07 1.58373e+07 0.00258557 1.78745e+07 50.0863 0.00565306 0.995214 0 50.0808 GTEX-11TT1-1726-SM-5EQLJ 1 B1 2 pieces 9.1 Liver Liver 0001114 98 437 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992038 200661 0.983592 0.994016 0.869485 19941 1 76 0.00195249 133 0 6.24221e+07 0.0161044 777996 6.27979e+07 8.48243e+06 19948 3.10934e+07 0 0.114107 0.994016 0.864282 6.24221e+07 0.00284953 1.40528e+07 7.75618e+06 1.40383e+07 142 1.40654e+07 1.41993e+07 0.00240012 1.41441e+07 50.1396 0.0123889 0.995993 0 49.9741 GTEX-11TT1-1826-SM-5EQLV 0 B1 6 pieces, several include attached and internal fat up to 20%, numerous hair follicles, sweat and sebaceous glands 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 100 435 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989138 277049 0.969947 0.991537 0.79894 23798 1 76 0.0024201 156 0 6.91937e+07 0.0298847 1.45466e+06 6.97843e+07 9.70513e+06 23821 3.44353e+07 0 0.171007 0.991537 0.792178 6.91937e+07 0.00359167 1.53132e+07 8.86556e+06 1.54587e+07 171 1.53655e+07 9.49832e+06 0.00300447 1.55654e+07 50.3231 0.0208451 0.993935 0 50.2364 GTEX-11TT1-1926-SM-5PNYN 0 B1 2 pieces, few larger vessels and incidental lymph node 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 101 434 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99318 197177 0.983532 0.993763 0.867051 22069 1 76 0.00309417 275 0 1.08253e+08 0.0162539 1.05146e+06 1.08932e+08 3.00128e+06 22082 5.39643e+07 0 0.116481 0.993763 0.861643 1.08253e+08 0.0034338 2.42263e+07 1.24373e+07 2.44466e+07 318 2.42866e+07 1.96708e+07 0.00326388 2.44443e+07 50.1618 0.00965246 0.994346 0 50.2263 GTEX-11TT1-2026-SM-5EQM8 1 B1 2 pieces, epithelium focally sloughing 8.2 Prostate Prostate 0002367 107 428 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990586 286420 0.968851 0.992921 0.766153 24699 1 76 0.00216922 162 0 7.67062e+07 0.0308714 428185 7.7253e+07 1.03173e+07 24734 3.81817e+07 0 0.202698 0.992921 0.760729 7.67062e+07 0.00307386 1.69061e+07 7.51378e+06 1.69824e+07 176 1.69948e+07 1.22745e+07 0.00262048 1.70668e+07 50.1058 0.00554263 0.995256 0 50.1125 GTEX-11TT1-2126-SM-5GU5Y 0 B1 3 pieces, gynecomastoid change and focal apocrine metaplasia 7.5 Breast Breast - Mammary Tissue 0008367 112 423 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988097 238489 0.979508 0.991607 0.871656 22141 1 76 0.0018641 147 0 6.24796e+07 0.0201896 294234 6.30084e+07 4.51809e+06 22151 3.10304e+07 0 0.107852 0.991607 0.86434 6.24796e+07 0.00291975 1.37497e+07 6.88567e+06 1.39251e+07 149 1.38872e+07 1.48522e+07 0.00239006 1.40079e+07 50.2165 0.00466976 0.995117 0 50.3169 GTEX-11TT1-2226-SM-5GU6B 1 B1 3 pieces, active spermatogenesis 7.8 Testis Testis 0000473 114 421 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989539 450984 0.941745 0.992142 0.745734 30723 1 76 0.00199808 125 0 6.12757e+07 0.0579356 665218 6.1761e+07 4.01942e+06 30764 3.04775e+07 0 0.196011 0.992142 0.739874 6.12757e+07 0.00274205 1.28967e+07 8.16389e+06 1.30211e+07 127 1.30627e+07 1.0695e+07 0.00236909 1.30028e+07 49.8851 0.0107708 0.994745 0 50.24 GTEX-11TT1-2326-SM-5GU6N 0 B1 2 pieces, skeletal muscle with attached portion of tendon 8.7 Muscle Muscle - Skeletal 0011907 132 403 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.992405 253051 0.98624 0.994448 0.893861 17463 1 76 0.00187391 139 0 5.4143e+07 0.0135182 688426 5.44453e+07 3.42138e+06 17465 2.69571e+07 0 0.0923787 0.994448 0.888899 5.4143e+07 0.00274054 1.18377e+07 6.89096e+06 1.191e+07 139 1.18709e+07 1.13203e+07 0.00230634 1.19794e+07 50.2274 0.0126444 0.99649 0 50.1523 GTEX-11TT1-2426-SM-5EQMK 0 B1 2 pieces, small component of fibrous tissue/vessels 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 133 402 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990657 190949 0.982718 0.992927 0.833321 20289 1 76 0.00218532 140 0 6.05673e+07 0.0170326 597529 6.09988e+07 8.11262e+06 20301 3.01505e+07 0 0.149397 0.992927 0.827427 6.05673e+07 0.00321874 1.36443e+07 6.05385e+06 1.36607e+07 145 1.36531e+07 1.12771e+07 0.00270084 1.3784e+07 50.2385 0.00979575 0.995196 0 50.03 GTEX-11TT1-2526-SM-5EGIB 0 B1 6 pieces, attached and internal adipose tissue up to ~20%, squamous epithelium measured 45 to 54 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 135 400 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983896 212846 0.974765 0.989006 0.774532 23405 1 76 0.00258897 156 0 6.8914e+07 0.0249945 810275 6.968e+07 1.0628e+07 23427 3.41934e+07 0 0.200233 0.989006 0.766017 6.8914e+07 0.0056341 1.53072e+07 8.90264e+06 1.53803e+07 149 1.54648e+07 1.15622e+07 0.00410367 1.55596e+07 50.1528 0.0116285 0.994117 0 50.1191 GTEX-11TT1-2626-SM-5EGL2 0 B1 3 pieces, two include peripheral rim of adipose tissue (10-20%) 7.5 Nerve Nerve - Tibial 0001323 138 397 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988623 241589 0.975705 0.992011 0.803868 23110 1 76 0.00190339 213 0 8.26679e+07 0.0240336 459273 8.33336e+07 7.39402e+06 23138 4.10925e+07 0 0.171838 0.992011 0.797446 8.26679e+07 0.00295284 1.81994e+07 7.59142e+06 1.83794e+07 214 1.83817e+07 1.46946e+07 0.00242632 1.84627e+07 50.11 0.00551126 0.9954 0 50.246 GTEX-11TT1-2726-SM-5LU8L 1 B1 2 pieces 8.8 Blood Vessel Artery - Tibial 0007610 139 396 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99255 224244 0.980925 0.994358 0.887833 19975 1 76 0.00426404 143 0 7.43613e+07 0.0186716 359552 7.47832e+07 6.1381e+06 19981 3.69925e+07 0 0.0930918 0.994358 0.882824 7.43613e+07 0.00351082 1.61529e+07 5.6456e+06 1.62607e+07 163 1.62355e+07 1.71195e+07 0.00388812 1.63133e+07 50.1196 0.00480792 0.996165 0 50.1662 GTEX-11TTK-0002-SM-58Q8B C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TTK-0002-SM-5DWT4 C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11TTK-0002-SM-6WBTX C1 Blood Whole Blood 0013756 715 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11TTK-0005-SM-5O9BX C1 6.9 Blood Whole Blood 0013756 715 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.942579 561418 0.982147 0.945197 0.806499 17030 1 76 0.00357688 143 0 1.33308e+08 0.0162683 220407 1.41037e+08 6.15276e+06 17031 6.62148e+07 0 0.175648 0.945197 0.762301 1.33308e+08 0.00503947 3.15412e+07 2.60345e+08 3.24061e+07 187 3.24228e+07 3.91298e+07 0.00430615 3.1905e+07 49.5975 0.00156276 0.947815 0 50.6763 GTEX-11TTK-0008-SM-5S2RU C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1123 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994155 378807 0.973545 0.994915 0.872804 19407 1 76 0.00139841 149 0 6.65777e+07 0.0261909 351700 6.6918e+07 3.49e+06 19417 3.31743e+07 0 0.100741 0.994915 0.868366 6.65777e+07 0.00208719 1.47475e+07 1.26223e+07 1.48596e+07 158 1.47721e+07 1.5709e+07 0.00174254 1.48996e+07 50.2148 0.00525569 0.995675 0 50.1894 GTEX-11TTK-0011-R10b-SM-DO925 C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994639 590960 0.964428 0.995516 0.844257 23051 1 76 0.00180028 283 0 8.3521e+07 0.0352125 5.15848e+06 8.38972e+07 4.95792e+06 23071 4.16161e+07 0 0.120172 0.995516 0.840471 8.3521e+07 0.00228671 1.83875e+07 1.24633e+07 1.87751e+07 319 1.8582e+07 1.09859e+07 0.00204328 1.86478e+07 50.0883 0.0614857 0.996392 0 50.5215 GTEX-11TTK-0011-R11b-SM-DO112 C1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986348 781907 0.944913 0.990275 0.732654 24746 1 76 0.00264996 272 0 1.09869e+08 0.0545999 2.02301e+06 1.10948e+08 1.17402e+07 24783 5.45341e+07 0 0.212259 0.990275 0.725529 1.09869e+08 0.00444526 2.36367e+07 1.8974e+07 2.38057e+07 284 2.39795e+07 1.38667e+07 0.00354405 2.38494e+07 49.864 0.0182339 0.994202 0 50.1782 GTEX-11TTK-0011-R4a-SM-DNZZU C1, A1 6.9 Brain Brain - Amygdala 0001876 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988432 521593 0.967585 0.992451 0.864146 23012 1 76 0.00208459 269 0 8.34296e+07 0.032131 7.64459e+06 8.40642e+07 8.78650e+06 23033 4.14573e+07 0 0.103439 0.992451 0.857623 8.34296e+07 0.00408478 1.82901e+07 1.95361e+07 1.88323e+07 312 1.878e+07 9.38088e+06 0.00308063 1.86286e+07 49.7978 0.0909375 0.996471 0 50.7302 GTEX-11TTK-0011-R5a-SM-DNZZV C1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987692 831820 0.963154 0.991873 0.851228 23869 1 76 0.00209961 371 0 1.0497e+08 0.036588 8.73084e+06 1.0583e+08 1.05496e+07 23888 5.21396e+07 0 0.111925 0.991873 0.84431 1.0497e+08 0.00433024 2.28981e+07 2.80426e+07 2.35043e+07 340 2.35538e+07 1.11038e+07 0.00321022 2.32305e+07 49.6544 0.0824985 0.996053 0 50.6531 GTEX-11TTK-0011-R6b-SM-DNZZW C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 720 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987246 745316 0.963153 0.991611 0.851391 23334 1 76 0.00209637 272 0 9.47266e+07 0.0365746 7.95716e+06 9.55279e+07 9.97092e+06 23348 4.70427e+07 0 0.111761 0.991611 0.844249 9.47266e+07 0.00422817 2.05755e+07 2.67959e+07 2.1257e+07 327 2.12061e+07 1.03828e+07 0.00315758 2.09769e+07 49.7283 0.0832967 0.995976 0 50.8146 GTEX-11TTK-0011-R7b-SM-DNZZZ C1, A1 9.3 Brain Brain - Putamen (basal ganglia) 0001874 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987444 809520 0.959398 0.991667 0.836539 24712 1 76 0.00205923 270 0 1.0666e+08 0.0402887 6.75492e+06 1.07556e+08 9.92117e+06 24739 5.29747e+07 0 0.12286 0.991667 0.829567 1.0666e+08 0.00453504 2.32764e+07 2.32412e+07 2.35346e+07 327 2.35809e+07 1.22172e+07 0.00329186 2.36267e+07 50.0485 0.0628036 0.995889 0 50.2758 GTEX-11TTK-0011-R8b-SM-DO111 C1, A1 7.8 Brain Brain - Hypothalamus 0001898 720 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987537 647708 0.966376 0.991737 0.847183 23216 1 76 0.00216414 275 0 9.06861e+07 0.033363 5.88987e+06 9.14417e+07 9.75011e+06 23241 4.5041e+07 0 0.119192 0.991737 0.840183 9.06861e+07 0.00427198 1.99699e+07 1.70199e+07 2.04507e+07 330 2.05207e+07 1.0624e+07 0.0032136 2.02373e+07 49.6523 0.0644113 0.995937 0 50.5948 GTEX-11TTK-0126-SM-5987B 1 C1 6 pieces; sweat glands moderately autolyzed 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1122 784 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.984731 221008 0.9757 0.988892 0.7678 23705 1 76 0.00269046 148 0 6.96098e+07 0.0240403 443551 7.03917e+07 1.45449e+07 23736 3.45799e+07 0 0.207899 0.988892 0.759272 6.96098e+07 0.00613741 1.54494e+07 8.17759e+06 1.54752e+07 150 1.5555e+07 1.1216e+07 0.00440668 1.56439e+07 50.1426 0.00630119 0.993054 0 50.0418 GTEX-11TTK-0226-SM-5N9EC 1 C1 2 pieces 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1125 781 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986479 409763 0.975791 0.987926 0.773663 23947 1 76 0.00409668 281 0 1.04707e+08 0.0238834 530829 1.05986e+08 5.3289e+06 23990 5.19698e+07 0 0.202128 0.987926 0.764321 1.04707e+08 0.00428268 2.31803e+07 1.09149e+07 2.32793e+07 267 2.32323e+07 1.71885e+07 0.00418954 2.33783e+07 50.1566 0.00500846 0.989373 0 50.1065 GTEX-11TTK-0326-SM-5BC5N 1 C1 2 pieces; 1 with 25% fibroadipose tissue; 1 with 10% fat; scattered atrophic fibers 7.1 Muscle Muscle - Skeletal 0011907 1126 781 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985486 338751 0.973713 0.991001 0.817706 20815 1 76 0.00242538 126 0 6.18143e+07 0.0260406 567856 6.23757e+07 1.63209e+07 20828 3.06632e+07 0 0.156008 0.991001 0.810347 6.18143e+07 0.00528482 1.32696e+07 6.65665e+06 1.33339e+07 141 1.34245e+07 1.17202e+07 0.00384714 1.3495e+07 50.131 0.0091038 0.996516 0 50.1209 GTEX-11TTK-0426-SM-5EQLT 1 C1 2 pieces; 40 & 20% internal fat 6.9 Nerve Nerve - Tibial 0001323 1128 779 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989599 281774 0.966644 0.991654 0.714689 23580 1 76 0.00225336 164 0 7.06783e+07 0.0330733 253212 7.12731e+07 8.45335e+06 23614 3.51531e+07 0 0.251955 0.991654 0.708725 7.06783e+07 0.00343286 1.55576e+07 6.71312e+06 1.56464e+07 155 1.563e+07 1.02758e+07 0.00284189 1.5716e+07 50.1372 0.0035527 0.993709 0 50.1424 GTEX-11TTK-0826-SM-5N9EG 2 C1 2 pieces 5.7 Thyroid Thyroid 0002046 1133 776 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984881 375886 0.969819 0.986374 0.809101 24978 1 76 0.00400407 377 0 1.13296e+08 0.0298654 799921 1.14861e+08 6.41961e+06 25010 5.62369e+07 0 0.160718 0.986374 0.798076 1.13296e+08 0.00417686 2.49537e+07 1.2855e+07 2.50851e+07 337 2.50333e+07 2.01544e+07 0.00409034 2.51805e+07 50.1466 0.00696424 0.987866 0 50.1313 GTEX-11TTK-1926-SM-5PNW8 2 C1 2 pieces; extensive vascular, parenchymal and glomerular sclerosis [c/w renal failure] 6.2 Kidney Kidney - Cortex 0001225 1154 763 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988929 178809 0.976182 0.991052 0.802731 23654 1 76 0.00205925 164 0 7.94909e+07 0.0234537 1.40937e+06 8.02086e+07 7.94089e+06 23678 3.95197e+07 0 0.173451 0.991052 0.795549 7.94909e+07 0.00316526 1.74905e+07 8.98381e+06 1.76881e+07 182 1.76278e+07 1.51168e+07 0.00261107 1.77277e+07 50.1413 0.0175713 0.993176 0 50.2809 GTEX-11TTK-2426-SM-5PNYO 3 C1 6 pieces; mucosa too autolyzed for GTEx, but muscularis is acceptable 5.8 Colon Colon - Transverse 0001157 1163 757 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988902 254686 0.973589 0.989575 0.832401 23705 1 76 0.00311315 215 0 9.51765e+07 0.0260996 906290 9.61792e+07 2.95958e+06 23730 4.73336e+07 0 0.141188 0.989575 0.823723 9.51765e+07 0.00371775 2.06326e+07 8.56721e+06 2.07753e+07 240 2.06422e+07 1.74886e+07 0.00341524 2.08387e+07 50.2369 0.00942293 0.990248 0 50.1723 GTEX-11TTK-2726-SM-5GU58 1 C1 6 pieces 5.9 Vagina Vagina 0000996 1170 767 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987657 235682 0.965655 0.990216 0.693495 23125 1 76 0.00219418 126 0 5.91477e+07 0.0341666 494057 5.97321e+07 3.80786e+06 23152 2.93843e+07 0 0.27216 0.990216 0.68671 5.91477e+07 0.00318883 1.30856e+07 7.18248e+06 1.32068e+07 132 1.31744e+07 8.05089e+06 0.00269022 1.32667e+07 50.1745 0.00827122 0.992775 0 50.2305 GTEX-11TTK-2826-SM-5GU5K 1 C1 4 pieces 6.2 Brain Brain - Cerebellum 0002037 1186 751 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988685 617528 0.934308 0.991724 0.719294 23667 1 76 0.00208712 154 0 7.27655e+07 0.0653537 1.56516e+06 7.33727e+07 5.12934e+06 23692 3.6163e+07 0 0.215014 0.991724 0.713341 7.27655e+07 0.00301883 1.54908e+07 2.51907e+07 1.57248e+07 180 1.57272e+07 7.93377e+06 0.00255155 1.56992e+07 49.9555 0.0213316 0.994764 0 50.3749 GTEX-11TTK-2926-SM-5PNYP 1 C1 4 pieces 6.1 Brain Brain - Cortex 0001870 1189 749 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.983842 747022 0.959169 0.984986 0.840014 23178 1 76 0.00312585 369 0 9.61341e+07 0.0405553 7.86756e+06 9.75994e+07 3.19938e+06 23191 4.77898e+07 0 0.119155 0.984986 0.827402 9.61341e+07 0.00365518 2.09303e+07 3.26674e+07 2.15011e+07 359 2.11854e+07 9.25524e+06 0.00339021 2.13369e+07 50.1781 0.0806107 0.98613 0 50.6727 GTEX-11TUW-0004-SM-58Q8F B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11TUW-0004-SM-5DWT8 B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11TUW-0004-SM-6WBU1 B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-11TUW-0004-SM-7FG6E B1 Blood Whole Blood 0013756 650 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11TUW-0006-SM-5LZW2 B1 9.2 Blood Whole Blood 0013756 650 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.9904 630207 0.965767 0.992045 0.755603 19881 1 76 0.0030265 124 0 7.11426e+07 0.0337402 165935 7.17131e+07 3.52669e+06 19900 3.53857e+07 0 0.210164 0.992045 0.749592 7.11426e+07 0.00386138 1.57086e+07 2.5847e+07 1.58534e+07 140 1.59017e+07 1.31701e+07 0.00344325 1.57836e+07 49.8137 0.00231387 0.99369 0 50.2294 GTEX-11TUW-0008-SM-5SI6S B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 824 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989703 433544 0.97342 0.993249 0.857292 21669 1 76 0.00169604 281 0 9.47677e+07 0.0262926 510466 9.54118e+07 9.73851e+06 21689 4.71266e+07 0 0.116128 0.993249 0.851504 9.47677e+07 0.00294047 2.09552e+07 1.48546e+07 2.11317e+07 263 2.1198e+07 2.25747e+07 0.00231604 2.12212e+07 50.0274 0.00535014 0.996795 0 50.2097 GTEX-11TUW-0011-R10a-SM-DO924 B1, A1 5.6 Brain Brain - Frontal Cortex (BA9) 0009834 655 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99515 347576 0.970704 0.995916 0.84582 23303 1 76 0.00185785 270 0 8.21405e+07 0.0290507 1.01643e+07 8.24773e+07 4.96517e+06 23329 4.09531e+07 0 0.124884 0.995916 0.842366 8.21405e+07 0.00224862 1.81949e+07 1.19621e+07 1.85839e+07 321 1.8426e+07 9.21703e+06 0.00205308 1.84048e+07 49.9712 0.123238 0.996682 0 50.5288 GTEX-11TUW-0011-R11b-SM-DNZZX B1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 655 BP-43065 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 EXCLUDE 0.986133 650924 0.948484 0.990521 0.799005 26106 1 76 0.00240712 373 0 1.11123e+08 0.0513333 9.65562e+06 1.12186e+08 1.12555e+07 26138 5.5179e+07 0 0.149479 0.990521 0.791432 1.11123e+08 0.00463227 2.37827e+07 2.91446e+07 2.44928e+07 334 2.45052e+07 8.88489e+06 0.00351477 2.41706e+07 49.6562 0.0860676 0.994909 0 50.7354 GTEX-11TUW-0011-R1a-SM-DO92S B1, A1 5.8 Brain Brain - Hippocampus 0001954 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99343 628940 0.97152 0.994578 0.837961 22823 1 76 0.00188814 371 0 8.978e+07 0.0282911 1.18287e+07 9.02695e+07 5.58887e+06 22843 4.47139e+07 0 0.133559 0.994578 0.833417 8.978e+07 0.00233071 1.95954e+07 2.06471e+07 2.03404e+07 379 2.0053e+07 7.92556e+06 0.00210917 1.99664e+07 49.8918 0.131038 0.995726 0 50.9328 GTEX-11TUW-0011-R2b-SM-DO92T B1, A1 6.4 Brain Brain - Substantia nigra 0002038 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995376 333833 0.970971 0.996071 0.863555 22718 1 76 0.00179148 274 0 7.45016e+07 0.0287793 1.00215e+07 7.47955e+07 4.54177e+06 22730 3.71478e+07 0 0.107417 0.996071 0.860162 7.45016e+07 0.0022891 1.65449e+07 1.14777e+07 1.689e+07 291 1.67418e+07 8.77512e+06 0.00204012 1.67408e+07 49.9985 0.133986 0.996766 0 50.516 GTEX-11TUW-0011-R3a-SM-DO92U B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 655 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 EXCLUDE 0.995781 221493 0.975464 0.996515 0.882489 21171 1 76 0.00170449 193 0 6.34428e+07 0.0243101 1.02513e+07 6.36647e+07 3.57312e+06 21180 3.16455e+07 0 0.0929749 0.996515 0.879413 6.34428e+07 0.00213229 1.41577e+07 1.00486e+07 1.4518e+07 254 1.43409e+07 5.56442e+06 0.00191823 1.43674e+07 50.0461 0.161021 0.997248 0 50.6283 GTEX-11TUW-0011-R5b-SM-5BC6Q B1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 655 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.986364 398121 0.974185 0.991152 0.852898 21386 1 76 0.00262316 368 0 7.64058e+07 0.0256616 9.40269e+06 7.70879e+07 1.96115e+07 21395 3.79332e+07 0 0.121287 0.991152 0.845351 7.64058e+07 0.00522052 1.68723e+07 3.28581e+07 1.659e+07 331 1.64333e+07 5.21863e+06 0.00391557 1.73105e+07 51.2998 0.121974 0.99594 0 49.5781 GTEX-11TUW-0226-SM-5LU8X 1 B1 2 pieces, some nodularity/fibrosis, single collection of lymphocytes 6.5 Thyroid Thyroid 0002046 722 973 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989758 346673 0.964636 0.991837 0.712269 23407 1 76 0.00457759 124 0 6.66103e+07 0.0351282 204942 6.71585e+07 5.44870e+06 23436 3.30994e+07 0 0.252367 0.991837 0.706455 6.66103e+07 0.00393954 1.45531e+07 6.79378e+06 1.46006e+07 138 1.46173e+07 9.14643e+06 0.00425923 1.46714e+07 50.0924 0.00305162 0.993917 0 50.0816 GTEX-11TUW-0526-SM-5LU9A 1 B1 2 pieces, intrapulmonary lymph node, includes several large vessels and focus of cartilage, some hemosiderin-laden macrophages 7.7 Lung Lung 0008952 727 968 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990118 298222 0.971571 0.992129 0.733247 23412 1 76 0.00483399 124 0 6.48262e+07 0.0278798 203066 6.53405e+07 5.49964e+06 23445 3.22078e+07 0 0.238324 0.992129 0.727475 6.48262e+07 0.00420826 1.42992e+07 6.04738e+06 1.43767e+07 131 1.43871e+07 9.97481e+06 0.00452176 1.44149e+07 50.0483 0.00310781 0.994139 0 50.135 GTEX-11TUW-0626-SM-5LU9M 1 B1 6 pieces, 2 with ~20% attached fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 729 966 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989057 412570 0.965227 0.991171 0.743486 22518 1 76 0.00461523 136 0 5.90601e+07 0.0345692 283753 5.95861e+07 4.9718e+06 22540 2.93475e+07 0 0.221741 0.991171 0.736922 5.90601e+07 0.00397324 1.2967e+07 9.75363e+06 1.30173e+07 131 1.3021e+07 8.75027e+06 0.00429492 1.30907e+07 50.1335 0.00476206 0.993286 0 50.0969 GTEX-11TUW-0926-SM-5EQMW 1 B1 6 pieces 6.7 Blood Vessel Artery - Aorta 0001496 737 958 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989917 228559 0.970713 0.992033 0.767145 21793 1 76 0.00221454 131 0 6.79044e+07 0.028902 123910 6.84498e+07 9.12563e+06 21824 3.37708e+07 0 0.203568 0.992033 0.761033 6.79044e+07 0.00319578 1.48207e+07 6.52665e+06 1.48776e+07 145 1.4887e+07 1.20731e+07 0.00270411 1.49509e+07 50.1071 0.00181023 0.994149 0 50.0959 GTEX-11TUW-1026-SM-5GU7D 1 B1 2 pieces, interstitial and patchy fibrosis 6.4 Heart Heart - Left Ventricle 0006566 739 956 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.989358 399017 0.980206 0.992821 0.839988 22031 1 76 0.00204837 266 0 8.32847e+07 0.0196426 3.65801e+06 8.38869e+07 5.25336e+06 22048 4.13832e+07 0 0.140218 0.992821 0.833958 8.32847e+07 0.00317473 1.85688e+07 1.19213e+07 1.84788e+07 275 1.84386e+07 1.065e+07 0.00260958 1.88743e+07 50.5838 0.0436064 0.996285 0 49.8785 GTEX-11TUW-1126-SM-5EQKJ 1 B1 2 pieces, both ~40% fat, myocyte hypertrophy 6.8 Heart Heart - Atrial Appendage 0006631 742 953 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991409 208641 0.979134 0.993668 0.818426 21775 1 76 0.00194542 267 0 7.54158e+07 0.0207127 2.38862e+06 7.58963e+07 9.96544e+06 21794 3.75502e+07 0 0.160709 0.993668 0.813243 7.54158e+07 0.00300938 1.66661e+07 1.54962e+07 1.64228e+07 256 1.63989e+07 9.25812e+06 0.00247619 1.68471e+07 50.6741 0.0314721 0.995926 0 49.6323 GTEX-11TUW-1226-SM-5GU7C 1 B1 6 pieces, well trimmed 6.2 Esophagus Esophagus - Muscularis 0004648 744 951 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989808 195292 0.967738 0.99231 0.780224 22099 1 76 0.00201512 130 0 6.08042e+07 0.0320796 806577 6.12754e+07 4.03215e+06 22122 3.02244e+07 0 0.187514 0.99231 0.774223 6.08042e+07 0.0029113 1.31972e+07 6.07172e+06 1.32668e+07 162 1.32117e+07 6.89033e+06 0.00246208 1.33961e+07 50.3466 0.0131631 0.994811 0 50.1316 GTEX-11TUW-1326-SM-5EQKV 1 B1 6 pieces, few clusters of submucosal glands 7.3 Esophagus Esophagus - Mucosa 0006920 745 950 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990495 274255 0.972407 0.992865 0.793536 22827 1 76 0.00212791 160 0 7.29777e+07 0.0273744 455159 7.35021e+07 9.95197e+06 22849 3.63208e+07 0 0.178871 0.992865 0.787875 7.29777e+07 0.00315231 1.62533e+07 8.92748e+06 1.63318e+07 179 1.63343e+07 1.15966e+07 0.00263889 1.64168e+07 50.1259 0.00619246 0.995236 0 50.1206 GTEX-11TUW-1726-SM-5BC5C 2 B1 2 pieces, severe micro and macrovesicular steatosis 6.1 Liver Liver 0001114 755 940 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988223 311909 0.982101 0.99177 0.838421 19682 1 76 0.00257376 155 0 6.93334e+07 0.01773 564970 6.99087e+07 1.68031e+07 19697 3.44554e+07 0 0.143679 0.99177 0.831521 6.93334e+07 0.00485555 1.54665e+07 1.10316e+07 1.54648e+07 182 1.55194e+07 1.04795e+07 0.00371058 1.56366e+07 50.188 0.00808154 0.995316 0 49.9972 GTEX-11TUW-1826-SM-5BC5D 1 B1 2 pieces, predominantly fat, ~5-10% fibrous, no ductal/lobular elements noted 7.6 Breast Breast - Mammary Tissue 0008367 764 931 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986055 292143 0.973722 0.990856 0.809961 21984 1 76 0.00265264 142 0 6.76071e+07 0.0260078 373120 6.8231e+07 1.88996e+07 21997 3.35613e+07 0 0.163762 0.990856 0.802554 6.76071e+07 0.00493807 1.48228e+07 7.62319e+06 1.49077e+07 157 1.50008e+07 1.13364e+07 0.00378982 1.50343e+07 50.0558 0.00546848 0.995656 0 50.1427 GTEX-11TUW-1926-SM-5BC58 3 B1 7 pieces, severely autolyzed mucosa with good lymphoid component, includes some muscularis (not target) 6 Small Intestine Small Intestine - Terminal Ileum 0001211 770 925 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984973 265372 0.955625 0.989094 0.660028 23981 1 76 0.00305493 119 0 6.07206e+07 0.0439969 150261 6.13902e+07 1.48911e+07 24023 3.0118e+07 0 0.295597 0.989094 0.65283 6.07206e+07 0.00546409 1.30774e+07 7.86516e+06 1.32474e+07 123 1.33023e+07 8.10202e+06 0.00425449 1.32641e+07 49.9282 0.00244764 0.993215 0 50.3229 GTEX-11TUW-2026-SM-5EQL8 3 B1 8 pieces, muscularis and severely autolyzed mucosa 6.7 Colon Colon - Transverse 0001157 778 917 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988999 295079 0.967186 0.991782 0.752819 22706 1 76 0.00214564 134 0 7.11294e+07 0.0326178 448329 7.17188e+07 8.43408e+06 22737 3.53672e+07 0 0.214367 0.991782 0.746632 7.11294e+07 0.00337231 1.54192e+07 6.66044e+06 1.54732e+07 164 1.5465e+07 9.99731e+06 0.00275725 1.56171e+07 50.2446 0.0062512 0.994563 0 50.0875 GTEX-11TUW-2126-SM-5GU7B 2 B1 2 pieces, epithelium sloughing 5.8 Prostate Prostate 0002367 781 914 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989669 246011 0.965148 0.992248 0.752237 23338 1 76 0.00207211 126 0 5.67137e+07 0.0345552 292804 5.71567e+07 3.91409e+06 23361 2.81894e+07 0 0.212911 0.992248 0.746406 5.67137e+07 0.00305887 1.24794e+07 6.17817e+06 1.25822e+07 139 1.25542e+07 7.95124e+06 0.00256421 1.26475e+07 50.1851 0.00512283 0.994828 0 50.2052 GTEX-11TUW-2226-SM-5EQL9 2 B1 2 pieces, spermatogenesis is present, peritubular fibrosis and some hyalinization of tubules 6.4 Testis Testis 0000473 783 912 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989935 265799 0.929802 0.992076 0.720435 31968 1 76 0.0021123 149 0 7.25970e+07 0.0699062 674977 7.31769e+07 1.02712e+07 32021 3.61434e+07 0 0.209367 0.992076 0.714727 7.25970e+07 0.00292431 1.51286e+07 1.24041e+07 1.51227e+07 157 1.51589e+07 1.0569e+07 0.00251743 1.52354e+07 50.1258 0.00922391 0.994218 0 49.9902 GTEX-11TUW-2326-SM-5EQMO 2 B1 6 pieces, predominantly muscularis (target) with few strips of markedly autolyzed mucosa (not target) 5.9 Colon Colon - Sigmoid 0001159 787 908 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991127 536132 0.95155 0.993204 0.778378 22482 1 76 0.00202865 162 0 7.36655e+07 0.0482618 797084 7.41695e+07 8.4481e+06 22507 3.66389e+07 0 0.173172 0.993204 0.773088 7.36655e+07 0.0032868 1.56547e+07 2.12738e+07 1.57578e+07 188 1.56714e+07 1.00508e+07 0.00265641 1.59e+07 50.3621 0.0107468 0.995281 0 50.1642 GTEX-11TUW-2426-SM-5EQKB 1 B1 2 pieces, salivary gland represents ~20% of the tissue, remainder is skeletal muscle, stroma, fat, nerve and small focus of lip/squamous epithelium 8.1 Salivary Gland Minor Salivary Gland 0006330 794 901 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.983677 261226 0.974575 0.985979 0.789011 23947 1 76 0.00276059 314 0 9.39343e+07 0.0230712 204710 9.52701e+07 1.30136e+07 23979 4.66399e+07 0 0.185564 0.985979 0.777948 9.39343e+07 0.00397054 2.14544e+07 3.26554e+07 2.14001e+07 295 2.14465e+07 1.53343e+07 0.00336415 2.16179e+07 50.1989 0.00214873 0.988281 0 49.9367 GTEX-11TUW-2526-SM-5EQKN 1 B1 2 pieces, ~5% of one piece is fibrous tissue 8.5 Muscle Muscle - Skeletal 0011907 819 876 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991816 181893 0.982449 0.993823 0.873625 19538 1 76 0.001783 201 0 7.96876e+07 0.01731 767035 8.01829e+07 1.10899e+07 19542 3.96959e+07 0 0.108824 0.993823 0.868228 7.96876e+07 0.00274052 1.73857e+07 1.19375e+07 1.72306e+07 242 1.72465e+07 1.59514e+07 0.0022608 1.75175e+07 50.3898 0.00956606 0.995829 0 49.776 GTEX-11TUW-2626-SM-5EQKZ 0 B1 2 pieces, one piece is ~20% tendon/fibrous tissue 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 822 873 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991709 189367 0.975035 0.993507 0.814368 22447 1 76 0.00202885 208 0 7.77909e+07 0.0246437 369219 7.82993e+07 1.0148e+07 22475 3.87414e+07 0 0.160667 0.993507 0.80908 7.77909e+07 0.00297443 1.71799e+07 7.16676e+06 1.72513e+07 206 1.72351e+07 1.35197e+07 0.00250079 1.7333e+07 50.1416 0.00471548 0.995304 0 50.1036 GTEX-11TUW-2726-SM-5EQLC 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium measures 40-50 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 824 871 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.992373 191217 0.974137 0.994218 0.80565 23544 1 76 0.00210855 182 0 7.83388e+07 0.0255753 458018 7.87944e+07 1.02481e+07 23565 3.9013e+07 0 0.168486 0.994218 0.800992 7.83388e+07 0.00309066 1.72718e+07 8.46266e+06 1.73385e+07 195 1.73402e+07 1.40447e+07 0.0025987 1.74059e+07 50.0945 0.00581283 0.996063 0 50.0964 GTEX-11TUW-2726-SM-E9J4M 1 B1 6 pieces, include 5-10% attached and internal adipose tissue, squamous epithelium measures 40-50 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 824 871 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985093 414706 0.974562 0.986052 0.816461 23041 1 76 0.00183478 208 0 7.96125e+07 0.0251542 529755 8.07387e+07 4.16901e+06 23062 3.96511e+07 0 0.158102 0.986052 0.805073 7.96125e+07 0.00275361 1.744e+07 7.4919e+06 1.75751e+07 200 1.75376e+07 1.44632e+07 0.00229375 1.7555e+07 50.0248 0.00656135 0.98701 0 50.1929 GTEX-11TUW-2926-SM-5BC59 1 B1 2 pieces, one piece demonstrates calcific atherosclerosis with narrowing of the lumen, second piece has focal medial calcification (Monckeberg's sclerosis) 6.6 Blood Vessel Artery - Tibial 0007610 827 868 BP-44512 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98792 288765 0.970168 0.991757 0.771408 22325 1 76 0.00267584 123 0 5.97945e+07 0.0295183 181190 6.02915e+07 1.4276e+07 22353 2.96936e+07 0 0.198761 0.991757 0.765049 5.97945e+07 0.00495722 1.29092e+07 5.90948e+06 1.30426e+07 133 1.30849e+07 9.85077e+06 0.00381212 1.30851e+07 50.0003 0.00300523 0.995594 0 50.257 GTEX-11TUW-3026-SM-5EGKM 1 B1 1 piece, adenohypophysis 7.1 Pituitary Pituitary 0000007 862 833 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989342 297052 0.963293 0.992251 0.759892 24519 1 76 0.00195307 159 0 7.54706e+07 0.0362546 229723 7.606e+07 6.57413e+06 24549 3.75239e+07 0 0.203401 0.992251 0.754004 7.54706e+07 0.0031054 1.63445e+07 8.63218e+06 1.64915e+07 181 1.65324e+07 1.13739e+07 0.00252754 1.65099e+07 49.9659 0.00302029 0.995161 0 50.2238 GTEX-11TUW-3126-SM-5GU4Y 0 B1 3 pieces , includes small detached fragment of cerebellum 5.8 Brain Brain - Cortex 0001870 863 832 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.989622 316825 0.968965 0.992269 0.836988 22093 1 76 0.00193722 161 0 6.24045e+07 0.0308161 6.66903e+06 6.28907e+07 3.69507e+06 22106 3.10273e+07 0 0.131977 0.992269 0.830518 6.24045e+07 0.00297751 1.38361e+07 1.19558e+07 1.39888e+07 198 1.38236e+07 6.4787e+06 0.00245598 1.41504e+07 50.584 0.106042 0.994916 0 50.2743 GTEX-11UD1-0001-SM-58Q8D B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11UD1-0001-SM-5DWT6 B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11UD1-0001-SM-6WBTY B1 Blood Whole Blood 0013756 1268 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11UD1-0008-SM-5S2P6 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1354 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994479 343705 0.970061 0.995501 0.864079 19594 1 76 0.00159409 137 0 6.15934e+07 0.0296798 217471 6.18717e+07 3.58641e+06 19604 3.07025e+07 0 0.105982 0.995501 0.860191 6.15934e+07 0.00226921 1.34974e+07 1.30936e+07 1.36679e+07 144 1.36158e+07 1.43818e+07 0.00193131 1.36228e+07 50.0129 0.00351487 0.996523 0 50.3138 GTEX-11UD1-0011-R1b-SM-5BC7D B1, A1 8.1 Brain Brain - Hippocampus 0001954 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986089 469114 0.957632 0.991087 0.831943 22064 1 76 0.00309981 141 0 5.40629e+07 0.0421135 3.87785e+06 5.45491e+07 1.42879e+07 22079 2.68177e+07 0 0.125689 0.991087 0.824528 5.40629e+07 0.00581592 1.18956e+07 1.2108e+07 1.18557e+07 153 1.17603e+07 5.47425e+06 0.00445102 1.22511e+07 51.0221 0.0710891 0.996085 0 49.9162 GTEX-11UD1-0011-R2b-SM-5BC6O B1, A1 8.1 Brain Brain - Substantia nigra 0002038 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985659 460018 0.958681 0.991071 0.829677 22405 1 76 0.00295713 148 0 6.01731e+07 0.0410026 3.96415e+06 6.07152e+07 1.50756e+07 22422 2.98422e+07 0 0.129004 0.991071 0.822269 6.01731e+07 0.00562691 1.31837e+07 1.1432e+07 1.32668e+07 162 1.32236e+07 7.21502e+06 0.00428473 1.35418e+07 50.5943 0.0652908 0.996483 0 50.1572 GTEX-11UD1-0011-R3a-SM-5BC6S B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985091 584161 0.964852 0.990577 0.853458 22186 1 76 0.00320704 184 0 6.98231e+07 0.0348505 7.14162e+06 7.04874e+07 1.76895e+07 22198 3.46103e+07 0 0.111394 0.990577 0.845415 6.98231e+07 0.00588177 1.53792e+07 2.10739e+07 1.5241e+07 214 1.5154e+07 6.35087e+06 0.00453699 1.58064e+07 51.0535 0.101318 0.996063 0 49.7744 GTEX-11UD1-0011-R5b-SM-5P9FP B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 1267 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987817 601060 0.968241 0.988075 0.819655 22657 1 76 0.00359178 375 0 1.2411e+08 0.0315896 1.28154e+07 1.25608e+08 4.22272e+06 22674 6.18328e+07 0 0.148586 0.988075 0.809881 1.2411e+08 0.00413925 2.59942e+07 6.7559e+07 2.72516e+07 363 2.65343e+07 9.31168e+06 0.00386545 2.67272e+07 50.1811 0.102027 0.988333 0 51.1808 GTEX-11UD1-0126-SM-5PNYG 1 B1 6 pieces, well trimmed, squamous epithelium measures ~40-45 microns 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1357 1116 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990221 200666 0.976014 0.990919 0.831624 24032 1 76 0.00351851 278 0 9.8781e+07 0.0237313 769555 9.96863e+07 3.16965e+06 24053 4.91695e+07 0 0.14439 0.990919 0.824072 9.8781e+07 0.00415596 2.17329e+07 1.03061e+07 2.2057e+07 262 2.19008e+07 1.68122e+07 0.00383701 2.19578e+07 50.065 0.00771977 0.991616 0 50.37 GTEX-11UD1-0226-SM-5EQKL 0 B1 2 pieces, one is ~5-10% fibrovascular tissue, atypical cells ? fat necrosis 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1354 1120 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991074 240837 0.974818 0.993174 0.77492 23929 1 76 0.00229583 166 0 7.95598e+07 0.024841 275268 8.01066e+07 1.01458e+07 23967 3.95992e+07 0 0.199898 0.993174 0.769631 7.95598e+07 0.00327537 1.74131e+07 8.00142e+06 1.75468e+07 182 1.75439e+07 1.37085e+07 0.00278457 1.75765e+07 50.0464 0.00343627 0.995275 0 50.1911 GTEX-11UD1-0326-SM-5EQKX 0 B1 2 pieces, ~10% internal fat, scattered atrophic fibers 6.3 Muscle Muscle - Skeletal 0011907 1364 1111 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990965 205239 0.970677 0.993507 0.801729 22534 1 76 0.00215368 132 0 7.58109e+07 0.0290588 526750 7.63063e+07 1.07759e+07 22557 3.77317e+07 0 0.168948 0.993507 0.796523 7.58109e+07 0.00317391 1.60269e+07 8.07219e+06 1.61302e+07 155 1.6104e+07 1.49648e+07 0.00266249 1.623e+07 50.1948 0.0069031 0.99605 0 50.1605 GTEX-11UD2-0001-SM-58Q8A B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11UD2-0001-SM-5DWT3 B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11UD2-0001-SM-6WBTW B1 Blood Whole Blood 0013756 829 BP-40136 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/25/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11UD2-0005-SM-5NQ9B B1 8.6 Blood Whole Blood 0013756 829 BP-40138 RNA isolation_PAXgene Blood RNA (Manual) 06/25/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.982115 268610 0.981745 0.983473 0.800747 18534 1 76 0.00234407 104 0 6.88495e+07 0.017573 132036 7.00064e+07 5.71466e+06 18542 3.42807e+07 0 0.180998 0.983473 0.787513 6.88495e+07 0.00342091 1.59751e+07 8.13331e+07 1.61787e+07 121 1.61601e+07 1.70674e+07 0.00288174 1.60949e+07 49.8989 0.00188606 0.984832 0 50.3166 GTEX-11UD2-0008-SM-5S2P7 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 845 BP-45530 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.993804 477453 0.970111 0.995106 0.867813 20134 1 76 0.00138014 207 0 8.11495e+07 0.0296643 441317 8.15486e+07 4.18523e+06 20142 4.04225e+07 0 0.102297 0.995106 0.863566 8.11495e+07 0.00213255 1.76932e+07 1.74366e+07 1.81033e+07 211 1.80109e+07 1.79335e+07 0.00175585 1.79105e+07 49.8603 0.0054117 0.996408 0 50.5728 GTEX-11UD2-0011-R9b-SM-DO926 B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 834 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994202 524472 0.960994 0.994955 0.831983 21854 1 76 0.00177377 220 0 7.35431e+07 0.038665 2.5071e+06 7.3916e+07 4.59382e+06 21870 3.6654e+07 0 0.129012 0.994955 0.827785 7.35431e+07 0.00235682 1.63429e+07 1.02154e+07 1.66231e+07 216 1.64184e+07 1.10269e+07 0.00206507 1.66073e+07 50.286 0.0339183 0.995709 0 50.425 GTEX-11UD2-0126-SM-5EQL2 0 B1 2 pieces, ~10% fibrovacular tissue, rep. dlineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 842 1342 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991948 272493 0.975329 0.994 0.771572 22831 1 76 0.00212192 166 0 7.71752e+07 0.0243551 352782 7.7641e+07 9.32808e+06 22858 3.84101e+07 0 0.203757 0.994 0.766943 7.71752e+07 0.00311733 1.6975e+07 7.02931e+06 1.70656e+07 180 1.70648e+07 1.27951e+07 0.00261859 1.71296e+07 50.0948 0.00454376 0.996052 0 50.1331 GTEX-11UD2-0226-SM-5EQKY 0 B1 6 pieces, squmous epithelium is ~60-70 microns, minimal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 845 1339 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990747 202118 0.97592 0.992941 0.791703 22879 1 76 0.00211074 204 0 7.82323e+07 0.0238258 502667 7.87885e+07 9.75448e+06 22910 3.8929e+07 0 0.184217 0.992941 0.786115 7.82323e+07 0.00335391 1.7093e+07 8.66654e+06 1.71698e+07 186 1.71606e+07 1.36617e+07 0.00273095 1.72714e+07 50.1609 0.00637996 0.995135 0 50.1121 GTEX-11UD2-0326-SM-5EQLE 0 B1 2 pieces, %-10% adherent/interstitial fat/ fasica 8.1 Muscle Muscle - Skeletal 0011907 849 1335 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990824 224161 0.984048 0.993451 0.850901 19748 1 76 0.00177382 199 0 8.05763e+07 0.0157464 833293 8.11075e+07 1.06134e+07 19759 4.01151e+07 0 0.133147 0.993451 0.845328 8.05763e+07 0.00274472 1.75783e+07 9.08697e+06 1.76355e+07 229 1.75874e+07 1.60236e+07 0.00225799 1.78256e+07 50.3363 0.0102739 0.996077 0 50.0813 GTEX-11UD2-0426-SM-5EQ5W 0 B1 2 pieces, discontinous rim of adherent fat up to ~1.5mm 7.2 Nerve Nerve - Tibial 0001323 852 1332 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988719 316524 0.969555 0.991836 0.757526 23436 1 76 0.00210261 152 0 7.04505e+07 0.0301597 190055 7.10304e+07 8.80661e+06 23468 3.49998e+07 0 0.212029 0.991836 0.751341 7.04505e+07 0.00328793 1.54039e+07 6.70362e+06 1.55222e+07 160 1.55322e+07 1.1463e+07 0.00269341 1.56068e+07 50.1198 0.00267569 0.994952 0 50.1912 GTEX-11UD2-0526-SM-5GU69 0 B1 2 pieces, clean specimens; ~0.5mm focal adherent fascia on one, delineated 7.7 Blood Vessel Artery - Tibial 0007610 856 1328 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.989171 503163 0.975562 0.992389 0.827936 22319 1 76 0.00231422 277 0 1.03482e+08 0.0240633 282269 1.04276e+08 5.79558e+06 22340 5.13912e+07 0 0.147626 0.992389 0.821635 1.03482e+08 0.00329462 2.22105e+07 7.65809e+06 2.24181e+07 280 2.24065e+07 1.97867e+07 0.00280283 2.25393e+07 50.1478 0.00270694 0.995607 0 50.2325 GTEX-11UD2-0626-SM-5GU6L 1 B1 2 pieces, no significant findings 6.2 Thyroid Thyroid 0002046 881 1303 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990807 182698 0.964435 0.992837 0.708773 22560 1 76 0.00203226 113 0 5.63829e+07 0.0353487 187591 5.67897e+07 3.54177e+06 22587 2.80621e+07 0 0.255662 0.992837 0.703696 5.63829e+07 0.00284445 1.23116e+07 5.87536e+06 1.2388e+07 123 1.23829e+07 7.93269e+06 0.00243753 1.24271e+07 50.0889 0.00330326 0.994867 0 50.1546 GTEX-11UD2-0726-SM-5EQ69 2 B1 2 pieces, moderate congestion 6.9 Lung Lung 0008952 889 1295 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989036 248837 0.970148 0.991755 0.699962 23749 1 76 0.00251994 120 0 6.54026e+07 0.0292077 227712 6.59464e+07 8.25048e+06 23786 3.24956e+07 0 0.270186 0.991755 0.694191 6.54026e+07 0.0035314 1.43521e+07 7.13196e+06 1.44661e+07 134 1.44836e+07 9.63372e+06 0.00302428 1.45032e+07 50.0339 0.00345299 0.994474 0 50.1978 GTEX-11UD2-0826-SM-5EQKS 1 B1 6 pieces, adherent serosa/fat up to ~1mm 6.5 Blood Vessel Artery - Aorta 0001496 894 1290 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988058 285149 0.9692 0.990796 0.788566 22573 1 76 0.00215949 203 0 8.53002e+07 0.0304841 225702 8.60926e+07 1.22267e+07 22597 4.24099e+07 0 0.180634 0.990796 0.781308 8.53002e+07 0.00331263 1.82959e+07 8.45466e+06 1.85113e+07 206 1.84901e+07 1.45582e+07 0.00273447 1.85468e+07 50.0765 0.00262162 0.993535 0 50.2926 GTEX-11UD2-0926-SM-5CVL6 1 B1 2 pieces, no abnormalities 6.1 Heart Heart - Atrial Appendage 0006631 897 1287 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986952 265100 0.981481 0.990542 0.831356 22381 1 76 0.00472655 265 0 8.67068e+07 0.0183536 5.9282e+06 8.75347e+07 1.61957e+07 22401 4.3053e+07 0 0.150125 0.990542 0.823493 8.67068e+07 0.00686804 1.908e+07 1.62264e+07 1.89871e+07 266 1.89952e+07 1.06076e+07 0.00579341 1.93234e+07 50.4283 0.067724 0.994132 0 49.878 GTEX-11UD2-1126-SM-5EQM6 1 B1 2 pieces, clean specimens; nubbin of adherent fat on one ~1.5mm 7.3 Blood Vessel Artery - Coronary 0001621 906 1278 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988583 296267 0.96896 0.991291 0.77873 22619 1 76 0.00220518 158 0 7.75612e+07 0.0307301 210640 7.82426e+07 1.00345e+07 22644 3.85561e+07 0 0.190229 0.991291 0.771948 7.75612e+07 0.00330418 1.66549e+07 6.41099e+06 1.67675e+07 174 1.67698e+07 1.34124e+07 0.00275318 1.68585e+07 50.1319 0.00269214 0.993998 0 50.1683 GTEX-11UD2-1226-SM-5EQMI 1 B1 6 pieces, all muscularis, good specimens 6.8 Esophagus Esophagus - Muscularis 0004648 927 1257 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98892 278113 0.965593 0.991454 0.763287 22720 1 76 0.00215414 150 0 7.04908e+07 0.0342259 1.12622e+06 7.10984e+07 9.03203e+06 22748 3.50453e+07 0 0.202306 0.991454 0.756764 7.04908e+07 0.00342043 1.52782e+07 7.98739e+06 1.52986e+07 177 1.52613e+07 8.65126e+06 0.00278567 1.54851e+07 50.3639 0.0158403 0.993988 0 50.0333 GTEX-11UD2-1526-SM-5EQLQ 1 B1 6 pieces, all muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 932 1252 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989466 209047 0.967135 0.991874 0.78667 21940 1 76 0.00210546 148 0 6.53267e+07 0.0327194 1.55346e+06 6.58619e+07 8.36932e+06 21958 3.24862e+07 0 0.180466 0.991874 0.780278 6.53267e+07 0.00342429 1.43087e+07 6.76693e+06 1.41994e+07 182 1.41392e+07 6.74053e+06 0.00276327 1.45205e+07 50.6652 0.0235867 0.994282 0 49.8084 GTEX-11UD2-1626-SM-5EQM3 1 B1 2 pieces, diffuse macrovesicular steatosis involves ~80% of parenchyma 5.8 Liver Liver 0001114 945 1239 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.988019 497381 0.964751 0.990095 0.801991 22234 1 76 0.00222029 198 0 7.14242e+07 0.0351033 4.3827e+06 7.21388e+07 8.69936e+06 22252 3.55366e+07 0 0.16276 0.990095 0.794048 7.14242e+07 0.00350708 1.58794e+07 1.94613e+07 1.57432e+07 219 1.56599e+07 7.09223e+06 0.00286234 1.61102e+07 50.7087 0.0607538 0.992171 0 49.7846 GTEX-11UD2-2526-SM-5CVNU 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~60-70 microns 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 986 1198 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.981488 232458 0.971692 0.985374 0.747335 23923 1 76 0.00489258 143 0 7.33746e+07 0.028109 388377 7.44636e+07 1.24581e+07 23955 3.63915e+07 0 0.224358 0.985374 0.736404 7.33746e+07 0.00694684 1.60788e+07 8.58649e+06 1.61728e+07 148 1.62099e+07 1.08664e+07 0.00591566 1.6319e+07 50.1677 0.00521566 0.989261 0 50.1456 GTEX-11UD2-2826-SM-5GU6X 2 B1 2 pieces, autolysis variable from mild--moderate/severe. Spermatogenesis present, but appears reduced 6.1 Testis Testis 0000473 1004 1180 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.987117 307044 0.94875 0.990663 0.730206 29338 1 76 0.00205268 132 0 6.69569e+07 0.0509944 892523 6.75879e+07 4.76718e+06 29384 3.32653e+07 0 0.218543 0.990663 0.723389 6.69569e+07 0.00299434 1.45074e+07 7.80121e+06 1.46352e+07 151 1.46689e+07 9.20949e+06 0.00252182 1.46942e+07 50.043 0.0132054 0.99421 0 50.2192 GTEX-11VI4-0001-SM-5S2OI B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -106 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992322 1.13412e+06 0.954862 0.994091 0.803096 20284 1 76 0.00178834 138 0 6.08758e+07 0.0448412 485747 6.12376e+07 4.15548e+06 20301 3.03012e+07 0 0.151766 0.994091 0.798351 6.08758e+07 0.00260412 1.32959e+07 1.16534e+07 1.34027e+07 134 1.33726e+07 1.31676e+07 0.00219551 1.34425e+07 50.1303 0.00793217 0.99586 0 50.2001 GTEX-11VI4-0003-SM-58Q81 B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11VI4-0003-SM-5DWTX B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11VI4-0003-SM-6WBUJ B1 Blood Whole Blood 0013756 -106 BP-40280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/28/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11VI4-0006-SM-5N9D8 B1 8.9 Blood Whole Blood 0013756 -106 BP-40286 RNA isolation_PAXgene Blood RNA (Manual) 06/28/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.98389 1.19831e+06 0.937239 0.98524 0.776193 19066 1 76 0.00301292 117 0 8.08226e+07 0.0622677 190350 8.20334e+07 3.9466e+06 19075 4.02395e+07 0 0.161046 0.98524 0.764736 8.08226e+07 0.00372778 1.76219e+07 9.16238e+07 1.79178e+07 139 1.79132e+07 1.79155e+07 0.00336986 1.77652e+07 49.7926 0.0023204 0.98659 0 50.4163 GTEX-11VI4-0126-SM-5GU6Z 1 B1 2 pieces; slight congestion 7.2 Spleen Spleen 0002106 102 1171 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987754 246089 0.965235 0.990886 0.787901 22871 1 76 0.00266427 117 0 5.37394e+07 0.0326837 326936 5.42337e+07 3.8242e+06 22888 2.66516e+07 0 0.177334 0.990886 0.78072 5.37394e+07 0.00371951 1.18785e+07 9.20292e+06 1.19285e+07 128 1.19374e+07 8.64498e+06 0.00319022 1.20332e+07 50.1998 0.00602828 0.994017 0 50.105 GTEX-11VI4-0226-SM-5GU6C 1 B1 2 pieces 7.4 Thyroid Thyroid 0002046 105 1168 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.9906 191903 0.967657 0.992831 0.761985 22451 1 76 0.00187169 117 0 5.40063e+07 0.0319914 317189 5.43963e+07 3.34866e+06 22476 2.68778e+07 0 0.205672 0.992831 0.756523 5.40063e+07 0.00277364 1.18703e+07 4.66760e+06 1.19245e+07 124 1.19108e+07 8.83966e+06 0.00232165 1.19971e+07 50.1804 0.00583108 0.995062 0 50.114 GTEX-11VI4-0326-SM-5EQ6L 1 B1 6 pieces; mucosa absent on all 6 pieces, can only be used for muscularis propria assessment 7.4 Stomach Stomach 0000945 119 1154 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990985 204700 0.97519 0.993562 0.821829 21807 1 76 0.001808 134 0 5.77924e+07 0.0245519 539915 5.81669e+07 7.46116e+06 21826 2.87577e+07 0 0.153361 0.993562 0.816538 5.77924e+07 0.00276846 1.25712e+07 4.98995e+06 1.26932e+07 140 1.26659e+07 1.03116e+07 0.00228699 1.2741e+07 50.1478 0.00928218 0.996139 0 50.2415 GTEX-11VI4-0426-SM-5EGHZ 1 B1 2 pieces; 10% individual fat cells diffusely distributed amonst parenchyma 7.8 Pancreas Pancreas 0001150 113 1160 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986542 175818 0.978184 0.99087 0.853667 21007 1 76 0.00225296 89 0 5.893e+07 0.0216253 285072 5.9473e+07 9.01598e+06 21021 2.92762e+07 0 0.124517 0.99087 0.845873 5.893e+07 0.00537531 1.35162e+07 1.53228e+07 1.35277e+07 102 1.35271e+07 1.66485e+07 0.00380731 1.37729e+07 50.4501 0.0047933 0.995198 0 50.0212 GTEX-11VI4-0526-SM-5EQ48 0 B1 6 pieces; well preserved, well dissected 9 Esophagus Esophagus - Mucosa 0006920 126 1147 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990678 302535 0.974811 0.993253 0.820563 23228 1 76 0.00194812 170 0 7.72464e+07 0.0248393 766288 7.77712e+07 9.87557e+06 23247 3.84356e+07 0 0.154248 0.993253 0.815026 7.72464e+07 0.00289727 1.70952e+07 9.18848e+06 1.72643e+07 200 1.72451e+07 1.40772e+07 0.00242147 1.73011e+07 50.081 0.00985311 0.995827 0 50.2461 GTEX-11VI4-0626-SM-5EQLO 0 B1 6 pieces well dissected 8.2 Esophagus Esophagus - Muscularis 0004648 129 1144 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992631 185667 0.976087 0.994536 0.836873 21865 1 76 0.00186731 161 0 7.2185e+07 0.0236695 871217 7.25815e+07 9.8656e+06 21886 3.59555e+07 0 0.139214 0.994536 0.8323 7.2185e+07 0.00275086 1.55296e+07 7.09151e+06 1.55746e+07 201 1.55202e+07 1.21909e+07 0.00230824 1.57111e+07 50.3055 0.0120033 0.996442 0 50.0724 GTEX-11VI4-0726-SM-5GU5B 0 B1 6 pieces 8.7 Vagina Vagina 0000996 135 1138 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991962 220713 0.974607 0.99384 0.802265 22740 1 76 0.00193976 127 0 5.86762e+07 0.0250665 311303 5.90399e+07 3.63049e+06 22762 2.91969e+07 0 0.172342 0.99384 0.797323 5.86762e+07 0.00276987 1.30934e+07 6.61126e+06 1.31762e+07 133 1.31530e+07 1.12716e+07 0.00235403 1.32235e+07 50.1335 0.00527276 0.995718 0 50.1577 GTEX-11VI4-0826-SM-5GU5N 0 B1 6 pieces; most are small, e.g. 3x2mm, largest 6x3mm 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 141 1132 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991732 282641 0.974993 0.994092 0.822214 22613 1 76 0.00175511 158 0 6.74796e+07 0.024738 616683 6.78806e+07 4.22648e+06 22637 3.35733e+07 0 0.15278 0.994092 0.817356 6.74796e+07 0.00270491 1.46364e+07 5.45984e+06 1.47676e+07 166 1.4697e+07 1.17354e+07 0.00222888 1.48611e+07 50.2776 0.00908482 0.996452 0 50.2231 GTEX-11VI4-1026-SM-5EQM1 0 B1 2 pieces; numerous corpora albicans comprise 50 and 25% of samples 8.3 Ovary Ovary 0000992 143 1130 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.993106 238776 0.97133 0.994689 0.803938 23040 1 76 0.00186869 218 0 8.19882e+07 0.0283538 465070 8.24259e+07 1.03157e+07 23071 4.08473e+07 0 0.167392 0.994689 0.799668 8.19882e+07 0.00267227 1.80797e+07 8.79835e+06 1.81814e+07 216 1.81539e+07 1.61835e+07 0.00226984 1.82333e+07 50.1091 0.00564228 0.996272 0 50.1402 GTEX-11VI4-1126-SM-5EQMD 0 B1 6 pieces of skin 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 146 1127 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991708 198581 0.971127 0.993751 0.798507 23553 1 76 0.00195144 180 0 7.48512e+07 0.0286934 669339 7.53218e+07 9.45469e+06 23580 3.72719e+07 0 0.17262 0.993751 0.793517 7.48512e+07 0.00301702 1.64238e+07 8.70999e+06 1.65245e+07 191 1.64585e+07 1.20897e+07 0.00248314 1.66374e+07 50.2702 0.00888639 0.995794 0 50.1529 GTEX-11VI4-1226-SM-5EQMP 1 B1 2 pieces; large pieces with interior holes 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 149 1124 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992061 153811 0.978346 0.993822 0.822876 22783 1 76 0.001882 269 0 8.54149e+07 0.0214644 2.19268e+06 8.59459e+07 1.03031e+07 22802 4.25522e+07 0 0.155471 0.993822 0.817792 8.54149e+07 0.00296633 1.88374e+07 1.34272e+07 1.88266e+07 307 1.86769e+07 1.06772e+07 0.00242321 1.91291e+07 50.5981 0.0255123 0.995582 0 49.9857 GTEX-11VI4-1426-SM-5GU6O 1 B1 6 pieces; 5 of 6 pieces with mucosa [not target] 7.6 Colon Colon - Sigmoid 0001159 162 1111 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.987833 334547 0.973119 0.991351 0.814864 24150 1 76 0.00207152 177 0 7.62249e+07 0.025819 813951 7.689e+07 5.3387e+06 24170 3.78362e+07 0 0.158254 0.991351 0.807817 7.62249e+07 0.00312597 1.67574e+07 8.15088e+06 1.6795e+07 199 1.67841e+07 1.22378e+07 0.00259687 1.70222e+07 50.3521 0.0105859 0.994869 0 50.056 GTEX-11VI4-1526-SM-5EQKC 1 B1 6 pieces well dissected full thickness of colon 8 Colon Colon - Transverse 0001157 166 1107 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991357 252838 0.973881 0.993599 0.801526 23446 1 76 0.00197064 172 0 7.27666e+07 0.025712 1.54038e+06 7.32354e+07 9.44335e+06 23472 3.62175e+07 0 0.172355 0.993599 0.796396 7.27666e+07 0.00311134 1.61159e+07 1.25843e+07 1.61664e+07 202 1.60812e+07 1.03903e+07 0.0025397 1.63599e+07 50.4295 0.0210333 0.995842 0 50.0782 GTEX-11VI4-1626-SM-5EQKO 1 B1 6 pieces; abundant lymphoid tissue [delineated] 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 177 1096 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991428 177042 0.962736 0.993209 0.745943 24419 1 76 0.00217661 164 0 7.38755e+07 0.0367925 490609 7.43807e+07 9.32411e+06 24456 3.67877e+07 0 0.216792 0.993209 0.740878 7.38755e+07 0.00301548 1.62453e+07 9.12892e+06 1.62411e+07 168 1.62393e+07 1.16609e+07 0.00259529 1.63728e+07 50.2048 0.00659592 0.994989 0 49.9936 GTEX-11VI4-1726-SM-5CVLH 0 B1 6 pieces; internal fatty island make up 10% 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 315 958 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984957 215858 0.970524 0.989505 0.77906 24442 1 76 0.00473089 170 0 7.81318e+07 0.0292662 492124 7.89604e+07 1.60099e+07 24467 3.87549e+07 0 0.191464 0.989505 0.770884 7.81318e+07 0.00687557 1.69709e+07 8.76681e+06 1.70629e+07 165 1.71329e+07 1.25785e+07 0.0057983 1.72329e+07 50.1455 0.00623254 0.994054 0 50.1352 GTEX-11VI4-1926-SM-5CVLI 1 B1 2 pieces 7.6 Muscle Muscle - Skeletal 0011907 321 952 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988648 257066 0.983142 0.991998 0.875438 20046 1 76 0.0044587 178 0 8.00823e+07 0.0166344 1.31041e+06 8.07283e+07 1.57836e+07 20056 3.97881e+07 0 0.107703 0.991998 0.868433 8.00823e+07 0.00633124 1.74694e+07 9.80979e+06 1.74082e+07 200 1.74555e+07 1.64951e+07 0.00539181 1.76676e+07 50.302 0.0162323 0.995348 0 49.9123 GTEX-11VI4-2026-SM-5CVLJ 0 B1 2 pieces; well trimmed 7.3 Blood Vessel Artery - Tibial 0007610 327 946 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986824 273049 0.97844 0.990867 0.861245 20984 1 76 0.00454421 133 0 6.72236e+07 0.0211684 359808 6.78432e+07 1.20318e+07 20995 3.33396e+07 0 0.117195 0.990867 0.853379 6.72236e+07 0.00669186 1.44209e+07 5.1895e+06 1.44754e+07 145 1.45017e+07 1.37651e+07 0.00561365 1.46536e+07 50.2604 0.00530353 0.99491 0 50.0941 GTEX-11VI4-2126-SM-5EGI1 0 B1 2 pieces; small amount of peripheral fat 7.4 Nerve Nerve - Tibial 0001323 325 948 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982383 171547 0.968732 0.987333 0.771957 23327 1 76 0.00232334 146 0 6.11964e+07 0.0310044 271677 6.19815e+07 9.13648e+06 23355 3.03699e+07 0 0.196774 0.987333 0.762179 6.11964e+07 0.00572651 1.34204e+07 5.81265e+06 1.3512e+07 139 1.35845e+07 9.91606e+06 0.00401639 1.36336e+07 50.0901 0.0043832 0.992284 0 50.17 GTEX-11WQC-0003-SM-58Q8N B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11WQC-0003-SM-5DWTG B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11WQC-0003-SM-6WBU8 B1 Blood Whole Blood 0013756 600 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11WQC-0006-SM-5LZVP B1 9.2 Blood Whole Blood 0013756 600 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991038 427310 0.975773 0.992415 0.751628 20375 1 76 0.00314542 128 0 6.99994e+07 0.0236461 281983 7.05344e+07 3.31004e+06 20393 3.48255e+07 0 0.224145 0.992415 0.745927 6.99994e+07 0.00391579 1.57063e+07 2.35084e+07 1.57828e+07 135 1.58128e+07 1.32966e+07 0.00353007 1.57766e+07 49.9428 0.00399781 0.993792 0 50.1215 GTEX-11WQC-0008-SM-5SI6R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 818 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.992824 359905 0.973053 0.994891 0.852546 20783 1 76 0.00178219 176 0 7.73612e+07 0.026647 353415 7.77585e+07 7.42335e+06 20798 3.85321e+07 0 0.120507 0.994891 0.84819 7.73612e+07 0.00277907 1.70934e+07 1.30182e+07 1.72233e+07 174 1.72143e+07 1.85121e+07 0.00227959 1.72671e+07 50.0766 0.00454503 0.996957 0 50.1892 GTEX-11WQC-0011-R10a-SM-57WCT B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989368 570981 0.957779 0.992742 0.837913 22212 1 76 0.00228549 153 0 6.28244e+07 0.0419326 4.32656e+06 6.32837e+07 7.54503e+06 22222 3.12321e+07 0 0.119866 0.992742 0.831832 6.28244e+07 0.00423608 1.36608e+07 1.7989e+07 1.37117e+07 187 1.36564e+07 6.1434e+06 0.00325747 1.39066e+07 50.454 0.0683677 0.996116 0 50.093 GTEX-11WQC-0011-R10a-SM-AHZ6D B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 608 ChIP-Seq GTEX-11WQC-0011-R10a-SM-CYKQY B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 RIP-Seq GTEX-11WQC-0011-R11b-SM-57WD6 B1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989249 754951 0.943424 0.992083 0.751677 23233 1 76 0.00241818 267 0 8.33781e+07 0.0563084 2.87871e+06 8.40435e+07 1.07598e+07 23256 4.14532e+07 0 0.191747 0.992083 0.745726 8.33781e+07 0.00405043 1.79069e+07 2.22383e+07 1.79549e+07 256 1.7938e+07 7.53026e+06 0.00323197 1.81381e+07 50.2773 0.0342526 0.994917 0 50.0669 GTEX-11WQC-0011-R1b-SM-DO932 B1, A1 7 Brain Brain - Hippocampus 0001954 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993836 650305 0.964721 0.994921 0.820901 23350 1 76 0.00246781 371 0 9.03382e+07 0.0350834 8.62446e+06 9.07994e+07 5.44743e+06 23374 4.50065e+07 0 0.14382 0.994921 0.816732 9.03382e+07 0.00290112 1.95021e+07 2.50909e+07 2.01842e+07 342 1.99184e+07 7.15089e+06 0.00268423 1.98462e+07 49.9092 0.0949837 0.996007 0 50.8594 GTEX-11WQC-0011-R2a-SM-DO927 B1, A1 6 Brain Brain - Substantia nigra 0002038 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.99461 473614 0.96852 0.995573 0.843958 21980 1 76 0.00236372 207 0 7.3317e+07 0.0312955 6.97327e+06 7.36431e+07 4.2591e+06 21992 3.65338e+07 0 0.124562 0.995573 0.840222 7.3317e+07 0.0028688 1.59441e+07 1.73727e+07 1.64809e+07 253 1.62204e+07 6.55561e+06 0.00261602 1.62573e+07 50.0568 0.0946901 0.996536 0 50.8278 GTEX-11WQC-0011-R3a-SM-DO11T B1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986631 277046 0.972533 0.991385 0.865517 20970 1 76 0.00286931 146 0 5.68991e+07 0.0272776 5.59543e+06 5.73935e+07 5.49436e+06 20981 2.82471e+07 0 0.107016 0.991385 0.858061 5.68991e+07 0.00552453 1.23682e+07 1.33464e+07 1.27924e+07 178 1.27062e+07 3.96493e+06 0.00419055 1.26717e+07 49.9319 0.0974924 0.996139 0 50.8428 GTEX-11WQC-0011-R5a-SM-5BC74 B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987182 494880 0.967687 0.991637 0.843273 22534 1 76 0.00322685 196 0 7.2934e+07 0.032113 6.36715e+06 7.3549e+07 1.96349e+07 22545 3.62023e+07 0 0.124414 0.991637 0.836221 7.2934e+07 0.00569099 1.59631e+07 2.74616e+07 1.5857e+07 242 1.55967e+07 5.44385e+06 0.00445339 1.65165e+07 51.4322 0.0865701 0.996093 0 49.8331 GTEX-11WQC-0011-R6a-SM-5BC77 B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986226 494173 0.966134 0.989922 0.835927 21901 1 76 0.00329471 196 0 6.99949e+07 0.0337067 6.56967e+06 7.07075e+07 1.73098e+07 21906 3.47878e+07 0 0.130207 0.989922 0.827502 6.99949e+07 0.00553408 1.52322e+07 3.21347e+07 1.51103e+07 238 1.48806e+07 4.82387e+06 0.00441021 1.56855e+07 51.3167 0.0929134 0.993619 0 49.7992 GTEX-11WQC-0011-R7b-SM-5BC7A B1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985949 401045 0.972086 0.990546 0.842308 21027 1 76 0.00340388 194 0 6.85693e+07 0.0277958 6.8716e+06 6.92237e+07 1.78986e+07 21036 3.40466e+07 0 0.129778 0.990546 0.834345 6.85693e+07 0.00600233 1.50175e+07 3.29549e+07 1.47912e+07 225 1.46032e+07 3.81767e+06 0.00469708 1.54742e+07 51.4479 0.0992665 0.995143 0 49.6204 GTEX-11WQC-0011-R8b-SM-57WCH B1, A1 7.5 Brain Brain - Hypothalamus 0001898 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989161 598783 0.956036 0.992381 0.828386 23354 1 76 0.00239322 153 0 6.55375e+07 0.0437683 3.83127e+06 6.60407e+07 8.50786e+06 23369 3.25786e+07 0 0.12765 0.992381 0.822075 6.55375e+07 0.00420134 1.43102e+07 1.7746e+07 1.43287e+07 200 1.42099e+07 5.76882e+06 0.00329434 1.46233e+07 50.7169 0.0580138 0.995601 0 50.0323 GTEX-11WQC-0626-SM-5EQMF 1 B1 2 pieces, mild fibrosis, some hemosiderin-laden macrophages 6.5 Lung Lung 0008952 693 665 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990297 197650 0.969445 0.992284 0.688112 23028 1 76 0.00255658 123 0 6.73992e+07 0.0301906 317599 6.79234e+07 7.32685e+06 23061 3.35226e+07 0 0.281333 0.992284 0.682802 6.73992e+07 0.00356155 1.48404e+07 6.46255e+06 1.4938e+07 141 1.49377e+07 8.8159e+06 0.00305806 1.49691e+07 50.0524 0.00467584 0.99427 0 50.1638 GTEX-11WQC-0626-SM-CYKQZ 1 B1 2 pieces, mild fibrosis, some hemosiderin-laden macrophages 6.5 Lung Lung 0008952 693 665 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 RIP-Seq GTEX-11WQC-0726-SM-5EQMR 1 B1 2 pieces, congested, includes capsule (target is 1 cm below capsule), chronic inflammation 6.6 Liver Liver 0001114 696 662 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.99175 294116 0.970174 0.993901 0.807268 21695 1 76 0.00243669 154 0 7.46922e+07 0.0296162 1.29897e+06 7.51506e+07 1.01409e+07 21720 3.71817e+07 0 0.162907 0.993901 0.802344 7.46922e+07 0.00345072 1.61354e+07 1.3233e+07 1.61576e+07 197 1.61256e+07 1.01751e+07 0.00294261 1.63144e+07 50.291 0.0172849 0.996051 0 50.0343 GTEX-11WQC-1726-SM-5GU4W 1 B1 2 pieces, 50-75% fibrous tissue and ducts with gynecomastoid change 6 Breast Breast - Mammary Tissue 0008367 728 630 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988756 233791 0.975754 0.991122 0.811355 23852 1 76 0.00210982 156 0 7.15022e+07 0.023756 180189 7.21427e+07 4.50656e+06 23877 3.55439e+07 0 0.1644 0.991122 0.804151 7.15022e+07 0.00299862 1.57038e+07 6.78336e+06 1.58603e+07 163 1.58329e+07 1.41476e+07 0.00255316 1.59012e+07 50.1076 0.00249767 0.993487 0 50.2478 GTEX-11WQC-1826-SM-5GU59 1 B1 6 pieces, well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 732 626 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989584 242216 0.978043 0.992197 0.829563 22072 1 76 0.0022081 159 0 6.34361e+07 0.0216043 231892 6.3935e+07 4.18186e+06 22092 3.15211e+07 0 0.148479 0.992197 0.823091 6.34361e+07 0.00331247 1.38397e+07 6.98308e+06 1.39536e+07 149 1.3936e+07 1.2375e+07 0.00275883 1.40212e+07 50.1523 0.003627 0.994811 0 50.2049 GTEX-11WQC-2326-SM-5EQKE 1 B1 2 pieces, spermatogenesis present, increased peritubular fibrosis 6.1 Testis Testis 0000473 750 608 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989435 280638 0.919925 0.991627 0.728613 33221 1 76 0.00224021 184 0 8.3981e+07 0.0796503 605791 8.469e+07 1.21106e+07 33281 4.18089e+07 0 0.191312 0.991627 0.722513 8.3981e+07 0.00308538 1.70565e+07 1.34373e+07 1.71576e+07 171 1.72011e+07 1.47932e+07 0.00266186 1.71808e+07 49.9705 0.00715304 0.99382 0 50.1477 GTEX-11WQC-2426-SM-5EQKQ 1 B1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 817 541 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988899 194488 0.973787 0.990921 0.766484 22716 1 76 0.00251607 142 0 6.88405e+07 0.0258685 706233 6.94713e+07 8.28179e+06 22745 3.42483e+07 0 0.207304 0.990921 0.759525 6.88405e+07 0.00368514 1.51885e+07 7.50565e+06 1.51767e+07 161 1.51565e+07 9.96751e+06 0.00309941 1.5345e+07 50.3089 0.0101658 0.992943 0 49.9805 GTEX-11WQC-2526-SM-5CVLE 1 B1 6 pieces, fairly well trimmed, squamous epithelium measures 20-30 microns thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 818 540 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986474 197254 0.974966 0.990214 0.797797 23800 1 76 0.00502904 150 0 6.65411e+07 0.0247312 324895 6.71987e+07 1.24298e+07 23826 3.30226e+07 0 0.17717 0.990214 0.78999 6.65411e+07 0.00715432 1.45046e+07 7.48359e+06 1.45955e+07 133 1.46495e+07 1.19873e+07 0.00608766 1.46868e+07 50.0636 0.00483484 0.993955 0 50.1562 GTEX-11WQC-2626-SM-5CVLF 1 B1 2 pieces, ~10% internal fat, one piece includes portion of tendon 7 Muscle Muscle - Skeletal 0011907 819 539 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.989037 216832 0.980839 0.992233 0.863733 21711 1 76 0.00481604 131 0 7.95892e+07 0.0189556 1.07382e+06 8.02122e+07 1.42958e+07 21721 3.95454e+07 0 0.117105 0.992233 0.857024 7.95892e+07 0.0068245 1.73344e+07 7.62239e+06 1.73631e+07 155 1.7415e+07 1.74128e+07 0.00581703 1.75146e+07 50.1426 0.0133872 0.995428 0 50.0414 GTEX-11WQC-2726-SM-5CVLG 1 B1 2 pieces, well trimmed 5.9 Blood Vessel Artery - Tibial 0007610 821 537 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987274 170436 0.973649 0.990657 0.816323 21814 1 76 0.00482985 137 0 7.03494e+07 0.0259427 232627 7.10128e+07 1.17742e+07 21831 3.4897e+07 0 0.157326 0.990657 0.808696 7.03494e+07 0.00687677 1.50211e+07 5.7036e+06 1.51251e+07 144 1.51382e+07 1.31936e+07 0.00584982 1.52347e+07 50.159 0.00327584 0.994041 0 50.1724 GTEX-11WQC-2826-SM-5GU7A 1 B1 2 pieces, well trimmed 6.6 Nerve Nerve - Tibial 0001323 824 534 BP-43730 RNA Extraction from Paxgene-derived Lysate Plate Based 09/18/2013 LCSET-4803,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.990671 436444 0.971314 0.992806 0.743982 24194 1 76 0.00240791 168 0 8.20832e+07 0.0283589 108599 8.2678e+07 5.31027e+06 24235 4.07975e+07 0 0.227332 0.992806 0.738629 8.20832e+07 0.00344385 1.80437e+07 6.9756e+06 1.81916e+07 179 1.81526e+07 1.32194e+07 0.00292477 1.82539e+07 50.1391 0.00131352 0.994941 0 50.204 GTEX-11WQK-0003-SM-58Q8U B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11WQK-0003-SM-5DWTN B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11WQK-0003-SM-6WBUB B1 Blood Whole Blood 0013756 474 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11WQK-0005-SM-5O9AV B1 7.3 Blood Whole Blood 0013756 474 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.971785 1.28478e+06 0.943033 0.975738 0.713537 22346 1 76 0.00233799 140 0 1.05479e+08 0.0559118 113422 1.08101e+08 1.53661e+07 22381 5.23042e+07 0 0.229496 0.975738 0.696225 1.05479e+08 0.00439422 2.31013e+07 1.32186e+08 2.35212e+07 162 2.3544e+07 2.19516e+07 0.00336194 2.35485e+07 50.0048 0.00104922 0.97969 0 50.4504 GTEX-11WQK-0008-SM-5SI6T B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 731 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.992767 357425 0.976338 0.994864 0.868344 20533 1 76 0.00166127 211 0 8.11914e+07 0.023381 427972 8.16105e+07 7.50608e+06 20547 4.04403e+07 0 0.107993 0.994864 0.863885 8.11914e+07 0.00258347 1.80319e+07 1.19997e+07 1.81698e+07 218 1.81646e+07 1.92071e+07 0.0021214 1.82051e+07 50.0557 0.00524408 0.996961 0 50.1905 GTEX-11WQK-0011-R10a-SM-5BC6R B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985631 373199 0.968486 0.991108 0.867629 22264 1 76 0.00258278 149 0 5.78234e+07 0.0312385 5.35246e+06 5.83421e+07 1.43513e+07 22272 2.86781e+07 0 0.100857 0.991108 0.859915 5.78234e+07 0.00534721 1.29305e+07 1.39354e+07 1.26702e+07 181 1.26154e+07 5.82828e+06 0.00395736 1.32757e+07 51.2751 0.0917426 0.996586 0 49.4918 GTEX-11WQK-0011-R10a-SM-AHZ6L B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 524 ChIP-Seq GTEX-11WQK-0011-R10a-SM-CYKOX B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 RIP-Seq GTEX-11WQK-0011-R11a-SM-5BC6W B1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.987128 499744 0.939439 0.990838 0.754381 23888 1 76 0.00284006 159 0 6.79231e+07 0.0602456 2.73782e+06 6.85511e+07 1.45668e+07 23910 3.37251e+07 0 0.185058 0.990838 0.747469 6.79231e+07 0.00487753 1.47078e+07 2.35571e+07 1.47576e+07 176 1.4801e+07 6.5751e+06 0.00385498 1.49027e+07 50.1712 0.0399384 0.994549 0 50.0844 GTEX-11WQK-0011-R3b-SM-DO93K B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 524 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993835 545535 0.966057 0.994877 0.851709 23179 1 76 0.00183785 371 0 8.33936e+07 0.0336967 1.02137e+07 8.3823e+07 4.33346e+06 23192 4.15563e+07 0 0.114348 0.994877 0.847346 8.33936e+07 0.0024492 1.83437e+07 1.98107e+07 1.8654e+07 354 1.85092e+07 7.47148e+06 0.00214321 1.85593e+07 50.0675 0.121849 0.99592 0 50.4192 GTEX-11WQK-0011-R8a-SM-5BC7C B1, A1 6.4 Brain Brain - Hypothalamus 0001898 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985234 383742 0.965571 0.990343 0.855431 21383 1 76 0.00273678 185 0 6.04669e+07 0.0343234 6.44029e+06 6.10565e+07 1.56217e+07 21389 2.99972e+07 0 0.11014 0.990343 0.84717 6.04669e+07 0.00555617 1.35404e+07 2.06499e+07 1.31127e+07 217 1.29977e+07 3.15682e+06 0.00413921 1.39213e+07 51.7154 0.105481 0.995452 0 49.1976 GTEX-11WQK-0011-R9b-SM-5BC6N B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 524 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985913 684814 0.949268 0.991029 0.832403 21269 1 76 0.002833 202 0 6.75289e+07 0.0504867 5.17526e+06 6.81402e+07 1.84454e+07 21280 3.34938e+07 0 0.116865 0.991029 0.824935 6.75289e+07 0.00531083 1.46801e+07 2.25885e+07 1.50489e+07 205 1.47899e+07 6.93028e+06 0.00406552 1.52644e+07 50.7894 0.0759501 0.996146 0 50.6202 GTEX-11WQK-0226-SM-5EQLI 1 B1 2 pieces, focal adherent fat, ~0.5 mm, delineated 6.7 Heart Heart - Atrial Appendage 0006631 631 1045 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990347 221432 0.97605 0.992459 0.7904 21504 1 76 0.00200828 154 0 7.60237e+07 0.0237655 1.26026e+06 7.66013e+07 1.03568e+07 21522 3.78528e+07 0 0.185651 0.992459 0.784439 7.60237e+07 0.00302512 1.63925e+07 7.20075e+06 1.64219e+07 195 1.64214e+07 1.14492e+07 0.00251562 1.65434e+07 50.1851 0.0164522 0.994572 0 50.0448 GTEX-11WQK-0326-SM-5EQL1 1 B1 6 pieces, adherenet serosa on several up to ~0.4mm, rep delineated. Minimal atherosis, <0.1mm 7.3 Blood Vessel Artery - Aorta 0001496 642 1034 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.984814 1.48134e+06 0.905033 0.987588 0.673714 22017 1 76 0.00225661 133 0 7.72857e+07 0.0945386 303939 7.8257e+07 1.09248e+07 22046 3.84128e+07 0 0.231318 0.987588 0.665352 7.72857e+07 0.00354241 1.55679e+07 6.81572e+07 1.59463e+07 144 1.59684e+07 1.23588e+07 0.0028977 1.57861e+07 49.7131 0.00388386 0.990363 0 50.6004 GTEX-11WQK-0526-SM-5EQLD 0 B1 6 pieces, minimal fat, squamous epitheliums is ~40 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 731 945 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98946 263451 0.977402 0.992309 0.760723 23552 1 76 0.00213233 221 0 8.939e+07 0.0224103 1.19417e+06 9.00828e+07 1.28408e+07 23585 4.4463e+07 0 0.216679 0.992309 0.754872 8.939e+07 0.00317364 1.98064e+07 1.0135e+07 1.99065e+07 209 1.99571e+07 1.60111e+07 0.00265149 2.00056e+07 50.0607 0.0132564 0.995159 0 50.1261 GTEX-11WQK-0726-SM-5GU71 0 B1 2 pieces, ~10-15% interstitial fat, delineated (rep) 8.3 Muscle Muscle - Skeletal 0011907 738 938 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.99224 208624 0.98101 0.994539 0.862051 17871 1 76 0.00163647 112 0 5.22668e+07 0.0187801 740414 5.25538e+07 3.4478e+06 17878 2.60211e+07 0 0.118959 0.994539 0.857343 5.22668e+07 0.00239055 1.13364e+07 5.12224e+06 1.1444e+07 123 1.14354e+07 1.12905e+07 0.00201264 1.14558e+07 50.0446 0.0140887 0.996837 0 50.2361 GTEX-11WQK-0726-SM-CYKV6 0 B1 2 pieces, ~10-15% interstitial fat, delineated (rep) 8.3 Muscle Muscle - Skeletal 0011907 738 938 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11WQK-1026-SM-5EQLX 0 B1 6 pieces, minimal fat, squamous epitheliums is ~50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 762 914 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989113 421835 0.977028 0.992057 0.745518 23121 1 76 0.00215453 149 0 7.60187e+07 0.0227963 729838 7.66274e+07 9.77947e+06 23150 3.78022e+07 0 0.23151 0.992057 0.739596 7.60187e+07 0.00329845 1.69218e+07 8.54106e+06 1.70737e+07 158 1.71152e+07 1.3437e+07 0.00272479 1.70981e+07 49.9751 0.0095245 0.995001 0 50.2233 GTEX-11WQK-1226-SM-5GU5Z 2 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 776 900 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.987602 477848 0.979083 0.991057 0.727006 23557 1 76 0.00260001 209 0 1.00469e+08 0.0205096 527534 1.01376e+08 5.69185e+06 23594 4.98608e+07 0 0.252077 0.991057 0.720504 1.00469e+08 0.00353102 2.22729e+07 1.00566e+07 2.24525e+07 231 2.24392e+07 1.51694e+07 0.00306389 2.26197e+07 50.2003 0.00520374 0.994513 0 50.2008 GTEX-11WQK-1226-SM-CYKV5 2 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 776 900 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 RIP-Seq GTEX-11WQK-1526-SM-5EGKN 1 B1 2 pieces, minimal fibrous/vascular tissue, good specimens 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 782 894 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987964 315110 0.976204 0.991354 0.780479 22442 1 76 0.00193352 154 0 7.3148e+07 0.0235706 701236 7.3786e+07 6.31894e+06 22460 3.63278e+07 0 0.195724 0.991354 0.773731 7.3148e+07 0.00313883 1.59504e+07 8.45046e+06 1.61166e+07 171 1.61355e+07 1.21784e+07 0.00253412 1.61698e+07 50.0529 0.00950365 0.994744 0 50.2592 GTEX-11WQK-1826-SM-5EQM2 1 B1 4 pieces 6 Esophagus Esophagus - Muscularis 0004648 787 889 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991002 174796 0.974138 0.993075 0.807828 21768 1 76 0.00200807 195 0 7.38174e+07 0.0257031 2.06138e+06 7.43322e+07 9.05741e+06 21789 3.6748e+07 0 0.16631 0.993075 0.802233 7.38174e+07 0.00319637 1.62565e+07 7.41956e+06 1.62974e+07 204 1.62416e+07 9.96583e+06 0.00260098 1.64594e+07 50.333 0.027732 0.995147 0 50.0629 GTEX-11WQK-2126-SM-5EQME 2 B1 6 pieces, all muscularis, switch with 2525 6.3 Colon Colon - Transverse 0001157 801 875 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 EXCLUDE 0.989392 240346 0.970759 0.992174 0.780168 22942 1 76 0.00209941 162 0 7.86264e+07 0.0290225 1.10563e+06 7.92466e+07 1.15456e+07 22969 3.91037e+07 0 0.190591 0.992174 0.774062 7.86264e+07 0.00316223 1.70729e+07 7.74001e+06 1.72309e+07 189 1.72424e+07 1.24285e+07 0.00262933 1.7272e+07 50.0428 0.0139517 0.994955 0 50.2304 GTEX-11WQK-2226-SM-5CVL7 1 B1 6 pieces, all muscularis, good specimens 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 803 873 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983551 283560 0.96965 0.987172 0.785739 23003 1 76 0.00482719 151 0 7.69184e+07 0.0301795 1.65970e+06 7.79179e+07 1.36302e+07 23026 3.81588e+07 0 0.183911 0.987172 0.77566 7.69184e+07 0.0069761 1.67808e+07 9.01201e+06 1.68725e+07 173 1.6859e+07 1.03904e+07 0.0058977 1.70616e+07 50.2986 0.0213007 0.990794 0 50.1362 GTEX-11WQK-2326-SM-5GU4Z 3 B1 6 pieces, marked autolysia; lymphoid component is ~20% total 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 806 870 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.989809 314822 0.97381 0.992325 0.762936 22507 1 76 0.00198294 158 0 7.62304e+07 0.0259721 683638 7.682e+07 5.31788e+06 22527 3.79218e+07 0 0.210874 0.992325 0.757081 7.62304e+07 0.0028228 1.66788e+07 7.51941e+06 1.68792e+07 172 1.68889e+07 1.26069e+07 0.00240181 1.68541e+07 49.9484 0.00889922 0.994841 0 50.2985 GTEX-11WQK-2426-SM-5GU5C 1 B1 2 pieces, adipose tissue; no ductal elements 6 Breast Breast - Mammary Tissue 0008367 807 869 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.985885 284822 0.977506 0.989179 0.790259 21656 1 76 0.00197484 150 0 7.12187e+07 0.0222574 622427 7.19978e+07 4.95448e+06 21675 3.53692e+07 0 0.187248 0.989179 0.781707 7.12187e+07 0.00290946 1.55345e+07 6.49891e+06 1.56936e+07 170 1.56753e+07 1.19525e+07 0.0024406 1.57798e+07 50.1661 0.00864509 0.992474 0 50.2547 GTEX-11WQK-2526-SM-5CVL8 3 B1 6 pieces, mucsoa competely autlyzyed; switch with 2125 6.2 Colon Colon - Sigmoid 0001159 810 866 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.983655 212939 0.973446 0.988371 0.789719 22428 1 76 0.0048101 114 0 6.16853e+07 0.0263211 567133 6.24111e+07 1.18912e+07 22448 3.05785e+07 0 0.183727 0.988371 0.780535 6.16853e+07 0.00714676 1.34271e+07 5.77839e+06 1.35314e+07 128 1.36004e+07 9.93074e+06 0.00597285 1.36352e+07 50.0639 0.00908705 0.993087 0 50.1934 GTEX-11WQK-2626-SM-5EQ4K 3 B1 6 pieces, mucosa largely sloughed/autolyzed; one surviving focus (delineated) is markedly autolyzed 7.1 Stomach Stomach 0000945 813 863 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989114 263419 0.975198 0.992261 0.785857 21742 1 76 0.00202225 133 0 6.51643e+07 0.0245551 314497 6.56726e+07 8.24209e+06 21762 3.23754e+07 0 0.189341 0.992261 0.779775 6.51643e+07 0.00313777 1.42524e+07 6.48794e+06 1.44174e+07 148 1.44268e+07 1.15453e+07 0.00257824 1.44429e+07 50.0279 0.00478886 0.995408 0 50.2877 GTEX-11WQK-2726-SM-5EQMU 2 B1 2 pieces, glandular component moderate-marked autolysis (2-3) 5.9 Prostate Prostate 0002367 814 862 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988443 242855 0.967145 0.990708 0.745541 23106 1 76 0.00217091 144 0 6.70684e+07 0.0326807 1.50183e+06 6.76975e+07 8.65394e+06 23136 3.33537e+07 0 0.221604 0.990708 0.738614 6.70684e+07 0.00342976 1.48121e+07 8.49751e+06 1.48284e+07 166 1.4782e+07 7.99615e+06 0.0027989 1.5006e+07 50.3761 0.0221844 0.992973 0 50.0275 GTEX-11WQK-2826-SM-5EQKH 2 B1 2 pieces; spermatogenesis present but appears redueced 6.8 Testis Testis 0000473 816 860 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989508 327584 0.942283 0.991538 0.702911 32340 1 76 0.00223867 164 0 8.22887e+07 0.0574383 1.23225e+06 8.2991e+07 1.00727e+07 32404 4.09585e+07 0 0.239373 0.991538 0.696963 8.22887e+07 0.00311656 1.75686e+07 1.20361e+07 1.75767e+07 185 1.7589e+07 1.13693e+07 0.00267672 1.77127e+07 50.1752 0.014848 0.993568 0 50.0115 GTEX-11WQK-2926-SM-5EQKT 1 B1 2 pieces, excellent specimens; glandular parenchmyma is ~80% total tisssue 8.7 Salivary Gland Minor Salivary Gland 0006330 817 859 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987968 269204 0.977495 0.990138 0.796871 22479 1 76 0.0022395 228 0 8.17856e+07 0.0216921 492545 8.26001e+07 9.86848e+06 22505 4.06928e+07 0 0.180623 0.990138 0.789013 8.17856e+07 0.00324884 1.86916e+07 2.17577e+07 1.86751e+07 219 1.86995e+07 1.46798e+07 0.00274307 1.88416e+07 50.1892 0.005963 0.992309 0 49.978 GTEX-11WQK-3026-SM-5EQL6 1 B1 2 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 860 816 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990126 266686 0.966023 0.993254 0.822936 24511 1 76 0.00205653 200 0 6.99339e+07 0.0337215 4.06509e+06 7.04089e+07 9.04385e+06 24527 3.47683e+07 0 0.143087 0.993254 0.817384 6.99339e+07 0.00356006 1.56012e+07 1.06096e+07 1.53941e+07 220 1.5289e+07 7.31354e+06 0.00280593 1.59133e+07 51.0004 0.0577355 0.996381 0 49.6658 GTEX-11WQK-3126-SM-5EGI2 1 B1 2 pieces, no abnormalities; Purkinje cells well visualized, rep delineated 6.1 Brain Brain - Cerebellum 0002037 861 815 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.982259 375452 0.928638 0.987494 0.733759 24061 1 76 0.00254878 129 0 6.17968e+07 0.0711612 2.85656e+06 6.25794e+07 9.31029e+06 24082 3.06458e+07 0 0.194879 0.987494 0.724583 6.17968e+07 0.00612997 1.31634e+07 2.20645e+07 1.324e+07 155 1.32886e+07 5.26693e+06 0.00432988 1.34067e+07 50.2212 0.0456469 0.992729 0 50.145 GTEX-11WQK-3226-SM-5EGI3 1 B1 1 piece, adenohypophysis, 20% dura, delineated 6.9 Pituitary Pituitary 0000007 862 814 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984961 226810 0.954985 0.989033 0.74975 23553 1 76 0.00238653 112 0 5.64644e+07 0.0448248 425458 5.70905e+07 8.48115e+06 23580 2.80488e+07 0 0.205235 0.989033 0.741528 5.64644e+07 0.0052998 1.20125e+07 9.88102e+06 1.21251e+07 126 1.21826e+07 7.86821e+06 0.00383717 1.21684e+07 49.9709 0.00745234 0.993106 0 50.2333 GTEX-11XUK-0003-SM-58Q8M B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11XUK-0003-SM-5DWTF B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11XUK-0003-SM-6WBU7 B1 Blood Whole Blood 0013756 -54 BP-40386 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11XUK-0005-SM-5LU9F B1 9.4 Blood Whole Blood 0013756 -54 BP-40354 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989508 508759 0.96798 0.991446 0.807148 19449 1 76 0.004461 109 0 6.83933e+07 0.0316796 194901 6.89834e+07 6.30102e+06 19455 3.4021e+07 0 0.160832 0.991446 0.800243 6.83933e+07 0.0037196 1.52369e+07 4.01635e+07 1.53183e+07 124 1.53528e+07 1.50617e+07 0.00409103 1.53431e+07 49.9841 0.00282533 0.993384 0 50.1331 GTEX-11XUK-0008-SM-5S2WD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 333 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.994342 354086 0.97751 0.995682 0.864397 19964 1 76 0.00162664 170 0 7.8949e+07 0.022197 388773 7.92914e+07 7.45230e+06 19971 3.93539e+07 0 0.113113 0.995682 0.860665 7.8949e+07 0.00240516 1.76191e+07 1.08919e+07 1.7742e+07 184 1.77194e+07 1.92461e+07 0.00201538 1.77516e+07 50.0454 0.00490309 0.997022 0 50.1737 GTEX-11XUK-0126-SM-5CVLK 1 B1 2 pieces; one 60% fat, other 20% 6.6 Adrenal Gland Adrenal Gland 0002369 100 1341 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986931 211716 0.977522 0.991062 0.83643 22255 1 76 0.0048297 130 0 6.6517e+07 0.0221886 1.58357e+06 6.71168e+07 1.28347e+07 22268 3.30144e+07 0 0.141092 0.991062 0.828954 6.6517e+07 0.00691987 1.46913e+07 9.87664e+06 1.46635e+07 146 1.46576e+07 1.07596e+07 0.00587043 1.49375e+07 50.4728 0.0235943 0.995194 0 49.9525 GTEX-11XUK-0226-SM-5EQLW 0 B1 2 pieces; moderate degree of Hashimoto (lymphocytic) thyroiditis 8.3 Thyroid Thyroid 0002046 101 1340 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98929 266634 0.961318 0.991374 0.714131 25322 1 76 0.00281163 136 0 7.67461e+07 0.0362909 347870 7.74139e+07 9.76066e+06 25373 3.8118e+07 0 0.247188 0.991374 0.707971 7.67461e+07 0.00375563 1.68962e+07 1.30193e+07 1.69526e+07 160 1.69878e+07 1.08693e+07 0.00328264 1.70142e+07 50.0388 0.00449364 0.993459 0 50.0834 GTEX-11XUK-0426-SM-5EQML 1 B1 2 pieces; numerous blood vessels focally (annotated) 6 Spleen Spleen 0002106 104 1337 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989499 400606 0.965638 0.992257 0.799558 23165 1 76 0.00231961 144 0 6.48287e+07 0.0336289 324500 6.53346e+07 8.11556e+06 23189 3.22107e+07 0 0.16608 0.992257 0.793367 6.48287e+07 0.00363746 1.42511e+07 8.04597e+06 1.42973e+07 159 1.42787e+07 1.01697e+07 0.0029767 1.4446e+07 50.2912 0.00496674 0.995015 0 50.0808 GTEX-11XUK-0626-SM-5N9ES 1 B1 2 pieces; one large duct with PanIN !a 5.7 Pancreas Pancreas 0001150 112 1329 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988596 373712 0.977381 0.990384 0.856114 22305 1 76 0.00404786 160 0 1.05567e+08 0.022177 640013 1.06592e+08 5.44315e+06 22327 5.24847e+07 0 0.121267 0.990384 0.847881 1.05567e+08 0.00418525 2.41371e+07 2.81999e+07 2.46183e+07 189 2.45563e+07 2.83251e+07 0.00411643 2.43856e+07 49.8256 0.00600431 0.992171 0 50.4935 GTEX-11XUK-0726-SM-5EQMX 0 B1 6 pieces; well trimmed muscle 8.2 Esophagus Esophagus - Muscularis 0004648 128 1313 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992544 260597 0.977047 0.994216 0.836285 21191 1 76 0.00196189 174 0 7.17e+07 0.0226529 1.07164e+06 7.21171e+07 8.72545e+06 21209 3.5715e+07 0 0.140763 0.994216 0.831447 7.17e+07 0.00287333 1.56255e+07 8.24901e+06 1.56604e+07 184 1.56074e+07 1.23805e+07 0.00241685 1.57965e+07 50.3011 0.0148598 0.995887 0 50.0557 GTEX-11XUK-0826-SM-5GU6P 0 B1 6 pieces; prominent submucosal glands (1 mm) [annotated] 8.4 Esophagus Esophagus - Mucosa 0006920 135 1306 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98987 240930 0.976466 0.992771 0.824722 22631 1 76 0.00193989 140 0 6.15516e+07 0.023183 401192 6.19998e+07 4.05277e+06 22646 3.0618e+07 0 0.151744 0.992771 0.81876 6.15516e+07 0.00272876 1.37896e+07 7.04798e+06 1.38884e+07 144 1.391e+07 1.2116e+07 0.00233317 1.39388e+07 50.0516 0.00647086 0.995672 0 50.1786 GTEX-11XUK-0926-SM-5EQL3 0 B1 6 pieces; well trimmed muscularis 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 140 1301 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992098 156380 0.97868 0.994074 0.848439 21440 1 76 0.00194495 144 0 6.3178e+07 0.0210111 810813 6.35546e+07 8.85725e+06 21455 3.14657e+07 0 0.130241 0.994074 0.843411 6.3178e+07 0.00285734 1.37832e+07 5.96719e+06 1.3823e+07 157 1.37978e+07 1.13653e+07 0.00240024 1.39288e+07 50.2362 0.0127577 0.996049 0 50.0721 GTEX-11XUK-1326-SM-5EQM4 0 B1 6 pieces 8.6 Vagina Vagina 0000996 163 1278 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991806 192622 0.97681 0.993313 0.798829 22367 1 76 0.0021311 140 0 6.96411e+07 0.0229188 297203 7.011e+07 8.87034e+06 22390 3.47014e+07 0 0.177981 0.993313 0.793487 6.96411e+07 0.00297508 1.56702e+07 1.03507e+07 1.57162e+07 161 1.57167e+07 1.26527e+07 0.00255245 1.57718e+07 50.0874 0.0042391 0.994821 0 50.0732 GTEX-11XUK-1426-SM-5EQMG 1 B1 6 pieces; muscularis in 5 of 6; 3 small lymphoid nodules 7.7 Small Intestine Small Intestine - Terminal Ileum 0001211 164 1277 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989645 247478 0.965684 0.992071 0.75648 24621 1 76 0.00230063 163 0 7.41419e+07 0.033808 497839 7.47344e+07 1.0626e+07 24651 3.68902e+07 0 0.209203 0.992071 0.750482 7.41419e+07 0.00333708 1.63275e+07 8.77596e+06 1.63977e+07 168 1.64052e+07 1.15666e+07 0.00281759 1.64892e+07 50.1277 0.00666144 0.994498 0 50.1072 GTEX-11XUK-1626-SM-5GU5O 0 B1 2 pieces; corpora albicans; inactive 7.6 Ovary Ovary 0000992 167 1274 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990507 342643 0.975445 0.993253 0.763736 22513 1 76 0.001796 147 0 7.27602e+07 0.0242245 140848 7.32544e+07 4.82805e+06 22549 3.61942e+07 0 0.211709 0.993253 0.758583 7.27602e+07 0.00253446 1.61261e+07 7.28087e+06 1.6278e+07 159 1.63226e+07 1.33883e+07 0.00216421 1.62759e+07 49.9285 0.00192272 0.995999 0 50.2343 GTEX-11XUK-1726-SM-5GU61 0 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 169 1272 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991584 243225 0.978495 0.994085 0.846675 21302 1 76 0.00179747 131 0 5.62096e+07 0.0212504 581717 5.65441e+07 3.76086e+06 21321 2.79681e+07 0 0.13182 0.994085 0.841667 5.62096e+07 0.00273907 1.25132e+07 5.06754e+06 1.26255e+07 147 1.25973e+07 9.69964e+06 0.00226709 1.26758e+07 50.1553 0.0102878 0.996586 0 50.2233 GTEX-11XUK-2026-SM-5EQLF 0 B1 6 pieces; well trimmed; up to 20% intradermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 334 1107 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989337 232635 0.972617 0.99213 0.802375 23486 1 76 0.00209969 184 0 6.64911e+07 0.0271199 324203 6.70186e+07 9.84550e+06 23511 3.30777e+07 0 0.170242 0.99213 0.79606 6.64911e+07 0.00321501 1.4496e+07 7.64522e+06 1.45817e+07 155 1.4593e+07 1.19179e+07 0.00265578 1.46628e+07 50.1193 0.00483751 0.994922 0 50.1473 GTEX-11XUK-2126-SM-5EQLR 0 B1 2 pieces 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 335 1106 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991651 198640 0.976542 0.99368 0.815123 22848 1 76 0.00204091 162 0 6.79831e+07 0.0231698 597976 6.84155e+07 8.90570e+06 22867 3.38497e+07 0 0.161419 0.99368 0.809971 6.79831e+07 0.00291732 1.50622e+07 7.19259e+06 1.51304e+07 170 1.51049e+07 1.12034e+07 0.00247822 1.52198e+07 50.1894 0.00874035 0.995708 0 50.1129 GTEX-11XUK-2226-SM-5CVLL 0 B1 2 pieces 6.8 Muscle Muscle - Skeletal 0011907 338 1103 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987513 223110 0.983408 0.99143 0.878565 19900 1 76 0.00468555 136 0 6.72548e+07 0.0163927 1.66271e+06 6.78362e+07 1.33445e+07 19908 3.33913e+07 0 0.104843 0.99143 0.871035 6.72548e+07 0.00663009 1.47264e+07 9.90133e+06 1.4891e+07 149 1.48481e+07 1.27792e+07 0.00565398 1.50036e+07 50.2604 0.0245107 0.995346 0 50.2778 GTEX-11XUK-2326-SM-5CVLM 0 B1 2 pieces; no extraneous fat 7.1 Nerve Nerve - Tibial 0001323 342 1099 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985127 285723 0.972208 0.989709 0.776607 23615 1 76 0.00475817 147 0 7.12126e+07 0.0275415 316439 7.19531e+07 1.32624e+07 23648 3.5305e+07 0 0.195602 0.989709 0.768614 7.12126e+07 0.00713746 1.56331e+07 6.86053e+06 1.57669e+07 146 1.58521e+07 1.13416e+07 0.00594231 1.58595e+07 50.0117 0.00439785 0.99429 0 50.2131 GTEX-11XUK-2426-SM-5GU72 0 B1 2 pieces; no lesions 7.3 Blood Vessel Artery - Tibial 0007610 345 1096 BP-43753 RNA Extraction from Paxgene-derived Lysate Plate Based 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.988761 248394 0.976761 0.991538 0.850192 20373 1 76 0.0018397 133 0 5.98801e+07 0.0228303 297745 6.03911e+07 3.9343e+06 20381 2.97489e+07 0 0.126569 0.991538 0.842998 5.98801e+07 0.00282599 1.2888e+07 4.1919e+06 1.30476e+07 146 1.30097e+07 1.2044e+07 0.00233146 1.30857e+07 50.1455 0.00493028 0.994315 0 50.3076 GTEX-11XUK-5016-SM-AN3X4 B1 Muscle Muscle - Skeletal 0011907 337 ChIP-Seq GTEX-11ZTS-0001-SM-58Q8K B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZTS-0001-SM-5DWTD B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11ZTS-0001-SM-6WBU5 B1 Blood Whole Blood 0013756 581 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZTS-0005-SM-5NQ8A B1 8.7 Blood Whole Blood 0013756 581 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.978753 433080 0.974883 0.980834 0.793671 18652 1 76 0.00241311 102 0 7.18894e+07 0.0239615 246946 7.32941e+07 6.18659e+06 18659 3.5751e+07 0 0.181211 0.980834 0.77846 7.18894e+07 0.00365671 1.65852e+07 9.18862e+07 1.67911e+07 123 1.67976e+07 1.72895e+07 0.00303359 1.67447e+07 49.9212 0.00336925 0.982916 0 50.3084 GTEX-11ZTS-0008-SM-5S2VC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 599 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991132 455670 0.976377 0.994111 0.871672 19935 1 76 0.00161994 171 0 7.88786e+07 0.0233816 496129 7.93459e+07 7.5567e+06 19945 3.92486e+07 0 0.104704 0.994111 0.866539 7.88786e+07 0.0027286 1.75607e+07 1.26315e+07 1.77342e+07 185 1.7746e+07 1.92457e+07 0.00217261 1.77884e+07 50.0596 0.00625274 0.99709 0 50.2458 GTEX-11ZTS-0011-R10a-SM-DO93S B1, A1 7.6 Brain Brain - Frontal Cortex (BA9) 0009834 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995542 485250 0.968285 0.996199 0.855949 22921 1 76 0.00178745 270 0 8.83908e+07 0.0314035 6.6492e+06 8.8728e+07 4.60652e+06 22934 4.4069e+07 0 0.112336 0.996199 0.852696 8.83908e+07 0.00234001 1.93276e+07 1.92504e+07 1.96426e+07 330 1.94338e+07 9.05217e+06 0.00206355 1.9575e+07 50.181 0.0749391 0.996857 0 50.4041 GTEX-11ZTS-0011-R11a-SM-DO113 B1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985836 919220 0.95453 0.990488 0.788464 24853 1 76 0.00244951 275 0 1.22083e+08 0.0450682 3.31608e+06 1.23256e+08 1.25446e+07 24891 6.05713e+07 0 0.166066 0.990488 0.780964 1.22083e+08 0.00493578 2.64042e+07 2.48269e+07 2.66922e+07 330 2.68636e+07 1.49446e+07 0.0036868 2.67341e+07 49.8792 0.0269041 0.995141 0 50.2712 GTEX-11ZTS-0011-R1a-SM-5BC71 B1, A1 7.9 Brain Brain - Hippocampus 0001954 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.980507 484076 0.959334 0.984976 0.834747 22357 1 76 0.0030091 200 0 6.99234e+07 0.040398 6.30754e+06 7.099e+07 1.96601e+07 22372 3.46804e+07 0 0.124588 0.984976 0.822205 6.99234e+07 0.00530397 1.52905e+07 1.94615e+07 1.55459e+07 213 1.53509e+07 7.01323e+06 0.00415133 1.57631e+07 50.6623 0.088851 0.989444 0 50.4142 GTEX-11ZTS-0011-R2b-SM-5BC75 B1, A1 7.6 Brain Brain - Substantia nigra 0002038 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986252 513489 0.959482 0.99105 0.816296 23235 1 76 0.00276011 204 0 7.05541e+07 0.0402485 5.53526e+06 7.11913e+07 2.03904e+07 23252 3.50204e+07 0 0.143186 0.99105 0.80899 7.05541e+07 0.00515433 1.54808e+07 1.87249e+07 1.55105e+07 207 1.53734e+07 7.27319e+06 0.00395142 1.5945e+07 50.9125 0.0777519 0.995847 0 50.0481 GTEX-11ZTS-0011-R3a-SM-5BC78 B1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 608 BP-43229 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986623 361167 0.972562 0.991388 0.842209 21367 1 76 0.0028033 177 0 6.27066e+07 0.0272342 7.05479e+06 6.32513e+07 1.59574e+07 21377 3.11182e+07 0 0.130354 0.991388 0.834956 6.27066e+07 0.00551912 1.38239e+07 2.3731e+07 1.37064e+07 208 1.33604e+07 4.35851e+06 0.00415468 1.44407e+07 51.943 0.111536 0.996154 0 49.7867 GTEX-11ZTS-0011-R8a-SM-57WDI B1, A1 6.3 Brain Brain - Hypothalamus 0001898 608 BP-43316 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989389 491553 0.964383 0.992278 0.82874 22347 1 76 0.00207404 266 0 7.22541e+07 0.035479 7.37336e+06 7.28163e+07 8.93076e+06 22360 3.59448e+07 0 0.135643 0.992278 0.82234 7.22541e+07 0.00399031 1.57791e+07 2.8129e+07 1.58308e+07 291 1.55598e+07 4.75775e+06 0.00302938 1.62165e+07 51.0333 0.10126 0.995168 0 50.0817 GTEX-11ZTS-0011-R9b-SM-DO93Q B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 608 BP-43067 RNA isolation_PAXgene Tissue miRNA 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995012 505094 0.964025 0.995691 0.843947 23150 1 76 0.00195657 387 0 9.2809e+07 0.0357268 7.0473e+06 9.32106e+07 5.63997e+06 23175 4.62655e+07 0 0.120078 0.995691 0.840311 9.2809e+07 0.00252176 2.04259e+07 1.66554e+07 2.09432e+07 343 2.0642e+07 9.73089e+06 0.00223897 2.07848e+07 50.1724 0.0756062 0.99637 0 50.6251 GTEX-11ZTS-0126-SM-5EQ6M 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 599 866 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991553 319585 0.969083 0.993543 0.789386 23415 1 76 0.00203634 198 0 7.40594e+07 0.0307039 586570 7.45407e+07 8.65234e+06 23442 3.68691e+07 0 0.179696 0.993543 0.784289 7.40594e+07 0.00303851 1.60763e+07 1.02519e+07 1.61965e+07 185 1.6155e+07 1.1338e+07 0.00253642 1.62555e+07 50.155 0.00786912 0.995532 0 50.1863 GTEX-11ZTS-0226-SM-5EQKD 0 B1 2 pieces, ~10% fibrovascular tissue, delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 600 865 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.98677 254690 0.974592 0.988943 0.786797 23309 1 76 0.00212491 166 0 7.39509e+07 0.0251206 433421 7.47777e+07 9.29407e+06 23341 3.68029e+07 0 0.187795 0.988943 0.778097 7.39509e+07 0.00317814 1.63316e+07 7.60531e+06 1.64e+07 176 1.63942e+07 1.21186e+07 0.00265037 1.64922e+07 50.1489 0.00579612 0.991116 0 50.1045 GTEX-11ZTS-0326-SM-5EQKP 0 B1 2 pieces adherent fascia/connective tissue up to ~0.7mm, delineated 7.2 Blood Vessel Artery - Tibial 0007610 602 863 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990923 186000 0.976709 0.993222 0.809635 21787 1 76 0.00205062 143 0 6.64533e+07 0.0229099 358257 6.69068e+07 8.42878e+06 21806 3.30541e+07 0 0.167074 0.993222 0.804147 6.64533e+07 0.00336448 1.43783e+07 5.36606e+06 1.4489e+07 154 1.44719e+07 1.20969e+07 0.00270603 1.45449e+07 50.1258 0.00535456 0.995521 0 50.1918 GTEX-11ZTS-0526-SM-5CVL9 0 B1 2 pieces, ~35% adherent, interstitial fat, focally delineated 7.2 Muscle Muscle - Skeletal 0011907 605 860 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98816 211477 0.984048 0.991845 0.856777 19505 1 76 0.00462499 123 0 7.22772e+07 0.0157211 1.03345e+06 7.28714e+07 1.40735e+07 19522 3.58999e+07 0 0.127271 0.991845 0.84979 7.22772e+07 0.00672081 1.59168e+07 1.02698e+07 1.57705e+07 155 1.57733e+07 1.33193e+07 0.00566901 1.61488e+07 50.5882 0.0141818 0.995531 0 49.7692 GTEX-11ZTS-0826-SM-5EQ49 1 B1 6 pieces, minimal atherosis, adherent serosa ~0.5mm thick 7.6 Blood Vessel Artery - Aorta 0001496 634 831 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991259 286270 0.974225 0.993473 0.787006 22564 1 76 0.0020243 164 0 7.8193e+07 0.0253177 218751 7.87068e+07 9.59407e+06 22595 3.8885e+07 0 0.187219 0.993473 0.781869 7.8193e+07 0.00297161 1.68405e+07 7.01915e+06 1.69934e+07 176 1.69852e+07 1.42178e+07 0.0024969 1.70167e+07 50.0463 0.00277932 0.995687 0 50.2259 GTEX-11ZTS-1026-SM-5LU8O 1 B1 2 pieces, one is artery, ~30% atherotic occlusion; other is fibrous tissue, delineated by X 6.5 Blood Vessel Artery - Coronary 0001621 645 820 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989685 325061 0.972272 0.991717 0.781589 22930 1 76 0.00462497 145 0 7.30479e+07 0.0273688 440402 7.36581e+07 5.97964e+06 22950 3.62832e+07 0 0.190683 0.991717 0.775115 7.30479e+07 0.00384043 1.56811e+07 6.58766e+06 1.57637e+07 156 1.57465e+07 1.21359e+07 0.00423351 1.58441e+07 50.1545 0.00597901 0.993749 0 50.1314 GTEX-11ZTS-1126-SM-5LU9X 1 B1 2 pieces, nodular goiter, regresive changes 5.9 Thyroid Thyroid 0002046 648 817 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989233 235987 0.963158 0.991005 0.701047 24037 1 76 0.00470783 114 0 6.25006e+07 0.0365737 837303 6.30679e+07 5.4592e+06 24069 3.10699e+07 0 0.262111 0.991005 0.694741 6.25006e+07 0.00384942 1.3667e+07 8.11325e+06 1.37455e+07 133 1.37349e+07 6.69681e+06 0.0042794 1.37853e+07 50.0916 0.0132762 0.992776 0 50.1432 GTEX-11ZTS-1226-SM-5EQMQ 1 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 650 815 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990733 193226 0.975383 0.992533 0.745888 23327 1 76 0.002414 159 0 7.56458e+07 0.02401 375337 7.62149e+07 9.79847e+06 23367 3.76489e+07 0 0.229495 0.992533 0.740318 7.56458e+07 0.00328972 1.67704e+07 7.1058e+06 1.68661e+07 168 1.68662e+07 1.18647e+07 0.00285107 1.69036e+07 50.0555 0.00492472 0.994334 0 50.1422 GTEX-11ZTS-1326-SM-5EQMA 1 B1 2 pieces, good specimens 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 651 814 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990148 226787 0.973579 0.992752 0.756692 23686 1 76 0.00216247 142 0 7.02517e+07 0.0261123 361572 7.07646e+07 8.56674e+06 23717 3.49332e+07 0 0.216886 0.992752 0.751208 7.02517e+07 0.00337976 1.55174e+07 7.33355e+06 1.55487e+07 163 1.55472e+07 1.05156e+07 0.00276952 1.5696e+07 50.2382 0.0051095 0.995355 0 50.0503 GTEX-11ZTS-1426-SM-5EQMM 1 B1 2 pieces, moderate congestion, minimal steatosis 6.1 Liver Liver 0001114 659 806 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992001 387390 0.973913 0.993968 0.792814 22625 1 76 0.00214653 372 0 1.27707e+08 0.0259616 2.42075e+06 1.28482e+08 1.6934e+07 22656 6.36025e+07 0 0.181099 0.993968 0.788031 1.27707e+08 0.00305413 2.8072e+07 3.05988e+07 2.79e+07 338 2.78364e+07 1.42788e+07 0.00259943 2.8369e+07 50.4738 0.0188412 0.995934 0 49.8463 GTEX-11ZTS-1526-SM-5N9G7 1 B1 6 pieces, all muscularis, good specimens 5.7 Colon Colon - Sigmoid 0001159 663 802 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989608 295216 0.968393 0.990917 0.767853 23612 1 76 0.00403485 270 0 9.39032e+07 0.0314394 1.4729e+06 9.47639e+07 4.87279e+06 23645 4.6682e+07 0 0.20054 0.990917 0.760879 9.39032e+07 0.00407723 2.02233e+07 8.82543e+06 2.03349e+07 261 2.02728e+07 1.23784e+07 0.00405601 2.04048e+07 50.1622 0.0155429 0.992226 0 50.1376 GTEX-11ZTS-1926-SM-5CVLA 1 B1 2 pieces,typical regressive/post menopausal atrophic changes 6.4 Ovary Ovary 0000992 683 782 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986617 465277 0.955118 0.990458 0.766514 23572 1 76 0.00476292 136 0 7.16113e+07 0.0446031 92370 7.23012e+07 1.34708e+07 23597 3.55356e+07 0 0.188604 0.990458 0.7592 7.16113e+07 0.00682339 1.53161e+07 1.85499e+07 1.55466e+07 138 1.5601e+07 1.35044e+07 0.00578916 1.55284e+07 49.8834 0.00127757 0.9943 0 50.3735 GTEX-11ZTS-2326-SM-5EQMY 2 B1 2 piecesm inactive endometrium/autolyzing glands, delineated. Focal adenomyosis 5.8 Uterus Uterus 0000995 701 764 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988733 302209 0.963653 0.990708 0.695277 23773 1 76 0.0022519 145 0 7.27884e+07 0.0361089 207151 7.34711e+07 8.94059e+06 23817 3.61977e+07 0 0.268376 0.990708 0.688816 7.27884e+07 0.00343199 1.58514e+07 7.44628e+06 1.59734e+07 155 1.59389e+07 9.94811e+06 0.00284077 1.60279e+07 50.1392 0.00281949 0.992683 0 50.1916 GTEX-11ZTS-2626-SM-5EGIC 1 B1 6 pieces, squamous mucosa is ~10% thickness 7.3 Esophagus Esophagus - Mucosa 0006920 707 758 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98598 208582 0.975033 0.99028 0.800069 21111 1 76 0.00245599 114 0 5.52811e+07 0.0247047 505021 5.58237e+07 8.10974e+06 21123 2.74522e+07 0 0.174964 0.99028 0.792293 5.52811e+07 0.00548752 1.24204e+07 7.39966e+06 1.25018e+07 131 1.25461e+07 8.48133e+06 0.00396517 1.26071e+07 50.1211 0.00904671 0.994579 0 50.1633 GTEX-11ZTS-2726-SM-5EQLU 1 B1 6 pieces, all muscularis 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 709 756 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987666 260374 0.971723 0.990477 0.785007 22408 1 76 0.00225423 143 0 6.47745e+07 0.0280966 1.75851e+06 6.53972e+07 8.87096e+06 22431 3.219e+07 0 0.186716 0.990477 0.777531 6.47745e+07 0.00354658 1.41844e+07 6.7545e+06 1.42754e+07 171 1.42118e+07 7.30208e+06 0.00289857 1.44213e+07 50.3658 0.0268897 0.993288 0 50.1598 GTEX-11ZTS-3026-SM-5EQM7 1 B1 2 pieces, ~30% glandular tissue (delineated), rest is squamous mucosa/stroma, LDCACC beware of blind sampling. 8.5 Salivary Gland Minor Salivary Gland 0006330 719 746 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989946 235501 0.976255 0.992398 0.79804 22445 1 76 0.00233896 142 0 6.91741e+07 0.023243 255826 6.9704e+07 8.99942e+06 22467 3.44243e+07 0 0.178215 0.992398 0.791973 6.91741e+07 0.00336136 1.56544e+07 1.04803e+07 1.57374e+07 150 1.57728e+07 1.32131e+07 0.0028489 1.57841e+07 50.0178 0.00367018 0.99485 0 50.1322 GTEX-11ZTS-3226-SM-5EGID 1 B1 2 pieces no abnormalities, Purkinje cells well seen, nuclei distinct, not significant ischemic change 6.1 Brain Brain - Cerebellum 0002037 776 689 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.978544 309605 0.946664 0.985109 0.725701 23775 1 76 0.00268782 154 0 7.23327e+07 0.0530845 1.82761e+06 7.34261e+07 1.31007e+07 23805 3.58239e+07 0 0.220963 0.985109 0.714895 7.23327e+07 0.00618315 1.56049e+07 2.13108e+07 1.56723e+07 174 1.57734e+07 7.01553e+06 0.00442384 1.59297e+07 50.2465 0.0248905 0.991673 0 50.1079 GTEX-11ZTS-3326-SM-5LU9Y 1 B1 1 piece, 6 mm portion of neurohypophysis delineated; 60% is adenohypophysis, ensquared; rest is dura 7 Pituitary Pituitary 0000007 782 683 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99054 305582 0.96398 0.992658 0.743735 24546 1 76 0.00458576 121 0 6.1469e+07 0.0357989 496315 6.19236e+07 5.12038e+06 24577 3.05566e+07 0 0.220246 0.992658 0.738274 6.1469e+07 0.00402317 1.27011e+07 7.47638e+06 1.27533e+07 134 1.27578e+07 8.66456e+06 0.00430507 1.28237e+07 50.1287 0.00801496 0.994777 0 50.1024 GTEX-11ZTT-0002-SM-5S2PA B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -15 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993153 524598 0.955072 0.994202 0.840539 19011 1 76 0.0019009 141 0 5.62036e+07 0.0443333 387322 5.65313e+07 2.9246e+06 19024 2.79851e+07 0 0.114533 0.994202 0.835666 5.62036e+07 0.00267683 1.22074e+07 1.65583e+07 1.23996e+07 137 1.23283e+07 1.16816e+07 0.00228845 1.23574e+07 50.0591 0.00685146 0.995251 0 50.3906 GTEX-11ZTT-0003-SM-58Q8I B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZTT-0003-SM-5DWTB B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZTT-0003-SM-6WBU4 B1 Blood Whole Blood 0013756 -15 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZTT-0006-SM-5N9FX B1 8.7 Blood Whole Blood 0013756 -15 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.977511 611062 0.971612 0.979133 0.814461 18509 1 76 0.00444365 123 0 9.47854e+07 0.0274473 207573 9.68055e+07 4.58425e+06 18515 4.71159e+07 0 0.157151 0.979133 0.797466 9.47854e+07 0.00444944 2.17078e+07 1.00847e+08 2.20082e+07 158 2.20288e+07 2.41697e+07 0.00444654 2.18502e+07 49.7965 0.00214423 0.980755 0 50.3435 GTEX-11ZTT-0008-SM-5S2TZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993643 508782 0.975384 0.995347 0.875641 20423 1 76 0.00167132 279 0 9.99831e+07 0.0243435 617633 1.00451e+08 9.94938e+06 20440 4.98235e+07 0 0.0997422 0.995347 0.871567 9.99831e+07 0.0024518 2.21592e+07 1.74368e+07 2.22966e+07 282 2.22859e+07 2.43356e+07 0.00206089 2.23451e+07 50.0664 0.00614863 0.997051 0 50.1545 GTEX-11ZTT-0426-SM-5EQLK 1 B1 2 pieces, calcific atherosclerosis 8 Blood Vessel Artery - Coronary 0001621 167 1156 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991786 239353 0.974919 0.993647 0.839506 22733 1 76 0.00205267 163 0 7.36359e+07 0.0246763 405730 7.41068e+07 9.62905e+06 22747 3.66647e+07 0 0.135413 0.993647 0.834173 7.36359e+07 0.00310035 1.59877e+07 6.29561e+06 1.60991e+07 178 1.60339e+07 1.3901e+07 0.00257553 1.61836e+07 50.2322 0.00547494 0.995508 0 50.1736 GTEX-11ZTT-0526-SM-5EQLA 1 B1 2 pieces, each ~50-60% fat/fibrous tissue 6.9 Heart Heart - Atrial Appendage 0006631 168 1155 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990398 285526 0.978687 0.992796 0.82319 21973 1 76 0.00215572 267 0 8.48163e+07 0.0210429 1.77989e+06 8.54318e+07 1.22182e+07 21990 4.22255e+07 0 0.155497 0.992796 0.817259 8.48163e+07 0.00303929 1.79903e+07 2.01287e+07 1.77311e+07 258 1.76251e+07 1.34359e+07 0.00259644 1.82873e+07 50.922 0.0208341 0.995194 0 49.6372 GTEX-11ZTT-0626-SM-5EQLM 0 B1 2 pieces, includes pleura (target is 1 cm below pleura), some fibrosis, atelectasis, and emphysematous change, scattered neutrophils 6.3 Lung Lung 0008952 172 1151 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991861 297989 0.969782 0.993673 0.786761 25195 1 76 0.00225279 206 0 8.47294e+07 0.0297344 442690 8.52689e+07 1.04675e+07 25231 4.21881e+07 0 0.183021 0.993673 0.781782 8.47294e+07 0.0031886 1.86183e+07 8.32536e+06 1.87421e+07 222 1.87106e+07 1.48622e+07 0.00271984 1.87931e+07 50.1099 0.00519169 0.995484 0 50.1658 GTEX-11ZTT-0926-SM-5EQMS 0 B1 6 pieces 8 Esophagus Esophagus - Muscularis 0004648 180 1143 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991127 253357 0.975065 0.99318 0.82617 22145 1 76 0.00209523 166 0 7.47809e+07 0.0246655 578318 7.52944e+07 9.85323e+06 22158 3.7232e+07 0 0.148895 0.99318 0.820536 7.47809e+07 0.00307545 1.61474e+07 7.2293e+06 1.62276e+07 187 1.61734e+07 1.27896e+07 0.00258433 1.63511e+07 50.2731 0.00768075 0.995234 0 50.1238 GTEX-11ZTT-1026-SM-5EQKF 2 B1 2 pieces, one piece is ~30% fibrous tissue and large vessels 7.5 Thyroid Thyroid 0002046 183 1140 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992092 228146 0.971229 0.993822 0.769946 22979 1 76 0.00209594 161 0 7.41835e+07 0.0285152 385991 7.46447e+07 8.84465e+06 23008 3.69524e+07 0 0.201283 0.993822 0.765189 7.41835e+07 0.00300662 1.63118e+07 7.77292e+06 1.63928e+07 168 1.63636e+07 1.2313e+07 0.00255048 1.64563e+07 50.1413 0.00517104 0.995551 0 50.1238 GTEX-11ZTT-1626-SM-5EQKR 1 B1 6 pieces, 2 pieces include mucosa (not target) 8.2 Colon Colon - Sigmoid 0001159 206 1117 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992696 159528 0.977351 0.994387 0.843038 20693 1 76 0.0020114 121 0 5.33208e+07 0.0223381 456858 5.36217e+07 6.55372e+06 20703 2.65612e+07 0 0.134313 0.994387 0.838306 5.33208e+07 0.00291844 1.15375e+07 4.70686e+06 1.1568e+07 127 1.15304e+07 9.8588e+06 0.00246414 1.16624e+07 50.2845 0.00852001 0.996078 0 50.0659 GTEX-11ZTT-1726-SM-5EQL4 1 B1 2 pieces, myometrium, some vascular calcification 7.9 Uterus Uterus 0000995 204 1119 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991438 235939 0.969434 0.993355 0.776983 23606 1 76 0.00215228 163 0 7.4441e+07 0.0302535 324966 7.49389e+07 9.35912e+06 23640 3.70651e+07 0 0.192451 0.993355 0.77182 7.4441e+07 0.00315566 1.6191e+07 7.21265e+06 1.62602e+07 167 1.62414e+07 1.28169e+07 0.002653 1.63449e+07 50.1589 0.00433641 0.995273 0 50.1067 GTEX-11ZTT-1826-SM-5CVLN 1 B1 2 pieces, several corpora albicantia, hilus with numerous vessels, rete ovarii 6.6 Ovary Ovary 0000992 207 1116 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986413 205901 0.970933 0.990228 0.762865 22848 1 76 0.00491417 121 0 6.35354e+07 0.0288204 174791 6.41624e+07 1.19529e+07 22877 3.15341e+07 0 0.208068 0.990228 0.755411 6.35354e+07 0.00671176 1.3998e+07 7.06756e+06 1.40648e+07 127 1.41138e+07 1.01712e+07 0.0058095 1.41783e+07 50.114 0.0027242 0.994044 0 50.119 GTEX-11ZTT-2126-SM-5CVLO 1 B1 6 pieces, some with attached and internal fat from 10-20% 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 227 1096 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.981791 188969 0.973831 0.98784 0.809191 22659 1 76 0.00490748 153 0 6.08985e+07 0.0259756 529576 6.16481e+07 1.24444e+07 22674 3.01587e+07 0 0.16464 0.98784 0.799352 6.08985e+07 0.00792356 1.33019e+07 7.3157e+06 1.3397e+07 131 1.34661e+07 9.95343e+06 0.00640628 1.35829e+07 50.2159 0.0085903 0.993889 0 50.178 GTEX-11ZTT-2226-SM-5CVLP 0 B1 4 pieces, very good specimen, small attachment of stroma and skeletal muscle 7.3 Salivary Gland Minor Salivary Gland 0006330 234 1089 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983967 242389 0.97166 0.986907 0.796288 25114 1 76 0.0054002 178 0 7.87905e+07 0.0267754 295827 7.98358e+07 1.30345e+07 25140 3.90855e+07 0 0.175372 0.986907 0.785862 7.87905e+07 0.00704905 1.77143e+07 2.08694e+07 1.76919e+07 174 1.77386e+07 1.27289e+07 0.00622217 1.7889e+07 50.2111 0.00370544 0.989846 0 49.9683 GTEX-11ZTT-2326-SM-5EQLG 1 B1 2 pieces, fat only 7.1 Breast Breast - Mammary Tissue 0008367 236 1087 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991808 206434 0.9782 0.993808 0.832401 20959 1 76 0.00217747 141 0 6.18391e+07 0.0215372 533015 6.22244e+07 7.71595e+06 20976 3.07928e+07 0 0.145799 0.993808 0.827247 6.18391e+07 0.00323152 1.38014e+07 6.38552e+06 1.3745e+07 157 1.37387e+07 9.82064e+06 0.00270343 1.39211e+07 50.3297 0.00856602 0.995809 0 49.8975 GTEX-11ZTT-2426-SM-5EQLS 1 B1 6 pieces, all contain residual attached adipose tissue from 10-30%, squamous epithelium measures 30-40 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 247 1076 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991509 181215 0.972468 0.993562 0.797032 22850 1 76 0.00218125 144 0 5.9208e+07 0.027301 304936 5.95917e+07 7.3155e+06 22871 2.94797e+07 0 0.175436 0.993562 0.791901 5.9208e+07 0.00333601 1.29888e+07 5.98261e+06 1.3056e+07 140 1.30462e+07 9.99295e+06 0.00275744 1.31139e+07 50.1294 0.00511709 0.995614 0 50.129 GTEX-11ZTT-2526-SM-5EQM9 1 B1 2 pieces, <10% is fibrous/vascular 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 249 1074 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988512 331539 0.976964 0.991154 0.821037 22783 1 76 0.0021843 205 0 8.30186e+07 0.0227558 499187 8.37596e+07 1.04991e+07 22808 4.12959e+07 0 0.155927 0.991154 0.813774 8.30186e+07 0.00347504 1.83171e+07 8.36498e+06 1.84277e+07 213 1.84042e+07 1.38961e+07 0.00282795 1.85504e+07 50.1979 0.00595976 0.993796 0 50.1505 GTEX-11ZTT-2626-SM-5EQKK 1 B1 2 pieces, both include attached fat (20 and 50%) 8.2 Muscle Muscle - Skeletal 0011907 256 1067 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992459 230940 0.981458 0.99438 0.869645 20081 1 76 0.00205067 206 0 8.0608e+07 0.0183178 1.26231e+06 8.10636e+07 1.05899e+07 20090 4.01575e+07 0 0.111813 0.99438 0.864758 8.0608e+07 0.0029683 1.77049e+07 1.21242e+07 1.76815e+07 246 1.76119e+07 1.52073e+07 0.0025086 1.79235e+07 50.4385 0.0155718 0.9963 0 49.9668 GTEX-11ZTT-5001-SM-AN3YD B1 Heart Heart - Left Ventricle 0006566 165 ChIP-Seq GTEX-11ZU8-0001-SM-58Q8J B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZU8-0001-SM-5DWTC B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZU8-0001-SM-DLIPQ B1 Blood Whole Blood 0013756 592 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-11ZU8-0005-SM-5PNU5 B1 6.2 Blood Whole Blood 0013756 592 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.959896 127950 0.990429 0.961668 0.814633 15279 1 76 0.00202821 81 0 8.02607e+07 0.00789042 199250 8.34599e+07 8.86985e+06 15279 3.99064e+07 0 0.175796 0.961668 0.783407 8.02607e+07 0.00355864 1.92634e+07 1.49175e+08 1.96148e+07 115 1.96066e+07 2.33686e+07 0.00279202 1.94295e+07 49.7732 0.00238737 0.96344 0 50.452 GTEX-11ZU8-0008-SM-5S2VO B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1020 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992308 386088 0.975482 0.994471 0.862995 20195 1 76 0.00167715 166 0 8.20951e+07 0.0242561 497773 8.25515e+07 8.18552e+06 20206 4.08873e+07 0 0.112487 0.994471 0.858224 8.20951e+07 0.00256757 1.83869e+07 1.35311e+07 1.85134e+07 202 1.85194e+07 2.01888e+07 0.00212139 1.85622e+07 50.0577 0.00602984 0.996635 0 50.1715 GTEX-11ZU8-0011-R3a-SM-5BC6U B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 781 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.986333 519848 0.953185 0.991247 0.82765 21061 1 76 0.00255995 174 0 6.01831e+07 0.0465364 3.92407e+06 6.07145e+07 1.48428e+07 21074 2.98484e+07 0 0.125535 0.991247 0.820406 6.01831e+07 0.00527027 1.32069e+07 1.31673e+07 1.32674e+07 171 1.30806e+07 7.26639e+06 0.00390839 1.36953e+07 51.1478 0.0646315 0.996162 0 50.1142 GTEX-11ZU8-0011-R4a-SM-5BC6Y B1, A1 7.1 Brain Brain - Amygdala 0001876 781 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985879 350367 0.973688 0.991047 0.874097 19533 1 76 0.00283447 152 0 5.69819e+07 0.02615 8.24056e+06 5.74967e+07 1.44657e+07 19541 2.8266e+07 0 0.0995909 0.991047 0.866271 5.69819e+07 0.00547553 1.28748e+07 1.98319e+07 1.23738e+07 194 1.2199e+07 3.86149e+06 0.00414812 1.33202e+07 52.1968 0.143322 0.996214 0 49.0078 GTEX-11ZU8-0126-SM-5EQ58 0 B1 6 pieces, no dermal fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 806 640 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990888 187144 0.972982 0.993457 0.807814 21434 1 76 0.0020548 149 0 5.8784e+07 0.0267742 424039 5.91712e+07 7.47689e+06 21455 2.92418e+07 0 0.165168 0.993457 0.802528 5.8784e+07 0.00323327 1.29211e+07 7.41736e+06 1.29791e+07 144 1.29682e+07 9.6901e+06 0.00264252 1.30765e+07 50.208 0.00716631 0.996025 0 50.112 GTEX-11ZU8-1126-SM-5EQ5K 1 B1 6 pieces, all muscularis, good specimens 6.3 Colon Colon - Sigmoid 0001159 864 582 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99069 296736 0.973574 0.993337 0.822646 21536 1 76 0.00193381 144 0 6.60897e+07 0.0261501 186184 6.6533e+07 8.76689e+06 21555 3.28661e+07 0 0.150928 0.993337 0.817165 6.60897e+07 0.00311145 1.41025e+07 7.21172e+06 1.42508e+07 157 1.42372e+07 1.17637e+07 0.00252106 1.4284e+07 50.0821 0.00279837 0.995984 0 50.2616 GTEX-11ZU8-1526-SM-5EGHX 1 B1 6 pieces, squamous mucosa is ~5% thickness 6.4 Esophagus Esophagus - Mucosa 0006920 872 574 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983483 237398 0.973371 0.987904 0.753744 21218 1 76 0.00243407 119 0 5.78692e+07 0.0264248 584353 5.85778e+07 7.8127e+06 21239 2.87239e+07 0 0.219626 0.987904 0.744627 5.78692e+07 0.0057253 1.30715e+07 8.52619e+06 1.31009e+07 140 1.31258e+07 7.4218e+06 0.00407232 1.32981e+07 50.326 0.00997568 0.992325 0 50.056 GTEX-11ZU8-2326-SM-5EQMJ 0 B1 2 pieces ~30% interstitial fat, rep delineated 7.1 Muscle Muscle - Skeletal 0011907 1016 430 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991389 222612 0.978621 0.993707 0.842806 20697 1 76 0.00194699 136 0 6.55861e+07 0.0211339 722697 6.60015e+07 8.82968e+06 20711 3.26488e+07 0 0.135816 0.993707 0.837502 6.55861e+07 0.00296159 1.43153e+07 6.79739e+06 1.43929e+07 151 1.43879e+07 1.3232e+07 0.00245311 1.4461e+07 50.1266 0.0109497 0.996025 0 50.1352 GTEX-11ZU8-2426-SM-5EQMV 0 B1 2 pieces, ~5% fibrovascular tissue, rep delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1017 429 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989572 255445 0.974382 0.991969 0.767535 22663 1 76 0.00224081 134 0 6.41345e+07 0.0253583 411725 6.46537e+07 8.35465e+06 22690 3.19003e+07 0 0.206848 0.991969 0.761371 6.41345e+07 0.00347828 1.42308e+07 9.49449e+06 1.42317e+07 152 1.42204e+07 9.55449e+06 0.00285805 1.43893e+07 50.2951 0.00636816 0.994366 0 50.0016 GTEX-11ZU8-2526-SM-5EQKI 0 B1 6 pieces, minimal fat, sqaumous epithelium is ~50-60 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1020 426 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990729 382992 0.964483 0.993167 0.773038 23903 1 76 0.00212082 169 0 7.16968e+07 0.0352464 410191 7.21901e+07 8.3931e+06 23930 3.56726e+07 0 0.191445 0.993167 0.767756 7.16968e+07 0.00332669 1.55814e+07 1.29438e+07 1.57258e+07 161 1.57311e+07 1.2327e+07 0.00272228 1.57464e+07 50.0244 0.0056821 0.995605 0 50.2306 GTEX-11ZU8-2626-SM-5EQLL 0 B1 4 pieces, adherent nubbins of fat up to ~1mm, rep delineated 6.3 Nerve Nerve - Tibial 0001323 1022 424 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990458 218021 0.95857 0.992525 0.678404 24352 1 76 0.00231832 149 0 6.81524e+07 0.0412071 295041 6.86657e+07 9.11698e+06 24391 3.3911e+07 0 0.280167 0.992525 0.673332 6.81524e+07 0.00337972 1.48957e+07 7.99745e+06 1.49678e+07 147 1.49535e+07 8.25577e+06 0.00284791 1.50442e+07 50.1512 0.00429677 0.994591 0 50.1207 GTEX-11ZUS-0003-SM-58Q8H C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZUS-0003-SM-5DWTA C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-11ZUS-0003-SM-6WBU3 C1 Blood Whole Blood 0013756 1222 BP-40422 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZUS-0006-SM-5O9AJ C1 7.7 Blood Whole Blood 0013756 1222 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.984866 507455 0.961125 0.989556 0.675791 21075 1 76 0.0028118 117 0 6.26079e+07 0.0383403 188118 6.32686e+07 7.95726e+06 21102 3.10379e+07 0 0.285334 0.989556 0.668733 6.26079e+07 0.00466644 1.37591e+07 2.85719e+07 1.39588e+07 122 1.40533e+07 9.86101e+06 0.00373472 1.39657e+07 49.8436 0.00297332 0.994247 0 50.3602 GTEX-11ZUS-0008-SM-5S2UO C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1360 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993823 406664 0.978361 0.995388 0.87638 20044 1 76 0.00163396 281 0 9.50372e+07 0.0213591 387068 9.54776e+07 1.01611e+07 20062 4.7369e+07 0 0.101982 0.995388 0.872338 9.50372e+07 0.00231226 2.12263e+07 1.43168e+07 2.13519e+07 267 2.13444e+07 2.3397e+07 0.00197258 2.1381e+07 50.0428 0.00405402 0.996953 0 50.1476 GTEX-11ZUS-0011-R10a-SM-AHZMK C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1268 ChIP-Seq GTEX-11ZUS-0011-R10b-SM-5BC79 C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.988539 442951 0.970153 0.992629 0.858514 23022 1 76 0.00253596 197 0 6.86541e+07 0.0294305 3.69532e+06 6.91639e+07 1.97164e+07 23037 3.4106e+07 0 0.11164 0.992629 0.852185 6.86541e+07 0.00473025 1.51731e+07 1.84192e+07 1.5112e+07 220 1.50482e+07 8.09378e+06 0.00362858 1.54785e+07 50.7049 0.0534285 0.996719 0 49.8992 GTEX-11ZUS-0011-R10b-SM-CYKOY C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 RIP-Seq GTEX-11ZUS-0011-R11b-SM-5BC7B C1, A1 9.1 Brain Brain - Cerebellar Hemisphere 0002037 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985635 642645 0.951202 0.99057 0.802755 22412 1 76 0.00268827 134 0 6.52203e+07 0.0482235 913333 6.58411e+07 1.82996e+07 22430 3.23491e+07 0 0.148447 0.99057 0.795185 6.52203e+07 0.00474232 1.40055e+07 1.41224e+07 1.41599e+07 155 1.42673e+07 9.89643e+06 0.00371017 1.42023e+07 49.8859 0.0138718 0.995506 0 50.2742 GTEX-11ZUS-0011-R8a-SM-5BC73 C1, A1 8.8 Brain Brain - Hypothalamus 0001898 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988562 727455 0.957914 0.992779 0.868339 21878 1 76 0.00239105 151 0 6.06549e+07 0.041556 2.29329e+06 6.10961e+07 1.5209e+07 21889 3.01124e+07 0 0.0895756 0.992779 0.862068 6.06549e+07 0.00461138 1.33215e+07 1.5994e+07 1.32687e+07 170 1.32856e+07 8.75163e+06 0.0034965 1.35586e+07 50.5085 0.0375358 0.996995 0 49.9007 GTEX-11ZUS-0011-R9b-SM-5BC76 C1, A1 8.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1268 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988502 654866 0.953291 0.992419 0.828943 22797 1 76 0.00239963 211 0 7.08106e+07 0.0463913 3.20875e+06 7.13516e+07 1.57757e+07 22811 3.51638e+07 0 0.124348 0.992419 0.822658 7.08106e+07 0.00471601 1.55481e+07 1.58703e+07 1.57147e+07 211 1.55348e+07 8.59532e+06 0.00355325 1.59971e+07 50.7331 0.044971 0.996335 0 50.2665 GTEX-11ZUS-0126-SM-5EQM5 1 C1 2 pieces, alveolar hemorrhage, edema, emphysematous change 6.5 Lung Lung 0008952 1345 1141 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.987882 182602 0.968504 0.990877 0.711713 24229 1 76 0.00251873 120 0 6.06171e+07 0.0308991 309807 6.11752e+07 8.54221e+06 24265 3.01244e+07 0 0.256792 0.990877 0.70522 6.06171e+07 0.00356281 1.33028e+07 6.46158e+06 1.33841e+07 129 1.34087e+07 8.73335e+06 0.00303919 1.3451e+07 50.0788 0.00506426 0.993872 0 50.1525 GTEX-11ZUS-0126-SM-CYKR8 1 C1 2 pieces, alveolar hemorrhage, edema, emphysematous change 6.5 Lung Lung 0008952 1345 1141 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 RIP-Seq GTEX-11ZUS-0226-SM-5FQT8 1 C1 2 pieces 7.6 Heart Heart - Left Ventricle 0006566 1347 1140 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988997 235616 0.982898 0.992953 0.861027 20512 1 76 0.00206404 151 0 6.63584e+07 0.016865 1.91524e+06 6.68293e+07 9.48516e+06 20521 3.29804e+07 0 0.121871 0.992953 0.85496 6.63584e+07 0.00379301 1.47794e+07 1.07625e+07 1.45529e+07 171 1.46418e+07 1.17273e+07 0.00292508 1.49354e+07 50.4963 0.0286587 0.996909 0 49.6139 GTEX-11ZUS-0326-SM-5EQ4W 1 C1 2 pieces 6.8 Heart Heart - Atrial Appendage 0006631 1349 1138 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989291 254717 0.973021 0.99278 0.810797 22275 1 76 0.00187773 143 0 6.11532e+07 0.0267869 1.7371e+06 6.1598e+07 6.90914e+06 22290 3.03874e+07 0 0.162224 0.99278 0.804942 6.11532e+07 0.00324882 1.33743e+07 1.04709e+07 1.32213e+07 169 1.31983e+07 7.60246e+06 0.00256087 1.35966e+07 50.7432 0.0282005 0.996268 0 49.7124 GTEX-11ZUS-0526-SM-59884 1 C1 2 pieces, abundant attached fat (80-90%) 6.8 Blood Vessel Artery - Coronary 0001621 1356 1133 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.979372 192811 0.970426 0.984081 0.791033 23358 1 76 0.0027697 134 0 6.32379e+07 0.029253 797142 6.42609e+07 1.3565e+07 23381 3.13689e+07 0 0.179393 0.984081 0.778441 6.32379e+07 0.00651506 1.3802e+07 1.05966e+07 1.38405e+07 148 1.38936e+07 9.56533e+06 0.00463342 1.40352e+07 50.2535 0.0124048 0.988789 0 50.0696 GTEX-11ZUS-0626-SM-59885 1 C1 6 pieces, 5 of 6 do not show squamous epithelium (? embedding) 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1359 1131 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.981623 1.75757e+06 0.896344 0.986279 0.696736 24340 1 76 0.00267445 134 0 7.33408e+07 0.103218 737805 7.43611e+07 1.62823e+07 24366 3.64087e+07 0 0.199608 0.986279 0.687176 7.33408e+07 0.00633601 1.48646e+07 7.72787e+07 1.50709e+07 141 1.51707e+07 1.06756e+07 0.00449659 1.50946e+07 49.8743 0.00992193 0.990935 0 50.3446 GTEX-11ZUS-0726-SM-59886 1 C1 2 pieces, one is ~20% nerve and vessels 6 Adipose Tissue Adipose - Subcutaneous 0002190 1361 1129 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983177 241500 0.973481 0.988461 0.799824 23394 1 76 0.00271285 142 0 7.31161e+07 0.0261819 344408 7.39696e+07 1.64706e+07 23421 3.62767e+07 0 0.173657 0.988461 0.790595 7.31161e+07 0.00668646 1.59101e+07 8.91500e+06 1.59465e+07 162 1.60572e+07 1.20304e+07 0.00468903 1.61541e+07 50.1504 0.00465607 0.993745 0 50.0571 GTEX-11ZUS-0826-SM-5FQUY 1 C1 2 pieces, predominantly fat, scant stroma and vessels 6.6 Breast Breast - Mammary Tissue 0008367 1363 1128 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988389 224200 0.973469 0.991737 0.808561 22683 1 76 0.00232746 139 0 6.7028e+07 0.0262198 324534 6.75864e+07 9.78732e+06 22707 3.33198e+07 0 0.164909 0.991737 0.80188 6.7028e+07 0.00370938 1.46935e+07 8.29478e+06 1.4747e+07 164 1.47598e+07 1.07295e+07 0.00301609 1.4895e+07 50.228 0.00480176 0.995086 0 50.0908 GTEX-11ZUS-0926-SM-5FQSY 1 C1 6 pieces, well trimmed 6 Esophagus Esophagus - Muscularis 0004648 1365 1126 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.985734 350543 0.968113 0.989892 0.801318 24522 1 76 0.00227949 371 0 1.04048e+08 0.0316759 1.76691e+06 1.05111e+08 1.42142e+07 24553 5.16397e+07 0 0.166795 0.989892 0.793218 1.04048e+08 0.004062 2.25825e+07 1.18282e+07 2.25755e+07 352 2.25805e+07 1.27594e+07 0.003167 2.29724e+07 50.4301 0.01681 0.99405 0 49.9923 GTEX-11ZUS-1226-SM-5FQU8 0 C1 2 pieces, well trimmed 7.4 Nerve Nerve - Tibial 0001323 1378 1116 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987844 270869 0.96576 0.991336 0.745752 24892 1 76 0.00237989 224 0 8.50857e+07 0.0338953 251959 8.58292e+07 1.21334e+07 24934 4.22891e+07 0 0.220009 0.991336 0.739291 8.50857e+07 0.00352822 1.86482e+07 8.78727e+06 1.8758e+07 210 1.8837e+07 1.36161e+07 0.00295203 1.88487e+07 50.0155 0.00293558 0.994829 0 50.1468 GTEX-11ZUS-1326-SM-5FQUC 1 C1 2 pieces, well trimmed 7.6 Blood Vessel Artery - Tibial 0007610 1380 1114 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989299 258647 0.972284 0.992702 0.836996 21389 1 76 0.00214731 163 0 7.65857e+07 0.0273745 318220 7.71488e+07 1.05234e+07 21404 3.80691e+07 0 0.135287 0.992702 0.830888 7.65857e+07 0.00353372 1.61516e+07 6.84447e+06 1.62949e+07 193 1.63066e+07 1.42716e+07 0.00283814 1.6382e+07 50.1153 0.00412476 0.996104 0 50.2207 GTEX-11ZUS-1426-SM-5FQSP 1 C1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 1383 1114 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990287 197733 0.985153 0.993296 0.874763 19328 1 76 0.00192176 199 0 8.05681e+07 0.0145928 798238 8.11119e+07 1.20679e+07 19333 4.00945e+07 0 0.11039 0.993296 0.868899 8.05681e+07 0.00317759 1.75751e+07 1.32415e+07 1.73575e+07 241 1.73369e+07 1.66167e+07 0.00254778 1.78106e+07 50.6738 0.0098412 0.996305 0 49.6885 GTEX-11ZUS-1826-SM-5FQTR 0 C1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1407 1093 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989906 173585 0.976509 0.99277 0.805083 22694 1 76 0.00229984 133 0 6.08115e+07 0.0231547 339792 6.12544e+07 7.48046e+06 22712 3.02329e+07 0 0.171426 0.99277 0.799262 6.08115e+07 0.00387424 1.33344e+07 6.77480e+06 1.33541e+07 148 1.33501e+07 9.81674e+06 0.00308477 1.35069e+07 50.2919 0.00554722 0.995634 0 50.037 GTEX-11ZUS-2126-SM-5N9E6 2 C1 2 pieces, epithelium sloughing 5.7 Prostate Prostate 0002367 1413 1089 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98706 366744 0.960845 0.98858 0.785027 26371 1 76 0.00407377 373 0 1.09143e+08 0.038953 1.69134e+06 1.10404e+08 5.12152e+06 26420 5.42228e+07 0 0.175817 0.98858 0.776062 1.09143e+08 0.00413739 2.3661e+07 1.159e+07 2.37786e+07 331 2.36883e+07 1.36575e+07 0.00410553 2.39154e+07 50.2385 0.0153196 0.9901 0 50.1239 GTEX-11ZUS-2526-SM-59872 2 C1 2 pieces, mild to moderate steatosis 6.7 Liver Liver 0001114 1426 1079 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983699 197984 0.9744 0.987986 0.840057 20551 1 76 0.00253734 193 0 6.97845e+07 0.0255105 1.34824e+06 7.06331e+07 1.43908e+07 20563 3.46819e+07 0 0.134343 0.987986 0.829965 6.97845e+07 0.00611997 1.55883e+07 1.54298e+07 1.50738e+07 230 1.50441e+07 6.89559e+06 0.00432088 1.58585e+07 51.3177 0.0190879 0.992272 0 49.1611 GTEX-11ZUS-2626-SM-5FQUR 2 C1 6 pieces, few with minimal attached fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1433 1073 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988486 192384 0.972766 0.991557 0.768278 23933 1 76 0.00222389 161 0 7.53737e+07 0.0270064 756974 7.60156e+07 9.71444e+06 23965 3.74736e+07 0 0.204488 0.991557 0.761791 7.53737e+07 0.00386162 1.66681e+07 9.65602e+06 1.66574e+07 181 1.66409e+07 1.09985e+07 0.00304022 1.6905e+07 50.3937 0.00995814 0.994627 0 49.984 GTEX-11ZUS-2726-SM-5FQUA 1 C1 2 pieces, active spermatogenesis, rete testis 6.1 Testis Testis 0000473 1435 1072 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98766 427139 0.914374 0.990914 0.719145 34026 1 76 0.00226245 226 0 1.01365e+08 0.0852351 766232 1.02295e+08 1.47237e+07 34099 5.041e+07 0 0.195229 0.990914 0.712611 1.01365e+08 0.00343002 2.03879e+07 1.89572e+07 2.03849e+07 255 2.0483e+07 1.67154e+07 0.00284432 2.05825e+07 50.1212 0.00749044 0.994169 0 49.9963 GTEX-11ZUS-2826-SM-5EQKW 1 C1 4 pieces 6.7 Brain Brain - Cerebellum 0002037 1439 1068 BP-44312 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988697 439784 0.944118 0.991289 0.703568 25277 1 76 0.00234747 271 0 1.00297e+08 0.0555395 1.13582e+06 1.01178e+08 1.29858e+07 25319 4.98665e+07 0 0.24055 0.991289 0.697439 1.00297e+08 0.00342744 2.15587e+07 1.81873e+07 2.17508e+07 273 2.17838e+07 1.20287e+07 0.00288604 2.17683e+07 49.9821 0.0112259 0.993881 0 50.2217 GTEX-11ZUS-2926-SM-5FQSL 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 1440 1068 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989423 296284 0.965186 0.992657 0.833929 23290 1 76 0.00216225 267 0 7.39918e+07 0.0343922 2.41163e+06 7.45391e+07 1.06578e+07 23304 3.67935e+07 0 0.131257 0.992657 0.827805 7.39918e+07 0.00350537 1.62829e+07 1.62137e+07 1.6184e+07 259 1.61341e+07 8.69868e+06 0.00283163 1.65533e+07 50.6412 0.0323539 0.995891 0 49.8477 GTEX-11ZUS-3026-SM-5EGI4 2 C1 1 pieces 8.2 Pituitary Pituitary 0000007 1440 1068 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985461 228773 0.95916 0.990456 0.785039 24447 1 76 0.00238939 115 0 6.00371e+07 0.0405372 136089 6.06156e+07 1.00046e+07 24472 2.97959e+07 0 0.174121 0.990456 0.777547 6.00371e+07 0.00548983 1.28251e+07 8.69221e+06 1.29236e+07 133 1.30349e+07 1.02851e+07 0.0039318 1.29949e+07 49.923 0.00224512 0.995452 0 50.1914 GTEX-11ZVC-0004-SM-58Q8O B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-11ZVC-0004-SM-5DWTH B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-11ZVC-0004-SM-6WBU9 B1 Blood Whole Blood 0013756 469 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-11ZVC-0006-SM-5N9GA B1 8.8 Blood Whole Blood 0013756 469 BP-40461 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2013 LCSET-4905,LCSET-5337 04/10/2014 TruSeq.v1 RNASEQ 0.987832 710303 0.975784 0.988411 0.755668 21414 1 76 0.00219516 272 0 1.46456e+08 0.0235522 464813 1.48173e+08 7.20756e+06 21447 7.30091e+07 0 0.220116 0.988411 0.746911 1.46456e+08 0.00274937 3.32513e+07 9.15969e+07 3.3211e+07 313 3.31718e+07 3.01296e+07 0.00247211 3.33933e+07 50.1664 0.00313696 0.988991 0 49.9697 GTEX-11ZVC-0011-R1b-SM-5BC6M B1, A1 6.6 Brain Brain - Hippocampus 0001954 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.982901 344079 0.971542 0.989729 0.85713 21323 1 76 0.00253331 153 0 5.90307e+07 0.0282773 8.2992e+06 5.96433e+07 1.61577e+07 21337 2.92344e+07 0 0.114412 0.989729 0.848326 5.90307e+07 0.00558065 1.31965e+07 1.72278e+07 1.29476e+07 200 1.27706e+07 4.31953e+06 0.00404647 1.37395e+07 51.8274 0.139147 0.996556 0 49.524 GTEX-11ZVC-0011-R3a-SM-5BC6V B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.982955 741510 0.974326 0.988944 0.842414 22791 1 76 0.00255311 518 0 1.37849e+08 0.0255262 2.25875e+07 1.39391e+08 4.17382e+07 22803 6.83366e+07 0 0.131912 0.988944 0.8331 1.37849e+08 0.00534071 2.98466e+07 6.93628e+07 3.03692e+07 487 2.96485e+07 8.11381e+06 0.00393847 3.12011e+07 51.2758 0.162045 0.994933 0 50.4339 GTEX-11ZVC-0011-R4a-SM-5BC6Z B1, A1 7 Brain Brain - Amygdala 0001876 477 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98688 518469 0.965033 0.991834 0.842593 22048 1 76 0.00251183 196 0 6.87279e+07 0.0347917 9.2544e+06 6.92938e+07 1.73143e+07 22062 3.41087e+07 0 0.12244 0.991834 0.835713 6.87279e+07 0.00516787 1.51953e+07 2.64649e+07 1.49335e+07 244 1.47951e+07 4.95197e+06 0.00383322 1.56351e+07 51.3803 0.133553 0.996789 0 49.5656 GTEX-11ZVC-0011-R9a-SM-57WC5 B1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 477 BP-43314 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989575 642204 0.9517 0.99253 0.829755 21594 1 76 0.00185294 219 0 6.90648e+07 0.0480346 5.9059e+06 6.95846e+07 8.76057e+06 21607 3.43485e+07 0 0.121946 0.99253 0.823557 6.90648e+07 0.00378112 1.51792e+07 1.94921e+07 1.53625e+07 226 1.50986e+07 6.9881e+06 0.00281416 1.56358e+07 50.8739 0.0848736 0.995485 0 50.3001 GTEX-11ZVC-0126-SM-5986G 1 B1 2 pieces 6.9 Thyroid Thyroid 0002046 520 637 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.983805 345581 0.962799 0.987853 0.698078 24881 1 76 0.00279629 133 0 7.65589e+07 0.0368964 355966 7.75003e+07 1.61022e+07 24929 3.80264e+07 0 0.264721 0.987853 0.689598 7.65589e+07 0.0060718 1.66651e+07 1.16953e+07 1.67468e+07 149 1.68497e+07 1.06126e+07 0.00442733 1.68549e+07 50.0076 0.00459309 0.991901 0 50.1224 GTEX-11ZVC-0226-SM-731E8 1 B1 2 pieces; fibrosis. vascular sclerosis; pleura present 6.7 Lung Lung 0008952 521 636 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991483 415607 0.975359 0.993119 0.763489 24521 1 76 0.00359451 210 0 1.02256e+08 0.0241078 438175 1.02965e+08 1.23129e+07 24566 5.08544e+07 0 0.21187 0.993119 0.758235 1.02256e+08 0.00404366 2.26862e+07 8.8495e+06 2.27171e+07 244 2.28388e+07 1.71012e+07 0.00381872 2.27215e+07 49.8713 0.00425558 0.994755 0 50.034 GTEX-11ZVC-0326-SM-5CVLC 1 B1 6 pieces; well trimmed, free of plaques 6.1 Blood Vessel Artery - Aorta 0001496 525 632 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985218 248454 0.973943 0.989142 0.779383 22743 1 76 0.00496005 133 0 7.21293e+07 0.0256004 167088 7.2921e+07 1.38334e+07 22766 3.57641e+07 0 0.19456 0.989142 0.770921 7.21293e+07 0.0070588 1.55234e+07 6.47569e+06 1.56844e+07 141 1.57418e+07 1.2579e+07 0.00600526 1.57359e+07 49.9907 0.00229136 0.993067 0 50.2579 GTEX-11ZVC-0426-SM-5CVLD 1 B1 2 pieces; 5% internal fat; patchy hypereosinophilia (possible early ischemia) 5.9 Heart Heart - Left Ventricle 0006566 528 629 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986837 178751 0.982958 0.990682 0.824266 20898 1 76 0.00471346 194 0 7.49706e+07 0.0169387 3.96904e+06 7.56757e+07 1.51791e+07 20911 3.72332e+07 0 0.158692 0.990682 0.816586 7.49706e+07 0.00683111 1.66566e+07 2.55362e+07 1.64366e+07 239 1.643e+07 6.71316e+06 0.00576818 1.68903e+07 50.6907 0.052448 0.994526 0 49.6676 GTEX-11ZVC-0526-SM-5N9G1 0 B1 2 pieces; 50 and 30% external and internal fat 5.7 Heart Heart - Atrial Appendage 0006631 530 627 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988659 292275 0.978937 0.99014 0.81719 22842 1 76 0.00385052 367 0 9.39488e+07 0.0209294 5.38377e+06 9.48844e+07 4.47956e+06 22862 4.6704e+07 0 0.161747 0.99014 0.809133 9.39488e+07 0.00392358 2.06811e+07 2.45636e+07 2.0774e+07 334 2.06139e+07 6.86898e+06 0.00388699 2.09692e+07 50.4273 0.0567403 0.991621 0 50.112 GTEX-11ZVC-0726-SM-5FQT9 1 B1 2 pieces; capsule present on one piece 6.2 Liver Liver 0001114 541 616 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989094 304088 0.965855 0.99212 0.791806 21532 1 76 0.00219285 268 0 8.12239e+07 0.0339039 1.50831e+06 8.1869e+07 1.09258e+07 21550 4.03983e+07 0 0.174049 0.99212 0.785566 8.12239e+07 0.00355104 1.77386e+07 1.86976e+07 1.76473e+07 271 1.7629e+07 9.34683e+06 0.00286988 1.79723e+07 50.4822 0.0184235 0.995147 0 49.871 GTEX-11ZVC-1426-SM-5EGGA 1 B1 2 pieces; atrophic, corpora albicans, several small cysts 7.2 Ovary Ovary 0000992 553 604 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981689 235590 0.964616 0.987482 0.730783 23730 1 76 0.00243275 151 0 7.44893e+07 0.0351088 175216 7.54335e+07 1.20662e+07 23770 3.69271e+07 0 0.233833 0.987482 0.721635 7.44893e+07 0.0058803 1.61461e+07 1.01939e+07 1.63519e+07 148 1.64935e+07 1.37622e+07 0.00414641 1.64153e+07 49.8813 0.00232279 0.993276 0 50.3166 GTEX-11ZVC-2126-SM-5EGJ1 3 B1 6 pieces; mucosa=3; muscularis=1; only muscle useful for GTEx 7 Colon Colon - Transverse 0001157 573 584 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98928 282679 0.970553 0.992528 0.797638 24188 1 76 0.00185035 274 0 9.08453e+07 0.0291185 587957 9.15292e+07 8.47106e+06 24215 4.51625e+07 0 0.172914 0.992528 0.791678 9.08453e+07 0.0029361 1.94631e+07 8.59242e+06 1.96738e+07 265 1.9707e+07 1.56032e+07 0.00239145 1.97045e+07 49.9967 0.00642371 0.995775 0 50.2693 GTEX-11ZVC-2526-SM-5FQTE 0 B1 6 pieces; well trimmed 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 640 517 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989636 185586 0.973737 0.992504 0.806874 23950 1 76 0.00233377 163 0 7.16471e+07 0.0259427 339357 7.21882e+07 1.00785e+07 23972 3.56405e+07 0 0.166863 0.992504 0.800826 7.16471e+07 0.00362539 1.5662e+07 7.51554e+06 1.56766e+07 165 1.57179e+07 1.32061e+07 0.00297772 1.58143e+07 50.1528 0.004701 0.995373 0 50.0233 GTEX-11ZVC-2626-SM-5FQTA 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 642 515 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98838 255148 0.9721 0.991814 0.774452 23707 1 76 0.00239211 164 0 7.69834e+07 0.0275594 558742 7.76188e+07 9.9272e+06 23735 3.82651e+07 0 0.197648 0.991814 0.768112 7.69834e+07 0.00370582 1.69645e+07 9.11622e+06 1.69378e+07 192 1.69813e+07 1.19961e+07 0.00304669 1.71697e+07 50.2758 0.00719854 0.995247 0 49.9606 GTEX-11ZVC-2726-SM-5FQSZ 0 B1 2 pieces, but fragmented 8 Muscle Muscle - Skeletal 0011907 643 514 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989265 291211 0.983079 0.992872 0.871223 21123 1 76 0.00191047 270 0 9.145e+07 0.0165263 1.09481e+06 9.21065e+07 1.41e+07 21132 4.54715e+07 0 0.111856 0.992872 0.865013 9.145e+07 0.00319478 1.93049e+07 1.18064e+07 1.91922e+07 257 1.92169e+07 2.01025e+07 0.00255029 1.95817e+07 50.4701 0.0118863 0.996479 0 49.8536 GTEX-11ZVC-2826-SM-5FQTC 0 B1 2 pieces; 10% internal fat 7.5 Nerve Nerve - Tibial 0001323 645 512 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987632 261615 0.968065 0.991367 0.727855 24404 1 76 0.00235876 172 0 7.60342e+07 0.0316501 430672 7.66963e+07 1.16738e+07 24448 3.77722e+07 0 0.24021 0.991367 0.721572 7.60342e+07 0.00367784 1.67258e+07 7.79502e+06 1.68307e+07 166 1.68784e+07 1.12559e+07 0.00301582 1.6946e+07 50.1 0.00561529 0.995103 0 50.1564 GTEX-11ZVC-2926-SM-5986H 1 B1 2 pieces; well trimmed of fat; some perivascular stroma present [annotated] 7.6 Blood Vessel Artery - Tibial 0007610 647 510 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.985464 351478 0.967691 0.990203 0.806099 21806 1 76 0.00260719 138 0 7.07733e+07 0.0319385 575099 7.14735e+07 1.38103e+07 21823 3.51273e+07 0 0.161592 0.990203 0.798202 7.07733e+07 0.00631788 1.49939e+07 1.10745e+07 1.5104e+07 150 1.51744e+07 1.29016e+07 0.00445365 1.52311e+07 50.0933 0.00804632 0.994943 0 50.1829 GTEX-11ZVC-3026-SM-59HJM 1 B1 3 pieces 5.9 Brain Brain - Cerebellum 0002037 707 450 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.977725 569593 0.942959 0.984827 0.74403 24609 1 76 0.00280747 267 0 9.23155e+07 0.0567956 3.00481e+06 9.37379e+07 1.93487e+07 24641 4.57022e+07 0 0.198929 0.984827 0.73274 9.23155e+07 0.0091359 1.97384e+07 2.65331e+07 1.98677e+07 278 1.99848e+07 8.25209e+06 0.00594887 2.01914e+07 50.2572 0.0320555 0.991928 0 50.1633 GTEX-11ZVC-3226-SM-5FQV1 1 B1 1 piece with anterior and posterior portions 6.3 Pituitary Pituitary 0000007 709 448 BP-43823 RNA Extraction from Paxgene-derived Lysate Plate Based 09/20/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989444 509422 0.951275 0.992354 0.751006 25854 1 76 0.00234151 201 0 9.40181e+07 0.0485311 605243 9.47425e+07 1.27278e+07 25898 4.67479e+07 0 0.200269 0.992354 0.745264 9.40181e+07 0.00371093 1.70803e+07 2.15752e+07 1.73488e+07 249 1.73918e+07 1.47983e+07 0.00302421 1.72787e+07 49.8369 0.0063883 0.995264 0 50.39 GTEX-1211K-0001-SM-5S2P9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -66 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991578 548725 0.962208 0.993223 0.828854 19554 1 76 0.00181004 129 0 5.61783e+07 0.0374312 416882 5.65616e+07 3.27674e+06 19566 2.79613e+07 0 0.133354 0.993223 0.823236 5.61783e+07 0.00258535 1.22908e+07 1.05804e+07 1.24245e+07 130 1.23848e+07 1.20584e+07 0.00219705 1.24365e+07 50.104 0.0073704 0.994867 0 50.2704 GTEX-1211K-0003-SM-58Q98 B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1211K-0003-SM-5DWTL B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1211K-0003-SM-7DRPU B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1211K-0003-SM-CLTG2 B1 Blood Whole Blood 0013756 -66 BP-40499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1211K-0006-SM-5MR53 B1 9.1 Blood Whole Blood 0013756 -66 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992936 599477 0.962191 0.993435 0.80138 18211 1 76 0.00293368 154 0 8.57279e+07 0.0373064 249159 8.62944e+07 3.35938e+06 18225 4.27347e+07 0 0.160811 0.993435 0.796119 8.57279e+07 0.0029595 1.89066e+07 4.55947e+07 1.90687e+07 175 1.90706e+07 1.80026e+07 0.00294658 1.89571e+07 49.8507 0.00288731 0.993934 0 50.2134 GTEX-1211K-0008-SM-5S2W1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 145 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992609 367256 0.976977 0.99475 0.868375 19936 1 76 0.00159812 139 0 6.28697e+07 0.0227561 312922 6.32015e+07 6.13358e+06 19952 3.13033e+07 0 0.108602 0.99475 0.863816 6.28697e+07 0.00258567 1.39522e+07 9.25134e+06 1.40801e+07 145 1.40654e+07 1.49768e+07 0.00209084 1.41055e+07 50.0712 0.00495118 0.99689 0 50.2281 GTEX-1211K-0126-SM-59HJE 1 B1 2 pieces: sample blindly with care: one aliquot is ~20% cortex (delineated), rest fat; other is 90% cortex, well preserved 9.3 Adrenal Gland Adrenal Gland 0002369 72 484 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.98419 352272 0.977667 0.989964 0.830288 23898 1 76 0.00235085 270 0 9.71138e+07 0.0218912 1.25978e+06 9.80983e+07 1.82705e+07 23917 4.8163e+07 0 0.147379 0.989964 0.821956 9.71138e+07 0.00841147 2.13981e+07 1.68428e+07 2.12756e+07 287 2.13896e+07 1.62984e+07 0.00536349 2.17383e+07 50.4043 0.012842 0.995738 0 49.8565 GTEX-1211K-0226-SM-59HJY 1 B1 2 pieces, no abnormalities 8.6 Heart Heart - Atrial Appendage 0006631 66 490 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.983539 267050 0.979848 0.989576 0.845673 21807 1 76 0.00223742 196 0 8.42717e+07 0.0195726 1.69778e+06 8.51593e+07 1.64768e+07 21825 4.17859e+07 0 0.134175 0.989576 0.836858 8.42717e+07 0.00836447 1.81067e+07 1.71049e+07 1.79042e+07 248 1.79188e+07 1.36429e+07 0.00528225 1.84698e+07 50.7571 0.0199366 0.995614 0 49.7189 GTEX-1211K-0326-SM-5FQT1 1 B1 6 pieces, minimal atherosis 7.5 Blood Vessel Artery - Aorta 0001496 68 488 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990694 204226 0.978567 0.993583 0.86521 22006 1 76 0.00200188 206 0 7.98902e+07 0.0210734 277337 8.04062e+07 1.10606e+07 22016 3.97453e+07 0 0.113357 0.993583 0.859658 7.98902e+07 0.00329827 1.7385e+07 6.8535e+06 1.74949e+07 223 1.74786e+07 1.63533e+07 0.00264819 1.7621e+07 50.2028 0.0034492 0.996471 0 50.1575 GTEX-1211K-0426-SM-5FQTP 1 B1 2 pieces, no abnormalities 7.7 Spleen Spleen 0002106 72 484 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988893 294351 0.961324 0.992022 0.749355 26217 1 76 0.00248789 200 0 8.51898e+07 0.0379828 313475 8.5875e+07 1.14339e+07 26254 4.23389e+07 0 0.211969 0.992022 0.743377 8.51898e+07 0.00381883 1.8613e+07 1.03542e+07 1.87465e+07 203 1.87933e+07 1.27005e+07 0.00315126 1.88159e+07 50.03 0.00365037 0.99515 0 50.1786 GTEX-1211K-0626-SM-5FQUZ 1 B1 2 pieces, minimal ischemic damage 8.5 Heart Heart - Left Ventricle 0006566 84 472 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991187 242617 0.984499 0.99367 0.863763 20302 1 76 0.00184737 270 0 8.26915e+07 0.01524 1.3812e+06 8.32183e+07 1.09449e+07 20312 4.11693e+07 0 0.120736 0.99367 0.858295 8.26915e+07 0.00303751 1.83946e+07 1.83686e+07 1.80784e+07 267 1.79915e+07 1.39476e+07 0.00244095 1.8669e+07 50.924 0.0165973 0.996153 0 49.5665 GTEX-1211K-0726-SM-5FQUW 1 B1 2 pieces, few small lymphoid aggregates, not sufficient for Hashimotos, but may be early stage condition. 7 Thyroid Thyroid 0002046 87 469 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989728 198116 0.967365 0.992628 0.764664 23374 1 76 0.00213238 133 0 7.17886e+07 0.0323522 346145 7.23218e+07 1.01466e+07 23410 3.57172e+07 0 0.202701 0.992628 0.759027 7.17886e+07 0.00339086 1.57119e+07 7.30536e+06 1.57533e+07 160 1.5759e+07 1.17182e+07 0.00275978 1.58979e+07 50.2193 0.00478618 0.995527 0 50.0657 GTEX-1211K-0826-SM-5FQUP 1 B1 2 pieces, mild congestion 8.2 Lung Lung 0008952 92 464 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988711 254241 0.977922 0.992377 0.831495 23354 1 76 0.00217508 206 0 8.11951e+07 0.0216506 265064 8.18187e+07 1.25258e+07 23376 4.03565e+07 0 0.146427 0.992377 0.825157 8.11951e+07 0.0035433 1.79644e+07 7.3776e+06 1.81053e+07 209 1.81553e+07 1.58489e+07 0.00285666 1.81975e+07 50.0581 0.00323965 0.996044 0 50.1952 GTEX-1211K-0926-SM-5FQTL 1 B1 6 pieces, squamous mucosa is ~10% thickness 9.4 Esophagus Esophagus - Mucosa 0006920 98 458 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988536 189405 0.977121 0.991682 0.833482 22314 1 76 0.00223719 141 0 6.67661e+07 0.0225038 283309 6.73261e+07 9.87374e+06 22333 3.32095e+07 0 0.143638 0.991682 0.826549 6.67661e+07 0.00361481 1.49775e+07 9.04264e+06 1.50296e+07 151 1.5072e+07 1.37254e+07 0.00292381 1.5136e+07 50.1059 0.00420801 0.994828 0 50.0868 GTEX-1211K-1026-SM-5EQ4B 1 B1 6 pieces, all muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 101 455 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992381 213795 0.978438 0.994577 0.84541 21524 1 76 0.00173494 208 0 7.70788e+07 0.0212966 822535 7.74991e+07 8.83264e+06 21538 3.83775e+07 0 0.133028 0.994577 0.840826 7.70788e+07 0.00265558 1.673e+07 1.00151e+07 1.68353e+07 244 1.67785e+07 1.34622e+07 0.00219424 1.69519e+07 50.2571 0.0106135 0.996773 0 50.1569 GTEX-1211K-1126-SM-5EGGB 1 B1 2 pieces ~20% interstitial fat delineated; Islets well-visualized, rep encircled 7.3 Pancreas Pancreas 0001150 105 451 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98534 207902 0.972733 0.989962 0.852353 20595 1 76 0.00245909 95 0 5.95331e+07 0.0270419 134839 6.01368e+07 9.49311e+06 20605 2.95597e+07 0 0.12038 0.989962 0.843797 5.95331e+07 0.00561215 1.35058e+07 1.44097e+07 1.36733e+07 100 1.36835e+07 1.68332e+07 0.00402826 1.37687e+07 50.1552 0.00224221 0.994584 0 50.3082 GTEX-1211K-1226-SM-5EQ4N 1 B1 2 pieces, minimal fibrosis 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 107 449 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991459 260325 0.97887 0.99372 0.843665 22414 1 76 0.00177076 275 0 8.61739e+07 0.0208334 447016 8.67185e+07 1.06498e+07 22432 4.2902e+07 0 0.135206 0.99372 0.838367 8.61739e+07 0.00261323 1.8976e+07 1.22221e+07 1.91124e+07 260 1.90502e+07 1.60792e+07 0.00219103 1.92242e+07 50.2272 0.0051548 0.995981 0 50.179 GTEX-1211K-1326-SM-5FQV2 1 B1 6 pieces, all muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 110 446 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991404 223729 0.977847 0.993904 0.857726 21459 1 76 0.00197498 276 0 9.03697e+07 0.0219399 1.33972e+06 9.0924e+07 1.13783e+07 21475 4.49775e+07 0 0.120121 0.993904 0.852497 9.03697e+07 0.00324126 1.94381e+07 1.04334e+07 1.95835e+07 311 1.9427e+07 1.41339e+07 0.00260652 1.9798e+07 50.4728 0.0147345 0.996404 0 50.1864 GTEX-1211K-1426-SM-5FQTF 1 B1 6 pieces, fairly well preserved mucosa, ~10-15% thickness, superficial areas approach 'score 2' focally 8.2 Stomach Stomach 0000945 115 441 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988501 377666 0.976607 0.992356 0.840514 24517 1 76 0.00205289 289 0 1.27968e+08 0.0230887 767190 1.28954e+08 2.01061e+07 24542 6.361e+07 0 0.136093 0.992356 0.834089 1.27968e+08 0.00332473 2.77713e+07 1.42469e+07 2.79965e+07 324 2.80166e+07 2.41389e+07 0.00268634 2.82073e+07 50.1696 0.00594935 0.99621 0 50.2019 GTEX-1211K-1526-SM-5FQU4 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 117 439 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989838 161955 0.972885 0.992615 0.810621 23150 1 76 0.00215993 157 0 6.30733e+07 0.0268829 518102 6.35425e+07 8.50408e+06 23172 3.13871e+07 0 0.162264 0.992615 0.804635 6.30733e+07 0.00350454 1.39297e+07 7.45051e+06 1.39537e+07 153 1.39546e+07 1.06543e+07 0.00283036 1.40954e+07 50.251 0.00815363 0.995393 0 50.0429 GTEX-1211K-1726-SM-5FQUJ 1 B1 6 pieces, well preserved mucosa 6.9 Colon Colon - Transverse 0001157 131 425 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988945 164806 0.972139 0.99211 0.78931 22578 1 76 0.00227375 133 0 6.03914e+07 0.0271741 1.16416e+06 6.08717e+07 8.5267e+06 22600 3.00226e+07 0 0.182829 0.99211 0.783082 6.03914e+07 0.0035108 1.35066e+07 1.1392e+07 1.32549e+07 159 1.32406e+07 6.97284e+06 0.0028903 1.36976e+07 50.8482 0.0191248 0.995275 0 49.5299 GTEX-1211K-1826-SM-5EGJ2 1 B1 6 pieces, all muscularis/adherent fat/serosa, rep delineated 7.8 Colon Colon - Sigmoid 0001159 135 421 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991261 294225 0.976652 0.993803 0.831703 22657 1 76 0.00166993 203 0 7.54527e+07 0.0230594 519089 7.59232e+07 6.61368e+06 22677 3.75458e+07 0 0.144949 0.993803 0.826549 7.54527e+07 0.00273109 1.63446e+07 8.66764e+06 1.65306e+07 214 1.65081e+07 1.29556e+07 0.00219916 1.65441e+07 50.0544 0.00683703 0.996345 0 50.2829 GTEX-1211K-1926-SM-5EQLB 1 B1 2 pieces, mild fibrocystic change, rep ductal cysts delineated 7.8 Breast Breast - Mammary Tissue 0008367 140 416 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992679 168757 0.975622 0.99422 0.814978 23643 1 76 0.00198943 168 0 7.39445e+07 0.0237893 223931 7.43744e+07 9.53442e+06 23670 3.68275e+07 0 0.160643 0.99422 0.810267 7.39445e+07 0.00286811 1.63395e+07 7.58253e+06 1.64305e+07 177 1.64017e+07 1.42444e+07 0.00242809 1.6478e+07 50.116 0.00301086 0.99576 0 50.1388 GTEX-1211K-2026-SM-5EQ4Z 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 145 411 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.975802 244746 0.977196 0.978415 0.84525 21937 1 76 0.00190611 174 0 6.26296e+07 0.0225618 452897 6.40113e+07 7.68948e+06 21955 3.11426e+07 0 0.131946 0.978415 0.827006 6.26296e+07 0.0033302 1.37723e+07 6.9371e+06 1.38797e+07 163 1.38393e+07 1.1202e+07 0.00261625 1.39726e+07 50.2396 0.00707526 0.981028 0 50.1943 GTEX-1211K-2126-SM-59HJZ 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 147 409 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982999 287990 0.98384 0.989626 0.879927 19612 1 76 0.00213146 140 0 6.93501e+07 0.0159119 386251 7.00771e+07 1.31913e+07 19617 3.43763e+07 0 0.103913 0.989626 0.870798 6.93501e+07 0.00851484 1.51082e+07 8.75152e+06 1.51239e+07 159 1.52515e+07 1.44853e+07 0.00530177 1.53919e+07 50.229 0.0055118 0.996252 0 50.0259 GTEX-1211K-2226-SM-5FQU6 0 B1 2 pieces, ~40% intermingled fascia/fibrous tissue, delineated 8.6 Adipose Tissue Adipose - Subcutaneous 0002190 148 408 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990836 199141 0.976913 0.993209 0.816335 21929 1 76 0.00205267 142 0 6.47935e+07 0.0227338 160365 6.52365e+07 8.68991e+06 21946 3.22533e+07 0 0.160578 0.993209 0.810792 6.47935e+07 0.00318609 1.42887e+07 6.00615e+06 1.43241e+07 150 1.43357e+07 1.22599e+07 0.00261802 1.44215e+07 50.1491 0.00245821 0.995584 0 50.0618 GTEX-1211K-2326-SM-5FQU7 0 B1 2 pieces clean, minute nubbin of fat, delineated 8 Nerve Nerve - Tibial 0001323 151 405 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98767 241775 0.971804 0.991638 0.783802 23474 1 76 0.00218018 182 0 7.57696e+07 0.0278827 208650 7.64085e+07 1.16551e+07 23504 3.76532e+07 0 0.188003 0.991638 0.777247 7.57696e+07 0.00350856 1.67171e+07 7.2481e+06 1.67746e+07 181 1.6855e+07 1.32501e+07 0.00284171 1.692e+07 50.0963 0.00273072 0.995606 0 50.0858 GTEX-1211K-2426-SM-59HL8 0 B1 2 pieces, minimal circumferential fibrous tissue up to ~0.3mm, good specimens 7.6 Blood Vessel Artery - Tibial 0007610 152 404 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.978875 419040 0.973522 0.985917 0.832716 23696 1 76 0.00235975 381 0 1.35857e+08 0.0260757 841592 1.37798e+08 2.91797e+07 23730 6.72701e+07 0 0.140806 0.985917 0.820989 1.35857e+08 0.00867866 2.91645e+07 1.28102e+07 2.94271e+07 337 2.96863e+07 2.47887e+07 0.00549664 2.97781e+07 50.0772 0.00610745 0.992958 0 50.2241 GTEX-1211K-5001-SM-AN3X5 B1 Heart Heart - Left Ventricle 0006566 85 ChIP-Seq GTEX-1211K-5019-SM-AN3X7 B1 Muscle Muscle - Skeletal 0011907 146 ChIP-Seq GTEX-12126-0001-SM-58Q8L C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12126-0001-SM-5DWTE C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12126-0001-SM-6WBU6 C1 Blood Whole Blood 0013756 803 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12126-0006-SM-5O9B8 C1 7.2 Blood Whole Blood 0013756 803 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.982545 786946 0.960479 0.986408 0.75099 19876 1 76 0.00275886 124 0 8.22988e+07 0.0386982 176702 8.34328e+07 1.13431e+07 19893 4.08307e+07 0 0.209489 0.986408 0.740783 8.22988e+07 0.00521706 1.85335e+07 1.01199e+08 1.87194e+07 130 1.87478e+07 1.82987e+07 0.00398315 1.88644e+07 50.155 0.0021179 0.990271 0 50.2495 GTEX-12126-0008-SM-5S2UC C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 928 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992878 519320 0.975511 0.99489 0.866595 21470 1 76 0.00182456 284 0 1.16851e+08 0.0241931 450304 1.17452e+08 1.16748e+07 21488 5.82094e+07 0 0.108917 0.99489 0.862167 1.16851e+08 0.00271716 2.59379e+07 1.92574e+07 2.61303e+07 311 2.61434e+07 2.82448e+07 0.00226996 2.61603e+07 50.0161 0.00383395 0.996903 0 50.1847 GTEX-12126-0011-R10b-SM-5BC6T C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986789 603787 0.962003 0.991621 0.847746 22612 1 76 0.00329166 151 0 7.07894e+07 0.0374982 4.14979e+06 7.13876e+07 1.88023e+07 22621 3.51347e+07 0 0.114256 0.991621 0.840643 7.07894e+07 0.00553495 1.54986e+07 2.1355e+07 1.52389e+07 201 1.52782e+07 8.11052e+06 0.00440784 1.57605e+07 50.777 0.0581304 0.996454 0 49.5775 GTEX-12126-0011-R11a-SM-5BC6X C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.984946 545425 0.948885 0.990158 0.776268 23008 1 76 0.00310055 129 0 6.82091e+07 0.0506296 1.30224e+06 6.88871e+07 2.04027e+07 23027 3.38301e+07 0 0.172617 0.990158 0.768628 6.82091e+07 0.00566164 1.46239e+07 1.38849e+07 1.47627e+07 156 1.48757e+07 8.95437e+06 0.00437436 1.48435e+07 49.9459 0.018904 0.995369 0 50.2361 GTEX-12126-0011-R9b-SM-5BC6P C1, A1 8.5 Brain Brain - Spinal cord (cervical c-1) 0006469 825 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988081 703888 0.95464 0.992352 0.831051 23113 1 76 0.00301565 220 0 7.62167e+07 0.0449574 2.14965e+06 7.6804e+07 2.06322e+07 23128 3.78498e+07 0 0.123589 0.992352 0.824696 7.62167e+07 0.00513027 1.6696e+07 1.72641e+07 1.69227e+07 205 1.68362e+07 1.08112e+07 0.00406841 1.71024e+07 50.3922 0.0279888 0.996624 0 50.3373 GTEX-12126-0326-SM-5PNW3 1 C1 6 pieces; well trimmed, but with 10% intradermal fat 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 927 957 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.987866 186983 0.973391 0.989831 0.828091 22742 1 76 0.00250363 162 0 6.79139e+07 0.026417 659295 6.86116e+07 6.20382e+06 22764 3.38091e+07 0 0.1453 0.989831 0.81967 6.79139e+07 0.00365313 1.48384e+07 1.01599e+07 1.49720e+07 169 1.49193e+07 1.05454e+07 0.00307724 1.50119e+07 50.1546 0.00960909 0.991796 0 50.2242 GTEX-12126-0426-SM-5Q5AP 0 C1 2 pieces; scattered tissue holes 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 930 955 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989534 194227 0.975319 0.992214 0.817781 22231 1 76 0.00210063 149 0 6.4316e+07 0.0243511 274158 6.48207e+07 4.87687e+06 22245 3.19694e+07 0 0.157538 0.992214 0.811414 6.4316e+07 0.00321766 1.41235e+07 6.4634e+06 1.42065e+07 154 1.41934e+07 1.13109e+07 0.00265764 1.43018e+07 50.1903 0.00422948 0.994894 0 50.1464 GTEX-12126-0526-SM-5PNW4 0 C1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 935 950 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992553 197609 0.98579 0.99429 0.890169 18557 1 76 0.00198423 127 0 7.44173e+07 0.0139819 582977 7.48447e+07 6.91217e+06 18559 3.70841e+07 0 0.0956209 0.99429 0.885086 7.44173e+07 0.0029103 1.6187e+07 6.94609e+06 1.61675e+07 161 1.62007e+07 1.77841e+07 0.00244646 1.62724e+07 50.1103 0.00778916 0.996027 0 49.9699 GTEX-12126-0526-SM-CYKNY 0 C1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 935 950 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-12126-0626-SM-5Q5AQ 0 C1 2 pieces; 20% external and internal fat 5.8 Nerve Nerve - Tibial 0001323 940 946 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98734 200481 0.965366 0.989864 0.733692 23291 1 76 0.00221473 129 0 5.87143e+07 0.0343834 276843 5.93154e+07 4.44552e+06 23318 2.91676e+07 0 0.231674 0.989864 0.726256 5.87143e+07 0.00355647 1.28674e+07 5.8802e+06 1.29684e+07 136 1.29367e+07 8.19739e+06 0.00288389 1.30427e+07 50.2039 0.0046673 0.992389 0 50.1954 GTEX-12126-0726-SM-5FQTX 0 C1 2 pieces; excellent normal 8.3 Blood Vessel Artery - Tibial 0007610 942 944 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990149 231627 0.976289 0.993247 0.873713 19477 1 76 0.00219824 140 0 6.81744e+07 0.0233189 214732 6.86379e+07 1.06238e+07 19482 3.39014e+07 0 0.102576 0.993247 0.867813 6.81744e+07 0.0036048 1.4335e+07 5.1486e+06 1.44383e+07 155 1.44145e+07 1.46504e+07 0.00289933 1.4557e+07 50.2459 0.00312848 0.996346 0 50.1794 GTEX-12126-0826-SM-5FQTZ 1 C1 6 pieces; well trimmed; 3 pieces have 10% intradermal fat, 3 have no measurable fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 955 932 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987268 284434 0.9766 0.991247 0.822856 22973 1 76 0.00254854 165 0 6.76995e+07 0.0231355 326620 6.82973e+07 9.32795e+06 22994 3.36099e+07 0 0.153744 0.991247 0.815653 6.76995e+07 0.00440749 1.48353e+07 8.6037e+06 1.48699e+07 156 1.49193e+07 1.22264e+07 0.00347429 1.5045e+07 50.2097 0.00478233 0.995225 0 50.0582 GTEX-12126-0926-SM-5FQTW 0 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 996 891 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987682 381743 0.94607 0.99111 0.717608 23806 1 76 0.00280706 155 0 7.84545e+07 0.0535697 1.15743e+06 7.91582e+07 1.20504e+07 23835 3.89831e+07 0 0.228461 0.99111 0.711229 7.84545e+07 0.00401787 1.68852e+07 1.51394e+07 1.7027e+07 181 1.71005e+07 9.37054e+06 0.00341037 1.70571e+07 49.9366 0.0146217 0.994538 0 50.2091 GTEX-12126-1026-SM-5P9JJ 0 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 998 890 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993004 649690 0.955477 0.993438 0.819355 24367 1 76 0.00376087 269 0 1.06424e+08 0.0441267 4.08786e+06 1.07127e+08 3.49014e+06 24387 5.30297e+07 0 0.136123 0.993438 0.813978 1.06424e+08 0.00397185 2.29941e+07 3.35357e+07 2.31483e+07 299 2.29918e+07 1.25262e+07 0.00386631 2.31958e+07 50.2208 0.038159 0.993873 0 50.1671 GTEX-12126-1026-SM-CYKSE 0 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 998 890 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-12126-1126-SM-5P9GP 2 C1 1 piece; up to 2 mm adherent stroma and vessels 6.7 Pituitary Pituitary 0000007 999 889 BP-47888 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991607 803048 0.948635 0.992092 0.768983 26421 1 76 0.00326958 375 0 1.30181e+08 0.0510991 1.25148e+06 1.31218e+08 4.23587e+06 26468 6.4833e+07 0 0.179652 0.992092 0.762902 1.30181e+08 0.00392929 2.69098e+07 3.76765e+07 2.73059e+07 335 2.72447e+07 1.85727e+07 0.00359927 2.70429e+07 49.8141 0.00953739 0.992578 0 50.3653 GTEX-1212Z-0002-SM-5SI6W B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 478 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988639 594128 0.969562 0.991581 0.838901 21055 1 76 0.00218819 216 0 9.36014e+07 0.0294094 566321 9.43961e+07 9.39534e+06 21075 4.65319e+07 0 0.130661 0.991581 0.831838 9.36014e+07 0.00321267 2.07973e+07 1.65909e+07 2.08742e+07 251 2.09507e+07 2.16081e+07 0.00269891 2.09962e+07 50.0543 0.00599941 0.994523 0 50.0922 GTEX-1212Z-0004-SM-58Q8P B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1212Z-0004-SM-5DWTI B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-1212Z-0004-SM-7DRQE B1 Blood Whole Blood 0013756 478 BP-40502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1212Z-0006-SM-5NQ8M B1 8.6 Blood Whole Blood 0013756 478 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.980252 196108 0.987162 0.982085 0.809783 18000 1 76 0.00226475 101 0 7.36547e+07 0.0120701 163439 7.49983e+07 6.26431e+06 18005 3.66686e+07 0 0.177379 0.982085 0.795276 7.36547e+07 0.00324889 1.73625e+07 9.60788e+07 1.76067e+07 128 1.76318e+07 1.97025e+07 0.0027559 1.74836e+07 49.789 0.00217923 0.983917 0 50.349 GTEX-1212Z-0008-SM-5TDBW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 757 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989057 511565 0.977504 0.992086 0.877285 20988 1 76 0.00192972 210 0 8.96845e+07 0.0222201 453785 9.03999e+07 1.0841e+07 20999 4.46088e+07 0 0.100219 0.992086 0.870342 8.96845e+07 0.0036069 2.01153e+07 1.47149e+07 2.02072e+07 228 2.02527e+07 2.26492e+07 0.00276575 2.0345e+07 50.1137 0.00501975 0.995115 0 50.1139 GTEX-1212Z-0011-R1b-SM-5BC72 B1, A1 7.2 Brain Brain - Hippocampus 0001954 537 BP-43234 RNA isolation_PAXgene Tissue miRNA 09/06/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98649 383478 0.964201 0.991456 0.819968 22050 1 76 0.00251169 145 0 5.67229e+07 0.0355891 5.18887e+06 5.72117e+07 1.48443e+07 22064 2.81493e+07 0 0.144233 0.991456 0.812962 5.67229e+07 0.00517979 1.26124e+07 1.77631e+07 1.2297e+07 177 1.21855e+07 4.47237e+06 0.00383906 1.29817e+07 51.582 0.090696 0.996423 0 49.367 GTEX-1212Z-0126-SM-59HK4 1 B1 6 pieces, well trimmed 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 602 1160 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980804 295694 0.967413 0.987273 0.75551 25302 1 76 0.0025439 213 0 9.03923e+07 0.0323849 635270 9.15576e+07 1.86154e+07 25333 4.47941e+07 0 0.211904 0.987273 0.745894 9.03923e+07 0.00855496 1.97128e+07 1.19926e+07 1.97727e+07 218 1.99469e+07 1.29818e+07 0.00552974 2.00747e+07 50.1596 0.00693848 0.993741 0 50.0759 GTEX-1212Z-0226-SM-59HLF 1 B1 2 pieces, mild steatosis 6.4 Liver Liver 0001114 604 1158 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.984364 245032 0.979155 0.989994 0.809875 20936 1 76 0.00238556 115 0 6.35911e+07 0.0206795 824389 6.42338e+07 1.13299e+07 20953 3.1543e+07 0 0.169279 0.989994 0.801772 6.35911e+07 0.00815806 1.38139e+07 9.21524e+06 1.37468e+07 139 1.38489e+07 1.08379e+07 0.00525539 1.40314e+07 50.3272 0.0128342 0.995624 0 49.8783 GTEX-1212Z-0326-SM-5FQSJ 1 B1 2 pieces, spermatogenesis is present, increased peritubular fibrosis and rare hyalinized tubule 6.7 Testis Testis 0000473 608 1154 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988556 376800 0.924435 0.991436 0.716115 33895 1 76 0.00224764 217 0 8.85211e+07 0.0752312 844836 8.92857e+07 1.17697e+07 33965 4.40334e+07 0 0.20832 0.991436 0.709982 8.85211e+07 0.00334939 1.83365e+07 1.3471e+07 1.83108e+07 210 1.83925e+07 1.40272e+07 0.00279691 1.84855e+07 50.1262 0.00946216 0.994315 0 49.9649 GTEX-1212Z-0426-SM-5FQT6 2 B1 2 pieces, regressive changes 6.9 Thyroid Thyroid 0002046 609 1153 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989302 236831 0.969265 0.992286 0.714236 25353 1 76 0.00229617 134 0 7.32255e+07 0.030447 387434 7.37947e+07 9.94419e+06 25392 3.64115e+07 0 0.255029 0.992286 0.708727 7.32255e+07 0.0036691 1.60549e+07 7.65784e+06 1.61493e+07 153 1.6192e+07 1.05066e+07 0.00298057 1.62154e+07 50.0361 0.00525016 0.99527 0 50.1465 GTEX-1212Z-0526-SM-5FQSQ 0 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 612 1150 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987411 225280 0.979278 0.990817 0.850205 23045 1 76 0.00218146 174 0 7.6279e+07 0.0203942 572497 7.69859e+07 1.03751e+07 23060 3.79141e+07 0 0.129074 0.990817 0.842397 7.6279e+07 0.00389126 1.67644e+07 9.83439e+06 1.68371e+07 188 1.68385e+07 1.50173e+07 0.00303342 1.70176e+07 50.2645 0.00743638 0.994224 0 50.1082 GTEX-1212Z-0626-SM-5FQTB 1 B1 2 pieces, 1mmx2mm area of scar, mild interstitial fibrosis 6.9 Heart Heart - Left Ventricle 0006566 621 1141 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988524 198923 0.984406 0.992082 0.84049 20550 1 76 0.00197579 265 0 7.50346e+07 0.01547 3.24742e+06 7.56335e+07 1.12152e+07 20558 3.73131e+07 0 0.143916 0.992082 0.833835 7.50346e+07 0.00336312 1.67178e+07 2.30567e+07 1.64855e+07 283 1.6433e+07 7.3383e+06 0.00266697 1.69864e+07 50.8279 0.0429363 0.99564 0 49.6502 GTEX-1212Z-0726-SM-5EGI5 1 B1 2 pieces, increased interstitial fibrosis 6.9 Heart Heart - Atrial Appendage 0006631 624 1138 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982836 177266 0.981077 0.988893 0.831667 21097 1 76 0.002208 195 0 6.92432e+07 0.0187468 2.39197e+06 7.0021e+07 1.10393e+07 21108 3.43428e+07 0 0.14941 0.988893 0.82243 6.92432e+07 0.00562535 1.4855e+07 1.48704e+07 1.46169e+07 213 1.46706e+07 8.39824e+06 0.00390621 1.51411e+07 50.7892 0.0341607 0.994949 0 49.5961 GTEX-1212Z-0826-SM-5EQ51 1 B1 6 pieces, minimal plaque 6.4 Blood Vessel Artery - Aorta 0001496 626 1136 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990547 271090 0.975975 0.992906 0.788045 22306 1 76 0.0020988 165 0 7.99429e+07 0.0235782 325254 8.0514e+07 9.91725e+06 22325 3.97519e+07 0 0.187929 0.992906 0.782455 7.99429e+07 0.0031035 1.72673e+07 7.659e+06 1.74806e+07 189 1.74935e+07 1.39973e+07 0.00259996 1.74351e+07 49.9164 0.00403972 0.995266 0 50.3068 GTEX-1212Z-1026-SM-5EGJ8 1 B1 2 pieces, congested, numerous hemosiderin-laden macrophages (heart failure cells) 6.2 Lung Lung 0008952 636 1126 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988705 321491 0.973053 0.991866 0.727954 23405 1 76 0.00205063 134 0 6.915e+07 0.026643 426699 6.97171e+07 5.58249e+06 23432 3.43556e+07 0 0.245099 0.991866 0.722033 6.915e+07 0.00329334 1.52277e+07 6.59887e+06 1.53654e+07 155 1.53818e+07 9.56868e+06 0.00267001 1.54181e+07 50.0589 0.00612044 0.995026 0 50.2249 GTEX-1212Z-1826-SM-5FQSH 1 B1 6 pieces, well trimmed 6.2 Colon Colon - Sigmoid 0001159 652 1110 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989569 288615 0.968573 0.992644 0.789656 23833 1 76 0.0022593 203 0 8.54578e+07 0.0312217 1.01592e+06 8.6091e+07 1.0881e+07 23853 4.24818e+07 0 0.178916 0.992644 0.783848 8.54578e+07 0.00388467 1.83341e+07 9.07509e+06 1.84297e+07 226 1.84121e+07 1.22581e+07 0.00306947 1.85964e+07 50.2489 0.0118006 0.99572 0 50.1301 GTEX-1212Z-2026-SM-5N9EA 2 B1 6 pieces, well trimmed 5.7 Esophagus Esophagus - Muscularis 0004648 661 1101 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988605 296701 0.972807 0.9898 0.83589 22935 1 76 0.00393281 272 0 9.96237e+07 0.0269897 1.69536e+06 1.0065e+08 4.57409e+06 22959 4.95077e+07 0 0.136917 0.9898 0.827364 9.96237e+07 0.00404955 2.13434e+07 1.01243e+07 2.14737e+07 319 2.13426e+07 1.54604e+07 0.00399111 2.15877e+07 50.2855 0.0168441 0.990995 0 50.1521 GTEX-1212Z-2126-SM-5FQTM 1 B1 6 pieces 6.8 Esophagus Esophagus - Mucosa 0006920 662 1100 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988325 296391 0.975601 0.991911 0.799247 22638 1 76 0.00220572 154 0 7.38767e+07 0.0241468 664193 7.44792e+07 1.0409e+07 22659 3.66952e+07 0 0.176354 0.991911 0.792783 7.38767e+07 0.00405371 1.65601e+07 8.42165e+06 1.6614e+07 181 1.66241e+07 1.12991e+07 0.00312637 1.6809e+07 50.2764 0.00891784 0.995497 0 50.0812 GTEX-1212Z-2426-SM-5EQ5D 1 B1 2 pieces, several large central defects (poor fixation), ~10% fibrous 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 757 1005 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.99054 325281 0.973779 0.992995 0.795577 23831 1 76 0.00199618 209 0 8.38066e+07 0.0258842 407368 8.43978e+07 1.09204e+07 23857 4.16997e+07 0 0.178202 0.992995 0.790004 8.38066e+07 0.00288161 1.83285e+07 8.71708e+06 1.8451e+07 231 1.84716e+07 1.4637e+07 0.0024378 1.85027e+07 50.0421 0.00482676 0.995449 0 50.1664 GTEX-1212Z-2526-SM-5EGKP 1 B1 6 pieces, each with ~10% attached and intradermal fat, squamous epithelium measures 30-40 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 757 1005 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98512 364018 0.970647 0.989522 0.794868 23560 1 76 0.00189148 200 0 8.11528e+07 0.0290452 343556 8.2012e+07 7.82244e+06 23588 4.02759e+07 0 0.175779 0.989522 0.786539 8.11528e+07 0.00325675 1.7509e+07 9.47886e+06 1.7641e+07 196 1.77129e+07 1.39753e+07 0.00257108 1.77755e+07 50.0882 0.00418909 0.993925 0 50.1878 GTEX-1212Z-2626-SM-5YY8P 2 B1 2 pieces, ~10% attached fat on one piece, small portion of tendon 8.2 Muscle Muscle - Skeletal 0011907 761 1001 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993115 163401 0.983513 0.994133 0.866696 20617 1 76 0.00222932 271 0 1.15124e+08 0.0162387 1.23818e+06 1.15804e+08 5.18786e+06 20633 5.73757e+07 0 0.116817 0.994133 0.861611 1.15124e+08 0.00278289 2.46114e+07 1.3126e+07 2.482e+07 321 2.47427e+07 2.54247e+07 0.00250583 2.4795e+07 50.0528 0.0106921 0.995151 0 50.211 GTEX-1212Z-2726-SM-5EQ59 1 B1 4 pieces, includes up to ~30% predominantly attached fat 7.6 Nerve Nerve - Tibial 0001323 762 1000 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991182 231677 0.966113 0.993295 0.741883 23753 1 76 0.00209402 143 0 6.38303e+07 0.0335763 202613 6.42612e+07 7.84667e+06 23786 3.17429e+07 0 0.22423 0.993295 0.736909 6.38303e+07 0.00311761 1.40068e+07 6.07003e+06 1.41102e+07 143 1.41009e+07 9.90956e+06 0.00260473 1.41451e+07 50.0782 0.00315296 0.995407 0 50.184 GTEX-1212Z-2826-SM-59HJ5 1 B1 2 pieces, atherosclerosis, focal medial calcification 7.6 Blood Vessel Artery - Tibial 0007610 762 1000 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981188 252798 0.972137 0.98761 0.805682 22520 1 76 0.00244267 170 0 8.64423e+07 0.0274461 522841 8.75268e+07 1.68029e+07 22549 4.28172e+07 0 0.166455 0.98761 0.7957 8.64423e+07 0.00887616 1.8381e+07 7.90269e+06 1.85872e+07 182 1.87458e+07 1.60603e+07 0.00563849 1.87319e+07 49.9815 0.0059735 0.994033 0 50.2789 GTEX-1212Z-2926-SM-59HKV 1 B1 1 piece, adenohypophysis, neurohypophysis, and pars intermedia 6.7 Pituitary Pituitary 0000007 814 948 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.98187 286987 0.960519 0.987671 0.763417 25157 1 76 0.00254686 128 0 6.98695e+07 0.0391994 566121 7.07416e+07 1.26853e+07 25195 3.46451e+07 0 0.197101 0.987671 0.754005 6.98695e+07 0.00889306 1.46538e+07 1.04981e+07 1.47411e+07 154 1.48644e+07 9.58547e+06 0.00570132 1.48985e+07 50.0571 0.00800266 0.993472 0 50.1484 GTEX-12584-0004-SM-58Q8Q B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12584-0004-SM-5DWTJ B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12584-0004-SM-7DRPH B1 Blood Whole Blood 0013756 906 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12584-0005-SM-5N9GM B1 8.9 Blood Whole Blood 0013756 906 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.959999 482759 0.982367 0.961704 0.806881 19652 1 76 0.00439976 121 0 9.96089e+07 0.0166404 93063 1.03575e+08 5.27504e+06 19663 4.94854e+07 0 0.175486 0.961704 0.775981 9.96089e+07 0.00448262 2.35399e+07 1.45322e+08 2.3702e+07 154 2.3748e+07 2.71969e+07 0.00444112 2.36649e+07 49.9124 0.000898505 0.963408 0 50.1716 GTEX-12584-0008-SM-664MB B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 924 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992457 424991 0.976111 0.993158 0.858692 21382 1 76 0.00204233 281 0 1.02605e+08 0.0235517 406249 1.03312e+08 6.0795e+06 21406 5.10971e+07 0 0.117419 0.993158 0.852817 1.02605e+08 0.00287062 2.29413e+07 1.2955e+07 2.30323e+07 275 2.29729e+07 2.44407e+07 0.00245618 2.30824e+07 50.1189 0.00393227 0.99386 0 50.099 GTEX-12584-0011-R6a-SM-5NQ7C B1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 911 BP-43314 RNA isolation_PAXgene Tissue miRNA 09/09/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.990262 221154 0.975229 0.991766 0.833922 20821 1 76 0.00190314 367 0 7.52095e+07 0.0246901 8.932e+06 7.5834e+07 5.72087e+06 20826 3.74662e+07 0 0.141307 0.991766 0.827055 7.52095e+07 0.00292212 1.63267e+07 3.77119e+07 1.65753e+07 343 1.62538e+07 3.91854e+06 0.00241186 1.67679e+07 50.7785 0.117784 0.993269 0 50.3777 GTEX-12584-0126-SM-5EGKQ 1 B1 6 pieces; well trimmed; 10% intradermal fat 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 926 615 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.99124 282499 0.976953 0.993552 0.815464 23305 1 76 0.00190872 193 0 7.59693e+07 0.0227162 242721 7.64623e+07 6.55040e+06 23325 3.78088e+07 0 0.161489 0.993552 0.810206 7.59693e+07 0.00292989 1.66874e+07 8.63582e+06 1.67911e+07 181 1.68241e+07 1.46181e+07 0.00241812 1.68189e+07 49.9923 0.00317439 0.995865 0 50.1549 GTEX-12584-0226-SM-5EQL5 1 B1 2 pieces: 1 50% fibrous content, other 20% fibrous 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 926 615 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988917 246037 0.974453 0.991395 0.79776 22638 1 76 0.00214457 197 0 7.88787e+07 0.0252505 368118 7.95634e+07 1.04214e+07 22661 3.92414e+07 0 0.176693 0.991395 0.790895 7.88787e+07 0.00332389 1.72172e+07 1.0293e+07 1.73432e+07 203 1.72934e+07 1.22389e+07 0.00273276 1.74563e+07 50.2343 0.00462673 0.993873 0 50.1823 GTEX-12584-0326-SM-59HK2 1 B1 2 pieces: both have 20% internal fat; 1 has 20% external fat 7.4 Nerve Nerve - Tibial 0001323 934 607 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982685 236153 0.966144 0.988542 0.742006 24027 1 76 0.0025104 141 0 6.8237e+07 0.0335468 168736 6.90279e+07 1.12628e+07 24062 3.38197e+07 0 0.224138 0.988542 0.733504 6.8237e+07 0.00840294 1.48957e+07 7.08546e+06 1.50382e+07 141 1.51537e+07 1.09682e+07 0.00543921 1.51574e+07 50.0061 0.00244446 0.994399 0 50.238 GTEX-12584-0426-SM-5FQTT 1 B1 2 pieces; eccentric fibrofatty plaques; well trimmed 6.7 Blood Vessel Artery - Tibial 0007610 946 595 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989 207660 0.973669 0.992043 0.784736 21853 1 76 0.00231228 144 0 6.74445e+07 0.0259416 321072 6.79855e+07 9.52954e+06 21873 3.3521e+07 0 0.188933 0.992043 0.778492 6.74445e+07 0.00347989 1.46118e+07 6.5755e+06 1.47357e+07 151 1.47636e+07 1.19378e+07 0.00289429 1.47811e+07 50.0295 0.00472266 0.995087 0 50.2111 GTEX-12584-0526-SM-5FQTS 1 B1 2 pieces 8.6 Muscle Muscle - Skeletal 0011907 947 594 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991044 218928 0.982335 0.993976 0.84991 19855 1 76 0.00194717 135 0 6.62195e+07 0.0173951 272334 6.66209e+07 9.31867e+06 19866 3.29523e+07 0 0.132426 0.993976 0.844789 6.62195e+07 0.00323411 1.43558e+07 6.35764e+06 1.4366e+07 145 1.44096e+07 1.48386e+07 0.00258874 1.44979e+07 50.1527 0.00408782 0.996907 0 50.0176 GTEX-12584-0726-SM-5FQTK 1 B1 6 pieces; <10% intradermal fat; well trimmed 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 961 580 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988392 191462 0.97538 0.991539 0.773155 23628 1 76 0.00231433 144 0 6.83647e+07 0.024375 342682 6.89481e+07 1.01054e+07 23650 3.39984e+07 0 0.202224 0.991539 0.766614 6.83647e+07 0.00362164 1.51136e+07 7.91071e+06 1.51806e+07 156 1.52087e+07 1.08811e+07 0.00296591 1.52893e+07 50.132 0.00497015 0.994686 0 50.1106 GTEX-12584-0826-SM-5FQSK 1 B1 2 pieces 6.5 Thyroid Thyroid 0002046 971 570 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98809 315026 0.962679 0.991487 0.660231 24798 1 76 0.00240144 152 0 8.35841e+07 0.0370622 256884 8.43018e+07 1.04218e+07 24853 4.15318e+07 0 0.302449 0.991487 0.65461 8.35841e+07 0.00389461 1.82621e+07 9.09928e+06 1.83749e+07 167 1.84462e+07 1.02881e+07 0.00314547 1.84623e+07 50.0218 0.00304719 0.994884 0 50.1541 GTEX-12584-0926-SM-5FQTN 1 B1 2 pieces 6.2 Heart Heart - Left Ventricle 0006566 979 562 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989077 180287 0.984988 0.992218 0.825534 20440 1 76 0.0021005 266 0 7.53276e+07 0.0148917 2.88856e+06 7.59184e+07 1.09667e+07 20453 3.74749e+07 0 0.159454 0.992218 0.81911 7.53276e+07 0.00357283 1.71588e+07 2.62297e+07 1.64372e+07 278 1.65674e+07 6.83195e+06 0.00283434 1.72139e+07 50.9569 0.0380482 0.995359 0 48.9261 GTEX-12584-1026-SM-59HK3 1 B1 2 pieces: 1 with 10% internal fat, 1 with 5% internal fat 6.3 Heart Heart - Atrial Appendage 0006631 986 555 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982016 281895 0.975758 0.988178 0.774219 23254 1 76 0.00253818 154 0 7.92383e+07 0.0239946 1.44954e+06 8.01863e+07 1.58047e+07 23282 3.92753e+07 0 0.201539 0.988178 0.765066 7.92383e+07 0.00858005 1.75297e+07 1.12961e+07 1.75275e+07 180 1.76682e+07 1.06827e+07 0.00554028 1.7832e+07 50.2307 0.0180772 0.99434 0 49.9969 GTEX-12584-1426-SM-5EGJ9 1 B1 2 pieces 7.1 Lung Lung 0008952 1006 535 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985482 298761 0.976435 0.98849 0.724513 23677 1 76 0.00233727 166 0 8.45069e+07 0.0228373 243516 8.5491e+07 7.77223e+06 23711 4.19811e+07 0 0.251922 0.98849 0.716174 8.45069e+07 0.00332695 1.86867e+07 9.65848e+06 1.89271e+07 185 1.8983e+07 1.32759e+07 0.00283061 1.88742e+07 49.8563 0.00284844 0.991498 0 50.3196 GTEX-12584-2126-SM-5FQUM 1 B1 2 pieces: one with 10% fibrous content 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1023 518 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.984078 269470 0.974877 0.988011 0.801272 23295 1 76 0.00232185 193 0 7.88435e+07 0.0248735 873022 7.98002e+07 1.11025e+07 23314 3.9143e+07 0 0.173606 0.988011 0.791666 7.88435e+07 0.00408223 1.74578e+07 1.30213e+07 1.74047e+07 208 1.7397e+07 1.13102e+07 0.00319854 1.77624e+07 50.5196 0.0109401 0.991945 0 49.9238 GTEX-12584-3126-SM-5EGKR 1 B1 1 pieces: anterior and posterior 6.5 Pituitary Pituitary 0000007 1107 434 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989455 301981 0.963201 0.99199 0.743415 25143 1 76 0.0019397 134 0 7.32741e+07 0.0365433 289280 7.38658e+07 6.34531e+06 25175 3.64558e+07 0 0.219786 0.99199 0.73746 7.32741e+07 0.0029559 1.58838e+07 1.23201e+07 1.59758e+07 161 1.60154e+07 1.1062e+07 0.0024465 1.6023e+07 50.0118 0.00391629 0.994525 0 50.1444 GTEX-12696-0002-SM-5SI6U B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 470 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989979 625275 0.964744 0.992352 0.826608 20717 1 76 0.00217483 176 0 8.27587e+07 0.0339636 413765 8.33965e+07 8.37094e+06 20736 4.11373e+07 0 0.138136 0.992352 0.820286 8.27587e+07 0.00326894 1.82271e+07 1.64432e+07 1.83186e+07 181 1.83358e+07 1.87919e+07 0.00272057 1.84112e+07 50.1025 0.00496142 0.994725 0 50.1253 GTEX-12696-0003-SM-5DWTK B1 Blood Whole Blood 0013756 470 BP-40801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12696-0005-SM-5LZYS B1 9.2 Blood Whole Blood 0013756 470 BP-40739 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.988878 443576 0.972843 0.990111 0.751622 19619 1 76 0.00353397 110 0 7.1356e+07 0.0266215 188084 7.20686e+07 4.01394e+06 19638 3.54721e+07 0 0.221221 0.990111 0.744189 7.1356e+07 0.00407941 1.59237e+07 3.93046e+07 1.61685e+07 129 1.62183e+07 1.3898e+07 0.00380635 1.59714e+07 49.6165 0.00260979 0.991344 0 50.3813 GTEX-12696-0008-SM-5TDBX B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 599 BP-45532 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987561 449932 0.978611 0.992086 0.869113 21239 1 76 0.0019307 214 0 8.93836e+07 0.0211216 236195 9.00966e+07 1.16943e+07 21251 4.43925e+07 0 0.109498 0.992086 0.862235 8.93836e+07 0.00371013 1.99898e+07 1.26321e+07 2.00909e+07 209 2.01954e+07 2.25124e+07 0.00281636 2.02893e+07 50.1159 0.00262158 0.996611 0 50.1262 GTEX-12696-0126-SM-5EQ4L 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 485 1210 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989215 306558 0.974029 0.99245 0.767898 23970 1 76 0.00210108 181 0 8.45873e+07 0.0257326 534182 8.52308e+07 1.02413e+07 24007 4.20402e+07 0 0.206131 0.99245 0.7621 8.45873e+07 0.00329784 1.87435e+07 9.35708e+06 1.88331e+07 201 1.88417e+07 1.3638e+07 0.00269751 1.89967e+07 50.2049 0.00626748 0.995686 0 50.1192 GTEX-12696-0226-SM-5EGL3 1 B1 2 pieces, mild-moderate autolysis, focally approaching score '2'--spermatogenesis present, appears reduced 6.6 Testis Testis 0000473 489 1206 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988013 336725 0.925317 0.990828 0.697816 33030 1 76 0.00207655 153 0 7.89606e+07 0.0743969 665318 7.96915e+07 6.90289e+06 33104 3.92687e+07 0 0.2275 0.990828 0.691416 7.89606e+07 0.00310711 1.63252e+07 1.19509e+07 1.63877e+07 161 1.64421e+07 1.16404e+07 0.00259036 1.64683e+07 50.0398 0.00834867 0.993644 0 50.0955 GTEX-12696-0326-SM-5EGL4 1 B1 2 pieces, regressive changes 7.6 Thyroid Thyroid 0002046 497 1198 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985901 317603 0.96554 0.990124 0.748775 24671 1 76 0.00195779 164 0 8.64927e+07 0.0341873 165877 8.73555e+07 8.63763e+06 24716 4.29533e+07 0 0.216765 0.990124 0.741379 8.64927e+07 0.00306037 1.87045e+07 8.35103e+06 1.89027e+07 194 1.90049e+07 1.45961e+07 0.00250673 1.89439e+07 49.9196 0.00189887 0.994346 0 50.2635 GTEX-12696-0326-SM-DK2K4 1 B1 2 pieces, regressive changes Thyroid Thyroid 0002046 497 1198 BP-51565 DNA Extraction from Paxgene-derived Lysate Plate Based 04/14/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-12696-0326-SM-DLIOI 1 B1 2 pieces, regressive changes Thyroid Thyroid 0002046 497 1198 BP-51565 DNA Extraction from Paxgene-derived Lysate Plate Based 04/14/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-12696-0426-SM-5EGL5 1 B1 6 pieces, minimal atherosis, adherent serosa up to ~0.5mm 7.2 Blood Vessel Artery - Aorta 0001496 501 1194 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988742 277894 0.973356 0.991365 0.781845 22686 1 76 0.0019975 140 0 7.34528e+07 0.0262877 206302 7.40926e+07 5.69604e+06 22712 3.65167e+07 0 0.191511 0.991365 0.775093 7.34528e+07 0.00303412 1.58654e+07 6.10347e+06 1.60711e+07 162 1.60823e+07 1.30951e+07 0.00251444 1.60383e+07 49.9315 0.00278438 0.993988 0 50.322 GTEX-12696-0526-SM-5EQ3Z 1 B1 2 pieces, mild (20%) occlusive atherosis, focally calcified, encircled 6.2 Blood Vessel Artery - Coronary 0001621 525 1170 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988811 281071 0.972043 0.991657 0.794985 22522 1 76 0.00206608 164 0 8.61305e+07 0.0275778 284502 8.68551e+07 1.10338e+07 22547 4.28102e+07 0 0.177058 0.991657 0.788353 8.61305e+07 0.00326115 1.84512e+07 8.18703e+06 1.862e+07 200 1.86216e+07 1.58522e+07 0.0026619 1.86874e+07 50.0883 0.00327559 0.994504 0 50.2278 GTEX-12696-0626-SM-5EGGD 1 B1 2 pieces, all cortex, good specimens, minimal fat 7.2 Adrenal Gland Adrenal Gland 0002369 514 1181 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981612 223664 0.967422 0.987072 0.795373 23464 1 76 0.00246893 131 0 6.51676e+07 0.0323308 654150 6.60211e+07 1.12411e+07 23486 3.23283e+07 0 0.172049 0.987072 0.78509 6.51676e+07 0.00563208 1.40975e+07 8.99157e+06 1.42253e+07 147 1.43242e+07 1.03737e+07 0.00404176 1.43294e+07 50.009 0.00990819 0.992532 0 50.2255 GTEX-12696-0826-SM-5EGGE 1 B1 2 pieces, moderate congestion; no significant steatosis 7 Liver Liver 0001114 519 1176 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985727 196329 0.975666 0.989988 0.814138 20110 1 76 0.00246678 126 0 6.24696e+07 0.0234205 515867 6.31014e+07 8.96553e+06 20127 3.10113e+07 0 0.161528 0.989988 0.805987 6.24696e+07 0.00551516 1.36262e+07 1.15721e+07 1.35379e+07 148 1.35974e+07 9.50579e+06 0.00398441 1.38087e+07 50.3855 0.0081752 0.994249 0 49.8374 GTEX-12696-0926-SM-5FQTV 1 B1 6 pieces, all cortex; glomeruli present 7.8 Kidney Kidney - Cortex 0001225 521 1174 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988527 281996 0.970547 0.99142 0.811145 23620 1 76 0.00237111 156 0 7.04608e+07 0.0292285 1.23927e+06 7.10706e+07 9.38508e+06 23650 3.50459e+07 0 0.159402 0.99142 0.804185 7.04608e+07 0.00378682 1.54589e+07 8.40991e+06 1.54536e+07 175 1.54902e+07 1.06385e+07 0.0030769 1.56097e+07 50.1921 0.0174372 0.994312 0 49.9915 GTEX-12696-1026-SM-5FQUV 2 B1 2 pieces, moderate congestion 7.6 Lung Lung 0008952 524 1171 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986564 256404 0.972826 0.990547 0.786685 24454 1 76 0.00260485 139 0 7.13813e+07 0.0263741 196453 7.20626e+07 1.05532e+07 24483 3.54396e+07 0 0.186141 0.990547 0.779249 7.13813e+07 0.00393834 1.57174e+07 7.97924e+06 1.58151e+07 156 1.58886e+07 1.24058e+07 0.00326892 1.59125e+07 50.0376 0.00272615 0.994529 0 50.1549 GTEX-12696-1126-SM-5FQTI 1 B1 2 pieces, mild interstitial fibrosis, no infarcts noted 8.6 Heart Heart - Left Ventricle 0006566 529 1166 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991879 215094 0.982657 0.994371 0.857789 20779 1 76 0.0022099 196 0 7.62408e+07 0.0171104 1.06234e+06 7.66724e+07 1.03985e+07 20790 3.79629e+07 0 0.124868 0.994371 0.852961 7.62408e+07 0.00333007 1.70259e+07 1.39281e+07 1.6466e+07 229 1.66087e+07 1.36673e+07 0.00276858 1.704e+07 50.6409 0.0138556 0.996863 0 49.1642 GTEX-12696-1226-SM-5FQSM 1 B1 2 pieces, no abnormalities 7.8 Heart Heart - Atrial Appendage 0006631 533 1162 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990746 275058 0.977969 0.993613 0.810408 22577 1 76 0.00229452 268 0 8.87689e+07 0.0217856 1.23166e+06 8.93394e+07 1.24828e+07 22597 4.417e+07 0 0.167561 0.993613 0.805232 8.87689e+07 0.00349999 1.91238e+07 1.74012e+07 1.88513e+07 263 1.883e+07 1.37893e+07 0.00289552 1.93749e+07 50.7132 0.0137863 0.99648 0 49.6412 GTEX-12696-1326-SM-5FQTJ 1 B1 6 pieces, squamous mucosa ~20% thickness, prominent submucosal glands noted, encircled 8.4 Esophagus Esophagus - Mucosa 0006920 534 1161 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98913 265506 0.973998 0.992147 0.792735 22900 1 76 0.00235982 161 0 7.74001e+07 0.0256419 233012 7.80128e+07 1.16233e+07 22921 3.84938e+07 0 0.181262 0.992147 0.78651 7.74001e+07 0.0036994 1.72895e+07 1.06645e+07 1.73785e+07 174 1.74237e+07 1.40251e+07 0.00302757 1.7471e+07 50.0678 0.00298684 0.995163 0 50.1284 GTEX-12696-1426-SM-5EGJ6 1 B1 6 pieces, all muscularis, good specimens 7.1 Esophagus Esophagus - Muscularis 0004648 538 1157 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989264 403926 0.964529 0.99234 0.78475 23306 1 76 0.00196928 205 0 8.3268e+07 0.0352332 467333 8.39108e+07 7.97554e+06 23335 4.1401e+07 0 0.179779 0.99234 0.778739 8.3268e+07 0.00296677 1.77568e+07 1.31223e+07 1.79596e+07 222 1.79949e+07 1.37518e+07 0.00246648 1.79602e+07 49.9518 0.00556941 0.995416 0 50.2839 GTEX-12696-1526-SM-5EGL6 1 B1 6 pieces, all muscularis, good specimens 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 545 1150 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987351 251082 0.967791 0.990854 0.76434 22960 1 76 0.00203639 136 0 7.23089e+07 0.0319994 303191 7.29764e+07 6.92301e+06 22992 3.59197e+07 0 0.20345 0.990854 0.75735 7.23089e+07 0.00326786 1.55183e+07 6.43785e+06 1.56831e+07 160 1.5688e+07 1.14835e+07 0.00264995 1.57529e+07 50.1031 0.00415465 0.994357 0 50.2641 GTEX-12696-1726-SM-5EQLH 1 B1 6 pieces, mucosa well preserved, ~1mm thick, 30-50% thickness 6.8 Stomach Stomach 0000945 555 1140 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.971603 141521 0.983592 0.973671 0.848965 21076 1 76 0.00216163 372 0 6.72982e+07 0.0156706 466566 6.9118e+07 9.8982e+06 21088 3.34862e+07 0 0.134627 0.973671 0.826613 6.72982e+07 0.00326266 1.55648e+07 1.21108e+08 1.60415e+07 242 1.60235e+07 1.96781e+07 0.00271098 1.57218e+07 49.5248 0.00675028 0.975739 0 50.754 GTEX-12696-1826-SM-5EGJS 1 B1 2 pieces; ~10% fibrosvascular tissue (rep delineated), moderate mesothelial prominence/hyperplasia 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 557 1138 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990634 245338 0.979426 0.993315 0.818622 22513 1 76 0.00200982 205 0 7.71023e+07 0.0203132 531073 7.76212e+07 7.20071e+06 22531 3.8362e+07 0 0.160803 0.993315 0.81315 7.71023e+07 0.00298388 1.7008e+07 1.30662e+07 1.70579e+07 218 1.70858e+07 1.29431e+07 0.00249553 1.71702e+07 50.1232 0.00684185 0.995996 0 50.0732 GTEX-12696-1926-SM-5EGJT 1 B1 6 pieces, all muscularis 6.4 Colon Colon - Sigmoid 0001159 563 1132 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989823 266461 0.972544 0.992739 0.821412 22890 1 76 0.00188986 165 0 7.30652e+07 0.0272146 369665 7.35996e+07 6.26342e+06 22909 3.63227e+07 0 0.151131 0.992739 0.815448 7.30652e+07 0.00315997 1.57462e+07 6.76981e+06 1.58913e+07 182 1.58853e+07 1.22211e+07 0.00252305 1.59509e+07 50.1031 0.00502265 0.995655 0 50.2292 GTEX-12696-2226-SM-5EQ65 2 B1 2 piecesm hyperplastic glandular pattern; glandular epithelium moderately/markedly autolyzed 6.7 Prostate Prostate 0002367 571 1124 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990222 217094 0.972218 0.993153 0.819126 22095 1 76 0.00192779 131 0 6.16841e+07 0.0275512 282745 6.21093e+07 8.2293e+06 22111 3.06731e+07 0 0.153092 0.993153 0.813517 6.16841e+07 0.00304608 1.32864e+07 5.57054e+06 1.34355e+07 145 1.34169e+07 1.11059e+07 0.00248529 1.34776e+07 50.1129 0.00455238 0.996085 0 50.2789 GTEX-12696-2426-SM-5EQ6H 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~30 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 600 1095 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988861 338032 0.97353 0.99151 0.79587 22870 1 76 0.00211217 173 0 7.29389e+07 0.0262324 389403 7.35634e+07 9.10666e+06 22897 3.62791e+07 0 0.17766 0.99151 0.789113 7.29389e+07 0.00320224 1.60248e+07 8.32579e+06 1.62172e+07 172 1.62117e+07 1.24228e+07 0.00265575 1.62155e+07 50.0059 0.00529343 0.994159 0 50.2985 GTEX-12696-2526-SM-5EQLN 0 B1 2 pieces; 10-20% fibro/fascial tissue, rep. delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 601 1094 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992115 234619 0.977162 0.994126 0.821546 22595 1 76 0.0021189 206 0 8.44711e+07 0.0225486 667893 8.49702e+07 1.03484e+07 22616 4.20541e+07 0 0.155616 0.994126 0.816721 8.44711e+07 0.00314246 1.85283e+07 1.02976e+07 1.86334e+07 245 1.85985e+07 1.40285e+07 0.00262965 1.8725e+07 50.1694 0.00786032 0.996138 0 50.1413 GTEX-12696-2626-SM-5EQ44 0 B1 2 pieces, minimal adherent fat, clean specimens 7.1 Nerve Nerve - Tibial 0001323 605 1090 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991187 261579 0.968171 0.993429 0.745439 23345 1 76 0.00207428 161 0 6.94058e+07 0.0315395 259012 6.98649e+07 7.74192e+06 23384 3.4529e+07 0 0.222732 0.993429 0.740541 6.94058e+07 0.00315087 1.52324e+07 6.49942e+06 1.53981e+07 156 1.53889e+07 1.07987e+07 0.00261136 1.5388e+07 49.9986 0.00370733 0.995671 0 50.2706 GTEX-12696-2726-SM-5FQUL 0 B1 2 pieces, focal adherent fibrous tissue, delineated, good clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 611 1084 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989299 229457 0.977514 0.992653 0.847825 21051 1 76 0.00217741 158 0 7.10948e+07 0.0221144 263254 7.1621e+07 1.05574e+07 21062 3.53429e+07 0 0.12969 0.992653 0.841595 7.10948e+07 0.00350054 1.53576e+07 6.14852e+06 1.54614e+07 165 1.54838e+07 1.44276e+07 0.00283674 1.55642e+07 50.1295 0.00367565 0.996006 0 50.1683 GTEX-12696-2826-SM-5FQTY 0 B1 2 pieces; ~10% interstitial/adherent fibroadipose tissue, rep. delineated 7.7 Muscle Muscle - Skeletal 0011907 614 1081 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990406 239819 0.982098 0.993369 0.864203 19998 1 76 0.00212121 206 0 7.92654e+07 0.0176496 596417 7.97946e+07 1.08001e+07 20009 3.94445e+07 0 0.117895 0.993369 0.858472 7.92654e+07 0.00344629 1.71615e+07 1.25228e+07 1.69515e+07 227 1.69587e+07 1.56769e+07 0.00278177 1.73675e+07 50.5954 0.00747441 0.996332 0 49.6921 GTEX-12696-2926-SM-5FQTG 1 B1 2 pieces, no abnormalities 7.9 Brain Brain - Cortex 0001870 750 945 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.98715 263303 0.962333 0.99121 0.777309 23708 1 76 0.00246233 209 0 7.87051e+07 0.0374466 2.00724e+06 7.9403e+07 1.10694e+07 23742 3.91011e+07 0 0.185024 0.99121 0.770476 7.87051e+07 0.00403907 1.72355e+07 1.01589e+07 1.74208e+07 213 1.73769e+07 9.46408e+06 0.00324747 1.75761e+07 50.2849 0.0252792 0.995271 0 50.2672 GTEX-12696-3026-SM-5FQTU 2 B1 2 pieces, no abnormalities, poorly preserved 6.3 Brain Brain - Cerebellum 0002037 755 940 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987445 547133 0.938256 0.990878 0.754184 23507 1 76 0.0026701 151 0 6.62165e+07 0.0615046 3.47168e+06 6.68261e+07 8.82786e+06 23527 3.29134e+07 0 0.184073 0.990878 0.747304 6.62165e+07 0.00439974 1.42068e+07 2.79966e+07 1.42911e+07 169 1.42704e+07 6.07143e+06 0.00353193 1.44355e+07 50.2876 0.051951 0.99431 0 50.1479 GTEX-12696-3126-SM-5FQUX 1 B1 1 piece, ~10% neurohypophysis (delineated); ~40% adenohypophysis (ensquared); rest is dura (pink/red tissue) 7.7 Pituitary Pituitary 0000007 757 938 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98892 248588 0.965113 0.991887 0.734704 24849 1 76 0.00239615 133 0 7.15407e+07 0.0346381 255569 7.21259e+07 1.03115e+07 24888 3.55771e+07 0 0.230409 0.991887 0.728743 7.15407e+07 0.00360269 1.56039e+07 1.04216e+07 1.55862e+07 146 1.56481e+07 1.11315e+07 0.00299761 1.57429e+07 50.1511 0.00354337 0.994854 0 49.9716 GTEX-1269C-0003-SM-5S2PB B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 626 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992622 960172 0.955037 0.993692 0.840115 19953 1 76 0.00187629 157 0 6.93584e+07 0.0439211 605250 6.97987e+07 4.15399e+06 19964 3.45366e+07 0 0.114922 0.993692 0.834815 6.93584e+07 0.00249882 1.50464e+07 1.80687e+07 1.53416e+07 163 1.52872e+07 1.48833e+07 0.00218722 1.51806e+07 49.825 0.00867137 0.994762 0 50.4857 GTEX-1269C-0005-SM-5N9CJ B1 8.9 Blood Whole Blood 0013756 626 BP-40859 RNA isolation_PAXgene Blood RNA (Manual) 07/16/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.969802 303577 0.984169 0.970804 0.801436 17436 1 76 0.00258801 94 0 7.89719e+07 0.015184 143232 8.13469e+07 3.87811e+06 17441 3.93398e+07 0 0.182733 0.970804 0.778037 7.89719e+07 0.00326972 1.87146e+07 1.13524e+08 1.88965e+07 127 1.8887e+07 2.10377e+07 0.00292851 1.88141e+07 49.9033 0.00176076 0.971807 0 50.2419 GTEX-1269C-0008-SM-5TDBY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 265 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.991893 380030 0.980307 0.994434 0.880316 20858 1 76 0.00187904 214 0 8.97431e+07 0.019394 453960 9.02454e+07 1.02202e+07 20876 4.46719e+07 0 0.0999914 0.994434 0.875416 8.97431e+07 0.00341237 2.01531e+07 1.18521e+07 2.02447e+07 242 2.02773e+07 2.28022e+07 0.00264375 2.03479e+07 50.0868 0.00503028 0.996974 0 50.1135 GTEX-1269C-0011-R4b-SM-5P9ES B1, A1 5.7 Brain Brain - Amygdala 0001876 662 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.985275 274287 0.959808 0.984048 0.871978 17039 1 76 0.00335239 259 0 7.11618e+07 0.0400731 1.77593e+07 7.23154e+07 3.49456e+06 17045 3.53159e+07 0 0.0878306 0.984048 0.858068 7.11618e+07 0.00414051 1.55555e+07 2.27853e+07 1.64496e+07 326 1.5885e+07 1.64027e+06 0.00374694 1.59862e+07 50.1587 0.245582 0.982822 0 51.3968 GTEX-1269C-0126-SM-5EQ5L 1 B1 6 pieces, well trimmed with limited internal fat (up to 10%) 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 758 827 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990425 256237 0.976391 0.993025 0.769945 22456 1 76 0.00211113 162 0 6.52505e+07 0.0233628 326649 6.57087e+07 7.75872e+06 22484 3.24565e+07 0 0.206445 0.993025 0.764575 6.52505e+07 0.00325155 1.42412e+07 7.46972e+06 1.43726e+07 150 1.4396e+07 1.05034e+07 0.00267985 1.43777e+07 49.9682 0.00497116 0.995626 0 50.2296 GTEX-1269C-0226-SM-5EGKS 2 B1 2 pieces, ~5-10% of each is fat and fibrous/vascular tissue, regressive change 6 Thyroid Thyroid 0002046 771 814 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988674 297522 0.969449 0.991126 0.71246 24494 1 76 0.00207383 157 0 7.78216e+07 0.0302703 669183 7.85184e+07 6.57874e+06 24530 3.8685e+07 0 0.256988 0.991126 0.706138 7.78216e+07 0.00327758 1.70876e+07 8.35829e+06 1.72796e+07 181 1.72689e+07 9.36713e+06 0.00267422 1.72818e+07 50.0186 0.00852263 0.993579 0 50.2792 GTEX-1269C-0626-SM-5FQSS 2 B1 2 pieces, mild macrovesicular steatosis, passive congestion 6.2 Liver Liver 0001114 794 791 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986309 256988 0.971471 0.989504 0.825757 21331 1 76 0.00242792 198 0 7.5694e+07 0.0276714 943556 7.64969e+07 9.81613e+06 21344 3.7597e+07 0 0.145713 0.989504 0.81709 7.5694e+07 0.00400888 1.66544e+07 1.50461e+07 1.66428e+07 225 1.65607e+07 9.06727e+06 0.00321585 1.69685e+07 50.608 0.0123346 0.992699 0 49.9825 GTEX-1269C-0826-SM-5N9EM 1 B1 2 pieces 5.7 Heart Heart - Left Ventricle 0006566 798 787 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986203 281863 0.985365 0.987647 0.826237 19911 1 76 0.00402479 370 0 1.14606e+08 0.0145673 1.06105e+07 1.1604e+08 5.6335e+06 19919 5.70336e+07 0 0.159128 0.987647 0.816031 1.14606e+08 0.00401766 2.45207e+07 6.55235e+07 2.51943e+07 335 2.46672e+07 6.32447e+06 0.00402123 2.51804e+07 50.5148 0.0914389 0.989092 0 50.6774 GTEX-1269C-0926-SM-5FQSR 1 B1 2 pieces, edema, hemorrhage, focus of cartilage 7.5 Lung Lung 0008952 800 785 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988891 228039 0.978811 0.992059 0.761043 23598 1 76 0.00250771 166 0 7.90435e+07 0.020689 555420 7.96762e+07 1.09855e+07 23629 3.92915e+07 0 0.217768 0.992059 0.755 7.90435e+07 0.00392444 1.75071e+07 8.95044e+06 1.76784e+07 176 1.77125e+07 1.32712e+07 0.00321381 1.77095e+07 49.9958 0.00697096 0.995228 0 50.2434 GTEX-1269C-1026-SM-5N9EY 1 B1 6 pieces 5.7 Esophagus Esophagus - Mucosa 0006920 804 781 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98817 344506 0.978542 0.989557 0.859998 21616 1 76 0.00411308 270 0 9.91439e+07 0.0210796 1.93644e+06 1.0019e+08 4.91303e+06 21625 4.92745e+07 0 0.118544 0.989557 0.851016 9.91439e+07 0.00417657 2.2355e+07 1.33566e+07 2.24728e+07 317 2.24351e+07 1.56405e+07 0.00414478 2.25309e+07 50.1065 0.0193276 0.990943 0 50.1314 GTEX-1269C-1826-SM-5N9E1 1 B1 2 pieces, multiple corpora albicantia 5.7 Ovary Ovary 0000992 827 758 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984677 414709 0.964035 0.986059 0.742968 24995 1 76 0.00399825 284 0 1.15024e+08 0.0357286 413140 1.1665e+08 5.39287e+06 25041 5.71521e+07 0 0.221067 0.986059 0.73261 1.15024e+08 0.00408438 2.50037e+07 1.60382e+07 2.51902e+07 280 2.51454e+07 2.04944e+07 0.00404125 2.5217e+07 50.0711 0.0035417 0.987441 0 50.1858 GTEX-1269C-1826-SM-DO3X2 1 B1 2 pieces, multiple corpora albicantia Ovary Ovary 0000992 827 758 BP-53662 DNA Extraction from Paxgene-derived Lysate Plate Based 06/09/2014 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1269C-2026-SM-DK2JN 1 B1 2 pieces, includes both endometrium and myometrium Uterus Uterus 0000995 834 751 BP-49274 DNA Extraction from Paxgene-derived Lysate Plate Based 02/10/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1269C-2026-SM-DLIOA 1 B1 2 pieces, includes both endometrium and myometrium Uterus Uterus 0000995 834 751 BP-49274 DNA Extraction from Paxgene-derived Lysate Plate Based 02/10/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1269C-2426-SM-5FQSN 1 B1 2 pieces, one piece is predominantly fatty, second is 50% fat/50% fibrous stroma and ductal elements 7.2 Breast Breast - Mammary Tissue 0008367 853 732 BP-44114 RNA Extraction from Paxgene-derived Lysate Plate Based 09/30/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988182 262056 0.970398 0.991384 0.728297 25510 1 76 0.00251716 207 0 8.64368e+07 0.0289497 506802 8.7188e+07 1.1839e+07 25557 4.29567e+07 0 0.242101 0.991384 0.722022 8.64368e+07 0.00385233 1.91123e+07 9.74995e+06 1.91667e+07 215 1.92179e+07 1.23838e+07 0.00318259 1.93228e+07 50.136 0.00581275 0.994586 0 50.0711 GTEX-1269C-2526-SM-5EGJ3 1 B1 6 pieces, 5-10% predominantly internal fat, squamous epithelium measures ~45 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 985 600 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.984319 263250 0.975315 0.987035 0.828615 23494 1 76 0.00191077 244 0 8.23142e+07 0.0244007 327256 8.33954e+07 7.31024e+06 23520 4.09475e+07 0 0.146699 0.987035 0.817873 8.23142e+07 0.00288098 1.78606e+07 9.14255e+06 1.80319e+07 238 1.80786e+07 1.55823e+07 0.00239454 1.80235e+07 49.9236 0.00392415 0.989752 0 50.2387 GTEX-1269C-2626-SM-5EQ5C 1 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 986 599 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992156 261531 0.982056 0.994385 0.860189 19854 1 76 0.00176935 156 0 7.3866e+07 0.0177319 1.06894e+06 7.42831e+07 9.05462e+06 19867 3.67774e+07 0 0.121868 0.994385 0.855358 7.3866e+07 0.0026114 1.61696e+07 1.01462e+07 1.62217e+07 191 1.62294e+07 1.5264e+07 0.00218943 1.63074e+07 50.1198 0.01439 0.996613 0 50.0804 GTEX-1269C-2726-SM-5EGJ4 1 B1 2 pieces, 30-40% fibrovascular tissue 7 Adipose Tissue Adipose - Subcutaneous 0002190 987 598 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988561 279615 0.971365 0.992033 0.801284 23736 1 76 0.00198249 209 0 8.40017e+07 0.0282682 561436 8.46764e+07 8.06012e+06 23763 4.17525e+07 0 0.17008 0.992033 0.794901 8.40017e+07 0.00298364 1.83056e+07 9.41835e+06 1.84778e+07 245 1.85521e+07 1.40246e+07 0.00248131 1.85039e+07 49.935 0.00663037 0.995505 0 50.234 GTEX-1269C-2826-SM-5EQ5O 1 B1 2 pieces, medial cacific sclerosis (Monckeberg's arteriosclerosis), well trimmed 6.6 Blood Vessel Artery - Tibial 0007610 987 598 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988733 226437 0.975399 0.991858 0.82319 21201 1 76 0.00196976 159 0 7.0572e+07 0.0242023 596775 7.11513e+07 9.56188e+06 21216 3.50667e+07 0 0.152209 0.991858 0.816488 7.0572e+07 0.00298018 1.51215e+07 6.81329e+06 1.52516e+07 167 1.52343e+07 1.32028e+07 0.00247338 1.53503e+07 50.1896 0.0083874 0.994984 0 50.2142 GTEX-1269C-3126-SM-5EGI6 1 B1 2 pieces 6.1 Brain Brain - Cerebellum 0002037 1041 544 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.983624 298899 0.952453 0.988774 0.784891 22579 1 76 0.00247955 121 0 5.88273e+07 0.0473236 2.56684e+06 5.94952e+07 8.7326e+06 22591 2.91928e+07 0 0.167562 0.988774 0.77608 5.88273e+07 0.00576188 1.27812e+07 1.71575e+07 1.2689e+07 158 1.26793e+07 4.78573e+06 0.00411216 1.30551e+07 50.7301 0.0431437 0.993924 0 49.8189 GTEX-1269C-3226-SM-5EGKT 1 B1 1 piece, adenohypophysis 6.7 Pituitary Pituitary 0000007 1043 542 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988466 262775 0.970088 0.990593 0.799196 23636 1 76 0.00196335 267 0 7.80529e+07 0.0296852 3.14332e+06 7.87941e+07 6.75072e+06 23663 3.88622e+07 0 0.170892 0.990593 0.791678 7.80529e+07 0.00287599 1.72721e+07 1.28083e+07 1.73301e+07 258 1.72761e+07 8.91334e+06 0.00241869 1.74812e+07 50.2951 0.0398929 0.992721 0 50.0837 GTEX-12BJ1-0001-SM-5DU4Z B1 Blood Whole Blood 0013756 1178 BP-40985 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12BJ1-0001-SM-7DRPO B1 Blood Whole Blood 0013756 1178 BP-40985 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12BJ1-0003-SM-5SI6V B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1178 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991645 1.32294e+06 0.961293 0.993903 0.822525 21552 1 76 0.00210097 174 0 8.41749e+07 0.0381025 469618 8.46912e+07 7.86974e+06 21575 4.18933e+07 0 0.138768 0.993903 0.81751 8.41749e+07 0.00318231 1.85832e+07 1.25798e+07 1.86698e+07 190 1.87057e+07 1.86788e+07 0.00264041 1.8735e+07 50.0392 0.00554506 0.996161 0 50.1162 GTEX-12BJ1-0006-SM-5SIB5 B1 9 Blood Whole Blood 0013756 1178 BP-41053 RNA isolation_PAXgene Blood RNA (Manual) 07/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987666 830080 0.955432 0.990638 0.801174 19368 1 76 0.0021912 203 0 9.21606e+07 0.0440348 325105 9.30316e+07 1.05703e+07 19384 4.58475e+07 0 0.154258 0.990638 0.793673 9.21606e+07 0.00341847 2.0211e+07 6.21236e+07 2.03684e+07 218 2.04456e+07 1.96572e+07 0.00280299 2.04096e+07 49.9559 0.00349457 0.99361 0 50.194 GTEX-12BJ1-0008-SM-5TDBZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 300 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990661 558880 0.976456 0.993624 0.883291 20935 1 76 0.00188369 281 0 9.89433e+07 0.0232736 289192 9.95782e+07 1.3e+07 20945 4.92248e+07 0 0.0931653 0.993624 0.877659 9.89433e+07 0.00346979 2.20795e+07 1.71401e+07 2.21494e+07 272 2.21975e+07 2.50962e+07 0.00267438 2.23256e+07 50.1439 0.00290417 0.996588 0 50.0791 GTEX-12BJ1-0126-SM-5LU9P 1 B1 6 pieces, foci of atherosis, up to 1.5 mm thick 7.3 Blood Vessel Artery - Aorta 0001496 102 1023 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 EXCLUDE 0.992053 189860 0.9751 0.993902 0.819715 21770 1 76 0.00436103 126 0 5.96592e+07 0.0246251 594290 6.00252e+07 5.22842e+06 21783 2.96848e+07 0 0.155385 0.993902 0.814716 5.96592e+07 0.00356945 1.30488e+07 5.33714e+06 1.31361e+07 135 1.31088e+07 1.067e+07 0.00396597 1.31864e+07 50.1474 0.00990068 0.995751 0 50.1666 GTEX-12BJ1-0226-SM-5LUA2 1 B1 2 pieces, patchy mild-moderate intersitital fibrosis, micro infarct noted (encircled) 6 Heart Heart - Left Ventricle 0006566 103 1022 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990917 245982 0.983668 0.992763 0.85106 19585 1 76 0.00416648 147 0 6.52043e+07 0.0160881 1.31817e+06 6.56796e+07 6.03331e+06 19593 3.2454e+07 0 0.132608 0.992763 0.844901 6.52043e+07 0.00332181 1.41846e+07 1.99498e+07 1.42279e+07 166 1.42029e+07 1.01386e+07 0.00374493 1.43362e+07 50.2334 0.0200697 0.994608 0 50.0762 GTEX-12BJ1-0326-SM-5FQUB 2 B1 2 pieces, fat necrosis, fibrosis 7.6 Heart Heart - Atrial Appendage 0006631 105 1020 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987913 229809 0.982605 0.99105 0.829357 21397 1 76 0.00199798 269 0 9.35198e+07 0.0172461 1.64052e+06 9.43644e+07 1.30793e+07 21408 4.65413e+07 0 0.153248 0.99105 0.821934 9.35198e+07 0.00330706 1.98026e+07 3.49149e+07 1.95039e+07 300 1.93191e+07 1.26166e+07 0.00265044 2.02421e+07 51.1664 0.0173849 0.994187 0 49.62 GTEX-12BJ1-0426-SM-5FQSO 1 B1 2 pieces, single lymphoid aggregate (encircled), features of multinodular goiter 6.9 Thyroid Thyroid 0002046 107 1018 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990366 188946 0.972526 0.99324 0.784706 23797 1 76 0.00209614 158 0 7.28952e+07 0.0271547 288412 7.33913e+07 9.20998e+06 23828 3.62638e+07 0 0.187821 0.99324 0.779402 7.28952e+07 0.00342732 1.60779e+07 7.14405e+06 1.6117e+07 166 1.61342e+07 1.26738e+07 0.0027598 1.62552e+07 50.1868 0.00392978 0.996115 0 50.0606 GTEX-12BJ1-0526-SM-5FQUD 1 B1 2 pieces, unusually well preserved, all cortex, minimal fat 7.9 Adrenal Gland Adrenal Gland 0002369 112 1013 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989132 275336 0.97752 0.992888 0.840965 22451 1 76 0.0021001 201 0 7.54859e+07 0.0220401 1.0943e+06 7.60266e+07 1.03064e+07 22470 3.75183e+07 0 0.136555 0.992888 0.834984 7.54859e+07 0.00349434 1.67035e+07 9.69633e+06 1.66786e+07 215 1.67126e+07 1.26877e+07 0.00279458 1.69307e+07 50.3241 0.0143936 0.996644 0 49.9628 GTEX-12BJ1-0726-SM-5EGGF 1 B1 2 pieces, moderate congestion 6.3 Spleen Spleen 0002106 114 1011 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979942 268470 0.962021 0.98566 0.789859 23789 1 76 0.00266071 135 0 6.864e+07 0.0372313 428269 6.96386e+07 1.15443e+07 23814 3.40195e+07 0 0.172162 0.98566 0.778533 6.864e+07 0.00608417 1.49374e+07 1.08843e+07 1.50796e+07 161 1.5168e+07 1.01361e+07 0.00436251 1.52176e+07 50.0815 0.00614988 0.991379 0 50.2368 GTEX-12BJ1-0826-SM-5EQ5P 1 B1 2 pieces, fat appears underfixed (not relevant to -26 aliquots) 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 117 1008 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991501 222596 0.97815 0.993664 0.835312 21413 1 76 0.00184733 150 0 6.27825e+07 0.0215992 587618 6.31829e+07 7.40784e+06 21425 3.12542e+07 0 0.142838 0.993664 0.830019 6.27825e+07 0.00286662 1.38455e+07 6.74383e+06 1.38995e+07 166 1.38416e+07 9.92336e+06 0.00235587 1.40302e+07 50.3383 0.00930028 0.995827 0 50.0973 GTEX-12BJ1-0926-SM-5EQ62 1 B1 6 pieces, focal adherent dermal fat up to ~0.5mm; squamous epithelium is ~40-50 microns 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 120 1005 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990196 222200 0.973126 0.992845 0.810371 22752 1 76 0.0018839 142 0 5.98594e+07 0.0266975 680389 6.02907e+07 7.12720e+06 22770 2.97766e+07 0 0.162755 0.992845 0.804573 5.98594e+07 0.00302106 1.32505e+07 6.92073e+06 1.32923e+07 154 1.32485e+07 9.17539e+06 0.00245096 1.34439e+07 50.3661 0.0112851 0.995494 0 50.0788 GTEX-12BJ1-1026-SM-5EGJA 1 B1 2 pieces, mild peribronchial inflammation (chronic), delineated 8.8 Lung Lung 0008952 126 999 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990134 401786 0.969212 0.992846 0.796511 24251 1 76 0.00192567 274 0 9.22192e+07 0.0304618 364246 9.28837e+07 8.35701e+06 24287 4.58781e+07 0 0.172702 0.992846 0.790813 9.22192e+07 0.00286207 2.02533e+07 1.08102e+07 2.04874e+07 264 2.05312e+07 1.6175e+07 0.00239259 2.04466e+07 49.8968 0.00392153 0.995558 0 50.2873 GTEX-12BJ1-1126-SM-5EGGG 1 B1 2 pieces, well preserved, Islets well- visualized; rep ones delineated 6.3 Pancreas Pancreas 0001150 128 997 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984892 234691 0.978756 0.989504 0.85871 20802 1 76 0.00262201 97 0 6.92537e+07 0.0209398 171595 6.99883e+07 1.0343e+07 20814 3.4387e+07 0 0.120046 0.989504 0.849697 6.92537e+07 0.0057002 1.5891e+07 2.25652e+07 1.60854e+07 107 1.61211e+07 2.10711e+07 0.00415393 1.61771e+07 50.0867 0.00245177 0.994116 0 50.3039 GTEX-12BJ1-1226-SM-5LUAE 1 B1 2 pieces, glandular epithelial hyperplasia, well -preserved. 8.3 Prostate Prostate 0002367 129 996 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99135 316650 0.970131 0.993258 0.793762 24323 1 76 0.00432667 142 0 7.41709e+07 0.0294921 253841 7.46743e+07 6.40646e+06 24354 3.69001e+07 0 0.176369 0.993258 0.788411 7.41709e+07 0.00346668 1.61404e+07 6.66126e+06 1.62225e+07 153 1.62288e+07 1.36201e+07 0.0038975 1.62716e+07 50.0658 0.00339931 0.995167 0 50.1267 GTEX-12BJ1-1326-SM-5BC5P 1 B1 2 pieces, well preserved. Spermatogenesis is present but appears reduced 6.3 Testis Testis 0000473 141 984 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987413 302919 0.945757 0.991457 0.762216 30068 1 76 0.00263688 135 0 6.69268e+07 0.0539604 805825 6.75034e+07 1.5543e+07 30106 3.32518e+07 0 0.183541 0.991457 0.755704 6.69268e+07 0.00453667 1.44488e+07 8.94397e+06 1.44638e+07 145 1.45478e+07 1.05657e+07 0.0035829 1.46131e+07 50.112 0.0119375 0.995501 0 50.0261 GTEX-12BJ1-1426-SM-5BC5Q 1 B1 6 pieces, all muscularis, good specimens 7.2 Esophagus Esophagus - Muscularis 0004648 141 984 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988886 311772 0.979699 0.992761 0.86065 21403 1 76 0.00247784 173 0 7.52876e+07 0.0200247 513052 7.58366e+07 2.18224e+07 21415 3.74152e+07 0 0.119049 0.992761 0.854419 7.52876e+07 0.00429448 1.63772e+07 8.20477e+06 1.65252e+07 194 1.65628e+07 1.3927e+07 0.00338261 1.66126e+07 50.075 0.00676523 0.996635 0 50.225 GTEX-12BJ1-1526-SM-5LUAQ 1 B1 6 pieces, all muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 143 982 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99212 224901 0.97684 0.993977 0.846991 21159 1 76 0.00427045 133 0 5.86885e+07 0.0228696 470806 5.90441e+07 5.02992e+06 21170 2.92014e+07 0 0.129849 0.993977 0.841889 5.86885e+07 0.00348537 1.2677e+07 5.48458e+06 1.27749e+07 140 1.27315e+07 1.04087e+07 0.00387864 1.28271e+07 50.1869 0.00797381 0.995835 0 50.1923 GTEX-12BJ1-1626-SM-5HL8Y 1 B1 6 pieces, squamous mucosa is ~0.5mm thick, ~20% total; a few submucosal mucus glands noted, delineated 9.1 Esophagus Esophagus - Mucosa 0006920 144 981 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989409 311803 0.975015 0.992305 0.823615 22159 1 76 0.00211813 170 0 7.19694e+07 0.024655 360242 7.25274e+07 6.19482e+06 22174 3.58005e+07 0 0.1514 0.992305 0.817277 7.19694e+07 0.00322269 1.60714e+07 9.91669e+06 1.61883e+07 170 1.61988e+07 1.39226e+07 0.0026688 1.62591e+07 50.0929 0.00496698 0.995202 0 50.1813 GTEX-12BJ1-1726-SM-5HL9B 1 B1 6 pieces, well preserved mucoa; patchy acute/active gastritis with leukocytes in deep mucosa and submucosa, rep foci delineated. Mucosa up to ~0.5-0.7mm thick, ~20% total 7.3 Stomach Stomach 0000945 150 975 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.985432 251516 0.978896 0.988927 0.847668 22735 1 76 0.00205153 291 0 8.21964e+07 0.0206695 479995 8.31168e+07 7.55938e+06 22753 4.08588e+07 0 0.131228 0.988927 0.838282 8.21964e+07 0.00325638 1.85886e+07 6.20700e+07 1.90087e+07 230 1.9062e+07 1.98898e+07 0.00265183 1.88134e+07 49.6717 0.00577495 0.992421 0 50.5587 GTEX-12BJ1-1826-SM-5HL9N 0 B1 2 pieces, fibroadipose tissue, no ductal elements noted 7.6 Breast Breast - Mammary Tissue 0008367 152 973 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988611 264521 0.978059 0.991974 0.830502 22891 1 76 0.00201328 209 0 8.12181e+07 0.0216218 411715 8.18752e+07 8.08148e+06 22915 4.03849e+07 0 0.147556 0.991974 0.823837 8.12181e+07 0.00308531 1.78928e+07 8.31495e+06 1.8023e+07 238 1.80325e+07 1.46556e+07 0.00254748 1.8139e+07 50.1472 0.00502857 0.995337 0 50.1813 GTEX-12BJ1-1926-SM-5HL9Z 1 B1 6 pieces, well preserved, good lymphoid aggregates, ~40% total tisssue; rep foci delineated 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 162 963 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989428 277350 0.965217 0.99176 0.764592 25352 1 76 0.00219128 276 0 9.23968e+07 0.0344719 538180 9.31645e+07 7.82451e+06 25396 4.5984e+07 0 0.200626 0.99176 0.758292 9.23968e+07 0.00307892 2.01765e+07 1.2541e+07 2.04759e+07 268 2.03897e+07 1.26021e+07 0.00263406 2.0452e+07 50.0762 0.00577667 0.994093 0 50.3683 GTEX-12BJ1-2026-SM-5FQUH 1 B1 6 pieces, all muscularis, trace 'contaminant' mucosa; good specimens 7.5 Colon Colon - Sigmoid 0001159 166 959 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991378 222911 0.976719 0.993803 0.847613 21716 1 76 0.00197781 213 0 7.53497e+07 0.0229529 456311 7.58196e+07 9.09172e+06 21732 3.75111e+07 0 0.129106 0.993803 0.84236 7.53497e+07 0.00298427 1.63528e+07 7.48535e+06 1.62911e+07 217 1.63042e+07 1.41688e+07 0.00247981 1.65116e+07 50.3159 0.00601838 0.996227 0 49.9055 GTEX-12BJ1-2126-SM-5BC5O 1 B1 6 pieces, well preserved mucosa up to ~40-50% thickness 5.9 Colon Colon - Transverse 0001157 171 954 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988872 246135 0.974731 0.992357 0.827173 22832 1 76 0.00269046 206 0 7.65216e+07 0.0246989 1.27381e+06 7.71109e+07 1.98349e+07 22858 3.80318e+07 0 0.147558 0.992357 0.820851 7.65216e+07 0.0047292 1.70332e+07 1.25993e+07 1.69951e+07 223 1.69532e+07 1.06822e+07 0.00370625 1.73121e+07 50.5237 0.0165192 0.995842 0 49.944 GTEX-12BJ1-2226-SM-5BC6G 1 B1 2 pieces,j ~40% glandular tissue (rep foci delineated), rest is squamous mucosa/muscle/stroma 9.4 Salivary Gland Minor Salivary Gland 0006330 182 943 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988843 323606 0.975937 0.99243 0.815103 23008 1 76 0.00268334 174 0 8.18523e+07 0.0236229 259931 8.24766e+07 1.95227e+07 23028 4.06896e+07 0 0.160834 0.99243 0.808933 8.18523e+07 0.00472955 1.81761e+07 1.34135e+07 1.82907e+07 189 1.83827e+07 1.60353e+07 0.00370275 1.8363e+07 49.9732 0.00315157 0.996017 0 50.1571 GTEX-12BJ1-2526-SM-5FQUE 0 B1 2 pieces, minimal interstitial fat 7.9 Muscle Muscle - Skeletal 0011907 306 819 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989924 236552 0.981792 0.993157 0.870984 19517 1 76 0.00191716 166 0 7.0982e+07 0.0179569 615871 7.14711e+07 1.01088e+07 19524 3.5314e+07 0 0.110808 0.993157 0.865025 7.0982e+07 0.00307068 1.55599e+07 1.01536e+07 1.52967e+07 187 1.53425e+07 1.50782e+07 0.00249204 1.57241e+07 50.6142 0.00861706 0.996391 0 49.5735 GTEX-12BJ1-2626-SM-5FQUF 0 B1 4 pieces, clean specimens, no adherent fat 6.5 Nerve Nerve - Tibial 0001323 309 816 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989029 212731 0.971599 0.992288 0.785669 23131 1 76 0.0021615 153 0 6.86853e+07 0.0281024 297409 6.92191e+07 9.25238e+06 23161 3.41468e+07 0 0.18593 0.992288 0.77961 6.86853e+07 0.00361354 1.50867e+07 6.30565e+06 1.51786e+07 160 1.52005e+07 1.15277e+07 0.00288514 1.52758e+07 50.1234 0.00429664 0.995547 0 50.152 GTEX-12BJ1-2726-SM-5HL9M 0 B1 2 pieces, rim of adherent fibrous tissue, up to ~1mm thick, delineated, generally good specimens 6.7 Blood Vessel Artery - Tibial 0007610 311 814 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990171 248899 0.973233 0.992722 0.824043 22110 1 76 0.00200183 169 0 8.05426e+07 0.0263686 390855 8.11331e+07 7.53565e+06 22133 4.006e+07 0 0.149189 0.992722 0.818046 8.05426e+07 0.00292326 1.73445e+07 6.58233e+06 1.7425e+07 199 1.74176e+07 1.51953e+07 0.00246136 1.75457e+07 50.1831 0.00481745 0.995272 0 50.1158 GTEX-12BJ1-5001-SM-AN3X8 B1 Heart Heart - Left Ventricle 0006566 104 ChIP-Seq GTEX-12BJ1-5022-SM-AN3XA B1 Muscle Muscle - Skeletal 0011907 307 ChIP-Seq GTEX-12C56-0002-SM-5S2PC B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -56 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992633 805183 0.958753 0.993564 0.831466 19920 1 76 0.00201907 146 0 6.21508e+07 0.0400764 380740 6.25534e+07 3.37901e+06 19931 3.09478e+07 0 0.127287 0.993564 0.826115 6.21508e+07 0.00256092 1.36301e+07 1.32785e+07 1.37894e+07 144 1.37735e+07 1.34588e+07 0.00228974 1.37089e+07 49.8824 0.00608664 0.994496 0 50.2904 GTEX-12C56-0003-SM-5DU56 B1 Blood Whole Blood 0013756 -56 BP-41058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12C56-0003-SM-7DRPT B1 Blood Whole Blood 0013756 -56 BP-41058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12C56-0006-SM-5N9E9 B1 8.7 Blood Whole Blood 0013756 -56 BP-41053 RNA isolation_PAXgene Blood RNA (Manual) 07/19/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.966969 1.07642e+06 0.96652 0.968525 0.805586 19450 1 76 0.00405116 196 0 1.2342e+08 0.032823 257354 1.27431e+08 6.18599e+06 19466 6.13632e+07 0 0.160934 0.968525 0.78023 1.2342e+08 0.00414885 2.81842e+07 1.62412e+08 2.85716e+07 248 2.85896e+07 3.18522e+07 0.00409992 2.83728e+07 49.8097 0.00201955 0.970081 0 50.3413 GTEX-12C56-0008-SM-5TDC1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.991595 448837 0.979821 0.994201 0.881418 21075 1 76 0.00183712 282 0 1.08895e+08 0.0198853 238542 1.0953e+08 1.27631e+07 21085 5.41994e+07 0 0.098403 0.994201 0.876307 1.08895e+08 0.00332875 2.44638e+07 1.46901e+07 2.45151e+07 293 2.45626e+07 2.78949e+07 0.00258098 2.46989e+07 50.1384 0.00217787 0.996807 0 50.0524 GTEX-12C56-0226-SM-5N9FB 0 B1 6 pieces, attached adventitia, no lesions 5.7 Blood Vessel Artery - Aorta 0001496 178 1253 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989809 333926 0.972018 0.990962 0.815645 23752 1 76 0.00374317 278 0 1.09718e+08 0.0276855 615969 1.10719e+08 5.39100e+06 23785 5.45389e+07 0 0.156373 0.990962 0.808274 1.09718e+08 0.00376187 2.37867e+07 9.50657e+06 2.39288e+07 323 2.38116e+07 1.90593e+07 0.00375251 2.40235e+07 50.2215 0.00556337 0.992116 0 50.1489 GTEX-12C56-0426-SM-5FQU1 0 B1 6 pieces, predominantly well trimmed, but with two small strips of squamous mucosa 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 191 1240 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990587 310796 0.975896 0.993626 0.833642 22366 1 76 0.00200827 278 0 8.56562e+07 0.0238367 739517 8.62056e+07 1.10009e+07 22385 4.26079e+07 0 0.142254 0.993626 0.828328 8.56562e+07 0.00336896 1.85308e+07 9.40692e+06 1.86041e+07 265 1.86071e+07 1.49837e+07 0.00268654 1.87707e+07 50.2189 0.00857852 0.996666 0 50.0988 GTEX-12C56-0526-SM-5FQST 2 B1 6 pieces, mucosa, submucosa, and muscularis, mild acute gastritis, predominantly autolysis 1, focally 2 7.3 Stomach Stomach 0000945 193 1238 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.991303 199466 0.977459 0.993863 0.847355 22255 1 76 0.00199428 167 0 6.88477e+07 0.0222815 494946 6.92728e+07 9.07176e+06 22266 3.42688e+07 0 0.130105 0.993863 0.842154 6.88477e+07 0.00322326 1.50954e+07 6.9351e+06 1.51306e+07 178 1.51174e+07 1.25054e+07 0.00260719 1.52765e+07 50.2618 0.00714488 0.996423 0 50.0582 GTEX-12C56-0626-SM-5EGGC 2 B1 6 pieces, mucosa and muscularis 7.2 Colon Colon - Transverse 0001157 198 1233 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.974299 194325 0.971637 0.979084 0.793367 23486 1 76 0.00254455 139 0 6.34167e+07 0.0269788 782625 6.47714e+07 9.56045e+06 23516 3.14371e+07 0 0.17827 0.979084 0.776773 6.34167e+07 0.00553216 1.41531e+07 1.17042e+07 1.38958e+07 157 1.39406e+07 8.62924e+06 0.00403105 1.43855e+07 50.7854 0.0120829 0.98387 0 49.5413 GTEX-12C56-0826-SM-5EGJ5 1 B1 2 pieces, 10% is fibrous/vascular 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 201 1230 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990945 275994 0.979419 0.993206 0.831208 22372 1 76 0.00161014 275 0 8.34581e+07 0.0203534 1.04544e+06 8.4029e+07 6.87043e+06 22386 4.15549e+07 0 0.148211 0.993206 0.82556 8.34581e+07 0.00254419 1.83929e+07 1.55863e+07 1.8463e+07 269 1.84114e+07 1.39062e+07 0.0020761 1.86175e+07 50.2782 0.0124414 0.995466 0 50.0951 GTEX-12C56-1126-SM-5FQTO 1 B1 6 pieces, well trimmed 7.4 Esophagus Esophagus - Muscularis 0004648 214 1217 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990412 227450 0.97475 0.993118 0.830382 22393 1 76 0.00201951 214 0 8.17699e+07 0.0250087 675446 8.23365e+07 1.08317e+07 22411 4.06926e+07 0 0.144369 0.993118 0.824667 8.17699e+07 0.00333873 1.77246e+07 8.50503e+06 1.7792e+07 246 1.77585e+07 1.4038e+07 0.00267732 1.79648e+07 50.2887 0.00820348 0.995825 0 50.0948 GTEX-12C56-1226-SM-5FQSU 1 B1 4 pieces 9.8 Esophagus Esophagus - Mucosa 0006920 215 1216 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.986743 276821 0.976234 0.990371 0.83023 22512 1 76 0.0021654 215 0 8.4053e+07 0.0233332 416276 8.48702e+07 1.32543e+07 22528 4.17845e+07 0 0.146004 0.990371 0.822236 8.4053e+07 0.00341989 1.89636e+07 1.32181e+07 1.89529e+07 237 1.90245e+07 1.69691e+07 0.00279035 1.91821e+07 50.2062 0.00490486 0.994 0 49.9859 GTEX-12C56-1326-SM-5FQSV 0 B1 2 pieces, ~30% of each is fibrous/vascular/nerve 6.9 Prostate Prostate 0002367 223 1208 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98698 331049 0.963135 0.990546 0.744012 25508 1 76 0.00228663 161 0 7.96001e+07 0.0366061 485876 8.03598e+07 1.03735e+07 25547 3.95526e+07 0 0.219123 0.990546 0.736978 7.96001e+07 0.00369633 1.73899e+07 9.31477e+06 1.75062e+07 190 1.75362e+07 1.06248e+07 0.00298894 1.76197e+07 50.1187 0.00604625 0.994111 0 50.1667 GTEX-12C56-1426-SM-5FQSW 2 B1 2 pieces, active spermatogenesis 7 Testis Testis 0000473 229 1202 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989298 320458 0.929067 0.991614 0.736739 32853 1 76 0.00218886 215 0 8.31648e+07 0.070627 1.06781e+06 8.38681e+07 1.02506e+07 32918 4.13991e+07 0 0.192328 0.991614 0.730561 8.31648e+07 0.00322135 1.73738e+07 1.2812e+07 1.7273e+07 203 1.73293e+07 1.32194e+07 0.00270389 1.74876e+07 50.2273 0.012732 0.993931 0 49.8546 GTEX-12C56-1526-SM-5FQUQ 1 B1 6 pieces, some with up to 10% attached and intradermal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 231 1200 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.99 238125 0.970772 0.992861 0.797488 25271 1 76 0.00210068 187 0 7.18678e+07 0.0289826 541412 7.23845e+07 8.90627e+06 25294 3.57487e+07 0 0.173284 0.992861 0.791795 7.18678e+07 0.00341635 1.56991e+07 8.26729e+06 1.57648e+07 171 1.57663e+07 1.25539e+07 0.00275662 1.58922e+07 50.1988 0.00747966 0.995723 0 50.1044 GTEX-12C56-1626-SM-5FQUO 1 B1 2 pieces, one includes ~20% stroma and sweat glands, second has region of hemorrhage 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 239 1192 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.990357 575932 0.98004 0.993148 0.848208 25389 1 76 0.00203579 390 0 1.76645e+08 0.019659 826602 1.77864e+08 2.59849e+07 25427 8.79021e+07 0 0.131832 0.993148 0.842396 1.76645e+08 0.00316404 3.89452e+07 2.11596e+07 3.90899e+07 368 3.91558e+07 3.58982e+07 0.00259833 3.93465e+07 50.1215 0.00464739 0.995939 0 50.0927 GTEX-12C56-1726-SM-5EQ61 1 B1 6 pieces, up to 20% attached fat, squamous epithelium is 30-35 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 241 1190 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989159 319813 0.967061 0.992288 0.773228 24041 1 76 0.00195475 188 0 6.98213e+07 0.0327288 481478 7.0364e+07 8.75841e+06 24068 3.47144e+07 0 0.193833 0.992288 0.767265 6.98213e+07 0.00301087 1.51366e+07 8.72560e+06 1.52847e+07 168 1.52903e+07 1.10235e+07 0.00248115 1.53387e+07 50.0791 0.00684268 0.995417 0 50.2434 GTEX-12C56-1826-SM-5EQ6D 0 B1 2 pieces, no extraneous adipose tissue 6.8 Nerve Nerve - Tibial 0001323 249 1182 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991405 252237 0.966558 0.993439 0.748289 24270 1 76 0.0019432 172 0 7.44979e+07 0.0331679 283475 7.49899e+07 8.24468e+06 24302 3.70817e+07 0 0.218269 0.993439 0.74338 7.44979e+07 0.00276843 1.62974e+07 6.65801e+06 1.64478e+07 174 1.64299e+07 1.15719e+07 0.00235497 1.64575e+07 50.042 0.00378017 0.995472 0 50.2295 GTEX-12C56-1926-SM-5FQUG 1 B1 2 pieces, includes portion of tendon 8.1 Muscle Muscle - Skeletal 0011907 250 1181 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988853 261614 0.984629 0.992628 0.874471 19787 1 76 0.00184009 273 0 8.27583e+07 0.0151372 722139 8.33729e+07 1.32357e+07 19791 4.11511e+07 0 0.110158 0.992628 0.868025 8.27583e+07 0.00309755 1.81069e+07 1.42708e+07 1.80379e+07 256 1.80298e+07 1.64403e+07 0.00246642 1.83952e+07 50.5016 0.00866156 0.996403 0 49.9046 GTEX-12C56-2026-SM-5FQSI 1 B1 2 pieces, no extraneous adipose tissue 8.3 Blood Vessel Artery - Tibial 0007610 253 1178 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989972 218697 0.976909 0.993127 0.874417 20608 1 76 0.00217639 211 0 8.04531e+07 0.0227142 388419 8.10099e+07 1.21745e+07 20616 4.00182e+07 0 0.102492 0.993127 0.868407 8.04531e+07 0.00343623 1.70432e+07 7.01572e+06 1.71685e+07 228 1.71736e+07 1.71176e+07 0.00280431 1.72753e+07 50.1476 0.00479471 0.996282 0 50.1831 GTEX-12KS4-0003-SM-5ANGF C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12KS4-0003-SM-5DWRE C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12KS4-0003-SM-7DRPS C1 Blood Whole Blood 0013756 342 BP-41344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12KS4-0005-SM-5SI94 C1 9 Blood Whole Blood 0013756 342 BP-41341 RNA isolation_PAXgene Blood RNA (Manual) 07/25/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.984981 707481 0.965624 0.987675 0.769552 20393 1 76 0.00227617 123 0 7.70353e+07 0.0337604 170480 7.79966e+07 7.26934e+06 20407 3.83117e+07 0 0.196072 0.987675 0.760068 7.70353e+07 0.00370976 1.73877e+07 6.29621e+07 1.74132e+07 140 1.74478e+07 1.72249e+07 0.00299101 1.75805e+07 50.1894 0.00218574 0.99037 0 50.0366 GTEX-12KS4-0008-SM-664MC C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 465 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993098 338142 0.980064 0.993708 0.880842 21121 1 76 0.00196743 289 0 1.17805e+08 0.0196165 538614 1.18551e+08 7.53107e+06 21139 5.86948e+07 0 0.0992219 0.993708 0.8753 1.17805e+08 0.00267929 2.64074e+07 1.37695e+07 2.65343e+07 329 2.64549e+07 2.95144e+07 0.00232314 2.65685e+07 50.1072 0.00454331 0.994317 0 50.1198 GTEX-12KS4-0126-SM-5Q5A5 1 C1 1 piece, gynecomastoid stromal hyperplasia; rep. duct elements delineated 6.2 Breast Breast - Mammary Tissue 0008367 447 1004 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990584 213401 0.975103 0.992967 0.806693 22346 1 76 0.0018214 166 0 7.37602e+07 0.0246168 959560 7.42826e+07 5.45748e+06 22367 3.67005e+07 0 0.16841 0.992967 0.80102 7.37602e+07 0.00287252 1.61362e+07 9.13866e+06 1.62643e+07 186 1.62354e+07 1.24094e+07 0.0023457 1.6334e+07 50.1514 0.0129177 0.995351 0 50.1976 GTEX-12KS4-0326-SM-5EQ41 0 C1 6 pieces, minimal dermal fat;squamous epithelium is ~50-6-microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 464 988 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991183 397180 0.972409 0.993769 0.792308 23381 1 76 0.00196667 174 0 7.01207e+07 0.0272987 309908 7.05604e+07 8.59908e+06 23407 3.48742e+07 0 0.180101 0.993769 0.787371 7.01207e+07 0.00319888 1.52094e+07 8.86453e+06 1.54118e+07 163 1.54218e+07 1.24448e+07 0.00258117 1.5373e+07 49.9207 0.0043921 0.996355 0 50.3304 GTEX-12KS4-0426-SM-5EQMC 0 C1 2 pieces, ~15% fibrovascular/fascial tissue, rep delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 466 987 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.99051 180597 0.973904 0.992599 0.775831 23288 1 76 0.00207589 163 0 7.81625e+07 0.0257567 523759 7.87453e+07 1.0168e+07 23313 3.89102e+07 0 0.198073 0.992599 0.770089 7.81625e+07 0.00286769 1.71954e+07 8.74554e+06 1.71587e+07 202 1.71554e+07 1.2894e+07 0.00247096 1.73568e+07 50.2918 0.00665131 0.994689 0 49.9465 GTEX-12KS4-0626-SM-5PNY4 1 C1 6 pieces, atherosis up to ~0.4mm, rep delineated 5.7 Blood Vessel Artery - Aorta 0001496 483 971 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990614 176053 0.974194 0.991238 0.777358 22923 1 76 0.00326138 170 0 8.59102e+07 0.0254507 187068 8.66696e+07 2.60339e+06 22949 4.27445e+07 0 0.196835 0.991238 0.770547 8.59102e+07 0.00379832 1.86569e+07 7.22655e+06 1.87412e+07 192 1.86631e+07 1.45951e+07 0.00352968 1.87922e+07 50.1723 0.0021584 0.991862 0 50.1126 GTEX-12KS4-0726-SM-5FQSX 2 C1 2 pieces, moderate congestion 6.2 Lung Lung 0008952 485 969 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987686 260994 0.976046 0.991457 0.786282 23570 1 76 0.0023215 139 0 7.2701e+07 0.0236906 163916 7.33274e+07 1.05008e+07 23591 3.61183e+07 0 0.189763 0.991457 0.779566 7.2701e+07 0.00375906 1.60234e+07 7.68121e+06 1.61701e+07 162 1.62101e+07 1.27026e+07 0.00303755 1.62484e+07 50.059 0.0022354 0.995228 0 50.2279 GTEX-12KS4-0826-SM-5BC5R 0 C1 2 pieces, fewfoci of interstiital fat, rep. delineated 6.5 Muscle Muscle - Skeletal 0011907 491 964 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987029 298487 0.984548 0.991616 0.859435 19741 1 76 0.0024759 154 0 7.36173e+07 0.0152275 916202 7.42397e+07 2.18735e+07 19751 3.65596e+07 0 0.125113 0.991616 0.85223 7.36173e+07 0.00465518 1.60499e+07 1.07954e+07 1.59016e+07 174 1.59801e+07 1.43001e+07 0.0035605 1.6273e+07 50.4541 0.0123411 0.996203 0 49.7679 GTEX-12KS4-0926-SM-5BC5S 1 C1 6 pieces, squamous mucosa is ~0.2mm, ~15% thickness. Focally early superficial sloughing is beginning (ie, early score'2;) 6.4 Esophagus Esophagus - Mucosa 0006920 492 963 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985994 265544 0.973513 0.990872 0.756335 23168 1 76 0.0026931 132 0 6.74932e+07 0.0262133 237022 6.8115e+07 1.74701e+07 23195 3.34903e+07 0 0.217178 0.990872 0.749431 6.74932e+07 0.00564301 1.50465e+07 8.63374e+06 1.52098e+07 146 1.53119e+07 1.09768e+07 0.00416079 1.52655e+07 49.9241 0.00347973 0.995749 0 50.2698 GTEX-12KS4-1026-SM-5FQTD 1 C1 6 pieces, all muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 494 962 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989336 196153 0.972481 0.992299 0.773942 24325 1 76 0.00227028 134 0 6.54211e+07 0.0272991 475907 6.59289e+07 9.06852e+06 24355 3.25322e+07 0 0.198539 0.992299 0.767982 6.54211e+07 0.00372955 1.42181e+07 6.05683e+06 1.4307e+07 146 1.43304e+07 1.05756e+07 0.00299774 1.43769e+07 50.081 0.00721849 0.995262 0 50.1559 GTEX-12KS4-1126-SM-5FQUI 0 C1 2 pieces, good specimens, one section with ~0.5mm rim of fat along one edge, delineated 5.8 Nerve Nerve - Tibial 0001323 496 960 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.987766 200325 0.96736 0.99149 0.746555 23937 1 76 0.00228778 144 0 6.81716e+07 0.0323611 311198 6.87567e+07 1.03176e+07 23966 3.38726e+07 0 0.220805 0.99149 0.740202 6.81716e+07 0.00378924 1.49236e+07 7.10876e+06 1.50293e+07 151 1.50652e+07 1.03512e+07 0.00303569 1.51278e+07 50.1036 0.00452608 0.995215 0 50.1764 GTEX-12KS4-1326-SM-5LUB3 1 C1 2 pieces moderate passive congestion 6 Liver Liver 0001114 500 957 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990923 326664 0.972361 0.993073 0.831911 21272 1 76 0.00449944 139 0 6.54767e+07 0.0269981 1.08188e+06 6.59335e+07 5.73048e+06 21287 3.25362e+07 0 0.14045 0.993073 0.826148 6.54767e+07 0.00378483 1.41486e+07 1.13278e+07 1.41821e+07 159 1.4161e+07 1.03312e+07 0.00414291 1.43101e+07 50.2617 0.0164086 0.995223 0 50.059 GTEX-12KS4-1526-SM-5EQ6E 1 C1 2 pieces, minimal fibrous or vascular tissue, go specimens 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 506 953 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990716 313472 0.97926 0.993031 0.760218 22519 1 76 0.00206125 163 0 7.34723e+07 0.0204354 730885 7.39879e+07 8.49793e+06 22548 3.65522e+07 0 0.219043 0.993031 0.75492 7.34723e+07 0.0031034 1.6357e+07 9.41854e+06 1.64614e+07 173 1.6485e+07 1.14608e+07 0.00258111 1.65e+07 50.0226 0.00987844 0.995346 0 50.1589 GTEX-12KS4-2126-SM-5FQUT 0 C1 6 pieces, minimal dermal fat, squamous epithelium is 30-50 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 536 926 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989147 233732 0.974972 0.992341 0.776485 23641 1 76 0.00226564 151 0 6.61259e+07 0.0247648 424386 6.66363e+07 9.88448e+06 23667 3.28811e+07 0 0.198487 0.992341 0.770538 6.61259e+07 0.00360275 1.4538e+07 8.36815e+06 1.45883e+07 147 1.46296e+07 1.14509e+07 0.00293204 1.4697e+07 50.115 0.00636869 0.995535 0 50.0864 GTEX-12KS4-2326-SM-5EGJB 1 C1 6 pieces, all muscularis 6.8 Colon Colon - Sigmoid 0001159 543 920 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989565 328663 0.968621 0.992532 0.756544 24354 1 76 0.00193929 277 0 9.39327e+07 0.0311185 515677 9.46394e+07 8.19294e+06 24391 4.66943e+07 0 0.212077 0.992532 0.750894 9.39327e+07 0.00303961 2.01042e+07 8.93e+06 2.03049e+07 258 2.03123e+07 1.47736e+07 0.00248781 2.0359e+07 50.0573 0.00544886 0.995499 0 50.2484 GTEX-12KS4-2426-SM-5LU8P 2 C1 6 pieces, mucosa is ~0.3mm thick, moderately-severely autolyzed 6.1 Colon Colon - Transverse 0001157 546 917 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988665 330334 0.969359 0.990783 0.748892 24510 1 76 0.00495414 135 0 6.88211e+07 0.0292442 637297 6.94613e+07 6.03295e+06 24544 3.41449e+07 0 0.220467 0.990783 0.741989 6.88211e+07 0.00433897 1.5081e+07 7.75665e+06 1.51353e+07 151 1.5139e+07 9.42486e+06 0.00464721 1.52242e+07 50.1403 0.00917485 0.9929 0 50.0899 GTEX-12WS9-0001-SM-5DU63 C1 Blood Whole Blood 0013756 450 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WS9-0001-SM-7DRQ3 C1 Blood Whole Blood 0013756 450 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12WS9-0006-SM-5O99W C1 7.2 Blood Whole Blood 0013756 450 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.981177 648262 0.972139 0.984895 0.822311 19001 1 76 0.00236918 144 0 9.30072e+07 0.0273481 363577 9.44337e+07 1.28292e+07 19009 4.61883e+07 0 0.149828 0.984895 0.80989 9.30072e+07 0.00434736 2.11069e+07 8.7489e+07 2.12e+07 168 2.12176e+07 2.22021e+07 0.00335454 2.14576e+07 50.2811 0.00385008 0.988614 0 50.11 GTEX-12WS9-0008-SM-5TDC2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 497 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.991775 339632 0.979844 0.9943 0.878314 20711 1 76 0.0019391 213 0 9.09587e+07 0.0198975 247700 9.14801e+07 1.06265e+07 20727 4.52797e+07 0 0.10153 0.9943 0.873308 9.09587e+07 0.00348649 2.04231e+07 1.26543e+07 2.046e+07 249 2.04945e+07 2.33867e+07 0.00271083 2.06159e+07 50.1477 0.00270769 0.996825 0 50.0452 GTEX-12WS9-0011-R10a-SM-57WBV C1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 451 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 EXCLUDE 0.988887 596477 0.956934 0.991985 0.82679 22318 1 76 0.00221574 196 0 6.95507e+07 0.0428518 4.73628e+06 7.01126e+07 8.98067e+06 22330 3.45692e+07 0 0.130144 0.991985 0.820163 6.95507e+07 0.00388089 1.51983e+07 1.40328e+07 1.53492e+07 210 1.51885e+07 7.12546e+06 0.00304571 1.55584e+07 50.6015 0.0675525 0.995083 0 50.2469 GTEX-12WS9-0011-R2a-SM-5CVNE C1, A1 8.7 Brain Brain - Substantia nigra 0002038 451 BP-43681 RNA isolation_PAXgene Tissue miRNA 09/17/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.986997 262468 0.97379 0.990424 0.836183 21545 1 76 0.00543533 201 0 7.75161e+07 0.0260821 9.56879e+06 7.82655e+07 1.39392e+07 21554 3.8516e+07 0 0.137606 0.990424 0.828176 7.75161e+07 0.00745532 1.69402e+07 3.10976e+07 1.70929e+07 247 1.66611e+07 5.50774e+06 0.00644183 1.75628e+07 51.3173 0.122261 0.993852 0 50.2243 GTEX-12WS9-0011-R3a-SM-5CVNF C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 451 BP-43681 RNA isolation_PAXgene Tissue miRNA 09/17/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.984557 412819 0.966125 0.989688 0.846628 22107 1 76 0.00526537 150 0 6.71239e+07 0.0336632 6.63873e+06 6.78232e+07 1.24636e+07 22115 3.32828e+07 0 0.119497 0.989688 0.837898 6.71239e+07 0.00811428 1.47329e+07 2.30299e+07 1.47324e+07 176 1.46707e+07 5.68462e+06 0.00668244 1.50764e+07 50.6818 0.0978828 0.99482 0 49.9992 GTEX-12WS9-0011-R4b-SM-5P9EU C1, A1 6.1 Brain Brain - Amygdala 0001876 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.987487 757201 0.967468 0.988171 0.815318 22576 1 76 0.00358263 371 0 1.3143e+08 0.0324176 2.09431e+07 1.33003e+08 4.48214e+06 22590 6.54298e+07 0 0.152151 0.988171 0.805673 1.3143e+08 0.00429668 2.78791e+07 8.45844e+07 2.90841e+07 406 2.82623e+07 7.45383e+06 0.00393941 2.87681e+07 50.4434 0.157463 0.988855 0 51.0577 GTEX-12WS9-0011-R5b-SM-5P9EV C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.989922 924909 0.960435 0.990313 0.811177 24721 1 76 0.00320477 374 0 1.35479e+08 0.0393014 8.85664e+06 1.36804e+08 4.31279e+06 24744 6.74703e+07 0 0.149259 0.990313 0.803319 1.35479e+08 0.00382339 2.8929e+07 6.17724e+07 2.95055e+07 367 2.91166e+07 1.43257e+07 0.00351396 2.93924e+07 50.2357 0.0647397 0.990704 0 50.4933 GTEX-12WS9-0011-R6a-SM-5P9EW C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 451 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.989874 895270 0.96035 0.990276 0.812726 25020 1 76 0.00329955 376 0 1.51985e+08 0.039431 1.32948e+07 1.53478e+08 5.13397e+06 25047 7.57112e+07 0 0.147624 0.990276 0.804823 1.51985e+08 0.00383452 3.23326e+07 6.50346e+07 3.33353e+07 372 3.28491e+07 1.40573e+07 0.00356692 3.28771e+07 50.0213 0.0866237 0.990678 0 50.7635 GTEX-12WS9-0126-SM-5EGL7 0 C1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 496 1193 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989225 246726 0.981282 0.99202 0.829865 21109 1 76 0.00201481 171 0 6.55002e+07 0.0184505 210232 6.60271e+07 5.96178e+06 21128 3.25789e+07 0 0.151417 0.99202 0.823243 6.55002e+07 0.00299938 1.43884e+07 7.9291e+06 1.45004e+07 156 1.45436e+07 1.2583e+07 0.00250571 1.45204e+07 49.9601 0.00318402 0.994815 0 50.1939 GTEX-12WS9-0226-SM-5EQ4X 0 C1 2 pieces, ~10% fibrovascular elements, rep. delineated 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 498 1192 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.989897 266663 0.976357 0.992879 0.797261 21150 1 76 0.00208235 132 0 6.32663e+07 0.0234125 348390 6.37201e+07 8.20466e+06 21169 3.14473e+07 0 0.179097 0.992879 0.791584 6.32663e+07 0.00313894 1.38024e+07 7.00715e+06 1.3884e+07 150 1.388e+07 1.04106e+07 0.00260906 1.3986e+07 50.19 0.00546751 0.995862 0 50.1474 GTEX-12WS9-0326-SM-59HJV 0 C1 6 pieces, minimal dermal fat (delineated); squamous epithelium is ~50-60microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 501 1189 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.982394 216501 0.980625 0.988796 0.783919 21431 1 76 0.00247692 129 0 5.79215e+07 0.0191981 481574 5.85777e+07 9.95970e+06 21446 2.86947e+07 0 0.196706 0.988796 0.775136 5.79215e+07 0.00881836 1.28591e+07 7.76884e+06 1.29844e+07 125 1.31031e+07 1.02246e+07 0.00562711 1.31016e+07 49.9972 0.00822111 0.995199 0 50.2424 GTEX-12WS9-0426-SM-59HJW 0 C1 2 pieces, trace adherent fat up to ~0.2mm focally, delineated 7.1 Nerve Nerve - Tibial 0001323 503 1188 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.983001 224728 0.970793 0.98901 0.745089 23418 1 76 0.00256432 146 0 7.26287e+07 0.0289861 253070 7.34357e+07 1.44715e+07 23445 3.60056e+07 0 0.225703 0.98901 0.736901 7.26287e+07 0.00873808 1.59159e+07 7.89159e+06 1.60451e+07 149 1.61766e+07 1.1134e+07 0.00563245 1.61935e+07 50.0261 0.00344614 0.99502 0 50.2021 GTEX-12WS9-0526-SM-5FQT5 0 C1 2 pieces, clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 505 1186 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.988885 186779 0.976442 0.991969 0.834309 20856 1 76 0.002205 139 0 6.81437e+07 0.0232857 325885 6.86954e+07 1.03217e+07 20874 3.38914e+07 0 0.142133 0.991969 0.827609 6.81437e+07 0.00349018 1.4883e+07 7.40911e+06 1.494e+07 162 1.49663e+07 1.30132e+07 0.00284559 1.50574e+07 50.1518 0.00474391 0.995054 0 50.0957 GTEX-12WS9-0626-SM-5FQT2 0 C1 2 pieces, ~10% interstitial fibroadipose/vascular tissue, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 507 1185 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.986079 200084 0.982905 0.988742 0.867952 18903 1 76 0.00226341 221 0 7.35793e+07 0.0169011 843670 7.4417e+07 1.05312e+07 18911 3.66215e+07 0 0.114953 0.988742 0.858181 7.35793e+07 0.00340773 1.64062e+07 1.11546e+07 1.62369e+07 209 1.63107e+07 1.48255e+07 0.00283403 1.65122e+07 50.3069 0.0113371 0.991406 0 49.7408 GTEX-12WS9-0726-SM-5FQT7 1 C1 2 pieces, no abornmalities 6.5 Thyroid Thyroid 0002046 509 1183 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987804 245695 0.967101 0.991366 0.748611 23370 1 76 0.00231259 158 0 7.77159e+07 0.0326602 291731 7.83927e+07 1.12227e+07 23407 3.86219e+07 0 0.21849 0.991366 0.742147 7.77159e+07 0.00372842 1.6955e+07 8.13396e+06 1.71218e+07 170 1.71748e+07 1.20904e+07 0.00301796 1.71674e+07 49.9892 0.00372141 0.994928 0 50.2447 GTEX-12WS9-0826-SM-59HJX 1 C1 2 pieces, no abnormalities; incedental 'contaminating' fragment of lymph node ? mediastinal, encircled 6.5 Heart Heart - Atrial Appendage 0006631 510 1183 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.982123 241746 0.981506 0.988095 0.838853 22382 1 76 0.00253629 161 0 8.48206e+07 0.0182533 1.90067e+06 8.58425e+07 1.56557e+07 22398 4.2058e+07 0 0.142653 0.988095 0.828866 8.48206e+07 0.00902773 1.85442e+07 1.09359e+07 1.86405e+07 201 1.87698e+07 1.50795e+07 0.00576239 1.88809e+07 50.1476 0.0221413 0.994068 0 50.1296 GTEX-12WS9-1426-SM-5FQT3 2 C1 "6 pieces, mucosa up to 1mm thick;30-90 % of thickness but badly autolyzed, in some foci a ""3""" 5.8 Stomach Stomach 0000945 523 1174 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.986618 233628 0.975815 0.990752 0.786782 22866 1 76 0.00233129 207 0 8.39543e+07 0.023945 666918 8.47379e+07 1.27124e+07 22889 4.16979e+07 0 0.189033 0.990752 0.779506 8.39543e+07 0.00399986 1.8418e+07 9.77734e+06 1.85759e+07 205 1.86437e+07 1.43231e+07 0.00316209 1.86812e+07 50.0502 0.00787036 0.994887 0 50.2135 GTEX-12WS9-1526-SM-5FQT4 1 C1 6 pieces, squamous mucosa is 5% thickness, sloughed in some areas 6.2 Esophagus Esophagus - Mucosa 0006920 525 1173 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987469 269553 0.971194 0.990822 0.772792 22802 1 76 0.00226422 148 0 7.09896e+07 0.0286435 213255 7.16472e+07 9.41515e+06 22825 3.52603e+07 0 0.198402 0.990822 0.7657 7.09896e+07 0.00383028 1.5627e+07 1.12555e+07 1.58241e+07 153 1.58046e+07 1.27557e+07 0.0030446 1.58833e+07 50.1242 0.00297646 0.994175 0 50.3134 GTEX-12WS9-2826-SM-5FQU9 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 572 1137 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.987252 276383 0.946283 0.990877 0.723207 23486 1 76 0.00263112 125 0 6.67684e+07 0.0534245 1.02178e+06 6.73831e+07 9.341e+06 23508 3.31753e+07 0 0.223076 0.990877 0.71661 6.67684e+07 0.00398822 1.44237e+07 1.228e+07 1.44923e+07 149 1.4556e+07 7.39404e+06 0.00330719 1.45822e+07 50.045 0.0151637 0.994503 0 50.1185 GTEX-12WS9-2926-SM-5EGL8 1 C1 4 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 574 1136 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989824 362386 0.96535 0.992872 0.820076 23591 1 76 0.00215811 269 0 8.25068e+07 0.0342898 3.72281e+06 8.30991e+07 7.43997e+06 23610 4.10322e+07 0 0.145275 0.992872 0.81423 8.25068e+07 0.00320765 1.80427e+07 1.92355e+07 1.81487e+07 267 1.80964e+07 1.01445e+07 0.00268127 1.83146e+07 50.2995 0.0447997 0.995919 0 50.1463 GTEX-12WS9-3026-SM-5EGIE 1 C1 1 piece, all adenohypophysis; no abnormalities 7.1 Pituitary Pituitary 0000007 575 1135 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.986663 236475 0.965126 0.990534 0.760948 24037 1 76 0.00244997 130 0 6.79013e+07 0.0345813 313445 6.85502e+07 8.87177e+06 24069 3.37321e+07 0 0.204178 0.990534 0.753745 6.79013e+07 0.00546779 1.49447e+07 9.02102e+06 1.50671e+07 144 1.51435e+07 1.08331e+07 0.00395298 1.51196e+07 49.9605 0.00457249 0.994405 0 50.204 GTEX-12WSA-0001-SM-5ANGH C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSA-0001-SM-5DWRG C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSA-0001-SM-7DRQ8 C1 Blood Whole Blood 0013756 858 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSA-0005-SM-5O9BM C1 7 Blood Whole Blood 0013756 858 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4910 04/01/2014 TruSeq.v1 EXCLUDE 0.97463 598554 0.971447 0.977426 0.813279 16894 1 76 0.00406872 149 0 8.93905e+07 0.0276213 718104 9.1455e+07 3.7403e+06 16901 4.43978e+07 0 0.158168 0.977426 0.79492 8.93905e+07 0.00552523 2.01882e+07 9.584e+07 2.04744e+07 156 2.04764e+07 2.04016e+07 0.00479489 2.04531e+07 49.9716 0.00785199 0.980222 0 50.3519 GTEX-12WSA-0008-SM-5TDC3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 936 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990109 511576 0.978361 0.99341 0.874024 21167 1 76 0.00185145 284 0 9.77919e+07 0.0213553 334454 9.84407e+07 1.2261e+07 21182 4.86388e+07 0 0.104336 0.99341 0.868265 9.77919e+07 0.00341141 2.19716e+07 1.51071e+07 2.19465e+07 267 2.20163e+07 2.51879e+07 0.00262884 2.22251e+07 50.2361 0.00339752 0.996711 0 49.9714 GTEX-12WSA-0011-R10a-SM-AHZMV C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 862 ChIP-Seq GTEX-12WSA-0011-R10b-SM-5P9ET C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.988272 1.02872e+06 0.959273 0.988639 0.827177 24283 1 76 0.00267646 375 0 1.3588e+08 0.0404811 1.12737e+07 1.37442e+08 4.48004e+06 24301 6.76366e+07 0 0.132096 0.988639 0.817779 1.3588e+08 0.00338984 2.91657e+07 5.52545e+07 2.9777e+07 416 2.93618e+07 1.35632e+07 0.00303302 2.96366e+07 50.2329 0.0820257 0.989006 0 50.5185 GTEX-12WSA-0011-R10b-SM-CYKPQ C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 RIP-Seq GTEX-12WSA-0011-R2a-SM-57WDK C1, A1 5.8 Brain Brain - Substantia nigra 0002038 862 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990142 496840 0.96553 0.992704 0.847708 22508 1 76 0.0017457 271 0 7.44812e+07 0.0342513 7.41066e+06 7.50286e+07 8.46897e+06 22523 3.70477e+07 0 0.117822 0.992704 0.841523 7.44812e+07 0.0035797 1.64957e+07 1.46972e+07 1.65961e+07 275 1.63786e+07 7.69936e+06 0.00266033 1.68862e+07 50.7629 0.0987711 0.995266 0 50.1516 GTEX-12WSA-0011-R4a-SM-57WB7 C1, A1 6.5 Brain Brain - Amygdala 0001876 862 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.985562 468361 0.968446 0.988644 0.850195 21285 1 76 0.00174597 368 0 7.38733e+07 0.0313877 9.79333e+06 7.47219e+07 8.86128e+06 21297 3.67211e+07 0 0.118251 0.988644 0.840539 7.38733e+07 0.00363148 1.6265e+07 2.62105e+07 1.63022e+07 345 1.59658e+07 5.30191e+06 0.00268579 1.67919e+07 51.2609 0.131064 0.991725 0 50.0571 GTEX-12WSA-0011-R5b-SM-5GU5I C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 862 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990989 856477 0.955413 0.993453 0.865525 22003 1 76 0.00161617 275 0 7.40136e+07 0.0442391 3.77896e+06 7.45014e+07 4.5703e+06 22014 3.68016e+07 0 0.0898885 0.993453 0.859858 7.40136e+07 0.00245493 1.61098e+07 2.39185e+07 1.62901e+07 260 1.61009e+07 1.01927e+07 0.00203451 1.64868e+07 50.5921 0.0507234 0.995916 0 50.2784 GTEX-12WSA-0011-R7b-SM-5GU5U C1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 862 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.99096 724420 0.953635 0.993549 0.845524 21723 1 76 0.00165424 198 0 6.59752e+07 0.0461643 4.77074e+06 6.64036e+07 4.18343e+06 21733 3.28016e+07 0 0.108111 0.993549 0.840069 6.59752e+07 0.00268731 1.42697e+07 2.37142e+07 1.43772e+07 233 1.41406e+07 6.16735e+06 0.00216943 1.46919e+07 50.956 0.0718446 0.996137 0 50.1876 GTEX-12WSA-0011-R8a-SM-5P9EX C1, A1 6.9 Brain Brain - Hypothalamus 0001898 862 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991787 1.04443e+06 0.954348 0.991985 0.827122 24893 1 76 0.00278767 378 0 1.40993e+08 0.0454108 9.83549e+06 1.42132e+08 4.63576e+06 24921 7.01919e+07 0 0.127226 0.991985 0.820492 1.40993e+08 0.0034802 3.04606e+07 3.76054e+07 3.12781e+07 406 3.07386e+07 1.47564e+07 0.00313387 3.10143e+07 50.2232 0.0691997 0.992184 0 50.662 GTEX-12WSA-0226-SM-5BC5V 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 934 1417 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98547 303898 0.969148 0.99058 0.799171 23153 1 76 0.00259699 161 0 6.97328e+07 0.030646 439781 7.03959e+07 1.82076e+07 23171 3.45909e+07 0 0.169977 0.99058 0.791643 6.97328e+07 0.00501774 1.52578e+07 8.9762e+06 1.5394e+07 163 1.54514e+07 1.1905e+07 0.00380112 1.55434e+07 50.1484 0.00624726 0.995691 0 50.2223 GTEX-12WSA-0326-SM-5BC6I 0 C1 2 pieces, ~10-15% fibro-fascial elements, rep. delineated 6 Adipose Tissue Adipose - Subcutaneous 0002190 938 1414 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988121 251996 0.969844 0.991842 0.780029 22690 1 76 0.00257957 137 0 6.19358e+07 0.0298932 295697 6.24452e+07 1.54714e+07 22715 3.07647e+07 0 0.189814 0.991842 0.773666 6.19358e+07 0.00493918 1.34907e+07 7.38319e+06 1.3597e+07 147 1.36159e+07 9.63668e+06 0.00375495 1.36928e+07 50.1409 0.0047353 0.995563 0 50.1962 GTEX-12WSA-0426-SM-5EQ5X 0 C1 6 pieces, minimal dermal fat, focal nubbin delineated; squamous epithelium is ~30-40 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 940 1412 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.987794 392934 0.96715 0.991143 0.754439 23787 1 76 0.00201197 167 0 7.38065e+07 0.0326639 596457 7.44661e+07 8.93843e+06 23823 3.66584e+07 0 0.212711 0.991143 0.747757 7.38065e+07 0.0033937 1.61874e+07 9.28004e+06 1.63097e+07 178 1.62767e+07 1.05589e+07 0.0027005 1.64568e+07 50.2751 0.00800978 0.994491 0 50.1882 GTEX-12WSA-0726-SM-5FQU2 0 C1 2 pieces, 10-20% interstitial fat/vascular elements, rep delineated 7.4 Muscle Muscle - Skeletal 0011907 955 1399 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989202 245339 0.976347 0.992724 0.838648 23675 1 76 0.00191069 286 0 8.659e+07 0.0234184 791295 8.72247e+07 1.34818e+07 23694 4.30632e+07 0 0.137699 0.992724 0.832546 8.659e+07 0.00305765 1.88249e+07 1.1961e+07 1.87868e+07 259 1.88401e+07 1.76372e+07 0.00248213 1.90534e+07 50.2815 0.00907192 0.996247 0 49.9494 GTEX-12WSA-1026-SM-5EGHN 1 C1 2 pieces, mild hylaline membrane deposition, mild-moderate emphysematous changes 6.4 Lung Lung 0008952 980 1376 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.981231 163084 0.969602 0.986644 0.791254 23044 1 76 0.00241633 138 0 6.20657e+07 0.0300791 234475 6.29059e+07 1.00291e+07 23073 3.07819e+07 0 0.178349 0.986644 0.780685 6.20657e+07 0.00576483 1.3585e+07 6.41406e+06 1.3692e+07 145 1.37485e+07 9.88273e+06 0.00408139 1.38449e+07 50.1746 0.00372739 0.992056 0 50.196 GTEX-12WSA-1026-SM-CYKQ3 1 C1 2 pieces, mild hylaline membrane deposition, mild-moderate emphysematous changes 6.4 Lung Lung 0008952 980 1376 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 RIP-Seq GTEX-12WSA-1126-SM-5EGKU 1 C1 2 pieces, no abnormalities 6.2 Heart Heart - Atrial Appendage 0006631 987 1369 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986506 268264 0.974082 0.990935 0.792878 21934 1 76 0.00174427 151 0 6.92259e+07 0.0257399 1.77894e+06 6.98591e+07 6.67604e+06 21952 3.43776e+07 0 0.181204 0.990935 0.785691 6.92259e+07 0.00305259 1.50911e+07 1.44046e+07 1.50255e+07 194 1.51047e+07 8.5985e+06 0.0023955 1.52753e+07 50.2808 0.0254647 0.995364 0 49.891 GTEX-12WSA-1426-SM-5EGJU 1 C1 6 pieces, Squamous mucosa is ~0.2mm, ~10% thickness 6 Esophagus Esophagus - Mucosa 0006920 994 1364 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988841 255856 0.969826 0.992212 0.793234 23202 1 76 0.00182063 167 0 7.57378e+07 0.0299674 531818 7.63323e+07 6.85824e+06 23226 3.76433e+07 0 0.176592 0.992212 0.787056 7.57378e+07 0.00296484 1.67109e+07 8.20626e+06 1.68398e+07 182 1.68746e+07 1.30937e+07 0.00239079 1.6923e+07 50.0716 0.00696715 0.995583 0 50.1921 GTEX-12WSA-1626-SM-5EGJV 1 C1 2 pieces, ~10% fibrous/mesothelial hyperplastic tissue, rep delineated 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 998 1361 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988012 280354 0.973975 0.991567 0.804368 22922 1 76 0.00181139 165 0 7.45108e+07 0.0257417 441253 7.51444e+07 6.60522e+06 22944 3.69922e+07 0 0.169608 0.991567 0.797585 7.45108e+07 0.00317935 1.63359e+07 8.96167e+06 1.63963e+07 183 1.64132e+07 1.27048e+07 0.00249292 1.65725e+07 50.2414 0.00587207 0.995123 0 50.0922 GTEX-12WSA-2926-SM-5EQ4D 1 C1 4 pieces, no abnormalities 5.8 Brain Brain - Cortex 0001870 1036 1332 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991116 265319 0.973127 0.993765 0.830145 22839 1 76 0.00178847 267 0 7.81126e+07 0.0266357 5.13218e+06 7.86026e+07 9.20452e+06 22854 3.88652e+07 0 0.142982 0.993765 0.824969 7.81126e+07 0.00294699 1.72035e+07 2.30321e+07 1.71154e+07 307 1.69842e+07 7.25753e+06 0.00236619 1.75242e+07 50.7824 0.0652927 0.996415 0 49.8716 GTEX-12WSB-0001-SM-5DU3Y C1 Blood Whole Blood 0013756 1007 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSB-0001-SM-7DRQC C1 Blood Whole Blood 0013756 1007 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-12WSB-0006-SM-5O998 C1 7.9 Blood Whole Blood 0013756 1007 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.985665 1.24065e+06 0.942391 0.989155 0.717389 21352 1 76 0.00284882 139 0 8.98792e+07 0.0567676 139814 9.08647e+07 1.22271e+07 21379 4.46276e+07 0 0.225002 0.989155 0.709609 8.98792e+07 0.00478291 1.95008e+07 8.67628e+07 1.97481e+07 159 1.98168e+07 1.60541e+07 0.00381245 1.97768e+07 49.9495 0.00153871 0.992644 0 50.315 GTEX-12WSB-0008-SM-5TDC5 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1107 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.991068 442806 0.974453 0.993883 0.853086 22287 1 76 0.00198721 283 0 9.55637e+07 0.0251982 423740 9.61518e+07 1.14853e+07 22308 4.75469e+07 0 0.121367 0.993883 0.847867 9.55637e+07 0.00358141 2.12212e+07 1.38023e+07 2.12665e+07 264 2.13052e+07 2.21398e+07 0.00278205 2.14503e+07 50.1697 0.00440699 0.996699 0 50.0532 GTEX-12WSB-0011-R11b-SM-57WBJ C1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1015 BP-43579 RNA isolation_PAXgene Tissue miRNA 09/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 EXCLUDE 0.987452 676642 0.946209 0.99115 0.771568 22874 1 76 0.00242923 265 0 7.98186e+07 0.0536254 4.928e+06 8.05313e+07 9.54547e+06 22898 3.96406e+07 0 0.174641 0.99115 0.76474 7.98186e+07 0.00449868 1.72841e+07 2.35826e+07 1.71953e+07 260 1.71227e+07 5.33883e+06 0.00346009 1.76153e+07 50.709 0.0611935 0.994849 0 49.8711 GTEX-12WSB-0011-R1b-SM-5P9EY C1, A1 6.1 Brain Brain - Hippocampus 0001954 1015 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.990648 630088 0.963602 0.991 0.809002 23646 1 76 0.00326758 379 0 1.27658e+08 0.0362165 1.07687e+07 1.28817e+08 4.08518e+06 23673 6.35685e+07 0 0.1546 0.991 0.801721 1.27658e+08 0.00394176 2.74328e+07 4.94867e+07 2.82625e+07 384 2.76316e+07 1.06402e+07 0.00360455 2.80807e+07 50.4031 0.0835972 0.991352 0 50.7448 GTEX-12WSB-0011-R5b-SM-5GU67 C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990372 846861 0.95695 0.993193 0.845648 22960 1 76 0.00201196 200 0 7.47254e+07 0.042676 3.79362e+06 7.52375e+07 4.55979e+06 22971 3.71337e+07 0 0.111302 0.993193 0.839892 7.47254e+07 0.00290044 1.6178e+07 2.32076e+07 1.63419e+07 243 1.6171e+07 9.03424e+06 0.00245494 1.65558e+07 50.5879 0.0504219 0.996013 0 50.252 GTEX-12WSB-0011-R6b-SM-5GU6J C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.986206 992312 0.95323 0.990052 0.861836 21773 1 76 0.00216299 204 0 7.36015e+07 0.0465302 5.98294e+06 7.4341e+07 5.04525e+06 21781 3.65382e+07 0 0.0913937 0.990052 0.853262 7.36015e+07 0.00315393 1.58263e+07 2.83316e+07 1.61897e+07 249 1.59632e+07 8.11124e+06 0.00265654 1.63328e+07 50.5722 0.0804797 0.993897 0 50.5674 GTEX-12WSB-0011-R7b-SM-5GU6V C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 1015 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.987557 897548 0.952609 0.99097 0.863272 20995 1 76 0.00200523 163 0 6.19622e+07 0.0471319 3.92746e+06 6.25268e+07 3.98026e+06 21005 3.07802e+07 0 0.089337 0.99097 0.855476 6.19622e+07 0.00302316 1.34748e+07 2.34687e+07 1.34775e+07 193 1.33347e+07 7.37671e+06 0.00251244 1.38354e+07 50.9214 0.0628124 0.994383 0 50.0051 GTEX-12WSB-0126-SM-59HJN 0 C1 6 pieces; well trimmed; <10% intradermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1106 548 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.98143 249506 0.971049 0.987453 0.781747 25094 1 76 0.00263058 192 0 8.08656e+07 0.0286692 335110 8.18931e+07 1.42987e+07 25126 4.00873e+07 0 0.189301 0.987453 0.771939 8.08656e+07 0.00867867 1.7502e+07 9.10134e+06 1.76116e+07 166 1.77823e+07 1.4455e+07 0.00563618 1.77821e+07 49.9997 0.00409204 0.993476 0 50.156 GTEX-12WSB-0226-SM-5GCOR 0 C1 2 pieces 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1109 545 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.984345 209523 0.972952 0.989357 0.763842 22600 1 76 0.00228083 123 0 5.53148e+07 0.0267118 310175 5.59099e+07 4.73269e+06 22624 2.7435e+07 0 0.20911 0.989357 0.755712 5.53148e+07 0.0035682 1.21177e+07 5.26617e+06 1.21561e+07 126 1.22348e+07 9.28281e+06 0.00292125 1.23051e+07 50.1434 0.00554777 0.994368 0 50.0789 GTEX-12WSB-0326-SM-5GCP4 1 C1 2 pieces; 10-20% internal fat 7.6 Muscle Muscle - Skeletal 0011907 1113 542 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.983183 229187 0.978391 0.988614 0.838161 20780 1 76 0.00199252 140 0 6.4456e+07 0.0213173 777155 6.51984e+07 5.72873e+06 20793 3.19797e+07 0 0.14023 0.988614 0.828617 6.4456e+07 0.00323173 1.38139e+07 6.49589e+06 1.38286e+07 146 1.39164e+07 1.31762e+07 0.00260872 1.40449e+07 50.2299 0.0119199 0.994045 0 50.0266 GTEX-12WSB-0426-SM-5BC6H 0 C1 2 pieces; 0.4 mm fat surrounding each piece 5.9 Nerve Nerve - Tibial 0001323 1115 540 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.984625 303195 0.960752 0.98961 0.686557 25260 1 76 0.00292207 155 0 7.77318e+07 0.0390123 345286 7.85479e+07 2.31618e+07 25307 3.85456e+07 0 0.274195 0.98961 0.679423 7.77318e+07 0.00515547 1.68637e+07 9.35348e+06 1.70562e+07 160 1.7142e+07 9.9211e+06 0.00403315 1.71508e+07 50.0129 0.00439587 0.994594 0 50.2838 GTEX-12WSB-0626-SM-59HJO 1 C1 2 pieces; atrophic fatty mammary tissue 6.5 Breast Breast - Mammary Tissue 0008367 1122 534 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.980689 272388 0.971644 0.986143 0.765757 24390 1 76 0.00270716 168 0 9.0835e+07 0.0280456 751836 9.21114e+07 1.52242e+07 24428 4.50489e+07 0 0.205888 0.986143 0.755146 9.0835e+07 0.00874986 1.9816e+07 1.0038e+07 1.9895e+07 202 2.00318e+07 1.41535e+07 0.0057118 2.01328e+07 50.1257 0.00816225 0.991597 0 50.0995 GTEX-12WSB-0726-SM-5N9GD 2 C1 2 pieces; fibrosis and lymphoid infiltrate consistent with Hashimoto thyroiditis with nodular goiter 5.7 Thyroid Thyroid 0002046 1129 528 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.986126 304029 0.967165 0.987574 0.74125 25965 1 76 0.00413954 208 0 9.79329e+07 0.032566 421809 9.91651e+07 4.71666e+06 26005 4.86512e+07 0 0.225916 0.987574 0.732039 9.79329e+07 0.00423337 2.14071e+07 9.68533e+06 2.14346e+07 221 2.14179e+07 1.52235e+07 0.00418638 2.15647e+07 50.1707 0.0042536 0.989022 0 50.0321 GTEX-12WSB-2226-SM-5GCOS 1 C1 2 pieces; atrophic with follicles and corpora albicans 5.9 Ovary Ovary 0000992 1158 506 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.983689 345939 0.954683 0.988799 0.702384 23615 1 76 0.0022168 136 0 6.34038e+07 0.0451161 194808 6.41221e+07 5.48425e+06 23657 3.14453e+07 0 0.252298 0.988799 0.694517 6.34038e+07 0.00356645 1.35566e+07 1.45687e+07 1.37387e+07 128 1.38115e+07 1.10122e+07 0.00288814 1.38025e+07 49.9836 0.00303808 0.99391 0 50.3336 GTEX-12WSB-2426-SM-5EGJC 2 C1 6 pieces; epitheliall desquamation; stroma 6.7 Vagina Vagina 0000996 1163 502 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 EXCLUDE 0.989679 238027 0.969321 0.992424 0.738553 24287 1 76 0.0020204 143 0 7.13095e+07 0.030453 260284 7.18538e+07 5.84386e+06 24319 3.54595e+07 0 0.230769 0.992424 0.732958 7.13095e+07 0.00313913 1.57568e+07 8.34714e+06 1.59447e+07 155 1.597e+07 1.13336e+07 0.00257822 1.59201e+07 49.9216 0.00362241 0.995169 0 50.2962 GTEX-12WSB-2926-SM-59HKL 1 C1 6 pieces; hyperkeratotic 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1173 495 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.98187 336242 0.9749 0.987853 0.771705 24377 1 76 0.00267523 173 0 8.96113e+07 0.0248479 529354 9.07132e+07 1.69069e+07 24408 4.44112e+07 0 0.203196 0.987853 0.762331 8.96113e+07 0.0087876 1.961e+07 1.1598e+07 1.97905e+07 180 1.99724e+07 1.5899e+07 0.0057129 1.99337e+07 49.9516 0.00583547 0.993836 0 50.229 GTEX-12WSB-3026-SM-59HKM 1 C1 4 pieces 6.7 Brain Brain - Cerebellum 0002037 1187 481 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.981787 241999 0.953145 0.987495 0.763182 22842 1 76 0.00284016 105 0 5.81344e+07 0.0465894 1.53213e+06 5.88706e+07 1.04768e+07 22858 2.8827e+07 0 0.189962 0.987495 0.753639 5.81344e+07 0.00893399 1.26794e+07 1.01857e+07 1.26122e+07 135 1.26778e+07 5.99161e+06 0.00586946 1.29077e+07 50.4493 0.0260255 0.993204 0 49.867 GTEX-12WSB-3226-SM-59HJP 1 C1 1 piece; anterior and posterior present 6.8 Pituitary Pituitary 0000007 1190 479 BP-44902 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.980662 300243 0.957723 0.987253 0.750587 25574 1 76 0.00266893 133 0 7.75558e+07 0.0420509 510390 7.85571e+07 1.50831e+07 25616 3.84158e+07 0 0.207136 0.987253 0.741019 7.75558e+07 0.0087272 1.62862e+07 1.01295e+07 1.64153e+07 161 1.65794e+07 1.10935e+07 0.00567784 1.65865e+07 50.0107 0.00649705 0.993843 0 50.1974 GTEX-12WSC-0001-SM-5ANGC C1 Blood Whole Blood 0013756 664 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSC-0001-SM-5DWRP C1 Blood Whole Blood 0013756 664 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSC-0005-SM-5MR3H C1 9.1 Blood Whole Blood 0013756 664 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99234 643368 0.966427 0.992939 0.731525 20358 1 76 0.00325714 146 0 8.41204e+07 0.0329847 262844 8.47186e+07 3.17817e+06 20379 4.18812e+07 0 0.234903 0.992939 0.726359 8.41204e+07 0.00349938 1.86748e+07 3.10543e+07 1.87939e+07 156 1.87894e+07 1.53745e+07 0.00337819 1.875e+07 49.9476 0.00310255 0.993537 0 50.1589 GTEX-12WSC-0008-SM-664MK C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 788 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992953 466350 0.973004 0.993625 0.841721 21397 1 76 0.00203156 228 0 9.50144e+07 0.0266665 356782 9.56239e+07 5.81001e+06 21418 4.73319e+07 0 0.131282 0.993625 0.836356 9.50144e+07 0.00283756 2.12251e+07 1.6372e+07 2.13257e+07 229 2.12854e+07 2.30058e+07 0.00243429 2.13403e+07 50.0644 0.00373109 0.994298 0 50.1182 GTEX-12WSC-0011-R10a-SM-5GU57 C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989523 683746 0.956993 0.992411 0.866518 22174 1 76 0.0020472 190 0 6.6399e+07 0.0426637 2.56915e+06 6.69067e+07 4.46706e+06 22186 3.30089e+07 0 0.0904748 0.992411 0.859942 6.6399e+07 0.00302558 1.4441e+07 1.58799e+07 1.45294e+07 208 1.44342e+07 7.8237e+06 0.00253497 1.4729e+07 50.5053 0.038399 0.995299 0 50.1526 GTEX-12WSC-0011-R11a-SM-5GU5J C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991214 935893 0.935637 0.993421 0.811341 21740 1 76 0.0019262 134 0 6.53379e+07 0.0636525 1.27794e+06 6.57706e+07 4.2231e+06 21753 3.24943e+07 0 0.124296 0.993421 0.806003 6.53379e+07 0.00273361 1.38812e+07 2.53252e+07 1.39936e+07 162 1.39897e+07 1.01801e+07 0.00232901 1.40484e+07 50.1046 0.0194302 0.995628 0 50.2017 GTEX-12WSC-0011-R3a-SM-5P9F1 C1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992426 1.00683e+06 0.956744 0.992737 0.839075 24815 1 76 0.00315212 375 0 1.36881e+08 0.0429276 1.02335e+07 1.37882e+08 4.46376e+06 24835 6.81738e+07 0 0.117669 0.992737 0.832981 1.36881e+08 0.00374591 2.94678e+07 4.51577e+07 3.00492e+07 358 2.97217e+07 1.51275e+07 0.00344892 2.98338e+07 50.0941 0.0742189 0.993048 0 50.4884 GTEX-12WSC-0011-R5b-SM-5CVNS C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986792 570410 0.956498 0.990862 0.832088 23927 1 76 0.00515551 153 0 7.52483e+07 0.043184 4.61124e+06 7.59423e+07 1.42067e+07 23943 3.73418e+07 0 0.12441 0.990862 0.824484 7.52483e+07 0.0074697 1.63115e+07 2.04483e+07 1.6348e+07 199 1.63605e+07 8.3995e+06 0.00630785 1.65821e+07 50.3365 0.0607204 0.994931 0 50.0559 GTEX-12WSC-0011-R6b-SM-5LU99 C1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989974 500266 0.95653 0.992083 0.838905 23229 1 76 0.0047869 147 0 6.50594e+07 0.0431475 4.1352e+06 6.55786e+07 5.78302e+06 23244 3.23434e+07 0 0.117625 0.992083 0.832263 6.50594e+07 0.00415096 1.41101e+07 1.40912e+07 1.42492e+07 172 1.41897e+07 7.50053e+06 0.0044696 1.43115e+07 50.2138 0.0630572 0.994191 0 50.2452 GTEX-12WSC-0011-R7b-SM-5LU9L C1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990083 501476 0.955836 0.992577 0.82977 23043 1 76 0.0047085 127 0 5.98066e+07 0.0438165 2.73231e+06 6.02539e+07 5.41366e+06 23057 2.9727e+07 0 0.126066 0.992577 0.82361 5.98066e+07 0.00411103 1.29167e+07 1.33555e+07 1.31104e+07 151 1.30785e+07 7.2196e+06 0.00441052 1.30993e+07 50.0396 0.0453466 0.99507 0 50.372 GTEX-12WSC-0011-R9a-SM-5GU4U C1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 680 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.989205 665146 0.956921 0.992091 0.832064 24513 1 76 0.00224223 378 0 9.10318e+07 0.0428083 6.13220e+06 9.17575e+07 6.01731e+06 24535 4.52482e+07 0 0.124857 0.992091 0.825483 9.10318e+07 0.00321113 1.98808e+07 2.05482e+07 2.02014e+07 349 1.99576e+07 9.83176e+06 0.00272527 2.0376e+07 50.5186 0.0668305 0.994977 0 50.4 GTEX-12WSC-0126-SM-5EQ4P 1 C1 6 pieces, well trimmed but with ~10% intradermal fat, squamous epithelium measures ~33 microns; specimen sequenced and fingerprint confirmed as match to other donor specimens 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 787 479 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989394 301743 0.9713 0.992554 0.786745 23785 1 76 0.00212402 197 0 8.12258e+07 0.0283757 204444 8.18351e+07 1.1002e+07 23817 4.03892e+07 0 0.184555 0.992554 0.780887 8.12258e+07 0.00332279 1.7546e+07 9.67411e+06 1.77118e+07 190 1.7783e+07 1.47779e+07 0.0027215 1.77138e+07 49.9025 0.00249824 0.995714 0 50.2352 GTEX-12WSC-0226-SM-5EQ52 0 C1 2 pieces, one includes several large vessels 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 790 477 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.98778 289947 0.972155 0.991403 0.772581 23481 1 76 0.00224563 168 0 7.41933e+07 0.0275005 395879 7.48367e+07 1.01229e+07 23513 3.68645e+07 0 0.199574 0.991403 0.765939 7.41933e+07 0.00328014 1.62007e+07 8.2957e+06 1.63838e+07 171 1.64528e+07 1.18743e+07 0.00276099 1.63874e+07 49.9003 0.00528991 0.995025 0 50.281 GTEX-12WSC-0326-SM-5EQ5E 0 C1 2 pieces 8.4 Muscle Muscle - Skeletal 0011907 793 474 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991818 261717 0.98299 0.993873 0.876806 18806 1 76 0.00194164 124 0 6.24529e+07 0.0167588 875947 6.28379e+07 7.02052e+06 18811 3.10978e+07 0 0.106184 0.993873 0.871434 6.24529e+07 0.00292386 1.35335e+07 7.4393e+06 1.35597e+07 141 1.35279e+07 1.33622e+07 0.00243173 1.36806e+07 50.2806 0.0139398 0.995928 0 50.0483 GTEX-12WSC-0526-SM-5BC5X 1 C1 2 pieces, no lesions 6.7 Blood Vessel Artery - Tibial 0007610 816 452 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988303 242271 0.972955 0.992014 0.811741 20888 1 76 0.00273539 140 0 6.42577e+07 0.0266779 500191 6.4775e+07 1.62225e+07 20903 3.192e+07 0 0.161214 0.992014 0.805259 6.42577e+07 0.00495402 1.37226e+07 6.80164e+06 1.38435e+07 148 1.38647e+07 1.09167e+07 0.00384056 1.39226e+07 50.1041 0.00772198 0.995724 0 50.2192 GTEX-12WSC-0826-SM-5EQ5Q 2 C1 2 pieces 7.4 Thyroid Thyroid 0002046 835 435 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989613 251819 0.970495 0.991966 0.776686 23460 1 76 0.00210384 129 0 5.9661e+07 0.0291422 109587 6.01442e+07 7.18932e+06 23488 2.96798e+07 0 0.193808 0.991966 0.770447 5.9661e+07 0.00316519 1.30465e+07 7.33352e+06 1.31973e+07 130 1.32244e+07 1.09849e+07 0.00263326 1.3152e+07 49.8628 0.00182207 0.99432 0 50.2874 GTEX-12WSC-0926-SM-5EQ63 2 C1 2 pieces, one includes 50% fat and cardiac muscle 7.2 Blood Vessel Artery - Coronary 0001621 845 426 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767,LCSET-5038,LCSET-5131 03/08/2014 TruSeq.v1 RNASEQ 0.985315 513660 0.975859 0.989787 0.786562 23390 1 76 0.00258376 279 0 1.15195e+08 0.0237007 576936 1.16384e+08 6.78919e+06 23418 5.71404e+07 0 0.189298 0.989787 0.778529 1.15195e+08 0.00335179 2.48158e+07 1.69782e+07 2.51229e+07 328 2.52109e+07 1.9838e+07 0.00296604 2.52156e+07 50.0047 0.00495718 0.99426 0 50.3075 GTEX-12WSC-1026-SM-5EQ5Y 0 C1 2 pieces, atrial appendage with interstitial fibrosis and hypertrophy of myocytes 7.4 Heart Heart - Atrial Appendage 0006631 840 433 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990361 253653 0.974547 0.993304 0.798635 22004 1 76 0.0021661 112 0 6.06021e+07 0.0251512 1.17856e+06 6.10106e+07 7.31682e+06 22027 3.01372e+07 0 0.175913 0.993304 0.793287 6.06021e+07 0.00327968 1.31337e+07 6.67022e+06 1.31645e+07 137 1.3208e+07 1.04395e+07 0.00272124 1.32569e+07 50.0924 0.0193173 0.996248 0 50.0587 GTEX-12WSC-1126-SM-5EQ4G 1 C1 2 pieces, interstitial/focal patchy fibrosis 6.4 Heart Heart - Left Ventricle 0006566 842 431 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991762 419023 0.972916 0.994124 0.84835 20930 1 76 0.00224273 131 0 6.16947e+07 0.026846 3.40823e+06 6.20594e+07 7.05865e+06 20946 3.0687e+07 0 0.124565 0.994124 0.843365 6.16947e+07 0.00344503 1.36309e+07 1.20589e+07 1.3579e+07 153 1.35755e+07 1.02184e+07 0.00284245 1.37787e+07 50.3714 0.0549189 0.996485 0 49.9046 GTEX-12WSC-1726-SM-5GCN3 0 C1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 853 424 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983462 345447 0.970165 0.988696 0.798277 23549 1 76 0.00222319 171 0 7.71829e+07 0.0295369 228511 7.80653e+07 7.13206e+06 23573 3.82896e+07 0 0.171888 0.988696 0.789253 7.71829e+07 0.00343911 1.68267e+07 1.19473e+07 1.69685e+07 185 1.70807e+07 1.32074e+07 0.00282793 1.71046e+07 50.0349 0.00292718 0.99393 0 50.2099 GTEX-12WSC-2826-SM-5BC5Y 1 C1 6 pieces, predominantly well trimmed with minimal internal and attached fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 879 406 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983805 310109 0.970822 0.987927 0.759014 23959 1 76 0.00286035 136 0 6.3377e+07 0.0289465 308432 6.41515e+07 1.80371e+07 23986 3.14575e+07 0 0.211808 0.987927 0.749851 6.3377e+07 0.00522183 1.38636e+07 8.52838e+06 1.40123e+07 143 1.40587e+07 9.61759e+06 0.00403616 1.40684e+07 50.0171 0.00480787 0.99205 0 50.2666 GTEX-12WSC-2926-SM-5BC5Z 1 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 887 399 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986337 427497 0.948042 0.990386 0.734059 23635 1 76 0.00312794 157 0 7.83008e+07 0.0515355 1.02398e+06 7.9061e+07 2.23534e+07 23656 3.887e+07 0 0.213984 0.990386 0.727001 7.83008e+07 0.00521924 1.68344e+07 1.53172e+07 1.70158e+07 173 1.70975e+07 9.90111e+06 0.00416931 1.70438e+07 49.9214 0.0129518 0.994434 0 50.268 GTEX-12WSC-3026-SM-5GCNF 1 C1 4 pieces, includes adherent meninges 6.7 Brain Brain - Cortex 0001870 889 397 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985298 247685 0.969756 0.990205 0.838929 23170 1 76 0.00244174 197 0 7.21822e+07 0.029882 2.79967e+06 7.28962e+07 6.46104e+06 23185 3.58324e+07 0 0.130826 0.990205 0.830712 7.21822e+07 0.00363415 1.58248e+07 1.26216e+07 1.58627e+07 236 1.59493e+07 8.6557e+06 0.00303499 1.60483e+07 50.1546 0.0384063 0.995112 0 50.0597 GTEX-12WSC-3126-SM-5GCNB 2 C1 1 piece, adenohypophysis, neurohypophysis, and small portion of pars intermedia 6.6 Pituitary Pituitary 0000007 890 397 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984605 231494 0.965923 0.989632 0.770089 25218 1 76 0.00225683 135 0 6.7681e+07 0.0337779 394739 6.83901e+07 6.18197e+06 25249 3.35864e+07 0 0.195834 0.989632 0.762104 6.7681e+07 0.00358296 1.45248e+07 7.61166e+06 1.46244e+07 153 1.47261e+07 1.05722e+07 0.00291653 1.47417e+07 50.0264 0.00577187 0.994659 0 50.1707 GTEX-12WSD-0002-SM-5ANGA C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSD-0002-SM-5DWRK C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSD-0002-SM-6WSCG C1 Blood Whole Blood 0013756 409 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSD-0005-SM-5N9FZ C1 8.9 Blood Whole Blood 0013756 409 BP-41899 RNA isolation_PAXgene Blood RNA (Manual) 08/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.981503 566572 0.973065 0.983007 0.774721 21922 1 76 0.00454134 160 0 1.00763e+08 0.0262804 308902 1.02505e+08 4.85523e+06 21949 5.00809e+07 0 0.198344 0.983007 0.761556 1.00763e+08 0.00450573 2.29174e+07 6.6538e+07 2.30268e+07 181 2.30639e+07 2.22345e+07 0.00452356 2.30382e+07 49.9721 0.00301353 0.984511 0 50.1191 GTEX-12WSD-0008-SM-664ME C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 484 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993594 463449 0.981109 0.994336 0.863763 21191 1 76 0.00205289 293 0 1.26482e+08 0.0185629 292083 1.27202e+08 7.42084e+06 21218 6.3031e+07 0 0.117347 0.994336 0.85887 1.26482e+08 0.0027604 2.8641e+07 1.4533e+07 2.86918e+07 315 2.86791e+07 3.22941e+07 0.00240638 2.87516e+07 50.0631 0.00229621 0.995079 0 50.0443 GTEX-12WSD-0011-R10b-SM-5GU79 C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 423 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 EXCLUDE 0.990377 888824 0.947581 0.993121 0.859651 20605 1 76 0.00202209 155 0 5.80824e+07 0.0521412 3.29306e+06 5.84847e+07 3.50628e+06 20611 2.88725e+07 0 0.0879299 0.993121 0.853737 5.80824e+07 0.00301065 1.25589e+07 2.2839e+07 1.26594e+07 181 1.24802e+07 6.43375e+06 0.002515 1.28868e+07 50.8015 0.0563064 0.995864 0 50.1991 GTEX-12WSD-0011-R11a-SM-9OSVC C1, A1 6.1 Brain Brain - Cerebellar Hemisphere 0002037 423 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989857 353109 0.94474 0.992287 0.774271 23141 1 76 0.0030138 270 0 8.93089e+07 0.0550285 2.67572e+06 9.00031e+07 9.20339e+06 23169 4.4424e+07 0 0.170469 0.992287 0.768299 8.93089e+07 0.00403495 1.9031e+07 1.78204e+07 1.94814e+07 287 1.94901e+07 7.73982e+06 0.00352313 1.92073e+07 49.6346 0.0297291 0.994718 0 50.5848 GTEX-12WSD-0011-R1b-SM-5LZVY C1, A1 7.2 Brain Brain - Hippocampus 0001954 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989468 459585 0.95794 0.990918 0.83932 22816 1 76 0.00274572 199 0 7.23086e+07 0.0418554 5.25507e+06 7.29714e+07 3.60013e+06 22831 3.59888e+07 0 0.11862 0.990918 0.831697 7.23086e+07 0.00346818 1.57297e+07 1.59763e+07 1.61176e+07 254 1.59738e+07 6.12098e+06 0.00310642 1.59713e+07 49.996 0.0720154 0.992367 0 50.6089 GTEX-12WSD-0011-R2a-SM-5LZWB C1, A1 5.8 Brain Brain - Substantia nigra 0002038 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991611 246431 0.972043 0.992987 0.857734 20163 1 76 0.002857 201 0 6.59439e+07 0.0278638 7.77373e+06 6.64096e+07 3.3173e+06 20172 3.28319e+07 0 0.11431 0.992987 0.851718 6.59439e+07 0.00361998 1.44839e+07 1.87653e+07 1.47787e+07 248 1.44411e+07 3.49199e+06 0.00323796 1.48902e+07 50.7655 0.117057 0.994363 0 50.5036 GTEX-12WSD-0011-R3b-SM-5LZWN C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991678 355698 0.965382 0.993216 0.843804 21817 1 76 0.00278249 196 0 6.76614e+07 0.0344483 5.98665e+06 6.81235e+07 3.3829e+06 21827 3.36866e+07 0 0.121578 0.993216 0.83808 6.76614e+07 0.00354367 1.47268e+07 1.78948e+07 1.50785e+07 241 1.48015e+07 4.65458e+06 0.00316249 1.50895e+07 50.4817 0.0878794 0.994754 0 50.59 GTEX-12WSD-0011-R4b-SM-5LZUA C1, A1 7.2 Brain Brain - Amygdala 0001876 423 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991862 398446 0.966209 0.993176 0.85082 23021 1 76 0.00270284 268 0 7.61014e+07 0.0335268 6.42659e+06 7.66243e+07 3.80887e+06 23035 3.78924e+07 0 0.115389 0.993176 0.845015 7.61014e+07 0.0034105 1.67016e+07 1.50913e+07 1.69911e+07 280 1.68575e+07 7.46064e+06 0.0030562 1.6926e+07 50.1014 0.0838714 0.994491 0 50.4296 GTEX-12WSD-0011-R5b-SM-5CVNG C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986176 452566 0.963639 0.990003 0.821691 23802 1 76 0.00520198 196 0 7.56736e+07 0.0361067 4.79489e+06 7.64378e+07 1.39302e+07 23821 3.75688e+07 0 0.141947 0.990003 0.813477 7.56736e+07 0.00733724 1.64878e+07 2.44137e+07 1.63797e+07 222 1.62547e+07 6.67734e+06 0.00626548 1.68515e+07 50.9014 0.0627293 0.993829 0 49.8356 GTEX-12WSD-0011-R6b-SM-5P9JU C1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99165 599280 0.958231 0.992192 0.816612 25449 1 76 0.00349258 273 0 1.12684e+08 0.0414301 4.15868e+06 1.13571e+08 3.74949e+06 25478 5.6143e+07 0 0.141619 0.992192 0.810236 1.12684e+08 0.00367628 2.45764e+07 2.47231e+07 2.47485e+07 310 2.46209e+07 1.28684e+07 0.00358438 2.47675e+07 50.1485 0.0366175 0.992734 0 50.1744 GTEX-12WSD-0011-R7b-SM-5PNWE C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 423 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992625 468996 0.961885 0.99438 0.829264 22493 1 76 0.00226126 198 0 6.92894e+07 0.0378553 4.11436e+06 6.9681e+07 6.45896e+06 22502 3.45128e+07 0 0.132621 0.99438 0.824604 6.92894e+07 0.00325047 1.50834e+07 2.20952e+07 1.5121e+07 236 1.49245e+07 6.81048e+06 0.00275499 1.5397e+07 50.7792 0.0590456 0.996135 0 50.0623 GTEX-12WSD-0011-R8b-SM-9QEGI C1, A1 5.6 Brain Brain - Hypothalamus 0001898 423 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 EXCLUDE 0.989428 196839 0.960668 0.992733 0.845158 21051 1 76 0.00236298 375 0 8.49092e+07 0.0391589 1.08213e+07 8.55307e+07 4.22334e+06 21062 4.2241e+07 0 0.115511 0.992733 0.839016 8.49092e+07 0.00454734 1.85031e+07 1.65655e+07 1.91645e+07 337 1.87137e+07 4.48239e+06 0.00345153 1.91596e+07 50.5887 0.12652 0.996039 0 50.8779 GTEX-12WSD-0011-R9a-SM-5GU6W C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 423 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.98821 578310 0.952271 0.99106 0.814164 22943 1 76 0.00216609 150 0 5.67064e+07 0.0474423 2.48395e+06 5.7218e+07 3.58982e+06 22958 2.81751e+07 0 0.138108 0.99106 0.806885 5.67064e+07 0.00314801 1.23878e+07 1.25504e+07 1.251e+07 158 1.23605e+07 6.78326e+06 0.00265564 1.27041e+07 50.6855 0.0434121 0.99391 0 50.2454 GTEX-12WSD-0126-SM-59HKN 0 C1 6 pieces, minimal dermal fat. Squamous epithelium is ~45-50 microns. 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 484 801 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.982404 253160 0.969847 0.987979 0.789037 24007 1 76 0.00273467 152 0 7.1863e+07 0.029915 451127 7.27374e+07 1.27636e+07 24027 3.564e+07 0 0.18081 0.987979 0.779552 7.1863e+07 0.00898575 1.56834e+07 9.25223e+06 1.57691e+07 156 1.58792e+07 1.11857e+07 0.00584257 1.59392e+07 50.0942 0.00620214 0.993554 0 50.1362 GTEX-12WSD-0226-SM-59HKO 0 C1 3 pieces; ~1--15% fibrofascial tissue or vascular elements, rep. delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 486 800 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981025 302057 0.971862 0.987353 0.785402 24482 1 76 0.00270123 174 0 8.30906e+07 0.0277765 321905 8.41549e+07 1.68472e+07 24513 4.1174e+07 0 0.18646 0.987353 0.77547 8.30906e+07 0.00884902 1.81124e+07 8.92035e+06 1.82292e+07 175 1.84146e+07 1.41835e+07 0.00575542 1.84152e+07 50.0009 0.00382515 0.993682 0 50.1608 GTEX-12WSD-0326-SM-59HKP 0 C1 2 pieces, no adherent fat; excellent specimens 6.4 Nerve Nerve - Tibial 0001323 491 795 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981275 286335 0.965419 0.987751 0.787133 24805 1 76 0.00270897 170 0 8.06703e+07 0.0343286 302263 8.16707e+07 1.63188e+07 24841 3.997e+07 0 0.178286 0.987751 0.777491 8.06703e+07 0.00906826 1.74703e+07 8.68074e+06 1.76711e+07 179 1.78228e+07 1.23426e+07 0.00586777 1.78049e+07 49.9748 0.003701 0.994227 0 50.2856 GTEX-12WSD-0526-SM-5EQ6F 0 C1 2 pieces, ~5-10% interstitial fat; rep foci delineated 8.5 Muscle Muscle - Skeletal 0011907 496 791 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992265 239161 0.983536 0.994435 0.866887 19417 1 76 0.00192781 128 0 6.45599e+07 0.0162417 903314 6.49212e+07 8.08797e+06 19426 3.21474e+07 0 0.11665 0.994435 0.862063 6.45599e+07 0.00281011 1.40856e+07 8.70229e+06 1.40913e+07 148 1.40616e+07 1.36379e+07 0.002368 1.42445e+07 50.3231 0.013914 0.996606 0 50.0102 GTEX-12WSD-0626-SM-5GCMW 0 C1 6 pieces, no dermalt fat; squamous epithelium is ~30-50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 501 786 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985763 183618 0.976313 0.990493 0.816031 23111 1 76 0.00227383 153 0 6.39142e+07 0.023386 279524 6.45277e+07 5.05763e+06 23128 3.17197e+07 0 0.160281 0.990493 0.808273 6.39142e+07 0.00364128 1.40082e+07 6.66342e+06 1.4075e+07 147 1.41507e+07 1.19148e+07 0.00295429 1.42203e+07 50.1226 0.00433185 0.995223 0 50.119 GTEX-12WSD-0826-SM-5GCNE 1 C1 2 pieces, minimal/mild congestion 6.1 Lung Lung 0008952 514 774 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984794 288886 0.965594 0.989449 0.716579 24759 1 76 0.00263736 120 0 6.39311e+07 0.0340104 124657 6.46129e+07 5.30936e+06 24788 3.17178e+07 0 0.249014 0.989449 0.709019 6.39311e+07 0.00389943 1.39231e+07 9.26533e+06 1.40597e+07 135 1.41334e+07 9.0874e+06 0.00326542 1.41346e+07 50.0023 0.00192929 0.994104 0 50.2441 GTEX-12WSD-0926-SM-5GCNL 1 C1 1 piece, no significant abnormalities 6.7 Thyroid Thyroid 0002046 515 774 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984984 239650 0.960728 0.989372 0.682042 24768 1 76 0.00240551 132 0 7.23697e+07 0.0389861 203517 7.31471e+07 6.02961e+06 24820 3.59196e+07 0 0.278686 0.989372 0.674793 7.23697e+07 0.0035716 1.56792e+07 8.12968e+06 1.57577e+07 144 1.58419e+07 9.96223e+06 0.00298597 1.58967e+07 50.0863 0.0027823 0.99376 0 50.1249 GTEX-12WSD-1026-SM-5EQ42 1 C1 2 pieces, fragmented, aderhent fat up to ~0.6mm on one. No signifianct atherosis noted 6.7 Blood Vessel Artery - Coronary 0001621 522 774 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988337 282138 0.967136 0.99083 0.754443 23230 1 76 0.00228727 143 0 7.66785e+07 0.032427 169803 7.73882e+07 9.17533e+06 23271 3.81177e+07 0 0.212693 0.99083 0.747525 7.66785e+07 0.00323193 1.62564e+07 6.84248e+06 1.64602e+07 162 1.64779e+07 1.32622e+07 0.00275841 1.64254e+07 49.9202 0.00219417 0.993323 0 50.3114 GTEX-12WSD-1126-SM-5EGJD 1 C1 2 pieces, minimal-mild interstitital fibrosis; occasional contraction band noted, rep encircled 7.6 Heart Heart - Left Ventricle 0006566 523 773 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989722 232931 0.980049 0.992786 0.819472 21349 1 76 0.00205069 197 0 7.99515e+07 0.019768 2.16425e+06 8.05325e+07 7.47712e+06 21366 3.97749e+07 0 0.160577 0.992786 0.81356 7.99515e+07 0.00305488 1.7719e+07 1.64625e+07 1.75916e+07 248 1.76296e+07 1.20671e+07 0.00255124 1.78904e+07 50.3671 0.0268743 0.99585 0 49.8197 GTEX-12WSD-1226-SM-5HL9Q 1 C1 2 pieces, no significant abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 524 773 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991398 196407 0.977846 0.993833 0.806275 21025 1 76 0.00219248 110 0 6.16385e+07 0.0218299 594880 6.20209e+07 5.56059e+06 21040 3.06838e+07 0 0.171572 0.993833 0.801302 6.16385e+07 0.00305681 1.27999e+07 5.95111e+06 1.27971e+07 137 1.28023e+07 1.10792e+07 0.00262358 1.29202e+07 50.2293 0.0095916 0.996268 0 49.9946 GTEX-12WSD-1326-SM-5GCNU 1 C1 6 pieces, mild-moderate atherosis up to ~0.3mm noted 6.4 Blood Vessel Artery - Aorta 0001496 525 772 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983459 225160 0.973534 0.98841 0.79806 21777 1 76 0.00227013 131 0 5.76812e+07 0.0260658 103059 5.83575e+07 4.98214e+06 21799 2.85839e+07 0 0.175473 0.98841 0.788811 5.76812e+07 0.00379498 1.23346e+07 4.8062e+06 1.24299e+07 136 1.24608e+07 1.04092e+07 0.00302874 1.25776e+07 50.2333 0.00176599 0.993362 0 50.1926 GTEX-12WSD-1426-SM-5GCN9 1 C1 2 pieces, no major abnormalities 6.9 Liver Liver 0001114 527 771 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984005 295468 0.975464 0.988729 0.805385 21763 1 76 0.00235326 154 0 7.54874e+07 0.0243523 953631 7.6348e+07 6.20515e+06 21779 3.74692e+07 0 0.170079 0.988729 0.796307 7.54874e+07 0.00354044 1.64271e+07 1.34057e+07 1.64562e+07 181 1.65372e+07 1.20577e+07 0.00294401 1.66706e+07 50.2008 0.0124906 0.993453 0 50.0443 GTEX-12WSD-1626-SM-5GCNR 1 C1 2 pieces, minimal fat. Islets stil visible; rep. delineated, but autolysis is approaching score '2' in some foci. 5.8 Pancreas Pancreas 0001150 530 774 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984955 157681 0.984307 0.989595 0.852581 19715 1 76 0.00244399 86 0 6.26534e+07 0.015337 146417 6.33121e+07 5.82465e+06 19724 3.11023e+07 0 0.131726 0.989595 0.84371 6.26534e+07 0.00366729 1.45338e+07 2.35092e+07 1.468e+07 101 1.4684e+07 2.03941e+07 0.00305277 1.48228e+07 50.2352 0.00231262 0.994235 0 50.2503 GTEX-12WSD-1726-SM-5GCN4 2 C1 2 pieces, moderate congestion 6 Spleen Spleen 0002106 532 772 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98214 271036 0.951231 0.987297 0.64797 24816 1 76 0.00275573 119 0 6.41434e+07 0.0484099 154452 6.49687e+07 5.08452e+06 24858 3.17872e+07 0 0.303261 0.987297 0.639739 6.41434e+07 0.00406328 1.38185e+07 1.01605e+07 1.38947e+07 125 1.39859e+07 8.35977e+06 0.00340609 1.40432e+07 50.1022 0.00237733 0.992454 0 50.1375 GTEX-12WSD-1826-SM-5GCOA 1 C1 6 pieces, squamous mucosa is ~0.3-0.6 mm, ~30-70% total thickness 7.8 Esophagus Esophagus - Mucosa 0006920 534 771 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982244 231185 0.975494 0.987281 0.756341 22938 1 76 0.00229342 138 0 7.57384e+07 0.0240558 232681 7.67142e+07 7.11288e+06 22965 3.75695e+07 0 0.219152 0.987281 0.746721 7.57384e+07 0.00349035 1.70636e+07 1.09904e+07 1.70795e+07 160 1.71966e+07 1.30752e+07 0.00288883 1.73201e+07 50.179 0.00303309 0.992317 0 50.0234 GTEX-12WSD-1926-SM-5GCOV 1 C1 6 pieces, all muscularis, good specimens 7.6 Esophagus Esophagus - Muscularis 0004648 535 772 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983424 322673 0.972942 0.988962 0.781367 22189 1 76 0.00231915 121 0 5.59013e+07 0.0267772 300995 5.65253e+07 4.77543e+06 22208 2.76997e+07 0 0.191575 0.988962 0.772743 5.59013e+07 0.0038056 1.19622e+07 4.46521e+06 1.19905e+07 127 1.20527e+07 9.30348e+06 0.00305821 1.21907e+07 50.2845 0.00532497 0.994501 0 50.059 GTEX-12WSD-2026-SM-5HL7D 1 C1 6 pieces, all muscularis, good specimens 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 536 771 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.980932 279417 0.969383 0.983885 0.757625 23479 1 76 0.00236019 160 0 7.60025e+07 0.0303176 401554 7.72473e+07 6.8127e+06 23504 3.77769e+07 0 0.211758 0.983885 0.745416 7.60025e+07 0.00339603 1.63151e+07 6.34196e+06 1.64938e+07 168 1.65085e+07 1.20472e+07 0.00287655 1.65133e+07 50.0072 0.00519829 0.986839 0 50.2723 GTEX-12WSD-2126-SM-5LZWK 1 C1 2 pieces, well preserved; abundant cortex and medulla visible in both sections (delineated)--valuable specimen 7.1 Adrenal Gland Adrenal Gland 0002369 538 769 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991711 275198 0.975113 0.993203 0.843308 21752 1 76 0.00255748 159 0 6.88372e+07 0.0245316 1.50694e+06 6.93083e+07 3.37083e+06 21769 3.42752e+07 0 0.131805 0.993203 0.837575 6.88372e+07 0.0032249 1.50542e+07 9.66336e+06 1.52662e+07 170 1.52773e+07 1.22111e+07 0.00289069 1.51418e+07 49.7772 0.0217425 0.994695 0 50.3495 GTEX-12WSD-2326-SM-59HKQ 1 C1 6 pieces; mucosa is ~1mm, ~40-60% total thickness and fairly well preserved 6.7 Stomach Stomach 0000945 541 767 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.979032 205488 0.980795 0.98539 0.8205 22973 1 76 0.00283735 224 0 7.29697e+07 0.0188202 886528 7.40516e+07 1.31426e+07 22988 3.61598e+07 0 0.160295 0.98539 0.808512 7.29697e+07 0.00924695 1.64518e+07 3.72404e+07 1.64843e+07 182 1.65637e+07 1.29726e+07 0.00602148 1.67894e+07 50.3383 0.0119718 0.991747 0 50.0493 GTEX-12WSD-2626-SM-5EGJE 1 C1 6 pieces, all muscularis, good specimens 7.2 Colon Colon - Sigmoid 0001159 548 763 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989696 258726 0.969075 0.992452 0.800921 23035 1 76 0.00202503 153 0 6.97651e+07 0.030682 490779 7.02957e+07 6.01455e+06 23057 3.46922e+07 0 0.168155 0.992452 0.794875 6.97651e+07 0.00315463 1.48527e+07 5.80734e+06 1.50311e+07 166 1.50158e+07 1.10883e+07 0.00258826 1.50473e+07 50.0524 0.00698164 0.995207 0 50.2986 GTEX-12WSD-2726-SM-59HLR 1 C1 2 pieces, typical post menopausal atrophy 7.1 Ovary Ovary 0000992 551 761 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980573 273035 0.965504 0.985967 0.707881 23824 1 76 0.00273719 142 0 7.94803e+07 0.0342535 193618 8.06116e+07 1.4116e+07 23868 3.94146e+07 0 0.257623 0.985967 0.697947 7.94803e+07 0.00862279 1.72728e+07 9.24853e+06 1.74774e+07 153 1.76042e+07 1.20329e+07 0.00566389 1.75471e+07 49.9188 0.00240186 0.991361 0 50.2943 GTEX-12WSD-2826-SM-59HKT 1 C1 2 pieces, all myometrium, no viable endometrium. Prominent vessels, suspect aliqouts from serosal surface 7 Uterus Uterus 0000995 553 760 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.979554 309665 0.963276 0.986314 0.685777 25054 1 76 0.00290183 169 0 9.39693e+07 0.0364288 188911 9.52733e+07 1.96346e+07 25110 4.65236e+07 0 0.277499 0.986314 0.676391 9.39693e+07 0.00897415 2.02734e+07 1.02073e+07 2.04649e+07 175 2.06862e+07 1.32679e+07 0.00591718 2.06477e+07 49.9535 0.00198283 0.993073 0 50.235 GTEX-12WSD-2926-SM-5LZUH 1 C1 6 pieces, all stroma, squamous mucosa completely sloughed/atrophic 7.1 Vagina Vagina 0000996 555 758 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991056 130536 0.971935 0.992024 0.755642 23526 1 76 0.00272139 143 0 7.40132e+07 0.0276841 148851 7.46083e+07 3.5757e+06 23557 3.68455e+07 0 0.216294 0.992024 0.749615 7.40132e+07 0.003317 1.61531e+07 6.43726e+06 1.6263e+07 157 1.62618e+07 1.26864e+07 0.0030189 1.62262e+07 49.9451 0.0019951 0.992992 0 50.1695 GTEX-12WSD-3026-SM-5LZU7 1 C1 4 pieces, no significant abnormalities 7 Brain Brain - Cerebellum 0002037 567 747 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.987737 421266 0.950879 0.989156 0.744011 24376 1 76 0.00282525 269 0 9.14744e+07 0.0487542 1.33218e+06 9.24772e+07 4.75202e+06 24410 4.55292e+07 0 0.206868 0.989156 0.735943 9.14744e+07 0.00347516 1.97904e+07 1.47603e+07 2.00382e+07 259 2.00484e+07 1.12038e+07 0.00314974 1.98984e+07 49.8122 0.0144055 0.990576 0 50.3111 GTEX-12WSD-3126-SM-5HL7P 1 C1 4 pieces, no abnormalities; fragment of dura/choroid plexus, delineated 5.8 Brain Brain - Cortex 0001870 570 744 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.99021 355638 0.961211 0.993099 0.82262 23180 1 76 0.00241048 197 0 6.93436e+07 0.0384804 3.30873e+06 6.98255e+07 6.29955e+06 23195 3.4497e+07 0 0.138591 0.993099 0.816943 6.93436e+07 0.00355154 1.50222e+07 1.90647e+07 1.53012e+07 221 1.51769e+07 6.96995e+06 0.00297935 1.53301e+07 50.2511 0.0473857 0.995988 0 50.46 GTEX-12WSD-3226-SM-5HL9G 1 C1 1 piece, mainly adenohypophysis; 5x2mm nubbin of neurohypophysis attached, delineated 6.8 Pituitary Pituitary 0000007 571 744 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988802 284705 0.953479 0.991914 0.711142 25145 1 76 0.00247603 131 0 6.75732e+07 0.046271 296845 6.8124e+07 6.71447e+06 25181 3.35995e+07 0 0.242337 0.991914 0.705392 6.75732e+07 0.00352 1.43804e+07 1.1753e+07 1.45393e+07 143 1.45858e+07 9.1106e+06 0.00299638 1.45285e+07 49.9015 0.00435742 0.995026 0 50.2747 GTEX-12WSE-0002-SM-5ANG8 C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSE-0002-SM-5DWRT C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSE-0002-SM-6WSCA C1 Blood Whole Blood 0013756 1348 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSE-0005-SM-5NQAE C1 8.1 Blood Whole Blood 0013756 1348 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.969183 300406 0.982006 0.971803 0.79261 19287 1 76 0.00266295 117 0 8.54108e+07 0.0159918 360821 8.7889e+07 1.26206e+07 19294 4.24286e+07 0 0.189397 0.971803 0.770261 8.54108e+07 0.0059568 2.00362e+07 1.29005e+08 2.03062e+07 139 2.02726e+07 2.25164e+07 0.00430544 2.03116e+07 50.0481 0.00410542 0.974423 0 50.3345 GTEX-12WSE-0008-SM-5YY9P C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1378 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992359 638783 0.973703 0.993676 0.853671 20748 1 76 0.00222813 289 0 1.09529e+08 0.025985 241173 1.10226e+08 4.80419e+06 20770 5.45755e+07 0 0.120031 0.993676 0.848272 1.09529e+08 0.00301841 2.45303e+07 2.06901e+07 2.46387e+07 275 2.46653e+07 2.85588e+07 0.00262275 2.46564e+07 49.9909 0.00218798 0.994993 0 50.1102 GTEX-12WSE-0011-R10a-SM-AHZMZ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1350 ChIP-Seq GTEX-12WSE-0011-R10b-SM-5P9JV C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993059 795385 0.957776 0.993384 0.84217 24506 1 76 0.00295663 272 0 1.14908e+08 0.0415249 3.07728e+06 1.15674e+08 3.61523e+06 24531 5.72386e+07 0 0.115606 0.993384 0.836598 1.14908e+08 0.00313482 2.51319e+07 2.23668e+07 2.51743e+07 317 2.51033e+07 1.66141e+07 0.0030457 2.52442e+07 50.14 0.0266032 0.993709 0 50.0422 GTEX-12WSE-0011-R10b-SM-CYKPY C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 RIP-Seq GTEX-12WSE-0011-R11b-SM-5P9JW C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991564 717259 0.943567 0.992013 0.727979 24352 1 76 0.00333489 271 0 1.13194e+08 0.0558502 1.19796e+06 1.14106e+08 3.6212e+06 24406 5.63689e+07 0 0.215588 0.992013 0.722165 1.13194e+08 0.00348649 2.44431e+07 2.03204e+07 2.44425e+07 273 2.44323e+07 1.53142e+07 0.00341066 2.45084e+07 50.0778 0.0104987 0.992461 0 49.9994 GTEX-12WSE-0011-R1b-SM-5GU4V C1, A1 7.7 Brain Brain - Hippocampus 0001954 1350 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990281 748016 0.9532 0.993148 0.843981 23061 1 76 0.00177513 269 0 7.33548e+07 0.0465229 3.95187e+06 7.38609e+07 4.78871e+06 23077 3.64537e+07 0 0.109219 0.993148 0.838198 7.33548e+07 0.00282795 1.59913e+07 1.74159e+07 1.60866e+07 265 1.59796e+07 7.37134e+06 0.00230002 1.63086e+07 50.5096 0.0535042 0.996016 0 50.1486 GTEX-12WSE-0011-R6b-SM-5LZV5 C1, A1 7.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1350 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99004 376815 0.960033 0.991657 0.835794 22827 1 76 0.00229316 266 0 7.26911e+07 0.0397837 6.35066e+06 7.33027e+07 3.57711e+06 22838 3.61919e+07 0 0.124239 0.991657 0.828821 7.26911e+07 0.00301857 1.56544e+07 1.75224e+07 1.62183e+07 286 1.61219e+07 5.58844e+06 0.00265527 1.58522e+07 49.5783 0.0866361 0.993274 0 50.8847 GTEX-12WSE-0011-R7a-SM-5PNWF C1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 1350 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.971722 507808 0.961178 0.974142 0.82357 18867 1 76 0.00234907 196 0 5.87547e+07 0.0387266 6.32031e+06 6.03143e+07 5.19681e+06 18871 2.91763e+07 0 0.137608 0.974142 0.802275 5.87547e+07 0.00368754 1.25441e+07 3.91853e+07 1.27445e+07 219 1.24724e+07 2.87661e+06 0.00301664 1.29606e+07 50.9597 0.10479 0.976563 0 50.3961 GTEX-12WSE-0526-SM-793B2 1 C1 6 pieces; small amount of subcutaneous fat and 10% intradermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1376 804 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992613 303916 0.977674 0.993609 0.795995 21777 1 76 0.00223724 161 0 6.10331e+07 0.0220392 222829 6.14257e+07 4.66477e+06 21807 3.03627e+07 0 0.181679 0.993609 0.790907 6.10331e+07 0.00286528 1.33561e+07 7.0212e+06 1.33056e+07 145 1.34143e+07 1.10419e+07 0.00255094 1.3309e+07 49.8029 0.00362762 0.994604 0 49.9052 GTEX-12WSE-0826-SM-5S2VL 2 C1 2 pieces; marked vascular congestion and hemorrhage 5.9 Lung Lung 0008952 1385 797 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.986541 319585 0.967173 0.989494 0.742206 24719 1 76 0.00234138 160 0 7.81732e+07 0.0324454 383560 7.90032e+07 7.78411e+06 24756 3.8825e+07 0 0.224967 0.989494 0.734409 7.81732e+07 0.00349314 1.72342e+07 1.74777e+07 1.73566e+07 179 1.73729e+07 1.15627e+07 0.00291554 1.74491e+07 50.1094 0.004855 0.992448 0 50.1769 GTEX-12WSE-0926-SM-5S2VX 0 C1 2 pieces; no fat 6.4 Heart Heart - Atrial Appendage 0006631 1387 796 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991468 265909 0.976243 0.994011 0.840224 22031 1 76 0.00180091 198 0 7.53131e+07 0.0235258 2.6723e+06 7.57668e+07 7.36212e+06 22054 3.74712e+07 0 0.136018 0.994011 0.835192 7.53131e+07 0.0031121 1.66166e+07 1.13931e+07 1.64727e+07 229 1.6436e+07 1.02043e+07 0.00245483 1.68305e+07 50.593 0.0352701 0.996555 0 49.7824 GTEX-12WSE-1126-SM-7DUEH 0 C1 2 pieces; excessive adherent fat (50% of specimen) 6.8 Blood Vessel Artery - Coronary 0001621 1394 790 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.987225 754786 0.944076 0.987704 0.792798 23492 1 76 0.0028246 169 0 7.84175e+07 0.0556145 516851 7.93936e+07 7.52855e+06 23517 3.90072e+07 0 0.151277 0.987704 0.78305 7.84175e+07 0.00433111 1.66366e+07 3.00329e+07 1.68031e+07 191 1.68358e+07 1.24036e+07 0.00357749 1.66652e+07 49.7454 0.00650998 0.988184 0 50.2489 GTEX-12WSE-1226-SM-73KUF 2 C1 2 pieces 6.4 Thyroid Thyroid 0002046 1400 784 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992003 253976 0.969578 0.99269 0.811262 25659 1 76 0.00416176 280 0 1.05975e+08 0.0299834 715718 1.06756e+08 4.96803e+06 25697 5.27821e+07 0 0.158316 0.99269 0.805332 1.05975e+08 0.00380605 2.32076e+07 1.36221e+07 2.33328e+07 282 2.33647e+07 1.95419e+07 0.00398403 2.32513e+07 49.8784 0.00670425 0.993377 0 50.1345 GTEX-12WSE-2926-SM-5RQJ9 1 C1 4 pieces; foci of adherent meninges annotated 6.6 Brain Brain - Cerebellum 0002037 1442 758 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990713 434870 0.944022 0.992228 0.741174 22884 1 76 0.00220357 149 0 7.06501e+07 0.0555821 924149 7.12035e+07 3.48611e+06 22911 3.51316e+07 0 0.202848 0.992228 0.735414 7.06501e+07 0.00309859 1.51617e+07 1.48314e+07 1.53419e+07 170 1.53541e+07 8.71477e+06 0.0026504 1.52573e+07 49.8418 0.012979 0.993744 0 50.2954 GTEX-12WSE-3126-SM-5YY9F 2 C1 1 piece; anterior 6.8 Pituitary Pituitary 0000007 1446 755 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989115 271834 0.9595 0.990901 0.775624 26023 1 76 0.00263813 273 0 9.4488e+07 0.0402088 1.44071e+06 9.53556e+07 4.52659e+06 26072 4.69944e+07 0 0.183876 0.990901 0.768567 9.4488e+07 0.00361665 2.04657e+07 9.71072e+06 2.06251e+07 274 2.06246e+07 1.32605e+07 0.00312651 2.06317e+07 50.0087 0.0151088 0.992687 0 50.1939 GTEX-12WSF-0002-SM-5DWRS C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSF-0002-SM-5IX76 C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4985 03/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSF-0002-SM-6WSCI C1 Blood Whole Blood 0013756 706 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSF-0005-SM-5NQAQ C1 8.2 Blood Whole Blood 0013756 706 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.963143 347862 0.980612 0.965936 0.794111 18610 1 76 0.00257746 122 0 9.57563e+07 0.0173209 256640 9.91331e+07 1.40702e+07 18616 4.75596e+07 0 0.186502 0.965936 0.76706 9.57563e+07 0.00568823 2.22649e+07 1.36948e+08 2.25472e+07 161 2.25108e+07 2.43698e+07 0.00412835 2.25896e+07 50.0874 0.00258884 0.968729 0 50.315 GTEX-12WSF-0008-SM-5YY8S C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 825 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992334 483358 0.975366 0.993795 0.842227 22205 1 76 0.0022674 293 0 1.21897e+08 0.0243221 622270 1.22658e+08 5.54981e+06 22236 6.07206e+07 0 0.133139 0.993795 0.837001 1.21897e+08 0.00284586 2.73273e+07 1.77377e+07 2.74422e+07 314 2.74527e+07 3.07634e+07 0.0025562 2.74976e+07 50.0408 0.00507322 0.995257 0 50.1049 GTEX-12WSF-0011-R10a-SM-5LZVH C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 766 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991633 525167 0.955912 0.993047 0.836288 22891 1 76 0.00238822 156 0 6.36218e+07 0.0436205 2.51585e+06 6.40673e+07 3.15307e+06 22903 3.16663e+07 0 0.119624 0.993047 0.830474 6.36218e+07 0.00311943 1.38634e+07 1.33787e+07 1.39844e+07 179 1.39702e+07 8.39332e+06 0.0027533 1.39688e+07 49.9974 0.0392689 0.994461 0 50.2174 GTEX-12WSF-0011-R10a-SM-AHZNQ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 766 ChIP-Seq GTEX-12WSF-0011-R11a-SM-5LZVT C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 766 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99014 498968 0.945147 0.991398 0.753533 22808 1 76 0.00262362 155 0 7.44761e+07 0.0545438 2.08569e+06 7.51223e+07 3.67188e+06 22833 3.70474e+07 0 0.191615 0.991398 0.74705 7.44761e+07 0.00332487 1.60269e+07 1.41011e+07 1.61934e+07 200 1.61773e+07 7.81028e+06 0.0029738 1.61304e+07 49.9275 0.0277639 0.992655 0 50.2585 GTEX-12WSF-0011-R1a-SM-5DUVI C1, A1 8.2 Brain Brain - Hippocampus 0001954 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989129 506606 0.961354 0.991861 0.846745 22578 1 76 0.00183865 203 0 6.74416e+07 0.0383174 4.72158e+06 6.7995e+07 5.62817e+06 22589 3.35491e+07 0 0.114609 0.991861 0.839854 6.74416e+07 0.00303367 1.49251e+07 1.57134e+07 1.48134e+07 232 1.47859e+07 7.71544e+06 0.00243451 1.51278e+07 50.5715 0.0694401 0.994594 0 49.8121 GTEX-12WSF-0011-R2a-SM-5DUVU C1, A1 5.9 Brain Brain - Substantia nigra 0002038 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987058 405145 0.970783 0.989933 0.829972 22710 1 76 0.00187276 276 0 8.17245e+07 0.0290268 8.71660e+06 8.25556e+07 7.3837e+06 22723 4.06615e+07 0 0.140812 0.989933 0.821616 8.17245e+07 0.00298959 1.79163e+07 3.41863e+07 1.78398e+07 288 1.76304e+07 7.77112e+06 0.00242955 1.83336e+07 50.9776 0.105585 0.992807 0 49.8931 GTEX-12WSF-0011-R3a-SM-5DUW7 C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 766 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98825 491268 0.964577 0.990915 0.846014 22690 1 76 0.00184683 198 0 6.92866e+07 0.0350574 5.70122e+06 6.99218e+07 6.18537e+06 22703 3.44691e+07 0 0.118563 0.990915 0.838329 6.92866e+07 0.0031621 1.52525e+07 2.15223e+07 1.522e+07 248 1.51325e+07 7.65592e+06 0.0025027 1.55131e+07 50.6209 0.081537 0.99358 0 49.9466 GTEX-12WSF-0011-R4b-SM-5HL88 C1, A1 7.3 Brain Brain - Amygdala 0001876 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987893 568565 0.961322 0.991851 0.844265 22556 1 76 0.0020194 199 0 6.72156e+07 0.0384761 5.18811e+06 6.77678e+07 5.52837e+06 22568 3.33916e+07 0 0.117056 0.991851 0.837386 6.72156e+07 0.0033733 1.47496e+07 1.8218e+07 1.47584e+07 234 1.45966e+07 6.06844e+06 0.00269365 1.51611e+07 50.9485 0.0765571 0.99581 0 50.015 GTEX-12WSF-0011-R5a-SM-5HL8K C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989877 549068 0.957499 0.993111 0.834455 23266 1 76 0.00194602 153 0 6.30047e+07 0.0422517 4.28233e+06 6.34418e+07 5.54759e+06 23282 3.13299e+07 0 0.123044 0.993111 0.828706 6.30047e+07 0.00325561 1.37935e+07 1.45776e+07 1.38446e+07 195 1.37688e+07 6.63577e+06 0.00259868 1.40673e+07 50.5362 0.0675002 0.996345 0 50.0925 GTEX-12WSF-0011-R6b-SM-5HL8W C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989374 552277 0.958996 0.992215 0.843337 22935 1 76 0.00206742 268 0 7.12612e+07 0.0407768 5.96515e+06 7.18203e+07 6.3166e+06 22946 3.54576e+07 0 0.115659 0.992215 0.836772 7.12612e+07 0.00309103 1.54822e+07 2.00145e+07 1.56517e+07 264 1.55628e+07 7.31086e+06 0.00257776 1.57501e+07 50.2991 0.0830566 0.995057 0 50.2723 GTEX-12WSF-0011-R7b-SM-5HL99 C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 766 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988851 638999 0.956968 0.992297 0.834855 22912 1 76 0.00210038 267 0 7.65098e+07 0.0428648 6.94705e+06 7.71038e+07 6.8618e+06 22922 3.80413e+07 0 0.122112 0.992297 0.828424 7.65098e+07 0.00334116 1.65141e+07 2.5559e+07 1.69469e+07 299 1.68066e+07 6.26904e+06 0.00271861 1.68878e+07 50.1205 0.0901 0.995743 0 50.6468 GTEX-12WSF-0426-SM-7KUMT 0 C1 2 pieces, rim of adherent fat up to ~1mm discontinuous around both setions 7.3 Nerve Nerve - Tibial 0001323 845 687 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991132 420514 0.969867 0.992964 0.770825 25276 1 76 0.00335817 302 0 1.11006e+08 0.029813 493075 1.11792e+08 7.93805e+06 25322 5.52307e+07 0 0.199042 0.992964 0.765402 1.11006e+08 0.0045388 2.44262e+07 1.07263e+07 2.45263e+07 329 2.45889e+07 1.82498e+07 0.0039474 2.45606e+07 49.9712 0.00441063 0.994797 0 50.1022 GTEX-12WSF-0926-SM-6PALU 1 C1 2 pieces, <5% interstitial fat 7.7 Muscle Muscle - Skeletal 0011907 857 678 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982736 156220 0.985575 0.989808 0.898935 20135 1 76 0.00297348 201 0 9.40206e+07 0.0140912 2.26005e+06 9.49887e+07 1.08703e+07 20144 4.65912e+07 0 0.0866407 0.989808 0.889773 9.40206e+07 0.00549896 2.05799e+07 9.34621e+06 2.05005e+07 241 2.07687e+07 2.06674e+07 0.0042272 2.09527e+07 50.2204 0.0237929 0.996881 0 49.9033 GTEX-12WSF-1526-SM-6PAN6 1 C1 2 pieces, mld mesothelial hyperplasia/fibrosis, rep focus delineated 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 872 666 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982434 221149 0.975115 0.988972 0.790497 24572 1 76 0.00322716 277 0 1.1092e+08 0.0245691 677960 1.12157e+08 1.16002e+07 24608 5.49683e+07 0 0.184619 0.988972 0.781779 1.1092e+08 0.00532163 2.43297e+07 1.04558e+07 2.43702e+07 316 2.46454e+07 1.92756e+07 0.00426748 2.47545e+07 50.1104 0.00604473 0.995509 0 50.0416 GTEX-12WSF-1626-SM-7KUG5 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~60microns. One section mis-embedded (squamous epithelium not visible) 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 874 664 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985804 240940 0.97356 0.990475 0.77663 23761 1 76 0.0032195 145 0 6.85629e+07 0.0262246 614544 6.92223e+07 6.3729e+06 23781 3.40209e+07 0 0.19693 0.990475 0.769232 6.85629e+07 0.00359248 1.51155e+07 8.60359e+06 1.52998e+07 152 1.54211e+07 1.09207e+07 0.00340511 1.52989e+07 49.801 0.00887784 0.995147 0 50.303 GTEX-12WSF-3026-SM-6LPIU 1 C1 1 piece, pituitary, ~50% adenohypophysis, ~50% neurohypophysis (delineated) 7.1 Pituitary Pituitary 0000007 952 594 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992245 280265 0.96014 0.994414 0.817043 23089 1 76 0.00253584 125 0 6.12889e+07 0.0395487 496696 6.16333e+07 9.50229e+06 23106 3.05191e+07 0 0.143097 0.994414 0.812478 6.12889e+07 0.00352643 1.29812e+07 1.69826e+07 1.30576e+07 137 1.30618e+07 1.15222e+07 0.00303005 1.31072e+07 50.0867 0.00805889 0.996582 0 50.1466 GTEX-12WSF-3126-SM-6M478 1 C1 4 pieces, cerebral cortex, no abnormalities 7.1 Brain Brain - Cortex 0001870 952 595 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994563 320383 0.961325 0.995972 0.83829 22868 1 76 0.00237304 197 0 7.09198e+07 0.0383368 3.07128e+06 7.12066e+07 1.01781e+07 22882 3.53557e+07 0 0.123035 0.995972 0.834913 7.09198e+07 0.00331087 1.5532e+07 1.64544e+07 1.56682e+07 234 1.55942e+07 8.41147e+06 0.00284129 1.5697e+07 50.1643 0.0431319 0.997381 0 50.2182 GTEX-12WSF-3126-SM-CYKSU 1 C1 4 pieces, cerebral cortex, no abnormalities 7.1 Brain Brain - Cortex 0001870 952 595 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 RIP-Seq GTEX-12WSG-0001-SM-5ANGG B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSG-0001-SM-5DWRF B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSG-0001-SM-7DRPL B1 Blood Whole Blood 0013756 236 BP-41501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSG-0005-SM-5NQA2 B1 8.1 Blood Whole Blood 0013756 236 BP-41459 RNA isolation_PAXgene Blood RNA (Manual) 07/29/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.964683 1.12803e+06 0.951951 0.967311 0.769371 19457 1 76 0.00244787 146 0 9.90077e+07 0.0466431 246057 1.02354e+08 1.44002e+07 19472 4.92102e+07 0 0.182579 0.967311 0.744222 9.90077e+07 0.00562791 2.21442e+07 1.4774e+08 2.26456e+07 166 2.26343e+07 2.36e+07 0.00403357 2.2434e+07 49.7779 0.00240399 0.969939 0 50.5598 GTEX-12WSG-0008-SM-5TDC4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 426 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.99064 385025 0.977561 0.993509 0.85149 21925 1 76 0.0019367 225 0 9.6657e+07 0.0220993 443265 9.72885e+07 1.19023e+07 21951 4.80873e+07 0 0.126072 0.993509 0.845963 9.6657e+07 0.00351471 2.15581e+07 1.22188e+07 2.16351e+07 253 2.16673e+07 2.35601e+07 0.00272342 2.18054e+07 50.1589 0.00455619 0.996379 0 50.0891 GTEX-12WSG-0226-SM-5EGIF 2 B1 4 pieces, one is skeletal muscle, one is 30% vessels/fibrofatty tissue, patchy chronic inflammation and fibrosis 6.2 Thyroid Thyroid 0002046 331 1300 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979009 185200 0.962037 0.984815 0.726342 24445 1 76 0.00321149 103 0 5.84382e+07 0.0357197 130556 5.93392e+07 9.95604e+06 24477 2.89019e+07 0 0.235696 0.984815 0.715313 5.84382e+07 0.00651449 1.27673e+07 9.13317e+06 1.28392e+07 119 1.29717e+07 8.4712e+06 0.00485325 1.2958e+07 49.9735 0.00220016 0.990621 0 50.1402 GTEX-12WSG-0326-SM-5FQU3 1 B1 2 pieces, some congestion and emphysematous change and fibrosis 7.7 Lung Lung 0008952 335 1296 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.989937 250938 0.973206 0.992589 0.766589 23620 1 76 0.00245969 135 0 6.94764e+07 0.026384 133431 6.99951e+07 9.50159e+06 23654 3.45563e+07 0 0.206617 0.992589 0.760908 6.94764e+07 0.00363561 1.53431e+07 6.61e+06 1.543e+07 148 1.54676e+07 1.19021e+07 0.00304608 1.54799e+07 50.0198 0.00190629 0.995242 0 50.1412 GTEX-12WSG-0426-SM-5FQSE 0 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 333 1298 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988984 306801 0.97217 0.992396 0.788288 23716 1 76 0.00228958 152 0 7.30939e+07 0.0275333 253251 7.36539e+07 1.00532e+07 23749 3.63177e+07 0 0.183882 0.992396 0.782294 7.30939e+07 0.00396606 1.59609e+07 7.70863e+06 1.60441e+07 171 1.60551e+07 1.17394e+07 0.00312494 1.61885e+07 50.2068 0.00343839 0.995808 0 50.13 GTEX-12WSG-0526-SM-5FQTH 1 B1 2 pieces 7.2 Heart Heart - Left Ventricle 0006566 337 1294 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98847 242304 0.981207 0.992324 0.836617 21423 1 76 0.00218389 196 0 7.7964e+07 0.0186176 5.12612e+06 7.85671e+07 1.26024e+07 21439 3.87629e+07 0 0.14459 0.992324 0.830195 7.7964e+07 0.00353731 1.74387e+07 1.36687e+07 1.73122e+07 250 1.73679e+07 1.2137e+07 0.00285797 1.76411e+07 50.3902 0.065245 0.996178 0 49.8181 GTEX-12WSG-0626-SM-5FQTQ 1 B1 2 pieces, mild steatosis and passive congestion 6.6 Liver Liver 0001114 338 1293 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.98895 259314 0.978636 0.991927 0.826828 21818 1 76 0.00245301 157 0 7.83315e+07 0.0210958 518153 7.89689e+07 1.14465e+07 21841 3.89645e+07 0 0.151808 0.991927 0.820153 7.83315e+07 0.00361223 1.71942e+07 1.12812e+07 1.7285e+07 201 1.73159e+07 1.44627e+07 0.00303088 1.73842e+07 50.0984 0.00656148 0.994905 0 50.1318 GTEX-12WSG-0726-SM-5EGIG 2 B1 2 pieces 6.8 Adrenal Gland Adrenal Gland 0002369 339 1292 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.987124 283236 0.96317 0.990827 0.76064 24188 1 76 0.00239495 159 0 7.34302e+07 0.0366445 1.92871e+06 7.411e+07 9.48642e+06 24225 3.6485e+07 0 0.20253 0.990827 0.753663 7.34302e+07 0.00453916 1.59028e+07 8.98413e+06 1.6057e+07 180 1.60793e+07 9.33296e+06 0.00346305 1.61372e+07 50.0899 0.026025 0.99453 0 50.2412 GTEX-12WSG-0826-SM-5EQ5A 2 B1 6 pieces, glomeruli in all sections, rare sclerotic glomerulus, focal vascular hyalinization/thickening 7.3 Kidney Kidney - Cortex 0001225 341 1290 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992179 222298 0.973074 0.994384 0.805953 22474 1 76 0.0020082 123 0 6.06709e+07 0.0267419 1.93834e+06 6.10136e+07 7.83108e+06 22491 3.0205e+07 0 0.167121 0.994384 0.801427 6.06709e+07 0.00291758 1.34818e+07 1.24301e+07 1.33299e+07 162 1.33218e+07 7.66474e+06 0.00246188 1.36125e+07 50.5397 0.031769 0.99659 0 49.7167 GTEX-12WSG-0926-SM-5EGIH 1 B1 2 pieces, congested 6.1 Spleen Spleen 0002106 345 1286 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982013 248956 0.95706 0.98698 0.725141 24327 1 76 0.00316305 117 0 6.14896e+07 0.0410618 161498 6.23007e+07 9.44708e+06 24356 3.04452e+07 0 0.23192 0.98698 0.715699 6.14896e+07 0.00640412 1.33502e+07 1.1436e+07 1.35008e+07 127 1.36094e+07 8.70283e+06 0.00477543 1.35365e+07 49.8657 0.00259223 0.991947 0 50.2804 GTEX-12WSG-1026-SM-5EGII 2 B1 2 pieces 7.1 Pancreas Pancreas 0001150 346 1285 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984424 242906 0.980482 0.989446 0.855752 20464 1 76 0.00246622 93 0 7.80353e+07 0.0188122 89016 7.88677e+07 1.30922e+07 20480 3.8719e+07 0 0.124729 0.989446 0.84672 7.80353e+07 0.00569003 1.8049e+07 3.51136e+07 1.82468e+07 111 1.82903e+07 2.54173e+07 0.00406994 1.84038e+07 50.1546 0.00112867 0.994468 0 50.2724 GTEX-12WSG-1226-SM-5EQ4C 0 B1 2 pieces, <10% fat 7.6 Heart Heart - Atrial Appendage 0006631 349 1282 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991027 229186 0.977905 0.993588 0.823819 21653 1 76 0.00181943 195 0 7.83386e+07 0.0218154 2.46057e+06 7.88442e+07 1.03163e+07 21671 3.89897e+07 0 0.154086 0.993588 0.818537 7.83386e+07 0.00274489 1.69438e+07 1.34879e+07 1.68423e+07 246 1.68485e+07 1.26767e+07 0.00228097 1.71182e+07 50.3971 0.031208 0.996149 0 49.8498 GTEX-12WSG-1426-SM-5FQUK 0 B1 2 pieces, several corpora albicantia 6.6 Ovary Ovary 0000992 355 1276 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.988504 269382 0.971196 0.99183 0.713866 23015 1 76 0.00233573 142 0 8.05422e+07 0.0284878 167841 8.12056e+07 1.12805e+07 23062 4.00334e+07 0 0.25733 0.99183 0.708034 8.05422e+07 0.00363329 1.77956e+07 9.49677e+06 1.79536e+07 163 1.80165e+07 1.32805e+07 0.00298233 1.79897e+07 49.9628 0.00206686 0.995156 0 50.2209 GTEX-12WSG-2026-SM-5FQUU 2 B1 6 pieces, moderately autolyzed mucosa 6.1 Stomach Stomach 0000945 381 1250 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.959237 205585 0.984255 0.962629 0.86967 21137 1 76 0.00225644 371 0 7.48499e+07 0.0149696 407980 7.77557e+07 1.14908e+07 21151 3.71801e+07 0 0.114585 0.962629 0.837169 7.48499e+07 0.00395905 1.75408e+07 1.44986e+08 1.79035e+07 248 1.79553e+07 2.48458e+07 0.00310475 1.77474e+07 49.7088 0.00524694 0.96602 0 50.5117 GTEX-12WSG-2126-SM-5EGJ7 0 B1 2 pieces, predominantly myometrium with strips of endometrial glands, focal adenomyosis, microscopic leiomyoma 7.7 Uterus Uterus 0000995 382 1249 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989873 328160 0.965686 0.992616 0.739508 24297 1 76 0.00196248 213 0 9.15539e+07 0.0340159 204735 9.2235e+07 7.76164e+06 24344 4.55296e+07 0 0.226178 0.992616 0.734048 9.15539e+07 0.00285566 1.98038e+07 8.41055e+06 2.00181e+07 231 2.00593e+07 1.53663e+07 0.00240784 2.00003e+07 49.9263 0.00221971 0.995358 0 50.2691 GTEX-12WSG-2426-SM-5EQLZ 2 B1 6 pieces, well trimmed, small focus of autolyzed mucosa 6.5 Colon Colon - Sigmoid 0001159 388 1243 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.991044 250690 0.968533 0.993399 0.804386 23572 1 76 0.00204035 278 0 8.9062e+07 0.0311911 347714 8.96538e+07 1.28422e+07 23601 4.43249e+07 0 0.164147 0.993399 0.799076 8.9062e+07 0.00293516 1.90246e+07 8.59522e+06 1.91346e+07 264 1.91286e+07 1.5111e+07 0.00248669 1.92304e+07 50.1326 0.00387841 0.995754 0 50.1442 GTEX-12WSG-2526-SM-5EQ4O 1 B1 2 pieces, 5-10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 419 1212 BP-44399 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2013 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.992325 215807 0.98314 0.994459 0.864442 19459 1 76 0.00168843 200 0 7.39048e+07 0.0165978 848440 7.43165e+07 9.28991e+06 19464 3.68057e+07 0 0.118698 0.994459 0.859653 7.39048e+07 0.00256411 1.59013e+07 1.43272e+07 1.5794e+07 215 1.58199e+07 1.42203e+07 0.00212533 1.60236e+07 50.3198 0.0114166 0.996593 0 49.8308 GTEX-12WSG-2726-SM-5EQ5M 1 B1 4 pieces, each includes ~30% attached and internal fat 7.9 Nerve Nerve - Tibial 0001323 427 1204 BP-45028 RNA Extraction from Paxgene-derived Lysate Plate Based 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989287 295597 0.966336 0.992382 0.740623 23352 1 76 0.00208575 142 0 6.32024e+07 0.0333541 172474 6.36875e+07 7.59485e+06 23385 3.1411e+07 0 0.225714 0.992382 0.734981 6.32024e+07 0.003264 1.38485e+07 5.67925e+06 1.39927e+07 142 1.40203e+07 9.75962e+06 0.00267304 1.40076e+07 49.9773 0.00270813 0.995477 0 50.259 GTEX-12WSG-2826-SM-5FQUS 1 B1 6 pieces, well trimmed, but include up to 20% internal fat, squamous epithelium measures ~35 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 427 1204 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4793 02/19/2014 TruSeq.v1 EXCLUDE 0.990269 196541 0.975991 0.992997 0.804429 22006 1 76 0.00223945 194 0 7.04328e+07 0.0237089 302318 7.09295e+07 9.83096e+06 22028 3.50459e+07 0 0.171561 0.992997 0.798796 7.04328e+07 0.00354108 1.52777e+07 8.22916e+06 1.53158e+07 164 1.53639e+07 1.26696e+07 0.00288848 1.54104e+07 50.0756 0.00426223 0.995725 0 50.0622 GTEX-12WSG-2826-SM-E9J4H 1 B1 6 pieces, well trimmed, but include up to 20% internal fat, squamous epithelium measures ~35 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 427 1204 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985438 468648 0.973873 0.986527 0.7835 23219 1 76 0.00189965 194 0 7.99466e+07 0.0259094 423507 8.10385e+07 4.07673e+06 23243 3.98162e+07 0 0.190373 0.986527 0.772943 7.99466e+07 0.00287009 1.74901e+07 7.35843e+06 1.76211e+07 196 1.75695e+07 1.30295e+07 0.00238433 1.76295e+07 50.0852 0.005226 0.987615 0 50.1864 GTEX-12WSG-5001-SM-AN3X9 B1 Heart Heart - Left Ventricle 0006566 337 ChIP-Seq GTEX-12WSG-5004-SM-7EPG9 B1 6.8 Lung Lung 0008952 334 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991287 323558 0.972014 0.993486 0.819622 24370 1 76 0.00330586 154 0 9.74672e+07 0.0274616 188933 9.81063e+07 1.24347e+07 24400 4.85496e+07 0 0.152392 0.993486 0.814284 9.74672e+07 0.0116686 2.14501e+07 1.35615e+07 2.16614e+07 167 2.17193e+07 1.83208e+07 0.00747799 2.15945e+07 49.856 0.0019258 0.995686 0 50.245 GTEX-12WSG-5005-SM-AN3XB B1 Lung Lung 0008952 334 ChIP-Seq GTEX-12WSG-5007-SM-7DUGZ B1 7.5 Esophagus Esophagus - Mucosa 0006920 359 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993098 544316 0.969749 0.993977 0.833954 24523 1 76 0.00266976 301 0 1.00699e+08 0.0300132 392328 1.0131e+08 8.73342e+06 24546 5.01735e+07 0 0.135795 0.993977 0.828931 1.00699e+08 0.00396939 2.25437e+07 3.79201e+07 2.28125e+07 268 2.28815e+07 2.33967e+07 0.003319 2.25757e+07 49.6636 0.00387257 0.994855 0 50.2963 GTEX-12WSG-5016-SM-7SB84 B1 6.1 Muscle Muscle - Skeletal 0011907 421 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.9909 707932 0.9529 0.99344 0.824028 20481 1 76 0.00233582 161 0 7.8409e+07 0.0469049 912057 7.89267e+07 9.11107e+06 20492 3.90242e+07 0 0.128872 0.99344 0.818622 7.8409e+07 0.00369206 1.65792e+07 2.6492e+07 1.69479e+07 186 1.69416e+07 1.44485e+07 0.00301221 1.67708e+07 49.7467 0.0115557 0.995981 0 50.5499 GTEX-12WSG-5016-SM-AN3XC B1 Muscle Muscle - Skeletal 0011907 421 ChIP-Seq GTEX-12WSH-0001-SM-5ANG1 B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSH-0001-SM-5DWRM B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSH-0001-SM-6WSBP B1 Blood Whole Blood 0013756 740 BP-41965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSH-0005-SM-5NQ9P B1 8.2 Blood Whole Blood 0013756 740 BP-41899 RNA isolation_PAXgene Blood RNA (Manual) 08/05/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.983667 674342 0.961875 0.986674 0.707224 20150 1 76 0.00303562 138 0 8.65352e+07 0.0373762 303222 8.77039e+07 1.1163e+07 20173 4.29908e+07 0 0.254652 0.986674 0.697799 8.65352e+07 0.00598017 1.91803e+07 6.5391e+07 1.93023e+07 156 1.93861e+07 1.45205e+07 0.00450341 1.93612e+07 49.9679 0.00345734 0.989681 0 50.1585 GTEX-12WSH-0008-SM-5S2V1 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1007 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.99343 421994 0.969339 0.994951 0.842049 21579 1 76 0.0016817 280 0 8.86761e+07 0.0303846 343237 8.9126e+07 9.14333e+06 21600 4.41916e+07 0 0.12729 0.994951 0.837798 8.86761e+07 0.00250866 1.94966e+07 1.5529e+07 1.96653e+07 259 1.96258e+07 1.88556e+07 0.00209455 1.96728e+07 50.0598 0.00385114 0.996472 0 50.2154 GTEX-12WSH-0011-R10a-SM-5LZUS B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991393 479689 0.957682 0.992423 0.83978 22790 1 76 0.00241464 197 0 6.79583e+07 0.0420389 4.6158e+06 6.84772e+07 3.38629e+06 22804 3.38035e+07 0 0.117902 0.992423 0.833418 6.79583e+07 0.00315199 1.48516e+07 1.18181e+07 1.49601e+07 216 1.48868e+07 6.94938e+06 0.00278293 1.50007e+07 50.1905 0.0674064 0.993454 0 50.1819 GTEX-12WSH-0011-R10a-SM-AHZ6J B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 795 ChIP-Seq GTEX-12WSH-0011-R10a-SM-CYKRI B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 RIP-Seq GTEX-12WSH-0011-R11a-SM-5LZVM B1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990356 349162 0.948308 0.991558 0.773198 21924 1 76 0.00258122 151 0 6.54836e+07 0.0514247 1.79232e+06 6.60411e+07 3.41248e+06 21941 3.25694e+07 0 0.17511 0.991558 0.766671 6.54836e+07 0.00328283 1.41587e+07 9.93763e+06 1.42771e+07 176 1.42625e+07 6.80127e+06 0.0029316 1.42491e+07 49.9764 0.0271395 0.992759 0 50.2083 GTEX-12WSH-0011-R1a-SM-5GU5V B1, A1 6 Brain Brain - Hippocampus 0001954 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.991632 583760 0.956004 0.993855 0.861827 21929 1 76 0.00178652 206 0 6.76999e+07 0.0437564 6.36169e+06 6.81185e+07 4.26464e+06 21937 3.36864e+07 0 0.0941762 0.993855 0.856531 6.76999e+07 0.00260726 1.48782e+07 1.7703e+07 1.50144e+07 244 1.48104e+07 7.11277e+06 0.00219597 1.52304e+07 50.6991 0.0933916 0.996077 0 50.2279 GTEX-12WSH-0011-R2a-SM-5GU68 B1, A1 6 Brain Brain - Substantia nigra 0002038 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990663 462798 0.963581 0.993581 0.863614 20902 1 76 0.00182503 210 0 6.4464e+07 0.0362073 8.02470e+06 6.48804e+07 4.19625e+06 20908 3.2051e+07 0 0.0999661 0.993581 0.858071 6.4464e+07 0.00276352 1.4261e+07 1.64942e+07 1.44486e+07 219 1.41846e+07 6.57889e+06 0.0022929 1.47072e+07 50.9045 0.123685 0.9965 0 50.3266 GTEX-12WSH-0011-R4a-SM-5GU6K B1, A1 6 Brain Brain - Amygdala 0001876 795 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.971122 708264 0.948368 0.973236 0.860217 21372 1 76 0.00230975 207 0 6.57519e+07 0.0513301 6.34689e+06 6.75601e+07 4.15664e+06 21387 3.26698e+07 0 0.0881505 0.973236 0.837194 6.57519e+07 0.00307706 1.43387e+07 2.25147e+07 1.44515e+07 215 1.42745e+07 7.58969e+06 0.00269257 1.46647e+07 50.6742 0.0939443 0.97535 0 50.1959 GTEX-12WSH-0011-R5b-SM-5P9F3 B1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 795 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99001 666004 0.96485 0.990305 0.834233 22910 1 76 0.0027937 371 0 1.20314e+08 0.035012 2.09865e+07 1.21492e+08 3.73248e+06 22922 5.99155e+07 0 0.130616 0.990305 0.826146 1.20314e+08 0.00345173 2.57746e+07 5.73081e+07 2.67232e+07 383 2.60058e+07 8.16322e+06 0.00312262 2.65218e+07 50.4911 0.17274 0.990601 0 50.9035 GTEX-12WSH-0011-R6b-SM-5P9F4 B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 795 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991998 914946 0.954008 0.992288 0.821421 24381 1 76 0.00287358 375 0 1.25978e+08 0.0457848 1.39439e+07 1.26957e+08 4.30823e+06 24398 6.2744e+07 0 0.132586 0.992288 0.815086 1.25978e+08 0.00342287 2.6845e+07 4.71648e+07 2.75848e+07 348 2.71746e+07 1.18419e+07 0.00314815 2.73022e+07 50.1171 0.109831 0.992578 0 50.6795 GTEX-12WSH-0011-R9b-SM-5LZUG B1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 795 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991149 423804 0.955407 0.992311 0.811574 22698 1 76 0.00236027 218 0 7.07438e+07 0.0443159 3.38242e+06 7.1292e+07 3.40126e+06 22717 3.52063e+07 0 0.143833 0.992311 0.805334 7.07438e+07 0.00312048 1.56514e+07 1.22949e+07 1.59125e+07 203 1.57743e+07 9.21422e+06 0.00273993 1.58734e+07 50.1565 0.0474446 0.993472 0 50.4136 GTEX-12WSH-0126-SM-5GCO3 1 B1 2 pieces; patchy edema and hemorrhage 7.2 Lung Lung 0008952 875 1338 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984265 166763 0.978891 0.989054 0.738482 22112 1 76 0.00252138 110 0 5.60038e+07 0.0206869 382643 5.66236e+07 4.68671e+06 22146 2.77835e+07 0 0.240409 0.989054 0.730399 5.60038e+07 0.00374615 1.23375e+07 5.14538e+06 1.24279e+07 118 1.25032e+07 9.26527e+06 0.0031308 1.25191e+07 50.0318 0.00675766 0.993843 0 50.1826 GTEX-12WSH-0226-SM-5GCOG 2 B1 2 pieces 6 Thyroid Thyroid 0002046 884 1329 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.980585 173440 0.971329 0.986092 0.800721 23880 1 76 0.00219686 149 0 6.96603e+07 0.0284017 496849 7.06428e+07 5.93732e+06 23903 3.45127e+07 0 0.170608 0.986092 0.789584 6.96603e+07 0.003564 1.52078e+07 7.35392e+06 1.5324e+07 162 1.53929e+07 1.22613e+07 0.00287661 1.55133e+07 50.1947 0.00703325 0.991598 0 50.1902 GTEX-12WSH-0326-SM-5GCNH 1 B1 2 pieces; spermatogenesis present 5.8 Testis Testis 0000473 881 1332 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984567 259343 0.923374 0.988888 0.715441 32128 1 76 0.00220562 142 0 6.81275e+07 0.0762853 790673 6.88931e+07 5.80638e+06 32179 3.38362e+07 0 0.207934 0.988888 0.70749 6.81275e+07 0.00328334 1.39564e+07 1.01577e+07 1.39259e+07 139 1.40314e+07 1.08147e+07 0.00274213 1.41119e+07 50.143 0.0114768 0.993208 0 49.9453 GTEX-12WSH-1526-SM-5BC5W 1 B1 6 pieces; hair-bearing; 10% internal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 917 1296 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.983365 388691 0.96972 0.989309 0.783342 23776 1 76 0.00276708 176 0 7.64055e+07 0.0300844 739178 7.72311e+07 2.37443e+07 23801 3.78623e+07 0 0.186378 0.989309 0.774968 7.64055e+07 0.00562532 1.6671e+07 1.14096e+07 1.68645e+07 179 1.69469e+07 1.16457e+07 0.00418761 1.70254e+07 50.1156 0.00957098 0.995253 0 50.2885 GTEX-12WSH-2526-SM-5CVNH 0 B1 2 pieces; 20% internal and external fat 7.8 Muscle Muscle - Skeletal 0011907 1009 1204 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987012 191168 0.983668 0.991103 0.862074 20297 1 76 0.00463339 130 0 7.48787e+07 0.0161106 1.63882e+06 7.55509e+07 1.51061e+07 20308 3.71766e+07 0 0.121594 0.991103 0.854403 7.48787e+07 0.00689513 1.64495e+07 9.32015e+06 1.63887e+07 158 1.64705e+07 1.52963e+07 0.00575959 1.66362e+07 50.2502 0.0216916 0.995193 0 49.9074 GTEX-12WSH-2826-SM-5GCP5 1 B1 2 pieces; eccentric fibrofatty plaque 6.3 Blood Vessel Artery - Tibial 0007610 1015 1198 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983769 194286 0.97473 0.988733 0.811207 21359 1 76 0.00210043 138 0 6.43113e+07 0.0249648 770335 6.50442e+07 5.54198e+06 21384 3.18952e+07 0 0.163523 0.988733 0.802067 6.43113e+07 0.00351703 1.38921e+07 5.64328e+06 1.39527e+07 152 1.39961e+07 1.17157e+07 0.00280517 1.41548e+07 50.282 0.0118433 0.993697 0 50.1087 GTEX-12WSH-2926-SM-5GCMR 2 B1 1 piece; 20% posterior pituitary [annotated] 6.5 Pituitary Pituitary 0000007 1079 1134 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985758 300156 0.966533 0.990483 0.761552 25629 1 76 0.00220816 206 0 8.27207e+07 0.0331949 1.73666e+06 8.35155e+07 6.79834e+06 25660 4.10537e+07 0 0.204982 0.990483 0.754304 8.27207e+07 0.00342005 1.81784e+07 9.80621e+06 1.8295e+07 209 1.83976e+07 1.22545e+07 0.00281121 1.84483e+07 50.0688 0.0207945 0.995209 0 50.1599 GTEX-12WSH-3026-SM-5CVNI 1 B1 5 pieces 6.4 Brain Brain - Cortex 0001870 1079 1134 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985765 280885 0.96349 0.990182 0.829915 23650 1 76 0.00477793 195 0 7.83281e+07 0.03627 6.04065e+06 7.91047e+07 1.33889e+07 23669 3.88656e+07 0 0.133575 0.990182 0.821767 7.83281e+07 0.00739425 1.71917e+07 1.61231e+07 1.71831e+07 246 1.71702e+07 7.27599e+06 0.00608026 1.75018e+07 50.4782 0.0763627 0.994599 0 49.9876 GTEX-12WSH-3126-SM-5LZW8 1 B1 2 pieces 6.7 Brain Brain - Cerebellum 0002037 1081 1132 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990968 230130 0.950708 0.992146 0.730773 22408 1 76 0.00269797 124 0 6.21228e+07 0.0489692 1.18678e+06 6.26146e+07 3.16559e+06 22427 3.09162e+07 0 0.219935 0.992146 0.725034 6.21228e+07 0.00331046 1.35081e+07 9.11941e+06 1.35898e+07 143 1.36095e+07 7.20822e+06 0.00300385 1.35558e+07 49.9013 0.0189538 0.993324 0 50.1507 GTEX-12WSI-0004-SM-5ANGP B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSI-0004-SM-5DWRW B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSI-0004-SM-6WSCD B1 Blood Whole Blood 0013756 590 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-6066 11/08/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSI-0005-SM-5O99K B1 8 Blood Whole Blood 0013756 590 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.958493 328825 0.980866 0.961476 0.807757 17814 1 76 0.00215898 93 0 7.55887e+07 0.0175363 194378 7.86173e+07 1.08764e+07 17817 3.75478e+07 0 0.17311 0.961476 0.776639 7.55887e+07 0.00434668 1.78656e+07 1.29414e+08 1.79083e+07 120 1.79436e+07 2.05015e+07 0.00324943 1.80799e+07 50.1892 0.00247246 0.964459 0 50.0597 GTEX-12WSI-0008-SM-664MD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 924 BP-45552 RNA isolation_Trizol Manual (Cell Pellet) 11/06/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993555 436337 0.980004 0.994183 0.870063 20605 1 76 0.00191046 284 0 1.17894e+08 0.019676 287656 1.18584e+08 6.89549e+06 20619 5.87548e+07 0 0.109941 0.994183 0.865001 1.17894e+08 0.00259741 2.65523e+07 1.5355e+07 2.66559e+07 306 2.6601e+07 3.02445e+07 0.00225372 2.66869e+07 50.0806 0.00242575 0.99481 0 50.0973 GTEX-12WSI-0011-R11b-SM-5P9EZ B1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 574 BP-43965 RNA isolation_PAXgene Tissue miRNA 09/25/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990713 906701 0.944523 0.990916 0.758531 24851 1 76 0.00305358 375 0 1.27181e+08 0.0550387 1.39896e+06 1.28347e+08 4.51674e+06 24891 6.32347e+07 0 0.185992 0.990916 0.75164 1.27181e+08 0.00366898 2.73443e+07 2.49974e+07 2.74783e+07 350 2.74264e+07 1.75215e+07 0.00336122 2.74376e+07 50.0102 0.0108998 0.99112 0 50.1223 GTEX-12WSI-0011-R7b-SM-5GU78 B1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 574 BP-43747 RNA isolation_PAXgene Tissue miRNA 09/19/2013 LCSET-4803 02/19/2014 TruSeq.v1 RNASEQ 0.990913 909934 0.944421 0.993463 0.836677 22559 1 76 0.00176185 156 0 6.44666e+07 0.0552784 3.06933e+06 6.48908e+07 3.80559e+06 22573 3.20465e+07 0 0.107744 0.993463 0.831208 6.44666e+07 0.00269306 1.38783e+07 2.19795e+07 1.3929e+07 201 1.38574e+07 7.30415e+06 0.00222626 1.41014e+07 50.4364 0.0472999 0.996014 0 50.0911 GTEX-12WSI-0226-SM-5GCNA 1 B1 2 pieces moderate macro and microvesicular steatosis, moderate congestion, early bridging fibrosis 5.8 Liver Liver 0001114 744 990 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985778 149798 0.974756 0.9905 0.842327 20945 1 76 0.00199974 128 0 5.67595e+07 0.0251271 1.22426e+06 5.73039e+07 4.75448e+06 20958 2.81718e+07 0 0.132429 0.9905 0.834325 5.67595e+07 0.00333986 1.25766e+07 9.29047e+06 1.24613e+07 165 1.24293e+07 6.73956e+06 0.00266661 1.28564e+07 50.8446 0.0213644 0.995222 0 49.7698 GTEX-12WSI-0426-SM-5EQ5J 1 B1 2 pieces, ischemic changes, diffuse 5.8 Heart Heart - Atrial Appendage 0006631 746 988 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988278 221314 0.98539 0.991875 0.853938 19679 1 76 0.00179145 263 0 7.35515e+07 0.0144928 4.20325e+06 7.4154e+07 9.52786e+06 19686 3.65529e+07 0 0.131452 0.991875 0.847 7.35515e+07 0.00320049 1.60178e+07 2.74568e+07 1.58682e+07 316 1.56372e+07 6.25772e+06 0.00249342 1.64857e+07 51.3208 0.0566827 0.995473 0 49.7654 GTEX-12WSI-0826-SM-5EGKD 2 B1 2 pieces, moderate congestion, marked patchy interstitial fibrosis; emphysematous changes 7.2 Lung Lung 0008952 760 974 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988855 295057 0.974089 0.991893 0.783773 24171 1 76 0.00219202 163 0 8.14307e+07 0.0253981 282710 8.20962e+07 7.02545e+06 24212 4.04664e+07 0 0.190316 0.991893 0.777418 8.14307e+07 0.00330386 1.79056e+07 8.53829e+06 1.81659e+07 199 1.81606e+07 1.34325e+07 0.00274624 1.81437e+07 49.9766 0.00344364 0.99493 0 50.3608 GTEX-12WSI-1526-SM-5GCNM 1 B1 2 pieces, minimal fibrosis 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 775 959 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.977402 180746 0.978039 0.981986 0.84668 22741 1 76 0.0021932 152 0 6.85058e+07 0.0215638 285908 6.97625e+07 5.8062e+06 22755 3.39825e+07 0 0.131359 0.981986 0.831429 6.85058e+07 0.00350585 1.50264e+07 8.33461e+06 1.50817e+07 168 1.51136e+07 1.30433e+07 0.00284646 1.53004e+07 50.3072 0.0040983 0.986571 0 50.0917 GTEX-12WSI-2126-SM-5GCMV 2 B1 2 pieces, probable spermatogeneis; autolysis precludes assessment 6.2 Testis Testis 0000473 798 936 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984124 411257 0.924919 0.988908 0.722024 33484 1 76 0.00215014 181 0 8.81146e+07 0.0747495 877132 8.91029e+07 7.56229e+06 33549 4.37352e+07 0 0.202895 0.988908 0.714015 8.81146e+07 0.00339729 1.8141e+07 1.75489e+07 1.81814e+07 199 1.83173e+07 1.39389e+07 0.0027707 1.8377e+07 50.0815 0.00984403 0.993693 0 50.0556 GTEX-12WSJ-0002-SM-5TDBV B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -112 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990398 588762 0.968152 0.993173 0.82595 22109 1 76 0.00221626 169 0 7.69059e+07 0.0313133 612761 7.74346e+07 9.4311e+06 22138 3.82351e+07 0 0.142203 0.993173 0.820311 7.69059e+07 0.00395034 1.69957e+07 1.11371e+07 1.71259e+07 167 1.71433e+07 1.71352e+07 0.00308088 1.71929e+07 50.0723 0.00791328 0.995949 0 50.1908 GTEX-12WSJ-0003-SM-5ANG5 B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSJ-0003-SM-5DWRN B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSJ-0003-SM-6WSBN B1 Blood Whole Blood 0013756 -112 BP-41801 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2013 LCSET-6066 10/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSJ-0005-SM-5LU8S B1 9.6 Blood Whole Blood 0013756 -112 BP-41859 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990625 644982 0.959132 0.99254 0.806994 18976 1 76 0.00455053 112 0 6.24059e+07 0.0405925 164794 6.28749e+07 5.06094e+06 18986 3.10323e+07 0 0.152138 0.99254 0.800974 6.24059e+07 0.00390508 1.36199e+07 2.12292e+07 1.36767e+07 124 1.3706e+07 1.25081e+07 0.00422842 1.37187e+07 50.0232 0.00262098 0.994455 0 50.104 GTEX-12WSJ-0008-SM-664ML B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992813 426927 0.972373 0.993839 0.839189 22460 1 76 0.00200139 291 0 1.02256e+08 0.0272846 270945 1.0289e+08 6.13107e+06 22483 5.09381e+07 0 0.133184 0.993839 0.834018 1.02256e+08 0.00294098 2.27274e+07 1.46673e+07 2.28394e+07 275 2.28127e+07 2.29342e+07 0.0024707 2.2862e+07 50.0539 0.00263335 0.994865 0 50.1229 GTEX-12WSJ-0126-SM-5GCOM 0 B1 2 pieces, both with ~30% attached fat, fat necrosis 8.8 Adrenal Gland Adrenal Gland 0002369 106 1120 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985286 230695 0.978876 0.99013 0.831222 22169 1 76 0.00196217 202 0 7.50137e+07 0.0207452 1.4065e+06 7.57614e+07 6.54032e+06 22189 3.72412e+07 0 0.147655 0.99013 0.823018 7.50137e+07 0.003051 1.6626e+07 1.3873e+07 1.6439e+07 223 1.65836e+07 1.29488e+07 0.00250392 1.68119e+07 50.3418 0.0185649 0.994975 0 49.7173 GTEX-12WSJ-0226-SM-5GCP7 0 B1 2 pieces, hemosiderin-laden macrophages, focal emphysematous change and fibrosis 8.1 Lung Lung 0008952 109 1117 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985975 180769 0.976262 0.990603 0.821531 22806 1 76 0.00206424 134 0 6.49228e+07 0.0234018 335626 6.55387e+07 5.85853e+06 22827 3.22407e+07 0 0.154731 0.990603 0.813811 6.49228e+07 0.00317395 1.43963e+07 6.05362e+06 1.44776e+07 155 1.45515e+07 1.19244e+07 0.0026165 1.46091e+07 50.0988 0.00512104 0.995231 0 50.1408 GTEX-12WSJ-0326-SM-5GCMT 1 B1 2 pieces 6.4 Thyroid Thyroid 0002046 110 1116 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985256 222676 0.968651 0.990142 0.747785 23503 1 76 0.00201224 138 0 7.05363e+07 0.0311388 227526 7.12386e+07 6.18493e+06 23534 3.50099e+07 0 0.220866 0.990142 0.740414 7.05363e+07 0.00331205 1.54582e+07 7.24383e+06 1.55116e+07 159 1.55568e+07 1.0411e+07 0.00265894 1.57352e+07 50.285 0.00319386 0.995028 0 50.0862 GTEX-12WSJ-0526-SM-5GCOZ 0 B1 2 pieces 5.8 Spleen Spleen 0002106 118 1108 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985721 191979 0.963758 0.990171 0.78421 23242 1 76 0.00226515 133 0 6.44177e+07 0.035799 438021 6.50572e+07 5.26905e+06 23263 3.19702e+07 0 0.179548 0.990171 0.776501 6.44177e+07 0.0036182 1.41075e+07 9.33376e+06 1.41572e+07 153 1.41997e+07 9.75442e+06 0.00293863 1.43399e+07 50.2456 0.00673286 0.994621 0 50.0879 GTEX-12WSJ-0726-SM-5GCN6 0 B1 6 pieces, well trimmed 8.4 Esophagus Esophagus - Muscularis 0004648 126 1100 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985456 206594 0.977873 0.990415 0.855925 21037 1 76 0.00188515 165 0 6.68756e+07 0.0218222 572828 6.75228e+07 5.88732e+06 21051 3.31932e+07 0 0.121947 0.990415 0.847721 6.68756e+07 0.00307954 1.43506e+07 5.86921e+06 1.43353e+07 166 1.43844e+07 1.26482e+07 0.00247935 1.46069e+07 50.3837 0.00848348 0.995373 0 49.9733 GTEX-12WSJ-0826-SM-5PNWV 0 B1 6 pieces, well trimmed, few detached fragments of squamous epithelium 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 132 1094 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.987971 145064 0.972245 0.988819 0.873459 22168 1 76 0.00300948 216 0 9.83431e+07 0.0275355 994075 9.94551e+07 3.4363e+06 22178 4.88952e+07 0 0.0987859 0.988819 0.863692 9.83431e+07 0.00376188 2.1006e+07 8.52679e+06 2.13118e+07 255 2.10446e+07 2.09677e+07 0.00338536 2.13627e+07 50.3751 0.00999522 0.989666 0 50.3613 GTEX-12WSJ-0926-SM-5P9JD 1 B1 8 pieces, mucosa and muscularis, acute gastritis 7.1 Stomach Stomach 0000945 134 1092 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992093 221989 0.979741 0.992815 0.853501 22391 1 76 0.00300904 275 0 9.35759e+07 0.0200013 409122 9.42532e+07 3.00588e+06 22410 4.66326e+07 0 0.12624 0.992815 0.847368 9.35759e+07 0.00332825 2.05432e+07 7.91002e+06 2.08683e+07 272 2.07155e+07 1.74493e+07 0.00316853 2.07586e+07 50.052 0.00434067 0.993536 0 50.3925 GTEX-12WSJ-1126-SM-5LZVJ 1 B1 6 pieces, well trimmed 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 142 1084 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989755 223811 0.970652 0.991199 0.800379 21716 1 76 0.00244083 144 0 5.92161e+07 0.0291837 594850 5.97419e+07 2.91904e+06 21733 2.94701e+07 0 0.170274 0.991199 0.793335 5.92161e+07 0.00336986 1.3039e+07 8.43747e+06 1.31699e+07 150 1.31247e+07 8.93942e+06 0.00290467 1.31709e+07 50.0878 0.009957 0.992643 0 50.2498 GTEX-12WSJ-1226-SM-5LU91 0 B1 2 pieces, corpora albicantia/fibrosa 8.1 Ovary Ovary 0000992 144 1082 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991036 284059 0.968216 0.992832 0.756432 22617 1 76 0.00433783 139 0 7.0904e+07 0.0315725 88997 7.14159e+07 5.76976e+06 22654 3.52782e+07 0 0.211784 0.992832 0.75101 7.0904e+07 0.00353523 1.55759e+07 8.14953e+06 1.56716e+07 146 1.56734e+07 1.22737e+07 0.00393726 1.57017e+07 50.0451 0.00124618 0.994629 0 50.1532 GTEX-12WSJ-1326-SM-5GCOB 1 B1 6 pieces, two lack epithelium 7.1 Vagina Vagina 0000996 150 1076 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985776 189787 0.973463 0.990498 0.793751 22057 1 76 0.00204483 122 0 5.40315e+07 0.0262506 208830 5.45499e+07 4.56932e+06 22077 2.68168e+07 0 0.179712 0.990498 0.786209 5.40315e+07 0.00337525 1.17192e+07 4.42044e+06 1.17865e+07 127 1.18331e+07 9.18252e+06 0.00270687 1.19112e+07 50.1646 0.00382824 0.99522 0 50.1432 GTEX-12WSJ-1426-SM-5GCON 0 B1 6 pieces 7.6 Colon Colon - Sigmoid 0001159 165 1061 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985488 199688 0.976399 0.990293 0.813704 21784 1 76 0.00191967 132 0 6.00662e+07 0.0233536 287257 6.0655e+07 5.14412e+06 21799 2.98174e+07 0 0.162695 0.990293 0.805805 6.00662e+07 0.00321904 1.30569e+07 5.67536e+06 1.30932e+07 142 1.31436e+07 1.05466e+07 0.0025662 1.32748e+07 50.2484 0.00473592 0.995097 0 50.0693 GTEX-12WSJ-1526-SM-5GCNI 1 B1 6 pieces 7.7 Colon Colon - Transverse 0001157 160 1066 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985322 209869 0.977711 0.990495 0.832765 22411 1 76 0.00189543 161 0 6.79335e+07 0.0220293 453672 6.85855e+07 5.52096e+06 22425 3.37126e+07 0 0.144946 0.990495 0.82485 6.79335e+07 0.00323639 1.48893e+07 6.26760e+06 1.49406e+07 169 1.49989e+07 1.20286e+07 0.00256241 1.5164e+07 50.2737 0.0066147 0.995667 0 50.086 GTEX-12WSJ-1726-SM-5LZVV 1 B1 2 pieces, scattered atrophic fibers 8.7 Muscle Muscle - Skeletal 0011907 202 1024 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992648 162015 0.981035 0.994103 0.878691 19150 1 76 0.00210411 164 0 7.17373e+07 0.0187289 641374 7.21629e+07 3.71459e+06 19155 3.57468e+07 0 0.102344 0.994103 0.873509 7.17373e+07 0.00277562 1.57335e+07 8.41067e+06 1.59446e+07 192 1.58875e+07 1.44588e+07 0.00243937 1.58804e+07 49.9887 0.00888786 0.995557 0 50.3332 GTEX-12WSJ-1826-SM-5GCNY 1 B1 6 pieces, include up to 10% internal and attached fat, squamous epithelium measures ~31 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 208 1018 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984386 253717 0.97215 0.989247 0.793179 23103 1 76 0.00217052 199 0 7.02984e+07 0.0276238 416269 7.10625e+07 6.31905e+06 23122 3.48883e+07 0 0.178971 0.989247 0.78465 7.02984e+07 0.0035492 1.53167e+07 8.00432e+06 1.53576e+07 168 1.54333e+07 1.17308e+07 0.00285647 1.55642e+07 50.2111 0.00585778 0.994108 0 50.0667 GTEX-12WSK-0003-SM-5ANG3 B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSK-0003-SM-5DWRQ B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSK-0003-SM-6WSBW B1 Blood Whole Blood 0013756 -209 BP-41968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSK-0006-SM-5NQA1 B1 8.3 Blood Whole Blood 0013756 -209 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.966965 662071 0.968083 0.970105 0.806906 18021 1 76 0.00246361 118 0 9.0282e+07 0.0301233 229583 9.30641e+07 1.43334e+07 18027 4.48466e+07 0 0.161176 0.970105 0.782784 9.0282e+07 0.00552489 2.06247e+07 1.19682e+08 2.10274e+07 150 2.10579e+07 2.32576e+07 0.0039893 2.08952e+07 49.8061 0.00246693 0.973245 0 50.4833 GTEX-12WSK-0008-SM-5YY9R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992372 415115 0.975622 0.993559 0.846796 21403 1 76 0.00229261 288 0 1.02352e+08 0.0240705 368939 1.03016e+08 4.78577e+06 21428 5.10059e+07 0 0.128826 0.993559 0.841342 1.02352e+08 0.00281504 2.28599e+07 1.51066e+07 2.29211e+07 259 2.29184e+07 2.63807e+07 0.00255351 2.29914e+07 50.0796 0.00358138 0.994747 0 50.0669 GTEX-12WSK-0126-SM-5GCO7 1 B1 2 pieces, fairly well preserved; no significant abnormalities 6.9 Spleen Spleen 0002106 122 464 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982462 245418 0.964121 0.987225 0.781495 23496 1 76 0.00330097 136 0 7.37551e+07 0.0309912 437142 7.47095e+07 6.24458e+06 23521 3.64248e+07 0 0.182626 0.987225 0.771511 7.37551e+07 0.00458809 1.63095e+07 1.57453e+07 1.63642e+07 164 1.64755e+07 1.08553e+07 0.00394143 1.65345e+07 50.0894 0.00585122 0.991988 0 50.0837 GTEX-12WSK-0226-SM-5BC62 1 B1 2 pieces, generally well preserved; ~30% adherent/interstitial fat, rep.foci delineated; Islets well preserved, rep encircled; focus of early saponification ensquared 7.6 Pancreas Pancreas 0001150 124 462 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988452 259271 0.978981 0.99216 0.859412 21591 1 76 0.00274976 102 0 6.99361e+07 0.0206297 210193 7.04888e+07 1.93549e+07 21605 3.47541e+07 0 0.119568 0.99216 0.852674 6.99361e+07 0.00508147 1.59772e+07 2.35323e+07 1.61621e+07 108 1.61622e+07 2.10243e+07 0.00391126 1.6236e+07 50.114 0.00298194 0.995868 0 50.2877 GTEX-12WSK-0326-SM-5GCOJ 1 B1 2 pieces, mainly cortex; ~1x0.4mm focus of medualla encircled; nubbin of adherent fat delineated 7.9 Adrenal Gland Adrenal Gland 0002369 133 453 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985095 236902 0.977992 0.990042 0.81677 21956 1 76 0.00234786 200 0 7.83867e+07 0.0217473 2.29617e+06 7.91751e+07 6.71046e+06 21986 3.89201e+07 0 0.161222 0.990042 0.808637 7.83867e+07 0.00353512 1.72482e+07 1.45293e+07 1.72367e+07 241 1.72798e+07 1.09486e+07 0.00293852 1.75461e+07 50.3824 0.0290012 0.99499 0 49.9833 GTEX-12WSK-0426-SM-5GCNS 1 B1 6 pieces, minimal atherosis 8 Blood Vessel Artery - Aorta 0001496 136 450 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985416 185734 0.975525 0.98997 0.837053 20787 1 76 0.00201705 135 0 6.21973e+07 0.0240802 144763 6.28274e+07 5.6042e+06 20800 3.08844e+07 0 0.138472 0.98997 0.828658 6.21973e+07 0.00318967 1.32265e+07 5.10494e+06 1.33117e+07 143 1.33704e+07 1.23385e+07 0.00260067 1.34326e+07 50.1161 0.00230414 0.994525 0 50.1604 GTEX-12WSK-0526-SM-5CVNA 1 B1 2 pieces, no abnormalities 8 Heart Heart - Atrial Appendage 0006631 138 448 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988132 245423 0.981509 0.991099 0.840508 21137 1 76 0.00507616 194 0 8.77628e+07 0.0182555 2.40755e+06 8.85509e+07 1.51094e+07 21152 4.36211e+07 0 0.141001 0.991099 0.833027 8.77628e+07 0.00689028 1.86356e+07 2.40681e+07 1.85607e+07 247 1.83965e+07 1.25556e+07 0.0059805 1.89789e+07 50.7792 0.0271883 0.994067 0 49.8993 GTEX-12WSK-0626-SM-5LZUJ 1 B1 2 pieces, no significant ischemic changes 9 Heart Heart - Left Ventricle 0006566 148 438 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992815 258883 0.983894 0.994209 0.870643 21108 1 76 0.00242314 269 0 9.32199e+07 0.0157848 1.11962e+06 9.37628e+07 4.82789e+06 21120 4.64486e+07 0 0.113251 0.994209 0.865601 9.32199e+07 0.00301694 2.04261e+07 1.26810e+07 2.06363e+07 263 2.05574e+07 1.83245e+07 0.00271962 2.06222e+07 50.0787 0.011941 0.995604 0 50.2559 GTEX-12WSK-0726-SM-5LZUV 1 B1 2 pieces, minute (~0.5mm nubbin) ahderent fat delineated; no visible atherosis 8.1 Blood Vessel Artery - Coronary 0001621 155 431 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992011 211133 0.97669 0.99332 0.862892 21371 1 76 0.00233351 170 0 7.70574e+07 0.022893 291913 7.75756e+07 3.85412e+06 21386 3.83726e+07 0 0.113799 0.99332 0.857128 7.70574e+07 0.00301934 1.6505e+07 5.61926e+06 1.66917e+07 185 1.66638e+07 1.62726e+07 0.00267597 1.66284e+07 49.9468 0.00376295 0.994629 0 50.2812 GTEX-12WSK-0826-SM-5CVNP 1 B1 2 pieces, severe chronic fibrosing chronic and focally acute pneumonitis, features of DAD 7 Lung Lung 0008952 157 429 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987662 240461 0.969809 0.990845 0.760793 24762 1 76 0.00495155 133 0 7.48276e+07 0.0298771 294744 7.5519e+07 1.30886e+07 24793 3.71603e+07 0 0.209016 0.990845 0.753828 7.48276e+07 0.00676921 1.6449e+07 7.21083e+06 1.65919e+07 148 1.66391e+07 1.13058e+07 0.00585746 1.66274e+07 49.9823 0.00390291 0.994028 0 50.2163 GTEX-12WSK-0926-SM-5CVNQ 1 B1 2 pieces, no significant abnormalities; few incidental colloid cysts; rep encircled 6.6 Thyroid Thyroid 0002046 160 426 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98366 254145 0.965596 0.98827 0.739168 24067 1 76 0.00489018 139 0 8.17917e+07 0.0341474 343283 8.27624e+07 1.65696e+07 24114 4.05617e+07 0 0.226428 0.98827 0.730498 8.17917e+07 0.00703172 1.78098e+07 9.38374e+06 1.79696e+07 157 1.80532e+07 1.20163e+07 0.00595595 1.80803e+07 50.0375 0.00414781 0.99288 0 50.2233 GTEX-12WSK-1026-SM-5CVNR 1 B1 2 pieces, minimal fibrous/vascular tissue 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 425 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.978126 207855 0.977016 0.982356 0.825355 22734 1 76 0.00487813 159 0 7.55351e+07 0.0227342 560914 7.68918e+07 1.38506e+07 22752 3.74787e+07 0 0.151661 0.982356 0.810793 7.55351e+07 0.00711304 1.65887e+07 8.62305e+06 1.67208e+07 169 1.67108e+07 1.19077e+07 0.00599078 1.69005e+07 50.2821 0.00729485 0.986587 0 50.1982 GTEX-12WSK-1126-SM-5LZV8 1 B1 6 pieces, squamous mucosa well preserved; ~0.5mm, ~25% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 168 418 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991399 244286 0.978653 0.992786 0.829221 21550 1 76 0.0025411 149 0 7.1811e+07 0.0209145 303617 7.23328e+07 3.63719e+06 21568 3.5767e+07 0 0.149431 0.992786 0.823239 7.1811e+07 0.00322952 1.62239e+07 8.92373e+06 1.63053e+07 163 1.63129e+07 1.42071e+07 0.00288483 1.63117e+07 49.9982 0.0041975 0.994174 0 50.1252 GTEX-12WSK-1326-SM-5CVNM 1 B1 6 pieces, all muscularis, good sepcimens 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 171 415 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986548 351674 0.976581 0.990702 0.830265 22331 1 76 0.00467496 148 0 7.65392e+07 0.0231097 572532 7.72575e+07 1.28112e+07 22353 3.79694e+07 0 0.146315 0.990702 0.822545 7.65392e+07 0.00693629 1.65329e+07 6.92909e+06 1.6636e+07 163 1.66588e+07 1.32815e+07 0.00580089 1.68076e+07 50.2223 0.00741069 0.994856 0 50.1554 GTEX-12WSK-1426-SM-5CVNN 1 B1 6 pieces, well preserved, mucosa is ~1 mm~30% thickness, no notable abnormalities 6.8 Stomach Stomach 0000945 176 410 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.980729 183090 0.982161 0.984393 0.841328 21813 1 76 0.00471385 230 0 7.8459e+07 0.0175263 1.13092e+06 7.97029e+07 1.42434e+07 21830 3.89551e+07 0 0.140834 0.984393 0.828197 7.8459e+07 0.00678081 1.78918e+07 7.01471e+07 1.80235e+07 178 1.80218e+07 1.76146e+07 0.00574348 1.8164e+07 50.1965 0.0141891 0.988057 0 50.1833 GTEX-12WSK-1526-SM-5CVNO 2 B1 6 pieces, mucosa moderately autolyzed but lymphoid aggregates well preserved, ~5-10% of sections; rep one delineated. 6 Small Intestine Small Intestine - Terminal Ileum 0001211 182 404 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986042 210022 0.973716 0.990169 0.809765 24217 1 76 0.0049726 165 0 8.20591e+07 0.0260401 1.00757e+06 8.28738e+07 1.6279e+07 24252 4.07194e+07 0 0.163951 0.990169 0.801805 8.20591e+07 0.00715352 1.79223e+07 9.50695e+06 1.80642e+07 185 1.80539e+07 1.17762e+07 0.00605851 1.82408e+07 50.2575 0.0121579 0.994297 0 50.1972 GTEX-12WSK-1926-SM-5LZVK 1 B1 2 pieces, post menopausal-type atrophy, prominent corproa albicantia 7.7 Ovary Ovary 0000992 193 393 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991451 218871 0.964762 0.992525 0.743229 22421 1 76 0.00244092 140 0 6.80346e+07 0.0349757 197540 6.8547e+07 3.23369e+06 22461 3.3871e+07 0 0.221533 0.992525 0.737673 6.80346e+07 0.00311321 1.48824e+07 6.95314e+06 1.49782e+07 144 1.49813e+07 1.19135e+07 0.0027767 1.49532e+07 49.9531 0.00288182 0.993599 0 50.1604 GTEX-12WSK-2026-SM-5CVNB 1 B1 2 pieces, all myometrium; no endometrial glands/stroma 6.5 Uterus Uterus 0000995 194 392 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986058 220853 0.974912 0.990105 0.838457 22950 1 76 0.00475983 155 0 7.9721e+07 0.0247005 234259 8.05177e+07 1.41908e+07 22969 3.95518e+07 0 0.136455 0.990105 0.830161 7.9721e+07 0.00682788 1.73124e+07 8.04651e+06 1.74542e+07 164 1.74833e+07 1.59029e+07 0.00578963 1.75911e+07 50.1537 0.00290941 0.994152 0 50.2039 GTEX-12WSK-2126-SM-5CVNC 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~ 40-60 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 196 390 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98383 246528 0.97528 0.988354 0.830839 22522 1 76 0.00493485 186 0 7.70544e+07 0.0244852 503972 7.79623e+07 1.59944e+07 22538 3.82242e+07 0 0.144442 0.988354 0.821163 7.70544e+07 0.00711808 1.68617e+07 1.15837e+07 1.70317e+07 166 1.70972e+07 1.37601e+07 0.00602147 1.71304e+07 50.0484 0.0064643 0.992878 0 50.2507 GTEX-12WSK-2226-SM-5GCO5 0 B1 2 pieces, well preserved but inactive appearing TDLUs in one section, rep delineated 6.9 Breast Breast - Mammary Tissue 0008367 213 373 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985839 201780 0.979094 0.990715 0.843277 22532 1 76 0.00198234 160 0 6.94809e+07 0.0205619 294304 7.0132e+07 6.24718e+06 22548 3.4484e+07 0 0.135817 0.990715 0.835448 6.94809e+07 0.00325214 1.52265e+07 6.06457e+06 1.53136e+07 167 1.53754e+07 1.35976e+07 0.00261412 1.54883e+07 50.183 0.00419643 0.995592 0 50.1426 GTEX-12WSK-2326-SM-5GCOH 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~30 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 208 378 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982953 353289 0.96269 0.988547 0.771421 22505 1 76 0.00223414 143 0 5.67058e+07 0.0371026 504071 5.73628e+07 4.78314e+06 22522 2.81184e+07 0 0.19127 0.988547 0.762586 5.67058e+07 0.00378763 1.23042e+07 1.06234e+07 1.23462e+07 131 1.24149e+07 9.12545e+06 0.00300649 1.25448e+07 50.2604 0.00878742 0.994141 0 50.0852 GTEX-12WSK-2626-SM-5GCOT 0 B1 2 pieces, clean specimens 7.4 Nerve Nerve - Tibial 0001323 215 371 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984373 225395 0.970158 0.989458 0.788265 23295 1 76 0.00211212 184 0 7.46918e+07 0.0295517 313463 7.54876e+07 6.56437e+06 23328 3.7037e+07 0 0.181893 0.989458 0.779956 7.46918e+07 0.00343045 1.64017e+07 6.11156e+06 1.65077e+07 178 1.65727e+07 1.23192e+07 0.0027679 1.67025e+07 50.195 0.00415251 0.994544 0 50.161 GTEX-12WSK-2726-SM-5CVND 0 B1 2 pieces, clean specimens 7.2 Blood Vessel Artery - Tibial 0007610 218 368 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988068 161523 0.977206 0.991498 0.860686 20377 1 76 0.00459601 132 0 6.28358e+07 0.0223807 236495 6.33747e+07 1.08332e+07 20385 3.11839e+07 0 0.11652 0.991498 0.853368 6.28358e+07 0.00675586 1.34419e+07 5.07966e+06 1.35237e+07 136 1.35222e+07 1.27964e+07 0.0056722 1.36479e+07 50.2314 0.0037317 0.994927 0 50.1517 GTEX-12WSK-5005-SM-AN3Y3 B1 Heart Heart - Left Ventricle 0006566 149 ChIP-Seq GTEX-12WSK-5015-SM-AN3Y2 B1 Muscle Muscle - Skeletal 0011907 213 ChIP-Seq GTEX-12WSL-0002-SM-664MF B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -76 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992025 840731 0.966836 0.992835 0.812037 21989 1 76 0.00241968 281 0 1.17528e+08 0.0318743 708606 1.18377e+08 7.35576e+06 22038 5.84614e+07 0 0.154799 0.992835 0.806219 1.17528e+08 0.00320695 2.62128e+07 1.93072e+07 2.62493e+07 300 2.62154e+07 2.62859e+07 0.00281299 2.63484e+07 50.1265 0.00598604 0.993644 0 50.0347 GTEX-12WSL-0003-SM-5ANFZ B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSL-0003-SM-5DWRL B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12WSL-0003-SM-6WSBO B1 Blood Whole Blood 0013756 -76 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSL-0005-SM-5NQAD B1 8.2 Blood Whole Blood 0013756 -76 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.986935 756250 0.9586 0.989909 0.812378 17956 1 76 0.0025259 131 0 7.66255e+07 0.0408277 233375 7.74065e+07 1.17085e+07 17961 3.81091e+07 0 0.146222 0.989909 0.80418 7.66255e+07 0.00545865 1.68157e+07 6.11234e+07 1.70469e+07 146 1.70593e+07 1.71519e+07 0.00398787 1.70252e+07 49.9499 0.00301493 0.992884 0 50.3414 GTEX-12WSL-0008-SM-664MM B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 353 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.994206 443335 0.977632 0.994726 0.870956 20274 1 76 0.00192503 286 0 1.03763e+08 0.0220659 195478 1.04313e+08 6.14169e+06 20288 5.17201e+07 0 0.106676 0.994726 0.866362 1.03763e+08 0.00253207 2.32495e+07 1.47193e+07 2.33196e+07 278 2.32961e+07 2.61419e+07 0.00222839 2.33321e+07 50.0386 0.00187395 0.995245 0 50.0753 GTEX-12WSL-0226-SM-5CVMJ 1 B1 2 pieces; 20% macrovesicular steatosis 6.7 Liver Liver 0001114 209 644 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987386 217798 0.979569 0.991163 0.855336 20380 1 76 0.00502274 121 0 7.05768e+07 0.0188716 878046 7.1206e+07 1.38589e+07 20391 3.49984e+07 0 0.124233 0.991163 0.847778 7.05768e+07 0.00709652 1.55159e+07 1.21373e+07 1.55038e+07 152 1.55132e+07 1.22469e+07 0.00605568 1.57564e+07 50.3889 0.0123311 0.99494 0 49.9805 GTEX-12WSL-0326-SM-5CVMK 1 B1 2 pieces; 1 with 1 mm fibrofatty capsule 8.1 Adrenal Gland Adrenal Gland 0002369 213 640 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987299 211168 0.978541 0.991325 0.835096 22406 1 76 0.00493266 133 0 6.84352e+07 0.0211806 1.71893e+06 6.90341e+07 1.31596e+07 22422 3.3971e+07 0 0.143445 0.991325 0.827852 6.84352e+07 0.00724091 1.52102e+07 9.36887e+06 1.51794e+07 151 1.52096e+07 1.04447e+07 0.0060821 1.5419e+07 50.3419 0.0248997 0.995352 0 49.9493 GTEX-12WSL-0426-SM-5GCNX 1 B1 2 pieces;[PREVIOUS REVIEW BEFORE RESOLUTION: Heart NOT Pancreas; 10% internal fat in 1 piece;] AFTER RESOLUTION: Pancreas with 60% external fat; foci of atrophy & fibrosis (annotated). 7.4 Pancreas Pancreas 0001150 218 635 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98689 215100 0.976577 0.991345 0.837749 22419 1 76 0.00224949 124 0 8.19073e+07 0.023196 335630 8.26224e+07 6.93293e+06 22442 4.06778e+07 0 0.138828 0.991345 0.830499 8.19073e+07 0.00339407 1.86832e+07 1.97945e+07 1.87875e+07 139 1.88436e+07 2.20797e+07 0.00281921 1.89882e+07 50.1911 0.00406222 0.995801 0 50.1391 GTEX-12WSL-0626-SM-5GCOY 1 B1 2 pieces; small focus [0.3 mm] parathyroid in 1 piece; 20% fat in 1 piece 7.5 Thyroid Thyroid 0002046 230 623 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985934 208011 0.965482 0.990329 0.738226 23868 1 76 0.00208583 129 0 6.51773e+07 0.034214 155278 6.58138e+07 5.08076e+06 23899 3.2351e+07 0 0.227256 0.990329 0.731086 6.51773e+07 0.0032823 1.42078e+07 5.70998e+06 1.42769e+07 140 1.43605e+07 1.04558e+07 0.00268141 1.43927e+07 50.056 0.00235935 0.994724 0 50.1212 GTEX-12WSL-0926-SM-5N9EK 1 B1 2 pieces; non-compromising atheromatous plaques; 2.5 x 0.4 mm external fat on 1 7.1 Blood Vessel Artery - Coronary 0001621 250 603 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989325 385521 0.976494 0.990906 0.864011 23843 1 76 0.00381075 287 0 1.27801e+08 0.0232049 677646 1.28974e+08 6.24728e+06 23864 6.35618e+07 0 0.112483 0.990906 0.856153 1.27801e+08 0.00387116 2.77112e+07 1.0745e+07 2.80481e+07 330 2.79517e+07 2.47973e+07 0.0038409 2.80015e+07 50.0445 0.00525411 0.992486 0 50.3021 GTEX-12WSL-1026-SM-5CVNJ 1 B1 2 pieces; bronchus and large blood vessel comprise 50% of 1 piece 8.3 Lung Lung 0008952 265 588 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986901 280320 0.976763 0.990754 0.818149 24037 1 76 0.00478456 166 0 8.43791e+07 0.0228715 375825 8.51665e+07 1.5559e+07 24057 4.18794e+07 0 0.158614 0.990754 0.810585 8.43791e+07 0.00687512 1.86089e+07 8.13066e+06 1.87536e+07 176 1.88154e+07 1.60939e+07 0.00582577 1.88568e+07 50.0549 0.00441283 0.994608 0 50.1936 GTEX-12WSL-1126-SM-5CVNK 1 B1 2 pieces 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 269 584 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987064 253964 0.977152 0.990665 0.83684 23016 1 76 0.0047626 172 0 8.16616e+07 0.02255 453028 8.24311e+07 1.55747e+07 23035 4.0548e+07 0 0.140313 0.990665 0.829028 8.16616e+07 0.00675324 1.78914e+07 8.00422e+06 1.80857e+07 186 1.81114e+07 1.44368e+07 0.0057543 1.81438e+07 50.0447 0.00549584 0.994267 0 50.27 GTEX-12WSL-1226-SM-5DUXE 1 B1 6 pieces; 3 are all muscle, 3 have 20-30% fibrofatty stroma 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 276 577 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989222 243017 0.977548 0.992278 0.844593 20728 1 76 0.00181928 144 0 5.94675e+07 0.0221449 565768 5.99303e+07 5.53952e+06 20742 2.95793e+07 0 0.132955 0.992278 0.83807 5.94675e+07 0.00289762 1.29138e+07 5.39238e+06 1.29983e+07 144 1.30183e+07 1.11709e+07 0.00235679 1.30647e+07 50.0889 0.00944043 0.995333 0 50.163 GTEX-12WSL-1326-SM-5LZVW 0 B1 6 pieces; well dissected muscle 8.3 Esophagus Esophagus - Muscularis 0004648 286 567 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991562 244260 0.977133 0.993112 0.842595 22027 1 76 0.00236581 169 0 7.36997e+07 0.0225626 464583 7.42109e+07 3.66503e+06 22040 3.67006e+07 0 0.134539 0.993112 0.836791 7.36997e+07 0.00301873 1.61952e+07 6.02424e+06 1.63225e+07 181 1.63283e+07 1.40932e+07 0.00269176 1.62969e+07 49.952 0.00626031 0.994662 0 50.1956 GTEX-12WSL-1526-SM-5GCP8 0 B1 5 pieces; well dissected mucosa with prominent muscularis mucosae 8.8 Esophagus Esophagus - Mucosa 0006920 291 562 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985536 233900 0.977389 0.989885 0.844337 21977 1 76 0.00210779 142 0 6.72048e+07 0.0223182 265302 6.78915e+07 5.61796e+06 21989 3.33849e+07 0 0.133051 0.989885 0.835797 6.72048e+07 0.00324091 1.51119e+07 9.30152e+06 1.51695e+07 152 1.52596e+07 1.4169e+07 0.00267186 1.53049e+07 50.074 0.00390773 0.994234 0 50.0952 GTEX-12WSL-1626-SM-5GCMU 2 B1 6 pieces; partly autolyzed mucosa with variable amounts of muscularis 7.6 Colon Colon - Transverse 0001157 293 560 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98589 275955 0.975352 0.990543 0.837579 22671 1 76 0.00202884 172 0 7.50646e+07 0.0243449 815766 7.57813e+07 6.49764e+06 22686 3.72703e+07 0 0.137773 0.990543 0.829658 7.50646e+07 0.00320266 1.62807e+07 7.23694e+06 1.63345e+07 190 1.64015e+07 1.36274e+07 0.00261299 1.65398e+07 50.2099 0.0107647 0.995195 0 50.0826 GTEX-12WSL-1826-SM-5LZW9 1 B1 6 pieces; well dissected muscularis 7.2 Colon Colon - Sigmoid 0001159 310 543 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992283 222256 0.973216 0.993519 0.806986 22533 1 76 0.00245982 165 0 7.37801e+07 0.0265513 476718 7.42614e+07 3.61583e+06 22555 3.67501e+07 0 0.16623 0.993519 0.801756 7.37801e+07 0.00306905 1.60132e+07 6.73529e+06 1.6184e+07 177 1.61699e+07 1.24206e+07 0.00276406 1.61161e+07 49.9167 0.00641946 0.994754 0 50.2652 GTEX-12WSL-2026-SM-5GCML 1 B1 6 pieces; <10% intradermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 326 527 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984921 261520 0.974773 0.990062 0.835332 23784 1 76 0.00206797 212 0 8.25541e+07 0.0249974 431862 8.33827e+07 7.30002e+06 23805 4.09651e+07 0 0.139442 0.990062 0.82703 8.25541e+07 0.00348411 1.80822e+07 8.40863e+06 1.82477e+07 223 1.8319e+07 1.44698e+07 0.00277236 1.84155e+07 50.1313 0.00517927 0.995203 0 50.2277 GTEX-12WSL-2126-SM-5GCNG 0 B1 3 pieces; well preserved, well dissected glands 8.2 Salivary Gland Minor Salivary Gland 0006330 329 524 BP-43881 RNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.982019 253924 0.970028 0.987623 0.766005 23069 1 76 0.00234866 127 0 5.83167e+07 0.0293291 271847 5.90476e+07 5.05953e+06 23086 2.89046e+07 0 0.204024 0.987623 0.756524 5.83167e+07 0.0037809 1.3052e+07 9.70379e+06 1.30245e+07 134 1.31327e+07 9.27489e+06 0.00306071 1.32614e+07 50.2438 0.00460387 0.993228 0 49.9472 GTEX-12WSL-2326-SM-5DUXQ 2 B1 2 pieces; spermatogenesis 6.2 Testis Testis 0000473 344 509 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987637 284631 0.924314 0.990108 0.719041 31788 1 76 0.00203276 133 0 6.20082e+07 0.0753565 328431 6.26277e+07 5.78737e+06 31831 3.0857e+07 0 0.205273 0.990108 0.711928 6.20082e+07 0.00307757 1.26726e+07 9.5471e+06 1.2721e+07 127 1.27639e+07 9.86233e+06 0.00255386 1.27676e+07 50.0073 0.00524418 0.992579 0 50.0952 GTEX-12WSL-2426-SM-5GCN7 1 B1 2 pieces; 1 piece has 40% fibrous component; other has a large central defect (40%) 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 347 506 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984155 272614 0.978589 0.989351 0.836105 22489 1 76 0.00213462 174 0 8.06659e+07 0.0203673 79581 8.15341e+07 6.87955e+06 22502 4.00009e+07 0 0.142484 0.989351 0.827201 8.06659e+07 0.00339914 1.75985e+07 8.67147e+06 1.77297e+07 202 1.78641e+07 1.65388e+07 0.00276356 1.78669e+07 50.0039 0.000976045 0.994548 0 50.1856 GTEX-12WSL-2526-SM-5GCNJ 1 B1 6 pieces; 10% intradermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 353 500 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984277 228350 0.975912 0.989122 0.793442 22616 1 76 0.00214855 144 0 6.50847e+07 0.0238086 120103 6.58004e+07 6.01798e+06 22640 3.2305e+07 0 0.18247 0.989122 0.784811 6.50847e+07 0.00328399 1.43117e+07 6.58227e+06 1.43603e+07 142 1.44755e+07 1.23631e+07 0.00271349 1.44994e+07 50.0413 0.00182526 0.993968 0 50.0849 GTEX-12WSL-2626-SM-5GCNV 0 B1 2 pieces; well trimmed, no fatty tissue 7.9 Blood Vessel Artery - Tibial 0007610 354 499 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985914 188914 0.9781 0.990549 0.858253 20191 1 76 0.00195032 129 0 5.73237e+07 0.021487 204682 5.78706e+07 5.11912e+06 20200 2.84512e+07 0 0.119847 0.990549 0.850142 5.73237e+07 0.00327809 1.23486e+07 4.3433e+06 1.24088e+07 137 1.24553e+07 1.20223e+07 0.0026111 1.25529e+07 50.1951 0.00353689 0.995185 0 50.1215 GTEX-12WSL-2726-SM-5CVNL 0 B1 2 pieces; 1 with 1 mm dense fibrous border on one edge; other piece has 20% internal fat 8.7 Muscle Muscle - Skeletal 0011907 355 498 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987913 234967 0.982054 0.991541 0.865243 20258 1 76 0.00467666 147 0 7.4757e+07 0.0176854 483929 7.53948e+07 1.45486e+07 20271 3.71275e+07 0 0.116811 0.991541 0.857924 7.4757e+07 0.00666086 1.61709e+07 8.27890e+06 1.61628e+07 153 1.62178e+07 1.56164e+07 0.00566513 1.63658e+07 50.2271 0.0064186 0.995168 0 49.9874 GTEX-12WSL-2826-SM-5LZWL 0 B1 2 pieces; well trimmed, but 20% internal fat 5.7 Nerve Nerve - Tibial 0001323 356 497 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99065 209760 0.970427 0.991982 0.76732 23255 1 76 0.00249441 156 0 6.72856e+07 0.0292989 196279 6.78294e+07 3.34796e+06 23282 3.34934e+07 0 0.203108 0.991982 0.761167 6.72856e+07 0.00321427 1.48317e+07 5.79372e+06 1.49295e+07 150 1.49345e+07 1.12383e+07 0.00285386 1.49137e+07 49.9651 0.00289371 0.993314 0 50.1643 GTEX-12WSL-5001-SM-AN3XD B1 Heart Heart - Left Ventricle 0006566 240 ChIP-Seq GTEX-12WSL-5016-SM-AN3XE B1 Muscle Muscle - Skeletal 0011907 ChIP-Seq GTEX-12WSM-0001-SM-5ANFP B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSM-0001-SM-5DWS1 B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSM-0001-SM-6WSBS B1 Blood Whole Blood 0013756 707 BP-42167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSM-0005-SM-5NQB3 B1 8.3 Blood Whole Blood 0013756 707 BP-42239 RNA isolation_PAXgene Blood RNA (Manual) 08/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.950325 277434 0.98536 0.954009 0.805532 17618 1 76 0.00276166 110 0 9.41323e+07 0.0126089 163857 9.86702e+07 1.56737e+07 17620 4.67018e+07 0 0.179827 0.954009 0.768485 9.41323e+07 0.00601728 2.22416e+07 1.57146e+08 2.25451e+07 146 2.25875e+07 2.63564e+07 0.00438318 2.25777e+07 49.9891 0.00166065 0.957693 0 50.3388 GTEX-12WSM-0008-SM-5S2VD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 839 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991851 396956 0.971129 0.994293 0.832506 21477 1 76 0.00175356 185 0 7.91775e+07 0.0285325 350365 7.96319e+07 7.85205e+06 21502 3.9415e+07 0 0.138623 0.994293 0.827754 7.91775e+07 0.00276167 1.74334e+07 1.24474e+07 1.7595e+07 184 1.76048e+07 1.72756e+07 0.00225638 1.76159e+07 50.0158 0.0043998 0.996734 0 50.2307 GTEX-12WSM-0011-R10a-SM-5DUWV B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987305 689506 0.960645 0.991065 0.83912 23467 1 76 0.00201911 198 0 7.97035e+07 0.0387063 2.62064e+06 8.04221e+07 8.04226e+06 23486 3.96024e+07 0 0.121525 0.991065 0.831622 7.97035e+07 0.00309024 1.73287e+07 1.95923e+07 1.73065e+07 253 1.73378e+07 1.12842e+07 0.00255264 1.75726e+07 50.3364 0.0325861 0.994825 0 49.968 GTEX-12WSM-0011-R10a-SM-AHZ6F B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 694 ChIP-Seq GTEX-12WSM-0011-R10a-SM-CYKRA B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 RIP-Seq GTEX-12WSM-0011-R11a-SM-5DUX8 B1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986922 613752 0.947164 0.99045 0.756294 23010 1 76 0.00216119 127 0 6.64157e+07 0.0522996 813712 6.70561e+07 6.2142e+06 23035 3.29923e+07 0 0.190869 0.99045 0.749072 6.64157e+07 0.00325998 1.42752e+07 1.27391e+07 1.4315e+07 156 1.43895e+07 9.1874e+06 0.00270863 1.44217e+07 50.056 0.0121348 0.993977 0 50.0697 GTEX-12WSM-0011-R1a-SM-5LZW6 B1, A1 6.3 Brain Brain - Hippocampus 0001954 694 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99202 303764 0.964091 0.993071 0.844683 21728 1 76 0.00281957 152 0 6.04674e+07 0.0357654 4.783e+06 6.08893e+07 2.8147e+06 21741 3.00969e+07 0 0.119408 0.993071 0.83883 6.04674e+07 0.00353984 1.31273e+07 1.38552e+07 1.3449e+07 196 1.32205e+07 4.28634e+06 0.00317933 1.34069e+07 50.35 0.0785524 0.994122 0 50.6052 GTEX-12WSM-0011-R3b-SM-5LZWI B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 694 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991974 542527 0.959109 0.993363 0.836119 22804 1 76 0.00262946 197 0 7.09671e+07 0.0406119 4.0255e+06 7.14412e+07 3.60699e+06 22816 3.53389e+07 0 0.122991 0.993363 0.830569 7.09671e+07 0.00331646 1.53266e+07 1.71748e+07 1.56297e+07 238 1.55252e+07 7.20991e+06 0.00297248 1.55169e+07 49.9867 0.056347 0.994752 0 50.4897 GTEX-12WSM-0011-R5a-SM-5EQ4Y B1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989507 739922 0.956383 0.992954 0.844038 22207 1 76 0.00220775 267 0 7.45014e+07 0.0433464 4.76657e+06 7.503e+07 9.75152e+06 22216 3.70276e+07 0 0.112345 0.992954 0.838091 7.45014e+07 0.00339019 1.60262e+07 2.83461e+07 1.61011e+07 263 1.5923e+07 7.33676e+06 0.00279692 1.6463e+07 50.8338 0.0635288 0.996402 0 50.1166 GTEX-12WSM-0011-R6b-SM-5EQ6N B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990333 739772 0.957275 0.9927 0.811806 23612 1 76 0.00242578 369 0 9.53599e+07 0.042575 7.60554e+06 9.60611e+07 1.14647e+07 23628 4.74575e+07 0 0.14547 0.9927 0.80588 9.53599e+07 0.00350525 2.0339e+07 4.10802e+07 2.04629e+07 345 2.0235e+07 6.78183e+06 0.00296423 2.07836e+07 50.6688 0.079174 0.995068 0 50.1519 GTEX-12WSM-0011-R7b-SM-5EGLD B1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 694 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985503 577700 0.965258 0.989344 0.824208 22809 1 76 0.00232237 268 0 9.48713e+07 0.0345768 7.57971e+06 9.58932e+07 9.16306e+06 22820 4.71564e+07 0 0.14105 0.989344 0.815425 9.48713e+07 0.00351382 2.02516e+07 4.79711e+07 2.02714e+07 328 2.00835e+07 7.44344e+06 0.00291578 2.07754e+07 50.8467 0.0790433 0.993185 0 50.0244 GTEX-12WSM-0011-R8a-SM-5DUWJ B1, A1 7.6 Brain Brain - Hypothalamus 0001898 694 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987834 598297 0.957039 0.990791 0.794765 24483 1 76 0.00231188 199 0 7.66758e+07 0.0427178 4.39661e+06 7.73885e+07 6.89539e+06 24509 3.81328e+07 0 0.162274 0.990791 0.787446 7.66758e+07 0.00337139 1.64228e+07 2.9086e+07 1.64201e+07 253 1.63577e+07 6.99904e+06 0.00284005 1.6694e+07 50.5087 0.0568122 0.993747 0 49.9959 GTEX-12WSM-0226-SM-5LZV6 0 B1 2 pieces fascia/fibrous tissue is ~10-15% total 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 842 1061 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988042 231688 0.974085 0.989689 0.801588 22682 1 76 0.00267505 146 0 6.9316e+07 0.0255986 401545 7.00382e+07 3.62197e+06 22704 3.4485e+07 0 0.172498 0.989689 0.793323 6.9316e+07 0.00347183 1.51414e+07 7.81083e+06 1.53544e+07 163 1.53479e+07 1.14742e+07 0.00307278 1.52549e+07 49.8482 0.00573323 0.991336 0 50.3492 GTEX-12WSM-0326-SM-5LZVI 0 B1 2 pieces, fat is < 5% total, rep foci delineated 8.1 Muscle Muscle - Skeletal 0011907 845 1058 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992993 222496 0.984829 0.99418 0.866184 19302 1 76 0.00243624 155 0 7.10577e+07 0.0150055 670608 7.14736e+07 3.53462e+06 19312 3.54094e+07 0 0.118645 0.99418 0.861142 7.10577e+07 0.00303565 1.54876e+07 1.1696e+07 1.5791e+07 179 1.56889e+07 1.2799e+07 0.00273559 1.56628e+07 49.9584 0.00938259 0.995366 0 50.4849 GTEX-12WSM-0326-SM-CYKW3 0 B1 2 pieces, fat is < 5% total, rep foci delineated 8.1 Muscle Muscle - Skeletal 0011907 845 1058 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 RIP-Seq GTEX-12WSM-0426-SM-5LZVU 0 B1 2 pieces, no adherent fat, good specimens 6.8 Nerve Nerve - Tibial 0001323 847 1056 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990141 165690 0.968265 0.991226 0.777136 23022 1 76 0.0025385 150 0 6.35961e+07 0.0314448 235391 6.4159e+07 3.07777e+06 23050 3.16522e+07 0 0.191129 0.991226 0.770317 6.35961e+07 0.00326071 1.39822e+07 5.92571e+06 1.40468e+07 149 1.40346e+07 1.00456e+07 0.00289921 1.40611e+07 50.0472 0.00366887 0.992312 0 50.1153 GTEX-12WSM-0526-SM-5GCO8 0 B1 2 pieces, Monckeberg's medial sclerosis/calcifications present, rep delineated 6.4 Blood Vessel Artery - Tibial 0007610 848 1055 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.981416 309057 0.973278 0.986672 0.836396 20828 1 76 0.00212962 149 0 7.2255e+07 0.0263659 250237 7.3231e+07 6.17471e+06 20844 3.58019e+07 0 0.136882 0.986672 0.825248 7.2255e+07 0.00361647 1.53211e+07 6.7961e+06 1.54152e+07 168 1.54431e+07 1.39586e+07 0.00286908 1.56542e+07 50.3395 0.00341709 0.991929 0 50.1531 GTEX-12WSM-0626-SM-5GCOK 0 B1 2 pieces, ~5% fibro/fascia tissue, rep delineated 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 969 934 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983796 258635 0.974986 0.989215 0.796229 22850 1 76 0.00225891 134 0 6.20484e+07 0.0247018 149234 6.27248e+07 5.18265e+06 22867 3.07673e+07 0 0.178757 0.989215 0.787642 6.20484e+07 0.00365098 1.3606e+07 6.71049e+06 1.36349e+07 145 1.37263e+07 1.05168e+07 0.00295113 1.38344e+07 50.1962 0.00237919 0.994635 0 50.0532 GTEX-12WSM-0726-SM-5GCOW 1 B1 2 pieces, ~ 5% macrovesicular fat. 5.9 Liver Liver 0001114 971 932 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984293 313460 0.972499 0.989101 0.820552 21439 1 76 0.0024771 267 0 8.10985e+07 0.0274018 1.59644e+06 8.19921e+07 7.06124e+06 21454 4.02595e+07 0 0.151946 0.989101 0.81161 8.10985e+07 0.00368732 1.75989e+07 2.03779e+07 1.75108e+07 257 1.76e+07 9.62684e+06 0.00307927 1.7853e+07 50.3568 0.0194706 0.99391 0 49.8745 GTEX-12WSM-1326-SM-5GCP9 2 B1 2 pieces, marked tubular atrophy, diffuse, no Leydig hyperplasia noted. Rare foci of spermatogenesis but moderately-markedly autolyzed 6.1 Testis Testis 0000473 1002 901 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984449 376605 0.94082 0.989009 0.68358 32820 1 76 0.00233146 167 0 8.53026e+07 0.0588831 506248 8.62506e+07 7.1131e+06 32892 4.23303e+07 0 0.25724 0.989009 0.676067 8.53026e+07 0.00353084 1.8037e+07 1.02049e+07 1.81278e+07 169 1.82525e+07 1.24488e+07 0.00292839 1.82703e+07 50.0244 0.0058695 0.993569 0 50.1256 GTEX-12WSM-1426-SM-5GCPA 3 B1 3 pieces ~10% 'contaminant' mucosa, totally autolyzed 6.4 Colon Colon - Sigmoid 0001159 1010 893 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.987461 219241 0.968699 0.991286 0.826006 22379 1 76 0.00218728 271 0 8.91115e+07 0.0311346 1.75811e+06 8.98949e+07 7.08768e+06 22401 4.42805e+07 0 0.142692 0.991286 0.818809 8.91115e+07 0.00316487 1.90908e+07 9.42279e+06 1.90519e+07 273 1.90763e+07 1.21909e+07 0.00267419 1.93775e+07 50.3916 0.0195574 0.995111 0 49.949 GTEX-12WSM-1726-SM-5BC6J 1 B1 2 pieces, fibroadipose tissue only, no ductal elements 6.1 Breast Breast - Mammary Tissue 0008367 1014 889 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988581 190128 0.974974 0.992276 0.814624 21894 1 76 0.00282758 134 0 5.95830e+07 0.024744 295667 6.00468e+07 1.51532e+07 21911 2.96136e+07 0 0.160351 0.992276 0.808332 5.95830e+07 0.00504533 1.29821e+07 8.33626e+06 1.3096e+07 144 1.31144e+07 9.13643e+06 0.00393232 1.31722e+07 50.1101 0.00492394 0.995972 0 50.2184 GTEX-12WSM-1826-SM-5BC64 1 B1 2 pieces, ~80% glandular elements (delineated), good specimen 7.2 Salivary Gland Minor Salivary Gland 0006330 1019 884 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.981382 310914 0.975881 0.985016 0.808672 23119 1 76 0.00319155 223 0 7.95593e+07 0.0222801 145975 8.07695e+07 1.98925e+07 23145 3.94728e+07 0 0.16721 0.985016 0.796555 7.95593e+07 0.00555487 1.83662e+07 3.33129e+07 1.81614e+07 205 1.82685e+07 1.31823e+07 0.00436885 1.85395e+07 50.3682 0.0018073 0.988651 0 49.7198 GTEX-12WSM-1926-SM-5BC65 0 B1 6 pieces squamous epithelium is ~50 microns. Minimal dermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1023 880 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987622 289441 0.972854 0.991627 0.770693 23829 1 76 0.00278123 183 0 8.00033e+07 0.0268617 381296 8.06788e+07 2.04562e+07 23865 3.97299e+07 0 0.202161 0.991627 0.76424 8.00033e+07 0.00508094 1.74285e+07 1.05167e+07 1.76137e+07 179 1.76553e+07 1.26702e+07 0.00392644 1.76916e+07 50.0514 0.0047261 0.995631 0 50.2643 GTEX-12WSM-2126-SM-5GCOC 1 B1 2 pieces, no abnormalities noted 6.4 Brain Brain - Cerebellum 0002037 1106 797 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984598 260292 0.9472 0.989137 0.724597 22973 1 76 0.00250275 109 0 5.88272e+07 0.0525103 868099 5.94733e+07 5.05894e+06 22991 2.91998e+07 0 0.222604 0.989137 0.716726 5.88272e+07 0.0037191 1.26273e+07 1.05786e+07 1.27267e+07 134 1.27918e+07 6.64353e+06 0.00310813 1.28072e+07 50.0299 0.0145965 0.993676 0 50.1961 GTEX-12WSM-2226-SM-5DUVS 1 B1 1 piece, adhenohypophysis and focal dura (delineated) 6.8 Pituitary Pituitary 0000007 1108 795 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988047 434543 0.962445 0.991726 0.765993 25210 1 76 0.00196677 160 0 7.50697e+07 0.037264 558425 7.5696e+07 6.88323e+06 25243 3.73041e+07 0 0.196452 0.991726 0.759655 7.50697e+07 0.00315531 1.61049e+07 1.16136e+07 1.62618e+07 178 1.63243e+07 1.15642e+07 0.00255884 1.63026e+07 49.9667 0.0073772 0.995405 0 50.2423 GTEX-12WSN-0001-SM-664MG B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -22 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991452 780420 0.968504 0.992269 0.806023 21342 1 76 0.00229723 284 0 1.13645e+08 0.0309033 1.02999e+06 1.14531e+08 6.89311e+06 21386 5.65698e+07 0 0.162481 0.992269 0.799792 1.13645e+08 0.00299448 2.52911e+07 1.94727e+07 2.53856e+07 293 2.5355e+07 2.53922e+07 0.00264557 2.54265e+07 50.0704 0.00899316 0.993087 0 50.0932 GTEX-12WSN-0004-SM-5ANGE B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12WSN-0004-SM-5DWRZ B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12WSN-0004-SM-6WSBR B1 Blood Whole Blood 0013756 -22 BP-42123 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/09/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12WSN-0006-SM-5NQAP B1 8.3 Blood Whole Blood 0013756 -22 BP-42129 RNA isolation_PAXgene Blood RNA (Manual) 08/09/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987522 823876 0.951917 0.9906 0.762998 19389 1 76 0.00256195 128 0 8.56985e+07 0.0475483 178732 8.65117e+07 1.11956e+07 19407 4.26081e+07 0 0.188918 0.9906 0.755826 8.56985e+07 0.00562613 1.85278e+07 4.94362e+07 1.87324e+07 162 1.8801e+07 1.63407e+07 0.00408928 1.87266e+07 49.9009 0.00206599 0.993678 0 50.2745 GTEX-12WSN-0008-SM-664MI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 297 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993352 486249 0.977134 0.994158 0.860939 20709 1 76 0.00193755 287 0 1.05932e+08 0.0225624 245167 1.06554e+08 6.06299e+06 20733 5.2771e+07 0 0.116195 0.994158 0.855909 1.05932e+08 0.0028206 2.38531e+07 1.63052e+07 2.39042e+07 284 2.38722e+07 2.71348e+07 0.00237872 2.39796e+07 50.1123 0.00230086 0.994964 0 50.0535 GTEX-12WSN-0126-SM-5DUX5 0 B1 2 pieces 6.8 Spleen Spleen 0002106 148 741 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.982479 238935 0.96792 0.98576 0.803878 22546 1 76 0.00277785 132 0 6.17504e+07 0.0299106 284258 6.26425e+07 5.80525e+06 22566 3.06312e+07 0 0.164041 0.98576 0.792431 6.17504e+07 0.0039737 1.36271e+07 9.55702e+06 1.37588e+07 145 1.37997e+07 9.89204e+06 0.00337378 1.37791e+07 49.9627 0.00453779 0.989041 0 50.2404 GTEX-12WSN-0226-SM-5DUXH 0 B1 2 pieces; fibromuscular tissue with mesothelial lining 8.5 Heart Heart - Atrial Appendage 0006631 162 727 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.991145 219339 0.978533 0.994074 0.848491 20219 1 76 0.00166917 123 0 5.64137e+07 0.0209374 1.08754e+06 5.675e+07 5.04083e+06 20230 2.80637e+07 0 0.130042 0.994074 0.843463 5.64137e+07 0.00273464 1.20382e+07 9.63158e+06 1.19985e+07 143 1.19484e+07 1.00897e+07 0.00220033 1.2235e+07 50.5926 0.0191638 0.997003 0 49.9173 GTEX-12WSN-0326-SM-5GCP6 0 B1 6 pieces; no pathologic changes 5.9 Blood Vessel Artery - Aorta 0001496 166 723 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984659 213493 0.974447 0.989521 0.832049 21338 1 76 0.00200599 152 0 6.8574e+07 0.0252221 320865 6.93001e+07 5.92373e+06 21354 3.40261e+07 0 0.142398 0.989521 0.82333 6.8574e+07 0.00339885 1.49417e+07 5.85955e+06 1.49601e+07 166 1.49917e+07 1.24815e+07 0.002699 1.52293e+07 50.3931 0.00463008 0.994383 0 50.0307 GTEX-12WSN-0626-SM-5BC61 1 B1 2 pieces; distended alveolar spaces suggestive of emphysema 5.9 Lung Lung 0008952 185 704 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.987206 277871 0.973715 0.991582 0.829416 23115 1 76 0.00272304 146 0 6.8294e+07 0.0258123 234216 6.88738e+07 1.90425e+07 23135 3.39194e+07 0 0.144299 0.991582 0.822434 6.8294e+07 0.0050728 1.50549e+07 7.86043e+06 1.52432e+07 153 1.534e+07 1.33334e+07 0.00389273 1.52439e+07 49.843 0.00340066 0.995957 0 50.3108 GTEX-12WSN-0726-SM-5GCMS 1 B1 2 pieces; fibrosis represents about 30% of tissue; variably sized thyroid follicles 7.4 Thyroid Thyroid 0002046 193 696 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985391 232765 0.964426 0.990271 0.731393 23478 1 76 0.00207878 136 0 6.89376e+07 0.0353244 400911 6.96149e+07 5.50532e+06 23512 3.4216e+07 0 0.233033 0.990271 0.724277 6.89376e+07 0.00337789 1.4996e+07 6.70458e+06 1.50234e+07 152 1.50999e+07 9.9676e+06 0.00272513 1.52323e+07 50.2182 0.00575898 0.99515 0 50.0458 GTEX-12WSN-0826-SM-5GCOF 0 B1 2 pieces well trimmed; scattered well preserved Langerhans islands; <10% externall fat 6.8 Pancreas Pancreas 0001150 202 687 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.985911 269016 0.973522 0.990613 0.813206 22051 1 76 0.0022458 109 0 7.80405e+07 0.0263124 264965 7.878e+07 6.75762e+06 22071 3.87427e+07 0 0.160316 0.990613 0.805573 7.80405e+07 0.00369111 1.7757e+07 1.82498e+07 1.78294e+07 129 1.78447e+07 2.0416e+07 0.00296503 1.81066e+07 50.3641 0.00336335 0.995315 0 50.1017 GTEX-12WSN-0926-SM-5GCN1 2 B1 2 pieces; one piece 100% fibrovascular and adipose tissue; second piece 10% external fat and 20% focal fibrosis 6.6 Adrenal Gland Adrenal Gland 0002369 205 684 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985092 152386 0.979275 0.989648 0.809251 21207 1 76 0.00199091 267 0 6.88269e+07 0.0205875 3.29125e+06 6.95469e+07 5.6672e+06 21224 3.41943e+07 0 0.170023 0.989648 0.800874 6.88269e+07 0.00318342 1.50523e+07 2.45857e+07 1.49711e+07 258 1.47822e+07 5.8413e+06 0.00258442 1.55086e+07 51.1991 0.0473242 0.994204 0 49.8648 GTEX-12WSN-1326-SM-5GCNT 1 B1 2 pieces; fibrovascular tissue with ductal structures: gynecomastoid changes 6.9 Breast Breast - Mammary Tissue 0008367 246 643 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984535 153445 0.976281 0.989397 0.806643 21586 1 76 0.0020226 120 0 5.34917e+07 0.0234785 307350 5.40649e+07 4.72738e+06 21604 2.65573e+07 0 0.169637 0.989397 0.798091 5.34917e+07 0.00332273 1.18084e+07 5.92855e+06 1.18424e+07 133 1.18931e+07 8.46945e+06 0.00266947 1.20025e+07 50.2289 0.00568484 0.994259 0 50.0718 GTEX-12WSN-1426-SM-5GCO6 1 B1 6 pieces; 5-10% intradermal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 250 639 BP-44157 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.984969 227704 0.974076 0.989909 0.799599 23273 1 76 0.00200392 138 0 6.41434e+07 0.0256827 186716 6.47972e+07 5.82411e+06 23293 3.18341e+07 0 0.174477 0.989909 0.79153 6.41434e+07 0.00340098 1.41352e+07 6.42052e+06 1.42341e+07 150 1.43011e+07 1.14814e+07 0.00269896 1.43728e+07 50.1252 0.00288154 0.99485 0 50.1743 GTEX-12WSN-1826-SM-5LZUT 1 B1 5 pieces; well dissected except for some focal fat and fibrous tissue 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 266 623 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992035 213592 0.976547 0.993381 0.835116 22401 1 76 0.00229913 165 0 7.63621e+07 0.023163 527240 7.68709e+07 3.88898e+06 22418 3.80355e+07 0 0.141431 0.993381 0.829589 7.63621e+07 0.00296703 1.6667e+07 6.88084e+06 1.68088e+07 194 1.67983e+07 1.41616e+07 0.00263262 1.6774e+07 49.9638 0.00685877 0.994728 0 50.2117 GTEX-12WSN-2226-SM-5DUXT 1 B1 2 pieces; one piece fibroadipose tissue only; second piece salivary gland with attached squamous mucosa (outlined) and musculo- fibro-adipose tissue (outlined) 6.7 Salivary Gland Minor Salivary Gland 0006330 265 624 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.985191 225076 0.973623 0.987447 0.787683 22256 1 76 0.00206112 134 0 6.38907e+07 0.0252099 283809 6.47029e+07 5.48811e+06 22277 3.17729e+07 0 0.18594 0.987447 0.777796 6.38907e+07 0.00319232 1.45334e+07 1.47637e+07 1.45048e+07 161 1.44964e+07 9.17344e+06 0.00262543 1.46805e+07 50.3155 0.00438634 0.989703 0 49.9507 GTEX-12WSN-2326-SM-5DUVG 1 B1 6 pieces well trimmed; 60.63um thickness of the epidermis 8 Skin Skin - Sun Exposed (Lower leg) 0004264 290 599 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.989642 284941 0.972141 0.99249 0.821279 22145 1 76 0.00189018 140 0 6.12623e+07 0.0276183 366059 6.17259e+07 5.64054e+06 22164 3.04685e+07 0 0.150862 0.99249 0.815111 6.12623e+07 0.00312991 1.34827e+07 8.27454e+06 1.35611e+07 147 1.35794e+07 1.11441e+07 0.00250826 1.36352e+07 50.1024 0.0059304 0.995339 0 50.145 GTEX-12WSN-2526-SM-5LZU8 1 B1 2 pieces; <10% of internal fat in 1 piece 8 Muscle Muscle - Skeletal 0011907 299 590 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992706 220915 0.986448 0.993911 0.891194 18953 1 76 0.0020689 272 0 8.66336e+07 0.0132836 943997 8.71643e+07 4.07212e+06 18959 4.31762e+07 0 0.095254 0.993911 0.885768 8.66336e+07 0.00271682 1.88962e+07 9.74797e+06 1.90457e+07 264 1.90123e+07 1.8423e+07 0.00239247 1.90195e+07 50.0095 0.0108301 0.995117 0 50.197 GTEX-12WSN-2726-SM-5LZUK 1 B1 2 pieces, small intimal calcifications (outlined); no plaques 7.3 Blood Vessel Artery - Tibial 0007610 300 589 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988871 181964 0.978436 0.990165 0.864349 19874 1 76 0.00231803 144 0 6.80952e+07 0.0211845 345710 6.87715e+07 3.32439e+06 19882 3.38648e+07 0 0.114087 0.990165 0.855848 6.80952e+07 0.00313308 1.47696e+07 5.40437e+06 1.48172e+07 164 1.48028e+07 1.40306e+07 0.00272502 1.48732e+07 50.1186 0.00502693 0.99146 0 50.0804 GTEX-12WSN-5001-SM-7DHMK B1 8.3 Heart Heart - Left Ventricle 0006566 176 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992824 343197 0.977129 0.994097 0.858453 20191 1 76 0.00320996 194 0 7.68451e+07 0.0226232 1.79536e+06 7.73013e+07 5.73304e+06 20203 3.82945e+07 0 0.118677 0.994097 0.853386 7.68451e+07 0.00477215 1.67318e+07 1.88513e+07 1.68558e+07 239 1.682e+07 1.21883e+07 0.00399006 1.68414e+07 50.0318 0.0232255 0.995371 0 50.1847 GTEX-12WSN-5004-SM-793CE B1 7.9 Lung Lung 0008952 186 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99369 664756 0.968428 0.994885 0.826421 23309 1 76 0.00299843 173 0 7.59814e+07 0.0311471 254058 7.6372e+07 1.1264e+07 23331 3.78494e+07 0 0.142007 0.994885 0.822194 7.59814e+07 0.00341411 1.68154e+07 1.09632e+07 1.68224e+07 180 1.69113e+07 1.48702e+07 0.00320602 1.68178e+07 49.8613 0.00332658 0.99608 0 50.0103 GTEX-12WSN-5007-SM-7MGWH B1 5.7 Prostate Prostate 0002367 232 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.99049 371809 0.963775 0.993043 0.799062 23387 1 76 0.00267887 131 0 6.12302e+07 0.0360052 446030 6.16591e+07 4.96497e+06 23403 3.04661e+07 0 0.164714 0.993043 0.793502 6.12302e+07 0.00360634 1.34573e+07 9.00142e+06 1.35667e+07 144 1.36245e+07 1.01354e+07 0.00314141 1.35582e+07 49.8781 0.0072338 0.995596 0 50.2025 GTEX-12WSN-5013-SM-7P8P9 B1 7.7 Esophagus Esophagus - Mucosa 0006920 249 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991533 510517 0.976418 0.993074 0.884107 23037 1 76 0.00293744 283 0 9.93839e+07 0.0232076 540627 1.00077e+08 1.34582e+07 23050 4.95166e+07 0 0.0923106 0.993074 0.877983 9.93839e+07 0.00343702 2.20366e+07 2.08942e+07 2.23743e+07 269 2.23938e+07 2.34675e+07 0.00318685 2.21705e+07 49.7495 0.00540211 0.994615 0 50.3802 GTEX-12WSN-5016-SM-7DUGY B1 7.4 Esophagus Esophagus - Muscularis 0004648 255 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993451 659193 0.965758 0.994244 0.819348 22904 1 76 0.00258898 278 0 9.11205e+07 0.0339302 666658 9.1648e+07 8.13867e+06 22927 4.53974e+07 0 0.14641 0.994244 0.814632 9.11205e+07 0.00374408 1.96949e+07 1.667e+07 1.98545e+07 268 1.98653e+07 1.63947e+07 0.00316607 1.97589e+07 49.8657 0.00727411 0.995037 0 50.2018 GTEX-12WSN-5019-SM-79OM6 B1 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 292 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975296 383782 0.969412 0.979316 0.803268 22971 1 76 0.00503248 139 0 6.18724e+07 0.0303314 295794 6.31792e+07 1.44906e+07 22992 3.07785e+07 0 0.166144 0.979316 0.786653 6.18724e+07 0.00629219 1.35528e+07 1.05141e+07 1.35729e+07 133 1.36651e+07 1.1322e+07 0.00565975 1.37035e+07 50.0702 0.00468182 0.983335 0 50.037 GTEX-12WSN-5022-SM-7DHN6 B1 8.4 Muscle Muscle - Skeletal 0011907 297 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 EXCLUDE 0.992228 277715 0.978155 0.993539 0.86559 19509 1 76 0.00319068 209 0 8.21292e+07 0.0215796 775049 8.26632e+07 6.145e+06 19520 4.09198e+07 0 0.112565 0.993539 0.859998 8.21292e+07 0.00486863 1.76244e+07 1.19986e+07 1.78133e+07 208 1.78524e+07 1.68324e+07 0.00402855 1.7682e+07 49.7602 0.00937598 0.994851 0 50.2664 GTEX-12ZZW-0003-SM-5ANGB C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZW-0003-SM-5DWRO C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZW-0003-SM-6WSBT C1 Blood Whole Blood 0013756 976 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZW-0005-SM-5O9BY C1 7.2 Blood Whole Blood 0013756 976 BP-42407 RNA isolation_PAXgene Blood RNA (Manual) 08/16/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.951354 475030 0.98152 0.953535 0.800212 16776 1 76 0.00390148 107 0 1.08626e+08 0.0170054 176605 1.13919e+08 4.62492e+06 16777 5.40179e+07 0 0.181308 0.953535 0.76303 1.08626e+08 0.00509572 2.56108e+07 1.88834e+08 2.63699e+07 150 2.64007e+07 3.12757e+07 0.00449724 2.58407e+07 49.464 0.00155026 0.955716 0 50.7302 GTEX-12ZZW-0008-SM-5YY9L C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1091 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993942 465957 0.975209 0.994772 0.864883 19486 1 76 0.00221539 174 0 7.80345e+07 0.0244898 206992 7.84446e+07 3.34799e+06 19496 3.88985e+07 0 0.110326 0.994772 0.860361 7.80345e+07 0.0026636 1.74883e+07 1.35713e+07 1.7504e+07 166 1.75034e+07 2.06391e+07 0.00243931 1.75625e+07 50.0843 0.0026387 0.995602 0 50.0224 GTEX-12ZZW-0011-R10a-SM-AHZMP C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 982 ChIP-Seq GTEX-12ZZW-0011-R10b-SM-5HL9X C1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 982 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990699 604525 0.963076 0.993127 0.856219 22033 1 76 0.00245703 266 0 7.77075e+07 0.0366622 7.30151e+06 7.82453e+07 6.52417e+06 22042 3.86795e+07 0 0.106857 0.993127 0.850334 7.77075e+07 0.00344262 1.6868e+07 2.39486e+07 1.71361e+07 298 1.69054e+07 7.00032e+06 0.00294862 1.72596e+07 50.5184 0.0933157 0.995556 0 50.3941 GTEX-12ZZW-0011-R3a-SM-5DUWW C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 982 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986607 368149 0.968526 0.989387 0.838763 21004 1 76 0.00256572 193 0 6.83647e+07 0.0313325 7.95947e+06 6.90981e+07 5.97204e+06 21012 3.40182e+07 0 0.129763 0.989387 0.829861 6.83647e+07 0.00386904 1.50293e+07 2.75465e+07 1.48839e+07 254 1.46583e+07 3.82725e+06 0.00321555 1.54179e+07 51.2628 0.115191 0.992167 0 49.7569 GTEX-12ZZW-0011-R4a-SM-5DUX9 C1, A1 7 Brain Brain - Amygdala 0001876 982 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98808 359625 0.968424 0.991515 0.844134 20200 1 76 0.00243496 143 0 5.61436e+07 0.0313769 6.35503e+06 5.66241e+07 4.819e+06 20207 2.79032e+07 0 0.12429 0.991515 0.836971 5.61436e+07 0.00386676 1.23251e+07 2.02004e+07 1.21733e+07 173 1.19309e+07 4.51251e+06 0.00314838 1.27492e+07 51.658 0.112232 0.994951 0 49.6901 GTEX-12ZZW-0011-R5a-SM-5DUVN C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989856 503934 0.958106 0.992545 0.817023 21825 1 76 0.00240416 151 0 6.048e+07 0.041693 6.04172e+06 6.09343e+07 5.14495e+06 21837 3.0089e+07 0 0.141083 0.992545 0.810931 6.048e+07 0.00358507 1.30792e+07 2.34048e+07 1.30263e+07 177 1.28538e+07 5.17619e+06 0.00299302 1.34154e+07 51.069 0.0991514 0.995233 0 49.8986 GTEX-12ZZW-0011-R6a-SM-5DUVZ C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988085 343360 0.967059 0.990898 0.830974 21385 1 76 0.00255262 195 0 6.54932e+07 0.0327887 8.93681e+06 6.60948e+07 5.83572e+06 21396 3.25852e+07 0 0.136084 0.990898 0.82341 6.54932e+07 0.00376743 1.42993e+07 2.58552e+07 1.41278e+07 224 1.3974e+07 5.06015e+06 0.0031583 1.46245e+07 51.1373 0.135212 0.99371 0 49.6984 GTEX-12ZZW-0011-R7a-SM-5DUWC C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 982 BP-44020 RNA isolation_PAXgene Tissue miRNA 09/27/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987384 359884 0.965878 0.989898 0.836042 21448 1 76 0.00252727 197 0 6.49984e+07 0.0339497 8.37522e+06 6.56617e+07 5.76548e+06 21461 3.23508e+07 0 0.129836 0.989898 0.827597 6.49984e+07 0.00363306 1.42459e+07 2.32029e+07 1.40717e+07 226 1.38436e+07 5.25841e+06 0.00307877 1.46327e+07 51.3856 0.127551 0.992412 0 49.6923 GTEX-12ZZW-0126-SM-5DUVB 0 C1 6 pieces, focal adherent dermal fat up to ~1mm, delineated. Squamous epithelium is ~70-90 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 1090 946 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.98865 209189 0.968901 0.991 0.772871 24179 1 76 0.00201596 147 0 6.78283e+07 0.0308163 335040 6.84443e+07 5.79345e+06 24208 3.37511e+07 0 0.19603 0.991 0.765914 6.78283e+07 0.00305579 1.48687e+07 6.84279e+06 1.49982e+07 149 1.50125e+07 1.22535e+07 0.00253464 1.5005e+07 49.9876 0.00489507 0.99335 0 50.2167 GTEX-12ZZW-0426-SM-5GCO9 0 C1 2 pieces, nubbin of adherent fibroadipose tissue on one section, delineated; o/w good specimens 6.7 Blood Vessel Artery - Tibial 0007610 1101 936 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98426 275308 0.976096 0.989211 0.833359 22068 1 76 0.00196958 162 0 7.64763e+07 0.0235194 305106 7.73104e+07 6.07924e+06 22085 3.7915e+07 0 0.142736 0.989211 0.824368 7.64763e+07 0.00348859 1.64648e+07 6.95875e+06 1.65596e+07 173 1.66009e+07 1.60621e+07 0.00272528 1.67831e+07 50.2728 0.00394651 0.994163 0 50.1436 GTEX-12ZZW-0926-SM-5LZUD 1 C1 2 pieces, mild congestion 6.3 Lung Lung 0008952 1166 874 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990413 190758 0.97031 0.991416 0.787831 24011 1 76 0.00268419 161 0 7.52547e+07 0.0293655 314246 7.59064e+07 3.51003e+06 24047 3.74407e+07 0 0.182479 0.991416 0.781068 7.52547e+07 0.00335666 1.6519e+07 6.37095e+06 1.66376e+07 174 1.66228e+07 1.25999e+07 0.00302008 1.66089e+07 49.9792 0.00413992 0.992418 0 50.1789 GTEX-12ZZW-0926-SM-CYKRH 1 C1 2 pieces, mild congestion 6.3 Lung Lung 0008952 1166 874 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 RIP-Seq GTEX-12ZZW-1026-SM-5GCMM 1 C1 2 pieces, mild interstitial fibrosis/microinfarct delineated 5.9 Heart Heart - Left Ventricle 0006566 1169 871 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98406 147959 0.980503 0.989513 0.843684 20937 1 76 0.00266974 177 0 6.75382e+07 0.0193822 4.07343e+06 6.8254e+07 5.65888e+06 20948 3.34781e+07 0 0.136818 0.989513 0.834837 6.75382e+07 0.00427569 1.52287e+07 1.58944e+07 1.49891e+07 205 1.4959e+07 6.39895e+06 0.00346829 1.55868e+07 51.0277 0.0596805 0.994966 0 49.6035 GTEX-12ZZW-1726-SM-5DUVD 2 C1 7 pieces squamous mucosa sloughing, <5% thickness 5.9 Esophagus Esophagus - Mucosa 0006920 1182 862 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.983698 200663 0.97097 0.986908 0.821048 22054 1 76 0.00201236 139 0 5.95362e+07 0.0288501 719538 6.0326e+07 5.2217e+06 22072 2.95795e+07 0 0.149922 0.986908 0.810299 5.95362e+07 0.00340432 1.32712e+07 8.18849e+06 1.33541e+07 154 1.33333e+07 9.08559e+06 0.00270608 1.34828e+07 50.2787 0.0119275 0.990117 0 50.1556 GTEX-12ZZW-2326-SM-5DUW2 1 C1 2 pieces ~10% mesothelial hyperplasia 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1192 855 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986629 251762 0.975059 0.990448 0.746838 22848 1 76 0.00216432 121 0 5.41556e+07 0.0245014 270297 5.46778e+07 4.98308e+06 22873 2.68874e+07 0 0.228222 0.990448 0.739704 5.41556e+07 0.00343802 1.19359e+07 7.19368e+06 1.2046e+07 118 1.20961e+07 9.52546e+06 0.00279871 1.20857e+07 49.9785 0.00494345 0.994267 0 50.2294 GTEX-12ZZW-2426-SM-5DUWE 1 C1 6 pieces, muscularis, adherent fat/serosa up to ~1mm rep delineated 6.2 Colon Colon - Sigmoid 0001159 1195 853 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98706 264435 0.976598 0.990101 0.775821 22389 1 76 0.00208495 143 0 6.34024e+07 0.0230806 306768 6.40363e+07 6.2073e+06 22407 3.15125e+07 0 0.200777 0.990101 0.768141 6.34024e+07 0.00327559 1.38531e+07 7.49647e+06 1.39822e+07 144 1.4013e+07 1.0926e+07 0.00267844 1.40051e+07 49.986 0.00479053 0.993142 0 50.2319 GTEX-12ZZW-2926-SM-5LZUP 1 C1 4 pieces, no abnormalities noted 6.2 Brain Brain - Cortex 0001870 1224 826 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991098 346102 0.963964 0.992446 0.850415 22933 1 76 0.0027143 267 0 8.13843e+07 0.0357236 5.10715e+06 8.20038e+07 3.98901e+06 22941 4.05303e+07 0 0.11355 0.992446 0.84399 8.13843e+07 0.0034441 1.76851e+07 1.92478e+07 1.81663e+07 288 1.80638e+07 8.92199e+06 0.0030787 1.78706e+07 49.7312 0.0622795 0.993794 0 50.6711 GTEX-12ZZW-3026-SM-5LZW7 1 C1 1 piece, mainly neurohypophysis 6.3 Pituitary Pituitary 0000007 1225 826 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990194 262136 0.954395 0.991597 0.746991 24709 1 76 0.00264219 132 0 6.71849e+07 0.0453999 490542 6.77542e+07 3.44454e+06 24739 3.34402e+07 0 0.207405 0.991597 0.740713 6.71849e+07 0.00341272 1.44928e+07 1.11092e+07 1.46538e+07 147 1.46694e+07 9.9042e+06 0.00302691 1.45723e+07 49.8341 0.00724002 0.992999 0 50.2761 GTEX-12ZZX-0001-SM-5ANG4 C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZX-0001-SM-5DWRR C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZX-0001-SM-6WSBV C1 Blood Whole Blood 0013756 494 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZX-0005-SM-5O9A9 C1 7.5 Blood Whole Blood 0013756 494 BP-42484 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.972656 487674 0.975176 0.977618 0.778459 20325 1 76 0.00246613 126 0 8.80551e+07 0.0236318 314903 9.00711e+07 1.38799e+07 20341 4.36354e+07 0 0.196717 0.977618 0.761035 8.80551e+07 0.00469229 2.00954e+07 9.72147e+07 2.01442e+07 150 2.02175e+07 1.95282e+07 0.00357356 2.04815e+07 50.3244 0.00349616 0.98258 0 50.0607 GTEX-12ZZX-0008-SM-5YY9N C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 586 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993289 548993 0.973222 0.994195 0.836201 21761 1 76 0.00228923 290 0 1.05113e+08 0.026441 474335 1.05727e+08 4.85692e+06 21786 5.23905e+07 0 0.137021 0.994195 0.831347 1.05113e+08 0.00268113 2.34268e+07 1.80795e+07 2.35358e+07 270 2.35185e+07 2.64376e+07 0.002485 2.35491e+07 50.0325 0.00448641 0.9951 0 50.1161 GTEX-12ZZX-0011-R10a-SM-AHZMR C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 497 ChIP-Seq GTEX-12ZZX-0011-R10b-SM-5DUWK C1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989498 588013 0.959991 0.992305 0.831324 23503 1 76 0.00196424 199 0 7.71132e+07 0.0393467 2.18735e+06 7.77111e+07 7.4627e+06 23520 3.83505e+07 0 0.128668 0.992305 0.824927 7.71132e+07 0.00295892 1.68742e+07 1.41055e+07 1.6826e+07 243 1.6877e+07 1.14696e+07 0.00246018 1.70281e+07 50.2229 0.0281472 0.995111 0 49.9284 GTEX-12ZZX-0011-R11a-SM-5DUVJ C1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987513 535538 0.947604 0.990759 0.737631 23241 1 76 0.00216004 156 0 7.26392e+07 0.0517699 967531 7.33167e+07 7.17916e+06 23269 3.60897e+07 0 0.209973 0.990759 0.730815 7.26392e+07 0.0032894 1.56735e+07 1.15748e+07 1.57312e+07 168 1.58133e+07 1.02252e+07 0.00272287 1.58147e+07 50.0022 0.0131966 0.994005 0 50.0919 GTEX-12ZZX-0011-R1a-SM-5EQ6B C1, A1 8.5 Brain Brain - Hippocampus 0001954 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990978 893304 0.958424 0.993713 0.859224 23174 1 76 0.00201802 274 0 7.91262e+07 0.0411912 3.80410e+06 7.96268e+07 9.88793e+06 23192 3.93454e+07 0 0.0991997 0.993713 0.853822 7.91262e+07 0.00309272 1.73254e+07 2.03003e+07 1.74044e+07 267 1.73049e+07 1.06266e+07 0.00255389 1.76475e+07 50.4901 0.0477742 0.996448 0 50.1136 GTEX-12ZZX-0011-R2a-SM-5EGLG C1, A1 7.9 Brain Brain - Substantia nigra 0002038 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990844 545731 0.96663 0.993442 0.869856 21961 1 76 0.00198028 208 0 6.96474e+07 0.0330033 4.26623e+06 7.01072e+07 6.06259e+06 21972 3.46506e+07 0 0.0967733 0.993442 0.864152 6.96474e+07 0.00306226 1.53747e+07 1.70214e+07 1.54476e+07 221 1.53274e+07 9.67977e+06 0.00251985 1.56697e+07 50.5522 0.060853 0.996041 0 50.1182 GTEX-12ZZX-0011-R3b-SM-5EGLH C1, A1 8.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 497 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990015 707435 0.96007 0.992905 0.835523 23530 1 76 0.00203773 270 0 8.33761e+07 0.0395325 4.65121e+06 8.39719e+07 7.81264e+06 23545 4.14677e+07 0 0.124547 0.992905 0.829595 8.33761e+07 0.00309593 1.81781e+07 2.37824e+07 1.82637e+07 288 1.81698e+07 9.649e+06 0.00256529 1.84988e+07 50.4486 0.05539 0.995794 0 50.1175 GTEX-12ZZX-0011-R5a-SM-5HL89 C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 497 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990498 441199 0.967875 0.993509 0.841942 22862 1 76 0.00239768 267 0 8.40591e+07 0.0318962 6.41268e+06 8.46083e+07 8.02274e+06 22876 4.18253e+07 0 0.125933 0.993509 0.836477 8.40591e+07 0.00328289 1.82176e+07 2.6365e+07 1.86018e+07 294 1.84394e+07 7.21277e+06 0.00283894 1.86049e+07 50.2234 0.0757926 0.996521 0 50.5218 GTEX-12ZZX-0011-R6a-SM-5HL8L C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 497 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990285 638564 0.955415 0.993017 0.837544 23228 1 76 0.00222112 199 0 7.11489e+07 0.0442798 3.36772e+06 7.16493e+07 6.60694e+06 23245 3.53965e+07 0 0.117871 0.993017 0.831695 7.11489e+07 0.00318789 1.54932e+07 1.60982e+07 1.55396e+07 241 1.55044e+07 8.35413e+06 0.00270317 1.57108e+07 50.3307 0.0470029 0.995749 0 50.0748 GTEX-12ZZX-0011-R7b-SM-5DUVV C1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988746 559842 0.96161 0.991293 0.82141 22508 1 76 0.00222235 200 0 7.26087e+07 0.0380914 5.94331e+06 7.32464e+07 6.75137e+06 22518 3.61354e+07 0 0.1402 0.991293 0.814258 7.26087e+07 0.00327085 1.58956e+07 3.02566e+07 1.55885e+07 252 1.54982e+07 7.23914e+06 0.00274525 1.61696e+07 51.06 0.0811413 0.993841 0 49.5124 GTEX-12ZZX-0011-R8a-SM-5DUW8 C1, A1 8.1 Brain Brain - Hypothalamus 0001898 497 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988285 506820 0.956825 0.990842 0.822818 23569 1 76 0.00208046 156 0 6.36019e+07 0.042793 2.70085e+06 6.41898e+07 5.83059e+06 23588 3.16486e+07 0 0.134006 0.990842 0.815283 6.36019e+07 0.00314609 1.3953e+07 1.46184e+07 1.39433e+07 181 1.38971e+07 7.79365e+06 0.0026119 1.41583e+07 50.4655 0.0420761 0.993399 0 49.9826 GTEX-12ZZX-0126-SM-5EGK9 0 C1 6 pieces, squamous epithelium is ~60 microns; minimal dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 584 718 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989639 196243 0.976419 0.99259 0.834345 22627 1 76 0.00190115 201 0 6.39459e+07 0.0233023 403083 6.44233e+07 5.90291e+06 22645 3.18052e+07 0 0.142074 0.99259 0.828163 6.39459e+07 0.00303854 1.38378e+07 7.17354e+06 1.3928e+07 156 1.39669e+07 1.23239e+07 0.00246815 1.39752e+07 50.0149 0.00625679 0.995541 0 50.1624 GTEX-12ZZX-0226-SM-5DUXU 0 C1 2 pieces, ~10% fascial/vasuclar tissue; rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 587 716 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987405 246366 0.97599 0.989778 0.799507 22846 1 76 0.00199375 142 0 6.93759e+07 0.0236962 398393 7.00924e+07 6.17778e+06 22868 3.45196e+07 0 0.176483 0.989778 0.791334 6.93759e+07 0.00312075 1.52569e+07 6.2808e+06 1.5385e+07 162 1.53981e+07 1.21131e+07 0.0025559 1.54017e+07 50.0059 0.00568382 0.99215 0 50.209 GTEX-12ZZX-0326-SM-5DUVH 0 C1 2 pieces, minimal interstitial fat 7.7 Muscle Muscle - Skeletal 0011907 621 682 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990536 220444 0.983312 0.993393 0.877047 20136 1 76 0.00168901 127 0 6.81177e+07 0.0164065 600340 6.85708e+07 6.15958e+06 20145 3.38934e+07 0 0.106265 0.993393 0.871252 6.81177e+07 0.002825 1.46821e+07 7.27511e+06 1.46513e+07 153 1.46666e+07 1.54885e+07 0.00225538 1.48413e+07 50.2959 0.00875504 0.996249 0 49.9475 GTEX-12ZZX-0426-SM-5DUVT 0 C1 2 pieces incomplete rim of adherent fat ~0.5-1mm, delineated 7.1 Nerve Nerve - Tibial 0001323 627 677 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988133 192719 0.967045 0.991781 0.763901 23606 1 76 0.00198802 137 0 6.11717e+07 0.0326552 255025 6.16786e+07 6.04198e+06 23629 3.03997e+07 0 0.203144 0.991781 0.757623 6.11717e+07 0.00308628 1.33611e+07 5.80305e+06 1.34646e+07 137 1.35164e+07 1.02085e+07 0.00253513 1.35201e+07 50.0067 0.00413474 0.99543 0 50.1929 GTEX-12ZZX-0526-SM-5DUW6 0 C1 2 pieces, no fat or atherosis; good specimens 8.7 Blood Vessel Artery - Tibial 0007610 628 676 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987958 246039 0.976323 0.991543 0.84734 20912 1 76 0.00181693 143 0 6.29958e+07 0.0232024 402321 6.3533e+07 6.32496e+06 20925 3.13019e+07 0 0.128983 0.991543 0.840174 6.29958e+07 0.00295796 1.34467e+07 4.85795e+06 1.35687e+07 147 1.36023e+07 1.30301e+07 0.00238538 1.36261e+07 50.0438 0.00633247 0.995129 0 50.2259 GTEX-12ZZX-0626-SM-5EQ46 1 C1 2 pieces, no atherosis; adherent fat up to ~1mm, delineated 6.2 Blood Vessel Artery - Coronary 0001621 638 667 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989969 291433 0.980244 0.992706 0.782038 22395 1 76 0.00204116 162 0 7.54578e+07 0.0193576 500142 7.60122e+07 8.71726e+06 22418 3.74973e+07 0 0.198206 0.992706 0.776334 7.54578e+07 0.00326073 1.65421e+07 7.33721e+06 1.6755e+07 174 1.67526e+07 1.29173e+07 0.00264926 1.67482e+07 49.9933 0.00657976 0.995443 0 50.3197 GTEX-12ZZX-0726-SM-5EGKA 1 C1 2 pieces, adherent/interstitial fat is ~40% of specimens 7.1 Heart Heart - Atrial Appendage 0006631 640 666 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990833 227590 0.978473 0.993392 0.807142 21757 1 76 0.00193561 149 0 6.96701e+07 0.021227 1.80109e+06 7.01335e+07 6.12343e+06 21772 3.46602e+07 0 0.171331 0.993392 0.801808 6.96701e+07 0.00306537 1.52846e+07 9.39915e+06 1.52392e+07 172 1.52586e+07 1.06753e+07 0.00249903 1.54189e+07 50.2612 0.0256809 0.995951 0 49.9257 GTEX-12ZZX-1026-SM-5LZUW 1 C1 6 pieces, mild atherosis 6.8 Blood Vessel Artery - Aorta 0001496 647 661 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989868 448231 0.961932 0.991266 0.787654 21425 1 76 0.00260464 132 0 6.15322e+07 0.0376135 195435 6.20744e+07 3.10139e+06 21438 3.05794e+07 0 0.174278 0.991266 0.780774 6.15322e+07 0.003428 1.31666e+07 1.30423e+07 1.32451e+07 138 1.32594e+07 1.1108e+07 0.00301574 1.32458e+07 49.9744 0.0031484 0.992665 0 50.1485 GTEX-12ZZX-1126-SM-5EGKB 1 C1 2 pieces, well-defined TDLUs, rep delineated 7.5 Breast Breast - Mammary Tissue 0008367 651 657 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989714 223889 0.967868 0.992119 0.739417 24540 1 76 0.00214878 142 0 6.80004e+07 0.0314179 455016 6.85405e+07 6.17965e+06 24571 3.38073e+07 0 0.228451 0.992119 0.73359 6.80004e+07 0.00312164 1.49451e+07 7.28702e+06 1.50488e+07 146 1.50669e+07 1.12168e+07 0.00263403 1.50819e+07 50.0248 0.00663864 0.994525 0 50.1728 GTEX-12ZZX-1226-SM-5EGHS 1 C1 2 pieces, lymphoid aggregates (delineated) and regressive changes suggest Hashimoto/autoimmune thyroiditis. Possible poorly preserved parathyroid ensquared 6.5 Thyroid Thyroid 0002046 656 653 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979201 200016 0.967654 0.984043 0.76276 23976 1 76 0.00300896 116 0 5.84093e+07 0.0306703 411976 5.93565e+07 8.64294e+06 23996 2.89346e+07 0 0.204894 0.984043 0.750588 5.84093e+07 0.00625908 1.28366e+07 9.33078e+06 1.29166e+07 126 1.3016e+07 8.85912e+06 0.00462603 1.30071e+07 49.9828 0.00694071 0.988885 0 50.1553 GTEX-12ZZX-1326-SM-5DUWI 1 C1 6 pieces, squamous mucosa up to ~0.3mm thick 9.4 Esophagus Esophagus - Mucosa 0006920 662 648 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990467 249884 0.980351 0.992794 0.775656 21491 1 76 0.00200491 133 0 7.00046e+07 0.0193644 473783 7.05127e+07 6.25114e+06 21511 3.48461e+07 0 0.204695 0.992794 0.770066 7.00046e+07 0.00308772 1.58082e+07 9.03999e+06 1.59226e+07 153 1.59727e+07 1.30435e+07 0.00254505 1.59158e+07 49.9108 0.00671912 0.995121 0 50.1802 GTEX-12ZZX-1726-SM-5BC63 1 C1 2 pieces, minimal vascular tissue/mesothelial hyperplasia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 670 643 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985383 297224 0.972398 0.989666 0.801312 22495 1 76 0.00281761 131 0 6.0791e+07 0.0272694 1.0679e+06 6.14258e+07 1.65426e+07 22518 3.01555e+07 0 0.171085 0.989666 0.793031 6.0791e+07 0.00533276 1.32386e+07 1.0086e+07 1.34231e+07 146 1.34664e+07 9.89355e+06 0.00406974 1.34501e+07 49.9697 0.0173851 0.993948 0 50.3462 GTEX-12ZZX-1926-SM-5EGKC 1 C1 6 pieces, squamous mucosa up to ~0.2mm 5.8 Vagina Vagina 0000996 677 637 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989155 239915 0.970836 0.99165 0.752536 23661 1 76 0.00202241 167 0 7.79707e+07 0.0288394 438666 7.86272e+07 6.4794e+06 23701 3.87587e+07 0 0.2183 0.99165 0.746253 7.79707e+07 0.00317386 1.70602e+07 7.3487e+06 1.72124e+07 175 1.72065e+07 1.27948e+07 0.00259669 1.72558e+07 50.0716 0.00557906 0.994146 0 50.2221 GTEX-12ZZX-2026-SM-5LZV9 1 C1 2 pieces, no abnormalities 6 Ovary Ovary 0000992 679 637 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990634 175715 0.966426 0.991805 0.738839 23054 1 76 0.00255557 144 0 7.07069e+07 0.0333331 236409 7.12912e+07 3.56908e+06 23090 3.5191e+07 0 0.227587 0.991805 0.732784 7.07069e+07 0.00323031 1.54781e+07 8.17186e+06 1.55539e+07 148 1.55612e+07 1.26546e+07 0.00289254 1.55569e+07 49.9931 0.0033161 0.992975 0 50.122 GTEX-12ZZX-2126-SM-5LZVL 1 C1 2 pieces, myometrium only, no endometrium noted 6.4 Uterus Uterus 0000995 683 634 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989113 202406 0.965884 0.990231 0.763874 22716 1 76 0.00277393 133 0 6.51685e+07 0.033845 179647 6.58114e+07 3.58896e+06 22741 3.2381e+07 0 0.20201 0.990231 0.756412 6.51685e+07 0.00355099 1.42284e+07 5.55785e+06 1.42746e+07 147 1.42782e+07 1.04558e+07 0.00316202 1.43017e+07 50.0411 0.00272972 0.991349 0 50.0809 GTEX-12ZZX-2426-SM-5GCOE 0 C1 6 pieces, squamous epithelium is ~50-70 microns 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 691 627 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985725 166907 0.976991 0.990079 0.817196 21941 1 76 0.00221264 151 0 5.60685e+07 0.0227469 334420 5.66303e+07 4.69324e+06 21960 2.78488e+07 0 0.159795 0.990079 0.809088 5.60685e+07 0.00342212 1.22468e+07 6.57681e+06 1.2271e+07 133 1.2342e+07 1.01465e+07 0.00281472 1.24068e+07 50.131 0.00590531 0.994432 0 50.0493 GTEX-12ZZX-2726-SM-5N9FT 1 C1 6 pieces, all muscularis 5.7 Colon Colon - Sigmoid 0001159 702 619 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987293 319095 0.966752 0.988566 0.817539 24019 1 76 0.00409082 275 0 1.09247e+08 0.0330496 3.02843e+06 1.1051e+08 5.84522e+06 24044 5.4275e+07 0 0.149213 0.988566 0.808191 1.09247e+08 0.00420033 2.33575e+07 1.13456e+07 2.36166e+07 330 2.34957e+07 1.4761e+07 0.00414551 2.36126e+07 50.1241 0.027404 0.989839 0 50.2758 GTEX-12ZZX-2826-SM-5BC6K 1 C1 4 pieces, no abnormalities 7.3 Brain Brain - Cerebellum 0002037 709 612 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98785 431644 0.946998 0.991256 0.699866 23966 1 76 0.00300512 157 0 8.11086e+07 0.052625 1.16213e+06 8.18241e+07 2.10654e+07 23999 4.02896e+07 0 0.247132 0.991256 0.693746 8.11086e+07 0.0050176 1.74359e+07 1.16546e+07 1.76479e+07 177 1.77223e+07 9.46567e+06 0.0040079 1.76159e+07 49.8494 0.0142028 0.994663 0 50.3021 GTEX-12ZZX-2926-SM-5GCOQ 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 712 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985258 317346 0.961279 0.990235 0.829524 23143 1 76 0.00223067 153 0 6.82504e+07 0.0382752 2.32328e+06 6.89234e+07 6.32852e+06 23156 3.38731e+07 0 0.131755 0.990235 0.821424 6.82504e+07 0.00347772 1.49047e+07 1.33994e+07 1.49817e+07 200 1.50539e+07 8.99748e+06 0.00285106 1.51417e+07 50.1453 0.0337081 0.995213 0 50.1289 GTEX-12ZZX-2926-SM-CYKV2 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 712 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 RIP-Seq GTEX-12ZZX-3026-SM-5GCP3 1 C1 1 piece, prominent adenohypophysis, 4mm neurohypophysis (delineated) 7.5 Pituitary Pituitary 0000007 713 610 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985292 208560 0.97086 0.98993 0.805059 24275 1 76 0.00219671 138 0 6.13363e+07 0.0287831 711301 6.19602e+07 5.39479e+06 24301 3.04507e+07 0 0.165801 0.98993 0.796952 6.13363e+07 0.00335624 1.35866e+07 7.62042e+06 1.36528e+07 148 1.37407e+07 1.00936e+07 0.00277376 1.37700e+07 50.0533 0.01148 0.994569 0 50.1214 GTEX-12ZZY-0004-SM-5ANFV C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZY-0004-SM-5DWRV C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZY-0004-SM-6WSCC C1 Blood Whole Blood 0013756 355 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZY-0008-SM-5YY9Q C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 511 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993281 522304 0.974528 0.994299 0.861956 20238 1 76 0.00219754 222 0 9.15945e+07 0.025168 183315 9.21196e+07 4.00852e+06 20252 4.56539e+07 0 0.112571 0.994299 0.857042 9.15945e+07 0.00271045 2.04904e+07 1.66838e+07 2.06175e+07 219 2.06327e+07 2.43827e+07 0.00245373 2.05776e+07 49.9331 0.00198997 0.995318 0 50.1546 GTEX-12ZZY-0011-R10b-SM-5HL7W C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 388 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.98976 1.03827e+06 0.954345 0.993258 0.87371 22434 1 76 0.00175977 270 0 8.08593e+07 0.0451724 2.85679e+06 8.14082e+07 7.16495e+06 22442 4.01971e+07 0 0.0806346 0.993258 0.86782 8.08593e+07 0.00288038 1.75021e+07 2.54828e+07 1.76543e+07 298 1.76648e+07 1.14326e+07 0.0023181 1.77605e+07 50.1351 0.0350921 0.996756 0 50.2165 GTEX-12ZZY-0011-R5a-SM-5EGL9 C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988804 669132 0.961815 0.9921 0.828929 23862 1 76 0.00172846 268 0 8.38212e+07 0.0377588 3.75128e+06 8.44887e+07 7.84067e+06 23876 4.16694e+07 0 0.132886 0.9921 0.822381 8.38212e+07 0.00278343 1.82403e+07 2.41339e+07 1.83565e+07 278 1.83607e+07 1.04299e+07 0.0022542 1.84915e+07 50.1775 0.0443998 0.995396 0 50.1588 GTEX-12ZZY-0011-R6b-SM-5EGLA C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989328 677933 0.958152 0.99227 0.812276 24264 1 76 0.00179614 269 0 8.57336e+07 0.0414098 3.95307e+06 8.64015e+07 7.88267e+06 24284 4.26334e+07 0 0.145876 0.99227 0.805997 8.57336e+07 0.00281883 1.87242e+07 2.38244e+07 1.85565e+07 273 1.8628e+07 1.07941e+07 0.00230597 1.88856e+07 50.3433 0.0457524 0.995213 0 49.7751 GTEX-12ZZY-0011-R7a-SM-5EGLB C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 388 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989311 633958 0.959327 0.992576 0.8238 23278 1 76 0.00172712 199 0 7.36795e+07 0.0402888 3.39848e+06 7.42306e+07 6.36264e+06 23300 3.66216e+07 0 0.135527 0.992576 0.817684 7.36795e+07 0.00286944 1.61089e+07 2.05874e+07 1.60283e+07 249 1.60385e+07 8.77591e+06 0.0022964 1.63271e+07 50.4459 0.0457827 0.995841 0 49.8747 GTEX-12ZZY-0126-SM-5LZV2 2 C1 2 pieces, spermatogenesis appears reduced 7.1 Testis Testis 0000473 494 841 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991124 240898 0.925577 0.992177 0.725243 33100 1 76 0.00244464 153 0 7.62754e+07 0.0740571 484000 7.68769e+07 3.77475e+06 33154 3.79903e+07 0 0.200334 0.992177 0.719569 7.62754e+07 0.00304073 1.57317e+07 9.86262e+06 1.58132e+07 151 1.58457e+07 1.30218e+07 0.00274237 1.57734e+07 49.8857 0.00629578 0.993229 0 50.1291 GTEX-12ZZY-0226-SM-5LZVE 0 C1 6 pieces, minimal dermal fat; squamous epithelium is 30-50 microns 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 510 826 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992294 241158 0.973267 0.993434 0.825043 23871 1 76 0.00236794 215 0 8.10728e+07 0.0264166 304980 8.16086e+07 3.90568e+06 23893 4.03688e+07 0 0.148225 0.993434 0.819626 8.10728e+07 0.00305484 1.75558e+07 8.46009e+06 1.76643e+07 197 1.76797e+07 1.56748e+07 0.00271099 1.76308e+07 49.9308 0.00373711 0.994574 0 50.154 GTEX-12ZZY-0326-SM-5LZVQ 0 C1 2 pieces,j ~10% fibrofascial tissue, delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 513 824 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990869 227428 0.975196 0.992323 0.798314 23282 1 76 0.00239825 171 0 7.7694e+07 0.0245098 404176 7.82951e+07 3.9636e+06 23310 3.86812e+07 0 0.176882 0.992323 0.792186 7.7694e+07 0.00306457 1.71038e+07 7.14914e+06 1.72899e+07 190 1.72962e+07 1.31658e+07 0.00273092 1.72047e+07 49.8674 0.00516221 0.993777 0 50.2705 GTEX-12ZZY-0426-SM-5LZW3 0 C1 2 pieces, clean specimens, focal adherent nubbin of fat ~0.5mm delineated 6.7 Nerve Nerve - Tibial 0001323 524 814 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990312 200308 0.969134 0.991639 0.752344 24068 1 76 0.00252774 162 0 7.4615e+07 0.0305501 294064 7.52441e+07 3.65348e+06 24102 3.71309e+07 0 0.21679 0.991639 0.746053 7.4615e+07 0.00322095 1.63968e+07 6.55899e+06 1.64955e+07 165 1.65051e+07 1.18179e+07 0.00287388 1.64812e+07 49.9637 0.00390813 0.992965 0 50.15 GTEX-12ZZY-0526-SM-5EQ5H 0 C1 2 pieces, rep foci of Monckeberg's medial sclerosis delineated; minimal atherosis. 7 Blood Vessel Artery - Tibial 0007610 526 814 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991559 211134 0.976046 0.993784 0.830393 21552 1 76 0.00190376 143 0 6.44739e+07 0.0235365 204230 6.48771e+07 7.66177e+06 21567 3.20856e+07 0 0.145652 0.993784 0.825231 6.44739e+07 0.00298626 1.39734e+07 4.95484e+06 1.41211e+07 149 1.41267e+07 1.27097e+07 0.0024438 1.41056e+07 49.9625 0.00314795 0.996008 0 50.2629 GTEX-12ZZY-0626-SM-5EQ5T 0 C1 2 pieces, only trace interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 539 801 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989815 240136 0.983142 0.993191 0.87304 19048 1 76 0.00163633 123 0 6.29071e+07 0.0166249 634450 6.33384e+07 8.57331e+06 19056 3.12868e+07 0 0.110103 0.993191 0.867095 6.29071e+07 0.00268196 1.35822e+07 6.44489e+06 1.3629e+07 142 1.36688e+07 1.40766e+07 0.00215737 1.37413e+07 50.1324 0.0100168 0.996567 0 50.0862 GTEX-12ZZY-0726-SM-5EQ66 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50-80 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 542 799 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990247 298731 0.972985 0.992828 0.770165 22673 1 76 0.00203703 154 0 6.01522e+07 0.0267688 373939 6.05868e+07 7.56481e+06 22690 2.99234e+07 0 0.20282 0.992828 0.764642 6.01522e+07 0.00294797 1.31462e+07 8.0004e+06 1.32199e+07 140 1.32465e+07 9.89413e+06 0.00249131 1.32693e+07 50.043 0.00617196 0.99541 0 50.1398 GTEX-12ZZY-0826-SM-5EQMT 1 C1 2 piecesm features of goiter; prominent regressive changes/scarring 6 Thyroid Thyroid 0002046 553 789 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.988266 309515 0.967117 0.991428 0.729671 24342 1 76 0.00217754 133 0 6.63998e+07 0.0324789 269311 6.69739e+07 8.798e+06 24377 3.29976e+07 0 0.237446 0.991428 0.723416 6.63998e+07 0.00339298 1.45362e+07 6.70805e+06 1.46042e+07 144 1.46433e+07 1.03633e+07 0.00278332 1.46962e+07 50.0902 0.00402113 0.99459 0 50.1167 GTEX-12ZZY-0926-SM-5EQ6I 1 C1 2 pieces, minimal-mild congestion 6.8 Lung Lung 0008952 555 790 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.987126 415776 0.966273 0.99084 0.731637 24834 1 76 0.00234515 137 0 6.98156e+07 0.0333367 179853 7.04611e+07 8.85814e+06 24868 3.46523e+07 0 0.234636 0.99084 0.724935 6.98156e+07 0.00351793 1.52868e+07 8.07202e+06 1.54308e+07 152 1.54863e+07 1.04609e+07 0.00292935 1.54792e+07 49.9885 0.00255252 0.994553 0 50.2345 GTEX-12ZZY-1126-SM-5DUWQ 1 C1 2 pieces, minimal interstitial fibrosis 6.2 Heart Heart - Left Ventricle 0006566 563 783 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.9843 202681 0.983024 0.987837 0.834812 19593 1 76 0.00159786 263 0 7.03984e+07 0.016906 5.31978e+06 7.12653e+07 6.87796e+06 19598 3.50128e+07 0 0.148212 0.987837 0.824658 7.03984e+07 0.00281296 1.55795e+07 3.39385e+07 1.52708e+07 280 1.51802e+07 4.67073e+06 0.00220324 1.58879e+07 51.139 0.0746476 0.991373 0 49.4997 GTEX-12ZZY-1226-SM-5GCNK 1 C1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 565 782 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984844 243916 0.979126 0.990112 0.823592 22487 1 76 0.00189702 198 0 7.73566e+07 0.0206576 2.89726e+06 7.81292e+07 7.14633e+06 22503 3.83879e+07 0 0.155533 0.990112 0.815449 7.73566e+07 0.00315768 1.67515e+07 1.39021e+07 1.6572e+07 244 1.66637e+07 1.13106e+07 0.00252399 1.70163e+07 50.5235 0.0370829 0.99538 0 49.7306 GTEX-12ZZY-1326-SM-5GCNW 1 C1 6 pieces, atherosis of up to ~0.5mm 7.3 Blood Vessel Artery - Aorta 0001496 566 782 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.980765 226013 0.975106 0.985371 0.812565 22690 1 76 0.00218119 171 0 8.14714e+07 0.0244904 194519 8.2681e+07 6.65765e+06 22707 4.03835e+07 0 0.162541 0.985371 0.800678 8.14714e+07 0.00363729 1.7468e+07 7.19172e+06 1.75932e+07 188 1.76154e+07 1.53317e+07 0.00290584 1.78063e+07 50.2695 0.00235265 0.989976 0 50.1785 GTEX-12ZZY-1426-SM-5N9EI 1 C1 6 pieces, squamous mucosa up to ~0.4mm, ~20% thickness. Submucosa mucus glands noted, rep delineated 5.7 Esophagus Esophagus - Mucosa 0006920 568 781 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989327 331613 0.974106 0.99051 0.827218 23197 1 76 0.00384767 371 0 1.11754e+08 0.0255985 1.29598e+06 1.12824e+08 5.41514e+06 23219 5.55517e+07 0 0.146888 0.99051 0.819368 1.11754e+08 0.00400879 2.49795e+07 1.39457e+07 2.51434e+07 343 2.50511e+07 1.63087e+07 0.00392813 2.52067e+07 50.1548 0.0114867 0.991693 0 50.1635 GTEX-12ZZY-1526-SM-5LZWF 1 C1 6 pieces, all muscularis, good specimens 5.8 Esophagus Esophagus - Muscularis 0004648 569 781 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990807 250410 0.970633 0.991868 0.802826 23039 1 76 0.00239506 202 0 7.81838e+07 0.0291841 2.10416e+06 7.88248e+07 3.76482e+06 23064 3.88859e+07 0 0.167806 0.991868 0.796298 7.81838e+07 0.00317065 1.7023e+07 8.16577e+06 1.72194e+07 224 1.71408e+07 9.67439e+06 0.00278244 1.71796e+07 50.0564 0.0266942 0.99293 0 50.2869 GTEX-12ZZY-2726-SM-5EQ45 1 C1 6 pieces, all muscularis, trace adherent fat 5.7 Colon Colon - Sigmoid 0001159 605 756 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990119 246089 0.968795 0.992718 0.823209 23556 1 76 0.0019375 207 0 7.96739e+07 0.0309629 1.41751e+06 8.02584e+07 1.04133e+07 23577 3.96167e+07 0 0.145586 0.992718 0.817215 7.96739e+07 0.00305878 1.70175e+07 8.85276e+06 1.72106e+07 221 1.71627e+07 1.24998e+07 0.00249667 1.72659e+07 50.1498 0.0176619 0.995317 0 50.282 GTEX-12ZZY-2926-SM-5DUXO 1 C1 4 pieces (fragmented)--no abnormalities. Purkinje cells well visualized, rep delineated 6.5 Brain Brain - Cerebellum 0002037 610 753 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987075 425468 0.946467 0.989993 0.706533 23523 1 76 0.00224312 127 0 7.27987e+07 0.0531644 831539 7.35346e+07 6.93096e+06 23549 3.61802e+07 0 0.239934 0.989993 0.699463 7.27987e+07 0.00337505 1.57095e+07 1.21937e+07 1.58083e+07 162 1.58787e+07 9.39372e+06 0.00280742 1.58334e+07 49.9286 0.0113081 0.992911 0 50.1567 GTEX-12ZZY-3026-SM-5GCOU 1 C1 4 pieces, no abnormalities 6.7 Brain Brain - Cortex 0001870 614 750 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984689 291731 0.96282 0.989487 0.801645 23830 1 76 0.00210515 201 0 6.94647e+07 0.0368342 1.91984e+06 7.02028e+07 6.24098e+06 23851 3.4481e+07 0 0.161175 0.989487 0.793218 6.94647e+07 0.00328871 1.52227e+07 1.00392e+07 1.52478e+07 206 1.52983e+07 8.88989e+06 0.00269406 1.54797e+07 50.2948 0.0273471 0.994285 0 50.0411 GTEX-12ZZY-3126-SM-5DUX3 1 C1 1 piece, mainly adenohypophysis; 2.5x1mm nubbin of neurohypophysis delineated. 7.1 Pituitary Pituitary 0000007 614 750 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987983 304628 0.959918 0.991522 0.776112 24164 1 76 0.00197177 127 0 6.12174e+07 0.0397203 228653 6.17409e+07 5.71316e+06 24189 3.04284e+07 0 0.183806 0.991522 0.769532 6.12174e+07 0.00317812 1.29548e+07 9.49624e+06 1.30416e+07 139 1.31141e+07 1.00921e+07 0.00257279 1.30835e+07 49.9416 0.00370343 0.995061 0 50.1669 GTEX-12ZZZ-0002-SM-5ANGD B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-12ZZZ-0002-SM-5DWRU B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-12ZZZ-0002-SM-6WSCB B1 Blood Whole Blood 0013756 610 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-12ZZZ-0008-SM-5YY9S B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 821 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993319 517959 0.976502 0.994439 0.856045 20830 1 76 0.00224333 286 0 1.03981e+08 0.023213 397934 1.04563e+08 4.6312e+06 20853 5.18132e+07 0 0.120457 0.994439 0.851285 1.03981e+08 0.00274545 2.3345e+07 1.61088e+07 2.34703e+07 271 2.34824e+07 2.72277e+07 0.0024941 2.34588e+07 49.9749 0.00380569 0.995559 0 50.1337 GTEX-12ZZZ-0011-R10a-SM-5P9HC B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 640 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991848 1.02943e+06 0.959421 0.992341 0.847804 24002 1 76 0.00273664 372 0 1.17635e+08 0.0401274 4.82232e+06 1.18543e+08 3.84492e+06 24027 5.85791e+07 0 0.111617 0.992341 0.841311 1.17635e+08 0.00336154 2.54382e+07 3.64185e+07 2.57614e+07 352 2.55929e+07 1.43024e+07 0.00304894 2.56773e+07 50.0824 0.04068 0.992833 0 50.3156 GTEX-12ZZZ-0011-R10a-SM-AHZ6M B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 640 ChIP-Seq GTEX-12ZZZ-0011-R11a-SM-5EGLC B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 640 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989709 1.64587e+06 0.946955 0.992367 0.776079 25920 1 76 0.00194177 378 0 1.75584e+08 0.0523839 3.10579e+06 1.76934e+08 1.63601e+07 25967 8.72939e+07 0 0.170876 0.992367 0.770155 1.75584e+08 0.00284415 3.77787e+07 4.25176e+07 3.8049e+07 352 3.8149e+07 2.59316e+07 0.00239175 3.81296e+07 49.9873 0.0175534 0.995025 0 50.1782 GTEX-12ZZZ-0011-R3b-SM-5DUXK B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 640 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989339 598131 0.964498 0.992024 0.842492 22854 1 76 0.00178113 269 0 7.79830e+07 0.0351525 5.15710e+06 7.861e+07 6.49351e+06 22868 3.87957e+07 0 0.122006 0.992024 0.835773 7.79830e+07 0.00292016 1.70822e+07 2.54354e+07 1.6992e+07 288 1.68646e+07 8.54856e+06 0.0023491 1.73953e+07 50.7745 0.0656036 0.994709 0 49.8677 GTEX-12ZZZ-0011-R4b-SM-5DUV7 B1, A1 6.1 Brain Brain - Amygdala 0001876 640 BP-43982 RNA isolation_PAXgene Tissue miRNA 09/26/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98557 365238 0.970535 0.98951 0.846201 20742 1 76 0.00181648 268 0 6.82199e+07 0.0293271 7.70131e+06 6.89431e+07 6.28669e+06 20751 3.3894e+07 0 0.124334 0.98951 0.837325 6.82199e+07 0.00331492 1.48646e+07 2.56287e+07 1.4959e+07 288 1.46153e+07 4.39181e+06 0.00256272 1.54302e+07 51.3561 0.111705 0.99345 0 50.1582 GTEX-12ZZZ-0011-R5a-SM-5EQ4M B1, A1 9 Brain Brain - Caudate (basal ganglia) 0001873 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989518 621768 0.957009 0.992848 0.820181 23718 1 76 0.00190474 268 0 7.66766e+07 0.0426195 3.11034e+06 7.7229e+07 1.02764e+07 23735 3.81228e+07 0 0.136828 0.992848 0.814315 7.66766e+07 0.00294373 1.66745e+07 2.42048e+07 1.66375e+07 264 1.66363e+07 9.03096e+06 0.0024225 1.69226e+07 50.4265 0.0402743 0.996177 0 49.9445 GTEX-12ZZZ-0011-R6b-SM-5EQ5B B1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991901 584799 0.960175 0.994067 0.830801 22993 1 76 0.00184887 269 0 8.11536e+07 0.0395207 5.83582e+06 8.1638e+07 9.47487e+06 23007 4.04061e+07 0 0.129374 0.994067 0.825872 8.11536e+07 0.00284336 1.7671e+07 3.18004e+07 1.75653e+07 292 1.7468e+07 8.52875e+06 0.00234503 1.79446e+07 50.673 0.0714842 0.996234 0 49.8501 GTEX-12ZZZ-0011-R7b-SM-5EGLE B1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 640 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988631 659336 0.961193 0.991377 0.82358 23212 1 76 0.00175966 269 0 8.71828e+07 0.0385453 6.00758e+06 8.7941e+07 7.0193e+06 23226 4.33646e+07 0 0.137613 0.991377 0.816478 8.71828e+07 0.00282624 1.87968e+07 3.7089e+07 1.88073e+07 312 1.87135e+07 8.65067e+06 0.00229147 1.91035e+07 50.5157 0.0683137 0.994124 0 50.014 GTEX-12ZZZ-0226-SM-59HKU 1 B1 2 pieces; 20% and 10% internal fat 6.6 Muscle Muscle - Skeletal 0011907 814 1071 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.984872 208051 0.977323 0.990069 0.848836 20180 1 76 0.00226318 109 0 5.70531e+07 0.0224986 634111 5.76254e+07 1.03325e+07 20189 2.83209e+07 0 0.128487 0.990069 0.840406 5.70531e+07 0.00830088 1.24403e+07 6.35702e+06 1.24376e+07 122 1.25417e+07 1.17874e+07 0.00526618 1.26048e+07 50.1255 0.011004 0.995266 0 49.9945 GTEX-12ZZZ-0526-SM-5DUX6 1 B1 2 pieces; several central empty spaces 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 819 1066 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988306 226979 0.976094 0.991752 0.798043 21872 1 76 0.00188156 129 0 5.51485e+07 0.0236141 307747 5.56072e+07 4.85351e+06 21895 2.7407e+07 0 0.17805 0.991752 0.791461 5.51485e+07 0.00318438 1.21008e+07 5.31376e+06 1.21483e+07 133 1.21751e+07 9.53325e+06 0.0025307 1.22548e+07 50.1631 0.00553431 0.995198 0 50.098 GTEX-12ZZZ-0626-SM-5DUXI 0 B1 6 pieces; well trimmed; 10% intradermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 822 1063 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988687 270565 0.97097 0.991427 0.794073 22641 1 76 0.00194609 141 0 5.99382e+07 0.0288236 303802 6.04565e+07 5.78906e+06 22663 2.98216e+07 0 0.176897 0.991427 0.787265 5.99382e+07 0.00300458 1.31014e+07 8.15378e+06 1.31812e+07 141 1.32028e+07 1.03076e+07 0.00247387 1.32347e+07 50.0604 0.00502513 0.994167 0 50.152 GTEX-12ZZZ-0726-SM-5GCNZ 0 B1 6 pieces; well trimmed; <10% intradermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 839 1046 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.987994 283106 0.971556 0.991389 0.775228 23363 1 76 0.00232548 184 0 8.00419e+07 0.0282147 312925 8.07371e+07 5.55263e+06 23398 3.97914e+07 0 0.196327 0.991389 0.768553 8.00419e+07 0.0034912 1.75493e+07 9.80507e+06 1.76455e+07 189 1.7684e+07 1.32416e+07 0.00290635 1.77709e+07 50.1225 0.00387585 0.994783 0 50.1366 GTEX-12ZZZ-0926-SM-5N9EQ 1 B1 2 pieces; cortex; 10% internal fat 5.7 Adrenal Gland Adrenal Gland 0002369 848 1037 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988682 467105 0.965674 0.990235 0.803841 23846 1 76 0.00401083 271 0 9.86289e+07 0.0341278 6.38536e+06 9.96016e+07 5.22097e+06 23875 4.90121e+07 0 0.161833 0.990235 0.795991 9.86289e+07 0.00414787 2.15488e+07 1.86846e+07 2.16988e+07 330 2.1688e+07 1.0949e+07 0.00407924 2.17161e+07 50.0324 0.0641091 0.991788 0 50.1734 GTEX-12ZZZ-1226-SM-59HK1 2 B1 2 pieces 7.1 Thyroid Thyroid 0002046 855 1030 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.983896 227684 0.971366 0.989569 0.820408 24012 1 76 0.00242071 147 0 7.83709e+07 0.0282664 262222 7.9197e+07 1.41149e+07 24043 3.88572e+07 0 0.150957 0.989569 0.81185 7.83709e+07 0.00867914 1.70999e+07 8.9534e+06 1.72225e+07 165 1.73734e+07 1.55155e+07 0.00553198 1.73637e+07 49.9861 0.00331101 0.995241 0 50.1786 GTEX-12ZZZ-1326-SM-59HKW 1 B1 3 pieces; moderate macrovesicular steatosis 5.8 Liver Liver 0001114 857 1028 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.980928 308403 0.974185 0.986919 0.835461 20290 1 76 0.00236034 365 0 8.0522e+07 0.025769 4.09243e+06 8.15892e+07 1.42174e+07 20302 3.99399e+07 0 0.138724 0.986919 0.824532 8.0522e+07 0.0089122 1.79757e+07 3.44321e+07 1.7564e+07 339 1.73072e+07 3.38468e+06 0.00561638 1.85311e+07 51.7075 0.0501589 0.992911 0 49.4208 GTEX-12ZZZ-1726-SM-59HK5 1 B1 2 pieces; patchy scars (annotated) consistent with old infarcts 6.4 Heart Heart - Left Ventricle 0006566 865 1020 BP-44577 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.978658 159341 0.982835 0.984637 0.864582 20824 1 76 0.0024222 194 0 7.23802e+07 0.0169984 6.80031e+06 7.35096e+07 1.32601e+07 20834 3.59026e+07 0 0.118253 0.984637 0.851299 7.23802e+07 0.00888224 1.63417e+07 1.49253e+07 1.60094e+07 225 1.60876e+07 8.36607e+06 0.0056326 1.66119e+07 50.8017 0.0925092 0.990616 0 49.4864 GTEX-12ZZZ-2026-SM-5LZWJ 3 B1 2 pieces; glands largely autolyzed, fibromuscular stroma slightly autolyzed 6 Prostate Prostate 0002367 878 1007 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988744 149284 0.966945 0.989772 0.788777 23888 1 76 0.002518 131 0 6.05077e+07 0.0327449 624205 6.11329e+07 3.07299e+06 23912 3.01035e+07 0 0.178168 0.989772 0.78071 6.05077e+07 0.0032312 1.33319e+07 6.05434e+06 1.34208e+07 148 1.3407e+07 8.96684e+06 0.00287423 1.34096e+07 50.0049 0.0102106 0.9908 0 50.1662 GTEX-12ZZZ-2426-SM-5GCNN 3 B1 6 pieces; mucosa completely autolyzed; muscularis intact and mildly autolyzed 6.1 Colon Colon - Transverse 0001157 891 994 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.978927 205043 0.971468 0.984741 0.833048 23165 1 76 0.00214366 159 0 6.92312e+07 0.0282449 988703 7.0304e+07 6.406e+06 23180 3.42966e+07 0 0.138421 0.984741 0.820336 6.92312e+07 0.00359408 1.49035e+07 6.77354e+06 1.50099e+07 179 1.50499e+07 1.09974e+07 0.00286459 1.52438e+07 50.3199 0.0140633 0.990555 0 50.1778 GTEX-12ZZZ-3026-SM-5BC67 1 B1 2 pieces; small amount of meninges present 6.2 Brain Brain - Cortex 0001870 935 950 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.98922 326867 0.960641 0.99289 0.819695 23159 1 76 0.00261905 141 0 6.01926e+07 0.0390741 2.66088e+06 6.06236e+07 1.37009e+07 23178 2.99088e+07 0 0.140945 0.99289 0.813867 6.01926e+07 0.00504175 1.32062e+07 1.25417e+07 1.31607e+07 169 1.31387e+07 6.19764e+06 0.00382592 1.34275e+07 50.5437 0.0438918 0.99656 0 49.9136 GTEX-12ZZZ-3126-SM-5LZU6 1 B1 2 pieces 6.7 Brain Brain - Cerebellum 0002037 936 949 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990396 453333 0.943009 0.991622 0.734245 23769 1 76 0.00264955 200 0 8.2642e+07 0.0566584 1.49234e+06 8.33402e+07 3.93603e+06 23795 4.11335e+07 0 0.208764 0.991622 0.728093 8.2642e+07 0.00334484 1.77393e+07 2.00802e+07 1.79714e+07 219 1.7973e+07 9.66619e+06 0.00299677 1.78355e+07 49.808 0.0179066 0.992847 0 50.325 GTEX-13111-0002-SM-5TDBU B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1188 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988222 734441 0.964473 0.991604 0.812075 22436 1 76 0.00279274 177 0 8.41923e+07 0.0329001 710448 8.49052e+07 1.08485e+07 22456 4.17513e+07 0 0.152398 0.991604 0.805256 8.41923e+07 0.00453098 1.86188e+07 1.66844e+07 1.87004e+07 180 1.877e+07 1.82091e+07 0.0036589 1.88331e+07 50.0839 0.00836754 0.994985 0 50.1092 GTEX-13111-0003-SM-5ANG9 B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13111-0003-SM-5DWRJ B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-13111-0003-SM-6WSCF B1 Blood Whole Blood 0013756 1188 BP-42481 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13111-0005-SM-5NQ7Z B1 8.5 Blood Whole Blood 0013756 1188 BP-42484 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991748 805796 0.959289 0.993333 0.815801 19116 1 76 0.00245378 160 0 8.51691e+07 0.0400476 367898 8.57407e+07 6.80136e+06 19127 4.23997e+07 0 0.143487 0.993333 0.810362 8.51691e+07 0.0034413 1.86711e+07 4.80321e+07 1.88599e+07 176 1.88619e+07 1.81306e+07 0.00294675 1.88209e+07 49.9456 0.00429082 0.994919 0 50.2515 GTEX-13111-0008-SM-5YY8R B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 324 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991901 577543 0.978745 0.993077 0.856778 20814 1 76 0.00220978 292 0 1.13431e+08 0.0209313 327426 1.14222e+08 4.8928e+06 20833 5.65198e+07 0 0.121967 0.993077 0.850847 1.13431e+08 0.00280042 2.55328e+07 1.62264e+07 2.56165e+07 282 2.56454e+07 2.98226e+07 0.00250475 2.56443e+07 49.999 0.00286657 0.994254 0 50.0819 GTEX-13111-0126-SM-5EGHO 1 B1 2 pieces; 7.2 Spleen Spleen 0002106 266 503 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.98623 242597 0.965799 0.989044 0.779209 24709 1 76 0.00302243 204 0 8.59779e+07 0.032564 480397 8.69303e+07 9.61613e+06 24741 4.26944e+07 0 0.18659 0.989044 0.770672 8.59779e+07 0.00496962 1.89883e+07 1.16334e+07 1.90561e+07 224 1.90792e+07 1.31199e+07 0.00399325 1.91948e+07 50.151 0.00552623 0.991859 0 50.0892 GTEX-13111-0226-SM-5EQ55 1 B1 2 pieces; multifocal mild stromal fibrosis compromising thyroid follicles 6.6 Thyroid Thyroid 0002046 270 499 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991536 218574 0.967948 0.993719 0.754558 23590 1 76 0.00202876 120 0 5.85228e+07 0.0318031 233825 5.88927e+07 6.91962e+06 23621 2.91241e+07 0 0.21339 0.993719 0.749819 5.85228e+07 0.00302365 1.28106e+07 5.53515e+06 1.28727e+07 136 1.28543e+07 8.66358e+06 0.00252511 1.29521e+07 50.1895 0.00397035 0.995902 0 50.1209 GTEX-13111-0326-SM-5DUXF 1 B1 2 pieces; one with 80% and other with 40% of external fat; adrenal cortex 7.4 Adrenal Gland Adrenal Gland 0002369 272 497 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988589 256162 0.977421 0.991948 0.829558 22015 1 76 0.00207912 155 0 6.7857e+07 0.0223063 1.37011e+06 6.84078e+07 6.49973e+06 22032 3.3741e+07 0 0.147862 0.991948 0.822879 6.7857e+07 0.00318106 1.48974e+07 1.2427e+07 1.4931e+07 185 1.49133e+07 9.62728e+06 0.00262822 1.511e+07 50.3276 0.0200286 0.995306 0 50.0564 GTEX-13111-0426-SM-5DUXR 1 B1 2 pieces; thickening of the alveolar walls (fibrossi) with accumulation of a large number of mononuclear cells and hemosiderinophages; patchy lymphocytic interstitial infiltrates with associated hemosiderinophages; one piece contains thickened visceral pleura marked) 7.5 Lung Lung 0008952 273 496 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989217 220898 0.973098 0.991938 0.782813 23680 1 76 0.00234942 133 0 6.26974e+07 0.0260246 442172 6.3207e+07 5.95976e+06 23705 3.11724e+07 0 0.190285 0.991938 0.776502 6.26974e+07 0.00340148 1.39062e+07 6.89961e+06 1.39968e+07 145 1.39978e+07 1.01132e+07 0.00287401 1.40684e+07 50.1258 0.00699562 0.994658 0 50.1622 GTEX-13111-0526-SM-5LZVF 1 B1 6 pieces; early plaque formation; all have up to 1.5mm attached adventitial fat 7.3 Blood Vessel Artery - Aorta 0001496 279 490 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991996 170431 0.975361 0.993213 0.82771 22041 1 76 0.00245828 140 0 6.33066e+07 0.0242234 245920 6.37392e+07 3.21294e+06 22055 3.15265e+07 0 0.147651 0.993213 0.822092 6.33066e+07 0.00311285 1.3801e+07 4.77968e+06 1.39459e+07 150 1.39222e+07 1.13096e+07 0.00278516 1.38974e+07 49.9553 0.00385822 0.994429 0 50.261 GTEX-13111-0626-SM-5LZVR 1 B1 2 pieces; focal fresh mild hemorrhage (outlined) 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 282 487 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991638 208917 0.976733 0.992865 0.819449 22011 1 76 0.00244652 164 0 6.90169e+07 0.0230247 569451 6.95128e+07 3.33874e+06 22031 3.43753e+07 0 0.157285 0.992865 0.813602 6.90169e+07 0.00312629 1.51336e+07 8.1984e+06 1.53436e+07 177 1.52854e+07 1.06204e+07 0.00278598 1.52686e+07 49.9725 0.00819203 0.994092 0 50.3444 GTEX-13111-0726-SM-5DUVE 1 B1 6 pieces; full thickness of colonic wall 6.9 Colon Colon - Transverse 0001157 286 483 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987779 393806 0.968822 0.991286 0.809733 22547 1 76 0.00225982 135 0 5.95879e+07 0.0300538 1.0787e+06 6.01117e+07 4.94194e+06 22569 2.95799e+07 0 0.159089 0.991286 0.802677 5.95879e+07 0.00362649 1.31996e+07 1.22139e+07 1.31949e+07 155 1.31515e+07 7.98389e+06 0.00294074 1.34317e+07 50.527 0.0179448 0.994793 0 49.991 GTEX-13111-0826-SM-5LZV3 1 B1 6 pieces; small aggregates of lymphocytes in lamina propria; squamous epithelium measures 315.6um 9 Esophagus Esophagus - Mucosa 0006920 288 481 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991209 173336 0.977252 0.992435 0.840857 22100 1 76 0.00257414 146 0 6.64511e+07 0.0222244 253169 6.69576e+07 3.26553e+06 22117 3.31055e+07 0 0.136395 0.992435 0.834496 6.64511e+07 0.00316586 1.49846e+07 8.82311e+06 1.50607e+07 150 1.50764e+07 1.39088e+07 0.00286963 1.50484e+07 49.9535 0.00378104 0.993661 0 50.1266 GTEX-13111-0926-SM-5DUVQ 1 B1 6 pieces; well trimmed 7.8 Esophagus Esophagus - Muscularis 0004648 290 479 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98765 1.48208e+06 0.914969 0.990083 0.752033 21784 1 76 0.00186998 159 0 7.28882e+07 0.0846934 789023 7.36183e+07 6.09778e+06 21802 3.62749e+07 0 0.162936 0.990083 0.744575 7.28882e+07 0.00290259 1.46027e+07 5.75507e+07 1.48229e+07 169 1.47708e+07 1.07034e+07 0.00238501 1.4841e+07 50.1184 0.0107178 0.992515 0 50.374 GTEX-13111-1126-SM-5GCMZ 1 B1 6 pieces; smooth muscle layers with adherent serosal fat on 5 of 6 pieces, up to 1.3 mm thick 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 295 474 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.986125 197928 0.978366 0.990833 0.832435 22036 1 76 0.00205705 145 0 6.49648e+07 0.0213444 546385 6.55659e+07 5.54854e+06 22055 3.22559e+07 0 0.145931 0.990833 0.824804 6.49648e+07 0.00329989 1.40633e+07 6.33963e+06 1.41392e+07 161 1.41929e+07 1.09627e+07 0.00267552 1.42925e+07 50.1748 0.00833337 0.995541 0 50.1346 GTEX-13111-1226-SM-5GCNC 1 B1 6 pieces; mucosa missing on all pieces; only muscularis and submucosa present 7.3 Stomach Stomach 0000945 300 469 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985575 226492 0.975222 0.990572 0.805276 22301 1 76 0.00205885 133 0 5.90093e+07 0.0245364 470290 5.95709e+07 4.84057e+06 22315 2.92823e+07 0 0.169945 0.990572 0.797684 5.90093e+07 0.00338501 1.28784e+07 5.89402e+06 1.29369e+07 144 1.29705e+07 9.26579e+06 0.00271859 1.31194e+07 50.2854 0.00789463 0.995569 0 50.1135 GTEX-13111-1326-SM-5GCNO 1 B1 2 pieces; 1 shows stromal fibrosis, numerous corpora amylacea; second piece consists of 25% glandular component (outlined) and 75% fibromuscular stroma 7 Prostate Prostate 0002367 306 463 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984149 196910 0.970854 0.989421 0.811417 23489 1 76 0.00211891 136 0 6.62781e+07 0.028878 496496 6.69868e+07 5.77938e+06 23510 3.28856e+07 0 0.159437 0.989421 0.802833 6.62781e+07 0.00336612 1.41921e+07 5.56295e+06 1.42803e+07 154 1.43368e+07 1.12325e+07 0.00273919 1.44592e+07 50.2125 0.00741185 0.994692 0 50.1549 GTEX-13111-1426-SM-5DUW3 1 B1 6 pieces; each piece contains one to two well preserved lymphoid nodules (outlined); surface mucosa autolyzed and only focally preserved; muscle (not target) present on all 6.4 Small Intestine Small Intestine - Terminal Ileum 0001211 308 461 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988421 208515 0.970827 0.990802 0.792288 25019 1 76 0.00215982 134 0 6.76154e+07 0.0283894 384073 6.82431e+07 6.14381e+06 25050 3.36321e+07 0 0.178539 0.990802 0.785 6.76154e+07 0.00317332 1.48171e+07 7.77941e+06 1.48449e+07 163 1.48185e+07 1.04472e+07 0.00266535 1.49965e+07 50.2985 0.00562801 0.993183 0 50.0469 GTEX-13111-1526-SM-5EGJX 2 B1 2 pieces; sloughing of germ cells into tubule lumina, spermatogenesis decreased; second piece devoid of testicular tubules, consists only of fibromuscular stroma, vessels and nerves 6.1 Testis Testis 0000473 311 458 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988893 297898 0.931667 0.991824 0.732318 32545 1 76 0.00196307 144 0 7.45228e+07 0.0680408 750799 7.51371e+07 6.2523e+06 32606 3.70653e+07 0 0.199349 0.991824 0.72633 7.45228e+07 0.00287342 1.54694e+07 1.05296e+07 1.54905e+07 162 1.55398e+07 1.13757e+07 0.0024169 1.56148e+07 50.1204 0.00999239 0.994754 0 50.0341 GTEX-13111-1626-SM-5EGJY 1 B1 6 pieces; each piece contains external fat up to 2.6 mm thick; epidermis measures 42.9 um in thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 321 448 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.9889 382318 0.968108 0.992235 0.804273 22772 1 76 0.00198948 226 0 7.69776e+07 0.031625 522023 7.758e+07 7.25939e+06 22795 3.82595e+07 0 0.163836 0.992235 0.798027 7.69776e+07 0.00313917 1.66185e+07 1.19092e+07 1.67711e+07 192 1.67959e+07 1.29895e+07 0.00256239 1.68394e+07 50.0647 0.00672883 0.99557 0 50.2286 GTEX-13111-1726-SM-5EGJZ 1 B1 2 pieces, adipose and fibrovascular tissue with small focus of sweat glands 7 Adipose Tissue Adipose - Subcutaneous 0002190 325 444 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986749 480623 0.963796 0.990695 0.8248 23186 1 76 0.0018645 173 0 7.89186e+07 0.0358799 647589 7.96598e+07 7.5877e+06 23204 3.9173e+07 0 0.138996 0.990695 0.817126 7.89186e+07 0.00323382 1.68587e+07 1.70539e+07 1.70779e+07 197 1.70509e+07 1.403e+07 0.00254643 1.71895e+07 50.2023 0.00812943 0.994642 0 50.3229 GTEX-13111-1826-SM-5GCP1 1 B1 6 pieces; each piece contains up to 30% of mainly subcutaneous fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 330 439 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.986171 174743 0.969175 0.990636 0.806182 24842 1 76 0.00209577 169 0 7.65398e+07 0.0306079 630850 7.72633e+07 6.52282e+06 24866 3.80113e+07 0 0.162993 0.990636 0.798633 7.65398e+07 0.00330376 1.67516e+07 7.40303e+06 1.68421e+07 192 1.68753e+07 1.26937e+07 0.00269704 1.70416e+07 50.2452 0.00816494 0.995102 0 50.1347 GTEX-13111-1926-SM-5GCOL 1 B1 6 pieces; well trimmed muscle 7.4 Colon Colon - Sigmoid 0001159 332 437 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98416 256922 0.975192 0.98963 0.828424 22809 1 76 0.00205923 167 0 6.95618e+07 0.0244724 476641 7.02907e+07 5.93356e+06 22828 3.45022e+07 0 0.146768 0.98963 0.819833 6.95618e+07 0.00339239 1.50893e+07 6.67937e+06 1.51644e+07 169 1.52335e+07 1.21433e+07 0.00272212 1.53743e+07 50.2301 0.006781 0.9951 0 50.124 GTEX-13111-2026-SM-5GCMN 1 B1 2 pieces; >5% of external fat (outlined) 6.7 Nerve Nerve - Tibial 0001323 329 440 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983232 264065 0.970345 0.988002 0.789739 23840 1 76 0.00211537 187 0 7.44892e+07 0.0293236 337257 7.53938e+07 6.21279e+06 23871 3.69671e+07 0 0.180605 0.988002 0.780264 7.44892e+07 0.00332458 1.63433e+07 6.40569e+06 1.64623e+07 175 1.6538e+07 1.29184e+07 0.00271706 1.6606e+07 50.1026 0.00447327 0.992773 0 50.1814 GTEX-13111-2126-SM-5LZU2 1 B1 3 pieces; 1 represents fibrovascular and adipose tissue; vein attached to 1 artery (labeled) 6.6 Blood Vessel Artery - Tibial 0007610 334 435 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991278 165101 0.974937 0.992528 0.864654 21226 1 76 0.00229117 198 0 8.04309e+07 0.0247027 470589 8.10364e+07 4.07805e+06 21237 4.00243e+07 0 0.110282 0.992528 0.858194 8.04309e+07 0.00315649 1.69965e+07 5.72730e+06 1.72061e+07 203 1.71118e+07 1.60998e+07 0.00272328 1.71944e+07 50.1205 0.00580713 0.993778 0 50.3063 GTEX-13111-2226-SM-5LZUE 1 B1 2 pieces; 5% internal fat 7.9 Muscle Muscle - Skeletal 0011907 336 433 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992562 147984 0.986653 0.993891 0.884022 18748 1 76 0.00227561 162 0 6.98999e+07 0.0131375 1.01369e+06 7.03296e+07 3.54243e+06 18753 3.48398e+07 0 0.102632 0.993891 0.878621 6.98999e+07 0.00289446 1.52778e+07 1.31644e+07 1.54628e+07 194 1.53581e+07 1.32255e+07 0.00258462 1.54633e+07 50.1707 0.0144134 0.99522 0 50.301 GTEX-13111-2326-SM-5LZUQ 1 B1 2 pieces; well dissected glands with moderate atrophy and fibrosis; less than 5% of internal fat 8.1 Salivary Gland Minor Salivary Gland 0006330 344 425 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992121 153341 0.974609 0.9931 0.807445 23911 1 76 0.00256015 176 0 7.19557e+07 0.0245891 269200 7.24557e+07 3.52408e+06 23935 3.58301e+07 0 0.167164 0.9931 0.801873 7.19557e+07 0.00309861 1.5983e+07 7.4231e+06 1.60968e+07 168 1.60957e+07 1.3337e+07 0.00282912 1.60521e+07 49.9322 0.00371538 0.994079 0 50.1774 GTEX-13111-5001-SM-AN3XJ B1 Lung Lung 0008952 278 ChIP-Seq GTEX-13112-0004-SM-5ANFX B1 Blood Whole Blood 0013756 1161 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13112-0004-SM-5DWRX B1 Blood Whole Blood 0013756 1161 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-13112-0004-SM-6WSBQ B1 Blood Whole Blood 0013756 1161 BP-42417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/16/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13112-0008-SM-5YY9M B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1354 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993253 369732 0.974676 0.994304 0.840512 21155 1 76 0.00226836 221 0 8.71926e+07 0.024983 346149 8.76922e+07 3.77885e+06 21176 4.34488e+07 0 0.134164 0.994304 0.835724 8.71926e+07 0.00285216 1.94657e+07 1.26365e+07 1.95403e+07 203 1.95356e+07 2.13226e+07 0.00255995 1.95665e+07 50.0395 0.00394732 0.995355 0 50.0955 GTEX-13112-0011-R1b-SM-5HL7K B1, A1 6.7 Brain Brain - Hippocampus 0001954 1176 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989985 693985 0.96001 0.992983 0.847736 22182 1 76 0.00186036 370 0 8.2547e+07 0.0398227 6.01974e+06 8.31303e+07 7.24701e+06 22194 4.10613e+07 0 0.112274 0.992983 0.841788 8.2547e+07 0.00299878 1.77645e+07 2.94388e+07 1.81901e+07 348 1.79039e+07 5.44803e+06 0.00242785 1.82685e+07 50.5039 0.0724133 0.995981 0 50.5919 GTEX-13112-0011-R3b-SM-5HL9L B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1176 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.9881 665794 0.960888 0.992007 0.861284 21905 1 76 0.00188006 198 0 6.57255e+07 0.0388646 4.70406e+06 6.62551e+07 5.64906e+06 21915 3.26389e+07 0 0.0996037 0.992007 0.8544 6.57255e+07 0.00324118 1.44264e+07 1.84564e+07 1.44063e+07 234 1.42737e+07 6.02448e+06 0.00255794 1.48e+07 50.9051 0.0709993 0.995915 0 49.9652 GTEX-13112-0011-R4b-SM-5DUXL B1, A1 7.1 Brain Brain - Amygdala 0001876 1176 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989925 523703 0.962956 0.992334 0.834449 22369 1 76 0.00173517 273 0 7.4323e+07 0.0368099 6.02968e+06 7.48972e+07 6.40509e+06 22381 3.70003e+07 0 0.128507 0.992334 0.828051 7.4323e+07 0.00286374 1.63138e+07 2.6139e+07 1.61367e+07 274 1.60096e+07 6.71718e+06 0.00229808 1.66018e+07 50.9079 0.0805061 0.994742 0 49.7272 GTEX-13112-0011-R5b-SM-5DUV8 B1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 1176 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989297 422385 0.969048 0.991937 0.832094 21078 1 76 0.00167056 264 0 6.61629e+07 0.0307625 5.99326e+06 6.67007e+07 5.92212e+06 21086 3.29298e+07 0 0.136954 0.991937 0.825385 6.61629e+07 0.00287458 1.44514e+07 3.24462e+07 1.41672e+07 268 1.3974e+07 4.7318e+06 0.00227097 1.48105e+07 51.453 0.089853 0.994578 0 49.5035 GTEX-13112-0011-R6b-SM-5DUVK B1, A1 8.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1176 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988891 508257 0.961538 0.99156 0.813943 22997 1 76 0.00177881 268 0 7.361e+07 0.0382142 4.80641e+06 7.42365e+07 6.60569e+06 23009 3.66274e+07 0 0.147594 0.99156 0.807073 7.361e+07 0.00284971 1.6027e+07 2.82028e+07 1.57015e+07 258 1.56159e+07 7.01032e+06 0.00231282 1.62974e+07 51.0676 0.0647445 0.994228 0 49.487 GTEX-13112-0011-R7b-SM-5DUVW B1, A1 8.7 Brain Brain - Putamen (basal ganglia) 0001874 1176 BP-44878 RNA isolation_PAXgene Tissue miRNA 10/22/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988375 586421 0.959337 0.99207 0.821244 23637 1 76 0.00178505 266 0 8.17393e+07 0.0403798 4.61708e+06 8.23926e+07 7.98259e+06 23654 4.06309e+07 0 0.138092 0.99207 0.814732 8.17393e+07 0.0031263 1.77475e+07 2.46357e+07 1.77238e+07 291 1.76566e+07 8.31672e+06 0.00245318 1.80913e+07 50.6081 0.0560375 0.995766 0 49.9666 GTEX-13112-0011-R8b-SM-664OV B1, A1 6 Brain Brain - Hypothalamus 0001898 1176 BP-50015 RNA isolation_PAXgene Tissue miRNA 02/28/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990407 465238 0.969683 0.991136 0.834548 23203 1 76 0.00198577 370 0 9.82668e+07 0.0301195 9.20074e+06 9.91455e+07 5.88595e+06 23218 4.88903e+07 0 0.135135 0.991136 0.827151 9.82668e+07 0.00287303 2.12757e+07 3.62927e+07 2.17711e+07 408 2.14364e+07 7.39849e+06 0.00242908 2.16717e+07 50.2729 0.0928003 0.991866 0 50.5755 GTEX-13112-0126-SM-5P9IU 1 B1 6 pieces; hair-bearing skin sampled (not target); 20-50% intradermal and subcutaneous adipose tissue 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1194 657 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990822 195708 0.975056 0.991065 0.80979 24752 1 76 0.00323189 281 0 1.06467e+08 0.0246664 449641 1.07427e+08 3.50266e+06 24785 5.3033e+07 0 0.165266 0.991065 0.802554 1.06467e+08 0.00342497 2.34575e+07 1.25427e+07 2.36468e+07 309 2.35389e+07 1.87598e+07 0.00332841 2.35953e+07 50.0598 0.00418556 0.991307 0 50.2009 GTEX-13112-0226-SM-5P9IV 1 B1 2 pieces; active spermatogenesis 6.1 Testis Testis 0000473 1197 654 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99117 284024 0.922932 0.991618 0.738473 33510 1 76 0.0031819 182 0 8.87688e+07 0.0766943 691156 8.95192e+07 2.963e+06 33574 4.42333e+07 0 0.184459 0.991618 0.732283 8.87688e+07 0.00335794 1.81998e+07 1.36291e+07 1.82646e+07 193 1.82448e+07 1.52323e+07 0.00326988 1.82561e+07 50.0154 0.00772076 0.992065 0 50.0889 GTEX-13112-0326-SM-5P9IW 1 B1 2 pieces 6.8 Thyroid Thyroid 0002046 1198 653 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990055 329230 0.96118 0.990593 0.707 26932 1 76 0.00333458 204 0 9.72358e+07 0.0385306 321214 9.81592e+07 3.04269e+06 26995 4.84127e+07 0 0.25418 0.990593 0.700349 9.72358e+07 0.00369726 2.11631e+07 1.00927e+07 2.13165e+07 229 2.12669e+07 1.3649e+07 0.00351582 2.12625e+07 49.9948 0.00327238 0.991131 0 50.1806 GTEX-13112-0426-SM-5PNVC 0 B1 2 pieces; 5% internal fat 7.1 Heart Heart - Left Ventricle 0006566 1201 650 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992801 154843 0.978268 0.994354 0.859288 21355 1 76 0.00180511 154 0 6.46601e+07 0.0215486 4.27435e+06 6.50272e+07 5.99394e+06 21368 3.22032e+07 0 0.11898 0.994354 0.854437 6.46601e+07 0.00295134 1.4252e+07 7.27477e+06 1.44937e+07 193 1.44287e+07 8.93147e+06 0.00237733 1.44086e+07 49.9651 0.0657318 0.995908 0 50.4203 GTEX-13112-0526-SM-5EQ4S 0 B1 2 pieces; 1 has 20% internal fat 5.9 Heart Heart - Atrial Appendage 0006631 1204 647 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991258 254042 0.977623 0.993945 0.821568 22364 1 76 0.00185139 265 0 7.57043e+07 0.0219924 4.14051e+06 7.61655e+07 8.88441e+06 22380 3.76521e+07 0 0.156055 0.993945 0.816593 7.57043e+07 0.00316793 1.65776e+07 1.53861e+07 1.64513e+07 257 1.63853e+07 8.43106e+06 0.00250788 1.68323e+07 50.6727 0.054362 0.996632 0 49.8088 GTEX-13112-1126-SM-5GCMY 0 B1 2 pieces 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1224 627 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985357 167803 0.974061 0.990039 0.830861 22688 1 76 0.00209703 135 0 6.22094e+07 0.0256431 457045 6.28353e+07 5.14737e+06 22709 3.08802e+07 0 0.143199 0.990039 0.822585 6.22094e+07 0.003382 1.36419e+07 6.93885e+06 1.36902e+07 161 1.37323e+07 9.64928e+06 0.00273648 1.3877e+07 50.2622 0.0072737 0.994721 0 50.0883 GTEX-13112-1426-SM-5EGH8 1 B1 2 pieces; 5% macrovesicular steatosis 5.7 Liver Liver 0001114 1234 617 BP-44525 RNA Extraction from Paxgene-derived Lysate Plate Based 10/10/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984886 181026 0.973133 0.990355 0.818534 20881 1 76 0.00218786 150 0 6.43437e+07 0.0267735 1.71696e+06 6.49704e+07 1.04236e+07 20891 3.19302e+07 0 0.1546 0.990355 0.810639 6.43437e+07 0.0054079 1.42258e+07 1.40972e+07 1.40063e+07 179 1.40538e+07 7.22257e+06 0.00378899 1.44808e+07 50.7482 0.0264268 0.995824 0 49.6112 GTEX-13112-2126-SM-5GCO4 2 B1 6 pieces; 2 pieces are mostly medulla [annotated] 6.2 Kidney Kidney - Cortex 0001225 1261 590 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.98416 231486 0.966103 0.98903 0.813669 23584 1 76 0.00213101 151 0 6.57094e+07 0.0336975 2.16539e+06 6.64383e+07 5.34642e+06 23601 3.26027e+07 0 0.152434 0.98903 0.804743 6.57094e+07 0.00360909 1.43906e+07 7.94262e+06 1.43722e+07 180 1.44045e+07 8.39389e+06 0.00286641 1.46584e+07 50.4369 0.0325925 0.9939 0 49.9681 GTEX-13112-2626-SM-5BC66 0 B1 2 pieces; <10% internal fat 6.7 Muscle Muscle - Skeletal 0011907 1351 500 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.989897 235733 0.98398 0.99337 0.873993 19659 1 76 0.00242716 156 0 7.42376e+07 0.0158114 1.09493e+06 7.47331e+07 2.11621e+07 19669 3.69238e+07 0 0.109987 0.99337 0.868199 7.42376e+07 0.0043148 1.62211e+07 9.5512e+06 1.6144e+07 174 1.62418e+07 1.55936e+07 0.00336768 1.63524e+07 50.1696 0.0146512 0.996843 0 49.8809 GTEX-13112-2726-SM-5DUW5 1 B1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1353 498 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988114 246368 0.973622 0.991395 0.805662 22704 1 76 0.0019314 141 0 6.37929e+07 0.0260366 464352 6.43466e+07 6.22917e+06 22720 3.17124e+07 0 0.16796 0.991395 0.798729 6.37929e+07 0.00298056 1.39744e+07 7.24317e+06 1.40436e+07 154 1.40809e+07 1.07055e+07 0.00245424 1.41312e+07 50.0892 0.00721642 0.994675 0 50.1235 GTEX-13112-2826-SM-5DUWH 1 B1 6 pieces; well trimmed; 10% intradermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1355 496 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989021 243002 0.974084 0.991585 0.791597 22406 1 76 0.00201808 137 0 5.71353e+07 0.0256525 196550 5.76201e+07 5.44593e+06 22427 2.84255e+07 0 0.182487 0.991585 0.784936 5.71353e+07 0.00316268 1.24531e+07 6.78168e+06 1.25099e+07 131 1.25484e+07 1.03269e+07 0.0025889 1.25529e+07 50.0091 0.00341114 0.99415 0 50.1138 GTEX-13112-2926-SM-5DUWT 1 B1 3 pieces (fragmented) 6.9 Brain Brain - Cerebellum 0002037 1383 468 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987731 365056 0.94917 0.99109 0.74274 22910 1 76 0.00206935 109 0 5.95321e+07 0.0504832 949890 6.00673e+07 5.56093e+06 22930 2.95872e+07 0 0.20643 0.99109 0.736123 5.95321e+07 0.00325247 1.28566e+07 1.17243e+07 1.29598e+07 138 1.30162e+07 7.5759e+06 0.0026589 1.29856e+07 49.9411 0.0158138 0.99445 0 50.1998 GTEX-13112-3126-SM-5IFGP 1 B1 1 piece; large amount [4x1 mm] of adherent dura (annotated) 6.5 Pituitary Pituitary 0000007 1390 461 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.9871 591990 0.938068 0.990979 0.737951 25998 1 76 0.00234934 162 0 7.82149e+07 0.0616809 356014 7.89269e+07 9.74336e+06 26032 3.88571e+07 0 0.200117 0.990979 0.731295 7.82149e+07 0.00376907 1.54857e+07 2.50826e+07 1.57325e+07 176 1.58141e+07 1.14647e+07 0.00305642 1.56889e+07 49.8013 0.00451068 0.994859 0 50.3953 GTEX-13113-0003-SM-5ANGI B1 Blood Whole Blood 0013756 -214 BP-42529 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13113-0003-SM-5DWRH B1 Blood Whole Blood 0013756 -214 BP-42529 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-13113-0004-SM-DO3XJ B1 Blood Whole Blood 0013756 -214 BP-42529 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2013 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-13113-0006-SM-5NQ7X B1 8.4 Blood Whole Blood 0013756 -214 BP-42668 RNA isolation_PAXgene Blood RNA (Manual) 08/23/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.974372 414596 0.977586 0.97543 0.842206 15504 1 76 0.00234674 93 0 7.20794e+07 0.0216782 204873 7.38951e+07 6.40386e+06 15508 3.59208e+07 0 0.13538 0.97543 0.821513 7.20794e+07 0.00320315 1.69363e+07 1.06495e+08 1.70877e+07 126 1.70768e+07 2.03699e+07 0.00277448 1.70336e+07 49.9367 0.00277249 0.976488 0 50.2226 GTEX-13113-0008-SM-5YY9T B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 295 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992277 457441 0.972995 0.993587 0.837752 21516 1 76 0.00248782 184 0 9.12189e+07 0.0266824 427395 9.18076e+07 4.30355e+06 21538 4.5445e+07 0 0.135244 0.993587 0.832379 9.12189e+07 0.00311386 2.03134e+07 1.47583e+07 2.0417e+07 191 2.04139e+07 2.31605e+07 0.00280043 2.04426e+07 50.035 0.00465533 0.994898 0 50.1271 GTEX-13113-0126-SM-5LZVX 1 B1 2 pieces, multinodular goiter, colloid nodules up to ~5mm 5.9 Thyroid Thyroid 0002046 200 894 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990692 181715 0.96161 0.992071 0.699083 23757 1 76 0.00283317 119 0 6.58465e+07 0.0381497 254586 6.63727e+07 3.17182e+06 23796 3.27827e+07 0 0.262527 0.992071 0.69354 6.58465e+07 0.00348869 1.42685e+07 6.70585e+06 1.43628e+07 131 1.43789e+07 9.16443e+06 0.00316048 1.43362e+07 49.9257 0.0038357 0.993451 0 50.1646 GTEX-13113-0426-SM-5GCOD 1 B1 2 pieces chronic interstitial pneumonitis 6.8 Lung Lung 0008952 211 883 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.985576 265180 0.973164 0.989987 0.793292 23103 1 76 0.00242498 135 0 6.74956e+07 0.0265368 300095 6.81783e+07 5.72119e+06 23134 3.35149e+07 0 0.179872 0.989987 0.785349 6.74956e+07 0.00361968 1.48618e+07 6.02141e+06 1.49443e+07 150 1.5017e+07 1.18202e+07 0.00301967 1.50725e+07 50.0922 0.00440162 0.994398 0 50.1384 GTEX-13113-0526-SM-5GCN2 1 B1 6 pieces, mild atherosis (~0.2mm); adherent serosa up to ~0.5mm 7.7 Blood Vessel Artery - Aorta 0001496 215 879 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795,LCSET-5132 03/08/2014 TruSeq.v1 RNASEQ 0.988917 258640 0.977345 0.992311 0.841102 21769 1 76 0.00236059 167 0 7.80434e+07 0.0222284 274182 7.86482e+07 5.71553e+06 21788 3.87875e+07 0 0.136243 0.992311 0.834634 7.80434e+07 0.00344988 1.66455e+07 6.08721e+06 1.67304e+07 188 1.67642e+07 1.50148e+07 0.00290337 1.68591e+07 50.1411 0.00348618 0.995704 0 50.1271 GTEX-13113-0626-SM-5GCP2 1 B1 6 pieces, trace residual squamous mucosa (delineated) and mucous glands (encircled) 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 222 872 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.97275 5.08024e+06 0.797737 0.977638 0.625679 22139 1 76 0.00222359 126 0 7.39886e+07 0.201002 1.22870e+06 7.56809e+07 6.94896e+06 22153 3.66594e+07 0 0.172058 0.977638 0.611688 7.39886e+07 0.0037097 1.30916e+07 1.63235e+08 1.3443e+07 133 1.34177e+07 9.7299e+06 0.00296293 1.36296e+07 50.3917 0.0162353 0.982526 0 50.662 GTEX-13113-0726-SM-5LZUF 1 B1 6 pieces, exceptionally well-preserved mucosa, up to ~1mm, ~30-40% thickness 6.5 Stomach Stomach 0000945 229 865 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989084 143644 0.978181 0.990305 0.822755 22890 1 76 0.00314049 258 0 8.19419e+07 0.0215576 1.61198e+06 8.27441e+07 3.97697e+06 22915 4.08297e+07 0 0.155426 0.990305 0.814778 8.19419e+07 0.00377536 1.81239e+07 4.42967e+07 1.85082e+07 225 1.84243e+07 1.49775e+07 0.00345753 1.82929e+07 49.8211 0.0194815 0.991526 0 50.5245 GTEX-13113-1026-SM-5LZWM 1 B1 6 pieces, all muscularis 6.7 Esophagus Esophagus - Muscularis 0004648 241 853 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 EXCLUDE 0.987462 202446 0.934116 0.988422 0.754363 25473 1 76 0.00288321 134 0 6.97164e+07 0.0656808 657429 7.0533e+07 3.70560e+06 25496 3.46575e+07 0 0.179753 0.988422 0.745629 6.97164e+07 0.00364078 1.44337e+07 7.78437e+06 1.44908e+07 149 1.44513e+07 1.12147e+07 0.00326163 1.45421e+07 50.1566 0.00932086 0.989382 0 50.0988 GTEX-13113-1126-SM-5LZU9 1 B1 2 pieces, ~10% vascular/mesothelial tissue, rep. delineated 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 245 849 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991857 261509 0.97579 0.993041 0.82927 22682 1 76 0.00276724 197 0 8.06187e+07 0.0239757 512152 8.11837e+07 3.83852e+06 22703 4.01278e+07 0 0.14652 0.993041 0.823499 8.06187e+07 0.0035305 1.75611e+07 7.9784e+06 1.77011e+07 206 1.76571e+07 1.30852e+07 0.00314841 1.76969e+07 50.0563 0.00630856 0.994224 0 50.1985 GTEX-13113-1226-SM-5EGHT 1 B1 6 pieces, exceptionally well-preserved; lymphoid aggregates ~10-15% of total tissue, delineated 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 249 845 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980036 216982 0.97101 0.985717 0.783712 23962 1 76 0.00326168 142 0 6.71477e+07 0.0281042 501908 6.81207e+07 1.12148e+07 23994 3.32756e+07 0 0.187297 0.985717 0.772518 6.71477e+07 0.00655911 1.47176e+07 9.97008e+06 1.4685e+07 142 1.47868e+07 1.06991e+07 0.00490089 1.49661e+07 50.3013 0.00736792 0.991398 0 49.9447 GTEX-13113-1326-SM-5GCOI 1 B1 2 pieces, diffuse microvesicular steatosis, mild-moderate fibrosis 7 Liver Liver 0001114 254 840 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984611 195171 0.977357 0.989551 0.805471 20485 1 76 0.00272548 127 0 6.77562e+07 0.0224906 555923 6.84717e+07 5.96137e+06 20503 3.36421e+07 0 0.171886 0.989551 0.797055 6.77562e+07 0.00387165 1.44746e+07 1.17965e+07 1.45836e+07 152 1.46021e+07 1.05798e+07 0.0032957 1.47493e+07 50.2507 0.00811902 0.994492 0 50.1876 GTEX-13113-1426-SM-5EGHU 1 B1 6 pieces, ~90% muscularis; 'contaminant mucosa up to ~10% 8.2 Colon Colon - Sigmoid 0001159 257 837 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.98134 194902 0.972169 0.987159 0.790337 23423 1 76 0.00317683 165 0 6.33495e+07 0.0271793 845316 6.41735e+07 1.0722e+07 23449 3.14001e+07 0 0.181832 0.987159 0.780188 6.33495e+07 0.00660192 1.38292e+07 9.56235e+06 1.37355e+07 141 1.38295e+07 9.39481e+06 0.00487928 1.40706e+07 50.432 0.0131723 0.992977 0 49.8301 GTEX-13113-1526-SM-5EGHV 1 B1 3 pieces, ~70% gland parenchyma (delineated) rest stroma/connective tissue. Good specimens 8.6 Salivary Gland Minor Salivary Gland 0006330 270 824 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984298 176278 0.971661 0.989163 0.786058 23543 1 76 0.0027416 125 0 5.89434e+07 0.027953 187376 5.95891e+07 8.77869e+06 23563 2.92566e+07 0 0.185603 0.989163 0.777539 5.89434e+07 0.0059994 1.3089e+07 9.702e+06 1.30445e+07 127 1.31406e+07 1.03319e+07 0.00436249 1.32653e+07 50.2361 0.00314447 0.994027 0 49.9148 GTEX-13113-1626-SM-5EQ4I 0 B1 6 pieces. Trace dermal fat; Squamous epithelium is ~75 mcirons 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 276 818 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989425 316480 0.971559 0.99251 0.787085 23478 1 76 0.00224814 172 0 7.46559e+07 0.0282052 232610 7.52193e+07 8.58683e+06 23508 3.711e+07 0 0.184475 0.99251 0.781189 7.46559e+07 0.0034702 1.62961e+07 8.32418e+06 1.64633e+07 170 1.64704e+07 1.29103e+07 0.00285727 1.65091e+07 50.0588 0.00309243 0.995594 0 50.2552 GTEX-13113-1726-SM-5GCOO 1 B1 2 pieces mainly adipose tissue; trace ductal elements in one section, rep delineated 6.8 Breast Breast - Mammary Tissue 0008367 284 810 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 EXCLUDE 0.983637 223980 0.975863 0.989227 0.798798 23717 1 76 0.00239891 164 0 7.52523e+07 0.0238373 247989 7.60718e+07 7.06964e+06 23742 3.73198e+07 0 0.177065 0.989227 0.790192 7.52523e+07 0.00372875 1.63732e+07 8.15628e+06 1.65346e+07 173 1.6625e+07 1.28213e+07 0.00306007 1.66771e+07 50.0783 0.00325993 0.994817 0 50.2453 GTEX-13113-1826-SM-5LZW4 0 B1 2 pieces, ~5-10% fascial tissue, rep delinated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 292 802 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992332 172428 0.976308 0.99345 0.80767 21645 1 76 0.00272695 136 0 6.31725e+07 0.0233984 328838 6.3589e+07 3.0174e+06 21668 3.14565e+07 0 0.168637 0.99345 0.80238 6.31725e+07 0.0034015 1.38305e+07 6.24615e+06 1.3911e+07 144 1.3909e+07 1.12515e+07 0.00306384 1.39021e+07 49.9877 0.0051713 0.994569 0 50.1451 GTEX-13113-1926-SM-5LZWG 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50microns. 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 296 798 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 EXCLUDE 0.991425 167057 0.970754 0.992579 0.778245 23303 1 76 0.00273897 155 0 6.84186e+07 0.02902 282049 6.89302e+07 3.24751e+06 23331 3.4079e+07 0 0.192509 0.992579 0.772469 6.84186e+07 0.00339129 1.49767e+07 7.13609e+06 1.5083e+07 150 1.50748e+07 1.17825e+07 0.00306475 1.50605e+07 49.9762 0.00409181 0.993733 0 50.1769 GTEX-13113-2026-SM-5LZU3 0 B1 2 pieces, incomplete rim of fat up to ~1mm, delineated 7.8 Nerve Nerve - Tibial 0001323 299 795 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991187 290029 0.970804 0.99198 0.778712 23934 1 76 0.00262167 184 0 7.82187e+07 0.0288813 192790 7.88511e+07 3.98516e+06 23973 3.88998e+07 0 0.192092 0.99198 0.772467 7.82187e+07 0.00331678 1.7197e+07 6.4096e+06 1.72428e+07 176 1.72659e+07 1.35488e+07 0.00296895 1.72395e+07 49.9618 0.00244499 0.992773 0 50.0665 GTEX-13113-2126-SM-5EQ4U 0 B1 2 pieces, no adherent fat, excellent specimens. One section near bifurcation of smaller vessel. 7.5 Blood Vessel Artery - Tibial 0007610 300 794 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989728 252499 0.97426 0.992944 0.815955 20746 1 76 0.00213573 133 0 6.06899e+07 0.0253716 210142 6.11212e+07 7.56024e+06 20765 3.01544e+07 0 0.158305 0.992944 0.810198 6.06899e+07 0.00341895 1.29833e+07 4.99431e+06 1.3092e+07 139 1.30973e+07 1.14363e+07 0.00277526 1.31643e+07 50.1275 0.00343812 0.99616 0 50.2085 GTEX-13113-5001-SM-AN3XM B1 Heart Heart - Left Ventricle 0006566 206 ChIP-Seq GTEX-13113-5004-SM-79ONL B1 6.6 Lung Lung 0008952 212 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6381,LCSET-6775 01/31/2015 TruSeq.v1 RNASEQ 0.99435 549179 0.971985 0.994907 0.831231 25750 1 76 0.00284606 384 0 1.60587e+08 0.0276499 729712 1.61409e+08 1.15142e+07 25793 8.00735e+07 0 0.140754 0.994907 0.826997 1.60587e+08 0.00372589 3.52932e+07 1.80634e+07 3.5642e+07 352 3.56179e+07 2.95785e+07 0.00328573 3.54102e+07 49.8537 0.00452087 0.995463 0 50.2458 GTEX-13113-5007-SM-793CD B1 7.6 Esophagus Esophagus - Mucosa 0006920 239 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6379 01/14/2015 TruSeq.v1 EXCLUDE 0.994033 542390 0.968407 0.995218 0.814452 23354 1 76 0.00321632 171 0 7.92962e+07 0.0313261 574925 7.96772e+07 1.16737e+07 23379 3.95183e+07 0 0.153954 0.995218 0.810558 7.92962e+07 0.00362987 1.70981e+07 1.31405e+07 1.72066e+07 183 1.72089e+07 1.44444e+07 0.00342285 1.71885e+07 49.9704 0.00721568 0.996404 0 50.1581 GTEX-13113-5010-SM-7RHFP B1 7.6 Esophagus Esophagus - Muscularis 0004648 241 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992833 357191 0.976181 0.994788 0.870951 22087 1 76 0.00261924 280 0 9.4469e+07 0.0235359 706327 9.4964e+07 9.24675e+06 22105 4.70512e+07 0 0.10523 0.994788 0.866412 9.4469e+07 0.00380111 2.03823e+07 1.22862e+07 2.06087e+07 276 2.05759e+07 1.96883e+07 0.00320902 2.05971e+07 50.0257 0.00743784 0.996743 0 50.2762 GTEX-13113-5013-SM-7SB7G B1 6.9 Breast Breast - Mammary Tissue 0008367 284 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991609 1.15112e+06 0.941869 0.99352 0.779138 23776 1 76 0.00289195 174 0 8.69486e+07 0.0578237 432453 8.75156e+07 9.59765e+06 23805 4.32945e+07 0 0.162731 0.99352 0.77409 8.69486e+07 0.00414164 1.82238e+07 4.14475e+07 1.86023e+07 198 1.85976e+07 1.4614e+07 0.00351559 1.84155e+07 49.754 0.00494144 0.995432 0 50.5139 GTEX-13113-5016-SM-7EPIP B1 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 297 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990594 486631 0.962295 0.992987 0.802034 23103 1 76 0.00332696 136 0 8.02098e+07 0.0374725 364906 8.07763e+07 1.08557e+07 23129 3.99512e+07 0 0.16026 0.992987 0.796409 8.02098e+07 0.0118664 1.73538e+07 1.66032e+07 1.74923e+07 140 1.75299e+07 1.38804e+07 0.00758641 1.75005e+07 49.958 0.00451749 0.995379 0 50.1988 GTEX-13113-5019-SM-7EPH2 B1 6.9 Muscle Muscle - Skeletal 0011907 304 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991597 341330 0.973722 0.993912 0.82559 22644 1 76 0.00327177 138 0 8.6685e+07 0.0259333 1.04368e+06 8.7216e+07 1.12166e+07 22665 4.31887e+07 0 0.148133 0.993912 0.820563 8.6685e+07 0.0116319 1.88953e+07 1.3073e+07 1.90725e+07 147 1.91437e+07 1.6363e+07 0.00744208 1.90067e+07 49.8205 0.0119666 0.996227 0 50.2334 GTEX-1313W-0004-SM-5DU5K C1 Blood Whole Blood 0013756 432 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1313W-0004-SM-7DRP8 C1 Blood Whole Blood 0013756 432 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1313W-0006-SM-5O9B1 C1 7.5 Blood Whole Blood 0013756 432 BP-42705 RNA isolation_PAXgene Blood RNA (Manual) 08/26/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.958026 386962 0.979228 0.961838 0.782888 17934 1 76 0.00230631 96 0 7.11885e+07 0.0196529 220157 7.4013e+07 1.1131e+07 17943 3.53434e+07 0 0.19634 0.961838 0.753012 7.11885e+07 0.00454655 1.66823e+07 1.12878e+08 1.66546e+07 113 1.6682e+07 1.76352e+07 0.00342199 1.69559e+07 50.4071 0.00297457 0.96565 0 49.9583 GTEX-1313W-0008-SM-5YYAP C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 620 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992756 719402 0.972011 0.994016 0.842715 21593 1 76 0.00228002 290 0 1.1202e+08 0.0276691 410175 1.12694e+08 4.93354e+06 21623 5.58089e+07 0 0.129297 0.994016 0.837672 1.1202e+08 0.00279345 2.49557e+07 2.11886e+07 2.50903e+07 281 2.50975e+07 2.83615e+07 0.00253641 2.51024e+07 50.0048 0.00363972 0.995275 0 50.1344 GTEX-1313W-0011-R10b-SM-5DUXA C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 434 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.985015 1.00125e+06 0.951442 0.989275 0.842601 23154 1 76 0.00208378 268 0 7.73727e+07 0.04801 2.77824e+06 7.82115e+07 8.02327e+06 23166 3.84249e+07 0 0.108841 0.989275 0.833564 7.73727e+07 0.00333512 1.6703e+07 2.5017e+07 1.67285e+07 257 1.67963e+07 1.03286e+07 0.00270676 1.69504e+07 50.2284 0.0355221 0.993535 0 50.038 GTEX-1313W-0011-R11a-SM-5DUXN C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 434 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987138 654498 0.943033 0.990126 0.766989 22542 1 76 0.00218094 130 0 6.41421e+07 0.0566008 953502 6.47817e+07 6.37492e+06 22560 3.18843e+07 0 0.176045 0.990126 0.759415 6.41421e+07 0.00329612 1.37208e+07 1.51111e+07 1.38031e+07 155 1.3845e+07 8.30348e+06 0.00273685 1.38623e+07 50.0311 0.0147187 0.993115 0 50.1497 GTEX-1313W-0011-R1b-SM-5EQ4A C1, A1 7.2 Brain Brain - Hippocampus 0001954 434 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991543 693596 0.960313 0.994196 0.848438 23449 1 76 0.00228868 281 0 8.63886e+07 0.0392833 5.15453e+06 8.6893e+07 1.04606e+07 23464 4.29813e+07 0 0.111875 0.994196 0.843514 8.63886e+07 0.00332507 1.89403e+07 2.25383e+07 1.89981e+07 288 1.88914e+07 1.13566e+07 0.00280549 1.92606e+07 50.4839 0.0593205 0.996848 0 50.0763 GTEX-1313W-0011-R2a-SM-5EGLF C1, A1 7 Brain Brain - Substantia nigra 0002038 434 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991807 737703 0.959332 0.994024 0.84883 23288 1 76 0.00214192 277 0 8.85696e+07 0.0402809 6.08266e+06 8.9102e+07 7.22157e+06 23303 4.40843e+07 0 0.110502 0.994024 0.843757 8.85696e+07 0.00311322 1.93855e+07 2.59231e+07 1.94265e+07 299 1.93808e+07 1.16476e+07 0.00262648 1.96144e+07 50.2995 0.0682662 0.996241 0 50.0528 GTEX-1313W-0011-R3a-SM-5EGLI C1, A1 7.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 434 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989189 702854 0.960076 0.991839 0.849181 23102 1 76 0.00214152 271 0 8.42539e+07 0.0393969 4.54736e+06 8.49472e+07 7.54137e+06 23115 4.19119e+07 0 0.110895 0.991839 0.842251 8.42539e+07 0.00310604 1.83454e+07 2.70883e+07 1.83301e+07 278 1.82433e+07 1.06838e+07 0.00262249 1.86421e+07 50.5406 0.0535316 0.99449 0 49.9792 GTEX-1313W-0011-R4b-SM-5KLZV C1, A1 6.9 Brain Brain - Amygdala 0001876 434 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986323 431263 0.964607 0.988857 0.8464 23395 1 76 0.00423192 269 0 8.58918e+07 0.0350872 6.39834e+06 8.68597e+07 3.86037e+06 23406 4.27178e+07 0 0.118206 0.988857 0.836969 8.58918e+07 0.00528924 1.85954e+07 2.2032e+07 1.89778e+07 269 1.88559e+07 9.08973e+06 0.00475923 1.8907e+07 50.0676 0.073663 0.991391 0 50.5089 GTEX-1313W-0011-R5b-SM-5L3EP C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 434 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988506 388730 0.961562 0.99214 0.835117 22622 1 76 0.00353575 153 0 6.72293e+07 0.0380477 3.44462e+06 6.77619e+07 6.85866e+06 22639 3.34231e+07 0 0.126445 0.99214 0.828553 6.72293e+07 0.00430169 1.46804e+07 1.81507e+07 1.4523e+07 183 1.45488e+07 7.91594e+06 0.00391732 1.48806e+07 50.5637 0.0508342 0.995775 0 49.7305 GTEX-1313W-0011-R6a-SM-5K7XO C1, A1 8.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 434 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990627 419200 0.956335 0.99301 0.82962 22993 1 76 0.00302587 153 0 6.52596e+07 0.0432116 2.84063e+06 6.5719e+07 1.14285e+07 23011 3.2481e+07 0 0.126715 0.99301 0.823821 6.52596e+07 0.0040851 1.41906e+07 1.56554e+07 1.41471e+07 172 1.41472e+07 8.14976e+06 0.00355422 1.43427e+07 50.343 0.0432239 0.995393 0 49.9233 GTEX-1313W-0011-R7b-SM-5DUWL C1, A1 8.9 Brain Brain - Putamen (basal ganglia) 0001874 434 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.991275 614397 0.956633 0.993888 0.841773 21831 1 76 0.00232442 156 0 6.21322e+07 0.043074 4.37732e+06 6.25143e+07 5.07084e+06 21839 3.09155e+07 0 0.11486 0.993888 0.836628 6.21322e+07 0.00359212 1.34678e+07 2.27745e+07 1.34195e+07 183 1.33683e+07 6.32694e+06 0.00295661 1.36684e+07 50.5549 0.0700211 0.996502 0 49.9101 GTEX-1313W-0011-R8a-SM-5DUVM C1, A1 6.8 Brain Brain - Hypothalamus 0001898 434 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988944 583381 0.955269 0.99154 0.836202 23544 1 76 0.00228251 204 0 7.05929e+07 0.0444122 4.47523e+06 7.11952e+07 6.28708e+06 23559 3.51233e+07 0 0.119067 0.99154 0.829128 7.05929e+07 0.00338326 1.53817e+07 1.81756e+07 1.54671e+07 230 1.53924e+07 8.57863e+06 0.00283144 1.56294e+07 50.3819 0.0628586 0.994136 0 50.1384 GTEX-1313W-0126-SM-5LZUN 1 C1 6 pieces, well trimmed, squamous epithelium measures ~50 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 618 690 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991629 329309 0.976827 0.993179 0.835126 23901 1 76 0.0025206 317 0 9.83043e+07 0.0228764 499964 9.89794e+07 4.77872e+06 23925 4.89308e+07 0 0.141701 0.993179 0.82943 9.83043e+07 0.00330015 2.13569e+07 1.05361e+07 2.15312e+07 299 2.15354e+07 1.81825e+07 0.00290977 2.14984e+07 49.9569 0.00505119 0.994728 0 50.2033 GTEX-1313W-0226-SM-5LZV7 0 C1 2 pieces, <10% is fibrous 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 622 686 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992108 215047 0.977346 0.993184 0.805576 22188 1 76 0.0026078 143 0 6.42675e+07 0.0223513 374017 6.47086e+07 3.12202e+06 22209 3.19977e+07 0 0.17177 0.993184 0.800085 6.42675e+07 0.0032855 1.42074e+07 5.90235e+06 1.43052e+07 152 1.43029e+07 1.03108e+07 0.00294628 1.42752e+07 49.9515 0.00578002 0.994259 0 50.1715 GTEX-1313W-0326-SM-5LZU5 1 C1 2 pieces, both with small attachment of fat (5-10%) 7.6 Nerve Nerve - Tibial 0001323 623 686 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990614 237959 0.971699 0.991988 0.787461 24056 1 76 0.00256469 222 0 8.45045e+07 0.0279857 356158 8.51871e+07 4.25744e+06 24089 4.20701e+07 0 0.184238 0.991988 0.781152 8.45045e+07 0.0032304 1.86449e+07 7.32611e+06 1.88214e+07 212 1.88281e+07 1.41273e+07 0.00289709 1.87486e+07 49.8942 0.00418089 0.993362 0 50.2355 GTEX-1313W-0526-SM-5P9FZ 1 C1 2 pieces, minimal internal fat 8.6 Muscle Muscle - Skeletal 0011907 635 675 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.993752 263279 0.98426 0.994134 0.880295 20187 1 76 0.0028003 270 0 1.01099e+08 0.0154782 1.30387e+06 1.01695e+08 3.28398e+06 20203 5.03864e+07 0 0.103965 0.994134 0.875131 1.01099e+08 0.00338414 2.1979e+07 1.13046e+07 2.21409e+07 266 2.21248e+07 2.34357e+07 0.00309211 2.20445e+07 49.909 0.0128213 0.994517 0 50.1835 GTEX-1313W-0626-SM-5EQ4H 1 C1 6 pieces, well trimmed, few sections include 5-10% internal fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 656 654 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.988637 365467 0.975956 0.99224 0.788537 21893 1 76 0.00214109 188 0 7.77069e+07 0.0238333 478409 7.83147e+07 1.0436e+07 21926 3.86113e+07 0 0.187419 0.99224 0.782418 7.77069e+07 0.00345357 1.69618e+07 1.05957e+07 1.71345e+07 193 1.71487e+07 1.14815e+07 0.00279495 1.72159e+07 50.0978 0.0061088 0.995842 0 50.2532 GTEX-1313W-0726-SM-5EGK1 2 C1 2 pieces 6 Thyroid Thyroid 0002046 659 652 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990131 243180 0.96545 0.992566 0.764849 23831 1 76 0.00192158 137 0 6.66797e+07 0.0342536 185394 6.71792e+07 5.69566e+06 23859 3.31496e+07 0 0.200601 0.992566 0.759163 6.66797e+07 0.00314995 1.4484e+07 7.75885e+06 1.46212e+07 148 1.46174e+07 1.12081e+07 0.00253426 1.46444e+07 50.0461 0.0027597 0.995 0 50.2355 GTEX-1313W-0826-SM-5EQ4T 1 C1 2 pieces, 50-60% fat, rest is dense fibrous stroma and ductal/lobular elements 6 Breast Breast - Mammary Tissue 0008367 663 648 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989002 283194 0.976756 0.992151 0.777902 23448 1 76 0.00215044 144 0 6.76005e+07 0.0229006 401175 6.81353e+07 8.43693e+06 23475 3.35824e+07 0 0.198854 0.992151 0.771796 6.76005e+07 0.0034152 1.48857e+07 7.727e+06 1.50226e+07 158 1.50293e+07 1.0615e+07 0.00278081 1.50848e+07 50.0922 0.00588792 0.9953 0 50.2288 GTEX-1313W-0926-SM-5EQ56 1 C1 2 pieces, some congestion and hemorrhage and many hemosiderin-laden macrophages, small focus of cartilage 6 Lung Lung 0008952 671 641 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991952 164743 0.977036 0.994074 0.791675 21889 1 76 0.00218712 119 0 5.46616e+07 0.0226584 448042 5.49875e+07 7.03197e+06 21904 2.71965e+07 0 0.18536 0.994074 0.786984 5.46616e+07 0.00305775 1.21106e+07 5.68911e+06 1.21944e+07 131 1.21648e+07 8.55963e+06 0.00262151 1.22532e+07 50.181 0.00814807 0.996197 0 50.1725 GTEX-1313W-1026-SM-5EQ5I 1 C1 6 pieces, well trimmed 7.4 Blood Vessel Artery - Aorta 0001496 672 640 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990292 327763 0.975977 0.992635 0.780234 21755 1 76 0.00216324 128 0 6.00586e+07 0.023619 180768 6.05042e+07 6.93965e+06 21771 2.98428e+07 0 0.195743 0.992635 0.774488 6.00586e+07 0.00334244 1.29723e+07 5.26458e+06 1.312e+07 135 1.31105e+07 1.07199e+07 0.00275145 1.31172e+07 50.0127 0.00298769 0.994978 0 50.283 GTEX-1313W-1126-SM-5EQ5U 1 C1 2 pieces 7.4 Heart Heart - Atrial Appendage 0006631 677 636 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990602 271823 0.979065 0.993604 0.816934 22594 1 76 0.00230001 155 0 7.46949e+07 0.0206437 1.53139e+06 7.51757e+07 9.35363e+06 22614 3.71512e+07 0 0.162131 0.993604 0.811709 7.46949e+07 0.00319216 1.61487e+07 1.03206e+07 1.61144e+07 185 1.61655e+07 1.2155e+07 0.00274474 1.62994e+07 50.2061 0.0203708 0.996606 0 49.9468 GTEX-1313W-1426-SM-5KLZU 0 C1 2 pieces 6.3 Heart Heart - Left Ventricle 0006566 683 631 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985618 281509 0.97999 0.988575 0.823317 23544 1 76 0.00447863 372 0 1.61215e+08 0.0198776 1.16677e+07 1.63078e+08 8.0524e+06 23570 8.01472e+07 0 0.156673 0.988575 0.813911 1.61215e+08 0.00578812 3.50005e+07 5.15947e+07 3.55991e+07 394 3.57132e+07 1.59785e+07 0.00513142 3.52857e+07 49.699 0.071547 0.991532 0 50.4239 GTEX-1313W-1626-SM-5J1OE 0 C1 2 pieces 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 688 628 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98469 231587 0.97443 0.986443 0.806754 24018 1 76 0.00418586 194 0 8.97986e+07 0.0252398 443591 9.10327e+07 5.64439e+06 24043 4.45674e+07 0 0.167676 0.986443 0.795818 8.97986e+07 0.00508645 1.97347e+07 9.59302e+06 1.97977e+07 208 1.98339e+07 1.4793e+07 0.00463535 1.98553e+07 50.027 0.00487288 0.988197 0 50.0796 GTEX-1313W-2726-SM-5P9IX 1 C1 2 pieces, corpora albicantia/fibrosa, numerous thick-walled vessels with amyloid-like material 7.1 Ovary Ovary 0000992 730 593 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990928 530743 0.950626 0.991365 0.732514 24152 1 76 0.00339485 170 0 8.82901e+07 0.0491086 134720 8.90591e+07 3.14324e+06 24194 4.39302e+07 0 0.218112 0.991365 0.726189 8.82901e+07 0.00371634 1.89324e+07 2.37706e+07 1.91236e+07 170 1.90299e+07 1.65942e+07 0.00355552 1.90853e+07 50.0727 0.0015127 0.991802 0 50.2512 GTEX-1313W-2826-SM-5P9G1 1 C1 2 pieces, myometrium only 6.4 Uterus Uterus 0000995 731 592 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987359 236919 0.96513 0.986862 0.741352 25247 1 76 0.00328679 217 0 1.0354e+08 0.0345819 484903 1.04918e+08 4.0507e+06 25294 5.14053e+07 0 0.223779 0.986862 0.731612 1.0354e+08 0.00404185 2.25884e+07 1.12646e+07 2.27053e+07 233 2.25841e+07 1.6433e+07 0.00366451 2.26773e+07 50.1029 0.00462172 0.986366 0 50.1291 GTEX-1313W-3026-SM-5LZUZ 1 C1 4 pieces, no evidence of hypoxic damage 7.2 Brain Brain - Cerebellum 0002037 738 586 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990967 261941 0.948044 0.992257 0.733688 23102 1 76 0.00284205 128 0 6.88388e+07 0.0515612 839713 6.93759e+07 3.53689e+06 23124 3.42626e+07 0 0.214356 0.992257 0.728007 6.88388e+07 0.00342075 1.48606e+07 1.13902e+07 1.4972e+07 148 1.5003e+07 9.19721e+06 0.00313102 1.4912e+07 49.8478 0.0121038 0.993548 0 50.1868 GTEX-1313W-3126-SM-5LZUI 1 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 740 585 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992574 234128 0.969968 0.99377 0.842493 22892 1 76 0.00270147 200 0 7.03357e+07 0.0296081 2.27636e+06 7.07767e+07 3.34493e+06 22904 3.50327e+07 0 0.127475 0.99377 0.837244 7.03357e+07 0.00334849 1.5506e+07 8.94157e+06 1.56061e+07 211 1.55732e+07 9.21375e+06 0.00302459 1.56091e+07 50.0575 0.0321625 0.994966 0 50.1609 GTEX-1313W-3226-SM-5LZUU 1 C1 2 pieces, focus of squamous nests 7.4 Pituitary Pituitary 0000007 741 585 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991456 264400 0.967959 0.992638 0.799128 24866 1 76 0.00266646 142 0 6.99619e+07 0.031744 233832 7.04808e+07 3.42176e+06 24897 3.48277e+07 0 0.168831 0.992638 0.793245 6.99619e+07 0.00341774 1.53433e+07 7.61089e+06 1.54707e+07 160 1.5491e+07 1.22027e+07 0.00304165 1.54037e+07 49.8587 0.00331767 0.99382 0 50.2067 GTEX-1314G-0003-SM-5DU4J B1 Blood Whole Blood 0013756 214 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1314G-0003-SM-7DRPN B1 Blood Whole Blood 0013756 214 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1314G-0005-SM-5NQ9O B1 8.2 Blood Whole Blood 0013756 214 BP-42705 RNA isolation_PAXgene Blood RNA (Manual) 08/26/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.942443 914704 0.967122 0.945288 0.801363 18526 1 76 0.00248892 115 0 1.01712e+08 0.0302972 192029 1.07599e+08 1.53681e+07 18528 5.04912e+07 0 0.165759 0.945288 0.757519 1.01712e+08 0.00605546 2.35261e+07 1.96093e+08 2.3821e+07 152 2.37742e+07 2.82067e+07 0.00426682 2.38857e+07 50.117 0.00178468 0.948133 0 50.3114 GTEX-1314G-0008-SM-5YY9K B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 469 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993252 488586 0.975889 0.994512 0.855627 20882 1 76 0.00225415 224 0 9.91305e+07 0.0238138 280603 9.96775e+07 4.39234e+06 20905 4.94014e+07 0 0.120262 0.994512 0.850932 9.91305e+07 0.00298741 2.2211e+07 1.64116e+07 2.23133e+07 255 2.23394e+07 2.60847e+07 0.00262031 2.23115e+07 49.9687 0.00281511 0.995772 0 50.1149 GTEX-1314G-0126-SM-5LZUL 0 B1 2 pieces; 5-20% internal fat 5.8 Heart Heart - Left Ventricle 0006566 309 927 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991293 205248 0.981313 0.992569 0.826658 21252 1 76 0.00277223 265 0 8.43018e+07 0.0185516 2.72481e+06 8.4933e+07 3.94258e+06 21269 4.20137e+07 0 0.154655 0.992569 0.820516 8.43018e+07 0.00339592 1.86138e+07 1.97711e+07 1.89384e+07 266 1.89293e+07 1.00609e+07 0.00308368 1.87104e+07 49.7093 0.0320819 0.993846 0 50.4323 GTEX-1314G-0826-SM-5BC6L 2 B1 6 pieces; chronic esophagitis, squamous epithelium largely sloughed 6.5 Esophagus Esophagus - Mucosa 0006920 393 843 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.987137 207415 0.967157 0.990914 0.733362 23873 1 76 0.00287411 117 0 5.48651e+07 0.0324225 246053 5.53682e+07 1.374e+07 23895 2.72323e+07 0 0.233795 0.990914 0.726699 5.48651e+07 0.00522942 1.19644e+07 6.90808e+06 1.21191e+07 122 1.21463e+07 7.99802e+06 0.00404728 1.21369e+07 49.9807 0.00444394 0.994691 0 50.3213 GTEX-1314G-1226-SM-5BC6D 1 B1 2 pieces; gynecomastoid changes; fat content varies from 10 to 60% in the 2 pieces 6.2 Breast Breast - Mammary Tissue 0008367 444 792 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985112 173038 0.97197 0.98985 0.79552 23252 1 76 0.0028083 138 0 6.45864e+07 0.0277313 389830 6.52486e+07 1.83042e+07 23277 3.20338e+07 0 0.17645 0.98985 0.787446 6.45864e+07 0.00546294 1.41323e+07 7.01257e+06 1.42735e+07 149 1.43109e+07 1.06769e+07 0.00412927 1.43871e+07 50.1328 0.00597453 0.994588 0 50.2484 GTEX-1314G-1326-SM-5BC6E 1 B1 6 pieces; well trimmed; <5% dermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 455 781 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.987385 216053 0.974149 0.991521 0.750654 23819 1 76 0.00276194 141 0 6.77148e+07 0.0256199 446061 6.82939e+07 1.69007e+07 23844 3.3632e+07 0 0.223495 0.991521 0.744289 6.77148e+07 0.00511201 1.48688e+07 8.02389e+06 1.49934e+07 145 1.50656e+07 1.05343e+07 0.00393207 1.50656e+07 49.9999 0.00653149 0.995657 0 50.2087 GTEX-1314G-1526-SM-5EGK2 0 B1 6 pieces; 3 have up to 10% subcutaneous fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 477 759 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.99025 224382 0.971248 0.992702 0.785966 24197 1 76 0.00195586 200 0 7.61232e+07 0.028515 257455 7.66828e+07 6.7129e+06 24235 3.7884e+07 0 0.185283 0.992702 0.78023 7.61232e+07 0.00292906 1.65849e+07 7.83158e+06 1.66779e+07 179 1.67109e+07 1.35321e+07 0.00244126 1.67261e+07 50.0228 0.0033574 0.995154 0 50.1398 GTEX-1314G-1626-SM-5EQ67 1 B1 2 pieces; neural & vascular elements make up 5% of 1 piece 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 492 744 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990244 314426 0.976298 0.993062 0.810919 22805 1 76 0.00203314 166 0 7.13639e+07 0.0233253 324417 7.18625e+07 8.81748e+06 22832 3.54899e+07 0 0.165379 0.993062 0.805292 7.13639e+07 0.00308491 1.56708e+07 6.75678e+06 1.58595e+07 165 1.58916e+07 1.32656e+07 0.00255754 1.58314e+07 49.9051 0.00451441 0.99588 0 50.2992 GTEX-1314G-1726-SM-5LZUX 1 B1 2 pieces; 5-10% internal fat 8.2 Muscle Muscle - Skeletal 0011907 518 718 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991761 185977 0.982762 0.992852 0.876078 19431 1 76 0.00232586 161 0 7.73172e+07 0.016962 546768 7.78738e+07 3.67199e+06 19439 3.85382e+07 0 0.106683 0.992852 0.869816 7.73172e+07 0.00290556 1.68462e+07 8.04360e+06 1.69491e+07 196 1.69253e+07 1.69266e+07 0.00261539 1.69455e+07 50.0298 0.0070212 0.993943 0 50.1523 GTEX-1314G-1826-SM-5LZVA 0 B1 2 pieces; 5 and 20% internal fat 6.1 Nerve Nerve - Tibial 0001323 503 733 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990701 152291 0.972109 0.991804 0.793344 22714 1 76 0.00251816 138 0 6.22397e+07 0.0276411 275721 6.27541e+07 3.16146e+06 22733 3.09755e+07 0 0.178765 0.991804 0.786841 6.22397e+07 0.00325152 1.37253e+07 5.39347e+06 1.38074e+07 148 1.37839e+07 1.00186e+07 0.00288443 1.38166e+07 50.0593 0.00439367 0.992906 0 50.1492 GTEX-1314G-1926-SM-5BC6F 1 B1 2 pieces; no lesions; no fat 7.3 Blood Vessel Artery - Tibial 0007610 511 725 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.986036 252218 0.97549 0.990972 0.840425 20319 1 76 0.00256151 136 0 5.85602e+07 0.0241131 308088 5.90937e+07 1.48521e+07 20326 2.90417e+07 0 0.135065 0.990972 0.832837 5.85602e+07 0.00527775 1.24698e+07 5.29484e+06 1.26226e+07 136 1.26663e+07 1.13947e+07 0.00391287 1.27014e+07 50.0691 0.00521355 0.995907 0 50.3044 GTEX-1314G-2026-SM-5LZUM 0 B1 3 pieces; 2 are excellently dissected; 3rd piece is fibroadipose tissue 8 Salivary Gland Minor Salivary Gland 0006330 526 710 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.98939 207683 0.970944 0.990631 0.772844 24134 1 76 0.00282717 141 0 7.21125e+07 0.0279101 210063 7.27945e+07 3.65506e+06 24167 3.58598e+07 0 0.1981 0.990631 0.765604 7.21125e+07 0.00342985 1.61166e+07 1.06432e+07 1.6229e+07 162 1.62653e+07 1.20802e+07 0.00312813 1.61686e+07 49.8509 0.0028857 0.991873 0 50.1737 GTEX-1314G-5001-SM-AN3XN B1 Heart Heart - Left Ventricle 0006566 336 ChIP-Seq GTEX-131XE-0004-SM-5GYA4 B1 Blood Whole Blood 0013756 -24 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131XE-0004-SM-7DRP4 B1 Blood Whole Blood 0013756 -24 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131XE-0006-SM-5P9F9 B1 6.9 Blood Whole Blood 0013756 -26 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.973139 929174 0.974105 0.974058 0.816179 19117 1 76 0.00317741 263 0 1.39948e+08 0.0246858 421319 1.43675e+08 4.99492e+06 19125 6.96533e+07 0 0.157926 0.974058 0.795006 1.39948e+08 0.00410836 3.22768e+07 2.23838e+08 3.32618e+07 263 3.31715e+07 3.84135e+07 0.00364245 3.25197e+07 49.5039 0.00293244 0.974978 0 50.7515 GTEX-131XE-0126-SM-5LZVC 1 B1 2 pieces 6.7 Thyroid Thyroid 0002046 168 685 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991952 205279 0.968099 0.993082 0.756882 23248 1 76 0.00274987 122 0 6.62769e+07 0.0316209 262686 6.67387e+07 3.32481e+06 23276 3.30049e+07 0 0.211216 0.993082 0.751646 6.62769e+07 0.00337655 1.4518e+07 6.84083e+06 1.46016e+07 138 1.4609e+07 1.12582e+07 0.00306285 1.4584e+07 49.9573 0.00393604 0.994211 0 50.1435 GTEX-131XE-0326-SM-5LZVO 1 B1 2 pieces; mild central degeneration 6.3 Liver Liver 0001114 173 680 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990456 216575 0.973451 0.991629 0.82305 21672 1 76 0.00289937 124 0 6.23558e+07 0.0260612 1.36987e+06 6.28821e+07 3.15846e+06 21688 3.1016e+07 0 0.150402 0.991629 0.81616 6.23558e+07 0.00356986 1.36514e+07 1.02589e+07 1.37043e+07 144 1.37143e+07 1.08582e+07 0.00323422 1.37158e+07 50.0028 0.0217847 0.992803 0 50.0966 GTEX-131XE-0426-SM-5IJF4 1 B1 2 pieces; spermatogenesis 6.3 Testis Testis 0000473 174 679 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986203 261508 0.92584 0.987875 0.725298 33178 1 76 0.00508988 147 0 8.20814e+07 0.073829 946392 8.30888e+07 5.4001e+06 33236 4.08183e+07 0 0.200542 0.987875 0.716505 8.20814e+07 0.00519022 1.69608e+07 1.19911e+07 1.70077e+07 145 1.70529e+07 1.3135e+07 0.00513996 1.70394e+07 49.9801 0.0113901 0.989548 0 50.0691 GTEX-131XE-0526-SM-5K7YT 1 B1 2 pieces; 20 & 30% fibrous content 7.4 Heart Heart - Atrial Appendage 0006631 176 677 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991745 111015 0.981731 0.994042 0.808038 20657 1 76 0.00324716 111 0 6.07128e+07 0.018022 2.77840e+06 6.10767e+07 1.14337e+07 20673 3.02314e+07 0 0.173693 0.994042 0.803224 6.07128e+07 0.0043092 1.30467e+07 6.9037e+06 1.30698e+07 128 1.3076e+07 1.04956e+07 0.00377695 1.31709e+07 50.1807 0.0454904 0.996339 0 50.0443 GTEX-131XE-0626-SM-5HL98 1 B1 2 pieces 6.7 Heart Heart - Left Ventricle 0006566 179 674 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991027 288583 0.977838 0.99404 0.857509 21108 1 76 0.00319318 197 0 7.79907e+07 0.0219725 3.54962e+06 7.84584e+07 7.23602e+06 21118 3.8811e+07 0 0.120328 0.99404 0.852399 7.79907e+07 0.00413835 1.70191e+07 1.40497e+07 1.71746e+07 216 1.71483e+07 1.16843e+07 0.00366433 1.72533e+07 50.1526 0.0452421 0.997053 0 50.2274 GTEX-131XE-0726-SM-5HL9K 1 B1 2 pieces; marked fibrosis and pigmented macrophages; 1 piece contains > 50% bronchus and large blood vessels 5.9 Lung Lung 0008952 184 669 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988433 277252 0.968047 0.991537 0.766123 24079 1 76 0.00267976 132 0 6.74172e+07 0.0316708 334570 6.79927e+07 6.16472e+06 24107 3.35116e+07 0 0.201924 0.991537 0.759639 6.74172e+07 0.00374163 1.4747e+07 7.10715e+06 1.48863e+07 147 1.49022e+07 1.04012e+07 0.00320903 1.49276e+07 50.0425 0.00492068 0.99464 0 50.2349 GTEX-131XE-0826-SM-5HL9W 1 B1 6 pieces; 4 pieces have full thickness elements with well preserved mucosa; 2 have no mucosa (in this section) 6.8 Colon Colon - Transverse 0001157 193 660 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988882 284578 0.967785 0.991628 0.783986 23854 1 76 0.00312859 147 0 7.1176e+07 0.031062 1.12954e+06 7.17768e+07 6.69735e+06 23877 3.53821e+07 0 0.183799 0.991628 0.777423 7.1176e+07 0.00399909 1.56325e+07 1.19162e+07 1.56521e+07 158 1.56742e+07 1.04513e+07 0.00356264 1.57899e+07 50.1839 0.0157368 0.994375 0 50.0314 GTEX-131XE-0926-SM-5HL7J 1 B1 6 pieces; several lymphoid nodules (delineated) in 3 pieces; all have muscularis propria (not target) 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 197 656 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989712 345908 0.967505 0.992737 0.794392 23313 1 76 0.00273949 162 0 7.67433e+07 0.0322632 1.17837e+06 7.73048e+07 7.03803e+06 23340 3.81661e+07 0 0.173113 0.992737 0.788622 7.67433e+07 0.00378232 1.64547e+07 1.11318e+07 1.6595e+07 183 1.65996e+07 1.09681e+07 0.00325932 1.66645e+07 50.0976 0.0152431 0.995762 0 50.2123 GTEX-131XE-1026-SM-5EGKE 0 B1 6 pieces; well dissected muscularis (target) 7.3 Colon Colon - Sigmoid 0001159 198 655 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989775 271633 0.973735 0.992652 0.822692 22344 1 76 0.00230695 212 0 8.25342e+07 0.0259923 1.1975e+06 8.31452e+07 7.67372e+06 22367 4.10527e+07 0 0.151042 0.992652 0.816647 8.25342e+07 0.00329112 1.76912e+07 8.35259e+06 1.78108e+07 221 1.78062e+07 1.40111e+07 0.00279761 1.7916e+07 50.1537 0.0144025 0.995528 0 50.1685 GTEX-131XE-1126-SM-5EGHW 1 B1 2 pieces 7.8 Spleen Spleen 0002106 203 650 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.982994 276014 0.958957 0.98819 0.727362 24043 1 76 0.00319417 110 0 5.83267e+07 0.0399261 299892 5.90238e+07 8.81852e+06 24068 2.8904e+07 0 0.231594 0.98819 0.718772 5.83267e+07 0.00644965 1.27066e+07 1.01576e+07 1.28205e+07 115 1.29299e+07 8.8407e+06 0.00481335 1.28864e+07 49.9157 0.00508087 0.993385 0 50.2231 GTEX-131XE-1226-SM-5EGKF 1 B1 6 pieces; well dissected muscularis 7.4 Esophagus Esophagus - Muscularis 0004648 206 647 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990931 242126 0.971739 0.993273 0.812386 22040 1 76 0.00235182 137 0 6.52241e+07 0.0280273 1.08986e+06 6.56659e+07 5.21709e+06 22061 3.24509e+07 0 0.159353 0.993273 0.806921 6.52241e+07 0.00346808 1.39949e+07 6.39472e+06 1.41258e+07 153 1.41011e+07 1.0415e+07 0.00290863 1.41619e+07 50.1076 0.0165971 0.995614 0 50.2327 GTEX-131XE-1426-SM-5HL7V 1 B1 2 pieces; esophageal mucosa NOT prostate 8.5 Esophagus Esophagus - Mucosa 0006920 211 642 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988719 282028 0.971238 0.9919 0.787371 22642 1 76 0.00246571 150 0 6.9366e+07 0.0284252 490834 6.99324e+07 6.45558e+06 22657 3.44942e+07 0 0.183867 0.9919 0.780994 6.9366e+07 0.00345023 1.54595e+07 1.23826e+07 1.55447e+07 148 1.55902e+07 1.30868e+07 0.00295639 1.56279e+07 50.0603 0.00701869 0.995082 0 50.1374 GTEX-131XE-1526-SM-5KM1A 1 B1 5 pieces; well dissected muscularis 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 213 640 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987407 170342 0.971382 0.989946 0.800472 22738 1 76 0.00418861 159 0 7.9036e+07 0.0283175 676971 7.98387e+07 3.58651e+06 22761 3.92824e+07 0 0.17091 0.989946 0.792424 7.9036e+07 0.00541125 1.70096e+07 6.46703e+06 1.71982e+07 165 1.7208e+07 1.33506e+07 0.00479836 1.71911e+07 49.9755 0.00847923 0.992486 0 50.2758 GTEX-131XE-1626-SM-5K7VO 1 B1 6 pieces; well trimmed, no intradermal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 217 636 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.984458 218188 0.971273 0.986841 0.799288 24567 1 76 0.00479389 181 0 8.87611e+07 0.0284592 720819 8.99446e+07 6.02519e+06 24595 4.41199e+07 0 0.171985 0.986841 0.78877 8.87611e+07 0.0053524 1.9347e+07 9.88825e+06 1.96085e+07 185 1.96101e+07 1.49709e+07 0.00507247 1.95508e+07 49.9242 0.00801403 0.989224 0 50.3356 GTEX-131XE-1926-SM-5IFER 1 B1 2 pieces; well preserved with numerous islets; <10% internal fat 7.4 Pancreas Pancreas 0001150 220 633 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989368 270486 0.976434 0.992542 0.807922 22925 1 76 0.00260378 137 0 9.26842e+07 0.0233835 504187 9.33807e+07 1.13758e+07 22950 4.60983e+07 0 0.168512 0.992542 0.801897 9.26842e+07 0.00399377 2.10759e+07 1.98019e+07 2.13013e+07 156 2.13492e+07 2.27542e+07 0.00329655 2.13179e+07 49.9633 0.00539927 0.995716 0 50.2659 GTEX-131XE-2026-SM-5LZW1 1 B1 2 pieces 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 224 629 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991303 224714 0.97943 0.992796 0.835137 22178 1 76 0.00280612 142 0 6.88956e+07 0.0202609 454199 6.93955e+07 3.34952e+06 22195 3.42896e+07 0 0.144293 0.992796 0.829121 6.88956e+07 0.00360419 1.5204e+07 5.80446e+06 1.52915e+07 160 1.52948e+07 1.24193e+07 0.00320455 1.52995e+07 50.0076 0.00654508 0.994289 0 50.1434 GTEX-131XE-2226-SM-5PNYX 1 B1 6 pieces; only muscle present, no mucosa 6.2 Stomach Stomach 0000945 229 624 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990825 327536 0.964816 0.991542 0.8011 22823 1 76 0.0035643 161 0 7.8677e+07 0.0349246 1.22167e+06 7.93481e+07 2.26205e+06 22845 3.91826e+07 0 0.163716 0.991542 0.794324 7.8677e+07 0.00402323 1.69281e+07 1.34815e+07 1.71557e+07 176 1.70428e+07 1.25251e+07 0.0037936 1.70973e+07 50.0798 0.0153964 0.99226 0 50.3339 GTEX-131XE-2326-SM-5PNZ2 1 B1 6 pieces; well dissected 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 240 613 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991546 254537 0.973916 0.992117 0.840603 22002 1 76 0.00345171 183 0 7.35439e+07 0.0258023 352692 7.41282e+07 2.21248e+06 22022 3.661e+07 0 0.133314 0.992117 0.833976 7.35439e+07 0.00399742 1.60059e+07 8.99969e+06 1.60944e+07 169 1.60152e+07 1.38982e+07 0.00372441 1.61344e+07 50.1854 0.00475786 0.992687 0 50.1379 GTEX-131XE-2426-SM-5EQ5V 1 B1 2 pieces 8 Adipose Tissue Adipose - Subcutaneous 0002190 243 610 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990014 236467 0.975676 0.993066 0.807719 22255 1 76 0.002274 134 0 6.23557e+07 0.0239938 292579 6.27911e+07 7.64865e+06 22273 3.10107e+07 0 0.167956 0.993066 0.802118 6.23557e+07 0.00328125 1.36665e+07 5.78535e+06 1.37995e+07 139 1.38377e+07 1.18105e+07 0.00277608 1.38091e+07 49.9482 0.00465956 0.996117 0 50.242 GTEX-131XE-2526-SM-5EQ57 0 B1 2 pieces; 10% external; fat 7.8 Nerve Nerve - Tibial 0001323 246 607 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990795 261091 0.973404 0.99341 0.764572 23073 1 76 0.00231341 133 0 6.23265e+07 0.0262978 165101 6.27399e+07 8.09090e+06 23097 3.10008e+07 0 0.208833 0.99341 0.759533 6.23265e+07 0.00332209 1.36794e+07 5.44797e+06 1.38484e+07 135 1.38698e+07 1.07686e+07 0.00281642 1.38124e+07 49.8964 0.00263152 0.996026 0 50.3068 GTEX-131XE-2626-SM-5PNYY 1 B1 2 pieces; well trimmed; no external fat 7 Blood Vessel Artery - Tibial 0007610 247 606 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.98872 317065 0.973038 0.989713 0.830223 22545 1 76 0.00333821 207 0 9.55231e+07 0.0265714 472049 9.6516e+07 3.00468e+06 22573 4.75234e+07 0 0.142815 0.989713 0.821682 9.55231e+07 0.00399044 2.05357e+07 1.01693e+07 2.07317e+07 218 2.06368e+07 1.87704e+07 0.003664 2.07312e+07 50.1142 0.00489089 0.990706 0 50.2375 GTEX-131XE-2726-SM-5P9G7 1 B1 2 pieces; <10% internal fat 8.2 Muscle Muscle - Skeletal 0011907 248 605 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.989134 318961 0.983479 0.988731 0.876105 19723 1 76 0.0037046 189 0 9.47331e+07 0.0162878 1.5627e+06 9.58128e+07 3.93254e+06 19733 4.70605e+07 0 0.107374 0.988731 0.866233 9.47331e+07 0.00459315 2.05314e+07 1.1826e+07 2.07242e+07 210 2.06015e+07 1.89228e+07 0.00414906 2.06288e+07 50.0332 0.01631 0.988328 0 50.2337 GTEX-131XE-5003-SM-AN3XU B1 Heart Heart - Left Ventricle 0006566 186 ChIP-Seq GTEX-131XE-5013-SM-AN3XX B1 Muscle Muscle - Skeletal 0011907 249 ChIP-Seq GTEX-131XF-0004-SM-5DU3L B1 Blood Whole Blood 0013756 -102 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131XF-0004-SM-7DRPB B1 Blood Whole Blood 0013756 -102 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131XF-0006-SM-5P9HK B1 6.5 Blood Whole Blood 0013756 -102 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.945037 878791 0.966811 0.945838 0.81307 17553 1 76 0.00345142 146 0 1.0756e+08 0.032342 155044 1.13719e+08 3.77268e+06 17560 5.35689e+07 0 0.153741 0.945838 0.769033 1.0756e+08 0.00407718 2.45762e+07 1.52521e+08 2.49387e+07 171 2.49262e+07 2.83994e+07 0.00376403 2.46992e+07 49.7714 0.0013634 0.94664 0 50.366 GTEX-131XF-0008-SM-664MH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 408 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993312 556899 0.977052 0.993988 0.861858 21278 1 76 0.00209957 291 0 1.18133e+08 0.0226324 469442 1.18848e+08 7.19641e+06 21298 5.88471e+07 0 0.115194 0.993988 0.856677 1.18133e+08 0.00284985 2.66658e+07 1.8031e+07 2.67544e+07 300 2.67011e+07 3.11554e+07 0.00247446 2.68057e+07 50.0977 0.00394994 0.994664 0 50.0829 GTEX-131XF-0126-SM-5DUVF 1 B1 2 pieces; cortex; 10% internal and external fat 7.7 Adrenal Gland Adrenal Gland 0002369 138 1366 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989138 233381 0.978738 0.992217 0.83042 21394 1 76 0.00261233 129 0 6.47e+07 0.0209778 1.4799e+06 6.52075e+07 6.01657e+06 21408 3.21792e+07 0 0.148318 0.992217 0.823957 6.47e+07 0.00376718 1.41054e+07 1.04202e+07 1.40087e+07 159 1.40015e+07 9.34339e+06 0.00318796 1.42834e+07 50.4984 0.0226952 0.995296 0 49.828 GTEX-131XF-0326-SM-5DUVR 1 B1 2 pieces; 5% of 1 piece contains a fibrous scar consistent with old infarct 7.9 Heart Heart - Left Ventricle 0006566 157 1347 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.988622 200048 0.984224 0.992059 0.842318 20091 1 76 0.00276194 123 0 6.45268e+07 0.0155548 1.44307e+06 6.50433e+07 6.07996e+06 20104 3.20871e+07 0 0.141906 0.992059 0.83563 6.45268e+07 0.00391481 1.39758e+07 1.64484e+07 1.36524e+07 155 1.36512e+07 9.91358e+06 0.00333638 1.416e+07 50.9148 0.0221863 0.995497 0 49.4147 GTEX-131XF-0426-SM-5HL7U 1 B1 2 pieces; 50% & 20% internal fat 7.7 Heart Heart - Atrial Appendage 0006631 180 1324 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991336 331247 0.974193 0.993561 0.828344 20964 1 76 0.00270145 154 0 7.188e+07 0.0255382 1.60993e+06 7.23459e+07 5.79079e+06 20974 3.57954e+07 0 0.145848 0.993561 0.82301 7.188e+07 0.00353714 1.49002e+07 1.6348e+07 1.50252e+07 173 1.48914e+07 1.13003e+07 0.00311836 1.51673e+07 50.4589 0.0222533 0.995785 0 50.2088 GTEX-131XF-0526-SM-5HL87 0 B1 2 pieces; mildly sclerotic artery, diameter 1.5mm. Most of specimen is external fat and 1 large (1.7 sq mm) piece of myocardium. Artery comprises <40% of sampled area. 7.4 Blood Vessel Artery - Coronary 0001621 180 1324 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991087 334056 0.970889 0.993412 0.82871 23145 1 76 0.002135 167 0 7.959e+07 0.0287811 361006 8.01179e+07 7.023e+06 23165 3.96166e+07 0 0.142178 0.993412 0.82325 7.959e+07 0.00305009 1.71663e+07 9.27898e+06 1.72466e+07 193 1.72332e+07 1.50966e+07 0.00259147 1.73569e+07 50.1788 0.00450594 0.995736 0 50.1167 GTEX-131XF-0626-SM-5GIDS 1 B1 6 pieces; mild plaques; well trimmed 7.2 Blood Vessel Artery - Aorta 0001496 187 1317 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990935 245367 0.975608 0.993377 0.850947 21483 1 76 0.00264803 163 0 7.4533e+07 0.0240203 255851 7.50299e+07 8.92818e+06 21492 3.70863e+07 0 0.124661 0.993377 0.845311 7.4533e+07 0.0035216 1.59891e+07 6.57874e+06 1.61286e+07 175 1.61219e+07 1.43044e+07 0.00308374 1.61748e+07 50.0819 0.00340999 0.995819 0 50.2172 GTEX-131XF-0726-SM-5GIE5 1 B1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 199 1305 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.988418 219575 0.978067 0.99134 0.848273 21724 1 76 0.00291645 140 0 6.65916e+07 0.0216362 506997 6.71734e+07 8.07981e+06 21735 3.31199e+07 0 0.129794 0.99134 0.840927 6.65916e+07 0.0038805 1.46167e+07 6.48071e+06 1.47218e+07 157 1.47188e+07 1.17668e+07 0.00339706 1.48053e+07 50.1465 0.00754759 0.994263 0 50.1792 GTEX-131XF-0826-SM-5GICG 1 B1 6 pieces; well preserved, well dissected mucosa 9.5 Esophagus Esophagus - Mucosa 0006920 202 1302 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4796 02/27/2014 TruSeq.v1 RNASEQ 0.990163 305425 0.977132 0.992214 0.82894 22745 1 76 0.00287269 214 0 8.79507e+07 0.0225342 429281 8.86409e+07 1.12412e+07 22763 4.37901e+07 0 0.148192 0.992214 0.822486 8.79507e+07 0.00337197 1.97728e+07 1.3781e+07 1.97638e+07 233 1.98217e+07 1.7884e+07 0.00312181 1.9886e+07 50.0809 0.00484293 0.994266 0 49.9886 GTEX-131XF-0926-SM-5BC69 0 B1 6 pieces; well preserved, well dissected 8.4 Esophagus Esophagus - Muscularis 0004648 204 1300 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.989588 359227 0.976042 0.992996 0.830512 22067 1 76 0.00286563 218 0 8.4306e+07 0.02367 595786 8.49006e+07 2.28822e+07 22079 4.19128e+07 0 0.145529 0.992996 0.824696 8.4306e+07 0.0045986 1.79359e+07 9.0034e+06 1.81227e+07 212 1.81453e+07 1.4538e+07 0.00372914 1.8177e+07 50.0437 0.00701745 0.996405 0 50.2591 GTEX-131XF-1026-SM-5BC6A 1 B1 2 pieces; bronchi comprise 10% of each piece 6.9 Lung Lung 0008952 238 1266 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988408 225770 0.972627 0.992016 0.819788 23110 1 76 0.00308838 139 0 6.52808e+07 0.0269643 452238 6.58063e+07 1.68173e+07 23132 3.24448e+07 0 0.152839 0.992016 0.813242 6.52808e+07 0.00532129 1.42961e+07 7.26596e+06 1.44156e+07 151 1.4446e+07 1.04119e+07 0.00420078 1.44848e+07 50.0671 0.00687226 0.995623 0 50.2081 GTEX-131XF-1126-SM-5HL8J 1 B1 6 pieces; 10% extraneous fibrofatty tissue 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 234 1270 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989383 223141 0.975038 0.99235 0.832431 21242 1 76 0.00237704 135 0 5.92401e+07 0.0246832 472636 5.96968e+07 5.49002e+06 21257 2.94687e+07 0 0.142608 0.99235 0.826062 5.92401e+07 0.00348857 1.26666e+07 6.90496e+06 1.27793e+07 141 1.27747e+07 9.93778e+06 0.00293114 1.2833e+07 50.1138 0.00791727 0.995316 0 50.2213 GTEX-131XF-1226-SM-5HL8V 1 B1 6 pieces; all with mucosa, 3 with small amounts of muscularis propria 6.9 Stomach Stomach 0000945 242 1262 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.983897 308991 0.976399 0.986855 0.846167 22144 1 76 0.00266671 243 0 7.09629e+07 0.0230917 645460 7.19082e+07 7.07226e+06 22159 3.52878e+07 0 0.130232 0.986855 0.835045 7.09629e+07 0.00379653 1.5924e+07 7.08262e+07 1.63015e+07 182 1.63449e+07 1.69337e+07 0.00322993 1.60831e+07 49.5964 0.00897617 0.989814 0 50.5857 GTEX-131XF-1326-SM-5GCMQ 1 B1 4 pieces; several lymphoid nodules (delineated) in well preserved mucosa 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 253 1251 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984184 272583 0.970777 0.989061 0.790063 24508 1 76 0.00299917 277 0 9.12457e+07 0.0284221 776010 9.22549e+07 8.41135e+06 24541 4.52667e+07 0 0.180714 0.989061 0.78142 9.12457e+07 0.00424121 1.98617e+07 1.47974e+07 1.99641e+07 256 2.00258e+07 1.32704e+07 0.00361713 2.01994e+07 50.2158 0.00841158 0.993937 0 50.1285 GTEX-131XF-1426-SM-5BC68 1 B1 2 pieces; 30% internal fat 6.3 Pancreas Pancreas 0001150 246 1258 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985186 358140 0.973544 0.989995 0.820816 21742 1 76 0.00299626 109 0 6.60818e+07 0.0261773 210321 6.67497e+07 1.78297e+07 21761 3.27806e+07 0 0.152729 0.989995 0.812603 6.60818e+07 0.00564453 1.50048e+07 2.28289e+07 1.50843e+07 119 1.51241e+07 1.69606e+07 0.00431397 1.52802e+07 50.2567 0.00315089 0.994803 0 50.1321 GTEX-131XF-1826-SM-5EGKG 1 B1 2 pieces; several small lymphoid aggregates that could represent lymphocytic [Hashimoto] thyroiditis 6.9 Thyroid Thyroid 0002046 278 1226 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989066 252524 0.964434 0.991943 0.752097 23452 1 76 0.00237524 118 0 5.97844e+07 0.0344981 163032 6.027e+07 5.28579e+06 23482 2.97038e+07 0 0.212337 0.991943 0.746038 5.97844e+07 0.00346707 1.29821e+07 7.22927e+06 1.30661e+07 127 1.31032e+07 9.66207e+06 0.00291957 1.31046e+07 50.0027 0.00270503 0.994821 0 50.1612 GTEX-131XF-1926-SM-5DUW4 1 B1 2 pieces; mostly fibromuscular stroma 6 Prostate Prostate 0002367 303 1201 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.98863 198293 0.964162 0.992118 0.775094 23121 1 76 0.00226804 119 0 5.34366e+07 0.0356084 523328 5.38612e+07 4.46258e+06 23139 2.65467e+07 0 0.189068 0.992118 0.768985 5.34366e+07 0.00361192 1.14698e+07 5.59416e+06 1.14742e+07 130 1.14637e+07 7.08467e+06 0.00293762 1.16535e+07 50.4104 0.00971624 0.995605 0 50.0094 GTEX-131XF-2026-SM-5DUWG 1 B1 2 pieces; mostly hyalinized tubules with Leydig cell hyperplasia; virtually no normal spermatogenesis 6.3 Testis Testis 0000473 313 1191 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.98949 191883 0.967005 0.9919 0.743364 24135 1 76 0.00229302 112 0 5.66001e+07 0.0327468 328244 5.70623e+07 5.23418e+06 24168 2.81641e+07 0 0.223641 0.9919 0.737343 5.66001e+07 0.00337149 1.23805e+07 6.15399e+06 1.24205e+07 122 1.24441e+07 8.44424e+06 0.00283094 1.2484e+07 50.08 0.00575238 0.99431 0 50.0807 GTEX-131XF-2126-SM-5DUWS 0 B1 6 pieces; 10% intradermal fat; well trimmed 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 380 1124 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.98867 198718 0.97753 0.99142 0.837151 22084 1 76 0.00212977 163 0 6.47201e+07 0.0222088 426858 6.52802e+07 5.84864e+06 22102 3.22028e+07 0 0.140379 0.99142 0.829968 6.47201e+07 0.0032659 1.406e+07 7.12194e+06 1.41305e+07 154 1.416e+07 1.22393e+07 0.00269626 1.41947e+07 50.0613 0.00653885 0.99417 0 50.1251 GTEX-131XF-2226-SM-5EQKG 0 B1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 368 1136 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990183 265128 0.973665 0.992585 0.795373 22928 1 76 0.00227919 173 0 8.32813e+07 0.0260609 429993 8.39034e+07 1.13707e+07 22953 4.14374e+07 0 0.178292 0.992585 0.789476 8.32813e+07 0.00347848 1.80772e+07 8.32978e+06 1.82211e+07 201 1.81982e+07 1.3655e+07 0.00287738 1.82937e+07 50.1308 0.00512486 0.994988 0 50.1982 GTEX-131XF-2326-SM-5BC6B 0 B1 2 pieces; 10% internal fat 7.9 Muscle Muscle - Skeletal 0011907 400 1104 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.988979 336480 0.979881 0.992726 0.860917 19269 1 76 0.00298556 131 0 5.94783e+07 0.0199293 794628 5.99142e+07 1.47217e+07 19275 2.95585e+07 0 0.118964 0.992726 0.854654 5.94783e+07 0.00526497 1.28234e+07 7.71797e+06 1.28856e+07 141 1.29062e+07 1.06989e+07 0.00412096 1.29986e+07 50.1784 0.0132628 0.996473 0 50.121 GTEX-131XF-2426-SM-5BC6C 1 B1 4 pieces; 6.6 Nerve Nerve - Tibial 0001323 388 1116 BP-43916 RNA Extraction from Paxgene-derived Lysate Plate Based 09/24/2013 LCSET-4455 01/18/2014 TruSeq.v1 RNASEQ 0.985509 312073 0.962982 0.990277 0.737418 24133 1 76 0.00285031 175 0 7.63779e+07 0.0367286 237468 7.71278e+07 2.15927e+07 24175 3.78823e+07 0 0.225563 0.990277 0.730248 7.63779e+07 0.00526277 1.65219e+07 8.47003e+06 1.67447e+07 166 1.68202e+07 1.1294e+07 0.00405073 1.67924e+07 49.9586 0.00307889 0.995045 0 50.3349 GTEX-131XF-2526-SM-5EQ68 1 B1 4 pieces; mural calcifications; well trimmed 7.9 Blood Vessel Artery - Tibial 0007610 388 1116 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990229 323136 0.976387 0.993186 0.844231 21187 1 76 0.00199364 145 0 6.88773e+07 0.0231908 245051 6.93499e+07 8.96768e+06 21198 3.42387e+07 0 0.132156 0.993186 0.838478 6.88773e+07 0.00310163 1.46127e+07 5.37356e+06 1.48097e+07 159 1.47999e+07 1.38752e+07 0.00254598 1.48193e+07 50.0327 0.00353355 0.996142 0 50.3348 GTEX-131XF-2626-SM-5EQ6K 1 B1 6 pieces; generally well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 410 1094 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990649 303292 0.970075 0.99302 0.793828 22656 1 76 0.00229129 162 0 6.85739e+07 0.0297067 549472 6.90559e+07 8.60304e+06 22675 3.41178e+07 0 0.176248 0.99302 0.788286 6.85739e+07 0.003361 1.49943e+07 9.13476e+06 1.5019e+07 159 1.50078e+07 1.12083e+07 0.00282487 1.51606e+07 50.2531 0.00795691 0.99539 0 50.041 GTEX-131XF-2826-SM-5EGKH 0 B1 3 pieces; small amount of adherent skin and muscle annotated, otherwise good glandular components 7.5 Salivary Gland Minor Salivary Gland 0006330 418 1086 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988276 318529 0.970949 0.991151 0.792232 24614 1 76 0.00255405 206 0 8.18957e+07 0.0279947 504057 8.26268e+07 7.48892e+06 24649 4.06928e+07 0 0.178717 0.991151 0.785221 8.18957e+07 0.00347128 1.78628e+07 1.11903e+07 1.79976e+07 205 1.80382e+07 1.34449e+07 0.00301133 1.80356e+07 49.9965 0.0061004 0.994026 0 50.188 GTEX-131XF-5001-SM-7DHLY B1 8 Heart Heart - Left Ventricle 0006566 157 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992437 282003 0.978836 0.993777 0.847175 20500 1 76 0.00403655 152 0 7.59726e+07 0.0208459 1.12551e+06 7.64483e+07 5.78595e+06 20516 3.78491e+07 0 0.131662 0.993777 0.841903 7.59726e+07 0.00565414 1.64775e+07 1.423e+07 1.66209e+07 168 1.6631e+07 1.35667e+07 0.00484425 1.65491e+07 49.8767 0.0147225 0.995117 0 50.2167 GTEX-131XF-5001-SM-AN3XR B1 Heart Heart - Left Ventricle 0006566 157 ChIP-Seq GTEX-131XF-5004-SM-79OMG B1 6.6 Esophagus Esophagus - Mucosa 0006920 208 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.992917 294145 0.97581 0.993364 0.860417 21127 1 76 0.00309088 139 0 6.57959e+07 0.0239551 288705 6.62354e+07 3.4933e+06 21140 3.28052e+07 0 0.115393 0.993364 0.854707 6.57959e+07 0.00435742 1.47691e+07 1.18004e+07 1.49045e+07 147 1.49062e+07 1.40313e+07 0.00372387 1.47983e+07 49.8183 0.00435877 0.99381 0 50.2281 GTEX-131XF-5007-SM-7PC34 B1 7.4 Esophagus Esophagus - Muscularis 0004648 210 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.99021 682518 0.971693 0.99263 0.844329 22544 1 76 0.0034415 278 0 1.09491e+08 0.0281004 969648 1.10303e+08 1.70023e+07 22564 5.44298e+07 0 0.127364 0.99263 0.838105 1.09491e+08 0.00475405 2.29487e+07 1.69171e+07 2.32371e+07 319 2.32673e+07 1.90144e+07 0.00409617 2.31652e+07 49.8901 0.00879073 0.995049 0 50.3123 GTEX-131XF-5010-SM-AN3XQ B1 Lung Lung 0008952 238 ChIP-Seq GTEX-131XF-5013-SM-7EWFI B1 6.4 Prostate Prostate 0002367 303 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991563 240946 0.965501 0.993512 0.769806 23915 1 76 0.0024736 135 0 6.36386e+07 0.0342622 387535 6.40542e+07 5.50477e+06 23947 3.16724e+07 0 0.195695 0.993512 0.764811 6.36386e+07 0.0036602 1.39125e+07 8.0322e+06 1.39941e+07 145 1.39996e+07 1.03148e+07 0.00306574 1.40315e+07 50.0568 0.00605012 0.99546 0 50.1463 GTEX-131XF-5016-SM-7MGWE B1 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 383 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991139 346299 0.966054 0.992956 0.842106 22812 1 76 0.0027323 153 0 6.60179e+07 0.0337526 468111 6.64862e+07 5.12396e+06 22825 3.28856e+07 0 0.123948 0.992956 0.836175 6.60179e+07 0.00353363 1.42694e+07 1.24539e+07 1.43869e+07 156 1.43771e+07 1.2535e+07 0.00313223 1.44027e+07 50.0444 0.00704072 0.994774 0 50.205 GTEX-131XG-0003-SM-5DU5J B1 Blood Whole Blood 0013756 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131XG-0003-SM-7DRPV B1 Blood Whole Blood 0013756 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131XG-0006-SM-5O9CE B1 7.2 Blood Whole Blood 0013756 -123 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986239 791054 0.964455 0.988873 0.819887 19923 1 76 0.00365614 196 0 1.05241e+08 0.0352105 292126 1.06425e+08 4.45612e+06 19935 5.22998e+07 0 0.144568 0.988873 0.810764 1.05241e+08 0.00482519 2.34205e+07 6.75409e+07 2.37422e+07 208 2.38481e+07 2.34811e+07 0.00423911 2.35995e+07 49.738 0.0027449 0.991507 0 50.341 GTEX-131XG-0008-SM-5YY9O B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 256 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993014 564552 0.975925 0.994085 0.850276 20604 1 76 0.00227756 291 0 1.02849e+08 0.0237561 346731 1.03461e+08 4.79893e+06 20624 5.12498e+07 0 0.125649 0.994085 0.845246 1.02849e+08 0.0027928 2.30816e+07 1.67728e+07 2.31113e+07 269 2.31204e+07 2.59064e+07 0.0025349 2.31874e+07 50.0723 0.00335132 0.995156 0 50.0322 GTEX-131XG-0126-SM-5K7UJ 1 B1 2 pieces, minimal fibrovascular tissue 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 87 700 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987843 221564 0.977863 0.990302 0.84989 22946 1 76 0.00436558 209 0 8.86653e+07 0.0218221 582322 8.95335e+07 5.78623e+06 22969 4.40905e+07 0 0.127973 0.990302 0.841648 8.86653e+07 0.00495817 1.94541e+07 8.19855e+06 1.96106e+07 207 1.96191e+07 1.68122e+07 0.00466114 1.96511e+07 50.0408 0.00650395 0.992762 0 50.2004 GTEX-131XG-0226-SM-5IFG1 1 B1 2 pieces, mild chronic inflammation, possible autoimmune thyroiditis 6.8 Thyroid Thyroid 0002046 90 697 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.991241 174423 0.968667 0.993568 0.765233 23376 1 76 0.0022253 137 0 6.96571e+07 0.0310656 261148 7.0108e+07 7.08777e+06 23416 3.4675e+07 0 0.203433 0.993568 0.760312 6.96571e+07 0.00355827 1.52399e+07 6.76525e+06 1.53421e+07 155 1.53156e+07 1.07869e+07 0.00289023 1.54182e+07 50.1669 0.00372494 0.995895 0 50.1671 GTEX-131XG-0326-SM-5L3DX 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~40-50 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 101 686 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986945 300151 0.970397 0.991164 0.806826 22548 1 76 0.00322559 177 0 7.11067e+07 0.0294213 690206 7.17406e+07 7.53044e+06 22563 3.53236e+07 0 0.16357 0.991164 0.799697 7.11067e+07 0.00445559 1.56349e+07 1.06517e+07 1.56374e+07 166 1.56897e+07 1.16499e+07 0.00383797 1.5863e+07 50.2746 0.00962086 0.995383 0 50.004 GTEX-131XG-0426-SM-5IFGD 1 B1 2 pieces, minimal congestion 7 Spleen Spleen 0002106 102 685 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990283 206312 0.966527 0.992682 0.788394 23840 1 76 0.0025238 158 0 7.2568e+07 0.0326785 254562 7.31029e+07 7.99096e+06 23875 3.61004e+07 0 0.178133 0.992682 0.782625 7.2568e+07 0.00381391 1.59462e+07 9.23789e+06 1.60393e+07 166 1.6064e+07 1.19475e+07 0.00316729 1.60878e+07 50.0371 0.00348224 0.995081 0 50.1456 GTEX-131XG-0526-SM-5DUWF 1 B1 2 pieces, no abnormalities 8.5 Heart Heart - Atrial Appendage 0006631 92 695 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98947 179719 0.981041 0.992431 0.853431 20178 1 76 0.00201144 124 0 5.80055e+07 0.0184136 1.10532e+06 5.84479e+07 5.52088e+06 20184 2.88545e+07 0 0.12761 0.992431 0.846971 5.80055e+07 0.00319903 1.24846e+07 1.07163e+07 1.23528e+07 144 1.23227e+07 9.96685e+06 0.00260346 1.26663e+07 50.6875 0.0189112 0.995392 0 49.7347 GTEX-131XG-0626-SM-5GCMP 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 8.7 Heart Heart - Left Ventricle 0006566 96 691 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.987351 211559 0.982404 0.991758 0.877754 20356 1 76 0.00202295 155 0 6.81905e+07 0.0172724 1.97988e+06 6.87572e+07 5.46366e+06 20361 3.38792e+07 0 0.104651 0.991758 0.870519 6.81905e+07 0.00315015 1.49395e+07 8.07001e+06 1.49466e+07 177 1.49853e+07 1.29684e+07 0.00258404 1.51747e+07 50.3141 0.0287952 0.996164 0 50.0119 GTEX-131XG-0826-SM-5LZVS 1 B1 2 pieces, nubbin of adherent fat, ~1mm, delineated 6.2 Blood Vessel Artery - Coronary 0001621 101 686 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992278 121644 0.976129 0.993326 0.832575 21786 1 76 0.00246861 129 0 5.85966e+07 0.0235942 395020 5.89903e+07 2.79826e+06 21800 2.91792e+07 0 0.143554 0.993326 0.827018 5.85966e+07 0.00319992 1.28499e+07 4.7739e+06 1.29632e+07 144 1.29227e+07 9.99368e+06 0.00283388 1.295e+07 50.0528 0.00669635 0.994374 0 50.2195 GTEX-131XG-0926-SM-5LZW5 1 B1 6 pieces, muscularis, adherent fat layer, up to ~1mm, delineated 7.6 Esophagus Esophagus - Muscularis 0004648 107 680 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.991225 173421 0.97557 0.992744 0.836792 21700 1 76 0.00232206 166 0 7.29992e+07 0.0241837 496151 7.35327e+07 3.72627e+06 21716 3.63499e+07 0 0.138777 0.992744 0.830721 7.29992e+07 0.00303474 1.59023e+07 5.99416e+06 1.61001e+07 179 1.60773e+07 1.30176e+07 0.00267786 1.60277e+07 49.9227 0.00674735 0.994263 0 50.309 GTEX-131XG-1026-SM-5GCMX 1 B1 6 pieces, squamous mucosa is ~0.5mm, ~20-25% thickness 9.6 Esophagus Esophagus - Mucosa 0006920 113 674 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984984 207788 0.975645 0.989602 0.83344 21754 1 76 0.00223363 144 0 7.01181e+07 0.0238956 338714 7.08548e+07 6.40164e+06 21771 3.48174e+07 0 0.142205 0.989602 0.824774 7.01181e+07 0.00337335 1.56778e+07 1.07483e+07 1.56899e+07 160 1.57726e+07 1.43536e+07 0.00280083 1.59064e+07 50.2112 0.00478039 0.99422 0 50.0193 GTEX-131XG-1126-SM-5DUWR 1 B1 6 pieces, all muscularis, ~2mm focus heterotopic gastric mucosa, delineated, one section 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 121 666 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989312 235660 0.97672 0.992118 0.841752 21543 1 76 0.0018439 140 0 6.18458e+07 0.0229721 583973 6.23372e+07 6.12743e+06 21555 3.07709e+07 0 0.134968 0.992118 0.835118 6.18458e+07 0.00295075 1.34501e+07 5.85344e+06 1.35109e+07 154 1.35091e+07 1.07523e+07 0.00239576 1.361e+07 50.1861 0.00936797 0.994924 0 50.1128 GTEX-131XG-1226-SM-5EGH9 1 B1 6 pieces, mucosa well preserved, up to ~1mm thick, ~40 % thickness 5.7 Stomach Stomach 0000945 126 661 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979644 156420 0.978788 0.985088 0.841845 21525 1 76 0.0022507 247 0 5.87649e+07 0.02073 399914 5.96544e+07 1.02018e+07 21539 2.91516e+07 0 0.136943 0.985088 0.829291 5.87649e+07 0.0053769 1.33395e+07 4.6105e+07 1.34337e+07 161 1.35405e+07 1.45242e+07 0.00380516 1.35478e+07 50.0134 0.00670384 0.990531 0 50.176 GTEX-131XG-1326-SM-5DUX4 1 B1 2 pieces, all cortex, minimal fat, well preserved 8.5 Adrenal Gland Adrenal Gland 0002369 129 658 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988344 258055 0.978058 0.991786 0.842165 22122 1 76 0.00184301 134 0 6.37979e+07 0.0215561 438329 6.43263e+07 6.07709e+06 22139 3.17221e+07 0 0.135893 0.991786 0.835248 6.37979e+07 0.00292711 1.41457e+07 6.28966e+06 1.41843e+07 146 1.4232e+07 1.28944e+07 0.00238318 1.43042e+07 50.1265 0.00681415 0.995227 0 50.068 GTEX-131XG-1426-SM-5GCMO 1 B1 2 pieces, well preserved; Islets well visualized, rep encircled. Trace adherent fat; good specimens 7.8 Pancreas Pancreas 0001150 130 657 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.985391 219661 0.980349 0.990376 0.859368 21080 1 76 0.00242322 105 0 8.56456e+07 0.0193023 216250 8.64778e+07 8.26038e+06 21097 4.25188e+07 0 0.120981 0.990376 0.851098 8.56456e+07 0.00357682 1.96667e+07 2.33998e+07 1.98819e+07 138 1.9935e+07 2.52641e+07 0.00299712 2.00375e+07 50.1283 0.00250064 0.995362 0 50.2721 GTEX-131XG-1526-SM-5GCNQ 1 B1 6 pieces, all muscularis, trace 'contaminant' mucosa, delineated 8.5 Colon Colon - Sigmoid 0001159 133 654 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.986561 197112 0.975718 0.990902 0.841528 21630 1 76 0.00197225 142 0 6.19312e+07 0.0239374 306821 6.24998e+07 5.26599e+06 21641 3.07605e+07 0 0.13419 0.990902 0.833872 6.19312e+07 0.00314373 1.34711e+07 5.07053e+06 1.3504e+07 144 1.35621e+07 1.22369e+07 0.00255543 1.36675e+07 50.1936 0.00490915 0.995243 0 50.0608 GTEX-131XG-1726-SM-5LZUR 2 B1 6 pieces, mucosa variably preserved, rare lymphoid aggregates, rep encircled 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 142 645 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990632 202787 0.96808 0.991995 0.780409 24973 1 76 0.0025654 207 0 8.53688e+07 0.0314914 296925 8.60578e+07 4.41216e+06 25006 4.25024e+07 0 0.187671 0.991995 0.774161 8.53688e+07 0.00327191 1.87762e+07 8.7758e+06 1.89685e+07 204 1.89722e+07 1.47434e+07 0.00291817 1.88825e+07 49.8815 0.0034503 0.993358 0 50.2547 GTEX-131XG-1826-SM-5LZV4 1 B1 6 pieces, well preserved; mucosa up to ~0.3mm, ~20% thickness 8.7 Colon Colon - Transverse 0001157 146 641 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.988943 463471 0.976542 0.99066 0.829924 25446 1 76 0.00274565 423 0 1.60022e+08 0.0223437 1.33815e+06 1.6153e+08 8.36045e+06 25487 7.96147e+07 0 0.146618 0.99066 0.822173 1.60022e+08 0.00344724 3.54503e+07 2.28222e+07 3.60548e+07 356 3.60462e+07 2.9186e+07 0.00309584 3.57161e+07 49.7701 0.0082842 0.992377 0 50.4227 GTEX-131XG-1926-SM-5LZVG 1 B1 2 pieces, ovary, post menopausal atrophy, one section with predominant vascular ovarian hilum, delineated. Switched with -2025 8.4 Ovary Ovary 0000992 152 635 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.989845 210188 0.972071 0.990999 0.78875 23033 1 76 0.002156 143 0 6.51376e+07 0.0276047 107050 6.57292e+07 2.67188e+06 23063 3.23898e+07 0 0.183321 0.990999 0.781651 6.51376e+07 0.00309128 1.42972e+07 5.15899e+06 1.43409e+07 147 1.43326e+07 1.25531e+07 0.00262309 1.43845e+07 50.0903 0.00162865 0.992152 0 50.0764 GTEX-131XG-2026-SM-5GCN5 1 B1 2 pieces, mainly myometrium, thin layer (0.5-1mm) inactive endometrial glands/stroma, delineated. Switch with -1925 8.9 Uterus Uterus 0000995 152 635 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.986597 234470 0.971887 0.990765 0.790768 23470 1 76 0.00201056 168 0 7.83452e+07 0.0277388 94167 7.90754e+07 5.95459e+06 23500 3.89181e+07 0 0.18112 0.990765 0.783465 7.83452e+07 0.00303292 1.71174e+07 6.59025e+06 1.71434e+07 179 1.72384e+07 1.48482e+07 0.00251959 1.73312e+07 50.1341 0.00119085 0.994933 0 50.0379 GTEX-131XG-2126-SM-5DUXG 1 B1 6 pieces, squamous mucosa is ~0.25mm, evidence of repithelialization 7.9 Vagina Vagina 0000996 156 631 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989748 200376 0.97574 0.9925 0.786126 22521 1 76 0.00198466 127 0 6.19085e+07 0.0240268 200428 6.23763e+07 5.89536e+06 22534 3.08081e+07 0 0.189614 0.9925 0.78023 6.19085e+07 0.00299692 1.37952e+07 7.55057e+06 1.38742e+07 138 1.39172e+07 1.15184e+07 0.00248938 1.39147e+07 49.9954 0.00321321 0.995252 0 50.1426 GTEX-131XG-2226-SM-5DUXS 0 B1 1 pieces, muscular artery as with 2225; partially occlusive atherosis, ~50% 8 Blood Vessel Artery - Tibial 0007610 256 531 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.877544 215013 0.978857 0.879668 0.864631 21431 1 76 0.00187825 168 0 7.37973e+07 0.0207348 237312 8.38922e+07 7.49012e+06 21445 3.67154e+07 0 0.114226 0.879668 0.760588 7.37973e+07 0.00265148 1.59563e+07 5.98473e+06 1.61527e+07 186 1.61654e+07 1.56908e+07 0.00226394 1.6113e+07 49.9189 0.00282877 0.881792 0 50.3058 GTEX-131XG-2326-SM-5HL8F 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8 Muscle Muscle - Skeletal 0011907 257 530 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990034 253543 0.984047 0.993407 0.880558 19294 1 76 0.00198524 205 0 7.86791e+07 0.0157247 1.1548e+06 7.92013e+07 7.96317e+06 19298 3.91398e+07 0 0.103489 0.993407 0.874752 7.86791e+07 0.00296936 1.71815e+07 9.9269e+06 1.72937e+07 224 1.73215e+07 1.63959e+07 0.00247563 1.73909e+07 50.1 0.0145806 0.996779 0 50.1627 GTEX-131XG-2526-SM-5HL7F 0 B1 3 pieces, adherent discontinous rims of fat up to ~1.3mm, delineated 6.8 Nerve Nerve - Tibial 0001323 257 530 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.98906 245634 0.971392 0.991548 0.796434 23186 1 76 0.00206227 173 0 7.40141e+07 0.0283198 203089 7.46451e+07 6.19215e+06 23215 3.68235e+07 0 0.174958 0.991548 0.789702 7.40141e+07 0.00311594 1.61864e+07 6.46997e+06 1.63947e+07 176 1.63987e+07 1.28518e+07 0.00258779 1.63544e+07 49.9324 0.00272073 0.994035 0 50.3197 GTEX-131XG-2626-SM-5KM17 0 B1 1 piece skin, as with 2625. 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 258 529 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985414 149224 0.972768 0.988064 0.797945 22343 1 76 0.00394667 142 0 6.06676e+07 0.0270467 568807 6.14005e+07 2.63385e+06 22366 3.01442e+07 0 0.174823 0.988064 0.788421 6.06676e+07 0.00540829 1.33243e+07 6.24574e+06 1.34264e+07 147 1.34237e+07 8.67757e+06 0.00467552 1.34798e+07 50.1042 0.00926388 0.990714 0 50.1907 GTEX-131XG-5016-SM-AN3XZ B1 Muscle Muscle - Skeletal 0011907 259 ChIP-Seq GTEX-131XH-0003-SM-5DU5M B1 Blood Whole Blood 0013756 996 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131XH-0003-SM-7DRPA B1 Blood Whole Blood 0013756 996 BP-42742 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131XH-0006-SM-5O98V B1 7.6 Blood Whole Blood 0013756 996 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.934347 324252 0.982512 0.937582 0.79426 16388 1 76 0.00241685 81 0 7.89343e+07 0.0148803 108061 8.41892e+07 1.08235e+07 16392 3.91647e+07 0 0.188252 0.937582 0.744684 7.89343e+07 0.00471764 1.90039e+07 1.76432e+08 1.86797e+07 114 1.86817e+07 2.26453e+07 0.00356328 1.92892e+07 50.8 0.00128355 0.940817 0 49.5698 GTEX-131XH-0008-SM-5YYAC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1218 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.99268 440491 0.976358 0.994069 0.852355 21279 1 76 0.00247898 227 0 1.02587e+08 0.0233151 347229 1.03199e+08 4.55836e+06 21297 5.10998e+07 0 0.124003 0.994069 0.8473 1.02587e+08 0.00314253 2.29743e+07 1.55768e+07 2.30969e+07 251 2.31216e+07 2.68164e+07 0.00281029 2.30961e+07 49.9724 0.00336467 0.995458 0 50.1331 GTEX-131XH-0011-R10a-SM-5EGLJ B1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 948 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.98757 730580 0.948626 0.991486 0.818466 24079 1 76 0.00234655 269 0 8.42196e+07 0.0507185 2.10228e+06 8.49427e+07 7.92656e+06 24099 4.18289e+07 0 0.130159 0.991486 0.811498 8.42196e+07 0.00339287 1.7967e+07 2.42228e+07 1.81438e+07 256 1.82293e+07 1.19698e+07 0.00286764 1.81846e+07 49.9386 0.0247493 0.995403 0 50.2449 GTEX-131XH-0011-R11a-SM-5EGLN B1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 948 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990254 621557 0.94562 0.992359 0.745143 23758 1 76 0.00231088 203 0 8.73076e+07 0.0537379 1.00085e+06 8.79798e+07 7.31552e+06 23784 4.34234e+07 0 0.200477 0.992359 0.73945 8.73076e+07 0.00318118 1.87668e+07 1.97866e+07 1.89126e+07 237 1.89699e+07 1.27034e+07 0.00274511 1.88818e+07 49.8835 0.0113759 0.994465 0 50.1935 GTEX-131XH-0011-R1a-SM-5DUWA B1, A1 9.2 Brain Brain - Hippocampus 0001954 948 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986681 827710 0.949001 0.990777 0.815388 23753 1 76 0.00244787 155 0 7.27075e+07 0.0504909 2.57388e+06 7.33844e+07 6.61912e+06 23777 3.61017e+07 0 0.133613 0.990777 0.807867 7.27075e+07 0.0037821 1.56294e+07 1.88767e+07 1.56624e+07 194 1.5715e+07 9.34864e+06 0.00311223 1.5868e+07 50.2423 0.0350739 0.994872 0 50.0526 GTEX-131XH-0011-R2b-SM-5DUVY B1, A1 7.1 Brain Brain - Substantia nigra 0002038 948 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989693 463594 0.959132 0.992584 0.811563 22984 1 76 0.00290175 172 0 6.64144e+07 0.0405798 5.09441e+06 6.69106e+07 6.477e+06 23013 3.30344e+07 0 0.14757 0.992584 0.805544 6.64144e+07 0.00403036 1.44563e+07 1.3921e+07 1.45606e+07 174 1.44949e+07 8.00324e+06 0.00346441 1.46973e+07 50.3467 0.0761375 0.995475 0 50.1797 GTEX-131XH-0011-R3b-SM-5DUWM B1, A1 8.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 948 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990105 640750 0.954829 0.993077 0.824666 22579 1 76 0.00255462 126 0 5.87626e+07 0.0445891 2.06464e+06 5.91723e+07 5.41137e+06 22594 2.92188e+07 0 0.130163 0.993077 0.818957 5.87626e+07 0.00371474 1.26381e+07 1.52785e+07 1.26368e+07 146 1.26614e+07 7.99825e+06 0.00313294 1.27727e+07 50.2187 0.0348919 0.99605 0 49.9974 GTEX-131XH-0011-R4b-SM-5DUWB B1, A1 7.7 Brain Brain - Amygdala 0001876 948 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986207 563843 0.955367 0.99045 0.827163 22868 1 76 0.00276239 156 0 6.43295e+07 0.044274 3.9756e+06 6.49498e+07 6.60108e+06 22884 3.19482e+07 0 0.128204 0.99045 0.819263 6.43295e+07 0.00408355 1.38426e+07 1.57346e+07 1.40378e+07 170 1.40311e+07 7.70344e+06 0.00342014 1.41004e+07 50.1231 0.0612105 0.994692 0 50.35 GTEX-131XH-0011-R6a-SM-5KM2G B1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 948 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987594 605265 0.954539 0.99017 0.813142 24370 1 76 0.00442927 200 0 8.42891e+07 0.0449655 3.22545e+06 8.5126e+07 3.91368e+06 24391 4.18821e+07 0 0.141398 0.99017 0.805148 8.42891e+07 0.00558557 1.81326e+07 1.59573e+07 1.82789e+07 224 1.82969e+07 1.07687e+07 0.00500592 1.83215e+07 50.0336 0.0378903 0.992745 0 50.2008 GTEX-131XH-0011-R8a-SM-5EGLL B1, A1 6.9 Brain Brain - Hypothalamus 0001898 948 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.990154 746827 0.955566 0.992973 0.847572 23560 1 76 0.00249071 204 0 7.8043e+07 0.0439728 3.15048e+06 7.85953e+07 6.97817e+06 23573 3.88096e+07 0 0.107994 0.992973 0.841617 7.8043e+07 0.0036206 1.68582e+07 2.08733e+07 1.70003e+07 241 1.69717e+07 1.05914e+07 0.00305405 1.70954e+07 50.1815 0.0400848 0.995793 0 50.2099 GTEX-131XH-0126-SM-5LZUY 0 B1 6 pieces, no dermal fat; squamous epithelium is ~60-70 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1042 735 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990551 226123 0.973984 0.991821 0.832223 22728 1 76 0.00292305 159 0 7.02793e+07 0.0258005 550120 7.08589e+07 3.42094e+06 22747 3.49656e+07 0 0.141761 0.991821 0.825417 7.02793e+07 0.00372398 1.54133e+07 9.82094e+06 1.5493e+07 169 1.54725e+07 1.19775e+07 0.003323 1.55233e+07 50.082 0.0077636 0.993091 0 50.1289 GTEX-131XH-0226-SM-5LZVB 1 B1 2 pieces, mild ischemic changes 6.3 Heart Heart - Left Ventricle 0006566 1088 689 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992397 132255 0.985886 0.993781 0.851327 18519 1 76 0.00415598 138 0 6.27365e+07 0.0138997 3.84817e+06 6.31292e+07 3.02786e+06 18524 3.12449e+07 0 0.134558 0.993781 0.846033 6.27365e+07 0.00495887 1.33643e+07 1.68185e+07 1.36288e+07 172 1.3503e+07 4.72436e+06 0.00455686 1.35459e+07 50.0793 0.0609571 0.995165 0 50.4899 GTEX-131XH-0426-SM-5DUWU 1 B1 2 pieces, mild congestion. Brochial hyaline cartilage present ,rep delineated 7.5 Lung Lung 0008952 1095 682 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988812 216050 0.974966 0.991518 0.767163 22859 1 76 0.0026133 122 0 5.94964e+07 0.0243168 258720 6.00054e+07 5.12264e+06 22891 2.95753e+07 0 0.207802 0.991518 0.760656 5.94964e+07 0.00373235 1.30423e+07 5.66226e+06 1.31848e+07 132 1.32092e+07 9.69351e+06 0.0031713 1.31686e+07 49.9231 0.00431161 0.994224 0 50.2717 GTEX-131XH-0526-SM-5DUX7 1 B1 2 pieces, no significant histopathologic changes 8 Thyroid Thyroid 0002046 1097 680 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987378 243064 0.970255 0.99103 0.81073 23141 1 76 0.00210064 124 0 6.1591e+07 0.029333 122228 6.21484e+07 5.67335e+06 23165 3.06053e+07 0 0.159525 0.99103 0.803458 6.1591e+07 0.00328048 1.33914e+07 6.48846e+06 1.35123e+07 135 1.35864e+07 1.22724e+07 0.00268839 1.35303e+07 49.8965 0.00196671 0.994683 0 50.2246 GTEX-131XH-0626-SM-5LZWH 1 B1 2 pieces, mild macro and microvesicular steatosis 6.5 Liver Liver 0001114 1109 668 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992736 158681 0.974803 0.993984 0.844273 20076 1 76 0.00365314 154 0 6.81675e+07 0.0250056 2.05889e+06 6.85801e+07 3.343e+06 20088 3.39512e+07 0 0.130531 0.993984 0.839193 6.81675e+07 0.00441674 1.44606e+07 1.39023e+07 1.4805e+07 184 1.46538e+07 7.38462e+06 0.00403446 1.46982e+07 50.0756 0.0300216 0.995232 0 50.5883 GTEX-131XH-0826-SM-5GCN8 1 B1 2 pieces, no signficant fibrovascular component 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1116 661 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983904 225459 0.97656 0.989307 0.806202 23362 1 76 0.00260106 165 0 7.82375e+07 0.0231412 741850 7.90831e+07 7.12223e+06 23388 3.8804e+07 0 0.170359 0.989307 0.797581 7.82375e+07 0.00393174 1.7116e+07 9.20534e+06 1.71878e+07 192 1.73116e+07 1.23709e+07 0.00326277 1.7389e+07 50.1116 0.00938064 0.99471 0 50.1047 GTEX-131XH-2226-SM-5DUXJ 0 B1 2 pieces, minimal dermal fat; squamous epithelium is ~40-50 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1217 560 BP-44437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/08/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987178 250702 0.973669 0.9909 0.821153 22814 1 76 0.00226015 183 0 6.61857e+07 0.0259591 254575 6.67935e+07 6.70928e+06 22839 3.289e+07 0 0.152516 0.9909 0.813681 6.61857e+07 0.0035555 1.41841e+07 9.17192e+06 1.43025e+07 152 1.43728e+07 1.26983e+07 0.00290539 1.43436e+07 49.9492 0.00381137 0.994623 0 50.2078 GTEX-131XH-2426-SM-5PNZ6 0 B1 4 pieces, clean specimens; no adherent fat 6.9 Blood Vessel Artery - Tibial 0007610 1229 548 BP-45139 RNA Extraction from Paxgene-derived Lysate Plate Based 10/28/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992187 332957 0.979095 0.992816 0.8756 20482 1 76 0.00318086 210 0 9.59634e+07 0.0204889 300038 9.66577e+07 2.84521e+06 20491 4.77616e+07 0 0.103495 0.992816 0.86931 9.59634e+07 0.00385441 2.03419e+07 7.86938e+06 2.05105e+07 220 2.03364e+07 2.16019e+07 0.00351742 2.0577e+07 50.294 0.00310413 0.993446 0 50.2063 GTEX-131XH-2526-SM-5GCND 0 B1 2 pieces, partial rim of adherent fat, ~.3mm, generally clean specimens 6 Nerve Nerve - Tibial 0001323 1231 546 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.984513 164439 0.966726 0.9894 0.777609 23117 1 76 0.00245682 133 0 5.7554e+07 0.0330096 318493 5.81706e+07 5.20123e+06 23142 2.85512e+07 0 0.189117 0.9894 0.769366 5.7554e+07 0.00383604 1.25275e+07 6.07446e+06 1.25949e+07 138 1.26226e+07 8.60991e+06 0.00314302 1.27671e+07 50.2845 0.00547515 0.994286 0 50.1342 GTEX-131XH-2626-SM-5GCNP 1 B1 2 pieces, ~20% adherent connective tissue (delineated) rest is glandular parenchyma; good specimens 7.8 Salivary Gland Minor Salivary Gland 0006330 1256 521 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.983426 174772 0.979087 0.988785 0.825188 21917 1 76 0.00259243 121 0 6.02435e+07 0.0205778 234744 6.09268e+07 5.78776e+06 21930 2.98911e+07 0 0.153899 0.988785 0.815934 6.02435e+07 0.00382731 1.35207e+07 8.82848e+06 1.3544e+07 131 1.36451e+07 1.18428e+07 0.00320653 1.37299e+07 50.1549 0.00385289 0.994143 0 50.0431 GTEX-131XH-2726-SM-5GCO2 0 B1 2 pieces, ~5% interstital fat, delineated; 2-3mm nubbin of tendon, delineated 7.9 Muscle Muscle - Skeletal 0011907 1262 515 BP-44172 RNA Extraction from Paxgene-derived Lysate Plate Based 10/01/2013 LCSET-4795 02/23/2014 TruSeq.v1 RNASEQ 0.986995 202121 0.983969 0.991435 0.870088 19699 1 76 0.00245372 111 0 6.46215e+07 0.015802 641562 6.51797e+07 5.69619e+06 19709 3.21028e+07 0 0.113881 0.991435 0.862635 6.46215e+07 0.00355087 1.38788e+07 6.55133e+06 1.39471e+07 138 1.39993e+07 1.38879e+07 0.00299984 1.40833e+07 50.1496 0.00984297 0.995876 0 50.1228 GTEX-131XH-2926-SM-5LZU4 1 B1 2 pieces, no abnnormalities; incidental dura/vessels, delineated, in one section 7.6 Brain Brain - Cerebellum 0002037 1325 452 BP-43956 RNA Extraction from Paxgene-derived Lysate Plate Based 09/25/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.985344 254925 0.951284 0.986511 0.718046 23512 1 76 0.0031137 159 0 8.21607e+07 0.0482377 824895 8.32841e+07 4.05912e+06 23544 4.08656e+07 0 0.233239 0.986511 0.70836 8.21607e+07 0.00375231 1.77795e+07 1.02279e+07 1.78834e+07 183 1.79162e+07 1.06936e+07 0.00343263 1.78341e+07 49.8852 0.0099046 0.987678 0 50.1457 GTEX-131XW-0002-SM-5GYA5 C1 Blood Whole Blood 0013756 519 BP-42827,BP-42831 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/28/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131XW-0002-SM-7DROR C1 Blood Whole Blood 0013756 519 BP-42827,BP-42831 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/28/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131XW-0006-SM-5O9AO C1 7.4 Blood Whole Blood 0013756 519 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.961637 297779 0.981169 0.964476 0.79405 18232 1 76 0.00245121 97 0 7.25696e+07 0.0178796 238780 7.52425e+07 8.93591e+06 18237 3.60741e+07 0 0.187119 0.964476 0.765842 7.25696e+07 0.00428402 1.70881e+07 1.08038e+08 1.70377e+07 116 1.70645e+07 1.86197e+07 0.00336492 1.72892e+07 50.327 0.00317347 0.967315 0 49.9261 GTEX-131XW-0008-SM-664MJ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 657 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993341 443488 0.974511 0.994134 0.856573 21493 1 76 0.0020279 289 0 9.88466e+07 0.0251482 451984 9.94298e+07 6.2896e+06 21519 4.9248e+07 0 0.117938 0.994134 0.851549 9.88466e+07 0.00282929 2.20471e+07 1.54925e+07 2.21478e+07 267 2.21143e+07 2.44238e+07 0.00242827 2.21684e+07 50.061 0.00454576 0.994927 0 50.1139 GTEX-131XW-0011-R10a-SM-5DUVA C1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 530 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.984312 451803 0.966121 0.988267 0.840719 21033 1 76 0.00228718 264 0 7.00109e+07 0.0337531 7.31697e+06 7.08421e+07 6.86917e+06 21041 3.47942e+07 0 0.125402 0.988267 0.830855 7.00109e+07 0.00354648 1.52892e+07 2.79825e+07 1.52808e+07 294 1.49559e+07 3.82664e+06 0.00291431 1.58578e+07 51.4634 0.103286 0.992221 0 49.9862 GTEX-131XW-0011-R11a-SM-5DUV9 C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 530 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.967592 384581 0.95564 0.970926 0.802584 21043 1 76 0.00240292 194 0 6.35791e+07 0.0442122 4.45737e+06 6.54829e+07 5.83811e+06 21052 3.15967e+07 0 0.153056 0.970926 0.77925 6.35791e+07 0.00369562 1.38905e+07 2.26220e+07 1.36942e+07 218 1.35505e+07 3.17516e+06 0.00304705 1.4215e+07 51.1966 0.0680691 0.97426 0 49.6442 GTEX-131XW-0011-R6b-SM-5K7XY C1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 530 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991979 255177 0.970962 0.994313 0.851876 19476 1 76 0.00293407 147 0 5.8055e+07 0.0289298 5.76959e+06 5.8387e+07 1.07078e+07 19483 2.89168e+07 0 0.119086 0.994313 0.847031 5.8055e+07 0.00420612 1.27688e+07 2.44124e+07 1.26758e+07 191 1.24311e+07 3.06777e+06 0.0035686 1.3138e+07 51.3824 0.0988163 0.996648 0 49.8172 GTEX-131XW-0011-R8a-SM-5DUWY C1, A1 7.1 Brain Brain - Hypothalamus 0001898 530 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.986273 445329 0.962942 0.988973 0.834254 21194 1 76 0.0023313 265 0 6.75206e+07 0.0369524 6.72091e+06 6.82734e+07 5.85954e+06 21203 3.3597e+07 0 0.128688 0.988973 0.825055 6.75206e+07 0.00364941 1.47476e+07 3.04581e+07 1.46468e+07 262 1.43723e+07 3.21045e+06 0.00298856 1.51647e+07 51.3414 0.0984411 0.991673 0 49.8285 GTEX-131XW-0011-R9a-SM-5N9EO C1, A1 6.7 Brain Brain - Spinal cord (cervical c-1) 0006469 530 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988062 998511 0.950942 0.989799 0.814192 24118 1 76 0.00409701 390 0 1.05301e+08 0.0487194 3.3749e+06 1.06387e+08 5.55848e+06 24141 5.23118e+07 0 0.13675 0.989799 0.805887 1.05301e+08 0.0043421 2.30688e+07 2.26721e+07 2.34784e+07 345 2.31973e+07 1.40059e+07 0.00421934 2.35423e+07 50.369 0.031723 0.991536 0 50.44 GTEX-131XW-0126-SM-5LZWD 0 C1 2 pieces, well trimmed 6.6 Nerve Nerve - Tibial 0001323 640 961 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900,LCSET-5336 04/10/2014 TruSeq.v1 RNASEQ 0.994461 440150 0.969789 0.995016 0.783671 25826 1 76 0.00187105 388 0 1.37459e+08 0.0298977 489089 1.38147e+08 5.6938e+06 25882 6.85159e+07 0 0.186118 0.995016 0.779766 1.37459e+08 0.00246852 3.02102e+07 1.47579e+07 3.03765e+07 379 3.02885e+07 2.28773e+07 0.00216962 3.03824e+07 50.0774 0.00354035 0.995571 0 50.1373 GTEX-131XW-0226-SM-5IJCA 1 C1 2 pieces, atherosclerosis and medial calcific sclerosis 7.6 Blood Vessel Artery - Tibial 0007610 645 957 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988391 274735 0.976279 0.992013 0.828475 22690 1 76 0.00222528 200 0 8.59862e+07 0.0233059 221671 8.66785e+07 1.20398e+07 22715 4.27154e+07 0 0.147804 0.992013 0.821858 8.59862e+07 0.00397754 1.85658e+07 8.72408e+06 1.86597e+07 207 1.87051e+07 1.6411e+07 0.00309821 1.88254e+07 50.1603 0.00255739 0.995634 0 50.126 GTEX-131XW-0326-SM-5KM1J 0 C1 2 pieces, minimal internal fat 8.6 Muscle Muscle - Skeletal 0011907 650 952 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.989341 122753 0.982901 0.991438 0.862815 20105 1 76 0.00361126 156 0 7.76312e+07 0.0168326 753144 7.83016e+07 3.40528e+06 20117 3.86468e+07 0 0.120086 0.991438 0.855428 7.76312e+07 0.00456547 1.67059e+07 9.75372e+06 1.68064e+07 170 1.67892e+07 1.59877e+07 0.00408735 1.68728e+07 50.1242 0.0096185 0.993536 0 50.1499 GTEX-131XW-0426-SM-5LZWP 1 C1 6 pieces, well trimmed, squamous epithelium measures up to 83 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 655 948 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.99095 240776 0.97566 0.992211 0.79637 22962 1 76 0.0025368 159 0 6.68507e+07 0.0240689 375083 6.73755e+07 3.2388e+06 22985 3.3268e+07 0 0.17929 0.992211 0.790167 6.68507e+07 0.00330978 1.46383e+07 7.45488e+06 1.47281e+07 157 1.47327e+07 1.10707e+07 0.0029228 1.47169e+07 49.9732 0.00556705 0.993472 0 50.153 GTEX-131XW-0526-SM-5PNXZ 1 C1 2 pieces, 20-30% fibrous 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 659 945 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989813 214048 0.977648 0.990758 0.792281 24319 1 76 0.00330818 279 0 1.07963e+08 0.0219655 376820 1.0897e+08 3.29094e+06 24360 5.37498e+07 0 0.185367 0.990758 0.784958 1.07963e+08 0.00382634 2.36814e+07 9.76647e+06 2.39487e+07 311 2.38627e+07 1.8928e+07 0.00356702 2.3871e+07 50.0088 0.00345801 0.991702 0 50.2806 GTEX-131XW-0626-SM-5PNVD 1 C1 6 pieces, substantial attached adipose tissue from 10-40% 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 676 928 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991692 148623 0.973351 0.993425 0.782284 22607 1 76 0.00206987 136 0 5.75152e+07 0.026443 277986 5.78959e+07 5.32394e+06 22627 2.86369e+07 0 0.191067 0.993425 0.77714 5.75152e+07 0.00325269 1.2625e+07 5.89232e+06 1.27066e+07 140 1.26714e+07 9.0279e+06 0.00266025 1.27572e+07 50.1687 0.00480148 0.995157 0 50.1611 GTEX-131XW-0726-SM-5EGK3 0 C1 2 pieces, non-neoplastic breast tissue with no greater than 20% fat 7 Breast Breast - Mammary Tissue 0008367 686 919 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.985774 365315 0.971394 0.989962 0.737617 26216 1 76 0.00220514 283 0 1.13985e+08 0.0280127 494390 1.15141e+08 1.10795e+07 26275 5.65838e+07 0 0.233777 0.989962 0.730213 1.13985e+08 0.00327449 2.5108e+07 1.43964e+07 2.53927e+07 314 2.55097e+07 1.84563e+07 0.00273756 2.54429e+07 49.9344 0.00429377 0.994149 0 50.2819 GTEX-131XW-1126-SM-5EGK4 1 C1 2 pieces, some emphysematous change and fibrosis, bronchus and adjacent cartilage 6 Lung Lung 0008952 707 901 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.986658 282535 0.968972 0.990718 0.743361 23840 1 76 0.00217394 161 0 7.83028e+07 0.0306816 367050 7.90364e+07 6.98831e+06 23878 3.88689e+07 0 0.225611 0.990718 0.736461 7.83028e+07 0.00339178 1.70995e+07 7.6027e+06 1.72808e+07 181 1.73446e+07 1.12129e+07 0.00278036 1.73348e+07 49.9858 0.00464406 0.994779 0 50.2637 GTEX-131XW-2226-SM-5PNY1 1 C1 6 pieces, atherosclerosis 6.4 Blood Vessel Artery - Aorta 0001496 743 871 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.985968 223285 0.973526 0.986502 0.794773 22983 1 76 0.0032881 211 0 9.13603e+07 0.0261295 257685 9.26104e+07 2.964e+06 23004 4.54368e+07 0 0.178753 0.986502 0.784046 9.13603e+07 0.00386057 1.96091e+07 1.05489e+07 1.97975e+07 223 1.96347e+07 1.50504e+07 0.00357418 1.98279e+07 50.2448 0.00278246 0.987036 0 50.2391 GTEX-131XW-3126-SM-5LZUC 1 C1 4 pieces 6.2 Brain Brain - Cortex 0001870 775 844 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.992256 396757 0.964826 0.993609 0.836859 22926 1 76 0.00262264 267 0 8.27873e+07 0.0348747 4.68213e+06 8.33198e+07 3.99994e+06 22939 4.12304e+07 0 0.127967 0.993609 0.83151 8.27873e+07 0.00329685 1.7959e+07 2.56348e+07 1.83116e+07 297 1.81451e+07 8.23373e+06 0.00295929 1.82146e+07 50.0956 0.0561947 0.994962 0 50.4861 GTEX-131XW-3226-SM-5LZUO 1 C1 1 piece, adenohypophysis and neurohypophysis 6.4 Pituitary Pituitary 0000007 775 845 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990035 417953 0.951622 0.991569 0.777007 23892 1 76 0.00263782 200 0 7.91136e+07 0.0481817 1.1306e+06 7.97863e+07 4.09901e+06 23924 3.93661e+07 0 0.174615 0.991569 0.770456 7.91136e+07 0.00347984 1.67951e+07 1.69513e+07 1.7013e+07 222 1.69967e+07 8.57461e+06 0.00305818 1.69352e+07 49.9094 0.0141703 0.993103 0 50.3222 GTEX-131YS-0003-SM-5DU4F C1 Blood Whole Blood 0013756 885 BP-42867 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/29/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-131YS-0003-SM-7DRPE C1 Blood Whole Blood 0013756 885 BP-42867 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/29/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-131YS-0005-SM-5NQAS C1 8.3 Blood Whole Blood 0013756 885 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.966354 365040 0.975198 0.969063 0.790805 19960 1 76 0.002675 118 0 8.4118e+07 0.0233007 196917 8.68034e+07 1.14623e+07 19968 4.17961e+07 0 0.184394 0.969063 0.76634 8.4118e+07 0.00596568 1.92339e+07 1.034e+08 1.95532e+07 141 1.95406e+07 2.02782e+07 0.00431574 1.948e+07 49.9223 0.00226854 0.971772 0 50.4116 GTEX-131YS-0008-SM-5YY9Z C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 943 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993871 362030 0.978182 0.99479 0.856004 20797 1 76 0.00224269 291 0 1.01124e+08 0.0215063 343791 1.01653e+08 4.55661e+06 20818 5.04063e+07 0 0.122178 0.99479 0.851544 1.01124e+08 0.00275207 2.2734e+07 1.41012e+07 2.27721e+07 269 2.27633e+07 2.60733e+07 0.00249714 2.28431e+07 50.0875 0.003382 0.99571 0 50.0419 GTEX-131YS-0011-R10b-SM-5EQ5N C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 890 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991615 702607 0.956953 0.99413 0.843151 23231 1 76 0.00199129 199 0 7.37838e+07 0.0424583 2.37254e+06 7.42195e+07 8.46796e+06 23247 3.67103e+07 0 0.113802 0.99413 0.838202 7.37838e+07 0.00298937 1.6072e+07 2.01798e+07 1.60761e+07 247 1.61039e+07 1.01567e+07 0.00248907 1.62223e+07 50.1832 0.0319666 0.996646 0 50.0063 GTEX-131YS-0011-R11b-SM-5EGLM C1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 890 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988048 582113 0.943707 0.990893 0.717383 23750 1 76 0.00219688 155 0 7.80518e+07 0.0557149 754068 7.87692e+07 7.35659e+06 23783 3.87885e+07 0 0.226324 0.990893 0.71085 7.80518e+07 0.00313159 1.67788e+07 1.40595e+07 1.68693e+07 180 1.69483e+07 1.08873e+07 0.00266289 1.69078e+07 49.9402 0.00957314 0.993739 0 50.1343 GTEX-131YS-0011-R1a-SM-5DUXC C1, A1 6.3 Brain Brain - Hippocampus 0001954 890 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98651 634017 0.957419 0.990229 0.8357 22710 1 76 0.00221767 198 0 7.11201e+07 0.0422944 7.47754e+06 7.18219e+07 7.03332e+06 22720 3.53473e+07 0 0.121719 0.990229 0.827534 7.11201e+07 0.00355208 1.55479e+07 2.89218e+07 1.55896e+07 250 1.55224e+07 6.93591e+06 0.00288237 1.58677e+07 50.5499 0.104112 0.993947 0 50.0671 GTEX-131YS-0011-R3b-SM-5DUXB C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 890 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988404 674793 0.952504 0.99113 0.843931 22830 1 76 0.00198241 156 0 6.29219e+07 0.0471413 2.81449e+06 6.3485e+07 5.02101e+06 22840 3.12994e+07 0 0.108573 0.99113 0.836445 6.29219e+07 0.00312076 1.36828e+07 1.7066e+07 1.3737e+07 184 1.37029e+07 7.74919e+06 0.00255002 1.38886e+07 50.3364 0.0443332 0.993856 0 50.0988 GTEX-131YS-0011-R4a-SM-5DUVL C1, A1 7.1 Brain Brain - Amygdala 0001876 890 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.989095 548320 0.956209 0.992336 0.838797 22904 1 76 0.00204334 154 0 6.06134e+07 0.0435001 4.08185e+06 6.10815e+07 5.40694e+06 22915 3.01278e+07 0 0.117412 0.992336 0.832368 6.06134e+07 0.003502 1.33062e+07 1.49720e+07 1.3238e+07 182 1.32086e+07 6.66693e+06 0.00277029 1.35325e+07 50.6056 0.0668262 0.995577 0 49.8717 GTEX-131YS-0011-R5b-SM-5K7YB C1, A1 8.8 Brain Brain - Caudate (basal ganglia) 0001873 890 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990655 396771 0.955982 0.992989 0.828303 22684 1 76 0.0027382 127 0 5.68957e+07 0.0435063 1.87809e+06 5.72974e+07 1.01849e+07 22697 2.83178e+07 0 0.127679 0.992989 0.822496 5.68957e+07 0.00380066 1.2487e+07 1.31438e+07 1.23284e+07 145 1.23799e+07 7.77474e+06 0.00326819 1.25621e+07 50.3652 0.0327779 0.995323 0 49.6803 GTEX-131YS-0011-R7a-SM-5IJDA C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 890 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990716 545705 0.957926 0.993324 0.840941 23593 1 76 0.00226727 204 0 7.27137e+07 0.0416755 2.44053e+06 7.32024e+07 9.26759e+06 23606 3.6165e+07 0 0.116985 0.993324 0.835327 7.27137e+07 0.00386164 1.58995e+07 1.42936e+07 1.5922e+07 214 1.5864e+07 1.01813e+07 0.00306236 1.61478e+07 50.4433 0.0333394 0.995932 0 50.0354 GTEX-131YS-0011-R9b-SM-5EQLY C1, A1 7.8 Brain Brain - Spinal cord (cervical c-1) 0006469 890 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990603 703455 0.957552 0.992991 0.850825 23251 1 76 0.00203014 226 0 7.74941e+07 0.0420105 2.31992e+06 7.80411e+07 8.98978e+06 23267 3.8533e+07 0 0.106727 0.992991 0.844862 7.74941e+07 0.00332626 1.70999e+07 1.64771e+07 1.72711e+07 222 1.71021e+07 1.25652e+07 0.00267664 1.74835e+07 50.5514 0.0297269 0.995379 0 50.249 GTEX-131YS-0126-SM-5KM1M 1 C1 6 pieces; ~10% external/internal fat; epidermis measures up to 40um 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 942 1013 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986072 176817 0.974505 0.988922 0.817202 23286 1 76 0.00401749 196 0 7.92803e+07 0.0252428 338501 8.01684e+07 3.92352e+06 23308 3.94062e+07 0 0.157303 0.988922 0.808149 7.92803e+07 0.00524415 1.71964e+07 8.19255e+06 1.73435e+07 179 1.73805e+07 1.38526e+07 0.00462905 1.73688e+07 49.9831 0.00422238 0.991772 0 50.2129 GTEX-131YS-0226-SM-5IJEH 1 C1 2 pieces; one contains 50% fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 945 1011 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.983541 273647 0.974406 0.985598 0.788795 24696 1 76 0.00470203 218 0 9.99846e+07 0.0253081 515118 1.01446e+08 6.4599e+06 24737 4.96326e+07 0 0.185611 0.985598 0.777435 9.99846e+07 0.00527962 2.19701e+07 9.31572e+06 2.21283e+07 226 2.21437e+07 1.61762e+07 0.00499022 2.21586e+07 50.0168 0.00507777 0.987656 0 50.1793 GTEX-131YS-0326-SM-5PNYW 1 C1 2 pieces; one with ~10% external fat, other with up to 10% internal/external fat 7.4 Nerve Nerve - Tibial 0001323 948 1008 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991495 170830 0.965473 0.992092 0.750626 24871 1 76 0.00318431 218 0 9.08906e+07 0.0342308 321159 9.16151e+07 2.58637e+06 24919 4.52562e+07 0 0.214847 0.992092 0.74469 9.08906e+07 0.0034573 2.00066e+07 7.70266e+06 2.00027e+07 226 1.99221e+07 1.41204e+07 0.00332072 2.01392e+07 50.2709 0.00350553 0.992688 0 49.9951 GTEX-131YS-0426-SM-5EQ4J 1 C1 2 pieces; some intimal thickening 7.1 Blood Vessel Artery - Tibial 0007610 951 1006 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991149 267485 0.971994 0.99333 0.804746 22243 1 76 0.00204851 158 0 7.1603e+07 0.0276332 476620 7.20838e+07 7.82151e+06 22270 3.56196e+07 0 0.167249 0.99333 0.799378 7.1603e+07 0.00310043 1.5422e+07 6.34688e+06 1.55904e+07 166 1.55694e+07 1.25829e+07 0.00257332 1.55908e+07 50.0344 0.00661203 0.995511 0 50.2715 GTEX-131YS-0526-SM-5EGKJ 1 C1 2 pieces; 10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 953 1004 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.992097 324855 0.982996 0.994292 0.871947 20022 1 76 0.00167182 200 0 8.15584e+07 0.0167688 879724 8.20266e+07 6.8747e+06 20034 4.06077e+07 0 0.111049 0.994292 0.866969 8.15584e+07 0.00260024 1.76807e+07 8.62274e+06 1.76238e+07 204 1.76943e+07 1.83368e+07 0.00213501 1.77712e+07 50.1084 0.0107249 0.996487 0 49.9193 GTEX-131YS-0626-SM-5EGKL 1 C1 2 pieces; fibroadipose tissue, small lobules and ducts embedded in fibrotic stroma 7.4 Breast Breast - Mammary Tissue 0008367 979 978 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988286 280244 0.96878 0.991202 0.749757 24912 1 76 0.00214537 147 0 7.02335e+07 0.0306354 226522 7.08569e+07 6.68185e+06 24951 3.49026e+07 0 0.219024 0.991202 0.743161 7.02335e+07 0.00318625 1.53811e+07 7.93831e+06 1.55181e+07 151 1.55516e+07 1.19559e+07 0.00266428 1.55429e+07 49.986 0.00319689 0.994119 0 50.2218 GTEX-131YS-0726-SM-5P9G9 1 C1 2 pieces; fibrosis with nodularity, thyroid follicles and scattered aggregates of lymphocytes (likely Hashimoto's thyroiditis); one piece includes ~30% of fibrous tissue and large vessels 7.3 Thyroid Thyroid 0002046 981 977 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.988829 338079 0.962167 0.989435 0.736111 26004 1 76 0.0032956 201 0 9.78158e+07 0.0373037 301537 9.88603e+07 3.26409e+06 26050 4.86301e+07 0 0.226056 0.989435 0.728334 9.78158e+07 0.00408864 2.12843e+07 1.13227e+07 2.14326e+07 206 2.1411e+07 1.55996e+07 0.00369188 2.13671e+07 49.9487 0.00305013 0.99004 0 50.1736 GTEX-131YS-0826-SM-5PNYV 1 C1 2 pieces; one with 20% internal fat and fibrous tissue 8 Heart Heart - Atrial Appendage 0006631 982 976 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992316 254696 0.979372 0.993216 0.831583 22509 1 76 0.00304218 270 0 1.16039e+08 0.0202983 2.63659e+06 1.16831e+08 3.26197e+06 22533 5.78096e+07 0 0.147788 0.993216 0.825942 1.16039e+08 0.00341601 2.46979e+07 1.39361e+07 2.49224e+07 328 2.48105e+07 1.93537e+07 0.00322893 2.4899e+07 50.0889 0.0225675 0.994117 0 50.2262 GTEX-131YS-0926-SM-5IJB9 1 C1 2 pieces; congestion and emphysematous changes 7.3 Lung Lung 0008952 990 969 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989024 287746 0.968762 0.991967 0.745183 24690 1 76 0.00244351 149 0 6.97686e+07 0.0308337 174580 7.03336e+07 8.93033e+06 24730 3.46524e+07 0 0.223579 0.991967 0.739197 6.97686e+07 0.00429735 1.52863e+07 7.45071e+06 1.53998e+07 155 1.54061e+07 1.09355e+07 0.00336768 1.54787e+07 50.1175 0.00248217 0.994909 0 50.1849 GTEX-131YS-1126-SM-5N9FQ 1 C1 6 pieces; well trimmed; early atherosclerotic changes 5.7 Blood Vessel Artery - Aorta 0001496 991 969 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.985973 375584 0.970431 0.987505 0.776225 23852 1 76 0.00416984 277 0 1.03132e+08 0.0292095 418603 1.04437e+08 5.21609e+06 23887 5.11785e+07 0 0.194206 0.987505 0.766526 1.03132e+08 0.0043114 2.22734e+07 9.17148e+06 2.23382e+07 271 2.23058e+07 1.63313e+07 0.00424051 2.24637e+07 50.1764 0.00400819 0.989038 0 50.0727 GTEX-131YS-1226-SM-5K7VE 1 C1 2 pieces; atherosclerosis with up to 25% luminal narrowing in one piece; external fat up to 683 um 5.8 Blood Vessel Artery - Coronary 0001621 987 973 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985374 183603 0.975887 0.987957 0.809057 22986 1 76 0.00459897 155 0 8.07706e+07 0.0237144 317543 8.17552e+07 5.70744e+06 23010 4.01172e+07 0 0.166829 0.987957 0.799314 8.07706e+07 0.00523665 1.73349e+07 7.36872e+06 1.75093e+07 163 1.75359e+07 1.56899e+07 0.00491698 1.7514e+07 49.9688 0.00388407 0.99054 0 50.2502 GTEX-131YS-1426-SM-5IJF7 1 C1 6 pieces 6.4 Esophagus Esophagus - Mucosa 0006920 994 968 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986574 213274 0.97313 0.988526 0.800235 23242 1 76 0.00488713 160 0 8.13659e+07 0.0265839 523903 8.23103e+07 5.47956e+06 23263 4.04526e+07 0 0.172895 0.988526 0.791053 8.13659e+07 0.005173 1.80295e+07 9.8807e+06 1.82501e+07 175 1.82853e+07 1.33909e+07 0.00502978 1.81531e+07 49.8186 0.00636497 0.990478 0 50.304 GTEX-131YS-1626-SM-5HL6C 1 C1 3 pieces; accentuation of portal tracts with fibrosis and congestion 6 Liver Liver 0001114 997 966 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991674 251280 0.967045 0.993619 0.789062 21449 1 76 0.00229974 126 0 6.47879e+07 0.0328423 1.48493e+06 6.52039e+07 6.71644e+06 21468 3.22507e+07 0 0.177983 0.993619 0.784027 6.47879e+07 0.0033218 1.41234e+07 1.29096e+07 1.41882e+07 162 1.41602e+07 8.04571e+06 0.00280977 1.42597e+07 50.1751 0.0227736 0.995564 0 50.1144 GTEX-131YS-1726-SM-5HL7G 1 C1 2 pieces; minimal fibrovascular component 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 999 964 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989044 238494 0.97305 0.992011 0.786627 23845 1 76 0.00223582 165 0 7.46566e+07 0.0266879 604785 7.52578e+07 7.08251e+06 23870 3.71243e+07 0 0.186423 0.992011 0.780342 7.46566e+07 0.00327937 1.6375e+07 8.77309e+06 1.65492e+07 180 1.65835e+07 1.16565e+07 0.00275604 1.65495e+07 49.9486 0.00803617 0.994977 0 50.2646 GTEX-131YS-2026-SM-5P9J8 1 C1 2 pieces; well trimmed; one includes portion of cortical nodule; cortex and medulla with central adrenal vein; one with attached nerves and ganglion (outlined) 5.8 Adrenal Gland Adrenal Gland 0002369 1003 962 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990033 893405 0.946889 0.990628 0.779563 24047 1 76 0.00341875 271 0 9.97787e+07 0.0528866 5.0309e+06 1.00723e+08 3.30488e+06 24081 4.96978e+07 0 0.167325 0.990628 0.772258 9.97787e+07 0.00373225 2.11989e+07 3.58691e+07 2.16575e+07 286 2.15187e+07 1.30112e+07 0.0035754 2.14076e+07 49.8706 0.0499481 0.991224 0 50.5351 GTEX-131YS-2226-SM-5P9G8 0 C1 2 pieces; multiple corpora albicantia 6.7 Ovary Ovary 0000992 1006 960 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990031 1.25373e+06 0.924654 0.989996 0.648598 25067 1 76 0.00316514 176 0 1.0382e+08 0.0750689 304093 1.04869e+08 3.78302e+06 25123 5.16172e+07 0 0.276056 0.989996 0.64211 1.0382e+08 0.00386095 2.17192e+07 5.3737e+07 2.20264e+07 192 2.19667e+07 1.53307e+07 0.00351306 2.18234e+07 49.8363 0.00289974 0.989962 0 50.3511 GTEX-131YS-2326-SM-5IJFJ 1 C1 2 pieces; endometrium not included 5.8 Uterus Uterus 0000995 1009 957 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.983729 243864 0.966147 0.985816 0.75039 24460 1 76 0.00490915 159 0 8.80841e+07 0.0335809 244443 8.93515e+07 6.32622e+06 24505 4.37049e+07 0 0.215757 0.985816 0.739746 8.80841e+07 0.00544712 1.9203e+07 8.95172e+06 1.93414e+07 171 1.93745e+07 1.45214e+07 0.00517756 1.93568e+07 49.9771 0.00273575 0.987902 0 50.1795 GTEX-131YS-2426-SM-5J2OD 1 C1 6 pieces; some sloughing and atrophy of squamous epithelium 6.2 Vagina Vagina 0000996 1010 957 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982931 172335 0.965549 0.986797 0.726796 25709 1 76 0.00448409 159 0 8.70106e+07 0.0341778 365058 8.81748e+07 4.72243e+06 25754 4.3153e+07 0 0.238754 0.986797 0.7172 8.70106e+07 0.00628491 1.90448e+07 8.45036e+06 1.90903e+07 165 1.91783e+07 1.3367e+07 0.00538097 1.92783e+07 50.13 0.00414016 0.990662 0 50.0597 GTEX-131YS-2826-SM-5EQ47 1 C1 6 pieces; hair bearing skin with ~20% external/internal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1021 948 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989395 473932 0.973085 0.992474 0.777954 23773 1 76 0.00199966 157 0 7.05183e+07 0.0266982 289784 7.10531e+07 7.84885e+06 23805 3.50286e+07 0 0.195131 0.992474 0.772099 7.05183e+07 0.00333734 1.54871e+07 7.14423e+06 1.56408e+07 161 1.56506e+07 1.20804e+07 0.00266643 1.56866e+07 50.0573 0.00407842 0.995552 0 50.2469 GTEX-131YS-2926-SM-5EGKI 1 C1 6 pieces; well trimmed 6.4 Colon Colon - Sigmoid 0001159 1024 945 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989876 230851 0.971218 0.992628 0.812918 22282 1 76 0.0019348 140 0 6.64307e+07 0.0285453 497471 6.69241e+07 5.67247e+06 22305 3.30416e+07 0 0.1583 0.992628 0.806925 6.64307e+07 0.00319019 1.41564e+07 6.05602e+06 1.4327e+07 157 1.43288e+07 1.13084e+07 0.00256076 1.43262e+07 49.9955 0.00743336 0.995379 0 50.2995 GTEX-131YS-3026-SM-5EGHY 2 C1 6 pieces; Purkinje cells well visualized and with evidence of hypoxic damage, some attached meninges 6.9 Brain Brain - Cerebellum 0002037 1026 944 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.979536 339338 0.942761 0.985688 0.684337 24767 1 76 0.00287105 126 0 7.68886e+07 0.0569362 1.08308e+06 7.80051e+07 1.35776e+07 24798 3.80791e+07 0 0.258424 0.985688 0.674542 7.68886e+07 0.00617054 1.64974e+07 1.60484e+07 1.65937e+07 159 1.67484e+07 8.77681e+06 0.0045105 1.67762e+07 50.0415 0.0138848 0.99184 0 50.1455 GTEX-131YS-3126-SM-5KLYT 1 C1 4 pieces, some attached meninges 6.6 Brain Brain - Cortex 0001870 1029 941 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987241 342108 0.964499 0.989619 0.838427 23536 1 76 0.00394883 268 0 8.19475e+07 0.0351571 2.72224e+06 8.28071e+07 3.79375e+06 23550 4.07499e+07 0 0.126072 0.989619 0.829724 8.19475e+07 0.00509128 1.78485e+07 1.81078e+07 1.80707e+07 261 1.80182e+07 9.45611e+06 0.00451868 1.80769e+07 50.0813 0.0328745 0.991998 0 50.3094 GTEX-131YS-3226-SM-5IFGV 1 C1 1 piece; adenohypophysis and neurohypophysis 5.9 Pituitary Pituitary 0000007 1030 940 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989427 306886 0.956332 0.992402 0.770807 24324 1 76 0.00233514 132 0 6.56865e+07 0.043411 287475 6.61894e+07 7.66537e+06 24349 3.26673e+07 0 0.185525 0.992402 0.764951 6.56865e+07 0.00372323 1.36902e+07 1.23996e+07 1.37792e+07 143 1.38322e+07 1.11482e+07 0.0030271 1.38234e+07 49.984 0.00434322 0.995377 0 50.162 GTEX-132AR-0002-SM-5DU51 C1 Blood Whole Blood 0013756 76 BP-42922 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-132AR-0006-SM-5NQ7N C1 8.6 Blood Whole Blood 0013756 76 BP-42921 RNA isolation_PAXgene Blood RNA (Manual) 08/30/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.99205 451560 0.968377 0.993227 0.812341 19916 1 76 0.0021006 127 0 6.93452e+07 0.0312588 980617 6.98181e+07 5.52233e+06 19927 3.45583e+07 0 0.156036 0.993227 0.806839 6.93452e+07 0.00299183 1.55155e+07 4.04453e+07 1.56811e+07 144 1.56781e+07 1.46978e+07 0.00254569 1.56091e+07 49.8896 0.0140453 0.994403 0 50.2655 GTEX-132AR-0008-SM-62LDH C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 80 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990498 473889 0.975189 0.993735 0.8352 21695 1 76 0.00240582 290 0 1.03027e+08 0.0244814 305942 1.03677e+08 7.06137e+06 21716 5.12613e+07 0 0.139989 0.993735 0.829968 1.03027e+08 0.00286581 2.29944e+07 1.52036e+07 2.30849e+07 263 2.31702e+07 2.55591e+07 0.00263507 2.32226e+07 50.0565 0.00295092 0.996973 0 50.0981 GTEX-132AR-0226-SM-5IJBE 1 C1 2 pieces; 1 pure fat, 1 has 20% fibrous tissue 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 83 900 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990908 261731 0.978062 0.993466 0.822566 22914 1 76 0.00215853 211 0 8.606e+07 0.0216935 371019 8.66261e+07 1.06622e+07 22937 4.28212e+07 0 0.155496 0.993466 0.817191 8.606e+07 0.00369771 1.90458e+07 8.4979e+06 1.914e+07 228 1.91305e+07 1.58537e+07 0.00292614 1.92664e+07 50.177 0.004283 0.996023 0 50.1234 GTEX-132AR-0326-SM-5KM2C 1 C1 6 pieces; well trimmed; 10% intradermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 85 898 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98508 169621 0.969524 0.988109 0.78107 24121 1 76 0.0039908 153 0 7.39315e+07 0.0303241 684744 7.48212e+07 3.62087e+06 24150 3.67302e+07 0 0.188454 0.988109 0.771782 7.39315e+07 0.00537884 1.62441e+07 8.01379e+06 1.64539e+07 168 1.63815e+07 1.05724e+07 0.00468269 1.65328e+07 50.2298 0.00915174 0.991138 0 50.3208 GTEX-132AR-0426-SM-5IFH8 1 C1 2 pieces; many Mallory alcoholic hyalin bodies, bridging fibrosis, >90% macro and microsteatosis 6.8 Liver Liver 0001114 86 898 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990159 274052 0.971895 0.993073 0.818505 22790 1 76 0.00229963 137 0 7.30382e+07 0.0271707 1.97241e+06 7.35477e+07 8.53801e+06 22807 3.63099e+07 0 0.153389 0.993073 0.812836 7.30382e+07 0.00365393 1.60865e+07 1.02541e+07 1.61223e+07 163 1.61656e+07 1.40574e+07 0.0029748 1.62489e+07 50.1284 0.0268181 0.995986 0 50.0555 GTEX-132AR-0526-SM-5J2MJ 1 C1 2 pieces; no peritonitis 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 89 896 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984154 218084 0.977718 0.988309 0.832154 23623 1 76 0.00429606 166 0 8.69307e+07 0.021976 938477 8.7959e+07 4.77102e+06 23645 4.31564e+07 0 0.145564 0.988309 0.822425 8.69307e+07 0.00599794 1.92415e+07 9.31913e+06 1.93498e+07 181 1.94323e+07 1.70722e+07 0.00514342 1.95003e+07 50.0874 0.0106695 0.992465 0 50.1404 GTEX-132AR-0726-SM-5EQ6J 1 C1 2 pieces; well trimmed, no lesions 7.8 Blood Vessel Artery - Tibial 0007610 91 895 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.992041 216449 0.976861 0.99428 0.854743 20377 1 76 0.00182251 133 0 6.2664e+07 0.0228265 224519 6.30245e+07 7.90907e+06 20387 3.11886e+07 0 0.122118 0.99428 0.849854 6.2664e+07 0.00278107 1.35951e+07 5.19071e+06 1.37668e+07 148 1.37352e+07 1.29576e+07 0.00230071 1.37619e+07 50.0486 0.00356241 0.996518 0 50.3138 GTEX-132AR-0826-SM-5EGK6 1 C1 2 pieces; atrophic ducts, no lobules; nerves in 1 piece = 10% (delineated) 7.7 Breast Breast - Mammary Tissue 0008367 92 895 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.991108 248205 0.976526 0.993422 0.816659 22533 1 76 0.00187267 162 0 7.10604e+07 0.0232399 699675 7.15309e+07 6.09341e+06 22545 3.53701e+07 0 0.159866 0.993422 0.811287 7.10604e+07 0.00285267 1.56886e+07 7.53087e+06 1.57746e+07 176 1.57541e+07 1.23726e+07 0.00236153 1.5866e+07 50.177 0.00978143 0.995736 0 50.1367 GTEX-132AR-1026-SM-5PNVL 1 C1 2 pieces; focal atrophy 8.7 Muscle Muscle - Skeletal 0011907 97 891 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993195 171776 0.978337 0.994611 0.852828 20304 1 76 0.0017621 151 0 6.57057e+07 0.0214229 376488 6.60617e+07 6.15182e+06 20315 3.27499e+07 0 0.125509 0.994611 0.848233 6.57057e+07 0.00251724 1.43721e+07 6.72272e+06 1.45193e+07 163 1.44808e+07 1.34136e+07 0.00213913 1.4497e+07 50.0278 0.00569904 0.996028 0 50.2549 GTEX-132AR-1126-SM-5P9GA 1 C1 2 pieces; focal atrophy 7.3 Thyroid Thyroid 0002046 99 890 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991761 329998 0.965723 0.992007 0.759261 25049 1 76 0.00295313 206 0 9.90765e+07 0.0339403 1.56214e+06 9.98748e+07 3.25801e+06 25093 4.93098e+07 0 0.206462 0.992007 0.753192 9.90765e+07 0.00362488 2.17761e+07 9.66809e+06 2.19319e+07 247 2.18368e+07 1.53444e+07 0.00328892 2.18968e+07 50.0686 0.015641 0.992253 0 50.1782 GTEX-132AR-1326-SM-5K7YC 1 C1 2 pieces; 40 & 80% external fat 7.1 Blood Vessel Artery - Coronary 0001621 103 888 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819,LCSET-5258 03/29/2014 TruSeq.v1 RNASEQ 0.989412 166751 0.979091 0.992059 0.865822 21929 1 76 0.00228745 200 0 8.036e+07 0.0206405 779833 8.10032e+07 1.05583e+07 21944 3.99905e+07 0 0.113268 0.992059 0.858947 8.036e+07 0.0035795 1.77397e+07 9.09099e+06 1.78913e+07 211 1.78838e+07 1.5265e+07 0.00293175 1.79551e+07 50.0994 0.00962719 0.994707 0 50.2128 GTEX-132AR-1426-SM-5IFF1 0 C1 2 pieces; atrophic 7.9 Ovary Ovary 0000992 104 887 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990153 192688 0.96471 0.992945 0.742422 22980 1 76 0.00214102 136 0 6.83182e+07 0.0350785 504178 6.88036e+07 7.57006e+06 23017 3.39869e+07 0 0.222288 0.992945 0.737184 6.83182e+07 0.00356723 1.4996e+07 8.08157e+06 1.51072e+07 144 1.5137e+07 1.17741e+07 0.00285212 1.5151e+07 50.0231 0.00732778 0.995737 0 50.1847 GTEX-132AR-1526-SM-5KM1L 0 C1 2 pieces; myometrium only (in this cut) 7 Uterus Uterus 0000995 107 885 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986577 133798 0.967764 0.988825 0.746739 23641 1 76 0.00382412 138 0 7.59041e+07 0.0320368 692257 7.67619e+07 3.46185e+06 23675 3.77464e+07 0 0.221025 0.988825 0.738394 7.59041e+07 0.00483061 1.66975e+07 8.24175e+06 1.6816e+07 156 1.68209e+07 1.16166e+07 0.00432622 1.68566e+07 50.0529 0.00901823 0.991073 0 50.1769 GTEX-132AR-1526-SM-DLIPN 0 C1 2 pieces; myometrium only (in this cut) Uterus Uterus 0000995 107 885 BP-49023 DNA Extraction from Paxgene-derived Lysate Plate Based 02/03/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-132AR-1626-SM-5EGHP 1 C1 6 pieces 8.9 Vagina Vagina 0000996 109 883 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.985128 188409 0.970351 0.989551 0.778497 21062 1 76 0.00244665 115 0 5.3187e+07 0.0294376 662436 5.37486e+07 8.26939e+06 21073 2.64176e+07 0 0.191854 0.989551 0.770363 5.3187e+07 0.0054457 1.18089e+07 1.07084e+07 1.19444e+07 115 1.20158e+07 9.64903e+06 0.00393947 1.19671e+07 49.8984 0.0123247 0.993973 0 50.2854 GTEX-132AR-1726-SM-5EGHQ 2 C1 2 pieces; atrophic 8.2 Adrenal Gland Adrenal Gland 0002369 111 882 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985448 226587 0.971875 0.990451 0.803424 23068 1 76 0.00231624 136 0 6.4785e+07 0.0279022 1.81468e+06 6.54096e+07 1.00639e+07 23092 3.21613e+07 0 0.168451 0.990451 0.795752 6.4785e+07 0.00542586 1.43631e+07 9.12678e+06 1.44386e+07 145 1.4528e+07 1.14988e+07 0.00386319 1.45804e+07 50.09 0.0277434 0.995455 0 50.1311 GTEX-132AR-1826-SM-5EGHR 1 C1 2 pieces; fibrosis 7.8 Pancreas Pancreas 0001150 113 880 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764,LCSET-5055 02/26/2014 TruSeq.v1 RNASEQ 0.98565 255805 0.975151 0.989112 0.829052 22529 1 76 0.00255008 110 0 7.97853e+07 0.0246139 748284 8.06636e+07 1.02993e+07 22551 3.96649e+07 0 0.146099 0.989112 0.820025 7.97853e+07 0.00479138 1.82379e+07 2.22709e+07 1.8232e+07 136 1.82623e+07 2.12384e+07 0.00366681 1.84797e+07 50.2959 0.00927661 0.992574 0 49.9918 GTEX-132AR-1926-SM-5EGK5 0 C1 2 pieces; 20% external fat 8.2 Heart Heart - Atrial Appendage 0006631 116 878 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988357 350345 0.978692 0.992303 0.829831 21832 1 76 0.00185288 197 0 7.98291e+07 0.0210671 3.71242e+06 8.04483e+07 7.91536e+06 21851 3.96733e+07 0 0.148861 0.992303 0.823443 7.98291e+07 0.00286664 1.69005e+07 1.36506e+07 1.69817e+07 246 1.69526e+07 1.30492e+07 0.00235774 1.72122e+07 50.3799 0.0461467 0.996248 0 50.1198 GTEX-132AR-2026-SM-5IJG4 0 C1 2 pieces 7.3 Heart Heart - Left Ventricle 0006566 118 876 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.989717 127191 0.98396 0.991173 0.840885 21452 1 76 0.00465026 266 0 8.81097e+07 0.015872 6.02081e+06 8.88943e+07 5.89607e+06 21463 4.38697e+07 0 0.143075 0.991173 0.833463 8.81097e+07 0.00470663 1.95136e+07 1.87622e+07 1.96485e+07 256 1.95507e+07 1.22538e+07 0.0046784 1.97491e+07 50.2525 0.0677299 0.992629 0 50.1723 GTEX-132AR-2126-SM-5K7XG 0 C1 6 pieces; no plaques; well trimmed 7.8 Blood Vessel Artery - Aorta 0001496 120 875 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990987 147117 0.975702 0.993568 0.838802 21116 1 76 0.0026216 132 0 5.99952e+07 0.0239511 310404 6.03836e+07 1.04259e+07 21131 2.98511e+07 0 0.136901 0.993568 0.833406 5.99952e+07 0.00398334 1.31531e+07 6.85979e+06 1.32994e+07 141 1.33058e+07 1.17571e+07 0.0033007 1.32965e+07 49.9826 0.00514054 0.996149 0 50.2764 GTEX-132AR-2226-SM-5J2NT 0 C1 6 pieces; well dissected 9 Esophagus Esophagus - Mucosa 0006920 121 875 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982258 222537 0.973209 0.986472 0.820442 22779 1 76 0.00458053 168 0 9.03876e+07 0.0262814 962814 9.16272e+07 4.9114e+06 22793 4.48754e+07 0 0.152767 0.986472 0.809343 9.03876e+07 0.00621376 2.0171e+07 1.72248e+07 2.03134e+07 187 2.04248e+07 1.74242e+07 0.00539365 2.04249e+07 50.0001 0.010508 0.990687 0 50.1759 GTEX-132AR-2326-SM-5IJDY 0 C1 6 pieces; well dissected 7.9 Esophagus Esophagus - Muscularis 0004648 123 873 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987188 224359 0.972317 0.989069 0.8131 24014 1 76 0.00466921 279 0 1.07276e+08 0.0274509 2.43873e+06 1.08461e+08 7.00677e+06 24045 5.33444e+07 0 0.159218 0.989069 0.804211 1.07276e+08 0.00499144 2.3497e+07 1.57508e+07 2.38147e+07 281 2.37795e+07 1.74564e+07 0.00483002 2.37301e+07 49.948 0.0224848 0.99095 0 50.3357 GTEX-132AR-2426-SM-5IFFD 2 C1 6 pieces; well dissected 6.5 Stomach Stomach 0000945 125 872 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988724 212155 0.969194 0.991941 0.770507 23587 1 76 0.00225951 158 0 5.88634e+07 0.0305628 712934 5.93416e+07 6.33816e+06 23610 2.9251e+07 0 0.198687 0.991941 0.764298 5.88634e+07 0.00387251 1.3126e+07 1.60464e+07 1.31455e+07 140 1.31834e+07 1.04514e+07 0.00306339 1.3275e+07 50.1732 0.0120141 0.995158 0 50.0371 GTEX-132AR-2526-SM-5PNVM 1 C1 6 pieces; well dissected 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 127 871 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990803 164356 0.971231 0.992763 0.798503 21636 1 76 0.00199248 122 0 5.45866e+07 0.0285424 847481 5.49845e+07 4.69885e+06 21655 2.71748e+07 0 0.172728 0.992763 0.792725 5.45866e+07 0.00311479 1.2025e+07 7.10051e+06 1.20686e+07 133 1.20528e+07 9.02983e+06 0.00255253 1.21442e+07 50.1889 0.0154131 0.994723 0 50.0905 GTEX-132AR-2726-SM-5PNVN 1 C1 6 pieces; well dissected full thickness mucosa & muscle 8.2 Colon Colon - Transverse 0001157 131 868 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991564 188718 0.970068 0.993097 0.801118 22438 1 76 0.00254747 140 0 6.1911e+07 0.0275889 1.3305e+06 6.23414e+07 5.42649e+06 22452 3.07705e+07 0 0.168949 0.993097 0.795588 6.1911e+07 0.0034859 1.37539e+07 7.87282e+06 1.38673e+07 147 1.38211e+07 9.81446e+06 0.00301596 1.38883e+07 50.1211 0.0213421 0.994629 0 50.2052 GTEX-132AR-2826-SM-5IJFV 1 C1 6 pieces; 3 have extraneous fat 5.9 Colon Colon - Sigmoid 0001159 134 866 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.988681 228438 0.975463 0.990332 0.822168 23936 1 76 0.00456572 280 0 1.03611e+08 0.0242612 1.32384e+06 1.04623e+08 6.7706e+06 23968 5.15411e+07 0 0.153295 0.990332 0.814219 1.03611e+08 0.0047034 2.28746e+07 1.29742e+07 2.3057e+07 270 2.30545e+07 1.85765e+07 0.00463445 2.30435e+07 49.9881 0.0126534 0.991983 0 50.1985 GTEX-132NY-0001-SM-5GYA3 C1 Blood Whole Blood 0013756 485 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-132NY-0001-SM-7DRPZ C1 Blood Whole Blood 0013756 485 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-132NY-0005-SM-5O9AC C1 7.8 Blood Whole Blood 0013756 485 BP-42988 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.984286 545306 0.970999 0.987451 0.779235 18530 1 76 0.00248387 115 0 7.57347e+07 0.0283597 232992 7.66972e+07 1.02696e+07 18539 3.76401e+07 0 0.191763 0.987451 0.769457 7.57347e+07 0.00448862 1.7061e+07 7.30381e+07 1.71922e+07 134 1.71809e+07 1.64742e+07 0.00348303 1.73257e+07 50.2098 0.00303782 0.990616 0 50.1915 GTEX-132NY-0008-SM-62LFX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 493 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990112 531542 0.972929 0.993178 0.843531 20772 1 76 0.00238612 188 0 8.57338e+07 0.0267642 394104 8.63227e+07 6.1129e+06 20791 4.26604e+07 0 0.129398 0.993178 0.837776 8.57338e+07 0.00280045 1.91397e+07 1.55365e+07 1.91917e+07 185 1.92389e+07 2.17103e+07 0.00259265 1.93416e+07 50.1331 0.00456547 0.996243 0 50.0679 GTEX-132NY-0326-SM-5IJBL 0 C1 6 pieces, no dermal fat, squamous epithelium is ~40-50 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 492 1052 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988564 198219 0.971098 0.991437 0.788769 23317 1 76 0.00230691 163 0 6.9542e+07 0.0286916 372110 7.01426e+07 8.79841e+06 23340 3.45808e+07 0 0.182329 0.991437 0.782015 6.9542e+07 0.00418706 1.52502e+07 8.88244e+06 1.52265e+07 164 1.52366e+07 1.10332e+07 0.00324426 1.5432e+07 50.3187 0.00530505 0.994311 0 49.9612 GTEX-132NY-0526-SM-5EQ4V 0 C1 2 pieces, generally clean specimens, focal adherent fat, up to ~0.5mm 6.9 Nerve Nerve - Tibial 0001323 497 1048 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.990724 285870 0.968287 0.993107 0.754871 23850 1 76 0.00202993 147 0 6.97354e+07 0.0314657 325198 7.02194e+07 8.39488e+06 23883 3.46864e+07 0 0.213416 0.993107 0.749668 6.97354e+07 0.00314539 1.53029e+07 7.00491e+06 1.5435e+07 158 1.54188e+07 1.08338e+07 0.00258632 1.54782e+07 50.0962 0.00463117 0.99549 0 50.215 GTEX-132NY-0626-SM-5L3D9 1 C1 2 pieces, clean specimens, no adherent fat 7.9 Blood Vessel Artery - Tibial 0007610 498 1048 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988737 179163 0.97632 0.992515 0.833553 21038 1 76 0.00300993 166 0 7.81475e+07 0.023306 368275 7.87368e+07 7.88231e+06 21055 3.88276e+07 0 0.142767 0.992515 0.827314 7.81475e+07 0.00394406 1.67495e+07 5.6862e+06 1.68374e+07 171 1.68764e+07 1.57688e+07 0.00347521 1.69798e+07 50.1528 0.00467729 0.996294 0 50.1309 GTEX-132NY-0726-SM-5KLZM 0 C1 2 pieces, minimal (~5%) interstitial fat, rep. delineated 7 Muscle Muscle - Skeletal 0011907 500 1047 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988992 153921 0.983456 0.991254 0.868143 20614 1 76 0.00349538 199 0 8.57072e+07 0.0163173 1.08736e+06 8.64634e+07 3.88854e+06 20626 4.26637e+07 0 0.115313 0.991254 0.86055 8.57072e+07 0.00443112 1.85922e+07 1.07555e+07 1.87527e+07 231 1.87161e+07 1.75764e+07 0.00396218 1.88019e+07 50.1143 0.0125759 0.993515 0 50.2149 GTEX-132NY-0826-SM-5K7Y7 1 C1 2 pieces, fibroadipose tissue, no ductal elements 5.9 Breast Breast - Mammary Tissue 0008367 572 975 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989253 133020 0.974327 0.991852 0.789002 22467 1 76 0.00265338 131 0 6.07883e+07 0.0254355 233091 6.12877e+07 1.05338e+07 22495 3.02394e+07 0 0.185325 0.991852 0.782573 6.07883e+07 0.00406408 1.3388e+07 6.43292e+06 1.34179e+07 145 1.34276e+07 9.65765e+06 0.00335688 1.35321e+07 50.194 0.00380323 0.994451 0 50.0556 GTEX-132NY-0926-SM-5P9G3 1 C1 2 pieces, minimal steatosis 7.4 Liver Liver 0001114 576 972 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992705 354044 0.975515 0.993059 0.824684 22691 1 76 0.00287352 273 0 1.391e+08 0.0233015 1.5024e+06 1.40073e+08 4.30078e+06 22716 6.92436e+07 0 0.150831 0.993059 0.818959 1.391e+08 0.00334695 2.98688e+07 2.65982e+07 2.99553e+07 329 2.99593e+07 2.71868e+07 0.00311015 2.99118e+07 49.9604 0.0107259 0.993413 0 50.0723 GTEX-132NY-1026-SM-5P9IY 1 C1 2 pieces, no significant abnormalities 6.9 Thyroid Thyroid 0002046 579 969 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991212 326990 0.957206 0.991598 0.711534 25240 1 76 0.00333685 162 0 9.02581e+07 0.0425587 357156 9.10229e+07 3.12847e+06 25286 4.49341e+07 0 0.245672 0.991598 0.705556 9.02581e+07 0.00360182 1.95767e+07 1.19306e+07 1.97069e+07 195 1.96409e+07 1.21752e+07 0.00346928 1.96814e+07 50.0514 0.00392381 0.991983 0 50.1657 GTEX-132NY-1126-SM-5PNVE 1 C1 2 pieces, !0-20% fibrovascular tissue, delineated 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 580 969 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99174 193412 0.972589 0.993107 0.792505 23385 1 76 0.00200013 159 0 6.9097e+07 0.0271483 400822 6.95766e+07 6.38515e+06 23412 3.44223e+07 0 0.180084 0.993107 0.787043 6.9097e+07 0.0029657 1.51789e+07 7.98997e+06 1.53426e+07 166 1.53119e+07 1.1346e+07 0.00248225 1.53027e+07 49.9851 0.00576087 0.994474 0 50.2682 GTEX-132NY-1226-SM-5PNVF 1 C1 2 pieces, perimortem apsirated foreign material, vegetable/anlmal matter, delinetaed. No significant inflammatory reaction 7.4 Lung Lung 0008952 582 968 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991213 159298 0.976881 0.992688 0.788256 21579 1 76 0.00206666 122 0 5.39236e+07 0.0228594 203429 5.43208e+07 5.13776e+06 21589 2.68393e+07 0 0.188626 0.992688 0.782492 5.39236e+07 0.00324339 1.19369e+07 5.5761e+06 1.20501e+07 132 1.19909e+07 8.96998e+06 0.00265415 1.20805e+07 50.1861 0.00374496 0.994164 0 50.2359 GTEX-132NY-1426-SM-5J1MJ 1 C1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 585 967 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990324 253485 0.974664 0.992155 0.813841 23337 1 76 0.00384059 197 0 9.25248e+07 0.0247034 785574 9.32564e+07 4.86222e+06 23364 4.60187e+07 0 0.160822 0.992155 0.807457 9.25248e+07 0.00449544 1.97078e+07 8.09256e+06 1.97914e+07 204 1.9805e+07 1.8035e+07 0.00416741 1.98477e+07 50.0539 0.00842381 0.993985 0 50.1058 GTEX-132NY-1726-SM-5EGKK 1 C1 2 pieces, minimal fibrosis 7.6 Heart Heart - Left Ventricle 0006566 592 962 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.99007 299355 0.982057 0.993257 0.854489 21382 1 76 0.00166369 198 0 8.16087e+07 0.0177159 1.82181e+06 8.21627e+07 7.81164e+06 21394 4.05889e+07 0 0.127568 0.993257 0.848727 8.16087e+07 0.00270116 1.81308e+07 1.2272e+07 1.80652e+07 245 1.82166e+07 1.57858e+07 0.00218076 1.82139e+07 49.9963 0.0221732 0.996444 0 49.9093 GTEX-132NY-2026-SM-5L3FM 1 C1 6 pieces, all muscularis, good specimens 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 596 959 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.984987 217544 0.971328 0.989654 0.827814 22169 1 76 0.00309593 142 0 6.46382e+07 0.0284676 1.00731e+06 6.5314e+07 6.68046e+06 22187 3.20757e+07 0 0.143514 0.989654 0.81925 6.46382e+07 0.00460357 1.40151e+07 6.17332e+06 1.40963e+07 159 1.41126e+07 1.02795e+07 0.0038462 1.42763e+07 50.2884 0.0154226 0.994321 0 50.1444 GTEX-132NY-2226-SM-5J2LZ 1 C1 2 pieces, all cortex, ~40% adherent fat, delineated 6.4 Adrenal Gland Adrenal Gland 0002369 601 956 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981294 433853 0.966177 0.985609 0.797926 23322 1 76 0.00432106 201 0 9.22661e+07 0.0336177 3.13143e+06 9.36133e+07 5.35739e+06 23353 4.57279e+07 0 0.168251 0.985609 0.786443 9.22661e+07 0.0063368 1.99052e+07 1.50789e+07 2.01467e+07 225 2.01948e+07 1.21013e+07 0.00532452 2.0232e+07 50.046 0.0334507 0.989923 0 50.3015 GTEX-132NY-2726-SM-5PNY2 1 C1 6 pieces all musculars 6.6 Colon Colon - Sigmoid 0001159 613 948 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989711 307975 0.970066 0.990383 0.814231 23702 1 76 0.00314505 276 0 1.04146e+08 0.0296983 803733 1.05157e+08 3.33927e+06 23730 5.18249e+07 0 0.155835 0.990383 0.8064 1.04146e+08 0.0037852 2.23316e+07 9.51313e+06 2.26045e+07 292 2.24478e+07 1.75729e+07 0.00346491 2.25656e+07 50.1308 0.00764314 0.991054 0 50.3036 GTEX-132NY-2826-SM-5P9G2 2 C1 2 pieces, galndular hyperplasia 6.6 Prostate Prostate 0002367 616 946 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.986289 2.00057e+06 0.907443 0.986544 0.704721 25793 1 76 0.00306995 272 0 1.08229e+08 0.0922722 1.95698e+06 1.09705e+08 4.02879e+06 25833 5.38263e+07 0 0.202722 0.986544 0.695238 1.08229e+08 0.0039211 2.23532e+07 7.75204e+07 2.28278e+07 330 2.26855e+07 1.11399e+07 0.00349542 2.25791e+07 49.8824 0.0178386 0.9868 0 50.5253 GTEX-132Q8-0004-SM-5DU3I C1 Blood Whole Blood 0013756 719 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-132Q8-0004-SM-7DRQB C1 Blood Whole Blood 0013756 719 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-132Q8-0006-SM-5NQA4 C1 8.2 Blood Whole Blood 0013756 719 BP-42988 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.949763 670008 0.969491 0.953163 0.769275 18038 1 76 0.00241266 111 0 1.02233e+08 0.0281246 127468 1.07257e+08 1.6661e+07 18046 5.07236e+07 0 0.200216 0.953163 0.733244 1.02233e+08 0.00607791 2.38317e+07 1.82252e+08 2.38935e+07 157 2.38679e+07 2.61648e+07 0.00423875 2.42431e+07 50.3899 0.00118844 0.956562 0 50.0647 GTEX-132Q8-0008-SM-5ZZUC C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 780 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994966 411228 0.973499 0.996019 0.843358 20703 1 76 0.0017436 182 0 8.13381e+07 0.0261461 419850 8.16632e+07 7.07057e+06 20725 4.05633e+07 0 0.130141 0.996019 0.84 8.13381e+07 0.00266549 1.81432e+07 1.35999e+07 1.82021e+07 176 1.81811e+07 2.06508e+07 0.00220406 1.82534e+07 50.0993 0.00514124 0.997071 0 50.081 GTEX-132Q8-0011-R10b-SM-5DUWZ C1, A1 9.1 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.990346 663551 0.950961 0.992801 0.825601 22897 1 76 0.00196479 151 0 6.09696e+07 0.0485986 2.07886e+06 6.14117e+07 5.30977e+06 22911 3.03328e+07 0 0.12536 0.992801 0.819657 6.09696e+07 0.00309872 1.32083e+07 1.66789e+07 1.32524e+07 169 1.32282e+07 8.01295e+06 0.00253035 1.33868e+07 50.2981 0.0338511 0.995257 0 50.0833 GTEX-132Q8-0011-R11b-SM-5DUW9 C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 725 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.983422 714212 0.93035 0.98788 0.750603 22723 1 76 0.00223649 202 0 7.80529e+07 0.0693762 1.96522e+06 7.90106e+07 8.00598e+06 22750 3.87378e+07 0 0.179747 0.98788 0.741506 7.80529e+07 0.00355916 1.64149e+07 2.66626e+07 1.67212e+07 231 1.67573e+07 7.73985e+06 0.00289484 1.67002e+07 49.9148 0.0248729 0.992337 0 50.4622 GTEX-132Q8-0011-R1a-SM-5EGLK C1, A1 6.9 Brain Brain - Hippocampus 0001954 725 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989895 462426 0.964115 0.992645 0.824862 22964 1 76 0.00209493 268 0 7.66421e+07 0.0356406 6.4089e+06 7.721e+07 6.77071e+06 22984 3.81288e+07 0 0.139254 0.992645 0.818795 7.66421e+07 0.00325019 1.68307e+07 2.59691e+07 1.67694e+07 282 1.66945e+07 7.55428e+06 0.00267096 1.70954e+07 50.5932 0.0830061 0.995395 0 49.9088 GTEX-132Q8-0011-R2b-SM-5EQ5Z C1, A1 7.9 Brain Brain - Substantia nigra 0002038 725 BP-44999 RNA isolation_PAXgene Tissue miRNA 10/24/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.989681 585300 0.961859 0.993048 0.836674 22776 1 76 0.00201129 208 0 7.36446e+07 0.0378172 3.62139e+06 7.41602e+07 8.83574e+06 22793 3.65976e+07 0 0.125184 0.993048 0.830857 7.36446e+07 0.0032785 1.62335e+07 1.57571e+07 1.63864e+07 213 1.63048e+07 1.03012e+07 0.00264275 1.65561e+07 50.3824 0.048832 0.996414 0 50.2344 GTEX-132Q8-0011-R5a-SM-5IJDM C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 725 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.9914 544899 0.955939 0.993441 0.817102 24464 1 76 0.00233116 270 0 7.72468e+07 0.043774 3.19998e+06 7.77569e+07 9.6489e+06 24489 3.84548e+07 0 0.138837 0.993441 0.811742 7.72468e+07 0.00373715 1.69275e+07 1.78347e+07 1.68725e+07 256 1.68308e+07 9.78494e+06 0.00303271 1.71207e+07 50.427 0.0411537 0.995482 0 49.9186 GTEX-132Q8-0011-R6a-SM-5K7YN C1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 725 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4819,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.990793 532207 0.956623 0.992947 0.823813 24224 1 76 0.00239273 270 0 8.42939e+07 0.0430928 4.33765e+06 8.48926e+07 9.66534e+06 24246 4.19611e+07 0 0.13281 0.992947 0.818003 8.42939e+07 0.0033195 1.84448e+07 1.70612e+07 1.84209e+07 284 1.83875e+07 1.02462e+07 0.00285511 1.86532e+07 50.3587 0.0510957 0.995102 0 49.9676 GTEX-132Q8-0011-R7b-SM-5N9F1 C1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 725 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987451 2.72699e+06 0.951123 0.989215 0.827543 27774 1 76 0.00411238 527 0 2.66529e+08 0.0486288 1.94208e+07 2.69434e+08 1.42999e+07 27818 1.32492e+08 0 0.123579 0.989215 0.818619 2.66529e+08 0.00427935 5.68739e+07 9.9226e+07 5.84001e+07 463 5.78413e+07 2.78205e+07 0.00419572 5.78789e+07 50.0162 0.0720799 0.990979 0 50.662 GTEX-132Q8-0011-R8b-SM-5DUWX C1, A1 6 Brain Brain - Hypothalamus 0001898 725 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.984704 535354 0.958324 0.987578 0.84105 22171 1 76 0.00216643 197 0 6.56868e+07 0.0414719 5.44891e+06 6.6513e+07 5.85256e+06 22182 3.26812e+07 0 0.117274 0.987578 0.830603 6.56868e+07 0.0034454 1.44121e+07 2.35914e+07 1.4428e+07 231 1.43125e+07 5.59522e+06 0.00280405 1.46993e+07 50.6668 0.0819225 0.990453 0 50.0276 GTEX-132Q8-0526-SM-5IJBQ 1 C1 2 pieces; medial calcific sclerosis 6.2 Blood Vessel Artery - Tibial 0007610 793 844 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.985831 215769 0.974431 0.988994 0.745707 22005 1 76 0.00245417 160 0 8.08771e+07 0.02527 531218 8.17771e+07 9.62471e+06 22043 4.01366e+07 0 0.228724 0.988994 0.737499 8.08771e+07 0.00419976 1.76431e+07 7.32621e+06 1.77216e+07 176 1.77166e+07 1.28883e+07 0.00332417 1.78983e+07 50.2551 0.00649592 0.992158 0 50.1109 GTEX-132Q8-0626-SM-5L3F3 1 C1 2 pieces; both include up to 20-30% internal fat, some atrophic fibers 6.8 Muscle Muscle - Skeletal 0011907 795 843 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986678 198554 0.971635 0.99059 0.814677 20615 1 76 0.00300967 152 0 6.64646e+07 0.0281759 916217 6.70959e+07 6.076e+06 20633 3.30223e+07 0 0.156959 0.99059 0.807011 6.64646e+07 0.00393733 1.45264e+07 7.40581e+06 1.45719e+07 153 1.46282e+07 1.16263e+07 0.00347167 1.4703e+07 50.1275 0.0136553 0.994502 0 50.0782 GTEX-132Q8-1126-SM-5K7XS 1 C1 2 pieces; interstitial fibrosis, one is 40% fat, second is ~30% fat/fibrous with few collections of lymphocytes 7.3 Heart Heart - Atrial Appendage 0006631 807 834 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99093 107835 0.981549 0.993096 0.832352 20491 1 76 0.00257538 154 0 6.91512e+07 0.0181988 1.17634e+06 6.96319e+07 1.33044e+07 20504 3.44412e+07 0 0.149197 0.993096 0.826605 6.91512e+07 0.00362652 1.46961e+07 8.30851e+06 1.4578e+07 170 1.45686e+07 1.14586e+07 0.00309981 1.48386e+07 50.4591 0.0168937 0.995262 0 49.7982 GTEX-132Q8-1426-SM-5EGK7 1 C1 2 pieces; gynecomastoid change 5.7 Breast Breast - Mammary Tissue 0008367 816 827 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.988586 741189 0.935135 0.991278 0.673121 23969 1 76 0.00205698 133 0 6.92934e+07 0.0646277 662227 6.99031e+07 6.39789e+06 24007 3.44563e+07 0 0.262015 0.991278 0.66725 6.92934e+07 0.00307576 1.46798e+07 3.0043e+07 1.4902e+07 142 1.49258e+07 9.05686e+06 0.00256499 1.48399e+07 49.8558 0.0094735 0.99397 0 50.3756 GTEX-132Q8-1726-SM-5EGK8 1 C1 2 pieces 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 821 823 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.987695 299173 0.974667 0.990842 0.76615 23699 1 76 0.00215145 164 0 7.71692e+07 0.0247296 364423 7.78825e+07 7.10734e+06 23727 3.83348e+07 0 0.208517 0.990842 0.759134 7.71692e+07 0.00331726 1.69173e+07 8.61368e+06 1.7129e+07 177 1.71679e+07 1.24622e+07 0.00273251 1.71103e+07 49.916 0.00467914 0.993989 0 50.3108 GTEX-132Q8-1826-SM-5EGIY 1 C1 6 pieces; some dilated and congested vessels, epithelium partially sloughing 6.2 Esophagus Esophagus - Mucosa 0006920 822 823 BP-44901 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984744 207702 0.973087 0.989419 0.778015 23086 1 76 0.00247185 158 0 7.16496e+07 0.0267052 754782 7.24158e+07 1.015e+07 23117 3.55697e+07 0 0.195071 0.989419 0.769784 7.16496e+07 0.00573611 1.59906e+07 8.86373e+06 1.60337e+07 165 1.61041e+07 1.06101e+07 0.00409626 1.62345e+07 50.2015 0.0104229 0.994095 0 50.0673 GTEX-132Q8-2926-SM-5IFFP 2 C1 4 pieces; Purkinje cells well-visualized, ? hypoxic damage 6.6 Brain Brain - Cerebellum 0002037 841 810 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.98638 426840 0.935016 0.98978 0.702573 24118 1 76 0.00263633 155 0 7.75239e+07 0.0646536 1.2914e+06 7.83243e+07 8.90372e+06 24143 3.85202e+07 0 0.232443 0.98978 0.695393 7.75239e+07 0.00388385 1.64719e+07 2.23923e+07 1.67117e+07 178 1.67527e+07 8.44974e+06 0.00325794 1.6676e+07 49.8853 0.0164878 0.99318 0 50.3613 GTEX-132Q8-3026-SM-5PNVG 1 C1 4 pieces; attached meninges 6.9 Brain Brain - Cortex 0001870 844 807 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99279 316168 0.967214 0.994318 0.8267 24057 1 76 0.00210743 270 0 8.51362e+07 0.0324447 2.92046e+06 8.56227e+07 7.38472e+06 24083 4.24124e+07 0 0.140514 0.994318 0.822003 8.51362e+07 0.0030949 1.8662e+07 1.43758e+07 1.89176e+07 284 1.87973e+07 1.07699e+07 0.00260041 1.88993e+07 50.1354 0.0341085 0.995846 0 50.34 GTEX-132QS-0001-SM-62LDA B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1338 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988254 680311 0.971165 0.991715 0.770593 21509 1 76 0.00286019 178 0 9.57176e+07 0.028502 739650 9.65173e+07 7.09849e+06 21551 4.75862e+07 0 0.200572 0.991715 0.764208 9.57176e+07 0.00329283 2.13329e+07 1.35927e+07 2.14608e+07 200 2.15488e+07 2.09114e+07 0.00307575 2.15608e+07 50.014 0.00766339 0.995176 0 50.1495 GTEX-132QS-0003-SM-5DU49 B1 Blood Whole Blood 0013756 1338 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-132QS-0003-SM-7DROZ B1 Blood Whole Blood 0013756 1338 BP-42983 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/03/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-132QS-0005-SM-5LZXK B1 9.1 Blood Whole Blood 0013756 1338 BP-42988 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.987004 448684 0.970206 0.987923 0.814886 17552 1 76 0.00323649 104 0 6.90066e+07 0.0293775 151763 6.98502e+07 4.00841e+06 17555 3.43441e+07 0 0.15532 0.987923 0.805045 6.90066e+07 0.00371452 1.55568e+07 5.07208e+07 1.5784e+07 126 1.58048e+07 1.60227e+07 0.00347528 1.56078e+07 49.6864 0.00217269 0.988841 0 50.3624 GTEX-132QS-0008-SM-5ZZUB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1678 BP-46001 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995494 368421 0.978371 0.996377 0.851458 20704 1 76 0.00172604 224 0 9.00288e+07 0.0212686 285757 9.03561e+07 7.91039e+06 20714 4.49062e+07 0 0.126913 0.996377 0.848373 9.00288e+07 0.00259682 2.02939e+07 1.1813e+07 2.03421e+07 223 2.03243e+07 2.33488e+07 0.00216105 2.03954e+07 50.0873 0.00316256 0.997261 0 50.0593 GTEX-132QS-0126-SM-5IFH9 0 B1 2 pieces, excellent preservation; cortex AND medulla present up to ~2mm focus, valuable specimen, latter delineated, adherent fat delineated by interrupted line 8.2 Adrenal Gland Adrenal Gland 0002369 1534 1014 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.991763 248695 0.979873 0.994114 0.850766 21801 1 76 0.00238268 160 0 7.64744e+07 0.0198197 1.23726e+06 7.69271e+07 8.23345e+06 21812 3.80669e+07 0 0.129107 0.994114 0.845759 7.64744e+07 0.00370951 1.69393e+07 1.31685e+07 1.70327e+07 200 1.69897e+07 1.31281e+07 0.00304453 1.71501e+07 50.2348 0.0160836 0.996465 0 50.1376 GTEX-132QS-0226-SM-5IFFZ 1 B1 2 pieces, moderate congestion 6.3 Spleen Spleen 0002106 1535 1013 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988496 239113 0.965683 0.991482 0.801438 23205 1 76 0.00264621 159 0 7.2033e+07 0.0334563 448436 7.26519e+07 8.31082e+06 23230 3.57935e+07 0 0.164245 0.991482 0.794611 7.2033e+07 0.0040721 1.58008e+07 9.90065e+06 1.58938e+07 177 1.58919e+07 1.05972e+07 0.003357 1.60127e+07 50.1893 0.00617239 0.994468 0 50.1467 GTEX-132QS-0326-SM-5IJFN 1 B1 2 pieces small (~1.5mm) colloid cyst, delineated 7.2 Thyroid Thyroid 0002046 1536 1012 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987942 326789 0.966439 0.989599 0.770589 24336 1 76 0.00466782 275 0 1.06295e+08 0.0333026 381603 1.07412e+08 7.24158e+06 24376 5.28807e+07 0 0.19585 0.989599 0.762574 1.06295e+08 0.00470657 2.32298e+07 1.54791e+07 2.34172e+07 261 2.34241e+07 1.80573e+07 0.00468716 2.33935e+07 49.9674 0.0035527 0.991256 0 50.2009 GTEX-132QS-0426-SM-5KLZ6 1 B1 2 pieces, minimal fibrosis 8.2 Heart Heart - Left Ventricle 0006566 1543 1005 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988748 161908 0.983955 0.990568 0.851003 20842 1 76 0.00382032 271 0 9.97013e+07 0.0157781 1.87190e+06 1.00651e+08 4.46754e+06 20853 4.96469e+07 0 0.132952 0.990568 0.842976 9.97013e+07 0.00460929 2.182e+07 2.61325e+07 2.18703e+07 269 2.17482e+07 1.71554e+07 0.00421408 2.2112e+07 50.4148 0.018598 0.992387 0 50.0575 GTEX-132QS-0526-SM-5IJC7 1 B1 2 pieces, no abnormality 7.2 Heart Heart - Atrial Appendage 0006631 1544 1004 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990764 202204 0.982519 0.993696 0.853295 21217 1 76 0.00236601 266 0 8.70787e+07 0.0172618 1.49313e+06 8.76311e+07 1.24864e+07 21229 4.33267e+07 0 0.129224 0.993696 0.847915 8.70787e+07 0.00384484 1.87938e+07 1.64225e+07 1.85465e+07 274 1.84369e+07 1.361e+07 0.00310324 1.91374e+07 50.9321 0.0170388 0.996627 0 49.6689 GTEX-132QS-0626-SM-62LFM 1 B1 6 pieces, atherosis up to ~0.2mm 7.3 Blood Vessel Artery - Aorta 0001496 1547 1001 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988528 157530 0.977957 0.992154 0.861114 20773 1 76 0.00261375 170 0 7.9179e+07 0.0216911 235923 7.98051e+07 6.04087e+06 20787 3.93608e+07 0 0.116843 0.992154 0.854358 7.9179e+07 0.00328628 1.70262e+07 6.09946e+06 1.72065e+07 183 1.71955e+07 1.68922e+07 0.00294879 1.73015e+07 50.1536 0.00295624 0.99578 0 50.2633 GTEX-132QS-0726-SM-5IJE9 1 B1 2 pieces, mild congestion 8.3 Lung Lung 0008952 1558 990 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.989301 206038 0.979836 0.990823 0.834457 24235 1 76 0.00471097 275 0 1.12397e+08 0.0197604 428436 1.13438e+08 7.22822e+06 24260 5.59196e+07 0 0.145379 0.990823 0.826799 1.12397e+08 0.00479293 2.49479e+07 1.01189e+07 2.51723e+07 273 2.52014e+07 2.25791e+07 0.00475189 2.50869e+07 49.8861 0.00377684 0.992345 0 50.2239 GTEX-132QS-0826-SM-5K7WV 1 B1 2 pieces 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1560 988 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.985975 177053 0.978333 0.988173 0.869305 20926 1 76 0.00293582 168 0 7.41516e+07 0.0214027 575071 7.50391e+07 1.3071e+07 20935 3.69089e+07 0 0.109028 0.988173 0.859024 7.41516e+07 0.00410742 1.62238e+07 1.06138e+07 1.62863e+07 189 1.62447e+07 1.38953e+07 0.00352032 1.64251e+07 50.2761 0.00766362 0.990371 0 50.0961 GTEX-132QS-0926-SM-5P9GB 1 B1 2 pieces, Islets well visualized; rep. encircled, focal fat, delineated 7.4 Pancreas Pancreas 0001150 1563 985 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99303 277187 0.971208 0.993537 0.838256 22937 1 76 0.00293998 206 0 1.0935e+08 0.0285841 364230 1.10062e+08 3.71636e+06 22959 5.44751e+07 0 0.132952 0.993537 0.832839 1.0935e+08 0.00357445 2.46534e+07 1.94008e+07 2.5073e+07 208 2.49507e+07 2.81046e+07 0.00325705 2.484e+07 49.8888 0.00330932 0.994044 0 50.4219 GTEX-132QS-1126-SM-5P9GC 1 B1 2 pieces, glands well preserved; one aliquot is ~50% 'capsule' and fibrous tissue, glandular portion delineated 7.6 Prostate Prostate 0002367 1573 975 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992173 208655 0.972104 0.992424 0.797592 24722 1 76 0.00296261 272 0 1.00999e+08 0.0276415 543901 1.0177e+08 3.46764e+06 24759 5.03085e+07 0 0.174512 0.992424 0.791549 1.00999e+08 0.00348693 2.22047e+07 1.08956e+07 2.2422e+07 291 2.22841e+07 1.5923e+07 0.0032247 2.23706e+07 50.0968 0.00534443 0.992675 0 50.2435 GTEX-132QS-1226-SM-5P9GD 1 B1 2 pieces, spermatogenesis present 7.9 Testis Testis 0000473 1575 973 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990694 433462 0.9315 0.991178 0.73415 34399 1 76 0.0029468 290 0 1.15152e+08 0.0681621 732562 1.16177e+08 3.67866e+06 34480 5.73427e+07 0 0.197351 0.991178 0.727673 1.15152e+08 0.00348084 2.41319e+07 1.59785e+07 2.42064e+07 271 2.42042e+07 2.02343e+07 0.00321369 2.41865e+07 49.9816 0.00630555 0.991662 0 50.077 GTEX-132QS-1426-SM-5P9GE 1 B1 4 pieces, squamous mucosa up to ~ 0.3mm, ~10% thickness, good specimens 8.8 Esophagus Esophagus - Mucosa 0006920 1581 967 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992109 318179 0.979612 0.992704 0.851802 23471 1 76 0.00289594 280 0 1.17686e+08 0.0199944 582455 1.18551e+08 3.80617e+06 23483 5.86253e+07 0 0.12781 0.992704 0.845587 1.17686e+08 0.00349618 2.64563e+07 1.60408e+07 2.66898e+07 327 2.66009e+07 2.50235e+07 0.00319588 2.66139e+07 50.0122 0.00491313 0.9933 0 50.2197 GTEX-132QS-1526-SM-5J2MV 1 B1 4 pieces, muscularis, adherent fat/serosa up to ~1mm, rep. delineated, good specimens 6.5 Esophagus Esophagus - Muscularis 0004648 1585 963 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985588 189957 0.980647 0.989536 0.870553 21739 1 76 0.00421093 170 0 8.29471e+07 0.0190843 529172 8.38242e+07 4.38173e+06 21750 4.11854e+07 0 0.110093 0.989536 0.861444 8.29471e+07 0.00595348 1.79351e+07 7.67469e+06 1.81764e+07 181 1.81846e+07 1.6398e+07 0.00507873 1.823e+07 50.0623 0.00631288 0.993485 0 50.3342 GTEX-132QS-1626-SM-5K7YZ 1 B1 4 pieces, muscularis, good specimens 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1591 957 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991597 94890 0.980456 0.99377 0.870438 20735 1 76 0.00254357 147 0 6.74621e+07 0.0192147 487060 6.7885e+07 1.20502e+07 20744 3.35998e+07 0 0.110018 0.99377 0.865016 6.74621e+07 0.00359647 1.47021e+07 6.49771e+06 1.47182e+07 163 1.47002e+07 1.34562e+07 0.00306887 1.48577e+07 50.2664 0.00717478 0.995944 0 50.0274 GTEX-132QS-1826-SM-5IFFN 0 B1 6 pieces, superb preservation, mucosa up to ~1mm, 15-20% thickness 6.8 Stomach Stomach 0000945 1599 949 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986324 176600 0.977557 0.988925 0.831303 22609 1 76 0.00259414 255 0 7.68643e+07 0.0218075 1.36998e+06 7.77251e+07 8.73841e+06 22628 3.82319e+07 0 0.146254 0.988925 0.822097 7.68643e+07 0.00397505 1.73458e+07 4.96046e+07 1.76589e+07 203 1.76739e+07 1.61675e+07 0.00328278 1.75259e+07 49.7898 0.017626 0.991527 0 50.4473 GTEX-132QS-2426-SM-62LFI 0 B1 2 pieces, excellent clean specimens 7 Nerve Nerve - Tibial 0001323 1681 867 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988292 160603 0.974837 0.991802 0.805082 22828 1 76 0.00272178 175 0 7.88324e+07 0.0248714 218978 7.9484e+07 5.73176e+06 22853 3.91853e+07 0 0.169755 0.991802 0.798482 7.88324e+07 0.0033286 1.73949e+07 6.29178e+06 1.75015e+07 178 1.75101e+07 1.4645e+07 0.00302412 1.76449e+07 50.1917 0.00275499 0.995313 0 50.1527 GTEX-132QS-2526-SM-62LFJ 0 B1 2 pieces, minimal fascia/fibrous tissue, good specimens 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1683 865 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.98851 179850 0.980188 0.992267 0.866555 20963 1 76 0.00275688 174 0 7.58382e+07 0.0195501 406856 7.64291e+07 5.47335e+06 20976 3.76992e+07 0 0.113633 0.992267 0.859854 7.58382e+07 0.00355916 1.66148e+07 7.64686e+06 1.67432e+07 186 1.67404e+07 1.49551e+07 0.0031565 1.68839e+07 50.2135 0.00532331 0.996024 0 50.1926 GTEX-132QS-5001-SM-AN3Y5 B1 Heart Heart - Left Ventricle 0006566 1542 ChIP-Seq GTEX-132QS-5016-SM-AN3Y8 B1 Muscle Muscle - Skeletal 0011907 1671 ChIP-Seq GTEX-1339X-0004-SM-5HJQH B1 Blood Whole Blood 0013756 -72 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-1339X-0005-SM-5O9CQ B1 6.9 Blood Whole Blood 0013756 -72 BP-43227 RNA isolation_PAXgene Blood RNA (Manual) 09/06/2013 LCSET-4910,LCSET-5336 04/10/2014 TruSeq.v1 RNASEQ 0.980632 889334 0.968565 0.983019 0.837569 17475 1 76 0.00327351 156 0 1.08761e+08 0.030114 249213 1.10639e+08 4.56116e+06 17480 5.39936e+07 0 0.130995 0.983019 0.823347 1.08761e+08 0.00449474 2.46331e+07 1.0188e+08 2.4963e+07 190 2.49592e+07 2.71059e+07 0.00388264 2.49111e+07 49.9517 0.00225248 0.985407 0 50.3326 GTEX-1339X-0008-SM-5ZZUL B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 197 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994878 399191 0.969817 0.995907 0.841051 23059 1 76 0.00173407 184 0 7.95156e+07 0.029828 309669 7.98424e+07 6.97493e+06 23076 3.96537e+07 0 0.128766 0.995907 0.837609 7.95156e+07 0.0026545 1.74887e+07 1.61762e+07 1.76071e+07 177 1.75845e+07 1.96041e+07 0.00219381 1.75981e+07 50.0194 0.0038785 0.996936 0 50.1687 GTEX-1339X-0226-SM-DK2K3 1 B1 2 pieces; Hashimoto thyroiditis Thyroid Thyroid 0002046 99 841 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1339X-0226-SM-DLIOH 1 B1 2 pieces; Hashimoto thyroiditis Thyroid Thyroid 0002046 99 841 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1339X-0326-SM-5K7Z8 0 B1 2 pieces; 20 & 50% fibrofatty content 6.5 Heart Heart - Atrial Appendage 0006631 101 839 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991564 106647 0.979753 0.993844 0.838907 20300 1 76 0.00242507 149 0 6.83502e+07 0.020064 1.95011e+06 6.87735e+07 1.24613e+07 20313 3.40494e+07 0 0.140846 0.993844 0.833743 6.83502e+07 0.00352423 1.46031e+07 1.60695e+07 1.426e+07 201 1.41281e+07 9.13782e+06 0.00297339 1.48829e+07 51.3008 0.0283556 0.996125 0 49.4057 GTEX-1339X-0426-SM-5KLZY 0 B1 2 pieces 6.7 Heart Heart - Left Ventricle 0006566 104 836 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987604 189583 0.985653 0.989944 0.864871 20018 1 76 0.00355602 267 0 8.23415e+07 0.0141044 2.11360e+06 8.3178e+07 3.84269e+06 20025 4.09781e+07 0 0.120782 0.989944 0.856174 8.23415e+07 0.00450941 1.79896e+07 2.19268e+07 1.81178e+07 259 1.7982e+07 1.29883e+07 0.00403159 1.82846e+07 50.4172 0.0254106 0.992283 0 50.1775 GTEX-1339X-0526-SM-5KLYW 1 B1 6 pieces; well dissected; no plaques 7.6 Blood Vessel Artery - Aorta 0001496 114 826 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987344 152134 0.975471 0.989902 0.849383 21571 1 76 0.0036845 168 0 8.15929e+07 0.0242248 233584 8.24252e+07 3.74378e+06 21587 4.05634e+07 0 0.126088 0.989902 0.840806 8.15929e+07 0.00500399 1.76329e+07 5.81226e+06 1.78751e+07 186 1.78415e+07 1.60114e+07 0.00434254 1.7868e+07 50.0372 0.00283389 0.992461 0 50.341 GTEX-1339X-0626-SM-5IJER 1 B1 2 pieces; small patchy foci of bronchopneumonia 6.6 Lung Lung 0008952 117 823 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98455 216703 0.97139 0.986495 0.750812 24103 1 76 0.00477315 152 0 8.34882e+07 0.028374 742801 8.46312e+07 5.5118e+06 24141 4.14692e+07 0 0.220578 0.986495 0.740672 8.34882e+07 0.00529409 1.83672e+07 8.33608e+06 1.85877e+07 173 1.85518e+07 1.20126e+07 0.00503311 1.85623e+07 50.0141 0.00877692 0.988441 0 50.2983 GTEX-1339X-0726-SM-5L3FF 0 B1 2 pieces; 1 piece has 20% fibrous content 9.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 120 820 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988594 230172 0.980013 0.992512 0.870917 20836 1 76 0.00290252 142 0 6.29153e+07 0.0197318 537112 6.33899e+07 6.90011e+06 20845 3.12748e+07 0 0.109096 0.992512 0.864396 6.29153e+07 0.00377306 1.39502e+07 7.62879e+06 1.40055e+07 149 1.40225e+07 1.28622e+07 0.00333607 1.41585e+07 50.2414 0.00847314 0.99643 0 50.0989 GTEX-1339X-0826-SM-5J2O6 0 B1 2 pieces; 50 & 30% external fat 7.9 Adrenal Gland Adrenal Gland 0002369 123 817 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984527 218891 0.977299 0.988516 0.834701 22528 1 76 0.0041943 202 0 8.32518e+07 0.0224743 1.83311e+06 8.4219e+07 4.52374e+06 22544 4.13352e+07 0 0.142598 0.988516 0.825115 8.32518e+07 0.00590382 1.83373e+07 1.18976e+07 1.85426e+07 212 1.8544e+07 1.22465e+07 0.00504561 1.86399e+07 50.1289 0.021766 0.992506 0 50.2783 GTEX-1339X-1026-SM-5IFH5 1 B1 2 pieces; islets greatly reduced in number 6.8 Pancreas Pancreas 0001150 127 813 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988096 378118 0.969541 0.992083 0.829722 21297 1 76 0.00226753 128 0 7.2638e+07 0.0302953 292658 7.32177e+07 8.65029e+06 21311 3.60967e+07 0 0.139819 0.992083 0.823154 7.2638e+07 0.00374331 1.64372e+07 1.74029e+07 1.64945e+07 135 1.65922e+07 1.80429e+07 0.00300245 1.66336e+07 50.0622 0.0039971 0.99607 0 50.087 GTEX-1339X-1126-SM-5J2OI 0 B1 6 pieces; well dissected; one has 20% fibrous submucosa 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 136 804 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984676 143741 0.975143 0.988679 0.829885 22620 1 76 0.00420697 162 0 7.61527e+07 0.0246394 720248 7.70248e+07 4.22405e+06 22637 3.78228e+07 0 0.145258 0.988679 0.82049 7.61527e+07 0.00585798 1.66164e+07 7.1519e+06 1.67659e+07 170 1.67812e+07 1.26686e+07 0.00502913 1.68803e+07 50.1472 0.00935086 0.992681 0 50.2239 GTEX-1339X-1226-SM-5PNVO 1 B1 6 pieces; z3 have 2 mm of muscularis propria 7.8 Esophagus Esophagus - Mucosa 0006920 138 802 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 EXCLUDE 0.992355 197956 0.976232 0.994152 0.841508 22233 1 76 0.00181244 207 0 7.51373e+07 0.0235251 577576 7.55793e+07 7.34812e+06 22249 3.74275e+07 0 0.134724 0.994152 0.836586 7.51373e+07 0.00270698 1.64089e+07 6.66889e+06 1.65542e+07 206 1.65176e+07 1.35193e+07 0.0022589 1.65733e+07 50.0841 0.00764199 0.995948 0 50.2204 GTEX-1339X-1426-SM-5K7YO 1 B1 6 pieces; no mucosa, only muscle 7.6 Stomach Stomach 0000945 151 789 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99017 91697 0.978335 0.992732 0.85948 20634 1 76 0.00247171 134 0 5.63308e+07 0.0214344 344231 5.67432e+07 1.08487e+07 20644 2.80393e+07 0 0.118855 0.992732 0.853234 5.63308e+07 0.00371707 1.24187e+07 5.06956e+06 1.25033e+07 142 1.24876e+07 1.0384e+07 0.00309278 1.25725e+07 50.1693 0.00606647 0.995294 0 50.1699 GTEX-1339X-1626-SM-5IJDN 1 B1 6 pieces; all devoid of mucosa; muscularis, submucosa, and subserosa present 8 Colon Colon - Transverse 0001157 156 784 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990583 159584 0.97617 0.993031 0.831108 22350 1 76 0.00206709 161 0 6.90791e+07 0.0236087 490589 6.95639e+07 8.99584e+06 22367 3.43784e+07 0 0.145062 0.993031 0.825316 6.90791e+07 0.003652 1.52475e+07 6.67432e+06 1.53233e+07 166 1.52694e+07 1.26311e+07 0.00285759 1.54667e+07 50.3211 0.00705235 0.995478 0 50.124 GTEX-1339X-1726-SM-5P9J9 1 B1 6 pieces; complete muscularis but with up to 1.6 mm thick fibrous submucosa 7.1 Colon Colon - Sigmoid 0001159 161 779 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992085 148930 0.976813 0.992763 0.845877 21483 1 76 0.0030095 166 0 6.98379e+07 0.0229764 594103 7.0347e+07 2.24633e+06 21496 3.47951e+07 0 0.130936 0.992763 0.839755 6.98379e+07 0.00333833 1.53231e+07 6.36551e+06 1.54568e+07 173 1.53688e+07 1.23208e+07 0.0031738 1.54576e+07 50.1442 0.00844532 0.993442 0 50.2172 GTEX-1339X-1926-SM-5PNVP 1 B1 2 pieces; spermatogenesis 6.6 Testis Testis 0000473 174 766 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991652 229563 0.943661 0.993135 0.774432 31764 1 76 0.00195801 167 0 7.76702e+07 0.0560654 901874 7.82071e+07 7.69402e+06 31813 3.87017e+07 0 0.169229 0.993135 0.769116 7.76702e+07 0.00288074 1.632e+07 1.04099e+07 1.64723e+07 191 1.64547e+07 1.23276e+07 0.00241869 1.64381e+07 49.9747 0.0115319 0.994618 0 50.2321 GTEX-1339X-2326-SM-5HL5B 0 B1 1 piece; well dissected, no fat 8.1 Salivary Gland Minor Salivary Gland 0006330 197 743 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99066 263291 0.971337 0.992629 0.787589 23601 1 76 0.00217495 147 0 7.12452e+07 0.0278256 290200 7.17742e+07 7.47877e+06 23620 3.54488e+07 0 0.183749 0.992629 0.781784 7.12452e+07 0.00301633 1.58522e+07 9.99169e+06 1.59602e+07 161 1.59697e+07 1.29528e+07 0.0025948 1.5978e+07 50.013 0.00404323 0.994599 0 50.1698 GTEX-1339X-2426-SM-5KLYU 1 B1 2 pieces; 1% internal fat 8.1 Muscle Muscle - Skeletal 0011907 199 741 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985076 166241 0.983236 0.987286 0.872005 19500 1 76 0.00355088 282 0 1.02981e+08 0.0165886 1.2327e+06 1.04307e+08 4.53664e+06 19507 5.1263e+07 0 0.111231 0.987286 0.860918 1.02981e+08 0.00451055 2.2386e+07 1.99903e+07 2.25774e+07 307 2.24445e+07 1.81203e+07 0.00402964 2.27156e+07 50.3002 0.011818 0.989496 0 50.2128 GTEX-1339X-2626-SM-5K7YX 1 B1 2 pieces; moderate to severe medial calcification; well dissected 7.1 Blood Vessel Artery - Tibial 0007610 202 738 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989474 137175 0.977278 0.992274 0.877321 20365 1 76 0.00247655 165 0 7.28994e+07 0.0223927 222085 7.3467e+07 1.37346e+07 20372 3.62521e+07 0 0.099957 0.992274 0.870543 7.28994e+07 0.00384479 1.57385e+07 6.4123e+06 1.58996e+07 178 1.58547e+07 1.53413e+07 0.00315874 1.59889e+07 50.2108 0.00302292 0.995073 0 50.2546 GTEX-1339X-2726-SM-5PNYU 0 B1 2 pieces; well dissected 7.2 Nerve Nerve - Tibial 0001323 204 736 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991304 361856 0.97728 0.992122 0.838492 24294 1 76 0.00302592 385 0 1.62886e+08 0.0224336 563744 1.6418e+08 4.80133e+06 24329 8.11041e+07 0 0.138788 0.992122 0.831887 1.62886e+08 0.00356811 3.56933e+07 1.73259e+07 3.60235e+07 393 3.57494e+07 3.49554e+07 0.00329679 3.61112e+07 50.2518 0.0034337 0.992941 0 50.2303 GTEX-133LE-0001-SM-5ANGK C1 Blood Whole Blood 0013756 199 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-133LE-0001-SM-5DWRY C1 Blood Whole Blood 0013756 199 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-133LE-0001-SM-7DRPC C1 Blood Whole Blood 0013756 199 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-133LE-0008-SM-62LDD C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 302 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988627 603659 0.971099 0.992623 0.849399 21123 1 76 0.00244693 227 0 9.14187e+07 0.0285211 389324 9.20982e+07 6.93154e+06 21145 4.54392e+07 0 0.1217 0.992623 0.843133 9.14187e+07 0.00298002 2.00797e+07 1.731e+07 2.01963e+07 221 2.02815e+07 2.23125e+07 0.0027124 2.03446e+07 50.0777 0.00422727 0.996618 0 50.1447 GTEX-133LE-0226-SM-5PNY3 1 C1 6 pieces; no plaques; well dissected 6.6 Blood Vessel Artery - Aorta 0001496 152 1411 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992829 228867 0.976208 0.993459 0.832722 23101 1 76 0.00299957 277 0 1.00659e+08 0.0234305 406624 1.01321e+08 3.00397e+06 23127 5.0143e+07 0 0.143487 0.993459 0.827275 1.00659e+08 0.00349227 2.17661e+07 7.91752e+06 2.19324e+07 277 2.18199e+07 1.90452e+07 0.00324576 2.19436e+07 50.1414 0.00401321 0.994089 0 50.1902 GTEX-133LE-0326-SM-5P9G4 1 C1 2 pieces; well dissected 6.8 Thyroid Thyroid 0002046 156 1408 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992485 304831 0.969904 0.992554 0.762438 26209 1 76 0.00300182 376 0 1.40798e+08 0.0298467 735386 1.41854e+08 4.67646e+06 26262 7.00972e+07 0 0.207465 0.992554 0.756761 1.40798e+08 0.00358813 3.06969e+07 1.76817e+07 3.11258e+07 357 3.09551e+07 2.13934e+07 0.00329496 3.08744e+07 49.9347 0.0051841 0.992624 0 50.3469 GTEX-133LE-0526-SM-5N9EJ 1 C1 2 pieces; bronchopneumonia 30% 5.7 Lung Lung 0008952 161 1404 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988548 305563 0.973236 0.990057 0.802533 24726 1 76 0.004096 273 0 9.68584e+07 0.0264266 463857 9.78312e+07 4.70865e+06 24757 4.81662e+07 0 0.170702 0.990057 0.794553 9.68584e+07 0.00406241 2.13839e+07 9.02564e+06 2.1566e+07 264 2.15073e+07 1.64406e+07 0.00407923 2.1582e+07 50.0866 0.0047414 0.991565 0 50.212 GTEX-133LE-0626-SM-5IFFJ 1 C1 6 pieces; well dissected 7.3 Esophagus Esophagus - Mucosa 0006920 162 1404 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987466 311507 0.975041 0.991159 0.830495 22978 1 76 0.00218136 150 0 7.11442e+07 0.0245881 239397 7.17789e+07 7.50755e+06 23001 3.53179e+07 0 0.144546 0.991159 0.823152 7.11442e+07 0.00392373 1.59111e+07 8.67218e+06 1.59375e+07 158 1.60112e+07 1.47381e+07 0.0030493 1.60969e+07 50.1335 0.0033352 0.994851 0 50.0415 GTEX-133LE-0726-SM-5P9IZ 1 C1 6 pieces; well dissected 6.8 Esophagus Esophagus - Muscularis 0004648 164 1403 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992898 191512 0.97658 0.993612 0.848112 22572 1 76 0.00310947 280 0 9.41491e+07 0.0231604 864957 9.47544e+07 2.98129e+06 22589 4.69119e+07 0 0.128468 0.993612 0.842693 9.41491e+07 0.00346859 2.03174e+07 8.07122e+06 2.04702e+07 278 2.03569e+07 1.71707e+07 0.0032889 2.04952e+07 50.1693 0.0091284 0.994325 0 50.1874 GTEX-133LE-0926-SM-5P9J1 0 C1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 168 1399 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992594 268726 0.980213 0.993126 0.838074 22638 1 76 0.0030907 276 0 9.47434e+07 0.0195526 542359 9.53991e+07 3.00276e+06 22658 4.72176e+07 0 0.14214 0.993126 0.832313 9.47434e+07 0.00338209 2.09653e+07 7.8239e+06 2.11292e+07 275 2.10292e+07 1.77794e+07 0.00323631 2.1117e+07 50.1041 0.00568516 0.993659 0 50.1947 GTEX-133LE-1226-SM-5IFGC 0 C1 2 pieces; corpora albicans & rare ova 7.6 Ovary Ovary 0000992 174 1395 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990678 937296 0.934153 0.993149 0.713991 23584 1 76 0.00222929 134 0 7.01532e+07 0.06558 183818 7.06372e+07 7.75311e+06 23619 3.49133e+07 0 0.220162 0.993149 0.709099 7.01532e+07 0.00347577 1.48473e+07 3.36419e+07 1.50237e+07 143 1.50536e+07 1.13075e+07 0.00285097 1.50026e+07 49.9152 0.00260228 0.99562 0 50.2954 GTEX-133LE-1326-SM-5IFGO 1 C1 6 pieces; full thickness; well dissected 7.7 Stomach Stomach 0000945 175 1395 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988801 180024 0.977888 0.991339 0.820349 23136 1 76 0.00219969 248 0 7.47144e+07 0.0215678 321938 7.53672e+07 8.3878e+06 23163 3.7172e+07 0 0.157539 0.991339 0.813243 7.47144e+07 0.00348753 1.69495e+07 4.6695e+07 1.70885e+07 192 1.71052e+07 1.72744e+07 0.00284196 1.71158e+07 50.0155 0.00427159 0.993876 0 50.2043 GTEX-133LE-1426-SM-5IFH1 1 C1 5 pieces; several lymphoid nodules in 3 pieces; well dissected 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 178 1393 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989494 212731 0.969737 0.991996 0.776209 24415 1 76 0.00262554 205 0 8.2264e+07 0.0297994 1.03469e+06 8.29277e+07 8.82065e+06 24455 4.09265e+07 0 0.193529 0.991996 0.769996 8.2264e+07 0.00402909 1.81865e+07 1.17608e+07 1.82962e+07 204 1.82519e+07 1.12837e+07 0.00332554 1.84213e+07 50.231 0.012477 0.994499 0 50.1503 GTEX-133LE-1526-SM-5IFEN 1 C1 6 pieces; full thickness; well preserved; well dissected 7.1 Colon Colon - Transverse 0001157 180 1391 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987036 335952 0.968985 0.990515 0.783077 23534 1 76 0.00290514 165 0 7.3899e+07 0.0287806 1.16391e+06 7.46066e+07 8.22213e+06 23565 3.6626e+07 0 0.185908 0.990515 0.775649 7.3899e+07 0.00472256 1.63153e+07 1.10847e+07 1.6343e+07 182 1.63418e+07 9.86392e+06 0.00381066 1.65588e+07 50.3297 0.0156007 0.993994 0 50.0423 GTEX-133LE-1726-SM-5K7VQ 0 C1 2 pieces; 1 with ducts & lobules; 1 with >90% fat 6.3 Breast Breast - Mammary Tissue 0008367 185 1388 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986679 161844 0.972924 0.989009 0.80266 24133 1 76 0.00448071 162 0 7.93533e+07 0.0266265 373583 8.02351e+07 5.49692e+06 24157 3.94521e+07 0 0.170263 0.989009 0.793839 7.93533e+07 0.00493564 1.74155e+07 7.97224e+06 1.75657e+07 165 1.75839e+07 1.43703e+07 0.00470764 1.75772e+07 49.9905 0.0046561 0.99134 0 50.2147 GTEX-133LE-1826-SM-5J1MV 0 C1 6 pieces; 20% intradermal fat; well dissected 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 301 1272 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988828 213454 0.973328 0.990634 0.792817 23717 1 76 0.00402376 299 0 9.90167e+07 0.0264516 672551 9.99529e+07 5.04565e+06 23756 4.92646e+07 0 0.180512 0.990634 0.785392 9.90167e+07 0.00467643 2.15563e+07 9.96396e+06 2.16731e+07 260 2.16652e+07 1.63783e+07 0.0043495 2.17331e+07 50.0783 0.00672868 0.992441 0 50.1351 GTEX-133LE-1926-SM-5N9FV 0 C1 2 pieces; 20% fibrous content in 1, 5% in other 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 303 1272 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989648 293617 0.978184 0.991164 0.812955 23055 1 76 0.00395035 277 0 9.8229e+07 0.0215258 565027 9.91047e+07 4.92613e+06 23082 4.88615e+07 0 0.16523 0.991164 0.805771 9.8229e+07 0.00393544 2.17113e+07 9.41233e+06 2.18289e+07 276 2.18097e+07 1.67147e+07 0.00394291 2.18727e+07 50.072 0.00570132 0.99268 0 50.1351 GTEX-133LE-2026-SM-5K7WM 0 C1 2 pieces; 5% internal fat in 1 piece 8.4 Muscle Muscle - Skeletal 0011907 308 1267 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99238 159286 0.982618 0.994695 0.865477 19295 1 76 0.00254705 157 0 6.88664e+07 0.0171888 722118 6.92337e+07 1.2295e+07 19306 3.43005e+07 0 0.117141 0.994695 0.860886 6.88664e+07 0.00376752 1.5122e+07 8.96842e+06 1.50734e+07 165 1.50744e+07 1.33006e+07 0.00315586 1.52661e+07 50.316 0.0104302 0.99701 0 49.9195 GTEX-133LE-2126-SM-5IJBX 1 C1 2 pieces; 5% internal fat in 1 piece 7.3 Nerve Nerve - Tibial 0001323 314 1261 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988402 187496 0.967953 0.991746 0.746683 23922 1 76 0.00228495 155 0 7.26516e+07 0.0317567 173633 7.32562e+07 1.01007e+07 23957 3.61056e+07 0 0.22127 0.991746 0.740521 7.26516e+07 0.00410182 1.59169e+07 6.67258e+06 1.60322e+07 157 1.60593e+07 1.17159e+07 0.00319032 1.61227e+07 50.0985 0.00237021 0.995091 0 50.1804 GTEX-133LE-2226-SM-5IFGU 1 C1 2 pieces; no lesions; well dissected 7.3 Blood Vessel Artery - Tibial 0007610 316 1260 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989368 236272 0.975447 0.992558 0.855045 20463 1 76 0.00213248 140 0 6.67825e+07 0.0241639 322100 6.72832e+07 7.89293e+06 20471 3.31994e+07 0 0.120403 0.992558 0.848682 6.67825e+07 0.00358264 1.41091e+07 5.29941e+06 1.4241e+07 150 1.42287e+07 1.43233e+07 0.00285523 1.43266e+07 50.1714 0.00478723 0.995749 0 50.2327 GTEX-133LE-2326-SM-5K7W3 0 C1 6 pieces; 10% intradermal fat; well dissected 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 318 1259 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987185 148417 0.974364 0.989327 0.80984 23278 1 76 0.00435264 189 0 8.50213e+07 0.0253911 479687 8.59386e+07 5.49518e+06 23304 4.22921e+07 0 0.164524 0.989327 0.801196 8.50213e+07 0.0047561 1.87105e+07 8.84343e+06 1.88211e+07 191 1.88285e+07 1.50668e+07 0.00455393 1.88819e+07 50.0709 0.00558174 0.991468 0 50.1473 GTEX-1399Q-0004-SM-5ANGQ C1 Blood Whole Blood 0013756 348 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 LCSET-4718 02/04/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1399Q-0004-SM-5DWRI C1 Blood Whole Blood 0013756 348 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 GTEx_OM25_Dec_01 01/28/2014 Illumina OMNI SNP Array OMNI GTEX-1399Q-0004-SM-7DRP9 C1 Blood Whole Blood 0013756 348 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1399Q-0005-SM-5NQAG C1 8 Blood Whole Blood 0013756 348 BP-43227 RNA isolation_PAXgene Blood RNA (Manual) 09/06/2013 LCSET-4907 03/21/2014 TruSeq.v1 EXCLUDE 0.985765 559034 0.965137 0.98905 0.800764 21551 1 76 0.0029316 145 0 8.46069e+07 0.0326753 114652 8.55437e+07 1.27448e+07 21568 4.19803e+07 0 0.164374 0.98905 0.791995 8.46069e+07 0.00587348 1.89883e+07 5.23538e+07 1.92161e+07 161 1.92909e+07 1.87256e+07 0.00439766 1.92027e+07 49.8854 0.00134027 0.992334 0 50.2982 GTEX-1399Q-0008-SM-62LDE C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 495 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990636 521683 0.979706 0.993831 0.879287 20256 1 76 0.00236673 290 0 1.06548e+08 0.0199509 257861 1.07209e+08 7.35422e+06 20270 5.30127e+07 0 0.100418 0.993831 0.873863 1.06548e+08 0.00278021 2.39668e+07 1.54523e+07 2.41022e+07 269 2.41929e+07 2.89736e+07 0.00257281 2.41961e+07 50.0033 0.00240521 0.997026 0 50.1408 GTEX-1399Q-1126-SM-5P9JA 1 C1 6 pieces; congestion and few lymphocytic aggregates 6.1 Esophagus Esophagus - Mucosa 0006920 511 906 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991281 216342 0.971243 0.991753 0.816295 21951 1 76 0.00330841 199 0 8.09668e+07 0.0285467 833806 8.16401e+07 2.69190e+06 21968 4.03423e+07 0 0.154948 0.991753 0.809563 8.09668e+07 0.00365799 1.80374e+07 1.15648e+07 1.82544e+07 209 1.81568e+07 1.25067e+07 0.00348312 1.81795e+07 50.0313 0.0102132 0.992226 0 50.2989 GTEX-1399Q-2326-SM-5KM2X 1 C1 6 pieces; hair bearing skin with up to 50% external fat 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 547 874 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987027 254327 0.9731 0.989048 0.813605 22546 1 76 0.0032051 162 0 7.56536e+07 0.0267157 451970 7.64914e+07 4.62157e+06 22573 3.76263e+07 0 0.159496 0.989048 0.804694 7.56536e+07 0.00435212 1.65662e+07 1.06582e+07 1.67451e+07 174 1.67144e+07 1.32943e+07 0.00377744 1.67539e+07 50.059 0.00590877 0.991068 0 50.2686 GTEX-1399Q-2426-SM-5J2MO 1 C1 2 pieces 6.6 Muscle Muscle - Skeletal 0011907 549 872 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.980857 269586 0.975657 0.985533 0.842712 22102 1 76 0.0043596 278 0 9.77434e+07 0.0241639 2.88257e+06 9.91783e+07 5.77849e+06 22117 4.84624e+07 0 0.132945 0.985533 0.83052 9.77434e+07 0.00645597 2.13478e+07 1.02748e+07 2.164e+07 267 2.16381e+07 1.35399e+07 0.00540281 2.1754e+07 50.1335 0.0290646 0.990208 0 50.3399 GTEX-1399Q-2826-SM-5IJEZ 1 C1 2 pieces; spermatogenesis present, congestion 5.8 Testis Testis 0000473 566 856 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.9861 255014 0.943559 0.987772 0.746238 32161 1 76 0.00483393 167 0 8.87847e+07 0.0561618 1.17533e+06 8.98837e+07 5.82539e+06 32219 4.41514e+07 0 0.197321 0.987772 0.737114 8.87847e+07 0.00495883 1.8916e+07 1.17203e+07 1.90689e+07 180 1.91114e+07 1.38119e+07 0.00489628 1.90119e+07 49.8695 0.0130761 0.989444 0 50.2012 GTEX-1399R-0002-SM-62LD9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -43 BP-45438 RNA isolation_Trizol Manual (Cell Pellet) 11/04/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989258 779504 0.968347 0.992294 0.806585 22125 1 76 0.00295204 282 0 1.04795e+08 0.0307858 947983 1.05609e+08 7.08578e+06 22160 5.21037e+07 0 0.161762 0.992294 0.80037 1.04795e+08 0.00327341 2.32782e+07 1.47176e+07 2.33738e+07 261 2.34393e+07 2.37984e+07 0.00311223 2.35101e+07 50.0754 0.00897638 0.995331 0 50.1025 GTEX-1399R-0003-SM-5HJRL_1 B1 Blood Whole Blood 0013756 -43 BP-43369 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-1399R-0006-SM-5N9FR B1 8.8 Blood Whole Blood 0013756 -43 BP-43309 RNA isolation_PAXgene Blood RNA (Manual) 09/09/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984278 2.48584e+06 0.914605 0.986038 0.746812 21193 1 76 0.0050278 135 0 8.5026e+07 0.0837554 532410 8.623e+07 4.22397e+06 21215 4.21497e+07 0 0.167793 0.986038 0.736385 8.5026e+07 0.00524107 1.78079e+07 6.6556e+07 1.78429e+07 152 1.78529e+07 1.50962e+07 0.00513424 1.80218e+07 50.2354 0.0061743 0.987798 0 50.049 GTEX-1399R-0008-SM-5ZZUF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 334 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994993 424702 0.979987 0.996103 0.871253 22249 1 76 0.00173083 187 0 8.06235e+07 0.0196509 284941 8.09389e+07 7.30766e+06 22259 4.02006e+07 0 0.108734 0.996103 0.867858 8.06235e+07 0.00268874 1.82188e+07 1.0967e+07 1.82517e+07 178 1.82495e+07 2.17079e+07 0.00220925 1.83125e+07 50.0862 0.00352045 0.997213 0 50.045 GTEX-1399R-0126-SM-5IFEV 1 B1 2 pieces 6.7 Thyroid Thyroid 0002046 81 1126 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986938 251706 0.967569 0.990085 0.797291 24573 1 76 0.00219098 169 0 8.2726e+07 0.0321395 902814 8.35545e+07 9.2783e+06 24606 4.11247e+07 0 0.170278 0.990085 0.789386 8.2726e+07 0.00380361 1.80899e+07 7.74417e+06 1.82224e+07 196 1.82301e+07 1.42615e+07 0.00299473 1.83323e+07 50.1398 0.0108051 0.993232 0 50.1825 GTEX-1399R-0226-SM-5IJGG 1 B1 2 pieces; moderate congestion 7.3 Spleen Spleen 0002106 84 1123 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.982201 239010 0.962151 0.984113 0.775099 25140 1 76 0.0060631 202 0 9.56233e+07 0.0331427 617930 9.71670e+07 6.52455e+06 25175 4.72902e+07 0 0.187052 0.984113 0.762785 9.56233e+07 0.00634898 2.10771e+07 2.10654e+07 2.13025e+07 207 2.13607e+07 1.36836e+07 0.00620576 2.11982e+07 49.8092 0.00635946 0.986024 0 50.2659 GTEX-1399R-0326-SM-5KM1X 1 B1 3 pieces plus fragments; 10% external fat 8.8 Adrenal Gland Adrenal Gland 0002369 88 1119 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988401 211930 0.973579 0.990724 0.809283 22805 1 76 0.00378889 202 0 8.38664e+07 0.0260556 1.65878e+06 8.46517e+07 3.86942e+06 22831 4.17241e+07 0 0.164296 0.990724 0.801777 8.38664e+07 0.00469046 1.84118e+07 1.13605e+07 1.84317e+07 222 1.85085e+07 1.37414e+07 0.00423862 1.85133e+07 50.0064 0.0195953 0.993048 0 50.0271 GTEX-1399R-0426-SM-5IJE3 1 B1 2 pieces; 30% interstitial fibrosis and exocrine atrophy; 20 and 30% internal and external fat 6.8 Pancreas Pancreas 0001150 90 1117 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.988583 209816 0.980899 0.990426 0.849144 23528 1 76 0.00480685 127 0 1.09146e+08 0.0185701 393638 1.10201e+08 6.89177e+06 23556 5.42864e+07 0 0.131755 0.990426 0.841015 1.09146e+08 0.00512419 2.50628e+07 2.96677e+07 2.55227e+07 152 2.54114e+07 3.2633e+07 0.00496523 2.5377e+07 49.9661 0.00357199 0.99227 0 50.4546 GTEX-1399R-0526-SM-5IJEF 1 B1 2 pieces; seminal vesical occupies 25% of 1 piece 7.9 Prostate Prostate 0002367 91 1116 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986542 229505 0.963434 0.988373 0.745672 25849 1 76 0.00488713 140 0 8.13929e+07 0.0361475 446694 8.23504e+07 5.135e+06 25889 4.04407e+07 0 0.217761 0.988373 0.737003 8.13929e+07 0.00521061 1.77417e+07 7.84485e+06 1.78497e+07 161 1.7887e+07 1.21153e+07 0.00504857 1.78474e+07 49.9447 0.00542431 0.990205 0 50.1517 GTEX-1399R-0626-SM-5K7UZ 1 B1 6 pieces; no plaques; well dissected 7.2 Blood Vessel Artery - Aorta 0001496 95 1112 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986512 227474 0.974348 0.988965 0.846192 22294 1 76 0.00428464 170 0 8.52921e+07 0.0253138 501785 8.62438e+07 5.54896e+06 22308 4.2392e+07 0 0.128156 0.988965 0.836854 8.52921e+07 0.00497098 1.83112e+07 6.27983e+06 1.85764e+07 197 1.85336e+07 1.55306e+07 0.00462696 1.85568e+07 50.0314 0.00581822 0.991418 0 50.3595 GTEX-1399R-0726-SM-5KM2A 1 B1 7 pieces; well dissected 8.4 Esophagus Esophagus - Muscularis 0004648 101 1106 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988634 141569 0.975491 0.990901 0.832021 22639 1 76 0.00372606 166 0 7.92151e+07 0.0242193 933429 7.99426e+07 3.68713e+06 22658 3.94039e+07 0 0.14347 0.990901 0.82445 7.92151e+07 0.00472211 1.69139e+07 7.19444e+06 1.70852e+07 191 1.70677e+07 1.35749e+07 0.00422294 1.70976e+07 50.0438 0.0116762 0.993167 0 50.2518 GTEX-1399R-0826-SM-5IJEL 0 B1 7 pieces; well dissected 9 Esophagus Esophagus - Mucosa 0006920 103 1104 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98797 174715 0.979129 0.989587 0.841292 23413 1 76 0.00477062 287 0 1.03863e+08 0.020379 809014 1.04956e+08 6.96162e+06 23433 5.16883e+07 0 0.137837 0.989587 0.832532 1.03863e+08 0.00480857 2.33038e+07 1.70065e+07 2.3402e+07 267 2.34265e+07 2.12477e+07 0.00478956 2.34451e+07 50.0199 0.00770815 0.991203 0 50.1051 GTEX-1399R-0926-SM-5J2N8 1 B1 6 pieces 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 111 1096 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985357 184496 0.97765 0.989237 0.844499 22468 1 76 0.00425949 163 0 7.70066e+07 0.0220511 969119 7.78444e+07 4.30253e+06 22488 3.82376e+07 0 0.13315 0.989237 0.83541 7.70066e+07 0.00595832 1.66062e+07 6.93687e+06 1.67262e+07 167 1.67436e+07 1.35116e+07 0.00510557 1.68573e+07 50.1692 0.0124494 0.993117 0 50.1801 GTEX-1399R-1126-SM-5IFIO 1 B1 7 pieces; focal erosions; mucosa only, no muscularis 6.1 Stomach Stomach 0000945 121 1086 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.982552 135864 0.981439 0.98412 0.849999 22027 1 76 0.00282745 348 0 8.11232e+07 0.018113 809955 8.24323e+07 6.11337e+06 22040 4.04086e+07 0 0.13144 0.98412 0.8365 8.11232e+07 0.00352225 1.87619e+07 1.0706e+08 1.91385e+07 250 1.91515e+07 2.27469e+07 0.0031743 1.88764e+07 49.6382 0.0098257 0.985687 0 50.4969 GTEX-1399R-1226-SM-5P9GF 1 B1 2 pieces; 50% macrosteatosis 8.6 Liver Liver 0001114 122 440 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.993338 450483 0.979438 0.993673 0.863584 22873 1 76 0.00277534 272 0 1.40147e+08 0.0201115 1.21483e+06 1.41039e+08 4.18007e+06 22896 6.98371e+07 0 0.115854 0.993673 0.858119 1.40147e+08 0.00321249 3.00617e+07 2.41702e+07 3.01443e+07 321 3.01079e+07 3.35209e+07 0.00299384 3.01478e+07 50.0331 0.00861347 0.994007 0 50.0687 GTEX-1399R-1326-SM-5PNYS 1 B1 6 pieces; no intradermal fat; well dissected 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 128 1079 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.986648 191096 0.971773 0.987463 0.825253 26046 1 76 0.00320252 379 0 1.22034e+08 0.0280229 2.08689e+06 1.23583e+08 3.8829e+06 26077 6.07348e+07 0 0.146519 0.987463 0.814907 1.22034e+08 0.00369875 2.67173e+07 1.31686e+07 2.72928e+07 355 2.70074e+07 1.75143e+07 0.00345043 2.70962e+07 50.082 0.0168865 0.988279 0 50.5328 GTEX-1399R-1626-SM-5P9GG 1 B1 2 pieces; 70% tubules are fibrotic; Leydig cell hyperplasia; reduced spermatogenesis 7.2 Testis Testis 0000473 135 1072 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990752 369427 0.945184 0.991127 0.755943 34940 1 76 0.00299283 384 0 1.36789e+08 0.0544444 1.39729e+06 1.38014e+08 4.72486e+06 35029 6.80994e+07 0 0.189241 0.991127 0.749236 1.36789e+08 0.00356426 2.91993e+07 1.59769e+07 2.94256e+07 338 2.93829e+07 2.36618e+07 0.00327844 2.92941e+07 49.9243 0.0101243 0.991503 0 50.193 GTEX-1399R-1726-SM-5K7YJ 1 B1 2 pieces; 25% external fat in 1 piece 6.2 Heart Heart - Atrial Appendage 0006631 139 1068 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990035 111050 0.981221 0.992704 0.857642 20775 1 76 0.00264118 143 0 6.16629e+07 0.0185527 2.6442e+06 6.2116e+07 1.10787e+07 20787 3.06982e+07 0 0.123578 0.992704 0.851385 6.16629e+07 0.00394695 1.35792e+07 1.1143e+07 1.34291e+07 169 1.33352e+07 7.86957e+06 0.00329231 1.3823e+07 50.8979 0.0425687 0.995374 0 49.7223 GTEX-1399R-1826-SM-5J2M9 1 B1 2 pieces; moderate plaques; external fat up to 2mm thick 6.5 Blood Vessel Artery - Coronary 0001621 145 1062 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.976563 314332 0.969858 0.98068 0.799905 25328 1 76 0.0044138 212 0 1.1132e+08 0.029841 1.01318e+06 1.13513e+08 6.64004e+06 25369 5.51266e+07 0 0.169954 0.98068 0.78445 1.1132e+08 0.00643846 2.41495e+07 9.42854e+06 2.42735e+07 251 2.42977e+07 1.79614e+07 0.00542188 2.45558e+07 50.2641 0.00892567 0.984796 0 50.1279 GTEX-1399R-1826-SM-E9IIE 1 B1 2 pieces; moderate plaques; external fat up to 2mm thick Blood Vessel Artery - Coronary 0001621 145 1062 BP-61755 DNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2015 LCSET-10755 04/03/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1399R-1926-SM-5K7X8 0 B1 2 pieces 8.4 Heart Heart - Left Ventricle 0006566 149 1058 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.98962 156020 0.98737 0.991695 0.858793 19931 1 76 0.00267263 269 0 8.48714e+07 0.0123881 3.43338e+06 8.55821e+07 1.6285e+07 19939 4.2286e+07 0 0.128577 0.991695 0.851661 8.48714e+07 0.00371178 1.8814e+07 3.32596e+07 1.82479e+07 272 1.8156e+07 1.27671e+07 0.00319112 1.90568e+07 51.2103 0.040118 0.993771 0 49.2362 GTEX-1399R-2026-SM-5K7WN 1 B1 6 pieces; all pieces contain lymphoid nodulles 5.8 Small Intestine Small Intestine - Terminal Ileum 0001211 155 1052 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.985694 232974 0.968439 0.988425 0.800505 23411 1 76 0.00294647 148 0 6.73412e+07 0.0309367 1.3502e+06 6.81299e+07 1.15847e+07 23430 3.34891e+07 0 0.167934 0.988425 0.791239 6.73412e+07 0.0044358 1.50678e+07 1.2117e+07 1.48329e+07 174 1.47832e+07 8.37568e+06 0.00368908 1.5297e+07 50.8541 0.019818 0.991156 0 49.6071 GTEX-1399R-2126-SM-5K7WZ 1 B1 6 pieces; 4 contain mucosa (NOT target); all contain muscularis 7.7 Colon Colon - Sigmoid 0001159 153 1054 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990499 130865 0.975291 0.992789 0.849772 21553 1 76 0.00257697 141 0 6.22192e+07 0.0244104 603277 6.26711e+07 1.02804e+07 21562 3.09771e+07 0 0.125519 0.992789 0.843644 6.22192e+07 0.00379346 1.33448e+07 5.56302e+06 1.33949e+07 147 1.33768e+07 1.14917e+07 0.00318381 1.34919e+07 50.2141 0.00962608 0.99508 0 50.0938 GTEX-1399R-2226-SM-5P9JB 1 B1 6 pieces; all contain only mucosa, no muscularis 6.1 Colon Colon - Transverse 0001157 166 1041 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991579 305690 0.973393 0.992285 0.85491 22766 1 76 0.00345006 281 0 9.22148e+07 0.0255392 1.8652e+06 9.29318e+07 3.01312e+06 22783 4.58935e+07 0 0.118483 0.992285 0.848314 9.22148e+07 0.00379717 2.05957e+07 1.15361e+07 2.08219e+07 304 2.06727e+07 1.47634e+07 0.00362349 2.08002e+07 50.1538 0.0200706 0.992991 0 50.2731 GTEX-1399R-2226-SM-DLIQ5 1 B1 6 pieces; all contain only mucosa, no muscularis Colon Colon - Transverse 0001157 166 1041 BP-51623 DNA Extraction from Paxgene-derived Lysate Plate Based 04/16/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1399R-2326-SM-5PNYT 1 B1 2 pieces; well dissected 6.9 Blood Vessel Artery - Tibial 0007610 326 881 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.985149 120389 0.968968 0.98619 0.855539 21532 1 76 0.00318419 170 0 8.20625e+07 0.0306437 533690 8.32116e+07 2.81504e+06 21548 4.0797e+07 0 0.113429 0.98619 0.843724 8.20625e+07 0.00388409 1.71675e+07 6.89204e+06 1.74139e+07 180 1.72463e+07 1.81087e+07 0.00353377 1.74124e+07 50.2396 0.00641365 0.987231 0 50.3563 GTEX-1399R-2426-SM-5IJFC 1 B1 2 pieces; all with external fat up to 1 mm thick 7 Nerve Nerve - Tibial 0001323 327 880 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986254 209387 0.967391 0.987914 0.757471 25175 1 76 0.00475546 218 0 9.48142e+07 0.032304 475958 9.59741e+07 6.49169e+06 25224 4.71218e+07 0 0.20992 0.987914 0.748317 9.48142e+07 0.00493204 2.08455e+07 8.33694e+06 2.10018e+07 206 2.10165e+07 1.47153e+07 0.0048436 2.09838e+07 49.961 0.00495923 0.989574 0 50.1867 GTEX-1399R-2526-SM-5IFG2 1 B1 2 pieces; 10% internal fat 7.9 Muscle Muscle - Skeletal 0011907 329 878 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.991234 201935 0.982249 0.993898 0.868385 19683 1 76 0.00202026 158 0 6.78229e+07 0.0174717 1.084e+06 6.82393e+07 7.60183e+06 19688 3.37595e+07 0 0.113864 0.993898 0.863086 6.78229e+07 0.00334631 1.47186e+07 7.71751e+06 1.47094e+07 166 1.47202e+07 1.34998e+07 0.0026815 1.48742e+07 50.2602 0.0158853 0.996561 0 49.9843 GTEX-1399R-2626-SM-5KLZ7 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 331 876 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986956 132246 0.97499 0.989387 0.787558 23010 1 76 0.00392791 146 0 6.82015e+07 0.0247548 529549 6.89331e+07 3.14173e+06 23037 3.38919e+07 0 0.187432 0.989387 0.7792 6.82015e+07 0.00520958 1.50221e+07 6.31215e+06 1.51118e+07 155 1.51187e+07 1.0129e+07 0.00456717 1.51734e+07 50.0903 0.00768207 0.991818 0 50.1488 GTEX-1399R-2726-SM-5IJBA 1 B1 6 pieces; 10-20 % intradermal fat 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 334 873 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.985073 248104 0.972376 0.988044 0.801939 23115 1 76 0.0023341 188 0 7.77036e+07 0.0273981 556404 7.86438e+07 9.76204e+06 23137 3.86292e+07 0 0.170438 0.988044 0.792351 7.77036e+07 0.00417185 1.6991e+07 9.28423e+06 1.70153e+07 192 1.69943e+07 1.21769e+07 0.00325021 1.72346e+07 50.351 0.00707498 0.991016 0 50.0358 GTEX-1399R-5010-SM-AN3YF B1 Heart Heart - Left Ventricle 0006566 153 ChIP-Seq GTEX-1399S-0006-SM-5NQ7U B1 8.5 Blood Whole Blood 0013756 -62 BP-43530 RNA isolation_PAXgene Blood RNA (Manual) 09/13/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991581 708693 0.954509 0.993012 0.828637 19097 1 76 0.00228589 124 0 6.8051e+07 0.0450071 330633 6.85299e+07 5.5569e+06 19106 3.38879e+07 0 0.125872 0.993012 0.822846 6.8051e+07 0.00334092 1.47851e+07 3.50802e+07 1.49461e+07 143 1.49457e+07 1.44831e+07 0.00281264 1.49056e+07 49.9328 0.00482465 0.994443 0 50.2707 GTEX-1399S-0008-SM-62LDF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 158 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990328 544504 0.975954 0.99357 0.862198 20540 1 76 0.00235036 292 0 1.00514e+08 0.0237091 300337 1.01164e+08 7.68786e+06 20557 5.00095e+07 0 0.113756 0.99357 0.856653 1.00514e+08 0.00275824 2.24967e+07 1.7451e+07 2.25871e+07 262 2.26712e+07 2.68047e+07 0.00255364 2.2724e+07 50.0582 0.00296881 0.996811 0 50.1002 GTEX-1399S-0126-SM-5IJCF 0 B1 6 pieces, trace adherent dermal fat; squamous epithelium is ~40-50 microns 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 60 540 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98726 345217 0.96105 0.990395 0.802317 21442 1 76 0.00219439 179 0 6.63982e+07 0.0388015 762693 6.70422e+07 8.93933e+06 21461 3.30029e+07 0 0.158733 0.990395 0.794611 6.63982e+07 0.00415326 1.4455e+07 1.57925e+07 1.44398e+07 175 1.43683e+07 9.20162e+06 0.00317073 1.47371e+07 50.6335 0.0113763 0.99353 0 49.9738 GTEX-1399S-0226-SM-5IFFG 1 B1 2 pieces, minmal congestion 7.1 Spleen Spleen 0002106 62 538 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.98744 280708 0.965515 0.990814 0.804301 23777 1 76 0.00253844 165 0 7.67484e+07 0.0336872 398294 7.746e+07 8.92019e+06 23803 3.81297e+07 0 0.161214 0.990814 0.796912 7.67484e+07 0.00408241 1.68396e+07 1.05404e+07 1.69956e+07 186 1.7042e+07 1.22852e+07 0.00330779 1.70447e+07 50.004 0.00514193 0.994187 0 50.2305 GTEX-1399S-0326-SM-5IFFS 1 B1 2 pieces, ~40% interstitial fat; rep delineated; rare Islets, rep encircled, well preserved 7 Pancreas Pancreas 0001150 66 534 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990815 198914 0.974639 0.993696 0.844363 21518 1 76 0.0022933 118 0 7.36382e+07 0.0251979 244897 7.41054e+07 8.87237e+06 21537 3.66432e+07 0 0.130276 0.993696 0.83904 7.36382e+07 0.00371949 1.6763e+07 1.72718e+07 1.69099e+07 128 1.69e+07 2.01066e+07 0.00300433 1.69834e+07 50.1231 0.00330471 0.996577 0 50.2182 GTEX-1399S-0426-SM-5IFG5 1 B1 2 pieces all cortex, rim of fibrous tissue up to ~0.5mm, delineated 8.3 Adrenal Gland Adrenal Gland 0002369 70 530 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.991207 254455 0.978093 0.993638 0.83631 22475 1 76 0.00206318 201 0 7.93303e+07 0.0215896 1.8161e+06 7.98382e+07 8.56324e+06 22493 3.94885e+07 0 0.141783 0.993638 0.830989 7.93303e+07 0.00335938 1.75753e+07 1.35593e+07 1.759e+07 250 1.7568e+07 1.25635e+07 0.00270969 1.77772e+07 50.2958 0.0227472 0.99607 0 50.0208 GTEX-1399S-0526-SM-5IJG8 1 B1 6 pieces, glomeruli present--severe glomerulosclerosis, interstitial fibrosis and diabetic glomerulopathy 5.9 Kidney Kidney - Cortex 0001225 75 525 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98801 166976 0.974227 0.989612 0.816124 25645 1 76 0.00469968 274 0 1.01102e+08 0.0251268 768908 1.02163e+08 6.4761e+06 25673 5.02876e+07 0 0.158103 0.989612 0.807646 1.01102e+08 0.00474763 2.2281e+07 1.15768e+07 2.24681e+07 275 2.24069e+07 1.65349e+07 0.00472361 2.24962e+07 50.0994 0.00752627 0.991213 0 50.209 GTEX-1399S-0826-SM-5KM23 1 B1 2 pieces, no abnormaliites 6.2 Heart Heart - Atrial Appendage 0006631 80 520 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988873 220647 0.977441 0.991551 0.847973 20634 1 76 0.00351104 150 0 7.24342e+07 0.022291 1.56444e+06 7.30514e+07 3.23803e+06 20646 3.60152e+07 0 0.129467 0.991551 0.840809 7.24342e+07 0.00472763 1.52094e+07 1.09451e+07 1.5339e+07 183 1.52394e+07 1.13312e+07 0.00411769 1.54762e+07 50.3855 0.0214156 0.994229 0 50.212 GTEX-1399S-0926-SM-5PNVQ 1 B1 2 pieces, ~20% occlusive atherosis, delineated, rim of adherent fat ~0.5mm 7.9 Blood Vessel Artery - Coronary 0001621 85 515 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.988954 160176 0.979611 0.991325 0.878576 21217 1 76 0.0019803 150 0 6.49687e+07 0.0198328 272165 6.55373e+07 5.75029e+06 21225 3.23012e+07 0 0.101034 0.991325 0.870954 6.49687e+07 0.00335902 1.41026e+07 5.76086e+06 1.42462e+07 158 1.41683e+07 1.42505e+07 0.00266801 1.43395e+07 50.3003 0.00415283 0.993696 0 50.2534 GTEX-1399S-1026-SM-5KLZ9 1 B1 2 pieces, no significant interstitial fibrosis 8.4 Heart Heart - Left Ventricle 0006566 89 511 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988687 124367 0.984447 0.990611 0.855359 19877 1 76 0.00338447 199 0 7.76368e+07 0.015299 2.13551e+06 7.83727e+07 3.28514e+06 19887 3.86539e+07 0 0.129087 0.990611 0.847328 7.76368e+07 0.004259 1.68628e+07 2.14468e+07 1.70038e+07 253 1.6819e+07 1.17211e+07 0.00382088 1.71768e+07 50.5262 0.0272481 0.992535 0 50.2081 GTEX-1399S-1226-SM-5J1O6 1 B1 6 pieces all muscularis, focal attached serosal adipose tissues, delineated 6.8 Esophagus Esophagus - Muscularis 0004648 105 495 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 EXCLUDE 0.987358 173154 0.975047 0.989669 0.827916 23522 1 76 0.00399 163 0 7.44437e+07 0.0246298 367768 7.52208e+07 4.3135e+06 23538 3.70073e+07 0 0.147131 0.989669 0.819362 7.44437e+07 0.00485672 1.6416e+07 7.22009e+06 1.65794e+07 167 1.65649e+07 1.34489e+07 0.00442235 1.65984e+07 50.0506 0.00488918 0.99198 0 50.2476 GTEX-1399S-1326-SM-5P9GH 1 B1 6 pieces, squamous mucosa is ~0.5mm ~25% thickness 9.2 Esophagus Esophagus - Mucosa 0006920 106 494 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990941 382612 0.976435 0.991307 0.844275 22476 1 76 0.00295555 381 0 1.21322e+08 0.0231589 982561 1.22386e+08 3.87036e+06 22494 6.04552e+07 0 0.13216 0.991307 0.836936 1.21322e+08 0.00352557 2.7197e+07 2.17311e+07 2.74789e+07 334 2.73172e+07 2.38492e+07 0.00324045 2.74088e+07 50.0837 0.0080284 0.991673 0 50.2578 GTEX-1399S-1426-SM-5PNYQ 1 B1 2 pieces, ~10% vascular/fibrous tissue 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 109 491 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988331 167557 0.978666 0.98952 0.87833 22256 1 76 0.00296015 280 0 1.00522e+08 0.0210937 938587 1.01586e+08 3.08527e+06 22271 5.00326e+07 0 0.100336 0.98952 0.869125 1.00522e+08 0.00357633 2.19957e+07 8.50463e+06 2.24127e+07 305 2.22416e+07 2.06905e+07 0.00326787 2.22809e+07 50.0442 0.0092393 0.990709 0 50.4695 GTEX-1399S-1526-SM-5P9JC 1 B1 6 pieces, all muscularis, good specimens 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 105 495 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.989504 297095 0.976904 0.990235 0.877841 21946 1 76 0.00313424 214 0 9.24921e+07 0.0227946 938008 9.34042e+07 3.74857e+06 21958 4.59974e+07 0 0.099063 0.990235 0.869269 9.24921e+07 0.00378926 2.01082e+07 7.79031e+06 2.03446e+07 252 2.01578e+07 1.79575e+07 0.00346151 2.03636e+07 50.2539 0.0100425 0.990966 0 50.2922 GTEX-1399S-1626-SM-5P9GI 1 B1 6 pieces, mucosa well prserved, up to ~1mm, 20-25% thickness 7.2 Stomach Stomach 0000945 120 480 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.979585 251423 0.976356 0.980177 0.828949 23769 1 76 0.00297265 398 0 1.0651e+08 0.0229092 1.17417e+06 1.08664e+08 3.6323e+06 23796 5.2966e+07 0 0.147406 0.980177 0.812517 1.0651e+08 0.00381495 2.36481e+07 3.94029e+07 2.42023e+07 356 2.40319e+07 1.82767e+07 0.00339355 2.38849e+07 49.8466 0.0108055 0.980769 0 50.579 GTEX-1399S-1726-SM-5L3DI 1 B1 2 pieces, minimal edema/congestion 8.8 Lung Lung 0008952 122 478 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988184 183176 0.974328 0.991779 0.817028 23748 1 76 0.00316594 170 0 7.68462e+07 0.0252082 289459 7.74833e+07 7.61919e+06 23775 3.81988e+07 0 0.1573 0.991779 0.810311 7.68462e+07 0.00395475 1.70657e+07 6.48865e+06 1.70972e+07 175 1.71693e+07 1.45948e+07 0.00355891 1.72455e+07 50.1108 0.00373576 0.995373 0 50.046 GTEX-1399S-1926-SM-5J2M5 1 B1 6 pieces, mucosa fairly well preserved, ~0.3-0.4mm, up to ~40% thickness 7.4 Colon Colon - Transverse 0001157 139 461 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983446 214147 0.972265 0.987372 0.786806 24117 1 76 0.0043545 292 0 9.95133e+07 0.0272784 2.08357e+06 1.00786e+08 5.27521e+06 24150 4.93975e+07 0 0.185459 0.987372 0.77687 9.95133e+07 0.00605688 2.18272e+07 1.79887e+07 2.20458e+07 284 2.19997e+07 1.27265e+07 0.00520231 2.22303e+07 50.2606 0.0206732 0.991297 0 50.2491 GTEX-1399S-2026-SM-5KM4B 1 B1 6 pieces, ~well preserved, lymphoid/Peyer aggregates are up to ~40% total tissue 8 Small Intestine Small Intestine - Terminal Ileum 0001211 141 459 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989134 222941 0.967789 0.990917 0.765035 24620 1 76 0.00326029 215 0 8.73627e+07 0.0318638 713994 8.81635e+07 5.59071e+06 24658 4.34769e+07 0 0.202753 0.990917 0.758086 8.73627e+07 0.00411535 1.92983e+07 9.54969e+06 1.94225e+07 220 1.93878e+07 1.29124e+07 0.00368705 1.94772e+07 50.1151 0.00809852 0.9927 0 50.1604 GTEX-1399S-2126-SM-5J2MH 1 B1 2 pieces, atrophic for stated age of patient 8.2 Ovary Ovary 0000992 143 457 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984205 177340 0.973151 0.988221 0.818145 24279 1 76 0.00418867 177 0 9.186e+07 0.0265124 266246 9.29548e+07 4.7565e+06 24311 4.55987e+07 0 0.155006 0.988221 0.808509 9.186e+07 0.00591672 2.01307e+07 7.99202e+06 2.02898e+07 191 2.03729e+07 1.80119e+07 0.00504918 2.03951e+07 50.0272 0.00286425 0.992238 0 50.1968 GTEX-1399S-2226-SM-5IFEW 1 B1 2 pieces mainly myometrium, thin (~0.5mm) layer of inactive/basalis endometrial glands/stroma 8.4 Uterus Uterus 0000995 144 456 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990638 222294 0.972248 0.993451 0.816116 23655 1 76 0.00203931 289 0 9.17733e+07 0.0273781 198955 9.23783e+07 1.0098e+07 23686 4.56551e+07 0 0.156132 0.993451 0.810771 9.17733e+07 0.0033727 2.00947e+07 7.92692e+06 2.02146e+07 261 2.0244e+07 1.7327e+07 0.00270412 2.03145e+07 50.0868 0.0021537 0.996264 0 50.1488 GTEX-1399S-2226-SM-DKTR7 1 B1 2 pieces mainly myometrium, thin (~0.5mm) layer of inactive/basalis endometrial glands/stroma Uterus Uterus 0000995 144 456 BP-53099 DNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1399S-2226-SM-DLIPM 1 B1 2 pieces mainly myometrium, thin (~0.5mm) layer of inactive/basalis endometrial glands/stroma Uterus Uterus 0000995 144 456 BP-53099 DNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1399S-2326-SM-5K7YV 1 B1 6 pieces, squamous mucosa is ~150-200 microns 7 Vagina Vagina 0000996 146 454 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990233 147039 0.974443 0.992926 0.802056 22290 1 76 0.0026238 138 0 5.87943e+07 0.0253045 210894 5.92132e+07 1.01682e+07 22307 2.92545e+07 0 0.172387 0.992926 0.796382 5.87943e+07 0.00408496 1.31141e+07 6.79482e+06 1.31503e+07 137 1.31703e+07 1.08926e+07 0.0033524 1.32518e+07 50.1541 0.0035616 0.995619 0 50.069 GTEX-1399S-2326-SM-DO3X1 1 B1 6 pieces, squamous mucosa is ~150-200 microns Vagina Vagina 0000996 146 454 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1399S-2426-SM-5K7U3 0 B1 4 pieces, clean specimens, minimal fat 7.9 Nerve Nerve - Tibial 0001323 149 451 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983681 128345 0.977598 0.98592 0.85371 23323 1 76 0.00421701 209 0 8.81975e+07 0.0220847 333441 8.94571e+07 6.40279e+06 23345 4.38027e+07 0 0.123888 0.98592 0.841689 8.81975e+07 0.00495099 1.94484e+07 7.55471e+06 1.95663e+07 206 1.95513e+07 1.77745e+07 0.00458317 1.96629e+07 50.1423 0.00372738 0.988158 0 50.1511 GTEX-1399S-2626-SM-5L3DU 0 B1 2 pieces clean specimens; focal Monckeberg medial sclerosis, encircled 8.1 Blood Vessel Artery - Tibial 0007610 153 447 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988548 126465 0.980582 0.99215 0.874649 19999 1 76 0.00289653 146 0 6.5882e+07 0.0190038 252143 6.64032e+07 6.47947e+06 20010 3.27517e+07 0 0.105933 0.99215 0.867783 6.5882e+07 0.00376405 1.42934e+07 4.89609e+06 1.43763e+07 153 1.44139e+07 1.40723e+07 0.00332871 1.44758e+07 50.1071 0.00379715 0.995752 0 50.1445 GTEX-1399S-2726-SM-5KM22 0 B1 2 pieces, ~10% interstitial fat, delineated 7.2 Muscle Muscle - Skeletal 0011907 155 445 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987976 153270 0.981557 0.990349 0.868027 20005 1 76 0.0035173 182 0 7.78179e+07 0.0182556 954308 7.85762e+07 3.44153e+06 20016 3.87215e+07 0 0.113529 0.990349 0.85965 7.78179e+07 0.00453344 1.70474e+07 9.01952e+06 1.71794e+07 198 1.71701e+07 1.53414e+07 0.00402415 1.72286e+07 50.0851 0.012145 0.992722 0 50.1929 GTEX-1399S-5001-SM-AN3YL B1 Heart Heart - Left Ventricle 0006566 91 ChIP-Seq GTEX-1399S-5019-SM-AN3YM B1 Muscle Muscle - Skeletal 0011907 157 ChIP-Seq GTEX-1399T-0004-SM-5HJPS_1 B1 Blood Whole Blood 0013756 700 BP-43369 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-1399T-0008-SM-62LDB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 947 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990023 552350 0.970105 0.99337 0.855966 19828 1 76 0.00237597 186 0 8.41726e+07 0.0295596 163338 8.47344e+07 6.16340e+06 19842 4.18754e+07 0 0.114139 0.99337 0.850291 8.41726e+07 0.00296067 1.86509e+07 1.91469e+07 1.88264e+07 184 1.89036e+07 2.17834e+07 0.00266734 1.88428e+07 49.9195 0.00192765 0.996716 0 50.2342 GTEX-1399T-0011-R10b-SM-AHZ6E B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 745 ChIP-Seq GTEX-1399T-0011-R11a-SM-5J2O1 B1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 745 BP-45522 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981843 487909 0.942981 0.985816 0.741128 23920 1 76 0.00447301 149 0 8.09377e+07 0.0566093 1.09109e+06 8.21022e+07 4.45096e+06 23949 4.0117e+07 0 0.201854 0.985816 0.730616 8.09377e+07 0.00624304 1.73677e+07 1.37792e+07 1.74016e+07 172 1.74744e+07 9.74629e+06 0.00535446 1.75973e+07 50.1753 0.0132895 0.989789 0 50.0487 GTEX-1399T-0011-R1b-SM-5DUWN B1, A1 7.8 Brain Brain - Hippocampus 0001954 745 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988643 498638 0.956552 0.991788 0.843323 22028 1 76 0.00210336 155 0 6.07515e+07 0.0432712 6.74073e+06 6.12545e+07 5.63194e+06 22040 3.02152e+07 0 0.113229 0.991788 0.836398 6.07515e+07 0.00319603 1.3315e+07 2.03424e+07 1.33491e+07 202 1.32379e+07 5.24465e+06 0.00264796 1.35995e+07 50.6738 0.110045 0.994934 0 50.0638 GTEX-1399T-0011-R2b-SM-5DUXM B1, A1 7.4 Brain Brain - Substantia nigra 0002038 745 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.988637 895184 0.938612 0.991366 0.810023 22778 1 76 0.00203356 159 0 6.49035e+07 0.0610868 5.09394e+06 6.54688e+07 5.9402e+06 22793 3.2292e+07 0 0.128589 0.991366 0.803029 6.49035e+07 0.00319262 1.39246e+07 3.45573e+07 1.39402e+07 187 1.38484e+07 7.5182e+06 0.00261149 1.41962e+07 50.6201 0.0778072 0.994095 0 50.0281 GTEX-1399T-0011-R4b-SM-5DUVX B1, A1 7.4 Brain Brain - Amygdala 0001876 745 BP-44932 RNA isolation_PAXgene Tissue miRNA 10/23/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.987791 483633 0.960621 0.991377 0.846334 21715 1 76 0.00211504 150 0 5.90667e+07 0.0391479 5.75248e+06 5.95804e+07 5.03287e+06 21727 2.93476e+07 0 0.114286 0.991377 0.839036 5.90667e+07 0.00349935 1.30536e+07 2.11065e+07 1.2801e+07 193 1.27358e+07 4.77875e+06 0.00280469 1.33152e+07 51.1119 0.0965498 0.994963 0 49.5115 GTEX-1399T-0011-R5b-SM-5IJDK B1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 745 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988791 723163 0.950332 0.992224 0.81553 24383 1 76 0.00233353 199 0 7.60142e+07 0.0493819 3.31787e+06 7.66099e+07 1.06317e+07 24404 3.77724e+07 0 0.134802 0.992224 0.809188 7.60142e+07 0.00413181 1.64952e+07 2.27928e+07 1.64068e+07 238 1.63534e+07 8.41489e+06 0.00322956 1.68088e+07 50.6867 0.0433086 0.995656 0 49.8657 GTEX-1399T-0011-R6b-SM-5K7YL B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 745 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990732 421939 0.956697 0.993355 0.820709 23702 1 76 0.00275276 155 0 6.7326e+07 0.0430448 3.96501e+06 6.77764e+07 1.21184e+07 23717 3.35024e+07 0 0.135988 0.993355 0.815256 6.7326e+07 0.00399621 1.47756e+07 1.75948e+07 1.46288e+07 200 1.46087e+07 6.93808e+06 0.00337284 1.49583e+07 50.5911 0.0585014 0.995979 0 49.7503 GTEX-1399T-0011-R8b-SM-5IJD8 B1, A1 6.8 Brain Brain - Hypothalamus 0001898 745 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988717 727190 0.95174 0.992177 0.82537 24320 1 76 0.00229833 202 0 7.5703e+07 0.0479483 3.00648e+06 7.62999e+07 9.58973e+06 24339 3.76158e+07 0 0.12637 0.992177 0.818914 7.5703e+07 0.00411712 1.65016e+07 2.07386e+07 1.64679e+07 238 1.64431e+07 8.56837e+06 0.00320456 1.67884e+07 50.5196 0.0394035 0.995637 0 49.9489 GTEX-1399T-0126-SM-5KM15 1 B1 2 pieces; interstitial fibrosis 6.2 Thyroid Thyroid 0002046 745 1100 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987179 195740 0.968988 0.989443 0.741521 25143 1 76 0.00396104 169 0 8.88831e+07 0.0306819 485481 8.98315e+07 4.1667e+06 25178 4.41691e+07 0 0.227467 0.989443 0.733692 8.88831e+07 0.00509399 1.96027e+07 1.22729e+07 1.9734e+07 193 1.98129e+07 1.3212e+07 0.00452622 1.97162e+07 49.8776 0.00540435 0.991706 0 50.1669 GTEX-1399T-0426-SM-5PNVJ 1 B1 2 pieces; one with extensive fibrosis and scarring suggesting old infarct and other with large vessels, nerves and surrounding fat up to 30%, myocyte hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 756 1089 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990366 79983 0.99028 0.992005 0.844765 17535 1 76 0.00224152 262 0 6.96986e+07 0.00969275 4.45135e+06 7.02603e+07 5.55922e+06 17536 3.47361e+07 0 0.145516 0.992005 0.838011 6.96986e+07 0.00344628 1.49837e+07 4.40083e+07 1.54577e+07 325 1.51462e+07 2.54078e+06 0.00284291 1.53858e+07 50.3923 0.0633551 0.993643 0 50.7786 GTEX-1399T-0426-SM-CYKV1 1 B1 2 pieces; one with extensive fibrosis and scarring suggesting old infarct and other with large vessels, nerves and surrounding fat up to 30%, myocyte hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 756 1089 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 RIP-Seq GTEX-1399T-0526-SM-5J1NC 1 B1 6 pieces; well trimmed and with atheromatous plaque formation 5.9 Blood Vessel Artery - Aorta 0001496 759 1086 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98553 262160 0.968859 0.987034 0.736242 23750 1 76 0.00426732 170 0 9.18826e+07 0.0307105 179014 9.30896e+07 5.53639e+06 23788 4.55874e+07 0 0.232617 0.987034 0.726696 9.18826e+07 0.00504881 1.98784e+07 9.2515e+06 1.99199e+07 188 1.99272e+07 1.4426e+07 0.00465747 2.00099e+07 50.1035 0.00192303 0.988539 0 50.0522 GTEX-1399T-0726-SM-5J1MH 1 B1 2 pieces, ~20% of internal fat, interstitial fibrosis and myocyte hypertrophy 6.3 Heart Heart - Atrial Appendage 0006631 768 1077 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988105 256275 0.975224 0.990214 0.796839 23762 1 76 0.00401585 203 0 9.69242e+07 0.0244928 2.4414e+06 9.78821e+07 5.44142e+06 23790 4.81814e+07 0 0.178385 0.990214 0.789041 9.69242e+07 0.0048918 2.06188e+07 1.11771e+07 2.07633e+07 230 2.07733e+07 1.53424e+07 0.00445289 2.07941e+07 50.0251 0.0249422 0.992324 0 50.1746 GTEX-1399T-0826-SM-5IFES 1 B1 2 pieces; some congestion and steatosis 6.2 Liver Liver 0001114 771 1074 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989455 348602 0.970376 0.992549 0.800868 22603 1 76 0.00226286 159 0 8.30551e+07 0.0294688 1.05311e+06 8.36785e+07 8.68181e+06 22628 4.12906e+07 0 0.169507 0.992549 0.794901 8.30551e+07 0.00377747 1.79881e+07 1.20703e+07 1.80025e+07 196 1.80338e+07 1.40153e+07 0.0030178 1.81958e+07 50.2236 0.0125852 0.995643 0 50.02 GTEX-1399T-1226-SM-5P9J5 2 B1 2 pieces; one piece with 50% stromal hyperplasia devoid of glandular component; numerous corpora amylacea; sloughed glandular epithelium 6.3 Prostate Prostate 0002367 783 1062 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990642 333919 0.967681 0.991339 0.781636 25957 1 76 0.00335959 276 0 1.01492e+08 0.0319968 669788 1.02379e+08 3.50294e+06 25995 5.05019e+07 0 0.186045 0.991339 0.774866 1.01492e+08 0.003859 2.20665e+07 1.01603e+07 2.21896e+07 260 2.20717e+07 1.67918e+07 0.00360912 2.22617e+07 50.2144 0.00654226 0.992035 0 50.1391 GTEX-1399T-1326-SM-5PNVH 1 B1 2 pieces; ~10% fibrovascular component 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 791 1054 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99214 211550 0.972664 0.993648 0.788694 24394 1 76 0.0020625 212 0 8.82847e+07 0.027033 551918 8.88491e+07 7.70067e+06 24423 4.39366e+07 0 0.18397 0.993648 0.783685 8.82847e+07 0.0030382 1.93612e+07 1.07898e+07 1.95227e+07 237 1.94317e+07 1.381e+07 0.00254961 1.95864e+07 50.1982 0.00621186 0.995156 0 50.2078 GTEX-1399T-1426-SM-664M8 1 B1 6 pieces; well trimmed 6.6 Esophagus Esophagus - Muscularis 0004648 798 1047 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.986348 192521 0.968018 0.986786 0.793138 24071 1 76 0.00261204 271 0 9.26033e+07 0.0317824 1.81159e+06 9.38433e+07 6.61230e+06 24103 4.59653e+07 0 0.174881 0.986786 0.782658 9.26033e+07 0.00384483 2.01255e+07 9.50809e+06 2.01872e+07 279 2.00653e+07 1.13118e+07 0.00322816 2.02926e+07 50.2816 0.0193044 0.987225 0 50.0765 GTEX-1399T-1526-SM-5P9J6 1 B1 2 pieces; spermatogenesis noted; increased peritubular fibrosis and focal hyalinization 6.5 Testis Testis 0000473 796 1049 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992134 236131 0.951124 0.992568 0.761172 32922 1 76 0.00329647 277 0 1.06062e+08 0.0485976 1.07864e+06 1.06856e+08 3.29404e+06 32984 5.28437e+07 0 0.189952 0.992568 0.755515 1.06062e+08 0.00353609 2.28911e+07 1.22348e+07 2.29879e+07 285 2.29286e+07 1.65352e+07 0.00341623 2.29943e+07 50.0715 0.0100944 0.993001 0 50.1055 GTEX-1399T-2426-SM-5L3FJ 1 B1 2 pieces; up to 10 to 20% internal fat, small portion of tendon 6.1 Muscle Muscle - Skeletal 0011907 938 907 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989354 191294 0.982258 0.993018 0.872016 19580 1 76 0.00284069 130 0 7.15489e+07 0.0175389 548549 7.2052e+07 7.61349e+06 19591 3.55857e+07 0 0.110243 0.993018 0.865927 7.15489e+07 0.0036525 1.57094e+07 8.10501e+06 1.56012e+07 156 1.5687e+07 1.54227e+07 0.0032451 1.58623e+07 50.2778 0.00761324 0.996681 0 49.8271 GTEX-1399T-2426-SM-CYKW2 1 B1 2 pieces; up to 10 to 20% internal fat, small portion of tendon 6.1 Muscle Muscle - Skeletal 0011907 938 907 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 RIP-Seq GTEX-1399T-2526-SM-DLIPI 1 B1 2 pieces; one with 10-20% external (predominant) and internal fat Nerve Nerve - Tibial 0001323 939 906 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1399T-2526-SM-DMZ31 1 B1 2 pieces; one with 10-20% external (predominant) and internal fat Nerve Nerve - Tibial 0001323 939 906 BP-52264 DNA Extraction from Paxgene-derived Lysate Plate Based 05/01/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1399T-2626-SM-5L3E4 1 B1 2 pieces; ? orientation, intimal thickening and atherosclerosis with few scattered minute calcium deposits, 1.37mm attached fat 7.4 Blood Vessel Artery - Tibial 0007610 943 902 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987466 191206 0.973602 0.991411 0.820717 21792 1 76 0.00316976 136 0 6.86064e+07 0.0260052 194896 6.92008e+07 6.8861e+06 21811 3.4074e+07 0 0.152885 0.991411 0.813668 6.86064e+07 0.00407799 1.47253e+07 5.38803e+06 1.47899e+07 149 1.48497e+07 1.30833e+07 0.00362207 1.49134e+07 50.107 0.00281638 0.995356 0 50.1095 GTEX-1399T-2726-SM-5K7XK 1 B1 2 pieces 7 Adipose Tissue Adipose - Subcutaneous 0002190 945 900 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990545 154991 0.977385 0.993048 0.824668 22549 1 76 0.00270496 146 0 6.48226e+07 0.0222754 446284 6.52764e+07 1.22871e+07 22566 3.22512e+07 0 0.152717 0.993048 0.818935 6.48226e+07 0.00403967 1.43436e+07 6.70834e+06 1.4349e+07 153 1.43524e+07 1.18963e+07 0.00337063 1.44984e+07 50.253 0.00683684 0.995551 0 50.0094 GTEX-1399T-2826-SM-5KLYZ 1 B1 6 pieces; ~15% internal fat; epidermis 34.81 um thick 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 947 898 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986787 165774 0.975746 0.989296 0.787852 23350 1 76 0.00389903 177 0 7.25025e+07 0.0239592 335994 7.32869e+07 3.26942e+06 23374 3.60302e+07 0 0.187894 0.989296 0.779419 7.25025e+07 0.00517236 1.57721e+07 7.48591e+06 1.58732e+07 156 1.59198e+07 1.23048e+07 0.00453408 1.59e+07 49.9689 0.00458464 0.991806 0 50.1598 GTEX-1399T-2926-SM-5IFF8 1 B1 1 pieces; adenohypophysis with few squamous nests 6.6 Pituitary Pituitary 0000007 1012 833 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987635 364555 0.959169 0.991421 0.782326 25692 1 76 0.00235324 200 0 8.79778e+07 0.0405906 696853 8.87391e+07 9.82313e+06 25723 4.36708e+07 0 0.176844 0.991421 0.775614 8.79778e+07 0.00412122 1.91215e+07 1.38711e+07 1.92791e+07 215 1.93353e+07 1.34305e+07 0.00323385 1.93872e+07 50.0671 0.00785283 0.995207 0 50.2053 GTEX-1399T-3026-SM-5KLZC 1 B1 2 pieces 6.7 Brain Brain - Cortex 0001870 1014 831 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987201 516134 0.955233 0.98947 0.810437 24486 1 76 0.00387115 269 0 9.34198e+07 0.0444333 3.72869e+06 9.4414e+07 4.10557e+06 24509 4.64665e+07 0 0.144796 0.98947 0.801903 9.34198e+07 0.00486455 2.00709e+07 3.16222e+07 2.041e+07 273 2.03568e+07 1.03773e+07 0.00436671 2.03072e+07 49.9391 0.039493 0.991738 0 50.4188 GTEX-1399T-3026-SM-CYKW1 1 B1 2 pieces 6.7 Brain Brain - Cortex 0001870 1014 831 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 RIP-Seq GTEX-1399T-3126-SM-5IJFS 1 B1 2 pieces; Purkinje cells well visualized 6.3 Brain Brain - Cerebellum 0002037 1012 833 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985406 323816 0.948218 0.987392 0.74375 24383 1 76 0.00508032 200 0 8.93366e+07 0.0514005 1.50394e+06 9.04774e+07 6.32555e+06 24413 4.43836e+07 0 0.204467 0.987392 0.734373 8.93366e+07 0.00529238 1.92629e+07 1.74414e+07 1.94716e+07 224 1.95062e+07 1.05742e+07 0.00518614 1.93933e+07 49.8549 0.0166222 0.989377 0 50.2693 GTEX-1399U-0004-SM-5HJQ5 B1 Blood Whole Blood 0013756 -115 BP-43226 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-1399U-0005-SM-5NQ8K B1 8.7 Blood Whole Blood 0013756 -115 BP-43227 RNA isolation_PAXgene Blood RNA (Manual) 09/06/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.989369 472520 0.964187 0.991279 0.814926 17432 1 76 0.00250638 113 0 6.31146e+07 0.035278 237636 6.36698e+07 5.1838e+06 17442 3.14267e+07 0 0.149261 0.991279 0.80782 6.31146e+07 0.00337127 1.38783e+07 3.2907e+07 1.40634e+07 130 1.40789e+07 1.35152e+07 0.00293799 1.39899e+07 49.8414 0.00373232 0.99319 0 50.3313 GTEX-1399U-0008-SM-5S2VE B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 362 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993697 440042 0.976294 0.995503 0.875465 19754 1 76 0.00157536 217 0 8.72934e+07 0.0234162 200885 8.76878e+07 8.07654e+06 19765 4.34998e+07 0 0.100829 0.995503 0.871528 8.72934e+07 0.00246992 1.94133e+07 1.48838e+07 1.96004e+07 238 1.96118e+07 2.23113e+07 0.00202183 1.95639e+07 49.9389 0.00229091 0.997308 0 50.2399 GTEX-1399U-0226-SM-5P9J2 1 B1 2 pieces, medulla visible (delineated)--valuable specimen. Trace fat, rep. delineated by interrupted line 9.3 Adrenal Gland Adrenal Gland 0002369 136 754 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99345 215790 0.977565 0.993906 0.841497 23454 1 76 0.00310985 272 0 1.07119e+08 0.0220494 1.75895e+06 1.07775e+08 3.5711e+06 23478 5.3391e+07 0 0.136068 0.993906 0.836369 1.07119e+08 0.00326866 2.37464e+07 1.41212e+07 2.38924e+07 299 2.37912e+07 1.86586e+07 0.00318922 2.38927e+07 50.1064 0.0163205 0.994363 0 50.1533 GTEX-1399U-0326-SM-5P9G5 1 B1 2 pieces, no significant abnormality 7.2 Thyroid Thyroid 0002046 140 750 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991705 284964 0.965955 0.991734 0.741147 25584 1 76 0.00296351 276 0 1.26217e+08 0.0337638 471915 1.27269e+08 4.45456e+06 25647 6.28397e+07 0 0.224808 0.991734 0.73502 1.26217e+08 0.00349633 2.76158e+07 1.4336e+07 2.77697e+07 330 2.76746e+07 1.93406e+07 0.00322991 2.77186e+07 50.0397 0.00370802 0.991763 0 50.139 GTEX-1399U-0426-SM-5K7UU 1 B1 6 pieces. trace adherent serosal fat, delineated 6.2 Blood Vessel Artery - Aorta 0001496 145 745 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986386 257015 0.974223 0.988588 0.835752 23151 1 76 0.00431307 214 0 1.00259e+08 0.0253564 339995 1.01417e+08 6.37478e+06 23175 4.98191e+07 0 0.138471 0.988588 0.826215 1.00259e+08 0.00504415 2.16646e+07 8.5749e+06 2.1795e+07 229 2.17987e+07 1.90972e+07 0.0046778 2.1879e+07 50.0919 0.00335246 0.990791 0 50.1499 GTEX-1399U-0526-SM-5K7YM 1 B1 2 pieces, no significant ischemic damage, trace fat, delineated 8 Heart Heart - Left Ventricle 0006566 162 728 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991775 122858 0.98512 0.9939 0.857349 19876 1 76 0.00252449 152 0 6.85453e+07 0.0146245 1.71292e+06 6.8966e+07 1.25384e+07 19885 3.41512e+07 0 0.127771 0.9939 0.85212 6.85453e+07 0.00357257 1.52476e+07 1.85215e+07 1.47574e+07 202 1.46828e+07 1.05954e+07 0.00304741 1.54575e+07 51.2852 0.0248371 0.996025 0 49.1831 GTEX-1399U-0626-SM-5J1NZ 1 B1 2 pieces, subtotally occlusive calcifed atherosis, encircled. Adherent fat up to ~1.5mm, delineated 6.6 Blood Vessel Artery - Coronary 0001621 159 731 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98779 341501 0.973887 0.98951 0.848987 23632 1 76 0.00398589 273 0 1.0046e+08 0.0257889 406845 1.01525e+08 5.79352e+06 23653 4.99094e+07 0 0.1249 0.98951 0.840081 1.0046e+08 0.00488963 2.18026e+07 9.35189e+06 2.19282e+07 266 2.18462e+07 1.81254e+07 0.00443697 2.20612e+07 50.2448 0.00400734 0.99123 0 50.1436 GTEX-1399U-0726-SM-5KM1D 1 B1 2 pieces, no abnormalties 8.2 Heart Heart - Atrial Appendage 0006631 169 721 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987808 146734 0.981663 0.990206 0.836664 21445 1 76 0.00373934 197 0 7.91112e+07 0.0178807 1.93327e+06 7.98937e+07 3.87492e+06 21459 3.93514e+07 0 0.144999 0.990206 0.82847 7.91112e+07 0.00471883 1.68864e+07 1.96415e+07 1.70611e+07 238 1.69038e+07 1.10934e+07 0.0042279 1.71962e+07 50.4287 0.024198 0.992604 0 50.2573 GTEX-1399U-0826-SM-5KM1P 1 B1 2 pieces, moderate congestion, abundant hemosiderin laden macrophages 7.3 Lung Lung 0008952 177 713 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987114 217712 0.969833 0.98966 0.772063 25889 1 76 0.00395939 274 0 1.11755e+08 0.0298575 689295 1.12922e+08 5.19614e+06 25940 5.55603e+07 0 0.19777 0.98966 0.76408 1.11755e+08 0.00505005 2.45243e+07 1.11388e+07 2.48063e+07 309 2.47424e+07 1.61184e+07 0.00450332 2.4856e+07 50.1145 0.00610415 0.992207 0 50.2859 GTEX-1399U-0926-SM-5IFHA 1 B1 2 pieces, well preserved, minimal fat; Islets well visualized, rep encircled 7.7 Pancreas Pancreas 0001150 183 707 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990098 273263 0.976443 0.993055 0.832585 22372 1 76 0.00230692 113 0 7.31498e+07 0.0232267 188722 7.36613e+07 8.1189e+06 22395 3.63687e+07 0 0.143858 0.993055 0.826803 7.31498e+07 0.00404372 1.66616e+07 1.74572e+07 1.67967e+07 120 1.67918e+07 2.00962e+07 0.00317273 1.68867e+07 50.1409 0.00256202 0.996013 0 50.2019 GTEX-1399U-1026-SM-5J1OC 1 B1 6 pieces, squamous mucosa is ~0.5mm, ~15/20% thickness 9 Esophagus Esophagus - Mucosa 0006920 199 691 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988598 309430 0.976695 0.990734 0.837302 23544 1 76 0.00402342 210 0 9.45391e+07 0.0228954 372842 9.54232e+07 5.06213e+06 23565 4.7021e+07 0 0.139393 0.990734 0.829544 9.45391e+07 0.00474632 2.11851e+07 1.20928e+07 2.1314e+07 209 2.1347e+07 1.96664e+07 0.00438409 2.13516e+07 50.0055 0.00390725 0.992871 0 50.1517 GTEX-1399U-1126-SM-5L3DB 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~60 microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 198 692 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987246 200013 0.972176 0.99133 0.794943 22474 1 76 0.00315505 183 0 7.16187e+07 0.0276118 681581 7.2245e+07 7.61085e+06 22493 3.55831e+07 0 0.177233 0.99133 0.788051 7.16187e+07 0.0042517 1.56895e+07 8.48776e+06 1.57601e+07 168 1.5785e+07 1.12294e+07 0.00370112 1.5935e+07 50.2365 0.0094343 0.995414 0 50.1123 GTEX-1399U-1226-SM-5K7XT 1 B1 6 pieces, all muscularis, good specimens 6.8 Esophagus Esophagus - Muscularis 0004648 200 690 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990639 127687 0.976959 0.992956 0.844609 21732 1 76 0.00257251 142 0 6.59405e+07 0.0227513 631723 6.64082e+07 1.24369e+07 21745 3.28332e+07 0 0.13235 0.992956 0.83866 6.59405e+07 0.0036321 1.43171e+07 6.79849e+06 1.43236e+07 160 1.42972e+07 1.1726e+07 0.00310106 1.44924e+07 50.3389 0.00951272 0.995274 0 50.0114 GTEX-1399U-1326-SM-5IJET 1 B1 2 pieces, all myometrium; no endometrial elements noted 6.2 Uterus Uterus 0000995 203 687 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986398 274727 0.971835 0.988557 0.811898 23418 1 76 0.0046534 161 0 7.84879e+07 0.0278836 239798 7.93964e+07 5.07539e+06 23443 3.89812e+07 0 0.159937 0.988557 0.802608 7.84879e+07 0.00520889 1.71371e+07 7.40921e+06 1.72988e+07 167 1.72692e+07 1.40934e+07 0.00493054 1.73352e+07 50.0954 0.00302026 0.990716 0 50.2349 GTEX-1399U-1326-SM-DK2JO 1 B1 2 pieces, all myometrium; no endometrial elements noted Uterus Uterus 0000995 203 687 BP-51510 DNA Extraction from Paxgene-derived Lysate Plate Based 04/11/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1399U-1426-SM-5J1N8 1 B1 6 pieces, all muscularis, good specimens 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 205 685 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990887 143718 0.977578 0.992443 0.860405 21668 1 76 0.00382511 218 0 8.52754e+07 0.0221416 929830 8.59247e+07 4.34024e+06 21681 4.24499e+07 0 0.117173 0.992443 0.853903 8.52754e+07 0.00438431 1.84006e+07 7.35805e+06 1.85161e+07 227 1.84332e+07 1.55736e+07 0.00410427 1.86089e+07 50.2371 0.0108215 0.994 0 50.1565 GTEX-1399U-1526-SM-5J2N7 1 B1 6 pieces, squamous mucosa up to~130 microns 6.9 Vagina Vagina 0000996 211 679 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984892 147263 0.97394 0.988605 0.802621 23585 1 76 0.00445641 133 0 6.75744e+07 0.0257026 195706 6.83533e+07 3.79113e+06 23611 3.35642e+07 0 0.171318 0.988605 0.793475 6.75744e+07 0.00603817 1.49872e+07 7.7282e+06 1.50709e+07 133 1.51467e+07 1.27933e+07 0.00524432 1.5147e+07 50.0005 0.00286315 0.992318 0 50.1391 GTEX-1399U-1626-SM-5P9J3 1 B1 6 pieces, mucosa well-preserved, up to 1mm, ~20-30% thickness 7.3 Stomach Stomach 0000945 211 679 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.989276 149526 0.976006 0.989769 0.841418 22919 1 76 0.00307812 276 0 8.9296e+07 0.0237305 703960 9.0219e+07 3.02945e+06 22938 4.45049e+07 0 0.134588 0.989769 0.832809 8.9296e+07 0.003296 1.95219e+07 8.13681e+06 1.96611e+07 268 1.95398e+07 1.52958e+07 0.00318701 1.96849e+07 50.1851 0.00780279 0.990261 0 50.1777 GTEX-1399U-1726-SM-5P9J4 1 B1 2 pieces, typical post menopausal atrophy 8.3 Ovary Ovary 0000992 212 678 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992676 244461 0.971379 0.993237 0.802665 24861 1 76 0.00313292 278 0 9.93794e+07 0.0282535 320199 1.00056e+08 3.22155e+06 24897 4.94997e+07 0 0.168714 0.993237 0.797236 9.93794e+07 0.00346174 2.17908e+07 8.5212e+06 2.19201e+07 277 2.18373e+07 1.8356e+07 0.00329724 2.19312e+07 50.1072 0.00320019 0.993798 0 50.1479 GTEX-1399U-1826-SM-5PNZ1 1 B1 2 pieces, ductal lobular elements well-represented, delineated; lobular hyperplasia/atypical hyperplasia noted focally, ensquared 8 Breast Breast - Mammary Tissue 0008367 225 665 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990888 242131 0.976498 0.991877 0.835433 24437 1 76 0.00320614 279 0 9.83403e+07 0.0227855 528254 9.91457e+07 2.91894e+06 24467 4.8949e+07 0 0.141065 0.991877 0.828647 9.83403e+07 0.00377727 2.16716e+07 9.35605e+06 2.19588e+07 258 2.18431e+07 1.91185e+07 0.00349142 2.18881e+07 50.0515 0.00532806 0.992866 0 50.3291 GTEX-1399U-1926-SM-5IFH7 1 B1 6 pieces, mucosa well preserved, up to 0.5mm, 15-20% thickness 5.9 Colon Colon - Transverse 0001157 217 673 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988464 259680 0.973162 0.991431 0.816501 22903 1 76 0.00260237 170 0 7.45584e+07 0.0257744 1.17264e+06 7.52028e+07 8.6038e+06 22932 3.70469e+07 0 0.15666 0.991431 0.809505 7.45584e+07 0.00408084 1.65031e+07 1.25613e+07 1.65974e+07 200 1.65642e+07 1.03908e+07 0.00333939 1.67387e+07 50.262 0.015593 0.994398 0 50.1426 GTEX-1399U-1926-SM-DLIQQ 1 B1 6 pieces, mucosa well preserved, up to 0.5mm, 15-20% thickness Colon Colon - Transverse 0001157 217 673 BP-51510 DNA Extraction from Paxgene-derived Lysate Plate Based 04/11/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1399U-2026-SM-9WPNN 1 B1 2 pieces, mesothelial fibrosis/fascia ~10% total, rep delineated 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 214 676 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98891 177016 0.979838 0.990452 0.853877 21783 1 76 0.00608104 165 0 7.78437e+07 0.0199426 1.02553e+06 7.85942e+07 1.16923e+07 21793 3.87848e+07 0 0.125961 0.990452 0.845724 7.78437e+07 0.0066507 1.72517e+07 1.02392e+07 1.73843e+07 197 1.73717e+07 1.22549e+07 0.00636543 1.73699e+07 49.9974 0.0130485 0.991993 0 50.1914 GTEX-1399U-2126-SM-5IFEZ 2 B1 4 pieces, lymphoid aggregates ~10-15% total 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 227 663 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.98972 233081 0.965189 0.992256 0.739141 25703 1 76 0.00250928 209 0 9.36105e+07 0.0342799 376073 9.43411e+07 1.02942e+07 25755 4.65691e+07 0 0.226048 0.992256 0.733417 9.36105e+07 0.0037421 2.05665e+07 1.17033e+07 2.06901e+07 244 2.06976e+07 1.42721e+07 0.00312411 2.07836e+07 50.1037 0.00398631 0.994792 0 50.1499 GTEX-1399U-2226-SM-5KLZI 1 B1 6 pieces, adherent fat/serosa on several sections up to ~0.7mm, rep delineated 6.5 Colon Colon - Sigmoid 0001159 217 673 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987282 127931 0.979202 0.990029 0.881181 21954 1 76 0.00373504 199 0 8.06151e+07 0.020554 792569 8.1427e+07 4.06871e+06 21964 4.0078e+07 0 0.098021 0.990029 0.872395 8.06151e+07 0.00512172 1.7485e+07 8.56959e+06 1.77155e+07 203 1.76683e+07 1.53138e+07 0.00442645 1.77415e+07 50.1034 0.0097335 0.992777 0 50.3274 GTEX-1399U-2326-SM-5K7WY 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 362 528 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.986538 222287 0.973427 0.989453 0.871642 20963 1 76 0.00275369 157 0 6.287e+07 0.0263555 778351 6.35401e+07 1.15413e+07 20976 3.12745e+07 0 0.101784 0.989453 0.862449 6.287e+07 0.00431765 1.38674e+07 1.27709e+07 1.38345e+07 167 1.38006e+07 1.08385e+07 0.00353337 1.40842e+07 50.5084 0.0122498 0.992369 0 49.9407 GTEX-1399U-2426-SM-5K7XB 0 B1 2 pieces ~10% fibrofascial tissue 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 358 532 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989769 180503 0.979341 0.992457 0.868618 21187 1 76 0.00258768 160 0 6.80561e+07 0.0203657 447770 6.85733e+07 1.26924e+07 21201 3.38689e+07 0 0.110723 0.992457 0.862066 6.80561e+07 0.00415044 1.48778e+07 8.34361e+06 1.50005e+07 171 1.49843e+07 1.30482e+07 0.00336695 1.50723e+07 50.1463 0.0065298 0.995144 0 50.2052 GTEX-1399U-2526-SM-5L3DL 0 B1 2 pieces, minimal interstitial fat 7.5 Muscle Muscle - Skeletal 0011907 365 525 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988374 222439 0.982928 0.992136 0.863228 19453 1 76 0.00296478 274 0 8.86506e+07 0.0168935 1.16427e+06 8.93533e+07 9.61337e+06 19458 4.4088e+07 0 0.1197 0.992136 0.85644 8.86506e+07 0.00378722 1.92664e+07 1.87597e+07 1.92272e+07 272 1.91633e+07 1.56078e+07 0.00337444 1.96282e+07 50.5991 0.0130299 0.995899 0 49.9491 GTEX-1399U-2626-SM-9YFKU 0 B1 2 pieces, focal adherent fat but generally clean specimens 6.6 Nerve Nerve - Tibial 0001323 356 534 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992761 189412 0.967786 0.994293 0.790706 22656 1 76 0.00239967 136 0 5.91135e+07 0.031999 306264 5.94528e+07 2.07987e+06 22682 2.94492e+07 0 0.177081 0.994293 0.786193 5.91135e+07 0.0036781 1.29497e+07 5.47475e+06 1.30807e+07 150 1.30465e+07 8.87306e+06 0.0030379 1.30713e+07 50.0474 0.00515138 0.995825 0 50.2516 GTEX-1399U-2726-SM-9YFKV 0 B1 2 pieces, clean specimens 6.5 Blood Vessel Artery - Tibial 0007610 355 535 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.993569 192279 0.973796 0.995064 0.863366 20967 1 76 0.0022879 210 0 8.36929e+07 0.0259408 517481 8.4108e+07 4.89582e+06 20979 4.16941e+07 0 0.11043 0.995064 0.859105 8.36929e+07 0.00344234 1.78331e+07 6.412e+06 1.79951e+07 243 1.7893e+07 1.45054e+07 0.00286425 1.80608e+07 50.2334 0.00615258 0.996559 0 50.2262 GTEX-1399U-5001-SM-AN3YA B1 Heart Heart - Left Ventricle 0006566 164 ChIP-Seq GTEX-139D8-0001-SM-5GYBZ C1 Blood Whole Blood 0013756 370 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-139D8-0001-SM-7DROC C1 Blood Whole Blood 0013756 370 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-139D8-0006-SM-5LZX8 C1 9.1 Blood Whole Blood 0013756 370 BP-43530 RNA isolation_PAXgene Blood RNA (Manual) 09/13/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.987487 277716 0.978155 0.98852 0.785332 19141 1 76 0.00392134 109 0 6.4922e+07 0.0200461 199739 6.5676e+07 3.55297e+06 19147 3.22511e+07 0 0.192823 0.98852 0.776316 6.4922e+07 0.00446487 1.49614e+07 5.37901e+07 1.50985e+07 114 1.51455e+07 1.45402e+07 0.00419282 1.4991e+07 49.7437 0.00304128 0.989554 0 50.228 GTEX-139D8-0008-SM-5ZZUH C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 418 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995173 465144 0.976136 0.996231 0.860776 20120 1 76 0.001662 190 0 8.17477e+07 0.0235105 260971 8.20569e+07 7.85243e+06 20132 4.07686e+07 0 0.11536 0.996231 0.857532 8.17477e+07 0.00260201 1.8329e+07 1.40529e+07 1.83347e+07 185 1.83331e+07 2.17384e+07 0.00213151 1.8424e+07 50.1236 0.00318037 0.99729 0 50.0077 GTEX-139D8-0226-SM-5KLZO 0 C1 6 pieces; 10% intradermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 417 1003 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987488 168146 0.97456 0.989691 0.811936 23451 1 76 0.00375628 195 0 8.27903e+07 0.0252231 401981 8.36527e+07 3.71404e+06 23480 4.11787e+07 0 0.162624 0.989691 0.803565 8.27903e+07 0.00483008 1.80081e+07 8.43804e+06 1.81232e+07 200 1.81368e+07 1.41951e+07 0.00429198 1.81689e+07 50.0442 0.00480535 0.991893 0 50.1592 GTEX-139D8-0326-SM-5IJCJ 0 C1 2 pieces 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 420 1000 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990419 206147 0.979165 0.992896 0.802609 22767 1 76 0.00218924 173 0 8.32238e+07 0.0204231 461504 8.38192e+07 1.02696e+07 22802 4.13967e+07 0 0.176556 0.992896 0.796907 8.32238e+07 0.00386002 1.83609e+07 7.69976e+06 1.84221e+07 198 1.8442e+07 1.51783e+07 0.00302255 1.85409e+07 50.1338 0.00550595 0.995374 0 50.0833 GTEX-139D8-0726-SM-5P9GJ 1 C1 2 pieces 8 Muscle Muscle - Skeletal 0011907 427 995 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99208 286354 0.975608 0.992322 0.845262 21895 1 76 0.00266565 391 0 1.08669e+08 0.0241786 2.22032e+06 1.09509e+08 3.60642e+06 21912 5.41283e+07 0 0.130345 0.992322 0.838773 1.08669e+08 0.00333509 2.37371e+07 1.2783e+07 2.40294e+07 343 2.39264e+07 1.99206e+07 0.00300029 2.3866e+07 49.9368 0.0202751 0.992565 0 50.3059 GTEX-139D8-1126-SM-5LU8W 1 C1 6 pieces; well trimmed; edematous dermis 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 436 989 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991113 280399 0.977743 0.992942 0.795131 22664 1 76 0.00449108 165 0 6.96061e+07 0.0219753 433807 7.01009e+07 5.80914e+06 22686 3.46262e+07 0 0.182612 0.992942 0.789518 6.96061e+07 0.00369015 1.51825e+07 7.9098e+06 1.52741e+07 151 1.52846e+07 1.21534e+07 0.00409135 1.52969e+07 50.0202 0.00618832 0.994771 0 50.1504 GTEX-139D8-1226-SM-5L3ED 1 C1 6 pieces; no plaques; well trimmed 6.9 Blood Vessel Artery - Aorta 0001496 438 988 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985036 174414 0.974276 0.988893 0.7995 21246 1 76 0.00324474 138 0 6.52309e+07 0.0253752 176406 6.59636e+07 5.86261e+06 21264 3.23957e+07 0 0.174776 0.988893 0.79062 6.52309e+07 0.00428607 1.41458e+07 9.08518e+06 1.41937e+07 144 1.42538e+07 1.19782e+07 0.00376337 1.43216e+07 50.1187 0.0026743 0.992751 0 50.0845 GTEX-139D8-1426-SM-5IJEX 1 C1 6 pieces; well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 443 984 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.9839 266570 0.968925 0.986079 0.787329 23749 1 76 0.00473816 169 0 8.86226e+07 0.0308684 650965 8.98738e+07 6.27583e+06 23782 4.39886e+07 0 0.181596 0.986079 0.776368 8.86226e+07 0.0053155 1.92226e+07 8.73538e+06 1.93496e+07 202 1.93344e+07 1.3003e+07 0.0050262 1.94261e+07 50.1183 0.0072431 0.988257 0 50.1647 GTEX-139D8-1626-SM-5IJFZ 1 C1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 446 983 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98758 196739 0.975141 0.989195 0.793417 24677 1 76 0.00468819 282 0 1.03484e+08 0.024521 757911 1.04615e+08 6.77212e+06 24716 5.14688e+07 0 0.181724 0.989195 0.784844 1.03484e+08 0.00474383 2.28423e+07 1.39425e+07 2.29776e+07 260 2.30079e+07 1.9691e+07 0.00471596 2.29763e+07 49.9657 0.00724478 0.990811 0 50.1477 GTEX-139D8-2326-SM-5IFGE 2 C1 6 pieces; mucosa moderately to severely autolyzed; well dissected 6.2 Stomach Stomach 0000945 463 971 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988096 171481 0.971042 0.990765 0.774643 23666 1 76 0.00229585 179 0 6.59228e+07 0.0287738 538242 6.65373e+07 7.24221e+06 23696 3.27652e+07 0 0.196399 0.990765 0.767489 6.59228e+07 0.00397359 1.46486e+07 1.80168e+07 1.47655e+07 172 1.4747e+07 9.83925e+06 0.00313246 1.48398e+07 50.157 0.00808933 0.993433 0 50.1986 GTEX-139D8-2426-SM-5KM3A 1 C1 2 pieces; ova and corpora identified 6.8 Ovary Ovary 0000992 465 970 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988576 266103 0.965336 0.990489 0.698737 22166 1 76 0.0033308 126 0 6.23319e+07 0.0344501 88907 6.29305e+07 3.87281e+06 22201 3.09884e+07 0 0.266598 0.990489 0.692091 6.23319e+07 0.00429887 1.36947e+07 1.00713e+07 1.38223e+07 124 1.38312e+07 9.69993e+06 0.0038139 1.38061e+07 49.9546 0.00141278 0.992401 0 50.2318 GTEX-139D8-2526-SM-5N9G3 1 C1 2 pieces; only myometrium, no endometrium 5.7 Uterus Uterus 0000995 468 967 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988721 383755 0.959722 0.989815 0.740247 24060 1 76 0.00398184 274 0 9.62684e+07 0.0400651 296916 9.72591e+07 4.36626e+06 24090 4.78318e+07 0 0.219475 0.989815 0.732707 9.62684e+07 0.00395196 2.08355e+07 1.37059e+07 2.09599e+07 266 2.08665e+07 1.21425e+07 0.00396692 2.1038e+07 50.2047 0.00305284 0.990909 0 50.1488 GTEX-139D8-2926-SM-5IJBM 1 C1 6 pieces; 10% to 30% submucosal fat present 6.4 Colon Colon - Sigmoid 0001159 474 964 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988784 173148 0.969 0.991859 0.779055 22745 1 76 0.00225169 136 0 6.17987e+07 0.0307806 281162 6.2306e+07 7.93524e+06 22760 3.07073e+07 0 0.189945 0.991859 0.772712 6.17987e+07 0.00425582 1.34479e+07 6.54213e+06 1.35332e+07 146 1.35126e+07 9.84863e+06 0.00325065 1.36526e+07 50.2577 0.0045126 0.994934 0 50.1581 GTEX-139T4-0008-SM-5S2WF B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1355 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.994437 338013 0.981124 0.995719 0.866722 21160 1 76 0.00161094 289 0 1.02391e+08 0.0185783 357104 1.02831e+08 9.34768e+06 21178 5.10444e+07 0 0.114403 0.995719 0.863012 1.02391e+08 0.00232832 2.3015e+07 1.16037e+07 2.30835e+07 276 2.3065e+07 2.6462e+07 0.00196917 2.31683e+07 50.1118 0.00347272 0.997002 0 50.0742 GTEX-139T4-0011-R9b-SM-5HL6S B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1330 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.9918 449533 0.958242 0.994034 0.826908 22217 1 76 0.00211565 179 0 6.31232e+07 0.0414624 2.30797e+06 6.35021e+07 6.98505e+06 22236 3.1408e+07 0 0.131334 0.994034 0.821975 6.31232e+07 0.00310821 1.39e+07 1.31488e+07 1.42012e+07 176 1.40492e+07 8.33676e+06 0.00261081 1.41848e+07 50.2402 0.0363448 0.996268 0 50.5359 GTEX-139T4-0126-SM-5HL5G 0 B1 2 pieces; 1 piece has 10% fibrous tissue 7 Adipose Tissue Adipose - Subcutaneous 0002190 1350 1240 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991516 250565 0.975646 0.993463 0.801746 23136 1 76 0.00214717 168 0 7.28217e+07 0.0240334 293454 7.33009e+07 7.83243e+06 23162 3.62493e+07 0 0.1739 0.993463 0.796505 7.28217e+07 0.00309243 1.59944e+07 7.59055e+06 1.61108e+07 170 1.60933e+07 1.34027e+07 0.00261887 1.6152e+07 50.0909 0.00400342 0.99541 0 50.1814 GTEX-139T4-0226-SM-5HL5S 1 B1 6 pieces; all have up to 1 mm subcutaneous fat; 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1352 1238 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989339 203930 0.966792 0.991771 0.723709 24232 1 76 0.0023065 128 0 5.95349e+07 0.0330019 355639 6.00289e+07 6.64917e+06 24270 2.96106e+07 0 0.243083 0.991771 0.717754 5.95349e+07 0.00353158 1.30552e+07 6.18062e+06 1.31576e+07 132 1.31452e+07 8.46466e+06 0.00291754 1.3208e+07 50.1192 0.00592446 0.994204 0 50.1954 GTEX-139T4-0326-SM-5K7XN 0 B1 2 pieces; marked atrophy with fibrous replacement & 60% and 30% internal fat (consistent with paraplegia) 6.8 Muscle Muscle - Skeletal 0011907 1355 1235 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988649 204112 0.969705 0.991547 0.77603 23610 1 76 0.00269827 214 0 9.2831e+07 0.0300805 1.55523e+06 9.36223e+07 1.76373e+07 23641 4.61827e+07 0 0.193675 0.991547 0.769471 9.2831e+07 0.00399118 2.02886e+07 1.08903e+07 2.03728e+07 240 2.03414e+07 1.36626e+07 0.00334283 2.05732e+07 50.2832 0.0166118 0.994446 0 50.1035 GTEX-139T4-0426-SM-5J1OQ 1 B1 2 pieces 6 Nerve Nerve - Tibial 0001323 1361 1229 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986458 214250 0.970096 0.98817 0.737104 24691 1 76 0.0041469 180 0 9.14596e+07 0.0295809 277763 9.25545e+07 5.23697e+06 24744 4.5426e+07 0 0.232992 0.98817 0.728384 9.14596e+07 0.00495008 2.01703e+07 8.4104e+06 2.01925e+07 197 2.02231e+07 1.35305e+07 0.0045478 2.02975e+07 50.0918 0.00300107 0.989882 0 50.0275 GTEX-139T4-0426-SM-DK2JW 1 B1 2 pieces Nerve Nerve - Tibial 0001323 1361 1229 BP-52046 DNA Extraction from Paxgene-derived Lysate Plate Based 04/25/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139T4-0426-SM-DLIOF 1 B1 2 pieces Nerve Nerve - Tibial 0001323 1361 1229 BP-52046 DNA Extraction from Paxgene-derived Lysate Plate Based 04/25/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-139T4-0826-SM-5N9GF 2 B1 1 piece; anterior 5.7 Pituitary Pituitary 0000007 1430 1160 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987391 483663 0.958288 0.988784 0.793748 24807 1 76 0.00418562 268 0 9.04858e+07 0.0415381 1.92354e+06 9.15122e+07 5.00857e+06 24843 4.49268e+07 0 0.164541 0.988784 0.784845 9.04858e+07 0.00441168 1.94726e+07 1.63774e+07 1.96133e+07 257 1.95798e+07 1.07531e+07 0.00429849 1.96317e+07 50.0662 0.0210195 0.990177 0 50.1799 GTEX-139T6-0004-SM-5HJQN B1 Blood Whole Blood 0013756 -84 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139T6-0006-SM-5LU92 B1 9.6 Blood Whole Blood 0013756 -84 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.984596 498538 0.969056 0.98664 0.811013 18551 1 76 0.00454503 103 0 6.58357e+07 0.0304342 134226 6.67271e+07 5.93496e+06 18556 3.27355e+07 0 0.158043 0.98664 0.800178 6.58357e+07 0.00388657 1.4822e+07 5.14097e+07 1.49503e+07 115 1.49862e+07 1.53477e+07 0.00421648 1.49293e+07 49.9048 0.00201157 0.988685 0 50.2155 GTEX-139T6-0226-SM-5IFGZ 1 B1 2 pieces, moderate congestion 7.3 Spleen Spleen 0002106 135 661 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990125 292282 0.963039 0.992683 0.74942 24337 1 76 0.00240448 156 0 7.58118e+07 0.0363804 361437 7.63706e+07 7.76872e+06 24376 3.7694e+07 0 0.213619 0.992683 0.743937 7.58118e+07 0.00371947 1.66217e+07 9.17332e+06 1.67133e+07 173 1.67292e+07 1.11579e+07 0.00306028 1.67933e+07 50.0956 0.00473267 0.995241 0 50.1374 GTEX-139T6-0226-SM-DK2JP 1 B1 2 pieces, moderate congestion Spleen Spleen 0002106 135 661 BP-52855 DNA Extraction from Paxgene-derived Lysate Plate Based 05/16/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139T6-0326-SM-5J2LY 1 B1 2 pieces, no significant abnormalities noted 7.1 Thyroid Thyroid 0002046 138 658 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983249 222490 0.968561 0.987394 0.766148 25233 1 76 0.00426127 274 0 1.0814e+08 0.0311319 339704 1.09521e+08 6.03143e+06 25287 5.36744e+07 0 0.202413 0.987394 0.75649 1.0814e+08 0.0060689 2.36377e+07 1.13998e+07 2.37983e+07 257 2.39217e+07 1.80668e+07 0.00516129 2.3925e+07 50.0034 0.00310173 0.991539 0 50.1693 GTEX-139T6-0426-SM-5IJEM 1 B1 2 pieces patchy acute/hemorrhagic pneumonia and bronchitis/bronchiolities, rep foc delineated 8.1 Lung Lung 0008952 142 654 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98814 280016 0.973874 0.989751 0.802693 25737 1 76 0.00467528 279 0 1.18697e+08 0.025742 375580 1.19926e+08 7.72934e+06 25774 5.90449e+07 0 0.171181 0.989751 0.794467 1.18697e+08 0.00476709 2.63932e+07 1.26853e+07 2.6535e+07 282 2.65606e+07 2.18855e+07 0.00472111 2.65593e+07 49.9987 0.00313175 0.991363 0 50.134 GTEX-139T6-0526-SM-5IJC9 1 B1 2 pieces, minimal (~5%) vascular elements, rep delineated 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 144 652 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990562 145600 0.976967 0.993025 0.844875 21736 1 76 0.00197177 157 0 6.61238e+07 0.0227944 844438 6.65882e+07 8.60781e+06 21752 3.29146e+07 0 0.132092 0.993025 0.838982 6.61238e+07 0.00353033 1.47802e+07 1.01257e+07 1.46231e+07 197 1.45417e+07 9.0781e+06 0.00274912 1.50135e+07 50.7982 0.0126815 0.995488 0 49.7329 GTEX-139T6-0626-SM-5IFF9 1 B1 6 pieces, squamous mucosa 0.4-0.5mm, ~20-25% thickness. Submucosal lymphoid aggregates; rep encircled 9.6 Esophagus Esophagus - Mucosa 0006920 152 644 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988441 260976 0.976335 0.991634 0.830226 23229 1 76 0.00222299 279 0 9.15129e+07 0.023194 485745 9.22849e+07 1.13078e+07 23248 4.55119e+07 0 0.146109 0.991634 0.82328 9.15129e+07 0.00351269 2.05954e+07 1.42513e+07 2.06404e+07 258 2.07059e+07 1.88358e+07 0.00286577 2.08103e+07 50.1257 0.00526354 0.994828 0 50.0546 GTEX-139T6-0726-SM-5PNVK 1 B1 6 pieces, all muscularis, good specimens 7.8 Esophagus Esophagus - Muscularis 0004648 155 641 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993007 161625 0.97677 0.994633 0.841863 20441 1 76 0.00173368 134 0 5.47632e+07 0.0229675 443011 5.50587e+07 5.17212e+06 20451 2.72752e+07 0 0.134907 0.994633 0.837344 5.47632e+07 0.00267752 1.18446e+07 4.76625e+06 1.19008e+07 142 1.18229e+07 9.27146e+06 0.00220483 1.20098e+07 50.3919 0.00804615 0.996259 0 50.1183 GTEX-139T6-0826-SM-5J1O2 1 B1 6 pieces, all muscularis, good specimens 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 158 638 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990241 174861 0.977609 0.991904 0.835428 22554 1 76 0.003765 209 0 8.75107e+07 0.0220996 568743 8.8225e+07 4.74658e+06 22574 4.35456e+07 0 0.142181 0.991904 0.828664 8.75107e+07 0.00442471 1.90733e+07 8.07226e+06 1.92398e+07 239 1.91934e+07 1.4821e+07 0.0040943 1.92588e+07 50.0851 0.0064465 0.993566 0 50.2173 GTEX-139T6-0826-SM-DO3X4 1 B1 6 pieces, all muscularis, good specimens Esophagus Esophagus - Gastroesophageal Junction 0004550 158 638 BP-52046 DNA Extraction from Paxgene-derived Lysate Plate Based 04/25/2014 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-139T6-1026-SM-5IJGC 1 B1 6 pieces, well preserved mucosa, ~20% of specimen is lymphoid/Peyer's aggregates, excellent specimen 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 171 625 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987398 226827 0.973668 0.988979 0.796864 25365 1 76 0.0044762 277 0 1.0555e+08 0.0259657 921335 1.06726e+08 6.67981e+06 25404 5.2477e+07 0 0.176803 0.988979 0.788083 1.0555e+08 0.00474838 2.33837e+07 1.50895e+07 2.35973e+07 288 2.35738e+07 1.64406e+07 0.00461207 2.3576e+07 50.0023 0.00863273 0.99056 0 50.2273 GTEX-139T6-1226-SM-5IFFC 1 B1 2 pieces, seminiferous tubules well-preserved, spermatogenesis is present 6.5 Testis Testis 0000473 177 619 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987966 439587 0.926933 0.991275 0.736299 32899 1 76 0.00215575 216 0 8.63526e+07 0.0727688 1.16582e+06 8.71126e+07 1.04348e+07 32952 4.2945e+07 0 0.190633 0.991275 0.729875 8.63526e+07 0.00362715 1.79957e+07 1.98355e+07 1.80616e+07 207 1.81746e+07 1.36809e+07 0.00288899 1.81396e+07 49.9518 0.0133829 0.994584 0 50.0914 GTEX-139T6-1326-SM-5IFFO 1 B1 6 pieces, mucosa fairly well preserved, ~0.3 mm or ~25-40% thickness 7 Colon Colon - Transverse 0001157 182 614 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987193 237355 0.974054 0.991094 0.794414 23868 1 76 0.00214272 278 0 8.26334e+07 0.0254156 1.42754e+06 8.3376e+07 1.00619e+07 23898 4.10571e+07 0 0.17964 0.991094 0.787339 8.26334e+07 0.00351123 1.82233e+07 1.60359e+07 1.84164e+07 260 1.84459e+07 1.12356e+07 0.00282428 1.84811e+07 50.0478 0.0171217 0.994995 0 50.2636 GTEX-139T6-1426-SM-5P9J7 1 B1 "6 pieces, muscularis with ~ ""contaminant"" mucosa, ~10% total, rep delineated" 8.4 Colon Colon - Sigmoid 0001159 186 610 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.987407 221285 0.976888 0.987852 0.846405 23708 1 76 0.0029939 288 0 1.13894e+08 0.0227589 599511 1.15294e+08 3.88932e+06 23740 5.67492e+07 0 0.130483 0.987852 0.836123 1.13894e+08 0.00315973 2.47985e+07 9.88620e+06 2.50008e+07 314 2.48943e+07 2.15438e+07 0.00307678 2.4953e+07 50.0588 0.00519984 0.988298 0 50.2031 GTEX-139T6-1526-SM-5P9G6 1 B1 2 pieces, glandular hyperplasia pattern, adherent periproastatic connective tissue nubbin (delineated), with ganglion (encircled) 6.7 Prostate Prostate 0002367 191 605 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991022 680034 0.944767 0.991031 0.75016 26279 1 76 0.00285548 374 0 1.17084e+08 0.0549981 775464 1.18144e+08 3.77744e+06 26329 5.82809e+07 0 0.194607 0.991031 0.743432 1.17084e+08 0.00358237 2.50875e+07 4.01826e+07 2.55503e+07 353 2.53993e+07 1.56359e+07 0.00321892 2.52583e+07 49.8609 0.00656374 0.991041 0 50.457 GTEX-139T6-1626-SM-5PNYZ 1 B1 2 pieces, fibroadipose tissue, no ductal elements identified 7.1 Breast Breast - Mammary Tissue 0008367 197 599 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993171 342091 0.971123 0.993593 0.823066 22973 1 76 0.00284833 276 0 9.92018e+07 0.02858 424955 9.98416e+07 2.66858e+06 23005 4.94287e+07 0 0.148057 0.993593 0.817792 9.92018e+07 0.00319289 2.17419e+07 1.45753e+07 2.19988e+07 301 2.18749e+07 1.77241e+07 0.00302054 2.19098e+07 50.0398 0.00425629 0.994015 0 50.2937 GTEX-139T6-1726-SM-5PNZ3 0 B1 2 pieces, adherent ~1mm nubbin of fat, delineated, generally clean specimen 7.5 Nerve Nerve - Tibial 0001323 323 473 BP-47901 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990103 246296 0.969273 0.990663 0.768725 24730 1 76 0.00307487 293 0 1.00693e+08 0.0304288 309516 1.01642e+08 2.93737e+06 24774 5.01306e+07 0 0.200548 0.990663 0.761548 1.00693e+08 0.00351368 2.22075e+07 8.53103e+06 2.23586e+07 262 2.22545e+07 1.68653e+07 0.00329415 2.23684e+07 50.1277 0.00304515 0.991223 0 50.1696 GTEX-139T6-1826-SM-5KM2E 0 B1 2 pieces, no atherosis, minimal adherent fibrous tissue, clean specimen 7.7 Blood Vessel Artery - Tibial 0007610 327 469 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986289 137769 0.976585 0.989015 0.849048 20983 1 76 0.00372059 138 0 6.6581e+07 0.0230201 221458 6.73205e+07 3.23582e+06 20994 3.30834e+07 0 0.127537 0.989015 0.839721 6.6581e+07 0.0049522 1.43655e+07 4.44042e+06 1.45214e+07 151 1.45297e+07 1.29457e+07 0.0043347 1.45312e+07 50.0025 0.00328961 0.99174 0 50.2699 GTEX-139T6-2026-SM-5IFFL 0 B1 2 pieces ~5-10% interstitial fat, delineated2 8.5 Muscle Muscle - Skeletal 0011907 334 462 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989731 273503 0.983327 0.992963 0.865313 20330 1 76 0.00185274 278 0 9.2066e+07 0.0164603 878061 9.27185e+07 1.12389e+07 20340 4.58022e+07 0 0.118014 0.992963 0.859224 9.2066e+07 0.00316313 2.01502e+07 1.58266e+07 2.00307e+07 290 2.01082e+07 1.77236e+07 0.0025058 2.03405e+07 50.2872 0.00947018 0.996194 0 49.8513 GTEX-139T6-2126-SM-5KM37 0 B1 2 pieces, minimal fascia 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 335 461 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989259 187534 0.977787 0.991083 0.809042 22983 1 76 0.00306664 204 0 8.40902e+07 0.021859 451293 8.48467e+07 5.34594e+06 23007 4.18418e+07 0 0.168745 0.991083 0.801828 8.40902e+07 0.00398301 1.86222e+07 8.00379e+06 1.87782e+07 207 1.8773e+07 1.41595e+07 0.00352398 1.87755e+07 50.0034 0.00531892 0.992907 0 50.2086 GTEX-139T6-5016-SM-AN3YQ B1 Muscle Muscle - Skeletal 0011907 331 ChIP-Seq GTEX-139T8-0004-SM-5HJPE C1 Blood Whole Blood 0013756 482 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139T8-0006-SM-5NQ6V C1 8.5 Blood Whole Blood 0013756 482 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.972378 422164 0.975599 0.974069 0.782461 18855 1 76 0.00265618 125 0 8.51027e+07 0.0225066 183705 8.73682e+07 7.42831e+06 18869 4.23123e+07 0 0.193139 0.974069 0.762171 8.51027e+07 0.0036769 1.9556e+07 1.04553e+08 1.98842e+07 149 1.99005e+07 1.96872e+07 0.00316565 1.96966e+07 49.7425 0.00210265 0.975761 0 50.4161 GTEX-139T8-0008-SM-5ZZUD C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 565 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.9949 464512 0.973155 0.996023 0.844697 22832 1 76 0.00174565 182 0 8.22252e+07 0.0265277 481667 8.25535e+07 7.70264e+06 22852 4.10016e+07 0 0.128458 0.996023 0.841338 8.22252e+07 0.0026785 1.83578e+07 1.43478e+07 1.83861e+07 177 1.83593e+07 2.0899e+07 0.00221155 1.84863e+07 50.1723 0.0058346 0.997147 0 50.0385 GTEX-139T8-0011-R1a-SM-5HL75 C1, A1 6.6 Brain Brain - Hippocampus 0001954 487 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989781 404197 0.96744 0.992305 0.849609 20793 1 76 0.00240306 265 0 6.87006e+07 0.0324608 7.92834e+06 6.92334e+07 7.40458e+06 20801 3.41745e+07 0 0.117831 0.992305 0.843071 6.87006e+07 0.00362159 1.51885e+07 2.66485e+07 1.51307e+07 288 1.48372e+07 3.20855e+06 0.00301078 1.56414e+07 51.3194 0.114516 0.994828 0 49.9046 GTEX-139T8-0011-R3b-SM-5HL4R C1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 487 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990345 481100 0.965943 0.993173 0.848916 21672 1 76 0.00228901 205 0 6.94789e+07 0.0338807 7.55946e+06 6.99565e+07 6.78672e+06 21680 3.45375e+07 0 0.117027 0.993173 0.84312 6.94789e+07 0.00368716 1.53859e+07 1.91448e+07 1.53294e+07 242 1.50546e+07 5.90953e+06 0.00298609 1.58448e+07 51.2787 0.10806 0.996 0 49.9081 GTEX-139T8-0011-R4a-SM-5HL54 C1, A1 6.3 Brain Brain - Amygdala 0001876 487 BP-45053 RNA isolation_PAXgene Tissue miRNA 10/25/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991305 450722 0.967771 0.99354 0.852852 22036 1 76 0.00228571 199 0 6.99309e+07 0.0320413 7.56608e+06 7.03856e+07 6.65044e+06 22048 3.48012e+07 0 0.114919 0.99354 0.847342 6.99309e+07 0.00340478 1.52183e+07 2.06444e+07 1.57125e+07 248 1.5425e+07 6.15398e+06 0.00284399 1.56441e+07 50.3526 0.107495 0.995774 0 50.7989 GTEX-139T8-0011-R5b-SM-5J1MO C1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 487 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.985696 492769 0.965108 0.987971 0.843597 22662 1 76 0.00423953 369 0 9.61127e+07 0.0347741 1.14417e+07 9.72829e+07 5.77011e+06 22672 4.77601e+07 0 0.121511 0.987971 0.83345 9.61127e+07 0.00513882 2.07996e+07 3.22654e+07 2.13566e+07 367 2.08236e+07 7.10102e+06 0.00468814 2.1513e+07 50.8142 0.117612 0.990246 0 50.6606 GTEX-139T8-0126-SM-5K7XZ 0 C1 6 pieces, edematous dermis, atrophic squamous epithelium (~15-20 microns) 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 574 596 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989515 107033 0.974627 0.991917 0.809536 22332 1 76 0.00266951 145 0 5.42467e+07 0.0251625 397165 5.46888e+07 8.24139e+06 22349 2.69988e+07 0 0.16509 0.991917 0.802993 5.42467e+07 0.00397891 1.19696e+07 5.88927e+06 1.19547e+07 131 1.19473e+07 9.14567e+06 0.00332262 1.21032e+07 50.3242 0.00726227 0.994318 0 49.9688 GTEX-139T8-0226-SM-5L3EA 0 C1 2 pieces, ~10% fibro-fascial tissue 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 576 594 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985312 242134 0.975806 0.989335 0.794133 22962 1 76 0.00317057 165 0 7.78911e+07 0.0238852 563760 7.87308e+07 7.57517e+06 22986 3.8696e+07 0 0.181674 0.989335 0.785664 7.78911e+07 0.00412156 1.72086e+07 8.12416e+06 1.7215e+07 173 1.72915e+07 1.35197e+07 0.00364413 1.74219e+07 50.1878 0.00716061 0.993359 0 50.0093 GTEX-139T8-0326-SM-5IJCM 0 C1 2 pieces, trace adherent fat up to ~0.5mm, delineated 6.3 Nerve Nerve - Tibial 0001323 590 581 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987892 153841 0.968972 0.990262 0.747526 22771 1 76 0.00232462 144 0 5.73038e+07 0.0307613 301533 5.78673e+07 6.62369e+06 22799 2.84884e+07 0 0.221446 0.990262 0.740247 5.73038e+07 0.00406798 1.26204e+07 5.81355e+06 1.26597e+07 132 1.26315e+07 8.80816e+06 0.00319421 1.27822e+07 50.2965 0.00521077 0.992633 0 50.0778 GTEX-139T8-0426-SM-5K7VC 0 C1 2 pieces, minimal-absent atherosis, Monckeberg's medial sclerosis, delineated (rep) 8 Blood Vessel Artery - Tibial 0007610 591 580 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984984 247192 0.975221 0.987596 0.823616 21528 1 76 0.00440033 169 0 8.40146e+07 0.0243544 255385 8.50698e+07 5.78706e+06 21547 4.17224e+07 0 0.151605 0.987596 0.8134 8.40146e+07 0.0051286 1.81118e+07 6.46465e+06 1.82798e+07 171 1.8299e+07 1.66148e+07 0.0047635 1.83065e+07 50.0103 0.00300206 0.990207 0 50.2308 GTEX-139T8-0526-SM-5KLZL 0 C1 2 pieces, '10% interstitial fat, rep. foci delineated 8.2 Muscle Muscle - Skeletal 0011907 600 572 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988525 152290 0.978975 0.990783 0.832395 20914 1 76 0.00369921 142 0 7.6045e+07 0.0207903 831334 7.67524e+07 3.52188e+06 20925 3.78289e+07 0 0.146581 0.990783 0.824723 7.6045e+07 0.00480018 1.64846e+07 7.25636e+06 1.65736e+07 164 1.66196e+07 1.49323e+07 0.00424844 1.65981e+07 49.9675 0.0108314 0.993041 0 50.1347 GTEX-139T8-0626-SM-5KLZX 0 C1 6 pieces, atrophic squamous epithelium (~20-25 microns) 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 627 546 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986333 188867 0.973732 0.988896 0.759149 23349 1 76 0.00392024 157 0 7.24472e+07 0.0260753 345972 7.32607e+07 3.40217e+06 23377 3.60057e+07 0 0.214583 0.988896 0.750719 7.24472e+07 0.00510501 1.59435e+07 7.07224e+06 1.60437e+07 154 1.60628e+07 1.12768e+07 0.00451109 1.61046e+07 50.0651 0.00472248 0.99146 0 50.1567 GTEX-139T8-0726-SM-5L3D2 1 C1 2 pieces, near-total sclerosis/ atrophy of seminiferous tubules, no significant Leydig cell hyperlasia, findings c/w history of cirrhosis 6.8 Testis Testis 0000473 631 542 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 EXCLUDE 0.985319 227563 0.968459 0.989568 0.698057 24415 1 76 0.00344259 140 0 7.45427e+07 0.0312272 772819 7.53285e+07 7.72995e+06 24457 3.69887e+07 0 0.270402 0.989568 0.690775 7.45427e+07 0.00453875 1.64398e+07 7.96188e+06 1.6471e+07 148 1.65644e+07 1.07726e+07 0.00398832 1.66428e+07 50.118 0.0102593 0.993817 0 50.0475 GTEX-139T8-0826-SM-5L3DE 1 C1 2 pieces, gynecomastoid hyperplasia, prominent ducts (rep delineated), focal PASH (pseudoangiomatoid stromal hyperplasia) 7.1 Breast Breast - Mammary Tissue 0008367 645 529 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.964737 234580 0.964893 0.968488 0.702653 24106 1 76 0.00361904 126 0 6.72667e+07 0.0348234 330528 6.94554e+07 6.88923e+06 24145 3.33961e+07 0 0.26224 0.968488 0.680511 6.72667e+07 0.00440223 1.48246e+07 1.11118e+07 1.48451e+07 132 1.49256e+07 1.01894e+07 0.00400912 1.49847e+07 50.0987 0.00475886 0.97224 0 50.0346 GTEX-139T8-0926-SM-EZ6XP 1 C1 4 pieces, no abnormalities; Purkinje cells well visualized Brain Brain - Cerebellum 0002037 669 505 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139T8-1026-SM-5J2MC 1 C1 4 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 671 504 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982721 716485 0.952239 0.986815 0.820127 23829 1 76 0.00450654 269 0 9.24935e+07 0.0474358 6.37509e+06 9.37294e+07 5.19974e+06 23843 4.59095e+07 0 0.132111 0.986815 0.809314 9.24935e+07 0.00626553 1.98243e+07 3.78302e+07 2.01591e+07 284 2.00649e+07 9.60001e+06 0.00538239 2.02598e+07 50.2417 0.068016 0.990908 0 50.4186 GTEX-139TS-0003-SM-5HJR1 B1 Blood Whole Blood 0013756 1075 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139TS-0005-SM-5NQC1 B1 8.2 Blood Whole Blood 0013756 1075 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.985709 359822 0.977636 0.988343 0.760955 19414 1 76 0.00282984 133 0 8.17558e+07 0.0214226 477468 8.272e+07 1.11232e+07 19430 4.06495e+07 0 0.21668 0.988343 0.752085 8.17558e+07 0.00578717 1.84232e+07 5.60046e+07 1.85604e+07 151 1.85548e+07 1.62017e+07 0.00430456 1.86476e+07 50.1247 0.0057721 0.990976 0 50.1855 GTEX-139TS-0008-SM-62LDG B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1303 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990136 483859 0.974876 0.993358 0.85013 21001 1 76 0.00241467 225 0 9.78983e+07 0.0247883 417918 9.85528e+07 6.74987e+06 21018 4.87056e+07 0 0.124746 0.993358 0.844483 9.78983e+07 0.00283138 2.18268e+07 1.65719e+07 2.19426e+07 247 2.19935e+07 2.49147e+07 0.00262235 2.20814e+07 50.0998 0.00424055 0.99658 0 50.1323 GTEX-139TS-0011-R10a-SM-5K7TU B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 1064 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985688 816448 0.962871 0.988385 0.866391 22366 1 76 0.00439401 370 0 9.48173e+07 0.0367906 7.5303e+06 9.59316e+07 6.46914e+06 22376 4.71052e+07 0 0.0964802 0.988385 0.856328 9.48173e+07 0.00516697 2.04716e+07 2.9564e+07 2.09662e+07 347 2.07391e+07 9.89718e+06 0.00477944 2.09412e+07 50.2424 0.0784966 0.991083 0 50.5968 GTEX-139TS-0011-R10a-SM-AHZ6H B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1064 ChIP-Seq GTEX-139TS-0011-R2b-SM-5J1MX B1, A1 6.3 Brain Brain - Substantia nigra 0002038 1064 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988309 566194 0.959779 0.990477 0.819723 23620 1 76 0.0043125 391 0 1.16524e+08 0.0399985 1.04657e+07 1.17645e+08 6.57094e+06 23644 5.7909e+07 0 0.140055 0.990477 0.811918 1.16524e+08 0.00507312 2.53252e+07 2.50168e+07 2.59587e+07 358 2.5461e+07 1.0957e+07 0.00469198 2.60404e+07 50.5625 0.0889599 0.992645 0 50.6176 GTEX-139TS-0011-R5b-SM-5J2MZ B1, A1 6.1 Brain Brain - Caudate (basal ganglia) 0001873 1064 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981648 528131 0.959888 0.98611 0.811456 23819 1 76 0.00455968 195 0 7.94133e+07 0.0399166 5.17282e+06 8.05319e+07 4.42616e+06 23842 3.93826e+07 0 0.148432 0.98611 0.800185 7.94133e+07 0.00650378 1.71446e+07 2.65991e+07 1.74597e+07 221 1.72684e+07 5.97269e+06 0.00552733 1.76452e+07 50.5397 0.0642333 0.990573 0 50.4553 GTEX-139TS-0011-R6a-SM-5J2OB B1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1064 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.980755 1.09763e+06 0.948753 0.985354 0.82547 21449 1 76 0.00476409 368 0 9.88711e+07 0.0511102 1.11889e+07 1.00341e+08 5.72396e+06 21461 4.90381e+07 0 0.123283 0.985354 0.813381 9.88711e+07 0.00660128 2.08458e+07 6.2164e+07 2.14247e+07 354 2.09375e+07 4.8528e+06 0.0056784 2.17089e+07 50.9044 0.111509 0.989954 0 50.6847 GTEX-139TS-0011-R7a-SM-5K7X7 B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 1064 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988758 505796 0.969804 0.991493 0.8331 19771 1 76 0.00290983 366 0 8.30559e+07 0.0301283 1.04032e+07 8.37684e+07 1.43276e+07 19779 4.13501e+07 0 0.136705 0.991493 0.826013 8.30559e+07 0.00442263 1.79287e+07 5.36376e+07 1.78528e+07 352 1.73327e+07 3.50826e+06 0.00366414 1.86528e+07 51.8342 0.12419 0.994229 0 49.894 GTEX-139TS-0011-R8a-SM-5J1NP B1, A1 5.9 Brain Brain - Hypothalamus 0001898 1064 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.981201 684871 0.961535 0.983191 0.870738 21650 1 76 0.0043682 369 0 9.03616e+07 0.0382849 1.19877e+07 9.19065e+07 5.80586e+06 21664 4.48808e+07 0 0.0907968 0.983191 0.856102 9.03616e+07 0.00526265 1.96828e+07 3.10951e+07 2.01815e+07 366 1.99256e+07 6.3734e+06 0.00481452 2.0099e+07 50.2166 0.130434 0.98518 0 50.6255 GTEX-139TS-0126-SM-5K7XJ 1 B1 2 pieces 7.3 Thyroid Thyroid 0002046 1123 1121 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990489 121097 0.973197 0.992786 0.769376 23250 1 76 0.00277406 126 0 6.05695e+07 0.0264418 166259 6.10096e+07 1.17355e+07 23277 3.01419e+07 0 0.203821 0.992786 0.763826 6.05695e+07 0.00382139 1.33662e+07 6.08806e+06 1.34418e+07 132 1.34697e+07 1.03485e+07 0.00329651 1.34709e+07 50.0023 0.00272513 0.995083 0 50.141 GTEX-139TS-0226-SM-5K7W5 1 B1 6 pieces 5.8 Blood Vessel Artery - Aorta 0001496 1130 1114 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.982522 199154 0.976073 0.984855 0.841444 22390 1 76 0.00437582 177 0 9.10578e+07 0.0234968 174660 9.2458e+07 6.31285e+06 22407 4.52211e+07 0 0.134629 0.984855 0.828701 9.10578e+07 0.00502548 1.93757e+07 1.01207e+07 1.95289e+07 197 1.95194e+07 1.89147e+07 0.00469988 1.95977e+07 50.1001 0.00188907 0.987189 0 50.1969 GTEX-139TS-0426-SM-CYKPU 0 B1 2 pieces; small amount of internal fat, some boxcar nuclei suggesting myocyte hypertrophy, focal influx of neutrophils 5.6 Heart Heart - Left Ventricle 0006566 1142 1102 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 RIP-Seq GTEX-139TS-1426-SM-5IFJD 1 B1 2 pieces; some congestion and portal chronic inflammation 6.2 Liver Liver 0001114 1181 1063 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.985937 373619 0.965354 0.988399 0.828912 21901 1 76 0.00325504 187 0 8.39321e+07 0.0339849 1.28278e+06 8.49172e+07 6.27178e+06 21923 4.16925e+07 0 0.136441 0.988399 0.819296 8.39321e+07 0.00423978 1.80028e+07 1.81677e+07 1.81273e+07 209 1.8125e+07 1.34985e+07 0.00374618 1.82029e+07 50.1072 0.0151062 0.990861 0 50.1723 GTEX-139TS-1526-SM-DK2JL 2 B1 2 pieces; congested Spleen Spleen 0002106 1184 1060 BP-50661 DNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139TS-1526-SM-DLIO9 2 B1 2 pieces; congested Spleen Spleen 0002106 1184 1060 BP-50661 DNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-139TS-1726-SM-5IJG5 1 B1 2 pieces; spermatogenesis is present, increased peritubular fibrosis 6.5 Testis Testis 0000473 1187 1057 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986236 300312 0.926083 0.987962 0.73143 32802 1 76 0.00478478 150 0 8.15516e+07 0.0735384 392605 8.25453e+07 5.44432e+06 32866 4.0552e+07 0 0.194653 0.987962 0.722625 8.15516e+07 0.0048829 1.6749e+07 1.29581e+07 1.6858e+07 145 1.69172e+07 1.42077e+07 0.00483375 1.68206e+07 49.8568 0.00475624 0.989687 0 50.1623 GTEX-139TS-1926-SM-5IJFO 2 B1 6 pieces; moderately autolyzed mucosa and muscularis 6.4 Colon Colon - Transverse 0001157 1193 1051 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.983349 274831 0.970952 0.985379 0.814814 24340 1 76 0.00559974 171 0 8.78924e+07 0.025193 861515 8.91965e+07 5.81223e+06 24368 4.3496e+07 0 0.156138 0.985379 0.802901 8.78924e+07 0.00599925 1.94573e+07 1.28189e+07 1.96444e+07 195 1.96967e+07 1.40411e+07 0.00579908 1.95783e+07 49.8493 0.00965862 0.98741 0 50.2392 GTEX-139TS-2126-SM-5K7XC 1 B1 6 pieces; well trimmed, very minimal internal fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1199 1045 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989383 211595 0.970484 0.992115 0.820483 22552 1 76 0.00278356 135 0 6.11176e+07 0.0292836 664881 6.16033e+07 1.04784e+07 22567 3.03962e+07 0 0.150001 0.992115 0.814014 6.11176e+07 0.00419002 1.34575e+07 1.01022e+07 1.34494e+07 148 1.34304e+07 1.0114e+07 0.00348486 1.36418e+07 50.3903 0.0107929 0.994847 0 49.985 GTEX-139TS-2226-SM-5J2N1 1 B1 6 pieces; well trimmed 6 Colon Colon - Sigmoid 0001159 1201 1043 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.980135 427208 0.967624 0.984959 0.802721 26131 1 76 0.00456117 377 0 1.56116e+08 0.0321653 2.04277e+06 1.585e+08 9.35141e+06 26176 7.73571e+07 0 0.164903 0.984959 0.790647 1.56116e+08 0.0065546 3.32454e+07 1.58948e+07 3.36408e+07 390 3.37194e+07 2.25631e+07 0.00555301 3.38597e+07 50.1038 0.0128881 0.989783 0 50.2956 GTEX-139TS-2626-SM-5J1MT 1 B1 2 pieces; minimal internal fat 8 Muscle Muscle - Skeletal 0011907 1298 946 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990229 415516 0.9797 0.992159 0.875841 20169 1 76 0.00379647 271 0 1.05669e+08 0.0200944 1.39273e+06 1.06504e+08 5.6724e+06 20180 5.2609e+07 0 0.103859 0.992159 0.868974 1.05669e+08 0.00440849 2.29218e+07 1.80526e+07 2.31602e+07 270 2.31434e+07 2.28333e+07 0.00410189 2.31309e+07 49.9864 0.0130768 0.994089 0 50.2587 GTEX-139TS-2826-SM-5J1OO 1 B1 5 pieces; predominantly well trimmed, epidermis measures 24 to 34 microns thick 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1302 942 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987417 199383 0.978344 0.989537 0.824048 23218 1 76 0.00425705 188 0 8.56395e+07 0.0213905 504090 8.65451e+07 4.98436e+06 23241 4.25616e+07 0 0.154296 0.989537 0.815426 8.56395e+07 0.00503518 1.87738e+07 9.22752e+06 1.88146e+07 191 1.88373e+07 1.56159e+07 0.00464528 1.8928e+07 50.1201 0.0058246 0.991657 0 50.0542 GTEX-139TS-2926-SM-5KM1Z 1 B1 1 piece; adenohypophysis, neurohypophysis 6.7 Pituitary Pituitary 0000007 1340 904 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98689 248105 0.963878 0.989469 0.822526 24096 1 76 0.00385771 143 0 7.17981e+07 0.0358807 422480 7.25623e+07 3.44806e+06 24116 3.5677e+07 0 0.141352 0.989469 0.813864 7.17981e+07 0.00515798 1.45752e+07 1.31737e+07 1.47587e+07 156 1.47786e+07 1.32678e+07 0.00450615 1.47296e+07 49.9169 0.00582231 0.992048 0 50.3128 GTEX-139TS-3126-SM-5LZWX 1 B1 2 pieces; Purkinje cells well visualized 6.6 Brain Brain - Cerebellum 0002037 1344 900 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990385 305935 0.951228 0.991222 0.737502 23735 1 76 0.00346099 198 0 8.5193e+07 0.0484585 1.90301e+06 8.59475e+07 4.85371e+06 23757 4.23837e+07 0 0.213726 0.991222 0.731028 8.5193e+07 0.00374224 1.84145e+07 1.36055e+07 1.86441e+07 241 1.86365e+07 9.32259e+06 0.0036015 1.84848e+07 49.7957 0.0221416 0.992058 0 50.3098 GTEX-139TT-0004-SM-5DU4N B1 Blood Whole Blood 0013756 1165 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-139TT-0004-SM-5HJQ1 B1 Blood Whole Blood 0013756 1165 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-139TT-0004-SM-7DRNY B1 Blood Whole Blood 0013756 1165 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-139TT-0006-SM-5O9CG B1 7.2 Blood Whole Blood 0013756 1165 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.962178 507010 0.978934 0.964729 0.796628 19716 1 76 0.00405024 153 0 1.22242e+08 0.0197708 330619 1.26712e+08 5.26608e+06 19729 6.07232e+07 0 0.182306 0.964729 0.76853 1.22242e+08 0.00545627 2.83442e+07 1.77038e+08 2.87535e+07 190 2.88068e+07 3.09784e+07 0.0047514 2.86297e+07 49.8458 0.00260922 0.96728 0 50.3584 GTEX-139TT-0011-R11b-SM-5LZV1 B1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1145 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990337 475917 0.944052 0.991735 0.755756 22882 1 76 0.00263941 159 0 7.16528e+07 0.055565 901635 7.225e+07 3.67822e+06 22908 3.56466e+07 0 0.188296 0.991735 0.74951 7.16528e+07 0.00329134 1.53865e+07 1.32761e+07 1.54901e+07 176 1.55049e+07 9.2131e+06 0.00296491 1.54708e+07 49.945 0.0124794 0.993133 0 50.1677 GTEX-139TT-0011-R1a-SM-5LZVD B1, A1 6.9 Brain Brain - Hippocampus 0001954 1145 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990948 694688 0.949653 0.992107 0.830649 22643 1 76 0.00232936 269 0 7.39474e+07 0.0500985 3.24527e+06 7.45357e+07 3.53711e+06 22657 3.68291e+07 0 0.119004 0.992107 0.824093 7.39474e+07 0.00301796 1.59016e+07 2.45927e+07 1.61808e+07 277 1.6096e+07 7.10881e+06 0.00267325 1.60724e+07 49.9634 0.0435398 0.993266 0 50.4351 GTEX-139TT-0011-R3b-SM-5K7VL B1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1145 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986635 1.00217e+06 0.955507 0.98919 0.864599 23126 1 76 0.0041827 372 0 9.19219e+07 0.0441166 4.81347e+06 9.29264e+07 6.05541e+06 23141 4.56633e+07 0 0.0909082 0.98919 0.855253 9.19219e+07 0.00495362 1.99517e+07 2.80419e+07 2.00451e+07 332 1.99672e+07 1.17791e+07 0.00456717 2.02776e+07 50.3856 0.0517987 0.991745 0 50.1168 GTEX-139TT-0011-R5b-SM-5K7W8 B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1145 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.988943 1.07164e+06 0.956197 0.991149 0.860934 23442 1 76 0.00414153 373 0 1.04381e+08 0.0434101 5.85384e+06 1.05313e+08 6.83663e+06 23454 5.18985e+07 0 0.0952632 0.991149 0.853313 1.04381e+08 0.00478314 2.26097e+07 3.40686e+07 2.2758e+07 358 2.27291e+07 1.36461e+07 0.00446162 2.28651e+07 50.1491 0.0555852 0.993355 0 50.1635 GTEX-139TT-0011-R6b-SM-5J2ON B1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1145 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985711 753525 0.961305 0.989418 0.837808 24794 1 76 0.00414842 270 0 1.0873e+08 0.0382641 6.36637e+06 1.09893e+08 5.66334e+06 24820 5.3996e+07 0 0.123496 0.989418 0.828943 1.0873e+08 0.00580715 2.36319e+07 2.98678e+07 2.37971e+07 326 2.38376e+07 1.39323e+07 0.00497468 2.3958e+07 50.126 0.0579324 0.993124 0 50.1742 GTEX-139TT-0011-R7b-SM-5J2MN B1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 1145 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.98393 560358 0.956244 0.987772 0.834727 23821 1 76 0.00424958 198 0 8.17516e+07 0.0434624 3.80096e+06 8.27636e+07 4.58571e+06 23836 4.05734e+07 0 0.121516 0.987772 0.82452 8.17516e+07 0.0060137 1.76878e+07 2.02679e+07 1.78781e+07 240 1.7882e+07 9.00008e+06 0.00512821 1.79777e+07 50.1334 0.0459255 0.991614 0 50.2676 GTEX-139TT-0126-SM-5K7Y5 0 B1 6 pieces; well trimmed; 10-20% intradermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1165 1202 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990224 150682 0.972309 0.992659 0.801658 23526 1 76 0.00268744 162 0 6.51768e+07 0.0274036 267749 6.56588e+07 1.26097e+07 23546 3.24364e+07 0 0.170651 0.992659 0.795773 6.51768e+07 0.00389777 1.41837e+07 7.05112e+06 1.42454e+07 147 1.4273e+07 1.18378e+07 0.00329112 1.43057e+07 50.0573 0.00407788 0.995093 0 50.1085 GTEX-139TT-0226-SM-5K7YH 0 B1 2 pieces; 50% of 1 is fibrous tissue; 1mm nerve in other 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1180 1187 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990041 103795 0.973116 0.992545 0.790673 23124 1 76 0.00265266 143 0 5.75545e+07 0.0265499 202010 5.79868e+07 9.79426e+06 23147 2.86384e+07 0 0.182443 0.992545 0.784778 5.75545e+07 0.00385662 1.25845e+07 5.5698e+06 1.26189e+07 132 1.26436e+07 9.91536e+06 0.00325312 1.26961e+07 50.1036 0.00348373 0.995049 0 50.0682 GTEX-139TT-0326-SM-5IJC3 0 B1 2 pieces; well trimmed; 5-10% internal fat 5.8 Nerve Nerve - Tibial 0001323 1181 1186 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.986742 242000 0.963349 0.99031 0.72996 24196 1 76 0.00238456 144 0 6.78569e+07 0.0363977 218503 6.85209e+07 8.76481e+06 24233 3.36783e+07 0 0.233389 0.99031 0.722886 6.78569e+07 0.00441553 1.48138e+07 6.79621e+06 1.48879e+07 152 1.48898e+07 9.60711e+06 0.00339639 1.50451e+07 50.2594 0.00318885 0.993877 0 50.1248 GTEX-139TT-0426-SM-5IJFA 0 B1 2 pieces; 1mm tendon in 1 piece; 10% internal fat in each piece 8.2 Muscle Muscle - Skeletal 0011907 1182 1185 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.990123 195626 0.985093 0.991677 0.876328 20772 1 76 0.00427512 270 0 1.03041e+08 0.0146906 931533 1.03906e+08 6.57806e+06 20786 5.13019e+07 0 0.108766 0.991677 0.869034 1.03041e+08 0.00443749 2.24242e+07 1.20807e+07 2.25288e+07 265 2.25168e+07 2.19391e+07 0.00435618 2.25879e+07 50.0788 0.00896512 0.993231 0 50.1164 GTEX-139TT-0526-SM-5J1NN 1 B1 2 pieces; 1 has external fibrofatty tissue [annotated] 7.6 Blood Vessel Artery - Tibial 0007610 1184 1183 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984422 612813 0.975439 0.985266 0.847215 22175 1 76 0.00387319 212 0 9.78732e+07 0.0241806 443207 9.93368e+07 6.92952e+06 22197 4.8522e+07 0 0.128224 0.985266 0.834732 9.78732e+07 0.00474549 2.09493e+07 7.55826e+06 2.0924e+07 234 2.08955e+07 1.89049e+07 0.00430897 2.10585e+07 50.1943 0.00446166 0.98611 0 49.9698 GTEX-139TT-0726-SM-5K7XW 2 B1 2 pieces; 60% hemorrhage (consistent with pulmonary embolism); patchy fibrosis 6.9 Lung Lung 0008952 1200 1167 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988043 171425 0.971541 0.990885 0.742249 22952 1 76 0.00287863 132 0 6.78686e+07 0.0281341 330548 6.84929e+07 1.15896e+07 22982 3.37337e+07 0 0.229292 0.990885 0.735484 6.78686e+07 0.00414871 1.49917e+07 8.51543e+06 1.50174e+07 151 1.50402e+07 9.81848e+06 0.00351185 1.51551e+07 50.1903 0.00482602 0.993727 0 50.0428 GTEX-139TT-2126-SM-5LZWC 0 B1 6 pieces; well trimmed; 10-20% intradermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1241 1126 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.98727 217596 0.9746 0.98844 0.792854 23353 1 76 0.0025681 137 0 6.05196e+07 0.0251568 205654 6.12274e+07 3.1056e+06 23380 3.00898e+07 0 0.181746 0.98844 0.783689 6.05196e+07 0.00333373 1.33748e+07 6.27215e+06 1.33615e+07 137 1.33876e+07 1.11282e+07 0.00295046 1.34226e+07 50.0653 0.00335885 0.989609 0 49.975 GTEX-139TT-2226-SM-5LZWO 1 B1 2 pieces; spermatogenesis 6.6 Testis Testis 0000473 1263 1104 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990838 274298 0.930109 0.991977 0.736327 32268 1 76 0.00242557 150 0 7.45238e+07 0.0695214 409609 7.51266e+07 3.57809e+06 32326 3.71217e+07 0 0.193783 0.991977 0.730419 7.45238e+07 0.00299747 1.5603e+07 9.57819e+06 1.5631e+07 148 1.56724e+07 1.34065e+07 0.00271119 1.56395e+07 49.9474 0.00545225 0.993115 0 50.0448 GTEX-139TT-2626-SM-5LZUB 1 B1 2 pieces; well preserved Purkinje cells 7.1 Brain Brain - Cerebellum 0002037 1283 1084 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.990569 358071 0.950177 0.991782 0.736397 24299 1 76 0.00264555 201 0 8.36663e+07 0.0494003 895851 8.43595e+07 4.14837e+06 24324 4.16363e+07 0 0.213779 0.991782 0.730346 8.36663e+07 0.00327714 1.8126e+07 1.23317e+07 1.82701e+07 214 1.82988e+07 1.12641e+07 0.00296096 1.81904e+07 49.8514 0.0106194 0.992995 0 50.1979 GTEX-139TT-2726-SM-5IJFM 1 B1 1 piece; thick capsule along edge 6.5 Pituitary Pituitary 0000007 1282 1085 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985249 382849 0.961224 0.987192 0.817242 25542 1 76 0.00481429 207 0 9.34427e+07 0.0385615 514785 9.4655e+07 6.2671e+06 25574 4.63949e+07 0 0.143982 0.987192 0.806774 9.34427e+07 0.0054507 1.93801e+07 1.59277e+07 1.95483e+07 223 1.95603e+07 1.48773e+07 0.00513187 1.95465e+07 49.9825 0.00543854 0.989135 0 50.216 GTEX-139TU-0002-SM-5HJR5 C1 Blood Whole Blood 0013756 379 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139TU-0006-SM-5LZVN C1 9.2 Blood Whole Blood 0013756 379 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989936 375913 0.972215 0.991252 0.763481 20317 1 76 0.00287252 127 0 6.90395e+07 0.0273192 107531 6.96487e+07 3.34246e+06 20330 3.43763e+07 0 0.208734 0.991252 0.756802 6.90395e+07 0.00356072 1.54819e+07 3.06863e+07 1.55944e+07 132 1.56312e+07 1.43904e+07 0.00321616 1.55448e+07 49.8616 0.0015439 0.992569 0 50.181 GTEX-139TU-0008-SM-5ZZUK C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 529 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99552 415235 0.975298 0.99641 0.858032 20446 1 76 0.00168269 179 0 7.96192e+07 0.0243569 400441 7.9906e+07 7.04141e+06 20463 3.97135e+07 0 0.117265 0.99641 0.854952 7.96192e+07 0.00252857 1.77976e+07 1.34593e+07 1.78423e+07 177 1.7817e+07 2.07741e+07 0.00210525 1.78998e+07 50.1159 0.0050114 0.997301 0 50.0627 GTEX-139TU-0011-R5b-SM-5L3E1 C1, A1 6.4 Brain Brain - Caudate (basal ganglia) 0001873 385 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985079 549901 0.968052 0.989306 0.806415 24051 1 76 0.00285823 369 0 1.13163e+08 0.0317961 9.27576e+06 1.14386e+08 1.20587e+07 24074 5.62267e+07 0 0.161637 0.989306 0.797792 1.13163e+08 0.00396458 2.42504e+07 5.93727e+07 2.46113e+07 397 2.42726e+07 7.62111e+06 0.00340904 2.49905e+07 50.7287 0.0810918 0.993533 0 50.3693 GTEX-139TU-0126-SM-5K7WH 1 C1 6 pieces; relatively well trimmed, epidermis measures 38 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 527 830 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.988183 304860 0.972559 0.990491 0.805442 25009 1 76 0.00433344 253 0 1.05729e+08 0.027081 266999 1.06744e+08 6.86449e+06 25045 5.25539e+07 0 0.167117 0.990491 0.797783 1.05729e+08 0.00503565 2.29277e+07 1.09951e+07 2.31467e+07 238 2.32042e+07 1.99533e+07 0.00468372 2.31074e+07 49.8955 0.0025013 0.992799 0 50.2376 GTEX-139TU-0226-SM-5J1NM 0 C1 2 pieces 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 530 827 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989073 194346 0.97145 0.990777 0.773539 24073 1 76 0.004067 142 0 7.55763e+07 0.0281936 171570 7.62798e+07 4.20295e+06 24104 3.759e+07 0 0.197911 0.990777 0.766405 7.55763e+07 0.00466655 1.6614e+07 6.58584e+06 1.66866e+07 151 1.67111e+07 1.39364e+07 0.00436626 1.6715e+07 50.0058 0.00224922 0.992482 0 50.1091 GTEX-139TU-0326-SM-62LFK 0 C1 2 pieces, up to 10% attached and internal fat 7.2 Nerve Nerve - Tibial 0001323 532 825 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988227 244944 0.966364 0.991787 0.742933 24252 1 76 0.00282535 148 0 7.10708e+07 0.0333527 203292 7.16594e+07 4.91137e+06 24283 3.53108e+07 0 0.223432 0.991787 0.736831 7.10708e+07 0.00351308 1.55751e+07 6.38686e+06 1.56037e+07 153 1.56212e+07 1.12425e+07 0.00316798 1.57909e+07 50.27 0.00283692 0.995346 0 50.0459 GTEX-139TU-0526-SM-5J2M8 0 C1 2 pieces; minimal internal fat 7.1 Muscle Muscle - Skeletal 0011907 535 824 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985808 251571 0.983864 0.989754 0.884565 20749 1 76 0.00397097 206 0 9.93896e+07 0.0158829 703251 1.00418e+08 5.5131e+06 20762 4.9373e+07 0 0.099299 0.989754 0.875502 9.93896e+07 0.00570598 2.14525e+07 1.11067e+07 2.16122e+07 227 2.16446e+07 2.3086e+07 0.00483501 2.1777e+07 50.1525 0.0070032 0.9937 0 50.1854 GTEX-139TU-0626-SM-5KM3X 0 C1 2 pieces; predominantly fat with 10-20% fibrous stroma and few ducts 6.2 Breast Breast - Mammary Tissue 0008367 561 799 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986725 201345 0.965602 0.988598 0.751893 24118 1 76 0.00322348 130 0 6.31289e+07 0.0341246 241751 6.38571e+07 3.66808e+06 24147 3.13855e+07 0 0.213709 0.988598 0.743319 6.31289e+07 0.00422425 1.37793e+07 7.42042e+06 1.38601e+07 135 1.38585e+07 1.04967e+07 0.00372292 1.38956e+07 50.0667 0.00378582 0.99047 0 50.1461 GTEX-139TU-0726-SM-5L3EK 0 C1 6 pieces; well trimmed 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 564 796 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985256 190630 0.97237 0.989228 0.797306 23236 1 76 0.00317522 151 0 6.54579e+07 0.0274048 453582 6.61707e+07 6.50738e+06 23259 3.25222e+07 0 0.175064 0.989228 0.788717 6.54579e+07 0.00426084 1.43742e+07 8.35432e+06 1.43741e+07 149 1.44309e+07 1.08816e+07 0.00371585 1.45583e+07 50.2199 0.00685473 0.9932 0 49.9999 GTEX-139TU-0826-SM-5IJFG 1 C1 2 pieces; steatosis, bridging fibrosis, and chronic inflammation (?Nonalcoholic steatohepatitis) 6.2 Liver Liver 0001114 568 793 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985459 274160 0.973061 0.987426 0.807134 21765 1 76 0.00458116 154 0 7.89153e+07 0.0265712 1.67593e+06 7.99202e+07 5.08464e+06 21785 3.92196e+07 0 0.165927 0.987426 0.796985 7.89153e+07 0.00499092 1.71825e+07 1.27752e+07 1.73872e+07 192 1.74115e+07 1.07731e+07 0.00478563 1.73031e+07 49.8439 0.02097 0.989392 0 50.2961 GTEX-139TU-0926-SM-DK2K2 1 C1 2 pieces; some fibrosis Thyroid Thyroid 0002046 572 789 BP-53299 DNA Extraction from Paxgene-derived Lysate Plate Based 05/29/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139TU-0926-SM-DLIOG 1 C1 2 pieces; some fibrosis Thyroid Thyroid 0002046 572 789 BP-53299 DNA Extraction from Paxgene-derived Lysate Plate Based 05/29/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-139TU-1126-SM-5J1NY 1 C1 6 pieces; severe calcific atherosclerosis 5.9 Blood Vessel Artery - Aorta 0001496 588 774 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.983079 193276 0.969992 0.984852 0.725605 23097 1 76 0.00439481 119 0 6.24491e+07 0.029648 120940 6.34097e+07 4.04098e+06 23119 3.09531e+07 0 0.244388 0.984852 0.714613 6.24491e+07 0.00529966 1.3563e+07 5.62484e+06 1.36279e+07 131 1.36298e+07 8.96232e+06 0.00484642 1.36709e+07 50.0752 0.00190728 0.986625 0 50.1194 GTEX-139TU-1226-SM-5J2NL 1 C1 6 pieces; mucosa with partial epithelial sloughing, small portion of muscularis propria (marked) 6.8 Esophagus Esophagus - Mucosa 0006920 591 772 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982421 378872 0.971039 0.986727 0.778692 24012 1 76 0.00435922 157 0 8.61352e+07 0.0287231 721579 8.72939e+07 4.92255e+06 24040 4.26992e+07 0 0.192348 0.986727 0.768356 8.61352e+07 0.00627912 1.91569e+07 1.01178e+07 1.92758e+07 182 1.93564e+07 1.27724e+07 0.00531498 1.94362e+07 50.1029 0.00826609 0.991033 0 50.1547 GTEX-139TU-1326-SM-5LZXW 1 C1 6 pieces; well trimmed 5.7 Esophagus Esophagus - Muscularis 0004648 591 772 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.988948 168456 0.972648 0.989948 0.829142 21510 1 76 0.00320943 135 0 5.981e+07 0.0271806 1.22264e+06 6.04173e+07 3.62016e+06 21525 2.97364e+07 0 0.143506 0.989948 0.820808 5.981e+07 0.00374716 1.30202e+07 5.47596e+06 1.31896e+07 157 1.31724e+07 8.22522e+06 0.00347803 1.3095e+07 49.8526 0.0202366 0.990949 0 50.323 GTEX-139TU-1426-SM-5LZY9 0 C1 2 pieces; few central holes in one piece (?poor fixation) 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 592 772 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.98997 225811 0.973385 0.990685 0.760199 23039 1 76 0.0033385 128 0 6.03957e+07 0.0262743 243759 6.09636e+07 3.4274e+06 23057 3.00269e+07 0 0.213186 0.990685 0.753118 6.03957e+07 0.00369026 1.33564e+07 5.91721e+06 1.33905e+07 134 1.34199e+07 9.84209e+06 0.00351425 1.33774e+07 49.9207 0.00399844 0.991401 0 50.0637 GTEX-139TU-1926-SM-5J2OC 1 C1 2 pieces; interstitial fibrosis and one piece with 10-20% internal fat 7.2 Heart Heart - Atrial Appendage 0006631 602 765 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984486 754790 0.958845 0.988166 0.762837 23046 1 76 0.00412967 157 0 9.44478e+07 0.0408711 861496 9.55788e+07 4.96522e+06 23076 4.68704e+07 0 0.196008 0.988166 0.75381 9.44478e+07 0.0059258 1.97868e+07 2.86469e+07 1.99581e+07 177 2.00422e+07 1.6985e+07 0.00502439 2.00201e+07 49.9724 0.00901346 0.991846 0 50.2156 GTEX-139UC-0004-SM-5HJQ3 B1 Blood Whole Blood 0013756 643 BP-43620 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array EXCLUDE GTEX-139UC-0005-SM-5PNU7 B1 6.1 Blood Whole Blood 0013756 643 BP-43645 RNA isolation_PAXgene Blood RNA (Manual) 09/16/2013 LCSET-4917 03/27/2014 TruSeq.v1 EXCLUDE 0.978015 286062 0.980641 0.979878 0.81006 18317 1 76 0.00232387 116 0 6.15573e+07 0.0184617 178702 6.28214e+07 6.13754e+06 18323 3.06165e+07 0 0.170581 0.979878 0.79376 6.15573e+07 0.0039244 1.43049e+07 7.60032e+07 1.44425e+07 122 1.44172e+07 1.53401e+07 0.00312261 1.44576e+07 50.0699 0.00284461 0.98174 0 50.2394 GTEX-139UC-0008-SM-5ZZUG B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 878 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.994954 371042 0.978581 0.996122 0.864164 20059 1 76 0.00167114 180 0 8.23736e+07 0.0210817 252565 8.26943e+07 7.02265e+06 20071 4.10766e+07 0 0.114417 0.996122 0.860813 8.23736e+07 0.00270849 1.85162e+07 1.18586e+07 1.85791e+07 186 1.85724e+07 2.19668e+07 0.00218921 1.86234e+07 50.0686 0.0030542 0.99729 0 50.0848 GTEX-139UC-0011-R11a-SM-5KM3J B1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 627 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.990993 706847 0.957705 0.992789 0.870001 22245 1 76 0.0028649 203 0 7.433e+07 0.0417763 3.11775e+06 7.48699e+07 4.65588e+06 22254 3.6989e+07 0 0.0877039 0.992789 0.863727 7.433e+07 0.00371397 1.61859e+07 1.8757e+07 1.62851e+07 213 1.62854e+07 1.20679e+07 0.00328867 1.63336e+07 50.0739 0.0416423 0.994585 0 50.1528 GTEX-139UC-0011-R3b-SM-5K7VZ B1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 627 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.986421 1.34685e+06 0.950963 0.988874 0.859696 23391 1 76 0.00408256 373 0 1.05976e+08 0.04867 6.73795e+06 1.07168e+08 6.60753e+06 23408 5.26694e+07 0 0.0912665 0.988874 0.850131 1.05976e+08 0.00471872 2.27255e+07 4.03388e+07 2.31249e+07 373 2.30044e+07 1.29696e+07 0.00439985 2.31266e+07 50.1325 0.0628726 0.991326 0 50.4356 GTEX-139UC-0011-R4a-SM-5K7XM B1, A1 6.8 Brain Brain - Amygdala 0001876 627 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 EXCLUDE 0.989551 330825 0.966426 0.992372 0.854421 21252 1 76 0.00244346 179 0 5.95134e+07 0.0334186 6.10149e+06 5.99709e+07 1.04735e+07 21260 2.96128e+07 0 0.112005 0.992372 0.847903 5.95134e+07 0.00394888 1.32404e+07 1.75793e+07 1.29592e+07 206 1.28064e+07 4.1682e+06 0.00319403 1.35617e+07 51.4322 0.101741 0.995192 0 49.4634 GTEX-139UC-0011-R5b-SM-5K7VY B1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 627 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.985048 984533 0.957008 0.987601 0.864696 23032 1 76 0.00403229 271 0 8.86308e+07 0.042634 4.74358e+06 8.97436e+07 5.64812e+06 23046 4.40487e+07 0 0.0923123 0.987601 0.853974 8.86308e+07 0.00462909 1.9105e+07 2.93966e+07 1.9489e+07 311 1.94089e+07 1.11451e+07 0.00432992 1.94163e+07 50.0096 0.0528571 0.990155 0 50.4974 GTEX-139UC-0011-R6b-SM-5K7Z1 B1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 627 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 EXCLUDE 0.99062 396879 0.959218 0.993058 0.835784 22904 1 76 0.00247868 153 0 6.28904e+07 0.0404754 4.27771e+06 6.33301e+07 1.17062e+07 22918 3.13078e+07 0 0.123434 0.993058 0.829982 6.28904e+07 0.0036644 1.38719e+07 1.73221e+07 1.3647e+07 190 1.36039e+07 6.79718e+06 0.00307009 1.40644e+07 50.8322 0.0675462 0.995495 0 49.5913 GTEX-139UC-0011-R7a-SM-5IJCV B1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 627 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 EXCLUDE 0.989745 638589 0.952841 0.99277 0.817567 23637 1 76 0.00216732 194 0 7.01915e+07 0.0468926 4.15822e+06 7.07027e+07 8.37037e+06 23652 3.48818e+07 0 0.135274 0.99277 0.811656 7.01915e+07 0.0040459 1.53718e+07 1.85615e+07 1.5181e+07 214 1.5077e+07 7.42726e+06 0.00310375 1.56942e+07 51.003 0.0588129 0.995795 0 49.6876 GTEX-139UC-0011-R8b-SM-5IJCL B1, A1 6.3 Brain Brain - Hypothalamus 0001898 627 BP-45525 RNA isolation_PAXgene Tissue miRNA 11/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 EXCLUDE 0.989998 429530 0.962666 0.992812 0.831817 23593 1 76 0.00208631 270 0 7.32065e+07 0.0371257 5.21196e+06 7.37365e+07 9.77982e+06 23613 3.64169e+07 0 0.130849 0.992812 0.825838 7.32065e+07 0.00369159 1.62152e+07 2.09171e+07 1.60553e+07 277 1.5951e+07 6.61209e+06 0.00288668 1.65133e+07 50.8659 0.0706836 0.995626 0 49.7522 GTEX-139UC-0011-R9a-SM-5K7W7 B1, A1 7.8 Brain Brain - Spinal cord (cervical c-1) 0006469 627 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.98872 517640 0.961654 0.990622 0.796218 25491 1 76 0.00433035 286 0 9.87755e+07 0.0379182 1.61545e+06 9.97106e+07 6.09841e+06 25520 4.91056e+07 0 0.165437 0.990622 0.788751 9.87755e+07 0.00478093 2.17757e+07 1.68528e+07 2.20272e+07 277 2.19588e+07 1.54275e+07 0.0045552 2.20296e+07 50.0805 0.0162014 0.992524 0 50.2871 GTEX-139UC-0426-SM-5K7UR 1 B1 2 pieces, moderate interstitial fibrosis with ~3mm remote infarct, delineated 6.4 Heart Heart - Left Ventricle 0006566 697 1100 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.983962 184499 0.982861 0.986116 0.834642 20308 1 76 0.00386755 265 0 9.37914e+07 0.0170539 5.16051e+06 9.5112e+07 6.05542e+06 20313 4.66913e+07 0 0.148219 0.986116 0.823053 9.37914e+07 0.00432546 2.04617e+07 4.60186e+07 2.07195e+07 327 2.0611e+07 6.74811e+06 0.004096 2.0746e+07 50.1631 0.0542572 0.988269 0 50.3131 GTEX-139UC-0726-SM-DK2JS 1 B1 2 pieces, mild congestion Spleen Spleen 0002106 702 1095 BP-52487 DNA Extraction from Paxgene-derived Lysate Plate Based 05/07/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-139UC-0726-SM-DLIOD 1 B1 2 pieces, mild congestion Spleen Spleen 0002106 702 1095 BP-52487 DNA Extraction from Paxgene-derived Lysate Plate Based 05/07/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-139UC-1426-SM-5IJGH 1 B1 2 pieces, moderte congestion 6.4 Liver Liver 0001114 724 1073 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 EXCLUDE 0.984213 319256 0.97057 0.986387 0.824946 21716 1 76 0.00450112 265 0 9.06694e+07 0.0292352 2.60657e+06 9.19206e+07 6.17867e+06 21734 4.50203e+07 0 0.145624 0.986387 0.813716 9.06694e+07 0.00498815 1.96428e+07 1.80036e+07 1.98901e+07 261 1.98397e+07 1.1424e+07 0.0047441 1.98815e+07 50.0527 0.0283567 0.988562 0 50.3128 GTEX-139UC-2926-SM-5J1N6 0 B1 2 pieces, minimal interstitial fat 7.5 Muscle Muscle - Skeletal 0011907 882 915 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 EXCLUDE 0.989422 208580 0.980386 0.991459 0.867798 20443 1 76 0.00363356 159 0 8.64398e+07 0.0194051 994137 8.71845e+07 4.60371e+06 20457 4.30182e+07 0 0.112588 0.991459 0.860386 8.64398e+07 0.00437798 1.87512e+07 9.49977e+06 1.89919e+07 195 1.89702e+07 1.83348e+07 0.004005 1.89396e+07 49.9597 0.0114027 0.993497 0 50.3188 GTEX-139UC-3026-SM-5IJE4 1 B1 1 piece, ~40% neurohypophysis (delineated), ~7mm piece, 13x5mm adenohypophysis, rest is adherent dura 7.3 Pituitary Pituitary 0000007 910 887 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 EXCLUDE 0.987404 422579 0.960287 0.989263 0.794466 26241 1 76 0.00472214 275 0 1.1468e+08 0.0393941 305309 1.15925e+08 7.87828e+06 26275 5.70188e+07 0 0.16582 0.989263 0.785936 1.1468e+08 0.00502617 2.41046e+07 2.47031e+07 2.45209e+07 285 2.45658e+07 2.07297e+07 0.00487387 2.42701e+07 49.6973 0.00263368 0.991122 0 50.428 GTEX-139UC-3126-SM-5J1OY 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cortex 0001870 912 885 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 EXCLUDE 0.989319 413052 0.960498 0.9913 0.825074 23844 1 76 0.00385424 266 0 8.43554e+07 0.0392331 3.41718e+06 8.50957e+07 4.52521e+06 23861 4.19673e+07 0 0.135425 0.9913 0.817895 8.43554e+07 0.00460065 1.83666e+07 2.18133e+07 1.85175e+07 298 1.84792e+07 8.80753e+06 0.0042267 1.85576e+07 50.1059 0.0401569 0.99328 0 50.2046 GTEX-139UC-3226-SM-5N9EZ 1 B1 2 pieces, no abnormalities 5.7 Brain Brain - Cerebellum 0002037 914 883 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.987854 704053 0.935959 0.989406 0.701902 24992 1 76 0.00418223 200 0 8.87065e+07 0.0637241 1.46504e+06 8.96563e+07 4.54424e+06 25024 4.4087e+07 0 0.234057 0.989406 0.694467 8.87065e+07 0.00420246 1.89365e+07 2.58399e+07 1.91168e+07 218 1.91304e+07 1.0141e+07 0.00419233 1.9056e+07 49.9027 0.0163407 0.990959 0 50.2369 GTEX-139UW-0003-SM-5DU4H B1 Blood Whole Blood 0013756 557 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-139UW-0003-SM-5HJRP B1 Blood Whole Blood 0013756 557 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139UW-0003-SM-6WSC8 B1 Blood Whole Blood 0013756 557 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-139UW-0005-SM-5NQ8U B1 8.4 Blood Whole Blood 0013756 557 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.962918 376450 0.97949 0.96479 0.798413 17397 1 76 0.00221313 88 0 7.23739e+07 0.0196941 91526 7.50152e+07 6.56079e+06 17404 3.60134e+07 0 0.181077 0.96479 0.770301 7.23739e+07 0.00360097 1.69864e+07 1.29573e+08 1.73069e+07 110 1.73054e+07 2.00186e+07 0.00290571 1.71456e+07 49.7679 0.0012201 0.966663 0 50.4672 GTEX-139UW-0011-R11a-SM-5IJGN B1, A1 5.8 Brain Brain - Cerebellar Hemisphere 0002037 575 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984973 694754 0.959825 0.986783 0.796269 24161 1 76 0.00500712 369 0 1.43899e+08 0.0400136 8.40718e+06 1.45827e+08 9.15043e+06 24193 7.15271e+07 0 0.163557 0.986783 0.785745 1.43899e+08 0.00532724 3.03028e+07 6.52667e+07 3.14723e+07 403 3.09002e+07 8.50518e+06 0.00516689 3.10914e+07 50.1542 0.0576519 0.988593 0 50.9466 GTEX-139UW-0011-R9b-SM-5LZYT B1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 575 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991886 435620 0.95273 0.992675 0.807 21416 1 76 0.00322427 172 0 6.35357e+07 0.0469052 1.05627e+06 6.40045e+07 3.52688e+06 21431 3.15988e+07 0 0.14573 0.992675 0.801089 6.35357e+07 0.00359124 1.40714e+07 1.00105e+07 1.41966e+07 161 1.40606e+07 9.49038e+06 0.00340761 1.42614e+07 50.3545 0.0165031 0.993465 0 50.2214 GTEX-139UW-0126-SM-5KM1B 1 B1 2 pieces; several small foci of lymphoid cells [annotated]; possible early Hashimoto thyroiditis 7.2 Thyroid Thyroid 0002046 599 671 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985947 202631 0.96627 0.988228 0.730748 23778 1 76 0.0044121 127 0 7.149e+07 0.0317488 135263 7.23416e+07 3.23239e+06 23820 3.54676e+07 0 0.235522 0.988228 0.722145 7.149e+07 0.00547077 1.57067e+07 1.04695e+07 1.57793e+07 140 1.58488e+07 1.09358e+07 0.00494021 1.5795e+07 49.9148 0.00186978 0.990509 0 50.1153 GTEX-139UW-0226-SM-5K7WU 1 B1 2 pieces; patchy emphysema and fibrosis 6.3 Lung Lung 0008952 601 669 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989069 142465 0.974689 0.991649 0.792465 23326 1 76 0.00284422 165 0 7.95144e+07 0.0249633 452386 8.0184e+07 1.43769e+07 23352 3.95417e+07 0 0.182224 0.991649 0.785847 7.95144e+07 0.00418721 1.75723e+07 8.08358e+06 1.76263e+07 192 1.76127e+07 1.23491e+07 0.00351397 1.77852e+07 50.2437 0.00564185 0.994228 0 50.0767 GTEX-139UW-0326-SM-5J1ML 0 B1 4 pieces; <10% intradermal fat; well trimmed; labeled suprapubic skin according to TRF 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 606 664 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987268 282518 0.979771 0.989296 0.784085 23250 1 76 0.00416263 172 0 8.41292e+07 0.0199489 456859 8.50394e+07 4.74673e+06 23278 4.17839e+07 0 0.195686 0.989296 0.775692 8.41292e+07 0.00517488 1.86169e+07 8.87066e+06 1.86744e+07 179 1.86968e+07 1.4315e+07 0.00466772 1.87681e+07 50.0951 0.00537232 0.991325 0 50.0772 GTEX-139UW-0426-SM-5K7V4 1 B1 4 pieces; medial degeneration (abdominal aortic aneurysm clin hx); adherent periaortic stroma 6.8 Blood Vessel Artery - Aorta 0001496 608 662 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987311 139259 0.974197 0.98936 0.792324 22070 1 76 0.00438637 139 0 7.58413e+07 0.0253606 121049 7.6657e+07 4.61708e+06 22095 3.76921e+07 0 0.181873 0.98936 0.783894 7.58413e+07 0.00489931 1.63986e+07 6.10901e+06 1.64914e+07 152 1.65317e+07 1.38523e+07 0.00464231 1.65108e+07 49.9683 0.0015791 0.991409 0 50.1411 GTEX-139UW-1126-SM-5IJEJ 1 B1 6 pieces; chronic esophagitis; superficial epithelium sloughed 7.4 Esophagus Esophagus - Mucosa 0006920 635 635 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986198 267109 0.97355 0.988247 0.775015 24924 1 76 0.00480782 211 0 1.07628e+08 0.0261577 243212 1.08908e+08 7.13189e+06 24965 5.3489e+07 0 0.198535 0.988247 0.765907 1.07628e+08 0.00510885 2.41438e+07 1.22888e+07 2.43291e+07 253 2.43909e+07 1.86175e+07 0.00495802 2.4304e+07 49.9108 0.00223319 0.990296 0 50.1911 GTEX-139UW-2326-SM-5KM1Y 1 B1 6 pieces; well dissected muscularis 5.9 Colon Colon - Sigmoid 0001159 679 591 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.983719 190043 0.973949 0.986594 0.810101 21240 1 76 0.00402072 123 0 5.92993e+07 0.0258284 375021 6.01051e+07 2.98991e+06 21260 2.94255e+07 0 0.163848 0.986594 0.799241 5.92993e+07 0.00539164 1.26987e+07 4.80705e+06 1.27812e+07 134 1.27719e+07 9.86903e+06 0.00470418 1.28702e+07 50.1916 0.00623943 0.989469 0 50.1618 GTEX-139UW-2526-SM-62LFO 1 B1 2 pieces; 10% external fat on 1 piece 7.5 Blood Vessel Artery - Tibial 0007610 839 431 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988952 123019 0.974192 0.992136 0.78453 21903 1 76 0.00285499 147 0 7.01321e+07 0.0254523 201576 7.0688e+07 4.91302e+06 21929 3.48601e+07 0 0.189662 0.992136 0.77836 7.01321e+07 0.00342443 1.50618e+07 7.09501e+06 1.52237e+07 154 1.52233e+07 1.23958e+07 0.0031388 1.52648e+07 50.068 0.00285163 0.995319 0 50.2674 GTEX-139UW-2626-SM-5K7W1 0 B1 2 pieces; 10% internal fat in 1; 30% external fat in other piece 7 Muscle Muscle - Skeletal 0011907 840 430 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985488 754722 0.965463 0.988008 0.851162 20543 1 76 0.00422621 159 0 9.36189e+07 0.0342858 939045 9.47552e+07 6.53076e+06 20556 4.65616e+07 0 0.114301 0.988008 0.840955 9.36189e+07 0.0047316 2.01097e+07 2.6406e+07 2.02382e+07 189 2.03309e+07 2.05242e+07 0.00447826 2.0256e+07 49.9077 0.00991022 0.990529 0 50.1592 GTEX-139UW-2826-SM-5L3E7 0 B1 6 pieces; <10% intradermal fat; well trimmed; 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 845 425 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986397 180882 0.978446 0.990596 0.78398 21708 1 76 0.00335089 141 0 6.03772e+07 0.0213489 284067 6.09504e+07 6.28255e+06 21732 2.99828e+07 0 0.194466 0.990596 0.776607 6.03772e+07 0.00459142 1.32247e+07 7.70427e+06 1.32359e+07 129 1.33253e+07 1.08895e+07 0.00396853 1.33725e+07 50.0883 0.00466063 0.994795 0 50.0212 GTEX-139YR-0004-SM-5DU3U B1 Blood Whole Blood 0013756 -15 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-139YR-0004-SM-5HJRB B1 Blood Whole Blood 0013756 -15 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-139YR-0004-SM-6WSC7 B1 Blood Whole Blood 0013756 -15 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-139YR-0008-SM-5ZZUM B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 325 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995138 351384 0.973938 0.996101 0.831841 21447 1 76 0.00172332 224 0 9.3358e+07 0.0257277 409144 9.37234e+07 8.97005e+06 21467 4.6559e+07 0 0.142097 0.996101 0.828597 9.3358e+07 0.00260073 2.07785e+07 1.33494e+07 2.08379e+07 252 2.08046e+07 2.21539e+07 0.0021616 2.09078e+07 50.1236 0.00436544 0.997063 0 50.0713 GTEX-139YR-0126-SM-5IJEY 1 B1 2 pieces; cortex and medulla, scant attached fat 8 Adrenal Gland Adrenal Gland 0002369 157 698 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.989167 220117 0.977064 0.990692 0.823964 22928 1 76 0.00445138 159 0 8.53627e+07 0.0225929 992184 8.61647e+07 5.57386e+06 22952 4.24722e+07 0 0.153099 0.990692 0.816295 8.53627e+07 0.00457235 1.88696e+07 8.88981e+06 1.89721e+07 198 1.90228e+07 1.58795e+07 0.00451177 1.89455e+07 49.8981 0.011515 0.992216 0 50.1354 GTEX-139YR-0226-SM-5IFEM 1 B1 2 pieces; macrovesicular steatosis, Mallory hyaline, pericellular and perivenular fibrosis, and rare acute inflammation c/w alcohol use 5.9 Liver Liver 0001114 162 693 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989588 267726 0.976204 0.992754 0.851674 21490 1 76 0.00219647 200 0 8.48207e+07 0.0218187 1.15187e+06 8.54398e+07 9.85234e+06 21506 4.21176e+07 0 0.12453 0.992754 0.845502 8.48207e+07 0.00360125 1.8204e+07 1.59188e+07 1.83646e+07 245 1.84317e+07 1.61358e+07 0.00289662 1.8385e+07 49.9365 0.0134817 0.99592 0 50.2196 GTEX-139YR-0326-SM-5J1MC 0 B1 2 pieces 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 165 690 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988526 207109 0.977783 0.990456 0.811215 23883 1 76 0.00383495 276 0 1.05938e+08 0.0217955 1.10951e+06 1.06959e+08 5.62235e+06 23914 5.26919e+07 0 0.166567 0.990456 0.803473 1.05938e+08 0.00464381 2.33165e+07 1.15862e+07 2.35553e+07 298 2.35314e+07 1.85905e+07 0.00423859 2.35395e+07 50.0086 0.0103732 0.992385 0 50.2548 GTEX-139YR-0426-SM-5IFFV 1 B1 2 pieces 7.8 Spleen Spleen 0002106 163 692 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.985727 288742 0.963773 0.988964 0.756694 23432 1 76 0.00343444 123 0 6.15415e+07 0.0326521 324025 6.22283e+07 7.07132e+06 23461 3.04676e+07 0 0.20708 0.988964 0.748342 6.15415e+07 0.00518002 1.36446e+07 1.3921e+07 1.36982e+07 132 1.37787e+07 9.28780e+06 0.00430437 1.37609e+07 49.9676 0.00520704 0.9922 0 50.0982 GTEX-139YR-0526-SM-5L3DG 1 B1 2 pieces; 20% of one and 40% of second is fatty and fibrous tissue 7.8 Heart Heart - Atrial Appendage 0006631 167 688 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988267 215513 0.979594 0.991988 0.822904 21420 1 76 0.00275832 268 0 8.28862e+07 0.0202012 2.27317e+06 8.35556e+07 9.12115e+06 21437 4.12174e+07 0 0.15669 0.991988 0.816311 8.28862e+07 0.0035004 1.79925e+07 2.00221e+07 1.785e+07 264 1.78111e+07 1.08875e+07 0.00312797 1.83074e+07 50.6871 0.0272055 0.995708 0 49.8012 GTEX-139YR-0626-SM-5IJBT 1 B1 6 pieces; well trimmed 7.8 Blood Vessel Artery - Aorta 0001496 169 686 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989994 256014 0.977508 0.993135 0.852606 22384 1 76 0.00204275 218 0 8.94724e+07 0.0219522 334826 9.00909e+07 1.13951e+07 22399 4.44629e+07 0 0.124902 0.993135 0.846752 8.94724e+07 0.00383774 1.93905e+07 7.2746e+06 1.94811e+07 227 1.94842e+07 1.82237e+07 0.00293741 1.96575e+07 50.2214 0.00371653 0.996276 0 50.1165 GTEX-139YR-0726-SM-62LFN 1 B1 2 pieces; ~40% of one piece (up to 1.4mm) and 10% of second is attached fat, fragmented with severe calcific atherosclerosis and narrowing of the lumen 7.3 Blood Vessel Artery - Coronary 0001621 171 684 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988981 199211 0.973758 0.992425 0.802415 23658 1 76 0.00265969 213 0 8.91378e+07 0.0258598 828062 8.98181e+07 5.83517e+06 23691 4.42908e+07 0 0.171343 0.992425 0.796337 8.91378e+07 0.00339792 1.9627e+07 7.16182e+06 1.97443e+07 224 1.97098e+07 1.4785e+07 0.00302752 1.99437e+07 50.2948 0.00921932 0.99587 0 50.149 GTEX-139YR-0826-SM-5LZXY 0 B1 2 pieces 7 Heart Heart - Left Ventricle 0006566 173 682 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991827 193270 0.984983 0.992872 0.876023 19023 1 76 0.00279199 150 0 6.35073e+07 0.0147858 1.56551e+06 6.39632e+07 3.66817e+06 19029 3.16001e+07 0 0.10896 0.992872 0.869778 6.35073e+07 0.00324641 1.39114e+07 1.13879e+07 1.43271e+07 181 1.42206e+07 9.41919e+06 0.00301896 1.40667e+07 49.728 0.0244752 0.993917 0 50.736 GTEX-139YR-0926-SM-5LZYB 1 B1 2 pieces; congestion, hemorrhage, pneumonia 8.4 Lung Lung 0008952 177 678 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991292 331420 0.982624 0.992205 0.815383 22058 1 76 0.00320962 129 0 6.45672e+07 0.0170018 521943 6.50744e+07 3.47435e+06 22073 3.2119e+07 0 0.167241 0.992205 0.809027 6.45672e+07 0.00360983 1.45338e+07 5.76282e+06 1.46004e+07 143 1.4632e+07 1.24287e+07 0.00340954 1.45608e+07 49.8781 0.00802071 0.993118 0 50.1144 GTEX-139YR-1026-SM-5LZYN 1 B1 6 pieces; generally well trimmed, small amount of internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 183 672 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991541 216740 0.978347 0.992603 0.846554 22211 1 76 0.00308095 170 0 6.69625e+07 0.0214361 668267 6.74615e+07 3.76495e+06 22224 3.33125e+07 0 0.131794 0.992603 0.840292 6.69625e+07 0.00361551 1.47086e+07 6.46327e+06 1.48342e+07 166 1.48298e+07 1.19005e+07 0.00334794 1.47868e+07 49.9275 0.00990591 0.993665 0 50.2126 GTEX-139YR-1226-SM-5IFEU 0 B1 2 pieces; one piece is ~15% fat, vessels, and nerve 6.8 Thyroid Thyroid 0002046 187 668 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989852 275273 0.970735 0.992756 0.785396 24349 1 76 0.00209893 167 0 7.95676e+07 0.0289142 281887 8.01482e+07 9.19713e+06 24384 3.9573e+07 0 0.185339 0.992756 0.779706 7.95676e+07 0.00339219 1.74982e+07 6.85098e+06 1.75689e+07 176 1.7645e+07 1.50069e+07 0.00274367 1.76413e+07 49.9948 0.00351707 0.995659 0 50.1008 GTEX-139YR-1526-SM-5IFJ1 1 B1 2 pieces; islets well visualized, focal PanIN-1, some fibrosis 6.8 Pancreas Pancreas 0001150 196 659 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991443 332657 0.982056 0.993204 0.839771 22206 1 76 0.00298607 130 0 8.40894e+07 0.0176554 208985 8.46647e+07 5.90985e+06 22223 4.1866e+07 0 0.142285 0.993204 0.834064 8.40894e+07 0.00368035 1.91733e+07 1.38812e+07 1.92445e+07 143 1.93541e+07 2.28308e+07 0.0033326 1.92096e+07 49.8126 0.00246838 0.994966 0 50.0926 GTEX-139YR-1626-SM-5IJGK 1 B1 6 pieces 7.4 Esophagus Esophagus - Muscularis 0004648 211 644 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.988658 234566 0.977892 0.990357 0.841131 23005 1 76 0.00452483 279 0 1.01965e+08 0.0217849 463812 1.02958e+08 6.89361e+06 23020 5.07245e+07 0 0.136761 0.990357 0.833021 1.01965e+08 0.00461638 2.20633e+07 8.30955e+06 2.22307e+07 262 2.22444e+07 2.02813e+07 0.00457053 2.22186e+07 49.9709 0.00450488 0.992057 0 50.189 GTEX-139YR-1726-SM-5IFFK 0 B1 6 pieces 9.2 Esophagus Esophagus - Mucosa 0006920 205 650 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987753 278873 0.976252 0.990779 0.806998 22517 1 76 0.00251204 169 0 7.94092e+07 0.0232716 198567 8.01483e+07 9.64579e+06 22538 3.94901e+07 0 0.169253 0.990779 0.799557 7.94092e+07 0.00374039 1.7841e+07 1.4048e+07 1.79133e+07 174 1.79772e+07 1.59456e+07 0.00312434 1.80112e+07 50.0473 0.00247749 0.993804 0 50.1011 GTEX-139YR-1826-SM-5LZXA 0 B1 6 pieces; several pieces with 10-20% attached fat/vessels/nerve 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 211 644 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99121 242038 0.974736 0.992111 0.804912 22549 1 76 0.00309164 168 0 7.37576e+07 0.024981 570114 7.4344e+07 4.2611e+06 22571 3.66886e+07 0 0.169823 0.992111 0.798563 7.37576e+07 0.00347571 1.61075e+07 5.9843e+06 1.625e+07 174 1.62431e+07 1.21916e+07 0.0032835 1.61802e+07 49.903 0.00766859 0.993013 0 50.2203 GTEX-139YR-1926-SM-5LZXM 2 B1 6 pieces; predominantly mucosa and submucosa with scant residual attached muscularis 5.7 Stomach Stomach 0000945 217 638 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989002 222655 0.978787 0.990183 0.841764 22471 1 76 0.00299817 238 0 6.86447e+07 0.0206888 925978 6.93252e+07 3.90439e+06 22485 3.41255e+07 0 0.137023 0.990183 0.8335 6.86447e+07 0.00351236 1.54259e+07 3.41775e+07 1.58872e+07 201 1.58705e+07 1.2714e+07 0.00325496 1.55221e+07 49.445 0.013357 0.991364 0 50.7365 GTEX-139YR-2126-SM-5KM11 1 B1 6 pieces; predominantly mucosa, but with few strips of residual muscularis (marked) 8.2 Colon Colon - Transverse 0001157 226 629 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986481 140506 0.971884 0.9888 0.793071 23777 1 76 0.00404948 173 0 7.41227e+07 0.0265578 1.00729e+06 7.49622e+07 3.44946e+06 23809 3.68181e+07 0 0.178813 0.9888 0.784189 7.41227e+07 0.00500718 1.65241e+07 8.78044e+06 1.66049e+07 166 1.66591e+07 1.2082e+07 0.0045272 1.66313e+07 49.9583 0.0134373 0.99112 0 50.122 GTEX-139YR-2226-SM-5IFFW 1 B1 6 pieces; 3 of 6 include significant lymphoid component, 2 with small portion of muscularis 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 232 623 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988097 250419 0.97178 0.991112 0.796319 23854 1 76 0.0025083 163 0 7.28827e+07 0.026924 844209 7.35363e+07 8.54075e+06 23879 3.61957e+07 0 0.175461 0.991112 0.789241 7.28827e+07 0.00407549 1.62244e+07 9.86325e+06 1.62577e+07 174 1.62888e+07 1.15772e+07 0.00328951 1.64058e+07 50.1789 0.0114802 0.994126 0 50.0513 GTEX-139YR-2426-SM-5J1OB 0 B1 2 pieces; ~10% is stroma, nerve, and vessels 7 Adipose Tissue Adipose - Subcutaneous 0002190 324 531 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987789 221949 0.977345 0.989851 0.845777 23053 1 76 0.0039303 214 0 9.15225e+07 0.0223621 353873 9.2461e+07 5.21654e+06 23073 4.54962e+07 0 0.131569 0.989851 0.837193 9.15225e+07 0.00473986 1.99451e+07 8.19658e+06 2.00038e+07 218 1.9988e+07 1.77391e+07 0.00433424 2.01432e+07 50.1933 0.00382727 0.991912 0 50.0735 GTEX-139YR-2526-SM-5IJC6 0 B1 2 pieces; ~5% internal fat and small vessels 7.8 Muscle Muscle - Skeletal 0011907 320 535 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991252 240028 0.981522 0.993809 0.871062 19486 1 76 0.00189609 210 0 7.84065e+07 0.0182711 702489 7.88949e+07 1.10185e+07 19492 3.90278e+07 0 0.110459 0.993809 0.86567 7.84065e+07 0.00321669 1.72808e+07 1.22796e+07 1.71624e+07 250 1.71291e+07 1.44747e+07 0.00255469 1.75085e+07 50.5476 0.00890412 0.996367 0 49.8281 GTEX-139YR-2626-SM-5K7U4 0 B1 3 pieces; each with 20-30% predominantly internal fat 6.8 Nerve Nerve - Tibial 0001323 330 525 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985826 180784 0.970198 0.98807 0.746951 24712 1 76 0.00439222 188 0 9.20816e+07 0.029514 336401 9.31934e+07 6.01852e+06 24758 4.57588e+07 0 0.223247 0.98807 0.73804 9.20816e+07 0.00495648 2.02778e+07 8.1498e+06 2.04272e+07 193 2.04598e+07 1.45547e+07 0.00467371 2.04467e+07 49.9841 0.00360971 0.990313 0 50.1835 GTEX-139YR-2726-SM-5K7VV 1 B1 2 pieces; well trimmed, minute focus of calcification in one piece 7 Blood Vessel Artery - Tibial 0007610 329 526 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986107 165806 0.978172 0.988606 0.840675 22043 1 76 0.004288 215 0 9.93569e+07 0.0213974 492798 1.00502e+08 6.87031e+06 22065 4.93624e+07 0 0.137497 0.988606 0.831097 9.93569e+07 0.00502423 2.147e+07 8.21473e+06 2.1628e+07 217 2.16339e+07 2.07344e+07 0.00465519 2.1707e+07 50.0843 0.00490336 0.991106 0 50.1833 GTEX-139YR-5001-SM-AN3YP B1 Heart Heart - Left Ventricle 0006566 175 ChIP-Seq GTEX-139YR-5019-SM-AN3YT B1 Muscle Muscle - Skeletal 0011907 323 ChIP-Seq GTEX-13CF2-0004-SM-5DU48 B1 Blood Whole Blood 0013756 1318 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13CF2-0004-SM-5HJPZ B1 Blood Whole Blood 0013756 1318 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13CF2-0004-SM-6WSB1 B1 Blood Whole Blood 0013756 1318 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13CF2-0006-SM-5O99L B1 7.5 Blood Whole Blood 0013756 1319 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.955362 466904 0.976499 0.9587 0.78915 19196 1 76 0.00237891 111 0 8.64766e+07 0.0222326 237286 9.02019e+07 1.28182e+07 19201 4.28882e+07 0 0.187349 0.9587 0.756558 8.64766e+07 0.00461947 2.02002e+07 1.37271e+08 2.01479e+07 138 2.02574e+07 2.18145e+07 0.00349529 2.0407e+07 50.1839 0.00263061 0.962038 0 49.9352 GTEX-13CF2-0008-SM-62LDC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1424 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.985944 498864 0.976737 0.989508 0.864976 20285 1 76 0.0023797 222 0 9.13222e+07 0.0229221 310480 9.22905e+07 6.47926e+06 20298 4.54146e+07 0 0.111761 0.989508 0.855901 9.13222e+07 0.00296819 2.04152e+07 1.48275e+07 2.05246e+07 216 2.05986e+07 2.40563e+07 0.00267289 2.06548e+07 50.068 0.00336416 0.993072 0 50.1336 GTEX-13CF2-0011-R11b-SM-5LZXO B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 1327 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990292 371004 0.946831 0.991022 0.739471 23137 1 76 0.00338833 157 0 7.24301e+07 0.0527718 1.27798e+06 7.30863e+07 3.8904e+06 23165 3.60172e+07 0 0.207359 0.991022 0.732832 7.24301e+07 0.00366646 1.56589e+07 1.04742e+07 1.571e+07 175 1.57411e+07 8.46188e+06 0.00352729 1.56793e+07 49.9016 0.0174858 0.991751 0 50.0815 GTEX-13CF2-0011-R1a-SM-5LZY1 B1, A1 6.5 Brain Brain - Hippocampus 0001954 1327 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989424 251204 0.9698 0.990413 0.854315 20314 1 76 0.00323448 154 0 5.41725e+07 0.030094 5.9806e+06 5.46969e+07 3.21531e+06 20325 2.69273e+07 0 0.115485 0.990413 0.846125 5.41725e+07 0.00375857 1.18143e+07 1.71868e+07 1.22163e+07 191 1.19764e+07 2.54874e+06 0.00349626 1.20935e+07 50.2434 0.109341 0.991402 0 50.8364 GTEX-13CF2-0011-R2a-SM-5L3DC B1, A1 6.1 Brain Brain - Substantia nigra 0002038 1327 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988607 398650 0.966212 0.992346 0.839784 21318 1 76 0.00301854 273 0 7.59821e+07 0.0336231 1.01665e+07 7.65682e+07 7.78473e+06 21330 3.77854e+07 0 0.126428 0.992346 0.833357 7.59821e+07 0.00380334 1.6527e+07 2.97961e+07 1.66277e+07 287 1.63348e+07 5.79066e+06 0.00340946 1.70745e+07 51.107 0.132777 0.996085 0 50.1518 GTEX-13CF2-0011-R3b-SM-5LZZ6 B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1327 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992279 483360 0.962235 0.993072 0.849561 22318 1 76 0.00310378 197 0 6.91011e+07 0.0374789 4.11508e+06 6.95831e+07 3.67727e+06 22329 3.43784e+07 0 0.112674 0.993072 0.843675 6.91011e+07 0.00351733 1.5024e+07 1.87026e+07 1.53323e+07 229 1.51804e+07 6.63121e+06 0.00331039 1.52239e+07 50.0715 0.0591391 0.993865 0 50.5079 GTEX-13CF2-0011-R5a-SM-5LZWS B1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 1327 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99079 494421 0.966616 0.991688 0.829553 21409 1 76 0.00302114 369 0 8.99472e+07 0.0332521 1.04505e+07 9.07011e+07 4.96354e+06 21421 4.47947e+07 0 0.137063 0.991688 0.822658 8.99472e+07 0.00340457 1.88728e+07 4.6799e+07 2.00089e+07 345 1.96405e+07 5.63751e+06 0.00321268 1.92939e+07 49.555 0.11522 0.992586 0 51.4609 GTEX-13CF2-0011-R7b-SM-5K7UV B1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 1327 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.981425 858043 0.957104 0.984228 0.863534 21385 1 76 0.00433853 371 0 8.65243e+07 0.0426943 8.7867e+06 8.79108e+07 6.27577e+06 21398 4.29394e+07 0 0.0935698 0.984228 0.849915 8.65243e+07 0.0052685 1.89232e+07 2.89889e+07 1.92138e+07 337 1.89812e+07 8.00048e+06 0.00480219 1.94106e+07 50.5593 0.0999502 0.987032 0 50.381 GTEX-13CF2-0011-R8b-SM-5IJCX B1, A1 8.2 Brain Brain - Hypothalamus 0001898 1327 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990904 624911 0.953665 0.993496 0.837208 23683 1 76 0.00220163 156 0 6.42868e+07 0.0460243 4.11022e+06 6.47076e+07 7.96279e+06 23699 3.19773e+07 0 0.116457 0.993496 0.831763 6.42868e+07 0.00388507 1.40989e+07 1.86861e+07 1.40451e+07 198 1.39122e+07 6.57638e+06 0.00304115 1.44087e+07 50.8766 0.0635199 0.996088 0 49.9045 GTEX-13CF2-0226-SM-5L3DV 1 B1 2 pieces, no abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 1350 663 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987466 244501 0.971816 0.991724 0.789976 22096 1 76 0.00308141 116 0 6.26246e+07 0.0279047 943637 6.31472e+07 6.08237e+06 22121 3.11064e+07 0 0.181839 0.991724 0.783439 6.26246e+07 0.00409851 1.34036e+07 7.61218e+06 1.34196e+07 133 1.34966e+07 1.11729e+07 0.00358778 1.35676e+07 50.1312 0.0149435 0.995983 0 50.0298 GTEX-13CF2-0426-SM-5KM1H 1 B1 2 pieces, minimal interstitial fibrosis, nubbin (1mm) ahderent fat, delineated 5.9 Heart Heart - Left Ventricle 0006566 1353 660 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.982669 196650 0.982167 0.985194 0.821729 20199 1 76 0.0037105 265 0 9.29089e+07 0.0177737 6.50734e+06 9.43052e+07 4.50921e+06 20210 4.62385e+07 0 0.160437 0.985194 0.809563 9.29089e+07 0.0047519 1.98026e+07 5.42016e+07 2.02933e+07 323 2.01998e+07 6.21328e+06 0.00422987 2.00593e+07 49.8254 0.0690029 0.987718 0 50.612 GTEX-13CF2-1826-SM-5N9GK 3 B1 6 pieces, ~10% 'contaminant' totally autolyzed mucosa 5.7 Colon Colon - Sigmoid 0001159 1402 611 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987534 342174 0.967578 0.988906 0.801336 23806 1 76 0.00401271 269 0 9.91504e+07 0.0322417 1.57466e+06 1.00263e+08 4.98518e+06 23836 4.92515e+07 0 0.166242 0.988906 0.792446 9.91504e+07 0.00412139 2.13085e+07 1.02638e+07 2.13675e+07 313 2.12846e+07 1.36772e+07 0.00406697 2.15241e+07 50.2798 0.0157053 0.990278 0 50.0692 GTEX-13CF2-2026-SM-5K7VI 1 B1 2 pieces, fibroadipose tissue, no ductal elements 6.1 Breast Breast - Mammary Tissue 0008367 1406 607 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98664 170008 0.970236 0.988965 0.74554 25047 1 76 0.004426 160 0 8.31013e+07 0.0295241 485637 8.40286e+07 5.61745e+06 25091 4.12903e+07 0 0.224697 0.988965 0.737312 8.31013e+07 0.00510378 1.82677e+07 8.43053e+06 1.84213e+07 175 1.84366e+07 1.17682e+07 0.00476409 1.84406e+07 50.0054 0.00577943 0.991289 0 50.2093 GTEX-13CF2-2426-SM-5LZYL 1 B1 2 pieces glandular tissue ~20% tissue, rest stroma/mucosa. Recommend use for TMA/LCM studies 6.8 Salivary Gland Minor Salivary Gland 0006330 1419 594 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991561 244483 0.97378 0.992491 0.806905 23018 1 76 0.00322912 123 0 5.72524e+07 0.0257656 578542 5.76856e+07 3.10862e+06 23034 2.84726e+07 0 0.166875 0.992491 0.800846 5.72524e+07 0.00364168 1.26794e+07 6.54265e+06 1.27956e+07 137 1.27876e+07 9.17431e+06 0.00343521 1.27405e+07 49.9078 0.0100292 0.993421 0 50.2281 GTEX-13CF2-2526-SM-5LZYX 0 B1 6 pieces, adherent fat up to ~1mm, rep. delineated; squamous epithelium ~50 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1427 586 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990455 210511 0.98032 0.991384 0.861963 21569 1 76 0.00323445 161 0 6.29206e+07 0.0193999 326009 6.34675e+07 3.70902e+06 21580 3.12878e+07 0 0.118357 0.991384 0.854536 6.29206e+07 0.00386201 1.38183e+07 6.4136e+06 1.38283e+07 153 1.38466e+07 1.2208e+07 0.00354794 1.38631e+07 50.0299 0.00513663 0.992312 0 50.0181 GTEX-13CF2-2626-SM-5LZZA 0 B1 2 pieces, ~10-20% fibrovascular tissue intermingled, rep delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1425 588 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991566 203972 0.975935 0.992359 0.822983 21950 1 76 0.00311366 135 0 5.89482e+07 0.0237415 154729 5.94021e+07 3.29633e+06 21965 2.93288e+07 0 0.152952 0.992359 0.816695 5.89482e+07 0.00351589 1.30335e+07 4.74334e+06 1.3122e+07 139 1.31454e+07 1.08643e+07 0.00331462 1.30573e+07 49.832 0.00260478 0.993153 0 50.1692 GTEX-13CF2-2726-SM-5LZWW 0 B1 2 pieces, ~10% interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 1428 585 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.993659 215895 0.982433 0.994458 0.868446 19886 1 76 0.00283117 154 0 7.85011e+07 0.0173706 1.14165e+06 7.89386e+07 4.07364e+06 19896 3.91085e+07 0 0.113986 0.994458 0.863633 7.85011e+07 0.00312947 1.70616e+07 9.33528e+06 1.71203e+07 196 1.70907e+07 1.58757e+07 0.0029802 1.71479e+07 50.0835 0.0144625 0.995257 0 50.0859 GTEX-13CF2-2826-SM-5LZX9 0 B1 2 pieces, generally clean specimens, nubbin of ahderent fat up to ~0.5mm, delineated 6.4 Nerve Nerve - Tibial 0001323 1435 578 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991022 239823 0.966818 0.991652 0.747236 23262 1 76 0.0033073 134 0 5.91337e+07 0.0328813 153982 5.96315e+07 3.1788e+06 23297 2.93997e+07 0 0.219582 0.991652 0.740998 5.91337e+07 0.00369452 1.30231e+07 5.08408e+06 1.30629e+07 129 1.30849e+07 9.40118e+06 0.00350079 1.3039e+07 49.9121 0.00258222 0.992282 0 50.0763 GTEX-13CF2-3026-SM-5IFFX 1 B1 2 pieces, fragmented. No abnormalities 5.8 Brain Brain - Cerebellum 0002037 1477 536 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988795 334161 0.945153 0.991643 0.72559 24241 1 76 0.00246093 201 0 8.50555e+07 0.0545965 1.853e+06 8.57723e+07 9.20256e+06 24273 4.22814e+07 0 0.219562 0.991643 0.719527 8.50555e+07 0.00403895 1.82768e+07 1.61093e+07 1.8437e+07 230 1.84509e+07 8.72769e+06 0.00324767 1.84863e+07 50.0478 0.0216037 0.994491 0 50.2182 GTEX-13CF2-3226-SM-5IFF6 1 B1 1 piece, ~30% dura (delineated)--rest is adenohypophysis 6.5 Pituitary Pituitary 0000007 1482 531 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989961 308833 0.95674 0.992354 0.744464 26440 1 76 0.00233451 205 0 8.7105e+07 0.0430162 483222 8.77762e+07 8.78460e+06 26485 4.33357e+07 0 0.212276 0.992354 0.738772 8.7105e+07 0.00357644 1.77891e+07 1.0242e+07 1.79355e+07 215 1.79673e+07 1.31027e+07 0.00295398 1.79522e+07 49.9789 0.00550516 0.994747 0 50.2049 GTEX-13CF3-0004-SM-5HJRC B1 Blood Whole Blood 0013756 -131 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13CF3-0004-SM-5JVC6 B1 Blood Whole Blood 0013756 -131 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-5029 03/23/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13CF3-0004-SM-6WSD5 B1 Blood Whole Blood 0013756 -131 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13CF3-0006-SM-5N9ED B1 8.7 Blood Whole Blood 0013756 -131 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.958722 424824 0.984577 0.960252 0.826771 16568 1 76 0.00417113 107 0 1.03624e+08 0.0143942 176674 1.07914e+08 5.21959e+06 16568 5.15231e+07 0 0.157806 0.960252 0.793909 1.03624e+08 0.00420697 2.45785e+07 1.7866e+08 2.48894e+07 156 2.49484e+07 3.08778e+07 0.00418902 2.46926e+07 49.7424 0.00163718 0.961783 0 50.3142 GTEX-13CF3-0126-SM-5IFFM 1 B1 2 pieces; mostly cortex; 20% external fat; 7 Adrenal Gland Adrenal Gland 0002369 111 462 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.99136 240703 0.977825 0.993788 0.820522 23066 1 76 0.00229323 203 0 8.04808e+07 0.0218552 1.06919e+06 8.09839e+07 9.00951e+06 23084 4.00588e+07 0 0.157304 0.993788 0.815424 8.04808e+07 0.0036703 1.77298e+07 1.46182e+07 1.77841e+07 226 1.77675e+07 1.30063e+07 0.00298008 1.79218e+07 50.2162 0.0132024 0.996215 0 50.0764 GTEX-13CF3-0226-SM-5J1NW 1 B1 2 pieces; well preserved, non-congested 6.5 Spleen Spleen 0002106 113 460 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986859 327660 0.966278 0.988799 0.792297 24490 1 76 0.004765 165 0 8.98073e+07 0.0321797 334852 9.08246e+07 5.19788e+06 24524 4.45796e+07 0 0.17398 0.988799 0.783423 8.98073e+07 0.00548948 1.97618e+07 1.27397e+07 1.99364e+07 201 1.99592e+07 1.4117e+07 0.00512653 1.99091e+07 49.9372 0.0036868 0.99074 0 50.2199 GTEX-13CF3-0426-SM-5IJEU 1 B1 2 pieces; 60 & 50% bronchopneumonia; patchy emphysema 7.5 Lung Lung 0008952 121 452 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98768 215297 0.974736 0.989173 0.793545 24465 1 76 0.00476444 208 0 1.00344e+08 0.0247814 368134 1.01442e+08 6.3202e+06 24498 4.99186e+07 0 0.181191 0.989173 0.784953 1.00344e+08 0.00479307 2.21493e+07 9.98174e+06 2.23492e+07 253 2.23323e+07 1.7756e+07 0.00477873 2.23131e+07 49.9785 0.003629 0.990666 0 50.2246 GTEX-13CF3-0526-SM-5IJBV 1 B1 6 pieces; thick fibroadipose adventitia (1 mm) 5.9 Blood Vessel Artery - Aorta 0001496 125 448 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991544 202839 0.974353 0.993822 0.822258 22432 1 76 0.00213448 211 0 8.25057e+07 0.0252641 217339 8.30187e+07 1.05391e+07 22451 4.10582e+07 0 0.152095 0.993822 0.817178 8.25057e+07 0.00357719 1.79804e+07 8.14966e+06 1.80938e+07 209 1.80672e+07 1.563e+07 0.00285418 1.81907e+07 50.1703 0.00261795 0.996099 0 50.1572 GTEX-13CF3-0626-SM-5J1NO 1 B1 2 pieces; extensive atherosclerotic calcified plaques; <25% muscle 6 Blood Vessel Artery - Coronary 0001621 137 436 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989995 232589 0.973869 0.991583 0.835376 22177 1 76 0.00385934 213 0 9.63329e+07 0.0257591 343430 9.71507e+07 5.12484e+06 22199 4.79164e+07 0 0.138492 0.991583 0.828345 9.63329e+07 0.00449209 2.0833e+07 8.2247e+06 2.09716e+07 237 2.09533e+07 1.90573e+07 0.00417521 2.10035e+07 50.0599 0.00353502 0.993171 0 50.1658 GTEX-13CF3-0726-SM-5J2MY 1 B1 2 pieces; nuclear enlargement, contraction bands 7.6 Heart Heart - Left Ventricle 0006566 142 431 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985703 226337 0.983426 0.98945 0.85527 21078 1 76 0.00435075 198 0 9.07881e+07 0.0163186 1.70399e+06 9.17562e+07 4.99322e+06 21093 4.51096e+07 0 0.128157 0.98945 0.846246 9.07881e+07 0.0059653 1.98465e+07 1.97604e+07 2.00659e+07 240 1.99515e+07 1.59202e+07 0.00515497 2.02493e+07 50.3704 0.0185708 0.993196 0 50.2749 GTEX-13CF3-0826-SM-5LZYZ 1 B1 2 pieces; 1 with 60% internal & external fat; other <5% fat 8 Heart Heart - Atrial Appendage 0006631 147 426 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 EXCLUDE 0.992326 267408 0.979612 0.993176 0.842612 22263 1 76 0.00317679 156 0 7.03047e+07 0.01999 433962 7.07878e+07 3.85528e+06 22281 3.4988e+07 0 0.137 0.993176 0.836862 7.03047e+07 0.00350686 1.55315e+07 6.3053e+06 1.5686e+07 167 1.56727e+07 1.28913e+07 0.00334169 1.5604e+07 49.89 0.00613047 0.994025 0 50.2476 GTEX-13CF3-0926-SM-5LZZC 1 B1 2 pieces 7.7 Thyroid Thyroid 0002046 149 424 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991638 254064 0.968911 0.992378 0.741197 23876 1 76 0.0032849 134 0 7.07528e+07 0.0308059 256940 7.12962e+07 3.9386e+06 23910 3.52095e+07 0 0.227714 0.992378 0.735548 7.07528e+07 0.00357276 1.56076e+07 6.01492e+06 1.56404e+07 145 1.56498e+07 1.14183e+07 0.00342873 1.56475e+07 49.9964 0.00360384 0.993119 0 50.0524 GTEX-13CF3-1026-SM-5LZWY 1 B1 2 pieces, fragmented; 20% external fat on 1 7.6 Pancreas Pancreas 0001150 153 420 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991903 216103 0.975324 0.992737 0.840316 22061 1 76 0.00340613 135 0 8.11313e+07 0.024483 291295 8.17249e+07 4.25954e+06 22080 4.0405e+07 0 0.135008 0.992737 0.834213 8.11313e+07 0.00368425 1.84432e+07 1.39595e+07 1.85974e+07 149 1.85941e+07 1.99098e+07 0.00354507 1.85169e+07 49.8959 0.00356434 0.993571 0 50.2081 GTEX-13CF3-1126-SM-5LZXB 0 B1 several fragmented pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 154 419 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989725 195877 0.978496 0.990625 0.829631 21808 1 76 0.00316126 164 0 7.4378e+07 0.0212746 799562 7.50818e+07 3.88789e+06 21824 3.70295e+07 0 0.148865 0.990625 0.821853 7.4378e+07 0.00352762 1.64068e+07 8.8046e+06 1.67333e+07 194 1.66703e+07 1.13186e+07 0.00334428 1.65351e+07 49.7965 0.0106492 0.991526 0 50.4925 GTEX-13CF3-1226-SM-5LZXN 1 B1 6 pieces; only 2 lymphoid nodules [annotated] 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 166 407 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989835 232257 0.967929 0.990666 0.753939 23446 1 76 0.00384772 124 0 6.03373e+07 0.0307928 680234 6.09057e+07 3.34874e+06 23469 2.99741e+07 0 0.21399 0.990666 0.746902 6.03373e+07 0.00426067 1.34217e+07 8.01731e+06 1.35047e+07 135 1.35171e+07 8.11438e+06 0.00405402 1.34549e+07 49.8846 0.0111686 0.991497 0 50.154 GTEX-13CF3-1326-SM-5LZXZ 1 B1 4 pieces; muscularis and submucosa 7.8 Colon Colon - Sigmoid 0001159 178 395 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.993003 239336 0.976275 0.993732 0.843832 21624 1 76 0.00309709 147 0 6.83819e+07 0.0234343 392297 6.88132e+07 3.84622e+06 21643 3.40466e+07 0 0.132443 0.993732 0.838543 6.83819e+07 0.00340685 1.47412e+07 5.6879e+06 1.48401e+07 155 1.4821e+07 1.32054e+07 0.00325186 1.48089e+07 49.9796 0.0057009 0.994462 0 50.1672 GTEX-13CF3-1426-SM-5K7YY 1 B1 6 pieces; no mucosa. only muscularis and submucosa 7.1 Colon Colon - Transverse 0001157 182 391 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.992102 140975 0.977368 0.994183 0.83882 21845 1 76 0.00249364 176 0 7.299e+07 0.0223262 520985 7.34171e+07 1.2038e+07 21860 3.63477e+07 0 0.138548 0.994183 0.833941 7.299e+07 0.00357677 1.58979e+07 6.8792e+06 1.59624e+07 174 1.59423e+07 1.38153e+07 0.00303407 1.60585e+07 50.1817 0.00709624 0.996265 0 50.1013 GTEX-13CF3-1526-SM-5J2NB 1 B1 6 pieces; well dissected muscularis 6.8 Esophagus Esophagus - Muscularis 0004648 188 385 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984828 212855 0.977374 0.98874 0.845954 23173 1 76 0.00426618 276 0 9.94719e+07 0.0223816 749630 1.00605e+08 5.38616e+06 23195 4.93829e+07 0 0.13142 0.98874 0.836429 9.94719e+07 0.0060302 2.14561e+07 9.11204e+06 2.17778e+07 258 2.17608e+07 1.74244e+07 0.0051447 2.18236e+07 50.0721 0.00745124 0.992652 0 50.3721 GTEX-13CF3-1626-SM-5IFG9 1 B1 6 pieces; mucosa and abundant submucosa up to 2.7 mm thick; mild chronic esophagitis 9.4 Esophagus Esophagus - Mucosa 0006920 191 382 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988241 338467 0.978228 0.991637 0.832717 22506 1 76 0.00231184 148 0 7.13735e+07 0.0212543 273869 7.19754e+07 8.13451e+06 22527 3.54737e+07 0 0.145511 0.991637 0.825753 7.13735e+07 0.00384834 1.60758e+07 9.65263e+06 1.61519e+07 159 1.62248e+07 1.45756e+07 0.00307746 1.62398e+07 50.023 0.00380504 0.995033 0 50.1181 GTEX-13CF3-1726-SM-5LU9E 1 B1 6 pieces; well trimmed 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 196 377 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991749 279550 0.978113 0.99371 0.856169 21363 1 76 0.00434744 138 0 6.72164e+07 0.0215496 433926 6.76419e+07 5.56913e+06 21372 3.34382e+07 0 0.121943 0.99371 0.850784 6.72164e+07 0.00351239 1.45638e+07 5.82039e+06 1.46833e+07 150 1.46598e+07 1.31238e+07 0.00393074 1.47175e+07 50.0982 0.00641505 0.995671 0 50.2042 GTEX-13CF3-1826-SM-5J1NK 1 B1 2 pieces; 10% internal fat 7.4 Muscle Muscle - Skeletal 0011907 198 375 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989623 256550 0.980058 0.991487 0.867908 19962 1 76 0.0039737 283 0 9.04641e+07 0.019742 1.34958e+06 9.12408e+07 4.83364e+06 19968 4.50421e+07 0 0.11215 0.991487 0.860519 9.04641e+07 0.00458582 1.96263e+07 1.574e+07 1.97849e+07 261 1.97866e+07 1.70531e+07 0.00427918 1.97844e+07 49.9972 0.0147914 0.993351 0 50.2013 GTEX-13CF3-1926-SM-5K7WF 1 B1 6 pieces; full thickness; well preserved mucosa except for superficial sloughing 6.2 Stomach Stomach 0000945 199 374 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.982108 182610 0.982012 0.984325 0.854646 23099 1 76 0.00448039 444 0 1.10991e+08 0.0175926 1.20254e+06 1.12758e+08 7.62486e+06 23120 5.5219e+07 0 0.127367 0.984325 0.841249 1.10991e+08 0.00483934 2.51794e+07 9.67729e+07 2.56643e+07 346 2.56318e+07 2.50745e+07 0.00465946 2.54484e+07 49.8205 0.0106647 0.986542 0 50.4768 GTEX-13CF3-2126-SM-5IFJP 1 B1 2 pieces; ducts and atrophic lobules; 50 & 80% fat 7.2 Breast Breast - Mammary Tissue 0008367 206 367 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990381 177494 0.98043 0.99229 0.833931 22348 1 76 0.00309185 209 0 8.71127e+07 0.019236 606703 8.77895e+07 6.76442e+06 22369 4.33681e+07 0 0.146499 0.99229 0.827502 8.71127e+07 0.00376003 1.92575e+07 8.98967e+06 1.93915e+07 241 1.93866e+07 1.53646e+07 0.0034253 1.94209e+07 50.0442 0.00691088 0.994199 0 50.1734 GTEX-13CF3-2226-SM-5J2MX 1 B1 2 pieces; focal medial calcification 7.3 Blood Vessel Artery - Tibial 0007610 204 369 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.98436 246087 0.974521 0.988319 0.841477 22391 1 76 0.00422437 169 0 9.09511e+07 0.0251627 279674 9.2026e+07 5.19046e+06 22411 4.51215e+07 0 0.133044 0.988319 0.831648 9.09511e+07 0.00600137 1.96652e+07 8.26575e+06 1.97403e+07 195 1.9778e+07 1.77861e+07 0.00510931 1.9966e+07 50.2366 0.00303908 0.992279 0 50.0953 GTEX-13CF3-2326-SM-5IFGL 0 B1 2 pieces; small squamous carry-over artifact [annotated] 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 210 363 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989277 255290 0.978241 0.992493 0.816086 22238 1 76 0.0022792 169 0 7.4271e+07 0.0214372 299732 7.48327e+07 8.23899e+06 22264 3.6929e+07 0 0.162155 0.992493 0.809959 7.4271e+07 0.0037453 1.64004e+07 8.08695e+06 1.64732e+07 181 1.65093e+07 1.2974e+07 0.00300987 1.65904e+07 50.1225 0.00400536 0.995708 0 50.1107 GTEX-13CF3-2426-SM-5IFGX 1 B1 6 pieces; well trimmed; <5% intradermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 213 360 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988867 253081 0.973286 0.992044 0.793855 23346 1 76 0.00228433 174 0 7.45114e+07 0.0264851 259471 7.5109e+07 8.58071e+06 23373 3.70345e+07 0 0.179432 0.992044 0.787538 7.45114e+07 0.00394861 1.63219e+07 7.57108e+06 1.63753e+07 175 1.63824e+07 1.25208e+07 0.00311381 1.65471e+07 50.2501 0.00345459 0.99522 0 50.0817 GTEX-13CIG-0004-SM-5DU44 B1 Blood Whole Blood 0013756 767 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13CIG-0004-SM-5HJRO B1 Blood Whole Blood 0013756 767 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13CIG-0004-SM-6WSC9 B1 Blood Whole Blood 0013756 767 BP-43797 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13CIG-0006-SM-5P9HF B1 6.9 Blood Whole Blood 0013756 767 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.972869 541432 0.978171 0.973824 0.801016 19275 1 76 0.00302494 196 0 1.19051e+08 0.0208925 656023 1.22251e+08 4.18611e+06 19287 5.92198e+07 0 0.177155 0.973824 0.780049 1.19051e+08 0.0040958 2.74247e+07 1.52058e+08 2.80056e+07 217 2.78938e+07 2.8477e+07 0.00355984 2.76756e+07 49.8037 0.0053662 0.97478 0 50.524 GTEX-13CIG-0011-R3b-SM-5K7XF B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 826 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988264 290166 0.970861 0.991268 0.866686 21038 1 76 0.00254859 183 0 6.2212e+07 0.0288886 6.7834e+06 6.276e+07 1.14074e+07 21048 3.09442e+07 0 0.104176 0.991268 0.859118 6.2212e+07 0.00401627 1.38472e+07 1.48543e+07 1.38899e+07 205 1.37652e+07 5.70216e+06 0.0032802 1.41467e+07 50.6834 0.108085 0.994272 0 50.0769 GTEX-13CIG-0011-R5b-SM-5L3F2 B1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 826 BP-45421 RNA isolation_PAXgene Tissue miRNA 11/04/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988105 550344 0.958614 0.992069 0.835746 21292 1 76 0.00298415 194 0 6.69182e+07 0.0412073 7.41567e+06 6.74532e+07 7.10622e+06 21302 3.32641e+07 0 0.122868 0.992069 0.829117 6.69182e+07 0.00397544 1.44218e+07 2.94107e+07 1.45962e+07 223 1.44648e+07 5.09125e+06 0.00347781 1.47916e+07 50.5586 0.109938 0.996033 0 50.3005 GTEX-13CIG-0011-R8b-SM-5LZX5 B1, A1 7.7 Brain Brain - Hypothalamus 0001898 826 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991626 484457 0.959136 0.992578 0.847841 22951 1 76 0.00305021 158 0 6.81333e+07 0.0405495 3.0322e+06 6.86428e+07 3.89229e+06 22966 3.38936e+07 0 0.111295 0.992578 0.841548 6.81333e+07 0.00343313 1.49383e+07 1.47085e+07 1.51226e+07 200 1.51054e+07 8.76502e+06 0.00324149 1.50259e+07 49.8681 0.0441736 0.993529 0 50.3065 GTEX-13CIG-0011-R9a-SM-5K7VU B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 826 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98539 548143 0.962734 0.987853 0.844779 22227 1 76 0.00424444 383 0 1.05308e+08 0.0370459 1.0831e+07 1.06603e+08 7.05864e+06 22238 5.23404e+07 0 0.117955 0.987853 0.834518 1.05308e+08 0.00490242 2.29871e+07 2.96127e+07 2.37463e+07 374 2.32728e+07 9.94944e+06 0.00457261 2.37001e+07 50.4548 0.101601 0.990317 0 50.8123 GTEX-13CZU-0003-SM-5DU3K B1 Blood Whole Blood 0013756 -80 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13CZU-0003-SM-5HJRM_1 B1 Blood Whole Blood 0013756 -80 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13CZU-0003-SM-6WSC3 B1 Blood Whole Blood 0013756 -80 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13CZU-0005-SM-5LU8K B1 9.6 Blood Whole Blood 0013756 -80 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990644 570423 0.963165 0.99256 0.803676 19949 1 76 0.00484106 125 0 7.83648e+07 0.0362936 249060 7.89522e+07 7.0528e+06 19963 3.89775e+07 0 0.159489 0.99256 0.797697 7.83648e+07 0.00409626 1.71134e+07 2.81773e+07 1.72248e+07 146 1.72854e+07 1.59662e+07 0.00446938 1.72088e+07 49.8889 0.00315457 0.994476 0 50.1621 GTEX-13CZU-0008-SM-5ZZUI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 207 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995423 404562 0.978563 0.99634 0.862612 21109 1 76 0.00174602 176 0 8.36974e+07 0.0211018 258278 8.40049e+07 7.66634e+06 21121 4.17473e+07 0 0.115951 0.99634 0.859455 8.36974e+07 0.002618 1.8902e+07 1.20903e+07 1.89316e+07 193 1.89275e+07 2.24166e+07 0.00218161 1.89873e+07 50.0789 0.00307456 0.997256 0 50.0391 GTEX-13CZU-5001-SM-AN3YV B1 Lung Lung 0008952 85 ChIP-Seq GTEX-13CZV-0003-SM-5DU45 B1 Blood Whole Blood 0013756 832 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13CZV-0003-SM-5HJPB B1 Blood Whole Blood 0013756 832 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13CZV-0003-SM-6WSB7 B1 Blood Whole Blood 0013756 832 BP-43799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13CZV-0006-SM-5P9IN B1 6.6 Blood Whole Blood 0013756 832 BP-43801 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2013 LCSET-4916 03/27/2014 TruSeq.v1 EXCLUDE 0.952811 396676 0.982862 0.953829 0.802165 14975 1 76 0.00335023 96 0 9.82724e+07 0.015993 244663 1.03029e+08 3.66332e+06 14976 4.89096e+07 0 0.180697 0.953829 0.765128 9.82724e+07 0.00421015 2.33448e+07 1.90887e+08 2.37759e+07 130 2.36908e+07 2.85034e+07 0.00377973 2.35467e+07 49.8475 0.00237469 0.954847 0 50.4575 GTEX-13CZV-0008-SM-5ZZUE B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1008 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995137 277670 0.974992 0.996105 0.845044 20731 1 76 0.00176436 179 0 7.70853e+07 0.0246847 374817 7.73867e+07 7.01113e+06 20750 3.84449e+07 0 0.129947 0.996105 0.841753 7.70853e+07 0.00265223 1.71534e+07 1.09238e+07 1.72243e+07 171 1.71905e+07 1.88211e+07 0.00220786 1.72691e+07 50.114 0.00484343 0.997072 0 50.1031 GTEX-13CZV-0011-R10b-SM-5LZYD B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 1021 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991273 416089 0.956133 0.992118 0.82241 23300 1 76 0.00326887 157 0 6.7341e+07 0.0435372 2.14148e+06 6.7876e+07 3.97427e+06 23319 3.35047e+07 0 0.133723 0.992118 0.815928 6.7341e+07 0.00358799 1.46586e+07 1.08749e+07 1.48056e+07 188 1.47997e+07 7.86547e+06 0.0034283 1.47185e+07 49.8624 0.0315498 0.992963 0 50.2495 GTEX-13CZV-0011-R10b-SM-CYKS6 B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 1021 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 RIP-Seq GTEX-13CZV-0011-R11b-SM-5N9FN B1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 1021 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986994 715669 0.945494 0.988402 0.769723 23685 1 76 0.00432795 267 0 1.04287e+08 0.0543356 6.35765e+06 1.05511e+08 5.92296e+06 23716 5.17666e+07 0 0.175771 0.988402 0.760796 1.04287e+08 0.00437757 2.21841e+07 2.87212e+07 2.26857e+07 324 2.25802e+07 6.53751e+06 0.00435272 2.24288e+07 49.8319 0.060256 0.98981 0 50.559 GTEX-13CZV-0011-R3a-SM-5KM27 B1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1021 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98722 447279 0.961188 0.989505 0.835129 23212 1 76 0.00395339 267 0 7.84943e+07 0.0385038 4.89311e+06 7.93269e+07 3.53346e+06 23231 3.90447e+07 0 0.126059 0.989505 0.826364 7.84943e+07 0.00498705 1.6975e+07 2.03643e+07 1.72462e+07 256 1.71484e+07 7.9313e+06 0.00446903 1.72318e+07 50.1213 0.0616828 0.991789 0 50.3962 GTEX-13CZV-0011-R4b-SM-5J2NY B1, A1 6.8 Brain Brain - Amygdala 0001876 1021 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.963539 732135 0.96054 0.96826 0.841171 23471 1 76 0.00480062 368 0 1.08127e+08 0.039303 1.35973e+07 1.11671e+08 6.5297e+06 23486 5.35797e+07 0 0.119369 0.96826 0.814472 1.08127e+08 0.00676573 2.32371e+07 3.77652e+07 2.40064e+07 379 2.35648e+07 6.35606e+06 0.00577838 2.41152e+07 50.5772 0.121761 0.972981 0 50.8142 GTEX-13CZV-0011-R5a-SM-5K7XA B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 1021 BP-45509 RNA isolation_PAXgene Tissue miRNA 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990083 494154 0.955561 0.99226 0.822264 22974 1 76 0.0028437 195 0 6.94877e+07 0.0441932 4.41209e+06 7.00297e+07 1.27903e+07 22988 3.46035e+07 0 0.133297 0.99226 0.8159 6.94877e+07 0.00393466 1.5169e+07 2.39254e+07 1.50096e+07 225 1.48944e+07 6.61544e+06 0.00338798 1.54347e+07 50.8907 0.0630032 0.994437 0 49.7359 GTEX-13CZV-0011-R7b-SM-5LZXH B1, A1 6.9 Brain Brain - Putamen (basal ganglia) 0001874 1021 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992513 483695 0.962308 0.993216 0.836274 21563 1 76 0.00342004 196 0 7.22713e+07 0.0375274 6.28748e+06 7.2765e+07 3.98034e+06 21575 3.59667e+07 0 0.126034 0.993216 0.830601 7.22713e+07 0.00380008 1.55031e+07 2.64773e+07 1.6034e+07 246 1.57826e+07 5.4384e+06 0.00360992 1.58042e+07 50.0342 0.086408 0.993918 0 50.8418 GTEX-13CZV-0011-R9a-SM-5LZXT B1, A1 5.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1021 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990972 352497 0.958949 0.991777 0.8286 21841 1 76 0.00324454 169 0 6.15568e+07 0.0408035 2.8698e+06 6.20672e+07 3.38495e+06 21856 3.06254e+07 0 0.13035 0.991777 0.821786 6.15568e+07 0.0036569 1.35665e+07 1.04605e+07 1.39175e+07 172 1.3735e+07 7.13869e+06 0.00345055 1.37863e+07 50.0932 0.0462369 0.992582 0 50.6386 GTEX-13D11-0003-SM-5HJQR B1 Blood Whole Blood 0013756 -64 BP-43879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/23/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13D11-0003-SM-5JVBH B1 Blood Whole Blood 0013756 -64 BP-43879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/23/2013 LCSET-5029 03/23/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13D11-0003-SM-6WSCK B1 Blood Whole Blood 0013756 -64 BP-43879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/23/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13D11-0226-SM-5LZXL 1 B1 2 pieces, noudular (microfollicular) goiter, focal lymphyocytic thyroiditis 7.5 Thyroid Thyroid 0002046 86 1199 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991945 259523 0.974406 0.992647 0.818894 22960 1 76 0.00328176 138 0 6.68324e+07 0.0250999 345341 6.73275e+07 3.7786e+06 22979 3.32357e+07 0 0.155512 0.992647 0.812873 6.68324e+07 0.00378529 1.47731e+07 6.10369e+06 1.48508e+07 149 1.48641e+07 1.26669e+07 0.00353335 1.48084e+07 49.9062 0.00512927 0.993349 0 50.1312 GTEX-13D11-0326-SM-5LZXX 1 B1 2 pieces, emphysematous changes, acute bronchitis/pneumonitis, focal, mild 8.8 Lung Lung 0008952 88 1197 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992222 278483 0.97791 0.992909 0.839803 23353 1 76 0.00323574 162 0 7.28976e+07 0.0215934 293698 7.34182e+07 3.95725e+06 23373 3.62874e+07 0 0.138107 0.992909 0.833848 7.28976e+07 0.00349384 1.62514e+07 6.24401e+06 1.63254e+07 166 1.63406e+07 1.47128e+07 0.0033647 1.62866e+07 49.9173 0.00400034 0.993595 0 50.1135 GTEX-13D11-0426-SM-5LZYA 1 B1 3 pieces, well preserved cortex and medulla (delineated)--good specimen 8.8 Adrenal Gland Adrenal Gland 0002369 92 1193 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991968 237441 0.977214 0.993171 0.836952 22058 1 76 0.00319037 130 0 6.15727e+07 0.0224451 1.22485e+06 6.19961e+07 3.25327e+06 22072 3.06424e+07 0 0.140262 0.993171 0.831237 6.15727e+07 0.00357561 1.36176e+07 7.1674e+06 1.37371e+07 149 1.37079e+07 9.87066e+06 0.00338275 1.37147e+07 50.0124 0.0197568 0.994375 0 50.2186 GTEX-13D11-0526-SM-5LZYM 1 B1 2 pieces, minimal fibrovascular component 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 94 1191 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991102 370696 0.977957 0.992377 0.841938 22171 1 76 0.00317997 146 0 6.76818e+07 0.0217531 427972 6.82018e+07 3.98266e+06 22184 3.36488e+07 0 0.136019 0.992377 0.83552 6.76818e+07 0.00369086 1.48739e+07 5.62761e+06 1.50191e+07 162 1.5028e+07 1.22043e+07 0.00343509 1.49509e+07 49.8715 0.00627509 0.993652 0 50.2428 GTEX-13D11-0626-SM-5LZYY 1 B1 6 pieces, all muscularis, trace adherent serosa, delineated (rep) 7.9 Colon Colon - Sigmoid 0001159 97 1188 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991704 204003 0.976524 0.992592 0.834103 21286 1 76 0.00313148 136 0 5.68865e+07 0.023199 418802 5.7311e+07 3.16838e+06 21298 2.8321e+07 0 0.142422 0.992592 0.827924 5.68865e+07 0.00341351 1.23576e+07 4.87203e+06 1.24323e+07 133 1.24119e+07 1.03326e+07 0.00327237 1.24279e+07 50.0323 0.00730753 0.99348 0 50.1507 GTEX-13D11-0726-SM-5LZZB 1 B1 6 pieces, all mucosa, well preserved, abudnant lymphoid/Peyer aggregates are ~50% of tissue 7.7 Small Intestine Small Intestine - Terminal Ileum 0001211 102 1183 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99047 214640 0.975204 0.991512 0.813711 22511 1 76 0.00347862 154 0 6.91405e+07 0.0241632 831850 6.97324e+07 3.78626e+06 22534 3.44081e+07 0 0.161493 0.991512 0.806804 6.91405e+07 0.00376295 1.54453e+07 8.66061e+06 1.55737e+07 163 1.55634e+07 1.13552e+07 0.00362064 1.55249e+07 49.9381 0.0119292 0.992554 0 50.2071 GTEX-13D11-0826-SM-5KLZJ 1 B1 6 pieces, mucosa unusually well preserved, ~0.5mm, ~50% thickness 7.1 Colon Colon - Transverse 0001157 105 1180 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986634 197437 0.973645 0.988821 0.819589 23309 1 76 0.00440563 213 0 8.10024e+07 0.0240886 1.61321e+06 8.19182e+07 3.61265e+06 23334 4.01954e+07 0 0.154056 0.988821 0.810427 8.10024e+07 0.00539494 1.78941e+07 1.3226e+07 1.80817e+07 211 1.80195e+07 1.17697e+07 0.00489919 1.81143e+07 50.1311 0.0196929 0.991008 0 50.2607 GTEX-13D11-0926-SM-5J2NC 0 B1 pieces 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 110 1175 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983358 257538 0.968347 0.987478 0.79526 24131 1 76 0.00439697 193 0 8.63705e+07 0.0314224 616946 8.74657e+07 4.96524e+06 24156 4.28557e+07 0 0.173086 0.987478 0.785302 8.63705e+07 0.00628159 1.88175e+07 1.24432e+07 1.8974e+07 177 1.90451e+07 1.48857e+07 0.00533535 1.90837e+07 50.0506 0.00705358 0.991599 0 50.2071 GTEX-13D11-1026-SM-5IJFB 0 B1 3 pieces, post menopausal atophy; duct & lobular elements delineated (rep)--small focus apocrine metplasia delineated and ensquared 6.5 Breast Breast - Mammary Tissue 0008367 111 1174 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987417 231123 0.976095 0.989217 0.822139 24508 1 76 0.00465777 173 0 9.27735e+07 0.0233983 425988 9.37848e+07 6.04781e+06 24535 4.61135e+07 0 0.153956 0.989217 0.813274 9.27735e+07 0.00497567 2.03976e+07 8.95548e+06 2.06537e+07 201 2.06431e+07 1.77224e+07 0.00481643 2.0576e+07 49.9187 0.00454219 0.991018 0 50.312 GTEX-13D11-1126-SM-5KLYS 1 B1 2 pieces, small simple cyst, encircled; corpora albicantia delineated. Typical post menopausal changes 7.2 Ovary Ovary 0000992 120 1165 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986255 286487 0.974121 0.988718 0.810985 24111 1 76 0.00375159 283 0 1.07864e+08 0.0254663 355627 1.09095e+08 5.00159e+06 24146 5.36406e+07 0 0.163137 0.988718 0.801835 1.07864e+08 0.00479755 2.3738e+07 1.06499e+07 2.3983e+07 274 2.40166e+07 2.11703e+07 0.00427327 2.39599e+07 49.9409 0.0032598 0.991181 0 50.2566 GTEX-13D11-1226-SM-5IFGA 1 B1 2 pieces, ~0.5mm layer of inactive endometrium, delineated 8 Uterus Uterus 0000995 122 1163 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989963 307901 0.971625 0.993038 0.803435 23279 1 76 0.00208318 171 0 7.77296e+07 0.0280727 229480 7.82745e+07 8.08275e+06 23301 3.86367e+07 0 0.16819 0.993038 0.797842 7.77296e+07 0.00370991 1.7007e+07 6.6813e+06 1.70726e+07 181 1.7084e+07 1.39355e+07 0.00289403 1.72291e+07 50.2115 0.00293173 0.996113 0 50.0962 GTEX-13D11-1326-SM-5IJFY 0 B1 6 pieces, Squamous mucosa is ~100 microns 7.8 Vagina Vagina 0000996 125 1160 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985118 206646 0.976827 0.987457 0.852764 23690 1 76 0.00477937 172 0 8.88827e+07 0.0226615 290674 9.00117e+07 5.98646e+06 23709 4.41392e+07 0 0.124063 0.987457 0.842067 8.88827e+07 0.00544915 1.97269e+07 1.00965e+07 1.98753e+07 180 1.98923e+07 1.92554e+07 0.00511347 1.99205e+07 50.0353 0.00322929 0.989795 0 50.1874 GTEX-13D11-1426-SM-5K7Y9 1 B1 6 pieces, minimal atherosis 8.3 Blood Vessel Artery - Aorta 0001496 126 1159 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99158 177019 0.977031 0.993932 0.85201 21390 1 76 0.00253708 138 0 6.47668e+07 0.022532 164716 6.51622e+07 1.06643e+07 21402 3.22334e+07 0 0.125022 0.993932 0.84684 6.47668e+07 0.00390732 1.40578e+07 5.05766e+06 1.41777e+07 147 1.418e+07 1.36058e+07 0.00322058 1.42036e+07 50.0416 0.00252778 0.996285 0 50.2124 GTEX-13D11-1526-SM-5J2NA 1 B1 2 pieces, no abnormalities, ~25% fat, delineated 8.9 Heart Heart - Atrial Appendage 0006631 128 1157 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.950983 285462 0.981155 0.956083 0.854465 21684 1 76 0.00427993 199 0 9.37849e+07 0.0185021 1.28442e+06 9.80929e+07 5.54860e+06 21701 4.65134e+07 0 0.12669 0.956083 0.81694 9.37849e+07 0.00605604 1.96854e+07 1.2393e+07 1.98715e+07 223 1.99443e+07 1.7974e+07 0.00516325 2.00324e+07 50.1102 0.0130939 0.961184 0 50.2352 GTEX-13D11-1726-SM-5IFGQ 1 B1 2 pieces, minimal interstitial fibrosis 8 Heart Heart - Left Ventricle 0006566 138 1147 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990911 186825 0.985461 0.993075 0.858771 20622 1 76 0.00226476 270 0 8.60131e+07 0.0142513 2.25684e+06 8.66129e+07 8.52713e+06 20631 4.28372e+07 0 0.126689 0.993075 0.852824 8.60131e+07 0.00332453 1.88018e+07 2.25567e+07 1.888e+07 276 1.86115e+07 1.39813e+07 0.00279349 1.92367e+07 50.826 0.0260567 0.995238 0 50.1038 GTEX-13D11-1826-SM-5J2NM 1 B1 6 pieces, all muscularis, trace serosa, delineated 8.6 Esophagus Esophagus - Muscularis 0004648 143 1142 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.986455 219651 0.980599 0.990116 0.871462 22180 1 76 0.00415774 179 0 8.4718e+07 0.0190559 714896 8.55637e+07 4.3692e+06 22188 4.20776e+07 0 0.109137 0.990116 0.862848 8.4718e+07 0.00585859 1.83688e+07 7.27067e+06 1.85881e+07 188 1.85809e+07 1.6868e+07 0.00500502 1.86612e+07 50.1078 0.00835513 0.993778 0 50.2967 GTEX-13D11-1926-SM-5IFGB 1 B1 6 pieces, squamous mucosa is ~0.5mm, ~20-25% thickness 7.6 Esophagus Esophagus - Mucosa 0006920 149 1136 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988364 235911 0.976191 0.991662 0.832041 22715 1 76 0.00238485 176 0 7.92045e+07 0.0232018 470715 7.98704e+07 9.79442e+06 22733 3.93776e+07 0 0.144151 0.991662 0.825103 7.92045e+07 0.00362229 1.78308e+07 1.12513e+07 1.78128e+07 184 1.78651e+07 1.64987e+07 0.00300151 1.80318e+07 50.2322 0.00589348 0.99496 0 49.9747 GTEX-13D11-2026-SM-5IJBK 1 B1 6 pieces, all muscularis, good specimens 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 154 1131 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990279 175417 0.976281 0.992925 0.835167 22383 1 76 0.00216219 167 0 6.97615e+07 0.0233988 496536 7.02586e+07 9.66136e+06 22396 3.47078e+07 0 0.141114 0.992925 0.829258 6.97615e+07 0.00366572 1.5218e+07 6.66045e+06 1.52595e+07 166 1.52378e+07 1.28265e+07 0.00291195 1.54155e+07 50.2898 0.00706726 0.995571 0 50.0681 GTEX-13D11-2126-SM-5IFH2 1 B1 6 pieces, mucosa well preserved, up to ~1mm thick, 50-100% thickness 7.5 Stomach Stomach 0000945 159 1126 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987944 195731 0.978831 0.990324 0.839027 22936 1 76 0.00233839 273 0 8.11303e+07 0.0202994 1.14694e+06 8.1923e+07 9.38766e+06 22958 4.03581e+07 0 0.139804 0.990324 0.830909 8.11303e+07 0.00360708 1.84919e+07 5.77197e+07 1.86902e+07 215 1.86739e+07 1.91698e+07 0.00297121 1.86934e+07 50.0262 0.0140002 0.992704 0 50.2667 GTEX-13D11-2226-SM-5IFEO 1 B1 2 pieces, centrally approaching score 2 for autolysis; Islets fairly well preserved, but rare, encircled (rep) 7.2 Pancreas Pancreas 0001150 162 1123 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987802 256374 0.974098 0.990866 0.835168 22647 1 76 0.00233783 130 0 8.39694e+07 0.0254378 316152 8.47435e+07 9.52664e+06 22668 4.17538e+07 0 0.138931 0.990866 0.827539 8.39694e+07 0.00375959 1.91149e+07 1.95807e+07 1.93053e+07 144 1.93228e+07 2.25763e+07 0.00304651 1.93549e+07 50.0415 0.00373069 0.99393 0 50.2478 GTEX-13D11-2326-SM-5IJCY 1 B1 2 pieces~5% fibrofascial tissue, delineated, 8 Adipose Tissue Adipose - Subcutaneous 0002190 164 1121 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990672 175804 0.975163 0.993018 0.806818 22222 1 76 0.0022736 142 0 6.85629e+07 0.0245365 459318 6.9045e+07 8.62053e+06 22239 3.4122e+07 0 0.168345 0.993018 0.801185 6.85629e+07 0.00385035 1.51108e+07 7.15144e+06 1.50998e+07 160 1.50927e+07 1.16245e+07 0.00306011 1.52691e+07 50.2905 0.00665245 0.995364 0 49.9818 GTEX-13D11-2426-SM-5KM1V 0 B1 6 pieces, no signifcnt dermal fat, squamous epithelium is ~55-60 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 166 1119 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984762 149457 0.974939 0.987975 0.828686 22861 1 76 0.00389771 170 0 6.91941e+07 0.0248208 417050 7.00362e+07 3.48878e+06 22881 3.43727e+07 0 0.146253 0.987975 0.818721 6.91941e+07 0.00534097 1.50998e+07 6.48406e+06 1.52257e+07 159 1.52564e+07 1.21556e+07 0.00461699 1.5283e+07 50.0436 0.00595478 0.991189 0 50.2077 GTEX-13D11-2526-SM-5KM28 0 B1 2 pieces, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 169 1116 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.989078 132775 0.983566 0.991241 0.870549 20243 1 76 0.00363739 216 0 7.92636e+07 0.0162194 1.09718e+06 7.9964e+07 3.63463e+06 20251 3.94527e+07 0 0.113016 0.991241 0.862924 7.92636e+07 0.00459541 1.7411e+07 1.0636e+07 1.74477e+07 212 1.74695e+07 1.54002e+07 0.00411535 1.75464e+07 50.1097 0.0137209 0.993404 0 50.0526 GTEX-13D11-2626-SM-5IJDB 0 B1 4 pieces, rim of trace fat up to ~1mm, delineated 7.4 Nerve Nerve - Tibial 0001323 174 1111 BP-45499 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.986727 194237 0.969027 0.990502 0.751223 23649 1 76 0.00227766 145 0 6.878e+07 0.0306413 196399 6.94395e+07 9.83204e+06 23674 3.41576e+07 0 0.217804 0.990502 0.744088 6.878e+07 0.00411823 1.51251e+07 6.69156e+06 1.51982e+07 152 1.52105e+07 1.09295e+07 0.00319444 1.53642e+07 50.2513 0.00282835 0.994276 0 50.1207 GTEX-13D11-2726-SM-5K7V7 0 B1 4 pieces, adherent fat, excellent specimens 6.6 Blood Vessel Artery - Tibial 0007610 175 1110 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984705 310289 0.977654 0.987334 0.859241 23162 1 76 0.00419384 217 0 1.01657e+08 0.0218648 341533 1.02961e+08 6.64126e+06 23175 5.05303e+07 0 0.118414 0.987334 0.848357 1.01657e+08 0.004679 2.19731e+07 8.20309e+06 2.21362e+07 250 2.21753e+07 2.23128e+07 0.00443577 2.2194e+07 50.0211 0.00331711 0.989963 0 50.1849 GTEX-13D11-5007-SM-AN3YX B1 Heart Heart - Left Ventricle 0006566 140 ChIP-Seq GTEX-13D11-5019-SM-AN3YZ B1 Muscle Muscle - Skeletal 0011907 171 ChIP-Seq GTEX-13FH7-0004-SM-5DU3O B1 Blood Whole Blood 0013756 -139 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FH7-0004-SM-5HJPL B1 Blood Whole Blood 0013756 -139 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FH7-0004-SM-6WSB3 B1 Blood Whole Blood 0013756 -139 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-6066,LCSET-6302 10/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FH7-0008-SM-5ZZUJ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 256 BP-46000 RNA isolation_Trizol Manual (Cell Pellet) 11/20/2013 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994253 237981 0.980838 0.995449 0.854693 19973 1 76 0.00174336 166 0 7.4637e+07 0.0188551 318687 7.49782e+07 6.57577e+06 19985 3.72198e+07 0 0.126145 0.995449 0.850803 7.4637e+07 0.00281696 1.6818e+07 8.61537e+06 1.68884e+07 160 1.6888e+07 1.94206e+07 0.00227952 1.691e+07 50.0325 0.00425039 0.996646 0 50.1044 GTEX-13FH7-0126-SM-5KLZ1 0 B1 2 pieces; several lymphocytic aggregates, ? Hashimoto thyroiditis 7.4 Thyroid Thyroid 0002046 97 888 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98715 169960 0.969641 0.989402 0.766763 25130 1 76 0.00413184 207 0 9.26335e+07 0.0291593 473484 9.36257e+07 4.41388e+06 25169 4.60271e+07 0 0.202877 0.989402 0.758638 9.26335e+07 0.00507808 2.03785e+07 9.37205e+06 2.04833e+07 207 2.05347e+07 1.5988e+07 0.00460388 2.05228e+07 49.9855 0.0050572 0.991655 0 50.1283 GTEX-13FH7-0226-SM-5IFGG 0 B1 2 pieces; 5-10% attached fat on both 8.7 Adrenal Gland Adrenal Gland 0002369 109 876 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989598 217587 0.977878 0.99306 0.841834 22206 1 76 0.00221762 161 0 7.31717e+07 0.0218339 1.88325e+06 7.3683e+07 9.03053e+06 22216 3.63912e+07 0 0.136044 0.99306 0.835992 7.31717e+07 0.00353239 1.62029e+07 9.61786e+06 1.61688e+07 175 1.62489e+07 1.41424e+07 0.00287271 1.63546e+07 50.1622 0.0255588 0.996522 0 49.9474 GTEX-13FH7-0326-SM-5J1MR 1 B1 6 pieces; intimal thickening 7.6 Blood Vessel Artery - Aorta 0001496 114 871 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988764 164726 0.978706 0.990408 0.854812 21889 1 76 0.00381875 210 0 8.87029e+07 0.0209063 416424 8.9562e+07 4.62589e+06 21914 4.41449e+07 0 0.123894 0.990408 0.846613 8.87029e+07 0.00439629 1.92995e+07 6.54994e+06 1.94372e+07 220 1.94131e+07 1.81657e+07 0.00410704 1.94656e+07 50.0675 0.00464956 0.992051 0 50.1778 GTEX-13FH7-0426-SM-5KM4M 0 B1 2 pieces; calcific atherosclerosis, one piece is fragmented due to calcification, second has 50-75% narrowing of lumen 6.8 Blood Vessel Artery - Coronary 0001621 121 864 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987505 243727 0.973602 0.98988 0.845241 22469 1 76 0.00312857 143 0 7.14093e+07 0.0260297 384758 7.21393e+07 4.69128e+06 22485 3.55128e+07 0 0.128361 0.98988 0.836688 7.14093e+07 0.00421042 1.54444e+07 6.88165e+06 1.56446e+07 164 1.56117e+07 1.36875e+07 0.0036682 1.56439e+07 50.0515 0.00533354 0.992255 0 50.3219 GTEX-13FH7-0526-SM-5IJF8 0 B1 5 pieces; includes fragments of vegetable matter 10 Esophagus Esophagus - Mucosa 0006920 119 866 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986683 252101 0.977731 0.988422 0.832555 23017 1 76 0.00462514 167 0 8.29594e+07 0.0218669 512217 8.39311e+07 5.49645e+06 23034 4.1261e+07 0 0.145176 0.988422 0.822916 8.29594e+07 0.00487456 1.86821e+07 1.18653e+07 1.87638e+07 169 1.88102e+07 1.7255e+07 0.00474963 1.87797e+07 49.9594 0.00610282 0.99016 0 50.1091 GTEX-13FH7-0626-SM-5KLZD 0 B1 5 pieces; well trimmed 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 126 859 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987266 171909 0.977153 0.989773 0.844438 22191 1 76 0.00373445 210 0 8.77587e+07 0.0225633 969539 8.86654e+07 4.06821e+06 22206 4.36468e+07 0 0.132715 0.989773 0.835802 8.77587e+07 0.00473761 1.89463e+07 7.44207e+06 1.90869e+07 233 1.90746e+07 1.63845e+07 0.00423476 1.91653e+07 50.1187 0.0109348 0.99228 0 50.1848 GTEX-13FH7-0726-SM-5J2NK 0 B1 4 pieces; well trimmed, 2 include significant nerve and vessels 7.5 Esophagus Esophagus - Muscularis 0004648 122 863 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985306 228696 0.978738 0.988939 0.848038 22978 1 76 0.00433423 213 0 9.08709e+07 0.0209432 948985 9.18873e+07 5.07535e+06 22992 4.51254e+07 0 0.130701 0.988939 0.838657 9.08709e+07 0.00594775 1.96068e+07 7.84456e+06 1.97435e+07 204 1.97931e+07 1.74161e+07 0.00513802 1.98618e+07 50.0867 0.0103277 0.992571 0 50.1737 GTEX-13FH7-0826-SM-5J2NW 0 B1 2 pieces; ~10% fibrous/fatty 7.5 Heart Heart - Atrial Appendage 0006631 129 856 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984548 133193 0.979592 0.988619 0.855218 20934 1 76 0.00420734 108 0 6.17044e+07 0.0200959 1.40993e+06 6.24147e+07 3.33614e+06 20944 3.06504e+07 0 0.124374 0.988619 0.845485 6.17044e+07 0.00586695 1.33217e+07 7.02235e+06 1.34199e+07 132 1.34333e+07 1.12526e+07 0.00503373 1.35258e+07 50.1716 0.0225897 0.992691 0 50.1836 GTEX-13FH7-0926-SM-5J2MR 1 B1 2 pieces; minimal internal fat 8.1 Heart Heart - Left Ventricle 0006566 134 851 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984917 201330 0.985779 0.988942 0.872214 20993 1 76 0.00430441 267 0 9.22809e+07 0.0139575 2.79037e+06 9.33127e+07 5.07634e+06 21003 4.58406e+07 0 0.113565 0.988942 0.862569 9.22809e+07 0.00598093 2.02989e+07 1.75818e+07 2.03446e+07 256 2.02613e+07 1.63848e+07 0.00513926 2.06984e+07 50.5336 0.0299034 0.992967 0 50.0563 GTEX-13FH7-1026-SM-5IJGF 1 B1 6 pieces; 5 are full thickness, well preserved, but with some sloughing of superficial glands 7 Stomach Stomach 0000945 130 855 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985549 178194 0.98089 0.987417 0.845938 23375 1 76 0.00462199 327 0 9.18513e+07 0.0188734 1.86473e+06 9.30217e+07 6.38086e+06 23396 4.56875e+07 0 0.134952 0.987417 0.835293 9.18513e+07 0.0049136 2.05795e+07 5.71003e+07 2.10014e+07 257 2.09841e+07 1.88124e+07 0.00476752 2.07598e+07 49.7313 0.0200462 0.989286 0 50.5073 GTEX-13FH7-1126-SM-5K7UG 1 B1 5 pieces; well trimmed 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 132 853 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987383 182869 0.971603 0.989685 0.79621 24247 1 76 0.00435245 181 0 8.31798e+07 0.028205 1.35618e+06 8.40467e+07 5.46381e+06 24274 4.13562e+07 0 0.175393 0.989685 0.787997 8.31798e+07 0.0049219 1.82779e+07 8.73537e+06 1.84161e+07 190 1.83832e+07 1.29025e+07 0.00463651 1.8497e+07 50.1542 0.0161361 0.991988 0 50.1884 GTEX-13FH7-1226-SM-5IJFK 1 B1 5 pieces; excellent specimen, mucosa only with prominent lymphoid component 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 138 847 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985599 253660 0.965111 0.987274 0.759526 26149 1 76 0.0049689 276 0 1.08085e+08 0.0343862 1.29699e+06 1.09479e+08 6.9973e+06 26196 5.37327e+07 0 0.205585 0.987274 0.74986 1.08085e+08 0.00515065 2.37598e+07 1.26553e+07 2.39758e+07 267 2.39603e+07 1.64876e+07 0.00505962 2.39488e+07 49.9879 0.011847 0.988949 0 50.2262 GTEX-13FH7-1326-SM-5IFG8 1 B1 2 pieces 8.1 Spleen Spleen 0002106 136 849 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987509 316609 0.963579 0.990505 0.761781 24259 1 76 0.00287245 139 0 7.02566e+07 0.0353081 431160 7.09301e+07 7.88698e+06 24289 3.48989e+07 0 0.201798 0.990505 0.754548 7.02566e+07 0.00432056 1.54276e+07 1.04945e+07 1.55209e+07 150 1.55783e+07 1.14445e+07 0.00359431 1.55715e+07 49.9891 0.00607866 0.993501 0 50.1507 GTEX-13FH7-1426-SM-5IFIC 1 B1 2 pieces; 20 and 40% fat, islets well visualized, mild fibrosis 6.4 Pancreas Pancreas 0001150 143 842 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989391 369804 0.961262 0.991533 0.807637 22998 1 76 0.00318338 135 0 8.57313e+07 0.038482 525600 8.64635e+07 6.7312e+06 23017 4.26502e+07 0 0.153625 0.991533 0.800799 8.57313e+07 0.00413135 1.91566e+07 1.96991e+07 1.93821e+07 147 1.93413e+07 2.04676e+07 0.00365634 1.93882e+07 50.0605 0.00607887 0.993674 0 50.2925 GTEX-13FH7-1526-SM-5J2N6 1 B1 6 pieces; all full thickness, but mucosa is limited in some 8.1 Colon Colon - Transverse 0001157 140 845 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984016 163815 0.976691 0.988007 0.846386 22399 1 76 0.00427311 216 0 8.88022e+07 0.0230626 1.04011e+06 8.98802e+07 5.07721e+06 22420 4.41012e+07 0 0.130305 0.988007 0.836235 8.88022e+07 0.00593987 1.90555e+07 7.60981e+06 1.92236e+07 203 1.92602e+07 1.65655e+07 0.00510312 1.93405e+07 50.104 0.0115722 0.991999 0 50.2196 GTEX-13FH7-1626-SM-5J2O9 0 B1 5 pieces; muscularis and submucosa, 2 with residual strips of mucosa 7.1 Colon Colon - Sigmoid 0001159 145 840 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985878 216440 0.978125 0.98969 0.851974 22028 1 76 0.0042565 141 0 7.2383e+07 0.0215709 923902 7.3137e+07 3.82279e+06 22042 3.59413e+07 0 0.12615 0.98969 0.84319 7.2383e+07 0.00595006 1.56354e+07 6.16617e+06 1.57699e+07 154 1.58109e+07 1.35822e+07 0.00510002 1.585e+07 50.0619 0.0126325 0.993503 0 50.2141 GTEX-13FH7-1726-SM-5IJE7 1 B1 2 pieces; extensive pneumonia with evidence of aspiration/degenerating animal and vegetable matter (marked) 7.2 Lung Lung 0008952 148 837 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.988029 164746 0.977728 0.989669 0.82514 24812 1 76 0.00469782 211 0 9.74493e+07 0.0218619 737769 9.84665e+07 6.64189e+06 24840 4.84661e+07 0 0.152588 0.989669 0.816616 9.74493e+07 0.00487676 2.15701e+07 8.73881e+06 2.17971e+07 244 2.1799e+07 1.86112e+07 0.00478714 2.17237e+07 49.9135 0.00749259 0.991309 0 50.2617 GTEX-13FH7-1926-SM-5J2OL 1 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 152 833 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985222 192435 0.979748 0.989107 0.858036 22484 1 76 0.00421255 211 0 9.34994e+07 0.0199897 1.36593e+06 9.45291e+07 5.07232e+06 22498 4.64385e+07 0 0.121712 0.989107 0.848689 9.34994e+07 0.00591675 2.06437e+07 8.66173e+06 2.0819e+07 240 2.08496e+07 1.6711e+07 0.0050613 2.09511e+07 50.1214 0.0144498 0.992991 0 50.2114 GTEX-13FH7-2026-SM-5IJCR 1 B1 6 pieces; well trimmed, epidermis measures 32 microns, focal parakeratosis 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 256 729 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 EXCLUDE 0.987585 218698 0.970767 0.990875 0.799121 23168 1 76 0.00230057 172 0 6.72391e+07 0.0290099 719023 6.78583e+07 9.26046e+06 23192 3.3416e+07 0 0.171646 0.990875 0.791829 6.72391e+07 0.004116 1.46976e+07 7.5322e+06 1.47416e+07 163 1.47442e+07 1.07977e+07 0.00320527 1.49099e+07 50.2795 0.010596 0.994165 0 50.0747 GTEX-13FH7-2026-SM-E9J4I 1 B1 6 pieces; well trimmed, epidermis measures 32 microns, focal parakeratosis 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 256 729 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.980692 507367 0.96689 0.981798 0.768452 23874 1 76 0.00194449 207 0 8.14161e+07 0.0329024 1.01502e+06 8.29255e+07 4.36933e+06 23903 4.05353e+07 0 0.198438 0.981798 0.754465 8.14161e+07 0.00291564 1.77886e+07 8.80239e+06 1.79573e+07 206 1.78711e+07 1.19537e+07 0.00242952 1.79682e+07 50.1355 0.0122401 0.982904 0 50.2359 GTEX-13FH7-2126-SM-5L3DJ 0 B1 2 pieces; includes 5-10% attached and internal fat 8.7 Muscle Muscle - Skeletal 0011907 261 724 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989057 208275 0.984275 0.992695 0.881474 18505 1 76 0.00299182 139 0 6.61378e+07 0.0155155 1.21125e+06 6.66245e+07 7.09327e+06 18509 3.28918e+07 0 0.102801 0.992695 0.875035 6.61378e+07 0.00373562 1.46272e+07 9.50059e+06 1.45441e+07 156 1.45779e+07 1.36147e+07 0.00336236 1.48114e+07 50.3973 0.0181802 0.996334 0 49.8576 GTEX-13FH7-2226-SM-5IJD4 1 B1 2 pieces; ~10% is fibrous, few foci of skeletal muscle 8.2 Adipose Tissue Adipose - Subcutaneous 0002190 264 721 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98989 172587 0.978564 0.992819 0.844016 21523 1 76 0.00223121 146 0 6.34709e+07 0.0211107 479500 6.393e+07 8.16166e+06 21541 3.15709e+07 0 0.134549 0.992819 0.837955 6.34709e+07 0.00380048 1.40515e+07 6.41588e+06 1.41278e+07 153 1.41416e+07 1.19021e+07 0.00301353 1.42174e+07 50.1338 0.00750039 0.995747 0 50.1355 GTEX-13FH7-2326-SM-5KM1E 1 B1 2 pieces; calcific atherosclerosis and medial calcification 6.5 Blood Vessel Artery - Tibial 0007610 266 719 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986001 166340 0.969958 0.988673 0.811075 22565 1 76 0.00392996 156 0 7.83849e+07 0.0297244 367473 7.92829e+07 3.71356e+06 22585 3.89331e+07 0 0.158883 0.988673 0.801888 7.83849e+07 0.00517741 1.69035e+07 5.58518e+06 1.70509e+07 167 1.70764e+07 1.44617e+07 0.004552 1.70736e+07 49.996 0.00463496 0.991346 0 50.217 GTEX-13FH7-2426-SM-5K7US 0 B1 2 pieces; ~10% attached fat/fibroadipose tissue 7.2 Nerve Nerve - Tibial 0001323 267 718 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987357 164627 0.969717 0.989581 0.763918 23716 1 76 0.00435962 156 0 7.69214e+07 0.0300473 446934 7.77313e+07 5.08392e+06 23747 3.8239e+07 0 0.205799 0.989581 0.755959 7.69214e+07 0.0048901 1.69061e+07 6.76371e+06 1.70342e+07 158 1.70444e+07 1.22147e+07 0.00462426 1.70627e+07 50.0268 0.00574973 0.991805 0 50.1888 GTEX-13FH7-5007-SM-AN3Z1 B1 Heart Heart - Left Ventricle 0006566 134 ChIP-Seq GTEX-13FH7-5019-SM-AN3Z3 B1 Muscle Muscle - Skeletal 0011907 262 ChIP-Seq GTEX-13FHO-0003-SM-5DU53 C1 Blood Whole Blood 0013756 471 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FHO-0003-SM-5HJQE C1 Blood Whole Blood 0013756 471 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FHO-0003-SM-6WSAZ C1 Blood Whole Blood 0013756 471 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-6066 11/08/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FHO-0011-R10a-SM-AHZMN C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 485 ChIP-Seq GTEX-13FHO-0011-R10b-SM-5J2MM C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 485 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984298 643688 0.959455 0.988248 0.824959 25582 1 76 0.00435769 271 0 1.11835e+08 0.0400012 2.52914e+06 1.13165e+08 6.13674e+06 25608 5.54971e+07 0 0.134496 0.988248 0.815264 1.11835e+08 0.0060005 2.43208e+07 2.05886e+07 2.44771e+07 322 2.45708e+07 1.55405e+07 0.00517581 2.46302e+07 50.0604 0.022349 0.992198 0 50.1601 GTEX-13FHO-0011-R10b-SM-CYKPF C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 485 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 RIP-Seq GTEX-13FHO-0011-R11b-SM-5LZYQ C1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 485 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.987719 431616 0.939939 0.988751 0.718945 22729 1 76 0.00355503 127 0 6.44871e+07 0.0596908 922398 6.52208e+07 3.63116e+06 22753 3.20254e+07 0 0.220995 0.988751 0.710857 6.44871e+07 0.00403428 1.38542e+07 1.23303e+07 1.39079e+07 147 1.39365e+07 7.48741e+06 0.00379441 1.38989e+07 49.9324 0.0141427 0.989782 0 50.0967 GTEX-13FHO-0011-R1b-SM-5KLZG C1, A1 7.2 Brain Brain - Hippocampus 0001954 485 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987962 483206 0.958986 0.990267 0.813868 24765 1 76 0.00397204 271 0 8.60875e+07 0.0407443 5.95174e+06 8.69337e+07 4.02369e+06 24796 4.28035e+07 0 0.145118 0.990267 0.805947 8.60875e+07 0.00502658 1.87008e+07 2.23132e+07 1.89907e+07 271 1.89185e+07 9.12454e+06 0.00449808 1.89449e+07 50.0348 0.068463 0.992572 0 50.3846 GTEX-13FHO-0011-R3b-SM-5K7YA C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 485 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991305 470794 0.962654 0.993672 0.836949 23101 1 76 0.00270975 198 0 7.45866e+07 0.0369109 3.86328e+06 7.50616e+07 1.45292e+07 23121 3.71285e+07 0 0.125705 0.993672 0.831653 7.45866e+07 0.00384292 1.64222e+07 2.06402e+07 1.62878e+07 244 1.62843e+07 9.02070e+06 0.00327498 1.65927e+07 50.469 0.0514681 0.99604 0 49.7946 GTEX-13FHO-0011-R5b-SM-5LZZ3 C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 485 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990225 744609 0.946432 0.991248 0.800586 22863 1 76 0.00335712 133 0 6.00129e+07 0.0532306 2.04032e+06 6.05428e+07 3.35603e+06 22879 2.98153e+07 0 0.145846 0.991248 0.79358 6.00129e+07 0.00385537 1.2943e+07 1.82741e+07 1.30624e+07 158 1.30174e+07 7.06032e+06 0.00360599 1.30667e+07 50.0945 0.0337005 0.992272 0 50.2296 GTEX-13FHO-0011-R6b-SM-5LZX1 C1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 485 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99105 388887 0.96333 0.992103 0.831214 22965 1 76 0.00336825 267 0 7.94812e+07 0.0364681 6.34246e+06 8.01138e+07 4.43379e+06 22980 3.95556e+07 0 0.132116 0.992103 0.82465 7.94812e+07 0.0037184 1.73201e+07 2.10813e+07 1.75212e+07 277 1.74734e+07 7.29596e+06 0.00354314 1.74479e+07 49.9635 0.0791681 0.993156 0 50.2885 GTEX-13FHO-0011-R7b-SM-5LZXD C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 485 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989524 330333 0.962052 0.990517 0.837827 22816 1 76 0.00334286 201 0 7.25911e+07 0.0377474 5.95496e+06 7.3286e+07 4.05039e+06 22831 3.61121e+07 0 0.124225 0.990517 0.829882 7.25911e+07 0.00378211 1.59632e+07 1.56689e+07 1.61358e+07 235 1.60257e+07 6.91104e+06 0.00356226 1.61402e+07 50.1779 0.0812564 0.99151 0 50.2689 GTEX-13FHO-0226-SM-5IFGY 1 C1 6 pieces; predominantly well trimmed, but with 5-20% internal (mostly) and attached fat, epidermis measures 32 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 631 514 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986215 450290 0.964683 0.990532 0.792498 24183 1 76 0.00222957 171 0 7.43715e+07 0.035098 389177 7.50824e+07 8.94291e+06 24202 3.68956e+07 0 0.172185 0.990532 0.784995 7.43715e+07 0.00407883 1.61577e+07 1.20718e+07 1.62236e+07 177 1.62358e+07 1.2255e+07 0.00315017 1.64664e+07 50.3527 0.00518333 0.994849 0 50.1018 GTEX-13FHO-0326-SM-5IJBH 1 C1 2 pieces; 20% of one and 50% of second is fibrous and vascular tissue with some sweat glands 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 634 512 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990425 275535 0.972729 0.992901 0.777452 23763 1 76 0.00227314 170 0 8.28104e+07 0.0269984 301016 8.34025e+07 1.08686e+07 23798 4.11977e+07 0 0.195278 0.992901 0.771932 8.28104e+07 0.00373896 1.82076e+07 9.04481e+06 1.8304e+07 189 1.83142e+07 1.44895e+07 0.00300422 1.83964e+07 50.112 0.0036092 0.995376 0 50.132 GTEX-13FHO-0426-SM-5L3F5 1 C1 6 pieces; relatively well trimmed, few pieces with ~10% internal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 647 499 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987357 228141 0.976217 0.991521 0.778146 21605 1 76 0.00323019 147 0 5.70376e+07 0.0235383 234182 5.75253e+07 5.96277e+06 21625 2.83296e+07 0 0.198071 0.991521 0.771548 5.70376e+07 0.00434876 1.2509e+07 6.95045e+06 1.25608e+07 127 1.26255e+07 9.49396e+06 0.00378713 1.26668e+07 50.0817 0.00407094 0.995685 0 50.1034 GTEX-13FHO-0526-SM-5K7VS 1 C1 2 pieces; both are partially encased in fat, up to 2mm (20% and 40% internal and external fat combined) 6.3 Nerve Nerve - Tibial 0001323 663 484 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984456 212231 0.960973 0.986972 0.688185 24294 1 76 0.00459314 155 0 8.02952e+07 0.0388126 247671 8.1355e+07 5.55527e+06 24329 3.98775e+07 0 0.272788 0.986972 0.67922 8.02952e+07 0.00527897 1.75419e+07 9.18817e+06 1.76265e+07 152 1.76622e+07 1.05993e+07 0.00493518 1.77022e+07 50.0565 0.00304432 0.989489 0 50.1203 GTEX-13FHO-0726-SM-5IJDG 1 C1 2 pieces; ~20% of one is internal fat, second piece has large central defect (? fatty), scattered atrophic fibers 7.5 Muscle Muscle - Skeletal 0011907 673 475 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991237 185201 0.981994 0.993848 0.869552 19799 1 76 0.00211136 158 0 7.02192e+07 0.0177998 845101 7.06539e+07 9.52421e+06 19809 3.4949e+07 0 0.112443 0.993848 0.864202 7.02192e+07 0.00353701 1.5415e+07 9.48241e+06 1.54928e+07 177 1.54391e+07 1.33194e+07 0.00282231 1.56353e+07 50.3158 0.0119611 0.996459 0 50.126 GTEX-13FHO-0826-SM-5L3E8 1 C1 2 pieces; ~20 and 60% fat, remainder is fibrous tissue and ducts with mild gynecomastoid change 6.3 Breast Breast - Mammary Tissue 0008367 690 458 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987325 228752 0.971747 0.991455 0.799873 23609 1 76 0.00315269 137 0 6.73612e+07 0.0280061 255778 6.79418e+07 6.82599e+06 23638 3.3452e+07 0 0.171874 0.991455 0.793038 6.73612e+07 0.0042625 1.48051e+07 8.16741e+06 1.48297e+07 149 1.48775e+07 1.23074e+07 0.00370528 1.50213e+07 50.2404 0.00376466 0.995586 0 50.0416 GTEX-13FHO-0926-SM-5N9EW 2 C1 2 pieces; features of multinodular goiter 5.7 Thyroid Thyroid 0002046 700 449 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987828 428002 0.9627 0.989228 0.741067 25070 1 76 0.00404857 206 0 9.76893e+07 0.0370331 191911 9.8753e+07 5.11286e+06 25110 4.85469e+07 0 0.221633 0.989228 0.733084 9.76893e+07 0.00402408 2.13388e+07 1.51575e+07 2.138e+07 227 2.13561e+07 1.55663e+07 0.00403634 2.14998e+07 50.1677 0.00194334 0.990629 0 50.0482 GTEX-13FHO-1026-SM-5KM1Q 1 C1 2 pieces; includes pleura (target is 1 cm below pleura), some mild emphysematous change 6 Lung Lung 0008952 705 444 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.979835 198907 0.971753 0.98299 0.760253 23637 1 76 0.00421719 131 0 7.0704e+07 0.0279446 255155 7.19275e+07 3.56831e+06 23668 3.50602e+07 0 0.2115 0.98299 0.747321 7.0704e+07 0.00565917 1.55798e+07 9.60376e+06 1.57021e+07 147 1.57358e+07 1.12482e+07 0.00493586 1.57645e+07 50.0455 0.00354739 0.986146 0 50.1955 GTEX-13FHO-1026-SM-CYKRK 1 C1 2 pieces; includes pleura (target is 1 cm below pleura), some mild emphysematous change 6 Lung Lung 0008952 705 444 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 RIP-Seq GTEX-13FHO-1226-SM-5L3EF 1 C1 2 pieces; ~20% of one is fibrous, small contaminating fragment of spleen 7.4 Heart Heart - Atrial Appendage 0006631 710 441 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989187 198014 0.980406 0.992867 0.829019 20703 1 76 0.00307632 124 0 6.6743e+07 0.0193507 1.52746e+06 6.72225e+07 7.03129e+06 20718 3.31846e+07 0 0.151387 0.992867 0.823106 6.6743e+07 0.00380052 1.41975e+07 1.06903e+07 1.40098e+07 160 1.41568e+07 1.02042e+07 0.00343708 1.4274e+07 50.206 0.0227224 0.996547 0 49.6673 GTEX-13FHO-1626-SM-5IJGB 1 C1 6 pieces, calcific atherosclerosis 5.9 Blood Vessel Artery - Aorta 0001496 724 429 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.983791 272878 0.970621 0.986022 0.770517 24433 1 76 0.00496269 214 0 1.12082e+08 0.0290413 243624 1.13671e+08 7.79889e+06 24471 5.55844e+07 0 0.200104 0.986022 0.759747 1.12082e+08 0.00543422 2.41973e+07 9.48909e+06 2.43583e+07 239 2.4384e+07 1.95258e+07 0.00519792 2.44199e+07 50.0368 0.00214324 0.988253 0 50.1657 GTEX-13FHO-1726-SM-5IFGM 1 C1 6 pieces; congested, few clusters of submucosal glands 8.2 Esophagus Esophagus - Mucosa 0006920 732 421 BP-46589 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4813 03/05/2014 TruSeq.v1 EXCLUDE 0.987472 329787 0.968823 0.991178 0.757554 24221 1 76 0.00237738 166 0 7.71162e+07 0.0309112 199803 7.78025e+07 8.53709e+06 24253 3.83e+07 0 0.211269 0.991178 0.750871 7.71162e+07 0.00407552 1.71488e+07 1.04648e+07 1.71595e+07 167 1.72248e+07 1.3219e+07 0.00322328 1.73686e+07 50.2079 0.00256808 0.994884 0 50.0155 GTEX-13FHO-1726-SM-DPRZX 1 C1 6 pieces; congested, few clusters of submucosal glands 8.2 Esophagus Esophagus - Mucosa 0006920 732 421 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.993555 229891 0.974275 0.994477 0.782812 23197 1 76 0.00275288 168 0 7.89362e+07 0.0254176 151606 7.93745e+07 3.79703e+06 23218 3.93459e+07 0 0.191462 0.994477 0.778489 7.89362e+07 0.00263983 1.77007e+07 9.96904e+06 1.78262e+07 169 1.78188e+07 1.58147e+07 0.00269641 1.778e+07 49.9456 0.00191001 0.995399 0 50.1767 GTEX-13FHO-1826-SM-5K7Y6 1 C1 6 pieces; muscularis with some residual attached fat and nerve 6.3 Esophagus Esophagus - Muscularis 0004648 733 421 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.984536 998609 0.966264 0.987673 0.758615 23012 1 76 0.00287892 125 0 6.32362e+07 0.0335517 545940 6.40255e+07 1.2603e+07 23036 3.13131e+07 0 0.207649 0.987673 0.749264 6.32362e+07 0.00423884 1.37954e+07 7.17318e+06 1.36048e+07 144 1.39906e+07 8.6777e+06 0.00355672 1.35949e+07 49.2828 0.00852692 0.99081 0 49.6522 GTEX-13FHO-2026-SM-5J1OA 1 C1 2 pieces 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 735 420 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.980032 183160 0.97207 0.982017 0.80107 23862 1 76 0.00415701 161 0 8.64414e+07 0.0276161 215750 8.80244e+07 5.46684e+06 23887 4.29041e+07 0 0.171001 0.982017 0.786664 8.64414e+07 0.00503837 1.89509e+07 1.05223e+07 1.91084e+07 185 1.9114e+07 1.56396e+07 0.0045968 1.91204e+07 50.0084 0.00245103 0.984003 0 50.207 GTEX-13FHO-2726-SM-5K7VG 1 C1 6 pieces; well trimmed 6.7 Colon Colon - Sigmoid 0001159 757 402 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985278 217605 0.969701 0.987845 0.788873 24188 1 76 0.00448313 199 0 9.45898e+07 0.030048 537395 9.57537e+07 6.59715e+06 24221 4.69934e+07 0 0.180829 0.987845 0.779284 9.45898e+07 0.00509092 2.04086e+07 9.13641e+06 2.0576e+07 203 2.05819e+07 1.60722e+07 0.00478624 2.06396e+07 50.07 0.00561226 0.990412 0 50.2042 GTEX-13FHO-2826-SM-5K7ZA 2 C1 2 pieces; sloughing of glandular epithelium, transitional metaplasia, focus of seminal vesicle 6 Prostate Prostate 0002367 764 396 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988585 294982 0.958241 0.991096 0.704336 25044 1 76 0.0028312 134 0 7.02567e+07 0.0415397 474910 7.08878e+07 1.17741e+07 25090 3.49252e+07 0 0.253906 0.991096 0.698064 7.02567e+07 0.00411277 1.52907e+07 1.01698e+07 1.53677e+07 147 1.5404e+07 9.87521e+06 0.00347036 1.54295e+07 50.0415 0.00669946 0.993608 0 50.1256 GTEX-13FHO-2926-SM-5L3ES 1 C1 4 pieces (fragmented); Purkinje cells well visualized, no evidence of hypoxic damage 7.3 Brain Brain - Cerebellum 0002037 791 369 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985736 343565 0.945365 0.989915 0.709989 23245 1 76 0.00353723 111 0 6.54522e+07 0.0542913 876684 6.6119e+07 7.38956e+06 23269 3.24912e+07 0 0.235376 0.989915 0.702829 6.54522e+07 0.00442465 1.4163e+07 1.3423e+07 1.41713e+07 138 1.42569e+07 7.91493e+06 0.00397907 1.43244e+07 50.1181 0.0132592 0.994094 0 50.0147 GTEX-13FHO-3026-SM-5J1O9 2 C1 4 pieces; mild to focally moderate autolysis 6.8 Brain Brain - Cortex 0001870 793 368 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986505 263335 0.963575 0.988508 0.819356 24536 1 76 0.0040648 203 0 8.49123e+07 0.0360362 1.9385e+06 8.58995e+07 4.67557e+06 24564 4.2209e+07 0 0.144219 0.988508 0.809939 8.49123e+07 0.00484518 1.86462e+07 9.90707e+06 1.87967e+07 231 1.87458e+07 1.15191e+07 0.0044542 1.88566e+07 50.1473 0.0225671 0.990511 0 50.201 GTEX-13FHO-3126-SM-5IJF6 2 C1 1 piece; adenohypophysis 7 Pituitary Pituitary 0000007 794 368 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986401 291869 0.963152 0.988132 0.769722 25739 1 76 0.00482582 206 0 9.65683e+07 0.0365686 149066 9.77281e+07 6.56048e+06 25785 4.80071e+07 0 0.193431 0.988132 0.760587 9.65683e+07 0.00497112 2.00329e+07 1.19503e+07 2.02232e+07 221 2.02695e+07 1.6457e+07 0.00489835 2.0144e+07 49.8446 0.00152531 0.989864 0 50.2363 GTEX-13FHP-0004-SM-5DU3X C1 Blood Whole Blood 0013756 724 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FHP-0004-SM-5HJPM C1 Blood Whole Blood 0013756 724 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FHP-0004-SM-6WSAX C1 Blood Whole Blood 0013756 724 BP-43980 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FHP-0011-R10a-SM-AHZMM C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 782 ChIP-Seq GTEX-13FHP-0011-R11b-SM-5LZXP C1, A1 7 Brain Brain - Cerebellar Hemisphere 0002037 782 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989819 343610 0.945385 0.990582 0.731689 23103 1 76 0.00358005 155 0 7.25276e+07 0.0542344 1.49099e+06 7.32172e+07 3.87051e+06 23134 3.60723e+07 0 0.213696 0.990582 0.724798 7.25276e+07 0.00384399 1.56699e+07 1.20529e+07 1.57309e+07 171 1.57482e+07 8.06774e+06 0.00371192 1.57056e+07 49.9324 0.020364 0.991344 0 50.0971 GTEX-13FHP-0011-R1b-SM-5K7XL C1, A1 6.3 Brain Brain - Hippocampus 0001954 782 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990678 292401 0.970072 0.993244 0.848312 20545 1 76 0.00283821 198 0 6.38737e+07 0.0298252 8.7192e+06 6.43082e+07 1.15e+07 20555 3.18012e+07 0 0.12176 0.993244 0.842581 6.38737e+07 0.00419134 1.42271e+07 2.48068e+07 1.39236e+07 236 1.37345e+07 3.47422e+06 0.00351303 1.45717e+07 51.4788 0.135585 0.99581 0 49.461 GTEX-13FHP-0011-R5b-SM-5LZY2 C1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 782 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991372 333808 0.965368 0.992135 0.83557 21388 1 76 0.00343006 197 0 6.64834e+07 0.0344991 6.66024e+06 6.70104e+07 3.80705e+06 21399 3.30665e+07 0 0.129798 0.992135 0.828999 6.64834e+07 0.00391857 1.43868e+07 2.32338e+07 1.48121e+07 222 1.45932e+07 4.17292e+06 0.00367413 1.46471e+07 50.0922 0.0993912 0.992899 0 50.7281 GTEX-13FHP-0011-R6b-SM-5LZY6 C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 782 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991258 374730 0.964824 0.992345 0.841786 21623 1 76 0.00336435 196 0 6.66546e+07 0.0350643 7.22415e+06 6.71688e+07 3.75648e+06 21633 3.31664e+07 0 0.123037 0.992345 0.835343 6.66546e+07 0.00376139 1.43163e+07 2.13477e+07 1.49498e+07 229 1.47438e+07 4.21483e+06 0.00356265 1.45755e+07 49.7131 0.107552 0.993433 0 51.0823 GTEX-13FHP-0011-R7b-SM-5LZYI C1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 782 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991995 353752 0.967617 0.992792 0.8415 20568 1 76 0.00337707 195 0 6.55407e+07 0.0322593 7.08902e+06 6.60165e+07 3.51623e+06 20576 3.26348e+07 0 0.126117 0.992792 0.835435 6.55407e+07 0.00372387 1.40885e+07 2.72919e+07 1.46386e+07 233 1.436e+07 3.7949e+06 0.00355033 1.4403e+07 50.0748 0.107383 0.99359 0 50.9574 GTEX-13FHP-0126-SM-5IJBG 1 C1 6 pieces; well trimmed; 5% intradermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 827 1106 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989082 261596 0.973456 0.992114 0.809537 23748 1 76 0.00239999 203 0 8.29036e+07 0.0262112 426816 8.35626e+07 1.10138e+07 23776 4.12105e+07 0 0.163919 0.992114 0.803154 8.29036e+07 0.00423756 1.78954e+07 1.13669e+07 1.79121e+07 188 1.79403e+07 1.53527e+07 0.00331597 1.81111e+07 50.2368 0.00510774 0.995147 0 50.0233 GTEX-13FHP-0226-SM-5K7WD 1 C1 2 pieces; 5 and 20% fibrous stroma 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 830 1104 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98322 236337 0.971683 0.985365 0.83483 24706 1 76 0.00507511 265 0 9.94702e+07 0.0280326 685988 1.00948e+08 7.47722e+06 24737 4.93662e+07 0 0.136853 0.985365 0.822612 9.94702e+07 0.00571062 2.16731e+07 9.21821e+06 2.18832e+07 256 2.18685e+07 1.56152e+07 0.00539217 2.19013e+07 50.0375 0.00679549 0.98751 0 50.2413 GTEX-13FHP-0326-SM-5K7U2 1 C1 2 pieces; well trimmed; 5 & 10% internal fat 7.3 Nerve Nerve - Tibial 0001323 838 1096 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.975049 308260 0.96566 0.977554 0.741518 25800 1 76 0.00473156 172 0 9.86104e+07 0.034024 241353 1.00875e+08 7.44989e+06 25846 4.88845e+07 0 0.224142 0.977554 0.724873 9.86104e+07 0.00541896 2.1534e+07 1.04565e+07 2.16388e+07 200 2.16867e+07 1.54486e+07 0.00507438 2.17287e+07 50.0484 0.0023926 0.980058 0 50.1214 GTEX-13FHP-0426-SM-5J1O5 1 C1 2 pieces; well trimmed; no lesions 5.9 Blood Vessel Artery - Tibial 0007610 840 1095 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986848 202761 0.973277 0.988997 0.810205 21696 1 76 0.00416915 143 0 7.43834e+07 0.0263859 294811 7.52109e+07 4.10846e+06 21718 3.69633e+07 0 0.163072 0.988997 0.801291 7.43834e+07 0.00509345 1.5887e+07 5.45175e+06 1.60314e+07 154 1.60175e+07 1.36952e+07 0.0046303 1.60543e+07 50.0574 0.00391979 0.991147 0 50.2262 GTEX-13FHP-0526-SM-5K7UY 1 C1 2 pieces; 10% internal fat 6.9 Muscle Muscle - Skeletal 0011907 841 1094 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.988639 253166 0.98339 0.990898 0.873276 20897 1 76 0.00419248 199 0 1.00891e+08 0.0162664 1.20658e+06 1.01817e+08 7.03906e+06 20904 5.01915e+07 0 0.110114 0.990898 0.865327 1.00891e+08 0.00463923 2.17877e+07 1.0271e+07 2.19189e+07 246 2.19819e+07 2.19194e+07 0.00441535 2.19356e+07 49.9474 0.0118505 0.993156 0 50.15 GTEX-13FHP-0726-SM-5K7YI 1 C1 2; moderately congested 6.7 Lung Lung 0008952 874 1063 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.985889 128269 0.97188 0.988564 0.771445 22633 1 76 0.00295276 127 0 6.31129e+07 0.0277248 194725 6.3843e+07 1.13114e+07 22663 3.13792e+07 0 0.200435 0.988564 0.762622 6.31129e+07 0.0042683 1.39048e+07 6.09089e+06 1.39777e+07 142 1.39948e+07 1.01669e+07 0.00360875 1.40523e+07 50.1025 0.00305006 0.991238 0 50.1309 GTEX-13FHP-0726-SM-CYKPV 1 C1 2; moderately congested 6.7 Lung Lung 0008952 874 1063 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13FHP-0826-SM-5K7V5 1 C1 2 pieces; 1 is all muscle; 1 50% fibrofatty 7.3 Heart Heart - Atrial Appendage 0006631 876 1061 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987717 183014 0.979111 0.98995 0.840715 22823 1 76 0.00444077 156 0 8.44307e+07 0.0206036 2.13088e+06 8.52878e+07 5.81949e+06 22846 4.19876e+07 0 0.138395 0.98995 0.832266 8.44307e+07 0.0049069 1.8352e+07 1.05035e+07 1.85472e+07 202 1.85832e+07 1.40112e+07 0.00467331 1.84932e+07 49.8787 0.0249846 0.992182 0 50.2645 GTEX-13FHP-0926-SM-5L3EC 1 C1 2 pieces 7 Thyroid Thyroid 0002046 877 1061 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.96388 241015 0.960812 0.968043 0.720555 24383 1 76 0.00343772 127 0 6.82714e+07 0.038898 186894 7.05252e+07 7.28512e+06 24423 3.38854e+07 0 0.240257 0.968043 0.697528 6.82714e+07 0.00457173 1.48319e+07 7.70802e+06 1.48429e+07 140 1.49309e+07 1.01193e+07 0.00400229 1.50121e+07 50.1356 0.00265003 0.972207 0 50.0184 GTEX-13FHP-1026-SM-5K7Y2 1 C1 2 pieces 6.1 Heart Heart - Left Ventricle 0006566 879 1059 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.987508 93444 0.98928 0.989808 0.8383 17961 1 76 0.00286305 192 0 6.55346e+07 0.0106625 3.75268e+06 6.62094e+07 1.20329e+07 17967 3.26449e+07 0 0.150979 0.989808 0.829756 6.55346e+07 0.00412249 1.45453e+07 3.61362e+07 1.4157e+07 252 1.40313e+07 2.42436e+06 0.0034913 1.47982e+07 51.33 0.056679 0.992107 0 49.3235 GTEX-13FHP-1026-SM-CYKPW 1 C1 2 pieces 6.1 Heart Heart - Left Ventricle 0006566 879 1059 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 RIP-Seq GTEX-13FHP-1126-SM-5IJDO 1 C1 2 pieces; prominent fibrofatty plaque; 30% external fat & fibrous stroma on 1 piece 6 Blood Vessel Artery - Coronary 0001621 883 1056 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.986124 261317 0.964866 0.989194 0.72747 24595 1 76 0.0026514 157 0 8.09955e+07 0.0347346 462062 8.18803e+07 1.1119e+07 24627 4.01975e+07 0 0.237396 0.989194 0.719609 8.09955e+07 0.00450588 1.75438e+07 1.03228e+07 1.76831e+07 185 1.76306e+07 1.01487e+07 0.00357576 1.78391e+07 50.294 0.00564314 0.992263 0 50.1977 GTEX-13FHP-1526-SM-5IJGE 1 C1 4 pieces; moderate venous vascular congestiopn 6 Esophagus Esophagus - Mucosa 0006920 890 1051 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985754 213348 0.975216 0.98801 0.832668 21431 1 76 0.00487589 197 0 8.63459e+07 0.0243245 1.34629e+06 8.73937e+07 5.91131e+06 21442 4.29006e+07 0 0.142548 0.98801 0.822685 8.63459e+07 0.00544923 1.93912e+07 1.14387e+07 1.96593e+07 235 1.96187e+07 1.07162e+07 0.00516191 1.96252e+07 50.0082 0.0154049 0.990267 0 50.3433 GTEX-13FHP-1626-SM-5N9FK 1 C1 6 pieces; well trimmed 5.7 Esophagus Esophagus - Muscularis 0004648 891 1051 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986323 323512 0.968974 0.987847 0.819434 23825 1 76 0.00426519 268 0 9.79606e+07 0.0308582 3.08112e+06 9.91658e+07 5.12341e+06 23848 4.86186e+07 0 0.149539 0.987847 0.809476 9.79606e+07 0.00442345 2.15136e+07 1.13627e+07 2.16483e+07 325 2.15882e+07 9.91814e+06 0.0043442 2.1714e+07 50.1453 0.0310704 0.989371 0 50.1561 GTEX-13FHP-2426-SM-5KLZ5 2 C1 6 pieces; mucosa mostly autolyzed 6.2 Colon Colon - Transverse 0001157 918 1029 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.981399 185909 0.968503 0.98414 0.800187 24305 1 76 0.0041408 153 0 7.52369e+07 0.0310527 732258 7.64494e+07 3.87944e+06 24325 3.7351e+07 0 0.168316 0.98414 0.787496 7.52369e+07 0.00542489 1.62088e+07 7.62748e+06 1.63108e+07 168 1.63156e+07 1.17129e+07 0.00478106 1.64024e+07 50.1326 0.00957834 0.986881 0 50.1568 GTEX-13FHP-2826-SM-5IJFW 2 C1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 928 1021 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984477 377718 0.917417 0.986596 0.725171 33682 1 76 0.00486812 183 0 9.54517e+07 0.0822238 1.14033e+06 9.67485e+07 6.33713e+06 33740 4.74398e+07 0 0.192246 0.986596 0.715451 9.54517e+07 0.005245 1.92621e+07 1.9277e+07 1.94455e+07 178 1.95094e+07 1.51988e+07 0.00505615 1.93765e+07 49.8292 0.0117866 0.988715 0 50.237 GTEX-13FHP-2926-SM-5IJG9 1 C1 4 pieces 6.6 Brain Brain - Cerebellum 0002037 931 1018 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985444 405605 0.947784 0.98742 0.726047 24379 1 76 0.00515845 158 0 8.68969e+07 0.0519351 1.50609e+06 8.8004e+07 5.7105e+06 24414 4.31512e+07 0 0.221738 0.98742 0.716913 8.68969e+07 0.00553992 1.87241e+07 1.60935e+07 1.89226e+07 193 1.89489e+07 9.34028e+06 0.0053488 1.88588e+07 49.8808 0.0171139 0.989396 0 50.2637 GTEX-13FHP-3026-SM-5IJBS 1 C1 4 pieces; adherent meninges on 1 piece [annotated] 6.1 Brain Brain - Cortex 0001870 934 1016 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989737 348833 0.964103 0.992632 0.816772 24738 1 76 0.00240517 272 0 9.75658e+07 0.0355406 3.95784e+06 9.82899e+07 1.32995e+07 24765 4.85186e+07 0 0.147331 0.992632 0.810754 9.75658e+07 0.00393927 2.157e+07 1.69853e+07 2.13889e+07 326 2.1311e+07 1.15395e+07 0.00316999 2.19061e+07 50.6885 0.040267 0.995528 0 49.7893 GTEX-13FHP-3126-SM-5KLYX 2 C1 1 piece; mostly anterior 6.8 Pituitary Pituitary 0000007 934 1016 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987799 234780 0.96107 0.990165 0.749252 26868 1 76 0.00406655 204 0 9.45249e+07 0.0386573 715183 9.54637e+07 4.57924e+06 26917 4.69944e+07 0 0.211818 0.990165 0.741884 9.45249e+07 0.00505009 2.04693e+07 1.01541e+07 2.06806e+07 244 2.07194e+07 1.32455e+07 0.00455715 2.06417e+07 49.9061 0.00749167 0.992531 0 50.2567 GTEX-13FLV-0004-SM-5DU4T B1 Blood Whole Blood 0013756 1003 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FLV-0004-SM-5HJRE B1 Blood Whole Blood 0013756 1003 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FLV-0004-SM-6WSBZ B1 Blood Whole Blood 0013756 1003 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FLV-0011-R10b-SM-5LZZ2 B1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1011 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99043 317580 0.960223 0.991376 0.830753 22647 1 76 0.00316031 135 0 5.74758e+07 0.0394598 2.57609e+06 5.79758e+07 3.2068e+06 22663 2.8581e+07 0 0.12947 0.991376 0.823588 5.74758e+07 0.00363058 1.26246e+07 9.67621e+06 1.27161e+07 165 1.26902e+07 6.39549e+06 0.00339522 1.27028e+07 50.0248 0.0444339 0.992322 0 50.1806 GTEX-13FLV-0011-R10b-SM-AHZ6K B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1011 ChIP-Seq GTEX-13FLV-0011-R10b-SM-CYKS9 B1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 1011 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 RIP-Seq GTEX-13FLV-0011-R11a-SM-5LZZ7 B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 1011 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99019 314745 0.945428 0.991063 0.770157 22366 1 76 0.00337916 157 0 6.62598e+07 0.0543255 1.23186e+06 6.68573e+07 3.61898e+06 22384 3.29593e+07 0 0.175271 0.991063 0.763275 6.62598e+07 0.00377101 1.42378e+07 1.244e+07 1.44468e+07 168 1.44184e+07 7.70732e+06 0.00357491 1.43201e+07 49.8289 0.0184253 0.991937 0 50.3644 GTEX-13FLV-0011-R3b-SM-5LZYP B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1011 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989925 320015 0.964893 0.991061 0.84614 22703 1 76 0.00305845 197 0 7.14612e+07 0.0348332 5.47285e+06 7.21057e+07 3.97813e+06 22715 3.55453e+07 0 0.118753 0.991061 0.838577 7.14612e+07 0.00350654 1.55603e+07 1.40513e+07 1.60534e+07 242 1.59006e+07 6.94846e+06 0.00328224 1.57755e+07 49.8024 0.0759004 0.992197 0 50.7799 GTEX-13FLV-0011-R4a-SM-5LZYU B1, A1 5.9 Brain Brain - Amygdala 0001876 1011 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990481 345468 0.9605 0.99138 0.846618 21781 1 76 0.00313294 157 0 6.11642e+07 0.0392649 5.45747e+06 6.16959e+07 3.41578e+06 21794 3.04153e+07 0 0.113882 0.99138 0.83932 6.11642e+07 0.00359978 1.34343e+07 1.42489e+07 1.35852e+07 189 1.34655e+07 6.32256e+06 0.00336614 1.36055e+07 50.2586 0.0884575 0.99228 0 50.2792 GTEX-13FLV-0011-R5a-SM-5LZWT B1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 1011 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992217 485506 0.956667 0.992939 0.828901 22909 1 76 0.00307958 198 0 7.28348e+07 0.0430772 4.9182e+06 7.33528e+07 3.96192e+06 22926 3.62474e+07 0 0.127766 0.992939 0.823048 7.28348e+07 0.00343415 1.58213e+07 2.13241e+07 1.60997e+07 243 1.60171e+07 7.5289e+06 0.00325673 1.59569e+07 49.906 0.0670486 0.99366 0 50.4362 GTEX-13FLV-0011-R6a-SM-5KLZ4 B1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1011 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.989346 322700 0.959341 0.991332 0.829512 23988 1 76 0.00374755 270 0 8.3798e+07 0.0403972 5.45411e+06 8.45307e+07 3.571e+06 24008 4.16882e+07 0 0.129829 0.991332 0.822322 8.3798e+07 0.00472291 1.81548e+07 1.70078e+07 1.8465e+07 269 1.83934e+07 9.44792e+06 0.00423425 1.83788e+07 49.9802 0.0645222 0.993318 0 50.4236 GTEX-13FLV-0011-R7b-SM-5K7WW B1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 1011 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991583 429602 0.955339 0.993793 0.824893 23238 1 76 0.00260022 198 0 7.26999e+07 0.04442 4.14603e+06 7.31539e+07 1.1841e+07 23250 3.62019e+07 0 0.130446 0.993793 0.819773 7.26999e+07 0.0037569 1.58895e+07 2.06866e+07 1.59015e+07 249 1.58092e+07 7.61821e+06 0.00317728 1.61415e+07 50.5199 0.0566754 0.996003 0 50.0188 GTEX-13FLV-0011-R8a-SM-5LZZE B1, A1 7.3 Brain Brain - Hypothalamus 0001898 1011 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99175 330871 0.962179 0.992657 0.833291 23283 1 76 0.00309013 164 0 6.44807e+07 0.0375252 3.4539e+06 6.49577e+07 3.63314e+06 23299 3.20844e+07 0 0.128889 0.992657 0.827171 6.44807e+07 0.00345099 1.41691e+07 1.18461e+07 1.43488e+07 189 1.42678e+07 7.50723e+06 0.0032704 1.43033e+07 50.0621 0.0531716 0.993563 0 50.3151 GTEX-13FLV-0011-R9b-SM-5L3DA B1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 1011 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989159 395297 0.958319 0.992942 0.82478 22966 1 76 0.00295949 209 0 6.90333e+07 0.0415175 4.54083e+06 6.9524e+07 6.42818e+06 22980 3.43151e+07 0 0.13354 0.992942 0.818959 6.90333e+07 0.00388683 1.51732e+07 1.67081e+07 1.52368e+07 221 1.50559e+07 6.29031e+06 0.00342139 1.55912e+07 50.8734 0.0653132 0.996725 0 50.1046 GTEX-13FLV-0126-SM-5K7WT 1 B1 6 pieces; well trimmed, minimal internal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1026 737 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991017 140681 0.971461 0.993262 0.754693 23352 1 76 0.00271247 167 0 7.06453e+07 0.0283187 395269 7.11245e+07 1.31551e+07 23380 3.51636e+07 0 0.216769 0.993262 0.749608 7.06453e+07 0.00389112 1.54627e+07 8.52978e+06 1.54919e+07 156 1.55097e+07 1.11625e+07 0.00330046 1.55969e+07 50.1401 0.00555743 0.995508 0 50.0472 GTEX-13FLV-0226-SM-5J2OF 1 B1 2 pieces; 5-10% of one piece is fat/vessels 6.4 Thyroid Thyroid 0002046 1033 730 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981924 787601 0.94736 0.986218 0.66064 24741 1 76 0.00450517 135 0 9.15372e+07 0.0523601 680251 9.28163e+07 5.34037e+06 24793 4.54018e+07 0 0.28672 0.986218 0.651536 9.15372e+07 0.00624619 1.96397e+07 3.01116e+07 1.97862e+07 163 1.99113e+07 1.10875e+07 0.00537189 1.98836e+07 49.9652 0.007329 0.990513 0 50.1858 GTEX-13FLV-0326-SM-5N9DJ 1 B1 2 pieces; includes portion of capsule (target is 1 cm below capsule), mild steatosis, passive congestion, focal portal chronic inflammation 5.7 Liver Liver 0001114 1045 718 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99272 350749 0.975763 0.993538 0.823492 23832 1 76 0.00271514 377 0 1.44728e+08 0.0240272 1.76464e+06 1.4567e+08 6.91608e+06 23865 7.2119e+07 0 0.152271 0.993538 0.81817 1.44728e+08 0.00307844 3.08599e+07 2.67982e+07 3.09865e+07 336 3.08612e+07 2.55063e+07 0.00289664 3.10975e+07 50.1907 0.012114 0.994356 0 50.1023 GTEX-13FLV-0426-SM-5KLZA 1 B1 2 pieces; hemosiderin-laden macrophages, anthracotic pigment, edema 6.7 Lung Lung 0008952 1055 708 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984614 186204 0.975453 0.987452 0.758074 24286 1 76 0.00415203 204 0 9.90095e+07 0.0241194 352618 1.00268e+08 4.94642e+06 24325 4.91761e+07 0 0.217379 0.987452 0.748561 9.90095e+07 0.00530026 2.18018e+07 8.4999e+06 2.20141e+07 242 2.20804e+07 1.49793e+07 0.00472449 2.20024e+07 49.9116 0.00351677 0.99029 0 50.2423 GTEX-13FLV-0626-SM-5IFEY 1 B1 2 pieces; interlobular and acinar fibrosis, islets visualized, some atrophy, sloughing of ductal epithelium with ?PanIN, 5-15% is fat/fibrous 6.2 Pancreas Pancreas 0001150 1063 700 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987705 188616 0.983983 0.990623 0.866436 20004 1 76 0.00233026 87 0 7.44461e+07 0.0156727 211064 7.51508e+07 9.04148e+06 20015 3.70366e+07 0 0.117547 0.990623 0.858311 7.44461e+07 0.00371312 1.72912e+07 4.18032e+07 1.75282e+07 100 1.74762e+07 2.56638e+07 0.00301965 1.75602e+07 50.1199 0.00280854 0.99354 0 50.3403 GTEX-13FLV-0926-SM-5L3DZ 1 B1 2 pieces; 10-15% internal fat, interstitial fibrosis 6.6 Heart Heart - Left Ventricle 0006566 1085 678 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989268 179917 0.982913 0.992786 0.830629 21387 1 76 0.00294925 198 0 7.64853e+07 0.016852 2.11881e+06 7.70411e+07 8.01888e+06 21402 3.80415e+07 0 0.152284 0.992786 0.824637 7.64853e+07 0.00365722 1.70563e+07 1.32573e+07 1.69298e+07 212 1.70378e+07 1.24669e+07 0.00330198 1.71777e+07 50.2043 0.0275024 0.996304 0 49.8139 GTEX-13FLV-0926-SM-CYKRL 1 B1 2 pieces; 10-15% internal fat, interstitial fibrosis 6.6 Heart Heart - Left Ventricle 0006566 1085 678 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 RIP-Seq GTEX-13FLV-1126-SM-5J2NO 0 B1 4 pieces 7.2 Esophagus Esophagus - Mucosa 0006920 1089 674 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983863 211973 0.977399 0.987776 0.764029 23019 1 76 0.00441877 166 0 8.81728e+07 0.0222859 296305 8.92639e+07 4.83816e+06 23046 4.37646e+07 0 0.21337 0.987776 0.754689 8.81728e+07 0.00615842 1.97532e+07 9.40898e+06 1.98766e+07 172 1.99883e+07 1.47632e+07 0.00528515 1.99782e+07 49.9874 0.00331943 0.991689 0 50.1557 GTEX-13FLV-1226-SM-5IJBZ 2 B1 6 pieces; well trimmed 6.7 Esophagus Esophagus - Muscularis 0004648 1091 672 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987969 183326 0.972546 0.990918 0.78123 22216 1 76 0.00231722 137 0 6.40443e+07 0.0272163 728281 6.46313e+07 8.79495e+06 22240 3.183e+07 0 0.191316 0.990918 0.774135 6.40443e+07 0.00410717 1.38926e+07 6.20501e+06 1.38951e+07 152 1.38743e+07 9.42271e+06 0.00320953 1.40924e+07 50.3899 0.0112682 0.993867 0 50.0046 GTEX-13FLV-1326-SM-5L3EJ 1 B1 5 pieces; well trimmed 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 1095 668 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.979411 229729 0.974857 0.983416 0.800227 22039 1 76 0.00314607 160 0 7.48005e+07 0.0248765 797380 7.6062e+07 8.35384e+06 22062 3.71536e+07 0 0.17463 0.983416 0.786956 7.48005e+07 0.00404704 1.61411e+07 6.44045e+06 1.62173e+07 171 1.62749e+07 1.21948e+07 0.00359472 1.63595e+07 50.1295 0.0104833 0.98742 0 50.1178 GTEX-13FLV-1426-SM-5J1N4 1 B1 6 pieces; atherosclerosis 7.3 Blood Vessel Artery - Aorta 0001496 1097 666 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987702 192805 0.97628 0.98981 0.809023 22009 1 76 0.00409856 164 0 8.02284e+07 0.0233042 185094 8.10544e+07 4.54521e+06 22026 3.98699e+07 0 0.167258 0.98981 0.800779 8.02284e+07 0.00497457 1.72831e+07 6.30555e+06 1.74413e+07 170 1.74494e+07 1.48922e+07 0.00453563 1.74403e+07 49.9869 0.00228358 0.991917 0 50.2279 GTEX-13FLV-2326-SM-5K7UK 0 B1 2 pieces; well trimmed 6.6 Nerve Nerve - Tibial 0001323 1299 464 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985413 225405 0.97074 0.987914 0.773346 24323 1 76 0.00443877 193 0 8.79536e+07 0.028898 229367 8.90297e+07 5.90505e+06 24364 4.36962e+07 0 0.197394 0.987914 0.763999 8.79536e+07 0.00509175 1.93778e+07 7.66352e+06 1.95159e+07 185 1.95821e+07 1.49022e+07 0.00476444 1.95272e+07 49.9298 0.0025763 0.990414 0 50.1775 GTEX-13FLW-0003-SM-5CV8N B1 Blood Whole Blood 0013756 1303 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FLW-0003-SM-5HJRA B1 Blood Whole Blood 0013756 1303 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FLW-0003-SM-6WSC2 B1 Blood Whole Blood 0013756 1303 BP-44030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/27/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FLW-0011-R10b-SM-5LZZF B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 1307 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992762 482096 0.958021 0.993465 0.832357 23098 1 76 0.0032774 160 0 6.91446e+07 0.0415422 2.26624e+06 6.95994e+07 3.69225e+06 23116 3.44184e+07 0 0.125664 0.993465 0.826918 6.91446e+07 0.00353828 1.51249e+07 1.28882e+07 1.52263e+07 199 1.51931e+07 8.82968e+06 0.00340775 1.52052e+07 50.02 0.0325612 0.994169 0 50.167 GTEX-13FLW-0011-R10b-SM-AHZ6I B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1307 ChIP-Seq GTEX-13FLW-0011-R1b-SM-5LZX2 B1, A1 6.3 Brain Brain - Hippocampus 0001954 1307 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991697 1.43573e+06 0.9318 0.99266 0.812052 23071 1 76 0.00338809 268 0 8.12615e+07 0.0678267 5.7157e+06 8.18624e+07 4.43899e+06 23085 4.04464e+07 0 0.119748 0.99266 0.806091 8.12615e+07 0.00376736 1.71724e+07 4.94254e+07 1.74677e+07 272 1.74478e+07 8.01347e+06 0.00357754 1.72943e+07 49.7791 0.0698207 0.993622 0 50.4262 GTEX-13FLW-0011-R5a-SM-5LZX6 B1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 1307 BP-46372 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991166 513531 0.950254 0.991951 0.820774 22554 1 76 0.00353198 157 0 6.52628e+07 0.0494963 4.15648e+06 6.57924e+07 3.71887e+06 22569 3.24532e+07 0 0.12948 0.991951 0.814168 6.52628e+07 0.00400094 1.40295e+07 2.32763e+07 1.43009e+07 187 1.4262e+07 6.39658e+06 0.00376627 1.41281e+07 49.7642 0.0631756 0.992736 0 50.4791 GTEX-13FLW-0011-R6b-SM-5L3EN B1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1307 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98816 652803 0.952982 0.991905 0.811884 23958 1 76 0.00335818 201 0 7.81736e+07 0.0466145 4.07944e+06 7.88116e+07 8.53763e+06 23976 3.88448e+07 0 0.141098 0.991905 0.805311 7.81736e+07 0.00410369 1.69225e+07 2.22776e+07 1.68929e+07 239 1.69672e+07 9.65409e+06 0.00372952 1.71171e+07 50.2198 0.051762 0.99565 0 49.9561 GTEX-13FLW-0011-R7b-SM-5L3EZ B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 1307 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988907 498090 0.957746 0.992593 0.821804 23202 1 76 0.00337813 201 0 7.38168e+07 0.0419563 4.97984e+06 7.43676e+07 7.6736e+06 23212 3.6697e+07 0 0.135942 0.992593 0.815717 7.38168e+07 0.00413048 1.60905e+07 2.37632e+07 1.59903e+07 236 1.60018e+07 7.82832e+06 0.00375291 1.63226e+07 50.4963 0.0669624 0.996279 0 49.8438 GTEX-13FLW-0011-R8b-SM-5J1MZ B1, A1 6.4 Brain Brain - Hypothalamus 0001898 1307 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988749 653581 0.956211 0.990576 0.827312 24393 1 76 0.00427298 381 0 1.07263e+08 0.0435603 7.53838e+06 1.08284e+08 5.87589e+06 24412 5.33367e+07 0 0.128899 0.990576 0.819516 1.07263e+08 0.00498797 2.32378e+07 2.89322e+07 2.36959e+07 358 2.34674e+07 1.05907e+07 0.00462981 2.36501e+07 50.1938 0.0696169 0.992403 0 50.4881 GTEX-13FLW-0326-SM-5J2M4 2 B1 2 pieces; some nodularity 6 Thyroid Thyroid 0002046 1403 1069 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981095 331672 0.965265 0.985373 0.765038 25174 1 76 0.00459576 176 0 9.65084e+07 0.0343736 203084 9.79411e+07 5.61104e+06 25218 4.78491e+07 0 0.200227 0.985373 0.753848 9.65084e+07 0.00650745 2.10591e+07 1.58842e+07 2.12288e+07 183 2.13556e+07 1.6919e+07 0.00554746 2.13295e+07 49.9695 0.00207353 0.989651 0 50.2007 GTEX-13FLW-1426-SM-5K7YE 1 B1 2 pieces; oversized 6.8 Brain Brain - Cortex 0001870 1431 1041 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.9903 203611 0.962498 0.992777 0.837022 22702 1 76 0.0028646 131 0 6.06742e+07 0.0371523 2.10638e+06 6.11156e+07 1.0915e+07 22712 3.02014e+07 0 0.125476 0.992777 0.830976 6.06742e+07 0.00403115 1.33895e+07 1.12339e+07 1.33041e+07 162 1.32939e+07 7.51849e+06 0.00344642 1.35391e+07 50.4569 0.0344655 0.995254 0 49.84 GTEX-13FLW-1426-SM-CYKSG 1 B1 2 pieces; oversized 6.8 Brain Brain - Cortex 0001870 1431 1041 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 RIP-Seq GTEX-13FLW-2126-SM-5N9FD 1 B1 2 pieces; oversized, spermatogenesis is present 5.7 Testis Testis 0000473 1440 1032 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988756 353448 0.927493 0.990072 0.739185 33146 1 76 0.00412021 174 0 8.70223e+07 0.0721787 1.4212e+06 8.78949e+07 3.8879e+06 33207 4.32893e+07 0 0.188308 0.990072 0.731846 8.70223e+07 0.00412366 1.8067e+07 1.41779e+07 1.81653e+07 182 1.81865e+07 1.33954e+07 0.00412193 1.81529e+07 49.9539 0.0161693 0.991388 0 50.1357 GTEX-13FTW-0003-SM-5CV8M B1 Blood Whole Blood 0013756 -79 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FTW-0003-SM-5HJRT B1 Blood Whole Blood 0013756 -79 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FTW-0003-SM-6WSBY B1 Blood Whole Blood 0013756 -79 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FTW-0005-SM-5LZVZ B1 9.2 Blood Whole Blood 0013756 -79 BP-44115 RNA isolation_PAXgene Blood RNA (Manual) 09/30/2013 LCSET-4900 03/23/2014 TruSeq.v1 RNASEQ 0.989295 641927 0.956156 0.990833 0.807313 19339 1 76 0.00273175 116 0 6.55583e+07 0.0434161 209424 6.61648e+07 3.31995e+06 19352 3.26261e+07 0 0.148842 0.990833 0.799913 6.55583e+07 0.00362537 1.42635e+07 3.27416e+07 1.44334e+07 132 1.4463e+07 1.35935e+07 0.00317787 1.43521e+07 49.8076 0.00316519 0.992371 0 50.2962 GTEX-13FTW-0126-SM-5IJED 1 B1 2 pieces; oversized, ~15% of one piece is fat 9.3 Adrenal Gland Adrenal Gland 0002369 136 705 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.989521 200564 0.980446 0.991132 0.848153 22602 1 76 0.00466876 161 0 8.25757e+07 0.0191635 1.1329e+06 8.33145e+07 5.04874e+06 22617 4.10834e+07 0 0.132293 0.991132 0.840631 8.25757e+07 0.00486036 1.82944e+07 1.06484e+07 1.84559e+07 201 1.84597e+07 1.42729e+07 0.0047644 1.84238e+07 49.9514 0.0135979 0.992742 0 50.2197 GTEX-13FTW-0326-SM-5K7UW 0 B1 6 pieces; well trimmed 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 138 703 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986158 210631 0.972591 0.988585 0.797438 23765 1 76 0.00442993 191 0 8.35793e+07 0.0271897 490736 8.45444e+07 5.52874e+06 23794 4.15439e+07 0 0.175153 0.988585 0.788335 8.35793e+07 0.00516494 1.82616e+07 8.96374e+06 1.8423e+07 182 1.84452e+07 1.37572e+07 0.00479653 1.84384e+07 49.9909 0.00580448 0.991012 0 50.2199 GTEX-13FTW-0426-SM-5K7X2 0 B1 2 pieces; 1 is oversized and has central defects (? poor fixation) 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 139 702 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99154 129110 0.979665 0.993836 0.852046 21219 1 76 0.0027522 138 0 6.25932e+07 0.0200539 356586 6.29814e+07 1.0738e+07 21232 3.11705e+07 0 0.127619 0.993836 0.846794 6.25932e+07 0.00390709 1.38911e+07 6.44877e+06 1.3846e+07 153 1.38505e+07 1.06967e+07 0.00332831 1.40227e+07 50.3089 0.00566177 0.996133 0 49.9188 GTEX-13FTW-0526-SM-5IFIP 1 B1 2 pieces; islets well visualized, some fibrosis 7.3 Pancreas Pancreas 0001150 142 699 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991022 246598 0.979234 0.992795 0.85556 21676 1 76 0.0032704 123 0 8.92272e+07 0.0205409 218785 8.98748e+07 6.66642e+06 21690 4.44305e+07 0 0.123674 0.992795 0.849395 8.92272e+07 0.00402598 2.04706e+07 2.36686e+07 2.07888e+07 140 2.07314e+07 2.54453e+07 0.00364752 2.06912e+07 49.9514 0.00243433 0.994568 0 50.3856 GTEX-13FTW-0626-SM-5IFEX 0 B1 2 pieces; some fibrosis and nodularity; one piece is ~20% fat, fibrocollagenous tissue and large vessels; small adenomatoid nodule 7.6 Thyroid Thyroid 0002046 145 696 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4813,LCSET-5125 03/08/2014 TruSeq.v1 RNASEQ 0.993189 354300 0.967689 0.994677 0.793368 23547 1 76 0.00203358 208 0 8.45772e+07 0.0320228 258356 8.50298e+07 3.06035e+06 23577 4.21408e+07 0 0.174321 0.994677 0.789145 8.45772e+07 0.0029047 1.85572e+07 1.19555e+07 1.86882e+07 210 1.86804e+07 1.51965e+07 0.00246849 1.86856e+07 50.0069 0.00303842 0.996164 0 50.1759 GTEX-13FTW-0726-SM-9WG72 1 B1 6 pieces 8.7 Blood Vessel Artery - Aorta 0001496 148 693 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992942 182805 0.978765 0.994957 0.852765 21847 1 76 0.00233836 280 0 9.4134e+07 0.0207665 254809 9.46111e+07 6.76802e+06 21870 4.68752e+07 0 0.126 0.994957 0.848464 9.4134e+07 0.00333802 2.03946e+07 6.34987e+06 2.06017e+07 278 2.06168e+07 1.87938e+07 0.00283718 2.05611e+07 49.9324 0.00269323 0.996972 0 50.2526 GTEX-13FTW-0826-SM-5K7XR 0 B1 2 pieces; 30-40% is fat/nerve/ganglion cells 6.8 Heart Heart - Atrial Appendage 0006631 150 691 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991709 135851 0.978766 0.994006 0.85404 20434 1 76 0.00281009 197 0 7.5319e+07 0.0209534 1.09471e+06 7.57732e+07 1.47178e+07 20446 3.75166e+07 0 0.124726 0.994006 0.848921 7.5319e+07 0.00390218 1.59733e+07 1.38131e+07 1.57588e+07 213 1.56958e+07 1.18866e+07 0.00335488 1.6192e+07 50.778 0.0144472 0.996303 0 49.662 GTEX-13FTW-0926-SM-5J2NJ 0 B1 2 pieces; calcific atherosclerosis with profound luminal narrowing 6.4 Blood Vessel Artery - Coronary 0001621 155 686 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982805 180421 0.977685 0.986992 0.865676 21619 1 76 0.00427187 144 0 7.38014e+07 0.0219281 224324 7.4774e+07 4.37292e+06 21629 3.66227e+07 0 0.112008 0.986992 0.854416 7.38014e+07 0.0060373 1.58062e+07 5.35204e+06 1.59464e+07 152 1.59758e+07 1.56434e+07 0.00515084 1.60642e+07 50.1381 0.00300003 0.99118 0 50.2208 GTEX-13FTW-1026-SM-5L3E3 0 B1 2 pieces 7.1 Heart Heart - Left Ventricle 0006566 158 683 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989028 181148 0.986175 0.99272 0.873081 19067 1 76 0.00332014 152 0 6.92106e+07 0.013552 1.51618e+06 6.97182e+07 7.76713e+06 19071 3.44186e+07 0 0.113094 0.99272 0.866725 6.92106e+07 0.00410368 1.53526e+07 1.50718e+07 1.51678e+07 173 1.52514e+07 1.15081e+07 0.00371045 1.54958e+07 50.3975 0.0217473 0.996412 0 49.6972 GTEX-13FTW-1126-SM-5J2NV 1 B1 2 pieces; severe microvescicular and macrovesicular (predominant) steatosis, mild fibrosis 7.7 Liver Liver 0001114 163 678 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985179 257065 0.980961 0.989224 0.856169 21337 1 76 0.00433504 155 0 9.16683e+07 0.0179996 637141 9.26669e+07 4.99436e+06 21353 4.54924e+07 0 0.124792 0.989224 0.846943 9.16683e+07 0.00597475 1.9819e+07 1.55498e+07 1.9866e+07 202 1.99862e+07 1.87448e+07 0.00515154 2.00352e+07 50.0611 0.00687561 0.993269 0 50.0593 GTEX-13FTW-1226-SM-5LZZ1 1 B1 2 pieces; stromal and glandular hyperplasia, some atrophy, focal chronic prostatitits, transitional metaplasia 7.6 Prostate Prostate 0002367 181 660 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991414 244446 0.968403 0.992353 0.757376 24392 1 76 0.00336917 132 0 6.71162e+07 0.0312908 196652 6.76334e+07 3.76783e+06 24421 3.33997e+07 0 0.211027 0.992353 0.751584 6.71162e+07 0.00368407 1.4876e+07 6.57157e+06 1.4954e+07 145 1.49807e+07 1.00966e+07 0.00352647 1.49107e+07 49.883 0.00290762 0.993293 0 50.1308 GTEX-13FTW-1326-SM-5LZZD 1 B1 2 pieces; spermatogenesis is present 7.7 Testis Testis 0000473 186 655 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990283 313136 0.940531 0.991158 0.744722 31893 1 76 0.00334961 143 0 7.25062e+07 0.0591616 1.15436e+06 7.3153e+07 3.99335e+06 31948 3.60904e+07 0 0.195809 0.991158 0.738137 7.25062e+07 0.00361451 1.54802e+07 9.56541e+06 1.54680e+07 148 1.55116e+07 1.16565e+07 0.00348194 1.54951e+07 49.9734 0.01578 0.992033 0 49.9803 GTEX-13FTW-1426-SM-5LZWZ 0 B1 2 pieces; predominantly fat with 5-15% fibrous tissue, no ductal elements seen 7.8 Breast Breast - Mammary Tissue 0008367 189 652 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99116 303378 0.974726 0.991977 0.836913 22777 1 76 0.00327463 207 0 7.87497e+07 0.025027 468107 7.93866e+07 4.10946e+06 22799 3.9204e+07 0 0.137813 0.991977 0.830199 7.87497e+07 0.00357397 1.73375e+07 9.90261e+06 1.74667e+07 215 1.74443e+07 1.2821e+07 0.00342417 1.74193e+07 49.9642 0.00589655 0.992794 0 50.1857 GTEX-13FTW-1526-SM-5LZXC 0 B1 6 pieces; well trimmed 7.5 Esophagus Esophagus - Muscularis 0004648 194 647 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991919 221385 0.979137 0.992577 0.848925 21776 1 76 0.00312942 173 0 7.43134e+07 0.0205442 544068 7.48691e+07 3.83742e+06 21788 3.70098e+07 0 0.130212 0.992577 0.842623 7.43134e+07 0.00339837 1.61612e+07 6.33965e+06 1.62747e+07 183 1.62477e+07 1.33451e+07 0.00326381 1.62368e+07 49.9832 0.00726692 0.993235 0 50.1749 GTEX-13FTW-1626-SM-5KM4N 0 B1 6 pieces; eosinophilic squamous surface may indicate significant alcohol ingestion 8.2 Esophagus Esophagus - Mucosa 0006920 199 642 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989121 182180 0.979184 0.990712 0.846389 21784 1 76 0.00330461 136 0 6.5272e+07 0.0204298 378605 6.58839e+07 3.83977e+06 21798 3.25013e+07 0 0.132796 0.990712 0.838528 6.5272e+07 0.00401019 1.47129e+07 9.84989e+06 1.48213e+07 143 1.48188e+07 1.34037e+07 0.00365683 1.48148e+07 49.9932 0.00574655 0.992303 0 50.1835 GTEX-13FTW-1726-SM-5KM2B 1 B1 6 pieces; mucosa and submucosa, well preserved 6.7 Stomach Stomach 0000945 203 638 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984423 185204 0.981886 0.9871 0.848687 22168 1 76 0.00376476 265 0 8.57858e+07 0.0176579 625578 8.69069e+07 3.92716e+06 22188 4.26584e+07 0 0.133198 0.9871 0.837739 8.57858e+07 0.0048259 1.94984e+07 5.53872e+07 1.98522e+07 207 1.98781e+07 1.98886e+07 0.00429389 1.9693e+07 49.7661 0.00719825 0.989777 0 50.4496 GTEX-13FTW-1826-SM-5IJEN 1 B1 6 pieces; predominantly mucosa/submucosa, 2 with small portion of muscularis 8.1 Colon Colon - Transverse 0001157 213 628 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986065 169947 0.974374 0.987565 0.813251 23291 1 76 0.00532457 173 0 7.77923e+07 0.0234263 874328 7.87719e+07 5.09513e+06 23320 3.86205e+07 0 0.161123 0.987565 0.803138 7.77923e+07 0.00540791 1.72657e+07 1.33264e+07 1.73914e+07 175 1.73599e+07 1.15835e+07 0.00536617 1.74135e+07 50.0771 0.0110995 0.989065 0 50.1812 GTEX-13FTW-1926-SM-5K7Y4 0 B1 6 pieces; well trimmed 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 216 625 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99076 148163 0.977822 0.993095 0.843418 21339 1 76 0.00264857 146 0 6.4373e+07 0.0218794 396637 6.48206e+07 1.14987e+07 21354 3.20486e+07 0 0.134404 0.993095 0.837594 6.4373e+07 0.00382684 1.3995e+07 6.23749e+06 1.40181e+07 151 1.40081e+07 1.15508e+07 0.00323632 1.41484e+07 50.2492 0.006119 0.995429 0 50.0413 GTEX-13FTW-2026-SM-5IJE2 1 B1 6 pieces; mucosa/submucosa with pronounced lymphoid component in 3 of 6 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 220 621 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986217 212538 0.977876 0.98786 0.820883 24666 1 76 0.00509135 291 0 1.15122e+08 0.0211931 647701 1.16537e+08 7.6992e+06 24700 5.72359e+07 0 0.156992 0.98786 0.810918 1.15122e+08 0.0051222 2.5804e+07 1.5315e+07 2.59422e+07 277 2.59834e+07 2.15942e+07 0.00510675 2.5953e+07 49.9707 0.0055579 0.989503 0 50.1335 GTEX-13FTW-2126-SM-5K7YG 1 B1 6 pieces; muscularis and residual submucosa 6.4 Colon Colon - Sigmoid 0001159 224 617 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989176 141850 0.962355 0.991769 0.823589 21648 1 76 0.00276815 136 0 6.03147e+07 0.0374091 434616 6.08152e+07 1.1131e+07 21661 3.00193e+07 0 0.138765 0.991769 0.81681 6.03147e+07 0.00387136 1.28971e+07 6.8512e+06 1.29552e+07 141 1.29449e+07 1.00739e+07 0.00331832 1.30492e+07 50.2006 0.0071465 0.994362 0 50.1123 GTEX-13FTW-2226-SM-5J1OH 1 B1 2 pieces; intimal thickening and early atherosclerosis 6.3 Blood Vessel Artery - Tibial 0007610 365 476 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987126 241699 0.976598 0.989318 0.830591 21667 1 76 0.00404152 170 0 8.46771e+07 0.0230076 270480 8.55913e+07 4.79909e+06 21690 4.20715e+07 0 0.146007 0.989318 0.821719 8.46771e+07 0.00497053 1.81828e+07 6.48378e+06 1.83537e+07 185 1.83513e+07 1.63095e+07 0.00450499 1.83647e+07 50.0183 0.00316013 0.991511 0 50.2339 GTEX-13FTW-2326-SM-5K7YS 1 B1 2 pieces; 5-10% is internal fat/vessels/nerve 7.1 Muscle Muscle - Skeletal 0011907 366 475 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.992817 103873 0.983066 0.994803 0.876147 18715 1 76 0.00262752 139 0 6.15541e+07 0.0167022 628204 6.18757e+07 1.10096e+07 18722 3.06713e+07 0 0.106919 0.994803 0.871593 6.15541e+07 0.0036794 1.34474e+07 8.224e+06 1.33632e+07 148 1.33523e+07 1.18048e+07 0.00315241 1.35738e+07 50.4113 0.0101527 0.996788 0 49.8429 GTEX-13FTW-2426-SM-9WG73 1 B1 3 pieces; includes up to 40-50% internal and attached fat 7 Nerve Nerve - Tibial 0001323 368 473 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992915 170263 0.9697 0.994736 0.753065 23859 1 76 0.00252083 178 0 7.69225e+07 0.0300281 268646 7.73295e+07 5.42845e+06 23897 3.83116e+07 0 0.216635 0.994736 0.7491 7.69225e+07 0.00347305 1.6907e+07 7.20220e+06 1.70626e+07 172 1.70771e+07 1.2045e+07 0.00299607 1.70245e+07 49.9229 0.00347404 0.996556 0 50.2289 GTEX-13FTW-2526-SM-5IJC8 1 B1 2 pieces; incomplete sections (?poor fixation), tissue present is oversized at 20mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 370 471 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991686 173136 0.977001 0.99395 0.816794 22435 1 76 0.00220385 151 0 7.10027e+07 0.0226945 363176 7.14348e+07 9.06399e+06 22458 3.53318e+07 0 0.160207 0.99395 0.811853 7.10027e+07 0.0038088 1.56235e+07 6.8535e+06 1.57179e+07 164 1.56825e+07 1.31205e+07 0.00300449 1.58157e+07 50.2114 0.00508402 0.996215 0 50.1506 GTEX-13FTW-2626-SM-5K7WL 1 B1 2 pieces; original image 53397 is pituitary, NOT SKIN; recut of block reveals skin (image 53794) with up to 10% attached and internal fat, epidermis measures 42 microns 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 371 470 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989843 217520 0.972394 0.9925 0.814091 22836 1 76 0.00284236 206 0 7.50369e+07 0.0274121 632835 7.56039e+07 1.38415e+07 22861 3.73407e+07 0 0.158303 0.9925 0.807985 7.50369e+07 0.00450251 1.63588e+07 1.08158e+07 1.64427e+07 181 1.64161e+07 1.19735e+07 0.00367021 1.6576e+07 50.2423 0.0083704 0.995157 0 50.1278 GTEX-13FTW-5001-SM-AN3ZN B1 Heart Heart - Left Ventricle 0006566 160 ChIP-Seq GTEX-13FTW-5013-SM-AN3ZM B1 Muscle Muscle - Skeletal 0011907 373 ChIP-Seq GTEX-13FTX-0004-SM-5CV8K B1 Blood Whole Blood 0013756 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FTX-0004-SM-5HJQL B1 Blood Whole Blood 0013756 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FTX-0004-SM-6WSC4 B1 Blood Whole Blood 0013756 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FTX-0005-SM-5N9F6 B1 8.9 Blood Whole Blood 0013756 BP-44115 RNA isolation_PAXgene Blood RNA (Manual) 09/30/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.970484 675946 0.970429 0.972183 0.829345 19851 1 76 0.00408669 123 0 9.26485e+07 0.0289305 594281 9.52994e+07 4.97639e+06 19859 4.60645e+07 0 0.141084 0.972183 0.806275 9.26485e+07 0.00415486 2.12136e+07 1.02092e+08 2.14814e+07 162 2.15042e+07 2.36547e+07 0.00412071 2.13623e+07 49.8345 0.00623594 0.973883 0 50.3136 GTEX-13FTX-0226-SM-5K7TX 0 B1 6 pieces; includes small detached contaminating fragments of spleen 8.1 Blood Vessel Artery - Aorta 0001496 154 1103 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986592 232739 0.976406 0.988973 0.839674 22773 1 76 0.00424324 182 0 8.93985e+07 0.0231951 355110 9.03953e+07 6.07476e+06 22794 4.44379e+07 0 0.136732 0.988973 0.830415 8.93985e+07 0.00485799 1.94197e+07 6.8329e+06 1.95487e+07 200 1.95853e+07 1.74271e+07 0.00454988 1.95926e+07 50.0094 0.00392841 0.991354 0 50.1655 GTEX-13FTX-0326-SM-5J2NG 0 B1 2 pieces; pleura is present (target is 1cm below pleura), some atelectasis 7.5 Lung Lung 0008952 162 1095 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984124 165898 0.972056 0.988099 0.805393 24626 1 76 0.00439003 139 0 7.55311e+07 0.0275652 448778 7.64409e+07 4.04557e+06 24654 3.74994e+07 0 0.166662 0.988099 0.795808 7.55311e+07 0.00615692 1.66604e+07 7.18868e+06 1.68264e+07 156 1.68783e+07 1.30038e+07 0.00526992 1.68882e+07 50.0147 0.00587092 0.992074 0 50.2479 GTEX-13FTX-0526-SM-5IFGS 0 B1 4 pieces 9.1 Esophagus Esophagus - Mucosa 0006920 166 1091 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989838 209182 0.975565 0.99258 0.838171 21275 1 76 0.00238264 148 0 6.37862e+07 0.0239819 529777 6.42631e+07 7.41017e+06 21287 3.17355e+07 0 0.137394 0.99258 0.831952 6.37862e+07 0.00363509 1.42342e+07 9.65903e+06 1.42978e+07 148 1.43054e+07 1.28078e+07 0.00300713 1.43958e+07 50.1576 0.00824388 0.995322 0 50.1114 GTEX-13FTX-0626-SM-5J2NS 0 B1 2 pieces 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 168 1089 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983331 193364 0.977443 0.987651 0.837788 23278 1 76 0.00431079 164 0 8.10707e+07 0.0223165 886983 8.20844e+07 4.70413e+06 23293 4.02462e+07 0 0.139656 0.987651 0.827442 8.10707e+07 0.00606114 1.78340e+07 8.50453e+06 1.80873e+07 192 1.80914e+07 1.27404e+07 0.00518214 1.81505e+07 50.0815 0.0108057 0.991972 0 50.3525 GTEX-13FTX-0726-SM-5N9BI 1 B1 6 pieces; all pieces include mucosa and muscularis, generally well preserved mucosa except for superficial glands 5.7 Stomach Stomach 0000945 173 1084 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.987955 153626 0.980724 0.988829 0.846417 22367 1 76 0.00277526 354 0 9.1763e+07 0.0189383 842439 9.27997e+07 4.44767e+06 22386 4.57253e+07 0 0.134307 0.988829 0.836962 9.1763e+07 0.0032713 2.09388e+07 7.26341e+07 2.11687e+07 296 2.10756e+07 2.16486e+07 0.00302307 2.11116e+07 50.0426 0.00907804 0.989703 0 50.2729 GTEX-13FTX-0926-SM-5IFF7 0 B1 2 pieces 6.3 Ovary Ovary 0000992 174 1083 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989058 344670 0.965985 0.992526 0.744427 24760 1 76 0.00214234 171 0 8.50173e+07 0.0337873 309759 8.56575e+07 9.63128e+06 24805 4.22467e+07 0 0.221558 0.992526 0.738863 8.50173e+07 0.00362919 1.8673e+07 9.37114e+06 1.87357e+07 192 1.87898e+07 1.34325e+07 0.00288317 1.89077e+07 50.1563 0.00361625 0.995994 0 50.0837 GTEX-13FTX-1026-SM-5J2O5 0 B1 2 pieces; myometrium only 7.5 Uterus Uterus 0000995 177 1080 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984209 196030 0.970395 0.988199 0.79 23009 1 76 0.00432498 141 0 7.02781e+07 0.0292756 224155 7.11174e+07 3.94178e+06 23033 3.48815e+07 0 0.180396 0.988199 0.780677 7.02781e+07 0.00595359 1.52996e+07 5.87748e+06 1.53908e+07 141 1.54563e+07 1.20242e+07 0.005136 1.54955e+07 50.0634 0.0031519 0.99219 0 50.1486 GTEX-13FTX-1126-SM-5N9EN 0 B1 2 pieces; central defect in one piece, fat and fibrous tissue with few ductal/lobular elements, small portion of skeletal muscle 5.7 Breast Breast - Mammary Tissue 0008367 181 1076 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.989128 347166 0.977665 0.990441 0.842916 23056 1 76 0.00384903 273 0 9.79031e+07 0.0220872 1.06107e+06 9.8848e+07 4.88207e+06 23077 4.86618e+07 0 0.134749 0.990441 0.834859 9.79031e+07 0.00389549 2.15911e+07 1.10405e+07 2.1637e+07 317 2.15903e+07 1.53476e+07 0.00387223 2.17596e+07 50.1952 0.0107344 0.991754 0 50.0531 GTEX-13FTX-1226-SM-5IFGN 0 B1 2 pieces; well preserved, islets well visualized, ~20% is fibrofatty tissue 6.1 Pancreas Pancreas 0001150 183 1074 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988992 196448 0.979909 0.992313 0.846121 21725 1 76 0.00245034 102 0 7.08479e+07 0.0199202 280448 7.13967e+07 8.33807e+06 21736 3.52294e+07 0 0.133789 0.992313 0.839617 7.08479e+07 0.00392511 1.62409e+07 1.77758e+07 1.63871e+07 119 1.63798e+07 1.97067e+07 0.00318526 1.64816e+07 50.155 0.00392802 0.995634 0 50.2241 GTEX-13FTX-1526-SM-5K7VJ 1 B1 6 pieces; include up to 10-20% attached fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 187 1070 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986764 252570 0.974876 0.989164 0.81946 23635 1 76 0.00436934 242 0 9.62385e+07 0.0248997 634302 9.72928e+07 6.71065e+06 23659 4.7847e+07 0 0.155416 0.989164 0.81058 9.62385e+07 0.00503646 2.10732e+07 1.15299e+07 2.12805e+07 235 2.12751e+07 1.66968e+07 0.00470209 2.13083e+07 50.039 0.00651952 0.991564 0 50.2447 GTEX-13FTX-1826-SM-5J1NX 1 B1 6 pieces; each with residual attached fat up to ~15%, epidermis is ~30 microns thick 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 213 1044 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989388 192048 0.975865 0.991189 0.82489 23298 1 76 0.00395158 210 0 8.42913e+07 0.0238774 788034 8.50406e+07 4.54875e+06 23318 4.19305e+07 0 0.150975 0.991189 0.817622 8.42913e+07 0.0046686 1.83906e+07 7.99541e+06 1.84512e+07 197 1.84422e+07 1.51691e+07 0.00430944 1.85477e+07 50.1425 0.00926656 0.99299 0 50.0823 GTEX-13FTX-2026-SM-5L3D6 0 B1 2 pieces; skeletal muscle with 5-10% internal fat 6.2 Muscle Muscle - Skeletal 0011907 218 1039 BP-46453 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988623 306689 0.980788 0.992777 0.86096 19661 1 76 0.00285905 180 0 7.40747e+07 0.0189342 619516 7.46136e+07 7.11623e+06 19675 3.681e+07 0 0.119828 0.992777 0.854742 7.40747e+07 0.00388725 1.63388e+07 8.14362e+06 1.64072e+07 176 1.64766e+07 1.46874e+07 0.003371 1.65501e+07 50.1113 0.00830299 0.996932 0 50.1044 GTEX-13FTX-2226-SM-5J1OP 0 B1 2 pieces; well trimmed, small fragment of skeletal muscle 6.8 Blood Vessel Artery - Tibial 0007610 221 1036 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98805 243200 0.974915 0.989491 0.811215 21770 1 76 0.00391693 276 0 1.06856e+08 0.0247347 868718 1.07991e+08 6.14537e+06 21801 5.30698e+07 0 0.1637 0.989491 0.80269 1.06856e+08 0.00467097 2.29974e+07 7.82984e+06 2.3136e+07 298 2.30905e+07 1.82865e+07 0.0042934 2.31898e+07 50.1073 0.00804436 0.990932 0 50.1501 GTEX-13FTX-5011-SM-AN3Z6 B1 Muscle Muscle - Skeletal 0011907 220 ChIP-Seq GTEX-13FTY-0004-SM-5DU5P B1 Blood Whole Blood 0013756 570 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FTY-0004-SM-5HJQG B1 Blood Whole Blood 0013756 570 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FTY-0004-SM-6WSBL B1 Blood Whole Blood 0013756 570 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FTY-0005-SM-5NQ78 B1 8.4 Blood Whole Blood 0013756 570 BP-44115 RNA isolation_PAXgene Blood RNA (Manual) 09/30/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.984465 393559 0.974155 0.98605 0.792485 18134 1 76 0.0025032 97 0 6.25714e+07 0.0251551 256868 6.34566e+07 5.399e+06 18138 3.11584e+07 0 0.181669 0.98605 0.78143 6.25714e+07 0.00348673 1.43526e+07 7.70726e+07 1.46331e+07 111 1.46386e+07 1.49674e+07 0.00299418 1.44573e+07 49.6884 0.00404793 0.987635 0 50.4838 GTEX-13FTY-0011-R11a-SM-5IJEA B1, A1 7 Brain Brain - Cerebellar Hemisphere 0002037 579 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987208 708118 0.946364 0.988787 0.744321 24341 1 76 0.00468753 270 0 1.02247e+08 0.0532755 2.65607e+06 1.03406e+08 6.21375e+06 24378 5.08043e+07 0 0.202044 0.988787 0.735974 1.02247e+08 0.00486716 2.19747e+07 2.09189e+07 2.21221e+07 278 2.21482e+07 1.09721e+07 0.0047772 2.21133e+07 49.9606 0.0256858 0.990366 0 50.1671 GTEX-13FTY-0011-R1a-SM-5LZXE B1, A1 5.9 Brain Brain - Hippocampus 0001954 579 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.988557 719850 0.964283 0.989601 0.820476 20645 1 76 0.00290082 371 0 9.92909e+07 0.0356254 1.40445e+07 1.00334e+08 5.3131e+06 20655 4.94648e+07 0 0.143807 0.989601 0.811943 9.92909e+07 0.00321249 2.09949e+07 6.26039e+07 2.17847e+07 351 2.14636e+07 4.57989e+06 0.00305649 2.13987e+07 49.9243 0.139977 0.990645 0 50.9231 GTEX-13FTY-0011-R9b-SM-5KM2U B1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 579 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990489 548835 0.956156 0.99225 0.848666 21650 1 76 0.00300959 288 0 7.82331e+07 0.0435515 5.51097e+06 7.88441e+07 4.61457e+06 21662 3.8919e+07 0 0.10749 0.99225 0.842089 7.82331e+07 0.00400152 1.72464e+07 1.62413e+07 1.76037e+07 269 1.72886e+07 8.68643e+06 0.00350468 1.76973e+07 50.5841 0.069897 0.994011 0 50.5126 GTEX-13FTY-0126-SM-5J2NZ 1 B1 2 pieces; mild fibrosis, hemosiderin-laden macrophages, some features of emphysema, atelectasis, focus of degenerating material and organisms 6.5 Lung Lung 0008952 718 606 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982427 146604 0.972843 0.986414 0.716788 24392 1 76 0.00480288 138 0 8.64882e+07 0.0266874 519653 8.76794e+07 4.74593e+06 24431 4.28888e+07 0 0.256054 0.986414 0.70705 8.64882e+07 0.00645376 1.90617e+07 7.93337e+06 1.91863e+07 163 1.9283e+07 1.18477e+07 0.00562498 1.92898e+07 50.0088 0.00592674 0.990402 0 50.1628 GTEX-13FTY-0226-SM-5IJBW 0 B1 2 pieces; <10% attached/internal fat, vessels, and small portion of tendon 7.5 Muscle Muscle - Skeletal 0011907 719 605 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991918 172159 0.981182 0.994105 0.859394 20587 1 76 0.00201746 157 0 7.52064e+07 0.0185938 828512 7.56524e+07 1.00579e+07 20598 3.74463e+07 0 0.121788 0.994105 0.854328 7.52064e+07 0.00346041 1.63915e+07 7.53715e+06 1.6364e+07 178 1.63771e+07 1.57708e+07 0.00273735 1.65354e+07 50.2405 0.0109516 0.996291 0 49.9581 GTEX-13FTY-0326-SM-5L3DN 1 B1 2 pieces; well trimmed, 1 includes ~10% internal fat 7 Nerve Nerve - Tibial 0001323 721 603 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.982 174373 0.966042 0.986034 0.73295 23678 1 76 0.00326508 147 0 6.84052e+07 0.0336218 205820 6.93741e+07 6.93507e+06 23712 3.39601e+07 0 0.233093 0.986034 0.722714 6.84052e+07 0.00430514 1.50287e+07 5.92861e+06 1.50712e+07 145 1.51405e+07 1.04433e+07 0.00378298 1.52161e+07 50.1245 0.00296681 0.990069 0 50.0707 GTEX-13FTY-0426-SM-5IJC2 1 B1 2 pieces; intimal thickening and early atherosclerotic change 7.4 Blood Vessel Artery - Tibial 0007610 724 600 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989599 147613 0.976259 0.992529 0.842651 20894 1 76 0.0021872 146 0 6.87059e+07 0.0233451 384020 6.92231e+07 9.12988e+06 20905 3.4128e+07 0 0.133608 0.992529 0.836356 6.87059e+07 0.00396056 1.46449e+07 5.53179e+06 1.47713e+07 160 1.47489e+07 1.35739e+07 0.00307126 1.48644e+07 50.1949 0.00554757 0.995459 0 50.2148 GTEX-13FTY-0526-SM-5L3EV 1 B1 6 pieces; 5-15% attached and internal fat, epidermis measures 37 microns, detached fragment of skeletal muscle 6 Skin Skin - Sun Exposed (Lower leg) 0004264 727 597 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986349 469305 0.953015 0.990204 0.715416 23682 1 76 0.00322852 153 0 7.29413e+07 0.0468075 563202 7.36629e+07 7.3949e+06 23712 3.62459e+07 0 0.2376 0.990204 0.708408 7.29413e+07 0.00410858 1.57314e+07 2.08964e+07 1.57907e+07 155 1.58448e+07 9.51202e+06 0.00366684 1.59395e+07 50.1489 0.00764567 0.994059 0 50.0942 GTEX-13FTY-0626-SM-5L3F8 1 B1 2 pieces 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 727 597 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987552 177315 0.975746 0.991388 0.781614 22942 1 76 0.00327215 137 0 6.62173e+07 0.0239422 417096 6.67926e+07 6.63856e+06 22967 3.2898e+07 0 0.194132 0.991388 0.774883 6.62173e+07 0.00418437 1.46481e+07 6.53014e+06 1.46529e+07 147 1.47163e+07 1.07222e+07 0.0037265 1.48186e+07 50.1733 0.00624465 0.995224 0 50.0083 GTEX-13FTY-0726-SM-5J2OH 2 B1 2 pieces; some fibrosis, few larger vessels 6.4 Thyroid Thyroid 0002046 731 593 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982824 203365 0.966901 0.987099 0.751399 25033 1 76 0.00454025 143 0 8.34344e+07 0.0327516 267332 8.45249e+07 4.60274e+06 25070 4.13843e+07 0 0.215502 0.987099 0.741706 8.34344e+07 0.006259 1.82087e+07 8.90505e+06 1.82974e+07 156 1.84266e+07 1.39997e+07 0.0053959 1.84137e+07 49.9824 0.00316276 0.991374 0 50.1215 GTEX-13FTY-2126-SM-5IFFB 1 B1 6 pieces; well trimmed 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 758 566 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989088 165990 0.976183 0.991813 0.815748 22736 1 76 0.00222402 178 0 7.21218e+07 0.0235678 330430 7.27171e+07 8.03423e+06 22759 3.58638e+07 0 0.160435 0.991813 0.80907 7.21218e+07 0.00378655 1.58162e+07 8.30741e+06 1.58858e+07 178 1.58712e+07 1.21541e+07 0.00300314 1.6025e+07 50.2411 0.00454405 0.994538 0 50.1098 GTEX-13FTY-2226-SM-5J1ND 1 B1 2 pieces; oversized with central defect in one piece, fibrocystic change 6.5 Breast Breast - Mammary Tissue 0008367 762 562 BP-46482 RNA Extraction from Paxgene-derived Lysate Plate Based 12/03/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988205 182463 0.96985 0.989942 0.683101 25815 1 76 0.00427488 142 0 8.74707e+07 0.0297418 340250 8.83594e+07 4.65546e+06 25872 4.34881e+07 0 0.286749 0.989942 0.676231 8.74707e+07 0.00484137 1.93511e+07 8.28668e+06 1.94057e+07 164 1.9444e+07 1.24877e+07 0.00455763 1.94596e+07 50.0201 0.00385075 0.991679 0 50.0704 GTEX-13FTY-2826-SM-5J2ML 1 B1 1 piece; adenohypophysis and neurohypophysis 6.3 Pituitary Pituitary 0000007 818 506 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983282 291043 0.956636 0.987485 0.735663 25741 1 76 0.0044956 137 0 8.12365e+07 0.0431236 463784 8.2266e+07 4.55521e+06 25788 4.02983e+07 0 0.220973 0.987485 0.726456 8.12365e+07 0.00623902 1.72901e+07 1.13696e+07 1.73679e+07 157 1.74636e+07 1.19757e+07 0.0053636 1.75118e+07 50.0689 0.00563761 0.991689 0 50.1122 GTEX-13FTZ-0004-SM-5DU3W B1 Blood Whole Blood 0013756 1017 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FTZ-0004-SM-5HJPA B1 Blood Whole Blood 0013756 1017 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FTZ-0004-SM-6WSAY B1 Blood Whole Blood 0013756 1017 BP-44087 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/30/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FTZ-0005-SM-5NQ9N B1 8.2 Blood Whole Blood 0013756 1017 BP-44115 RNA isolation_PAXgene Blood RNA (Manual) 09/30/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.95569 352898 0.981187 0.958482 0.799036 19476 1 76 0.00280376 118 0 9.43315e+07 0.0161731 309195 9.84176e+07 1.42382e+07 19485 4.68281e+07 0 0.18215 0.958482 0.765862 9.43315e+07 0.00610696 2.21423e+07 1.47083e+08 2.24538e+07 148 2.23983e+07 2.52128e+07 0.00445055 2.24874e+07 50.0993 0.00314166 0.961275 0 50.3493 GTEX-13FTZ-0011-R10a-SM-AHZ6S B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 970 ChIP-Seq GTEX-13FTZ-0011-R10b-SM-5KLZS B1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 970 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988459 527215 0.959127 0.990665 0.818029 23751 1 76 0.00380071 267 0 8.46457e+07 0.0406319 5.37077e+06 8.54433e+07 3.93102e+06 23765 4.21099e+07 0 0.141098 0.990665 0.810393 8.46457e+07 0.00484284 1.81193e+07 2.90436e+07 1.84771e+07 279 1.82221e+07 7.20533e+06 0.00432061 1.85421e+07 50.4353 0.0628577 0.992871 0 50.4887 GTEX-13FTZ-0011-R10b-SM-CYKOZ B1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 970 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 RIP-Seq GTEX-13FTZ-0126-SM-5K7V3 2 B1 6 pieces; atherosclerosis, thick adventitia 6.5 Blood Vessel Artery - Aorta 0001496 1006 1336 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.982479 216373 0.970552 0.985176 0.735863 23206 1 76 0.00485253 134 0 7.61402e+07 0.0290957 131292 7.72858e+07 5.2939e+06 23239 3.77418e+07 0 0.234689 0.985176 0.724955 7.61402e+07 0.00570909 1.64864e+07 6.55069e+06 1.65784e+07 152 1.66266e+07 1.10954e+07 0.00527964 1.66375e+07 50.0163 0.00169878 0.987874 0 50.1391 GTEX-13FTZ-0226-SM-5K7X6 1 B1 2 pieces; some interstitial fibrosis and few boxcar nuclei suggesting myocyte hypertrophy 6 Heart Heart - Left Ventricle 0006566 1025 1317 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990482 114792 0.983353 0.993153 0.845618 20340 1 76 0.00269307 263 0 7.13146e+07 0.0165563 6.22112e+06 7.18062e+07 1.30199e+07 20350 3.55079e+07 0 0.137735 0.993153 0.839828 7.13146e+07 0.00404754 1.63411e+07 2.07172e+07 1.55738e+07 266 1.56271e+07 5.14226e+06 0.00336848 1.6437e+07 51.263 0.0866377 0.995825 0 48.7979 GTEX-13FTZ-0226-SM-CYKR9 1 B1 2 pieces; some interstitial fibrosis and few boxcar nuclei suggesting myocyte hypertrophy 6 Heart Heart - Left Ventricle 0006566 1025 1317 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13FTZ-0326-SM-5J1O1 2 B1 2 pieces; myocyte hypertrophy and interstitial fibrosis, ? ischemic change 6.1 Heart Heart - Atrial Appendage 0006631 1031 1311 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987698 216073 0.978671 0.989673 0.76119 25250 1 76 0.00415549 271 0 1.11396e+08 0.0210584 3.39014e+06 1.12558e+08 6.37612e+06 25295 5.53481e+07 0 0.217481 0.989673 0.753329 1.11396e+08 0.00489936 2.46997e+07 1.58264e+07 2.48499e+07 329 2.48885e+07 1.44879e+07 0.00452668 2.48685e+07 49.9798 0.030119 0.991647 0 50.1516 GTEX-13FTZ-0526-SM-5IJCW 2 B1 2 pieces; congestion, hemorrhage, and edema; one piece is oversized 6.3 Lung Lung 0008952 1042 1300 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.986757 230826 0.973621 0.990047 0.740128 24797 1 76 0.00257017 161 0 7.93801e+07 0.0257246 167998 8.01781e+07 1.10303e+07 24830 3.94014e+07 0 0.233493 0.990047 0.732762 7.93801e+07 0.00422319 1.76537e+07 1.18371e+07 1.76793e+07 175 1.77087e+07 1.18538e+07 0.00339393 1.78818e+07 50.2432 0.00209531 0.993336 0 50.0362 GTEX-13FTZ-0726-SM-5IFFY 2 B1 2 pieces; moderate macrovesicular steatosis with some fibrosis 5.8 Liver Liver 0001114 1026 1316 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989804 296897 0.970566 0.992879 0.819286 21388 1 76 0.00232432 268 0 8.42815e+07 0.0293267 1.72173e+06 8.4886e+07 8.97296e+06 21407 4.19003e+07 0 0.15128 0.992879 0.813452 8.42815e+07 0.00378132 1.82795e+07 1.8294e+07 1.84955e+07 277 1.84021e+07 9.59431e+06 0.00305056 1.85958e+07 50.2618 0.0202829 0.995953 0 50.2937 GTEX-13FTZ-2226-SM-5LZXI 0 B1 2 pieces; minimal internal fat 7.7 Muscle Muscle - Skeletal 0011907 1298 1044 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992834 267995 0.983657 0.993868 0.873071 20082 1 76 0.00292344 154 0 8.08644e+07 0.016112 991843 8.13633e+07 4.6341e+06 20093 4.02659e+07 0 0.110586 0.993868 0.867718 8.08644e+07 0.00333452 1.75407e+07 8.50279e+06 1.77189e+07 194 1.77208e+07 1.67687e+07 0.00312877 1.76113e+07 49.845 0.0121903 0.994901 0 50.2528 GTEX-13FXS-0004-SM-5DU61 B1 Blood Whole Blood 0013756 452 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13FXS-0004-SM-5HJPR B1 Blood Whole Blood 0013756 452 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13FXS-0004-SM-6WSB8 B1 Blood Whole Blood 0013756 452 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13FXS-0006-SM-5O99X B1 7.9 Blood Whole Blood 0013756 452 BP-44279 RNA isolation_PAXgene Blood RNA (Manual) 10/04/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.971145 564966 0.972475 0.975183 0.790616 18830 1 76 0.00240004 114 0 8.13977e+07 0.0260432 364880 8.34692e+07 1.22942e+07 18836 4.03757e+07 0 0.181859 0.975183 0.770996 8.13977e+07 0.00439084 1.87657e+07 9.98054e+07 1.88103e+07 139 1.88286e+07 1.92247e+07 0.00339132 1.91073e+07 50.3673 0.00437143 0.97922 0 50.0594 GTEX-13FXS-0011-R10a-SM-5J2MA B1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 502 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984183 681025 0.960294 0.987812 0.848627 24518 1 76 0.0045301 371 0 1.06527e+08 0.0393311 3.98074e+06 1.07842e+08 5.58686e+06 24543 5.28462e+07 0 0.111667 0.987812 0.838283 1.06527e+08 0.00634295 2.32492e+07 2.18778e+07 2.33289e+07 355 2.32965e+07 1.24757e+07 0.0054332 2.3639e+07 50.3649 0.0369128 0.991441 0 50.0856 GTEX-13FXS-0011-R10a-SM-AHZ6T B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 502 ChIP-Seq GTEX-13FXS-0011-R11a-SM-5L3DM B1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 502 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987575 501301 0.946211 0.991222 0.755584 23211 1 76 0.00345439 157 0 7.4682e+07 0.0533831 1.01e+06 7.53434e+07 7.84307e+06 23236 3.71012e+07 0 0.190627 0.991222 0.748951 7.4682e+07 0.00421165 1.60965e+07 1.54625e+07 1.61099e+07 173 1.61854e+07 9.64574e+06 0.00383163 1.62682e+07 50.1276 0.0134053 0.994869 0 50.0208 GTEX-13FXS-0011-R1a-SM-5K7U6 B1, A1 6.9 Brain Brain - Hippocampus 0001954 502 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987786 1.02941e+06 0.95152 0.990154 0.841149 24189 1 76 0.00476748 272 0 1.02551e+08 0.0482354 4.9979e+06 1.03571e+08 7.0855e+06 24211 5.09806e+07 0 0.110371 0.990154 0.832868 1.02551e+08 0.00522634 2.21028e+07 3.05908e+07 2.25246e+07 330 2.24267e+07 1.09199e+07 0.00499636 2.24384e+07 50.013 0.0482559 0.992522 0 50.4725 GTEX-13FXS-0011-R2b-SM-5K7XX B1, A1 6.5 Brain Brain - Substantia nigra 0002038 502 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990513 662204 0.959914 0.99293 0.823763 24269 1 76 0.00306855 373 0 9.59451e+07 0.039867 7.3843e+06 9.66284e+07 1.69358e+07 24291 4.77573e+07 0 0.136151 0.99293 0.817939 9.59451e+07 0.00420086 2.10447e+07 2.96625e+07 2.10269e+07 335 2.08958e+07 8.90782e+06 0.00363332 2.14055e+07 50.6025 0.0764196 0.995346 0 49.9788 GTEX-13FXS-0011-R5b-SM-5LZYE B1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 502 BP-46332 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990574 418707 0.959334 0.991942 0.818262 22976 1 76 0.00359068 153 0 6.74955e+07 0.0403968 3.16086e+06 6.80438e+07 3.65145e+06 22993 3.35572e+07 0 0.141072 0.991942 0.811668 6.74955e+07 0.00401796 1.46201e+07 1.54597e+07 1.48819e+07 189 1.48396e+07 6.69945e+06 0.00380402 1.4753e+07 49.8537 0.0464533 0.99331 0 50.4437 GTEX-13FXS-0011-R6b-SM-5L3F7 B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 502 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988328 796618 0.947388 0.991984 0.797385 24232 1 76 0.00349671 199 0 7.73310e+07 0.0522534 3.70819e+06 7.79559e+07 8.18772e+06 24250 3.84396e+07 0 0.150003 0.991984 0.790993 7.73310e+07 0.00416991 1.66538e+07 2.88211e+07 1.66511e+07 232 1.66668e+07 8.39635e+06 0.00383207 1.68931e+07 50.3372 0.0475678 0.99564 0 49.9959 GTEX-13FXS-0011-R7a-SM-5L3FC B1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 502 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987531 555796 0.960823 0.991316 0.809728 23162 1 76 0.00350735 198 0 7.5153e+07 0.0388791 4.35885e+06 7.58114e+07 7.16346e+06 23174 3.73456e+07 0 0.151094 0.991316 0.802697 7.5153e+07 0.00422183 1.62968e+07 2.74866e+07 1.62539e+07 233 1.61826e+07 7.21875e+06 0.00386323 1.66149e+07 50.659 0.057496 0.995101 0 49.934 GTEX-13FXS-0011-R8a-SM-5J1MN B1, A1 7.8 Brain Brain - Hypothalamus 0001898 502 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988507 963504 0.948298 0.99025 0.817748 25163 1 76 0.00437219 372 0 1.00841e+08 0.0514894 5.23079e+06 1.01834e+08 5.38064e+06 25181 5.01172e+07 0 0.13055 0.99025 0.809775 1.00841e+08 0.00511073 2.17895e+07 3.1138e+07 2.19203e+07 343 2.18037e+07 9.59779e+06 0.00474081 2.20892e+07 50.3253 0.0513661 0.991993 0 50.1496 GTEX-13FXS-0011-R9a-SM-5K7UI B1, A1 8.2 Brain Brain - Spinal cord (cervical c-1) 0006469 502 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987578 641076 0.957127 0.989935 0.79745 25037 1 76 0.00455544 286 0 9.8653e+07 0.0424324 1.88896e+06 9.9656e+07 6.53114e+06 25072 4.90283e+07 0 0.159677 0.989935 0.789424 9.8653e+07 0.00509493 2.17212e+07 1.73233e+07 2.19862e+07 276 2.19174e+07 1.41234e+07 0.00482454 2.20145e+07 50.1105 0.0189548 0.992293 0 50.3032 GTEX-13FXS-0226-SM-5IJCK 1 B1 7 pieces; predominantly well trimmed with minimal attached fat, up to 30% internal fat, epidermis measures 37 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 566 1046 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989369 256370 0.974244 0.99211 0.819328 22723 1 76 0.00248234 191 0 7.522e+07 0.0253327 341401 7.58182e+07 9.50873e+06 22743 3.73813e+07 0 0.154916 0.99211 0.812864 7.522e+07 0.00431763 1.63136e+07 1.09016e+07 1.63082e+07 175 1.62977e+07 1.35375e+07 0.00339745 1.65253e+07 50.3467 0.00450289 0.994852 0 49.9918 GTEX-13FXS-0326-SM-5K7TV 1 B1 2 pieces; includes small portion of attached tendon and fat 8.3 Muscle Muscle - Skeletal 0011907 567 1045 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987288 213841 0.984437 0.989585 0.886461 20435 1 76 0.00425158 196 0 9.49484e+07 0.0152541 1.18026e+06 9.59477e+07 6.26419e+06 20443 4.72376e+07 0 0.0979763 0.989585 0.877228 9.49484e+07 0.00472486 2.06766e+07 9.13855e+06 2.07576e+07 205 2.08183e+07 2.1777e+07 0.00448767 2.08228e+07 50.0054 0.0123011 0.991882 0 50.0978 GTEX-13FXS-0726-SM-5LZXJ 1 B1 2 pieces; occasional lymphoid aggregates 7.2 Thyroid Thyroid 0002046 660 952 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.99022 201775 0.968081 0.990434 0.78705 23943 1 76 0.00367846 138 0 6.45171e+07 0.0312179 127542 6.51402e+07 3.83519e+06 23969 3.20292e+07 0 0.181031 0.990434 0.779521 6.45171e+07 0.00412989 1.42077e+07 7.90234e+06 1.4209e+07 141 1.42591e+07 1.17023e+07 0.00390413 1.41817e+07 49.864 0.00195796 0.990649 0 50.0024 GTEX-13FXS-1026-SM-62LFQ 1 B1 2 pieces; 10-20% is fibrous/fatty, interstitial and focal patchy fibrosis 6.7 Heart Heart - Atrial Appendage 0006631 665 947 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987941 182512 0.977547 0.991476 0.829104 22210 1 76 0.00324973 265 0 8.50735e+07 0.0223044 3.54262e+06 8.58049e+07 6.39853e+06 22232 4.23029e+07 0 0.148443 0.991476 0.822036 8.50735e+07 0.00384312 1.85803e+07 1.70972e+07 1.88043e+07 280 1.86802e+07 8.88862e+06 0.00354537 1.89397e+07 50.3449 0.041287 0.995012 0 50.2997 GTEX-13FXS-1126-SM-5IJBB 1 B1 2 pieces; calcific atherosclerosis with concentric narrowing of the lumen, attached fat/nerve (30%) 6.3 Blood Vessel Artery - Coronary 0001621 672 940 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.984365 256683 0.966829 0.987978 0.741121 23266 1 76 0.0026358 143 0 7.11788e+07 0.0328604 226672 7.20449e+07 9.87247e+06 23299 3.53162e+07 0 0.225708 0.987978 0.732211 7.11788e+07 0.00453188 1.53737e+07 8.31297e+06 1.545e+07 155 1.54744e+07 1.06319e+07 0.00358037 1.55999e+07 50.202 0.00314626 0.991592 0 50.1238 GTEX-13FXS-1326-SM-62LFR 1 B1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 675 937 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.985922 244729 0.974318 0.989489 0.811484 22927 1 76 0.00301652 151 0 7.25403e+07 0.0251742 256882 7.33109e+07 5.13939e+06 22949 3.60138e+07 0 0.162834 0.989489 0.802954 7.25403e+07 0.00382819 1.59204e+07 9.4013e+06 1.60443e+07 161 1.60422e+07 1.35604e+07 0.00342089 1.61713e+07 50.2003 0.00350401 0.993056 0 50.1938 GTEX-13FXS-2826-SM-5LZYC 2 B1 2 pieces; glands sloughed 6.2 Prostate Prostate 0002367 717 895 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989631 220179 0.967221 0.990509 0.795621 24779 1 76 0.00361769 142 0 6.5565e+07 0.032528 765601 6.61933e+07 4.0391e+06 24805 3.25697e+07 0 0.1716 0.990509 0.78807 6.5565e+07 0.00415314 1.44718e+07 7.10279e+06 1.46346e+07 159 1.46506e+07 8.94125e+06 0.00388518 1.45179e+07 49.7725 0.0115661 0.991387 0 50.2796 GTEX-13FXS-3026-SM-5LZYO 1 B1 2 pieces; Purkinje cells well visualized, fragment of skeletal muscle 7.4 Brain Brain - Cerebellum 0002037 766 846 BP-45782 RNA Extraction from Paxgene-derived Lysate Plate Based 11/14/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989928 259605 0.950576 0.99103 0.729387 23203 1 76 0.00363235 126 0 6.58137e+07 0.0490376 816605 6.64094e+07 3.57536e+06 23229 3.27341e+07 0 0.221188 0.99103 0.722845 6.58137e+07 0.00393758 1.42977e+07 9.95414e+06 1.43871e+07 141 1.44331e+07 8.40465e+06 0.0037848 1.43206e+07 49.8042 0.0122965 0.992132 0 50.1559 GTEX-13FXS-3126-SM-5J2NN 1 B1 3 pieces; some attached meninges 7 Brain Brain - Cortex 0001870 767 845 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983572 391260 0.957724 0.987846 0.791559 25597 1 76 0.0047144 269 0 1.03072e+08 0.0418341 2.13013e+06 1.0434e+08 5.98159e+06 25627 5.11484e+07 0 0.166165 0.987846 0.781938 1.03072e+08 0.00635225 2.23649e+07 1.92276e+07 2.26033e+07 270 2.27299e+07 1.33863e+07 0.00552978 2.26334e+07 49.8937 0.0204153 0.99212 0 50.265 GTEX-13FXS-3126-SM-CYKQ2 1 B1 3 pieces; some attached meninges 7 Brain Brain - Cortex 0001870 767 845 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 RIP-Seq GTEX-13G51-0004-SM-5CV8L B1 Blood Whole Blood 0013756 730 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13G51-0004-SM-5HJPG B1 Blood Whole Blood 0013756 730 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13G51-0004-SM-6WSBK B1 Blood Whole Blood 0013756 730 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13G51-0005-SM-5N9EP B1 8.8 Blood Whole Blood 0013756 730 BP-44279 RNA isolation_PAXgene Blood RNA (Manual) 10/04/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.957976 497076 0.97965 0.959635 0.789123 20532 1 76 0.00435117 122 0 1.03075e+08 0.0194634 216663 1.07411e+08 5.09759e+06 20551 5.12181e+07 0 0.190527 0.959635 0.75727 1.03075e+08 0.00438418 2.39621e+07 1.39424e+08 2.42017e+07 164 2.41959e+07 2.61002e+07 0.00436765 2.41472e+07 49.9496 0.00201715 0.961295 0 50.2487 GTEX-13G51-0011-R10a-SM-AHZ6X B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 725 ChIP-Seq GTEX-13G51-0011-R10b-SM-5LZYF B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990669 443869 0.96367 0.991931 0.845498 22473 1 76 0.00308406 196 0 6.75176e+07 0.0359188 3.04406e+06 6.80669e+07 3.73172e+06 22484 3.35793e+07 0 0.118171 0.991931 0.838676 6.75176e+07 0.00345662 1.46868e+07 1.59831e+07 1.49316e+07 208 1.49095e+07 7.45518e+06 0.0032701 1.47876e+07 49.7948 0.0447217 0.993193 0 50.4132 GTEX-13G51-0011-R10b-SM-CYKS7 B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 RIP-Seq GTEX-13G51-0011-R11b-SM-5J2NE B1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 725 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981431 511107 0.941751 0.985681 0.749591 23852 1 76 0.00454814 152 0 7.9629e+07 0.0579082 973251 8.07857e+07 4.39593e+06 23876 3.94768e+07 0 0.19216 0.985681 0.738858 7.9629e+07 0.00635689 1.70069e+07 1.69709e+07 1.71223e+07 170 1.7187e+07 9.75947e+06 0.00544861 1.72588e+07 50.1042 0.0120473 0.989932 0 50.1691 GTEX-13G51-0011-R1a-SM-5LZYR B1, A1 8 Brain Brain - Hippocampus 0001954 725 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991448 453270 0.959178 0.992534 0.809759 23980 1 76 0.00317657 163 0 6.70465e+07 0.040453 1.51325e+06 6.75508e+07 3.64792e+06 24009 3.33552e+07 0 0.149419 0.992534 0.803713 6.70465e+07 0.00350127 1.47006e+07 1.10706e+07 1.48001e+07 181 1.47961e+07 8.68094e+06 0.00333874 1.47743e+07 49.9631 0.0224017 0.99362 0 50.1686 GTEX-13G51-0011-R2b-SM-5LZXS B1, A1 6.1 Brain Brain - Substantia nigra 0002038 725 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992636 294003 0.963826 0.993114 0.847429 22375 1 76 0.00311159 162 0 6.17663e+07 0.0359416 5.93104e+06 6.21946e+07 3.36328e+06 22387 3.07464e+07 0 0.116397 0.993114 0.841593 6.17663e+07 0.00338337 1.36622e+07 1.34018e+07 1.37635e+07 188 1.36846e+07 6.33131e+06 0.00324741 1.37705e+07 50.1563 0.0953626 0.993591 0 50.1846 GTEX-13G51-0011-R5a-SM-5L3EB B1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 725 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.980105 720217 0.948427 0.98381 0.803812 24161 1 76 0.0031146 199 0 7.52866e+07 0.0511693 2.5016e+06 7.65255e+07 7.74704e+06 24186 3.7405e+07 0 0.144615 0.98381 0.790799 7.52866e+07 0.00392168 1.62355e+07 2.17934e+07 1.62383e+07 212 1.63091e+07 9.57667e+06 0.00351662 1.64285e+07 50.1824 0.0326897 0.987516 0 50.0044 GTEX-13G51-0011-R6b-SM-5LZX4 B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 725 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992184 499531 0.955115 0.992756 0.838791 23105 1 76 0.00317956 161 0 6.48716e+07 0.0445668 4.40629e+06 6.5345e+07 3.4755e+06 23121 3.22578e+07 0 0.116324 0.992756 0.832715 6.48716e+07 0.00358758 1.41841e+07 1.59639e+07 1.42824e+07 194 1.42464e+07 7.41666e+06 0.00338345 1.42677e+07 50.0374 0.0674312 0.993328 0 50.1726 GTEX-13G51-0011-R7b-SM-5LZXG B1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 725 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992403 645887 0.947596 0.993031 0.823875 22687 1 76 0.00312105 156 0 6.83021e+07 0.0521053 3.77804e+06 6.87814e+07 3.78523e+06 22700 3.39868e+07 0 0.123721 0.993031 0.818133 6.83021e+07 0.00350331 1.46917e+07 2.2345e+07 1.49507e+07 202 1.4912e+07 7.28665e+06 0.00331206 1.47853e+07 49.7866 0.0549282 0.993658 0 50.4368 GTEX-13G51-0011-R8b-SM-5LZZ4 B1, A1 7.9 Brain Brain - Hypothalamus 0001898 725 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990737 3.10517e+06 0.95599 0.991535 0.798419 32054 1 76 0.00319161 655 0 4.45066e+08 0.043504 1.1798e+07 4.48865e+08 2.51557e+07 32168 2.21415e+08 0 0.157572 0.991535 0.79166 4.45066e+08 0.00348019 9.70878e+07 1.03195e+08 9.7523e+07 573 9.771e+07 6.07486e+07 0.00333578 9.72785e+07 49.8894 0.026284 0.992333 0 50.1118 GTEX-13G51-0226-SM-CYKUT 1 B1 2 pieces; patchy interstitial fibrosis, myocyte hypertrophy 5.6 Heart Heart - Left Ventricle 0006566 747 1013 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13G51-0426-SM-5K7Z5 1 B1 2 pieces; congestion and hemorrhage 7 Lung Lung 0008952 754 1006 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989471 102291 0.976407 0.992093 0.741551 22851 1 76 0.00302068 132 0 6.61567e+07 0.0230209 192521 6.6684e+07 1.2227e+07 22888 3.28961e+07 0 0.234856 0.992093 0.735688 6.61567e+07 0.00413132 1.46885e+07 5.96638e+06 1.47522e+07 140 1.47952e+07 1.0736e+07 0.00357453 1.48124e+07 50.029 0.00288706 0.994716 0 50.1083 GTEX-13G51-0426-SM-CYKUU 1 B1 2 pieces; congestion and hemorrhage 7 Lung Lung 0008952 754 1006 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 RIP-Seq GTEX-13G51-0526-SM-5IJCQ 1 B1 2 pieces; ~10% fibrovascular component 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 756 1004 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.9892 207349 0.969129 0.991787 0.792077 23184 1 76 0.00230438 136 0 6.20374e+07 0.0306155 409119 6.25511e+07 7.53842e+06 23210 3.08472e+07 0 0.177052 0.991787 0.785572 6.20374e+07 0.00408514 1.36368e+07 7.01851e+06 1.36597e+07 151 1.36451e+07 9.35908e+06 0.00319244 1.38083e+07 50.2972 0.00654056 0.994374 0 50.042 GTEX-13G51-0826-SM-5K7VB 1 B1 2 pieces; sclerosis of tubules with only focal residual spermatogenesis, portion of rete testis 6.3 Testis Testis 0000473 764 996 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.985379 168488 0.970564 0.987629 0.736222 24941 1 76 0.00460812 162 0 8.52089e+07 0.0291211 333242 8.62762e+07 5.91208e+06 24994 4.23416e+07 0 0.234342 0.987629 0.727114 8.52089e+07 0.00505339 1.88044e+07 7.92604e+06 1.89024e+07 168 1.89703e+07 1.33011e+07 0.00483025 1.89219e+07 49.9362 0.0038625 0.989879 0 50.1301 GTEX-13G51-0926-SM-5IFFU 0 B1 6 pieces; pseudodiverticulosis (outlined); few pieces include small portion of muscularis propria 7.3 Esophagus Esophagus - Mucosa 0006920 770 990 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988951 218437 0.972217 0.992028 0.774821 23450 1 76 0.00238031 142 0 6.94189e+07 0.0275163 346414 6.99767e+07 8.16708e+06 23468 3.45222e+07 0 0.197397 0.992028 0.768644 6.94189e+07 0.00398754 1.54472e+07 8.70122e+06 1.55737e+07 157 1.56266e+07 1.11602e+07 0.00318143 1.56023e+07 49.9611 0.00495042 0.995104 0 50.2038 GTEX-13G51-1026-SM-5K7YQ 1 B1 6 pieces; up to 20% of attached fat, nerve, and vessels 6.2 Esophagus Esophagus - Muscularis 0004648 775 985 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989392 119685 0.964709 0.992026 0.76991 22052 1 76 0.00279939 113 0 5.49195e+07 0.0351245 892734 5.53609e+07 1.05767e+07 22069 2.73188e+07 0 0.194799 0.992026 0.763771 5.49195e+07 0.00413982 1.18458e+07 6.16796e+06 1.18517e+07 137 1.18431e+07 6.46378e+06 0.00346783 1.19851e+07 50.2979 0.0161257 0.99466 0 50.0125 GTEX-13G51-1226-SM-5K7Z3 1 B1 2 pieces; interstitial fibrosis with associated atrophy of follicles, both include region of fat and large vessels (10% and 30%) 6.2 Thyroid Thyroid 0002046 783 977 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988682 123670 0.966864 0.991259 0.687693 23728 1 76 0.00280566 116 0 6.00718e+07 0.0328773 240120 6.06015e+07 1.09622e+07 23766 2.98723e+07 0 0.279171 0.991259 0.681682 6.00718e+07 0.00409698 1.32081e+07 6.25908e+06 1.32296e+07 129 1.32602e+07 7.62969e+06 0.00344964 1.33235e+07 50.1191 0.00396228 0.993837 0 50.0407 GTEX-13G51-1826-SM-5KLZH 1 B1 6 pieces; hair-bearing skin with small amount of internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 807 953 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98586 183133 0.973328 0.988018 0.789138 23631 1 76 0.00393773 148 0 7.4213e+07 0.0264111 425065 7.5113e+07 3.47431e+06 23657 3.68963e+07 0 0.18419 0.988018 0.779682 7.4213e+07 0.00502312 1.619e+07 8.776e+06 1.62814e+07 156 1.63246e+07 1.28085e+07 0.00447924 1.6298e+07 49.9591 0.005659 0.990175 0 50.1406 GTEX-13G51-2126-SM-5IJD9 1 B1 6 pieces; well trimmed 6.8 Colon Colon - Sigmoid 0001159 827 933 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989183 170785 0.96928 0.992292 0.828479 21981 1 76 0.00216567 135 0 6.57923e+07 0.0305026 609351 6.63034e+07 8.6435e+06 21999 3.2704e+07 0 0.140801 0.992292 0.822093 6.57923e+07 0.00388365 1.39974e+07 5.89827e+06 1.40265e+07 159 1.3994e+07 1.1062e+07 0.00302197 1.42252e+07 50.4097 0.00919034 0.995401 0 50.0519 GTEX-13G51-2326-SM-5LZXV 2 B1 2 pieces; fibromuscular stroma predominates, glands largely autolyzed, focal prostatitis 5.8 Prostate Prostate 0002367 832 928 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989158 189037 0.96456 0.989985 0.787631 23691 1 76 0.0033506 128 0 5.8439e+07 0.035256 1.15075e+06 5.90302e+07 3.46532e+06 23722 2.90347e+07 0 0.176929 0.989985 0.779743 5.8439e+07 0.0038705 1.27798e+07 6.26241e+06 1.29871e+07 151 1.29875e+07 6.89404e+06 0.00361033 1.28319e+07 49.6987 0.0194943 0.990812 0 50.4023 GTEX-13G51-2426-SM-5LZY8 1 B1 2 pieces; excellent specimen, mild chronic inflammation, small fragment of lip/stroma 7.7 Salivary Gland Minor Salivary Gland 0006330 829 931 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.989838 256888 0.971447 0.990743 0.779367 22978 1 76 0.00370695 171 0 5.59059e+07 0.0270862 200590 5.64282e+07 3.15383e+06 23004 2.77609e+07 0 0.19208 0.990743 0.772153 5.59059e+07 0.00414954 1.26175e+07 1.06022e+07 1.27103e+07 134 1.27637e+07 9.15564e+06 0.00392804 1.26168e+07 49.7107 0.00355478 0.991649 0 50.1831 GTEX-13G51-2526-SM-5LZYK 1 B1 6 pieces; solar elastosis, epidermis measures 41 um thick 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 925 835 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991342 291124 0.975323 0.992179 0.841004 23776 1 76 0.00323101 191 0 8.17254e+07 0.0242921 480193 8.23696e+07 4.4891e+06 23801 4.06672e+07 0 0.134319 0.992179 0.834426 8.17254e+07 0.00369952 1.77605e+07 9.20393e+06 1.78175e+07 199 1.7847e+07 1.54601e+07 0.00346507 1.77985e+07 49.932 0.00582974 0.993016 0 50.0801 GTEX-13G51-2626-SM-5LZYW 1 B1 2 pieces; ~15% fibrovascular tissue 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 925 835 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.986637 155994 0.976707 0.986994 0.836534 22116 1 76 0.00328887 143 0 6.09657e+07 0.0229592 344966 6.17690e+07 3.43901e+06 22130 3.02867e+07 0 0.140173 0.986994 0.825654 6.09657e+07 0.00374284 1.34586e+07 6.16604e+06 1.35025e+07 148 1.35115e+07 1.18683e+07 0.00351577 1.34788e+07 49.9394 0.00558477 0.987351 0 50.0814 GTEX-13G51-2726-SM-5LZZ9 1 B1 2 pieces; no more than 10% internal fat, small portion of tendon 8.1 Muscle Muscle - Skeletal 0011907 927 833 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992426 250234 0.983381 0.993356 0.865691 19728 1 76 0.00282451 156 0 6.94158e+07 0.0164529 962585 6.98801e+07 3.92047e+06 19737 3.45724e+07 0 0.11769 0.993356 0.85994 6.94158e+07 0.00313034 1.53225e+07 9.75215e+06 1.54388e+07 172 1.54067e+07 1.3082e+07 0.00297728 1.54071e+07 50.0007 0.0137748 0.994286 0 50.1889 GTEX-13G51-2726-SM-CYKUZ 1 B1 2 pieces; no more than 10% internal fat, small portion of tendon 8.1 Muscle Muscle - Skeletal 0011907 927 833 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 RIP-Seq GTEX-13G51-2826-SM-5LZWV 1 B1 2 pieces; well trimmed, minimal internal fat 6 Nerve Nerve - Tibial 0001323 928 832 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990222 225272 0.966008 0.991159 0.750116 23971 1 76 0.00331793 155 0 7.01142e+07 0.0337031 256475 7.07396e+07 4.05569e+06 24004 3.48387e+07 0 0.215892 0.991159 0.743484 7.01142e+07 0.00375335 1.54065e+07 5.91585e+06 1.54252e+07 156 1.54484e+07 1.07267e+07 0.00353544 1.54535e+07 50.0082 0.00362562 0.992096 0 50.0302 GTEX-13G51-2926-SM-5IJDL 1 B1 2 pieces; well trimmed; intimal thickening 7.7 Blood Vessel Artery - Tibial 0007610 930 830 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991143 241059 0.973443 0.99339 0.813676 22625 1 76 0.00215271 165 0 7.34236e+07 0.0261758 256319 7.39122e+07 8.7698e+06 22649 3.6523e+07 0 0.159767 0.99339 0.808297 7.34236e+07 0.00359675 1.58646e+07 6.00171e+06 1.59783e+07 168 1.59522e+07 1.3782e+07 0.0028731 1.60494e+07 50.1519 0.00346789 0.995636 0 50.1787 GTEX-13G51-3026-SM-5IJB8 1 B1 2 pieces 5.9 Brain Brain - Cortex 0001870 983 777 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989276 229324 0.962684 0.992463 0.785528 24026 1 76 0.00223187 213 0 8.17443e+07 0.0370085 2.22931e+06 8.23651e+07 1.09674e+07 24056 4.06328e+07 0 0.177156 0.992463 0.779607 8.17443e+07 0.00410199 1.79808e+07 9.18088e+06 1.81064e+07 232 1.80163e+07 1.0208e+07 0.00316393 1.83153e+07 50.4115 0.0270662 0.99565 0 50.174 GTEX-13G51-3126-SM-5IJG7 1 B1 2 pieces; one piece with meninges 7.1 Brain Brain - Cerebellum 0002037 984 776 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986072 420333 0.944404 0.987891 0.706361 25007 1 76 0.0050989 201 0 9.81533e+07 0.0552564 1.24306e+06 9.93564e+07 6.59734e+06 25046 4.87715e+07 0 0.238044 0.987891 0.697808 9.81533e+07 0.00523233 2.10927e+07 2.04597e+07 2.13366e+07 233 2.14086e+07 1.19141e+07 0.00516549 2.11883e+07 49.7414 0.0125112 0.98971 0 50.2874 GTEX-13G51-3226-SM-5IFG7 1 B1 1 piece; adenohypophysis and neurohypophysis present 7.2 Pituitary Pituitary 0000007 985 775 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989233 379733 0.956031 0.992326 0.755672 25484 1 76 0.00236431 157 0 7.09903e+07 0.0437267 289062 7.15393e+07 8.60873e+06 25518 3.52939e+07 0 0.200359 0.992326 0.749873 7.09903e+07 0.00386088 1.5068e+07 1.17173e+07 1.52181e+07 166 1.52696e+07 9.99586e+06 0.00311027 1.52261e+07 49.9287 0.0040406 0.995418 0 50.2478 GTEX-13IVO-0004-SM-5DU54 C1 Blood Whole Blood 0013756 471 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13IVO-0004-SM-5HJQQ C1 Blood Whole Blood 0013756 471 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13IVO-0004-SM-6WSBI C1 Blood Whole Blood 0013756 471 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13IVO-0011-R10a-SM-5LZY3 C1, A1 5.8 Brain Brain - Frontal Cortex (BA9) 0009834 480 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990631 534318 0.956797 0.991398 0.84074 20928 1 76 0.00349198 192 0 6.51816e+07 0.0430492 1.04155e+07 6.57472e+07 3.9314e+06 20937 3.23967e+07 0 0.116057 0.991398 0.833508 6.51816e+07 0.00400412 1.42257e+07 2.29832e+07 1.45158e+07 219 1.42877e+07 4.06465e+06 0.00374785 1.45073e+07 50.3813 0.158418 0.992165 0 50.5048 GTEX-13IVO-0011-R10a-SM-AHZMS C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 480 ChIP-Seq GTEX-13IVO-0011-R11b-SM-5LZXQ C1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 480 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 EXCLUDE 0.989182 362900 0.940637 0.98995 0.71672 21892 1 76 0.00354662 154 0 7.51934e+07 0.0590382 2.03635e+06 7.59568e+07 4.28879e+06 21920 3.73952e+07 0 0.223917 0.98995 0.709517 7.51934e+07 0.00377605 1.62898e+07 1.70641e+07 1.63741e+07 182 1.64034e+07 7.38052e+06 0.00366125 1.63172e+07 49.8683 0.0268093 0.990718 0 50.129 GTEX-13IVO-0011-R3b-SM-5IJBJ C1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 480 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989013 376422 0.972683 0.992162 0.857065 20502 1 76 0.00257627 366 0 7.90457e+07 0.0271854 1.6216e+07 7.96701e+07 9.23821e+06 20511 3.92898e+07 0 0.115618 0.992162 0.850348 7.90457e+07 0.00453515 1.76425e+07 3.01913e+07 1.74155e+07 357 1.69435e+07 4.81018e+06 0.0035526 1.83429e+07 51.983 0.203539 0.995311 0 49.6762 GTEX-13IVO-0011-R5a-SM-5L3CY C1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 480 BP-46364 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 EXCLUDE 0.987052 320753 0.973942 0.990842 0.828459 20645 1 76 0.00330118 367 0 9.32297e+07 0.0259617 2.03134e+07 9.40914e+07 9.70524e+06 20652 4.63603e+07 0 0.145484 0.990842 0.820872 9.32297e+07 0.0042841 2.02093e+07 4.5457e+07 2.05873e+07 343 2.02444e+07 5.15617e+06 0.00379076 2.08259e+07 50.7078 0.21589 0.994633 0 50.4633 GTEX-13IVO-0011-R6b-SM-5K7X9 C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 480 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989456 348540 0.968611 0.991932 0.850243 20411 1 76 0.00292576 367 0 9.09844e+07 0.0313067 2.3622e+07 9.17244e+07 1.66449e+07 20419 4.53079e+07 0 0.118368 0.991932 0.843384 9.09844e+07 0.00416486 2.00462e+07 4.12077e+07 2.00409e+07 332 1.94989e+07 3.60849e+06 0.00354376 2.08165e+07 51.634 0.257533 0.994408 0 49.9935 GTEX-13IVO-0011-R8a-SM-5L3DY C1, A1 7.3 Brain Brain - Hypothalamus 0001898 480 BP-46363 RNA isolation_PAXgene Tissue miRNA 12/02/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988737 377748 0.962095 0.992646 0.846778 22318 1 76 0.00326516 196 0 7.04773e+07 0.0377168 1.12344e+07 7.09995e+07 7.15024e+06 22330 3.5027e+07 0 0.115317 0.992646 0.840551 7.04773e+07 0.00423698 1.55353e+07 1.93201e+07 1.56559e+07 236 1.55224e+07 5.85997e+06 0.00374916 1.59223e+07 50.6359 0.158231 0.996555 0 50.1934 GTEX-13IVO-0126-SM-5J1NG 1 C1 6 pieces; solar elastosis, attenuation of the epidermis:21.67um thick; up to 25% dermal fat 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 556 1202 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986966 259346 0.975023 0.98924 0.790603 24313 1 76 0.00414777 226 0 9.58219e+07 0.0247231 355864 9.68641e+07 5.43889e+06 24347 4.763e+07 0 0.184421 0.98924 0.782096 9.58219e+07 0.00497131 2.10397e+07 9.76018e+06 2.11436e+07 214 2.11646e+07 1.68172e+07 0.00455859 2.12301e+07 50.0773 0.00367385 0.991514 0 50.1232 GTEX-13IVO-0226-SM-5LZXU 1 C1 2 pieces; fat with 10% to 20% of fibrovascular tissue 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 558 1201 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991791 442925 0.974771 0.992664 0.8058 24964 1 76 0.00318844 383 0 1.41478e+08 0.0249077 453058 1.42523e+08 8.22575e+06 25015 7.0377e+07 0 0.168971 0.992664 0.799888 1.41478e+08 0.00365311 3.09603e+07 1.39996e+07 3.11879e+07 393 3.12142e+07 2.53549e+07 0.00342057 3.10659e+07 49.8809 0.00317884 0.993536 0 50.1831 GTEX-13IVO-0426-SM-5LZY7 1 C1 2 pieces; less than 1mm of external fat and small amount of internal fat 6.5 Nerve Nerve - Tibial 0001323 571 1189 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990912 215924 0.968317 0.991555 0.749867 22637 1 76 0.00328764 151 0 6.14501e+07 0.031399 210847 6.19735e+07 3.10902e+06 22666 3.05635e+07 0 0.21845 0.991555 0.743534 6.14501e+07 0.00369984 1.35961e+07 5.85408e+06 1.36448e+07 135 1.3668e+07 9.87377e+06 0.00349361 1.36147e+07 49.9023 0.00340221 0.992198 0 50.0894 GTEX-13IVO-0626-SM-5LZYJ 1 C1 2 pieces; moderate atrophy with 30% of internal fat; 7.1 Muscle Muscle - Skeletal 0011907 577 1184 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991909 243395 0.976836 0.99298 0.834138 20678 1 76 0.00303866 126 0 5.82543e+07 0.0229172 653035 5.86661e+07 3.09126e+06 20690 2.89937e+07 0 0.142698 0.99298 0.828282 5.82543e+07 0.00342259 1.27106e+07 5.56549e+06 1.28082e+07 132 1.28037e+07 1.14512e+07 0.00323042 1.27713e+07 49.9367 0.0111314 0.994051 0 50.1912 GTEX-13IVO-0626-SM-CYKS8 1 C1 2 pieces; moderate atrophy with 30% of internal fat; 7.1 Muscle Muscle - Skeletal 0011907 577 1184 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 RIP-Seq GTEX-13IVO-0726-SM-5LZYV 1 C1 6 pieces; hair bearing skin; 3 pieces with up to 50% external fat, fourth piece with 20% internal fat and remaining two pieces with minimal amount of internal/external fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 584 1177 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990347 217525 0.979398 0.991438 0.824414 21140 1 76 0.00325712 152 0 6.14382e+07 0.0203642 631583 6.19687e+07 3.61364e+06 21151 3.05462e+07 0 0.154984 0.991438 0.817356 6.14382e+07 0.00385585 1.3591e+07 6.51999e+06 1.36276e+07 150 1.36453e+07 1.10301e+07 0.00355616 1.36464e+07 50.002 0.010192 0.99253 0 50.0672 GTEX-13IVO-0926-SM-5KLZP 2 C1 2 pieces; patchy interstitial fibrosis and variably sized follicles; small amount of external fat attached to one piece 6.1 Thyroid Thyroid 0002046 612 1150 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986816 237760 0.960335 0.989187 0.74334 23552 1 76 0.00390816 147 0 7.65957e+07 0.039395 863908 7.7433e+07 3.45678e+06 23575 3.80649e+07 0 0.216994 0.989187 0.735303 7.65957e+07 0.00499844 1.66712e+07 1.20841e+07 1.67815e+07 154 1.68312e+07 1.25167e+07 0.00445199 1.67987e+07 49.9517 0.0111568 0.991558 0 50.1648 GTEX-13IVO-2426-SM-5K7V9 1 C1 2 pieces; less than 10% of fibrovascular component 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 652 1118 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.981402 244232 0.971548 0.984041 0.816795 23218 1 76 0.00434503 176 0 8.77434e+07 0.0282139 1.12792e+06 8.91664e+07 6.36635e+06 23242 4.35395e+07 0 0.154752 0.984041 0.80376 8.77434e+07 0.00522731 1.94006e+07 1.51442e+07 1.9524e+07 195 1.95536e+07 1.58302e+07 0.00478499 1.96042e+07 50.0647 0.0126496 0.98668 0 50.1584 GTEX-13IVO-2926-SM-5L3CZ 2 C1 4 pieces;focally meninges attached 6.1 Brain Brain - Cortex 0001870 666 1107 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986144 898267 0.933189 0.990595 0.798419 22299 1 76 0.00334381 153 0 6.82055e+07 0.066534 7.35731e+06 6.88531e+07 6.81478e+06 22312 3.38547e+07 0 0.134769 0.990595 0.79091 6.82055e+07 0.00458062 1.45317e+07 3.86482e+07 1.46997e+07 195 1.4593e+07 5.86452e+06 0.00395944 1.49349e+07 50.5788 0.106855 0.995045 0 50.2874 GTEX-13IVO-3026-SM-5J2M2 2 C1 1 piece; mostly adenohypophysis 7 Pituitary Pituitary 0000007 667 1107 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983753 282833 0.966036 0.987825 0.759883 25649 1 76 0.00440341 204 0 1.03252e+08 0.0336892 1.83095e+06 1.04525e+08 5.88966e+06 25696 5.1251e+07 0 0.206153 0.987825 0.750632 1.03252e+08 0.00601851 2.27139e+07 1.34948e+07 2.28867e+07 238 2.30237e+07 1.62522e+07 0.00520763 2.29769e+07 49.9491 0.0175169 0.991898 0 50.1896 GTEX-13JUV-0001-SM-5DU62 B1 Blood Whole Blood 0013756 376 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13JUV-0001-SM-5HJPQ B1 Blood Whole Blood 0013756 376 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13JUV-0001-SM-6WSB6 B1 Blood Whole Blood 0013756 376 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13JUV-0006-SM-5NQ97 B1 8.5 Blood Whole Blood 0013756 376 BP-44279 RNA isolation_PAXgene Blood RNA (Manual) 10/04/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.981936 662983 0.959061 0.983633 0.705254 19010 1 76 0.00264667 99 0 7.00382e+07 0.040209 51103 7.12035e+07 6.05168e+06 19032 3.48512e+07 0 0.253807 0.983633 0.693712 7.00382e+07 0.00368776 1.54238e+07 7.15608e+07 1.5987e+07 115 1.59836e+07 1.35057e+07 0.00316631 1.55597e+07 49.3281 0.000717703 0.985331 0 50.8965 GTEX-13JUV-0011-R10a-SM-AHZ6O B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 367 ChIP-Seq GTEX-13JUV-0011-R10b-SM-5LZXR B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 367 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991711 460599 0.962829 0.992523 0.848129 22989 1 76 0.00370202 188 0 7.3236e+07 0.0367708 4.05101e+06 7.37876e+07 4.19242e+06 23006 3.64262e+07 0 0.114701 0.992523 0.841788 7.3236e+07 0.00412383 1.60675e+07 1.4546e+07 1.62168e+07 203 1.61488e+07 9.3354e+06 0.00391275 1.61962e+07 50.0733 0.0549009 0.993336 0 50.2311 GTEX-13JUV-0011-R11a-SM-5LZYH B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 367 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990067 411958 0.941569 0.991012 0.756445 23110 1 76 0.0036737 151 0 6.99067e+07 0.0581053 1.55484e+06 7.05408e+07 4.06497e+06 23137 3.47486e+07 0 0.185124 0.991012 0.749646 6.99067e+07 0.00404491 1.49338e+07 1.39534e+07 1.5094e+07 168 1.50874e+07 7.77902e+06 0.00385913 1.501e+07 49.8714 0.0220417 0.991956 0 50.2669 GTEX-13JUV-0011-R1a-SM-5LZY4 B1, A1 7.5 Brain Brain - Hippocampus 0001954 367 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990619 634471 0.958283 0.99149 0.827481 23303 1 76 0.00350395 202 0 7.66814e+07 0.0412865 1.99028e+06 7.73396e+07 4.10476e+06 23323 3.81546e+07 0 0.130802 0.99149 0.820439 7.66814e+07 0.00385203 1.67679e+07 1.79758e+07 1.69377e+07 211 1.69255e+07 1.05556e+07 0.00367784 1.68531e+07 49.8928 0.0257343 0.992361 0 50.252 GTEX-13JUV-0011-R5a-SM-5LZY5 B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 367 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.993278 512599 0.956121 0.993929 0.825091 23776 1 76 0.00365375 200 0 7.66046e+07 0.0435825 3.91913e+06 7.70726e+07 4.1219e+06 23793 3.81394e+07 0 0.131031 0.993929 0.820082 7.66046e+07 0.00390391 1.65583e+07 2.03649e+07 1.68871e+07 224 1.68088e+07 9.24928e+06 0.00377875 1.6686e+07 49.8167 0.0508499 0.99458 0 50.4915 GTEX-13JUV-0011-R6b-SM-5LZYG B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 367 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991146 608500 0.948386 0.992042 0.809007 22928 1 76 0.00398257 143 0 6.27454e+07 0.0513871 4.21576e+06 6.32487e+07 3.31646e+06 22940 3.1205e+07 0 0.139379 0.992042 0.802569 6.27454e+07 0.00441533 1.34334e+07 2.2068e+07 1.36773e+07 167 1.35644e+07 5.71209e+06 0.00419875 1.36083e+07 50.0808 0.0666536 0.992939 0 50.4499 GTEX-13JUV-0011-R7b-SM-5LZZG B1, A1 5.8 Brain Brain - Putamen (basal ganglia) 0001874 367 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990567 563355 0.961003 0.991589 0.828708 20812 1 76 0.00445045 151 0 6.38676e+07 0.0386878 7.16892e+06 6.44094e+07 3.57722e+06 20820 3.1751e+07 0 0.132295 0.991589 0.821737 6.38676e+07 0.00493359 1.34964e+07 3.05887e+07 1.40776e+07 187 1.37535e+07 3.78009e+06 0.00469177 1.38606e+07 50.194 0.111302 0.99261 0 51.0538 GTEX-13JUV-0011-R9a-SM-5LZX3 B1, A1 8.1 Brain Brain - Spinal cord (cervical c-1) 0006469 367 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.992378 398992 0.95911 0.993176 0.810471 23523 1 76 0.00362851 230 0 7.98386e+07 0.0405569 2.2475e+06 8.03872e+07 4.25807e+06 23549 3.97396e+07 0 0.148639 0.993176 0.80494 7.98386e+07 0.00391385 1.76185e+07 1.25735e+07 1.79053e+07 227 1.7753e+07 1.10087e+07 0.00377107 1.78244e+07 50.1003 0.0279584 0.993974 0 50.4037 GTEX-13JUV-0226-SM-5IJCC 1 B1 2 pieces; 20-40% fat/fibrous, scattered chronic inflammation 6.1 Heart Heart - Atrial Appendage 0006631 448 1236 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988654 200445 0.976063 0.992046 0.796076 22210 1 76 0.0028429 154 0 7.64824e+07 0.0237433 2.36529e+06 7.70956e+07 1.12593e+07 22231 3.80235e+07 0 0.179987 0.992046 0.789744 7.64824e+07 0.00448082 1.66814e+07 1.06665e+07 1.65858e+07 184 1.66255e+07 1.03494e+07 0.00365906 1.68709e+07 50.3663 0.03068 0.995439 0 49.8563 GTEX-13JUV-0526-SM-5K7XE 1 B1 2 pieces; includes pleura (target is 1 cm below pleura), congestion, hemorrhage, numerous hemosiderin-laden macrophages, patchy pneumonia 6.8 Lung Lung 0008952 463 1221 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988362 156520 0.973981 0.99115 0.782096 23212 1 76 0.00306247 129 0 6.414e+07 0.0255986 196728 6.47127e+07 1.15779e+07 23232 3.18834e+07 0 0.191885 0.99115 0.775174 6.414e+07 0.00445888 1.41432e+07 7.52545e+06 1.42434e+07 142 1.42647e+07 1.07505e+07 0.00375871 1.42924e+07 50.0486 0.00304002 0.993938 0 50.1765 GTEX-13JUV-0526-SM-CYKUW 1 B1 2 pieces; includes pleura (target is 1 cm below pleura), congestion, hemorrhage, numerous hemosiderin-laden macrophages, patchy pneumonia 6.8 Lung Lung 0008952 463 1221 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 RIP-Seq GTEX-13JUV-0626-SM-5J1MQ 0 B1 2 pieces 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 465 1219 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984186 172441 0.977362 0.985822 0.793107 22503 1 76 0.00435669 161 0 8.26065e+07 0.0223109 651159 8.37946e+07 5.1346e+06 22532 4.09785e+07 0 0.184255 0.985822 0.781862 8.26065e+07 0.00539664 1.82663e+07 8.23632e+06 1.83173e+07 181 1.83123e+07 1.32238e+07 0.0048758 1.84087e+07 50.1312 0.0077709 0.987457 0 50.0697 GTEX-13JUV-2026-SM-5K7UA 0 B1 6 pieces; predominantly well trimmed, few sections include up to ~10% fat 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 523 1161 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985285 229112 0.974737 0.987773 0.756802 24569 1 76 0.00472602 152 0 8.28984e+07 0.0249791 450919 8.39245e+07 5.58239e+06 24608 4.11727e+07 0 0.217935 0.987773 0.747549 8.28984e+07 0.00538971 1.83099e+07 7.98560e+06 1.84517e+07 163 1.85031e+07 1.31711e+07 0.00505703 1.84604e+07 49.9423 0.00537291 0.990262 0 50.1929 GTEX-13JUV-2326-SM-5IJCE 1 B1 2 pieces 7.4 Muscle Muscle - Skeletal 0011907 597 1087 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.99182 214966 0.981834 0.994077 0.877578 19797 1 76 0.00237343 205 0 7.97035e+07 0.0179341 665180 8.01783e+07 1.10029e+07 19808 3.96853e+07 0 0.104256 0.994077 0.87238 7.97035e+07 0.00381507 1.75054e+07 9.30328e+06 1.74879e+07 209 1.74646e+07 1.6376e+07 0.00309262 1.76968e+07 50.3302 0.00829625 0.996335 0 49.975 GTEX-13JUV-2426-SM-5J1NS 1 B1 2 pieces; early atherosclerosis, medial calcific sclerosis, both include attachment of fat/vein (up to 40%) 6.8 Blood Vessel Artery - Tibial 0007610 607 1077 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987252 190808 0.973994 0.989103 0.818495 21799 1 76 0.00421376 150 0 7.40467e+07 0.0256557 293036 7.48625e+07 4.301e+06 21816 3.67753e+07 0 0.155499 0.989103 0.809575 7.40467e+07 0.00507699 1.59321e+07 5.32258e+06 1.60482e+07 160 1.60374e+07 1.3367e+07 0.00464457 1.60767e+07 50.0612 0.00391432 0.990953 0 50.1815 GTEX-13JUV-2526-SM-5J1OD 0 B1 2 pieces; one piece is 30-40% attached fat 5.9 Nerve Nerve - Tibial 0001323 610 1074 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986558 185796 0.963676 0.988466 0.707593 25046 1 76 0.00427153 180 0 9.19413e+07 0.0360687 322039 9.30141e+07 5.1488e+06 25099 4.5679e+07 0 0.256083 0.988466 0.699432 9.19413e+07 0.00497696 2.01479e+07 7.97983e+06 2.01835e+07 187 2.02052e+07 1.25895e+07 0.00462356 2.02934e+07 50.1089 0.00346226 0.990375 0 50.0441 GTEX-13JUV-2626-SM-5N9EB 1 B1 1 pieces; adenohypophysis and neurohypophysis 5.7 Pituitary Pituitary 0000007 653 1031 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987604 434720 0.955004 0.989338 0.739884 26140 1 76 0.00427932 208 0 9.7741e+07 0.0447207 419248 9.87943e+07 5.06335e+06 26187 4.85644e+07 0 0.21512 0.989338 0.731996 9.7741e+07 0.00437618 2.10749e+07 1.6377e+07 2.12147e+07 224 2.123e+07 1.45966e+07 0.00432766 2.12266e+07 49.996 0.00424365 0.991073 0 50.1653 GTEX-13JUV-2726-SM-5LZZ8 1 B1 6 pieces; well trimmed, epidermis measures 34 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 586 1098 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991508 208706 0.973315 0.992249 0.814312 22237 1 76 0.00342889 180 0 6.37239e+07 0.026446 241262 6.42217e+07 3.56321e+06 22256 3.17019e+07 0 0.159003 0.992249 0.808 6.37239e+07 0.00388236 1.38064e+07 6.51785e+06 1.38509e+07 149 1.38613e+07 1.13714e+07 0.00365546 1.38453e+07 49.9712 0.00375671 0.992989 0 50.0805 GTEX-13JUV-2826-SM-5LZWU 0 B1 2 pieces; some central defects in tissue (? poor fixation) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 594 1090 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.982484 217634 0.972154 0.983266 0.794791 22841 1 76 0.00342689 149 0 7.25716e+07 0.0275138 309334 7.38067e+07 3.9596e+06 22860 3.60933e+07 0 0.177363 0.983266 0.781491 7.25716e+07 0.00383384 1.58601e+07 6.34299e+06 1.59437e+07 162 1.59608e+07 1.25441e+07 0.0036302 1.59013e+07 49.9067 0.00419114 0.984048 0 50.1315 GTEX-13JUV-2926-SM-5LZX7 0 B1 2 pieces 5.8 Brain Brain - Cortex 0001870 654 1030 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.991762 391167 0.963716 0.992674 0.823937 22933 1 76 0.00384816 157 0 6.86096e+07 0.0359672 3.99218e+06 6.91159e+07 3.6393e+06 22949 3.41336e+07 0 0.139778 0.992674 0.817901 6.86096e+07 0.0042975 1.49728e+07 1.79367e+07 1.52739e+07 179 1.52066e+07 8.08195e+06 0.00407263 1.50962e+07 49.8178 0.0577607 0.993586 0 50.4978 GTEX-13JUV-3026-SM-5K7WX 1 B1 2 pieces; includes attachment of meninges 6.2 Brain Brain - Cerebellum 0002037 656 1028 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988068 260060 0.941973 0.990664 0.709394 23565 1 76 0.00322666 117 0 6.13586e+07 0.057725 958812 6.19369e+07 1.18912e+07 23589 3.05157e+07 0 0.232579 0.990664 0.702771 6.13586e+07 0.00445027 1.31855e+07 1.40348e+07 1.32541e+07 133 1.3271e+07 7.07692e+06 0.00383686 1.33182e+07 50.0888 0.0154805 0.993259 0 50.1296 GTEX-13JVG-0003-SM-5DU67 B1 Blood Whole Blood 0013756 517 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13JVG-0003-SM-5HJQ2 B1 Blood Whole Blood 0013756 517 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13JVG-0003-SM-6WSBH B1 Blood Whole Blood 0013756 517 BP-44301 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13JVG-0011-R10b-SM-5KM2P B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 527 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989311 474252 0.957115 0.991306 0.829991 22932 1 76 0.00335555 200 0 7.38236e+07 0.0426067 6.1844e+06 7.44711e+07 4.50946e+06 22947 3.67169e+07 0 0.127124 0.991306 0.822775 7.38236e+07 0.00440528 1.61803e+07 1.8072e+07 1.6429e+07 216 1.62455e+07 7.94686e+06 0.00387936 1.65082e+07 50.401 0.0830443 0.993301 0 50.3814 GTEX-13JVG-0011-R11a-SM-5KM53 B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 527 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987417 272512 0.947052 0.989539 0.721446 22832 1 76 0.00356915 124 0 6.32358e+07 0.0525882 1.28369e+06 6.39042e+07 4.20433e+06 22858 3.14367e+07 0 0.225606 0.989539 0.7139 6.32358e+07 0.00437642 1.36888e+07 1.37026e+07 1.37705e+07 142 1.3788e+07 6.60538e+06 0.00397192 1.37937e+07 50.0102 0.0200876 0.991662 0 50.1487 GTEX-13JVG-0011-R1a-SM-5KM32 B1, A1 5.9 Brain Brain - Hippocampus 0001954 527 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988611 961662 0.947467 0.990781 0.803645 22897 1 76 0.00338574 272 0 8.25518e+07 0.0522861 6.63765e+06 8.33199e+07 4.98005e+06 22916 4.10731e+07 0 0.143822 0.990781 0.796236 8.25518e+07 0.00434204 1.77569e+07 3.6428e+07 1.81989e+07 264 1.80431e+07 7.82225e+06 0.00386284 1.80859e+07 50.0592 0.0796647 0.992951 0 50.6147 GTEX-13JVG-0011-R3b-SM-5LZXF B1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 527 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4901 03/23/2014 TruSeq.v1 RNASEQ 0.990136 618846 0.956828 0.991216 0.836647 22033 1 76 0.00348428 197 0 7.00899e+07 0.0429282 7.56877e+06 7.07111e+07 3.97515e+06 22047 3.48674e+07 0 0.120181 0.991216 0.829298 7.00899e+07 0.00396089 1.5234e+07 2.60004e+07 1.54756e+07 218 1.53596e+07 5.94018e+06 0.00372233 1.54289e+07 50.1126 0.107038 0.992296 0 50.3934 GTEX-13JVG-0011-R4a-SM-5MR4C B1, A1 6 Brain Brain - Amygdala 0001876 527 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992709 525130 0.959771 0.993246 0.827096 21366 1 76 0.00306369 269 0 7.55713e+07 0.040074 9.82965e+06 7.60852e+07 2.90721e+06 21377 3.76826e+07 0 0.132675 0.993246 0.82151 7.55713e+07 0.00317071 1.63486e+07 3.37189e+07 1.66873e+07 290 1.63678e+07 5.19453e+06 0.00311717 1.67077e+07 50.5137 0.129193 0.993783 0 50.5127 GTEX-13JVG-0011-R5a-SM-5MR4O B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 527 BP-46932 RNA isolation_PAXgene Tissue miRNA 12/10/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993519 509042 0.961445 0.994227 0.828094 22710 1 76 0.00288423 267 0 7.8112e+07 0.0382618 5.93734e+06 7.85655e+07 2.9499e+06 22724 3.89251e+07 0 0.133352 0.994227 0.823313 7.8112e+07 0.00294841 1.69694e+07 2.56355e+07 1.7224e+07 264 1.70034e+07 8.41287e+06 0.00291629 1.72486e+07 50.3579 0.0755718 0.994936 0 50.3722 GTEX-13JVG-0011-R6a-SM-5MR3E B1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 527 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993544 452143 0.960639 0.993961 0.827102 22546 1 76 0.00301415 267 0 7.97253e+07 0.0391887 9.19704e+06 8.02096e+07 2.84283e+06 22563 3.97494e+07 0 0.133537 0.993961 0.822107 7.97253e+07 0.00299212 1.72431e+07 3.16683e+07 1.7544e+07 272 1.7271e+07 6.70659e+06 0.00300314 1.75535e+07 50.4055 0.114663 0.994378 0 50.4325 GTEX-13JVG-0011-R7b-SM-5MR3Q B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 527 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992055 892997 0.948302 0.992482 0.820682 22870 1 76 0.00299834 269 0 9.43264e+07 0.0515161 1.04893e+07 9.50409e+07 3.70182e+06 22881 4.7027e+07 0 0.12762 0.992482 0.814512 9.43264e+07 0.00305973 2.00825e+07 4.4998e+07 2.07713e+07 328 2.03053e+07 7.53248e+06 0.00302902 2.05736e+07 50.3281 0.110366 0.992908 0 50.843 GTEX-13JVG-0011-R8a-SM-5KM3E B1, A1 6.8 Brain Brain - Hypothalamus 0001898 527 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.98905 477077 0.958416 0.991329 0.816133 23380 1 76 0.00342229 161 0 6.64801e+07 0.0413583 4.39567e+06 6.70616e+07 4.17014e+06 23399 3.30525e+07 0 0.142283 0.991329 0.809056 6.64801e+07 0.00450064 1.45151e+07 1.75016e+07 1.46639e+07 190 1.45196e+07 6.14846e+06 0.00396023 1.48102e+07 50.4954 0.0655467 0.993608 0 50.2549 GTEX-13JVG-0126-SM-5L3D3 1 B1 2 pieces; up to 10% internal fat and small portion of attached tendon 8.3 Muscle Muscle - Skeletal 0011907 824 518 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988777 192046 0.98018 0.99265 0.831139 20188 1 76 0.00298614 132 0 6.32021e+07 0.019585 553854 6.36701e+07 6.24275e+06 20201 3.14172e+07 0 0.149042 0.99265 0.82503 6.32021e+07 0.00394394 1.38996e+07 6.14052e+06 1.3931e+07 144 1.39903e+07 1.21416e+07 0.00346317 1.40596e+07 50.1236 0.00869881 0.996522 0 50.0565 GTEX-13JVG-0226-SM-5J1MW 0 B1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 824 518 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.985507 246205 0.976799 0.98758 0.749693 23490 1 76 0.00421391 166 0 8.53279e+07 0.0229402 887491 8.6401e+07 4.96631e+06 23519 4.23644e+07 0 0.227106 0.98758 0.740382 8.53279e+07 0.00507695 1.89491e+07 8.80297e+06 1.89393e+07 187 1.89378e+07 1.19496e+07 0.00464452 1.91221e+07 50.2421 0.0102718 0.989653 0 49.9871 GTEX-13JVG-0426-SM-5MR59 1 B1 2 pieces; fragmented, calcific atherosclerosis, small attached portion of fat 6.5 Blood Vessel Artery - Tibial 0007610 825 517 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990675 245491 0.975141 0.991138 0.8289 22563 1 76 0.00275784 216 0 9.33313e+07 0.0245093 360401 9.41658e+07 3.65224e+06 22583 4.64657e+07 0 0.146241 0.991138 0.821554 9.33313e+07 0.0029799 2.00872e+07 9.40758e+06 2.02636e+07 227 2.01259e+07 1.83519e+07 0.00286882 2.02808e+07 50.1916 0.0038273 0.991601 0 50.2186 GTEX-13JVG-0526-SM-5IJBN 0 B1 2 pieces; small portion of attached fat (5-10%) 5.9 Nerve Nerve - Tibial 0001323 826 516 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988011 175677 0.967786 0.990628 0.755511 23662 1 76 0.00234365 152 0 7.06555e+07 0.0319406 287817 7.13239e+07 8.69649e+06 23694 3.51127e+07 0 0.212275 0.990628 0.748431 7.06555e+07 0.00416093 1.54862e+07 7.94434e+06 1.55523e+07 161 1.55094e+07 1.07847e+07 0.00324989 1.57123e+07 50.3249 0.00403535 0.993245 0 50.1064 GTEX-13JVG-0726-SM-5KM16 1 B1 6 pieces; relatively well trimmed 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 829 513 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.983481 146108 0.970568 0.986191 0.716286 22716 1 76 0.00413985 130 0 6.67628e+07 0.0292175 637392 6.76976e+07 3.49140e+06 22753 3.31265e+07 0 0.254282 0.986191 0.706395 6.67628e+07 0.00557172 1.47153e+07 7.62732e+06 1.47648e+07 137 1.47954e+07 9.53367e+06 0.00485382 1.4861e+07 50.1106 0.00941528 0.988901 0 50.084 GTEX-13JVG-0926-SM-5IJE1 1 B1 2 pieces; nodular hyperplasia, regressive changes 6.1 Thyroid Thyroid 0002046 832 510 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.981131 223694 0.969966 0.982973 0.71471 24294 1 76 0.00476754 156 0 8.96007e+07 0.0297692 707192 9.11528e+07 5.79285e+06 24339 4.44982e+07 0 0.255256 0.982973 0.702541 8.96007e+07 0.00519625 1.97358e+07 8.34467e+06 1.98706e+07 170 1.99134e+07 1.30518e+07 0.00498149 1.98537e+07 49.9249 0.00775832 0.984815 0 50.1702 GTEX-13JVG-1126-SM-5KM2M 0 B1 2 pieces; one piece is ~10% fatty, interstitial fibrosis 6.9 Heart Heart - Atrial Appendage 0006631 836 506 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989943 194905 0.978166 0.991825 0.797477 22486 1 76 0.00318193 197 0 8.94154e+07 0.0215914 3.27826e+06 9.01523e+07 5.92884e+06 22512 4.45159e+07 0 0.180689 0.991825 0.790958 8.94154e+07 0.00394328 1.89297e+07 1.16531e+07 1.90397e+07 246 1.90859e+07 1.38639e+07 0.00356188 1.90333e+07 49.9311 0.0363636 0.993707 0 50.1448 GTEX-13JVG-1326-SM-5N9F8 0 B1 2 pieces; interstitial fibrosis 5.7 Heart Heart - Left Ventricle 0006566 845 497 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987865 201147 0.985585 0.98951 0.846514 18956 1 76 0.00438159 264 0 8.00633e+07 0.0143596 6.70455e+06 8.0912e+07 3.92193e+06 18962 3.9826e+07 0 0.139071 0.98951 0.837635 8.00633e+07 0.00444181 1.73271e+07 3.23275e+07 1.76609e+07 315 1.72127e+07 3.79979e+06 0.00441165 1.78608e+07 50.9239 0.0828622 0.991156 0 50.4771 GTEX-13JVG-1426-SM-5MR4W 1 B1 2 pieces; congestion, hemorrhage, fibrosis, includes several large vessels, focal chronic inflammation 5.8 Lung Lung 0008952 847 495 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990717 296324 0.972992 0.991368 0.756432 23795 1 76 0.00311661 157 0 8.0744e+07 0.0265446 461680 8.14471e+07 3.32994e+06 23827 4.01695e+07 0 0.21656 0.991368 0.749902 8.0744e+07 0.00329715 1.78556e+07 8.58815e+06 1.79502e+07 182 1.78914e+07 1.21895e+07 0.00320682 1.797e+07 50.1096 0.00566847 0.992019 0 50.132 GTEX-13JVG-2026-SM-5KM1N 1 B1 6 pieces 6.3 Esophagus Esophagus - Mucosa 0006920 862 480 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.983078 214875 0.972394 0.986312 0.78776 23572 1 76 0.0039871 161 0 8.07308e+07 0.0273855 1.05467e+06 8.18511e+07 3.92381e+06 23599 4.00851e+07 0 0.184634 0.986312 0.776977 8.07308e+07 0.00530212 1.77202e+07 8.08111e+06 1.79003e+07 191 1.79115e+07 1.13303e+07 0.00464245 1.79645e+07 50.0738 0.0128852 0.989547 0 50.2528 GTEX-13JVG-2926-SM-5J2N9 0 B1 2 pieces; 20% of one piece and 70% of the second is skeletal muscle, nerve, fat, lip; chronic sialadenitis 6.9 Salivary Gland Minor Salivary Gland 0006330 901 441 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982608 194621 0.969736 0.98669 0.737888 24240 1 76 0.00472094 150 0 7.29487e+07 0.0291253 334115 7.39328e+07 4.20144e+06 24283 3.61527e+07 0 0.231849 0.98669 0.728066 7.29487e+07 0.00649731 1.62954e+07 9.54744e+06 1.63371e+07 145 1.64207e+07 1.0316e+07 0.00560545 1.64977e+07 50.117 0.00451917 0.990773 0 50.0639 GTEX-13JVG-3026-SM-5IJEV 1 B1 1 pieces; adenohypophysis and neurohypophysis 6.5 Pituitary Pituitary 0000007 927 415 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986299 405440 0.957916 0.988235 0.713073 25937 1 76 0.00492292 162 0 9.2636e+07 0.0418377 841174 9.37388e+07 5.97378e+06 25989 4.60196e+07 0 0.244843 0.988235 0.704684 9.2636e+07 0.0052506 1.98087e+07 1.75843e+07 1.99841e+07 188 2.0043e+07 1.24385e+07 0.00508644 1.99207e+07 49.847 0.0089736 0.990171 0 50.2204 GTEX-13JVG-3126-SM-5L3FH 0 B1 2 pieces; includes small portion of meninges 6 Brain Brain - Cortex 0001870 933 409 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987076 468039 0.961112 0.991476 0.819161 23293 1 76 0.00332391 148 0 6.45764e+07 0.0385884 3.53279e+06 6.51316e+07 6.59843e+06 23309 3.20668e+07 0 0.141951 0.991476 0.812179 6.45764e+07 0.00451104 1.41905e+07 1.66709e+07 1.42358e+07 171 1.42586e+07 7.2019e+06 0.00391484 1.44273e+07 50.294 0.0542408 0.995877 0 50.0796 GTEX-13JVG-3226-SM-5IJGJ 1 B1 2 pieces; Purkinje cells are without evidence of hypoxic damage 6.5 Brain Brain - Cerebellum 0002037 932 410 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98548 392038 0.947582 0.987272 0.690374 25441 1 76 0.00516502 274 0 1.09016e+08 0.0520467 1.41213e+06 1.10421e+08 7.43279e+06 25502 5.41533e+07 0 0.257208 0.987272 0.681587 1.09016e+08 0.00537653 2.36926e+07 2.98009e+07 2.38557e+07 264 2.39321e+07 1.20778e+07 0.00527058 2.38047e+07 49.8666 0.0127885 0.989064 0 50.1715 GTEX-13N11-0003-SM-5HJQF B1 Blood Whole Blood 0013756 -92 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13N11-0003-SM-5JVB5 B1 Blood Whole Blood 0013756 -92 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-5029 03/23/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13N11-0003-SM-6WSCJ B1 Blood Whole Blood 0013756 -92 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13N11-0126-SM-5KM2Z 0 B1 2 pieces; congested, includes capsule (target is 5mm below capsule) 6.9 Spleen Spleen 0002106 153 1046 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986329 312833 0.956481 0.988267 0.774251 23850 1 76 0.00420483 132 0 6.82689e+07 0.0417508 289329 6.90794e+07 4.24765e+06 23879 3.38791e+07 0 0.18223 0.988267 0.765167 6.82689e+07 0.00531345 1.48361e+07 1.56626e+07 1.49482e+07 148 1.49615e+07 1.00779e+07 0.00475805 1.49599e+07 49.9975 0.00418836 0.990206 0 50.1882 GTEX-13N11-0226-SM-5KM3C 1 B1 2 pieces; one is 30% fat and fibrovascular tissue 7.2 Pancreas Pancreas 0001150 157 1042 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989701 179538 0.974391 0.991631 0.808883 22091 1 76 0.00356357 102 0 5.84869e+07 0.0252927 143468 5.89805e+07 3.78711e+06 22110 2.9103e+07 0 0.165507 0.991631 0.802114 5.84869e+07 0.00448503 1.31908e+07 1.05039e+07 1.33002e+07 104 1.33387e+07 1.34419e+07 0.0040234 1.32643e+07 49.8602 0.00243247 0.993562 0 50.2064 GTEX-13N11-0326-SM-5LUA3 0 B1 1 piece; some fibrosis, numerous pigmented macrophages 5.7 Lung Lung 0008952 159 1040 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99021 223472 0.965968 0.992076 0.733045 24588 1 76 0.00520523 119 0 6.42975e+07 0.03351 470116 6.48111e+07 5.35968e+06 24619 3.19572e+07 0 0.232923 0.992076 0.727236 6.42975e+07 0.00447013 1.40634e+07 7.43435e+06 1.41385e+07 133 1.41128e+07 8.11995e+06 0.00483837 1.42036e+07 50.1602 0.00725364 0.993941 0 50.1331 GTEX-13N11-0426-SM-5KM3O 0 B1 2 pieces; some hypertrophy 6.8 Heart Heart - Left Ventricle 0006566 159 1040 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990518 172875 0.982152 0.99233 0.8274 21356 1 76 0.00417714 151 0 8.21869e+07 0.0176341 1.52476e+06 8.28221e+07 5.27328e+06 21370 4.09216e+07 0 0.154753 0.99233 0.821054 8.21869e+07 0.00499464 1.77394e+07 1.54601e+07 1.77841e+07 199 1.77085e+07 1.12224e+07 0.00458514 1.79352e+07 50.3179 0.0184101 0.994142 0 50.063 GTEX-13N11-0526-SM-5IJFI 0 B1 2 pieces 7.5 Ovary Ovary 0000992 167 1032 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987181 268553 0.966467 0.988923 0.752048 24389 1 76 0.00485325 148 0 8.44636e+07 0.0331666 154973 8.54097e+07 5.83407e+06 24437 4.19844e+07 0 0.214419 0.988923 0.743717 8.44636e+07 0.00500153 1.84429e+07 9.85718e+06 1.85792e+07 156 1.8616e+07 1.51943e+07 0.00492726 1.8549e+07 49.9098 0.00181447 0.990664 0 50.1841 GTEX-13N11-0626-SM-5J1OL 1 B1 2 pieces; some intimal thickening 7.4 Blood Vessel Artery - Coronary 0001621 164 1035 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988903 165122 0.975587 0.990742 0.849039 20915 1 76 0.00405946 149 0 7.47362e+07 0.024023 293227 7.54346e+07 4.09183e+06 20934 3.71586e+07 0 0.126549 0.990742 0.841179 7.47362e+07 0.00479282 1.58363e+07 4.98285e+06 1.59817e+07 157 1.59082e+07 1.53506e+07 0.00442546 1.60395e+07 50.2054 0.00388717 0.992582 0 50.2285 GTEX-13N11-0726-SM-5L3DP 0 B1 2 pieces 8.4 Heart Heart - Atrial Appendage 0006631 168 1031 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989107 241232 0.975064 0.992903 0.814571 21723 1 76 0.00390047 128 0 7.11734e+07 0.0246382 1.0589e+06 7.16822e+07 7.12706e+06 21740 3.53785e+07 0 0.160493 0.992903 0.80879 7.11734e+07 0.00466862 1.4728e+07 1.13424e+07 1.47489e+07 149 1.46804e+07 1.1342e+07 0.00428308 1.5032e+07 50.5916 0.0147722 0.996698 0 50.0355 GTEX-13N11-0826-SM-5IJFP 0 B1 2 pieces; both include ~15% attached fat 8.9 Adrenal Gland Adrenal Gland 0002369 174 1025 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.988378 220502 0.97466 0.989982 0.79773 23897 1 76 0.00513387 201 0 9.37812e+07 0.0249305 902851 9.47303e+07 5.98268e+06 23937 4.66504e+07 0 0.17693 0.989982 0.789739 9.37812e+07 0.00529462 2.04478e+07 1.11937e+07 2.05428e+07 219 2.0581e+07 1.512e+07 0.00521412 2.05509e+07 49.9634 0.00953076 0.991586 0 50.1158 GTEX-13N11-0926-SM-5IJG2 0 B1 2 pieces; includes capsule (target is 1cm below capsule), mild steatosis and some portal chronic inflammation 8.8 Liver Liver 0001114 170 1029 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987324 267853 0.976828 0.989212 0.803475 23146 1 76 0.00533212 206 0 9.79687e+07 0.0228661 540676 9.9037e+07 6.58041e+06 23174 4.8723e+07 0 0.173352 0.989212 0.794808 9.79687e+07 0.00550573 2.1176e+07 1.82464e+07 2.15026e+07 232 2.14281e+07 1.55786e+07 0.00541876 2.14205e+07 49.991 0.00545933 0.991101 0 50.3826 GTEX-13N11-1026-SM-5K7XQ 1 B1 2 pieces; some interstitial fibrosis, one piece includes ~20% fibrous/vascular tissue 7.7 Thyroid Thyroid 0002046 178 1021 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989077 158095 0.962115 0.991581 0.723193 23268 1 76 0.00295774 113 0 5.76025e+07 0.0375703 109374 5.80915e+07 1.01821e+07 23303 2.86591e+07 0 0.238922 0.991581 0.717105 5.76025e+07 0.00403593 1.25126e+07 6.08305e+06 1.25551e+07 118 1.25783e+07 8.82137e+06 0.00349547 1.26236e+07 50.0898 0.00188279 0.994086 0 50.0849 GTEX-13N11-1126-SM-5KM41 0 B1 2 pieces; myometrium only in this section 7.6 Uterus Uterus 0000995 172 1027 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989793 188466 0.973161 0.991735 0.793825 23255 1 76 0.00339843 143 0 7.71551e+07 0.0264694 162906 7.77981e+07 4.84613e+06 23283 3.83961e+07 0 0.179336 0.991735 0.787264 7.71551e+07 0.00428061 1.6716e+07 6.32585e+06 1.68985e+07 163 1.68828e+07 1.36758e+07 0.00383865 1.68743e+07 49.9875 0.00209396 0.993677 0 50.2715 GTEX-13N11-1226-SM-5KM4D 0 B1 6 pieces; pseudodiverticulosis, includes small portion of muscularis propria (not target) 6.8 Esophagus Esophagus - Mucosa 0006920 188 1011 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.986887 165357 0.975635 0.989152 0.821767 21550 1 76 0.00369702 133 0 6.35007e+07 0.0241228 468340 6.41971e+07 4.36634e+06 21564 3.1589e+07 0 0.153868 0.989152 0.812852 6.35007e+07 0.00462561 1.35465e+07 5.77501e+06 1.38022e+07 142 1.37151e+07 1.01607e+07 0.00416025 1.37646e+07 50.0901 0.00729534 0.991416 0 50.4674 GTEX-13N11-1526-SM-5L3FL 0 B1 6 pieces 7.4 Vagina Vagina 0000996 182 1017 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985901 246918 0.967849 0.990106 0.747507 24070 1 76 0.00347868 139 0 6.68687e+07 0.0318383 191015 6.75369e+07 6.71948e+06 24102 3.32025e+07 0 0.220342 0.990106 0.740111 6.68687e+07 0.00454568 1.45499e+07 6.03173e+06 1.45996e+07 138 1.4666e+07 1.06619e+07 0.00400992 1.47433e+07 50.1315 0.00282831 0.994312 0 50.0852 GTEX-13N11-1726-SM-5J1OJ 0 B1 2 pieces; predominantly fat with some fibrous stroma and rare ductal structure 6.6 Breast Breast - Mammary Tissue 0008367 195 1004 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986211 228720 0.970154 0.988062 0.759839 25293 1 76 0.00438285 154 0 8.40437e+07 0.0294215 243382 8.50591e+07 4.87787e+06 25329 4.1738e+07 0 0.210315 0.988062 0.750769 8.40437e+07 0.00518598 1.84123e+07 8.13222e+06 1.84908e+07 170 1.85091e+07 1.3374e+07 0.00478366 1.8547e+07 50.0512 0.00286133 0.989914 0 50.1064 GTEX-13N11-1826-SM-5IJDS 0 B1 2 pieces; fat with microscopic lymphoid nodule 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 197 1002 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989806 215353 0.973353 0.992428 0.788468 23610 1 76 0.00255158 141 0 7.23217e+07 0.0263143 317355 7.28735e+07 9.59495e+06 23633 3.59756e+07 0 0.184885 0.992428 0.782498 7.23217e+07 0.00416357 1.59205e+07 7.88814e+06 1.60077e+07 154 1.60127e+07 1.28495e+07 0.00335544 1.60959e+07 50.1294 0.00435487 0.99505 0 50.1367 GTEX-13N11-2326-SM-5IJBF 1 B1 6 pieces; well trimmed 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 208 991 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988803 255760 0.97202 0.991951 0.807319 24439 1 76 0.00263037 170 0 7.66421e+07 0.0276706 432409 7.7264e+07 9.07907e+06 24460 3.80873e+07 0 0.164702 0.991951 0.800821 7.66421e+07 0.00462061 1.67488e+07 8.50762e+06 1.67894e+07 172 1.6764e+07 1.37004e+07 0.00362233 1.70112e+07 50.3659 0.00559651 0.9951 0 50.0606 GTEX-13N11-2526-SM-5K7UE 1 B1 6 pieces; up to 60% attached fat, epidermis measures 35 to 50 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 228 971 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987004 153091 0.971506 0.989063 0.797374 24400 1 76 0.00458506 150 0 7.68595e+07 0.0282116 310901 7.77093e+07 4.61678e+06 24423 3.822e+07 0 0.174133 0.989063 0.788653 7.68595e+07 0.0050398 1.67356e+07 7.57461e+06 1.68589e+07 154 1.68797e+07 1.38287e+07 0.00481196 1.68708e+07 49.9868 0.00400082 0.991123 0 50.1835 GTEX-13N11-2626-SM-5K7UQ 1 B1 2 pieces; 30-40% is fibrovascular tissue and nerve 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 230 969 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986734 215458 0.973043 0.988969 0.799433 24607 1 76 0.00457984 176 0 9.45266e+07 0.026597 319543 9.5581e+07 6.29852e+06 24640 4.69869e+07 0 0.17361 0.988969 0.790615 9.45266e+07 0.00513309 2.05451e+07 8.48316e+06 2.06967e+07 199 2.07218e+07 1.70599e+07 0.00485584 2.07244e+07 50.0032 0.00334317 0.991204 0 50.1837 GTEX-13N11-2726-SM-5L3ER 0 B1 2 pieces; minimal attached fat 8.2 Muscle Muscle - Skeletal 0011907 231 968 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989075 154470 0.984655 0.992746 0.870795 19035 1 76 0.00371679 130 0 6.20795e+07 0.0151056 628768 6.25331e+07 6.42855e+06 19038 3.08746e+07 0 0.113859 0.992746 0.864478 6.20795e+07 0.00450221 1.36178e+07 9.47483e+06 1.35822e+07 139 1.35729e+07 1.14722e+07 0.00410805 1.38466e+07 50.4991 0.010055 0.996417 0 49.9346 GTEX-13N11-2826-SM-5KM4Z 1 B1 2 pieces; includes 30 and 50% attached and internal fat 7.5 Nerve Nerve - Tibial 0001323 234 965 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988342 171960 0.966967 0.990353 0.744784 23756 1 76 0.00346475 158 0 6.54503e+07 0.0327026 227303 6.60879e+07 4.30359e+06 23791 3.25477e+07 0 0.222183 0.990353 0.737599 6.54503e+07 0.00441799 1.43728e+07 5.64047e+06 1.44437e+07 139 1.44526e+07 1.04811e+07 0.0039404 1.44884e+07 50.0618 0.00343941 0.992363 0 50.1231 GTEX-13N11-2926-SM-5K7VD 1 B1 2 pieces; artery with significant attachment of veins and adipose tissue (30 and 80%) 6.9 Blood Vessel Artery - Tibial 0007610 244 955 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983617 374078 0.973763 0.985863 0.805558 22329 1 76 0.00463801 139 0 7.58936e+07 0.025836 245932 7.6982e+07 5.46868e+06 22355 3.76417e+07 0 0.168205 0.985863 0.794169 7.58936e+07 0.00545446 1.64202e+07 5.90208e+06 1.64396e+07 152 1.654e+07 1.39549e+07 0.0050453 1.64871e+07 49.92 0.00319467 0.988108 0 50.0296 GTEX-13N11-5028-SM-AN3Z7 B1 Lung Lung 0008952 161 ChIP-Seq GTEX-13N1W-0002-SM-5DU4S C1 Blood Whole Blood 0013756 491 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13N1W-0002-SM-5HJR2 C1 Blood Whole Blood 0013756 491 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13N1W-0002-SM-DO3XO C1 Blood Whole Blood 0013756 491 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-13N1W-0011-R10b-SM-5MR4H C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 549 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993407 522213 0.948812 0.993957 0.818845 25159 1 76 0.00275164 271 0 8.607e+07 0.0508588 3.00458e+06 8.65932e+07 3.11235e+06 25182 4.28982e+07 0 0.129966 0.993957 0.813897 8.607e+07 0.00288982 1.85655e+07 1.978e+07 1.88148e+07 294 1.87035e+07 9.95058e+06 0.00282069 1.87278e+07 50.0325 0.0346977 0.994507 0 50.3335 GTEX-13N1W-0011-R11a-SM-5MR3D C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 549 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 EXCLUDE 0.991685 537486 0.932882 0.99212 0.716754 26148 1 76 0.00300076 273 0 1.09045e+08 0.0668474 4.46597e+06 1.09911e+08 4.28084e+06 26192 5.43339e+07 0 0.216129 0.99212 0.711106 1.09045e+08 0.00296132 2.31083e+07 3.62847e+07 2.3168e+07 303 2.30326e+07 9.59037e+06 0.00298105 2.33014e+07 50.2901 0.0406326 0.992556 0 50.0645 GTEX-13N1W-0011-R1b-SM-5MR4T C1, A1 8.2 Brain Brain - Hippocampus 0001954 549 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993297 704082 0.946093 0.994035 0.787563 24933 1 76 0.00277857 203 0 7.84575e+07 0.0536246 2.65915e+06 7.89283e+07 2.98223e+06 24963 3.90946e+07 0 0.158531 0.994035 0.782865 7.84575e+07 0.00283935 1.70068e+07 2.23338e+07 1.71532e+07 250 1.70864e+07 8.90665e+06 0.00280894 1.71367e+07 50.0734 0.0336906 0.994773 0 50.2144 GTEX-13N1W-0011-R3a-SM-5MR5E C1, A1 7.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 549 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992893 691542 0.95051 0.993392 0.818833 26370 1 76 0.00285364 275 0 1.11713e+08 0.0490922 4.72155e+06 1.12457e+08 4.46353e+06 26394 5.56849e+07 0 0.131677 0.993392 0.813422 1.11713e+08 0.00281212 2.41907e+07 2.89444e+07 2.42966e+07 323 2.41657e+07 1.3625e+07 0.00283289 2.43863e+07 50.2273 0.0419855 0.99389 0 50.1092 GTEX-13N1W-0011-R4a-SM-5MR52 C1, A1 6.3 Brain Brain - Amygdala 0001876 549 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992422 822763 0.940031 0.993093 0.807444 24768 1 76 0.00296306 269 0 8.07425e+07 0.0597142 5.81939e+06 8.1304e+07 3.02815e+06 24782 4.02282e+07 0 0.132587 0.993093 0.801867 8.07425e+07 0.00303853 1.71983e+07 3.19915e+07 1.75348e+07 277 1.73855e+07 8.0287e+06 0.00300077 1.74072e+07 50.0313 0.0715757 0.993764 0 50.4844 GTEX-13N1W-0011-R5b-SM-5MR5Q C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 549 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991938 600073 0.950815 0.992594 0.796276 26456 1 76 0.00300481 269 0 9.05734e+07 0.0488462 4.51928e+06 9.12492e+07 3.65071e+06 26481 4.51132e+07 0 0.15454 0.992594 0.790379 9.05734e+07 0.00309753 1.95428e+07 2.13118e+07 1.97483e+07 281 1.95992e+07 1.04747e+07 0.00305114 1.97644e+07 50.2098 0.0495268 0.99325 0 50.2615 GTEX-13N1W-0011-R6a-SM-5MR43 C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 549 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990904 417332 0.955139 0.991338 0.829538 24294 1 76 0.00282954 205 0 7.19337e+07 0.0445506 3.88491e+06 7.25622e+07 2.73717e+06 24317 3.58545e+07 0 0.125601 0.991338 0.822352 7.19337e+07 0.00287671 1.57485e+07 1.54618e+07 1.5908e+07 222 1.5785e+07 9.03858e+06 0.00285311 1.59079e+07 50.1939 0.0535391 0.991772 0 50.252 GTEX-13N1W-0011-R7b-SM-5MR4F C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 549 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993867 489165 0.955055 0.994155 0.835668 24726 1 76 0.0027721 269 0 8.56401e+07 0.0446324 5.38383e+06 8.61436e+07 3.401e+06 24744 4.26844e+07 0 0.119387 0.994155 0.830784 8.56401e+07 0.00277811 1.85614e+07 2.19903e+07 1.88312e+07 307 1.86822e+07 9.9053e+06 0.0027751 1.87481e+07 50.0881 0.0624983 0.994444 0 50.3608 GTEX-13N1W-0011-R8a-SM-5MR56 C1, A1 7.8 Brain Brain - Hypothalamus 0001898 549 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992681 673758 0.948576 0.99329 0.810862 25641 1 76 0.00283899 272 0 8.99575e+07 0.051103 3.20281e+06 9.05652e+07 3.73592e+06 25669 4.4837e+07 0 0.137714 0.99329 0.805421 8.99575e+07 0.00286916 1.93893e+07 2.56358e+07 1.96335e+07 285 1.95118e+07 1.05454e+07 0.00285407 1.95708e+07 50.0755 0.0353647 0.993899 0 50.3129 GTEX-13N1W-0011-R9b-SM-5MR4R C1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 549 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993925 555042 0.953203 0.994275 0.808551 22545 1 76 0.00268773 295 0 8.5538e+07 0.0464246 1.54425e+06 8.60304e+07 3.62557e+06 22570 4.26289e+07 0 0.144652 0.994275 0.803922 8.5538e+07 0.00267476 1.88124e+07 1.57713e+07 1.91394e+07 270 1.89296e+07 1.2501e+07 0.00268125 1.90535e+07 50.1631 0.01795 0.994626 0 50.4307 GTEX-13N1W-0126-SM-5K7VT 1 C1 6 pieces; about 10% internal fat; one fragment devoid of epidermis; epidermis measures 53.1um thick 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 612 700 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985701 218689 0.969623 0.987748 0.767792 24448 1 76 0.00445639 161 0 8.08118e+07 0.0300953 348792 8.18141e+07 5.41248e+06 24479 4.01708e+07 0 0.201831 0.987748 0.758385 8.08118e+07 0.00492671 1.76492e+07 1.10057e+07 1.77576e+07 162 1.7801e+07 1.36485e+07 0.00469106 1.77684e+07 49.9542 0.00426322 0.989795 0 50.153 GTEX-13N1W-0226-SM-5K7W6 1 C1 2 pieces; 10% fibrovascular component 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 615 698 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985852 171917 0.974147 0.988203 0.780866 23732 1 76 0.00437982 212 0 9.50616e+07 0.0255702 528291 9.61964e+07 6.57616e+06 23770 4.72501e+07 0 0.193281 0.988203 0.771654 9.50616e+07 0.00492895 2.07538e+07 9.40835e+06 2.09164e+07 220 2.09303e+07 1.51643e+07 0.00465373 2.0955e+07 50.0295 0.0054918 0.990555 0 50.1952 GTEX-13N1W-0326-SM-5IJDJ 1 C1 2 pieces; intimal thickening/early plaque formation 7.2 Blood Vessel Artery - Tibial 0007610 618 696 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988328 264166 0.970794 0.990833 0.781865 22667 1 76 0.00228215 169 0 8.52929e+07 0.0288671 348680 8.6082e+07 1.14334e+07 22700 4.241e+07 0 0.188929 0.990833 0.774698 8.52929e+07 0.00377118 1.83854e+07 8.29562e+06 1.84309e+07 198 1.84199e+07 1.45843e+07 0.00302478 1.86049e+07 50.2498 0.00405056 0.993338 0 50.0618 GTEX-13N1W-0426-SM-5MR46 1 C1 2 pieces; 5% to 20% internal fat 7.5 Nerve Nerve - Tibial 0001323 621 693 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991415 232774 0.961637 0.992002 0.725343 24537 1 76 0.00291121 182 0 8.50566e+07 0.038048 268414 8.57424e+07 3.31946e+06 24586 4.23685e+07 0 0.236294 0.992002 0.719542 8.50566e+07 0.00302434 1.86552e+07 8.99879e+06 1.87203e+07 188 1.86802e+07 1.2646e+07 0.00296774 1.87461e+07 50.088 0.00313047 0.992589 0 50.0871 GTEX-13N1W-0526-SM-5MR4I 1 C1 2 pieces; less than 10% of internal fat 8 Muscle Muscle - Skeletal 0011907 624 692 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.995102 235440 0.982424 0.995193 0.869784 19771 1 76 0.00257744 156 0 7.7645e+07 0.0173104 715638 7.802e+07 3.13363e+06 19783 3.87039e+07 0 0.112641 0.995193 0.865603 7.7645e+07 0.00246513 1.65042e+07 9.07541e+06 1.66264e+07 177 1.65088e+07 1.67596e+07 0.00252129 1.66342e+07 50.1893 0.0091725 0.995285 0 50.1845 GTEX-13N1W-0626-SM-5MR4U 1 C1 2 pieces; fat with 20% to 30% fibrocollagenous stroma and no evidence of ductal structures 7.1 Breast Breast - Mammary Tissue 0008367 645 672 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991084 599735 0.961055 0.991681 0.749758 22656 1 76 0.00281427 198 0 8.79699e+07 0.0386617 418995 8.87079e+07 3.48994e+06 22690 4.38225e+07 0 0.211297 0.991681 0.74352 8.79699e+07 0.00296892 1.89965e+07 2.20418e+07 1.91761e+07 207 1.91385e+07 1.3252e+07 0.00289155 1.90972e+07 49.9461 0.00472331 0.992277 0 50.2351 GTEX-13N1W-0726-SM-5MR57 1 C1 2 pieces; congestion and large alveolar spaces bounded by thin and ruptured alveolar septa consistent with emphysema 7.8 Lung Lung 0008952 650 667 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993851 152112 0.975582 0.994183 0.788597 22968 1 76 0.0028827 158 0 7.40978e+07 0.0239286 283674 7.45313e+07 2.65148e+06 22993 3.69293e+07 0 0.186985 0.994183 0.78401 7.40978e+07 0.00283814 1.64889e+07 6.36022e+06 1.65799e+07 170 1.65323e+07 1.32094e+07 0.00286043 1.65629e+07 50.0462 0.00380611 0.994515 0 50.1376 GTEX-13N1W-0826-SM-5MR5J 2 C1 2 pieces; nodular hyperplasia 6.9 Thyroid Thyroid 0002046 657 661 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99299 271006 0.968902 0.993491 0.71377 22883 1 76 0.00288128 135 0 8.06282e+07 0.0307964 267347 8.11565e+07 3.30668e+06 22929 4.01756e+07 0 0.255131 0.993491 0.709124 8.06282e+07 0.0028847 1.7791e+07 9.09174e+06 1.7861e+07 163 1.78538e+07 1.26705e+07 0.00288299 1.78376e+07 49.9773 0.00329422 0.993992 0 50.0982 GTEX-13N1W-0926-SM-5MR36 1 C1 2 pieces; small amount of internal and external fat 7.1 Heart Heart - Atrial Appendage 0006631 660 659 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993492 261665 0.977792 0.994133 0.798662 22202 1 76 0.00269277 268 0 9.19813e+07 0.0216057 1.39716e+06 9.25241e+07 3.60249e+06 22235 4.58364e+07 0 0.17913 0.994133 0.793977 9.19813e+07 0.00272067 1.97239e+07 1.26339e+07 1.96724e+07 263 1.96529e+07 1.51656e+07 0.00270671 1.98064e+07 50.1945 0.0151005 0.994775 0 49.9348 GTEX-13N1W-1026-SM-5IJC5 1 C1 2 pieces 6.2 Heart Heart - Left Ventricle 0006566 661 659 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989989 171114 0.985196 0.993085 0.85513 19621 1 76 0.0021783 263 0 7.66449e+07 0.0146867 3.10004e+06 7.71785e+07 9.23137e+06 19634 3.81163e+07 0 0.130066 0.993085 0.849217 7.66449e+07 0.00393248 1.72879e+07 2.12280e+07 1.66723e+07 324 1.65577e+07 6.71632e+06 0.00305266 1.76059e+07 51.5341 0.0401672 0.996182 0 49.0936 GTEX-13N1W-1226-SM-5K7UM 1 C1 2 pieces; small amount of fibrovascular tissue and rare lymphocytic aggregate (outlined) 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 665 656 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985404 226805 0.978344 0.987972 0.766543 23360 1 76 0.00443913 162 0 8.42133e+07 0.0213228 492384 8.52386e+07 5.47558e+06 23392 4.18316e+07 0 0.211801 0.987972 0.757323 8.42133e+07 0.0050993 1.85463e+07 9.17146e+06 1.87143e+07 179 1.87638e+07 1.31311e+07 0.00476836 1.87085e+07 49.9262 0.00577654 0.99054 0 50.2255 GTEX-13N1W-1926-SM-5IJCH 1 C1 6 pieces; well trimmed 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 679 646 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987821 216884 0.969485 0.990786 0.756991 21908 1 76 0.00232875 122 0 6.08432e+07 0.0302941 519758 6.1409e+07 7.86976e+06 21934 3.02227e+07 0 0.212494 0.990786 0.750016 6.08432e+07 0.00425634 1.31922e+07 5.73478e+06 1.3243e+07 142 1.32228e+07 8.99267e+06 0.00328966 1.33884e+07 50.3112 0.00846387 0.99375 0 50.0961 GTEX-13N1W-2026-SM-5K7YU 2 C1 6 pieces; congestion and superficial mucosal fresh hemorrhage; 4 are full thickness, 1 mucosa only, 1 muscularis 5.8 Stomach Stomach 0000945 682 644 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988887 115434 0.973052 0.991475 0.723541 21674 1 76 0.00291372 115 0 5.82085e+07 0.0266759 369493 5.8709e+07 1.04332e+07 21701 2.89414e+07 0 0.249511 0.991475 0.717373 5.82085e+07 0.00409494 1.27431e+07 5.76587e+06 1.27909e+07 124 1.28024e+07 8.45491e+06 0.00350279 1.28755e+07 50.1424 0.00629363 0.994063 0 50.0935 GTEX-13N1W-2426-SM-5IJD1 1 C1 6 pieces; hair bearing skin with one small hair follicle retention cyst (outlined); essentially well trimmed 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 692 638 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987783 150837 0.975857 0.990088 0.725116 23041 1 76 0.00247238 131 0 5.99339e+07 0.023883 295645 6.05339e+07 7.53518e+06 23072 2.98107e+07 0 0.25074 0.990088 0.717929 5.99339e+07 0.00402874 1.32909e+07 6.8396e+06 1.33548e+07 129 1.33638e+07 9.09161e+06 0.00324874 1.34152e+07 50.096 0.00488396 0.992393 0 50.1199 GTEX-13N1W-2626-SM-5IJEP 1 C1 2 pieces; spermatogenesis is present, few hyalinized tubules 6 Testis Testis 0000473 696 639 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986449 323927 0.924518 0.988174 0.708555 32909 1 76 0.00475321 138 0 7.74265e+07 0.0751267 530535 7.83531e+07 4.93738e+06 32966 3.84882e+07 0 0.215962 0.988174 0.700176 7.74265e+07 0.00496389 1.59411e+07 1.28214e+07 1.60346e+07 137 1.6091e+07 1.25786e+07 0.00485836 1.60072e+07 49.8694 0.00677108 0.989899 0 50.1463 GTEX-13N1W-3126-SM-5IFHB 1 C1 1 piece; adenohypophysis 6.4 Pituitary Pituitary 0000007 718 621 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988586 614498 0.952358 0.991232 0.763996 24308 1 76 0.00238294 160 0 7.81904e+07 0.0474489 540140 7.8882e+07 8.1927e+06 24344 3.8882e+07 0 0.188363 0.991232 0.757297 7.81904e+07 0.00394437 1.64618e+07 1.91757e+07 1.66666e+07 198 1.6661e+07 9.99876e+06 0.00316157 1.66707e+07 50.0147 0.00684745 0.993879 0 50.309 GTEX-13N2G-0001-SM-5DU64 B1 Blood Whole Blood 0013756 500 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13N2G-0001-SM-5HJQA B1 Blood Whole Blood 0013756 500 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13N2G-0001-SM-6WSC5 B1 Blood Whole Blood 0013756 500 BP-44430 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/08/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13N2G-0011-R10a-SM-4RGKC-S7 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-4RGKC-S8 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-4RGKC-hCe B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-4RGKC-hCf B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-4RGKC-humanPFCa B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-4RGKC-humanPFCb B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 DroNc-seq GTEX-13N2G-0011-R10a-SM-5MR34 B1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 498 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992933 704286 0.951227 0.993369 0.812815 25239 1 76 0.00296747 273 0 8.60436e+07 0.0484365 6.88697e+06 8.66179e+07 3.26126e+06 25263 4.28882e+07 0 0.138412 0.993369 0.807425 8.60436e+07 0.00296318 1.88297e+07 2.48881e+07 1.89659e+07 269 1.88886e+07 1.19015e+07 0.00296533 1.89582e+07 50.092 0.0795098 0.993805 0 50.1802 GTEX-13N2G-0011-R10a-SM-AHZ6N B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 ChIP-Seq GTEX-13N2G-0011-R11a-SM-5MR3F B1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 498 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992221 362979 0.947899 0.992741 0.757551 23388 1 76 0.0029339 155 0 7.78807e+07 0.0516445 1.22609e+06 7.84502e+07 3.16685e+06 23415 3.87969e+07 0 0.190348 0.992741 0.752052 7.78807e+07 0.00295402 1.68527e+07 1.18561e+07 1.68779e+07 195 1.68648e+07 1.03851e+07 0.00294396 1.69091e+07 50.0655 0.0156288 0.99326 0 50.0374 GTEX-13N2G-0011-R1b-SM-4RGJU-hHP1 B1, A1 Brain Brain - Hippocampus 0001954 498 DroNc-seq GTEX-13N2G-0011-R1b-SM-4RGJU-hHP2 B1, A1 Brain Brain - Hippocampus 0001954 498 DroNc-seq GTEX-13N2G-0011-R1b-SM-5MR3G B1, A1 7.3 Brain Brain - Hippocampus 0001954 498 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993483 801717 0.948247 0.993943 0.817823 24124 1 76 0.00286794 272 0 8.97182e+07 0.0514367 5.21398e+06 9.02649e+07 3.48319e+06 24147 4.47257e+07 0 0.130424 0.993943 0.812869 8.97182e+07 0.00290151 1.94432e+07 3.08106e+07 1.96372e+07 287 1.95444e+07 1.03318e+07 0.00288472 1.95913e+07 50.06 0.0577631 0.994403 0 50.2482 GTEX-13N2G-0011-R2a-SM-5MR4Q B1, A1 5.8 Brain Brain - Substantia nigra 0002038 498 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.994021 406806 0.962579 0.994561 0.830498 23315 1 76 0.00290247 272 0 7.94656e+07 0.0371457 5.17874e+06 7.99002e+07 2.83098e+06 23334 3.96134e+07 0 0.132081 0.994561 0.825981 7.94656e+07 0.00293871 1.74576e+07 1.70469e+07 1.76664e+07 266 1.75438e+07 9.37305e+06 0.00292058 1.76289e+07 50.121 0.0648151 0.995102 0 50.2973 GTEX-13N2G-0011-R3b-SM-5MR5G B1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 498 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991664 592351 0.956788 0.992084 0.832927 24365 1 76 0.00310322 271 0 8.79173e+07 0.0429166 9.67605e+06 8.86188e+07 3.24701e+06 24394 4.38186e+07 0 0.123861 0.992084 0.826334 8.79173e+07 0.00310341 1.92682e+07 2.23098e+07 1.95145e+07 281 1.93221e+07 1.10115e+07 0.00310331 1.95066e+07 50.2376 0.109187 0.992503 0 50.3175 GTEX-13N2G-0011-R4b-SM-5MR54 B1, A1 6.3 Brain Brain - Amygdala 0001876 498 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993077 601978 0.955657 0.993481 0.833173 24471 1 76 0.00290994 270 0 8.38115e+07 0.0440513 4.82391e+06 8.43615e+07 3.17918e+06 24490 4.17515e+07 0 0.122484 0.993481 0.827741 8.38115e+07 0.00300129 1.82888e+07 2.00008e+07 1.84509e+07 292 1.8274e+07 1.00512e+07 0.0029556 1.85104e+07 50.3214 0.0571814 0.993884 0 50.2206 GTEX-13N2G-0011-R5a-SM-5MR33 B1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 498 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 EXCLUDE 0.993359 501950 0.963997 0.993775 0.815289 25431 1 76 0.00284055 276 0 9.59584e+07 0.0356691 5.08952e+06 9.65594e+07 3.90374e+06 25466 4.7834e+07 0 0.148708 0.993775 0.810214 9.59584e+07 0.00284791 2.12776e+07 1.87704e+07 2.13611e+07 271 2.13252e+07 1.55283e+07 0.00284423 2.13604e+07 50.0412 0.0527087 0.994192 0 50.098 GTEX-13N2G-0011-R6b-SM-5MR3P B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 498 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991933 514804 0.954531 0.992505 0.816742 24383 1 76 0.00314607 269 0 8.58104e+07 0.0452021 7.14884e+06 8.64584e+07 3.35945e+06 24405 4.27737e+07 0 0.137788 0.992505 0.810621 8.58104e+07 0.00313375 1.87393e+07 2.14626e+07 1.87746e+07 260 1.87228e+07 1.01055e+07 0.00313991 1.88472e+07 50.1655 0.0826853 0.993077 0 50.0471 GTEX-13N2G-0011-R7a-SM-5MR42 B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 498 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99314 547460 0.963737 0.993664 0.823625 23809 1 76 0.0029308 272 0 8.50383e+07 0.0359851 7.21116e+06 8.55806e+07 3.35933e+06 23835 4.23788e+07 0 0.140113 0.993664 0.818406 8.50383e+07 0.00296227 1.8832e+07 1.98231e+07 1.90527e+07 264 1.89255e+07 1.18327e+07 0.00294652 1.90085e+07 50.1094 0.0842617 0.994188 0 50.2912 GTEX-13N2G-0011-R9b-SM-5MR4E B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 498 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993141 430550 0.957319 0.993717 0.799827 24193 1 76 0.00273511 293 0 9.06192e+07 0.0422812 1.60449e+06 9.11921e+07 3.36454e+06 24220 4.51731e+07 0 0.157492 0.993717 0.794802 9.06192e+07 0.00277199 2.00643e+07 1.27828e+07 2.03246e+07 272 2.01674e+07 1.35191e+07 0.00275354 2.02724e+07 50.1298 0.0175946 0.994294 0 50.3222 GTEX-13N2G-0126-SM-5N9DV 1 B1 2 pieces; spermatogenesis present 5.7 Testis Testis 0000473 512 966 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.991705 297300 0.927403 0.992481 0.711985 33350 1 76 0.00292282 175 0 8.71795e+07 0.0723027 993871 8.78399e+07 4.24616e+06 33418 4.34223e+07 0 0.215418 0.992481 0.706632 8.71795e+07 0.00338963 1.81219e+07 1.14035e+07 1.81726e+07 181 1.81624e+07 1.28351e+07 0.00315604 1.81948e+07 50.0447 0.0113146 0.993257 0 50.0698 GTEX-13N2G-0226-SM-5K7VF 1 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 515 963 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985792 173971 0.972962 0.988154 0.758997 25294 1 76 0.00453098 181 0 8.82817e+07 0.026766 615515 8.934e+07 5.75476e+06 25332 4.38689e+07 0 0.213965 0.988154 0.750005 8.82817e+07 0.00509532 1.9331e+07 8.82881e+06 1.94382e+07 183 1.94804e+07 1.38501e+07 0.00481248 1.94905e+07 50.013 0.00688958 0.990516 0 50.1383 GTEX-13N2G-0526-SM-5MR5L 1 B1 6 pieces; atherosclerosis with dissection of aortic wall 6.1 Blood Vessel Artery - Aorta 0001496 528 950 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992319 175799 0.980662 0.992852 0.835678 21518 1 76 0.00268957 204 0 8.59379e+07 0.0189308 243518 8.65566e+07 3.28886e+06 21536 4.28151e+07 0 0.144984 0.992852 0.829704 8.59379e+07 0.0027933 1.88461e+07 9.62553e+06 1.89265e+07 205 1.88667e+07 1.77776e+07 0.00274141 1.8958e+07 50.1206 0.00281339 0.993384 0 50.1064 GTEX-13N2G-0726-SM-5MR38 1 B1 2 pieces: mild patchy fibrosis with follicular atrophy 5.9 Thyroid Thyroid 0002046 530 948 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991988 193682 0.963718 0.992399 0.741533 25196 1 76 0.00297516 208 0 9.4952e+07 0.03597 427112 9.56793e+07 3.9523e+06 25233 4.73172e+07 0 0.222186 0.992399 0.735896 9.4952e+07 0.0029967 2.07327e+07 1.00538e+07 2.08308e+07 241 2.07878e+07 1.4691e+07 0.00298592 2.08148e+07 50.0324 0.004464 0.992809 0 50.118 GTEX-13N2G-0826-SM-5IJE6 1 B1 2 pieces; congestion, atelectasis, hemosiderin-laden macrophages and some fibrosis 8 Lung Lung 0008952 533 945 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987982 201938 0.973314 0.989554 0.762634 25032 1 76 0.00492946 207 0 1.02299e+08 0.0260756 443022 1.03379e+08 6.48169e+06 25073 5.08555e+07 0 0.21068 0.989554 0.754668 1.02299e+08 0.00504824 2.27128e+07 9.67944e+06 2.29339e+07 253 2.29282e+07 1.66263e+07 0.00498875 2.28741e+07 49.9409 0.00428543 0.991127 0 50.2422 GTEX-13N2G-0826-SM-CYKVY 1 B1 2 pieces; congestion, atelectasis, hemosiderin-laden macrophages and some fibrosis 8 Lung Lung 0008952 533 945 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13N2G-0926-SM-5IFGJ 1 B1 2 pieces; congestion and accentuation of portal triads with fibrosis and mild lymphocytic infiltrate 6 Liver Liver 0001114 534 944 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988304 308216 0.968364 0.991979 0.81527 21188 1 76 0.00259012 148 0 6.6019e+07 0.0313518 1.21086e+06 6.65528e+07 7.48108e+06 21206 3.28079e+07 0 0.153094 0.991979 0.808731 6.6019e+07 0.00417084 1.43576e+07 1.46615e+07 1.45219e+07 175 1.44978e+07 7.86911e+06 0.00337755 1.45993e+07 50.1743 0.018194 0.995654 0 50.2845 GTEX-13N2G-1226-SM-5IJCI 1 B1 6 pieces; congestion; missing and attenuation of squamous epithelium in places 6 Esophagus Esophagus - Mucosa 0006920 547 931 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 EXCLUDE 0.9891 222427 0.966005 0.991895 0.77653 24163 1 76 0.00236567 149 0 7.21873e+07 0.0337651 432662 7.27772e+07 9.79297e+06 24191 3.58677e+07 0 0.189475 0.991895 0.770236 7.21873e+07 0.00413777 1.57672e+07 1.00915e+07 1.5878e+07 170 1.58259e+07 1.05462e+07 0.00324922 1.60178e+07 50.3013 0.00594502 0.99469 0 50.1751 GTEX-13N2G-1826-SM-5KM1I 1 B1 2 pieces; nodular hyperplasia; sloughed glandular epithelium 6.2 Prostate Prostate 0002367 563 915 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.9853 180628 0.961817 0.987797 0.769068 24383 1 76 0.00408478 130 0 6.56281e+07 0.0379456 834073 6.64389e+07 3.24599e+06 24416 3.25906e+07 0 0.192748 0.987797 0.759684 6.56281e+07 0.00543645 1.43523e+07 8.78733e+06 1.44355e+07 149 1.44528e+07 8.76674e+06 0.0047589 1.44956e+07 50.0739 0.012554 0.990294 0 50.1445 GTEX-13N2G-1926-SM-5J1O3 1 B1 3 pieces; 10% fibrovascular component 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 565 913 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986259 206808 0.976104 0.988201 0.810658 22947 1 76 0.00418882 159 0 7.77447e+07 0.0236019 473978 7.86729e+07 4.36765e+06 22965 3.8626e+07 0 0.165445 0.988201 0.801094 7.77447e+07 0.00511991 1.71523e+07 8.21778e+06 1.72078e+07 179 1.72461e+07 1.21336e+07 0.00465345 1.72668e+07 50.0299 0.00602466 0.990144 0 50.0807 GTEX-13N2G-2226-SM-5IJCU 1 B1 6 pieces; focal attachment of mucosa (not target) 6.5 Colon Colon - Sigmoid 0001159 577 901 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98811 211993 0.965263 0.991288 0.784925 22062 1 76 0.00234646 123 0 5.55748e+07 0.0345462 550870 5.60632e+07 7.14972e+06 22081 2.76056e+07 0 0.180338 0.991288 0.778087 5.55748e+07 0.00421379 1.18568e+07 5.82749e+06 1.1924e+07 133 1.18998e+07 8.31169e+06 0.00327713 1.20504e+07 50.3144 0.00982588 0.994466 0 50.1413 GTEX-13N2G-2326-SM-5J1ON 1 B1 2 pieces; 10% external fat 8.2 Muscle Muscle - Skeletal 0011907 579 899 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990683 364471 0.985805 0.99239 0.885309 21464 1 76 0.00382935 383 0 1.49639e+08 0.0139571 2.08822e+06 1.50787e+08 7.93267e+06 21478 7.45072e+07 0 0.100496 0.99239 0.878572 1.49639e+08 0.00439122 3.26495e+07 2.17702e+07 3.28496e+07 353 3.28609e+07 3.26975e+07 0.0041098 3.28824e+07 50.0164 0.0138488 0.994098 0 50.1528 GTEX-13N2G-2626-SM-5J1OT 1 B1 6 pieces; 10% to 30% of internal/external fat; 71 um thick epidermis 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 589 889 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987255 243334 0.971361 0.989351 0.777663 24148 1 76 0.00405398 194 0 8.40466e+07 0.0284092 414104 8.49512e+07 4.77831e+06 24174 4.17623e+07 0 0.193698 0.989351 0.769382 8.40466e+07 0.00498687 1.83017e+07 7.96704e+06 1.83824e+07 177 1.84218e+07 1.4239e+07 0.00451944 1.84354e+07 50.0185 0.00487461 0.991448 0 50.11 GTEX-13N2G-2726-SM-5J1MG 1 B1 2 pieces; 5% and 15% fibrovascular component 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 589 889 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.983894 274828 0.972673 0.985896 0.783015 24253 1 76 0.00417441 210 0 9.70645e+07 0.0270227 1.09934e+06 9.84531e+07 5.77511e+06 24292 4.81717e+07 0 0.189658 0.985896 0.771972 9.70645e+07 0.00524096 2.12975e+07 9.37978e+06 2.1403e+07 228 2.14008e+07 1.48423e+07 0.0047066 2.14902e+07 50.1042 0.0111662 0.987899 0 50.1235 GTEX-13N2G-2926-SM-5IJEE 1 B1 1 piece; adenohypophysis and attached small fragment of neurohypophysis 6.3 Pituitary Pituitary 0000007 627 851 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986331 348591 0.957086 0.988003 0.750144 25983 1 76 0.00473125 206 0 9.85491e+07 0.0426606 418130 9.97458e+07 6.3412e+06 26033 4.90018e+07 0 0.206941 0.988003 0.741145 9.85491e+07 0.00488035 2.01365e+07 1.61546e+07 2.0326e+07 210 2.03708e+07 1.62005e+07 0.00480568 2.02474e+07 49.8481 0.00419196 0.989674 0 50.2341 GTEX-13N2G-3026-SM-CYKVX 1 B1 2 pieces; one piece with attached meninges and small bone fragments 5.6 Brain Brain - Cortex 0001870 629 849 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 RIP-Seq GTEX-13N2G-3126-SM-5IJGL 1 B1 2 pieces; Purkinje cells present 6.5 Brain Brain - Cerebellum 0002037 633 845 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986458 663342 0.936354 0.988117 0.719562 25533 1 76 0.0050214 270 0 1.09217e+08 0.0633277 2.20419e+06 1.10531e+08 7.23084e+06 25572 5.42945e+07 0 0.216792 0.988117 0.711011 1.09217e+08 0.00518622 2.32616e+07 3.50544e+07 2.34659e+07 265 2.35069e+07 1.20713e+07 0.00510367 2.34046e+07 49.891 0.0199419 0.989775 0 50.2186 GTEX-13NYB-0004-SM-5DU4R B1 Blood Whole Blood 0013756 990 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NYB-0004-SM-5HJQP B1 Blood Whole Blood 0013756 990 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13NYB-0004-SM-6WSC1 B1 Blood Whole Blood 0013756 990 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NYB-0011-R10a-SM-5KM43 B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 983 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.99002 796166 0.946259 0.991854 0.809385 23361 1 76 0.00409521 200 0 7.59964e+07 0.0533876 4.12299e+06 7.66205e+07 5.1038e+06 23374 3.78197e+07 0 0.136874 0.991854 0.802792 7.59964e+07 0.00486524 1.60457e+07 2.98925e+07 1.63409e+07 208 1.62892e+07 8.08146e+06 0.00447952 1.62345e+07 49.9158 0.0538106 0.993689 0 50.4558 GTEX-13NYB-0011-R11a-SM-5KM3Q B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 983 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987182 462923 0.941178 0.988974 0.718415 23661 1 76 0.00378229 134 0 7.59506e+07 0.0583336 1.18907e+06 7.67974e+07 5.11635e+06 23695 3.7772e+07 0 0.222763 0.988974 0.710494 7.59506e+07 0.00447078 1.62532e+07 1.64052e+07 1.64026e+07 159 1.64196e+07 9.70407e+06 0.00412591 1.63638e+07 49.9149 0.0154832 0.990765 0 50.2288 GTEX-13NYB-0011-R1b-SM-5KM4F B1, A1 6.3 Brain Brain - Hippocampus 0001954 983 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988973 669612 0.946411 0.991158 0.828176 21955 1 76 0.00418759 141 0 6.16025e+07 0.0533189 5.55632e+06 6.2152e+07 3.86557e+06 21963 3.06488e+07 0 0.118235 0.991158 0.820853 6.16025e+07 0.00509762 1.3119e+07 2.41515e+07 1.3402e+07 155 1.33318e+07 6.34117e+06 0.0046416 1.33236e+07 49.9845 0.0893989 0.993342 0 50.5335 GTEX-13NYB-0011-R2a-SM-5MR3C B1, A1 7.7 Brain Brain - Substantia nigra 0002038 983 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99341 357472 0.962566 0.993876 0.825901 23269 1 76 0.00319485 312 0 1.0497e+08 0.0370518 3.7773e+06 1.05617e+08 4.02017e+06 23292 5.23304e+07 0 0.136665 0.993876 0.820843 1.0497e+08 0.00319472 2.31866e+07 1.32713e+07 2.35763e+07 303 2.3328e+07 1.60614e+07 0.00319479 2.34787e+07 50.161 0.0357642 0.994342 0 50.4167 GTEX-13NYB-0011-R3b-SM-A9SM4 B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 983 BP-65139 RNA isolation_PAXgene Tissue miRNA 07/08/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989717 308661 0.970886 0.991375 0.859797 23173 1 76 0.00772429 154 0 8.13255e+07 0.0288299 7.67634e+06 8.2033e+07 1.50367e+07 23189 4.04868e+07 0 0.111089 0.991375 0.852381 8.13255e+07 0.00884622 1.75878e+07 1.47608e+07 1.81299e+07 198 1.80479e+07 8.18744e+06 0.00828432 1.77757e+07 49.6201 0.0935762 0.993032 0 50.7588 GTEX-13NYB-0011-R4b-SM-9QEGJ B1, A1 5.8 Brain Brain - Amygdala 0001876 983 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990516 363049 0.964884 0.993483 0.862769 21770 1 76 0.00299389 200 0 7.22857e+07 0.0348615 6.8377e+06 7.27599e+07 3.65115e+06 21781 3.59639e+07 0 0.102115 0.993483 0.857146 7.22857e+07 0.00506515 1.56443e+07 1.63852e+07 1.59304e+07 220 1.59231e+07 7.49344e+06 0.00402643 1.58431e+07 49.8741 0.0939763 0.99645 0 50.453 GTEX-13NYB-0011-R5a-SM-5MR45 B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 983 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992717 766187 0.94696 0.993408 0.81872 23068 1 76 0.00374217 269 0 8.86118e+07 0.0528149 6.39939e+06 8.91998e+07 3.61112e+06 23086 4.41702e+07 0 0.12824 0.993408 0.813323 8.86118e+07 0.00387952 1.87429e+07 3.2287e+07 1.93231e+07 292 1.91265e+07 8.72231e+06 0.0038108 1.90063e+07 49.8424 0.0717422 0.994099 0 50.762 GTEX-13NYB-0011-R6b-SM-5MR51 B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 983 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992101 878465 0.945547 0.99268 0.811245 23848 1 76 0.00353979 271 0 9.13019e+07 0.0540692 6.0114e+06 9.19752e+07 3.5791e+06 23868 4.54982e+07 0 0.134302 0.99268 0.805306 9.13019e+07 0.00359727 1.95247e+07 3.19137e+07 1.97452e+07 275 1.96559e+07 1.08183e+07 0.00356852 1.96854e+07 50.0375 0.0653589 0.993259 0 50.2807 GTEX-13NYB-0011-R7a-SM-5MR5D B1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 983 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99379 736999 0.951087 0.994328 0.82243 22621 1 76 0.00390958 271 0 8.3079e+07 0.0486789 7.13842e+06 8.35529e+07 3.0426e+06 22639 4.13915e+07 0 0.128657 0.994328 0.817765 8.3079e+07 0.00406478 1.77634e+07 2.96464e+07 1.80289e+07 257 1.78449e+07 7.54874e+06 0.00398714 1.80174e+07 50.2405 0.0854358 0.994865 0 50.3709 GTEX-13NYB-0011-R8a-SM-5KM4R B1, A1 7 Brain Brain - Hypothalamus 0001898 983 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989961 513783 0.957794 0.991989 0.832816 23797 1 76 0.00385241 203 0 7.80683e+07 0.0418456 3.60789e+06 7.86988e+07 5.10157e+06 23816 3.88416e+07 0 0.124979 0.991989 0.826144 7.80683e+07 0.0046136 1.69133e+07 1.66608e+07 1.72217e+07 226 1.71663e+07 9.83272e+06 0.00423223 1.71159e+07 49.9264 0.0458443 0.994016 0 50.4517 GTEX-13NYB-0011-R9b-SM-5MR5P B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 983 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991879 520712 0.958035 0.9926 0.825856 22961 1 76 0.00372086 298 0 8.77288e+07 0.0416786 6.06985e+06 8.83828e+07 3.36014e+06 22977 4.36821e+07 0 0.132179 0.9926 0.819744 8.77288e+07 0.00391295 1.90682e+07 1.71124e+07 1.95418e+07 267 1.91688e+07 9.94382e+06 0.00381684 1.95059e+07 50.4358 0.0686768 0.993321 0 50.6132 GTEX-13NYB-0126-SM-5J1MD 0 B1 6 pieces, squamous epithelium is ~50-60 microns, minimal dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 997 1027 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98767 182691 0.97833 0.989412 0.813908 23501 1 76 0.00438934 184 0 8.81949e+07 0.0214213 338119 8.91387e+07 5.10896e+06 23523 4.38231e+07 0 0.164422 0.989412 0.80529 8.81949e+07 0.00520747 1.93821e+07 1.0028e+07 1.94374e+07 186 1.94372e+07 1.65271e+07 0.00479768 1.95379e+07 50.1292 0.00379318 0.991154 0 50.0712 GTEX-13NYB-0226-SM-5N9G4 1 B1 2 pieces, moderate interstitial fibrosis 5.7 Heart Heart - Left Ventricle 0006566 1014 1010 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987948 200151 0.988043 0.989641 0.825232 17741 1 76 0.00688888 263 0 8.87454e+07 0.0119014 9.16913e+06 8.96744e+07 4.51657e+06 17745 4.41476e+07 0 0.162811 0.989641 0.816682 8.87454e+07 0.0070567 1.8354e+07 5.15037e+07 1.88134e+07 272 1.8602e+07 2.91414e+06 0.00697265 1.87334e+07 50.1759 0.102249 0.991333 0 50.6181 GTEX-13NYB-0326-SM-5IJDP 1 B1 2 pieces, no abnormalities 7 Heart Heart - Atrial Appendage 0006631 1016 1008 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989818 178767 0.984186 0.992533 0.802481 21771 1 76 0.00345595 158 0 7.79592e+07 0.0155459 2.89533e+06 7.85457e+07 1.02577e+07 21792 3.87754e+07 0 0.181705 0.992533 0.796489 7.79592e+07 0.00507766 1.72439e+07 1.29207e+07 1.69735e+07 185 1.70023e+07 1.0212e+07 0.00426458 1.74106e+07 50.5932 0.0368617 0.995248 0 49.605 GTEX-13NYB-0426-SM-5IJDD 1 B1 6 pieces, minimal atherosis 6.3 Blood Vessel Artery - Aorta 0001496 1013 1011 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.985829 162568 0.969014 0.989436 0.737188 21968 1 76 0.00269349 120 0 5.81634e+07 0.0305791 83447 5.87844e+07 8.09097e+06 21994 2.88517e+07 0 0.231826 0.989436 0.7294 5.81634e+07 0.00462075 1.25856e+07 5.26128e+06 1.26307e+07 126 1.26656e+07 9.07445e+06 0.00365361 1.2751e+07 50.1681 0.00141954 0.993042 0 50.0894 GTEX-13NYB-0626-SM-5MR47 1 B1 2 pieces, mild congestion 6.5 Lung Lung 0008952 1016 1008 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.988814 248924 0.972842 0.989561 0.777755 23922 1 76 0.0034045 208 0 9.12114e+07 0.0267098 457224 9.21737e+07 3.77215e+06 23959 4.54104e+07 0 0.195087 0.989561 0.769636 9.12114e+07 0.0036184 2.00223e+07 8.89994e+06 2.01822e+07 218 2.01138e+07 1.40032e+07 0.00351137 2.01591e+07 50.0563 0.00496046 0.990307 0 50.199 GTEX-13NYB-0726-SM-5MR4J 2 B1 2 pieces, no abnormalities 6.8 Thyroid Thyroid 0002046 1019 1005 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991394 288216 0.969717 0.991698 0.819997 23986 1 76 0.00339508 201 0 8.65172e+07 0.0288187 315059 8.72415e+07 3.48348e+06 24014 4.30407e+07 0 0.14972 0.991698 0.813189 8.65172e+07 0.00346681 1.90608e+07 1.44046e+07 1.9124e+07 203 1.9098e+07 1.58827e+07 0.00343093 1.91234e+07 50.0331 0.00361135 0.992002 0 50.0828 GTEX-13NYB-0826-SM-5MR4V 1 B1 6 pieces, all muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 1027 997 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992269 264894 0.969482 0.992903 0.813344 23130 1 76 0.00321909 192 0 8.20136e+07 0.0303048 1.54475e+06 8.25999e+07 3.02434e+06 23157 4.08397e+07 0 0.156138 0.992903 0.807571 8.20136e+07 0.00338172 1.74619e+07 8.23324e+06 1.76182e+07 203 1.75126e+07 1.22538e+07 0.00330035 1.76242e+07 50.1588 0.0187017 0.993537 0 50.2228 GTEX-13NYB-0926-SM-5IFFA 1 B1 6 pieces, squamous mucosa is ~0.2mm, ~10% thickness; submucosal mucus glands present, rep. encircled 8 Esophagus Esophagus - Mucosa 0006920 1026 998 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4813,LCSET-5125 03/08/2014 TruSeq.v1 RNASEQ 0.991197 221354 0.982583 0.992937 0.776092 21551 1 76 0.00259666 211 0 9.08538e+07 0.017111 653442 9.15001e+07 5.49942e+06 21569 4.52432e+07 0 0.20649 0.992937 0.770611 9.08538e+07 0.00355615 2.07016e+07 1.37386e+07 2.08626e+07 220 2.08801e+07 1.66205e+07 0.00307557 2.08406e+07 49.9526 0.00714144 0.994677 0 50.1937 GTEX-13NYB-1026-SM-5IFH3 1 B1 2 pieces, diffuse macrovesicular steatosis involves >80% parenchyma 6.1 Liver Liver 0001114 1034 990 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988052 300217 0.969788 0.9915 0.819079 21396 1 76 0.00340277 149 0 7.00467e+07 0.0300878 2.36524e+06 7.06472e+07 8.16706e+06 21410 3.4794e+07 0 0.150709 0.9915 0.812116 7.00467e+07 0.00509083 1.51629e+07 1.24409e+07 1.52421e+07 177 1.52139e+07 8.24771e+06 0.00424387 1.54202e+07 50.3367 0.0334795 0.994947 0 50.1303 GTEX-13NYB-1326-SM-5K7Y1 1 B1 6 pieces, few foci of admixed fat, rep delineated 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1042 982 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.987779 135233 0.974608 0.990653 0.79041 21914 1 76 0.00317287 118 0 5.37789e+07 0.025144 761437 5.42863e+07 9.7487e+06 21927 2.67275e+07 0 0.184198 0.990653 0.783022 5.37789e+07 0.00457599 1.16695e+07 5.24444e+06 1.17017e+07 128 1.16912e+07 8.18513e+06 0.00387239 1.18265e+07 50.2876 0.0140263 0.993526 0 50.069 GTEX-13NYB-1726-SM-5N9G2 2 B1 6 pieces, all contain glomeruli, tubules badly autolyzed 5.7 Kidney Kidney - Cortex 0001225 1056 968 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987299 805465 0.958249 0.988879 0.838275 24045 1 76 0.0043807 277 0 9.99855e+07 0.0414078 8.52925e+06 1.0111e+08 5.51999e+06 24065 4.96584e+07 0 0.119974 0.988879 0.828953 9.99855e+07 0.00465376 2.18192e+07 3.01381e+07 2.21661e+07 266 2.21181e+07 1.69062e+07 0.00451701 2.20479e+07 49.9205 0.0843562 0.990458 0 50.3943 GTEX-13NYB-1826-SM-5J1N3 3 B1 6 pieces, ~10% tissue is lymphoid aggregates; rest autolyzed mucosa/muscularis/fat. Best reserved for TMA/ LCM 5.8 Small Intestine Small Intestine - Terminal Ileum 0001211 1063 961 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984617 228360 0.971533 0.986332 0.805021 23740 1 76 0.00447582 167 0 8.03273e+07 0.0282429 1.05322e+06 8.14404e+07 5.10488e+06 23762 3.98423e+07 0 0.166511 0.986332 0.794018 8.03273e+07 0.00546709 1.74186e+07 7.72323e+06 1.75491e+07 186 1.75129e+07 1.175e+07 0.00497059 1.7593e+07 50.1142 0.0129324 0.988048 0 50.1866 GTEX-13NYB-2226-SM-5MR58 3 B1 2 pieces, tubular cells badly autolyzed, sloughing into lumen 6.4 Testis Testis 0000473 1075 949 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991883 292174 0.934913 0.992469 0.719878 33534 1 76 0.00324812 173 0 8.91216e+07 0.0647818 995534 8.97979e+07 3.56626e+06 33602 4.44159e+07 0 0.215034 0.992469 0.714457 8.91216e+07 0.00330303 1.87781e+07 1.33642e+07 1.88767e+07 181 1.88738e+07 1.38903e+07 0.00327556 1.88343e+07 49.9476 0.0110864 0.993055 0 50.1309 GTEX-13NYB-2426-SM-5IFF4 1 B1 2 pieces; ~50% total tissue is glandular; rest is stroma (one piece is ~90% target, good specimen) 7.5 Salivary Gland Minor Salivary Gland 0006330 1088 936 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.981462 403526 0.96843 0.985755 0.777151 23627 1 76 0.00351923 181 0 7.90888e+07 0.0287864 292219 8.02317e+07 9.60444e+06 23654 3.9132e+07 0 0.191278 0.985755 0.766081 7.90888e+07 0.00530231 1.78719e+07 2.31757e+07 1.7915e+07 179 1.80245e+07 1.20452e+07 0.00440689 1.81017e+07 50.1069 0.00364219 0.990049 0 50.0602 GTEX-13NYB-2526-SM-5K7Z6 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1153 871 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.987499 335277 0.967735 0.990639 0.781363 22020 1 76 0.00313109 151 0 6.37884e+07 0.032034 425543 6.43912e+07 1.17942e+07 22040 3.17028e+07 0 0.186372 0.990639 0.774049 6.37884e+07 0.00479856 1.37809e+07 1.35226e+07 1.37803e+07 147 1.37947e+07 1.03262e+07 0.00396218 1.3968e+07 50.312 0.00660872 0.99378 0 49.9989 GTEX-13NYB-2626-SM-9YFMI 0 B1 2 pieces, ~20% fascia/fibrous tissue, delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1154 870 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993505 227118 0.977499 0.994746 0.818626 22444 1 76 0.00279635 165 0 7.56262e+07 0.0221654 433612 7.60256e+07 2.67607e+06 22470 3.76733e+07 0 0.158873 0.994746 0.814325 7.56262e+07 0.0039295 1.65121e+07 6.35805e+06 1.66766e+07 174 1.66644e+07 1.40043e+07 0.00336222 1.662e+07 49.9334 0.0057035 0.995987 0 50.2479 GTEX-13NYB-2726-SM-5J2MT 0 B1 2 pieces <5% interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 1178 846 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985693 214439 0.981924 0.989682 0.864557 20525 1 76 0.00455261 128 0 8.11037e+07 0.0177976 903242 8.19492e+07 4.33939e+06 20539 4.02645e+07 0 0.117367 0.989682 0.855636 8.11037e+07 0.00636189 1.74589e+07 7.59254e+06 1.75172e+07 149 1.75972e+07 1.77302e+07 0.0054536 1.76766e+07 50.1125 0.011022 0.993671 0 50.0834 GTEX-13NYB-2926-SM-5K7VH 0 B1 2 pieces, no fat, excellent clean specimens 7 Blood Vessel Artery - Tibial 0007610 1158 866 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985877 173476 0.975399 0.98815 0.833338 21341 1 76 0.00457541 157 0 8.17632e+07 0.0242192 300646 8.27437e+07 5.41815e+06 21357 4.06402e+07 0 0.142061 0.98815 0.823464 8.17632e+07 0.00514828 1.73785e+07 7.74782e+06 1.75831e+07 166 1.75795e+07 1.64547e+07 0.00486119 1.75633e+07 49.9769 0.00363346 0.990424 0 50.2925 GTEX-13NYB-3026-SM-5IJD7 1 B1 2 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 1231 793 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989779 295740 0.965893 0.992869 0.832182 23765 1 76 0.00312311 202 0 8.2203e+07 0.0338017 3.42394e+06 8.27934e+07 1.04346e+07 23781 4.08636e+07 0 0.133711 0.992869 0.826248 8.2203e+07 0.00494722 1.80264e+07 1.29327e+07 1.79137e+07 242 1.78511e+07 9.57711e+06 0.00403233 1.83239e+07 50.6536 0.0413552 0.99596 0 49.8432 GTEX-13NYB-3226-SM-5J2ND 1 B1 2 pieces, cerebellum, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 1233 791 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982986 692432 0.923194 0.986679 0.703883 23392 1 76 0.00485351 114 0 7.47269e+07 0.0763724 1.06357e+06 7.57357e+07 3.78159e+06 23416 3.70852e+07 0 0.219311 0.986679 0.694507 7.47269e+07 0.00654589 1.56154e+07 3.38419e+07 1.58389e+07 138 1.59268e+07 9.24508e+06 0.00569653 1.57865e+07 49.7788 0.0140432 0.990372 0 50.3553 GTEX-13NYC-0004-SM-5DU65 B1 Blood Whole Blood 0013756 972 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NYC-0004-SM-5HJQD B1 Blood Whole Blood 0013756 972 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13NYC-0004-SM-6WSB9 B1 Blood Whole Blood 0013756 972 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NYC-0126-SM-5L3F4 1 B1 6 pieces; 10% internal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 965 708 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986501 190499 0.978335 0.990873 0.776118 21771 1 76 0.00313395 137 0 6.08121e+07 0.021383 601207 6.13723e+07 6.41846e+06 21788 3.01913e+07 0 0.202217 0.990873 0.769034 6.08121e+07 0.00444661 1.35076e+07 6.76731e+06 1.34962e+07 140 1.35592e+07 9.80281e+06 0.00378738 1.36958e+07 50.2506 0.00979607 0.995244 0 49.9788 GTEX-13NYC-0326-SM-5K7WP 1 B1 6 pieces; 10% to 20% internal fat; solar elastosis 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 970 703 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4819 03/16/2014 TruSeq.v1 EXCLUDE 0.989801 119524 0.976829 0.99246 0.806335 23292 1 76 0.00262497 142 0 6.50321e+07 0.0229007 391311 6.55262e+07 1.11388e+07 23308 3.23523e+07 0 0.170494 0.99246 0.800255 6.50321e+07 0.00399207 1.43565e+07 7.00916e+06 1.44135e+07 153 1.44164e+07 1.13986e+07 0.00330669 1.4523e+07 50.1842 0.00597183 0.995118 0 50.099 GTEX-13NYC-0326-SM-E9J4S 1 B1 6 pieces; 10% to 20% internal fat; solar elastosis 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 970 703 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987131 571048 0.970046 0.988177 0.770574 22649 1 76 0.00187682 183 0 7.53289e+07 0.0296787 369248 7.62302e+07 3.9436e+06 22681 3.75178e+07 0 0.199472 0.988177 0.761464 7.53289e+07 0.00271739 1.64235e+07 1.12354e+07 1.65316e+07 174 1.65102e+07 1.29738e+07 0.00229666 1.65293e+07 50.0288 0.00484385 0.989223 0 50.1641 GTEX-13NYC-0626-SM-5K7U8 1 B1 2 pieces; insignificant amount of internal/external fat 7 Nerve Nerve - Tibial 0001323 1014 659 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984626 296323 0.970698 0.987255 0.762615 23447 1 76 0.00454509 162 0 7.80175e+07 0.0290259 248238 7.90246e+07 5.30118e+06 23478 3.87102e+07 0 0.208083 0.987255 0.752896 7.80175e+07 0.00549728 1.72336e+07 7.63769e+06 1.72836e+07 161 1.73211e+07 1.2761e+07 0.00501992 1.73998e+07 50.1135 0.00314127 0.989884 0 50.0725 GTEX-13NYC-0726-SM-5J2NQ 1 B1 2 pieces; up to 30% internal fat, some atrophic fibers 7.2 Muscle Muscle - Skeletal 0011907 985 688 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.98285 280566 0.970392 0.986908 0.792307 21999 1 76 0.00411551 206 0 9.30831e+07 0.0293684 1.50744e+06 9.43179e+07 5.18605e+06 22023 4.62056e+07 0 0.178085 0.986908 0.781935 9.30831e+07 0.00590815 2.02985e+07 1.08579e+07 2.04019e+07 214 2.04828e+07 1.50393e+07 0.00500815 2.0562e+07 50.0964 0.0159825 0.990966 0 50.1271 GTEX-13NYC-0826-SM-5N9FP 1 B1 2 pieces; well trimmed with mild atherosclerotic changes 5.7 Blood Vessel Artery - Tibial 0007610 990 683 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986317 307088 0.973759 0.98777 0.788825 22085 1 76 0.00399794 205 0 9.4875e+07 0.0259354 1.16912e+06 9.60497e+07 4.79773e+06 22109 4.70769e+07 0 0.184934 0.98777 0.779178 9.4875e+07 0.00421769 2.05968e+07 7.90431e+06 2.06267e+07 238 2.05922e+07 1.52837e+07 0.00410766 2.07623e+07 50.2057 0.0121721 0.989223 0 50.0362 GTEX-13NYC-2426-SM-5MR3K 2 B1 2 pieces; nodular goiter with regressive changes, patchy lymphocytic infiltrate; one of two pieces consists of 30% fibrovasular and adipose tissue (outlined) 6.4 Thyroid Thyroid 0002046 1035 638 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991783 285417 0.969417 0.99235 0.801917 24476 1 76 0.00271111 213 0 9.74342e+07 0.0302469 778544 9.81854e+07 3.98249e+06 24509 4.85379e+07 0 0.167499 0.99235 0.795783 9.74342e+07 0.00290837 2.13545e+07 1.05567e+07 2.14583e+07 237 2.14041e+07 1.8281e+07 0.00280969 2.14716e+07 50.0787 0.00792933 0.992916 0 50.1213 GTEX-13NYC-2626-SM-5K7VN 1 B1 1 piece; salivary gland (~35%)surrounded by lip, stroma, and skeletal muscle representing (~65%) 6.1 Salivary Gland Minor Salivary Gland 0006330 1070 603 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.986551 219816 0.973699 0.989026 0.789141 24769 1 76 0.00434414 162 0 8.43113e+07 0.0260366 1.05066e+06 8.52469e+07 5.52793e+06 24795 4.18933e+07 0 0.184558 0.989026 0.780481 8.43113e+07 0.00499179 1.85222e+07 9.82891e+06 1.86871e+07 190 1.86812e+07 1.31864e+07 0.00466716 1.87242e+07 50.0574 0.0123249 0.9915 0 50.2216 GTEX-13NYC-2826-SM-5K7WR 2 B1 2 pieces; fragmented, focus of meninges (outlined) 7.1 Brain Brain - Cortex 0001870 1075 598 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991346 383965 0.959404 0.993525 0.81965 23761 1 76 0.00260655 200 0 7.86612e+07 0.0401467 2.63457e+06 7.91738e+07 1.36307e+07 23776 3.91572e+07 0 0.139754 0.993525 0.814343 7.86612e+07 0.00371831 1.72969e+07 1.59721e+07 1.73043e+07 247 1.73082e+07 1.07429e+07 0.00316121 1.74631e+07 50.2227 0.0332758 0.995705 0 50.0107 GTEX-13NYS-0003-SM-5DU5X B1 Blood Whole Blood 0013756 625 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NYS-0003-SM-5HJPP B1 Blood Whole Blood 0013756 625 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13NYS-0003-SM-6WSB2 B1 Blood Whole Blood 0013756 625 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 10/12/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-13NYS-0011-R10a-SM-5MR4S B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 615 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992703 418567 0.955671 0.993211 0.840422 22867 1 76 0.00285683 200 0 7.52279e+07 0.0440238 3.78876e+06 7.57421e+07 2.90271e+06 22886 3.75e+07 0 0.115249 0.993211 0.834716 7.52279e+07 0.00285165 1.64284e+07 1.59826e+07 1.65907e+07 254 1.65163e+07 9.45218e+06 0.00285424 1.65404e+07 50.0365 0.0500218 0.993718 0 50.2458 GTEX-13NYS-0011-R10a-SM-AHZ6V B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 615 ChIP-Seq GTEX-13NYS-0011-R11b-SM-5MR4P B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 615 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.989665 410897 0.94424 0.99048 0.718775 23367 1 76 0.00319252 161 0 8.1867e+07 0.0554213 1.30901e+06 8.26538e+07 3.23741e+06 23399 4.07148e+07 0 0.225465 0.99048 0.711933 8.1867e+07 0.00339793 1.77368e+07 1.48173e+07 1.78109e+07 196 1.77757e+07 9.03308e+06 0.00329514 1.7839e+07 50.0889 0.0158373 0.991295 0 50.1042 GTEX-13NYS-0011-R1b-SM-5MR55 B1, A1 6.8 Brain Brain - Hippocampus 0001954 615 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992502 691450 0.952556 0.993157 0.830334 22277 1 76 0.00295922 204 0 7.42063e+07 0.047182 7.39254e+06 7.47176e+07 2.75603e+06 22291 3.69813e+07 0 0.122222 0.993157 0.824651 7.42063e+07 0.00309522 1.62657e+07 2.72834e+07 1.65019e+07 224 1.64057e+07 8.85971e+06 0.00302717 1.6424e+07 50.0279 0.0989398 0.993811 0 50.3603 GTEX-13NYS-0011-R2b-SM-5MR4G B1, A1 6.7 Brain Brain - Substantia nigra 0002038 615 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993916 355880 0.96839 0.994435 0.849187 22545 1 76 0.00294532 272 0 8.12815e+07 0.0313848 7.28607e+06 8.17363e+07 3.34663e+06 22561 4.05181e+07 0 0.119203 0.994435 0.844462 8.12815e+07 0.00299254 1.79641e+07 1.81947e+07 1.8311e+07 277 1.80776e+07 9.42837e+06 0.00296892 1.82414e+07 50.2255 0.0891412 0.994955 0 50.4781 GTEX-13NYS-0011-R3b-SM-5MR41 B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 615 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992611 920192 0.947289 0.993068 0.828374 22879 1 76 0.0029047 269 0 8.79916e+07 0.0523274 6.29909e+06 8.86059e+07 3.57388e+06 22898 4.38667e+07 0 0.118915 0.993068 0.822631 8.79916e+07 0.00292556 1.90875e+07 3.67968e+07 1.93529e+07 288 1.92327e+07 1.08812e+07 0.00291512 1.92674e+07 50.045 0.0710911 0.993524 0 50.3451 GTEX-13NYS-0011-R4b-SM-5MR3O B1, A1 6.3 Brain Brain - Amygdala 0001876 615 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993327 547795 0.968215 0.99381 0.840705 23206 1 76 0.00300617 276 0 1.17192e+08 0.0315429 1.28739e+07 1.17922e+08 4.55329e+06 23224 5.84399e+07 0 0.12751 0.99381 0.835502 1.17192e+08 0.00299292 2.56946e+07 3.66186e+07 2.623e+07 324 2.58054e+07 1.34643e+07 0.00299955 2.61937e+07 50.3734 0.109173 0.994293 0 50.5156 GTEX-13NYS-0011-R5a-SM-5MR4D B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 615 BP-46977 RNA isolation_PAXgene Tissue miRNA 12/11/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993984 447451 0.961251 0.994467 0.825701 23020 1 76 0.0029938 268 0 8.08057e+07 0.0384622 6.0823e+06 8.12553e+07 3.13037e+06 23031 4.02875e+07 0 0.13555 0.994467 0.821133 8.08057e+07 0.00297093 1.77128e+07 2.11696e+07 1.78529e+07 257 1.77088e+07 9.66366e+06 0.00298237 1.79023e+07 50.2717 0.0748541 0.994951 0 50.1969 GTEX-13NYS-0011-R6b-SM-5MR3R B1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 615 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992698 350699 0.958647 0.993122 0.826394 23365 1 76 0.00296705 199 0 7.84754e+07 0.0410395 6.15625e+06 7.90189e+07 3.034e+06 23386 3.91093e+07 0 0.132253 0.993122 0.820709 7.84754e+07 0.00303321 1.72113e+07 1.45955e+07 1.7372e+07 249 1.72671e+07 9.66453e+06 0.00300012 1.73584e+07 50.1318 0.0779087 0.993546 0 50.2323 GTEX-13NYS-0011-R8a-SM-5MR5H B1, A1 6.6 Brain Brain - Hypothalamus 0001898 615 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992726 394027 0.965576 0.993217 0.849232 22654 1 76 0.00302682 272 0 8.20562e+07 0.0342094 7.81236e+06 8.26165e+07 3.19353e+06 22668 4.09048e+07 0 0.116345 0.993217 0.843472 8.20562e+07 0.00305868 1.81329e+07 2.0215e+07 1.84513e+07 276 1.82485e+07 9.4202e+06 0.00304274 1.83817e+07 50.1819 0.0945617 0.993708 0 50.4351 GTEX-13NYS-0011-R9b-SM-5MR44 B1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 615 BP-47085 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993856 438906 0.960057 0.994402 0.827419 22962 1 76 0.00285477 217 0 7.60678e+07 0.0396851 3.95672e+06 7.64961e+07 2.97961e+06 22981 3.79178e+07 0 0.132637 0.994402 0.822787 7.60678e+07 0.00294727 1.67949e+07 1.50504e+07 1.71054e+07 228 1.69193e+07 1.0101e+07 0.00290099 1.70205e+07 50.1491 0.0517245 0.994948 0 50.458 GTEX-13NYS-0126-SM-5MR3W 1 B1 6 pieces; attenuated epidermis (25um), solar elastosis; well trimmed, 10% dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 846 804 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991972 254075 0.978943 0.992622 0.814827 23003 1 76 0.00277029 187 0 8.57215e+07 0.0208056 815978 8.63586e+07 3.37485e+06 23029 4.27146e+07 0 0.164115 0.992622 0.808816 8.57215e+07 0.00296965 1.89551e+07 9.11448e+06 1.90851e+07 200 1.90328e+07 1.6398e+07 0.00286991 1.90677e+07 50.0458 0.00944872 0.993273 0 50.1709 GTEX-13NYS-0226-SM-5MR49 0 B1 2 pieces; <10% fibrous component 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 850 800 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990868 280736 0.97526 0.991483 0.792841 22914 1 76 0.00290773 166 0 8.28923e+07 0.0245126 1.14985e+06 8.36043e+07 3.3761e+06 22940 4.12841e+07 0 0.182419 0.991483 0.786088 8.28923e+07 0.00314294 1.82939e+07 8.4465e+06 1.84628e+07 198 1.8365e+07 1.33129e+07 0.00302526 1.84498e+07 50.1151 0.0137534 0.992099 0 50.2297 GTEX-13NYS-0326-SM-5MR4L 1 B1 2 pieces; slight atrophy; 1 piece with 30% internal fat; other <5% fat 8.3 Muscle Muscle - Skeletal 0011907 853 797 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.994223 271140 0.982733 0.994699 0.840977 20639 1 76 0.00260714 217 0 9.06245e+07 0.017012 1.4403e+06 9.11075e+07 3.42167e+06 20656 4.51883e+07 0 0.141756 0.994699 0.836519 9.06245e+07 0.00266277 1.9991e+07 9.38845e+06 2.00484e+07 251 2.00252e+07 1.84314e+07 0.00263494 2.00535e+07 50.0353 0.0158088 0.995174 0 50.0716 GTEX-13NYS-0326-SM-CYKVV 1 B1 2 pieces; slight atrophy; 1 piece with 30% internal fat; other <5% fat 8.3 Muscle Muscle - Skeletal 0011907 853 797 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 RIP-Seq GTEX-13NYS-0426-SM-5MR4X 1 B1 2 pieces; 10% external fat, 5% internal fat 6.9 Nerve Nerve - Tibial 0001323 857 793 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 EXCLUDE 0.990622 266000 0.965724 0.991249 0.821604 27186 1 76 0.0027864 279 0 9.85676e+07 0.03406 761003 9.94378e+07 3.88029e+06 27220 4.9103e+07 0 0.14412 0.991249 0.814414 9.85676e+07 0.00292944 2.13221e+07 1.3318e+07 2.15889e+07 327 2.14215e+07 1.64354e+07 0.00285787 2.15615e+07 50.1628 0.00765306 0.991875 0 50.3109 GTEX-13NYS-0526-SM-5J1OF 1 B1 2 pieces; atherosclerotic plaque 40% and 10%; blood clot in lumen; well trimmed 7.7 Blood Vessel Artery - Tibial 0007610 862 788 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987195 211731 0.974705 0.989435 0.802447 22261 1 76 0.00416108 202 0 9.33656e+07 0.0249435 751055 9.43625e+07 5.22406e+06 22284 4.6382e+07 0 0.172258 0.989435 0.793969 9.33656e+07 0.00499804 2.02121e+07 7.41024e+06 2.03709e+07 204 2.03815e+07 1.67605e+07 0.00457862 2.04019e+07 50.025 0.00795926 0.991675 0 50.1957 GTEX-13NYS-0626-SM-5L3F1 1 B1 6 pieces; attenuated epidermis,(19um); well dissected; <5% dermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 872 778 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986157 277925 0.974017 0.990649 0.787092 22312 1 76 0.00319604 154 0 6.81794e+07 0.0257717 520768 6.8823e+07 6.74745e+06 22334 3.38387e+07 0 0.186925 0.990649 0.779732 6.81794e+07 0.00448069 1.49904e+07 8.3994e+06 1.50516e+07 154 1.51131e+07 1.15218e+07 0.00383545 1.52221e+07 50.1798 0.00756677 0.99514 0 50.1017 GTEX-13NYS-0726-SM-5J1OR 1 B1 2 pieces; 10% & <5% fibrous component 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 917 733 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.983937 224416 0.972671 0.98579 0.805919 23590 1 76 0.00416103 202 0 9.52012e+07 0.0270462 1.58041e+06 9.65735e+07 5.93008e+06 23615 4.72635e+07 0 0.166753 0.98579 0.794467 9.52012e+07 0.00504908 2.08744e+07 1.13504e+07 2.09566e+07 216 2.09817e+07 1.69957e+07 0.00460422 2.10339e+07 50.0621 0.0163648 0.987644 0 50.0982 GTEX-13NYS-1026-SM-5KLZT 2 B1 2 pieces; 2.8 mm benign hyperplastic glandular and stromal nodule 6.1 Prostate Prostate 0002367 951 699 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984556 107400 0.968036 0.987141 0.751703 23668 1 76 0.00405758 128 0 6.41264e+07 0.0317173 1.35313e+06 6.49617e+07 3.15179e+06 23698 3.18456e+07 0 0.216333 0.987141 0.742037 6.41264e+07 0.00533796 1.40868e+07 6.92809e+06 1.41793e+07 139 1.41906e+07 9.46858e+06 0.00469609 1.42392e+07 50.0856 0.0208297 0.989726 0 50.1635 GTEX-13NYS-1626-SM-5J2MU 2 B1 2 pieces; emphysema, fibrosis, bronchiectasis; large bronchus with calcified cartilage sampled [outlined] 5.9 Lung Lung 0008952 969 681 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983008 178883 0.973822 0.986793 0.769547 24675 1 76 0.00451738 162 0 8.87015e+07 0.0258227 939787 8.98886e+07 4.78288e+06 24705 4.39897e+07 0 0.204275 0.986793 0.759384 8.87015e+07 0.0062692 1.955e+07 9.19892e+06 1.96529e+07 176 1.96951e+07 1.44559e+07 0.00538993 1.98282e+07 50.1683 0.010455 0.990579 0 50.1312 GTEX-13NYS-1626-SM-CYKVW 2 B1 2 pieces; emphysema, fibrosis, bronchiectasis; large bronchus with calcified cartilage sampled [outlined] 5.9 Lung Lung 0008952 969 681 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 RIP-Seq GTEX-13NYS-1926-SM-5IJCB 1 B1 2 pieces; external & internal fat occupies 50% & 25% 6 Heart Heart - Atrial Appendage 0006631 981 669 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98896 187496 0.979415 0.992243 0.829073 21859 1 76 0.00247128 155 0 7.1777e+07 0.0203412 3.24442e+06 7.23381e+07 9.39696e+06 21878 3.5687e+07 0 0.150342 0.992243 0.822642 7.1777e+07 0.00412862 1.5682e+07 8.90797e+06 1.56655e+07 173 1.56961e+07 1.17018e+07 0.00329721 1.58717e+07 50.2782 0.0448508 0.995527 0 49.9737 GTEX-13NYS-2926-SM-5IFGH 2 B1 1 piece; anterior and posterior (outlined) present 6 Pituitary Pituitary 0000007 1109 541 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.985665 686514 0.938458 0.989548 0.730682 24561 1 76 0.00245849 127 0 6.7325e+07 0.0612829 377087 6.80361e+07 7.64039e+06 24590 3.34294e+07 0 0.207776 0.989548 0.723045 6.7325e+07 0.00409453 1.36314e+07 2.62547e+07 1.37596e+07 141 1.38244e+07 1.08547e+07 0.0032733 1.38251e+07 50.0012 0.00554245 0.993432 0 50.234 GTEX-13NYS-3126-SM-5KLYV 1 B1 2 pieces; meninges present [outlined] 6.9 Brain Brain - Cortex 0001870 1115 535 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987406 599030 0.952775 0.989855 0.791659 24979 1 76 0.00409608 270 0 1.01129e+08 0.0468652 4.49508e+06 1.02166e+08 4.77999e+06 25001 5.02934e+07 0 0.161116 0.989855 0.783627 1.01129e+08 0.00504057 2.18971e+07 2.77386e+07 2.21566e+07 277 2.21609e+07 1.25108e+07 0.00456716 2.21234e+07 49.9577 0.0439979 0.992303 0 50.2945 GTEX-13NYS-3126-SM-CYKVR 1 B1 2 pieces; meninges present [outlined] 6.9 Brain Brain - Cortex 0001870 1115 535 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13NZ8-0004-SM-5DU4L C1 Blood Whole Blood 0013756 1259 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NZ8-0004-SM-5HJPC C1 Blood Whole Blood 0013756 1259 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13NZ8-0004-SM-6WSBJ C1 Blood Whole Blood 0013756 1259 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NZ8-0011-R1b-SM-5KM3V C1, A1 6 Brain Brain - Hippocampus 0001954 1273 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990888 1.17409e+06 0.94694 0.992702 0.807109 21762 1 76 0.00335131 368 0 9.50075e+07 0.0529278 1.32445e+07 9.5706e+07 5.89998e+06 21777 4.72947e+07 0 0.139831 0.992702 0.801219 9.50075e+07 0.00427554 2.0334e+07 5.32144e+07 2.09758e+07 354 2.06248e+07 5.691e+06 0.00381258 2.08317e+07 50.2496 0.138387 0.994516 0 50.7768 GTEX-13NZ8-0011-R8b-SM-5KM48 C1, A1 6.3 Brain Brain - Hypothalamus 0001898 1273 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989409 715014 0.954182 0.991591 0.82758 22157 1 76 0.00343247 266 0 8.58681e+07 0.0456979 1.35269e+07 8.65963e+07 5.64974e+06 22168 4.27399e+07 0 0.126602 0.991591 0.820621 8.58681e+07 0.00426945 1.83467e+07 3.95344e+07 1.92095e+07 323 1.88904e+07 4.81092e+06 0.00385004 1.88291e+07 49.9188 0.156207 0.993773 0 51.1486 GTEX-13NZ8-0126-SM-5IJCT 1 C1 2 pieces; mammary duct ectasia 6.7 Breast Breast - Mammary Tissue 0008367 1325 498 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989294 171094 0.973421 0.992016 0.740176 24187 1 76 0.00236214 132 0 6.68876e+07 0.0262664 236680 6.74259e+07 8.31114e+06 24216 3.32448e+07 0 0.233245 0.992016 0.734266 6.68876e+07 0.00404699 1.47183e+07 7.00761e+06 1.4775e+07 144 1.4775e+07 1.09103e+07 0.00320225 1.48973e+07 50.2062 0.00351022 0.994738 0 50.0962 GTEX-13NZ8-0226-SM-5J2OK 1 C1 2 pieces; microfollicular adenomatous nodules; 15% external fat on 1 piece 6.1 Thyroid Thyroid 0002046 1330 494 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.97987 261636 0.961653 0.984137 0.759507 24438 1 76 0.00441624 157 0 8.40078e+07 0.0380669 912700 8.53619e+07 4.86254e+06 24474 4.16377e+07 0 0.202146 0.984137 0.747459 8.40078e+07 0.00624657 1.824e+07 9.83235e+06 1.83719e+07 169 1.84525e+07 1.29451e+07 0.00532744 1.84998e+07 50.064 0.0106921 0.988403 0 50.1801 GTEX-13NZ8-0326-SM-5L3DF 1 C1 2 pieces; emphysema; moderate vascular congestion and patchy alveolar hemorrhage 6 Lung Lung 0008952 1332 492 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.983591 163094 0.964041 0.988129 0.787612 22647 1 76 0.00322078 141 0 6.1773e+07 0.035703 313922 6.25151e+07 5.9759e+06 22664 3.06481e+07 0 0.176429 0.988129 0.778262 6.1773e+07 0.00448795 1.36175e+07 1.39292e+07 1.36944e+07 152 1.37616e+07 9.70524e+06 0.00385146 1.38104e+07 50.0885 0.00502154 0.992666 0 50.1408 GTEX-13NZ8-0826-SM-5MR3I 1 C1 6 pieces; well trimmed deep surface; up to 30% intradermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1345 482 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992301 231373 0.977558 0.992908 0.815699 23218 1 76 0.00278577 228 0 9.01928e+07 0.0222217 1.07498e+06 9.0837e+07 3.36852e+06 23241 4.49375e+07 0 0.16186 0.992908 0.809913 9.01928e+07 0.00305851 1.99544e+07 9.72768e+06 2.01102e+07 234 2.00082e+07 1.54758e+07 0.00292206 2.01204e+07 50.1398 0.0118342 0.993514 0 50.1945 GTEX-13NZ8-0926-SM-5MR3U 0 C1 2 pieces; 2% fibrous content 6 Adipose Tissue Adipose - Subcutaneous 0002190 1348 480 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990352 247235 0.972312 0.99093 0.789432 23193 1 76 0.00286102 199 0 8.70492e+07 0.0273899 635862 8.7846e+07 3.56237e+06 23228 4.33458e+07 0 0.18288 0.99093 0.782272 8.70492e+07 0.00310266 1.90667e+07 1.13788e+07 1.91773e+07 212 1.90956e+07 1.41523e+07 0.00298177 1.92062e+07 50.1444 0.00723837 0.991507 0 50.1445 GTEX-13NZ8-1226-SM-5KM4A 1 C1 6 pieces; well trimmed deep surface; 20% intradermal fat; 2 have prominent hair follicles 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1353 477 BP-46650 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.982531 126903 0.979019 0.984532 0.744248 22058 1 76 0.00328173 132 0 6.46769e+07 0.0207667 563686 6.56931e+07 4.13119e+06 22086 3.21286e+07 0 0.234772 0.984532 0.732736 6.46769e+07 0.00444046 1.43514e+07 6.22837e+06 1.44064e+07 140 1.44136e+07 1.01564e+07 0.00385991 1.44739e+07 50.1043 0.0085806 0.986532 0 50.0957 GTEX-13NZ8-1626-SM-5IJBC 1 C1 2 pieces; extensive calcified atheromatous plaque 6.4 Blood Vessel Artery - Tibial 0007610 1361 471 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.986438 199800 0.97155 0.989139 0.780621 22871 1 76 0.00240696 174 0 8.24296e+07 0.0281031 669799 8.33347e+07 9.72164e+06 22898 4.0925e+07 0 0.19093 0.989139 0.772142 8.24296e+07 0.0042443 1.7914e+07 7.8311e+06 1.80799e+07 194 1.80424e+07 1.34862e+07 0.00332312 1.81656e+07 50.1702 0.00803745 0.991839 0 50.2305 GTEX-13NZ8-2126-SM-5L3EO 0 C1 2 pieces; 20% internal fat 6.4 Muscle Muscle - Skeletal 0011907 1371 464 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4822 03/23/2014 TruSeq.v1 EXCLUDE 0.987709 234880 0.976536 0.992025 0.85665 19390 1 76 0.003163 145 0 6.14211e+07 0.0233364 5.18298e+06 6.19149e+07 6.09982e+06 19398 3.05161e+07 0 0.119886 0.992025 0.849817 6.14211e+07 0.00448569 1.37713e+07 1.06538e+07 1.36554e+07 168 1.36981e+07 7.66118e+06 0.00382147 1.39664e+07 50.4849 0.0837114 0.99634 0 49.7886 GTEX-13NZ8-3026-SM-5L3D4 1 C1 4 pieces; 1 has adherent meninges [outlined] 6 Brain Brain - Cerebellum 0002037 1415 425 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 EXCLUDE 0.983168 1.26001e+06 0.894003 0.987207 0.675938 22048 1 76 0.00351911 130 0 6.97764e+07 0.105576 2.12189e+06 7.06806e+07 7.69891e+06 22067 3.46394e+07 0 0.218065 0.987207 0.667291 6.97764e+07 0.00447412 1.4225e+07 5.79798e+07 1.44559e+07 151 1.45036e+07 5.98299e+06 0.00399466 1.44454e+07 49.8995 0.0300208 0.991247 0 50.4025 GTEX-13NZ9-0004-SM-5DU3T C1 Blood Whole Blood 0013756 229 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NZ9-0004-SM-5HJQY C1 Blood Whole Blood 0013756 229 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array EXCLUDE GTEX-13NZ9-0004-SM-6WSC6 C1 Blood Whole Blood 0013756 229 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NZ9-0126-SM-5K7XV 1 C1 2 pieces trace adherent fat, delineated 8.4 Heart Heart - Atrial Appendage 0006631 369 913 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991656 141898 0.979867 0.993927 0.817192 21790 1 76 0.00275019 130 0 6.94341e+07 0.0197637 1.343e+06 6.98584e+07 1.36646e+07 21802 3.45712e+07 0 0.162676 0.993927 0.812229 6.94341e+07 0.0037691 1.48013e+07 8.63651e+06 1.4616e+07 157 1.46483e+07 1.20184e+07 0.00325848 1.49064e+07 50.4366 0.0192247 0.996198 0 49.685 GTEX-13NZ9-0526-SM-5J1OX 0 C1 2 pieces, ~5-10% fascia/vascular elements, rep delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 390 894 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986698 248327 0.976845 0.988751 0.778193 23717 1 76 0.00417989 165 0 8.67821e+07 0.0227409 409108 8.77694e+07 5.09658e+06 23748 4.30903e+07 0 0.198652 0.988751 0.769439 8.67821e+07 0.00508184 1.91469e+07 6.82299e+06 1.92186e+07 183 1.9266e+07 1.4716e+07 0.00462993 1.92756e+07 50.0125 0.00466117 0.990803 0 50.0935 GTEX-13NZ9-0626-SM-5IJCO 0 C1 2 pieces, ~5% interstitial fat, rep delineated 8.1 Muscle Muscle - Skeletal 0011907 417 867 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991661 220850 0.9826 0.994 0.868725 19878 1 76 0.00222619 159 0 7.75553e+07 0.0171366 1.16633e+06 7.80235e+07 1.03611e+07 19887 3.86091e+07 0 0.113875 0.994 0.863512 7.75553e+07 0.00357097 1.70377e+07 8.77046e+06 1.69571e+07 199 1.69969e+07 1.53978e+07 0.002897 1.71717e+07 50.2558 0.0149485 0.996338 0 49.8814 GTEX-13NZ9-0726-SM-5J1ME 0 C1 2 pieces, partial rim of fat on one section ~0.4mm, delineated, generally clean sections 7.2 Nerve Nerve - Tibial 0001323 421 864 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984963 228290 0.967536 0.986814 0.745082 24537 1 76 0.00417499 161 0 7.99033e+07 0.032144 204205 8.0971e+07 4.55354e+06 24574 3.96648e+07 0 0.222454 0.986814 0.735257 7.99033e+07 0.00517513 1.75509e+07 6.28188e+06 1.75998e+07 164 1.76076e+07 1.24755e+07 0.00467412 1.76877e+07 50.1135 0.00252195 0.988665 0 50.0695 GTEX-13NZ9-0826-SM-5J1NI 0 C1 2 pieces, clean sections, no fat 7 Blood Vessel Artery - Tibial 0007610 425 860 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987098 235202 0.97449 0.989307 0.81462 22943 1 76 0.00412064 152 0 7.82982e+07 0.0250612 241855 7.91445e+07 4.49774e+06 22968 3.89006e+07 0 0.15987 0.989307 0.805909 7.82982e+07 0.00511936 1.70758e+07 5.6994e+06 1.71591e+07 162 1.71897e+07 1.50716e+07 0.00461888 1.72146e+07 50.0362 0.00305587 0.991516 0 50.1216 GTEX-13NZ9-0926-SM-5KM12 2 C1 2 pieces, patchy, moderate congestion 6.6 Lung Lung 0008952 459 827 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.983112 232410 0.967367 0.985925 0.729685 24473 1 76 0.00426615 133 0 7.10916e+07 0.0322234 189352 7.21065e+07 3.59814e+06 24501 3.52649e+07 0 0.237682 0.985925 0.719415 7.10916e+07 0.00569592 1.563e+07 8.4811e+06 1.57088e+07 148 1.57505e+07 1.00746e+07 0.00497899 1.57837e+07 50.0527 0.002626 0.988738 0 50.1257 GTEX-13NZ9-1026-SM-5MR5K 0 C1 2 pieces gynecomastoid stromal and ductal hyperplasia (rep delineated) 7.1 Breast Breast - Mammary Tissue 0008367 463 823 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993166 204145 0.975728 0.993662 0.7879 24192 1 76 0.00295518 166 0 8.34475e+07 0.0239522 367872 8.39797e+07 3.33429e+06 24217 4.15871e+07 0 0.187828 0.993662 0.782907 8.34475e+07 0.00300443 1.84684e+07 7.16944e+06 1.85454e+07 192 1.85063e+07 1.44827e+07 0.00297979 1.85513e+07 50.0608 0.00438049 0.994158 0 50.104 GTEX-13NZ9-1126-SM-5MR37 1 C1 2 pieces, lymphocytic/Hashimoto thyroiditis, rep lymphoid aggregates delineated 6.6 Thyroid Thyroid 0002046 466 821 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.990173 296456 0.958945 0.990786 0.72247 25908 1 76 0.00340754 166 0 9.23665e+07 0.0391653 280017 9.32255e+07 3.37652e+06 25958 4.59314e+07 0 0.236475 0.990786 0.715813 9.23665e+07 0.00351126 2.01319e+07 1.48317e+07 2.02328e+07 194 2.02256e+07 1.39037e+07 0.00345937 2.0198e+07 49.9659 0.00300365 0.991399 0 50.125 GTEX-13NZ9-1226-SM-5MR3J 1 C1 6 pieces, atherosis up to ~0.8mm, rep delineated 6.4 Blood Vessel Artery - Aorta 0001496 468 820 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.988634 217203 0.969932 0.989024 0.777862 23658 1 76 0.00293494 198 0 8.87712e+07 0.0297341 280689 8.97564e+07 3.25238e+06 23687 4.41948e+07 0 0.19207 0.989024 0.769324 8.87712e+07 0.00309283 1.91209e+07 9.85741e+06 1.92015e+07 207 1.91179e+07 1.48319e+07 0.00301385 1.92472e+07 50.1685 0.00312723 0.989414 0 50.1052 GTEX-13NZ9-1326-SM-5MR3V 1 C1 2 pieces, micro (mainly) and macrovesicular steatosis involves ~70% parenchyma 5.7 Liver Liver 0001114 472 816 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993875 356076 0.971641 0.99433 0.839101 21602 1 76 0.00290356 203 0 8.50228e+07 0.0277091 714914 8.55076e+07 3.27839e+06 21617 4.23643e+07 0 0.132539 0.99433 0.834344 8.50228e+07 0.00303121 1.8441e+07 1.53691e+07 1.84843e+07 232 1.84375e+07 1.41787e+07 0.00296736 1.85314e+07 50.127 0.00836083 0.994785 0 50.0586 GTEX-13NZ9-2026-SM-5KM1U 1 C1 2 pieces, minimal vascular/mesothelial tissue 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 491 801 BP-46734 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986503 144286 0.973624 0.988909 0.78246 23301 1 76 0.00396351 130 0 6.60644e+07 0.0260672 153655 6.68053e+07 3.15687e+06 23324 3.28246e+07 0 0.191164 0.988909 0.773782 6.60644e+07 0.00517892 1.45267e+07 6.23298e+06 1.46123e+07 140 1.46354e+07 1.15077e+07 0.00456973 1.4659e+07 50.0404 0.00230004 0.991315 0 50.1469 GTEX-13NZ9-2626-SM-5L3FK 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 504 792 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985851 217827 0.973901 0.99019 0.773135 23733 1 76 0.0033905 134 0 6.07162e+07 0.0258512 487309 6.13178e+07 6.33485e+06 23756 3.01449e+07 0 0.200766 0.99019 0.765551 6.07162e+07 0.00458457 1.34236e+07 6.457e+06 1.34605e+07 133 1.35232e+07 9.77443e+06 0.00398492 1.36061e+07 50.1528 0.00794727 0.99453 0 50.0686 GTEX-13NZA-0003-SM-5DU5O B1 Blood Whole Blood 0013756 1055 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NZA-0003-SM-5HJQ4 B1 Blood Whole Blood 0013756 1055 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13NZA-0003-SM-6WSBM B1 Blood Whole Blood 0013756 1055 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NZA-0011-R10a-SM-AHZ6W B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1155 ChIP-Seq GTEX-13NZA-0011-R10b-SM-5KM54 B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 1155 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988736 914125 0.951934 0.990732 0.816315 22583 1 76 0.00354141 267 0 8.64184e+07 0.0478606 7.61334e+06 8.72269e+07 5.67234e+06 22593 4.30168e+07 0 0.13562 0.990732 0.808749 8.64184e+07 0.00436812 1.84765e+07 4.45269e+07 1.87415e+07 299 1.84923e+07 5.97846e+06 0.00395393 1.8876e+07 50.5134 0.0872821 0.992727 0 50.356 GTEX-13NZA-0011-R10b-SM-CYKRC B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 1155 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 RIP-Seq GTEX-13NZA-0011-R11b-SM-5KM4W B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 1155 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989505 622647 0.941453 0.991066 0.73629 23206 1 76 0.00350243 197 0 8.23168e+07 0.0582543 2.72076e+06 8.30588e+07 4.99656e+06 23231 4.09528e+07 0 0.205164 0.991066 0.729712 8.23168e+07 0.00421613 1.75913e+07 2.42856e+07 1.77336e+07 235 1.76991e+07 7.4074e+06 0.00385872 1.77428e+07 50.0617 0.032757 0.992628 0 50.2014 GTEX-13NZA-0011-R1b-SM-5LUAF B1, A1 5.7 Brain Brain - Hippocampus 0001954 1155 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989704 399270 0.963808 0.992034 0.814046 21120 1 76 0.0049166 143 0 6.0321e+07 0.0360125 4.90719e+06 6.08054e+07 5.12767e+06 21136 2.99971e+07 0 0.149762 0.992034 0.807561 6.0321e+07 0.00422569 1.3053e+07 2.65532e+07 1.33181e+07 167 1.31202e+07 4.3184e+06 0.00457195 1.33866e+07 50.5025 0.0807032 0.994364 0 50.5028 GTEX-13NZA-0011-R5b-SM-5KM4K B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1155 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986869 1.22126e+06 0.941838 0.988819 0.788634 20624 1 76 0.00370352 264 0 7.71002e+07 0.0580253 8.23148e+06 7.7972e+07 4.96697e+06 20631 3.83948e+07 0 0.153203 0.988819 0.779817 7.71002e+07 0.00448542 1.59957e+07 6.91911e+07 1.62996e+07 263 1.59639e+07 3.66508e+06 0.00409369 1.64584e+07 50.7626 0.10557 0.990769 0 50.4705 GTEX-13NZA-0011-R8b-SM-5KM2Q B1, A1 6.9 Brain Brain - Hypothalamus 0001898 1155 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990011 735441 0.948769 0.991837 0.805314 24526 1 76 0.00346591 198 0 8.02021e+07 0.0509464 4.7946e+06 8.08621e+07 4.91141e+06 24546 3.99076e+07 0 0.143455 0.991837 0.79874 8.02021e+07 0.00434991 1.72838e+07 2.92011e+07 1.75437e+07 252 1.74031e+07 7.58572e+06 0.00390709 1.75691e+07 50.2372 0.0592935 0.993664 0 50.3731 GTEX-13NZA-0011-R9b-SM-5MR5I B1, A1 7.8 Brain Brain - Spinal cord (cervical c-1) 0006469 1155 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993275 433799 0.960537 0.993751 0.817397 23184 1 76 0.00284709 286 0 8.12856e+07 0.0391581 3.44912e+06 8.17967e+07 3.11415e+06 23206 4.05114e+07 0 0.14314 0.993751 0.812289 8.12856e+07 0.00292667 1.79789e+07 1.56223e+07 1.82698e+07 258 1.80499e+07 1.05358e+07 0.00288686 1.8238e+07 50.2592 0.042167 0.994228 0 50.4013 GTEX-13NZA-0126-SM-5K7UH 1 B1 2 pieces; 1 includes portion of nerve 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 1327 528 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985922 198965 0.974421 0.988299 0.759297 24327 1 76 0.00462638 175 0 9.36449e+07 0.0252836 426049 9.47536e+07 6.27555e+06 24362 4.65391e+07 0 0.215124 0.988299 0.750412 9.36449e+07 0.00513287 2.05946e+07 9.74094e+06 2.07431e+07 195 2.07788e+07 1.51583e+07 0.00487902 2.07742e+07 49.9944 0.00449639 0.990675 0 50.1797 GTEX-13NZA-0226-SM-5K7Z7 2 B1 6 pieces; minimal attached and internal fat (<10%), epidermis measures 41 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1327 528 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989334 117647 0.972179 0.99194 0.76246 23427 1 76 0.0028674 144 0 6.14869e+07 0.0275876 267204 6.19865e+07 1.15585e+07 23454 3.05881e+07 0 0.209719 0.99194 0.756314 6.14869e+07 0.00415802 1.34545e+07 6.57695e+06 1.35302e+07 137 1.35417e+07 9.75164e+06 0.00351101 1.35959e+07 50.0998 0.00431068 0.994545 0 50.1404 GTEX-13NZA-0326-SM-5J1MK 1 B1 4 pieces; minimal attached fat on all (<10%) 6.3 Nerve Nerve - Tibial 0001323 1330 525 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986907 215226 0.967739 0.988628 0.724976 24755 1 76 0.0042171 176 0 8.82096e+07 0.0319914 288160 8.92242e+07 5.1436e+06 24804 4.38197e+07 0 0.242762 0.988628 0.716732 8.82096e+07 0.00502368 1.94265e+07 7.67024e+06 1.94602e+07 182 1.94614e+07 1.25761e+07 0.00461969 1.95705e+07 50.1397 0.00322962 0.99035 0 50.0434 GTEX-13NZA-0526-SM-5L3D7 1 B1 4 pieces (fragmented); includes trivial attached/internal fat, small portion of tendon 7.6 Muscle Muscle - Skeletal 0011907 1333 522 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988412 280415 0.979495 0.992543 0.862812 19608 1 76 0.00303786 135 0 7.59286e+07 0.0202921 697741 7.64991e+07 8.06413e+06 19620 3.77361e+07 0 0.116682 0.992543 0.856379 7.59286e+07 0.00418851 1.65148e+07 9.96885e+06 1.64988e+07 160 1.65986e+07 1.599e+07 0.00361079 1.66982e+07 50.1496 0.00912091 0.996674 0 49.9759 GTEX-13NZA-0526-SM-CYKQV 1 B1 4 pieces (fragmented); includes trivial attached/internal fat, small portion of tendon 7.6 Muscle Muscle - Skeletal 0011907 1333 522 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 RIP-Seq GTEX-13NZA-0826-SM-5K7WS 1 B1 7 pieces (fragmented); myocyte hypertrophy 5.8 Heart Heart - Atrial Appendage 0006631 1358 497 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.9904 208847 0.973856 0.99314 0.81646 21303 1 76 0.00296103 138 0 6.57637e+07 0.0259545 2.29975e+06 6.6218e+07 1.08066e+07 21317 3.27148e+07 0 0.157396 0.99314 0.810859 6.57637e+07 0.00446574 1.45241e+07 1.18634e+07 1.42238e+07 172 1.41797e+07 7.60784e+06 0.00371131 1.47364e+07 50.9627 0.0347299 0.99588 0 49.4777 GTEX-13NZA-1026-SM-5MR48 2 B1 2 pieces; includes minimal fat, vessels, and skeletal muscle 6.3 Thyroid Thyroid 0002046 1364 491 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991139 183838 0.974976 0.991578 0.812014 23163 1 76 0.00284396 172 0 8.20918e+07 0.0246892 249248 8.2789e+07 3.08259e+06 23189 4.08925e+07 0 0.162962 0.991578 0.805175 8.20918e+07 0.00300748 1.81832e+07 8.48042e+06 1.82748e+07 192 1.82128e+07 1.48529e+07 0.00292568 1.82893e+07 50.1049 0.00301064 0.992017 0 50.1255 GTEX-13NZA-1126-SM-5MR4K 1 B1 2 pieces; small attachment of fat and nerve, calcific atherosclerosis with narrowing of the lumen by 25-50% 6.1 Blood Vessel Artery - Coronary 0001621 1369 486 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.988387 182508 0.972079 0.989362 0.770067 22996 1 76 0.00301595 153 0 7.37867e+07 0.0275923 400481 7.45801e+07 2.81035e+06 23022 3.67072e+07 0 0.202012 0.989362 0.761875 7.37867e+07 0.00334519 1.59514e+07 7.00949e+06 1.60731e+07 167 1.59861e+07 1.18614e+07 0.00318041 1.61114e+07 50.1952 0.00536981 0.990337 0 50.1901 GTEX-13NZA-1426-SM-5KM4Y 2 B1 2 pieces; some fibrosis, pigmented macrophages 7.5 Lung Lung 0008952 1371 484 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.981069 178136 0.96791 0.983226 0.791039 23703 1 76 0.0036081 164 0 7.77692e+07 0.0317762 636753 7.9096e+07 5.27177e+06 23734 3.86195e+07 0 0.176871 0.983226 0.77777 7.77692e+07 0.00474283 1.70516e+07 8.80856e+06 1.71994e+07 187 1.71765e+07 1.09393e+07 0.00417422 1.72376e+07 50.0889 0.00805039 0.985384 0 50.2158 GTEX-13NZA-1726-SM-5J1NA 3 B1 2 pieces; severely autolyzed, some atrophy and mucinous metaplasia 6.4 Pancreas Pancreas 0001150 1377 478 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 EXCLUDE 0.984066 206395 0.974248 0.985873 0.792205 25037 1 76 0.00438198 171 0 8.99269e+07 0.0254624 976309 9.12155e+07 5.75621e+06 25073 4.46329e+07 0 0.182043 0.985873 0.781013 8.99269e+07 0.00515659 1.99183e+07 1.39669e+07 1.99859e+07 194 1.99843e+07 1.54484e+07 0.00476857 2.00858e+07 50.1268 0.0107033 0.98768 0 50.0847 GTEX-13NZA-2526-SM-5IJFX 1 B1 2 pieces; spermatogenesis 6.2 Testis Testis 0000473 1386 469 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985939 318205 0.9318 0.987912 0.713027 33744 1 76 0.00493706 178 0 9.62702e+07 0.0678588 844846 9.74481e+07 6.27238e+06 33815 4.78472e+07 0 0.218773 0.987912 0.704408 9.62702e+07 0.00522897 2.01076e+07 1.37249e+07 2.0222e+07 180 2.02812e+07 1.46077e+07 0.00508272 2.02211e+07 49.9258 0.0086697 0.989885 0 50.1419 GTEX-13NZA-3126-SM-5IJFU 2 B1 1 pieces; adenohypophysis and neurohypophysis 5.9 Pituitary Pituitary 0000007 1454 401 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986352 276577 0.970078 0.988299 0.759898 24804 1 76 0.00481091 162 0 8.96501e+07 0.0296345 1.05096e+06 9.07115e+07 5.72385e+06 24846 4.45487e+07 0 0.21018 0.988299 0.751007 8.96501e+07 0.00509488 1.97413e+07 7.96621e+06 1.99251e+07 197 1.99672e+07 1.27506e+07 0.00495261 1.98707e+07 49.8789 0.0115858 0.990247 0 50.2317 GTEX-13NZB-0004-SM-5DU5H B1 Blood Whole Blood 0013756 247 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13NZB-0004-SM-5HJRG B1 Blood Whole Blood 0013756 247 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13NZB-0004-SM-6WSBX B1 Blood Whole Blood 0013756 247 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13NZB-0226-SM-5KM1T 0 B1 2 pieces 6.4 Heart Heart - Left Ventricle 0006566 300 853 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986582 159696 0.98169 0.988817 0.816417 21363 1 76 0.00379944 267 0 9.34755e+07 0.0181706 3.32367e+06 9.45327e+07 4.20042e+06 21379 4.65259e+07 0 0.165273 0.988817 0.807287 9.34755e+07 0.0047208 2.05545e+07 2.90962e+07 2.04833e+07 265 2.05754e+07 1.24037e+07 0.00425908 2.0629e+07 50.065 0.035159 0.991051 0 49.9132 GTEX-13NZB-0426-SM-5KM26 1 B1 3 pieces; 20 and 40% fibrous and fatty 7.7 Heart Heart - Atrial Appendage 0006631 316 837 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.989346 189400 0.980745 0.991256 0.807597 21686 1 76 0.00363316 200 0 8.93711e+07 0.0189342 1.72261e+06 9.01595e+07 3.82598e+06 21704 4.44767e+07 0 0.173148 0.991256 0.800535 8.93711e+07 0.00453902 1.92485e+07 1.79184e+07 1.93713e+07 245 1.93046e+07 1.51356e+07 0.00408522 1.94666e+07 50.209 0.0191062 0.993165 0 50.159 GTEX-13NZB-0626-SM-5IFH6 1 B1 2 pieces; congestion 5.9 Liver Liver 0001114 323 830 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.98812 284769 0.969599 0.991076 0.786024 21051 1 76 0.00267459 152 0 7.38164e+07 0.0292908 1.87184e+06 7.4481e+07 8.38344e+06 21068 3.66748e+07 0 0.183575 0.991076 0.779009 7.38164e+07 0.00419313 1.6054e+07 1.54874e+07 1.61172e+07 202 1.60764e+07 7.87442e+06 0.00343159 1.6293e+07 50.3346 0.0251317 0.994032 0 50.0982 GTEX-13NZB-0826-SM-5K7X5 0 B1 2 pieces 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 326 827 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988812 153177 0.973124 0.991422 0.793911 23058 1 76 0.00269521 145 0 6.81583e+07 0.0265874 332343 6.8748e+07 1.19116e+07 23078 3.39088e+07 0 0.179213 0.991422 0.787101 6.81583e+07 0.003917 1.49459e+07 8.33602e+06 1.5044e+07 157 1.50538e+07 1.13718e+07 0.0033045 1.51064e+07 50.0874 0.00483422 0.994033 0 50.1636 GTEX-13NZB-1226-SM-5J2MW 1 B1 5 pieces; several clusters of submucosal glands present, patchy mild chronic inflammation and eosinophilic squamous surface 6.5 Esophagus Esophagus - Mucosa 0006920 347 806 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983123 247727 0.97357 0.987329 0.789974 22840 1 76 0.00448307 161 0 8.70725e+07 0.0261427 519313 8.819e+07 5.03958e+06 22864 4.31959e+07 0 0.183596 0.987329 0.779964 8.70725e+07 0.00622642 1.9575e+07 1.13156e+07 1.96843e+07 185 1.97633e+07 1.3521e+07 0.00535103 1.98544e+07 50.1149 0.00588857 0.991535 0 50.1392 GTEX-13NZB-2026-SM-5MR4M 1 B1 2 pieces; spermatogenesis is present 6.4 Testis Testis 0000473 380 773 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991946 294215 0.931041 0.99252 0.730703 32668 1 76 0.00281565 173 0 8.31671e+07 0.0686395 606996 8.37939e+07 3.48725e+06 32728 4.14497e+07 0 0.200338 0.99252 0.725238 8.31671e+07 0.00283558 1.73674e+07 1.0993e+07 1.7433e+07 173 1.74347e+07 1.37188e+07 0.00282561 1.74115e+07 49.9666 0.00724392 0.993093 0 50.0942 GTEX-13NZB-2126-SM-5MR4Y 0 B1 1 pieces; 70% fat, 30% stroma, no ductal elements noted 6.9 Breast Breast - Mammary Tissue 0008367 373 780 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993054 161463 0.974593 0.993658 0.793718 24282 1 76 0.00276343 212 0 8.29046e+07 0.0250927 358184 8.34337e+07 3.05149e+06 24326 4.1323e+07 0 0.180875 0.993658 0.788684 8.29046e+07 0.00282203 1.83118e+07 7.53155e+06 1.84624e+07 207 1.84185e+07 1.46111e+07 0.00279271 1.84081e+07 49.9859 0.00429304 0.994261 0 50.2048 GTEX-13NZB-2226-SM-5MR5B 1 B1 2 pieces; well trimmed 7 Blood Vessel Artery - Tibial 0007610 385 768 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99351 176217 0.976078 0.994055 0.83464 21263 1 76 0.00272155 209 0 8.54343e+07 0.0235015 439601 8.59452e+07 3.40437e+06 21281 4.25709e+07 0 0.141437 0.994055 0.829678 8.54343e+07 0.00278137 1.81244e+07 6.09373e+06 1.82938e+07 228 1.82201e+07 1.6381e+07 0.00275145 1.8245e+07 50.0342 0.0051149 0.994601 0 50.2326 GTEX-13NZB-2426-SM-5K7UF 1 B1 2 pieces; includes small portion of fibrovascular tissue and nerve 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 390 763 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985085 202842 0.97561 0.987592 0.7861 23523 1 76 0.00442417 169 0 8.84457e+07 0.0240734 541490 8.9557e+07 6.15214e+06 23554 4.39519e+07 0 0.18951 0.987592 0.776346 8.84457e+07 0.00497353 1.93959e+07 8.42974e+06 1.9564e+07 193 1.96192e+07 1.4369e+07 0.00469815 1.95568e+07 49.9203 0.00604632 0.990098 0 50.2157 GTEX-13NZB-2526-SM-5J1OM 1 B1 6 pieces; up to 25% attached fat on few sections, epidermis measures about 44 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 395 758 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987824 224823 0.971796 0.989783 0.787968 23410 1 76 0.004115 173 0 7.69034e+07 0.028024 653906 7.76972e+07 4.41632e+06 23435 3.82188e+07 0 0.183828 0.989783 0.779917 7.69034e+07 0.00489207 1.68507e+07 7.68842e+06 1.68897e+07 173 1.68762e+07 1.17083e+07 0.00450276 1.70118e+07 50.2002 0.00841608 0.991743 0 50.0578 GTEX-13NZB-2626-SM-5J2M7 1 B1 2 pieces; small attached portions of fat and tendon 7.7 Muscle Muscle - Skeletal 0011907 399 754 BP-46943 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985233 190562 0.984173 0.989134 0.877695 19359 1 76 0.00414535 164 0 8.51922e+07 0.0156176 1.00712e+06 8.6128e+07 4.83661e+06 19369 4.23181e+07 0 0.106478 0.989134 0.868158 8.51922e+07 0.00588881 1.8674e+07 9.06265e+06 1.86945e+07 181 1.87967e+07 1.81571e+07 0.00501364 1.88689e+07 50.0958 0.0116933 0.993035 0 50.0273 GTEX-13NZB-5001-SM-AN3ZC B1 Heart Heart - Left Ventricle 0006566 307 ChIP-Seq GTEX-13NZB-5019-SM-AN3ZE B1 Muscle Muscle - Skeletal 0011907 400 ChIP-Seq GTEX-13O1R-0002-SM-5DU3N B1 Blood Whole Blood 0013756 660 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O1R-0002-SM-5HJP9 B1 Blood Whole Blood 0013756 660 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13O1R-0002-SM-6WSB4 B1 Blood Whole Blood 0013756 660 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6235,LCSET-6066 10/30/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-13O1R-0011-R9b-SM-5KM33 B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 660 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988996 273174 0.970084 0.991036 0.843472 20439 1 76 0.00368892 276 0 7.72849e+07 0.0297418 8.55048e+06 7.79839e+07 4.75556e+06 20447 3.84662e+07 0 0.126612 0.991036 0.835911 7.72849e+07 0.0046544 1.676e+07 2.44228e+07 1.75852e+07 285 1.70794e+07 5.29102e+06 0.00417066 1.73737e+07 50.4272 0.109644 0.993077 0 51.2012 GTEX-13O1R-0126-SM-5L3EH 1 B1 6 pieces; hyperkeratosis; dermal mucinous change; 20% intradermal fat 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 801 489 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987402 203193 0.976097 0.991191 0.797687 22701 1 76 0.00318385 155 0 7.00076e+07 0.0236623 304835 7.06298e+07 6.98361e+06 22724 3.47916e+07 0 0.17841 0.991191 0.79066 7.00076e+07 0.00409344 1.53972e+07 6.74597e+06 1.54305e+07 153 1.54989e+07 1.23977e+07 0.00363691 1.55755e+07 50.1233 0.00431595 0.994979 0 50.054 GTEX-13O1R-0226-SM-5K7U5 1 B1 2 pieces; large blood vessel along one edge 8 Adipose Tissue Adipose - Subcutaneous 0002190 805 485 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98875 229809 0.977099 0.990741 0.811038 23266 1 76 0.00425865 281 0 1.00864e+08 0.0226286 507874 1.01806e+08 6.38074e+06 23298 5.01622e+07 0 0.166061 0.990741 0.803528 1.00864e+08 0.00471877 2.21726e+07 9.10314e+06 2.23451e+07 258 2.23484e+07 1.81326e+07 0.00448825 2.23633e+07 50.0167 0.00498863 0.992731 0 50.1938 GTEX-13O1R-0426-SM-5K7WG 1 B1 2 pieces; 40% internal & external fat 7.5 Nerve Nerve - Tibial 0001323 808 482 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.980481 239028 0.967526 0.982641 0.731715 25142 1 76 0.00446728 229 0 1.08386e+08 0.0322001 301881 1.103e+08 7.06491e+06 25195 5.38569e+07 0 0.235812 0.982641 0.719013 1.08386e+08 0.00499782 2.37687e+07 9.64353e+06 2.39112e+07 246 2.39576e+07 1.67643e+07 0.00473197 2.39501e+07 49.9922 0.0027369 0.984801 0 50.1495 GTEX-13O1R-0526-SM-5K7XU 0 B1 2 pieces 8 Muscle Muscle - Skeletal 0011907 809 481 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.99095 144422 0.98153 0.993164 0.858501 19076 1 76 0.00264899 163 0 6.60922e+07 0.0183054 646805 6.65472e+07 1.23863e+07 19082 3.29209e+07 0 0.123028 0.993164 0.852633 6.60922e+07 0.00379177 1.46733e+07 1.12722e+07 1.4455e+07 171 1.44662e+07 1.09778e+07 0.0032191 1.47945e+07 50.5609 0.0097195 0.995378 0 49.6253 GTEX-13O1R-0726-SM-5IJEI 1 B1 2 pieces; spermatogenesis 6 Testis Testis 0000473 816 474 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985609 312547 0.929036 0.987341 0.723512 34129 1 76 0.00488616 214 0 1.016e+08 0.0706754 1.01019e+06 1.02903e+08 6.42184e+06 34203 5.05261e+07 0 0.205524 0.987341 0.714353 1.016e+08 0.00504632 2.10374e+07 1.67505e+07 2.12225e+07 223 2.12605e+07 1.48705e+07 0.0049661 2.11604e+07 49.882 0.00981693 0.989073 0 50.219 GTEX-13O1R-0826-SM-5J2MB 1 B1 2 pieces; mild lymphocytic infiltrate 7.3 Thyroid Thyroid 0002046 822 468 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982672 177898 0.96852 0.986759 0.749668 24503 1 76 0.00451483 137 0 8.55331e+07 0.0311509 137365 8.66809e+07 4.95612e+06 24541 4.24515e+07 0 0.218852 0.986759 0.739742 8.55331e+07 0.00613963 1.86775e+07 8.98738e+06 1.87672e+07 158 1.88768e+07 1.44128e+07 0.00532386 1.88908e+07 50.0186 0.00158472 0.990845 0 50.1198 GTEX-13O1R-0926-SM-5L3DS 1 B1 2 pieces; 1 has 60% fat & fibrous stroma 8.2 Heart Heart - Atrial Appendage 0006631 826 464 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988851 196961 0.980392 0.992543 0.820391 20685 1 76 0.00330893 150 0 6.93176e+07 0.0193794 1.03634e+06 6.98384e+07 7.38041e+06 20700 3.4466e+07 0 0.160001 0.992543 0.814273 6.93176e+07 0.00402778 1.49275e+07 1.45592e+07 1.47759e+07 166 1.4802e+07 1.0458e+07 0.00366702 1.51229e+07 50.5361 0.014839 0.996236 0 49.7448 GTEX-13O1R-1026-SM-5KM2L 1 B1 6 pieces; flat plaques; fatty adventitia on 3 pieces 7.3 Blood Vessel Artery - Aorta 0001496 828 462 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.983164 155543 0.973713 0.985142 0.762604 22467 1 76 0.00335721 133 0 7.03001e+07 0.0259963 106794 7.13604e+07 4.40091e+06 22492 3.49404e+07 0 0.211108 0.985142 0.751273 7.03001e+07 0.00441788 1.52909e+07 5.52952e+06 1.54219e+07 148 1.54247e+07 1.20436e+07 0.00388648 1.54266e+07 50.0032 0.00149654 0.987119 0 50.2133 GTEX-13O1R-1226-SM-5J1NU 1 B1 2 pieces; foci of hypereosinophilic myofibers consistent with ischemia 6.4 Heart Heart - Left Ventricle 0006566 840 450 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986109 210023 0.980065 0.988239 0.860893 21528 1 76 0.00422954 198 0 7.95276e+07 0.0197937 3.66149e+06 8.04741e+07 4.67966e+06 21539 3.95054e+07 0 0.119172 0.988239 0.850767 7.95276e+07 0.00527989 1.76721e+07 1.01874e+07 1.78202e+07 227 1.77702e+07 9.596e+06 0.00475358 1.78726e+07 50.1438 0.045499 0.990368 0 50.2087 GTEX-13O1R-1326-SM-5IJF5 1 B1 6 pieces; well dissected 8 Esophagus Esophagus - Mucosa 0006920 845 445 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986261 287399 0.976463 0.988178 0.751403 23436 1 76 0.00472158 167 0 9.92693e+07 0.0233282 190008 1.00457e+08 6.73934e+06 23470 4.9349e+07 0 0.22506 0.988178 0.742519 9.92693e+07 0.0050349 2.23795e+07 1.14905e+07 2.25169e+07 196 2.25870e+07 1.7426e+07 0.00487793 2.25038e+07 49.9077 0.00189144 0.990094 0 50.153 GTEX-13O1R-1526-SM-5J1O7 1 B1 6 pieces; well dissected 6.5 Esophagus Esophagus - Muscularis 0004648 847 443 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98512 194212 0.969517 0.987354 0.785953 23126 1 76 0.00421969 149 0 7.65526e+07 0.0302978 499222 7.75331e+07 4.34581e+06 23155 3.8018e+07 0 0.183564 0.987354 0.776014 7.65526e+07 0.00501712 1.65253e+07 6.61897e+06 1.66355e+07 169 1.66341e+07 1.12818e+07 0.00461751 1.66899e+07 50.0836 0.00643882 0.989588 0 50.1662 GTEX-13O1R-1826-SM-5KM3B 2 B1 2 pieces; 50% internal & external fat 6.5 Pancreas Pancreas 0001150 851 439 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988592 245519 0.966813 0.990813 0.809854 21442 1 76 0.00335065 116 0 8.1022e+07 0.0328642 177113 8.17732e+07 5.52224e+06 21465 4.03007e+07 0 0.15696 0.990813 0.802413 8.1022e+07 0.00435809 1.83026e+07 1.95648e+07 1.86466e+07 122 1.86254e+07 2.21181e+07 0.00385324 1.85015e+07 49.8332 0.00216591 0.993035 0 50.4655 GTEX-13O1R-2026-SM-5KM3N 1 B1 2 pieces; <5% macrovesicular steatosis 6.6 Liver Liver 0001114 855 435 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986201 363316 0.974661 0.988633 0.82885 21750 1 76 0.00349562 209 0 8.35208e+07 0.0247153 2.52499e+06 8.44811e+07 5.70441e+06 21775 4.15185e+07 0 0.145811 0.988633 0.819429 8.35208e+07 0.00442667 1.82475e+07 1.30835e+07 1.85209e+07 213 1.85436e+07 1.44705e+07 0.00396 1.84175e+07 49.8294 0.0298882 0.991065 0 50.3719 GTEX-13O1R-2326-SM-5IJF9 2 B1 2 pieces; 1 has 50% internal fat; other is fat-free 6.4 Adrenal Gland Adrenal Gland 0002369 860 430 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98583 355411 0.965821 0.987941 0.775211 22619 1 76 0.00489501 165 0 8.36936e+07 0.0340154 2.76512e+06 8.47152e+07 5.87147e+06 22647 4.1589e+07 0 0.19061 0.987941 0.765863 8.36936e+07 0.00536353 1.82533e+07 1.44972e+07 1.84989e+07 193 1.84717e+07 1.0573e+07 0.00512877 1.84548e+07 49.9771 0.0326401 0.990051 0 50.3341 GTEX-13O1R-2426-SM-5KLZZ 1 B1 6 pieces; colonic type muscularis propria with 10% external fat 6.4 Colon Colon - Sigmoid 0001159 871 419 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985045 125560 0.974104 0.987661 0.821797 21873 1 76 0.00395784 141 0 6.96032e+07 0.0257019 301394 7.04728e+07 3.43372e+06 21894 3.4595e+07 0 0.152307 0.987661 0.811657 6.96032e+07 0.00515096 1.5082e+07 6.75092e+06 1.52576e+07 158 1.52495e+07 1.14712e+07 0.00455282 1.52655e+07 50.0261 0.00427674 0.990278 0 50.2895 GTEX-13O1R-2526-SM-5N9FW 2 B1 6 pieces; occasional sclerosed glomerulus; moderate arterial sclerosis 5.7 Kidney Kidney - Cortex 0001225 864 426 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988755 423017 0.970567 0.990449 0.824254 23651 1 76 0.00442168 268 0 9.93075e+07 0.0292968 1.20318e+07 1.00265e+08 4.88795e+06 23667 4.93939e+07 0 0.146313 0.990449 0.816381 9.93075e+07 0.00445939 2.19166e+07 2.49861e+07 2.21947e+07 311 2.21939e+07 1.02632e+07 0.0044405 2.20799e+07 49.8713 0.12 0.992143 0 50.3151 GTEX-13O1R-3226-SM-5KM58 1 B1 1 piece; both anterior and posterior portions represented (annotated) 7 Pituitary Pituitary 0000007 926 364 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989861 232894 0.964924 0.991499 0.740962 25522 1 76 0.00328368 161 0 8.67549e+07 0.0348498 402366 8.74987e+07 5.2762e+06 25571 4.31779e+07 0 0.223963 0.991499 0.734663 8.67549e+07 0.00406906 1.87321e+07 9.5879e+06 1.88998e+07 187 1.89174e+07 1.33016e+07 0.00367572 1.88487e+07 49.909 0.00459854 0.993137 0 50.2228 GTEX-13O21-0003-SM-5DU66 B1 Blood Whole Blood 0013756 -189 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O21-0003-SM-5HJPF B1 Blood Whole Blood 0013756 -189 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13O21-0003-SM-6WSB5 B1 Blood Whole Blood 0013756 -189 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13O21-0126-SM-5IJE8 1 B1 2 pieces, all cortex 8.2 Adrenal Gland Adrenal Gland 0002369 146 580 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.989259 202476 0.977601 0.990716 0.819191 23719 1 76 0.00459818 271 0 1.03141e+08 0.0221041 1.7671e+06 1.04107e+08 6.70439e+06 23753 5.13302e+07 0 0.15841 0.990716 0.811586 1.03141e+08 0.00468256 2.26204e+07 1.88712e+07 2.28748e+07 277 2.2782e+07 1.56552e+07 0.00464031 2.28594e+07 50.0848 0.0169738 0.992173 0 50.2795 GTEX-13O21-0326-SM-5J1N9 1 B1 2 pieces, minimal abnormalities 8 Heart Heart - Atrial Appendage 0006631 152 574 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989975 226966 0.977945 0.991846 0.830615 22512 1 76 0.00388408 198 0 8.78405e+07 0.0217661 1.30472e+06 8.85626e+07 4.55540e+06 22530 4.37122e+07 0 0.14733 0.991846 0.823842 8.78405e+07 0.004482 1.89087e+07 1.36033e+07 1.91008e+07 247 1.89573e+07 1.40678e+07 0.00418248 1.92046e+07 50.324 0.0147321 0.993718 0 50.2527 GTEX-13O21-0426-SM-5K7VR 1 B1 6 pieces, minimla atherosis 7.5 Blood Vessel Artery - Aorta 0001496 157 569 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.988009 203061 0.974727 0.990212 0.823548 22549 1 76 0.00428441 157 0 8.22296e+07 0.024916 214726 8.30424e+07 5.31721e+06 22572 4.08734e+07 0 0.151178 0.990212 0.815488 8.22296e+07 0.0049571 1.77357e+07 6.22546e+06 1.79249e+07 174 1.78985e+07 1.51053e+07 0.00462001 1.79383e+07 50.0554 0.00258574 0.992416 0 50.2653 GTEX-13O21-0626-SM-5IJDI 1 B1 6 pieces; squamous mucosa is ~0.5mm, ~10% thickness 8.2 Esophagus Esophagus - Mucosa 0006920 162 564 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990027 235325 0.977222 0.992779 0.832585 22061 1 76 0.0020891 141 0 6.50265e+07 0.0225372 251307 6.54995e+07 8.29828e+06 22076 3.23445e+07 0 0.144637 0.992779 0.826573 6.50265e+07 0.00375052 1.4573e+07 8.0468e+06 1.45962e+07 149 1.45795e+07 1.28287e+07 0.00291751 1.47656e+07 50.3171 0.00383678 0.995531 0 50.0397 GTEX-13O21-0726-SM-5L3EG 1 B1 6 pieces, all muscularis, focal adherent fat/serosa, delineated 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 164 562 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988512 157094 0.976063 0.99222 0.833783 21468 1 76 0.00305352 124 0 5.75847e+07 0.0236456 288900 5.80363e+07 5.82231e+06 21481 2.86286e+07 0 0.14228 0.99222 0.827296 5.75847e+07 0.00395947 1.24177e+07 5.11382e+06 1.24953e+07 130 1.25004e+07 1.05997e+07 0.0035048 1.26055e+07 50.2093 0.00497792 0.995928 0 50.1558 GTEX-13O21-0826-SM-5J2NU 1 B1 6 pieces, one with adherent fat/serosa, delineated 7.9 Esophagus Esophagus - Muscularis 0004648 172 554 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985764 163611 0.979028 0.989651 0.85731 21992 1 76 0.00419452 169 0 7.88906e+07 0.0206395 442183 7.97155e+07 4.16314e+06 22004 3.91861e+07 0 0.121718 0.989651 0.848438 7.88906e+07 0.00580825 1.68877e+07 6.65022e+06 1.70408e+07 170 1.70751e+07 1.5126e+07 0.00499821 1.71281e+07 50.0775 0.00554701 0.993538 0 50.2256 GTEX-13O21-0926-SM-5IFGT 1 B1 6 pieces, excellent speicmen,well preserved mucosa up to 1mm thick, ~70% thickness 6 Stomach Stomach 0000945 169 557 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.983313 244879 0.978213 0.98658 0.842347 22214 1 76 0.00232806 293 0 8.08686e+07 0.0215523 732002 8.19687e+07 9.39554e+06 22230 4.02105e+07 0 0.135866 0.98658 0.831042 8.08686e+07 0.00396901 1.83065e+07 8.02523e+07 1.87903e+07 225 1.8805e+07 1.93248e+07 0.00314582 1.8551e+07 49.6599 0.00893026 0.989846 0 50.6521 GTEX-13O21-1026-SM-5IJDU 1 B1 6 pieces, 10% lymphoid aggregates, delineated, best for LCM or TMA studies 6.4 Small Intestine Small Intestine - Terminal Ileum 0001211 177 549 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989791 213442 0.97003 0.991964 0.790045 24655 1 76 0.00238727 163 0 7.62842e+07 0.0293896 514908 7.69022e+07 9.35163e+06 24689 3.79517e+07 0 0.179984 0.991964 0.783697 7.62842e+07 0.00390161 1.68538e+07 8.95366e+06 1.68402e+07 189 1.67739e+07 1.09921e+07 0.00314278 1.70757e+07 50.4459 0.00669562 0.994138 0 49.9799 GTEX-13O21-1126-SM-5N9EV 1 B1 2 pieces, mainly stromal elements; a few well-preserved glands 5.7 Prostate Prostate 0002367 194 532 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987243 348500 0.96525 0.988611 0.751498 26043 1 76 0.00409434 272 0 1.03428e+08 0.0345278 762092 1.04619e+08 4.75899e+06 26087 5.13934e+07 0 0.213752 0.988611 0.742939 1.03428e+08 0.0040692 2.26237e+07 1.13275e+07 2.26578e+07 293 2.26026e+07 1.37318e+07 0.00408179 2.2818e+07 50.2371 0.00728444 0.989978 0 50.0377 GTEX-13O21-1226-SM-5J2MK 1 B1 2 pieces spermatogenesis present 6.5 Testis Testis 0000473 199 527 BP-46925 RNA Extraction from Paxgene-derived Lysate Plate Based 12/10/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.98272 341142 0.929772 0.98691 0.712456 34070 1 76 0.00442447 171 0 9.4764e+07 0.0699453 879929 9.60209e+07 5.08953e+06 34143 4.70297e+07 0 0.217316 0.98691 0.70313 9.4764e+07 0.00611169 1.96984e+07 1.30619e+07 1.98034e+07 173 1.99363e+07 1.41156e+07 0.0052645 1.9915e+07 49.9733 0.00916393 0.991101 0 50.1329 GTEX-13O21-1426-SM-5K7XI 0 B1 6 pieces, adherent fat up to 3mm thick, delineated, squamous epithelium is ~50-60 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 222 504 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989296 145204 0.973963 0.992125 0.807579 23015 1 76 0.00275201 158 0 6.12903e+07 0.025837 566669 6.17768e+07 1.02318e+07 23034 3.04827e+07 0 0.166383 0.992125 0.801219 6.12903e+07 0.00435163 1.35077e+07 7.16169e+06 1.34683e+07 153 1.34435e+07 9.32968e+06 0.00354954 1.36983e+07 50.4695 0.00917284 0.994954 0 49.927 GTEX-13O21-1526-SM-5K7W4 0 B1 2 pieces, 10-15% fascia, delineated (rep) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 214 512 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987716 205938 0.974948 0.989931 0.776522 23810 1 76 0.00430779 170 0 8.84674e+07 0.0247587 258336 8.93672e+07 5.61965e+06 23848 4.39787e+07 0 0.198425 0.989931 0.768704 8.84674e+07 0.00491881 1.94172e+07 7.96078e+06 1.95634e+07 183 1.95975e+07 1.53689e+07 0.00461262 1.9575e+07 49.9713 0.00289072 0.992146 0 50.1875 GTEX-13O21-1726-SM-5MR5A 0 B1 2 pieces, ~10% interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 224 502 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.994742 182665 0.981236 0.995143 0.863214 20641 1 76 0.00257796 210 0 8.14903e+07 0.0185364 749202 8.18881e+07 3.16292e+06 20653 4.06437e+07 0 0.118022 0.995143 0.859021 8.14903e+07 0.0025673 1.79295e+07 1.05316e+07 1.80604e+07 237 1.79699e+07 1.58549e+07 0.00257264 1.8055e+07 50.118 0.0091491 0.995543 0 50.1818 GTEX-13O21-1826-SM-5MR5M 0 B1 2 pieces, good specimens, trace nubbin adherent fat, 0.5mm thick 6.9 Nerve Nerve - Tibial 0001323 218 508 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992303 157374 0.969581 0.992743 0.758063 23882 1 76 0.00275867 185 0 7.80509e+07 0.0301494 196683 7.86214e+07 2.95788e+06 23919 3.88896e+07 0 0.211518 0.992743 0.752562 7.80509e+07 0.00286486 1.7198e+07 6.39004e+06 1.72254e+07 176 1.71633e+07 1.24383e+07 0.00281174 1.72959e+07 50.1924 0.00250165 0.993183 0 50.0398 GTEX-13O21-1926-SM-5MR39 1 B1 2 pieces, ~90& glandular parenchyma, delineated 7.6 Salivary Gland Minor Salivary Gland 0006330 220 506 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991377 213743 0.972238 0.991871 0.771169 25260 1 76 0.00287952 280 0 1.01673e+08 0.0268729 327470 1.02507e+08 3.6674e+06 25302 5.06501e+07 0 0.201069 0.991871 0.7649 1.01673e+08 0.0028827 2.28282e+07 1.44429e+07 2.27878e+07 272 2.2729e+07 1.67386e+07 0.00288111 2.29344e+07 50.2249 0.00319462 0.992365 0 49.9558 GTEX-13O21-2226-SM-5MR3L 1 B1 2 pieces, mild nodular goitre, trace adhrent fat, ~0.5mm thick, 6.7 Thyroid Thyroid 0002046 148 578 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991957 168883 0.96794 0.992387 0.747622 24427 1 76 0.00274283 199 0 8.79668e+07 0.0318049 317942 8.86416e+07 3.21323e+06 24469 4.38502e+07 0 0.220318 0.992387 0.741931 8.79668e+07 0.00280477 1.92942e+07 8.28659e+06 1.93977e+07 203 1.93313e+07 1.33922e+07 0.00277379 1.94005e+07 50.0892 0.00358683 0.992818 0 50.1338 GTEX-13O21-2326-SM-5MR3X 1 B1 2 pieces, minimal interstitial fibrosis 7.4 Heart Heart - Left Ventricle 0006566 151 575 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992517 137176 0.987046 0.992934 0.850702 19545 1 76 0.00270426 196 0 7.52038e+07 0.012727 1.48392e+06 7.57389e+07 2.84679e+06 19556 3.75138e+07 0 0.136343 0.992934 0.844692 7.52038e+07 0.00268822 1.64264e+07 2.58248e+07 1.64282e+07 231 1.62863e+07 1.17156e+07 0.00269624 1.662e+07 50.5072 0.0195926 0.993352 0 50.0026 GTEX-13O21-2426-SM-5MR4A 1 B1 6 pieces, well presreved mucosa up to ~0.5mm thick 6.4 Colon Colon - Transverse 0001157 168 558 BP-46529 RNA Extraction from Paxgene-derived Lysate Plate Based 12/04/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991695 188835 0.97284 0.99236 0.801724 22686 1 76 0.0029382 210 0 7.93053e+07 0.0267316 1.30768e+06 7.99159e+07 3.19881e+06 22711 3.9518e+07 0 0.171116 0.99236 0.795598 7.93053e+07 0.00311687 1.75577e+07 1.15612e+07 1.78501e+07 218 1.77046e+07 1.02218e+07 0.00302748 1.7751e+07 50.0653 0.0163632 0.993024 0 50.4128 GTEX-13O21-2526-SM-5J1OZ 0 B1 2 pieces, no adherent fat 8.3 Blood Vessel Artery - Tibial 0007610 221 505 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987682 228288 0.975465 0.989515 0.846411 22005 1 76 0.00384286 171 0 8.57216e+07 0.0241144 294526 8.66299e+07 5.00179e+06 22025 4.25841e+07 0 0.129054 0.989515 0.837537 8.57216e+07 0.00471638 1.82752e+07 5.98724e+06 1.8414e+07 193 1.83845e+07 1.70452e+07 0.00427882 1.84569e+07 50.0982 0.00339982 0.991348 0 50.1892 GTEX-13O21-2926-SM-5J1OU 1 B1 2 pieces, ~50-60% occlusive atherosis, rep delineated, both sections with rims of adherent fat, up to ~0.8 mm 7 Blood Vessel Artery - Coronary 0001621 145 581 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987759 266759 0.976163 0.989925 0.838556 23371 1 76 0.00390978 172 0 8.63855e+07 0.0234812 271412 8.72647e+07 4.86732e+06 23395 4.29231e+07 0 0.137608 0.989925 0.830108 8.63855e+07 0.0048544 1.86912e+07 6.02937e+06 1.88356e+07 190 1.88218e+07 1.70798e+07 0.00438106 1.8885e+07 50.0838 0.00311022 0.992092 0 50.1924 GTEX-13O21-3026-SM-5J2NI 1 B1 2 pieces, minimal congestion; rep small bronchioles with well preserved mucosa encircled 6.2 Lung Lung 0008952 163 563 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983262 261025 0.973487 0.987516 0.803357 24661 1 76 0.00445025 207 0 9.47764e+07 0.026246 428997 9.59746e+07 5.58245e+06 24705 4.7023e+07 0 0.170129 0.987516 0.793328 9.47764e+07 0.0062257 2.08953e+07 9.1709e+06 2.11688e+07 209 2.12223e+07 1.59377e+07 0.00533415 2.12224e+07 50.0001 0.0044699 0.991769 0 50.3251 GTEX-13O21-3126-SM-5J1OI 1 B1 2 pieces, ~5% fascia, delineated 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 165 561 BP-46680 RNA Extraction from Paxgene-derived Lysate Plate Based 12/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988227 160770 0.978221 0.990257 0.832109 21776 1 76 0.00395063 128 0 6.08257e+07 0.0214927 299987 6.14241e+07 3.43436e+06 21791 3.02418e+07 0 0.146112 0.990257 0.824002 6.08257e+07 0.00475231 1.33655e+07 5.17079e+06 1.34553e+07 142 1.34484e+07 1.08286e+07 0.00435065 1.3491e+07 50.079 0.00488386 0.992287 0 50.1674 GTEX-13O21-5028-SM-AN3ZD B1 Heart Heart - Left Ventricle 0006566 156 ChIP-Seq GTEX-13O3O-0003-SM-5CV8I C1 Blood Whole Blood 0013756 661 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O3O-0003-SM-5HJQ9_1 C1 Blood Whole Blood 0013756 661 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13O3O-0003-SM-6WSCO C1 Blood Whole Blood 0013756 661 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13O3O-0011-R10a-SM-5LUA9 C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 679 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989861 518905 0.957053 0.992177 0.843405 22681 1 76 0.00437603 188 0 6.95779e+07 0.0427106 3.54819e+06 7.01265e+07 5.93797e+06 22695 3.45807e+07 0 0.113648 0.992177 0.836807 6.95779e+07 0.00384909 1.51112e+07 1.42853e+07 1.52966e+07 212 1.51759e+07 7.13894e+06 0.00411318 1.53912e+07 50.3521 0.050597 0.994492 0 50.3048 GTEX-13O3O-0011-R10a-SM-AHZMQ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 679 ChIP-Seq GTEX-13O3O-0011-R11b-SM-5KM4G C1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 679 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989173 401844 0.949579 0.990971 0.74621 23240 1 76 0.00325065 154 0 7.71942e+07 0.0499755 1.03639e+06 7.78976e+07 4.96044e+06 23272 3.84055e+07 0 0.203369 0.990971 0.739472 7.71942e+07 0.00396806 1.67156e+07 1.24902e+07 1.67896e+07 193 1.68284e+07 9.58528e+06 0.0036087 1.68087e+07 49.9707 0.0133046 0.992769 0 50.1105 GTEX-13O3O-0011-R1b-SM-5KM2K C1, A1 6.9 Brain Brain - Hippocampus 0001954 679 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989568 557287 0.953152 0.991553 0.838409 22686 1 76 0.00300613 201 0 7.22298e+07 0.0465727 2.91777e+06 7.28451e+07 4.57628e+06 22697 3.59243e+07 0 0.114743 0.991553 0.831328 7.22298e+07 0.00412831 1.56871e+07 1.79341e+07 1.58309e+07 230 1.57548e+07 7.21452e+06 0.0035661 1.5912e+07 50.2482 0.0400545 0.993539 0 50.2282 GTEX-13O3O-0011-R2b-SM-5P9H1 C1, A1 6.7 Brain Brain - Substantia nigra 0002038 679 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990931 510052 0.962082 0.991328 0.819823 23879 1 76 0.00279546 378 0 1.10376e+08 0.0376886 8.76832e+06 1.11341e+08 3.60097e+06 23898 5.4959e+07 0 0.14226 0.991328 0.812713 1.10376e+08 0.00344012 2.37678e+07 3.59677e+07 2.44439e+07 365 2.39529e+07 1.05026e+07 0.00311766 2.42912e+07 50.3506 0.0787518 0.991725 0 50.7012 GTEX-13O3O-0011-R3b-SM-5KM3R C1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 679 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989728 562273 0.954039 0.991574 0.823832 22952 1 76 0.00305078 196 0 7.29875e+07 0.0456645 4.04206e+06 7.36077e+07 4.83969e+06 22966 3.63325e+07 0 0.130207 0.991574 0.81689 7.29875e+07 0.00380392 1.57655e+07 2.30231e+07 1.59981e+07 254 1.5913e+07 7.16436e+06 0.00342665 1.59801e+07 50.1052 0.0549136 0.99342 0 50.3662 GTEX-13O3O-0011-R4b-SM-5KM3F C1, A1 7 Brain Brain - Amygdala 0001876 679 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990359 753475 0.945789 0.991992 0.816569 22869 1 76 0.00302643 199 0 7.36203e+07 0.0538997 4.74018e+06 7.42146e+07 4.59526e+06 22885 3.66532e+07 0 0.12922 0.991992 0.81003 7.36203e+07 0.00378953 1.58454e+07 3.05263e+07 1.60354e+07 246 1.5979e+07 7.58682e+06 0.00340735 1.6021e+07 50.0656 0.0638713 0.993625 0 50.298 GTEX-13O3O-0011-R5b-SM-5KM44 C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 679 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990001 724204 0.950022 0.991834 0.797442 23883 1 76 0.00308746 268 0 8.7044e+07 0.0497024 4.14676e+06 8.77606e+07 5.99035e+06 23901 4.3322e+07 0 0.15258 0.991834 0.79093 8.7044e+07 0.00384525 1.86969e+07 2.94097e+07 1.89098e+07 281 1.88491e+07 8.50162e+06 0.00346565 1.8918e+07 50.0913 0.0472508 0.993668 0 50.2832 GTEX-13O3O-0011-R6b-SM-5P9GY C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 679 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991477 1.25265e+06 0.940694 0.991817 0.782229 25354 1 76 0.00288817 372 0 1.14017e+08 0.0589806 5.70772e+06 1.14958e+08 3.77886e+06 25376 5.67584e+07 0 0.158464 0.991817 0.775828 1.14017e+08 0.00349308 2.41356e+07 4.90547e+07 2.46201e+07 343 2.44725e+07 1.19414e+07 0.00319052 2.43452e+07 49.8696 0.0496504 0.992156 0 50.4969 GTEX-13O3O-0011-R7b-SM-5P9GZ C1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 679 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990335 1.41705e+06 0.940774 0.990926 0.78439 24340 1 76 0.00280861 373 0 1.16755e+08 0.0589696 6.99667e+06 1.17824e+08 3.82464e+06 24358 5.81565e+07 0 0.156384 0.990926 0.777272 1.16755e+08 0.0033887 2.43701e+07 6.79282e+07 2.52142e+07 341 2.49438e+07 1.05152e+07 0.00309848 2.47197e+07 49.7744 0.0593824 0.991516 0 50.8512 GTEX-13O3O-0011-R8b-SM-5LUAL C1, A1 5.7 Brain Brain - Hypothalamus 0001898 679 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990515 533370 0.951254 0.992393 0.813548 24251 1 76 0.00440664 200 0 7.23954e+07 0.0485219 4.87485e+06 7.29503e+07 5.6103e+06 24274 3.60014e+07 0 0.137706 0.992393 0.807358 7.23954e+07 0.00360602 1.5689e+07 2.09173e+07 1.58753e+07 224 1.56887e+07 6.14545e+06 0.00400709 1.60161e+07 50.5164 0.0668242 0.99427 0 50.2951 GTEX-13O3O-0126-SM-5KM4E 0 C1 6 pieces; well dissected; 10% intradermal fat 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 778 925 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.988527 173912 0.975558 0.990787 0.824974 22277 1 76 0.00327241 161 0 6.37867e+07 0.0241383 313591 6.43799e+07 4.04909e+06 22293 3.17337e+07 0 0.150584 0.990787 0.817374 6.37867e+07 0.00421515 1.39101e+07 7.23889e+06 1.40073e+07 145 1.40204e+07 1.16673e+07 0.00374271 1.40323e+07 50.0214 0.00487095 0.993046 0 50.1742 GTEX-13O3O-0126-SM-E9J49 0 C1 6 pieces; well dissected; 10% intradermal fat 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 778 925 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.982434 342602 0.968813 0.983424 0.741857 24516 1 76 0.00194477 220 0 9.01088e+07 0.0309738 554830 9.16276e+07 4.84848e+06 24565 4.48725e+07 0 0.226956 0.983424 0.72956 9.01088e+07 0.00286138 1.97314e+07 9.0098e+06 1.98906e+07 223 1.98228e+07 1.29933e+07 0.00240261 1.9889e+07 50.0834 0.00605527 0.984414 0 50.2009 GTEX-13O3O-0326-SM-5K7W2 0 C1 2 pieces; 10% external & internal fat 6.6 Nerve Nerve - Tibial 0001323 795 909 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986092 207491 0.964666 0.988232 0.735906 24871 1 76 0.00438416 183 0 9.10015e+07 0.0350685 320859 9.20852e+07 5.91772e+06 24917 4.52045e+07 0 0.22876 0.988232 0.727246 9.10015e+07 0.00497607 1.99433e+07 8.24816e+06 2.00256e+07 194 2.00289e+07 1.3094e+07 0.00467947 2.01293e+07 50.1249 0.00348437 0.990373 0 50.103 GTEX-13O3O-0426-SM-5KM2Y 0 C1 2 pieces; no lesions; well trimmed 8 Blood Vessel Artery - Tibial 0007610 800 904 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988523 149466 0.972583 0.990313 0.800235 22252 1 76 0.00312653 208 0 8.5851e+07 0.0270361 295746 8.66908e+07 5.36847e+06 22283 4.27143e+07 0 0.172347 0.990313 0.792484 8.5851e+07 0.0039275 1.84247e+07 6.60592e+06 1.85722e+07 207 1.85888e+07 1.53131e+07 0.00352629 1.85541e+07 49.9533 0.0034115 0.992104 0 50.1994 GTEX-13O3O-0526-SM-5J1NL 0 C1 2 pieces; <10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 806 899 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990122 246934 0.983715 0.991945 0.874045 19653 1 76 0.00367014 158 0 8.3172e+07 0.0160554 700892 8.38474e+07 4.42452e+06 19661 4.13975e+07 0 0.10967 0.991945 0.867004 8.3172e+07 0.00437723 1.8106e+07 8.52894e+06 1.82167e+07 183 1.81912e+07 1.80389e+07 0.00402303 1.82741e+07 50.1136 0.00835914 0.993767 0 50.1524 GTEX-13O3O-0726-SM-5J1N7 1 C1 2 pieces; pulmonary edema & early bronchopneumonia 7.3 Lung Lung 0008952 833 873 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984713 247660 0.969806 0.986587 0.714821 23854 1 76 0.00444578 143 0 7.86098e+07 0.0297462 226475 7.96785e+07 4.80224e+06 23900 3.8987e+07 0 0.254986 0.986587 0.705233 7.86098e+07 0.00534626 1.72874e+07 9.04612e+06 1.73668e+07 155 1.7375e+07 1.14528e+07 0.00489517 1.74222e+07 50.0677 0.00284236 0.988461 0 50.1145 GTEX-13O3O-0726-SM-CYKVH 1 C1 2 pieces; pulmonary edema & early bronchopneumonia 7.9 Lung Lung 0008952 833 873 BP-68724 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2015 RIP-Seq GTEX-13O3O-0826-SM-5K7WE 1 C1 2 pieces; adipose tissue with rare mammary duct 6.2 Breast Breast - Mammary Tissue 0008367 835 872 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985268 271312 0.978146 0.987596 0.791557 24423 1 76 0.00439749 207 0 9.9093e+07 0.0213494 332695 1.00338e+08 6.64900e+06 24456 4.91917e+07 0 0.186589 0.987596 0.781739 9.9093e+07 0.00522739 2.18538e+07 1.15956e+07 2.19991e+07 217 2.20194e+07 1.79247e+07 0.00481146 2.20646e+07 50.0512 0.00331576 0.989924 0 50.1656 GTEX-13O3O-0926-SM-5KM1F 2 C1 2 pieces; 1.5 mm focus of atrophy & fibrosis 6.8 Thyroid Thyroid 0002046 837 870 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98491 307204 0.965704 0.987796 0.699369 24268 1 76 0.00404048 134 0 7.44054e+07 0.0340408 140440 7.53247e+07 3.63942e+06 24306 3.6929e+07 0 0.266336 0.987796 0.690834 7.44054e+07 0.00540941 1.62739e+07 8.86194e+06 1.63525e+07 150 1.64122e+07 9.85939e+06 0.00472295 1.64214e+07 50.014 0.00186446 0.990683 0 50.1205 GTEX-13O3O-1126-SM-5KM4Q 1 C1 6 pieces; no plaques 6.6 Blood Vessel Artery - Aorta 0001496 839 870 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988155 228829 0.97179 0.990189 0.788119 22064 1 76 0.0032826 130 0 6.37851e+07 0.0278282 110151 6.44171e+07 4.05546e+06 22082 3.16997e+07 0 0.183671 0.990189 0.780387 6.37851e+07 0.0043592 1.36828e+07 5.63738e+06 1.37958e+07 137 1.37998e+07 1.16156e+07 0.00381979 1.38077e+07 50.0144 0.00170997 0.992223 0 50.2056 GTEX-13O3O-1426-SM-5KM2S 1 C1 2 pieces; 50 & 80% fat 6.3 Heart Heart - Atrial Appendage 0006631 846 865 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989276 155277 0.975625 0.991152 0.809506 22344 1 76 0.00307876 190 0 7.87595e+07 0.0241562 1.16787e+06 7.94626e+07 5.04056e+06 22367 3.91825e+07 0 0.166119 0.991152 0.802343 7.87595e+07 0.00412181 1.71515e+07 9.24228e+06 1.7257e+07 209 1.72243e+07 1.06855e+07 0.0035993 1.73192e+07 50.1373 0.0146971 0.993029 0 50.1534 GTEX-13O3O-1526-SM-5KM1C 1 C1 2 pieces 6.9 Heart Heart - Left Ventricle 0006566 849 862 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986682 140635 0.983849 0.989251 0.842446 19186 1 76 0.00356349 265 0 7.97391e+07 0.0160375 2.81023e+06 8.06055e+07 3.86994e+06 19194 3.96709e+07 0 0.141403 0.989251 0.833391 7.97391e+07 0.00465561 1.72515e+07 2.903e+07 1.74573e+07 273 1.73933e+07 8.52446e+06 0.00410813 1.74851e+07 50.1316 0.034864 0.991821 0 50.2965 GTEX-13O3O-1526-SM-CYKUS 1 C1 2 pieces 6.9 Heart Heart - Left Ventricle 0006566 849 862 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 RIP-Seq GTEX-13O3O-1626-SM-5KM1O 2 C1 2 pieces; 1 piece is 40% external fat 6.5 Adrenal Gland Adrenal Gland 0002369 852 860 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986317 203332 0.968891 0.989244 0.802209 20931 1 76 0.00386883 130 0 6.09759e+07 0.0309192 1.77139e+06 6.16389e+07 2.83909e+06 20949 3.02997e+07 0 0.166682 0.989244 0.793581 6.09759e+07 0.00512748 1.31039e+07 8.72461e+06 1.33285e+07 156 1.33012e+07 6.63744e+06 0.00449629 1.32916e+07 49.982 0.0287382 0.992171 0 50.4249 GTEX-13O3O-1826-SM-5IFGW 2 C1 2 fragmented pieces; 20% of each consists of large vessels & nerves [outlined] 6.5 Liver Liver 0001114 857 856 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.98155 382563 0.971453 0.985651 0.826458 19627 1 76 0.00230675 192 0 7.06853e+07 0.0284029 945343 7.17144e+07 7.76322e+06 19638 3.50648e+07 0 0.144996 0.985651 0.814599 7.06853e+07 0.00414352 1.56208e+07 1.90748e+07 1.54738e+07 223 1.54163e+07 7.38385e+06 0.00322131 1.59566e+07 50.8611 0.0131821 0.989751 0 49.7635 GTEX-13O3O-2326-SM-5IJD6 0 C1 6 pieces; 2 to 4 hair follicles per piece; well trimmed 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 863 852 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988964 217769 0.976125 0.991595 0.75854 24212 1 76 0.00238901 222 0 9.14564e+07 0.0235555 274977 9.22316e+07 1.2002e+07 24256 4.54975e+07 0 0.217586 0.991595 0.752165 9.14564e+07 0.00388583 2.02012e+07 1.11882e+07 2.02425e+07 231 2.02937e+07 1.54359e+07 0.00313543 2.03807e+07 50.107 0.00298138 0.994227 0 50.051 GTEX-13O3O-2526-SM-5L3DR 3 C1 4 pieces; mucosa autolyzed; muscularis intact 6.3 Colon Colon - Transverse 0001157 870 846 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.982821 249728 0.967779 0.987286 0.781173 23586 1 76 0.003338 129 0 5.97128e+07 0.0315138 251829 6.04818e+07 6.00836e+06 23619 2.96133e+07 0 0.186606 0.987286 0.771241 5.97128e+07 0.00467463 1.30443e+07 8.87579e+06 1.30584e+07 144 1.3118e+07 8.84463e+06 0.00400329 1.32355e+07 50.223 0.00416372 0.991751 0 50.0269 GTEX-13O3O-2726-SM-5KM35 0 C1 2 pieces;atrophic 5.9 Ovary Ovary 0000992 877 840 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986745 354269 0.955105 0.988915 0.69463 24676 1 76 0.00334958 203 0 1.00705e+08 0.0446823 121952 1.01834e+08 6.42262e+06 24734 5.0035e+07 0 0.260474 0.988915 0.68693 1.00705e+08 0.0044043 2.17302e+07 1.66939e+07 2.19333e+07 212 2.19294e+07 1.44368e+07 0.00387579 2.19558e+07 50.0301 0.00119756 0.991085 0 50.2325 GTEX-13O3O-3026-SM-5KM42 1 C1 4 pieces; 7.1 Brain Brain - Cerebellum 0002037 886 833 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989139 453029 0.944517 0.99085 0.712674 23817 1 76 0.00334402 155 0 8.22753e+07 0.0551498 1.12879e+06 8.30351e+07 5.16634e+06 23847 4.09288e+07 0 0.231843 0.99085 0.706153 8.22753e+07 0.00418013 1.77257e+07 1.85902e+07 1.79136e+07 189 1.79176e+07 9.43692e+06 0.00376135 1.78547e+07 49.9121 0.0135942 0.992561 0 50.2637 GTEX-13O3O-3126-SM-5KM3H 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 889 830 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990621 337476 0.95912 0.992474 0.820671 22845 1 76 0.00314357 197 0 7.00795e+07 0.0405913 2.93381e+06 7.06109e+07 4.71875e+06 22858 3.48828e+07 0 0.138449 0.992474 0.814494 7.00795e+07 0.0038874 1.521e+07 1.82643e+07 1.54106e+07 219 1.53674e+07 7.21885e+06 0.00351479 1.53764e+07 50.0146 0.0415489 0.994327 0 50.3275 GTEX-13O3O-3126-SM-CYKUY 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 889 830 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 RIP-Seq GTEX-13O3P-0003-SM-5GYAO C1 Blood Whole Blood 0013756 434 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O3P-0003-SM-5HJPJ C1 Blood Whole Blood 0013756 434 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13O3P-0003-SM-6WSAJ C1 Blood Whole Blood 0013756 434 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 11/08/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13O3P-0126-SM-5KM4S 0 C1 6 pieces; well trimmed; 10% intradermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 405 1239 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988756 201287 0.972308 0.990758 0.781564 23132 1 76 0.00323494 176 0 7.50553e+07 0.0274711 500191 7.57555e+07 4.75996e+06 23163 3.73366e+07 0 0.190743 0.990758 0.774341 7.50553e+07 0.00419384 1.63885e+07 7.93715e+06 1.64794e+07 167 1.64883e+07 1.2438e+07 0.00371342 1.65247e+07 50.0551 0.0066027 0.99276 0 50.1384 GTEX-13O3P-0226-SM-5KM3Z 0 C1 2 pieces; 6 Adipose Tissue Adipose - Subcutaneous 0002190 441 1203 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987487 219119 0.975339 0.989465 0.803096 21811 1 76 0.00318895 142 0 6.69558e+07 0.0243923 537439 6.76687e+07 4.33451e+06 21831 3.32959e+07 0 0.172242 0.989465 0.794636 6.69558e+07 0.00424178 1.47248e+07 6.73777e+06 1.48373e+07 157 1.4834e+07 1.08857e+07 0.00371431 1.48577e+07 50.0399 0.00794221 0.991444 0 50.1903 GTEX-13O3P-0326-SM-5K7VM 1 C1 2 pieces; 20 & 10% external fat 7.1 Nerve Nerve - Tibial 0001323 446 1199 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984862 205264 0.972326 0.987039 0.748575 23777 1 76 0.00442866 187 0 8.90374e+07 0.0273989 360410 9.02066e+07 5.84422e+06 23819 4.42426e+07 0 0.223751 0.987039 0.738873 8.90374e+07 0.00497028 1.95793e+07 8.04949e+06 1.97076e+07 184 1.97327e+07 1.43629e+07 0.00469887 1.97442e+07 50.0145 0.00399538 0.989215 0 50.1634 GTEX-13O3P-0526-SM-5K7UT 1 C1 2 pieces; no plaques 8 Blood Vessel Artery - Tibial 0007610 450 1196 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987353 135741 0.977697 0.98959 0.840199 21093 1 76 0.00430562 167 0 8.74105e+07 0.021941 646421 8.83301e+07 6.06869e+06 21110 4.34542e+07 0 0.137498 0.98959 0.831452 8.74105e+07 0.004747 1.882e+07 6.66735e+06 1.89341e+07 192 1.89441e+07 1.75028e+07 0.00452581 1.89993e+07 50.0728 0.00731824 0.991826 0 50.1511 GTEX-13O3P-0626-SM-5L3D5 1 C1 2 pieces; 10% internal fat on 1, 10% external fat on other 8.2 Muscle Muscle - Skeletal 0011907 453 1193 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98946 219858 0.983689 0.993176 0.859498 19338 1 76 0.00276514 208 0 8.33951e+07 0.0160825 1.80732e+06 8.39681e+07 8.17913e+06 19346 4.14781e+07 0 0.124191 0.993176 0.853633 8.33951e+07 0.00362616 1.85538e+07 1.12913e+07 1.84211e+07 243 1.84278e+07 1.51254e+07 0.00319404 1.88271e+07 50.5359 0.0215238 0.996891 0 49.8206 GTEX-13O3P-0726-SM-5J2OM 1 C1 2 pieces 5.9 Thyroid Thyroid 0002046 459 1188 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981387 256258 0.964673 0.985704 0.683177 24551 1 76 0.00448606 133 0 8.26644e+07 0.0350456 376023 8.38633e+07 4.66451e+06 24603 4.09757e+07 0 0.281496 0.985704 0.673411 8.26644e+07 0.00628348 1.81066e+07 9.90936e+06 1.81198e+07 152 1.82304e+07 1.07351e+07 0.00538083 1.83356e+07 50.1438 0.00448376 0.990022 0 50.0182 GTEX-13O3P-0826-SM-5L3DH 1 C1 2 pieces; ductal proliferation and fibrosis consistent with liver cirrhosis 6.8 Breast Breast - Mammary Tissue 0008367 461 1186 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987823 194653 0.973763 0.991432 0.740099 23810 1 76 0.00323067 139 0 7.44287e+07 0.0259431 275885 7.5072e+07 7.17539e+06 23845 3.69862e+07 0 0.233664 0.991432 0.733757 7.44287e+07 0.00394121 1.64882e+07 8.05697e+06 1.65207e+07 149 1.6602e+07 1.26763e+07 0.00358464 1.66568e+07 50.0824 0.00367494 0.99504 0 50.0493 GTEX-13O3P-0926-SM-5IFFI 0 C1 2 pieces; foci of lymphoid cells; large blood vessel in 1 piece (10%) 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 463 1185 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988569 295488 0.967995 0.991182 0.749788 24833 1 76 0.00262029 166 0 8.68304e+07 0.03125 336614 8.7603e+07 9.6664e+06 24866 4.31624e+07 0 0.218207 0.991182 0.743176 8.68304e+07 0.00392825 1.90528e+07 1.1189e+07 1.9158e+07 198 1.92043e+07 1.4159e+07 0.00327255 1.92284e+07 50.0313 0.0038425 0.993794 0 50.1376 GTEX-13O3P-1026-SM-5N9E7 1 C1 2 pieces; 1 piece with large bronchus [10%] outlined 5.7 Lung Lung 0008952 470 1178 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986552 370962 0.973671 0.988192 0.757829 24864 1 76 0.00431915 275 0 1.10111e+08 0.0259842 757734 1.11427e+08 5.49992e+06 24908 5.46625e+07 0 0.215842 0.988192 0.74888 1.10111e+08 0.00445241 2.4395e+07 1.75626e+07 2.45475e+07 274 2.45157e+07 1.79136e+07 0.00438567 2.4608e+07 50.094 0.00680029 0.989831 0 50.1557 GTEX-13O3P-1126-SM-5L3FG 1 C1 6 pieces; linear plaques; tributary in 2 pieces 5.9 Blood Vessel Artery - Aorta 0001496 471 1178 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986435 151815 0.970768 0.990498 0.768778 21397 1 76 0.00331375 120 0 6.08843e+07 0.028935 245637 6.14684e+07 6.28013e+06 21412 3.02233e+07 0 0.20199 0.990498 0.761473 6.08843e+07 0.00437106 1.31939e+07 6.24075e+06 1.32135e+07 129 1.32372e+07 1.03719e+07 0.00384024 1.34e+07 50.3057 0.00399615 0.994561 0 50.0371 GTEX-13O3P-1226-SM-5J2O8 2 C1 6 pieces; largely sloughed glandular mucosa consistent with Barrett esophagus (clinical history) 6.2 Esophagus Esophagus - Mucosa 0006920 474 1175 BP-46978 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 EXCLUDE 0.981444 163244 0.971533 0.985313 0.756312 23885 1 76 0.00452791 121 0 6.58795e+07 0.0279975 206088 6.68615e+07 3.54052e+06 23902 3.26874e+07 0 0.215221 0.985313 0.745204 6.58795e+07 0.00615063 1.43763e+07 7.75844e+06 1.44864e+07 127 1.45449e+07 1.07945e+07 0.00533608 1.45605e+07 50.0269 0.00308231 0.989183 0 50.1908 GTEX-13O3P-1326-SM-5K7Y8 1 C1 6 pieces 6.4 Esophagus Esophagus - Muscularis 0004648 475 1175 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.98943 163811 0.969028 0.992148 0.752729 22024 1 76 0.00277096 125 0 6.22864e+07 0.0307997 853203 6.27793e+07 1.1015e+07 22052 3.09674e+07 0 0.216299 0.992148 0.746818 6.22864e+07 0.00419721 1.35381e+07 6.60983e+06 1.35815e+07 145 1.3571e+07 8.67818e+06 0.00348214 1.37137e+07 50.2615 0.0135905 0.994866 0 50.08 GTEX-13O3P-1426-SM-5L3DT 1 C1 2 pieces; 1 piece has 30% fibrous stroma 7.4 Heart Heart - Atrial Appendage 0006631 477 1173 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98873 209553 0.978999 0.992666 0.8016 20674 1 76 0.00298454 109 0 5.77076e+07 0.0207405 1.41613e+06 5.8134e+07 5.79247e+06 20690 2.86774e+07 0 0.177399 0.992666 0.795721 5.77076e+07 0.00395265 1.23521e+07 6.21026e+06 1.23182e+07 129 1.23868e+07 9.8854e+06 0.00346667 1.24851e+07 50.1976 0.0243597 0.996602 0 49.9313 GTEX-13O3P-1626-SM-5K7X3 1 C1 2 pieces; 1 has 10% internal fat 6.1 Heart Heart - Left Ventricle 0006566 485 1167 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988435 110189 0.985392 0.990966 0.851004 19856 1 76 0.00234979 265 0 8.0348e+07 0.0145263 5.51554e+06 8.10805e+07 1.54355e+07 19861 4.00159e+07 0 0.134387 0.990966 0.843317 8.0348e+07 0.00356581 1.80125e+07 2.65109e+07 1.75444e+07 319 1.75972e+07 6.04164e+06 0.00295625 1.81392e+07 50.7584 0.0680255 0.993497 0 49.3418 GTEX-13O3P-2326-SM-5KM55 3 C1 6 pieces; mucosa autolyzed; muscularis preserved 5.9 Colon Colon - Transverse 0001157 501 1154 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987524 186182 0.973264 0.989586 0.762922 23287 1 76 0.00350411 137 0 6.99664e+07 0.0259165 441430 7.07027e+07 4.59409e+06 23317 3.47645e+07 0 0.210342 0.989586 0.754977 6.99664e+07 0.00445155 1.53228e+07 8.87868e+06 1.54436e+07 152 1.54486e+07 1.08947e+07 0.00397684 1.54559e+07 50.0118 0.00624346 0.991648 0 50.1964 GTEX-13O3P-2726-SM-5KM2R 1 C1 6 pieces; well dissected muscle 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 510 1148 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989064 171199 0.972408 0.990855 0.771121 22787 1 76 0.00334262 165 0 8.36523e+07 0.0273489 772798 8.44243e+07 5.55836e+06 22823 4.16054e+07 0 0.201287 0.990855 0.76407 8.36523e+07 0.00420241 1.81142e+07 7.65166e+06 1.82878e+07 186 1.8284e+07 1.37912e+07 0.00377174 1.82617e+07 49.9694 0.00915373 0.992647 0 50.2384 GTEX-13O3Q-0003-SM-5GYBP B1 Blood Whole Blood 0013756 1051 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O3Q-0003-SM-5HJQV B1 Blood Whole Blood 0013756 1051 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13O3Q-0003-SM-6WSCX B1 Blood Whole Blood 0013756 1051 BP-44566 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13O3Q-0011-R10a-SM-AHZ6Q B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1036 ChIP-Seq GTEX-13O3Q-0011-R10b-SM-5KM39 B1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 1036 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990058 635241 0.953749 0.991942 0.834393 24230 1 76 0.00307912 270 0 9.47355e+07 0.0457882 3.11615e+06 9.55051e+07 6.2946e+06 24248 4.71484e+07 0 0.119356 0.991942 0.827669 9.47355e+07 0.00389605 2.0495e+07 2.27139e+07 2.07477e+07 299 2.07158e+07 1.22115e+07 0.00348681 2.0695e+07 49.9749 0.0326281 0.993826 0 50.3064 GTEX-13O3Q-0011-R11b-SM-5KM2W B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 1036 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987735 580585 0.929928 0.98939 0.693772 24616 1 76 0.00347017 200 0 8.84916e+07 0.0696047 1.12595e+06 8.94405e+07 5.78134e+06 24657 4.40128e+07 0 0.236156 0.98939 0.686411 8.84916e+07 0.00408402 1.87402e+07 2.43481e+07 1.88805e+07 217 1.89217e+07 1.08513e+07 0.00377658 1.8838e+07 49.8891 0.0125889 0.991044 0 50.1864 GTEX-13O3Q-0011-R1b-SM-4W9GN-hHP2a B1, A1 Brain Brain - Hippocampus 0001954 1036 DroNc-seq GTEX-13O3Q-0011-R1b-SM-4W9GN-hHP2b B1, A1 Brain Brain - Hippocampus 0001954 1036 DroNc-seq GTEX-13O3Q-0011-R1b-SM-4W9GN-hHP2c B1, A1 Brain Brain - Hippocampus 0001954 1036 DroNc-seq GTEX-13O3Q-0011-R1b-SM-4W9GN-hHP3b B1, A1 Brain Brain - Hippocampus 0001954 1036 DroNc-seq GTEX-13O3Q-0011-R1b-SM-5KM3L B1, A1 6.8 Brain Brain - Hippocampus 0001954 1036 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988269 1.46550e+06 0.949635 0.990723 0.835743 24942 1 76 0.00308328 377 0 1.51295e+08 0.0501064 1.29983e+07 1.52712e+08 1.01521e+07 24962 7.52567e+07 0 0.113892 0.990723 0.82799 1.51295e+08 0.00403987 3.22787e+07 5.6853e+07 3.34045e+07 395 3.30859e+07 1.38345e+07 0.00356039 3.29435e+07 49.8922 0.0851164 0.993178 0 50.857 GTEX-13O3Q-0011-R2b-SM-5KM3K B1, A1 6.9 Brain Brain - Substantia nigra 0002038 1036 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.99024 367729 0.965317 0.992107 0.85445 23094 1 76 0.00304148 274 0 7.90141e+07 0.0343475 5.93398e+06 7.96427e+07 5.04047e+06 23112 3.93314e+07 0 0.110867 0.992107 0.847706 7.90141e+07 0.00381126 1.74476e+07 1.41991e+07 1.76764e+07 269 1.7602e+07 1.02179e+07 0.00342564 1.76607e+07 50.0832 0.0745076 0.993975 0 50.3257 GTEX-13O3Q-0011-R3a-SM-5P9H3 B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1036 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991259 2.22641e+06 0.948505 0.991674 0.812213 27135 1 76 0.00280459 381 0 2.23265e+08 0.051071 1.37665e+07 2.2514e+08 7.31405e+06 27174 1.11213e+08 0 0.136293 0.991674 0.80545 2.23265e+08 0.00332394 4.76687e+07 9.9488e+07 4.82018e+07 409 4.79329e+07 2.5799e+07 0.00306416 4.80759e+07 50.0744 0.0611463 0.992088 0 50.278 GTEX-13O3Q-0011-R4a-SM-5P9H2 B1, A1 6.7 Brain Brain - Amygdala 0001876 1036 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.989435 1.04775e+06 0.950673 0.989885 0.827436 23781 1 76 0.00288263 375 0 1.01926e+08 0.0490176 6.75380e+06 1.02967e+08 3.38228e+06 23798 5.07146e+07 0 0.123238 0.989885 0.819067 1.01926e+08 0.00358244 2.18449e+07 3.70156e+07 2.23161e+07 360 2.19942e+07 1.11041e+07 0.00323238 2.2227e+07 50.2632 0.065592 0.990336 0 50.5334 GTEX-13O3Q-0011-R5b-SM-5P9H4 B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 1036 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991199 1.46647e+06 0.940229 0.991702 0.776951 26229 1 76 0.00292838 273 0 1.36666e+08 0.0593464 5.7614e+06 1.3781e+08 4.51282e+06 26258 6.80729e+07 0 0.163278 0.991702 0.770503 1.36666e+08 0.00341362 2.90229e+07 6.12669e+07 2.92163e+07 327 2.92313e+07 1.64817e+07 0.00317088 2.90971e+07 49.885 0.0418069 0.992205 0 50.166 GTEX-13O3Q-0011-R6a-SM-5KM2V B1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1036 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989383 594419 0.950577 0.991265 0.822151 23559 1 76 0.00311789 198 0 7.3063e+07 0.0490017 3.53897e+06 7.37069e+07 4.90252e+06 23573 3.63633e+07 0 0.128426 0.991265 0.814969 7.3063e+07 0.00383715 1.58135e+07 1.99317e+07 1.58898e+07 223 1.5897e+07 9.49349e+06 0.00347684 1.59437e+07 50.0733 0.0480141 0.993146 0 50.1203 GTEX-13O3Q-0011-R7a-SM-5KM38 B1, A1 8.5 Brain Brain - Putamen (basal ganglia) 0001874 1036 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990332 664782 0.945235 0.991894 0.811918 22757 1 76 0.00304875 198 0 6.83423e+07 0.0544692 4.46581e+06 6.89008e+07 4.4256e+06 22772 3.40256e+07 0 0.133317 0.991894 0.805337 6.83423e+07 0.00373537 1.46152e+07 2.67561e+07 1.48081e+07 212 1.47089e+07 7.0268e+06 0.00339152 1.48195e+07 50.1873 0.0648151 0.993455 0 50.3278 GTEX-13O3Q-0011-R8b-SM-5KM2J B1, A1 8.7 Brain Brain - Hypothalamus 0001898 1036 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990879 688586 0.953033 0.992594 0.820369 25347 1 76 0.00307856 272 0 9.39951e+07 0.0465604 3.30987e+06 9.46964e+07 6.06031e+06 25371 4.67903e+07 0 0.132664 0.992594 0.814293 9.39951e+07 0.00386995 2.04542e+07 2.21574e+07 2.06563e+07 284 2.0661e+07 1.26805e+07 0.00347357 2.06125e+07 49.9413 0.0349524 0.99431 0 50.2459 GTEX-13O3Q-0126-SM-5KM34 1 B1 6 pieces; well trimmed; <1% intradermal fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1069 776 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987689 167028 0.970915 0.989809 0.751994 23668 1 76 0.00335231 159 0 7.51465e+07 0.0288123 274028 7.59202e+07 4.83856e+06 23697 3.73651e+07 0 0.218921 0.989809 0.74433 7.51465e+07 0.00430217 1.64604e+07 7.80849e+06 1.65431e+07 156 1.65717e+07 1.24482e+07 0.00382622 1.65862e+07 50.0218 0.00360942 0.991929 0 50.1253 GTEX-13O3Q-0326-SM-5L3FE 1 B1 2 pieces; 20 & 5% fat and fibrous tissue 6.6 Heart Heart - Atrial Appendage 0006631 1091 754 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986504 201473 0.974738 0.990911 0.803157 22367 1 76 0.0031169 129 0 6.43168e+07 0.0250512 3.22688e+06 6.49067e+07 6.63872e+06 22380 3.19363e+07 0 0.17158 0.990911 0.795858 6.43168e+07 0.00437249 1.40805e+07 6.4327e+06 1.40744e+07 151 1.41358e+07 1.02368e+07 0.00374191 1.42832e+07 50.2594 0.0497156 0.995318 0 49.9891 GTEX-13O3Q-0526-SM-5KM18 1 B1 2 pieces; emphysema 6.6 Lung Lung 0008952 1098 747 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.983979 155447 0.970943 0.986837 0.693283 23083 1 76 0.00425072 115 0 6.37103e+07 0.0287033 256083 6.45601e+07 3.11550e+06 23115 3.16074e+07 0 0.277661 0.986837 0.684157 6.37103e+07 0.00558561 1.40614e+07 5.78597e+06 1.41152e+07 130 1.41589e+07 8.23761e+06 0.00491623 1.41941e+07 50.0622 0.00396658 0.989695 0 50.0955 GTEX-13O3Q-0626-SM-5IJG1 2 B1 2 pieces; 1 has 20% internal & external fibrofatty tissue [in part outlined] 6.3 Thyroid Thyroid 0002046 1099 746 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985168 263714 0.96454 0.987022 0.759266 25068 1 76 0.00474756 160 0 8.46103e+07 0.0351617 299118 8.57229e+07 5.63278e+06 25104 4.2027e+07 0 0.205274 0.987022 0.749412 8.46103e+07 0.00517161 1.84618e+07 1.06581e+07 1.86106e+07 172 1.86517e+07 1.31809e+07 0.00495919 1.85779e+07 49.9008 0.00348936 0.988875 0 50.2008 GTEX-13O3Q-0826-SM-5IFGF 1 B1 6 pieces; focal desquamation; 3 pieces are moderately congested 7.2 Esophagus Esophagus - Mucosa 0006920 1105 740 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.9885 218893 0.971914 0.991131 0.744114 21681 1 76 0.00234887 123 0 5.75156e+07 0.0279164 675565 5.80303e+07 6.32231e+06 21698 2.86024e+07 0 0.2278 0.991131 0.737514 5.75156e+07 0.00393387 1.29312e+07 8.91913e+06 1.2988e+07 140 1.29922e+07 7.54397e+06 0.00313927 1.30816e+07 50.1715 0.0116416 0.993761 0 50.1095 GTEX-13O3Q-1126-SM-5K7YK 0 B1 2 pieces; no increase in fibrous stroma 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1113 732 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.987081 154652 0.972342 0.990436 0.80424 22915 1 76 0.00271047 135 0 5.94292e+07 0.0273677 348977 6.00031e+07 1.02914e+07 22933 2.95261e+07 0 0.168102 0.990436 0.796548 5.94292e+07 0.00430046 1.29876e+07 7.47975e+06 1.30817e+07 149 1.30865e+07 9.72347e+06 0.00350278 1.31797e+07 50.1774 0.00581599 0.993791 0 50.1805 GTEX-13O3Q-2126-SM-5KM4C 1 B1 6 pieces; only muscularis present; NO MUCOSA 6 Stomach Stomach 0000945 1145 700 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.986053 201694 0.971636 0.988164 0.803466 22950 1 76 0.00317658 144 0 6.74632e+07 0.0280891 611584 6.82713e+07 4.28398e+06 22969 3.35357e+07 0 0.16817 0.988164 0.793956 6.74632e+07 0.0041811 1.46358e+07 7.32892e+06 1.47264e+07 159 1.47058e+07 1.07821e+07 0.00367777 1.47939e+07 50.1493 0.00895814 0.990275 0 50.1543 GTEX-13O3Q-2226-SM-5KM4O 1 B1 2 pieces; fibrofatty tissue, no ducts; large hole in 1 piece 5.8 Breast Breast - Mammary Tissue 0008367 1149 696 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987052 146128 0.977861 0.98918 0.793188 22049 1 76 0.00320825 122 0 5.5958e+07 0.0217884 143620 5.65701e+07 3.69668e+06 22069 2.78186e+07 0 0.184673 0.98918 0.784605 5.5958e+07 0.00421628 1.23669e+07 5.52854e+06 1.24206e+07 127 1.24317e+07 1.02147e+07 0.00371118 1.24729e+07 50.0828 0.0025388 0.991308 0 50.1083 GTEX-13O3Q-2326-SM-5KM3G 1 B1 2 pieces; several internal holes 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1153 692 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988409 210763 0.971468 0.990377 0.765848 23798 1 76 0.00324617 149 0 7.09234e+07 0.0282065 277474 7.16125e+07 4.40613e+06 23826 3.52662e+07 0 0.20562 0.990377 0.758478 7.09234e+07 0.00427578 1.55292e+07 7.24125e+06 1.56607e+07 155 1.56747e+07 1.15384e+07 0.00375995 1.56485e+07 49.9582 0.00387466 0.992346 0 50.2107 GTEX-13O3Q-2426-SM-5IJBR 1 B1 6 pieces;well trimmed; 10% intradermal fat 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1157 688 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98968 189449 0.967321 0.991854 0.759183 24367 1 76 0.00226288 168 0 7.45749e+07 0.0324914 676878 7.51873e+07 8.53478e+06 24395 3.7104e+07 0 0.208138 0.991854 0.752999 7.45749e+07 0.00383275 1.63879e+07 9.48800e+06 1.64174e+07 182 1.63661e+07 1.02558e+07 0.0030461 1.65937e+07 50.3452 0.00900255 0.994028 0 50.045 GTEX-13O3Q-2526-SM-5IJC4 1 B1 2 pieces; no plaques 8.3 Blood Vessel Artery - Tibial 0007610 1159 686 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990866 201122 0.974628 0.993066 0.829838 21956 1 76 0.00219892 280 0 9.08362e+07 0.0249363 413547 9.14704e+07 1.17214e+07 21981 4.51937e+07 0 0.14479 0.993066 0.824084 9.08362e+07 0.00364366 1.93753e+07 9.06425e+06 1.948e+07 258 1.94729e+07 1.75533e+07 0.00291969 1.95736e+07 50.1289 0.0045211 0.995266 0 50.1347 GTEX-13O3Q-2626-SM-5KM3S 1 B1 2 pieces; 1 piece has 40% external fibroadipose tissue [outlined] 6.4 Nerve Nerve - Tibial 0001323 1160 685 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987428 224652 0.963471 0.989375 0.709258 24112 1 76 0.0033087 134 0 6.42339e+07 0.036237 172328 6.49237e+07 4.16325e+06 24156 3.19156e+07 0 0.254213 0.989375 0.701722 6.42339e+07 0.00444631 1.40775e+07 5.96661e+06 1.41438e+07 139 1.41465e+07 9.09983e+06 0.00387639 1.41956e+07 50.0867 0.00265432 0.991322 0 50.1174 GTEX-13O3Q-2726-SM-5KM51 1 B1 2 pieces; 1% internal fat 8.1 Muscle Muscle - Skeletal 0011907 1163 682 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.991986 163463 0.981646 0.993583 0.860544 19506 1 76 0.00286744 128 0 6.67565e+07 0.0181884 934070 6.71877e+07 4.38665e+06 19514 3.32554e+07 0 0.121102 0.993583 0.855022 6.67565e+07 0.00362052 1.47932e+07 6.87594e+06 1.48488e+07 153 1.48925e+07 1.30702e+07 0.00324337 1.48512e+07 49.9305 0.0139024 0.99518 0 50.0938 GTEX-13O3Q-2826-SM-5KM2N 1 B1 2 pieces; 1 piece is fibromuscular tissue, without glands 6.8 Salivary Gland Minor Salivary Gland 0006330 1167 678 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.986449 197526 0.970108 0.988559 0.767305 24114 1 76 0.00319006 164 0 7.75098e+07 0.0295986 312942 7.84069e+07 4.7839e+06 24147 3.8528e+07 0 0.202803 0.988559 0.758527 7.75098e+07 0.00435746 1.69454e+07 7.43587e+06 1.70657e+07 178 1.70591e+07 1.16558e+07 0.00377251 1.71102e+07 50.0748 0.00399126 0.990669 0 50.1768 GTEX-13O3Q-2926-SM-5KM45 2 B1 2 pieces; adherent meninges on 1 [outlined] 6.1 Brain Brain - Cortex 0001870 1208 637 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990095 417126 0.9568 0.99187 0.831055 23029 1 76 0.00308161 197 0 7.14479e+07 0.042848 2.88925e+06 7.20336e+07 4.5036e+06 23043 3.55623e+07 0 0.125745 0.99187 0.824299 7.14479e+07 0.00394678 1.54944e+07 1.95037e+07 1.57449e+07 218 1.56628e+07 8.28064e+06 0.00351342 1.56885e+07 50.041 0.0401097 0.993645 0 50.4009 GTEX-13O3Q-2926-SM-CYKRS 2 B1 2 pieces; adherent meninges on 1 [outlined] 6.1 Brain Brain - Cortex 0001870 1208 637 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 RIP-Seq GTEX-13O3Q-3026-SM-5IJGD 2 B1 3 pieces; fragmented 6.4 Brain Brain - Cerebellum 0002037 1209 636 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985671 547707 0.932963 0.987254 0.693121 24905 1 76 0.00500152 201 0 9.60082e+07 0.0666896 1.41358e+06 9.72477e+07 6.30257e+06 24944 4.77188e+07 0 0.239842 0.987254 0.684287 9.60082e+07 0.00515884 2.03935e+07 2.7849e+07 2.06002e+07 220 2.06385e+07 1.13156e+07 0.00508005 2.05044e+07 49.8369 0.0145359 0.988838 0 50.2521 GTEX-13O61-0003-SM-5GYAM B1 Blood Whole Blood 0013756 -125 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13O61-0003-SM-5HJRK B1 Blood Whole Blood 0013756 -125 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13O61-0003-SM-6WSAT B1 Blood Whole Blood 0013756 -125 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13O61-0005-SM-5O9AU B1 7.7 Blood Whole Blood 0013756 -125 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987996 506367 0.960621 0.99182 0.812553 17860 1 76 0.00243632 109 0 5.57335e+07 0.0389968 145678 5.61931e+07 7.15034e+06 17870 2.7686e+07 0 0.148069 0.99182 0.805906 5.57335e+07 0.00416151 1.22244e+07 2.45008e+07 1.22869e+07 115 1.23568e+07 1.15516e+07 0.00329559 1.23718e+07 50.0303 0.00259245 0.995644 0 50.1275 GTEX-13O61-0126-SM-5KM4P 1 B1 2 pieces; 20 & 10% external fat at edges 8.2 Adrenal Gland Adrenal Gland 0002369 126 1218 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990066 173607 0.976038 0.991859 0.820794 21106 1 76 0.00329771 125 0 6.09838e+07 0.0236666 1.28408e+06 6.14843e+07 4.00741e+06 21127 3.03584e+07 0 0.155244 0.991859 0.814112 6.09838e+07 0.00403482 1.33581e+07 8.90357e+06 1.34219e+07 142 1.3393e+07 9.14426e+06 0.0036656 1.34875e+07 50.1758 0.0208847 0.993652 0 50.1191 GTEX-13O61-0226-SM-5KM52 0 B1 2 pieces; 20 & 10 % fibrovascular stroma [outlined] 7.6 Thyroid Thyroid 0002046 128 1216 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990221 181739 0.972362 0.992137 0.768112 23583 1 76 0.00313879 160 0 8.01808e+07 0.0273691 265742 8.08163e+07 5.17334e+06 23618 3.99139e+07 0 0.20425 0.992137 0.762072 8.01808e+07 0.0039287 1.76268e+07 7.36536e+06 1.7768e+07 167 1.77646e+07 1.40848e+07 0.00353299 1.77727e+07 50.0115 0.00328822 0.994052 0 50.1995 GTEX-13O61-0326-SM-5KM2O 1 B1 6 pieces; flat sclerotic plaques 6.7 Blood Vessel Artery - Aorta 0001496 131 1213 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989954 143592 0.973689 0.991726 0.8089 22485 1 76 0.00318866 167 0 8.15021e+07 0.0259182 252811 8.21821e+07 5.39322e+06 22512 4.0555e+07 0 0.164789 0.991726 0.802207 8.15021e+07 0.00405284 1.76559e+07 5.87383e+06 1.78639e+07 188 1.78381e+07 1.42232e+07 0.00361998 1.78203e+07 49.9751 0.00307623 0.993498 0 50.2928 GTEX-13O61-0426-SM-5L3ET 0 B1 2 pieces; 1 has 40% fibrous component; other has 40% fat 9.2 Heart Heart - Atrial Appendage 0006631 132 1212 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989552 195092 0.978018 0.993094 0.838662 20450 1 76 0.00311883 124 0 6.94601e+07 0.0217234 1.24542e+06 6.99432e+07 7.39807e+06 20461 3.45484e+07 0 0.139356 0.993094 0.83287 6.94601e+07 0.0038186 1.4684e+07 1.14651e+07 1.46967e+07 161 1.46549e+07 1.2122e+07 0.00346747 1.49365e+07 50.4758 0.0178062 0.996635 0 50.0217 GTEX-13O61-0526-SM-5J2M1 0 B1 2 pieces; well preserved, no lesions or signs of ischemia 8.5 Heart Heart - Left Ventricle 0006566 135 1209 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.978573 273074 0.984453 0.982395 0.851867 21462 1 76 0.00440271 268 0 1.08037e+08 0.0152951 2.08471e+06 1.09973e+08 5.76986e+06 21476 5.36697e+07 0 0.132586 0.982395 0.836869 1.08037e+08 0.00606342 2.36923e+07 2.78305e+07 2.37633e+07 290 2.37002e+07 1.80177e+07 0.00522983 2.41006e+07 50.4188 0.0189566 0.986216 0 50.0748 GTEX-13O61-0626-SM-5L3D1 1 B1 2 pieces; eccentric fibrosclerotic plaque with 50% luminal compromise; up to 1 mm external fat on each 7 Blood Vessel Artery - Coronary 0001621 144 1200 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.983527 201478 0.973263 0.988017 0.82439 22285 1 76 0.00313288 148 0 6.86077e+07 0.026416 325676 6.94398e+07 6.70866e+06 22303 3.4055e+07 0 0.148872 0.988017 0.814511 6.86077e+07 0.00456989 1.4804e+07 5.52544e+06 1.48954e+07 157 1.49277e+07 1.26251e+07 0.00384812 1.50585e+07 50.218 0.00469005 0.992506 0 50.154 GTEX-13O61-0726-SM-5J2MD 1 B1 2 pieces; emphysema; large calcified bronchus and vessels comprise 30% of 1 piece. 8.4 Lung Lung 0008952 149 1195 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983782 296317 0.972956 0.987749 0.787313 24974 1 76 0.00444504 166 0 9.375e+07 0.0267063 340398 9.49128e+07 4.9511e+06 25007 4.65328e+07 0 0.185643 0.987749 0.777668 9.375e+07 0.00619841 2.0646e+07 7.91391e+06 2.0891e+07 194 2.09671e+07 1.61547e+07 0.0053182 2.09202e+07 49.944 0.00358643 0.991716 0 50.2949 GTEX-13O61-0926-SM-5IFFE 1 B1 4 pieces; squamous hyperplasia and chronic inflammation especially in subepithelial glands (elevated lymphoid content) in 2 of 4 pieces [outlined] 8.2 Esophagus Esophagus - Mucosa 0006920 157 1187 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989022 205644 0.972042 0.991868 0.793591 24510 1 76 0.00250208 188 0 7.34835e+07 0.0274513 583972 7.40859e+07 8.80165e+06 24538 3.65465e+07 0 0.178451 0.991868 0.787138 7.34835e+07 0.00388231 1.62616e+07 9.6836e+06 1.6376e+07 169 1.63814e+07 1.26057e+07 0.00319021 1.64579e+07 50.1164 0.00788236 0.994714 0 50.1753 GTEX-13O61-1026-SM-5L3F6 1 B1 4 pieces; submucosal gland in 2 pieces [outlined] 9 Esophagus Esophagus - Muscularis 0004648 160 1184 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989214 160628 0.975786 0.992749 0.826893 22248 1 76 0.00309195 158 0 6.64351e+07 0.0238758 416375 6.69203e+07 6.90277e+06 22265 3.3035e+07 0 0.148893 0.992749 0.820897 6.64351e+07 0.00371757 1.4332e+07 5.63746e+06 1.43802e+07 147 1.44278e+07 1.24564e+07 0.00340364 1.44961e+07 50.1182 0.00622195 0.996284 0 50.084 GTEX-13O61-1126-SM-5L3FI 1 B1 6 pieces; well preserved mucosa and muscle with some surface loss 7.9 Stomach Stomach 0000945 164 1180 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987818 176486 0.977844 0.991905 0.853998 21508 1 76 0.00305804 146 0 6.47625e+07 0.0218753 487204 6.5291e+07 6.71799e+06 21520 3.21816e+07 0 0.123846 0.991905 0.847085 6.47625e+07 0.00411297 1.40727e+07 6.20708e+06 1.41554e+07 154 1.41685e+07 1.19439e+07 0.00358333 1.43036e+07 50.2374 0.00746204 0.995992 0 50.1465 GTEX-13O61-1226-SM-5KM21 0 B1 6 pieces; well dissected muscle 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 166 1178 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987622 152823 0.976594 0.990193 0.838422 22335 1 76 0.00386939 146 0 7.08221e+07 0.0231393 579877 7.15235e+07 3.30314e+06 22351 3.52137e+07 0 0.138172 0.990193 0.8302 7.08221e+07 0.00492771 1.52598e+07 7.01082e+06 1.54872e+07 162 1.54525e+07 1.23426e+07 0.00439717 1.54639e+07 50.0185 0.0081075 0.992763 0 50.3698 GTEX-13O61-1326-SM-5KM31 1 B1 4 pieces; abundant mucosal lymphoid tissue well dissected 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 172 1172 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987682 192078 0.965532 0.989651 0.732253 25686 1 76 0.00353654 211 0 9.62866e+07 0.0339732 387500 9.72936e+07 6.42907e+06 25740 4.7898e+07 0 0.233279 0.989651 0.724674 9.62866e+07 0.0042984 2.11733e+07 1.03912e+07 2.1342e+07 224 2.13659e+07 1.49948e+07 0.00391671 2.13292e+07 49.957 0.00398279 0.991619 0 50.1984 GTEX-13O61-1426-SM-5KM3D 0 B1 6 pieces; well dissected; virtually fat free dermis 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 179 1165 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988063 223483 0.975334 0.990283 0.813785 22666 1 76 0.00328901 189 0 8.09587e+07 0.0244482 545468 8.17531e+07 5.2382e+06 22689 4.02743e+07 0 0.161549 0.990283 0.805877 8.09587e+07 0.00441111 1.77665e+07 8.81738e+06 1.79699e+07 194 1.79633e+07 1.33563e+07 0.0038488 1.7948e+07 49.9787 0.00667214 0.992504 0 50.2846 GTEX-13O61-1526-SM-5KM3P 0 B1 4 pieces; well dissected muscle 8.2 Colon Colon - Sigmoid 0001159 175 1169 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989151 214743 0.975178 0.991224 0.821527 22460 1 76 0.00323033 178 0 7.80376e+07 0.0245177 491640 7.87286e+07 5.22502e+06 22484 3.88282e+07 0 0.15365 0.991224 0.814317 7.80376e+07 0.00413355 1.69013e+07 6.57042e+06 1.7058e+07 184 1.70452e+07 1.33132e+07 0.00368099 1.7067e+07 50.032 0.00624475 0.993297 0 50.2308 GTEX-13O61-1626-SM-5KM3T 1 B1 6 pieces; 5 full thickness, 1 without mucosa 6.6 Colon Colon - Transverse 0001157 178 1166 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.98993 167363 0.976761 0.991879 0.827092 22176 1 76 0.00325219 165 0 7.43953e+07 0.0230108 844034 7.50044e+07 4.99575e+06 22190 3.70191e+07 0 0.149669 0.991879 0.820375 7.43953e+07 0.00423583 1.6222e+07 6.89304e+06 1.64099e+07 187 1.63378e+07 1.09993e+07 0.00374304 1.64336e+07 50.1463 0.0112531 0.993828 0 50.2879 GTEX-13O61-1726-SM-5KM46 0 B1 2 pieces; minimal hyperplasia 6.8 Prostate Prostate 0002367 181 1163 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989398 216383 0.965623 0.991352 0.754022 24971 1 76 0.00328071 139 0 7.1953e+07 0.0341352 291367 7.25807e+07 4.6378e+06 25003 3.57877e+07 0 0.211601 0.991352 0.747501 7.1953e+07 0.00435489 1.57489e+07 6.95128e+06 1.58831e+07 154 1.58838e+07 1.07897e+07 0.00381674 1.58861e+07 50.0035 0.00401439 0.993305 0 50.2121 GTEX-13O61-1826-SM-5KM4I 1 B1 2 pieces; fibrofatty tissue, 1 with several ducts; neural elements outlined 6.3 Breast Breast - Mammary Tissue 0008367 184 1160 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988387 216508 0.977139 0.990717 0.836997 22001 1 76 0.00317875 164 0 7.48688e+07 0.022611 463229 7.55703e+07 4.72424e+06 22023 3.7231e+07 0 0.140142 0.990717 0.829227 7.48688e+07 0.00433112 1.64311e+07 6.22809e+06 1.65551e+07 184 1.65132e+07 1.26172e+07 0.00375358 1.66428e+07 50.1954 0.00612978 0.993048 0 50.188 GTEX-13O61-1926-SM-5KM1R 0 B1 2 pieces 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 185 1159 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985764 205278 0.978454 0.988806 0.854259 22085 1 76 0.00393856 169 0 7.54304e+07 0.021268 900625 7.62843e+07 3.62531e+06 22100 3.74648e+07 0 0.124195 0.988806 0.844696 7.54304e+07 0.00537145 1.6557e+07 6.70496e+06 1.66941e+07 190 1.66538e+07 1.22348e+07 0.0046528 1.68138e+07 50.2391 0.0118062 0.991848 0 50.2062 GTEX-13O61-2026-SM-5J2M6 1 B1 2 pieces; spermatogenesis 7.2 Testis Testis 0000473 187 1157 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984041 293571 0.934983 0.987745 0.730186 33898 1 76 0.00441087 172 0 1.00043e+08 0.0647036 834561 1.01285e+08 5.27648e+06 33979 4.96729e+07 0 0.204797 0.987745 0.721237 1.00043e+08 0.00603756 2.10234e+07 1.20176e+07 2.10891e+07 186 2.12192e+07 1.61576e+07 0.00522116 2.12219e+07 50.0032 0.00823975 0.991449 0 50.078 GTEX-13O61-2126-SM-5IJEO 1 B1 2 pieces; several small foci of exocrine atrophy [outlined];40 & 20% internal & external fat 6.3 Pancreas Pancreas 0001150 188 1156 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.985379 248507 0.976151 0.987638 0.826737 22129 1 76 0.00501095 114 0 9.1554e+07 0.0233793 237402 9.27e+07 6.25262e+06 22151 4.5505e+07 0 0.149413 0.987638 0.816517 9.1554e+07 0.00551428 2.09159e+07 2.84755e+07 2.13372e+07 131 2.13124e+07 2.49148e+07 0.00526204 2.11523e+07 49.8115 0.00256097 0.989896 0 50.4986 GTEX-13O61-2326-SM-5J1NJ 0 B1 3 pieces; 5-10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 334 1010 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990762 185986 0.984196 0.992332 0.871774 20017 1 76 0.00386205 276 0 9.78587e+07 0.0155805 1.03224e+06 9.86148e+07 5.18039e+06 20028 4.87341e+07 0 0.112422 0.992332 0.865089 9.78587e+07 0.00438232 2.15003e+07 1.1722e+07 2.16586e+07 271 2.15774e+07 1.90359e+07 0.00412177 2.17165e+07 50.1607 0.0104673 0.993902 0 50.1833 GTEX-13O61-2426-SM-5J1NV 0 B1 2 pieces; 1 mm focus of skeletal muscle on 1 piece 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 337 1007 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987988 242118 0.978917 0.989954 0.825445 22598 1 76 0.00403464 199 0 9.00991e+07 0.0207782 461983 9.10135e+07 5.31368e+06 22631 4.47769e+07 0 0.153473 0.989954 0.817152 9.00991e+07 0.00483485 1.97567e+07 8.00794e+06 1.9857e+07 212 1.98696e+07 1.59966e+07 0.00443395 1.9916e+07 50.0583 0.00507598 0.991919 0 50.1265 GTEX-13O61-2526-SM-5J1O8 1 B1 2 pieces; heavily calcified artery 8 Blood Vessel Artery - Tibial 0007610 339 1005 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988281 135528 0.972667 0.990257 0.807388 21823 1 76 0.00403276 138 0 7.09311e+07 0.0269135 304076 7.16289e+07 3.76681e+06 21842 3.52613e+07 0 0.165279 0.990257 0.799522 7.09311e+07 0.00466281 1.52484e+07 4.95075e+06 1.53116e+07 150 1.53224e+07 1.27188e+07 0.00434716 1.53697e+07 50.077 0.00424516 0.992233 0 50.1034 GTEX-13O61-2626-SM-5KM4U 0 B1 2 pieces; 5 & 10% internal fat 7.2 Nerve Nerve - Tibial 0001323 341 1003 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988553 624091 0.96571 0.990416 0.733053 28302 1 76 0.00329304 541 0 2.21575e+08 0.0339982 548523 2.23719e+08 1.44526e+07 28404 1.10179e+08 0 0.232657 0.990416 0.726027 2.21575e+08 0.00426516 4.84929e+07 1.99579e+07 4.88205e+07 455 4.87971e+07 3.35062e+07 0.00377819 4.89112e+07 50.0584 0.00245184 0.992279 0 50.1683 GTEX-13O61-5004-SM-AN3ZO B1 Lung Lung 0008952 151 ChIP-Seq GTEX-13O61-5019-SM-AN3ZQ B1 Muscle Muscle - Skeletal 0011907 336 ChIP-Seq GTEX-13OVG-0003-SM-5GYCC B1 Blood Whole Blood 0013756 -97 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVG-0003-SM-5HJR9 B1 Blood Whole Blood 0013756 -97 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OVG-0003-SM-6WSAV B1 Blood Whole Blood 0013756 -97 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVG-0005-SM-5P9HA B1 6.9 Blood Whole Blood 0013756 -97 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.971766 691043 0.973299 0.972587 0.821127 17689 1 76 0.00306704 193 0 1.19436e+08 0.0260023 291807 1.22803e+08 4.03913e+06 17694 5.94992e+07 0 0.152172 0.972587 0.798617 1.19436e+08 0.0038304 2.73929e+07 1.62971e+08 2.80742e+07 245 2.79979e+07 3.17848e+07 0.0034484 2.75807e+07 49.6246 0.00237623 0.973407 0 50.6142 GTEX-13OVG-0226-SM-5LU93 1 B1 2 pieces, no abnormalities 5.7 Thyroid Thyroid 0002046 432 830 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989477 365661 0.964152 0.991849 0.722584 24064 1 76 0.00450753 127 0 6.91163e+07 0.0356025 245809 6.96843e+07 5.88627e+06 24097 3.43415e+07 0 0.241568 0.991849 0.716695 6.91163e+07 0.0037971 1.50828e+07 7.08243e+06 1.51469e+07 142 1.51568e+07 9.96109e+06 0.00415316 1.523e+07 50.1204 0.00352747 0.994221 0 50.1061 GTEX-13OVG-0326-SM-5KM57 1 B1 2 pieces, moderate congestion 7.6 Lung Lung 0008952 437 825 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988551 217286 0.970206 0.99064 0.767335 23662 1 76 0.00328966 141 0 7.22268e+07 0.0295093 360680 7.29092e+07 4.69016e+06 23694 3.59175e+07 0 0.202871 0.99064 0.760153 7.22268e+07 0.00437995 1.58939e+07 6.24792e+06 1.61067e+07 162 1.60773e+07 1.08495e+07 0.00383366 1.60659e+07 49.9823 0.00494697 0.992729 0 50.3325 GTEX-13OVG-0426-SM-5KM2T 1 B1 2 pieces, no abnormalities 8.5 Heart Heart - Atrial Appendage 0006631 443 819 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.99159 184629 0.977425 0.993217 0.822159 22446 1 76 0.00293843 268 0 8.79132e+07 0.0223059 1.89376e+06 8.85136e+07 5.59508e+06 22463 4.37853e+07 0 0.155266 0.993217 0.816582 8.79132e+07 0.00366288 1.84751e+07 1.4864e+07 1.86546e+07 258 1.85149e+07 1.42149e+07 0.00330006 1.87409e+07 50.3034 0.0213951 0.994844 0 50.2418 GTEX-13OVG-0526-SM-5K7YD 1 B1 2 pieces, mild/moderate ischemic changes 7.6 Heart Heart - Left Ventricle 0006566 450 812 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991681 151047 0.981113 0.99395 0.847382 20835 1 76 0.0024413 196 0 7.68966e+07 0.0186912 1.17389e+06 7.73646e+07 1.41412e+07 20849 3.8302e+07 0 0.13373 0.99395 0.842255 7.68966e+07 0.00359326 1.71152e+07 1.50967e+07 1.67167e+07 246 1.67113e+07 1.13441e+07 0.00301596 1.72751e+07 50.8295 0.0151734 0.996218 0 49.4111 GTEX-13OVG-0626-SM-5IFEP 1 B1 6 pieces, squamous mucosa up to ~0.5mm, ~30% thickness; few submucosal mucus glands noted, rep encircled 8.8 Esophagus Esophagus - Mucosa 0006920 455 807 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986271 275652 0.975469 0.989449 0.821864 23276 1 76 0.00239706 210 0 9.27005e+07 0.024059 399003 9.3689e+07 1.14431e+07 23296 4.61036e+07 0 0.153605 0.989449 0.813192 9.27005e+07 0.00373837 2.08548e+07 1.75681e+07 2.09434e+07 255 2.10295e+07 1.83682e+07 0.00306556 2.10558e+07 50.0313 0.0042588 0.992627 0 50.106 GTEX-13OVG-0726-SM-5IJBY 1 B1 2 pieces, hemisections, adherent nubbins of fat up to ~2mm; ~50% occlusive atherosis noted in one section (est) 6 Blood Vessel Artery - Coronary 0001621 458 804 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988615 197485 0.970619 0.991679 0.794877 22811 1 76 0.00237536 128 0 5.89901e+07 0.0286476 274042 5.9485e+07 7.25746e+06 22835 2.92899e+07 0 0.175742 0.991679 0.788263 5.89901e+07 0.004228 1.28661e+07 5.78676e+06 1.2903e+07 144 1.28819e+07 9.42306e+06 0.00329882 1.30619e+07 50.3468 0.00460691 0.994744 0 50.0718 GTEX-13OVG-0826-SM-5L3D8 1 B1 6 pieces 7.9 Blood Vessel Artery - Aorta 0001496 461 801 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987689 249101 0.974708 0.991813 0.824412 21576 1 76 0.00304159 137 0 6.70793e+07 0.0249019 196781 6.7633e+07 6.84472e+06 21590 3.33163e+07 0 0.150296 0.991813 0.817663 6.70793e+07 0.00419975 1.44784e+07 5.32972e+06 1.45828e+07 150 1.46434e+07 1.25365e+07 0.00361826 1.46742e+07 50.0526 0.00290954 0.995937 0 50.1797 GTEX-13OVG-0926-SM-5J2OJ 1 B1 7 pieces, all muscularis, adherent nubbin serosa in one section, delineated 8.4 Esophagus Esophagus - Muscularis 0004648 465 797 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984262 232406 0.974973 0.988266 0.836088 22418 1 76 0.00419294 213 0 8.63123e+07 0.0247418 771021 8.73371e+07 4.78805e+06 22439 4.28559e+07 0 0.138885 0.988266 0.826277 8.63123e+07 0.00588662 1.83998e+07 8.63195e+06 1.85128e+07 205 1.85443e+07 1.46838e+07 0.00503635 1.86748e+07 50.1753 0.0088281 0.99227 0 50.1531 GTEX-13OVG-1026-SM-5KLZ3 1 B1 6 pieces, all muscularis 6.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 467 795 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988643 149025 0.97581 0.991018 0.844 22197 1 76 0.00368896 206 0 8.52205e+07 0.0239526 1.06461e+06 8.59929e+07 3.92933e+06 22212 4.23756e+07 0 0.131811 0.991018 0.836418 8.52205e+07 0.00487278 1.82911e+07 9.66277e+06 1.85076e+07 246 1.84193e+07 1.29781e+07 0.00427945 1.85626e+07 50.1936 0.0123802 0.993392 0 50.2941 GTEX-13OVG-1326-SM-5K7Y3 1 B1 2 pieces, minimal vascular/fascial tissue 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 484 778 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989581 139082 0.974581 0.992188 0.829667 21964 1 76 0.00258444 139 0 6.19804e+07 0.0251679 465983 6.24684e+07 1.08488e+07 21980 3.08486e+07 0 0.144915 0.992188 0.823186 6.19804e+07 0.00393762 1.36363e+07 6.43584e+06 1.3693e+07 160 1.36697e+07 9.17974e+06 0.00325925 1.38156e+07 50.2654 0.0074595 0.994796 0 50.1039 GTEX-13OVG-1426-SM-5K7VP 2 B1 6 pieces, mucosa ~0.4mm, ~20% thickness, not well preserved, missing in some sections 6.1 Colon Colon - Transverse 0001157 500 762 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.984388 224304 0.973 0.986832 0.825207 23324 1 76 0.00427866 165 0 8.04612e+07 0.0266961 574765 8.15349e+07 5.39446e+06 23344 3.99724e+07 0 0.147793 0.986832 0.81434 8.04612e+07 0.00503323 1.76211e+07 7.88776e+06 1.77221e+07 190 1.77213e+07 1.30096e+07 0.00465502 1.78137e+07 50.13 0.00704931 0.989275 0 50.1428 GTEX-13OVG-1626-SM-5J1NF 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~45-50 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 515 747 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.985968 230287 0.97083 0.988076 0.770695 24726 1 76 0.00406149 180 0 8.49973e+07 0.0289697 454505 8.60231e+07 4.55987e+06 24758 4.22596e+07 0 0.200134 0.988076 0.761506 8.49973e+07 0.0048321 1.87424e+07 9.12963e+06 1.89089e+07 186 1.89231e+07 1.36778e+07 0.00444597 1.8901e+07 49.9707 0.00528352 0.990184 0 50.2211 GTEX-13OVG-1926-SM-5L3DK 0 B1 8 pieces, minimal dermal fat; squamous epithelium is 60-70 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 644 618 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987887 262883 0.970795 0.991773 0.767118 24773 1 76 0.00317537 197 0 8.76345e+07 0.0289649 344849 8.83615e+07 8.79181e+06 24806 4.3542e+07 0 0.203677 0.991773 0.760806 8.76345e+07 0.00405364 1.91686e+07 9.29345e+06 1.91662e+07 198 1.9262e+07 1.44032e+07 0.00361278 1.93836e+07 50.1573 0.00390271 0.995658 0 49.9969 GTEX-13OVG-2126-SM-5KM1K 0 B1 2 pieces, ~15-20% interstitial fat, rep delineated 7.6 Muscle Muscle - Skeletal 0011907 645 617 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.989181 186501 0.984242 0.991377 0.868693 20298 1 76 0.00351169 277 0 9.20041e+07 0.0155559 1.3459e+06 9.28043e+07 4.19095e+06 20306 4.57889e+07 0 0.115549 0.991377 0.861202 9.20041e+07 0.00456216 2.00228e+07 1.46359e+07 2.00843e+07 267 2.00778e+07 1.72359e+07 0.00403576 2.02027e+07 50.1551 0.0145026 0.993574 0 50.0768 GTEX-13OVG-2226-SM-5K7V8 0 B1 2 pieces, partial rim adherent fat, ~0.4-0.5mm, delineated 6.2 Nerve Nerve - Tibial 0001323 646 616 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98401 217488 0.962499 0.98669 0.723313 24146 1 76 0.00448323 149 0 7.37389e+07 0.0372972 290915 7.47336e+07 5.23568e+06 24180 3.66116e+07 0 0.239186 0.98669 0.713686 7.37389e+07 0.00529873 1.61056e+07 7.78661e+06 1.62245e+07 153 1.62372e+07 9.79199e+06 0.00488988 1.62852e+07 50.0739 0.00389269 0.989371 0 50.1838 GTEX-13OVG-2326-SM-5J1OV 0 B1 2 pieces, adherent rims of fat/peripheral nerve, ~1.5-2mm, delineated 7.9 Blood Vessel Artery - Tibial 0007610 646 616 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98839 211440 0.974474 0.990498 0.822449 22371 1 76 0.00397048 162 0 8.34554e+07 0.0252245 272168 8.4256e+07 4.72162e+06 22391 4.14945e+07 0 0.152025 0.990498 0.814634 8.34554e+07 0.00476521 1.79792e+07 6.84555e+06 1.81094e+07 184 1.8091e+07 1.54839e+07 0.004367 1.81692e+07 50.1079 0.00323025 0.992606 0 50.1803 GTEX-13OVG-5004-SM-AN3ZG B1 Heart Heart - Left Ventricle 0006566 452 ChIP-Seq GTEX-13OVG-5019-SM-AN3ZI B1 Muscle Muscle - Skeletal 0011907 648 ChIP-Seq GTEX-13OVH-0003-SM-5CV8F C1 Blood Whole Blood 0013756 497 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVH-0003-SM-5HJPW_1 C1 Blood Whole Blood 0013756 497 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13OVH-0003-SM-6WSCP C1 Blood Whole Blood 0013756 497 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVH-0005-SM-5P9HB C1 6.9 Blood Whole Blood 0013756 497 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.974019 539637 0.981106 0.974869 0.811584 18704 1 76 0.00316879 192 0 1.20282e+08 0.017724 270096 1.23383e+08 4.18816e+06 18713 5.98914e+07 0 0.169522 0.974869 0.791189 1.20282e+08 0.00397991 2.77241e+07 1.60547e+08 2.86481e+07 213 2.85757e+07 3.20055e+07 0.003574 2.79474e+07 49.4442 0.00218909 0.97572 0 50.8195 GTEX-13OVH-0011-R10a-SM-AHZMU C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 504 ChIP-Seq GTEX-13OVH-0011-R11b-SM-5KM4X C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 504 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988164 474344 0.942487 0.989982 0.735205 23425 1 76 0.0034063 156 0 7.93556e+07 0.0570722 876686 8.01586e+07 5.07887e+06 23459 3.94745e+07 0 0.207281 0.989982 0.72784 7.93556e+07 0.00410556 1.70529e+07 1.43163e+07 1.7105e+07 186 1.71458e+07 1.03632e+07 0.00375529 1.71456e+07 49.9998 0.0109369 0.991799 0 50.0761 GTEX-13OVH-0011-R3a-SM-5KM49 C1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 504 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990647 629723 0.948534 0.992419 0.822248 22543 1 76 0.00330274 151 0 6.24199e+07 0.0511578 3.87201e+06 6.28967e+07 3.9445e+06 22556 3.10742e+07 0 0.126286 0.992419 0.816015 6.24199e+07 0.00407369 1.34829e+07 2.31127e+07 1.36029e+07 172 1.35357e+07 6.31267e+06 0.00368753 1.36609e+07 50.2302 0.0615614 0.994191 0 50.2215 GTEX-13OVH-0011-R4a-SM-5KM3W C1, A1 6.3 Brain Brain - Amygdala 0001876 504 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.99028 679153 0.954615 0.99213 0.824219 21716 1 76 0.00351064 265 0 7.29318e+07 0.0452407 8.0878e+06 7.35103e+07 4.77596e+06 21726 3.63112e+07 0 0.130396 0.99213 0.817732 7.29318e+07 0.00430335 1.55586e+07 3.39941e+07 1.60419e+07 260 1.57413e+07 4.53391e+06 0.00390625 1.59782e+07 50.3735 0.110023 0.993981 0 50.7647 GTEX-13OVH-0011-R5b-SM-5KM4L C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 504 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.990041 1.02198e+06 0.937046 0.99189 0.786869 23177 1 76 0.00334523 195 0 7.51335e+07 0.0627153 5.0537e+06 7.57478e+07 4.82457e+06 23191 3.74022e+07 0 0.150177 0.99189 0.780487 7.51335e+07 0.00405801 1.59586e+07 3.9577e+07 1.60553e+07 237 1.60079e+07 6.65851e+06 0.00370096 1.61531e+07 50.2257 0.0667174 0.993738 0 50.151 GTEX-13OVH-0011-R6b-SM-5LUAX C1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 504 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989635 448831 0.955144 0.991992 0.805585 23479 1 76 0.00482931 141 0 6.22036e+07 0.0447078 5.47149e+06 6.27057e+07 5.56405e+06 23498 3.09116e+07 0 0.149559 0.991992 0.799134 6.22036e+07 0.00419274 1.34336e+07 1.7754e+07 1.36821e+07 173 1.35096e+07 4.82161e+06 0.00451178 1.37408e+07 50.4241 0.0872567 0.994349 0 50.4581 GTEX-13OVH-0011-R8b-SM-5MR35 C1, A1 6.1 Brain Brain - Hypothalamus 0001898 504 BP-47087 RNA isolation_PAXgene Tissue miRNA 12/12/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991708 726309 0.950922 0.992242 0.816988 24743 1 76 0.00290772 373 0 1.00208e+08 0.0488794 5.74604e+06 1.00991e+08 3.64225e+06 24769 4.99309e+07 0 0.133934 0.992242 0.81065 1.00208e+08 0.00306743 2.17919e+07 2.67373e+07 2.20642e+07 361 2.17776e+07 9.29279e+06 0.00298753 2.21383e+07 50.4106 0.0568963 0.992775 0 50.3105 GTEX-13OVH-0126-SM-5MR4B 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~30-40 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 562 1426 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993243 202527 0.973438 0.993684 0.771676 22747 1 76 0.00285856 185 0 7.783e+07 0.0263367 288964 7.83247e+07 3.02436e+06 22783 3.87977e+07 0 0.201763 0.993684 0.766802 7.783e+07 0.00289671 1.71607e+07 8.33558e+06 1.72309e+07 178 1.72091e+07 1.31076e+07 0.00287763 1.72187e+07 50.0139 0.00368931 0.994125 0 50.102 GTEX-13OVH-0426-SM-5K7UC 0 C1 2 pieces, clean specimens; no significant atherosis 6.7 Blood Vessel Artery - Tibial 0007610 571 1420 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.981558 189897 0.971165 0.984035 0.826304 21364 1 76 0.00443525 136 0 6.80795e+07 0.02854 190431 6.9184e+07 4.88825e+06 21382 3.37893e+07 0 0.144861 0.984035 0.813112 6.80795e+07 0.00526198 1.45808e+07 7.1373e+06 1.47152e+07 150 1.46883e+07 1.24297e+07 0.00484757 1.47763e+07 50.1493 0.00275253 0.986512 0 50.2294 GTEX-13OVH-0526-SM-5L3E6 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~15-30 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 585 1406 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986923 164462 0.973747 0.990809 0.771325 22359 1 76 0.00327093 140 0 6.35347e+07 0.0260306 404366 6.4124e+07 6.82668e+06 22391 3.15727e+07 0 0.202422 0.990809 0.764236 6.35347e+07 0.00416421 1.40589e+07 7.29554e+06 1.4099e+07 139 1.41593e+07 1.02796e+07 0.00371582 1.42259e+07 50.1173 0.006306 0.994695 0 50.0713 GTEX-13OVH-0626-SM-5L3EI 0 C1 2 pieces, ~10-15% interstitial fat, rep delineated 8.1 Muscle Muscle - Skeletal 0011907 592 1400 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.989008 214340 0.983294 0.992671 0.868033 19340 1 76 0.00309038 208 0 8.01986e+07 0.0164796 609018 8.07908e+07 8.77481e+06 19352 3.98849e+07 0 0.115261 0.992671 0.861672 8.01986e+07 0.00377725 1.76099e+07 1.05055e+07 1.76023e+07 208 1.76341e+07 1.59779e+07 0.00343255 1.78405e+07 50.2909 0.00753821 0.996334 0 49.9891 GTEX-13OVH-0726-SM-5N9BU 2 C1 2 pieces, spermatogenesis appears reduced 5.7 Testis Testis 0000473 594 1399 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.99025 211978 0.932283 0.991313 0.712658 33298 1 76 0.00301349 173 0 8.77879e+07 0.0674574 1.04861e+06 8.85571e+07 4.193e+06 33365 4.37217e+07 0 0.219625 0.991313 0.706468 8.77879e+07 0.00347091 1.84477e+07 1.21096e+07 1.8496e+07 200 1.8477e+07 1.17071e+07 0.00324195 1.85509e+07 50.0998 0.0118411 0.992377 0 50.0654 GTEX-13OVH-1026-SM-5J2NP 2 C1 2 pieces, moderate congestion 6.5 Lung Lung 0008952 603 1395 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982908 158613 0.974478 0.986818 0.765654 22924 1 76 0.00457626 135 0 7.74311e+07 0.0251575 375443 7.84655e+07 4.1644e+06 22956 3.84267e+07 0 0.208823 0.986818 0.755561 7.74311e+07 0.00630144 1.70471e+07 7.19963e+06 1.71803e+07 158 1.72349e+07 1.13412e+07 0.00543543 1.72753e+07 50.0585 0.00478482 0.990727 0 50.1945 GTEX-13OVH-1026-SM-CYKS2 2 C1 2 pieces, moderate congestion 6.5 Lung Lung 0008952 603 1395 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 RIP-Seq GTEX-13OVH-1126-SM-5K7YP 1 C1 2 pieces, '10-15% fibro-fascial/vascular tissue, rep delineated 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 604 1394 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989071 110349 0.982781 0.991441 0.829677 20577 1 76 0.00258077 132 0 5.59542e+07 0.0169102 209646 5.64373e+07 8.58247e+06 20586 2.78455e+07 0 0.153103 0.991441 0.822576 5.59542e+07 0.00385817 1.23874e+07 6.53399e+06 1.25151e+07 132 1.25209e+07 1.12469e+07 0.00321794 1.25152e+07 49.9886 0.00371467 0.99381 0 50.2563 GTEX-13OVH-1826-SM-5K7YW 1 C1 6 pieces, adherent fat/serosa on several sections up to ~1.5mm, rep. delineated 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 628 1378 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988474 296713 0.975484 0.991231 0.761898 24830 1 76 0.00277236 375 0 1.27627e+08 0.0242771 750317 1.28756e+08 2.38633e+07 24887 6.34547e+07 0 0.213585 0.991231 0.755217 1.27627e+08 0.00421884 2.81594e+07 1.34468e+07 2.82454e+07 383 2.82179e+07 1.92991e+07 0.00349359 2.85315e+07 50.2763 0.00582742 0.993988 0 50.0762 GTEX-13OVH-2926-SM-5IJFH 1 C1 4 pieces, no abnormalities 7 Brain Brain - Cerebellum 0002037 655 1358 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98546 422163 0.941833 0.987153 0.716044 24482 1 76 0.00507684 157 0 9.02831e+07 0.05784 1.15038e+06 9.14581e+07 5.93132e+06 24521 4.48527e+07 0 0.22579 0.987153 0.706845 9.02831e+07 0.00532595 1.93592e+07 1.74489e+07 1.95415e+07 200 1.95849e+07 1.0498e+07 0.00520119 1.94631e+07 49.8441 0.0125782 0.988847 0 50.2343 GTEX-13OVH-3026-SM-5MR4N 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 657 1356 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992983 537525 0.951143 0.993483 0.807106 23912 1 76 0.00295156 269 0 8.42223e+07 0.048505 2.79394e+06 8.47748e+07 3.51961e+06 23932 4.19884e+07 0 0.144037 0.993483 0.801846 8.42223e+07 0.00295496 1.81968e+07 2.45359e+07 1.83863e+07 260 1.82898e+07 9.85824e+06 0.00295326 1.8339e+07 50.0672 0.0329572 0.993983 0 50.259 GTEX-13OVH-3026-SM-CYKS1 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 657 1356 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 RIP-Seq GTEX-13OVH-3126-SM-5MR4Z 1 C1 1 piece, ~2x1mm nubbin of neurohypophysis delineated, rest is adenohypophysis 6.4 Pituitary Pituitary 0000007 658 1356 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992498 271174 0.959806 0.993004 0.758509 25229 1 76 0.00295326 203 0 8.61035e+07 0.0399633 484456 8.67102e+07 3.38748e+06 25275 4.29152e+07 0 0.201297 0.993004 0.753202 8.61035e+07 0.00299548 1.86588e+07 1.15169e+07 1.87911e+07 230 1.8756e+07 1.19318e+07 0.00297436 1.87384e+07 49.9764 0.00558707 0.99351 0 50.1766 GTEX-13OVI-0001-SM-5O9BL B1 7.1 Blood Whole Blood 0013756 -83 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.972919 814090 0.97465 0.975136 0.828352 18224 1 76 0.00379896 266 0 1.4154e+08 0.0246375 145909 1.45149e+08 5.65767e+06 18236 7.04233e+07 0 0.146298 0.975136 0.807756 1.4154e+08 0.00489425 3.29709e+07 1.83321e+08 3.3469e+07 290 3.35319e+07 3.90377e+07 0.00434536 3.32386e+07 49.7804 0.00100524 0.977353 0 50.3748 GTEX-13OVI-0003-SM-5GY9X B1 Blood Whole Blood 0013756 -83 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVI-0003-SM-5HJQK B1 Blood Whole Blood 0013756 -83 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OVI-0003-SM-6WSCW B1 Blood Whole Blood 0013756 -83 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVI-0326-SM-5K7X1 1 B1 2 pieces cardiac atrium no abnormalities 8.4 Heart Heart - Atrial Appendage 0006631 147 559 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991793 112958 0.979871 0.993903 0.836993 20671 1 76 0.00284649 125 0 6.76514e+07 0.0198295 1.12289e+06 6.80664e+07 1.18408e+07 20680 3.37033e+07 0 0.142878 0.993903 0.83189 6.76514e+07 0.00379182 1.43906e+07 1.1298e+07 1.41898e+07 163 1.41049e+07 1.0889e+07 0.00331816 1.45967e+07 50.8567 0.016497 0.996012 0 49.6487 GTEX-13OVI-0526-SM-5IFFQ 1 B1 2 pieces, 10-20% adherent fat, delineated; Islets well-preserved, rep encircled 7.4 Pancreas Pancreas 0001150 158 548 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988496 333309 0.967753 0.992328 0.827874 21440 1 76 0.00268781 105 0 6.88850e+07 0.0317412 178376 6.94176e+07 8.80808e+06 21453 3.42287e+07 0 0.139878 0.992328 0.821523 6.88850e+07 0.00423723 1.56204e+07 2.11103e+07 1.58888e+07 107 1.59385e+07 1.95361e+07 0.00345953 1.58361e+07 49.8389 0.00256961 0.99616 0 50.4259 GTEX-13OVI-0626-SM-5IJCN 1 B1 6 pieces, adherent serosa up to ~1mm on several sections, rep delineated 7.5 Blood Vessel Artery - Aorta 0001496 161 545 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988966 183138 0.972511 0.991872 0.820967 22215 1 76 0.00230023 136 0 5.95924e+07 0.0272138 245537 6.00808e+07 7.64459e+06 22231 2.96262e+07 0 0.151544 0.991872 0.814294 5.95924e+07 0.0041769 1.30225e+07 5.73492e+06 1.30607e+07 145 1.30255e+07 1.04651e+07 0.00323582 1.32278e+07 50.3853 0.00408678 0.994778 0 50.0732 GTEX-13OVI-0726-SM-5L3DD 1 B1 2 pieces, typical post menopausal atrophy with prominent corpora albicantia 8 Ovary Ovary 0000992 163 543 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988855 253264 0.968928 0.992748 0.830515 21686 1 76 0.0030863 147 0 6.4986e+07 0.0307767 190721 6.54608e+07 6.14651e+06 21703 3.22915e+07 0 0.138414 0.992748 0.824492 6.4986e+07 0.00413488 1.41872e+07 1.15308e+07 1.42871e+07 142 1.43162e+07 1.43278e+07 0.00360854 1.44047e+07 50.1539 0.00291352 0.99664 0 50.1754 GTEX-13OVI-0826-SM-5KLZ8 1 B1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 166 540 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.98622 132692 0.964852 0.988365 0.742779 23976 1 76 0.00401221 159 0 7.99721e+07 0.0348979 340378 8.09135e+07 3.60802e+06 24012 3.97663e+07 0 0.222073 0.988365 0.734137 7.99721e+07 0.00501641 1.74216e+07 8.23855e+06 1.75527e+07 168 1.75488e+07 1.16061e+07 0.00451322 1.75815e+07 50.0465 0.00420669 0.990511 0 50.1874 GTEX-13OVI-0926-SM-5J1MI 1 B1 6 pieces, atrophic squamous mucosa 7.3 Vagina Vagina 0000996 171 535 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987642 280586 0.969798 0.989513 0.784519 24298 1 76 0.00408971 215 0 9.62518e+07 0.0298644 316581 9.72718e+07 5.35988e+06 24328 4.78143e+07 0 0.185279 0.989513 0.776292 9.62518e+07 0.00500689 2.10786e+07 8.03979e+06 2.11901e+07 218 2.11604e+07 1.58026e+07 0.00454743 2.12876e+07 50.1498 0.0032546 0.991384 0 50.1319 GTEX-13OVI-1026-SM-5L3EM 1 B1 2 pieces, myometrium with hyalinizing small leiomyomata, encircled; minute focus of adenomyosis, delineated 8.4 Uterus Uterus 0000995 173 533 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.983696 277176 0.968766 0.988002 0.774749 22934 1 76 0.00326093 140 0 6.758e+07 0.0309238 212601 6.84007e+07 6.42546e+06 22957 3.35469e+07 0 0.194016 0.988002 0.765454 6.758e+07 0.00443178 1.47761e+07 6.09538e+06 1.47531e+07 148 1.48084e+07 1.11659e+07 0.00384381 1.49922e+07 50.3082 0.00310817 0.992308 0 49.961 GTEX-13OVI-1126-SM-5KLZF 1 B1 6 pieces, all sections with glomeruli, marked diffuse glomerular sclerosis 8.8 Kidney Kidney - Cortex 0001225 177 529 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986629 167698 0.968687 0.989059 0.774082 25866 1 76 0.00411084 208 0 9.20363e+07 0.0306965 452726 9.30544e+07 4.31102e+06 25905 4.5757e+07 0 0.194605 0.989059 0.765613 9.20363e+07 0.00503139 2.01628e+07 9.98082e+06 2.02728e+07 225 2.03266e+07 1.49631e+07 0.00456999 2.03178e+07 49.9891 0.00486518 0.991489 0 50.1359 GTEX-13OVI-1226-SM-5J2ME 1 B1 2 pieces, all cortex, well preserved 9.3 Adrenal Gland Adrenal Gland 0002369 181 525 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982122 216926 0.975448 0.986075 0.816164 23346 1 76 0.00468363 203 0 8.89152e+07 0.0242455 1.66431e+06 9.01708e+07 4.81128e+06 23369 4.41435e+07 0 0.159283 0.986075 0.804799 8.89152e+07 0.00634863 1.96101e+07 1.21375e+07 1.97157e+07 207 1.97623e+07 1.37525e+07 0.00551279 1.98766e+07 50.1442 0.0184573 0.990028 0 50.1343 GTEX-13OVI-1326-SM-5IJBO 0 B1 2 pieces prominent fibrosis surrounds islets of uninvovled adipose tissue (delineated), ~50% of specimen 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 183 523 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989162 196455 0.973083 0.99177 0.81356 22212 1 76 0.00227027 148 0 6.47212e+07 0.0266542 218750 6.52582e+07 7.81598e+06 22235 3.21824e+07 0 0.159523 0.99177 0.806865 6.47212e+07 0.00406019 1.41415e+07 6.64216e+06 1.42066e+07 153 1.41558e+07 1.19207e+07 0.00316288 1.43594e+07 50.3569 0.00335207 0.994379 0 50.1149 GTEX-13OVI-1426-SM-5L3EY 0 B1 6 pieces, minimal adherent dermal fat, squamous epithelium is ~30 microns, atrophic 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 187 519 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986607 266081 0.972575 0.990815 0.806822 23082 1 76 0.00329133 172 0 7.03684e+07 0.0271592 316431 7.10208e+07 7.21087e+06 23104 3.49504e+07 0 0.165752 0.990815 0.799411 7.03684e+07 0.00437373 1.53938e+07 7.32398e+06 1.54524e+07 153 1.55259e+07 1.33379e+07 0.00383023 1.55958e+07 50.1124 0.00445547 0.995022 0 50.095 GTEX-13OVI-1526-SM-5K7VX 0 B1 2 pieces, minute nubbins adherent fat on one (~0.3mm), delineated, good clean specimens 7.8 Nerve Nerve - Tibial 0001323 192 514 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985173 267867 0.968449 0.987788 0.770494 24330 1 76 0.00453129 228 0 9.53059e+07 0.0312567 276214 9.64841e+07 6.43982e+06 24371 4.73455e+07 0 0.197955 0.987788 0.761084 9.53059e+07 0.00517281 2.08931e+07 8.60799e+06 2.10425e+07 205 2.10714e+07 1.59742e+07 0.0048512 2.11034e+07 50.0379 0.00286279 0.990403 0 50.1782 GTEX-13OVI-1726-SM-5L3DW 0 B1 2 pieces, ~15% interstitial fat, rep delineated 8.4 Muscle Muscle - Skeletal 0011907 206 500 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988571 186251 0.977694 0.992251 0.852275 19819 1 76 0.003054 152 0 6.40633e+07 0.0220707 422899 6.45636e+07 6.9556e+06 19832 3.18549e+07 0 0.12542 0.992251 0.84567 6.40633e+07 0.0038154 1.38956e+07 8.54414e+06 1.39328e+07 148 1.39713e+07 1.33844e+07 0.00343328 1.40679e+07 50.1722 0.00655011 0.995932 0 50.0667 GTEX-13OVI-1826-SM-5IFFT 1 B1 6 pieces, well preserved mucosa, ~0.5-0.8mm thick, 30-50% thickness, mainly antral with prominent foveolargastropathic changes 8.6 Stomach Stomach 0000945 214 492 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4813 03/05/2014 TruSeq.v1 EXCLUDE 0.984943 214814 0.977117 0.987772 0.826432 22549 1 76 0.00255235 221 0 7.39646e+07 0.0223926 316637 7.48803e+07 8.8774e+06 22566 3.67919e+07 0 0.150685 0.987772 0.816326 7.39646e+07 0.00390579 1.65517e+07 1.04575e+07 1.66297e+07 175 1.66679e+07 1.44555e+07 0.00322713 1.67174e+07 50.0742 0.00422858 0.990601 0 50.1175 GTEX-13OVI-1926-SM-5IJCG 1 B1 6 pieces, well-preserved, lymphoid aggregates ~10% total, best for LCM or TMA studies 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 224 482 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988164 175122 0.968642 0.991175 0.785959 23335 1 76 0.00255681 143 0 6.69007e+07 0.0311515 774565 6.74964e+07 8.89596e+06 23355 3.32667e+07 0 0.182683 0.991175 0.779023 6.69007e+07 0.00437313 1.46254e+07 7.9275e+06 1.46204e+07 160 1.45624e+07 9.13833e+06 0.00346221 1.48756e+07 50.5319 0.0114757 0.994187 0 49.9915 GTEX-13OVI-2026-SM-5J1MU 2 B1 6 pieces, mucosa variably preserved but largely sloughed 6.3 Colon Colon - Transverse 0001157 231 475 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98428 157690 0.971371 0.986104 0.818024 23786 1 76 0.00422125 276 0 9.82999e+07 0.0284134 1.00892e+06 9.96851e+07 5.57515e+06 23811 4.88309e+07 0 0.153347 0.986104 0.806656 9.82999e+07 0.00502646 2.14027e+07 9.3031e+06 2.15622e+07 265 2.14599e+07 1.47409e+07 0.00462311 2.16781e+07 50.253 0.0101211 0.987928 0 50.1855 GTEX-13OVI-2126-SM-5KM3U 1 B1 6 pieces, mainly muscularis, ~10% 'contaminant mucosa' present 7.8 Colon Colon - Sigmoid 0001159 236 470 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989322 195070 0.976864 0.991359 0.825088 22279 1 76 0.00323963 175 0 8.17419e+07 0.0227853 472900 8.24544e+07 5.18131e+06 22299 4.0689e+07 0 0.151776 0.991359 0.817958 8.17419e+07 0.00398641 1.77828e+07 7.21943e+06 1.79393e+07 196 1.79553e+07 1.50506e+07 0.00361225 1.79214e+07 49.9528 0.00573529 0.993396 0 50.2191 GTEX-13OVI-2326-SM-5KM47 1 B1 2 pieces, 90% glandular elements, good specimens; ~10% stroma delineated 7.2 Salivary Gland Minor Salivary Gland 0006330 244 462 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988673 186402 0.969998 0.990291 0.781472 24071 1 76 0.00369591 144 0 7.03711e+07 0.0283782 238456 7.10611e+07 4.31408e+06 24097 3.49676e+07 0 0.188526 0.990291 0.773885 7.03711e+07 0.0044867 1.55751e+07 8.4341e+06 1.5677e+07 148 1.56996e+07 1.22987e+07 0.00409066 1.56612e+07 49.9387 0.00335565 0.991909 0 50.1629 GTEX-13OVI-2426-SM-5KM4J 1 B1 7 pieces, gastric mucosa; not GEJ smooth muscle. May be used for GTEx if re-labeled 7 Stomach Stomach 0000945 262 444 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988 225599 0.973355 0.990226 0.804284 23222 1 76 0.00332852 170 0 7.95989e+07 0.0263698 503939 8.03845e+07 5.07662e+06 23245 3.9586e+07 0 0.16907 0.990226 0.796424 7.95989e+07 0.00443129 1.73825e+07 7.22884e+06 1.75592e+07 185 1.75134e+07 1.28642e+07 0.00387866 1.75993e+07 50.1223 0.0062691 0.992453 0 50.2528 GTEX-13OVI-2526-SM-5KM4V 1 B1 6 pieces, all muscularis, good speicmens 6.6 Esophagus Esophagus - Muscularis 0004648 276 430 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989717 180418 0.976147 0.991822 0.821089 21810 1 76 0.00342763 167 0 7.27923e+07 0.0235965 928960 7.33925e+07 4.82484e+06 21825 3.62096e+07 0 0.155058 0.991822 0.814375 7.27923e+07 0.00435548 1.58807e+07 7.25657e+06 1.60132e+07 174 1.59751e+07 1.12436e+07 0.00389057 1.60665e+07 50.1426 0.0126574 0.993928 0 50.2077 GTEX-13OVI-2626-SM-5KM4T 1 B1 6 pieces, squamous mucosa is ~0.3mm, 15-20% of total thickness 9.1 Esophagus Esophagus - Mucosa 0006920 276 430 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.989337 259934 0.975357 0.991265 0.825675 21712 1 76 0.00337133 155 0 6.94992e+07 0.0241891 297467 7.01117e+07 4.38351e+06 21726 3.45788e+07 0 0.149682 0.991265 0.818462 6.94992e+07 0.00431465 1.55389e+07 9.71852e+06 1.56946e+07 151 1.56968e+07 1.40038e+07 0.00384207 1.56663e+07 49.9513 0.00424276 0.993193 0 50.2492 GTEX-13OVI-2726-SM-5KM56 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~30 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 261 445 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.987773 169098 0.973522 0.989785 0.817853 23137 1 76 0.00325259 161 0 7.42321e+07 0.0262543 418960 7.49982e+07 4.73915e+06 23159 3.69149e+07 0 0.155669 0.989785 0.809499 7.42321e+07 0.00435956 1.63003e+07 7.99507e+06 1.64017e+07 172 1.63676e+07 1.3019e+07 0.00380495 1.64839e+07 50.1771 0.00558627 0.991798 0 50.1551 GTEX-13OVI-5001-SM-AN3ZK B1 Heart Heart - Left Ventricle 0006566 150 ChIP-Seq GTEX-13OVI-5007-SM-AN3ZJ B1 Muscle Muscle - Skeletal 0011907 211 ChIP-Seq GTEX-13OVJ-0001-SM-5GYAL B1 Blood Whole Blood 0013756 874 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVJ-0001-SM-5HJR8 B1 Blood Whole Blood 0013756 874 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OVJ-0001-SM-6WSAU B1 Blood Whole Blood 0013756 874 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVJ-0006-SM-5O98T B1 7.4 Blood Whole Blood 0013756 874 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.959267 421737 0.98296 0.962242 0.807029 17617 1 76 0.00179352 135 0 9.94172e+07 0.0157966 228743 1.03318e+08 1.45754e+07 17623 4.94131e+07 0 0.175932 0.962242 0.776557 9.94172e+07 0.00347172 2.35771e+07 1.60546e+08 2.3541e+07 165 2.35547e+07 2.75689e+07 0.00263002 2.38825e+07 50.3456 0.00221397 0.965217 0 49.9617 GTEX-13OVJ-0011-R10b-SM-5L3HT B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 868 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990636 857309 0.937593 0.993001 0.774703 24046 1 76 0.00218434 157 0 6.68456e+07 0.0620244 3.77566e+06 6.73167e+07 4.81571e+06 24063 3.32655e+07 0 0.16289 0.993001 0.769281 6.68456e+07 0.00289031 1.43552e+07 3.08304e+07 1.44328e+07 179 1.44423e+07 8.10406e+06 0.00253648 1.45056e+07 50.1093 0.056088 0.995366 0 50.1347 GTEX-13OVJ-0011-R11a-SM-5P9H8 B1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 868 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.988828 859455 0.924093 0.98919 0.641304 27107 1 76 0.00342325 272 0 1.14766e+08 0.0755395 1.84276e+06 1.1602e+08 4.01815e+06 27168 5.70602e+07 0 0.282789 0.98919 0.634372 1.14766e+08 0.00396437 2.42443e+07 3.43818e+07 2.4448e+07 270 2.44308e+07 1.26169e+07 0.00369371 2.43093e+07 49.8754 0.0158831 0.989551 0 50.2092 GTEX-13OVJ-0011-R1b-SM-5L3I6 B1, A1 7.3 Brain Brain - Hippocampus 0001954 868 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990883 760567 0.949446 0.993526 0.813525 23510 1 76 0.00209797 164 0 6.82079e+07 0.0502529 3.77446e+06 6.86523e+07 5.6158e+06 23529 3.39287e+07 0 0.135921 0.993526 0.808259 6.82079e+07 0.00308039 1.48171e+07 2.34748e+07 1.49471e+07 196 1.49183e+07 8.58977e+06 0.00258787 1.50328e+07 50.1911 0.0549794 0.99617 0 50.2184 GTEX-13OVJ-0011-R2b-SM-5L3GP B1, A1 6.6 Brain Brain - Substantia nigra 0002038 868 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991486 302771 0.9671 0.993805 0.853035 22741 1 76 0.00207465 203 0 6.79496e+07 0.032634 5.09512e+06 6.83732e+07 5.35128e+06 22756 3.38202e+07 0 0.114065 0.993805 0.84775 6.79496e+07 0.00295807 1.51424e+07 1.24401e+07 1.52231e+07 208 1.5134e+07 9.17061e+06 0.00251533 1.53806e+07 50.4041 0.0745193 0.996124 0 50.1328 GTEX-13OVJ-0011-R3b-SM-5P9H6 B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 868 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.991778 458864 0.958274 0.991924 0.797053 24983 1 76 0.00293658 395 0 1.15904e+08 0.041411 3.30003e+06 1.16848e+08 3.85869e+06 25015 5.77099e+07 0 0.161221 0.991924 0.790616 1.15904e+08 0.00351079 2.54816e+07 1.92932e+07 2.59614e+07 339 2.56901e+07 1.6901e+07 0.00322365 2.57651e+07 50.0729 0.0282421 0.99207 0 50.4664 GTEX-13OVJ-0011-R4b-SM-5P9H5 B1, A1 6.7 Brain Brain - Amygdala 0001876 868 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992569 1.61528e+06 0.94008 0.992415 0.788507 26620 1 76 0.002805 379 0 1.2844e+08 0.0595622 8.49612e+06 1.29422e+08 4.16501e+06 26664 6.39406e+07 0 0.151573 0.992415 0.782527 1.2844e+08 0.00334377 2.75249e+07 5.82716e+07 2.79091e+07 346 2.76041e+07 1.56376e+07 0.00307443 2.7837e+07 50.2101 0.0656468 0.992261 0 50.3466 GTEX-13OVJ-0011-R5a-SM-5P9H7 B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 868 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.99142 1.21667e+06 0.946056 0.991744 0.798124 25408 1 76 0.00285872 375 0 1.12302e+08 0.05361 8.09912e+06 1.13237e+08 3.77292e+06 25430 5.59123e+07 0 0.147932 0.991744 0.791535 1.12302e+08 0.00347908 2.4177e+07 4.74571e+07 2.452e+07 340 2.43747e+07 1.38965e+07 0.0031688 2.43838e+07 50.0093 0.0715238 0.992069 0 50.3522 GTEX-13OVJ-0011-R6b-SM-5L3GH B1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 868 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990535 435433 0.954988 0.992791 0.805216 24346 1 76 0.00233026 201 0 7.31266e+07 0.044634 4.92664e+06 7.36576e+07 6.20079e+06 24368 3.6396e+07 0 0.149772 0.992791 0.799411 7.31266e+07 0.00305404 1.59711e+07 1.73055e+07 1.60634e+07 225 1.60264e+07 9.71484e+06 0.00269132 1.61695e+07 50.2222 0.0668856 0.995047 0 50.1441 GTEX-13OVJ-0011-R7a-SM-5L3G1 B1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 868 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991202 615772 0.955024 0.993444 0.80783 24420 1 76 0.00219073 205 0 7.76365e+07 0.0446772 5.35877e+06 7.81488e+07 5.7578e+06 24437 3.86391e+07 0 0.147194 0.993444 0.802534 7.76365e+07 0.00297135 1.70132e+07 2.21572e+07 1.70696e+07 250 1.70414e+07 1.0131e+07 0.00258016 1.72159e+07 50.2547 0.0685714 0.995687 0 50.0827 GTEX-13OVJ-0011-R8b-SM-5L3FS B1, A1 7.2 Brain Brain - Hypothalamus 0001898 868 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991714 332567 0.960334 0.993884 0.833643 24062 1 76 0.00220758 280 0 7.70767e+07 0.0394404 5.33802e+06 7.7551e+07 6.3591e+06 24079 3.83808e+07 0 0.12669 0.993884 0.828545 7.70767e+07 0.00290961 1.69937e+07 1.49448e+07 1.71795e+07 273 1.71023e+07 9.30445e+06 0.00255783 1.72252e+07 50.1791 0.0688324 0.996054 0 50.2718 GTEX-13OVJ-0011-R9b-SM-5L3GD B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 868 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991633 708521 0.950337 0.993901 0.805884 24616 1 76 0.00214179 279 0 8.51163e+07 0.0493982 5.04657e+06 8.56386e+07 6.78011e+06 24637 4.23684e+07 0 0.144453 0.993901 0.800969 8.51163e+07 0.00297127 1.85592e+07 2.59522e+07 1.87804e+07 297 1.87029e+07 9.94758e+06 0.00255558 1.88216e+07 50.1581 0.0589286 0.996169 0 50.2961 GTEX-13OVJ-0126-SM-5KM36 1 B1 6 pieces; solar elastosis, epidermis measures about 67 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1117 816 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987954 174335 0.975744 0.989862 0.77123 24202 1 76 0.00322601 290 0 9.54997e+07 0.0240221 550068 9.64778e+07 6.30187e+06 24239 4.75227e+07 0 0.204514 0.989862 0.763411 9.54997e+07 0.00404546 2.10795e+07 9.3094e+06 2.12415e+07 257 2.12522e+07 1.54375e+07 0.00363495 2.12434e+07 49.9897 0.0057015 0.991769 0 50.1913 GTEX-13OVJ-0226-SM-5L3GK 1 B1 2 pieces; 1 piece includes ~10% attached fat 7.8 Muscle Muscle - Skeletal 0011907 1118 815 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991707 303609 0.982977 0.994207 0.86283 19017 1 76 0.00192801 157 0 6.66179e+07 0.0168223 686376 6.70061e+07 5.30892e+06 19025 3.31608e+07 0 0.120147 0.994207 0.857832 6.66179e+07 0.00281674 1.47208e+07 8.22823e+06 1.47728e+07 167 1.47814e+07 1.32662e+07 0.00237126 1.48685e+07 50.1469 0.0102435 0.996706 0 50.0881 GTEX-13OVJ-0326-SM-5L3GL 0 B1 2 pieces; fat with ~10% fibrous/vessels 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1119 814 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990086 220442 0.977532 0.992473 0.781662 22353 1 76 0.00224381 171 0 7.53888e+07 0.0221941 397865 7.59605e+07 5.88314e+06 22380 3.75153e+07 0 0.19587 0.992473 0.775779 7.53888e+07 0.00308936 1.65775e+07 7.70511e+06 1.66582e+07 185 1.66748e+07 1.24458e+07 0.00266557 1.67294e+07 50.0817 0.00523779 0.994861 0 50.1215 GTEX-13OVJ-0426-SM-5L3GX 1 B1 3 pieces; 1 piece includes ~15% fat (attached and internal) 6.4 Nerve Nerve - Tibial 0001323 1120 813 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990387 164614 0.970861 0.992769 0.752157 22236 1 76 0.00222606 135 0 5.9353e+07 0.0289074 190549 5.97853e+07 4.79992e+06 22261 2.9533e+07 0 0.218704 0.992769 0.746718 5.9353e+07 0.00314399 1.3068e+07 5.53103e+06 1.31384e+07 135 1.31446e+07 9.62320e+06 0.00268393 1.31965e+07 50.0984 0.00318722 0.995151 0 50.1342 GTEX-13OVJ-0626-SM-5J2O2 2 B1 2 pieces; some nodularity and regressive change 7.3 Thyroid Thyroid 0002046 1123 810 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982567 242636 0.972036 0.987063 0.805032 23934 1 76 0.00430844 167 0 9.24986e+07 0.027689 359398 9.3711e+07 5.34306e+06 23957 4.58915e+07 0 0.167005 0.987063 0.794617 9.24986e+07 0.00611271 2.03058e+07 1.46627e+07 2.05257e+07 191 2.06386e+07 1.68913e+07 0.00520647 2.05914e+07 49.9427 0.00383518 0.991558 0 50.2692 GTEX-13OVJ-0726-SM-5KM1W 1 B1 2 pieces; congestion, edema, fibrin, patchy pneumonia 6.9 Lung Lung 0008952 1124 809 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987988 145061 0.976573 0.990075 0.799226 23015 1 76 0.0038335 136 0 6.88745e+07 0.0230964 140218 6.95649e+07 2.91701e+06 23036 3.42371e+07 0 0.177347 0.990075 0.791294 6.88745e+07 0.00487263 1.5163e+07 8.54004e+06 1.53234e+07 148 1.53353e+07 1.24071e+07 0.00435197 1.52923e+07 49.9297 0.00201564 0.992163 0 50.2631 GTEX-13OVJ-0826-SM-5J1OK 1 B1 6 pieces; well trimmed 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1126 807 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987476 199104 0.976339 0.989509 0.789924 22999 1 76 0.00407514 165 0 7.79887e+07 0.0233957 463891 7.88156e+07 4.4499e+06 23024 3.87557e+07 0 0.186415 0.989509 0.781636 7.79887e+07 0.00483245 1.72078e+07 7.82205e+06 1.73023e+07 171 1.73101e+07 1.29847e+07 0.00445302 1.73564e+07 50.0668 0.00588578 0.991541 0 50.137 GTEX-13OVJ-0926-SM-5K7U1 1 B1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1129 804 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986242 209571 0.979514 0.988593 0.812501 22424 1 76 0.00424334 171 0 8.90589e+07 0.0201935 379909 9.00865e+07 6.10474e+06 22452 4.42608e+07 0 0.167013 0.988593 0.803233 8.90589e+07 0.00490708 1.95231e+07 8.81916e+06 1.97323e+07 194 1.97519e+07 1.67753e+07 0.00457442 1.9713e+07 49.9507 0.00421716 0.990944 0 50.2664 GTEX-13OVJ-1026-SM-5IFGI 1 B1 2 pieces; cirrhosis, steatosis, Mallory hyaline c/w alcoholic cirrhosis 6.2 Liver Liver 0001114 1129 804 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4813 03/05/2014 TruSeq.v1 EXCLUDE 0.986907 244341 0.975034 0.99071 0.813085 22129 1 76 0.00229785 134 0 6.09133e+07 0.0246876 1.08613e+06 6.14845e+07 6.70881e+06 22144 3.02498e+07 0 0.161948 0.99071 0.805532 6.09133e+07 0.00405032 1.3414e+07 8.84145e+06 1.34485e+07 149 1.34796e+07 1.0523e+07 0.00317072 1.36102e+07 50.2411 0.0176652 0.994513 0 50.0641 GTEX-13OVJ-1226-SM-5L3HA 1 B1 7 pieces (fragmented) 5.9 Esophagus Esophagus - Mucosa 0006920 1138 795 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990486 233717 0.971951 0.99305 0.774265 23069 1 76 0.00226182 135 0 6.48311e+07 0.0278352 358524 6.52848e+07 5.4815e+06 23090 3.22454e+07 0 0.197686 0.99305 0.768884 6.48311e+07 0.00322487 1.44193e+07 8.04742e+06 1.44777e+07 150 1.44856e+07 1.08296e+07 0.0027421 1.45751e+07 50.1539 0.00549169 0.995614 0 50.101 GTEX-13OVJ-1326-SM-5K7Z9 1 B1 6 pieces; well trimmed, small detached fragment of squamous epithelium 6.3 Esophagus Esophagus - Muscularis 0004648 1139 794 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988777 128805 0.972242 0.991629 0.792555 21708 1 76 0.00267215 131 0 6.19096e+07 0.0275634 675765 6.24323e+07 1.15342e+07 21730 3.07741e+07 0 0.179687 0.991629 0.785921 6.19096e+07 0.00416452 1.33987e+07 6.02037e+06 1.34995e+07 149 1.3478e+07 9.68317e+06 0.00341619 1.35912e+07 50.2091 0.010824 0.994481 0 50.1873 GTEX-13OVJ-1426-SM-5K7Z2 1 B1 6 pieces; 2 pieces include significant fat, nerve, vessels 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1141 792 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988968 116556 0.969049 0.991825 0.777363 21926 1 76 0.00270714 128 0 5.95063e+07 0.0307771 755347 5.99968e+07 1.14045e+07 21948 2.95799e+07 0 0.191686 0.991825 0.771008 5.95063e+07 0.00415094 1.28564e+07 5.91316e+06 1.29429e+07 144 1.29117e+07 8.88248e+06 0.00342696 1.30513e+07 50.2689 0.0125898 0.994682 0 50.1677 GTEX-13OVJ-1726-SM-5IJDZ 2 B1 6 pieces; full thickness sections 6.4 Colon Colon - Transverse 0001157 1148 785 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.983126 251060 0.973381 0.985063 0.782919 23640 1 76 0.00565638 158 0 8.10104e+07 0.0226169 816276 8.22389e+07 5.30414e+06 23669 4.00725e+07 0 0.190462 0.985063 0.771224 8.10104e+07 0.00608291 1.80128e+07 1.22645e+07 1.8203e+07 173 1.82849e+07 1.19481e+07 0.00586923 1.80879e+07 49.7291 0.00992567 0.986999 0 50.2627 GTEX-13OVJ-1826-SM-5KM2D 2 B1 5 pieces; predominantly muscularis with scant residual mucosa and fat 6.5 Colon Colon - Sigmoid 0001159 1152 781 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985586 193046 0.973383 0.988378 0.796838 22966 1 76 0.00387401 162 0 7.8795e+07 0.0263952 547490 7.97215e+07 3.81875e+06 22988 3.91446e+07 0 0.176545 0.988378 0.787577 7.8795e+07 0.00517927 1.71157e+07 6.98015e+06 1.73038e+07 172 1.73002e+07 1.33028e+07 0.0045248 1.73307e+07 50.0441 0.00686753 0.99117 0 50.2733 GTEX-13OVJ-2326-SM-5IJGA 1 B1 2 pieces; myometrium only 6.5 Uterus Uterus 0000995 1165 768 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984566 250080 0.973006 0.986421 0.720861 24060 1 76 0.00487362 217 0 1.09787e+08 0.0267302 220601 1.11298e+08 7.48304e+06 24110 5.45039e+07 0 0.252145 0.986421 0.711072 1.09787e+08 0.00519576 2.41103e+07 1.12522e+07 2.43183e+07 218 2.43435e+07 1.79908e+07 0.00503439 2.42907e+07 49.9458 0.00198207 0.988275 0 50.2148 GTEX-13OVJ-2426-SM-5KM3I 1 B1 2 pieces 6.8 Ovary Ovary 0000992 1167 766 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.987572 392366 0.962574 0.989561 0.722482 23381 1 76 0.00325929 156 0 8.1249e+07 0.037163 109317 8.21062e+07 5.41265e+06 23423 4.03695e+07 0 0.240092 0.989561 0.71494 8.1249e+07 0.00433814 1.76831e+07 2.01331e+07 1.78687e+07 158 1.78706e+07 1.49229e+07 0.00379763 1.7862e+07 49.9879 0.00133141 0.991549 0 50.261 GTEX-13OVJ-2626-SM-5IJFT 1 B1 1 pieces; adenohypophysis and neurohypophysis 7.7 Pituitary Pituitary 0000007 1209 724 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987435 414702 0.961352 0.989339 0.77738 25206 1 76 0.00480169 207 0 9.669e+07 0.0383821 293648 9.77319e+07 6.26722e+06 25250 4.80797e+07 0 0.183972 0.989339 0.769093 9.669e+07 0.00495766 2.03337e+07 1.70308e+07 2.05282e+07 219 2.05756e+07 1.69698e+07 0.00487953 2.0464e+07 49.8641 0.00300463 0.991242 0 50.238 GTEX-13OVJ-2726-SM-5IJG6 2 B1 2 pieces; some Purkinje cells with changes suggestive of hypoxic damage 7.5 Brain Brain - Cerebellum 0002037 1215 718 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98476 891160 0.923894 0.986571 0.667451 26455 1 76 0.00518382 161 0 9.82142e+07 0.0757475 1.77753e+06 9.95511e+07 6.52558e+06 26501 4.87757e+07 0 0.256444 0.986571 0.658487 9.82142e+07 0.00540613 2.06841e+07 3.97391e+07 2.09831e+07 201 2.10193e+07 1.16087e+07 0.00529477 2.08277e+07 49.7711 0.0178554 0.988381 0 50.3588 GTEX-13OVJ-2826-SM-5L3GW 1 B1 2 pieces; adherent meninges 6.4 Brain Brain - Cortex 0001870 1216 717 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990804 497249 0.950654 0.993093 0.793646 24003 1 76 0.0021878 160 0 6.59302e+07 0.0490221 3.20946e+06 6.63887e+07 5.5462e+06 24020 3.28185e+07 0 0.157008 0.993093 0.788164 6.59302e+07 0.0029705 1.43188e+07 2.12996e+07 1.44557e+07 180 1.44411e+07 8.21124e+06 0.00257825 1.44776e+07 50.0632 0.0483435 0.995383 0 50.2378 GTEX-13OVK-0001-SM-5GYAH B1 Blood Whole Blood 0013756 -36 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVK-0001-SM-5HJQJ B1 Blood Whole Blood 0013756 -36 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OVK-0001-SM-6WSCS B1 Blood Whole Blood 0013756 -36 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVK-0006-SM-5O9B7 B1 7.7 Blood Whole Blood 0013756 -36 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.966826 637612 0.976575 0.969441 0.817301 16723 1 76 0.00195942 96 0 8.49664e+07 0.0222711 233761 8.76448e+07 1.16033e+07 16726 4.22527e+07 0 0.159274 0.969441 0.792325 8.49664e+07 0.0037906 2.02144e+07 1.4615e+08 2.00503e+07 134 2.00812e+07 2.4215e+07 0.00287254 2.04429e+07 50.4463 0.00266714 0.972056 0 49.7963 GTEX-13OVK-0226-SM-6M472 1 B1 2 pieces; 30% of 1 piece is extrathyroidal fibrous tissue [marked] 7.6 Thyroid Thyroid 0002046 189 1037 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993601 187180 0.965144 0.995263 0.747445 23272 1 76 0.00241203 124 0 6.14247e+07 0.0345757 139396 6.17171e+07 8.32214e+06 23302 3.06062e+07 0 0.217699 0.995263 0.743904 6.14247e+07 0.00352591 1.34736e+07 6.04626e+06 1.34776e+07 132 1.34917e+07 1.00742e+07 0.00296804 1.35567e+07 50.1202 0.00225863 0.996924 0 50.0074 GTEX-13OVK-0326-SM-7KUEJ 1 B1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 189 1037 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987376 342516 0.972107 0.991514 0.816026 23771 1 76 0.00304055 164 0 7.87328e+07 0.0276142 609557 7.94066e+07 7.03302e+06 23797 3.90808e+07 0 0.156082 0.991514 0.809101 7.87328e+07 0.00348979 1.71624e+07 7.9845e+06 1.73181e+07 202 1.74442e+07 1.27751e+07 0.00326424 1.7342e+07 49.8531 0.0076764 0.995652 0 50.2258 GTEX-13OVK-0426-SM-7KFT8 1 B1 2 pieces; moderate congestion 6.4 Spleen Spleen 0002106 196 1030 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.98397 405130 0.961842 0.986678 0.803199 23652 1 76 0.00460999 161 0 8.60257e+07 0.032467 374596 8.71872e+07 6.4767e+06 23672 4.24965e+07 0 0.158643 0.986678 0.792498 8.60257e+07 0.00513067 1.90583e+07 3.17394e+07 1.9337e+07 192 1.9442e+07 1.32159e+07 0.00486962 1.91917e+07 49.6761 0.00429646 0.989386 0 50.3629 GTEX-13OVK-0826-SM-7KULZ 2 B1 6 pieces: 3 with & 3 without mucosa 6.5 Colon Colon - Transverse 0001157 210 1016 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989226 312289 0.96991 0.990868 0.81182 24826 1 76 0.00412822 277 0 9.52963e+07 0.0274361 655381 9.61745e+07 7.01529e+06 24865 4.72991e+07 0 0.15809 0.990868 0.804406 9.52963e+07 0.00481003 2.07083e+07 1.15694e+07 2.09249e+07 296 2.09843e+07 1.42887e+07 0.00446856 2.07922e+07 49.7702 0.0068145 0.99251 0 50.2602 GTEX-13OVK-0926-SM-7KUFX 1 B1 6 pieces: 2 without muscularis propria 7 Stomach Stomach 0000945 215 1011 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.965353 211308 0.984913 0.970658 0.869678 21748 1 76 0.00310836 351 0 8.24151e+07 0.0144186 280644 8.49064e+07 7.34326e+06 21766 4.08383e+07 0 0.115236 0.970658 0.84416 8.24151e+07 0.00362936 1.92775e+07 1.30652e+08 1.94705e+07 248 1.97039e+07 2.66705e+07 0.00336744 1.94928e+07 49.7306 0.00330533 0.975964 0 50.249 GTEX-13OVK-1026-SM-7KFTC 1 B1 4 pieces 7.8 Colon Colon - Sigmoid 0001159 219 1007 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991219 205996 0.973924 0.993569 0.829107 23148 1 76 0.00264646 214 0 8.72346e+07 0.0257842 316966 8.77992e+07 6.28673e+06 23166 4.33841e+07 0 0.144816 0.993569 0.823775 8.72346e+07 0.00301254 1.88283e+07 7.03154e+06 1.90736e+07 255 1.90884e+07 1.53053e+07 0.00282907 1.90085e+07 49.8951 0.00361012 0.995919 0 50.3237 GTEX-13OVK-1126-SM-6PAMR 1 B1 6 pieces; squamous hyperplasia 8.8 Esophagus Esophagus - Mucosa 0006920 223 1003 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982821 198088 0.974283 0.988694 0.804227 23531 1 76 0.00343164 279 0 9.91688e+07 0.0250927 398663 1.00303e+08 1.14948e+07 23557 4.91762e+07 0 0.170056 0.988694 0.795134 9.91688e+07 0.00539969 2.22509e+07 1.32042e+07 2.21807e+07 256 2.24204e+07 1.89148e+07 0.00440982 2.25989e+07 50.1983 0.0039746 0.994567 0 49.9209 GTEX-13OVK-1226-SM-6M473 1 B1 6 pieces; well dissected 8.5 Esophagus Esophagus - Muscularis 0004648 225 1001 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994847 151462 0.976151 0.996207 0.846603 21497 1 76 0.00228532 141 0 6.35004e+07 0.0235248 246556 6.37422e+07 8.69847e+06 21508 3.1659e+07 0 0.129548 0.996207 0.843392 6.35004e+07 0.00317487 1.36434e+07 4.73162e+06 1.37052e+07 145 1.36752e+07 1.26233e+07 0.00272949 1.37565e+07 50.1481 0.00386802 0.997567 0 50.1128 GTEX-13OVK-1426-SM-6PAN7 1 B1 6 pieces; well dissected; minimal dermal fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 229 997 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979011 297051 0.969031 0.98695 0.771403 24648 1 76 0.00337258 286 0 1.02885e+08 0.0307527 359648 1.04245e+08 1.2565e+07 24694 5.0916e+07 0 0.197628 0.98695 0.761336 1.02885e+08 0.00597117 2.25141e+07 1.28638e+07 2.25335e+07 276 2.28775e+07 1.57661e+07 0.00466142 2.29763e+07 50.1078 0.00345003 0.994889 0 50.0216 GTEX-13OVK-1726-SM-7KUE9 1 B1 2 pieces; well dissected 6.5 Blood Vessel Artery - Tibial 0007610 256 970 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988993 335883 0.974452 0.992065 0.814403 21738 1 76 0.00295221 167 0 8.11377e+07 0.0251156 273119 8.17866e+07 6.96095e+06 21762 4.03068e+07 0 0.160049 0.992065 0.807941 8.11377e+07 0.00337041 1.72666e+07 6.98282e+06 1.7467e+07 196 1.75733e+07 1.5551e+07 0.00316067 1.73953e+07 49.7455 0.00333941 0.995137 0 50.2885 GTEX-13OVK-1826-SM-6PALE 1 B1 2 pieces; 1 well dissected, other with 60% fibromuscular tissue 7.3 Salivary Gland Minor Salivary Gland 0006330 258 968 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979398 279152 0.969546 0.986204 0.771258 25216 1 76 0.0037237 277 0 1.03422e+08 0.0287542 282091 1.04869e+08 1.25911e+07 25258 5.11487e+07 0 0.198288 0.986204 0.760618 1.03422e+08 0.00593258 2.31513e+07 1.67943e+07 2.31959e+07 263 2.35379e+07 1.70755e+07 0.00482052 2.35074e+07 49.9676 0.00268994 0.99301 0 50.0481 GTEX-13OVK-1926-SM-6M48G 1 B1 2 pieces; 1 with vessels and fat 8.2 Muscle Muscle - Skeletal 0011907 272 954 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.995495 94972 0.982503 0.996783 0.861776 19412 1 76 0.0021624 158 0 6.63803e+07 0.0172845 665511 6.65945e+07 8.95632e+06 19420 3.3111e+07 0 0.120727 0.996783 0.859004 6.63803e+07 0.00302734 1.44601e+07 8.07623e+06 1.44229e+07 170 1.43925e+07 1.17457e+07 0.00259431 1.45751e+07 50.3153 0.00999348 0.99807 0 49.9355 GTEX-13OVK-2026-SM-7KUEO 1 B1 6 pieces; 10% dermal fat; variable subcutaneous fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 278 948 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985169 345519 0.978088 0.988458 0.839374 22845 1 76 0.00313744 185 0 7.74386e+07 0.021648 330639 7.83428e+07 6.9224e+06 22863 3.84875e+07 0 0.138714 0.988458 0.829686 7.74386e+07 0.00316695 1.67603e+07 8.27352e+06 1.69647e+07 196 1.70787e+07 1.47779e+07 0.00315215 1.68886e+07 49.7201 0.00422041 0.991746 0 50.303 GTEX-13OVK-2126-SM-6PAN1 1 B1 2 pieces; virtually pure adipose tissue 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 275 951 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5864,LCSET-5875,LCSET-6159 09/18/2014 TruSeq.v1 RNASEQ 0.982227 239093 0.97357 0.98888 0.793019 24740 1 76 0.00260828 212 0 9.57962e+07 0.0261402 549347 9.68735e+07 7.40637e+06 24774 4.74402e+07 0 0.180551 0.98888 0.7842 9.57962e+07 0.00441734 2.094e+07 8.89703e+06 2.09677e+07 252 2.12087e+07 1.5836e+07 0.00350672 2.13136e+07 50.1233 0.00567077 0.995533 0 50.033 GTEX-13OVK-2226-SM-6LPJY 1 B1 2 fragmented pieces; active spermatogenesis 6.5 Testis Testis 0000473 281 945 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990722 240319 0.933961 0.992879 0.728016 32256 1 76 0.00271004 138 0 7.04956e+07 0.0657797 915894 7.10012e+07 1.09621e+07 32317 3.51035e+07 0 0.205945 0.992879 0.722832 7.04956e+07 0.00359739 1.48467e+07 9.81568e+06 1.4726e+07 145 1.47579e+07 1.0467e+07 0.00315275 1.49485e+07 50.3207 0.0128997 0.995037 0 49.7958 GTEX-13OVK-5019-SM-AN3ZL B1 Muscle Muscle - Skeletal 0011907 273 ChIP-Seq GTEX-13OVL-0003-SM-5CV8H B1 Blood Whole Blood 0013756 687 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OVL-0003-SM-5HJRX B1 Blood Whole Blood 0013756 687 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OVL-0003-SM-6WSD4 B1 Blood Whole Blood 0013756 687 BP-44613,BP-44617 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/15/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OVL-0006-SM-5O996 B1 7.5 Blood Whole Blood 0013756 687 BP-44602 RNA isolation_PAXgene Blood RNA (Manual) 10/15/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.957458 361742 0.984644 0.961118 0.802174 19665 1 76 0.00243793 151 0 1.06614e+08 0.0137687 303326 1.10927e+08 1.55355e+07 19674 5.29296e+07 0 0.182471 0.961118 0.770983 1.06614e+08 0.00441308 2.50884e+07 1.52937e+08 2.52088e+07 188 2.52376e+07 2.80814e+07 0.00342174 2.54764e+07 50.2355 0.00273447 0.964777 0 50.1197 GTEX-13OVL-0011-R10a-SM-5L3GS B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 669 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991492 436696 0.958465 0.993845 0.827292 23341 1 76 0.00207019 198 0 7.13629e+07 0.0410611 2.2896e+06 7.18049e+07 5.69456e+06 23361 3.55211e+07 0 0.131173 0.993845 0.8222 7.13629e+07 0.00280863 1.55885e+07 1.53795e+07 1.56545e+07 235 1.56428e+07 9.12634e+06 0.00243853 1.5751e+07 50.1722 0.0318864 0.996198 0 50.1055 GTEX-13OVL-0011-R11b-SM-5L3G7 B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 669 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989309 566507 0.939648 0.991606 0.718668 23660 1 76 0.00243758 200 0 8.4113e+07 0.0598436 944096 8.4825e+07 7.16544e+06 23698 4.18306e+07 0 0.22098 0.991606 0.712635 8.4113e+07 0.00315322 1.80436e+07 1.82211e+07 1.80663e+07 221 1.81355e+07 1.08021e+07 0.00279457 1.81558e+07 50.028 0.0111299 0.993902 0 50.0315 GTEX-13OVL-0011-R1a-SM-5L3H5 B1, A1 7.1 Brain Brain - Hippocampus 0001954 669 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991511 434659 0.958346 0.993972 0.81011 22964 1 76 0.00204372 203 0 6.74292e+07 0.0414266 2.83967e+06 6.78382e+07 5.39595e+06 22990 3.35572e+07 0 0.148236 0.993972 0.805227 6.74292e+07 0.00293892 1.47943e+07 1.72669e+07 1.47973e+07 210 1.47412e+07 6.91036e+06 0.00249021 1.50019e+07 50.4384 0.0418594 0.996434 0 50.0051 GTEX-13OVL-0011-R3b-SM-5L3I8 B1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 669 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991022 619345 0.955357 0.99348 0.815694 23332 1 76 0.00205277 267 0 7.42505e+07 0.0443075 3.38208e+06 7.47378e+07 6.03118e+06 23347 3.69535e+07 0 0.139662 0.99348 0.810376 7.42505e+07 0.00282633 1.61306e+07 2.33757e+07 1.61508e+07 263 1.60754e+07 7.85934e+06 0.00243859 1.63752e+07 50.4621 0.0452526 0.995938 0 50.0312 GTEX-13OVL-0011-R4b-SM-5L3HV B1, A1 6.1 Brain Brain - Amygdala 0001876 669 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991106 385642 0.958411 0.993807 0.833589 20462 1 76 0.0019232 144 0 5.14512e+07 0.0414516 4.96221e+06 5.17719e+07 4.1366e+06 20473 2.56023e+07 0 0.124822 0.993807 0.828427 5.14512e+07 0.0028612 1.12277e+07 1.97904e+07 1.12408e+07 171 1.1097e+07 3.43853e+06 0.00239092 1.15086e+07 50.9104 0.0958476 0.996508 0 50.0293 GTEX-13OVL-0011-R5b-SM-5L3FU B1, A1 8.9 Brain Brain - Caudate (basal ganglia) 0001873 669 BP-47251 RNA isolation_PAXgene Tissue miRNA 12/16/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99059 862691 0.946298 0.9928 0.783206 23905 1 76 0.00204892 267 0 8.31238e+07 0.0533686 3.50284e+06 8.37267e+07 7.11508e+06 23923 4.13849e+07 0 0.163091 0.9928 0.777567 8.31238e+07 0.00272361 1.78687e+07 3.96039e+07 1.77373e+07 266 1.77987e+07 8.37083e+06 0.00238552 1.79868e+07 50.2628 0.0418366 0.99501 0 49.8155 GTEX-13OVL-0011-R6a-SM-5L3G4 B1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 669 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991937 554813 0.952534 0.994071 0.806468 23838 1 76 0.00207115 198 0 7.67619e+07 0.0470104 3.00211e+06 7.72197e+07 5.93291e+06 23859 3.82151e+07 0 0.146066 0.994071 0.801687 7.67619e+07 0.00275501 1.66366e+07 2.15532e+07 1.66057e+07 254 1.66792e+07 9.68119e+06 0.00241235 1.67209e+07 50.0624 0.0388775 0.996206 0 49.9535 GTEX-13OVL-0011-R7a-SM-5P9GW B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 669 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.986772 1.10114e+06 0.952086 0.987265 0.798768 21582 1 76 0.00258776 369 0 1.01925e+08 0.0477595 9.24153e+06 1.0324e+08 3.44803e+06 21593 5.07732e+07 0 0.153318 0.987265 0.788596 1.01925e+08 0.0032454 2.11617e+07 7.92956e+07 2.20149e+07 354 2.16041e+07 6.45957e+06 0.00291642 2.16404e+07 50.042 0.0895153 0.987758 0 50.988 GTEX-13OVL-0011-R8a-SM-5L3HH B1, A1 6.5 Brain Brain - Hypothalamus 0001898 669 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991011 449830 0.962261 0.993565 0.83409 22792 1 76 0.00198285 268 0 7.19633e+07 0.037492 5.45622e+06 7.24293e+07 5.69111e+06 22807 3.58106e+07 0 0.128171 0.993565 0.828723 7.19633e+07 0.00288069 1.57514e+07 2.39661e+07 1.57953e+07 272 1.56763e+07 6.50259e+06 0.00243061 1.60345e+07 50.5649 0.0753316 0.99612 0 50.0696 GTEX-13OVL-0011-R9a-SM-5P9GX B1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 669 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991782 413167 0.96148 0.992117 0.812235 23510 1 76 0.00277864 293 0 9.5476e+07 0.0381904 3.0763e+06 9.62346e+07 3.16132e+06 23536 4.7542e+07 0 0.149245 0.992117 0.805833 9.5476e+07 0.00333354 2.10231e+07 1.66275e+07 2.14216e+07 318 2.11541e+07 1.23379e+07 0.00305599 2.13139e+07 50.1881 0.0319667 0.992453 0 50.4694 GTEX-13OVL-0126-SM-5L3GJ 1 B1 6 pieces; well trimmed; several hair follicles; <10% intradermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 844 1269 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990177 194948 0.973336 0.992536 0.778016 23947 1 76 0.00230259 148 0 7.10057e+07 0.0264078 347517 7.15396e+07 5.77566e+06 23979 3.53319e+07 0 0.19532 0.992536 0.772209 7.10057e+07 0.00314648 1.56343e+07 7.8477e+06 1.57034e+07 162 1.57332e+07 1.1821e+07 0.00272353 1.57625e+07 50.0465 0.00485769 0.994896 0 50.1103 GTEX-13OVL-0226-SM-5L3E9 1 B1 6 pieces; well trimmed; 20% intradermal fat 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 855 1258 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98724 247488 0.972745 0.99132 0.80634 23670 1 76 0.00318949 159 0 6.39184e+07 0.0270115 300479 6.44781e+07 6.88665e+06 23693 3.17418e+07 0 0.166405 0.99132 0.799341 6.39184e+07 0.00430057 1.39145e+07 6.99689e+06 1.39674e+07 144 1.40516e+07 1.15413e+07 0.00374275 1.40712e+07 50.0347 0.00466017 0.9954 0 50.0948 GTEX-13OVL-0326-SM-5IJCS 1 B1 2 pieces; 10 & 20% fibrovascular content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 864 1249 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988446 173892 0.975227 0.991338 0.831017 22370 1 76 0.0022566 141 0 6.18344e+07 0.0244455 277146 6.23747e+07 8.48146e+06 22387 3.07256e+07 0 0.14421 0.991338 0.823819 6.18344e+07 0.0040672 1.35537e+07 6.26795e+06 1.35958e+07 149 1.35741e+07 1.1579e+07 0.00315926 1.37514e+07 50.3243 0.00444324 0.99423 0 50.0775 GTEX-13OVL-0426-SM-5IFG6 1 B1 2 pieces; spermatogenesis 6.7 Testis Testis 0000473 868 1245 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987494 351487 0.921622 0.990608 0.719695 33139 1 76 0.00228746 152 0 8.14131e+07 0.0780054 619030 8.2185e+07 9.79227e+06 33199 4.04834e+07 0 0.201927 0.990608 0.712935 8.14131e+07 0.00356553 1.66761e+07 1.24449e+07 1.67245e+07 161 1.6825e+07 1.3693e+07 0.00292448 1.6808e+07 49.9747 0.00753215 0.993722 0 50.0724 GTEX-13OVL-0526-SM-5KLZQ 1 B1 2 pieces 7.8 Heart Heart - Left Ventricle 0006566 876 1237 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988765 158519 0.980047 0.991097 0.829873 22119 1 76 0.00365666 199 0 8.18079e+07 0.0197051 1.76166e+06 8.25428e+07 3.91834e+06 22136 4.07033e+07 0 0.150175 0.991097 0.822484 8.18079e+07 0.0045595 1.81178e+07 1.14029e+07 1.814e+07 213 1.82385e+07 1.44678e+07 0.00410701 1.81945e+07 49.9395 0.0213424 0.993428 0 50.0307 GTEX-13OVL-0626-SM-5KM13 1 B1 2 pieces; moderate congestion and hemorrhage 6.2 Lung Lung 0008952 881 1232 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.979653 169068 0.970574 0.98246 0.706917 24476 1 76 0.00428728 127 0 6.89577e+07 0.0291363 223048 7.01888e+07 3.62929e+06 24512 3.41981e+07 0 0.263657 0.98246 0.694518 6.89577e+07 0.00563955 1.52125e+07 7.54415e+06 1.52623e+07 144 1.52958e+07 9.03092e+06 0.00496148 1.53679e+07 50.1176 0.00317783 0.985268 0 50.0817 GTEX-13OVL-0826-SM-5L3GV 1 B1 4 fragmented pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 896 1217 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.981417 256245 0.974929 0.98392 0.828408 22601 1 76 0.0022855 144 0 6.18457e+07 0.0247318 301710 6.28564e+07 5.07672e+06 22615 3.07569e+07 0 0.14652 0.98392 0.815088 6.18457e+07 0.00326772 1.36316e+07 6.8632e+06 1.36988e+07 157 1.3705e+07 1.03732e+07 0.00277536 1.37788e+07 50.1342 0.00479999 0.986424 0 50.1229 GTEX-13OVL-1326-SM-5IJCZ 1 B1 2 pieces; well dissected; very small focal intimal calcifications 7.8 Blood Vessel Artery - Tibial 0007610 931 1182 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989785 180807 0.973504 0.992188 0.822188 21343 1 76 0.00216093 136 0 6.61472e+07 0.0261457 330717 6.6668e+07 8.2937e+06 21366 3.28989e+07 0 0.151316 0.992188 0.815765 6.61472e+07 0.00391063 1.41396e+07 5.40569e+06 1.42152e+07 152 1.41664e+07 1.23535e+07 0.00303366 1.43401e+07 50.3046 0.00496065 0.99459 0 50.1332 GTEX-13OVL-1426-SM-5IJC1 1 B1 2 pieces; 5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 914 1199 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991513 256785 0.983325 0.993814 0.869714 20320 1 76 0.00198055 200 0 8.49942e+07 0.0164557 744948 8.55232e+07 1.08945e+07 20335 4.23109e+07 0 0.113611 0.993814 0.864334 8.49942e+07 0.00354018 1.88348e+07 9.30169e+06 1.86562e+07 252 1.86818e+07 1.71959e+07 0.00275856 1.89988e+07 50.4206 0.00871048 0.996115 0 49.7617 GTEX-13OVL-1526-SM-5K7WA 1 B1 2 pieces; 10% external fat, <5% internal fat 7 Nerve Nerve - Tibial 0001323 939 1174 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983783 320012 0.963183 0.98643 0.729969 25374 1 76 0.00451905 203 0 9.65033e+07 0.0365501 381580 9.78308e+07 6.86585e+06 25425 4.78802e+07 0 0.233214 0.98643 0.720064 9.65033e+07 0.00545883 2.11137e+07 9.79392e+06 2.1237e+07 205 2.12696e+07 1.36789e+07 0.00498768 2.13328e+07 50.0742 0.00390041 0.989078 0 50.1456 GTEX-13OVL-1826-SM-5KLZR 2 B1 6 pieces; no active or chronic lesions 6 Kidney Kidney - Cortex 0001225 958 1155 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984122 179867 0.967728 0.987 0.815036 24427 1 76 0.00386768 199 0 7.78967e+07 0.032083 2.79795e+06 7.89226e+07 3.9783e+06 24451 3.86844e+07 0 0.152691 0.987 0.804441 7.78967e+07 0.00520211 1.70814e+07 1.30275e+07 1.70659e+07 220 1.71403e+07 8.62751e+06 0.00453295 1.72137e+07 50.1067 0.0354518 0.989879 0 49.9772 GTEX-13OVL-1926-SM-5KM14 1 B1 6 pieces; 3 with 20% submucosal stroma 6.1 Esophagus Esophagus - Muscularis 0004648 962 1151 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.982226 255130 0.970077 0.985317 0.815222 23473 1 76 0.00388143 268 0 8.74959e+07 0.0297552 1.83373e+06 8.87997e+07 4.17169e+06 23496 4.34584e+07 0 0.154854 0.985317 0.803253 8.74959e+07 0.00515637 1.90001e+07 8.86775e+06 1.9189e+07 272 1.9158e+07 9.83331e+06 0.0045169 1.92754e+07 50.1527 0.0206502 0.988409 0 50.2474 GTEX-13OVL-2726-SM-5J2MP 1 B1 6 pieces; well dissected muscularis 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 983 1130 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981031 276282 0.968513 0.985034 0.794852 23691 1 76 0.00439469 200 0 9.03782e+07 0.0313191 1.49404e+06 9.17513e+07 5.06227e+06 23723 4.48003e+07 0 0.173661 0.985034 0.782956 9.03782e+07 0.00621552 1.94203e+07 8.44501e+06 1.95432e+07 225 1.95676e+07 1.08255e+07 0.0053014 1.97292e+07 50.2056 0.0162836 0.989037 0 50.1578 GTEX-13OVL-2926-SM-5IFG3 1 B1 2 pieces; well trimmed 7.8 Salivary Gland Minor Salivary Gland 0006330 1021 1092 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.987607 228209 0.973786 0.990366 0.806094 22436 1 76 0.00251819 184 0 7.1136e+07 0.0241899 235964 7.1828e+07 8.12967e+06 22464 3.53246e+07 0 0.167692 0.990366 0.798328 7.1136e+07 0.0037589 1.63216e+07 1.94333e+07 1.63866e+07 180 1.64256e+07 1.13493e+07 0.00313682 1.64772e+07 50.0783 0.00328513 0.993125 0 50.0993 GTEX-13OVL-3026-SM-5IJF1 1 B1 2 pieces 7.4 Brain Brain - Cerebellum 0002037 1099 1014 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984659 572826 0.937911 0.986717 0.713962 25145 1 76 0.00506178 201 0 9.21998e+07 0.0617394 1.11269e+06 9.3441e+07 6.46567e+06 25184 4.57962e+07 0 0.223949 0.986717 0.704479 9.21998e+07 0.0053381 1.96582e+07 2.56688e+07 1.98987e+07 211 1.99553e+07 1.10683e+07 0.00519965 1.97796e+07 49.7788 0.011908 0.988776 0 50.304 GTEX-13OVL-3226-SM-5L3H8 2 B1 1 piece; mostly adenohypophysis; small amount of posterior lobe [labeled] and 4x1mm external fat 7.1 Pituitary Pituitary 0000007 1101 1012 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990873 355652 0.95707 0.99329 0.744727 24785 1 76 0.00231691 129 0 6.62633e+07 0.0427127 250696 6.67109e+07 5.13163e+06 24815 3.29636e+07 0 0.212343 0.99329 0.73973 6.62633e+07 0.00321781 1.38927e+07 9.23749e+06 1.3971e+07 146 1.40114e+07 1.00513e+07 0.00276626 1.40015e+07 49.9823 0.00375794 0.995708 0 50.1406 GTEX-13OW5-0003-SM-5GYAG B1 Blood Whole Blood 0013756 642 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OW5-0003-SM-5HJQ7 B1 Blood Whole Blood 0013756 642 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OW5-0003-SM-6WSCR B1 Blood Whole Blood 0013756 642 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OW5-0011-R11b-SM-5L3GG B1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 667 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.98864 467139 0.937987 0.991208 0.697402 23197 1 76 0.00262761 123 0 6.30418e+07 0.0615084 823801 6.36009e+07 4.96558e+06 23221 3.1323e+07 0 0.240585 0.991208 0.691271 6.30418e+07 0.00345644 1.35047e+07 1.24846e+07 1.35498e+07 139 1.36082e+07 7.70128e+06 0.00304095 1.35939e+07 49.9738 0.0129527 0.993777 0 50.0833 GTEX-13OW5-0011-R1b-SM-5L3GE B1, A1 6.3 Brain Brain - Hippocampus 0001954 667 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991261 368207 0.958672 0.993554 0.811073 23145 1 76 0.00232931 206 0 7.24943e+07 0.0410719 2.44515e+06 7.29647e+07 5.81366e+06 23172 3.60792e+07 0 0.1476 0.993554 0.805844 7.24943e+07 0.00316083 1.59457e+07 1.34374e+07 1.61524e+07 210 1.60589e+07 8.99879e+06 0.00274411 1.61951e+07 50.2113 0.0335114 0.995846 0 50.3221 GTEX-13OW5-0011-R3a-SM-5L3I5 B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 667 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990283 1.03623e+06 0.92934 0.9928 0.79884 23451 1 76 0.00244265 200 0 6.80065e+07 0.0703961 8.08353e+06 6.84997e+07 5.55621e+06 23464 3.38428e+07 0 0.130499 0.9928 0.793088 6.80065e+07 0.00327971 1.44918e+07 3.86483e+07 1.46253e+07 207 1.45749e+07 6.20163e+06 0.00286012 1.47248e+07 50.2558 0.118008 0.995317 0 50.2293 GTEX-13OW5-0011-R4b-SM-5L3HS B1, A1 6.9 Brain Brain - Amygdala 0001876 667 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99075 542243 0.960483 0.993243 0.824401 22966 1 76 0.00238143 267 0 7.73402e+07 0.0392078 5.80333e+06 7.78663e+07 6.43271e+06 22983 3.84839e+07 0 0.136082 0.993243 0.81883 7.73402e+07 0.00329463 1.68417e+07 2.35184e+07 1.70299e+07 261 1.69554e+07 8.20526e+06 0.00283689 1.70986e+07 50.2103 0.0745294 0.995735 0 50.2778 GTEX-13OW5-0011-R5b-SM-5L3FR B1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 667 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.988216 812097 0.952028 0.990527 0.79853 23537 1 76 0.0023978 268 0 8.74436e+07 0.0476888 5.59296e+06 8.82799e+07 6.89176e+06 23556 4.35254e+07 0 0.153498 0.990527 0.790965 8.74436e+07 0.00313244 1.88214e+07 4.00742e+07 1.87994e+07 282 1.8665e+07 8.82101e+06 0.00276426 1.91556e+07 50.6486 0.0633549 0.992838 0 49.9707 GTEX-13OW5-0011-R6b-SM-5O9BW B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 667 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985412 2.00582e+06 0.944745 0.987985 0.810044 25979 1 76 0.00382655 375 0 1.42621e+08 0.0549426 2.14001e+07 1.44355e+08 5.85899e+06 26013 7.08653e+07 0 0.134701 0.987985 0.800311 1.42621e+08 0.00490079 3.08031e+07 7.06179e+07 3.13433e+07 381 3.13006e+07 1.45705e+07 0.00436227 3.12103e+07 49.9278 0.148246 0.990557 0 50.4346 GTEX-13OW5-0011-R7a-SM-5O9C9 B1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 667 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986289 1.00458e+06 0.954842 0.988555 0.809785 23487 1 76 0.00381228 371 0 1.18851e+08 0.0449754 1.08975e+07 1.20227e+08 4.92522e+06 23503 5.91171e+07 0 0.145058 0.988555 0.800517 1.18851e+08 0.00471904 2.52772e+07 5.97879e+07 2.57832e+07 341 2.55841e+07 8.8128e+06 0.00426462 2.57082e+07 50.1209 0.0906408 0.990821 0 50.4955 GTEX-13OW5-0011-R8a-SM-5L3GQ B1, A1 6.5 Brain Brain - Hypothalamus 0001898 667 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991446 424172 0.957489 0.993769 0.834783 22542 1 76 0.00245847 200 0 6.67783e+07 0.0423427 5.76178e+06 6.7197e+07 5.33577e+06 22557 3.32459e+07 0 0.122706 0.993769 0.829582 6.67783e+07 0.00325145 1.4613e+07 1.99515e+07 1.47585e+07 229 1.46599e+07 5.58409e+06 0.00285403 1.48523e+07 50.3259 0.0857447 0.996092 0 50.2477 GTEX-13OW5-0011-R9b-SM-5O9CL B1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 667 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983839 568536 0.965832 0.986317 0.810951 24988 1 76 0.00373986 379 0 1.10522e+08 0.0338449 2.84346e+06 1.12056e+08 4.76138e+06 25015 5.48768e+07 0 0.154881 0.986317 0.799854 1.10522e+08 0.00481851 2.4496e+07 1.83391e+07 2.48287e+07 340 2.48232e+07 1.60782e+07 0.00427783 2.47663e+07 49.9427 0.0253755 0.988794 0 50.3372 GTEX-13OW5-0126-SM-5MR3A 0 B1 6 pieces, minimal dermal fat. Squamous epithelium is ~50microns. Moderate solar elastosis in upper dermis. 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 843 679 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 EXCLUDE 0.992652 163498 0.976471 0.993115 0.815647 23449 1 76 0.00285086 304 0 9.2833e+07 0.0232172 556539 9.34766e+07 3.32017e+06 23480 4.62833e+07 0 0.160825 0.993115 0.810032 9.2833e+07 0.00288444 2.03449e+07 9.2251e+06 2.04326e+07 268 2.03909e+07 1.61842e+07 0.00286764 2.04265e+07 50.0436 0.00595378 0.993579 0 50.1075 GTEX-13OW5-0126-SM-DTXFS 0 B1 6 pieces, minimal dermal fat. Squamous epithelium is ~50microns. Moderate solar elastosis in upper dermis. 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 843 679 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994262 893748 0.976749 0.99513 0.831736 23705 1 76 0.00201408 396 0 1.05785e+08 0.0228349 582751 1.06303e+08 5.24713e+06 23736 5.26905e+07 0 0.145013 0.99513 0.827685 1.05785e+08 0.00247846 2.3043e+07 1.09585e+07 2.31168e+07 338 2.32461e+07 1.97651e+07 0.00224607 2.30001e+07 49.734 0.00548198 0.995997 0 50.0799 GTEX-13OW5-0326-SM-5L3HK 0 B1 2 pieces, ~10% interstitial fat, rep. delinated 5.9 Muscle Muscle - Skeletal 0011907 851 671 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.992534 186358 0.981517 0.994683 0.866957 18763 1 76 0.00209065 114 0 5.95328e+07 0.0182984 809589 5.9851e+07 4.893e+06 18767 2.96554e+07 0 0.114559 0.994683 0.862348 5.95328e+07 0.00283579 1.30821e+07 6.48378e+06 1.31521e+07 138 1.31758e+07 1.22488e+07 0.00246241 1.31728e+07 49.9945 0.0135268 0.996833 0 50.1335 GTEX-13OW5-0626-SM-5J2N2 1 B1 2 pieces, no abnormalities 6.2 Thyroid Thyroid 0002046 877 645 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.979053 278499 0.968832 0.983422 0.802217 24909 1 76 0.00451419 170 0 9.29897e+07 0.0308407 497177 9.45573e+07 5.3224e+06 24941 4.60953e+07 0 0.166615 0.983422 0.788918 9.29897e+07 0.00636829 2.02106e+07 9.54095e+06 2.03118e+07 189 2.04194e+07 1.64775e+07 0.00543713 2.04866e+07 50.0822 0.00525795 0.987791 0 50.1249 GTEX-13OW5-0726-SM-5KLZK 2 B1 2 pieces, moderate congestion 5.9 Lung Lung 0008952 882 640 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.984807 129209 0.97762 0.987639 0.770785 23396 1 76 0.00417933 141 0 7.62008e+07 0.0220618 457298 7.71545e+07 3.87342e+06 23419 3.78329e+07 0 0.206835 0.987639 0.761257 7.62008e+07 0.00549829 1.69109e+07 7.83026e+06 1.70169e+07 161 1.70512e+07 1.2105e+07 0.00483692 1.70865e+07 50.0517 0.00592704 0.990471 0 50.1563 GTEX-13OW5-0826-SM-5J1NE 1 B1 6 pieces, minimal atherosis 6.9 Blood Vessel Artery - Aorta 0001496 888 634 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984894 361199 0.974375 0.987434 0.813202 23783 1 76 0.00423699 280 0 1.20455e+08 0.0252231 157756 1.21988e+08 7.23845e+06 23815 5.97764e+07 0 0.161173 0.987434 0.802983 1.20455e+08 0.00535168 2.61572e+07 1.32697e+07 2.6334e+07 307 2.63947e+07 2.26872e+07 0.0047929 2.64052e+07 50.0099 0.00129321 0.989973 0 50.1684 GTEX-13OW5-0926-SM-5L3GZ 1 B1 2 pieces, unusually congested 6.6 Heart Heart - Atrial Appendage 0006631 891 631 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990321 223316 0.984155 0.992493 0.830862 20216 1 76 0.00230357 151 0 6.76459e+07 0.0156288 2.90547e+06 6.81575e+07 5.72223e+06 20220 3.36619e+07 0 0.153293 0.992493 0.824625 6.76459e+07 0.00303711 1.4852e+07 1.29304e+07 1.47027e+07 172 1.48151e+07 1.05593e+07 0.00266953 1.48802e+07 50.1096 0.0426288 0.994666 0 49.7474 GTEX-13OW5-1126-SM-5J1NR 1 B1 2 pieces, mild-moderate interstitial fibrosis, chronic ischemic changes 6.1 Heart Heart - Left Ventricle 0006566 903 619 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.985986 123483 0.988677 0.988395 0.857566 18809 1 76 0.00434006 367 0 8.34681e+07 0.0112736 6.23736e+06 8.4448e+07 4.78966e+06 18814 4.1492e+07 0 0.131111 0.988395 0.847614 8.34681e+07 0.00538406 1.84009e+07 3.16235e+07 1.86596e+07 361 1.81886e+07 3.88708e+06 0.00486079 1.90218e+07 51.1196 0.0738603 0.990805 0 50.349 GTEX-13OW5-2226-SM-5L3HC 1 B1 2 pieces, gynecomastoid ductal (rep delineated) and stromal hyperplasia. Numerous ductal elements present, good specimen 6.7 Breast Breast - Mammary Tissue 0008367 963 559 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991059 157036 0.967859 0.993422 0.730171 23647 1 76 0.00239388 123 0 5.94018e+07 0.0318367 343803 5.97951e+07 4.72175e+06 23676 2.95437e+07 0 0.237688 0.993422 0.725368 5.94018e+07 0.00311449 1.30873e+07 5.63611e+06 1.30522e+07 130 1.30768e+07 8.96394e+06 0.00275333 1.31947e+07 50.2245 0.00574969 0.995786 0 49.9328 GTEX-13OW5-2326-SM-5L3HO 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 968 554 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991957 148431 0.980058 0.994242 0.839891 22243 1 76 0.00226944 155 0 6.16883e+07 0.0196474 376026 6.20456e+07 4.87463e+06 22261 3.0709e+07 0 0.140168 0.994242 0.835055 6.16883e+07 0.00305525 1.36493e+07 5.93174e+06 1.35958e+07 148 1.36214e+07 1.16305e+07 0.00266144 1.37542e+07 50.2425 0.00606048 0.996527 0 49.9018 GTEX-13OW5-2526-SM-5L3I1 2 B1 2 pieces, moderately autolyzed, evidence of spermatogenesis 5.8 Testis Testis 0000473 980 542 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990595 322196 0.925566 0.992557 0.717353 33864 1 76 0.00231213 283 0 1.01879e+08 0.0741032 1.35549e+06 1.02643e+08 8.57255e+06 33937 5.07353e+07 0 0.208212 0.992557 0.712014 1.01879e+08 0.00286182 2.09839e+07 1.50177e+07 2.09387e+07 260 2.10128e+07 1.56989e+07 0.00258643 2.10831e+07 50.0835 0.0132059 0.994518 0 49.9461 GTEX-13OW5-2626-SM-5MR3M 3 B1 6 pieces, mucosa moderately-markedly autolyzed, ~0.3mm, ~10-15% thickness 5.8 Colon Colon - Transverse 0001157 987 535 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.9917 150035 0.971622 0.992065 0.814842 23578 1 76 0.00287922 204 0 7.80424e+07 0.0280207 941167 7.86666e+07 2.90015e+06 23595 3.8897e+07 0 0.15678 0.992065 0.808376 7.80424e+07 0.00290312 1.69414e+07 8.23175e+06 1.71067e+07 211 1.70209e+07 1.19619e+07 0.00289117 1.70562e+07 50.0517 0.011964 0.99243 0 50.2427 GTEX-13OW5-2826-SM-5KM1G 2 B1 6 pieces, all muscularis, variably congested with foci of moderate autolysis 6 Colon Colon - Sigmoid 0001159 999 523 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986365 247398 0.968592 0.98901 0.787789 22667 1 76 0.00401291 154 0 7.56982e+07 0.0311994 783576 7.65394e+07 3.48421e+06 22689 3.75842e+07 0 0.180803 0.98901 0.779131 7.56982e+07 0.00542457 1.62727e+07 6.80637e+06 1.63903e+07 172 1.63821e+07 1.08872e+07 0.00471685 1.64711e+07 50.1355 0.0102375 0.991654 0 50.18 GTEX-13OW5-2926-SM-5IJF2 1 B1 1 piece, autolysis approached score 2; 5x2 focus of neurohypophysis delineated; rest is adenohypophysis 7.1 Pituitary Pituitary 0000007 1037 485 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98759 231619 0.968734 0.989464 0.792873 25191 1 76 0.004735 162 0 8.99987e+07 0.0309702 192051 9.0957e+07 5.77627e+06 25223 4.47444e+07 0 0.17586 0.989464 0.784519 8.99987e+07 0.00491942 1.74503e+07 8.7416e+06 1.75805e+07 182 1.76351e+07 1.73039e+07 0.00482703 1.75473e+07 49.8753 0.00211145 0.991337 0 50.1859 GTEX-13OW5-3126-SM-5MR3Y 1 B1 2 pieces, no abnormalities 7 Brain Brain - Cerebellum 0002037 1042 480 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.991605 722698 0.933746 0.992102 0.708912 24366 1 76 0.00308858 199 0 9.42074e+07 0.0658827 1.9778e+06 9.49573e+07 3.65508e+06 24401 4.69387e+07 0 0.224834 0.992102 0.703313 9.42074e+07 0.00306542 2.01085e+07 3.42711e+07 2.02189e+07 250 2.02045e+07 1.04536e+07 0.003077 2.01758e+07 49.9645 0.0208283 0.9926 0 50.1369 GTEX-13OW6-0002-SM-5GYAF C1 Blood Whole Blood 0013756 443 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OW6-0002-SM-5HJPU C1 Blood Whole Blood 0013756 443 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OW6-0002-SM-6WSAM C1 Blood Whole Blood 0013756 443 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OW6-0005-SM-5NQ9Z C1 8.3 Blood Whole Blood 0013756 443 BP-44889 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.981969 513684 0.972701 0.985024 0.75236 21329 1 76 0.0025469 152 0 9.74194e+07 0.0262167 118808 9.89005e+07 1.34905e+07 21351 4.8406e+07 0 0.22034 0.985024 0.741093 9.74194e+07 0.00554939 2.19609e+07 7.39779e+07 2.2222e+07 174 2.22719e+07 2.02565e+07 0.00404348 2.22102e+07 49.9306 0.00120129 0.98808 0 50.2954 GTEX-13OW6-0011-R10a-SM-5L3HE C1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 457 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991513 1.00305e+06 0.949848 0.993769 0.816601 24649 1 76 0.00208245 373 0 1.09029e+08 0.0497787 3.52425e+06 1.09713e+08 9.22432e+06 24674 5.42717e+07 0 0.133247 0.993769 0.811513 1.09029e+08 0.00283646 2.35245e+07 3.25453e+07 2.36096e+07 340 2.35995e+07 1.28556e+07 0.0024586 2.37709e+07 50.181 0.0321224 0.996026 0 50.0902 GTEX-13OW6-0011-R11a-SM-5L3H2 C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 457 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989825 485262 0.947917 0.992116 0.735985 24032 1 76 0.0024255 271 0 9.67968e+07 0.0515956 746512 9.7566e+07 7.77624e+06 24065 4.81317e+07 0 0.211932 0.992116 0.730182 9.67968e+07 0.00319237 2.09233e+07 1.49765e+07 2.09639e+07 271 2.1027e+07 1.27292e+07 0.00280805 2.10622e+07 50.0418 0.00765135 0.994408 0 50.0485 GTEX-13OW6-0011-R1a-SM-5L3HQ C1, A1 7.1 Brain Brain - Hippocampus 0001954 457 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991734 457846 0.956623 0.994027 0.817612 23434 1 76 0.00203218 204 0 7.14709e+07 0.0430108 3.07939e+06 7.19003e+07 5.70066e+06 23449 3.55718e+07 0 0.139011 0.994027 0.812729 7.14709e+07 0.00284594 1.56662e+07 1.58889e+07 1.56956e+07 227 1.5644e+07 8.64373e+06 0.00243812 1.587e+07 50.3585 0.0428286 0.996321 0 50.0469 GTEX-13OW6-0011-R1a-SM-DG7EP-HP2_A C1, A1 Brain Brain - Hippocampus 0001954 457 DroNc-seq GTEX-13OW6-0011-R1a-SM-DG7EP-HP2_B C1, A1 Brain Brain - Hippocampus 0001954 457 DroNc-seq GTEX-13OW6-0011-R2a-SM-5L3HG C1, A1 6.5 Brain Brain - Substantia nigra 0002038 457 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991361 288456 0.963113 0.993563 0.825836 23009 1 76 0.00207707 159 0 6.4824e+07 0.0365455 2.54094e+06 6.5244e+07 5.07836e+06 23030 3.22722e+07 0 0.137277 0.993563 0.82052 6.4824e+07 0.00281406 1.43163e+07 1.22331e+07 1.43622e+07 195 1.43348e+07 8.04107e+06 0.00244475 1.44792e+07 50.2505 0.0389452 0.995765 0 50.0801 GTEX-13OW6-0011-R4a-SM-5O9DX C1, A1 5.9 Brain Brain - Amygdala 0001876 457 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986076 797115 0.96132 0.988911 0.838795 23232 1 76 0.00324753 371 0 1.09326e+08 0.0384828 1.00232e+07 1.10552e+08 4.48324e+06 23247 5.43074e+07 0 0.122525 0.988911 0.829493 1.09326e+08 0.00440737 2.36389e+07 3.72301e+07 2.42517e+07 405 2.38844e+07 8.52627e+06 0.00382579 2.42523e+07 50.3822 0.0906651 0.991747 0 50.6398 GTEX-13OW6-0011-R5a-SM-5O9BK C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 457 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986721 1.50583e+06 0.938185 0.988963 0.764119 26899 1 76 0.00344181 373 0 1.28922e+08 0.0614395 4.66347e+06 1.30361e+08 5.19712e+06 26943 6.4079e+07 0 0.174066 0.988963 0.755685 1.28922e+08 0.00438818 2.74644e+07 5.48238e+07 2.75781e+07 344 2.76899e+07 1.41073e+07 0.00391392 2.76327e+07 49.9483 0.0357736 0.991205 0 50.1033 GTEX-13OW6-0011-R6b-SM-5L3GR C1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 457 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990991 586089 0.950234 0.993443 0.793898 24738 1 76 0.0021742 269 0 8.49816e+07 0.0492754 2.52375e+06 8.55425e+07 7.19679e+06 24763 4.22809e+07 0 0.156336 0.993443 0.788693 8.49816e+07 0.00300807 1.83781e+07 1.95101e+07 1.84961e+07 268 1.85231e+07 1.12178e+07 0.00259011 1.85499e+07 50.0362 0.0295029 0.995895 0 50.1599 GTEX-13OW6-0011-R7b-SM-5L3H4 C1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 457 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991748 511988 0.95486 0.993983 0.813193 22880 1 76 0.00203085 200 0 6.98457e+07 0.044822 3.1642e+06 7.02684e+07 5.07254e+06 22897 3.47754e+07 0 0.141667 0.993983 0.8083 6.98457e+07 0.00275902 1.51683e+07 2.14088e+07 1.51944e+07 238 1.51804e+07 7.67232e+06 0.00239412 1.53345e+07 50.2525 0.0450302 0.996219 0 50.043 GTEX-13OW6-0011-R8a-SM-5L3GF C1, A1 7.7 Brain Brain - Hypothalamus 0001898 457 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99098 486594 0.953562 0.993355 0.800232 24882 1 76 0.00216553 270 0 8.19159e+07 0.045925 2.19282e+06 8.24639e+07 6.83121e+06 24909 4.07575e+07 0 0.15333 0.993355 0.794914 8.19159e+07 0.00298154 1.78932e+07 1.65194e+07 1.79445e+07 262 1.79794e+07 1.11796e+07 0.00257256 1.80394e+07 50.0833 0.0265913 0.99573 0 50.0717 GTEX-13OW6-0126-SM-5IJGM 1 C1 2 pieces; spermatogenesis present, some hyalinized tubules 6.7 Testis Testis 0000473 524 1315 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986177 323053 0.941248 0.987799 0.719794 34584 1 76 0.00471006 280 0 1.2144e+08 0.0584297 812047 1.2294e+08 8.17716e+06 34670 6.03624e+07 0 0.221454 0.987799 0.711011 1.2144e+08 0.00488994 2.58825e+07 1.51668e+07 2.60428e+07 273 2.61167e+07 1.80838e+07 0.00479985 2.59919e+07 49.8803 0.00660523 0.989421 0 50.1543 GTEX-13OW6-0226-SM-5J1NB 1 C1 2 pieces; 20% and 50% attached (predominant) and internal fat with focus of chronic inflammation and vessel 7.8 Nerve Nerve - Tibial 0001323 548 1292 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988782 223732 0.970206 0.990612 0.785634 24799 1 76 0.00422991 176 0 8.87772e+07 0.0290261 187489 8.96186e+07 4.91289e+06 24840 4.41209e+07 0 0.184572 0.990612 0.778258 8.87772e+07 0.00485912 1.9484e+07 7.86798e+06 1.95487e+07 191 1.95843e+07 1.54108e+07 0.00454394 1.96047e+07 50.026 0.00209208 0.992441 0 50.0829 GTEX-13OW6-0326-SM-5L3H9 1 C1 2 pieces; no adherent fat 7.1 Blood Vessel Artery - Tibial 0007610 542 1298 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990616 239369 0.973957 0.99305 0.816373 21847 1 76 0.00216739 156 0 7.24808e+07 0.0257319 229595 7.2988e+07 6.04948e+06 21863 3.60611e+07 0 0.157583 0.99305 0.8107 7.24808e+07 0.00309943 1.55577e+07 5.89573e+06 1.56985e+07 170 1.56851e+07 1.28903e+07 0.00263227 1.57358e+07 50.0807 0.00314565 0.995484 0 50.2253 GTEX-13OW6-0426-SM-5L3HM 1 C1 6 pieces; small amount of external/internal fat, epidermis is 49.3 um 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 558 1283 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.992075 170349 0.973293 0.994183 0.800438 23025 1 76 0.00217401 212 0 6.89559e+07 0.0264424 233654 6.93594e+07 5.54315e+06 23052 3.43385e+07 0 0.172855 0.994183 0.795782 6.89559e+07 0.00286337 1.49369e+07 7.5925e+06 1.49099e+07 164 1.49524e+07 1.24292e+07 0.00251796 1.50252e+07 50.1213 0.00336874 0.99629 0 49.9548 GTEX-13OW6-0526-SM-5L3HY 1 C1 2 pieces; 1 piece includes 30% fibrovascular tissue, 2nd includes 20% connective tissue, vessels, and nerves; focus of fibrinoid necrosis of vessel walls surrounded by lymphohistiocytic infiltrate 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 561 1281 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99093 167683 0.976128 0.993347 0.826447 21354 1 76 0.00216036 125 0 5.38368e+07 0.0235497 155184 5.41974e+07 4.30047e+06 21368 2.67866e+07 0 0.149682 0.993347 0.820948 5.38368e+07 0.00317885 1.17368e+07 4.56244e+06 1.18274e+07 128 1.18249e+07 1.02242e+07 0.00266837 1.18609e+07 50.076 0.00286331 0.995764 0 50.1922 GTEX-13OW6-0626-SM-5L3IB 1 C1 2 pieces; small amount of internal fat 7.7 Muscle Muscle - Skeletal 0011907 563 1279 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99232 167642 0.984178 0.994344 0.870973 18793 1 76 0.00180808 127 0 6.56574e+07 0.0156027 502291 6.60309e+07 5.56611e+06 18799 3.27133e+07 0 0.113206 0.994344 0.866046 6.56574e+07 0.0024125 1.42928e+07 8.24721e+06 1.42295e+07 155 1.42191e+07 1.41204e+07 0.00210968 1.44253e+07 50.36 0.00760691 0.996368 0 49.8889 GTEX-13OW6-0726-SM-5L3FX 1 C1 2 pieces; 5% and 20% interspersed fat and vessels, some nodularity 6.8 Thyroid Thyroid 0002046 605 1238 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990326 263497 0.966932 0.992796 0.732098 24605 1 76 0.00235414 165 0 8.19298e+07 0.032785 268818 8.25244e+07 6.72887e+06 24650 4.07496e+07 0 0.234834 0.992796 0.726823 8.19298e+07 0.00321631 1.7929e+07 7.41529e+06 1.79772e+07 185 1.80369e+07 1.20002e+07 0.00278415 1.80549e+07 50.025 0.00325744 0.995266 0 50.0671 GTEX-13OW6-0826-SM-5L3GA 1 C1 2 pieces; some congestion/hemorrhage and emphysematous change 8.2 Lung Lung 0008952 608 1236 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991373 195709 0.975512 0.993625 0.78606 22704 1 76 0.00233547 136 0 7.10192e+07 0.0240379 126020 7.14749e+07 5.69455e+06 22733 3.53398e+07 0 0.189452 0.993625 0.781048 7.10192e+07 0.003081 1.58032e+07 6.14031e+06 1.58355e+07 160 1.58744e+07 1.25963e+07 0.00270739 1.59152e+07 50.0642 0.00176314 0.995876 0 50.051 GTEX-13OW6-0926-SM-5L3GM 1 C1 2 pieces; ~ 20% and 50% internal fat and fibrous tissue, patchy wavy fibers and contraction bands 7.9 Heart Heart - Atrial Appendage 0006631 611 1233 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991247 236575 0.978188 0.993884 0.811834 21674 1 76 0.00203699 130 0 6.46934e+07 0.0215046 999447 6.50915e+07 4.9734e+06 21693 3.21885e+07 0 0.166354 0.993884 0.806869 6.46934e+07 0.00289483 1.41894e+07 1.00956e+07 1.41966e+07 161 1.41702e+07 1.03979e+07 0.00246477 1.43715e+07 50.3527 0.0153545 0.996521 0 50.0128 GTEX-13OW6-1126-SM-5L3HL 1 C1 2 pieces; one piece with focus of interstitial fibrosis and scarring (outlined), myocyte hypertrophy 6.6 Heart Heart - Left Ventricle 0006566 613 1232 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991691 246451 0.976335 0.994132 0.838237 20327 1 76 0.00187491 263 0 6.93947e+07 0.0235687 3.58247e+06 6.98043e+07 5.44573e+06 20335 3.4558e+07 0 0.138098 0.994132 0.833318 6.93947e+07 0.00271058 1.52731e+07 2.31888e+07 1.51839e+07 257 1.51961e+07 6.56744e+06 0.00229172 1.5411e+07 50.351 0.0513216 0.996573 0 49.8536 GTEX-13OW6-1426-SM-5L3EU 1 C1 6 pieces; focal fibrovascular tissue and nerves (less than 10%) 6.1 Esophagus Esophagus - Muscularis 0004648 620 1227 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986578 143221 0.969786 0.990481 0.744945 22768 1 76 0.00329379 112 0 5.93556e+07 0.0299757 350791 5.9926e+07 5.91893e+06 22792 2.94819e+07 0 0.224841 0.990481 0.737854 5.93556e+07 0.00415889 1.28655e+07 5.21738e+06 1.28805e+07 126 1.29253e+07 8.62725e+06 0.00372464 1.30315e+07 50.2046 0.00585374 0.994384 0 50.0292 GTEX-13OW6-1526-SM-5L3HX 1 C1 6 pieces; calcific atherosclerosis 7.7 Blood Vessel Artery - Aorta 0001496 622 1226 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990181 179547 0.974996 0.992429 0.818299 21692 1 76 0.0023465 134 0 6.59067e+07 0.0244321 134436 6.64095e+07 5.33435e+06 21701 3.27673e+07 0 0.156697 0.992429 0.812104 6.59067e+07 0.0031731 1.41574e+07 5.58941e+06 1.42047e+07 150 1.41919e+07 1.26199e+07 0.00275887 1.43166e+07 50.2187 0.00202435 0.994678 0 50.0834 GTEX-13OW6-1626-SM-5IJD5 1 C1 6 pieces; attached small amount of external fat and fibrovascuar tissue and nerves 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 623 1226 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988157 202926 0.969033 0.991196 0.747919 23248 1 76 0.00233165 135 0 7.03925e+07 0.0307025 218828 7.10177e+07 9.30244e+06 23286 3.49791e+07 0 0.221114 0.991196 0.741335 7.03925e+07 0.00398162 1.5242e+07 6.38596e+06 1.52907e+07 151 1.52898e+07 1.09317e+07 0.0031541 1.54493e+07 50.2595 0.00308132 0.994235 0 50.0798 GTEX-13OW6-1726-SM-5IJGI 1 C1 2 pieces; small amount of adherent fat 6.9 Adrenal Gland Adrenal Gland 0002369 626 1223 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986063 399264 0.965336 0.988125 0.776341 23830 1 76 0.00473197 271 0 9.86708e+07 0.034425 1.57921e+06 9.98566e+07 6.71252e+06 23865 4.90306e+07 0 0.188995 0.988125 0.767122 9.86708e+07 0.00509719 2.11281e+07 1.6247e+07 2.14393e+07 261 2.14685e+07 1.34826e+07 0.0049142 2.12988e+07 49.8015 0.0158148 0.990188 0 50.3655 GTEX-13OW6-1826-SM-5N9F9 1 C1 6 pieces; mildly congested renal cortex, fibrosis 5.7 Kidney Kidney - Cortex 0001225 629 1221 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.984002 1.0755e+06 0.952377 0.98578 0.803054 23491 1 76 0.00395611 367 0 9.74755e+07 0.0474363 3.97315e+06 9.88816e+07 5.44096e+06 23511 4.83258e+07 0 0.149323 0.98578 0.791635 9.74755e+07 0.00428017 2.10344e+07 4.78575e+07 2.11418e+07 373 2.10868e+07 7.963e+06 0.00411785 2.12609e+07 50.2056 0.0401809 0.987558 0 50.1273 GTEX-13OW6-2126-SM-5N9GL 2 C1 6 pieces; full thickness sections, variably autolyzed mucosa, thin rim of adherent fat 5.7 Colon Colon - Transverse 0001157 633 1219 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.985056 362950 0.967918 0.98632 0.774771 25747 1 76 0.00445027 207 0 9.67489e+07 0.0300152 570104 9.80908e+07 5.07755e+06 25782 4.79112e+07 0 0.193147 0.98632 0.764172 9.67489e+07 0.00457983 2.11785e+07 1.09140e+07 2.12168e+07 238 2.11963e+07 1.46111e+07 0.00451497 2.13234e+07 50.1494 0.005812 0.987584 0 50.0452 GTEX-13OW6-2226-SM-5N9FL 2 C1 6 pieces; predominantly muscularis with some residual mucosa (not target, some outlined) 5.7 Colon Colon - Sigmoid 0001159 636 1217 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98477 385269 0.964981 0.986178 0.762054 24895 1 76 0.00414794 205 0 9.78378e+07 0.0348073 739321 9.92091e+07 5.40034e+06 24932 4.85062e+07 0 0.202927 0.986178 0.751521 9.78378e+07 0.00443152 2.10234e+07 9.52187e+06 2.11013e+07 250 2.10284e+07 1.29922e+07 0.00428953 2.12321e+07 50.2409 0.00745215 0.987586 0 50.0924 GTEX-13OW6-2426-SM-5K7WO 1 C1 2 pieces; 15% and 30% of fibrovascular and smooth muscle tissue 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 641 1213 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990548 144518 0.976828 0.992921 0.81927 23350 1 76 0.00262173 165 0 7.75156e+07 0.022859 371501 7.80683e+07 1.45393e+07 23374 3.85791e+07 0 0.157558 0.992921 0.81347 7.75156e+07 0.00376175 1.71769e+07 8.79725e+06 1.71893e+07 192 1.71956e+07 1.30454e+07 0.00319038 1.73476e+07 50.2201 0.00475867 0.995294 0 50.0181 GTEX-13OW6-2526-SM-5IJEC 1 C1 6 pieces; congestion; essentially well preserved full thickness sections 6.7 Stomach Stomach 0000945 642 1214 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.968006 192076 0.983819 0.969696 0.85036 21851 1 76 0.00439511 411 0 9.19324e+07 0.015609 515673 9.48055e+07 6.17951e+06 21870 4.57208e+07 0 0.133459 0.969696 0.82459 9.19324e+07 0.00457207 2.12829e+07 1.32122e+08 2.18267e+07 293 2.18349e+07 2.5868e+07 0.00448343 2.14301e+07 49.5321 0.00543928 0.971385 0 50.6307 GTEX-13OW6-2626-SM-5IFF2 2 C1 2 pieces; congestion and accentuation of portal triads 6.8 Liver Liver 0001114 643 1213 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990141 394910 0.960609 0.992629 0.763661 22101 1 76 0.00221623 154 0 7.9712e+07 0.0392373 906494 8.03039e+07 8.56874e+06 22128 3.967e+07 0 0.196948 0.992629 0.758032 7.9712e+07 0.00348826 1.70105e+07 2.22197e+07 1.71919e+07 200 1.71334e+07 1.12729e+07 0.00285065 1.72558e+07 50.1779 0.0112883 0.995117 0 50.2652 GTEX-13OW6-2726-SM-5J2OE 1 C1 6 pieces; hair bearing skin with 5 to 10% external/internal fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 646 1211 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983317 196654 0.973286 0.987274 0.744766 24458 1 76 0.00444384 183 0 8.60567e+07 0.0264559 245296 8.7166e+07 4.83074e+06 24509 4.27055e+07 0 0.228519 0.987274 0.735289 8.60567e+07 0.0061769 1.88507e+07 9.10362e+06 1.892e+07 166 1.90385e+07 1.36369e+07 0.0053069 1.90509e+07 50.0162 0.00281412 0.991232 0 50.0917 GTEX-13OW6-2926-SM-5KM29 1 C1 4 pieces; Purkinje cells well visualized 6.5 Brain Brain - Cerebellum 0002037 651 1207 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985474 326069 0.941516 0.987909 0.700128 24106 1 76 0.00408516 133 0 7.83209e+07 0.0581733 680796 7.92795e+07 3.90561e+06 24137 3.89062e+07 0 0.241388 0.987909 0.691663 7.83209e+07 0.00517766 1.67733e+07 1.53522e+07 1.69336e+07 165 1.6968e+07 9.12766e+06 0.00463006 1.69174e+07 49.9254 0.00858729 0.990344 0 50.2378 GTEX-13OW6-3026-SM-5J2MI 1 C1 4 pieces 6.5 Brain Brain - Cortex 0001870 654 1204 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.982835 695307 0.943973 0.986902 0.796302 24405 1 76 0.00427934 199 0 8.23496e+07 0.055636 1.86917e+06 8.34426e+07 4.34826e+06 24425 4.08745e+07 0 0.147671 0.986902 0.785872 8.23496e+07 0.00599332 1.76287e+07 2.78275e+07 1.78547e+07 208 1.78925e+07 1.02028e+07 0.0051328 1.78991e+07 50.0093 0.0224007 0.990969 0 50.3185 GTEX-13OW6-3126-SM-5L3IA 1 C1 1 piece: adenohypophysis and neurohypophysis 7.7 Pituitary Pituitary 0000007 655 1204 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991125 225746 0.960791 0.993293 0.735957 24805 1 76 0.00230164 125 0 6.46436e+07 0.0389572 235960 6.50801e+07 5.34836e+06 24844 3.21763e+07 0 0.224835 0.993293 0.731021 6.46436e+07 0.00299659 1.38098e+07 8.161e+06 1.38172e+07 139 1.38642e+07 9.9283e+06 0.00264836 1.38898e+07 50.0462 0.00362568 0.995461 0 50.0134 GTEX-13OW7-0001-SM-5GYA6 C1 Blood Whole Blood 0013756 2029 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OW7-0001-SM-5HJRV C1 Blood Whole Blood 0013756 2029 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13OW7-0001-SM-6WSD2 C1 Blood Whole Blood 0013756 2029 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-6066 11/08/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OW7-0011-R10a-SM-5L3H3 C1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 610 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991253 512840 0.95439 0.993629 0.833606 23215 1 76 0.00216126 268 0 7.78066e+07 0.0453221 3.74254e+06 7.83055e+07 6.43069e+06 23231 3.8726e+07 0 0.120784 0.993629 0.828295 7.78066e+07 0.00302008 1.68474e+07 1.9831e+07 1.70944e+07 280 1.70016e+07 8.53548e+06 0.00258964 1.71126e+07 50.1627 0.0477941 0.996005 0 50.3638 GTEX-13OW7-0011-R10a-SM-AHZN6 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 610 ChIP-Seq GTEX-13OW7-0011-R10a-SM-CYKQU C1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 610 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 RIP-Seq GTEX-13OW7-0011-R11a-SM-5O9DY C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 610 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985086 848665 0.942411 0.987588 0.730296 25031 1 76 0.00375143 372 0 1.23445e+08 0.0571833 1.9798e+06 1.24997e+08 5.04926e+06 25077 6.12647e+07 0 0.212115 0.987588 0.721232 1.23445e+08 0.00472424 2.6507e+07 2.49452e+07 2.66161e+07 337 2.67693e+07 1.40762e+07 0.0042366 2.66348e+07 49.874 0.0158388 0.990089 0 50.1027 GTEX-13OW7-0011-R1b-SM-5L3HF C1, A1 6.8 Brain Brain - Hippocampus 0001954 610 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990232 665455 0.942854 0.992933 0.801755 22933 1 76 0.00220049 183 0 6.40589e+07 0.0569588 4.94137e+06 6.45149e+07 4.95722e+06 22949 3.18624e+07 0 0.141099 0.992933 0.796088 6.40589e+07 0.00320168 1.38218e+07 2.68712e+07 1.39037e+07 207 1.37587e+07 4.68764e+06 0.00269972 1.41411e+07 50.6853 0.0765927 0.995633 0 50.1478 GTEX-13OW7-0011-R3a-SM-5O9DA C1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 610 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985714 1.2784e+06 0.949826 0.988631 0.815331 23579 1 76 0.00354137 369 0 1.13068e+08 0.049908 9.39305e+06 1.14368e+08 4.66985e+06 23599 5.61695e+07 0 0.134495 0.988631 0.806061 1.13068e+08 0.00466347 2.41429e+07 5.58355e+07 2.454e+07 370 2.44805e+07 8.90137e+06 0.00410077 2.44883e+07 50.008 0.08213 0.991548 0 50.4078 GTEX-13OW7-0011-R4b-SM-5O9CX C1, A1 5.8 Brain Brain - Amygdala 0001876 610 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984551 731011 0.965514 0.987663 0.844107 23035 1 76 0.00351513 368 0 1.12699e+08 0.034331 1.32559e+07 1.14107e+08 5.05308e+06 23054 5.59279e+07 0 0.121407 0.987663 0.833693 1.12699e+08 0.00470508 2.44083e+07 3.90817e+07 2.52178e+07 421 2.48647e+07 7.20556e+06 0.00410823 2.50481e+07 50.1838 0.116171 0.990774 0 50.8156 GTEX-13OW7-0011-R5b-SM-5O9DM C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 610 BP-47984 RNA isolation_PAXgene Tissue miRNA 01/07/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98728 1.42893e+06 0.948972 0.989501 0.795544 25770 1 76 0.00344901 374 0 1.47833e+08 0.0507149 9.33426e+06 1.49401e+08 5.98751e+06 25799 7.35111e+07 0 0.153428 0.989501 0.787192 1.47833e+08 0.00434602 3.1632e+07 6.69762e+07 3.19181e+07 355 3.18091e+07 1.36894e+07 0.00389651 3.20434e+07 50.1835 0.0624778 0.991722 0 50.2251 GTEX-13OW7-0011-R8b-SM-5L3HR C1, A1 6.7 Brain Brain - Hypothalamus 0001898 610 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990674 428725 0.957203 0.993202 0.816305 24344 1 76 0.00223246 202 0 7.38802e+07 0.0424556 3.26801e+06 7.43859e+07 5.80708e+06 24362 3.67497e+07 0 0.140899 0.993202 0.810756 7.38802e+07 0.00311959 1.62051e+07 1.4297e+07 1.62562e+07 230 1.62466e+07 8.74353e+06 0.0026749 1.63904e+07 50.2203 0.0439332 0.995731 0 50.0788 GTEX-13OW7-0126-SM-5MR3B 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 802 897 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992999 184972 0.97278 0.993459 0.784233 24800 1 76 0.00279481 216 0 9.05983e+07 0.0269758 382471 9.11948e+07 3.45824e+06 24831 4.51582e+07 0 0.188547 0.993459 0.779104 9.05983e+07 0.00285347 1.99514e+07 9.4142e+06 2.00536e+07 246 1.99859e+07 1.53109e+07 0.00282412 2.00604e+07 50.093 0.004194 0.99392 0 50.1277 GTEX-13OW7-0226-SM-5MR3N 0 C1 2 pieces, fibro-fascial tissue is ~15-20% total, rep delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 805 895 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992138 148662 0.973495 0.992617 0.788334 23764 1 76 0.00281988 210 0 7.98835e+07 0.0261855 493254 8.04777e+07 2.9711e+06 23793 3.98201e+07 0 0.185161 0.992617 0.782514 7.98835e+07 0.00281181 1.75617e+07 8.60736e+06 1.76478e+07 207 1.75851e+07 1.30885e+07 0.00281585 1.76615e+07 50.1083 0.00612908 0.993097 0 50.1224 GTEX-13OW7-0326-SM-5J1MP 0 C1 2 pieces, ~10-15% interstitial fat; rep delineated 8.2 Muscle Muscle - Skeletal 0011907 807 893 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.990527 205594 0.982563 0.992124 0.859033 20835 1 76 0.00369956 269 0 1.07053e+08 0.0171965 1.08057e+06 1.07903e+08 5.61879e+06 20845 5.33112e+07 0 0.12353 0.992124 0.852267 1.07053e+08 0.00421298 2.31045e+07 1.51142e+07 2.32196e+07 273 2.31748e+07 2.18428e+07 0.00395586 2.33104e+07 50.1458 0.0100143 0.99372 0 50.1242 GTEX-13OW7-0426-SM-5K7VK 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 809 891 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985486 231308 0.972042 0.987856 0.73937 24490 1 76 0.00461908 184 0 8.97447e+07 0.0276986 264544 9.08479e+07 6.30028e+06 24532 4.4591e+07 0 0.232672 0.987856 0.730392 8.97447e+07 0.00512169 1.96172e+07 9.95198e+06 1.96957e+07 180 1.97583e+07 1.41649e+07 0.00486978 1.9758e+07 49.9997 0.00291194 0.990227 0 50.0999 GTEX-13OW7-0526-SM-5J1N2 0 C1 2 pieces, excellent clean specimens 6.8 Nerve Nerve - Tibial 0001323 838 863 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987801 180952 0.969065 0.989729 0.785888 24933 1 76 0.00411193 221 0 1.00483e+08 0.0306688 342227 1.01526e+08 5.9305e+06 24977 4.99345e+07 0 0.183176 0.989729 0.777816 1.00483e+08 0.00498569 2.20368e+07 9.42996e+06 2.21296e+07 252 2.21057e+07 1.63604e+07 0.00454796 2.22491e+07 50.1617 0.00337084 0.991657 0 50.105 GTEX-13OW7-0626-SM-5K7UD 0 C1 2 pieces, excellent clean specimens; focal Monckeberg medial sclerosis delineated; no significant atherosis noted 8.1 Blood Vessel Artery - Tibial 0007610 839 862 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.98534 183348 0.971729 0.987812 0.800588 22381 1 76 0.00442975 158 0 8.13954e+07 0.0278674 256008 8.23996e+07 5.6232e+06 22408 4.04391e+07 0 0.171141 0.987812 0.79083 8.13954e+07 0.00502198 1.73529e+07 6.39556e+06 1.75115e+07 165 1.75269e+07 1.49433e+07 0.00472512 1.75261e+07 49.9988 0.00310691 0.990284 0 50.2275 GTEX-13OW7-0826-SM-5L3EL 1 C1 2 pieces, no abnmormalities 6.3 Thyroid Thyroid 0002046 882 821 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98057 397115 0.95397 0.985194 0.725646 23895 1 76 0.00329768 124 0 6.1036e+07 0.0457438 354813 6.19532e+07 6.21917e+06 23928 3.02733e+07 0 0.228324 0.985194 0.714903 6.1036e+07 0.00451144 1.31994e+07 1.29403e+07 1.32008e+07 135 1.32809e+07 8.32884e+06 0.00390171 1.33881e+07 50.2009 0.00572711 0.989818 0 50.0026 GTEX-13OW7-0926-SM-5L3EX 1 C1 2 pieces, moderate congestion, prominent pigmented histiocytes, rep aggregates delineated 6.9 Lung Lung 0008952 888 815 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.987254 302988 0.974064 0.990759 0.725998 22984 1 76 0.00299675 148 0 7.7782e+07 0.0255984 349374 7.85074e+07 5.58957e+06 23019 3.8616e+07 0 0.248066 0.990759 0.719289 7.7782e+07 0.00398851 1.71951e+07 9.24996e+06 1.72098e+07 168 1.72625e+07 1.10616e+07 0.00349088 1.74023e+07 50.2016 0.0044502 0.994264 0 50.0214 GTEX-13OW7-0926-SM-CYKRR 1 C1 2 pieces, moderate congestion, prominent pigmented histiocytes, rep aggregates delineated 6.9 Lung Lung 0008952 888 815 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 RIP-Seq GTEX-13OW7-1126-SM-5K7V6 0 C1 4 pieces (possible fragments of aliquots), no significant fibrous or vascular tissue, good specimens 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 891 813 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.987486 196693 0.975836 0.989597 0.800515 24075 1 76 0.00438146 213 0 9.82023e+07 0.0238115 300590 9.92347e+07 6.40438e+06 24107 4.87932e+07 0 0.175321 0.989597 0.792187 9.82023e+07 0.00493856 2.13093e+07 8.8875e+06 2.1477e+07 219 2.14891e+07 1.73856e+07 0.00465942 2.15044e+07 50.0178 0.00302908 0.991707 0 50.196 GTEX-13OW7-1626-SM-5IJDH 1 C1 2 pieces, ~20% adherent epicardial fat; rep delineated 7 Heart Heart - Atrial Appendage 0006631 911 796 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990064 189815 0.975994 0.992783 0.802106 22056 1 76 0.00215836 124 0 6.38297e+07 0.0236825 529148 6.42938e+07 8.46764e+06 22073 3.17504e+07 0 0.173888 0.992783 0.796318 6.38297e+07 0.00375397 1.38998e+07 6.21921e+06 1.38557e+07 142 1.38815e+07 1.16899e+07 0.00295398 1.40397e+07 50.2833 0.00823016 0.995502 0 49.9206 GTEX-13OW7-1926-SM-5LUB4 1 C1 6 pieces, all muscularis, good specimens 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 916 793 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988432 195395 0.972857 0.990595 0.803476 22694 1 76 0.00457467 150 0 7.03001e+07 0.026968 1.6772e+06 7.09675e+07 5.90859e+06 22719 3.4939e+07 0 0.169381 0.990595 0.795919 7.03001e+07 0.00391853 1.55808e+07 6.89753e+06 1.56388e+07 185 1.55981e+07 7.92411e+06 0.00424731 1.57695e+07 50.2733 0.0236333 0.992759 0 50.0928 GTEX-13OW7-2726-SM-5L3HN 2 C1 2 pieces, ~30% adherent fat, delineated. Cortex only, moderately autolyzed 6.3 Adrenal Gland Adrenal Gland 0002369 933 783 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991397 203192 0.968543 0.993623 0.777765 21423 1 76 0.00220672 127 0 5.85971e+07 0.0312259 2.43885e+06 5.89731e+07 4.60152e+06 21444 2.91716e+07 0 0.190777 0.993623 0.772806 5.85971e+07 0.00294992 1.28927e+07 1.02673e+07 1.2897e+07 149 1.29205e+07 7.03827e+06 0.00257749 1.29937e+07 50.1413 0.0413553 0.99585 0 50.0084 GTEX-13OW7-2926-SM-5MR3Z 1 C1 4 pieces, no abnormalities 6.2 Brain Brain - Cerebellum 0002037 942 775 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.99209 664991 0.930927 0.992541 0.697796 24069 1 76 0.00301365 198 0 8.86309e+07 0.068719 1.70324e+06 8.92969e+07 3.26423e+06 24099 4.41686e+07 0 0.233131 0.992541 0.692591 8.86309e+07 0.00294882 1.88265e+07 3.62267e+07 1.89611e+07 240 1.89523e+07 9.5538e+06 0.00298125 1.88819e+07 49.9069 0.0190739 0.992992 0 50.178 GTEX-13OW7-3026-SM-5L3GY 1 C1 4 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 945 772 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99109 453666 0.95616 0.993654 0.822923 22472 1 76 0.00216025 152 0 6.14995e+07 0.0435922 3.39386e+06 6.18923e+07 4.89193e+06 22483 3.06003e+07 0 0.133238 0.993654 0.8177 6.14995e+07 0.00312193 1.34189e+07 2.02473e+07 1.34156e+07 194 1.3354e+07 5.26549e+06 0.00263985 1.36327e+07 50.5165 0.0548349 0.996218 0 49.9937 GTEX-13OW7-3126-SM-5L3HB 1 C1 1 piece, %0% neurohypophysis (delineated), rest is dura 6.5 Pituitary Pituitary 0000007 945 773 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991416 395003 0.952927 0.993606 0.756789 24528 1 76 0.0022584 156 0 7.18621e+07 0.0468383 601546 7.23245e+07 5.65212e+06 24559 3.57767e+07 0 0.196138 0.993606 0.75195 7.18621e+07 0.00307488 1.55472e+07 1.66406e+07 1.56215e+07 179 1.56556e+07 9.18379e+06 0.00266574 1.56603e+07 50.0076 0.00831732 0.995797 0 50.1192 GTEX-13OW8-0002-SM-5CV8J B1 Blood Whole Blood 0013756 720 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13OW8-0002-SM-5HJQX_1 B1 Blood Whole Blood 0013756 720 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13OW8-0002-SM-6WSAW B1 Blood Whole Blood 0013756 720 BP-44681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13OW8-0005-SM-5NQAC B1 8.1 Blood Whole Blood 0013756 720 BP-44889 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.946809 245708 0.98517 0.949207 0.79963 18201 1 76 0.00259938 107 0 9.3216e+07 0.0123248 199612 9.82041e+07 1.5283e+07 18208 4.63133e+07 0 0.18554 0.949207 0.759014 9.3216e+07 0.0056194 2.22861e+07 1.80987e+08 2.23057e+07 145 2.22926e+07 2.60698e+07 0.00410558 2.25373e+07 50.2729 0.00203262 0.951604 0 50.0219 GTEX-13OW8-0011-R10a-SM-5L3H6 B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 745 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991521 356617 0.961998 0.993848 0.832865 23052 1 76 0.00205501 197 0 6.84148e+07 0.0376166 3.79014e+06 6.88383e+07 5.56227e+06 23068 3.40494e+07 0 0.129133 0.993848 0.827741 6.84148e+07 0.00279735 1.50656e+07 1.44203e+07 1.51003e+07 228 1.50942e+07 7.82759e+06 0.00242531 1.52198e+07 50.2073 0.0550587 0.996174 0 50.0576 GTEX-13OW8-0011-R11a-SM-5L3GT B1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 745 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989451 401297 0.944796 0.991898 0.738014 23113 1 76 0.00239056 153 0 7.06321e+07 0.0548422 2.08861e+06 7.12091e+07 6.066e+06 23141 3.51296e+07 0 0.206781 0.991898 0.732035 7.06321e+07 0.00316293 1.52873e+07 1.5887e+07 1.53163e+07 184 1.53545e+07 7.43235e+06 0.00277579 1.54055e+07 50.083 0.0293307 0.994345 0 50.0474 GTEX-13OW8-0011-R1a-SM-5L3HI B1, A1 6.5 Brain Brain - Hippocampus 0001954 745 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990526 663765 0.952912 0.99292 0.809682 22355 1 76 0.00194617 268 0 7.29932e+07 0.0468743 7.54065e+06 7.35137e+07 5.73576e+06 22369 3.634e+07 0 0.143229 0.99292 0.803949 7.29932e+07 0.00273368 1.58575e+07 3.55198e+07 1.5851e+07 280 1.57064e+07 5.95363e+06 0.00233897 1.61785e+07 50.7404 0.102575 0.995313 0 49.9898 GTEX-13OW8-0011-R2a-SM-5L3G2 B1, A1 6.7 Brain Brain - Substantia nigra 0002038 745 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991366 390625 0.965037 0.993722 0.837524 22077 1 76 0.0019168 268 0 7.54132e+07 0.0348008 6.91038e+06 7.58896e+07 6.25956e+06 22092 3.75483e+07 0 0.127513 0.993722 0.832266 7.54132e+07 0.00271121 1.65506e+07 2.51706e+07 1.66962e+07 301 1.64623e+07 5.79022e+06 0.00231306 1.69374e+07 50.7113 0.0910584 0.996078 0 50.219 GTEX-13OW8-0011-R3a-SM-5L3I4 B1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 745 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991348 357296 0.961188 0.993731 0.837838 22930 1 76 0.00200784 267 0 7.42915e+07 0.038559 6.30601e+06 7.47602e+07 5.81739e+06 22949 3.69802e+07 0 0.12335 0.993731 0.832585 7.42915e+07 0.00290347 1.63184e+07 1.8634e+07 1.64508e+07 294 1.63183e+07 6.99427e+06 0.00245458 1.6613e+07 50.4474 0.0843499 0.996114 0 50.202 GTEX-13OW8-0011-R4a-SM-9WG6V B1, A1 6.3 Brain Brain - Amygdala 0001876 745 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992504 357147 0.970587 0.994628 0.842076 23778 1 76 0.00222924 373 0 1.20832e+08 0.0292246 1.39481e+07 1.21485e+08 8.75037e+06 23802 6.01811e+07 0 0.128511 0.994628 0.837552 1.20832e+08 0.00301152 2.66019e+07 3.09844e+07 2.70414e+07 359 2.6724e+07 9.51673e+06 0.00261955 2.71154e+07 50.3635 0.114813 0.996753 0 50.4096 GTEX-13OW8-0011-R5b-SM-5L3FQ B1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 745 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990817 496767 0.95926 0.993461 0.819184 23358 1 76 0.00203792 267 0 7.783e+07 0.0405225 5.296e+06 7.83423e+07 6.16982e+06 23374 3.8714e+07 0 0.140077 0.993461 0.813827 7.783e+07 0.00299876 1.69187e+07 2.18822e+07 1.71078e+07 303 1.69485e+07 7.36265e+06 0.00251706 1.72791e+07 50.4829 0.0676009 0.996106 0 50.278 GTEX-13OW8-0011-R6b-SM-5L3I3 B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 745 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99043 615052 0.958052 0.993039 0.810069 23215 1 76 0.00196169 265 0 7.97601e+07 0.0417622 7.45199e+06 8.03192e+07 5.92215e+06 23234 3.96831e+07 0 0.147983 0.993039 0.80443 7.97601e+07 0.00286476 1.7309e+07 3.38747e+07 1.73585e+07 318 1.72183e+07 6.28669e+06 0.00241204 1.76517e+07 50.6214 0.0927797 0.995646 0 50.0713 GTEX-13OW8-0011-R7a-SM-5L3FP B1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 745 BP-47491 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991631 576192 0.960842 0.993945 0.821579 22607 1 76 0.0019238 371 0 8.85673e+07 0.0389929 7.62246e+06 8.91069e+07 7.15682e+06 22620 4.40991e+07 0 0.139262 0.993945 0.816604 8.85673e+07 0.00276433 1.91014e+07 3.53559e+07 1.94352e+07 345 1.91765e+07 6.96048e+06 0.00234309 1.9549e+07 50.4809 0.0855429 0.996258 0 50.4332 GTEX-13OW8-0011-R8a-SM-5L3G5 B1, A1 6.7 Brain Brain - Hypothalamus 0001898 745 BP-47594 RNA isolation_PAXgene Tissue miRNA 12/18/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989752 417644 0.964188 0.992199 0.832955 22175 1 76 0.00188244 266 0 7.45605e+07 0.0357014 6.94535e+06 7.51467e+07 5.77586e+06 22189 3.71203e+07 0 0.131233 0.992199 0.826457 7.45605e+07 0.00268938 1.62551e+07 2.9076e+07 1.64503e+07 311 1.62143e+07 4.5939e+06 0.00228492 1.66478e+07 50.6596 0.0924239 0.994646 0 50.2984 GTEX-13OW8-0126-SM-5IJE5 2 B1 2 pieces; nodular goiter with focal solid cell nest 6.7 Thyroid Thyroid 0002046 1030 760 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986646 239440 0.971097 0.988507 0.767611 25344 1 76 0.0046359 277 0 1.07289e+08 0.028585 424681 1.08536e+08 6.82952e+06 25382 5.33074e+07 0 0.203486 0.988507 0.758788 1.07289e+08 0.00500302 2.35832e+07 1.14659e+07 2.38073e+07 258 2.38617e+07 1.77567e+07 0.00481912 2.37252e+07 49.8566 0.00391281 0.990367 0 50.2365 GTEX-13OW8-0226-SM-5K7UP 1 B1 2 pieces; predominantly fat with 10-20% stroma with scattered ducts 5.8 Breast Breast - Mammary Tissue 0008367 1033 757 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983206 177419 0.976175 0.985936 0.804148 22820 1 76 0.0043169 142 0 6.64583e+07 0.0235196 664582 6.74063e+07 4.4896e+06 22846 3.2997e+07 0 0.172027 0.985936 0.792838 6.64583e+07 0.00505987 1.4685e+07 6.89292e+06 1.47135e+07 156 1.47379e+07 9.85765e+06 0.00468735 1.48345e+07 50.1635 0.00985934 0.988666 0 50.0484 GTEX-13OW8-0326-SM-5L3FB 1 B1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1039 751 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986419 268447 0.974754 0.99038 0.830921 22506 1 76 0.00314221 162 0 7.18985e+07 0.0249195 789662 7.25969e+07 7.59532e+06 22526 3.57087e+07 0 0.143833 0.99038 0.822928 7.18985e+07 0.00408509 1.58941e+07 1.08093e+07 1.58605e+07 184 1.59129e+07 1.14766e+07 0.00361176 1.6106e+07 50.3016 0.0108774 0.994341 0 49.9471 GTEX-13OW8-0426-SM-5J2NR 2 B1 2 pieces; each piece is ~50% stroma, 50% stroma and glands 6 Prostate Prostate 0002367 1044 746 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.980218 294291 0.965322 0.984309 0.762642 25838 1 76 0.00443487 202 0 9.52635e+07 0.0344438 1.25447e+06 9.67822e+07 5.45399e+06 25877 4.72096e+07 0 0.20268 0.984309 0.750675 9.52635e+07 0.00631911 2.09636e+07 1.16648e+07 2.10411e+07 215 2.11014e+07 1.26937e+07 0.00537307 2.12788e+07 50.2093 0.0129618 0.988399 0 50.0922 GTEX-13OW8-0526-SM-5KM24 2 B1 2 pieces; peritubular and interstitial fibrosis 6.9 Testis Testis 0000473 1050 740 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986623 676641 0.954869 0.988913 0.728493 35680 1 76 0.00389831 387 0 2.5028e+08 0.0448407 5.51102e+06 2.53086e+08 1.17196e+07 35813 1.24424e+08 0 0.226377 0.988913 0.720416 2.5028e+08 0.0048234 5.44942e+07 3.88025e+07 5.46159e+07 402 5.47852e+07 3.49201e+07 0.00435978 5.4848e+07 50.0287 0.0217753 0.991202 0 50.0558 GTEX-13OW8-1026-SM-5J1NQ 1 B1 6 pieces; well trimmed with minimal internal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1078 712 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986301 225176 0.97053 0.988146 0.737972 24405 1 76 0.00407347 155 0 7.49198e+07 0.0292707 307206 7.58185e+07 3.82707e+06 24442 3.72338e+07 0 0.232558 0.988146 0.729224 7.49198e+07 0.00497183 1.64825e+07 7.59787e+06 1.65195e+07 153 1.65535e+07 1.145e+07 0.00452181 1.65829e+07 50.0444 0.00405186 0.98999 0 50.056 GTEX-13OW8-1226-SM-5K7XD 1 B1 2 pieces; fat with some vessels/fibrous tissue (~10%) 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 1088 702 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989912 120531 0.976104 0.992436 0.827938 21888 1 76 0.00263933 145 0 6.11068e+07 0.0235436 441752 6.15725e+07 1.18879e+07 21908 3.04105e+07 0 0.148166 0.992436 0.821675 6.11068e+07 0.00385967 1.34733e+07 6.61287e+06 1.35066e+07 149 1.35306e+07 1.05774e+07 0.00324795 1.35981e+07 50.1244 0.0071745 0.99496 0 50.0618 GTEX-13OW8-1326-SM-5J1OW 1 B1 6 pieces; well trimmed with minimal internal fat, epidermis measures 38 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1093 697 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986051 250349 0.968598 0.988228 0.74279 24082 1 76 0.00406686 187 0 8.23067e+07 0.0312191 296827 8.32872e+07 4.70999e+06 24120 4.08854e+07 0 0.225807 0.988228 0.734047 8.23067e+07 0.00503459 1.79965e+07 8.29902e+06 1.80595e+07 173 1.80848e+07 1.26462e+07 0.00454966 1.81457e+07 50.084 0.0035639 0.990405 0 50.0873 GTEX-13OW8-1426-SM-5IJDT 1 B1 2 pieces; small amount of internal fat and vessels, some atrophy, focal chronic inflammation 8.4 Muscle Muscle - Skeletal 0011907 1096 694 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990676 187897 0.980749 0.99332 0.865596 20177 1 76 0.00190472 130 0 6.49818e+07 0.0189933 543790 6.54188e+07 8.85208e+06 20189 3.23389e+07 0 0.115153 0.99332 0.859814 6.49818e+07 0.00346418 1.38911e+07 7.13369e+06 1.38923e+07 149 1.38664e+07 1.35326e+07 0.00268237 1.40805e+07 50.3831 0.00831244 0.995965 0 50.0022 GTEX-13OW8-1526-SM-5K7V2 1 B1 2 pieces; attached and internal fat up to 25% 6.6 Nerve Nerve - Tibial 0001323 1099 691 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986193 205920 0.97362 0.988412 0.789032 24078 1 76 0.00435058 187 0 8.53338e+07 0.0260528 372260 8.63343e+07 5.79904e+06 24113 4.23944e+07 0 0.184588 0.988412 0.779888 8.53338e+07 0.00497352 1.8836e+07 7.31721e+06 1.89995e+07 185 1.90076e+07 1.43318e+07 0.00466135 1.90124e+07 50.0063 0.00431184 0.99063 0 50.216 GTEX-13OW8-1626-SM-5L3HW 1 B1 2 pieces; medial calcific sclerosis, mild atherosclerosis 6.9 Blood Vessel Artery - Tibial 0007610 1103 687 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991256 214272 0.976787 0.993613 0.83065 21946 1 76 0.00224504 164 0 7.41905e+07 0.0228374 327391 7.46674e+07 5.93582e+06 21965 3.69163e+07 0 0.146138 0.993613 0.825344 7.41905e+07 0.00310873 1.60121e+07 5.8855e+06 1.61675e+07 178 1.6172e+07 1.39932e+07 0.00267586 1.61707e+07 49.998 0.00438466 0.99597 0 50.2415 GTEX-13OW8-1726-SM-5L3GO 1 B1 2 pieces; diffuse interstitial fibrosis with granulomatous and chronic inflammation, abundant pigmented macrophages 7.6 Lung Lung 0008952 1108 682 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99168 136370 0.974606 0.993647 0.76722 23245 1 76 0.00262902 162 0 7.31589e+07 0.0246516 339625 7.36266e+07 6.21602e+06 23278 3.64112e+07 0 0.207387 0.993647 0.762345 7.31589e+07 0.00315771 1.63428e+07 7.96642e+06 1.63168e+07 179 1.63334e+07 1.16015e+07 0.00289284 1.64558e+07 50.1866 0.0046128 0.995613 0 49.9603 GTEX-13OW8-1826-SM-5L3H1 1 B1 6 pieces 7.7 Blood Vessel Artery - Aorta 0001496 1113 677 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991282 149875 0.975811 0.993282 0.783155 21901 1 76 0.00230336 141 0 7.17466e+07 0.0237156 227961 7.22319e+07 5.6629e+06 21926 3.57083e+07 0 0.192656 0.993282 0.777893 7.17466e+07 0.00285245 1.56474e+07 6.27211e+06 1.56278e+07 162 1.56587e+07 1.3345e+07 0.00257735 1.57517e+07 50.148 0.00315596 0.995281 0 49.9687 GTEX-13OW8-2026-SM-9WYSA 1 B1 2 pieces; partial peripheral rim of fat and nerve, up to 30%, atherosclerosis 5.9 Blood Vessel Artery - Coronary 0001621 1124 666 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991896 225407 0.977302 0.993118 0.796756 22771 1 76 0.0026132 199 0 8.69473e+07 0.0222908 585785 8.75498e+07 6.36366e+06 22796 4.32849e+07 0 0.180546 0.993118 0.791273 8.69473e+07 0.00445731 1.89358e+07 8.99568e+06 1.90588e+07 206 1.90516e+07 1.56523e+07 0.00353412 1.90523e+07 50.0009 0.00669087 0.99434 0 50.1619 GTEX-13OW8-2126-SM-5J1OS 1 B1 2 pieces 6.6 Heart Heart - Left Ventricle 0006566 1127 663 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.987123 189795 0.982741 0.989418 0.847084 19960 1 76 0.00365702 367 0 8.72169e+07 0.0171874 6.08826e+06 8.81497e+07 5.12646e+06 19972 4.33608e+07 0 0.135657 0.989418 0.83812 8.72169e+07 0.00457752 1.9369e+07 2.78913e+07 1.94814e+07 372 1.94313e+07 5.40798e+06 0.0041162 1.95791e+07 50.1894 0.0690672 0.991714 0 50.1446 GTEX-13OW8-2226-SM-5K7Z4 1 B1 6 pieces; well trimmed 6.4 Esophagus Esophagus - Muscularis 0004648 1135 655 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.988202 148954 0.97022 0.991234 0.793958 22799 1 76 0.00267616 140 0 6.52297e+07 0.0295609 1.07816e+06 6.58065e+07 1.16263e+07 22828 3.24189e+07 0 0.176262 0.991234 0.786998 6.52297e+07 0.00418673 1.4181e+07 5.90131e+06 1.41962e+07 163 1.41802e+07 9.22242e+06 0.00342913 1.43849e+07 50.3582 0.0163838 0.994266 0 50.0269 GTEX-13OW8-2326-SM-5L3I9 1 B1 6 pieces; congested vessels 6.6 Esophagus Esophagus - Mucosa 0006920 1142 648 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991224 233842 0.973475 0.993491 0.806442 22774 1 76 0.00223655 162 0 7.20711e+07 0.0262625 792896 7.25433e+07 5.95667e+06 22794 3.58796e+07 0 0.167032 0.993491 0.801193 7.20711e+07 0.0030023 1.60717e+07 9.29934e+06 1.6174e+07 181 1.61954e+07 1.16e+07 0.00261855 1.62069e+07 50.0176 0.01093 0.995758 0 50.1585 GTEX-13OW8-2426-SM-5L3ID 1 B1 6 pieces; muscularis, few pieces with attached fat, larger vessels, and nerve 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 1147 643 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 EXCLUDE 0.991907 143814 0.973045 0.994002 0.798577 22554 1 76 0.00216453 142 0 6.51027e+07 0.0267136 746235 6.54955e+07 5.21381e+06 22574 3.23999e+07 0 0.174468 0.994002 0.793787 6.51027e+07 0.00284004 1.4198e+07 6.23662e+06 1.42237e+07 156 1.42154e+07 1.05162e+07 0.00250157 1.43337e+07 50.2073 0.0113937 0.996098 0 50.0451 GTEX-13OW8-2426-SM-9WPNM 1 B1 6 pieces; muscularis, few pieces with attached fat, larger vessels, and nerve 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1147 643 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987963 180715 0.974117 0.989682 0.797041 23203 1 76 0.00641836 147 0 7.33983e+07 0.025637 934896 7.41636e+07 1.20147e+07 23222 3.65394e+07 0 0.177076 0.989682 0.788817 7.33983e+07 0.00695748 1.59877e+07 8.06204e+06 1.61428e+07 153 1.61442e+07 1.17533e+07 0.00668746 1.61078e+07 49.9436 0.0126059 0.9914 0 50.2414 GTEX-13OW8-2726-SM-5L3FZ 2 B1 6 pieces; muscularis, some fat and vessels 5.9 Colon Colon - Sigmoid 0001159 1160 630 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991036 274720 0.97101 0.993351 0.804675 22928 1 76 0.00220351 199 0 8.10256e+07 0.0287621 1.12250e+06 8.15679e+07 6.32665e+06 22951 4.0302e+07 0 0.166335 0.993351 0.799325 8.10256e+07 0.0030632 1.74621e+07 7.68862e+06 1.74888e+07 207 1.74994e+07 1.3027e+07 0.00263235 1.76272e+07 50.182 0.0137616 0.995667 0 50.0383 GTEX-13OW8-2826-SM-5L3GC 1 B1 2 pieces 5.9 Brain Brain - Cortex 0001870 1245 545 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99172 344488 0.959369 0.993952 0.808506 24064 1 76 0.00208817 270 0 8.01178e+07 0.0403048 3.56931e+06 8.06054e+07 6.74207e+06 24088 3.98851e+07 0 0.150864 0.993952 0.803616 8.01178e+07 0.00282774 1.7606e+07 1.71942e+07 1.76212e+07 269 1.76333e+07 9.74383e+06 0.00245712 1.7756e+07 50.1734 0.0442813 0.996184 0 50.0215 GTEX-13OW8-2926-SM-5L3FV 1 B1 2 pieces; Purkinje cells well visualized with no clear evidence of hypoxic damage 5.9 Brain Brain - Cerebellum 0002037 1241 549 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990152 519341 0.938958 0.992476 0.704017 24103 1 76 0.00241356 199 0 8.19925e+07 0.060744 1.95376e+06 8.26141e+07 6.33649e+06 24137 4.07784e+07 0 0.23494 0.992476 0.69872 8.19925e+07 0.00318356 1.76135e+07 2.35963e+07 1.76815e+07 223 1.77115e+07 8.17975e+06 0.00279766 1.77636e+07 50.0733 0.0236493 0.9948 0 50.0964 GTEX-13OW8-3026-SM-5L3G8 1 B1 1 pieces; adenohypophysis, neurohypophysis, and pars intermedia with some cystically dilated spaces 7.1 Pituitary Pituitary 0000007 1237 553 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.985114 309405 0.964057 0.987407 0.769833 24618 1 76 0.00242597 140 0 7.06648e+07 0.0356866 448345 7.1566e+07 5.221e+06 24646 3.51331e+07 0 0.194224 0.987407 0.760138 7.06648e+07 0.00331834 1.54848e+07 1.22042e+07 1.55558e+07 157 1.55836e+07 1.14559e+07 0.00287112 1.56175e+07 50.0543 0.00626478 0.989701 0 50.1144 GTEX-13PDP-0011-R1a-SM-5PNX5 C1, A1 7.1 Brain Brain - Hippocampus 0001954 789 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991645 924037 0.957205 0.992592 0.831862 22323 1 76 0.00288921 368 0 1.08436e+08 0.0426145 1.41498e+07 1.09245e+08 3.09792e+06 22339 5.4022e+07 0 0.125343 0.992592 0.8257 1.08436e+08 0.0034231 2.32958e+07 4.60796e+07 2.41768e+07 375 2.37949e+07 7.42847e+06 0.0031559 2.37798e+07 49.9841 0.129523 0.99354 0 50.9278 GTEX-13PDP-0011-R2b-SM-5O9DH C1, A1 5.9 Brain Brain - Substantia nigra 0002038 789 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.987073 277840 0.976211 0.989544 0.843345 21614 1 76 0.00283753 372 0 1.12129e+08 0.0236616 1.60911e+07 1.13314e+08 4.4399e+06 21625 5.57548e+07 0 0.132866 0.989544 0.834527 1.12129e+08 0.00377137 2.44219e+07 3.75662e+07 2.5299e+07 393 2.46325e+07 7.2432e+06 0.00330328 2.52866e+07 50.6552 0.142004 0.992015 0 50.882 GTEX-13PDP-0011-R6b-SM-5O9D5 C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 789 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.982034 1.26008e+06 0.948677 0.985634 0.811038 20964 1 76 0.00346339 366 0 9.72991e+07 0.0512305 1.58781e+07 9.87172e+07 4.73098e+06 20977 4.82533e+07 0 0.137638 0.985634 0.799387 9.72991e+07 0.00471474 2.06238e+07 6.19049e+07 2.13821e+07 400 2.09817e+07 3.91366e+06 0.00408678 2.12934e+07 50.3687 0.160844 0.989235 0 50.9026 GTEX-13PDP-0011-R8b-SM-5O9CS C1, A1 6.7 Brain Brain - Hypothalamus 0001898 789 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985113 1.48202e+06 0.939776 0.9882 0.810664 23910 1 76 0.00344264 369 0 1.12353e+08 0.0600375 1.31822e+07 1.13694e+08 4.71609e+06 23933 5.57901e+07 0 0.129111 0.9882 0.801098 1.12353e+08 0.00462194 2.39829e+07 5.91244e+07 2.44521e+07 384 2.43164e+07 7.19514e+06 0.00403045 2.44364e+07 50.123 0.115944 0.991287 0 50.4843 GTEX-13PDP-0126-SM-5L3HD 1 C1 6 pieces; predominantly well trimmed with minimal attached/internal fat, epidermis measures 31 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 842 1068 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.99126 154778 0.975743 0.993494 0.775616 22806 1 76 0.00226584 168 0 6.88062e+07 0.0240339 409862 6.92568e+07 5.23399e+06 22833 3.42375e+07 0 0.200127 0.993494 0.77057 6.88062e+07 0.00298259 1.51544e+07 7.09401e+06 1.5115e+07 159 1.51286e+07 1.16359e+07 0.00262341 1.52847e+07 50.2566 0.00591801 0.995728 0 49.9348 GTEX-13PDP-0226-SM-5K7W9 1 C1 2 pieces; fat with minimal fibrous/vascular tissue (<10%) 6 Adipose Tissue Adipose - Subcutaneous 0002190 844 1067 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985165 234536 0.972587 0.987452 0.753749 24929 1 76 0.00444146 213 0 1.05132e+08 0.0270924 675234 1.06468e+08 7.26950e+06 24970 5.21953e+07 0 0.218839 0.987452 0.74429 1.05132e+08 0.00521978 2.31396e+07 1.05303e+07 2.32523e+07 236 2.32908e+07 1.58368e+07 0.00482972 2.33389e+07 50.0516 0.00634211 0.989739 0 50.1214 GTEX-13PDP-0326-SM-5K7XP 1 C1 2 pieces; one includes ~5% internal fat/vessels, nuclear internalization and some atrophy 6.9 Muscle Muscle - Skeletal 0011907 848 1063 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.989523 152369 0.973886 0.992203 0.827706 20943 1 76 0.00248839 141 0 6.55831e+07 0.025907 1.64194e+06 6.60985e+07 1.29369e+07 20958 3.26416e+07 0 0.14618 0.992203 0.821253 6.55831e+07 0.00376397 1.43486e+07 7.20697e+06 1.44044e+07 156 1.44043e+07 1.15199e+07 0.00312446 1.45107e+07 50.1839 0.0248408 0.994883 0 50.0971 GTEX-13PDP-0726-SM-5L3HP 1 C1 6 pieces; well trimmed with scant internal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 854 1059 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991911 199578 0.978066 0.994018 0.809439 21493 1 76 0.00214512 196 0 7.58601e+07 0.0216783 630709 7.63166e+07 6.03283e+06 21515 3.77674e+07 0 0.168627 0.994018 0.804598 7.58601e+07 0.00284103 1.65787e+07 8.9356e+06 1.65099e+07 193 1.65242e+07 1.33768e+07 0.00249234 1.67141e+07 50.2857 0.00826437 0.996126 0 49.896 GTEX-13PDP-1026-SM-5L3FA 1 C1 2 pieces; thyroid with small portion of attached fat and skeletal muscle, few solid cell nests 6.3 Thyroid Thyroid 0002046 859 1056 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.985349 799965 0.959748 0.989509 0.760934 26534 1 76 0.00316016 381 0 1.62824e+08 0.0399713 2.40484e+06 1.64551e+08 1.68305e+07 26602 8.08298e+07 0 0.198814 0.989509 0.752951 1.62824e+08 0.00424255 3.53699e+07 3.1904e+07 3.5521e+07 418 3.56575e+07 2.6779e+07 0.00369908 3.58904e+07 50.1628 0.0146146 0.993668 0 50.1066 GTEX-13PDP-1026-SM-DK2JQ 1 C1 2 pieces; thyroid with small portion of attached fat and skeletal muscle, few solid cell nests Thyroid Thyroid 0002046 859 1056 BP-52563 DNA Extraction from Paxgene-derived Lysate Plate Based 05/08/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-13PDP-1026-SM-DLIOB 1 C1 2 pieces; thyroid with small portion of attached fat and skeletal muscle, few solid cell nests Thyroid Thyroid 0002046 859 1056 BP-52563 DNA Extraction from Paxgene-derived Lysate Plate Based 05/08/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-13PDP-1226-SM-5K7TW 1 C1 2 pieces 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 863 1053 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.982625 303111 0.969566 0.985171 0.803629 23761 1 76 0.00443674 207 0 9.52554e+07 0.0301533 751949 9.66892e+07 7.02106e+06 23781 4.72583e+07 0 0.165937 0.985171 0.791713 9.52554e+07 0.00529334 2.09751e+07 1.68891e+07 2.1127e+07 219 2.11477e+07 1.63611e+07 0.00486393 2.12008e+07 50.0626 0.00777697 0.987717 0 50.1804 GTEX-13PDP-1326-SM-5K7U9 1 C1 2 pieces; hypertrophy and interstitial fibrosis, small amount of internal fat 5.8 Heart Heart - Atrial Appendage 0006631 864 1053 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.981802 371760 0.968046 0.984721 0.842286 21102 1 76 0.00441361 254 0 8.32084e+07 0.0312015 1.04502e+07 8.44994e+07 5.77993e+06 21112 4.12774e+07 0 0.12576 0.984721 0.829417 8.32084e+07 0.00530983 1.80869e+07 1.64398e+07 1.81727e+07 257 1.8123e+07 8.22281e+06 0.00486039 1.83729e+07 50.3424 0.123672 0.98764 0 50.1184 GTEX-13PDP-2926-SM-5N9E8 1 C1 4 pieces 5.7 Brain Brain - Cerebellum 0002037 898 1028 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 EXCLUDE 0.986408 571820 0.944826 0.987895 0.733994 24139 1 76 0.00414643 371 0 1.21771e+08 0.0549002 4.1838e+06 1.23263e+08 6.20688e+06 24176 6.046e+07 0 0.210832 0.987895 0.725109 1.21771e+08 0.00429081 2.6261e+07 2.40683e+07 2.65405e+07 354 2.64355e+07 9.9261e+06 0.00421851 2.65333e+07 50.0923 0.0339419 0.989383 0 50.2647 GTEX-13PL6-0002-SM-5GYAR C1 Blood Whole Blood 0013756 561 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13PL6-0002-SM-5HJPV C1 Blood Whole Blood 0013756 561 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13PL6-0002-SM-6WSCU C1 Blood Whole Blood 0013756 561 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13PL6-0011-R5b-SM-5O9BI C1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 565 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98691 1.04006e+06 0.957278 0.989292 0.79605 24760 1 76 0.004192 370 0 1.33783e+08 0.0425478 1.32578e+07 1.35231e+08 5.19906e+06 24791 6.65244e+07 0 0.161227 0.989292 0.787527 1.33783e+08 0.00518753 2.85274e+07 7.12879e+07 2.89298e+07 362 2.86426e+07 9.27534e+06 0.00468857 2.90728e+07 50.3727 0.0980381 0.991675 0 50.3502 GTEX-13PL6-0011-R6a-SM-5O9C5 C1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 565 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983386 1.12889e+06 0.957002 0.986106 0.815251 21380 1 76 0.00445768 367 0 1.12612e+08 0.0428938 1.60185e+07 1.14199e+08 4.75678e+06 21389 5.59777e+07 0 0.141751 0.986106 0.803923 1.12612e+08 0.00548942 2.33666e+07 7.85604e+07 2.46497e+07 368 2.40309e+07 4.99869e+06 0.00497213 2.41848e+07 50.1596 0.140268 0.988826 0 51.3361 GTEX-13PL6-0011-R9b-SM-5O9CH C1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 565 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98157 1.00181e+06 0.953016 0.984742 0.833303 22426 1 76 0.00424666 379 0 1.08528e+08 0.0467593 1.24956e+07 1.1021e+08 5.32117e+06 22440 5.38362e+07 0 0.119713 0.984742 0.820589 1.08528e+08 0.00543587 2.32847e+07 3.91103e+07 2.45268e+07 399 2.40702e+07 8.79401e+06 0.00483935 2.40276e+07 49.9557 0.11338 0.987914 0 51.299 GTEX-13PL6-0326-SM-5IJCP 0 C1 2 pieces, ~10% interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 653 578 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991838 168511 0.982152 0.994069 0.868798 19340 1 76 0.00225194 127 0 6.96064e+07 0.01761 1.22357e+06 7.00217e+07 8.84297e+06 19347 3.46625e+07 0 0.113353 0.994069 0.863645 6.96064e+07 0.0037862 1.52879e+07 7.48304e+06 1.51873e+07 154 1.5202e+07 1.49027e+07 0.00301735 1.54153e+07 50.3484 0.0174741 0.9963 0 49.835 GTEX-13PL6-0526-SM-5L3G6 0 C1 2 pieces, no atherosis; good clean specimens, no adherent fat 6.2 Blood Vessel Artery - Tibial 0007610 662 570 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.9906 263189 0.972586 0.992955 0.776334 22379 1 76 0.00240332 141 0 6.98169e+07 0.0270955 364737 7.03123e+07 5.33436e+06 22410 3.47274e+07 0 0.196252 0.992955 0.770864 6.98169e+07 0.00324333 1.54382e+07 7.85403e+06 1.54949e+07 154 1.55365e+07 1.22836e+07 0.00282233 1.55542e+07 50.0285 0.00518739 0.99531 0 50.0917 GTEX-13PL6-0826-SM-5IJBI 1 C1 2 pieces, no abnormalities 5.9 Heart Heart - Atrial Appendage 0006631 681 553 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989171 319380 0.970191 0.992264 0.777475 22725 1 76 0.0025937 197 0 8.31565e+07 0.0296247 4.85026e+06 8.38048e+07 1.04297e+07 22745 4.13307e+07 0 0.192716 0.992264 0.77146 8.31565e+07 0.00450473 1.8187e+07 1.5723e+07 1.79493e+07 217 1.7883e+07 1.00146e+07 0.00354624 1.85046e+07 50.8541 0.0578757 0.995357 0 49.6712 GTEX-13PL6-0926-SM-5KLYY 0 C1 2 pieces, 10% interstitial fibrous tissue 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 682 552 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.973132 245437 0.968333 0.975647 0.776726 24186 1 76 0.00412595 162 0 8.15095e+07 0.0313381 872910 8.35441e+07 4.02361e+06 24213 4.04478e+07 0 0.191607 0.975647 0.75781 8.15095e+07 0.00550983 1.78537e+07 1.18195e+07 1.79797e+07 180 1.79979e+07 1.25491e+07 0.0048161 1.80427e+07 50.0622 0.0104485 0.978161 0 50.1758 GTEX-13PL6-1026-SM-5L3E5 1 C1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 708 527 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986047 349118 0.956139 0.990318 0.749164 23416 1 76 0.00328931 130 0 6.2337e+07 0.0435516 190933 6.29465e+07 6.55506e+06 23443 3.09465e+07 0 0.206976 0.990318 0.74191 6.2337e+07 0.0045556 1.34834e+07 1.30501e+07 1.35107e+07 131 1.35809e+07 1.04229e+07 0.00391973 1.36681e+07 50.16 0.00303326 0.994589 0 50.0506 GTEX-13PL6-1126-SM-5L3IE 0 C1 2 pieces, no dermal fat; squamous epithelium is ~45 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 711 524 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.992533 287147 0.974544 0.994402 0.801563 22671 1 76 0.00229718 286 0 8.63972e+07 0.0251926 770320 8.68836e+07 6.50796e+06 22695 4.30251e+07 0 0.172981 0.994402 0.797076 8.63972e+07 0.00287055 1.89873e+07 1.35437e+07 1.89354e+07 259 1.89294e+07 1.47922e+07 0.00258333 1.91438e+07 50.2816 0.00886612 0.996271 0 49.9316 GTEX-13PL6-2926-SM-5L3I2 1 C1 2 pieces, post-menopausal, involuted TLDUs present, rep delineated 5.8 Breast Breast - Mammary Tissue 0008367 741 504 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991215 216756 0.967356 0.993293 0.734407 25031 1 76 0.00246524 147 0 7.70338e+07 0.0322491 427368 7.7554e+07 6.53061e+06 25073 3.83286e+07 0 0.232949 0.993293 0.729482 7.70338e+07 0.00305963 1.69245e+07 1.11215e+07 1.68988e+07 165 1.6907e+07 1.27896e+07 0.00276181 1.70662e+07 50.2343 0.00551059 0.995372 0 49.962 GTEX-13PL6-3126-SM-5LUAR 1 C1 4 pieces, no abnormalities 5.7 Brain Brain - Cortex 0001870 772 474 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990569 397652 0.963707 0.992878 0.831655 22964 1 76 0.00489367 143 0 6.31484e+07 0.0360231 3.90516e+06 6.36014e+07 5.34095e+06 22974 3.13811e+07 0 0.132052 0.992878 0.825732 6.31484e+07 0.00422032 1.37462e+07 1.49289e+07 1.38822e+07 172 1.37361e+07 6.14954e+06 0.00455778 1.40346e+07 50.5374 0.0614006 0.995188 0 50.2461 GTEX-13PL7-0003-SM-5GYAN B1 Blood Whole Blood 0013756 -115 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13PL7-0003-SM-5HJRW B1 Blood Whole Blood 0013756 -115 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13PL7-0003-SM-6WSD3 B1 Blood Whole Blood 0013756 -115 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13PL7-0005-SM-5N9ET B1 8.8 Blood Whole Blood 0013756 -115 BP-44889 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.983173 764278 0.959744 0.984799 0.796693 19715 1 76 0.00467331 154 0 9.59337e+07 0.0392599 380609 9.74145e+07 4.6521e+06 19729 4.76673e+07 0 0.163051 0.984799 0.784583 9.59337e+07 0.00478151 2.12752e+07 8.3076e+07 2.15127e+07 173 2.15409e+07 2.12023e+07 0.00472732 2.14093e+07 49.8468 0.00390711 0.986425 0 50.2775 GTEX-13PL7-0226-SM-731DT 1 B1 6 pieces, squamous mucosa well-preserved, ~0.4mm, 30-40% thicknes 9.2 Esophagus Esophagus - Mucosa 0006920 148 911 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6196,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.991365 329483 0.969818 0.992856 0.796195 22937 1 76 0.00293844 202 0 9.20076e+07 0.0298599 385374 9.26697e+07 1.04044e+07 22964 4.57955e+07 0 0.173623 0.992856 0.790507 9.20076e+07 0.00367933 2.04719e+07 1.23079e+07 2.04834e+07 207 2.05143e+07 1.74276e+07 0.00330833 2.05743e+07 50.073 0.00415858 0.994347 0 50.014 GTEX-13PL7-0326-SM-5IJEK 1 B1 6 pieces, all muscularis, good specimens 8.3 Esophagus Esophagus - Muscularis 0004648 149 910 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987895 234438 0.974449 0.989863 0.829779 23789 1 76 0.00449467 281 0 1.01081e+08 0.0252843 725846 1.02117e+08 6.54344e+06 23812 5.02577e+07 0 0.14467 0.989863 0.821367 1.01081e+08 0.0048299 2.16519e+07 9.68405e+06 2.198e+07 273 2.19135e+07 1.74417e+07 0.00466195 2.1907e+07 49.9926 0.00710802 0.991832 0 50.3761 GTEX-13PL7-0526-SM-5J2MQ 1 B1 6 pieces, all muscularis 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 152 907 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984393 194682 0.974002 0.988619 0.822513 22891 1 76 0.00425981 279 0 9.76582e+07 0.0257792 989019 9.87824e+07 5.6061e+06 22922 4.84863e+07 0 0.151489 0.988619 0.813153 9.76582e+07 0.00598008 2.09824e+07 1.03227e+07 2.12207e+07 271 2.11836e+07 1.52671e+07 0.00511627 2.13896e+07 50.2419 0.0100121 0.992846 0 50.2824 GTEX-13PL7-0626-SM-5IJCD 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.5 Muscle Muscle - Skeletal 0011907 154 905 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991766 176285 0.98281 0.994017 0.87003 19783 1 76 0.00195615 209 0 7.29424e+07 0.0169915 958647 7.33814e+07 9.37364e+06 19791 3.63182e+07 0 0.11278 0.994017 0.864825 7.29424e+07 0.00344418 1.60969e+07 9.60128e+06 1.59367e+07 217 1.58636e+07 1.27252e+07 0.00269848 1.63188e+07 50.7073 0.0130639 0.996268 0 49.7499 GTEX-13PL7-0726-SM-5KM1S 1 B1 2 pieces noabnormalities 8.9 Heart Heart - Atrial Appendage 0006631 156 903 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.985599 209662 0.982069 0.988048 0.824271 21308 1 76 0.00345442 268 0 9.02242e+07 0.0177037 1.69062e+06 9.13156e+07 4.05262e+06 21324 4.48941e+07 0 0.157798 0.988048 0.814419 9.02242e+07 0.00444119 1.89335e+07 3.15331e+07 1.90245e+07 270 1.88921e+07 1.31969e+07 0.00394658 1.92504e+07 50.4697 0.018514 0.990496 0 50.1199 GTEX-13PL7-1026-SM-5MR5C 1 B1 2 pieces, all cortex, ~20% adherent fat, delineated 7.9 Adrenal Gland Adrenal Gland 0002369 158 901 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.994297 193392 0.976039 0.994698 0.830908 22363 1 76 0.0026221 199 0 7.98969e+07 0.0236355 1.54386e+06 8.03227e+07 2.98142e+06 22392 3.98329e+07 0 0.145131 0.994698 0.826503 7.98969e+07 0.00257096 1.75156e+07 1.22557e+07 1.75707e+07 252 1.75022e+07 1.22903e+07 0.00259654 1.76181e+07 50.1651 0.0192207 0.9951 0 50.0785 GTEX-13PL7-1126-SM-5MR5O 1 B1 2 pieces, minimal congestion 7.3 Spleen Spleen 0002106 159 900 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.992337 226184 0.963175 0.992753 0.783644 24454 1 76 0.00336486 205 0 8.73999e+07 0.0350254 778073 8.80379e+07 3.35954e+06 24483 4.34995e+07 0 0.179531 0.992753 0.777964 8.73999e+07 0.00330225 1.92755e+07 1.42274e+07 1.9369e+07 243 1.93241e+07 1.38178e+07 0.00333357 1.93598e+07 50.0462 0.00883793 0.993169 0 50.121 GTEX-13PL7-1226-SM-5SIAR 0 B1 2 pieces, no significant fibrosis 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 898 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990183 200249 0.977213 0.993388 0.851888 22250 1 76 0.00178611 211 0 7.91849e+07 0.0224621 555818 7.97119e+07 7.7105e+06 22266 3.93897e+07 0 0.125325 0.993388 0.846256 7.91849e+07 0.00291038 1.73855e+07 8.07816e+06 1.74996e+07 239 1.75139e+07 1.45866e+07 0.00234643 1.76121e+07 50.1397 0.00697283 0.996594 0 50.1635 GTEX-13PL7-1726-SM-5J2NX 1 B1 2 pieces, pronounced chronic congestion--prominent areas delineated, with necrotizing foci (ensquared) 8.2 Lung Lung 0008952 167 892 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.985077 165083 0.971426 0.989046 0.809329 24401 1 76 0.00434983 142 0 7.79517e+07 0.0281817 282790 7.8815e+07 4.14026e+06 24433 3.87047e+07 0 0.162097 0.989046 0.800464 7.79517e+07 0.0060055 1.71475e+07 6.9701e+06 1.7313e+07 164 1.73628e+07 1.36168e+07 0.00517435 1.73859e+07 50.0333 0.00358802 0.993015 0 50.2401 GTEX-13PL7-1826-SM-5IJDV 1 B1 2 pieces, adherent fat up to ~2mm, nubbin delineated, minimal atherosis 8.1 Blood Vessel Artery - Coronary 0001621 169 890 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.990226 214090 0.972961 0.992712 0.827817 23050 1 76 0.00206077 163 0 7.53012e+07 0.0267339 371640 7.58541e+07 9.42068e+06 23074 3.7452e+07 0 0.145143 0.992712 0.821784 7.53012e+07 0.0038614 1.6293e+07 6.40146e+06 1.63796e+07 178 1.63195e+07 1.41775e+07 0.00295883 1.6535e+07 50.328 0.00489941 0.995198 0 50.1324 GTEX-13PL7-1926-SM-5J1MM 0 B1 3 pieces, clean specimens, no adherent fat 7.5 Nerve Nerve - Tibial 0001323 171 888 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.98901 376041 0.969825 0.99092 0.777616 24774 1 76 0.00394224 284 0 1.01661e+08 0.0298832 460051 1.02592e+08 5.304e+06 24816 5.05496e+07 0 0.192209 0.99092 0.770555 1.01661e+08 0.00461365 2.23594e+07 8.21671e+06 2.25349e+07 267 2.25289e+07 1.67378e+07 0.0042773 2.25518e+07 50.0253 0.00448427 0.99283 0 50.1955 GTEX-13PL7-2026-SM-5IFGK 1 B1 2 pieces, all myometrium 7.8 Uterus Uterus 0000995 172 887 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988216 219186 0.961509 0.991477 0.742697 24012 1 76 0.00226009 167 0 7.70014e+07 0.0382425 360583 7.76633e+07 8.67753e+06 24053 3.8281e+07 0 0.218812 0.991477 0.736367 7.70014e+07 0.00374929 1.66144e+07 7.90728e+06 1.67597e+07 171 1.67717e+07 1.17611e+07 0.00300224 1.684e+07 50.1016 0.0046429 0.994738 0 50.2177 GTEX-13PL7-2126-SM-5L3HZ 0 B1 2 pieces, adherent rim of fibrous tissue up to ~2mm, delineated (rep) 8.4 Blood Vessel Artery - Tibial 0007610 174 885 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.992453 163138 0.973565 0.994602 0.831668 20914 1 76 0.00204799 131 0 5.4514e+07 0.0260659 269526 5.48099e+07 4.26926e+06 20927 2.7134e+07 0 0.141897 0.994602 0.827179 5.4514e+07 0.00274426 1.17683e+07 3.99764e+06 1.17406e+07 131 1.17325e+07 1.03178e+07 0.00239537 1.18862e+07 50.3255 0.00491747 0.99675 0 49.9412 GTEX-13PL7-2226-SM-5L3IC 1 B1 2 pieces, fairly well preserved, abundant Islets noted, rep delineated 8.1 Pancreas Pancreas 0001150 175 884 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.992271 167093 0.973312 0.994292 0.829941 22755 1 76 0.00215943 116 0 6.86623e+07 0.0263589 232390 6.90565e+07 5.52022e+06 22773 3.41985e+07 0 0.143371 0.994292 0.825203 6.86623e+07 0.00275538 1.5552e+07 1.43753e+07 1.55427e+07 130 1.55683e+07 1.74425e+07 0.0024568 1.5659e+07 50.1453 0.00336522 0.996312 0 49.985 GTEX-13PL7-2326-SM-5L3FY 1 B1 2 pieces, typical post-menopausal atrophy 6.7 Ovary Ovary 0000992 176 883 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991923 266481 0.964793 0.994045 0.744282 24335 1 76 0.00209939 212 0 9.09718e+07 0.0349562 587740 9.15168e+07 7.23504e+06 24382 4.52931e+07 0 0.220511 0.994045 0.739849 9.09718e+07 0.00276629 1.99526e+07 1.06308e+07 2.00071e+07 233 2.00419e+07 1.51303e+07 0.00243213 2.01003e+07 50.0728 0.00642221 0.996167 0 50.0681 GTEX-13PL7-2426-SM-5J2N3 1 B1 6 pieces, all muscularis 5.8 Colon Colon - Sigmoid 0001159 179 880 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981962 226158 0.970041 0.986604 0.793359 23303 1 76 0.00435049 212 0 9.25465e+07 0.0297792 688093 9.38031e+07 5.43668e+06 23335 4.58989e+07 0 0.176682 0.986604 0.782731 9.25465e+07 0.00621555 1.98659e+07 9.69288e+06 2.00982e+07 218 2.01371e+07 1.30625e+07 0.00527863 2.02209e+07 50.1038 0.0073355 0.991246 0 50.2906 GTEX-13PL7-2526-SM-5IFGR 1 B1 6 pieces, colon mucosa, well preserved, up to ~0.4mm, 70-80% thickness 7.9 Colon Colon - Transverse 0001157 184 875 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986618 206148 0.970255 0.99003 0.794907 23407 1 76 0.00271916 211 0 7.37231e+07 0.0275755 1.13427e+06 7.44655e+07 9.07779e+06 23438 3.65776e+07 0 0.175347 0.99003 0.786983 7.37231e+07 0.00423436 1.62874e+07 1.53485e+07 1.63036e+07 203 1.63161e+07 1.0106e+07 0.00347415 1.65057e+07 50.2889 0.0152321 0.993443 0 50.0249 GTEX-13PL7-2626-SM-5IFH4 1 B1 6 pieces, well preserved, lymphoid aggregates ~10-15% total 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 185 874 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.988043 253987 0.970788 0.990922 0.782279 23944 1 76 0.00247112 214 0 8.20036e+07 0.0286401 696749 8.27549e+07 9.49097e+06 23971 4.0775e+07 0 0.188508 0.990922 0.775178 8.20036e+07 0.00382368 1.81381e+07 1.35909e+07 1.82238e+07 223 1.82129e+07 1.22738e+07 0.00314543 1.83702e+07 50.215 0.00841943 0.993802 0 50.1178 GTEX-13PL7-2726-SM-5L3GB 1 B1 6 pieces, vaginal mucosa, squamous mucosa is ~0.3-0.4mm, well-preserved 7.2 Vagina Vagina 0000996 189 870 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991134 224020 0.970012 0.993481 0.746468 23641 1 76 0.00220227 171 0 7.88948e+07 0.029774 415346 7.94125e+07 6.22529e+06 23676 3.92659e+07 0 0.223544 0.993481 0.741602 7.88948e+07 0.00300528 1.74532e+07 9.19859e+06 1.74973e+07 178 1.75213e+07 1.26617e+07 0.00260283 1.76033e+07 50.1167 0.00523024 0.995829 0 50.0632 GTEX-13PL7-5010-SM-AN3ZR B1 Muscle Muscle - Skeletal 0011907 154 ChIP-Seq GTEX-13PL7-5016-SM-AN3ZS B1 Heart Heart - Left Ventricle 0006566 165 ChIP-Seq GTEX-13PLJ-0003-SM-5CV8G B1 Blood Whole Blood 0013756 886 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13PLJ-0003-SM-5HJPK B1 Blood Whole Blood 0013756 886 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13PLJ-0003-SM-6WSCN B1 Blood Whole Blood 0013756 886 BP-44777 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/21/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13PLJ-0005-SM-5NQ99 B1 8.6 Blood Whole Blood 0013756 886 BP-44889 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.974747 350076 0.97511 0.976714 0.791523 17852 1 76 0.00236478 94 0 5.71807e+07 0.0241208 108758 5.85439e+07 5.08828e+06 17856 2.84432e+07 0 0.183587 0.976714 0.773092 5.71807e+07 0.00374199 1.33218e+07 7.8816e+07 1.34157e+07 113 1.34216e+07 1.45232e+07 0.003052 1.34452e+07 50.0439 0.00185772 0.978682 0 50.1756 GTEX-13PLJ-0011-R11b-SM-5O9BS B1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 1128 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983137 1.22105e+06 0.940488 0.985929 0.750599 24551 1 76 0.00362844 369 0 1.2577e+08 0.0592611 6.04641e+06 1.27565e+08 5.66677e+06 24589 6.24191e+07 0 0.189889 0.985929 0.740038 1.2577e+08 0.00471043 2.6533e+07 4.93028e+07 2.72942e+07 382 2.72511e+07 9.61006e+06 0.0041679 2.68894e+07 49.666 0.0473986 0.988721 0 50.7071 GTEX-13PLJ-0011-R3a-SM-5O9DT B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1128 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984129 1.8467e+06 0.939586 0.987114 0.798006 22263 1 76 0.00335418 369 0 1.16162e+08 0.0602327 1.38498e+07 1.17679e+08 4.73313e+06 22274 5.77371e+07 0 0.141579 0.987114 0.787723 1.16162e+08 0.00443719 2.39712e+07 8.60918e+07 2.4977e+07 368 2.44602e+07 6.30732e+06 0.00389405 2.47423e+07 50.2866 0.117692 0.990099 0 51.0274 GTEX-13PLJ-0011-R5a-SM-5O9BG B1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 1128 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985497 1.53296e+06 0.94785 0.987857 0.786044 25209 1 76 0.0033877 372 0 1.3326e+08 0.0519304 1.01906e+07 1.34898e+08 5.62919e+06 25236 6.62579e+07 0 0.161806 0.987857 0.776499 1.3326e+08 0.00436318 2.81014e+07 7.84908e+07 2.87437e+07 371 2.85427e+07 9.99583e+06 0.00387427 2.85554e+07 50.0111 0.0755424 0.990217 0 50.565 GTEX-13PLJ-0011-R9b-SM-5O9DV B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 1128 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985451 582580 0.955627 0.988224 0.817882 23186 1 76 0.00353034 392 0 1.05648e+08 0.0439938 2.80385e+06 1.06907e+08 4.56834e+06 23209 5.24415e+07 0 0.137745 0.988224 0.808251 1.05648e+08 0.00471657 2.33566e+07 1.40253e+07 2.37945e+07 358 2.35771e+07 1.49075e+07 0.00412179 2.38462e+07 50.2837 0.0262271 0.990998 0 50.4644 GTEX-13PLJ-0126-SM-5L3HU 1 B1 3 pieces; large blood vessels and fibrous stroma comprise 30% of overall area 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 982 529 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990609 216490 0.972414 0.992996 0.776023 22912 1 76 0.00236807 135 0 6.60524e+07 0.0272927 210988 6.65183e+07 5.55245e+06 22936 3.28639e+07 0 0.196391 0.992996 0.770587 6.60524e+07 0.00324904 1.46457e+07 6.63408e+06 1.46943e+07 148 1.47428e+07 1.13028e+07 0.0028075 1.4745e+07 50.0037 0.00317188 0.995382 0 50.0828 GTEX-13PLJ-0326-SM-5L3I7 1 B1 2 pieces; moderate atrophy, 30 & 10% internal fat 7.3 Muscle Muscle - Skeletal 0011907 986 525 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991551 209086 0.974255 0.993924 0.813912 20842 1 76 0.0019812 131 0 6.50547e+07 0.0255839 742340 6.54524e+07 5.33614e+06 20864 3.23854e+07 0 0.160343 0.993924 0.808967 6.50547e+07 0.00286062 1.42381e+07 8.02576e+06 1.43087e+07 152 1.42983e+07 1.15051e+07 0.00241986 1.43941e+07 50.167 0.0113417 0.996297 0 50.1237 GTEX-13PLJ-0526-SM-5K7VW 1 B1 2 pieces; no plaques; well trimmed 7 Blood Vessel Artery - Tibial 0007610 1001 510 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985408 233189 0.972068 0.988033 0.82764 22489 1 76 0.00429075 214 0 1.0476e+08 0.0275771 631327 1.06029e+08 7.16555e+06 22512 5.20038e+07 0 0.144427 0.988033 0.817736 1.0476e+08 0.00518393 2.21911e+07 9.60078e+06 2.24322e+07 235 2.2382e+07 2.03705e+07 0.00473615 2.25123e+07 50.1451 0.00595428 0.990658 0 50.2702 GTEX-13PLJ-1726-SM-5L3FT 1 B1 1 piece; anterior and posterior lobes about equal [posterior outlined] 5.8 Pituitary Pituitary 0000007 1130 381 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990285 364444 0.951174 0.992813 0.737263 24509 1 76 0.0022879 141 0 7.1001e+07 0.0486291 770559 7.1515e+07 5.37855e+06 24548 3.53141e+07 0 0.213912 0.992813 0.731964 7.1001e+07 0.00332046 1.54124e+07 1.41167e+07 1.54872e+07 163 1.55e+07 9.18807e+06 0.00280287 1.55753e+07 50.1211 0.0107748 0.99534 0 50.121 GTEX-13PVQ-0003-SM-5GYCU C1 Blood Whole Blood 0013756 726 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13PVQ-0003-SM-7DRPY C1 Blood Whole Blood 0013756 726 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13PVQ-0011-R11a-SM-5O9DU C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 730 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984863 549746 0.944628 0.987487 0.725655 25859 1 76 0.00390347 372 0 1.18856e+08 0.055109 5.7598e+06 1.20362e+08 4.87128e+06 25915 5.90086e+07 0 0.218973 0.987487 0.716575 1.18856e+08 0.0049217 2.55926e+07 2.65778e+07 2.58344e+07 344 2.58385e+07 9.86762e+06 0.00441123 2.58603e+07 50.0211 0.0478538 0.990112 0 50.2351 GTEX-13PVQ-0011-R3b-SM-5O9D6 C1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 730 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985189 1.4917e+06 0.942825 0.988077 0.807252 24364 1 76 0.00364864 371 0 1.15218e+08 0.0568849 1.39416e+07 1.16608e+08 4.79414e+06 24386 5.72438e+07 0 0.135573 0.988077 0.797627 1.15218e+08 0.00470431 2.43223e+07 6.20178e+07 2.52492e+07 364 2.50044e+07 9.18367e+06 0.00417493 2.48271e+07 49.822 0.11956 0.990966 0 50.9349 GTEX-13PVQ-0011-R4a-SM-5O9CT C1, A1 6.3 Brain Brain - Amygdala 0001876 730 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98125 1.14665e+06 0.9502 0.984291 0.823293 23785 1 76 0.00376149 369 0 1.03744e+08 0.0495915 1.38714e+07 1.054e+08 4.9935e+06 23804 5.14349e+07 0 0.126907 0.984291 0.81036 1.03744e+08 0.00496859 2.22917e+07 4.52236e+07 2.30517e+07 409 2.28056e+07 7.16252e+06 0.00436318 2.28049e+07 49.9992 0.131607 0.987331 0 50.8381 GTEX-13PVQ-0011-R5b-SM-5O9DI C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 730 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986799 1.1789e+06 0.953609 0.98927 0.80194 25093 1 76 0.003572 371 0 1.27149e+08 0.0461704 1.56575e+07 1.28528e+08 5.15887e+06 25117 6.31973e+07 0 0.151669 0.98927 0.793335 1.27149e+08 0.00454247 2.72312e+07 6.15315e+07 2.77852e+07 357 2.76042e+07 1.0247e+07 0.00405603 2.76706e+07 50.0601 0.121822 0.99174 0 50.5035 GTEX-13PVQ-0011-R7a-SM-5L3G3 C1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 730 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991057 519327 0.954642 0.993261 0.808548 23763 1 76 0.00228888 267 0 8.19048e+07 0.0451512 9.06948e+06 8.24605e+07 6.61342e+06 23782 4.07856e+07 0 0.146095 0.993261 0.803099 8.19048e+07 0.00295053 1.77976e+07 3.0452e+07 1.78374e+07 271 1.77276e+07 7.38085e+06 0.00261897 1.80783e+07 50.4898 0.109986 0.995466 0 50.0558 GTEX-13PVQ-0011-R9b-SM-5LU3B C1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 730 BP-47526 RNA isolation_PAXgene Tissue miRNA 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991984 542166 0.954306 0.99399 0.814864 22966 1 76 0.003754 283 0 8.53337e+07 0.0454367 4.81047e+06 8.58496e+07 9.04637e+06 22990 4.24776e+07 0 0.139442 0.99399 0.809966 8.53337e+07 0.00378261 1.88739e+07 2.10012e+07 1.90259e+07 293 1.87272e+07 8.90100e+06 0.00376828 1.93453e+07 50.8118 0.0560337 0.995996 0 50.2006 GTEX-13PVQ-0126-SM-5SIB4 0 C1 6 pieces; well trimmed; 10% intradermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 846 1177 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 EXCLUDE 0.989949 285181 0.97711 0.992156 0.881351 22748 1 76 0.00184793 289 0 9.32086e+07 0.0226644 566394 9.39455e+07 9.73129e+06 22758 4.63816e+07 0 0.0957593 0.992156 0.874438 9.32086e+07 0.00301544 2.03815e+07 1.63601e+07 2.04756e+07 262 2.04004e+07 2.17296e+07 0.00243039 2.06679e+07 50.3256 0.00602896 0.994363 0 50.1152 GTEX-13PVQ-0226-SM-5SIBG 1 C1 2 pieces; 10% fibrovascular content 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 848 1175 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992511 325628 0.972278 0.994412 0.785737 23103 1 76 0.00191928 209 0 8.42144e+07 0.0274558 373335 8.46876e+07 7.96145e+06 23131 4.19245e+07 0 0.186541 0.994412 0.781346 8.42144e+07 0.00301308 1.8442e+07 9.24625e+06 1.85681e+07 216 1.853e+07 1.34628e+07 0.00246514 1.86385e+07 50.1459 0.00440838 0.996313 0 50.1703 GTEX-13PVQ-0326-SM-5K7YF 1 C1 2 pieces; 5% fat 8.4 Muscle Muscle - Skeletal 0011907 869 1155 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991749 121529 0.985412 0.994002 0.869094 18586 1 76 0.00240431 127 0 6.71346e+07 0.0143804 616310 6.75397e+07 1.32388e+07 18591 3.34438e+07 0 0.116318 0.994002 0.863882 6.71346e+07 0.00350588 1.48006e+07 8.69401e+06 1.46524e+07 156 1.46412e+07 1.38841e+07 0.00295384 1.49461e+07 50.5151 0.00912515 0.996256 0 49.7484 GTEX-13PVQ-0426-SM-5J1OG 0 C1 2 pieces; well trimmed; no fat 7.7 Nerve Nerve - Tibial 0001323 872 1153 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.988213 175802 0.96896 0.989799 0.771476 23415 1 76 0.00396607 143 0 7.02886e+07 0.0307808 201042 7.1013e+07 3.69157e+06 23456 3.49401e+07 0 0.197485 0.989799 0.763606 7.02886e+07 0.00460285 1.54376e+07 6.08325e+06 1.54842e+07 152 1.54938e+07 1.11831e+07 0.00428395 1.55368e+07 50.0693 0.00283106 0.991384 0 50.0755 GTEX-13PVQ-0526-SM-5LU8Q 1 C1 2 pieces; well trimmed; minimal plaque; focal calcification 7.6 Blood Vessel Artery - Tibial 0007610 874 1152 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990655 311233 0.974729 0.992708 0.816619 21649 1 76 0.00444156 136 0 6.60742e+07 0.0249131 165197 6.65595e+07 5.6274e+06 21665 3.28412e+07 0 0.15811 0.992708 0.810665 6.60742e+07 0.0038717 1.42981e+07 5.23258e+06 1.43823e+07 146 1.43908e+07 1.268e+07 0.00415722 1.44264e+07 50.0618 0.00248194 0.994762 0 50.1468 GTEX-13PVQ-0626-SM-5LU47 0 C1 6 pieces; 1-2 hairs per piece; well trimmed; 10-20% intradermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 890 1136 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991129 164682 0.972034 0.992953 0.755036 23591 1 76 0.00390585 147 0 6.96942e+07 0.0277495 400619 7.01889e+07 8.63709e+06 23618 3.46982e+07 0 0.216998 0.992953 0.749715 6.96942e+07 0.00384095 1.5365e+07 7.66934e+06 1.54187e+07 147 1.54326e+07 1.07884e+07 0.00387346 1.54741e+07 50.0671 0.00570773 0.994776 0 50.0871 GTEX-13PVQ-0726-SM-5L3GI 2 C1 2 pieces; 10% fibrous tissue in 1 piece 6.4 Thyroid Thyroid 0002046 898 1129 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989759 334905 0.965607 0.992187 0.716778 23756 1 76 0.0023709 139 0 7.16128e+07 0.0341496 291554 7.21767e+07 5.57843e+06 23796 3.56202e+07 0 0.24883 0.992187 0.711178 7.16128e+07 0.00324367 1.56804e+07 8.06854e+06 1.57385e+07 156 1.57743e+07 9.75838e+06 0.00280621 1.58082e+07 50.0536 0.00403945 0.994616 0 50.0925 GTEX-13PVQ-0926-SM-5IJFD 1 C1 2 pieces; heart failure cells; fine interstitial fibrosis; large vein and bronchus in 1 piece 6.5 Lung Lung 0008952 902 1126 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986584 198126 0.971116 0.988206 0.742112 23809 1 76 0.00490129 133 0 7.5986e+07 0.0285491 194915 7.68929e+07 4.49715e+06 23842 3.77529e+07 0 0.229004 0.988206 0.733359 7.5986e+07 0.005206 1.66728e+07 6.61337e+06 1.68287e+07 150 1.6835e+07 1.13756e+07 0.0050534 1.67846e+07 49.925 0.00253489 0.989827 0 50.2327 GTEX-13PVQ-1026-SM-5KM3M 1 C1 2 pieces; 1 with ducts in fibrofatty tissue; other without ducts 7.1 Breast Breast - Mammary Tissue 0008367 904 1125 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4821 03/23/2014 TruSeq.v1 RNASEQ 0.988201 215759 0.977932 0.990392 0.784424 21794 1 76 0.00322131 165 0 7.73333e+07 0.0217932 335831 7.80835e+07 4.83046e+06 21822 3.84638e+07 0 0.193507 0.990392 0.776887 7.73333e+07 0.00419939 1.69748e+07 8.45540e+06 1.71623e+07 183 1.71777e+07 1.20402e+07 0.00370927 1.71249e+07 49.9231 0.00430092 0.992582 0 50.2747 GTEX-13PVQ-1226-SM-5IJDC 1 C1 2 pieces; hypereosinophilic area in 1 piece consistent with ischemia 7.3 Heart Heart - Left Ventricle 0006566 908 1122 BP-46999 RNA Extraction from Paxgene-derived Lysate Plate Based 12/11/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991913 177804 0.983693 0.994156 0.868618 19603 1 76 0.00211117 264 0 7.56832e+07 0.0161954 3.29698e+06 7.61281e+07 8.5345e+06 19612 3.76832e+07 0 0.115075 0.994156 0.863541 7.56832e+07 0.00358945 1.7034e+07 1.55436e+07 1.67025e+07 292 1.65857e+07 8.76045e+06 0.00284864 1.7305e+07 51.0612 0.0433083 0.996398 0 49.5087 GTEX-13PVQ-1326-SM-5LU4J 1 C1 2 pieces; 1 has 60% fibroadipose tissue, other has 40% 6.7 Heart Heart - Atrial Appendage 0006631 910 1120 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99262 209333 0.977971 0.994497 0.810411 21619 1 76 0.00360672 155 0 7.86667e+07 0.0217793 2.24768e+06 7.9102e+07 9.75386e+06 21644 3.91808e+07 0 0.16756 0.994497 0.805951 7.86667e+07 0.00354105 1.69378e+07 9.33772e+06 1.69699e+07 190 1.6965e+07 1.20873e+07 0.00357395 1.70807e+07 50.17 0.028415 0.996373 0 50.0473 GTEX-13PVQ-1426-SM-5J1O4 1 C1 6 pieces; plaques up to 1.5mm thick 6.3 Blood Vessel Artery - Aorta 0001496 911 1120 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.985293 215757 0.970111 0.986882 0.767605 23531 1 76 0.00418029 168 0 9.15685e+07 0.0296012 136061 9.27856e+07 5.67192e+06 23568 4.54469e+07 0 0.202506 0.986882 0.757535 9.15685e+07 0.00500448 1.96737e+07 8.21852e+06 1.97622e+07 199 1.97574e+07 1.49064e+07 0.00459172 1.98262e+07 50.0869 0.0014664 0.988472 0 50.1122 GTEX-13PVQ-1526-SM-5IFEQ 1 C1 2 pieces; thick fibrous trabeculae 6.2 Liver Liver 0001114 913 1118 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989617 238875 0.978545 0.992412 0.818979 20275 1 76 0.00216073 162 0 7.21436e+07 0.021038 1.73012e+06 7.26952e+07 7.40241e+06 20289 3.5864e+07 0 0.159566 0.992412 0.812764 7.21436e+07 0.00377471 1.5959e+07 9.72954e+06 1.59754e+07 190 1.59703e+07 1.0651e+07 0.00296545 1.61585e+07 50.2928 0.0237997 0.995206 0 50.0257 GTEX-13PVQ-1726-SM-5IFF3 2 C1 4 pieces; partially sloughed 6.3 Esophagus Esophagus - Mucosa 0006920 916 1117 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989755 199974 0.971126 0.992355 0.794536 22403 1 76 0.00222085 139 0 6.59476e+07 0.0286663 373974 6.64557e+07 7.03468e+06 22422 3.27896e+07 0 0.17659 0.992355 0.788462 6.59476e+07 0.00378476 1.47456e+07 7.72658e+06 1.47406e+07 163 1.47305e+07 9.86645e+06 0.00300076 1.4927e+07 50.3313 0.00562742 0.994955 0 49.9915 GTEX-13PVQ-1826-SM-5L3GU 2 C1 6 pieces 6.4 Esophagus Esophagus - Muscularis 0004648 917 1116 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.988483 218518 0.970051 0.99114 0.772215 21483 1 76 0.00231618 135 0 6.31493e+07 0.029783 972459 6.37138e+07 4.92987e+06 21507 3.13951e+07 0 0.197836 0.99114 0.765372 6.31493e+07 0.00334209 1.37258e+07 5.92387e+06 1.3721e+07 159 1.37241e+07 8.02259e+06 0.00282776 1.38803e+07 50.2829 0.0152629 0.993795 0 49.9912 GTEX-13PVQ-1926-SM-5L3GN 2 C1 6 pieces; well trimmed 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 918 1116 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.991269 176371 0.972192 0.993462 0.769491 22643 1 76 0.00228728 154 0 7.34110e+07 0.0275804 583242 7.38942e+07 6.10483e+06 22674 3.65272e+07 0 0.202701 0.993462 0.76446 7.34110e+07 0.00299124 1.60184e+07 6.77515e+06 1.60198e+07 170 1.60172e+07 1.15576e+07 0.00263848 1.61716e+07 50.2398 0.00789293 0.995654 0 50.0022 GTEX-13PVQ-2126-SM-5L3FW 2 C1 6 pieces; chronic superficial gastritis 7.2 Stomach Stomach 0000945 920 1115 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.983055 222315 0.976025 0.985934 0.77393 22572 1 76 0.00342268 199 0 6.96352e+07 0.0209613 771465 7.06287e+07 5.41318e+06 22607 3.44776e+07 0 0.202095 0.985934 0.763043 6.96352e+07 0.004524 1.58101e+07 2.79534e+07 1.57956e+07 172 1.58924e+07 1.1355e+07 0.00397173 1.59056e+07 50.0208 0.0109228 0.988814 0 49.977 GTEX-13PVQ-2226-SM-5L3G9 1 C1 2 pieces; 1 has 20% fibrous content 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 921 1114 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.990567 217795 0.977177 0.992802 0.775238 22426 1 76 0.00227373 167 0 7.53052e+07 0.0225618 411613 7.58511e+07 5.59516e+06 22449 3.74733e+07 0 0.201939 0.992802 0.769658 7.53052e+07 0.00309602 1.65907e+07 9.23664e+06 1.66943e+07 185 1.67112e+07 1.16241e+07 0.00268395 1.67329e+07 50.0325 0.00542659 0.995038 0 50.1557 GTEX-13PVQ-2726-SM-5L3H7 2 C1 6 pieces; 3 have up to 0.7mm pericolic fat 6.1 Colon Colon - Sigmoid 0001159 932 1106 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.989915 194403 0.964733 0.992459 0.780779 22134 1 76 0.00233158 130 0 6.05064e+07 0.0350861 503485 6.09661e+07 4.64793e+06 22156 3.00856e+07 0 0.183954 0.992459 0.774891 6.05064e+07 0.00343311 1.29685e+07 6.60577e+06 1.30117e+07 151 1.29861e+07 8.25922e+06 0.00288094 1.31403e+07 50.2951 0.00825844 0.995003 0 50.0831 GTEX-13PVQ-2926-SM-5L3HJ 2 C1 4 pieces 5.8 Brain Brain - Cerebellum 0002037 938 1102 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4823 03/23/2014 TruSeq.v1 RNASEQ 0.987898 507886 0.930509 0.990806 0.697756 23272 1 76 0.00259742 124 0 5.96586e+07 0.0692563 2.3979e+06 6.02122e+07 5.08497e+06 23294 2.96486e+07 0 0.232754 0.990806 0.691341 5.96586e+07 0.00361598 1.26981e+07 2.16973e+07 1.27954e+07 147 1.27925e+07 4.94818e+06 0.00310521 1.28659e+07 50.143 0.0398241 0.993714 0 50.1908 GTEX-13PVQ-3026-SM-5SI93 2 C1 4 pieces; non-cortex fragments outlined 5.8 Brain Brain - Cortex 0001870 940 1102 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990873 319760 0.963875 0.993624 0.812912 24883 1 76 0.00205363 271 0 9.59815e+07 0.0358991 7.12576e+06 9.65974e+07 9.26172e+06 24906 4.7765e+07 0 0.150964 0.993624 0.807728 9.59815e+07 0.00327719 2.1093e+07 2.42541e+07 2.10033e+07 322 2.08512e+07 9.14702e+06 0.00266372 2.14885e+07 50.7526 0.0737676 0.996374 0 49.8934 GTEX-13PVR-0003-SM-5GYDY B1 Blood Whole Blood 0013756 -98 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13PVR-0003-SM-7DRNW B1 Blood Whole Blood 0013756 -98 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13PVR-0126-SM-5S2PY 1 B1 2 pieces, minimal steatosis, mulitple bile duct hamartomata (Meyenberg Complex) noted. 8.7 Liver Liver 0001114 106 701 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993738 250852 0.982727 0.994632 0.867812 18967 1 76 0.0016186 102 0 5.21994e+07 0.0164445 505022 5.24811e+07 2.8515e+06 18976 2.6e+07 0 0.114915 0.994632 0.863154 5.21994e+07 0.00225268 1.12995e+07 7.95864e+06 1.14338e+07 122 1.139e+07 1.17116e+07 0.00193536 1.13892e+07 49.9982 0.00962293 0.995526 0 50.2954 GTEX-13PVR-0226-SM-5RQJI 1 B1 4 pieces, cortex, ~10-20% adherent fat, rep foci delineated 9.5 Adrenal Gland Adrenal Gland 0002369 109 698 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992768 173231 0.978511 0.994053 0.833322 21543 1 76 0.0018342 155 0 7.02543e+07 0.021156 1.41736e+06 7.06747e+07 3.4711e+06 21560 3.50041e+07 0 0.145189 0.994053 0.828366 7.02543e+07 0.00246753 1.5463e+07 9.36526e+06 1.56487e+07 194 1.55977e+07 1.17277e+07 0.00215045 1.55836e+07 49.9773 0.0200546 0.995337 0 50.2984 GTEX-13PVR-0326-SM-5RQJY 1 B1 2 pieces, mild congestion 7.7 Spleen Spleen 0002106 110 697 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99212 264548 0.96476 0.992955 0.772812 25055 1 76 0.00217316 275 0 1.05771e+08 0.0345964 599777 1.06522e+08 5.46072e+06 25092 5.26788e+07 0 0.191948 0.992955 0.767368 1.05771e+08 0.00279251 2.32148e+07 1.18762e+07 2.34254e+07 293 2.33874e+07 1.71455e+07 0.00248257 2.33407e+07 49.95 0.00563057 0.993791 0 50.2257 GTEX-13PVR-0426-SM-5RQK2 0 B1 6 pieces, minimal dermal fat (delineated); squamous epithelium is ~45-50 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 113 694 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993738 110465 0.971802 0.994458 0.803777 23356 1 76 0.00188851 175 0 6.95189e+07 0.0279846 471443 6.99063e+07 3.27188e+06 23374 3.46463e+07 0 0.168024 0.994458 0.799323 6.95189e+07 0.00256725 1.5307e+07 6.62506e+06 1.5438e+07 170 1.53845e+07 1.20892e+07 0.00222764 1.5411e+07 50.043 0.00674392 0.995177 0 50.2129 GTEX-13PVR-0526-SM-5S2OB 1 B1 2 pieces, no abnormalities, minimal fascia/fibrous tissue 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 113 694 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991808 236192 0.974614 0.994047 0.826269 22122 1 76 0.00161359 152 0 6.50853e+07 0.0251142 556528 6.5475e+07 4.60829e+06 22140 3.2381e+07 0 0.148345 0.994047 0.82135 6.50853e+07 0.0024402 1.42345e+07 6.21742e+06 1.44586e+07 170 1.4384e+07 1.08197e+07 0.00202596 1.44495e+07 50.1135 0.00849985 0.996286 0 50.3904 GTEX-13PVR-0626-SM-5S2RC 1 B1 2 pieces, nodular goitre 7.3 Thyroid Thyroid 0002046 115 692 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.989923 335107 0.969909 0.991363 0.773381 24134 1 76 0.00186481 166 0 7.93628e+07 0.0291204 347461 8.00543e+07 4.24555e+06 24167 3.94832e+07 0 0.196528 0.991363 0.766702 7.93628e+07 0.0025249 1.73691e+07 8.04656e+06 1.76037e+07 186 1.75601e+07 1.3356e+07 0.00219438 1.75204e+07 49.9434 0.00434032 0.992803 0 50.3355 GTEX-13PVR-0726-SM-5S2PX 1 B1 2 pieces, well-preserved; Islets well visualized (rep encircled). ? Small hamartoma, ensquared. 7.3 Pancreas Pancreas 0001150 119 688 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.990301 283718 0.975453 0.991507 0.873566 20521 1 76 0.00181539 111 0 7.39215e+07 0.0242881 227866 7.45547e+07 4.14269e+06 20531 3.68061e+07 0 0.101887 0.991507 0.866147 7.39215e+07 0.00260445 1.68722e+07 3.27239e+07 1.71996e+07 120 1.70776e+07 2.31753e+07 0.00220944 1.70935e+07 50.0233 0.00305636 0.992713 0 50.4804 GTEX-13PVR-0826-SM-5S2PV 1 B1 6 pieces, minimal atherosis 6.7 Blood Vessel Artery - Aorta 0001496 120 687 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993696 115587 0.975185 0.994962 0.839978 20729 1 76 0.00156911 142 0 6.35054e+07 0.0244787 231595 6.3827e+07 3.7809e+06 20740 3.16219e+07 0 0.135207 0.994962 0.835746 6.35054e+07 0.00248562 1.37272e+07 4.57619e+06 1.38903e+07 160 1.38132e+07 1.16348e+07 0.00202678 1.3886e+07 50.1313 0.00362848 0.996228 0 50.2952 GTEX-13PVR-0926-SM-5S2RB 1 B1 3 pieces, no abnormalities 7.9 Heart Heart - Atrial Appendage 0006631 121 686 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993532 110359 0.979735 0.994745 0.837966 20140 1 76 0.00146757 124 0 5.67945e+07 0.0200326 1.29764e+06 5.70946e+07 3.41012e+06 20148 2.83085e+07 0 0.141768 0.994745 0.833563 5.67945e+07 0.00221228 1.21652e+07 1.05141e+07 1.24012e+07 152 1.22993e+07 8.65823e+06 0.00183947 1.23269e+07 50.056 0.0227279 0.995959 0 50.4804 GTEX-13PVR-1026-SM-5QGQW 1 B1 2 pieces, minimal ischemic changes 8.6 Heart Heart - Left Ventricle 0006566 124 683 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992311 132133 0.986378 0.993216 0.856255 18894 1 76 0.00152981 153 0 6.19051e+07 0.0134122 1.77161e+06 6.2328e+07 3.69570e+06 18900 3.08734e+07 0 0.130123 0.993216 0.850446 6.19051e+07 0.00221916 1.35764e+07 1.95771e+07 1.33836e+07 184 1.33571e+07 9.62500e+06 0.00187417 1.36589e+07 50.5585 0.028424 0.99412 0 49.6423 GTEX-13PVR-1126-SM-5S2NX 1 B1 3 pieces (one vessel fragment--'fr'), adherent fat/connective tissue on one aliquot, delineated, ~2.5mm 6.7 Blood Vessel Artery - Coronary 0001621 131 676 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990469 1.03267e+06 0.911653 0.992771 0.772685 20572 1 76 0.00160237 125 0 5.9821e+07 0.0879338 396924 6.02566e+07 3.98183e+06 20581 2.97483e+07 0 0.138968 0.992771 0.767099 5.9821e+07 0.00260124 1.19527e+07 4.40374e+07 1.21981e+07 135 1.21404e+07 1.07577e+07 0.00210065 1.21705e+07 50.062 0.00658723 0.995072 0 50.5079 GTEX-13PVR-1226-SM-5RQJ2 1 B1 2 pieces, typical post menopausal atrophy, prominent hilar vessels 8.2 Ovary Ovary 0000992 137 670 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990577 131872 0.969454 0.991563 0.77828 21871 1 76 0.00198382 128 0 5.40087e+07 0.0302853 259499 5.44683e+07 2.58178e+06 21899 2.68712e+07 0 0.191175 0.991563 0.771713 5.40087e+07 0.00290958 1.189e+07 5.00011e+06 1.19922e+07 136 1.19385e+07 8.81043e+06 0.00244624 1.20008e+07 50.1302 0.00476422 0.992548 0 50.2138 GTEX-13PVR-1426-SM-5S2PW 1 B1 2 pieces, squamous mucosa is ~75 microns. Diffuse mild chronic vaginitis 7.7 Vagina Vagina 0000996 134 673 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993194 104361 0.972544 0.994024 0.800067 22906 1 76 0.0017744 128 0 5.34934e+07 0.0269046 160678 5.3815e+07 2.98062e+06 22920 2.66561e+07 0 0.172477 0.994024 0.795286 5.34934e+07 0.00239555 1.18548e+07 5.12355e+06 1.20089e+07 128 1.19723e+07 9.53211e+06 0.00208471 1.19365e+07 49.9251 0.00298575 0.994854 0 50.3228 GTEX-13PVR-1626-SM-73KVF 1 B1 6 pieces, mucosa well preserved, ~0.35mm, ~10% thickness 7.2 Colon Colon - Transverse 0001157 144 663 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991084 308409 0.975201 0.992231 0.829055 24127 1 76 0.00393931 272 0 9.95367e+07 0.0242932 2.39907e+06 1.00316e+08 4.65133e+06 24157 4.95264e+07 0 0.146145 0.992231 0.822614 9.95367e+07 0.00410417 2.1828e+07 1.47544e+07 2.22015e+07 320 2.21011e+07 1.40887e+07 0.00402165 2.20359e+07 49.9262 0.0239151 0.993378 0 50.4241 GTEX-13PVR-1726-SM-5Q5EC 1 B1 6 pieces, all muscularis, good specimens 8.2 Colon Colon - Sigmoid 0001159 148 659 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.992064 141844 0.977901 0.994101 0.857317 21881 1 76 0.0018938 281 0 8.31881e+07 0.0217915 935261 8.36818e+07 1.12248e+07 21899 4.14294e+07 0 0.120585 0.994101 0.852259 8.31881e+07 0.00315148 1.80366e+07 7.76549e+06 1.81238e+07 263 1.80742e+07 1.53354e+07 0.00252135 1.8244e+07 50.2338 0.0111764 0.996137 0 50.1206 GTEX-13PVR-1826-SM-5Q5CC 1 B1 6 pieces, squamous mucosa hyperplastic, up to 0.8mm, 20-40% thickness 8.7 Esophagus Esophagus - Mucosa 0006920 155 652 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990204 223573 0.980499 0.992916 0.867717 20607 1 76 0.00179721 142 0 6.23769e+07 0.0192456 478909 6.2822e+07 4.9193e+06 20615 3.10179e+07 0 0.112782 0.992916 0.86157 6.23769e+07 0.00307882 1.40315e+07 8.77677e+06 1.4055e+07 153 1.40334e+07 1.35856e+07 0.00243627 1.42232e+07 50.3358 0.00762327 0.995629 0 50.0418 GTEX-13PVR-2026-SM-73KXT 1 B1 6 pieces, all muscularis, good specimens. 9.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 160 647 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994299 292648 0.978827 0.995495 0.85368 21046 1 76 0.00234746 170 0 7.04713e+07 0.0208425 609781 7.07902e+07 7.09609e+06 21060 3.51147e+07 0 0.125147 0.995495 0.849834 7.04713e+07 0.00288782 1.52912e+07 5.80486e+06 1.53804e+07 176 1.53748e+07 1.30991e+07 0.00261732 1.53753e+07 50.0009 0.00861391 0.996691 0 50.1454 GTEX-13PVR-2126-SM-73KVR 1 B1 6 pieces; mucosa well-preserved, ~0.6-0.8mm, ~15% of thickness. Excellent specimen. 6.6 Stomach Stomach 0000945 161 646 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.983581 146124 0.980198 0.985145 0.827449 22332 1 76 0.00393869 317 0 8.34499e+07 0.0195377 1.59275e+06 8.47082e+07 4.00033e+06 22356 4.15192e+07 0 0.152749 0.985145 0.815158 8.34499e+07 0.00431022 1.89867e+07 8.69516e+07 1.94966e+07 236 1.94409e+07 1.90319e+07 0.00412416 1.91735e+07 49.6537 0.0188028 0.98671 0 50.6626 GTEX-13PVR-2226-SM-7DHKP 0 B1 2 pieces, typical post menopausal regressive/atrophic changes; rep TDLUs delineated. 7.8 Breast Breast - Mammary Tissue 0008367 167 640 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990517 146600 0.971543 0.991573 0.79505 24625 1 76 0.00340274 168 0 8.31496e+07 0.0280883 599604 8.38562e+07 6.36600e+06 24651 4.13728e+07 0 0.176493 0.991573 0.78835 8.31496e+07 0.00518705 1.82571e+07 7.63447e+06 1.84788e+07 196 1.84869e+07 1.37477e+07 0.00429395 1.83298e+07 49.7866 0.00715038 0.992628 0 50.3018 GTEX-13PVR-2326-SM-5QGR1 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~50-60 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 242 565 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992809 174304 0.976081 0.994192 0.841492 21799 1 76 0.00179925 164 0 6.00304e+07 0.0236647 344628 6.03811e+07 4.22298e+06 21814 2.99032e+07 0 0.134588 0.994192 0.836605 6.00304e+07 0.00279577 1.31117e+07 6.2388e+06 1.32211e+07 152 1.31823e+07 1.11918e+07 0.00229682 1.32342e+07 50.0983 0.00570754 0.995574 0 50.2078 GTEX-13PVR-2426-SM-5RQHN 0 B1 2 pieces, minimal fibrous/fascial tissue 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 245 562 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992329 161412 0.976717 0.993405 0.81883 22830 1 76 0.00191731 162 0 6.94772e+07 0.0229931 481176 6.99385e+07 3.53258e+06 22850 3.45946e+07 0 0.157887 0.993405 0.81343 6.94772e+07 0.00278165 1.53262e+07 5.86772e+06 1.54733e+07 171 1.54467e+07 1.22162e+07 0.00234901 1.54276e+07 49.9691 0.00687999 0.99448 0 50.2389 GTEX-13PVR-2526-SM-5RQIT 0 B1 2 pieces ~20% interstitial fat, rep foci delineated 7.9 Muscle Muscle - Skeletal 0011907 246 561 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993192 226098 0.985522 0.994198 0.896316 17871 1 76 0.00173145 145 0 6.00837e+07 0.0142628 874700 6.04343e+07 3.10230e+06 17873 2.99148e+07 0 0.0892061 0.994198 0.891116 6.00837e+07 0.00261242 1.32015e+07 6.17449e+06 1.33662e+07 160 1.33256e+07 1.21102e+07 0.00217149 1.32951e+07 49.9427 0.0144736 0.995205 0 50.3101 GTEX-13PVR-2626-SM-7DHKQ 0 B1 2 pieces, clean specimen 8.3 Nerve Nerve - Tibial 0001323 248 559 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990203 149433 0.971673 0.99123 0.787248 23672 1 76 0.0034773 190 0 7.92234e+07 0.0280296 269096 7.99244e+07 6.26287e+06 23701 3.94091e+07 0 0.184424 0.99123 0.780344 7.92234e+07 0.00533371 1.74821e+07 6.36141e+06 1.76463e+07 177 1.76649e+07 1.37725e+07 0.00440454 1.75381e+07 49.8199 0.00336688 0.992257 0 50.2338 GTEX-13PVR-2726-SM-5SI6H 0 B1 2 pieces, clean specimen, no atherosis 7.5 Blood Vessel Artery - Tibial 0007610 253 554 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990585 240958 0.975326 0.993344 0.825626 21818 1 76 0.00183468 173 0 7.89793e+07 0.0242785 299489 7.95085e+07 7.43442e+06 21837 3.9277e+07 0 0.149699 0.993344 0.820131 7.89793e+07 0.00323325 1.70764e+07 5.78809e+06 1.72238e+07 191 1.72127e+07 1.5083e+07 0.00253202 1.72941e+07 50.118 0.00376675 0.996103 0 50.2149 GTEX-13PVR-5001-SM-AN416 B1 Heart Heart - Left Ventricle 0006566 125 ChIP-Seq GTEX-13PVR-5016-SM-AN417 B1 Muscle Muscle - Skeletal 0011907 247 ChIP-Seq GTEX-13QBU-0003-SM-5DU3V B1 Blood Whole Blood 0013756 -230 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13QBU-0003-SM-5HJRN_1 B1 Blood Whole Blood 0013756 -230 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13QBU-0003-SM-6WSD1 B1 Blood Whole Blood 0013756 -230 BP-44895 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13QBU-0126-SM-5LU3V 1 B1 2 pieces, no atherosis, adherent fat up to ~2mm 7 Blood Vessel Artery - Coronary 0001621 101 1296 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992723 136223 0.971332 0.994325 0.799409 22867 1 76 0.00375011 136 0 6.78722e+07 0.0284427 460828 6.82595e+07 7.69811e+06 22886 3.38121e+07 0 0.171923 0.994325 0.794873 6.78722e+07 0.00358994 1.47213e+07 5.77395e+06 1.48264e+07 151 1.47654e+07 1.09326e+07 0.00367015 1.48873e+07 50.2055 0.00675111 0.995928 0 50.1779 GTEX-13QBU-0226-SM-5LU48 1 B1 2 pieces, ~40% fat, rep focus delineated 8.3 Heart Heart - Atrial Appendage 0006631 105 1292 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993031 148163 0.978888 0.994625 0.82218 20930 1 76 0.0036974 151 0 7.19351e+07 0.0208898 1.33775e+06 7.23239e+07 8.98066e+06 20945 3.58536e+07 0 0.156708 0.994625 0.817761 7.19351e+07 0.00350046 1.55389e+07 1.17594e+07 1.54666e+07 175 1.5405e+07 1.06388e+07 0.00359909 1.57045e+07 50.4813 0.0184967 0.99622 0 49.8833 GTEX-13QBU-0326-SM-5LU3F 1 B1 6 pieces, minimal atherosis, adherent serosa up to ~1mm, rep. delineated 7.6 Blood Vessel Artery - Aorta 0001496 110 1287 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992481 141492 0.974243 0.994105 0.81925 21738 1 76 0.00374356 142 0 6.86584e+07 0.0254242 255414 6.90655e+07 7.90964e+06 21755 3.41991e+07 0 0.154993 0.994105 0.814421 6.86584e+07 0.00353986 1.49112e+07 5.59758e+06 1.49814e+07 149 1.49623e+07 1.25554e+07 0.00364188 1.5039e+07 50.1278 0.00369814 0.99573 0 50.1175 GTEX-13QBU-0426-SM-5J2O4 1 B1 2 pieces, minimal fibrosis 9.2 Heart Heart - Left Ventricle 0006566 114 1283 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984897 165950 0.983957 0.989022 0.856565 21121 1 76 0.00426517 198 0 8.6968e+07 0.0157539 1.83682e+06 8.79334e+07 4.92281e+06 21135 4.32008e+07 0 0.127392 0.989022 0.847162 8.6968e+07 0.00591753 1.92005e+07 1.68729e+07 1.91822e+07 226 1.91957e+07 1.5441e+07 0.00508791 1.95005e+07 50.3939 0.0208887 0.993148 0 49.9761 GTEX-13QBU-0526-SM-5IJFE 1 B1 2 pieces, cortex, adherent fat is ~ 30% tissue, delineated 9.2 Adrenal Gland Adrenal Gland 0002369 126 1271 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984881 218912 0.977745 0.986668 0.827913 22141 1 76 0.00483683 158 0 7.86997e+07 0.021916 1.43221e+06 7.9763e+07 5.17897e+06 22159 3.91397e+07 0 0.149832 0.986668 0.816875 7.86997e+07 0.00503797 1.72813e+07 1.1943e+07 1.73619e+07 182 1.73633e+07 1.25446e+07 0.00493722 1.74152e+07 50.0745 0.0179558 0.988455 0 50.1163 GTEX-13QBU-0626-SM-5J2OG 1 B1 2 pieces, no abnormalities 7.3 Thyroid Thyroid 0002046 137 1260 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983343 206042 0.969112 0.987457 0.735336 23957 1 76 0.00438917 137 0 7.94212e+07 0.0306483 482526 8.043e+07 4.49556e+06 24000 3.94161e+07 0 0.233776 0.987457 0.726113 7.94212e+07 0.00609667 1.73958e+07 7.23286e+06 1.74954e+07 152 1.75645e+07 1.14764e+07 0.00523936 1.76267e+07 50.0884 0.00599933 0.991571 0 50.1427 GTEX-13QBU-0726-SM-5J2OA 1 B1 2 pieces. minimal congestion, well-preserved bronchial mucosa delineated 8.8 Lung Lung 0008952 149 1248 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984436 428763 0.977235 0.988317 0.783123 26242 1 76 0.00438007 380 0 1.62674e+08 0.0224443 785153 1.64597e+08 9.19035e+06 26306 8.07548e+07 0 0.194111 0.988317 0.773974 1.62674e+08 0.00599568 3.60347e+07 1.45394e+07 3.63032e+07 347 3.64686e+07 2.96414e+07 0.0051847 3.64669e+07 49.9988 0.00477016 0.992199 0 50.1856 GTEX-13QBU-0826-SM-5IJBU 1 B1 6 pieces, adherent serosa up to ~2mm on several sections, delineated, o/w all muscularis, good specimens 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 163 1234 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989519 231680 0.973928 0.99266 0.809469 23086 1 76 0.00218406 210 0 8.37684e+07 0.0257727 499252 8.43878e+07 1.20263e+07 23108 4.16541e+07 0 0.164459 0.99266 0.803528 8.37684e+07 0.00375029 1.81752e+07 7.58905e+06 1.82492e+07 218 1.82444e+07 1.47888e+07 0.00296469 1.84316e+07 50.2552 0.00591616 0.995802 0 50.1016 GTEX-13QBU-0926-SM-5K7WQ 1 B1 6 pieces, all muscularis, good specimens 8.4 Esophagus Esophagus - Muscularis 0004648 166 1231 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990436 126664 0.974528 0.992665 0.806263 21905 1 76 0.00264781 209 0 8.13895e+07 0.0252067 685175 8.19909e+07 1.57589e+07 21931 4.05245e+07 0 0.168264 0.992665 0.800349 8.13895e+07 0.00370767 1.76066e+07 7.59595e+06 1.76543e+07 210 1.76135e+07 1.32153e+07 0.00317655 1.78182e+07 50.2889 0.00835672 0.994894 0 50.0676 GTEX-13QBU-1026-SM-5LU3R 1 B1 6 pieces, squamous mucosa is ~15% thickness 9.1 Esophagus Esophagus - Mucosa 0006920 171 1226 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992589 145975 0.977023 0.994374 0.819699 21431 1 76 0.0036949 137 0 6.67047e+07 0.0226291 343910 6.70822e+07 8.45016e+06 21446 3.3228e+07 0 0.157324 0.994374 0.815087 6.67047e+07 0.00363211 1.50731e+07 7.94914e+06 1.50948e+07 143 1.50981e+07 1.31417e+07 0.00366356 1.5186e+07 50.1452 0.0051267 0.996159 0 50.0361 GTEX-13QBU-1126-SM-5LU44 1 B1 6 pieces, mucosa well-preserved, good specimens, up to ~0.8mm, ~35-50% of thickness 7.3 Stomach Stomach 0000945 179 1218 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.986897 133981 0.980124 0.988874 0.838704 21823 1 76 0.00364316 230 0 6.79533e+07 0.0194211 664884 6.87179e+07 8.76392e+06 21838 3.38402e+07 0 0.14142 0.988874 0.829372 6.79533e+07 0.00371794 1.54722e+07 6.86297e+07 1.5747e+07 162 1.57398e+07 1.71219e+07 0.00368047 1.56231e+07 49.814 0.00967556 0.99085 0 50.4401 GTEX-13QBU-1226-SM-5LU4G 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~30 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 187 1210 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.986632 592791 0.970626 0.990045 0.795827 23652 1 76 0.00370134 172 0 7.67564e+07 0.0291629 738372 7.75282e+07 9.23364e+06 23677 3.8108e+07 0 0.1748 0.990045 0.787904 7.67564e+07 0.00372906 1.69167e+07 1.08453e+07 1.70041e+07 176 1.70299e+07 1.26065e+07 0.00371515 1.71499e+07 50.1756 0.00952391 0.993459 0 50.1289 GTEX-13QBU-1326-SM-5LU4K 1 B1 2 pieces, minimal fibrosis 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 190 1207 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992384 202578 0.978694 0.994269 0.838684 21559 1 76 0.00366312 145 0 6.50455e+07 0.0210623 384559 6.54204e+07 8.41025e+06 21572 3.23945e+07 0 0.14001 0.994269 0.833877 6.50455e+07 0.00361741 1.43473e+07 5.87112e+06 1.44288e+07 153 1.44177e+07 1.1491e+07 0.00364031 1.44804e+07 50.1084 0.00587827 0.996153 0 50.1416 GTEX-13QBU-1526-SM-5LU3W 1 B1 2 pieces, 1.5mm follicular cyst, few embedded eggs delineated in cortex 7.3 Ovary Ovary 0000992 213 1184 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991628 256451 0.966345 0.993666 0.749725 23589 1 76 0.00379048 149 0 7.86116e+07 0.033397 209670 7.91128e+07 8.87128e+06 23630 3.91286e+07 0 0.21662 0.993666 0.744976 7.86116e+07 0.00369393 1.72426e+07 8.48054e+06 1.73429e+07 159 1.73653e+07 1.33228e+07 0.0037423 1.738e+07 50.0211 0.00265027 0.995703 0 50.145 GTEX-13QBU-1626-SM-5LU4S 1 B1 2 pieces, large myometrium, ~1.5mm thick foci of weakly proliferative endometrium delineated 7.5 Uterus Uterus 0000995 217 1180 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99088 163265 0.967068 0.992788 0.751916 22767 1 76 0.00384787 133 0 6.71792e+07 0.0326695 168733 6.76672e+07 7.71502e+06 22794 3.34418e+07 0 0.215152 0.992788 0.746493 6.71792e+07 0.00378172 1.45346e+07 5.67724e+06 1.46083e+07 141 1.45808e+07 1.04697e+07 0.00381486 1.46868e+07 50.1811 0.00249357 0.994695 0 50.1266 GTEX-13QBU-1726-SM-5IJFQ 0 B1 6 pieces, well-glycogenated squamous mucosa up to ~0.2mm 8.3 Vagina Vagina 0000996 222 1175 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986446 340742 0.970904 0.98828 0.768193 25090 1 76 0.00468689 213 0 1.00656e+08 0.0288759 251286 1.01849e+08 6.68643e+06 25126 5.00349e+07 0 0.202711 0.98828 0.75919 1.00656e+08 0.00507264 2.22969e+07 1.11742e+07 2.24409e+07 217 2.2485e+07 1.7076e+07 0.00487941 2.24371e+07 49.9467 0.00246723 0.990114 0 50.161 GTEX-13QBU-1826-SM-5IJG3 1 B1 6 pieces, mucosa fairly well preserved, ~0.3mm, ~10-15% thickness 7.5 Colon Colon - Transverse 0001157 230 1167 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987699 174239 0.976737 0.989233 0.79782 23288 1 76 0.00467862 274 0 8.85319e+07 0.0230441 1.8727e+06 8.94956e+07 5.24201e+06 23322 4.40483e+07 0 0.178917 0.989233 0.78923 8.85319e+07 0.00480184 1.95059e+07 1.835e+07 1.9764e+07 259 1.96461e+07 1.06048e+07 0.00474013 1.9751e+07 50.1332 0.0209251 0.990767 0 50.3286 GTEX-13QBU-1926-SM-5IJEW 1 B1 6 pieces, well preserved, abundant lymphoidd aggregates up to ~50% total tissue, rep. delineated 6.9 Small Intestine Small Intestine - Terminal Ileum 0001211 236 1161 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986796 161962 0.968 0.988496 0.764964 25687 1 76 0.00482944 165 0 8.95841e+07 0.0316966 545571 9.06267e+07 6.19146e+06 25730 4.4534e+07 0 0.203036 0.988496 0.756163 8.95841e+07 0.00494799 1.96311e+07 9.91525e+06 1.98333e+07 201 1.98388e+07 1.29038e+07 0.00488861 1.97752e+07 49.9197 0.00601998 0.990195 0 50.2561 GTEX-13QBU-2026-SM-5KLZB 1 B1 6 pieces, all muscularis 7.8 Colon Colon - Sigmoid 0001159 245 1152 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987832 144528 0.972832 0.990288 0.78346 22795 1 76 0.00378477 166 0 8.31463e+07 0.0269454 561508 8.39618e+07 3.79098e+06 22823 4.13331e+07 0 0.189372 0.990288 0.775851 8.31463e+07 0.00493666 1.7956e+07 6.85226e+06 1.80618e+07 189 1.80503e+07 1.25902e+07 0.00435929 1.81582e+07 50.1489 0.00668766 0.992744 0 50.1469 GTEX-13QBU-2126-SM-5KLZN 0 B1 2 pieces, one is all mucosa/stroma; the other is ~70% well preserved glandular tissue, delineated. Best for TMA/LCM studies. 8.9 Salivary Gland Minor Salivary Gland 0006330 253 1144 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.988144 200000 0.975122 0.990602 0.798589 22876 1 76 0.00385197 140 0 7.22612e+07 0.0246235 294818 7.29468e+07 3.22785e+06 22896 3.59378e+07 0 0.176532 0.990602 0.791084 7.22612e+07 0.00491865 1.61055e+07 8.41534e+06 1.62633e+07 152 1.62844e+07 1.30475e+07 0.00438399 1.62533e+07 49.9521 0.00404155 0.993059 0 50.2438 GTEX-13QBU-2226-SM-5K7WI 0 B1 2 pieces, no atherosis, good clean specimen 7.9 Blood Vessel Artery - Tibial 0007610 268 1129 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986224 203877 0.973547 0.988619 0.834467 21910 1 76 0.00428956 279 0 1.02594e+08 0.0260729 447383 1.03775e+08 6.87732e+06 21929 5.09951e+07 0 0.13908 0.988619 0.82497 1.02594e+08 0.00503414 2.18584e+07 8.76996e+06 2.21744e+07 256 2.21463e+07 2.01329e+07 0.00466095 2.21259e+07 49.977 0.00431107 0.991015 0 50.3588 GTEX-13QBU-2326-SM-5LU49 0 B1 4 pieces, no adherent fat, good clean specimens 5.9 Nerve Nerve - Tibial 0001323 272 1125 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990792 217752 0.967803 0.992921 0.728897 23467 1 76 0.0038313 146 0 6.74958e+07 0.0319307 340613 6.7977e+07 7.89969e+06 23503 3.35748e+07 0 0.238906 0.992921 0.723737 6.74958e+07 0.00395045 1.48688e+07 6.1795e+06 1.49243e+07 146 1.4915e+07 9.93896e+06 0.00389075 1.50195e+07 50.1747 0.00501071 0.99505 0 50.093 GTEX-13QBU-2426-SM-5LU4L 0 B1 2 pieces, !0% interstitial fat, rep. delineated 7.6 Muscle Muscle - Skeletal 0011907 276 1121 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993411 208487 0.983055 0.994903 0.877031 19480 1 76 0.00352137 217 0 8.29793e+07 0.0167241 658773 8.34044e+07 9.81019e+06 19486 4.13625e+07 0 0.106024 0.994903 0.872561 8.29793e+07 0.00329937 1.83192e+07 1.15923e+07 1.8225e+07 243 1.8224e+07 1.65559e+07 0.00341054 1.84323e+07 50.2842 0.00789854 0.996395 0 49.8712 GTEX-13QBU-2526-SM-5LU4X 0 B1 2 pieces, minimal fibrous tissue (~10%); rep delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 277 1120 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990558 281792 0.978266 0.992422 0.826868 22181 1 76 0.00375553 167 0 7.94909e+07 0.0214533 242477 8.00979e+07 9.48788e+06 22206 3.959e+07 0 0.151399 0.992422 0.820602 7.94909e+07 0.00362956 1.74716e+07 7.95991e+06 1.75814e+07 184 1.75954e+07 1.48162e+07 0.00369266 1.76006e+07 50.0073 0.00302726 0.994286 0 50.1566 GTEX-13QBU-5001-SM-AN419 B1 Heart Heart - Left Ventricle 0006566 122 ChIP-Seq GTEX-13QBU-5004-SM-AN41B B1 Lung Lung 0008952 148 ChIP-Seq GTEX-13QBU-5016-SM-AN41D B1 Muscle Muscle - Skeletal 0011907 275 ChIP-Seq GTEX-13QIC-0004-SM-5DU5F B1 Blood Whole Blood 0013756 619 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13QIC-0004-SM-5HJR4 B1 Blood Whole Blood 0013756 619 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13QIC-0004-SM-6WSCY B1 Blood Whole Blood 0013756 619 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13QIC-0011-R10a-SM-5O9C7 B1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 619 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.987945 761868 0.953763 0.990027 0.824031 25346 1 76 0.00341173 373 0 1.16654e+08 0.0458549 4.17202e+06 1.17829e+08 4.75365e+06 25371 5.79646e+07 0 0.129732 0.990027 0.815813 1.16654e+08 0.00435053 2.52731e+07 2.57675e+07 2.54978e+07 352 2.5548e+07 1.36008e+07 0.00388014 2.54546e+07 49.9084 0.0354074 0.992108 0 50.2213 GTEX-13QIC-0011-R11b-SM-5O9BU B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 619 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984665 934555 0.939137 0.987014 0.742358 25411 1 76 0.00363829 373 0 1.36204e+08 0.0605594 4.23224e+06 1.37995e+08 5.54721e+06 25457 6.76257e+07 0 0.19678 0.987014 0.732718 1.36204e+08 0.00465197 2.89859e+07 3.53962e+07 2.94224e+07 374 2.94778e+07 1.2486e+07 0.00414392 2.92229e+07 49.7829 0.0306694 0.989364 0 50.3736 GTEX-13QIC-0011-R1a-SM-5O9CJ B1, A1 7.3 Brain Brain - Hippocampus 0001954 619 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986805 394048 0.962758 0.989186 0.807542 23832 1 76 0.00347833 274 0 9.79073e+07 0.0369324 4.89128e+06 9.89776e+07 4.10603e+06 23862 4.86402e+07 0 0.155216 0.989186 0.798809 9.79073e+07 0.00447325 2.15839e+07 1.52638e+07 2.1906e+07 321 2.18953e+07 1.11914e+07 0.00397459 2.18078e+07 49.9 0.049418 0.991567 0 50.3703 GTEX-13QIC-0011-R3a-SM-5P9HT B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 619 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991421 1.21177e+06 0.93926 0.99191 0.808537 24217 1 76 0.00299698 269 0 1.0088e+08 0.0604217 6.44521e+06 1.01703e+08 3.08337e+06 24232 5.02693e+07 0 0.130723 0.99191 0.801996 1.0088e+08 0.00324705 2.14141e+07 4.91678e+07 2.17991e+07 310 2.15832e+07 1.01514e+07 0.00312195 2.16939e+07 50.1279 0.0633731 0.992399 0 50.4455 GTEX-13QIC-0011-R4a-SM-5PNX8 B1, A1 5.9 Brain Brain - Amygdala 0001876 619 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988695 1.05072e+06 0.938299 0.989669 0.814072 24007 1 76 0.00299554 369 0 8.96438e+07 0.0614924 8.41557e+06 9.05796e+07 2.94543e+06 24029 4.46129e+07 0 0.124227 0.989669 0.805662 8.96438e+07 0.00357962 1.90321e+07 4.12225e+07 1.96862e+07 352 1.93705e+07 7.23025e+06 0.00328729 1.94433e+07 50.0937 0.092908 0.990642 0 50.8447 GTEX-13QIC-0011-R8b-SM-5O9CV B1, A1 7.1 Brain Brain - Hypothalamus 0001898 619 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.987115 639771 0.959972 0.989417 0.843732 24981 1 76 0.0034206 374 0 1.15587e+08 0.0397037 7.19241e+06 1.16824e+08 4.95183e+06 25009 5.74501e+07 0 0.11624 0.989417 0.834803 1.15587e+08 0.00435304 2.53161e+07 2.70119e+07 2.55891e+07 348 2.5602e+07 1.33911e+07 0.00388574 2.55395e+07 49.9389 0.0615664 0.991719 0 50.2682 GTEX-13QIC-1226-SM-5K7YR 1 B1 2 pieces; up to 10% internal fat 7.9 Muscle Muscle - Skeletal 0011907 820 484 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.991638 108172 0.981483 0.993955 0.865103 19109 1 76 0.00238649 109 0 5.35374e+07 0.0183222 673993 5.3863e+07 1.00712e+07 19118 2.66623e+07 0 0.11638 0.993955 0.859873 5.35374e+07 0.00357238 1.17479e+07 5.64101e+06 1.16719e+07 124 1.16813e+07 1.09223e+07 0.00297805 1.18529e+07 50.3644 0.0125131 0.996271 0 49.8377 GTEX-13QIC-1426-SM-5LU4V 1 B1 2 pieces; well trimmed 7.1 Nerve Nerve - Tibial 0001323 822 482 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99127 196092 0.969196 0.993261 0.753327 23691 1 76 0.00388196 148 0 6.88604e+07 0.0304828 222090 6.93276e+07 7.75297e+06 23733 3.42685e+07 0 0.215869 0.993261 0.748251 6.88604e+07 0.00385316 1.51987e+07 6.65786e+06 1.52433e+07 146 1.52529e+07 1.08571e+07 0.00386759 1.53237e+07 50.1158 0.00320349 0.995252 0 50.0733 GTEX-13QIC-1526-SM-5IJFL 1 B1 2 pieces; corpora albicantia 6.4 Ovary Ovary 0000992 826 478 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984287 378507 0.963589 0.986407 0.684753 24571 1 76 0.00483421 152 0 9.01164e+07 0.0361519 152605 9.13583e+07 6.14524e+06 24627 4.47049e+07 0 0.278836 0.986407 0.675445 9.01164e+07 0.0054037 1.96801e+07 1.27703e+07 1.98178e+07 162 1.98706e+07 1.36948e+07 0.00511834 1.9826e+07 49.9438 0.0016704 0.988526 0 50.1742 GTEX-13QIC-1626-SM-5K7TZ 2 B1 2 pieces; fragmented secondary to severe calcification, atherosclerosis 6.7 Blood Vessel Artery - Tibial 0007610 821 483 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983128 168255 0.976649 0.985618 0.85423 22167 1 76 0.00432184 155 0 7.50515e+07 0.0229894 166190 7.61467e+07 5.36846e+06 22182 3.72505e+07 0 0.122419 0.985618 0.841945 7.50515e+07 0.00509994 1.61364e+07 6.58727e+06 1.62438e+07 174 1.62534e+07 1.39772e+07 0.00470991 1.63129e+07 50.0913 0.0021825 0.988108 0 50.1658 GTEX-13QIC-1826-SM-5J1MY 1 B1 6 pieces; well trimmed 5.8 Vagina Vagina 0000996 830 474 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.984277 229643 0.966897 0.986138 0.711521 25660 1 76 0.00428071 169 0 9.72649e+07 0.0328287 338802 9.86322e+07 6.02394e+06 25715 4.82746e+07 0 0.255376 0.986138 0.701658 9.72649e+07 0.00503691 2.14171e+07 1.00664e+07 2.14532e+07 202 2.14572e+07 1.37914e+07 0.0046581 2.15963e+07 50.1615 0.003435 0.987998 0 50.0421 GTEX-13QIC-2026-SM-5N9G9 1 B1 6 pieces; well trimmed 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 834 470 BP-47051 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986595 295607 0.970709 0.987371 0.776443 23714 1 76 0.00403994 270 0 9.64624e+07 0.0290642 2.97383e+06 9.76962e+07 5.04432e+06 23750 4.78741e+07 0 0.194266 0.987371 0.766637 9.64624e+07 0.00411426 2.1275e+07 9.66174e+06 2.13092e+07 315 2.12436e+07 1.11141e+07 0.00407707 2.14158e+07 50.2018 0.0304396 0.988146 0 50.0403 GTEX-13QIC-2326-SM-5LU5N 1 B1 2 pieces; mostly fibroadipose tisue with ductal structures 6.7 Breast Breast - Mammary Tissue 0008367 838 466 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990428 208867 0.975039 0.992637 0.762287 24151 1 76 0.00382504 147 0 7.06823e+07 0.0244738 363820 7.12066e+07 8.1192e+06 24187 3.515e+07 0 0.212752 0.992637 0.756674 7.06823e+07 0.00394172 1.56789e+07 6.94583e+06 1.56874e+07 154 1.5707e+07 1.12734e+07 0.00388325 1.58173e+07 50.1749 0.00510936 0.994847 0 50.0136 GTEX-13QIC-2926-SM-5J2NF 1 B1 2 pieces 6.2 Brain Brain - Cortex 0001870 880 424 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983836 774526 0.943342 0.987931 0.806718 24187 1 76 0.00430341 199 0 8.48432e+07 0.0563684 3.6214e+06 8.58797e+07 4.82454e+06 24204 4.20988e+07 0 0.136625 0.987931 0.796981 8.48432e+07 0.00615029 1.80311e+07 3.6026e+07 1.84244e+07 240 1.83766e+07 8.48675e+06 0.00522302 1.83959e+07 50.0262 0.0421683 0.992025 0 50.5395 GTEX-13QIC-3026-SM-5LU58 1 B1 2 pieces; Purkinje cells present 6.8 Brain Brain - Cerebellum 0002037 881 423 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989766 489465 0.939502 0.99177 0.719232 23389 1 76 0.00405639 127 0 6.9768e+07 0.0600984 875852 7.0347e+07 8.47877e+06 23417 3.4704e+07 0 0.22027 0.99177 0.713313 6.9768e+07 0.00400696 1.49221e+07 1.86496e+07 1.50542e+07 148 1.50745e+07 8.59842e+06 0.00403173 1.50371e+07 49.9379 0.0124505 0.993775 0 50.2204 GTEX-13QJ3-0002-SM-5DU5T C1 Blood Whole Blood 0013756 479 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13QJ3-0002-SM-5HJRS_1 C1 Blood Whole Blood 0013756 479 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13QJ3-0002-SM-6WSD6 C1 Blood Whole Blood 0013756 479 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13QJ3-0226-SM-5S2PU 1 C1 2 pieces, spermatogenesis appears reduced 5.8 Testis Testis 0000473 477 588 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992486 112735 0.951578 0.993329 0.736604 27777 1 76 0.0019113 113 0 5.32059e+07 0.0481777 1.00742e+06 5.35632e+07 3.01898e+06 27809 2.65132e+07 0 0.214974 0.993329 0.73169 5.32059e+07 0.00256767 1.15085e+07 6.37485e+06 1.16432e+07 123 1.16219e+07 7.34508e+06 0.00223921 1.15729e+07 49.8944 0.0188081 0.994172 0 50.2909 GTEX-13QJ3-0326-SM-5S2RA 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~30 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 619 447 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.990071 175561 0.969719 0.991271 0.77561 23784 1 76 0.00175697 191 0 7.6062e+07 0.0300789 359911 7.67319e+07 3.40542e+06 23817 3.78613e+07 0 0.19411 0.991271 0.768839 7.6062e+07 0.0025111 1.65639e+07 7.15248e+06 1.67812e+07 193 1.66757e+07 1.16183e+07 0.00213358 1.67599e+07 50.1258 0.0046905 0.99247 0 50.3259 GTEX-13QJ3-0426-SM-5RQHP 0 C1 2 pieces, ~25% fibrous/fascial tissue, rep. delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 621 446 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.986349 359078 0.968371 0.987553 0.80467 22485 1 76 0.002127 153 0 6.8631e+07 0.031282 277348 6.9496e+07 3.31079e+06 22506 3.415e+07 0 0.163701 0.987553 0.794655 6.8631e+07 0.00306376 1.49042e+07 1.09593e+07 1.50467e+07 164 1.49853e+07 1.22162e+07 0.00259481 1.50597e+07 50.1238 0.00399085 0.988757 0 50.2379 GTEX-13QJ3-0526-SM-5QGQY 0 C1 2 pieces, good clean specimens; no adherent fat 6.4 Nerve Nerve - Tibial 0001323 646 422 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954,LCSET-5336 04/10/2014 TruSeq.v1 RNASEQ 0.992364 328362 0.967563 0.993423 0.764711 23697 1 76 0.00192607 173 0 7.55215e+07 0.0321371 202502 7.60215e+07 4.17584e+06 23730 3.76041e+07 0 0.202853 0.993423 0.759681 7.55215e+07 0.00275925 1.65863e+07 8.03677e+06 1.67084e+07 179 1.66419e+07 1.21493e+07 0.00234222 1.67367e+07 50.142 0.00266375 0.994482 0 50.1834 GTEX-13QJ3-0626-SM-5SI6G 0 C1 2 pieces, focal Monckberg's medial sclerosis, delineated; no significant atherosis; good clean specimens 7.6 Blood Vessel Artery - Tibial 0007610 648 420 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.99076 217677 0.972913 0.993128 0.818435 22147 1 76 0.00192392 207 0 8.40347e+07 0.0266268 327456 8.46161e+07 7.82406e+06 22169 4.18026e+07 0 0.154478 0.993128 0.812811 8.40347e+07 0.0030742 1.7971e+07 6.79178e+06 1.81306e+07 203 1.81150e+07 1.64523e+07 0.00249769 1.81793e+07 50.0885 0.0038699 0.995496 0 50.2209 GTEX-13QJ3-0726-SM-5SI68 0 C1 2 pieces, ~10-15% interstitial fat, rep. delineated 8.1 Muscle Muscle - Skeletal 0011907 661 408 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991952 232642 0.980576 0.994355 0.850905 21301 1 76 0.001706 272 0 1.00459e+08 0.0191401 881983 1.0103e+08 1.03769e+07 21318 5.00272e+07 0 0.129671 0.994355 0.846102 1.00459e+08 0.00270126 2.14284e+07 1.35457e+07 2.13716e+07 280 2.13961e+07 2.00186e+07 0.00220243 2.16144e+07 50.2538 0.00872994 0.996757 0 49.9337 GTEX-13QJ3-0826-SM-7DHKK 0 C1 2 pieces, fibroadipose tissue, no ductal elements 6.9 Breast Breast - Mammary Tissue 0008367 675 394 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989404 197633 0.9775 0.990365 0.775604 22930 1 76 0.00367588 136 0 7.1716e+07 0.022225 148372 7.24138e+07 5.78705e+06 22957 3.5651e+07 0 0.201896 0.990365 0.768131 7.1716e+07 0.00557036 1.58938e+07 6.40446e+06 1.60098e+07 150 1.6042e+07 1.26581e+07 0.0046222 1.59277e+07 49.8212 0.00204895 0.991325 0 50.1818 GTEX-13QJ3-0926-SM-73KX5 1 C1 2 pieces, no abnormalities 7.1 Thyroid Thyroid 0002046 677 393 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99282 360830 0.960555 0.994053 0.777212 24426 1 76 0.00269084 166 0 8.50762e+07 0.0391089 225863 8.55853e+07 8.27841e+06 24471 4.23762e+07 0 0.183343 0.994053 0.77259 8.50762e+07 0.00330208 1.84981e+07 1.37436e+07 1.84966e+07 182 1.85408e+07 1.5958e+07 0.00299608 1.85629e+07 50.0298 0.00263904 0.995286 0 49.9979 GTEX-13QJ3-1026-SM-5QGQU 2 C1 2 pieces, moderate congestion 6.6 Lung Lung 0008952 683 387 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992041 196125 0.971201 0.99328 0.775176 23760 1 76 0.00221932 136 0 6.515e+07 0.0282896 240284 6.55907e+07 4.30767e+06 23782 3.24126e+07 0 0.196025 0.99328 0.769967 6.515e+07 0.00326344 1.43011e+07 8.4049e+06 1.4425e+07 152 1.43667e+07 1.07872e+07 0.00274073 1.44439e+07 50.134 0.00366338 0.994519 0 50.2155 GTEX-13QJ3-1726-SM-5RQK9 1 C1 6 pieces, squmaous mucoa up to ~0.5mm, ~50% thickness. Submucosal mucus glands prominent; rep delineated 6.7 Esophagus Esophagus - Mucosa 0006920 696 378 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991785 215837 0.97068 0.992983 0.793048 22201 1 76 0.00223586 128 0 5.86666e+07 0.0291542 536261 5.90812e+07 3.05206e+06 22213 2.92104e+07 0 0.177632 0.992983 0.787483 5.86666e+07 0.00310612 1.30164e+07 7.6961e+06 1.31726e+07 147 1.31459e+07 8.81192e+06 0.00267046 1.31151e+07 49.9413 0.00907667 0.99418 0 50.2983 GTEX-13QJ3-1826-SM-5S2PT 1 C1 6 pieces, all muscularis; good specimens 5.8 Esophagus Esophagus - Muscularis 0004648 697 378 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993031 103177 0.968276 0.993889 0.786456 21786 1 76 0.00186397 121 0 5.38512e+07 0.0315486 754670 5.41823e+07 3.04551e+06 21802 2.68178e+07 0 0.18182 0.993889 0.78165 5.38512e+07 0.00268721 1.15735e+07 5.34357e+06 1.17585e+07 144 1.16796e+07 6.79018e+06 0.00227524 1.17005e+07 50.0448 0.0139283 0.994748 0 50.3963 GTEX-13QJ3-1926-SM-5QGQM 1 C1 6 pieces, all muscularis; good specimens 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 698 378 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.990818 240736 0.969499 0.992877 0.791538 22095 1 76 0.00201027 136 0 5.78138e+07 0.0303216 712074 5.82285e+07 4.27767e+06 22106 2.87429e+07 0 0.177961 0.992877 0.7859 5.78138e+07 0.00322219 1.25754e+07 5.71357e+06 1.26479e+07 155 1.25663e+07 7.22052e+06 0.00261497 1.27728e+07 50.4076 0.012229 0.994936 0 50.1437 GTEX-13QJ3-2626-SM-9OSXQ 3 C1 6 pieces, glandular portions of mucosa totally autolyzed 7 Colon Colon - Transverse 0001157 718 362 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989252 224471 0.968843 0.991446 0.78015 25289 1 76 0.00332598 203 0 9.13932e+07 0.0282726 352657 9.21817e+07 8.47908e+06 25320 4.53518e+07 0 0.188693 0.991446 0.773476 9.13932e+07 0.00463715 1.99174e+07 1.1162e+07 2.00925e+07 239 2.01707e+07 1.44526e+07 0.00398011 2.00266e+07 49.8207 0.00382567 0.99364 0 50.2188 GTEX-13QJ3-2726-SM-5SI6L 3 C1 6 pieces, mucosa is ~0.8mm, 30-40% thickness, advanced autolysis 9.3 Stomach Stomach 0000945 719 362 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.984854 227072 0.969248 0.988201 0.776846 24458 1 76 0.00211207 274 0 9.59443e+07 0.0304996 1.55847e+06 9.70899e+07 8.63984e+06 24505 4.76467e+07 0 0.192401 0.988201 0.76768 9.59443e+07 0.00341778 2.09438e+07 1.05586e+07 2.10917e+07 275 2.10494e+07 1.35418e+07 0.00276271 2.12925e+07 50.2871 0.0160519 0.991547 0 50.1759 GTEX-13QJC-0003-SM-5GYCG B1 Blood Whole Blood 0013756 1020 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13QJC-0003-SM-5HJQ8 B1 Blood Whole Blood 0013756 1020 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13QJC-0003-SM-6WSAQ B1 Blood Whole Blood 0013756 1020 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13QJC-0011-R10a-SM-5SI63 B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1010 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989693 694355 0.956434 0.992929 0.831024 23212 1 76 0.00208085 268 0 8.48873e+07 0.0433071 3.97194e+06 8.54919e+07 8.50122e+06 23229 4.22148e+07 0 0.12541 0.992929 0.825148 8.48873e+07 0.00345313 1.84231e+07 2.21331e+07 1.86725e+07 307 1.85871e+07 9.44322e+06 0.00276475 1.87633e+07 50.2358 0.0464598 0.996165 0 50.3362 GTEX-13QJC-0011-R1b-SM-5S2UU B1, A1 6.7 Brain Brain - Hippocampus 0001954 1010 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989952 559137 0.958965 0.992747 0.824267 22874 1 76 0.00219504 269 0 8.60254e+07 0.0408236 5.39366e+06 8.66539e+07 9.29056e+06 22893 4.27993e+07 0 0.134698 0.992747 0.818288 8.60254e+07 0.00345739 1.87631e+07 2.13334e+07 1.90852e+07 328 1.88577e+07 8.04091e+06 0.00282444 1.92131e+07 50.4668 0.0622437 0.995543 0 50.4256 GTEX-13QJC-0011-R2b-SM-5PNUN B1, A1 6.7 Brain Brain - Substantia nigra 0002038 1010 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991042 534713 0.955968 0.992965 0.822931 22583 1 76 0.00220111 203 0 7.45299e+07 0.0437883 5.29676e+06 7.50579e+07 6.1988e+06 22599 3.7107e+07 0 0.133037 0.992965 0.817142 7.45299e+07 0.0033275 1.6109e+07 2.16567e+07 1.65883e+07 240 1.63214e+07 7.34518e+06 0.00276321 1.65097e+07 50.2868 0.0705689 0.994888 0 50.733 GTEX-13QJC-0011-R6a-SM-5S2VI B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1010 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991426 878683 0.94958 0.993238 0.815533 23715 1 76 0.00222002 267 0 8.89684e+07 0.0502203 5.78292e+06 8.95741e+07 8.59074e+06 23730 4.43062e+07 0 0.134047 0.993238 0.810018 8.89684e+07 0.00324737 1.9187e+07 2.94484e+07 1.93311e+07 324 1.91527e+07 7.98802e+06 0.00273276 1.95307e+07 50.4886 0.0645602 0.995049 0 50.1872 GTEX-13QJC-0011-R7b-SM-5PNUM B1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 1010 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990995 580314 0.962899 0.992994 0.818483 22213 1 76 0.00231842 266 0 8.46131e+07 0.0369165 7.2378e+06 8.52101e+07 8.16893e+06 22229 4.21369e+07 0 0.144416 0.992994 0.812749 8.46131e+07 0.0033499 1.79104e+07 3.86275e+07 1.88356e+07 305 1.84978e+07 6.8552e+06 0.00283312 1.83778e+07 49.8372 0.0849406 0.994993 0 51.259 GTEX-13QJC-0011-R8b-SM-5S2U6 B1, A1 6.3 Brain Brain - Hypothalamus 0001898 1010 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992085 675316 0.956697 0.99426 0.821384 22262 1 76 0.00234583 265 0 7.95032e+07 0.0431589 7.58989e+06 7.99622e+07 7.3892e+06 22275 3.95821e+07 0 0.135312 0.99426 0.81667 7.95032e+07 0.00359747 1.7267e+07 3.46814e+07 1.73574e+07 328 1.70351e+07 5.05605e+06 0.00297028 1.77563e+07 51.0364 0.0949185 0.996435 0 50.1305 GTEX-13QJC-0011-R9b-SM-5PNX3 B1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 1010 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991793 493893 0.959874 0.992434 0.815044 23881 1 76 0.0032784 394 0 1.1186e+08 0.0398304 5.63014e+06 1.12713e+08 3.09028e+06 23908 5.57293e+07 0 0.144829 0.992434 0.808877 1.1186e+08 0.00370994 2.46513e+07 2.1041e+07 2.51685e+07 348 2.479e+07 1.30838e+07 0.00349403 2.50894e+07 50.3002 0.0499514 0.993075 0 50.5191 GTEX-13QJC-0126-SM-5ZZWJ 0 B1 6 pieces; at least 2 hair follicles in each piece; well trimmed; 5% intradermal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1037 842 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.991348 134505 0.972149 0.992639 0.782041 24357 1 76 0.00217738 185 0 7.271e+07 0.0276169 452303 7.32492e+07 6.31515e+06 24378 3.62303e+07 0 0.190108 0.992639 0.776285 7.271e+07 0.00336372 1.58794e+07 8.22593e+06 1.59751e+07 170 1.59245e+07 1.20806e+07 0.00276978 1.60234e+07 50.1548 0.00617485 0.99393 0 50.1502 GTEX-13QJC-0526-SM-5RQKB 1 B1 2 pieces; many alveolar macrophages; perivascular fibrosis 7 Lung Lung 0008952 1054 825 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990886 255963 0.969858 0.99177 0.715218 23277 1 76 0.00258342 131 0 6.54818e+07 0.0295399 306876 6.60252e+07 3.21520e+06 23317 3.256e+07 0 0.25464 0.99177 0.709332 6.54818e+07 0.00338217 1.44858e+07 5.92837e+06 1.46438e+07 148 1.4602e+07 8.5983e+06 0.00298244 1.45852e+07 49.9713 0.00464786 0.992654 0 50.2711 GTEX-13QJC-0626-SM-5S2O9 1 B1 2 pieces; no plaques; 10% external fat 6.4 Blood Vessel Artery - Coronary 0001621 1056 823 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990904 225325 0.96835 0.99226 0.72842 22629 1 76 0.0020842 124 0 6.24712e+07 0.0313325 272509 6.29584e+07 4.26296e+06 22662 3.10558e+07 0 0.23993 0.99226 0.722782 6.24712e+07 0.00289379 1.35268e+07 5.87088e+06 1.36556e+07 142 1.359e+07 9.19261e+06 0.00248844 1.36777e+07 50.1609 0.0043284 0.993616 0 50.2369 GTEX-13QJC-0726-SM-5RQJK 2 B1 2 pieces 6.7 Liver Liver 0001114 1063 816 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989497 240653 0.973328 0.99089 0.834096 20088 1 76 0.00241942 153 0 6.72709e+07 0.0265479 2.24333e+06 6.78894e+07 3.42156e+06 20104 3.3468e+07 0 0.139232 0.99089 0.826497 6.72709e+07 0.00326092 1.48378e+07 1.05295e+07 1.51882e+07 200 1.50746e+07 6.94562e+06 0.00283958 1.50407e+07 49.9437 0.0330438 0.992283 0 50.5836 GTEX-13QJC-0826-SM-5RQKC 1 B1 2 pieces; moderate degree of lymphocytic (Hashimoto) thyroiditis; second piece has more fibrosis than larger piece 6.4 Thyroid Thyroid 0002046 1063 816 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991439 189024 0.960383 0.99213 0.696074 24790 1 76 0.00244049 134 0 7.44013e+07 0.0391563 715610 7.49915e+07 3.39044e+06 24835 3.70367e+07 0 0.264309 0.99213 0.690596 7.44013e+07 0.00306581 1.62115e+07 8.18933e+06 1.6356e+07 160 1.63267e+07 9.15985e+06 0.00275293 1.62907e+07 49.9449 0.00954255 0.992822 0 50.2219 GTEX-13QJC-2326-SM-5Q5CD 1 B1 2 pieces; 1 piece has 50% salivary glands, 50% fat; other contains only fibrofatty stroma and epidermis, no glands 6.8 Salivary Gland Minor Salivary Gland 0006330 1123 756 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989611 181641 0.967332 0.991765 0.741462 23476 1 76 0.00205048 148 0 6.30425e+07 0.0322217 301642 6.3566e+07 4.7045e+06 23504 3.13628e+07 0 0.22587 0.991765 0.735356 6.30425e+07 0.00306143 1.40069e+07 9.1662e+06 1.40813e+07 147 1.40744e+07 9.00721e+06 0.00255486 1.41436e+07 50.1225 0.00474534 0.993918 0 50.1326 GTEX-13QJC-2526-SM-7DHKJ 1 B1 2 pieces; well trimmed; no plaques; thick fibrous adventitia (up to 0.3mm) 7.2 Blood Vessel Artery - Tibial 0007610 1123 756 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.987294 93650 0.971476 0.987487 0.800136 21697 1 76 0.00366621 148 0 6.94026e+07 0.0281993 472441 7.0282e+07 6.24021e+06 21719 3.4449e+07 0 0.171339 0.987487 0.790124 6.94026e+07 0.00560118 1.51021e+07 5.61149e+06 1.51367e+07 158 1.51595e+07 1.15635e+07 0.00463351 1.50917e+07 49.888 0.00672208 0.98768 0 50.0572 GTEX-13QJC-3226-SM-5ZZWI 1 B1 2 pieces 6.5 Brain Brain - Cortex 0001870 1164 715 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.993032 205465 0.955628 0.994287 0.835911 20335 1 76 0.00227352 188 0 6.20827e+07 0.0441373 4.59464e+06 6.24394e+07 5.11155e+06 20345 3.0933e+07 0 0.119717 0.994287 0.831136 6.20827e+07 0.00339183 1.36289e+07 1.17773e+07 1.39132e+07 180 1.36074e+07 7.39202e+06 0.00283197 1.40057e+07 50.7212 0.0735856 0.995543 0 50.516 GTEX-13QJC-3326-SM-664OS 1 B1 2 pieces; mostly neurohypophysis (outlined); also pars intermedia, bone and dura (outlined) 6.7 Pituitary Pituitary 0000007 1165 714 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991148 288489 0.964443 0.991904 0.769448 25054 1 76 0.00242264 270 0 9.73942e+07 0.0353589 1.50913e+06 9.81891e+07 6.38832e+06 25096 4.8451e+07 0 0.194995 0.991904 0.763218 9.73942e+07 0.00346018 2.12929e+07 9.95794e+06 2.13662e+07 313 2.12594e+07 1.20411e+07 0.00294101 2.14794e+07 50.2573 0.0153696 0.992659 0 50.0858 GTEX-13RTJ-0003-SM-5GY9V B1 Blood Whole Blood 0013756 806 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13RTJ-0003-SM-5HJQ6 B1 Blood Whole Blood 0013756 806 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13RTJ-0003-SM-6WSCV B1 Blood Whole Blood 0013756 806 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13RTJ-0011-R10b-SM-5O9CW B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 835 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985386 1.03838e+06 0.949469 0.988244 0.829184 24297 1 76 0.00360929 372 0 1.02398e+08 0.0501667 3.2311e+06 1.03616e+08 4.36594e+06 24320 5.08175e+07 0 0.120285 0.988244 0.819436 1.02398e+08 0.00471333 2.20729e+07 2.81743e+07 2.22922e+07 342 2.23785e+07 1.23917e+07 0.00415971 2.22696e+07 49.8781 0.0311834 0.991102 0 50.2471 GTEX-13RTJ-0011-R11a-SM-5O9CK B1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 835 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984675 588943 0.94166 0.987026 0.726303 24605 1 76 0.00387466 270 0 1.08214e+08 0.0579352 1.9161e+06 1.09636e+08 4.43711e+06 24646 5.37312e+07 0 0.215357 0.987026 0.71688 1.08214e+08 0.00482749 2.32299e+07 1.98513e+07 2.33575e+07 283 2.34701e+07 1.26679e+07 0.00434994 2.33502e+07 49.8719 0.0174768 0.989377 0 50.137 GTEX-13RTJ-0011-R1a-SM-5O9D9 B1, A1 7.6 Brain Brain - Hippocampus 0001954 835 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983309 716805 0.951942 0.986092 0.779942 25690 1 76 0.00370309 375 0 1.16248e+08 0.0477121 3.14768e+06 1.17887e+08 5.14034e+06 25739 5.76709e+07 0 0.171999 0.986092 0.769095 1.16248e+08 0.00487355 2.53232e+07 2.18987e+07 2.55863e+07 366 2.56575e+07 1.4822e+07 0.00428667 2.55622e+07 49.9069 0.0267008 0.988875 0 50.2584 GTEX-13RTJ-0011-R2a-SM-5PNW9 B1, A1 7 Brain Brain - Substantia nigra 0002038 835 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993817 459984 0.960704 0.995163 0.827875 23197 1 76 0.00199877 201 0 7.00036e+07 0.038993 4.03076e+06 7.03438e+07 5.49742e+06 23212 3.48836e+07 0 0.132828 0.995163 0.823871 7.00036e+07 0.002803 1.53742e+07 1.70169e+07 1.55013e+07 236 1.54301e+07 7.96256e+06 0.00240034 1.55373e+07 50.1731 0.0573008 0.996509 0 50.2058 GTEX-13RTJ-0011-R3a-SM-5PNX7 B1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 835 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992582 659293 0.952171 0.993219 0.816424 24123 1 76 0.00311758 269 0 8.58992e+07 0.0474211 4.48806e+06 8.64857e+07 2.31732e+06 24142 4.27787e+07 0 0.135748 0.993219 0.810887 8.58992e+07 0.00352872 1.85789e+07 2.51881e+07 1.89131e+07 275 1.88161e+07 9.85203e+06 0.00332302 1.87364e+07 49.8939 0.0518937 0.993856 0 50.4457 GTEX-13RTJ-0011-R4b-SM-5PNX1 B1, A1 7.2 Brain Brain - Amygdala 0001876 835 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992155 746801 0.957358 0.992958 0.814119 25140 1 76 0.00314604 373 0 1.13362e+08 0.0422672 7.42038e+06 1.14166e+08 3.32622e+06 25169 5.64699e+07 0 0.143238 0.992958 0.808386 1.13362e+08 0.00352911 2.44821e+07 3.27911e+07 2.5116e+07 337 2.48884e+07 1.2556e+07 0.00333742 2.47916e+07 49.9026 0.0649964 0.99376 0 50.639 GTEX-13RTJ-0011-R5a-SM-5P9HR B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 835 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992654 977515 0.948724 0.993062 0.813449 25120 1 76 0.00321387 271 0 1.15961e+08 0.0509904 5.45753e+06 1.16771e+08 3.74019e+06 25145 5.77895e+07 0 0.135274 0.993062 0.807806 1.15961e+08 0.00345181 2.49419e+07 3.6639e+07 2.52884e+07 318 2.50507e+07 1.29838e+07 0.00333279 2.52389e+07 50.1871 0.0467371 0.99347 0 50.3449 GTEX-13RTJ-0011-R6a-SM-5SI74 B1, A1 8.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 835 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991359 641697 0.944058 0.993795 0.790673 23779 1 76 0.00207016 152 0 6.53006e+07 0.0554954 2.42752e+06 6.57083e+07 6.14264e+06 23801 3.24905e+07 0 0.153385 0.993795 0.785767 6.53006e+07 0.00323445 1.40638e+07 1.82086e+07 1.40846e+07 173 1.40903e+07 8.15175e+06 0.00265088 1.42215e+07 50.2316 0.0369439 0.996231 0 50.037 GTEX-13RTJ-0011-R7b-SM-5P9JS B1, A1 9.1 Brain Brain - Putamen (basal ganglia) 0001874 835 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992276 1.13314e+06 0.940107 0.992798 0.785023 24851 1 76 0.00323933 269 0 9.38786e+07 0.05949 3.00406e+06 9.45596e+07 3.02696e+06 24879 4.67589e+07 0 0.155085 0.992798 0.779369 9.38786e+07 0.00350623 2.01203e+07 3.26776e+07 2.02256e+07 281 2.0174e+07 1.15885e+07 0.00337271 2.02384e+07 50.0797 0.031769 0.993321 0 50.1305 GTEX-13RTJ-0011-R8b-SM-5O9DL B1, A1 7.6 Brain Brain - Hypothalamus 0001898 835 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985474 886574 0.952103 0.988051 0.816169 25231 1 76 0.00365529 270 0 9.46566e+07 0.0475603 3.94135e+06 9.58013e+07 4.03971e+06 25261 4.69814e+07 0 0.135934 0.988051 0.806417 9.46566e+07 0.00469384 2.05572e+07 2.32396e+07 2.07703e+07 308 2.08464e+07 1.13391e+07 0.00417321 2.07188e+07 49.8464 0.0411408 0.990628 0 50.2579 GTEX-13RTJ-0011-R9a-SM-5Q5AY B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 835 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99106 503828 0.957158 0.993834 0.806632 22695 1 76 0.00181008 178 0 6.90727e+07 0.0424012 1.43569e+06 6.95013e+07 5.10011e+06 22715 3.43452e+07 0 0.150525 0.993834 0.801659 6.90727e+07 0.00288098 1.52856e+07 1.23156e+07 1.5382e+07 178 1.53233e+07 1.0921e+07 0.00234404 1.55416e+07 50.3537 0.0206571 0.996607 0 50.1572 GTEX-13RTJ-0126-SM-5S2NN 0 B1 6 pieces, minimal fat, sqamous epithelium is atrohpic, ~20-30 microns 4.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 854 1101 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99112 224641 0.973202 0.9927 0.773089 22008 1 76 0.00193221 137 0 6.15133e+07 0.0265925 435275 6.19657e+07 4.55605e+06 22036 3.05995e+07 0 0.200113 0.9927 0.767445 6.15133e+07 0.0028495 1.35464e+07 8.57696e+06 1.37307e+07 147 1.36678e+07 1.01795e+07 0.00239012 1.37146e+07 50.0854 0.00702445 0.994279 0 50.3378 GTEX-13RTJ-0326-SM-5YYAE 1 B1 2 pieces, microfollicular adenomatoid nodule, ~2mm, delineated 7 Thyroid Thyroid 0002046 872 1083 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991107 367013 0.965423 0.992326 0.768938 24814 1 76 0.00261418 277 0 1.15867e+08 0.034249 238165 1.16763e+08 5.41044e+06 24859 5.76752e+07 0 0.196485 0.992326 0.763037 1.15867e+08 0.00311814 2.53661e+07 1.45763e+07 2.54831e+07 308 2.54754e+07 2.18046e+07 0.00286585 2.55172e+07 50.0409 0.00203974 0.993546 0 50.115 GTEX-13RTJ-0526-SM-62LDP 1 B1 2 pieces, mulitple acute inflammatory aggregates/miscroabscesses, rep. delineated 5.7 Heart Heart - Atrial Appendage 0006631 878 1077 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989943 203369 0.981046 0.993197 0.832388 20869 1 76 0.00271886 264 0 8.96283e+07 0.0188232 3.00926e+06 9.02422e+07 6.16087e+06 20884 4.45903e+07 0 0.148658 0.993197 0.826725 8.96283e+07 0.00327248 1.94401e+07 2.36064e+07 1.93634e+07 298 1.93919e+07 9.09914e+06 0.00299476 1.96452e+07 50.3244 0.0333464 0.996452 0 49.9012 GTEX-13RTJ-0626-SM-5S2NB 1 B1 2 pieces, subtotally occlusive, calcified atherosis; adherent fat up to ~1mm 3.2 Blood Vessel Artery - Coronary 0001621 885 1070 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990077 567661 0.948211 0.991612 0.792647 21770 1 76 0.00192504 170 0 8.03257e+07 0.0514828 644809 8.10052e+07 5.86311e+06 21788 3.99491e+07 0 0.155564 0.991612 0.785998 8.03257e+07 0.00293347 1.67564e+07 3.22086e+07 1.7088e+07 194 1.69617e+07 1.3891e+07 0.00242847 1.70195e+07 50.085 0.00796009 0.993147 0 50.4899 GTEX-13RTJ-0726-SM-5QGQN 1 B1 2 pieces, moderate interstitieal fibrosis, microinfarct (remote) delineated 6.7 Heart Heart - Left Ventricle 0006566 886 1069 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991866 241950 0.978129 0.993483 0.836751 19254 1 76 0.00198669 193 0 6.45968e+07 0.0217753 2.62782e+06 6.50206e+07 4.36987e+06 19264 3.21887e+07 0 0.141379 0.993483 0.831297 6.45968e+07 0.00289812 1.40885e+07 2.45675e+07 1.43094e+07 207 1.42555e+07 6.39403e+06 0.00244166 1.42364e+07 49.9663 0.0404152 0.9951 0 50.3889 GTEX-13RTJ-1126-SM-5S2UJ 2 B1 2 pieces diffuse fibrosing and acute pneumonitis, severe, focally necrotizing 5.8 Lung Lung 0008952 894 1061 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.99128 241727 0.972894 0.99319 0.793658 22475 1 76 0.00222156 127 0 5.89553e+07 0.0266704 187523 5.93595e+07 5.64402e+06 22495 2.93289e+07 0 0.179236 0.99319 0.788253 5.89553e+07 0.00344843 1.29318e+07 8.50196e+06 1.30573e+07 141 1.3009e+07 1.03244e+07 0.00283381 1.30982e+07 50.1708 0.0031591 0.9951 0 50.2413 GTEX-13RTJ-1426-SM-793B3 1 B1 6 pieces muscularis, good specimens 5.9 Esophagus Esophagus - Muscularis 0004648 902 1053 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.989199 313946 0.968545 0.989417 0.850705 21134 1 76 0.00201059 163 0 6.8118e+07 0.0311951 1.67097e+06 6.88466e+07 4.14609e+06 21152 3.38915e+07 0 0.117839 0.989417 0.841702 6.8118e+07 0.00240037 1.48584e+07 1.23261e+07 1.50269e+07 194 1.50764e+07 1.03493e+07 0.00220544 1.48291e+07 49.5866 0.0242708 0.989634 0 50.282 GTEX-13RTJ-1926-SM-5YYA2 1 B1 6 pieces, muscularis, few foci of autolyzed mucosa, rep. delineated 7.4 Colon Colon - Sigmoid 0001159 913 1042 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990052 835358 0.953505 0.991193 0.789141 23660 1 76 0.00267726 280 0 1.05175e+08 0.0462034 709346 1.06109e+08 4.61968e+06 23683 5.23383e+07 0 0.164364 0.991193 0.782191 1.05175e+08 0.00330488 2.21693e+07 3.13438e+07 2.24901e+07 276 2.24186e+07 1.85134e+07 0.00299071 2.2386e+07 49.9636 0.00668505 0.992335 0 50.3592 GTEX-13RTJ-2126-SM-5S2PZ 1 B1 2 pieces, glandular epithelium modetately well preserved 6.3 Prostate Prostate 0002367 917 1038 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990429 334975 0.964031 0.991601 0.801689 22705 1 76 0.00178613 154 0 7.01457e+07 0.0357311 784643 7.07399e+07 4.12563e+06 22728 3.49038e+07 0 0.162342 0.991601 0.794956 7.01457e+07 0.00262364 1.49156e+07 1.07876e+07 1.51728e+07 173 1.50383e+07 1.1579e+07 0.00220439 1.51445e+07 50.1759 0.0110919 0.992772 0 50.4273 GTEX-13RTJ-2226-SM-5S2Q1 3 B1 6 pieces, glomeruli present, all sections, tubules moderately-markedly autolyzed 5.9 Kidney Kidney - Cortex 0001225 922 1033 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990491 704973 0.924979 0.991774 0.784838 22230 1 76 0.00190027 139 0 5.98731e+07 0.0747466 2.9923e+06 6.03697e+07 3.48619e+06 22243 2.97972e+07 0 0.140141 0.991774 0.778382 5.98731e+07 0.00296448 1.25177e+07 3.99464e+07 1.29092e+07 156 1.28263e+07 8.06156e+06 0.00243169 1.2704e+07 49.7606 0.0495662 0.993056 0 50.7698 GTEX-13RTJ-2426-SM-5S2Q2 1 B1 6 pieces, minimal dermal fat; squamous epithelium unusually atrophic, ~15-20 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 930 1025 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993437 140220 0.970477 0.994218 0.780544 22424 1 76 0.00179472 134 0 5.81879e+07 0.0293429 283542 5.85263e+07 3.19682e+06 22446 2.89828e+07 0 0.189933 0.994218 0.77603 5.81879e+07 0.0025753 1.27956e+07 6.37848e+06 1.29561e+07 146 1.28596e+07 9.07778e+06 0.0021847 1.29419e+07 50.1595 0.00484469 0.994999 0 50.3116 GTEX-13RTJ-2526-SM-5S2Q3 1 B1 2 pieces, ~10% prominent vessel/fascia, delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 931 1024 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991569 198758 0.967098 0.992296 0.826089 21710 1 76 0.00176043 145 0 6.08407e+07 0.0326209 576031 6.13131e+07 3.26625e+06 21723 3.03067e+07 0 0.141009 0.992296 0.819725 6.08407e+07 0.00243674 1.32013e+07 1.21843e+07 1.33183e+07 152 1.32222e+07 1.13965e+07 0.00209834 1.33482e+07 50.2372 0.00939492 0.993023 0 50.2206 GTEX-13RTJ-2626-SM-7DHKR 0 B1 2 pieces, ~10% occlusive atherosis; Monckeberg medial sclerosis, encircled; adherent rims of fibrous tissue up to ~1mm, delineated 6.2 Blood Vessel Artery - Tibial 0007610 932 1023 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.984876 119566 0.973545 0.984586 0.83202 22141 1 76 0.0036615 164 0 7.80265e+07 0.0261288 275642 7.9248e+07 7.93824e+06 22162 3.87021e+07 0 0.141524 0.984586 0.819195 7.80265e+07 0.00568973 1.68431e+07 8.34555e+06 1.69009e+07 178 1.69052e+07 1.48783e+07 0.00467592 1.68244e+07 49.8803 0.00347822 0.984295 0 50.0857 GTEX-13RTJ-2726-SM-73KVG 1 B1 2 pieces, ~50% interstitial fat/edema, evidence of atrophy 8.2 Muscle Muscle - Skeletal 0011907 933 1022 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992494 364630 0.976117 0.993678 0.828195 21202 1 76 0.00382249 154 0 7.51845e+07 0.0236323 706419 7.56628e+07 3.22632e+06 21220 3.74412e+07 0 0.147921 0.993678 0.822959 7.51845e+07 0.0039547 1.60692e+07 9.66467e+06 1.64514e+07 163 1.64446e+07 1.45745e+07 0.00388851 1.61545e+07 49.5551 0.00933641 0.994861 0 50.5876 GTEX-13RTJ-2826-SM-5QGQH 0 B1 4 pieces, clean specimens 6.1 Nerve Nerve - Tibial 0001323 934 1021 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99188 205858 0.96327 0.993234 0.759202 23492 1 76 0.00194393 155 0 6.7961e+07 0.0364785 349416 6.84239e+07 4.92579e+06 23523 3.38214e+07 0 0.204069 0.993234 0.754065 6.7961e+07 0.00287834 1.47857e+07 7.9786e+06 1.49408e+07 162 1.48543e+07 1.03888e+07 0.00241049 1.49695e+07 50.193 0.00510663 0.994588 0 50.2609 GTEX-13RTJ-2926-SM-5Q5DE 1 B1 1 piece, mainly adenohypophysis, 4x3mm portion of neurohypophysis, delineated 7 Pituitary Pituitary 0000007 982 973 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988028 375985 0.954851 0.990572 0.759776 25244 1 76 0.00219016 157 0 7.85793e+07 0.0448842 244075 7.93273e+07 1.16112e+07 25278 3.90825e+07 0 0.195075 0.990572 0.752613 7.85793e+07 0.00374803 1.69118e+07 1.61862e+07 1.70685e+07 172 1.70688e+07 1.28946e+07 0.0029671 1.711e+07 50.0601 0.00307681 0.993116 0 50.2306 GTEX-13RTJ-3126-SM-5S2Q4 1 B1 2 pieces, no abnormalities 6.6 Brain Brain - Cerebellum 0002037 987 968 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990882 475492 0.924374 0.991851 0.692906 22589 1 76 0.00210371 108 0 5.66539e+07 0.0753387 1.12979e+06 5.71194e+07 3.45301e+06 22609 2.82195e+07 0 0.231468 0.991851 0.687259 5.66539e+07 0.00270133 1.18621e+07 2.3778e+07 1.22047e+07 128 1.21716e+07 5.93251e+06 0.00240222 1.19507e+07 49.5422 0.0197794 0.992819 0 50.7117 GTEX-13RTK-0003-SM-5DU57 B1 Blood Whole Blood 0013756 1179 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13RTK-0003-SM-5HJRF B1 Blood Whole Blood 0013756 1179 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13RTK-0003-SM-6WSCZ B1 Blood Whole Blood 0013756 1179 BP-45056 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13RTK-0126-SM-5RQHQ 1 B1 6 pieces, adherent fat/serosa up to ~3mm, rep delineated 7.8 Blood Vessel Artery - Aorta 0001496 1644 1306 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992114 256061 0.978121 0.993567 0.849438 21992 1 76 0.0019701 170 0 7.63208e+07 0.0214945 351462 7.6815e+07 3.99162e+06 22006 3.79903e+07 0 0.128683 0.993567 0.843974 7.63208e+07 0.0027807 1.66452e+07 5.4515e+06 1.68286e+07 185 1.6804e+07 1.55983e+07 0.00237481 1.67812e+07 49.966 0.00457544 0.99502 0 50.2739 GTEX-13RTK-0226-SM-5RQHR 1 B1 6 pieces, mucosa up to~1mm thick, ~10% thickness well preserved, diffuse chronic active gastritis (microabscesses noted), rep encircled 6.7 Stomach Stomach 0000945 1654 1296 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991608 197681 0.973375 0.992702 0.796742 23484 1 76 0.00213755 181 0 6.81712e+07 0.0262711 504010 6.86724e+07 3.13233e+06 23510 3.39485e+07 0 0.176634 0.992702 0.790927 6.81712e+07 0.00289908 1.51667e+07 1.507e+07 1.53458e+07 170 1.53177e+07 1.17042e+07 0.0025179 1.52697e+07 49.9216 0.00733934 0.993795 0 50.2934 GTEX-13RTK-0326-SM-5RQHS 1 B1 2 pieces adherent fat up to ~2.5mm, rep delineated 6.5 Thyroid Thyroid 0002046 1655 1295 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991731 162255 0.966985 0.992641 0.745583 23057 1 76 0.00209363 139 0 6.98701e+07 0.032769 228779 7.03881e+07 3.65612e+06 23091 3.47985e+07 0 0.221402 0.992641 0.740096 6.98701e+07 0.0028282 1.52513e+07 6.67559e+06 1.5444e+07 157 1.54037e+07 1.03833e+07 0.00246058 1.53513e+07 49.9148 0.00325025 0.993551 0 50.3138 GTEX-13RTK-0426-SM-5RQHT 1 B1 6 pieces, all muscularis, adherent fat /serosa up to ~2.5mm, rep delineated 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 1659 1291 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993745 151425 0.977564 0.994463 0.841316 21886 1 76 0.00184552 279 0 8.57563e+07 0.0221057 946267 8.62338e+07 4.03424e+06 21906 4.27428e+07 0 0.136248 0.994463 0.836657 8.57563e+07 0.00244984 1.86655e+07 7.58862e+06 1.87985e+07 264 1.87211e+07 1.55762e+07 0.00214747 1.88042e+07 50.1107 0.0109733 0.995181 0 50.1776 GTEX-13RTK-0526-SM-5S2QF 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~5-10% thickness 9.7 Esophagus Esophagus - Mucosa 0006920 1669 1281 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993732 147691 0.974655 0.994518 0.825223 20637 1 76 0.00176898 124 0 5.71055e+07 0.0249674 295086 5.74203e+07 3.28685e+06 20650 2.84664e+07 0 0.149432 0.994518 0.820699 5.71055e+07 0.00245282 1.28599e+07 7.9666e+06 1.29809e+07 134 1.29582e+07 1.14536e+07 0.00211063 1.29289e+07 49.9434 0.00513906 0.995305 0 50.2342 GTEX-13RTK-0626-SM-5Q5EK 1 B1 6 pieces, all muscularis, good specimens 8.1 Esophagus Esophagus - Muscularis 0004648 1670 1280 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990563 188305 0.976562 0.993348 0.841872 22267 1 76 0.00195768 277 0 8.97231e+07 0.0231585 1.16196e+06 9.03239e+07 1.2413e+07 22285 4.46414e+07 0 0.13469 0.993348 0.836272 8.97231e+07 0.00337183 1.94896e+07 8.88644e+06 1.96265e+07 287 1.95902e+07 1.52523e+07 0.00266277 1.97566e+07 50.2114 0.0128643 0.996133 0 50.175 GTEX-13RTK-0726-SM-5Q5EN 1 B1 2 pieces, minimal fasica 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1672 1278 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990802 174064 0.976889 0.993555 0.847308 22355 1 76 0.00194756 281 0 8.29416e+07 0.0228523 775872 8.34797e+07 1.16067e+07 22367 4.12717e+07 0 0.129581 0.993555 0.841848 8.29416e+07 0.0031948 1.81947e+07 8.35938e+06 1.83102e+07 259 1.82908e+07 1.54821e+07 0.00256945 1.84329e+07 50.1935 0.00929415 0.996308 0 50.1582 GTEX-13RTK-0826-SM-5Q5C6 2 B1 6 pieces, ~10% lymphoid aggregates, rep delineated 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 1682 1268 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989948 198045 0.972721 0.992344 0.811762 22890 1 76 0.00206471 121 0 5.43436e+07 0.0263168 308260 5.47628e+07 3.98512e+06 22910 2.70092e+07 0 0.160959 0.992344 0.805548 5.43436e+07 0.00307458 1.20854e+07 5.78183e+06 1.20813e+07 132 1.20739e+07 9.29656e+06 0.00256843 1.2219e+07 50.2986 0.005629 0.994741 0 49.9916 GTEX-13RTK-1426-SM-5QGQJ 0 B1 6 pieces, squamous epithelium is ~50 microns, minimal dermal fat, rep focus delineated 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1729 1221 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.991763 224227 0.972856 0.993627 0.813048 23059 1 76 0.0017584 185 0 7.55114e+07 0.0269151 616699 7.59957e+07 4.04895e+06 23078 3.75909e+07 0 0.159807 0.993627 0.807867 7.55114e+07 0.00279613 1.65782e+07 8.37182e+06 1.66748e+07 194 1.66128e+07 1.29764e+07 0.00227629 1.6781e+07 50.2519 0.00811492 0.995492 0 50.1453 GTEX-13RTK-1626-SM-5QGQS 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.5 Muscle Muscle - Skeletal 0011907 1738 1212 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993644 182050 0.983232 0.995048 0.864833 19428 1 76 0.00156499 277 0 8.28546e+07 0.0165779 1.46985e+06 8.32669e+07 5.57168e+06 19438 4.13018e+07 0 0.118398 0.995048 0.860551 8.28546e+07 0.00241097 1.79963e+07 1.60991e+07 1.81916e+07 271 1.80309e+07 1.53688e+07 0.00198738 1.82599e+07 50.3155 0.0176523 0.996452 0 50.2699 GTEX-13RTK-1826-SM-5S2P3 0 B1 2 pieces, clean specimens, , no atherosis 7.8 Blood Vessel Artery - Tibial 0007610 1739 1211 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993712 173008 0.973951 0.994814 0.847724 19570 1 76 0.00160184 132 0 5.75707e+07 0.0256344 382854 5.78708e+07 3.8817e+06 19582 2.866e+07 0 0.126226 0.994814 0.843328 5.75707e+07 0.00233906 1.23082e+07 4.05675e+06 1.23927e+07 143 1.23083e+07 1.14602e+07 0.00197004 1.24575e+07 50.3012 0.00661567 0.995916 0 50.171 GTEX-13RTL-0011-R1a-SM-5PNZ8 B1, A1 6 Brain Brain - Hippocampus 0001954 1290 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991256 1.268e+06 0.945595 0.992121 0.807466 23126 1 76 0.00295498 375 0 1.15046e+08 0.0541766 1.32426e+07 1.1596e+08 3.33296e+06 23151 5.73223e+07 0 0.138129 0.992121 0.801104 1.15046e+08 0.00329508 2.45619e+07 6.18193e+07 2.53272e+07 338 2.50291e+07 8.34172e+06 0.00312488 2.49539e+07 49.9247 0.1142 0.992987 0 50.767 GTEX-13RTL-0011-R3a-SM-5P9JP B1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1290 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991771 704836 0.964825 0.992507 0.829804 21591 1 76 0.00286413 372 0 1.00816e+08 0.0350452 1.18285e+07 1.01577e+08 3.29548e+06 21601 5.0228e+07 0 0.13502 0.992507 0.823586 1.00816e+08 0.00321908 2.14859e+07 5.13629e+07 2.23932e+07 353 2.17544e+07 5.4899e+06 0.00304148 2.21876e+07 50.4928 0.116448 0.993242 0 51.0339 GTEX-13RTL-0011-R9a-SM-5Q5BR B1, A1 5.7 Brain Brain - Spinal cord (cervical c-1) 0006469 1290 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.980031 258301 0.960675 0.983751 0.848966 18046 1 76 0.00183534 179 0 5.43339e+07 0.039187 6.39569e+06 5.52313e+07 3.96267e+06 18050 2.69959e+07 0 0.111709 0.983751 0.835171 5.43339e+07 0.00308772 1.20459e+07 1.64835e+07 1.20849e+07 191 1.18384e+07 3.49944e+06 0.00245916 1.24609e+07 51.2811 0.115798 0.987471 0 50.0808 GTEX-13RTL-0126-SM-7LG5S 1 B1 6 pieces; includes up to 20% attached and internal fat, epidermis measures 23 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1310 1034 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983492 414537 0.968397 0.988424 0.766456 25565 1 76 0.0035929 219 0 8.93338e+07 0.0313649 414739 9.038e+07 1.3049e+07 25598 4.42765e+07 0 0.201941 0.988424 0.757584 8.93338e+07 0.00515734 1.93156e+07 1.08282e+07 1.95582e+07 212 1.97817e+07 1.51939e+07 0.00437122 1.9503e+07 49.6454 0.00458884 0.993357 0 50.3121 GTEX-13RTL-0326-SM-7LT89 1 B1 2 pieces; includes 10 and 50% attached and internal fat, some atrophic fibers, medial calcification of vessels 7.8 Muscle Muscle - Skeletal 0011907 1318 1026 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990954 197121 0.979388 0.993642 0.85338 22299 1 76 0.00236069 276 0 1.12935e+08 0.0203973 1.33188e+06 1.13658e+08 1.19637e+07 22322 5.62064e+07 0 0.126008 0.993642 0.847954 1.12935e+08 0.00335716 2.45327e+07 1.34473e+07 2.4734e+07 285 2.47941e+07 2.24027e+07 0.00285758 2.47353e+07 49.9406 0.0117183 0.99633 0 50.2043 GTEX-13RTL-0426-SM-7LG66 1 B1 2 pieces; one is fragmented due to calcification, atherosclerosis with narrowing of the lumen by >50% 5.7 Blood Vessel Artery - Tibial 0007610 1325 1019 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.9732 784857 0.973351 0.981699 0.811692 23623 1 76 0.00344967 277 0 9.85859e+07 0.0263142 631045 1.00424e+08 1.51865e+07 23655 4.86173e+07 0 0.161659 0.981699 0.796837 9.85859e+07 0.00610205 2.11664e+07 1.14513e+07 2.13072e+07 256 2.18801e+07 1.77603e+07 0.00476438 2.13714e+07 49.4118 0.00628382 0.990198 0 50.1657 GTEX-13RTL-0826-SM-DO3WZ 1 B1 1 piece; not cerebellum, pituitary, adenohypophysis and neurohypophysis, portion of dura Pituitary Pituitary 0000007 1404 940 BP-51086 DNA Extraction from Paxgene-derived Lysate Plate Based 04/03/2014 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-13RTL-0826-SM-DOKJO 1 B1 1 piece; not cerebellum, pituitary, adenohypophysis and neurohypophysis, portion of dura Pituitary Pituitary 0000007 1404 940 BP-51086 DNA Extraction from Paxgene-derived Lysate Plate Based 04/03/2014 LCSET-10574 02/14/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-13S7M-0003-SM-5DU58 C1 Blood Whole Blood 0013756 502 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13S7M-0003-SM-5HJRR C1 Blood Whole Blood 0013756 502 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13S7M-0003-SM-6WSAH C1 Blood Whole Blood 0013756 502 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13S7M-0005-SM-5NQ76 C1 8.7 Blood Whole Blood 0013756 502 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.989062 1.09098e+06 0.953893 0.990666 0.715825 19361 1 76 0.00254149 109 0 7.80316e+07 0.0449493 123477 7.87667e+07 5.93614e+06 19378 3.88259e+07 0 0.238068 0.990666 0.709144 7.80316e+07 0.00338391 1.74405e+07 7.27132e+07 1.76216e+07 133 1.76149e+07 1.57837e+07 0.00296202 1.75939e+07 49.9703 0.00156763 0.99227 0 50.2583 GTEX-13S7M-0011-R10b-SM-5PNZB C1, A1 7.6 Brain Brain - Frontal Cortex (BA9) 0009834 505 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993314 818641 0.95573 0.993866 0.840081 24243 1 76 0.00286095 271 0 1.07024e+08 0.0438038 3.42087e+06 1.07685e+08 3.06699e+06 24264 5.33203e+07 0 0.115649 0.993866 0.834928 1.07024e+08 0.00320307 2.324e+07 2.50167e+07 2.34708e+07 330 2.33158e+07 1.37177e+07 0.00303192 2.34515e+07 50.1451 0.0317675 0.994417 0 50.247 GTEX-13S7M-0011-R11b-SM-5P9HU C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 505 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990997 574645 0.941291 0.991536 0.730518 24399 1 76 0.00331292 270 0 1.05266e+08 0.0582821 1.41582e+06 1.06165e+08 3.59145e+06 24444 5.24123e+07 0 0.210773 0.991536 0.724335 1.05266e+08 0.00355341 2.26065e+07 2.17643e+07 2.2703e+07 272 2.26506e+07 1.27825e+07 0.0034331 2.27169e+07 50.0731 0.0133361 0.992074 0 50.1065 GTEX-13S7M-0011-R1b-SM-5PNZE C1, A1 6.3 Brain Brain - Hippocampus 0001954 505 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991919 743191 0.958049 0.992939 0.832058 23907 1 76 0.00286102 374 0 1.08597e+08 0.0416758 6.31775e+06 1.09369e+08 3.08259e+06 23927 5.4095e+07 0 0.125991 0.992939 0.826183 1.08597e+08 0.00327745 2.34586e+07 3.27785e+07 2.4189e+07 344 2.39187e+07 1.07533e+07 0.00306902 2.38195e+07 49.8962 0.0577653 0.99396 0 50.7665 GTEX-13S7M-0011-R3a-SM-5PNX2 C1, A1 7.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 505 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992378 981476 0.951799 0.993099 0.819272 24806 1 76 0.00285368 371 0 1.23186e+08 0.0478917 7.5766e+06 1.24042e+08 3.3445e+06 24835 6.1379e+07 0 0.132527 0.993099 0.813619 1.23186e+08 0.00326127 2.64927e+07 4.35945e+07 2.69863e+07 356 2.67514e+07 1.1701e+07 0.00305733 2.68261e+07 50.0697 0.0610809 0.99382 0 50.4615 GTEX-13S7M-0011-R5b-SM-5P9HS C1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 505 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992239 625866 0.957055 0.99269 0.796695 25404 1 76 0.00299593 270 0 1.21813e+08 0.0426608 7.08769e+06 1.2271e+08 3.89434e+06 25433 6.07015e+07 0 0.16036 0.99269 0.790871 1.21813e+08 0.00320483 2.61552e+07 4.34337e+07 2.64148e+07 327 2.62154e+07 1.15633e+07 0.00310033 2.64221e+07 50.1963 0.0577595 0.993142 0 50.2469 GTEX-13S7M-0011-R6b-SM-5O9D8 C1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 505 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986072 578534 0.958799 0.988738 0.813925 24504 1 76 0.0033382 370 0 1.16637e+08 0.0410224 9.21337e+06 1.17966e+08 4.76884e+06 24522 5.79658e+07 0 0.144874 0.988738 0.804759 1.16637e+08 0.00431712 2.49513e+07 3.66624e+07 2.56887e+07 354 2.53922e+07 8.49537e+06 0.00382634 2.54847e+07 50.091 0.0781021 0.991403 0 50.728 GTEX-13S7M-0011-R7a-SM-5O9DK C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 505 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.987321 702499 0.956826 0.989798 0.815516 24007 1 76 0.00334123 370 0 1.10635e+08 0.0430139 8.4608e+06 1.11776e+08 4.50818e+06 24026 5.49876e+07 0 0.14131 0.989798 0.807197 1.10635e+08 0.0043493 2.37693e+07 4.05663e+07 2.41661e+07 367 2.39818e+07 7.78991e+06 0.003844 2.41824e+07 50.2082 0.0756945 0.992276 0 50.4139 GTEX-13S7M-0011-R9a-SM-5O9DW C1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 505 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986835 535378 0.962691 0.989503 0.820252 23610 1 76 0.00336303 378 0 1.02739e+08 0.0370309 4.98243e+06 1.03829e+08 4.24826e+06 23634 5.10448e+07 0 0.142439 0.989503 0.811642 1.02739e+08 0.0044196 2.25723e+07 2.20359e+07 2.29918e+07 366 2.286e+07 1.0683e+07 0.00388989 2.29374e+07 50.0845 0.0479868 0.992171 0 50.4603 GTEX-13S7M-0126-SM-5SI6A 1 C1 6 pieces; well trimmed; 5% intradermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 575 956 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988665 227754 0.971649 0.991121 0.787751 24285 1 76 0.00198102 289 0 9.74111e+07 0.0281242 382652 9.82837e+07 8.58166e+06 24316 4.84813e+07 0 0.183899 0.991121 0.780756 9.74111e+07 0.00315785 2.12845e+07 1.05321e+07 2.14213e+07 289 2.14098e+07 1.64699e+07 0.00256798 2.15275e+07 50.137 0.00389334 0.993578 0 50.1602 GTEX-13S7M-0226-SM-5S2UG 1 C1 2 pieces 6 Adipose Tissue Adipose - Subcutaneous 0002190 579 952 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.98874 295969 0.973241 0.991977 0.778205 24307 1 76 0.00202839 277 0 1.00715e+08 0.0263851 562828 1.01529e+08 1.04289e+07 24341 5.00578e+07 0 0.195036 0.991977 0.771961 1.00715e+08 0.00349116 2.21085e+07 1.05305e+07 2.22846e+07 285 2.2292e+07 1.60678e+07 0.00275739 2.24138e+07 50.1362 0.00554351 0.995214 0 50.1983 GTEX-13S7M-0326-SM-5S2PH 1 C1 2 pieces; moderate atrophy; 20 & 10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 581 951 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99419 96384 0.976654 0.99517 0.810401 20105 1 76 0.0014995 105 0 5.24571e+07 0.0230974 446269 5.27117e+07 2.81249e+06 20116 2.61472e+07 0 0.166253 0.99517 0.806487 5.24571e+07 0.00223823 1.12766e+07 4.70445e+06 1.1441e+07 118 1.13807e+07 1.06332e+07 0.0018685 1.13825e+07 50.004 0.00846623 0.99615 0 50.3618 GTEX-13S7M-0426-SM-5S2US 0 C1 2 pieces plus fragments; 10% external fat 6.5 Nerve Nerve - Tibial 0001323 583 953 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988941 231789 0.963735 0.991508 0.717062 24506 1 76 0.00208996 183 0 8.23108e+07 0.0359762 262252 8.30158e+07 8.78188e+06 24548 4.09428e+07 0 0.246673 0.991508 0.710972 8.23108e+07 0.00318119 1.80075e+07 8.03333e+06 1.81928e+07 189 1.81902e+07 1.15358e+07 0.00263416 1.82149e+07 50.0339 0.00315906 0.994075 0 50.256 GTEX-13S7M-0826-SM-5QGQX 0 C1 2 pieces 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 590 948 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991191 178468 0.97106 0.992858 0.76156 22893 1 76 0.00201915 127 0 5.55113e+07 0.028615 187965 5.59106e+07 3.97173e+06 22914 2.7626e+07 0 0.2095 0.992858 0.756121 5.55113e+07 0.00308944 1.2181e+07 6.56167e+06 1.22808e+07 134 1.22469e+07 8.66579e+06 0.0025534 1.23127e+07 50.1338 0.00336189 0.994526 0 50.2039 GTEX-13S7M-1726-SM-5RQK3 1 C1 2 pieces; myometrium only in these cuts 5.9 Uterus Uterus 0000995 614 930 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.985048 155536 0.959757 0.985872 0.703262 22756 1 76 0.00248305 130 0 6.45851e+07 0.039999 162757 6.55107e+07 3.51635e+06 22806 3.20761e+07 0 0.256495 0.985872 0.693327 6.45851e+07 0.00335919 1.40287e+07 6.8262e+06 1.41366e+07 147 1.40841e+07 8.49856e+06 0.00292075 1.41387e+07 50.0968 0.00248443 0.986696 0 50.1916 GTEX-13S7M-1826-SM-5RQK6 2 C1 6 pieces; moderate chronic gastritis 6.6 Stomach Stomach 0000945 616 929 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.986668 165542 0.976093 0.988009 0.790788 22319 1 76 0.00305138 193 0 6.45595e+07 0.0210333 598768 6.5343e+07 3.32386e+06 22345 3.20384e+07 0 0.185305 0.988009 0.781306 6.45595e+07 0.00385 1.44744e+07 1.75849e+07 1.47329e+07 164 1.47266e+07 1.03348e+07 0.00345015 1.45674e+07 49.7283 0.00916346 0.989351 0 50.4425 GTEX-13S7M-2126-SM-5S2QR 1 C1 2 pieces; emphysema; mild fibrosis; congestion; bronchus with cartilage in 1 piece 7.7 Lung Lung 0008952 623 923 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.990786 220409 0.974212 0.992371 0.750906 22897 1 76 0.00201165 157 0 7.65674e+07 0.0253267 226999 7.7156e+07 3.80588e+06 22928 3.80768e+07 0 0.223306 0.992371 0.745177 7.65674e+07 0.00278655 1.69167e+07 6.74579e+06 1.70527e+07 180 1.70238e+07 1.15857e+07 0.00239848 1.70678e+07 50.0646 0.00294208 0.993956 0 50.2002 GTEX-13S7M-2226-SM-5S2WB 1 C1 2 pieces; large calcified atheromatous plaque; well trimmed 6.3 Blood Vessel Artery - Coronary 0001621 629 918 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988552 181397 0.976648 0.990748 0.762066 21141 1 76 0.00204801 147 0 6.64239e+07 0.0230437 347055 6.70441e+07 6.63346e+06 21163 3.30258e+07 0 0.214582 0.990748 0.755015 6.64239e+07 0.00321677 1.44397e+07 6.59113e+06 1.45375e+07 155 1.45072e+07 1.12074e+07 0.00263109 1.46148e+07 50.1847 0.00517651 0.992945 0 50.1689 GTEX-13S7M-3026-SM-5S2QQ 2 C1 4 pieces 6.7 Brain Brain - Cerebellum 0002037 641 911 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991787 360018 0.932597 0.992878 0.694895 22356 1 76 0.00207187 110 0 5.5934e+07 0.067066 604789 5.63352e+07 3.43138e+06 22378 2.78555e+07 0 0.237703 0.992878 0.689946 5.5934e+07 0.00273863 1.183e+07 1.56873e+07 1.2068e+07 127 1.20493e+07 6.22475e+06 0.00240488 1.19104e+07 49.7101 0.0107355 0.993969 0 50.498 GTEX-13S7M-3126-SM-5RQJQ 2 C1 4 pieces 8 Brain Brain - Cortex 0001870 645 907 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99103 248122 0.966468 0.992713 0.839677 23137 1 76 0.00195525 198 0 7.00287e+07 0.0333025 3.857e+06 7.05428e+07 3.72726e+06 23148 3.48629e+07 0 0.126791 0.992713 0.833558 7.00287e+07 0.00287915 1.52738e+07 1.00283e+07 1.57878e+07 236 1.56259e+07 6.68964e+06 0.00241642 1.55314e+07 49.8483 0.054676 0.994397 0 50.8274 GTEX-13S86-0003-SM-5DU4X B1 Blood Whole Blood 0013756 -133 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13S86-0003-SM-5HJPD B1 Blood Whole Blood 0013756 -133 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13S86-0003-SM-6WSCT B1 Blood Whole Blood 0013756 -133 BP-45103 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/28/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13S86-0005-SM-5NQ7I B1 8.7 Blood Whole Blood 0013756 -133 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991196 1.99571e+06 0.923743 0.992968 0.77925 18704 1 76 0.00223174 119 0 7.00158e+07 0.0758752 354479 7.05117e+07 5.76066e+06 18714 3.48634e+07 0 0.144494 0.992968 0.77377 7.00158e+07 0.00343464 1.4895e+07 6.7852e+07 1.51062e+07 134 1.5098e+07 1.46291e+07 0.00283212 1.50917e+07 49.9896 0.00502724 0.99474 0 50.3521 GTEX-13S86-0126-SM-5S2PI 1 B1 2 pieces; moderately congested 6.9 Spleen Spleen 0002106 132 868 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992487 190340 0.959572 0.993558 0.77896 22267 1 76 0.00220263 122 0 5.56584e+07 0.0393961 293996 5.60193e+07 3.32693e+06 22281 2.76912e+07 0 0.180612 0.993558 0.773943 5.56584e+07 0.00298961 1.21954e+07 1.01908e+07 1.23536e+07 134 1.23099e+07 8.37706e+06 0.0025957 1.23028e+07 49.9856 0.00524812 0.99463 0 50.3222 GTEX-13S86-0226-SM-5S2PJ 1 B1 2 pieces 8.1 Heart Heart - Left Ventricle 0006566 142 858 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994867 126117 0.981465 0.995805 0.856277 19124 1 76 0.0015717 124 0 5.97735e+07 0.0182653 2.50073e+06 6.00253e+07 3.32787e+06 19131 2.97991e+07 0 0.125188 0.995805 0.852685 5.97735e+07 0.00226099 1.31959e+07 8.48094e+06 1.33673e+07 163 1.32617e+07 9.59558e+06 0.00191602 1.33449e+07 50.1563 0.0416613 0.996743 0 50.3227 GTEX-13S86-0326-SM-5SI6K 1 B1 2 pieces; low fat & fibrous content 9.6 Heart Heart - Atrial Appendage 0006631 147 853 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990014 294743 0.981267 0.993436 0.864613 22141 1 76 0.0017721 270 0 1.02591e+08 0.0184217 3.02245e+06 1.03269e+08 1.07632e+07 22153 5.10228e+07 0 0.116654 0.993436 0.858938 1.02591e+08 0.00297649 2.23152e+07 1.20833e+07 2.24373e+07 316 2.24607e+07 1.91937e+07 0.00237222 2.26105e+07 50.1661 0.0292677 0.996857 0 50.1364 GTEX-13S86-0526-SM-5QGPZ 1 B1 2 pieces; eccentric atheromatous plaque up yo 1.3 mm thick; 10% external fat 7.3 Blood Vessel Artery - Coronary 0001621 158 842 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991401 230845 0.976505 0.99259 0.863935 21710 1 76 0.00185012 147 0 6.53748e+07 0.0231669 402285 6.58628e+07 4.64066e+06 21720 3.2566e+07 0 0.11257 0.99259 0.857533 6.53748e+07 0.00288162 1.42355e+07 7.02917e+06 1.4404e+07 162 1.43362e+07 1.33729e+07 0.00236525 1.43869e+07 50.0884 0.00610792 0.993779 0 50.2942 GTEX-13S86-0626-SM-5Q5E7 1 B1 2 pieces; moderate pulmonary edema; no chronic lesions 7.9 Lung Lung 0008952 164 836 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991372 161372 0.974939 0.993539 0.800278 24211 1 76 0.00222038 273 0 9.1555e+07 0.0246543 332233 9.21504e+07 1.38669e+07 24237 4.55812e+07 0 0.174661 0.993539 0.795107 9.1555e+07 0.00341592 2.03914e+07 8.70868e+06 2.05256e+07 259 2.05372e+07 1.65228e+07 0.00281685 2.05686e+07 50.0382 0.00360534 0.995706 0 50.1639 GTEX-13S86-0726-SM-5Q5DH 1 B1 5 pieces; well dissected 7.1 Esophagus Esophagus - Muscularis 0004648 175 825 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990737 150323 0.975617 0.993396 0.85141 21843 1 76 0.00198532 170 0 7.71025e+07 0.0240567 853505 7.76150e+07 1.07951e+07 21855 3.83548e+07 0 0.124207 0.993396 0.845787 7.71025e+07 0.00363425 1.68461e+07 6.6313e+06 1.68774e+07 196 1.68663e+07 1.4409e+07 0.00280758 1.70518e+07 50.2735 0.0109966 0.996054 0 50.0463 GTEX-13S86-0826-SM-5SI6J 0 B1 6 pieces; well preserved 9.7 Esophagus Esophagus - Mucosa 0006920 178 822 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991699 287103 0.975542 0.99386 0.821779 22380 1 76 0.00198674 168 0 8.10365e+07 0.0241775 382726 8.15372e+07 7.37136e+06 22395 4.03478e+07 0 0.153762 0.99386 0.816734 8.10365e+07 0.00308471 1.82024e+07 1.04417e+07 1.82652e+07 191 1.82723e+07 1.6337e+07 0.00253453 1.83668e+07 50.1289 0.00469388 0.996021 0 50.0861 GTEX-13S86-0926-SM-5SI6I 0 B1 2 pieces 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 183 817 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991981 256909 0.975112 0.994219 0.836843 22977 1 76 0.00186012 275 0 9.04914e+07 0.0245628 694894 9.10176e+07 8.26906e+06 22994 4.50539e+07 0 0.138269 0.994219 0.832006 9.04914e+07 0.00292675 1.99157e+07 9.06501e+06 2.00468e+07 272 2.00211e+07 1.64597e+07 0.00239223 2.01318e+07 50.1379 0.00763472 0.996458 0 50.1639 GTEX-13S86-1126-SM-5RQJX 1 B1 2 pieces 5.7 Thyroid Thyroid 0002046 192 808 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989477 216184 0.968732 0.990498 0.785045 22392 1 76 0.00217868 127 0 5.45374e+07 0.0310106 655909 5.50606e+07 2.89406e+06 22409 2.70967e+07 0 0.183687 0.990498 0.777586 5.45374e+07 0.00312182 1.20334e+07 5.93299e+06 1.20563e+07 145 1.20281e+07 7.55637e+06 0.00264977 1.21197e+07 50.1897 0.0119125 0.991519 0 50.0476 GTEX-13S86-1226-SM-5S2OA 1 B1 2 pieces; fibrofatty tissue without mammary ductal elements 5.9 Breast Breast - Mammary Tissue 0008367 198 802 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.988191 213102 0.980247 0.991004 0.867458 20835 1 76 0.0017237 149 0 6.40558e+07 0.019425 429586 6.46373e+07 4.98855e+06 20850 3.18313e+07 0 0.112789 0.991004 0.859654 6.40558e+07 0.00273436 1.40202e+07 6.2111e+06 1.4179e+07 162 1.41369e+07 1.3136e+07 0.0022276 1.4237e+07 50.1763 0.0066461 0.993817 0 50.2816 GTEX-13S86-1626-SM-5Q5C5 1 B1 6 pieces; well dissected except for 2 foci of external fat up to 3 mm thick 7.6 Colon Colon - Transverse 0001157 217 783 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988428 131636 0.972538 0.990772 0.830375 21635 1 76 0.00230202 127 0 5.39055e+07 0.025021 615039 5.44076e+07 4.09421e+06 21649 2.67587e+07 0 0.142163 0.990772 0.822712 5.39055e+07 0.00330559 1.19822e+07 6.73484e+06 1.19527e+07 135 1.19511e+07 9.081e+06 0.00280262 1.20993e+07 50.3081 0.0113043 0.993117 0 49.9385 GTEX-13S86-2326-SM-5RQK1 1 B1 2 pieces; 40 & 10% internal fat 8.2 Muscle Muscle - Skeletal 0011907 261 739 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.994578 133865 0.98301 0.99527 0.87402 19650 1 76 0.00170595 171 0 7.29848e+07 0.0167243 1.34187e+06 7.33317e+07 3.30157e+06 19654 3.63856e+07 0 0.10899 0.99527 0.869886 7.29848e+07 0.00229852 1.5936e+07 6.55238e+06 1.60035e+07 189 1.5946e+07 1.56141e+07 0.00200203 1.6039e+07 50.1454 0.0182986 0.995962 0 50.1057 GTEX-13S86-2426-SM-5S2MX 0 B1 2 pieces; well dissected except for 1x1 mm of external fat 5.9 Nerve Nerve - Tibial 0001323 270 730 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991012 222735 0.974723 0.992867 0.821947 22808 1 76 0.00178566 174 0 7.75514e+07 0.0249835 290193 7.81085e+07 5.92523e+06 22834 3.85627e+07 0 0.152776 0.992867 0.816084 7.75514e+07 0.00269218 1.69731e+07 6.97957e+06 1.72385e+07 193 1.7138e+07 1.4197e+07 0.00223807 1.72185e+07 50.1173 0.00371525 0.994722 0 50.3878 GTEX-13S86-2526-SM-5S2V5 0 B1 2 pieces; well dissected; small focus of calcium; no plaque 6 Blood Vessel Artery - Tibial 0007610 275 725 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992895 177158 0.977957 0.994581 0.852414 20328 1 76 0.00180131 163 0 7.37772e+07 0.0216356 490123 7.41792e+07 6.60032e+06 20337 3.67369e+07 0 0.125543 0.994581 0.847795 7.37772e+07 0.00293741 1.59778e+07 5.04947e+06 1.61344e+07 180 1.60909e+07 1.47462e+07 0.0023684 1.61434e+07 50.0815 0.00660729 0.996268 0 50.2437 GTEX-13S86-5019-SM-AN3ZV B1 Muscle Muscle - Skeletal 0011907 263 ChIP-Seq GTEX-13SLW-0003-SM-5DU4Y B1 Blood Whole Blood 0013756 1021 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13SLW-0003-SM-5HJRH B1 Blood Whole Blood 0013756 1021 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13SLW-0003-SM-6WSAP B1 Blood Whole Blood 0013756 1021 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13SLW-0011-R10a-SM-5S2UI B1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 1015 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991778 777789 0.949731 0.993942 0.83041 22995 1 76 0.00188832 266 0 7.78327e+07 0.0499578 4.96209e+06 7.83071e+07 8.05733e+06 23013 3.87401e+07 0 0.119321 0.993942 0.825379 7.78327e+07 0.00311171 1.67951e+07 2.5399e+07 1.69243e+07 285 1.67851e+07 8.08366e+06 0.00249868 1.71141e+07 50.4852 0.063367 0.996105 0 50.1917 GTEX-13SLW-0011-R10a-SM-AHZ71 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1015 ChIP-Seq GTEX-13SLW-0011-R11a-SM-5SI8Q B1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 1015 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989498 585625 0.938124 0.991988 0.734698 23071 1 76 0.00215922 158 0 7.52589e+07 0.0615489 1.53779e+06 7.58668e+07 7.01782e+06 23104 3.74158e+07 0 0.203426 0.991988 0.728811 7.52589e+07 0.00338753 1.6015e+07 1.5084e+07 1.61926e+07 196 1.61718e+07 8.1437e+06 0.00277183 1.62138e+07 50.0649 0.0202696 0.994477 0 50.2758 GTEX-13SLW-0011-R1a-SM-5S2W7 B1, A1 6.8 Brain Brain - Hippocampus 0001954 1015 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990786 669600 0.952527 0.993537 0.83279 22008 1 76 0.00193688 194 0 6.78789e+07 0.0473162 7.4201e+06 6.83204e+07 7.01903e+06 22019 3.3762e+07 0 0.119736 0.993537 0.827408 6.78789e+07 0.00330834 1.47735e+07 2.52312e+07 1.48867e+07 247 1.46541e+07 4.76007e+06 0.00262071 1.51809e+07 50.8829 0.108607 0.996288 0 50.1907 GTEX-13SLW-0011-R2b-SM-5O9C6 B1, A1 6.2 Brain Brain - Substantia nigra 0002038 1015 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986753 442680 0.970874 0.98926 0.847015 22516 1 76 0.00338828 371 0 1.0591e+08 0.0289517 9.72509e+06 1.0706e+08 4.40988e+06 22532 5.26355e+07 0 0.123859 0.98926 0.837918 1.0591e+08 0.00443143 2.3e+07 3.47900e+07 2.35696e+07 372 2.32043e+07 8.93342e+06 0.00390853 2.35613e+07 50.3817 0.0908375 0.991766 0 50.6116 GTEX-13SLW-0011-R3b-SM-5SI6Y B1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1015 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.99085 890888 0.948923 0.993474 0.828748 22535 1 76 0.00192358 264 0 7.74628e+07 0.0508479 7.2987e+06 7.79717e+07 7.07166e+06 22548 3.85465e+07 0 0.120175 0.993474 0.823339 7.74628e+07 0.0032612 1.67479e+07 3.3512e+07 1.6717e+07 330 1.65834e+07 6.13394e+06 0.00259062 1.70848e+07 50.7445 0.093607 0.996097 0 49.9539 GTEX-13SLW-0011-R4b-SM-5S2W2 B1, A1 6.8 Brain Brain - Amygdala 0001876 1015 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990766 2.08515e+06 0.934789 0.992839 0.783101 25129 1 76 0.00191377 371 0 1.28329e+08 0.0649408 1.17877e+07 1.29255e+08 1.30905e+07 25162 6.39038e+07 0 0.151688 0.992839 0.777493 1.28329e+08 0.00295132 2.70801e+07 8.63691e+07 2.72565e+07 372 2.68238e+07 1.04122e+07 0.00243146 2.77941e+07 50.8883 0.0911976 0.994912 0 50.1624 GTEX-13SLW-0011-R5b-SM-5SI6Z B1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 1015 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991655 1.14639e+06 0.943049 0.993839 0.80413 24244 1 76 0.00195837 268 0 9.12654e+07 0.0566471 5.62397e+06 9.18311e+07 8.16099e+06 24267 4.54481e+07 0 0.138919 0.993839 0.799176 9.12654e+07 0.00302232 1.96214e+07 4.20159e+07 1.95155e+07 302 1.94086e+07 9.68128e+06 0.00248917 1.99376e+07 50.6722 0.0612425 0.996024 0 49.8647 GTEX-13SLW-0011-R6a-SM-5O9BH B1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1015 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.981306 1.03088e+06 0.955842 0.984166 0.818877 24129 1 76 0.00362382 515 0 1.30202e+08 0.0440212 1.60193e+07 1.32297e+08 6.54012e+06 24151 6.45474e+07 0 0.136965 0.984166 0.80591 1.30202e+08 0.00485959 2.80036e+07 5.53613e+07 2.85268e+07 471 2.82526e+07 7.85595e+06 0.00423991 2.86103e+07 50.3145 0.121086 0.987025 0 50.4628 GTEX-13SLW-0011-R8b-SM-5SI64 B1, A1 8 Brain Brain - Hypothalamus 0001898 1015 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990603 764695 0.945834 0.993334 0.808419 24001 1 76 0.00193547 201 0 7.2451e+07 0.0538738 3.03073e+06 7.29372e+07 6.82586e+06 24020 3.6037e+07 0 0.137415 0.993334 0.80303 7.2451e+07 0.0033079 1.55985e+07 2.19082e+07 1.57292e+07 224 1.56138e+07 7.68902e+06 0.0026198 1.5916e+07 50.4793 0.0415525 0.996064 0 50.2085 GTEX-13SLW-0011-R9a-SM-5O9BT B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1015 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.980186 741100 0.951859 0.982989 0.805216 25120 1 76 0.00369173 377 0 1.18053e+08 0.047866 7.34478e+06 1.20096e+08 5.74996e+06 25153 5.85221e+07 0 0.146643 0.982989 0.791518 1.18053e+08 0.00480984 2.55971e+07 2.81456e+07 2.63091e+07 414 2.61435e+07 1.16469e+07 0.00424919 2.60699e+07 49.9296 0.0611576 0.985792 0 50.6858 GTEX-13SLW-0126-SM-5SI6C 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~30 microns 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1187 713 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989417 223062 0.970197 0.992334 0.76921 23582 1 76 0.00203365 197 0 8.0565e+07 0.0295902 597991 8.11874e+07 7.64721e+06 23612 4.00567e+07 0 0.200987 0.992334 0.763313 8.0565e+07 0.0033931 1.75053e+07 8.95444e+06 1.76224e+07 195 1.75935e+07 1.26275e+07 0.00271138 1.77638e+07 50.2409 0.00736556 0.99525 0 50.1668 GTEX-13SLW-0226-SM-5S2NA 0 B1 2 pieces, <10% fascia 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1187 713 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991613 190714 0.974449 0.993521 0.79054 22528 1 76 0.0018369 150 0 6.84047e+07 0.0252883 532830 6.88508e+07 4.94118e+06 22549 3.4018e+07 0 0.18391 0.993521 0.785418 6.84047e+07 0.00274909 1.49249e+07 7.59876e+06 1.51888e+07 169 1.51056e+07 1.09176e+07 0.00229212 1.51374e+07 50.0526 0.00773891 0.995429 0 50.4381 GTEX-13SLW-0326-SM-5RQK5 0 B1 2 pieces, moderate atrophy 7.4 Muscle Muscle - Skeletal 0011907 1188 712 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993284 160271 0.974316 0.99419 0.828474 21376 1 76 0.00183737 133 0 6.21249e+07 0.0254565 545001 6.24879e+07 3.10232e+06 21389 3.0954e+07 0 0.145842 0.99419 0.823661 6.21249e+07 0.00253334 1.34913e+07 6.07806e+06 1.36305e+07 149 1.35729e+07 1.15855e+07 0.00218504 1.3603e+07 50.0555 0.0087217 0.995096 0 50.2567 GTEX-13SLW-0326-SM-CYKUV 0 B1 2 pieces, moderate atrophy 7.4 Muscle Muscle - Skeletal 0011907 1188 712 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 RIP-Seq GTEX-13SLW-0626-SM-5Q5ER 0 B1 6 pieces, no dermal fat, squamous epithelium is ~50 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1232 668 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987238 221405 0.972486 0.990841 0.762923 22499 1 76 0.0022203 155 0 7.13784e+07 0.0272549 490766 7.20382e+07 1.06702e+07 22535 3.54648e+07 0 0.209562 0.990841 0.755936 7.13784e+07 0.00408916 1.55808e+07 9.92366e+06 1.57157e+07 165 1.57231e+07 1.10374e+07 0.00315133 1.58249e+07 50.1614 0.00681258 0.994444 0 50.2156 GTEX-13SLW-0826-SM-5QGP7 1 B1 2 pieces, no abnormalities 7.4 Heart Heart - Atrial Appendage 0006631 1236 664 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993344 225544 0.977797 0.994794 0.81485 20661 1 76 0.00182251 133 0 5.89022e+07 0.0220105 1.98249e+06 5.92104e+07 3.95252e+06 20674 2.93265e+07 0 0.162947 0.994794 0.810607 5.89022e+07 0.00303784 1.25913e+07 8.08419e+06 1.26084e+07 159 1.25695e+07 8.16456e+06 0.00242929 1.27163e+07 50.2904 0.0334821 0.996244 0 50.0339 GTEX-13SLW-1226-SM-5S2Q7 2 B1 2 pieces patchy chronic fibrosing pneumonitis; fibrin aggregates noted 6.4 Lung Lung 0008952 1250 650 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.991757 174339 0.970533 0.992844 0.779401 24195 1 76 0.00191091 167 0 8.09201e+07 0.0291857 177428 8.15033e+07 4.31434e+06 24223 4.02509e+07 0 0.191131 0.992844 0.773824 8.09201e+07 0.00268979 1.76502e+07 9.78329e+06 1.78485e+07 197 1.77418e+07 1.3294e+07 0.00229993 1.78487e+07 50.1501 0.00217694 0.993931 0 50.2793 GTEX-13SLW-1226-SM-CYKW6 2 B1 2 pieces patchy chronic fibrosing pneumonitis; fibrin aggregates noted 6.4 Lung Lung 0008952 1250 650 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 RIP-Seq GTEX-13SLW-2526-SM-62LDQ 1 B1 2 pieces, prominent gynecomastoid stromal hyperplasia; trace ductal elements present; rep delineated. 6.1 Breast Breast - Mammary Tissue 0008367 1275 625 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988378 129545 0.976947 0.991848 0.832941 22855 1 76 0.00283912 158 0 7.12173e+07 0.0227006 292860 7.18026e+07 4.80988e+06 22881 3.538e+07 0 0.144006 0.991848 0.826151 7.12173e+07 0.00363826 1.56398e+07 8.7605e+06 1.57637e+07 162 1.57479e+07 1.47442e+07 0.0032373 1.58927e+07 50.2288 0.00407868 0.995319 0 50.1971 GTEX-13SLW-2826-SM-5Q5ES 2 B1 6 pieces, essentially all muscularis, minut focus of completely autolyzed mucosa 6.9 Colon Colon - Sigmoid 0001159 1284 616 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989844 162130 0.970761 0.992213 0.792864 23280 1 76 0.00218736 147 0 7.03321e+07 0.0289361 348334 7.0884e+07 9.71291e+06 23306 3.49781e+07 0 0.177897 0.992213 0.78669 7.03321e+07 0.00349172 1.52525e+07 6.43208e+06 1.53426e+07 161 1.53185e+07 1.2177e+07 0.00283798 1.54368e+07 50.1923 0.00491414 0.994582 0 50.1473 GTEX-13SLW-2926-SM-5Q5BQ 1 B1 1 pieces, mainly adenohypophysis; 7x4mm portion of neurohypophysis, delineated 7.3 Pituitary Pituitary 0000007 1320 580 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986806 273823 0.959963 0.990229 0.760678 23931 1 76 0.00182228 127 0 6.59789e+07 0.0398177 268032 6.66299e+07 4.97286e+06 23963 3.27811e+07 0 0.199284 0.990229 0.753246 6.59789e+07 0.002883 1.41519e+07 1.26104e+07 1.42142e+07 141 1.42525e+07 1.10858e+07 0.00235081 1.43308e+07 50.137 0.0040227 0.993652 0 50.1097 GTEX-13SLX-0003-SM-5DU5R B1 Blood Whole Blood 0013756 930 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13SLX-0003-SM-5HJPY B1 Blood Whole Blood 0013756 930 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13SLX-0003-SM-6WSAO B1 Blood Whole Blood 0013756 930 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13SLX-0005-SM-CM2RF B1 8.5 Blood Whole Blood 0013756 930 BP-45148 RNA isolation_PAXgene Blood RNA (Manual) 10/28/2013 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.981802 418343 0.983589 0.983258 0.767573 20339 1 76 0.00211554 157 0 1.12832e+08 0.0155687 237441 1.14754e+08 6.65913e+06 20363 5.61274e+07 0 0.216016 0.983258 0.754723 1.12832e+08 0.00297869 2.63855e+07 1.11393e+08 2.63786e+07 186 2.64646e+07 2.72249e+07 0.00254647 2.64744e+07 50.0093 0.00206914 0.984714 0 49.9935 GTEX-13SLX-0011-R10a-SM-5P9HV B1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 934 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991963 886012 0.947078 0.992449 0.822259 24598 1 76 0.00333988 273 0 1.12962e+08 0.0526172 5.42096e+06 1.13821e+08 3.73936e+06 24619 5.6278e+07 0 0.124819 0.992449 0.81605 1.12962e+08 0.00358419 2.42085e+07 3.60722e+07 2.46169e+07 319 2.43762e+07 1.18047e+07 0.00346197 2.44947e+07 50.1212 0.047627 0.992936 0 50.4182 GTEX-13SLX-0011-R10a-SM-AHZ6P B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 934 ChIP-Seq GTEX-13SLX-0011-R11b-SM-5O9C8 B1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 934 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985747 503890 0.951664 0.987991 0.738559 25157 1 76 0.00395318 378 0 1.39632e+08 0.0478871 1.51502e+06 1.41329e+08 5.45816e+06 25198 6.93676e+07 0 0.213105 0.987991 0.729689 1.39632e+08 0.00485713 3.04838e+07 3.37241e+07 3.05648e+07 334 3.07772e+07 1.71664e+07 0.00440413 3.05625e+07 49.825 0.0107198 0.990235 0 50.0663 GTEX-13SLX-0011-R2b-SM-5S2VP B1, A1 6.5 Brain Brain - Substantia nigra 0002038 934 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990821 426888 0.962869 0.993569 0.833409 23115 1 76 0.00221361 207 0 7.49633e+07 0.0368166 5.32865e+06 7.54486e+07 7.27687e+06 23134 3.72923e+07 0 0.12946 0.993569 0.82805 7.49633e+07 0.00339891 1.65316e+07 1.57428e+07 1.66743e+07 246 1.65602e+07 8.70404e+06 0.00280462 1.68393e+07 50.4179 0.0706263 0.996317 0 50.2148 GTEX-13SLX-0011-R4a-SM-5O9BJ B1, A1 6.1 Brain Brain - Amygdala 0001876 934 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983969 725953 0.961209 0.986841 0.846393 23953 1 76 0.00398676 519 0 1.23595e+08 0.0385771 1.49921e+07 1.25243e+08 6.00574e+06 23972 6.13148e+07 0 0.114816 0.986841 0.835256 1.23595e+08 0.00520703 2.68479e+07 3.84226e+07 2.75065e+07 441 2.72042e+07 1.00037e+07 0.00459512 2.74417e+07 50.2174 0.119704 0.989713 0 50.6058 GTEX-13SLX-0011-R5a-SM-5O9BV B1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 934 BP-47873 RNA isolation_PAXgene Tissue miRNA 01/06/2014 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986376 948729 0.949235 0.98875 0.797293 25834 1 76 0.0037994 373 0 1.36653e+08 0.0504273 7.85929e+06 1.38208e+08 5.49727e+06 25864 6.79342e+07 0 0.151942 0.98875 0.788323 1.36653e+08 0.00475974 2.93323e+07 4.87634e+07 2.95918e+07 343 2.95632e+07 1.41313e+07 0.00427842 2.96512e+07 50.0744 0.0568657 0.991123 0 50.2202 GTEX-13SLX-0011-R6a-SM-5PNX4 B1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 934 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992489 407156 0.96125 0.993279 0.818807 25296 1 76 0.00328146 273 0 1.07604e+08 0.0382752 6.17282e+06 1.08332e+08 3.0611e+06 25330 5.35977e+07 0 0.142444 0.993279 0.813303 1.07604e+08 0.00363712 2.35952e+07 2.07141e+07 2.38377e+07 320 2.37284e+07 1.42475e+07 0.00345915 2.37878e+07 50.0625 0.0569807 0.994069 0 50.2557 GTEX-13SLX-0011-R8b-SM-5PNWZ B1, A1 6.7 Brain Brain - Hypothalamus 0001898 934 BP-48180 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992241 514194 0.960227 0.993164 0.835941 24604 1 76 0.00328553 379 0 1.14993e+08 0.0394982 9.02322e+06 1.15784e+08 3.08116e+06 24628 5.72892e+07 0 0.124285 0.993164 0.830227 1.14993e+08 0.00372008 2.51402e+07 2.23999e+07 2.57831e+07 340 2.5443e+07 1.32996e+07 0.0035026 2.5577e+07 50.1314 0.0779313 0.994087 0 50.6313 GTEX-13SLX-0011-R9b-SM-5SI6X B1, A1 8.1 Brain Brain - Spinal cord (cervical c-1) 0006469 934 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990909 729223 0.955284 0.993683 0.822053 23797 1 76 0.00209778 287 0 8.6406e+07 0.0443584 2.55622e+06 8.69554e+07 8.35888e+06 23816 4.2986e+07 0 0.13323 0.993683 0.81686 8.6406e+07 0.003384 1.89584e+07 1.93427e+07 1.92445e+07 290 1.91243e+07 1.1457e+07 0.00273909 1.93156e+07 50.2488 0.0293969 0.996457 0 50.3744 GTEX-13SLX-0126-SM-5S2MM 1 B1 2 pieces; small amounts of external/internal fat and connective tissue 5.9 Nerve Nerve - Tibial 0001323 1057 577 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991238 166581 0.961437 0.992465 0.718814 23799 1 76 0.00202399 161 0 7.26977e+07 0.0383169 263081 7.32496e+07 4.85268e+06 23833 3.61711e+07 0 0.242623 0.992465 0.713398 7.26977e+07 0.00281877 1.58682e+07 6.69132e+06 1.60314e+07 167 1.59359e+07 9.75915e+06 0.00242089 1.60544e+07 50.1852 0.00359157 0.993693 0 50.2558 GTEX-13SLX-0326-SM-5Q5E4 1 B1 2 pieces; well trimmed 8.2 Muscle Muscle - Skeletal 0011907 1061 573 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991581 177211 0.986946 0.994173 0.890131 19188 1 76 0.00204671 199 0 8.15408e+07 0.0128369 836243 8.20187e+07 1.07286e+07 19194 4.05954e+07 0 0.0968149 0.994173 0.884944 8.15408e+07 0.00361926 1.78817e+07 8.36716e+06 1.78788e+07 206 1.7845e+07 1.82373e+07 0.00283093 1.81053e+07 50.362 0.0101958 0.996765 0 49.996 GTEX-13SLX-0326-SM-CYKVN 1 B1 2 pieces; well trimmed 8.2 Muscle Muscle - Skeletal 0011907 1061 573 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 RIP-Seq GTEX-13SLX-0426-SM-5QGRC 1 B1 2 pieces; small amounts of interstitial fibrovascular tissue 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1062 572 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993286 183041 0.977562 0.994492 0.814596 22041 1 76 0.00203709 143 0 6.36407e+07 0.0221124 245040 6.39932e+07 4.40021e+06 22057 3.17045e+07 0 0.162966 0.994492 0.810109 6.36407e+07 0.00295648 1.40532e+07 5.86561e+06 1.41823e+07 150 1.41407e+07 1.17878e+07 0.00249623 1.41719e+07 50.0551 0.00382916 0.995698 0 50.2287 GTEX-13SLX-0526-SM-5S2ON 1 B1 6 pieces; 46um thick epidermis; up to 10% internal and external fat; compact keratosis 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1063 571 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992429 287996 0.974471 0.99421 0.796868 22691 1 76 0.00196074 172 0 6.30619e+07 0.0252423 127909 6.34291e+07 4.50571e+06 22709 3.13734e+07 0 0.177603 0.99421 0.792254 6.30619e+07 0.0028097 1.35842e+07 6.44164e+06 1.36457e+07 147 1.36344e+07 1.15068e+07 0.00238446 1.37046e+07 50.1284 0.00201657 0.995991 0 50.1129 GTEX-13SLX-0926-SM-5S2NM 1 B1 2 pieces 7.1 Heart Heart - Atrial Appendage 0006631 1081 553 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992771 310979 0.974943 0.994159 0.780682 21623 1 76 0.00190855 121 0 6.27887e+07 0.0247884 779422 6.31576e+07 4.62591e+06 21647 3.12372e+07 0 0.194261 0.994159 0.776122 6.27887e+07 0.00275156 1.34304e+07 5.7498e+06 1.35654e+07 143 1.35073e+07 1.05953e+07 0.00232946 1.35691e+07 50.1141 0.0123409 0.995548 0 50.25 GTEX-13SLX-1026-SM-5ZZUQ 1 B1 2 pieces; patchy and diffuse interstitial fibrosis, hypertrophy 6.5 Heart Heart - Left Ventricle 0006566 1082 552 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994909 168550 0.981441 0.996052 0.858779 21742 1 76 0.002118 268 0 8.9858e+07 0.0183377 3.27828e+06 9.02142e+07 8.07888e+06 21759 4.48067e+07 0 0.122662 0.996052 0.855388 8.9858e+07 0.00315695 1.99086e+07 1.26681e+07 2.00191e+07 278 2.00232e+07 1.56918e+07 0.00263688 1.99939e+07 49.9633 0.0363388 0.997195 0 50.1384 GTEX-13SLX-1026-SM-CYKVQ 1 B1 2 pieces; patchy and diffuse interstitial fibrosis, hypertrophy 6.5 Heart Heart - Left Ventricle 0006566 1082 552 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 RIP-Seq GTEX-13SLX-1226-SM-5S2Q6 1 B1 2 pieces; periportal fibrosis with chronic inflammation and early bridging fibrosis 6.1 Liver Liver 0001114 1101 533 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993001 153035 0.971982 0.993787 0.807565 20677 1 76 0.00204609 115 0 5.4224e+07 0.0278426 364510 5.4563e+07 3.04393e+06 20693 2.70015e+07 0 0.164417 0.993787 0.802547 5.4224e+07 0.00286626 1.16527e+07 6.66721e+06 1.17861e+07 125 1.17257e+07 1.01649e+07 0.00245585 1.17569e+07 50.0664 0.00668053 0.994573 0 50.2845 GTEX-13SLX-1326-SM-5S2QS 3 B1 2 pieces; moderate to severe autolysis, sparsely scattered islets 6.1 Pancreas Pancreas 0001150 1102 532 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992391 221890 0.977051 0.993641 0.842843 19427 1 76 0.0019451 97 0 6.12794e+07 0.0227505 164402 6.16716e+07 3.58657e+06 19437 3.0512e+07 0 0.134208 0.993641 0.837483 6.12794e+07 0.00273772 1.41588e+07 2.79876e+07 1.44091e+07 110 1.43217e+07 1.99802e+07 0.00234091 1.43306e+07 50.0156 0.00266577 0.994891 0 50.4381 GTEX-13SLX-1726-SM-5Q5E5 1 B1 6 pieces; congestion, squamous epithelium up to 0.3mm 7 Esophagus Esophagus - Mucosa 0006920 1115 519 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991197 200935 0.975174 0.993441 0.768855 22611 1 76 0.00228988 149 0 7.46394e+07 0.0246136 429995 7.51322e+07 9.76189e+06 22632 3.71258e+07 0 0.206319 0.993441 0.763811 7.46394e+07 0.00379467 1.66108e+07 8.47854e+06 1.673e+07 168 1.67002e+07 1.19804e+07 0.00304057 1.68081e+07 50.1611 0.00572318 0.995684 0 50.1786 GTEX-13SLX-1926-SM-5ZZUR 1 B1 6 pieces; well trimmed 6.4 Esophagus Esophagus - Muscularis 0004648 1117 517 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992771 140734 0.971618 0.994217 0.76527 24297 1 76 0.00228771 156 0 7.40383e+07 0.0281515 741581 7.4469e+07 6.95135e+06 24326 3.68755e+07 0 0.206348 0.994217 0.760845 7.40383e+07 0.00349135 1.59459e+07 6.04931e+06 1.60355e+07 168 1.59779e+07 1.11282e+07 0.00288865 1.61056e+07 50.199 0.00995825 0.995663 0 50.1401 GTEX-13SLX-2226-SM-62LEP 1 B1 6 pieces; hair bearing skin, few pieces with 5-10% external fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1149 485 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987333 143588 0.975135 0.991219 0.78068 22661 1 76 0.00307573 149 0 6.21927e+07 0.024684 280416 6.27436e+07 4.70926e+06 22686 3.08791e+07 0 0.194455 0.991219 0.773825 6.21927e+07 0.0038483 1.36065e+07 6.57392e+06 1.36831e+07 147 1.36842e+07 9.65948e+06 0.0034605 1.38301e+07 50.2652 0.00446924 0.995105 0 50.1405 GTEX-13SLX-2326-SM-5ZZWE 1 B1 2 pieces; fat and fibrocollagenous stroma with embedded ductal and lobular structures 6 Breast Breast - Mammary Tissue 0008367 1150 484 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992515 139772 0.976069 0.993986 0.73934 23191 1 76 0.00226289 135 0 6.46582e+07 0.0236148 224572 6.50494e+07 5.69921e+06 23222 3.21943e+07 0 0.236729 0.993986 0.734893 6.46582e+07 0.00350438 1.43585e+07 6.94655e+06 1.44082e+07 145 1.43627e+07 1.04145e+07 0.00288272 1.45018e+07 50.2411 0.00345233 0.995457 0 50.0863 GTEX-13SLX-2426-SM-664OM 1 B1 2 pieces; ovarian cortex with corpora albicantia 7.3 Ovary Ovary 0000992 1152 482 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992323 342570 0.958918 0.992932 0.750716 23441 1 76 0.00237553 220 0 9.80537e+07 0.0408313 80188 9.87516e+07 6.19832e+06 23480 4.88235e+07 0 0.208202 0.992932 0.74541 9.80537e+07 0.00309251 2.1245e+07 1.85775e+07 2.14213e+07 237 2.13628e+07 1.89166e+07 0.0027338 2.13709e+07 50.0095 0.000812017 0.993542 0 50.2066 GTEX-13SLX-3026-SM-5RQJU 1 B1 2 pieces (fragmented); adenohypophysis and portion of dura 6.8 Pituitary Pituitary 0000007 1202 432 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992073 252267 0.963984 0.99308 0.725772 24830 1 76 0.00230348 131 0 6.81438e+07 0.0357676 311969 6.86186e+07 3.45463e+06 24871 3.39275e+07 0 0.238212 0.99308 0.72075 6.81438e+07 0.00306258 1.45553e+07 7.7535e+06 1.46657e+07 147 1.46716e+07 1.01983e+07 0.00268264 1.46168e+07 49.9063 0.00454642 0.994088 0 50.189 GTEX-13SLX-3126-SM-5S2Q5 1 B1 2 pieces; cerebral cortex with attached meninges 5.7 Brain Brain - Cortex 0001870 1205 429 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992704 426750 0.956483 0.993818 0.829674 22365 1 76 0.00202063 150 0 6.21041e+07 0.0431809 2.90208e+06 6.24904e+07 3.7946e+06 22376 3.0936e+07 0 0.126809 0.993818 0.824545 6.21041e+07 0.00273401 1.34615e+07 1.6474e+07 1.37619e+07 173 1.36661e+07 7.64093e+06 0.00237692 1.36235e+07 49.922 0.0464404 0.994932 0 50.5518 GTEX-13SLX-3226-SM-5YYA6 1 B1 4 pieces; Purkinje cells present 7 Brain Brain - Cerebellum 0002037 1206 428 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991149 464550 0.945414 0.992135 0.718523 24071 1 76 0.00299797 273 0 9.92176e+07 0.0541974 1.38333e+06 1.00004e+08 4.59658e+06 24111 4.9381e+07 0 0.226891 0.992135 0.712872 9.92176e+07 0.0034323 2.14915e+07 2.67019e+07 2.16578e+07 271 2.16776e+07 1.14087e+07 0.00321492 2.15714e+07 49.8772 0.0138327 0.993121 0 50.1927 GTEX-13U4I-0004-SM-5DU3P C1 Blood Whole Blood 0013756 389 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13U4I-0004-SM-5HJPX C1 Blood Whole Blood 0013756 389 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13U4I-0004-SM-6WSAN C1 Blood Whole Blood 0013756 389 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13U4I-0006-SM-5N9CI C1 8.9 Blood Whole Blood 0013756 389 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.990051 1.71509e+06 0.92446 0.991028 0.748428 20661 1 76 0.00346428 117 0 6.59852e+07 0.0733725 427951 6.65826e+07 3.10524e+06 20681 3.28072e+07 0 0.176031 0.991028 0.741714 6.59852e+07 0.00392222 1.41151e+07 5.584e+07 1.4199e+07 123 1.42041e+07 1.25097e+07 0.00369303 1.42104e+07 50.0112 0.00642737 0.992005 0 50.1482 GTEX-13U4I-0126-SM-5LU38 0 C1 6 pieces, minimal fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 396 1048 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992129 200677 0.974476 0.994001 0.807738 24265 1 76 0.00377042 196 0 8.83297e+07 0.0252493 458186 8.88628e+07 1.0829e+07 24295 4.39799e+07 0 0.166738 0.994001 0.802893 8.83297e+07 0.00371588 1.93686e+07 9.46004e+06 1.94657e+07 202 1.9469e+07 1.63537e+07 0.0037432 1.95293e+07 50.0774 0.00515611 0.995873 0 50.1251 GTEX-13U4I-0226-SM-5SIB1 0 C1 2 pieces, fascia/vascular elements are 5-10% of tissue; rep delineated 7 Adipose Tissue Adipose - Subcutaneous 0002190 398 1047 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990083 233871 0.970467 0.993014 0.79151 23759 1 76 0.00202104 170 0 7.94091e+07 0.029227 410576 7.99677e+07 8.17414e+06 23784 3.94935e+07 0 0.178957 0.993014 0.785981 7.94091e+07 0.00312506 1.72186e+07 9.03176e+06 1.73859e+07 191 1.73809e+07 1.38703e+07 0.00257142 1.74454e+07 50.0926 0.00513427 0.995946 0 50.2418 GTEX-13U4I-0426-SM-5LU4W 0 C1 2 pieces, nubbin of adherent fat on one section, ~0.6mm, delineated. No significant atherosis; good specimens 6.9 Blood Vessel Artery - Tibial 0007610 405 1041 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992705 212700 0.975113 0.994429 0.83161 21517 1 76 0.00371481 138 0 7.53061e+07 0.0245096 217165 7.5728e+07 9.02925e+06 21534 3.75031e+07 0 0.143503 0.994429 0.826977 7.53061e+07 0.00357894 1.61814e+07 6.03984e+06 1.62852e+07 159 1.62701e+07 1.52928e+07 0.003647 1.63237e+07 50.0821 0.0028677 0.996152 0 50.1598 GTEX-13U4I-0526-SM-5LU59 1 C1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 415 1031 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991657 165187 0.965099 0.993384 0.735564 24452 1 76 0.00390308 118 0 6.4894e+07 0.0345309 215046 6.53261e+07 7.55564e+06 24488 3.2309e+07 0 0.229535 0.993384 0.730697 6.4894e+07 0.00370742 1.42195e+07 6.55986e+06 1.42379e+07 127 1.42579e+07 1.07157e+07 0.00380542 1.43075e+07 50.0869 0.00329188 0.995112 0 50.0323 GTEX-13U4I-0626-SM-5LU5L 1 C1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 416 1031 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991823 174202 0.972753 0.993936 0.816809 22561 1 76 0.00368933 153 0 7.40778e+07 0.0270009 1.42633e+06 7.45297e+07 8.91187e+06 22582 3.68817e+07 0 0.155944 0.993936 0.811856 7.40778e+07 0.00378055 1.60762e+07 7.98569e+06 1.60806e+07 184 1.59807e+07 1.08566e+07 0.00373484 1.63188e+07 50.5234 0.0191378 0.996049 0 50.0069 GTEX-13U4I-0826-SM-5SIBD 1 C1 2 pieces, no significant interstitial fibrosis 8.9 Heart Heart - Left Ventricle 0006566 421 1027 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992721 164670 0.982321 0.994888 0.851526 20832 1 76 0.00180382 199 0 7.9246e+07 0.0173784 1.30522e+06 7.96532e+07 7.97189e+06 20849 3.94726e+07 0 0.130795 0.994888 0.847173 7.9246e+07 0.0027607 1.75989e+07 1.27425e+07 1.75637e+07 255 1.74498e+07 1.43034e+07 0.00228122 1.78651e+07 50.5881 0.0163863 0.997056 0 49.95 GTEX-13U4I-0926-SM-5LU5A 1 C1 2 pieces, generally clean specimens; no significant atherosis 7.4 Blood Vessel Artery - Coronary 0001621 424 1024 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992567 238288 0.976749 0.994523 0.830833 21626 1 76 0.00363653 134 0 6.28396e+07 0.0228765 228832 6.31857e+07 7.13386e+06 21643 3.12832e+07 0 0.145916 0.994523 0.826283 6.28396e+07 0.00365584 1.34751e+07 4.76818e+06 1.35228e+07 135 1.34983e+07 1.26835e+07 0.00364616 1.36186e+07 50.2218 0.00362158 0.99648 0 50.0884 GTEX-13U4I-1026-SM-5LU3G 1 C1 6 pieces, inflamed atherotic plaque up to ~0.3mm 7.9 Blood Vessel Artery - Aorta 0001496 427 1022 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992707 169845 0.974519 0.994448 0.81325 22529 1 76 0.003774 146 0 7.3328e+07 0.0250465 247234 7.37374e+07 8.11723e+06 22548 3.65099e+07 0 0.161268 0.994448 0.808735 7.3328e+07 0.00369446 1.58401e+07 5.94917e+06 1.59476e+07 158 1.59403e+07 1.34912e+07 0.0037343 1.59717e+07 50.0491 0.0033529 0.996189 0 50.1691 GTEX-13U4I-1126-SM-5LU3S 1 C1 6 pieces, squamous mucosa well-preserved, ~0.3mm, 25-30% thickness 9.1 Esophagus Esophagus - Mucosa 0006920 432 1017 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991802 242529 0.972519 0.993612 0.80175 22590 1 76 0.00377485 135 0 6.63551e+07 0.0271887 268199 6.67817e+07 7.67334e+06 22605 3.3046e+07 0 0.170769 0.993612 0.796629 6.63551e+07 0.00372577 1.48733e+07 9.54268e+06 1.49014e+07 139 1.49161e+07 1.26965e+07 0.00375036 1.49813e+07 50.1089 0.00401606 0.995422 0 50.0471 GTEX-13U4I-1226-SM-5LU5M 1 C1 6 pieces, all muscularis, good specimens 7.3 Esophagus Esophagus - Muscularis 0004648 434 1016 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990814 196511 0.974478 0.992733 0.812255 22608 1 76 0.0036804 158 0 7.50621e+07 0.025254 768344 7.56116e+07 8.51537e+06 22629 3.7371e+07 0 0.162223 0.992733 0.806352 7.50621e+07 0.00370925 1.62628e+07 6.22483e+06 1.63119e+07 170 1.62699e+07 1.2462e+07 0.0036948 1.64449e+07 50.2674 0.0101617 0.994652 0 50.0754 GTEX-13U4I-1326-SM-5KM25 1 C1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 435 1015 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987606 179984 0.976758 0.990252 0.829106 22281 1 76 0.00382709 168 0 7.72414e+07 0.0229286 737410 7.80018e+07 3.63505e+06 22301 3.84011e+07 0 0.147652 0.990252 0.821023 7.72414e+07 0.0048562 1.66343e+07 6.57393e+06 1.68259e+07 174 1.68216e+07 1.39216e+07 0.00434027 1.68298e+07 50.0122 0.00945376 0.992897 0 50.2864 GTEX-13U4I-1426-SM-5J2M3 1 C1 2 pieces, mild atalectasis; well preserved bronchial mucosa delineated; foci of hyaline cartilage encircled 7.7 Lung Lung 0008952 437 1014 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983304 221108 0.969807 0.987277 0.755289 25719 1 76 0.00460554 205 0 9.7201e+07 0.0297044 627350 9.84537e+07 5.19685e+06 25766 4.82267e+07 0 0.214517 0.987277 0.74568 9.7201e+07 0.00638562 2.14011e+07 9.79877e+06 2.16122e+07 207 2.16987e+07 1.41708e+07 0.005492 2.1677e+07 49.975 0.00637203 0.991249 0 50.2454 GTEX-13U4I-1526-SM-5IFFF 1 C1 2 pieces, fairly well preserved, Islets visible, rep delineated 7.8 Pancreas Pancreas 0001150 439 1017 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.990248 245120 0.980352 0.99316 0.860892 21551 1 76 0.00219631 113 0 7.81126e+07 0.0193432 141686 7.86506e+07 8.77822e+06 21564 3.88577e+07 0 0.11946 0.99316 0.855004 7.81126e+07 0.00372753 1.78271e+07 2.05883e+07 1.78782e+07 125 1.79212e+07 2.33596e+07 0.00295967 1.80075e+07 50.1202 0.00180146 0.996072 0 50.0715 GTEX-13U4I-1626-SM-5IFFR 1 C1 2 pieces, mild congestion 7.7 Spleen Spleen 0002106 441 1015 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.983762 241270 0.959438 0.986556 0.781766 22949 1 76 0.00448532 124 0 6.15891e+07 0.0316539 333684 6.24284e+07 6.96715e+06 22973 3.03392e+07 0 0.177673 0.986556 0.771255 6.15891e+07 0.00601239 1.3669e+07 1.8588e+07 1.36506e+07 130 1.3763e+07 9.41644e+06 0.0052467 1.37245e+07 49.93 0.00534507 0.989349 0 49.9663 GTEX-13U4I-1726-SM-5J1MF 1 C1 2 pieces, no significant fibrosis 8.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 443 1013 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989558 225141 0.97641 0.991389 0.815364 24596 1 76 0.00397675 277 0 1.0241e+08 0.0231896 435829 1.033e+08 5.50036e+06 24628 5.09467e+07 0 0.161046 0.991389 0.808342 1.0241e+08 0.00458293 2.25482e+07 9.62201e+06 2.27293e+07 276 2.27237e+07 1.90262e+07 0.00427928 2.27384e+07 50.0162 0.00421908 0.993219 0 50.2001 GTEX-13U4I-1826-SM-5IJD2 0 C1 2 pieces, 5-10% interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 446 1010 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.98952 189491 0.979634 0.992762 0.84715 21052 1 76 0.00210021 203 0 7.6145e+07 0.0201453 789511 7.67002e+07 1.09143e+07 21067 3.78776e+07 0 0.132484 0.992762 0.841018 7.6145e+07 0.00365002 1.67042e+07 9.52827e+06 1.66751e+07 207 1.66481e+07 1.40087e+07 0.00287259 1.69581e+07 50.4612 0.0102935 0.996004 0 49.9564 GTEX-13U4I-1926-SM-5LU39 1 C1 2 pieces, mianly myometrium; ~4x2mm focus of inactive endometrium delineated 6.8 Uterus Uterus 0000995 450 1007 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991612 232635 0.963943 0.993479 0.743953 24286 1 76 0.00381423 162 0 8.66194e+07 0.0357739 173283 8.7188e+07 1.00379e+07 24323 4.31064e+07 0 0.21999 0.993479 0.739101 8.66194e+07 0.0037469 1.88172e+07 8.94372e+06 1.89192e+07 174 1.89098e+07 1.45196e+07 0.00378063 1.89878e+07 50.1029 0.00198746 0.995345 0 50.1351 GTEX-13U4I-2026-SM-5LU3L 0 C1 6 pieces, squamous epithelium is ~0.2mm 7 Vagina Vagina 0000996 452 1005 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991088 367375 0.969525 0.993097 0.74726 26249 1 76 0.00389383 283 0 1.15199e+08 0.0301804 398436 1.16e+08 1.32834e+07 26308 5.73274e+07 0 0.222264 0.993097 0.742102 1.15199e+08 0.00383267 2.54065e+07 1.18972e+07 2.55462e+07 283 2.55869e+07 1.96218e+07 0.00386331 2.55939e+07 50.0069 0.00343479 0.995107 0 50.1371 GTEX-13U4I-2126-SM-5LU55 1 C1 2 pieces, normal post menopausal atrophy/regressive changes 7.6 Ovary Ovary 0000992 454 1003 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99183 135931 0.965506 0.993621 0.731781 23211 1 76 0.00380703 125 0 6.11675e+07 0.0342191 134462 6.15602e+07 7.67697e+06 23251 3.04533e+07 0 0.233725 0.993621 0.727113 6.11675e+07 0.00366547 1.34107e+07 6.46356e+06 1.34833e+07 120 1.34891e+07 1.07343e+07 0.00373638 1.35129e+07 50.0441 0.00218424 0.995412 0 50.1348 GTEX-13U4I-2226-SM-5LU5H 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 457 1000 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991456 196201 0.965167 0.993416 0.735532 24423 1 76 0.00379858 141 0 6.91214e+07 0.0346593 605554 6.95795e+07 8.21243e+06 24459 3.44089e+07 0 0.229635 0.993416 0.73069 6.91214e+07 0.0037993 1.52053e+07 7.42722e+06 1.52468e+07 149 1.52131e+07 9.64139e+06 0.00379894 1.53752e+07 50.2649 0.00870305 0.995376 0 50.0682 GTEX-13U4I-2426-SM-5LU34 2 C1 6 pieces, mucosa moderately autolyzed, ~0.2mm, ~5010% thickness 7.1 Colon Colon - Transverse 0001157 463 995 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992354 219115 0.972788 0.994154 0.793251 22969 1 76 0.00371331 177 0 7.95094e+07 0.0269723 817833 7.99769e+07 8.9272e+06 23000 3.95946e+07 0 0.179537 0.994154 0.788614 7.95094e+07 0.00365161 1.72364e+07 7.98214e+06 1.7359e+07 182 1.73317e+07 1.29118e+07 0.00368251 1.74015e+07 50.1005 0.0102259 0.995955 0 50.1772 GTEX-13U4I-2526-SM-5SI8Z 1 C1 6 pieces, mucosa up to ~0.7mm, ~40% thickness, good specimens 6.9 Stomach Stomach 0000945 464 994 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989484 206989 0.971105 0.991962 0.78887 24340 1 76 0.00206893 267 0 8.22875e+07 0.0284352 660084 8.29543e+07 7.5019e+06 24371 4.09463e+07 0 0.182235 0.991962 0.782529 8.22875e+07 0.00331568 1.84397e+07 4.02204e+07 1.85083e+07 226 1.85191e+07 1.52e+07 0.00269075 1.86257e+07 50.1435 0.0079572 0.99444 0 50.0928 GTEX-13U4I-2626-SM-5SI9C 1 C1 6 pieces mainly muscularis, trace 'contaminant' mucosa, foci delineated 6.8 Colon Colon - Sigmoid 0001159 468 990 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992079 199390 0.971686 0.993861 0.784767 23498 1 76 0.00194946 275 0 9.003e+07 0.0281077 1.12648e+06 9.05862e+07 7.88466e+06 23530 4.48384e+07 0 0.186919 0.993861 0.779949 9.003e+07 0.00292009 1.95723e+07 9.32603e+06 1.97248e+07 275 1.96429e+07 1.31016e+07 0.00243391 1.98048e+07 50.2051 0.0124354 0.995642 0 50.194 GTEX-13VXT-0003-SM-5GY9Y B1 Blood Whole Blood 0013756 -186 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13VXT-0003-SM-5HJR7 B1 Blood Whole Blood 0013756 -186 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13VXT-0003-SM-6WSCL B1 Blood Whole Blood 0013756 -186 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 09/27/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13VXT-0005-SM-5N9F3 B1 8.8 Blood Whole Blood 0013756 -186 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987049 2.17466e+06 0.926997 0.988869 0.759994 19878 1 76 0.00477741 166 0 9.40984e+07 0.0720449 384897 9.51576e+07 5.1818e+06 19893 4.67616e+07 0 0.167003 0.988869 0.751534 9.40984e+07 0.00487903 1.98674e+07 7.50408e+07 2.0138e+07 175 2.01459e+07 1.79736e+07 0.00482813 2.00507e+07 49.8816 0.00404484 0.990689 0 50.3382 GTEX-13VXT-0126-SM-5LU4I 1 B1 6 pieces; subcutaneous fat on 4 of 6 pieces up to 1.5mm thick. 10% intradermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 438 828 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991785 216804 0.97406 0.993643 0.801453 23825 1 76 0.00391596 191 0 8.44601e+07 0.0256656 347346 8.50005e+07 9.47625e+06 23854 4.20551e+07 0 0.172607 0.993643 0.796358 8.44601e+07 0.00392968 1.85507e+07 8.76468e+06 1.86548e+07 188 1.86482e+07 1.49623e+07 0.0039228 1.87121e+07 50.0855 0.0040864 0.9955 0 50.1399 GTEX-13VXT-0226-SM-5LU9Q 1 B1 2 fragmented pieces 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 443 823 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990286 199071 0.97648 0.992253 0.8117 21767 1 76 0.00465316 129 0 5.95887e+07 0.0232028 248733 6.00539e+07 5.1344e+06 21781 2.96227e+07 0 0.16478 0.992253 0.805412 5.95887e+07 0.00401484 1.31463e+07 6.49965e+06 1.32045e+07 137 1.31743e+07 9.97741e+06 0.00433463 1.32959e+07 50.2297 0.00414183 0.99422 0 50.1104 GTEX-13VXT-0326-SM-5LU4U 1 B1 2 pieces; 10% internal fat in one; 10% fragmented tendon in other 8.6 Muscle Muscle - Skeletal 0011907 462 804 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993584 168008 0.980147 0.995202 0.870488 19484 1 76 0.00375781 169 0 7.14635e+07 0.019595 627492 7.18081e+07 8.57802e+06 19494 3.56149e+07 0 0.109659 0.995202 0.866311 7.14635e+07 0.00353474 1.56928e+07 7.75275e+06 1.58902e+07 166 1.57673e+07 1.44487e+07 0.00364646 1.59255e+07 50.2496 0.00873846 0.996819 0 50.3126 GTEX-13VXT-0426-SM-5LU57 1 B1 2 pieces; 60% external fibrofatty tissue in 1; 10% external muscle & 10% external fat in other piece 6.4 Nerve Nerve - Tibial 0001323 465 801 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990649 250818 0.963375 0.992816 0.730735 24244 1 76 0.00395595 163 0 7.70856e+07 0.036369 304212 7.76434e+07 8.87379e+06 24287 3.83467e+07 0 0.232639 0.992816 0.725486 7.70856e+07 0.00404415 1.6875e+07 8.76286e+06 1.69488e+07 163 1.69228e+07 1.08694e+07 0.00399995 1.70638e+07 50.2074 0.00391806 0.994983 0 50.1092 GTEX-13VXT-0526-SM-5SI9O 0 B1 2 pieces; external fat occupies 70% & 50% 7 Blood Vessel Artery - Tibial 0007610 467 799 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992752 216186 0.974239 0.994608 0.848701 21950 1 76 0.0019048 281 0 9.60645e+07 0.0253212 313666 9.65853e+07 9.31653e+06 21967 4.78387e+07 0 0.125538 0.994608 0.844125 9.60645e+07 0.00287077 2.05095e+07 8.04241e+06 2.0671e+07 285 2.06034e+07 1.93574e+07 0.00238688 2.07467e+07 50.1732 0.00324755 0.996465 0 50.1962 GTEX-13VXT-0626-SM-5SIA1 2 B1 2 pieces; fibrofatty capsule up to 1mm thick on 1 piece 6.3 Thyroid Thyroid 0002046 465 801 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989644 254071 0.961294 0.992393 0.737417 23431 1 76 0.00210375 132 0 6.75239e+07 0.0384444 124677 6.80415e+07 6.91659e+06 23463 3.35881e+07 0 0.223877 0.992393 0.731808 6.75239e+07 0.00337662 1.46099e+07 8.73574e+06 1.47397e+07 147 1.47436e+07 1.00965e+07 0.00273842 1.47824e+07 50.0657 0.00183237 0.995143 0 50.2211 GTEX-13VXT-0726-SM-5SIAD 0 B1 2 pieces; <5% extraneous fibrofatty tissue 6.7 Heart Heart - Atrial Appendage 0006631 473 793 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.9896 214550 0.977032 0.991921 0.817202 21535 1 76 0.00228348 267 0 8.92867e+07 0.0227442 3.17155e+06 9.00139e+07 9.37342e+06 21550 4.44622e+07 0 0.159831 0.991921 0.8106 8.92867e+07 0.00341526 1.92226e+07 2.9065e+07 1.94453e+07 314 1.89547e+07 9.13456e+06 0.00284804 1.98852e+07 51.1979 0.035234 0.994243 0 50.2879 GTEX-13VXT-0826-SM-5SIAP 1 B1 6 pieces; adventitia up to 1mm thick 5.9 Blood Vessel Artery - Aorta 0001496 485 781 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988444 213951 0.969956 0.99171 0.811644 23585 1 76 0.00199604 203 0 8.19899e+07 0.0297005 542470 8.26752e+07 8.34007e+06 23611 4.07497e+07 0 0.158312 0.99171 0.804916 8.19899e+07 0.00315785 1.76762e+07 9.26587e+06 1.77683e+07 206 1.77511e+07 1.43897e+07 0.00257503 1.79509e+07 50.2798 0.00656146 0.994976 0 50.1299 GTEX-13VXT-0926-SM-5LU5K 1 B1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 495 771 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99194 209999 0.971594 0.993927 0.797765 23681 1 76 0.00386182 168 0 8.2975e+07 0.0281673 292045 8.3482e+07 9.99257e+06 23705 4.1319e+07 0 0.17383 0.993927 0.792919 8.2975e+07 0.00388481 1.82048e+07 8.17465e+06 1.83127e+07 196 1.8272e+07 1.29753e+07 0.00387329 1.84082e+07 50.1857 0.0034983 0.995913 0 50.1477 GTEX-13VXT-1026-SM-5LU37 1 B1 2 pieces; 1 piece has only fibrofatty tissue, no artery; other contains 50% fibrofatty tissue and 2 arteries 6.5 Blood Vessel Artery - Coronary 0001621 498 768 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989122 247896 0.975401 0.991316 0.823203 23144 1 76 0.00399829 196 0 8.49078e+07 0.0243507 1.09758e+06 8.56517e+07 9.36308e+06 23165 4.22488e+07 0 0.152198 0.991316 0.816055 8.49078e+07 0.0040455 1.86919e+07 1.05401e+07 1.87497e+07 215 1.85832e+07 1.26097e+07 0.00402184 1.90362e+07 50.6021 0.0128144 0.99351 0 50.0772 GTEX-13VXT-1126-SM-5LU3A 1 B1 2 pieces; 1 piece contains 30% external fat 8.6 Heart Heart - Left Ventricle 0006566 503 763 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993158 203469 0.985921 0.994701 0.85539 20373 1 76 0.00385397 269 0 9.72424e+07 0.0138089 1.99676e+06 9.77604e+07 1.16083e+07 20387 4.84606e+07 0 0.130531 0.994701 0.850857 9.72424e+07 0.00365113 2.11901e+07 2.77702e+07 2.10688e+07 272 2.08387e+07 1.66103e+07 0.00375271 2.15542e+07 50.844 0.0204251 0.996245 0 49.8565 GTEX-13VXT-1226-SM-5LU3M 1 B1 2 pieces; islets small and sparse (circled) 7 Pancreas Pancreas 0001150 511 755 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992923 307120 0.972799 0.994802 0.831325 22360 1 76 0.00392847 124 0 8.60201e+07 0.0269552 176507 8.64695e+07 1.08503e+07 22378 4.28482e+07 0 0.141474 0.994802 0.827004 8.60201e+07 0.00385907 1.95339e+07 2.31383e+07 1.96638e+07 137 1.96883e+07 2.31683e+07 0.00389383 1.96803e+07 49.9899 0.00204126 0.996681 0 50.1657 GTEX-13VXT-1326-SM-5LU3Y 2 B1 2 pieces; congested 6.4 Spleen Spleen 0002106 518 748 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.987965 206060 0.9592 0.990011 0.745864 24335 1 76 0.00477108 139 0 7.90507e+07 0.0387685 379387 7.98482e+07 9.81919e+06 24371 3.92505e+07 0 0.213336 0.990011 0.738414 7.90507e+07 0.0047999 1.74262e+07 1.32177e+07 1.73965e+07 160 1.74433e+07 1.12652e+07 0.00478546 1.75397e+07 50.1377 0.00475135 0.992058 0 49.9574 GTEX-13VXT-1426-SM-5LU4B 1 B1 2 pieces; emphysema 7.7 Lung Lung 0008952 526 740 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991869 259844 0.96939 0.993592 0.788912 24517 1 76 0.00400243 162 0 7.88587e+07 0.0301483 231680 7.93673e+07 9.09988e+06 24551 3.92643e+07 0 0.180478 0.993592 0.783856 7.88587e+07 0.0038734 1.74312e+07 7.89195e+06 1.75209e+07 166 1.75264e+07 1.42793e+07 0.00393803 1.75579e+07 50.0449 0.00291909 0.995315 0 50.1283 GTEX-13VXT-1526-SM-5LU3J 1 B1 2 ; numerous ova and corpora; 1 mm thick fibrous 'cap' at end of 1 piece 6.3 Ovary Ovary 0000992 533 733 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990696 297740 0.960417 0.9925 0.712809 24623 1 76 0.00400675 213 0 9.78973e+07 0.0393533 126088 9.86371e+07 1.09451e+07 24679 4.87339e+07 0 0.247608 0.9925 0.707463 9.78973e+07 0.00387202 2.13371e+07 1.29303e+07 2.14834e+07 216 2.14846e+07 1.3957e+07 0.00393951 2.15104e+07 50.0301 0.0012783 0.994304 0 50.1709 GTEX-13VXT-1626-SM-5IJES 1 B1 2 pieces; 0.8mm thin inactive endometrium on 1 piece; only myometrium visualized on other 6.5 Uterus Uterus 0000995 538 728 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984449 248832 0.959675 0.986366 0.707657 25319 1 76 0.00495511 171 0 9.98082e+07 0.0400857 97414 1.01188e+08 6.80261e+06 25372 4.9557e+07 0 0.252017 0.986366 0.698009 9.98082e+07 0.00534274 2.15363e+07 9.60714e+06 2.17566e+07 193 2.17774e+07 1.43764e+07 0.00514855 2.17018e+07 49.913 0.000962705 0.988283 0 50.2544 GTEX-13VXT-1726-SM-5IFF5 0 B1 1 piece; well trimmed minor salivary gland 8.1 Salivary Gland Minor Salivary Gland 0006330 541 725 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.982151 268216 0.97717 0.98527 0.820623 22398 1 76 0.00276127 217 0 8.35176e+07 0.020875 134540 8.47661e+07 8.90496e+06 22419 4.14628e+07 0 0.156547 0.98527 0.808535 8.35176e+07 0.0041533 1.94534e+07 3.60313e+07 1.93568e+07 237 1.94427e+07 1.45466e+07 0.00345508 1.96274e+07 50.2364 0.00158719 0.98839 0 49.8756 GTEX-13VXT-1826-SM-5KM2F 1 B1 6 pieces; core of fibrous submucosa in all, occupies up to 20% 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 553 713 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987221 219694 0.97392 0.989861 0.830516 22432 1 76 0.00388577 208 0 8.91059e+07 0.0258435 611000 9.00186e+07 4.09842e+06 22448 4.42957e+07 0 0.143404 0.989861 0.822095 8.91059e+07 0.00509838 1.90206e+07 8.44212e+06 1.93127e+07 226 1.92299e+07 1.45116e+07 0.00449046 1.93219e+07 50.1193 0.00678749 0.992501 0 50.381 GTEX-13VXT-1926-SM-5K7UO 1 B1 6 pieces; well trimmed; free of intrademal fat and hair 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 553 713 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.983661 202606 0.974737 0.986516 0.806358 22753 1 76 0.00458394 176 0 7.73571e+07 0.0249998 285355 7.84145e+07 5.49944e+06 22775 3.84229e+07 0 0.168379 0.986516 0.795485 7.73571e+07 0.00545065 1.70549e+07 7.92349e+06 1.7164e+07 167 1.71978e+07 1.33126e+07 0.00501604 1.72395e+07 50.0606 0.00363906 0.98937 0 50.1594 GTEX-13VXT-2026-SM-5L3EW 1 B1 6 pieces; <1% glands on surface 7.5 Colon Colon - Sigmoid 0001159 563 703 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986432 169034 0.971683 0.990645 0.797086 21891 1 76 0.00320759 129 0 5.85644e+07 0.0280283 294901 5.91174e+07 5.86934e+06 21913 2.90867e+07 0 0.174597 0.990645 0.78963 5.85644e+07 0.00434814 1.27204e+07 5.82815e+06 1.27485e+07 134 1.27787e+07 9.58104e+06 0.00377544 1.29174e+07 50.27 0.0049884 0.994859 0 50.0551 GTEX-13VXT-2426-SM-5LU46 3 B1 6 pieces; autolyzed mucosa, preserved muscle & submucosa 7.5 Colon Colon - Transverse 0001157 590 676 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991304 180814 0.972981 0.993185 0.816252 23357 1 76 0.00404604 139 0 6.7899e+07 0.0261948 288284 6.83649e+07 8.40783e+06 23380 3.37914e+07 0 0.156729 0.993185 0.81069 6.7899e+07 0.00400025 1.47958e+07 6.97802e+06 1.48753e+07 145 1.48671e+07 1.20652e+07 0.00402319 1.49273e+07 50.101 0.00421684 0.995067 0 50.134 GTEX-13VXT-5007-SM-AN412 B1 Heart Heart - Left Ventricle 0006566 508 ChIP-Seq GTEX-13VXU-0004-SM-5DU5Q B1 Blood Whole Blood 0013756 727 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13VXU-0004-SM-5HJQS B1 Blood Whole Blood 0013756 727 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13VXU-0004-SM-6WSAS B1 Blood Whole Blood 0013756 727 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13VXU-0006-SM-5N9FF B1 8.8 Blood Whole Blood 0013756 727 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.971033 2.12293e+06 0.941445 0.972741 0.759854 19726 1 76 0.00431342 125 0 9.84879e+07 0.0580079 497628 1.01248e+08 5.21314e+06 19739 4.89494e+07 0 0.181591 0.972741 0.739141 9.84879e+07 0.00435046 2.19631e+07 1.50896e+08 2.23245e+07 153 2.22928e+07 2.31975e+07 0.00433191 2.22228e+07 49.9214 0.00491495 0.974449 0 50.4081 GTEX-13VXU-0011-R10a-SM-AHZ6R B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 758 ChIP-Seq GTEX-13VXU-0011-R10a-SM-CYKSP B1, A1 8.6 Brain Brain - Frontal Cortex (BA9) 0009834 758 BP-47889 RNA isolation_PAXgene Tissue miRNA 01/06/2014 RIP-Seq GTEX-13VXU-0011-R11b-SM-5O9DJ B1, A1 9.5 Brain Brain - Cerebellar Hemisphere 0002037 758 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98567 558143 0.949035 0.988053 0.73789 24501 1 76 0.00378954 271 0 1.09994e+08 0.0504321 1.26487e+06 1.11324e+08 4.50478e+06 24542 5.46205e+07 0 0.211145 0.988053 0.729074 1.09994e+08 0.00466967 2.38039e+07 1.54045e+07 2.38584e+07 277 2.40179e+07 1.49349e+07 0.00422854 2.38856e+07 49.8619 0.011362 0.990436 0 50.0572 GTEX-13VXU-0011-R3b-SM-5O9CU B1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 758 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986718 613081 0.959201 0.989333 0.835251 24764 1 76 0.00342554 371 0 1.07016e+08 0.0403504 4.97872e+06 1.0817e+08 4.59764e+06 24785 5.31614e+07 0 0.12395 0.989333 0.826342 1.07016e+08 0.00439076 2.32944e+07 2.1025e+07 2.3582e+07 340 2.3647e+07 1.27054e+07 0.00390687 2.34788e+07 49.8216 0.0460269 0.991948 0 50.3068 GTEX-13VXU-0011-R4b-SM-5O9CI B1, A1 7.3 Brain Brain - Amygdala 0001876 758 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985487 1.35052e+06 0.939766 0.988063 0.815451 24371 1 76 0.00347606 371 0 1.06811e+08 0.0598893 6.5593e+06 1.08101e+08 4.5995e+06 24389 5.30612e+07 0 0.124315 0.988063 0.805717 1.06811e+08 0.00456248 2.27256e+07 4.95923e+07 2.31551e+07 354 2.31968e+07 1.05613e+07 0.00401786 2.29475e+07 49.7299 0.0606774 0.990639 0 50.468 GTEX-13VXU-0011-R5a-SM-5O9D7 B1, A1 8.8 Brain Brain - Caudate (basal ganglia) 0001873 758 BP-47673 RNA isolation_PAXgene Tissue miRNA 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986496 1.25895e+06 0.937252 0.989082 0.782198 25289 1 76 0.00343039 268 0 1.09069e+08 0.0623888 5.4071e+06 1.10273e+08 4.25984e+06 25313 5.42255e+07 0 0.155055 0.989082 0.773658 1.09069e+08 0.00438549 2.30758e+07 5.56309e+07 2.32575e+07 315 2.32421e+07 1.10138e+07 0.00390669 2.33424e+07 50.1076 0.0490339 0.991668 0 50.1961 GTEX-13VXU-0011-R6a-SM-5SI71 B1, A1 9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 758 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991726 849684 0.949412 0.993956 0.814568 24714 1 76 0.00190484 270 0 9.87185e+07 0.0500137 4.08648e+06 9.93188e+07 1.02106e+07 24739 4.91425e+07 0 0.134844 0.993956 0.809645 9.87185e+07 0.00278685 2.13898e+07 3.08454e+07 2.13018e+07 301 2.13749e+07 1.33395e+07 0.00234486 2.15284e+07 50.1789 0.0411451 0.996187 0 49.897 GTEX-13VXU-0011-R7b-SM-5SI72 B1, A1 8.3 Brain Brain - Putamen (basal ganglia) 0001874 758 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989933 1.34274e+06 0.940284 0.99284 0.796174 23959 1 76 0.00186625 268 0 9.47779e+07 0.0593573 5.46809e+06 9.54614e+07 1.00177e+07 23976 4.71516e+07 0 0.144111 0.99284 0.790473 9.47779e+07 0.00297099 2.0248e+07 5.11275e+07 2.01839e+07 319 2.01485e+07 9.98646e+06 0.002417 2.05448e+07 50.4869 0.0572806 0.995747 0 49.9207 GTEX-13VXU-0011-R9b-SM-5SI73 B1, A1 8.1 Brain Brain - Spinal cord (cervical c-1) 0006469 758 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.99218 562809 0.954984 0.994367 0.811262 23556 1 76 0.00191769 223 0 7.21689e+07 0.0446632 1.99801e+06 7.25777e+07 6.73351e+06 23577 3.59262e+07 0 0.143722 0.994367 0.806692 7.21689e+07 0.00310032 1.58777e+07 1.52009e+07 1.60401e+07 211 1.59494e+07 1.00541e+07 0.00250771 1.6128e+07 50.2785 0.0275292 0.996554 0 50.2544 GTEX-13VXU-0126-SM-5SI9F 1 B1 6 pieces; well trimmed; 5% intradermal fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 920 626 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988508 208443 0.974343 0.991937 0.795579 24308 1 76 0.00199237 238 0 8.47676e+07 0.0253898 436671 8.54566e+07 9.19221e+06 24341 4.21393e+07 0 0.178764 0.991937 0.789164 8.47676e+07 0.00327595 1.84276e+07 1.03086e+07 1.85377e+07 219 1.85735e+07 1.48193e+07 0.00263194 1.86673e+07 50.1258 0.00510986 0.995366 0 50.1489 GTEX-13VXU-0226-SM-5SI9R 1 B1 2 pieces; 5% fibrous content 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 921 625 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989481 227342 0.976854 0.992589 0.806634 22968 1 76 0.00193564 176 0 7.66161e+07 0.0227519 486877 7.71881e+07 8.26409e+06 22993 3.80883e+07 0 0.17022 0.992589 0.800656 7.66161e+07 0.00319057 1.68755e+07 8.53651e+06 1.69746e+07 195 1.70011e+07 1.31116e+07 0.00256114 1.70761e+07 50.1101 0.00630767 0.995698 0 50.1464 GTEX-13VXU-0326-SM-5LU36 0 B1 2 pieces; <5% internal fat 8.5 Muscle Muscle - Skeletal 0011907 926 620 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99393 269834 0.984232 0.995474 0.873979 20119 1 76 0.00335138 269 0 9.77073e+07 0.0155555 1.45101e+06 9.81515e+07 1.13149e+07 20136 4.86989e+07 0 0.110253 0.995474 0.870024 9.77073e+07 0.00317288 2.14718e+07 9.58736e+06 2.13551e+07 259 2.13918e+07 2.14981e+07 0.00326227 2.15826e+07 50.222 0.0147834 0.997018 0 49.8637 GTEX-13VXU-0326-SM-CYKUJ 0 B1 2 pieces; <5% internal fat 8.5 Muscle Muscle - Skeletal 0011907 926 620 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 RIP-Seq GTEX-13VXU-0426-SM-5LU3I 1 B1 2 pieces; 10% internal & external fat 7.7 Nerve Nerve - Tibial 0001323 931 615 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989609 158436 0.971851 0.991602 0.751527 23599 1 76 0.00384746 146 0 7.10096e+07 0.0278284 192729 7.1611e+07 7.68408e+06 23639 3.53203e+07 0 0.220325 0.991602 0.745215 7.10096e+07 0.00383811 1.57021e+07 7.20503e+06 1.57346e+07 149 1.57462e+07 1.15332e+07 0.00384279 1.58292e+07 50.1315 0.00269133 0.993595 0 50.0517 GTEX-13VXU-0526-SM-5K7V1 1 B1 2 pieces; well trimmed; few very small foci of calcium 8 Blood Vessel Artery - Tibial 0007610 933 613 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986084 173476 0.978868 0.988602 0.855317 21016 1 76 0.00429119 140 0 6.93023e+07 0.0207037 187539 7.01013e+07 4.52149e+06 21024 3.44384e+07 0 0.123551 0.988602 0.845567 6.93023e+07 0.00509096 1.49005e+07 5.60986e+06 1.50618e+07 146 1.50862e+07 1.49198e+07 0.00469006 1.50478e+07 49.9363 0.00267526 0.991119 0 50.2693 GTEX-13VXU-0626-SM-5L3F9 1 B1 6 pieces; up to 2 hairs per piece 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 966 580 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.98585 374591 0.966679 0.990368 0.755679 23120 1 76 0.00321576 129 0 5.89988e+07 0.0330887 177506 5.95727e+07 5.81437e+06 23152 2.92725e+07 0 0.211 0.990368 0.7484 5.89988e+07 0.00444967 1.29264e+07 9.67782e+06 1.29156e+07 130 1.29933e+07 9.80615e+06 0.0038299 1.31023e+07 50.2087 0.00297966 0.994885 0 49.9792 GTEX-13VXU-0726-SM-5J2O7 1 B1 2 pieces; active spermatogenesis 6.4 Testis Testis 0000473 969 577 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983328 248284 0.921661 0.987363 0.71925 33094 1 76 0.00441698 137 0 7.50348e+07 0.0780035 476722 7.59951e+07 4.18225e+06 33162 3.72477e+07 0 0.20241 0.987363 0.710161 7.50348e+07 0.00600466 1.53922e+07 1.10683e+07 1.54929e+07 132 1.56063e+07 1.25627e+07 0.00520757 1.55457e+07 49.9028 0.00627306 0.991399 0 50.163 GTEX-13VXU-0826-SM-5KLZ2 1 B1 2 pieces 7.6 Thyroid Thyroid 0002046 976 570 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.987468 159229 0.970838 0.989744 0.802461 24032 1 76 0.00375112 169 0 8.53911e+07 0.0288283 193196 8.6276e+07 4.05442e+06 24065 4.24525e+07 0 0.168377 0.989744 0.794231 8.53911e+07 0.00484566 1.87725e+07 7.44491e+06 1.88983e+07 185 1.89511e+07 1.58859e+07 0.00429713 1.89067e+07 49.9414 0.00223928 0.992019 0 50.167 GTEX-13VXU-0926-SM-5IFFH 1 B1 2 pieces 6.1 Liver Liver 0001114 978 568 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.986791 277640 0.968869 0.99119 0.819804 20792 1 76 0.00214754 140 0 6.14146e+07 0.0310219 1.62635e+06 6.19605e+07 6.80583e+06 20807 3.04759e+07 0 0.149066 0.99119 0.812581 6.14146e+07 0.00416538 1.35144e+07 1.00532e+07 1.33283e+07 173 1.33135e+07 7.75503e+06 0.00315198 1.37772e+07 50.8559 0.0262482 0.995589 0 49.6534 GTEX-13VXU-1026-SM-5KLZE 1 B1 2 pieces 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 982 564 BP-47125 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.982935 241387 0.975558 0.98564 0.803547 25053 1 76 0.00396618 378 0 1.18347e+08 0.0241011 751813 1.20071e+08 6.16251e+06 25090 5.87234e+07 0 0.172011 0.98564 0.792008 1.18347e+08 0.00530395 2.60475e+07 1.38382e+07 2.62169e+07 369 2.62511e+07 1.84049e+07 0.00463323 2.63268e+07 50.072 0.00626141 0.988346 0 50.1621 GTEX-13VXU-1126-SM-5LU3U 1 B1 6 pieces; up to 10% fat 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 997 549 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989957 238508 0.968074 0.992379 0.785996 23414 1 76 0.00388855 162 0 7.84242e+07 0.0317124 1.76643e+06 7.90264e+07 8.77923e+06 23434 3.8997e+07 0 0.182078 0.992379 0.780006 7.84242e+07 0.00406827 1.72453e+07 8.08115e+06 1.71931e+07 197 1.71846e+07 1.01648e+07 0.00397819 1.74362e+07 50.3633 0.0223524 0.994802 0 49.9242 GTEX-13VXU-1926-SM-5LU5J 1 B1 2 pieces; heavily calcified atheromatous plaque in 1 piece; other piece appears atheromatous without calcium 6.1 Blood Vessel Artery - Coronary 0001621 1018 528 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.984703 171389 0.969131 0.987102 0.754989 23881 1 76 0.00401751 152 0 7.9867e+07 0.0305143 371485 8.09106e+07 9.56359e+06 23917 3.96904e+07 0 0.214142 0.987102 0.745251 7.9867e+07 0.00405475 1.72852e+07 8.02011e+06 1.73352e+07 166 1.73493e+07 1.29199e+07 0.00403608 1.74574e+07 50.1553 0.0045913 0.9895 0 50.0721 GTEX-13VXU-2726-SM-5LU4N 1 B1 2 pieces; atelectasis with patchy emphysema 6 Lung Lung 0008952 1058 488 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989661 258082 0.971589 0.991821 0.719876 23122 1 76 0.00414801 136 0 7.84252e+07 0.0281 443988 7.90719e+07 8.6205e+06 23159 3.89853e+07 0 0.251713 0.991821 0.713988 7.84252e+07 0.00415936 1.73425e+07 7.32229e+06 1.73295e+07 162 1.73513e+07 1.06107e+07 0.00415367 1.74845e+07 50.1913 0.00561499 0.993981 0 49.9813 GTEX-13VXU-2726-SM-CYKUK 1 B1 2 pieces; atelectasis with patchy emphysema 6 Lung Lung 0008952 1058 488 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 RIP-Seq GTEX-13VXU-2826-SM-664MA 1 B1 2 pieces; ducts in fibrous stroma with 60 & 80% fat 6.3 Breast Breast - Mammary Tissue 0008367 1062 484 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.988331 204107 0.977845 0.988696 0.859646 22914 1 76 0.00237752 277 0 9.40196e+07 0.0217275 493855 9.50946e+07 6.76951e+06 22927 4.67037e+07 0 0.1182 0.988696 0.849928 9.40196e+07 0.00349094 2.07342e+07 9.59739e+06 2.07455e+07 271 2.06697e+07 1.7642e+07 0.00293402 2.0853e+07 50.2207 0.0051933 0.989061 0 50.0137 GTEX-13VXU-2926-SM-5LU5C 1 B1 2 partly fragmented pieces 6 Brain Brain - Cortex 0001870 1132 414 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992886 285429 0.962889 0.994649 0.823334 23827 1 76 0.00371978 198 0 7.66983e+07 0.0367552 2.8862e+06 7.71109e+07 9.79119e+06 23842 3.81995e+07 0 0.139555 0.994649 0.818929 7.66983e+07 0.00362522 1.6922e+07 1.31855e+07 1.68964e+07 238 1.68986e+07 9.3335e+06 0.00367259 1.70485e+07 50.2207 0.0374292 0.996411 0 49.962 GTEX-13VXU-3026-SM-5LU3K 1 B1 2 pieces 6 Brain Brain - Cerebellum 0002037 1136 410 BP-47524 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.989814 799720 0.926542 0.991757 0.698184 23679 1 76 0.00411341 130 0 7.57879e+07 0.0730572 1.17376e+06 7.64178e+07 9.36652e+06 23703 3.77024e+07 0 0.228358 0.991757 0.692429 7.57879e+07 0.00408158 1.60567e+07 3.35831e+07 1.6132e+07 157 1.61617e+07 9.00935e+06 0.00409753 1.61805e+07 50.029 0.0153598 0.993701 0 50.117 GTEX-13VXU-3126-SM-5SIA4 1 B1 1 piece; mostly anterior; posterior labeled 6.8 Pituitary Pituitary 0000007 1143 403 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991443 319051 0.959376 0.993563 0.775626 25504 1 76 0.00195911 204 0 8.74467e+07 0.0403501 376098 8.80133e+07 8.23547e+06 25536 4.3534e+07 0 0.18375 0.993563 0.770633 8.74467e+07 0.00306215 1.81851e+07 1.30627e+07 1.83336e+07 242 1.83447e+07 1.44872e+07 0.00250946 1.83461e+07 50.0018 0.0042732 0.995681 0 50.2032 GTEX-13W3W-0004-SM-5GYAC B1 Blood Whole Blood 0013756 -1 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13W3W-0004-SM-5HJPI B1 Blood Whole Blood 0013756 -1 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13W3W-0004-SM-6WSCQ B1 Blood Whole Blood 0013756 -1 BP-45382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/01/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13W3W-0005-SM-5SI9Y B1 9.1 Blood Whole Blood 0013756 -1 BP-45386 RNA isolation_PAXgene Blood RNA (Manual) 11/01/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990692 1.8115e+06 0.921883 0.992893 0.758183 19055 1 76 0.00212341 134 0 7.6402e+07 0.0777777 242446 7.69488e+07 8.09833e+06 19067 3.80333e+07 0 0.1637 0.992893 0.752795 7.6402e+07 0.003261 1.59295e+07 5.37354e+07 1.60579e+07 152 1.6075e+07 1.41686e+07 0.00269095 1.61238e+07 50.0759 0.00315074 0.995094 0 50.2008 GTEX-13W3W-0226-SM-731ET 1 B1 6 pieces, minimal atherosis, up to 2mm attached serosa/fat, rep delineated 7.8 Blood Vessel Artery - Aorta 0001496 181 1346 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990342 304872 0.972226 0.992238 0.818199 21123 1 76 0.00331256 118 0 5.50094e+07 0.0274193 110329 5.54397e+07 7.11754e+06 21137 2.73368e+07 0 0.154028 0.992238 0.811848 5.50094e+07 0.00385644 1.19465e+07 4.80115e+06 1.19905e+07 126 1.2034e+07 1.01019e+07 0.00358398 1.20028e+07 49.935 0.00199007 0.994133 0 50.0918 GTEX-13W3W-0326-SM-731DS 1 B1 2 pieces, minimal congestion; well preserved bronchial mucosa delineated 7.5 Lung Lung 0008952 186 1341 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990584 168555 0.967829 0.992233 0.764283 23822 1 76 0.00350233 123 0 6.07567e+07 0.0318414 245614 6.12323e+07 7.23249e+06 23851 3.02348e+07 0 0.203546 0.992233 0.758347 6.07567e+07 0.003953 1.33612e+07 5.41301e+06 1.34494e+07 132 1.34468e+07 9.65551e+06 0.00372729 1.34582e+07 50.0212 0.00401118 0.993881 0 50.1644 GTEX-13W3W-0426-SM-5SI9D 1 B1 2 pieces, minimal fibrosis 8.4 Heart Heart - Left Ventricle 0006566 189 1338 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991439 239377 0.979653 0.99417 0.854062 21961 1 76 0.00196466 270 0 9.52892e+07 0.0200732 1.42448e+06 9.5848e+07 9.85891e+06 21975 4.74365e+07 0 0.125592 0.99417 0.849082 9.52892e+07 0.0029134 2.08412e+07 1.61272e+07 2.07486e+07 273 2.06692e+07 1.68519e+07 0.00243773 2.11575e+07 50.5837 0.0148619 0.996902 0 49.8887 GTEX-13W3W-0526-SM-5LU3X 1 B1 2 pieces, no abnormalities 8.3 Heart Heart - Atrial Appendage 0006631 190 1337 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993904 170443 0.978868 0.995432 0.83881 21044 1 76 0.0038508 152 0 7.40596e+07 0.0209272 1.25116e+06 7.43995e+07 9.55025e+06 21057 3.69121e+07 0 0.140058 0.995432 0.834979 7.40596e+07 0.00356755 1.60873e+07 1.50449e+07 1.61182e+07 189 1.59514e+07 1.1477e+07 0.0037094 1.635e+07 50.617 0.0168167 0.99696 0 50.0479 GTEX-13W3W-0626-SM-5LU45 1 B1 2 pieces up to 1.5mm adherent fat, both sections; minimal atherosis 8.5 Blood Vessel Artery - Coronary 0001621 192 1335 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99262 224848 0.976116 0.994456 0.834817 22309 1 76 0.00366086 140 0 6.90887e+07 0.0236105 184657 6.94738e+07 8.11372e+06 22328 3.4409e+07 0 0.141298 0.994456 0.830189 6.90887e+07 0.003557 1.52432e+07 5.64749e+06 1.53031e+07 152 1.53025e+07 1.31525e+07 0.00360902 1.53669e+07 50.1049 0.00265794 0.996293 0 50.0979 GTEX-13W3W-0726-SM-5IJDQ 0 B1 6 pieces, no significant dermal fat; squmous epithelium is ~45 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 196 1331 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987879 197350 0.968541 0.991345 0.764403 23491 1 76 0.00233402 174 0 7.55768e+07 0.0313187 862703 7.62366e+07 1.00777e+07 23517 3.75484e+07 0 0.204138 0.991345 0.757787 7.55768e+07 0.00412297 1.66894e+07 9.77995e+06 1.66632e+07 180 1.66144e+07 1.07006e+07 0.00322537 1.69947e+07 50.5658 0.0113161 0.994811 0 49.9606 GTEX-13W3W-1026-SM-5IFG4 1 B1 2 pieces, well preserved; Islets well-visualized. Good specimens 6.8 Pancreas Pancreas 0001150 208 1319 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4813 03/05/2014 TruSeq.v1 RNASEQ 0.989694 213824 0.970948 0.99268 0.829332 20886 1 76 0.00248427 107 0 6.20436e+07 0.0288785 187510 6.25011e+07 6.94371e+06 20901 3.08658e+07 0 0.141616 0.99268 0.823261 6.20436e+07 0.00412416 1.40419e+07 1.6569e+07 1.42706e+07 107 1.42567e+07 1.61267e+07 0.00330175 1.42392e+07 49.9691 0.00300011 0.995667 0 50.4037 GTEX-13W3W-1126-SM-5L3DO 1 B1 2 pieces, mainly fat; focal vascular tissue, delineated 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 216 1311 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988596 149264 0.976186 0.992469 0.833272 22149 1 76 0.00316658 158 0 7.03152e+07 0.0235915 492178 7.08488e+07 7.51997e+06 22171 3.49549e+07 0 0.142914 0.992469 0.826996 7.03152e+07 0.00411492 1.54549e+07 8.22671e+06 1.55267e+07 174 1.55249e+07 1.09186e+07 0.0036389 1.57011e+07 50.2822 0.00694688 0.996342 0 50.1158 GTEX-13W3W-1226-SM-5LU4H 1 B1 2 pieces, no abnormalities; a few TDLUs noted; rep delineated 7.7 Breast Breast - Mammary Tissue 0008367 222 1305 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992736 129824 0.970655 0.994452 0.787598 23448 1 76 0.00384556 121 0 5.85718e+07 0.0289808 196161 5.88985e+07 6.79756e+06 23470 2.91728e+07 0 0.183057 0.994452 0.783229 5.85718e+07 0.00376817 1.2909e+07 5.54386e+06 1.29662e+07 126 1.29547e+07 9.95043e+06 0.00380693 1.3019e+07 50.1238 0.00333049 0.996168 0 50.1106 GTEX-13W3W-1326-SM-5LU4T 1 B1 2 pieces, ~70% cortex(delineated), rest is fat 9.1 Adrenal Gland Adrenal Gland 0002369 226 1301 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993188 129134 0.977596 0.994976 0.832966 21762 1 76 0.00380941 129 0 6.40554e+07 0.0220878 678868 6.43789e+07 8.28501e+06 21778 3.1912e+07 0 0.144629 0.994976 0.828781 6.40554e+07 0.00359574 1.42598e+07 7.16130e+06 1.42178e+07 142 1.42189e+07 1.11616e+07 0.00370276 1.43671e+07 50.2592 0.0105449 0.996763 0 49.9262 GTEX-13W3W-1426-SM-5LU56 1 B1 2 pieces, peripheral myometrium, prominent vessels 7.9 Uterus Uterus 0000995 232 1295 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992065 235895 0.97385 0.993983 0.807926 22255 1 76 0.0037473 141 0 6.95509e+07 0.0258326 155904 6.9972e+07 8.39132e+06 22281 3.46227e+07 0 0.165924 0.993983 0.803065 6.95509e+07 0.00361028 1.51347e+07 5.55019e+06 1.5232e+07 150 1.52155e+07 1.24129e+07 0.00367892 1.52828e+07 50.1103 0.00222809 0.995901 0 50.1601 GTEX-13W3W-1526-SM-5LU5I 1 B1 2 pieces, typical post menopausal atrophy 7.7 Ovary Ovary 0000992 235 1292 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991991 412739 0.966688 0.99384 0.734469 23262 1 76 0.00374981 145 0 8.04448e+07 0.0330285 87272 8.09434e+07 9.44198e+06 23301 4.00555e+07 0 0.232219 0.99384 0.729945 8.04448e+07 0.00355534 1.7711e+07 1.42918e+07 1.77711e+07 159 1.78e+07 1.34495e+07 0.00365276 1.78313e+07 50.0439 0.00107819 0.995689 0 50.0847 GTEX-13W3W-1626-SM-5LU35 1 B1 6 pieces, squamous mucosa up to ~ 0.3mm, ~10% thickness. Submucosal mucus glands present; rep delineated 9 Esophagus Esophagus - Mucosa 0006920 250 1277 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993007 175961 0.974532 0.994578 0.798236 23521 1 76 0.00380931 211 0 9.32551e+07 0.0251335 417986 9.37635e+07 1.17704e+07 23552 4.64625e+07 0 0.176296 0.994578 0.793907 9.32551e+07 0.00358297 2.09048e+07 1.15023e+07 2.0954e+07 227 2.09369e+07 1.70867e+07 0.00369632 2.10653e+07 50.1528 0.00445787 0.996148 0 50.0589 GTEX-13W3W-1726-SM-5LU4A 1 B1 6 pieces, all muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 251 1276 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991793 209810 0.974395 0.993789 0.821297 21879 1 76 0.00380811 153 0 7.39403e+07 0.0253798 444951 7.44025e+07 9.31986e+06 21900 3.68128e+07 0 0.153098 0.993789 0.816196 7.39403e+07 0.00381196 1.6011e+07 6.60465e+06 1.60758e+07 167 1.60368e+07 1.22284e+07 0.00381003 1.61949e+07 50.2452 0.00598033 0.995784 0 50.101 GTEX-13W3W-1826-SM-5IJDE 1 B1 6 pieces, all muscularis 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 253 1274 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.989587 178641 0.969409 0.992242 0.778223 22570 1 76 0.00229277 138 0 6.61067e+07 0.0303678 295727 6.66236e+07 8.71425e+06 22596 3.2881e+07 0 0.191186 0.992242 0.772186 6.61067e+07 0.00381705 1.42898e+07 6.42834e+06 1.43549e+07 148 1.43153e+07 1.05354e+07 0.00305287 1.44979e+07 50.3169 0.00443877 0.994898 0 50.1136 GTEX-13W3W-2026-SM-5K7UL 1 B1 6 pieces, well preserved; lymphoid aggreates/Peter patches are ~20% total 7 Small Intestine Small Intestine - Terminal Ileum 0001211 265 1262 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986152 200071 0.97581 0.988751 0.838328 22847 1 76 0.00438285 148 0 7.60517e+07 0.0239271 324879 7.69169e+07 5.07352e+06 22865 3.78004e+07 0 0.137483 0.988751 0.828898 7.60517e+07 0.00511455 1.67637e+07 7.07374e+06 1.69237e+07 166 1.69144e+07 1.34978e+07 0.00474774 1.69672e+07 50.0778 0.00422377 0.991351 0 50.2375 GTEX-13W3W-2126-SM-5K7UX 1 B1 6 pieces, mucosa is ~5-10% thickness 7 Colon Colon - Transverse 0001157 269 1258 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985623 255257 0.975955 0.98837 0.82804 22830 1 76 0.00441393 145 0 7.4767e+07 0.0238051 277368 7.56467e+07 5.3207e+06 22846 3.71398e+07 0 0.147915 0.98837 0.81841 7.4767e+07 0.00524048 1.64389e+07 6.12914e+06 1.66132e+07 164 1.66033e+07 1.294e+07 0.00482606 1.6649e+07 50.0687 0.00366662 0.991117 0 50.2637 GTEX-13W3W-2226-SM-5LU4M 1 B1 6 pieces, 'contaminant' mucosa is ~10% specimenmen 7.3 Colon Colon - Sigmoid 0001159 272 1255 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990801 223645 0.971054 0.992736 0.792763 23527 1 76 0.00414658 140 0 6.64872e+07 0.0279269 505572 6.69737e+07 7.98439e+06 23555 3.30697e+07 0 0.178292 0.992736 0.787004 6.64872e+07 0.00404736 1.4788e+07 8.51329e+06 1.47881e+07 146 1.47881e+07 1.02287e+07 0.00409707 1.49117e+07 50.2081 0.00754882 0.994671 0 50.0001 GTEX-13W3W-2326-SM-5LU4Y 1 B1 6 pieces, squamous epithelium is ~150 microns 7.1 Vagina Vagina 0000996 274 1253 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990758 235609 0.973384 0.993123 0.800075 23053 1 76 0.00378987 139 0 6.90552e+07 0.0263147 133011 6.95334e+07 7.78382e+06 23074 3.43563e+07 0 0.173309 0.993123 0.794573 6.90552e+07 0.00392657 1.51195e+07 6.02662e+06 1.51431e+07 152 1.51542e+07 1.20346e+07 0.00385806 1.52689e+07 50.1886 0.00191291 0.995487 0 50.0391 GTEX-13W3W-2426-SM-5LU5B 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 497 1030 BP-47486 RNA Extraction from Paxgene-derived Lysate Plate Based 12/17/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991722 260660 0.968842 0.993542 0.770248 25253 1 76 0.00386712 285 0 1.02161e+08 0.0309609 853418 1.02825e+08 1.2221e+07 25290 5.08648e+07 0 0.198594 0.993542 0.765274 1.02161e+08 0.00377002 2.24379e+07 1.12736e+07 2.24713e+07 264 2.24234e+07 1.55169e+07 0.00381866 2.26689e+07 50.2721 0.0082997 0.995363 0 50.0371 GTEX-13W3W-2526-SM-5SI9P 0 B1 2 pieces, minimal fascial tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 497 1030 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992005 184147 0.975414 0.994037 0.812858 23294 1 76 0.00196387 275 0 8.72639e+07 0.0243027 307593 8.77873e+07 8.0621e+06 23321 4.34616e+07 0 0.162556 0.994037 0.808011 8.72639e+07 0.00291144 1.91195e+07 8.99129e+06 1.92378e+07 265 1.92142e+07 1.52528e+07 0.00243669 1.93115e+07 50.1263 0.00350384 0.99607 0 50.1542 GTEX-13W3W-2626-SM-5SIA2 0 B1 2 pieces, ~<5% interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 497 1030 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992551 192497 0.97828 0.994396 0.866658 19794 1 76 0.00195744 202 0 8.15348e+07 0.0215492 1.27623e+06 8.19943e+07 8.11102e+06 19799 4.06293e+07 0 0.111623 0.994396 0.861801 8.15348e+07 0.00300148 1.80878e+07 1.28854e+07 1.80712e+07 255 1.80167e+07 1.47141e+07 0.00247849 1.8275e+07 50.3559 0.0155649 0.99624 0 49.9771 GTEX-13W3W-2726-SM-5SIAE 0 B1 2 pieces, minimal adherent fat, good speciments 6 Nerve Nerve - Tibial 0001323 497 1030 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988132 261620 0.971508 0.992321 0.798962 23483 1 76 0.00188976 214 0 8.27369e+07 0.02826 181849 8.33772e+07 7.78043e+06 23511 4.10978e+07 0 0.172547 0.992321 0.792826 8.27369e+07 0.00314228 1.8113e+07 8.40517e+06 1.82553e+07 219 1.82902e+07 1.37078e+07 0.00251337 1.84165e+07 50.1719 0.00218104 0.99651 0 50.1957 GTEX-13W3W-2826-SM-731E5 0 B1 2 pieces, disrupted sections, minimal atherosis 6.2 Blood Vessel Artery - Tibial 0007610 497 1030 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.989645 130308 0.97608 0.991857 0.842413 21404 1 76 0.00298049 144 0 6.56e+07 0.0235198 311350 6.61386e+07 7.85086e+06 21418 3.26232e+07 0 0.133667 0.991857 0.835553 6.56e+07 0.00359353 1.41925e+07 5.74663e+06 1.42481e+07 152 1.42566e+07 1.30674e+07 0.00328632 1.43184e+07 50.1081 0.00470754 0.994068 0 50.0978 GTEX-13W46-0003-SM-5DU47 C1 Blood Whole Blood 0013756 365 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13W46-0003-SM-5HJPN C1 Blood Whole Blood 0013756 365 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13W46-0003-SM-6WSAK C1 Blood Whole Blood 0013756 365 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13W46-0226-SM-5SIAG 1 C1 6 pieces; ~10% internal/periadnexal fat, 31um thick epidermis 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 493 463 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991198 194377 0.971167 0.993745 0.787889 24190 1 76 0.00195225 194 0 8.10429e+07 0.0286047 574282 8.15531e+07 7.31541e+06 24216 4.03333e+07 0 0.183278 0.993745 0.782961 8.10429e+07 0.00313992 1.7656e+07 8.19106e+06 1.7788e+07 199 1.77799e+07 1.37922e+07 0.00254457 1.7861e+07 50.1138 0.00704182 0.996291 0 50.1862 GTEX-13W46-0526-SM-5IJBD 1 C1 2 pieces; well trimmed with minimal external fat 6.7 Nerve Nerve - Tibial 0001323 527 430 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.987826 242489 0.96802 0.990999 0.752421 23964 1 76 0.00231706 173 0 7.59006e+07 0.031715 222020 7.65899e+07 1.02948e+07 23992 3.7706e+07 0 0.215598 0.990999 0.745649 7.59006e+07 0.00415627 1.66383e+07 7.72376e+06 1.67372e+07 171 1.67327e+07 1.18231e+07 0.00323372 1.68757e+07 50.2128 0.00289881 0.994172 0 50.1483 GTEX-13W46-0626-SM-5LU3N 1 C1 2 pieces; well trimmed with medial calcification in one section 6.9 Blood Vessel Artery - Tibial 0007610 528 430 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992001 179695 0.970466 0.993598 0.784253 22755 1 76 0.00387067 218 0 9.47466e+07 0.0291172 360213 9.5357e+07 1.12207e+07 22786 4.71627e+07 0 0.186212 0.993598 0.779233 9.47466e+07 0.00358926 2.04229e+07 7.65677e+06 2.04805e+07 234 2.04837e+07 1.68609e+07 0.00373019 2.05649e+07 50.0989 0.00377752 0.995196 0 50.0704 GTEX-13W46-0726-SM-5LU3Z 1 C1 2 pieces; some atrophy, 5-10% internal fat 7.7 Muscle Muscle - Skeletal 0011907 544 414 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99381 148763 0.978594 0.995357 0.854713 20820 1 76 0.00354745 164 0 7.39996e+07 0.0211559 1.05377e+06 7.43447e+07 8.87164e+06 20836 3.68801e+07 0 0.12388 0.995357 0.850745 7.39996e+07 0.00336042 1.62119e+07 7.24678e+06 1.62002e+07 166 1.6218e+07 1.51073e+07 0.00345408 1.6302e+07 50.1292 0.0141741 0.996904 0 49.982 GTEX-13W46-0826-SM-5LU3H 1 C1 2 pieces; fibroadipose tissue, no ductal elements 6.7 Breast Breast - Mammary Tissue 0008367 556 402 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991081 300507 0.977812 0.992942 0.805632 23637 1 76 0.00372495 279 0 1.09001e+08 0.0218368 510062 1.09775e+08 1.32664e+07 23664 5.42691e+07 0 0.17218 0.992942 0.799946 1.09001e+08 0.00371156 2.40958e+07 1.4356e+07 2.42163e+07 309 2.4227e+07 1.9428e+07 0.00371826 2.42903e+07 50.0653 0.00464641 0.994804 0 50.1248 GTEX-13W46-0926-SM-5LU3T 2 C1 2 pieces; some interstitial fibrosis 6.1 Thyroid Thyroid 0002046 560 399 BP-47141 RNA Extraction from Paxgene-derived Lysate Plate Based 12/13/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.988984 262122 0.956534 0.991132 0.716032 24762 1 76 0.00398078 152 0 8.02896e+07 0.0432333 533872 8.1008e+07 9.42371e+06 24796 3.99389e+07 0 0.240502 0.991132 0.709682 8.02896e+07 0.00403307 1.73591e+07 1.00763e+07 1.74301e+07 168 1.7441e+07 1.03774e+07 0.00400687 1.75167e+07 50.1082 0.00659036 0.99328 0 50.1021 GTEX-13W46-1226-SM-5SIAS 1 C1 2 pieces; fat with dispersed small amounts of fibrovascular tissue 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 570 391 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988588 239131 0.975121 0.992353 0.794334 23501 1 76 0.00193905 173 0 8.44058e+07 0.0245403 476259 8.50562e+07 8.20469e+06 23529 4.19395e+07 0 0.180787 0.992353 0.78826 8.44058e+07 0.00311054 1.85399e+07 1.15786e+07 1.86936e+07 199 1.87533e+07 1.59362e+07 0.00252257 1.87907e+07 50.0498 0.00559934 0.996118 0 50.2065 GTEX-13W46-1826-SM-5K7VA 1 C1 6 pieces; atherosclerosis 6.9 Blood Vessel Artery - Aorta 0001496 583 381 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.982886 186037 0.974686 0.985442 0.780006 21917 1 76 0.00459597 143 0 7.01223e+07 0.0249386 148422 7.11582e+07 4.84019e+06 21937 3.48102e+07 0 0.194681 0.985442 0.76865 7.01223e+07 0.00529522 1.53322e+07 9.62515e+06 1.54411e+07 145 1.54875e+07 1.25722e+07 0.00494469 1.54639e+07 49.9619 0.0020858 0.987998 0 50.1771 GTEX-13W46-1926-SM-5J2MF 2 C1 6 pieces; sloughing of superficial epithelium, rare submucosal glands 6.1 Esophagus Esophagus - Mucosa 0006920 584 381 BP-47070 RNA Extraction from Paxgene-derived Lysate Plate Based 12/12/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.979954 264354 0.968505 0.98376 0.806494 22935 1 76 0.00438237 193 0 8.44472e+07 0.0312842 841237 8.58413e+07 4.82269e+06 22956 4.18555e+07 0 0.162011 0.98376 0.793396 8.44472e+07 0.00629832 1.88267e+07 1.04299e+07 1.89081e+07 212 1.89103e+07 1.0183e+07 0.00533664 1.91348e+07 50.2951 0.00979991 0.987565 0 50.1079 GTEX-13X6H-0001-SM-5DU55 B1 Blood Whole Blood 0013756 -130 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13X6H-0001-SM-5HJR3 B1 Blood Whole Blood 0013756 -130 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13X6H-0001-SM-6WSCM B1 Blood Whole Blood 0013756 -130 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13X6H-0126-SM-5QGOS 1 B1 6 pieces 6.4 Blood Vessel Artery - Aorta 0001496 178 735 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.990479 174709 0.973193 0.993126 0.817713 22087 1 76 0.00174469 142 0 6.37248e+07 0.0265642 461812 6.41659e+07 4.4257e+06 22105 3.16987e+07 0 0.15548 0.993126 0.812092 6.37248e+07 0.00301959 1.39269e+07 6.73855e+06 1.40922e+07 165 1.40092e+07 1.00783e+07 0.00238044 1.41752e+07 50.2945 0.00719715 0.995773 0 50.2948 GTEX-13X6H-0426-SM-5LU4E 1 B1 2 pieces 6.7 Heart Heart - Left Ventricle 0006566 183 730 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.994053 163680 0.983764 0.995528 0.860434 19591 1 76 0.00337141 197 0 7.3737e+07 0.0159776 1.78641e+06 7.40683e+07 7.46647e+06 19602 3.67571e+07 0 0.12333 0.995528 0.856586 7.3737e+07 0.00315236 1.64296e+07 1.32157e+07 1.61531e+07 219 1.61567e+07 1.20618e+07 0.00326205 1.65281e+07 50.5681 0.0241185 0.997002 0 49.5758 GTEX-13X6H-0526-SM-5LU4Q 1 B1 2 pieces; 1 piece has 20% external fat 6.9 Thyroid Thyroid 0002046 186 727 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991954 180998 0.966718 0.993708 0.741428 23278 1 76 0.00371636 133 0 6.84172e+07 0.0330277 244771 6.88503e+07 7.85339e+06 23308 3.40766e+07 0 0.22529 0.993708 0.736763 6.84172e+07 0.0035835 1.50354e+07 6.69665e+06 1.50746e+07 142 1.50631e+07 1.05157e+07 0.00365005 1.51596e+07 50.1596 0.00355512 0.995463 0 50.0651 GTEX-13X6H-0626-SM-5LU53 1 B1 2 pieces; 1 piece has 80% internal and external fat; other has 40%; islets well formed in size and number 7.7 Pancreas Pancreas 0001150 195 718 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992797 194773 0.972875 0.994578 0.83106 22079 1 76 0.00372444 125 0 7.58301e+07 0.0269098 267685 7.62435e+07 9.50696e+06 22098 3.77754e+07 0 0.141815 0.994578 0.826554 7.58301e+07 0.00362744 1.72009e+07 1.32324e+07 1.7325e+07 131 1.73157e+07 1.96019e+07 0.00367603 1.73509e+07 50.0507 0.00351092 0.996359 0 50.1796 GTEX-13X6H-0726-SM-5Q5BX 2 B1 2 pieces 7.4 Spleen Spleen 0002106 196 717 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988695 161366 0.969119 0.99087 0.822515 22519 1 76 0.00226407 141 0 6.4549e+07 0.029841 379552 6.51437e+07 4.72361e+06 22535 3.20854e+07 0 0.146605 0.99087 0.815005 6.4549e+07 0.00333306 1.42517e+07 8.26138e+06 1.42906e+07 156 1.42755e+07 1.14107e+07 0.00279739 1.44074e+07 50.23 0.00582638 0.993045 0 50.0681 GTEX-13X6H-0926-SM-5SIB2 1 B1 6 pieces; excessive subcutaneous fat, up to 2mm thick plus thin fatty dermis 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 208 705 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990338 184515 0.974533 0.992878 0.800074 22685 1 76 0.00186542 180 0 7.25117e+07 0.0252403 337800 7.30318e+07 7.38354e+06 22708 3.60881e+07 0 0.174459 0.992878 0.794376 7.25117e+07 0.00295213 1.60047e+07 8.22106e+06 1.60754e+07 176 1.60754e+07 1.29028e+07 0.00240739 1.6186e+07 50.1715 0.00462538 0.995418 0 50.1102 GTEX-13X6H-1026-SM-5SIBE 1 B1 2 pieces; atrophic with corpora albicantia occupying 40 & 20% 8.6 Ovary Ovary 0000992 218 695 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991955 210296 0.973089 0.99437 0.802877 22334 1 76 0.00174015 170 0 7.37494e+07 0.0266545 95436 7.4167e+07 7.71763e+06 22362 3.67197e+07 0 0.170212 0.99437 0.798357 7.37494e+07 0.00265339 1.62426e+07 9.82274e+06 1.63781e+07 168 1.63935e+07 1.54482e+07 0.00219566 1.63992e+07 50.0087 0.00128677 0.996785 0 50.2076 GTEX-13X6H-1326-SM-5LU42 1 B1 6 pieces; well preserved 8.3 Esophagus Esophagus - Mucosa 0006920 228 685 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991191 226640 0.978269 0.993056 0.848831 21995 1 76 0.00366084 173 0 8.48537e+07 0.0214649 758154 8.5447e+07 1.07212e+07 22013 4.22714e+07 0 0.129438 0.993056 0.842937 8.48537e+07 0.00358258 1.92153e+07 1.21744e+07 1.92472e+07 187 1.9274e+07 1.85072e+07 0.00362178 1.93494e+07 50.0976 0.0088728 0.994922 0 50.0414 GTEX-13X6H-1426-SM-5SI91 1 B1 6 pieces; excessive fibrofatty tissue up to 2 mm thick 7.1 Esophagus Esophagus - Muscularis 0004648 233 680 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990027 150376 0.978719 0.993343 0.879982 20619 1 76 0.00163813 215 0 7.91091e+07 0.0209664 814461 7.96392e+07 8.03788e+06 20627 3.93434e+07 0 0.098737 0.993343 0.874124 7.91091e+07 0.00285363 1.69804e+07 7.79354e+06 1.70643e+07 214 1.70475e+07 1.65147e+07 0.00224385 1.72429e+07 50.2849 0.0102269 0.996659 0 50.1233 GTEX-13X6H-1526-SM-5Q5E2 1 B1 6 pieces; mainly muscle 9 Esophagus Esophagus - Gastroesophageal Junction 0004550 235 678 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.992083 132786 0.982071 0.994509 0.886125 19505 1 76 0.00185711 138 0 5.56669e+07 0.0176046 459832 5.59742e+07 8.03155e+06 19511 2.76975e+07 0 0.0959453 0.994509 0.88126 5.56669e+07 0.0032433 1.20489e+07 4.95004e+06 1.2078e+07 139 1.20427e+07 1.18037e+07 0.00254852 1.22152e+07 50.3554 0.00821507 0.996936 0 50.0605 GTEX-13X6H-1626-SM-5Q5CT 1 B1 6 pieces; muscularis propria only, no mucosa 8.6 Stomach Stomach 0000945 237 676 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989429 146724 0.980953 0.991903 0.873457 21704 1 76 0.00184236 218 0 8.60339e+07 0.018753 413769 8.67363e+07 1.06872e+07 21713 4.28126e+07 0 0.107496 0.991903 0.866384 8.60339e+07 0.00345469 1.89116e+07 7.92037e+06 1.90054e+07 232 1.89458e+07 1.80694e+07 0.00264652 1.91818e+07 50.3095 0.00477043 0.994377 0 50.1236 GTEX-13X6H-1726-SM-5Q5EH 1 B1 2 pieces 8.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 241 672 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991114 175279 0.983786 0.994052 0.885779 21461 1 76 0.00192459 180 0 8.05841e+07 0.0159236 363861 8.10663e+07 1.14811e+07 21472 4.00897e+07 0 0.0980081 0.994052 0.88051 8.05841e+07 0.00336213 1.76811e+07 9.11748e+06 1.78703e+07 196 1.78174e+07 1.94959e+07 0.00264123 1.79666e+07 50.2084 0.00448844 0.996991 0 50.2661 GTEX-13X6H-1826-SM-7EWCZ 1 B1 6 pieces; lymphoid tissue in several pieces [circled]; muscularis propria included in 5 8.8 Small Intestine Small Intestine - Terminal Ileum 0001211 243 670 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99107 114867 0.974538 0.992774 0.806913 22898 1 76 0.00235185 151 0 6.52815e+07 0.0248966 543196 6.57566e+07 5.59403e+06 22923 3.25141e+07 0 0.167625 0.992774 0.801082 6.52815e+07 0.00323183 1.46128e+07 8.86052e+06 1.46852e+07 151 1.46981e+07 1.17824e+07 0.00279109 1.47035e+07 50.0093 0.00826071 0.994478 0 50.1235 GTEX-13X6H-1926-SM-7EWD3 1 B1 6 pieces; full thickness with some mucosal defects 8.7 Colon Colon - Transverse 0001157 258 655 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99173 123824 0.97809 0.993533 0.85672 22121 1 76 0.00229189 165 0 6.5478e+07 0.0213317 496334 6.59042e+07 5.92816e+06 22136 3.26126e+07 0 0.121371 0.993533 0.85118 6.5478e+07 0.00332949 1.4598e+07 9.01925e+06 1.47416e+07 161 1.47489e+07 1.30711e+07 0.00280975 1.46984e+07 49.9142 0.00753115 0.995337 0 50.2448 GTEX-13X6H-2126-SM-7EWD5 1 B1 6 pieces; excessive subcutaneous fat up to 1.7mm thick 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 399 514 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99187 127135 0.974957 0.993786 0.826093 22303 1 76 0.00229465 168 0 6.43881e+07 0.0247666 302861 6.47907e+07 5.40526e+06 22320 3.20571e+07 0 0.148864 0.993786 0.82096 6.43881e+07 0.00361659 1.41595e+07 6.4341e+06 1.42296e+07 152 1.42602e+07 1.26537e+07 0.00295435 1.42491e+07 49.9807 0.00467445 0.995702 0 50.1234 GTEX-13X6H-2326-SM-7EWEB 1 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 398 515 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993567 99408 0.984165 0.995243 0.894457 18236 1 76 0.00190933 166 0 6.60314e+07 0.0155777 526069 6.63471e+07 5.80508e+06 18238 3.29167e+07 0 0.0897083 0.995243 0.890202 6.60314e+07 0.00281883 1.46389e+07 8.72968e+06 1.48497e+07 169 1.48196e+07 1.45673e+07 0.00236331 1.47705e+07 49.9171 0.00792905 0.996918 0 50.3575 GTEX-13X6H-2526-SM-5QGOT 1 B1 2 pieces; well trimmed; small foci of medial calcification 7.5 Blood Vessel Artery - Tibial 0007610 403 510 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99318 144698 0.978943 0.99421 0.882686 19349 1 76 0.00162459 155 0 6.59839e+07 0.0206782 313144 6.63682e+07 4.58235e+06 19355 3.28469e+07 0 0.0962575 0.99421 0.877575 6.59839e+07 0.00274472 1.40724e+07 6.3633e+06 1.42785e+07 158 1.41361e+07 1.60423e+07 0.00218407 1.42944e+07 50.2783 0.00471828 0.99524 0 50.3636 GTEX-13X6H-5001-SM-AN414 B1 Heart Heart - Left Ventricle 0006566 184 ChIP-Seq GTEX-13X6H-5016-SM-AN415 B1 Muscle Muscle - Skeletal 0011907 406 ChIP-Seq GTEX-13X6I-0002-SM-5DU4A C1 Blood Whole Blood 0013756 664 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13X6I-0002-SM-5HJQC C1 Blood Whole Blood 0013756 664 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-13X6I-0002-SM-6WSAR C1 Blood Whole Blood 0013756 664 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13X6I-0011-R10a-SM-5PNWI C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.994061 763357 0.954268 0.995317 0.840619 23364 1 76 0.00174073 270 0 8.8926e+07 0.0452766 4.14395e+06 8.93444e+07 7.38754e+06 23382 4.43156e+07 0 0.113649 0.995317 0.836683 8.8926e+07 0.0025236 1.92532e+07 2.96307e+07 1.9325e+07 302 1.92179e+07 1.13003e+07 0.00213167 1.94675e+07 50.3226 0.0463818 0.996573 0 50.0932 GTEX-13X6I-0011-R10a-SM-AHZND C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 670 ChIP-Seq GTEX-13X6I-0011-R10a-SM-CYKOE C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 RIP-Seq GTEX-13X6I-0011-R11a-SM-5P9HN C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 670 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991279 679938 0.945146 0.991733 0.762467 24587 1 76 0.00329116 272 0 1.16548e+08 0.054458 2.29736e+06 1.17519e+08 3.9353e+06 24623 5.8044e+07 0 0.18268 0.991733 0.756163 1.16548e+08 0.00346693 2.50991e+07 2.34019e+07 2.52418e+07 310 2.51448e+07 1.37583e+07 0.00337901 2.52495e+07 50.1039 0.0195488 0.992186 0 50.1418 GTEX-13X6I-0011-R1b-SM-5PNZC C1, A1 6.9 Brain Brain - Hippocampus 0001954 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991567 950080 0.951919 0.992464 0.824324 23795 1 76 0.0029337 370 0 9.73984e+07 0.0477956 5.09614e+06 9.8138e+07 2.93734e+06 23816 4.85026e+07 0 0.127596 0.992464 0.818112 9.73984e+07 0.00341105 2.08153e+07 3.42285e+07 2.14519e+07 353 2.12029e+07 9.49957e+06 0.00317216 2.11472e+07 49.9342 0.0519283 0.993361 0 50.753 GTEX-13X6I-0011-R1b-SM-DG7EQ-HP3_A C1, A1 Brain Brain - Hippocampus 0001954 670 DroNc-seq GTEX-13X6I-0011-R1b-SM-DG7EQ-HP3_B C1, A1 Brain Brain - Hippocampus 0001954 670 DroNc-seq GTEX-13X6I-0011-R1b-SM-DG7EQ-HP3_B_united C1, A1 Brain Brain - Hippocampus 0001954 670 DroNc-seq GTEX-13X6I-0011-R2b-SM-5PNWQ C1, A1 8.4 Brain Brain - Substantia nigra 0002038 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992437 428422 0.962382 0.994273 0.835305 22171 1 76 0.00180027 161 0 6.11071e+07 0.0373567 3.66269e+06 6.14590e+07 5.73947e+06 22181 3.0434e+07 0 0.127077 0.994273 0.830521 6.11071e+07 0.0028466 1.34278e+07 1.62132e+07 1.35499e+07 188 1.34031e+07 6.90365e+06 0.00232247 1.36824e+07 50.5156 0.0595957 0.996109 0 50.2263 GTEX-13X6I-0011-R3b-SM-5P9HM C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 670 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993308 1.08911e+06 0.950942 0.993835 0.827692 24280 1 76 0.00293878 271 0 1.09458e+08 0.0486807 6.39138e+06 1.10137e+08 3.41816e+06 24305 5.4549e+07 0 0.12325 0.993835 0.822589 1.09458e+08 0.00322375 2.36549e+07 4.04461e+07 2.38926e+07 321 2.36714e+07 1.26251e+07 0.00308119 2.39464e+07 50.2888 0.0580311 0.994362 0 50.25 GTEX-13X6I-0011-R4b-SM-5PNU9 C1, A1 7.8 Brain Brain - Amygdala 0001876 670 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993034 594393 0.956125 0.994769 0.822873 22991 1 76 0.0018112 201 0 7.14239e+07 0.043558 4.20773e+06 7.17994e+07 5.96185e+06 23009 3.55721e+07 0 0.133253 0.994769 0.818568 7.14239e+07 0.00292486 1.54996e+07 2.06768e+07 1.57389e+07 241 1.55934e+07 8.07198e+06 0.00236706 1.57724e+07 50.2852 0.0586039 0.996505 0 50.383 GTEX-13X6I-0011-R5a-SM-5PNWW C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 670 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99214 882500 0.951259 0.992893 0.803275 24650 1 76 0.00299866 268 0 9.01244e+07 0.0483576 3.96185e+06 9.07695e+07 2.55849e+06 24670 4.48774e+07 0 0.147984 0.992893 0.797566 9.01244e+07 0.00347371 1.94863e+07 2.60557e+07 1.97518e+07 292 1.9624e+07 1.10277e+07 0.003236 1.97005e+07 50.0973 0.0436474 0.993647 0 50.3383 GTEX-13X6I-0011-R7b-SM-5PNWP C1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990613 574356 0.956495 0.992235 0.817834 23174 1 76 0.00184442 198 0 7.23874e+07 0.0431757 3.81078e+06 7.29538e+07 6.74036e+06 23189 3.6061e+07 0 0.138661 0.992235 0.811483 7.23874e+07 0.00277032 1.57194e+07 2.11771e+07 1.57876e+07 249 1.56967e+07 8.45407e+06 0.00230662 1.59262e+07 50.3629 0.0522355 0.993858 0 50.1083 GTEX-13X6I-0011-R8a-SM-5PNZF C1, A1 6.7 Brain Brain - Hypothalamus 0001898 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992419 861601 0.957277 0.993274 0.842044 24184 1 76 0.00292548 373 0 1.09059e+08 0.0424275 5.64014e+06 1.09798e+08 3.1602e+06 24204 5.43285e+07 0 0.115232 0.993274 0.836381 1.09059e+08 0.00339449 2.3683e+07 3.23696e+07 2.42064e+07 358 2.39387e+07 1.19239e+07 0.00315978 2.40406e+07 50.1062 0.0513685 0.994129 0 50.5464 GTEX-13X6I-0011-R9b-SM-5PNZJ C1, A1 8.3 Brain Brain - Spinal cord (cervical c-1) 0006469 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989546 888057 0.951252 0.990281 0.820228 24008 1 76 0.00298701 379 0 1.10507e+08 0.0485442 6.74993e+06 1.11591e+08 3.57701e+06 24028 5.49862e+07 0 0.131024 0.990281 0.812256 1.10507e+08 0.00360392 2.39347e+07 2.89939e+07 2.47165e+07 389 2.42776e+07 1.06118e+07 0.00329523 2.44532e+07 50.1802 0.060488 0.991016 0 50.8035 GTEX-13X6I-0526-SM-5QGP8 1 C1 2 pieces; atrophy, includes 30 and 40% fat/tendon 7.1 Muscle Muscle - Skeletal 0011907 805 1343 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993654 161480 0.978085 0.994809 0.82969 20944 1 76 0.00170327 149 0 6.2283e+07 0.0216835 655552 6.2608e+07 4.00994e+06 20960 3.10387e+07 0 0.148395 0.994809 0.825383 6.2283e+07 0.00267248 1.36561e+07 6.85412e+06 1.37821e+07 159 1.37222e+07 1.10334e+07 0.00218731 1.3787e+07 50.1177 0.0104707 0.995964 0 50.2296 GTEX-13X6I-0626-SM-5QGP9 1 C1 6 pieces; well trimmed, epidermis measures 30 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 807 1342 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993997 179418 0.971978 0.995018 0.777554 22893 1 76 0.00184092 142 0 6.13305e+07 0.0277984 250411 6.16376e+07 3.89486e+06 22917 3.05549e+07 0 0.194425 0.995018 0.77368 6.13305e+07 0.00275036 1.3436e+07 5.86652e+06 1.35087e+07 145 1.34561e+07 1.06619e+07 0.00229517 1.35542e+07 50.1817 0.00406264 0.996039 0 50.1349 GTEX-13X6I-0926-SM-5LUAB 1 C1 6 pieces; atherosclerosis 5.7 Blood Vessel Artery - Aorta 0001496 813 1337 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989722 241709 0.976783 0.991973 0.792925 22068 1 76 0.004695 127 0 6.29059e+07 0.0228367 139874 6.3415e+07 5.74029e+06 22087 3.1256e+07 0 0.183858 0.991973 0.78656 6.29059e+07 0.00399562 1.36208e+07 6.31277e+06 1.3697e+07 133 1.37095e+07 1.14411e+07 0.0043461 1.37484e+07 50.0709 0.00220569 0.994223 0 50.1394 GTEX-13X6I-1026-SM-5LU4C 1 C1 6 pieces; epithelium discontinuous in some pieces 6.8 Esophagus Esophagus - Mucosa 0006920 815 1336 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992734 161166 0.973588 0.994381 0.792014 23438 1 76 0.0037655 130 0 6.87607e+07 0.0261426 131795 6.91493e+07 8.00087e+06 23462 3.42452e+07 0 0.181574 0.994381 0.787564 6.87607e+07 0.00354976 1.52622e+07 7.94592e+06 1.53108e+07 143 1.52975e+07 1.26115e+07 0.00365781 1.53889e+07 50.1489 0.00190595 0.996028 0 50.0796 GTEX-13X6I-1426-SM-5SI9Z 1 C1 2 pieces 6.8 Heart Heart - Left Ventricle 0006566 824 1330 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990518 198580 0.977969 0.9932 0.827387 21749 1 76 0.00182038 265 0 7.73813e+07 0.0219018 3.78574e+06 7.79111e+07 7.85428e+06 21766 3.85099e+07 0 0.150582 0.9932 0.821761 7.73813e+07 0.00316303 1.72064e+07 1.52645e+07 1.71248e+07 286 1.70933e+07 8.19711e+06 0.00248989 1.74244e+07 50.4796 0.0485905 0.995881 0 49.8811 GTEX-13X6I-1526-SM-5SIAC 0 C1 2 pieces 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 826 1328 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989798 327423 0.973724 0.992864 0.775606 24548 1 76 0.0020033 209 0 9.36939e+07 0.0259365 196175 9.43674e+07 1.00303e+07 24589 4.65951e+07 0 0.198118 0.992864 0.77007 9.36939e+07 0.00298658 2.06001e+07 1.17482e+07 2.07675e+07 255 2.08252e+07 1.69047e+07 0.00249343 2.08236e+07 49.9981 0.00207884 0.995929 0 50.2023 GTEX-13X6I-1826-SM-5SIAO 1 C1 6 pieces; few sections with residual attached fat up to 20% 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 833 1323 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987984 168478 0.974118 0.991645 0.76871 23304 1 76 0.00197553 176 0 7.23758e+07 0.0256547 407118 7.29856e+07 7.10254e+06 23336 3.59761e+07 0 0.205408 0.991645 0.762288 7.23758e+07 0.00314211 1.5877e+07 8.27723e+06 1.59756e+07 170 1.60133e+07 1.16107e+07 0.00255667 1.60919e+07 50.1225 0.00557806 0.995307 0 50.1547 GTEX-13X6I-2726-SM-5Q5ET 2 C1 6 pieces; some residual submucosa/serosa 5.7 Colon Colon - Sigmoid 0001159 850 1313 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989522 167627 0.972223 0.991985 0.765712 24127 1 76 0.00221003 207 0 8.93241e+07 0.0275558 387703 9.00459e+07 1.24103e+07 24163 4.44119e+07 0 0.206511 0.991985 0.759574 8.93241e+07 0.00362531 1.95352e+07 9.84062e+06 1.9676e+07 254 1.96194e+07 1.23842e+07 0.00291591 1.98043e+07 50.2346 0.00430562 0.994447 0 50.1795 GTEX-13X6I-2926-SM-5Q5C3 2 C1 4 pieces (fragmented); Purkinje cells visualized 7 Brain Brain - Cerebellum 0002037 861 1303 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990142 390041 0.941039 0.992636 0.719634 23382 1 76 0.00202748 130 0 6.56725e+07 0.0586062 856815 6.61597e+07 4.93254e+06 23405 3.26438e+07 0 0.221405 0.992636 0.714335 6.56725e+07 0.00307397 1.40657e+07 1.44323e+07 1.41763e+07 153 1.41762e+07 7.75981e+06 0.00254941 1.42252e+07 50.0862 0.0129507 0.99513 0 50.1958 GTEX-13X6J-0002-SM-5DU4W C1 Blood Whole Blood 0013756 1167 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13X6J-0002-SM-5HJRQ_1 C1 Blood Whole Blood 0013756 1167 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 GTEx_OM25_Jan14_01_redo 02/21/2014 Illumina OMNI SNP Array OMNI GTEX-13X6J-0002-SM-6WSAI C1 Blood Whole Blood 0013756 1167 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-6066 09/26/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13X6J-0011-R10a-SM-AHZN5 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1174 ChIP-Seq GTEX-13X6J-0011-R10b-SM-5PNWA C1, A1 8.8 Brain Brain - Frontal Cortex (BA9) 0009834 1174 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992975 706276 0.956468 0.994762 0.84839 22339 1 76 0.00171172 268 0 7.45393e+07 0.0430509 3.04762e+06 7.49318e+07 7.30178e+06 22347 3.71286e+07 0 0.108078 0.994762 0.843947 7.45393e+07 0.00269032 1.60832e+07 2.51813e+07 1.62533e+07 261 1.61551e+07 9.12965e+06 0.00220014 1.63055e+07 50.2316 0.0406719 0.996549 0 50.263 GTEX-13X6J-0011-R11a-SM-5P9HE C1, A1 9.1 Brain Brain - Cerebellar Hemisphere 0002037 1174 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990622 1.06644e+06 0.939617 0.990997 0.776735 24935 1 76 0.00297202 376 0 1.31967e+08 0.0600432 1.95026e+06 1.33166e+08 4.29087e+06 24968 6.56897e+07 0 0.162882 0.990997 0.769742 1.31967e+08 0.00352631 2.81036e+07 3.78809e+07 2.84345e+07 345 2.83191e+07 1.60451e+07 0.00324906 2.82852e+07 49.9701 0.0146453 0.991372 0 50.2926 GTEX-13X6J-0011-R3b-SM-5P9K5 C1, A1 7.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1174 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991973 1.30636e+06 0.945853 0.992503 0.809926 25002 1 76 0.00296935 269 0 1.12336e+08 0.053648 5.16397e+06 1.13184e+08 3.64991e+06 25023 5.59634e+07 0 0.135927 0.992503 0.803854 1.12336e+08 0.0031972 2.42418e+07 4.33252e+07 2.43042e+07 318 2.41913e+07 1.33272e+07 0.00308322 2.44359e+07 50.2515 0.0456244 0.993032 0 50.0643 GTEX-13X6J-0011-R4b-SM-5P9K4 C1, A1 6.5 Brain Brain - Amygdala 0001876 1174 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992355 928549 0.95578 0.993009 0.828602 23750 1 76 0.00297885 273 0 1.02011e+08 0.0439266 8.06577e+06 1.02729e+08 3.41699e+06 23769 5.08249e+07 0 0.127178 0.993009 0.822809 1.02011e+08 0.00331049 2.21337e+07 3.66379e+07 2.23273e+07 329 2.21611e+07 1.02748e+07 0.00314456 2.23832e+07 50.2493 0.0785151 0.993663 0 50.2177 GTEX-13X6J-0011-R5b-SM-5PNWT C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 1174 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992376 1.36571e+06 0.938037 0.993732 0.783358 24172 1 76 0.00179024 268 0 9.58745e+07 0.0616009 5.01033e+06 9.64792e+07 8.10544e+06 24188 4.77724e+07 0 0.154679 0.993732 0.778448 9.58745e+07 0.00265578 2.01773e+07 5.45262e+07 2.05611e+07 309 2.04361e+07 9.67124e+06 0.00222242 2.04351e+07 49.9988 0.0519317 0.995089 0 50.4711 GTEX-13X6J-0011-R6a-SM-5PNUB C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1174 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993888 819830 0.955201 0.99519 0.841432 23041 1 76 0.00172668 268 0 8.44672e+07 0.0442407 4.12054e+06 8.48755e+07 7.31937e+06 23057 4.20928e+07 0 0.113768 0.99519 0.837385 8.44672e+07 0.00256308 1.83606e+07 2.94466e+07 1.8321e+07 273 1.82632e+07 1.13876e+07 0.00214433 1.85318e+07 50.3649 0.0485481 0.996492 0 49.9461 GTEX-13X6J-0011-R7b-SM-5PNUC C1, A1 8.7 Brain Brain - Putamen (basal ganglia) 0001874 1174 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993181 663880 0.955333 0.994599 0.821994 23097 1 76 0.00176211 268 0 8.15502e+07 0.0443571 4.64961e+06 8.19931e+07 6.87078e+06 23112 4.0643e+07 0 0.133339 0.994599 0.817554 8.15502e+07 0.00269163 1.76415e+07 3.16536e+07 1.77116e+07 276 1.75223e+07 8.51638e+06 0.0022262 1.79484e+07 50.6005 0.0567073 0.996017 0 50.0992 GTEX-13X6J-0011-R8b-SM-5PNUA C1, A1 7.4 Brain Brain - Hypothalamus 0001898 1174 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992347 633810 0.957144 0.993939 0.827758 23146 1 76 0.0017799 271 0 7.88341e+07 0.0425715 5.32898e+06 7.93148e+07 7.60307e+06 23160 3.92805e+07 0 0.129386 0.993939 0.822741 7.88341e+07 0.00267841 1.69477e+07 2.9854e+07 1.7367e+07 283 1.71751e+07 7.81962e+06 0.00222843 1.72435e+07 50.0994 0.0671877 0.995531 0 50.6109 GTEX-13X6J-0126-SM-5QGOU 1 C1 6 pieces; ~10% external/periadnexal fat; 49um epidermis 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1251 1145 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.990426 189051 0.977319 0.991651 0.818604 22502 1 76 0.00189661 180 0 6.77955e+07 0.022435 270389 6.83663e+07 4.53796e+06 22520 3.37719e+07 0 0.158715 0.991651 0.81177 6.77955e+07 0.00289865 1.47816e+07 7.3161e+06 1.49080e+07 166 1.48667e+07 1.21964e+07 0.00239701 1.49069e+07 50.0676 0.003955 0.992876 0 50.213 GTEX-13X6J-0226-SM-7EPGC 1 C1 2 pieces; 5-10% fibrovascular tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 1254 1144 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99063 150110 0.972871 0.992893 0.796425 24316 1 76 0.00308791 143 0 9.33331e+07 0.0268071 415672 9.40012e+07 1.20135e+07 24348 4.64888e+07 0 0.176446 0.992893 0.790765 9.33331e+07 0.0116187 2.04341e+07 1.00477e+07 2.06731e+07 165 2.07262e+07 1.55051e+07 0.00734356 2.05759e+07 49.818 0.00442199 0.995156 0 50.2906 GTEX-13X6J-0326-SM-7EPGD 1 C1 2 pieces; one piece includes 5-10% internal fat 8.9 Muscle Muscle - Skeletal 0011907 1257 1142 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.992421 164711 0.984127 0.994796 0.881497 20505 1 76 0.00268127 152 0 1.04876e+08 0.0155131 1.05506e+06 1.05425e+08 1.41e+07 20520 5.22673e+07 0 0.10263 0.994796 0.87691 1.04876e+08 0.0110845 2.28258e+07 1.18757e+07 2.31033e+07 182 2.31677e+07 2.27113e+07 0.00687286 2.29796e+07 49.7961 0.0100078 0.997171 0 50.3022 GTEX-13X6J-0326-SM-CYKU6 1 C1 2 pieces; one piece includes 5-10% internal fat 8.9 Muscle Muscle - Skeletal 0011907 1257 1142 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-13X6J-0426-SM-5O9D3 1 C1 2 pieces; ~0.75 and 0.5 mm attached external fat 6.5 Nerve Nerve - Tibial 0001323 1290 1110 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.981622 333795 0.960991 0.984041 0.725092 25904 1 76 0.00375646 217 0 1.04968e+08 0.0387532 335244 1.0667e+08 5.12397e+06 25963 5.20034e+07 0 0.2359 0.984041 0.71352 1.04968e+08 0.00487561 2.29592e+07 1.0683e+07 2.29169e+07 237 2.30933e+07 1.44152e+07 0.00431466 2.30282e+07 49.9294 0.00314282 0.98646 0 49.9539 GTEX-13X6J-0626-SM-5LU5F 1 C1 6 pieces; hair-bearing skin with up to 15% external/internal (periadnexal) fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1308 1092 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991305 179059 0.973712 0.993209 0.798714 23877 1 76 0.00378301 158 0 7.47197e+07 0.0260414 203969 7.52306e+07 8.85795e+06 23907 3.71974e+07 0 0.174998 0.993209 0.79329 7.47197e+07 0.00369438 1.64424e+07 7.94146e+06 1.64366e+07 160 1.6451e+07 1.35175e+07 0.00373878 1.65691e+07 50.1788 0.00271125 0.995114 0 49.9911 GTEX-13X6J-0826-SM-5LU32 2 C1 2 pieces 6.9 Thyroid Thyroid 0002046 1318 1084 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990023 203562 0.971361 0.991972 0.81014 24093 1 76 0.0037779 146 0 7.24988e+07 0.0282821 133195 7.30856e+07 8.02863e+06 24120 3.60815e+07 0 0.161221 0.991972 0.803636 7.24988e+07 0.00381104 1.59301e+07 6.75548e+06 1.59902e+07 154 1.60173e+07 1.37142e+07 0.00379444 1.60423e+07 50.039 0.00182245 0.993921 0 50.0941 GTEX-13X6J-1226-SM-79OMF 1 C1 2 pieces; 10% internal fat; scattered small aggregates of lymphocytes (oulined) 7.3 Heart Heart - Atrial Appendage 0006631 1326 1078 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993837 124152 0.982924 0.994131 0.829113 21007 1 76 0.00281296 149 0 6.49676e+07 0.0168557 2.9557e+06 6.53512e+07 3.75734e+06 21023 3.23793e+07 0 0.153812 0.994131 0.824246 6.49676e+07 0.0040117 1.42543e+07 8.49633e+06 1.45213e+07 185 1.44528e+07 7.74394e+06 0.00341215 1.43269e+07 49.7812 0.045228 0.994425 0 50.4639 GTEX-13X6J-1326-SM-5QGOV 1 C1 2 pieces; fragment of artery wall and cross section of vessel with collapsed lumen, 30%attached fat 6.8 Blood Vessel Artery - Coronary 0001621 1331 1074 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991175 226944 0.969951 0.992789 0.75332 23546 1 76 0.00211649 143 0 6.76371e+07 0.029652 366345 6.81283e+07 4.83941e+06 23579 3.36343e+07 0 0.216631 0.992789 0.747888 6.76371e+07 0.00316436 1.47192e+07 7.04921e+06 1.48432e+07 156 1.47756e+07 1.0343e+07 0.00263957 1.48993e+07 50.2084 0.00537728 0.994403 0 50.2096 GTEX-13X6J-1626-SM-5Q5CV 1 C1 6 pieces; well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 1335 1072 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.978076 154984 0.97381 0.980705 0.83967 23107 1 76 0.0020089 367 0 9.4277e+07 0.0260588 3.30118e+06 9.61319e+07 1.30826e+07 23132 4.68831e+07 0 0.13414 0.980705 0.823469 9.4277e+07 0.00360534 2.09224e+07 1.16544e+07 2.09667e+07 344 2.0852e+07 7.79885e+06 0.00280498 2.1263e+07 50.488 0.0343401 0.983334 0 50.0529 GTEX-13X6J-1726-SM-5TDCS 1 C1 6 pieces; well trimmed 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 1336 1071 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987867 211553 0.970859 0.991159 0.818069 23186 1 76 0.00225517 262 0 7.77269e+07 0.0289727 2.13599e+06 7.84202e+07 1.01106e+07 23208 3.86146e+07 0 0.15279 0.991159 0.810836 7.77269e+07 0.00411119 1.70465e+07 9.42864e+06 1.71742e+07 259 1.70793e+07 7.8063e+06 0.0031801 1.73762e+07 50.4309 0.0272377 0.99445 0 50.1866 GTEX-13X6J-1826-SM-5TDCT 1 C1 2 pieces; marked steatosis and congestion 5.7 Liver Liver 0001114 1338 1069 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987186 260564 0.978234 0.99116 0.852114 20789 1 76 0.00203476 366 0 8.57438e+07 0.0217119 2.59183e+06 8.65085e+07 1.12761e+07 20803 4.25715e+07 0 0.12612 0.99116 0.844581 8.57438e+07 0.00410407 1.90853e+07 2.33481e+07 1.89624e+07 381 1.87247e+07 5.41446e+06 0.00306527 1.96009e+07 51.1431 0.0299604 0.995134 0 49.8385 GTEX-13X6J-1926-SM-5TDCU 1 C1 2 pieces 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1339 1069 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988506 205857 0.971501 0.991194 0.813205 23851 1 76 0.00228041 160 0 7.3398e+07 0.0281917 313588 7.405e+07 8.70746e+06 23870 3.64737e+07 0 0.158296 0.991194 0.806044 7.3398e+07 0.00417982 1.60984e+07 8.87115e+06 1.61865e+07 178 1.6141e+07 1.23087e+07 0.00322754 1.63413e+07 50.3083 0.00423481 0.993882 0 50.1365 GTEX-13X6J-2126-SM-5TDCV 2 C1 6 pieces; full thickness sections; congestion 5.7 Stomach Stomach 0000945 1342 1067 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.982325 165401 0.979259 0.986023 0.8431 23056 1 76 0.00228883 244 0 6.71829e+07 0.0200254 1.26598e+06 6.81352e+07 8.19646e+06 23074 3.33325e+07 0 0.136159 0.986023 0.831316 6.71829e+07 0.00458062 1.51576e+07 4.26155e+07 1.54139e+07 202 1.53849e+07 1.24075e+07 0.00343043 1.54333e+07 50.0786 0.0185803 0.98972 0 50.4192 GTEX-13X6J-2826-SM-7EPGA 1 C1 6 pieces; predominantly well trimmed 5.8 Colon Colon - Sigmoid 0001159 1368 1045 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989875 233929 0.965682 0.992167 0.822985 23125 1 76 0.00306941 159 0 1.02373e+08 0.0341273 1.57322e+06 1.03181e+08 1.42563e+07 23148 5.09664e+07 0 0.142697 0.992167 0.816538 1.02373e+08 0.0117026 2.17178e+07 1.31637e+07 2.20695e+07 199 2.2028e+07 1.49424e+07 0.00737603 2.19758e+07 49.9407 0.0152472 0.994459 0 50.4016 GTEX-13X6J-2926-SM-7EPGP 1 C1 4 pieces; Purkinje cells present 7.6 Brain Brain - Cerebellum 0002037 1386 1028 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.987593 585844 0.931429 0.989363 0.671209 25495 1 76 0.00328232 132 0 1.00662e+08 0.0682468 1.39327e+06 1.01744e+08 1.49182e+07 25535 5.00172e+07 0 0.260221 0.989363 0.664069 1.00662e+08 0.0116933 2.13712e+07 2.70993e+07 2.15282e+07 169 2.16064e+07 1.04749e+07 0.00748027 2.14683e+07 49.8397 0.0136938 0.991132 0 50.1829 GTEX-13X6J-3026-SM-5Q5CU 1 C1 4 pieces 6.2 Brain Brain - Cortex 0001870 1389 1025 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988325 397827 0.96342 0.991549 0.842403 23261 1 76 0.001954 369 0 8.29813e+07 0.0362764 4.64616e+06 8.36886e+07 1.1474e+07 23277 4.12538e+07 0 0.121017 0.991549 0.835284 8.29813e+07 0.00370397 1.82277e+07 2.21725e+07 1.82185e+07 339 1.81209e+07 8.16839e+06 0.00282614 1.85639e+07 50.6039 0.0555173 0.994773 0 49.9873 GTEX-13X6J-3126-SM-5Q5EJ 2 C1 1 piece; adenohypophysis, dura 7.7 Pituitary Pituitary 0000007 1390 1025 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990194 236689 0.965289 0.993007 0.806884 25472 1 76 0.00213137 205 0 8.14678e+07 0.0342849 1.149e+06 8.20415e+07 1.15348e+07 25506 4.05203e+07 0 0.158405 0.993007 0.801242 8.14678e+07 0.00340596 1.77095e+07 9.41225e+06 1.78201e+07 224 1.78513e+07 1.38598e+07 0.00276686 1.78972e+07 50.0643 0.0140051 0.995819 0 50.1557 GTEX-13X6K-0003-SM-5DU4M C1 Blood Whole Blood 0013756 867 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-13X6K-0003-SM-5HJPO C1 Blood Whole Blood 0013756 867 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 GTEx_OM25_Jan14_01 02/12/2014 Illumina OMNI SNP Array OMNI GTEX-13X6K-0003-SM-6WSAL C1 Blood Whole Blood 0013756 867 BP-45435 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/04/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-13X6K-0011-R10a-SM-5P9JR C1, A1 9.1 Brain Brain - Frontal Cortex (BA9) 0009834 875 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992321 1.22459e+06 0.948642 0.992854 0.83143 24573 1 76 0.0031774 272 0 9.93226e+07 0.0507726 2.50354e+06 1.00037e+08 3.21242e+06 24593 4.94716e+07 0 0.117213 0.992854 0.825489 9.93226e+07 0.00342654 2.15518e+07 2.87173e+07 2.16024e+07 291 2.15367e+07 1.46985e+07 0.0033019 2.16869e+07 50.1737 0.025026 0.993388 0 50.0586 GTEX-13X6K-0011-R11a-SM-5P9F5 C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 875 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.991262 800747 0.940091 0.9913 0.736377 25346 1 76 0.0031405 273 0 1.12447e+08 0.0594971 1.59757e+06 1.13433e+08 3.82269e+06 25383 5.5944e+07 0 0.203714 0.9913 0.729971 1.12447e+08 0.00364906 2.41033e+07 2.16918e+07 2.41705e+07 307 2.41149e+07 1.41471e+07 0.00339477 2.41801e+07 50.0675 0.0140838 0.991338 0 50.0696 GTEX-13X6K-0011-R2b-SM-5P9K3 C1, A1 6.7 Brain Brain - Substantia nigra 0002038 875 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990897 626157 0.965983 0.991648 0.838097 23957 1 76 0.0033416 275 0 1.05757e+08 0.0337555 7.98951e+06 1.06647e+08 3.50094e+06 23981 5.26848e+07 0 0.127886 0.991648 0.831097 1.05757e+08 0.00369888 2.32112e+07 2.55258e+07 2.36833e+07 329 2.33358e+07 1.18092e+07 0.00352011 2.36309e+07 50.3142 0.0749152 0.992399 0 50.5034 GTEX-13X6K-0011-R3b-SM-5PNUD C1, A1 8.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 875 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992797 685480 0.949879 0.994489 0.80285 24095 1 76 0.00199402 203 0 7.42614e+07 0.0496698 2.2156e+06 7.46729e+07 6.9716e+06 24115 3.69869e+07 0 0.147029 0.994489 0.798426 7.42614e+07 0.00288238 1.60967e+07 1.83075e+07 1.619e+07 230 1.61579e+07 9.91898e+06 0.00243744 1.62554e+07 50.1504 0.0296707 0.996181 0 50.1445 GTEX-13X6K-0011-R4b-SM-5P9HO C1, A1 6.7 Brain Brain - Amygdala 0001876 875 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.993154 1.25302e+06 0.952661 0.993542 0.814977 25717 1 76 0.00323522 379 0 1.47759e+08 0.0469636 8.54056e+06 1.4872e+08 4.58558e+06 25752 7.36394e+07 0 0.137684 0.993542 0.809713 1.47759e+08 0.00346903 3.19461e+07 5.03533e+07 3.21464e+07 333 3.19234e+07 1.70849e+07 0.00335208 3.22446e+07 50.2503 0.0574272 0.99393 0 50.1562 GTEX-13X6K-0011-R5b-SM-5PNUE C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 875 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992911 800591 0.949038 0.994437 0.811087 24083 1 76 0.0020794 269 0 8.35969e+07 0.0507059 4.32819e+06 8.40646e+07 7.6556e+06 24099 4.16498e+07 0 0.137951 0.994437 0.806575 8.35969e+07 0.00299905 1.79692e+07 2.5731e+07 1.81965e+07 278 1.80819e+07 9.23925e+06 0.00253852 1.82158e+07 50.1843 0.0514865 0.995964 0 50.3142 GTEX-13X6K-0011-R6a-SM-5P9K6 C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 875 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991013 1.2376e+06 0.946594 0.991538 0.792992 26247 1 76 0.00330748 273 0 1.19704e+08 0.0529415 4.34072e+06 1.20725e+08 4.01907e+06 26281 5.95976e+07 0 0.153602 0.991538 0.786282 1.19704e+08 0.00357797 2.58625e+07 3.0329e+07 2.59434e+07 324 2.58277e+07 1.60334e+07 0.00344265 2.60513e+07 50.2155 0.0359553 0.992063 0 50.0781 GTEX-13X6K-0011-R7b-SM-5P9K7 C1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 875 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992139 1.7165e+06 0.946464 0.992594 0.804186 25998 1 76 0.0032472 377 0 1.55763e+08 0.0532739 1.00853e+07 1.56925e+08 4.79421e+06 26025 7.76306e+07 0 0.142278 0.992594 0.798231 1.55763e+08 0.00344341 3.31257e+07 6.73859e+07 3.38259e+07 340 3.33726e+07 1.55795e+07 0.00334526 3.36398e+07 50.1994 0.0642679 0.993049 0 50.5229 GTEX-13X6K-0011-R8b-SM-5PNZ4 C1, A1 9.2 Brain Brain - Hypothalamus 0001898 875 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992294 923922 0.955249 0.993184 0.836498 25467 1 76 0.00305247 273 0 1.03791e+08 0.0442201 2.49013e+06 1.04503e+08 2.95116e+06 25498 5.16918e+07 0 0.118751 0.993184 0.830796 1.03791e+08 0.00344672 2.26446e+07 2.3299e+07 2.28305e+07 322 2.27996e+07 1.61029e+07 0.00324942 2.27799e+07 49.9784 0.0238283 0.994074 0 50.2044 GTEX-13X6K-0226-SM-5QGPB 0 C1 2 pieces, minimal fascia 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 965 830 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99226 170208 0.975638 0.993456 0.802543 22709 1 76 0.00201331 172 0 7.84882e+07 0.0240035 545509 7.90052e+07 4.86387e+06 22736 3.90757e+07 0 0.173095 0.993456 0.797291 7.84882e+07 0.00295499 1.73247e+07 7.95876e+06 1.74097e+07 198 1.73394e+07 1.28935e+07 0.00248358 1.74938e+07 50.2217 0.00690472 0.994652 0 50.1224 GTEX-13X6K-0326-SM-5Q5D6 0 C1 2 pieces, ~15% interstitial fat; rep delineated. Many fibres appear atrophic and/or degenerated 8.7 Muscle Muscle - Skeletal 0011907 967 828 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987356 139818 0.978723 0.989113 0.846291 21662 1 76 0.0019854 207 0 8.63042e+07 0.0209897 1.02548e+06 8.72541e+07 1.06527e+07 21677 4.29911e+07 0 0.132432 0.989113 0.837077 8.63042e+07 0.00315961 1.86953e+07 9.2404e+06 1.87549e+07 228 1.86811e+07 1.77666e+07 0.00257146 1.89063e+07 50.2996 0.0117528 0.990869 0 50.0795 GTEX-13X6K-0426-SM-5O9DZ 0 C1 2 pieces, good clean specimens; minute nubbin of adherent fat on one, ~0.3mm 8.2 Nerve Nerve - Tibial 0001323 969 827 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986607 326411 0.967097 0.988757 0.732399 26647 1 76 0.00357658 389 0 1.44783e+08 0.0325585 429280 1.46429e+08 5.65819e+06 26711 7.19087e+07 0 0.234698 0.988757 0.724165 1.44783e+08 0.00446383 3.18103e+07 1.2933e+07 3.19212e+07 351 3.20773e+07 2.33367e+07 0.00401924 3.19489e+07 49.8997 0.00293166 0.990907 0 50.0871 GTEX-13X6K-0526-SM-5LU51 0 C1 2 pieces, clean, no atherosis 6.9 Blood Vessel Artery - Tibial 0007610 970 826 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992982 111903 0.971884 0.994468 0.789292 21999 1 76 0.00375339 140 0 7.525e+07 0.0277309 363982 7.56686e+07 9.03877e+06 22028 3.748e+07 0 0.182592 0.994468 0.784926 7.525e+07 0.00334552 1.62037e+07 6.86752e+06 1.6206e+07 157 1.62046e+07 1.41111e+07 0.00354976 1.63116e+07 50.1644 0.00481021 0.995955 0 50.0035 GTEX-13X6K-0626-SM-5LU5D 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~30 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 972 824 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992313 201175 0.974958 0.994081 0.79948 24308 1 76 0.00369262 188 0 8.8895e+07 0.0247667 375876 8.94243e+07 9.50739e+06 24337 4.42562e+07 0 0.175479 0.994081 0.794747 8.8895e+07 0.00348442 1.9633e+07 1.00933e+07 1.96131e+07 194 1.96132e+07 1.69391e+07 0.0035887 1.97923e+07 50.2272 0.00420329 0.995848 0 49.9747 GTEX-13X6K-0726-SM-5LU2Z 1 C1 2 pieces, minimal fascia/fbirous tissue 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 973 824 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991889 221891 0.976293 0.99382 0.807187 23550 1 76 0.00387826 208 0 9.08966e+07 0.0234217 1.95512e+06 9.14618e+07 1.06297e+07 23579 4.52411e+07 0 0.169106 0.99382 0.802198 9.08966e+07 0.00390959 2.0189e+07 1.2452e+07 2.02082e+07 247 2.02043e+07 1.33039e+07 0.0038939 2.03693e+07 50.2034 0.0213764 0.995752 0 50.0237 GTEX-13X6K-1626-SM-7EWCX 1 C1 2 pieces, mild congestion, partially sloughing bronchial mucosa delineated 6.9 Lung Lung 0008952 994 809 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991813 97149 0.978961 0.993516 0.759959 23427 1 76 0.00251879 137 0 6.57995e+07 0.0205227 336241 6.6229e+07 5.67287e+06 23465 3.27608e+07 0 0.219002 0.993516 0.755031 6.57995e+07 0.00349106 1.47246e+07 7.47469e+06 1.47705e+07 143 1.47937e+07 1.12913e+07 0.00300409 1.48069e+07 50.0224 0.00507695 0.995218 0 50.0778 GTEX-13X6K-1726-SM-7IGLG 1 C1 2 pieces, no abnormalities 7.1 Heart Heart - Atrial Appendage 0006631 994 809 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995487 353476 0.978713 0.996385 0.829439 23519 1 76 0.0019289 272 0 1.24409e+08 0.0210009 3.03694e+06 1.2486e+08 6.73682e+06 23547 6.20423e+07 0 0.149274 0.996385 0.826441 1.24409e+08 0.00285355 2.67529e+07 1.92978e+07 2.70063e+07 330 2.69664e+07 2.11938e+07 0.00239081 2.68785e+07 49.9184 0.0243227 0.997283 0 50.2356 GTEX-13X6K-1826-SM-5O9CR 1 C1 2 pieces, minimal ischemic changes 6.9 Heart Heart - Left Ventricle 0006566 995 809 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986866 262307 0.980644 0.98933 0.84444 22523 1 76 0.00371556 369 0 1.18099e+08 0.0192439 7.0653e+06 1.19373e+08 5.03529e+06 22542 5.87009e+07 0 0.136204 0.98933 0.83543 1.18099e+08 0.00468481 2.60281e+07 2.65245e+07 2.67066e+07 368 2.66747e+07 1.17457e+07 0.00419898 2.6294e+07 49.6407 0.0591869 0.991795 0 50.6433 GTEX-13X6K-1926-SM-5LU4O 1 C1 6 pieces, atherosis up to ~0.4mm thicki 6.8 Blood Vessel Artery - Aorta 0001496 996 810 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991252 165754 0.972752 0.992883 0.772526 22845 1 76 0.00392949 172 0 8.39501e+07 0.0268151 192308 8.45519e+07 1.04533e+07 22872 4.17733e+07 0 0.200226 0.992883 0.767028 8.39501e+07 0.00362856 1.82556e+07 7.33742e+06 1.82606e+07 173 1.8279e+07 1.54142e+07 0.00377927 1.83732e+07 50.1284 0.00227444 0.994514 0 50.0068 GTEX-13X6K-2126-SM-5O9D4 1 C1 6 pieces, squamous mucosa is ~20% thickness 7.4 Esophagus Esophagus - Mucosa 0006920 998 810 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984414 443398 0.971728 0.987074 0.740821 24825 1 76 0.00370876 196 0 1.02405e+08 0.0279796 457463 1.03746e+08 4.46145e+06 24858 5.07934e+07 0 0.230907 0.987074 0.731245 1.02405e+08 0.00485423 2.28205e+07 1.13917e+07 2.28787e+07 209 2.30493e+07 1.70205e+07 0.00427995 2.29231e+07 49.8628 0.00440945 0.989733 0 50.0636 GTEX-13X6K-2226-SM-79OMI 1 C1 6 pieces, all muscularis 7.4 Esophagus Esophagus - Muscularis 0004648 999 811 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99328 123983 0.973733 0.993299 0.814328 22115 1 76 0.00313125 127 0 6.14327e+07 0.0260091 548546 6.18471e+07 3.71795e+06 22135 3.05858e+07 0 0.159405 0.993299 0.808871 6.14327e+07 0.00440477 1.32902e+07 5.04419e+06 1.34025e+07 141 1.33747e+07 1.07754e+07 0.003768 1.33227e+07 49.9026 0.00886938 0.993317 0 50.2104 GTEX-13X6K-2726-SM-5O9DG 1 C1 6 pieces, all muscularis 6.1 Colon Colon - Sigmoid 0001159 1008 805 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.981291 273677 0.970822 0.984087 0.802363 25086 1 76 0.00378381 272 0 1.06491e+08 0.028921 839290 1.08213e+08 5.25013e+06 25117 5.27722e+07 0 0.168458 0.984087 0.789595 1.06491e+08 0.00499478 2.30445e+07 1.02108e+07 2.31924e+07 263 2.3295e+07 1.76601e+07 0.00438758 2.32343e+07 49.9347 0.00775588 0.986882 0 50.1599 GTEX-13X6K-2826-SM-5O9DS 1 C1 4 pieces, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 1017 797 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985423 740208 0.935344 0.987727 0.698065 25737 1 76 0.00387075 271 0 1.18464e+08 0.0642948 1.92362e+06 1.19936e+08 4.87179e+06 25790 5.88398e+07 0 0.237279 0.987727 0.689498 1.18464e+08 0.00473711 2.52683e+07 3.11902e+07 2.54097e+07 287 2.55647e+07 1.3732e+07 0.00430292 2.53616e+07 49.8006 0.0160386 0.990031 0 50.1396 GTEX-13X6K-2926-SM-5Q5D5 1 C1 4 pieces, no abnormalities 6.5 Brain Brain - Cortex 0001870 1020 794 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.974166 736528 0.948375 0.976837 0.81796 23764 1 76 0.00234953 267 0 8.45459e+07 0.0512654 5.38666e+06 8.65507e+07 1.10798e+07 23782 4.20521e+07 0 0.130415 0.976837 0.799013 8.45459e+07 0.00382619 1.82162e+07 3.52584e+07 1.84024e+07 308 1.83335e+07 9.16606e+06 0.00308584 1.8494e+07 50.2178 0.062237 0.979508 0 50.2542 GTEX-13X6K-3026-SM-5QGPA 1 C1 1 piece, ~50% neurohypophysis, delineated; rest is adenohypophysis 7.4 Pituitary Pituitary 0000007 1023 792 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992678 217849 0.963702 0.994038 0.772464 24606 1 76 0.00196022 129 0 6.18247e+07 0.0359926 282238 6.21955e+07 4.47342e+06 24632 3.07902e+07 0 0.191238 0.994038 0.767859 6.18247e+07 0.00285329 1.3189e+07 6.62608e+06 1.33188e+07 141 1.33005e+07 1.04891e+07 0.00240614 1.32897e+07 49.9798 0.00453792 0.995399 0 50.2447 GTEX-13YAN-0226-SM-5TDC6 0 C1 6 pieces, minimal dermal fat. Squamous epithelium is ~70 microns 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 477 1322 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987809 177996 0.98197 0.990903 0.783893 22509 1 76 0.00249587 155 0 7.10273e+07 0.017695 476123 7.16794e+07 8.0176e+06 22526 3.52753e+07 0 0.198077 0.990903 0.776762 7.10273e+07 0.0044618 1.58339e+07 8.0194e+06 1.57564e+07 157 1.57569e+07 1.24374e+07 0.00347576 1.60542e+07 50.4674 0.0066424 0.993997 0 49.8774 GTEX-13YAN-0326-SM-5O9DF 0 C1 6 pieces, minimal dermal fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 601 1198 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986362 240962 0.977658 0.988597 0.817706 23345 1 76 0.00376798 224 0 8.97303e+07 0.0220046 328953 9.07653e+07 3.49366e+06 23374 4.45759e+07 0 0.159952 0.988597 0.808382 8.97303e+07 0.00477511 1.97194e+07 9.29622e+06 1.98387e+07 201 1.99221e+07 1.71422e+07 0.00427041 1.98295e+07 49.8835 0.00362421 0.990833 0 50.1509 GTEX-13YAN-0426-SM-5O9DR 0 C1 2 pieces. Fascia is ~10 %, rep delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 603 1197 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.986206 313327 0.979142 0.988898 0.836132 23381 1 76 0.00372889 215 0 9.74605e+07 0.0205633 298811 9.85547e+07 4.17503e+06 23404 4.84069e+07 0 0.14301 0.988898 0.82685 9.74605e+07 0.0048707 2.14606e+07 9.21244e+06 2.17057e+07 226 2.17926e+07 1.91208e+07 0.00429824 2.16248e+07 49.8067 0.00303193 0.99159 0 50.2839 GTEX-13YAN-0526-SM-5O9BE 1 C1 2 pieces, markedly atrophic, ~50% interstitial fibrous tissue; fibres abnormal 7.3 Muscle Muscle - Skeletal 0011907 608 1192 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985514 297834 0.970323 0.988171 0.782205 24550 1 76 0.00368853 283 0 1.11511e+08 0.0294254 561117 1.12846e+08 4.86559e+06 24593 5.53575e+07 0 0.188118 0.988171 0.772952 1.11511e+08 0.00473845 2.41674e+07 1.10106e+07 2.43619e+07 268 2.4499e+07 1.97825e+07 0.00421208 2.43093e+07 49.8057 0.00497241 0.990828 0 50.2004 GTEX-13YAN-0626-SM-5O9BQ 0 C1 2 pieces, excellent clean specimens 6.8 Nerve Nerve - Tibial 0001323 609 1192 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.984708 236425 0.965645 0.986955 0.727951 25240 1 76 0.00386016 223 0 1.01578e+08 0.0340704 220357 1.02921e+08 4.31956e+06 25297 5.04042e+07 0 0.237694 0.986955 0.718455 1.01578e+08 0.00489794 2.22578e+07 9.59078e+06 2.23313e+07 214 2.24642e+07 1.58569e+07 0.00437787 2.23436e+07 49.8655 0.00214103 0.989203 0 50.0824 GTEX-13YAN-0926-SM-5O9C3 1 C1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 625 1177 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.983946 375190 0.962766 0.986611 0.690447 25483 1 76 0.00396309 169 0 1.00724e+08 0.0369527 160681 1.02091e+08 4.50358e+06 25537 4.99669e+07 0 0.272319 0.986611 0.681203 1.00724e+08 0.00507913 2.19502e+07 1.35647e+07 2.20102e+07 195 2.21872e+07 1.42239e+07 0.0045196 2.20318e+07 49.8244 0.00157391 0.989276 0 50.0682 GTEX-13YAN-1026-SM-5O9CF 2 C1 2 pieces, moderate congestion2 7.6 Lung Lung 0008952 627 1176 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985293 237898 0.974417 0.987915 0.753548 24843 1 76 0.00406934 207 0 9.7879e+07 0.0251216 400382 9.90763e+07 4.18915e+06 24884 4.86049e+07 0 0.22087 0.987915 0.744441 9.7879e+07 0.00504239 2.1604e+07 8.37123e+06 2.17357e+07 224 2.18519e+07 1.61353e+07 0.00455457 2.17325e+07 49.863 0.00404115 0.990536 0 50.152 GTEX-13YAN-1126-SM-5TDC7 1 C1 2 pieces, no significant fascia/vascular tissue 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 629 1174 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987224 183157 0.980771 0.991307 0.826356 21982 1 76 0.00233821 143 0 6.29924e+07 0.0189212 106051 6.35448e+07 8.09542e+06 21998 3.12751e+07 0 0.154415 0.991307 0.819173 6.29924e+07 0.00439603 1.3866e+07 7.71303e+06 1.39922e+07 142 1.40162e+07 1.35136e+07 0.00336288 1.41009e+07 50.1506 0.00166892 0.995391 0 50.2264 GTEX-13YAN-1326-SM-5Q5F1 1 C1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis 6.3 Heart Heart - Left Ventricle 0006566 635 1169 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988317 115881 0.986635 0.990762 0.854386 18635 1 76 0.00315752 367 0 9.04848e+07 0.013307 4.91022e+06 9.13285e+07 1.16212e+07 18640 4.5053e+07 0 0.132249 0.990762 0.846493 9.04848e+07 0.00473851 1.96518e+07 4.37503e+07 1.97612e+07 347 1.92903e+07 4.74404e+06 0.00394606 2.02517e+07 51.2157 0.0537643 0.993208 0 50.1387 GTEX-13YAN-1326-SM-DK2JK 1 C1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis Heart Heart - Left Ventricle 0006566 635 1169 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-13YAN-1326-SM-DLIPO 1 C1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis Heart Heart - Left Ventricle 0006566 635 1169 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-13YAN-1426-SM-7EPG8 1 C1 2 pieces, no abnormalities 5.8 Heart Heart - Atrial Appendage 0006631 635 1170 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.988263 123128 0.980548 0.99074 0.853657 21487 1 76 0.00359667 170 0 9.74625e+07 0.0192829 4.85098e+06 9.83735e+07 1.29582e+07 21502 4.85528e+07 0 0.126891 0.99074 0.845752 9.74625e+07 0.0119429 2.07531e+07 1.89841e+07 2.15118e+07 204 2.1329e+07 9.8193e+06 0.00775934 2.10895e+07 49.7176 0.0493119 0.993217 0 50.8976 GTEX-13YAN-1526-SM-5LU3E 1 C1 6 pieces, atherosis up to ~0.6 5.8 Blood Vessel Artery - Aorta 0001496 636 1169 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990758 177337 0.971348 0.992808 0.767616 22864 1 76 0.00408751 139 0 7.33438e+07 0.0283235 150914 7.38751e+07 7.82757e+06 22893 3.64659e+07 0 0.203732 0.992808 0.762095 7.33438e+07 0.00415276 1.57946e+07 6.58133e+06 1.58627e+07 152 1.58561e+07 1.24214e+07 0.00412007 1.59511e+07 50.1492 0.00204283 0.994857 0 50.1075 GTEX-13YAN-1826-SM-5LU3Q 1 C1 6 pieces, all muscularis, good specimens 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 641 1166 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.990312 266031 0.968183 0.992511 0.745736 23743 1 76 0.00407958 146 0 7.54159e+07 0.0315789 386698 7.5985e+07 8.4591e+06 23774 3.74911e+07 0 0.222447 0.992511 0.740151 7.54159e+07 0.004184 1.6378e+07 6.69137e+06 1.64531e+07 156 1.64528e+07 1.15735e+07 0.00413168 1.65414e+07 50.1343 0.00508914 0.994711 0 50.1144 GTEX-13YAN-1926-SM-7EPH9 1 C1 6 pieces, squamous mucosa is ~1520% thickness; submucosal mucus glands noted, rep. delineated 8 Esophagus Esophagus - Mucosa 0006920 642 1165 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989538 370692 0.970641 0.992068 0.768194 23456 1 76 0.0032774 124 0 8.40794e+07 0.0290809 344516 8.47516e+07 1.18268e+07 23482 4.18381e+07 0 0.202447 0.992068 0.762101 8.40794e+07 0.011878 1.86372e+07 1.09296e+07 1.87696e+07 143 1.88312e+07 1.42905e+07 0.00756676 1.87831e+07 49.9362 0.00406501 0.994599 0 50.177 GTEX-13YAN-2026-SM-5Q5EY 1 C1 6 pieces, all muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 643 1165 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.98805 191198 0.963352 0.991289 0.745208 24931 1 76 0.00255475 271 0 9.88014e+07 0.0364563 1.43557e+06 9.96697e+07 1.48528e+07 24974 4.9077e+07 0 0.218145 0.991289 0.738716 9.88014e+07 0.00429193 2.13619e+07 1.00963e+07 2.14508e+07 283 2.14291e+07 1.18932e+07 0.0034205 2.16819e+07 50.2932 0.0144033 0.994528 0 50.1039 GTEX-13YAN-2126-SM-5Q5C4 2 C1 2 pieces, moderately advanced saponification. Islets not well visualized 6.3 Pancreas Pancreas 0001150 646 1162 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98795 179811 0.963961 0.990505 0.75155 22694 1 76 0.00217717 124 0 7.34591e+07 0.0358615 258990 7.41633e+07 5.76171e+06 22717 3.65297e+07 0 0.212411 0.990505 0.744414 7.34591e+07 0.00313513 1.64404e+07 1.15731e+07 1.65932e+07 135 1.65927e+07 1.52503e+07 0.00265491 1.66336e+07 50.0614 0.00349216 0.993059 0 50.2314 GTEX-1445S-0011-R10a-SM-5PNWB B1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 618 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.989922 779283 0.946151 0.991594 0.8207 21536 1 76 0.00235543 154 0 6.11823e+07 0.0535595 4.05346e+06 6.17009e+07 5.67347e+06 21545 3.04723e+07 0 0.125451 0.991594 0.813801 6.11823e+07 0.00329806 1.31333e+07 3.01528e+07 1.32446e+07 178 1.30688e+07 6.02309e+06 0.00282595 1.34174e+07 50.658 0.0656953 0.993267 0 50.2109 GTEX-1445S-0011-R2b-SM-5PNUH B1, A1 7 Brain Brain - Substantia nigra 0002038 618 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992672 426257 0.962683 0.994615 0.838339 22447 1 76 0.00233429 207 0 7.36217e+07 0.0371216 4.70001e+06 7.40204e+07 6.90162e+06 22460 3.66645e+07 0 0.124344 0.994615 0.833824 7.36217e+07 0.00342168 1.59996e+07 1.99535e+07 1.64685e+07 255 1.6265e+07 7.09952e+06 0.00287692 1.63286e+07 50.0977 0.0634962 0.996557 0 50.7221 GTEX-1445S-0011-R3a-SM-5P9HY B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 618 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991612 982235 0.958155 0.992192 0.832094 23011 1 76 0.00360375 371 0 1.10573e+08 0.0415943 8.58292e+06 1.11443e+08 3.53869e+06 23029 5.50869e+07 0 0.12606 0.992192 0.825597 1.10573e+08 0.0039521 2.38513e+07 4.82238e+07 2.42296e+07 336 2.38879e+07 9.44656e+06 0.00377782 2.42682e+07 50.3949 0.0770164 0.992772 0 50.3934 GTEX-1445S-0011-R4a-SM-5PNWN B1, A1 6.5 Brain Brain - Amygdala 0001876 618 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.985007 855792 0.947477 0.987304 0.799023 22465 1 76 0.00258015 194 0 6.93448e+07 0.0523079 5.45279e+06 7.02365e+07 6.49328e+06 22479 3.45176e+07 0 0.148454 0.987304 0.788878 6.93448e+07 0.00363183 1.47068e+07 3.73337e+07 1.51769e+07 209 1.49719e+07 5.38284e+06 0.00310477 1.50629e+07 50.1514 0.0776348 0.9896 0 50.7867 GTEX-1445S-0011-R5a-SM-5PNUS B1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 618 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991592 1.19551e+06 0.947026 0.992962 0.793948 22711 1 76 0.00243155 268 0 9.24816e+07 0.0527126 6.13343e+06 9.31371e+07 8.24573e+06 22722 4.6096e+07 0 0.153078 0.992962 0.788361 9.24816e+07 0.00336016 1.94563e+07 6.10549e+07 1.97807e+07 299 1.95926e+07 7.91777e+06 0.00289521 1.97633e+07 50.2168 0.0658538 0.994332 0 50.4134 GTEX-1445S-0011-R6b-SM-5PNUF B1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 618 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991276 768974 0.955932 0.993034 0.813348 22652 1 76 0.00247205 267 0 8.41808e+07 0.0438758 7.1588e+06 8.47713e+07 7.4673e+06 22668 4.19364e+07 0 0.142584 0.993034 0.807682 8.41808e+07 0.00359751 1.80051e+07 4.44353e+07 1.82593e+07 298 1.79928e+07 6.90649e+06 0.00303378 1.84108e+07 50.5741 0.0844483 0.994792 0 50.3505 GTEX-1445S-0011-R7b-SM-5PNUG B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 618 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992386 1.00949e+06 0.945657 0.994099 0.811372 22157 1 76 0.00234769 268 0 7.68167e+07 0.0541131 4.99282e+06 7.72727e+07 6.47066e+06 22164 3.82686e+07 0 0.134285 0.994099 0.806584 7.68167e+07 0.00342403 1.63123e+07 4.43051e+07 1.65595e+07 266 1.64024e+07 6.8804e+06 0.00288493 1.6613e+07 50.319 0.064613 0.995811 0 50.376 GTEX-1445S-0011-R8a-SM-5PNWX B1, A1 7 Brain Brain - Hypothalamus 0001898 618 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.987323 976302 0.958106 0.988265 0.828468 23733 1 76 0.00353867 370 0 1.09435e+08 0.0416893 9.85141e+06 1.10734e+08 3.05044e+06 23752 5.45064e+07 0 0.129638 0.988265 0.818745 1.09435e+08 0.00404597 2.35435e+07 4.43036e+07 2.43079e+07 365 2.3769e+07 9.21101e+06 0.00379208 2.41826e+07 50.4312 0.0889646 0.989207 0 50.7988 GTEX-1445S-0626-SM-5LU3C 0 B1 2 pieces, interstitial fat up to ~10% rep delineated 7.9 Muscle Muscle - Skeletal 0011907 773 662 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993656 146867 0.985147 0.995139 0.857693 19373 1 76 0.00361322 134 0 7.11839e+07 0.0145513 328967 7.15315e+07 9.00079e+06 19382 3.54783e+07 0 0.127454 0.995139 0.853524 7.11839e+07 0.00333824 1.5279e+07 6.50435e+06 1.51933e+07 146 1.52155e+07 1.59893e+07 0.00347593 1.53581e+07 50.2333 0.00459891 0.996623 0 49.8594 GTEX-1445S-1126-SM-5QGOW 1 B1 2 pieces, subtotally occlusive focally calcified atherosis, delineated 5.8 Blood Vessel Artery - Coronary 0001621 808 627 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.990309 202570 0.967758 0.991512 0.738741 22646 1 76 0.00218033 142 0 6.85507e+07 0.0319553 649817 6.91375e+07 4.2323e+06 22678 3.41005e+07 0 0.229017 0.991512 0.73247 6.85507e+07 0.00316573 1.49212e+07 1.00962e+07 1.50665e+07 161 1.4976e+07 9.51377e+06 0.00267243 1.51013e+07 50.2083 0.0093989 0.992716 0 50.2422 GTEX-1445S-1226-SM-5O9BF 1 B1 2 pieces, no abnormalities; ~50% adipose tissue, rep delineated 7.4 Heart Heart - Atrial Appendage 0006631 810 625 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.98664 261420 0.976311 0.989013 0.801953 23564 1 76 0.00357946 272 0 1.08422e+08 0.0233567 1.60937e+06 1.09627e+08 4.43432e+06 23603 5.38555e+07 0 0.174359 0.989013 0.793141 1.08422e+08 0.00458247 2.35337e+07 9.62847e+06 2.359e+07 276 2.37608e+07 1.93356e+07 0.00407976 2.36045e+07 49.8351 0.0146804 0.991386 0 50.0598 GTEX-1445S-1326-SM-DK2JU 1 B1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis Heart Heart - Left Ventricle 0006566 811 624 BP-49214 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1445S-1326-SM-DLIOE 1 B1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis Heart Heart - Left Ventricle 0006566 811 624 BP-49214 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1445S-2426-SM-79ON2 1 B1 2 pieces, 20% fibrovascular tissue, rep delineated 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 841 594 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992319 87145 0.975948 0.991771 0.758893 21944 1 76 0.00332782 125 0 6.22586e+07 0.0237459 412817 6.27752e+07 4.14618e+06 21968 3.09799e+07 0 0.217055 0.991771 0.752648 6.22586e+07 0.00450507 1.36782e+07 6.38063e+06 1.37295e+07 140 1.37235e+07 9.62008e+06 0.00391677 1.36544e+07 49.8738 0.00657612 0.991222 0 50.0934 GTEX-1445S-2926-SM-5O993 1 B1 2 pieces, ~50% nodules of dispersed glandular/ductal elements in bacground connective tissue/muscle/squamous mucosa, good specimen, probably best sampled by TMA/LCM 7.6 Salivary Gland Minor Salivary Gland 0006330 860 575 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.985035 237774 0.973192 0.988649 0.772729 24216 1 76 0.00281857 227 0 8.59438e+07 0.0248989 215432 8.69306e+07 1.09202e+07 24250 4.26272e+07 0 0.200463 0.988649 0.763957 8.59438e+07 0.00416074 1.9381e+07 1.72452e+07 1.93721e+07 205 1.94527e+07 1.42747e+07 0.0034872 1.96083e+07 50.1992 0.00247821 0.992262 0 49.9885 GTEX-1445S-3026-SM-5O9BR 1 B1 2 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 894 541 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4910 04/01/2014 TruSeq.v1 RNASEQ 0.985353 650591 0.958857 0.987926 0.826246 23699 1 76 0.00400433 371 0 1.02823e+08 0.0409181 5.8599e+06 1.04079e+08 4.38349e+06 23718 5.10551e+07 0 0.132611 0.987926 0.81627 1.02823e+08 0.0051785 2.23374e+07 3.05817e+07 2.2791e+07 367 2.2559e+07 9.58476e+06 0.00458988 2.28115e+07 50.2782 0.0563022 0.990499 0 50.5026 GTEX-1445S-3226-SM-5TDE1 1 B1 2 pieces, ~40% neurohypophysis, delineated; rest is adenohypophysis 6.9 Pituitary Pituitary 0000007 897 538 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988435 308828 0.964074 0.991661 0.764752 24530 1 76 0.00232012 135 0 7.16254e+07 0.0356805 258917 7.22277e+07 8.916e+06 24563 3.55891e+07 0 0.199321 0.991661 0.758375 7.16254e+07 0.0040456 1.52327e+07 1.1966e+07 1.53348e+07 150 1.53615e+07 1.22102e+07 0.00318005 1.54313e+07 50.1133 0.00358473 0.994887 0 50.1669 GTEX-144FL-0003-SM-6RBKQ B1 Blood Whole Blood 0013756 973 BP-45613 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/08/2013 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-144FL-0126-SM-5TDC8 0 B1 6 pieces, no dermal fat, squamous epithelium is ~40-50 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 985 547 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989376 373574 0.970953 0.992346 0.803367 24113 1 76 0.00236928 216 0 9.07104e+07 0.0288208 630256 9.14101e+07 1.11414e+07 24137 4.51057e+07 0 0.167586 0.992346 0.797218 9.07104e+07 0.00418289 1.98669e+07 1.56994e+07 2.00295e+07 237 2.0018e+07 1.59237e+07 0.00327337 2.01439e+07 50.1567 0.00689482 0.995317 0 50.2037 GTEX-144FL-0226-SM-5Q5D4 0 B1 2 pieces, fascia is 10-15% total, rep delineated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 991 541 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.968365 193350 0.976159 0.971454 0.794025 23494 1 76 0.00225799 170 0 8.39315e+07 0.0235587 587668 8.63978e+07 1.27622e+07 23527 4.17149e+07 0 0.182134 0.971454 0.771358 8.39315e+07 0.00380401 1.84597e+07 9.01976e+06 1.86432e+07 200 1.86289e+07 1.41791e+07 0.00302854 1.87288e+07 50.1336 0.00680189 0.974543 0 50.2473 GTEX-144FL-0326-SM-5O99O 0 B1 2 pieces, atrophic, interstitial fat/vascular tisssue is ~30-40%, rep delineated 7.7 Muscle Muscle - Skeletal 0011907 992 540 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988603 217268 0.978722 0.992375 0.824312 22373 1 76 0.00215308 219 0 8.50433e+07 0.0210113 551789 8.56967e+07 1.29791e+07 22401 4.22809e+07 0 0.154409 0.992375 0.818027 8.50433e+07 0.00350697 1.87129e+07 1.03464e+07 1.87434e+07 226 1.88143e+07 1.61298e+07 0.00282745 1.89386e+07 50.1645 0.00643886 0.996147 0 50.0407 GTEX-144FL-0426-SM-5O9A1 0 B1 2 pieces, good clean specimens 5.8 Nerve Nerve - Tibial 0001323 1001 531 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988026 258797 0.964024 0.991635 0.721165 24139 1 76 0.00236021 154 0 7.26239e+07 0.0357397 433469 7.32365e+07 9.74838e+06 24179 3.60664e+07 0 0.242859 0.991635 0.715133 7.26239e+07 0.00376816 1.58346e+07 8.51047e+06 1.60087e+07 162 1.60142e+07 9.95412e+06 0.00306162 1.60857e+07 50.1114 0.00591875 0.995243 0 50.2734 GTEX-144FL-0626-SM-5LU43 0 B1 2 pieces, minimal dermal fate; squamous epithelium is ~50-60 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1008 524 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991589 148235 0.978097 0.993572 0.802263 22136 1 76 0.00390707 133 0 6.38716e+07 0.0216773 405672 6.42848e+07 7.28498e+06 22158 3.17994e+07 0 0.175834 0.993572 0.797106 6.38716e+07 0.00388968 1.41331e+07 7.93076e+06 1.41403e+07 138 1.41457e+07 1.15557e+07 0.00389839 1.42545e+07 50.1916 0.00631054 0.995556 0 50.0128 GTEX-144FL-1126-SM-DLIPL 1 B1 2 pieces, no abnormality Heart Heart - Atrial Appendage 0006631 1043 489 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-144FL-1526-SM-5Q5CA 2 B1 2 pieces, moderately advanced autolysis 6.1 Pancreas Pancreas 0001150 1052 480 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991103 179806 0.972267 0.992819 0.793543 22572 1 76 0.00192564 134 0 6.94515e+07 0.0274663 149146 6.99538e+07 4.84902e+06 22598 3.45631e+07 0 0.178724 0.992819 0.787845 6.94515e+07 0.00292262 1.55195e+07 9.98988e+06 1.54841e+07 145 1.55539e+07 1.44972e+07 0.00242327 1.55797e+07 50.0414 0.00213206 0.994536 0 49.943 GTEX-144FL-2326-SM-5LUAC 3 B1 2 pieces, atrophy? infiltrative process, markedly autolyzed 5.7 Thyroid Thyroid 0002046 1079 453 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 EXCLUDE 0.95922 304130 0.952875 0.961328 0.734423 24076 1 76 0.00771315 114 0 6.73769e+07 0.0391575 146573 7.00874e+07 6.15345e+06 24101 3.30344e+07 0 0.218452 0.961328 0.706021 6.73769e+07 0.00701457 1.4895e+07 2.79495e+07 1.48982e+07 128 1.50576e+07 8.44043e+06 0.00736462 1.48889e+07 49.7183 0.00209129 0.963435 0 50.0054 GTEX-144FL-2626-SM-5TDCW 1 B1 6 pieces, target muscularis, good specimen 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 1084 448 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.985052 325603 0.966858 0.989378 0.782951 24569 1 76 0.0025145 273 0 1.01537e+08 0.0329526 1.19841e+06 1.02627e+08 1.35639e+07 24608 5.03758e+07 0 0.183907 0.989378 0.774635 1.01537e+08 0.0046838 2.17165e+07 1.22324e+07 2.20611e+07 298 2.20091e+07 1.34165e+07 0.0035944 2.2188e+07 50.2023 0.0116773 0.993704 0 50.3935 GTEX-144FL-2726-SM-5O98Z 1 B1 6 pieces, squamous mucosa ~120-150 microns, submucosal mucus glands present; rep delineated 6.7 Esophagus Esophagus - Mucosa 0006920 1089 443 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989448 253730 0.972635 0.992396 0.77207 23062 1 76 0.00222835 163 0 7.87416e+07 0.0271813 330353 7.93449e+07 9.94205e+06 23093 3.91627e+07 0 0.200565 0.992396 0.766199 7.87416e+07 0.0036602 1.7553e+07 9.87438e+06 1.76809e+07 179 1.76887e+07 1.26382e+07 0.00294215 1.77761e+07 50.1233 0.00416351 0.995344 0 50.1815 GTEX-144FL-3026-SM-5O99C 1 B1 2 pieces, no abnormalities 6.5 Brain Brain - Cortex 0001870 1122 410 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989431 653794 0.950092 0.992428 0.797115 24716 1 76 0.0025281 202 0 7.75541e+07 0.0496248 3.3535e+06 7.81458e+07 1.11021e+07 24737 3.85703e+07 0 0.152977 0.992428 0.791079 7.75541e+07 0.00394823 1.67086e+07 2.57373e+07 1.6787e+07 218 1.67525e+07 9.70842e+06 0.00323602 1.69733e+07 50.3274 0.0429134 0.995425 0 50.117 GTEX-144FL-3126-SM-5TDCX 1 B1 2 pieces, no abnormalities 7 Brain Brain - Cerebellum 0002037 1125 407 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.985305 735588 0.928146 0.989388 0.715056 25888 1 76 0.00244187 159 0 7.89111e+07 0.0715459 808932 7.97575e+07 9.81776e+06 25925 3.91592e+07 0 0.21309 0.989388 0.707468 7.89111e+07 0.00443773 1.65868e+07 2.53602e+07 1.68052e+07 171 1.68469e+07 1.07738e+07 0.00343568 1.68663e+07 50.0288 0.0101424 0.993471 0 50.327 GTEX-144GL-0011-R11b-SM-5P9F6 C1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 549 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.990316 864186 0.94112 0.990288 0.759255 24314 1 76 0.00299119 372 0 1.08326e+08 0.058526 2.2361e+06 1.09389e+08 3.64926e+06 24352 5.38714e+07 0 0.181865 0.990288 0.751881 1.08326e+08 0.00367116 2.31887e+07 2.51471e+07 2.33721e+07 344 2.32708e+07 1.24576e+07 0.00333119 2.3308e+07 50.0399 0.0204418 0.99026 0 50.197 GTEX-144GL-0011-R1a-SM-5PNZ5 C1, A1 7.3 Brain Brain - Hippocampus 0001954 549 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988857 2.9428e+06 0.904045 0.989422 0.813327 22130 1 76 0.00296732 373 0 1.05211e+08 0.0955821 7.6268e+06 1.06335e+08 3.25767e+06 22147 5.2365e+07 0 0.0907186 0.989422 0.804723 1.05211e+08 0.00343288 2.16354e+07 8.60019e+07 2.20835e+07 342 2.17935e+07 9.58505e+06 0.00319997 2.20353e+07 50.2758 0.0717239 0.989987 0 50.5125 GTEX-144GL-0011-R3a-SM-5P9HP C1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 549 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992066 938881 0.956145 0.992628 0.828592 24725 1 76 0.00296778 273 0 1.20919e+08 0.0434792 8.0376e+06 1.21817e+08 3.74511e+06 24748 6.02614e+07 0 0.127554 0.992628 0.822483 1.20919e+08 0.0032123 2.63374e+07 3.80692e+07 2.64627e+07 319 2.62391e+07 1.289e+07 0.00308997 2.66338e+07 50.3732 0.0659809 0.99319 0 50.1187 GTEX-144GL-0011-R4a-SM-5PNUI C1, A1 6.1 Brain Brain - Amygdala 0001876 549 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991982 582527 0.959977 0.99384 0.825392 20823 1 76 0.00178125 265 0 7.17301e+07 0.0399119 9.80502e+06 7.21748e+07 6.25549e+06 20832 3.57283e+07 0 0.134585 0.99384 0.820308 7.17301e+07 0.00303908 1.53052e+07 3.80841e+07 1.58461e+07 317 1.54084e+07 3.90999e+06 0.00240899 1.58581e+07 50.7191 0.135851 0.995698 0 50.8681 GTEX-144GL-0011-R5b-SM-5PNUJ C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 549 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991848 406971 0.965424 0.993621 0.82681 21358 1 76 0.00174896 197 0 6.53098e+07 0.0344127 6.56458e+06 6.57291e+07 5.825e+06 21367 3.25347e+07 0 0.138614 0.993621 0.821535 6.53098e+07 0.00294522 1.40931e+07 2.89061e+07 1.43481e+07 248 1.41878e+07 4.5943e+06 0.00234602 1.43508e+07 50.2857 0.0998732 0.995393 0 50.4483 GTEX-144GL-0011-R6a-SM-5P9HW C1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 549 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990176 1.04683e+06 0.943561 0.991042 0.78048 24439 1 76 0.00313797 266 0 8.79415e+07 0.0561699 5.35667e+06 8.87364e+07 3.04803e+06 24465 4.37364e+07 0 0.163081 0.991042 0.773489 8.79415e+07 0.0036591 1.88044e+07 3.02025e+07 1.90448e+07 312 1.8897e+07 8.13085e+06 0.00339831 1.90456e+07 50.1959 0.0603661 0.991908 0 50.3175 GTEX-144GL-0011-R7b-SM-5P9HX C1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 549 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992369 682673 0.95597 0.992832 0.812984 22838 1 76 0.00290136 266 0 8.07638e+07 0.0437951 5.95295e+06 8.13469e+07 2.53179e+06 22853 4.02556e+07 0 0.142986 0.992832 0.807156 8.07638e+07 0.00308032 1.7416e+07 3.21278e+07 1.76181e+07 266 1.73755e+07 6.86511e+06 0.0029908 1.7696e+07 50.457 0.0731798 0.993294 0 50.2885 GTEX-144GL-0011-R8a-SM-5Q5B1 C1, A1 6.2 Brain Brain - Hypothalamus 0001898 549 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.984621 885034 0.943111 0.986777 0.855822 21256 1 76 0.00162932 202 0 6.40851e+07 0.0566817 5.77963e+06 6.49438e+07 4.56772e+06 21270 3.1884e+07 0 0.087289 0.986777 0.844506 6.40851e+07 0.0027683 1.3978e+07 2.90974e+07 1.39062e+07 231 1.36711e+07 5.67671e+06 0.00219757 1.43741e+07 51.2534 0.0889944 0.988934 0 49.8712 GTEX-144GL-0126-SM-5TDE2 0 C1 6 pieces; well trimmed; 5-10% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 648 628 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.985525 276117 0.969851 0.989156 0.777398 23301 1 76 0.0023303 165 0 6.83139e+07 0.0298546 251346 6.90628e+07 8.42836e+06 23323 3.39316e+07 0 0.192452 0.989156 0.768969 6.83139e+07 0.00424884 1.47861e+07 7.8375e+06 1.48504e+07 152 1.48963e+07 1.15979e+07 0.00328605 1.49798e+07 50.1397 0.00363938 0.992787 0 50.1084 GTEX-144GL-0226-SM-5QGOX 0 C1 2 pieces; 5% fibrous content 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 651 625 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993212 154130 0.974564 0.994452 0.808978 22670 1 76 0.0019031 153 0 6.72659e+07 0.0251061 264680 6.76412e+07 4.8319e+06 22694 3.35131e+07 0 0.165587 0.994452 0.804489 6.72659e+07 0.002836 1.47086e+07 5.8792e+06 1.48611e+07 159 1.48225e+07 1.22956e+07 0.00236897 1.48317e+07 50.0155 0.003913 0.995692 0 50.2578 GTEX-144GL-0326-SM-5QGOY 0 C1 2 pieces; 10 & 20% internal fat 8 Muscle Muscle - Skeletal 0011907 660 617 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994702 197091 0.981276 0.995618 0.858791 20017 1 76 0.00158093 200 0 8.16043e+07 0.0185336 1.19263e+06 8.19635e+07 5.28433e+06 20029 4.06962e+07 0 0.122485 0.995618 0.855028 8.16043e+07 0.00236262 1.77057e+07 1.01877e+07 1.78507e+07 231 1.76833e+07 1.7042e+07 0.00197142 1.7945e+07 50.3673 0.0145508 0.996534 0 50.2039 GTEX-144GL-0426-SM-5QGOZ 0 C1 2 pieces; 10 & 20 % internal & external fat 7 Nerve Nerve - Tibial 0001323 673 606 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991504 202392 0.963402 0.992753 0.728977 24533 1 76 0.00205787 181 0 7.81501e+07 0.0363608 270202 7.87206e+07 4.94427e+06 24576 3.89226e+07 0 0.234425 0.992753 0.723695 7.81501e+07 0.00301462 1.70907e+07 7.42240e+06 1.72405e+07 179 1.7189e+07 1.13039e+07 0.00253564 1.72367e+07 50.0692 0.00343242 0.994002 0 50.2183 GTEX-144GL-0426-SM-DK2JR 0 C1 2 pieces; 10 & 20 % internal & external fat Nerve Nerve - Tibial 0001323 673 606 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-144GL-0426-SM-DLIOC 0 C1 2 pieces; 10 & 20 % internal & external fat Nerve Nerve - Tibial 0001323 673 606 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10442,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-144GL-0526-SM-5LU41 0 C1 2 pieces; well trimmed; no plaque 7.3 Blood Vessel Artery - Tibial 0007610 674 605 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991959 138277 0.972874 0.993813 0.819822 21185 1 76 0.0037765 121 0 5.77783e+07 0.026786 303827 5.8138e+07 6.87704e+06 21203 2.87653e+07 0 0.153052 0.993813 0.814749 5.77783e+07 0.0037446 1.23799e+07 4.58528e+06 1.24732e+07 125 1.24656e+07 1.10443e+07 0.00376058 1.24907e+07 50.0503 0.00522596 0.995666 0 50.1877 GTEX-144GL-0626-SM-5LU4D 0 C1 6 pieces; well trimmed; 5% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 690 590 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992626 171816 0.978771 0.994306 0.810835 22635 1 76 0.00389001 177 0 7.92469e+07 0.020943 275154 7.97007e+07 9.51908e+06 22661 3.94694e+07 0 0.167936 0.994306 0.806218 7.92469e+07 0.00370876 1.74025e+07 8.84453e+06 1.74452e+07 175 1.74647e+07 1.43485e+07 0.00379954 1.75141e+07 50.0705 0.00345234 0.995985 0 50.0613 GTEX-144GL-0726-SM-5LU4P 1 C1 2 pieces; active spermatogenesis 6.1 Testis Testis 0000473 704 577 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.99139 250903 0.925991 0.99302 0.713143 33013 1 76 0.00380374 150 0 7.81475e+07 0.073694 659696 7.86968e+07 8.99219e+06 33073 3.89201e+07 0 0.212848 0.99302 0.708166 7.81475e+07 0.00360452 1.62158e+07 1.11169e+07 1.61897e+07 147 1.62288e+07 1.24595e+07 0.00370429 1.62947e+07 50.1013 0.00838275 0.994651 0 49.9597 GTEX-144GL-1026-SM-5O99R 0 C1 2 pieces; 20% fibrofatty content in 1; hypereosinophilia (ischemic) in other [labeled] 5.7 Heart Heart - Atrial Appendage 0006631 745 537 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989262 218359 0.97521 0.992719 0.823823 22365 1 76 0.00199276 191 0 7.44103e+07 0.0245564 4.56206e+06 7.49561e+07 1.02445e+07 22382 3.69937e+07 0 0.151387 0.992719 0.817825 7.44103e+07 0.0035893 1.62172e+07 1.13503e+07 1.6183e+07 208 1.61596e+07 1.04042e+07 0.00278825 1.64734e+07 50.4808 0.0608631 0.996176 0 49.9473 GTEX-144GL-1226-SM-5O9A4 1 C1 2 pieces 6.7 Thyroid Thyroid 0002046 749 534 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.985895 335402 0.960664 0.990246 0.692316 25247 1 76 0.00234968 158 0 8.43757e+07 0.0390636 534046 8.52068e+07 1.20489e+07 25294 4.18683e+07 0 0.268348 0.990246 0.685563 8.43757e+07 0.00391056 1.82047e+07 1.05438e+07 1.84066e+07 182 1.84943e+07 1.07615e+07 0.00312669 1.8466e+07 49.9617 0.00626764 0.994596 0 50.2757 GTEX-144GL-1426-SM-79OMA 1 C1 2 pieces; 20% macrovesicular steatosis 6.4 Liver Liver 0001114 750 534 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992701 303034 0.961993 0.993214 0.80871 20812 1 76 0.00290464 147 0 6.3735e+07 0.0379159 3.02044e+06 6.41704e+07 3.55016e+06 20832 3.17613e+07 0 0.153284 0.993214 0.803222 6.3735e+07 0.00413399 1.38768e+07 1.54933e+07 1.42061e+07 184 1.41481e+07 5.86437e+06 0.003519 1.39573e+07 49.6606 0.0470691 0.993728 0 50.5862 GTEX-144GL-1826-SM-79OMB 1 C1 2 pieces; well trimmed 6.3 Adrenal Gland Adrenal Gland 0002369 759 527 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992455 403568 0.952504 0.992648 0.776485 21401 1 76 0.00303217 125 0 5.91223e+07 0.0473115 3.20311e+06 5.95602e+07 3.4973e+06 21422 2.94436e+07 0 0.176019 0.992648 0.770777 5.91223e+07 0.00436914 1.26759e+07 1.46542e+07 1.28996e+07 151 1.28817e+07 6.63622e+06 0.00370053 1.27108e+07 49.666 0.0537794 0.992841 0 50.4373 GTEX-144GL-2026-SM-5LU3O 0 C1 2 pieces; 5% fibrous content in 1; no ducts 5.9 Breast Breast - Mammary Tissue 0008367 764 524 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.975942 274037 0.966023 0.977847 0.779084 23184 1 76 0.00416343 142 0 7.11024e+07 0.0336671 453161 7.27132e+07 8.35706e+06 23207 3.53364e+07 0 0.186939 0.977847 0.761825 7.11024e+07 0.00417451 1.55105e+07 1.16324e+07 1.55567e+07 160 1.55428e+07 1.07306e+07 0.00416896 1.56621e+07 50.1911 0.00623217 0.979751 0 50.0745 GTEX-144GL-2226-SM-79OMD 1 C1 6 pieces; very well trimmed 6.1 Esophagus Esophagus - Muscularis 0004648 769 520 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.989446 95796 0.967729 0.98909 0.833619 22059 1 76 0.00308482 153 0 6.33099e+07 0.0321166 2.40421e+06 6.40082e+07 4.3493e+06 22079 3.15041e+07 0 0.13411 0.98909 0.824524 6.33099e+07 0.00438999 1.3808e+07 6.1878e+06 1.40287e+07 181 1.39463e+07 7.29762e+06 0.00373764 1.38655e+07 49.8548 0.037561 0.988734 0 50.3965 GTEX-144GL-2526-SM-5TDDL 3 C1 6 pieces; mucosa totally autolyzed, muscle preserved 5.7 Colon Colon - Transverse 0001157 780 511 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.983099 199262 0.965884 0.987241 0.803534 23829 1 76 0.00319144 125 0 5.78161e+07 0.03069 708525 5.85633e+07 6.86088e+06 23847 2.85765e+07 0 0.16235 0.987241 0.793281 5.78161e+07 0.00543035 1.25656e+07 8.21640e+06 1.26315e+07 143 1.26625e+07 8.66111e+06 0.0043062 1.2766e+07 50.2036 0.0120985 0.991382 0 50.1308 GTEX-144GL-2926-SM-5O99F 1 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 800 493 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988042 602898 0.93893 0.991588 0.729213 24068 1 76 0.00228716 199 0 8.10653e+07 0.0607641 2.12235e+06 8.1753e+07 1.09694e+07 24099 4.0283e+07 0 0.209717 0.991588 0.723079 8.10653e+07 0.00386813 1.733e+07 2.58249e+07 1.74731e+07 224 1.75087e+07 8.76794e+06 0.00307482 1.75652e+07 50.0806 0.0259605 0.995135 0 50.2056 GTEX-144GL-3026-SM-5Q5CW 1 C1 4 pieces 6.7 Brain Brain - Cortex 0001870 803 490 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989189 432130 0.960972 0.99175 0.82885 24254 1 76 0.00204522 269 0 9.67626e+07 0.0386712 5.41556e+06 9.75676e+07 1.3086e+07 24272 4.81453e+07 0 0.132122 0.99175 0.822012 9.67626e+07 0.00358817 2.12715e+07 2.34342e+07 2.12664e+07 321 2.1181e+07 1.10512e+07 0.0028147 2.15767e+07 50.4627 0.0555057 0.99431 0 49.994 GTEX-144GL-3126-SM-5TDDM 1 C1 1 piece; anterior present 6.7 Pituitary Pituitary 0000007 804 490 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988668 586667 0.939144 0.991717 0.742003 25017 1 76 0.00231083 138 0 7.02504e+07 0.0606403 456387 7.08372e+07 8.43582e+06 25053 3.49063e+07 0 0.197141 0.991717 0.735857 7.02504e+07 0.00436656 1.38191e+07 2.33516e+07 1.40347e+07 157 1.40388e+07 1.04428e+07 0.00333554 1.40292e+07 49.9829 0.00644276 0.994765 0 50.3871 GTEX-144GM-0126-SM-5Q5AX 1 B1 2 pieces, diffuse acute pneumonia, focally necrotizing 7.9 Lung Lung 0008952 166 688 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989631 174227 0.974992 0.992341 0.785471 22874 1 76 0.00185279 141 0 6.75263e+07 0.0246791 192536 6.80475e+07 5.50302e+06 22897 3.35868e+07 0 0.189521 0.992341 0.779455 6.75263e+07 0.00290937 1.48682e+07 7.01254e+06 1.50309e+07 154 1.50255e+07 1.18328e+07 0.00237964 1.50534e+07 50.0464 0.00282944 0.99505 0 50.2721 GTEX-144GM-0226-SM-5Q5CB 1 B1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 178 676 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989807 185763 0.97146 0.991747 0.800441 22513 1 76 0.00167207 136 0 6.4872e+07 0.0282873 263560 6.54118e+07 4.78881e+06 22531 3.22788e+07 0 0.171019 0.991747 0.793834 6.4872e+07 0.00269388 1.42966e+07 7.91219e+06 1.43375e+07 160 1.4284e+07 1.05978e+07 0.00218198 1.44768e+07 50.3351 0.00402924 0.993686 0 50.0714 GTEX-144GM-0226-SM-DK2JT 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 178 676 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-144GM-0226-SM-DLL3K 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 178 676 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10443 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-144GM-0226-SM-E9IK3 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 178 676 BP-49188 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-10755 04/03/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-144GM-0426-SM-5Q5C8 1 B1 2 pieces, robust spermatogenesis 9.3 Testis Testis 0000473 192 662 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988419 338333 0.929117 0.991118 0.736684 32529 1 76 0.00179791 182 0 8.73185e+07 0.0705177 566146 8.8101e+07 7.15929e+06 32579 4.34447e+07 0 0.192433 0.991118 0.730141 8.73185e+07 0.00276736 1.81121e+07 1.63687e+07 1.81851e+07 200 1.82433e+07 1.52897e+07 0.00228132 1.82687e+07 50.0348 0.0064261 0.993818 0 50.1006 GTEX-144GM-0526-SM-79OJO 0 B1 6 pieces, no dermal fat; squamous epithelium is ~ 40-50 microns 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 201 653 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975909 170166 0.972971 0.979801 0.814096 22309 1 76 0.00508345 147 0 5.76351e+07 0.0268345 320128 5.88233e+07 1.41642e+07 22325 2.86815e+07 0 0.158875 0.979801 0.797652 5.76351e+07 0.00632766 1.25933e+07 6.86707e+06 1.26936e+07 131 1.27475e+07 9.78184e+06 0.00570308 1.27548e+07 50.0143 0.0054422 0.983692 0 50.1983 GTEX-144GM-0626-SM-79OKY 1 B1 2 pieces, prominent fascia/connective tissue, ~30% 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 203 651 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.981053 211637 0.977456 0.984578 0.83141 22505 1 76 0.00470862 134 0 6.57424e+07 0.0222718 414742 6.67722e+07 1.49621e+07 22523 3.27218e+07 0 0.146045 0.984578 0.818588 6.57424e+07 0.00581658 1.45083e+07 6.58651e+06 1.46455e+07 146 1.47244e+07 1.18206e+07 0.00526061 1.46449e+07 49.8646 0.0062113 0.988103 0 50.2353 GTEX-144GM-0726-SM-79OJQ 1 B1 2 pieces, well- perserved, Islets well visualize; rep delineated 6.8 Pancreas Pancreas 0001150 216 638 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.97629 219581 0.978279 0.980106 0.816044 20610 1 76 0.0051899 101 0 6.29188e+07 0.0213852 164750 6.41959e+07 1.48484e+07 20623 3.13022e+07 0 0.162235 0.980106 0.79981 6.29188e+07 0.00650576 1.4313e+07 1.29927e+07 1.45133e+07 105 1.45676e+07 1.6623e+07 0.00584527 1.44937e+07 49.8729 0.00256636 0.983922 0 50.3475 GTEX-144GM-0826-SM-5O98R 1 B1 2 pieces, no abnormalities 6.9 Prostate Prostate 0002367 227 627 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989139 460637 0.954917 0.99231 0.753569 23499 1 76 0.00204287 159 0 7.43564e+07 0.0448803 564018 7.49327e+07 8.72584e+06 23528 3.69788e+07 0 0.201348 0.99231 0.747773 7.43564e+07 0.00353365 1.60815e+07 2.34838e+07 1.62289e+07 188 1.62238e+07 9.30053e+06 0.00278588 1.63116e+07 50.135 0.007527 0.995481 0 50.228 GTEX-144GM-0926-SM-5O994 1 B1 2 pieces, fibroadipose tissues/stroma; no ductal elements 7.9 Breast Breast - Mammary Tissue 0008367 235 619 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.991025 253173 0.977644 0.993645 0.82893 22340 1 76 0.00196095 275 0 9.32825e+07 0.0220491 1.06908e+06 9.3879e+07 1.11407e+07 22370 4.64189e+07 0 0.148714 0.993645 0.823662 9.32825e+07 0.00331173 2.04714e+07 1.11989e+07 2.06408e+07 301 2.05529e+07 1.55703e+07 0.00263456 2.07889e+07 50.2854 0.0113879 0.996266 0 50.206 GTEX-144GM-1026-SM-79OKU 1 B1 6 pieces, lymphoid aggregates are ~20-30%, good specimen 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 245 609 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.979399 196479 0.972151 0.982978 0.756583 23440 1 76 0.00470836 117 0 5.89387e+07 0.0274913 505811 5.99594e+07 1.26394e+07 23471 2.93172e+07 0 0.215568 0.982978 0.743704 5.89387e+07 0.00586829 1.30463e+07 7.3952e+06 1.31877e+07 127 1.32491e+07 8.26027e+06 0.00528621 1.31799e+07 49.869 0.0084359 0.986558 0 50.2695 GTEX-144GM-1126-SM-79OJK 1 B1 6 pieces, target muscularis, good specimens, incdidental lymph nodes encircled (rep) 6.8 Colon Colon - Sigmoid 0001159 257 597 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.981659 159475 0.975775 0.985027 0.81055 21922 1 76 0.00453305 121 0 5.87468e+07 0.0239816 380933 5.96398e+07 1.28379e+07 21942 2.9245e+07 0 0.165225 0.985027 0.798413 5.87468e+07 0.00560116 1.28069e+07 6.16514e+06 1.29636e+07 133 1.29856e+07 9.53831e+06 0.00506528 1.29674e+07 49.9649 0.00638723 0.988395 0 50.304 GTEX-144GM-1226-SM-5LU52 1 B1 6 pieces, mucosa well-preserved, ~0.5mm, ~15% thickness 7.9 Colon Colon - Transverse 0001157 252 602 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.98975 200049 0.976068 0.991537 0.812727 22345 1 76 0.00400978 177 0 7.05943e+07 0.0220124 852796 7.11969e+07 8.27586e+06 22368 3.5088e+07 0 0.16334 0.991537 0.805849 7.05943e+07 0.00385233 1.58457e+07 1.00735e+07 1.57423e+07 169 1.57701e+07 1.11723e+07 0.0039312 1.59339e+07 50.2583 0.011978 0.993324 0 49.8364 GTEX-144GM-1326-SM-5LU5E 1 B1 2 pieces, no abnormalities 7.3 Liver Liver 0001114 265 589 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993655 249171 0.979039 0.995168 0.865471 19378 1 76 0.00345491 155 0 7.90252e+07 0.0196256 567210 7.94088e+07 9.06297e+06 19388 3.93457e+07 0 0.113567 0.995168 0.86129 7.90252e+07 0.00311965 1.74348e+07 1.47929e+07 1.73155e+07 182 1.73433e+07 1.69373e+07 0.00328753 1.75209e+07 50.2546 0.00714291 0.996682 0 49.8282 GTEX-144GM-1426-SM-5LU31 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~20% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 282 572 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991761 284167 0.977112 0.993663 0.821461 22747 1 76 0.00368951 180 0 8.5715e+07 0.022393 372986 8.62617e+07 9.93666e+06 22773 4.26698e+07 0 0.15565 0.993663 0.816256 8.5715e+07 0.00369147 1.92915e+07 1.08054e+07 1.93695e+07 192 1.93835e+07 1.67677e+07 0.00369049 1.94403e+07 50.0731 0.00432389 0.995564 0 50.1009 GTEX-144GM-1526-SM-79OJM 1 B1 6 pieces, target muscularis, good specimens 6.1 Esophagus Esophagus - Muscularis 0004648 289 565 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.978409 200624 0.974753 0.982127 0.8006 21718 1 76 0.00497319 129 0 6.35223e+07 0.0250542 589448 6.46783e+07 1.52146e+07 21741 3.16146e+07 0 0.174153 0.982127 0.786291 6.35223e+07 0.00611085 1.37975e+07 7.04823e+06 1.39305e+07 145 1.3987e+07 9.03991e+06 0.00553987 1.39535e+07 49.9402 0.00911354 0.985846 0 50.2398 GTEX-144GM-1626-SM-5O9AG 1 B1 6 pieces, target muscularis, good specimens 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 293 561 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988495 189329 0.977984 0.99249 0.840254 21336 1 76 0.00190178 164 0 7.0293e+07 0.0217376 374977 7.08249e+07 9.22447e+06 21351 3.49392e+07 0 0.137731 0.99249 0.833944 7.0293e+07 0.00327626 1.51001e+07 6.58414e+06 1.51578e+07 173 1.51957e+07 1.31117e+07 0.00258625 1.53177e+07 50.1999 0.00529443 0.996485 0 50.0953 GTEX-144GM-1726-SM-5O9AS 1 B1 6 pieces, mucosa well -preserved, 30-50% thickness, in some areas up to 1.3mm thick...focal deep glandular dilations, unknown etiology 7.4 Stomach Stomach 0000945 300 554 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.981952 180596 0.983858 0.98555 0.845359 21144 1 76 0.001934 288 0 7.98436e+07 0.0158855 1.3409e+06 8.10142e+07 1.13964e+07 21161 3.9698e+07 0 0.138499 0.98555 0.833143 7.98436e+07 0.00340626 1.83106e+07 8.92359e+07 1.83188e+07 247 1.83799e+07 1.80058e+07 0.00266744 1.8517e+07 50.1858 0.0165514 0.989148 0 50.0112 GTEX-144GM-1926-SM-5LUAN 0 B1 2 pieces, ~10% vascular/connective tissue, delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 351 503 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991616 246144 0.975612 0.993471 0.808776 21169 1 76 0.00436404 119 0 5.50407e+07 0.0241092 329303 5.54024e+07 4.7755e+06 21181 2.73769e+07 0 0.166837 0.993471 0.803495 5.50407e+07 0.00354766 1.2091e+07 5.66064e+06 1.21257e+07 125 1.21161e+07 9.31077e+06 0.00395661 1.2202e+07 50.1767 0.00594384 0.995326 0 50.0717 GTEX-144GM-2026-SM-5LU3D 0 B1 2 pieces, trace interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 353 501 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993902 152624 0.986075 0.995351 0.877817 19274 1 76 0.00331405 280 0 8.85429e+07 0.0137304 968751 8.89565e+07 1.06665e+07 19283 4.41433e+07 0 0.108258 0.995351 0.873735 8.85429e+07 0.00304557 1.95047e+07 1.23598e+07 1.92513e+07 262 1.92502e+07 1.66991e+07 0.00318001 1.96338e+07 50.4933 0.0108902 0.996799 0 49.6731 GTEX-144GM-2126-SM-5LU3P 0 B1 2 pieces, excellent clean specimen 7 Nerve Nerve - Tibial 0001323 356 498 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992466 176293 0.973561 0.994328 0.780563 23323 1 76 0.00368054 174 0 8.04343e+07 0.0261579 248846 8.08931e+07 9.88556e+06 23356 4.00513e+07 0 0.192998 0.994328 0.776135 8.04343e+07 0.00368318 1.7717e+07 7.07937e+06 1.78294e+07 178 1.78255e+07 1.35851e+07 0.00368186 1.78665e+07 50.0573 0.00307623 0.996191 0 50.1581 GTEX-144GM-2226-SM-5O9B5 0 B1 2 pieces, excellent clean specimen 7 Blood Vessel Artery - Tibial 0007610 358 496 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988697 192131 0.978605 0.992248 0.864875 19697 1 76 0.00190249 138 0 6.4137e+07 0.0210306 206372 6.4638e+07 8.43229e+06 19705 3.1871e+07 0 0.11373 0.992248 0.858171 6.4137e+07 0.00354858 1.38096e+07 5.55413e+06 1.38933e+07 150 1.38865e+07 1.41333e+07 0.00272259 1.40353e+07 50.2665 0.00319273 0.995799 0 50.151 GTEX-144GM-5016-SM-AN41A B1 Muscle Muscle - Skeletal 0011907 354 ChIP-Seq GTEX-144GN-0226-SM-G8OXN 1 B1 2 pieces; well dissected with little non-muscle tissue Heart Heart - Atrial Appendage 0006631 181 522 BP-49214 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2014 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-144GN-0326-SM-5O9AD 1 B1 6 pieces; no plaques; fatty periaortic tissue up to 0.6mm thick on all 8.3 Blood Vessel Artery - Aorta 0001496 183 520 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.990259 213914 0.977884 0.99318 0.851337 21279 1 76 0.00193806 131 0 5.64429e+07 0.0216959 135712 5.68305e+07 6.95217e+06 21288 2.80695e+07 0 0.126547 0.99318 0.845531 5.64429e+07 0.00343671 1.23207e+07 4.28453e+06 1.24193e+07 133 1.24334e+07 1.17481e+07 0.00268518 1.24673e+07 50.0682 0.00238801 0.996101 0 50.1993 GTEX-144GN-0426-SM-5O9AP 1 B1 2 pieces; extensive bronchopneumonia and foci of pigmented macrophages; bronchiectasis & emphysema 8.9 Lung Lung 0008952 186 517 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.98778 201238 0.975671 0.991673 0.830399 23812 1 76 0.00214615 146 0 6.77272e+07 0.0239109 292489 6.82959e+07 9.83933e+06 23834 3.36547e+07 0 0.145272 0.991673 0.823484 6.77272e+07 0.00366115 1.50223e+07 6.49648e+06 1.51164e+07 153 1.51605e+07 1.36167e+07 0.00290068 1.52359e+07 50.1241 0.00428267 0.995566 0 50.1563 GTEX-144GN-0626-SM-5O9B2 1 B1 6 pieces; moderate chronic esophagitis 8.9 Esophagus Esophagus - Mucosa 0006920 201 502 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.990218 203274 0.97755 0.993153 0.835419 22435 1 76 0.00206218 176 0 8.06452e+07 0.0221412 397183 8.12012e+07 1.09366e+07 22453 4.01246e+07 0 0.142131 0.993153 0.829699 8.06452e+07 0.003396 1.81408e+07 1.05398e+07 1.81866e+07 196 1.82042e+07 1.62532e+07 0.00272712 1.83572e+07 50.2092 0.00489134 0.996088 0 50.0631 GTEX-144GN-0726-SM-5O98O 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 203 500 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.990655 208299 0.976159 0.993627 0.825048 22804 1 76 0.0019343 209 0 7.79849e+07 0.0236154 532098 7.8485e+07 9.43424e+06 22821 3.87992e+07 0 0.15111 0.993627 0.819791 7.79849e+07 0.00332957 1.71717e+07 9.47903e+06 1.72270e+07 209 1.72047e+07 1.32536e+07 0.00262985 1.74154e+07 50.3043 0.00677961 0.9966 0 50.0804 GTEX-144GN-0826-SM-5LU5G 1 B1 2 pieces; numerous islets; 50% external fat, 10% internal fat 8.1 Pancreas Pancreas 0001150 205 498 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.988682 558725 0.967259 0.991562 0.838295 21926 1 76 0.00388478 121 0 7.18574e+07 0.0325621 181324 7.24688e+07 8.94794e+06 21946 3.57275e+07 0 0.128964 0.991562 0.831222 7.18574e+07 0.00434962 1.61392e+07 1.90134e+07 1.6321e+07 124 1.63112e+07 1.86711e+07 0.00411652 1.63618e+07 50.0776 0.0025021 0.994443 0 50.28 GTEX-144GN-1126-SM-5LU33 1 B1 6 pieces; 1.5mm hemorrhagic ulcer in 1 piece with 2.6mm inflamed hemorrhagic luminal debris 8.5 Colon Colon - Transverse 0001157 213 490 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.991808 237290 0.97373 0.99342 0.812331 25043 1 76 0.00382285 294 0 1.00875e+08 0.0255599 634747 1.01543e+08 1.25801e+07 25082 5.02335e+07 0 0.161399 0.99342 0.806986 1.00875e+08 0.00358163 2.25271e+07 1.2143e+07 2.2544e+07 272 2.2527e+07 1.78895e+07 0.00370243 2.26976e+07 50.1887 0.00625099 0.995032 0 50.0187 GTEX-144GN-1226-SM-5O991 1 B1 6 pieces; well preserved and sampled 7 Stomach Stomach 0000945 217 486 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987163 171540 0.977707 0.990227 0.823379 22298 1 76 0.00197232 274 0 6.8239e+07 0.0220249 805082 6.89125e+07 8.33763e+06 22313 3.3938e+07 0 0.154328 0.990227 0.815332 6.8239e+07 0.00354196 1.5539e+07 5.25397e+07 1.55787e+07 200 1.55768e+07 1.52514e+07 0.00275471 1.57509e+07 50.2778 0.0116827 0.993292 0 50.0637 GTEX-144GN-1626-SM-5Q5BU 1 B1 2 pieces; active spermatogenesis 6 Testis Testis 0000473 230 473 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98631 247284 0.938309 0.989276 0.758652 31499 1 76 0.00188232 146 0 6.82884e+07 0.0613801 739227 6.90287e+07 5.04349e+06 31544 3.39563e+07 0 0.179656 0.989276 0.750517 6.82884e+07 0.00294041 1.43732e+07 9.53544e+06 1.44174e+07 151 1.44606e+07 1.11332e+07 0.00240978 1.45142e+07 50.0926 0.010709 0.992242 0 50.0767 GTEX-144GN-2126-SM-5O99D 1 B1 2 pieces; increased polymorphs (could be related to pneumonia; no blood congestion 6.7 Spleen Spleen 0002106 171 532 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.98853 423011 0.96118 0.99188 0.792348 24347 1 76 0.00233524 207 0 8.87568e+07 0.0382566 465721 8.94834e+07 1.15623e+07 24375 4.40991e+07 0 0.168832 0.99188 0.785915 8.87568e+07 0.00403175 1.93433e+07 1.4677e+07 1.95283e+07 220 1.95473e+07 1.42651e+07 0.00318063 1.96197e+07 50.0924 0.00520455 0.99523 0 50.2381 GTEX-144GN-2326-SM-5LU4F 0 B1 6 pieces; well trimmed, but 1; 10% dermal fat 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 251 452 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992151 171195 0.974989 0.994179 0.818302 22903 1 76 0.00368175 139 0 6.24866e+07 0.0247839 361511 6.28525e+07 7.34322e+06 22922 3.11177e+07 0 0.156687 0.994179 0.813539 6.24866e+07 0.00375116 1.38297e+07 6.29682e+06 1.38733e+07 145 1.385e+07 1.06906e+07 0.00371638 1.3979e+07 50.2318 0.00575174 0.996206 0 50.0788 GTEX-144GN-2426-SM-5LU4R 1 B1 2 pieces; 20% fibrous tissue at 1 edge 8.2 Muscle Muscle - Skeletal 0011907 257 446 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.993775 200369 0.983945 0.995381 0.881011 19588 1 76 0.00339997 204 0 8.13353e+07 0.015823 1.08837e+06 8.17128e+07 9.7067e+06 19595 4.05367e+07 0 0.102934 0.995381 0.876942 8.13353e+07 0.00325413 1.7867e+07 1.01857e+07 1.77278e+07 233 1.76896e+07 1.54344e+07 0.00332717 1.80319e+07 50.4792 0.0133195 0.996988 0 49.8045 GTEX-144GN-2526-SM-5LU54 1 B1 2 pieces; well trimmed; 10% internal fat 7.5 Nerve Nerve - Tibial 0001323 258 445 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4824 03/23/2014 TruSeq.v1 RNASEQ 0.992274 184341 0.972399 0.993945 0.775066 23146 1 76 0.00367717 144 0 6.65789e+07 0.0273383 161099 6.69845e+07 6.87424e+06 23175 3.31569e+07 0 0.197333 0.993945 0.770373 6.65789e+07 0.00346351 1.4722e+07 5.89609e+06 1.47884e+07 143 1.4786e+07 1.14566e+07 0.00357052 1.48329e+07 50.0792 0.00240502 0.995617 0 50.1124 GTEX-144GN-5001-SM-AN3ZY B1 Heart Heart - Left Ventricle 0006566 178 ChIP-Seq GTEX-144GO-0011-R1a-SM-5PNWO C1, A1 6.1 Brain Brain - Hippocampus 0001954 1195 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991162 406636 0.967635 0.993078 0.835492 19871 1 76 0.00208632 259 0 6.67272e+07 0.032262 7.51237e+06 6.71923e+07 5.99758e+06 19878 3.32324e+07 0 0.132143 0.993078 0.829708 6.67272e+07 0.00329224 1.43663e+07 3.42611e+07 1.46853e+07 257 1.43671e+07 3.57485e+06 0.00268812 1.47978e+07 50.7384 0.111804 0.994993 0 50.549 GTEX-144GO-0011-R5a-SM-5PNUR C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 1195 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991618 1.10748e+06 0.941322 0.99354 0.788629 23699 1 76 0.00193498 267 0 8.26181e+07 0.0583873 4.30095e+06 8.31553e+07 8.06598e+06 23721 4.11514e+07 0 0.152693 0.99354 0.783534 8.26181e+07 0.00294145 1.74871e+07 4.84858e+07 1.76815e+07 274 1.75529e+07 8.22404e+06 0.00243724 1.77718e+07 50.3097 0.051722 0.995462 0 50.2764 GTEX-144GO-0011-R6b-SM-5S2V7 C1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1195 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990745 1.08617e+06 0.936643 0.993141 0.815479 23000 1 76 0.001937 267 0 7.67813e+07 0.0631505 4.01275e+06 7.73116e+07 7.71681e+06 23016 3.82108e+07 0 0.121164 0.993141 0.809885 7.67813e+07 0.00298523 1.63425e+07 3.5164e+07 1.65375e+07 271 1.63694e+07 7.30696e+06 0.00245985 1.67123e+07 50.5184 0.0519035 0.995536 0 50.2966 GTEX-144GO-0011-R7b-SM-5S2TT C1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1195 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.987732 1.16608e+06 0.947893 0.991474 0.818319 20506 1 76 0.00199465 368 0 8.71729e+07 0.0519824 8.95638e+06 8.79225e+07 9.02238e+06 20517 4.33354e+07 0 0.129574 0.991474 0.811342 8.71729e+07 0.00338799 1.85776e+07 6.08743e+07 1.8633e+07 368 1.82695e+07 4.52738e+06 0.00268869 1.92749e+07 51.339 0.101867 0.995216 0 50.0744 GTEX-144GO-0126-SM-5LUAO 2 C1 2 pieces; attached thin rim of skeletal muscle (outlined); interstitial fibrosis 6.1 Thyroid Thyroid 0002046 1286 1159 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990981 204522 0.968059 0.992765 0.815798 22887 1 76 0.00448821 125 0 5.90369e+07 0.0316148 131675 5.94672e+07 5.06381e+06 22907 2.93592e+07 0 0.152261 0.992765 0.809896 5.90369e+07 0.00372001 1.29184e+07 6.16897e+06 1.29897e+07 128 1.29907e+07 1.13231e+07 0.0041048 1.30251e+07 50.0662 0.00221425 0.99455 0 50.1376 GTEX-144GO-0126-SM-EZ6XU 2 C1 2 pieces; attached thin rim of skeletal muscle (outlined); interstitial fibrosis Thyroid Thyroid 0002046 1286 1159 BP-49799 DNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-144GO-0226-SM-5LUB1 2 C1 2 pieces; congestion, some emphysematous change, includes few larger vessels 6.8 Lung Lung 0008952 1288 1158 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.98974 342335 0.964301 0.991896 0.734729 22525 1 76 0.00477413 122 0 6.10721e+07 0.0353341 225275 6.15711e+07 5.36488e+06 22553 3.03476e+07 0 0.229572 0.991896 0.728774 6.10721e+07 0.00400932 1.33985e+07 1.20797e+07 1.34934e+07 127 1.35018e+07 9.14295e+06 0.00439256 1.3521e+07 50.0356 0.00365878 0.994051 0 50.1764 GTEX-144GO-1326-SM-5Q5EL 1 C1 2 pieces; 5% and 20% internal fat and nerve, some atrophy 8.2 Muscle Muscle - Skeletal 0011907 1308 1144 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990816 166819 0.978418 0.993698 0.861732 20339 1 76 0.00193766 173 0 7.78015e+07 0.0213355 503197 7.82949e+07 1.04774e+07 20353 3.87082e+07 0 0.116686 0.993698 0.856301 7.78015e+07 0.0034611 1.68732e+07 8.12189e+06 1.70112e+07 183 1.70187e+07 1.70166e+07 0.00269717 1.70758e+07 50.0838 0.00642695 0.99658 0 50.2036 GTEX-144GO-1626-SM-7EPG5 1 C1 2 pieces; ~10-20% fibrovascular tissue and nerve 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1311 1144 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.984351 240650 0.973482 0.986618 0.830343 22079 1 76 0.00297614 140 0 8.58871e+07 0.0261932 534904 8.70521e+07 1.16224e+07 22099 4.27665e+07 0 0.143139 0.986618 0.819231 8.58871e+07 0.0115793 1.87598e+07 1.30399e+07 1.89102e+07 150 1.89416e+07 1.81796e+07 0.00726785 1.89179e+07 49.9687 0.00614464 0.988885 0 50.1995 GTEX-144GO-2026-SM-5O99P 1 C1 6 pieces; up to 40% attached and internal fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1318 1140 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989814 191755 0.974912 0.992631 0.806548 22651 1 76 0.00217439 142 0 6.37393e+07 0.0248466 323165 6.42125e+07 7.89356e+06 22677 3.1698e+07 0 0.168364 0.992631 0.800604 6.37393e+07 0.00362501 1.40818e+07 7.85315e+06 1.41873e+07 148 1.41973e+07 1.17137e+07 0.00289764 1.4252e+07 50.0962 0.00503274 0.995447 0 50.1865 GTEX-144GO-2726-SM-5O9A2 2 C1 6 pieces; few dilated glands, squamous epithelium incomplete, focal ulceration 5.8 Esophagus Esophagus - Mucosa 0006920 1355 1108 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988061 199688 0.972764 0.99198 0.820896 23154 1 76 0.00212261 133 0 6.05566e+07 0.0269415 703124 6.10462e+07 7.41549e+06 23171 3.00747e+07 0 0.151868 0.99198 0.814312 6.05566e+07 0.00391441 1.34639e+07 6.5338e+06 1.34918e+07 150 1.35015e+07 1.0286e+07 0.00301497 1.36867e+07 50.3406 0.0115179 0.9959 0 50.0517 GTEX-145LS-0011-R10a-SM-5PNUQ C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 767 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992621 954835 0.950795 0.994316 0.812664 24876 1 76 0.00190554 271 0 1.08288e+08 0.0487353 5.72641e+06 1.08907e+08 9.84129e+06 24904 5.39376e+07 0 0.138131 0.994316 0.808045 1.08288e+08 0.00287142 2.33592e+07 3.58046e+07 2.35241e+07 326 2.35214e+07 1.282e+07 0.00238766 2.35378e+07 50.0174 0.0525805 0.996011 0 50.1759 GTEX-145LS-0011-R1b-SM-5PNUP C1, A1 6.5 Brain Brain - Hippocampus 0001954 767 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.991605 1.03065e+06 0.937522 0.993474 0.797803 23227 1 76 0.00194509 203 0 7.17836e+07 0.0621679 5.86998e+06 7.22552e+07 6.60347e+06 23246 3.57502e+07 0 0.139719 0.993474 0.792596 7.17836e+07 0.00298124 1.54111e+07 3.61483e+07 1.55749e+07 233 1.54642e+07 7.08753e+06 0.00246219 1.56619e+07 50.3177 0.0812396 0.995342 0 50.2643 GTEX-145LS-0011-R2a-SM-5PNZI C1, A1 7.2 Brain Brain - Substantia nigra 0002038 767 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991524 465263 0.963396 0.992275 0.827481 24563 1 76 0.0030883 274 0 8.97241e+07 0.0362807 6.41349e+06 9.04226e+07 2.55752e+06 24584 4.46848e+07 0 0.135916 0.992275 0.821088 8.97241e+07 0.00354332 1.97903e+07 1.48127e+07 2.0133e+07 298 1.99457e+07 1.08716e+07 0.00331564 2.00455e+07 50.1248 0.0709279 0.993025 0 50.4292 GTEX-145LS-0011-R3a-SM-5S2VJ C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 767 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991942 752664 0.949063 0.994082 0.828793 23130 1 76 0.00190624 198 0 6.91982e+07 0.0506415 4.39813e+06 6.96102e+07 6.54262e+06 23146 3.44388e+07 0 0.12027 0.994082 0.823888 6.91982e+07 0.00309616 1.50286e+07 2.22367e+07 1.50672e+07 222 1.49674e+07 7.15529e+06 0.00249992 1.5286e+07 50.5266 0.0631823 0.996223 0 50.0642 GTEX-145LS-0011-R4b-SM-5S2UT C1, A1 5.7 Brain Brain - Amygdala 0001876 767 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989456 1.11744e+06 0.93346 0.992361 0.809322 23924 1 76 0.00195656 267 0 8.02086e+07 0.0662919 6.33256e+06 8.0826e+07 7.93385e+06 23941 3.9886e+07 0 0.124139 0.992361 0.803139 8.02086e+07 0.003302 1.7104e+07 4.13759e+07 1.72862e+07 307 1.71506e+07 7.1886e+06 0.00262731 1.74883e+07 50.4874 0.0783481 0.995267 0 50.2649 GTEX-145LS-0011-R5a-SM-5SI65 C1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 767 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.986903 970184 0.944528 0.989777 0.797645 24824 1 76 0.00198143 268 0 8.88501e+07 0.0550963 4.83384e+06 8.97677e+07 8.29958e+06 24844 4.41876e+07 0 0.146883 0.989777 0.789491 8.88501e+07 0.00318074 1.91614e+07 3.47612e+07 1.91338e+07 305 1.90963e+07 9.57296e+06 0.00257934 1.94372e+07 50.4423 0.0538483 0.992652 0 49.964 GTEX-145LS-0011-R6b-SM-5PNWL C1, A1 8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 767 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992818 617811 0.948092 0.994467 0.807 23723 1 76 0.00193826 154 0 6.63414e+07 0.051535 2.97223e+06 6.67105e+07 6.37467e+06 23740 3.3042e+07 0 0.141092 0.994467 0.802535 6.63414e+07 0.00283278 1.43032e+07 1.76722e+07 1.44422e+07 193 1.43998e+07 8.04542e+06 0.00238477 1.44542e+07 50.0944 0.0445541 0.996117 0 50.2417 GTEX-145LS-0011-R7a-SM-5PNWM C1, A1 8.7 Brain Brain - Putamen (basal ganglia) 0001874 767 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992986 678249 0.947463 0.994521 0.80162 23587 1 76 0.00193227 197 0 7.25451e+07 0.0522432 4.06907e+06 7.29448e+07 6.68482e+06 23605 3.61396e+07 0 0.145842 0.994521 0.797228 7.25451e+07 0.00285645 1.55628e+07 2.64784e+07 1.57854e+07 246 1.56847e+07 7.53135e+06 0.00239365 1.57784e+07 50.1488 0.0557829 0.996056 0 50.3549 GTEX-145LS-0011-R8b-SM-5PNXA C1, A1 7.9 Brain Brain - Hypothalamus 0001898 767 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992427 979680 0.945269 0.993029 0.781267 26298 1 76 0.00306646 275 0 1.01507e+08 0.0543399 3.19916e+06 1.0222e+08 2.81167e+06 26344 5.05559e+07 0 0.164002 0.993029 0.775821 1.01507e+08 0.00344939 2.19301e+07 2.73216e+07 2.22363e+07 318 2.20843e+07 1.26167e+07 0.00325781 2.21512e+07 50.0756 0.0312969 0.993631 0 50.3467 GTEX-145LS-0126-SM-5QGP1 0 C1 pieces; 5% dermal fat; well trimmed 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 848 731 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.9933 135268 0.977338 0.994481 0.821435 22027 1 76 0.00182639 170 0 6.9945e+07 0.0224119 239884 7.03331e+07 4.75947e+06 22049 3.48383e+07 0 0.155903 0.994481 0.816902 6.9945e+07 0.00278537 1.52378e+07 6.99590e+06 1.53109e+07 169 1.52434e+07 1.30821e+07 0.00230531 1.53933e+07 50.2446 0.00341068 0.995662 0 50.1197 GTEX-145LS-0226-SM-5O9A5 0 C1 2 pieces; 5% fibrous content 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 851 728 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988637 207647 0.977055 0.992051 0.794837 22933 1 76 0.00217374 159 0 7.42711e+07 0.0225807 358687 7.48662e+07 1.05463e+07 22961 3.69074e+07 0 0.182218 0.992051 0.788519 7.42711e+07 0.00368817 1.62841e+07 8.34169e+06 1.64362e+07 174 1.6453e+07 1.29623e+07 0.00292835 1.65151e+07 50.0943 0.00479104 0.995465 0 50.2324 GTEX-145LS-0426-SM-5LU8M 1 C1 2 pieces; no plaques; microcalcification; well trimmed 6.9 Blood Vessel Artery - Tibial 0007610 854 726 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989866 244140 0.972966 0.991934 0.783323 21786 1 76 0.00453434 138 0 6.91329e+07 0.0267154 291763 6.9695e+07 6.14531e+06 21812 3.43589e+07 0 0.189643 0.991934 0.777004 6.91329e+07 0.00389923 1.49091e+07 5.82751e+06 1.50221e+07 149 1.5012e+07 1.18526e+07 0.00421745 1.50619e+07 50.083 0.00418628 0.994003 0 50.1886 GTEX-145LS-0526-SM-5LU8Y 1 C1 2 pieces; 10% internal fat in 1 piece 7.8 Muscle Muscle - Skeletal 0011907 866 714 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991533 297373 0.979339 0.993532 0.847169 21008 1 76 0.0041999 169 0 7.82804e+07 0.0204009 976482 7.879e+07 7.18063e+06 21023 3.89596e+07 0 0.132171 0.993532 0.841689 7.82804e+07 0.00337905 1.69789e+07 8.71954e+06 1.70619e+07 176 1.70985e+07 1.58545e+07 0.0037903 1.70892e+07 49.9865 0.0123935 0.995531 0 50.1219 GTEX-145LS-0626-SM-7EPG7 0 C1 6 pieces; well trimmed; minimal dermal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 869 712 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.980709 128052 0.976466 0.983165 0.737433 24348 1 76 0.00322019 142 0 8.79363e+07 0.0232869 395221 8.9442e+07 1.16705e+07 24394 4.37668e+07 0 0.239033 0.983165 0.725018 8.79363e+07 0.0118944 1.9365e+07 9.30926e+06 1.95121e+07 149 1.95702e+07 1.34496e+07 0.00754647 1.95171e+07 49.9321 0.00441874 0.985621 0 50.1892 GTEX-145LS-1226-SM-5Q5D9 1 C1 2 pieces; emphysema 8.6 Lung Lung 0008952 885 699 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.971092 157636 0.970788 0.974048 0.780686 23948 1 76 0.00258796 201 0 8.62757e+07 0.0286592 201399 8.85744e+07 1.29952e+07 23993 4.28498e+07 0 0.190102 0.974048 0.760425 8.62757e+07 0.00403815 1.8961e+07 1.11286e+07 1.91889e+07 218 1.9135e+07 1.28968e+07 0.00331085 1.92679e+07 50.1729 0.00227378 0.977004 0 50.2986 GTEX-145LS-1326-SM-5Q5EP 1 C1 2 pieces; 30% fibrofatty content on 1 piece 7.6 Heart Heart - Atrial Appendage 0006631 887 697 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989434 220917 0.979788 0.992747 0.83507 22286 1 76 0.00199833 269 0 8.91902e+07 0.0199723 2.27251e+06 8.98418e+07 1.40869e+07 22304 4.43533e+07 0 0.144718 0.992747 0.829013 8.91902e+07 0.00345308 1.88606e+07 1.17002e+07 1.90336e+07 280 1.90686e+07 1.51856e+07 0.00272327 1.90785e+07 50.0131 0.0252946 0.99606 0 50.2283 GTEX-145LS-1826-SM-5LUAZ 2 C1 4 pieces; moderate sloughing of squamous epithelium 6.4 Esophagus Esophagus - Mucosa 0006920 896 691 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989814 280457 0.970337 0.991981 0.760497 23396 1 76 0.00458327 127 0 6.58733e+07 0.0294555 417358 6.64058e+07 5.71980e+06 23416 3.27437e+07 0 0.20984 0.991981 0.754399 6.58733e+07 0.0038076 1.46806e+07 7.48286e+06 1.47444e+07 146 1.47508e+07 9.13261e+06 0.00419628 1.48172e+07 50.1123 0.00628496 0.994148 0 50.1083 GTEX-145LS-2026-SM-5Q5D7 2 C1 4 pieces 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 899 692 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.964772 150625 0.970902 0.967521 0.766168 23906 1 76 0.00224513 163 0 7.90041e+07 0.0288374 754700 8.16562e+07 1.14044e+07 23941 3.9257e+07 0 0.204735 0.967521 0.741283 7.90041e+07 0.00375131 1.72763e+07 7.26779e+06 1.74016e+07 191 1.7357e+07 1.14509e+07 0.00299608 1.75336e+07 50.253 0.00924241 0.970271 0 50.1806 GTEX-145LS-2326-SM-5TDCY 1 C1 2 pieces; atrophic; corpora albicantia 6.8 Ovary Ovary 0000992 905 687 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.985054 223254 0.955203 0.989216 0.745982 22437 1 76 0.00236059 127 0 5.33551e+07 0.0445921 164799 5.39368e+07 7.15242e+06 22460 2.64744e+07 0 0.209221 0.989216 0.737937 5.33551e+07 0.00440975 1.14251e+07 9.70022e+06 1.15378e+07 124 1.15433e+07 9.10984e+06 0.00338086 1.1646e+07 50.2216 0.00305541 0.993377 0 50.2454 GTEX-145LS-2426-SM-5TDCZ 1 C1 2 pieces; only myometrium on this cut 6.9 Uterus Uterus 0000995 908 684 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986407 176983 0.962382 0.989523 0.743381 23599 1 76 0.00241279 128 0 6.15168e+07 0.0373877 196326 6.21681e+07 7.32777e+06 23631 3.05385e+07 0 0.219001 0.989523 0.735593 6.15168e+07 0.00442937 1.32629e+07 6.90235e+06 1.34392e+07 141 1.33994e+07 9.26401e+06 0.0034179 1.34952e+07 50.1781 0.00315798 0.992639 0 50.3302 GTEX-145LS-2426-SM-EZ6XT 1 C1 2 pieces; only myometrium on this cut Uterus Uterus 0000995 908 684 BP-49480 DNA Extraction from Paxgene-derived Lysate Plate Based 02/13/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-145LS-2526-SM-5TDC9 1 C1 6 pieces; epithelium largely detached or sloughed 6.6 Vagina Vagina 0000996 909 684 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986151 382423 0.958528 0.989727 0.741358 24937 1 76 0.00245509 148 0 7.25912e+07 0.0411917 560183 7.33446e+07 8.78698e+06 24965 3.60207e+07 0 0.217169 0.989727 0.733743 7.25912e+07 0.00465691 1.56785e+07 1.49704e+07 1.58639e+07 159 1.58439e+07 1.10417e+07 0.00355202 1.59594e+07 50.1816 0.00763768 0.993304 0 50.2938 GTEX-145LS-2726-SM-5Q5D8 3 C1 6 pieces; epithelium autolyzed; muscle intact 6.6 Colon Colon - Transverse 0001157 911 683 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.978461 241094 0.973168 0.980973 0.833093 24292 1 76 0.00210609 281 0 1.04661e+08 0.026527 720928 1.06691e+08 1.45111e+07 24318 5.20311e+07 0 0.140074 0.980973 0.817242 1.04661e+08 0.00358216 2.26323e+07 9.83391e+06 2.27623e+07 323 2.27333e+07 1.88261e+07 0.00284223 2.29142e+07 50.1981 0.00675718 0.983485 0 50.1432 GTEX-145LS-2926-SM-5O99G 1 C1 6 pieces; well dissected muscularis 6.3 Colon Colon - Sigmoid 0001159 916 679 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986929 241623 0.970004 0.990453 0.783701 24117 1 76 0.00225297 172 0 8.04861e+07 0.0297281 892170 8.12619e+07 1.03771e+07 24147 3.99534e+07 0 0.186304 0.990453 0.776218 8.04861e+07 0.00398471 1.74478e+07 8.39186e+06 1.76516e+07 199 1.76153e+07 1.23611e+07 0.00311576 1.77643e+07 50.2105 0.0109789 0.993976 0 50.2904 GTEX-145LS-3026-SM-5O99S 1 C1 4 pieces 7.9 Brain Brain - Cerebellum 0002037 922 673 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987683 487072 0.931847 0.991055 0.680413 23749 1 76 0.00245761 111 0 6.60351e+07 0.0677476 894335 6.66311e+07 9.07802e+06 23780 3.2808e+07 0 0.251434 0.991055 0.674326 6.60351e+07 0.00389279 1.39562e+07 2.047e+07 1.41902e+07 138 1.42479e+07 7.80622e+06 0.00317276 1.41137e+07 49.7634 0.0134222 0.994426 0 50.4157 GTEX-145LS-3126-SM-5Q5BY 1 C1 4 pieces; meningeal vessels on 1 piece 6.8 Brain Brain - Cortex 0001870 925 671 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98733 414141 0.959895 0.990952 0.82212 24252 1 76 0.00184552 268 0 7.77706e+07 0.0397485 3.2359e+06 7.84808e+07 6.44899e+06 24267 3.86461e+07 0 0.137775 0.990952 0.814682 7.77706e+07 0.00297569 1.68934e+07 1.5987e+07 1.71848e+07 263 1.71592e+07 9.3208e+06 0.00240854 1.71794e+07 50.0294 0.0412317 0.994573 0 50.4275 GTEX-145LS-3226-SM-5TDCA 1 C1 1 piece; 50% fibrous stroma between anterior and posterior components [annotated] 7 Pituitary Pituitary 0000007 926 670 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989562 388842 0.956709 0.992377 0.770684 25097 1 76 0.00227416 160 0 7.96579e+07 0.043022 294848 8.02698e+07 9.45492e+06 25130 3.9608e+07 0 0.186025 0.992377 0.764809 7.96579e+07 0.00404807 1.69667e+07 1.81978e+07 1.71335e+07 173 1.71576e+07 1.34352e+07 0.0031586 1.71618e+07 50.006 0.00367321 0.995192 0 50.2446 GTEX-145LT-0126-SM-5S2QJ 1 B1 2 pieces, all cortex, good specimens 9.3 Adrenal Gland Adrenal Gland 0002369 109 759 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99415 139245 0.978408 0.995269 0.840837 20317 1 76 0.0017884 116 0 5.31676e+07 0.0212412 806059 5.34204e+07 3.10602e+06 20326 2.64925e+07 0 0.137571 0.995269 0.836859 5.31676e+07 0.00244526 1.17537e+07 6.85568e+06 1.19479e+07 137 1.19046e+07 8.87482e+06 0.00211646 1.18492e+07 49.8834 0.015089 0.996387 0 50.4097 GTEX-145LT-0126-SM-E9WQX 1 B1 2 pieces, all cortex, good specimens Adrenal Gland Adrenal Gland 0002369 109 759 BP-49549 DNA Extraction from Paxgene-derived Lysate Plate Based 02/18/2014 LCSET-10779 04/15/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-145LT-0226-SM-5S2QK 1 B1 2 pieces, no abnormalities 6 Thyroid Thyroid 0002046 115 753 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.99132 160822 0.966662 0.992636 0.744661 23222 1 76 0.00180488 163 0 7.84759e+07 0.0331319 456280 7.90581e+07 3.88312e+06 23258 3.90693e+07 0 0.222001 0.992636 0.739178 7.84759e+07 0.00263808 1.71582e+07 8.14294e+06 1.73972e+07 199 1.72815e+07 9.75157e+06 0.00222093 1.73676e+07 50.1243 0.00577145 0.993951 0 50.3458 GTEX-145LT-0226-SM-EZ6Y2 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 115 753 BP-49549 DNA Extraction from Paxgene-derived Lysate Plate Based 02/18/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-145LT-0326-SM-5LUAD 1 B1 2 pieces, mild congestion, atalectasis 8 Lung Lung 0008952 122 746 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991834 190069 0.979793 0.99371 0.835467 21772 1 76 0.00449881 119 0 5.86686e+07 0.0198425 330261 5.904e+07 4.99551e+06 21784 2.91932e+07 0 0.144326 0.99371 0.830212 5.86686e+07 0.00360668 1.30295e+07 5.01308e+06 1.31487e+07 125 1.31507e+07 1.18708e+07 0.00405359 1.31356e+07 49.9712 0.00559385 0.995585 0 50.2277 GTEX-145LT-0426-SM-5LUAP 1 B1 2 pieces, ~50% viable seminiferous tubules; rest either infarcted/epididymis 7 Testis Testis 0000473 135 733 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990291 266806 0.942408 0.992252 0.739055 31226 1 76 0.00449528 121 0 6.11991e+07 0.0572755 561769 6.1677e+07 5.43832e+06 31272 3.04436e+07 0 0.203353 0.992252 0.733329 6.11991e+07 0.00362375 1.30396e+07 7.15798e+06 1.31014e+07 118 1.31396e+07 1.03337e+07 0.00406038 1.31151e+07 49.9533 0.00910824 0.994213 0 50.1183 GTEX-145LT-0526-SM-5LUB2 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 139 729 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989024 272961 0.970798 0.991113 0.791611 23620 1 76 0.00453359 140 0 6.37716e+07 0.0290368 711368 6.43434e+07 5.58418e+06 23645 3.17178e+07 0 0.179187 0.991113 0.784576 6.37716e+07 0.00386624 1.4039e+07 7.47202e+06 1.41584e+07 146 1.41056e+07 9.70213e+06 0.00420062 1.42234e+07 50.2079 0.0110558 0.993202 0 50.2117 GTEX-145LT-0626-SM-5O99E 1 B1 2 pieces, focal PIN, not obvious tumor 6.1 Prostate Prostate 0002367 154 714 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.979018 454778 0.958696 0.983401 0.782948 24321 1 76 0.00236333 206 0 8.23872e+07 0.0411052 940167 8.37778e+07 1.14453e+07 24349 4.09029e+07 0 0.175748 0.983401 0.769952 8.23872e+07 0.00410372 1.79578e+07 2.11885e+07 1.80891e+07 234 1.80815e+07 8.8846e+06 0.00322965 1.83043e+07 50.3061 0.0112221 0.987784 0 50.1821 GTEX-145LT-0726-SM-5S2VM 1 B1 2 pieces, gynecomastoid stromal hyperplasia; rep ductal elements delineated 7.9 Breast Breast - Mammary Tissue 0008367 160 708 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989471 162916 0.977913 0.992375 0.849379 23149 1 76 0.00181745 165 0 7.0587e+07 0.0217987 252043 7.11293e+07 6.88293e+06 23166 3.51074e+07 0 0.128534 0.992375 0.842903 7.0587e+07 0.00310664 1.55238e+07 7.13006e+06 1.56416e+07 168 1.56182e+07 1.54769e+07 0.00246016 1.57522e+07 50.2136 0.00354345 0.99528 0 50.1891 GTEX-145LT-0826-SM-5S2QL 1 B1 6 pieces, target muscularis; trace (<1mm) 'contaminant' mucosa present; delineated 7.5 Colon Colon - Sigmoid 0001159 172 696 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.992627 227036 0.972708 0.993877 0.842005 21523 1 76 0.00165753 176 0 7.46677e+07 0.0270238 559492 7.51277e+07 4.10626e+06 21543 3.71625e+07 0 0.130703 0.993877 0.83685 7.46677e+07 0.00239769 1.60338e+07 7.40188e+06 1.62082e+07 198 1.6093e+07 1.29184e+07 0.00202714 1.62428e+07 50.2317 0.00744721 0.995128 0 50.2704 GTEX-145LT-0926-SM-5LU9C 1 B1 6 pieces, remarkably well preserved, mucosa ~0.3mm, 10% thickness, valuable specimen 7.3 Colon Colon - Transverse 0001157 175 693 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989444 309441 0.97408 0.991923 0.817269 22746 1 76 0.00476251 134 0 6.33399e+07 0.0250234 954321 6.38556e+07 5.42681e+06 22763 3.14506e+07 0 0.156811 0.991923 0.810668 6.33399e+07 0.00413173 1.41002e+07 8.49363e+06 1.4167e+07 150 1.41138e+07 9.37292e+06 0.00444791 1.43078e+07 50.3413 0.014945 0.994402 0 50.1182 GTEX-145LT-1026-SM-5LU9O 1 B1 6 pieces, lymphoid aggregates (rep delineated)are ~30% of specimen, well preserved 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 186 682 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991276 203093 0.974716 0.992919 0.80445 23579 1 76 0.00465085 152 0 7.32952e+07 0.0248083 462233 7.38179e+07 6.56972e+06 23603 3.6475e+07 0 0.170265 0.992919 0.798754 7.32952e+07 0.0037852 1.63175e+07 8.80544e+06 1.64481e+07 160 1.64034e+07 1.26243e+07 0.00421874 1.64791e+07 50.1151 0.0062618 0.994562 0 50.1992 GTEX-145LT-1126-SM-5LUA1 1 B1 6 pieces, Squamous mucosa is ~0.6mm, ~15-20% thickness; submucosal lymphoid aggregates are prominent, rep delineated 8.9 Esophagus Esophagus - Mucosa 0006920 196 672 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.98992 340167 0.976195 0.992148 0.832875 21975 1 76 0.00449737 136 0 6.24078e+07 0.0232841 465580 6.29017e+07 5.63111e+06 21991 3.1022e+07 0 0.14332 0.992148 0.826335 6.24078e+07 0.00391085 1.39974e+07 7.95451e+06 1.40924e+07 138 1.40844e+07 1.19951e+07 0.00420477 1.41441e+07 50.1058 0.00740171 0.994377 0 50.1691 GTEX-145LT-1226-SM-5Q5BZ 1 B1 6 pieces, target muscularis, good specimens 8.1 Esophagus Esophagus - Muscularis 0004648 202 666 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991976 157774 0.977933 0.993938 0.864138 20677 1 76 0.00170663 156 0 6.59802e+07 0.021813 481181 6.63826e+07 4.26873e+06 20690 3.28441e+07 0 0.113794 0.993938 0.8589 6.59802e+07 0.00268975 1.42467e+07 5.65166e+06 1.4328e+07 171 1.4236e+07 1.18849e+07 0.00219722 1.44603e+07 50.3908 0.0072486 0.995901 0 50.1423 GTEX-145LT-1326-SM-5O9AQ 1 B1 6 pieces, target muscularis, good specimens 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 207 661 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909,LCSET-5337 04/10/2014 TruSeq.v1 RNASEQ 0.99161 198397 0.9758 0.993943 0.834862 22107 1 76 0.00193188 172 0 7.43195e+07 0.0239445 585462 7.47725e+07 7.13298e+06 22122 3.69937e+07 0 0.140938 0.993943 0.829805 7.43195e+07 0.00294396 1.62193e+07 7.15296e+06 1.62907e+07 195 1.62513e+07 1.25631e+07 0.00243673 1.64213e+07 50.2601 0.00782991 0.996275 0 50.1098 GTEX-145LT-1426-SM-5O9B3 1 B1 6 pieces, mucosa well - preserved, up to ~0.9mm, ~3040% thickness 6.9 Stomach Stomach 0000945 212 656 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.979742 145388 0.984103 0.984034 0.857363 21166 1 76 0.00217368 329 0 7.33274e+07 0.0155295 1.04479e+06 7.45171e+07 1.04844e+07 21178 3.64304e+07 0 0.126739 0.984034 0.843674 7.33274e+07 0.00368681 1.67872e+07 9.07147e+07 1.70287e+07 237 1.70686e+07 1.84964e+07 0.00292694 1.70568e+07 49.9826 0.0140208 0.988325 0 50.3571 GTEX-145LT-1526-SM-5O98P 1 B1 2 pieces, minimal fascia 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 216 652 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.98688 337991 0.979019 0.990749 0.842673 22424 1 76 0.00223728 372 0 1.00016e+08 0.0207497 1.22544e+06 1.0095e+08 1.43364e+07 22441 4.97028e+07 0 0.136346 0.990749 0.834877 1.00016e+08 0.00376366 2.19027e+07 1.62229e+07 2.21457e+07 352 2.20072e+07 1.41106e+07 0.00299749 2.23862e+07 50.4269 0.0121391 0.994617 0 50.2758 GTEX-145LT-1626-SM-5O992 0 B1 2 pieces, minimal interstitial fat 8.7 Muscle Muscle - Skeletal 0011907 430 438 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987041 376663 0.982972 0.991164 0.874004 20213 1 76 0.00208334 378 0 1.16438e+08 0.016802 1.54798e+06 1.17476e+08 1.72263e+07 20223 5.78653e+07 0 0.108968 0.991164 0.866281 1.16438e+08 0.00351503 2.53581e+07 2.07454e+07 2.53558e+07 342 2.53924e+07 2.26778e+07 0.0027962 2.57512e+07 50.3508 0.013177 0.995286 0 49.9978 GTEX-145LT-1726-SM-5QGP3 0 B1 6 pieces, no dermal fat, squamous epithelium is ~50-60 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 441 427 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993671 144165 0.979231 0.994807 0.852626 23278 1 76 0.00181683 224 0 8.42546e+07 0.0205375 759902 8.46945e+07 5.56266e+06 23292 4.19749e+07 0 0.126605 0.994807 0.848198 8.42546e+07 0.00278159 1.85626e+07 8.5899e+06 1.86461e+07 240 1.85419e+07 1.5938e+07 0.00229866 1.87676e+07 50.3025 0.00897227 0.995942 0 50.1122 GTEX-145LT-1826-SM-5QGP4 0 B1 2 pieces, ~5% fascia/vascular tissue, rep delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 432 436 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993733 174486 0.977002 0.995001 0.835936 20977 1 76 0.00187123 135 0 5.89868e+07 0.0227176 476027 5.92831e+07 3.68198e+06 20986 2.9383e+07 0 0.141067 0.995001 0.831757 5.89868e+07 0.0028863 1.30272e+07 6.90593e+06 1.31293e+07 151 1.30599e+07 1.02007e+07 0.00237812 1.31753e+07 50.2198 0.00802972 0.99627 0 50.1952 GTEX-145LT-1926-SM-5QGP5 0 B1 2 pieces, nubbin of adherent fat, ~2mm, delineated 5.8 Nerve Nerve - Tibial 0001323 443 425 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992495 194717 0.969027 0.993825 0.774631 22536 1 76 0.00189949 147 0 6.31956e+07 0.0307361 253655 6.35883e+07 4.44147e+06 22557 3.14554e+07 0 0.194396 0.993825 0.769848 6.31956e+07 0.00294247 1.38062e+07 7.11e+06 1.39479e+07 154 1.38699e+07 9.94817e+06 0.00242028 1.39734e+07 50.1859 0.00398902 0.995154 0 50.2553 GTEX-145LT-5001-SM-AN41S B1 Lung Lung 0008952 130 ChIP-Seq GTEX-145LT-5013-SM-AN41U B1 Muscle Muscle - Skeletal 0011907 428 ChIP-Seq GTEX-145LU-0004-SM-DINCL C1 Blood Whole Blood 0013756 783 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-145LU-0004-SM-DLIOV C1 Blood Whole Blood 0013756 783 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-145LU-0011-R10a-SM-5PNWJ C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 854 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99403 504117 0.959097 0.995312 0.839313 22536 1 76 0.00213771 269 0 7.84346e+07 0.0405838 4.17272e+06 7.88041e+07 6.78966e+06 22547 3.90987e+07 0 0.119784 0.995312 0.835378 7.84346e+07 0.00296948 1.68687e+07 2.69813e+07 1.71794e+07 276 1.69592e+07 7.74487e+06 0.00255306 1.71853e+07 50.331 0.0529505 0.996593 0 50.4563 GTEX-145LU-0011-R11b-SM-5P9JX C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 854 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99109 696264 0.940274 0.991568 0.735425 24188 1 76 0.00349084 269 0 1.07545e+08 0.0591789 1.44574e+06 1.0846e+08 3.6241e+06 24223 5.35386e+07 0 0.204849 0.991568 0.729224 1.07545e+08 0.00373904 2.31139e+07 2.38306e+07 2.32173e+07 281 2.31439e+07 1.33265e+07 0.00361488 2.3241e+07 50.1047 0.0133297 0.992046 0 50.1116 GTEX-145LU-0011-R1a-SM-5Q5CE C1, A1 5.8 Brain Brain - Hippocampus 0001954 854 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98255 601280 0.960315 0.986495 0.858006 20655 1 76 0.00231794 371 0 7.37479e+07 0.0395424 7.96216e+06 7.47575e+07 5.61237e+06 20661 3.66255e+07 0 0.102309 0.986495 0.846419 7.37479e+07 0.00353981 1.6095e+07 2.62759e+07 1.63695e+07 336 1.59937e+07 4.48944e+06 0.00292643 1.67281e+07 51.1222 0.106507 0.99044 0 50.4227 GTEX-145LU-0011-R3a-SM-5P9K2 C1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 854 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991955 706082 0.962108 0.992646 0.827105 23613 1 76 0.00349798 267 0 1.05652e+08 0.037593 6.94154e+06 1.06435e+08 3.52318e+06 23626 5.26422e+07 0 0.135004 0.992646 0.821022 1.05652e+08 0.00380888 2.28969e+07 3.56608e+07 2.31376e+07 322 2.29191e+07 9.44942e+06 0.00365332 2.31872e+07 50.2908 0.0652185 0.993338 0 50.2615 GTEX-145LU-0011-R6a-SM-5S2V6 C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 854 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990639 534950 0.95389 0.993376 0.832241 21548 1 76 0.00243712 154 0 5.90886e+07 0.0459796 4.54911e+06 5.94826e+07 5.9371e+06 21561 2.939e+07 0 0.12165 0.993376 0.826728 5.90886e+07 0.00369729 1.28458e+07 2.17409e+07 1.28809e+07 195 1.26395e+07 3.89818e+06 0.00306547 1.32482e+07 51.1756 0.076478 0.996113 0 50.0682 GTEX-145LU-0011-R8b-SM-5PNZG C1, A1 6.5 Brain Brain - Hypothalamus 0001898 854 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992468 697411 0.960164 0.993192 0.841168 24468 1 76 0.00325015 379 0 1.1847e+08 0.0395655 6.81153e+06 1.19282e+08 3.31529e+06 24491 5.90324e+07 0 0.118995 0.993192 0.835442 1.1847e+08 0.00361595 2.5759e+07 2.96723e+07 2.63582e+07 337 2.59609e+07 1.22682e+07 0.00343292 2.62262e+07 50.2542 0.0571043 0.993917 0 50.5749 GTEX-145LU-0011-R9b-SM-5SI66 C1, A1 7.8 Brain Brain - Spinal cord (cervical c-1) 0006469 854 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.987091 672603 0.952938 0.991682 0.805528 23382 1 76 0.00199954 230 0 8.37163e+07 0.0467007 1.79465e+06 8.44185e+07 8.5457e+06 23404 4.15614e+07 0 0.14741 0.991682 0.798828 8.37163e+07 0.00338706 1.83537e+07 1.48826e+07 1.86988e+07 243 1.85661e+07 1.17368e+07 0.00269009 1.88604e+07 50.3932 0.021259 0.996273 0 50.4657 GTEX-145LU-0126-SM-5TDCB 0 C1 6 pieces; 10% dermal fat 10 Skin Skin - Sun Exposed (Lower leg) 0004264 951 720 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988711 272293 0.972088 0.991878 0.780106 24451 1 76 0.00239487 177 0 7.01076e+07 0.0276222 252555 7.06817e+07 8.08399e+06 24480 3.48269e+07 0 0.191982 0.991878 0.77377 7.01076e+07 0.00439614 1.52546e+07 8.53837e+06 1.52937e+07 158 1.53130e+07 1.19572e+07 0.00339231 1.54526e+07 50.2269 0.00357313 0.995045 0 50.0641 GTEX-145LU-0426-SM-5O9AH 2 C1 2 eces; 0.5mm fibrous capsule on 1 edge 6.9 Thyroid Thyroid 0002046 1019 663 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.985797 332077 0.964273 0.990241 0.72342 25315 1 76 0.00235534 162 0 8.38995e+07 0.0353967 228124 8.47264e+07 1.1454e+07 25358 4.16425e+07 0 0.240853 0.990241 0.71636 8.38995e+07 0.0038747 1.81204e+07 1.0896e+07 1.83472e+07 181 1.84289e+07 1.22533e+07 0.00311161 1.83973e+07 49.9571 0.00269248 0.994684 0 50.311 GTEX-145LU-0526-SM-5O9AT 2 C1 2 pieces; emphysema; pulmonary edema 7 Lung Lung 0008952 1021 661 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986441 218376 0.968213 0.990216 0.706091 23450 1 76 0.00261846 124 0 6.11434e+07 0.0310811 87071 6.17476e+07 7.92367e+06 23486 3.03394e+07 0 0.262121 0.990216 0.699183 6.11434e+07 0.00413511 1.33416e+07 7.49765e+06 1.34921e+07 131 1.35426e+07 8.78120e+06 0.0033739 1.35168e+07 49.9523 0.00141011 0.993991 0 50.2805 GTEX-145LU-0726-SM-5QGP2 1 C1 2 pieces; 1 has 50% internal fat, other 10% internal and external fat 7.2 Nerve Nerve - Tibial 0001323 1025 658 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994184 135639 0.967747 0.995177 0.779054 23767 1 76 0.00192046 171 0 7.21019e+07 0.0319231 249636 7.24513e+07 4.74976e+06 23799 3.59184e+07 0 0.188693 0.995177 0.775297 7.21019e+07 0.00278086 1.58341e+07 6.04796e+06 1.59442e+07 173 1.58803e+07 1.15773e+07 0.00235023 1.59709e+07 50.1421 0.00344557 0.996171 0 50.1732 GTEX-145LU-0826-SM-79OJJ 1 C1 2 pieces; focal medial and intimal calcifications 8.2 Blood Vessel Artery - Tibial 0007610 1025 659 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977418 156186 0.973505 0.98121 0.816375 21079 1 76 0.00508368 118 0 5.47821e+07 0.0261 183138 5.58312e+07 1.3084e+07 21095 2.72533e+07 0 0.157131 0.98121 0.801035 5.47821e+07 0.00637209 1.16704e+07 4.66451e+06 1.17515e+07 115 1.18093e+07 1.03055e+07 0.0057254 1.18039e+07 49.9886 0.00328021 0.985002 0 50.1731 GTEX-145LU-0926-SM-79OJL 1 C1 6 pieces; 2 mm focus of glycogenic acanthosis in 3 sections [annotated] 6.2 Esophagus Esophagus - Mucosa 0006920 1027 657 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.978128 194923 0.974936 0.981804 0.813407 21595 1 76 0.00487148 126 0 6.55707e+07 0.0247075 850315 6.6786e+07 1.44233e+07 21608 3.26144e+07 0 0.161529 0.981804 0.798606 6.55707e+07 0.00620294 1.46151e+07 9.15469e+06 1.47157e+07 152 1.47916e+07 9.75302e+06 0.00553472 1.47698e+07 49.9631 0.0127319 0.985479 0 50.1714 GTEX-145LU-1226-SM-5LU9B 0 C1 2 pieces; pure adipose 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1031 655 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990048 240807 0.972349 0.991984 0.788955 23913 1 76 0.004685 143 0 7.45511e+07 0.0272778 250722 7.51536e+07 6.44577e+06 23936 3.70583e+07 0 0.183394 0.991984 0.782631 7.45511e+07 0.00382495 1.63325e+07 9.47642e+06 1.64303e+07 163 1.64333e+07 1.19533e+07 0.00425582 1.64755e+07 50.0642 0.00333613 0.99392 0 50.1493 GTEX-145LU-1326-SM-5LU9N 1 C1 2 pieces; 10% macrovesicular steatosis 5.8 Liver Liver 0001114 1033 653 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988492 382022 0.961899 0.990837 0.788708 20963 1 76 0.00501957 128 0 6.50893e+07 0.0379653 1.28084e+06 6.56912e+07 5.77401e+06 20977 3.23463e+07 0 0.17319 0.990837 0.781481 6.50893e+07 0.0044078 1.40681e+07 1.90855e+07 1.42992e+07 164 1.42644e+07 6.13093e+06 0.00471441 1.42511e+07 49.9766 0.0194978 0.993181 0 50.4072 GTEX-145LU-1926-SM-79OJN 1 C1 6 pieces; well trimmed; 5% dermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1047 642 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.97959 202042 0.972852 0.983335 0.775459 23356 1 76 0.00487283 154 0 6.611e+07 0.026847 248889 6.72304e+07 1.42741e+07 23388 3.28777e+07 0 0.197392 0.983335 0.762536 6.611e+07 0.00623942 1.44537e+07 8.48229e+06 1.44774e+07 142 1.45665e+07 1.0742e+07 0.00555353 1.45991e+07 50.0558 0.00370203 0.98708 0 50.0411 GTEX-145LU-2026-SM-5Q5E8 0 C1 2 pieces; fat free 8.3 Muscle Muscle - Skeletal 0011907 1056 634 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990729 233589 0.982943 0.99391 0.868774 20165 1 76 0.00203501 202 0 8.53442e+07 0.0168151 593101 8.58671e+07 1.15741e+07 20178 4.24569e+07 0 0.114169 0.99391 0.863484 8.53442e+07 0.00358263 1.86912e+07 8.89934e+06 1.86626e+07 220 1.87185e+07 1.86618e+07 0.00280634 1.88885e+07 50.2261 0.0069072 0.997092 0 49.9617 GTEX-145LU-2126-SM-5Q5E9 1 C1 2 pieces; smooth muscle & fibrous tissue; no glands 6 Prostate Prostate 0002367 1069 621 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.98938 193344 0.970235 0.992114 0.785394 24111 1 76 0.00233088 270 0 8.61137e+07 0.0295343 1.60424e+06 8.67982e+07 1.18569e+07 24136 4.28084e+07 0 0.184841 0.992114 0.7792 8.61137e+07 0.00381521 1.88432e+07 9.98849e+06 1.8976e+07 264 1.89173e+07 1.0645e+07 0.003071 1.91273e+07 50.276 0.0184824 0.994847 0 50.1756 GTEX-145LU-2626-SM-5LU9Z 1 C1 4 pieces 6.2 Brain Brain - Cerebellum 0002037 1103 590 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990397 425728 0.935043 0.992138 0.701883 23356 1 76 0.0047972 112 0 6.32979e+07 0.0646585 951412 6.37995e+07 5.27689e+06 23380 3.14633e+07 0 0.23316 0.992138 0.696364 6.32979e+07 0.00397778 1.3484e+07 1.6698e+07 1.35759e+07 136 1.35715e+07 6.52091e+06 0.00438821 1.35975e+07 50.048 0.0149125 0.993878 0 50.1699 GTEX-145LU-2826-SM-5TDD1 1 C1 1 piece; mostly anterior; posterior marked 7.1 Pituitary Pituitary 0000007 1107 587 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987658 433169 0.957867 0.991197 0.752054 24998 1 76 0.00243733 144 0 7.3445e+07 0.0418904 395621 7.40973e+07 9.54691e+06 25032 3.64708e+07 0 0.205813 0.991197 0.745434 7.3445e+07 0.00462899 1.54825e+07 1.33026e+07 1.56448e+07 168 1.56678e+07 1.05914e+07 0.00352925 1.57136e+07 50.0729 0.00533921 0.994736 0 50.2608 GTEX-145LV-0226-SM-5S2QG 1 B1 2 pieces; foci of hypereosinophilia (ischemic) [annotated] 7.2 Heart Heart - Atrial Appendage 0006631 404 775 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992932 198858 0.975972 0.993834 0.834028 20534 1 76 0.00189379 123 0 5.77202e+07 0.023851 855557 5.80783e+07 3.35307e+06 20544 2.87701e+07 0 0.141944 0.993834 0.828885 5.77202e+07 0.00254498 1.23033e+07 1.20217e+07 1.25523e+07 154 1.23797e+07 7.76109e+06 0.00221908 1.25141e+07 50.2698 0.0147311 0.994737 0 50.5008 GTEX-145LV-0326-SM-5Q5BW 1 B1 2 pieces; foci of hypereosinophilia (ischemic) and fibrosis [annotated] 6 Heart Heart - Left Ventricle 0006566 409 770 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989164 140890 0.982961 0.992325 0.853126 19184 1 76 0.00210165 147 0 6.61672e+07 0.0169136 1.85347e+06 6.6679e+07 4.89254e+06 19189 3.29031e+07 0 0.129835 0.992325 0.846578 6.61672e+07 0.00321755 1.46102e+07 1.94224e+07 1.43754e+07 200 1.42291e+07 7.54488e+06 0.00265782 1.492e+07 51.1852 0.027797 0.995485 0 49.5949 GTEX-145LV-0926-SM-EZ6Y3 1 B1 2 pieces; 20 & 5% external fat content Adrenal Gland Adrenal Gland 0002369 423 756 BP-49518 DNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-145LV-1026-SM-5O9AE 0 B1 2 pieces; more submesothelial fibrosis than usual. No vasculitis. 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 422 757 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.984211 281419 0.975746 0.99013 0.833852 21381 1 76 0.00215084 133 0 5.63243e+07 0.024045 662594 5.68858e+07 7.85726e+06 21391 2.79133e+07 0 0.141894 0.99013 0.825622 5.63243e+07 0.00412119 1.23926e+07 7.20862e+06 1.24078e+07 148 1.24202e+07 9.21546e+06 0.00313013 1.26962e+07 50.5495 0.0116478 0.996049 0 50.0306 GTEX-145LV-1126-SM-5Q5C1 1 B1 2 pieces; 10% fibrofatty portion on 1 edge 8.4 Thyroid Thyroid 0002046 424 755 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.989582 195351 0.97576 0.992572 0.841441 20000 1 76 0.00179178 141 0 6.32532e+07 0.0240611 885662 6.37266e+07 5.00185e+06 20011 3.14659e+07 0 0.134319 0.992572 0.835191 6.32532e+07 0.0029399 1.37026e+07 1.0337e+07 1.38193e+07 161 1.37524e+07 1.07227e+07 0.00236411 1.39312e+07 50.3228 0.0138978 0.995561 0 50.212 GTEX-145LV-1226-SM-5S2QH 1 B1 2 pieces 6.3 Prostate Prostate 0002367 426 753 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990056 184800 0.955919 0.991097 0.69335 24229 1 76 0.00195848 132 0 6.23413e+07 0.0439049 383336 6.29013e+07 3.44159e+06 24265 3.10234e+07 0 0.262569 0.991097 0.687177 6.23413e+07 0.00289183 1.35469e+07 8.2929e+06 1.37373e+07 143 1.36582e+07 7.8277e+06 0.00242467 1.3694e+07 50.0655 0.00609425 0.992137 0 50.3488 GTEX-145LV-1326-SM-5S2QI 1 B1 6 pieces; 7.9 Esophagus Esophagus - Mucosa 0006920 440 739 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99321 132527 0.969349 0.994195 0.791326 21350 1 76 0.00182172 130 0 5.82643e+07 0.0304375 443648 5.86045e+07 3.3367e+06 21369 2.90231e+07 0 0.178023 0.994195 0.786732 5.82643e+07 0.00260365 1.29007e+07 7.59369e+06 1.31208e+07 144 1.30244e+07 9.43148e+06 0.0022123 1.30498e+07 50.0487 0.0075702 0.995181 0 50.423 GTEX-145LV-1426-SM-5Q5BV 1 B1 4 pieces; no sign of fibrosis 6.5 Esophagus Esophagus - Muscularis 0004648 441 738 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986731 184114 0.971677 0.990105 0.829974 22133 1 76 0.00185811 198 0 7.54612e+07 0.0280983 750672 7.62153e+07 5.53937e+06 22151 3.74818e+07 0 0.141702 0.990105 0.821762 7.54612e+07 0.00302837 1.63401e+07 7.33511e+06 1.64476e+07 204 1.63791e+07 1.18108e+07 0.00244125 1.66481e+07 50.4072 0.00984936 0.993478 0 50.1639 GTEX-145LV-2126-SM-5LU8N 1 B1 6 pieces; 10% dermal fat; no sign of sclerosis or vasculitis 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 476 703 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990856 253524 0.969794 0.99271 0.795398 23678 1 76 0.00451951 178 0 7.71736e+07 0.0299923 389247 7.77403e+07 6.36294e+06 23702 3.83855e+07 0 0.174397 0.99271 0.789599 7.71736e+07 0.00379212 1.68379e+07 7.98141e+06 1.69608e+07 177 1.68953e+07 1.2253e+07 0.0041565 1.70452e+07 50.2209 0.00500702 0.994564 0 50.1818 GTEX-145LV-2326-SM-5LU8Z 0 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 491 688 BP-47591 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.992104 230591 0.977082 0.994001 0.855204 20246 1 76 0.00429947 151 0 6.81579e+07 0.022732 736161 6.85692e+07 5.57772e+06 20251 3.39263e+07 0 0.121877 0.994001 0.850074 6.81579e+07 0.00355935 1.47994e+07 8.18849e+06 1.496e+07 156 1.49185e+07 1.28951e+07 0.00393012 1.4958e+07 50.0662 0.010736 0.995897 0 50.2698 GTEX-145LV-2426-SM-E9WQW 1 B1 2 pieces; several arteries, some with some without plaques Blood Vessel Artery - Tibial 0007610 492 687 BP-49659 DNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-10779 04/15/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-145LV-2526-SM-5S2VA 1 B1 2 pieces; 70% external fat 7.3 Nerve Nerve - Tibial 0001323 492 687 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989894 220849 0.971753 0.992462 0.812221 23281 1 76 0.00192071 179 0 7.62756e+07 0.0279598 331677 7.6855e+07 7.96655e+06 23305 3.79296e+07 0 0.159532 0.992462 0.806099 7.62756e+07 0.00309375 1.66991e+07 7.36378e+06 1.6837e+07 188 1.67801e+07 1.35624e+07 0.00250571 1.69487e+07 50.25 0.00431562 0.99503 0 50.2056 GTEX-145LV-5001-SM-AN41H B1 Heart Heart - Left Ventricle 0006566 411 ChIP-Seq GTEX-145LV-5019-SM-AN41K B1 Muscle Muscle - Skeletal 0011907 492 ChIP-Seq GTEX-145ME-0126-SM-5S2QM 1 B1 2 pieces, ~20 adherent fat, delineated, no abnormalities 6.6 Thyroid Thyroid 0002046 209 1057 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992754 125651 0.968215 0.993789 0.754846 22635 1 76 0.00205945 113 0 5.23092e+07 0.031393 122134 5.26361e+07 3.03613e+06 22658 2.60542e+07 0 0.213369 0.993789 0.750158 5.23092e+07 0.00274255 1.14116e+07 4.98826e+06 1.15635e+07 121 1.1521e+07 7.98959e+06 0.00240065 1.15056e+07 49.9666 0.00232035 0.994824 0 50.3306 GTEX-145ME-0226-SM-5S2QN 1 B1 2 pieces, focal acute bronchitis/peribronchitis, rep delineated. 7.4 Lung Lung 0008952 212 1054 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.99207 216187 0.974827 0.993645 0.809978 22792 1 76 0.0019851 171 0 7.89044e+07 0.0246479 219720 7.94091e+07 3.97327e+06 22817 3.92719e+07 0 0.16485 0.993645 0.80483 7.89044e+07 0.00279621 1.73841e+07 6.70522e+06 1.76214e+07 191 1.75792e+07 1.42477e+07 0.00239002 1.75457e+07 49.9523 0.00276694 0.99522 0 50.3389 GTEX-145ME-0326-SM-5S2QO 1 B1 2 pieces, well-preserved, Islets well visualized; rep delineated 6.4 Pancreas Pancreas 0001150 224 1042 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99338 213597 0.973354 0.994374 0.848153 20040 1 76 0.00216786 108 0 5.35123e+07 0.0264432 196656 5.3815e+07 2.99708e+06 20051 2.66483e+07 0 0.125201 0.994374 0.843381 5.35123e+07 0.00294114 1.21643e+07 1.79691e+07 1.23966e+07 115 1.23045e+07 1.50931e+07 0.00255411 1.23173e+07 50.026 0.0036543 0.995368 0 50.4729 GTEX-145ME-0426-SM-5S2QP 1 B1 6 pieces, ~ 5% 'contaminant' squamous mucosa, rep delineated 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 240 1026 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 EXCLUDE 0.992026 151315 0.975081 0.993324 0.808218 22248 1 76 0.00211654 139 0 5.85443e+07 0.0245222 407015 5.89378e+07 3.51781e+06 22260 2.91578e+07 0 0.166863 0.993324 0.802822 5.85443e+07 0.00286057 1.28294e+07 6.16983e+06 1.30373e+07 140 1.29783e+07 9.98629e+06 0.00248807 1.29626e+07 49.9697 0.00690584 0.994621 0 50.4018 GTEX-145ME-0526-SM-5QGQV 1 B1 6 pieces, squamous mucosa up to ~0.3mm, ~10% thickness 8.6 Esophagus Esophagus - Mucosa 0006920 250 1016 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.99176 176818 0.977626 0.993375 0.817289 22227 1 76 0.00216359 131 0 6.10614e+07 0.0220403 230247 6.14686e+07 4.62279e+06 22242 3.04155e+07 0 0.160337 0.993375 0.811875 6.10614e+07 0.00307853 1.36922e+07 7.22712e+06 1.37736e+07 136 1.37822e+07 1.21556e+07 0.00262031 1.37808e+07 49.9975 0.00374577 0.99499 0 50.1482 GTEX-145ME-0626-SM-5O99Q 1 B1 6 pieces, all muscularis, good specimens 8.5 Esophagus Esophagus - Muscularis 0004648 255 1011 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.989992 272835 0.976489 0.993217 0.828609 21919 1 76 0.00229487 171 0 7.6758e+07 0.0232623 601569 7.72823e+07 1.07295e+07 21938 3.81648e+07 0 0.14788 0.993217 0.822989 7.6758e+07 0.00380821 1.65831e+07 7.80988e+06 1.67096e+07 185 1.66969e+07 1.32964e+07 0.00304908 1.68255e+07 50.1919 0.00778405 0.996441 0 50.1899 GTEX-145ME-0726-SM-5O9A3 1 B1 2 pieces, ~10% interstitial mesothelial hyperplasia 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 256 1010 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.990151 241273 0.976139 0.993372 0.827108 22154 1 76 0.00232656 144 0 6.37261e+07 0.0235553 394377 6.41513e+07 7.89038e+06 22173 3.16833e+07 0 0.149032 0.993372 0.821625 6.37261e+07 0.00382676 1.39926e+07 6.58433e+06 1.41023e+07 154 1.40932e+07 1.07675e+07 0.00307423 1.42012e+07 50.1909 0.00614761 0.996593 0 50.1953 GTEX-145ME-0826-SM-5O9AF 1 B1 6 pieces, mucosa completely sloughed 7.9 Colon Colon - Transverse 0001157 272 994 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987419 270004 0.976734 0.991827 0.836779 23114 1 76 0.00232165 211 0 8.53764e+07 0.0229627 710429 8.608e+07 1.1693e+07 23134 4.24056e+07 0 0.139954 0.991827 0.82994 8.53764e+07 0.00372647 1.85269e+07 8.58922e+06 1.86131e+07 233 1.86668e+07 1.51706e+07 0.00302094 1.88223e+07 50.2074 0.00825313 0.996235 0 50.116 GTEX-145ME-0926-SM-5O9AR 1 B1 6 pieces, well preserved; lymphoid aggregates 30-40% of tissue, rep delineated 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 281 985 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987263 240444 0.969131 0.991058 0.789888 24613 1 76 0.00275482 163 0 7.83081e+07 0.0298456 475710 7.90146e+07 1.03142e+07 24642 3.88734e+07 0 0.179243 0.991058 0.782825 7.83081e+07 0.00425566 1.71391e+07 9.84372e+06 1.72299e+07 179 1.72512e+07 1.25244e+07 0.00350237 1.74031e+07 50.2192 0.00602053 0.994854 0 50.1321 GTEX-145ME-1026-SM-5O9B4 1 B1 6 pieces, mucosa up to ~0.6mm, 20-50% thickness 7.4 Stomach Stomach 0000945 287 979 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986748 186149 0.971154 0.989808 0.779135 23006 1 76 0.00283526 167 0 6.47375e+07 0.0279911 505972 6.54041e+07 8.51291e+06 23028 3.21665e+07 0 0.19202 0.989808 0.771193 6.47375e+07 0.0042503 1.43551e+07 1.06203e+07 1.44354e+07 149 1.44421e+07 1.01739e+07 0.00354059 1.45395e+07 50.1681 0.00773609 0.992867 0 50.1394 GTEX-145ME-1126-SM-5SIAT 1 B1 6 pieces, muscularis; adherent fat on some sections, up to ~2.5mm 6.9 Colon Colon - Sigmoid 0001159 303 963 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990056 203766 0.974902 0.993343 0.820141 22693 1 76 0.00209705 207 0 8.10205e+07 0.024806 565098 8.15634e+07 8.09932e+06 22720 4.02882e+07 0 0.15476 0.993343 0.814681 8.10205e+07 0.00311602 1.75569e+07 8.00349e+06 1.76104e+07 217 1.76259e+07 1.38654e+07 0.00260485 1.77902e+07 50.232 0.00692832 0.99663 0 50.0761 GTEX-145ME-1226-SM-5SIB6 1 B1 2 pieces. No abnormalities 7.3 Ovary Ovary 0000992 296 970 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991973 292330 0.965809 0.993988 0.744659 23492 1 76 0.00205903 210 0 9.35298e+07 0.0339555 123632 9.40955e+07 8.33658e+06 23537 4.65718e+07 0 0.221151 0.993988 0.740182 9.35298e+07 0.00292246 2.04546e+07 1.21479e+07 2.06239e+07 246 2.0611e+07 1.57205e+07 0.00248987 2.06463e+07 50.0428 0.0013139 0.996002 0 50.2061 GTEX-145ME-1326-SM-5O98Q 1 B1 2 pieces, all myometrium; no abnormalities 8.5 Uterus Uterus 0000995 299 967 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.990531 211149 0.970927 0.993315 0.780151 22890 1 76 0.00225216 168 0 7.85769e+07 0.0287448 132396 7.91057e+07 9.82068e+06 22924 3.90916e+07 0 0.190775 0.993315 0.774936 7.85769e+07 0.00338436 1.70387e+07 6.86389e+06 1.71915e+07 174 1.72152e+07 1.42316e+07 0.00281667 1.72233e+07 50.0117 0.00167366 0.9961 0 50.2232 GTEX-145ME-1326-SM-EZ6Y4 1 B1 2 pieces, all myometrium; no abnormalities Uterus Uterus 0000995 299 967 BP-49518 DNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-145ME-1426-SM-5RQJS 1 B1 6 pieces, squmous mucosa is ~0.2-0.3mm 7.2 Vagina Vagina 0000996 302 964 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99122 165515 0.973267 0.992443 0.784794 22783 1 76 0.00239162 132 0 6.2779e+07 0.0265004 169865 6.3257e+07 3.33476e+06 22800 3.12512e+07 0 0.188473 0.992443 0.778863 6.2779e+07 0.00331756 1.38873e+07 7.07566e+06 1.40161e+07 143 1.39934e+07 1.07345e+07 0.00285402 1.39884e+07 49.9909 0.00268531 0.993666 0 50.2307 GTEX-145ME-1426-SM-E9WQY 1 B1 6 pieces, squmous mucosa is ~0.2-0.3mm Vagina Vagina 0000996 302 964 BP-49627 DNA Extraction from Paxgene-derived Lysate Plate Based 02/19/2014 LCSET-10779 04/15/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-145ME-1526-SM-5Q5F2 0 B1 2 pieces, mainly adipose tissue, trace TDLU's present, no abnormalities, rep delineated 5.9 Breast Breast - Mammary Tissue 0008367 305 961 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990704 136650 0.975987 0.993206 0.825168 22030 1 76 0.00246597 194 0 7.8706e+07 0.0234764 610777 7.92443e+07 1.0632e+07 22053 3.91339e+07 0 0.150819 0.993206 0.819562 7.8706e+07 0.00403874 1.73453e+07 8.44782e+06 1.73686e+07 205 1.73287e+07 1.18542e+07 0.00325037 1.75709e+07 50.3469 0.00770752 0.995708 0 50.0336 GTEX-145ME-1626-SM-5RQI3 0 B1 2 pieces, 60% glandular parenchyma/ductal elements. Fibrosis/chronic inflammation/sialadenitis 8.1 Salivary Gland Minor Salivary Gland 0006330 283 983 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.988548 196973 0.970369 0.989367 0.781562 23810 1 76 0.00322884 170 0 7.47106e+07 0.026964 159162 7.55135e+07 3.6019e+06 23837 3.71064e+07 0 0.188808 0.989367 0.773252 7.47106e+07 0.00390286 1.66392e+07 1.25957e+07 1.67236e+07 170 1.67498e+07 1.21819e+07 0.00356557 1.66758e+07 49.8892 0.00210773 0.990187 0 50.1264 GTEX-145ME-1726-SM-5Q5EU 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 310 956 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989631 146476 0.973658 0.992114 0.826129 23535 1 76 0.00246076 281 0 8.74661e+07 0.0261442 737575 8.81613e+07 1.25428e+07 23560 4.35135e+07 0 0.147529 0.992114 0.819614 8.74661e+07 0.00383332 1.91871e+07 1.02096e+07 1.93529e+07 265 1.92659e+07 1.3212e+07 0.00314532 1.9476e+07 50.2711 0.0083662 0.994597 0 50.215 GTEX-145ME-1826-SM-5SI9G 0 B1 6 pieces, minimal/negative dermal fat; squamous epithelium is ~70 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 315 951 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990658 187397 0.971185 0.992781 0.790892 23468 1 76 0.00217807 303 0 9.1427e+07 0.02854 325627 9.20918e+07 8.87404e+06 23498 4.55126e+07 0 0.180293 0.992781 0.785183 9.1427e+07 0.00327205 1.98597e+07 1.06307e+07 1.99206e+07 257 1.99069e+07 1.51233e+07 0.00272389 2.0062e+07 50.194 0.0035359 0.994905 0 50.0766 GTEX-145ME-1926-SM-5MR6T 0 B1 2 pieces; ~5-10% interstitial fascia/fibrous tissue; rep delineated 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 326 940 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992452 198179 0.976787 0.994258 0.827919 21965 1 76 0.00221076 208 0 8.08321e+07 0.0228472 668811 8.12989e+07 7.80355e+06 21984 4.02571e+07 0 0.148868 0.994258 0.823165 8.08321e+07 0.00328263 1.77164e+07 9.31131e+06 1.78058e+07 230 1.77694e+07 1.35119e+07 0.00274572 1.78889e+07 50.1676 0.00822656 0.996064 0 50.1259 GTEX-145ME-1926-SM-5SI9S 0 B1 2 pieces; ~5-10% interstitial fascia/fibrous tissue; rep delineated 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 326 940 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 EXCLUDE 0.992452 198179 0.976787 0.994258 0.827919 21965 1 76 0.00221076 208 0 8.08321e+07 0.0228472 668811 8.12989e+07 7.80355e+06 21984 4.02571e+07 0 0.148868 0.994258 0.823165 8.08321e+07 0.00328263 1.77164e+07 9.31131e+06 1.78058e+07 230 1.77694e+07 1.35119e+07 0.00274572 1.78889e+07 50.1676 0.00822656 0.996064 0 50.1259 GTEX-145ME-2026-SM-5SIA5 0 B1 2 pieces, trace-minimal interstitial fat 8 Muscle Muscle - Skeletal 0011907 327 939 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992329 230907 0.983883 0.994609 0.871489 20002 1 76 0.00211975 273 0 9.92318e+07 0.015936 1.11075e+06 9.97697e+07 9.69282e+06 20012 4.94278e+07 0 0.112395 0.994609 0.866791 9.92318e+07 0.00305472 2.18262e+07 1.91486e+07 2.17986e+07 284 2.18278e+07 1.97596e+07 0.00258617 2.19895e+07 50.1846 0.0111331 0.996889 0 49.9684 GTEX-145ME-2126-SM-5SIAH 0 B1 2 pieces, extensive adherent fat, rims of up to ~1.5mm, delineated 6.2 Nerve Nerve - Tibial 0001323 331 935 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987892 230425 0.965642 0.991415 0.76248 24252 1 76 0.00213113 225 0 9.01367e+07 0.0340662 412438 9.09172e+07 9.78277e+06 24289 4.47948e+07 0 0.203162 0.991415 0.755934 9.01367e+07 0.00314449 1.96717e+07 8.57867e+06 1.98031e+07 240 1.98318e+07 1.39481e+07 0.00263601 1.995e+07 50.1486 0.00453641 0.994938 0 50.1664 GTEX-145ME-2226-SM-5S2VY 0 B1 2 pieces, good clean specimens, no adherent fat, no atherosis 7.4 Blood Vessel Artery - Tibial 0007610 333 933 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991772 181763 0.979178 0.993979 0.864613 20607 1 76 0.00198296 161 0 7.17326e+07 0.0204063 273088 7.21671e+07 7.31424e+06 20616 3.56969e+07 0 0.114565 0.993979 0.859408 7.17326e+07 0.0030421 1.54362e+07 5.72678e+06 1.5537e+07 171 1.5508e+07 1.5153e+07 0.00251136 1.56208e+07 50.1811 0.00378411 0.996187 0 50.1628 GTEX-145ME-5001-SM-7IGOL B1 5.9 Lung Lung 0008952 221 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6446 03/04/2015 TruSeq.v1 EXCLUDE 0.995731 590260 0.971782 0.996041 0.850028 22647 1 76 0.0021016 209 0 7.79466e+07 0.0276999 234207 7.82565e+07 2.51855e+06 22667 3.88517e+07 0 0.121754 0.996041 0.846662 7.79466e+07 0.00247957 1.7182e+07 9.91666e+06 1.73158e+07 211 1.73250e+07 1.49492e+07 0.00229053 1.72079e+07 49.8304 0.00299281 0.99635 0 50.1939 GTEX-145ME-5001-SM-AN41C B1 Lung Lung 0008952 221 ChIP-Seq GTEX-145ME-5004-SM-7MGXP B1 5.9 Esophagus Esophagus - Mucosa 0006920 250 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991713 279302 0.974795 0.99359 0.858768 21177 1 76 0.00295443 163 0 7.32699e+07 0.0248866 399500 7.37426e+07 5.72186e+06 21188 3.65097e+07 0 0.116027 0.99359 0.853263 7.32699e+07 0.00373547 1.64138e+07 1.51632e+07 1.65962e+07 169 1.65969e+07 1.50392e+07 0.00334421 1.65451e+07 49.9218 0.00541749 0.995467 0 50.2763 GTEX-145ME-5007-SM-7DHN8 B1 8.1 Esophagus Esophagus - Muscularis 0004648 255 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991932 209962 0.975466 0.992905 0.834647 22629 1 76 0.00355836 216 0 8.23645e+07 0.0241985 503969 8.29531e+07 5.96817e+06 22651 4.10101e+07 0 0.140818 0.992905 0.828725 8.23645e+07 0.00502896 1.77454e+07 8.48704e+06 1.79102e+07 212 1.79345e+07 1.51436e+07 0.00429294 1.77901e+07 49.7978 0.00607535 0.993878 0 50.2311 GTEX-145ME-5010-SM-793AR B1 8.4 Breast Breast - Mammary Tissue 0008367 306 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 EXCLUDE 0.992983 385722 0.974002 0.993498 0.848124 20711 1 76 0.00244275 145 0 6.25814e+07 0.0254435 349222 6.29909e+07 5.72656e+06 20728 3.1101e+07 0 0.125878 0.993498 0.842609 6.25814e+07 0.00294828 1.38363e+07 7.77135e+06 1.37679e+07 159 1.3896e+07 1.07744e+07 0.00269538 1.37474e+07 49.7313 0.005544 0.994013 0 49.8762 GTEX-145ME-5016-SM-7938P B1 8.6 Muscle Muscle - Skeletal 0011907 327 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6376 01/14/2015 TruSeq.v1 EXCLUDE 0.995768 387674 0.975839 0.996494 0.866754 18576 1 76 0.00187812 128 0 6.03423e+07 0.0239688 597369 6.05546e+07 2.52092e+06 18584 3.00883e+07 0 0.109085 0.996494 0.863715 6.03423e+07 0.00221956 1.32088e+07 9.9385e+06 1.3277e+07 140 1.331e+07 1.25268e+07 0.00204872 1.32131e+07 49.8174 0.00986496 0.99722 0 50.1288 GTEX-145ME-5016-SM-AN41F B1 Muscle Muscle - Skeletal 0011907 327 ChIP-Seq GTEX-145MF-0004-SM-5DU4B B1 Blood Whole Blood 0013756 685 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MF-0004-SM-5HJQO B1 Blood Whole Blood 0013756 685 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-145MF-0004-SM-7DRP1 B1 Blood Whole Blood 0013756 685 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MF-0426-SM-5LU9T 0 B1 2 pieces, ~50% occlusive atherosis, delineated; good clean specimens 6.9 Blood Vessel Artery - Tibial 0007610 933 986 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990497 353641 0.974301 0.992464 0.828272 21213 1 76 0.00436788 141 0 7.00654e+07 0.0252914 308499 7.05973e+07 5.9824e+06 21228 3.48119e+07 0 0.14603 0.992464 0.82203 7.00654e+07 0.00373363 1.49423e+07 5.70112e+06 1.50344e+07 152 1.50131e+07 1.37e+07 0.00405138 1.51045e+07 50.1517 0.00436984 0.994432 0 50.1536 GTEX-145MF-0526-SM-5LUA6 0 B1 2 pieces, ~10% interstitial fascial/fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 937 982 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990484 242629 0.974974 0.992636 0.804469 22963 1 76 0.00444827 151 0 6.87318e+07 0.0246878 396542 6.92417e+07 6.15020e+06 22982 3.41625e+07 0 0.170504 0.992636 0.798545 6.87318e+07 0.00375429 1.50365e+07 6.95846e+06 1.51426e+07 153 1.51198e+07 1.19751e+07 0.00410203 1.52055e+07 50.1412 0.00572692 0.994788 0 50.1757 GTEX-145MF-0626-SM-5LUAI 0 B1 6 pieces, trace adherent dermal fat; squamous epithelium is ~50 microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 934 985 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989279 276330 0.971621 0.991638 0.771987 22919 1 76 0.00455519 134 0 6.27247e+07 0.0281516 355273 6.32537e+07 5.33853e+06 22949 3.11653e+07 0 0.199635 0.991638 0.765531 6.27247e+07 0.00402298 1.375e+07 7.51074e+06 1.37894e+07 137 1.37899e+07 1.02701e+07 0.00428972 1.3897e+07 50.1934 0.00561664 0.993996 0 50.0714 GTEX-145MF-0726-SM-5Q5BT 1 B1 2 pieces, moderate congestion 8.1 Lung Lung 0008952 953 966 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.987108 141718 0.972332 0.989912 0.739691 24024 1 76 0.00243291 134 0 6.87791e+07 0.0264241 231235 6.948e+07 5.06736e+06 24064 3.41387e+07 0 0.232641 0.989912 0.732229 6.87791e+07 0.00351265 1.52514e+07 7.07752e+06 1.53559e+07 150 1.5359e+07 1.10397e+07 0.00297125 1.54398e+07 50.1311 0.00332808 0.992716 0 50.1708 GTEX-145MF-0826-SM-5QGQA 1 B1 2 pieces, mild congestion, mild chronic hepatitis. No significant steatosis. 6.4 Liver Liver 0001114 955 964 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992073 255096 0.970157 0.994004 0.842019 19727 1 76 0.00176052 117 0 5.57112e+07 0.0296498 778918 5.60472e+07 3.46529e+06 19739 2.77379e+07 0 0.128138 0.994004 0.83697 5.57112e+07 0.0028582 1.20178e+07 9.83771e+06 1.21203e+07 133 1.20863e+07 1.10162e+07 0.00230829 1.21536e+07 50.139 0.0138975 0.995934 0 50.2124 GTEX-145MF-0926-SM-5Q5EA 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 958 961 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989001 243559 0.973316 0.992202 0.766281 24279 1 76 0.0021739 176 0 8.1956e+07 0.0264211 384499 8.26001e+07 1.02195e+07 24311 4.07277e+07 0 0.207035 0.992202 0.760305 8.1956e+07 0.00407988 1.80547e+07 1.0439e+07 1.81744e+07 188 1.81867e+07 1.33543e+07 0.00312381 1.83006e+07 50.1562 0.00465495 0.995402 0 50.1652 GTEX-145MF-1026-SM-5Q5EQ 1 B1 2 pieces no abnormalities 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 952 967 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991285 170416 0.976389 0.993277 0.823604 23013 1 76 0.00216211 205 0 8.1668e+07 0.0233379 1.20214e+06 8.22208e+07 9.47939e+06 23031 4.06415e+07 0 0.152785 0.993277 0.818067 8.1668e+07 0.00345028 1.79666e+07 1.04422e+07 1.8055e+07 254 1.79415e+07 1.21191e+07 0.0028049 1.82442e+07 50.4182 0.0146209 0.99527 0 50.1227 GTEX-145MF-1426-SM-5O9B6 1 B1 6 pieces, squamous mucosa is ~0.3mm, 20-25% thickness 8.1 Esophagus Esophagus - Mucosa 0006920 971 948 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987653 204212 0.978842 0.991418 0.767862 21950 1 76 0.0023205 124 0 6.16631e+07 0.02072 406162 6.21969e+07 8.36461e+06 21965 3.06351e+07 0 0.21098 0.991418 0.761272 6.16631e+07 0.00386871 1.39155e+07 8.12979e+06 1.40464e+07 135 1.41095e+07 1.06141e+07 0.00309166 1.40851e+07 49.9568 0.00653027 0.995182 0 50.2341 GTEX-145MF-1526-SM-5LU95 1 B1 6 pieces, all muscularis 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 976 943 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989727 269694 0.970743 0.991814 0.786152 23136 1 76 0.00452265 145 0 6.84677e+07 0.0290204 930430 6.90328e+07 5.90782e+06 23159 3.40206e+07 0 0.184591 0.991814 0.779716 6.84677e+07 0.00392815 1.48651e+07 6.26172e+06 1.49811e+07 154 1.49508e+07 1.03855e+07 0.00422602 1.50384e+07 50.1461 0.0134781 0.993901 0 50.1944 GTEX-145MF-1726-SM-5LU9H 3 B1 2 pieces, tubules too autolyzed to assess spermatogenesis 5.8 Testis Testis 0000473 985 934 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988486 333382 0.940052 0.990688 0.712085 30504 1 76 0.00464511 122 0 5.80851e+07 0.059713 724614 5.86311e+07 5.00645e+06 30547 2.88536e+07 0 0.227968 0.990688 0.705454 5.80851e+07 0.0040482 1.24092e+07 8.33064e+06 1.24585e+07 124 1.24706e+07 7.76396e+06 0.00434732 1.25209e+07 50.1007 0.0123589 0.99289 0 50.0993 GTEX-145MF-2226-SM-7EPIR 1 B1 2 pieces, gynecomastoid stromal/ductal hyperplasia; rep. ductal elements delineated 5.7 Breast Breast - Mammary Tissue 0008367 1010 909 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989558 164441 0.978006 0.991865 0.857904 22688 1 76 0.00300914 165 0 9.09481e+07 0.0217084 1.46561e+06 9.1694e+07 1.23699e+07 22707 4.52726e+07 0 0.120103 0.991865 0.850925 9.09481e+07 0.0116348 1.99675e+07 1.21093e+07 2.04283e+07 188 2.04292e+07 1.45557e+07 0.00731194 2.01582e+07 49.6662 0.0159837 0.994172 0 50.5704 GTEX-145MF-2626-SM-5O98S 1 B1 1 piece, adenohypophysis only 7.3 Pituitary Pituitary 0000007 1065 854 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988357 396198 0.957052 0.992032 0.758465 25533 1 76 0.00220616 161 0 8.33949e+07 0.0426636 252128 8.40647e+07 1.11306e+07 25571 4.14455e+07 0 0.198586 0.992032 0.752422 8.33949e+07 0.00349445 1.766e+07 1.5825e+07 1.77925e+07 192 1.78837e+07 1.38911e+07 0.00284792 1.78597e+07 49.9664 0.00299921 0.995707 0 50.1868 GTEX-145MF-2726-SM-5O995 1 B1 2 piece, no abnormalities 6.5 Brain Brain - Cortex 0001870 1069 850 BP-47675 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.988375 414216 0.960093 0.992078 0.819596 23314 1 76 0.00209963 267 0 7.59164e+07 0.0395483 2.87556e+06 7.65226e+07 1.0394e+07 23328 3.77348e+07 0 0.140497 0.992078 0.813103 7.59164e+07 0.00348466 1.66639e+07 2.2535e+07 1.6485e+07 259 1.65218e+07 8.81035e+06 0.00278956 1.68738e+07 50.527 0.037578 0.995781 0 49.7302 GTEX-145MF-2826-SM-7EPGU 1 B1 2 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 1070 849 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989636 419621 0.941372 0.992119 0.720333 24365 1 76 0.00333929 108 0 8.33049e+07 0.0581706 896223 8.39667e+07 1.13031e+07 24398 4.14676e+07 0 0.221038 0.992119 0.714656 8.33049e+07 0.0118334 1.78229e+07 2.12119e+07 1.8066e+07 136 1.81444e+07 1.12277e+07 0.00757573 1.79351e+07 49.7098 0.0106736 0.994602 0 50.3388 GTEX-145MG-0002-SM-5DU3Z B1 Blood Whole Blood 0013756 1041 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MG-0002-SM-5HJQB B1 Blood Whole Blood 0013756 1041 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-145MG-0002-SM-7DROJ B1 Blood Whole Blood 0013756 1041 BP-45676 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/12/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MG-0011-R10a-SM-5PNWG B1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 1070 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993069 2.80094e+06 0.953346 0.994423 0.849127 26888 1 76 0.00222836 387 0 2.63814e+08 0.0460533 8.41025e+06 2.65293e+08 2.53036e+07 26923 1.31447e+08 0 0.10422 0.994423 0.844391 2.63814e+08 0.00301102 5.68256e+07 9.52255e+07 5.70336e+07 408 5.68968e+07 3.70256e+07 0.00261916 5.73288e+07 50.1891 0.0317017 0.995778 0 50.0914 GTEX-145MG-0011-R10a-SM-AHZ7D B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1070 ChIP-Seq GTEX-145MG-0011-R10a-SM-CYKO9 B1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 1070 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 RIP-Seq GTEX-145MG-0011-R3b-SM-5SI67 B1, A1 8.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1070 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990673 860867 0.954163 0.993499 0.828568 22609 1 76 0.00299632 265 0 8.50114e+07 0.0456153 6.70959e+06 8.55676e+07 7.41489e+06 22621 4.22966e+07 0 0.125594 0.993499 0.823182 8.50114e+07 0.00429887 1.82521e+07 3.82515e+07 1.83635e+07 307 1.81135e+07 6.85308e+06 0.00364574 1.87329e+07 50.8405 0.0784127 0.996325 0 50.1521 GTEX-145MG-0011-R5b-SM-5S2VU B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 1070 BP-48370 RNA isolation_PAXgene Tissue miRNA 01/15/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992387 791034 0.952891 0.994294 0.821465 19847 1 76 0.00343724 191 0 7.19903e+07 0.0470098 7.26194e+06 7.24034e+07 6.11963e+06 19855 3.5864e+07 0 0.131425 0.994294 0.816778 7.19903e+07 0.00444122 1.52985e+07 4.79334e+07 1.53256e+07 243 1.49497e+07 3.33954e+06 0.00393826 1.57946e+07 51.3741 0.100298 0.996201 0 50.0442 GTEX-145MG-0011-R7b-SM-5P9JY B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1070 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990026 1.00014e+06 0.953305 0.99057 0.807583 22985 1 76 0.00427269 268 0 1.03505e+08 0.0465332 8.30713e+06 1.0449e+08 3.52595e+06 23001 5.15803e+07 0 0.145722 0.99057 0.799967 1.03505e+08 0.00450816 2.17494e+07 5.67498e+07 2.2369e+07 318 2.19579e+07 7.12157e+06 0.00439036 2.22011e+07 50.2753 0.0795014 0.991113 0 50.7022 GTEX-145MG-0126-SM-5TDDA 1 B1 2 pieces; 1 piece has 20% fibrous content 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1141 589 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986783 292171 0.977038 0.99049 0.810193 22400 1 76 0.00247819 127 0 5.60928e+07 0.0225853 156879 5.66313e+07 7.18108e+06 22418 2.78181e+07 0 0.166844 0.99049 0.802488 5.60928e+07 0.00461818 1.23612e+07 5.1443e+06 1.24115e+07 129 1.2474e+07 1.07164e+07 0.00354418 1.25028e+07 50.0577 0.00277018 0.994197 0 50.1015 GTEX-145MG-0226-SM-5TDDB 0 B1 2 pieces; striations clearly visible 8 Muscle Muscle - Skeletal 0011907 1142 588 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989951 244202 0.983912 0.993123 0.884147 19686 1 76 0.00240379 128 0 7.35028e+07 0.0158908 729382 7.40118e+07 9.33345e+06 19694 3.655e+07 0 0.0997656 0.993123 0.878067 7.35028e+07 0.00410107 1.59737e+07 6.78363e+06 1.60068e+07 158 1.60559e+07 1.57338e+07 0.00324972 1.61412e+07 50.1325 0.00985495 0.996295 0 50.0516 GTEX-145MG-0226-SM-CYKOM 0 B1 2 pieces; striations clearly visible 8 Muscle Muscle - Skeletal 0011907 1142 588 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-145MG-0826-SM-5Q5C2 2 B1 2 pieces 6.7 Thyroid Thyroid 0002046 1237 493 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.987294 205476 0.966549 0.989638 0.803978 23275 1 76 0.00205004 128 0 5.65984e+07 0.0331074 170959 5.7191e+07 4.30666e+06 23292 2.81242e+07 0 0.162571 0.989638 0.795647 5.65984e+07 0.00316928 1.2348e+07 7.48433e+06 1.24365e+07 136 1.24229e+07 9.93774e+06 0.00260834 1.24949e+07 50.1444 0.00298926 0.991981 0 50.1784 GTEX-145MG-1526-SM-5Q5EM 0 B1 6 pieces; well trimmed; <5% dermal fat 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1259 471 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988626 165605 0.975264 0.991749 0.842823 24442 1 76 0.00246837 227 0 8.56303e+07 0.0244977 628621 8.63426e+07 1.17332e+07 24462 4.25569e+07 0 0.132442 0.991749 0.835869 8.56303e+07 0.00409124 1.87492e+07 1.05523e+07 1.88494e+07 237 1.88126e+07 1.46182e+07 0.00327725 1.9041e+07 50.3017 0.00728054 0.994873 0 50.1332 GTEX-145MG-3026-SM-5RQJA 2 B1 2 pieces 7.1 Brain Brain - Cortex 0001870 1318 412 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992286 381680 0.959334 0.993722 0.839952 22976 1 76 0.00267241 157 0 6.75357e+07 0.0404008 3.04485e+06 6.79624e+07 3.36706e+06 22984 3.36163e+07 0 0.119382 0.993722 0.834678 6.75357e+07 0.00354771 1.4656e+07 1.33582e+07 1.49107e+07 196 1.47897e+07 7.25762e+06 0.00310943 1.48652e+07 50.1272 0.044802 0.995157 0 50.4307 GTEX-145MG-3126-SM-5Q5D3 1 B1 2 pieces 6.3 Brain Brain - Cerebellum 0002037 1320 410 BP-48057 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.968536 235556 0.950852 0.970733 0.771199 23165 1 76 0.00278706 192 0 7.61467e+07 0.0489289 2.3147e+06 7.84425e+07 9.90725e+06 23190 3.78656e+07 0 0.179653 0.970733 0.748628 7.61467e+07 0.00432849 1.65088e+07 1.36642e+07 1.65638e+07 203 1.64528e+07 7.168e+06 0.00355603 1.67752e+07 50.4851 0.0295083 0.97293 0 50.0831 GTEX-145MH-0001-SM-5GYC7 C1 Blood Whole Blood 0013756 1077 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MH-0001-SM-5HJR6 C1 Blood Whole Blood 0013756 1077 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-145MH-0001-SM-7DRP2 C1 Blood Whole Blood 0013756 1077 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6341 02/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MH-0011-R10a-SM-AHZN7 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1076 ChIP-Seq GTEX-145MH-0011-R10b-SM-5PNUK C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 1076 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993647 772678 0.952648 0.994915 0.827415 23660 1 76 0.00197135 269 0 8.23436e+07 0.0467298 1.69327e+06 8.27645e+07 7.18018e+06 23682 4.1028e+07 0 0.125233 0.994915 0.823207 8.23436e+07 0.0027951 1.78364e+07 2.11488e+07 1.7906e+07 258 1.78677e+07 1.16453e+07 0.0023827 1.79785e+07 50.1545 0.0204589 0.996183 0 50.0973 GTEX-145MH-0011-R11a-SM-5P9HQ C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 1076 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.990537 936938 0.936668 0.991061 0.741772 24698 1 76 0.00339891 274 0 1.18045e+08 0.0628882 1.2251e+06 1.19109e+08 3.96685e+06 24732 5.87755e+07 0 0.194896 0.991061 0.735141 1.18045e+08 0.00364273 2.52365e+07 3.27621e+07 2.53174e+07 307 2.52745e+07 1.52724e+07 0.00352076 2.53522e+07 50.0768 0.0102855 0.991584 0 50.0801 GTEX-145MH-0011-R1b-SM-5PNWY C1, A1 6.8 Brain Brain - Hippocampus 0001954 1076 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991312 920292 0.958031 0.99262 0.839031 24206 1 76 0.00326983 374 0 1.06662e+08 0.0414998 4.38350e+06 1.07455e+08 3.10284e+06 24226 5.30962e+07 0 0.119 0.99262 0.832839 1.06662e+08 0.00379391 2.30893e+07 2.86715e+07 2.34589e+07 350 2.32823e+07 1.29841e+07 0.00353153 2.34011e+07 50.1272 0.0407937 0.993929 0 50.397 GTEX-145MH-0011-R3b-SM-5P9JQ C1, A1 8.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1076 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99268 1.0816e+06 0.948668 0.993266 0.822315 24459 1 76 0.00325868 271 0 1.01448e+08 0.0507458 2.54596e+06 1.02136e+08 3.26853e+06 24480 5.05455e+07 0 0.126353 0.993266 0.816778 1.01448e+08 0.00346818 2.18991e+07 3.07594e+07 2.20753e+07 292 2.20002e+07 1.40698e+07 0.00336337 2.20378e+07 50.0427 0.0249272 0.993852 0 50.2004 GTEX-145MH-0011-R5a-SM-5P9JT C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 1076 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.9917 1.22103e+06 0.943242 0.992198 0.793616 25002 1 76 0.00337846 270 0 1.11422e+08 0.0563454 4.47902e+06 1.12298e+08 3.66786e+06 25027 5.55136e+07 0 0.149626 0.992198 0.787424 1.11422e+08 0.00359403 2.3891e+07 4.71003e+07 2.38918e+07 311 2.3883e+07 1.2648e+07 0.00348619 2.39788e+07 50.1001 0.0398852 0.992696 0 50.0008 GTEX-145MH-0011-R6a-SM-5PNZ7 C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1076 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991484 1.56116e+06 0.958694 0.992152 0.846518 25885 1 76 0.00311785 381 0 1.94668e+08 0.0406449 9.2646e+06 1.96208e+08 5.50741e+06 25912 9.69831e+07 0 0.112176 0.992152 0.839875 1.94668e+08 0.00342061 4.24228e+07 6.06606e+07 4.24703e+07 371 4.24324e+07 2.90196e+07 0.00326913 4.26156e+07 50.1077 0.0472184 0.992819 0 50.028 GTEX-145MH-0011-R7a-SM-5PNWH C1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 1076 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.992349 829714 0.950327 0.994182 0.818711 23554 1 76 0.0021204 269 0 8.86513e+07 0.0492563 3.71796e+06 8.91701e+07 8.84964e+06 23569 4.41535e+07 0 0.131616 0.994182 0.813948 8.86513e+07 0.00310193 1.90795e+07 3.3835e+07 1.9119e+07 278 1.91419e+07 1.09394e+07 0.00261026 1.92127e+07 50.0924 0.0416951 0.996015 0 50.0517 GTEX-145MH-0011-R8a-SM-5PNUL C1, A1 6.4 Brain Brain - Hypothalamus 0001898 1076 BP-48302 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993231 462044 0.958903 0.99484 0.835694 22255 1 76 0.00217713 158 0 6.2159e+07 0.0408029 2.8737e+06 6.24814e+07 5.28913e+06 22268 3.0959e+07 0 0.123209 0.99484 0.831382 6.2159e+07 0.00324817 1.35147e+07 1.76099e+07 1.3652e+07 189 1.35028e+07 6.27526e+06 0.00271178 1.37623e+07 50.4758 0.0459929 0.996449 0 50.2525 GTEX-145MH-0326-SM-5LU8H 1 C1 2 pieces; includes 10-15% internal fat with vessels/nerve 7.3 Muscle Muscle - Skeletal 0011907 1247 1390 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991033 305786 0.984538 0.992942 0.870261 19340 1 76 0.00433832 129 0 7.26816e+07 0.015257 761703 7.31982e+07 6.53504e+06 19348 3.61714e+07 0 0.114278 0.992942 0.864118 7.26816e+07 0.00358262 1.56361e+07 1.21136e+07 1.58314e+07 154 1.58054e+07 1.52366e+07 0.0039612 1.57968e+07 49.9863 0.010406 0.994851 0 50.3102 GTEX-145MH-0326-SM-CYKUI 1 C1 2 pieces; includes 10-15% internal fat with vessels/nerve 7.3 Muscle Muscle - Skeletal 0011907 1247 1390 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 RIP-Seq GTEX-145MH-0426-SM-5LU8T 2 C1 2 pieces; one piece is 20% fat, some fibrosis 6 Thyroid Thyroid 0002046 1273 1365 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989699 240453 0.968785 0.991832 0.813184 23614 1 76 0.00447851 137 0 6.46861e+07 0.0308509 118453 6.52188e+07 5.70962e+06 23636 3.21544e+07 0 0.155602 0.991832 0.806542 6.46861e+07 0.00387456 1.41266e+07 7.09188e+06 1.42081e+07 142 1.42198e+07 1.21745e+07 0.00417719 1.42542e+07 50.0604 0.00181624 0.993964 0 50.1437 GTEX-145MH-0626-SM-5NQAK 2 C1 2 pieces; some congestion and atelectasis, both pieces include larger vessels 6.8 Lung Lung 0008952 1278 1361 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988904 253630 0.963536 0.99172 0.759009 26024 1 76 0.00261478 168 0 8.49191e+07 0.036099 266749 8.56281e+07 1.17962e+07 26063 4.22184e+07 0 0.204527 0.99172 0.752724 8.49191e+07 0.00537271 1.8449e+07 9.20177e+06 1.86055e+07 189 1.8614e+07 1.33295e+07 0.00398983 1.86687e+07 50.0735 0.0031152 0.994536 0 50.2112 GTEX-145MH-0626-SM-CYKUL 2 C1 2 pieces; some congestion and atelectasis, both pieces include larger vessels 6.8 Lung Lung 0008952 1278 1361 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 RIP-Seq GTEX-145MH-1026-SM-5Q5CI 2 C1 6 pieces; atherosis 6.5 Blood Vessel Artery - Aorta 0001496 1288 1353 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989605 151099 0.977042 0.991065 0.802789 21407 1 76 0.00192716 135 0 6.26679e+07 0.0225968 151080 6.32328e+07 4.38582e+06 21422 3.11703e+07 0 0.174253 0.991065 0.795617 6.26679e+07 0.00290478 1.36025e+07 5.82461e+06 1.36755e+07 149 1.36342e+07 1.11589e+07 0.00241525 1.37377e+07 50.1891 0.00238927 0.992525 0 50.1337 GTEX-145MH-1226-SM-5RQJT 2 C1 6 pieces; well trimmed 6.9 Esophagus Esophagus - Muscularis 0004648 1291 1351 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992083 149229 0.969857 0.993063 0.815767 21944 1 76 0.0022351 123 0 5.70416e+07 0.0299262 700315 5.74401e+07 2.90619e+06 21961 2.84026e+07 0 0.154091 0.993063 0.810107 5.70416e+07 0.00295128 1.21727e+07 4.96331e+06 1.22835e+07 143 1.2228e+07 8.32642e+06 0.00259284 1.2282e+07 50.1102 0.0121921 0.994043 0 50.2266 GTEX-145MH-1426-SM-5QGPO 1 C1 2 pieces; include 20-30% attached and internal fat; one piece has increased numbers of Renaut bodies (? trauma) 7.4 Nerve Nerve - Tibial 0001323 1297 1346 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993125 195195 0.968067 0.994126 0.77815 23669 1 76 0.00193734 173 0 7.43267e+07 0.0316321 210322 7.47659e+07 4.83678e+06 23701 3.70323e+07 0 0.189918 0.994126 0.773579 7.43267e+07 0.00281919 1.62821e+07 6.51605e+06 1.63873e+07 175 1.63277e+07 1.22046e+07 0.00237782 1.64182e+07 50.1381 0.00281307 0.995127 0 50.1609 GTEX-145MH-1526-SM-5LUAU 1 C1 2 pieces; mild atherosis 5.7 Blood Vessel Artery - Tibial 0007610 1300 1344 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991242 245063 0.975293 0.992935 0.798391 22152 1 76 0.0045245 137 0 6.89927e+07 0.0243447 224640 6.94836e+07 5.61363e+06 22174 3.42927e+07 0 0.176902 0.992935 0.792751 6.89927e+07 0.00370172 1.49778e+07 5.48244e+06 1.50278e+07 149 1.50236e+07 1.18959e+07 0.00411381 1.5097e+07 50.1218 0.00323299 0.994628 0 50.0833 GTEX-145MH-2326-SM-5O9AW 1 C1 2 pieces; spermatogenesis is present 6.9 Testis Testis 0000473 1320 1329 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.986965 306747 0.931245 0.990722 0.725442 33448 1 76 0.00233925 217 0 9.29367e+07 0.0684509 821255 9.3807e+07 1.36691e+07 33522 4.61919e+07 0 0.205802 0.990722 0.718712 9.29367e+07 0.0036909 1.95017e+07 1.46696e+07 1.94957e+07 222 1.95942e+07 1.47126e+07 0.00301251 1.97194e+07 50.1593 0.00875473 0.99448 0 49.9923 GTEX-145MH-2726-SM-5QGQ6 2 C1 6 pieces; muscularsis with minimal residual attached autolyzed mucosa 6.7 Colon Colon - Sigmoid 0001159 1372 1280 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991751 167973 0.965076 0.993044 0.802116 22122 1 76 0.00204412 127 0 5.56833e+07 0.0347429 696550 5.60733e+07 3.96584e+06 22139 2.77138e+07 0 0.16296 0.993044 0.796536 5.56833e+07 0.00312629 1.1879e+07 5.60847e+06 1.20057e+07 151 1.19108e+07 7.06635e+06 0.0025845 1.20461e+07 50.2824 0.0124221 0.994337 0 50.2653 GTEX-145MH-2826-SM-5RQJF 2 C1 6 pieces 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1374 1279 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992135 177919 0.974378 0.992958 0.816181 21910 1 76 0.0021966 161 0 6.275e+07 0.0253563 194523 6.31951e+07 3.02417e+06 21934 3.12564e+07 0 0.158197 0.992958 0.810433 6.275e+07 0.00294535 1.36775e+07 7.24423e+06 1.37708e+07 148 1.37463e+07 1.14596e+07 0.00257066 1.37562e+07 50.018 0.00307814 0.993782 0 50.1699 GTEX-145MH-2926-SM-5Q5D2 2 C1 4 pieces; Purkinje cells are well visualized, mild to moderate autolysis 7.7 Brain Brain - Cerebellum 0002037 1377 1276 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.986395 269920 0.951884 0.988644 0.755848 23662 1 76 0.0023354 201 0 8.6139e+07 0.047658 945515 8.71285e+07 1.13869e+07 23685 4.28456e+07 0 0.196036 0.988644 0.747264 8.6139e+07 0.00373643 1.86521e+07 1.27296e+07 1.8807e+07 233 1.87957e+07 1.16455e+07 0.00303432 1.88458e+07 50.0665 0.010852 0.990892 0 50.2067 GTEX-145MH-3026-SM-5Q5DZ 1 C1 4 pieces 6.8 Brain Brain - Cortex 0001870 1380 1274 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991327 311949 0.965346 0.994019 0.834839 23806 1 76 0.00233011 268 0 8.82017e+07 0.0342623 2.41348e+06 8.87325e+07 1.28894e+07 23825 4.38833e+07 0 0.130507 0.994019 0.829846 8.82017e+07 0.00373512 1.9313e+07 1.6463e+07 1.94086e+07 293 1.93683e+07 1.06524e+07 0.00303071 1.95645e+07 50.2519 0.0271995 0.996711 0 50.1235 GTEX-145MH-3126-SM-5S2QT 2 C1 1 piece; adenohypophysis and neurohypophysis with significant attached dura 6 Pituitary Pituitary 0000007 1381 1273 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991113 199940 0.961312 0.992188 0.774124 24805 1 76 0.001897 131 0 6.22497e+07 0.0384162 163496 6.27398e+07 3.31363e+06 24832 3.10001e+07 0 0.187188 0.992188 0.768077 6.22497e+07 0.00263129 1.35552e+07 9.1186e+06 1.3691e+07 143 1.36569e+07 1.02437e+07 0.00226375 1.36578e+07 50.0017 0.00260594 0.993263 0 50.2493 GTEX-145MI-0001-SM-5DU4V B1 Blood Whole Blood 0013756 671 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MI-0001-SM-7DRO7 B1 Blood Whole Blood 0013756 671 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MI-0011-R10a-SM-5PNZD B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.988384 1.39412e+06 0.940557 0.989056 0.814162 24015 1 76 0.00322669 372 0 9.62844e+07 0.0591105 1.58134e+07 9.73498e+07 3.2788e+06 24034 4.78995e+07 0 0.126394 0.989056 0.805252 9.62844e+07 0.00378815 2.05967e+07 5.13444e+07 2.11348e+07 350 2.08968e+07 1.14666e+07 0.00350723 2.09175e+07 50.0247 0.162439 0.989729 0 50.6447 GTEX-145MI-0011-R11a-SM-5P9JZ B1, A1 7 Brain Brain - Cerebellar Hemisphere 0002037 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.989179 956077 0.903444 0.989811 0.621646 26947 1 76 0.00379919 268 0 1.09998e+08 0.0961945 5.79220e+06 1.1113e+08 3.73827e+06 27029 5.47183e+07 0 0.281798 0.989811 0.615312 1.09998e+08 0.00402117 2.27888e+07 3.69253e+07 2.29754e+07 266 2.28516e+07 8.75019e+06 0.00391011 2.29816e+07 50.1418 0.0521211 0.990444 0 50.2039 GTEX-145MI-0011-R3b-SM-5PNWK B1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 EXCLUDE 0.991701 1.11146e+06 0.933027 0.993577 0.810439 21975 1 76 0.00210637 184 0 6.4282e+07 0.0667565 1.1681e+07 6.46975e+07 5.75100e+06 21985 3.20097e+07 0 0.122588 0.993577 0.805234 6.4282e+07 0.00333968 1.3774e+07 3.90622e+07 1.39443e+07 204 1.3767e+07 5.39107e+06 0.00272186 1.40979e+07 50.5936 0.180548 0.995454 0 50.3072 GTEX-145MI-0011-R4b-SM-5PNZH B1, A1 5.7 Brain Brain - Amygdala 0001876 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.989543 1.48792e+06 0.939155 0.990679 0.813383 23298 1 76 0.00316044 371 0 1.01881e+08 0.0606347 1.71603e+07 1.02839e+08 3.08372e+06 23320 5.07154e+07 0 0.125773 0.990679 0.805801 1.01881e+08 0.00377277 2.18883e+07 5.31358e+07 2.24499e+07 380 2.20879e+07 8.78366e+06 0.00346625 2.23664e+07 50.3132 0.166865 0.991815 0 50.6334 GTEX-145MI-0011-R5a-SM-5Q5B4 B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 670 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.988095 866061 0.950458 0.990925 0.810941 18978 1 76 0.00177166 189 0 6.00086e+07 0.0494348 8.15514e+06 6.05582e+07 4.49959e+06 18984 2.98583e+07 0 0.139517 0.990925 0.803582 6.00086e+07 0.00306071 1.266e+07 4.86286e+07 1.2677e+07 213 1.23562e+07 3.01651e+06 0.00241434 1.31227e+07 51.5042 0.134666 0.993754 0 50.0334 GTEX-145MI-0011-R6a-SM-5PNZA B1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990633 842001 0.953334 0.99136 0.838734 22187 1 76 0.00303094 266 0 8.95417e+07 0.046475 1.72531e+07 9.03221e+07 2.48824e+06 22201 4.46232e+07 0 0.1146 0.99136 0.831487 8.95417e+07 0.00340158 1.93539e+07 3.9648e+07 1.99669e+07 325 1.97234e+07 7.29788e+06 0.00321612 1.96635e+07 49.9239 0.191017 0.992086 0 50.7795 GTEX-145MI-0011-R7b-SM-5Q5AZ B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 670 BP-48345 RNA isolation_PAXgene Tissue miRNA 01/14/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.982785 286929 0.979841 0.985741 0.827495 17639 1 76 0.00171573 368 0 7.73013e+07 0.0201091 9.59469e+06 7.84196e+07 6.28029e+06 17641 3.84774e+07 0 0.152346 0.985741 0.815696 7.73013e+07 0.00284135 1.64184e+07 5.87041e+07 1.66373e+07 339 1.62964e+07 3.28823e+06 0.00227685 1.68703e+07 50.8652 0.122351 0.988696 0 50.3312 GTEX-145MI-0011-R8b-SM-5PNZ9 B1, A1 6.1 Brain Brain - Hypothalamus 0001898 670 BP-48069 RNA isolation_PAXgene Tissue miRNA 01/08/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.990359 855182 0.94947 0.991122 0.824996 23058 1 76 0.00318813 373 0 9.29632e+07 0.050376 1.7908e+07 9.3796e+07 2.77342e+06 23069 4.62709e+07 0 0.124474 0.991122 0.817672 9.29632e+07 0.00374879 2.02336e+07 3.3027e+07 2.08024e+07 363 2.04401e+07 7.66552e+06 0.00346824 2.06506e+07 50.2562 0.190925 0.991884 0 50.693 GTEX-145MI-0326-SM-5Q5EV 0 B1 2 pieces; 10% external fat on 1 7.1 Muscle Muscle - Skeletal 0011907 696 899 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.9898 181561 0.983288 0.992625 0.878948 19321 1 76 0.00185795 195 0 7.65623e+07 0.0165368 1.53263e+06 7.71311e+07 1.07122e+07 19331 3.80923e+07 0 0.10434 0.992625 0.872466 7.65623e+07 0.00345617 1.6778e+07 8.99595e+06 1.67514e+07 212 1.66396e+07 1.38566e+07 0.00265479 1.7088e+07 50.6647 0.0198705 0.99545 0 49.9603 GTEX-145MI-0426-SM-5O99V 1 B1 2 pieces; 50 & 40% fibrous tissue content 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 699 896 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989867 216643 0.97983 0.992797 0.853686 22055 1 76 0.00207065 211 0 8.43052e+07 0.0198278 195496 8.49168e+07 1.05598e+07 22066 4.19342e+07 0 0.126144 0.992797 0.847537 8.43052e+07 0.00355903 1.85874e+07 7.71083e+06 1.87654e+07 218 1.87865e+07 1.76254e+07 0.00281264 1.88064e+07 50.0264 0.00230221 0.995728 0 50.2382 GTEX-145MI-0526-SM-5O9A8 0 B1 4 pieces; well trimmed; up to 10% intradermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 702 893 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.989436 242229 0.973553 0.992868 0.805729 22919 1 76 0.00213837 209 0 7.62745e+07 0.0261579 350216 7.68224e+07 9.00034e+06 22944 3.79173e+07 0 0.167823 0.992868 0.799983 7.62745e+07 0.00371754 1.65558e+07 8.54873e+06 1.66912e+07 182 1.67298e+07 1.35405e+07 0.00292523 1.67682e+07 50.0573 0.00455878 0.996301 0 50.2036 GTEX-145MI-0626-SM-5SI8S 0 B1 6 pieces; well trimmed; 1 piece has 10% dermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 707 888 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989709 196455 0.975796 0.992758 0.733368 23950 1 76 0.0020624 219 0 9.01971e+07 0.0239282 389981 9.08551e+07 9.25452e+06 23986 4.48529e+07 0 0.242428 0.992758 0.728057 9.01971e+07 0.0033063 1.97729e+07 9.61127e+06 1.99044e+07 216 1.99422e+07 1.4045e+07 0.00268244 1.99996e+07 50.0718 0.00429234 0.995807 0 50.1657 GTEX-145MI-0826-SM-5SI95 0 B1 2 pieces 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 718 877 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989021 267791 0.971458 0.992166 0.793028 23315 1 76 0.0020246 205 0 8.27234e+07 0.0282556 516067 8.33767e+07 8.5017e+06 23338 4.1108e+07 0 0.178431 0.992166 0.786815 8.27234e+07 0.00323646 1.80748e+07 1.2514e+07 1.8242e+07 214 1.823e+07 1.32926e+07 0.00262861 1.83446e+07 50.1567 0.00618959 0.995309 0 50.2302 GTEX-145MI-1126-SM-5O9AK 1 B1 2 pieces 6.3 Thyroid Thyroid 0002046 747 848 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.985757 256334 0.959999 0.99047 0.735123 23837 1 76 0.00221282 159 0 8.1481e+07 0.0397917 1.61271e+06 8.2265e+07 1.06404e+07 23873 4.04305e+07 0 0.224875 0.99047 0.728118 8.1481e+07 0.00385935 1.76837e+07 8.81519e+06 1.78734e+07 180 1.79399e+07 1.19281e+07 0.00303217 1.79836e+07 50.0609 0.0196038 0.995183 0 50.2667 GTEX-145MI-2626-SM-5QGQ8 1 B1 2 pieces; atrophic with corpora albicantia and a few small cysts 6 Ovary Ovary 0000992 789 806 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954,LCSET-5337 04/10/2014 TruSeq.v1 RNASEQ 0.992375 539897 0.950784 0.993655 0.70903 22017 1 76 0.00186378 147 0 7.17058e+07 0.0489827 483943 7.21636e+07 4.29216e+06 22044 3.56877e+07 0 0.241754 0.993655 0.704531 7.17058e+07 0.00273972 1.55042e+07 2.39801e+07 1.57716e+07 155 1.57108e+07 1.11668e+07 0.00230118 1.56771e+07 49.9463 0.00670619 0.994936 0 50.4276 GTEX-145MI-3126-SM-5Q5CF 1 B1 2 pieces 6 Brain Brain - Cerebellum 0002037 852 743 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.986545 977296 0.885306 0.988803 0.597328 25065 1 76 0.00238402 118 0 6.90157e+07 0.114364 3.45573e+06 6.97973e+07 5.27408e+06 25110 3.4293e+07 0 0.287977 0.988803 0.59064 6.90157e+07 0.00351913 1.39702e+07 4.18251e+07 1.41922e+07 142 1.41647e+07 5.4848e+06 0.00295028 1.41541e+07 49.9812 0.049511 0.991061 0 50.394 GTEX-145MN-0001-SM-5GYC2 B1 Blood Whole Blood 0013756 -75 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MN-0001-SM-7DROT B1 Blood Whole Blood 0013756 -75 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MN-0126-SM-5RQHY 1 B1 2 pieces; moderate congestion 7.6 Spleen Spleen 0002106 105 752 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990489 156329 0.965956 0.991575 0.805311 22973 1 76 0.00325077 127 0 6.23208e+07 0.0311644 303731 6.28503e+07 2.94067e+06 22998 3.09396e+07 0 0.160645 0.991575 0.798526 6.23208e+07 0.00411276 1.37322e+07 9.89265e+06 1.38771e+07 143 1.38659e+07 9.93026e+06 0.00368129 1.38111e+07 49.9009 0.00483261 0.992661 0 50.2623 GTEX-145MN-0226-SM-5QGPY 1 B1 2 pieces; 40% external fat 8.6 Adrenal Gland Adrenal Gland 0002369 109 748 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993714 255733 0.973372 0.994914 0.813 22160 1 76 0.00221997 126 0 5.98247e+07 0.0262452 618285 6.01306e+07 4.22805e+06 22178 2.98034e+07 0 0.160372 0.994914 0.808865 5.98247e+07 0.0030956 1.31797e+07 6.59746e+06 1.33217e+07 140 1.32728e+07 1.04992e+07 0.00265726 1.32987e+07 50.0487 0.0102824 0.996113 0 50.268 GTEX-145MN-0326-SM-5QGQI 1 B1 6 pieces; no lesions; medulla in 2 small fragments [annotated] 7.5 Kidney Kidney - Cortex 0001225 112 745 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994179 140555 0.973987 0.995211 0.842185 22264 1 76 0.00226181 115 0 5.56724e+07 0.0257119 1.58182e+06 5.59403e+07 3.73136e+06 22279 2.77503e+07 0 0.131802 0.995211 0.838152 5.56724e+07 0.0031183 1.22919e+07 6.18528e+06 1.23603e+07 136 1.23312e+07 9.66398e+06 0.00268961 1.23764e+07 50.0916 0.0282769 0.996243 0 50.1388 GTEX-145MN-0626-SM-5QGRH 1 B1 2 pieces; enlarged nuclei; few small patchy fibrous foci 9.1 Heart Heart - Left Ventricle 0006566 129 728 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99493 198515 0.983847 0.995769 0.873518 20840 1 76 0.00214241 199 0 8.26249e+07 0.0158147 1.0415e+06 8.29759e+07 5.25778e+06 20848 4.12041e+07 0 0.110329 0.995769 0.869822 8.26249e+07 0.00284515 1.8078e+07 1.2649e+07 1.81821e+07 234 1.8093e+07 1.69188e+07 0.00249348 1.82277e+07 50.1854 0.0125519 0.996608 0 50.1435 GTEX-145MN-0726-SM-5NQBH 1 B1 2 pieces; 40% external fat on 1; muscle resembles ventricular myocardium rather than atrial 8.6 Heart Heart - Atrial Appendage 0006631 130 727 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989414 217778 0.982808 0.992905 0.860144 21600 1 76 0.00284555 268 0 9.44655e+07 0.0169239 1.48582e+06 9.51405e+07 1.42299e+07 21615 4.69814e+07 0 0.122663 0.992905 0.854042 9.44655e+07 0.00564371 2.06471e+07 1.7487e+07 2.06085e+07 259 2.06148e+07 1.67932e+07 0.00423971 2.09174e+07 50.3643 0.0156171 0.996397 0 49.9532 GTEX-145MN-0926-SM-5NQBT 1 B1 2 pieces; fibrosis, emphysema, pigmented macrophages 7.7 Lung Lung 0008952 146 711 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988538 149300 0.966912 0.991149 0.771907 25201 1 76 0.00276619 163 0 7.93733e+07 0.0326427 253771 8.00821e+07 1.09102e+07 25229 3.94921e+07 0 0.195005 0.991149 0.765075 7.93733e+07 0.00533653 1.74249e+07 7.93629e+06 1.7486e+07 179 1.74833e+07 1.28243e+07 0.00404798 1.76202e+07 50.195 0.00316889 0.99376 0 50.0875 GTEX-145MN-1026-SM-5NQ9G 1 B1 6 pieces; prominent submucosal mucous glands in 4 pieces up to 10% area [annotated] 9.3 Esophagus Esophagus - Mucosa 0006920 152 705 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.985653 246904 0.974324 0.988465 0.811035 23890 1 76 0.00272075 280 0 9.58596e+07 0.025242 363556 9.69782e+07 1.27958e+07 23915 4.76834e+07 0 0.163289 0.988465 0.80168 9.58596e+07 0.00539585 2.15155e+07 1.53513e+07 2.15973e+07 258 2.16257e+07 1.82029e+07 0.0040545 2.1749e+07 50.1421 0.00374884 0.991276 0 50.0949 GTEX-145MN-1126-SM-5RQJB 1 B1 6 pieces; well trimmed except for submucosal glands in 1 piece (5%) [annotated] 7.3 Esophagus Esophagus - Muscularis 0004648 156 701 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992555 160065 0.97428 0.99352 0.843994 21588 1 76 0.00226723 154 0 6.85545e+07 0.025481 416480 6.90017e+07 3.21747e+06 21606 3.41353e+07 0 0.130285 0.99352 0.838525 6.85545e+07 0.00311686 1.47476e+07 5.73591e+06 1.48617e+07 167 1.47751e+07 1.17123e+07 0.00269163 1.49006e+07 50.2115 0.0060358 0.994484 0 50.1927 GTEX-145MN-1326-SM-5NQ9S 1 B1 6 pieces; 4 have full thickness wall, 2 are without muscularis 7 Stomach Stomach 0000945 176 681 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.984593 189180 0.976317 0.987516 0.819876 23156 1 76 0.00260055 314 0 8.38251e+07 0.0231189 527577 8.48847e+07 1.15377e+07 23183 4.1683e+07 0 0.156442 0.987516 0.809641 8.38251e+07 0.00557027 1.89818e+07 7.46805e+07 1.93485e+07 230 1.93303e+07 2.01232e+07 0.00408101 1.92406e+07 49.8837 0.00621522 0.99044 0 50.4783 GTEX-145MN-1426-SM-5SI9H 1 B1 2 pieces; multiple foci of fibrosis (probable healed pancreatitis); 30% external fat on 1, 20% on other 7.8 Pancreas Pancreas 0001150 182 675 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.99249 197498 0.976328 0.994486 0.856316 21700 1 76 0.00216825 117 0 7.83413e+07 0.0234753 114533 7.87756e+07 8.13022e+06 21714 3.90234e+07 0 0.120012 0.994486 0.851594 7.83413e+07 0.00317369 1.79108e+07 2.09512e+07 1.80626e+07 131 1.80056e+07 2.32046e+07 0.00266996 1.81261e+07 50.1667 0.00145391 0.996483 0 50.2109 GTEX-145MN-1526-SM-5SI9T 1 B1 6 pieces; 3 have deep pockets of fat up to 1.3mm across 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 224 633 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991222 192885 0.970525 0.993461 0.792621 24087 1 76 0.00221817 187 0 7.76743e+07 0.0292558 315257 7.81855e+07 7.60288e+06 24112 3.86638e+07 0 0.177904 0.993461 0.787439 7.76743e+07 0.00344057 1.70209e+07 8.94908e+06 1.70759e+07 182 1.70384e+07 1.32499e+07 0.002828 1.72265e+07 50.2744 0.00403217 0.995701 0 50.0806 GTEX-145MN-1726-SM-5SIA6 1 B1 6 pieces; 2 lack muscularis LCM 7.8 Colon Colon - Transverse 0001157 186 671 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.98871 227129 0.971761 0.991476 0.812927 23603 1 76 0.00292916 217 0 8.61606e+07 0.0260598 759787 8.69013e+07 9.02821e+06 23627 4.27855e+07 0 0.158834 0.991476 0.805998 8.61606e+07 0.00395053 1.91442e+07 1.43156e+07 1.91328e+07 243 1.91603e+07 1.36207e+07 0.00343842 1.93399e+07 50.2332 0.0087431 0.994242 0 49.985 GTEX-145MN-1926-SM-5SIAI 1 B1 2 pieces; fibrofatty tissue without mammary ducts 6.1 Breast Breast - Mammary Tissue 0008367 217 640 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992092 143760 0.972438 0.993975 0.803339 23175 1 76 0.00218767 162 0 7.31201e+07 0.0273009 202799 7.35633e+07 6.96924e+06 23202 3.64132e+07 0 0.169099 0.993975 0.798499 7.31201e+07 0.00321655 1.59655e+07 7.59569e+06 1.60727e+07 176 1.60312e+07 1.20286e+07 0.00270113 1.61378e+07 50.1657 0.00275679 0.995858 0 50.1673 GTEX-145MN-2226-SM-5SIAU 1 B1 6 pieces; well dissected; 5% dermal fat 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 237 620 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990085 181612 0.972926 0.992633 0.819791 22671 1 76 0.00227246 196 0 7.40368e+07 0.0268441 266217 7.45862e+07 7.13706e+06 22690 3.68311e+07 0 0.153135 0.992633 0.813752 7.40368e+07 0.00357964 1.60849e+07 8.57713e+06 1.61308e+07 185 1.60956e+07 1.22131e+07 0.00292437 1.62976e+07 50.3118 0.00356925 0.995182 0 50.0711 GTEX-145MN-2326-SM-5SIB7 0 B1 1 piece; well trimmed 8.1 Blood Vessel Artery - Tibial 0007610 247 610 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992575 147457 0.976588 0.994285 0.855922 21975 1 76 0.00199239 208 0 8.16489e+07 0.0229719 241222 8.21183e+07 7.58314e+06 21990 4.06643e+07 0 0.120666 0.994285 0.851031 8.16489e+07 0.00296805 1.74531e+07 6.41859e+06 1.76127e+07 225 1.75599e+07 1.63299e+07 0.00247938 1.76382e+07 50.1112 0.00293749 0.995994 0 50.2275 GTEX-145MN-2426-SM-5NQA5 1 B1 2 pieces; 1 has 10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 257 600 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990845 250351 0.98144 0.993597 0.868554 20634 1 76 0.00255199 166 0 8.01434e+07 0.0182946 605663 8.06598e+07 1.03612e+07 20644 3.98785e+07 0 0.112886 0.993597 0.862993 8.01434e+07 0.00527693 1.73744e+07 1.02905e+07 1.7466e+07 187 1.74607e+07 1.66048e+07 0.00391068 1.75771e+07 50.1661 0.00750886 0.99635 0 50.1314 GTEX-145MN-2626-SM-5NQAH 1 B1 2 pieces; 1mm smooth muscle carry-over [annotated] 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 262 595 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989777 225631 0.976503 0.992896 0.822453 23399 1 76 0.00256218 212 0 8.82849e+07 0.0231621 232208 8.89165e+07 1.19029e+07 23423 4.39085e+07 0 0.154051 0.992896 0.81661 8.82849e+07 0.00534078 1.94033e+07 8.34192e+06 1.95317e+07 221 1.95485e+07 1.67147e+07 0.00394711 1.96492e+07 50.1284 0.00261153 0.996015 0 50.1649 GTEX-145MN-5001-SM-AN41L B1 Heart Heart - Left Ventricle 0006566 257 ChIP-Seq GTEX-145MN-5004-SM-AN41N B1 Lung Lung 0008952 257 ChIP-Seq GTEX-145MN-5019-SM-AN41O B1 Muscle Muscle - Skeletal 0011907 257 ChIP-Seq GTEX-145MO-0001-SM-5GY9Z C1 Blood Whole Blood 0013756 488 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-145MO-0001-SM-5HJRJ C1 Blood Whole Blood 0013756 488 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 GTEx_OM25_Jan14_01 02/13/2014 Illumina OMNI SNP Array OMNI GTEX-145MO-0001-SM-7DROL C1 Blood Whole Blood 0013756 488 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-145MO-0126-SM-5S2QU 1 C1 2 pieces, spermatogenesis present 5.8 Testis Testis 0000473 495 674 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99147 234297 0.926881 0.992715 0.716564 31607 1 76 0.00181066 134 0 6.27204e+07 0.0727633 335222 6.31806e+07 3.88411e+06 31651 3.12389e+07 0 0.210317 0.992715 0.711343 6.27204e+07 0.00244436 1.30119e+07 1.04226e+07 1.31384e+07 126 1.31414e+07 1.0843e+07 0.00212712 1.30845e+07 49.8915 0.00530577 0.993959 0 50.2419 GTEX-145MO-0326-SM-5Q5B3 0 C1 6 pieces, no significant dermal fat; squamous epithelium is ~40-50 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 658 512 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988894 161190 0.979765 0.990982 0.866083 21796 1 76 0.0018294 184 0 6.65184e+07 0.0199892 303251 6.71237e+07 5.14448e+06 21810 3.30876e+07 0 0.113682 0.990982 0.858273 6.65184e+07 0.00298817 1.45304e+07 6.80247e+06 1.45958e+07 172 1.45614e+07 1.31025e+07 0.00240757 1.47038e+07 50.2433 0.00451779 0.993071 0 50.1123 GTEX-145MO-0426-SM-5QGP6 0 C1 2 pieces, ~5-10% fascia/vascular tissue, rep. delineated 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 661 510 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992731 156750 0.977262 0.993884 0.80336 21340 1 76 0.00187552 145 0 6.14323e+07 0.0224473 347606 6.18103e+07 3.98256e+06 21358 3.05835e+07 0 0.173902 0.993884 0.798447 6.14323e+07 0.00295282 1.35269e+07 6.41543e+06 1.35956e+07 157 1.35155e+07 9.84426e+06 0.00241355 1.36807e+07 50.3038 0.00562376 0.995037 0 50.1267 GTEX-145MO-0526-SM-5Q5F7 0 C1 2 pieces, excellent clean specimens 7.7 Nerve Nerve - Tibial 0001323 662 509 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990893 162234 0.969354 0.993424 0.780173 23568 1 76 0.00206428 179 0 7.15549e+07 0.0303502 257735 7.20286e+07 9.94478e+06 23593 3.55943e+07 0 0.189181 0.993424 0.775042 7.15549e+07 0.00347803 1.56967e+07 6.84391e+06 1.57844e+07 167 1.57663e+07 1.20162e+07 0.00276935 1.58885e+07 50.193 0.00357823 0.995955 0 50.1393 GTEX-145MO-0626-SM-5NQAW 0 C1 2 pieces, prominent Monckeberg medical sclerosis, delineated 7.4 Blood Vessel Artery - Tibial 0007610 664 508 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.980882 234009 0.975172 0.983957 0.851057 20989 1 76 0.00219433 152 0 6.94601e+07 0.0244876 281660 7.05926e+07 8.7277e+06 21006 3.45003e+07 0 0.124115 0.983957 0.837404 6.94601e+07 0.00526426 1.48118e+07 6.18794e+06 1.4977e+07 167 1.49092e+07 1.35438e+07 0.0037245 1.50887e+07 50.2992 0.00398993 0.987031 0 50.2772 GTEX-145MO-0726-SM-5NQB9 0 C1 2 pieces, minimal (~5%) interstitial fat, delineated 9 Muscle Muscle - Skeletal 0011907 666 507 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990027 208938 0.98661 0.99329 0.887564 19705 1 76 0.00212234 275 0 8.98139e+07 0.0130745 618608 9.04206e+07 1.22445e+07 19713 4.46819e+07 0 0.099046 0.99329 0.881608 8.98139e+07 0.00484302 1.97134e+07 1.09116e+07 1.9743e+07 261 1.97698e+07 1.99814e+07 0.00347821 1.99443e+07 50.2198 0.00684145 0.996553 0 50.0375 GTEX-145MO-0826-SM-5NQBL 0 C1 2 pieces, fibroadipose stroma only, no ductal elements noted 6.2 Breast Breast - Mammary Tissue 0008367 667 506 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989612 189837 0.977066 0.992664 0.818388 23197 1 76 0.00234317 206 0 7.86286e+07 0.0225943 597811 7.92097e+07 1.03806e+07 23224 3.91046e+07 0 0.158678 0.992664 0.812384 7.86286e+07 0.00507108 1.73142e+07 1.0835e+07 1.73618e+07 214 1.73757e+07 1.20513e+07 0.00370294 1.75218e+07 50.2094 0.0075472 0.995715 0 50.0687 GTEX-145MO-1126-SM-5NQBX 1 C1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis 7 Heart Heart - Left Ventricle 0006566 677 498 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989008 188416 0.984836 0.991835 0.839201 20041 1 76 0.0022056 266 0 8.34904e+07 0.0150535 3.43223e+06 8.41777e+07 1.15471e+07 20049 4.15537e+07 0 0.145635 0.991835 0.83235 8.34904e+07 0.00503639 1.84276e+07 3.24123e+07 1.83159e+07 296 1.82501e+07 8.00564e+06 0.00361696 1.86568e+07 50.551 0.0407737 0.994662 0 49.8481 GTEX-145MO-1226-SM-5QGPC 1 C1 6 pieces, up to ~0.2mm atherosis 7 Blood Vessel Artery - Aorta 0001496 678 498 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992604 161069 0.975572 0.993502 0.797759 21262 1 76 0.00195772 134 0 6.48454e+07 0.0240279 217658 6.52695e+07 3.91337e+06 21280 3.22891e+07 0 0.177813 0.993502 0.792575 6.48454e+07 0.00283117 1.38979e+07 4.99044e+06 1.39783e+07 150 1.39144e+07 1.17759e+07 0.00239405 1.40242e+07 50.1966 0.00333476 0.9944 0 50.1442 GTEX-145MO-1326-SM-5Q5EF 1 C1 2 pieces, patchy acute pneumonia/peribronchitis 7.5 Lung Lung 0008952 679 497 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991054 194874 0.975052 0.99332 0.77414 22619 1 76 0.00227203 131 0 6.36433e+07 0.0245669 239878 6.40713e+07 8.29318e+06 22651 3.16541e+07 0 0.200912 0.99332 0.768969 6.36433e+07 0.00366609 1.40424e+07 6.45243e+06 1.41043e+07 145 1.40871e+07 1.06654e+07 0.00296747 1.42006e+07 50.2006 0.00374392 0.995587 0 50.1099 GTEX-145MO-1426-SM-5Q5BS 1 C1 6 pieces, squamous mucosa is ~0.3mm, superficial sloughing. Submucosal mucus glands incidentally present, rep encircled. 7.1 Esophagus Esophagus - Mucosa 0006920 681 496 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.988567 167654 0.97598 0.991468 0.815923 22371 1 76 0.00187019 153 0 6.94411e+07 0.0237888 360063 7.00386e+07 5.28599e+06 22391 3.4534e+07 0 0.160056 0.991468 0.808962 6.94411e+07 0.00285822 1.55677e+07 7.47841e+06 1.56095e+07 167 1.56197e+07 1.22712e+07 0.00236276 1.57585e+07 50.2211 0.00514092 0.99437 0 50.067 GTEX-145MO-1426-SM-DTX9W 1 C1 6 pieces, squamous mucosa is ~0.3mm, superficial sloughing. Submucosal mucus glands incidentally present, rep encircled. 7.8 Esophagus Esophagus - Mucosa 0006920 681 496 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991752 685396 0.97675 0.993527 0.787668 22172 1 76 0.00199544 147 0 7.31416e+07 0.0229993 289288 7.36181e+07 3.25983e+06 22194 3.63825e+07 0 0.189083 0.993527 0.782569 7.31416e+07 0.00236723 1.6531e+07 8.03034e+06 1.64954e+07 165 1.67115e+07 1.34983e+07 0.002181 1.64408e+07 49.5917 0.00392958 0.995302 0 49.9461 GTEX-145MO-1526-SM-5QGQC 1 C1 6 pieces, all target muscularis. 6.5 Esophagus Esophagus - Muscularis 0004648 682 495 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993332 213252 0.972212 0.99473 0.813018 22100 1 76 0.00189712 137 0 6.56702e+07 0.0275691 720296 6.60181e+07 4.70752e+06 22122 3.27072e+07 0 0.159193 0.99473 0.808734 6.56702e+07 0.00281482 1.41227e+07 5.876e+06 1.42781e+07 163 1.4206e+07 1.03695e+07 0.00235532 1.42835e+07 50.1361 0.0109106 0.996128 0 50.2737 GTEX-145MO-2126-SM-5Q5CZ 1 C1 2 pieces, some areas approach autolysis score two. Area of fibrotic remote pancreatitis ensquared. Reasonably well-preserved Islets, rep. delineated 6.5 Pancreas Pancreas 0001150 695 489 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.979994 207114 0.973545 0.982807 0.809461 21933 1 76 0.00224358 119 0 8.19844e+07 0.0262078 210860 8.34187e+07 1.14466e+07 21955 4.07762e+07 0 0.164084 0.982807 0.795543 8.19844e+07 0.00391592 1.87017e+07 2.3512e+07 1.90122e+07 131 1.89977e+07 2.19835e+07 0.00307736 1.89541e+07 49.9424 0.00252773 0.985619 0 50.4116 GTEX-145MO-2226-SM-5Q5BN 3 C1 "2 pieces, embedded ""en face"" sp thickness not evaluable. Autolysis moderately advanced in mucosa" 5.7 Stomach Stomach 0000945 696 489 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989094 137666 0.979315 0.990919 0.836142 22403 1 76 0.00191019 201 0 6.63242e+07 0.0201996 1.15386e+06 6.6932e+07 4.73191e+06 22420 3.29916e+07 0 0.143173 0.990919 0.828549 6.63242e+07 0.00303175 1.49413e+07 2.43196e+07 1.50061e+07 201 1.49409e+07 9.66446e+06 0.00246994 1.51156e+07 50.2905 0.0172392 0.992745 0 50.1082 GTEX-145MO-2326-SM-5NQ9K 1 C1 2 pieces moderate congestion; no significant steatosis or hepatitis noted 6.8 Liver Liver 0001114 698 487 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.99048 295450 0.976743 0.993162 0.862648 20710 1 76 0.00257522 267 0 9.79262e+07 0.0228431 2.60695e+06 9.86005e+07 1.24218e+07 20722 4.87296e+07 0 0.114095 0.993162 0.856749 9.79262e+07 0.00524627 2.12443e+07 2.57999e+07 2.13506e+07 320 2.13193e+07 1.39688e+07 0.00390714 2.15101e+07 50.2227 0.0264396 0.995844 0 50.1247 GTEX-145MO-2426-SM-5NQ9W 3 C1 6 pieces, mucosa is ~0.3 mm, ~20% thickness, glandular component completely autolyzed. 5.7 Colon Colon - Transverse 0001157 699 486 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988046 207285 0.969789 0.99118 0.802649 24927 1 76 0.00257892 279 0 1.0412e+08 0.0294828 997463 1.05047e+08 1.31735e+07 24964 5.17373e+07 0 0.16714 0.99118 0.795569 1.0412e+08 0.00538539 2.25234e+07 1.29918e+07 2.274e+07 316 2.27299e+07 1.54631e+07 0.00397772 2.28337e+07 50.114 0.00949544 0.994314 0 50.2393 GTEX-145MO-2626-SM-5QGPD 1 C1 6 pieces, all target muscularis 6.5 Colon Colon - Sigmoid 0001159 706 482 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992044 399158 0.959248 0.993265 0.803968 22439 1 76 0.00192173 160 0 7.23525e+07 0.040515 491064 7.28431e+07 5.00834e+06 22464 3.60263e+07 0 0.15528 0.993265 0.798553 7.23525e+07 0.00286232 1.53907e+07 1.54665e+07 1.55176e+07 184 1.5429e+07 1.11929e+07 0.00239145 1.55815e+07 50.2458 0.00674139 0.994486 0 50.2053 GTEX-145MO-2826-SM-5LU96 0 C1 6 pieces, squamous epithelium is ~30 microns, trace dermal adherent fat, rep delineated 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 710 483 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990579 254730 0.973052 0.992398 0.761433 23849 1 76 0.00457101 134 0 6.2948e+07 0.0266961 258195 6.34302e+07 5.42552e+06 23875 3.1305e+07 0 0.211619 0.992398 0.755644 6.2948e+07 0.0038098 1.38827e+07 7.91345e+06 1.39783e+07 130 1.3991e+07 1.05169e+07 0.00419111 1.39832e+07 49.9861 0.00407054 0.994217 0 50.1715 GTEX-145MO-3126-SM-5S2RT 1 C1 1 piece adenohypophysis + ~1.5mm fragment of neurohypophysis, encircled, no abnormalities 5.9 Pituitary Pituitary 0000007 716 479 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991964 585947 0.939724 0.992724 0.74351 24181 1 76 0.00188282 133 0 6.28465e+07 0.0601043 479776 6.33071e+07 3.57774e+06 24213 3.12884e+07 0 0.196214 0.992724 0.7381 6.28465e+07 0.00272543 1.34224e+07 2.01643e+07 1.36736e+07 160 1.35879e+07 7.04052e+06 0.00230381 1.35695e+07 49.9663 0.00757855 0.993484 0 50.4635 GTEX-146FH-0002-SM-5DU3S C1 Blood Whole Blood 0013756 296 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-146FH-0002-SM-6WSBB C1 Blood Whole Blood 0013756 296 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-146FH-0126-SM-5QGPP 1 C1 6 pieces; well trimmed; 10% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 396 643 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993398 138445 0.978702 0.994432 0.825297 22526 1 76 0.00183071 156 0 6.64125e+07 0.0210617 309188 6.67844e+07 4.294e+06 22542 3.31014e+07 0 0.153405 0.994432 0.820702 6.64125e+07 0.00269184 1.46823e+07 6.4497e+06 1.47973e+07 160 1.47571e+07 1.27599e+07 0.00226083 1.47925e+07 50.0599 0.00462964 0.995465 0 50.1949 GTEX-146FH-0226-SM-5QGPQ 0 C1 2 pieces; 5% fibrous content 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 399 640 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993609 143899 0.977346 0.994512 0.808371 22034 1 76 0.00185286 162 0 6.94001e+07 0.0223358 269742 6.97831e+07 4.95529e+06 22058 3.45934e+07 0 0.168976 0.994512 0.803934 6.94001e+07 0.00256284 1.52799e+07 6.44902e+06 1.54198e+07 167 1.53803e+07 1.25936e+07 0.00220753 1.5384e+07 50.0061 0.00386544 0.995415 0 50.2279 GTEX-146FH-0326-SM-5QGPT 1 C1 2 pieces; 5% external fat on 1, none on other 7 Nerve Nerve - Tibial 0001323 422 617 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992788 156273 0.967902 0.993999 0.746358 22059 1 76 0.00187653 131 0 5.25302e+07 0.0318852 167213 5.28474e+07 3.50286e+06 22083 2.61626e+07 0 0.221544 0.993999 0.741879 5.25302e+07 0.00290029 1.1535e+07 4.84563e+06 1.16227e+07 127 1.15774e+07 8.06006e+06 0.00238779 1.16466e+07 50.1491 0.00316407 0.99521 0 50.1894 GTEX-146FH-0426-SM-5QGPS 1 C1 2 pieces; no plaques; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 423 617 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993692 141454 0.976841 0.994696 0.841833 19996 1 76 0.00172828 141 0 6.32129e+07 0.022809 204093 6.355e+07 4.31492e+06 20007 3.14988e+07 0 0.135008 0.994696 0.837368 6.32129e+07 0.00267864 1.35828e+07 4.92379e+06 1.37225e+07 150 1.36652e+07 1.28612e+07 0.00220298 1.37057e+07 50.074 0.00321153 0.9957 0 50.2558 GTEX-146FH-0526-SM-5QGQ3 1 C1 2 pieces; 5% internal fat 8.6 Muscle Muscle - Skeletal 0011907 426 614 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994145 194545 0.984536 0.995 0.883075 18303 1 76 0.00158596 167 0 6.60006e+07 0.0152517 566106 6.63322e+07 4.73157e+06 18308 3.29142e+07 0 0.101461 0.995 0.87866 6.60006e+07 0.00235094 1.44531e+07 9.72685e+06 1.44565e+07 170 1.43912e+07 1.37278e+07 0.00196812 1.45744e+07 50.3162 0.00853441 0.995856 0 50.0059 GTEX-146FH-0826-SM-5SI8T 0 C1 2 pieces; 90% fat with focal ductal-lobular focus on 1; all fat on other piece 6.9 Breast Breast - Mammary Tissue 0008367 461 581 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991822 174868 0.973946 0.993879 0.782901 23918 1 76 0.00192644 144 0 7.04368e+07 0.0255548 220307 7.08706e+07 6.87567e+06 23943 3.50447e+07 0 0.191045 0.993879 0.778109 7.04368e+07 0.00315913 1.55033e+07 7.07404e+06 1.56043e+07 162 1.55767e+07 1.21851e+07 0.00254151 1.56733e+07 50.1547 0.00310858 0.995936 0 50.1623 GTEX-146FH-0926-SM-5SI96 1 C1 2 pieces; non-occlusive sclerotic plaque on 1; 30% & 10% external fat 7.2 Blood Vessel Artery - Coronary 0001621 464 578 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991653 220232 0.970326 0.9938 0.790369 24389 1 76 0.00190532 210 0 8.70888e+07 0.0294033 363466 8.76321e+07 8.3992e+06 24426 4.33479e+07 0 0.179957 0.9938 0.785469 8.70888e+07 0.0029972 1.88875e+07 8.51676e+06 1.90576e+07 229 1.90181e+07 1.5132e+07 0.00245008 1.9107e+07 50.1166 0.00414764 0.995948 0 50.2242 GTEX-146FH-1026-SM-5RQIF 1 C1 2 pieces; mild patchy fibrosis 7.6 Heart Heart - Left Ventricle 0006566 465 577 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993761 194720 0.97933 0.99468 0.856088 21209 1 76 0.00188038 153 0 7.20226e+07 0.0204529 3.04786e+06 7.24078e+07 3.74076e+06 21219 3.58905e+07 0 0.123243 0.99468 0.851534 7.20226e+07 0.00263564 1.59882e+07 6.82382e+06 1.61818e+07 193 1.61238e+07 1.24098e+07 0.00225766 1.61031e+07 49.9679 0.0420929 0.995599 0 50.301 GTEX-146FH-1126-SM-5NQAT 1 C1 2 pieces; 50% fibrous content 8 Heart Heart - Atrial Appendage 0006631 466 577 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990372 208595 0.975723 0.993505 0.833721 21994 1 76 0.00220713 132 0 6.40731e+07 0.0240667 1.65193e+06 6.4492e+07 8.68516e+06 22010 3.18449e+07 0 0.142002 0.993505 0.828306 6.40731e+07 0.00508408 1.3792e+07 6.54664e+06 1.3803e+07 155 1.37733e+07 1.06954e+07 0.00364107 1.3999e+07 50.4063 0.0256145 0.996638 0 50.02 GTEX-146FH-1226-SM-5NQB6 1 C1 2 pieces; patchy emphysema; pleura sampled [annotated] 8.1 Lung Lung 0008952 468 575 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988863 227553 0.974495 0.991747 0.789338 24282 1 76 0.00250317 165 0 8.16539e+07 0.0250986 176701 8.23334e+07 1.08985e+07 24307 4.06035e+07 0 0.185157 0.991747 0.782824 8.16539e+07 0.0053501 1.80249e+07 7.54835e+06 1.81917e+07 182 1.82189e+07 1.44586e+07 0.0039225 1.82254e+07 50.009 0.00214616 0.994631 0 50.2302 GTEX-146FH-1326-SM-5NQBI 1 C1 6 pieces; well trimmed; no plaques 6.7 Blood Vessel Artery - Aorta 0001496 469 575 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990303 199364 0.977502 0.992715 0.842235 22528 1 76 0.00219511 171 0 8.29348e+07 0.0221165 195696 8.35435e+07 9.60568e+06 22548 4.12674e+07 0 0.135267 0.992715 0.836099 8.29348e+07 0.00470786 1.80328e+07 7.24543e+06 1.82044e+07 193 1.81841e+07 1.72908e+07 0.00344843 1.82441e+07 50.0824 0.00234244 0.995127 0 50.2368 GTEX-146FH-1526-SM-5NQBU 1 C1 2 pieces; 80% macrovesicular steatosis, portal inflammation and bridging fibrosis consistent with nonalcoholic steatohepatitis 8.3 Liver Liver 0001114 471 574 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990594 203538 0.976762 0.993316 0.831727 22320 1 76 0.00234289 197 0 8.61531e+07 0.0221945 842270 8.67328e+07 1.2295e+07 22349 4.28458e+07 0 0.145034 0.993316 0.826168 8.61531e+07 0.00488364 1.88095e+07 1.43597e+07 1.87755e+07 232 1.88086e+07 1.73745e+07 0.00360978 1.89935e+07 50.2446 0.00971109 0.996038 0 49.9547 GTEX-146FH-1626-SM-5NQ9H 1 C1 6 pieces; well dissected 8.3 Esophagus Esophagus - Muscularis 0004648 473 572 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988166 242476 0.971726 0.991954 0.817237 23711 1 76 0.00229756 277 0 9.13285e+07 0.0280377 895131 9.20693e+07 1.31971e+07 23734 4.53881e+07 0 0.154489 0.991954 0.810661 9.13285e+07 0.00521887 1.97578e+07 9.87537e+06 1.99034e+07 260 1.99277e+07 1.59419e+07 0.00375264 2.00593e+07 50.1646 0.00972236 0.995741 0 50.1835 GTEX-146FH-1726-SM-5QGQ2 1 C1 6 pieces; well dissected 8.8 Esophagus Esophagus - Mucosa 0006920 474 575 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992185 177356 0.974872 0.993221 0.820416 22443 1 76 0.00195492 128 0 6.06937e+07 0.0247872 144974 6.1108e+07 4.25589e+06 22454 3.02485e+07 0 0.154456 0.993221 0.814854 6.06937e+07 0.00286711 1.36185e+07 8.12528e+06 1.37151e+07 135 1.36921e+07 1.28058e+07 0.00241054 1.37079e+07 50.0288 0.00237242 0.994256 0 50.1767 GTEX-146FH-1826-SM-5QGQ7 1 C1 2 pieces; acinar atrophy & focal fibrosis: 70% & 40% internal & external fat 6.6 Pancreas Pancreas 0001150 477 573 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.993412 176803 0.964211 0.994556 0.760978 24398 1 76 0.00210902 118 0 5.71414e+07 0.0354429 179188 5.74542e+07 3.67992e+06 24431 2.84667e+07 0 0.203233 0.994556 0.756835 5.71414e+07 0.00311842 1.26221e+07 6.34396e+06 1.27144e+07 131 1.26914e+07 8.98813e+06 0.00261314 1.27088e+07 50.0342 0.0031188 0.9957 0 50.1822 GTEX-146FH-1926-SM-5Q5B2 1 C1 6 pieces; well dissected 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 478 572 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99182 233266 0.975595 0.993751 0.847173 21808 1 76 0.00168928 148 0 6.61899e+07 0.0241344 412417 6.66061e+07 5.12028e+06 21818 3.29179e+07 0 0.128422 0.993751 0.841879 6.61899e+07 0.00285301 1.43683e+07 5.6731e+06 1.44522e+07 162 1.43912e+07 1.29089e+07 0.00227002 1.45584e+07 50.2887 0.00619188 0.995681 0 50.1456 GTEX-146FH-2026-SM-5SI9I 1 C1 2 pieces 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 479 571 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988846 276020 0.976749 0.992559 0.831028 23915 1 76 0.00181339 279 0 9.77056e+07 0.0229273 246333 9.84381e+07 1.04588e+07 23945 4.85729e+07 0 0.145721 0.992559 0.824845 9.77056e+07 0.00320666 2.14491e+07 1.01114e+07 2.1637e+07 291 2.16918e+07 1.89151e+07 0.00250742 2.17409e+07 50.0565 0.00250242 0.996272 0 50.218 GTEX-146FH-2126-SM-5SI9U 2 C1 6 pieces; chronic gastritis; 2 have minimal mucosa 6.3 Stomach Stomach 0000945 480 570 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988068 170769 0.976553 0.991323 0.826805 22783 1 76 0.00187603 163 0 6.74568e+07 0.0231563 855304 6.80472e+07 7.38381e+06 22798 3.35271e+07 0 0.149747 0.991323 0.819632 6.74568e+07 0.003212 1.48612e+07 8.96621e+06 1.49433e+07 169 1.49477e+07 1.1993e+07 0.00254182 1.50688e+07 50.2016 0.0125693 0.994579 0 50.1378 GTEX-146FH-2426-SM-5Q5EW 1 C1 6 pieces; small foci of mucosa on 2 6.9 Colon Colon - Sigmoid 0001159 487 564 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991191 158239 0.971286 0.993732 0.803342 23373 1 76 0.00202446 142 0 6.36213e+07 0.0284821 404885 6.40226e+07 8.50745e+06 23391 3.16371e+07 0 0.167944 0.993732 0.798307 6.36213e+07 0.00356363 1.38325e+07 6.16139e+06 1.38752e+07 152 1.38408e+07 1.05812e+07 0.00279208 1.40223e+07 50.3258 0.00632409 0.996273 0 50.0771 GTEX-146FH-2526-SM-5Q5BP 1 C1 2 pieces; atrophic; corpora albicantia; small focus of endometriosis [annotated] 6.7 Ovary Ovary 0000992 490 561 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.986487 371278 0.957066 0.990237 0.705263 23166 1 76 0.00186177 131 0 6.69715e+07 0.042752 52966 6.76317e+07 5.44659e+06 23203 3.32354e+07 0 0.251803 0.990237 0.698377 6.69715e+07 0.00310753 1.44963e+07 1.19454e+07 1.46508e+07 145 1.46638e+07 9.68277e+06 0.00248229 1.47321e+07 50.1162 0.000783153 0.993987 0 50.265 GTEX-146FH-2626-SM-5Q5E1 1 C1 6 pieces; atrophic epithelium 7.6 Vagina Vagina 0000996 491 560 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991774 142018 0.973334 0.993808 0.759644 24624 1 76 0.00215778 140 0 7.56266e+07 0.0263544 120652 7.60978e+07 9.33621e+06 24658 3.76514e+07 0 0.21369 0.993808 0.754941 7.56266e+07 0.00345577 1.68004e+07 7.72558e+06 1.69454e+07 158 1.69475e+07 1.38048e+07 0.00280545 1.69506e+07 50.0045 0.00158549 0.995842 0 50.2148 GTEX-146FQ-0003-SM-5GYCE B1 Blood Whole Blood 0013756 -50 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-146FQ-0003-SM-6WSCH B1 Blood Whole Blood 0013756 -50 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-146FQ-0126-SM-5NQA9 1 B1 6 pieces; up to 50% external (subcutaneous) fat; 38.53um thick epidermis; 10% intradermal fat 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 474 817 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989257 193292 0.97339 0.992074 0.824905 23696 1 76 0.00243788 209 0 8.06638e+07 0.0263805 468717 8.13082e+07 1.07952e+07 23724 4.01257e+07 0 0.148485 0.992074 0.818366 8.06638e+07 0.00540298 1.77189e+07 9.83384e+06 1.77579e+07 208 1.77262e+07 1.30158e+07 0.00391622 1.79655e+07 50.3353 0.00576469 0.994891 0 50.0551 GTEX-146FQ-0226-SM-5NQAL 1 B1 2 fragmented pieces; ~10% fibrovascular component 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 478 813 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988659 284203 0.977808 0.991762 0.815926 23597 1 76 0.00246243 208 0 9.0414e+07 0.0218513 467534 9.1165e+07 1.25361e+07 23620 4.49563e+07 0 0.161882 0.991762 0.809205 9.0414e+07 0.0053297 1.98689e+07 9.89821e+06 2.0081e+07 243 2.01126e+07 1.57966e+07 0.00389158 2.01044e+07 49.9899 0.00512844 0.994865 0 50.2655 GTEX-146FQ-0326-SM-5NQAX 1 B1 2 pieces; one consists of 10% external and 10% internal fat and other less than 10% internal fat 8 Muscle Muscle - Skeletal 0011907 478 813 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990582 200564 0.982163 0.993714 0.873533 22040 1 76 0.00229207 277 0 9.83793e+07 0.017567 1.22665e+06 9.90017e+07 1.41425e+07 22055 4.89484e+07 0 0.10863 0.993714 0.868042 9.83793e+07 0.00503921 2.16244e+07 1.2102e+07 2.175e+07 283 2.17165e+07 1.99847e+07 0.00366131 2.19357e+07 50.2511 0.0123902 0.996845 0 50.1448 GTEX-146FQ-0426-SM-5NQBA 1 B1 2 pieces; one with 10% to 20% external fat and dense connective tissue and other with 10% to 20% internal fat 7.4 Nerve Nerve - Tibial 0001323 479 812 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988108 169991 0.97383 0.991458 0.817605 23369 1 76 0.00236979 155 0 7.1978e+07 0.0258644 218760 7.25982e+07 9.45918e+06 23391 3.57869e+07 0 0.156225 0.991458 0.810621 7.1978e+07 0.00517133 1.58016e+07 8.15324e+06 1.59143e+07 159 1.59337e+07 1.40082e+07 0.00376582 1.60144e+07 50.1262 0.0030133 0.994808 0 50.1777 GTEX-146FQ-0526-SM-5LU9I 1 B1 2 pieces: adventitia measures up to 0.8mm 6.4 Blood Vessel Artery - Tibial 0007610 481 810 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.985959 211177 0.973037 0.98805 0.783634 23201 1 76 0.00454492 124 0 5.73995e+07 0.026611 189429 5.80937e+07 4.91488e+06 23223 2.85284e+07 0 0.189402 0.98805 0.77427 5.73995e+07 0.0038937 1.25084e+07 5.8929e+06 1.25799e+07 124 1.25761e+07 1.01638e+07 0.00422 1.26345e+07 50.1159 0.00326075 0.990141 0 50.1425 GTEX-146FQ-0626-SM-5LU9U 1 B1 2 pieces; congestion 5.8 Spleen Spleen 0002106 501 790 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.98884 263920 0.963744 0.990843 0.784561 23177 1 76 0.00521219 120 0 5.98749e+07 0.0340408 395932 6.04282e+07 5.38558e+06 23198 2.96996e+07 0 0.179182 0.990843 0.777378 5.98749e+07 0.00457484 1.32379e+07 1.33181e+07 1.3305e+07 130 1.33124e+07 8.8411e+06 0.00489416 1.33524e+07 50.075 0.0065521 0.992847 0 50.1264 GTEX-146FQ-0726-SM-5LUA7 1 B1 2 pieces; mild interstitial fibrosis 6.2 Thyroid Thyroid 0002046 508 783 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989875 301650 0.965989 0.991994 0.729321 23592 1 76 0.00461341 115 0 5.79063e+07 0.0337644 210565 5.83736e+07 4.85804e+06 23625 2.87797e+07 0 0.236668 0.991994 0.723483 5.79063e+07 0.00399002 1.2701e+07 6.02357e+06 1.27406e+07 121 1.27575e+07 8.43829e+06 0.00430238 1.28048e+07 50.0924 0.0036072 0.994113 0 50.0778 GTEX-146FQ-0826-SM-5LUAJ 1 B1 6 pieces; 7.6 Blood Vessel Artery - Aorta 0001496 510 781 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99119 316456 0.978236 0.993302 0.837567 21014 1 76 0.00443231 132 0 5.73412e+07 0.0213356 111088 5.77279e+07 4.88052e+06 21023 2.85032e+07 0 0.140669 0.993302 0.831957 5.73412e+07 0.00378843 1.24446e+07 4.4425e+06 1.25063e+07 132 1.25167e+07 1.07879e+07 0.00411105 1.25554e+07 50.077 0.00192434 0.995414 0 50.1236 GTEX-146FQ-0926-SM-5LUAV 1 B1 2 pieces; thick pleura covering 1/3 of the surface of 1 piece (outlined); segmental atelectasis (arrows) emphysema 7.4 Lung Lung 0008952 513 778 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990955 230433 0.973058 0.992819 0.765999 23993 1 76 0.0045858 116 0 6.07361e+07 0.0266507 146393 6.11754e+07 5.14856e+06 24020 3.02113e+07 0 0.207059 0.992819 0.760498 6.07361e+07 0.00381133 1.34231e+07 5.76434e+06 1.35248e+07 123 1.35312e+07 1.04044e+07 0.00419929 1.35267e+07 49.9917 0.002393 0.994683 0 50.1887 GTEX-146FQ-1026-SM-5LU8I 1 B1 4 pieces; squamous epithelim up to 224.4um thick; submucosal mucus glands occupy up to 20% 7.1 Esophagus Esophagus - Mucosa 0006920 517 774 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989142 415505 0.975873 0.991692 0.818118 22843 1 76 0.00454752 130 0 5.99418e+07 0.0238063 285188 6.0444e+07 5.18277e+06 22861 2.97665e+07 0 0.157755 0.991692 0.811321 5.99418e+07 0.00402293 1.34127e+07 6.8971e+06 1.35101e+07 133 1.35258e+07 1.12887e+07 0.0042859 1.35504e+07 50.0454 0.00471822 0.994242 0 50.1808 GTEX-146FQ-1126-SM-5NQBM 1 B1 6 pieces (one of them fragmented); well trimmed 6.9 Esophagus Esophagus - Muscularis 0004648 521 770 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990023 196237 0.974199 0.992969 0.861444 22046 1 76 0.00232374 273 0 8.94682e+07 0.0255282 462829 9.01017e+07 1.26433e+07 22059 4.4515e+07 0 0.112755 0.992969 0.855388 8.94682e+07 0.00499424 1.90565e+07 9.01397e+06 1.92119e+07 259 1.91689e+07 1.72343e+07 0.00365503 1.93374e+07 50.2189 0.00513674 0.995915 0 50.203 GTEX-146FQ-1226-SM-5QGQ4 1 B1 6 pieces; submucosal fibrous tissue occupies up to 50% 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 525 766 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.991453 213471 0.979389 0.992683 0.834455 23341 1 76 0.00198348 313 0 8.57019e+07 0.0203394 628239 8.63336e+07 5.62674e+06 23361 4.2715e+07 0 0.144934 0.992683 0.82835 8.57019e+07 0.00285592 1.92072e+07 4.22033e+07 1.94178e+07 269 1.93678e+07 1.706e+07 0.00241916 1.93605e+07 49.9905 0.00727688 0.993914 0 50.2727 GTEX-146FQ-1526-SM-5Q5CX 1 B1 2 pieces; well preserved with islets; less than 10% and ~15% of external fat 7.9 Pancreas Pancreas 0001150 528 763 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.986411 147300 0.979649 0.988728 0.849308 21677 1 76 0.00235453 104 0 8.01359e+07 0.0200576 243899 8.10495e+07 1.04598e+07 21693 3.98941e+07 0 0.130341 0.988728 0.839735 8.01359e+07 0.00379539 1.84022e+07 2.903e+07 1.85662e+07 123 1.84554e+07 2.42593e+07 0.00307327 1.86986e+07 50.3274 0.00300926 0.991045 0 50.2218 GTEX-146FQ-1726-SM-5QGPX 1 B1 2 pieces; 1 consists of fibromuscular stroma only and other is composed of tubuloalveolar glands embedded in fibromuscular stroma; two tiny separated prostatic tissue fragments 6 Prostate Prostate 0002367 538 753 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.989788 192325 0.956482 0.990679 0.758709 24274 1 76 0.00204874 126 0 5.92399e+07 0.0432824 399694 5.97973e+07 3.9982e+06 24308 2.9511e+07 0 0.197773 0.990679 0.751636 5.92399e+07 0.00295298 1.28671e+07 9.37846e+06 1.29634e+07 143 1.28955e+07 8.53668e+06 0.00250045 1.29967e+07 50.1955 0.00668415 0.991569 0 50.1864 GTEX-146FQ-1926-SM-5NQBY 1 B1 4 pieces; 1 has mucosa only 7.2 Colon Colon - Transverse 0001157 543 748 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988614 245776 0.972546 0.991354 0.8147 24117 1 76 0.00251599 279 0 8.80039e+07 0.0270341 864592 8.87714e+07 1.23067e+07 24145 4.37906e+07 0 0.157847 0.991354 0.807656 8.80039e+07 0.00514082 1.95486e+07 1.43085e+07 1.95691e+07 258 1.95684e+07 1.44209e+07 0.00382478 1.97775e+07 50.2657 0.00973954 0.994095 0 50.0262 GTEX-146FQ-2126-SM-5RQHU 1 B1 6 pieces; well trimmed; no dermall fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 551 740 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99292 129403 0.974399 0.993764 0.814102 23578 1 76 0.0020877 169 0 7.1268e+07 0.0253635 295091 7.17152e+07 3.31796e+06 23600 3.55047e+07 0 0.160297 0.993764 0.809026 7.1268e+07 0.00286344 1.5675e+07 7.3217e+06 1.58162e+07 176 1.57689e+07 1.21804e+07 0.00247524 1.57858e+07 50.0266 0.00411477 0.994608 0 50.2241 GTEX-146FQ-5004-SM-AN41I B1 Muscle Muscle - Skeletal 0011907 478 ChIP-Seq GTEX-146FR-0004-SM-5DU4Q B1 Blood Whole Blood 0013756 1360 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-146FR-0004-SM-6WSBD B1 Blood Whole Blood 0013756 1360 BP-45812 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/15/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-146FR-0126-SM-5Q5F3 1 B1 2 pieces, islets well preserved, rep. delineated 7.2 Pancreas Pancreas 0001150 1572 872 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991187 186357 0.978119 0.993679 0.854101 21469 1 76 0.00205096 107 0 7.56069e+07 0.021635 247160 7.60879e+07 1.15771e+07 21485 3.76339e+07 0 0.124018 0.993679 0.848702 7.56069e+07 0.00339201 1.73847e+07 2.04486e+07 1.75597e+07 122 1.75045e+07 2.31414e+07 0.0027198 1.76287e+07 50.1769 0.00324835 0.996171 0 50.2503 GTEX-146FR-0226-SM-5Q5F6 1 B1 2 pieces, essentially pure adipose tissue 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1574 870 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990497 210484 0.975588 0.99302 0.828469 23010 1 76 0.00202394 204 0 7.94301e+07 0.0241605 1.27813e+06 7.99884e+07 1.08166e+07 23027 3.95188e+07 0 0.14712 0.99302 0.822686 7.94301e+07 0.0035868 1.75171e+07 9.96813e+06 1.75908e+07 229 1.74825e+07 1.18149e+07 0.00280339 1.78164e+07 50.4729 0.0159789 0.995542 0 50.105 GTEX-146FR-0326-SM-5SI8U 1 B1 2 pieces, incidental 2mm colloid cyst, encircled, no abnormalities 7.6 Thyroid Thyroid 0002046 1577 867 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990245 203071 0.965332 0.992521 0.752143 24304 1 76 0.00188149 207 0 8.44613e+07 0.0343387 325601 8.50977e+07 8.12298e+06 24349 4.2049e+07 0 0.213189 0.992521 0.746518 8.44613e+07 0.00278293 1.84369e+07 9.67268e+06 1.85779e+07 212 1.8566e+07 1.41288e+07 0.00233118 1.86296e+07 50.0855 0.0038262 0.994798 0 50.1904 GTEX-146FR-0426-SM-5SI97 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~10-15% thickness. Submucosal mucus glands noted, rep encircled 9.7 Esophagus Esophagus - Mucosa 0006920 1586 858 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990498 209075 0.978598 0.992704 0.842128 22464 1 76 0.00186797 209 0 8.48632e+07 0.021067 470510 8.54869e+07 8.46306e+06 22483 4.22591e+07 0 0.13647 0.992704 0.835984 8.48632e+07 0.00304785 1.90921e+07 1.24112e+07 1.92009e+07 236 1.92111e+07 1.74673e+07 0.0024566 1.92636e+07 50.0682 0.00550389 0.994911 0 50.1421 GTEX-146FR-0526-SM-5Q5EX 1 B1 6 pieces, all target muscularis, good specimens 7.7 Esophagus Esophagus - Muscularis 0004648 1600 844 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990931 245923 0.976737 0.993341 0.826849 23294 1 76 0.00195893 285 0 1.08915e+08 0.0229702 1.10421e+06 1.09645e+08 1.5842e+07 23321 5.42108e+07 0 0.149888 0.993341 0.821343 1.08915e+08 0.0032508 2.35776e+07 1.09195e+07 2.37027e+07 325 2.36428e+07 1.83593e+07 0.0026033 2.38858e+07 50.2557 0.0100708 0.995752 0 50.1324 GTEX-146FR-0626-SM-5RQJ1 1 B1 2 pieces, minimal interstitial fibrosis; subacute/agonal ischemic changes (contraction bands) prominent; rep encircled 8 Heart Heart - Left Ventricle 0006566 1617 827 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993502 197828 0.984286 0.994567 0.86241 20571 1 76 0.00175113 267 0 8.5143e+07 0.0154507 1.96665e+06 8.56081e+07 4.32184e+06 20578 4.24376e+07 0 0.121876 0.994567 0.857724 8.5143e+07 0.0024005 1.86475e+07 1.60038e+07 1.88597e+07 273 1.87011e+07 1.43787e+07 0.00207547 1.88808e+07 50.2391 0.0229727 0.995632 0 50.283 GTEX-146FR-0926-SM-5QGPE 1 B1 2 pieces, no abnormalities 8.3 Heart Heart - Atrial Appendage 0006631 1626 818 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993557 162538 0.97936 0.994755 0.828972 21525 1 76 0.00170484 266 0 8.47968e+07 0.0200954 1.62143e+06 8.52439e+07 5.68472e+06 21538 4.22623e+07 0 0.150387 0.994755 0.824624 8.47968e+07 0.00255281 1.79465e+07 1.85113e+07 1.80946e+07 270 1.7904e+07 1.29606e+07 0.00212831 1.82345e+07 50.4572 0.019021 0.995952 0 50.2054 GTEX-146FR-1026-SM-5NQ9T 1 B1 6 pieces, minimal atherosis 8.3 Blood Vessel Artery - Aorta 0001496 1632 812 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990641 182325 0.976763 0.993196 0.846696 22538 1 76 0.00224462 209 0 8.6048e+07 0.0228348 313599 8.66375e+07 1.11361e+07 22559 4.282e+07 0 0.130067 0.993196 0.840936 8.6048e+07 0.00499054 1.86267e+07 6.62938e+06 1.8755e+07 233 1.87521e+07 1.69042e+07 0.00361405 1.88367e+07 50.1125 0.00361967 0.995752 0 50.1716 GTEX-146FR-1226-SM-5SIA7 1 B1 2 pieces, glandular elements ~80% of specimen, rep delineated; good specimen 8.1 Salivary Gland Minor Salivary Gland 0006330 1634 810 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991994 177430 0.973479 0.993849 0.824275 24154 1 76 0.00197913 224 0 8.13703e+07 0.0257443 555792 8.18739e+07 7.22873e+06 24178 4.05106e+07 0 0.149204 0.993849 0.819205 8.13703e+07 0.00302879 1.81284e+07 1.03212e+07 1.81639e+07 246 1.8139e+07 1.42553e+07 0.00250298 1.82968e+07 50.2165 0.00678839 0.995705 0 50.0489 GTEX-146FR-1326-SM-5SIAJ 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~40 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1635 809 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 EXCLUDE 0.990573 187399 0.972535 0.993321 0.804998 23627 1 76 0.00188011 196 0 7.23441e+07 0.0272321 364840 7.28306e+07 6.84294e+06 23648 3.60011e+07 0 0.167537 0.993321 0.799621 7.23441e+07 0.00305669 1.57487e+07 7.92065e+06 1.58439e+07 178 1.5855e+07 1.26822e+07 0.00246677 1.59267e+07 50.1129 0.00500944 0.996069 0 50.1506 GTEX-146FR-1326-SM-E9J48 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~40 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1635 809 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.993749 331582 0.972201 0.994543 0.786937 23542 1 76 0.00176561 174 0 7.83631e+07 0.0274749 395808 7.87931e+07 3.97733e+06 23573 3.90451e+07 0 0.185265 0.994543 0.782642 7.83631e+07 0.00256663 1.71944e+07 6.48344e+06 1.73457e+07 189 1.72904e+07 1.35757e+07 0.0021658 1.73138e+07 50.0338 0.00502338 0.995336 0 50.219 GTEX-146FR-1426-SM-5SIAV 0 B1 2 pieces, focal adherent fat up to ~1mm, delineated 7.3 Nerve Nerve - Tibial 0001323 1636 808 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987599 271945 0.967619 0.991439 0.756875 24863 1 76 0.00191644 223 0 9.07507e+07 0.0321141 476823 9.15344e+07 1.016e+07 24901 4.5093e+07 0 0.210744 0.991439 0.750395 9.07507e+07 0.00306872 1.98392e+07 9.79148e+06 2.00394e+07 252 2.00824e+07 1.38592e+07 0.00249035 2.01265e+07 50.0548 0.00520922 0.995279 0 50.2511 GTEX-146FR-1526-SM-5SIB8 1 B1 2 pieces, all cortex, well preserved, ~10% adherent / interstitial fate 8.2 Adrenal Gland Adrenal Gland 0002369 1640 804 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992744 201358 0.97742 0.994732 0.833446 22813 1 76 0.00178154 269 0 8.05016e+07 0.0222394 1.77405e+06 8.09279e+07 7.97842e+06 22831 4.0099e+07 0 0.143974 0.994732 0.829055 8.05016e+07 0.00271428 1.77689e+07 1.23186e+07 1.76841e+07 259 1.76112e+07 1.28174e+07 0.00224698 1.79878e+07 50.5289 0.0219213 0.996721 0 49.8805 GTEX-146FR-1626-SM-5Q5DS 0 B1 2 pieces adherent fat/fibrous tissue up to ~2mm, delineated 7.6 Blood Vessel Artery - Tibial 0007610 1639 805 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991943 168660 0.977599 0.994144 0.866162 21224 1 76 0.00194078 172 0 7.48631e+07 0.0220482 636150 7.53041e+07 1.08215e+07 21236 3.72547e+07 0 0.111437 0.994144 0.861089 7.48631e+07 0.003336 1.61938e+07 6.18682e+06 1.63036e+07 198 1.62379e+07 1.40136e+07 0.00263684 1.64185e+07 50.2766 0.00844775 0.996344 0 50.1689 GTEX-146FR-1726-SM-5Q5DT 0 B1 2 pieces, ~5-10% interstitial fat, rep delineated 8.4 Muscle Muscle - Skeletal 0011907 1642 802 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.992442 191617 0.982995 0.994691 0.88169 20438 1 76 0.00179357 279 0 8.77472e+07 0.0167437 1.2067e+06 8.82156e+07 1.27314e+07 20445 4.36984e+07 0 0.101306 0.994691 0.877008 8.77472e+07 0.00315837 1.90944e+07 1.05948e+07 1.91759e+07 270 1.9163e+07 1.86506e+07 0.00247443 1.92878e+07 50.1622 0.013679 0.996939 0 50.1064 GTEX-146FR-1826-SM-5QGPF 0 B1 2 pieces, no fascia/vascular tissue 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1644 800 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992645 173428 0.976054 0.994004 0.82349 23093 1 76 0.00181042 276 0 8.64417e+07 0.0236537 755792 8.69632e+07 6.20291e+06 23117 4.30712e+07 0 0.152565 0.994004 0.818552 8.64417e+07 0.00269924 1.89626e+07 8.51289e+06 1.91382e+07 265 1.90362e+07 1.42697e+07 0.00225422 1.91793e+07 50.1871 0.00869094 0.995362 0 50.2304 GTEX-146FR-1926-SM-5NQA6 1 B1 2 pieces, no abnormalities 7.5 Spleen Spleen 0002106 1645 799 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987581 282639 0.964757 0.990529 0.790526 24106 1 76 0.00269808 163 0 8.17254e+07 0.0344047 455855 8.25068e+07 1.1653e+07 24133 4.0618e+07 0 0.17423 0.990529 0.783039 8.17254e+07 0.00549926 1.78979e+07 1.18518e+07 1.80506e+07 188 1.80605e+07 1.3426e+07 0.0040945 1.81171e+07 50.0783 0.00552506 0.993477 0 50.2123 GTEX-146FR-2026-SM-5NQAI 1 B1 6 pieces, muscularis only, mucosa sloughed 8.1 Stomach Stomach 0000945 1649 795 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988608 208260 0.976044 0.991853 0.835269 23333 1 76 0.00226692 281 0 9.13216e+07 0.0236237 777573 9.20717e+07 1.37061e+07 23354 4.54196e+07 0 0.140775 0.991853 0.828464 9.13216e+07 0.00507091 1.99013e+07 9.03272e+06 2.00754e+07 265 2.00493e+07 1.6593e+07 0.00366433 2.02038e+07 50.1919 0.0084453 0.995098 0 50.2178 GTEX-146FR-2426-SM-5NQAU 1 B1 6 pieces, squamous mucosa ~0.3mm 7.4 Vagina Vagina 0000996 1658 786 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989543 184339 0.972412 0.992355 0.791012 24274 1 76 0.00232174 209 0 8.44827e+07 0.0273122 704302 8.51336e+07 1.15199e+07 24313 4.20301e+07 0 0.1814 0.992355 0.784964 8.44827e+07 0.00486151 1.85705e+07 8.40138e+06 1.86321e+07 232 1.86332e+07 1.33748e+07 0.00358803 1.87904e+07 50.21 0.0082729 0.995166 0 50.0828 GTEX-146FR-5007-SM-AN41G B1 Heart Heart - Left Ventricle 0006566 1648 ChIP-Seq GTEX-146FR-5016-SM-AN41E B1 Muscle Muscle - Skeletal 0011907 1648 ChIP-Seq GTEX-14753-0003-SM-5GYBX B1 Blood Whole Blood 0013756 598 BP-45848 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/18/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14753-0003-SM-6WSBF B1 Blood Whole Blood 0013756 598 BP-45848 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/18/2013 LCSET-6066 10/06/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14753-0011-R10a-SM-AHZ7C B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 633 ChIP-Seq GTEX-14753-0011-R10b-SM-5S2WE B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 633 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991905 668654 0.965515 0.994098 0.843294 21499 1 76 0.00243099 267 0 7.92503e+07 0.0342777 6.66211e+06 7.97207e+07 7.52216e+06 21512 3.94423e+07 0 0.122221 0.994098 0.838317 7.92503e+07 0.00371575 1.72169e+07 3.24191e+07 1.74763e+07 330 1.70595e+07 5.91796e+06 0.00307195 1.77852e+07 51.0414 0.083568 0.996292 0 50.3738 GTEX-14753-0011-R5a-SM-5S2VW B1, A1 5.7 Brain Brain - Caudate (basal ganglia) 0001873 633 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988285 539255 0.966505 0.990593 0.814972 19081 1 76 0.00272271 263 0 7.56338e+07 0.0334325 7.72443e+06 7.6352e+07 7.51521e+06 19087 3.76629e+07 0 0.151532 0.990593 0.807306 7.56338e+07 0.00385422 1.62362e+07 5.29584e+07 1.61448e+07 312 1.57838e+07 2.81347e+06 0.00328715 1.67393e+07 51.4689 0.101169 0.992901 0 49.859 GTEX-14753-0011-R6b-SM-5S2UD B1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 633 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.98695 1.87429e+06 0.930755 0.990033 0.821289 19582 1 76 0.00325773 366 0 9.49258e+07 0.0690903 1.23711e+07 9.58815e+07 9.89633e+06 19593 4.72119e+07 0 0.109466 0.990033 0.813103 9.49258e+07 0.00456789 2.01155e+07 7.79006e+07 2.01956e+07 349 1.95963e+07 3.26397e+06 0.00391077 2.10176e+07 51.7498 0.129025 0.993115 0 50.0994 GTEX-14753-0011-R8b-SM-5S2U1 B1, A1 5.9 Brain Brain - Hypothalamus 0001898 633 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989674 783520 0.963472 0.992544 0.851476 20327 1 76 0.00272148 368 0 8.8072e+07 0.0364307 1.14723e+07 8.87337e+07 8.29319e+06 20336 4.3808e+07 0 0.111996 0.992544 0.845128 8.8072e+07 0.00419137 1.95769e+07 4.56159e+07 1.91917e+07 384 1.87776e+07 3.67317e+06 0.0034543 2.02087e+07 51.8353 0.129289 0.995414 0 49.5033 GTEX-14753-0126-SM-5S2TX 1 B1 2 pieces; 40% external fat on 1, 30% internal & external fat on other 6.4 Nerve Nerve - Tibial 0001323 799 829 BP-48818 RNA Extraction from Paxgene-derived Lysate Plate Based 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990873 195016 0.970954 0.992942 0.730776 23323 1 76 0.00206783 185 0 7.84192e+07 0.0287464 299904 7.89766e+07 7.05118e+06 23365 3.9014e+07 0 0.240178 0.992942 0.725617 7.84192e+07 0.00323582 1.73001e+07 6.77538e+06 1.7411e+07 175 1.73782e+07 1.18405e+07 0.00265061 1.74937e+07 50.1656 0.00379738 0.99501 0 50.1598 GTEX-14753-0226-SM-5Q5CH 1 B1 2 pieces; well trimmed; no plaques; minute calcium deposit 7.4 Blood Vessel Artery - Tibial 0007610 803 825 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991346 134366 0.97724 0.993556 0.854475 20046 1 76 0.00171691 138 0 6.38705e+07 0.0223712 304482 6.42848e+07 4.93993e+06 20058 3.17566e+07 0 0.122765 0.993556 0.848969 6.38705e+07 0.00279667 1.35643e+07 4.9865e+06 1.36266e+07 153 1.35614e+07 1.31615e+07 0.00225559 1.37658e+07 50.3739 0.00473646 0.995767 0 50.1146 GTEX-14753-0326-SM-5QGQB 1 B1 2 pieces 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 806 822 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992165 227534 0.975984 0.993512 0.798843 21581 1 76 0.00195761 130 0 5.93666e+07 0.023729 307710 5.97543e+07 3.79765e+06 21603 2.95501e+07 0 0.177141 0.993512 0.79366 5.93666e+07 0.00300997 1.2939e+07 5.08477e+06 1.30529e+07 148 1.29855e+07 9.97649e+06 0.00248308 1.30887e+07 50.1978 0.00514959 0.994859 0 50.2191 GTEX-14753-0426-SM-5NQAM 1 B1 4 small pieces; up to 20% dermal fat 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 808 820 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989693 174910 0.973213 0.992592 0.833981 23079 1 76 0.00244932 175 0 7.17358e+07 0.0265615 509905 7.22712e+07 9.74133e+06 23096 3.56714e+07 0 0.139232 0.992592 0.827802 7.17358e+07 0.00539655 1.56883e+07 9.31973e+06 1.57839e+07 174 1.57603e+07 1.23399e+07 0.00391863 1.59123e+07 50.2399 0.00705544 0.995491 0 50.1519 GTEX-14753-0526-SM-5QGPR 1 B1 2 pieces; 10 & 5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 809 819 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994832 181246 0.984561 0.995805 0.877702 18372 1 76 0.00182636 162 0 7.12552e+07 0.0152076 1.1558e+06 7.15553e+07 5.20097e+06 18377 3.55282e+07 0 0.106858 0.995805 0.874021 7.12552e+07 0.00257742 1.56799e+07 8.67117e+06 1.56578e+07 179 1.56287e+07 1.44931e+07 0.00220152 1.57727e+07 50.2293 0.0161525 0.996778 0 49.9647 GTEX-14753-0526-SM-CYKNW 1 B1 2 pieces; 10 & 5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 809 819 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 RIP-Seq GTEX-14753-0626-SM-5Q5CY 2 B1 2 pieces 6.6 Testis Testis 0000473 824 804 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.986895 221718 0.927907 0.989894 0.712187 33457 1 76 0.00231686 173 0 8.5744e+07 0.0718027 1.00039e+06 8.66194e+07 1.26471e+07 33523 4.26371e+07 0 0.21572 0.989894 0.704989 8.5744e+07 0.00385277 1.78154e+07 1.25877e+07 1.79111e+07 177 1.7944e+07 1.26631e+07 0.00308249 1.80151e+07 50.0988 0.0115492 0.992894 0 50.1339 GTEX-14753-0726-SM-5QGQO 1 B1 6 pieces; 20% dermal fat in the 2 larger pieces 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 827 801 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992096 143857 0.974203 0.993655 0.790637 23772 1 76 0.00208517 142 0 6.12170e+07 0.025569 350401 6.16079e+07 4.08904e+06 23796 3.04876e+07 0 0.183566 0.993655 0.785621 6.12170e+07 0.00305959 1.34314e+07 6.90297e+06 1.35331e+07 144 1.34971e+07 1.04237e+07 0.00257161 1.35632e+07 50.1222 0.00568759 0.995214 0 50.1885 GTEX-14753-0926-SM-5Q5BI 2 B1 2 pieces 5.9 Thyroid Thyroid 0002046 869 759 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.987385 241396 0.961921 0.990606 0.713745 23819 1 76 0.00204492 128 0 6.55861e+07 0.0378343 290885 6.62081e+07 4.8404e+06 23853 3.25693e+07 0 0.248176 0.990606 0.70704 6.55861e+07 0.00322785 1.42469e+07 6.79434e+06 1.43552e+07 148 1.43675e+07 8.31427e+06 0.00263446 1.44407e+07 50.1271 0.00439349 0.993826 0 50.1894 GTEX-14753-1626-SM-5NQ9L 1 B1 2 pieces; moderate centrilobular congestion 6.6 Liver Liver 0001114 893 735 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990627 224644 0.982623 0.993081 0.870405 19836 1 76 0.00268462 267 0 9.51241e+07 0.0170774 1.7754e+06 9.57868e+07 1.18307e+07 19849 4.73552e+07 0 0.112218 0.993081 0.864383 9.51241e+07 0.00523107 2.05563e+07 2.04324e+07 2.04922e+07 274 2.05076e+07 1.7465e+07 0.0039547 2.07522e+07 50.2964 0.018535 0.995535 0 49.922 GTEX-14753-1726-SM-5NQ9X 2 B1 2 pieces; 50% external fat 5.9 Adrenal Gland Adrenal Gland 0002369 894 734 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990042 364522 0.971065 0.992669 0.830617 20355 1 76 0.00297988 266 0 9.16273e+07 0.0287651 7.29833e+06 9.23039e+07 1.09688e+07 20367 4.56059e+07 0 0.140448 0.992669 0.824527 9.16273e+07 0.00576748 1.98255e+07 3.17872e+07 2.02812e+07 328 2.02059e+07 7.02818e+06 0.00436999 2.00894e+07 49.8555 0.0790684 0.995296 0 50.5681 GTEX-14753-1926-SM-5NQAA 1 B1 6 pieces; well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 900 728 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989827 174896 0.973506 0.992451 0.83107 22482 1 76 0.00256714 269 0 8.58096e+07 0.0263088 2.76628e+06 8.64623e+07 1.10564e+07 22502 4.26972e+07 0 0.142436 0.992451 0.824796 8.58096e+07 0.00530799 1.88519e+07 1.06236e+07 1.89233e+07 294 1.88696e+07 1.0642e+07 0.00393394 1.91102e+07 50.3167 0.031994 0.995075 0 50.0946 GTEX-14753-2426-SM-5LU8U 1 B1 2 pieces; fibrofatty tissue, no ducts 5.9 Breast Breast - Mammary Tissue 0008367 913 715 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989467 239735 0.97874 0.991458 0.786615 21918 1 76 0.004664 146 0 6.71588e+07 0.020943 454593 6.77375e+07 5.66168e+06 21942 3.3378e+07 0 0.192125 0.991458 0.779895 6.71588e+07 0.00395911 1.4734e+07 7.95675e+06 1.47999e+07 154 1.47926e+07 1.05488e+07 0.00431226 1.48753e+07 50.1395 0.0067111 0.993448 0 50.1116 GTEX-14753-2526-SM-5LU97 1 B1 2 pieces 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 915 713 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989364 271119 0.978308 0.991651 0.804004 22293 1 76 0.00457807 137 0 6.63927e+07 0.0213627 471111 6.69516e+07 5.8903e+06 22315 3.29884e+07 0 0.174304 0.991651 0.797291 6.63927e+07 0.00400928 1.4613e+07 7.99392e+06 1.47107e+07 151 1.47127e+07 1.14041e+07 0.00429433 1.47622e+07 50.084 0.00703659 0.993938 0 50.1666 GTEX-14753-2926-SM-5LU9J 2 B1 1 piece; 15% neurohypophysis [outlined] 6.1 Pituitary Pituitary 0000007 947 681 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989306 677124 0.95162 0.991956 0.753848 25553 1 76 0.00464127 195 0 9.39307e+07 0.0481346 821636 9.46925e+07 8.51348e+06 25587 4.66799e+07 0 0.197771 0.991956 0.747784 9.39307e+07 0.00417336 1.96125e+07 2.26124e+07 1.9879e+07 215 1.99052e+07 1.29665e+07 0.00440794 1.98356e+07 49.9124 0.00867689 0.994605 0 50.3374 GTEX-1477Z-0003-SM-5DU3M B1 Blood Whole Blood 0013756 601 BP-45848 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/18/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1477Z-0003-SM-6WSBA B1 Blood Whole Blood 0013756 601 BP-45848 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/18/2013 LCSET-6066 09/28/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1477Z-0005-SM-5PNWD B1 6.5 Blood Whole Blood 0013756 601 BP-45847 RNA isolation_PAXgene Blood RNA (Manual) 11/18/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.959553 249430 0.984178 0.961093 0.803202 17634 1 76 0.00228445 79 0 7.62662e+07 0.0145397 94419 7.93535e+07 8.53143e+06 17639 3.79617e+07 0 0.180976 0.961093 0.771952 7.62662e+07 0.00340386 1.80986e+07 1.42996e+08 1.85192e+07 119 1.85156e+07 2.18837e+07 0.00284326 1.82327e+07 49.615 0.00118985 0.962634 0 50.5743 GTEX-1477Z-0011-R10a-SM-AHZ6Z B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 605 ChIP-Seq GTEX-1477Z-0011-R10b-SM-5S2RF B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 605 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992057 610479 0.947148 0.993383 0.827509 20894 1 76 0.00169173 140 0 5.34124e+07 0.0526463 5.33277e+06 5.37682e+07 3.10305e+06 20903 2.6601e+07 0 0.119638 0.993383 0.822034 5.34124e+07 0.00258694 1.14967e+07 2.41898e+07 1.16505e+07 174 1.14617e+07 4.21061e+06 0.00213874 1.17632e+07 50.649 0.0991808 0.994709 0 50.3322 GTEX-1477Z-0011-R10b-SM-CYKRY B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 605 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 RIP-Seq GTEX-1477Z-0011-R3b-SM-5PNX9 B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 605 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.991501 1.56916e+06 0.941725 0.992366 0.804034 21834 1 76 0.00283566 369 0 1.03450e+08 0.0580562 1.33919e+07 1.04246e+08 3.02758e+06 21847 5.15324e+07 0 0.137691 0.992366 0.797896 1.03450e+08 0.00332457 2.14838e+07 7.1429e+07 2.24753e+07 376 2.19544e+07 6.35564e+06 0.0030799 2.2113e+07 50.18 0.128464 0.993231 0 51.1278 GTEX-1477Z-0011-R5b-SM-5PNUO B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 605 BP-48229 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.990645 560255 0.963155 0.992049 0.815325 21440 1 76 0.0017798 265 0 7.85266e+07 0.036727 8.06442e+06 7.91559e+07 6.30724e+06 21452 3.91416e+07 0 0.14783 0.992049 0.808842 7.85266e+07 0.00275962 1.64337e+07 4.76184e+07 1.72976e+07 315 1.68575e+07 4.50431e+06 0.00226902 1.69385e+07 50.1198 0.10188 0.993453 0 51.2805 GTEX-1477Z-0011-R8b-SM-5S2RG B1, A1 6.8 Brain Brain - Hypothalamus 0001898 605 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.992075 879811 0.946858 0.993483 0.820654 22849 1 76 0.00162141 369 0 7.75191e+07 0.0529953 7.78691e+06 7.80276e+07 3.97231e+06 22864 3.85764e+07 0 0.126205 0.993483 0.815306 7.75191e+07 0.00239848 1.66163e+07 3.61441e+07 1.69106e+07 348 1.66074e+07 5.03684e+06 0.0020094 1.7035e+07 50.6354 0.0997969 0.994892 0 50.4389 GTEX-1477Z-0226-SM-5TDCI 1 B1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 645 967 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988655 201455 0.956904 0.991416 0.701337 26720 1 76 0.00237595 140 0 7.79449e+07 0.0428513 410408 7.86198e+07 9.51884e+06 26764 3.87438e+07 0 0.255566 0.991416 0.695317 7.79449e+07 0.00407 1.68241e+07 8.33957e+06 1.69072e+07 159 1.69118e+07 1.10297e+07 0.00322061 1.70274e+07 50.1704 0.00522016 0.994176 0 50.1233 GTEX-1477Z-0326-SM-7IGLA 0 B1 6 pieces, minimal dermal fat; squamous epithelium is 35-40 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 650 962 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994589 157537 0.971014 0.99531 0.778003 24717 1 76 0.00211593 175 0 7.76727e+07 0.0287484 527170 7.80387e+07 5.13908e+06 24750 3.87278e+07 0 0.193011 0.99531 0.774354 7.76727e+07 0.00270936 1.70212e+07 7.52658e+06 1.71946e+07 185 1.7146e+07 1.28067e+07 0.00241243 1.71288e+07 49.9749 0.00675524 0.99603 0 50.2533 GTEX-1477Z-0626-SM-5NQB7 2 B1 2 pieces, moderate-marked congestion/edema, bronchial mucosa sloughed 6.2 Lung Lung 0008952 667 945 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987151 199289 0.967128 0.990078 0.761057 23862 1 76 0.00249496 124 0 6.37758e+07 0.0325773 472393 6.44149e+07 8.17849e+06 23887 3.16811e+07 0 0.206071 0.990078 0.753506 6.37758e+07 0.00535044 1.40177e+07 1.2551e+07 1.41255e+07 142 1.41096e+07 9.8602e+06 0.00391848 1.42178e+07 50.191 0.0073336 0.993005 0 50.1917 GTEX-1477Z-0626-SM-CYKRO 2 B1 2 pieces, moderate-marked congestion/edema, bronchial mucosa sloughed 6.2 Lung Lung 0008952 667 945 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 RIP-Seq GTEX-1477Z-1126-SM-5P9GK 2 B1 2 pieces cerebellum 7.1 Heart Heart - Atrial Appendage 0006631 693 919 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987679 304418 0.969702 0.987197 0.785488 23784 1 76 0.00304352 268 0 1.01239e+08 0.0292656 4.41016e+06 1.02552e+08 4.11486e+06 23815 5.02247e+07 0 0.184214 0.987197 0.775431 1.01239e+08 0.0039013 2.16473e+07 1.23828e+07 2.1821e+07 325 2.16783e+07 1.28863e+07 0.00347262 2.17503e+07 50.0829 0.0430043 0.986715 0 50.1998 GTEX-1477Z-1526-SM-5SI9V 0 B1 2 pieces, focally adherent fat up to ~0.5mm, delineated 6.3 Nerve Nerve - Tibial 0001323 710 902 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987168 540704 0.943619 0.990663 0.711474 24743 1 76 0.00203772 164 0 7.62999e+07 0.0561277 394168 7.70191e+07 7.60722e+06 24777 3.78907e+07 0 0.232145 0.990663 0.70483 7.62999e+07 0.00344114 1.62355e+07 2.49474e+07 1.64629e+07 166 1.64541e+07 1.16195e+07 0.00273696 1.65171e+07 50.0955 0.0051178 0.994158 0 50.3477 GTEX-1477Z-1626-SM-5SIA8 0 B1 2 pieces, atrophic muscle fibers; interstitial fat/connective tissue is ~40%, rep delineated 7.7 Muscle Muscle - Skeletal 0011907 712 900 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991488 168242 0.976282 0.994195 0.838171 20492 1 76 0.00167044 137 0 5.76399e+07 0.0234796 1.1828e+06 5.79765e+07 5.74528e+06 20505 2.86834e+07 0 0.138111 0.994195 0.833305 5.76399e+07 0.002829 1.24951e+07 6.33672e+06 1.25391e+07 140 1.25101e+07 1.16251e+07 0.00224815 1.26686e+07 50.3149 0.0204013 0.996901 0 50.0879 GTEX-1477Z-2126-SM-5Q5CM 1 B1 6 pieces, all target muscularis 5.7 Colon Colon - Sigmoid 0001159 726 886 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.983747 334622 0.960701 0.986449 0.803282 24302 1 76 0.00213975 377 0 9.98895e+07 0.0390939 1.81524e+06 1.01262e+08 1.45823e+07 24332 4.96344e+07 0 0.15742 0.986449 0.792397 9.98895e+07 0.00374777 2.12845e+07 1.73172e+07 2.15151e+07 336 2.14101e+07 1.49442e+07 0.00294156 2.16613e+07 50.2916 0.0179262 0.989151 0 50.2694 GTEX-1477Z-2226-SM-5QGPG 2 B1 2 pieces, hyperplastic glandular pattern; glandular epithelium with moderate-advanced autolysis 6.1 Prostate Prostate 0002367 729 883 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992096 149839 0.971252 0.993166 0.743385 23680 1 76 0.00193997 145 0 6.58217e+07 0.0284802 457484 6.62746e+07 4.32671e+06 23703 3.27609e+07 0 0.227867 0.993166 0.738305 6.58217e+07 0.00295285 1.44914e+07 7.94281e+06 1.46085e+07 156 1.45282e+07 9.84121e+06 0.00244586 1.46505e+07 50.2097 0.00690286 0.994235 0 50.2013 GTEX-1477Z-2826-SM-5SI9J 1 B1 1piece (fragmented), mainly adenohypophysis, ~5mm fragment of neurohypophysis 5.7 Pituitary Pituitary 0000007 785 827 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990575 425161 0.945338 0.992918 0.755697 24980 1 76 0.00199074 159 0 7.3889e+07 0.0544962 1.85798e+06 7.4416e+07 6.99896e+06 25012 3.67573e+07 0 0.189641 0.992918 0.750346 7.3889e+07 0.00320062 1.56804e+07 1.68988e+07 1.57694e+07 191 1.57346e+07 8.70392e+06 0.00259426 1.58867e+07 50.2406 0.0249675 0.995262 0 50.1415 GTEX-147F3-0002-SM-5DU5B B1 Blood Whole Blood 0013756 -36 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-147F3-0002-SM-6WSBE B1 Blood Whole Blood 0013756 -36 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-147F3-0005-SM-5N9FI B1 8.8 Blood Whole Blood 0013756 -36 BP-46087 RNA isolation_PAXgene Blood RNA (Manual) 11/22/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.980428 1.00383e+06 0.956753 0.982296 0.805557 19714 1 76 0.00435898 200 0 1.00159e+08 0.0425717 499485 1.01964e+08 5.52144e+06 19729 4.97675e+07 0 0.151197 0.982296 0.791295 1.00159e+08 0.00441103 2.20811e+07 8.08015e+07 2.23841e+07 212 2.243e+07 2.19405e+07 0.00438496 2.22348e+07 49.7814 0.00489864 0.984163 0 50.3408 GTEX-147F3-0126-SM-5NQBJ 1 B1 2 pieces; congestion 6.9 Spleen Spleen 0002106 72 323 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.985947 254879 0.96511 0.9899 0.802547 23998 1 76 0.00283977 164 0 7.62194e+07 0.0341356 584997 7.69971e+07 1.09775e+07 24023 3.78469e+07 0 0.162564 0.9899 0.794441 7.62194e+07 0.00582653 1.66415e+07 1.09037e+07 1.68394e+07 180 1.68593e+07 1.18205e+07 0.00432718 1.69066e+07 50.0701 0.00759765 0.993853 0 50.2956 GTEX-147F3-0226-SM-5NQBV 1 B1 2 pieces; skeletal muscle with 5% and 10% tendon, vessels and internal fat 8.3 Muscle Muscle - Skeletal 0011907 480 1355 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990067 138880 0.984625 0.992823 0.878173 19516 1 76 0.00230336 163 0 7.15226e+07 0.015179 856976 7.20396e+07 9.88424e+06 19523 3.56033e+07 0 0.106452 0.992823 0.87187 7.15226e+07 0.00507683 1.58941e+07 1.13784e+07 1.58232e+07 200 1.58027e+07 1.27837e+07 0.00368625 1.60858e+07 50.4439 0.0118959 0.995578 0 49.8882 GTEX-147F3-0426-SM-5SI8V 1 B1 2 pieces; 40-60% contaminating tissues, attached 3.2mm x 3.3mm portion of skeletal muscle on one piece, medial calcification (outlined), attached fat, vein, nerve, pacinian corpuscle 7.5 Blood Vessel Artery - Tibial 0007610 485 1350 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987884 216472 0.975325 0.992239 0.840515 22181 1 76 0.0018389 205 0 8.29463e+07 0.0242608 411345 8.35951e+07 8.81230e+06 22200 4.11844e+07 0 0.13481 0.992239 0.833992 8.29463e+07 0.00314143 1.78271e+07 6.86812e+06 1.79722e+07 207 1.8016e+07 1.63548e+07 0.00248731 1.81258e+07 50.1519 0.00492068 0.996592 0 50.2026 GTEX-147F3-0526-SM-5SI98 1 B1 6 pieces; up to 10% attached and internal fat; 41.67um thick epidermis 7 Skin Skin - Sun Exposed (Lower leg) 0004264 486 1349 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991882 185876 0.96927 0.99404 0.767146 24741 1 76 0.00202109 214 0 8.43224e+07 0.0305149 439955 8.4828e+07 7.89093e+06 24771 4.19797e+07 0 0.202124 0.99404 0.762574 8.43224e+07 0.00312697 1.83942e+07 8.82693e+06 1.85475e+07 204 1.85264e+07 1.35373e+07 0.00257283 1.85887e+07 50.0839 0.00518644 0.996197 0 50.2075 GTEX-147F3-0626-SM-5NQ9I 1 B1 2 pieces, fragmented; less than 10% fibrovascular component 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 486 1349 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990075 196968 0.975978 0.992882 0.821849 22682 1 76 0.00246974 206 0 8.26717e+07 0.0235939 553142 8.32643e+07 1.0185e+07 22706 4.11262e+07 0 0.15413 0.992882 0.815999 8.26717e+07 0.00523326 1.81262e+07 9.66304e+06 1.82014e+07 228 1.8191e+07 1.34604e+07 0.0038476 1.83497e+07 50.2172 0.00664321 0.995688 0 50.1035 GTEX-147F3-0726-SM-5NQ9U 1 B1 2 pieces; sloughing of bronchial epithelium; pleura covers one piece (outlined); congestion and atelectasis 8.3 Lung Lung 0008952 495 1340 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.99045 203869 0.972328 0.992902 0.787568 24012 1 76 0.00259828 166 0 7.64571e+07 0.0272614 379499 7.70037e+07 9.81529e+06 24050 3.80451e+07 0 0.184759 0.992902 0.781978 7.64571e+07 0.00514002 1.69173e+07 7.55212e+06 1.70205e+07 175 1.70153e+07 1.27356e+07 0.00386601 1.71007e+07 50.1252 0.00492832 0.995354 0 50.1521 GTEX-147F3-0826-SM-5NQA7 0 B1 5 pieces; several clusters of submucosal glands; squamous epithelium measures up to 339.5um 9.1 Esophagus Esophagus - Mucosa 0006920 500 1335 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990528 362627 0.972926 0.993058 0.818852 24019 1 76 0.00245924 284 0 1.06469e+08 0.0265553 479481 1.07213e+08 1.40684e+07 24047 5.29849e+07 0 0.154074 0.993058 0.813168 1.06469e+08 0.0052132 2.38318e+07 1.9562e+07 2.38569e+07 274 2.38768e+07 2.12119e+07 0.00383271 2.40712e+07 50.2027 0.00447223 0.995589 0 50.0264 GTEX-147F3-1526-SM-5SIAK 1 B1 6 pieces; epithelium is minimal to absent on three with significant skeletal muscle 5.9 Vagina Vagina 0000996 524 1311 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991047 194017 0.968426 0.992996 0.774015 23465 1 76 0.00201738 155 0 7.16461e+07 0.0312619 224031 7.21515e+07 6.75076e+06 23494 3.56568e+07 0 0.19441 0.992996 0.768594 7.16461e+07 0.00311749 1.56108e+07 7.09698e+06 1.57502e+07 166 1.57198e+07 1.16787e+07 0.00256636 1.57775e+07 50.0917 0.00310501 0.994946 0 50.2223 GTEX-147F3-1726-SM-5SIAW 1 B1 6 pieces; up to 50% external fat (subcutis) 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 530 1305 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991814 164082 0.973125 0.993873 0.791015 23726 1 76 0.00199721 182 0 7.33074e+07 0.0266395 416500 7.37594e+07 6.21659e+06 23752 3.64998e+07 0 0.18211 0.993873 0.786168 7.33074e+07 0.00292788 1.60914e+07 7.82590e+06 1.62043e+07 177 1.61765e+07 1.24854e+07 0.00246158 1.62644e+07 50.1354 0.00564674 0.995931 0 50.1748 GTEX-147F3-1926-SM-5SIB9 2 B1 6 pieces; fragments with variably autolyzed mucosa and muscularis 6.4 Colon Colon - Transverse 0001157 539 1296 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989889 207418 0.969573 0.992471 0.797662 23794 1 76 0.00237308 168 0 7.53065e+07 0.0295249 742081 7.58778e+07 7.93763e+06 23824 3.74486e+07 0 0.171911 0.992471 0.791656 7.53065e+07 0.003447 1.66426e+07 1.1587e+07 1.66723e+07 199 1.66791e+07 1.06923e+07 0.00290864 1.68128e+07 50.1997 0.00977994 0.995052 0 50.0446 GTEX-147F3-5001-SM-AN41M B1 Muscle Muscle - Skeletal 0011907 481 ChIP-Seq GTEX-147F4-0003-SM-5GYA1 B1 Blood Whole Blood 0013756 1005 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-147F4-0003-SM-6WSBG B1 Blood Whole Blood 0013756 1005 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-147F4-0006-SM-5O99T B1 7.3 Blood Whole Blood 0013756 1005 BP-46087 RNA isolation_PAXgene Blood RNA (Manual) 11/22/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.939832 329615 0.984996 0.942616 0.806224 16713 1 76 0.00207553 91 0 8.92895e+07 0.0130211 152006 9.47252e+07 1.38544e+07 16715 4.43564e+07 0 0.178771 0.942616 0.75996 8.92895e+07 0.00424467 2.15057e+07 1.83301e+08 2.14297e+07 131 2.13818e+07 2.58933e+07 0.0031569 2.18135e+07 50.4997 0.0016047 0.9454 0 49.9114 GTEX-147F4-0011-R10a-SM-AHZ7E B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1020 ChIP-Seq GTEX-147F4-0011-R10b-SM-5S2WC B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 1020 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991807 572378 0.956973 0.994035 0.834226 22823 1 76 0.00215641 268 0 7.62697e+07 0.0427109 4.20902e+06 7.67274e+07 7.92303e+06 22833 3.79727e+07 0 0.122747 0.994035 0.82925 7.62697e+07 0.00319746 1.66383e+07 2.27327e+07 1.65932e+07 269 1.65025e+07 7.9035e+06 0.00267577 1.68829e+07 50.5697 0.0548568 0.996262 0 49.9322 GTEX-147F4-0011-R10b-SM-CYKQO B1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 1020 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 RIP-Seq GTEX-147F4-0011-R6b-SM-5S2UP B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1020 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990079 1.61229e+06 0.934924 0.992676 0.837675 21504 1 76 0.00216995 371 0 8.45734e+07 0.06481 7.91779e+06 8.51973e+07 8.9095e+06 21517 4.2075e+07 0 0.0972493 0.992676 0.83154 8.45734e+07 0.00338186 1.80532e+07 5.3162e+07 1.80425e+07 340 1.78252e+07 8.56012e+06 0.00277432 1.85301e+07 50.9694 0.0929347 0.995274 0 49.9851 GTEX-147F4-0011-R8b-SM-5S2UN B1, A1 5.9 Brain Brain - Hypothalamus 0001898 1020 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993269 527613 0.95898 0.995083 0.831175 23082 1 76 0.00229292 267 0 8.66822e+07 0.0407983 6.23078e+06 8.71105e+07 8.02334e+06 23098 4.31844e+07 0 0.127805 0.995083 0.827088 8.66822e+07 0.00331984 1.89674e+07 3.06657e+07 1.8915e+07 318 1.87315e+07 6.93523e+06 0.00280544 1.92898e+07 50.7342 0.0715274 0.996898 0 49.9308 GTEX-147F4-0126-SM-5QGPV 0 B1 2 pieces, adherent nubbin of fibrous tissue up to ~1mm 7.2 Blood Vessel Artery - Tibial 0007610 1224 586 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992332 186253 0.972718 0.993799 0.80929 20902 1 76 0.00196492 129 0 5.96282e+07 0.0269644 224665 6.00003e+07 4.072e+06 20918 2.96759e+07 0 0.163428 0.993799 0.804271 5.96282e+07 0.00304276 1.28139e+07 4.74884e+06 1.29034e+07 143 1.28497e+07 1.06596e+07 0.00250304 1.29579e+07 50.2095 0.0037444 0.995265 0 50.1739 GTEX-147F4-0226-SM-5QGPW 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 1225 585 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99158 162451 0.969673 0.992926 0.760941 23241 1 76 0.0021163 131 0 5.80626e+07 0.030109 357933 5.84763e+07 4.32271e+06 23264 2.89195e+07 0 0.208732 0.992926 0.755558 5.80626e+07 0.00304302 1.26986e+07 6.66459e+06 1.28108e+07 133 1.2783e+07 9.11675e+06 0.00257903 1.28027e+07 50.0385 0.00612099 0.994272 0 50.22 GTEX-147F4-0326-SM-5TDCK 0 B1 2 pieces, ~10-15% interstitial fat, rep delineated 7.7 Muscle Muscle - Skeletal 0011907 1226 584 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987559 274829 0.983412 0.991849 0.883919 19709 1 76 0.00218516 197 0 8.7086e+07 0.0163092 969380 8.78016e+07 1.15405e+07 19717 4.32645e+07 0 0.0994936 0.991849 0.876714 8.7086e+07 0.00430407 1.87509e+07 1.09882e+07 1.88197e+07 217 1.89033e+07 1.88193e+07 0.00324003 1.90022e+07 50.1304 0.0110406 0.996139 0 50.0916 GTEX-147F4-0626-SM-5LUAK 1 B1 "2 pieces, spermatogenesis appears notabely reduced, approaching 'Sertoili only""" 6.1 Testis Testis 0000473 1251 559 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988717 320803 0.942836 0.991233 0.728704 30323 1 76 0.00478244 117 0 5.76999e+07 0.05695 1.0883e+06 5.82103e+07 5.18254e+06 30361 2.8669e+07 0 0.214133 0.991233 0.722315 5.76999e+07 0.00422914 1.22909e+07 7.83271e+06 1.2416e+07 123 1.24345e+07 7.6754e+06 0.0045065 1.24089e+07 49.9486 0.0186961 0.993749 0 50.2531 GTEX-147F4-0726-SM-5TDDD 0 B1 6 pieces. miinmal adherent dermal fat; squamous epithelium is ~30-40 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1254 556 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.982647 498693 0.961997 0.986261 0.759164 22808 1 76 0.00252436 149 0 6.89615e+07 0.0378233 737653 6.99222e+07 8.38031e+06 22837 3.42245e+07 0 0.202833 0.986261 0.748734 6.89615e+07 0.00476862 1.50226e+07 1.64052e+07 1.51718e+07 164 1.51466e+07 9.27826e+06 0.00364238 1.53059e+07 50.2616 0.0105496 0.989875 0 50.247 GTEX-147F4-0826-SM-5QGRB 1 B1 2 pieces, one section is ~30% adherent adjacent fat; delineated 6.3 Thyroid Thyroid 0002046 1255 555 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.988026 132035 0.9671 0.989487 0.765598 23582 1 76 0.00210172 134 0 6.56965e+07 0.0325973 247753 6.63944e+07 4.5831e+06 23608 3.26788e+07 0 0.201503 0.989487 0.757549 6.56965e+07 0.00306009 1.43748e+07 6.93357e+06 1.44748e+07 149 1.44318e+07 1.07536e+07 0.0025802 1.45165e+07 50.1463 0.00373153 0.990948 0 50.1732 GTEX-147F4-0926-SM-5Q5EO 1 B1 2 pieces patchy chronic, mildly active pneumonitis and atalectasis 7.5 Lung Lung 0008952 1258 552 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989736 176740 0.975639 0.992529 0.736548 23115 1 76 0.00241698 151 0 7.79941e+07 0.0240354 298387 7.85812e+07 1.02723e+07 23147 3.87705e+07 0 0.239091 0.992529 0.731045 7.79941e+07 0.00395003 1.72532e+07 7.22373e+06 1.73796e+07 166 1.73817e+07 1.19546e+07 0.00318135 1.74606e+07 50.1132 0.00379718 0.995322 0 50.1825 GTEX-147F4-0926-SM-CYKOU 1 B1 2 pieces patchy chronic, mildly active pneumonitis and atalectasis 7.5 Lung Lung 0008952 1258 552 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 RIP-Seq GTEX-147F4-1026-SM-5Q5F9 1 B1 6 pieces, no significant atherosis noted 6.2 Blood Vessel Artery - Aorta 0001496 1258 552 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987958 183325 0.969925 0.99028 0.757563 22549 1 76 0.00239448 150 0 7.39122e+07 0.0297226 236686 7.46377e+07 9.5602e+06 22578 3.67193e+07 0 0.212362 0.99028 0.750199 7.39122e+07 0.00391539 1.59391e+07 7.49798e+06 1.609e+07 165 1.60531e+07 1.16262e+07 0.00315315 1.61446e+07 50.1422 0.00317113 0.992602 0 50.2357 GTEX-147F4-1126-SM-5TDDE 1 B1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 1259 551 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986642 229901 0.974549 0.990956 0.799804 22295 1 76 0.00247493 139 0 6.82947e+07 0.0252522 2.31536e+06 6.8918e+07 9.15625e+06 22311 3.3889e+07 0 0.174745 0.990956 0.79257 6.82947e+07 0.00461191 1.46894e+07 7.11108e+06 1.47298e+07 166 1.47246e+07 9.37316e+06 0.00353877 1.49684e+07 50.4105 0.0335959 0.995269 0 50.0687 GTEX-147F4-1226-SM-5NQAY 1 B1 2 pieces, minimal interstitial fibrosis 6.5 Heart Heart - Left Ventricle 0006566 1261 549 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.986873 111658 0.987964 0.989896 0.849473 19042 1 76 0.00301426 264 0 8.53035e+07 0.011973 5.66333e+06 8.61742e+07 1.22717e+07 19048 4.24559e+07 0 0.138491 0.989896 0.84089 8.53035e+07 0.0058955 1.87438e+07 3.91135e+07 1.87685e+07 315 1.8652e+07 4.55268e+06 0.00445048 1.90403e+07 50.515 0.0657196 0.992919 0 50.0329 GTEX-147F4-1326-SM-5LU9V 1 B1 2 pieces, minimal atherosis; adherent fat up to~ 1mm, rep delineated 6.7 Blood Vessel Artery - Coronary 0001621 1265 545 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989001 192786 0.972399 0.991085 0.8212 21875 1 76 0.00454877 132 0 6.05447e+07 0.0272514 149822 6.10893e+07 4.74612e+06 21892 3.00832e+07 0 0.151199 0.991085 0.813879 6.05447e+07 0.00396765 1.28912e+07 6.06593e+06 1.29971e+07 138 1.29706e+07 1.13963e+07 0.00425882 1.30446e+07 50.1423 0.00245251 0.99317 0 50.2047 GTEX-147F4-1426-SM-5LUA8 1 B1 2 pieces, moderate passive congestion 7 Liver Liver 0001114 1268 542 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99177 228503 0.973119 0.993689 0.801371 20816 1 76 0.00471779 113 0 5.73553e+07 0.0267138 752878 5.77196e+07 4.75166e+06 20830 2.85331e+07 0 0.171749 0.993689 0.796313 5.73553e+07 0.00396257 1.25124e+07 8.62381e+06 1.26029e+07 132 1.2589e+07 8.20017e+06 0.00434091 1.26283e+07 50.0778 0.0130437 0.995607 0 50.1801 GTEX-147F4-2526-SM-5NQBB 2 B1 2 pieces, cortex, moderate-advanced autolysis 6.7 Adrenal Gland Adrenal Gland 0002369 1309 501 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988885 215792 0.972334 0.992216 0.806476 22188 1 76 0.00254952 272 0 9.28286e+07 0.02739 2.95944e+06 9.35569e+07 1.27735e+07 22211 4.61682e+07 0 0.165859 0.992216 0.800198 9.28286e+07 0.00524521 1.98656e+07 1.21518e+07 2.00299e+07 279 2.0057e+07 1.28072e+07 0.00389284 2.01123e+07 50.0689 0.0316326 0.995547 0 50.2059 GTEX-147F4-2626-SM-5Q5CS 2 B1 6 pieces, glomerulie present; tubules autolyzed 6.8 Kidney Kidney - Cortex 0001225 1311 499 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990035 166784 0.969894 0.992629 0.803641 25131 1 76 0.00240243 203 0 8.25626e+07 0.0297581 1.51180e+06 8.31757e+07 1.06775e+07 25163 4.10661e+07 0 0.166253 0.992629 0.797718 8.25626e+07 0.00392723 1.82234e+07 8.91915e+06 1.82918e+07 222 1.82792e+07 1.19964e+07 0.00316284 1.84362e+07 50.2138 0.018176 0.995223 0 50.0937 GTEX-147F4-2826-SM-5NQBN 1 B1 2 pieces, gynecomastoid stromal hyperplasia2 7.3 Breast Breast - Mammary Tissue 0008367 1316 494 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988356 199768 0.972799 0.991439 0.761958 24330 1 76 0.00260668 145 0 7.23562e+07 0.0268409 318017 7.29809e+07 9.91923e+06 24366 3.59708e+07 0 0.210841 0.991439 0.755435 7.23562e+07 0.00528616 1.59307e+07 7.94809e+06 1.60354e+07 154 1.60677e+07 1.19810e+07 0.00394225 1.6112e+07 50.0688 0.00435754 0.994522 0 50.1638 GTEX-147F4-3026-SM-5Q5BJ 1 B1 2 pieces, no abnormalities 6.5 Brain Brain - Cerebellum 0002037 1357 453 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989753 494586 0.93613 0.992081 0.737715 23298 1 76 0.00211099 154 0 7.51248e+07 0.0635817 1.49651e+06 7.57245e+07 5.18753e+06 23326 3.7363e+07 0 0.198415 0.992081 0.731872 7.51248e+07 0.00317163 1.59953e+07 2.27003e+07 1.6127e+07 195 1.61015e+07 7.77241e+06 0.00264007 1.61871e+07 50.1326 0.0197626 0.994408 0 50.2051 GTEX-147F4-3126-SM-5TDDF 1 B1 2 pieces, ~30% neurohypophysis, delineated, rest adenohypophysis 7.4 Pituitary Pituitary 0000007 1356 454 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.9891 352039 0.961986 0.992117 0.748545 25765 1 76 0.00245813 272 0 9.72969e+07 0.0377448 362511 9.807e+07 1.30382e+07 25816 4.83774e+07 0 0.213441 0.992117 0.742644 9.72969e+07 0.00409702 2.11715e+07 1.34014e+07 2.13223e+07 256 2.14034e+07 1.5233e+07 0.00327508 2.13729e+07 49.9644 0.00369645 0.995134 0 50.1775 GTEX-147GR-0003-SM-5DU4P B1 Blood Whole Blood 0013756 868 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-147GR-0003-SM-6WSBC B1 Blood Whole Blood 0013756 868 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-6066 09/29/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-147GR-0005-SM-5NQAO B1 8.1 Blood Whole Blood 0013756 868 BP-46087 RNA isolation_PAXgene Blood RNA (Manual) 11/22/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.970534 300223 0.980313 0.973554 0.806428 18715 1 76 0.00281935 98 0 7.33514e+07 0.0179544 399645 7.5344e+07 1.11427e+07 18723 3.64121e+07 0 0.173885 0.973554 0.785101 7.33514e+07 0.00615886 1.70145e+07 9.00043e+07 1.71298e+07 124 1.71224e+07 1.76805e+07 0.00448392 1.72579e+07 50.1971 0.00530427 0.976574 0 50.169 GTEX-147GR-0011-R10a-SM-AHZ6Y B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 872 ChIP-Seq GTEX-147GR-0011-R10b-SM-5S2UM B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 872 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992754 846607 0.95557 0.994483 0.847283 23517 1 76 0.00202746 372 0 9.63179e+07 0.0440552 4.44876e+06 9.68522e+07 9.27851e+06 23534 4.79719e+07 0 0.108288 0.994483 0.842609 9.63179e+07 0.00299479 2.09656e+07 2.6426e+07 2.10778e+07 338 2.0955e+07 1.17045e+07 0.00251028 2.1256e+07 50.3565 0.0459335 0.996213 0 50.1335 GTEX-147GR-0011-R10b-SM-CYKQJ B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 872 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 RIP-Seq GTEX-147GR-0011-R2b-SM-5S2RQ B1, A1 6.9 Brain Brain - Substantia nigra 0002038 872 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991875 257537 0.961622 0.993157 0.836872 21949 1 76 0.00205799 156 0 5.7041e+07 0.0382182 4.57234e+06 5.7434e+07 3.26809e+06 21957 2.84061e+07 0 0.12475 0.993157 0.831145 5.7041e+07 0.0029105 1.25013e+07 1.12821e+07 1.28082e+07 180 1.25521e+07 5.06497e+06 0.00248369 1.28211e+07 50.5301 0.0796103 0.994438 0 50.6063 GTEX-147GR-0011-R4a-SM-5S2V2 B1, A1 6.2 Brain Brain - Amygdala 0001876 872 BP-48171 RNA isolation_PAXgene Tissue miRNA 01/10/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990252 1.9128e+06 0.919862 0.992504 0.823211 21975 1 76 0.00216535 373 0 8.67163e+07 0.0798705 8.87868e+06 8.73712e+07 7.98939e+06 21987 4.31501e+07 0 0.0966511 0.992504 0.81704 8.67163e+07 0.0034312 1.8275e+07 6.3755e+07 1.84458e+07 356 1.81334e+07 8.32186e+06 0.00279683 1.88336e+07 50.9469 0.10162 0.994757 0 50.2326 GTEX-147GR-0011-R6b-SM-5S2RO B1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 872 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991968 390097 0.95382 0.993534 0.818348 22574 1 76 0.00200502 128 0 5.59459e+07 0.04593 3.16868e+06 5.631e+07 3.29128e+06 22587 2.78618e+07 0 0.135472 0.993534 0.813057 5.59459e+07 0.00274167 1.20656e+07 1.43101e+07 1.23762e+07 158 1.22981e+07 5.96741e+06 0.00237277 1.22239e+07 49.8486 0.056272 0.995101 0 50.6355 GTEX-147GR-0011-R7a-SM-5S2RP B1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 872 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99082 752307 0.9453 0.992197 0.813077 21375 1 76 0.00218142 152 0 5.80692e+07 0.0545197 4.94608e+06 5.85259e+07 3.38262e+06 21383 2.89171e+07 0 0.132223 0.992197 0.806733 5.80692e+07 0.00298587 1.23608e+07 2.89067e+07 1.2765e+07 179 1.25469e+07 4.43624e+06 0.00258309 1.26496e+07 50.2038 0.0845111 0.993573 0 50.8044 GTEX-147GR-0011-R9a-SM-5S2UY B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 872 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991417 384188 0.958402 0.993752 0.809293 22843 1 76 0.00193918 179 0 6.83522e+07 0.0412727 1.68384e+06 6.8782e+07 6.90719e+06 22862 3.40136e+07 0 0.149109 0.993752 0.804237 6.83522e+07 0.00322909 1.50699e+07 1.08153e+07 1.53241e+07 186 1.52023e+07 9.36686e+06 0.00258262 1.53499e+07 50.2417 0.0244808 0.996087 0 50.4181 GTEX-147GR-0126-SM-62LER 0 B1 2 partially fragmented pieces; <5% internal fat 9.6 Muscle Muscle - Skeletal 0011907 985 885 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989725 222174 0.984282 0.993244 0.878659 19320 1 76 0.00271826 267 0 9.54072e+07 0.0155497 1.90275e+06 9.60561e+07 6.73454e+06 19327 4.74615e+07 0 0.105622 0.993244 0.872723 9.54072e+07 0.00328159 2.08349e+07 1.5812e+07 2.10254e+07 277 2.08947e+07 1.63833e+07 0.00299893 2.12547e+07 50.4271 0.0198087 0.996764 0 50.2276 GTEX-147GR-0426-SM-5S2OL 0 B1 2 pieces; <5% fibrous content 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 994 876 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.989139 115895 0.977558 0.991321 0.86 21496 1 76 0.00194326 139 0 5.74765e+07 0.0221345 466276 5.79796e+07 4.35843e+06 21507 2.858e+07 0 0.117558 0.991321 0.852537 5.74765e+07 0.00291436 1.25876e+07 6.06479e+06 1.27535e+07 150 1.26823e+07 1.07591e+07 0.00242774 1.27865e+07 50.2046 0.00804206 0.993504 0 50.3273 GTEX-147GR-0526-SM-5S2MY 0 B1 6 pieces; well trimmed; 20% dermal fat 7 Skin Skin - Sun Exposed (Lower leg) 0004264 999 871 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990457 187494 0.969234 0.99215 0.766959 24116 1 76 0.00198697 163 0 7.47925e+07 0.0305206 378339 7.53842e+07 4.96108e+06 24147 3.72089e+07 0 0.202276 0.99215 0.760938 7.47925e+07 0.00276663 1.63126e+07 7.37834e+06 1.64448e+07 173 1.63689e+07 1.19532e+07 0.00237614 1.65131e+07 50.2192 0.00501881 0.993844 0 50.2018 GTEX-147GR-0626-SM-5S2PK 1 B1 2 pieces; moderately reduced spermatogenesis; moderately increased interstitial fibrosis 6.9 Testis Testis 0000473 1102 768 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.991513 261873 0.94145 0.992874 0.723609 32463 1 76 0.00187854 166 0 8.01823e+07 0.0582502 795924 8.07578e+07 4.13099e+06 32517 3.99087e+07 0 0.21784 0.992874 0.718453 8.01823e+07 0.00271963 1.69893e+07 9.15375e+06 1.71619e+07 171 1.7138e+07 1.24718e+07 0.00229851 1.71132e+07 49.9637 0.00985569 0.994234 0 50.2527 GTEX-147GR-0726-SM-5S2PL 2 B1 2 pieces; well trimmed 5.9 Thyroid Thyroid 0002046 1115 755 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99172 176952 0.964055 0.99264 0.752093 23322 1 76 0.00196605 121 0 5.55764e+07 0.0356611 233300 5.59884e+07 3.04676e+06 23348 2.76753e+07 0 0.211962 0.99264 0.746558 5.55764e+07 0.00273975 1.21183e+07 6.70132e+06 1.22671e+07 130 1.22265e+07 8.21455e+06 0.00235255 1.2214e+07 49.9743 0.00416693 0.993561 0 50.3052 GTEX-147GR-1226-SM-5TDCL 2 B1 2 pieces; emphysema, fibrosis, edema, hemorrhage, pigmented macrophages 7.7 Lung Lung 0008952 1151 719 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988949 193167 0.972707 0.991816 0.770487 24173 1 76 0.00273105 136 0 7.42297e+07 0.0266932 253393 7.48422e+07 8.89496e+06 24210 3.68938e+07 0 0.20222 0.991816 0.764181 7.42297e+07 0.00437358 1.64496e+07 7.80246e+06 1.66005e+07 161 1.66084e+07 1.22733e+07 0.00354994 1.66486e+07 50.0605 0.0033857 0.994683 0 50.2283 GTEX-147GR-1226-SM-CYKOA 2 B1 2 pieces; emphysema, fibrosis, edema, hemorrhage, pigmented macrophages 7.7 Lung Lung 0008952 1151 719 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-147GR-1326-SM-7IGLB 1 B1 2 pieces: moderate central congestion 6.1 Liver Liver 0001114 1160 710 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.988014 188123 0.968388 0.988993 0.818027 24151 1 76 0.00236212 151 0 6.45801e+07 0.0314005 1.50058e+06 6.52988e+07 3.72804e+06 24172 3.21937e+07 0 0.150361 0.988993 0.809023 6.45801e+07 0.00325467 1.40118e+07 1.00292e+07 1.42949e+07 182 1.42053e+07 6.91969e+06 0.00280795 1.4155e+07 49.9114 0.0229803 0.989973 0 50.5001 GTEX-147GR-2426-SM-5ZZWQ 1 B1 6 pieces; well trimmed; <5% dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1230 640 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993145 159734 0.974013 0.994634 0.818394 22568 1 76 0.00214853 164 0 6.90451e+07 0.0257658 561162 6.94176e+07 6.34661e+06 22591 3.44057e+07 0 0.155619 0.994634 0.814003 6.90451e+07 0.00337276 1.51466e+07 7.97406e+06 1.52173e+07 167 1.51733e+07 1.17055e+07 0.00275973 1.52932e+07 50.1969 0.00808386 0.996124 0 50.1164 GTEX-147GR-2726-SM-664OO 1 B1 6 pieces; well dissected 6.9 Colon Colon - Transverse 0001157 1257 613 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.98887 178084 0.970434 0.989587 0.798751 24689 1 76 0.00325888 273 0 9.40257e+07 0.0259711 1.96007e+06 9.5015e+07 5.96868e+06 24735 4.66376e+07 0 0.171683 0.989587 0.790434 9.40257e+07 0.00402697 2.09382e+07 1.40192e+07 2.11232e+07 291 2.09811e+07 1.30823e+07 0.00364265 2.11405e+07 50.1893 0.020629 0.990305 0 50.2198 GTEX-147GR-2826-SM-5RQK8 1 B1 6 pieces; muscle plus up to 1 mm fat 5.8 Colon Colon - Sigmoid 0001159 1268 602 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.984889 130520 0.968297 0.985832 0.79563 23191 1 76 0.0023849 150 0 6.65168e+07 0.0314569 1.10088e+06 6.74728e+07 3.64295e+06 23215 3.30452e+07 0 0.172667 0.985832 0.784357 6.65168e+07 0.00326637 1.4438e+07 6.9511e+06 1.45223e+07 166 1.44802e+07 9.82427e+06 0.00282522 1.45445e+07 50.1107 0.0163159 0.986774 0 50.1454 GTEX-147GR-2926-SM-5RQIN 2 B1 1 piece; 80% anterior, 20% neurohypophysis 7.3 Pituitary Pituitary 0000007 1308 562 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992768 144409 0.963626 0.993589 0.76472 24231 1 76 0.00217214 112 0 5.52992e+07 0.0360958 259575 5.5656e+07 2.72781e+06 24256 2.75389e+07 0 0.198906 0.993589 0.759817 5.52992e+07 0.00296333 1.10468e+07 5.46527e+06 1.11481e+07 122 1.11391e+07 9.5896e+06 0.00256741 1.10984e+07 49.9085 0.00466392 0.99441 0 50.2282 GTEX-147GR-3026-SM-5S2ML 1 B1 3 pieces 6.1 Brain Brain - Cortex 0001870 1310 560 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993054 259051 0.965815 0.994731 0.83664 22500 1 76 0.00205808 264 0 7.38564e+07 0.0339513 5.86978e+06 7.42476e+07 5.50265e+06 22511 3.676e+07 0 0.129175 0.994731 0.832232 7.38564e+07 0.00298174 1.59925e+07 1.89937e+07 1.65419e+07 259 1.62675e+07 6.70332e+06 0.00251913 1.63589e+07 50.1401 0.0790569 0.996407 0 50.8444 GTEX-147GR-3126-SM-5S2PM 1 B1 2 pieces 6.7 Brain Brain - Cerebellum 0002037 1313 557 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.991009 907481 0.917636 0.992278 0.680773 23936 1 76 0.00201068 156 0 7.82379e+07 0.0820241 1.31394e+06 7.88468e+07 3.86477e+06 23957 3.89243e+07 0 0.236863 0.992278 0.675516 7.82379e+07 0.00279242 1.62849e+07 3.81989e+07 1.66772e+07 182 1.66255e+07 8.21626e+06 0.00240105 1.64552e+07 49.7425 0.0166645 0.993547 0 50.5951 GTEX-147JS-0003-SM-5DU46 C1 Blood Whole Blood 0013756 404 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-147JS-0003-SM-7DRO2 C1 Blood Whole Blood 0013756 404 BP-46094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/22/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-147JS-0006-SM-5NQ7K C1 8.6 Blood Whole Blood 0013756 404 BP-46087 RNA isolation_PAXgene Blood RNA (Manual) 11/22/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.977232 285414 0.97952 0.97848 0.782896 18847 1 76 0.00237803 103 0 7.41803e+07 0.019628 183661 7.58118e+07 6.01609e+06 18856 3.6957e+07 0 0.196624 0.97848 0.766048 7.41803e+07 0.00332204 1.72628e+07 8.86333e+07 1.72664e+07 132 1.72772e+07 1.76677e+07 0.00284943 1.7353e+07 50.1094 0.00242259 0.979728 0 50.0052 GTEX-147JS-0126-SM-5S2TW 1 C1 2 pieces, spermatogenesis is present 5.8 Testis Testis 0000473 465 923 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991634 243171 0.931933 0.993245 0.72976 33696 1 76 0.00208223 280 0 9.81334e+07 0.067749 1.0731e+06 9.88009e+07 9.34272e+06 33764 4.88873e+07 0 0.202172 0.993245 0.724831 9.81334e+07 0.00289955 2.05853e+07 1.36777e+07 2.06438e+07 260 2.06528e+07 1.52678e+07 0.00249023 2.07158e+07 50.0762 0.0108612 0.994856 0 50.0709 GTEX-147JS-0226-SM-5S2U9 0 C1 6 pieces, minimal dermal fat, sqauamous epithelium is ~ microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 467 921 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.985862 199275 0.970518 0.988252 0.746708 24517 1 76 0.0021156 205 0 8.87986e+07 0.0291014 385846 8.98542e+07 8.23168e+06 24567 4.4147e+07 0 0.22381 0.988252 0.737936 8.87986e+07 0.00323574 1.95557e+07 9.58419e+06 1.96534e+07 209 1.96262e+07 1.34705e+07 0.00267432 1.97941e+07 50.213 0.00429414 0.990643 0 50.1245 GTEX-147JS-0426-SM-5TDD2 0 C1 2 pieces fascia is ~10-15% , rep delineated 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 507 882 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987199 225198 0.97148 0.990707 0.791686 23928 1 76 0.00238739 160 0 7.31053e+07 0.028192 533939 7.3791e+07 9.16127e+06 23954 3.63035e+07 0 0.179794 0.990707 0.784329 7.31053e+07 0.00444091 1.59978e+07 7.37289e+06 1.61127e+07 173 1.61175e+07 1.16131e+07 0.00341052 1.62415e+07 50.1916 0.00723582 0.994216 0 50.1789 GTEX-147JS-0526-SM-5TDD3 0 C1 2 pieces, interstitial fat/vascular elements are ~10%, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 510 880 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989868 241188 0.98087 0.993091 0.868493 20619 1 76 0.00211534 129 0 7.30468e+07 0.018867 774351 7.3555e+07 9.24934e+06 20629 3.63262e+07 0 0.112377 0.993091 0.862493 7.30468e+07 0.00406255 1.58426e+07 7.17858e+06 1.59216e+07 157 1.59305e+07 1.60074e+07 0.00308578 1.60558e+07 50.1958 0.0105275 0.996314 0 50.1245 GTEX-147JS-0626-SM-5TDD4 0 C1 2 pieces, good clean sections; trace rim of fat, ~0.4mm 7 Nerve Nerve - Tibial 0001323 515 875 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986134 185708 0.968097 0.989421 0.775947 24371 1 76 0.0023524 155 0 6.82541e+07 0.0315951 235972 6.89839e+07 8.42967e+06 24399 3.38932e+07 0 0.19215 0.989421 0.767738 6.82541e+07 0.00445173 1.49398e+07 6.92101e+06 1.50719e+07 155 1.50606e+07 1.13057e+07 0.00339858 1.51724e+07 50.1848 0.00342068 0.992709 0 50.22 GTEX-147JS-0726-SM-5S2UL 0 C1 2 pieces, no atherosis, clean specimens 7.1 Blood Vessel Artery - Tibial 0007610 516 875 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991424 229524 0.973595 0.993606 0.813 22088 1 76 0.00198351 167 0 7.61707e+07 0.0259688 295348 7.66609e+07 7.6577e+06 22110 3.79013e+07 0 0.160595 0.993606 0.807801 7.61707e+07 0.00322214 1.63043e+07 6.34318e+06 1.64607e+07 174 1.64508e+07 1.4748e+07 0.00260147 1.64708e+07 50.0304 0.00385265 0.995788 0 50.2387 GTEX-147JS-1026-SM-5S2MP 1 C1 2 pieces, ~5-10% fascia; rep delineated 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 546 846 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991349 174765 0.976083 0.992927 0.792792 22754 1 76 0.00193061 149 0 6.71904e+07 0.0235763 408045 6.7669e+07 4.72868e+06 22777 3.34164e+07 0 0.183291 0.992927 0.787185 6.71904e+07 0.002845 1.4766e+07 8.06522e+06 1.49459e+07 167 1.48663e+07 1.06932e+07 0.00238708 1.49568e+07 50.1516 0.00603001 0.994505 0 50.3026 GTEX-147JS-1126-SM-5RQIW 1 C1 2 pieces, mild congestion; ~10% macrovesicular parenchymal fat 6.2 Liver Liver 0001114 547 846 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990328 164703 0.974544 0.991112 0.833636 20621 1 76 0.00233043 129 0 6.25472e+07 0.025296 1.20708e+06 6.31082e+07 3.12134e+06 20634 3.11317e+07 0 0.140909 0.991112 0.826226 6.25472e+07 0.00315324 1.35979e+07 8.81035e+06 1.3727e+07 156 1.36583e+07 9.82901e+06 0.00274151 1.37142e+07 50.1021 0.0191271 0.991895 0 50.2364 GTEX-147JS-1226-SM-5RQK4 1 C1 2 pieces, patchy mild congestion, focal chronic pneumonitis 6.7 Lung Lung 0008952 549 844 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991728 168685 0.975766 0.992653 0.770802 22583 1 76 0.00237023 125 0 6.25062e+07 0.0238649 236223 6.29688e+07 3.28444e+06 22604 3.11087e+07 0 0.204964 0.992653 0.76514 6.25062e+07 0.00312028 1.37932e+07 5.2499e+06 1.392e+07 144 1.38992e+07 9.84407e+06 0.00274491 1.38722e+07 49.9513 0.00375143 0.993579 0 50.2287 GTEX-147JS-1326-SM-5SI6D 1 C1 pieces 6.8 Heart Heart - Atrial Appendage 0006631 550 844 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991026 299693 0.97406 0.993688 0.799934 23713 1 76 0.00197731 270 0 1.01848e+08 0.0256205 1.55779e+06 1.02495e+08 9.54053e+06 23744 5.0681e+07 0 0.174125 0.993688 0.794885 1.01848e+08 0.0031588 2.19757e+07 1.20808e+07 2.20084e+07 290 2.20447e+07 1.82585e+07 0.00256647 2.21948e+07 50.1696 0.0151987 0.996349 0 50.0371 GTEX-147JS-1526-SM-5ZZWF 1 C1 2 piecesm moderate chronic ischemic changes/fibrosis, subacute cellular ischemic changes 6.3 Heart Heart - Left Ventricle 0006566 556 839 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993965 158027 0.984174 0.995351 0.853886 19058 1 76 0.00240221 261 0 7.2469e+07 0.015746 5.50641e+06 7.28075e+07 6.34608e+06 19062 3.61268e+07 0 0.130288 0.995351 0.849917 7.2469e+07 0.00360534 1.59955e+07 2.64235e+07 1.60664e+07 291 1.58363e+07 4.4966e+06 0.00300293 1.63011e+07 50.7231 0.0756298 0.996738 0 50.1105 GTEX-147JS-1826-SM-5ZZWG 1 C1 6 pieces, target muscularis 5.8 Esophagus Esophagus - Muscularis 0004648 560 836 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992618 187690 0.970765 0.993992 0.806098 22838 1 76 0.00227743 266 0 8.88333e+07 0.0290654 2.20928e+06 8.93703e+07 8.06871e+06 22865 4.42504e+07 0 0.164667 0.993992 0.801255 8.88333e+07 0.00353762 1.94421e+07 9.58189e+06 1.95711e+07 315 1.94468e+07 9.51696e+06 0.00290665 1.96824e+07 50.3011 0.0247206 0.995366 0 50.1653 GTEX-147JS-2526-SM-5S2Q8 3 C1 6 pieces, glandular mucosa badly preserved, ~0.25mm thick 6.2 Colon Colon - Transverse 0001157 575 825 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.989161 143374 0.966213 0.990201 0.787371 24184 1 76 0.00247447 150 0 6.9323e+07 0.0312364 492287 7.0009e+07 4.2353e+06 24205 3.44187e+07 0 0.178842 0.990201 0.779656 6.9323e+07 0.00325703 1.49861e+07 8.87902e+06 1.5176e+07 168 1.51267e+07 1.02129e+07 0.00286534 1.5111e+07 49.9741 0.00703177 0.991242 0 50.3147 GTEX-147JS-2626-SM-5S2UX 1 C1 6 pieces, target muscularis 5.8 Colon Colon - Sigmoid 0001159 577 824 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991732 202220 0.970328 0.993672 0.790823 22808 1 76 0.00205496 140 0 7.02754e+07 0.0294136 659842 7.07229e+07 7.3011e+06 22833 3.49822e+07 0 0.179505 0.993672 0.785819 7.02754e+07 0.00318131 1.50985e+07 6.68309e+06 1.5253e+07 164 1.52153e+07 1.12445e+07 0.00261704 1.52652e+07 50.0819 0.00932996 0.995612 0 50.2545 GTEX-147JS-2826-SM-5YYA7 1 C1 2 pieces, hyperplastic glandular pattern (rep encircled), focal chronic prostatitis 6.1 Prostate Prostate 0002367 582 820 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.988258 203417 0.965789 0.989954 0.779022 25088 1 76 0.0028748 202 0 8.80055e+07 0.03398 1.77931e+06 8.88986e+07 3.98858e+06 25125 4.37476e+07 0 0.186767 0.989954 0.771196 8.80055e+07 0.00373281 1.94163e+07 1.06682e+07 1.95375e+07 239 1.94941e+07 1.03207e+07 0.00330307 1.96081e+07 50.1458 0.0200151 0.99165 0 50.1555 GTEX-148VI-0002-SM-5GYBT B1 Blood Whole Blood 0013756 211 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-148VI-0002-SM-7DROU B1 Blood Whole Blood 0013756 211 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-148VI-0006-SM-5O9A6 B1 7.4 Blood Whole Blood 0013756 211 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.930618 607265 0.966049 0.935903 0.783082 16845 1 76 0.00232799 81 0 7.68837e+07 0.0317306 29552 8.21493e+07 1.13475e+07 16849 3.80561e+07 0 0.182967 0.935903 0.732889 7.68837e+07 0.00546852 1.79578e+07 1.86419e+08 1.79996e+07 112 1.80256e+07 2.1511e+07 0.00388939 1.83918e+07 50.5028 0.000359735 0.941187 0 50.0582 GTEX-148VI-0226-SM-5RQKA 0 B1 2 pieces; emphysematous change, several large vessels, bronchi and cartilage; focus of hemorrhage 7.6 Lung Lung 0008952 237 1218 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992359 169619 0.968969 0.993151 0.748076 24096 1 76 0.00235077 120 0 6.20834e+07 0.0306342 212991 6.25115e+07 2.96118e+06 24123 3.09172e+07 0 0.220893 0.993151 0.742953 6.20834e+07 0.00300113 1.36579e+07 5.59856e+06 1.37677e+07 137 1.37559e+07 9.93283e+06 0.00267569 1.37174e+07 49.9298 0.00340723 0.993944 0 50.2002 GTEX-148VI-0326-SM-5RQK7 1 B1 2 pieces; some interstitial fibrosis and myocyte hypertrophy 6 Heart Heart - Left Ventricle 0006566 244 1211 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992956 161065 0.978672 0.994109 0.825485 19802 1 76 0.00198799 148 0 6.22122e+07 0.02123 2.24316e+06 6.25809e+07 3.1168e+06 19811 3.10009e+07 0 0.153187 0.994109 0.820623 6.22122e+07 0.00280526 1.37347e+07 1.60567e+07 1.38351e+07 191 1.37709e+07 6.23526e+06 0.00239615 1.38634e+07 50.1674 0.0358442 0.995263 0 50.1821 GTEX-148VI-0526-SM-5TDDG 0 B1 2 pieces 6.2 Thyroid Thyroid 0002046 251 1204 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.984092 344956 0.962623 0.989318 0.712844 24561 1 76 0.00239871 139 0 7.63793e+07 0.0371348 379056 7.7204e+07 9.05718e+06 24600 3.78618e+07 0 0.249779 0.989318 0.705229 7.63793e+07 0.00462448 1.65129e+07 8.05881e+06 1.66108e+07 165 1.66818e+07 1.02146e+07 0.00350572 1.68174e+07 50.2024 0.0049098 0.994543 0 50.1478 GTEX-148VI-0626-SM-5TDDH 0 B1 2 pieces; one piece includes capsule (target is 1cm below capsule), one includes larger vessel/duct (to be avoided) 6.6 Liver Liver 0001114 252 1203 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.983179 313421 0.978433 0.987353 0.848894 21251 1 76 0.00228001 159 0 7.52295e+07 0.0207228 534736 7.61931e+07 9.13834e+06 21268 3.73285e+07 0 0.129539 0.987353 0.838158 7.52295e+07 0.00425505 1.65059e+07 1.12921e+07 1.6529e+07 187 1.6564e+07 1.34592e+07 0.00326336 1.67651e+07 50.3018 0.00701817 0.991527 0 50.0349 GTEX-148VI-0826-SM-5TDDI 1 B1 2 pieces; well preserved, islets well visualized, small portion internal fat 6.6 Pancreas Pancreas 0001150 257 1198 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98899 298687 0.973588 0.99237 0.820615 21541 1 76 0.00250731 101 0 8.15031e+07 0.026123 187520 8.21297e+07 9.43755e+06 21558 4.05076e+07 0 0.152973 0.99237 0.814353 8.15031e+07 0.0045277 1.86073e+07 2.78318e+07 1.88541e+07 118 1.88064e+07 2.35599e+07 0.00351406 1.8936e+07 50.1717 0.00228322 0.99575 0 50.3294 GTEX-148VI-1026-SM-5TDDJ 1 B1 6 pieces; few fragments of muscularis (not target) 7.5 Esophagus Esophagus - Mucosa 0006920 274 1181 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986658 256058 0.975304 0.990605 0.805254 23123 1 76 0.00235593 160 0 7.90291e+07 0.0243672 188583 7.97786e+07 1.09781e+07 23147 3.92549e+07 0 0.17005 0.990605 0.797689 7.90291e+07 0.00403261 1.7824e+07 1.25675e+07 1.78168e+07 170 1.78912e+07 1.5746e+07 0.00319093 1.80592e+07 50.2337 0.00236383 0.994552 0 49.9899 GTEX-148VI-1126-SM-5S2QW 0 B1 6 pieces; well trimmed 6.8 Esophagus Esophagus - Muscularis 0004648 281 1174 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.992369 221732 0.97388 0.99399 0.829993 21940 1 76 0.00171382 167 0 7.717e+07 0.0258538 484010 7.76366e+07 3.92926e+06 21961 3.84007e+07 0 0.143887 0.99399 0.825005 7.717e+07 0.00261983 1.64145e+07 6.68488e+06 1.66491e+07 193 1.65673e+07 1.38596e+07 0.00216609 1.6618e+07 50.0764 0.0062343 0.995611 0 50.3547 GTEX-148VI-1226-SM-5RQJR 0 B1 6 pieces; well trimmed 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 286 1169 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992627 138419 0.967925 0.99336 0.767958 22298 1 76 0.00216693 121 0 5.82001e+07 0.0318453 335141 5.85891e+07 2.59121e+06 22320 2.8981e+07 0 0.199967 0.99336 0.762859 5.82001e+07 0.00283421 1.25471e+07 4.80397e+06 1.26843e+07 135 1.26445e+07 8.90891e+06 0.00250032 1.26282e+07 49.9678 0.00572019 0.994093 0 50.2719 GTEX-148VI-1626-SM-5SI6E 1 B1 6 pieces; well trimmed, <10% internal fat, epidermis measures 34 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 417 1038 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.99037 210149 0.972641 0.99322 0.789817 23423 1 76 0.00203747 196 0 7.37773e+07 0.0270959 340376 7.42809e+07 6.34684e+06 23449 3.66958e+07 0 0.182824 0.99322 0.784461 7.37773e+07 0.00334341 1.60509e+07 7.75764e+06 1.61679e+07 173 1.6176e+07 1.29016e+07 0.00268857 1.62449e+07 50.1063 0.00458228 0.996069 0 50.1816 GTEX-148VI-1726-SM-5S2W9 1 B1 2 pieces; large central defects (?poor fixation), portion of large vessel in 1 piece 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 420 1035 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990452 207643 0.972449 0.993043 0.792955 23050 1 76 0.0020122 209 0 8.17944e+07 0.0272353 471028 8.23675e+07 8.30253e+06 23081 4.06938e+07 0 0.179493 0.993043 0.787439 8.17944e+07 0.00293059 1.78883e+07 8.46596e+06 1.79307e+07 211 1.79289e+07 1.36226e+07 0.0024702 1.80914e+07 50.2256 0.00571862 0.995633 0 50.0593 GTEX-148VI-5004-SM-AN41P B1 Heart Heart - Left Ventricle 0006566 247 ChIP-Seq GTEX-148VJ-0002-SM-5DU4I B1 Blood Whole Blood 0013756 850 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-148VJ-0002-SM-7DRO4 B1 Blood Whole Blood 0013756 850 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-148VJ-0006-SM-5NQB1 B1 8 Blood Whole Blood 0013756 850 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.970835 485416 0.973215 0.974768 0.774577 19150 1 76 0.00255216 101 0 8.2053e+07 0.0251806 200740 8.4177e+07 1.18326e+07 19164 4.07129e+07 0 0.198638 0.974768 0.755033 8.2053e+07 0.00574525 1.88087e+07 9.93137e+07 1.90347e+07 135 1.90574e+07 1.93725e+07 0.00414227 1.91269e+07 50.091 0.00238474 0.978701 0 50.2987 GTEX-148VJ-0011-R10a-SM-AHZ6U B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 903 ChIP-Seq GTEX-148VJ-0011-R3b-SM-69LQJ B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 903 BP-50015 RNA isolation_PAXgene Tissue miRNA 02/28/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993052 637379 0.961845 0.994447 0.826455 21233 1 76 0.00236103 367 0 8.03457e+07 0.0379951 6.74262e+06 8.07943e+07 4.43526e+06 21244 4.00345e+07 0 0.13539 0.994447 0.821866 8.03457e+07 0.00320423 1.72408e+07 4.16222e+07 1.74889e+07 337 1.70428e+07 5.17089e+06 0.00278204 1.77692e+07 51.0433 0.0834542 0.995842 0 50.3573 GTEX-148VJ-0011-R9b-SM-5SI77 B1, A1 6.5 Brain Brain - Spinal cord (cervical c-1) 0006469 903 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.987137 450428 0.94825 0.990654 0.809432 21878 1 76 0.00221938 231 0 7.99252e+07 0.0514744 3.23308e+06 8.06792e+07 8.45765e+06 21896 3.97169e+07 0 0.138818 0.990654 0.801868 7.99252e+07 0.0036234 1.73543e+07 1.65832e+07 1.7889e+07 249 1.75392e+07 8.6253e+06 0.0029189 1.79693e+07 50.6055 0.0400733 0.994172 0 50.7587 GTEX-148VJ-0126-SM-5TDDN 0 B1 6 pieces, minimal fat; squamous epithelium is ~40 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1014 810 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988601 233094 0.978219 0.991626 0.787271 22686 1 76 0.00243114 152 0 5.84006e+07 0.0214124 267943 5.88938e+07 6.85743e+06 22708 2.90031e+07 0 0.190948 0.991626 0.780679 5.84006e+07 0.0044103 1.27989e+07 6.19077e+06 1.28453e+07 135 1.28635e+07 1.03557e+07 0.0034177 1.29537e+07 50.1746 0.0045496 0.994651 0 50.0906 GTEX-148VJ-0326-SM-5QGQE 0 B1 2 pieces, ~20-25% interstitial fat, rep delineated 8.2 Muscle Muscle - Skeletal 0011907 1016 808 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99262 242403 0.984615 0.994502 0.865457 19309 1 76 0.00194457 136 0 6.18369e+07 0.0151679 494697 6.21788e+07 4.07064e+06 19317 3.07962e+07 0 0.119158 0.994502 0.860699 6.18369e+07 0.00295665 1.36449e+07 7.71407e+06 1.36529e+07 150 1.36788e+07 1.20077e+07 0.00244965 1.37227e+07 50.0801 0.00795604 0.996384 0 50.0147 GTEX-148VJ-0426-SM-5S2V8 0 B1 2 pieces, prominent Monckeberg medial sclerosis, rep delineated; ~40% occlusve atherosis 6.1 Blood Vessel Artery - Tibial 0007610 1018 806 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.987847 225839 0.972597 0.990413 0.787051 21512 1 76 0.00211763 138 0 6.43278e+07 0.0269815 284863 6.49504e+07 5.94904e+06 21536 3.19661e+07 0 0.185546 0.990413 0.779506 6.43278e+07 0.00330167 1.38752e+07 6.92772e+06 1.39488e+07 147 1.39352e+07 1.17996e+07 0.00270812 1.40491e+07 50.2035 0.00438585 0.992978 0 50.1324 GTEX-148VJ-0626-SM-5LUAW 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40-50 microns 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1046 778 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989804 192520 0.977832 0.991769 0.779951 21613 1 76 0.00474338 126 0 5.92115e+07 0.021861 326617 5.9703e+07 5.09736e+06 21641 2.94282e+07 0 0.197881 0.991769 0.773531 5.92115e+07 0.00399612 1.30679e+07 6.57697e+06 1.30708e+07 127 1.30784e+07 1.00296e+07 0.00437049 1.31767e+07 50.1871 0.0054707 0.993733 0 50.0056 GTEX-148VJ-0726-SM-5LU8J 1 B1 2 pieces, colloid cysts up to ~2mm, delineated 5.8 Thyroid Thyroid 0002046 1050 774 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.98798 279257 0.963608 0.989986 0.684884 23273 1 76 0.00478491 121 0 6.44939e+07 0.036188 245749 6.51462e+07 5.3303e+06 23309 3.20428e+07 0 0.278723 0.989986 0.678026 6.44939e+07 0.00408039 1.4134e+07 6.77904e+06 1.41776e+07 131 1.41863e+07 7.64429e+06 0.00443336 1.42518e+07 50.1152 0.00377227 0.991992 0 50.077 GTEX-148VJ-0826-SM-5LU8V 1 B1 2 pieces, emphysematous changes, marked congestive changes, fibrosis 7 Lung Lung 0008952 1053 771 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989586 250364 0.969905 0.991496 0.720843 23054 1 76 0.00498738 115 0 6.16175e+07 0.0295394 258447 6.2146e+07 5.05635e+06 23084 3.06036e+07 0 0.249062 0.991496 0.714713 6.16175e+07 0.00420403 1.35448e+07 6.00879e+06 1.3604e+07 125 1.36083e+07 8.65149e+06 0.00459646 1.36563e+07 50.0881 0.00415871 0.993407 0 50.1092 GTEX-148VJ-0826-SM-CYKPD 1 B1 2 pieces, emphysematous changes, marked congestive changes, fibrosis 7 Lung Lung 0008952 1053 771 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 RIP-Seq GTEX-148VJ-1026-SM-5LU98 1 B1 6 pieces, squmaous mucosa up to ~0.25mm, 40-50% thickness 6.1 Esophagus Esophagus - Mucosa 0006920 1062 762 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990053 285375 0.972235 0.992282 0.816393 21046 1 76 0.00458237 136 0 6.39477e+07 0.0275425 476510 6.44451e+07 5.45493e+06 21062 3.17804e+07 0 0.155842 0.992282 0.810092 6.39477e+07 0.00405785 1.42641e+07 7.93765e+06 1.4376e+07 157 1.43548e+07 8.80656e+06 0.0043207 1.44298e+07 50.1303 0.00739405 0.994512 0 50.1952 GTEX-148VJ-1126-SM-5NQBZ 1 B1 6 pieces, all targetr muscularis, good specimens 7 Esophagus Esophagus - Muscularis 0004648 1066 758 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987826 158107 0.968098 0.99101 0.781823 22452 1 76 0.0026317 132 0 7.09972e+07 0.031728 717048 7.16413e+07 9.79674e+06 22482 3.52931e+07 0 0.186275 0.99101 0.774794 7.09972e+07 0.0054149 1.52251e+07 6.79201e+06 1.52958e+07 163 1.52862e+07 9.56739e+06 0.00401883 1.54438e+07 50.2565 0.0100089 0.994195 0 50.1159 GTEX-148VJ-1426-SM-5TDE3 1 B1 2 pieces, acute inflammatory microaggregates, unknown significance, rep delineated 6.7 Heart Heart - Atrial Appendage 0006631 1090 734 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987744 276415 0.977991 0.991659 0.831541 21656 1 76 0.00256155 185 0 7.87169e+07 0.0218043 2.21966e+06 7.9379e+07 9.94676e+06 21674 3.90941e+07 0 0.14645 0.991659 0.824605 7.87169e+07 0.00457529 1.68276e+07 1.07395e+07 1.69239e+07 206 1.69276e+07 1.12077e+07 0.00356444 1.70981e+07 50.2505 0.0279628 0.995574 0 50.1426 GTEX-148VJ-1526-SM-5Q5DU 1 B1 2 pieces, micro infarcts, moderate-marked chronic ischemic damage 5.9 Heart Heart - Left Ventricle 0006566 1093 731 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989365 100243 0.988051 0.992457 0.859304 18070 1 76 0.0030368 259 0 6.96878e+07 0.0118752 3.89795e+06 7.02175e+07 9.77166e+06 18075 3.46666e+07 0 0.128747 0.992457 0.852822 6.96878e+07 0.0049212 1.54965e+07 2.71095e+07 1.52613e+07 256 1.50959e+07 3.45654e+06 0.00397606 1.58285e+07 51.1845 0.0555125 0.995549 0 49.6176 GTEX-148VJ-1526-SM-CYKOS 1 B1 2 pieces, micro infarcts, moderate-marked chronic ischemic damage 5.9 Heart Heart - Left Ventricle 0006566 1093 731 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 RIP-Seq GTEX-148VJ-1626-SM-5QGPH 2 B1 2 pieces, cortex, ~50% of specimen, delineated; rest is adherent fat 5.8 Adrenal Gland Adrenal Gland 0002369 1094 730 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.989615 352311 0.961995 0.990783 0.800369 20864 1 76 0.00229768 144 0 6.31238e+07 0.0378254 1.96078e+06 6.37111e+07 4.24171e+06 20879 3.14274e+07 0 0.161626 0.990783 0.792992 6.31238e+07 0.00332937 1.36341e+07 1.80149e+07 1.37737e+07 172 1.36414e+07 6.96781e+06 0.00281291 1.384e+07 50.3614 0.0307762 0.991951 0 50.2546 GTEX-148VJ-1826-SM-5Q5DV 1 B1 2 pieces, glandular hyperplasia 6.2 Prostate Prostate 0002367 1097 727 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988032 161294 0.966066 0.990332 0.788862 23742 1 76 0.00242126 161 0 7.61351e+07 0.0336984 1.11281e+06 7.68784e+07 1.0395e+07 23771 3.78685e+07 0 0.177205 0.990332 0.781235 7.61351e+07 0.00392951 1.66941e+07 1.12306e+07 1.68539e+07 198 1.67808e+07 9.71974e+06 0.00317364 1.69364e+07 50.2308 0.0144749 0.992632 0 50.2382 GTEX-148VJ-2226-SM-5NQ9M 3 B1 6 pieces, glandular mucosal elements sloughed; residual lymphoid aggregates are ~20% 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 1104 720 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987091 166268 0.960303 0.99038 0.704676 25712 1 76 0.00270779 163 0 8.6869e+07 0.0392119 265564 8.77128e+07 1.16185e+07 25770 4.31578e+07 0 0.255627 0.99038 0.697897 8.6869e+07 0.00536576 1.88225e+07 1.06521e+07 1.89139e+07 176 1.89361e+07 1.25507e+07 0.00403236 1.90731e+07 50.1802 0.00302765 0.993669 0 50.1211 GTEX-148VJ-2426-SM-5NQ9Y 1 B1 6 pieces, all target muscularis 6.4 Colon Colon - Sigmoid 0001159 1107 717 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987315 165885 0.969762 0.990703 0.769467 24097 1 76 0.00260531 167 0 7.96580e+07 0.0299099 530562 8.04056e+07 1.07223e+07 24136 3.95751e+07 0 0.200294 0.990703 0.762314 7.96580e+07 0.00531582 1.72749e+07 8.50668e+06 1.73752e+07 179 1.73771e+07 1.23276e+07 0.00395593 1.75308e+07 50.2201 0.00659857 0.994092 0 50.1447 GTEX-148VJ-2526-SM-5TDEI 2 B1 2 pieces, marked tubular atrophy 5.9 Testis Testis 0000473 1108 716 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 EXCLUDE 0.986362 247821 0.9681 0.989753 0.683391 26679 1 76 0.00269471 141 0 7.25462e+07 0.0316395 1.05952e+06 7.32972e+07 8.69257e+06 26735 3.59812e+07 0 0.284709 0.989753 0.676389 7.25462e+07 0.00475487 1.59795e+07 7.60181e+06 1.61614e+07 155 1.61511e+07 8.81444e+06 0.00372126 1.62294e+07 50.1209 0.014455 0.993145 0 50.2829 GTEX-148VJ-2626-SM-5QGPI 3 B1 6 pieces, glandular mucosa completely autolyzed, mucosa up to~0.3mm 6 Colon Colon - Transverse 0001157 1119 705 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.990567 147388 0.970297 0.99276 0.800055 22263 1 76 0.00204257 132 0 5.9949e+07 0.0294522 436601 6.03862e+07 4.24725e+06 22283 2.98139e+07 0 0.170241 0.99276 0.794263 5.9949e+07 0.00332557 1.29054e+07 5.5691e+06 1.3016e+07 148 1.29671e+07 9.49134e+06 0.00268265 1.30812e+07 50.2191 0.00723015 0.994953 0 50.2133 GTEX-148VJ-2926-SM-5Q5DA 1 B1 1 piece, adenohypophysis; minute focus (~1mm) neurohypophysis noted, delineated 7 Pituitary Pituitary 0000007 1169 655 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988731 358448 0.95936 0.990831 0.755929 24567 1 76 0.0023118 270 0 9.21189e+07 0.0404125 500228 9.29714e+07 1.27028e+07 24602 4.58556e+07 0 0.203431 0.990831 0.748998 9.21189e+07 0.00363264 1.91634e+07 1.91005e+07 1.94031e+07 264 1.93757e+07 1.29541e+07 0.00297082 1.93761e+07 50.0005 0.00538045 0.992931 0 50.3107 GTEX-1497J-0004-SM-5JVBR B1 Blood Whole Blood 0013756 176 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-5029 03/23/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-1497J-0004-SM-7DRPQ B1 Blood Whole Blood 0013756 176 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6748 02/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1497J-0005-SM-5NQBD B1 8.3 Blood Whole Blood 0013756 176 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987678 726878 0.952431 0.990924 0.757706 19551 1 76 0.00313822 116 0 7.12325e+07 0.0467543 221165 7.18849e+07 9.61516e+06 19569 3.53907e+07 0 0.194725 0.990924 0.75083 7.12325e+07 0.00600698 1.54241e+07 4.11977e+07 1.55466e+07 135 1.55947e+07 1.27199e+07 0.0045679 1.56103e+07 50.025 0.00307665 0.994171 0 50.1977 GTEX-1497J-0126-SM-5Q5BK 1 B1 2 pieces, no abnormalities 7.1 Thyroid Thyroid 0002046 198 957 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.987951 322314 0.963304 0.991063 0.749564 24351 1 76 0.00206762 142 0 7.62474e+07 0.0363485 188161 7.6935e+07 6.16544e+06 24384 3.78923e+07 0 0.21374 0.991063 0.742865 7.62474e+07 0.00307676 1.65463e+07 1.23648e+07 1.669e+07 162 1.67164e+07 1.26517e+07 0.00257061 1.67534e+07 50.0553 0.00244572 0.994175 0 50.2162 GTEX-1497J-0226-SM-5QGPU 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40-50 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 210 945 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992645 208562 0.974531 0.994025 0.83628 21765 1 76 0.0021528 143 0 5.92762e+07 0.0251974 247011 5.96325e+07 4.2979e+06 21776 2.95278e+07 0 0.13825 0.994025 0.831284 5.92762e+07 0.00317546 1.295e+07 7.61316e+06 1.3084e+07 144 1.30487e+07 1.13983e+07 0.00266342 1.30711e+07 50.0429 0.00414222 0.995405 0 50.2572 GTEX-1497J-0326-SM-5Q5CN 1 B1 2 pieces, mild- moderate congestion 7.1 Lung Lung 0008952 216 939 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989523 180222 0.972594 0.991859 0.754678 24538 1 76 0.00246556 149 0 7.85045e+07 0.0270539 298323 7.91488e+07 1.07993e+07 24578 3.90221e+07 0 0.217916 0.991859 0.748534 7.85045e+07 0.00405021 1.72417e+07 7.76813e+06 1.73854e+07 166 1.73282e+07 1.27464e+07 0.00325602 1.74742e+07 50.2098 0.00376914 0.994195 0 50.2074 GTEX-1497J-0426-SM-5Q5CO 2 B1 2 pieces, moderate autolysis; Islets still visible (rep encircled) but starting to degrade noticeably 7 Pancreas Pancreas 0001150 224 931 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988406 218403 0.972481 0.990852 0.802158 23255 1 76 0.00227606 140 0 8.64443e+07 0.0272598 160399 8.72424e+07 1.1683e+07 23281 4.30151e+07 0 0.170323 0.990852 0.79482 8.64443e+07 0.00358557 1.94402e+07 1.46834e+07 1.94261e+07 159 1.95283e+07 1.98912e+07 0.0029292 1.95546e+07 50.0336 0.00183854 0.993298 0 49.9819 GTEX-1497J-0726-SM-5Q5D1 1 B1 2 pieces, moderate-severe subacute chronic congestion 6.3 Liver Liver 0001114 238 917 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.977273 1.77403e+06 0.889319 0.979952 0.742201 22117 1 76 0.00258287 204 0 9.38094e+07 0.110125 791095 9.57285e+07 1.30975e+07 22130 4.6634e+07 0 0.147118 0.979952 0.727322 9.38094e+07 0.0044786 1.85693e+07 1.07961e+08 1.91583e+07 222 1.91066e+07 1.23491e+07 0.00352814 1.88845e+07 49.7076 0.00826394 0.982631 0 50.7805 GTEX-1497J-0826-SM-5NQAJ 1 B1 6 pieces, tubules unusually well preserved. Glomeruli present 6.3 Kidney Kidney - Cortex 0001225 240 915 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.98959 382040 0.951513 0.992198 0.785736 23293 1 76 0.00312818 153 0 7.62695e+07 0.0482719 1.16557e+06 7.68693e+07 1.02506e+07 23318 3.79543e+07 0 0.165777 0.992198 0.779606 7.62695e+07 0.00577179 1.64323e+07 2.21299e+07 1.65239e+07 192 1.64899e+07 9.25754e+06 0.00444651 1.66404e+07 50.2271 0.0151631 0.994807 0 50.139 GTEX-1497J-1026-SM-5NQAV 1 B1 6 pieces, minimal atherosis 7.7 Blood Vessel Artery - Aorta 0001496 258 897 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989768 185611 0.974977 0.992828 0.826664 21750 1 76 0.00248819 140 0 7.61436e+07 0.0245684 148631 7.66936e+07 9.80922e+06 21763 3.78641e+07 0 0.148313 0.992828 0.820735 7.61436e+07 0.00537518 1.64456e+07 6.53999e+06 1.65472e+07 163 1.65719e+07 1.53333e+07 0.00392724 1.66388e+07 50.1008 0.00193798 0.995889 0 50.1539 GTEX-1497J-1226-SM-5Q5BL 1 B1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis, remote microinfarcts 6 Heart Heart - Left Ventricle 0006566 274 881 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989708 140598 0.983137 0.991683 0.856989 20032 1 76 0.00297905 196 0 7.14227e+07 0.0167542 1.17139e+06 7.20217e+07 5.07072e+06 20038 3.55643e+07 0 0.126149 0.991683 0.849861 7.14227e+07 0.0040869 1.56532e+07 1.98679e+07 1.57824e+07 222 1.54655e+07 6.97602e+06 0.00353187 1.60901e+07 50.9895 0.0162644 0.993659 0 50.2055 GTEX-1497J-1926-SM-5TDCC 2 B1 6 pieces, glandular elements of mucosa completely sloughed; residual lymphoid aggregates are ~25% residual tissue, rep delineated 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 311 844 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.983885 319105 0.958875 0.988414 0.714635 26516 1 76 0.00285439 144 0 8.13728e+07 0.0402496 246678 8.23266e+07 1.09177e+07 26556 4.0333e+07 0 0.24424 0.988414 0.706355 8.13728e+07 0.00489632 1.76056e+07 9.62258e+06 1.77384e+07 164 1.78258e+07 1.20448e+07 0.00387067 1.78756e+07 50.0697 0.00299633 0.992943 0 50.1879 GTEX-1497J-2126-SM-5NQB8 1 B1 6 pieces, all target muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 321 834 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.984039 341579 0.967062 0.989212 0.774383 23715 1 76 0.00268567 146 0 7.08097e+07 0.0326874 304454 7.15819e+07 1.01052e+07 23750 3.50909e+07 0 0.192678 0.989212 0.766029 7.08097e+07 0.00586319 1.5326e+07 7.82778e+06 1.54388e+07 160 1.54757e+07 1.04318e+07 0.00426612 1.56372e+07 50.2595 0.00425323 0.994385 0 50.1833 GTEX-1497J-2326-SM-5NQBK 0 B1 2 pieces, ~10-15% interstital fascia/fibrous tissue, rep delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 319 836 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989106 186810 0.97407 0.991972 0.801043 22233 1 76 0.00268618 139 0 6.53969e+07 0.0256595 315586 6.59261e+07 8.85159e+06 22255 3.25301e+07 0 0.173027 0.991972 0.794613 6.53969e+07 0.00527728 1.42208e+07 7.56963e+06 1.43132e+07 146 1.43017e+07 1.0687e+07 0.00397798 1.44081e+07 50.1853 0.00478696 0.994839 0 50.1619 GTEX-1497J-2426-SM-7IGNX 0 B1 6 pieces, squamous epithelium is ~50 microns; minimal adherent dermal fat 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 322 833 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995128 238698 0.978469 0.995546 0.859213 25789 1 76 0.00217818 385 0 1.34705e+08 0.0212037 1.01505e+06 1.35307e+08 8.18978e+06 25822 6.7153e+07 0 0.119256 0.995546 0.855386 1.34705e+08 0.00278106 2.97761e+07 1.38369e+07 3.01061e+07 361 3.00363e+07 2.65826e+07 0.00247949 2.99047e+07 49.8902 0.00750181 0.995964 0 50.2756 GTEX-1497J-2526-SM-5TDCE 1 B1 6 pieces, all target muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 332 823 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987806 257971 0.968466 0.990579 0.795618 23868 1 76 0.00261429 193 0 8.37278e+07 0.0312787 538248 8.45241e+07 9.37811e+06 23898 4.1609e+07 0 0.172848 0.990579 0.788122 8.37278e+07 0.00451047 1.80019e+07 7.834e+06 1.82123e+07 210 1.81355e+07 1.17866e+07 0.00355973 1.83005e+07 50.2264 0.00636798 0.993352 0 50.2905 GTEX-1497J-2626-SM-5SI9K 0 B1 2 pieces, ~20-25%% adherent or interstitlal fat/vascular elements, delineated 8 Muscle Muscle - Skeletal 0011907 329 826 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.993031 205500 0.982432 0.995068 0.877035 19883 1 76 0.00216829 213 0 8.26528e+07 0.0173372 743401 8.30625e+07 8.66774e+06 19894 4.11705e+07 0 0.105397 0.995068 0.872709 8.26528e+07 0.00327268 1.81584e+07 1.08623e+07 1.81975e+07 241 1.81459e+07 1.62805e+07 0.00271936 1.8366e+07 50.3014 0.0089499 0.997104 0 50.0539 GTEX-1497J-2726-SM-5SI9W 1 B1 6 pieces, squamous mucosa up to ~0.3mm, 20-30% thickness. Few submucosal mucus glands noted, rep delineated 7.7 Esophagus Esophagus - Mucosa 0006920 344 811 BP-47616 RNA Extraction from Paxgene-derived Lysate Plate Based 12/18/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989427 241019 0.970453 0.992369 0.789082 23371 1 76 0.00209748 203 0 8.18121e+07 0.0293166 233488 8.24412e+07 9.33553e+06 23399 4.07083e+07 0 0.181371 0.992369 0.78306 8.18121e+07 0.00319248 1.82342e+07 1.13226e+07 1.83697e+07 205 1.83975e+07 1.41048e+07 0.00264336 1.84386e+07 50.0557 0.00283218 0.995311 0 50.1852 GTEX-1497J-5001-SM-AN41V B1 Lung Lung 0008952 223 ChIP-Seq GTEX-1497J-5007-SM-AN41X B1 Heart Heart - Left Ventricle 0006566 275 ChIP-Seq GTEX-1497J-5019-SM-AN41W B1 Muscle Muscle - Skeletal 0011907 331 ChIP-Seq GTEX-14A5H-0004-SM-5DU5W B1 Blood Whole Blood 0013756 415 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14A5H-0004-SM-7DRO9 B1 Blood Whole Blood 0013756 415 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14A5H-0006-SM-5O9AI B1 7.8 Blood Whole Blood 0013756 415 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.964269 291085 0.982081 0.967881 0.797368 19378 1 76 0.00243829 130 0 8.86032e+07 0.0165087 236727 9.15435e+07 1.28767e+07 19389 4.39996e+07 0 0.184713 0.967881 0.771758 8.86032e+07 0.00428329 2.06479e+07 1.17891e+08 2.07105e+07 152 2.07218e+07 2.23196e+07 0.00335735 2.09717e+07 50.2996 0.00258595 0.971494 0 50.0757 GTEX-14A5H-0011-R10a-SM-AHZ78 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 460 ChIP-Seq GTEX-14A5H-0226-SM-5S2VK 0 B1 3 pieces, focally calcified partially (~40-50%)occlusive atherosis, rep delineated 7 Blood Vessel Artery - Tibial 0007610 519 581 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988371 218444 0.974798 0.991841 0.8297 21414 1 76 0.00201628 134 0 6.00667e+07 0.0249023 165110 6.05608e+07 6.45136e+06 21426 2.98256e+07 0 0.145098 0.991841 0.822931 6.00667e+07 0.00345131 1.30367e+07 5.19301e+06 1.31583e+07 150 1.31375e+07 1.08851e+07 0.00273129 1.32645e+07 50.2406 0.00272635 0.995312 0 50.2321 GTEX-14A5H-0326-SM-5RQIB 0 B1 2 pieces, ~30% interstitial or adherent fat/vascular elements 8.1 Muscle Muscle - Skeletal 0011907 521 579 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993604 128980 0.981147 0.994362 0.860041 20278 1 76 0.00193834 200 0 7.905e+07 0.0186146 1.20718e+06 7.94983e+07 3.8223e+06 20291 3.94117e+07 0 0.121106 0.994362 0.855192 7.905e+07 0.00259029 1.72881e+07 7.87481e+06 1.75393e+07 204 1.74367e+07 1.60769e+07 0.00226406 1.74444e+07 50.011 0.015185 0.995119 0 50.3606 GTEX-14A5H-0426-SM-5QGQF 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 525 575 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991309 194388 0.971054 0.993069 0.76469 22662 1 76 0.00208373 136 0 5.70265e+07 0.0287762 352112 5.74245e+07 3.9417e+06 22685 2.83961e+07 0 0.206363 0.993069 0.759391 5.70265e+07 0.00306443 1.24746e+07 5.86438e+06 1.25731e+07 133 1.25586e+07 8.82888e+06 0.00257321 1.25877e+07 50.0578 0.00613174 0.99483 0 50.1966 GTEX-14A5H-0526-SM-5TDCN 0 B1 2 pieces, ~15% interstitial fascia/vascular elements 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 527 573 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/02/2014 TruSeq.v1 RNASEQ 0.987558 181412 0.973241 0.990926 0.765629 23204 1 76 0.00247565 123 0 5.43002e+07 0.0265009 527407 5.47974e+07 6.85373e+06 23226 2.69611e+07 0 0.207611 0.990926 0.758682 5.43002e+07 0.00467292 1.1953e+07 6.08478e+06 1.20413e+07 132 1.20287e+07 7.87002e+06 0.00357055 1.21454e+07 50.2413 0.00962466 0.994294 0 50.1841 GTEX-14A5H-0626-SM-5TDCO 2 B1 2 pieces, spermatogenesis appears present, assessment hampered by autolysis 7.2 Testis Testis 0000473 583 517 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986908 314705 0.942961 0.990641 0.731062 32419 1 76 0.0025135 170 0 8.30588e+07 0.0567606 1.18339e+06 8.38436e+07 1.05315e+07 32474 4.12616e+07 0 0.2119 0.990641 0.724219 8.30588e+07 0.0042978 1.77631e+07 1.16147e+07 1.78723e+07 180 1.79418e+07 1.19451e+07 0.00340229 1.7981e+07 50.0546 0.0141142 0.994373 0 50.1532 GTEX-14A5H-0726-SM-5Q5DW 1 B1 2 pieces, no abnormalities 6.1 Thyroid Thyroid 0002046 593 507 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990112 170261 0.963353 0.992109 0.677471 24261 1 76 0.00233483 131 0 7.61329e+07 0.0364139 355957 7.67385e+07 1.06745e+07 24307 3.78819e+07 0 0.285882 0.992109 0.672125 7.61329e+07 0.00356307 1.65817e+07 9.16703e+06 1.66411e+07 157 1.66028e+07 9.06261e+06 0.00294771 1.6766e+07 50.2446 0.00463857 0.994105 0 50.0893 GTEX-14A5H-0826-SM-5QGPJ 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 605 495 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993498 154295 0.975166 0.994568 0.827486 21886 1 76 0.00197449 130 0 5.19664e+07 0.0246364 597262 5.22502e+07 3.38114e+06 21902 2.58828e+07 0 0.14768 0.994568 0.822991 5.19664e+07 0.00296098 1.14575e+07 5.33255e+06 1.15538e+07 136 1.14862e+07 8.93005e+06 0.0024672 1.15857e+07 50.2158 0.0114308 0.995638 0 50.2091 GTEX-14A5H-1626-SM-5SIAN 1 B1 6 pieces, all target muscularis 5.7 Colon Colon - Sigmoid 0001159 652 448 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.987466 299880 0.962 0.991324 0.765258 22180 1 76 0.00208693 136 0 6.90951e+07 0.037816 705944 6.96999e+07 6.99772e+06 22209 3.43189e+07 0 0.196743 0.991324 0.758618 6.90951e+07 0.00333748 1.47325e+07 1.17336e+07 1.48746e+07 157 1.48733e+07 1.04765e+07 0.00270977 1.49871e+07 50.1906 0.0101283 0.995182 0 50.2401 GTEX-14A5H-1826-SM-5NQAB 2 B1 6 pieces, squamous mucosa up to ~0.2mm, ~30-40% thickness, unusually advance autolysis, partially sloughing 6.1 Esophagus Esophagus - Mucosa 0006920 664 436 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 EXCLUDE 0.986568 219170 0.966825 0.989061 0.810493 22111 1 76 0.00249338 199 0 7.93632e+07 0.0329945 1.74865e+06 8.0241e+07 1.00222e+07 22134 3.9483e+07 0 0.156332 0.989061 0.801627 7.93632e+07 0.00516398 1.76419e+07 1.1703e+07 1.77526e+07 231 1.77e+07 9.83548e+06 0.00382531 1.78858e+07 50.2611 0.0217925 0.991554 0 50.1564 GTEX-14A5H-2126-SM-7IGNV 2 B1 2 pieces, ~40% adherent/intersitial fat, rep delineated. All cortex, moderately advanced autolysis 5.9 Adrenal Gland Adrenal Gland 0002369 668 432 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993621 366652 0.966544 0.994374 0.842523 23424 1 76 0.00251821 268 0 7.90412e+07 0.0333226 1.15853e+07 7.94884e+07 4.93926e+06 23443 3.94049e+07 0 0.124021 0.994374 0.837783 7.90412e+07 0.00311093 1.73328e+07 1.82524e+07 1.79673e+07 278 1.79066e+07 7.79072e+06 0.00281435 1.7452e+07 49.3572 0.145748 0.995128 0 50.8986 GTEX-14A5H-3026-SM-5RQHV 1 B1 1 piece, ~50% each adenohypophysis & neurohypophysis (delineated) 6.8 Pituitary Pituitary 0000007 721 379 BP-48437 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991465 152084 0.96474 0.992595 0.771398 24360 1 76 0.00225234 137 0 6.7088e+07 0.0350784 653405 6.75885e+07 3.45145e+06 24390 3.33894e+07 0 0.193342 0.992595 0.765686 6.7088e+07 0.00315171 1.45268e+07 6.7169e+06 1.46289e+07 162 1.46106e+07 9.45341e+06 0.00270151 1.46214e+07 50.0184 0.0096674 0.993725 0 50.1751 GTEX-14A5I-0004-SM-5DU5S C1 Blood Whole Blood 0013756 707 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14A5I-0004-SM-7DRO1 C1 Blood Whole Blood 0013756 707 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6936,LCSET-6341 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-14A5I-0005-SM-5N9FU C1 8.8 Blood Whole Blood 0013756 707 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.961127 634772 0.974308 0.962758 0.78557 18996 1 76 0.00427056 114 0 9.70596e+07 0.0244112 208224 1.00814e+08 4.84993e+06 19006 4.8257e+07 0 0.188739 0.962758 0.756313 9.70596e+07 0.00428901 2.25878e+07 1.45044e+08 2.29118e+07 150 2.29263e+07 2.46576e+07 0.00427977 2.27787e+07 49.8385 0.00206543 0.964389 0 50.3561 GTEX-14A5I-0126-SM-5TDEA 0 C1 6 pieces, squamous epithelium is ~30 microns, minimal dermal fat 6 Skin Skin - Sun Exposed (Lower leg) 0004264 881 736 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989248 186304 0.977713 0.992409 0.829419 22189 1 76 0.0022308 183 0 6.90513e+07 0.0220247 326921 6.95795e+07 8.411e+06 22212 3.43263e+07 0 0.148293 0.992409 0.823123 6.90513e+07 0.00414072 1.50347e+07 7.10068e+06 1.51356e+07 166 1.51429e+07 1.25544e+07 0.00318272 1.52397e+07 50.1592 0.00469853 0.99557 0 50.1673 GTEX-14A5I-0326-SM-5NQ9J 0 C1 2 pieces ~10% interstitial fat/vascular tissue 8.4 Muscle Muscle - Skeletal 0011907 886 732 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990915 165703 0.98277 0.993672 0.87226 20830 1 76 0.0022358 279 0 9.95042e+07 0.0169743 927004 1.00138e+08 1.40454e+07 20843 4.95292e+07 0 0.11051 0.993672 0.866741 9.95042e+07 0.00491922 2.18336e+07 1.29972e+07 2.19502e+07 294 2.19032e+07 2.01117e+07 0.00357379 2.2125e+07 50.2519 0.00925728 0.99643 0 50.1331 GTEX-14A5I-0426-SM-5NQ9V 0 C1 2 pieces, generally clean rim of adherent fat <0.1mm, small 1mm aggregate of interstitial fat 6.9 Nerve Nerve - Tibial 0001323 888 730 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987563 234683 0.967182 0.991178 0.765885 24873 1 76 0.00243696 289 0 9.784e+07 0.0325194 376723 9.87108e+07 1.39237e+07 24917 4.86149e+07 0 0.201297 0.991178 0.759129 9.784e+07 0.00538417 2.13626e+07 9.30972e+06 2.16067e+07 258 2.16295e+07 1.52028e+07 0.00390519 2.16747e+07 50.0522 0.00381643 0.994793 0 50.2841 GTEX-14A5I-0726-SM-5TDEB 1 C1 2 pieces, ductal/lobular elements (rep delineated), with typical post menopausal regression 5.7 Breast Breast - Mammary Tissue 0008367 894 726 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987881 227254 0.972575 0.991427 0.738806 24478 1 76 0.00235919 146 0 7.24706e+07 0.0271138 228244 7.30973e+07 9.34706e+06 24515 3.59918e+07 0 0.233768 0.991427 0.732472 7.24706e+07 0.00419587 1.59339e+07 7.3533e+06 1.60524e+07 157 1.60731e+07 1.12373e+07 0.00327425 1.61642e+07 50.1413 0.00312247 0.994972 0 50.1852 GTEX-14A5I-1026-SM-5Q5E3 1 C1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 899 723 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991093 205236 0.976569 0.993712 0.819572 23227 1 76 0.00218572 202 0 8.58379e+07 0.0232103 2.08454e+06 8.63811e+07 1.19421e+07 23247 4.26887e+07 0 0.156998 0.993712 0.814418 8.58379e+07 0.00367344 1.86876e+07 1.01841e+07 1.88018e+07 247 1.87228e+07 1.25576e+07 0.00292762 1.89752e+07 50.3348 0.0241319 0.996332 0 50.1523 GTEX-14A5I-1226-SM-5NQBW 1 C1 2 pieces, slight interstitial fibrosis/chronic ischemic damage 6 Heart Heart - Left Ventricle 0006566 905 717 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.983203 130346 0.990678 0.987093 0.856884 16938 1 76 0.00281175 365 0 8.60257e+07 0.00930093 6.43567e+06 8.71506e+07 1.18414e+07 16940 4.27576e+07 0 0.133794 0.987093 0.845824 8.60257e+07 0.00587525 1.87073e+07 4.7281e+07 1.89933e+07 338 1.86915e+07 2.33492e+06 0.00433746 1.92316e+07 50.7121 0.0738454 0.990983 0 50.3793 GTEX-14A5I-1326-SM-5SIAQ 1 C1 6 pieces, minimla atherosis 6.8 Blood Vessel Artery - Aorta 0001496 907 716 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.984419 218183 0.968298 0.987463 0.772859 22486 1 76 0.00205277 152 0 7.56581e+07 0.0313656 212087 7.66187e+07 7.52098e+06 22510 3.75766e+07 0 0.195438 0.987463 0.76317 7.56581e+07 0.00333592 1.61428e+07 9.89345e+06 1.63275e+07 169 1.62962e+07 1.28953e+07 0.00269237 1.64013e+07 50.1608 0.00276808 0.990507 0 50.2843 GTEX-14A5I-1726-SM-5QGQ5 1 C1 2 pieces, minimal steatosis 6.7 Liver Liver 0001114 918 708 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.994567 168393 0.972924 0.995627 0.818974 19921 1 76 0.0020796 153 0 6.68331e+07 0.0267355 1.22716e+06 6.71267e+07 4.36428e+06 19934 3.32986e+07 0 0.15395 0.995627 0.815392 6.68331e+07 0.00288105 1.4579e+07 1.0999e+07 1.47811e+07 187 1.46574e+07 8.05101e+06 0.0024799 1.47665e+07 50.1854 0.0182813 0.996687 0 50.3441 GTEX-14A5I-2126-SM-5NQA8 1 C1 2 pieces, cortex, trace adherent fat 5.9 Adrenal Gland Adrenal Gland 0002369 926 702 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.986828 598041 0.957684 0.990945 0.788585 21757 1 76 0.00249085 192 0 8.00452e+07 0.0421116 3.86128e+06 8.07766e+07 1.078e+07 21776 3.97337e+07 0 0.169099 0.990945 0.781444 8.00452e+07 0.00568558 1.69934e+07 2.27548e+07 1.73631e+07 215 1.73552e+07 8.60422e+06 0.00408158 1.73057e+07 49.9287 0.047802 0.995062 0 50.538 GTEX-14A5I-2426-SM-5Q5CP 1 C1 6 pieces, all target muscularis 5.7 Colon Colon - Sigmoid 0001159 932 698 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.981324 206522 0.968137 0.984773 0.797431 24474 1 76 0.00222834 374 0 1.01182e+08 0.0316582 1.23792e+06 1.02746e+08 1.52541e+07 24503 5.02578e+07 0 0.170706 0.984773 0.785288 1.01182e+08 0.00384932 2.18966e+07 1.04595e+07 2.20924e+07 331 2.20495e+07 1.43953e+07 0.00303599 2.2275e+07 50.2544 0.0120484 0.988222 0 50.2226 GTEX-14A5I-2726-SM-5SIB3 1 C1 6 pieces, squamous mucosa up to ~0.2mm 6.2 Vagina Vagina 0000996 939 693 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990931 185062 0.968732 0.993343 0.768186 23308 1 76 0.00201495 128 0 6.26623e+07 0.0310597 257981 6.30822e+07 6.09311e+06 23329 3.11626e+07 0 0.200546 0.993343 0.763072 6.26623e+07 0.00312293 1.377e+07 7.30173e+06 1.385e+07 145 1.38243e+07 9.58452e+06 0.0025676 1.39465e+07 50.2202 0.0040896 0.995755 0 50.1447 GTEX-14A5I-2826-SM-5SIBF 1 C1 4 pieces, no abnormalities 6.5 Brain Brain - Cerebellum 0002037 951 681 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.99053 967128 0.923069 0.992433 0.74834 23589 1 76 0.00241867 196 0 7.68829e+07 0.0767042 2.42932e+06 7.74691e+07 7.12467e+06 23615 3.82769e+07 0 0.174729 0.992433 0.742677 7.68829e+07 0.00347962 1.60462e+07 3.95199e+07 1.6297e+07 235 1.61534e+07 5.88591e+06 0.00294813 1.63425e+07 50.2908 0.0313586 0.994336 0 50.3878 GTEX-14A5I-2926-SM-5Q5CQ 1 C1 4 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 954 679 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989918 394632 0.960016 0.992305 0.834124 23140 1 76 0.0022252 267 0 7.66315e+07 0.0396607 3.60134e+06 7.72258e+07 9.63958e+06 23154 3.81371e+07 0 0.125892 0.992305 0.827706 7.66315e+07 0.00377646 1.66915e+07 2.07438e+07 1.68269e+07 261 1.66819e+07 8.36588e+06 0.00299896 1.70007e+07 50.4733 0.0466339 0.994693 0 50.202 GTEX-14A5I-3026-SM-5TDEC 1 C1 2 pieces, larger is adenohypophysis; smaller is 2.5mm piece of neurohypophysis; delineated 7.3 Pituitary Pituitary 0000007 955 678 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988295 405900 0.955176 0.991389 0.766414 24899 1 76 0.00235605 158 0 7.66177e+07 0.0445807 454547 7.72832e+07 9.54866e+06 24929 3.8083e+07 0 0.188762 0.991389 0.759814 7.66177e+07 0.00415144 1.61309e+07 1.44478e+07 1.63019e+07 175 1.63244e+07 1.18867e+07 0.00325094 1.63355e+07 50.0171 0.00588157 0.994483 0 50.2636 GTEX-14A6H-0003-SM-5GYBV B1 Blood Whole Blood 0013756 428 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-4879 03/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14A6H-0003-SM-7DROY B1 Blood Whole Blood 0013756 428 BP-46161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14A6H-0006-SM-5NQ7W B1 8.6 Blood Whole Blood 0013756 428 BP-46147 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.986685 560459 0.962354 0.988239 0.767566 19557 1 76 0.00277478 108 0 6.21706e+07 0.0363585 152196 6.29105e+07 5.09198e+06 19572 3.09172e+07 0 0.194789 0.988239 0.758539 6.21706e+07 0.00400424 1.38501e+07 4.57896e+07 1.40419e+07 118 1.40505e+07 1.22483e+07 0.00338854 1.39621e+07 49.8423 0.00241925 0.989794 0 50.3439 GTEX-14A6H-0126-SM-5QGPK 0 B1 6 pieces; significant external fat from 10-40%, epidermis measures 49 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 477 749 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992592 238145 0.967551 0.993792 0.765446 23364 1 76 0.00204681 133 0 5.73812e+07 0.0322259 303272 5.77397e+07 4.05895e+06 23387 2.85695e+07 0 0.202105 0.993792 0.760694 5.73812e+07 0.00308821 1.25478e+07 7.07556e+06 1.26476e+07 140 1.25758e+07 8.66702e+06 0.00256688 1.26938e+07 50.2335 0.0052524 0.994992 0 50.1979 GTEX-14A6H-0226-SM-5Q5DX 0 B1 2 pieces 7.4 Heart Heart - Left Ventricle 0006566 549 677 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991523 225052 0.979533 0.993964 0.850441 21990 1 76 0.00219781 269 0 9.32525e+07 0.0202318 2.56714e+06 9.38188e+07 1.19652e+07 22011 4.64226e+07 0 0.129092 0.993964 0.845308 9.32525e+07 0.00376858 2.05704e+07 1.11271e+07 2.06275e+07 293 2.06246e+07 1.68526e+07 0.00298127 2.07801e+07 50.1877 0.0273628 0.996405 0 50.0693 GTEX-14A6H-0326-SM-5NQAN 0 B1 2 pieces, adherent clot 8 Heart Heart - Atrial Appendage 0006631 554 672 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.990187 214482 0.975573 0.99289 0.816808 23080 1 76 0.00259761 198 0 8.10993e+07 0.0241259 1.26692e+06 8.16801e+07 1.11143e+07 23101 4.03605e+07 0 0.158765 0.99289 0.811001 8.10993e+07 0.0053679 1.76397e+07 1.32305e+07 1.76756e+07 225 1.76684e+07 1.27198e+07 0.00397898 1.7838e+07 50.2388 0.0155107 0.995594 0 50.0508 GTEX-14A6H-0526-SM-5NQAZ 1 B1 2 pieces; one piece includes pleura (target is 1cm below pleura), congestion/edema, inflammatory and reactive changes 6.9 Lung Lung 0008952 568 658 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987675 293341 0.968645 0.99137 0.76842 24741 1 76 0.00254866 158 0 7.88623e+07 0.0310495 232926 7.95488e+07 1.009e+07 24771 3.91751e+07 0 0.200224 0.99137 0.761789 7.88623e+07 0.00537223 1.73121e+07 1.22102e+07 1.73875e+07 169 1.7425e+07 1.3238e+07 0.00395519 1.75653e+07 50.2004 0.00292809 0.995065 0 50.1087 GTEX-14A6H-1026-SM-5SIAZ 1 B1 2 pieces (fragmented); some defects in one piece (?poor fixation) 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 585 641 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 EXCLUDE 0.989294 327353 0.96398 0.991997 0.754523 25131 1 76 0.00227918 165 0 8.34226e+07 0.0356838 645812 8.40957e+07 8.2223e+06 25158 4.14592e+07 0 0.209457 0.991997 0.748484 8.34226e+07 0.00343965 1.81189e+07 1.39509e+07 1.82203e+07 202 1.81998e+07 1.18935e+07 0.00285783 1.83629e+07 50.2231 0.00767949 0.9947 0 50.1396 GTEX-14A6H-1326-SM-5NQBC 1 B1 6 pieces; patchy eosinophilic squamous surface (?irritation) 6.4 Esophagus Esophagus - Mucosa 0006920 606 620 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.988323 262888 0.969581 0.991541 0.809449 22015 1 76 0.00250588 268 0 9.00351e+07 0.0301175 1.07577e+06 9.08032e+07 1.20629e+07 22032 4.47785e+07 0 0.160132 0.991541 0.802602 9.00351e+07 0.00529025 2.00362e+07 1.50534e+07 2.01787e+07 286 2.01788e+07 1.29335e+07 0.00389355 2.03164e+07 50.17 0.0118473 0.99476 0 50.1772 GTEX-14A6H-2026-SM-5Q5DD 1 B1 6 pieces; include residual attached fat up to 30%, minimal epidermis on 2, likely secondary to orientation of embedding 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 641 585 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987498 129457 0.9746 0.989683 0.771669 23306 1 76 0.00223859 147 0 7.1347e+07 0.0251602 238900 7.20907e+07 9.3948e+06 23339 3.55095e+07 0 0.202931 0.989683 0.763708 7.1347e+07 0.00357259 1.55986e+07 8.08267e+06 1.5692e+07 157 1.5684e+07 1.21184e+07 0.00290412 1.57559e+07 50.1144 0.00331388 0.991869 0 50.1492 GTEX-14A6H-2326-SM-5Q5B5 2 B1 2 pieces; spermatogenesis is present 6.2 Testis Testis 0000473 668 558 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990428 229223 0.938383 0.992101 0.72643 31607 1 76 0.00207587 137 0 6.8515e+07 0.0613512 991529 6.90606e+07 5.09761e+06 31658 3.41143e+07 0 0.211953 0.992101 0.720692 6.8515e+07 0.00297935 1.45944e+07 9.53478e+06 1.46697e+07 150 1.46688e+07 9.63329e+06 0.00252685 1.47003e+07 50.0536 0.0143574 0.993773 0 50.1286 GTEX-14A6H-2426-SM-5Q5BO 2 B1 2 pieces; focal solid cell nests 6.2 Thyroid Thyroid 0002046 668 558 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990173 236602 0.95801 0.991877 0.747474 23212 1 76 0.00197625 122 0 5.73702e+07 0.0417386 147091 5.784e+07 4.06165e+06 23241 2.85309e+07 0 0.210536 0.991877 0.741403 5.73702e+07 0.0029898 1.24121e+07 9.23163e+06 1.24882e+07 132 1.24569e+07 8.76165e+06 0.00248215 1.25446e+07 50.1755 0.00254307 0.993581 0 50.1527 GTEX-14A6H-2626-SM-5NQBO 1 B1 2 pieces; 10-20% internal and attached fat 6.5 Nerve Nerve - Tibial 0001323 732 494 BP-47696 RNA Extraction from Paxgene-derived Lysate Plate Based 12/20/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.987715 287616 0.963693 0.990994 0.72601 24198 1 76 0.00256321 137 0 6.75558e+07 0.0360685 265352 6.81698e+07 8.68854e+06 24242 3.35566e+07 0 0.237683 0.990994 0.719472 6.75558e+07 0.00539979 1.47678e+07 7.16191e+06 1.48205e+07 147 1.48159e+07 9.36341e+06 0.00397681 1.49815e+07 50.2778 0.00389252 0.994274 0 50.0891 GTEX-14A6H-2726-SM-5QGPL 1 B1 2 pieces 7.2 Blood Vessel Artery - Tibial 0007610 734 492 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992319 153164 0.977159 0.993944 0.845461 19767 1 76 0.00177897 120 0 5.36407e+07 0.0224635 180287 5.39675e+07 3.53356e+06 19776 2.6701e+07 0 0.131698 0.993944 0.840341 5.36407e+07 0.00292671 1.15389e+07 4.11892e+06 1.16149e+07 129 1.15652e+07 1.09156e+07 0.0023519 1.16773e+07 50.2411 0.00334066 0.995569 0 50.1641 GTEX-14A6H-2826-SM-5QGPM 0 B1 2 pieces 7.1 Muscle Muscle - Skeletal 0011907 736 490 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.993833 199470 0.978837 0.995209 0.857058 20247 1 76 0.0018797 135 0 6.1834e+07 0.0209449 634954 6.21316e+07 4.25326e+06 20255 3.08103e+07 0 0.121779 0.995209 0.852952 6.1834e+07 0.00284064 1.34182e+07 6.95511e+06 1.35679e+07 154 1.35156e+07 1.12112e+07 0.0023595 1.35448e+07 50.0539 0.0102195 0.996586 0 50.2773 GTEX-14A6H-5004-SM-AN421 B1 Heart Heart - Left Ventricle 0006566 551 ChIP-Seq GTEX-14A6H-5006-SM-7EWE9 B1 6.5 Heart Heart - Left Ventricle 0006566 551 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6444 01/28/2015 TruSeq.v1 EXCLUDE 0.991867 280320 0.972365 0.993843 0.864891 21144 1 76 0.00234035 133 0 6.52609e+07 0.0273944 2.92304e+06 6.56652e+07 5.41507e+06 21158 3.2501e+07 0 0.107473 0.993843 0.859566 6.52609e+07 0.00349186 1.43543e+07 1.1202e+07 1.45116e+07 160 1.45148e+07 1.2177e+07 0.00291496 1.44708e+07 49.9242 0.0445143 0.995818 0 50.2725 GTEX-14A6H-5010-SM-79OOV B1 6.6 Esophagus Esophagus - Mucosa 0006920 608 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.992521 204922 0.969799 0.992492 0.806514 21204 1 76 0.00313935 115 0 5.61493e+07 0.0300321 746533 5.65741e+07 3.54061e+06 21219 2.79643e+07 0 0.163285 0.992492 0.800459 5.61493e+07 0.00444 1.2527e+07 7.39766e+06 1.2584e+07 138 1.25807e+07 8.53393e+06 0.00378969 1.25335e+07 49.906 0.0131957 0.992464 0 50.1134 GTEX-14A6H-5019-SM-793DH B1 7.7 Muscle Muscle - Skeletal 0011907 736 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99487 620607 0.970624 0.996037 0.835389 21362 1 76 0.00278758 162 0 7.93633e+07 0.0291056 427416 7.96791e+07 1.10779e+07 21377 3.95547e+07 0 0.135235 0.996037 0.832078 7.93633e+07 0.00319963 1.71186e+07 1.2395e+07 1.71736e+07 178 1.7243e+07 1.59643e+07 0.00299336 1.71415e+07 49.8524 0.00536422 0.997204 0 50.0802 GTEX-14A6H-5019-SM-AN424 B1 Muscle Muscle - Skeletal 0011907 736 ChIP-Seq GTEX-14ABY-0003-SM-5CV94 B1 Blood Whole Blood 0013756 1168 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14ABY-0003-SM-7DRQD B1 Blood Whole Blood 0013756 1168 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-6341,LCSET-6909 03/06/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14ABY-0005-SM-5O99U B1 7.5 Blood Whole Blood 0013756 1168 BP-46281 RNA isolation_PAXgene Blood RNA (Manual) 11/27/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.95898 1.67227e+06 0.813677 0.962476 0.587211 15786 1 76 0.00240414 100 0 3.27796e+07 0.185739 186083 3.40576e+07 4.76039e+06 15791 1.62787e+07 0 0.226466 0.962476 0.565176 3.27796e+07 0.00456098 6.12506e+06 7.74568e+07 6.42456e+06 120 6.42159e+06 4.87104e+06 0.00347864 6.29512e+06 49.5027 0.00546377 0.965972 0 51.1933 GTEX-14ABY-0011-R10a-SM-AHZ73 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1167 ChIP-Seq GTEX-14ABY-0011-R11a-SM-5SI7C B1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 1167 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.9899 526538 0.940715 0.992168 0.744985 23512 1 76 0.00212159 157 0 7.82153e+07 0.0588938 1.04394e+06 7.88327e+07 7.60239e+06 23536 3.89103e+07 0 0.195729 0.992168 0.739151 7.82153e+07 0.00325139 1.67125e+07 1.72363e+07 1.68708e+07 202 1.68771e+07 9.90759e+06 0.0026852 1.68812e+07 50.0061 0.0132425 0.994437 0 50.2358 GTEX-14ABY-0011-R1a-SM-6EU2W B1, A1 6.8 Brain Brain - Hippocampus 0001954 1167 BP-50015 RNA isolation_PAXgene Tissue miRNA 02/28/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.993915 603893 0.955922 0.994875 0.840345 23687 1 76 0.00387337 274 0 8.66265e+07 0.043701 5.56967e+06 8.70728e+07 8.13648e+06 23704 4.31647e+07 0 0.115577 0.994875 0.836038 8.66265e+07 0.0036139 1.89077e+07 2.45563e+07 1.89675e+07 266 1.8893e+07 1.03267e+07 0.00374376 1.90653e+07 50.2269 0.0639656 0.995835 0 50.0789 GTEX-14ABY-0011-R4b-SM-5S2VN B1, A1 5.8 Brain Brain - Amygdala 0001876 1167 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990396 743446 0.95233 0.993075 0.822023 23790 1 76 0.00186152 269 0 8.59725e+07 0.0472958 5.4631e+06 8.6572e+07 8.70491e+06 23812 4.27758e+07 0 0.130307 0.993075 0.81633 8.59725e+07 0.00291193 1.8634e+07 2.71403e+07 1.87909e+07 309 1.87192e+07 9.47292e+06 0.00238531 1.89279e+07 50.2771 0.0631047 0.995754 0 50.2096 GTEX-14ABY-0011-R5b-SM-5SI7B B1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 1167 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990184 1.02666e+06 0.931157 0.993015 0.78062 23691 1 76 0.00190658 196 0 7.39724e+07 0.0684697 4.11501e+06 7.44928e+07 7.3522e+06 23705 3.68044e+07 0 0.150537 0.993015 0.775167 7.39724e+07 0.00317165 1.55905e+07 4.41364e+07 1.56381e+07 247 1.56242e+07 7.49383e+06 0.00253731 1.58066e+07 50.2902 0.0552404 0.995846 0 50.0763 GTEX-14ABY-0011-R6a-SM-5PNWR B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1167 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993169 744850 0.947685 0.994464 0.799071 24084 1 76 0.00190108 268 0 7.76489e+07 0.0518496 3.37619e+06 7.80812e+07 6.80038e+06 24103 3.86841e+07 0 0.148614 0.994464 0.794648 7.76489e+07 0.00275791 1.67084e+07 2.37831e+07 1.67922e+07 257 1.67168e+07 9.76646e+06 0.00232894 1.68895e+07 50.2569 0.0432394 0.995759 0 50.1249 GTEX-14ABY-0011-R7b-SM-5PNWS B1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1167 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993316 854031 0.947025 0.994834 0.807005 23341 1 76 0.00182736 267 0 7.60683e+07 0.0526788 4.99313e+06 7.64633e+07 6.72293e+06 23359 3.78847e+07 0 0.14002 0.994834 0.802836 7.60683e+07 0.00285822 1.62935e+07 2.9575e+07 1.65524e+07 264 1.6463e+07 7.67768e+06 0.002342 1.65055e+07 50.0645 0.065301 0.996352 0 50.3942 GTEX-14ABY-0011-R9a-SM-5PNZK B1, A1 8.2 Brain Brain - Spinal cord (cervical c-1) 0006469 1167 BP-48227 RNA isolation_PAXgene Tissue miRNA 01/12/2014 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992927 733962 0.95729 0.993479 0.80083 25536 1 76 0.00293623 397 0 1.36821e+08 0.0422529 1.87673e+06 1.37719e+08 3.64652e+06 25576 6.81593e+07 0 0.15646 0.993479 0.795608 1.36821e+08 0.00327794 3.03129e+07 1.99177e+07 3.06593e+07 351 3.03936e+07 2.17999e+07 0.00310699 3.06491e+07 50.2093 0.0136272 0.994031 0 50.284 GTEX-14ABY-0126-SM-62LDI 1 B1 2 pieces; minimal interstitial fat 7 Muscle Muscle - Skeletal 0011907 1289 580 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.990005 252586 0.984825 0.993559 0.888678 19885 1 76 0.00232014 269 0 1.02293e+08 0.0148058 1.35146e+06 1.02956e+08 7.67742e+06 19894 5.08798e+07 0 0.0961467 0.993559 0.882954 1.02293e+08 0.0028388 2.17939e+07 1.19674e+07 2.17596e+07 268 2.17952e+07 2.2937e+07 0.00257854 2.2068e+07 50.311 0.0131266 0.997112 0 49.9606 GTEX-14ABY-0226-SM-5TDCQ 1 B1 6 pieces; ~10 - 20% interstitial (periadnexal) fat 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1291 578 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989136 231296 0.973551 0.992065 0.819727 24904 1 76 0.00223927 189 0 7.77519e+07 0.0261747 525384 7.83738e+07 9.2383e+06 24925 3.86600e+07 0 0.153824 0.992065 0.813222 7.77519e+07 0.00414405 1.69565e+07 8.87667e+06 1.70008e+07 180 1.70209e+07 1.46665e+07 0.00318885 1.71588e+07 50.2018 0.00670357 0.994994 0 50.0651 GTEX-14ABY-0326-SM-5TDDK 1 B1 2 pieces; ~10% of fibrovascular component 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1292 577 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988596 173710 0.971565 0.991683 0.807837 22780 1 76 0.00223722 133 0 5.9093e+07 0.0281151 456020 5.95885e+07 7.08319e+06 22801 2.93675e+07 0 0.163727 0.991683 0.801119 5.9093e+07 0.00417377 1.28818e+07 5.78059e+06 1.29397e+07 142 1.29416e+07 1.03507e+07 0.00320248 1.30563e+07 50.2208 0.00765281 0.99477 0 50.1121 GTEX-14ABY-0626-SM-5Q5C9 1 B1 2 pieces; spermatogenesis present but possibly reduced 6.3 Testis Testis 0000473 1298 571 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990363 306860 0.92174 0.992269 0.73413 32733 1 76 0.00182273 160 0 7.72663e+07 0.0778742 636511 7.78683e+07 5.2821e+06 32782 3.84602e+07 0 0.18761 0.992269 0.728454 7.72663e+07 0.00274888 1.57096e+07 1.28233e+07 1.5762e+07 160 1.57703e+07 1.32801e+07 0.00228492 1.58334e+07 50.0998 0.0081742 0.994175 0 50.0833 GTEX-14ABY-0726-SM-5Q5DF 2 B1 2 pieces; fibrovascular stroma and glandular component with diffusely sloughed epithelium and numerous corpora amylacea, stroma intact 5.7 Prostate Prostate 0002367 1299 570 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.979945 185331 0.962028 0.982306 0.762181 26279 1 76 0.00221905 206 0 8.7339e+07 0.0377089 1.48877e+06 8.89122e+07 1.17276e+07 26320 4.34143e+07 0 0.199847 0.982306 0.748695 8.7339e+07 0.00384246 1.89703e+07 1.10754e+07 1.91558e+07 230 1.90831e+07 1.19028e+07 0.0030288 1.92488e+07 50.2161 0.0167442 0.984667 0 50.2433 GTEX-14ABY-0926-SM-5Q5DY 2 B1 2 pieces; interstitial fibrosis and aggregates of lymphocytes (outlined) consistent with Hashimoto thyroiditis; congestion 7.1 Thyroid Thyroid 0002046 1342 527 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991298 229364 0.96828 0.993627 0.807586 24563 1 76 0.00213549 204 0 8.46892e+07 0.0311847 375180 8.52324e+07 1.13076e+07 24595 4.21234e+07 0 0.160694 0.993627 0.802439 8.46892e+07 0.00342548 1.85473e+07 1.01703e+07 1.86318e+07 204 1.8639e+07 1.56626e+07 0.00277898 1.87326e+07 50.1253 0.00440185 0.995957 0 50.1137 GTEX-14ABY-1126-SM-5Q5F8 2 B1 2 pieces; marked congestion; sloughed bronchial epithelium 6.1 Lung Lung 0008952 1344 525 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.989093 137663 0.970884 0.991687 0.779473 24075 1 76 0.00228926 163 0 7.72918e+07 0.0288472 1.16688e+06 7.79398e+07 1.096e+07 24106 3.84159e+07 0 0.191411 0.991687 0.772993 7.72918e+07 0.00372248 1.70324e+07 8.45241e+06 1.71189e+07 194 1.70652e+07 1.09491e+07 0.003004 1.72796e+07 50.3121 0.0149715 0.99428 0 50.1267 GTEX-14ABY-1126-SM-CYKOT 2 B1 2 pieces; marked congestion; sloughed bronchial epithelium 6.1 Lung Lung 0008952 1344 525 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 RIP-Seq GTEX-14ABY-1326-SM-CYKRP 1 B1 2 pieces; prominent interstitial fibrosis and focal extensive scarring (outlined) 5.6 Heart Heart - Left Ventricle 0006566 1347 522 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-14ABY-1926-SM-62LDJ 1 B1 2 pieces; minimal fibrovascular component 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1366 503 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986223 247490 0.971513 0.989997 0.813112 23123 1 76 0.00283903 160 0 7.20382e+07 0.0281856 914748 7.27661e+07 5.02424e+06 23143 3.57691e+07 0 0.158401 0.989997 0.804978 7.20382e+07 0.00368088 1.58292e+07 1.07238e+07 1.59461e+07 183 1.59527e+07 1.09576e+07 0.00325835 1.60798e+07 50.1984 0.0125711 0.993771 0 50.184 GTEX-14ABY-2026-SM-62LDL 1 B1 6 pieces; minimal amount of periadnexal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1367 502 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987657 310881 0.971007 0.991696 0.781327 26597 1 76 0.00280193 388 0 1.40695e+08 0.0287635 717897 1.41874e+08 9.51128e+06 26663 6.99076e+07 0 0.18968 0.991696 0.774839 1.40695e+08 0.00365567 3.07477e+07 1.63012e+07 3.09979e+07 367 3.10778e+07 2.33399e+07 0.00322706 3.11876e+07 50.0882 0.00506012 0.995735 0 50.2026 GTEX-14ABY-2126-SM-5QGQZ 1 B1 2 pieces; gynecomastoid ductal and stromal accentuation 6.1 Breast Breast - Mammary Tissue 0008367 1370 499 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992047 179414 0.975915 0.993421 0.858689 22552 1 76 0.00177804 160 0 6.36438e+07 0.0237417 359501 6.40653e+07 4.3788e+06 22571 3.16769e+07 0 0.117226 0.993421 0.853039 6.36438e+07 0.00284714 1.38295e+07 8.69307e+06 1.39727e+07 155 1.38904e+07 1.45412e+07 0.00231185 1.40113e+07 50.2166 0.00561148 0.994794 0 50.2575 GTEX-14ABY-3026-SM-664NE 1 B1 2 pieces; 6.5 Brain Brain - Cerebellum 0002037 1423 446 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.99095 814850 0.927744 0.991642 0.700392 24776 1 76 0.00248655 269 0 9.87699e+07 0.0718936 1.66729e+06 9.96024e+07 6.37908e+06 24811 4.91677e+07 0 0.227352 0.991642 0.694538 9.87699e+07 0.00327091 2.09117e+07 3.72908e+07 2.11476e+07 264 2.11118e+07 1.15714e+07 0.00287846 2.10233e+07 49.8949 0.0167394 0.992334 0 50.2805 GTEX-14ABY-3126-SM-664NF 1 B1 1 piece; mostly adenohypophysis; small neurohypophysis component [outlined]; congestion 6.3 Pituitary Pituitary 0000007 1424 445 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991439 415149 0.953746 0.992441 0.766694 25559 1 76 0.00233966 207 0 9.03361e+07 0.0459901 336224 9.10242e+07 5.81556e+06 25604 4.49595e+07 0 0.187052 0.992441 0.760899 9.03361e+07 0.00337741 1.88281e+07 1.87933e+07 1.90239e+07 216 1.89979e+07 1.52522e+07 0.00285802 1.89475e+07 49.9337 0.00369379 0.993443 0 50.2586 GTEX-14AS3-0003-SM-5DU52 B1 Blood Whole Blood 0013756 -1 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14AS3-0003-SM-7DRO8 B1 Blood Whole Blood 0013756 -1 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14AS3-0006-SM-5NQC2 B1 8.3 Blood Whole Blood 0013756 -1 BP-46281 RNA isolation_PAXgene Blood RNA (Manual) 11/27/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.986627 694432 0.951788 0.989371 0.748722 21852 1 76 0.00251364 149 0 9.12711e+07 0.0475859 226824 9.22516e+07 1.21759e+07 21882 4.53509e+07 0 0.203066 0.989371 0.740764 9.12711e+07 0.00544965 1.98992e+07 4.65343e+07 2.00933e+07 172 2.01114e+07 1.65599e+07 0.00397758 2.01340e+07 50.0281 0.00245875 0.992115 0 50.2427 GTEX-14AS3-0126-SM-5Q5F4 0 B1 2 pieces 6.8 Liver Liver 0001114 98 546 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990736 298140 0.969857 0.993663 0.810699 21474 1 76 0.00212242 134 0 7.38249e+07 0.0299947 1.04465e+06 7.42957e+07 1.00427e+07 21496 3.66999e+07 0 0.159158 0.993663 0.805561 7.38249e+07 0.00370698 1.59479e+07 9.90624e+06 1.60057e+07 159 1.5967e+07 1.41631e+07 0.00291237 1.61863e+07 50.3411 0.0140607 0.99659 0 50.0905 GTEX-14AS3-0226-SM-5Q5B6 0 B1 2 pieces; some fibrosis and nodularity with lymphocytic aggregates, c/w Hashimoto's thyroiditis 5.9 Thyroid Thyroid 0002046 99 545 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991618 173219 0.956565 0.993269 0.713409 24548 1 76 0.00208784 125 0 6.27181e+07 0.0429076 708174 6.31432e+07 4.74455e+06 24580 3.12024e+07 0 0.243156 0.993269 0.708607 6.27181e+07 0.00306859 1.36032e+07 6.55803e+06 1.36398e+07 141 1.36019e+07 8.18957e+06 0.0025774 1.37407e+07 50.2538 0.0112154 0.99492 0 50.0672 GTEX-14AS3-0326-SM-5Q5DB 1 B1 2 pieces; well preserved, numerous islets seen 5.9 Pancreas Pancreas 0001150 100 544 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990905 202080 0.974318 0.993119 0.811021 21999 1 76 0.00212583 108 0 7.8545e+07 0.0254356 595580 7.90891e+07 1.11886e+07 22021 3.91053e+07 0 0.163296 0.993119 0.805441 7.8545e+07 0.00353235 1.78375e+07 2.2633e+07 1.80504e+07 130 1.79919e+07 2.07707e+07 0.00282752 1.80697e+07 50.1079 0.00753049 0.995334 0 50.2967 GTEX-14AS3-0426-SM-5QGQK 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 101 543 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.993395 168145 0.974387 0.994599 0.822491 21947 1 76 0.00216446 144 0 6.38204e+07 0.0253785 2.48326e+06 6.4167e+07 4.18761e+06 21958 3.18004e+07 0 0.151896 0.994599 0.818049 6.38204e+07 0.00317316 1.40038e+07 8.63844e+06 1.41515e+07 170 1.4059e+07 8.31309e+06 0.0026682 1.41679e+07 50.193 0.0387 0.995802 0 50.2624 GTEX-14AS3-0526-SM-5QGQQ 1 B1 5 pieces; atherosis 6.3 Blood Vessel Artery - Aorta 0001496 107 537 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.99125 162374 0.976004 0.992709 0.834733 21095 1 76 0.00186122 140 0 6.23176e+07 0.0235949 210604 6.27753e+07 4.22046e+06 21109 3.10179e+07 0 0.141271 0.992709 0.828647 6.23176e+07 0.00295053 1.35446e+07 4.23573e+06 1.36433e+07 149 1.36021e+07 1.19961e+07 0.00240507 1.36783e+07 50.1396 0.00335489 0.994167 0 50.1815 GTEX-14AS3-0626-SM-5QGQD 0 B1 6 pieces 8.9 Esophagus Esophagus - Mucosa 0006920 108 536 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992675 174220 0.975157 0.993858 0.800656 21191 1 76 0.00191294 133 0 6.06473e+07 0.0246141 365403 6.10221e+07 4.52364e+06 21206 3.02293e+07 0 0.174501 0.993858 0.795739 6.06473e+07 0.00275676 1.35826e+07 8.29305e+06 1.36354e+07 139 1.36218e+07 1.16912e+07 0.00233435 1.36669e+07 50.0825 0.00598804 0.995041 0 50.0969 GTEX-14AS3-0726-SM-5S2NY 1 B1 6 pieces; well trimmed 8.4 Esophagus Esophagus - Muscularis 0004648 111 533 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992741 327307 0.974086 0.994369 0.831037 20747 1 76 0.00177367 146 0 5.75233e+07 0.0255765 721204 5.7849e+07 3.87309e+06 20759 2.86122e+07 0 0.143049 0.994369 0.826358 5.75233e+07 0.00265562 1.23793e+07 4.38101e+06 1.24786e+07 144 1.24224e+07 1.03587e+07 0.00221392 1.25281e+07 50.2118 0.012467 0.995998 0 50.1996 GTEX-14AS3-0826-SM-5TDD5 0 B1 6 pieces; well trimmed 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 116 528 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989605 234392 0.975637 0.992503 0.851267 22044 1 76 0.00228914 175 0 7.52235e+07 0.0240716 1.34405e+06 7.57918e+07 9.55367e+06 22057 3.74068e+07 0 0.12437 0.992503 0.844885 7.52235e+07 0.00409967 1.62822e+07 7.29666e+06 1.63913e+07 190 1.63658e+07 1.35549e+07 0.00319176 1.6516e+07 50.2284 0.0177335 0.995401 0 50.1669 GTEX-14AS3-0926-SM-5TDD6 0 B1 2 pieces; some congestion and pigmented macrophages 6.8 Lung Lung 0008952 120 524 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987605 274082 0.970414 0.990747 0.779315 24782 1 76 0.0025295 166 0 7.98681e+07 0.0292359 482010 8.06141e+07 9.32165e+06 24816 3.96987e+07 0 0.1911 0.990747 0.772103 7.98681e+07 0.00444341 1.75362e+07 8.98112e+06 1.77311e+07 183 1.77433e+07 1.26047e+07 0.00348342 1.77653e+07 50.031 0.00597923 0.993889 0 50.2763 GTEX-14AS3-1026-SM-5TDD7 0 B1 4 pieces; well trimmed 7.2 Colon Colon - Sigmoid 0001159 123 521 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990342 193126 0.974672 0.993179 0.832716 22572 1 76 0.00226397 177 0 7.61761e+07 0.0250428 1.04753e+06 7.66993e+07 9.30832e+06 22587 3.7881e+07 0 0.141955 0.993179 0.827037 7.61761e+07 0.00382046 1.64908e+07 7.42583e+06 1.65957e+07 187 1.65719e+07 1.33793e+07 0.00303999 1.67191e+07 50.2211 0.0136576 0.996016 0 50.1585 GTEX-14AS3-1126-SM-5Q5CR 1 B1 6 pieces; full thickness sections 7.1 Colon Colon - Transverse 0001157 126 518 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990277 147636 0.975599 0.992807 0.829358 22618 1 76 0.00211655 220 0 8.5913e+07 0.0241383 1.26676e+06 8.65355e+07 1.27471e+07 22640 4.27461e+07 0 0.146241 0.992807 0.823392 8.5913e+07 0.00354072 1.87115e+07 7.33021e+06 1.88159e+07 251 1.87602e+07 1.40976e+07 0.00282682 1.89707e+07 50.2789 0.0146386 0.995336 0 50.1391 GTEX-14AS3-1326-SM-5RQJE 0 B1 2 pieces; focus of endometriosis 5.9 Ovary Ovary 0000992 131 513 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991768 228684 0.968837 0.993225 0.749472 21458 1 76 0.00201786 129 0 5.58075e+07 0.0309065 280380 5.61882e+07 2.65745e+06 21484 2.77737e+07 0 0.219365 0.993225 0.744394 5.58075e+07 0.00291213 1.22817e+07 6.03229e+06 1.23645e+07 126 1.2346e+07 1.02601e+07 0.00246434 1.23868e+07 50.0825 0.00499002 0.994682 0 50.168 GTEX-14AS3-1526-SM-5Q5ED 0 B1 4 pieces; includes from 5-10% internal and attached fat 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 135 509 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990391 171084 0.969484 0.993275 0.806892 22818 1 76 0.00218068 151 0 6.16318e+07 0.0303114 656911 6.2049e+07 8.07309e+06 22843 3.06497e+07 0 0.162592 0.993275 0.801466 6.16318e+07 0.00386669 1.3391e+07 7.40122e+06 1.34804e+07 147 1.34551e+07 1.04175e+07 0.00302123 1.35903e+07 50.2498 0.010587 0.99616 0 50.1663 GTEX-14AS3-1626-SM-5S2OY 1 B1 2 pieces; adipose tissue admixed with stroma with ducts and lobules, focal cystic change 6 Breast Breast - Mammary Tissue 0008367 139 505 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.986494 122240 0.978939 0.988599 0.866753 22958 1 76 0.00190694 167 0 6.97885e+07 0.0202122 542310 7.05933e+07 5.1766e+06 22974 3.46847e+07 0 0.112186 0.988599 0.856871 6.97885e+07 0.00270308 1.52603e+07 8.14228e+06 1.53914e+07 164 1.53292e+07 1.70065e+07 0.00230416 1.54772e+07 50.2401 0.00768217 0.990704 0 50.2139 GTEX-14AS3-1726-SM-5RQJV 0 B1 6 pieces 8.7 Vagina Vagina 0000996 141 503 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991967 153757 0.983972 0.992987 0.759514 20385 1 76 0.00216041 133 0 6.13066e+07 0.0157948 242837 6.17396e+07 3.16125e+06 20404 3.05387e+07 0 0.224457 0.992987 0.754187 6.13066e+07 0.00284284 1.38639e+07 8.85474e+06 1.38929e+07 136 1.39018e+07 1.07677e+07 0.00250128 1.39189e+07 50.0307 0.00393324 0.994006 0 50.0521 GTEX-14AS3-1826-SM-5TDD8 0 B1 2 pieces; myometrium only in this section 7.3 Uterus Uterus 0000995 145 499 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98803 225965 0.967536 0.991688 0.754999 23430 1 76 0.00231274 125 0 6.27033e+07 0.0322082 228640 6.32289e+07 8.00266e+06 23452 3.11458e+07 0 0.212537 0.991688 0.748723 6.27033e+07 0.00417404 1.37205e+07 6.41224e+06 1.38276e+07 136 1.38413e+07 1.00858e+07 0.00323996 1.3931e+07 50.1616 0.00361607 0.995345 0 50.1943 GTEX-14AS3-2026-SM-5TDD9 1 B1 2 pieces; includes significant portion of nerve, larger vessels and tendon 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 266 378 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989799 218651 0.975298 0.992696 0.825644 22920 1 76 0.00230092 160 0 7.28074e+07 0.0243972 791874 7.33431e+07 8.11055e+06 22937 3.62014e+07 0 0.149654 0.992696 0.819614 7.28074e+07 0.00426121 1.5985e+07 6.71135e+06 1.60768e+07 171 1.60643e+07 1.31024e+07 0.0032782 1.62025e+07 50.2142 0.0107968 0.995594 0 50.1432 GTEX-14AS3-2126-SM-5S2MK 0 B1 2 pieces; one piece is 30% fat 8.4 Muscle Muscle - Skeletal 0011907 263 381 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993754 299255 0.982301 0.995417 0.869338 18674 1 76 0.00164926 131 0 6.44519e+07 0.017495 1.1846e+06 6.47486e+07 4.13827e+06 18682 3.20899e+07 0 0.112963 0.995417 0.865354 6.44519e+07 0.00258568 1.39413e+07 6.85674e+06 1.40504e+07 152 1.39716e+07 1.34289e+07 0.00211669 1.41198e+07 50.2637 0.0182953 0.997079 0 50.195 GTEX-14AS3-2226-SM-5S2OX 0 B1 2 pieces; 20-60% internal and attached fat 5.7 Nerve Nerve - Tibial 0001323 260 384 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99103 204968 0.969955 0.992607 0.790966 22618 1 76 0.00186543 150 0 6.37771e+07 0.029794 363338 6.42521e+07 4.59003e+06 22638 3.17291e+07 0 0.178989 0.992607 0.785118 6.37771e+07 0.00270131 1.39993e+07 5.81578e+06 1.41627e+07 156 1.40812e+07 1.01827e+07 0.00228271 1.41824e+07 50.179 0.00565488 0.994184 0 50.2902 GTEX-14AS3-2326-SM-5S2NZ 1 B1 2 pieces; atherosis 4.8 Blood Vessel Artery - Tibial 0007610 259 385 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.989971 192662 0.975107 0.991991 0.867118 20183 1 76 0.0016938 150 0 6.63716e+07 0.0244397 354478 6.69074e+07 5.10937e+06 20190 3.2999e+07 0 0.107988 0.991991 0.860174 6.63716e+07 0.00256889 1.41111e+07 5.42767e+06 1.42306e+07 161 1.41553e+07 1.42741e+07 0.00213045 1.43191e+07 50.2877 0.00529804 0.994011 0 50.2109 GTEX-14AS3-5007-SM-AN41Z B1 Lung Lung 0008952 121 ChIP-Seq GTEX-14AS3-5016-SM-AN41Y B1 Muscle Muscle - Skeletal 0011907 264 ChIP-Seq GTEX-14ASI-0001-SM-5CV9M C1 Blood Whole Blood 0013756 1159 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14ASI-0001-SM-7DROX C1 Blood Whole Blood 0013756 1159 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14ASI-0011-R10a-SM-AHZNF C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1177 ChIP-Seq GTEX-14ASI-0011-R10b-SM-5S2VZ C1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 1177 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991992 731489 0.94955 0.99409 0.826695 23216 1 76 0.00228327 200 0 7.44837e+07 0.0500695 2.10002e+06 7.49265e+07 7.66053e+06 23228 3.70789e+07 0 0.122855 0.99409 0.821809 7.44837e+07 0.0032696 1.60535e+07 2.01838e+07 1.61336e+07 233 1.60972e+07 9.40654e+06 0.00277539 1.62397e+07 50.2204 0.0280277 0.996188 0 50.1245 GTEX-14ASI-0011-R11b-SM-6AJBJ C1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 1177 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.98949 685609 0.932668 0.992075 0.753673 22992 1 76 0.00249152 159 0 7.25662e+07 0.0669876 1.64427e+06 7.31459e+07 5.17551e+06 23016 3.60923e+07 0 0.178995 0.992075 0.7477 7.25662e+07 0.00352504 1.52949e+07 2.46708e+07 1.55023e+07 182 1.54888e+07 8.37609e+06 0.00300693 1.5488e+07 49.9987 0.0224793 0.99466 0 50.3367 GTEX-14ASI-0011-R1b-SM-5S2TY C1, A1 5.9 Brain Brain - Hippocampus 0001954 1177 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991182 779828 0.945588 0.993871 0.813311 23367 1 76 0.00257812 264 0 7.73668e+07 0.0541849 4.92224e+06 7.78439e+07 7.73034e+06 23388 3.84857e+07 0 0.132277 0.993871 0.808326 7.73668e+07 0.00384307 1.6601e+07 2.96606e+07 1.66811e+07 257 1.6496e+07 6.64856e+06 0.00320888 1.69992e+07 50.7512 0.0632322 0.996559 0 50.1203 GTEX-14ASI-0011-R2b-SM-5YY9H C1, A1 5.8 Brain Brain - Substantia nigra 0002038 1177 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991546 397000 0.966552 0.992797 0.832751 22752 1 76 0.00343647 271 0 8.42043e+07 0.0332498 8.49441e+06 8.48153e+07 3.84346e+06 22772 4.19383e+07 0 0.1338 0.992797 0.826753 8.42043e+07 0.00404033 1.82473e+07 2.53255e+07 1.86941e+07 304 1.83562e+07 7.29311e+06 0.00373802 1.86711e+07 50.4252 0.100152 0.994048 0 50.6047 GTEX-14ASI-0011-R4a-SM-69LQ4 C1, A1 6.5 Brain Brain - Amygdala 0001876 1177 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.986442 768959 0.947104 0.988072 0.830605 22514 1 76 0.002897 266 0 7.78249e+07 0.0527288 6.1655e+06 7.87643e+07 4.62453e+06 22529 3.87405e+07 0 0.116499 0.988072 0.820698 7.78249e+07 0.00383289 1.67206e+07 3.26889e+07 1.68145e+07 287 1.65762e+07 5.30902e+06 0.00336417 1.70805e+07 50.7492 0.0782778 0.989703 0 50.1399 GTEX-14ASI-0011-R5b-SM-6EU2M C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 1177 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989208 817988 0.949468 0.990914 0.811241 23157 1 76 0.00509077 265 0 8.21119e+07 0.0503322 6.2312e+06 8.28648e+07 8.3796e+06 23170 4.08941e+07 0 0.138227 0.990914 0.80387 8.21119e+07 0.00503751 1.73319e+07 4.11672e+07 1.77024e+07 259 1.74741e+07 5.76465e+06 0.00506419 1.77024e+07 50.3245 0.0751972 0.99262 0 50.5287 GTEX-14ASI-0011-R6a-SM-5S2UZ C1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1177 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991939 582499 0.948371 0.993721 0.804578 23495 1 76 0.00271939 267 0 7.65805e+07 0.0514025 5.10476e+06 7.70643e+07 7.64078e+06 23511 3.81436e+07 0 0.143793 0.993721 0.799526 7.65805e+07 0.00378396 1.64537e+07 2.54451e+07 1.65181e+07 258 1.64003e+07 6.67638e+06 0.00325072 1.67061e+07 50.4619 0.0662402 0.995504 0 50.0977 GTEX-14ASI-0011-R7b-SM-5YY9G C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 1177 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990665 928966 0.947717 0.992124 0.801613 23411 1 76 0.00339143 269 0 8.95227e+07 0.0520665 6.53351e+06 9.02334e+07 3.94011e+06 23428 4.45772e+07 0 0.146104 0.992124 0.795299 8.95227e+07 0.00418122 1.89786e+07 4.15462e+07 1.92114e+07 291 1.89559e+07 7.28042e+06 0.00378574 1.93662e+07 50.5353 0.0724068 0.993583 0 50.3048 GTEX-14ASI-0011-R8b-SM-5S2UB C1, A1 6.9 Brain Brain - Hypothalamus 0001898 1177 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990378 663589 0.950584 0.99277 0.808434 24980 1 76 0.00254541 270 0 8.91156e+07 0.0491122 3.9346e+06 8.97646e+07 9.11727e+06 25004 4.43527e+07 0 0.14215 0.99277 0.802589 8.91156e+07 0.00355938 1.92959e+07 2.48221e+07 1.93051e+07 296 1.92337e+07 9.32239e+06 0.00305117 1.9564e+07 50.4257 0.0438324 0.995162 0 50.0118 GTEX-14ASI-0326-SM-5S2VH 1 C1 2 pieces; well trimmed 6.6 Nerve Nerve - Tibial 0001323 1297 1383 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990475 251219 0.965796 0.992876 0.731159 24109 1 76 0.0022544 149 0 7.05137e+07 0.0338985 150940 7.10196e+07 6.66471e+06 24151 3.50742e+07 0 0.234637 0.992876 0.725951 7.05137e+07 0.00336102 1.54384e+07 6.91816e+06 1.55649e+07 152 1.55707e+07 1.09651e+07 0.00280637 1.55952e+07 50.0393 0.00212533 0.995277 0 50.2041 GTEX-14ASI-0526-SM-5QGQP 1 C1 2 pieces; atrophy with 50% fibrous and fatty replacement in 1, 30% in other 5.7 Muscle Muscle - Skeletal 0011907 1301 1380 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992853 191488 0.974743 0.99432 0.825951 22426 1 76 0.00211443 153 0 7.20506e+07 0.0250233 601697 7.24622e+07 5.00505e+06 22440 3.58972e+07 0 0.148792 0.99432 0.821259 7.20506e+07 0.0030216 1.55493e+07 7.52852e+06 1.56995e+07 165 1.5655e+07 1.32945e+07 0.00256735 1.56927e+07 50.0601 0.0083036 0.995786 0 50.2402 GTEX-14ASI-0526-SM-CYKNX 1 C1 2 pieces; atrophy with 50% fibrous and fatty replacement in 1, 30% in other 5.7 Muscle Muscle - Skeletal 0011907 1301 1380 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 RIP-Seq GTEX-14ASI-0726-SM-5Q5DC 2 C1 2 pieces 7.1 Thyroid Thyroid 0002046 1327 1355 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.982818 216537 0.968831 0.986105 0.818718 24636 1 76 0.00226199 204 0 8.89876e+07 0.0307867 136312 9.02416e+07 1.31095e+07 24659 4.42072e+07 0 0.150113 0.986105 0.807341 8.89876e+07 0.00406673 1.94077e+07 9.89258e+06 1.95599e+07 207 1.95869e+07 1.74242e+07 0.00316135 1.96654e+07 50.1 0.00151052 0.989391 0 50.1952 GTEX-14ASI-0826-SM-5Q5EB 1 C1 2 pieces 6.4 Heart Heart - Atrial Appendage 0006631 1328 1354 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987505 272904 0.974369 0.991211 0.803972 23153 1 76 0.00250374 201 0 9.27752e+07 0.0253164 3.36802e+06 9.35978e+07 1.42145e+07 23175 4.60712e+07 0 0.170397 0.991211 0.796905 9.27752e+07 0.00394615 2.02942e+07 1.08242e+07 2.03846e+07 247 2.04075e+07 1.48863e+07 0.00322225 2.05876e+07 50.2197 0.035984 0.994917 0 50.1111 GTEX-14ASI-1126-SM-5QGPN 1 C1 6 pieces; moderate flat plaques 6.3 Blood Vessel Artery - Aorta 0001496 1332 1351 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.988597 160872 0.96803 0.989903 0.729344 22735 1 76 0.00238355 130 0 6.41513e+07 0.0315804 227575 6.48056e+07 4.39699e+06 22763 3.18838e+07 0 0.238685 0.989903 0.72198 6.41513e+07 0.00349222 1.38636e+07 7.64102e+06 1.3975e+07 146 1.38986e+07 8.98130e+06 0.00293716 1.4031e+07 50.2369 0.00351166 0.991208 0 50.2001 GTEX-14ASI-2926-SM-5Q5DG 2 C1 4 pieces 6.9 Brain Brain - Cerebellum 0002037 1365 1335 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.987917 563110 0.933896 0.990802 0.703095 24354 1 76 0.00262001 156 0 8.69264e+07 0.0657145 1.1737e+06 8.77334e+07 1.2506e+07 24389 4.32074e+07 0 0.230802 0.990802 0.696628 8.69264e+07 0.00407735 1.83853e+07 2.56269e+07 1.86689e+07 198 1.86911e+07 1.04087e+07 0.00334656 1.85984e+07 49.8758 0.013378 0.993688 0 50.3827 GTEX-14ASI-3026-SM-5S2PN 2 C1 4 pieces 6.7 Brain Brain - Cortex 0001870 1368 1333 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993121 351086 0.958534 0.994434 0.820481 23413 1 76 0.00220425 158 0 6.7298e+07 0.041086 2.12219e+06 6.76747e+07 4.04769e+06 23429 3.35109e+07 0 0.138053 0.994434 0.815914 6.7298e+07 0.00302601 1.45244e+07 1.27607e+07 1.49281e+07 187 1.48429e+07 8.28944e+06 0.00261459 1.46882e+07 49.7381 0.0313586 0.995747 0 50.6854 GTEX-14B4R-0004-SM-5CV95 B1 Blood Whole Blood 0013756 -324 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14B4R-0004-SM-7DRQ2 B1 Blood Whole Blood 0013756 -324 BP-46273 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14B4R-0006-SM-5O9A7 B1 7.6 Blood Whole Blood 0013756 -324 BP-46281 RNA isolation_PAXgene Blood RNA (Manual) 11/27/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.981439 790122 0.948088 0.985574 0.76259 19952 1 76 0.00251879 143 0 9.08676e+07 0.051195 201872 9.21977e+07 1.24668e+07 19974 4.50928e+07 0 0.185498 0.985574 0.751589 9.08676e+07 0.00448086 1.93974e+07 5.80463e+07 1.97349e+07 166 1.97265e+07 1.78733e+07 0.00349571 1.97842e+07 50.0731 0.00218956 0.989708 0 50.4312 GTEX-14B4R-0126-SM-5TDE4 1 B1 2 pieces; one piece is up to 20% fat/vessels 7.1 Thyroid Thyroid 0002046 204 1139 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988827 263716 0.969633 0.992051 0.764952 24311 1 76 0.00234785 166 0 8.1829e+07 0.0300929 256031 8.24847e+07 1.03378e+07 24349 4.06776e+07 0 0.204681 0.992051 0.758872 8.1829e+07 0.0040641 1.7924e+07 8.22411e+06 1.80428e+07 184 1.80723e+07 1.32989e+07 0.00320319 1.81448e+07 50.1 0.00310398 0.995275 0 50.1652 GTEX-14B4R-0226-SM-5TDDO 1 B1 6 pieces; mild atherosclerosis 6.3 Blood Vessel Artery - Aorta 0001496 218 1125 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.9847 246347 0.974783 0.989963 0.835428 21428 1 76 0.0021717 144 0 6.5509e+07 0.0249213 346585 6.61732e+07 8.67926e+06 21440 3.2459e+07 0 0.139355 0.989963 0.827043 6.5509e+07 0.00447376 1.41099e+07 5.89293e+06 1.42108e+07 156 1.4218e+07 1.20144e+07 0.00331661 1.44336e+07 50.3762 0.00523755 0.995227 0 50.1781 GTEX-14B4R-0326-SM-5TDDP 0 B1 6 pieces; includes several clusters of submucosal glands 9.6 Esophagus Esophagus - Mucosa 0006920 217 1126 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987773 287894 0.97855 0.991565 0.849388 22372 1 76 0.00234317 212 0 8.45397e+07 0.0210286 466037 8.52589e+07 1.06222e+07 22388 4.20102e+07 0 0.129162 0.991565 0.842223 8.45397e+07 0.00401235 1.90056e+07 1.10623e+07 1.90442e+07 211 1.90981e+07 1.77871e+07 0.00317457 1.92664e+07 50.2193 0.00546614 0.995358 0 50.0508 GTEX-14B4R-0426-SM-5Q5EI 0 B1 6 pieces; well trimmed 8.5 Esophagus Esophagus - Muscularis 0004648 224 1119 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990439 145757 0.976316 0.993345 0.832196 22255 1 76 0.00217392 212 0 7.9893e+07 0.023406 884044 8.04283e+07 1.10671e+07 22272 3.97574e+07 0 0.14412 0.993345 0.826657 7.9893e+07 0.00350752 1.71865e+07 8.13476e+06 1.73072e+07 233 1.72732e+07 1.38524e+07 0.00283877 1.74313e+07 50.2278 0.0109917 0.996251 0 50.1749 GTEX-14B4R-0526-SM-5QGQT 0 B1 2 pieces 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 229 1114 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992923 140024 0.973862 0.994315 0.839394 21849 1 76 0.0018844 137 0 5.59567e+07 0.0259002 518197 5.62766e+07 3.82823e+06 21861 2.78747e+07 0 0.134469 0.994315 0.834622 5.59567e+07 0.00282053 1.22652e+07 5.56905e+06 1.23633e+07 150 1.22795e+07 9.20491e+06 0.00235181 1.24276e+07 50.2997 0.00920804 0.995708 0 50.199 GTEX-14B4R-0626-SM-5TDDQ 0 B1 6 pieces; free of mucosa, some larger vessels present 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 241 1102 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98768 214014 0.973524 0.991712 0.811099 23042 1 76 0.00232083 206 0 7.98835e+07 0.0262427 872396 8.05511e+07 9.82392e+06 23066 3.969e+07 0 0.162425 0.991712 0.804377 7.98835e+07 0.00412899 1.72622e+07 7.51676e+06 1.74261e+07 211 1.74232e+07 1.25102e+07 0.00322124 1.7567e+07 50.2055 0.0108303 0.995745 0 50.2363 GTEX-14B4R-0726-SM-5TDDR 1 B1 5 pieces; full thickness sections, but 2 include only small portion of mucosa 7.5 Stomach Stomach 0000945 236 1107 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.977059 179940 0.983589 0.98097 0.871633 21504 1 76 0.002459 303 0 7.44084e+07 0.0157408 916457 7.58518e+07 9.71211e+06 21517 3.6956e+07 0 0.111956 0.98097 0.855046 7.44084e+07 0.00440182 1.69768e+07 9.95145e+07 1.75803e+07 215 1.75748e+07 2.05818e+07 0.00342654 1.72703e+07 49.563 0.0120822 0.984881 0 50.8732 GTEX-14B4R-1026-SM-5TDDS 0 B1 2 pieces; spermatogenesis is present, portion of tunica albuginea present 7.1 Testis Testis 0000473 252 1091 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98621 447620 0.928319 0.990128 0.739297 32565 1 76 0.00242278 146 0 7.84346e+07 0.0714039 1.28795e+06 7.92165e+07 9.65086e+06 32620 3.8961e+07 0 0.189022 0.990128 0.731999 7.84346e+07 0.00432565 1.63737e+07 1.78093e+07 1.65186e+07 163 1.65687e+07 1.20641e+07 0.00337045 1.66071e+07 50.0578 0.0162586 0.994047 0 50.2203 GTEX-14B4R-1226-SM-5TDDT 0 B1 2 pieces; adipose tissue only 7.1 Breast Breast - Mammary Tissue 0008367 254 1089 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.984325 254510 0.971667 0.98881 0.818389 22778 1 76 0.00244153 150 0 6.78809e+07 0.0280777 489159 6.86491e+07 8.22232e+06 22796 3.36804e+07 0 0.153277 0.98881 0.809232 6.78809e+07 0.00461194 1.48397e+07 7.61872e+06 1.48823e+07 168 1.4888e+07 1.0751e+07 0.00352182 1.51245e+07 50.3941 0.0071255 0.993295 0 50.0716 GTEX-14B4R-1326-SM-5Q5EZ 1 B1 6 pieces; includes from 0-20% internal and external fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 260 1083 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.991487 182623 0.969763 0.993702 0.782549 24009 1 76 0.00216627 227 0 8.50216e+07 0.0300338 581449 8.55604e+07 1.05621e+07 24040 4.23195e+07 0 0.187214 0.993702 0.77762 8.50216e+07 0.00348851 1.85912e+07 9.7044e+06 1.87623e+07 220 1.87091e+07 1.39542e+07 0.00282592 1.88226e+07 50.1512 0.00679577 0.995917 0 50.229 GTEX-14B4R-1426-SM-5Q5CG 0 B1 2 pieces; excellent specimen, one piece does include 20% attachment of lip and skeletal muscle 8 Salivary Gland Minor Salivary Gland 0006330 265 1078 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.985612 252867 0.971864 0.987903 0.798454 23156 1 76 0.00247302 174 0 7.15951e+07 0.0261475 195381 7.24718e+07 5.45866e+06 23179 3.55585e+07 0 0.17341 0.987903 0.788795 7.15951e+07 0.00354165 1.63074e+07 2.24463e+07 1.6308e+07 180 1.63318e+07 1.16111e+07 0.00300609 1.64482e+07 50.1775 0.00269596 0.990194 0 50.0009 GTEX-14B4R-2026-SM-5QGQL 1 B1 2 pieces; focal minimal intimal thickening 6.2 Blood Vessel Artery - Tibial 0007610 297 1046 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.992525 275013 0.973552 0.993647 0.821944 19965 1 76 0.00193547 126 0 5.67574e+07 0.0261302 331249 5.71203e+07 3.7855e+06 19977 2.82373e+07 0 0.151608 0.993647 0.816722 5.67574e+07 0.00296366 1.21504e+07 4.82204e+06 1.22051e+07 144 1.21614e+07 9.81622e+06 0.00244898 1.22604e+07 50.2027 0.00579914 0.994769 0 50.1122 GTEX-14BIL-0004-SM-5DU4U B1 Blood Whole Blood 0013756 617 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14BIL-0004-SM-7DRO6 B1 Blood Whole Blood 0013756 617 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14BIL-0006-SM-5N9F2 B1 8.9 Blood Whole Blood 0013756 617 BP-46330 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.974955 2.04546e+06 0.941742 0.976572 0.765396 17841 1 76 0.00427465 109 0 9.90305e+07 0.0571898 293081 1.01406e+08 5.13332e+06 17845 4.92277e+07 0 0.176346 0.976572 0.747465 9.90305e+07 0.00427964 2.24031e+07 1.772e+08 2.27534e+07 148 2.27389e+07 2.5642e+07 0.00427714 2.26378e+07 49.8886 0.00289017 0.978189 0 50.3879 GTEX-14BIL-0011-R10a-SM-5SI75 B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 622 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989513 569816 0.954706 0.992751 0.822531 23846 1 76 0.002068 269 0 7.76078e+07 0.0449168 3.08221e+06 7.81745e+07 8.20797e+06 23863 3.85966e+07 0 0.132175 0.992751 0.816568 7.76078e+07 0.00321046 1.67803e+07 1.93174e+07 1.69903e+07 263 1.69852e+07 9.1493e+06 0.00263736 1.70158e+07 50.0449 0.0394273 0.995989 0 50.3108 GTEX-14BIL-0011-R10a-SM-AHZ7B B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 622 ChIP-Seq GTEX-14BIL-0011-R10a-SM-CYKOB B1, A1 8.7 Brain Brain - Frontal Cortex (BA9) 0009834 622 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 RIP-Seq GTEX-14BIL-0011-R8b-SM-69LQK B1, A1 5.9 Brain Brain - Hypothalamus 0001898 622 BP-50015 RNA isolation_PAXgene Tissue miRNA 02/28/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992609 698702 0.952483 0.993984 0.805294 23250 1 76 0.00215449 266 0 7.61701e+07 0.0473331 6.12974e+06 7.66312e+07 4.44507e+06 23267 3.79609e+07 0 0.147189 0.993984 0.800449 7.61701e+07 0.00292539 1.63975e+07 3.5303e+07 1.65743e+07 293 1.63027e+07 5.40332e+06 0.00253941 1.67708e+07 50.7076 0.0799901 0.995359 0 50.2681 GTEX-14BIL-0011-R9a-SM-5SI7A B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 622 BP-48815 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991197 482736 0.957766 0.993634 0.795951 23896 1 76 0.00199321 229 0 8.03677e+07 0.0417974 1.15498e+06 8.08826e+07 7.96525e+06 23921 3.99888e+07 0 0.161816 0.993634 0.790883 8.03677e+07 0.0031274 1.76983e+07 1.27844e+07 1.79885e+07 220 1.79086e+07 1.26352e+07 0.00255891 1.79698e+07 50.0853 0.0142798 0.996071 0 50.4065 GTEX-14BIL-0126-SM-5SI92 1 B1 6 pieces; well trimmed; 10% dermal fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 759 847 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990835 242728 0.973929 0.993323 0.790854 24823 1 76 0.00199008 296 0 9.89473e+07 0.0257834 565049 9.96124e+07 9.85268e+06 24859 4.92465e+07 0 0.183075 0.993323 0.785573 9.89473e+07 0.00301585 2.16148e+07 1.12337e+07 2.17844e+07 279 2.18011e+07 1.79924e+07 0.00250168 2.18345e+07 50.0383 0.00567248 0.995811 0 50.1954 GTEX-14BIL-0226-SM-5SI9E 1 B1 2 pieces; overly large specimen with compression artifacts 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 760 846 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990053 256958 0.971947 0.992883 0.788074 24407 1 76 0.00204294 284 0 1.0481e+08 0.0277456 609890 1.05562e+08 1.03846e+07 24441 5.21465e+07 0 0.183873 0.992883 0.782465 1.0481e+08 0.00316213 2.2898e+07 1.22982e+07 2.30967e+07 295 2.31243e+07 1.89595e+07 0.00260094 2.31549e+07 50.033 0.00577757 0.995714 0 50.216 GTEX-14BIL-0326-SM-5SI9Q 0 B1 2 pieces; fragmented; 1 with 5% internal fat 8.4 Muscle Muscle - Skeletal 0011907 761 845 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.992795 225867 0.984803 0.994884 0.880732 20105 1 76 0.00178971 272 0 9.66951e+07 0.0149375 892566 9.71924e+07 1.04298e+07 20116 4.81709e+07 0 0.104071 0.994884 0.876225 9.66951e+07 0.00267638 2.10903e+07 1.17801e+07 2.11749e+07 264 2.1136e+07 2.213e+07 0.00223211 2.1321e+07 50.2179 0.0091835 0.996973 0 50.1001 GTEX-14BIL-0326-SM-CYKR6 0 B1 2 pieces; fragmented; 1 with 5% internal fat 8.4 Muscle Muscle - Skeletal 0011907 761 845 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 RIP-Seq GTEX-14BIL-0426-SM-5SIA3 0 B1 2 pieces; well trimmed 7.1 Nerve Nerve - Tibial 0001323 762 844 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991236 313326 0.961649 0.993181 0.769406 23495 1 76 0.00200102 154 0 6.90377e+07 0.0380508 297161 6.95117e+07 7.04404e+06 23528 3.43662e+07 0 0.192242 0.993181 0.76416 6.90377e+07 0.00307199 1.50287e+07 1.31949e+07 1.5187e+07 156 1.51582e+07 1.19812e+07 0.00253545 1.5191e+07 50.0541 0.00427498 0.995127 0 50.2618 GTEX-14BIL-0926-SM-7DHKN 0 B1 2 pieces; 1 piece has 60% external fat, other has 10% external fibrofatty content 6.9 Heart Heart - Atrial Appendage 0006631 812 794 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988616 146318 0.977371 0.989307 0.829705 22729 1 76 0.00355258 149 0 7.23925e+07 0.0223865 1.51606e+06 7.3175e+07 6.07617e+06 22745 3.59879e+07 0 0.147666 0.989307 0.820833 7.23925e+07 0.00551147 1.58348e+07 8.09474e+06 1.60259e+07 170 1.6018e+07 1.22386e+07 0.00453134 1.58892e+07 49.7982 0.0207182 0.989997 0 50.2999 GTEX-14BIL-1126-SM-79OMC 1 B1 2 pieces; 1 with 40% external fat; hypereosinophilic areas consistent with ischemia 5.9 Heart Heart - Left Ventricle 0006566 819 787 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.986662 64704 0.988702 0.986886 0.889495 17464 1 76 0.00337998 182 0 5.76855e+07 0.0112489 4.70347e+06 5.8452e+07 3.48558e+06 17468 2.8744e+07 0 0.0992074 0.986886 0.87783 5.76855e+07 0.00461858 1.29034e+07 1.29868e+07 1.32262e+07 206 1.30132e+07 2.43932e+06 0.00399914 1.30931e+07 50.153 0.0804671 0.98711 0 50.6177 GTEX-14BIL-1126-SM-CYKT7 1 B1 2 pieces; 1 with 40% external fat; hypereosinophilic areas consistent with ischemia 5.9 Heart Heart - Left Ventricle 0006566 819 787 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14BIL-1226-SM-79OME 2 B1 2 pieces; congested, emphysema, foci of hemorrhage 6.8 Lung Lung 0008952 820 786 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.990691 115969 0.971585 0.990186 0.773697 22620 1 76 0.00329685 119 0 5.49835e+07 0.0281325 583146 5.55284e+07 3.57569e+06 22643 2.73443e+07 0 0.197888 0.990186 0.766104 5.49835e+07 0.00459882 1.21947e+07 5.36573e+06 1.22274e+07 130 1.22225e+07 7.87788e+06 0.00394816 1.21737e+07 49.9 0.0105018 0.98968 0 50.0668 GTEX-14BIL-1326-SM-79OMR 1 B1 2 pieces; central congestion 6.6 Liver Liver 0001114 821 785 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993218 142636 0.975453 0.993293 0.817537 21122 1 76 0.00321531 128 0 6.58336e+07 0.0243144 1.30094e+06 6.62781e+07 3.89108e+06 21136 3.27924e+07 0 0.157916 0.993293 0.812054 6.58336e+07 0.00441166 1.43147e+07 8.05269e+06 1.44929e+07 153 1.44585e+07 1.03887e+07 0.00381344 1.43477e+07 49.8078 0.0196284 0.993368 0 50.3092 GTEX-14BIL-1826-SM-7DUEO 1 B1 6 pieces; well dissected 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 832 774 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.984573 131260 0.969542 0.984979 0.823476 22706 1 76 0.00306153 159 0 7.13391e+07 0.0302668 3.132e+06 7.2427e+07 7.16486e+06 22731 3.54758e+07 0 0.146066 0.984979 0.811107 7.13391e+07 0.004539 1.56656e+07 7.55257e+06 1.59386e+07 196 1.5924e+07 8.75813e+06 0.00379996 1.57095e+07 49.6609 0.0432435 0.985386 0 50.432 GTEX-14BIL-1926-SM-73KYI 2 B1 6 pieces 6.8 Stomach Stomach 0000945 833 773 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.983089 157489 0.983087 0.98506 0.850657 21157 1 76 0.00254082 326 0 6.97458e+07 0.0166178 1.22977e+06 7.08036e+07 7.23962e+06 21172 3.47145e+07 0 0.132429 0.98506 0.837949 6.97458e+07 0.0033818 1.61617e+07 1.02755e+08 1.65777e+07 217 1.65828e+07 1.98022e+07 0.00296047 1.62992e+07 49.5687 0.0173687 0.98703 0 50.6354 GTEX-14BIL-2126-SM-73KW3 3 B1 2 pieces; glands autolyzed, stroma intact 6.3 Prostate Prostate 0002367 836 770 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988698 279863 0.966166 0.989739 0.759699 25634 1 76 0.00439741 374 0 1.13499e+08 0.0335211 1.66086e+06 1.14675e+08 5.50804e+06 25674 5.64308e+07 0 0.206467 0.989739 0.751904 1.13499e+08 0.00467931 2.51348e+07 1.38259e+07 2.54682e+07 332 2.54396e+07 1.35954e+07 0.00453821 2.5285e+07 49.8476 0.0144832 0.990781 0 50.3295 GTEX-14BIL-2226-SM-73KWF 2 B1 2 pieces; spermatogenesis 6.8 Testis Testis 0000473 837 769 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991269 369969 0.92207 0.992067 0.705471 35343 1 76 0.00416976 284 0 1.17461e+08 0.0775776 1.00473e+06 1.184e+08 5.26058e+06 35427 5.85109e+07 0 0.216599 0.992067 0.699874 1.17461e+08 0.00384084 2.42501e+07 1.82785e+07 2.4493e+07 259 2.45435e+07 1.87957e+07 0.00400543 2.42876e+07 49.738 0.00848592 0.992864 0 50.2492 GTEX-14BIL-2426-SM-5QGQR 0 B1 2 pieces 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 841 765 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991013 176994 0.978204 0.99261 0.814297 22364 1 76 0.00204835 144 0 6.38309e+07 0.02147 842033 6.43061e+07 4.24875e+06 22377 3.17656e+07 0 0.163906 0.99261 0.808279 6.38309e+07 0.00307847 1.41959e+07 7.98774e+06 1.42542e+07 162 1.41879e+07 1.03125e+07 0.00256258 1.43673e+07 50.3141 0.0130941 0.994206 0 50.1024 GTEX-14BIL-2926-SM-5SIAF 2 B1 1 piece; 80% anterior; 20% posterior [annotated] 7 Pituitary Pituitary 0000007 880 726 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.989899 411320 0.96042 0.993128 0.782418 25000 1 76 0.00199961 204 0 8.3486e+07 0.0393346 366860 8.40637e+07 8.29542e+06 25035 4.15183e+07 0 0.178002 0.993128 0.777041 8.3486e+07 0.00317096 1.70124e+07 1.42111e+07 1.71553e+07 211 1.72074e+07 1.44145e+07 0.00258338 1.72048e+07 49.9963 0.00436407 0.996357 0 50.2091 GTEX-14BIL-3026-SM-7EWD4 2 B1 2 pieces 7.2 Brain Brain - Cortex 0001870 882 724 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992554 379704 0.961412 0.994415 0.828693 23173 1 76 0.00246746 267 0 7.50993e+07 0.0382387 4.12261e+06 7.55211e+07 6.3046e+06 23186 3.74028e+07 0 0.132719 0.994415 0.824065 7.50993e+07 0.0035252 1.63385e+07 2.09348e+07 1.65632e+07 256 1.65183e+07 7.97366e+06 0.00299534 1.65104e+07 49.988 0.0545889 0.996276 0 50.3415 GTEX-14BIM-0002-SM-5DU5L B1 Blood Whole Blood 0013756 1210 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14BIM-0002-SM-7DROA B1 Blood Whole Blood 0013756 1210 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14BIM-0006-SM-5O9AA B1 7.3 Blood Whole Blood 0013756 1210 BP-46330 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.987377 1.15425e+06 0.940439 0.990263 0.74285 18679 1 76 0.00239418 122 0 6.95782e+07 0.0591923 585305 7.02624e+07 9.18153e+06 18690 3.45822e+07 0 0.19759 0.990263 0.735617 6.95782e+07 0.0041067 1.50764e+07 6.57733e+07 1.52399e+07 132 1.52404e+07 1.31859e+07 0.00324795 1.53156e+07 50.1231 0.00833027 0.993149 0 50.2697 GTEX-14BIM-0011-R10a-SM-AHZ7A B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1045 ChIP-Seq GTEX-14BIM-0011-R11b-SM-5S2RN B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 1045 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991136 464510 0.928992 0.992276 0.68532 22493 1 76 0.00212576 111 0 5.60919e+07 0.0706525 1.0222e+06 5.65285e+07 3.23197e+06 22512 2.79199e+07 0 0.243672 0.992276 0.680026 5.60919e+07 0.00283757 1.18238e+07 1.63777e+07 1.20292e+07 129 1.19878e+07 5.78431e+06 0.00248126 1.19293e+07 49.8777 0.0180828 0.993416 0 50.4305 GTEX-14BIM-0011-R1a-SM-69LQI B1, A1 5.7 Brain Brain - Hippocampus 0001954 1045 BP-50015 RNA isolation_PAXgene Tissue miRNA 02/28/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993113 692056 0.95112 0.994536 0.820314 21836 1 76 0.00230349 367 0 7.87566e+07 0.0487636 8.90552e+06 7.91893e+07 4.97115e+06 21850 3.9242e+07 0 0.130806 0.994536 0.815832 7.87566e+07 0.00317202 1.71415e+07 3.70004e+07 1.7109e+07 337 1.68264e+07 3.8714e+06 0.00273713 1.7528e+07 51.0211 0.112459 0.995958 0 49.9525 GTEX-14BIM-0011-R2b-SM-69LQ6 B1, A1 5.8 Brain Brain - Substantia nigra 0002038 1045 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992128 485352 0.964832 0.993607 0.871927 21564 1 76 0.00213206 269 0 7.56512e+07 0.0349944 7.06738e+06 7.6138e+07 4.4206e+06 21576 3.769e+07 0 0.0929046 0.993607 0.866353 7.56512e+07 0.0029995 1.6693e+07 1.90262e+07 1.69094e+07 291 1.66024e+07 7.56434e+06 0.00256514 1.71099e+07 50.7526 0.0928233 0.995085 0 50.3219 GTEX-14BIM-0011-R3b-SM-5S2RL B1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1045 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993656 467873 0.946344 0.994687 0.817219 22282 1 76 0.00189848 124 0 5.20005e+07 0.0532892 2.59805e+06 5.22783e+07 2.95703e+06 22294 2.5905e+07 0 0.129126 0.994687 0.812877 5.20005e+07 0.00264175 1.12065e+07 1.49828e+07 1.13817e+07 145 1.13311e+07 6.02524e+06 0.00226973 1.13114e+07 49.9565 0.0496966 0.995718 0 50.3879 GTEX-14BIM-0011-R4b-SM-5S2RK B1, A1 6.8 Brain Brain - Amygdala 0001876 1045 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992545 557667 0.946559 0.993711 0.824128 21885 1 76 0.00210368 142 0 5.53926e+07 0.0532559 6.23558e+06 5.57432e+07 3.03235e+06 21895 2.75897e+07 0 0.122431 0.993711 0.818945 5.53926e+07 0.00300621 1.19327e+07 2.12838e+07 1.22268e+07 171 1.21127e+07 4.46005e+06 0.00255442 1.21119e+07 49.9985 0.111863 0.994877 0 50.6085 GTEX-14BIM-0011-R5b-SM-5S2RM B1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 1045 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992961 614535 0.940728 0.994163 0.79284 22892 1 76 0.00200024 128 0 5.68642e+07 0.0589633 3.1287e+06 5.7198e+07 3.37892e+06 22907 2.83192e+07 0 0.147888 0.994163 0.788212 5.68642e+07 0.00275919 1.21021e+07 1.94633e+07 1.24071e+07 154 1.23116e+07 6.24702e+06 0.00237926 1.22663e+07 49.908 0.0546995 0.995365 0 50.6221 GTEX-14BIM-0011-R6b-SM-5S2VB B1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1045 BP-48831 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991715 942860 0.940857 0.993638 0.794024 24270 1 76 0.00217035 268 0 8.67388e+07 0.0587547 5.0594e+06 8.72942e+07 9.26383e+06 24293 4.31903e+07 0 0.146832 0.993638 0.788973 8.67388e+07 0.00314848 1.85913e+07 3.36374e+07 1.87011e+07 270 1.86517e+07 9.79916e+06 0.00265847 1.88189e+07 50.2231 0.057958 0.995561 0 50.1472 GTEX-14BIM-0011-R9a-SM-6LLJL B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 1045 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975824 798335 0.945409 0.984725 0.808421 23840 1 76 0.00264261 286 0 8.53224e+07 0.0542807 3.13829e+06 8.66459e+07 7.55722e+06 23857 4.21543e+07 0 0.136988 0.984725 0.796073 8.53224e+07 0.00412574 1.84649e+07 2.34901e+07 1.86525e+07 265 1.87731e+07 1.08936e+07 0.00337747 1.90806e+07 50.4061 0.0362197 0.993627 0 50.2526 GTEX-14BIM-0226-SM-7IGLD 0 B1 6 pieces, minimal adherent dermal fat; squamous epithelium is ~50microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1143 592 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994643 209186 0.973383 0.995377 0.787446 25198 1 76 0.00209301 213 0 9.11525e+07 0.0263816 860667 9.15758e+07 5.33656e+06 25227 4.54413e+07 0 0.185937 0.995377 0.783806 9.11525e+07 0.00292125 2.00875e+07 1.06857e+07 2.0259e+07 234 2.02111e+07 1.54953e+07 0.00250682 2.0206e+07 49.9937 0.00939841 0.996112 0 50.2126 GTEX-14BIM-0326-SM-5SI9B 0 B1 6 pieces, some fibers appear mildly atrophied. Minimal interstitial fat, ~5-10% 7.9 Muscle Muscle - Skeletal 0011907 1144 591 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988554 275869 0.979381 0.991595 0.85593 20694 1 76 0.00183384 274 0 9.46263e+07 0.0204276 1.97875e+06 9.54283e+07 8.84252e+06 20708 4.70722e+07 0 0.123451 0.991595 0.848736 9.46263e+07 0.00302849 2.08729e+07 1.01912e+07 2.08922e+07 265 2.09179e+07 1.8845e+07 0.00242933 2.11168e+07 50.2366 0.0207354 0.994637 0 50.0231 GTEX-14BIM-0426-SM-5SI9N 0 B1 2 pieces, clean sections 5.9 Nerve Nerve - Tibial 0001323 1145 590 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.988691 261661 0.967165 0.991521 0.725852 24027 1 76 0.0021236 160 0 7.6655e+07 0.0325589 416870 7.73105e+07 7.66303e+06 24063 3.8088e+07 0 0.241313 0.991521 0.719698 7.6655e+07 0.00357365 1.67952e+07 1.02836e+07 1.69451e+07 168 1.69289e+07 1.15921e+07 0.00284655 1.70268e+07 50.1441 0.00539215 0.994351 0 50.2221 GTEX-14BIM-0826-SM-5Q5BM 1 B1 2 pieces, end-stage Hashimoto's thyroiditis with prominent regressive change, ~20% adherent fat, delineated 6.9 Thyroid Thyroid 0002046 1207 528 BP-48068 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2014 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.98662 204577 0.963435 0.989357 0.731303 24245 1 76 0.00253165 124 0 6.21920e+07 0.0352167 326195 6.28611e+07 4.4325e+06 24272 3.08556e+07 0 0.232132 0.989357 0.723519 6.21920e+07 0.00366367 1.36554e+07 8.63094e+06 1.37154e+07 133 1.37334e+07 9.6944e+06 0.00309609 1.38077e+07 50.1349 0.00518914 0.992093 0 50.1096 GTEX-14BIM-1226-SM-5SIBC 1 B1 6 pieces, all target muscularis 6.6 Esophagus Esophagus - Muscularis 0004648 1248 487 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.991158 184084 0.973768 0.99324 0.818954 22424 1 76 0.00197514 158 0 7.15454e+07 0.0259892 1.06789e+06 7.20324e+07 7.11489e+06 22446 3.56032e+07 0 0.154814 0.99324 0.813417 7.15454e+07 0.00311414 1.56645e+07 7.60176e+06 1.57254e+07 177 1.56773e+07 1.19862e+07 0.00254344 1.58586e+07 50.2875 0.0148252 0.995321 0 50.097 GTEX-14BIM-1326-SM-7EWD1 3 B1 6 pieces, squamous mucosa sloughling, unusually poorly preserved, residual basal portions less than ~0.1mm 6.7 Esophagus Esophagus - Mucosa 0006920 1251 484 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.9912 131741 0.970787 0.993069 0.773193 22896 1 76 0.00243727 123 0 6.0152e+07 0.0290059 378600 6.05718e+07 5.24284e+06 22916 2.99564e+07 0 0.197593 0.993069 0.767834 6.0152e+07 0.00350728 1.33644e+07 7.64289e+06 1.3485e+07 138 1.34974e+07 9.51955e+06 0.00297127 1.34615e+07 49.9335 0.00625043 0.994938 0 50.2245 GTEX-14BIM-1626-SM-7EWD2 1 B1 2 pieces, minimal interstital fascia/vascular elements 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1259 476 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.988599 95769 0.977446 0.990516 0.85549 21199 1 76 0.00234069 138 0 5.6961e+07 0.0222025 1.10003e+06 5.75064e+07 4.94264e+06 21212 2.83354e+07 0 0.121956 0.990516 0.847376 5.6961e+07 0.00354955 1.24959e+07 8.2807e+06 1.26016e+07 146 1.2603e+07 1.10737e+07 0.00294395 1.26027e+07 49.9995 0.0191288 0.992433 0 50.2105 GTEX-14BIM-2226-SM-5SI8Y 1 B1 2 pieces, myometrium 6.9 Uterus Uterus 0000995 1273 462 BP-47656 RNA Extraction from Paxgene-derived Lysate Plate Based 12/19/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990827 183431 0.969265 0.993121 0.764671 23477 1 76 0.00202193 175 0 8.35889e+07 0.0304345 302238 8.41679e+07 7.72243e+06 23507 4.15693e+07 0 0.204595 0.993121 0.75941 8.35889e+07 0.00310659 1.82109e+07 1.09347e+07 1.84185e+07 193 1.83813e+07 1.46943e+07 0.00256301 1.84416e+07 50.082 0.00359089 0.995415 0 50.2833 GTEX-14BIM-2626-SM-5S2OF 1 B1 6 pieces, minimal atherosis 6 Blood Vessel Artery - Aorta 0001496 1289 446 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991503 152362 0.97566 0.993251 0.818768 20625 1 76 0.00188651 137 0 6.32119e+07 0.023935 127466 6.36414e+07 4.46944e+06 20638 3.14267e+07 0 0.156892 0.993251 0.813243 6.32119e+07 0.00273333 1.35788e+07 6.31092e+06 1.36949e+07 149 1.36428e+07 1.20108e+07 0.00230918 1.3744e+07 50.1848 0.00200288 0.994999 0 50.2127 GTEX-14BIM-2726-SM-5Q5EG 1 B1 2 pieces, no abnormalities, ~60% interstitial/ adherent fat, rep delineated 6 Heart Heart - Atrial Appendage 0006631 1292 443 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988899 239180 0.976937 0.99264 0.852653 20910 1 76 0.00216472 148 0 6.84544e+07 0.0228438 2.9332e+06 6.8962e+07 1.03292e+07 20918 3.39981e+07 0 0.124284 0.99264 0.846378 6.84544e+07 0.00397967 1.47327e+07 1.01085e+07 1.46647e+07 174 1.46823e+07 1.13384e+07 0.00306878 1.49466e+07 50.4459 0.0425336 0.996381 0 49.8843 GTEX-14BIM-3026-SM-7EWCY 1 B1 2 pieces, no abnormalties 6.3 Brain Brain - Cortex 0001870 1305 430 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992844 111609 0.965887 0.994595 0.833943 22975 1 76 0.00245119 123 0 5.45796e+07 0.0337218 2.16128e+06 5.48762e+07 4.67344e+06 22988 2.71844e+07 0 0.131944 0.994595 0.829435 5.45796e+07 0.00343795 1.2038e+07 5.49514e+06 1.21571e+07 143 1.21441e+07 7.21163e+06 0.0029437 1.21353e+07 49.9818 0.0393847 0.996346 0 50.2462 GTEX-14BIM-3026-SM-CYKU4 1 B1 2 pieces, no abnormalties 6.3 Brain Brain - Cortex 0001870 1305 430 BP-48137 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14BIM-3126-SM-5Q5C7 1 B1 2 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 1303 432 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.988902 319448 0.949405 0.991095 0.729178 24137 1 76 0.00219406 199 0 8.61282e+07 0.0501888 1.58338e+06 8.6902e+07 6.76996e+06 24167 4.28331e+07 0 0.220228 0.991095 0.722685 8.61282e+07 0.00312775 1.85826e+07 1.20409e+07 1.87754e+07 242 1.87544e+07 1.0281e+07 0.00265987 1.87806e+07 50.0349 0.0182203 0.993289 0 50.2582 GTEX-14BIM-3226-SM-5RQIQ 1 B1 1 piece, all adenohypophysis 7.1 Pituitary Pituitary 0000007 1302 433 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990686 262537 0.966869 0.991964 0.792024 24174 1 76 0.00212629 130 0 6.03456e+07 0.0328575 341943 6.08345e+07 3.13394e+06 24195 3.00067e+07 0 0.174845 0.991964 0.785659 6.03456e+07 0.0030819 1.29128e+07 6.43969e+06 1.29675e+07 143 1.2944e+07 1.09495e+07 0.00260348 1.30164e+07 50.1395 0.00562087 0.993242 0 50.1058 GTEX-14BIN-0004-SM-5CV9N B1 Blood Whole Blood 0013756 826 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14BIN-0004-SM-7DROI B1 Blood Whole Blood 0013756 826 BP-46329 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14BIN-0005-SM-5N9FE B1 8.8 Blood Whole Blood 0013756 826 BP-46330 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987817 1.07068e+06 0.95449 0.98934 0.719481 21100 1 76 0.00451256 131 0 7.76584e+07 0.044981 211794 7.84952e+07 3.77944e+06 21123 3.85656e+07 0 0.235009 0.98934 0.711811 7.76584e+07 0.0045345 1.71477e+07 4.51133e+07 1.72034e+07 139 1.72216e+07 1.38968e+07 0.00452351 1.72719e+07 50.0728 0.00269818 0.990862 0 50.0812 GTEX-14BIN-0011-R10a-SM-5S2UA B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 821 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992782 845841 0.954009 0.994336 0.845351 23406 1 76 0.00179263 371 0 9.40138e+07 0.0456435 4.19323e+06 9.45493e+07 8.37017e+06 23422 4.6836e+07 0 0.108658 0.994336 0.840563 9.40138e+07 0.00268935 2.03649e+07 2.59065e+07 2.05426e+07 339 2.04242e+07 1.06868e+07 0.00224029 2.06297e+07 50.2504 0.0443497 0.995889 0 50.2172 GTEX-14BIN-0011-R10a-SM-AHZ79 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 821 ChIP-Seq GTEX-14BIN-0011-R10a-SM-CYKQL B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 821 BP-48687 RNA isolation_PAXgene Tissue miRNA 01/27/2014 RIP-Seq GTEX-14BIN-0011-R11a-SM-5SI79 B1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 821 BP-48831 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989422 579844 0.943533 0.992226 0.745302 23230 1 76 0.00207705 156 0 7.38095e+07 0.0561493 2.05446e+06 7.43878e+07 7.348e+06 23260 3.66936e+07 0 0.198232 0.992226 0.739508 7.38095e+07 0.00336569 1.58001e+07 1.6963e+07 1.59919e+07 201 1.59682e+07 7.46726e+06 0.00271955 1.60221e+07 50.0842 0.0276182 0.995031 0 50.3016 GTEX-14BIN-0011-R2a-SM-5S2RJ B1, A1 6.4 Brain Brain - Substantia nigra 0002038 821 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992327 284361 0.965168 0.993275 0.839369 21386 1 76 0.00161741 197 0 6.31349e+07 0.0347049 5.7992e+06 6.35623e+07 3.31572e+06 21393 3.14537e+07 0 0.125799 0.993275 0.833725 6.31349e+07 0.00235137 1.37921e+07 1.96439e+07 1.40219e+07 248 1.37538e+07 4.03727e+06 0.00198404 1.40939e+07 50.6107 0.0912363 0.994224 0 50.413 GTEX-14BIN-0011-R3b-SM-6AJBL B1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 821 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991021 776633 0.948087 0.993287 0.826165 22961 1 76 0.00188106 268 0 7.62473e+07 0.0515532 4.3983e+06 7.67626e+07 5.53914e+06 22971 3.79615e+07 0 0.121922 0.993287 0.820619 7.62473e+07 0.00280461 1.63144e+07 3.07135e+07 1.65369e+07 281 1.64717e+07 8.4989e+06 0.00234178 1.65538e+07 50.1242 0.0572974 0.995553 0 50.3385 GTEX-14BIN-0011-R5b-SM-5SI78 B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 821 BP-48831 RNA isolation_PAXgene Tissue miRNA 01/28/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990738 779650 0.950112 0.993088 0.79811 22607 1 76 0.00184981 264 0 7.64479e+07 0.0496927 5.72055e+06 7.698e+07 6.98119e+06 22621 3.8057e+07 0 0.152001 0.993088 0.792594 7.64479e+07 0.00305353 1.6417e+07 3.89046e+07 1.63272e+07 299 1.61549e+07 5.54314e+06 0.00245025 1.67585e+07 50.917 0.0743122 0.995438 0 49.8629 GTEX-14BIN-0011-R6a-SM-5S2RH B1, A1 9.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 821 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992637 1.15887e+06 0.946167 0.993685 0.797921 25490 1 76 0.00183979 373 0 1.28215e+08 0.0534977 5.78038e+06 1.29029e+08 7.51263e+06 25522 6.38845e+07 0 0.148246 0.993685 0.792882 1.28215e+08 0.00248366 2.73225e+07 4.11337e+07 2.77976e+07 351 2.76274e+07 1.37003e+07 0.00216139 2.76288e+07 50.0013 0.0447989 0.994733 0 50.431 GTEX-14BIN-0011-R7b-SM-5S2RI B1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 821 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991969 675675 0.945219 0.993259 0.809603 21980 1 76 0.0016821 195 0 6.50077e+07 0.0545877 5.00848e+06 6.54489e+07 3.95422e+06 21993 3.24001e+07 0 0.135617 0.993259 0.804145 6.50077e+07 0.00240108 1.38696e+07 3.18455e+07 1.41082e+07 239 1.39715e+07 5.01677e+06 0.00204112 1.40843e+07 50.2011 0.076525 0.994549 0 50.4265 GTEX-14BIN-0011-R9a-SM-5SI76 B1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 821 BP-48689 RNA isolation_PAXgene Tissue miRNA 01/27/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989247 504114 0.956558 0.992819 0.818133 23045 1 76 0.00191071 216 0 7.64631e+07 0.0431286 2.92864e+06 7.70162e+07 7.23321e+06 23065 3.80028e+07 0 0.138424 0.992819 0.812259 7.64631e+07 0.00330991 1.68161e+07 1.59962e+07 1.69908e+07 245 1.68633e+07 9.13397e+06 0.00260779 1.72032e+07 50.4989 0.0380262 0.996391 0 50.2583 GTEX-14BIN-0126-SM-5TDCG 2 B1 2 pieces; several foci of lymphocytes, possible Hashimoto 5.8 Thyroid Thyroid 0002046 975 931 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.983914 320920 0.964418 0.987913 0.707532 26328 1 76 0.00242475 272 0 1.08492e+08 0.0352819 713648 1.0982e+08 1.32934e+07 26380 5.38292e+07 0 0.256886 0.987913 0.69898 1.08492e+08 0.00449724 2.36621e+07 1.59825e+07 2.38953e+07 319 2.39103e+07 1.24563e+07 0.0034568 2.40646e+07 50.1608 0.00649835 0.991912 0 50.2452 GTEX-14BIN-0626-SM-793DP 1 B1 6 pieces; 10% dermal fat 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 981 925 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994139 218536 0.976101 0.995343 0.801709 23014 1 76 0.0029018 194 0 7.56295e+07 0.0235475 232140 7.59833e+07 1.05344e+07 23042 3.76876e+07 0 0.174393 0.995343 0.797975 7.56295e+07 0.00352646 1.64841e+07 8.2253e+06 1.64935e+07 169 1.65224e+07 1.39615e+07 0.00321375 1.65443e+07 50.0331 0.00305514 0.996548 0 50.0142 GTEX-14BIN-0726-SM-793DQ 1 B1 2 pieces 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 982 924 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.9922 282358 0.97617 0.993661 0.801657 23166 1 76 0.00296585 152 0 7.20747e+07 0.0234837 428815 7.25345e+07 1.04406e+07 23192 3.58945e+07 0 0.174512 0.993661 0.796576 7.20747e+07 0.00365985 1.59039e+07 7.0277e+06 1.59462e+07 164 1.5993e+07 1.28405e+07 0.00331234 1.59607e+07 49.9495 0.00591188 0.995122 0 50.0664 GTEX-14BIN-0826-SM-793DR 1 B1 2 pieces 10% internal fat 6.9 Nerve Nerve - Tibial 0001323 984 922 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992651 208102 0.968483 0.993763 0.748368 24027 1 76 0.00299789 159 0 7.45941e+07 0.0312182 251021 7.50623e+07 1.07681e+07 24071 3.71549e+07 0 0.220115 0.993763 0.7437 7.45941e+07 0.00349213 1.64562e+07 6.64233e+06 1.6448e+07 163 1.64678e+07 1.16042e+07 0.00324473 1.65153e+07 50.072 0.00334417 0.994875 0 49.9876 GTEX-14BIN-0926-SM-5S2OZ 1 B1 2 pieces; mild plaque; prominent medial calcium deposits in 1. 6.6 Blood Vessel Artery - Tibial 0007610 986 920 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991654 185314 0.970427 0.992944 0.789492 20714 1 76 0.00187474 134 0 6.33631e+07 0.0292028 328504 6.38134e+07 4.54864e+06 20732 3.15128e+07 0 0.180935 0.992944 0.783921 6.33631e+07 0.0026802 1.35465e+07 5.22252e+06 1.36371e+07 149 1.35653e+07 1.08289e+07 0.00227695 1.36996e+07 50.2463 0.00514789 0.994234 0 50.1667 GTEX-14BIN-1126-SM-5RQJZ 1 B1 6 pieces; 1 with 1mm subcutaneous fat; 2 with 20% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 990 916 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992107 127318 0.973499 0.993098 0.759864 23507 1 76 0.00214502 158 0 7.30865e+07 0.0262219 246379 7.35945e+07 3.89633e+06 23546 3.64101e+07 0 0.213634 0.993098 0.75462 7.30865e+07 0.00280606 1.61148e+07 7.84556e+06 1.61852e+07 164 1.61729e+07 1.22714e+07 0.00247521 1.61983e+07 50.0391 0.00334779 0.994089 0 50.109 GTEX-14BIN-1226-SM-5S2OM 1 B1 2 pieces 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 991 915 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990992 172330 0.973247 0.992643 0.772211 22777 1 76 0.00191871 128 0 5.55822e+07 0.0264074 274163 5.59941e+07 3.98985e+06 22801 2.76407e+07 0 0.201036 0.992643 0.76653 5.55822e+07 0.00274573 1.22057e+07 6.41099e+06 1.23162e+07 139 1.22675e+07 8.68211e+06 0.00233154 1.2349e+07 50.1656 0.00489628 0.994294 0 50.2254 GTEX-14BIN-1426-SM-664NI 1 B1 2 pieces; atrophic with corpora albicans 7.7 Ovary Ovary 0000992 993 913 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990175 258080 0.960514 0.991011 0.747882 23627 1 76 0.00242356 174 0 8.41907e+07 0.0392012 87744 8.49544e+07 5.09569e+06 23668 4.18859e+07 0 0.212632 0.991011 0.741159 8.41907e+07 0.00332649 1.82912e+07 1.15374e+07 1.83937e+07 174 1.83539e+07 1.62529e+07 0.00287464 1.84083e+07 50.074 0.00103284 0.991847 0 50.1398 GTEX-14BIN-1526-SM-73KZ7 1 B1 2 pieces; mostly myometrium withh islands of endometrium 6 Uterus Uterus 0000995 995 911 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991052 227770 0.962715 0.992338 0.738814 23696 1 76 0.0027894 152 0 7.50825e+07 0.0370467 278750 7.56622e+07 7.44747e+06 23725 3.73791e+07 0 0.2239 0.992338 0.733154 7.50825e+07 0.00345994 1.63553e+07 8.14367e+06 1.63808e+07 169 1.63784e+07 1.08074e+07 0.00312423 1.64587e+07 50.1223 0.00368414 0.993625 0 50.0389 GTEX-14BIN-2126-SM-793AX 1 B1 2 pieces; 20 & 10% internal fat 6.4 Heart Heart - Atrial Appendage 0006631 1017 889 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.99276 192141 0.978971 0.993846 0.822284 21685 1 76 0.00210042 149 0 6.2608e+07 0.0208269 2.11394e+06 6.29956e+07 5.13668e+06 21706 3.11562e+07 0 0.156687 0.993846 0.817224 6.2608e+07 0.00274904 1.39512e+07 6.72052e+06 1.403e+07 181 1.40881e+07 7.47939e+06 0.00242438 1.39523e+07 49.7578 0.0335569 0.994933 0 50.1408 GTEX-14BIN-2226-SM-5YYA1 1 B1 2 pieces; <5% internal fat 5.8 Heart Heart - Left Ventricle 0006566 1018 888 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.986473 95289 0.989966 0.988171 0.835096 16927 1 76 0.0021728 365 0 7.52288e+07 0.0100102 6.22456e+06 7.61293e+07 3.28562e+06 16928 3.74604e+07 0 0.15487 0.988171 0.825218 7.52288e+07 0.00308067 1.6514e+07 4.44234e+07 1.64366e+07 361 1.63028e+07 2.14502e+06 0.00262596 1.67524e+07 50.6801 0.0817629 0.989869 0 49.8825 GTEX-14BIN-2226-SM-CYKPI 1 B1 2 pieces; <5% internal fat 5.8 Heart Heart - Left Ventricle 0006566 1018 888 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 RIP-Seq GTEX-14BIN-2426-SM-5TDCF 1 B1 6 pieces; well trimmed muscle 5.8 Colon Colon - Sigmoid 0001159 1020 886 BP-48852 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.984853 224968 0.969531 0.988993 0.817016 23760 1 76 0.0022867 208 0 8.24381e+07 0.0302638 1.09232e+06 8.33556e+07 1.04106e+07 23785 4.09137e+07 0 0.152515 0.988993 0.808023 8.24381e+07 0.00441548 1.76517e+07 8.74907e+06 1.77534e+07 221 1.77273e+07 1.21481e+07 0.00334663 1.80008e+07 50.3828 0.0131043 0.993132 0 50.1436 GTEX-14BIN-2626-SM-5YY8U 1 B1 6 pieces; well trimmed muscle 6.3 Esophagus Esophagus - Muscularis 0004648 1023 883 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.98742 277723 0.967802 0.988647 0.787837 24434 1 76 0.0027012 372 0 1.1065e+08 0.0320094 2.46854e+06 1.1192e+08 5.24754e+06 24475 5.50339e+07 0 0.179966 0.988647 0.778893 1.1065e+08 0.00339355 2.39801e+07 1.251e+07 2.43202e+07 374 2.41612e+07 1.29846e+07 0.00304695 2.42629e+07 50.105 0.0220563 0.989875 0 50.352 GTEX-14BIN-2726-SM-5RQIE 1 B1 6 pieces; partially sloughed epithelium 6.8 Esophagus Esophagus - Mucosa 0006920 1027 879 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.988722 236313 0.974325 0.989788 0.784134 21938 1 76 0.00217346 129 0 6.18115e+07 0.0254697 373876 6.24492e+07 3.06034e+06 21949 3.0769e+07 0 0.19019 0.989788 0.776127 6.18115e+07 0.00311943 1.39399e+07 7.7364e+06 1.40673e+07 152 1.40157e+07 9.31488e+06 0.00264594 1.4063e+07 50.0842 0.00598688 0.990855 0 50.2274 GTEX-14BIN-3026-SM-5ZZUS 2 B1 6 pieces; well trimmed; superficial mucosa autolyzed 6.3 Colon Colon - Transverse 0001157 1036 870 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99279 165865 0.967723 0.994111 0.775891 24097 1 76 0.00213839 143 0 6.50198e+07 0.0319993 793387 6.54049e+07 5.69668e+06 24124 3.23851e+07 0 0.191832 0.994111 0.771322 6.50198e+07 0.00341109 1.41572e+07 7.56694e+06 1.42828e+07 162 1.42042e+07 9.00554e+06 0.0027739 1.4323e+07 50.2083 0.0121304 0.995432 0 50.2208 GTEX-14BIN-3126-SM-664NJ 2 B1 1 piece; 75% anterior; 25% posterior [marked] 7.1 Pituitary Pituitary 0000007 1078 828 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.9926 323721 0.967534 0.993087 0.804553 25409 1 76 0.00215226 272 0 1.09763e+08 0.0322125 315101 1.10527e+08 6.71645e+06 25448 5.46361e+07 0 0.162982 0.993087 0.79899 1.09763e+08 0.00290335 1.80304e+07 1.39839e+07 1.81203e+07 310 1.80753e+07 2.33277e+07 0.00252762 1.81262e+07 50.0702 0.0028509 0.993573 0 50.1243 GTEX-14BIN-3226-SM-62LDR 2 B1 2 pieces; meningeal blood vessels included 7.4 Brain Brain - Cortex 0001870 1080 826 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.98819 481202 0.96239 0.991917 0.828283 24609 1 76 0.00261497 269 0 1.02932e+08 0.0372935 4.6692e+06 1.03771e+08 7.86852e+06 24627 5.1171e+07 0 0.134107 0.991917 0.821588 1.02932e+08 0.00317187 2.24269e+07 2.37036e+07 2.2627e+07 325 2.26395e+07 1.16523e+07 0.00289237 2.27466e+07 50.118 0.0449954 0.995644 0 50.2221 GTEX-14BIN-3326-SM-5Q5E6 2 B1 2 pieces 6.5 Brain Brain - Cerebellum 0002037 1082 824 BP-48448 RNA Extraction from Paxgene-derived Lysate Plate Based 01/17/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.988773 466874 0.942329 0.991852 0.717227 24125 1 76 0.0023358 198 0 8.88544e+07 0.0573611 1.77572e+06 8.95843e+07 1.33601e+07 24158 4.41661e+07 0 0.225102 0.991852 0.711383 8.88544e+07 0.00379223 1.89968e+07 2.07297e+07 1.92711e+07 252 1.92949e+07 9.64485e+06 0.00306175 1.92301e+07 49.916 0.0198217 0.994931 0 50.3583 GTEX-14BMU-0003-SM-5CV98 B1 Blood Whole Blood 0013756 1391 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14BMU-0003-SM-7DRNV B1 Blood Whole Blood 0013756 1391 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14BMU-0006-SM-5MR3T B1 9.1 Blood Whole Blood 0013756 1391 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.989289 570844 0.961829 0.989742 0.792581 18595 1 76 0.00297387 116 0 8.04407e+07 0.0377378 178534 8.12745e+07 3.012e+06 18604 4.00921e+07 0 0.169248 0.989742 0.784451 8.04407e+07 0.00310753 1.80497e+07 6.89848e+07 1.81768e+07 142 1.81662e+07 1.77074e+07 0.00304067 1.81108e+07 49.9237 0.00219668 0.990195 0 50.1754 GTEX-14BMU-0126-SM-5S2Q9 1 B1 2 pieces, cortex, well preserved; adherent fatty nubbins up to ~2mm, rep delineated 8.7 Adrenal Gland Adrenal Gland 0002369 1529 716 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994142 149052 0.97861 0.995367 0.854082 20513 1 76 0.00156821 115 0 5.4776e+07 0.0210094 900034 5.5031e+07 3.14427e+06 20525 2.7294e+07 0 0.124529 0.995367 0.850125 5.4776e+07 0.00228077 1.20665e+07 5.42385e+06 1.22584e+07 138 1.22357e+07 1.04955e+07 0.00192405 1.21489e+07 49.8219 0.016355 0.996592 0 50.3945 GTEX-14BMU-0226-SM-5S2QA 1 B1 2 pieces, diffuse lymphocytic or Hashimoto's thyroiditis, rep lymphoid aggregates delineated 7.2 Thyroid Thyroid 0002046 1532 713 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991048 184386 0.964122 0.992216 0.767813 23667 1 76 0.00231199 122 0 6.25583e+07 0.0339373 120680 6.30491e+07 3.88623e+06 23697 3.11098e+07 0 0.196308 0.992216 0.761837 6.25583e+07 0.00302053 1.37036e+07 1.03168e+07 1.39006e+07 138 1.38928e+07 1.06986e+07 0.00266584 1.37869e+07 49.8088 0.00191406 0.993384 0 50.3569 GTEX-14BMU-0326-SM-793DO 1 B1 6 pieces, no abnormalities 8.1 Blood Vessel Artery - Aorta 0001496 1535 710 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994316 303008 0.978497 0.995494 0.859375 21823 1 76 0.0026873 158 0 7.54885e+07 0.0211288 232620 7.58302e+07 1.06558e+07 21837 3.76225e+07 0 0.119122 0.995494 0.855503 7.54885e+07 0.00326441 1.64796e+07 6.07179e+06 1.65227e+07 174 1.65265e+07 1.60126e+07 0.00297551 1.65623e+07 50.054 0.00306764 0.996672 0 50.0654 GTEX-14BMU-0426-SM-73KYT 1 B1 2 pieces, no abnormalities, well-preserved 8 Spleen Spleen 0002106 1538 707 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991047 319093 0.9635 0.99234 0.770709 24136 1 76 0.00291246 165 0 8.47018e+07 0.0358362 389504 8.53556e+07 8.76238e+06 24175 4.21561e+07 0 0.192792 0.99234 0.764805 8.47018e+07 0.00351324 1.86621e+07 1.00673e+07 1.86216e+07 193 1.86721e+07 1.35939e+07 0.00321246 1.87198e+07 50.0639 0.00456331 0.993632 0 49.9458 GTEX-14BMU-0526-SM-73KW4 1 B1 2 pieces, mild peribronchitis, well - preserved sections 9.2 Lung Lung 0008952 1538 707 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.99317 199651 0.977882 0.993989 0.839174 23575 1 76 0.00401398 210 0 9.26455e+07 0.0216543 279322 9.32058e+07 4.17939e+06 23602 4.61547e+07 0 0.138709 0.993989 0.834129 9.26455e+07 0.00374867 2.05993e+07 7.29354e+06 2.08277e+07 237 2.08419e+07 1.915e+07 0.00388143 2.06624e+07 49.7837 0.00299683 0.994808 0 50.2757 GTEX-14BMU-0626-SM-73KZ6 1 B1 2 pieces, minimal fascial/vascular tissue 9.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1543 702 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994877 264387 0.980173 0.995908 0.857385 21945 1 76 0.00231337 209 0 8.11294e+07 0.0195739 586655 8.14627e+07 7.78091e+06 21958 4.04509e+07 0 0.122788 0.995908 0.853877 8.11294e+07 0.0027266 1.79377e+07 6.88332e+06 1.80884e+07 224 1.80914e+07 1.56351e+07 0.00251977 1.80162e+07 49.8958 0.00720151 0.996939 0 50.2092 GTEX-14BMU-0726-SM-73KXS 1 B1 2 pieces Islets well preserved, rep encircled 7.2 Pancreas Pancreas 0001150 1545 700 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991281 433082 0.954313 0.992805 0.771607 22801 1 76 0.00268749 122 0 8.23981e+07 0.0454648 214399 8.29953e+07 8.55206e+06 22837 4.10284e+07 0 0.182706 0.992805 0.766055 8.23981e+07 0.00351253 1.83029e+07 2.03745e+07 1.84944e+07 140 1.84761e+07 1.87763e+07 0.00309938 1.84635e+07 49.9829 0.00258327 0.994328 0 50.2602 GTEX-14BMU-0826-SM-73KZ8 1 B1 6 pieces, all target muscularis 9 Esophagus Esophagus - Muscularis 0004648 1549 696 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995281 154877 0.979424 0.996048 0.862789 21658 1 76 0.00228967 207 0 7.69393e+07 0.0202577 544877 7.72446e+07 6.87922e+06 21669 3.83643e+07 0 0.116635 0.996048 0.859379 7.69393e+07 0.0025792 1.69232e+07 6.18677e+06 1.70751e+07 210 1.70562e+07 1.48008e+07 0.00243433 1.69996e+07 49.9169 0.00705392 0.996815 0 50.2234 GTEX-14BMU-0926-SM-5S2QB 1 B1 6 pieces, squamous mucosa up to ~0.35mm, ~30-40% thickness 8.2 Esophagus Esophagus - Mucosa 0006920 1551 694 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993297 149381 0.977727 0.994121 0.845932 20324 1 76 0.0017617 126 0 5.48048e+07 0.0219144 230004 5.51289e+07 3.11419e+06 20332 2.73173e+07 0 0.131796 0.994121 0.840958 5.48048e+07 0.00242696 1.23168e+07 6.91954e+06 1.24344e+07 130 1.24117e+07 1.16748e+07 0.00209406 1.23882e+07 49.9526 0.00417212 0.994944 0 50.2375 GTEX-14BMU-1026-SM-5RQJ5 1 B1 6 pieces, all target muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 1552 693 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992698 173905 0.976612 0.99396 0.833732 21560 1 76 0.00186062 161 0 6.47832e+07 0.023131 703991 6.51769e+07 3.06714e+06 21579 3.22644e+07 0 0.14288 0.99396 0.828696 6.47832e+07 0.00265941 1.41636e+07 5.40266e+06 1.43227e+07 167 1.42595e+07 1.07927e+07 0.00225951 1.43067e+07 50.0827 0.0108012 0.995222 0 50.2792 GTEX-14BMU-1126-SM-5RQJ8 1 B1 6 pieces, well-preserved mucosa up to ~0.8mm, 40-90% thickness 7.4 Stomach Stomach 0000945 1560 685 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.987756 143152 0.979027 0.988859 0.845642 21937 1 76 0.00198782 253 0 6.65855e+07 0.0205157 769927 6.73357e+07 3.59918e+06 21952 3.316e+07 0 0.133385 0.988859 0.83622 6.65855e+07 0.00277123 1.52034e+07 5.59604e+07 1.55622e+07 184 1.55367e+07 1.70728e+07 0.00237909 1.53057e+07 49.6256 0.0114342 0.989961 0 50.5831 GTEX-14BMU-1226-SM-5S2OR 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~60 microns 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1562 683 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991884 369586 0.972517 0.993655 0.802602 24235 1 76 0.0016748 277 0 9.17877e+07 0.0272581 1.25539e+06 9.23738e+07 6.67623e+06 24264 4.56726e+07 0 0.169915 0.993655 0.797509 9.17877e+07 0.00256323 2.01311e+07 9.43555e+06 2.03556e+07 257 2.02324e+07 1.50242e+07 0.00211823 2.04232e+07 50.2347 0.0135903 0.995426 0 50.2772 GTEX-14BMU-1326-SM-5RQIH 1 B1 6 pieces, targaet muscularis, minute 'contaminant' mucosal fragments 8.3 Colon Colon - Sigmoid 0001159 1564 681 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993228 182131 0.977976 0.994247 0.847784 21818 1 76 0.00183225 170 0 7.26891e+07 0.0217333 615320 7.31097e+07 3.69757e+06 21836 3.62117e+07 0 0.130192 0.994247 0.842907 7.26891e+07 0.00254416 1.57824e+07 6.30114e+06 1.59645e+07 192 1.59082e+07 1.30784e+07 0.00218784 1.59102e+07 50.0032 0.00841639 0.995265 0 50.2867 GTEX-14BMU-1426-SM-5TDE5 1 B1 6 pieces, excellent specimen, ~50-60% lymphoid aggregates 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 1569 676 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986185 312201 0.966599 0.99018 0.784107 23896 1 76 0.00253859 132 0 6.40511e+07 0.0325261 251249 6.46863e+07 7.70684e+06 23922 3.17607e+07 0 0.182492 0.99018 0.776407 6.40511e+07 0.00461118 1.41204e+07 7.2715e+06 1.41549e+07 146 1.41825e+07 1.09567e+07 0.0035707 1.43454e+07 50.2855 0.00388412 0.994175 0 50.061 GTEX-14BMU-1526-SM-5TDE6 1 B1 6 pieces, mucosa well preserved, up to ~0.4mm, ~20-25% thickness 7.8 Colon Colon - Transverse 0001157 1572 673 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987012 1.6861e+06 0.976303 0.989884 0.807776 31486 1 76 0.00235485 789 0 6.63091e+08 0.0226858 1.4231e+07 6.69867e+08 8.66791e+07 31617 3.29558e+08 0 0.168527 0.989884 0.799604 6.63091e+08 0.00394958 1.45912e+08 1.89258e+08 1.46112e+08 650 1.45416e+08 9.92286e+07 0.0031499 1.4832e+08 50.4943 0.0212445 0.992755 0 50.0342 GTEX-14BMU-1626-SM-5TDE7 0 B1 2 pieces, well preserved premenopausal duct-lobular units, rep. delineated 7.9 Breast Breast - Mammary Tissue 0008367 1578 667 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987133 203868 0.972969 0.990681 0.82605 25138 1 76 0.00237621 215 0 8.80706e+07 0.0261869 589363 8.8899e+07 1.15928e+07 25160 4.3745e+07 0 0.146919 0.990681 0.818352 8.80706e+07 0.00415014 1.93898e+07 1.00593e+07 1.94656e+07 237 1.95067e+07 1.71782e+07 0.00326 1.96504e+07 50.1835 0.00662958 0.994229 0 50.0975 GTEX-14BMU-1726-SM-5TDE8 1 B1 2 pieces, fertile ovary, rep eggs delineated, follicle cyst ensquared 8.3 Ovary Ovary 0000992 1584 661 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990829 178191 0.971667 0.993422 0.796302 23070 1 76 0.0020732 149 0 7.088e+07 0.0280474 332582 7.13493e+07 8.078e+06 23094 3.52601e+07 0 0.175364 0.993422 0.791065 7.088e+07 0.00359705 1.56168e+07 7.00726e+06 1.5719e+07 161 1.57047e+07 1.30201e+07 0.00283314 1.5812e+07 50.1703 0.00466132 0.996016 0 50.1631 GTEX-14BMU-1826-SM-5RQII 1 B1 2 pieces, all myometrium 8.7 Uterus Uterus 0000995 1587 658 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993261 168617 0.973769 0.994176 0.821975 22200 1 76 0.00191441 146 0 6.90552e+07 0.0258801 218507 6.94597e+07 3.54494e+06 22220 3.43984e+07 0 0.151794 0.994176 0.817188 6.90552e+07 0.00271067 1.51151e+07 5.28563e+06 1.52526e+07 162 1.52121e+07 1.32076e+07 0.00231217 1.52199e+07 50.0128 0.00314581 0.995092 0 50.2264 GTEX-14BMU-1926-SM-5S2QC 0 B1 6 pieces, squamous mucosa up to ~0.3mm 7.9 Vagina Vagina 0000996 1589 656 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993668 175774 0.974908 0.994454 0.822446 21859 1 76 0.00173553 135 0 5.64467e+07 0.0248337 240891 5.67615e+07 3.33738e+06 21875 2.81202e+07 0 0.152463 0.994454 0.817884 5.64467e+07 0.00249079 1.25696e+07 6.4787e+06 1.26746e+07 137 1.26263e+07 1.0872e+07 0.00211286 1.2666e+07 50.0784 0.00424392 0.995239 0 50.2079 GTEX-14BMU-2026-SM-5S2W6 0 B1 2 pieces ~5% interstitial fat, rep delineated 7.5 Muscle Muscle - Skeletal 0011907 1638 607 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993307 198972 0.984081 0.994911 0.883167 19090 1 76 0.00158054 273 0 8.40384e+07 0.0156957 1.04468e+06 8.44682e+07 8.38137e+06 19094 4.18846e+07 0 0.100913 0.994911 0.878673 8.40384e+07 0.00248554 1.85709e+07 1.20788e+07 1.84838e+07 277 1.84527e+07 1.62598e+07 0.00203231 1.87242e+07 50.3652 0.0123677 0.996516 0 49.8825 GTEX-14BMU-2126-SM-5S2TS 0 B1 2 pieces, ~5-10% fascia, rep delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1639 606 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990007 209147 0.978124 0.992038 0.823162 22241 1 76 0.00181464 214 0 8.34046e+07 0.0215702 432101 8.40741e+07 8.01985e+06 22266 4.15264e+07 0 0.154962 0.992038 0.816608 8.34046e+07 0.00288324 1.83369e+07 7.55121e+06 1.8436e+07 228 1.8414e+07 1.48127e+07 0.00234785 1.85247e+07 50.1499 0.00513953 0.994069 0 50.1347 GTEX-14BMU-2226-SM-5TDE9 0 B1 6 pieces, squamous epithelium is ~60 microns, trace adherent dermal fat, rep delineated 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1641 604 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.988268 226160 0.970766 0.991243 0.834601 23728 1 76 0.00218111 220 0 8.02244e+07 0.0290288 784853 8.09331e+07 9.41650e+06 23751 3.98722e+07 0 0.136164 0.991243 0.827293 8.02244e+07 0.0042213 1.7495e+07 9.74026e+06 1.76179e+07 217 1.75477e+07 1.30412e+07 0.00319814 1.78031e+07 50.3612 0.00969756 0.994219 0 50.175 GTEX-14BMU-2426-SM-5RQIJ 0 B1 2 pieces, clean sections, no atherosis 8.3 Blood Vessel Artery - Tibial 0007610 1645 600 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993714 138385 0.979032 0.994356 0.882277 19971 1 76 0.00178396 170 0 7.15437e+07 0.020476 500371 7.19498e+07 3.42817e+06 19979 3.56355e+07 0 0.0967553 0.994356 0.877297 7.15437e+07 0.00248531 1.54699e+07 5.07254e+06 1.55614e+07 180 1.55049e+07 1.55144e+07 0.00213441 1.55756e+07 50.1137 0.00695444 0.994998 0 50.1474 GTEX-14BMU-5001-SM-AN427 B1 Lung Lung 0008952 1541 ChIP-Seq GTEX-14BMV-0002-SM-5CV8E C1 Blood Whole Blood 0013756 489 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14BMV-0002-SM-7DRNQ C1 Blood Whole Blood 0013756 489 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14BMV-0005-SM-5NQ6Y C1 8.7 Blood Whole Blood 0013756 489 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991985 690118 0.960827 0.993595 0.755934 20476 1 76 0.00234953 118 0 7.29793e+07 0.0386305 171603 7.34497e+07 5.43136e+06 20502 3.63305e+07 0 0.204893 0.993595 0.751093 7.29793e+07 0.00339666 1.62393e+07 4.26533e+07 1.63241e+07 139 1.6327e+07 1.40355e+07 0.00287224 1.63685e+07 50.0635 0.00233633 0.995206 0 50.1303 GTEX-14BMV-0011-R10a-SM-AHZN8 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 498 ChIP-Seq GTEX-14BMV-0011-R10b-SM-CYKPO C1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 498 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 RIP-Seq GTEX-14BMV-0011-R3a-SM-5ZZU7 C1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 498 BP-49031 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.988094 601960 0.952639 0.98966 0.832878 24602 1 76 0.00219953 268 0 8.03244e+07 0.0472238 5.37638e+06 8.11636e+07 7.07376e+06 24613 4.00248e+07 0 0.11976 0.98966 0.824266 8.03244e+07 0.0034887 1.73805e+07 2.546e+07 1.75996e+07 319 1.73587e+07 5.78691e+06 0.00284309 1.7732e+07 50.532 0.0662413 0.991226 0 50.3132 GTEX-14BMV-0011-R5b-SM-62LFT C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 498 BP-49031 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988699 496920 0.960269 0.992155 0.829047 23642 1 76 0.00287122 267 0 8.70124e+07 0.039483 3.67434e+06 8.77004e+07 6.46986e+06 23655 4.32684e+07 0 0.131222 0.992155 0.822543 8.70124e+07 0.00346193 1.89543e+07 2.11374e+07 1.90164e+07 284 1.89937e+07 8.88877e+06 0.00316555 1.92352e+07 50.3158 0.0418965 0.995611 0 50.0818 GTEX-14BMV-0011-R6b-SM-5YY9I C1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 498 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991657 771166 0.948597 0.992717 0.794171 24926 1 76 0.00270284 270 0 9.77713e+07 0.050961 2.90364e+06 9.84886e+07 4.304e+06 24955 4.8689e+07 0 0.154427 0.992717 0.788387 9.77713e+07 0.00331162 2.11189e+07 2.53591e+07 2.11267e+07 283 2.1143e+07 1.22931e+07 0.0030069 2.12103e+07 50.0795 0.029482 0.993778 0 50.0093 GTEX-14BMV-0011-R7b-SM-5YY9J C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 498 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.9909 960841 0.954493 0.992236 0.803855 23443 1 76 0.00274712 371 0 1.05187e+08 0.0452933 6.45657e+06 1.0601e+08 4.73111e+06 23465 5.23874e+07 0 0.150638 0.992236 0.797613 1.05187e+08 0.00338612 2.24433e+07 5.16156e+07 2.28535e+07 354 2.27651e+07 8.79436e+06 0.00306619 2.26734e+07 49.8991 0.0609053 0.993571 0 50.4528 GTEX-14BMV-0011-R9b-SM-5ZZUA C1, A1 8.2 Brain Brain - Spinal cord (cervical c-1) 0006469 498 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994074 699191 0.954664 0.995131 0.790607 24450 1 76 0.00202551 284 0 8.96223e+07 0.0449029 1.32909e+06 9.00609e+07 8.56054e+06 24479 4.4674e+07 0 0.164057 0.995131 0.786758 8.96223e+07 0.00292798 1.97146e+07 1.7679e+07 1.99296e+07 267 1.9825e+07 1.33062e+07 0.00247627 1.99123e+07 50.1098 0.0147577 0.996188 0 50.2712 GTEX-14BMV-0126-SM-5S2PO 1 C1 6 pieces; well trimmed; 5% intradermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 591 1159 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.99009 212264 0.971576 0.99124 0.768238 23724 1 76 0.00191629 200 0 7.40029e+07 0.028169 184277 7.46569e+07 4.02928e+06 23755 3.68661e+07 0 0.203339 0.99124 0.761508 7.40029e+07 0.00257562 1.60628e+07 7.53446e+06 1.6156e+07 166 1.61398e+07 1.30195e+07 0.00224557 1.61601e+07 50.0313 0.00246832 0.992389 0 50.1446 GTEX-14BMV-0226-SM-5S2N2 1 C1 2 pieces; 1 with 20% stromal vascular content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 593 1158 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992888 210161 0.976218 0.994401 0.820569 23052 1 76 0.00177971 209 0 8.34451e+07 0.0235011 331309 8.39149e+07 5.86368e+06 23075 4.15351e+07 0 0.155649 0.994401 0.815975 8.34451e+07 0.00262854 1.83147e+07 7.89018e+06 1.85249e+07 216 1.84287e+07 1.50172e+07 0.00220348 1.85376e+07 50.1473 0.00394816 0.995915 0 50.2853 GTEX-14BMV-0326-SM-5RQHW 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 595 1156 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993916 168024 0.9841 0.994815 0.869812 19532 1 76 0.00193193 269 0 8.68753e+07 0.0157086 1.44939e+06 8.73281e+07 4.28232e+06 19545 4.33152e+07 0 0.114288 0.994815 0.865302 8.68753e+07 0.00261238 1.90192e+07 1.32046e+07 1.91043e+07 260 1.90878e+07 1.67718e+07 0.00227185 1.91098e+07 50.0288 0.0165971 0.995713 0 50.1116 GTEX-14BMV-0326-SM-CYKOP 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 595 1156 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 RIP-Seq GTEX-14BMV-0426-SM-5TDEF 1 C1 2 pieces; well trimmed; <5% internal fat 7.3 Nerve Nerve - Tibial 0001323 597 1155 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98714 245354 0.966439 0.99081 0.750695 24507 1 76 0.00236603 167 0 7.85886e+07 0.0332597 299208 7.93176e+07 9.71411e+06 24550 3.90205e+07 0 0.215744 0.99081 0.743796 7.85886e+07 0.00437934 1.72205e+07 7.84895e+06 1.73348e+07 175 1.73453e+07 1.19741e+07 0.00336895 1.749e+07 50.2077 0.00377228 0.99448 0 50.1653 GTEX-14BMV-0526-SM-5S2NE 1 C1 2 pieces; no plaques 6.8 Blood Vessel Artery - Tibial 0007610 598 1154 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992806 139819 0.972886 0.99385 0.807232 21225 1 76 0.00178301 160 0 7.06712e+07 0.0267754 373079 7.11085e+07 5.32047e+06 21243 3.51827e+07 0 0.165654 0.99385 0.802267 7.06712e+07 0.0024271 1.50907e+07 5.4463e+06 1.5234e+07 167 1.51393e+07 1.25796e+07 0.00210472 1.52603e+07 50.199 0.00524662 0.994894 0 50.2364 GTEX-14BMV-0626-SM-793AU 1 C1 2 pieces; fibroadipose tissue; 1 has mammary duct 6.8 Breast Breast - Mammary Tissue 0008367 599 1154 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.984869 202277 0.974272 0.985861 0.813748 22179 1 76 0.00240361 138 0 6.32842e+07 0.025475 585990 6.41918e+07 4.82394e+06 22199 3.1507e+07 0 0.160523 0.985861 0.802243 6.32842e+07 0.00293489 1.40275e+07 6.99066e+06 1.40508e+07 155 1.41027e+07 1.03333e+07 0.00266898 1.40347e+07 49.8793 0.00912874 0.986853 0 50.0416 GTEX-14BMV-0726-SM-73KVE 1 C1 2 pieces 6.6 Thyroid Thyroid 0002046 606 1148 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989441 346071 0.968781 0.990523 0.715487 25981 1 76 0.00422665 273 0 1.22351e+08 0.0309547 513247 1.23522e+08 5.84215e+06 26047 6.08419e+07 0 0.253294 0.990523 0.708707 1.22351e+08 0.00455699 2.69849e+07 1.22472e+07 2.70897e+07 320 2.71442e+07 1.63728e+07 0.00439164 2.70613e+07 49.9236 0.00415511 0.991605 0 50.0969 GTEX-14BMV-0826-SM-73KXU 2 C1 2 pieces; extensive alveolar hemorrhage 7.4 Lung Lung 0008952 608 1146 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.991893 432075 0.977154 0.993367 0.713487 23967 1 76 0.00310453 156 0 8.67318e+07 0.0224512 331950 8.7311e+07 8.04854e+06 24011 4.31722e+07 0 0.263668 0.993367 0.708754 8.67318e+07 0.00375383 1.93944e+07 8.98583e+06 1.93991e+07 178 1.94771e+07 1.2748e+07 0.0034287 1.94428e+07 49.9559 0.00380193 0.99484 0 50.006 GTEX-14BMV-0826-SM-CYKTX-ELUATE 2 C1 2 pieces; extensive alveolar hemorrhage 7.4 Lung Lung 0008952 608 1146 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14BMV-0826-SM-CYKTX-INPUT 2 C1 2 pieces; extensive alveolar hemorrhage 7.4 Lung Lung 0008952 608 1146 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14BMV-0826-SM-CYKTX-SUP 2 C1 2 pieces; extensive alveolar hemorrhage 7.4 Lung Lung 0008952 608 1146 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14BMV-0926-SM-7DHKM 1 C1 2 pieces: 1 very small (1mm) group of small arteries; other is 90% fat and a tiny group of small vessels 7.1 Blood Vessel Artery - Coronary 0001621 613 1142 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.987055 125305 0.973421 0.987502 0.772814 22870 1 76 0.00364795 155 0 7.3403e+07 0.026337 1.13570e+06 7.4332e+07 6.5718e+06 22889 3.64604e+07 0 0.200607 0.987502 0.763155 7.3403e+07 0.00545233 1.59742e+07 1.00397e+07 1.61593e+07 183 1.61173e+07 8.83165e+06 0.00454973 1.60432e+07 49.8847 0.0152788 0.98795 0 50.2879 GTEX-14BMV-1026-SM-5SI6B 1 C1 2 pieces: 1 with 10% internal fat, other with 50% internal; fat 7.6 Heart Heart - Atrial Appendage 0006631 613 1143 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.990369 193893 0.979583 0.9934 0.786068 22207 1 76 0.00206379 267 0 9.41195e+07 0.020152 1.04516e+06 9.47448e+07 9.20316e+06 22235 4.6829e+07 0 0.193516 0.9934 0.780879 9.41195e+07 0.00318028 2.05252e+07 1.71356e+07 2.03672e+07 277 2.04154e+07 1.34397e+07 0.00262033 2.07199e+07 50.37 0.0110313 0.99643 0 49.8068 GTEX-14BMV-1226-SM-5TDDY 1 C1 6 pieces; no plaques 6.2 Blood Vessel Artery - Aorta 0001496 617 1140 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.990648 185262 0.976051 0.993213 0.818347 21617 1 76 0.00221337 143 0 7.10577e+07 0.0234993 192686 7.15432e+07 7.74423e+06 21638 3.5331e+07 0 0.157704 0.993213 0.812793 7.10577e+07 0.00378665 1.52883e+07 5.67921e+06 1.53983e+07 159 1.539e+07 1.37315e+07 0.00299798 1.54726e+07 50.1338 0.00269328 0.995778 0 50.1793 GTEX-14BMV-1426-SM-5S2WA 1 C1 6 pieces; well trimmed except for small submucosal gland 6.3 Esophagus Esophagus - Muscularis 0004648 619 1139 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990171 220060 0.968491 0.992186 0.757475 22177 1 76 0.00215183 151 0 7.47105e+07 0.0313052 826429 7.52989e+07 7.538e+06 22209 3.71642e+07 0 0.211016 0.992186 0.751556 7.47105e+07 0.00336317 1.59364e+07 7.39231e+06 1.60336e+07 175 1.59703e+07 1.02855e+07 0.00275627 1.6143e+07 50.2689 0.0109753 0.994201 0 50.152 GTEX-14BMV-1526-SM-793AV 1 C1 6 pieces; well trimmed 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 621 1137 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992664 263143 0.968796 0.9935 0.776978 22226 1 76 0.00236427 124 0 6.3021e+07 0.0309921 596999 6.34333e+07 5.30373e+06 22249 3.1343e+07 0 0.191818 0.9935 0.771927 6.3021e+07 0.00290222 1.35253e+07 5.4453e+06 1.35021e+07 148 1.35786e+07 9.17867e+06 0.00263302 1.35004e+07 49.8556 0.00941144 0.994336 0 49.9571 GTEX-14BMV-1626-SM-73KVQ 1 C1 2 fragmented pieces 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 622 1137 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990839 447618 0.967195 0.991852 0.760687 24993 1 76 0.0042374 272 0 1.08911e+08 0.0325392 961007 1.09806e+08 5.10401e+06 25037 5.41932e+07 0 0.206508 0.991852 0.754489 1.08911e+08 0.00439827 2.38631e+07 1.80481e+07 2.41103e+07 280 2.41468e+07 1.58738e+07 0.00431775 2.39445e+07 49.7897 0.00875187 0.992866 0 50.2576 GTEX-14BMV-2226-SM-5RQHX 3 C1 6 pieces; mucosa autolyzed, muscle intact 5.8 Stomach Stomach 0000945 657 1106 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991859 131330 0.971185 0.992766 0.757281 24341 1 76 0.00224367 161 0 7.05688e+07 0.0286061 890726 7.10829e+07 3.4872e+06 24371 3.5126e+07 0 0.213904 0.992766 0.751803 7.05688e+07 0.00299896 1.55994e+07 9.33458e+06 1.56867e+07 171 1.5632e+07 9.54634e+06 0.00262097 1.57165e+07 50.1347 0.0125308 0.993674 0 50.1396 GTEX-14BMV-2326-SM-5RQJ4 2 C1 2 pieces: 1 glandular, the other 90% stromal 5.7 Prostate Prostate 0002367 660 1103 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989446 168812 0.963531 0.990322 0.744918 24083 1 76 0.00234916 136 0 6.35539e+07 0.0362675 783540 6.4175e+07 3.38403e+06 24117 3.15997e+07 0 0.218612 0.990322 0.737709 6.35539e+07 0.0031214 1.39168e+07 6.33879e+06 1.40632e+07 154 1.40165e+07 7.60899e+06 0.00273494 1.40182e+07 50.0032 0.0122094 0.991198 0 50.2617 GTEX-14BMV-2426-SM-5S2PP 3 C1 6 pieces; mucosa autolyzed muscle intact 5.9 Colon Colon - Transverse 0001157 662 1102 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.988336 116554 0.97234 0.989149 0.805727 23264 1 76 0.0019886 147 0 6.47618e+07 0.0271857 1.16098e+06 6.54722e+07 3.4132e+06 23285 3.22256e+07 0 0.166613 0.989149 0.796984 6.47618e+07 0.00283259 1.4162e+07 6.66828e+06 1.44569e+07 174 1.43368e+07 8.5902e+06 0.00241025 1.43377e+07 50.0015 0.0177325 0.989962 0 50.5152 GTEX-14BMV-2826-SM-5TDED 1 C1 6 pieces; up to 8 hair follicles per piece; 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 673 1094 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98632 224545 0.971316 0.99041 0.753799 25003 1 76 0.00242527 176 0 7.9666e+07 0.0284415 336077 8.04374e+07 1.02654e+07 25041 3.95616e+07 0 0.217517 0.99041 0.746571 7.9666e+07 0.00416469 1.7455e+07 9.46332e+06 1.7578e+07 171 1.76538e+07 1.33719e+07 0.00329139 1.76946e+07 50.0577 0.00417812 0.994501 0 50.1756 GTEX-14BMV-2926-SM-5TDEE 2 C1 4 pieces 6.1 Brain Brain - Cerebellum 0002037 677 1090 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.989066 396992 0.942967 0.991935 0.717183 24075 1 76 0.00255361 128 0 7.30972e+07 0.0567081 742159 7.36915e+07 9.26640e+06 24101 3.63387e+07 0 0.225784 0.991935 0.711399 7.30972e+07 0.0042272 1.56759e+07 1.70249e+07 1.5849e+07 163 1.58763e+07 8.75236e+06 0.00338798 1.58451e+07 49.9509 0.0100712 0.994803 0 50.2746 GTEX-14BMV-3026-SM-5S2PQ 2 C1 4 pieces 6.5 Brain Brain - Cortex 0001870 679 1088 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993354 341576 0.956544 0.994423 0.819465 23113 1 76 0.00183107 153 0 6.41996e+07 0.0430348 1.37681e+06 6.45597e+07 3.76066e+06 23127 3.19917e+07 0 0.137079 0.994423 0.814894 6.41996e+07 0.00246744 1.39672e+07 1.37268e+07 1.41270e+07 177 1.40798e+07 8.59025e+06 0.00214891 1.40799e+07 50.0002 0.0213262 0.995491 0 50.2845 GTEX-14BMV-3126-SM-5S2UV 2 C1 2 pieces: 1 is neurohypophysis, other is adenohypophysis [labeled] 6.4 Pituitary Pituitary 0000007 680 1088 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991108 479795 0.942481 0.992847 0.710528 24643 1 76 0.00208701 132 0 7.1012e+07 0.0573162 425548 7.15237e+07 6.89443e+06 24683 3.53527e+07 0 0.231953 0.992847 0.705445 7.1012e+07 0.00315055 1.51088e+07 2.19232e+07 1.5305e+07 152 1.52859e+07 9.36514e+06 0.00261785 1.52574e+07 49.9532 0.00594975 0.994586 0 50.3227 GTEX-14C38-0003-SM-5DU4G B1 Blood Whole Blood 0013756 341 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14C38-0003-SM-7DRO3 B1 Blood Whole Blood 0013756 341 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14C38-0006-SM-5NQBF B1 8.3 Blood Whole Blood 0013756 341 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.966198 263874 0.984399 0.969297 0.819344 17412 1 76 0.00261717 112 0 8.13374e+07 0.0137065 360854 8.39138e+07 1.22425e+07 17415 4.03959e+07 0 0.165055 0.969297 0.794188 8.13374e+07 0.0056756 1.90758e+07 1.09692e+08 1.92149e+07 140 1.92179e+07 2.15521e+07 0.00414149 1.93436e+07 50.1631 0.00430029 0.972396 0 50.1817 GTEX-14C38-0126-SM-5YY9V 1 B1 2 pieces, spermatogenesis is present 6.7 Testis Testis 0000473 442 1198 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990037 278707 0.937974 0.991103 0.714611 33736 1 76 0.00271315 215 0 9.80714e+07 0.0617013 940174 9.89517e+07 4.52915e+06 33807 4.8836e+07 0 0.223363 0.991103 0.708253 9.80714e+07 0.00324356 2.06996e+07 1.42101e+07 2.07832e+07 221 2.08214e+07 1.60079e+07 0.00297807 2.07603e+07 49.9265 0.00950134 0.992169 0 50.1007 GTEX-14C38-0426-SM-5TDDZ 0 B1 2 pieces, 10-15% interstitial fat, rep delineated 6.6 Muscle Muscle - Skeletal 0011907 509 1131 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98852 219451 0.983901 0.992043 0.87515 19787 1 76 0.00199096 214 0 8.10942e+07 0.0158498 859119 8.17446e+07 1.06234e+07 19792 4.03229e+07 0 0.108752 0.992043 0.868186 8.10942e+07 0.00386966 1.79196e+07 9.57971e+06 1.80141e+07 231 1.8035e+07 1.70195e+07 0.00292698 1.81654e+07 50.1802 0.0105098 0.995566 0 50.1314 GTEX-14C38-0626-SM-5S2TV 0 B1 2 pieces, relatively clean sections 6.4 Nerve Nerve - Tibial 0001323 513 1127 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991067 190135 0.976603 0.99324 0.817244 22555 1 76 0.00184343 181 0 8.00373e+07 0.023114 265720 8.0582e+07 8.3168e+06 22582 3.9817e+07 0 0.159359 0.99324 0.81172 8.00373e+07 0.00302161 1.75513e+07 8.7981e+06 1.77178e+07 195 1.76462e+07 1.57827e+07 0.00243123 1.78005e+07 50.2177 0.00329751 0.995413 0 50.236 GTEX-14C38-0726-SM-5SI6M 0 B1 4 pieces, minimeal dermal fat, squamous epithelium is ~35-40 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 523 1117 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991062 219561 0.975983 0.993157 0.776364 22928 1 76 0.00197661 173 0 8.47843e+07 0.0238027 435516 8.53685e+07 7.16972e+06 22958 4.22065e+07 0 0.199619 0.993157 0.771051 8.47843e+07 0.00308357 1.88331e+07 9.52553e+06 1.89686e+07 201 1.89398e+07 1.46084e+07 0.00252892 1.90377e+07 50.1289 0.0051016 0.995251 0 50.1792 GTEX-14C38-0826-SM-5S2U8 1 B1 2 pieces, mild goitre, regressive changes 6.6 Thyroid Thyroid 0002046 526 1114 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989764 332708 0.966961 0.992478 0.724501 24786 1 76 0.00203701 204 0 9.21346e+07 0.0327829 297372 9.28328e+07 9.8809e+06 24831 4.58192e+07 0 0.24246 0.992478 0.719051 9.21346e+07 0.00314333 2.00947e+07 9.86947e+06 2.02966e+07 210 2.03159e+07 1.38362e+07 0.00258866 2.03167e+07 50.001 0.00320331 0.995193 0 50.2499 GTEX-14C38-1026-SM-73KY7 1 B1 2 pieces, minimal fascial/vasuclar tissue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 549 1091 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992082 188078 0.978665 0.993062 0.828761 21301 1 76 0.00255523 153 0 6.3284e+07 0.0210554 646873 6.37261e+07 6.6076e+06 21317 3.15039e+07 0 0.149905 0.993062 0.823011 6.3284e+07 0.00311933 1.39321e+07 8.74885e+06 1.39728e+07 156 1.39747e+07 1.16267e+07 0.002837 1.39970e+07 50.04 0.0101508 0.994043 0 50.0729 GTEX-14C38-1226-SM-5S2UK 1 B1 2 pieces, minimal atherosis 6.1 Blood Vessel Artery - Coronary 0001621 562 1078 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988254 198656 0.97479 0.990695 0.834815 21522 1 76 0.00183522 167 0 7.48082e+07 0.0248821 291936 7.55108e+07 7.57612e+06 21537 3.7185e+07 0 0.139974 0.990695 0.827047 7.48082e+07 0.0030741 1.59297e+07 8.84878e+06 1.61325e+07 182 1.6037e+07 1.51695e+07 0.00245314 1.62086e+07 50.2661 0.00386615 0.993136 0 50.3164 GTEX-14C38-1326-SM-62LDK 1 B1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 570 1070 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989134 183304 0.981437 0.992821 0.831141 22132 1 76 0.00253899 267 0 8.35192e+07 0.0183885 2.74383e+06 8.41231e+07 5.96611e+06 22150 4.15236e+07 0 0.150296 0.992821 0.825174 8.35192e+07 0.00324123 1.83768e+07 1.37654e+07 1.83796e+07 275 1.83818e+07 1.10929e+07 0.0028888 1.86387e+07 50.347 0.0326169 0.996508 0 50.0037 GTEX-14C38-1426-SM-5RQHZ 1 B1 2 pieces, minimal chronic ischemic changes/fibrosis 6.9 Heart Heart - Left Ventricle 0006566 578 1062 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992565 170555 0.984111 0.993859 0.852434 20163 1 76 0.0018164 265 0 7.61956e+07 0.0157575 4.06925e+06 7.66664e+07 3.88519e+06 20168 3.79613e+07 0 0.131677 0.993859 0.847199 7.61956e+07 0.00261851 1.70217e+07 1.83717e+07 1.71457e+07 277 1.72305e+07 9.20858e+06 0.00221693 1.7026e+07 49.7016 0.0530773 0.995154 0 50.1815 GTEX-14C38-1526-SM-5RQJ7 1 B1 6 pieces, minimal congestion, no steatosis 6.3 Liver Liver 0001114 584 1056 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992531 292986 0.971163 0.993787 0.845862 20545 1 76 0.0020797 205 0 7.57055e+07 0.0279341 5.28963e+06 7.61787e+07 3.90907e+06 20555 3.76755e+07 0 0.125301 0.993787 0.840607 7.57055e+07 0.00283165 1.67048e+07 1.34768e+07 1.70023e+07 219 1.69836e+07 1.15545e+07 0.0024552 1.68191e+07 49.7567 0.0694371 0.995044 0 50.4412 GTEX-14C38-1726-SM-5RQJC 1 B1 2 pieces, ~20% adherent/interstitial fat, rep delineated. Trace adrenal meduall, ensquared, fairly well preserved 5.8 Adrenal Gland Adrenal Gland 0002369 595 1045 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990252 377917 0.963669 0.99159 0.807783 22329 1 76 0.00200123 206 0 7.87117e+07 0.036153 3.1945e+06 7.93793e+07 4.21598e+06 22353 3.91656e+07 0 0.155886 0.99159 0.800989 7.87117e+07 0.00281231 1.71198e+07 1.55614e+07 1.75251e+07 230 1.74389e+07 9.96614e+06 0.00240622 1.73146e+07 49.8212 0.0402435 0.992928 0 50.585 GTEX-14C38-2126-SM-5RQJO 1 B1 4 pieces, squamous mucosa up to ~0.4mm, 10-20% thickness 7.2 Esophagus Esophagus - Mucosa 0006920 601 1039 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992127 194811 0.976 0.99337 0.802274 20986 1 76 0.00212535 128 0 6.12696e+07 0.0238276 293734 6.16786e+07 3.06369e+06 21003 3.0511e+07 0 0.173726 0.99337 0.796954 6.12696e+07 0.00290996 1.37848e+07 8.56943e+06 1.38999e+07 144 1.38776e+07 1.1055e+07 0.00251716 1.38884e+07 50.0196 0.00476234 0.994612 0 50.2079 GTEX-14C38-2226-SM-793AW 1 B1 6 pieces, all target muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 605 1035 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992792 162061 0.971 0.993888 0.817568 21946 1 76 0.00218917 151 0 6.37541e+07 0.0288505 1.92255e+06 6.41462e+07 5.37705e+06 21967 3.17293e+07 0 0.153432 0.993888 0.812571 6.37541e+07 0.00279754 1.3974e+07 5.91686e+06 1.40757e+07 179 1.40984e+07 7.93975e+06 0.00249302 1.40186e+07 49.858 0.0299714 0.994983 0 50.1813 GTEX-14C38-2626-SM-5RQI4 3 B1 6 pieces, mucosa with advanced autolysis 5.7 Colon Colon - Transverse 0001157 620 1020 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 EXCLUDE 0.986909 144111 0.966504 0.987546 0.788586 22087 1 76 0.00217511 156 0 6.28743e+07 0.0331321 1.08519e+06 6.36672e+07 3.15858e+06 22111 3.12559e+07 0 0.177918 0.987546 0.778765 6.28743e+07 0.00297932 1.3766e+07 1.07336e+07 1.38126e+07 156 1.37776e+07 9.99561e+06 0.00257696 1.38456e+07 50.1232 0.0170447 0.988183 0 50.0845 GTEX-14C38-5004-SM-AN42A B1 Muscle Muscle - Skeletal 0011907 511 ChIP-Seq GTEX-14C38-5007-SM-AN429 B1 Heart Heart - Left Ventricle 0006566 577 ChIP-Seq GTEX-14C38-5010-SM-AN428 B1 Lung Lung 0008952 595 ChIP-Seq GTEX-14C39-0004-SM-5CV93 B1 Blood Whole Blood 0013756 657 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14C39-0004-SM-7DROE B1 Blood Whole Blood 0013756 657 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14C39-0005-SM-5NQBR B1 8.1 Blood Whole Blood 0013756 657 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.956909 331106 0.982031 0.95915 0.814824 17949 1 76 0.00206139 114 0 9.0309e+07 0.0154895 254797 9.41552e+07 1.25617e+07 17954 4.48645e+07 0 0.167208 0.95915 0.781538 9.0309e+07 0.00504099 2.12905e+07 1.49384e+08 2.16082e+07 149 2.14874e+07 2.55486e+07 0.00354771 2.16224e+07 50.1565 0.00270614 0.961391 0 50.3703 GTEX-14C39-0011-R10a-SM-AHZ77 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 663 ChIP-Seq GTEX-14C39-0011-R10b-SM-5YYBE B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 663 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 EXCLUDE 0.989868 968326 0.950029 0.990888 0.806381 25223 1 76 0.00253788 373 0 1.15831e+08 0.0496777 5.99021e+06 1.16896e+08 4.85122e+06 25246 5.76773e+07 0 0.143647 0.990888 0.799033 1.15831e+08 0.00305188 2.48514e+07 3.44512e+07 2.51015e+07 350 2.50044e+07 1.31752e+07 0.00279462 2.50575e+07 50.053 0.0512438 0.991907 0 50.2503 GTEX-14C39-0011-R10b-SM-CYKPP B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 663 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 RIP-Seq GTEX-14C39-0011-R11b-SM-5YYAF B1, A1 5.8 Brain Brain - Cerebellar Hemisphere 0002037 663 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990409 1.18744e+06 0.927976 0.991656 0.756113 23588 1 76 0.0025611 267 0 8.8848e+07 0.0717944 5.10226e+06 8.95956e+07 3.93844e+06 23610 4.42212e+07 0 0.171863 0.991656 0.749804 8.8848e+07 0.00322041 1.86862e+07 4.65723e+07 1.90264e+07 324 1.88082e+07 6.46188e+06 0.00289034 1.90276e+07 50.29 0.0569476 0.992902 0 50.451 GTEX-14C39-0011-R3b-SM-5YYA3 B1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 663 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991322 841987 0.95685 0.992611 0.824803 23742 1 76 0.00241047 370 0 9.88586e+07 0.0428167 6.03567e+06 9.95945e+07 4.56642e+06 23765 4.92299e+07 0 0.132047 0.992611 0.818709 9.88586e+07 0.00296952 2.13345e+07 3.48974e+07 2.16563e+07 344 2.14532e+07 1.00584e+07 0.00268963 2.16631e+07 50.2433 0.0606025 0.9939 0 50.3743 GTEX-14C39-0011-R5b-SM-5ZZV1 B1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 663 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994369 630773 0.953321 0.995401 0.800904 23640 1 76 0.00190296 268 0 8.34579e+07 0.0464859 5.36912e+06 8.38434e+07 7.40196e+06 23653 4.16188e+07 0 0.152416 0.995401 0.797221 8.34579e+07 0.00283819 1.79552e+07 3.12904e+07 1.80533e+07 283 1.79218e+07 7.44045e+06 0.00237009 1.81694e+07 50.343 0.0640374 0.996434 0 50.1363 GTEX-14C39-0011-R6b-SM-5YYAZ B1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 663 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 EXCLUDE 0.99201 940342 0.956614 0.993263 0.837244 23779 1 76 0.00241622 372 0 1.00101e+08 0.0429448 4.15863e+06 1.0078e+08 4.41198e+06 23800 4.9821e+07 0 0.11937 0.993263 0.831604 1.00101e+08 0.00307463 2.17477e+07 2.87165e+07 2.19079e+07 360 2.17435e+07 1.30166e+07 0.00274501 2.20536e+07 50.3539 0.0412643 0.994516 0 50.1835 GTEX-14C39-0126-SM-6128R 1 B1 6 pieces, atherosis layer up to ~0.5mm 5.8 Blood Vessel Artery - Aorta 0001496 692 989 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.990114 139536 0.974345 0.991491 0.790137 21138 1 76 0.00210013 140 0 7.0323e+07 0.0252866 184839 7.09266e+07 6.18017e+06 21157 3.50094e+07 0 0.184208 0.991491 0.783413 7.0323e+07 0.00325825 1.51208e+07 6.49653e+06 1.52027e+07 160 1.51378e+07 1.23474e+07 0.00267839 1.52852e+07 50.2423 0.00260606 0.992867 0 50.135 GTEX-14C39-0226-SM-5TDDW 1 B1 2 pieces, no significant abnormalities 7.3 Thyroid Thyroid 0002046 693 988 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.98828 170612 0.972567 0.991822 0.794904 22710 1 76 0.00221328 125 0 5.73248e+07 0.0271377 140367 5.77975e+07 6.81341e+06 22729 2.84777e+07 0 0.177663 0.991822 0.788404 5.73248e+07 0.00419321 1.25971e+07 5.52138e+06 1.26701e+07 129 1.2696e+07 1.05022e+07 0.00319971 1.27726e+07 50.1503 0.0024286 0.995364 0 50.1446 GTEX-14C39-0326-SM-5TDDX 1 B1 2 pieces, diffuse severe congestion, chronic, with superimosed acute pneumonitis/pneumonia 7.4 Lung Lung 0008952 694 987 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.980192 217077 0.977167 0.985063 0.812118 23641 1 76 0.00240014 149 0 7.12147e+07 0.0223399 346771 7.22946e+07 9.6587e+06 23659 3.53079e+07 0 0.165049 0.985063 0.799987 7.12147e+07 0.00455423 1.57237e+07 1.01154e+07 1.58704e+07 159 1.59082e+07 1.36551e+07 0.00347186 1.60293e+07 50.1897 0.00479664 0.989934 0 50.2323 GTEX-14C39-0326-SM-CYKOQ 1 B1 2 pieces, diffuse severe congestion, chronic, with superimosed acute pneumonitis/pneumonia 7.4 Lung Lung 0008952 694 987 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-14C39-0526-SM-664OF 1 B1 2 pieces, spermatogenesis is present 6.7 Testis Testis 0000473 696 985 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991769 290369 0.924684 0.992491 0.722559 34022 1 76 0.00231028 287 0 1.06016e+08 0.0749381 935297 1.06818e+08 6.74734e+06 34095 5.28284e+07 0 0.202125 0.992491 0.717133 1.06016e+08 0.00292318 2.18297e+07 1.57101e+07 2.19135e+07 262 2.19191e+07 1.77383e+07 0.00261651 2.18918e+07 49.9688 0.00875599 0.993212 0 50.0958 GTEX-14C39-0726-SM-5RQIK 1 B1 2 pieces, no abnormalities 6.3 Heart Heart - Atrial Appendage 0006631 699 982 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992351 130405 0.983681 0.993334 0.8384 20828 1 76 0.00183381 266 0 7.64477e+07 0.0161818 3.2082e+06 7.69607e+07 3.60228e+06 20836 3.81053e+07 0 0.145281 0.993334 0.832812 7.64477e+07 0.00257643 1.68416e+07 2.06816e+07 1.67801e+07 271 1.6773e+07 7.89267e+06 0.00220475 1.69166e+07 50.2132 0.0416862 0.994317 0 49.9085 GTEX-14C39-0826-SM-5TDDU 1 B1 2 pieces, minimal fascia/vascular elements present 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 700 981 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986421 268566 0.981941 0.990729 0.829267 22070 1 76 0.0021742 169 0 8.07008e+07 0.0177599 225409 8.1456e+07 9.85319e+06 22081 4.00679e+07 0 0.152674 0.990729 0.821579 8.07008e+07 0.00409043 1.78101e+07 9.56299e+06 1.79449e+07 185 1.8025e+07 1.65368e+07 0.00312815 1.80708e+07 50.0634 0.00276725 0.995037 0 50.1885 GTEX-14C39-0926-SM-5TDDV 1 B1 2 pieces, diffuse moderate-marked chronic ischemic changes/intersitital fibrosis 5.9 Heart Heart - Left Ventricle 0006566 702 979 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.984769 135418 0.989564 0.988953 0.841637 18101 1 76 0.00198307 264 0 7.08104e+07 0.0103921 5.41176e+06 7.16014e+07 8.89006e+06 18104 3.51792e+07 0 0.147927 0.988953 0.832339 7.08104e+07 0.0039306 1.57453e+07 4.04957e+07 1.5264e+07 321 1.51493e+07 3.12774e+06 0.00295271 1.60688e+07 51.4727 0.0755818 0.993136 0 49.2239 GTEX-14C39-1026-SM-73KWG 1 B1 "2 pieces, some ares approach autolysis score ""2"" with microfoci of moderately advanced saponification. Islets still well visualized, just beginning to degrade." 6.3 Pancreas Pancreas 0001150 702 979 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991261 155111 0.971697 0.992709 0.828707 21914 1 76 0.00422041 126 0 9.25028e+07 0.0280896 248788 9.31822e+07 4.30032e+06 21932 4.60546e+07 0 0.14299 0.992709 0.822665 9.25028e+07 0.00455527 2.10611e+07 2.08375e+07 2.13645e+07 141 2.13224e+07 2.51613e+07 0.00438759 2.12481e+07 49.9127 0.00266991 0.994156 0 50.3576 GTEX-14C39-1626-SM-5S2P4 1 B1 6 pieces, target muscularis, trace 'contaminant' autolyzed mucosa 5.8 Colon Colon - Sigmoid 0001159 719 962 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992304 262406 0.972929 0.99366 0.776299 22992 1 76 0.00184767 146 0 6.94643e+07 0.0268047 631770 6.99075e+07 4.86844e+06 23015 3.4552e+07 0 0.196631 0.99366 0.771377 6.94643e+07 0.00269942 1.51107e+07 6.99405e+06 1.52892e+07 166 1.51965e+07 1.09305e+07 0.00227297 1.53002e+07 50.17 0.00903723 0.995017 0 50.2936 GTEX-14C39-1726-SM-5RQIL 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 720 961 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992232 160374 0.97404 0.992998 0.775736 22065 1 76 0.00213595 195 0 7.49231e+07 0.0257293 821823 7.54514e+07 3.88807e+06 22096 3.7324e+07 0 0.198304 0.992998 0.770304 7.49231e+07 0.00276625 1.64326e+07 9.09126e+06 1.6596e+07 185 1.65427e+07 1.1849e+07 0.00245086 1.6544e+07 50.0019 0.0108921 0.993763 0 50.2473 GTEX-14C39-1826-SM-5ZZW4 1 B1 6 pieces, glandular mucosa autolyzed but residual target lymphoid aggregates are ~40% of tissue, rep delineated 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 724 957 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305,LCSET-5806 06/20/2014 TruSeq.v1 RNASEQ 0.989797 486385 0.966022 0.992378 0.75739 28044 1 76 0.00213053 527 0 2.1281e+08 0.033715 1.96077e+06 2.14445e+08 2.5309e+07 28126 1.05823e+08 0 0.208632 0.992378 0.751617 2.1281e+08 0.0033966 4.61256e+07 2.12623e+07 4.63996e+07 477 4.62566e+07 3.04393e+07 0.00276192 4.67805e+07 50.2816 0.00914346 0.99496 0 50.1481 GTEX-14C39-1926-SM-5ZZW5 3 B1 6 pieces, mucosa with advanced autolysis/sloughed 6.1 Colon Colon - Transverse 0001157 727 954 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.990678 132107 0.961495 0.991829 0.740964 27265 1 76 0.00235803 210 0 8.46608e+07 0.0376605 1.06484e+06 8.53583e+07 7.78462e+06 27306 4.21693e+07 0 0.220531 0.991829 0.73491 8.46608e+07 0.00327138 1.85375e+07 1.07968e+07 1.85731e+07 219 1.8537e+07 1.26853e+07 0.00281418 1.86683e+07 50.1764 0.0124749 0.99298 0 50.048 GTEX-14C39-2026-SM-664OG 2 B1 2 pieces, all cortex, moderate autolysis; adherent fat (delineated) is ~10-15% specimen 6.3 Adrenal Gland Adrenal Gland 0002369 732 949 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 EXCLUDE 0.990025 419966 0.960027 0.990374 0.82692 23107 1 76 0.00223472 371 0 1.00246e+08 0.0397778 2.45064e+06 1.0122e+08 6.89345e+06 23133 4.98385e+07 0 0.133107 0.990374 0.81896 1.00246e+08 0.00329901 2.21384e+07 2.17569e+07 2.22409e+07 376 2.214e+07 1.05707e+07 0.00276668 2.22791e+07 50.1566 0.024211 0.990724 0 50.1154 GTEX-14C39-2126-SM-664OH 2 B1 6 pieces, glomeruli present, tubules autolyzed 6.3 Kidney Kidney - Cortex 0001225 733 948 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991395 551588 0.962816 0.992135 0.824651 22981 1 76 0.0020882 370 0 9.58685e+07 0.0370195 5.72743e+06 9.66285e+07 6.03051e+06 22997 4.7711e+07 0 0.138165 0.992135 0.818165 9.58685e+07 0.00296451 2.10072e+07 3.39946e+07 2.12002e+07 366 2.10385e+07 9.13922e+06 0.00252603 2.12503e+07 50.2504 0.0592727 0.992875 0 50.2286 GTEX-14C39-2426-SM-5S2U5 1 B1 2 pieces, ~5-10% interstitial fat, slightly less well preserved than typical 7.4 Muscle Muscle - Skeletal 0011907 741 940 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993096 244354 0.985875 0.995071 0.87586 19876 1 76 0.00162264 278 0 9.12648e+07 0.0138797 982504 9.17168e+07 9.03658e+06 19882 4.54631e+07 0 0.110015 0.995071 0.871542 9.12648e+07 0.00281189 2.01287e+07 1.30943e+07 2.02116e+07 294 2.01392e+07 1.80797e+07 0.00221609 2.03716e+07 50.2869 0.0107124 0.997046 0 50.1027 GTEX-14C39-2526-SM-5S2UH 0 B1 2 pieces, minimal vascular elements/fascia, good specimen 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 741 940 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991323 253461 0.973432 0.993239 0.777107 23153 1 76 0.00195407 168 0 8.39802e+07 0.0262641 378033 8.45519e+07 7.95355e+06 23182 4.18106e+07 0 0.196324 0.993239 0.771853 8.39802e+07 0.0030466 1.8406e+07 9.84657e+06 1.85548e+07 202 1.85248e+07 1.42495e+07 0.00249928 1.8594e+07 50.0933 0.00447102 0.995155 0 50.2013 GTEX-14C39-2626-SM-5S2QD 0 B1 2 pieces, clean, minimal atherosis, good specimen 5.7 Blood Vessel Artery - Tibial 0007610 743 938 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991694 121184 0.971122 0.99262 0.806393 20623 1 76 0.00179626 129 0 5.52999e+07 0.0285498 241403 5.5711e+07 3.25821e+06 20635 2.75134e+07 0 0.164729 0.99262 0.800442 5.52999e+07 0.00265082 1.18441e+07 5.31891e+06 1.1986e+07 136 1.19083e+07 1.01489e+07 0.00222314 1.19787e+07 50.1475 0.00433313 0.993546 0 50.2977 GTEX-14C39-2726-SM-7DUEK 0 B1 2 pieces, clean, minimal adherent fat, minute ~0.5mm nubbin delineated 7.1 Nerve Nerve - Tibial 0001323 744 937 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990112 430299 0.958715 0.990692 0.719316 27240 1 76 0.00289662 217 0 9.56089e+07 0.0409969 469232 9.65072e+07 9.32225e+06 27301 4.75428e+07 0 0.239399 0.990692 0.712621 9.56089e+07 0.00447127 2.0889e+07 1.37992e+07 2.09905e+07 214 2.10717e+07 1.41022e+07 0.00368349 2.08693e+07 49.7587 0.00486215 0.991273 0 50.1212 GTEX-14C39-2926-SM-73KU3 1 B1 1 piece, all adenohypophysis 6.5 Pituitary Pituitary 0000007 787 894 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992789 356154 0.958596 0.993598 0.72411 26789 1 76 0.00413186 272 0 1.09282e+08 0.0411555 443905 1.09986e+08 4.7505e+06 26853 5.44321e+07 0 0.234486 0.993598 0.719474 1.09282e+08 0.00383228 2.27012e+07 1.43489e+07 2.28869e+07 264 2.2947e+07 1.63297e+07 0.00398219 2.27296e+07 49.762 0.00403601 0.994406 0 50.2037 GTEX-14C39-3026-SM-5S2QE 1 B1 2 pieces, unusually edematous 6.4 Brain Brain - Cerebellum 0002037 789 892 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.991587 453351 0.933205 0.992937 0.711053 24249 1 76 0.00187743 158 0 7.94048e+07 0.066493 1.19752e+06 7.99696e+07 4.27878e+06 24277 3.95189e+07 0 0.222152 0.992937 0.706031 7.94048e+07 0.00268619 1.68112e+07 2.22467e+07 1.71232e+07 200 1.70745e+07 8.6917e+06 0.00228126 1.69669e+07 49.842 0.0149747 0.994287 0 50.4597 GTEX-14C39-3126-SM-5ZZW6 1 B1 2 pieces, unusually edematous 7.2 Brain Brain - Cortex 0001870 791 890 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992917 618967 0.95205 0.994538 0.813449 23677 1 76 0.00190685 268 0 7.98645e+07 0.0476469 3.34279e+06 8.03032e+07 7.31574e+06 23695 3.9794e+07 0 0.138601 0.994538 0.809006 7.98645e+07 0.00314979 1.7272e+07 2.80076e+07 1.74053e+07 276 1.73249e+07 9.11039e+06 0.00252731 1.74689e+07 50.2068 0.0416271 0.996158 0 50.1922 GTEX-14C5O-0002-SM-5CV8D C1 Blood Whole Blood 0013756 522 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14C5O-0002-SM-7DRQF C1 Blood Whole Blood 0013756 522 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14C5O-0005-SM-5P9ER C1 6.9 Blood Whole Blood 0013756 522 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.944208 345148 0.988627 0.944994 0.827206 17112 1 76 0.00303995 260 0 1.53905e+08 0.00978736 390089 1.62864e+08 5.49725e+06 17114 7.66321e+07 0 0.161422 0.944994 0.781705 1.53905e+08 0.00387866 3.68647e+07 3.0765e+08 3.79061e+07 279 3.77542e+07 4.84283e+07 0.00345896 3.71549e+07 49.5999 0.00239519 0.945781 0 50.6964 GTEX-14C5O-0011-R10a-SM-6872F C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 530 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991498 841607 0.958808 0.992342 0.829046 24043 1 76 0.0022168 372 0 1.02894e+08 0.0407941 4.15052e+06 1.03688e+08 5.68264e+06 24066 5.12654e+07 0 0.129762 0.992342 0.822697 1.02894e+08 0.00276552 2.25207e+07 2.96456e+07 2.25429e+07 338 2.23666e+07 1.24307e+07 0.00249093 2.27696e+07 50.4464 0.0400288 0.993185 0 50.0246 GTEX-14C5O-0011-R10a-SM-AHZN3 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 530 ChIP-Seq GTEX-14C5O-0011-R10a-SM-CYKSO C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 530 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 RIP-Seq GTEX-14C5O-0011-R11b-SM-6872H C1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 530 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989722 464789 0.941967 0.990564 0.726043 23544 1 76 0.0025494 200 0 8.31255e+07 0.0576218 1.38493e+06 8.39174e+07 4.56432e+06 23580 4.13762e+07 0 0.215924 0.990564 0.719192 8.31255e+07 0.00304621 1.79263e+07 1.37877e+07 1.79492e+07 234 1.79124e+07 9.52841e+06 0.00279759 1.80255e+07 50.1572 0.0165034 0.991406 0 50.0319 GTEX-14C5O-0011-R1b-SM-6AJBW C1, A1 8.2 Brain Brain - Hippocampus 0001954 530 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991762 674161 0.949676 0.993931 0.804723 23508 1 76 0.0022071 201 0 7.14634e+07 0.0499006 2.15123e+06 7.18997e+07 4.92233e+06 23528 3.55725e+07 0 0.144952 0.993931 0.799839 7.14634e+07 0.0030485 1.5499e+07 2.08454e+07 1.55473e+07 204 1.55586e+07 9.0724e+06 0.00262688 1.56409e+07 50.132 0.0299199 0.9961 0 50.0777 GTEX-14C5O-0011-R2a-SM-5ZZV2 C1, A1 7.9 Brain Brain - Substantia nigra 0002038 530 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.9945 380207 0.962958 0.995548 0.828037 23098 1 76 0.00218828 207 0 7.35896e+07 0.036715 3.31514e+06 7.39187e+07 6.47498e+06 23116 3.669e+07 0 0.134921 0.995548 0.824351 7.35896e+07 0.00313335 1.62977e+07 1.38954e+07 1.63548e+07 238 1.62681e+07 9.99341e+06 0.00266032 1.64573e+07 50.2891 0.0448484 0.996597 0 50.0875 GTEX-14C5O-0011-R6a-SM-5YYB6 C1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 530 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991684 901020 0.95342 0.992836 0.807281 25293 1 76 0.00278258 272 0 1.10688e+08 0.0461252 4.42244e+06 1.11487e+08 5.10273e+06 25326 5.51133e+07 0 0.14614 0.992836 0.801497 1.10688e+08 0.00328659 2.4115e+07 2.93169e+07 2.42543e+07 329 2.42074e+07 1.48178e+07 0.00303429 2.42926e+07 50.0878 0.0396678 0.993988 0 50.144 GTEX-14C5O-0011-R7b-SM-5YYAH C1, A1 9.1 Brain Brain - Putamen (basal ganglia) 0001874 530 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992116 736533 0.954893 0.993084 0.816596 24326 1 76 0.00270543 270 0 9.5255e+07 0.0446065 2.6026e+06 9.59184e+07 4.16529e+06 24355 4.74273e+07 0 0.138298 0.993084 0.810948 9.5255e+07 0.00323626 2.07631e+07 2.10331e+07 2.08295e+07 290 2.07865e+07 1.34279e+07 0.00297059 2.09074e+07 50.145 0.0271335 0.994052 0 50.0798 GTEX-14C5O-0011-R8a-SM-5YYAG C1, A1 7.6 Brain Brain - Hypothalamus 0001898 530 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991026 790093 0.953784 0.992419 0.799837 25108 1 76 0.0027699 273 0 9.20142e+07 0.0457823 2.01712e+06 9.27171e+07 3.9728e+06 25141 4.57849e+07 0 0.153946 0.992419 0.793774 9.20142e+07 0.00337778 2.01125e+07 2.12982e+07 2.0239e+07 277 2.02079e+07 1.31207e+07 0.00307341 2.02797e+07 50.0887 0.0217556 0.993811 0 50.1569 GTEX-14C5O-0126-SM-5SI6N 1 C1 6 pieces; small amount of internal fat, epidermis measures 35 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 654 511 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989345 175427 0.975281 0.992234 0.778823 23474 1 76 0.00208185 249 0 8.48314e+07 0.0244529 422275 8.54953e+07 8.4579e+06 23506 4.22008e+07 0 0.196458 0.992234 0.772775 8.48314e+07 0.0031222 1.848e+07 8.94453e+06 1.85768e+07 214 1.86105e+07 1.50396e+07 0.00260051 1.8679e+07 50.0918 0.00493916 0.995123 0 50.1306 GTEX-14C5O-0226-SM-5SI6O 1 C1 2 pieces 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 656 509 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989578 225147 0.975968 0.992518 0.797295 23622 1 76 0.00208691 283 0 1.10567e+08 0.0236444 648656 1.11401e+08 1.06159e+07 23655 5.49897e+07 0 0.178674 0.992518 0.79133 1.10567e+08 0.00324663 2.41773e+07 1.01297e+07 2.43573e+07 312 2.43816e+07 1.96456e+07 0.00266505 2.44617e+07 50.082 0.00582272 0.995459 0 50.1854 GTEX-14C5O-0326-SM-5ZZUX 1 C1 6 pieces; well trimmed 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 685 481 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993744 138459 0.974262 0.994844 0.775319 22334 1 76 0.00215033 189 0 7.48471e+07 0.0255066 359500 7.52351e+07 6.71432e+06 22367 3.73113e+07 0 0.198943 0.994844 0.771321 7.48471e+07 0.00322585 1.64641e+07 7.65679e+06 1.65125e+07 174 1.64846e+07 1.2639e+07 0.0026875 1.6572e+07 50.1323 0.00477836 0.995944 0 50.0733 GTEX-14C5O-0426-SM-5ZZUW 0 C1 2 pieces; relatively well trimmed, small portion of attached fat on one piece 7 Nerve Nerve - Tibial 0001323 694 473 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99245 191754 0.971064 0.993602 0.736823 22721 1 76 0.00224697 171 0 7.20776e+07 0.0286111 316477 7.25417e+07 6.74681e+06 22755 3.5909e+07 0 0.234241 0.993602 0.732109 7.20776e+07 0.00326635 1.59779e+07 6.60268e+06 1.6041e+07 158 1.6009e+07 1.13344e+07 0.00275607 1.60917e+07 50.1289 0.00436269 0.994755 0 50.0986 GTEX-14C5O-0526-SM-62LEI 1 C1 2 pieces; intimal thickening 7 Blood Vessel Artery - Tibial 0007610 695 472 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987337 135897 0.976439 0.991386 0.839167 20249 1 76 0.00270824 140 0 6.6827e+07 0.0231542 399824 6.74077e+07 4.94315e+06 20261 3.31951e+07 0 0.137272 0.991386 0.831938 6.6827e+07 0.00366419 1.43112e+07 5.41673e+06 1.44707e+07 149 1.44861e+07 1.35962e+07 0.00318426 1.45413e+07 50.0949 0.00593143 0.995434 0 50.2771 GTEX-14C5O-0626-SM-664N2 0 C1 2 pieces; scant internal fat 8.7 Muscle Muscle - Skeletal 0011907 713 455 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991305 144363 0.982372 0.992484 0.873068 20411 1 76 0.00306538 275 0 9.89768e+07 0.0173353 1.197e+06 9.97263e+07 6.4555e+06 20426 4.92957e+07 0 0.109304 0.992484 0.866506 9.89768e+07 0.0038938 2.12854e+07 8.95148e+06 2.1455e+07 264 2.13895e+07 2.0968e+07 0.0034791 2.14548e+07 50.0761 0.0120029 0.993663 0 50.1984 GTEX-14C5O-0626-SM-CYKQH 0 C1 2 pieces; scant internal fat 8.7 Muscle Muscle - Skeletal 0011907 713 455 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-14C5O-0826-SM-5TDEG 1 C1 2 pieces; preserved follicular architecture with some evidence of hyperplasia 7.6 Thyroid Thyroid 0002046 725 444 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986806 215399 0.966643 0.990502 0.736673 23239 1 76 0.00250477 129 0 6.49229e+07 0.0329842 365513 6.55455e+07 8.1676e+06 23273 3.22363e+07 0 0.22997 0.990502 0.729676 6.49229e+07 0.00437192 1.41775e+07 7.75945e+06 1.42946e+07 141 1.43227e+07 9.81487e+06 0.00343486 1.43834e+07 50.1058 0.00557648 0.994198 0 50.2056 GTEX-14C5O-0926-SM-793DM 0 C1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 727 442 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992593 151093 0.979199 0.99384 0.808653 22025 1 76 0.00298272 144 0 6.83366e+07 0.0204743 387661 6.87601e+07 9.73304e+06 22046 3.40447e+07 0 0.170546 0.99384 0.803672 6.83366e+07 0.00347939 1.51164e+07 7.30665e+06 1.51521e+07 155 1.51592e+07 1.25184e+07 0.00323074 1.51966e+07 50.0616 0.00563787 0.995087 0 50.059 GTEX-14C5O-1126-SM-5TDEH 2 C1 2 pieces; some congestion and emphysematous change, bronchitis 7.3 Lung Lung 0008952 733 437 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.986816 179375 0.973361 0.989689 0.790774 23351 1 76 0.00249147 144 0 6.74652e+07 0.0262969 315989 6.81681e+07 7.84813e+06 23376 3.35035e+07 0 0.182587 0.989689 0.782621 6.74652e+07 0.00441968 1.47829e+07 6.85209e+06 1.48922e+07 158 1.48605e+07 1.09008e+07 0.00345278 1.50061e+07 50.2437 0.00463544 0.992563 0 50.1842 GTEX-14C5O-1126-SM-CYKO3 2 C1 2 pieces; some congestion and emphysematous change, bronchitis 7.3 Lung Lung 0008952 733 437 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-14C5O-1226-SM-664N3 1 C1 2 pieces; large portion of both is blood/clot 6.8 Heart Heart - Atrial Appendage 0006631 735 436 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.98451 140301 0.978741 0.98469 0.865339 20840 1 76 0.00261146 203 0 8.0134e+07 0.0210936 2.50348e+06 8.13799e+07 5.69625e+06 20850 3.98049e+07 0 0.113402 0.98469 0.85209 8.0134e+07 0.00369945 1.73115e+07 1.07861e+07 1.74461e+07 231 1.72384e+07 1.19118e+07 0.00315536 1.75245e+07 50.4115 0.0307629 0.984869 0 50.1936 GTEX-14C5O-1326-SM-5S2UW 1 C1 2 pieces; some hypertrophy 5.8 Heart Heart - Left Ventricle 0006566 737 434 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.988175 163912 0.987039 0.990234 0.837971 17759 1 76 0.00260884 367 0 8.14113e+07 0.0129163 4.58803e+06 8.22143e+07 8.25838e+06 17762 4.05464e+07 0 0.149068 0.990234 0.829787 8.14113e+07 0.00378545 1.7828e+07 4.61598e+07 1.78669e+07 340 1.77796e+07 3.66314e+06 0.00319592 1.79807e+07 50.2811 0.0558058 0.992293 0 50.0545 GTEX-14C5O-1326-SM-CYKQM 1 C1 2 pieces; some hypertrophy 5.8 Heart Heart - Left Ventricle 0006566 737 434 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 RIP-Seq GTEX-14C5O-1426-SM-5RQI8 1 C1 2 pieces; atherosclerosis 6.9 Blood Vessel Artery - Coronary 0001621 742 430 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989171 145921 0.973058 0.990294 0.777259 21728 1 76 0.0023335 143 0 7.17433e+07 0.0265801 225436 7.24464e+07 3.63255e+06 21755 3.56761e+07 0 0.195799 0.990294 0.769715 7.17433e+07 0.00313933 1.55033e+07 5.6989e+06 1.56041e+07 158 1.55801e+07 1.26281e+07 0.00273596 1.56095e+07 50.0472 0.00311176 0.991417 0 50.162 GTEX-14C5O-1526-SM-7DHKT 1 C1 6 pieces; atherosclerosis 7.3 Blood Vessel Artery - Aorta 0001496 743 429 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.98977 116290 0.975562 0.990874 0.799902 22098 1 76 0.00372476 171 0 8.90373e+07 0.0240444 326957 8.98574e+07 6.95656e+06 22121 4.42732e+07 0 0.17566 0.990874 0.792603 8.90373e+07 0.00548968 1.9182e+07 7.68212e+06 1.93238e+07 193 1.93118e+07 1.69428e+07 0.00460623 1.9285e+07 49.9652 0.00363862 0.991978 0 50.1841 GTEX-14C5O-1626-SM-73KYH 1 C1 6 pieces; superficially sloughing 7.5 Esophagus Esophagus - Mucosa 0006920 744 429 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991668 269480 0.969939 0.993024 0.733158 23358 1 76 0.00282087 164 0 8.74657e+07 0.029828 506969 8.80802e+07 8.81584e+06 23391 4.35464e+07 0 0.236781 0.993024 0.728044 8.74657e+07 0.00349445 1.94459e+07 1.01211e+07 1.94344e+07 183 1.94731e+07 1.40843e+07 0.0031572 1.95296e+07 50.0724 0.00575577 0.994379 0 49.9852 GTEX-14C5O-1726-SM-5RQI9 1 C1 6 pieces; predominantly well trimmed, few with attachments of fat and nerve 7.1 Esophagus Esophagus - Muscularis 0004648 746 428 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991878 163544 0.975574 0.992932 0.811426 22921 1 76 0.00223132 210 0 9.01499e+07 0.0241488 844412 9.07917e+07 4.44241e+06 22948 4.48868e+07 0 0.164148 0.992932 0.80569 9.01499e+07 0.00297541 1.96207e+07 7.95169e+06 1.98298e+07 247 1.97909e+07 1.61243e+07 0.00260297 1.97553e+07 49.9549 0.00930055 0.993986 0 50.2649 GTEX-14C5O-2026-SM-5YYB1 2 C1 6 pieces; glomeruli in all sections, occasional sclerotic glomeruli 5.9 Kidney Kidney - Cortex 0001225 755 421 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991053 293589 0.97334 0.992255 0.858349 23012 1 76 0.00297507 372 0 1.11378e+08 0.0264636 1.30105e+07 1.12248e+08 5.09056e+06 23030 5.54447e+07 0 0.114991 0.992255 0.851702 1.11378e+08 0.00363204 2.49576e+07 2.40489e+07 2.50957e+07 383 2.49757e+07 1.29905e+07 0.00330316 2.52019e+07 50.2254 0.115909 0.993457 0 50.138 GTEX-14C5O-2226-SM-5ZZW7 2 C1 6 pieces; well trimmed 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 758 419 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993084 117182 0.97179 0.994418 0.797617 23882 1 76 0.00228303 142 0 6.53451e+07 0.0279912 1.15022e+06 6.5712e+07 5.75035e+06 23898 3.2552e+07 0 0.174173 0.994418 0.793165 6.53451e+07 0.00345669 1.41498e+07 6.42918e+06 1.42352e+07 155 1.41722e+07 9.94481e+06 0.00286907 1.42957e+07 50.2169 0.017504 0.995751 0 50.1505 GTEX-14C5O-2326-SM-73KYU 2 C1 2 pieces; spermatogenesis is reduced 6 Testis Testis 0000473 760 417 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.990014 210412 0.923072 0.991245 0.666484 30804 1 76 0.00286815 126 0 5.64456e+07 0.0766794 741594 5.69442e+07 5.87392e+06 30859 2.80991e+07 0 0.256589 0.991245 0.660648 5.64456e+07 0.00344746 1.18784e+07 9.25947e+06 1.18787e+07 119 1.19026e+07 7.7032e+06 0.00315745 1.19202e+07 50.0369 0.0130232 0.992475 0 50.0007 GTEX-14C5O-2526-SM-73KU2 3 C1 5 pieces; full thickness, few with attached fat, diverticulum, mucosa is moderately to severely autolyzed 5.8 Colon Colon - Transverse 0001157 762 416 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989236 325848 0.9736 0.990422 0.842864 23470 1 76 0.00418892 274 0 1.03979e+08 0.0260889 1.01026e+06 1.04985e+08 5.00523e+06 23490 5.17063e+07 0 0.130736 0.990422 0.834791 1.03979e+08 0.00452911 2.23231e+07 1.04797e+07 2.26132e+07 263 2.25915e+07 1.8577e+07 0.00435881 2.2466e+07 49.8608 0.00962291 0.991608 0 50.3228 GTEX-14C5O-2626-SM-5RQI5 2 C1 6 pieces; predominantly well trimmed 5.8 Colon Colon - Sigmoid 0001159 765 414 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.988659 183284 0.976882 0.989918 0.846906 20957 1 76 0.00216956 163 0 7.15628e+07 0.0228845 599296 7.22917e+07 3.98701e+06 20967 3.55751e+07 0 0.129976 0.989918 0.838367 7.15628e+07 0.00314093 1.54939e+07 6.4413e+06 1.56633e+07 181 1.55791e+07 1.25862e+07 0.00265463 1.56679e+07 50.1421 0.00828997 0.991176 0 50.2719 GTEX-14C5O-2826-SM-5RQI6 2 C1 2 pieces; predominantly stroma with some glands with sloughing epithelium, small component of skeletal muscle in one piece 6.8 Prostate Prostate 0002367 773 407 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989962 133940 0.973075 0.990851 0.834616 22656 1 76 0.00212493 170 0 7.6604e+07 0.0266501 901407 7.73113e+07 3.66971e+06 22671 3.81081e+07 0 0.138459 0.990851 0.826981 7.6604e+07 0.00292393 1.65261e+07 6.43126e+06 1.665e+07 198 1.65454e+07 1.31556e+07 0.00252407 1.6702e+07 50.2355 0.0116594 0.99174 0 50.1867 GTEX-14C5O-2926-SM-5RQI1 1 C1 4 pieces; mild to moderate autolysis 7.1 Brain Brain - Cerebellum 0002037 797 383 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990846 407562 0.935037 0.991681 0.68795 23475 1 76 0.002571 128 0 7.36732e+07 0.0645949 1.16875e+06 7.42913e+07 3.6434e+06 23505 3.66559e+07 0 0.247087 0.991681 0.682227 7.36732e+07 0.00325487 1.5761e+07 1.81875e+07 1.59493e+07 164 1.59482e+07 8.03202e+06 0.00291265 1.58237e+07 49.804 0.0157321 0.992516 0 50.2969 GTEX-14C5O-3026-SM-5YYB2 1 C1 4 pieces 7.5 Brain Brain - Cortex 0001870 799 382 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990154 608370 0.955202 0.991411 0.809456 24071 1 76 0.00280374 270 0 9.7483e+07 0.0443658 3.01746e+06 9.83276e+07 4.60176e+06 24089 4.85416e+07 0 0.145746 0.991411 0.802503 9.7483e+07 0.00336749 2.12019e+07 2.92803e+07 2.14058e+07 297 2.13146e+07 1.27621e+07 0.00308526 2.14097e+07 50.1113 0.0306879 0.992668 0 50.2393 GTEX-14C5O-3126-SM-664NK 1 C1 1 piece; adenohypophysis and dura 7.1 Pituitary Pituitary 0000007 800 381 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992192 257822 0.965368 0.992845 0.777479 24569 1 76 0.00247819 205 0 8.73401e+07 0.0343774 468444 8.79694e+07 5.60348e+06 24606 4.34837e+07 0 0.187889 0.992845 0.771917 8.73401e+07 0.00325085 1.85231e+07 1.09998e+07 1.8659e+07 220 1.86085e+07 1.41043e+07 0.00286426 1.86315e+07 50.0308 0.00532508 0.993499 0 50.1827 GTEX-14DAQ-0004-SM-5CV9E C1 Blood Whole Blood 0013756 410 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14DAQ-0004-SM-7DROH C1 Blood Whole Blood 0013756 410 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14DAQ-0005-SM-5NQ7B C1 8.6 Blood Whole Blood 0013756 410 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4906 03/22/2014 TruSeq.v1 RNASEQ 0.991858 574549 0.966741 0.993101 0.735559 21485 1 76 0.0023821 138 0 8.41053e+07 0.0327155 384648 8.46896e+07 6.58244e+06 21509 4.18838e+07 0 0.231181 0.993101 0.730485 8.41053e+07 0.00324371 1.86973e+07 4.145e+07 1.89695e+07 162 1.89734e+07 1.52851e+07 0.00281236 1.88109e+07 49.7851 0.00454186 0.994345 0 50.3613 GTEX-14DAQ-0011-R10a-SM-AHZNB C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 445 ChIP-Seq GTEX-14DAQ-0011-R11a-SM-664NO C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 445 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989857 614754 0.942642 0.990794 0.723798 24201 1 76 0.00258363 202 0 9.12655e+07 0.0568189 864808 9.21135e+07 5.60034e+06 24241 4.53618e+07 0 0.218844 0.990794 0.717134 9.12655e+07 0.00352203 1.96711e+07 1.57176e+07 1.97072e+07 220 1.96811e+07 1.19891e+07 0.00305238 1.97879e+07 50.1353 0.0093885 0.991731 0 50.0459 GTEX-14DAQ-0011-R3b-SM-5YYAJ C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 445 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990433 697319 0.957287 0.9923 0.817726 23450 1 76 0.00283883 267 0 8.8523e+07 0.042448 5.78666e+06 8.92098e+07 4.18888e+06 23465 4.40477e+07 0 0.139561 0.9923 0.81143 8.8523e+07 0.00361403 1.89813e+07 3.3234e+07 1.93827e+07 316 1.91054e+07 7.65265e+06 0.0032257 1.9406e+07 50.3903 0.0648657 0.994168 0 50.5231 GTEX-14DAQ-0011-R4a-SM-5YYAI C1, A1 7.1 Brain Brain - Amygdala 0001876 445 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991688 696183 0.954563 0.992955 0.809944 23366 1 76 0.00283885 371 0 8.74692e+07 0.0452604 8.1456e+06 8.80898e+07 3.84673e+06 23388 4.35392e+07 0 0.144619 0.992955 0.804238 8.74692e+07 0.00352937 1.88606e+07 3.41013e+07 1.91284e+07 340 1.88041e+07 6.47651e+06 0.00318367 1.93005e+07 50.6514 0.0924692 0.994222 0 50.3525 GTEX-14DAQ-0011-R5b-SM-5YYAK C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 445 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991006 882128 0.951645 0.992402 0.794282 23968 1 76 0.00278229 268 0 9.97931e+07 0.048135 5.42528e+06 1.00557e+08 4.39859e+06 23984 4.97105e+07 0 0.157363 0.992402 0.788247 9.97931e+07 0.00327959 2.10831e+07 4.62076e+07 2.16429e+07 321 2.13252e+07 8.72315e+06 0.00303059 2.15222e+07 50.2298 0.0539523 0.993799 0 50.6551 GTEX-14DAQ-0126-SM-5S2MQ 0 C1 6 pieces, minimal dermal fat, squamous epithelium is ~35 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 448 628 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992742 212340 0.972879 0.99438 0.750015 24062 1 76 0.00186338 195 0 7.61663e+07 0.026879 299159 7.65968e+07 5.30912e+06 24092 3.79227e+07 0 0.222865 0.99438 0.7458 7.61663e+07 0.00269882 1.65584e+07 7.46958e+06 1.66693e+07 173 1.66416e+07 1.22913e+07 0.00228042 1.67044e+07 50.0941 0.00390564 0.996018 0 50.1668 GTEX-14DAQ-0226-SM-664MQ 0 C1 2 pieces, ~20% fascia/vascular elements, delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 450 627 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991957 166918 0.978298 0.99226 0.799593 23939 1 76 0.00241954 277 0 1.03386e+08 0.0212056 464445 1.04192e+08 6.1129e+06 23975 5.14459e+07 0 0.178705 0.99226 0.793404 1.03386e+08 0.00322484 2.29788e+07 9.25089e+06 2.30752e+07 310 2.29742e+07 1.7982e+07 0.00282206 2.31134e+07 50.1509 0.00445758 0.992564 0 50.1046 GTEX-14DAQ-0326-SM-664MR 0 C1 2 pieces, trace interestitial fat 8.6 Muscle Muscle - Skeletal 0011907 453 624 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993608 198864 0.984373 0.994378 0.877059 20386 1 76 0.00202755 275 0 1.11903e+08 0.0153567 1.04166e+06 1.12535e+08 6.9166e+06 20401 5.5781e+07 0 0.107314 0.994378 0.872129 1.11903e+08 0.00278487 2.43427e+07 1.09786e+07 2.4341e+07 304 2.43033e+07 2.51866e+07 0.00240592 2.44624e+07 50.1631 0.00925628 0.995149 0 49.9982 GTEX-14DAQ-0326-SM-CYKPR 0 C1 2 pieces, trace interestitial fat 8.6 Muscle Muscle - Skeletal 0011907 453 624 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 RIP-Seq GTEX-14DAQ-0426-SM-664MS 0 C1 2 pieces, clean specimens 7.1 Nerve Nerve - Tibial 0001323 454 623 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.99022 201980 0.967093 0.990616 0.73369 25752 1 76 0.00251068 285 0 1.06142e+08 0.0325726 391450 1.07147e+08 6.92179e+06 25811 5.27678e+07 0 0.233403 0.990616 0.726805 1.06142e+08 0.00345963 2.34474e+07 9.46959e+06 2.34665e+07 278 2.33638e+07 1.57638e+07 0.00298496 2.35975e+07 50.2489 0.00365339 0.991012 0 50.0203 GTEX-14DAQ-0526-SM-793AY 0 C1 2 pieces, clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 455 623 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993896 208947 0.973914 0.994344 0.797366 20536 1 76 0.00193724 122 0 5.3708e+07 0.0256751 222892 5.40135e+07 2.47768e+06 20560 2.67396e+07 0 0.176548 0.994344 0.792856 5.3708e+07 0.0023819 1.15895e+07 3.83194e+06 1.1577e+07 128 1.16175e+07 9.80765e+06 0.00215947 1.15726e+07 49.9032 0.0041266 0.994793 0 49.973 GTEX-14DAQ-0626-SM-793DS 0 C1 6 pieces, squamous epithelium is ~40 microns, minimal dermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 464 615 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993041 226721 0.973245 0.994176 0.716679 24226 1 76 0.00303496 149 0 7.8035e+07 0.0265344 537198 7.84922e+07 1.12974e+07 24266 3.88709e+07 0 0.256566 0.994176 0.712505 7.8035e+07 0.00352744 1.72106e+07 7.66659e+06 1.72475e+07 163 1.72778e+07 1.10993e+07 0.00328092 1.72674e+07 49.9849 0.00684397 0.995311 0 50.0535 GTEX-14DAQ-0826-SM-73KWT 1 C1 2 pieces, regressive changes 6.6 Thyroid Thyroid 0002046 490 590 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993045 261683 0.966134 0.994055 0.715957 25305 1 76 0.00278987 166 0 8.51562e+07 0.0335534 232689 8.56655e+07 8.20112e+06 25352 4.24102e+07 0 0.250178 0.994055 0.7117 8.51562e+07 0.00322478 1.86847e+07 8.1606e+06 1.87242e+07 183 1.87754e+07 1.241e+07 0.0030071 1.87158e+07 49.9205 0.00271625 0.995065 0 50.0529 GTEX-14DAQ-0926-SM-793AZ 1 C1 2 pieces, moderate congestion. Well preserved bronchial mucosa present, delineated 7.9 Lung Lung 0008952 492 588 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993625 302931 0.970655 0.994139 0.761664 22765 1 76 0.00209186 119 0 5.39751e+07 0.0289554 157171 5.42933e+07 2.73233e+06 22794 2.68598e+07 0 0.208991 0.994139 0.7572 5.39751e+07 0.00257661 1.19718e+07 4.36695e+06 1.19545e+07 128 1.20359e+07 8.97205e+06 0.00233411 1.19187e+07 49.7553 0.00289485 0.994653 0 49.9639 GTEX-14DAQ-0926-SM-CYKRD 1 C1 2 pieces, moderate congestion. Well preserved bronchial mucosa present, delineated 7.9 Lung Lung 0008952 492 588 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 RIP-Seq GTEX-14DAQ-1026-SM-793B1 1 C1 2 pieces, no abnormalities 7.7 Heart Heart - Atrial Appendage 0006631 493 588 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995051 216981 0.977405 0.995444 0.774385 21660 1 76 0.00194878 115 0 5.64918e+07 0.0220947 1.07797e+06 5.67504e+07 2.70566e+06 21686 2.81255e+07 0 0.20302 0.995444 0.770857 5.64918e+07 0.0023799 1.24321e+07 4.85794e+06 1.24383e+07 134 1.24656e+07 8.96949e+06 0.00216425 1.24225e+07 49.9134 0.018995 0.995837 0 50.0124 GTEX-14DAQ-1126-SM-664MT 1 C1 2 pieces, minimal interstitial fibrosis, chronic ischemic changes 7.2 Heart Heart - Left Ventricle 0006566 495 586 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989805 229473 0.982489 0.990709 0.808333 22697 1 76 0.00240786 372 0 1.35666e+08 0.0174033 6.41991e+06 1.36938e+08 8.74268e+06 22726 6.76027e+07 0 0.174156 0.990709 0.800822 1.35666e+08 0.00322626 2.97298e+07 5.19771e+07 2.97194e+07 357 2.96293e+07 1.35353e+07 0.00281669 2.99188e+07 50.2431 0.0468819 0.991612 0 49.9913 GTEX-14DAQ-1326-SM-5RQIM 1 C1 6 pieces, prominent atherosis up to ~0.8mm 7.2 Blood Vessel Artery - Aorta 0001496 498 584 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991316 180650 0.972535 0.99219 0.769514 22079 1 76 0.00228595 147 0 7.28813e+07 0.027056 191645 7.3455e+07 3.90053e+06 22104 3.625e+07 0 0.203022 0.99219 0.763504 7.28813e+07 0.00302227 1.57268e+07 6.4403e+06 1.5825e+07 160 1.57889e+07 1.26412e+07 0.00265379 1.58312e+07 50.0667 0.00260901 0.993064 0 50.1555 GTEX-14DAQ-1426-SM-5RQJD 1 C1 6 pieces, squamous mucosa up to ~0.4mm, 20-30% thickness 8.5 Esophagus Esophagus - Mucosa 0006920 500 583 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992467 162281 0.972502 0.993252 0.77227 22557 1 76 0.00222007 132 0 6.39378e+07 0.0272383 305083 6.43722e+07 3.12155e+06 22577 3.1856e+07 0 0.200232 0.993252 0.767059 6.39378e+07 0.00288726 1.41936e+07 7.47606e+06 1.43027e+07 144 1.42874e+07 1.07574e+07 0.0025534 1.42622e+07 49.9559 0.00473936 0.994038 0 50.1914 GTEX-14DAQ-1526-SM-5ZZW8 1 C1 6 pieces, all target muscularis 8 Esophagus Esophagus - Muscularis 0004648 501 583 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992749 166786 0.971174 0.994074 0.760463 23343 1 76 0.00221582 163 0 8.20926e+07 0.0285636 527589 8.2582e+07 7.92073e+06 23382 4.08973e+07 0 0.210711 0.994074 0.755956 8.20926e+07 0.00326068 1.76474e+07 6.81615e+06 1.77913e+07 194 1.77558e+07 1.29828e+07 0.00273756 1.77863e+07 50.0428 0.00638867 0.995398 0 50.203 GTEX-14DAQ-1626-SM-5S2R1 1 C1 6 pieces, target muscularis 6.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 502 582 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991685 149247 0.971225 0.993047 0.766249 22639 1 76 0.00191003 131 0 6.36024e+07 0.0284968 296647 6.40477e+07 3.65401e+06 22664 3.16634e+07 0 0.204975 0.993047 0.760921 6.36024e+07 0.00260551 1.3716e+07 5.00924e+06 1.38648e+07 142 1.38292e+07 1.0664e+07 0.00225729 1.38348e+07 50.0101 0.00463165 0.994409 0 50.2697 GTEX-14DAQ-1726-SM-5S2R2 1 C1 2 pieces, no steatosis, minimal congestion 6.1 Liver Liver 0001114 503 581 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992089 130646 0.97254 0.993478 0.816006 20405 1 76 0.00188041 107 0 5.47619e+07 0.0273093 525666 5.51215e+07 3.04163e+06 20423 2.72863e+07 0 0.156534 0.993478 0.810684 5.47619e+07 0.00252527 1.16806e+07 7.50175e+06 1.18712e+07 131 1.18381e+07 9.37521e+06 0.00220239 1.17798e+07 49.8767 0.0095365 0.994866 0 50.4046 GTEX-14DAQ-1826-SM-5S2VV 1 C1 2 pieces, all cortex 6.6 Adrenal Gland Adrenal Gland 0002369 506 579 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990292 332800 0.964855 0.992814 0.773805 23832 1 76 0.00216399 199 0 7.68254e+07 0.0349235 1.62046e+06 7.73815e+07 8.30259e+06 23863 3.82345e+07 0 0.19105 0.992814 0.768245 7.68254e+07 0.0033627 1.67556e+07 1.34167e+07 1.69076e+07 216 1.69122e+07 9.247e+06 0.00276182 1.69426e+07 50.045 0.0209412 0.995336 0 50.2259 GTEX-14DAQ-2226-SM-5YYAD 1 C1 2 pieces, typical post-menopausal involutional changes 6.9 Ovary Ovary 0000992 513 575 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989275 315523 0.966153 0.990478 0.68426 26364 1 76 0.00277226 380 0 1.31136e+08 0.0335836 202067 1.32397e+08 5.74663e+06 26445 6.51887e+07 0 0.281893 0.990478 0.677744 1.31136e+08 0.0035273 2.88435e+07 1.26474e+07 2.88576e+07 333 2.88635e+07 2.06322e+07 0.00314932 2.90027e+07 50.1203 0.00152623 0.99168 0 50.0123 GTEX-14DAQ-2326-SM-5S2QX 2 C1 6 pieces, atrophic squamous mucosa, partially sloughing, ~15-30 microns 6.4 Vagina Vagina 0000996 516 573 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991414 135679 0.965546 0.99233 0.700917 23946 1 76 0.00202697 123 0 5.65464e+07 0.0341275 122657 5.69835e+07 3.18288e+06 23978 2.81334e+07 0 0.264629 0.99233 0.695541 5.65464e+07 0.00285752 1.23772e+07 5.44578e+06 1.25146e+07 128 1.24586e+07 8.12031e+06 0.00244186 1.24886e+07 50.0601 0.0021525 0.993246 0 50.2761 GTEX-14DAQ-2526-SM-5RQIO 1 C1 2 pieces, fascia is ~30% of tissue, rpe delineated. 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 520 571 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992153 174915 0.974685 0.993043 0.753204 23436 1 76 0.00230027 137 0 6.50692e+07 0.0249493 471577 6.55251e+07 3.22674e+06 23464 3.23841e+07 0 0.221481 0.993043 0.747964 6.50692e+07 0.00306591 1.43975e+07 6.47313e+06 1.4548e+07 146 1.45478e+07 1.02296e+07 0.00268275 1.44577e+07 49.8447 0.00719689 0.993933 0 50.2599 GTEX-14DAQ-2726-SM-5S2QY 3 C1 6 pieces, mucosa ~0.25mm, generally advanced autolysis 6.2 Colon Colon - Transverse 0001157 529 563 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.991675 410623 0.97038 0.993058 0.796194 23762 1 76 0.00179555 169 0 7.98641e+07 0.0292507 443057 8.04224e+07 4.00688e+06 23788 3.97337e+07 0 0.174186 0.993058 0.790666 7.98641e+07 0.00255998 1.72317e+07 6.35285e+06 1.74038e+07 196 1.73461e+07 1.3251e+07 0.00217723 1.73989e+07 50.076 0.00550912 0.99444 0 50.2485 GTEX-14DAQ-2826-SM-664MU 2 C1 6 pieces, mucosa up to ~1mm; some areas better preserved (score 1), ~20-30% thickness 5.7 Stomach Stomach 0000945 530 562 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.972257 142161 0.981134 0.973131 0.854424 22637 1 76 0.00230553 414 0 9.00956e+07 0.018335 892318 9.25832e+07 6.03829e+06 22653 4.48158e+07 0 0.12671 0.973131 0.831466 9.00956e+07 0.0033682 2.0731e+07 1.35848e+08 2.12416e+07 304 2.11635e+07 2.52924e+07 0.00283639 2.08916e+07 49.6767 0.00963802 0.974005 0 50.6082 GTEX-14DAQ-2926-SM-664MV 1 C1 6 pieces, target muscularis 6.8 Colon Colon - Sigmoid 0001159 533 560 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989941 141853 0.96984 0.990042 0.789503 23906 1 76 0.00242052 194 0 8.29374e+07 0.029932 651110 8.37715e+07 5.64028e+06 23930 4.1217e+07 0 0.180337 0.990042 0.781641 8.29374e+07 0.00345534 1.80125e+07 7.02816e+06 1.80408e+07 206 1.79338e+07 1.26231e+07 0.00293788 1.81351e+07 50.279 0.00777245 0.990144 0 50.0392 GTEX-14DAQ-3026-SM-5S2QZ 1 C1 4 pieces, no abnormalities 7 Brain Brain - Cerebellum 0002037 547 546 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990942 502844 0.92931 0.992649 0.698679 22636 1 76 0.00200406 109 0 5.31013e+07 0.0702877 511115 5.34945e+07 3.30297e+06 22658 2.64076e+07 0 0.230631 0.992649 0.693543 5.31013e+07 0.00286527 1.12123e+07 1.84039e+07 1.14061e+07 121 1.14022e+07 6.66585e+06 0.00243392 1.13132e+07 49.804 0.00955453 0.994355 0 50.4285 GTEX-14DAQ-3126-SM-62LDS 1 C1 4 pieces, no abnormalities 7.3 Brain Brain - Cortex 0001870 549 545 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988889 320887 0.967072 0.992307 0.838832 24159 1 76 0.00274832 269 0 9.32551e+07 0.0325133 2.90476e+06 9.39781e+07 6.44145e+06 24181 4.63741e+07 0 0.12824 0.992307 0.832379 9.32551e+07 0.00317928 2.04495e+07 1.58291e+07 2.05981e+07 278 2.0557e+07 1.22176e+07 0.00296306 2.07671e+07 50.2542 0.0309089 0.995724 0 50.181 GTEX-14DAQ-3226-SM-664OI 1 C1 1 piece, adenohypophysis 7.9 Pituitary Pituitary 0000007 549 545 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992672 381731 0.959827 0.993359 0.762601 26472 1 76 0.00231879 276 0 1.29147e+08 0.0398691 420769 1.3001e+08 8.07594e+06 26532 6.43389e+07 0 0.197226 0.993359 0.757536 1.29147e+08 0.00297374 2.68624e+07 2.02987e+07 2.70231e+07 315 2.70016e+07 2.29544e+07 0.00264604 2.69722e+07 49.9728 0.00323644 0.994047 0 50.149 GTEX-14DAR-0004-SM-5CV9S B1 Blood Whole Blood 0013756 -167 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14DAR-0004-SM-7DROF B1 Blood Whole Blood 0013756 -167 BP-46711 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14DAR-0006-SM-5N9GC B1 8.9 Blood Whole Blood 0013756 -167 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.981521 789700 0.962056 0.982898 0.797129 19828 1 76 0.00416208 198 0 1.06801e+08 0.0375397 203743 1.0866e+08 5.02123e+06 19845 5.31091e+07 0 0.164928 0.982898 0.783496 1.06801e+08 0.0040746 2.38237e+07 9.00948e+07 2.40966e+07 242 2.40947e+07 2.36618e+07 0.0041184 2.39708e+07 49.871 0.00187506 0.984274 0 50.2847 GTEX-14DAR-0226-SM-5S2PR 1 B1 2 pieces, focal early pneumonitis, delineated, diffuse atalectasis, bronchial mucosa fairly prominent, rep foci encircled 8.2 Lung Lung 0008952 105 764 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993064 129594 0.976963 0.994157 0.833805 23114 1 76 0.00177801 211 0 8.22815e+07 0.0227275 312016 8.27651e+07 4.71143e+06 23134 4.10114e+07 0 0.143158 0.994157 0.828933 8.22815e+07 0.0024402 1.82839e+07 6.89784e+06 1.85304e+07 236 1.84872e+07 1.61725e+07 0.00210874 1.8412e+07 49.8981 0.0037699 0.995249 0 50.3348 GTEX-14DAR-0326-SM-5S2PS 1 B1 2 pieces, no abnormalities 7.1 Spleen Spleen 0002106 112 757 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991858 130016 0.964899 0.993031 0.795714 23196 1 76 0.00235588 139 0 6.80355e+07 0.0332516 322314 6.8513e+07 4.1107e+06 23219 3.38342e+07 0 0.169185 0.993031 0.790168 6.80355e+07 0.00305979 1.49629e+07 1.08571e+07 1.51236e+07 162 1.50762e+07 1.07635e+07 0.00270742 1.50897e+07 50.0223 0.00470442 0.994205 0 50.2672 GTEX-14DAR-0426-SM-664MW 1 B1 2 pieces, ~5% fasca, delineated. Minute focus of mesothelial hyerplasia, ensquared 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 113 756 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990722 138787 0.976189 0.991716 0.828826 23032 1 76 0.00220396 204 0 8.25658e+07 0.0235674 448616 8.32555e+07 5.51821e+06 23054 4.10738e+07 0 0.147363 0.991716 0.82196 8.25658e+07 0.0034316 1.82146e+07 7.01793e+06 1.83189e+07 211 1.82505e+07 1.469e+07 0.00281717 1.83677e+07 50.16 0.00538843 0.99271 0 50.1427 GTEX-14DAR-0526-SM-664MX 1 B1 2 pieces, exceptionally well-preserved, Islets abundant, well visualized, rep encircled 7.2 Pancreas Pancreas 0001150 116 753 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991939 180164 0.980734 0.992957 0.850504 21724 1 76 0.00241538 131 0 8.80604e+07 0.0189279 248086 8.8685e+07 5.40779e+06 21744 4.38665e+07 0 0.130229 0.992957 0.844514 8.80604e+07 0.0033598 2.03248e+07 2.50991e+07 2.05775e+07 147 2.0499e+07 2.53603e+07 0.0028871 2.0492e+07 49.9914 0.00279738 0.993975 0 50.3089 GTEX-14DAR-0626-SM-664MY 1 B1 7 pieces, all taraget muscularis 8.6 Esophagus Esophagus - Muscularis 0004648 120 749 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992263 118500 0.976099 0.992776 0.877301 21384 1 76 0.00213938 206 0 8.02684e+07 0.0237175 762185 8.08525e+07 5.2866e+06 21394 3.99754e+07 0 0.0987975 0.992776 0.870964 8.02684e+07 0.00298529 1.71582e+07 6.97391e+06 1.73018e+07 247 1.71215e+07 1.38353e+07 0.00256211 1.73794e+07 50.3737 0.00942686 0.99329 0 50.2083 GTEX-14DAR-0726-SM-5RQIA 1 B1 6 pieces, all target muscularis; trace adherent fat/serosa, delineated 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 122 747 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992067 127877 0.975814 0.993169 0.830193 21870 1 76 0.00202494 208 0 8.0556e+07 0.0239395 756346 8.11101e+07 4.23075e+06 21889 4.01375e+07 0 0.145621 0.993169 0.824521 8.0556e+07 0.002718 1.74082e+07 7.85074e+06 1.75305e+07 245 1.74506e+07 1.32354e+07 0.00237108 1.75723e+07 50.1737 0.00932493 0.994271 0 50.175 GTEX-14DAR-0826-SM-73KYJ 1 B1 6 pieces, well preserved; squamous mcuosa is ~0.3mm, 20-30% thickness. Submucosal mucus glands present, rep delineated 9.8 Esophagus Esophagus - Mucosa 0006920 123 746 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994433 233866 0.979524 0.995376 0.854473 20999 1 76 0.0026301 173 0 7.43719e+07 0.0202007 477871 7.47174e+07 7.27241e+06 21014 3.70846e+07 0 0.125051 0.995376 0.850523 7.43719e+07 0.00297799 1.67583e+07 1.08036e+07 1.68348e+07 174 1.68641e+07 1.5869e+07 0.00280388 1.6797e+07 49.9004 0.00639572 0.99632 0 50.1138 GTEX-14DAR-0926-SM-73KUQ 1 B1 6 pieces, generally well preserved mucosa up to ~1mm, 60-90% thickness. Several delineated foci of moderate-advance autolysis, delineated 7 Stomach Stomach 0000945 126 743 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.976171 149369 0.986051 0.97706 0.876479 22537 1 76 0.0039661 450 0 1.15222e+08 0.0136397 889114 1.17927e+08 5.54548e+06 22555 5.74087e+07 0 0.109572 0.97706 0.856372 1.15222e+08 0.00370865 2.66742e+07 1.58148e+08 2.7325e+07 332 2.73525e+07 3.57634e+07 0.00383749 2.6747e+07 49.4405 0.00753951 0.977949 0 50.6026 GTEX-14DAR-1026-SM-73KV3 0 B1 2 pieces, no abnormality; one section largely glandular stroma 8.7 Prostate Prostate 0002367 128 741 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992239 324940 0.977012 0.993365 0.85152 24037 1 76 0.00393725 212 0 9.8998e+07 0.0225729 544666 9.96592e+07 4.71628e+06 24061 4.929e+07 0 0.125492 0.993365 0.84587 9.8998e+07 0.00403503 2.15962e+07 7.73015e+06 2.18082e+07 248 2.18171e+07 1.9902e+07 0.00398608 2.1693e+07 49.8574 0.00546529 0.994491 0 50.2441 GTEX-14DAR-1126-SM-793AT 0 B1 2 pieces, well preserved; spermatogenesis is present 7.4 Testis Testis 0000473 134 735 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994339 226686 0.927332 0.994844 0.72944 31739 1 76 0.0018015 127 0 6.55064e+07 0.0723078 589273 6.58459e+07 2.67563e+06 31793 3.26608e+07 0 0.197892 0.994844 0.725679 6.55064e+07 0.00209442 1.36712e+07 8.36851e+06 1.36689e+07 133 1.37051e+07 1.14171e+07 0.00194789 1.36604e+07 49.9184 0.00894927 0.99535 0 49.9958 GTEX-14DAR-1226-SM-73KYV 0 B1 8 pieces, focal adherent dermal fat, delineated; squamous epithelium is ~70-80 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 135 734 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992816 163433 0.973584 0.993883 0.832469 23303 1 76 0.00259952 192 0 7.68144e+07 0.0262406 523890 7.72872e+07 8.27592e+06 23325 3.82658e+07 0 0.141115 0.993883 0.827376 7.68144e+07 0.00311247 1.6862e+07 8.15927e+06 1.69454e+07 202 1.69218e+07 1.30612e+07 0.00285572 1.69725e+07 50.0748 0.00677848 0.99495 0 50.1233 GTEX-14DAR-1326-SM-7DUEG 1 B1 2 pieces, fibroadipose elements only; no ductal elements noted 7.9 Breast Breast - Mammary Tissue 0008367 137 732 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993133 190472 0.97396 0.993805 0.810863 23156 1 76 0.00265187 173 0 8.20504e+07 0.0257561 387125 8.25619e+07 7.26281e+06 23181 4.08695e+07 0 0.163098 0.993805 0.80584 8.20504e+07 0.00412894 1.79969e+07 7.55408e+06 1.81358e+07 200 1.81548e+07 1.40335e+07 0.0033899 1.80373e+07 49.8376 0.00468891 0.994477 0 50.1921 GTEX-14DAR-1426-SM-5RQIR 1 B1 6 pieces, well preserved; lymphoid aggregates delineated, ~20% tissue 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 145 724 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991334 185505 0.974397 0.992497 0.813747 22349 1 76 0.00226089 174 0 7.06092e+07 0.0252699 637126 7.1143e+07 3.81783e+06 22371 3.51735e+07 0 0.16065 0.992497 0.807641 7.06092e+07 0.00302779 1.5648e+07 9.99537e+06 1.59226e+07 178 1.58403e+07 1.12706e+07 0.00264389 1.5805e+07 49.9442 0.00895557 0.99366 0 50.4349 GTEX-14DAR-1526-SM-5RQIX 1 B1 7 pieces, mucosa well preserved, ~0.3mm 7.4 Colon Colon - Transverse 0001157 148 721 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991453 168511 0.974712 0.99251 0.812523 22010 1 76 0.0022416 160 0 6.45472e+07 0.0248677 1.26231e+06 6.50344e+07 3.3416e+06 22033 3.21348e+07 0 0.162189 0.99251 0.806438 6.45472e+07 0.00309765 1.43306e+07 8.88543e+06 1.4481e+07 171 1.43851e+07 8.35442e+06 0.00266917 1.44872e+07 50.1767 0.0194098 0.993567 0 50.2609 GTEX-14DAR-1726-SM-664MZ 1 B1 2 pieces, all cortex, well preserved, ~10% delineated adherent fat 8.1 Adrenal Gland Adrenal Gland 0002369 154 715 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993037 212188 0.978 0.993806 0.834657 22496 1 76 0.00235923 269 0 9.4618e+07 0.021753 2.22678e+06 9.52077e+07 5.73751e+06 22517 4.71485e+07 0 0.143343 0.993806 0.829487 9.4618e+07 0.00316457 2.07625e+07 2.04387e+07 2.08824e+07 294 2.06808e+07 1.21667e+07 0.00276159 2.10178e+07 50.4041 0.0233886 0.994575 0 50.1439 GTEX-14DAR-1826-SM-664N1 0 B1 2 pieces, ~10% interstitial fat; rep delineated 7.6 Muscle Muscle - Skeletal 0011907 248 621 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992154 150625 0.983737 0.992871 0.880026 19400 1 76 0.00219059 274 0 8.67779e+07 0.0160736 1.2103e+06 8.74009e+07 5.50224e+06 19411 4.32298e+07 0 0.103711 0.992871 0.873753 8.67779e+07 0.00307055 1.91009e+07 9.87072e+06 1.93789e+07 270 1.92419e+07 1.55117e+07 0.00263025 1.92871e+07 50.0587 0.0138476 0.993589 0 50.3612 GTEX-14DAR-1926-SM-5S2NQ 0 B1 2 pieces, ~10% fascia/vascular tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 250 619 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993659 258389 0.974534 0.994824 0.803227 21901 1 76 0.00172934 157 0 6.90946e+07 0.0251832 322351 6.94541e+07 5.0356e+06 21922 3.44013e+07 0 0.171307 0.994824 0.79907 6.90946e+07 0.00254601 1.51271e+07 6.48602e+06 1.52277e+07 169 1.51484e+07 1.17258e+07 0.0021372 1.52881e+07 50.2294 0.00464121 0.995989 0 50.1657 GTEX-14DAR-2026-SM-5S2O3 0 B1 6 pieces, squamous epithelium is ~40 microns, few foci of adherent dermal fat, delineated 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 250 619 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990816 212099 0.972494 0.993183 0.813201 22335 1 76 0.00181509 160 0 5.88814e+07 0.0272951 377989 5.92855e+07 4.17878e+06 22353 2.92779e+07 0 0.159293 0.993183 0.807657 5.88814e+07 0.00277381 1.28186e+07 5.84655e+06 1.29313e+07 148 1.28928e+07 1.007e+07 0.00229331 1.29952e+07 50.1978 0.00637574 0.995551 0 50.2189 GTEX-14DAR-2126-SM-5RQID 0 B1 3 pieces, no atherosis, clean specimens 8.1 Blood Vessel Artery - Tibial 0007610 253 616 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.986933 170580 0.976917 0.988206 0.851777 20506 1 76 0.00194688 168 0 7.37412e+07 0.022622 237116 7.46213e+07 3.9657e+06 20520 3.67064e+07 0 0.125139 0.988206 0.841732 7.37412e+07 0.00283838 1.58121e+07 4.54721e+06 1.59744e+07 175 1.59442e+07 1.51526e+07 0.00239206 1.59347e+07 49.985 0.00317759 0.989479 0 50.2552 GTEX-14DAR-2226-SM-5S2VT 0 B1 2 pieces, clean specimens 6 Nerve Nerve - Tibial 0001323 257 612 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.989082 191451 0.974959 0.991992 0.837931 22765 1 76 0.00180955 182 0 7.97578e+07 0.0247773 414986 8.04017e+07 8.6799e+06 22790 3.96453e+07 0 0.137027 0.991992 0.831221 7.97578e+07 0.00303938 1.7494e+07 8.04232e+06 1.76915e+07 202 1.76188e+07 1.55591e+07 0.00242266 1.77975e+07 50.2522 0.00516141 0.994902 0 50.2807 GTEX-14DAR-5016-SM-AN42E B1 Muscle Muscle - Skeletal 0011907 259 ChIP-Seq GTEX-14E1K-0003-SM-5CV9F B1 Blood Whole Blood 0013756 -91 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14E1K-0003-SM-7DROG B1 Blood Whole Blood 0013756 -91 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14E1K-0006-SM-5N9DY B1 8.7 Blood Whole Blood 0013756 -91 BP-46725 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.986333 857750 0.96415 0.988177 0.804175 20080 1 76 0.00456314 207 0 1.11744e+08 0.0352356 335816 1.13081e+08 5.82591e+06 20094 5.55082e+07 0 0.159975 0.988177 0.794667 1.11744e+08 0.00493625 2.47806e+07 6.51495e+07 2.5048e+07 228 2.50765e+07 2.36111e+07 0.00474934 2.49676e+07 49.8912 0.00296968 0.990021 0 50.2683 GTEX-14E1K-0126-SM-664NL 1 B1 2 pieces, no abnormalities 7.2 Spleen Spleen 0002106 148 588 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.99111 263354 0.961451 0.99176 0.727904 24944 1 76 0.00283541 207 0 9.33295e+07 0.0378364 465118 9.41048e+07 5.41745e+06 24991 4.64503e+07 0 0.233547 0.99176 0.721907 9.33295e+07 0.00360164 2.05296e+07 1.25451e+07 2.06265e+07 227 2.06015e+07 1.39533e+07 0.00321828 2.06185e+07 50.0206 0.00494255 0.992411 0 50.1176 GTEX-14E1K-0226-SM-62LDT 1 B1 2 pieces, mild congestion 7.6 Lung Lung 0008952 166 570 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.98908 165014 0.972345 0.992164 0.787871 23888 1 76 0.00304636 208 0 8.53085e+07 0.0272065 390824 8.59822e+07 5.76348e+06 23917 4.2427e+07 0 0.184474 0.992164 0.781697 8.53085e+07 0.00346325 1.88993e+07 7.38314e+06 1.90185e+07 208 1.90498e+07 1.4776e+07 0.00325416 1.91091e+07 50.0777 0.00454541 0.995249 0 50.1572 GTEX-14E1K-0326-SM-5S2PE 1 B1 2 pieces, no steatosis 6.8 Liver Liver 0001114 172 564 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994423 128794 0.979423 0.995505 0.84041 19220 1 76 0.00179914 109 0 6.16683e+07 0.0199384 730291 6.19468e+07 3.47777e+06 19228 3.07253e+07 0 0.139013 0.995505 0.836633 6.16683e+07 0.00240053 1.3331e+07 8.81251e+06 1.34588e+07 138 1.34066e+07 1.31191e+07 0.00209951 1.34452e+07 50.0718 0.011789 0.996587 0 50.2385 GTEX-14E1K-0426-SM-5S2PF 1 B1 2 pieces, ~20-30% fascia/vascular elements, rep delineated 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 174 562 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993787 118482 0.97774 0.994792 0.851888 21610 1 76 0.00186233 141 0 6.22321e+07 0.0220166 1.01375e+06 6.25579e+07 3.45697e+06 21622 3.10099e+07 0 0.125852 0.994792 0.847451 6.22321e+07 0.00261626 1.36851e+07 5.99003e+06 1.39153e+07 160 1.38116e+07 1.08589e+07 0.00223891 1.3852e+07 50.0731 0.0162049 0.995797 0 50.417 GTEX-14E1K-0626-SM-5S2PG 1 B1 2 pieces, prominent medulla, well preserved, delineated--valuable and rare specimen. ~10% adherent fat, rep ensquared 7 Adrenal Gland Adrenal Gland 0002369 177 559 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993954 181052 0.976422 0.995042 0.836696 21937 1 76 0.00198474 157 0 7.53952e+07 0.0233043 1.54751e+06 7.57709e+07 4.29016e+06 21953 3.75764e+07 0 0.139725 0.995042 0.832548 7.53952e+07 0.00269562 1.65237e+07 8.73198e+06 1.67139e+07 202 1.66737e+07 1.29586e+07 0.00233979 1.66314e+07 49.9365 0.0204235 0.99613 0 50.2861 GTEX-14E1K-0726-SM-62LDU 1 B1 6 pieces, no atherosis 6.7 Blood Vessel Artery - Aorta 0001496 180 556 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987374 150255 0.976926 0.991241 0.842307 21135 1 76 0.00281522 143 0 7.28156e+07 0.0226026 246860 7.3459e+07 5.29323e+06 21150 3.61785e+07 0 0.134619 0.991241 0.834929 7.28156e+07 0.00353676 1.57028e+07 5.34656e+06 1.5824e+07 164 1.58534e+07 1.42414e+07 0.00317458 1.59309e+07 50.122 0.00336051 0.995108 0 50.1923 GTEX-14E1K-0826-SM-5ZZW9 1 B1 2 pieces, no abnormalities 8.5 Heart Heart - Atrial Appendage 0006631 182 554 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994434 138662 0.980792 0.995422 0.849348 21482 1 76 0.00224556 198 0 8.13646e+07 0.0188717 1.8383e+06 8.17388e+07 6.62717e+06 21497 4.0577e+07 0 0.131444 0.995422 0.845459 8.13646e+07 0.00312148 1.78107e+07 1.25974e+07 1.79553e+07 254 1.77483e+07 1.34039e+07 0.00268309 1.80815e+07 50.465 0.0224899 0.99641 0 50.2022 GTEX-14E1K-0926-SM-5S2U4 1 B1 pieces 6.3 Blood Vessel Artery - Coronary 0001621 189 547 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991737 227811 0.973968 0.993668 0.811216 23538 1 76 0.00210036 209 0 8.69947e+07 0.0257221 988391 8.75491e+07 8.26954e+06 23564 4.33145e+07 0 0.162752 0.993668 0.80608 8.69947e+07 0.00321582 1.91181e+07 8.71984e+06 1.92499e+07 223 1.91967e+07 1.46292e+07 0.002657 1.93366e+07 50.1815 0.0112896 0.9956 0 50.1718 GTEX-14E1K-1026-SM-73KUR 1 B1 2 pieces, minimal chronic ischemic change/interstitial fibrosis 8.1 Heart Heart - Left Ventricle 0006566 191 545 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993865 193699 0.985132 0.994407 0.85261 22152 1 76 0.00424324 269 0 1.11216e+08 0.0145194 2.81724e+06 1.11841e+08 5.0654e+06 22168 5.54556e+07 0 0.132522 0.994407 0.847842 1.11216e+08 0.00367013 2.43416e+07 2.36117e+07 2.46825e+07 280 2.45471e+07 1.92682e+07 0.00395684 2.45265e+07 49.979 0.0251896 0.99495 0 50.3477 GTEX-14E1K-1126-SM-73KV4 1 B1 6 pieces, all target muscularis; incidental mucus gland noted, delineated 8.8 Esophagus Esophagus - Muscularis 0004648 199 537 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992437 318192 0.977723 0.993552 0.839518 22011 1 76 0.00404471 179 0 8.17293e+07 0.0219078 701624 8.22597e+07 3.53384e+06 22031 4.0693e+07 0 0.138205 0.993552 0.834105 8.17293e+07 0.0041032 1.75079e+07 5.90621e+06 1.78175e+07 184 1.78106e+07 1.506e+07 0.00407392 1.75966e+07 49.6978 0.00852938 0.994667 0 50.4383 GTEX-14E1K-1226-SM-5S2PD 1 B1 6 pieces, Squamous mucosa up to ~0.4mm, ~15% thickness; numerous submucosal mucus glands, rep delineated 7.5 Esophagus Esophagus - Mucosa 0006920 201 535 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993425 121039 0.978626 0.994372 0.820833 21339 1 76 0.00196242 140 0 6.79096e+07 0.0210597 394913 6.8294e+07 3.68208e+06 21351 3.38546e+07 0 0.157793 0.994372 0.816214 6.79096e+07 0.00262862 1.53209e+07 1.02934e+07 1.54853e+07 158 1.54508e+07 1.29431e+07 0.00229521 1.54188e+07 49.948 0.00578254 0.995319 0 50.2669 GTEX-14E1K-1426-SM-5YY8V 1 B1 6 pieces, all target muscularis 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 210 526 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.993462 183553 0.977567 0.994435 0.851844 23006 1 76 0.00262187 382 0 1.22606e+08 0.0221399 1.60962e+06 1.23292e+08 5.22713e+06 23025 6.10785e+07 0 0.125722 0.994435 0.847104 1.22606e+08 0.00317903 2.65575e+07 1.0947e+07 2.6846e+07 343 2.66404e+07 2.15709e+07 0.00290018 2.68769e+07 50.221 0.0130554 0.995407 0 50.2702 GTEX-14E1K-1526-SM-664MN 3 B1 6 pieces, mucosa completely sloughed 7.8 Stomach Stomach 0000945 212 524 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991529 142880 0.98036 0.991815 0.881196 21833 1 76 0.00237685 214 0 8.50808e+07 0.0192805 712503 8.57829e+07 5.41824e+06 21843 4.23203e+07 0 0.0991649 0.991815 0.873983 8.50808e+07 0.00336122 1.85168e+07 6.69564e+06 1.8593e+07 220 1.84573e+07 1.73295e+07 0.00286889 1.86817e+07 50.3022 0.00830589 0.992101 0 50.1028 GTEX-14E1K-1626-SM-664MO 1 B1 6 pieces, all target muscularis 6.7 Colon Colon - Sigmoid 0001159 213 523 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.983803 136494 0.977216 0.983044 0.85553 22257 1 76 0.00231369 205 0 8.77736e+07 0.0224603 1.1704e+06 8.92875e+07 7.19572e+06 22268 4.34653e+07 0 0.121686 0.983044 0.841024 8.77736e+07 0.00329806 1.91406e+07 8.33458e+06 1.93321e+07 223 1.90159e+07 1.69254e+07 0.00280625 1.93977e+07 50.4969 0.0131082 0.982286 0 50.2489 GTEX-14E1K-1826-SM-793DT 3 B1 6 pieces, mucosa sloughed 7.1 Colon Colon - Transverse 0001157 232 504 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994499 214888 0.978928 0.995666 0.862914 22067 1 76 0.00288419 199 0 8.1367e+07 0.020776 735024 8.17212e+07 1.13304e+07 22080 4.05504e+07 0 0.116014 0.995666 0.859175 8.1367e+07 0.00353175 1.78157e+07 6.67451e+06 1.78669e+07 204 1.78462e+07 1.55293e+07 0.00320759 1.79318e+07 50.1196 0.00899429 0.996834 0 50.0718 GTEX-14E1K-1926-SM-73KWS 1 B1 2 pieces, spermatogenesis is present 6.5 Testis Testis 0000473 234 502 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992451 329726 0.927213 0.993394 0.719144 33060 1 76 0.00275517 171 0 8.57993e+07 0.0724639 794635 8.63699e+07 8.27745e+06 33125 4.27481e+07 0 0.208068 0.993394 0.714393 8.57993e+07 0.00321365 1.79092e+07 1.21952e+07 1.78971e+07 170 1.79578e+07 1.38216e+07 0.00298419 1.79252e+07 49.9547 0.00920037 0.994336 0 49.9832 GTEX-14E1K-2026-SM-7DUEI 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50-60microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 235 501 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990934 126379 0.977599 0.991679 0.85622 23815 1 76 0.00282658 231 0 8.96254e+07 0.022172 802012 9.03774e+07 8.31965e+06 23833 4.46416e+07 0 0.121379 0.991679 0.849096 8.96254e+07 0.00429384 1.97131e+07 9.6556e+06 1.9856e+07 241 1.98567e+07 1.70989e+07 0.00355966 1.97841e+07 49.9084 0.00887403 0.992425 0 50.1807 GTEX-14E1K-2126-SM-793DU 0 B1 2 pieces, ~60% fascia, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 241 495 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993568 143387 0.983865 0.994815 0.884093 21218 1 76 0.00279378 166 0 7.25472e+07 0.0158323 397428 7.29254e+07 1.0359e+07 21229 3.61596e+07 0 0.0997723 0.994815 0.879509 7.25472e+07 0.00352012 1.59116e+07 7.4464e+06 1.60354e+07 170 1.59868e+07 1.68843e+07 0.0031565 1.60566e+07 50.1089 0.00544979 0.996061 0 50.1938 GTEX-14E1K-2326-SM-664MP 0 B1 2 pieces, ~10% interstitial fat/fascia, rep delineated 7.8 Muscle Muscle - Skeletal 0011907 246 490 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.9937 169071 0.985664 0.994357 0.886968 19561 1 76 0.00227629 278 0 1.08204e+08 0.0141297 2.65694e+06 1.08818e+08 6.22215e+06 19567 5.39454e+07 0 0.0986956 0.994357 0.881963 1.08204e+08 0.0029452 2.3925e+07 1.34441e+07 2.40365e+07 320 2.39353e+07 2.18526e+07 0.00261052 2.40787e+07 50.1493 0.0244163 0.995014 0 50.1162 GTEX-14E1K-2526-SM-5ZZWA 0 B1 2 pieces, clean specimens, Monckeberg medial sclerosis, focus delineated 8.2 Blood Vessel Artery - Tibial 0007610 249 487 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992714 144076 0.97617 0.994278 0.831175 20331 1 76 0.00211826 166 0 7.57586e+07 0.0233637 291848 7.61946e+07 7.27843e+06 20339 3.77357e+07 0 0.144994 0.994278 0.82642 7.57586e+07 0.00335075 1.61509e+07 5.09588e+06 1.6289e+07 173 1.62492e+07 1.51276e+07 0.00273354 1.63027e+07 50.0821 0.0038303 0.995842 0 50.2129 GTEX-14E1K-2626-SM-664OJ 1 B1 2 pieces, ~85-90% glandular elements, delineated, good specimens 7.7 Salivary Gland Minor Salivary Gland 0006330 251 485 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990427 211859 0.977665 0.991277 0.813667 24100 1 76 0.00287173 279 0 1.02309e+08 0.0212145 613290 1.03209e+08 6.84151e+06 24123 5.08901e+07 0 0.163998 0.991277 0.806569 1.02309e+08 0.00369283 2.31968e+07 1.79316e+07 2.33295e+07 300 2.32667e+07 1.73574e+07 0.00328193 2.33435e+07 50.0824 0.00594219 0.992126 0 50.1427 GTEX-14E1K-5004-SM-AN425 B1 Heart Heart - Left Ventricle 0006566 249 ChIP-Seq GTEX-14E1K-5019-SM-AN426 B1 Muscle Muscle - Skeletal 0011907 249 ChIP-Seq GTEX-14E6C-0002-SM-5CV9B C1 Blood Whole Blood 0013756 857 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14E6C-0002-SM-7DROW C1 Blood Whole Blood 0013756 857 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14E6C-0005-SM-5O98N C1 7.9 Blood Whole Blood 0013756 857 BP-46767 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2013 LCSET-4909 03/20/2014 TruSeq.v1 RNASEQ 0.982789 485442 0.972639 0.988706 0.737549 19755 1 76 0.0023618 120 0 6.90162e+07 0.0269363 185458 6.98045e+07 1.01336e+07 19781 3.41945e+07 0 0.235091 0.988706 0.729219 6.90162e+07 0.00444156 1.54245e+07 3.55963e+07 1.55886e+07 129 1.57162e+07 1.31603e+07 0.00339545 1.57098e+07 49.9897 0.00265682 0.994624 0 50.2646 GTEX-14E6C-0011-R10a-SM-AHZMW C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 867 ChIP-Seq GTEX-14E6C-0011-R9a-SM-6EU33 C1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 867 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990888 604123 0.945489 0.992461 0.806099 21321 1 76 0.00412814 167 0 6.18903e+07 0.0542538 1.6432e+06 6.23604e+07 6.23429e+06 21337 3.0808e+07 0 0.13939 0.992461 0.800023 6.18903e+07 0.00426233 1.35444e+07 1.63857e+07 1.36885e+07 155 1.34994e+07 7.77511e+06 0.00419513 1.38284e+07 50.6018 0.02635 0.994034 0 50.2646 GTEX-14E6C-0126-SM-5RQIP 1 C1 6 pieces; well trimmed; 5% dermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 981 410 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991895 159250 0.98351 0.993054 0.811859 21241 1 76 0.00205562 155 0 6.77194e+07 0.0162767 742363 6.81931e+07 3.61566e+06 21257 3.37136e+07 0 0.171651 0.993054 0.80622 6.77194e+07 0.00290648 1.50898e+07 7.68368e+06 1.52018e+07 164 1.51923e+07 1.22124e+07 0.00248055 1.51845e+07 49.9872 0.0108862 0.994213 0 50.1848 GTEX-14E6C-0226-SM-5S2N3 1 C1 2 pieces; 5% fibrous content 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 983 408 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991915 209411 0.982354 0.993808 0.769058 20953 1 76 0.00178072 147 0 7.15633e+07 0.0173598 652840 7.20092e+07 5.40452e+06 20979 3.56134e+07 0 0.213295 0.993808 0.764297 7.15633e+07 0.00258861 1.58894e+07 6.68887e+06 1.60047e+07 163 1.59909e+07 1.25481e+07 0.0021839 1.60412e+07 50.0785 0.00906606 0.995702 0 50.1807 GTEX-14E6C-0326-SM-5Q5EE 1 C1 2 pieces; no fat 7.2 Heart Heart - Atrial Appendage 0006631 986 406 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4953 03/27/2014 TruSeq.v1 RNASEQ 0.990748 164154 0.981467 0.993201 0.824508 21190 1 76 0.00231485 195 0 7.69021e+07 0.0184086 1.72573e+06 7.74285e+07 1.01527e+07 21208 3.8276e+07 0 0.156959 0.993201 0.818902 7.69021e+07 0.00389352 1.68316e+07 1.50417e+07 1.69475e+07 246 1.68179e+07 8.7454e+06 0.00310224 1.71214e+07 50.447 0.022288 0.995654 0 50.1716 GTEX-14E6C-0426-SM-5YYA8 1 C1 2 pieces 7.1 Heart Heart - Left Ventricle 0006566 988 404 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992893 176145 0.981296 0.994025 0.838065 21101 1 76 0.00267543 266 0 9.17178e+07 0.0185791 2.04534e+06 9.22691e+07 3.9491e+06 21113 4.56877e+07 0 0.143231 0.994025 0.833058 9.17178e+07 0.00329609 2.01892e+07 1.9465e+07 2.04043e+07 319 2.02335e+07 1.14357e+07 0.00298541 2.0456e+07 50.2733 0.0221671 0.995157 0 50.2649 GTEX-14E6C-0626-SM-664NA 1 C1 6 pieces; no plaques; well trimmed 5.7 Blood Vessel Artery - Aorta 0001496 995 398 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989743 173031 0.972294 0.990182 0.775046 21809 1 76 0.00243501 163 0 8.23034e+07 0.0274155 116330 8.31195e+07 5.35633e+06 21833 4.09119e+07 0 0.197248 0.990182 0.767437 8.23034e+07 0.00335717 1.78542e+07 6.87063e+06 1.78866e+07 183 1.78029e+07 1.44304e+07 0.00289589 1.79828e+07 50.2513 0.00139955 0.990622 0 50.0454 GTEX-14E6C-0726-SM-664NB 1 C1 6 pieces; well trimmed 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 997 396 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989591 173989 0.974994 0.990356 0.794335 21209 1 76 0.00239016 159 0 7.47645e+07 0.024846 854079 7.54925e+07 5.20032e+06 21234 3.71808e+07 0 0.180659 0.990356 0.786675 7.47645e+07 0.00344978 1.63342e+07 7.64314e+06 1.64126e+07 182 1.63316e+07 1.13701e+07 0.00291956 1.64743e+07 50.2175 0.0113134 0.991121 0 50.1196 GTEX-14E6C-0926-SM-5S2V9 1 C1 6 pieces; well trimmed 7.1 Esophagus Esophagus - Muscularis 0004648 999 395 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.990968 279454 0.972827 0.993088 0.762469 21433 1 76 0.00208661 139 0 6.8348e+07 0.0269892 834132 6.88237e+07 6.40627e+06 21458 3.4e+07 0 0.210358 0.993088 0.757199 6.8348e+07 0.00323295 1.48937e+07 6.62963e+06 1.49861e+07 162 1.49473e+07 9.71095e+06 0.00265856 1.50717e+07 50.2072 0.0121198 0.995208 0 50.1547 GTEX-14E6C-1026-SM-5SI6P 1 C1 2 pieces; <5% fat 7.2 Nerve Nerve - Tibial 0001323 1000 395 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988656 218361 0.971951 0.991974 0.73561 23661 1 76 0.00201344 224 0 9.32457e+07 0.0277685 308328 9.40002e+07 9.6396e+06 23706 4.63558e+07 0 0.236341 0.991974 0.729706 9.32457e+07 0.00309655 2.04877e+07 1.06848e+07 2.06799e+07 233 2.07343e+07 1.55574e+07 0.00255318 2.07327e+07 49.9981 0.00328008 0.995292 0 50.2334 GTEX-14E6C-1126-SM-62LDM 1 C1 2 pieces; no lesions except for minute (50um) calcium deposit; well trimmed 7 Blood Vessel Artery - Tibial 0007610 1000 395 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987327 172301 0.9736 0.991333 0.822046 19951 1 76 0.00266348 137 0 6.34948e+07 0.0260823 276655 6.40499e+07 4.76584e+06 19967 3.15398e+07 0 0.151555 0.991333 0.814921 6.34948e+07 0.00344678 1.36331e+07 6.83398e+06 1.37578e+07 144 1.37866e+07 1.25293e+07 0.00305355 1.38396e+07 50.0961 0.00431936 0.995339 0 50.2277 GTEX-14E6C-1226-SM-5ZZUN 1 C1 2 pieces 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1001 395 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993107 248483 0.975678 0.99427 0.726173 22336 1 76 0.00216837 147 0 7.37775e+07 0.0240833 485110 7.42027e+07 6.0001e+06 22369 3.67469e+07 0 0.249505 0.99427 0.722012 7.37775e+07 0.00320823 1.63509e+07 1.05398e+07 1.64112e+07 164 1.63617e+07 1.10538e+07 0.00268769 1.64948e+07 50.2025 0.00653763 0.995432 0 50.0921 GTEX-14E6C-1326-SM-62LEQ 1 C1 2 pieces; several small ducts in 1 piece [marked] 7.1 Breast Breast - Mammary Tissue 0008367 1003 394 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989177 208261 0.978626 0.992546 0.790693 21942 1 76 0.00276987 165 0 7.71842e+07 0.0211307 439220 7.77639e+07 5.57917e+06 21967 3.83699e+07 0 0.187933 0.992546 0.784799 7.71842e+07 0.00327499 1.7021e+07 8.32269e+06 1.71629e+07 178 1.7179e+07 1.30127e+07 0.00302157 1.72422e+07 50.0918 0.00564812 0.995914 0 50.2075 GTEX-14E6C-1426-SM-5ZZWH 1 C1 2 pieces 6.7 Lung Lung 0008952 1005 392 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.991833 141267 0.969562 0.993193 0.757585 24259 1 76 0.00215185 154 0 7.34899e+07 0.0302059 145517 7.39936e+07 6.86234e+06 24297 3.65993e+07 0 0.211976 0.993193 0.752428 7.34899e+07 0.00327996 1.60921e+07 7.25108e+06 1.61649e+07 166 1.61084e+07 1.18966e+07 0.00271513 1.62487e+07 50.2167 0.00196662 0.994554 0 50.1129 GTEX-14E6C-1526-SM-664ND 1 C1 2 pieces; 10 & 5% internal fat 7.4 Muscle Muscle - Skeletal 0011907 1009 389 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992568 189909 0.981929 0.993205 0.853947 20551 1 76 0.00213327 207 0 8.84794e+07 0.0178721 710739 8.90848e+07 5.72522e+06 20568 4.40805e+07 0 0.127981 0.993205 0.848145 8.84794e+07 0.00291381 1.9358e+07 9.11444e+06 1.95538e+07 238 1.94876e+07 1.8087e+07 0.00252329 1.94819e+07 49.9928 0.00797823 0.993841 0 50.2515 GTEX-14E6C-2226-SM-5QGQG 2 C1 6 pieces 6.4 Colon Colon - Sigmoid 0001159 1029 374 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991751 239634 0.96674 0.993066 0.72387 22925 1 76 0.00204776 159 0 7.9446e+07 0.0330903 598353 8.00008e+07 4.99227e+06 22961 3.95409e+07 0 0.242869 0.993066 0.71885 7.9446e+07 0.00305736 1.72423e+07 8.98289e+06 1.73257e+07 183 1.72324e+07 1.04894e+07 0.00255189 1.74449e+07 50.3064 0.00747934 0.99438 0 50.1206 GTEX-14E6C-2426-SM-5S2NF 1 C1 6 pieces; well trimmed; 5% dermal fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1034 369 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991769 217261 0.976199 0.993279 0.765183 22892 1 76 0.00183554 160 0 7.31092e+07 0.023572 565174 7.3604e+07 5.55778e+06 22923 3.6364e+07 0 0.211015 0.993279 0.76004 7.31092e+07 0.0026505 1.62195e+07 7.68278e+06 1.63567e+07 168 1.62659e+07 1.22681e+07 0.0022424 1.6426e+07 50.2449 0.00767858 0.994788 0 50.2106 GTEX-14E6C-2626-SM-5RQJP 2 C1 2 pieces 5.8 Thyroid Thyroid 0002046 1044 361 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99027 174320 0.964835 0.991084 0.7095 22724 1 76 0.00226437 129 0 6.54978e+07 0.0349989 420771 6.6087e+07 3.24419e+06 22757 3.25792e+07 0 0.255335 0.991084 0.703174 6.54978e+07 0.00305897 1.4348e+07 7.40284e+06 1.44171e+07 149 1.43805e+07 8.02214e+06 0.00266134 1.44412e+07 50.1053 0.00636692 0.991899 0 50.12 GTEX-14E6C-2826-SM-664NC 2 C1 2 pieces; glands autolyzed, stroma intact 6.1 Prostate Prostate 0002367 1059 365 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.986043 205789 0.967479 0.985867 0.716536 23484 1 76 0.00258122 142 0 7.36358e+07 0.0323335 610583 7.46914e+07 5.41499e+06 23521 3.65364e+07 0 0.250943 0.985867 0.706409 7.36358e+07 0.00368264 1.62506e+07 9.18817e+06 1.62548e+07 162 1.61774e+07 1.00357e+07 0.00313203 1.63248e+07 50.2267 0.00817475 0.985692 0 50.0064 GTEX-14E6C-3126-SM-664ON 2 C1 1 piece; anterior and posterior present [labeled] 6.8 Pituitary Pituitary 0000007 1063 362 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 EXCLUDE 0.990278 668593 0.952671 0.991129 0.773229 23536 1 76 0.00238145 203 0 8.71853e+07 0.0471574 2.47775e+06 8.79657e+07 5.83667e+06 23570 4.33716e+07 0 0.179443 0.991129 0.766369 8.71853e+07 0.00338024 1.86915e+07 2.48135e+07 1.9008e+07 246 1.88423e+07 1.02894e+07 0.00288042 1.8943e+07 50.1333 0.0281672 0.99198 0 50.4198 GTEX-14E6D-0002-SM-5CV9L B1 Blood Whole Blood 0013756 589 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14E6D-0002-SM-7DROV B1 Blood Whole Blood 0013756 589 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14E6D-0005-SM-5N9D7 B1 8.9 Blood Whole Blood 0013756 589 BP-46767 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2013 LCSET-4904 03/22/2014 TruSeq.v1 RNASEQ 0.989727 487273 0.96949 0.990876 0.743372 20497 1 76 0.00307195 120 0 7.55712e+07 0.030007 166867 7.62671e+07 3.49298e+06 20518 3.75996e+07 0 0.226117 0.990876 0.73659 7.55712e+07 0.00368705 1.70834e+07 5.16115e+07 1.7228e+07 132 1.72243e+07 1.53746e+07 0.00337914 1.71888e+07 49.9485 0.00218793 0.992025 0 50.2107 GTEX-14E6D-0011-R10a-SM-5YY9C B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 603 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991495 991636 0.950691 0.992877 0.816147 25031 1 76 0.00262652 272 0 1.09028e+08 0.0486686 2.68292e+06 1.0981e+08 5.03719e+06 25056 5.42754e+07 0 0.134544 0.992877 0.810334 1.09028e+08 0.00327254 2.36088e+07 2.84224e+07 2.3695e+07 322 2.36558e+07 1.54563e+07 0.00294908 2.37991e+07 50.151 0.0244325 0.994258 0 50.0911 GTEX-14E6D-0011-R10a-SM-AHZ76 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 603 ChIP-Seq GTEX-14E6D-0011-R10a-SM-CYKPM B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 603 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 RIP-Seq GTEX-14E6D-0011-R11b-SM-664NP B1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 603 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989029 596857 0.942449 0.989539 0.750595 23622 1 76 0.0025884 202 0 8.67716e+07 0.0572453 1.38479e+06 8.76889e+07 5.51377e+06 23649 4.31151e+07 0 0.191854 0.989539 0.742743 8.67716e+07 0.00359939 1.867e+07 1.70667e+07 1.87379e+07 235 1.86289e+07 9.47932e+06 0.00309364 1.88382e+07 50.2793 0.0157921 0.990049 0 50.0907 GTEX-14E6D-0011-R1b-SM-5YYAW B1, A1 6.1 Brain Brain - Hippocampus 0001954 603 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992025 581873 0.958915 0.993422 0.826047 23205 1 76 0.00286881 270 0 9.01291e+07 0.0408828 5.53941e+06 9.07259e+07 3.98323e+06 23225 4.48899e+07 0 0.132868 0.993422 0.820613 9.01291e+07 0.00356144 1.94243e+07 3.33382e+07 1.98227e+07 328 1.95567e+07 7.13652e+06 0.00321464 1.98111e+07 50.323 0.0610566 0.994819 0 50.5075 GTEX-14E6D-0011-R5b-SM-69LQR B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 603 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992602 1.12519e+06 0.944524 0.993911 0.80435 23170 1 76 0.00218454 267 0 8.60973e+07 0.0552322 4.81435e+06 8.66248e+07 5.4059e+06 23183 4.29166e+07 0 0.140174 0.993911 0.799453 8.60973e+07 0.00294194 1.8485e+07 4.52957e+07 1.84464e+07 298 1.8264e+07 7.70737e+06 0.00256274 1.87828e+07 50.7002 0.055577 0.995221 0 49.9478 GTEX-14E6D-0126-SM-62LDV 1 B1 6 pieces; ~10% internal fat (periadnexal); epidermis ~40 um thick 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 790 1048 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988516 368564 0.973638 0.992158 0.786694 26764 1 76 0.0028459 410 0 1.76779e+08 0.0260442 729028 1.78177e+08 1.26028e+07 26827 8.78728e+07 0 0.186944 0.992158 0.780525 1.76779e+08 0.00348635 3.83904e+07 2.09368e+07 3.86894e+07 392 3.87694e+07 2.93331e+07 0.00316495 3.88924e+07 50.0792 0.0040916 0.9958 0 50.1939 GTEX-14E6D-0226-SM-62LDW 1 B1 2 pieces; no more than 10% fibrovasular component 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 791 1047 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.983578 223238 0.97797 0.987901 0.826223 22668 1 76 0.00296745 209 0 8.34266e+07 0.0216756 804854 8.44483e+07 6.19636e+06 22686 4.14229e+07 0 0.151748 0.987901 0.816226 8.34266e+07 0.00389173 1.8424e+07 9.89088e+06 1.85386e+07 215 1.85858e+07 1.34623e+07 0.00342757 1.87109e+07 50.1677 0.00953073 0.992224 0 50.1551 GTEX-14E6D-0326-SM-62LDX 1 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 813 1025 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.991328 223958 0.986195 0.994353 0.888032 19468 1 76 0.00254725 268 0 1.06655e+08 0.0135579 976664 1.07261e+08 7.86007e+06 19475 5.30874e+07 0 0.0981636 0.994353 0.883017 1.06655e+08 0.00294583 2.31091e+07 1.27444e+07 2.31295e+07 274 2.31715e+07 2.37917e+07 0.00274593 2.33542e+07 50.1964 0.00910552 0.997377 0 50.022 GTEX-14E6D-0326-SM-CYKP3 1 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 813 1025 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 RIP-Seq GTEX-14E6D-0926-SM-5S2QV 1 B1 2 pieces; accentuation of interstitial component 5.7 Heart Heart - Left Ventricle 0006566 886 952 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992564 77990 0.988068 0.993873 0.86704 17785 1 76 0.00258346 141 0 5.20701e+07 0.0118865 4.64194e+06 5.23911e+07 2.85137e+06 17789 2.59394e+07 0 0.121028 0.993873 0.861728 5.20701e+07 0.00357371 1.1623e+07 1.73889e+07 1.18957e+07 180 1.18307e+07 2.21408e+06 0.00307794 1.17411e+07 49.8098 0.0886016 0.995182 0 50.5798 GTEX-14E6D-1026-SM-5S2RS 2 B1 2 pieces; congestion and atelectasis 6.4 Lung Lung 0008952 892 946 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 RNASEQ 0.989261 196321 0.964419 0.990405 0.664524 25817 1 76 0.00212092 141 0 7.92231e+07 0.0352111 250663 7.99906e+07 4.03132e+06 25866 3.93895e+07 0 0.299894 0.990405 0.658148 7.92231e+07 0.00286554 1.72993e+07 7.89166e+06 1.74744e+07 163 1.74048e+07 1.01703e+07 0.0024928 1.74588e+07 50.0774 0.00313366 0.991549 0 50.2518 GTEX-14E6D-1026-SM-CYKRZ 2 B1 2 pieces; congestion and atelectasis 6.4 Lung Lung 0008952 892 946 BP-48647 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 RIP-Seq GTEX-14E6D-1326-SM-62LES 1 B1 2 pieces 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 913 925 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986857 256081 0.972836 0.990467 0.836314 23364 1 76 0.00277883 162 0 7.13516e+07 0.0268573 287303 7.20383e+07 4.86379e+06 23384 3.54448e+07 0 0.136522 0.990467 0.828341 7.13516e+07 0.00357587 1.56134e+07 9.82998e+06 1.57652e+07 175 1.5756e+07 1.26454e+07 0.0031759 1.58715e+07 50.1826 0.0039882 0.994077 0 50.2419 GTEX-14E6D-2526-SM-5YYA9 2 B1 6 pieces; glomeruli in all sections; congestion 7.5 Kidney Kidney - Cortex 0001225 970 868 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989115 273708 0.974291 0.990671 0.875618 23436 1 76 0.00281731 372 0 1.02312e+08 0.0254787 6.65113e+06 1.03275e+08 4.9721e+06 23454 5.08923e+07 0 0.0986723 0.990671 0.867449 1.02312e+08 0.00353818 2.27477e+07 1.7474e+07 2.31801e+07 381 2.31334e+07 1.37874e+07 0.00317718 2.29519e+07 49.803 0.0644018 0.992227 0 50.4707 GTEX-14E6D-2926-SM-664OP 1 B1 2 pieces; two pieces markedly fragmented 6.4 Brain Brain - Cerebellum 0002037 1010 828 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990163 1.13034e+06 0.921566 0.991044 0.714622 24635 1 76 0.0026687 270 0 1.15179e+08 0.0781007 3.00204e+06 1.1622e+08 7.29147e+06 24670 5.73405e+07 0 0.206944 0.991044 0.708222 1.15179e+08 0.00342843 2.40206e+07 6.36365e+07 2.4495e+07 324 2.44184e+07 1.04372e+07 0.00304823 2.42053e+07 49.7809 0.0258308 0.991926 0 50.4889 GTEX-14E6E-0001-SM-5DU3J B1 Blood Whole Blood 0013756 -109 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-4834 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14E6E-0001-SM-7DRNZ B1 Blood Whole Blood 0013756 -109 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14E6E-0006-SM-5MR5N B1 9.1 Blood Whole Blood 0013756 -109 BP-46767 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2013 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.993995 557593 0.959934 0.994426 0.789715 18918 1 76 0.003034 199 0 9.16471e+07 0.0396207 243744 9.21608e+07 3.49749e+06 18934 4.56889e+07 0 0.170219 0.994426 0.785313 9.16471e+07 0.00301969 1.99048e+07 2.6464e+07 2.00327e+07 220 2.0033e+07 1.77452e+07 0.00302685 1.99506e+07 49.8969 0.00264477 0.994857 0 50.1601 GTEX-14E6E-0126-SM-73KXH 1 B1 2 fragmented pieces; up to 1.6mm peripheral fat 9.6 Adrenal Gland Adrenal Gland 0002369 99 677 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995639 236747 0.977766 0.996417 0.856699 22059 1 76 0.00259662 268 0 8.36308e+07 0.0217896 1.84921e+06 8.39315e+07 8.3502e+06 22075 4.17005e+07 0 0.121068 0.996417 0.853629 8.36308e+07 0.00278049 1.85447e+07 9.50257e+06 1.86682e+07 256 1.86571e+07 1.43435e+07 0.00268849 1.86081e+07 49.9343 0.0220324 0.997195 0 50.1659 GTEX-14E6E-0226-SM-7DUEF 0 B1 2 pieces 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 104 672 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993045 316850 0.976437 0.993624 0.835197 24914 1 76 0.00265192 278 0 1.07803e+08 0.0230985 677998 1.08495e+08 9.95348e+06 24947 5.36702e+07 0 0.14124 0.993624 0.829872 1.07803e+08 0.00415615 2.38204e+07 1.00905e+07 2.40231e+07 327 2.40784e+07 2.02078e+07 0.0034036 2.38296e+07 49.7404 0.00624914 0.994204 0 50.2118 GTEX-14E6E-0326-SM-73KY6 0 B1 2 pieces 7.6 Thyroid Thyroid 0002046 105 671 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992761 181157 0.970839 0.993924 0.816606 23340 1 76 0.00258226 161 0 7.62251e+07 0.028843 562745 7.66911e+07 7.94336e+06 23368 3.79592e+07 0 0.154232 0.993924 0.811644 7.62251e+07 0.00320738 1.68109e+07 7.79226e+06 1.68394e+07 176 1.68349e+07 1.39178e+07 0.00289445 1.69029e+07 50.1008 0.00733781 0.995087 0 50.0422 GTEX-14E6E-0426-SM-73KUE 0 B1 2 pieces 8.6 Lung Lung 0008952 107 669 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992468 348519 0.977113 0.993464 0.821667 25112 1 76 0.00418015 276 0 1.19826e+08 0.0225171 990643 1.20614e+08 5.34750e+06 25142 5.96811e+07 0 0.155446 0.993464 0.816297 1.19826e+08 0.00411877 2.66022e+07 1.12958e+07 2.69915e+07 317 2.69561e+07 2.18285e+07 0.00414949 2.6755e+07 49.8128 0.00821334 0.994461 0 50.3632 GTEX-14E6E-0526-SM-793DN 0 B1 6 pieces; well trimmed 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 116 660 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992523 262028 0.970444 0.993892 0.800364 23813 1 76 0.00291752 170 0 7.54573e+07 0.029381 1.02663e+06 7.59211e+07 1.09966e+07 23837 3.75964e+07 0 0.17008 0.993892 0.795475 7.54573e+07 0.00361439 1.66065e+07 8.97108e+06 1.67919e+07 183 1.67492e+07 1.17513e+07 0.00326547 1.67505e+07 50.0019 0.0135223 0.99526 0 50.2776 GTEX-14E6E-0626-SM-73KX6 0 B1 6 pieces; mostly muscle with some submucosal stroma 8.8 Esophagus Esophagus - Muscularis 0004648 122 654 BP-48119 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99455 204473 0.980905 0.995664 0.87752 20881 1 76 0.00245254 177 0 7.49916e+07 0.0187827 954762 7.53182e+07 7.46548e+06 20892 3.73747e+07 0 0.103385 0.995664 0.873715 7.49916e+07 0.00295073 1.62619e+07 5.60412e+06 1.63453e+07 196 1.63108e+07 1.42542e+07 0.00270136 1.63765e+07 50.1005 0.0126764 0.996777 0 50.1278 GTEX-14E6E-0726-SM-5S2R3 0 B1 6 pieces; well preserved and well dissected 9.4 Esophagus Esophagus - Mucosa 0006920 128 648 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992787 118296 0.97931 0.993979 0.854073 20860 1 76 0.00171799 130 0 5.82237e+07 0.0203169 316522 5.85763e+07 3.4274e+06 20871 2.90202e+07 0 0.125237 0.993979 0.848931 5.82237e+07 0.0023211 1.315e+07 7.83507e+06 1.32471e+07 136 1.32333e+07 1.28876e+07 0.00201919 1.32324e+07 49.9984 0.00540358 0.995172 0 50.1838 GTEX-14E6E-0826-SM-664N7 0 B1 6 pieces; well trimmed muscle 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 133 643 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992731 153793 0.977639 0.993529 0.837633 22900 1 76 0.00219064 279 0 9.83692e+07 0.0220252 957318 9.90098e+07 6.10025e+06 22920 4.89882e+07 0 0.140006 0.993529 0.832213 9.83692e+07 0.00311579 2.14779e+07 7.77849e+06 2.16093e+07 287 2.14918e+07 1.83349e+07 0.00265284 2.16707e+07 50.2073 0.00966892 0.994327 0 50.1524 GTEX-14E6E-0926-SM-664N8 1 B1 6 pieces; well preserved oxyntic glands, sloughed foveolar (surface) epithelium; no muscularis propria 7 Stomach Stomach 0000945 136 640 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.985866 152905 0.983042 0.986736 0.863206 22315 1 76 0.00238706 364 0 8.96539e+07 0.0166669 1.19697e+06 9.08591e+07 5.68414e+06 22337 4.46729e+07 0 0.119836 0.986736 0.851757 8.96539e+07 0.00317707 2.06278e+07 1.00859e+08 2.10609e+07 283 2.09935e+07 2.41563e+07 0.00278172 2.07698e+07 49.7322 0.0131739 0.987605 0 50.5195 GTEX-14E6E-1026-SM-664N9 0 B1 2 pieces; spermatogenesis 6.7 Testis Testis 0000473 138 638 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991296 330947 0.936806 0.992065 0.750144 34604 1 76 0.0023407 285 0 1.28701e+08 0.0628428 1.35714e+06 1.2973e+08 8.33967e+06 34686 6.41196e+07 0 0.186663 0.992065 0.744191 1.28701e+08 0.00303786 2.71865e+07 1.76387e+07 2.72677e+07 309 2.72435e+07 2.2471e+07 0.00268901 2.72983e+07 50.0502 0.0104612 0.992833 0 50.0745 GTEX-14E6E-1126-SM-5S2R4 1 B1 2 pieces; well preserved 7.6 Prostate Prostate 0002367 143 633 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992396 143472 0.971999 0.993662 0.816071 23767 1 76 0.00172523 131 0 6.03583e+07 0.0276028 219960 6.07433e+07 3.46284e+06 23781 3.00706e+07 0 0.155928 0.993662 0.810899 6.03583e+07 0.00241087 1.32149e+07 5.19795e+06 1.3376e+07 142 1.33471e+07 1.13927e+07 0.00206761 1.33206e+07 49.9503 0.00362114 0.994928 0 50.303 GTEX-14E6E-1226-SM-5S2R5 1 B1 2 pieces; not congested 6.8 Spleen Spleen 0002106 145 631 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.989948 150076 0.965433 0.991259 0.791019 22503 1 76 0.00247059 117 0 5.24382e+07 0.0329795 315562 5.29006e+07 3.00438e+06 22520 2.60707e+07 0 0.174414 0.991259 0.784105 5.24382e+07 0.00320523 1.15445e+07 7.7097e+06 1.16567e+07 124 1.1635e+07 8.59211e+06 0.00283742 1.16346e+07 49.9991 0.00596519 0.992571 0 50.2419 GTEX-14E6E-1326-SM-5S2NR 0 B1 2 pieces; several small mammary ducts in adipose tissue, too small for any analysis except LCM 6.4 Breast Breast - Mammary Tissue 0008367 148 628 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992114 233465 0.976279 0.993627 0.827594 21670 1 76 0.00173509 169 0 7.2072e+07 0.0234003 642269 7.25342e+07 4.73013e+06 21684 3.58757e+07 0 0.148685 0.993627 0.82232 7.2072e+07 0.00261471 1.59058e+07 6.62518e+06 1.60439e+07 188 1.5952e+07 1.19501e+07 0.00217423 1.61035e+07 50.2364 0.0088547 0.995141 0 50.2161 GTEX-14E6E-1426-SM-5RQI2 0 B1 2 pieces; abundant islets; 10% internal fat content as individual cells 8 Pancreas Pancreas 0001150 152 624 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993229 162743 0.975472 0.994454 0.848637 21401 1 76 0.0021482 115 0 6.35412e+07 0.0243245 246804 6.38955e+07 3.16936e+06 21416 3.16479e+07 0 0.126835 0.994454 0.843931 6.35412e+07 0.00309303 1.44796e+07 1.0768e+07 1.46495e+07 120 1.45777e+07 1.73291e+07 0.00262003 1.46343e+07 50.0968 0.00386262 0.99568 0 50.2916 GTEX-14E6E-1526-SM-5RQIG 0 B1 6 pieces; 4 have no muscle, 2 have small amounts of muscle 6.9 Colon Colon - Transverse 0001157 159 617 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990536 148568 0.975072 0.991535 0.85072 20914 1 76 0.00228781 154 0 5.82166e+07 0.0247271 1.80223e+06 5.87136e+07 2.89461e+06 20928 2.8962e+07 0 0.124353 0.991535 0.843519 5.82166e+07 0.00319372 1.29377e+07 6.56762e+06 1.3161e+07 168 1.30007e+07 7.40149e+06 0.00274031 1.31481e+07 50.282 0.0306953 0.992535 0 50.4279 GTEX-14E6E-1626-SM-5RQI7 0 B1 6 pieces; all have abundant lymphoid tissue; 2 have 1 and 2 mm extraneous muscularis propria [labeled] 8 Small Intestine Small Intestine - Terminal Ileum 0001211 164 612 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990997 176478 0.967755 0.991809 0.790313 24038 1 76 0.00235884 155 0 7.19225e+07 0.0316607 707947 7.25164e+07 3.19175e+06 24069 3.58124e+07 0 0.177443 0.991809 0.78384 7.19225e+07 0.00308462 1.58636e+07 7.71153e+06 1.61243e+07 170 1.6048e+07 1.12504e+07 0.00272143 1.59944e+07 49.9164 0.00976258 0.992622 0 50.4076 GTEX-14E6E-1726-SM-5S2R6 0 B1 6 pieces; well dissected muscularis propria 7.6 Colon Colon - Sigmoid 0001159 166 610 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993688 154304 0.976166 0.995005 0.848844 21257 1 76 0.00166392 143 0 6.21018e+07 0.0234824 635145 6.24136e+07 3.46882e+06 21269 3.09303e+07 0 0.127322 0.995005 0.844604 6.21018e+07 0.00241428 1.34136e+07 5.20161e+06 1.35408e+07 150 1.34969e+07 1.20483e+07 0.00203861 1.35371e+07 50.0744 0.0101764 0.996323 0 50.2359 GTEX-14E6E-1826-SM-5S2R7 0 B1 6 pieces; considerable deep fat and intradermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 395 381 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.993162 130553 0.977155 0.994424 0.811827 21621 1 76 0.00171229 138 0 5.72339e+07 0.0225914 294309 5.75548e+07 3.28859e+06 21637 2.85007e+07 0 0.165327 0.994424 0.807301 5.72339e+07 0.0024705 1.26009e+07 5.7494e+06 1.27068e+07 138 1.26632e+07 1.05907e+07 0.00209091 1.27169e+07 50.1058 0.00511354 0.995686 0 50.2093 GTEX-14E6E-1926-SM-664N4 0 B1 2 pieces 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 396 380 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992348 149265 0.979369 0.992883 0.818141 22929 1 76 0.00226349 209 0 8.74852e+07 0.0202801 370898 8.81122e+07 5.31036e+06 22956 4.35434e+07 0 0.161227 0.992883 0.812319 8.74852e+07 0.00320924 1.95022e+07 6.87246e+06 1.94797e+07 214 1.94241e+07 1.64691e+07 0.00273611 1.96076e+07 50.2351 0.00420938 0.993418 0 49.9712 GTEX-14E6E-2026-SM-664N5 0 B1 2 pieces; 10% internal fat 8.1 Muscle Muscle - Skeletal 0011907 401 375 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993955 149969 0.98607 0.994581 0.890916 19481 1 76 0.00213687 276 0 9.51276e+07 0.0136928 1.19572e+06 9.56459e+07 6.1368e+06 19484 4.74313e+07 0 0.0951539 0.994581 0.886089 9.51276e+07 0.00274025 2.09391e+07 1.06316e+07 2.10138e+07 274 2.09329e+07 2.02005e+07 0.00243837 2.10777e+07 50.1724 0.0125015 0.995207 0 50.089 GTEX-14E6E-2126-SM-664N6 0 B1 2 pieces; well trimmed; no lesions 7.2 Blood Vessel Artery - Tibial 0007610 411 365 BP-48857 RNA Extraction from Paxgene-derived Lysate Plate Based 01/29/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991156 191344 0.978759 0.991817 0.863231 21682 1 76 0.00224298 276 0 9.53918e+07 0.0207594 425536 9.61788e+07 6.3215e+06 21698 4.74537e+07 0 0.115528 0.991817 0.856167 9.53918e+07 0.00322252 2.06801e+07 7.22376e+06 2.08015e+07 257 2.07201e+07 2.03356e+07 0.00273242 2.08276e+07 50.1294 0.00442443 0.992478 0 50.1463 GTEX-14E6E-2226-SM-5SI6F 0 B1 2 pieces; up to 30% external fat; focus of extraneous bone fragments [labeled] 6.2 Nerve Nerve - Tibial 0001323 406 370 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988132 237820 0.97019 0.991672 0.758007 23579 1 76 0.00198531 168 0 7.38206e+07 0.0295545 265904 7.44405e+07 7.36893e+06 23614 3.66753e+07 0 0.212182 0.991672 0.751695 7.38206e+07 0.00336169 1.61863e+07 6.716e+06 1.63202e+07 169 1.63336e+07 1.18872e+07 0.00267104 1.64286e+07 50.1451 0.00357203 0.995213 0 50.2061 GTEX-14E6E-5001-SM-AN42D B1 Lung Lung 0008952 109 ChIP-Seq GTEX-14E7W-0001-SM-5CV9I C1 Blood Whole Blood 0013756 1069 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14E7W-0001-SM-7DROS C1 Blood Whole Blood 0013756 1069 BP-46788 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14E7W-0006-SM-5N9GG C1 8.8 Blood Whole Blood 0013756 1069 BP-46767 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.975843 380949 0.980729 0.977585 0.767085 20797 1 76 0.00435955 129 0 9.1203e+07 0.0185476 191858 9.32942e+07 4.77801e+06 20821 4.53159e+07 0 0.213644 0.977585 0.74989 9.1203e+07 0.00443441 2.09795e+07 7.90652e+07 2.11196e+07 154 2.11481e+07 2.0107e+07 0.00439691 2.11129e+07 49.9583 0.00205648 0.979327 0 50.1664 GTEX-14E7W-0011-R10a-SM-5YYAX C1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 1076 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992749 899610 0.95164 0.993859 0.812191 25033 1 76 0.00244318 273 0 1.08181e+08 0.0479177 2.94188e+06 1.08849e+08 4.89785e+06 25060 5.38837e+07 0 0.139448 0.993859 0.807204 1.08181e+08 0.00290549 2.33985e+07 2.74268e+07 2.36035e+07 320 2.35369e+07 1.41919e+07 0.00267408 2.35799e+07 50.0456 0.0270271 0.994968 0 50.2181 GTEX-14E7W-0011-R10a-SM-CYKPN C1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 1076 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 RIP-Seq GTEX-14E7W-0011-R11a-SM-5ZZVA C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 1076 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993483 633718 0.947522 0.994732 0.790231 25279 1 76 0.00203197 199 0 7.57097e+07 0.0520681 2.22888e+06 7.61107e+07 6.84312e+06 25302 3.77249e+07 0 0.157292 0.994732 0.786068 7.57097e+07 0.00306678 1.63784e+07 2.04229e+07 1.64025e+07 239 1.63625e+07 9.33548e+06 0.00254873 1.6516e+07 50.2334 0.0292847 0.995981 0 50.0368 GTEX-14E7W-0011-R1b-SM-5YYAT C1, A1 7.1 Brain Brain - Hippocampus 0001954 1076 BP-49132 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991286 1.08148e+06 0.945284 0.992322 0.791091 25078 1 76 0.0024313 374 0 1.01503e+08 0.0544166 5.94474e+06 1.02289e+08 4.16638e+06 25114 5.05383e+07 0 0.154192 0.992322 0.785018 1.01503e+08 0.00297793 2.18505e+07 3.9895e+07 2.21824e+07 354 2.19418e+07 1.06952e+07 0.00270433 2.21991e+07 50.2915 0.0581173 0.993359 0 50.3768 GTEX-14E7W-0011-R3b-SM-5YYB5 C1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1076 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991528 786516 0.959627 0.99284 0.849191 22956 1 76 0.00231816 372 0 9.59418e+07 0.0399887 8.56676e+06 9.66337e+07 4.2192e+06 22972 4.77701e+07 0 0.110437 0.99284 0.84311 9.59418e+07 0.00300925 2.08043e+07 3.39427e+07 2.11418e+07 364 2.08285e+07 1.03069e+07 0.00266325 2.12356e+07 50.4839 0.0886519 0.994152 0 50.4022 GTEX-14E7W-0011-R4b-SM-62LEA C1, A1 6.6 Brain Brain - Amygdala 0001876 1076 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987324 1.09455e+06 0.940133 0.99164 0.835483 22459 1 76 0.00255256 210 0 7.94181e+07 0.0596244 3.31024e+06 8.00877e+07 5.54455e+06 22473 3.94464e+07 0 0.10465 0.99164 0.828498 7.94181e+07 0.00364687 1.69803e+07 2.94364e+07 1.7255e+07 247 1.7065e+07 1.00588e+07 0.00309733 1.75197e+07 50.6573 0.0413327 0.995955 0 50.4012 GTEX-14E7W-0011-R5b-SM-664NS C1, A1 9 Brain Brain - Caudate (basal ganglia) 0001873 1076 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5303 06/24/2014 TruSeq.v1 EXCLUDE 0.981383 687301 0.949914 0.980135 0.775039 25047 1 76 0.00261898 269 0 9.85314e+07 0.049547 2.12401e+06 1.00528e+08 8.26429e+06 25082 4.87227e+07 0 0.174875 0.980135 0.759643 9.85314e+07 0.00376716 2.15463e+07 1.64782e+07 2.13951e+07 319 2.13328e+07 1.27227e+07 0.0031938 2.15117e+07 50.2088 0.0211285 0.978887 0 49.8239 GTEX-14E7W-0011-R6b-SM-5ZZV3 C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1076 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993977 1.26248e+06 0.939433 0.99506 0.844088 22651 1 76 0.00180349 270 0 7.80059e+07 0.0601157 3.86643e+06 7.83932e+07 7.42738e+06 22661 3.88905e+07 0 0.0953447 0.99506 0.839919 7.80059e+07 0.002714 1.66545e+07 3.79371e+07 1.68745e+07 269 1.67535e+07 1.02393e+07 0.00225825 1.68772e+07 50.1838 0.049321 0.996144 0 50.3282 GTEX-14E7W-0011-R7b-SM-5ZZV4 C1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 1076 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993767 591051 0.961236 0.995363 0.85391 20211 1 76 0.00169648 265 0 7.10718e+07 0.0385948 7.04283e+06 7.14029e+07 6.58699e+06 20220 3.54217e+07 0 0.107326 0.995363 0.84995 7.10718e+07 0.00304813 1.54569e+07 3.124e+07 1.5698e+07 309 1.53512e+07 5.34532e+06 0.00237122 1.59125e+07 50.8977 0.098635 0.996958 0 50.3868 GTEX-14E7W-0011-R9a-SM-62LE6 C1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1076 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989972 830324 0.946647 0.993308 0.83893 22217 1 76 0.00248446 223 0 7.49022e+07 0.0529908 2.22515e+06 7.54069e+07 5.03872e+06 22235 3.72374e+07 0 0.107717 0.993308 0.833316 7.49022e+07 0.00316663 1.63679e+07 2.14126e+07 1.66282e+07 217 1.64336e+07 1.09449e+07 0.0028244 1.68217e+07 50.5836 0.0295086 0.996643 0 50.3945 GTEX-14E7W-0126-SM-6LLJ9 1 C1 6 pieces; ~10% internal fat (periadnexal); well trimmed 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1146 1310 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975398 175798 0.961322 0.983769 0.69798 25255 1 76 0.00265163 148 0 7.43352e+07 0.0384792 216362 7.55616e+07 6.76001e+06 25300 3.67124e+07 0 0.263341 0.983769 0.686651 7.43352e+07 0.00407336 1.61227e+07 8.4404e+06 1.60599e+07 151 1.62744e+07 1.0454e+07 0.00335645 1.65111e+07 50.3609 0.00286339 0.99214 0 49.9025 GTEX-14E7W-0426-SM-5S2O4 1 C1 2 pieces; less than 10% internal fat 7.1 Nerve Nerve - Tibial 0001323 1155 1303 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992503 248513 0.966736 0.993953 0.766505 24397 1 76 0.00185391 191 0 8.01528e+07 0.0329108 224584 8.06404e+07 5.22852e+06 24437 3.98883e+07 0 0.200232 0.993953 0.761869 8.01528e+07 0.00269051 1.75977e+07 7.00392e+06 1.77308e+07 195 1.76677e+07 1.29334e+07 0.0022716 1.77747e+07 50.1509 0.00278501 0.995403 0 50.1883 GTEX-14E7W-0526-SM-5S2W8 1 C1 2 pieces; significant medial calcifications and atheromatous plaque with luminal obliteration (less than 25%) 6.6 Blood Vessel Artery - Tibial 0007610 1157 1301 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.993059 141674 0.97188 0.994461 0.819545 22306 1 76 0.00182883 211 0 8.18854e+07 0.0276929 255311 8.23415e+07 8.21755e+06 22326 4.0792e+07 0 0.152334 0.994461 0.815006 8.18854e+07 0.00255187 1.75496e+07 6.59556e+06 1.76386e+07 222 1.76004e+07 1.58147e+07 0.00218984 1.76973e+07 50.1373 0.00310064 0.995864 0 50.1265 GTEX-14E7W-0726-SM-664OK 1 C1 2 pieces; decreased spermatogenesis 6.5 Testis Testis 0000473 1181 1279 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990507 283959 0.930917 0.991093 0.703892 34056 1 76 0.00240464 280 0 1.00924e+08 0.0687912 1.11382e+06 1.01831e+08 5.89369e+06 34134 5.02388e+07 0 0.227025 0.991093 0.697622 1.00924e+08 0.00314641 2.11549e+07 1.3327e+07 2.12331e+07 260 2.11634e+07 1.4163e+07 0.00277531 2.12784e+07 50.1354 0.0109379 0.991678 0 50.0922 GTEX-14E7W-0826-SM-62LEJ 1 C1 2 pieces; adipose tissue with fibrovascular component and no evidence of ductal structures 6.8 Breast Breast - Mammary Tissue 0008367 1182 1278 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987071 160826 0.976089 0.990741 0.7892 23275 1 76 0.00278348 137 0 6.7888e+07 0.0235776 544239 6.85225e+07 4.81438e+06 23303 3.37349e+07 0 0.186889 0.990741 0.781893 6.7888e+07 0.00360146 1.50319e+07 7.60406e+06 1.50863e+07 164 1.51094e+07 9.85476e+06 0.00319095 1.52385e+07 50.2127 0.00794249 0.994411 0 50.0902 GTEX-14E7W-0926-SM-5YYA4 1 C1 2 pieces; mild interstitial fibrosis 7.1 Thyroid Thyroid 0002046 1187 1273 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990872 201804 0.966918 0.992012 0.774825 24630 1 76 0.00264007 166 0 8.08332e+07 0.0327485 234541 8.14841e+07 3.3642e+06 24667 4.02309e+07 0 0.192093 0.992012 0.768636 8.08332e+07 0.00335802 1.77087e+07 7.92886e+06 1.78266e+07 181 1.78186e+07 1.36687e+07 0.00299863 1.78096e+07 49.9874 0.00287837 0.993153 0 50.1658 GTEX-14E7W-1026-SM-62LEK 1 C1 2 pieces; atherosclerotic plaque and attached adventitia with external fat merasuring up to 0.8mm 6 Blood Vessel Artery - Coronary 0001621 1193 1268 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.984286 151863 0.962308 0.987925 0.695227 23436 1 76 0.00315543 122 0 6.04343e+07 0.0374239 349345 6.1173e+07 4.38174e+06 23470 2.99918e+07 0 0.267081 0.987925 0.686832 6.04343e+07 0.00394359 1.31202e+07 5.97200e+06 1.3141e+07 133 1.31546e+07 7.3435e+06 0.00354806 1.33091e+07 50.292 0.00571077 0.991564 0 50.0395 GTEX-14E7W-1126-SM-5ZZVS 1 C1 2 pieces; fibromuscular tissue; one piece with up to 50% internal fat 6.3 Heart Heart - Atrial Appendage 0006631 1196 1266 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993299 164479 0.969278 0.994814 0.785836 24380 1 76 0.00200431 150 0 7.11888e+07 0.0303171 1.5065e+06 7.15599e+07 5.96877e+06 24406 3.54595e+07 0 0.183442 0.994814 0.781761 7.11888e+07 0.00326486 1.52539e+07 7.38016e+06 1.528e+07 174 1.52297e+07 1.06537e+07 0.00263362 1.54069e+07 50.2892 0.0210522 0.99633 0 50.0427 GTEX-14E7W-1226-SM-5RQIU 1 C1 2 pieces; mild interstitial fibrosis with patchy focal scarring 5.9 Heart Heart - Left Ventricle 0006566 1198 1264 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99006 108595 0.987874 0.991316 0.846801 18148 1 76 0.00165103 261 0 7.26639e+07 0.0120831 4.97179e+06 7.33005e+07 3.64638e+06 18152 3.62093e+07 0 0.141073 0.991316 0.839447 7.26639e+07 0.00250292 1.55034e+07 3.50106e+07 1.62902e+07 326 1.58467e+07 3.05385e+06 0.00207643 1.60104e+07 50.257 0.0678275 0.992572 0 51.2374 GTEX-14E7W-1226-SM-CYKOO 1 C1 2 pieces; mild interstitial fibrosis with patchy focal scarring 5.9 Heart Heart - Left Ventricle 0006566 1198 1264 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 RIP-Seq GTEX-14E7W-1326-SM-5RQIV 1 C1 2 pieces; congestion and focal atelectasis 6.6 Lung Lung 0008952 1199 1264 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991072 172353 0.974459 0.992135 0.745499 22162 1 76 0.00249781 123 0 5.62152e+07 0.0250771 259772 5.66608e+07 2.91655e+06 22186 2.79592e+07 0 0.22896 0.992135 0.739636 5.62152e+07 0.00341135 1.24711e+07 4.97074e+06 1.25886e+07 132 1.25725e+07 7.91851e+06 0.00295409 1.25465e+07 49.9483 0.00458468 0.993198 0 50.2345 GTEX-14E7W-1426-SM-6LLJ2 1 C1 6 pieces; flat atherosclerosis and focal dissection of media with fresh hemorrhage (rep. outlined); congested adventitia 7.4 Blood Vessel Artery - Aorta 0001496 1200 1263 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.973492 178728 0.969239 0.982819 0.728244 23157 1 76 0.00280066 136 0 7.26292e+07 0.0303287 176275 7.38989e+07 6.54007e+06 23185 3.58127e+07 0 0.240995 0.982819 0.715732 7.26292e+07 0.00432671 1.56192e+07 6.06151e+06 1.5547e+07 148 1.57785e+07 1.13335e+07 0.00355644 1.60331e+07 50.4001 0.00238535 0.992146 0 49.8842 GTEX-14E7W-1526-SM-6871X 1 C1 2 pieces; congestion; distended sinusoids and fine droplets of bile in cytoplasm of the liver cells; 7.3 Liver Liver 0001114 1202 1262 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992995 244284 0.974397 0.993555 0.812362 22687 1 76 0.00196074 271 0 1.02624e+08 0.0254044 990669 1.03289e+08 4.81542e+06 22711 5.1162e+07 0 0.162034 0.993555 0.807127 1.02624e+08 0.00234479 2.23015e+07 1.48168e+07 2.22973e+07 301 2.22303e+07 1.83552e+07 0.00215266 2.2419e+07 50.2114 0.00959119 0.994116 0 49.9953 GTEX-14E7W-1726-SM-5ZZWB 1 C1 4 pieces; large [up to 1.8x0.5mm] submucosal glands in 3 pieces, congestion and 161um thick squamous epithelium 6.3 Esophagus Esophagus - Mucosa 0006920 1204 1262 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.99142 124785 0.968861 0.992963 0.770817 22217 1 76 0.00208985 127 0 5.84354e+07 0.0309551 936574 5.88495e+07 5.26636e+06 22239 2.90964e+07 0 0.198044 0.992963 0.765393 5.84354e+07 0.00339485 1.28097e+07 5.61478e+06 1.28746e+07 150 1.27946e+07 7.29185e+06 0.00274134 1.29765e+07 50.353 0.0159147 0.994506 0 50.1265 GTEX-14E7W-1826-SM-69LQ1 1 C1 6 pieces; well trimmed 6.8 Esophagus Esophagus - Muscularis 0004648 1206 1260 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991211 234210 0.967739 0.99259 0.773508 23438 1 76 0.00199526 199 0 8.21312e+07 0.0320619 932771 8.27444e+07 4.9465e+06 23465 4.09016e+07 0 0.194231 0.99259 0.767776 8.21312e+07 0.00283556 1.76699e+07 7.16497e+06 1.78154e+07 215 1.77346e+07 1.1059e+07 0.00241483 1.78541e+07 50.1679 0.0112729 0.993968 0 50.205 GTEX-14E7W-1926-SM-5S2R9 1 C1 6 pieces; 5 - 25% internal/external fat 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 1207 1259 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.990728 108706 0.967707 0.992078 0.768927 21959 1 76 0.00187425 114 0 5.21785e+07 0.0320746 480553 5.25951e+07 3.2226e+06 21976 2.59656e+07 0 0.198779 0.992078 0.762836 5.21785e+07 0.00266745 1.12432e+07 4.36096e+06 1.14078e+07 129 1.13454e+07 7.48161e+06 0.00227031 1.1375e+07 50.0652 0.00913684 0.993429 0 50.3633 GTEX-14E7W-2326-SM-69LQC 1 C1 2 pieces; 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1213 1256 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992866 143554 0.973395 0.99412 0.767959 23817 1 76 0.00203649 141 0 6.77571e+07 0.0262313 472725 6.81579e+07 4.13522e+06 23837 3.37439e+07 0 0.205436 0.99412 0.763444 6.77571e+07 0.0028302 1.50462e+07 6.73117e+06 1.5082e+07 162 1.50692e+07 1.02686e+07 0.00243284 1.5142e+07 50.1206 0.00693574 0.995374 0 50.0595 GTEX-14E7W-2926-SM-5S2R8 1 C1 4 pieces 6.2 Brain Brain - Cerebellum 0002037 1242 1230 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.991648 434713 0.925074 0.992713 0.685682 22705 1 76 0.00203894 104 0 5.32523e+07 0.0745638 621236 5.36432e+07 3.02828e+06 22726 2.65129e+07 0 0.239392 0.992713 0.680685 5.32523e+07 0.00277755 1.11776e+07 2.13295e+07 1.14449e+07 120 1.14212e+07 6.11186e+06 0.00240785 1.12615e+07 49.6479 0.0115809 0.993777 0 50.5907 GTEX-14E7W-3126-SM-68725 1 C1 1 piece; 55% adenohypophysis, 30% neurohypophysis, and 15% congested dense fibrous tissue 6.9 Pituitary Pituitary 0000007 1244 1229 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.98953 384859 0.955689 0.990259 0.738844 25324 1 76 0.00215025 161 0 8.13683e+07 0.0440648 450362 8.21686e+07 4.56754e+06 25366 4.05219e+07 0 0.216845 0.990259 0.731647 8.13683e+07 0.00274004 1.74937e+07 1.40408e+07 1.76355e+07 193 1.75954e+07 1.17075e+07 0.00244493 1.75934e+07 49.9971 0.00548095 0.990988 0 50.2018 GTEX-14H4A-0003-SM-5DU4K B1 Blood Whole Blood 0013756 -170 BP-46998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14H4A-0003-SM-7DRO5 B1 Blood Whole Blood 0013756 -170 BP-46998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14H4A-0006-SM-5N9E3 B1 8.7 Blood Whole Blood 0013756 -170 BP-47123 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.987437 780050 0.960358 0.989045 0.771938 19927 1 76 0.0043434 199 0 1.05736e+08 0.0389022 251796 1.06907e+08 5.0023e+06 19943 5.25581e+07 0 0.18842 0.989045 0.763481 1.05736e+08 0.00438714 2.32434e+07 5.86322e+07 2.33981e+07 239 2.34259e+07 2.07618e+07 0.00436523 2.33897e+07 49.9614 0.00235528 0.990653 0 50.1658 GTEX-14H4A-0226-SM-5SI6Q 1 B1 2 pieces; possible medullary hyperplasia, residual attached fat 7.8 Adrenal Gland Adrenal Gland 0002369 77 928 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.99241 219536 0.977989 0.994524 0.836696 22946 1 76 0.00180161 271 0 9.47154e+07 0.0215967 1.70125e+06 9.52369e+07 8.96165e+06 22968 4.71712e+07 0 0.141293 0.994524 0.832115 9.47154e+07 0.00277591 2.0815e+07 1.68234e+07 2.08285e+07 277 2.0742e+07 1.64722e+07 0.00228772 2.10792e+07 50.4031 0.0178633 0.996639 0 50.0162 GTEX-14H4A-0426-SM-5ZZWO 0 B1 2 pieces; from 30-60% fat 8.4 Heart Heart - Atrial Appendage 0006631 470 535 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994958 155539 0.97975 0.996075 0.84018 21540 1 76 0.00174918 267 0 8.11363e+07 0.0199613 2.22319e+06 8.1456e+07 7.66376e+06 21550 4.04651e+07 0 0.13957 0.996075 0.836882 8.11363e+07 0.00272931 1.769e+07 1.42752e+07 1.77674e+07 262 1.76068e+07 1.29301e+07 0.00223869 1.79329e+07 50.4587 0.0272932 0.997192 0 50.1091 GTEX-14H4A-0526-SM-62LEU 1 B1 2 pieces; both include abundant attached fat/vessels, myocardium (50 and 75%), atherosclerosis 7.9 Blood Vessel Artery - Coronary 0001621 473 532 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987783 174045 0.97744 0.991521 0.852664 22024 1 76 0.00254524 166 0 7.81646e+07 0.0222417 556432 7.8833e+07 5.84896e+06 22042 3.88528e+07 0 0.124776 0.991521 0.845434 7.81646e+07 0.00338975 1.69996e+07 6.0248e+06 1.71107e+07 188 1.70935e+07 1.5349e+07 0.00296591 1.72876e+07 50.2822 0.00705836 0.99526 0 50.1629 GTEX-14H4A-0626-SM-5ZZUT 0 B1 2 pieces 8.4 Heart Heart - Left Ventricle 0006566 481 524 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994687 151440 0.987393 0.995558 0.871896 19308 1 76 0.00168146 267 0 8.27258e+07 0.0123502 3.015e+06 8.3095e+07 7.66668e+06 19316 4.12718e+07 0 0.115498 0.995558 0.868022 8.27258e+07 0.00257246 1.81864e+07 2.08039e+07 1.80382e+07 265 1.79076e+07 1.45026e+07 0.00212657 1.83869e+07 50.6603 0.0362837 0.996428 0 49.7954 GTEX-14H4A-0926-SM-5ZZUU 0 B1 2 pieces 6.8 Muscle Muscle - Skeletal 0011907 490 515 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994938 167597 0.98268 0.996234 0.883591 19103 1 76 0.00167874 203 0 7.6953e+07 0.0171432 852339 7.72439e+07 7.37925e+06 19110 3.83794e+07 0 0.0990892 0.996234 0.880263 7.6953e+07 0.00284503 1.68955e+07 1.17035e+07 1.70918e+07 238 1.70056e+07 1.53858e+07 0.00226113 1.7067e+07 50.0901 0.0110344 0.997529 0 50.2888 GTEX-14H4A-1026-SM-62LDY 0 B1 2 pieces; small attachment of nerve 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 497 508 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988766 127037 0.974424 0.992015 0.814355 22090 1 76 0.00265815 145 0 6.01946e+07 0.025253 295584 6.06791e+07 4.29125e+06 22109 2.99327e+07 0 0.160068 0.992015 0.807853 6.01946e+07 0.00326667 1.32093e+07 5.92289e+06 1.32806e+07 143 1.32902e+07 1.06915e+07 0.00296141 1.33808e+07 50.1699 0.00487127 0.995265 0 50.1346 GTEX-14H4A-1626-SM-5SI69 0 B1 6 pieces 8.7 Esophagus Esophagus - Mucosa 0006920 549 456 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991299 247734 0.975515 0.993423 0.840835 22725 1 76 0.00195361 282 0 1.05614e+08 0.0241631 572481 1.06313e+08 9.81082e+06 22741 5.26023e+07 0 0.13468 0.993423 0.835305 1.05614e+08 0.00290462 2.36035e+07 1.59552e+07 2.37034e+07 289 2.37114e+07 2.22257e+07 0.0024281 2.38147e+07 50.1087 0.00538485 0.995548 0 50.1055 GTEX-14H4A-1726-SM-5ZZUV 1 B1 6 pieces; well trimmed 6.4 Esophagus Esophagus - Muscularis 0004648 553 452 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993779 161281 0.979005 0.995077 0.854824 21272 1 76 0.00183949 209 0 7.51753e+07 0.0206873 1.04467e+06 7.55472e+07 6.56285e+06 21286 3.74728e+07 0 0.124182 0.995077 0.850615 7.51753e+07 0.00299744 1.62664e+07 7.27707e+06 1.64249e+07 214 1.63162e+07 1.32314e+07 0.00241771 1.64676e+07 50.2309 0.013828 0.996375 0 50.2424 GTEX-14H4A-1926-SM-5ZZWN 1 B1 6 pieces; mostly well preserved, mucosa and muscularis 7.7 Colon Colon - Transverse 0001157 532 473 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993837 151902 0.975179 0.995114 0.830805 23313 1 76 0.00186629 210 0 7.68421e+07 0.024553 683016 7.72194e+07 6.93908e+06 23331 3.83043e+07 0 0.144374 0.995114 0.826746 7.68421e+07 0.00287927 1.66284e+07 7.28115e+06 1.67973e+07 209 1.67224e+07 1.32359e+07 0.00237213 1.67939e+07 50.1067 0.00884514 0.996392 0 50.2526 GTEX-14H4A-2426-SM-664OQ 1 B1 6 pieces 8.3 Vagina Vagina 0000996 547 458 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992233 262929 0.973148 0.993013 0.798528 24779 1 76 0.00233041 280 0 1.09169e+08 0.0265561 262703 1.09937e+08 6.95141e+06 24812 5.43709e+07 0 0.17462 0.993013 0.792949 1.09169e+08 0.00312596 2.41819e+07 1.26124e+07 2.43293e+07 296 2.4287e+07 2.11512e+07 0.00272788 2.43118e+07 50.0255 0.00238957 0.993794 0 50.1519 GTEX-14H4A-2526-SM-5YYAY 1 B1 2 pieces; predominantly fibrocollagenous stroma with benign ductal/lobular elements, some fat 6.9 Breast Breast - Mammary Tissue 0008367 551 454 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989786 167158 0.967654 0.991102 0.809455 24790 1 76 0.00262269 201 0 8.52691e+07 0.0320004 904030 8.60347e+07 3.85084e+06 24822 4.24166e+07 0 0.158199 0.991102 0.802252 8.52691e+07 0.00340062 1.86828e+07 9.55994e+06 1.87825e+07 203 1.8709e+07 1.61682e+07 0.00301114 1.88734e+07 50.2188 0.0105077 0.992418 0 50.1331 GTEX-14H4A-5001-SM-AN42I B1 Heart Heart - Left Ventricle 0006566 479 ChIP-Seq GTEX-14ICK-0004-SM-5DU5N B1 Blood Whole Blood 0013756 -172 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-4834 02/16/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14ICK-0004-SM-7DROB B1 Blood Whole Blood 0013756 -172 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14ICK-0006-SM-5NQB5 B1 8.2 Blood Whole Blood 0013756 -172 BP-47123 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2013 LCSET-4907 03/21/2014 TruSeq.v1 RNASEQ 0.989805 733577 0.957124 0.992945 0.829332 18224 1 76 0.00244144 138 0 7.32313e+07 0.0424818 382113 7.37516e+07 9.7807e+06 18233 3.64231e+07 0 0.127792 0.992945 0.823481 7.32313e+07 0.00545521 1.59105e+07 3.54133e+07 1.60584e+07 151 1.60797e+07 1.55226e+07 0.00394356 1.61201e+07 50.0626 0.00518108 0.996084 0 50.2312 GTEX-14ICK-0226-SM-6EU25 1 B1 6 pieces; well trimmed; 5-10% dermal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 663 547 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990554 277396 0.975519 0.992376 0.817599 22776 1 76 0.00406091 186 0 7.97148e+07 0.0242663 573117 8.03272e+07 7.62107e+06 22797 3.96707e+07 0 0.15792 0.992376 0.811366 7.97148e+07 0.0043075 1.75698e+07 9.08015e+06 1.76118e+07 188 1.75623e+07 1.32982e+07 0.00418398 1.77626e+07 50.2835 0.00713478 0.994199 0 50.0597 GTEX-14ICK-0326-SM-6LLIZ 1 B1 2 pieces; 20 & 10% fibrous content 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 665 545 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977364 228962 0.979341 0.98587 0.854092 22211 1 76 0.0022179 377 0 9.84859e+07 0.0203777 389636 9.98974e+07 8.60600e+06 22231 4.86878e+07 0 0.125249 0.98587 0.842024 9.84859e+07 0.00367645 2.14135e+07 1.03333e+07 2.14471e+07 333 2.16857e+07 1.86702e+07 0.00294088 2.1973e+07 50.3291 0.00390036 0.994377 0 50.0391 GTEX-14ICK-0526-SM-6EU26 1 B1 2 pieces; <5% fat 5.7 Nerve Nerve - Tibial 0001323 669 541 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.987092 220041 0.970876 0.989095 0.788085 23023 1 76 0.00406005 150 0 6.89002e+07 0.0288771 325643 6.96598e+07 6.85292e+06 23050 3.42681e+07 0 0.182791 0.989095 0.779491 6.89002e+07 0.00421184 1.51091e+07 6.63668e+06 1.51685e+07 154 1.51196e+07 1.0923e+07 0.0041358 1.52927e+07 50.2847 0.00467476 0.991098 0 50.0981 GTEX-14ICK-1026-SM-6AJA4 3 B1 6 pieces; mucosa autolyzed, muscle intact; 1 piece has no muscularis 6.6 Colon Colon - Transverse 0001157 744 466 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.986909 168657 0.970474 0.989281 0.802505 23600 1 76 0.00327189 169 0 7.85945e+07 0.0230803 418906 7.94461e+07 5.51996e+06 23630 3.88563e+07 0 0.167969 0.989281 0.793903 7.85945e+07 0.0042904 1.74317e+07 1.40922e+07 1.75507e+07 192 1.75926e+07 1.26396e+07 0.00377993 1.75617e+07 49.956 0.00527284 0.991654 0 50.1701 GTEX-14ICK-1126-SM-69LOO 1 B1 6 pieces; up to 40% perimuscular stroma 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 745 465 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99288 198294 0.972735 0.994128 0.773072 23108 1 76 0.00182856 211 0 8.58184e+07 0.0270487 502993 8.63253e+07 4.73538e+06 23143 4.27567e+07 0 0.199663 0.994128 0.768532 8.58184e+07 0.00263957 1.88278e+07 7.71825e+06 1.88764e+07 221 1.88083e+07 1.2907e+07 0.00223356 1.90023e+07 50.2565 0.00582671 0.995376 0 50.0644 GTEX-14ICK-1626-SM-6ETZX 1 B1 2 pieces; scattered atrophic areas 6 Thyroid Thyroid 0002046 709 501 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991738 184771 0.970796 0.993109 0.755328 23944 1 76 0.00408077 138 0 7.29548e+07 0.0288578 278939 7.3461e+07 6.71279e+06 23982 3.63167e+07 0 0.215467 0.993109 0.750123 7.29548e+07 0.0042273 1.60719e+07 7.795e+06 1.6063e+07 154 1.60144e+07 1.10225e+07 0.00415393 1.62199e+07 50.3187 0.0037971 0.99448 0 49.9862 GTEX-14ICK-1726-SM-6AJA5 1 B1 2 pieces 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 699 511 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992112 193686 0.978845 0.994297 0.816714 21841 1 76 0.00183449 167 0 7.5942e+07 0.020888 350591 7.63776e+07 5.63783e+06 21859 3.78221e+07 0 0.162131 0.994297 0.812056 7.5942e+07 0.00269542 1.67421e+07 1.06404e+07 1.67911e+07 197 1.68516e+07 1.39242e+07 0.00226401 1.68398e+07 49.9826 0.00459023 0.996481 0 50.0731 GTEX-14ICK-1826-SM-69LOP 2 B1 2 pieces 6 Prostate Prostate 0002367 702 508 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.990971 228713 0.968943 0.992403 0.770195 24370 1 76 0.00188567 187 0 7.93071e+07 0.0307758 836616 7.99142e+07 4.46097e+06 24402 3.94834e+07 0 0.198748 0.992403 0.764344 7.93071e+07 0.00276587 1.74952e+07 9.97349e+06 1.7572e+07 205 1.74993e+07 1.13022e+07 0.00232514 1.76816e+07 50.2592 0.0104689 0.993836 0 50.1095 GTEX-14ICK-2026-SM-6AJB2 1 B1 7 pieces; prominent submucosal glands comprise 5% to 50%. 8.6 Esophagus Esophagus - Mucosa 0006920 748 462 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99121 270163 0.973477 0.993602 0.812672 20796 1 76 0.00204981 155 0 7.47266e+07 0.0262446 147795 7.52078e+07 5.38986e+06 20814 3.72056e+07 0 0.160805 0.993602 0.807473 7.47266e+07 0.0031494 1.68271e+07 1.30064e+07 1.69769e+07 168 1.69911e+07 1.50449e+07 0.00259828 1.69924e+07 50.0019 0.00196516 0.995994 0 50.2216 GTEX-14ICK-2426-SM-6EU27 1 B1 2 pieces; increased ducts in fibrous stroma consistent with gynecomastoid hyperplasia; fat comprises 15% & 40%. 7.2 Breast Breast - Mammary Tissue 0008367 758 452 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991264 124525 0.978173 0.992542 0.852909 22454 1 76 0.00392782 151 0 6.98015e+07 0.0215476 292184 7.0326e+07 6.65842e+06 22471 3.47397e+07 0 0.125264 0.992542 0.846548 6.98015e+07 0.00410373 1.53738e+07 7.18891e+06 1.54191e+07 157 1.53306e+07 1.43846e+07 0.00401566 1.55528e+07 50.3598 0.00415471 0.99382 0 50.0735 GTEX-14ICK-5007-SM-AN42K B1 Lung Lung 0008952 694 ChIP-Seq GTEX-14ICL-0004-SM-5CV9H B1 Blood Whole Blood 0013756 -117 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-4800 02/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14ICL-0004-SM-7DRNX B1 Blood Whole Blood 0013756 -117 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-14ICL-0006-SM-5SIAB B1 9 Blood Whole Blood 0013756 -117 BP-47123 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2013 LCSET-5174 04/04/2014 TruSeq.v1 RNASEQ 0.990636 625668 0.950359 0.993035 0.760666 20340 1 76 0.00227778 121 0 7.1164e+07 0.0491091 257543 7.16631e+07 6.84465e+06 20354 3.54013e+07 0 0.189693 0.993035 0.755368 7.1164e+07 0.0036011 1.55838e+07 4.71376e+07 1.56668e+07 139 1.57153e+07 1.38274e+07 0.00293785 1.57219e+07 50.0105 0.0035938 0.995435 0 50.1328 GTEX-14ICL-0126-SM-664NG 1 B1 2 pieces, no abnormalities 6.7 Spleen Spleen 0002106 54 1396 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989963 268844 0.967763 0.990771 0.762921 25656 1 76 0.0028522 375 0 1.2309e+08 0.0309845 942266 1.24236e+08 7.64597e+06 25710 6.12207e+07 0 0.204842 0.990771 0.75588 1.2309e+08 0.00370737 2.7241e+07 1.62002e+07 2.74162e+07 341 2.73371e+07 1.73005e+07 0.00327944 2.74182e+07 50.074 0.00758448 0.991579 0 50.1603 GTEX-14ICL-0326-SM-5S2OS 1 B1 6 pieces, no significant atherosis 6.3 Blood Vessel Artery - Aorta 0001496 653 797 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991568 177832 0.977634 0.993352 0.848164 21084 1 76 0.00159346 214 0 8.2643e+07 0.0219393 383850 8.31961e+07 6.2938e+06 21096 4.11241e+07 0 0.12947 0.993352 0.842525 8.2643e+07 0.00242355 1.79009e+07 7.35737e+06 1.79768e+07 220 1.7884e+07 1.59817e+07 0.00200776 1.81412e+07 50.3569 0.0046138 0.995136 0 50.1057 GTEX-14ICL-0426-SM-5RQJ3 1 B1 2 pieces, regressive changes, mild goitre. Focal minute nodule of adherent fat, delineated, 6.1 Thyroid Thyroid 0002046 660 790 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990912 208762 0.96527 0.991894 0.77132 22580 1 76 0.00205225 127 0 5.9027e+07 0.0344739 245840 5.95094e+07 3.05888e+06 22605 2.93617e+07 0 0.193949 0.991894 0.765068 5.9027e+07 0.00288661 1.29178e+07 6.29447e+06 1.29737e+07 144 1.29421e+07 9.12369e+06 0.00246902 1.30099e+07 50.1307 0.00413111 0.992876 0 50.108 GTEX-14ICL-0526-SM-5RQJ6 1 B1 8 pieces, squamous mucosa up to ~0.3mm, ~10-20% thickness 9.3 Esophagus Esophagus - Mucosa 0006920 690 760 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992776 235798 0.980015 0.993743 0.849553 20970 1 76 0.00197373 148 0 6.69132e+07 0.0195905 246944 6.73346e+07 3.19259e+06 20981 3.33274e+07 0 0.130462 0.993743 0.844237 6.69132e+07 0.00273141 1.51537e+07 8.24511e+06 1.52513e+07 158 1.52347e+07 1.40625e+07 0.0023522 1.52368e+07 50.0034 0.00366742 0.99471 0 50.1605 GTEX-14ICL-0626-SM-5ZZUO 1 B1 6 pieces, all target muscularis 7.5 Esophagus Esophagus - Muscularis 0004648 688 762 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995286 134806 0.973364 0.996182 0.826646 22680 1 76 0.00185864 210 0 8.35471e+07 0.026391 728960 8.38673e+07 7.08712e+06 22705 4.16645e+07 0 0.146718 0.996182 0.82349 8.35471e+07 0.00282016 1.80297e+07 7.87933e+06 1.82169e+07 255 1.81017e+07 1.37471e+07 0.00233897 1.82168e+07 50.1585 0.00869182 0.997078 0 50.2583 GTEX-14ICL-0826-SM-5YY9W 2 B1 6 pieces, mucosa variably preserved, score 2 to 3, partially sloughed 6.7 Stomach Stomach 0000945 693 757 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.988561 183798 0.97757 0.989831 0.820921 23984 1 76 0.00261681 415 0 1.04923e+08 0.0217333 875162 1.06000e+08 4.81866e+06 24009 5.22255e+07 0 0.156649 0.989831 0.812573 1.04923e+08 0.00332724 2.36297e+07 6.42208e+07 2.4047e+07 354 2.39679e+07 2.01868e+07 0.00297157 2.38368e+07 49.863 0.00825621 0.991101 0 50.4377 GTEX-14ICL-0926-SM-5S2TU 1 B1 2 pieces (fragmented), ~5% fascia/vascular tissue, rep delineated, good specimen 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 706 744 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.991438 195191 0.975933 0.993466 0.827597 21430 1 76 0.00184133 204 0 7.69182e+07 0.023839 1.36013e+06 7.74241e+07 6.86559e+06 21446 3.82899e+07 0 0.148336 0.993466 0.822189 7.69182e+07 0.00303289 1.69897e+07 9.29234e+06 1.69829e+07 237 1.69012e+07 1.03062e+07 0.00243589 1.72193e+07 50.4661 0.0175672 0.995494 0 49.99 GTEX-14ICL-1126-SM-5S2RE 1 B1 2 pieces, Islets unusually prominent, fairly well-preserved, rep delineated; minimal adherent fat, good specimen 6.3 Pancreas Pancreas 0001150 722 728 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.994111 162601 0.976562 0.995213 0.854859 20886 1 76 0.0018034 102 0 6.07375e+07 0.0232993 151310 6.10296e+07 3.64651e+06 20897 3.02746e+07 0 0.121703 0.995213 0.850767 6.07375e+07 0.0024329 1.37954e+07 1.61954e+07 1.40923e+07 109 1.40451e+07 1.71001e+07 0.0021178 1.39113e+07 49.7607 0.00247929 0.996315 0 50.5324 GTEX-14ICL-1226-SM-5S2RD 3 B1 6 pieces, mucosa largely sloughed, trace residual lamina propria remains 5.7 Colon Colon - Transverse 0001157 734 716 BP-48651 RNA Extraction from Paxgene-derived Lysate Plate Based 01/24/2014 LCSET-4988 04/01/2014 TruSeq.v1 RNASEQ 0.992339 127953 0.974653 0.993362 0.822501 21418 1 76 0.00165219 139 0 5.60588e+07 0.0250941 386242 5.64334e+07 3.21618e+06 21437 2.79114e+07 0 0.152152 0.993362 0.817041 5.60588e+07 0.00244654 1.22304e+07 5.12379e+06 1.23356e+07 147 1.22539e+07 9.04822e+06 0.00204896 1.23701e+07 50.2358 0.00684421 0.994384 0 50.2141 GTEX-14ICL-1626-SM-5YYAO 0 B1 6 pieces, trace adherent dermal fat up to ~1mm, delineated; squamous epithelium is ~50 microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 764 686 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989181 312148 0.973744 0.990701 0.826131 23403 1 76 0.00254989 389 0 1.04343e+08 0.0260344 649512 1.05323e+08 4.63814e+06 23426 5.1918e+07 0 0.147613 0.990701 0.818449 1.04343e+08 0.00334503 2.30381e+07 1.49117e+07 2.31163e+07 344 2.30542e+07 1.87312e+07 0.00294685 2.32644e+07 50.2269 0.00616687 0.992221 0 50.0848 GTEX-14ICL-1826-SM-5RQIY 0 B1 2 pieces, no significant atherosis, clean specimens 6 Blood Vessel Artery - Tibial 0007610 859 591 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990903 150887 0.973334 0.991596 0.838454 20766 1 76 0.00202761 159 0 7.0806e+07 0.0263391 342578 7.14061e+07 3.43555e+06 20775 3.52249e+07 0 0.13488 0.991596 0.831407 7.0806e+07 0.00280369 1.50529e+07 6.2575e+06 1.51313e+07 173 1.50408e+07 1.34094e+07 0.00241538 1.51975e+07 50.259 0.0047976 0.99229 0 50.1298 GTEX-14ICL-1926-SM-5RQIZ 0 B1 2 pieces, ~10-15% interstitial fat/vascular elements, rep delineated 8.4 Muscle Muscle - Skeletal 0011907 860 590 BP-48576 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.994622 155273 0.9817 0.995427 0.87762 18748 1 76 0.0016781 176 0 7.0779e+07 0.0180533 404035 7.11042e+07 3.36734e+06 18761 3.52892e+07 0 0.10408 0.995427 0.873607 7.0779e+07 0.00225027 1.53852e+07 5.50374e+06 1.54665e+07 179 1.54595e+07 1.56332e+07 0.00196395 1.54439e+07 49.9746 0.00568229 0.996232 0 50.1317 GTEX-14ICL-2026-SM-62LDN 0 B1 2 pieces, minimal fascia/vascular elements, good specimen 8.9 Adipose Tissue Adipose - Subcutaneous 0002190 860 590 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986002 196334 0.978154 0.989758 0.793328 21631 1 76 0.00279343 167 0 7.36521e+07 0.0215657 506474 7.44142e+07 5.17920e+06 21656 3.6582e+07 0 0.184826 0.989758 0.785203 7.36521e+07 0.00366112 1.62558e+07 8.94209e+06 1.63433e+07 188 1.63164e+07 1.04137e+07 0.00322563 1.65364e+07 50.3347 0.00680615 0.993516 0 50.1343 GTEX-14JFF-0002-SM-DINCH C1 Blood Whole Blood 0013756 699 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-14JFF-0002-SM-DLIOQ C1 Blood Whole Blood 0013756 699 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-14JFF-0005-SM-7P8RF C1 7.3 Blood Whole Blood 0013756 699 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.887468 777130 0.95485 0.928739 0.778101 20278 1 76 0.00420686 105 0 7.69336e+07 0.0435466 125585 8.28367e+07 1.22747e+07 20285 3.65947e+07 0 0.176749 0.928739 0.722652 7.69336e+07 0.0120604 1.68754e+07 1.20969e+08 1.64542e+07 110 1.83601e+07 1.81322e+07 0.00795911 1.84039e+07 50.0596 0.00151606 0.970009 0 49.3681 GTEX-14JFF-0011-R10a-SM-AHZNL C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 739 ChIP-Seq GTEX-14JFF-0011-R11a-SM-5ZZV6 C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 739 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.994197 1.11527e+06 0.935686 0.995506 0.832034 21137 1 76 0.00197916 198 0 6.89747e+07 0.0639663 4.15626e+06 6.92861e+07 6.0691e+06 21150 3.43767e+07 0 0.103652 0.995506 0.828295 6.89747e+07 0.00314289 1.47069e+07 3.53035e+07 1.48739e+07 211 1.47807e+07 7.92925e+06 0.00256026 1.49152e+07 50.2263 0.059987 0.996815 0 50.2823 GTEX-14JFF-0011-R4a-SM-5ZZV5 C1, A1 6.3 Brain Brain - Amygdala 0001876 739 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.991563 1.34259e+06 0.928637 0.993337 0.831789 20536 1 76 0.00210254 200 0 6.76616e+07 0.0711611 9.56079e+06 6.81154e+07 5.99386e+06 20544 3.37141e+07 0 0.0968479 0.993337 0.826248 6.76616e+07 0.00354218 1.43327e+07 4.75393e+07 1.46044e+07 231 1.4306e+07 5.261e+06 0.00282107 1.47622e+07 50.7846 0.140362 0.995112 0 50.4695 GTEX-14JFF-0426-SM-6LLHR 0 C1 2 pieces, adherent partial rims of fat, delineated, up to ~1mm 5.9 Nerve Nerve - Tibial 0001323 809 493 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977927 163031 0.963087 0.986224 0.728321 24334 1 76 0.00257795 159 0 7.51173e+07 0.0366598 184301 7.61665e+07 6.49824e+06 24374 3.71363e+07 0 0.234766 0.986224 0.718288 7.51173e+07 0.00394489 1.63908e+07 7.38752e+06 1.63441e+07 161 1.65715e+07 1.07978e+07 0.00325567 1.67659e+07 50.2914 0.00241971 0.994522 0 49.9287 GTEX-14JFF-0526-SM-62LFL 0 C1 2 pieces, extensive dystrophic calcification, Monckeberg sclerosis, minimal atherosis 6.2 Blood Vessel Artery - Tibial 0007610 815 488 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986029 1.19821e+06 0.972326 0.989549 0.816156 29844 1 76 0.00285566 742 0 4.73483e+08 0.0272907 1.21156e+06 4.78484e+08 3.42713e+07 29949 2.35181e+08 0 0.15617 0.989549 0.807627 4.73483e+08 0.00355129 1.03048e+08 5.11498e+07 1.03606e+08 595 1.03439e+08 8.17943e+07 0.00320224 1.048e+08 50.3268 0.00253208 0.993069 0 50.1351 GTEX-14JFF-0626-SM-5ZZVT 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50-60 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 821 482 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99324 160862 0.971411 0.99452 0.755364 24029 1 76 0.00217215 167 0 7.62039e+07 0.0283702 417202 7.66238e+07 7.16552e+06 24061 3.7969e+07 0 0.216047 0.99452 0.751225 7.62039e+07 0.00323655 1.67808e+07 8.57977e+06 1.69057e+07 169 1.6874e+07 1.23531e+07 0.00270367 1.69084e+07 50.0509 0.00544481 0.9958 0 50.1854 GTEX-14JFF-2826-SM-6871Q 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cerebellum 0002037 918 399 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990394 730616 0.934847 0.991178 0.716513 24482 1 76 0.00226905 269 0 1.06465e+08 0.0648839 2.73576e+06 1.07412e+08 5.80258e+06 24516 5.30311e+07 0 0.218334 0.991178 0.710192 1.06465e+08 0.0028046 2.26409e+07 3.5235e+07 2.28999e+07 318 2.28132e+07 9.81509e+06 0.00253661 2.28114e+07 49.9981 0.0254697 0.991963 0 50.2843 GTEX-14JFF-2926-SM-CYKNZ 1 C1 4 pieces, no abnormalities 7.6 Brain Brain - Cortex 0001870 920 397 BP-50127 RNA Extraction from Paxgene-derived Lysate Plate Based 03/04/2014 RIP-Seq GTEX-14JG1-0002-SM-5HX8M C1 Blood Whole Blood 0013756 688 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-4932 03/10/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14JG1-0002-SM-7DRNT C1 Blood Whole Blood 0013756 688 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14JG1-0006-SM-7SB6P C1 9 Blood Whole Blood 0013756 688 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.969146 474479 0.96939 0.971294 0.732292 19912 1 76 0.00278228 101 0 8.97296e+07 0.0298266 161993 9.23815e+07 1.03756e+07 19934 4.4649e+07 0 0.237098 0.971294 0.711271 8.97296e+07 0.00426866 2.07021e+07 1.24375e+08 2.08545e+07 134 2.08843e+07 2.08855e+07 0.00352383 2.08822e+07 49.9975 0.00175352 0.973442 0 50.1834 GTEX-14JG1-0011-R10a-SM-AHZNJ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 708 ChIP-Seq GTEX-14JG1-0011-R11a-SM-62LEE C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 708 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.987243 1.07654e+06 0.943092 0.991185 0.841905 22036 1 76 0.00281297 204 0 7.52108e+07 0.0564475 3.29215e+06 7.58797e+07 5.8226e+06 22046 3.73728e+07 0 0.101187 0.991185 0.834483 7.52108e+07 0.00350458 1.60915e+07 3.15211e+07 1.63281e+07 220 1.63216e+07 1.07159e+07 0.0031574 1.6385e+07 50.0969 0.0433864 0.995127 0 50.3649 GTEX-14JG1-0011-R2a-SM-5ZZVE C1, A1 7.2 Brain Brain - Substantia nigra 0002038 708 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993994 437476 0.959662 0.995046 0.824294 23578 1 76 0.00217309 276 0 7.87066e+07 0.0400304 3.66136e+06 7.90985e+07 7.17689e+06 23603 3.92449e+07 0 0.135368 0.995046 0.82021 7.87066e+07 0.00313571 1.73141e+07 1.5917e+07 1.7478e+07 262 1.73306e+07 9.58608e+06 0.0026539 1.75388e+07 50.2985 0.0462886 0.996099 0 50.2356 GTEX-14JG1-0011-R3a-SM-62LEC C1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 708 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986792 2.76164e+06 0.947289 0.99066 0.855182 24686 1 76 0.00285779 526 0 1.95376e+08 0.052307 1.18128e+07 1.97218e+08 1.45196e+07 24706 9.70885e+07 0 0.092107 0.99066 0.847195 1.95376e+08 0.00358546 4.16173e+07 8.69286e+07 4.25816e+07 493 4.22699e+07 2.58662e+07 0.0032202 4.26771e+07 50.2397 0.059897 0.994529 0 50.5727 GTEX-14JG1-0011-R4b-SM-62LEB C1, A1 6.6 Brain Brain - Amygdala 0001876 708 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986897 1.08068e+06 0.9452 0.990639 0.860888 21538 1 76 0.00283208 205 0 7.40445e+07 0.0544443 3.83514e+06 7.47442e+07 5.18522e+06 21549 3.67925e+07 0 0.0843118 0.990639 0.852829 7.40445e+07 0.00364233 1.58685e+07 3.20004e+07 1.60678e+07 218 1.59632e+07 1.02516e+07 0.00323568 1.6257e+07 50.4559 0.0513101 0.994381 0 50.3121 GTEX-14JG1-0011-R5a-SM-62LED C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 708 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988961 1.16196e+06 0.941051 0.992776 0.851561 21536 1 76 0.00283107 204 0 7.25613e+07 0.0586351 4.20261e+06 7.30893e+07 5.10653e+06 21547 3.60655e+07 0 0.0894904 0.992776 0.845409 7.25613e+07 0.0035394 1.54163e+07 3.52918e+07 1.57331e+07 218 1.56239e+07 8.74228e+06 0.00318387 1.58059e+07 50.2894 0.0574996 0.996591 0 50.5085 GTEX-14JG1-0011-R6b-SM-5YYAU C1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 708 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990702 1.24615e+06 0.940386 0.992444 0.795577 24899 1 76 0.00280713 269 0 1.00331e+08 0.059175 4.70691e+06 1.01095e+08 4.68519e+06 24921 4.9942e+07 0 0.144809 0.992444 0.789566 1.00331e+08 0.00369634 2.13851e+07 4.38712e+07 2.14929e+07 299 2.15387e+07 1.17012e+07 0.00325096 2.15294e+07 49.9892 0.0465594 0.994186 0 50.1257 GTEX-14JG1-0011-R7b-SM-5YYAV C1, A1 8.5 Brain Brain - Putamen (basal ganglia) 0001874 708 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.99143 887316 0.953926 0.992594 0.801161 24167 1 76 0.00288849 269 0 1.02865e+08 0.0457333 5.62636e+06 1.03633e+08 4.63634e+06 24188 5.12336e+07 0 0.152766 0.992594 0.795227 1.02865e+08 0.0034287 2.21317e+07 4.16957e+07 2.23903e+07 324 2.2179e+07 1.0632e+07 0.00315828 2.24818e+07 50.339 0.0542913 0.993758 0 50.2905 GTEX-14JG1-0126-SM-5ZZUP 1 C1 2 pieces; <5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 933 396 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99533 152970 0.98446 0.996367 0.876896 19030 1 76 0.00195317 200 0 8.76425e+07 0.0153212 853717 8.79621e+07 8.21777e+06 19039 4.37197e+07 0 0.107564 0.996367 0.87371 8.76425e+07 0.00293131 1.91047e+07 1.08916e+07 1.90469e+07 251 1.90242e+07 1.90997e+07 0.00244173 1.92052e+07 50.2367 0.00970551 0.997403 0 49.9243 GTEX-14JG1-0126-SM-CYKQB 1 C1 2 pieces; <5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 933 396 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 RIP-Seq GTEX-14JG1-0326-SM-62LDO 1 C1 2 pieces; no plaques; well trimmed 6 Blood Vessel Artery - Tibial 0007610 936 394 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.984933 176795 0.971271 0.989576 0.797196 21534 1 76 0.00293571 145 0 7.07162e+07 0.0283942 502367 7.14611e+07 4.84217e+06 21560 3.50815e+07 0 0.174075 0.989576 0.788886 7.07162e+07 0.00419932 1.52225e+07 6.05082e+06 1.53277e+07 159 1.53384e+07 1.17657e+07 0.00356455 1.55105e+07 50.2789 0.00702994 0.994219 0 50.1721 GTEX-14JG1-0426-SM-6ETZZ 0 C1 6 pieces; up to 10% dermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 938 392 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990547 190111 0.972726 0.99201 0.790069 23191 1 76 0.00428436 176 0 7.5534e+07 0.0270523 301674 7.61424e+07 7.12092e+06 23227 3.76135e+07 0 0.182657 0.99201 0.783756 7.5534e+07 0.00440495 1.64828e+07 8.85482e+06 1.65201e+07 159 1.64908e+07 1.27805e+07 0.00434456 1.66204e+07 50.1957 0.00396197 0.993472 0 50.0565 GTEX-14JG1-0526-SM-6LLHW 1 C1 4 fragmented pieces; 10% fibrous content 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 941 390 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.974146 209888 0.972337 0.982464 0.803086 23797 1 76 0.00272695 212 0 8.83416e+07 0.0273455 733405 8.99184e+07 7.81027e+06 23830 4.36618e+07 0 0.169251 0.982464 0.789002 8.83416e+07 0.00411308 1.93286e+07 1.00015e+07 1.93411e+07 244 1.95992e+07 1.36183e+07 0.00341415 1.97669e+07 50.213 0.00815634 0.990781 0 50.0161 GTEX-14JG1-0826-SM-5ZZWR 1 C1 2 pieces; 20% & 5% external fat 7.3 Heart Heart - Atrial Appendage 0006631 948 384 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994088 172773 0.978148 0.995281 0.847223 21679 1 76 0.00205555 158 0 7.6316e+07 0.0215361 1.06008e+06 7.66778e+07 6.70786e+06 21694 3.80443e+07 0 0.130925 0.995281 0.843226 7.6316e+07 0.00319741 1.65642e+07 7.21268e+06 1.66879e+07 182 1.66397e+07 1.46978e+07 0.0026258 1.66981e+07 50.0875 0.0138251 0.996475 0 50.1861 GTEX-14JG1-0926-SM-5YY8W 1 C1 2 pieces; emphysema 6.7 Lung Lung 0008952 946 387 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.989669 162158 0.976244 0.990883 0.753495 23166 1 76 0.00303649 154 0 7.7683e+07 0.0233047 330196 7.83978e+07 3.39248e+06 23194 3.86376e+07 0 0.222748 0.990883 0.746626 7.7683e+07 0.00376739 1.72778e+07 6.97472e+06 1.74009e+07 169 1.73787e+07 1.18777e+07 0.00340149 1.73916e+07 50.0186 0.0042118 0.992097 0 50.1774 GTEX-14JG1-1026-SM-6ETZY 1 C1 2 pieces; ~4 sq mm recent hemorrhage in 1 piece [marked]; lesser amount in other piece 6.9 Heart Heart - Left Ventricle 0006566 950 383 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992186 141540 0.981221 0.99356 0.871338 20469 1 76 0.00431368 195 0 7.55616e+07 0.0186242 3.72965e+06 7.60513e+07 7.19227e+06 20476 3.76517e+07 0 0.109883 0.99356 0.865727 7.55616e+07 0.00433557 1.68174e+07 9.29930e+06 1.69415e+07 210 1.68849e+07 1.05585e+07 0.00432461 1.69765e+07 50.1353 0.0490412 0.994934 0 50.1838 GTEX-14JG1-1026-SM-CYKOG 1 C1 2 pieces; ~4 sq mm recent hemorrhage in 1 piece [marked]; lesser amount in other piece 6.9 Heart Heart - Left Ventricle 0006566 950 383 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 RIP-Seq GTEX-14JG1-1526-SM-5YY9X 0 C1 6 pieces; up to 6 hair follicles per piece; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 959 377 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304,LCSET-5806 06/20/2014 TruSeq.v1 RNASEQ 0.990127 283613 0.972911 0.992538 0.7914 26569 1 76 0.00238849 386 0 1.47759e+08 0.026834 973277 1.4887e+08 1.52561e+07 26621 7.34952e+07 0 0.181511 0.992538 0.785495 1.47759e+08 0.00368531 3.25229e+07 1.90884e+07 3.26079e+07 387 3.25413e+07 2.39747e+07 0.00303533 3.29258e+07 50.2937 0.00653778 0.99495 0 50.0652 GTEX-14JG1-1626-SM-664NH 1 C1 2 pieces; 1 mm focal hemorrhage in 1 piece [marked]; venous congestion 7.2 Liver Liver 0001114 961 375 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992704 208807 0.973894 0.993413 0.829449 22009 1 76 0.00247789 269 0 9.40964e+07 0.0259379 881837 9.47203e+07 5.95024e+06 22034 4.68844e+07 0 0.144446 0.993413 0.823985 9.40964e+07 0.00317772 2.04909e+07 1.34777e+07 2.05266e+07 264 2.04418e+07 1.72121e+07 0.00282756 2.06363e+07 50.2367 0.00930991 0.994122 0 50.0435 GTEX-14JG1-1826-SM-5YY9Y 1 C1 6 pieces; 0.5 mm submucosal gland in 1 [marked] 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 966 372 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.988923 181658 0.965939 0.990171 0.772114 23927 1 76 0.00291191 206 0 8.7557e+07 0.0338592 1.07947e+06 8.84261e+07 4.06476e+06 23963 4.35327e+07 0 0.193825 0.990171 0.764524 8.7557e+07 0.00377265 1.90409e+07 8.21382e+06 1.91657e+07 220 1.90981e+07 1.15032e+07 0.00334174 1.92157e+07 50.1535 0.0122076 0.991419 0 50.1633 GTEX-14JG1-2926-SM-686ZK 2 C1 6 fragmented pieces 7.2 Brain Brain - Cerebellum 0002037 988 361 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990283 626088 0.935198 0.990981 0.695 24540 1 76 0.00239477 201 0 8.91175e+07 0.0644176 1.01266e+06 8.99286e+07 4.69511e+06 24574 4.43713e+07 0 0.240198 0.990981 0.688731 8.91175e+07 0.00298293 1.90382e+07 2.63007e+07 1.92182e+07 220 1.91554e+07 1.0709e+07 0.00268864 1.91657e+07 50.0135 0.0112607 0.991678 0 50.2352 GTEX-14JG1-3026-SM-5YYAA 2 C1 4 pieces 6.4 Brain Brain - Cortex 0001870 989 361 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992536 384249 0.963156 0.99376 0.828946 24215 1 76 0.00275119 269 0 9.75926e+07 0.0364384 2.90102e+06 9.82054e+07 4.57996e+06 24234 4.86057e+07 0 0.13421 0.99376 0.823774 9.75926e+07 0.0034107 2.12644e+07 2.1504e+07 2.1533e+07 311 2.14086e+07 1.19088e+07 0.00308054 2.14975e+07 50.1036 0.0295403 0.994984 0 50.3139 GTEX-14JG1-3126-SM-69LOQ 2 C1 1 piece; only anterior portion 7.1 Pituitary Pituitary 0000007 989 361 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992547 412054 0.958714 0.993819 0.746984 26052 1 76 0.00205769 203 0 8.93501e+07 0.0409956 1.02801e+06 8.99059e+07 5.49687e+06 26102 4.45213e+07 0 0.211729 0.993819 0.742367 8.93501e+07 0.00282567 1.9495e+07 1.41846e+07 1.95532e+07 249 1.95379e+07 1.26964e+07 0.00244119 1.96254e+07 50.1118 0.0114342 0.995091 0 50.0745 GTEX-14JG6-0004-SM-5HX8A B1 Blood Whole Blood 0013756 -112 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-4932 03/10/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14JG6-0004-SM-7DRNR B1 Blood Whole Blood 0013756 -112 BP-47299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/16/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14JG6-0005-SM-9JGFV B1 9.6 Blood Whole Blood 0013756 -112 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.984938 381755 0.962538 0.986637 0.785229 20378 1 76 0.00478228 93 0 6.23083e+07 0.0369553 105412 6.31522e+07 8.72791e+06 20389 3.10201e+07 0 0.177308 0.986637 0.774736 6.23083e+07 0.00454461 1.39351e+07 4.94853e+07 1.40876e+07 110 1.4108e+07 1.34239e+07 0.00466365 1.40178e+07 49.8397 0.00166917 0.988336 0 50.2721 GTEX-14JG6-0126-SM-68726 0 B1 2 pieces; small attachment of fat 7.9 Adrenal Gland Adrenal Gland 0002369 91 676 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993285 306778 0.977698 0.993939 0.842103 22708 1 76 0.00182942 374 0 1.21543e+08 0.0218929 1.66882e+06 1.22285e+08 6.9476e+06 22733 6.05927e+07 0 0.135595 0.993939 0.836999 1.21543e+08 0.00231608 2.67412e+07 1.77831e+07 2.67632e+07 338 2.66447e+07 2.1217e+07 0.00207259 2.69248e+07 50.2615 0.0136471 0.994593 0 50.0206 GTEX-14JG6-0226-SM-6872A 0 B1 2 pieces 6.2 Spleen Spleen 0002106 93 674 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986617 229910 0.96046 0.987271 0.769674 23831 1 76 0.00256344 157 0 7.46721e+07 0.0384399 239145 7.56348e+07 4.27026e+06 23860 3.71488e+07 0 0.190786 0.987271 0.759877 7.46721e+07 0.00314155 1.637e+07 1.18286e+07 1.64334e+07 175 1.63627e+07 1.14245e+07 0.0028523 1.64905e+07 50.1945 0.00316184 0.987925 0 50.0966 GTEX-14JG6-0326-SM-6AJBT 0 B1 2 pieces; some atelectasis, numerous intra-alveolar pigmented macrophages 7.3 Lung Lung 0008952 94 673 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99201 162724 0.974583 0.994038 0.808583 23827 1 76 0.00210162 208 0 8.23118e+07 0.0250478 275690 8.28054e+07 5.96734e+06 23863 4.09934e+07 0 0.166 0.994038 0.803762 8.23118e+07 0.00286011 1.82388e+07 7.90002e+06 1.83978e+07 221 1.83727e+07 1.52372e+07 0.00248009 1.84245e+07 50.0704 0.00332937 0.996067 0 50.2171 GTEX-14JG6-0426-SM-68715 1 B1 2 pieces; well preserved, islets well visualized, focal acute pancreatitis 7.2 Pancreas Pancreas 0001150 96 671 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988877 384818 0.976292 0.989896 0.858072 21484 1 76 0.0022769 157 0 1.00558e+08 0.0232763 176811 1.01585e+08 5.39207e+06 21502 5.00971e+07 0 0.11822 0.989896 0.849402 1.00558e+08 0.00286309 2.3078e+07 2.6552e+07 2.34014e+07 171 2.32671e+07 2.92273e+07 0.0025697 2.33197e+07 50.0564 0.00174052 0.990914 0 50.3478 GTEX-14JG6-0526-SM-6LLIH 0 B1 2 pieces 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 97 670 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979483 182892 0.977914 0.987842 0.854088 22738 1 76 0.00227314 273 0 8.93186e+07 0.0217975 724667 9.04179e+07 7.14727e+06 22758 4.42e+07 0 0.123826 0.987842 0.843704 8.93186e+07 0.00372316 1.95064e+07 8.5209e+06 1.95525e+07 295 1.98088e+07 1.55025e+07 0.00299202 1.9958e+07 50.1876 0.00801464 0.996201 0 50.059 GTEX-14JG6-0626-SM-68716 0 B1 2 pieces 7.7 Ovary Ovary 0000992 98 669 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.99301 257920 0.96951 0.993593 0.789335 23726 1 76 0.00191576 210 0 9.12278e+07 0.0302057 104869 9.18161e+07 4.78981e+06 23762 4.54704e+07 0 0.180176 0.993593 0.784277 9.12278e+07 0.00239024 2.01416e+07 9.75496e+06 2.02604e+07 234 2.01991e+07 1.76429e+07 0.00215286 2.02575e+07 50.0722 0.00114216 0.994176 0 50.147 GTEX-14JG6-0726-SM-69LQH 0 B1 6 pieces; chronic inflammation 7.6 Vagina Vagina 0000996 100 667 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993858 156723 0.97727 0.994941 0.82314 22193 1 76 0.00178247 166 0 7.81394e+07 0.0224966 182332 7.85368e+07 4.94992e+06 22210 3.89607e+07 0 0.15413 0.994941 0.818976 7.81394e+07 0.00248179 1.75415e+07 9.08183e+06 1.76557e+07 196 1.76217e+07 1.54127e+07 0.00213175 1.76575e+07 50.0508 0.00232161 0.996023 0 50.1622 GTEX-14JG6-0826-SM-6AJB9 0 B1 2 pieces; myometrium only in this section 8.4 Uterus Uterus 0000995 103 664 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992263 138573 0.970886 0.994507 0.802579 22137 1 76 0.00196735 144 0 6.48849e+07 0.028745 103715 6.52433e+07 4.41456e+06 22159 3.23064e+07 0 0.168306 0.994507 0.798171 6.48849e+07 0.00281606 1.40961e+07 4.86669e+06 1.42101e+07 149 1.42068e+07 1.18029e+07 0.00239075 1.42354e+07 50.0503 0.00158967 0.996751 0 50.2013 GTEX-14JG6-0926-SM-6871Y 0 B1 6 pieces; squamous mucosa up to 376 microns, well dissected 9.8 Esophagus Esophagus - Mucosa 0006920 111 656 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992109 293411 0.977319 0.992894 0.83469 23023 1 76 0.00189404 281 0 1.10426e+08 0.0223592 437524 1.11217e+08 6.3026e+06 23050 5.50564e+07 0 0.142629 0.992894 0.828759 1.10426e+08 0.0024726 2.49108e+07 1.59094e+07 2.51015e+07 311 2.50329e+07 2.29787e+07 0.00218309 2.50644e+07 50.0314 0.00393398 0.99368 0 50.1906 GTEX-14JG6-1026-SM-6LLIF 0 B1 6 pieces; predominantly well trimmed 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 109 658 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978639 197327 0.972254 0.986901 0.814626 24081 1 76 0.00228463 280 0 9.8167e+07 0.0274346 466619 9.94699e+07 8.5909e+06 24114 4.85338e+07 0 0.157628 0.986901 0.803955 9.8167e+07 0.00361689 2.12776e+07 8.31851e+06 2.12374e+07 310 2.14692e+07 1.69658e+07 0.00294518 2.18183e+07 50.4033 0.00469106 0.995163 0 49.9528 GTEX-14JG6-1226-SM-664O6 1 B1 6 pieces; five are full thickness, one with mucosa/submucosa only 6 Stomach Stomach 0000945 116 651 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.986572 143660 0.980309 0.987584 0.850275 22415 1 76 0.00224991 297 0 7.74601e+07 0.0194096 441291 7.84339e+07 4.88427e+06 22437 3.85838e+07 0 0.130034 0.987584 0.839718 7.74601e+07 0.00312128 1.76716e+07 6.99127e+07 1.79637e+07 216 1.79158e+07 2.04606e+07 0.00268515 1.77963e+07 49.8327 0.00562628 0.988596 0 50.4099 GTEX-14JG6-1326-SM-9OSXU 1 B1 2 pieces; focal cystic change, fibrosis, and multinucleated giant cells 7.8 Thyroid Thyroid 0002046 133 634 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990646 292428 0.966792 0.993045 0.764566 25436 1 76 0.00274423 276 0 1.02698e+08 0.0324716 249008 1.03417e+08 1.02015e+07 25481 5.10908e+07 0 0.202226 0.993045 0.759249 1.02698e+08 0.00391534 2.24438e+07 1.1897e+07 2.26409e+07 272 2.2727e+07 1.58872e+07 0.00332837 2.25858e+07 49.8441 0.0024078 0.995445 0 50.2187 GTEX-14JG6-1426-SM-9WG7C 0 B1 6 pieces; well trimmed 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 135 632 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989187 263494 0.971104 0.991948 0.795877 25031 1 76 0.00245478 288 0 1.00067e+08 0.0286428 658258 1.00879e+08 7.45849e+06 25065 4.97969e+07 0 0.175226 0.991948 0.789469 1.00067e+08 0.00350158 2.18814e+07 1.43305e+07 2.20978e+07 294 2.21468e+07 1.66458e+07 0.00297672 2.20965e+07 49.9432 0.00652524 0.994709 0 50.246 GTEX-14JG6-1626-SM-5YYBC 1 B1 6 pieces; predominantly muscularis with some attached fat and residual mucosa 6.6 Colon Colon - Sigmoid 0001159 154 613 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992528 196849 0.972335 0.993558 0.803993 22973 1 76 0.00245535 279 0 9.86692e+07 0.0274396 598772 9.93089e+07 4.25968e+06 22992 4.91375e+07 0 0.168342 0.993558 0.798814 9.86692e+07 0.00308704 2.12831e+07 9.71573e+06 2.15455e+07 305 2.1387e+07 1.52652e+07 0.00277087 2.15427e+07 50.1814 0.00602939 0.994588 0 50.3063 GTEX-14JG6-1726-SM-69LPL 1 B1 6 pieces; all with mucosa/submucosa/muscularis 7.2 Colon Colon - Transverse 0001157 156 611 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993817 167932 0.973464 0.995053 0.801467 23385 1 76 0.00185107 169 0 7.23413e+07 0.026044 575452 7.27009e+07 4.46809e+06 23416 3.60491e+07 0 0.171998 0.995053 0.797502 7.23413e+07 0.00259382 1.60089e+07 8.37146e+06 1.60738e+07 187 1.59832e+07 1.13609e+07 0.00222198 1.61807e+07 50.307 0.00791533 0.996289 0 50.1011 GTEX-14JG6-1926-SM-6LLIG 1 B1 2 pieces; both include ~15% internal fat 6.5 Nerve Nerve - Tibial 0001323 270 497 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975897 182502 0.967414 0.98451 0.773396 24267 1 76 0.0024541 189 0 8.52532e+07 0.0322712 225578 8.65946e+07 7.56214e+06 24306 4.21303e+07 0 0.194018 0.98451 0.761416 8.52532e+07 0.00387312 1.86267e+07 7.86632e+06 1.86157e+07 198 1.88666e+07 1.43686e+07 0.0031574 1.90916e+07 50.2964 0.00260499 0.993123 0 49.9851 GTEX-14JG6-2026-SM-6EU2E 1 B1 2 pieces; no lesions 8.1 Blood Vessel Artery - Tibial 0007610 280 487 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991015 115707 0.974139 0.992478 0.837625 21315 1 76 0.00405932 139 0 6.80378e+07 0.0254181 156216 6.85534e+07 6.63387e+06 21328 3.38735e+07 0 0.136515 0.992478 0.831324 6.80378e+07 0.0040769 1.46628e+07 4.87006e+06 1.47409e+07 145 1.46950e+07 1.35193e+07 0.0040681 1.48064e+07 50.1887 0.00227875 0.993942 0 50.1328 GTEX-14JG6-2126-SM-6EU2F 0 B1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 281 486 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.993128 185403 0.982871 0.994456 0.883442 19009 1 76 0.00380632 141 0 7.02592e+07 0.0169083 314597 7.06509e+07 6.77888e+06 19018 3.50167e+07 0 0.0994286 0.994456 0.878544 7.02592e+07 0.00379659 1.54628e+07 8.46773e+06 1.55267e+07 165 1.54789e+07 1.44509e+07 0.00380146 1.56017e+07 50.1976 0.00445284 0.995784 0 50.1031 GTEX-14JG6-2226-SM-6EU2G 1 B1 6 pieces; mostly well trimmed with up to 10% fat (predominantly internal), epidermis measures 52 microns, detached fragment of skeletal muscle 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 280 487 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990852 138651 0.968812 0.992208 0.773282 23692 1 76 0.00411433 168 0 7.06304e+07 0.030984 374679 7.11851e+07 6.88334e+06 23720 3.51576e+07 0 0.19553 0.992208 0.767257 7.06304e+07 0.00419408 1.54433e+07 7.53337e+06 1.5483e+07 156 1.54138e+07 1.07861e+07 0.00415415 1.56096e+07 50.3156 0.00526345 0.993564 0 50.0641 GTEX-14JG6-2326-SM-6LLH3 1 B1 2 pieces; fat with small portion of nerve and vessel wall 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 284 483 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978447 185809 0.974513 0.986517 0.82741 23654 1 76 0.00238313 279 0 9.15376e+07 0.0251489 566567 9.27887e+07 8.05863e+06 23681 4.52657e+07 0 0.147103 0.986517 0.816254 9.15376e+07 0.00377811 1.999e+07 9.13183e+06 1.99288e+07 273 2.01546e+07 1.58548e+07 0.00307491 2.04724e+07 50.3912 0.00610599 0.994587 0 49.9234 GTEX-14JG6-5001-SM-AN42H B1 Lung Lung 0008952 96 ChIP-Seq GTEX-14JG6-5013-SM-AN42G B1 Muscle Muscle - Skeletal 0011907 280 ChIP-Seq GTEX-14JIY-0004-SM-5HX9Y B1 Blood Whole Blood 0013756 733 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-4932 03/10/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14JIY-0004-SM-7DRNU B1 Blood Whole Blood 0013756 733 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-6341,LCSET-6909 03/06/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14JIY-0005-SM-7MXVF B1 7.9 Blood Whole Blood 0013756 733 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.949109 183715 0.987711 0.958647 0.807048 17369 1 76 0.00325091 79 0 7.64223e+07 0.0109838 187011 7.97189e+07 1.31994e+07 17372 3.77415e+07 0 0.180663 0.958647 0.773674 7.64223e+07 0.00460693 1.82355e+07 1.436e+08 1.82551e+07 117 1.85882e+07 2.1753e+07 0.00392218 1.86694e+07 50.109 0.00234588 0.968185 0 50.0269 GTEX-14JIY-0011-R10a-SM-6AJAO B1, A1 8.6 Brain Brain - Frontal Cortex (BA9) 0009834 796 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991118 732647 0.952266 0.993432 0.825466 23069 1 76 0.00208828 162 0 7.08127e+07 0.0471926 1.56699e+06 7.12809e+07 5.13162e+06 23084 3.52427e+07 0 0.1268 0.993432 0.820044 7.08127e+07 0.00301706 1.53343e+07 1.74338e+07 1.54309e+07 197 1.54187e+07 9.91101e+06 0.00255159 1.55132e+07 50.1528 0.0219833 0.995746 0 50.157 GTEX-14JIY-0011-R10a-SM-AHZ75 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 796 ChIP-Seq GTEX-14JIY-0011-R11b-SM-62LE8 B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 796 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.988845 886049 0.942819 0.992146 0.8417 21818 1 76 0.00280478 160 0 7.06273e+07 0.0567737 3.90456e+06 7.11864e+07 5.24137e+06 21830 3.51185e+07 0 0.101119 0.992146 0.835089 7.06273e+07 0.00324556 1.51485e+07 2.80484e+07 1.5306e+07 202 1.5303e+07 9.0629e+06 0.00302443 1.53773e+07 50.1212 0.0548498 0.995446 0 50.2587 GTEX-14JIY-0011-R1a-SM-68713 B1, A1 8 Brain Brain - Hippocampus 0001954 796 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990798 692919 0.958717 0.991613 0.829495 23964 1 76 0.00230381 372 0 1.02801e+08 0.041039 5.86624e+06 1.03671e+08 5.49783e+06 23985 5.122e+07 0 0.129222 0.991613 0.822538 1.02801e+08 0.00286281 2.22848e+07 3.26119e+07 2.24792e+07 353 2.22593e+07 9.10701e+06 0.00258308 2.25925e+07 50.3714 0.0565853 0.992428 0 50.2171 GTEX-14JIY-0011-R3a-SM-5YYAQ B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 796 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991043 1.31585e+06 0.951371 0.992674 0.862145 23123 1 76 0.00265071 373 0 1.04431e+08 0.0481537 6.1142e+06 1.05201e+08 4.66124e+06 23136 5.19527e+07 0 0.0892259 0.992674 0.85583 1.04431e+08 0.00344166 2.25897e+07 3.89256e+07 2.27972e+07 376 2.26201e+07 1.34731e+07 0.00304554 2.29506e+07 50.3627 0.058119 0.994306 0 50.2287 GTEX-14JIY-0011-R4b-SM-5ZZV7 B1, A1 7.3 Brain Brain - Amygdala 0001876 796 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994066 1.05327e+06 0.954458 0.995267 0.864054 22891 1 76 0.0020943 374 0 9.99196e+07 0.0450921 6.03751e+06 1.00395e+08 9.52744e+06 22903 4.98135e+07 0 0.0904034 0.995267 0.859964 9.99196e+07 0.00313567 2.15684e+07 3.66358e+07 2.1934e+07 332 2.17772e+07 1.34091e+07 0.00261436 2.18476e+07 50.0806 0.0601377 0.996467 0 50.4202 GTEX-14JIY-0011-R5b-SM-62LE7 B1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 796 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989743 1.16071e+06 0.947727 0.99311 0.863194 21903 1 76 0.00266901 272 0 8.25083e+07 0.0518126 3.60876e+06 8.30807e+07 5.68906e+06 21916 4.10379e+07 0 0.0845329 0.99311 0.857247 8.25083e+07 0.00325392 1.77039e+07 3.45207e+07 1.78304e+07 263 1.77827e+07 1.19047e+07 0.00296047 1.80181e+07 50.3288 0.0434368 0.996476 0 50.178 GTEX-14JIY-0011-R6b-SM-68714 B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 796 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991775 446104 0.959179 0.992547 0.817618 24851 1 76 0.00218977 269 0 9.22835e+07 0.0403372 3.45658e+06 9.29764e+07 5.21391e+06 24873 4.59746e+07 0 0.141561 0.992547 0.811524 9.22835e+07 0.00271984 2.01896e+07 1.45348e+07 2.0225e+07 293 2.01521e+07 1.22505e+07 0.0024546 2.03321e+07 50.2224 0.037177 0.993319 0 50.0438 GTEX-14JIY-0011-R8a-SM-6AJAP B1, A1 7.7 Brain Brain - Hypothalamus 0001898 796 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991147 616461 0.957345 0.993501 0.832442 23649 1 76 0.00220298 271 0 7.60253e+07 0.0423388 4.16828e+06 7.65226e+07 5.41721e+06 23671 3.78449e+07 0 0.124903 0.993501 0.827032 7.60253e+07 0.00319901 1.65575e+07 2.03102e+07 1.6725e+07 257 1.66518e+07 8.71466e+06 0.00269981 1.68013e+07 50.2234 0.0544712 0.995856 0 50.2515 GTEX-14JIY-0011-R9a-SM-6EU34 B1, A1 8 Brain Brain - Spinal cord (cervical c-1) 0006469 796 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991357 484122 0.955967 0.992852 0.822869 23476 1 76 0.00425313 152 0 6.75679e+07 0.0436526 1.66323e+06 6.80543e+07 6.73821e+06 23492 3.36412e+07 0 0.133098 0.992852 0.816987 6.75679e+07 0.00429873 1.49161e+07 1.35535e+07 1.50426e+07 163 1.49442e+07 9.77304e+06 0.00427589 1.51136e+07 50.2818 0.0244397 0.994347 0 50.2111 GTEX-14JIY-0126-SM-6LLH6 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~50 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1031 519 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978681 221632 0.972402 0.986889 0.775924 25128 1 76 0.00257074 211 0 9.41078e+07 0.0272985 569129 9.53581e+07 8.3443e+06 25171 4.65497e+07 0 0.196479 0.986889 0.76575 9.41078e+07 0.00394155 2.06725e+07 8.78363e+06 2.06516e+07 243 2.09458e+07 1.6153e+07 0.00325044 2.11211e+07 50.2083 0.00596833 0.995096 0 49.9746 GTEX-14JIY-0426-SM-62LF7 0 B1 2 pieces, interstitial/ahderent fat is ~15%, rep foci delineated 7.9 Muscle Muscle - Skeletal 0011907 1038 512 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989947 186355 0.982281 0.993363 0.871784 20570 1 76 0.00254137 200 0 8.82464e+07 0.0175039 1.28849e+06 8.8836e+07 6.3801e+06 20576 4.39033e+07 0 0.110497 0.993363 0.865999 8.82464e+07 0.00302468 1.90499e+07 8.50669e+06 1.91905e+07 231 1.92253e+07 1.88955e+07 0.00278219 1.92844e+07 50.0767 0.0145041 0.996779 0 50.1838 GTEX-14JIY-0526-SM-62LFH 0 B1 2 pieces, trace fascia/vascular elements, rep delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 1040 510 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987006 149243 0.976604 0.990859 0.81742 22611 1 76 0.00286768 158 0 7.32584e+07 0.0230394 396552 7.39342e+07 5.16803e+06 22637 3.63936e+07 0 0.159184 0.990859 0.809949 7.32584e+07 0.00366611 1.61418e+07 6.69053e+06 1.61721e+07 169 1.62078e+07 1.30165e+07 0.00326534 1.63658e+07 50.2424 0.00536358 0.994713 0 50.0469 GTEX-14JIY-0626-SM-62LF9 1 B1 2 pieces, subtotally occlusive focally calcified (encircled) atherosis, large adherent nubbins of fat/myocardium up to ~5mm, delineated 5.7 Blood Vessel Artery - Coronary 0001621 1042 508 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.985717 91514 0.989158 0.990139 0.863285 16402 1 76 0.0033476 189 0 6.34731e+07 0.0108243 5.84586e+06 6.41052e+07 4.52333e+06 16403 3.15396e+07 0 0.125873 0.990139 0.854772 6.34731e+07 0.0042373 1.39958e+07 2.81041e+07 1.40012e+07 238 1.37456e+07 1.68415e+06 0.00379046 1.44578e+07 51.2626 0.0911917 0.994562 0 50.0098 GTEX-14JIY-0926-SM-6871D 1 B1 6 pieces, squamous mucosa is ~0.5mm, ~20% thickness 6.8 Esophagus Esophagus - Mucosa 0006920 1050 500 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989529 364257 0.973525 0.990238 0.748708 21955 1 76 0.00232037 269 0 9.61631e+07 0.0262033 952589 9.71111e+07 5.51536e+06 21982 4.78918e+07 0 0.224817 0.990238 0.741399 9.61631e+07 0.002889 2.17003e+07 1.39894e+07 2.17887e+07 257 2.17233e+07 1.39952e+07 0.00260448 2.18407e+07 50.1347 0.00980927 0.990948 0 50.1016 GTEX-14JIY-1126-SM-6EU28 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemia 5.8 Heart Heart - Left Ventricle 0006566 1051 499 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989572 86043 0.990356 0.99112 0.865312 17763 1 76 0.00469202 365 0 8.53958e+07 0.00961575 8.78282e+06 8.61609e+07 8.74851e+06 17766 4.25477e+07 0 0.125043 0.99112 0.857628 8.53958e+07 0.0046666 1.84654e+07 3.56896e+07 1.93776e+07 334 1.89853e+07 2.58659e+06 0.00467933 1.90193e+07 50.0447 0.101935 0.992668 0 51.2052 GTEX-14JIY-1126-SM-CYKOI 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemia 5.8 Heart Heart - Left Ventricle 0006566 1051 499 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 RIP-Seq GTEX-14JIY-1226-SM-6871R 1 B1 2 pieces, goiter, regressive changes/cystic degeneration, foci delineated 7.1 Thyroid Thyroid 0002046 1053 497 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988262 475661 0.961627 0.989048 0.780409 23152 1 76 0.00232532 176 0 8.19092e+07 0.0380556 488250 8.28162e+07 4.45727e+06 23178 4.07738e+07 0 0.181218 0.989048 0.771862 8.19092e+07 0.00295973 1.78959e+07 1.66465e+07 1.80407e+07 187 1.79918e+07 1.43074e+07 0.00264228 1.802e+07 50.0392 0.00589559 0.989834 0 50.2015 GTEX-14JIY-1326-SM-6AJB3 1 B1 2 pieces marked acute/subacute congestion 6.1 Lung Lung 0008952 1056 494 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.987897 181598 0.972096 0.990668 0.695587 22869 1 76 0.00249539 127 0 6.79488e+07 0.0276403 316462 6.85889e+07 4.8672e+06 22899 3.37668e+07 0 0.276509 0.990668 0.689096 6.79488e+07 0.00378433 1.49892e+07 6.77753e+06 1.50754e+07 147 1.50723e+07 8.87447e+06 0.00313806 1.51718e+07 50.1644 0.0046139 0.99344 0 50.1433 GTEX-14JIY-1326-SM-CYKT3 1 B1 2 pieces marked acute/subacute congestion 6.1 Lung Lung 0008952 1056 494 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 RIP-Seq GTEX-14JIY-1426-SM-6EU29 1 B1 2 pieces, trace vascular elements, rep delineated 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1055 495 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.988676 173328 0.973703 0.990215 0.79452 22928 1 76 0.00431007 134 0 6.74147e+07 0.0260285 508117 6.80809e+07 6.51896e+06 22946 3.35435e+07 0 0.179183 0.990215 0.786745 6.74147e+07 0.00441138 1.48674e+07 8.18016e+06 1.49138e+07 150 1.48721e+07 1.02151e+07 0.00436065 1.50147e+07 50.2387 0.00746343 0.991753 0 50.078 GTEX-14JIY-2326-SM-6AJAJ 1 B1 4 pieces, no abnormalities 7.4 Brain Brain - Cerebellum 0002037 1139 411 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990295 361180 0.942373 0.992455 0.712369 23022 1 76 0.00233898 129 0 6.73255e+07 0.0572366 811671 6.78373e+07 4.69716e+06 23049 3.34992e+07 0 0.230003 0.992455 0.706995 6.73255e+07 0.00320914 1.44555e+07 1.65161e+07 1.45639e+07 147 1.45775e+07 8.46475e+06 0.00277312 1.45805e+07 50.0052 0.011965 0.994616 0 50.1868 GTEX-14JIY-2926-SM-69LPT 1 B1 6 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1136 414 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993175 667222 0.950033 0.994572 0.800708 23934 1 76 0.00204275 268 0 8.07406e+07 0.0495946 2.2965e+06 8.11812e+07 4.71132e+06 23955 4.02183e+07 0 0.149325 0.994572 0.796362 8.07406e+07 0.00294136 1.74808e+07 2.57554e+07 1.75154e+07 256 1.74702e+07 9.86507e+06 0.00249143 1.76374e+07 50.2382 0.0282885 0.995968 0 50.0493 GTEX-14JIY-2926-SM-CYKO5 1 B1 6 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1136 414 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 RIP-Seq GTEX-14JIY-3026-SM-6EU1R 1 B1 2 pieces, single 1.7mm nodule of glandular tissue, rest is connect tissue elements/muscle 7.5 Salivary Gland Minor Salivary Gland 0006330 1086 464 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992713 142861 0.975422 0.994024 0.835341 22501 1 76 0.00421553 128 0 7.10395e+07 0.024254 1.03784e+06 7.14666e+07 7.18808e+06 22518 3.53925e+07 0 0.140081 0.994024 0.830349 7.10395e+07 0.00417075 1.54621e+07 9.4296e+06 1.55583e+07 160 1.5497e+07 1.16746e+07 0.00419317 1.56177e+07 50.194 0.014522 0.995335 0 50.155 GTEX-14JIY-3326-SM-6871E 1 B1 2 pieces colon with mucosa, the latter ~0.5mm, well preserved, switched with 3125 7.6 Colon Colon - Transverse 0001157 1081 469 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989863 274323 0.976705 0.990657 0.813974 22925 1 76 0.00247597 291 0 9.98495e+07 0.0223637 1.91266e+06 1.00791e+08 5.77116e+06 22961 4.97102e+07 0 0.162731 0.990657 0.806369 9.98495e+07 0.00306208 2.23353e+07 1.37482e+07 2.2452e+07 312 2.2355e+07 1.57379e+07 0.00276879 2.25111e+07 50.174 0.0189764 0.99145 0 50.1302 GTEX-14LLW-0002-SM-5HX99 C1 Blood Whole Blood 0013756 1356 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-4932 03/10/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14LLW-0002-SM-7DRNS C1 Blood Whole Blood 0013756 1356 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14LLW-0006-SM-9QEGG C1 6.7 Blood Whole Blood 0013756 1356 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.961799 441119 0.98311 0.964647 0.811048 16871 1 76 0.00179922 150 0 1.04921e+08 0.0159888 397204 1.08766e+08 5.05669e+06 16877 5.21501e+07 0 0.172062 0.964647 0.782376 1.04921e+08 0.00418217 2.475e+07 1.55216e+08 2.48957e+07 191 2.49486e+07 2.80168e+07 0.00298718 2.50166e+07 50.068 0.0036519 0.967496 0 50.1467 GTEX-14LLW-0011-R10a-SM-62LEG C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 1360 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.984558 875545 0.947962 0.98824 0.858438 21793 1 76 0.00260608 214 0 7.23055e+07 0.0517625 3.99664e+06 7.31659e+07 5.40152e+06 21807 3.593e+07 0 0.0895243 0.98824 0.848343 7.23055e+07 0.00329143 1.55044e+07 2.56761e+07 1.57885e+07 229 1.56498e+07 9.25016e+06 0.00294748 1.59198e+07 50.4277 0.0546244 0.991923 0 50.454 GTEX-14LLW-0011-R10a-SM-AHZNO C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1360 ChIP-Seq GTEX-14LLW-0011-R11b-SM-62LEH C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 1360 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.986311 2.28873e+06 0.90561 0.990144 0.80428 22156 1 76 0.0025157 200 0 7.54813e+07 0.09403 4.42856e+06 7.62326e+07 5.45111e+06 22173 3.75081e+07 0 0.10133 0.990144 0.796353 7.54813e+07 0.00336882 1.56052e+07 6.42116e+07 1.57553e+07 214 1.56842e+07 9.24891e+06 0.00294061 1.60023e+07 50.5019 0.0580927 0.993977 0 50.2394 GTEX-14LLW-0011-R1a-SM-5ZZVD C1, A1 6.3 Brain Brain - Hippocampus 0001954 1360 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992199 819792 0.95073 0.993991 0.862913 21404 1 76 0.00180019 205 0 6.6749e+07 0.0490049 3.67757e+06 6.71525e+07 5.98915e+06 21417 3.32492e+07 0 0.0878168 0.993991 0.857728 6.6749e+07 0.00317563 1.43407e+07 2.39881e+07 1.45073e+07 217 1.43515e+07 8.2968e+06 0.00248667 1.46338e+07 50.487 0.0547644 0.995784 0 50.2888 GTEX-14LLW-0011-R3b-SM-62LFW C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1360 BP-49031 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988052 1.10643e+06 0.954806 0.991512 0.828587 24088 1 76 0.0025944 371 0 1.05713e+08 0.0449273 8.52334e+06 1.06618e+08 7.35576e+06 24112 5.25569e+07 0 0.126218 0.991512 0.821554 1.05713e+08 0.00318466 2.29532e+07 3.95759e+07 2.31067e+07 368 2.30554e+07 1.12558e+07 0.0028885 2.33321e+07 50.2983 0.0799425 0.994972 0 50.1666 GTEX-14LLW-0011-R5b-SM-5ZZU6 C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 1360 BP-49031 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993274 948237 0.93981 0.994566 0.80111 23706 1 76 0.0019434 198 0 7.36676e+07 0.0599539 4.07101e+06 7.407e+07 6.593e+06 23725 3.67162e+07 0 0.1387 0.994566 0.796756 7.36676e+07 0.00312728 1.57446e+07 3.12467e+07 1.59157e+07 241 1.5807e+07 7.83811e+06 0.00253457 1.5963e+07 50.2455 0.0549616 0.995858 0 50.2702 GTEX-14LLW-0011-R8a-SM-62LFG C1, A1 8.1 Brain Brain - Hypothalamus 0001898 1360 BP-49027 RNA isolation_PAXgene Tissue miRNA 02/03/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.981291 3.34635e+06 0.828277 0.985326 0.686491 21630 1 76 0.00259194 141 0 7.21595e+07 0.170992 2.27309e+06 7.32341e+07 5.3208e+06 21639 3.58294e+07 0 0.141785 0.985326 0.676418 7.21595e+07 0.00340008 1.34083e+07 1.24326e+08 1.38703e+07 160 1.38276e+07 8.14006e+06 0.00299435 1.37999e+07 49.9499 0.0310386 0.989362 0 50.8468 GTEX-14LLW-0126-SM-6LLIO 1 C1 6 pieces; well trimmed; 10% dermal fat 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1394 411 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.974872 258041 0.972891 0.98473 0.768647 24731 1 76 0.0024782 228 0 9.48977e+07 0.0268891 474287 9.63693e+07 8.12701e+06 24775 4.68407e+07 0 0.204244 0.98473 0.75691 9.48977e+07 0.00414162 2.07715e+07 9.51737e+06 2.07235e+07 242 2.10603e+07 1.50229e+07 0.00330158 2.13492e+07 50.3406 0.00492156 0.994589 0 49.9421 GTEX-14LLW-0226-SM-62LEL 1 C1 2 pieces; minimal fibrous content 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1396 410 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986012 252537 0.977094 0.990015 0.794778 22293 1 76 0.0027893 163 0 7.59116e+07 0.0226283 539064 7.66773e+07 5.08766e+06 22332 3.77043e+07 0 0.182316 0.990015 0.786842 7.59116e+07 0.00374724 1.67394e+07 8.31125e+06 1.68414e+07 184 1.68514e+07 1.18284e+07 0.00326634 1.70057e+07 50.2279 0.0070303 0.994017 0 50.1518 GTEX-14LLW-0326-SM-5ZZWD 1 C1 2 pieces; 20% & 10% internal & external fat 6.3 Nerve Nerve - Tibial 0001323 1397 409 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993315 162601 0.964308 0.994547 0.718382 25842 1 76 0.00219297 158 0 7.02102e+07 0.0354101 196216 7.05952e+07 6.30832e+06 25881 3.49714e+07 0 0.245926 0.994547 0.714464 7.02102e+07 0.00320316 1.54e+07 7.37534e+06 1.54393e+07 153 1.5395e+07 1.05006e+07 0.00269744 1.55311e+07 50.2199 0.00277945 0.99578 0 50.0637 GTEX-14LLW-0526-SM-62LFB 1 C1 2 pieces; 5% internal fat 7.3 Muscle Muscle - Skeletal 0011907 1400 407 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988784 250598 0.982485 0.992952 0.86807 20424 1 76 0.00250668 275 0 1.04332e+08 0.0172844 1.47385e+06 1.05073e+08 7.56502e+06 20438 5.18485e+07 0 0.114415 0.992952 0.861952 1.04332e+08 0.0033483 2.30118e+07 9.37261e+06 2.3126e+07 306 2.32274e+07 2.15993e+07 0.00292572 2.3308e+07 50.0866 0.0140269 0.997119 0 50.1237 GTEX-14LLW-0526-SM-CYKP4 1 C1 2 pieces; 5% internal fat 7.3 Muscle Muscle - Skeletal 0011907 1400 407 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 RIP-Seq GTEX-14LLW-0626-SM-62LFC 1 C1 2 pieces; atrophic ducts (no lobules) in fibroadipose tissue 7 Breast Breast - Mammary Tissue 0008367 1401 407 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987036 150967 0.976873 0.990832 0.746104 23084 1 76 0.00294055 137 0 6.15781e+07 0.022767 236787 6.21479e+07 4.26483e+06 23119 3.05745e+07 0 0.230769 0.990832 0.739264 6.15781e+07 0.0037899 1.36066e+07 6.82148e+06 1.36991e+07 135 1.37115e+07 1.0341e+07 0.0033636 1.38148e+07 50.1876 0.00381006 0.994629 0 50.1693 GTEX-14LLW-0726-SM-5ZZVV 1 C1 2 pieces; patchy atelectasis& congestion 5.9 Lung Lung 0008952 1402 406 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.990475 128536 0.969548 0.992255 0.787377 22541 1 76 0.00225391 127 0 5.39877e+07 0.0301644 257269 5.4409e+07 4.61143e+06 22560 2.68596e+07 0 0.182171 0.992255 0.781279 5.39877e+07 0.00361431 1.17859e+07 6.3157e+06 1.18751e+07 135 1.18315e+07 8.69815e+06 0.00293289 1.19253e+07 50.1973 0.00472842 0.994036 0 50.1885 GTEX-14LLW-2626-SM-62LDZ 1 C1 6 pieces; well trimmed; 10% dermal fat 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1416 402 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.984719 178255 0.97349 0.989681 0.751705 23096 1 76 0.00281806 160 0 7.57481e+07 0.0263206 489175 7.65379e+07 5.61295e+06 23127 3.75819e+07 0 0.221784 0.989681 0.743948 7.57481e+07 0.00404904 1.66238e+07 8.09478e+06 1.67492e+07 167 1.68104e+07 1.15362e+07 0.00343046 1.69107e+07 50.1487 0.00639128 0.994642 0 50.1879 GTEX-14LLW-2826-SM-62LE1 2 C1 4 fragmented pieces; CEREBRUM, not cerebellum; LDACC note: 2826 and 2926 may both be cerebellum 6.2 Brain Brain - Cerebellum 0002037 1418 401 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.98782 318587 0.969088 0.991644 0.838268 23406 1 76 0.0025599 268 0 8.27011e+07 0.0306661 5.05332e+06 8.3398e+07 5.82902e+06 23422 4.11084e+07 0 0.13082 0.991644 0.831263 8.27011e+07 0.00336378 1.80748e+07 2.12548e+07 1.82477e+07 285 1.80887e+07 8.57059e+06 0.00296029 1.85051e+07 50.569 0.0605928 0.995468 0 50.238 GTEX-14LLW-3026-SM-6EU1O 2 C1 1 piece 6.7 Pituitary Pituitary 0000007 1420 400 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.988929 405402 0.959068 0.990497 0.799168 24452 1 76 0.00411321 135 0 7.01562e+07 0.0407006 742867 7.08293e+07 6.83818e+06 24470 3.49176e+07 0 0.1599 0.990497 0.791574 7.01562e+07 0.00418001 1.51579e+07 1.57261e+07 1.52236e+07 163 1.51629e+07 1.01684e+07 0.00414656 1.53338e+07 50.2801 0.0104881 0.992066 0 50.108 GTEX-14LZ3-0003-SM-5GYE9 C1 Blood Whole Blood 0013756 791 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14LZ3-0003-SM-7DLGY C1 Blood Whole Blood 0013756 791 BP-47690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2013 LCSET-6363 01/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14LZ3-0005-SM-7MXUG C1 7.2 Blood Whole Blood 0013756 791 BP-47516 RNA isolation_PAXgene Blood RNA (Manual) 12/17/2013 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.971126 258470 0.97615 0.981278 0.781122 18594 1 76 0.00336352 116 0 6.53373e+07 0.023347 502341 6.65839e+07 9.60984e+06 18605 3.22588e+07 0 0.195028 0.981278 0.766498 6.53373e+07 0.00486691 1.46957e+07 5.02208e+07 1.48226e+07 125 1.50913e+07 1.30299e+07 0.00410744 1.50848e+07 49.9893 0.00754448 0.99143 0 50.2149 GTEX-14LZ3-0011-R10a-SM-AHZNP C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 805 ChIP-Seq GTEX-14LZ3-0011-R10b-SM-6AJA9 C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 805 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991357 668244 0.946381 0.993741 0.808437 22705 1 76 0.00220441 154 0 6.59566e+07 0.0533372 3.51032e+06 6.63721e+07 4.39074e+06 22716 3.28323e+07 0 0.137944 0.993741 0.803377 6.59566e+07 0.00332886 1.40723e+07 2.7531e+07 1.42893e+07 193 1.41031e+07 6.52775e+06 0.00276529 1.44147e+07 50.5463 0.0528885 0.996125 0 50.3826 GTEX-14LZ3-0011-R1a-SM-69LP5 C1, A1 6.6 Brain Brain - Hippocampus 0001954 805 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991949 834641 0.954405 0.993345 0.805513 21615 1 76 0.00225238 370 0 8.77712e+07 0.0454278 8.06964e+06 8.83592e+07 5.41806e+06 21626 4.37409e+07 0 0.148892 0.993345 0.800153 8.77712e+07 0.00311248 1.88801e+07 4.95351e+07 1.91873e+07 351 1.87299e+07 5.92378e+06 0.00268182 1.94581e+07 50.9534 0.0913277 0.994742 0 50.4035 GTEX-14LZ3-0011-R3a-SM-664NQ C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 805 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.984846 822006 0.956156 0.985115 0.83464 22647 1 76 0.00276886 367 0 9.55731e+07 0.0436673 8.82844e+06 9.70173e+07 7.30136e+06 22664 4.74578e+07 0 0.121517 0.985115 0.822216 9.55731e+07 0.00384082 2.0567e+07 3.85865e+07 2.13725e+07 395 2.08954e+07 6.3469e+06 0.00330469 2.10738e+07 50.2126 0.0909986 0.985383 0 50.9604 GTEX-14LZ3-0011-R5b-SM-5ZZV8 C1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 805 BP-49168 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993336 781161 0.958171 0.994657 0.817218 21581 1 76 0.00243976 267 0 8.37652e+07 0.0416512 7.97052e+06 8.42151e+07 7.47999e+06 21595 4.17625e+07 0 0.140953 0.994657 0.812851 8.37652e+07 0.00349865 1.77342e+07 4.49699e+07 1.84325e+07 298 1.81206e+07 6.29512e+06 0.0029685 1.81364e+07 50.0218 0.0946448 0.995978 0 50.9654 GTEX-14LZ3-0011-R6a-SM-686ZO C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 805 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.988283 1.47974e+06 0.935011 0.989305 0.787451 23365 1 76 0.00252408 369 0 1.05533e+08 0.0648461 1.0984e+07 1.06673e+08 5.59058e+06 23382 5.2564e+07 0 0.14756 0.989305 0.779029 1.05533e+08 0.00320421 2.2059e+07 6.49191e+07 2.24411e+07 362 2.19948e+07 6.17774e+06 0.00286379 2.26252e+07 50.7064 0.102968 0.990326 0 50.4293 GTEX-14LZ3-0011-R6a-SM-69LQM C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 805 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.993352 856334 0.948227 0.994639 0.80193 23216 1 76 0.00218899 265 0 8.41327e+07 0.0515578 6.1261e+06 8.45862e+07 5.23416e+06 23238 4.19326e+07 0 0.146297 0.994639 0.797631 8.41327e+07 0.00294297 1.80506e+07 3.54992e+07 1.81474e+07 304 1.79369e+07 6.80508e+06 0.00256549 1.83693e+07 50.5955 0.0724243 0.995926 0 50.1337 GTEX-14LZ3-0011-R6a-SM-D3L8C C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 805 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992119 808345 0.961206 0.994144 0.831784 24760 1 76 0.00290881 373 0 1.31431e+08 0.0385738 1.13261e+07 1.32205e+08 1.34155e+07 24785 6.54446e+07 0 0.129422 0.994144 0.826913 1.31431e+08 0.00375074 2.82075e+07 3.34124e+07 2.91117e+07 367 2.89098e+07 1.14987e+07 0.00332891 2.86216e+07 49.7495 0.085671 0.996169 0 50.7888 GTEX-14LZ3-0011-R7a-SM-69LQN C1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 805 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.989974 936877 0.956308 0.991262 0.806462 20175 1 76 0.00231008 369 0 8.66539e+07 0.0435471 8.77924e+06 8.74178e+07 5.25804e+06 20180 4.32027e+07 0 0.149845 0.991262 0.799415 8.66539e+07 0.00307024 1.84006e+07 6.20457e+07 1.85068e+07 336 1.80263e+07 4.80609e+06 0.00268967 1.89982e+07 51.3126 0.100428 0.992549 0 50.1439 GTEX-14LZ3-0011-R8b-SM-69LOZ C1, A1 6.9 Brain Brain - Hypothalamus 0001898 805 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.991924 725812 0.952511 0.99334 0.820031 23123 1 76 0.00221235 266 0 7.99291e+07 0.0473018 6.01116e+06 8.0465e+07 4.73728e+06 23137 3.98270e+07 0 0.13248 0.99334 0.81457 7.99291e+07 0.00303698 1.72708e+07 3.02419e+07 1.75968e+07 316 1.73539e+07 6.31853e+06 0.00262407 1.76342e+07 50.4005 0.0747054 0.994757 0 50.4676 GTEX-14LZ3-0011-R8b-SM-69LP6 C1, A1 8.3 Brain Brain - Hypothalamus 0001898 805 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.992689 861811 0.949111 0.994039 0.815151 24210 1 76 0.00202633 270 0 8.27537e+07 0.0505751 3.04235e+06 8.32499e+07 4.98924e+06 24236 4.12377e+07 0 0.13396 0.994039 0.810292 8.27537e+07 0.00291262 1.8016e+07 2.70903e+07 1.81263e+07 278 1.80441e+07 1.07418e+07 0.00246887 1.82231e+07 50.2467 0.0365447 0.995389 0 50.1526 GTEX-14LZ3-0011-R8b-SM-COH3M C1, A1 6.9 Brain Brain - Hypothalamus 0001898 805 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99276 674880 0.956657 0.994117 0.829963 23584 1 76 0.00376064 267 0 8.33434e+07 0.0431354 7.07963e+06 8.38366e+07 8.24751e+06 23598 4.15293e+07 0 0.126694 0.994117 0.825081 8.33434e+07 0.0044597 1.80041e+07 2.64283e+07 1.85723e+07 308 1.83303e+07 7.07094e+06 0.00410969 1.83503e+07 50.0273 0.0844456 0.995475 0 50.7767 GTEX-14LZ3-0126-SM-69LPM 2 C1 6 pieces; scant to 30% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 877 1106 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993401 198095 0.977732 0.99455 0.817898 22952 1 76 0.00196621 178 0 7.55129e+07 0.0220346 292939 7.59267e+07 4.60929e+06 22976 3.76267e+07 0 0.159834 0.99455 0.81344 7.55129e+07 0.00273131 1.6554e+07 8.51442e+06 1.66477e+07 181 1.66184e+07 1.41796e+07 0.00234832 1.66687e+07 50.0755 0.00385818 0.995699 0 50.1411 GTEX-14LZ3-0226-SM-62LET 2 C1 6 pieces; ~10% internal fat, epidermis measures 31 microns 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 880 1103 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986513 204590 0.975319 0.9905 0.750301 22739 1 76 0.00293622 182 0 7.46786e+07 0.0244528 553705 7.53949e+07 5.59463e+06 22768 3.7094e+07 0 0.225019 0.9905 0.743173 7.46786e+07 0.00377492 1.62019e+07 7.89778e+06 1.62912e+07 163 1.63335e+07 1.14143e+07 0.00335388 1.64319e+07 50.1501 0.00734407 0.994487 0 50.1374 GTEX-14LZ3-0626-SM-5ZZWP 1 C1 2 pieces; 20% internal fat 8 Muscle Muscle - Skeletal 0011907 898 1087 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994316 208918 0.981707 0.995502 0.845314 21794 1 76 0.0019666 205 0 8.12478e+07 0.018051 1.24959e+06 8.16149e+07 7.61484e+06 21807 4.05153e+07 0 0.136394 0.995502 0.841512 8.12478e+07 0.00296987 1.78477e+07 9.35382e+06 1.7852e+07 209 1.78534e+07 1.64672e+07 0.00246764 1.79356e+07 50.1149 0.0153109 0.996688 0 50.006 GTEX-14LZ3-0626-SM-CYKQF 1 C1 2 pieces; 20% internal fat 8 Muscle Muscle - Skeletal 0011907 898 1087 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 RIP-Seq GTEX-14LZ3-0726-SM-5YYAB 2 C1 2 pieces; congestion and atelectasis, few collections of lymphocytes 6.4 Lung Lung 0008952 917 1068 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.946652 304798 0.965966 0.948347 0.782035 24742 1 76 0.00294784 209 0 9.54709e+07 0.0337452 589493 1.00671e+08 4.97272e+06 24774 4.73672e+07 0 0.183931 0.948347 0.74164 9.54709e+07 0.00392176 2.10044e+07 1.0798e+07 2.10549e+07 238 2.10929e+07 1.45028e+07 0.00343393 2.11362e+07 50.0512 0.00585564 0.950042 0 50.0601 GTEX-14LZ3-1826-SM-5YY8Y 2 C1 6 pieces; well trimmed 5.7 Esophagus Esophagus - Muscularis 0004648 933 1058 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 EXCLUDE 0.989823 212485 0.965156 0.990885 0.671918 26271 1 76 0.00289285 203 0 1.04049e+08 0.0344867 498136 1.05006e+08 4.69338e+06 26330 5.17417e+07 0 0.293238 0.990885 0.665793 1.04049e+08 0.00350546 2.27874e+07 9.69855e+06 2.28676e+07 209 2.28476e+07 1.48666e+07 0.00319883 2.29191e+07 50.0782 0.0047439 0.991947 0 50.0877 GTEX-14LZ3-2926-SM-5YY8T 2 C1 4 pieces; Purkinje cells with some evidence of hypoxic change 5.7 Brain Brain - Cerebellum 0002037 976 1021 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 EXCLUDE 0.987138 1.97957e+06 0.913893 0.988764 0.750638 23705 1 76 0.00300184 367 0 1.08618e+08 0.0857901 7.9387e+06 1.09852e+08 4.86114e+06 23718 5.40173e+07 0 0.163256 0.988764 0.742204 1.08618e+08 0.00386796 2.23719e+07 9.59416e+07 2.29854e+07 389 2.26703e+07 6.74400e+06 0.00343419 2.2875e+07 50.2247 0.072267 0.990391 0 50.6762 GTEX-14LZ3-3026-SM-5ZZVU 2 C1 5 pieces (fragmented); some increase in perinuclear halos (?hypoxic change vs autolysis) 6.1 Brain Brain - Cortex 0001870 978 1019 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993867 499665 0.957493 0.99506 0.826207 23112 1 76 0.00229211 267 0 7.98464e+07 0.0422472 4.61896e+06 8.02428e+07 7.15724e+06 23127 3.9807e+07 0 0.131286 0.99506 0.822126 7.98464e+07 0.00335458 1.7217e+07 2.72264e+07 1.75571e+07 275 1.73067e+07 7.95736e+06 0.00282271 1.75662e+07 50.3721 0.0575622 0.996252 0 50.4891 GTEX-14LZ3-3126-SM-69LPN 1 C1 1 piece; adenohypophysis and neurohypophysis with some squamous nests 6.4 Pituitary Pituitary 0000007 979 1018 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992102 288040 0.958985 0.993658 0.752548 24579 1 76 0.00207848 150 0 7.23855e+07 0.0408172 1.00513e+06 7.28475e+07 4.19148e+06 24610 3.60441e+07 0 0.206438 0.993658 0.747775 7.23855e+07 0.00301793 1.55101e+07 9.51649e+06 1.55746e+07 167 1.55439e+07 1.03491e+07 0.00254747 1.56499e+07 50.17 0.0137977 0.995214 0 50.1037 GTEX-14PHW-0002-SM-5GYEU C1 Blood Whole Blood 0013756 1141 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PHW-0002-SM-7DROQ C1 Blood Whole Blood 0013756 1141 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-6909,LCSET-6341 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-14PHW-0005-SM-9KNTK C1 8.3 Blood Whole Blood 0013756 1141 BP-47732 RNA isolation_PAXgene Blood RNA (Manual) 12/24/2013 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.952285 837859 0.9593 0.953413 0.75117 17891 1 76 0.00217524 89 0 8.727e+07 0.0391393 119195 9.15343e+07 1.11979e+07 17901 4.34431e+07 0 0.20813 0.953413 0.716175 8.727e+07 0.00333713 2.01688e+07 1.73277e+08 2.04264e+07 125 2.04086e+07 2.26541e+07 0.0027555 2.03147e+07 49.8847 0.00130219 0.954542 0 50.3173 GTEX-14PHW-0011-R10a-SM-AHZNG C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1155 ChIP-Seq GTEX-14PHW-0011-R6b-SM-5YYAR C1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1155 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.986519 588949 0.965431 0.987972 0.81311 20755 1 76 0.00286918 369 0 9.94312e+07 0.0344911 1.35465e+07 1.00642e+08 4.32684e+06 20765 4.95278e+07 0 0.15232 0.987972 0.80333 9.94312e+07 0.00355832 2.0848e+07 6.92827e+07 2.16497e+07 363 2.08577e+07 4.15892e+06 0.00321325 2.17844e+07 51.0867 0.134602 0.989424 0 50.9432 GTEX-14PHW-0126-SM-6LLJI 0 C1 6 pieces, minimal fat, squamous epithelium is ~30 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1209 875 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977101 187675 0.966406 0.985347 0.73125 25170 1 76 0.00256776 180 0 8.27371e+07 0.0333703 367878 8.39675e+07 7.41776e+06 25211 4.08839e+07 0 0.235156 0.985347 0.720534 8.27371e+07 0.0039542 1.79796e+07 8.30441e+06 1.79021e+07 179 1.81261e+07 1.25969e+07 0.00325518 1.84141e+07 50.3941 0.00438119 0.993592 0 49.8921 GTEX-14PHW-0526-SM-6LLIP 1 C1 2 pieces, rim of fat up to ~1mm 6.9 Nerve Nerve - Tibial 0001323 1233 853 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859,LCSET-6068 08/20/2014 TruSeq.v1 RNASEQ 0.982276 420305 0.969458 0.988174 0.776996 26446 1 76 0.00231467 402 0 1.6554e+08 0.0302615 975169 1.67521e+08 1.48611e+07 26505 8.20202e+07 0 0.192462 0.988174 0.767807 1.6554e+08 0.00378626 3.61251e+07 1.90997e+07 3.63543e+07 391 3.65527e+07 2.76534e+07 0.00304608 3.68741e+07 50.2188 0.00582116 0.994071 0 50.1581 GTEX-14PHW-1326-SM-6EU1S 2 C1 6 pieces, target muscularis 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1261 829 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.981958 189778 0.969142 0.983835 0.796409 22744 1 76 0.00430652 138 0 6.87088e+07 0.0306767 1.12079e+06 6.98378e+07 6.93152e+06 22766 3.41704e+07 0 0.172733 0.983835 0.783535 6.87088e+07 0.00448377 1.49982e+07 7.43857e+06 1.5103e+07 157 1.50419e+07 9.80981e+06 0.00439498 1.5188e+07 50.2417 0.0160485 0.985711 0 50.1741 GTEX-14PHW-1626-SM-6EU2H 1 C1 2 pieces, minimal fascia/vascular tissue 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1265 827 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989178 177643 0.978752 0.990708 0.787235 22465 1 76 0.00422741 148 0 7.5889e+07 0.0209183 440459 7.66007e+07 7.38924e+06 22492 3.7756e+07 0 0.191517 0.990708 0.77992 7.5889e+07 0.0042746 1.68088e+07 1.04566e+07 1.68376e+07 162 1.67917e+07 1.34282e+07 0.00425097 1.69741e+07 50.2702 0.00575006 0.992239 0 50.0428 GTEX-14PHW-2426-SM-69LPU 1 C1 2 pieces, myometrium only 7.6 Uterus Uterus 0000995 1282 815 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99149 139767 0.964751 0.992837 0.70732 23366 1 76 0.00219583 159 0 7.79302e+07 0.0350052 350163 7.84925e+07 4.91447e+06 23414 3.8764e+07 0 0.257431 0.992837 0.702254 7.79302e+07 0.00297324 1.71005e+07 8.61522e+06 1.71581e+07 169 1.71091e+07 1.16315e+07 0.00258401 1.72559e+07 50.2136 0.0044611 0.994184 0 50.0841 GTEX-14PHW-2926-SM-6AJBA 1 C1 2 pieces, no abnormalities 6.1 Thyroid Thyroid 0002046 1295 804 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.988837 166399 0.960507 0.991592 0.743705 23970 1 76 0.00224362 149 0 6.82803e+07 0.0391997 264270 6.88593e+07 4.63762e+06 24001 3.394e+07 0 0.216801 0.991592 0.737452 6.82803e+07 0.0035805 1.47772e+07 7.61081e+06 1.48887e+07 158 1.488e+07 1.01257e+07 0.0029102 1.49665e+07 50.1448 0.00383783 0.994347 0 50.1879 GTEX-14PHX-0001-SM-5GYEB C1 Blood Whole Blood 0013756 -253 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PHX-0001-SM-7DLGQ C1 Blood Whole Blood 0013756 -253 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-6363 01/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PHX-0006-SM-9MQJN C1 7.9 Blood Whole Blood 0013756 -253 BP-47732 RNA isolation_PAXgene Blood RNA (Manual) 12/24/2013 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 EXCLUDE 0.986751 689336 0.958508 0.989123 0.707641 18210 1 76 0.00408081 131 0 7.53399e+07 0.0411173 109813 7.61684e+07 6.02759e+06 18232 3.74893e+07 0 0.250867 0.989123 0.699944 7.53399e+07 0.00526896 1.63823e+07 1.64434e+07 1.64781e+07 142 1.65375e+07 1.15234e+07 0.00467346 1.6496e+07 49.9373 0.00144171 0.991496 0 50.1458 GTEX-14PHX-0526-SM-664NW 1 C1 2 pieces 6.5 Liver Liver 0001114 147 674 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.993333 226265 0.980986 0.993964 0.850152 21111 1 76 0.00217549 270 0 9.74143e+07 0.0172808 907358 9.80058e+07 5.90695e+06 21130 4.8478e+07 0 0.130834 0.993964 0.845021 9.74143e+07 0.00276631 2.11072e+07 1.66233e+07 2.11007e+07 267 2.10945e+07 2.08272e+07 0.00247071 2.11707e+07 50.0901 0.0092582 0.994596 0 49.9923 GTEX-14PHX-0626-SM-5YY8Z 1 C1 2 pieces; 20% fibrofatty content; focal percardial hyperplasia up to 1 mm [marked] 6.2 Heart Heart - Atrial Appendage 0006631 148 673 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991816 235084 0.979032 0.993013 0.819426 23015 1 76 0.00230865 270 0 1.06087e+08 0.0206856 1.55207e+06 1.06834e+08 4.6801e+06 23040 5.28486e+07 0 0.159606 0.993013 0.8137 1.06087e+08 0.00288523 2.27267e+07 2.40106e+07 2.28771e+07 316 2.27125e+07 1.71541e+07 0.00259659 2.30097e+07 50.325 0.0145279 0.994209 0 50.1649 GTEX-14PHX-0826-SM-69LPO 1 C1 6 pieces; well dissected 7.8 Esophagus Esophagus - Muscularis 0004648 149 673 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99346 254478 0.974519 0.994652 0.825053 22340 1 76 0.00173808 276 0 8.60326e+07 0.0252059 595848 8.64951e+07 4.98406e+06 22367 4.28806e+07 0 0.149466 0.994652 0.820641 8.60326e+07 0.00249044 1.86075e+07 7.72776e+06 1.86802e+07 262 1.86115e+07 1.46807e+07 0.00211381 1.87729e+07 50.2159 0.00688881 0.995845 0 50.0975 GTEX-14PHX-0926-SM-5ZZWC 1 C1 6 pieces; well dissected except for perimuscular stroma up to 1 mm; abundant ganglion cells in 1 piece [marked] LCM 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 153 670 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.99451 145167 0.97477 0.995751 0.826631 22496 1 76 0.00188517 213 0 7.93226e+07 0.024932 501059 7.96611e+07 7.23149e+06 22519 3.95443e+07 0 0.14814 0.995751 0.823118 7.93226e+07 0.00292453 1.71215e+07 6.95482e+06 1.73062e+07 223 1.72179e+07 1.41554e+07 0.0024042 1.73022e+07 50.1222 0.00628989 0.996993 0 50.2683 GTEX-14PHX-1026-SM-664OL 1 C1 6 pieces; well preserved, well dissected mucosa, no muscularis propria; focal basal gland dilatation, degeneration 7.3 Stomach Stomach 0000945 156 668 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989582 214958 0.977675 0.990403 0.822409 23737 1 76 0.00223044 333 0 1.07591e+08 0.0219525 877805 1.08634e+08 6.59974e+06 23766 5.35954e+07 0 0.155266 0.990403 0.814517 1.07591e+08 0.00296454 2.438e+07 6.08807e+07 2.46937e+07 327 2.46143e+07 2.29214e+07 0.00259719 2.45498e+07 49.9344 0.00808039 0.991225 0 50.3196 GTEX-14PHX-1126-SM-5YYA5 1 C1 6 pieces; musclularis with focally abundant submucosa up to 1.5mm; numerous ganglion cells focally [marked] LCM 8.2 Colon Colon - Sigmoid 0001159 159 665 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992994 211729 0.974437 0.994011 0.820677 23185 1 76 0.00250357 217 0 9.10507e+07 0.0252717 514553 9.15993e+07 4.04076e+06 23213 4.53433e+07 0 0.15376 0.994011 0.815762 9.10507e+07 0.0030317 1.97456e+07 8.84452e+06 1.99371e+07 247 1.98596e+07 1.66176e+07 0.00276736 1.99157e+07 50.0706 0.00561744 0.995028 0 50.2413 GTEX-14PHX-1426-SM-69LPP 1 C1 2 pieces; spermatogenesis 6.1 Testis Testis 0000473 164 662 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991256 279499 0.939508 0.992545 0.750193 32279 1 76 0.00197645 207 0 8.51151e+07 0.0602187 1.60693e+06 8.57544e+07 5.38269e+06 32335 4.24041e+07 0 0.189315 0.992545 0.7446 8.51151e+07 0.00273921 1.80606e+07 1.16729e+07 1.81098e+07 229 1.80767e+07 1.19353e+07 0.00235733 1.81897e+07 50.1558 0.0187387 0.993834 0 50.068 GTEX-14PHX-1526-SM-68717 1 C1 6 pieces; well preserved. well trimmed 6.9 Colon Colon - Transverse 0001157 165 662 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.99256 205154 0.975985 0.993218 0.80967 23453 1 76 0.00193872 282 0 9.927e+07 0.0235055 2.04596e+06 9.99479e+07 5.46086e+06 23485 4.94804e+07 0 0.166314 0.993218 0.804179 9.927e+07 0.00241217 2.20281e+07 1.82672e+07 2.21194e+07 327 2.19527e+07 1.39742e+07 0.00217529 2.22539e+07 50.3408 0.0204703 0.993876 0 50.1034 GTEX-14PHX-1626-SM-69LQB 0 C1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 166 662 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993476 174475 0.978312 0.994742 0.824651 22333 1 76 0.00178126 210 0 7.58147e+07 0.0213798 518111 7.62154e+07 4.90137e+06 22357 3.77925e+07 0 0.153661 0.994742 0.820316 7.58147e+07 0.00263982 1.67967e+07 7.61894e+06 1.69086e+07 215 1.68425e+07 1.33339e+07 0.00220999 1.69542e+07 50.1652 0.00679799 0.996009 0 50.1659 GTEX-14PHX-2026-SM-6872C 1 C1 2 pieces; 10% internal fibrofatty component 6.7 Pancreas Pancreas 0001150 173 657 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992365 282598 0.972696 0.993158 0.816162 23597 1 76 0.00202002 164 0 1.00401e+08 0.0271107 294842 1.01093e+08 5.48297e+06 23633 5.0049e+07 0 0.156534 0.993158 0.810578 1.00401e+08 0.00253232 2.27398e+07 1.95424e+07 2.28893e+07 192 2.2856e+07 2.58193e+07 0.00227597 2.28595e+07 50.0039 0.00291656 0.993951 0 50.1638 GTEX-14PHX-2126-SM-6EU2U 1 C1 2 pieces 7.6 Heart Heart - Left Ventricle 0006566 175 656 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992343 144667 0.982059 0.993671 0.853023 20223 1 76 0.00381928 119 0 6.48734e+07 0.0177303 944664 6.52866e+07 6.56752e+06 20236 3.23287e+07 0 0.129036 0.993671 0.847625 6.48734e+07 0.00369889 1.43728e+07 1.16478e+07 1.42645e+07 162 1.42297e+07 1.00246e+07 0.00375917 1.45101e+07 50.4878 0.0144695 0.994999 0 49.811 GTEX-14PHX-2226-SM-6EU2P 0 C1 6 pieces; well trimmed; 10% dermal fat 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 180 652 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990602 204684 0.972157 0.992217 0.814535 22765 1 76 0.00415903 147 0 6.598e+07 0.0276224 322810 6.64975e+07 6.68493e+06 22788 3.28549e+07 0 0.157622 0.992217 0.808195 6.598e+07 0.00421431 1.45223e+07 7.6661e+06 1.45933e+07 144 1.45597e+07 1.1749e+07 0.00418662 1.46618e+07 50.1747 0.00485447 0.993832 0 50.1219 GTEX-14PHX-2326-SM-62LEM 0 C1 6 pieces; well trimmed, <5% dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 258 574 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.9887 293584 0.973247 0.992175 0.818922 24497 1 76 0.00277089 390 0 1.14202e+08 0.0265036 579453 1.15102e+08 8.14471e+06 24526 5.67796e+07 0 0.154325 0.992175 0.812514 1.14202e+08 0.00336289 2.48841e+07 1.2194e+07 2.51704e+07 337 2.51693e+07 2.01373e+07 0.00306585 2.52459e+07 50.0759 0.00503425 0.99565 0 50.286 GTEX-14PHX-2426-SM-62LEN 0 C1 2 pieces 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 261 571 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989208 173325 0.976862 0.992571 0.816011 21999 1 76 0.00263355 170 0 7.56323e+07 0.0228583 243340 7.61984e+07 5.64578e+06 22023 3.7616e+07 0 0.16085 0.992571 0.809949 7.56323e+07 0.0031073 1.66547e+07 8.08841e+06 1.67355e+07 183 1.67748e+07 1.37434e+07 0.00286962 1.68458e+07 50.1056 0.0031935 0.995934 0 50.1209 GTEX-14PHX-2526-SM-62LEO 1 C1 2 pieces; 10% fat in 1 piece 7.8 Nerve Nerve - Tibial 0001323 278 555 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988988 182621 0.967152 0.992202 0.7567 23731 1 76 0.00272812 153 0 6.85825e+07 0.0325852 235843 6.91215e+07 4.50912e+06 23765 3.4105e+07 0 0.210452 0.992202 0.750799 6.85825e+07 0.00330097 1.50434e+07 6.24723e+06 1.51554e+07 151 1.51723e+07 1.08236e+07 0.00301362 1.52277e+07 50.0912 0.00341201 0.995415 0 50.1855 GTEX-14PHY-0002-SM-5GYE7 B1 Blood Whole Blood 0013756 -170 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PHY-0002-SM-7DLFV B1 Blood Whole Blood 0013756 -170 BP-47731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/24/2013 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PHY-0006-SM-7SB7I B1 9.3 Blood Whole Blood 0013756 -170 BP-47732 RNA isolation_PAXgene Blood RNA (Manual) 12/24/2013 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.983253 2.03268e+06 0.88309 0.985623 0.659089 18815 1 76 0.00282186 87 0 7.24769e+07 0.11594 108285 7.35341e+07 8.26645e+06 18834 3.60422e+07 0 0.224001 0.985623 0.649613 7.24769e+07 0.00436543 1.49773e+07 1.29132e+08 1.52792e+07 103 1.53326e+07 1.42222e+07 0.00359179 1.51582e+07 49.7139 0.00147258 0.987993 0 50.4989 GTEX-14PHY-0226-SM-5ZZWM 1 B1 2 pieces 8.1 Heart Heart - Left Ventricle 0006566 479 728 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994454 151389 0.983968 0.995493 0.846856 20484 1 76 0.00232742 267 0 8.7515e+07 0.0158267 1.61851e+06 8.79113e+07 8.1827e+06 20498 4.36518e+07 0 0.137112 0.995493 0.843039 8.7515e+07 0.00323582 1.91194e+07 2.33982e+07 1.89683e+07 272 1.88625e+07 1.23064e+07 0.00278115 1.92861e+07 50.5553 0.0184107 0.996531 0 49.8016 GTEX-14PHY-0326-SM-62LE3 2 B1 2 pieces; 30% non-muscular stroma 6.4 Heart Heart - Atrial Appendage 0006631 492 715 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989534 200784 0.97939 0.992738 0.835148 23060 1 76 0.00291688 270 0 9.29248e+07 0.020283 1.00122e+06 9.36045e+07 6.78033e+06 23079 4.62315e+07 0 0.144242 0.992738 0.829084 9.29248e+07 0.00344977 2.01296e+07 1.81506e+07 2.01446e+07 260 1.99859e+07 1.47945e+07 0.00318246 2.05401e+07 50.6837 0.0106963 0.995942 0 50.0186 GTEX-14PHY-0526-SM-664NM 1 B1 2 pieces; patchy pneumonia and fibrosis 6.2 Lung Lung 0008952 522 685 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990744 195478 0.971326 0.991412 0.777438 25011 1 76 0.00284471 167 0 8.34258e+07 0.0277376 314219 8.41484e+07 5.49423e+06 25053 4.14877e+07 0 0.193888 0.991412 0.770762 8.34258e+07 0.00372026 1.85235e+07 8.19296e+06 1.86623e+07 190 1.86008e+07 1.40147e+07 0.00328219 1.86422e+07 50.0556 0.0037341 0.992081 0 50.1866 GTEX-14PHY-0626-SM-664NN 1 B1 5 pieces; pseudodiverticulosis with active chronic inflammation 7.6 Esophagus Esophagus - Mucosa 0006920 526 681 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990921 192373 0.973927 0.991477 0.817531 24088 1 76 0.00277271 210 0 9.13043e+07 0.0249989 442497 9.20892e+07 5.83548e+06 24115 4.54451e+07 0 0.156396 0.991477 0.810563 9.13043e+07 0.00339836 2.04197e+07 1.3035e+07 2.054e+07 247 2.04958e+07 1.74671e+07 0.00308536 2.05139e+07 50.022 0.00480509 0.992033 0 50.1469 GTEX-14PHY-0726-SM-5YY8X 2 B1 6 pieces; well trimmed 8.5 Esophagus Esophagus - Muscularis 0004648 532 675 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991803 225835 0.974656 0.993048 0.8371 23335 1 76 0.00260537 284 0 1.05036e+08 0.024997 498524 1.05772e+08 4.79808e+06 23358 5.22933e+07 0 0.137555 0.993048 0.831281 1.05036e+08 0.00324202 2.28021e+07 8.70179e+06 2.29341e+07 303 2.28826e+07 2.01896e+07 0.00292329 2.29801e+07 50.1063 0.00471322 0.994294 0 50.1443 GTEX-14PHY-0926-SM-5ZZWL 2 B1 6 pieces; mucosa intact, but cells partially autolyzed; no muscularis 7.9 Stomach Stomach 0000945 538 669 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993739 164402 0.973932 0.994992 0.812565 23309 1 76 0.0021495 170 0 7.498e+07 0.02572 305572 7.53574e+07 7.12887e+06 23334 3.73694e+07 0 0.161368 0.994992 0.808495 7.498e+07 0.00320711 1.63955e+07 6.37774e+06 1.6563e+07 178 1.6508e+07 1.34461e+07 0.00267764 1.65391e+07 50.0471 0.00405497 0.996245 0 50.2541 GTEX-14PHY-1026-SM-62LEV 1 B1 2 pieces 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 540 667 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987306 407092 0.977446 0.992001 0.833396 23209 1 76 0.00279113 205 0 8.72974e+07 0.0222237 242107 8.80013e+07 5.98962e+06 23231 4.33412e+07 0 0.14405 0.992001 0.82673 8.72974e+07 0.00378249 1.91408e+07 7.65785e+06 1.92964e+07 212 1.93651e+07 1.61041e+07 0.00328446 1.9455e+07 50.1158 0.00275117 0.996695 0 50.2024 GTEX-14PHY-1126-SM-664OR 1 B1 2 pieces; 40% internal fat in 1 piece 6.8 Pancreas Pancreas 0001150 541 666 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992163 338304 0.9768 0.99328 0.830663 22970 1 76 0.00264091 200 0 1.16219e+08 0.0228195 267129 1.17005e+08 7.4276e+06 22996 5.78792e+07 0 0.146137 0.99328 0.825081 1.16219e+08 0.0034875 2.65355e+07 2.69409e+07 2.69244e+07 239 2.68089e+07 3.13675e+07 0.00306373 2.67837e+07 49.9764 0.00228305 0.994397 0 50.3637 GTEX-14PHY-1226-SM-5ZZWK 1 B1 6 pieces; up to 1 mm subcutaneous fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 542 665 BP-49102 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993188 141567 0.972299 0.994558 0.803545 22483 1 76 0.00229737 149 0 6.40353e+07 0.0274911 404770 6.43857e+07 5.86899e+06 22505 3.19139e+07 0 0.168754 0.994558 0.799172 6.40353e+07 0.00354891 1.4084e+07 8.74856e+06 1.41802e+07 154 1.41298e+07 1.01723e+07 0.00292228 1.4221e+07 50.1609 0.00628665 0.995927 0 50.1702 GTEX-14PHY-1926-SM-5YY95 1 B1 2 pieces; atrophic ductal & lobular units; 40 & 60% fat content 6.5 Breast Breast - Mammary Tissue 0008367 566 641 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991227 189937 0.970193 0.992274 0.814323 25054 1 76 0.00300263 277 0 9.98543e+07 0.0287613 316321 1.00632e+08 4.34468e+06 25085 4.96731e+07 0 0.15587 0.992274 0.808032 9.98543e+07 0.00366113 2.19098e+07 1.05486e+07 2.21184e+07 275 2.20413e+07 1.7289e+07 0.00333153 2.20941e+07 50.0598 0.00314335 0.993321 0 50.2369 GTEX-14PHY-2626-SM-62LF8 1 B1 2 very small 1 mm nerves with excessive (60 & 50%) external fat 6.6 Nerve Nerve - Tibial 0001323 595 612 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987162 174879 0.973443 0.990894 0.801616 23063 1 76 0.00287859 156 0 7.61793e+07 0.0262959 304459 7.68794e+07 5.39934e+06 23087 3.78578e+07 0 0.171827 0.990894 0.794317 7.61793e+07 0.00358374 1.66547e+07 6.86628e+06 1.67953e+07 171 1.67914e+07 1.33887e+07 0.00322984 1.69231e+07 50.1953 0.00396022 0.994626 0 50.2101 GTEX-14PHY-2726-SM-62LE2 1 B1 2 pieces; well trimmed 7.4 Blood Vessel Artery - Tibial 0007610 596 611 BP-49089 RNA Extraction from Paxgene-derived Lysate Plate Based 02/04/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989689 183184 0.97786 0.992827 0.832469 22715 1 76 0.00278894 215 0 9.03031e+07 0.0217459 218500 9.09555e+07 6.86484e+06 22742 4.49155e+07 0 0.145391 0.992827 0.826498 9.03031e+07 0.00328401 1.98071e+07 7.58976e+06 1.9947e+07 244 1.99819e+07 1.81757e+07 0.00303569 2.00323e+07 50.063 0.00240227 0.995965 0 50.1759 GTEX-14PHY-5001-SM-AN43I B1 Heart Heart - Left Ventricle 0006566 481 ChIP-Seq GTEX-14PHY-5019-SM-AN43N B1 Muscle Muscle - Skeletal 0011907 594 ChIP-Seq GTEX-14PII-0004-SM-5GYE5 C1 Blood Whole Blood 0013756 433 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PII-0004-SM-7DROO C1 Blood Whole Blood 0013756 433 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6341,LCSET-6909 03/06/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PII-0005-SM-7RHFV C1 8.2 Blood Whole Blood 0013756 433 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.961924 476974 0.979197 0.963667 0.81011 17185 1 76 0.00242156 184 0 1.07574e+08 0.0191674 194803 1.1163e+08 9.50645e+06 17188 5.35344e+07 0 0.169087 0.963667 0.780677 1.07574e+08 0.00446484 2.54513e+07 1.82539e+08 2.54431e+07 208 2.54704e+07 2.90783e+07 0.00344135 2.56381e+07 50.1641 0.00174508 0.96541 0 49.9919 GTEX-14PII-0226-SM-6EU1T 0 C1 6 pieces, minimal adherent fat, squamous epithelium is ~60 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 613 844 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452,LCSET-6068 08/20/2014 TruSeq.v1 RNASEQ 0.989292 373698 0.975681 0.991629 0.824122 25208 1 76 0.00285353 433 0 1.53225e+08 0.0239583 798043 1.54518e+08 1.7037e+07 25252 7.62331e+07 0 0.151559 0.991629 0.817224 1.53225e+08 0.00401967 3.31482e+07 1.88509e+07 3.33343e+07 381 3.33265e+07 2.79404e+07 0.00343523 3.34983e+07 50.1285 0.00516473 0.993967 0 50.1399 GTEX-14PII-0326-SM-6LLIQ 0 C1 2 pieces, fascia/vascular tissue is ~20%, rep delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 615 843 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977945 215276 0.975524 0.986781 0.8234 22826 1 76 0.00251667 167 0 7.43798e+07 0.024132 407025 7.53763e+07 6.19211e+06 22849 3.67653e+07 0 0.152125 0.986781 0.812515 7.43798e+07 0.00405044 1.62462e+07 7.18954e+06 1.62372e+07 177 1.64817e+07 1.32903e+07 0.00327669 1.66298e+07 50.2236 0.00539991 0.995616 0 49.9861 GTEX-14PII-0426-SM-6LLIR 0 C1 2 pieces, no adherent fat, clean specimens 6.9 Nerve Nerve - Tibial 0001323 629 830 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979025 207372 0.968218 0.98688 0.756457 24872 1 76 0.00251768 232 0 9.39597e+07 0.0314488 234087 9.52088e+07 8.3608e+06 24923 4.64667e+07 0 0.211762 0.98688 0.746532 9.39597e+07 0.00383859 2.0596e+07 8.28016e+06 2.0507e+07 230 2.07653e+07 1.52645e+07 0.00317288 2.10579e+07 50.3498 0.00245867 0.994735 0 49.8916 GTEX-14PII-0526-SM-6EU2A 0 C1 2 pieces, no atherosis, clean specimens 8.3 Blood Vessel Artery - Tibial 0007610 630 830 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991147 155243 0.974282 0.992809 0.835459 21068 1 76 0.00406984 129 0 6.30233e+07 0.0253423 255325 6.34798e+07 6.03162e+06 21089 3.13679e+07 0 0.138823 0.992809 0.829451 6.30233e+07 0.00423744 1.35104e+07 5.71547e+06 1.35911e+07 135 1.35544e+07 1.23925e+07 0.0041535 1.3648e+07 50.1721 0.00402215 0.99447 0 50.149 GTEX-14PII-0626-SM-69LPY 0 C1 2 pieces, less than ~5% interstitial fat/vascular elements, rep delineated 8.4 Muscle Muscle - Skeletal 0011907 633 829 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.994178 176194 0.980156 0.995343 0.857267 20687 1 76 0.00169524 161 0 7.66548e+07 0.0195926 754634 7.70135e+07 4.55087e+06 20704 3.82202e+07 0 0.122889 0.995343 0.853275 7.66548e+07 0.00242453 1.65821e+07 7.64594e+06 1.65894e+07 191 1.65412e+07 1.55685e+07 0.00205946 1.67093e+07 50.2528 0.00979873 0.996509 0 50.0111 GTEX-14PII-0726-SM-6EU2B 0 C1 6 pieces, minimal adherent fat; squamous mucosa is ~60-70 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 651 811 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991233 117864 0.973607 0.992599 0.79509 22545 1 76 0.00421547 154 0 6.99584e+07 0.0261699 431977 7.048e+07 6.87188e+06 22571 3.48253e+07 0 0.178518 0.992599 0.789205 6.99584e+07 0.00440559 1.53475e+07 7.49296e+06 1.53722e+07 155 1.53109e+07 1.11002e+07 0.0043104 1.5507e+07 50.3181 0.00612908 0.993965 0 50.0402 GTEX-14PII-0826-SM-6871S 1 C1 2 pieces, no abnormalities; small colloid cyst (~1mm) 7.3 Thyroid Thyroid 0002046 661 802 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986556 314820 0.967464 0.987472 0.787228 22774 1 76 0.00229503 134 0 6.27997e+07 0.0322121 151306 6.35965e+07 3.47327e+06 22802 3.12329e+07 0 0.180236 0.987472 0.777365 6.27997e+07 0.00304331 1.37767e+07 7.48154e+06 1.38252e+07 145 1.37863e+07 1.14079e+07 0.00266882 1.38767e+07 50.1634 0.00237916 0.988388 0 50.0878 GTEX-14PII-1026-SM-5ZZVW 1 C1 2 pieces, no abnormalities 7.6 Heart Heart - Atrial Appendage 0006631 667 797 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993245 218035 0.980642 0.994471 0.790404 22158 1 76 0.00209701 158 0 7.93372e+07 0.019081 1.99222e+06 7.97783e+07 7.12426e+06 22180 3.95359e+07 0 0.190237 0.994471 0.786034 7.93372e+07 0.00318706 1.72162e+07 9.0778e+06 1.72711e+07 191 1.72591e+07 1.3082e+07 0.00264136 1.73173e+07 50.0842 0.024972 0.995697 0 50.0797 GTEX-14PJ2-0002-SM-5GYE2 C1 Blood Whole Blood 0013756 290 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJ2-0002-SM-7DROD C1 Blood Whole Blood 0013756 290 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6341,LCSET-6909 03/06/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJ2-0005-SM-9JGFU C1 9 Blood Whole Blood 0013756 290 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992165 690799 0.970712 0.993378 0.742251 21011 1 76 0.00252482 272 0 1.16756e+08 0.028535 353723 1.17534e+08 5.82141e+06 21039 5.81541e+07 0 0.228461 0.993378 0.737336 1.16756e+08 0.00353374 2.62054e+07 6.78748e+07 2.64025e+07 271 2.64489e+07 2.17723e+07 0.00302866 2.63121e+07 49.8704 0.00300953 0.994591 0 50.1873 GTEX-14PJ2-0226-SM-6LLH4 0 C1 2 pieces; one piece fragmented and contains ~10% of fibrovascular component and a few adnexal ducts (outlined) 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 420 1412 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976933 194157 0.975116 0.986073 0.808923 23895 1 76 0.0024603 214 0 8.96251e+07 0.0245531 374554 9.08909e+07 7.7515e+06 23923 4.42784e+07 0 0.166193 0.986073 0.797657 8.96251e+07 0.00397099 1.95736e+07 8.19115e+06 1.95559e+07 234 1.98353e+07 1.55455e+07 0.00320864 2.00799e+07 50.3064 0.00412092 0.995213 0 49.9774 GTEX-14PJ2-0326-SM-6EU2Q 0 C1 2 pieces; ~5% internal fat 6.2 Muscle Muscle - Skeletal 0011907 424 1408 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.99258 157741 0.980165 0.99394 0.852995 20087 1 76 0.0040385 129 0 6.72695e+07 0.019604 853663 6.76797e+07 6.63733e+06 20095 3.35221e+07 0 0.12717 0.99394 0.847825 6.72695e+07 0.00396562 1.4653e+07 8.86814e+06 1.47313e+07 153 1.46502e+07 1.20381e+07 0.00400211 1.48298e+07 50.3046 0.0126133 0.995299 0 50.1331 GTEX-14PJ2-0626-SM-6LLII 0 C1 6 pieces; hair bearing skin well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 451 1383 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978194 162946 0.973155 0.986153 0.768448 24383 1 76 0.00261287 177 0 7.70591e+07 0.0265666 563733 7.81411e+07 7.12648e+06 24414 3.80868e+07 0 0.204707 0.986153 0.757807 7.70591e+07 0.00397915 1.68426e+07 7.56965e+06 1.67854e+07 171 1.6999e+07 1.25614e+07 0.00329049 1.72218e+07 50.3256 0.00721429 0.994111 0 49.915 GTEX-14PJ2-1026-SM-6EU1M 0 C1 2 pieces; interstitial fibrosis with scarring and small amount of internal fat 5.9 Heart Heart - Left Ventricle 0006566 472 1364 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991179 146138 0.981687 0.992749 0.856809 20070 1 76 0.00434603 263 0 7.4941e+07 0.018222 6.63108e+06 7.54884e+07 7.22705e+06 20076 3.73326e+07 0 0.124877 0.992749 0.850596 7.4941e+07 0.0043966 1.64474e+07 2.0433e+07 1.69494e+07 275 1.67076e+07 5.00059e+06 0.00437127 1.68152e+07 50.1604 0.0878423 0.994318 0 50.7516 GTEX-14PJ2-1126-SM-69LOD 0 C1 2 pieces; ~ 10% of internal fat 6.4 Heart Heart - Atrial Appendage 0006631 473 1364 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993475 235878 0.978524 0.994828 0.806696 21782 1 76 0.00196811 266 0 8.76787e+07 0.0213019 4.25186e+06 8.81346e+07 5.01945e+06 21807 4.36968e+07 0 0.171827 0.994828 0.802524 8.76787e+07 0.00278763 1.91857e+07 1.43796e+07 1.90756e+07 305 1.90309e+07 1.04972e+07 0.00237732 1.93411e+07 50.4041 0.0482428 0.996181 0 49.8562 GTEX-14PJ2-1226-SM-62LFE 1 C1 6 pieces; atherosclerotic plaque with focal superficial thrombosis (outlined) 7.4 Blood Vessel Artery - Aorta 0001496 474 1363 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987415 199579 0.970148 0.990635 0.771531 22794 1 76 0.00295801 142 0 7.16289e+07 0.0294488 117659 7.2306e+07 4.62095e+06 22818 3.55836e+07 0 0.198618 0.990635 0.764305 7.16289e+07 0.00344177 1.54335e+07 6.69248e+06 1.5547e+07 151 1.55836e+07 1.26116e+07 0.00319911 1.56088e+07 50.0404 0.00162724 0.993855 0 50.1832 GTEX-14PJ2-1426-SM-62LFF 0 C1 2 pieces; mature adipose tissue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 477 1361 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.98608 244325 0.975039 0.990598 0.813095 23328 1 76 0.00281867 201 0 8.30029e+07 0.0246681 786688 8.37906e+07 6.16568e+06 23351 4.12163e+07 0 0.161944 0.990598 0.805451 8.30029e+07 0.00384763 1.81364e+07 9.44432e+06 1.83546e+07 203 1.84013e+07 1.4051e+07 0.00333081 1.84380e+07 50.0499 0.00938873 0.995116 0 50.2989 GTEX-14PJ2-1526-SM-686Z4 1 C1 2 pieces; well preserevd parenchyma and Langerhans islets (rep. outlined); minimal fat 5.8 Pancreas Pancreas 0001150 479 1360 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.987415 286037 0.964816 0.988103 0.76373 22963 1 76 0.00250312 116 0 7.55383e+07 0.0350363 579863 7.64478e+07 4.10504e+06 22998 3.75946e+07 0 0.201086 0.988103 0.754644 7.55383e+07 0.00316947 1.69555e+07 1.88457e+07 1.71091e+07 129 1.7013e+07 1.71799e+07 0.00283606 1.71105e+07 50.143 0.00758508 0.988791 0 50.2255 GTEX-14PJ2-2026-SM-6AJAQ 1 C1 2 pieces; spermatogenesis present; focal fibrosis and sclerosis of tubules (outlined) 5.8 Testis Testis 0000473 487 1354 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989452 269830 0.917256 0.991868 0.704686 32393 1 76 0.00212099 149 0 7.03254e+07 0.0824339 706239 7.0902e+07 5.10463e+06 32445 3.50037e+07 0 0.212569 0.991868 0.698956 7.03254e+07 0.00318888 1.43251e+07 1.14057e+07 1.44187e+07 142 1.44642e+07 1.12078e+07 0.00265364 1.44291e+07 49.9393 0.00996077 0.994284 0 50.1629 GTEX-14PJ2-2126-SM-5YY96 0 C1 2 pieces; fibromuscular stroma only 6 Prostate Prostate 0002367 489 1352 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.988614 344695 0.95844 0.989703 0.744933 25773 1 76 0.00278254 208 0 9.67153e+07 0.0413283 990258 9.77215e+07 4.26427e+06 25815 4.80982e+07 0 0.213508 0.989703 0.737262 9.67153e+07 0.00351476 2.08648e+07 1.32072e+07 2.09736e+07 244 2.08973e+07 1.34223e+07 0.00314825 2.10541e+07 50.1868 0.0101335 0.990793 0 50.13 GTEX-14PJ2-2726-SM-5ZZVZ 1 C1 6 pieces; well trimmed 5.8 Esophagus Esophagus - Muscularis 0004648 499 1344 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.978658 271815 0.9662 0.980211 0.78905 23115 1 76 0.00236911 154 0 6.98102e+07 0.0335693 1.02918e+06 7.12196e+07 6.39509e+06 23139 3.47512e+07 0 0.17715 0.980211 0.773435 6.98102e+07 0.00344304 1.50161e+07 8.5553e+06 1.51979e+07 168 1.51407e+07 1.04984e+07 0.00290522 1.51756e+07 50.0576 0.0144508 0.981765 0 50.3007 GTEX-14PJ2-2826-SM-6EU1N 1 C1 6 pieces; well trimmed 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 500 1343 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.987911 147646 0.969328 0.9896 0.77075 22883 1 76 0.00434949 131 0 6.845e+07 0.0304738 1.44828e+06 6.91694e+07 7.01663e+06 22910 3.40556e+07 0 0.198578 0.9896 0.762734 6.845e+07 0.00447182 1.50305e+07 6.91434e+06 1.51344e+07 154 1.50693e+07 8.62916e+06 0.00441055 1.52081e+07 50.2292 0.0209382 0.991288 0 50.1722 GTEX-14PJ3-0004-SM-5GYE1 B1 Blood Whole Blood 0013756 -116 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJ3-0004-SM-7DROK B1 Blood Whole Blood 0013756 -116 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6341 03/05/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJ3-0005-SM-9JGFT B1 7.4 Blood Whole Blood 0013756 -116 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.989355 1.03807e+06 0.958061 0.990566 0.81355 19223 1 76 0.00230114 377 0 1.28834e+08 0.0414661 441853 1.30061e+08 6.48389e+06 19239 6.41979e+07 0 0.144511 0.990566 0.805875 1.28834e+08 0.00356363 2.82778e+07 8.2352e+07 2.86612e+07 346 2.86464e+07 2.77254e+07 0.00293161 2.84546e+07 49.8321 0.00339729 0.991776 0 50.3367 GTEX-14PJ3-0126-SM-69LQP 0 B1 2 pieces; one is up to 30% fat/vessels, second includes smaller portion of fat/vessels/skeletal muscle 7.6 Thyroid Thyroid 0002046 151 669 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992359 178686 0.970453 0.993596 0.78629 23216 1 76 0.00210981 141 0 6.90229e+07 0.0288496 172811 6.94678e+07 4.32576e+06 23240 3.43858e+07 0 0.184163 0.993596 0.781255 6.90229e+07 0.00285868 1.52806e+07 6.88427e+06 1.53059e+07 155 1.52771e+07 1.19779e+07 0.00248378 1.53883e+07 50.1812 0.00248764 0.994832 0 50.0412 GTEX-14PJ3-0226-SM-6EU37 1 B1 6 pieces; mild atherosis, attached adventitia 6.8 Blood Vessel Artery - Aorta 0001496 153 667 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991614 115648 0.975621 0.992943 0.843897 21593 1 76 0.00406387 141 0 7.12488e+07 0.0240208 253993 7.17552e+07 7.0689e+06 21611 3.54807e+07 0 0.131725 0.992943 0.837941 7.12488e+07 0.00411131 1.5326e+07 5.0775e+06 1.54069e+07 153 1.53259e+07 1.36009e+07 0.00408756 1.54975e+07 50.2784 0.00353972 0.994273 0 50.1317 GTEX-14PJ3-0426-SM-6LLHF 1 B1 2 pieces; one piece is ~40% fat (predominantly attached), fibrosis with a relative increase in islets 7.7 Pancreas Pancreas 0001150 161 659 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978753 170355 0.978147 0.98733 0.861135 21588 1 76 0.00254328 108 0 8.32501e+07 0.0216218 154225 8.43184e+07 7.66125e+06 21601 4.11872e+07 0 0.117012 0.98733 0.850224 8.32501e+07 0.00412256 1.91149e+07 2.6132e+07 1.92686e+07 125 1.95116e+07 2.61716e+07 0.00332606 1.96116e+07 50.1278 0.00182908 0.995907 0 50.2001 GTEX-14PJ3-0626-SM-6UGC5 0 B1 6 pieces; well trimmed, few clusters of submucosal glands (some marked) 8.9 Esophagus Esophagus - Mucosa 0006920 174 646 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-6025 09/09/2014 TruSeq.v1 RNASEQ 0.989937 300424 0.97468 0.991814 0.826439 23581 1 76 0.00345227 211 0 9.57137e+07 0.0249762 479670 9.65037e+07 9.15314e+06 23598 4.76442e+07 0 0.148241 0.991814 0.819673 9.57137e+07 0.00472609 2.1325e+07 1.07101e+07 2.13736e+07 241 2.14216e+07 1.87464e+07 0.00408798 2.14514e+07 50.0347 0.00497048 0.99369 0 50.0569 GTEX-14PJ3-0626-SM-7KFRZ 0 B1 6 pieces; well trimmed, few clusters of submucosal glands (some marked) 8.9 Esophagus Esophagus - Mucosa 0006920 174 646 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.992678 316966 0.976039 0.994254 0.841504 22713 1 76 0.00291574 202 0 8.40891e+07 0.0236024 394543 8.45751e+07 6.2894e+06 22729 4.18525e+07 0 0.134535 0.994254 0.836669 8.40891e+07 0.00287387 1.86276e+07 1.04191e+07 1.88954e+07 206 1.88722e+07 1.66162e+07 0.00289484 1.87816e+07 49.8796 0.004665 0.995829 0 50.3568 GTEX-14PJ3-0726-SM-69LQE 0 B1 2 pieces 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 178 642 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993967 161496 0.978737 0.995124 0.846869 22554 1 76 0.00190428 210 0 7.97083e+07 0.0209676 389175 8.00989e+07 4.94939e+06 22572 3.97353e+07 0 0.131868 0.995124 0.84274 7.97083e+07 0.00264298 1.76424e+07 7.90292e+06 1.78016e+07 220 1.77095e+07 1.46007e+07 0.0022732 1.78241e+07 50.1613 0.00485868 0.996281 0 50.2246 GTEX-14PJ3-0826-SM-6AJBR 0 B1 3 pieces; well trimmed 7.5 Esophagus Esophagus - Muscularis 0004648 180 640 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992345 145488 0.980677 0.994558 0.867727 21142 1 76 0.00195199 171 0 7.2639e+07 0.0190395 348588 7.30364e+07 5.21619e+06 21150 3.61785e+07 0 0.11295 0.994558 0.863004 7.2639e+07 0.00288492 1.56417e+07 7.05432e+06 1.58468e+07 184 1.57628e+07 1.43126e+07 0.00241742 1.58793e+07 50.1842 0.0047728 0.996771 0 50.3258 GTEX-14PJ3-0926-SM-69LQG 1 B1 3 pieces; muscularis only, no mucosa (also target) 5.8 Colon Colon - Transverse 0001157 185 635 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993832 252026 0.976373 0.995128 0.840328 21979 1 76 0.00186192 165 0 7.03895e+07 0.023366 487877 7.07341e+07 4.17076e+06 21991 3.5071e+07 0 0.136045 0.995128 0.836233 7.03895e+07 0.00273454 1.54116e+07 6.17715e+06 1.55032e+07 177 1.54102e+07 1.20811e+07 0.00229766 1.55936e+07 50.2958 0.00689733 0.996424 0 50.1481 GTEX-14PJ3-1126-SM-5ZZVX 1 B1 6 pieces; 5-10% residual attached fat 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 191 629 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992686 165018 0.973221 0.994265 0.827215 21514 1 76 0.00214659 138 0 5.74043e+07 0.0265943 448018 5.77354e+07 4.99638e+06 21532 2.86017e+07 0 0.146006 0.994265 0.822471 5.74043e+07 0.00348016 1.26999e+07 6.56726e+06 1.27673e+07 146 1.26938e+07 9.11889e+06 0.00281232 1.28637e+07 50.3325 0.00775985 0.995844 0 50.1323 GTEX-14PJ3-1226-SM-5ZZVY 1 B1 6 pieces; predominantly muscularis with residual submucosa and strip of mucosa in one piece (marked) 7.1 Colon Colon - Sigmoid 0001159 193 627 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.992387 225917 0.976816 0.994086 0.852254 23915 1 76 0.0020209 180 0 7.17247e+07 0.0228793 456219 7.21514e+07 6.94911e+06 23931 3.57344e+07 0 0.124562 0.994086 0.847214 7.17247e+07 0.00321506 1.55836e+07 6.81265e+06 1.57441e+07 180 1.5691e+07 1.31171e+07 0.00261696 1.57513e+07 50.0958 0.00632308 0.995786 0 50.2562 GTEX-14PJ3-1326-SM-664O7 1 B1 6 pieces; mucosa/submucosa with adequate lymphoid tissue in 3 of 6 sections 6.9 Small Intestine Small Intestine - Terminal Ileum 0001211 196 624 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.99158 201225 0.974911 0.992451 0.809919 24418 1 76 0.00252082 274 0 9.24027e+07 0.0247038 691554 9.31056e+07 5.72768e+06 24448 4.60096e+07 0 0.164992 0.992451 0.803805 9.24027e+07 0.00330684 2.04367e+07 1.17336e+07 2.0673e+07 274 2.05467e+07 1.39950e+07 0.00291349 2.06327e+07 50.1043 0.00742763 0.993321 0 50.2874 GTEX-14PJ3-1426-SM-664O8 1 B1 6 pieces; well preserved mucosa and submucosa, no muscularis 6.6 Stomach Stomach 0000945 199 621 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.982412 219114 0.982123 0.983486 0.853999 23209 1 76 0.00246357 446 0 1.09305e+08 0.0175175 1.09602e+06 1.1114e+08 7.02997e+06 23238 5.4424e+07 0 0.128125 0.983486 0.839896 1.09305e+08 0.00337059 2.50928e+07 1.03335e+08 2.54162e+07 348 2.53356e+07 2.83373e+07 0.00291658 2.5295e+07 49.96 0.00986164 0.98456 0 50.3202 GTEX-14PJ3-1526-SM-664O9 0 B1 2 pieces; excellent specimen 8.2 Salivary Gland Minor Salivary Gland 0006330 206 614 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989913 217796 0.973408 0.990616 0.808604 24280 1 76 0.00283345 211 0 8.97672e+07 0.0243532 201494 9.06176e+07 5.52442e+06 24307 4.46101e+07 0 0.164803 0.990616 0.801016 8.97672e+07 0.00362047 2.01168e+07 1.40382e+07 2.01664e+07 251 2.01564e+07 1.61215e+07 0.00322668 2.01881e+07 50.0393 0.00222356 0.991318 0 50.0616 GTEX-14PJ3-1626-SM-664O5 1 B1 2 pieces; spermatogenesis is present 6.7 Testis Testis 0000473 207 613 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991308 355236 0.936864 0.992066 0.743093 34390 1 76 0.00239042 285 0 1.21561e+08 0.0628232 1.6459e+06 1.22533e+08 7.46007e+06 34472 6.0565e+07 0 0.193771 0.992066 0.737197 1.21561e+08 0.0030653 2.56787e+07 1.62999e+07 2.56976e+07 298 2.56927e+07 1.9696e+07 0.0027276 2.57616e+07 50.0669 0.0134323 0.992824 0 50.0184 GTEX-14PJ3-1726-SM-5ZZVH 1 B1 2 pieces 6.8 Prostate Prostate 0002367 225 595 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994695 161140 0.973131 0.995827 0.815471 22500 1 76 0.00203913 167 0 7.56952e+07 0.0265704 588143 7.60124e+07 6.61695e+06 22521 3.77293e+07 0 0.15766 0.995827 0.812068 7.56952e+07 0.00312106 1.62276e+07 6.08317e+06 1.64117e+07 183 1.63056e+07 1.27543e+07 0.00257948 1.6414e+07 50.1656 0.00773746 0.996959 0 50.282 GTEX-14PJ3-1826-SM-62LEX 0 B1 6 pieces; relatively well trimmed, epidermis measures up to 35 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 231 589 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986159 255151 0.968309 0.990318 0.789227 24158 1 76 0.00288251 163 0 7.24751e+07 0.0314597 443805 7.31837e+07 4.83421e+06 24185 3.59922e+07 0 0.179082 0.990318 0.781586 7.24751e+07 0.00397305 1.58895e+07 7.70242e+06 1.59665e+07 164 1.59798e+07 1.20528e+07 0.00342549 1.6158e+07 50.2771 0.00606426 0.994477 0 50.1209 GTEX-14PJ3-1926-SM-62LEY 0 B1 2 pieces; predominantly fat with small portion of fibrous and vascular tissue 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 232 588 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987192 319986 0.972658 0.99107 0.798738 24249 1 76 0.00291254 378 0 1.19288e+08 0.0270939 730198 1.20363e+08 9.05979e+06 24286 5.92666e+07 0 0.17392 0.99107 0.791606 1.19288e+08 0.0035754 2.60743e+07 1.29076e+07 2.63741e+07 364 2.63297e+07 1.84589e+07 0.00324268 2.65398e+07 50.1987 0.00606663 0.994948 0 50.2859 GTEX-14PJ3-2026-SM-5ZZVK 1 B1 2 pieces; from 10-20% internal fat 8.5 Muscle Muscle - Skeletal 0011907 238 582 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994656 171887 0.982711 0.995845 0.861637 21028 1 76 0.00206676 208 0 7.3464e+07 0.0171145 1.21049e+06 7.37706e+07 6.94942e+06 21039 3.66402e+07 0 0.121074 0.995845 0.858057 7.3464e+07 0.00306865 1.62534e+07 1.53897e+07 1.63075e+07 207 1.62004e+07 1.29826e+07 0.00256711 1.64326e+07 50.3558 0.0164088 0.997033 0 50.083 GTEX-14PJ3-2126-SM-5ZZVL 1 B1 2 pieces; one piece includes 25% attachment of fat/extraneous tissue, trivial calcification 8.1 Blood Vessel Artery - Tibial 0007610 239 581 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994339 139908 0.974429 0.99541 0.841357 20689 1 76 0.00198083 143 0 6.86537e+07 0.0252007 279719 6.89703e+07 6.24159e+06 20701 3.42189e+07 0 0.133072 0.99541 0.837495 6.86537e+07 0.00299259 1.46458e+07 4.87108e+06 1.48275e+07 162 1.47281e+07 1.31867e+07 0.00248617 1.48161e+07 50.1489 0.00405564 0.99648 0 50.3082 GTEX-14PJ3-2226-SM-62LFD 0 B1 2 pieces; well trimmed 7.5 Nerve Nerve - Tibial 0001323 241 579 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986788 207111 0.969184 0.990745 0.77868 23646 1 76 0.00280749 188 0 7.87172e+07 0.0304967 292076 7.94526e+07 6.00778e+06 23681 3.91078e+07 0 0.190505 0.990745 0.771473 7.87172e+07 0.00346777 1.72979e+07 6.55716e+06 1.74485e+07 178 1.74826e+07 1.31984e+07 0.00313632 1.75498e+07 50.0959 0.00367611 0.994702 0 50.2167 GTEX-14PJ4-0004-SM-5GYE3 B1 Blood Whole Blood 0013756 -123 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJ4-0004-SM-7DROM B1 Blood Whole Blood 0013756 -123 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJ4-0006-SM-7RHFY B1 8.3 Blood Whole Blood 0013756 -123 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.983325 335875 0.97847 0.985402 0.842376 18234 1 76 0.00243334 198 0 9.41442e+07 0.0209685 349362 9.55388e+07 9.02133e+06 18243 4.68712e+07 0 0.136094 0.985402 0.830079 9.41442e+07 0.00427183 2.13599e+07 7.43115e+07 2.15473e+07 207 2.15649e+07 2.261e+07 0.00335065 2.15261e+07 49.9551 0.00365675 0.987481 0 50.2185 GTEX-14PJ4-0126-SM-62LEZ 1 B1 2 pieces; mature adipose tissue, central defects (?poor fixation) 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 96 488 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989884 152948 0.978897 0.992934 0.845155 20701 1 76 0.00259396 141 0 6.32536e+07 0.0208315 325417 6.37037e+07 4.46888e+06 20712 3.14734e+07 0 0.133743 0.992934 0.839183 6.32536e+07 0.00308268 1.38739e+07 5.80333e+06 1.39881e+07 149 1.39831e+07 1.19709e+07 0.00283757 1.40552e+07 50.1285 0.00510829 0.995985 0 50.2049 GTEX-14PJ4-0226-SM-5YY92 1 B1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 97 487 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990409 215392 0.971388 0.991883 0.768478 23185 1 76 0.00261562 236 0 9.37327e+07 0.0284295 567531 9.44998e+07 4.33857e+06 23219 4.6661e+07 0 0.20291 0.991883 0.76224 9.37327e+07 0.00338166 2.063e+07 1.04315e+07 2.08e+07 243 2.07332e+07 1.5015e+07 0.00299807 2.08346e+07 50.1219 0.00600563 0.993357 0 50.2052 GTEX-14PJ4-0326-SM-664OT 1 B1 2 pieces; adenomatous nodules (outlined) 7.6 Thyroid Thyroid 0002046 99 485 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991608 329450 0.970305 0.992377 0.761521 24636 1 76 0.00227774 276 0 1.19007e+08 0.0294076 524481 1.19921e+08 7.20236e+06 24694 5.92803e+07 0 0.208783 0.992377 0.755717 1.19007e+08 0.00296347 2.62579e+07 1.3597e+07 2.63498e+07 307 2.62619e+07 1.87767e+07 0.00262034 2.64315e+07 50.1609 0.00437355 0.993147 0 50.0874 GTEX-14PJ4-0426-SM-6871F 1 B1 2 pieces; cortex and medulla, small amount of external fat attached to one piece 9 Adrenal Gland Adrenal Gland 0002369 101 483 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992167 534482 0.97676 0.993239 0.826706 22265 1 76 0.00194209 192 0 8.05102e+07 0.022906 1.00721e+06 8.10583e+07 4.26738e+06 22286 4.00745e+07 0 0.150054 0.993239 0.821117 8.05102e+07 0.00260382 1.77823e+07 1.0244e+07 1.7826e+07 204 1.78135e+07 1.37963e+07 0.0022726 1.78712e+07 50.0808 0.0124257 0.99431 0 50.0614 GTEX-14PJ4-0526-SM-6871G 1 B1 2 pieces 7.7 Spleen Spleen 0002106 103 481 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990847 296984 0.966316 0.991726 0.790437 23461 1 76 0.00257476 161 0 7.94515e+07 0.0320928 363530 8.01143e+07 4.36624e+06 23490 3.95275e+07 0 0.17588 0.991726 0.783897 7.94515e+07 0.00315007 1.7528e+07 1.05745e+07 1.76572e+07 200 1.7616e+07 1.25176e+07 0.00286216 1.76354e+07 50.0275 0.00453764 0.992606 0 50.1835 GTEX-14PJ4-0626-SM-6AJBS 0 B1 2 pieces; thick walled vessels, emphysematous-like changes 7.4 Lung Lung 0008952 107 477 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991673 237306 0.977145 0.993923 0.830988 22911 1 76 0.00204982 143 0 6.88093e+07 0.0223742 235365 6.923e+07 4.83327e+06 22929 3.4254e+07 0 0.146157 0.993923 0.825939 6.88093e+07 0.0029474 1.52639e+07 5.75837e+06 1.53945e+07 158 1.53999e+07 1.38725e+07 0.00249759 1.54053e+07 50.0087 0.00339976 0.996173 0 50.2129 GTEX-14PJ4-0726-SM-6872E 1 B1 2 pieces; well preserved parenchyma with prominent islets, periductal fibrosis and focal interstitial fibrosis with relative increase of islets, ~10% internal fat 7.5 Pancreas Pancreas 0001150 112 472 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993407 308055 0.976836 0.994171 0.838836 22660 1 76 0.00208718 203 0 1.11008e+08 0.0228537 232800 1.11659e+08 6.21141e+06 22687 5.53402e+07 0 0.138001 0.994171 0.833946 1.11008e+08 0.00261069 2.55137e+07 2.51815e+07 2.57136e+07 221 2.56262e+07 3.14004e+07 0.00234874 2.56923e+07 50.0644 0.00208492 0.994935 0 50.1952 GTEX-14PJ4-0826-SM-6LLH5 1 B1 6 pieces; atherosclerosis and atheroma with cholesterol clefts (outlined) 5.9 Blood Vessel Artery - Aorta 0001496 114 470 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.973507 190600 0.975888 0.983843 0.849081 22807 1 76 0.00236229 209 0 9.05271e+07 0.02378 313670 9.20138e+07 7.68668e+06 22825 4.46754e+07 0 0.126807 0.983843 0.835362 9.05271e+07 0.0040482 1.96182e+07 6.98381e+06 1.96427e+07 239 1.99413e+07 1.73679e+07 0.00319639 2.02239e+07 50.3517 0.00340894 0.994179 0 50.0313 GTEX-14PJ4-0926-SM-5YY98 0 B1 2 pieces; ~10% internal fat 8.6 Heart Heart - Atrial Appendage 0006631 118 466 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991852 215273 0.979959 0.993067 0.847086 21472 1 76 0.00247724 267 0 9.8589e+07 0.0197888 2.39467e+06 9.92773e+07 4.08305e+06 21490 4.91218e+07 0 0.132873 0.993067 0.841213 9.8589e+07 0.00302491 2.11542e+07 2.00235e+07 2.149e+07 310 2.12277e+07 1.52869e+07 0.00275074 2.1519e+07 50.3408 0.024121 0.994281 0 50.3938 GTEX-14PJ4-1026-SM-6AJ97 1 B1 2 pieces; severe calcific atherosclerosis with narrowing of the lumen (>75%), surrounding adventitia and external fat with nerves measures up to 1mm 7.3 Blood Vessel Artery - Coronary 0001621 126 458 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991187 185544 0.975738 0.993853 0.858631 21545 1 76 0.00191277 161 0 7.09264e+07 0.0239154 265103 7.1365e+07 4.86642e+06 21556 3.52877e+07 0 0.117107 0.993853 0.853353 7.09264e+07 0.00327223 1.53681e+07 6.01847e+06 1.5534e+07 179 1.54475e+07 1.37295e+07 0.00259068 1.56399e+07 50.3094 0.00371475 0.996519 0 50.2685 GTEX-14PJ4-1126-SM-5YY91 1 B1 2 pieces; interstitial fibrosis and scar (outlined) 8.8 Heart Heart - Left Ventricle 0006566 129 455 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990766 195330 0.9855 0.992127 0.85829 20893 1 76 0.00250365 270 0 1.05604e+08 0.0142358 2.74975e+06 1.06442e+08 4.32635e+06 20904 5.26223e+07 0 0.12721 0.992127 0.851533 1.05604e+08 0.0032328 2.31296e+07 3.25468e+07 2.32374e+07 317 2.30285e+07 1.70178e+07 0.00286773 2.34592e+07 50.4633 0.0258334 0.993489 0 50.1162 GTEX-14PJ4-1226-SM-5YY9U 1 B1 2 pieces; fibromuscular stroma and glandular component 8.2 Prostate Prostate 0002367 134 450 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992115 222895 0.97006 0.993083 0.799004 24474 1 76 0.00251634 209 0 9.16646e+07 0.0296495 356487 9.23031e+07 4.06215e+06 24507 4.5655e+07 0 0.171056 0.993083 0.793478 9.16646e+07 0.00313231 2.00403e+07 1.0802e+07 2.01843e+07 249 2.01168e+07 1.61181e+07 0.00282403 2.01979e+07 50.1006 0.00386214 0.994051 0 50.179 GTEX-14PJ4-1326-SM-5ZZVM 1 B1 6 pieces 8.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 145 439 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994481 154364 0.980147 0.995783 0.859205 21434 1 76 0.001877 222 0 7.75683e+07 0.0194827 523976 7.78968e+07 6.90002e+06 21445 3.86693e+07 0 0.120941 0.995783 0.855582 7.75683e+07 0.00285907 1.68553e+07 6.57347e+06 1.69649e+07 220 1.68922e+07 1.5034e+07 0.00236739 1.70231e+07 50.193 0.00672654 0.997084 0 50.162 GTEX-14PJ4-1426-SM-69LO6 1 B1 8 pieces; some pieces are over-sized 8.5 Esophagus Esophagus - Muscularis 0004648 144 440 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.994381 142357 0.981374 0.995515 0.866057 21288 1 76 0.00175335 210 0 8.02132e+07 0.0183551 579941 8.05746e+07 4.91757e+06 21303 3.99851e+07 0 0.115317 0.995515 0.862173 8.02132e+07 0.00254289 1.77296e+07 7.25461e+06 1.78509e+07 238 1.77555e+07 1.50024e+07 0.00214767 1.79153e+07 50.224 0.00719757 0.99665 0 50.1705 GTEX-14PJ4-1526-SM-664OA 0 B1 6 pieces; well preserved squamous epithelium up to 448 microns in thickness 9.7 Esophagus Esophagus - Mucosa 0006920 151 433 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.989276 255640 0.97832 0.990115 0.847633 22703 1 76 0.00237155 283 0 1.02996e+08 0.0212676 405026 1.04024e+08 6.83282e+06 22718 5.13198e+07 0 0.130686 0.990115 0.839254 1.02996e+08 0.00309421 2.33714e+07 1.63003e+07 2.34136e+07 272 2.33974e+07 2.27362e+07 0.00273258 2.3474e+07 50.0817 0.00389358 0.990954 0 50.0451 GTEX-14PJ4-1626-SM-664OB 1 B1 6 pieces; essentially well preserved gastric mucosa 6.7 Stomach Stomach 0000945 167 417 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.986161 138870 0.986309 0.986808 0.903768 20319 1 76 0.00205655 308 0 8.41982e+07 0.0133424 1.39082e+06 8.53238e+07 5.00731e+06 20324 4.19164e+07 0 0.0825408 0.986808 0.891846 8.41982e+07 0.00298414 1.95399e+07 7.74466e+07 1.98374e+07 233 1.97624e+07 2.45271e+07 0.00252004 1.96772e+07 49.892 0.0163004 0.987455 0 50.3778 GTEX-14PJ4-1726-SM-664OC 1 B1 2 pieces; spermatogenesis present 6.7 Testis Testis 0000473 168 416 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990876 268888 0.944256 0.992014 0.762365 33124 1 76 0.00230749 279 0 1.01997e+08 0.0554501 1.18224e+06 1.02818e+08 6.57383e+06 33189 5.07939e+07 0 0.181891 0.992014 0.756277 1.01997e+08 0.00328052 2.17384e+07 1.34388e+07 2.18375e+07 268 2.18327e+07 1.67715e+07 0.00279344 2.18481e+07 50.0175 0.0114983 0.993152 0 50.1137 GTEX-14PJ4-1826-SM-5YY97 0 B1 6 pieces; well trimmed 7.6 Colon Colon - Sigmoid 0001159 171 413 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990528 220627 0.977778 0.991803 0.845224 23475 1 76 0.00250799 384 0 1.13916e+08 0.0219355 819011 1.14857e+08 5.37384e+06 23500 5.67259e+07 0 0.132554 0.991803 0.838296 1.13916e+08 0.00312569 2.47734e+07 1.14456e+07 2.51e+07 341 2.49707e+07 2.02868e+07 0.00281644 2.50376e+07 50.0669 0.00713067 0.993078 0 50.3275 GTEX-14PJ4-1926-SM-6LLHG 1 B1 6 pieces; essentially well preserved mucosa 8 Colon Colon - Transverse 0001157 172 412 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978458 203547 0.970877 0.986203 0.785151 24251 1 76 0.00283141 280 0 9.5169e+07 0.027615 1.26351e+06 9.65005e+07 8.28183e+06 24292 4.70416e+07 0 0.185726 0.986203 0.774318 9.5169e+07 0.00413346 2.10362e+07 1.38214e+07 2.0998e+07 278 2.1254e+07 1.38179e+07 0.00347732 2.14779e+07 50.262 0.0130933 0.993947 0 49.9546 GTEX-14PJ4-2126-SM-6ETZJ 0 B1 2 pieces; predominantly mature adipose tissue, over-sized specimens with central defect (?poor fixation), one piece is 40% dense fibrous stroma with scattered ductal structures 6.8 Breast Breast - Mammary Tissue 0008367 168 416 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990795 271082 0.978058 0.992258 0.833073 22390 1 76 0.00408954 169 0 7.98798e+07 0.0216657 444275 8.05031e+07 7.91543e+06 22414 3.97811e+07 0 0.144986 0.992258 0.826623 7.98798e+07 0.00412035 1.74914e+07 7.3642e+06 1.76366e+07 188 1.75677e+07 1.40707e+07 0.00410492 1.76757e+07 50.1532 0.00551873 0.993721 0 50.2066 GTEX-14PJ4-2226-SM-6LLIS 1 B1 2 pieces; ~10% fibrovascular component, over-sized specimens with central defects (?poor fixation) 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 254 330 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.97805 151531 0.977432 0.986776 0.830677 22657 1 76 0.00234929 175 0 7.7958e+07 0.0222471 406338 7.90027e+07 6.67333e+06 22678 3.85382e+07 0 0.146755 0.986776 0.819692 7.7958e+07 0.00379569 1.70948e+07 6.56875e+06 1.7077e+07 191 1.7299e+07 1.41357e+07 0.0030661 1.75269e+07 50.3272 0.00514334 0.995501 0 49.974 GTEX-14PJ4-2426-SM-6EU1U 1 B1 2 pieces, over-sized 8.3 Muscle Muscle - Skeletal 0011907 255 329 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989299 273277 0.985726 0.990996 0.888499 18780 1 76 0.0039828 170 0 7.49062e+07 0.0140436 940260 7.55868e+07 7.30590e+06 18785 3.73132e+07 0 0.0972273 0.990996 0.880499 7.49062e+07 0.00400053 1.65047e+07 9.46967e+06 1.65111e+07 180 1.64388e+07 1.49342e+07 0.00399165 1.66991e+07 50.3927 0.0124395 0.992692 0 50.0097 GTEX-14PJ4-2526-SM-6LLIT 1 B1 3 pieces; surrounding fat up to 1mm 6.2 Nerve Nerve - Tibial 0001323 260 324 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976831 153801 0.970489 0.985638 0.753229 23512 1 76 0.00243923 166 0 7.85007e+07 0.0292848 428901 7.96445e+07 6.72341e+06 23544 3.87886e+07 0 0.21726 0.985638 0.742412 7.85007e+07 0.00393665 1.7206e+07 7.50569e+06 1.71569e+07 176 1.73846e+07 1.18306e+07 0.00318125 1.76508e+07 50.3799 0.00538519 0.994445 0 49.9286 GTEX-14PJ4-5004-SM-AN42T B1 Heart Heart - Left Ventricle 0006566 130 ChIP-Seq GTEX-14PJ4-5019-SM-AN42S B1 Muscle Muscle - Skeletal 0011907 255 ChIP-Seq GTEX-14PJ5-0001-SM-5GYE4 B1 Blood Whole Blood 0013756 -7 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJ5-0001-SM-7DROP B1 Blood Whole Blood 0013756 -7 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6341 02/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJ5-0005-SM-9MQLO B1 9 Blood Whole Blood 0013756 -7 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.97673 552597 0.960232 0.979378 0.786339 18692 1 76 0.00598561 102 0 6.16345e+07 0.0390004 113047 6.29323e+07 7.66711e+06 18702 3.06075e+07 0 0.173893 0.979378 0.770123 6.16345e+07 0.00822706 1.36874e+07 4.91901e+07 1.37997e+07 118 1.3864e+07 1.2558e+07 0.0071033 1.3795e+07 49.8752 0.00179633 0.982027 0 50.2043 GTEX-14PJ5-0126-SM-5ZZW1 1 B1 2 pieces, no abnormalities. 1mm nubbin of fibrovascular tissue, delineated 8.2 Thyroid Thyroid 0002046 156 562 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.99487 134912 0.977275 0.996064 0.814259 22904 1 76 0.00200109 162 0 7.82586e+07 0.0224002 208551 7.85679e+07 6.92902e+06 22925 3.90175e+07 0 0.163016 0.996064 0.811054 7.82586e+07 0.00300187 1.71892e+07 6.26891e+06 1.73224e+07 182 1.72781e+07 1.52338e+07 0.00250088 1.73228e+07 50.0645 0.0026544 0.997258 0 50.193 GTEX-14PJ5-0226-SM-5YY99 1 B1 2 pieces, emphysematous changes, moderate congestion 7.9 Lung Lung 0008952 158 560 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992628 205950 0.975622 0.993467 0.810059 24169 1 76 0.00267468 276 0 1.04284e+08 0.0239315 456996 1.0497e+08 4.21942e+06 24205 5.195e+07 0 0.165563 0.993467 0.804767 1.04284e+08 0.00313864 2.32136e+07 8.79146e+06 2.33531e+07 289 2.32986e+07 1.91171e+07 0.00290646 2.33527e+07 50.058 0.0043536 0.994305 0 50.1497 GTEX-14PJ5-0326-SM-664OD 1 B1 2 pieces, no abnormalities 7.5 Spleen Spleen 0002106 160 558 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991384 259182 0.962769 0.99207 0.761324 24756 1 76 0.00273673 205 0 9.36643e+07 0.036535 417989 9.4413e+07 6.03623e+06 24799 4.66087e+07 0 0.201445 0.99207 0.755286 9.36643e+07 0.0035088 2.05408e+07 1.17292e+07 2.06708e+07 250 2.062e+07 1.45895e+07 0.0031225 2.06547e+07 50.042 0.00442724 0.992756 0 50.1578 GTEX-14PJ5-0426-SM-5ZZW2 1 B1 2 pieces, trace fascia 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 162 556 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994741 177283 0.975685 0.995869 0.823947 23070 1 76 0.00202139 206 0 8.27697e+07 0.0240355 761601 8.3113e+07 7.46978e+06 23091 4.12719e+07 0 0.151737 0.995869 0.820544 8.27697e+07 0.00298086 1.82143e+07 9.20033e+06 1.84238e+07 249 1.83291e+07 1.3902e+07 0.00250058 1.84042e+07 50.1023 0.00916344 0.996998 0 50.286 GTEX-14PJ5-0526-SM-664OE 1 B1 6 pieces, squamous mucosa is ~0.4mm, 15-20% thickness 9.2 Esophagus Esophagus - Mucosa 0006920 164 554 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992488 277451 0.976468 0.993456 0.861159 21284 1 76 0.00240309 276 0 9.42091e+07 0.0231699 488620 9.48297e+07 5.92919e+06 21297 4.69086e+07 0 0.115309 0.993456 0.855523 9.42091e+07 0.00342473 2.11215e+07 1.5227e+07 2.13827e+07 272 2.12558e+07 1.88159e+07 0.00291341 2.13432e+07 50.1026 0.00515261 0.994423 0 50.3072 GTEX-14PJ5-0626-SM-6LLIJ 1 B1 6 pieces, target muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 168 550 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.980188 159422 0.977068 0.987995 0.841602 22407 1 76 0.00240982 278 0 8.72359e+07 0.0226391 1.27047e+06 8.82959e+07 7.68708e+06 22427 4.31742e+07 0 0.135466 0.987995 0.831498 8.72359e+07 0.00369092 1.88505e+07 8.36191e+06 1.8931e+07 265 1.91346e+07 1.46834e+07 0.00304531 1.92759e+07 50.1839 0.0143888 0.995801 0 50.1066 GTEX-14PJ5-0826-SM-6AJAR 1 B1 6 pieces, well preserved mucosa ~1mm, 20-30% thickness 7 Stomach Stomach 0000945 176 542 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.988519 163240 0.976184 0.991102 0.808733 22712 1 76 0.00260958 199 0 7.26955e+07 0.0225865 1.11988e+06 7.33481e+07 5.08508e+06 22734 3.61351e+07 0 0.167451 0.991102 0.801537 7.26955e+07 0.00384971 1.6175e+07 2.75836e+07 1.63719e+07 200 1.62726e+07 1.0561e+07 0.00322803 1.64527e+07 50.2751 0.0152681 0.993685 0 50.3024 GTEX-14PJ5-0926-SM-6LLIK 1 B1 6 pieces with colon mucosa up to ~0.35mm, switched with 1025 7.4 Colon Colon - Transverse 0001157 178 540 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976519 225577 0.972465 0.985668 0.801016 23362 1 76 0.00244022 218 0 8.74662e+07 0.0272572 666235 8.8738e+07 7.40113e+06 23388 4.32169e+07 0 0.171449 0.985668 0.789536 8.74662e+07 0.0040024 1.8901e+07 8.13157e+06 1.88144e+07 211 1.90912e+07 1.49862e+07 0.00321406 1.93803e+07 50.3758 0.00750789 0.994818 0 49.8851 GTEX-14PJ5-1426-SM-68718 1 B1 6 pieces, target muscularis, good specimens 9.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 191 527 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.992277 320300 0.977648 0.992953 0.846523 22625 1 76 0.00208849 282 0 1.09624e+08 0.0219162 521220 1.10402e+08 5.39617e+06 22647 5.46611e+07 0 0.131126 0.992953 0.840557 1.09624e+08 0.00258332 2.47108e+07 1.67012e+07 2.48479e+07 304 2.47924e+07 2.37702e+07 0.00233574 2.48411e+07 50.0491 0.00472111 0.993629 0 50.1383 GTEX-14PJ5-1526-SM-6LLIL 0 B1 6 pieces, adherent fat is ~1.5mm in some sections; squamous epithelium is ~30 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 192 526 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975544 190832 0.971245 0.984888 0.812867 23219 1 76 0.00248337 199 0 7.94284e+07 0.028509 683113 8.06472e+07 6.8755e+06 23244 3.92211e+07 0 0.158378 0.984888 0.800583 7.94284e+07 0.00407902 1.72855e+07 8.45932e+06 1.72823e+07 192 1.7538e+07 1.38644e+07 0.00327363 1.77558e+07 50.3085 0.00847039 0.994232 0 49.9955 GTEX-14PJ5-1926-SM-6LLIM 0 B1 2 pieces, no atherosis, no adherent fat, clean specimens 6.1 Blood Vessel Artery - Tibial 0007610 199 519 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976064 186878 0.972064 0.985108 0.817592 22885 1 76 0.00245675 280 0 9.78441e+07 0.0275821 736393 9.93233e+07 8.88446e+06 22918 4.83097e+07 0 0.154472 0.985108 0.805416 9.78441e+07 0.0039537 2.11015e+07 8.14987e+06 2.10937e+07 281 2.13705e+07 1.70877e+07 0.00319835 2.16577e+07 50.3337 0.0074141 0.994152 0 49.9907 GTEX-14PJ5-2026-SM-6LLIN 0 B1 2 pieces, minimal interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 206 512 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979485 213954 0.982151 0.987646 0.878928 20072 1 76 0.00225803 276 0 9.23066e+07 0.0175828 1.57828e+06 9.34612e+07 8.41641e+06 20082 4.56862e+07 0 0.103222 0.987646 0.86807 9.23066e+07 0.00368905 2.00429e+07 9.6408e+06 2.00531e+07 271 2.03628e+07 1.93674e+07 0.00296763 2.04587e+07 50.1175 0.016887 0.995806 0 50.0126 GTEX-14PJ5-5001-SM-AN42L B1 Lung Lung 0008952 159 ChIP-Seq GTEX-14PJ6-0001-SM-5GYEE B1 Blood Whole Blood 0013756 -129 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJ6-0001-SM-7DLF2 B1 Blood Whole Blood 0013756 -129 BP-47754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/27/2013 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJ6-0006-SM-7P8RE B1 8.6 Blood Whole Blood 0013756 -129 BP-47933 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.919243 409340 0.970239 0.951568 0.809195 19590 1 76 0.00390346 118 0 8.1872e+07 0.0285738 285806 8.6039e+07 1.12191e+07 19602 3.94082e+07 0 0.161044 0.951568 0.770005 8.1872e+07 0.0101271 1.80582e+07 7.70494e+07 1.77745e+07 137 1.92598e+07 1.83623e+07 0.00690955 1.93433e+07 50.1081 0.00332182 0.983894 0 49.6042 GTEX-14PJ6-0126-SM-686Z5 1 B1 2 pieces, well preserved cortex 8.6 Adrenal Gland Adrenal Gland 0002369 86 544 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990784 180950 0.977302 0.991499 0.83703 22233 1 76 0.00196848 192 0 7.33868e+07 0.0222683 1.21266e+06 7.4016e+07 3.62735e+06 22251 3.65493e+07 0 0.140272 0.991499 0.829914 7.33868e+07 0.00261111 1.62943e+07 9.97043e+06 1.63706e+07 206 1.62459e+07 1.12904e+07 0.00228956 1.6469e+07 50.341 0.0163838 0.992213 0 50.1169 GTEX-14PJ6-0226-SM-6AJ9K 1 B1 2 pieces, no abnormalities 7 Spleen Spleen 0002106 89 541 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.987475 156463 0.963519 0.990309 0.781607 22779 1 76 0.00328437 139 0 6.46028e+07 0.0322542 367355 6.5235e+07 4.62168e+06 22802 3.19842e+07 0 0.181912 0.990309 0.774032 6.46028e+07 0.00467422 1.4295e+07 1.27644e+07 1.43653e+07 155 1.43881e+07 8.99815e+06 0.0039773 1.44508e+07 50.1088 0.00563126 0.993144 0 50.1227 GTEX-14PJ6-0326-SM-6871H 1 B1 2 pieces, adherent rim of fat up to ~1mm, delineated, patchy Hashimoto thyroiditis, mild 6.8 Thyroid Thyroid 0002046 92 538 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990773 302116 0.969914 0.991535 0.803235 23540 1 76 0.0022126 165 0 7.83729e+07 0.0292374 501815 7.9042e+07 4.04086e+06 23567 3.90144e+07 0 0.166679 0.991535 0.796436 7.83729e+07 0.00284368 1.73149e+07 1.41109e+07 1.73922e+07 196 1.73241e+07 1.31551e+07 0.0025279 1.74435e+07 50.1718 0.00634871 0.992297 0 50.1114 GTEX-14PJ6-0526-SM-6LLIU 1 B1 6 pieces, atherosi up to ~0.5mm 6.9 Blood Vessel Artery - Aorta 0001496 95 535 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.973331 252597 0.973555 0.98297 0.863111 21390 1 76 0.00233781 176 0 8.26992e+07 0.0260153 238390 8.41319e+07 7.41361e+06 21403 4.0811e+07 0 0.110443 0.98297 0.848413 8.26992e+07 0.00397998 1.73371e+07 1.03197e+07 1.73982e+07 195 1.75903e+07 1.81326e+07 0.00315084 1.7889e+07 50.4209 0.00283353 0.99261 0 50.088 GTEX-14PJ6-0626-SM-686Z6 1 B1 2 pieces, ~50% adherent/interstitial fat, rep delineated 8.7 Heart Heart - Atrial Appendage 0006631 97 533 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992644 159629 0.977977 0.993293 0.840477 22053 1 76 0.0017987 267 0 8.054e+07 0.0217004 1.37645e+06 8.10839e+07 4.45834e+06 22070 4.01499e+07 0 0.1375 0.993293 0.83484 8.054e+07 0.00232337 1.74343e+07 1.1895e+07 1.75773e+07 257 1.73976e+07 1.31384e+07 0.00206087 1.76642e+07 50.3802 0.0169757 0.993942 0 50.2042 GTEX-14PJ6-0726-SM-69LOL 1 B1 2 pieces, mild interstitial fibrosis/ chronic ischemic changes 8.3 Heart Heart - Left Ventricle 0006566 98 532 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993062 203054 0.983943 0.994147 0.842598 20450 1 76 0.00153202 270 0 9.1104e+07 0.0158197 1.75511e+06 9.16403e+07 5.36394e+06 20463 4.54342e+07 0 0.141346 0.994147 0.837666 9.1104e+07 0.00216975 1.98397e+07 2.58327e+07 1.96896e+07 295 1.94782e+07 1.44653e+07 0.00185054 2.01578e+07 50.8573 0.0191522 0.995232 0 49.8101 GTEX-14PJ6-0826-SM-686Z9 1 B1 6 pieces, mucosa up to ~1.3 mm, ~30-40% thickness, focal microcystic metaplastic changes 7.3 Stomach Stomach 0000945 103 527 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991657 190817 0.981574 0.99237 0.838611 22231 1 76 0.00178533 410 0 1.03521e+08 0.018124 1.51128e+06 1.04317e+08 5.34636e+06 22242 5.16127e+07 0 0.142963 0.99237 0.832213 1.03521e+08 0.0022909 2.31666e+07 6.39828e+07 2.33588e+07 369 2.31259e+07 1.69923e+07 0.00203793 2.34859e+07 50.3861 0.0144874 0.993084 0 50.2066 GTEX-14PJ6-0926-SM-686ZA 1 B1 2 pieces, ~40% interstitial/adherent fat; Islets rare but well -preserved; rep encircled 7.7 Pancreas Pancreas 0001150 106 524 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992854 237343 0.982454 0.993576 0.876956 21325 1 76 0.00206605 127 0 1.0035e+08 0.0171426 224332 1.00999e+08 5.28304e+06 21341 5.00285e+07 0 0.105498 0.993576 0.871322 1.0035e+08 0.00259036 2.32626e+07 3.13349e+07 2.35255e+07 161 2.33738e+07 3.2532e+07 0.00232802 2.34945e+07 50.1288 0.00222113 0.994298 0 50.281 GTEX-14PJ6-1026-SM-686ZB 1 B1 6 pieces, aquamous mucosa up to ~0.3 mm, 30% thickness 9.2 Esophagus Esophagus - Mucosa 0006920 110 520 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991301 221266 0.974538 0.991943 0.864835 23128 1 76 0.00237155 274 0 9.55099e+07 0.0251802 416125 9.62857e+07 5.38624e+06 23148 4.75989e+07 0 0.109703 0.991943 0.857866 9.55099e+07 0.002876 2.12668e+07 1.33793e+07 2.15462e+07 313 2.14173e+07 1.74768e+07 0.00262361 2.14536e+07 50.0423 0.00432177 0.992584 0 50.3263 GTEX-14PJ6-1126-SM-6AJ9R 1 B1 6 pieces, target muscularis, good specimens 8 Esophagus Esophagus - Muscularis 0004648 112 518 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99247 116933 0.977025 0.994591 0.832957 21396 1 76 0.00182105 169 0 6.94424e+07 0.022721 462946 6.98201e+07 5.00535e+06 21408 3.45863e+07 0 0.144068 0.994591 0.828451 6.94424e+07 0.00271903 1.48202e+07 7.00848e+06 1.49973e+07 176 1.4899e+07 1.19621e+07 0.00226908 1.50515e+07 50.2546 0.00663056 0.996712 0 50.2969 GTEX-14PJ6-1226-SM-6LLHJ 1 B1 2 pieces, subtotally occlusive atherosis, delineated, focally calcified 7.6 Blood Vessel Artery - Coronary 0001621 116 514 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977944 179891 0.974673 0.986585 0.848205 21944 1 76 0.00228373 212 0 8.8986e+07 0.0249012 340937 9.0196e+07 7.46187e+06 21961 4.39825e+07 0 0.126468 0.986585 0.836826 8.8986e+07 0.00375302 1.89395e+07 7.08518e+06 1.89167e+07 239 1.91252e+07 1.76586e+07 0.00301194 1.94454e+07 50.415 0.00377996 0.995226 0 49.9698 GTEX-14PJ6-1526-SM-6AJ9M 1 B1 2 pieces, all myometrium 8.4 Uterus Uterus 0000995 117 513 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991494 227238 0.971469 0.993828 0.778125 22764 1 76 0.00193425 161 0 7.27988e+07 0.028242 166491 7.32509e+07 5.06239e+06 22792 3.62396e+07 0 0.193344 0.993828 0.773322 7.27988e+07 0.00287646 1.58644e+07 6.79645e+06 1.59943e+07 166 1.59753e+07 1.24636e+07 0.00240425 1.60442e+07 50.1075 0.00227289 0.996161 0 50.2039 GTEX-14PJ6-1626-SM-6872D 2 B1 6 pieces, squamous epithelium beginning to slough, patchy chronic vaginitis 8.1 Vagina Vagina 0000996 118 512 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.99092 242249 0.976016 0.99163 0.800801 24107 1 76 0.00222405 277 0 9.62881e+07 0.0231892 266047 9.71009e+07 5.4101e+06 24135 4.79679e+07 0 0.175215 0.99163 0.794098 9.62881e+07 0.00275278 2.16691e+07 1.44455e+07 2.17994e+07 265 2.17555e+07 1.83747e+07 0.00248823 2.17793e+07 50.0273 0.0027399 0.992339 0 50.1498 GTEX-14PJ6-1726-SM-6AJBN 1 B1 4 pieces, well p'reserved mucoa; lymphoid aggregates are ~20% specimen 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 122 508 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.98962 179383 0.972425 0.992234 0.807738 22457 1 76 0.00228116 165 0 6.90161e+07 0.0268915 519347 6.95563e+07 5.03895e+06 22479 3.43347e+07 0 0.164687 0.992234 0.801465 6.90161e+07 0.0035228 1.52889e+07 1.01127e+07 1.54424e+07 166 1.54265e+07 1.14069e+07 0.00290035 1.54719e+07 50.0735 0.00746657 0.994849 0 50.2498 GTEX-14PJ6-2126-SM-6EU1V 0 B1 6 pieces, squamous epithelium is ~30 microns; adherent dermal fat focallky present up to ~1.5mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 134 496 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991807 246636 0.969462 0.993218 0.761423 23922 1 76 0.00408159 192 0 8.88161e+07 0.0303303 271337 8.94226e+07 8.53359e+06 23962 4.42259e+07 0 0.208039 0.993218 0.756259 8.88161e+07 0.004122 1.93683e+07 9.53025e+06 1.94421e+07 198 1.93827e+07 1.3556e+07 0.00410177 1.95507e+07 50.2158 0.00303432 0.994629 0 50.0951 GTEX-14PJ6-2226-SM-6LLIV 1 B1 2 pieces, minimal fascia/vascular elements 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 136 494 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977721 185574 0.974594 0.98648 0.792982 23296 1 76 0.00237237 164 0 7.85071e+07 0.0251204 622503 7.95831e+07 6.7394e+06 23320 3.88085e+07 0 0.181612 0.98648 0.782261 7.85071e+07 0.00381073 1.72156e+07 8.3093e+06 1.71472e+07 193 1.73852e+07 1.21299e+07 0.00308516 1.76345e+07 50.356 0.00782205 0.995239 0 49.9004 GTEX-14PJ6-2326-SM-6ETZR 1 B1 2 pieces, ~10% interstitial fat, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 138 492 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.993442 136437 0.982857 0.99469 0.880089 19647 1 76 0.00380621 209 0 8.04703e+07 0.0169217 860762 8.08999e+07 8.14785e+06 19653 4.01061e+07 0 0.102768 0.99469 0.875416 8.04703e+07 0.00381899 1.76525e+07 8.33575e+06 1.77623e+07 209 1.76362e+07 1.57089e+07 0.00381259 1.78786e+07 50.3412 0.0106398 0.995939 0 50.1551 GTEX-14PJ6-2426-SM-6ETZS 0 B1 2 pieces, good celan sections, no adherent fat 7 Nerve Nerve - Tibial 0001323 140 490 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989583 199808 0.971671 0.991032 0.79371 23123 1 76 0.00406183 157 0 7.118e+07 0.0280415 309308 7.18241e+07 6.91447e+06 23154 3.54232e+07 0 0.177961 0.991032 0.786592 7.118e+07 0.0042309 1.57117e+07 5.95374e+06 1.57631e+07 158 1.5688e+07 1.1592e+07 0.00414624 1.5889e+07 50.3183 0.00430647 0.992481 0 50.0817 GTEX-14PJ6-2626-SM-6EU2T 0 B1 5 pieces, minimal dermal fat, squamous epithelium is ~30-35 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 137 493 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991295 164710 0.971486 0.992703 0.789695 22334 1 76 0.00409032 156 0 6.49706e+07 0.0283052 246650 6.54482e+07 6.24405e+06 22356 3.23586e+07 0 0.18179 0.992703 0.783933 6.49706e+07 0.00416202 1.42872e+07 6.60796e+06 1.42967e+07 141 1.42587e+07 1.10875e+07 0.00412612 1.44159e+07 50.274 0.00376863 0.994112 0 50.0166 GTEX-14PJ6-5004-SM-AN42W B1 Heart Heart - Left Ventricle 0006566 99 ChIP-Seq GTEX-14PJ6-5019-SM-AN42V B1 Muscle Muscle - Skeletal 0011907 138 ChIP-Seq GTEX-14PJM-0003-SM-5GYE8 C1 Blood Whole Blood 0013756 418 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJM-0003-SM-7DLG8 C1 Blood Whole Blood 0013756 418 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJM-0006-SM-9JGHA C1 8.8 Blood Whole Blood 0013756 418 BP-47788 RNA isolation_PAXgene Blood RNA (Manual) 12/30/2013 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.985492 545079 0.977123 0.986609 0.754569 21671 1 76 0.00230166 272 0 1.48798e+08 0.0221653 343097 1.50818e+08 7.57688e+06 21704 7.41418e+07 0 0.222554 0.986609 0.744465 1.48798e+08 0.00311036 3.37892e+07 9.01926e+07 3.39988e+07 324 3.40611e+07 3.04847e+07 0.00270556 3.38998e+07 49.8813 0.00227491 0.987727 0 50.1546 GTEX-14PJM-0011-R10a-SM-686ZP C1, A1 6 Brain Brain - Frontal Cortex (BA9) 0009834 427 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991344 602459 0.958177 0.992009 0.841732 23918 1 76 0.00207076 373 0 1.00618e+08 0.0415241 4.32029e+06 1.01429e+08 5.28378e+06 23936 5.01243e+07 0 0.116445 0.992009 0.835006 1.00618e+08 0.00262068 2.19235e+07 2.0163e+07 2.21423e+07 360 2.19791e+07 1.15213e+07 0.00234554 2.21358e+07 50.1776 0.0425942 0.992673 0 50.2482 GTEX-14PJM-0011-R10a-SM-AHZNK C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 427 ChIP-Seq GTEX-14PJM-0011-R10a-SM-CYKSM C1, A1 6 Brain Brain - Frontal Cortex (BA9) 0009834 427 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 RIP-Seq GTEX-14PJM-0011-R1a-SM-6AJAG C1, A1 6.5 Brain Brain - Hippocampus 0001954 427 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.991663 562346 0.950435 0.993903 0.80353 22628 1 76 0.00211613 200 0 6.79852e+07 0.0493875 5.86036e+06 6.84023e+07 4.98539e+06 22645 3.38534e+07 0 0.146905 0.993903 0.798631 6.79852e+07 0.00300219 1.45702e+07 2.88849e+07 1.48035e+07 228 1.46646e+07 5.36387e+06 0.00255816 1.4848e+07 50.3107 0.085675 0.996142 0 50.3972 GTEX-14PJM-0011-R1a-SM-6EU2Z C1, A1 7.9 Brain Brain - Hippocampus 0001954 427 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.990424 558666 0.954839 0.991978 0.799746 23793 1 76 0.00419364 155 0 7.17803e+07 0.0448136 4.09963e+06 7.23607e+07 7.33793e+06 23821 3.57386e+07 0 0.155093 0.991978 0.79333 7.17803e+07 0.00416277 1.56891e+07 2.02288e+07 1.5835e+07 191 1.57558e+07 7.6275e+06 0.00417823 1.58769e+07 50.1914 0.0566554 0.993532 0 50.2314 GTEX-14PJM-0011-R1a-SM-CNPO3 C1, A1 6.5 Brain Brain - Hippocampus 0001954 427 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983863 815574 0.955159 0.987178 0.813626 24817 1 76 0.00550083 371 0 1.04552e+08 0.044612 1.04276e+07 1.0591e+08 2.4547e+07 24843 5.19668e+07 0 0.141533 0.987178 0.803194 1.04552e+08 0.00871993 2.24127e+07 3.84211e+07 2.31158e+07 360 2.29829e+07 8.26287e+06 0.00710497 2.28277e+07 49.8307 0.0984571 0.990493 0 50.7722 GTEX-14PJM-0011-R3b-SM-5ZZV9 C1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 427 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994243 581199 0.953333 0.99545 0.815009 25359 1 76 0.00206836 211 0 7.40129e+07 0.0462656 2.63582e+06 7.43511e+07 7.18177e+06 25385 3.68947e+07 0 0.138324 0.99545 0.811301 7.40129e+07 0.00309002 1.6127e+07 1.75817e+07 1.63107e+07 234 1.62115e+07 9.76714e+06 0.00257857 1.63133e+07 50.1565 0.0354509 0.996658 0 50.2832 GTEX-14PJM-0011-R4a-SM-5YYAS C1, A1 6.8 Brain Brain - Amygdala 0001876 427 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990277 705431 0.959973 0.991827 0.831941 23942 1 76 0.00260083 376 0 1.09426e+08 0.0397451 8.21672e+06 1.10328e+08 5.16829e+06 23970 5.44806e+07 0 0.128031 0.991827 0.825142 1.09426e+08 0.00323212 2.36644e+07 3.20801e+07 2.42772e+07 359 2.40142e+07 1.12065e+07 0.00291598 2.40734e+07 50.0615 0.0744755 0.993378 0 50.6391 GTEX-14PJM-0011-R6a-SM-6872G C1, A1 8.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 427 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992982 1.09894e+06 0.948781 0.993699 0.808657 25074 1 76 0.00196574 373 0 1.11572e+08 0.0507974 4.03333e+06 1.1228e+08 5.89714e+06 25108 5.56029e+07 0 0.140124 0.993699 0.803561 1.11572e+08 0.0024463 2.41231e+07 3.01724e+07 2.41124e+07 333 2.40056e+07 1.43488e+07 0.00220585 2.43131e+07 50.3182 0.0359221 0.994416 0 49.9889 GTEX-14PJM-0011-R7a-SM-6AJBX C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 427 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99149 779103 0.946672 0.99388 0.812106 22452 1 76 0.00204771 198 0 7.26069e+07 0.053126 4.06659e+06 7.30539e+07 5.09711e+06 22468 3.61465e+07 0 0.134565 0.99388 0.807137 7.26069e+07 0.00311054 1.5489e+07 3.29305e+07 1.56919e+07 239 1.55362e+07 6.63224e+06 0.00257785 1.58234e+07 50.4578 0.0556655 0.99627 0 50.3253 GTEX-14PJM-0011-R8b-SM-69LPD C1, A1 6.7 Brain Brain - Hypothalamus 0001898 427 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992308 631766 0.947407 0.99376 0.805404 24115 1 76 0.00195787 268 0 7.69145e+07 0.0523349 3.86447e+06 7.73975e+07 4.73566e+06 24140 3.831e+07 0 0.142003 0.99376 0.800378 7.69145e+07 0.00283097 1.66768e+07 2.12309e+07 1.68011e+07 258 1.66769e+07 7.70302e+06 0.00239378 1.69135e+07 50.3523 0.0499302 0.995212 0 50.1856 GTEX-14PJM-0011-R9b-SM-6EU35 C1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 427 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989894 712507 0.951718 0.99152 0.794322 23188 1 76 0.00423566 182 0 7.41876e+07 0.0478476 1.31053e+06 7.48221e+07 7.54392e+06 23210 3.69345e+07 0 0.157396 0.99152 0.787586 7.41876e+07 0.00420861 1.6334e+07 1.68313e+07 1.64723e+07 175 1.63661e+07 1.09347e+07 0.00422216 1.6557e+07 50.2899 0.0175152 0.993145 0 50.2107 GTEX-14PJM-0226-SM-62LF1 1 C1 6 pieces; well trimmed; 5-10% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 523 864 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.989298 154274 0.975528 0.992839 0.82966 22337 1 76 0.00273031 191 0 6.50286e+07 0.0240966 216691 6.54976e+07 4.49664e+06 22355 3.23269e+07 0 0.145868 0.992839 0.823719 6.50286e+07 0.00344179 1.40317e+07 6.69688e+06 1.41286e+07 151 1.41666e+07 1.25166e+07 0.00308478 1.42019e+07 50.0623 0.00330838 0.99638 0 50.1722 GTEX-14PJM-0326-SM-62LF2 1 C1 2 pieces; 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 525 862 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988263 223217 0.974735 0.991532 0.80691 23197 1 76 0.00275117 174 0 8.39102e+07 0.0249208 460879 8.46269e+07 5.86592e+06 23223 4.17191e+07 0 0.167826 0.991532 0.800077 8.39102e+07 0.00335585 1.84708e+07 7.34055e+06 1.86055e+07 201 1.86306e+07 1.48624e+07 0.00305251 1.86977e+07 50.0899 0.00544601 0.9948 0 50.1817 GTEX-14PJM-0426-SM-5ZZVN 1 C1 2 pieces; minimal internal fat; no atrophy 8 Muscle Muscle - Skeletal 0011907 529 859 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.995133 186340 0.986052 0.996151 0.881392 19421 1 76 0.00174125 198 0 8.40793e+07 0.0137334 872507 8.44041e+07 7.45145e+06 19430 4.19378e+07 0 0.10466 0.996151 0.878 8.40793e+07 0.00269853 1.82462e+07 1.06152e+07 1.82742e+07 252 1.818e+07 1.76111e+07 0.0022194 1.84118e+07 50.3168 0.0103373 0.997169 0 50.0385 GTEX-14PJM-0626-SM-686ZN 1 C1 2 pieces; well trimmed; no lesions 8.1 Blood Vessel Artery - Tibial 0007610 538 850 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989248 213521 0.972285 0.989914 0.8185 21355 1 76 0.00208352 165 0 7.63163e+07 0.0273228 403420 7.70939e+07 4.20365e+06 21375 3.79944e+07 0 0.153786 0.989914 0.810245 7.63163e+07 0.0026826 1.62473e+07 7.65773e+06 1.63838e+07 181 1.62801e+07 1.43555e+07 0.00238286 1.6405e+07 50.1912 0.00523284 0.990581 0 50.2091 GTEX-14PJM-0826-SM-6LLIW 1 C1 2 pieces; larger piece with 10% internal fat; no obvious inflammatory lesion 6.2 Heart Heart - Atrial Appendage 0006631 562 827 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.972654 165707 0.982443 0.9832 0.868572 20744 1 76 0.00229507 149 0 7.30262e+07 0.017205 1.87464e+06 7.4274e+07 7.09018e+06 20755 3.60235e+07 0 0.113871 0.9832 0.853979 7.30262e+07 0.0041067 1.5219e+07 9.31858e+06 1.51602e+07 163 1.54331e+07 1.70319e+07 0.00319117 1.56104e+07 50.2857 0.0252395 0.993745 0 49.9033 GTEX-14PJM-0926-SM-6AJ9Y 1 C1 2 pieces; moderate emphysema; mild patchy alveolar hemorrhage 8.6 Lung Lung 0008952 564 826 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990389 251077 0.973986 0.992895 0.791831 22650 1 76 0.00224137 169 0 7.88124e+07 0.0254542 268368 7.93764e+07 5.6296e+06 22681 3.92087e+07 0 0.182155 0.992895 0.786206 7.88124e+07 0.00337527 1.74138e+07 9.24488e+06 1.76056e+07 190 1.76041e+07 1.34183e+07 0.00280689 1.76049e+07 50.0012 0.00338095 0.995401 0 50.2738 GTEX-14PJM-0926-SM-CYKSY 1 C1 2 pieces; moderate emphysema; mild patchy alveolar hemorrhage 8.6 Lung Lung 0008952 564 826 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 RIP-Seq GTEX-14PJM-1026-SM-6ETZT 1 C1 2 pieces; well trimmed; focal plaques 6.5 Blood Vessel Artery - Coronary 0001621 567 823 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990003 255915 0.961789 0.991237 0.751236 22441 1 76 0.00432424 133 0 7.01198e+07 0.0378701 275232 7.07397e+07 6.96106e+06 22467 3.48614e+07 0 0.210553 0.991237 0.744652 7.01198e+07 0.00451876 1.49703e+07 1.34684e+07 1.5026e+07 145 1.49399e+07 1.14692e+07 0.00442138 1.51435e+07 50.3385 0.00389077 0.992471 0 50.0928 GTEX-14PJM-1126-SM-6LLHK 1 C1 2 pieces; extensive interstitial myocarditis (10 & 30% of the surface area [annotated]) not typical of infarction, possibly viral or autoimmune myocarditis 6.8 Heart Heart - Left Ventricle 0006566 569 822 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977819 264840 0.968884 0.986352 0.766246 25839 1 76 0.0025806 269 0 1.09121e+08 0.0308784 1.27136e+06 1.10631e+08 9.88343e+06 25882 5.39537e+07 0 0.202639 0.986352 0.755788 1.09121e+08 0.00397895 2.37816e+07 1.11399e+07 2.39113e+07 310 2.42895e+07 1.59276e+07 0.00327372 2.43026e+07 50.0135 0.0114919 0.994886 0 50.136 GTEX-14PJM-1126-SM-CYKSX 1 C1 2 pieces; extensive interstitial myocarditis (10 & 30% of the surface area [annotated]) not typical of infarction, possibly viral or autoimmune myocarditis 6.8 Heart Heart - Left Ventricle 0006566 569 822 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 RIP-Seq GTEX-14PJM-1226-SM-686Z7 1 C1 2 pieces; 5% fibrovascular content 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 570 821 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986875 181773 0.971601 0.987329 0.790376 23549 1 76 0.0022872 142 0 6.81973e+07 0.0280662 261609 6.90725e+07 3.67066e+06 23574 3.39393e+07 0 0.181225 0.987329 0.780361 6.81973e+07 0.00280419 1.5036e+07 8.78181e+06 1.50401e+07 162 1.49797e+07 1.1493e+07 0.00254558 1.51335e+07 50.2554 0.00378745 0.987783 0 50.007 GTEX-14PJM-1326-SM-664NX 1 C1 2 pieces; moderate lymphocytic (Hashimoto) thyroiditis 7.1 Thyroid Thyroid 0002046 572 819 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.988128 266605 0.963887 0.989001 0.723609 24960 1 76 0.00326044 142 0 7.63408e+07 0.0333372 190845 7.71899e+07 4.82382e+06 25006 3.78485e+07 0 0.240278 0.989001 0.715649 7.63408e+07 0.00425163 1.68391e+07 1.32674e+07 1.68855e+07 157 1.68985e+07 1.11035e+07 0.0037556 1.68969e+07 49.9977 0.00247241 0.989873 0 50.0689 GTEX-14PJM-1426-SM-62LF3 1 C1 6 pieces; well trimmed; no plaques 6.2 Blood Vessel Artery - Aorta 0001496 573 819 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986785 209276 0.972247 0.990403 0.785393 20861 1 76 0.00287519 130 0 6.0173e+07 0.0273012 178000 6.07561e+07 4.12529e+06 20884 2.98787e+07 0 0.186855 0.990403 0.777855 6.0173e+07 0.00365997 1.29419e+07 6.52051e+06 1.30167e+07 132 1.30359e+07 1.0899e+07 0.00326615 1.31253e+07 50.1709 0.00292975 0.994021 0 50.1442 GTEX-14PJM-1526-SM-664NY 1 C1 6 pieces; well dissected 7.4 Esophagus Esophagus - Mucosa 0006920 575 817 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992002 232493 0.976933 0.992577 0.775595 23219 1 76 0.00247102 208 0 9.4912e+07 0.022761 596979 9.56218e+07 5.93939e+06 23251 4.72574e+07 0 0.201338 0.992577 0.769837 9.4912e+07 0.00326886 2.13655e+07 1.23363e+07 2.14334e+07 248 2.13989e+07 1.66334e+07 0.00286971 2.14594e+07 50.0705 0.00624313 0.993152 0 50.0793 GTEX-14PJM-1626-SM-6LLHL 1 C1 6 pieces; well dissected 8 Esophagus Esophagus - Muscularis 0004648 577 816 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978636 224208 0.975666 0.986744 0.79062 23698 1 76 0.002514 277 0 1.01799e+08 0.0240189 612127 1.03166e+08 8.36222e+06 23731 5.03539e+07 0 0.185045 0.986744 0.78014 1.01799e+08 0.00386989 2.17871e+07 8.66783e+06 2.17775e+07 277 2.20566e+07 1.79607e+07 0.00318638 2.22794e+07 50.2513 0.0059334 0.994853 0 49.989 GTEX-14PJM-1726-SM-6LLHB 1 C1 6 pieces; well dissected 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 578 815 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975166 208585 0.972048 0.984787 0.743059 24021 1 76 0.00257482 202 0 9.22306e+07 0.0276667 583699 9.36554e+07 8.1799e+06 24060 4.55147e+07 0 0.228989 0.984787 0.731755 9.22306e+07 0.00409927 1.9844e+07 7.74203e+06 1.97936e+07 203 2.00924e+07 1.42769e+07 0.0033296 2.03871e+07 50.364 0.00623241 0.994408 0 49.9364 GTEX-14PJM-2126-SM-6AJAS 2 C1 2 pieces; well trimmed 6.3 Pancreas Pancreas 0001150 585 822 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991246 245654 0.980469 0.993455 0.863224 19015 1 76 0.00196938 83 0 7.28503e+07 0.0190226 170640 7.33303e+07 5.50342e+06 19025 3.62752e+07 0 0.117245 0.993455 0.857574 7.28503e+07 0.00289861 1.69001e+07 3.12858e+07 1.72146e+07 98 1.71495e+07 2.50912e+07 0.00243296 1.71287e+07 49.9696 0.00232701 0.995664 0 50.461 GTEX-14PJM-2226-SM-6AJAT 2 C1 2 pieces; 10% external fat 6.1 Adrenal Gland Adrenal Gland 0002369 588 820 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989312 492882 0.966003 0.991876 0.772728 21246 1 76 0.00216139 196 0 7.56573e+07 0.0337201 2.57479e+06 7.62769e+07 5.12417e+06 21268 3.76593e+07 0 0.193275 0.991876 0.76645 7.56573e+07 0.00316881 1.60742e+07 2.00236e+07 1.62628e+07 203 1.62805e+07 8.99563e+06 0.0026638 1.62375e+07 49.9338 0.0337558 0.99444 0 50.2916 GTEX-14PJM-2426-SM-686ZC 1 C1 2 pieces; atrophic 7.9 Ovary Ovary 0000992 592 817 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991435 254807 0.964946 0.992065 0.716374 24682 1 76 0.00212401 283 0 1.06386e+08 0.0347654 91799 1.07237e+08 5.29745e+06 24744 5.29995e+07 0 0.248572 0.992065 0.710689 1.06386e+08 0.00258782 2.32824e+07 1.2014e+07 2.33761e+07 265 2.33137e+07 1.91557e+07 0.00235577 2.34147e+07 50.1081 0.000856037 0.992694 0 50.1004 GTEX-14PJM-2626-SM-686ZD 3 C1 6 pieces; autolyzed mucosa, muscle intact 7.1 Colon Colon - Transverse 0001157 596 871 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988777 228322 0.970097 0.989412 0.790701 25293 1 76 0.00254835 276 0 9.72337e+07 0.0279674 620119 9.82742e+07 4.97973e+06 25322 4.83486e+07 0 0.179396 0.989412 0.782329 9.72337e+07 0.00306792 2.12084e+07 1.16583e+07 2.1359e+07 286 2.12911e+07 1.58186e+07 0.00280797 2.13395e+07 50.0568 0.00631009 0.990047 0 50.1769 GTEX-14PJM-2826-SM-69LPV 2 C1 2 pieces; atrophic endometrium and myometrium 6.8 Uterus Uterus 0000995 599 869 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99166 126980 0.971214 0.992926 0.790586 21985 1 76 0.00196891 138 0 5.75415e+07 0.0284529 108883 5.79515e+07 3.39192e+06 22009 2.86482e+07 0 0.180628 0.992926 0.784994 5.75415e+07 0.00278054 1.25263e+07 7.58934e+06 1.26034e+07 134 1.25527e+07 1.12982e+07 0.00237421 1.26544e+07 50.2017 0.00187886 0.994192 0 50.1534 GTEX-14PJM-2926-SM-69LOE 1 C1 6 pieces; thin atrophic epithelium 6.8 Vagina Vagina 0000996 600 868 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992231 184113 0.969948 0.993483 0.685126 25024 1 76 0.00217154 159 0 8.02208e+07 0.0296415 178842 8.0747e+07 4.91969e+06 25072 3.99261e+07 0 0.284822 0.993483 0.680661 8.02208e+07 0.00297964 1.77172e+07 7.30833e+06 1.77452e+07 167 1.77268e+07 1.13943e+07 0.00257508 1.78359e+07 50.1534 0.00221484 0.994736 0 50.0395 GTEX-14PJM-3026-SM-6LLHM 2 C1 4 pieces 7.4 Brain Brain - Cerebellum 0002037 619 850 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978603 937253 0.927478 0.986126 0.67912 25977 1 76 0.0027506 270 0 1.1422e+08 0.0721282 1.35825e+06 1.15827e+08 9.63345e+06 26032 5.64963e+07 0 0.248358 0.986126 0.669698 1.1422e+08 0.00404996 2.40413e+07 4.09228e+07 2.41646e+07 286 2.45107e+07 1.32609e+07 0.00339532 2.45039e+07 49.993 0.0117266 0.993648 0 50.1279 GTEX-14PJM-3126-SM-6EU2R 2 C1 6 fragmented pieces 5.8 Brain Brain - Cortex 0001870 621 848 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992619 282102 0.966269 0.994009 0.841751 23072 1 76 0.00418941 196 0 7.33608e+07 0.0333304 2.59513e+06 7.38029e+07 7.41266e+06 23087 3.65459e+07 0 0.124517 0.994009 0.836708 7.33608e+07 0.00409801 1.60714e+07 1.51627e+07 1.62665e+07 224 1.61581e+07 8.95742e+06 0.00414377 1.62786e+07 50.1856 0.035163 0.995399 0 50.3017 GTEX-14PJM-3226-SM-6AJA1 1 C1 1 piece; mostly anterior [annotated] 7.8 Pituitary Pituitary 0000007 622 848 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991766 314857 0.958281 0.993802 0.733059 24877 1 76 0.00211097 162 0 8.15207e+07 0.0414372 264201 8.20291e+07 5.3908e+06 24922 4.05902e+07 0 0.225221 0.993802 0.728516 8.15207e+07 0.00286848 1.68921e+07 1.51145e+07 1.705e+07 181 1.70799e+07 1.29970e+07 0.00248894 1.7013e+07 49.902 0.00322082 0.995838 0 50.2327 GTEX-14PJN-0002-SM-5GYEC B1 Blood Whole Blood 0013756 -188 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJN-0002-SM-7DRP3 B1 Blood Whole Blood 0013756 -188 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJN-0005-SM-9JGGF B1 7 Blood Whole Blood 0013756 -188 BP-47788 RNA isolation_PAXgene Blood RNA (Manual) 12/30/2013 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.984824 911450 0.955388 0.985909 0.801292 19053 1 76 0.00221877 163 0 9.87959e+07 0.0440542 382190 1.00208e+08 5.08145e+06 19065 4.92293e+07 0 0.154096 0.985909 0.790001 9.87959e+07 0.00330953 2.18824e+07 8.60893e+07 2.20095e+07 188 2.20243e+07 2.19908e+07 0.00276355 2.19952e+07 49.9669 0.00381397 0.986994 0 50.1449 GTEX-14PJN-0526-SM-68724 1 B1 6 pieces Squamous mucosa up to ~0.3-0.4mm 7.8 Esophagus Esophagus - Mucosa 0006920 409 1164 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992501 322773 0.978637 0.993168 0.838306 22162 1 76 0.00207581 210 0 9.21944e+07 0.0209789 243366 9.28286e+07 4.97487e+06 22185 4.59507e+07 0 0.140332 0.993168 0.832578 9.21944e+07 0.00262003 2.08715e+07 1.29757e+07 2.09972e+07 244 2.0934e+07 1.94267e+07 0.00234774 2.09934e+07 50.0708 0.00262167 0.993835 0 50.1501 GTEX-14PJN-0626-SM-6EU13 1 B1 2 pieces, no significant fascial/vascular elements 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 413 1160 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991589 181127 0.97639 0.992997 0.821239 22465 1 76 0.00421126 169 0 7.79342e+07 0.0233752 479543 7.84838e+07 7.33455e+06 22492 3.882e+07 0 0.155151 0.992997 0.815488 7.79342e+07 0.00426961 1.71237e+07 7.93613e+06 1.72944e+07 183 1.72194e+07 1.22938e+07 0.00424039 1.7305e+07 50.1239 0.00611009 0.994404 0 50.248 GTEX-14PJN-0826-SM-686ZL 1 B1 5 pieces, correct target mucosa but not sufficient target lymphoid aggregates 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 415 1158 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991158 228214 0.969324 0.991841 0.784951 25032 1 76 0.00249827 281 0 9.85787e+07 0.0299839 367460 9.93896e+07 5.63255e+06 25076 4.91068e+07 0 0.184372 0.991841 0.778547 9.85787e+07 0.00303052 2.1807e+07 1.20563e+07 2.19313e+07 282 2.18464e+07 1.60135e+07 0.00276421 2.19588e+07 50.1283 0.00369717 0.992524 0 50.1421 GTEX-14PJN-0926-SM-6EU19 1 B1 6 pieces, all target muscularis 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 417 1156 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992409 148310 0.975087 0.993823 0.828616 22923 1 76 0.00418003 174 0 7.99727e+07 0.0246353 343904 8.04698e+07 8.05652e+06 22941 3.98387e+07 0 0.146471 0.993823 0.823498 7.99727e+07 0.00422599 1.73376e+07 6.53617e+06 1.74695e+07 177 1.741e+07 1.4643e+07 0.00420298 1.75042e+07 50.1348 0.00427371 0.995238 0 50.1894 GTEX-14PJN-1526-SM-6AJBP 1 B1 2 pieces, Islets well visualized, ~40% adherent fat, delineated. 6.4 Pancreas Pancreas 0001150 426 1147 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991009 253935 0.975738 0.993623 0.852327 20102 1 76 0.00217936 99 0 6.61207e+07 0.0239784 89191 6.65451e+07 4.66811e+06 20112 3.29067e+07 0 0.123411 0.993623 0.846892 6.61207e+07 0.00347971 1.51129e+07 2.4637e+07 1.54408e+07 113 1.53638e+07 1.98547e+07 0.00282782 1.53664e+07 50.0042 0.00134031 0.996237 0 50.5367 GTEX-14PJN-1626-SM-68727 1 B1 2 pieces, spermatogenesis is present 5.7 Testis Testis 0000473 428 1145 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989971 345724 0.930329 0.990572 0.723726 32899 1 76 0.00227736 174 0 8.77348e+07 0.0694119 1.14638e+06 8.85699e+07 4.40356e+06 32969 4.37059e+07 0 0.206603 0.990572 0.716903 8.77348e+07 0.00278444 1.84254e+07 1.3239e+07 1.85079e+07 202 1.84441e+07 1.25543e+07 0.00253074 1.85334e+07 50.1208 0.0129433 0.991173 0 50.1117 GTEX-14PJN-1726-SM-69LO7 1 B1 4 pieces, ~70% glandular tissue (delineated), rest mucosa/ stroma 8.3 Salivary Gland Minor Salivary Gland 0006330 440 1133 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.990171 169480 0.975757 0.991372 0.794992 23573 1 76 0.00215605 211 0 8.12558e+07 0.0227156 128761 8.19629e+07 4.94715e+06 23599 4.04478e+07 0 0.180765 0.991372 0.788133 8.12558e+07 0.00297303 1.87102e+07 2.24771e+07 1.86628e+07 207 1.86716e+07 1.45643e+07 0.00256405 1.87994e+07 50.1706 0.00157097 0.992573 0 49.9366 GTEX-14PJN-1826-SM-6AJ98 0 B1 6 pieces, minimal dermal fat, squamous epitheliums is 30-40 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 440 1133 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990356 163968 0.970404 0.993027 0.785895 22234 1 76 0.00211801 156 0 6.13645e+07 0.0293981 277199 6.17954e+07 4.19462e+06 22259 3.05358e+07 0 0.184508 0.993027 0.780415 6.13645e+07 0.00343456 1.33919e+07 6.78256e+06 1.34915e+07 150 1.34839e+07 1.00451e+07 0.00277451 1.35573e+07 50.1359 0.00448576 0.995698 0 50.1852 GTEX-14PJN-2126-SM-6AJBM 0 B1 2 pieces, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 529 1044 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991074 161640 0.983055 0.993206 0.861245 19463 1 76 0.00207339 206 0 7.6779e+07 0.0167461 1.08137e+06 7.73042e+07 4.85602e+06 19472 3.82482e+07 0 0.121809 0.993206 0.855394 7.6779e+07 0.00291589 1.6644e+07 1.73348e+07 1.68206e+07 224 1.66626e+07 1.28186e+07 0.00249374 1.69576e+07 50.4388 0.0139885 0.995337 0 50.2638 GTEX-14PJN-2226-SM-6872I 0 B1 2 pieces, clean specimens 7.8 Blood Vessel Artery - Tibial 0007610 531 1042 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989193 283949 0.972526 0.989821 0.837822 21808 1 76 0.0020494 217 0 9.49916e+07 0.0270696 342112 9.59684e+07 4.82041e+06 21830 4.73074e+07 0 0.134704 0.989821 0.829294 9.49916e+07 0.00264334 2.02301e+07 9.04836e+06 2.04641e+07 254 2.03238e+07 1.92156e+07 0.00234618 2.0432e+07 50.1327 0.00356484 0.990449 0 50.2875 GTEX-14PJN-5016-SM-AN42P B1 Muscle Muscle - Skeletal 0011907 529 ChIP-Seq GTEX-14PJO-0003-SM-5GYDZ C1 Blood Whole Blood 0013756 501 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJO-0003-SM-7DRON C1 Blood Whole Blood 0013756 501 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJO-0005-SM-9JGGY C1 8.6 Blood Whole Blood 0013756 501 BP-47788 RNA isolation_PAXgene Blood RNA (Manual) 12/30/2013 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.964727 374271 0.986502 0.96558 0.819555 17615 1 76 0.0020884 189 0 1.23558e+08 0.0125095 268179 1.27962e+08 6.44707e+06 17619 6.15443e+07 0 0.166947 0.96558 0.791346 1.23558e+08 0.00290723 2.96897e+07 2.1e+08 2.95899e+07 253 2.96582e+07 3.52591e+07 0.00249745 2.97402e+07 50.069 0.00209576 0.966432 0 49.9158 GTEX-14PJO-0011-R10a-SM-686ZS C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 520 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986085 545291 0.959403 0.986861 0.848382 22353 1 76 0.00273313 368 0 7.97971e+07 0.0404414 5.16259e+06 8.08595e+07 4.49259e+06 22368 3.97194e+07 0 0.111022 0.986861 0.837235 7.97971e+07 0.00331981 1.73671e+07 2.51722e+07 1.74915e+07 336 1.72093e+07 5.7816e+06 0.00302624 1.77102e+07 50.7173 0.0638465 0.987637 0 50.1785 GTEX-14PJO-0011-R10a-SM-AHZNH C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 520 ChIP-Seq GTEX-14PJO-0011-R10a-SM-CYKSN C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 520 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 RIP-Seq GTEX-14PJO-0011-R1b-SM-6AJAK C1, A1 7.4 Brain Brain - Hippocampus 0001954 520 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991189 980328 0.953775 0.993546 0.803955 23589 1 76 0.00230143 371 0 1.02299e+08 0.0460236 8.70473e+06 1.02964e+08 7.28904e+06 23607 5.09314e+07 0 0.149821 0.993546 0.798767 1.02299e+08 0.00338128 2.18422e+07 5.01142e+07 2.23991e+07 391 2.20129e+07 8.10718e+06 0.00284007 2.24577e+07 50.5002 0.0845416 0.995904 0 50.6294 GTEX-14PJO-0011-R2a-SM-5ZZVF C1, A1 6.7 Brain Brain - Substantia nigra 0002038 520 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993275 319825 0.967098 0.994484 0.83315 22755 1 76 0.00228787 202 0 6.81306e+07 0.0326991 6.29646e+06 6.85084e+07 6.45752e+06 22767 3.39699e+07 0 0.133947 0.994484 0.828555 6.81306e+07 0.00332884 1.48986e+07 2.13774e+07 1.50911e+07 242 1.48052e+07 5.80838e+06 0.00280772 1.52611e+07 50.7581 0.0919078 0.995693 0 50.3209 GTEX-14PJO-0011-R3a-SM-6AJBY C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 520 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990476 801787 0.951519 0.992865 0.806535 23151 1 76 0.00224423 268 0 7.62292e+07 0.0482186 5.02552e+06 7.6777e+07 5.59282e+06 23166 3.79454e+07 0 0.144984 0.992865 0.800781 7.62292e+07 0.00318923 1.6332e+07 3.39836e+07 1.64717e+07 258 1.64383e+07 7.40144e+06 0.00271559 1.65452e+07 50.1621 0.0654561 0.995254 0 50.2129 GTEX-14PJO-0011-R5a-SM-6AJBZ C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 520 BP-49918 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991061 659236 0.95231 0.993174 0.793537 24147 1 76 0.00224731 198 0 7.64533e+07 0.0474277 3.94653e+06 7.69788e+07 5.47008e+06 24171 3.80722e+07 0 0.158773 0.993174 0.788121 7.64533e+07 0.00303309 1.64567e+07 2.8618e+07 1.64838e+07 249 1.64557e+07 8.20912e+06 0.00263937 1.66505e+07 50.2941 0.0512678 0.995288 0 50.0412 GTEX-14PJO-0011-R7a-SM-664NR C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 520 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992207 855292 0.954466 0.993077 0.813056 24490 1 76 0.00250228 371 0 1.06206e+08 0.0452575 6.20503e+06 1.06946e+08 6.92715e+06 24513 5.28867e+07 0 0.141409 0.993077 0.807428 1.06206e+08 0.00335523 2.28951e+07 3.94729e+07 2.31241e+07 337 2.29389e+07 1.05099e+07 0.00292838 2.31745e+07 50.2554 0.0580201 0.993947 0 50.2488 GTEX-14PJO-0011-R8a-SM-6AJAL C1, A1 8.3 Brain Brain - Hypothalamus 0001898 520 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990437 632096 0.952932 0.992969 0.816855 22872 1 76 0.00232542 181 0 6.58715e+07 0.0468465 4.70424e+06 6.63379e+07 4.43893e+06 22887 3.27748e+07 0 0.136077 0.992969 0.811112 6.58715e+07 0.00344517 1.42101e+07 2.70331e+07 1.44276e+07 208 1.43014e+07 5.51745e+06 0.00288387 1.44986e+07 50.3423 0.0709132 0.995502 0 50.3798 GTEX-14PJO-0011-R9b-SM-62LE9 C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 520 BP-49166 RNA isolation_PAXgene Tissue miRNA 02/06/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.987615 524819 0.958879 0.991276 0.785621 24176 1 76 0.00288974 289 0 9.14443e+07 0.0406877 1.4028e+06 9.22491e+07 6.97316e+06 24207 4.54435e+07 0 0.173258 0.991276 0.778768 9.14443e+07 0.00346126 2.0238e+07 1.47482e+07 2.05023e+07 267 2.04445e+07 1.39825e+07 0.00317445 2.06041e+07 50.1944 0.0152067 0.994938 0 50.3244 GTEX-14PJO-0326-SM-6LLHT 0 C1 2 pieces; well dissected 7.2 Nerve Nerve - Tibial 0001323 643 1163 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978614 157606 0.96676 0.986583 0.714461 24036 1 76 0.00258663 153 0 7.6435e+07 0.0330046 303418 7.74745e+07 6.41358e+06 24073 3.7807e+07 0 0.252299 0.986583 0.704874 7.6435e+07 0.00391373 1.67614e+07 7.31940e+06 1.67396e+07 158 1.69541e+07 1.13598e+07 0.00324482 1.71364e+07 50.2674 0.00391636 0.994551 0 49.9674 GTEX-14PJO-0426-SM-6LLJQ 1 C1 2 pieces; well dissected; no lesions 5.7 Blood Vessel Artery - Tibial 0007610 644 1162 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 EXCLUDE 0.969829 164658 0.974476 0.978442 0.845097 21800 1 76 0.00239184 218 0 8.6025e+07 0.0252001 638710 8.79204e+07 7.86457e+06 21815 4.2497e+07 0 0.12938 0.978442 0.826878 8.6025e+07 0.0039228 1.83012e+07 1.10793e+07 1.8423e+07 208 1.85748e+07 2.01265e+07 0.00315058 1.8844e+07 50.3597 0.00726464 0.987054 0 50.1658 GTEX-14PJO-0526-SM-6EU2O 1 C1 2 pieces; no fat content 6.2 Muscle Muscle - Skeletal 0011907 648 1159 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992495 149345 0.983083 0.993856 0.871304 19127 1 76 0.00407363 142 0 7.15094e+07 0.0167155 840580 7.19514e+07 7.34301e+06 19137 3.564e+07 0 0.111779 0.993856 0.865951 7.15094e+07 0.00405905 1.59633e+07 7.72843e+06 1.59844e+07 163 1.59872e+07 1.43609e+07 0.00406635 1.60554e+07 50.1065 0.0116826 0.995217 0 50.0329 GTEX-14PJO-0526-SM-CYKOD 1 C1 2 pieces; no fat content 6.2 Muscle Muscle - Skeletal 0011907 648 1159 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 RIP-Seq GTEX-14PJO-0626-SM-6LLHH 1 C1 2 pieces 6.7 Thyroid Thyroid 0002046 655 1152 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.97796 229964 0.965756 0.986342 0.741455 24907 1 76 0.00260913 164 0 8.56824e+07 0.0339494 310069 8.68689e+07 7.24541e+06 24952 4.23663e+07 0 0.224301 0.986342 0.731329 8.56824e+07 0.00405704 1.86186e+07 9.30339e+06 1.86171e+07 186 1.88941e+07 1.3392e+07 0.00332693 1.90306e+07 50.1799 0.00356939 0.994724 0 49.998 GTEX-14PJO-0726-SM-69LO8 1 C1 2 pieces; 1 piece has gynecomastoid changes (ducts & fibrous tissue); other piece has fibrous, skeletal muscle and fat, no mammary tissue 5.8 Breast Breast - Mammary Tissue 0008367 656 1152 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.986321 214903 0.973581 0.987812 0.813473 23534 1 76 0.00197713 179 0 7.72842e+07 0.026169 1.13279e+06 7.82378e+07 4.56889e+06 23553 3.84693e+07 0 0.160108 0.987812 0.803558 7.72842e+07 0.00294717 1.69836e+07 1.02139e+07 1.70156e+07 189 1.69567e+07 1.41353e+07 0.00246142 1.71692e+07 50.3113 0.0144789 0.989304 0 50.0471 GTEX-14PJO-0826-SM-6ETZK 1 C1 2 pieces; numerous shriveled myofibers; no necrosis; 10% fibrofatty content 7.7 Heart Heart - Atrial Appendage 0006631 657 1151 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992868 138310 0.979281 0.994174 0.837866 21662 1 76 0.00410345 157 0 7.66128e+07 0.0204958 2.27744e+06 7.70618e+07 7.44507e+06 21680 3.81716e+07 0 0.141415 0.994174 0.832984 7.66128e+07 0.00413698 1.65094e+07 9.18517e+06 1.65338e+07 178 1.64595e+07 1.30618e+07 0.00412019 1.66811e+07 50.3343 0.0295535 0.99548 0 50.0368 GTEX-14PJO-0926-SM-686YT 2 C1 2 pieces; severe vascular congestion with fibrosis consistent with heart failure 6.2 Lung Lung 0008952 659 1150 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.987413 153354 0.966584 0.987962 0.769885 24698 1 76 0.00240066 144 0 6.92942e+07 0.0330855 290380 7.01385e+07 3.81656e+06 24725 3.44832e+07 0 0.196699 0.987962 0.760617 6.92942e+07 0.00298122 1.51966e+07 9.53427e+06 1.52652e+07 157 1.51868e+07 1.15579e+07 0.00269078 1.53154e+07 50.2109 0.00414009 0.98851 0 50.1127 GTEX-14PJO-1626-SM-69LPQ 1 C1 2 pieces; depleted fat comprises 50%, remainder is fibrovascular 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 670 1142 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992626 194285 0.980881 0.993952 0.850915 22157 1 76 0.00187916 168 0 7.68395e+07 0.01879 481016 7.73071e+07 4.92848e+06 22173 3.82824e+07 0 0.129965 0.993952 0.845769 7.68395e+07 0.00280807 1.70743e+07 8.22164e+06 1.71779e+07 181 1.71413e+07 1.63489e+07 0.002343 1.72149e+07 50.1071 0.00622215 0.995278 0 50.1512 GTEX-14PJO-1726-SM-68719 1 C1 2 pieces; severe central congestion & degeneration 5.8 Liver Liver 0001114 673 1139 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986375 237906 0.973252 0.987217 0.836811 20913 1 76 0.00258592 198 0 7.36651e+07 0.026619 2.66989e+06 7.46189e+07 4.11166e+06 20931 3.66639e+07 0 0.136441 0.987217 0.826114 7.36651e+07 0.00318676 1.64212e+07 1.51573e+07 1.64342e+07 245 1.62904e+07 7.08312e+06 0.00288608 1.66183e+07 50.4981 0.0357803 0.988059 0 50.0198 GTEX-14PJO-1826-SM-69LPR 1 C1 2 pieces; well trimmed 6.6 Pancreas Pancreas 0001150 675 1138 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991887 551289 0.961044 0.993765 0.772291 21948 1 76 0.00220388 124 0 7.94889e+07 0.0387795 240944 7.99877e+07 4.70214e+06 21974 3.95478e+07 0 0.188753 0.993765 0.767476 7.94889e+07 0.00325657 1.78006e+07 2.08757e+07 1.80164e+07 134 1.79627e+07 1.868e+07 0.00272923 1.8016e+07 50.0742 0.00301226 0.995642 0 50.3012 GTEX-14PJO-2526-SM-6AJBQ 1 C1 6 pieces; well trimmed, but prominent hair follicles 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 686 1128 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989318 240121 0.969476 0.991928 0.75146 23452 1 76 0.00230826 146 0 6.49435e+07 0.0303081 847734 6.5472e+07 4.56094e+06 23480 3.22978e+07 0 0.218015 0.991928 0.745394 6.49435e+07 0.00355907 1.43279e+07 1.0042e+07 1.44518e+07 152 1.44154e+07 9.61584e+06 0.00293202 1.45292e+07 50.1966 0.012948 0.994538 0 50.2152 GTEX-14PJO-2826-SM-6AJA6 2 C1 2 pieces; 7 Prostate Prostate 0002367 691 1124 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.988806 133253 0.959975 0.991034 0.712547 25351 1 76 0.00230325 153 0 7.74585e+07 0.0397985 732007 7.81592e+07 5.29883e+06 25395 3.85324e+07 0 0.247428 0.991034 0.706158 7.74585e+07 0.00331719 1.69523e+07 8.75808e+06 1.70183e+07 171 1.69876e+07 1.03952e+07 0.00280908 1.71518e+07 50.2405 0.00936559 0.993263 0 50.0971 GTEX-14PJO-2926-SM-686ZI 2 C1 4 pieces 6 Brain Brain - Cerebellum 0002037 694 1121 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990446 919777 0.931715 0.991018 0.760169 23247 1 76 0.00237151 266 0 8.41217e+07 0.0680655 4.34485e+06 8.48841e+07 4.55560e+06 23268 4.19181e+07 0 0.171546 0.991018 0.753341 8.41217e+07 0.00290438 1.77611e+07 4.67054e+07 1.80048e+07 295 1.78402e+07 6.29577e+06 0.00263779 1.79861e+07 50.2036 0.0511856 0.99159 0 50.3407 GTEX-14PJP-0001-SM-5GYEA B1 Blood Whole Blood 0013756 -36 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PJP-0001-SM-7DLEZ B1 Blood Whole Blood 0013756 -36 BP-47787 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2013 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PJP-0005-SM-7P8OM B1 9 Blood Whole Blood 0013756 -36 BP-47788 RNA isolation_PAXgene Blood RNA (Manual) 12/30/2013 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.986735 569720 0.97231 0.988432 0.840279 18715 1 76 0.00300236 272 0 1.05238e+08 0.0272586 927216 1.0647e+08 1.55179e+07 18728 5.24142e+07 0 0.132031 0.988432 0.830558 1.05238e+08 0.00388085 2.35411e+07 6.97112e+07 2.38886e+07 261 2.39204e+07 2.35539e+07 0.00344085 2.36824e+07 49.75 0.0087087 0.990128 0 50.3664 GTEX-14PK6-0003-SM-5GYF3 B1 Blood Whole Blood 0013756 -127 BP-47829 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2014 LCSET-4936 03/13/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PK6-0003-SM-7DRPF B1 Blood Whole Blood 0013756 -127 BP-47829 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2014 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PK6-0006-SM-7PC1L B1 9.2 Blood Whole Blood 0013756 -127 BP-47964 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.97307 923729 0.968314 0.975806 0.821613 19828 1 76 0.00353311 271 0 1.27951e+08 0.0305589 365758 1.31123e+08 2.01187e+07 19842 6.35648e+07 0 0.146701 0.975806 0.801735 1.27951e+08 0.00522937 2.91516e+07 1.4797e+08 2.91993e+07 276 2.93322e+07 3.18753e+07 0.00437886 2.93825e+07 50.0428 0.00278942 0.978542 0 50.0409 GTEX-14PK6-0126-SM-664O1 1 B1 2 pieces, cortex, well-preserved 7.5 Adrenal Gland Adrenal Gland 0002369 79 654 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992959 266940 0.979497 0.993922 0.833792 22884 1 76 0.00236738 274 0 1.02969e+08 0.0201319 1.42704e+06 1.03599e+08 6.78588e+06 22905 5.12907e+07 0 0.145705 0.993922 0.828724 1.02969e+08 0.00314457 2.26646e+07 1.46107e+07 2.27558e+07 290 2.26793e+07 1.73145e+07 0.0027556 2.28276e+07 50.163 0.0137747 0.994885 0 50.1004 GTEX-14PK6-0226-SM-62LF5 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 85 648 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.985025 220239 0.971284 0.989098 0.794285 23557 1 76 0.0028865 198 0 8.12097e+07 0.0285417 1.01552e+06 8.21048e+07 5.85393e+06 23582 4.03405e+07 0 0.176999 0.989098 0.785625 8.12097e+07 0.00368264 1.78437e+07 9.0859e+06 1.80283e+07 204 1.79875e+07 1.16664e+07 0.00328293 1.81922e+07 50.2828 0.0123685 0.99317 0 50.2573 GTEX-14PK6-0326-SM-6AJ9S 1 B1 2 pieces, minimal congestion 8.9 Lung Lung 0008952 87 646 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991904 131193 0.975296 0.993996 0.826982 23527 1 76 0.00219048 166 0 7.35348e+07 0.0242187 294303 7.3979e+07 5.07808e+06 23545 3.66186e+07 0 0.148314 0.993996 0.822017 7.35348e+07 0.00302405 1.63308e+07 6.08772e+06 1.64445e+07 175 1.64434e+07 1.42131e+07 0.00260639 1.64777e+07 50.0521 0.0039782 0.996088 0 50.1735 GTEX-14PK6-0426-SM-6EU1J 1 B1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 94 639 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.987388 960642 0.929762 0.989028 0.790876 22367 1 76 0.00415335 141 0 6.58522e+07 0.0699978 712446 6.65828e+07 6.61328e+06 22387 3.276e+07 0 0.138886 0.989028 0.782199 6.58522e+07 0.00430928 1.37713e+07 3.22253e+07 1.39049e+07 160 1.37567e+07 8.16766e+06 0.00423119 1.40426e+07 50.5142 0.0107002 0.990668 0 50.2415 GTEX-14PK6-0526-SM-69LOF 1 B1 2 pieces, no abnormalities 6.7 Spleen Spleen 0002106 97 636 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991658 182382 0.965749 0.992925 0.777325 23289 1 76 0.00248687 158 0 7.48484e+07 0.0332622 437097 7.53818e+07 4.45408e+06 23316 3.72513e+07 0 0.188424 0.992925 0.771826 7.48484e+07 0.00334029 1.65465e+07 8.70174e+06 1.65765e+07 178 1.65411e+07 1.10823e+07 0.00291303 1.66756e+07 50.2026 0.00579844 0.994192 0 50.0452 GTEX-14PK6-0626-SM-6AJ9P 1 B1 6 pieces, atherosis up to ~0.7mm 7.8 Blood Vessel Artery - Aorta 0001496 99 634 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992225 123472 0.975287 0.99452 0.833416 21410 1 76 0.00195107 170 0 7.74534e+07 0.0243286 274429 7.78802e+07 4.97664e+06 21427 3.8553e+07 0 0.141871 0.99452 0.828849 7.74534e+07 0.00308839 1.67344e+07 6.12946e+06 1.68748e+07 192 1.68211e+07 1.42045e+07 0.00251842 1.69561e+07 50.1998 0.00352373 0.996814 0 50.2088 GTEX-14PK6-0726-SM-6LLIX 1 B1 2 pieces, no abnormalities 7.8 Heart Heart - Atrial Appendage 0006631 102 631 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.981923 179403 0.984714 0.988791 0.859012 20928 1 76 0.00263977 269 0 9.55696e+07 0.0148939 3.16718e+06 9.6653e+07 8.39599e+06 20937 4.73698e+07 0 0.125702 0.988791 0.849383 9.55696e+07 0.0038548 2.02836e+07 2.50836e+07 2.04671e+07 299 2.05755e+07 1.41513e+07 0.00324306 2.07267e+07 50.1831 0.0327685 0.995658 0 50.2252 GTEX-14PK6-0826-SM-5ZZVO 1 B1 2 pieces, no significant interstitial fibrosis/chronic ischemic changes 7.3 Heart Heart - Left Ventricle 0006566 105 628 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994158 164768 0.986249 0.99524 0.863932 20099 1 76 0.00218941 270 0 9.51e+07 0.0134615 2.94238e+06 9.55549e+07 9.14467e+06 20109 4.74314e+07 0 0.122317 0.99524 0.859819 9.51e+07 0.00307319 2.08308e+07 2.33861e+07 2.09385e+07 283 2.07309e+07 1.51516e+07 0.00263082 2.11298e+07 50.4764 0.0307926 0.996322 0 50.129 GTEX-14PK6-0926-SM-62LF4 1 B1 2 pieces, minimal vascular elements/fascia 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 110 623 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.985685 259436 0.978528 0.99028 0.855794 21835 1 76 0.00276685 172 0 7.72528e+07 0.0211435 652714 7.8011e+07 5.89472e+06 21846 3.83552e+07 0 0.122733 0.99028 0.847476 7.72528e+07 0.00374155 1.69754e+07 7.22079e+06 1.71115e+07 201 1.71174e+07 1.35065e+07 0.00325194 1.73013e+07 50.2671 0.00836695 0.994875 0 50.1996 GTEX-14PK6-1026-SM-664NZ 1 B1 2 pieces, well preserved, numerous Islets, rep encircled, trace fat, excellent specimen 6.3 Pancreas Pancreas 0001150 112 621 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991703 234992 0.97611 0.992734 0.830815 21696 1 76 0.00229387 108 0 7.72639e+07 0.0236485 252509 7.78294e+07 4.82306e+06 21717 3.84562e+07 0 0.145295 0.992734 0.824778 7.72639e+07 0.00331191 1.75818e+07 1.99507e+07 1.78171e+07 121 1.76711e+07 2.16873e+07 0.00280236 1.78136e+07 50.2007 0.00324439 0.993766 0 50.3323 GTEX-14PK6-1126-SM-5YY93 1 B1 6 pieces, confirmed target muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 118 615 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.99275 164667 0.978547 0.99372 0.844722 22938 1 76 0.00250938 277 0 1.04328e+08 0.0211937 964883 1.04987e+08 4.61586e+06 22958 5.19726e+07 0 0.133826 0.99372 0.839417 1.04328e+08 0.00307951 2.27123e+07 1.00667e+07 2.29052e+07 315 2.27848e+07 1.83237e+07 0.00279417 2.29297e+07 50.1585 0.00919049 0.994691 0 50.2114 GTEX-14PK6-1226-SM-6EU1W 1 B1 6 pieces, confirmed target muscularis 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 121 612 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989095 199957 0.975892 0.990705 0.880344 20078 1 76 0.00409471 147 0 6.88756e+07 0.0238258 800083 6.95218e+07 7.02373e+06 20088 3.4301e+07 0 0.0955473 0.990705 0.872161 6.88756e+07 0.00424056 1.4896e+07 1.19736e+07 1.51014e+07 155 1.5029e+07 1.4173e+07 0.00416752 1.50754e+07 50.0772 0.0115084 0.992315 0 50.3424 GTEX-14PK6-1326-SM-686ZE 1 B1 6 pieces, squamous mucosa is ~0.2-0.3mm 9 Esophagus Esophagus - Mucosa 0006920 125 608 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991824 261220 0.977316 0.992509 0.837273 23379 1 76 0.00197432 278 0 1.10683e+08 0.0222258 354288 1.11519e+08 6.07783e+06 23404 5.51833e+07 0 0.140043 0.992509 0.831001 1.10683e+08 0.00247077 2.50468e+07 1.7395e+07 2.51766e+07 300 2.5128e+07 2.39371e+07 0.00222238 2.51683e+07 50.0401 0.00317694 0.993194 0 50.1292 GTEX-14PK6-1626-SM-6871I 1 B1 6 pieces, well preserved, abundant lymphoid aggregates are ~60-70%, rep delineated, valuable specimen 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 143 590 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990244 186683 0.972474 0.990904 0.813985 23927 1 76 0.0025534 212 0 8.35872e+07 0.026689 627155 8.43545e+07 4.75996e+06 23956 4.16245e+07 0 0.158489 0.990904 0.806581 8.35872e+07 0.00307228 1.85188e+07 1.12712e+07 1.87324e+07 214 1.86291e+07 1.45635e+07 0.00281266 1.86784e+07 50.0661 0.00743475 0.991564 0 50.2867 GTEX-14PK6-1726-SM-6871J 0 B1 6 pieces, mucosa well preserved, ~0.2-0.3mm, ~25% thickness 7.1 Colon Colon - Transverse 0001157 147 586 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992826 169147 0.98142 0.993465 0.865776 22032 1 76 0.00272617 284 0 9.0218e+07 0.0162095 1.60192e+06 9.08114e+07 4.67640e+06 22050 4.48851e+07 0 0.115644 0.993465 0.860119 9.0218e+07 0.00320898 2.04203e+07 1.21463e+07 2.0332e+07 303 2.0284e+07 1.38479e+07 0.00296742 2.05129e+07 50.2805 0.01764 0.994105 0 49.8917 GTEX-14PK6-1826-SM-69LOM 1 B1 6 pieces, confirmed target muscularis 8.9 Colon Colon - Sigmoid 0001159 148 585 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.994362 151915 0.97945 0.995461 0.860818 21364 1 76 0.0017885 217 0 7.94161e+07 0.0201904 594951 7.97783e+07 4.62166e+06 21377 3.95899e+07 0 0.118633 0.995461 0.85691 7.94161e+07 0.00251429 1.72302e+07 6.70336e+06 1.72716e+07 228 1.72292e+07 1.51854e+07 0.00215099 1.73534e+07 50.1796 0.00745756 0.996559 0 50.0599 GTEX-14PK6-1926-SM-6ETZU 0 B1 6 pieces, focal dermal fat up to ~1mm, squamous epithelium is ~40 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 245 488 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990586 139845 0.971365 0.991963 0.830915 23371 1 76 0.0041815 168 0 7.40464e+07 0.0284626 833044 7.46463e+07 6.75588e+06 23389 3.68503e+07 0 0.14045 0.991963 0.824236 7.40464e+07 0.00434073 1.61789e+07 7.34454e+06 1.62447e+07 185 1.61348e+07 1.08756e+07 0.004261 1.63887e+07 50.3903 0.0111599 0.99334 0 50.1014 GTEX-14PK6-2026-SM-6LLHP 0 B1 2 pieces, ~10-15% fascia/vascular elements, rep delineated 7 Adipose Tissue Adipose - Subcutaneous 0002190 246 487 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978133 175024 0.977124 0.986593 0.814622 23689 1 76 0.00246547 209 0 8.48814e+07 0.022521 705252 8.60348e+07 7.67397e+06 23719 4.19683e+07 0 0.162503 0.986593 0.803701 8.48814e+07 0.00393342 1.86493e+07 6.97976e+06 1.86183e+07 210 1.88679e+07 1.49794e+07 0.00319315 1.90897e+07 50.2923 0.00819729 0.995053 0 49.9584 GTEX-14PK6-2126-SM-6ETZV 0 B1 2 pieces, ~5-10% interstitial fat, rep delineated 7 Muscle Muscle - Skeletal 0011907 249 484 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992702 224859 0.985891 0.994043 0.884243 18047 1 76 0.00406317 156 0 7.92219e+07 0.013803 1.40666e+06 7.96967e+07 8.19229e+06 18051 3.94824e+07 0 0.101648 0.994043 0.878976 7.92219e+07 0.00399725 1.71161e+07 1.16575e+07 1.70342e+07 189 1.69877e+07 1.63549e+07 0.00403025 1.72734e+07 50.4169 0.0176502 0.995384 0 49.8801 GTEX-14PK6-2326-SM-69LOG 0 B1 2 pieces, mild atherosis, focally calcified (delineated); rim of fibrous tissue up to ~1.5mm 7.7 Blood Vessel Artery - Tibial 0007610 254 479 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993087 164070 0.977361 0.994367 0.822688 22254 1 76 0.00185917 201 0 8.62492e+07 0.0222728 330335 8.67377e+07 5.08217e+06 22269 4.29528e+07 0 0.154673 0.994367 0.818054 8.62492e+07 0.00275894 1.88816e+07 6.38883e+06 1.89221e+07 212 1.88544e+07 1.66284e+07 0.00230848 1.90604e+07 50.2717 0.00380844 0.995648 0 50.0536 GTEX-14PK6-5019-SM-AN432 B1 Muscle Muscle - Skeletal 0011907 250 ChIP-Seq GTEX-14PKU-0004-SM-6RBLN B1 Blood Whole Blood 0013756 -115 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PKU-0004-SM-7DLF7 B1 Blood Whole Blood 0013756 -115 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-6363 01/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PKU-0005-SM-9KNTL B1 8.9 Blood Whole Blood 0013756 -115 BP-47964 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.980216 746895 0.960617 0.981572 0.787375 18943 1 76 0.00258768 157 0 9.95196e+07 0.0387861 238880 1.01388e+08 1.07878e+07 18959 4.95695e+07 0 0.173242 0.981572 0.772865 9.95196e+07 0.00402967 2.1998e+07 7.60805e+07 2.22233e+07 193 2.22345e+07 2.12842e+07 0.00330768 2.21314e+07 49.8838 0.0023561 0.982927 0 50.2547 GTEX-14PKU-0008-SM-E9U4G B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 308 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.993015 630524 0.980756 0.994039 0.86564 20289 1 76 0.00142021 229 0 9.78952e+07 0.0189266 166505 9.84822e+07 3.58016e+06 20305 4.88e+07 0 0.115116 0.994039 0.86048 9.78952e+07 0.00218578 2.20958e+07 1.15279e+07 2.22185e+07 253 2.22609e+07 2.62689e+07 0.0018026 2.21528e+07 49.8783 0.00169071 0.995063 0 50.1385 GTEX-14PKU-0126-SM-6LLHV 0 B1 6 pieces, no dermal fat. Squamous epithelium is ~40 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 137 893 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979542 161487 0.971034 0.987387 0.791111 23241 1 76 0.00236884 225 0 8.30268e+07 0.0287305 360660 8.40874e+07 7.03062e+06 23270 4.1086e+07 0 0.179923 0.987387 0.781133 8.30268e+07 0.00378181 1.81803e+07 8.6308e+06 1.80877e+07 204 1.83116e+07 1.39893e+07 0.00306971 1.85893e+07 50.3762 0.00428911 0.995231 0 49.8724 GTEX-14PKU-0226-SM-6EU16 1 B1 2 pieces, ~10% fascia/vascular elements; rep delineated 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 140 890 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991326 162619 0.979307 0.992758 0.84996 21170 1 76 0.0039376 172 0 7.21034e+07 0.0204056 842364 7.26294e+07 7.28007e+06 21182 3.5914e+07 0 0.129347 0.992758 0.843804 7.21034e+07 0.00399521 1.59428e+07 8.72146e+06 1.60703e+07 187 1.59504e+07 1.10604e+07 0.00396637 1.61659e+07 50.3356 0.0115981 0.99419 0 50.1991 GTEX-14PKU-0326-SM-6AJA7 1 B1 2 pieces, no significant abnormalities 7.4 Thyroid Thyroid 0002046 143 887 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992014 113779 0.967821 0.994072 0.77585 23338 1 76 0.00187069 156 0 7.13755e+07 0.0318835 297438 7.18011e+07 4.91134e+06 23365 3.55468e+07 0 0.191971 0.994072 0.771251 7.13755e+07 0.00273346 1.55746e+07 6.93581e+06 1.56882e+07 166 1.56363e+07 1.17644e+07 0.00230118 1.57623e+07 50.2007 0.00414252 0.996131 0 50.1816 GTEX-14PKU-0426-SM-6EU1P 1 B1 2 pieces, fibrous mastopathy. Inactive ductal elements, rep delineated 9.9 Breast Breast - Mammary Tissue 0008367 154 876 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991537 109019 0.978067 0.992938 0.846724 22677 1 76 0.00404875 145 0 6.7269e+07 0.021504 322192 6.77474e+07 6.84612e+06 22693 3.35018e+07 0 0.131343 0.992938 0.840744 6.7269e+07 0.00412445 1.48785e+07 6.41426e+06 1.49696e+07 150 1.4915e+07 1.31313e+07 0.00408654 1.50302e+07 50.1924 0.00475579 0.99434 0 50.1527 GTEX-14PKU-0526-SM-6871A 1 B1 2 pieces, no abnormalities 9.3 Spleen Spleen 0002106 155 875 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990559 225582 0.967278 0.99116 0.80789 23539 1 76 0.0023772 207 0 8.38946e+07 0.0319835 406952 8.46429e+07 4.62355e+06 23566 4.17741e+07 0 0.159388 0.99116 0.800748 8.38946e+07 0.00288991 1.84848e+07 1.01123e+07 1.8611e+07 231 1.85285e+07 1.35105e+07 0.0026334 1.86193e+07 50.1222 0.00480787 0.99176 0 50.1702 GTEX-14PKU-0626-SM-6EU1Q 1 B1 2 pieces, ~40% interstitial fat, rep delineated; Islets well preserved, moderate numbers, rep. encircled 7.5 Pancreas Pancreas 0001150 157 873 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992188 174058 0.976339 0.993575 0.858624 20985 1 76 0.00445138 95 0 6.80818e+07 0.0233856 188647 6.8522e+07 7.0743e+06 21003 3.39203e+07 0 0.117716 0.993575 0.853107 6.80818e+07 0.00447461 1.55111e+07 1.90915e+07 1.56889e+07 105 1.56223e+07 1.98839e+07 0.00446298 1.56757e+07 50.0853 0.00275308 0.994961 0 50.285 GTEX-14PKU-0926-SM-69LPS 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 184 846 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993677 240631 0.978351 0.995091 0.868524 21264 1 76 0.00163358 206 0 7.4531e+07 0.0213656 742584 7.48987e+07 4.54071e+06 21276 3.71462e+07 0 0.109827 0.995091 0.86426 7.4531e+07 0.00242959 1.62729e+07 6.74335e+06 1.63544e+07 226 1.629e+07 1.34323e+07 0.00203102 1.64371e+07 50.2247 0.00991451 0.996504 0 50.1249 GTEX-14PKU-1026-SM-6EU12 1 B1 6 pieces, confirmed target muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 175 855 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992061 162495 0.977288 0.993372 0.85817 21936 1 76 0.0038907 215 0 8.30086e+07 0.0223659 798373 8.35624e+07 7.66856e+06 21950 4.13564e+07 0 0.119117 0.993372 0.852482 8.30086e+07 0.00383653 1.80359e+07 6.61056e+06 1.80985e+07 229 1.80373e+07 1.49665e+07 0.00386365 1.82029e+07 50.2284 0.00955421 0.994683 0 50.0867 GTEX-14PKU-1126-SM-69LOU 1 B1 6 pieces, well-preserved mucosa up to ~1mm, ~20% thickness 7.7 Stomach Stomach 0000945 187 843 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99437 126854 0.977091 0.995418 0.849867 22014 1 76 0.00163315 211 0 8.12256e+07 0.0226219 680535 8.15995e+07 4.8895e+06 22033 4.04948e+07 0 0.127224 0.995418 0.845973 8.12256e+07 0.00235571 1.77338e+07 6.98722e+06 1.7817e+07 246 1.77335e+07 1.47435e+07 0.00199405 1.7898e+07 50.2308 0.00833994 0.996467 0 50.1171 GTEX-14PKU-1226-SM-686ZM 1 B1 2 pieces, post menopausal involutional changes 8.1 Ovary Ovary 0000992 191 839 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.99315 244677 0.972477 0.993765 0.814921 23208 1 76 0.00180718 283 0 1.09048e+08 0.0272348 226802 1.09733e+08 5.81257e+06 23242 5.43675e+07 0 0.157556 0.993765 0.80984 1.09048e+08 0.00230702 2.40972e+07 1.13446e+07 2.42155e+07 310 2.41396e+07 2.17157e+07 0.00205695 2.42398e+07 50.1035 0.00206686 0.99438 0 50.1224 GTEX-14PKU-1326-SM-6871B 1 B1 6 pieces, squamous epithelium is ~0.25mm 9.2 Vagina Vagina 0000996 193 837 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991893 269534 0.97677 0.992705 0.831277 22431 1 76 0.00218882 277 0 9.37268e+07 0.0228486 296017 9.44156e+07 4.94432e+06 22450 4.67141e+07 0 0.145493 0.992705 0.825213 9.37268e+07 0.00273705 2.09797e+07 1.5841e+07 2.10888e+07 276 2.10476e+07 1.82403e+07 0.00246271 2.10935e+07 50.0545 0.00313526 0.993516 0 50.1297 GTEX-14PKU-1626-SM-6871C 1 B1 6 pieces, wlle preserved mucosa; target lymphoid aggregates are ~10% tissue, delineated 7.7 Small Intestine Small Intestine - Terminal Ileum 0001211 203 827 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991787 259918 0.971568 0.992501 0.800283 24619 1 76 0.00210253 280 0 9.84027e+07 0.0279727 924528 9.91462e+07 5.08255e+06 24655 4.903e+07 0 0.171286 0.992501 0.794282 9.84027e+07 0.00263423 2.18063e+07 1.25368e+07 2.19035e+07 307 2.17807e+07 1.52457e+07 0.00236819 2.19952e+07 50.245 0.0093249 0.993216 0 50.1112 GTEX-14PKU-2126-SM-7LT8A 0 B1 2 pieces, adipose tissue, fascia/ vasular elements are ~40%, rep delineated. Switched with 2225 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 312 718 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 EXCLUDE 0.990866 246724 0.974757 0.993089 0.802536 22986 1 76 0.00272613 282 0 1.01702e+08 0.0248569 975650 1.02409e+08 1.1483e+07 23012 5.05814e+07 0 0.172222 0.993089 0.796989 1.01702e+08 0.00362758 2.2279e+07 1.2955e+07 2.24338e+07 271 2.25404e+07 1.76006e+07 0.00317585 2.23874e+07 49.8297 0.00952696 0.995311 0 50.1731 GTEX-14PKU-2226-SM-7LG5T 0 B1 2 pieces, small muscular artery, partial rim of adherent fibrous tissue up to ~1.5mm, delineated. Switched with 2125 6.4 Blood Vessel Artery - Tibial 0007610 313 717 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978702 457234 0.97573 0.986374 0.842377 21670 1 76 0.00319993 210 0 9.01525e+07 0.0238604 538848 9.13979e+07 1.28314e+07 21692 4.45553e+07 0 0.133353 0.986374 0.830899 9.01525e+07 0.00596277 1.92226e+07 7.8421e+06 1.9348e+07 224 1.96903e+07 1.78141e+07 0.0045706 1.9515e+07 49.7765 0.00589562 0.994046 0 50.1626 GTEX-14PKU-5016-SM-AN42Y B1 Muscle Muscle - Skeletal 0011907 305 ChIP-Seq GTEX-14PKV-0002-SM-6RBLM B1 Blood Whole Blood 0013756 373 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PKV-0002-SM-7DLG9 B1 Blood Whole Blood 0013756 373 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PKV-0006-SM-9MQL3 B1 7.8 Blood Whole Blood 0013756 373 BP-47964 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.981535 488928 0.954167 0.983881 0.754341 18709 1 76 0.00603334 108 0 5.73048e+07 0.0453807 213732 5.82436e+07 7.50985e+06 18723 2.84846e+07 0 0.199826 0.983881 0.742181 5.73048e+07 0.00772232 1.24696e+07 3.61817e+07 1.26982e+07 119 1.27384e+07 1.05251e+07 0.00687582 1.25677e+07 49.6627 0.00366962 0.986226 0 50.4542 GTEX-14PKV-0008-SM-E9U4H B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 359 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991429 872668 0.948777 0.992534 0.829788 19819 1 76 0.00143905 187 0 9.39347e+07 0.0508482 303285 9.46413e+07 3.19304e+06 19829 4.68209e+07 0 0.118989 0.992534 0.823593 9.39347e+07 0.0023292 2.03463e+07 4.21644e+07 2.07743e+07 197 2.08094e+07 2.41096e+07 0.00188363 2.04192e+07 49.5268 0.00320457 0.99364 0 50.5205 GTEX-14PKV-0626-SM-6AJA2 1 B1 2 pieces, no abnormalities 6.2 Thyroid Thyroid 0002046 366 1025 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990604 176433 0.96835 0.993022 0.7436 23129 1 76 0.00211438 149 0 7.51064e+07 0.0314076 214705 7.56342e+07 4.89509e+06 23162 3.73828e+07 0 0.224751 0.993022 0.738411 7.51064e+07 0.00323165 1.64575e+07 7.71177e+06 1.65658e+07 167 1.65527e+07 1.11613e+07 0.00267165 1.66382e+07 50.1288 0.00283873 0.99544 0 50.164 GTEX-14PKV-0726-SM-686ZF 1 B1 2 pieces, cortex, ~10% interstitial/adherent fat/vascular elements, rep delineated 7.9 Adrenal Gland Adrenal Gland 0002369 372 1019 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993516 370770 0.978156 0.99429 0.836847 23477 1 76 0.00202759 374 0 1.22822e+08 0.0214514 1.92327e+06 1.23527e+08 6.56816e+06 23510 6.1228e+07 0 0.141309 0.99429 0.832069 1.22822e+08 0.00253263 2.70666e+07 1.95758e+07 2.71486e+07 333 2.70391e+07 2.11968e+07 0.00227992 2.72752e+07 50.2174 0.0155697 0.995065 0 50.0757 GTEX-14PKV-0926-SM-6AJB4 1 B1 2 pieces, well preserved, Islets well visualized, rep delineated. Minimal fat; good specimen 7.1 Pancreas Pancreas 0001150 377 1014 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990078 334982 0.974563 0.993265 0.832051 20823 1 76 0.00234883 117 0 6.60428e+07 0.0252493 152408 6.64906e+07 4.46729e+06 20838 3.28287e+07 0 0.142512 0.993265 0.826448 6.60428e+07 0.00391018 1.50051e+07 1.54593e+07 1.52355e+07 122 1.52032e+07 1.85651e+07 0.003127 1.52481e+07 50.0738 0.00229217 0.996453 0 50.381 GTEX-14PKV-1126-SM-6LLJ1 1 B1 6 pieces only trace dermal fat; squamous epithelium is ~70 microns 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 379 1012 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.973834 229515 0.968206 0.983493 0.774305 24907 1 76 0.00254071 213 0 9.4266e+07 0.0316251 904482 9.58482e+07 8.44679e+06 24943 4.65387e+07 0 0.193901 0.983493 0.761523 9.4266e+07 0.00419264 2.06452e+07 1.08477e+07 2.06557e+07 255 2.09628e+07 1.3485e+07 0.00335857 2.12224e+07 50.3076 0.00943661 0.993152 0 50.0127 GTEX-14PKV-1226-SM-6871T 1 B1 2 pieces, incidental follicular cysts, rep. delineated viable eggs still visible, rep encircled 8 Ovary Ovary 0000992 386 1005 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991274 284197 0.963997 0.992039 0.743437 23502 1 76 0.00212876 214 0 9.15174e+07 0.0357473 123728 9.22518e+07 4.99319e+06 23551 4.55886e+07 0 0.22056 0.992039 0.737519 9.15174e+07 0.00267144 2.00085e+07 1.10472e+07 2.01388e+07 214 2.00927e+07 1.5985e+07 0.00239989 2.01264e+07 50.0419 0.0013412 0.992804 0 50.1623 GTEX-14PKV-1426-SM-5YYB9 1 B1 2 pieces, mainly myometrium; 2-3mm strip of endometrium-glands/stroma, delineated, good specimen 7.2 Uterus Uterus 0000995 388 1003 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.988311 205816 0.9722 0.989426 0.792149 23565 1 76 0.00268142 281 0 1.04716e+08 0.0274161 188561 1.05835e+08 4.71719e+06 23602 5.21488e+07 0 0.180051 0.989426 0.783773 1.04716e+08 0.00324867 2.27688e+07 8.69037e+06 2.29433e+07 279 2.2901e+07 1.91243e+07 0.00296473 2.29224e+07 50.0234 0.00178165 0.99054 0 50.1909 GTEX-14PKV-1526-SM-664O2 0 B1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 393 998 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992524 201611 0.978336 0.99328 0.84645 22222 1 76 0.00228084 276 0 9.85815e+07 0.0213894 683942 9.92485e+07 6.15552e+06 22242 4.90939e+07 0 0.131885 0.99328 0.840763 9.85815e+07 0.00308556 2.12897e+07 8.58848e+06 2.15351e+07 305 2.14256e+07 1.74541e+07 0.00268289 2.14685e+07 50.05 0.00689121 0.994036 0 50.2865 GTEX-14PKV-1726-SM-6871U 1 B1 6 pieces, squamous mucosa is ~0.3-0.4mm, ~25-50% thickness 9.6 Esophagus Esophagus - Mucosa 0006920 395 996 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992364 264389 0.979367 0.993087 0.866866 21457 1 76 0.00209264 276 0 9.21565e+07 0.0201237 402867 9.2798e+07 5.0569e+06 21468 4.59374e+07 0 0.112502 0.993087 0.860873 9.21565e+07 0.00263239 2.07786e+07 1.60474e+07 2.092e+07 268 2.08614e+07 2.07033e+07 0.00236232 2.09056e+07 50.0528 0.00434133 0.99381 0 50.1696 GTEX-14PKV-1826-SM-69LO9 1 B1 6 pieces, well preserved mucosa is 60-90% thickness, good specimen 7.5 Stomach Stomach 0000945 399 992 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.986973 166945 0.982263 0.98824 0.856061 22279 1 76 0.001688 372 0 9.72876e+07 0.0172936 986080 9.84453e+07 6.22691e+06 22302 4.84832e+07 0 0.126202 0.98824 0.845993 9.72876e+07 0.00250952 2.24288e+07 9.59521e+07 2.26501e+07 297 2.26169e+07 2.642e+07 0.00209823 2.25871e+07 49.967 0.0100165 0.989506 0 50.2454 GTEX-14PKV-1926-SM-686YU 1 B1 6 pieces, confirmed target muscularis, trace degenerated lamina propria on section, delineated 6.9 Colon Colon - Sigmoid 0001159 409 982 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988345 174982 0.969714 0.98906 0.784259 23008 1 76 0.0022464 151 0 7.01769e+07 0.0300256 445012 7.09531e+07 3.74586e+06 23033 3.4939e+07 0 0.185454 0.98906 0.775679 7.01769e+07 0.00289057 1.52083e+07 7.90808e+06 1.52591e+07 170 1.51613e+07 1.03721e+07 0.00256825 1.5354e+07 50.3158 0.00627192 0.989775 0 50.0834 GTEX-14PKV-2026-SM-6AJ9A 1 B1 6 pieces, well preserved, target lymphoid aggregates are ~60% of tissue, excellent specimen 7 Small Intestine Small Intestine - Terminal Ileum 0001211 416 975 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.987455 202289 0.974251 0.99007 0.798678 23610 1 76 0.00225237 198 0 8.12435e+07 0.0253413 873991 8.20584e+07 5.4722e+06 23638 4.04241e+07 0 0.175574 0.99007 0.790747 8.12435e+07 0.00352785 1.80305e+07 1.18625e+07 1.81e+07 206 1.80928e+07 1.23042e+07 0.00288843 1.82392e+07 50.2015 0.0106508 0.992685 0 50.0961 GTEX-14PKV-2126-SM-664O3 1 B1 6 pieces, well preserved mucosa up to ~0.4mm, ~25% thickness 7 Colon Colon - Transverse 0001157 417 974 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.992195 227526 0.976677 0.993059 0.823446 23751 1 76 0.00240178 292 0 1.04796e+08 0.0227366 1.28883e+06 1.05529e+08 6.35993e+06 23778 5.21955e+07 0 0.153231 0.993059 0.817731 1.04796e+08 0.00319233 2.32782e+07 1.53093e+07 2.34403e+07 303 2.33587e+07 1.76696e+07 0.00279671 2.34463e+07 50.0936 0.012213 0.993923 0 50.1735 GTEX-14PN3-0004-SM-6RBLO B1 Blood Whole Blood 0013756 -74 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PN3-0004-SM-7DLGK B1 Blood Whole Blood 0013756 -74 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PN3-0006-SM-7SB6O B1 9 Blood Whole Blood 0013756 -74 BP-47964 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988917 798725 0.940542 0.991477 0.69257 20142 1 76 0.00293069 133 0 9.12911e+07 0.0589951 163009 9.20759e+07 9.62587e+06 20178 4.54123e+07 0 0.247972 0.991477 0.686667 9.12911e+07 0.0045065 1.95606e+07 5.00529e+07 1.97555e+07 160 1.98573e+07 1.54653e+07 0.00371656 1.96902e+07 49.7887 0.00177038 0.994037 0 50.2479 GTEX-14PN3-0008-SM-E76Q7 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 289 BP-47884 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994053 817103 0.953244 0.995347 0.828007 21249 1 76 0.00150449 292 0 1.27682e+08 0.0463978 285400 1.28279e+08 7.72824e+06 21272 6.36574e+07 0 0.125237 0.995347 0.824154 1.27682e+08 0.00208158 2.77275e+07 5.17838e+07 2.82977e+07 314 2.83495e+07 3.28523e+07 0.00179266 2.78366e+07 49.5436 0.00222484 0.996642 0 50.5089 GTEX-14PN3-0126-SM-6AJAU 0 B1 2 pieces; 10 & 20% internal fat 7.9 Pancreas Pancreas 0001150 76 709 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991771 185683 0.982017 0.993833 0.879071 20636 1 76 0.0020442 110 0 8.3313e+07 0.0176995 230311 8.383e+07 5.9015e+06 20648 4.15047e+07 0 0.102947 0.993833 0.87365 8.3313e+07 0.00285805 1.93203e+07 3.00467e+07 1.95638e+07 132 1.95122e+07 2.67753e+07 0.00245028 1.95445e+07 50.0414 0.00274736 0.995895 0 50.313 GTEX-14PN3-0226-SM-6871K 1 B1 2 pieces; no congestion 6.6 Spleen Spleen 0002106 79 706 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993648 280434 0.962648 0.994425 0.744629 24105 1 76 0.00212375 162 0 8.26755e+07 0.0365226 382550 8.31391e+07 4.14742e+06 24143 4.11819e+07 0 0.218018 0.994425 0.740478 8.26755e+07 0.00260229 1.82485e+07 8.9129e+06 1.81316e+07 193 1.80704e+07 1.23549e+07 0.00236283 1.83705e+07 50.4118 0.00460133 0.995201 0 49.8394 GTEX-14PN3-0326-SM-6EU1X 0 B1 2 pieces; 10% & <5% fibrous content 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 82 703 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990953 178413 0.982651 0.992478 0.884907 21104 1 76 0.00402064 210 0 7.7651e+07 0.0171039 1.4265e+06 7.82396e+07 6.96438e+06 21115 3.86855e+07 0 0.0977441 0.992478 0.878251 7.7651e+07 0.00410338 1.7127e+07 1.06985e+07 1.73541e+07 214 1.72114e+07 1.39593e+07 0.00406195 1.73864e+07 50.2529 0.0182324 0.994002 0 50.3294 GTEX-14PN3-0426-SM-6LLIY 0 B1 2 pieces; 1 with focal plaque & 1mm external fibrofatty collar; 1 with large (2.6 mm) calcified plaque 6.9 Blood Vessel Artery - Coronary 0001621 90 695 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977072 215968 0.97346 0.986176 0.816524 23400 1 76 0.00241397 273 0 9.02243e+07 0.0263043 705601 9.14891e+07 7.7435e+06 23426 4.45979e+07 0 0.156936 0.986176 0.805237 9.02243e+07 0.00395772 1.96209e+07 8.53512e+06 1.96771e+07 261 1.99306e+07 1.44643e+07 0.00317872 2.01439e+07 50.2662 0.00771241 0.99528 0 50.0715 GTEX-14PN3-0526-SM-69LQF 0 B1 2 pieces; no lesions 8.2 Heart Heart - Left Ventricle 0006566 93 692 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.994171 170301 0.98622 0.995291 0.86495 19419 1 76 0.00180053 266 0 9.19047e+07 0.0135368 2.07027e+06 9.23395e+07 5.66781e+06 19431 4.58347e+07 0 0.12127 0.995291 0.860877 9.19047e+07 0.00250053 2.02178e+07 2.42981e+07 2.00234e+07 305 1.98361e+07 1.43777e+07 0.00215014 2.05021e+07 50.8254 0.0224202 0.996411 0 49.7584 GTEX-14PN3-0726-SM-6EU14 0 B1 2 pieces: 1 free of fat, other has 40% fat 8.1 Heart Heart - Atrial Appendage 0006631 96 689 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990139 224506 0.977975 0.991638 0.837072 21993 1 76 0.00412945 267 0 8.96494e+07 0.0215969 1.71425e+06 9.04053e+07 8.90798e+06 22010 4.46572e+07 0 0.140904 0.991638 0.830072 8.96494e+07 0.00407637 1.94233e+07 1.39233e+07 1.94318e+07 261 1.92842e+07 1.40686e+07 0.00410295 1.97128e+07 50.5495 0.0189619 0.993137 0 50.011 GTEX-14PN3-0826-SM-69LOS 0 B1 2 pieces 7 Thyroid Thyroid 0002046 97 688 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992814 207417 0.97008 0.99408 0.762356 23628 1 76 0.0018698 206 0 8.6738e+07 0.0296485 302329 8.72545e+07 5.52235e+06 23665 4.32285e+07 0 0.207723 0.99408 0.757844 8.6738e+07 0.00267365 1.91323e+07 8.70692e+06 1.91275e+07 219 1.91044e+07 1.40393e+07 0.00227122 1.92559e+07 50.1974 0.00346491 0.995346 0 49.9937 GTEX-14PN3-1126-SM-69LOR 1 B1 4 pieces 7.1 Esophagus Esophagus - Muscularis 0004648 109 676 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993607 235138 0.978209 0.994844 0.851588 21872 1 76 0.00177886 284 0 8.86773e+07 0.0214334 727726 8.91369e+07 5.36016e+06 21889 4.42001e+07 0 0.126622 0.994844 0.847197 8.86773e+07 0.0025109 1.92756e+07 8.66584e+06 1.93361e+07 273 1.92848e+07 1.61723e+07 0.00214442 1.94284e+07 50.1854 0.00816414 0.996082 0 50.0783 GTEX-14PN3-1226-SM-69LOW 1 B1 6 pieces 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 114 671 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993994 166505 0.978043 0.995087 0.846262 21644 1 76 0.00175891 218 0 7.9369e+07 0.0216115 564601 7.97609e+07 4.61718e+06 21661 3.95659e+07 0 0.131781 0.995087 0.842104 7.9369e+07 0.00249108 1.73601e+07 6.592e+06 1.73764e+07 232 1.73292e+07 1.45702e+07 0.00212459 1.74896e+07 50.2303 0.00707867 0.996179 0 50.0236 GTEX-14PN3-1326-SM-6AJ9U 1 B1 6 pieces; well preserved mucosa; full thickness specimens 6.6 Stomach Stomach 0000945 119 666 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991483 153440 0.975464 0.993999 0.835663 22163 1 76 0.00191404 172 0 7.5291e+07 0.0242517 721030 7.57456e+07 4.95179e+06 22183 3.74773e+07 0 0.139801 0.993999 0.830648 7.5291e+07 0.00314508 1.63771e+07 6.83301e+06 1.65332e+07 194 1.646e+07 1.29915e+07 0.002528 1.66279e+07 50.2538 0.00951911 0.996514 0 50.2371 GTEX-14PN3-1426-SM-686Z8 1 B1 2 pieces; prominent medullary component; 10% external fat 8.5 Adrenal Gland Adrenal Gland 0002369 122 663 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992654 188749 0.977522 0.993385 0.84465 23129 1 76 0.0020342 270 0 8.88713e+07 0.0220295 1.45176e+06 8.94631e+07 4.53225e+06 23150 4.42928e+07 0 0.132872 0.993385 0.839062 8.88713e+07 0.00262179 1.97204e+07 1.14732e+07 1.98303e+07 291 1.97158e+07 1.44685e+07 0.00232778 1.98949e+07 50.226 0.0162275 0.994116 0 50.139 GTEX-14PN3-1526-SM-6ETZM 0 B1 2 fragmented pieces; atrophic with large corpora amylacia (>50%) 8.4 Ovary Ovary 0000992 124 661 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991409 212423 0.971928 0.992889 0.800347 22623 1 76 0.00404838 174 0 8.16581e+07 0.0277688 169691 8.22429e+07 8.18922e+06 22650 4.06714e+07 0 0.171581 0.992889 0.794656 8.16581e+07 0.00401788 1.80844e+07 8.09921e+06 1.81518e+07 171 1.81278e+07 1.6129e+07 0.00403316 1.82282e+07 50.1381 0.00206329 0.994368 0 50.0929 GTEX-14PN3-1626-SM-6AJAV 0 B1 6 pieces; atrophic with thin epithelium 8.9 Vagina Vagina 0000996 125 660 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991282 189885 0.97664 0.99329 0.819875 22188 1 76 0.00216758 176 0 7.61876e+07 0.0228741 219339 7.67023e+07 5.51253e+06 22206 3.79478e+07 0 0.156765 0.99329 0.814373 7.61876e+07 0.00293655 1.7117e+07 1.11324e+07 1.72133e+07 174 1.72401e+07 1.54794e+07 0.00255129 1.72359e+07 49.994 0.00285962 0.995297 0 50.1402 GTEX-14PN3-1926-SM-6EU1Y 1 B1 4 pieces 8.5 Colon Colon - Sigmoid 0001159 137 648 BP-49672 RNA Extraction from Paxgene-derived Lysate Plate Based 02/20/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992756 156861 0.977077 0.994064 0.8519 21326 1 76 0.00405478 144 0 6.36484e+07 0.0225655 453616 6.40285e+07 6.48185e+06 21338 3.17065e+07 0 0.125176 0.994064 0.846843 6.36484e+07 0.00396783 1.38366e+07 5.89866e+06 1.38924e+07 142 1.38407e+07 1.17993e+07 0.00401136 1.39721e+07 50.2361 0.0070846 0.995371 0 50.1007 GTEX-14PN3-2026-SM-68729 1 B1 5 pieces, 4 with plentiful lymphoid tissue [outlined]; well dissected without muscle 5.8 Small Intestine Small Intestine - Terminal Ileum 0001211 147 638 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990224 272020 0.968982 0.990909 0.780132 23377 1 76 0.00227975 279 0 8.67507e+07 0.0306002 1.07257e+06 8.75467e+07 4.78068e+06 23406 4.32212e+07 0 0.18885 0.990909 0.773039 8.67507e+07 0.00281687 1.91843e+07 1.59764e+07 1.92387e+07 261 1.91026e+07 1.16556e+07 0.00254813 1.93733e+07 50.3518 0.0122514 0.991594 0 50.0707 GTEX-14PN3-2426-SM-6LLHS 0 B1 6 pieces; <10% dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 289 496 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977343 164915 0.972221 0.986161 0.800202 23932 1 76 0.00243474 200 0 8.27376e+07 0.0275313 558240 8.38987e+07 7.31234e+06 23961 4.09048e+07 0 0.172019 0.986161 0.789128 8.27376e+07 0.00400747 1.80044e+07 8.16319e+06 1.79921e+07 200 1.82511e+07 1.39658e+07 0.00321407 1.84469e+07 50.2668 0.00665374 0.994979 0 49.9829 GTEX-14PN3-2526-SM-6EU15 0 B1 3 pieces; <10% fibrous content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 292 493 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990611 152698 0.976888 0.992071 0.826346 21577 1 76 0.00409058 166 0 7.55317e+07 0.0228141 732644 7.61354e+07 7.26845e+06 21596 3.76061e+07 0 0.150542 0.992071 0.819794 7.55317e+07 0.00421864 1.66682e+07 7.05522e+06 1.67115e+07 180 1.66455e+07 1.22661e+07 0.00415452 1.68413e+07 50.2923 0.00962291 0.993531 0 50.0649 GTEX-14PN3-2626-SM-6EU17 1 B1 2 pieces; 5% fat 6.8 Nerve Nerve - Tibial 0001323 296 489 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991212 183335 0.970305 0.992525 0.779384 23029 1 76 0.00409905 170 0 7.22459e+07 0.0294126 317218 7.27901e+07 7.05507e+06 23053 3.59498e+07 0 0.19092 0.992525 0.773558 7.22459e+07 0.00422469 1.59649e+07 6.34605e+06 1.59842e+07 159 1.59143e+07 1.14639e+07 0.00416179 1.61305e+07 50.3374 0.00435798 0.993838 0 50.0302 GTEX-14PN3-5001-SM-AN434 B1 Heart Heart - Left Ventricle 0006566 93 ChIP-Seq GTEX-14PN3-5013-SM-AN435 B1 Muscle Muscle - Skeletal 0011907 285 ChIP-Seq GTEX-14PN4-0001-SM-6RBKN B1 Blood Whole Blood 0013756 1081 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PN4-0001-SM-7DRP6 B1 Blood Whole Blood 0013756 1081 BP-47870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2014 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PN4-0005-SM-7PC21 B1 7.3 Blood Whole Blood 0013756 1081 BP-47964 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.950747 222220 0.989646 0.955128 0.831225 15154 1 76 0.00318195 87 0 8.57997e+07 0.0081761 130044 8.98306e+07 1.45295e+07 15156 4.24753e+07 0 0.158421 0.955128 0.793927 8.57997e+07 0.0054796 2.07879e+07 1.61945e+08 2.0501e+07 126 2.05919e+07 2.53665e+07 0.00432551 2.1102e+07 50.6118 0.00144766 0.95951 0 49.6526 GTEX-14PN4-0008-SM-E9U4N B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1046 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.993117 421756 0.975861 0.993939 0.8586 20307 1 76 0.00149068 184 0 8.06161e+07 0.0238082 290167 8.11077e+07 2.72989e+06 20323 4.02072e+07 0 0.11726 0.993939 0.853396 8.06161e+07 0.00225133 1.80564e+07 1.26334e+07 1.81938e+07 176 1.81883e+07 2.15874e+07 0.00187069 1.81253e+07 49.9132 0.00357755 0.99476 0 50.1895 GTEX-14PN4-0011-R10a-SM-AHZ72 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1024 ChIP-Seq GTEX-14PN4-0011-R10b-SM-69LP2 B1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 1024 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992803 945778 0.951698 0.994065 0.838159 23402 1 76 0.00198891 269 0 9.07294e+07 0.0479129 2.75811e+06 9.12711e+07 5.32724e+06 23417 4.52163e+07 0 0.11354 0.994065 0.833185 9.07294e+07 0.00273326 1.95984e+07 2.87566e+07 1.96356e+07 303 1.94976e+07 1.10075e+07 0.00236061 1.98499e+07 50.4476 0.0302189 0.995328 0 50.0474 GTEX-14PN4-0011-R10b-SM-CYKO4 B1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 1024 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 RIP-Seq GTEX-14PN4-0011-R11a-SM-686ZW B1, A1 8.8 Brain Brain - Cerebellar Hemisphere 0002037 1024 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992802 616901 0.948375 0.993545 0.7767 24271 1 76 0.00217064 273 0 1.13834e+08 0.0510984 1.32116e+06 1.14573e+08 6.07664e+06 24306 5.67053e+07 0 0.171674 0.993545 0.771686 1.13834e+08 0.00265265 2.45196e+07 1.8062e+07 2.46912e+07 322 2.46361e+07 1.60965e+07 0.00241146 2.46544e+07 50.0185 0.0115311 0.994287 0 50.1743 GTEX-14PN4-0011-R1b-SM-69LP8 B1, A1 6.1 Brain Brain - Hippocampus 0001954 1024 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991286 1.42476e+06 0.933052 0.992619 0.812505 23886 1 76 0.00214832 271 0 9.25062e+07 0.0666064 4.2242e+06 9.31941e+07 5.8718e+06 23910 4.61031e+07 0 0.120546 0.992619 0.806509 9.25062e+07 0.00298999 1.94695e+07 5.62562e+07 1.98735e+07 325 1.97182e+07 9.70467e+06 0.00256859 1.97535e+07 50.0446 0.0453269 0.993953 0 50.5135 GTEX-14PN4-0011-R2a-SM-6EU2Y B1, A1 7.1 Brain Brain - Substantia nigra 0002038 1024 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992061 506979 0.957754 0.993497 0.830425 23278 1 76 0.0043215 153 0 6.62701e+07 0.0419524 3.51727e+06 6.67039e+07 6.61083e+06 23297 3.29932e+07 0 0.127329 0.993497 0.825025 6.62701e+07 0.00444556 1.4529e+07 1.56007e+07 1.46176e+07 168 1.44793e+07 8.30536e+06 0.00438344 1.47647e+07 50.4879 0.0527296 0.994932 0 50.1519 GTEX-14PN4-0011-R3b-SM-686ZU B1, A1 9.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1024 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993478 795787 0.956174 0.994136 0.854579 23422 1 76 0.00205803 270 0 9.43603e+07 0.0433541 3.24504e+06 9.49169e+07 5.04531e+06 23438 4.70351e+07 0 0.101595 0.994136 0.849568 9.43603e+07 0.00257135 2.04934e+07 2.53882e+07 2.0558e+07 323 2.0478e+07 1.24435e+07 0.00231452 2.06413e+07 50.1986 0.0341882 0.994794 0 50.0787 GTEX-14PN4-0011-R4a-SM-686ZT B1, A1 6.9 Brain Brain - Amygdala 0001876 1024 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.977666 812918 0.947065 0.978492 0.83873 22637 1 76 0.0026158 200 0 7.34058e+07 0.0526153 4.41759e+06 7.50193e+07 3.99481e+06 22648 3.65304e+07 0 0.108336 0.978492 0.82069 7.34058e+07 0.00332376 1.58756e+07 2.88393e+07 1.59167e+07 240 1.5794e+07 8.07505e+06 0.00296948 1.60598e+07 50.4171 0.058886 0.979319 0 50.0647 GTEX-14PN4-0011-R5a-SM-686ZV B1, A1 6.5 Brain Brain - Caudate (basal ganglia) 0001873 1024 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992608 766837 0.954933 0.993319 0.838067 24156 1 76 0.00217615 270 0 1.03829e+08 0.0446574 3.90084e+06 1.04528e+08 5.86245e+06 24173 5.17477e+07 0 0.116866 0.993319 0.832468 1.03829e+08 0.00271547 2.23189e+07 3.00496e+07 2.25545e+07 330 2.24335e+07 1.30604e+07 0.00244562 2.25201e+07 50.0964 0.0373187 0.99403 0 50.2625 GTEX-14PN4-0011-R6b-SM-69LQU B1, A1 8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1024 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993402 1.18889e+06 0.942453 0.994612 0.806897 24476 1 76 0.00205872 268 0 9.16039e+07 0.0571346 3.44623e+06 9.21001e+07 5.0874e+06 24494 4.564e+07 0 0.135556 0.994612 0.80255 9.16039e+07 0.00284546 1.9641e+07 3.44977e+07 1.97352e+07 310 1.96362e+07 1.11142e+07 0.00245161 1.98464e+07 50.2662 0.0374183 0.995822 0 50.1196 GTEX-14PN4-0011-R7b-SM-69LQQ B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 1024 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992861 1.28655e+06 0.940523 0.994152 0.817456 23787 1 76 0.00201631 269 0 9.30371e+07 0.0591728 3.47535e+06 9.35844e+07 5.76988e+06 23805 4.63693e+07 0 0.123067 0.994152 0.812676 9.30371e+07 0.00280269 1.98314e+07 3.97644e+07 1.9956e+07 315 1.97949e+07 1.08142e+07 0.00240899 2.01191e+07 50.4062 0.037136 0.995442 0 50.1565 GTEX-14PN4-0011-R8a-SM-6EU1H B1, A1 7 Brain Brain - Hypothalamus 0001898 1024 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991227 545445 0.953736 0.99264 0.828468 23452 1 76 0.0043779 136 0 6.41732e+07 0.0458709 2.00021e+06 6.46491e+07 6.60824e+06 23468 3.19538e+07 0 0.125268 0.99264 0.822371 6.41732e+07 0.00431092 1.39557e+07 1.67749e+07 1.40682e+07 156 1.40044e+07 8.32333e+06 0.00434446 1.41137e+07 50.1943 0.0309395 0.994053 0 50.2007 GTEX-14PN4-0011-R9a-SM-6LLH9 B1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1024 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.97644 754871 0.956198 0.985209 0.813044 24904 1 76 0.00265459 383 0 1.05722e+08 0.0434898 3.10448e+06 1.07309e+08 8.81497e+06 24935 5.22532e+07 0 0.143154 0.985209 0.801018 1.05722e+08 0.00412527 2.30171e+07 2.26594e+07 2.3174e+07 337 2.33401e+07 1.34748e+07 0.00338339 2.3733e+07 50.4174 0.0289303 0.993978 0 50.1699 GTEX-14PN4-0126-SM-6EU2V 1 B1 6 pieces; 10 - 20% external/internal fat, epidermis 31um thick 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1045 1456 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991103 129665 0.979199 0.992427 0.833045 22102 1 76 0.00436321 172 0 7.43312e+07 0.0205189 276352 7.48984e+07 7.75116e+06 22124 3.70094e+07 0 0.146154 0.992427 0.826737 7.43312e+07 0.00442591 1.62701e+07 8.51192e+06 1.63062e+07 158 1.62671e+07 1.43185e+07 0.00439452 1.64093e+07 50.2176 0.00368969 0.993752 0 50.0554 GTEX-14PN4-0326-SM-6EU2N 0 B1 2 pieces; ~10% internal fat 7.7 Muscle Muscle - Skeletal 0011907 1052 1449 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.993174 110855 0.983759 0.994301 0.861315 19110 1 76 0.004088 167 0 6.86576e+07 0.016058 706474 6.90511e+07 6.15127e+06 19117 3.42193e+07 0 0.122444 0.994301 0.856406 6.86576e+07 0.0040035 1.51863e+07 9.41182e+06 1.52491e+07 171 1.51667e+07 1.12495e+07 0.0040458 1.53483e+07 50.2975 0.0102312 0.995428 0 50.1031 GTEX-14PN4-0326-SM-CYKOK 0 B1 2 pieces; ~10% internal fat 7.7 Muscle Muscle - Skeletal 0011907 1052 1449 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 RIP-Seq GTEX-14PN4-0426-SM-6AJ9N 0 B1 2 pieces; early atheromatous change, well trimmed 6.9 Blood Vessel Artery - Tibial 0007610 1051 1450 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990407 133466 0.971818 0.9931 0.799155 20695 1 76 0.00211741 137 0 6.19572e+07 0.0278898 287026 6.23877e+07 4.22636e+06 20712 3.0806e+07 0 0.172662 0.9931 0.793641 6.19572e+07 0.0034315 1.33483e+07 5.47867e+06 1.34499e+07 151 1.34223e+07 1.08377e+07 0.00277267 1.35344e+07 50.208 0.00460068 0.995792 0 50.1895 GTEX-14PN4-0626-SM-62LFP 1 B1 2 pieces (fragmented); 30 and 60% adipose tissue with dense fibrous stroma with scattered ductal structures 6.3 Breast Breast - Mammary Tissue 0008367 1064 1437 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.985308 187034 0.976194 0.989038 0.833345 22164 1 76 0.00276398 165 0 7.21928e+07 0.0235194 257024 7.2993e+07 5.22278e+06 22183 3.58529e+07 0 0.142849 0.989038 0.82421 7.21928e+07 0.00365184 1.57559e+07 1.07558e+07 1.5954e+07 161 1.59146e+07 1.59355e+07 0.00320624 1.60591e+07 50.226 0.00352122 0.992768 0 50.3125 GTEX-14PN4-0826-SM-69LON 1 B1 2 pieces; one is largely blood/clot 6.7 Heart Heart - Atrial Appendage 0006631 1096 1405 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993111 278280 0.97654 0.994348 0.827316 22139 1 76 0.00199577 269 0 9.1503e+07 0.0232518 1.14446e+06 9.20231e+07 5.77606e+06 22159 4.56125e+07 0 0.149224 0.994348 0.82264 9.1503e+07 0.00275844 1.91153e+07 1.09188e+07 1.91695e+07 272 1.91883e+07 1.59107e+07 0.00237663 1.91981e+07 50.0128 0.0124366 0.995585 0 50.0707 GTEX-14PN4-1426-SM-6LLJ4 1 B1 2 pieces; mature adipose tissue 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1111 1390 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.9768 204406 0.982359 0.985754 0.873237 22060 1 76 0.00239505 219 0 9.3099e+07 0.0172675 206098 9.44444e+07 8.32308e+06 22071 4.59954e+07 0 0.109121 0.985754 0.860797 9.3099e+07 0.0039794 2.03344e+07 1.04177e+07 2.02823e+07 243 2.05602e+07 2.05745e+07 0.00318003 2.08745e+07 50.3793 0.00218221 0.994708 0 49.9358 GTEX-14PN4-1526-SM-6871V 2 B1 2 pieces; nodular with interstitial fibrosis with some follicuar obliteration; ~5-10% external fat 6.7 Thyroid Thyroid 0002046 1115 1386 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.978651 188073 0.96695 0.979246 0.782433 23172 1 76 0.00223041 142 0 6.95683e+07 0.0327605 81654 7.10427e+07 3.82618e+06 23197 3.46415e+07 0 0.184517 0.979246 0.766195 6.95683e+07 0.00278665 1.51712e+07 8.43956e+06 1.52377e+07 158 1.51811e+07 1.21767e+07 0.00250836 1.527e+07 50.1459 0.00114937 0.979842 0 50.1093 GTEX-14PN4-1626-SM-6AJB5 1 B1 6 pieces; well preserved with ~5-10% internal fat and numerous islets 6.2 Pancreas Pancreas 0001150 1117 1384 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989498 441885 0.949012 0.992251 0.749925 21779 1 76 0.00235892 123 0 5.7914e+07 0.0507699 210709 5.83663e+07 3.98523e+06 21797 2.87961e+07 0 0.199086 0.992251 0.744114 5.7914e+07 0.00364416 1.26985e+07 1.70349e+07 1.28251e+07 123 1.28238e+07 1.08153e+07 0.00299976 1.28756e+07 50.1008 0.00361011 0.995005 0 50.248 GTEX-14PN4-2526-SM-686ZG 1 B1 2 pieces; well trimmed 7.3 Salivary Gland Minor Salivary Gland 0006330 1149 1352 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989881 268091 0.975423 0.990629 0.811525 24234 1 76 0.00230177 409 0 1.06903e+08 0.0237246 176866 1.07914e+08 6.10645e+06 24272 5.32401e+07 0 0.163898 0.990629 0.80392 1.06903e+08 0.00292947 2.42178e+07 2.57712e+07 2.4283e+07 341 2.42469e+07 1.92127e+07 0.00261538 2.43328e+07 50.0884 0.00163895 0.991376 0 50.0672 GTEX-14PN4-3026-SM-664O4 1 B1 2 pieces 6.8 Brain Brain - Cerebellum 0002037 1212 1289 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.990812 430797 0.943667 0.991503 0.713209 25046 1 76 0.002651 271 0 1.11053e+08 0.0559679 1.30443e+06 1.12005e+08 6.92263e+06 25092 5.52815e+07 0 0.230458 0.991503 0.707149 1.11053e+08 0.00333816 2.39174e+07 1.94842e+07 2.40857e+07 285 2.40368e+07 1.3935e+07 0.00299434 2.40365e+07 49.9997 0.0116462 0.992193 0 50.1753 GTEX-14PN4-3226-SM-6AJBO 2 B1 1 piece; adenohypophysis and portion of dura 5.8 Pituitary Pituitary 0000007 1221 1280 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99051 209262 0.969426 0.993073 0.790166 24200 1 76 0.00217692 144 0 6.43911e+07 0.0303193 261193 6.48403e+07 4.54181e+06 24221 3.20352e+07 0 0.17926 0.993073 0.784692 6.43911e+07 0.00335792 1.40514e+07 6.98559e+06 1.41723e+07 155 1.41634e+07 1.03117e+07 0.0027659 1.42191e+07 50.0982 0.00402825 0.995637 0 50.2143 GTEX-14PQA-0003-SM-6RBJN B1 Blood Whole Blood 0013756 1125 BP-48178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14PQA-0003-SM-7DLH4 B1 Blood Whole Blood 0013756 1125 BP-48178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14PQA-0006-SM-7PC2D B1 8.1 Blood Whole Blood 0013756 1125 BP-48196 RNA isolation_PAXgene Blood RNA (Manual) 01/10/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.982044 541400 0.973962 0.986972 0.769688 19396 1 76 0.00406019 140 0 8.7702e+07 0.0251138 633307 8.88597e+07 1.50614e+07 19410 4.34482e+07 0 0.204274 0.986972 0.75966 8.7702e+07 0.00568884 1.96518e+07 6.41386e+07 1.98624e+07 154 2.0006e+07 1.78934e+07 0.00487045 1.99374e+07 49.9142 0.00712705 0.991899 0 50.2665 GTEX-14PQA-0008-SM-E6CPD B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1164 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.987224 1.81994e+06 0.875621 0.989308 0.738151 20438 1 76 0.00194092 161 0 8.69817e+07 0.123698 701000 8.79217e+07 1.55361e+07 20447 4.32748e+07 0 0.137469 0.989308 0.730259 8.69817e+07 0.00282818 1.73773e+07 1.17606e+08 1.74932e+07 156 1.75182e+07 1.88976e+07 0.00238361 1.75404e+07 50.0317 0.007973 0.991392 0 50.1663 GTEX-14PQA-0011-R10a-SM-6AJAA B1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 1109 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991598 654524 0.953125 0.993711 0.812492 23502 1 76 0.00222184 199 0 7.77569e+07 0.0464826 4.01614e+06 7.8249e+07 5.74216e+06 23519 3.8716e+07 0 0.140634 0.993711 0.807382 7.77569e+07 0.00305005 1.67515e+07 2.53262e+07 1.69065e+07 255 1.686e+07 9.40844e+06 0.00263506 1.69628e+07 50.1519 0.0513251 0.995824 0 50.2302 GTEX-14PQA-0011-R10a-SM-AHZ74 B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1109 ChIP-Seq GTEX-14PQA-0011-R1b-SM-6EU1G B1, A1 7.5 Brain Brain - Hippocampus 0001954 1109 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992102 556535 0.958498 0.993411 0.82653 23431 1 76 0.00445943 201 0 7.97449e+07 0.0412199 7.03274e+06 8.02738e+07 7.6149e+06 23453 3.97234e+07 0 0.131968 0.993411 0.821084 7.97449e+07 0.00440001 1.75677e+07 2.24037e+07 1.76338e+07 254 1.75256e+07 8.2652e+06 0.00442976 1.7789e+07 50.3729 0.0876093 0.994719 0 50.0938 GTEX-14PQA-0011-R3b-SM-69LQO B1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1109 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992325 1.2529e+06 0.931706 0.993719 0.790442 22873 1 76 0.00220111 196 0 6.96792e+07 0.0680048 5.79298e+06 7.01196e+07 4.22674e+06 22888 3.47194e+07 0 0.141264 0.993719 0.785477 6.96792e+07 0.00299048 1.48242e+07 4.02252e+07 1.49853e+07 212 1.48297e+07 6.25062e+06 0.00259524 1.50866e+07 50.4293 0.0826157 0.995112 0 50.2701 GTEX-14PQA-0011-R4b-SM-6AJBU B1, A1 7.1 Brain Brain - Amygdala 0001876 1109 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989728 1.10633e+06 0.945136 0.992055 0.806777 22538 1 76 0.00243982 267 0 8.19368e+07 0.0546049 7.82187e+06 8.2593e+07 6.1165e+06 22552 4.07947e+07 0 0.138358 0.992055 0.800368 8.19368e+07 0.00340602 1.74123e+07 4.94523e+07 1.76773e+07 297 1.74929e+07 6.98483e+06 0.00292179 1.77943e+07 50.427 0.0947038 0.994382 0 50.3775 GTEX-14PQA-0011-R5b-SM-6AJC2 B1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 1109 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991674 761798 0.947026 0.993847 0.792742 23927 1 76 0.00233976 199 0 7.2921e+07 0.0527231 4.47977e+06 7.33725e+07 5.24288e+06 23945 3.63088e+07 0 0.154284 0.993847 0.787865 7.2921e+07 0.00319714 1.55905e+07 3.09659e+07 1.57699e+07 223 1.56741e+07 7.40691e+06 0.00276751 1.58465e+07 50.2734 0.0610552 0.99602 0 50.286 GTEX-14PQA-0011-R6b-SM-6AJAM B1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1109 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.98976 696993 0.943556 0.992316 0.78844 23680 1 76 0.00247669 197 0 7.20062e+07 0.0562581 5.54002e+06 7.25638e+07 5.23848e+06 23701 3.58273e+07 0 0.155116 0.992316 0.782381 7.20062e+07 0.00362927 1.5289e+07 2.61282e+07 1.56359e+07 216 1.54698e+07 5.74829e+06 0.0030515 1.56351e+07 50.2656 0.0763469 0.994871 0 50.5608 GTEX-14PQA-0011-R8b-SM-6AJAB B1, A1 6.9 Brain Brain - Hypothalamus 0001898 1109 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990526 532756 0.955976 0.992934 0.810237 23848 1 76 0.00240666 201 0 7.36292e+07 0.0437778 5.45073e+06 7.41531e+07 5.03652e+06 23864 3.66491e+07 0 0.145739 0.992934 0.804513 7.36292e+07 0.00349827 1.59285e+07 2.66587e+07 1.619e+07 234 1.60223e+07 7.26147e+06 0.00295114 1.62667e+07 50.3783 0.0735064 0.995343 0 50.4072 GTEX-14PQA-0526-SM-7KUFS 1 B1 2 pieces 7.2 Muscle Muscle - Skeletal 0011907 1177 832 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.978107 312289 0.982262 0.986813 0.871424 20534 1 76 0.00358719 222 0 8.43485e+07 0.0175207 854221 8.54757e+07 7.36582e+06 20547 4.1684e+07 0 0.110837 0.986813 0.859933 8.43485e+07 0.00443844 1.86602e+07 9.65395e+06 1.87378e+07 213 1.90548e+07 1.6357e+07 0.00400906 1.90237e+07 49.9592 0.00999373 0.995519 0 50.1038 GTEX-14PQA-0526-SM-CYKUF 1 B1 2 pieces 7.2 Muscle Muscle - Skeletal 0011907 1177 832 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 RIP-Seq GTEX-14PQA-1126-SM-7KUM4 2 B1 2 pieces; patchy pneumonia and congestion 6.5 Lung Lung 0008952 1223 786 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.988349 341000 0.968949 0.990222 0.758807 24033 1 76 0.00404145 155 0 8.14583e+07 0.0307063 587608 8.22626e+07 6.68209e+06 24059 4.04873e+07 0 0.210143 0.990222 0.751387 8.14583e+07 0.00483155 1.77405e+07 1.43116e+07 1.79676e+07 171 1.79765e+07 1.32415e+07 0.00443575 1.78921e+07 49.8824 0.00714308 0.992096 0 50.318 GTEX-14PQA-1126-SM-CYKTQ 2 B1 2 pieces; patchy pneumonia and congestion 6.5 Lung Lung 0008952 1223 786 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 RIP-Seq GTEX-14PQA-1226-SM-6M47A 3 B1 2 pieces; multinodular with some fibrosis, one piece includes portion of fat/fibrous tissue 6.2 Thyroid Thyroid 0002046 1226 783 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992475 121418 0.964415 0.994147 0.806564 22554 1 76 0.0024862 130 0 5.54384e+07 0.0352571 501030 5.57648e+07 7.55556e+06 22573 2.76202e+07 0 0.157851 0.994147 0.801843 5.54384e+07 0.00363541 1.20644e+07 8.16058e+06 1.2105e+07 131 1.2086e+07 9.85363e+06 0.00305984 1.21775e+07 50.1884 0.00898471 0.995819 0 50.0838 GTEX-14PQA-3126-SM-6LPKD 1 B1 1 piece; predominantly adenohypophysis with sparse neurohypophysis component 6 Pituitary Pituitary 0000007 1387 622 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.987854 218579 0.962679 0.989997 0.83434 22627 1 76 0.00250314 125 0 5.95241e+07 0.0370196 708337 6.01255e+07 9.85067e+06 22644 2.96409e+07 0 0.128338 0.989997 0.825994 5.95241e+07 0.00354587 1.23819e+07 1.78989e+07 1.24131e+07 136 1.23887e+07 1.14173e+07 0.00302338 1.25308e+07 50.2851 0.011781 0.992139 0 50.063 GTEX-14XAO-0003-SM-6RBJA B1 Blood Whole Blood 0013756 -81 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-14XAO-0003-SM-7DLF1 B1 Blood Whole Blood 0013756 -81 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-14XAO-0006-SM-7RHFX B1 9.6 Blood Whole Blood 0013756 -81 BP-48259 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992382 471457 0.971738 0.994465 0.864244 19406 1 76 0.00275607 277 0 1.20067e+08 0.027765 739906 1.20735e+08 1.14204e+07 19419 5.97843e+07 0 0.107495 0.994465 0.85946 1.20067e+08 0.00419289 2.65192e+07 2.95574e+07 2.67387e+07 327 2.67634e+07 2.4756e+07 0.00347297 2.67390e+07 49.9773 0.00612834 0.996547 0 50.206 GTEX-14XAO-0008-SM-E9U4M B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 265 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990965 1.03386e+06 0.919951 0.992196 0.775978 21073 1 76 0.00147274 177 0 9.06646e+07 0.0795921 427634 9.13777e+07 3.17135e+06 21090 4.5174e+07 0 0.143972 0.992196 0.769923 9.06646e+07 0.00228946 1.88194e+07 6.51911e+07 1.94753e+07 174 1.94778e+07 2.13489e+07 0.00188059 1.89303e+07 49.2873 0.00467985 0.993428 0 50.8564 GTEX-14XAO-0226-SM-68728 1 B1 2 pieces, no significant steatosis or hepatitis 6.7 Liver Liver 0001114 94 741 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.993456 575579 0.971905 0.994103 0.846801 21247 1 76 0.0019399 269 0 1.05292e+08 0.0274546 694833 1.05917e+08 5.55393e+06 21262 5.2491e+07 0 0.125105 0.994103 0.841807 1.05292e+08 0.00236415 2.28995e+07 2.97071e+07 2.30474e+07 307 2.28779e+07 1.94972e+07 0.00215189 2.31365e+07 50.281 0.00656017 0.994749 0 50.161 GTEX-14XAO-0326-SM-6ETZN 1 B1 2 pieces, ~40% adherent/interstitial fat, rep delineated; patchy congestion/hemorrhage 9.2 Adrenal Gland Adrenal Gland 0002369 96 739 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991992 207642 0.978236 0.993401 0.834137 22567 1 76 0.00422796 158 0 8.20343e+07 0.0214344 1.20565e+06 8.25792e+07 7.86638e+06 22587 4.08699e+07 0 0.144099 0.993401 0.828633 8.20343e+07 0.00421176 1.81866e+07 1.08116e+07 1.81780e+07 197 1.8098e+07 1.45502e+07 0.00421987 1.83895e+07 50.3994 0.0145999 0.99481 0 49.9882 GTEX-14XAO-0426-SM-6AJB6 1 B1 2 pieces, no abnormalities 9.1 Thyroid Thyroid 0002046 98 737 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991777 213094 0.975393 0.994102 0.805717 22697 1 76 0.0019877 140 0 6.82218e+07 0.0243046 202794 6.86266e+07 4.58911e+06 22715 3.39681e+07 0 0.169676 0.994102 0.800965 6.82218e+07 0.00297215 1.50505e+07 5.97763e+06 1.51616e+07 149 1.51595e+07 1.35307e+07 0.00247878 1.51985e+07 50.0642 0.00295504 0.996426 0 50.184 GTEX-14XAO-0526-SM-6AJB7 1 B1 2 pieces, mild congestion, foci of well-preserved bronchial mucosa delineated 9 Lung Lung 0008952 101 734 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99185 194391 0.973863 0.993959 0.810925 24453 1 76 0.00207554 210 0 8.3953e+07 0.0257672 349762 8.44632e+07 6.24415e+06 24486 4.18083e+07 0 0.162939 0.993959 0.806026 8.3953e+07 0.00285614 1.84694e+07 7.92003e+06 1.86906e+07 209 1.86514e+07 1.63988e+07 0.00246501 1.86732e+07 50.0292 0.004141 0.996069 0 50.2976 GTEX-14XAO-0926-SM-69LPZ 1 B1 2 pieces, no abnormalities 9.4 Heart Heart - Atrial Appendage 0006631 114 721 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.994549 183196 0.981806 0.995802 0.858614 20977 1 76 0.00187529 199 0 7.72017e+07 0.0178716 882048 7.75271e+07 5.07794e+06 20987 3.84909e+07 0 0.123192 0.995802 0.85501 7.72017e+07 0.00262897 1.6588e+07 1.10666e+07 1.66774e+07 224 1.65694e+07 1.40079e+07 0.00225166 1.67854e+07 50.3238 0.0113773 0.997056 0 50.1343 GTEX-14XAO-1026-SM-6LLJ7 1 B1 2 pieces, ~70% occlusive atherosis, delineated, focally calcified (rep encircled) 8.5 Blood Vessel Artery - Coronary 0001621 118 717 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978012 186064 0.97679 0.98688 0.860888 22263 1 76 0.00226239 168 0 8.25983e+07 0.0229101 276992 8.36964e+07 6.6014e+06 22283 4.08339e+07 0 0.115903 0.98688 0.849593 8.25983e+07 0.00371937 1.78591e+07 7.20928e+06 1.78797e+07 196 1.80903e+07 1.76653e+07 0.00298433 1.8344e+07 50.3481 0.00330948 0.995748 0 50.0288 GTEX-14XAO-1126-SM-6EU11 1 B1 2 pieces, subacute myocardial infarct, (~24-48 hours old), ~1 cm, ensquared 8.8 Heart Heart - Left Ventricle 0006566 122 713 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991905 203511 0.983375 0.993262 0.882806 20773 1 76 0.00409333 203 0 8.72538e+07 0.0163257 1.51005e+06 8.78457e+07 8.98928e+06 20781 4.34832e+07 0 0.100569 0.993262 0.876857 8.72538e+07 0.00401467 1.94655e+07 8.3238e+06 1.95197e+07 235 1.94859e+07 1.84152e+07 0.00405405 1.96173e+07 50.168 0.0171898 0.994618 0 50.0695 GTEX-14XAO-1226-SM-6EU1C 0 B1 6 pieces, minimal dermal fat, sqaumous epithelium is ~60 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 125 710 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991735 104895 0.975437 0.99298 0.817197 21640 1 76 0.00417955 128 0 6.28902e+07 0.0243742 294142 6.33348e+07 6.13953e+06 21657 3.13359e+07 0 0.15824 0.99298 0.81146 6.28902e+07 0.00417523 1.40559e+07 7.44006e+06 1.41156e+07 134 1.40723e+07 1.16826e+07 0.00417739 1.41775e+07 50.1861 0.00464424 0.994225 0 50.1059 GTEX-14XAO-1326-SM-6EU1A 1 B1 6 pieces, confirmed target muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 128 707 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992896 117726 0.980754 0.994181 0.880329 20572 1 76 0.00405394 138 0 6.43211e+07 0.0189864 455653 6.46976e+07 6.13592e+06 20582 3.20516e+07 0 0.100425 0.994181 0.875207 6.43211e+07 0.00403472 1.4055e+07 5.5811e+06 1.41679e+07 146 1.40898e+07 1.29503e+07 0.00404434 1.42158e+07 50.2227 0.00704281 0.995466 0 50.2 GTEX-14XAO-1426-SM-6EU2C 1 B1 6 pieces, confirmed target muscularis 8.3 Esophagus Esophagus - Muscularis 0004648 131 704 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.99142 122567 0.978922 0.992944 0.872222 20628 1 76 0.0040763 130 0 6.25727e+07 0.0208378 583234 6.30174e+07 6.09527e+06 20636 3.1164e+07 0 0.1067 0.992944 0.866067 6.25727e+07 0.00419364 1.35616e+07 5.8063e+06 1.36688e+07 142 1.35861e+07 1.2132e+07 0.00413488 1.37361e+07 50.2746 0.00925513 0.994467 0 50.1968 GTEX-14XAO-1926-SM-6ETZO 1 B1 6 pieces, well-preserved, ~40% target lymphoid aggregates 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 152 683 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991119 128334 0.974341 0.992499 0.829412 23800 1 76 0.00442777 142 0 7.39356e+07 0.0250671 548282 7.44943e+07 7.58667e+06 23819 3.68164e+07 0 0.144929 0.992499 0.823191 7.39356e+07 0.00447625 1.64659e+07 7.94599e+06 1.66048e+07 158 1.65555e+07 1.34945e+07 0.00445197 1.66146e+07 50.0891 0.00736005 0.993879 0 50.2101 GTEX-14XAO-2026-SM-69LOI 1 B1 6 pieces, up to ~0.5mm, ~30% thickness 8.3 Colon Colon - Transverse 0001157 155 680 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99267 178140 0.977623 0.993879 0.841034 22370 1 76 0.00220982 306 0 8.67729e+07 0.0215404 1.52658e+06 8.73073e+07 5.46724e+06 22391 4.3228e+07 0 0.13659 0.993879 0.835885 8.67729e+07 0.0029956 1.93433e+07 1.30448e+07 1.9429e+07 282 1.92749e+07 1.41915e+07 0.00260224 1.95901e+07 50.4055 0.0174851 0.995088 0 50.1105 GTEX-14XAO-2226-SM-6LLHU 0 B1 2 pieces, atrophic appearing fibers, interstitial fat/vascular elements are ~30-40 % 7.3 Muscle Muscle - Skeletal 0011907 263 572 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979738 188643 0.980816 0.98798 0.877479 20308 1 76 0.00249238 211 0 8.37376e+07 0.0190254 764206 8.47564e+07 7.62818e+06 20315 4.14525e+07 0 0.103337 0.98798 0.866931 8.37376e+07 0.00394572 1.83713e+07 1.04385e+07 1.84308e+07 245 1.87125e+07 1.56103e+07 0.00321299 1.87417e+07 50.0391 0.0090165 0.996222 0 50.0808 GTEX-14XAO-2326-SM-6EU1B 0 B1 6 pieces, trace adherent dermal fat, squamous epithelium is ~40 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 265 570 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.99187 136854 0.97528 0.99331 0.807623 22458 1 76 0.00423094 158 0 6.68817e+07 0.0245092 529498 6.73322e+07 6.84293e+06 22481 3.33129e+07 0 0.167657 0.99331 0.802219 6.68817e+07 0.00431347 1.48641e+07 7.37337e+06 1.48797e+07 142 1.48545e+07 1.24461e+07 0.00427214 1.49852e+07 50.219 0.00786397 0.99475 0 50.0262 GTEX-14XAO-5004-SM-AN43Q B1 Heart Heart - Left Ventricle 0006566 114 ChIP-Seq GTEX-14XAO-5016-SM-AN43S B1 Muscle Muscle - Skeletal 0011907 263 ChIP-Seq GTEX-15CHC-0001-SM-6RBJF B1 Blood Whole Blood 0013756 -24 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15CHC-0001-SM-7DLH1 B1 Blood Whole Blood 0013756 -24 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-6363 01/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15CHC-0006-SM-7P8RG B1 8.7 Blood Whole Blood 0013756 -24 BP-48259 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.92109 544213 0.963598 0.954109 0.811699 20252 1 76 0.00448225 134 0 8.74031e+07 0.0351186 345174 9.16071e+07 1.24306e+07 20260 4.20261e+07 0 0.151899 0.954109 0.774449 8.74031e+07 0.0104559 1.90685e+07 7.9852e+07 1.88321e+07 146 2.04673e+07 1.93733e+07 0.0073657 2.04174e+07 49.939 0.00376799 0.987128 0 49.6882 GTEX-15CHC-0008-SM-E9U4J B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 273 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986481 2.07668e+06 0.850502 0.987625 0.70513 19287 1 76 0.00131803 162 0 9.04165e+07 0.148552 471883 9.15495e+07 2.99526e+06 19301 4.50551e+07 0 0.145372 0.987625 0.696404 9.04165e+07 0.00212688 1.7225e+07 1.42024e+08 1.82895e+07 159 1.83109e+07 1.9813e+07 0.00172199 1.73316e+07 48.6262 0.0051544 0.988768 0 51.4986 GTEX-15CHC-0126-SM-5YYBA 1 B1 2 pieces; 10% external fibrofatty tissue 5.7 Thyroid Thyroid 0002046 187 831 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.991621 208534 0.965532 0.992861 0.727526 24993 1 76 0.00255147 272 0 1.05308e+08 0.0342299 799304 1.06065e+08 4.6951e+06 25050 5.24207e+07 0 0.238007 0.992861 0.722331 1.05308e+08 0.00321808 2.30857e+07 1.10776e+07 2.31537e+07 314 2.30721e+07 1.39998e+07 0.00288436 2.3288e+07 50.2328 0.00753596 0.9941 0 50.0735 GTEX-15CHC-0226-SM-5YYBB 1 B1 2 pieces; bronchiectasis, emphysema, fibrosis, bronchitis 6.3 Lung Lung 0008952 193 825 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990135 118183 0.968378 0.991443 0.756554 24977 1 76 0.00314435 135 0 7.33356e+07 0.0303516 452630 7.39686e+07 3.32716e+06 25012 3.64677e+07 0 0.211825 0.991443 0.750079 7.33356e+07 0.00382669 1.62388e+07 8.72332e+06 1.63402e+07 164 1.63219e+07 1.08297e+07 0.00348507 1.63517e+07 50.0457 0.00611922 0.99275 0 50.1556 GTEX-15CHC-0326-SM-5ZZVP 1 B1 2 pieces; 5 & 10% internal fat content 7.3 Heart Heart - Atrial Appendage 0006631 194 824 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994539 173947 0.979795 0.995699 0.835585 22300 1 76 0.00170553 267 0 8.60635e+07 0.0199066 1.96635e+06 8.64352e+07 8.43881e+06 22316 4.29155e+07 0 0.14421 0.995699 0.831992 8.60635e+07 0.00270431 1.87403e+07 1.59308e+07 1.8871e+07 271 1.86834e+07 1.31357e+07 0.00220433 1.90145e+07 50.4391 0.0227494 0.99686 0 50.1738 GTEX-15CHC-0426-SM-6LLHI 1 B1 2 pieces; no infarct 8.7 Heart Heart - Left Ventricle 0006566 196 822 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.981693 167721 0.983864 0.988784 0.859771 20931 1 76 0.00204879 266 0 8.77233e+07 0.0158452 2.08891e+06 8.87184e+07 7.45307e+06 20949 4.34704e+07 0 0.124093 0.988784 0.850128 8.77233e+07 0.00325551 1.92214e+07 1.47776e+07 1.91728e+07 274 1.92879e+07 1.53999e+07 0.00264782 1.96653e+07 50.4844 0.0235454 0.995875 0 49.9366 GTEX-15CHC-0526-SM-6EU23 1 B1 2 pieces; prominent sclerotic, partly calcified plaque; 1 piece has 50% adjacent myocardium and fibrofatty tissue [labeled] 6.8 Blood Vessel Artery - Coronary 0001621 201 817 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989783 172434 0.972288 0.99125 0.814118 22870 1 76 0.00411989 155 0 7.61431e+07 0.0274117 515319 7.68152e+07 7.80415e+06 22894 3.78896e+07 0 0.15817 0.99125 0.806995 7.61431e+07 0.00425062 1.65089e+07 6.23677e+06 1.65793e+07 168 1.64996e+07 1.31521e+07 0.00418515 1.67007e+07 50.3029 0.00670855 0.992717 0 50.1064 GTEX-15CHC-0626-SM-686YV 1 B1 6 pieces; up to 1 mm adventitial fat 7.3 Blood Vessel Artery - Aorta 0001496 203 815 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.985022 193418 0.972681 0.985716 0.81435 22500 1 76 0.00205752 205 0 8.33145e+07 0.0268853 258276 8.45218e+07 4.39442e+06 22521 4.1495e+07 0 0.158331 0.985716 0.802718 8.33145e+07 0.00265118 1.79155e+07 7.33519e+06 1.81027e+07 207 1.80099e+07 1.53467e+07 0.00235414 1.80726e+07 50.0868 0.00305573 0.986411 0 50.2598 GTEX-15CHC-0726-SM-6AJ9D 1 B1 2 pieces; contains 0.2 mm capsule on both pieces 6.8 Spleen Spleen 0002106 204 814 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.983471 306730 0.955701 0.986032 0.751851 23904 1 76 0.00389349 148 0 7.80086e+07 0.039009 530938 7.91136e+07 5.27161e+06 23936 3.85786e+07 0 0.20385 0.986032 0.741349 7.80086e+07 0.00506126 1.71956e+07 2.43637e+07 1.72609e+07 174 1.72967e+07 1.01533e+07 0.00447586 1.73554e+07 50.0847 0.00671108 0.988592 0 50.0947 GTEX-15CHC-0826-SM-686YW 1 B1 2 pieces; minimal fibrovascular stroma 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 210 808 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988513 224861 0.975665 0.989255 0.831824 22072 1 76 0.00204206 202 0 7.6396e+07 0.0240423 793177 7.72258e+07 4.2384e+06 22093 3.80438e+07 0 0.143841 0.989255 0.822886 7.6396e+07 0.00264525 1.6903e+07 8.49386e+06 1.69285e+07 215 1.68217e+07 1.22129e+07 0.00234343 1.7068e+07 50.3633 0.0102709 0.989996 0 50.0378 GTEX-15CHC-1126-SM-6LLHQ 1 B1 6 pieces; well trimmed; 5-20% dermal fat 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 218 800 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976804 210624 0.96849 0.985799 0.780594 24632 1 76 0.00241255 228 0 9.23443e+07 0.0312859 446876 9.36746e+07 8.08557e+06 24664 4.56267e+07 0 0.187896 0.985799 0.769508 9.23443e+07 0.00393325 2.00867e+07 9.33168e+06 1.99948e+07 234 2.02811e+07 1.52883e+07 0.00316596 2.06095e+07 50.4016 0.00477051 0.994793 0 49.8853 GTEX-15CHC-1226-SM-686ZH 1 B1 2 pieces; well dissected glands; moderate ductal dilatation, atrophy and fibrosis 7.6 Salivary Gland Minor Salivary Gland 0006330 221 797 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.991442 179488 0.971168 0.991986 0.778563 25009 1 76 0.00225206 278 0 9.21231e+07 0.0278932 417375 9.28674e+07 4.98735e+06 25047 4.58761e+07 0 0.192605 0.991986 0.772323 9.21231e+07 0.00272273 2.05143e+07 1.01684e+07 2.05879e+07 265 2.05275e+07 1.55828e+07 0.00248727 2.06235e+07 50.1167 0.00449431 0.992529 0 50.0895 GTEX-15CHC-1326-SM-6LLJA 1 B1 6 pieces with up to 30% submucosal fibrovascular stroma 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 238 780 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978727 184454 0.972162 0.986887 0.803142 23729 1 76 0.00238193 212 0 8.65258e+07 0.0275216 359849 8.76754e+07 7.52998e+06 23757 4.27953e+07 0 0.16902 0.986887 0.79261 8.65258e+07 0.00379512 1.88684e+07 6.90528e+06 1.88242e+07 219 1.90599e+07 1.52666e+07 0.00308268 1.93104e+07 50.3265 0.00410433 0.995047 0 49.9415 GTEX-15CHC-1426-SM-5ZZVQ 1 B1 6 pieces with up to 40% submucosal fibrovascular stroma 6.3 Esophagus Esophagus - Muscularis 0004648 240 778 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993522 240329 0.974891 0.995231 0.823083 22531 1 76 0.00187787 158 0 6.7681e+07 0.0248425 619527 6.80053e+07 5.69952e+06 22551 3.37044e+07 0 0.151808 0.995231 0.819158 6.7681e+07 0.00309726 1.46879e+07 5.35828e+06 1.47435e+07 167 1.46788e+07 1.14572e+07 0.00248652 1.48626e+07 50.311 0.00910998 0.99694 0 50.0944 GTEX-15CHC-1626-SM-5ZZWS 1 B1 6 pieces: 2 without mucosa 6.9 Colon Colon - Transverse 0001157 247 771 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993961 181890 0.970988 0.994968 0.830411 21584 1 76 0.00183377 141 0 5.92219e+07 0.0287013 446551 5.95214e+07 5.42425e+06 21595 2.95285e+07 0 0.140578 0.994968 0.826232 5.92219e+07 0.00280488 1.27843e+07 7.61268e+06 1.28583e+07 141 1.28177e+07 1.09093e+07 0.00231883 1.28843e+07 50.1296 0.00750236 0.995975 0 50.1444 GTEX-15CHC-2026-SM-6EU1Z 1 B1 2 pieces; all myometrium, no endometrium in this cut 6.1 Uterus Uterus 0000995 252 766 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990706 112652 0.969097 0.991976 0.765951 22451 1 76 0.00418195 127 0 6.70623e+07 0.0306557 430711 6.76048e+07 6.69548e+06 22473 3.33712e+07 0 0.203145 0.991976 0.759805 6.70623e+07 0.00420304 1.45104e+07 5.49431e+06 1.45819e+07 144 1.44836e+07 1.00131e+07 0.00419248 1.46918e+07 50.3567 0.00637101 0.993246 0 50.1228 GTEX-15CHC-2126-SM-6EU21 1 B1 6 pieces; dermal elastosis; 50% dermal fat 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 273 745 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989376 211089 0.967931 0.991306 0.756667 24439 1 76 0.00415486 162 0 7.92102e+07 0.0318764 403211 7.99049e+07 7.55798e+06 24472 3.94111e+07 0 0.211265 0.991306 0.750089 7.92102e+07 0.00440972 1.74561e+07 7.81851e+06 1.7452e+07 168 1.74166e+07 1.18327e+07 0.00428204 1.76401e+07 50.3189 0.00504614 0.993237 0 49.9941 GTEX-15CHC-2426-SM-6EU22 1 B1 2 pieces; foci of tendon in each piece up to 2.5 mm [marked] at edge 7.7 Muscle Muscle - Skeletal 0011907 288 730 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992201 225375 0.978463 0.993688 0.864756 19370 1 76 0.00374157 158 0 7.30602e+07 0.0213538 1.3701e+06 7.35242e+07 7.02666e+06 19379 3.63964e+07 0 0.113707 0.993688 0.859298 7.30602e+07 0.0038192 1.59759e+07 1.07883e+07 1.60709e+07 182 1.59392e+07 1.27528e+07 0.00378033 1.62151e+07 50.4289 0.0186347 0.995176 0 50.1481 GTEX-15CHC-2526-SM-686YX 1 B1 2 pieces; 10 & 50% internal fibrofatty tissue 6 Nerve Nerve - Tibial 0001323 290 728 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.987269 235794 0.95821 0.987896 0.69807 24126 1 76 0.00232967 162 0 7.11257e+07 0.0415517 274695 7.19971e+07 3.72139e+06 24171 3.53892e+07 0 0.26014 0.987896 0.68962 7.11257e+07 0.00294129 1.55836e+07 8.73459e+06 1.56118e+07 157 1.5531e+07 9.75832e+06 0.00263528 1.57083e+07 50.2838 0.00381536 0.988522 0 50.0452 GTEX-15CHC-5004-SM-AN437 B1 Heart Heart - Left Ventricle 0006566 196 ChIP-Seq GTEX-15CHC-5019-SM-AN438 B1 Muscle Muscle - Skeletal 0011907 293 ChIP-Seq GTEX-15CHQ-0002-SM-6RBKS C1 Blood Whole Blood 0013756 796 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15CHQ-0002-SM-7DLEY C1 Blood Whole Blood 0013756 796 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15CHQ-0005-SM-7P8RH C1 8.7 Blood Whole Blood 0013756 796 BP-48259 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.902288 902510 0.953469 0.934598 0.75933 18638 1 76 0.00418957 78 0 7.62124e+07 0.0445445 93594 8.15456e+07 1.17901e+07 18643 3.66272e+07 0 0.194139 0.934598 0.709669 7.62124e+07 0.0106031 1.71821e+07 1.37563e+08 1.67385e+07 102 1.82203e+07 1.88557e+07 0.00728547 1.83823e+07 50.2213 0.00114775 0.966908 0 49.3462 GTEX-15CHQ-0008-SM-E9U4I C1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 851 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986972 1.9805e+06 0.864558 0.988002 0.692655 21442 1 76 0.00147183 187 0 1.03309e+08 0.13466 462270 1.04564e+08 3.63168e+06 21463 5.14891e+07 0 0.171904 0.988002 0.684344 1.03309e+08 0.00219518 2.00016e+07 1.3911e+08 2.11711e+07 188 2.11727e+07 2.14123e+07 0.00183312 2.01296e+07 48.7372 0.00442094 0.989031 0 51.4203 GTEX-15CHQ-0011-R10a-SM-AHZN1 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 800 ChIP-Seq GTEX-15CHQ-0011-R10b-SM-6AJBV C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 800 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991825 885013 0.943683 0.993936 0.800419 24050 1 76 0.00207299 201 0 7.64281e+07 0.0557538 1.42428e+06 7.68943e+07 4.96911e+06 24068 3.80391e+07 0 0.143264 0.993936 0.795566 7.64281e+07 0.00292699 1.641e+07 2.35696e+07 1.64886e+07 214 1.64775e+07 1.05684e+07 0.00249909 1.65866e+07 50.165 0.0185225 0.996047 0 50.1195 GTEX-15CHQ-0011-R11b-SM-686ZZ C1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 800 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992094 755331 0.947956 0.992812 0.780679 24977 1 76 0.00217235 275 0 1.19877e+08 0.0516309 1.2463e+06 1.20744e+08 6.76114e+06 25016 5.97204e+07 0 0.167277 0.992812 0.775068 1.19877e+08 0.00265891 2.58369e+07 1.90288e+07 2.59625e+07 329 2.59114e+07 1.66186e+07 0.00241545 2.59766e+07 50.0628 0.0103218 0.993531 0 50.1213 GTEX-15CHQ-0011-R1a-SM-6AJAH C1, A1 7.2 Brain Brain - Hippocampus 0001954 800 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.99096 937078 0.932063 0.993416 0.786887 23290 1 76 0.00235627 158 0 6.60108e+07 0.0677084 4.05711e+06 6.64483e+07 4.75610e+06 23307 3.28557e+07 0 0.145175 0.993416 0.781706 6.60108e+07 0.00345176 1.39695e+07 3.50215e+07 1.41763e+07 187 1.41222e+07 6.07754e+06 0.00290266 1.41937e+07 50.1262 0.0610566 0.995872 0 50.3674 GTEX-15CHQ-0011-R1a-SM-6EU31 C1, A1 8 Brain Brain - Hippocampus 0001954 800 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991969 557108 0.948633 0.993252 0.784694 24334 1 76 0.00426202 132 0 6.84598e+07 0.0510288 2.0501e+06 6.89248e+07 6.78956e+06 24365 3.40823e+07 0 0.16394 0.993252 0.779399 6.84598e+07 0.00428868 1.49297e+07 1.64493e+07 1.49464e+07 163 1.48763e+07 8.06919e+06 0.00427533 1.50864e+07 50.3506 0.0297439 0.994536 0 50.0279 GTEX-15CHQ-0011-R1a-SM-COH27 C1, A1 7.2 Brain Brain - Hippocampus 0001954 800 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992238 1.08162e+06 0.937553 0.993528 0.80092 24831 1 76 0.00383515 270 0 8.99423e+07 0.0621965 5.96488e+06 9.05282e+07 9.68448e+06 24858 4.48181e+07 0 0.136633 0.993528 0.795737 8.99423e+07 0.00430098 1.91417e+07 3.82862e+07 1.96031e+07 304 1.95498e+07 8.73641e+06 0.00406776 1.93192e+07 49.7033 0.0658897 0.994818 0 50.5954 GTEX-15CHQ-0011-R2b-SM-6AJAD C1, A1 7.7 Brain Brain - Substantia nigra 0002038 800 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991843 583100 0.957128 0.994173 0.81964 23935 1 76 0.00213916 206 0 7.47442e+07 0.0424831 2.15392e+06 7.51823e+07 5.24667e+06 23959 3.72087e+07 0 0.137488 0.994173 0.814864 7.47442e+07 0.00316955 1.63239e+07 1.77356e+07 1.6458e+07 222 1.64164e+07 1.04095e+07 0.00265315 1.65336e+07 50.1779 0.0286494 0.996502 0 50.2046 GTEX-15CHQ-0011-R3b-SM-686ZY C1, A1 8.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 800 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.990294 404819 0.960646 0.990995 0.849622 23830 1 76 0.0021292 270 0 8.07847e+07 0.0388759 2.01905e+06 8.15188e+07 4.29324e+06 23851 4.0232e+07 0 0.111025 0.990995 0.841971 8.07847e+07 0.00271101 1.7693e+07 1.20835e+07 1.78054e+07 277 1.77134e+07 1.11974e+07 0.0024199 1.78418e+07 50.1805 0.0247679 0.991697 0 50.1583 GTEX-15CHQ-0011-R4a-SM-686ZX C1, A1 7.7 Brain Brain - Amygdala 0001876 800 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986958 808687 0.94757 0.987793 0.819174 24089 1 76 0.00243193 269 0 8.24988e+07 0.0521468 3.9744e+06 8.35184e+07 4.71951e+06 24107 4.10719e+07 0 0.128396 0.987793 0.809174 8.24988e+07 0.00305141 1.77951e+07 2.74309e+07 1.79788e+07 304 1.78529e+07 8.68748e+06 0.00274141 1.80001e+07 50.2053 0.0475872 0.988627 0 50.2568 GTEX-15CHQ-0011-R5b-SM-6AJAN C1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 800 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991457 845117 0.940306 0.99375 0.806676 23621 1 76 0.00211395 148 0 6.38773e+07 0.0592556 1.28342e+06 6.4279e+07 4.35148e+06 23639 3.17914e+07 0 0.13363 0.99375 0.801634 6.38773e+07 0.00308199 1.36544e+07 2.10174e+07 1.37136e+07 166 1.37095e+07 8.69616e+06 0.00259686 1.38193e+07 50.1995 0.0199665 0.996042 0 50.1082 GTEX-15CHQ-0011-R6b-SM-69LOX C1, A1 8.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 800 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993068 884449 0.94514 0.994269 0.803337 24612 1 76 0.00204886 270 0 8.69977e+07 0.0543799 2.28254e+06 8.74992e+07 5.6339e+06 24633 4.33488e+07 0 0.141803 0.994269 0.798733 8.69977e+07 0.00278472 1.88086e+07 2.43699e+07 1.87664e+07 268 1.87555e+07 1.19464e+07 0.00241634 1.89329e+07 50.2355 0.0260864 0.99547 0 49.9439 GTEX-15CHQ-0011-R7b-SM-69LP1 C1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 800 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.99297 883087 0.945871 0.994337 0.813659 24064 1 76 0.00203512 271 0 8.42315e+07 0.053796 2.1179e+06 8.47112e+07 5.11454e+06 24085 4.19735e+07 0 0.132212 0.994337 0.809051 8.42315e+07 0.00290213 1.81578e+07 2.56183e+07 1.82198e+07 270 1.81946e+07 1.08565e+07 0.00246803 1.83005e+07 50.1451 0.0250014 0.995704 0 50.0852 GTEX-15CHQ-0011-R7b-SM-6AJAC C1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 800 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.991279 910702 0.941496 0.993551 0.79024 24254 1 76 0.00220749 201 0 7.9643e+07 0.0580988 2.21212e+06 8.016e+07 5.638e+06 24279 3.96423e+07 0 0.151256 0.993551 0.785144 7.9643e+07 0.00310548 1.69611e+07 2.84641e+07 1.71561e+07 243 1.71355e+07 9.97574e+06 0.00265546 1.71664e+07 50.0451 0.0275964 0.995823 0 50.2857 GTEX-15CHQ-0011-R7b-SM-D4P1Q C1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 800 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99361 1.08148e+06 0.951755 0.994911 0.826933 25415 1 76 0.00256916 376 0 1.19726e+08 0.0479202 3.54199e+06 1.20338e+08 1.47736e+07 25441 5.96644e+07 0 0.124822 0.994911 0.822724 1.19726e+08 0.00343226 2.57407e+07 2.8987e+07 2.6207e+07 334 2.61839e+07 1.56102e+07 0.00300015 2.59194e+07 49.7461 0.0294337 0.996211 0 50.4488 GTEX-15CHQ-0011-R8b-SM-6AJAI C1, A1 7.3 Brain Brain - Hypothalamus 0001898 800 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.990347 647977 0.943629 0.99282 0.803704 23998 1 76 0.0022162 161 0 7.00689e+07 0.0561181 2.50625e+06 7.05756e+07 4.8229e+06 24016 3.48776e+07 0 0.139925 0.99282 0.797933 7.00689e+07 0.00338281 1.50648e+07 2.2341e+07 1.52491e+07 200 1.51543e+07 7.74043e+06 0.00279805 1.53335e+07 50.2938 0.0355116 0.995293 0 50.304 GTEX-15CHQ-0011-R8b-SM-6EU32 C1, A1 8.2 Brain Brain - Hypothalamus 0001898 800 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991648 619633 0.952301 0.993167 0.810771 24431 1 76 0.0042379 161 0 7.23161e+07 0.047306 1.46529e+06 7.28137e+07 7.07025e+06 24458 3.60027e+07 0 0.14153 0.993167 0.80523 7.23161e+07 0.00423395 1.58043e+07 1.59804e+07 1.58888e+07 175 1.5847e+07 9.94308e+06 0.00423593 1.59606e+07 50.1786 0.0201238 0.994685 0 50.1333 GTEX-15CHQ-0011-R8b-SM-CNPO4 C1, A1 7.3 Brain Brain - Hypothalamus 0001898 800 BP-50313 RNA isolation_PAXgene Tissue miRNA 03/10/2014 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985359 932291 0.950453 0.988363 0.814173 26373 1 76 0.00606185 274 0 1.15408e+08 0.0492873 5.18546e+06 1.16767e+08 3.14271e+07 26410 5.73741e+07 0 0.13628 0.988363 0.804698 1.15408e+08 0.00818938 2.4735e+07 3.5032e+07 2.53871e+07 325 2.54031e+07 1.22645e+07 0.00712238 2.50325e+07 49.6325 0.0444087 0.991366 0 50.6505 GTEX-15CHQ-0011-R9a-SM-6LLHX C1, A1 8.2 Brain Brain - Spinal cord (cervical c-1) 0006469 800 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977419 508852 0.960336 0.985438 0.777798 25865 1 76 0.00257641 218 0 9.22504e+07 0.0392486 920415 9.36136e+07 7.91943e+06 25905 4.56175e+07 0 0.182538 0.985438 0.766472 9.22504e+07 0.0039932 2.02622e+07 1.55629e+07 2.02303e+07 252 2.04641e+07 1.46378e+07 0.00327904 2.07534e+07 50.3509 0.00983206 0.993457 0 49.9606 GTEX-15CHQ-0226-SM-6EU2S 1 C1 2 pieces; 1 mm sq nerve in 1 piece [circled]; 20% fibrous tissue in other piece 7 Adipose Tissue Adipose - Subcutaneous 0002190 852 747 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.991842 138570 0.973399 0.993132 0.77046 23596 1 76 0.00429075 146 0 7.11769e+07 0.0262704 157806 7.16691e+07 6.98476e+06 23625 3.54414e+07 0 0.202939 0.993132 0.765169 7.11769e+07 0.0042336 1.56193e+07 6.69169e+06 1.56632e+07 144 1.56315e+07 1.22891e+07 0.00426221 1.5742e+07 50.1762 0.00220187 0.994423 0 50.0702 GTEX-15CHQ-0326-SM-69LQD 2 C1 6 pieces; well trimmed; 10-20% dermal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 854 745 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992201 211100 0.974337 0.993505 0.762362 23666 1 76 0.00208362 159 0 6.95608e+07 0.025444 329874 7.00155e+07 4.23953e+06 23690 3.46571e+07 0 0.211975 0.993505 0.757411 6.95608e+07 0.0029189 1.5405e+07 7.26776e+06 1.54881e+07 159 1.54635e+07 1.10252e+07 0.00250071 1.55158e+07 50.0844 0.00471144 0.994809 0 50.1345 GTEX-15CHQ-0626-SM-6AJ9E 1 C1 2 pieces; no lesions; 10% external fat 7.6 Blood Vessel Artery - Tibial 0007610 879 722 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991098 193845 0.970208 0.993423 0.804065 21741 1 76 0.00209975 169 0 7.95714e+07 0.029435 181550 8.00982e+07 5.72386e+06 21768 3.95877e+07 0 0.166144 0.993423 0.798776 7.95714e+07 0.00315456 1.69237e+07 5.74929e+06 1.7151e+07 184 1.71097e+07 1.44638e+07 0.00262592 1.71361e+07 50.0385 0.00226659 0.995747 0 50.3337 GTEX-15CHQ-0726-SM-6EU18 1 C1 2 pieces; severe atrophy and fatty replacement up to 50% 7.7 Muscle Muscle - Skeletal 0011907 881 721 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.992093 174213 0.97627 0.993375 0.837836 21632 1 76 0.0040154 132 0 7.71122e+07 0.0234601 591541 7.76264e+07 7.55831e+06 21650 3.84233e+07 0 0.138434 0.993375 0.832286 7.71122e+07 0.00393371 1.64652e+07 7.31242e+06 1.65211e+07 162 1.64577e+07 1.536e+07 0.00397461 1.66239e+07 50.2513 0.00762036 0.994658 0 50.0847 GTEX-15CHQ-0726-SM-CYKOH 1 C1 2 pieces; severe atrophy and fatty replacement up to 50% 7.7 Muscle Muscle - Skeletal 0011907 881 721 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 RIP-Seq GTEX-15CHQ-0826-SM-69LOT 2 C1 2 pieces 7.1 Thyroid Thyroid 0002046 883 720 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.991487 201188 0.965213 0.992632 0.761229 24161 1 76 0.00204164 145 0 7.46278e+07 0.0344515 109792 7.51817e+07 4.54417e+06 24194 3.71774e+07 0 0.203984 0.992632 0.75562 7.46278e+07 0.00280029 1.63396e+07 8.82672e+06 1.63951e+07 159 1.63837e+07 1.35725e+07 0.00242053 1.64343e+07 50.0771 0.00146035 0.993776 0 50.0847 GTEX-15CHQ-1126-SM-686YY 1 C1 2 pieces 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 888 716 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.985414 228363 0.968962 0.98593 0.74704 24104 1 76 0.00258019 154 0 7.4756e+07 0.0305099 257805 7.58228e+07 4.28502e+06 24138 3.71712e+07 0 0.221921 0.98593 0.73653 7.4756e+07 0.00315144 1.64486e+07 1.08533e+07 1.64967e+07 166 1.64335e+07 1.19941e+07 0.00286567 1.6556e+07 50.1857 0.0034001 0.986446 0 50.073 GTEX-15CHQ-1226-SM-6ETZL 1 C1 2 pieces; moderately congested 6.3 Spleen Spleen 0002106 889 716 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.981366 285751 0.958371 0.983087 0.726596 24126 1 76 0.00484487 126 0 7.3888e+07 0.0406936 298777 7.51592e+07 7.14588e+06 24165 3.67266e+07 0 0.231775 0.983087 0.714307 7.3888e+07 0.00500002 1.61895e+07 1.73726e+07 1.62997e+07 140 1.63016e+07 1.09191e+07 0.00492231 1.63155e+07 50.0212 0.00397526 0.984808 0 50.1697 GTEX-15CHQ-1326-SM-6871Z 1 C1 2 pieces; minimal fat 7.6 Heart Heart - Atrial Appendage 0006631 891 714 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989696 259682 0.970532 0.9904 0.798221 22499 1 76 0.00223879 135 0 7.34387e+07 0.0284319 805178 7.41505e+07 4.04582e+06 22515 3.65486e+07 0 0.172311 0.9904 0.790559 7.34387e+07 0.00281997 1.51935e+07 8.0867e+06 1.51987e+07 162 1.51603e+07 1.33844e+07 0.00252917 1.52829e+07 50.2013 0.0108587 0.991104 0 50.0086 GTEX-15CHQ-1526-SM-69LPW 1 C1 2 pieces; focal hypereosinophilia, but no obvious infarction 5.8 Heart Heart - Left Ventricle 0006566 894 712 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.99193 104449 0.988131 0.993681 0.886483 17591 1 76 0.00272728 364 0 6.99038e+07 0.0118383 7.57614e+06 7.03484e+07 3.9574e+06 17592 3.48304e+07 0 0.101649 0.993681 0.880881 6.99038e+07 0.00357644 1.57992e+07 2.21064e+07 1.58468e+07 338 1.55854e+07 1.96826e+06 0.00315111 1.61488e+07 50.8878 0.107695 0.995431 0 50.0751 GTEX-15CHQ-1626-SM-6LLJR 1 C1 2 pieces; large calcified plaques 5.7 Blood Vessel Artery - Coronary 0001621 897 710 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976902 233969 0.964376 0.984303 0.72268 23657 1 76 0.0027601 160 0 7.87216e+07 0.0352716 177165 7.9977e+07 6.5084e+06 23692 3.88917e+07 0 0.241696 0.984303 0.711336 7.87216e+07 0.00396424 1.69029e+07 7.49721e+06 1.68879e+07 165 1.70352e+07 1.16419e+07 0.00335764 1.73112e+07 50.4017 0.0022152 0.991704 0 49.9778 GTEX-15CHQ-2026-SM-6AJAX 2 C1 6 pieces; well trimmed muscle with 1 submucosal gland [outlined] 6.9 Esophagus Esophagus - Muscularis 0004648 902 707 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989629 149094 0.96877 0.992233 0.783279 22598 1 76 0.00223181 128 0 5.97575e+07 0.0310182 413796 6.02253e+07 4.27105e+06 22614 2.97142e+07 0 0.185491 0.992233 0.777195 5.97575e+07 0.00344896 1.28255e+07 5.31904e+06 1.29278e+07 148 1.28871e+07 8.75849e+06 0.00283879 1.30131e+07 50.2431 0.0068708 0.994835 0 50.1987 GTEX-15CHQ-2126-SM-6871M 2 C1 6 pieces; 10% interstitial scarring 6.1 Kidney Kidney - Cortex 0001225 907 703 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.985943 237854 0.971918 0.986775 0.848988 22908 1 76 0.00262971 199 0 7.35894e+07 0.0278894 2.83053e+06 7.45757e+07 3.92644e+06 22921 3.66155e+07 0 0.12293 0.986775 0.83776 7.35894e+07 0.00325119 1.6426e+07 1.44238e+07 1.64128e+07 237 1.62756e+07 8.05347e+06 0.00294019 1.66163e+07 50.5179 0.0379552 0.987607 0 49.98 GTEX-15CHQ-2526-SM-6EU24 3 C1 6 pieces; mucosa largely autolyzed; muscle in somewhat better shape 6.1 Colon Colon - Transverse 0001157 917 695 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.985234 165964 0.968302 0.986849 0.793475 23799 1 76 0.00430531 142 0 6.94444e+07 0.0314373 546420 7.03698e+07 7.28398e+06 23820 3.4527e+07 0 0.174827 0.986849 0.78304 6.94444e+07 0.00443294 1.50859e+07 7.33092e+06 1.517e+07 152 1.51054e+07 1.10292e+07 0.00436902 1.52591e+07 50.2531 0.00776498 0.988464 0 50.1389 GTEX-15CHQ-2626-SM-686YZ 2 C1 6 pieces; well dissected muscle 6.6 Colon Colon - Sigmoid 0001159 919 694 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.98331 225766 0.962844 0.983831 0.791445 23508 1 76 0.00244768 162 0 7.49259e+07 0.0369289 480308 7.61573e+07 3.98967e+06 23538 3.72571e+07 0 0.171399 0.983831 0.778648 7.49259e+07 0.00306472 1.60873e+07 9.60641e+06 1.61433e+07 185 1.60317e+07 1.15343e+07 0.00275604 1.62387e+07 50.3207 0.00630679 0.984352 0 50.087 GTEX-15CHQ-3126-SM-6872B 2 C1 1 piece; all anterior 6 Pituitary Pituitary 0000007 937 678 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986982 281393 0.955117 0.987661 0.763997 25261 1 76 0.00230784 147 0 7.21799e+07 0.0446571 267004 7.30816e+07 4.01263e+06 25298 3.59247e+07 0 0.19112 0.987661 0.754571 7.21799e+07 0.00291815 1.51523e+07 9.8987e+06 1.52128e+07 166 1.51459e+07 1.125e+07 0.00261278 1.52699e+07 50.2039 0.0036535 0.988341 0 50.0996 GTEX-15CHR-0002-SM-6RBJC B1 Blood Whole Blood 0013756 -31 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15CHR-0002-SM-7DLH5 B1 Blood Whole Blood 0013756 -31 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15CHR-0005-SM-9KNUS B1 9 Blood Whole Blood 0013756 -31 BP-48259 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992502 1.49472e+06 0.929544 0.993607 0.767161 21346 1 76 0.00279656 273 0 1.089e+08 0.0700343 419244 1.096e+08 1.31351e+07 21366 5.42782e+07 0 0.162382 0.993607 0.762257 1.089e+08 0.00358136 2.29967e+07 7.13011e+07 2.33137e+07 266 2.33256e+07 2.00741e+07 0.00318853 2.31376e+07 49.7976 0.00382521 0.994712 0 50.3423 GTEX-15CHR-0008-SM-E9U4K B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 404 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992405 920057 0.928784 0.993557 0.803432 19606 1 76 0.00133088 189 0 8.94011e+07 0.0708247 230896 8.99809e+07 2.92041e+06 19613 4.45616e+07 0 0.125352 0.993557 0.798255 8.94011e+07 0.00227892 1.88527e+07 5.87952e+07 1.94553e+07 184 1.94775e+07 2.20001e+07 0.00180435 1.89343e+07 49.2929 0.00256606 0.994708 0 50.7866 GTEX-15CHR-0126-SM-7SB7X 1 B1 6 pieces 6.2 Blood Vessel Artery - Aorta 0001496 169 1280 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763,LCSET-7212 05/09/2015 TruSeq.v1 RNASEQ 0.992106 285601 0.960429 0.99318 0.704265 25919 1 76 0.00246729 275 0 1.1549e+08 0.0392736 581349 1.16283e+08 8.94525e+06 25992 5.74613e+07 0 0.256164 0.99318 0.699462 1.1549e+08 0.00335061 2.50612e+07 1.01403e+07 2.52113e+07 330 2.52065e+07 1.5779e+07 0.00290847 2.51905e+07 49.9841 0.00499942 0.994255 0 50.1493 GTEX-15CHR-0226-SM-7PC2Z 0 B1 2 pieces 8 Heart Heart - Left Ventricle 0006566 179 1270 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987445 313613 0.985844 0.99144 0.86499 20488 1 76 0.00303604 267 0 1.01366e+08 0.0139472 3.38414e+06 1.02241e+08 1.68648e+07 20496 5.03434e+07 0 0.120853 0.99144 0.857586 1.01366e+08 0.00385508 2.22609e+07 2.68032e+07 2.21616e+07 305 2.22947e+07 1.45775e+07 0.00344391 2.24783e+07 50.2051 0.0330997 0.995435 0 49.8883 GTEX-15CHR-0326-SM-7DHN3 0 B1 2 pieces; one piece is ~20% fat/fibrous 8.1 Heart Heart - Atrial Appendage 0006631 187 1262 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991323 98922 0.977292 0.992602 0.839024 22377 1 76 0.00323677 266 0 8.16272e+07 0.022434 2.22683e+06 8.22356e+07 6.41386e+06 22404 4.06651e+07 0 0.138268 0.992602 0.832817 8.16272e+07 0.00485691 1.77594e+07 1.07674e+07 1.81198e+07 259 1.79708e+07 1.22032e+07 0.0040458 1.79809e+07 50.014 0.0270787 0.993882 0 50.5023 GTEX-15CHR-0526-SM-79OLJ 1 B1 2 pieces; specimen is up to 70% fat and nerve 7.1 Blood Vessel Artery - Coronary 0001621 192 1257 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980798 163779 0.974819 0.98435 0.839096 22193 1 76 0.00454086 128 0 6.31403e+07 0.0248459 583702 6.41441e+07 1.39266e+07 22207 3.14176e+07 0 0.135724 0.98435 0.825964 6.31403e+07 0.00570579 1.36717e+07 5.33963e+06 1.37811e+07 144 1.38094e+07 1.09876e+07 0.00512122 1.38492e+07 50.072 0.00909985 0.987902 0 50.1991 GTEX-15CHR-0626-SM-7938V 1 B1 2 pieces; cortex and medulla, small attachment of fat 8.8 Adrenal Gland Adrenal Gland 0002369 195 1254 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994906 343216 0.976154 0.995585 0.812797 21792 1 76 0.00168812 123 0 5.7894e+07 0.0235479 767112 5.81507e+07 2.47504e+06 21816 2.88417e+07 0 0.163357 0.995585 0.809209 5.7894e+07 0.00212011 1.28478e+07 4.9966e+06 1.28626e+07 141 1.29558e+07 1.0077e+07 0.00190397 1.27873e+07 49.6727 0.0131918 0.996264 0 50.0289 GTEX-15CHR-0726-SM-7EPHG 0 B1 2 pieces; some widening of air spaces 6.8 Lung Lung 0008952 199 1250 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991074 174579 0.974257 0.99344 0.80437 24301 1 76 0.00308815 134 0 9.03684e+07 0.0253535 336879 9.09652e+07 1.15531e+07 24334 4.50165e+07 0 0.169887 0.99344 0.799094 9.03684e+07 0.0116266 1.99796e+07 7.43994e+06 2.02178e+07 156 2.02594e+07 1.59221e+07 0.00734722 2.0136e+07 49.8472 0.00370338 0.995806 0 50.2963 GTEX-15CHR-0926-SM-7DUFW 0 B1 6 pieces; well trimmed 7.2 Esophagus Esophagus - Muscularis 0004648 207 1242 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992385 229095 0.9733 0.993229 0.810849 23436 1 76 0.0025935 281 0 9.28436e+07 0.0263857 780415 9.34765e+07 8.05266e+06 23463 4.62605e+07 0 0.162452 0.993229 0.805359 9.28436e+07 0.0038808 2.00542e+07 7.60985e+06 2.02284e+07 258 2.02232e+07 1.61768e+07 0.0032366 2.01307e+07 49.8854 0.00834879 0.994074 0 50.2162 GTEX-15CHR-1126-SM-7EWF4 1 B1 6 pieces; up to 10% attached and periadnexal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 220 1229 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991169 156591 0.966716 0.993086 0.760892 22530 1 76 0.00226446 136 0 5.4422e+07 0.0331209 397676 5.48009e+07 4.79334e+06 22551 2.70883e+07 0 0.205824 0.993086 0.755631 5.4422e+07 0.00347867 1.19433e+07 6.47904e+06 1.20204e+07 133 1.20089e+07 7.53472e+06 0.00287039 1.20509e+07 50.0873 0.00725675 0.995003 0 50.1609 GTEX-15CHR-1226-SM-79OON 1 B1 2 pieces; admixed glands and stroma 6.6 Prostate Prostate 0002367 219 1230 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993968 134137 0.975164 0.994203 0.849433 23338 1 76 0.00281669 165 0 7.13339e+07 0.0245374 780643 7.17499e+07 3.91127e+06 23356 3.55467e+07 0 0.125731 0.994203 0.844508 7.13339e+07 0.00396984 1.55811e+07 6.48158e+06 1.57708e+07 184 1.57334e+07 1.29697e+07 0.00339313 1.56304e+07 49.8359 0.0108801 0.994439 0 50.3025 GTEX-15CHR-1326-SM-79OLT 0 B1 6 pieces; well preserved mucosa and muscularis 7.1 Stomach Stomach 0000945 226 1223 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.962972 177468 0.982103 0.966955 0.841328 20881 1 76 0.0047493 283 0 5.88826e+07 0.017144 571614 6.08949e+07 1.43702e+07 20897 2.92361e+07 0 0.140775 0.966955 0.813526 5.88826e+07 0.00631501 1.36108e+07 8.52538e+07 1.38768e+07 174 1.39403e+07 1.67526e+07 0.00552893 1.37792e+07 49.7094 0.00938689 0.970937 0 50.4838 GTEX-15CHR-1426-SM-7DUGV 1 B1 6 pieces; mucosa and muscularis 7.4 Colon Colon - Transverse 0001157 228 1221 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990255 247452 0.970809 0.991075 0.796494 23739 1 76 0.00322022 278 0 9.2661e+07 0.0267357 1.18941e+06 9.34954e+07 8.11987e+06 23778 4.60611e+07 0 0.174316 0.991075 0.789385 9.2661e+07 0.00435917 2.0543e+07 1.37529e+07 2.08201e+07 277 2.08477e+07 1.31145e+07 0.00378923 2.05759e+07 49.6719 0.0127216 0.991895 0 50.3349 GTEX-15CHR-1726-SM-7DUGW 1 B1 2 pieces; variably sized follicles, some fibrosis 7.3 Thyroid Thyroid 0002046 237 1212 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992671 259889 0.964921 0.993497 0.746464 25351 1 76 0.00267278 207 0 9.52908e+07 0.034792 424456 9.59145e+07 8.74208e+06 25407 4.74604e+07 0 0.218457 0.993497 0.74161 9.52908e+07 0.00405548 2.0861e+07 8.7911e+06 2.09739e+07 227 2.10187e+07 1.47668e+07 0.00336355 2.08882e+07 49.8443 0.00442536 0.994323 0 50.1349 GTEX-15CHR-2026-SM-7MXU2 1 B1 2 pieces; one is 60% attached fat and vessels, second is ~20% fat, fibrosis, PanIN IA 6.9 Pancreas Pancreas 0001150 237 1212 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977559 114137 0.982085 0.986893 0.860747 21149 1 76 0.00321395 100 0 8.0525e+07 0.0177247 260356 8.15945e+07 1.34323e+07 21161 3.98292e+07 0 0.121338 0.986893 0.849465 8.0525e+07 0.00446234 1.86154e+07 2.92956e+07 1.86673e+07 127 1.89223e+07 2.4163e+07 0.00383224 1.91137e+07 50.2516 0.00319085 0.996228 0 50.0696 GTEX-15CHR-2426-SM-7DUFX 1 B1 2 pieces; includes 5-10% mostly internal fat 7.3 Muscle Muscle - Skeletal 0011907 411 1038 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993543 380565 0.97999 0.994225 0.855152 21236 1 76 0.00240725 276 0 8.82787e+07 0.0198188 1.50983e+06 8.87914e+07 7.79683e+06 21255 4.3979e+07 0 0.124838 0.994225 0.850214 8.82787e+07 0.00364102 1.94294e+07 1.25668e+07 1.9788e+07 282 1.97829e+07 1.50653e+07 0.00302371 1.94814e+07 49.616 0.0170042 0.994908 0 50.4572 GTEX-15CHR-5001-SM-AN439 B1 Heart Heart - Left Ventricle 0006566 181 ChIP-Seq GTEX-15CHR-5019-SM-AN43C B1 Muscle Muscle - Skeletal 0011907 404 ChIP-Seq GTEX-15CHS-0001-SM-6RBJP C1 Blood Whole Blood 0013756 788 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15CHS-0001-SM-7DLFY C1 Blood Whole Blood 0013756 788 BP-48254 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-15CHS-0011-R11b-SM-68711 C1, A1 6.4 Brain Brain - Cerebellar Hemisphere 0002037 797 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.990087 457913 0.95118 0.990812 0.79981 23003 1 76 0.00214859 269 0 9.00737e+07 0.0484418 1.93265e+06 9.09089e+07 5.02724e+06 23026 4.48522e+07 0 0.15137 0.990812 0.792462 9.00737e+07 0.00272303 1.94683e+07 1.48372e+07 1.96135e+07 313 1.95193e+07 1.07068e+07 0.0024356 1.9628e+07 50.1389 0.0212592 0.991538 0 50.1857 GTEX-15CHS-0011-R1a-SM-68712 C1, A1 7.6 Brain Brain - Hippocampus 0001954 797 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.986503 526300 0.961049 0.987509 0.850414 21461 1 76 0.00224713 368 0 7.55103e+07 0.0388032 7.18433e+06 7.64655e+07 4.22417e+06 21473 3.75782e+07 0 0.110636 0.987509 0.839791 7.55103e+07 0.00297866 1.65083e+07 2.6727e+07 1.66036e+07 347 1.6313e+07 4.56947e+06 0.00261252 1.68789e+07 50.8526 0.0939552 0.988514 0 50.144 GTEX-15CHS-0011-R2a-SM-6EU2X C1, A1 6.3 Brain Brain - Substantia nigra 0002038 797 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.992259 372578 0.964028 0.993701 0.841359 22126 1 76 0.0041202 208 0 7.20233e+07 0.035736 5.55353e+06 7.24798e+07 6.95252e+06 22144 3.58649e+07 0 0.122669 0.993701 0.83606 7.20233e+07 0.00419726 1.58312e+07 1.75411e+07 1.61051e+07 228 1.58256e+07 6.53702e+06 0.00415867 1.62182e+07 50.6126 0.0766217 0.995143 0 50.4289 GTEX-15CHS-0011-R3a-SM-6AJAE C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 797 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.990311 705329 0.953712 0.992549 0.803521 22584 1 76 0.00201395 265 0 7.8738e+07 0.0460286 5.78264e+06 7.93291e+07 5.3116e+06 22593 3.92081e+07 0 0.150191 0.992549 0.797534 7.8738e+07 0.00293977 1.67369e+07 4.2614e+07 1.69546e+07 302 1.67348e+07 6.22892e+06 0.00247582 1.71344e+07 50.59 0.0728943 0.994786 0 50.3231 GTEX-15CHS-0011-R3a-SM-6EU1E C1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 797 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991941 587465 0.955363 0.993412 0.828383 22627 1 76 0.00421002 199 0 7.35191e+07 0.0443595 4.89996e+06 7.40066e+07 7.10494e+06 22643 3.66186e+07 0 0.126981 0.993412 0.822925 7.35191e+07 0.00421877 1.59604e+07 2.52432e+07 1.6081e+07 244 1.5918e+07 6.54194e+06 0.00421439 1.62433e+07 50.5057 0.0662097 0.994883 0 50.1882 GTEX-15CHS-0011-R4b-SM-6EU1D C1, A1 6.6 Brain Brain - Amygdala 0001876 797 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991031 781134 0.949307 0.992586 0.830655 22098 1 76 0.00415245 264 0 7.47838e+07 0.0504891 7.38004e+06 7.53424e+07 7.37378e+06 22114 3.72473e+07 0 0.118652 0.992586 0.824496 7.47838e+07 0.00417738 1.59748e+07 3.5523e+07 1.64245e+07 267 1.61206e+07 5.16497e+06 0.0041649 1.64063e+07 50.4392 0.0979533 0.99414 0 50.6941 GTEX-15CHS-0011-R5b-SM-69LP3 C1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 797 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.990537 987078 0.94785 0.991995 0.804383 21451 1 76 0.00181567 264 0 8.01361e+07 0.0519751 5.94778e+06 8.07827e+07 4.68456e+06 21462 3.99441e+07 0 0.143467 0.991995 0.797944 8.01361e+07 0.00263745 1.69792e+07 5.57653e+07 1.70165e+07 313 1.67443e+07 4.84633e+06 0.00222595 1.73633e+07 50.9074 0.0736269 0.993454 0 50.055 GTEX-15CHS-0011-R5b-SM-69LPA C1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 797 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.991549 888724 0.95134 0.992907 0.802414 22237 1 76 0.00185391 265 0 8.7606e+07 0.0484686 6.36751e+06 8.82318e+07 5.63221e+06 22252 4.36762e+07 0 0.148926 0.992907 0.796723 8.7606e+07 0.00264332 1.84793e+07 5.6617e+07 1.8774e+07 328 1.84312e+07 5.71293e+06 0.00224807 1.89346e+07 50.6735 0.0721679 0.994265 0 50.3955 GTEX-15CHS-0011-R6a-SM-6AJC1 C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 797 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.988226 593284 0.956913 0.9904 0.799247 22910 1 76 0.00203121 267 0 8.49928e+07 0.0429316 6.40912e+06 8.58166e+07 6.06709e+06 22922 4.23302e+07 0 0.157666 0.9904 0.791574 8.49928e+07 0.00287369 1.80305e+07 4.42291e+07 1.81435e+07 330 1.79766e+07 6.29362e+06 0.00245153 1.83749e+07 50.5478 0.0746838 0.992574 0 50.1561 GTEX-15CHS-0011-R7a-SM-69LQL C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 797 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.990908 911214 0.954624 0.9922 0.818989 19845 1 76 0.00178781 369 0 8.07613e+07 0.0452351 7.16794e+06 8.13962e+07 4.90001e+06 19851 4.027e+07 0 0.135635 0.9922 0.8126 8.07613e+07 0.00256167 1.71466e+07 5.93872e+07 1.73191e+07 345 1.68592e+07 4.70473e+06 0.00217424 1.77158e+07 51.2388 0.0880623 0.993492 0 50.2502 GTEX-15CHS-0011-R8a-SM-6EU1L C1, A1 5.9 Brain Brain - Hypothalamus 0001898 797 BP-50160 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.979061 587292 0.948217 0.981179 0.852218 21174 1 76 0.00437039 167 0 6.26178e+07 0.0514624 5.45214e+06 6.3819e+07 6.72351e+06 21187 3.11439e+07 0 0.0959988 0.981179 0.836178 6.26178e+07 0.00448158 1.33888e+07 2.2925e+07 1.38341e+07 176 1.36508e+07 7.06679e+06 0.00442587 1.37017e+07 50.0931 0.0854314 0.983296 0 50.8179 GTEX-15CHS-0011-R9b-SM-6LLH8 C1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 797 BP-50179 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 EXCLUDE 0.977737 738823 0.957027 0.986535 0.815215 24330 1 76 0.00246698 391 0 1.04609e+08 0.0425329 3.2423e+06 1.06036e+08 9.41163e+06 24357 5.17011e+07 0 0.141812 0.986535 0.804238 1.04609e+08 0.00387825 2.297e+07 2.10148e+07 2.3155e+07 336 2.33664e+07 1.5316e+07 0.00316632 2.36462e+07 50.2976 0.0305772 0.995333 0 50.2006 GTEX-15CHS-0226-SM-6871L 0 C1 2 pieces, ~20% vascular, fascia, peripheral nerve elements, rep. delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 877 480 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.990217 218526 0.973543 0.990795 0.818475 22917 1 76 0.00206671 174 0 7.54528e+07 0.0261208 253537 7.61538e+07 4.02343e+06 22941 3.75835e+07 0 0.155068 0.990795 0.810941 7.54528e+07 0.00263095 1.66762e+07 7.42064e+06 1.67455e+07 185 1.66908e+07 1.37916e+07 0.00234866 1.67758e+07 50.127 0.00332927 0.991373 0 50.1037 GTEX-15CHS-0326-SM-6AJ9V 0 C1 2 pieces, trace rim of adherent fat, ~0.2mm 6.5 Nerve Nerve - Tibial 0001323 906 451 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.990811 153666 0.962067 0.993178 0.718556 24417 1 76 0.00215209 162 0 7.41647e+07 0.0376768 336653 7.46741e+07 4.84569e+06 24462 3.68958e+07 0 0.243511 0.993178 0.713654 7.41647e+07 0.00324869 1.6219e+07 6.87473e+06 1.62957e+07 171 1.62625e+07 9.7991e+06 0.00269908 1.64171e+07 50.2367 0.00450829 0.995545 0 50.1179 GTEX-15CHS-0426-SM-6LLJ8 0 C1 2 pieces, no adherent fat/ atherosis 7.8 Blood Vessel Artery - Tibial 0007610 908 450 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 EXCLUDE 0.978149 155674 0.972108 0.986642 0.8154 22079 1 76 0.00240792 168 0 7.68839e+07 0.0274433 310612 7.79248e+07 6.84977e+06 22101 3.80065e+07 0 0.156708 0.986642 0.804508 7.68839e+07 0.00389213 1.64442e+07 5.88702e+06 1.6407e+07 169 1.66284e+07 1.48758e+07 0.00314364 1.68322e+07 50.3045 0.00398605 0.995136 0 49.9434 GTEX-15CHS-0526-SM-6EU2D 0 C1 2 pieces, minimal interstitial fat 8 Muscle Muscle - Skeletal 0011907 917 441 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.992807 156970 0.984477 0.994317 0.880024 19101 1 76 0.00396999 124 0 6.89772e+07 0.0153109 816223 6.93714e+07 7.28971e+06 19109 3.43701e+07 0 0.104453 0.994317 0.875023 6.89772e+07 0.00399808 1.50664e+07 7.5277e+06 1.51502e+07 148 1.50872e+07 1.42988e+07 0.00398401 1.5231e+07 50.2371 0.011766 0.995828 0 50.1387 GTEX-15CHS-0526-SM-CYKOJ 0 C1 2 pieces, minimal interstitial fat 8 Muscle Muscle - Skeletal 0011907 917 441 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 RIP-Seq GTEX-15CHS-0626-SM-6AJA3 0 C1 6 pieces, minimal adherent dermal fat, squamous epithelium is ~70 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 922 436 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.99011 176295 0.971351 0.992754 0.764153 24288 1 76 0.00216477 157 0 7.68369e+07 0.0283811 316378 7.73978e+07 5.25155e+06 24318 3.82208e+07 0 0.207197 0.992754 0.758616 7.68369e+07 0.00343054 1.69486e+07 7.82117e+06 1.70003e+07 171 1.70052e+07 1.29822e+07 0.00279597 1.71402e+07 50.1978 0.00408769 0.995397 0 50.0761 GTEX-15CHS-0726-SM-686ZJ 1 C1 2 pieces, spermatogenesis is present 6.1 Testis Testis 0000473 951 407 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.991009 323961 0.928458 0.991804 0.721116 34276 1 76 0.0021022 281 0 1.01939e+08 0.0712566 1.08478e+06 1.02781e+08 5.69765e+06 34347 5.07997e+07 0 0.207341 0.991804 0.715206 1.01939e+08 0.00269227 2.12703e+07 1.43924e+07 2.14027e+07 269 2.13815e+07 1.55901e+07 0.002397 2.13665e+07 49.9825 0.0105543 0.992599 0 50.1551 GTEX-15CHS-0826-SM-6ETZW 1 C1 2 pieces, mainly fibroadipose elements; trace ducts, rep delineated 5.8 Breast Breast - Mammary Tissue 0008367 956 403 BP-49721 RNA Extraction from Paxgene-derived Lysate Plate Based 02/21/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991415 147950 0.975386 0.992721 0.765518 23578 1 76 0.00419405 140 0 7.52632e+07 0.024309 351121 7.5815e+07 7.26928e+06 23613 3.74671e+07 0 0.209868 0.992721 0.759945 7.52632e+07 0.00421901 1.66958e+07 7.06474e+06 1.6701e+07 160 1.66546e+07 1.14952e+07 0.00420651 1.68411e+07 50.2784 0.00463129 0.994027 0 50.0078 GTEX-15CHS-0926-SM-5YY94 1 C1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 959 400 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5304 05/19/2014 TruSeq.v1 EXCLUDE 0.989032 244264 0.966137 0.990761 0.728394 25742 1 76 0.00274351 210 0 1.0172e+08 0.0335842 264892 1.02669e+08 4.53339e+06 25788 5.05826e+07 0 0.237743 0.990761 0.721664 1.0172e+08 0.00379395 2.22814e+07 9.05695e+06 2.23834e+07 235 2.24043e+07 1.54324e+07 0.00326781 2.24349e+07 50.0342 0.00258006 0.992489 0 50.1142 GTEX-15CHS-1226-SM-5ZZVR 1 C1 2 pieces <5% fascia, rep delineated 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 968 392 BP-49515 RNA Extraction from Paxgene-derived Lysate Plate Based 02/14/2014 LCSET-5305 05/26/2014 TruSeq.v1 EXCLUDE 0.991554 164355 0.974154 0.993262 0.765034 22707 1 76 0.00219786 117 0 5.45419e+07 0.0254786 230336 5.49119e+07 4.81517e+06 22732 2.71535e+07 0 0.209121 0.993262 0.759879 5.45419e+07 0.00346707 1.20472e+07 5.48294e+06 1.20865e+07 128 1.20717e+07 8.46128e+06 0.00283138 1.21548e+07 50.1716 0.00419465 0.994969 0 50.0814 GTEX-15CHS-1426-SM-6871W 1 C1 2 pieces, ~10% macrovesicular steatosis 5.8 Liver Liver 0001114 971 390 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.98979 281988 0.970364 0.990579 0.794181 22939 1 76 0.00216875 268 0 9.60582e+07 0.0294671 1.99595e+06 9.69717e+07 5.35280e+06 22963 4.78611e+07 0 0.176182 0.990579 0.7867 9.60582e+07 0.00268085 2.09674e+07 1.92366e+07 2.11831e+07 325 2.11068e+07 1.11756e+07 0.0024246 2.11119e+07 50.006 0.0205828 0.991369 0 50.2558 GTEX-15D1Q-0004-SM-6RBJB C1 Blood Whole Blood 0013756 578 BP-48432 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15D1Q-0004-SM-7DLFO C1 Blood Whole Blood 0013756 578 BP-48432 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2014 LCSET-6363 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15D1Q-0006-SM-9KNTN C1 7.9 Blood Whole Blood 0013756 578 BP-48441 RNA isolation_PAXgene Blood RNA (Manual) 01/17/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990635 785608 0.953633 0.992046 0.651096 22626 1 76 0.0033297 165 0 9.92863e+07 0.0457906 450062 1.00082e+08 1.08016e+07 22674 4.94147e+07 0 0.302537 0.992046 0.645917 9.92863e+07 0.00445813 2.15986e+07 2.80611e+07 2.17349e+07 183 2.18301e+07 1.39876e+07 0.00389311 2.16491e+07 49.7919 0.00449691 0.993457 0 50.1573 GTEX-15D1Q-0008-SM-E9U4L C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 682 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989521 1.19052e+06 0.887403 0.990719 0.749295 19158 1 76 0.00135973 149 0 7.66249e+07 0.11193 283171 7.73427e+07 2.64676e+06 19167 3.81817e+07 0 0.138108 0.990719 0.742341 7.66249e+07 0.00226843 1.53718e+07 8.64766e+07 1.61346e+07 141 1.61496e+07 1.77822e+07 0.00181353 1.54545e+07 48.9003 0.00366125 0.991918 0 51.2106 GTEX-15D1Q-0011-R10a-SM-AHZNI C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 628 ChIP-Seq GTEX-15D1Q-0126-SM-7KUG6 0 C1 6 pieces, squamous epithelium is ~30-40 microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 680 624 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988928 258959 0.972735 0.991705 0.762213 25350 1 76 0.00302163 282 0 9.95359e+07 0.0269744 1.09732e+06 1.00368e+08 7.99795e+06 25396 4.94907e+07 0 0.210521 0.991705 0.755891 9.95359e+07 0.00336481 2.18699e+07 1.10239e+07 2.20821e+07 260 2.21742e+07 1.69493e+07 0.00319274 2.20383e+07 49.8463 0.0109329 0.994483 0 50.2413 GTEX-15D1Q-0426-SM-6AJ9G 1 C1 2 pieces, no abnormalities 6.2 Heart Heart - Atrial Appendage 0006631 697 608 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990599 152294 0.979083 0.993173 0.81616 21956 1 76 0.00214808 264 0 8.11699e+07 0.0207694 3.89314e+06 8.17279e+07 5.27928e+06 21982 4.0391e+07 0 0.162923 0.993173 0.810588 8.11699e+07 0.00339857 1.78549e+07 1.72088e+07 1.80188e+07 274 1.77814e+07 7.95975e+06 0.0027717 1.82793e+07 50.6904 0.0476354 0.995747 0 50.2285 GTEX-15D1Q-0526-SM-6AJAY 2 C1 2 pieces, moderate congestion, evidence of chronic congestive heart failure (hemosiderin laden macrophages delineated) 6.4 Lung Lung 0008952 703 603 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990405 143199 0.972252 0.992736 0.73544 22538 1 76 0.00233969 122 0 6.05025e+07 0.0274609 522362 6.09452e+07 4.13938e+06 22568 3.00879e+07 0 0.236812 0.992736 0.730098 6.05025e+07 0.00339754 1.33804e+07 5.9022e+06 1.34624e+07 145 1.34401e+07 8.11909e+06 0.00286738 1.35389e+07 50.1831 0.00857101 0.995067 0 50.1527 GTEX-15D1Q-0526-SM-CYKT2 2 C1 2 pieces, moderate congestion, evidence of chronic congestive heart failure (hemosiderin laden macrophages delineated) 6.4 Lung Lung 0008952 703 603 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 RIP-Seq GTEX-15D1Q-0626-SM-6AJAZ 1 C1 2 pieces, mild thryoiditis 6.7 Thyroid Thyroid 0002046 706 600 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990776 161480 0.961076 0.993162 0.73567 23901 1 76 0.00216403 137 0 6.87753e+07 0.0386456 219356 6.92488e+07 4.60546e+06 23933 3.42263e+07 0 0.225406 0.993162 0.730639 6.87753e+07 0.00308546 1.49169e+07 6.50149e+06 1.50022e+07 147 1.50232e+07 1.13288e+07 0.00262364 1.50508e+07 50.0459 0.00316765 0.995548 0 50.1425 GTEX-15D1Q-1226-SM-686Z1 0 C1 2 pieces, no adherent fat, no atherosis. 7.8 Blood Vessel Artery - Tibial 0007610 715 594 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.986555 248154 0.965344 0.987171 0.760068 22356 1 76 0.0023876 147 0 7.09997e+07 0.0342826 273669 7.19224e+07 3.68651e+06 22383 3.53005e+07 0 0.205277 0.987171 0.750317 7.09997e+07 0.00299898 1.52224e+07 9.22666e+06 1.52799e+07 155 1.52021e+07 1.24328e+07 0.0026931 1.5348e+07 50.2389 0.00380506 0.987787 0 50.0943 GTEX-15D1Q-1326-SM-69LOA 1 C1 2 pieces, minimal fascia/vascular elements 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 716 594 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.990304 298141 0.96549 0.991946 0.768825 23572 1 76 0.00210451 155 0 6.92307e+07 0.0343008 1.55779e+06 6.97929e+07 3.93062e+06 23604 3.44482e+07 0 0.196665 0.991946 0.762632 6.92307e+07 0.00300532 1.52147e+07 9.82498e+06 1.52357e+07 183 1.51919e+07 8.4392e+06 0.00255417 1.53752e+07 50.3 0.0223202 0.993588 0 50.0344 GTEX-15D1Q-1526-SM-686Z2 1 C1 6 pieces, confirmed target muscularis 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 719 592 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.978951 268280 0.965742 0.979618 0.817175 22181 1 76 0.00264891 198 0 7.46426e+07 0.0340769 2.64799e+06 7.61956e+07 4.38329e+06 22198 3.70803e+07 0 0.148567 0.979618 0.800519 7.46426e+07 0.00332402 1.64526e+07 1.25963e+07 1.6489e+07 221 1.63406e+07 9.21008e+06 0.00298624 1.66477e+07 50.4654 0.0347525 0.980284 0 50.0552 GTEX-15D1Q-2826-SM-6LLH7 0 C1 6 pieces, squamous epithleium is ~40 microns, adherent dermal fat up to ~1mm 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 747 571 BP-49874 RNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976272 221001 0.966743 0.984988 0.695269 25741 1 76 0.00265651 207 0 9.66989e+07 0.0330338 725577 9.81727e+07 8.1039e+06 25799 4.77806e+07 0 0.271474 0.984988 0.684831 9.66989e+07 0.00416423 2.11677e+07 1.06355e+07 2.11004e+07 205 2.14007e+07 1.36669e+07 0.0034037 2.16908e+07 50.3366 0.00739083 0.993704 0 49.9204 GTEX-15D79-0004-SM-6RBJR C1 Blood Whole Blood 0013756 745 BP-48432 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15D79-0004-SM-7DLH2 C1 Blood Whole Blood 0013756 745 BP-48432 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2014 LCSET-6363 01/09/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15D79-0005-SM-7P8TS C1 9.1 Blood Whole Blood 0013756 745 BP-48441 RNA isolation_PAXgene Blood RNA (Manual) 01/17/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.906098 512502 0.961273 0.942206 0.749449 21649 1 76 0.00419563 104 0 7.85384e+07 0.037606 232965 8.33559e+07 1.22833e+07 21660 3.76145e+07 0 0.211823 0.942206 0.706136 7.85384e+07 0.0110929 1.72656e+07 9.71495e+07 1.69216e+07 116 1.85933e+07 1.65459e+07 0.0075121 1.86084e+07 50.0202 0.00279482 0.978313 0 49.4968 GTEX-15D79-0008-SM-E6CPM C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 907 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514,LCSET-10947 05/01/2017 TruSeq.v1 RNASEQ 0.991848 1.37286e+06 0.984182 0.994046 0.881122 21951 1 76 0.00159864 404 0 1.79866e+08 0.0154719 337000 1.80943e+08 1.50064e+07 21971 8.94993e+07 0 0.10306 0.994046 0.875876 1.79866e+08 0.00283903 4.0735e+07 1.87094e+07 4.07216e+07 377 4.10263e+07 4.92641e+07 0.00221746 4.08062e+07 49.8655 0.00186246 0.996243 0 49.9918 GTEX-15D79-0426-SM-6AJAW 1 C1 2 pieces; well trimmed; no plaques 5.8 Blood Vessel Artery - Tibial 0007610 942 1051 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990021 106076 0.969255 0.992345 0.851955 19760 1 76 0.0018711 131 0 5.72134e+07 0.0303973 262264 5.76548e+07 3.5941e+06 19766 2.84668e+07 0 0.1173 0.992345 0.845433 5.72134e+07 0.00306363 1.19008e+07 7.08391e+06 1.20892e+07 137 1.20071e+07 1.22731e+07 0.00246597 1.21078e+07 50.2088 0.00454887 0.994669 0 50.3927 GTEX-15D79-0526-SM-6ETZP 1 C1 2 pieces; minimal internal fat 8.2 Muscle Muscle - Skeletal 0011907 966 1027 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.993041 191497 0.984435 0.994272 0.878854 19905 1 76 0.00379278 200 0 8.50064e+07 0.0153106 802164 8.54961e+07 8.14216e+06 19915 4.23707e+07 0 0.105581 0.994272 0.873821 8.50064e+07 0.00375142 1.87301e+07 7.84138e+06 1.86697e+07 204 1.869e+07 1.89309e+07 0.00377213 1.88178e+07 50.1703 0.00938246 0.995503 0 49.9192 GTEX-15D79-3126-SM-6M48C 2 C1 1 piece; posterior and anterior present 6 Pituitary Pituitary 0000007 1039 976 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994268 187442 0.961178 0.995808 0.809004 23470 1 76 0.00237906 125 0 5.753e+07 0.0385935 328034 5.77722e+07 7.60661e+06 23492 2.86708e+07 0 0.152174 0.995808 0.805613 5.753e+07 0.00363475 1.23535e+07 9.09484e+06 1.23786e+07 144 1.23763e+07 9.21482e+06 0.00300593 1.24431e+07 50.1346 0.00567806 0.997348 0 50.0508 GTEX-15DCD-0001-SM-6RBJS C1 Blood Whole Blood 0013756 619 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DCD-0001-SM-7DLGT C1 Blood Whole Blood 0013756 619 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15DCD-0006-SM-7RHG4 C1 8.2 Blood Whole Blood 0013756 619 BP-48557 RNA isolation_PAXgene Blood RNA (Manual) 01/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.988269 329709 0.977959 0.990275 0.78607 21214 1 76 0.00288781 177 0 8.96321e+07 0.021222 254533 9.05123e+07 8.11454e+06 21229 4.46062e+07 0 0.191889 0.990275 0.778425 8.96321e+07 0.00463048 2.03753e+07 5.14488e+07 2.05038e+07 188 2.05459e+07 1.78669e+07 0.00375738 2.0517e+07 49.9648 0.00281214 0.99228 0 50.1572 GTEX-15DCD-0008-SM-E76Q6 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 693 BP-48522 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994089 888871 0.939596 0.99552 0.825079 18968 1 76 0.00146602 150 0 7.37904e+07 0.0601416 240957 7.41224e+07 4.49319e+06 18980 3.6777e+07 0 0.114517 0.99552 0.821383 7.37904e+07 0.00222994 1.57605e+07 4.00774e+07 1.60851e+07 156 1.61257e+07 1.82363e+07 0.00184743 1.58252e+07 49.5298 0.0032508 0.996951 0 50.5097 GTEX-15DCD-0011-R10a-SM-AHZN4 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 635 ChIP-Seq GTEX-15DCD-0011-R10b-SM-6LPII C1, A1 8.8 Brain Brain - Frontal Cortex (BA9) 0009834 635 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992881 592193 0.958711 0.99507 0.860128 22802 1 76 0.0023803 268 0 7.43737e+07 0.0407868 2.99247e+06 7.47422e+07 1.20489e+07 22815 3.70416e+07 0 0.0985826 0.99507 0.855888 7.43737e+07 0.00318006 1.62491e+07 1.95015e+07 1.62655e+07 260 1.62249e+07 9.67386e+06 0.0027793 1.64443e+07 50.3359 0.0400373 0.997259 0 50.0252 GTEX-15DCD-0011-R10b-SM-CYKO7 C1, A1 8.8 Brain Brain - Frontal Cortex (BA9) 0009834 635 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 RIP-Seq GTEX-15DCD-0011-R11a-SM-69LP4 C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 635 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.991494 691406 0.934137 0.992746 0.718634 23911 1 76 0.00213922 157 0 7.22797e+07 0.0654633 1.2565e+06 7.28079e+07 4.72234e+06 23939 3.59944e+07 0 0.215503 0.992746 0.713422 7.22797e+07 0.00283258 1.54658e+07 2.27281e+07 1.54858e+07 173 1.5478e+07 8.80514e+06 0.00248546 1.5566e+07 50.1417 0.0172578 0.993999 0 50.0324 GTEX-15DCD-0011-R11a-SM-6AJAF C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 635 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.990014 534028 0.93883 0.992286 0.705047 24051 1 76 0.00229859 157 0 7.73632e+07 0.0607189 1.16156e+06 7.79646e+07 5.33463e+06 24088 3.84859e+07 0 0.233783 0.992286 0.699609 7.73632e+07 0.00314286 1.65515e+07 1.81196e+07 1.65913e+07 183 1.66239e+07 9.37204e+06 0.00271976 1.66822e+07 50.0876 0.0148986 0.994559 0 50.06 GTEX-15DCD-0011-R11a-SM-D4P1R C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 635 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992238 881131 0.944657 0.993624 0.729286 25836 1 76 0.00271825 273 0 1.18869e+08 0.0549059 2.24615e+06 1.19632e+08 1.5393e+07 25890 5.9184e+07 0 0.215371 0.993624 0.724636 1.18869e+08 0.00355933 2.54978e+07 2.47572e+07 2.58363e+07 328 2.58767e+07 1.52873e+07 0.0031382 2.56071e+07 49.7382 0.0187755 0.99501 0 50.3297 GTEX-15DCD-0011-R1b-SM-6LPIJ C1, A1 7.6 Brain Brain - Hippocampus 0001954 635 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991933 779582 0.950785 0.994164 0.831114 21757 1 76 0.00241634 266 0 6.835e+07 0.0490223 6.51443e+06 6.87512e+07 9.94402e+06 21763 3.40493e+07 0 0.119671 0.994164 0.826264 6.835e+07 0.00330412 1.47506e+07 3.48878e+07 1.48285e+07 267 1.46816e+07 4.73558e+06 0.00285923 1.50425e+07 50.6072 0.0947538 0.996395 0 50.1317 GTEX-15DCD-0011-R2b-SM-6LPIE C1, A1 6.8 Brain Brain - Substantia nigra 0002038 635 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992877 380013 0.960979 0.994971 0.827854 23010 1 76 0.00248435 201 0 6.67748e+07 0.0387749 6.31431e+06 6.71123e+07 1.01376e+07 23027 3.32639e+07 0 0.133125 0.994971 0.823691 6.67748e+07 0.00336247 1.47449e+07 1.91007e+07 1.46499e+07 220 1.45015e+07 6.67777e+06 0.00292249 1.50292e+07 50.8935 0.0940856 0.997065 0 49.8384 GTEX-15DCD-0011-R3b-SM-69LOY C1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 635 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.99392 640454 0.95065 0.995122 0.814328 23934 1 76 0.00178138 269 0 7.68861e+07 0.0489441 3.26866e+06 7.7263e+07 4.54045e+06 23956 3.83168e+07 0 0.136322 0.995122 0.810356 7.68861e+07 0.00257448 1.67434e+07 2.22091e+07 1.67444e+07 266 1.66607e+07 9.09311e+06 0.00217745 1.692e+07 50.3862 0.0423056 0.996323 0 50.0014 GTEX-15DCD-0011-R3b-SM-6EU1I C1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 635 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.992225 537087 0.955398 0.993508 0.811486 24513 1 76 0.0040944 206 0 8.12017e+07 0.0441823 2.76259e+06 8.17323e+07 8.22778e+06 24543 4.04327e+07 0 0.143912 0.993508 0.806217 8.12017e+07 0.00407365 1.77528e+07 1.64729e+07 1.78051e+07 236 1.77327e+07 1.06698e+07 0.00408404 1.79346e+07 50.2831 0.0338005 0.99479 0 50.0735 GTEX-15DCD-0011-R3b-SM-D4P1P C1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 635 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994395 860666 0.955799 0.995507 0.822598 25584 1 76 0.00232093 376 0 1.16748e+08 0.0437894 5.87262e+06 1.17275e+08 1.35133e+07 25612 5.8187e+07 0 0.133201 0.995507 0.818903 1.16748e+08 0.00312738 2.52297e+07 2.90278e+07 2.57638e+07 334 2.56516e+07 1.43776e+07 0.0027237 2.54478e+07 49.8006 0.0500755 0.996619 0 50.5237 GTEX-15DCD-0011-R4a-SM-69LPB C1, A1 7.5 Brain Brain - Amygdala 0001876 635 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.990385 830636 0.950795 0.99186 0.80986 23631 1 76 0.00175884 267 0 7.98527e+07 0.0488852 6.10248e+06 8.05081e+07 4.78428e+06 23655 3.97875e+07 0 0.140935 0.99186 0.803268 7.98527e+07 0.00254009 1.73207e+07 3.22296e+07 1.73488e+07 290 1.71799e+07 7.76866e+06 0.00214888 1.75951e+07 50.5971 0.0757996 0.993335 0 50.0406 GTEX-15DCD-0011-R5a-SM-69LPC C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 635 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.992438 905513 0.945153 0.993723 0.786294 24279 1 76 0.00182554 267 0 8.24542e+07 0.0545051 3.96198e+06 8.2975e+07 5.22943e+06 24305 4.10913e+07 0 0.158858 0.993723 0.781359 8.24542e+07 0.00255414 1.77428e+07 3.40601e+07 1.77329e+07 271 1.76461e+07 8.77216e+06 0.00218937 1.79417e+07 50.4153 0.047749 0.995007 0 49.9862 GTEX-15DCD-0011-R5a-SM-6EU1F C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 635 BP-50193 RNA isolation_PAXgene Tissue miRNA 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.991207 741096 0.95056 0.992635 0.808179 23791 1 76 0.00403126 197 0 7.76458e+07 0.0491171 4.34696e+06 7.82219e+07 7.42149e+06 23811 3.8671e+07 0 0.142381 0.992635 0.802227 7.76458e+07 0.00393165 1.68130e+07 2.78526e+07 1.68463e+07 246 1.6798e+07 8.57696e+06 0.00398153 1.69917e+07 50.2866 0.0555721 0.994063 0 50.0494 GTEX-15DCD-0011-R5a-SM-CXZKZ C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 635 BP-50392 RNA isolation_PAXgene Tissue miRNA 03/11/2014 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993379 959782 0.953886 0.994789 0.807561 25443 1 76 0.00199818 371 0 1.07888e+08 0.0457827 6.00367e+06 1.08453e+08 7.03142e+06 25472 5.37513e+07 0 0.146325 0.994789 0.803353 1.07888e+08 0.00256637 2.31157e+07 2.74231e+07 2.3884e+07 362 2.37546e+07 1.20185e+07 0.00228187 2.33856e+07 49.6087 0.0553575 0.996199 0 50.8173 GTEX-15DCD-0011-R6b-SM-6M46L C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 635 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994145 701019 0.945417 0.995591 0.79951 23818 1 76 0.00236044 154 0 6.74177e+07 0.0542519 3.32417e+06 6.77163e+07 8.78676e+06 23837 3.36003e+07 0 0.145907 0.995591 0.795984 6.74177e+07 0.00327904 1.45542e+07 2.16606e+07 1.46045e+07 190 1.4565e+07 7.62258e+06 0.00281907 1.46958e+07 50.2235 0.0490897 0.997036 0 50.0862 GTEX-15DCD-0011-R7b-SM-6LPID C1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 635 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992533 610685 0.952134 0.994807 0.819348 22452 1 76 0.0024435 195 0 6.29686e+07 0.0476474 4.77184e+06 6.32973e+07 1.01693e+07 22466 3.13667e+07 0 0.132785 0.994807 0.815093 6.29686e+07 0.00335925 1.37248e+07 2.8124e+07 1.35826e+07 207 1.35228e+07 5.4104e+06 0.00290033 1.39204e+07 50.7244 0.0753877 0.997081 0 49.7395 GTEX-15DCD-0011-R8b-SM-7KUEF C1, A1 7.4 Brain Brain - Hypothalamus 0001898 635 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.983424 512993 0.965043 0.989882 0.845523 23265 1 76 0.00302107 213 0 7.46146e+07 0.034644 6.04612e+06 7.53772e+07 6.88584e+06 23285 3.69481e+07 0 0.119519 0.989882 0.836969 7.46146e+07 0.00359237 1.64038e+07 1.2882e+07 1.65474e+07 248 1.66718e+07 9.7758e+06 0.00330486 1.67273e+07 50.0832 0.0802115 0.99634 0 50.2179 GTEX-15DCD-0011-R9b-SM-7KUED C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 635 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984647 732749 0.957071 0.990014 0.80422 24591 1 76 0.00319557 293 0 8.74102e+07 0.0425601 2.35758e+06 8.82918e+07 8.04616e+06 24626 4.33243e+07 0 0.152851 0.990014 0.79619 8.74102e+07 0.00362333 1.91114e+07 1.79845e+07 1.93968e+07 261 1.95288e+07 1.3371e+07 0.00340829 1.94415e+07 49.888 0.0267021 0.995382 0 50.3705 GTEX-15DCD-0126-SM-7KUEK 1 C1 6 pieces; 10 to 20% internal (periadnexal) fat; epidermis is ~35 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 692 524 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986216 336127 0.968298 0.990676 0.77044 24806 1 76 0.00330045 173 0 7.49948e+07 0.031476 338546 7.57007e+07 7.23329e+06 24834 3.72105e+07 0 0.197858 0.990676 0.763256 7.49948e+07 0.00345789 1.61844e+07 7.51134e+06 1.63565e+07 162 1.65304e+07 1.27679e+07 0.00337882 1.63247e+07 49.6869 0.00447217 0.995135 0 50.2644 GTEX-15DCD-0226-SM-6LPKC 1 C1 2 pieces; ~10% fascia and vascular component (outlined) 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 694 523 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992199 133500 0.970735 0.994307 0.771107 23187 1 76 0.00265354 127 0 5.8817e+07 0.0289911 544787 5.91538e+07 9.10702e+06 23217 2.92874e+07 0 0.199628 0.994307 0.766717 5.8817e+07 0.00345724 1.29618e+07 6.00034e+06 1.28826e+07 135 1.28685e+07 9.24475e+06 0.00305454 1.30897e+07 50.4261 0.00920967 0.996416 0 49.8468 GTEX-15DCD-0626-SM-7KUG7 1 C1 2 pieces; ~40% internal fat, some atrophy 8.7 Muscle Muscle - Skeletal 0011907 709 510 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.990453 254568 0.976623 0.993202 0.846581 22732 1 76 0.00277957 273 0 1.0669e+08 0.0230876 1.35752e+06 1.07421e+08 8.98177e+06 22750 5.30879e+07 0 0.130042 0.993202 0.840826 1.0669e+08 0.00286482 2.27248e+07 1.02691e+07 2.28984e+07 275 2.29903e+07 2.26643e+07 0.00282208 2.28923e+07 49.8931 0.0126374 0.995951 0 50.1902 GTEX-15DCD-0626-SM-CYKUG 1 C1 2 pieces; ~40% internal fat, some atrophy 8.7 Muscle Muscle - Skeletal 0011907 709 510 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 RIP-Seq GTEX-15DCD-1426-SM-CYKTW 1 C1 2 pieces; one piece contains ~20% of fibrovasular component with large vessels (outlined); some thick-walled vessels(rep. outlined) 8.3 Lung Lung 0008952 729 495 BP-50127 RNA Extraction from Paxgene-derived Lysate Plate Based 03/04/2014 RIP-Seq GTEX-15DCD-1626-SM-6AJBH 1 C1 6 pieces; mucosa partially autolyzed and sloughed; congestion 5.8 Esophagus Esophagus - Mucosa 0006920 730 496 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989058 230658 0.966494 0.991845 0.804131 22754 1 76 0.00209601 143 0 6.2156e+07 0.0333203 436724 6.2667e+07 4.3171e+06 22772 3.09152e+07 0 0.162363 0.991845 0.797573 6.2156e+07 0.00341392 1.37082e+07 1.02193e+07 1.38622e+07 156 1.38188e+07 9.88214e+06 0.00275311 1.39273e+07 50.1955 0.00696896 0.994633 0 50.2792 GTEX-15DCD-1726-SM-7KUN1 1 C1 6 pieces; target muscularis present, few pieces include portion of larger nerves 6.7 Esophagus Esophagus - Muscularis 0004648 732 494 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990831 317509 0.968653 0.992568 0.784137 25036 1 76 0.00356046 274 0 9.91913e+07 0.0311143 1.28754e+06 9.9934e+07 7.55592e+06 25071 4.93584e+07 0 0.184516 0.992568 0.778309 9.91913e+07 0.0042911 2.1416e+07 9.08958e+06 2.16379e+07 306 2.1662e+07 1.45228e+07 0.00392514 2.15588e+07 49.8806 0.0128839 0.994306 0 50.2577 GTEX-15DCD-2926-SM-7KULT 1 C1 4 pieces 6.5 Brain Brain - Cortex 0001870 758 476 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.990433 449159 0.954572 0.9929 0.815569 23074 1 76 0.00246622 130 0 5.84436e+07 0.0451443 2.33826e+06 5.88616e+07 3.6527e+06 23087 2.90583e+07 0 0.139003 0.9929 0.809779 5.84436e+07 0.00375172 1.26665e+07 1.56291e+07 1.28258e+07 163 1.28205e+07 6.67901e+06 0.00310737 1.2801e+07 49.962 0.0397247 0.995366 0 50.3124 GTEX-15DCD-3026-SM-6PALL 2 C1 1 piece; adenohypophysis 6.1 Pituitary Pituitary 0000007 759 476 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.972024 288615 0.964289 0.981742 0.792491 26753 1 76 0.00337812 373 0 1.10236e+08 0.0354866 3.37401e+06 1.12286e+08 1.27111e+07 26808 5.43904e+07 0 0.171799 0.981742 0.778022 1.10236e+08 0.00644757 2.38145e+07 1.45363e+07 2.39971e+07 368 2.44162e+07 1.31683e+07 0.00489765 2.44248e+07 50.0088 0.0300484 0.99146 0 50.1909 GTEX-15DCE-0003-SM-6RBJM B1 Blood Whole Blood 0013756 -110 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DCE-0003-SM-7DLFB B1 Blood Whole Blood 0013756 -110 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15DCE-0005-SM-7SB7J B1 9 Blood Whole Blood 0013756 -110 BP-48557 RNA isolation_PAXgene Blood RNA (Manual) 01/22/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.966698 1.28367e+06 0.942838 0.969186 0.734758 20266 1 76 0.0025832 140 0 1.126e+08 0.055975 268825 1.1618e+08 1.30655e+07 20279 5.59708e+07 0 0.20808 0.969186 0.712117 1.126e+08 0.0044489 2.52396e+07 1.84917e+08 2.54351e+07 170 2.55282e+07 2.61466e+07 0.00351365 2.54757e+07 49.9486 0.00231386 0.971674 0 50.1928 GTEX-15DCE-0008-SM-E6CPF B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 670 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992443 620365 0.982385 0.994428 0.870431 20580 1 76 0.00202752 182 0 8.83338e+07 0.0172609 420449 8.88288e+07 1.55831e+07 20598 4.39585e+07 0 0.111954 0.994428 0.865581 8.83338e+07 0.0030293 2.00924e+07 9.62884e+06 1.96603e+07 181 1.97386e+07 2.37942e+07 0.00252741 2.01888e+07 50.5637 0.00473325 0.996413 0 49.4565 GTEX-15DCE-0826-SM-7KULW 1 B1 2 pieces: smaller has 20% fibrofatty content 6.7 Heart Heart - Atrial Appendage 0006631 693 1122 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992329 274649 0.981989 0.99408 0.838289 22151 1 76 0.00363099 267 0 8.95082e+07 0.0177995 2.26023e+06 9.00412e+07 6.74403e+06 22169 4.45772e+07 0 0.1437 0.99408 0.833326 8.95082e+07 0.00423667 1.92102e+07 1.92902e+07 1.96856e+07 283 1.96733e+07 1.24065e+07 0.0039333 1.93411e+07 49.5743 0.0251021 0.995831 0 50.6111 GTEX-15DCE-1326-SM-6LPJL 1 B1 6 pieces; chronic inflammation and squamous hyperplasia consistent with reflux 7.2 Esophagus Esophagus - Mucosa 0006920 714 1101 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991941 217460 0.978508 0.994224 0.840699 22002 1 76 0.00260049 133 0 6.49133e+07 0.0211606 205829 6.52904e+07 1.08112e+07 22017 3.23253e+07 0 0.137809 0.994224 0.835843 6.49133e+07 0.00354705 1.47051e+07 8.96916e+06 1.46951e+07 142 1.47309e+07 1.37898e+07 0.00307268 1.48117e+07 50.1366 0.00315252 0.996508 0 49.9831 GTEX-15DCE-1526-SM-7KUFD 1 B1 6 pieces; up to 30% submucosa 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 718 1097 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989412 397062 0.97943 0.992737 0.877487 21842 1 76 0.00315635 211 0 8.09437e+07 0.0202846 586205 8.15359e+07 7.58073e+06 21857 4.02144e+07 0 0.101944 0.992737 0.871114 8.09437e+07 0.00320987 1.73963e+07 7.80992e+06 1.76064e+07 210 1.76724e+07 1.61049e+07 0.00318302 1.75784e+07 49.8666 0.00718953 0.996062 0 50.3001 GTEX-15DCE-1626-SM-6LPJM 1 B1 6 pieces; mucosa only present; muscularis missing 6.3 Stomach Stomach 0000945 720 1095 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990691 182841 0.977904 0.993281 0.826571 21831 1 76 0.00295671 210 0 6.65948e+07 0.0216201 1.50956e+06 6.70453e+07 1.00885e+07 21844 3.31432e+07 0 0.151333 0.993281 0.821018 6.65948e+07 0.00408996 1.50896e+07 3.36173e+07 1.49561e+07 185 1.49575e+07 9.89991e+06 0.00352186 1.52495e+07 50.4832 0.0225155 0.995871 0 49.7778 GTEX-15DCE-2026-SM-7KUFE 2 B1 6 pieces; 6.7 Colon Colon - Transverse 0001157 745 1070 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985579 325820 0.974709 0.990114 0.831776 23947 1 76 0.00324642 168 0 7.59602e+07 0.0242842 417001 7.67186e+07 6.65009e+06 23970 3.76697e+07 0 0.142933 0.990114 0.823553 7.59602e+07 0.00383308 1.66113e+07 8.09392e+06 1.67262e+07 177 1.68844e+07 1.38569e+07 0.00353841 1.67731e+07 49.8347 0.00543546 0.994648 0 50.1724 GTEX-15DCE-5004-SM-AN459 B1 Muscle Muscle - Skeletal 0011907 687 ChIP-Seq GTEX-15DCE-5007-SM-AN458 B1 Heart Heart - Left Ventricle 0006566 691 ChIP-Seq GTEX-15DCZ-0001-SM-6RBKW C1 Blood Whole Blood 0013756 581 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-5918,LCSET-6265 11/22/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DCZ-0426-SM-DLL4Q 0 C1 2 pieces, no adhrent fat or significant atherosis Blood Vessel Artery - Tibial 0007610 552 976 BP-50217 DNA Extraction from Paxgene-derived Lysate Plate Based 03/06/2014 LCSET-10443 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-15DCZ-0526-SM-686Z3 0 C1 2 pieces, ~5-10% interstitital fat, rep delineated 8.1 Muscle Muscle - Skeletal 0011907 554 975 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.991905 199022 0.980064 0.992547 0.844948 19983 1 76 0.00171833 163 0 7.76585e+07 0.0196751 1.38152e+06 7.82417e+07 4.16711e+06 19989 3.87056e+07 0 0.135116 0.992547 0.838651 7.76585e+07 0.00225574 1.66847e+07 8.24478e+06 1.67866e+07 192 1.67361e+07 1.54781e+07 0.00198686 1.67823e+07 50.069 0.0176571 0.993189 0 50.1523 GTEX-15DCZ-0626-SM-6AJ9I 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 556 976 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.989386 109739 0.974749 0.992164 0.738143 22738 1 76 0.00210902 148 0 6.47226e+07 0.0250719 1.101e+06 6.52338e+07 4.22141e+06 22766 3.21795e+07 0 0.236607 0.992164 0.732358 6.47226e+07 0.00343081 1.43689e+07 7.47968e+06 1.44572e+07 154 1.44344e+07 9.60761e+06 0.00276806 1.45694e+07 50.2328 0.0168777 0.994941 0 50.1531 GTEX-15DCZ-0726-SM-69LOV 1 C1 2 piecesm inactive lobular units, rep delineated; prominent stromal fibrosis 7 Breast Breast - Mammary Tissue 0008367 562 970 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.993038 138854 0.976543 0.99433 0.755733 24356 1 76 0.00199237 160 0 7.72169e+07 0.0230764 412292 7.76572e+07 4.77661e+06 24387 3.84461e+07 0 0.22081 0.99433 0.751448 7.72169e+07 0.00291547 1.7173e+07 8.49083e+06 1.72154e+07 168 1.71856e+07 1.40636e+07 0.00245332 1.73058e+07 50.1742 0.00530913 0.995621 0 50.0616 GTEX-15DCZ-0826-SM-6AJBB 1 C1 2 pieces, moderate congestion, acute pneumonia/pneumonitis/bronchitis 6.4 Lung Lung 0008952 571 961 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.990728 195455 0.978813 0.993226 0.7823 22026 1 76 0.00214509 137 0 6.76429e+07 0.0208936 350517 6.81042e+07 4.60603e+06 22046 3.36556e+07 0 0.196512 0.993226 0.777001 6.76429e+07 0.00321233 1.50474e+07 1.07205e+07 1.51977e+07 150 1.51998e+07 1.27289e+07 0.00267737 1.52101e+07 50.0169 0.00514677 0.995725 0 50.2484 GTEX-15DCZ-1126-SM-6871O 1 C1 2 pieces, minimal interstitial fibrosis/chronic ischemic damage 6.3 Heart Heart - Left Ventricle 0006566 585 949 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.990148 220906 0.982106 0.99102 0.850859 20937 1 76 0.00166562 369 0 1.14713e+08 0.0177851 1.34902e+07 1.15752e+08 6.15564e+06 20943 5.71917e+07 0 0.131248 0.99102 0.843218 1.14713e+08 0.00217409 2.54338e+07 3.91503e+07 2.5952e+07 360 2.57112e+07 9.62672e+06 0.00191963 2.57575e+07 50.045 0.116544 0.991893 0 50.5042 GTEX-15DCZ-1226-SM-6871P 1 C1 2 pieces, mild goiter, ~1mm colloid cyst 6.6 Thyroid Thyroid 0002046 586 948 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.986655 306640 0.962153 0.987501 0.766691 23242 1 76 0.00223766 162 0 7.76801e+07 0.0375849 989843 7.86633e+07 4.18238e+06 23269 3.8658e+07 0 0.195463 0.987501 0.757108 7.76801e+07 0.00289385 1.69871e+07 1.3389e+07 1.70708e+07 176 1.70146e+07 1.30047e+07 0.00256547 1.71142e+07 50.1459 0.0125833 0.988348 0 50.123 GTEX-15DCZ-1726-SM-69LPX 1 C1 2 pieces, ~10-15% fascia/vascular elements; rep delineated 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 593 945 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.992461 204009 0.974191 0.993729 0.78742 22544 1 76 0.00194113 163 0 7.55888e+07 0.0255303 655684 7.60657e+07 4.44743e+06 22575 3.76473e+07 0 0.186771 0.993729 0.782483 7.55888e+07 0.00275855 1.67864e+07 1.22089e+07 1.68563e+07 180 1.6838e+07 1.29334e+07 0.00234932 1.69025e+07 50.0957 0.00861996 0.994998 0 50.1039 GTEX-15DCZ-2226-SM-69LOB 1 C1 2 pieces, all myometrium 6.1 Uterus Uterus 0000995 611 930 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.992486 135049 0.967806 0.993769 0.78047 22132 1 76 0.00187452 167 0 7.41506e+07 0.0319889 741377 7.46155e+07 4.65693e+06 22153 3.69242e+07 0 0.187336 0.993769 0.775607 7.41506e+07 0.00274862 1.62662e+07 9.18122e+06 1.6348e+07 186 1.62767e+07 1.12056e+07 0.00231101 1.6438e+07 50.2466 0.00993597 0.995052 0 50.1254 GTEX-15DCZ-2326-SM-6AJB1 1 C1 6 pieces, squamous epithelium is ~0.1mm, early sloughing 7.1 Vagina Vagina 0000996 613 928 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.989316 190486 0.967059 0.991971 0.740026 22794 1 76 0.00215094 133 0 6.39146e+07 0.032746 372081 6.4432e+07 4.22093e+06 22821 3.17879e+07 0 0.227033 0.991971 0.734084 6.39146e+07 0.00340618 1.41025e+07 9.22538e+06 1.41984e+07 150 1.41925e+07 9.50724e+06 0.00277688 1.42753e+07 50.1454 0.00577479 0.994626 0 50.1693 GTEX-15DCZ-2426-SM-6871N 2 C1 6 pieces, squamous mucosa is ~0.1-0.2mm, moderate sloughing 7.3 Esophagus Esophagus - Mucosa 0006920 614 928 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5449 06/29/2014 TruSeq.v1 EXCLUDE 0.985572 281327 0.96645 0.986485 0.77853 22507 1 76 0.00224159 157 0 7.29538e+07 0.033356 692697 7.39533e+07 4.31922e+06 22527 3.62956e+07 0 0.18792 0.986485 0.768008 7.29538e+07 0.00291818 1.62470e+07 1.19947e+07 1.63004e+07 178 1.62336e+07 1.1104e+07 0.00257957 1.63879e+07 50.2364 0.00936668 0.987398 0 50.082 GTEX-15DCZ-2526-SM-69LOC 1 C1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 615 927 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.992225 172452 0.969667 0.993598 0.786602 23223 1 76 0.00186508 201 0 8.02222e+07 0.030126 1.77016e+06 8.07391e+07 4.60948e+06 23249 3.99399e+07 0 0.183065 0.993598 0.781566 8.02222e+07 0.0027607 1.77258e+07 9.38666e+06 1.77099e+07 221 1.76396e+07 1.11227e+07 0.00231227 1.79089e+07 50.3788 0.0219244 0.99497 0 49.9776 GTEX-15DCZ-2826-SM-6EU2J 1 C1 6 pieces, confirmed muscularis 5.8 Colon Colon - Sigmoid 0001159 620 924 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.988428 168524 0.968672 0.99004 0.800342 22534 1 76 0.00416505 153 0 7.1318e+07 0.0311418 1.74414e+06 7.20355e+07 7.1654e+06 22556 3.54763e+07 0 0.16833 0.99004 0.79237 7.1318e+07 0.00434886 1.56837e+07 1.14469e+07 1.57624e+07 173 1.56942e+07 9.79322e+06 0.0042568 1.58685e+07 50.2761 0.0242123 0.991651 0 50.1251 GTEX-15DDE-0001-SM-6RBJO B1 Blood Whole Blood 0013756 581 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DDE-0001-SM-7DLFL B1 Blood Whole Blood 0013756 581 BP-48470 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/21/2014 LCSET-6363,LCSET-7187 05/08/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15DDE-0008-SM-E6CPH B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 628 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992387 787098 0.984302 0.994239 0.879239 20084 1 76 0.002072 229 0 9.8098e+07 0.0153509 265336 9.86664e+07 1.69595e+07 20098 4.88193e+07 0 0.105063 0.994239 0.874174 9.8098e+07 0.00306832 2.25104e+07 1.0332e+07 2.18728e+07 227 2.20109e+07 2.63673e+07 0.00256923 2.25479e+07 50.6026 0.00268922 0.996091 0 49.2817 GTEX-15DDE-0011-R10a-SM-7KUKW C1, B1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 594 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990837 707093 0.961372 0.993079 0.833378 22850 1 76 0.00474017 265 0 9.10509e+07 0.0384492 1.33538e+07 9.16855e+07 6.37503e+06 22865 4.52887e+07 0 0.127994 0.993079 0.82761 9.10509e+07 0.00581185 1.93362e+07 3.13851e+07 1.9911e+07 321 1.97924e+07 6.6225e+06 0.0052748 1.96107e+07 49.7694 0.145647 0.99532 0 50.7323 GTEX-15DDE-0011-R10a-SM-7KULA C1, B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 594 BP-50740 RNA isolation_PAXgene Tissue miRNA 03/21/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.991031 494158 0.964329 0.993225 0.846154 22230 1 76 0.00462914 198 0 7.82178e+07 0.0354759 1.12308e+07 7.87514e+07 5.56132e+06 22243 3.89145e+07 0 0.118175 0.993225 0.840421 7.82178e+07 0.00571666 1.67038e+07 2.17759e+07 1.71813e+07 237 1.70319e+07 6.28519e+06 0.0051717 1.69786e+07 49.9216 0.142611 0.995418 0 50.7047 GTEX-15DDE-0011-R10a-SM-AHZN2 C1, B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 594 ChIP-Seq GTEX-15DDE-0011-R11b-SM-6LPIF C1, B1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 594 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.991282 233844 0.948534 0.993558 0.752367 21474 1 76 0.00306294 125 0 6.02364e+07 0.0510929 1.32761e+06 6.06269e+07 8.91351e+06 21495 2.99751e+07 0 0.196168 0.993558 0.747519 6.02364e+07 0.00407027 1.30724e+07 1.14734e+07 1.30489e+07 139 1.30715e+07 6.96697e+06 0.00356545 1.31743e+07 50.1958 0.0218981 0.995833 0 49.955 GTEX-15DDE-0011-R4b-SM-7KULI C1, B1, A1 6.8 Brain Brain - Amygdala 0001876 594 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990238 479452 0.969848 0.992764 0.852621 21075 1 76 0.00511711 200 0 8.04992e+07 0.0299462 1.49775e+07 8.1086e+07 5.92807e+06 21086 4.00361e+07 0 0.117227 0.992764 0.846451 8.04992e+07 0.00631349 1.72019e+07 3.12381e+07 1.77239e+07 240 1.75535e+07 5.99879e+06 0.00571378 1.75122e+07 49.9412 0.184711 0.995289 0 50.7473 GTEX-15DDE-0011-R5b-SM-7KULJ C1, B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 594 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990977 577885 0.964381 0.993123 0.822307 23223 1 76 0.00473448 269 0 9.41433e+07 0.0354168 1.12758e+07 9.47952e+07 7.12874e+06 23243 4.68526e+07 0 0.142074 0.993123 0.816652 9.41433e+07 0.00554431 2.0138e+07 3.40312e+07 2.07491e+07 305 2.06333e+07 8.75214e+06 0.00513852 2.0408e+07 49.7254 0.118949 0.995269 0 50.7473 GTEX-15DDE-0011-R9b-SM-6M46U C1, B1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 594 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.985038 224153 0.961866 0.986579 0.839757 21677 1 76 0.00365963 131 0 5.56828e+07 0.0378939 5.83915e+06 5.64403e+07 7.37775e+06 21690 2.77415e+07 0 0.122108 0.986579 0.828487 5.56828e+07 0.00469837 1.22383e+07 1.21383e+07 1.2331e+07 149 1.22143e+07 5.18086e+06 0.00417819 1.24356e+07 50.4489 0.103457 0.988121 0 50.1887 GTEX-15DDE-0126-SM-6LPKH 0 C1 6 pieces, trace dermal fat. Squamous epithelium is ~50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 628 744 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992743 90550 0.976017 0.994856 0.83255 22200 1 76 0.00280097 162 0 5.78478e+07 0.0236863 194421 5.81469e+07 9.22265e+06 22218 2.88075e+07 0 0.143467 0.994856 0.828268 5.78478e+07 0.00373793 1.25891e+07 5.87221e+06 1.25389e+07 133 1.25362e+07 1.12083e+07 0.00326846 1.27048e+07 50.3339 0.00334362 0.99697 0 49.9002 GTEX-15DDE-0226-SM-6LLJ6 0 C1 2 pieces, minimal fascia/vascular elements 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 630 742 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979712 176452 0.972753 0.986747 0.774911 23691 1 76 0.00283813 211 0 8.93604e+07 0.0269095 358967 9.05606e+07 7.92127e+06 23733 4.42302e+07 0 0.197842 0.986747 0.76464 8.93604e+07 0.00412855 1.9516e+07 8.8644e+06 1.94687e+07 212 1.96728e+07 1.42905e+07 0.00347874 1.99116e+07 50.3016 0.00396383 0.993781 0 49.9393 GTEX-15DDE-0326-SM-6LLJ5 0 C1 2 pieces partial rims of fat, up to ~0.5mm 7.2 Nerve Nerve - Tibial 0001323 631 742 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976845 165956 0.964564 0.985224 0.706521 24491 1 76 0.00272062 182 0 8.42062e+07 0.0351791 303184 8.54691e+07 7.29354e+06 24535 4.16053e+07 0 0.258043 0.985224 0.696081 8.42062e+07 0.00409683 1.84444e+07 7.73866e+06 1.83648e+07 175 1.85953e+07 1.19856e+07 0.00340287 1.89081e+07 50.417 0.00354729 0.993603 0 49.8919 GTEX-15DDE-0426-SM-6M48M 0 C1 2 pieces, no atherosis or adherent fat. 7.1 Blood Vessel Artery - Tibial 0007610 633 740 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992912 97953 0.970318 0.994509 0.804916 20692 1 76 0.0026673 128 0 5.8557e+07 0.0293913 359405 5.88803e+07 7.95877e+06 20711 2.91693e+07 0 0.165402 0.994509 0.800496 5.8557e+07 0.00380205 1.26099e+07 4.86132e+06 1.26347e+07 135 1.2601e+07 1.02459e+07 0.00323376 1.27332e+07 50.2607 0.00610399 0.996106 0 50.049 GTEX-15DDE-0526-SM-6ETZQ 0 C1 2 pieces, interstitial fat/vascular elements is ~10% total tissue 8.1 Muscle Muscle - Skeletal 0011907 635 738 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.99322 197398 0.980797 0.994529 0.872625 19717 1 76 0.00438882 134 0 7.96057e+07 0.0190093 2.02596e+06 8.00437e+07 7.71864e+06 19726 3.96735e+07 0 0.108172 0.994529 0.86785 7.96057e+07 0.0043796 1.73327e+07 8.68492e+06 1.73125e+07 165 1.73047e+07 1.68153e+07 0.00438422 1.7443e+07 50.199 0.0253107 0.995837 0 49.9709 GTEX-15DDE-0526-SM-CYKOF 0 C1 2 pieces, interstitial fat/vascular elements is ~10% total tissue 8.1 Muscle Muscle - Skeletal 0011907 635 738 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 RIP-Seq GTEX-15DDE-0626-SM-69LOK 1 C1 2 pieces, mild goitre 6.5 Thyroid Thyroid 0002046 644 730 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.992523 184652 0.960832 0.993865 0.751987 23752 1 76 0.00210595 169 0 8.44112e+07 0.0389081 1.10235e+06 8.49323e+07 4.8059e+06 23785 4.20485e+07 0 0.208845 0.993865 0.747373 8.44112e+07 0.00301427 1.84266e+07 1.16743e+07 1.84607e+07 189 1.84335e+07 1.36299e+07 0.0025595 1.85623e+07 50.174 0.0129791 0.995206 0 50.0462 GTEX-15DDE-1126-SM-6LLHN 1 C1 2 pieces, mild-moderate interstitial fibrosis/chronic ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 654 722 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976341 227439 0.980222 0.985939 0.849308 21203 1 76 0.00384149 370 0 1.08368e+08 0.0196627 9.9566e+06 1.09914e+08 9.54712e+06 21218 5.35545e+07 0 0.130914 0.985939 0.837366 1.08368e+08 0.00539679 2.36762e+07 2.46672e+07 2.37832e+07 332 2.40514e+07 1.17647e+07 0.00461157 2.43323e+07 50.2903 0.0905857 0.995537 0 50.1127 GTEX-15DDE-1126-SM-CYKRM 1 C1 2 pieces, mild-moderate interstitial fibrosis/chronic ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 654 722 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 RIP-Seq GTEX-15DDE-1226-SM-6PAN8 1 C1 2 pieces, no significant atherosis, nubbins of fat up to ~0.8mm 6.8 Blood Vessel Artery - Coronary 0001621 658 718 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977023 198384 0.970246 0.985619 0.8067 22833 1 76 0.00344475 215 0 9.47196e+07 0.0294857 305646 9.61016e+07 1.14603e+07 22854 4.67957e+07 0 0.163546 0.985619 0.795099 9.47196e+07 0.00620139 2.06199e+07 1.6618e+07 2.05924e+07 225 2.09023e+07 1.63138e+07 0.00481105 2.11025e+07 50.2383 0.00318045 0.994216 0 49.9666 GTEX-15DDE-1326-SM-6LLJM 1 C1 6 pieces, mild atherosis up to ~0.4mm 5.9 Blood Vessel Artery - Aorta 0001496 659 718 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.968506 176414 0.972022 0.978094 0.781212 22098 1 76 0.00282065 149 0 7.27812e+07 0.0276217 417848 7.44113e+07 6.78748e+06 22117 3.58903e+07 0 0.19081 0.978094 0.764099 7.27812e+07 0.00441315 1.59757e+07 1.39084e+07 1.58894e+07 159 1.61705e+07 1.29139e+07 0.00360909 1.63882e+07 50.3344 0.00561539 0.987683 0 49.8645 GTEX-15DDE-2326-SM-6AJA8 1 C1 2 pieces, post menopausal involution 6.6 Ovary Ovary 0000992 673 709 BP-49836 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991194 380402 0.945549 0.993701 0.723335 21490 1 76 0.00210876 137 0 6.64196e+07 0.0542566 652483 6.68406e+07 4.66771e+06 21515 3.30603e+07 0 0.222214 0.993701 0.718779 6.64196e+07 0.00329176 1.41954e+07 2.51191e+07 1.4473e+07 142 1.44711e+07 1.10813e+07 0.00269877 1.43665e+07 49.8186 0.00976177 0.996208 0 50.4841 GTEX-15DDE-2926-SM-6LLJ3 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~60 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 689 696 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.9668 208309 0.974907 0.97588 0.796315 23522 1 76 0.00295218 172 0 8.21724e+07 0.0248467 831324 8.42035e+07 7.28065e+06 23555 4.05781e+07 0 0.178592 0.97588 0.777108 8.21724e+07 0.00453572 1.7968e+07 9.68766e+06 1.79277e+07 182 1.81998e+07 1.38401e+07 0.00373658 1.84305e+07 50.3148 0.0098728 0.984959 0 49.9438 GTEX-15DDE-3026-SM-6AJ9C 1 C1 4 pieces, no abnormalities 6.9 Brain Brain - Cerebellum 0002037 695 690 BP-51592 RNA Extraction from Paxgene-derived Lysate Plate Based 04/15/2014 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.989661 492361 0.934834 0.992308 0.718242 22643 1 76 0.00260714 157 0 7.38603e+07 0.0648711 1.75015e+06 7.44329e+07 5.19968e+06 22666 3.67237e+07 0 0.216592 0.992308 0.712717 7.38603e+07 0.0037923 1.57501e+07 2.37475e+07 1.59004e+07 183 1.58893e+07 7.05703e+06 0.00319814 1.59486e+07 50.0931 0.0235132 0.994956 0 50.2375 GTEX-15DDE-3226-SM-6LPK6 1 C1 2 pieces, 50% neurohypophysis, delineated; rest adenohypophysis. 6.7 Pituitary Pituitary 0000007 697 689 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991152 151784 0.9586 0.993629 0.74719 23949 1 76 0.00303889 116 0 6.36862e+07 0.0412112 1.33082e+06 6.40945e+07 1.02237e+07 23978 3.17017e+07 0 0.21141 0.993629 0.74243 6.36862e+07 0.00414839 1.35976e+07 9.05941e+06 1.3613e+07 138 1.36206e+07 8.95841e+06 0.00359226 1.37341e+07 50.2075 0.0207633 0.996107 0 50.0283 GTEX-15DYW-0002-SM-6RBJG C1 Blood Whole Blood 0013756 413 BP-48628 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DYW-0002-SM-7DLFW C1 Blood Whole Blood 0013756 413 BP-48628 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15DYW-0006-SM-7RHFR C1 7.5 Blood Whole Blood 0013756 413 BP-48663 RNA isolation_PAXgene Blood RNA (Manual) 01/24/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.982536 280363 0.980098 0.985151 0.815418 20251 1 76 0.00262905 157 0 9.02117e+07 0.0194221 465272 9.15715e+07 9.26121e+06 20264 4.48864e+07 0 0.16468 0.985151 0.80331 9.02117e+07 0.0043594 2.06231e+07 7.26511e+07 2.07556e+07 177 2.08091e+07 1.98919e+07 0.00349193 2.08105e+07 50.0017 0.00508097 0.987766 0 50.16 GTEX-15DYW-0008-SM-E76Q4 C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 494 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994186 702742 0.983777 0.995531 0.878091 20795 1 76 0.00153887 291 0 1.11655e+08 0.0158811 370661 1.12156e+08 6.82734e+06 20810 5.56302e+07 0 0.105686 0.995531 0.874167 1.11655e+08 0.00228488 2.52047e+07 1.05761e+07 2.52628e+07 307 2.5439e+07 3.03399e+07 0.00191137 2.51703e+07 49.7346 0.00330486 0.996876 0 50.0575 GTEX-15DYW-0011-R10a-SM-AHZNE C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 427 ChIP-Seq GTEX-15DYW-0011-R10a-SM-CYKSJ C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 427 BP-51563 RNA isolation_PAXgene Tissue miRNA 04/14/2014 RIP-Seq GTEX-15DYW-0011-R11a-SM-6LPIT C1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 427 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990713 366412 0.943036 0.99287 0.734523 22603 1 76 0.00281556 105 0 5.48088e+07 0.0564597 860484 5.52023e+07 8.51449e+06 22624 2.72759e+07 0 0.208513 0.99287 0.729286 5.48088e+07 0.00366498 1.18521e+07 1.10727e+07 1.17609e+07 122 1.17844e+07 6.99495e+06 0.00323935 1.19383e+07 50.3243 0.0155878 0.995028 0 49.8068 GTEX-15DYW-0011-R2b-SM-7KUKY C1, A1 7.3 Brain Brain - Substantia nigra 0002038 427 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991413 826573 0.95945 0.993408 0.818838 24443 1 76 0.00313569 375 0 1.01184e+08 0.0403562 8.44693e+06 1.01855e+08 6.79994e+06 24468 5.03627e+07 0 0.140612 0.993408 0.813441 1.01184e+08 0.00425232 2.18622e+07 3.38255e+07 2.22173e+07 344 2.21711e+07 8.90703e+06 0.00369289 2.2082e+07 49.8994 0.082931 0.995404 0 50.4028 GTEX-15DYW-0011-R3b-SM-6LPIM C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 427 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992834 383518 0.957372 0.995089 0.838075 21654 1 76 0.00245427 119 0 5.15817e+07 0.0423612 3.8859e+06 5.18362e+07 7.84838e+06 21665 2.56914e+07 0 0.119297 0.995089 0.833959 5.15817e+07 0.0034348 1.13271e+07 1.61291e+07 1.12835e+07 151 1.1175e+07 4.50086e+06 0.00294342 1.15493e+07 50.8235 0.074965 0.997344 0 49.9034 GTEX-15DYW-0011-R4a-SM-6M46V C1, A1 8 Brain Brain - Amygdala 0001876 427 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994157 675035 0.949412 0.995628 0.822295 23182 1 76 0.00231595 155 0 6.74984e+07 0.0501681 3.86103e+06 6.77948e+07 9.18744e+06 23205 3.36409e+07 0 0.127118 0.995628 0.8187 6.74984e+07 0.00323213 1.46462e+07 2.26992e+07 1.47057e+07 199 1.46637e+07 7.93567e+06 0.00277336 1.47899e+07 50.2143 0.0569517 0.997099 0 50.1013 GTEX-15DYW-0011-R5a-SM-6M46W C1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 427 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994301 437407 0.954197 0.995781 0.813747 23240 1 76 0.00238045 196 0 6.77242e+07 0.0455001 3.29388e+06 6.80111e+07 9.15695e+06 23258 3.37593e+07 0 0.14045 0.995781 0.810314 6.77242e+07 0.00334282 1.47478e+07 1.91318e+07 1.46873e+07 213 1.4636e+07 7.2335e+06 0.00286092 1.48991e+07 50.4455 0.0484315 0.997262 0 49.8973 GTEX-15DYW-0011-R6b-SM-6PALA C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 427 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980728 1.01127e+06 0.954648 0.988362 0.831788 25204 1 76 0.00317266 372 0 1.14275e+08 0.0450437 6.72204e+06 1.15621e+08 1.37973e+07 25229 5.65672e+07 0 0.12286 0.988362 0.822108 1.14275e+08 0.00554852 2.47613e+07 3.0694e+07 2.48312e+07 351 2.5071e+07 1.2564e+07 0.00435141 2.53343e+07 50.2612 0.0581387 0.995996 0 50.0705 GTEX-15DYW-0011-R7a-SM-7KULG C1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 427 BP-50740 RNA isolation_PAXgene Tissue miRNA 03/21/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989228 1.36349e+06 0.951356 0.99176 0.801302 23926 1 76 0.00310473 371 0 1.11482e+08 0.0484853 1.0092e+07 1.12408e+08 7.48858e+06 23947 5.54407e+07 0 0.150054 0.99176 0.794699 1.11482e+08 0.00454246 2.34765e+07 6.00852e+07 2.40558e+07 364 2.37923e+07 8.37043e+06 0.00382176 2.39747e+07 50.191 0.0897806 0.994291 0 50.6094 GTEX-15DYW-0011-R9b-SM-6PALB C1, A1 8 Brain Brain - Spinal cord (cervical c-1) 0006469 427 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979012 435688 0.954765 0.987269 0.789326 23283 1 76 0.00319189 139 0 5.93767e+07 0.0448609 1.28821e+06 6.01424e+07 6.88507e+06 23308 2.93594e+07 0 0.165439 0.987269 0.779277 5.93767e+07 0.00580706 1.30217e+07 1.10972e+07 1.30397e+07 144 1.3206e+07 8.27146e+06 0.00448854 1.3341e+07 50.2542 0.0214194 0.995526 0 50.0346 GTEX-15DYW-0126-SM-7KULE 0 C1 6 pieces; 10% dermal fat; well trimmed 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 493 1239 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990759 368141 0.972496 0.992997 0.806931 24275 1 76 0.0034585 223 0 8.15749e+07 0.027192 259677 8.21502e+07 6.19669e+06 24306 4.05725e+07 0 0.165565 0.992997 0.80128 8.15749e+07 0.00468376 1.75969e+07 8.03652e+06 1.7699e+07 186 1.7792e+07 1.48934e+07 0.00406975 1.7679e+07 49.8407 0.003161 0.995236 0 50.1447 GTEX-15DYW-0326-SM-6PAN9 0 C1 2 pieces; <5% internal fat 6.9 Nerve Nerve - Tibial 0001323 498 1235 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980009 243044 0.970461 0.987371 0.787689 25255 1 76 0.0033061 291 0 1.08063e+08 0.0292006 437012 1.09445e+08 1.25483e+07 25298 5.34928e+07 0 0.182771 0.987371 0.777742 1.08063e+08 0.00573149 2.37599e+07 9.7211e+06 2.37285e+07 299 2.40801e+07 1.9103e+07 0.00450975 2.41892e+07 50.113 0.00399299 0.994732 0 49.967 GTEX-15DYW-1126-SM-6LPK5 1 C1 2 pieces; no lesions 6.7 Heart Heart - Left Ventricle 0006566 541 1197 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.993921 86304 0.985057 0.995815 0.857179 19044 1 76 0.00223763 264 0 6.33048e+07 0.0148798 3.92101e+06 6.35708e+07 8.68702e+06 19051 3.15574e+07 0 0.127878 0.995815 0.853592 6.33048e+07 0.00305655 1.39996e+07 2.18657e+07 1.3853e+07 258 1.35377e+07 3.96803e+06 0.00264632 1.44308e+07 51.5968 0.0616794 0.997709 0 49.7368 GTEX-15DYW-1226-SM-6PALV 1 C1 6pieces; thin plaques; well trimmed 7.4 Blood Vessel Artery - Aorta 0001496 542 1196 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.98195 230810 0.97489 0.988421 0.778622 23894 1 76 0.00336525 279 0 1.07998e+08 0.0246471 273281 1.09263e+08 1.25988e+07 23931 5.34838e+07 0 0.196267 0.988421 0.769607 1.07998e+08 0.00547408 2.34321e+07 9.14855e+06 2.33015e+07 278 2.36125e+07 1.94158e+07 0.00441276 2.37984e+07 50.1961 0.00250114 0.994892 0 49.8602 GTEX-15DYW-1326-SM-6LPIV 2 C1 2 pieces; moderate congestion; severe central atrophy 7 Liver Liver 0001114 545 1194 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992212 160179 0.97096 0.99441 0.783635 21824 1 76 0.00269709 121 0 6.08966e+07 0.0288821 793825 6.12389e+07 9.15604e+06 21846 3.03266e+07 0 0.187325 0.99441 0.779255 6.08966e+07 0.00369074 1.34093e+07 8.29292e+06 1.32886e+07 140 1.32729e+07 9.10282e+06 0.00319281 1.35458e+07 50.5087 0.0129628 0.996608 0 49.774 GTEX-15DYW-1426-SM-6LPIW 2 C1 2 pieces; moderate congestion 6 Spleen Spleen 0002106 546 1193 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990573 222538 0.949205 0.992733 0.677866 24300 1 76 0.00299282 119 0 6.52308e+07 0.0505755 325315 6.57083e+07 9.48771e+06 24340 3.24537e+07 0 0.271339 0.992733 0.67294 6.52308e+07 0.00388217 1.40887e+07 1.06753e+07 1.40644e+07 133 1.40488e+07 8.15846e+06 0.00343653 1.42394e+07 50.3369 0.0049509 0.994893 0 49.9568 GTEX-15DYW-1526-SM-7KUEP 0 C1 2 pieces; stroma <5% 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 548 1192 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987064 470458 0.974898 0.991202 0.798221 24655 1 76 0.00298617 278 0 9.31236e+07 0.0247995 698836 9.39502e+07 7.70442e+06 24683 4.62066e+07 0 0.176677 0.991202 0.791198 9.31236e+07 0.00368122 2.04765e+07 9.55298e+06 2.05824e+07 264 2.07984e+07 1.52954e+07 0.00333224 2.06234e+07 49.7887 0.00743836 0.99534 0 50.129 GTEX-15DYW-1626-SM-6LLI1 2 C1 2 pieces; well trimmed 6.7 Pancreas Pancreas 0001150 549 1191 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.97877 201559 0.981894 0.987028 0.849223 21281 1 76 0.00282718 117 0 1.06638e+08 0.017618 329744 1.08039e+08 9.87999e+06 21298 5.2754e+07 0 0.132671 0.987028 0.838207 1.06638e+08 0.00433249 2.45007e+07 4.22427e+07 2.48809e+07 143 2.51036e+07 3.48397e+07 0.00357354 2.51897e+07 50.0856 0.00305208 0.995285 0 50.385 GTEX-15DYW-1726-SM-7KUM5 1 C1 6 pieces; well dissected muscle 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 550 1191 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990471 360188 0.96916 0.99244 0.768549 24424 1 76 0.00344743 272 0 1.04886e+08 0.0306393 1.65974e+06 1.05685e+08 7.72385e+06 24469 5.21703e+07 0 0.200611 0.99244 0.762739 1.04886e+08 0.00465585 2.27495e+07 9.6579e+06 2.29557e+07 330 2.29692e+07 1.34774e+07 0.00405044 2.29256e+07 49.9524 0.0157046 0.994409 0 50.2257 GTEX-15DYW-1826-SM-6LPIY 0 C1 6 pieces; slight surface desquamation; moderate vascular congestion; well dissected 7.2 Esophagus Esophagus - Mucosa 0006920 551 1190 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992298 158066 0.976267 0.994324 0.791594 21866 1 76 0.00270953 127 0 6.17185e+07 0.0233368 493065 6.20708e+07 1.02196e+07 21879 3.07381e+07 0 0.184673 0.994324 0.787101 6.17185e+07 0.00351468 1.39031e+07 7.77502e+06 1.39023e+07 143 1.39066e+07 9.85374e+06 0.00311128 1.40201e+07 50.2031 0.00794359 0.99635 0 49.9985 GTEX-15DYW-1926-SM-6EU2K 1 C1 6 pieces; nerves in adventitia of 3 pieces comprise 10% [circled]; well dissected 6.6 Esophagus Esophagus - Muscularis 0004648 552 1190 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990206 221329 0.971679 0.991813 0.787326 23052 1 76 0.00422539 162 0 8.13352e+07 0.0281043 974026 8.20066e+07 8.02627e+06 23082 4.04821e+07 0 0.184353 0.991813 0.78088 8.13352e+07 0.00426274 1.75144e+07 7.05366e+06 1.76092e+07 187 1.75372e+07 1.17891e+07 0.00424403 1.77092e+07 50.244 0.0118774 0.993419 0 50.135 GTEX-15DYW-2026-SM-6AJBD 2 C1 6 pieces; no lesions 5.8 Kidney Kidney - Cortex 0001225 554 1188 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.989067 265212 0.971752 0.991373 0.788487 23042 1 76 0.00202905 265 0 7.84072e+07 0.028097 2.95502e+06 7.90895e+07 5.57069e+06 23056 3.90411e+07 0 0.183266 0.991373 0.781684 7.84072e+07 0.00296972 1.70105e+07 3.45218e+07 1.71448e+07 276 1.72204e+07 6.46989e+06 0.00249829 1.71084e+07 49.8368 0.0373629 0.993678 0 50.1966 GTEX-15DYW-2126-SM-6M47B 2 C1 2 fragmented pieces: 1 with 60% fat 7 Adrenal Gland Adrenal Gland 0002369 557 1186 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993554 309941 0.96315 0.994995 0.759413 22400 1 76 0.00250967 132 0 6.57451e+07 0.0366008 1.32045e+06 6.60758e+07 9.01789e+06 22427 3.27677e+07 0 0.203737 0.994995 0.755613 6.57451e+07 0.00343553 1.42725e+07 1.39807e+07 1.4332e+07 151 1.43358e+07 9.13962e+06 0.00297193 1.43595e+07 50.0413 0.0199839 0.996436 0 50.1041 GTEX-15DYW-2226-SM-6LPJ8 2 C1 6 pieces; chronic atrophic gastritis with 60% reduction of gastric glands and replacement by chronic inflammatory cells; mucosa not useable, but other layers intact and without lesions 7.7 Stomach Stomach 0000945 558 1185 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.983032 181504 0.972835 0.985402 0.751777 23218 1 76 0.00367625 127 0 5.55916e+07 0.0245345 427160 5.64151e+07 8.89292e+06 23243 2.75602e+07 0 0.221058 0.985402 0.740803 5.55916e+07 0.00465829 1.24326e+07 9.41044e+06 1.23807e+07 121 1.2413e+07 8.66705e+06 0.00416609 1.25294e+07 50.2333 0.00757173 0.987773 0 49.8955 GTEX-15DYW-2326-SM-6PAMU 3 C1 6 pieces; mucosa largely autolyzed; muscularis intact (1) 5.8 Colon Colon - Transverse 0001157 559 1185 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.970478 199806 0.967187 0.979726 0.805517 25409 1 76 0.00456989 212 0 9.66027e+07 0.0276063 666994 9.86017e+07 1.12526e+07 25443 4.74152e+07 0 0.16167 0.979726 0.789186 9.66027e+07 0.00745882 2.10231e+07 1.54941e+07 2.09184e+07 231 2.13362e+07 1.51439e+07 0.00600072 2.14832e+07 50.1716 0.00676453 0.988975 0 49.8752 GTEX-15DYW-2426-SM-7KUG8 1 C1 6 pieces; well dissected muscularis 7.1 Colon Colon - Sigmoid 0001159 561 1183 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989238 367106 0.97196 0.992517 0.819823 22661 1 76 0.00292453 204 0 8.22402e+07 0.0277869 688986 8.28602e+07 7.08629e+06 22679 4.08483e+07 0 0.152137 0.992517 0.813688 8.22402e+07 0.00351471 1.74324e+07 7.36407e+06 1.76526e+07 208 1.77356e+07 1.44206e+07 0.00321865 1.75992e+07 49.807 0.00831504 0.995795 0 50.3138 GTEX-15DYW-2626-SM-6LPK7 1 C1 2 pieces; numerous corpora albicantia, 40% of area 7.2 Ovary Ovary 0000992 566 1180 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991215 231710 0.958416 0.99335 0.688903 22732 1 76 0.0027746 116 0 5.89219e+07 0.0413605 80591 5.93164e+07 9.41048e+06 22767 2.93341e+07 0 0.269513 0.99335 0.684322 5.89219e+07 0.0035089 1.28278e+07 9.99113e+06 1.28441e+07 113 1.28604e+07 9.69968e+06 0.00314096 1.29309e+07 50.1366 0.00135866 0.995484 0 50.0317 GTEX-15DYW-2726-SM-6EU2I 1 C1 6 pieces; up too 30% dermal fat 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 566 1181 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.990179 211448 0.974315 0.99188 0.836286 22380 1 76 0.00415365 139 0 6.16811e+07 0.0254948 223855 6.21861e+07 6.04213e+06 22394 3.06953e+07 0 0.138029 0.99188 0.829495 6.16811e+07 0.00439845 1.35246e+07 6.47594e+06 1.35525e+07 143 1.35028e+07 1.08945e+07 0.00427584 1.36805e+07 50.327 0.00359976 0.99358 0 50.0515 GTEX-15DYW-2926-SM-6PANA 2 C1 6 pieces; 3 with largely sloughed mucosa, 3 with outer wall and 30% fat 7 Vagina Vagina 0000996 570 1179 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979526 267781 0.967025 0.986952 0.711633 26329 1 76 0.00351203 220 0 1.10559e+08 0.0326244 219169 1.12021e+08 1.29333e+07 26387 5.46845e+07 0 0.255391 0.986952 0.702348 1.10559e+08 0.00587598 2.4293e+07 1.12305e+07 2.41645e+07 239 2.45302e+07 1.76146e+07 0.00468511 2.47415e+07 50.2144 0.0019565 0.994378 0 49.8674 GTEX-15DYW-3026-SM-7KFRM 1 C1 4 pieces 7.3 Brain Brain - Cerebellum 0002037 586 1164 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991639 632861 0.93721 0.993238 0.711925 24142 1 76 0.00297955 130 0 7.18203e+07 0.0624824 1.2584e+06 7.23092e+07 5.3455e+06 24175 3.57304e+07 0 0.225285 0.993238 0.707111 7.18203e+07 0.00312928 1.52979e+07 2.0494e+07 1.55371e+07 162 1.55791e+07 8.53954e+06 0.0030543 1.53647e+07 49.6536 0.0174031 0.994837 0 50.3879 GTEX-15DZA-0004-SM-6RBJI B1 Blood Whole Blood 0013756 -258 BP-48628 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15DZA-0004-SM-7DLFX B1 Blood Whole Blood 0013756 -258 BP-48628 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15DZA-0005-SM-9JGFP B1 5.6 Blood Whole Blood 0013756 -258 BP-48809 RNA isolation_PAXgene Blood RNA (Manual) 01/28/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.980517 709996 0.964338 0.981551 0.81583 20181 1 76 0.002314 374 0 1.24748e+08 0.0349692 515156 1.27093e+08 6.24416e+06 20194 6.21494e+07 0 0.148508 0.981551 0.800779 1.24748e+08 0.00358265 2.77256e+07 1.08144e+08 2.80868e+07 337 2.80053e+07 2.60877e+07 0.00294766 2.79411e+07 49.9426 0.00405338 0.982586 0 50.3236 GTEX-15DZA-0008-SM-E76Q2 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 255 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993893 739894 0.979985 0.995244 0.852234 21530 1 76 0.00167337 286 0 1.1537e+08 0.0196683 489011 1.15921e+08 7.58102e+06 21561 5.74779e+07 0 0.127752 0.995244 0.84818 1.1537e+08 0.002267 2.59187e+07 1.20541e+07 2.60276e+07 305 2.61704e+07 3.00758e+07 0.00196978 2.59291e+07 49.7683 0.00421847 0.996594 0 50.1048 GTEX-15DZA-0126-SM-6PAMV 1 B1 2 pieces, no abnormalities 6.5 Spleen Spleen 0002106 180 859 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.969412 263743 0.96517 0.980362 0.799046 24804 1 76 0.00459832 206 0 1.01181e+08 0.0312644 683954 1.03208e+08 1.29553e+07 24839 4.96911e+07 0 0.166123 0.980362 0.783355 1.01181e+08 0.00790022 2.22777e+07 2.0167e+07 2.2253e+07 241 2.27877e+07 1.4751e+07 0.00623083 2.2849e+07 50.0671 0.00662697 0.991312 0 49.9723 GTEX-15DZA-0226-SM-7KFS6 1 B1 2 pieces, no abnormalities, one section with nubbin of adherenat fat/vascular elements up to ~1mm, delineated 6.5 Thyroid Thyroid 0002046 179 860 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990357 254900 0.969061 0.992771 0.79535 24603 1 76 0.00311493 208 0 8.67484e+07 0.0303672 276055 8.73801e+07 6.86421e+06 24635 4.31333e+07 0 0.173711 0.992771 0.7896 8.67484e+07 0.00313223 1.88936e+07 9.16677e+06 1.91906e+07 232 1.92305e+07 1.33242e+07 0.00312356 1.90519e+07 49.7668 0.00315924 0.995185 0 50.3899 GTEX-15DZA-0526-SM-6LPKE 1 B1 6 pieces target muscularis 6.8 Esophagus Esophagus - Muscularis 0004648 213 826 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.993049 115480 0.975283 0.994796 0.826051 21964 1 76 0.00262253 164 0 7.18696e+07 0.0244786 705347 7.22456e+07 1.04172e+07 21982 3.58091e+07 0 0.149233 0.994796 0.821752 7.18696e+07 0.00328562 1.56097e+07 8.23725e+06 1.56214e+07 193 1.54871e+07 1.11134e+07 0.00295349 1.58589e+07 50.5931 0.00976319 0.996543 0 50.0187 GTEX-15DZA-0626-SM-6PANC 1 B1 2 pieces, minimal vascular / fascia elements 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 206 833 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977808 285115 0.97641 0.986673 0.823742 23828 1 76 0.00330242 280 0 1.02797e+08 0.0233223 757502 1.04186e+08 1.1773e+07 23854 5.08128e+07 0 0.152669 0.986673 0.812764 1.02797e+08 0.00609008 2.26055e+07 9.63455e+06 2.25918e+07 303 2.29186e+07 1.68535e+07 0.00468373 2.31485e+07 50.2495 0.00727069 0.995538 0 49.9848 GTEX-15DZA-0826-SM-6AJBF 3 B1 6 pieces, ~target lymphoid aggregates are ~5-10% tissue, best sampled by LCM 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 218 821 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.990486 151231 0.96552 0.992872 0.758743 24408 1 76 0.00226976 150 0 7.09759e+07 0.0341136 327014 7.14855e+07 4.83164e+06 24438 3.53218e+07 0 0.206777 0.992872 0.753334 7.09759e+07 0.00335173 1.55372e+07 8.36004e+06 1.56554e+07 165 1.56064e+07 1.00843e+07 0.00280944 1.57449e+07 50.2209 0.00457455 0.995257 0 50.1894 GTEX-15DZA-0926-SM-69LQ3 1 B1 6 pieces, mucosa up to ~0.5mm, ~15-20% thickness, much is sloughed/dendued 6.7 Colon Colon - Transverse 0001157 208 831 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 RNASEQ 0.993203 163247 0.975517 0.994395 0.815814 21973 1 76 0.00198636 167 0 7.59991e+07 0.0242811 591362 7.64275e+07 4.56236e+06 21987 3.78808e+07 0 0.159702 0.994395 0.811242 7.59991e+07 0.0027518 1.65668e+07 7.19464e+06 1.67329e+07 201 1.65971e+07 1.14546e+07 0.00236862 1.67932e+07 50.2936 0.00773755 0.995587 0 50.2494 GTEX-15DZA-1026-SM-6PAND 1 B1 6 pieces, target muscularis, trace mucosa, delineated 6.1 Colon Colon - Sigmoid 0001159 219 820 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981405 169369 0.974688 0.98862 0.816013 23788 1 76 0.00331259 218 0 9.21886e+07 0.0250551 833008 9.32498e+07 1.10376e+07 23813 4.56467e+07 0 0.158675 0.98862 0.806727 9.21886e+07 0.00561412 2.00699e+07 8.8277e+06 2.01074e+07 253 2.02959e+07 1.42421e+07 0.00445496 2.05116e+07 50.2643 0.00893308 0.995836 0 50.0466 GTEX-15DZA-1126-SM-6LPK8 3 B1 6 pieces, mucosa totally sloughed/denuded 5.9 Stomach Stomach 0000945 222 817 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991134 136339 0.980654 0.993374 0.848931 21150 1 76 0.00282769 217 0 6.46942e+07 0.0191432 1.06843e+06 6.51258e+07 9.996e+06 21164 3.22278e+07 0 0.131723 0.993374 0.843306 6.46942e+07 0.00379104 1.46291e+07 3.32883e+07 1.47475e+07 184 1.46558e+07 1.05431e+07 0.00330828 1.48552e+07 50.3378 0.0164056 0.995614 0 50.2014 GTEX-15DZA-1226-SM-7KFS1 1 B1 6 pieces, atherosis up to ~0.2mm 5.7 Blood Vessel Artery - Aorta 0001496 218 821 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993236 188279 0.974692 0.99434 0.829174 21945 1 76 0.00299232 163 0 7.84373e+07 0.0249814 267866 7.88838e+07 6.18438e+06 21969 3.90533e+07 0 0.145518 0.99434 0.824481 7.84373e+07 0.00278716 1.68353e+07 7.06096e+06 1.71608e+07 195 1.71051e+07 1.38907e+07 0.00288986 1.69762e+07 49.8109 0.00339571 0.995444 0 50.4788 GTEX-15DZA-1326-SM-68722 1 B1 2 pieces, myometrium; minute(~1mm)nodule of endometrial stroma, delineated 5.7 Uterus Uterus 0000995 224 815 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.992769 305770 0.965784 0.993413 0.745114 25917 1 76 0.00208956 275 0 1.09292e+08 0.0339637 226917 1.10016e+08 6.0909e+06 25973 5.44755e+07 0 0.220671 0.993413 0.740205 1.09292e+08 0.00257465 2.40298e+07 1.17865e+07 2.41638e+07 292 2.408e+07 1.75317e+07 0.00233195 2.41848e+07 50.1086 0.00206257 0.994056 0 50.1391 GTEX-15DZA-2026-SM-6PANE 0 B1 3 pieces, adherent interstitial fat is ~10% tissue 8.6 Muscle Muscle - Skeletal 0011907 250 789 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.985612 238607 0.983398 0.991195 0.873726 21392 1 76 0.00314129 288 0 1.22764e+08 0.016319 854926 1.23854e+08 1.5186e+07 21405 6.09291e+07 0 0.109672 0.991195 0.866033 1.22764e+08 0.00496866 2.63536e+07 1.28306e+07 2.63695e+07 322 2.66014e+07 2.61536e+07 0.00404983 2.67713e+07 50.1592 0.00690267 0.996778 0 50.0151 GTEX-15DZA-2226-SM-7KUMY 0 B1 2 pieces, no adherent fat or atherosis 7.5 Blood Vessel Artery - Tibial 0007610 254 785 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992856 289365 0.976371 0.994432 0.843016 22576 1 76 0.0032174 281 0 9.3525e+07 0.023187 362261 9.40487e+07 6.46477e+06 22597 4.6556e+07 0 0.133355 0.994432 0.838322 9.3525e+07 0.00427474 2.0262e+07 7.13802e+06 2.03844e+07 265 2.04101e+07 1.79943e+07 0.00374523 2.03775e+07 49.9601 0.00385184 0.996008 0 50.1506 GTEX-15EO6-0004-SM-6RBJH C1 Blood Whole Blood 0013756 1361 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15EO6-0004-SM-7DLGJ C1 Blood Whole Blood 0013756 1361 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15EO6-0005-SM-7PBZC C1 6.7 Blood Whole Blood 0013756 1361 BP-48809 RNA isolation_PAXgene Blood RNA (Manual) 01/28/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.942305 236085 0.987999 0.945031 0.815192 15195 1 76 0.00280687 100 0 1.00421e+08 0.0104016 156201 1.06262e+08 1.31743e+07 15195 4.99168e+07 0 0.172807 0.945031 0.770382 1.00421e+08 0.00530138 2.44311e+07 2.06251e+08 2.42776e+07 147 2.43507e+07 2.94002e+07 0.00405053 2.46741e+07 50.3298 0.00146996 0.947756 0 49.8424 GTEX-15EO6-0008-SM-E6CPJ C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1395 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992446 780624 0.979026 0.99424 0.854911 21577 1 76 0.00194951 292 0 1.05218e+08 0.0206178 536909 1.05828e+08 1.6771e+07 21600 5.23731e+07 0 0.124115 0.99424 0.849986 1.05218e+08 0.00269237 2.38745e+07 1.39174e+07 2.32806e+07 267 2.33745e+07 2.73989e+07 0.00232027 2.39676e+07 50.6264 0.00507342 0.996033 0 49.3703 GTEX-15EO6-0011-R10a-SM-AHZMY C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1375 ChIP-Seq GTEX-15EO6-0011-R10a-SM-CYKSK C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 1375 BP-51563 RNA isolation_PAXgene Tissue miRNA 04/14/2014 RIP-Seq GTEX-15EO6-0011-R11b-SM-6M47M C1, A1 10 Brain Brain - Cerebellar Hemisphere 0002037 1375 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992638 502904 0.943398 0.994153 0.745176 23300 1 76 0.00267654 128 0 7.18085e+07 0.0559724 816334 7.22308e+07 1.06126e+07 23330 3.57545e+07 0 0.198222 0.994153 0.740819 7.18085e+07 0.00348576 1.54995e+07 1.33746e+07 1.54862e+07 159 1.55197e+07 1.05867e+07 0.00308054 1.55679e+07 50.0776 0.0113017 0.995668 0 49.9785 GTEX-15EO6-0011-R2a-SM-6M46R C1, A1 7.5 Brain Brain - Substantia nigra 0002038 1375 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994283 314549 0.967219 0.995831 0.853035 23083 1 76 0.00250616 273 0 8.0272e+07 0.0324143 4.58105e+06 8.0608e+07 1.1203e+07 23104 4.0017e+07 0 0.114184 0.995831 0.849479 8.0272e+07 0.00354482 1.77628e+07 1.60886e+07 1.79057e+07 279 1.77713e+07 1.02021e+07 0.00302468 1.80135e+07 50.3384 0.0568312 0.997379 0 50.2003 GTEX-15EO6-0011-R3b-SM-7KUDY C1, A1 8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1375 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985993 1.28439e+06 0.946329 0.990893 0.828153 24800 1 76 0.00305282 273 0 9.73866e+07 0.053187 4.29294e+06 9.82816e+07 8.44208e+06 24824 4.83098e+07 0 0.118177 0.990893 0.820611 9.73866e+07 0.00352186 2.09492e+07 3.13945e+07 2.10564e+07 308 2.12504e+07 1.25635e+07 0.00328618 2.11966e+07 49.9367 0.0436799 0.995793 0 50.1276 GTEX-15EO6-0011-R4a-SM-7KUKZ C1, A1 7.6 Brain Brain - Amygdala 0001876 1375 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990963 915625 0.954803 0.993031 0.835384 24789 1 76 0.00345878 373 0 1.0237e+08 0.044799 6.72146e+06 1.03088e+08 7.21993e+06 24811 5.09356e+07 0 0.119419 0.993031 0.829562 1.0237e+08 0.00455419 2.2055e+07 3.15205e+07 2.23957e+07 337 2.2415e+07 1.18486e+07 0.00400534 2.22311e+07 49.794 0.065201 0.995099 0 50.3831 GTEX-15EO6-0011-R4a-SM-7KULH C1, A1 7 Brain Brain - Amygdala 0001876 1375 BP-50740 RNA isolation_PAXgene Tissue miRNA 03/21/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990269 1.44942e+06 0.932574 0.992372 0.804038 24283 1 76 0.00366739 271 0 8.32065e+07 0.0671174 5.88984e+06 8.38461e+07 6.39158e+06 24303 4.13934e+07 0 0.128536 0.992372 0.797905 8.32065e+07 0.00433367 1.75339e+07 4.48326e+07 1.78852e+07 264 1.79201e+07 9.09594e+06 0.00399982 1.76815e+07 49.6649 0.0702458 0.994475 0 50.4959 GTEX-15EO6-0011-R5b-SM-7KUDZ C1, A1 9.3 Brain Brain - Caudate (basal ganglia) 0001873 1375 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988595 1.27706e+06 0.949161 0.992237 0.819807 24958 1 76 0.00294173 271 0 9.6705e+07 0.0503472 3.70438e+06 9.74615e+07 7.82768e+06 24983 4.80214e+07 0 0.129354 0.992237 0.813442 9.6705e+07 0.00362577 2.09201e+07 2.8064e+07 2.09278e+07 294 2.11678e+07 1.3637e+07 0.0032825 2.10111e+07 49.8143 0.0380086 0.995879 0 50.0092 GTEX-15EO6-0011-R6a-SM-7KULK C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1375 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991586 662037 0.960406 0.993552 0.834739 23824 1 76 0.0035509 270 0 8.73872e+07 0.0392956 7.12876e+06 8.79543e+07 6.21551e+06 23842 4.35082e+07 0 0.125667 0.993552 0.829357 8.73872e+07 0.00442939 1.87838e+07 3.01926e+07 1.92286e+07 289 1.91823e+07 9.67448e+06 0.00398928 1.8976e+07 49.7297 0.0810507 0.995519 0 50.585 GTEX-15EO6-0011-R7a-SM-6M46Q C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 1375 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994985 578845 0.951458 0.996281 0.827115 22752 1 76 0.00252912 153 0 6.46183e+07 0.0482022 3.75748e+06 6.48595e+07 8.86715e+06 22765 3.22185e+07 0 0.124343 0.996281 0.82404 6.46183e+07 0.00334008 1.40782e+07 2.12491e+07 1.39903e+07 184 1.39341e+07 7.27608e+06 0.00293407 1.42266e+07 50.5194 0.0579326 0.997578 0 49.8435 GTEX-15EO6-0011-R9a-SM-6PALG C1, A1 8.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1375 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978483 685966 0.956089 0.987089 0.801118 25381 1 76 0.00329247 380 0 1.07168e+08 0.043527 2.64486e+06 1.0857e+08 1.18155e+07 25418 5.29642e+07 0 0.15497 0.987089 0.790775 1.07168e+08 0.00600484 2.35333e+07 1.90842e+07 2.35426e+07 349 2.38637e+07 1.49597e+07 0.00463683 2.41099e+07 50.2566 0.0243609 0.995694 0 50.0099 GTEX-15EO6-0126-SM-6LPKJ 1 C1 2 pieces, mild regressive changes 6.8 Thyroid Thyroid 0002046 1388 773 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992289 203376 0.968517 0.994472 0.797688 24320 1 76 0.00257887 213 0 8.85450e+07 0.0312327 183852 8.90373e+07 1.3334e+07 24355 4.40895e+07 0 0.170829 0.994472 0.793279 8.85450e+07 0.00343173 1.9424e+07 9.17486e+06 1.9426e+07 223 1.94145e+07 1.5598e+07 0.00300436 1.96188e+07 50.2617 0.00206489 0.996655 0 50.0025 GTEX-15EO6-0926-SM-6M48N 1 C1 6 pieces, confirmed target muscularis 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1403 762 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99361 97750 0.969823 0.995197 0.808338 22123 1 76 0.00251747 127 0 5.80836e+07 0.0300167 889227 5.83639e+07 7.99109e+06 22143 2.89429e+07 0 0.161485 0.995197 0.804455 5.80836e+07 0.003605 1.25893e+07 5.20509e+06 1.25583e+07 146 1.25156e+07 8.21751e+06 0.00306037 1.27193e+07 50.4036 0.0152359 0.996785 0 49.9383 GTEX-15EO6-1026-SM-7KUG9 2 C1 6 pieces, unusually poorly preserved, target squamous mucosa sloughing, ~0.15mm where visible, chronically inflamed 5.7 Esophagus Esophagus - Mucosa 0006920 1404 761 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984697 305563 0.964591 0.989142 0.782267 24486 1 76 0.0033234 204 0 8.57313e+07 0.0352258 909641 8.66724e+07 8.46212e+06 24511 4.25342e+07 0 0.182323 0.989142 0.773773 8.57313e+07 0.00374519 1.86922e+07 1.2105e+07 1.89488e+07 244 1.906e+07 1.15005e+07 0.00353334 1.89445e+07 49.8481 0.0104952 0.993588 0 50.3408 GTEX-15EO6-2326-SM-6LPKK 1 C1 6 pieces target muscularis, trace adherent but completely autolyzed mucosa 'contaminants' present 6.2 Colon Colon - Sigmoid 0001159 1431 764 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991021 94114 0.970046 0.993262 0.777358 22593 1 76 0.002719 123 0 6.00029e+07 0.0297556 438249 6.04099e+07 9.28929e+06 22610 2.98625e+07 0 0.192687 0.993262 0.77212 6.00029e+07 0.00372057 1.30534e+07 5.87684e+06 1.29904e+07 137 1.29522e+07 9.4342e+06 0.00321865 1.32207e+07 50.5129 0.00725458 0.995502 0 49.879 GTEX-15EO6-2426-SM-6PALZ 1 C1 6 pieces, minimal adherent dermal fat; squamous epithelium is ~30-40 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1432 763 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981084 260577 0.976429 0.987514 0.7574 25463 1 76 0.0034674 390 0 1.32226e+08 0.0233342 618739 1.33898e+08 1.62462e+07 25526 6.55217e+07 0 0.219029 0.987514 0.747942 1.32226e+08 0.00564215 2.89838e+07 1.47276e+07 2.89603e+07 339 2.933e+07 2.17774e+07 0.00454769 2.94439e+07 50.0969 0.00462097 0.993943 0 49.9797 GTEX-15EO6-2626-SM-6PALK 0 C1 2 pieces focal adherent fat up to ~0.5mm 7.2 Nerve Nerve - Tibial 0001323 1433 763 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.97794 258907 0.968472 0.986157 0.764739 25611 1 76 0.00328806 393 0 1.25547e+08 0.0312573 623296 1.27309e+08 1.36961e+07 25669 6.20639e+07 0 0.203732 0.986157 0.754153 1.25547e+08 0.00590205 2.75663e+07 1.17838e+07 2.74867e+07 364 2.79258e+07 2.0085e+07 0.00458417 2.81328e+07 50.1846 0.00489591 0.994375 0 49.9277 GTEX-15EO6-2826-SM-6PANB 0 C1 2 pieces, 20-25% interstitial fat, rep delineated 8 Muscle Muscle - Skeletal 0011907 1434 763 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.983599 196727 0.98042 0.990004 0.857166 21273 1 76 0.00315375 278 0 1.04241e+08 0.0193512 1.24649e+06 1.05294e+08 1.22212e+07 21293 5.16912e+07 0 0.123254 0.990004 0.848598 1.04241e+08 0.00525205 2.26471e+07 1.06632e+07 2.25989e+07 296 2.28597e+07 2.12969e+07 0.00419611 2.30314e+07 50.1871 0.0118382 0.996409 0 49.9468 GTEX-15EO6-2826-SM-CYKSA 0 C1 2 pieces, 20-25% interstitial fat, rep delineated 8 Muscle Muscle - Skeletal 0011907 1434 763 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 RIP-Seq GTEX-15EO6-2926-SM-6M48D 1 C1 3 pieces, no abnormalities 7.5 Brain Brain - Cerebellum 0002037 1437 761 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993113 275264 0.943494 0.994431 0.719594 23029 1 76 0.00268532 129 0 6.911e+07 0.0560777 680699 6.9497e+07 9.83513e+06 23054 3.44269e+07 0 0.2239 0.994431 0.715586 6.911e+07 0.00341857 1.4911e+07 1.21522e+07 1.49381e+07 147 1.49506e+07 9.27538e+06 0.00305146 1.49827e+07 50.0536 0.00979465 0.995749 0 50.0453 GTEX-15EO6-3026-SM-7KUMA 1 C1 4 pieces, no abnormalities 7.4 Brain Brain - Cortex 0001870 1438 760 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991921 497408 0.962766 0.993856 0.842983 23590 1 76 0.00341235 199 0 7.84209e+07 0.0368294 2.97579e+06 7.89057e+07 5.53031e+06 23604 3.90299e+07 0 0.119783 0.993856 0.837804 7.84209e+07 0.00448227 1.70953e+07 1.54769e+07 1.73388e+07 240 1.74153e+07 1.01746e+07 0.00394627 1.71524e+07 49.6196 0.0377132 0.995791 0 50.3535 GTEX-15EO6-3126-SM-6LPIQ 1 C1 1 piece, ~20% neurohypophysis (delineated); rest is adenohypophysis; adherent dura ensquared. 6.8 Pituitary Pituitary 0000007 1438 761 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991313 184072 0.962433 0.993671 0.770496 24681 1 76 0.0026938 119 0 6.18882e+07 0.0372908 468505 6.22824e+07 9.88807e+06 24709 3.0813e+07 0 0.191938 0.993671 0.765619 6.18882e+07 0.00381254 1.34999e+07 9.0508e+06 1.3504e+07 134 1.35272e+07 1.0078e+07 0.00325184 1.36167e+07 50.1649 0.00752227 0.996029 0 50.0075 GTEX-15EOM-0004-SM-6RBKT B1 Blood Whole Blood 0013756 151 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15EOM-0004-SM-7DLFA B1 Blood Whole Blood 0013756 151 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15EOM-0008-SM-E6CPI B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 181 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992054 923796 0.984992 0.994048 0.885423 20117 1 76 0.00190297 291 0 1.08861e+08 0.0146853 193154 1.09513e+08 1.89379e+07 20132 5.4159e+07 0 0.0995697 0.994048 0.880152 1.08861e+08 0.00273523 2.5038e+07 1.10894e+07 2.42275e+07 292 2.44233e+07 2.96326e+07 0.00231827 2.50494e+07 50.6327 0.00176376 0.996042 0 49.1775 GTEX-15EOM-0126-SM-7KUGG 1 B1 6 pieces; up to 30% attached fat, only focal strip of epidermis measuring 49 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 186 618 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.982048 420618 0.974774 0.985231 0.744518 24156 1 76 0.00345507 178 0 8.97045e+07 0.0249585 1.02756e+06 9.10492e+07 8.44377e+06 24201 4.45557e+07 0 0.230256 0.985231 0.733522 8.97045e+07 0.00322128 1.97933e+07 1.33342e+07 2.00466e+07 196 2.01668e+07 1.59869e+07 0.00333855 1.99522e+07 49.7326 0.0112858 0.988413 0 50.3179 GTEX-15EOM-0326-SM-6LLJH 1 B1 2 pieces, ? poor fixation 6.5 Muscle Muscle - Skeletal 0011907 189 615 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 EXCLUDE 0.97354 183929 0.980055 0.983061 0.834654 21030 1 76 0.00232562 265 0 7.81857e+07 0.0198054 7.16414e+06 7.95328e+07 6.95848e+06 21050 3.86041e+07 0 0.1454 0.983061 0.820516 7.81857e+07 0.00383267 1.75429e+07 1.18908e+07 1.74518e+07 289 1.77275e+07 8.0289e+06 0.00307185 1.79503e+07 50.3123 0.0900778 0.992583 0 49.8698 GTEX-15EOM-0526-SM-7KUFY 1 B1 2 pieces; well trimmed 8.6 Blood Vessel Artery - Tibial 0007610 191 613 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988605 356661 0.979648 0.992301 0.86626 20556 1 76 0.00270677 272 0 9.30947e+07 0.0199899 400937 9.3817e+07 7.80865e+06 20568 4.62461e+07 0 0.113389 0.992301 0.85959 9.30947e+07 0.00333115 2.02248e+07 7.12233e+06 2.04554e+07 261 2.05769e+07 2.07186e+07 0.0030178 2.04324e+07 49.8238 0.00427361 0.995997 0 50.2835 GTEX-15EOM-0626-SM-6LPKI 0 B1 2 pieces 7.9 Heart Heart - Left Ventricle 0006566 200 604 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.993422 106904 0.986438 0.995495 0.872321 19497 1 76 0.00219767 196 0 6.77443e+07 0.0133569 1.58386e+06 6.80509e+07 1.08183e+07 19503 3.37577e+07 0 0.114118 0.995495 0.868391 6.77443e+07 0.00303382 1.52116e+07 1.39762e+07 1.4983e+07 219 1.48723e+07 9.91457e+06 0.00261488 1.54567e+07 50.9635 0.0232747 0.997568 0 49.6213 GTEX-15EOM-1526-SM-68723 1 B1 2 pieces 6.3 Ovary Ovary 0000992 226 578 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.988949 279853 0.964625 0.989679 0.695831 23216 1 76 0.00233464 150 0 8.13002e+07 0.0351495 93583 8.2148e+07 4.38687e+06 23265 4.04659e+07 0 0.268793 0.989679 0.68865 8.13002e+07 0.0029047 1.78548e+07 1.1335e+07 1.79462e+07 162 1.78824e+07 1.35448e+07 0.00261946 1.79849e+07 50.1429 0.0011392 0.990409 0 50.1277 GTEX-15EOM-1926-SM-69LQ2 1 B1 7 pieces; includes some attached submucosal glands and larger vessels 8.1 Esophagus Esophagus - Muscularis 0004648 242 562 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5451 06/26/2014 TruSeq.v1 EXCLUDE 0.993523 197349 0.977505 0.994805 0.829937 21763 1 76 0.00175181 203 0 7.9191e+07 0.0222413 588700 7.96046e+07 4.73074e+06 21783 3.94648e+07 0 0.147568 0.994805 0.825626 7.9191e+07 0.00258244 1.7325e+07 6.92451e+06 1.74575e+07 207 1.73961e+07 1.44327e+07 0.00216659 1.7483e+07 50.1246 0.0073953 0.996087 0 50.1905 GTEX-15EOM-2326-SM-7KUMV 1 B1 2 pieces 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 249 555 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.99223 211112 0.980554 0.993793 0.818753 21929 1 76 0.00328221 138 0 6.50161e+07 0.0192128 691590 6.54221e+07 4.63197e+06 21947 3.23817e+07 0 0.161801 0.993793 0.813671 6.50161e+07 0.00379507 1.43368e+07 8.05881e+06 1.45323e+07 157 1.45449e+07 1.08395e+07 0.00353824 1.44173e+07 49.7798 0.0105712 0.995356 0 50.3385 GTEX-15EOM-5004-SM-79ONJ B1 6.6 Muscle Muscle - Skeletal 0011907 190 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.99115 183776 0.978647 0.991428 0.872685 18773 1 76 0.00270985 153 0 6.3806e+07 0.0212208 3.8205e+06 6.43577e+07 3.63112e+06 18777 3.18051e+07 0 0.105962 0.991428 0.865204 6.3806e+07 0.00391128 1.40846e+07 9.50341e+06 1.43416e+07 185 1.43625e+07 8.71383e+06 0.0033104 1.40801e+07 49.5035 0.0593634 0.991705 0 50.452 GTEX-15EOM-5007-SM-793DG B1 7.7 Heart Heart - Left Ventricle 0006566 200 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995093 582023 0.978194 0.996175 0.863086 20772 1 76 0.00261425 198 0 8.00139e+07 0.0215046 1.48837e+06 8.03212e+07 1.16005e+07 20784 3.98868e+07 0 0.115108 0.996175 0.859784 8.00139e+07 0.00285523 1.7598e+07 1.83054e+07 1.76365e+07 250 1.76782e+07 1.43581e+07 0.00273461 1.76463e+07 49.9549 0.0185302 0.997256 0 50.0546 GTEX-15EOM-5007-SM-AN43E B1 Heart Heart - Left Ventricle 0006566 200 ChIP-Seq GTEX-15EOM-5010-SM-7P8PA B1 7.7 Lung Lung 0008952 205 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991222 512354 0.975526 0.992755 0.866025 23184 1 76 0.00304295 280 0 1.07651e+08 0.0241857 560251 1.08436e+08 1.56105e+07 23205 5.3628e+07 0 0.1095 0.992755 0.859751 1.07651e+08 0.00348798 2.37554e+07 1.66766e+07 2.41097e+07 293 2.41228e+07 2.12655e+07 0.00326512 2.39048e+07 49.7731 0.00516664 0.994288 0 50.3701 GTEX-15EOM-5010-SM-AN43D B1 Lung Lung 0008952 205 ChIP-Seq GTEX-15EOM-5013-SM-7MKF9 B1 9.1 Esophagus Esophagus - Mucosa 0006920 244 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982679 533011 0.976791 0.988537 0.831647 23649 1 76 0.003749 278 0 1.02587e+08 0.0228644 447097 1.03777e+08 1.44066e+07 23675 5.08337e+07 0 0.145143 0.988537 0.822115 1.02587e+08 0.00497522 2.27756e+07 1.74698e+07 2.30892e+07 266 2.34056e+07 2.16995e+07 0.00435848 2.30539e+07 49.6215 0.00430826 0.994395 0 50.3419 GTEX-15EOM-5016-SM-7P8SR B1 7.7 Esophagus Esophagus - Muscularis 0004648 241 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.927332 508078 0.96839 0.961063 0.829845 23402 1 76 0.00425433 160 0 7.99484e+07 0.0314039 931131 8.31875e+07 1.28627e+07 23419 3.84445e+07 0 0.138544 0.961063 0.797533 7.99484e+07 0.00935745 1.66593e+07 1.26042e+07 1.66517e+07 176 1.79625e+07 1.25633e+07 0.00671633 1.79298e+07 49.9545 0.0111932 0.994794 0 49.9885 GTEX-15EOM-5019-SM-793DK B1 7.7 Breast Breast - Mammary Tissue 0008367 260 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994407 499827 0.973812 0.995496 0.835796 23111 1 76 0.00270373 209 0 8.55651e+07 0.0258781 665638 8.59522e+07 1.14101e+07 23133 4.26522e+07 0 0.138016 0.995496 0.832032 8.55651e+07 0.00298073 1.89669e+07 1.27699e+07 1.90504e+07 237 1.90616e+07 1.66683e+07 0.00284208 1.90446e+07 49.9776 0.00774428 0.996585 0 50.1098 GTEX-15ER7-0002-SM-6RBKV C1 Blood Whole Blood 0013756 1263 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15ER7-0002-SM-7DLFM C1 Blood Whole Blood 0013756 1263 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-6363,LCSET-7187 05/08/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15ER7-0008-SM-E6CPG C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1366 BP-53400 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99238 929173 0.977186 0.994279 0.872418 19825 1 76 0.00188944 189 0 9.11486e+07 0.0225209 202741 9.16731e+07 1.53107e+07 19838 4.53537e+07 0 0.104768 0.994279 0.867426 9.11486e+07 0.00290745 2.07848e+07 1.56934e+07 2.01773e+07 201 2.03429e+07 2.37792e+07 0.00239748 2.07898e+07 50.5432 0.00221157 0.996178 0 49.2585 GTEX-15ER7-0011-R10a-SM-AHZNC C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1272 ChIP-Seq GTEX-15ER7-0011-R11a-SM-6LPIL C1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 1272 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991388 471995 0.946989 0.993621 0.758983 23292 1 76 0.00273887 155 0 7.15843e+07 0.0524461 630220 7.20438e+07 1.12911e+07 23316 3.56218e+07 0 0.188007 0.993621 0.754141 7.15843e+07 0.00354864 1.5497e+07 1.33473e+07 1.54134e+07 166 1.5443e+07 1.01202e+07 0.00314284 1.56163e+07 50.2791 0.00874773 0.995854 0 49.8647 GTEX-15ER7-0011-R1b-SM-7KUE1 C1, A1 8.1 Brain Brain - Hippocampus 0001954 1272 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988232 680620 0.959877 0.991902 0.836236 23606 1 76 0.00300952 272 0 8.18468e+07 0.039786 3.25985e+06 8.2515e+07 7.34384e+06 23628 4.06589e+07 0 0.123641 0.991902 0.829464 8.18468e+07 0.0033789 1.79337e+07 1.69746e+07 1.79952e+07 272 1.80418e+07 9.30185e+06 0.00319353 1.81541e+07 50.1551 0.0395061 0.995571 0 50.0856 GTEX-15ER7-0011-R2a-SM-6M46O C1, A1 8 Brain Brain - Substantia nigra 0002038 1272 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994535 613332 0.957613 0.996004 0.858082 22670 1 76 0.00227826 200 0 6.87821e+07 0.0419471 1.54038e+06 6.9058e+07 9.67453e+06 22679 3.4283e+07 0 0.0995308 0.996004 0.854653 6.87821e+07 0.00320246 1.51036e+07 1.58983e+07 1.50986e+07 204 1.50625e+07 1.00046e+07 0.00273968 1.52415e+07 50.2954 0.0223056 0.997473 0 49.9917 GTEX-15ER7-0011-R3a-SM-6LPIK C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1272 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992906 631831 0.955685 0.995018 0.83957 23217 1 76 0.00250717 266 0 7.42003e+07 0.0438634 3.63033e+06 7.45718e+07 1.10397e+07 23235 3.69551e+07 0 0.116114 0.995018 0.835388 7.42003e+07 0.00333261 1.62251e+07 2.1529e+07 1.62097e+07 260 1.61447e+07 8.53132e+06 0.00291902 1.64336e+07 50.4434 0.0486824 0.997131 0 49.9762 GTEX-15ER7-0011-R4a-SM-6M46S C1, A1 6.7 Brain Brain - Amygdala 0001876 1272 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994498 506846 0.958531 0.99593 0.841533 22157 1 76 0.00237635 197 0 6.73349e+07 0.0411283 5.39824e+06 6.76101e+07 8.87146e+06 22176 3.35702e+07 0 0.116998 0.99593 0.838108 6.73349e+07 0.00334456 1.47132e+07 2.26833e+07 1.47218e+07 229 1.46162e+07 6.70737e+06 0.00285976 1.49194e+07 50.5133 0.0798437 0.997362 0 50.0146 GTEX-15ER7-0011-R5b-SM-6M46T C1, A1 9.5 Brain Brain - Caudate (basal ganglia) 0001873 1272 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99439 708951 0.951625 0.995741 0.818899 23278 1 76 0.00234832 197 0 7.62715e+07 0.0478369 2.51142e+06 7.65977e+07 1.11541e+07 23295 3.80177e+07 0 0.132727 0.995741 0.815411 7.62715e+07 0.00314933 1.65785e+07 2.32732e+07 1.64812e+07 252 1.6473e+07 9.96138e+06 0.00274829 1.66919e+07 50.33 0.0327871 0.997091 0 49.8528 GTEX-15ER7-0011-R6a-SM-6M46M C1, A1 9.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1272 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99427 598400 0.95328 0.995738 0.824811 23347 1 76 0.00237252 198 0 7.03868e+07 0.0462356 2.71719e+06 7.0688e+07 9.71413e+06 23364 3.50786e+07 0 0.128469 0.995738 0.821296 7.03868e+07 0.00327757 1.53342e+07 1.80644e+07 1.5266e+07 213 1.52424e+07 9.0741e+06 0.00282438 1.54638e+07 50.3605 0.0384392 0.997207 0 49.8886 GTEX-15ER7-0011-R7a-SM-6M46N C1, A1 9.2 Brain Brain - Putamen (basal ganglia) 0001874 1272 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994653 659392 0.955175 0.996085 0.834508 22608 1 76 0.00232532 267 0 7.55692e+07 0.0444977 3.81646e+06 7.58661e+07 1.02145e+07 22624 3.76771e+07 0 0.120668 0.996085 0.831241 7.55692e+07 0.00322146 1.64013e+07 2.65253e+07 1.64605e+07 265 1.63733e+07 8.00669e+06 0.00277274 1.6603e+07 50.3483 0.0503052 0.997517 0 50.09 GTEX-15ER7-0011-R8a-SM-7KUL2 C1, A1 8.1 Brain Brain - Hypothalamus 0001898 1272 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990999 467891 0.957182 0.993031 0.822666 23101 1 76 0.00327954 124 0 5.38515e+07 0.0424051 2.06525e+06 5.42294e+07 3.57394e+06 23119 2.67965e+07 0 0.134516 0.993031 0.816934 5.38515e+07 0.0039617 1.16458e+07 1.31261e+07 1.18576e+07 141 1.18542e+07 6.63692e+06 0.00361992 1.17502e+07 49.7798 0.0380836 0.995064 0 50.4506 GTEX-15ER7-0011-R9b-SM-6PALF C1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1272 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982525 643508 0.958919 0.989045 0.819234 25508 1 76 0.00326682 390 0 1.18836e+08 0.040599 2.32492e+06 1.20152e+08 1.37669e+07 25546 5.88895e+07 0 0.139685 0.989045 0.81026 1.18836e+08 0.00541039 2.62209e+07 2.02277e+07 2.63625e+07 345 2.65577e+07 1.80306e+07 0.00433154 2.67901e+07 50.2178 0.0193498 0.995565 0 50.1346 GTEX-15ER7-0126-SM-6PAM2 1 C1 2 pieces; well trimmed 7 Nerve Nerve - Tibial 0001323 1361 1193 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.975292 235069 0.963209 0.984639 0.724725 25994 1 76 0.00335314 217 0 1.0572e+08 0.0365322 487146 1.0737e+08 1.25061e+07 26053 5.21722e+07 0 0.238485 0.984639 0.713592 1.0572e+08 0.0062046 2.30151e+07 1.0164e+07 2.29392e+07 245 2.33565e+07 1.4743e+07 0.00476534 2.35623e+07 50.2193 0.00453709 0.993986 0 49.9174 GTEX-15ER7-0226-SM-7KUEU 0 C1 2 pieces; 1 piece includes ~10% fat and vessels 8.7 Muscle Muscle - Skeletal 0011907 1363 1191 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.98442 1.01515e+06 0.984621 0.990673 0.885822 22972 1 76 0.00273554 384 0 2.26086e+08 0.0150463 2.23147e+06 2.28215e+08 1.95886e+07 22996 1.12046e+08 0 0.0987989 0.990673 0.87756 2.26086e+08 0.00318309 4.8133e+07 2.76399e+07 4.8671e+07 350 4.92776e+07 5.19531e+07 0.0029579 4.87942e+07 49.7536 0.00977793 0.996926 0 50.2779 GTEX-15ER7-0226-SM-CYKUA 0 C1 2 pieces; 1 piece includes ~10% fat and vessels 8.7 Muscle Muscle - Skeletal 0011907 1363 1191 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-15ER7-0326-SM-7KUEV 1 C1 6 pieces; well trimmed, epidermis measures 44 microns 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1365 1189 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984689 382957 0.974695 0.990053 0.826818 22403 1 76 0.00310782 225 0 7.41982e+07 0.0249642 273707 7.49436e+07 6.39336e+06 22430 3.67783e+07 0 0.147876 0.990053 0.818594 7.41982e+07 0.00366552 1.59483e+07 9.59957e+06 1.61155e+07 172 1.63325e+07 1.42864e+07 0.00338516 1.61103e+07 49.6576 0.00365217 0.995417 0 50.2607 GTEX-15ER7-0426-SM-6PAM3 0 C1 2 pieces 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1368 1187 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978572 182782 0.969232 0.986565 0.772333 24221 1 76 0.00332914 212 0 9.52532e+07 0.0304895 789162 9.65503e+07 1.11233e+07 24257 4.70966e+07 0 0.196899 0.986565 0.761957 9.52532e+07 0.00587287 2.06635e+07 1.0149e+07 2.06867e+07 251 2.09614e+07 1.3069e+07 0.0045907 2.11137e+07 50.1811 0.00817359 0.994559 0 50.028 GTEX-15ER7-0626-SM-6PANF 1 C1 6 pieces; some include up to 30% attached and internal fat 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1371 1185 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981442 232214 0.975619 0.98842 0.788006 24906 1 76 0.00328098 404 0 1.1791e+08 0.0239522 740399 1.19292e+08 1.29317e+07 24952 5.83734e+07 0 0.187613 0.98842 0.778881 1.1791e+08 0.00552565 2.58098e+07 1.37457e+07 2.57265e+07 339 2.60633e+07 2.08656e+07 0.00439539 2.62826e+07 50.2095 0.00620661 0.995398 0 49.9191 GTEX-15ER7-0726-SM-7KUMF 2 C1 2 pieces; some fibrosis and vague nodularity 6.7 Thyroid Thyroid 0002046 1372 1184 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989115 552520 0.952191 0.991418 0.716965 25716 1 76 0.0035191 205 0 9.56132e+07 0.0475667 886466 9.64409e+07 7.07429e+06 25774 4.75476e+07 0 0.235226 0.991418 0.710812 9.56132e+07 0.00473288 2.05316e+07 1.81521e+07 2.07692e+07 226 2.08301e+07 1.21163e+07 0.00412458 2.06817e+07 49.8212 0.00919181 0.993721 0 50.2876 GTEX-15ER7-0826-SM-6PALW 1 C1 2 pieces; 10-40% fat 8.3 Heart Heart - Atrial Appendage 0006631 1374 1183 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.98459 149343 0.97713 0.990417 0.800616 22865 1 76 0.00320395 156 0 8.07726e+07 0.0225324 1.43538e+06 8.15541e+07 9.21747e+06 22890 4.00652e+07 0 0.176515 0.990417 0.792944 8.07726e+07 0.00514928 1.74947e+07 9.48693e+06 1.75351e+07 196 1.76196e+07 1.32259e+07 0.00417089 1.78332e+07 50.3013 0.0176003 0.996244 0 50.0576 GTEX-15ER7-0926-SM-7KUMG 1 C1 2 pieces; mild congestion and edema 7.4 Lung Lung 0008952 1377 1180 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989766 322778 0.967643 0.991864 0.695717 24809 1 76 0.00383663 167 0 8.58813e+07 0.031966 442537 8.65857e+07 6.43755e+06 24853 4.27095e+07 0 0.271926 0.991864 0.690056 8.58813e+07 0.00469098 1.88647e+07 9.98992e+06 1.89808e+07 183 1.90412e+07 1.09071e+07 0.0042629 1.89798e+07 49.9194 0.00511097 0.993963 0 50.1533 GTEX-15ER7-0926-SM-CYKTS-ELUATE 1 C1 2 pieces; mild congestion and edema 7.4 Lung Lung 0008952 1377 1180 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 RIP-Seq GTEX-15ER7-0926-SM-CYKTS-INPUT 1 C1 2 pieces; mild congestion and edema 7.4 Lung Lung 0008952 1377 1180 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 RIP-Seq GTEX-15ER7-0926-SM-CYKTS-SUP 1 C1 2 pieces; mild congestion and edema 7.4 Lung Lung 0008952 1377 1180 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 RIP-Seq GTEX-15ER7-1026-SM-7KUMD 1 C1 2 pieces; 5-10% fibrous 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1378 1180 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989109 383761 0.967264 0.991688 0.776505 25375 1 76 0.00350397 275 0 9.71447e+07 0.0324816 812291 9.79589e+07 7.26229e+06 25415 4.83023e+07 0 0.190759 0.991688 0.770051 9.71447e+07 0.00491179 2.11287e+07 1.18555e+07 2.14185e+07 268 2.144e+07 1.38534e+07 0.00420605 2.13407e+07 49.884 0.00829216 0.994267 0 50.3405 GTEX-15ER7-1126-SM-6M47F 2 C1 2 pieces; cortex and medulla, mild to moderate autolysis 5.9 Adrenal Gland Adrenal Gland 0002369 1380 1178 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99364 132173 0.971138 0.995174 0.795272 21819 1 76 0.00243236 131 0 5.93954e+07 0.0287026 2.83487e+06 5.96834e+07 8.16225e+06 21839 2.96056e+07 0 0.175866 0.995174 0.791434 5.93954e+07 0.00351875 1.31266e+07 8.93273e+06 1.3188e+07 164 1.30984e+07 6.21007e+06 0.00297472 1.32993e+07 50.3806 0.0474984 0.996707 0 50.1167 GTEX-15ER7-1326-SM-6LPK9 2 C1 2 pieces; islets well visualized, includes portion of large duct, mild to moderate autolysis 7.3 Pancreas Pancreas 0001150 1384 1175 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990705 153590 0.981088 0.992768 0.857015 19994 1 76 0.00266114 81 0 6.54662e+07 0.0185968 129435 6.59431e+07 1.05949e+07 20004 3.26105e+07 0 0.124073 0.992768 0.850817 6.54662e+07 0.00347466 1.53066e+07 2.97008e+07 1.53584e+07 94 1.5314e+07 2.19875e+07 0.00306705 1.54867e+07 50.2802 0.00196283 0.994831 0 50.0845 GTEX-15ER7-1426-SM-6PAMA 1 C1 2 pieces; 1 includes ~30% attached fat 6.4 Blood Vessel Artery - Coronary 0001621 1387 1173 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976849 210785 0.966194 0.985287 0.756021 24183 1 76 0.00343514 211 0 9.7871e+07 0.0334954 549590 9.93325e+07 1.16741e+07 24233 4.83570e+07 0 0.210173 0.985287 0.744897 9.7871e+07 0.00613318 2.08146e+07 9.17914e+06 2.08033e+07 218 2.1116e+07 1.52592e+07 0.00477261 2.12864e+07 50.201 0.00553283 0.993725 0 49.9865 GTEX-15ER7-1526-SM-6LLHO 1 C1 2 pieces 5.9 Spleen Spleen 0002106 1389 1171 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.974681 336912 0.951024 0.983822 0.68601 26372 1 76 0.00289134 207 0 1.04138e+08 0.0486197 690376 1.0585e+08 9.11533e+06 26430 5.14083e+07 0 0.265014 0.983822 0.674911 1.04138e+08 0.00441383 2.23672e+07 1.51332e+07 2.23335e+07 245 2.26746e+07 1.33108e+07 0.00364552 2.29467e+07 50.2982 0.00652219 0.992963 0 49.9623 GTEX-15ER7-1626-SM-6PAMZ 1 C1 2 pieces; 50 and 70% fat with fibrocollagenous stroma with benign ducts and lobules 7.3 Breast Breast - Mammary Tissue 0008367 1390 1172 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979266 285005 0.963745 0.986602 0.705234 27540 1 76 0.00356095 283 0 1.17402e+08 0.0355962 705219 1.18996e+08 1.35749e+07 27620 5.80646e+07 0 0.258511 0.986602 0.695785 1.17402e+08 0.00591138 2.5703e+07 1.41524e+07 2.56898e+07 282 2.60695e+07 1.74895e+07 0.00472743 2.61691e+07 50.0953 0.0059264 0.993937 0 49.9873 GTEX-15ER7-1726-SM-6PAMX 1 C1 2 pieces 7.6 Heart Heart - Left Ventricle 0006566 1392 1171 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980922 237420 0.979205 0.988515 0.814087 22510 1 76 0.00317632 368 0 1.03126e+08 0.0206435 4.68172e+06 1.04324e+08 1.16801e+07 22539 5.10716e+07 0 0.165118 0.988515 0.804737 1.03126e+08 0.0056414 2.27729e+07 1.61644e+07 2.29068e+07 334 2.31133e+07 1.16929e+07 0.00439939 2.32825e+07 50.1822 0.0448768 0.996109 0 50.1466 GTEX-15ER7-1826-SM-6LLI7 1 C1 2 pieces; congestion, mild fatty change 6.9 Liver Liver 0001114 1393 1170 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977291 192358 0.970833 0.985732 0.797507 23291 1 76 0.00247667 266 0 9.05401e+07 0.0290373 1.49521e+06 9.18506e+07 8.17372e+06 23316 4.47803e+07 0 0.173326 0.985732 0.786129 9.05401e+07 0.00387187 1.9511e+07 1.55465e+07 1.97978e+07 310 1.99088e+07 1.07314e+07 0.0031683 2.00814e+07 50.2159 0.0162787 0.994174 0 50.3649 GTEX-15ER7-1926-SM-7KUEW 1 C1 6 pieces; well trimmed 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1394 1170 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.980743 348501 0.966492 0.987246 0.77916 24222 1 76 0.00339551 207 0 8.6626e+07 0.0332712 1.02940e+06 8.77451e+07 8.66929e+06 24263 4.28690e+07 0 0.187332 0.987246 0.769222 8.6626e+07 0.00368125 1.85548e+07 8.68853e+06 1.88739e+07 224 1.90668e+07 1.287e+07 0.00353744 1.889e+07 49.7671 0.0117318 0.993749 0 50.4262 GTEX-15ER7-2026-SM-793B8 1 C1 6 pieces 7.8 Blood Vessel Artery - Aorta 0001496 1395 1170 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993508 242568 0.971835 0.994603 0.77433 22287 1 76 0.00298442 163 0 7.95602e+07 0.0277677 180183 7.9992e+07 1.09519e+07 22315 3.96304e+07 0 0.197504 0.994603 0.770151 7.95602e+07 0.00343549 1.71544e+07 6.87886e+06 1.71494e+07 174 1.7164e+07 1.38911e+07 0.00320971 1.72224e+07 50.0849 0.00225251 0.995698 0 49.9927 GTEX-15ER7-2126-SM-7939E 1 C1 6 pieces; focal chronic inflammation 8.7 Esophagus Esophagus - Mucosa 0006920 1396 1169 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992216 565921 0.971651 0.993374 0.767641 22178 1 76 0.00233293 126 0 6.07907e+07 0.0280954 247377 6.11962e+07 4.74252e+06 22196 3.0228e+07 0 0.20401 0.993374 0.762554 6.07907e+07 0.00298049 1.36777e+07 7.35578e+06 1.3598e+07 136 1.37745e+07 1.06055e+07 0.00265633 1.3573e+07 49.6316 0.00404236 0.994531 0 49.8539 GTEX-15ER7-2226-SM-7KFRN 2 C1 6 pieces; well trimmed 7.4 Esophagus Esophagus - Muscularis 0004648 1397 1169 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992009 295760 0.970476 0.993488 0.783862 24037 1 76 0.00281074 275 0 1.03239e+08 0.0292507 744069 1.03915e+08 7.81317e+06 24072 5.13719e+07 0 0.186615 0.993488 0.778757 1.03239e+08 0.00313025 2.20363e+07 9.35719e+06 2.2355e+07 314 2.23287e+07 1.66034e+07 0.00297026 2.22098e+07 49.8666 0.00716033 0.994966 0 50.3589 GTEX-15ER7-2326-SM-7KUN3 0 C1 2 pieces 7.5 Ovary Ovary 0000992 1400 1167 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990291 546983 0.964977 0.992304 0.715966 25808 1 76 0.00357887 278 0 1.09355e+08 0.0347236 191990 1.10203e+08 8.208e+06 25868 5.4409e+07 0 0.249011 0.992304 0.710456 1.09355e+08 0.0045406 2.39441e+07 1.56851e+07 2.41426e+07 257 2.42485e+07 1.81377e+07 0.00405876 2.40604e+07 49.8053 0.00174215 0.994317 0 50.2065 GTEX-15ER7-2426-SM-793B9 0 C1 2 pieces; myometrium only in this section 7.7 Uterus Uterus 0000995 1401 1166 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.989488 302110 0.964526 0.990602 0.733951 23852 1 76 0.00313962 139 0 7.43239e+07 0.0351963 136632 7.5029e+07 1.02999e+07 23888 3.70206e+07 0 0.230575 0.990602 0.727053 7.43239e+07 0.00354689 1.61826e+07 7.0979e+06 1.62395e+07 150 1.62672e+07 1.1998e+07 0.00334302 1.62362e+07 49.9522 0.00182106 0.991716 0 50.0876 GTEX-15ER7-2526-SM-7KUFW 0 C1 6 pieces; mild chronic inflammation 7.2 Vagina Vagina 0000996 1402 1166 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988812 260129 0.972488 0.992016 0.751983 23351 1 76 0.00310572 132 0 6.87628e+07 0.0272636 331236 6.93163e+07 5.57944e+06 23376 3.41625e+07 0 0.220505 0.992016 0.745979 6.87628e+07 0.00370771 1.53014e+07 8.33689e+06 1.54548e+07 148 1.55527e+07 1.04962e+07 0.00340574 1.54204e+07 49.7864 0.00477862 0.995219 0 50.2495 GTEX-15ER7-2826-SM-6PAN2 2 C1 6 pieces; predominantly muscularis, some submucosa, few collections of lymphocytes 6.6 Colon Colon - Sigmoid 0001159 1408 1161 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976166 264108 0.97253 0.98555 0.761924 24513 1 76 0.00331419 273 0 1.09599e+08 0.0272896 905563 1.11206e+08 1.28143e+07 24550 5.41203e+07 0 0.210607 0.98555 0.750914 1.09599e+08 0.00620457 2.36165e+07 1.03277e+07 2.36243e+07 288 2.40043e+07 1.64795e+07 0.00474562 2.4202e+07 50.205 0.00814313 0.994933 0 50.0082 GTEX-15ER7-2926-SM-7KUFK 2 C1 6 pieces; full thickness 6.4 Colon Colon - Transverse 0001157 1409 1161 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989053 213644 0.968695 0.991553 0.780863 24382 1 76 0.0031699 161 0 7.3165e+07 0.0309428 776803 7.37883e+07 6.31813e+06 24412 3.63875e+07 0 0.187832 0.991553 0.774267 7.3165e+07 0.00327663 1.58995e+07 7.58584e+06 1.6069e+07 170 1.61173e+07 1.12244e+07 0.00322313 1.60213e+07 49.8506 0.0105275 0.994053 0 50.2651 GTEX-15ER7-3026-SM-6M47W 1 C1 4 pieces; Purkinje cells well visualized, some with evidence of hypoxic damage 7.1 Brain Brain - Cerebellum 0002037 1411 1159 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993011 388008 0.944572 0.994395 0.734098 23563 1 76 0.00266237 154 0 7.4007e+07 0.0550143 852076 7.44241e+07 1.03331e+07 23590 3.68725e+07 0 0.210474 0.994395 0.729983 7.4007e+07 0.00342698 1.59618e+07 1.8477e+07 1.60532e+07 170 1.60727e+07 9.65368e+06 0.00304414 1.60387e+07 49.9471 0.0114489 0.995778 0 50.1426 GTEX-15ER7-3126-SM-7KUGH 1 C1 3 pieces 6.9 Brain Brain - Cortex 0001870 1414 1157 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.990069 513648 0.962024 0.993201 0.839119 23758 1 76 0.00307149 267 0 8.72992e+07 0.037568 4.46728e+06 8.78969e+07 7.57984e+06 23777 4.33951e+07 0 0.122905 0.993201 0.833414 8.72992e+07 0.00314001 1.9023e+07 2.20835e+07 1.9206e+07 284 1.91853e+07 9.93575e+06 0.00310565 1.92736e+07 50.1149 0.0508242 0.996333 0 50.2393 GTEX-15ER7-3126-SM-CYKUH 1 C1 3 pieces 6.9 Brain Brain - Cortex 0001870 1414 1157 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 RIP-Seq GTEX-15ER7-3226-SM-6LPIX 2 C1 2 pieces; predominantly adenohypophysis with small focus of neurohypophysis (marked) 7.2 Pituitary Pituitary 0000007 1415 1156 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991711 417337 0.94395 0.993807 0.711373 25091 1 76 0.00274085 129 0 6.77574e+07 0.0558163 470378 6.81796e+07 1.01222e+07 25121 3.37404e+07 0 0.232577 0.993807 0.706967 6.77574e+07 0.00363396 1.4346e+07 1.90175e+07 1.4367e+07 142 1.43769e+07 9.15092e+06 0.00318646 1.44711e+07 50.1634 0.0068991 0.995903 0 50.0367 GTEX-15ETS-0003-SM-6RBJE B1 Blood Whole Blood 0013756 1355 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15ETS-0003-SM-7DLGI B1 Blood Whole Blood 0013756 1355 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15ETS-0005-SM-9KNTJ B1 7.9 Blood Whole Blood 0013756 1355 BP-48809 RNA isolation_PAXgene Blood RNA (Manual) 01/28/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990996 849787 0.952041 0.992191 0.789646 20027 1 76 0.00324571 275 0 1.05983e+08 0.0472725 544732 1.06817e+08 1.25682e+07 20046 5.27968e+07 0 0.162394 0.992191 0.78348 1.05983e+08 0.00421498 2.29576e+07 7.03386e+07 2.31901e+07 258 2.32439e+07 2.05855e+07 0.00372976 2.30349e+07 49.7741 0.00509966 0.993387 0 50.2519 GTEX-15ETS-0008-SM-E8VNG B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 593 BP-48721 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.99215 484423 0.984152 0.993433 0.873984 19092 1 76 0.00136757 181 0 8.28603e+07 0.0155285 135139 8.3408e+07 3.99178e+06 19101 4.12912e+07 0 0.110169 0.993433 0.868244 8.28603e+07 0.00197099 1.87035e+07 7.50605e+06 1.88247e+07 176 1.885e+07 2.27438e+07 0.00166889 1.87818e+07 49.9094 0.00162022 0.994715 0 50.1615 GTEX-15ETS-0126-SM-7KUMW 0 B1 6 pieces, no dermal fat, squamous epithelium is ~50 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 416 697 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992074 183262 0.976463 0.993442 0.831474 23282 1 76 0.00301962 306 0 9.66488e+07 0.0233019 739484 9.72868e+07 6.07406e+06 23305 4.81405e+07 0 0.144989 0.993442 0.826021 9.66488e+07 0.00405439 2.1061e+07 1.02285e+07 2.1197e+07 295 2.12054e+07 1.69014e+07 0.00353629 2.11764e+07 49.9658 0.00760107 0.994809 0 50.1609 GTEX-15ETS-0326-SM-6PANH 0 B1 2 pieces, ~5-10% adherent/interstitial fat, rep. delineated 7.5 Muscle Muscle - Skeletal 0011907 437 676 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.98353 233682 0.983024 0.990124 0.879118 20805 1 76 0.00295772 387 0 1.14742e+08 0.0167253 1.57212e+06 1.15886e+08 1.37849e+07 20817 5.68843e+07 0 0.103905 0.990124 0.870436 1.14742e+08 0.00505407 2.48794e+07 1.3575e+07 2.48366e+07 340 2.50906e+07 2.23731e+07 0.00399891 2.53372e+07 50.2445 0.0135661 0.996717 0 49.9569 GTEX-15ETS-0426-SM-6PANI 0 B1 2 pieces, ~10% fascia, rep delineated 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 439 674 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979521 213131 0.976124 0.987421 0.803796 23600 1 76 0.00326347 378 0 1.06441e+08 0.0235868 822704 1.07797e+08 1.28659e+07 23633 5.2668e+07 0 0.172329 0.987421 0.793684 1.06441e+08 0.00577963 2.31988e+07 1.06754e+07 2.32398e+07 335 2.3589e+07 1.70538e+07 0.00451149 2.36555e+07 50.0704 0.00763195 0.99532 0 50.0441 GTEX-15ETS-0526-SM-6PAN3 1 B1 2 pieces, no abnormalities 6.5 Thyroid Thyroid 0002046 441 672 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979506 240332 0.964984 0.987013 0.736392 25916 1 76 0.00336262 375 0 1.15598e+08 0.0347544 580559 1.17119e+08 1.35561e+07 25970 5.71715e+07 0 0.228592 0.987013 0.726829 1.15598e+08 0.00570612 2.52508e+07 1.1163e+07 2.50801e+07 337 2.54258e+07 1.61732e+07 0.00452546 2.57368e+07 50.304 0.00495701 0.994521 0 49.8304 GTEX-15ETS-0626-SM-7KUMX 1 B1 2 pieces, ductal lobular elements present, rep delineated 7 Breast Breast - Mammary Tissue 0008367 456 657 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.99147 169703 0.972911 0.992933 0.80012 24863 1 76 0.00340642 210 0 8.82065e+07 0.0266986 629218 8.88344e+07 6.22416e+06 24891 4.39322e+07 0 0.172791 0.992933 0.794465 8.82065e+07 0.00405375 1.93302e+07 8.38019e+06 1.95022e+07 249 1.95088e+07 1.44836e+07 0.00372961 1.94446e+07 49.9177 0.00708305 0.994395 0 50.2215 GTEX-15ETS-0726-SM-6LPKL 1 B1 6 pieces, atherosis up to ~0.5mm 7.5 Blood Vessel Artery - Aorta 0001496 464 649 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991591 153735 0.980767 0.99389 0.852688 21242 1 76 0.0025405 133 0 6.3028e+07 0.0188678 275653 6.34154e+07 9.70653e+06 21256 3.13834e+07 0 0.128079 0.99389 0.847478 6.3028e+07 0.00353434 1.39251e+07 5.03683e+06 1.39038e+07 142 1.3914e+07 1.36078e+07 0.00303627 1.40503e+07 50.2438 0.00434678 0.99619 0 49.9618 GTEX-15ETS-1526-SM-6LPKM 1 B1 2 pieces, myometrium, no endoemetrium 7.6 Uterus Uterus 0000995 526 587 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991901 158789 0.971848 0.994124 0.800778 21910 1 76 0.00262598 131 0 6.13665e+07 0.0278566 189619 6.17292e+07 9.89328e+06 21928 3.05535e+07 0 0.17107 0.994124 0.796072 6.13665e+07 0.00354766 1.33947e+07 4.96435e+06 1.34009e+07 137 1.33959e+07 1.09366e+07 0.00308579 1.3528e+07 50.2452 0.00307179 0.996347 0 50.0116 GTEX-15ETS-1926-SM-7KUN5 1 B1 5 pieces, squamous mucosa up to~0.4mm 7.7 Esophagus Esophagus - Mucosa 0006920 541 572 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991399 288568 0.976712 0.993297 0.831791 23654 1 76 0.0033241 214 0 9.19545e+07 0.0229862 675693 9.25751e+07 6.71586e+06 23680 4.5784e+07 0 0.144922 0.993297 0.826215 9.19545e+07 0.0043552 2.05697e+07 1.07955e+07 2.07334e+07 253 2.07941e+07 1.7805e+07 0.00383866 2.06761e+07 49.8577 0.00729887 0.995194 0 50.1982 GTEX-15ETS-2026-SM-6AJBC 1 B1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 546 567 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.99191 164412 0.978335 0.994383 0.853012 21403 1 76 0.00187944 173 0 6.92661e+07 0.0213488 574667 6.96573e+07 5.19833e+06 21412 3.44823e+07 0 0.125324 0.994383 0.848221 6.92661e+07 0.00288586 1.49061e+07 6.73021e+06 1.50678e+07 179 1.50673e+07 1.26902e+07 0.0023814 1.5067e+07 49.9995 0.00824991 0.996857 0 50.2696 GTEX-15ETS-2326-SM-7KUGC 1 B1 "6 pieces, ~10% ""contaminant"" mucosa up to ~0.4mm, well preserved, use for LCM studies." 6.9 Colon Colon - Sigmoid 0001159 570 543 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987361 447540 0.974665 0.991378 0.834518 24815 1 76 0.00297596 294 0 1.26904e+08 0.0250134 782145 1.28008e+08 1.169e+07 24850 6.30177e+07 0 0.140148 0.991378 0.827323 1.26904e+08 0.00349289 2.74479e+07 1.16447e+07 2.77749e+07 327 2.79422e+07 2.3468e+07 0.00323338 2.77606e+07 49.837 0.00611014 0.995396 0 50.2961 GTEX-15ETS-2426-SM-6PANJ 0 B1 2 pieces, rim of adherent fat/fibrous tissue/peripheral nerve up to ~0.8mm, rep delineated 7.5 Blood Vessel Artery - Tibial 0007610 600 513 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980925 264471 0.972767 0.988093 0.812022 23782 1 76 0.00331735 289 0 1.12198e+08 0.0268368 641204 1.1355e+08 1.3485e+07 23812 5.5544e+07 0 0.160746 0.988093 0.802353 1.12198e+08 0.00553591 2.41733e+07 9.2712e+06 2.41549e+07 314 2.44689e+07 2.06246e+07 0.00441858 2.46232e+07 50.1571 0.00564688 0.995261 0 49.981 GTEX-15ETS-3126-SM-6LPKN 1 B1 2 pieces, no abnormalities 6.8 Spleen Spleen 0002106 113 1000 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991285 142075 0.961985 0.993563 0.758906 23505 1 76 0.00297186 123 0 6.13615e+07 0.0372084 860421 6.1759e+07 9.21175e+06 23530 3.05268e+07 0 0.203079 0.993563 0.754022 6.13615e+07 0.00394963 1.35027e+07 7.53675e+06 1.34432e+07 142 1.34322e+07 8.26279e+06 0.00345962 1.36459e+07 50.3947 0.0139319 0.995842 0 49.8895 GTEX-15ETS-5004-SM-AN43L B1 Muscle Muscle - Skeletal 0011907 438 ChIP-Seq GTEX-15EU6-0003-SM-6RBJQ B1 Blood Whole Blood 0013756 -84 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15EU6-0003-SM-7DLFZ B1 Blood Whole Blood 0013756 -84 BP-48807 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2014 LCSET-6363 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15EU6-0005-SM-7P8RJ B1 6.7 Blood Whole Blood 0013756 -84 BP-48809 RNA isolation_PAXgene Blood RNA (Manual) 01/28/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.918641 685044 0.961998 0.951124 0.816553 18459 1 76 0.00354427 121 0 8.64996e+07 0.0367033 403823 9.09446e+07 1.14766e+07 18464 4.16204e+07 0 0.145445 0.951124 0.776643 8.64996e+07 0.0103001 1.91312e+07 1.00235e+08 1.87989e+07 144 2.03676e+07 2.00691e+07 0.0068068 2.05204e+07 50.1869 0.00444032 0.983607 0 49.5619 GTEX-15EU6-0008-SM-E8VNH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 301 BP-48722 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.991646 667228 0.984159 0.993043 0.874261 20215 1 76 0.00142032 188 0 9.35816e+07 0.0155136 153539 9.42372e+07 4.7596e+06 20230 4.66198e+07 0 0.109897 0.993043 0.868179 9.35816e+07 0.00195482 2.11679e+07 8.5946e+06 2.12953e+07 202 2.13373e+07 2.60649e+07 0.0016872 2.12526e+07 49.9006 0.00162928 0.99444 0 50.15 GTEX-15EU6-0326-SM-6M48I 1 B1 2 pieces, all cortex 8.3 Adrenal Gland Adrenal Gland 0002369 286 518 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992208 126391 0.975859 0.993595 0.820774 22028 1 76 0.00252863 151 0 6.81744e+07 0.0237761 919100 6.86138e+07 9.73163e+06 22049 3.39866e+07 0 0.155084 0.993595 0.815517 6.81744e+07 0.00337483 1.51401e+07 7.66518e+06 1.5126e+07 166 1.51076e+07 1.08786e+07 0.00295114 1.52457e+07 50.2275 0.0133953 0.994982 0 49.9768 GTEX-15EU6-0426-SM-6PAN5 0 B1 6 pieces, minimal adherent fat; squamous epithelium is ~50 microns 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 290 514 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.984989 222285 0.974541 0.99034 0.825887 24820 1 76 0.00326196 413 0 1.22923e+08 0.0251245 498139 1.24122e+08 1.47143e+07 24851 6.09962e+07 0 0.148654 0.99034 0.817909 1.22923e+08 0.00508966 2.67715e+07 1.33502e+07 2.67396e+07 334 2.69925e+07 2.45309e+07 0.00417088 2.71585e+07 50.1533 0.00401331 0.995692 0 49.9702 GTEX-15EU6-0726-SM-7KUFU 0 B1 2 pieces, ~50% adherent venous/adipose nubbins up to ~2mm, delineated 7 Blood Vessel Artery - Tibial 0007610 312 492 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987119 224618 0.972089 0.991457 0.812901 22785 1 76 0.00287369 209 0 8.95124e+07 0.0275886 438450 9.02837e+07 7.35716e+06 22814 4.44324e+07 0 0.159187 0.991457 0.805957 8.95124e+07 0.00358776 1.90707e+07 7.05322e+06 1.92708e+07 254 1.93874e+07 1.6037e+07 0.00322916 1.93135e+07 49.9045 0.00485636 0.995796 0 50.261 GTEX-15EU6-1126-SM-68721 1 B1 2 pieces, adherent/interstitial fat is ~35-40%, delineated; Islets well visualized; rep encircled 6.2 Pancreas Pancreas 0001150 321 483 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5449 06/29/2014 TruSeq.v1 RNASEQ 0.989936 297952 0.969004 0.99076 0.824344 22368 1 76 0.0022989 126 0 8.2791e+07 0.0308091 167152 8.35631e+07 4.51885e+06 22392 4.12387e+07 0 0.144659 0.99076 0.816728 8.2791e+07 0.00293689 1.87541e+07 2.01807e+07 1.89483e+07 141 1.88804e+07 2.19311e+07 0.00261763 1.88976e+07 50.0229 0.00200031 0.991585 0 50.2575 GTEX-15EU6-1226-SM-6AJBE 1 B1 2 pieces, mild congestion/ prominent intrabronchial fibrinopurulent aggregates (delineated) 8 Lung Lung 0008952 323 481 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991909 179814 0.975351 0.994194 0.80513 23391 1 76 0.00217153 168 0 7.52811e+07 0.0243031 367879 7.57208e+07 5.19380e+06 23414 3.74808e+07 0 0.170221 0.994194 0.800455 7.52811e+07 0.00310225 1.66287e+07 7.18535e+06 1.67975e+07 177 1.67885e+07 1.3771e+07 0.00263582 1.67987e+07 50.0152 0.00485836 0.996479 0 50.2526 GTEX-15EU6-1326-SM-6PANG 1 B1 2 pieces, no abnormalities 8.2 Heart Heart - Atrial Appendage 0006631 328 476 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.984259 221887 0.976582 0.990391 0.827793 23284 1 76 0.00331295 270 0 1.20804e+08 0.0231373 1.38988e+06 1.21976e+08 1.39828e+07 23316 5.99154e+07 0 0.148789 0.990391 0.819839 1.20804e+08 0.00525317 2.58391e+07 1.93355e+07 2.58461e+07 324 2.59934e+07 2.00931e+07 0.00427705 2.63196e+07 50.3118 0.0113947 0.996523 0 50.0068 GTEX-15EU6-1426-SM-6M48E 1 B1 2 pieces, no abnormalities 6.8 Thyroid Thyroid 0002046 331 473 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994279 107717 0.971629 0.995585 0.787385 22472 1 76 0.00248415 136 0 6.55786e+07 0.0280662 145039 6.58694e+07 9.53078e+06 22497 3.2693e+07 0 0.184244 0.995585 0.783908 6.55786e+07 0.00324455 1.44655e+07 5.99908e+06 1.4478e+07 140 1.44825e+07 1.25182e+07 0.00286385 1.4537e+07 50.094 0.00220192 0.99689 0 50.0215 GTEX-15EU6-1526-SM-7KUGA 1 B1 6 pieces, confirmed target muscularis, adherent fibroadipose nubbins, rep delineated 7.3 Esophagus Esophagus - Muscularis 0004648 342 462 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989757 304146 0.976068 0.993004 0.849103 22606 1 76 0.00303992 220 0 8.55067e+07 0.0236034 544267 8.61091e+07 7.70266e+06 22620 4.25011e+07 0 0.126965 0.993004 0.843162 8.55067e+07 0.00312499 1.83578e+07 7.78858e+06 1.85506e+07 247 1.86412e+07 1.66015e+07 0.00308232 1.8524e+07 49.8423 0.00632067 0.99625 0 50.2612 GTEX-15EU6-1626-SM-6LPKF 1 B1 6 pieces, squamous mucosa is ~0.3mm, ~10-20% thickness; prominent submucosal mucus glands, rep delineated 9.7 Esophagus Esophagus - Mucosa 0006920 345 459 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991626 132767 0.976447 0.993532 0.829979 22276 1 76 0.00266084 134 0 6.22998e+07 0.0229739 180509 6.27054e+07 9.64632e+06 22292 3.10284e+07 0 0.146468 0.993532 0.824611 6.22998e+07 0.00347357 1.41024e+07 8.80576e+06 1.40227e+07 135 1.40377e+07 1.34341e+07 0.00306643 1.42032e+07 50.2929 0.00287868 0.995438 0 49.8584 GTEX-15EU6-1726-SM-6M48H 1 B1 2 pieces., minimal fascia/ vasular elements 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 347 457 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99461 126889 0.977272 0.995963 0.82396 22265 1 76 0.00238091 166 0 7.06398e+07 0.0224306 274604 7.09261e+07 9.97124e+06 22281 3.52235e+07 0 0.153311 0.995963 0.820634 7.06398e+07 0.00319398 1.56084e+07 6.36258e+06 1.56284e+07 168 1.56219e+07 1.31578e+07 0.0027869 1.57051e+07 50.1328 0.00387169 0.997317 0 50.032 GTEX-15EU6-1826-SM-7PC1W 2 B1 6 pieces, target lymphoid aggregates are ~5-10%, delineated 6.1 Small Intestine Small Intestine - Terminal Ileum 0001211 353 451 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985539 321378 0.973231 0.989571 0.829837 24571 1 76 0.00359634 275 0 9.75723e+07 0.0264455 659438 9.86006e+07 1.58985e+07 24595 4.83948e+07 0 0.143394 0.989571 0.821183 9.75723e+07 0.00506481 2.12685e+07 1.01042e+07 2.15494e+07 263 2.16653e+07 1.60995e+07 0.00432758 2.15288e+07 49.842 0.00668797 0.993603 0 50.3279 GTEX-15EU6-2226-SM-6EU2L 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 371 433 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5452 07/22/2014 TruSeq.v1 RNASEQ 0.989833 169061 0.972841 0.991268 0.805982 23233 1 76 0.00418243 150 0 6.76217e+07 0.026886 213952 6.82174e+07 6.61429e+06 23258 3.368e+07 0 0.166859 0.991268 0.798944 6.76217e+07 0.00413283 1.48857e+07 7.34796e+06 1.49219e+07 141 1.48952e+07 1.27455e+07 0.00415767 1.50079e+07 50.1884 0.00313633 0.992704 0 50.0608 GTEX-15EU6-2526-SM-7KUGB 3 B1 6 pieces, mucosa completely autolyzed/sloughed 7.8 Stomach Stomach 0000945 380 424 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984029 250281 0.979386 0.989983 0.858657 21602 1 76 0.00288774 145 0 6.84475e+07 0.0202697 277826 6.914e+07 5.92966e+06 21617 3.39345e+07 0 0.120729 0.989983 0.850056 6.84475e+07 0.00343633 1.48654e+07 6.15144e+06 1.50734e+07 158 1.52416e+07 1.4115e+07 0.00316038 1.50821e+07 49.737 0.00401831 0.995937 0 50.3474 GTEX-15EU6-2626-SM-7KUN4 1 B1 2 pieces glandular elements (delineated) are ~60-70% of tissue, rest is stroma/squamous mucosa 6.7 Salivary Gland Minor Salivary Gland 0006330 383 421 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990334 396059 0.972283 0.992385 0.782823 25631 1 76 0.00358631 212 0 9.95643e+07 0.0270705 393398 1.00328e+08 7.35034e+06 25664 4.95269e+07 0 0.18946 0.992385 0.776862 9.95643e+07 0.00465377 2.19366e+07 1.05905e+07 2.21518e+07 249 2.22183e+07 1.71998e+07 0.00411894 2.20661e+07 49.8281 0.00392111 0.994436 0 50.2441 GTEX-15EU6-5004-SM-AN43H B1 Muscle Muscle - Skeletal 0011907 307 ChIP-Seq GTEX-15EU6-5007-SM-AN43F B1 Heart Heart - Left Ventricle 0006566 333 ChIP-Seq GTEX-15F5U-0008-SM-E8VMZ B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 875 BP-48871 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10735,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.992202 919863 0.984107 0.993448 0.876426 21125 1 76 0.00155069 397 0 1.44762e+08 0.0155429 312390 1.45717e+08 7.87756e+06 21145 7.21388e+07 0 0.107681 0.993448 0.870684 1.44762e+08 0.00218803 3.28895e+07 1.3067e+07 3.30451e+07 346 3.3115e+07 3.97662e+07 0.00186896 3.29955e+07 49.9096 0.00214382 0.994695 0 50.118 GTEX-15F5U-0126-SM-6LPKA 2 B1 2 fragmented pieces; moderate congestion 6.9 Spleen Spleen 0002106 453 1040 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991654 147022 0.968614 0.993788 0.801002 22743 1 76 0.00290285 131 0 6.32288e+07 0.03061 522860 6.36241e+07 9.9048e+06 22763 3.14752e+07 0 0.167612 0.993788 0.796026 6.32288e+07 0.00376433 1.40233e+07 7.94911e+06 1.39936e+07 144 1.39969e+07 1.03217e+07 0.00333266 1.41473e+07 50.2671 0.00821796 0.995921 0 49.9471 GTEX-15F5U-0226-SM-6PANK 0 B1 6 pieces; no lesions; well trimmed 6 Blood Vessel Artery - Aorta 0001496 530 963 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976556 252054 0.974542 0.985411 0.835097 23055 1 76 0.00318449 277 0 1.03665e+08 0.0251208 457000 1.052e+08 1.22276e+07 23076 5.12167e+07 0 0.139445 0.985411 0.822914 1.03665e+08 0.00607387 2.22014e+07 1.14834e+07 2.22148e+07 281 2.2551e+07 1.90247e+07 0.0046162 2.27311e+07 50.1989 0.00434411 0.994266 0 50.0151 GTEX-15F5U-0926-SM-6LPKB 1 B1 6 pieces; submucosal glands comprise up to 10%; well dissected 9.4 Esophagus Esophagus - Mucosa 0006920 576 917 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.992009 182828 0.977068 0.993952 0.83799 21719 1 76 0.00252913 135 0 6.1228e+07 0.0224443 201336 6.16005e+07 9.46133e+06 21734 3.04968e+07 0 0.139079 0.993952 0.832921 6.1228e+07 0.00334566 1.39245e+07 8.07263e+06 1.38447e+07 134 1.38654e+07 1.34393e+07 0.0029366 1.40196e+07 50.2764 0.00326841 0.995895 0 49.8562 GTEX-15F5U-1426-SM-7KUN2 2 B1 6 pieces; all have mucosa (not target) as well as muscularis (target) LCM 5.7 Colon Colon - Sigmoid 0001159 603 890 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990083 273849 0.968285 0.991966 0.795238 25399 1 76 0.00333219 277 0 9.54569e+07 0.031357 755596 9.623e+07 6.81005e+06 25444 4.75063e+07 0 0.173047 0.991966 0.788849 9.54569e+07 0.00429674 2.08165e+07 1.29048e+07 2.10645e+07 300 2.10796e+07 1.43376e+07 0.00381355 2.09681e+07 49.8675 0.00785198 0.993849 0 50.296 GTEX-15F5U-1526-SM-6PANO 1 B1 6 pieces; 3 with subcutaneous fat and 1 0.9mm artery [circled]; up to 10% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 878 615 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980571 431370 0.965639 0.987587 0.756969 25273 1 76 0.00330452 348 0 1.12275e+08 0.034075 996405 1.13686e+08 1.28567e+07 25328 5.56085e+07 0 0.208669 0.987587 0.747573 1.12275e+08 0.00565668 2.41056e+07 1.68231e+07 2.40128e+07 320 2.43544e+07 1.80562e+07 0.00447225 2.45243e+07 50.1738 0.0087645 0.994603 0 49.9035 GTEX-15F5U-1826-SM-6LLJF 1 B1 2 pieces 7.5 Muscle Muscle - Skeletal 0011907 880 613 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.982513 244238 0.984184 0.98957 0.888562 19025 1 76 0.00221556 276 0 9.10637e+07 0.01552 607932 9.20235e+07 8.42672e+06 19032 4.51239e+07 0 0.0956226 0.98957 0.879294 9.10637e+07 0.00353355 1.96147e+07 9.52593e+06 1.96104e+07 263 1.9892e+07 2.08069e+07 0.00286986 1.99556e+07 50.0798 0.00660627 0.996627 0 49.9946 GTEX-15F5U-1926-SM-6PANL 1 B1 2 pieces; 20% internal and external fat 5.7 Nerve Nerve - Tibial 0001323 881 612 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976409 187956 0.969339 0.985298 0.794606 24542 1 76 0.00326043 233 0 9.74752e+07 0.0303132 523237 9.89296e+07 1.17913e+07 24585 4.81342e+07 0 0.174733 0.985298 0.782923 9.74752e+07 0.00605043 2.13237e+07 9.57799e+06 2.12497e+07 243 2.1581e+07 1.60853e+07 0.00464284 2.18366e+07 50.2944 0.00528898 0.994188 0 49.9131 GTEX-15F5U-1926-SM-DK2JV 1 B1 2 pieces; 20% internal and external fat Nerve Nerve - Tibial 0001323 881 612 BP-50439 DNA Extraction from Paxgene-derived Lysate Plate Based 03/12/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-15F5U-5003-SM-AN43O B1 Lung Lung 0008952 556 ChIP-Seq GTEX-15F5U-5010-SM-AHZ2D B1 7.9 Esophagus Esophagus - Mucosa 0006920 576 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.992967 623877 0.972991 0.994522 0.83526 23271 1 76 0.00174968 280 0 1.02035e+08 0.0265742 358765 1.02597e+08 3.65048e+06 23297 5.083e+07 0 0.137731 0.994522 0.830684 1.02035e+08 0.00253291 2.29764e+07 1.64245e+07 2.30588e+07 290 2.30721e+07 2.21309e+07 0.00214068 2.31218e+07 50.0539 0.00349682 0.996076 0 50.0895 GTEX-15FZZ-0008-SM-E8VNI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 420 BP-48872 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.991913 699006 0.983543 0.993299 0.87125 19749 1 76 0.00131166 230 0 9.75774e+07 0.0161266 137790 9.82357e+07 4.71516e+06 19763 4.86084e+07 0 0.112292 0.993299 0.865412 9.75774e+07 0.00197031 2.20114e+07 8.96223e+06 2.2134e+07 226 2.21773e+07 2.58423e+07 0.00164053 2.20981e+07 49.9105 0.00140265 0.994685 0 50.1388 GTEX-15FZZ-0226-SM-6LLI4 1 B1 2 pieces; moderate lymphocytic (Hashimoto) thyroiditis; 1 piece has 40% fibrofatty external content 6.1 Thyroid Thyroid 0002046 341 482 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.974085 215301 0.963901 0.983445 0.775732 25292 1 76 0.00315788 160 0 8.05649e+07 0.0340902 454445 8.19211e+07 7.0656e+06 25330 3.97173e+07 0 0.188169 0.983445 0.76289 8.05649e+07 0.0046576 1.75911e+07 1.48475e+07 1.7613e+07 196 1.78983e+07 1.07116e+07 0.0039006 1.80284e+07 50.181 0.00554735 0.992804 0 50.0311 GTEX-15FZZ-0326-SM-6M48O 1 B1 2 pieces; scattered foci of bronchopneumonia; mild emphysema; pigmented macrophages in alveoli and lymph nodule 7.9 Lung Lung 0008952 344 479 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993899 141575 0.973845 0.995362 0.792536 23332 1 76 0.00257898 141 0 6.71434e+07 0.0257692 402159 6.74563e+07 8.93396e+06 23355 3.34624e+07 0 0.181309 0.995362 0.788861 6.71434e+07 0.00355776 1.49354e+07 6.07374e+06 1.49839e+07 157 1.4963e+07 1.10695e+07 0.00306765 1.50522e+07 50.1486 0.00596177 0.996825 0 50.081 GTEX-15FZZ-0426-SM-6PANM 1 B1 6 pieces; no lesions; loose fibrous adventitia, 1mm thick 7.1 Blood Vessel Artery - Aorta 0001496 347 476 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977261 239454 0.972504 0.986243 0.815837 23638 1 76 0.0032276 281 0 1.06694e+08 0.0271288 365692 1.08182e+08 1.27495e+07 23672 5.26981e+07 0 0.156667 0.986243 0.804613 1.06694e+08 0.00604327 2.28436e+07 8.35346e+06 2.27691e+07 299 2.31334e+07 1.85613e+07 0.00462261 2.33981e+07 50.2844 0.00338033 0.995224 0 49.9183 GTEX-15FZZ-0526-SM-7KUGD 1 B1 6 pieces; well trimmed; minimal dermal fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 350 473 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986848 328195 0.967279 0.990851 0.761532 24650 1 76 0.00314089 234 0 9.52191e+07 0.0325202 536507 9.60982e+07 8.76625e+06 24683 4.72712e+07 0 0.205747 0.990851 0.754566 9.52191e+07 0.00368274 2.06339e+07 9.95529e+06 2.08806e+07 254 2.10277e+07 1.46998e+07 0.00341072 2.08485e+07 49.786 0.0055829 0.994855 0 50.2972 GTEX-15FZZ-0626-SM-7KFTO 1 B1 2 pieces 20 & 10% internal & external fat 6.6 Pancreas Pancreas 0001150 354 469 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993606 146430 0.977826 0.995207 0.853481 23163 1 76 0.00264832 203 0 1.03066e+08 0.0219318 319181 1.03562e+08 7.68742e+06 23189 5.13352e+07 0 0.124346 0.995207 0.849389 1.03066e+08 0.00269568 2.34594e+07 2.00922e+07 2.36991e+07 245 2.36772e+07 2.80177e+07 0.00267197 2.36452e+07 49.9663 0.00308201 0.996807 0 50.2542 GTEX-15FZZ-0726-SM-7KUFZ 0 B1 2 pieces; ductal and lobular units present; 1 piece has 40% fat, other has 80% fat 6.9 Breast Breast - Mammary Tissue 0008367 363 460 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985471 296886 0.966575 0.989098 0.772119 25943 1 76 0.00358169 277 0 9.48349e+07 0.0319899 466224 9.58801e+07 8.80156e+06 25987 4.70296e+07 0 0.194457 0.989098 0.763701 9.48349e+07 0.0037514 2.07153e+07 1.05641e+07 2.09602e+07 260 2.10873e+07 1.51001e+07 0.00366623 2.09123e+07 49.7917 0.00486257 0.992725 0 50.2939 GTEX-15FZZ-0826-SM-6LLJO 0 B1 2 pieces; corpora in various stages of development, largest has 4mm hemorrhage 6.5 Ovary Ovary 0000992 366 457 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975544 211831 0.960231 0.984573 0.68063 25556 1 76 0.00262026 138 0 8.06398e+07 0.0395439 308873 8.19033e+07 7.33429e+06 25612 3.98221e+07 0 0.279601 0.984573 0.67013 8.06398e+07 0.00409027 1.74919e+07 8.45188e+06 1.74424e+07 163 1.7689e+07 1.03894e+07 0.00334852 1.79428e+07 50.3562 0.00377119 0.993603 0 49.9291 GTEX-15FZZ-1026-SM-6AJBI 0 B1 2 pieces; only myometrium in these sections 8.4 Uterus Uterus 0000995 370 453 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991583 180862 0.973467 0.993881 0.822445 22481 1 76 0.00199831 175 0 7.26952e+07 0.0261682 175126 7.31428e+07 5.1739e+06 22495 3.61891e+07 0 0.151022 0.993881 0.817413 7.26952e+07 0.00290838 1.58007e+07 6.32302e+06 1.59493e+07 177 1.59485e+07 1.34271e+07 0.00245229 1.59572e+07 50.0136 0.0023943 0.996179 0 50.234 GTEX-15FZZ-1026-SM-DK2JM 0 B1 2 pieces; only myometrium in these sections Uterus Uterus 0000995 370 453 BP-50217 DNA Extraction from Paxgene-derived Lysate Plate Based 03/06/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-15FZZ-1026-SM-DLL3J 0 B1 2 pieces; only myometrium in these sections Uterus Uterus 0000995 370 453 BP-50217 DNA Extraction from Paxgene-derived Lysate Plate Based 03/06/2014 LCSET-10443 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-15FZZ-1126-SM-6AJBG 1 B1 6 pieces; well trimmed except for 2 pieces with 30% submucosa 8.2 Esophagus Esophagus - Muscularis 0004648 380 443 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.992163 207965 0.975588 0.994429 0.849139 22059 1 76 0.00186122 276 0 8.4451e+07 0.0241292 591602 8.49241e+07 6.07752e+06 22072 4.20547e+07 0 0.126449 0.994429 0.844408 8.4451e+07 0.0027618 1.793e+07 1.09864e+07 1.81211e+07 270 1.80733e+07 1.46338e+07 0.00231048 1.81452e+07 50.0992 0.00696625 0.996696 0 50.265 GTEX-15FZZ-1226-SM-7KUFV 1 B1 6 pieces; edematous lamina propria and submucosa 8.5 Esophagus Esophagus - Mucosa 0006920 378 445 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.98354 435415 0.976358 0.989644 0.860851 23231 1 76 0.0029971 284 0 1.02778e+08 0.0232861 726673 1.03854e+08 9.53151e+06 23246 5.09375e+07 0 0.115507 0.989644 0.851935 1.02778e+08 0.00314745 2.17285e+07 9.82662e+06 2.19997e+07 297 2.22302e+07 1.9447e+07 0.00307181 2.20606e+07 49.8085 0.00699709 0.995747 0 50.3101 GTEX-15FZZ-1326-SM-6PANN 1 B1 6 pieces; well trimmed except for 1 piece with 30% submucosa 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 382 441 BP-54027 RNA Extraction from Paxgene-derived Lysate Plate Based 06/17/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.98106 185520 0.972805 0.9884 0.828845 23971 1 76 0.00317903 288 0 1.02683e+08 0.0268497 617875 1.03888e+08 1.24234e+07 23996 5.08348e+07 0 0.14396 0.9884 0.81923 1.02683e+08 0.00552802 2.19992e+07 8.9937e+06 2.19601e+07 315 2.22284e+07 1.8203e+07 0.0043448 2.24342e+07 50.2304 0.00594749 0.995739 0 49.9556 GTEX-15FZZ-1826-SM-6LLJP 1 B1 6 pieces; 3 with and 3 without mucosa (target) 7.1 Colon Colon - Sigmoid 0001159 418 405 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976387 197038 0.968073 0.985346 0.765493 24840 1 76 0.00243211 170 0 8.18281e+07 0.0316417 837191 8.30451e+07 7.07197e+06 24881 4.04319e+07 0 0.20258 0.985346 0.754275 8.18281e+07 0.00386202 1.80504e+07 9.81057e+06 1.79901e+07 201 1.82687e+07 1.14541e+07 0.00314057 1.84663e+07 50.2689 0.0100812 0.994304 0 49.9163 GTEX-15FZZ-1926-SM-7KFTQ 1 B1 2 pieces; external fat comprises 80% 6.9 Nerve Nerve - Tibial 0001323 415 408 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993618 164386 0.964763 0.994626 0.75542 25704 1 76 0.00288915 219 0 1.00329e+08 0.0349578 482902 1.00871e+08 7.27324e+06 25752 4.99831e+07 0 0.209342 0.994626 0.75136 1.00329e+08 0.00258937 2.18959e+07 1.0646e+07 2.2084e+07 251 2.20711e+07 1.4758e+07 0.00273942 2.2007e+07 49.9272 0.00478732 0.995633 0 50.2139 GTEX-15FZZ-5001-SM-AN44G B1 Lung Lung 0008952 345 ChIP-Seq GTEX-15G19-0001-SM-6RBJJ C1 Blood Whole Blood 0013756 499 BP-48942 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15G19-0001-SM-7J38Q C1 Blood Whole Blood 0013756 499 BP-48942 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15G19-0006-SM-9KNW6 C1 8.5 Blood Whole Blood 0013756 499 BP-48944 RNA isolation_PAXgene Blood RNA (Manual) 01/31/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.973194 901080 0.95784 0.974524 0.768363 19246 1 76 0.00269745 110 0 8.7827e+07 0.0414257 125269 9.01231e+07 1.0327e+07 19260 4.37242e+07 0 0.189477 0.974524 0.748788 8.7827e+07 0.00415978 2.00313e+07 1.33863e+08 2.02085e+07 136 2.02601e+07 2.0813e+07 0.00342762 2.01368e+07 49.8474 0.00138998 0.975853 0 50.2203 GTEX-15G19-0011-R10a-SM-AHZNN C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 509 ChIP-Seq GTEX-15G19-0011-R10b-SM-7KUG4 C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 509 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988827 1.1359e+06 0.949552 0.992195 0.821952 24440 1 76 0.00320859 269 0 9.29299e+07 0.0499631 4.3937e+06 9.3661e+07 8.89043e+06 24465 4.61708e+07 0 0.1276 0.992195 0.815537 9.29299e+07 0.00301409 1.99876e+07 2.53964e+07 2.02763e+07 289 2.03584e+07 1.21588e+07 0.00311167 2.02006e+07 49.8054 0.0469107 0.995563 0 50.3586 GTEX-15G19-0011-R11b-SM-6LPIH C1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 509 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991072 379659 0.940772 0.993165 0.730489 23047 1 76 0.00283276 126 0 6.52772e+07 0.0587999 1.44572e+06 6.57264e+07 9.73613e+06 23075 3.24872e+07 0 0.210283 0.993165 0.725496 6.52772e+07 0.00362003 1.40653e+07 1.19357e+07 1.39838e+07 146 1.40031e+07 7.93515e+06 0.00322557 1.41703e+07 50.2967 0.021996 0.995258 0 49.8547 GTEX-15G19-0011-R3a-SM-6LPIG C1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 509 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991489 529038 0.957207 0.993713 0.836274 22158 1 76 0.00251743 263 0 7.00006e+07 0.0426252 8.6895e+06 7.04435e+07 1.03115e+07 22169 3.48683e+07 0 0.120934 0.993713 0.831016 7.00006e+07 0.00343185 1.53164e+07 2.58586e+07 1.53302e+07 278 1.51149e+07 4.68766e+06 0.00297362 1.56852e+07 50.9258 0.123354 0.995937 0 50.0225 GTEX-15G19-0011-R5b-SM-6M46P C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 509 BP-50568 RNA isolation_PAXgene Tissue miRNA 03/17/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993702 783265 0.944819 0.995219 0.768758 25059 1 76 0.00246782 200 0 7.71082e+07 0.0548945 4.1324e+06 7.74786e+07 1.0475e+07 25089 3.84185e+07 0 0.176061 0.995219 0.765083 7.71082e+07 0.00343499 1.66717e+07 2.49791e+07 1.6736e+07 212 1.66819e+07 8.81959e+06 0.00295067 1.68464e+07 50.2452 0.053336 0.996737 0 50.0962 GTEX-15G19-0011-R6b-SM-7KUM3 C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 509 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989943 685853 0.960882 0.992087 0.816383 24014 1 76 0.00345016 370 0 9.82813e+07 0.0389617 1.33089e+07 9.90652e+07 7.41932e+06 24029 4.89133e+07 0 0.144499 0.992087 0.809923 9.82813e+07 0.00416912 2.10318e+07 3.75831e+07 2.17875e+07 339 2.16172e+07 7.22833e+06 0.00380886 2.13686e+07 49.7109 0.134345 0.994231 0 50.8824 GTEX-15G19-0011-R7b-SM-6M479 C1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 509 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994432 629481 0.95699 0.995964 0.828376 21529 1 76 0.00230626 193 0 6.88e+07 0.0428453 8.18594e+06 6.90789e+07 9.6959e+06 21539 3.4302e+07 0 0.128613 0.995964 0.825033 6.88e+07 0.00329188 1.49659e+07 2.82742e+07 1.51683e+07 250 1.49445e+07 5.42407e+06 0.00279831 1.52941e+07 50.5781 0.118501 0.997496 0 50.3358 GTEX-15G19-0011-R8b-SM-7KUL1 C1, A1 6.3 Brain Brain - Hypothalamus 0001898 509 BP-53429 RNA isolation_PAXgene Tissue miRNA 06/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990808 807064 0.954171 0.993092 0.827652 23598 1 76 0.00338459 268 0 8.44356e+07 0.0455953 1.05088e+07 8.5023e+07 6.30487e+06 23619 4.20149e+07 0 0.12652 0.993092 0.821934 8.44356e+07 0.00410861 1.81196e+07 3.2713e+07 1.87559e+07 315 1.8629e+07 8.05121e+06 0.00374577 1.84314e+07 49.7333 0.1236 0.995376 0 50.8627 GTEX-15G19-0011-R9b-SM-7KUEE C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 509 BP-50658 RNA isolation_PAXgene Tissue miRNA 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.98497 734951 0.960006 0.9905 0.817488 23358 1 76 0.00307857 291 0 8.90047e+07 0.0396372 5.19093e+06 8.98583e+07 8.02667e+06 23382 4.41164e+07 0 0.142518 0.9905 0.809722 8.90047e+07 0.00338565 1.96229e+07 1.73973e+07 1.98714e+07 286 2.00289e+07 1.26545e+07 0.00323125 1.99352e+07 49.8828 0.0577679 0.996031 0 50.3147 GTEX-15G19-0126-SM-6PANQ 0 C1 6 pieces; minimal internal (periadnexal) fat; squamous epithelium is up to ~30um 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 589 687 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981986 216265 0.975751 0.988622 0.819339 25320 1 76 0.00314714 407 0 1.24756e+08 0.0239339 633495 1.26192e+08 1.3771e+07 25356 6.17772e+07 0 0.156412 0.988622 0.810017 1.24756e+08 0.00531546 2.70183e+07 1.31709e+07 2.70047e+07 347 2.7339e+07 2.30395e+07 0.00422402 2.74934e+07 50.1408 0.00502009 0.995258 0 49.9873 GTEX-15G19-0226-SM-6PAL2 0 C1 2 pieces; ~10%fascia/vascular elements and nerves (outlined) 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 592 684 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976692 249880 0.97562 0.98559 0.789719 24478 1 76 0.00332352 277 0 1.08893e+08 0.024051 699862 1.10485e+08 1.28629e+07 24520 5.37813e+07 0 0.185901 0.98559 0.778339 1.08893e+08 0.00612888 2.39548e+07 1.06407e+07 2.38491e+07 268 2.42871e+07 1.9293e+07 0.00471354 2.44602e+07 50.1775 0.00633443 0.994488 0 49.8894 GTEX-15G19-0326-SM-7KUGF 0 C1 2 pieces; one piece with adherent fat up to 1mm 6.5 Nerve Nerve - Tibial 0001323 597 680 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988307 296824 0.969958 0.991813 0.754452 24498 1 76 0.00333031 280 0 9.76427e+07 0.0297501 406386 9.84487e+07 8.99828e+06 24540 4.84896e+07 0 0.215506 0.991813 0.748275 9.76427e+07 0.00333388 2.13236e+07 1.00315e+07 2.16304e+07 261 2.17741e+07 1.59743e+07 0.00333209 2.15118e+07 49.6969 0.00412789 0.995319 0 50.3571 GTEX-15G19-0526-SM-6PAMT 0 C1 2 pieces; ~10% internal fat 7.9 Muscle Muscle - Skeletal 0011907 601 676 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.983334 256018 0.982251 0.989705 0.865374 20959 1 76 0.00306909 277 0 1.13044e+08 0.0175158 1.89260e+06 1.1422e+08 1.33159e+07 20981 5.60621e+07 0 0.116877 0.989705 0.856465 1.13044e+08 0.00521307 2.47327e+07 1.18545e+07 2.46567e+07 310 2.5025e+07 2.39229e+07 0.00413418 2.50717e+07 50.0466 0.0165699 0.996077 0 49.923 GTEX-15G19-0626-SM-6M474 2 C1 2 pieces; mild interstitial fibrosis 6.4 Thyroid Thyroid 0002046 627 651 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.991379 115449 0.967006 0.992998 0.761864 23477 1 76 0.0026743 134 0 6.31189e+07 0.0326796 629885 6.3564e+07 8.76697e+06 23503 3.14382e+07 0 0.205142 0.992998 0.75653 6.31189e+07 0.00371678 1.38509e+07 7.4756e+06 1.3901e+07 140 1.39036e+07 1.03969e+07 0.00319469 1.39482e+07 50.08 0.00990947 0.994616 0 50.0902 GTEX-15G19-0726-SM-CYKSQ 2 C1 2 pieces; marked congestion; sloughing bronchial epithelium; collapsed alveolar spaces with many alveolar macrophages 5.6 Lung Lung 0008952 629 650 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 RIP-Seq GTEX-15G19-1026-SM-6PALM 1 C1 6 pieces; atheromatous change with calcification (outlined) 6 Blood Vessel Artery - Aorta 0001496 644 636 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.973631 224315 0.96985 0.982808 0.697231 25113 1 76 0.00375924 208 0 1.09316e+08 0.0298225 816701 1.11229e+08 1.29804e+07 25174 5.38956e+07 0 0.27262 0.982808 0.685244 1.09316e+08 0.0066283 2.38266e+07 1.15942e+07 2.37255e+07 222 2.41806e+07 1.55398e+07 0.00518037 2.43528e+07 50.1774 0.00734255 0.991986 0 49.8938 GTEX-15G19-1126-SM-7KUEL 1 C1 2 pieces; septal inflammation with histiocytes and fat necrosis (outlined) 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 649 631 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987105 272037 0.972808 0.990327 0.781598 23414 1 76 0.00348641 163 0 7.68577e+07 0.0268082 774675 7.76083e+07 7.14594e+06 23438 3.81609e+07 0 0.19121 0.990327 0.774038 7.68577e+07 0.00346776 1.68595e+07 1.12812e+07 1.71191e+07 173 1.72354e+07 1.29997e+07 0.00347712 1.69873e+07 49.6374 0.00998185 0.99355 0 50.3821 GTEX-15G19-1326-SM-6LPIR 2 C1 2 pieces; spermatogenesis present; congestion 6.1 Testis Testis 0000473 652 629 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991375 225816 0.921233 0.993355 0.724006 31288 1 76 0.00266147 120 0 5.83796e+07 0.0784322 556110 5.87702e+07 8.88719e+06 31338 2.908e+07 0 0.197227 0.993355 0.719194 5.83796e+07 0.00352606 1.19571e+07 1.26924e+07 1.194e+07 116 1.1963e+07 9.56152e+06 0.0030929 1.20372e+07 50.1544 0.00946245 0.995335 0 49.9643 GTEX-15G19-1526-SM-6LPKP 2 C1 6 pieces; full thickness sections with mucosa up to 0.8mm, sloughing surface epithelium, moderate autolysis 5.8 Stomach Stomach 0000945 655 627 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991961 115587 0.976024 0.993846 0.790519 23430 1 76 0.0025988 191 0 7.1152e+07 0.0236846 2.44623e+06 7.15925e+07 1.04376e+07 23458 3.54389e+07 0 0.185504 0.993846 0.785655 7.1152e+07 0.00333084 1.60254e+07 1.48268e+07 1.6021e+07 178 1.59925e+07 1.13553e+07 0.00296413 1.61821e+07 50.2947 0.0341688 0.995731 0 49.993 GTEX-15G19-2126-SM-6M48J 1 C1 2 pieces; mainly adipose tissue and ~ 10% fibrovascular component, no ductal elements identified, detached fragment of skeletal muscle 6.1 Breast Breast - Mammary Tissue 0008367 670 614 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993116 88423 0.979629 0.994588 0.827719 22247 1 76 0.00242079 138 0 5.85513e+07 0.0200695 372818 5.88698e+07 7.95215e+06 22258 2.91779e+07 0 0.151909 0.994588 0.82324 5.85513e+07 0.00345048 1.29913e+07 6.30025e+06 1.29888e+07 139 1.29656e+07 1.18201e+07 0.00293487 1.31036e+07 50.2648 0.00633292 0.996061 0 49.9952 GTEX-15G19-2426-SM-7KUMR 1 C1 6 pieces; hair bearing skin with minimal internal and external fat; squamous epithelium up to ~0.36um 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 676 610 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990543 327663 0.975957 0.992395 0.832126 24065 1 76 0.00344141 280 0 9.86822e+07 0.0238101 570635 9.94384e+07 7.54173e+06 24094 4.91095e+07 0 0.143831 0.992395 0.825798 9.86822e+07 0.00438601 2.17002e+07 1.2005e+07 2.19145e+07 281 2.19423e+07 1.79552e+07 0.00391283 2.18556e+07 49.9011 0.00573858 0.994247 0 50.2456 GTEX-15G19-2726-SM-6LPKG 1 C1 6 pieces; target muscularis and attached fibrovascular tissue up to 0.6mm 6.4 Colon Colon - Sigmoid 0001159 683 604 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991234 107485 0.965835 0.99343 0.775821 22565 1 76 0.00268343 121 0 5.66134e+07 0.0339742 1.02551e+06 5.69878e+07 8.72276e+06 22582 2.8173e+07 0 0.190014 0.99343 0.770725 5.66134e+07 0.00368706 1.22556e+07 6.01752e+06 1.22035e+07 133 1.21723e+07 8.39566e+06 0.00318413 1.24037e+07 50.4707 0.0179953 0.995627 0 49.8934 GTEX-15G19-2826-SM-6M48K 2 C1 4 pieces; mild to moderate autolysis 7.3 Brain Brain - Cerebellum 0002037 687 609 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992557 420929 0.931982 0.993995 0.694352 23828 1 76 0.00269874 127 0 7.33463e+07 0.0676919 1.46709e+06 7.37894e+07 1.02749e+07 23856 3.65375e+07 0 0.23763 0.993995 0.690183 7.33463e+07 0.00346191 1.56139e+07 2.07025e+07 1.57098e+07 164 1.57128e+07 8.22368e+06 0.00307978 1.57068e+07 49.9904 0.0198821 0.995433 0 50.1531 GTEX-15G19-2926-SM-7KUFL 2 C1 4 pieces; mild to moderate autolysis 6.5 Brain Brain - Cortex 0001870 689 608 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.99 295241 0.967218 0.992793 0.841834 23888 1 76 0.00297218 268 0 8.50233e+07 0.0324652 4.90795e+06 8.56405e+07 7.44497e+06 23901 4.22893e+07 0 0.125383 0.992793 0.835767 8.50233e+07 0.00318355 1.87986e+07 1.12361e+07 1.88307e+07 274 1.88839e+07 1.03141e+07 0.00307757 1.89502e+07 50.0876 0.0573088 0.995585 0 50.0426 GTEX-15G19-2926-SM-CYKUE 2 C1 4 pieces; mild to moderate autolysis 6.5 Brain Brain - Cortex 0001870 689 608 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 RIP-Seq GTEX-15G19-3026-SM-6LPJP 2 C1 1 piece; mostly adenohypophysis 6 Pituitary Pituitary 0000007 690 607 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991559 436388 0.945037 0.993696 0.72764 25182 1 76 0.00279263 133 0 7.05891e+07 0.0547473 710453 7.1037e+07 1.16462e+07 25218 3.51436e+07 0 0.217397 0.993696 0.723052 7.05891e+07 0.00360936 1.5087e+07 1.97128e+07 1.51111e+07 149 1.51266e+07 1.00451e+07 0.00320012 1.52133e+07 50.143 0.0100012 0.995833 0 50.0399 GTEX-15G1A-0001-SM-6RBJD B1 Blood Whole Blood 0013756 -126 BP-48942 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15G1A-0001-SM-7J38P B1 Blood Whole Blood 0013756 -126 BP-48942 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15G1A-0006-SM-7PC1Z B1 7 Blood Whole Blood 0013756 -126 BP-48944 RNA isolation_PAXgene Blood RNA (Manual) 01/31/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989253 590707 0.96605 0.991798 0.853407 18279 1 76 0.00325313 162 0 8.54564e+07 0.0337229 421669 8.61631e+07 1.38868e+07 18285 4.24987e+07 0 0.112643 0.991798 0.846407 8.54564e+07 0.00436888 1.88456e+07 3.7008e+07 1.90145e+07 180 1.91009e+07 1.8929e+07 0.00380957 1.89794e+07 49.8405 0.00489385 0.994342 0 50.2231 GTEX-15G1A-0008-SM-E76Q5 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 252 BP-48908 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99358 732563 0.981345 0.995033 0.857681 21260 1 76 0.00155027 289 0 1.16302e+08 0.0183468 343677 1.16883e+08 7.24344e+06 21285 5.79391e+07 0 0.123664 0.995033 0.85342 1.16302e+08 0.00222028 2.62200e+07 1.28884e+07 2.63335e+07 304 2.65124e+07 3.12734e+07 0.00188478 2.62044e+07 49.7079 0.00294035 0.996486 0 50.108 GTEX-15G1A-0326-SM-6M467 1 B1 2 pieces, incidental 1.5mm adenoma, delineated 7.2 Thyroid Thyroid 0002046 62 1160 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994583 116800 0.972937 0.995995 0.821668 22900 1 76 0.0023539 158 0 7.10676e+07 0.0268399 435708 7.13534e+07 9.95974e+06 22924 3.54349e+07 0 0.151269 0.995995 0.818378 7.10676e+07 0.00332214 1.56598e+07 6.76151e+06 1.57565e+07 174 1.5697e+07 1.18117e+07 0.00283733 1.58128e+07 50.1837 0.00610634 0.997408 0 50.154 GTEX-15G1A-0426-SM-6M468 1 B1 2 pieces, acute pneumonia/bronchitis, rep active foci delineated. 9 Lung Lung 0008952 67 1155 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994795 148015 0.979883 0.996059 0.838657 22376 1 76 0.00234256 167 0 7.45595e+07 0.019796 305312 7.48545e+07 9.84535e+06 22395 3.71784e+07 0 0.141226 0.996059 0.835352 7.45595e+07 0.00316659 1.66652e+07 6.18599e+06 1.67247e+07 173 1.67165e+07 1.5381e+07 0.00275405 1.67654e+07 50.073 0.00407874 0.997324 0 50.0891 GTEX-15G1A-0526-SM-7KUKM 1 B1 4 pieces, confirmed target muscularis 8.8 Esophagus Esophagus - Muscularis 0004648 73 1149 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992065 265987 0.981208 0.994116 0.876528 21104 1 76 0.00333168 174 0 7.1936e+07 0.0184831 612336 7.23618e+07 5.51408e+06 21113 3.58081e+07 0 0.104679 0.994116 0.87137 7.1936e+07 0.00407365 1.57244e+07 6.37784e+06 1.59194e+07 174 1.59368e+07 1.47771e+07 0.0037019 1.58453e+07 49.8561 0.00846215 0.996167 0 50.3081 GTEX-15G1A-1226-SM-7KUF3 1 B1 6 pieces, mucosa generally well- preserved, foci ischemic damage/gastritis, delineated. Mucosa is ~25% thickness 6.8 Stomach Stomach 0000945 93 1129 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987038 204905 0.979476 0.99068 0.861384 22663 1 76 0.00285989 211 0 8.22949e+07 0.0203149 1.09265e+06 8.30692e+07 7.24208e+06 22677 4.08746e+07 0 0.118092 0.99068 0.853356 8.22949e+07 0.00352299 1.81311e+07 8.43762e+06 1.83431e+07 230 1.83899e+07 1.53449e+07 0.00319022 1.83683e+07 49.9706 0.0131535 0.994321 0 50.2906 GTEX-15G1A-1526-SM-7KUMM 1 B1 2 pieces, spermatogenesis appears reduced 6.8 Testis Testis 0000473 100 1122 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990752 349588 0.955084 0.99273 0.774537 29921 1 76 0.00352839 205 0 9.27828e+07 0.0446422 1.24056e+06 9.34623e+07 7.0857e+06 29978 4.61925e+07 0 0.180547 0.99273 0.768906 9.27828e+07 0.00396787 2.01025e+07 1.12869e+07 2.02712e+07 249 2.0378e+07 1.5551e+07 0.00374769 2.01634e+07 49.7354 0.0132734 0.994707 0 50.2089 GTEX-15G1A-1626-SM-7KUKN 0 B1 6 pieces, minimal adherent fat. Squamous epithelium is ~60 microns 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 102 1120 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991563 391574 0.976502 0.993551 0.833536 23515 1 76 0.00320313 282 0 9.97877e+07 0.0232894 1.00199e+06 1.00435e+08 6.80798e+06 23541 4.96757e+07 0 0.142966 0.993551 0.828161 9.97877e+07 0.00441521 2.20902e+07 1.24802e+07 2.23394e+07 302 2.23611e+07 1.77893e+07 0.00380796 2.22604e+07 49.8871 0.00997651 0.99554 0 50.2805 GTEX-15G1A-1726-SM-6LPI4 1 B1 4 pieces, well preserved mucosa, ~5% lymphoid elements. Use for LCM studies 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 105 1117 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991128 139632 0.976536 0.993358 0.815801 22688 1 76 0.00278097 152 0 7.01295e+07 0.0229464 814972 7.05984e+07 1.12773e+07 22711 3.49179e+07 0 0.160735 0.993358 0.810382 7.01295e+07 0.00363033 1.58241e+07 9.48798e+06 1.56836e+07 162 1.56729e+07 1.22213e+07 0.00320469 1.59823e+07 50.4887 0.0115438 0.995587 0 49.7771 GTEX-15G1A-1826-SM-7KUKO 1 B1 6 pieces, mucosa remarkably well preserved, 0.4mm, ~10% thickness 8.4 Colon Colon - Transverse 0001157 108 1114 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992443 351391 0.979394 0.99407 0.853739 23494 1 76 0.00336464 283 0 1.1167e+08 0.0203486 1.03691e+06 1.12337e+08 8.39208e+06 23516 5.56207e+07 0 0.125655 0.99407 0.848676 1.1167e+08 0.00396936 2.44532e+07 1.17589e+07 2.47947e+07 323 2.48216e+07 2.12641e+07 0.00366651 2.46e+07 49.7758 0.00923036 0.995697 0 50.3468 GTEX-15G1A-1926-SM-7KUFF 1 B1 6 pieces, confirmed target muscularis 6.5 Colon Colon - Sigmoid 0001159 112 1110 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679,LCSET-7010,LCSET-7087 04/25/2015 TruSeq.v1 RNASEQ 0.99387 389976 0.978555 0.994821 0.856356 22997 1 76 0.00382351 286 0 1.18691e+08 0.0211474 985007 1.19308e+08 1.61422e+07 23017 5.91486e+07 0 0.122199 0.994821 0.851921 1.18691e+08 0.00260243 2.5478e+07 1.13148e+07 2.62105e+07 308 2.6205e+07 2.3067e+07 0.00321355 2.559e+07 49.4063 0.00825597 0.995772 0 50.7086 GTEX-15G1A-2026-SM-7KUFG 0 B1 2 pieces, only trace interstitial fat 6.8 Muscle Muscle - Skeletal 0011907 249 973 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.990223 411223 0.981197 0.993019 0.877396 21434 1 76 0.00269055 306 0 1.14094e+08 0.0184761 490773 1.14896e+08 9.20074e+06 21450 5.67579e+07 0 0.103801 0.993019 0.871271 1.14094e+08 0.00319587 2.48197e+07 1.36741e+07 2.51106e+07 322 2.5278e+07 2.56296e+07 0.0029425 2.49446e+07 49.6681 0.00427145 0.995815 0 50.2914 GTEX-15G1A-2326-SM-6PAMJ 0 B1 2 pieces, minimal atherosis or adherent fat. Prominent Monckeberg medial sclerosis, rep delineated 5.9 Blood Vessel Artery - Tibial 0007610 258 964 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977601 237463 0.978176 0.986723 0.867368 22019 1 76 0.00305408 212 0 9.93421e+07 0.0214883 326483 1.00679e+08 1.11279e+07 22035 4.90845e+07 0 0.110808 0.986723 0.855852 9.93421e+07 0.0060204 2.14488e+07 8.03566e+06 2.14034e+07 255 2.1725e+07 2.0634e+07 0.00452353 2.19831e+07 50.2952 0.00324282 0.995845 0 49.947 GTEX-15RIE-0004-SM-6RBKY B1 Blood Whole Blood 0013756 -47 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15RIE-0004-SM-6UH2C B1 Blood Whole Blood 0013756 -47 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15RIE-0006-SM-7MKF8 B1 9.2 Blood Whole Blood 0013756 -47 BP-49273 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.966944 739401 0.968384 0.972048 0.826393 18702 1 76 0.00359931 126 0 8.90561e+07 0.0308405 346133 9.1617e+07 1.28303e+07 18708 4.41512e+07 0 0.14199 0.972048 0.803294 8.90561e+07 0.00504269 2.04585e+07 1.1382e+08 2.03834e+07 151 2.05971e+07 2.28346e+07 0.00431721 2.07231e+07 50.1525 0.00377804 0.977151 0 49.9081 GTEX-15RIE-0008-SM-EAZCH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 374 BP-49333 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992898 461668 0.980768 0.993969 0.854481 20830 1 76 0.00167725 215 0 9.08067e+07 0.018887 314373 9.13576e+07 7.0606e+06 20852 4.52572e+07 0 0.126287 0.993969 0.849328 9.08067e+07 0.00272032 2.04326e+07 9.75772e+06 2.05327e+07 205 2.05453e+07 2.37825e+07 0.00219822 2.05169e+07 49.9654 0.00344113 0.995041 0 50.1221 GTEX-15RIE-0126-SM-7KUF8 1 B1 2 pieces, ~15% fascia/vascular elements 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 218 561 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987776 236717 0.975558 0.99203 0.822065 23134 1 76 0.00284605 164 0 7.7661e+07 0.0241443 489016 7.82849e+07 6.74381e+06 23156 3.85729e+07 0 0.153494 0.99203 0.815513 7.7661e+07 0.00335669 1.70355e+07 7.18e+06 1.71869e+07 192 1.73451e+07 1.49611e+07 0.00310027 1.71893e+07 49.7744 0.00624662 0.996285 0 50.2211 GTEX-15RIE-0326-SM-6PAMC 1 B1 2 pieces, mild congestion 7.6 Lung Lung 0008952 228 551 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981511 212749 0.970748 0.988327 0.765413 25291 1 76 0.00327976 210 0 9.6669e+07 0.0289749 337725 9.78107e+07 1.183e+07 25337 4.78867e+07 0 0.205334 0.988327 0.756479 9.6669e+07 0.00552214 2.13176e+07 8.63748e+06 2.12772e+07 231 2.15613e+07 1.58907e+07 0.00439322 2.16789e+07 50.136 0.00345284 0.995142 0 49.9526 GTEX-15RIE-0426-SM-7KUMH 1 B1 2 pieces, no abnormalities 7.5 Thyroid Thyroid 0002046 231 548 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990908 484210 0.965908 0.993097 0.777504 25200 1 76 0.00330488 276 0 1.04189e+08 0.0337715 432748 1.04913e+08 7.57945e+06 25247 5.18428e+07 0 0.188403 0.993097 0.772137 1.04189e+08 0.00434465 2.27382e+07 1.12219e+07 2.29222e+07 266 2.30414e+07 1.84153e+07 0.00382362 2.28401e+07 49.7806 0.00412482 0.995286 0 50.2016 GTEX-15RIE-0526-SM-7KUF9 1 B1 4 pieces, target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 236 543 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985987 202039 0.975942 0.989117 0.84264 22484 1 76 0.00304898 213 0 8.51208e+07 0.0237227 1.04852e+06 8.60573e+07 7.79924e+06 22506 4.23122e+07 0 0.133301 0.989117 0.83347 8.51208e+07 0.00296637 1.84559e+07 7.25902e+06 1.86696e+07 255 1.8757e+07 1.56277e+07 0.00300781 1.8616e+07 49.8113 0.012184 0.992247 0 50.2879 GTEX-15RIE-0626-SM-6M47G 1 B1 2 pieces, spermatogenesis is present 7.4 Testis Testis 0000473 240 539 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993282 219501 0.9412 0.99455 0.752833 31481 1 76 0.00239693 140 0 7.11566e+07 0.0584807 719783 7.15465e+07 8.82546e+06 31524 3.54762e+07 0 0.188367 0.99455 0.748731 7.11566e+07 0.00317961 1.51223e+07 9.31226e+06 1.51025e+07 147 1.5144e+07 1.223e+07 0.00278777 1.51617e+07 50.0292 0.0100603 0.995819 0 49.9671 GTEX-15RIE-0726-SM-7KUMI 1 B1 6 pieces, muscularis; switched with 0825 8.6 Esophagus Esophagus - Muscularis 0004648 252 527 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678,LCSET-7010 04/01/2015 TruSeq.v1 RNASEQ 0.99358 142738 0.976017 0.994217 0.827374 22006 1 76 0.00585468 123 0 5.71449e+07 0.0236486 524974 5.74773e+07 1.00034e+07 22022 2.84723e+07 0 0.148644 0.994217 0.822589 5.71449e+07 0.00273069 1.2312e+07 5.16757e+06 1.27523e+07 128 1.27492e+07 1.03905e+07 0.00429368 1.23528e+07 49.2104 0.00913358 0.994854 0 50.8783 GTEX-15RIE-0826-SM-6M47X 1 B1 5 pieces, squamous mucosa up to ~0.5mm, focal submucosal mucus glands delineated. Switched with 0725 8.4 Esophagus Esophagus - Mucosa 0006920 247 532 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994314 135671 0.977707 0.995742 0.837187 21601 1 76 0.00262189 138 0 6.55838e+07 0.0218869 396924 6.58642e+07 8.7998e+06 21612 3.26968e+07 0 0.14052 0.995742 0.833622 6.55838e+07 0.00354334 1.48193e+07 9.50586e+06 1.48905e+07 150 1.48891e+07 1.31297e+07 0.00308195 1.49094e+07 50.034 0.0060264 0.997169 0 50.1198 GTEX-15RIE-1026-SM-6LPJQ 1 B1 6 pieces, mucosa up to ~1mm 6.8 Stomach Stomach 0000945 262 517 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.985356 102369 0.982042 0.987333 0.844166 20924 1 76 0.00254484 257 0 5.96576e+07 0.0176486 555699 6.0423e+07 9.45689e+06 20936 2.97187e+07 0 0.137876 0.987333 0.833473 5.96576e+07 0.00342674 1.38594e+07 7.67261e+07 1.39306e+07 171 1.39087e+07 1.63157e+07 0.00298491 1.39898e+07 50.1454 0.00919682 0.989311 0 50.1281 GTEX-15RIE-1326-SM-6PAMM 1 B1 2 pieces, no abnormalities 7 Heart Heart - Atrial Appendage 0006631 275 504 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982993 202655 0.980893 0.989821 0.854962 22572 1 76 0.00304488 268 0 9.82766e+07 0.0188103 2.4853e+06 9.92873e+07 1.25057e+07 22593 4.87094e+07 0 0.125931 0.989821 0.846259 9.82766e+07 0.00521543 2.13955e+07 1.40933e+07 2.14483e+07 310 2.16181e+07 1.58592e+07 0.00412267 2.18187e+07 50.2309 0.0250314 0.996649 0 50.0616 GTEX-15RIE-1726-SM-7KUMU 1 B1 2 pieces, mild chronic ischemic change/interstitial fibrosis 8.7 Heart Heart - Left Ventricle 0006566 285 494 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678,LCSET-7011,LCSET-7084 04/23/2015 TruSeq.v1 RNASEQ 0.992557 337512 0.982266 0.993463 0.867534 20333 1 76 0.0035325 197 0 7.17975e+07 0.0174178 1.45666e+06 7.22699e+07 7.10204e+06 20342 3.57759e+07 0 0.114732 0.993463 0.861863 7.17975e+07 0.00207864 1.53589e+07 1.20065e+07 1.61471e+07 207 1.62035e+07 1.34431e+07 0.00280623 1.53641e+07 48.6704 0.0201559 0.994369 0 51.2508 GTEX-15RIE-1826-SM-6M48P 1 B1 6 pieces, mucosa up to ~0.4mm 7.6 Colon Colon - Transverse 0001157 290 489 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993279 126373 0.973901 0.99456 0.819944 23110 1 76 0.00255775 152 0 6.46521e+07 0.0248905 786755 6.50057e+07 9.03636e+06 23130 3.21995e+07 0 0.153957 0.99456 0.815484 6.46521e+07 0.00336839 1.43752e+07 7.41067e+06 1.43653e+07 153 1.43541e+07 1.13682e+07 0.00296254 1.44605e+07 50.1846 0.0121029 0.99584 0 49.9829 GTEX-15RIE-1926-SM-7KUKJ 0 B1 6 pieces, squamous epithelium is ~45microns; adherent dermal fat ~1-1.5mm, rep delineated 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 291 488 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991169 208316 0.977358 0.992829 0.866919 23603 1 76 0.00322537 284 0 8.81104e+07 0.022459 1.1004e+06 8.87467e+07 6.58335e+06 23613 4.38752e+07 0 0.110438 0.992829 0.860703 8.81104e+07 0.00401834 1.94168e+07 1.02194e+07 1.96626e+07 259 1.96466e+07 1.7098e+07 0.00362119 1.95738e+07 49.9073 0.0123993 0.99449 0 50.3146 GTEX-15RIE-2026-SM-7KFRW 1 B1 6 pieces, target muscularis; one section (delineated) is largely fat, autolyzed mucosa 7.6 Colon Colon - Sigmoid 0001159 295 484 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991647 251467 0.977811 0.993805 0.856514 23197 1 76 0.00264705 281 0 1.02215e+08 0.0218998 1.16113e+06 1.02852e+08 7.94974e+06 23218 5.08487e+07 0 0.121297 0.993805 0.851208 1.02215e+08 0.00284593 2.22973e+07 8.47148e+06 2.26329e+07 330 2.26394e+07 1.8993e+07 0.00274627 2.25002e+07 49.8458 0.0112893 0.995964 0 50.3735 GTEX-15RIE-2326-SM-7KFSC 0 B1 2 pieces, ~5-10% fascia/vascular elements, rep delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 384 395 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991602 159069 0.975074 0.993308 0.839796 23134 1 76 0.00280487 278 0 9.63214e+07 0.024625 840981 9.69703e+07 7.87065e+06 23164 4.7932e+07 0 0.135278 0.993308 0.834176 9.63214e+07 0.00280318 2.09732e+07 9.88933e+06 2.13582e+07 322 2.13493e+07 1.64084e+07 0.00280403 2.11485e+07 49.7637 0.00867256 0.995015 0 50.4548 GTEX-15RIE-2426-SM-7KUDS 0 B1 2 pieces, only trace interstitial fat; good specimens 8 Muscle Muscle - Skeletal 0011907 392 387 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987123 403570 0.983706 0.991663 0.887661 19483 1 76 0.00276087 278 0 9.19338e+07 0.0160324 2.04314e+06 9.27067e+07 7.97512e+06 19492 4.56477e+07 0 0.0960451 0.991663 0.88026 9.19338e+07 0.00300008 1.98777e+07 9.73133e+06 2.01258e+07 270 2.02945e+07 1.92263e+07 0.00287993 2.00872e+07 49.7433 0.0220387 0.996202 0 50.3101 GTEX-15RIE-5013-SM-AN43X B1 Heart Heart - Left Ventricle 0006566 401 ChIP-Seq GTEX-15RIE-5019-SM-AN43Y B1 Muscle Muscle - Skeletal 0011907 401 ChIP-Seq GTEX-15RIF-0004-SM-6RBL2 B1 Blood Whole Blood 0013756 -370 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15RIF-0004-SM-6UH2F B1 Blood Whole Blood 0013756 -370 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15RIF-0005-SM-7RHGH B1 9.1 Blood Whole Blood 0013756 -370 BP-49273 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991515 449852 0.964662 0.993441 0.830425 19088 1 76 0.00266836 203 0 9.1366e+07 0.03487 522932 9.19692e+07 8.77094e+06 19101 4.54941e+07 0 0.134237 0.993441 0.824978 9.1366e+07 0.00407598 2.01085e+07 4.50502e+07 2.02661e+07 225 2.0312e+07 1.85552e+07 0.0033708 2.02375e+07 49.9081 0.00568595 0.995367 0 50.1952 GTEX-15RIF-0008-SM-EAZ34 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 349 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993871 696831 0.971634 0.99467 0.83902 22017 1 76 0.00177169 287 0 1.14949e+08 0.0280281 484528 1.15565e+08 9.39859e+06 22040 5.73091e+07 0 0.132614 0.99467 0.834547 1.14949e+08 0.00241357 2.54727e+07 2.19273e+07 2.5754e+07 306 2.57432e+07 2.88106e+07 0.00209237 2.55811e+07 49.8421 0.0041927 0.995468 0 50.2746 GTEX-15RIF-0126-SM-7KUG3 1 B1 6 pieces, minimal atherosis, ~0.15mm 6.7 Blood Vessel Artery - Aorta 0001496 111 832 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989099 326173 0.975226 0.992675 0.851309 22170 1 76 0.00284707 278 0 9.65008e+07 0.0243749 601754 9.72129e+07 8.23454e+06 22188 4.7927e+07 0 0.123917 0.992675 0.845073 9.65008e+07 0.00349691 2.07743e+07 8.3028e+06 2.10078e+07 302 2.11191e+07 1.83882e+07 0.00317082 2.09861e+07 49.8421 0.00619006 0.99625 0 50.2794 GTEX-15RIF-0326-SM-7KUFR 1 B1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 119 824 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.98674 206026 0.977689 0.991037 0.885907 21722 1 76 0.00218548 227 0 8.48725e+07 0.0220012 695425 8.56401e+07 5.68648e+06 21733 4.21367e+07 0 0.0917821 0.991037 0.877967 8.48725e+07 0.00324772 1.86797e+07 1.04002e+07 1.88315e+07 244 1.88949e+07 1.86052e+07 0.0027143 1.89605e+07 50.0867 0.00812032 0.995335 0 50.2023 GTEX-15RIF-0526-SM-6LLI2 1 B1 2 pieces, no abnormalities 8 Spleen Spleen 0002106 125 818 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979983 215499 0.967734 0.987753 0.794018 24058 1 76 0.00258284 206 0 8.52305e+07 0.0319478 569184 8.62873e+07 7.71884e+06 24090 4.21806e+07 0 0.173717 0.987753 0.784293 8.52305e+07 0.00392099 1.8666e+07 1.00268e+07 1.87165e+07 220 1.8969e+07 1.44679e+07 0.00324665 1.90564e+07 50.115 0.00659639 0.995522 0 50.0675 GTEX-15RIF-0626-SM-6LLI3 1 B1 2 pieces, well preserved-- Islets well visualized, rep encircled, minimal fat 7.8 Pancreas Pancreas 0001150 127 816 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975186 227409 0.980943 0.985724 0.872283 20909 1 76 0.00264205 107 0 7.95439e+07 0.0187168 248341 8.06959e+07 7.14974e+06 20921 3.92606e+07 0 0.108659 0.985724 0.85983 7.95439e+07 0.0044565 1.81594e+07 2.13593e+07 1.83141e+07 120 1.86213e+07 2.49688e+07 0.00353957 1.87254e+07 50.1395 0.00307749 0.996261 0 50.2121 GTEX-15RIF-0826-SM-6M47C 1 B1 2 pieces, squamous mucosa up to ~0.3mm 7.2 Esophagus Esophagus - Mucosa 0006920 134 809 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993243 134759 0.982331 0.994851 0.87736 19396 1 76 0.00233313 126 0 5.62045e+07 0.0173686 547100 5.64954e+07 7.94775e+06 19403 2.80207e+07 0 0.10497 0.994851 0.872843 5.62045e+07 0.00354578 1.27039e+07 8.23699e+06 1.28087e+07 135 1.27761e+07 1.21718e+07 0.00293847 1.28287e+07 50.1026 0.00968397 0.99646 0 50.2054 GTEX-15RIF-0926-SM-7KUKP 1 B1 4 pieces, target mucsuclaris obtained 8.3 Esophagus Esophagus - Muscularis 0004648 136 807 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992776 310939 0.980246 0.994692 0.876022 22179 1 76 0.00312188 376 0 1.06995e+08 0.0194784 1.79824e+06 1.07566e+08 7.23902e+06 22191 5.32775e+07 0 0.104224 0.994692 0.871373 1.06995e+08 0.00432832 2.29906e+07 1.15352e+07 2.33745e+07 335 2.33125e+07 1.92127e+07 0.00372394 2.32344e+07 49.9162 0.0167176 0.996609 0 50.414 GTEX-15RIF-1026-SM-7KUMZ 1 B1 5 pieces, target muscularis obtained 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 141 802 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992048 272453 0.980243 0.993884 0.875982 22177 1 76 0.00328071 279 0 9.58102e+07 0.0194226 1.38133e+06 9.63998e+07 7.20585e+06 22195 4.771e+07 0 0.104261 0.993884 0.870625 9.58102e+07 0.00410471 2.06671e+07 9.26041e+06 2.0953e+07 292 2.09618e+07 1.80012e+07 0.00369195 2.08174e+07 49.8271 0.0143291 0.99572 0 50.3434 GTEX-15RIF-1126-SM-7KUG2 1 B1 6 pieces, mucosa well preserved, ~1mm, ~20-30% thickness 6.1 Stomach Stomach 0000945 146 797 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.979811 172223 0.974705 0.984516 0.88037 21267 1 76 0.00285871 177 0 7.5159e+07 0.0250047 1.01177e+06 7.63411e+07 7.29215e+06 21276 3.72701e+07 0 0.0943354 0.984516 0.866738 7.5159e+07 0.00366815 1.6148e+07 7.61643e+06 1.62967e+07 182 1.63391e+07 1.66939e+07 0.0032615 1.64141e+07 50.1146 0.0132533 0.989222 0 50.229 GTEX-15RIF-1326-SM-6LPKO 1 B1 6 pieces, mucosa ~0.3mm, ~5-10% thickness 8 Colon Colon - Transverse 0001157 156 787 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5860,LCSET-6156 09/18/2014 TruSeq.v1 RNASEQ 0.991141 246031 0.975284 0.993044 0.827059 23343 1 76 0.00229186 286 0 9.12765e+07 0.0243599 2.06106e+06 9.19159e+07 6.94996e+06 23366 4.54638e+07 0 0.148225 0.993044 0.821306 9.12765e+07 0.00298104 2.03497e+07 1.10771e+07 2.03407e+07 285 2.02774e+07 1.44198e+07 0.00263579 2.05718e+07 50.3603 0.0224234 0.994947 0 49.9889 GTEX-15RIF-1426-SM-7KUKQ 1 B1 6 pieces, all target muscularis 8.6 Colon Colon - Sigmoid 0001159 160 783 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991452 484866 0.97786 0.993458 0.85683 22433 1 76 0.00305862 285 0 9.99765e+07 0.0218306 1.08682e+06 1.00635e+08 6.58568e+06 22449 4.97621e+07 0 0.12103 0.993458 0.851225 9.99765e+07 0.00447216 2.15073e+07 1.0195e+07 2.1735e+07 293 2.18186e+07 1.84341e+07 0.00376396 2.16064e+07 49.7557 0.0107997 0.995465 0 50.2632 GTEX-15RIF-1526-SM-6M46K 1 B1 2 pieces, glandular hyperplasia. ~25% adherent fat, nerve elements, delineated 8.5 Prostate Prostate 0002367 161 782 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994945 160823 0.972429 0.996191 0.820145 23446 1 76 0.00241922 163 0 7.76564e+07 0.0271684 388558 7.79534e+07 1.0116e+07 23470 3.87168e+07 0 0.152284 0.996191 0.81702 7.76564e+07 0.0032181 1.7077e+07 7.14894e+06 1.71034e+07 193 1.70844e+07 1.36768e+07 0.00281816 1.71849e+07 50.1466 0.00498449 0.997436 0 50.0385 GTEX-15RIF-1826-SM-6M469 1 B1 2 pieces, spermatogenesis is present 7.8 Testis Testis 0000473 171 772 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992922 208627 0.934182 0.994281 0.736784 31658 1 76 0.00240842 147 0 7.17624e+07 0.0654813 771426 7.21752e+07 9.49311e+06 31717 3.57736e+07 0 0.197398 0.994281 0.732571 7.17624e+07 0.00318724 1.51396e+07 1.01472e+07 1.51012e+07 143 1.51355e+07 1.24014e+07 0.0027973 1.51926e+07 50.0941 0.0106882 0.99564 0 49.9364 GTEX-15RIF-1926-SM-7KUDW 0 B1 6 pieces, trace dermal fat, squamous epithelium is ~50 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 368 575 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.985332 269866 0.980641 0.990012 0.887163 23153 1 76 0.00286599 286 0 9.21034e+07 0.0191199 921736 9.30327e+07 7.7377e+06 23169 4.57001e+07 0 0.0934779 0.990012 0.878302 9.21034e+07 0.00359279 2.02204e+07 9.74334e+06 2.03998e+07 275 2.05322e+07 1.97718e+07 0.00322767 2.05032e+07 49.9646 0.00990766 0.994691 0 50.2208 GTEX-15RIF-2126-SM-7KUM8 0 B1 2 pieces, trace interstitial fat, rep delineated 8 Muscle Muscle - Skeletal 0011907 372 571 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992125 432288 0.984274 0.99401 0.893552 20965 1 76 0.00326171 291 0 1.23593e+08 0.0154115 1.8807e+06 1.24337e+08 9.09205e+06 20974 6.15443e+07 0 0.0907213 0.99401 0.8882 1.23593e+08 0.00385916 2.72681e+07 1.73116e+07 2.77525e+07 328 2.77796e+07 2.67005e+07 0.00355987 2.74424e+07 49.6947 0.0151257 0.995896 0 50.4402 GTEX-15RIG-0003-SM-6RBL9 B1 Blood Whole Blood 0013756 -57 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15RIG-0003-SM-6UH2M B1 Blood Whole Blood 0013756 -57 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15RIG-0006-SM-7PC1N B1 8.8 Blood Whole Blood 0013756 -57 BP-49273 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985815 922267 0.948025 0.989562 0.814153 19403 1 76 0.00391958 169 0 8.72006e+07 0.0514205 522967 8.81204e+07 1.45469e+07 19414 4.32898e+07 0 0.133872 0.989562 0.805655 8.72006e+07 0.00525859 1.87478e+07 5.10724e+07 1.90165e+07 175 1.91433e+07 1.75187e+07 0.00458655 1.89452e+07 49.7399 0.00593469 0.993309 0 50.3557 GTEX-15RIG-0008-SM-EAZCG B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 501 BP-49331 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993321 305064 0.981201 0.994246 0.862757 19736 1 76 0.00165679 158 0 7.47058e+07 0.0184902 243774 7.51382e+07 5.51026e+06 19749 3.72468e+07 0 0.118445 0.994246 0.857792 7.47058e+07 0.00265017 1.68098e+07 8.20124e+06 1.68918e+07 156 1.68953e+07 2.03073e+07 0.00215302 1.6874e+07 49.9684 0.00324434 0.995171 0 50.1216 GTEX-15RIG-0126-SM-6PAN4 1 B1 2 pieces, no abnormalities 7 Spleen Spleen 0002106 29 1317 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977426 285676 0.961697 0.98571 0.776954 25417 1 76 0.00367912 375 0 1.10864e+08 0.03733 1.27616e+06 1.12471e+08 1.29004e+07 25463 5.47655e+07 0 0.184743 0.98571 0.765851 1.10864e+08 0.00629291 2.41739e+07 1.54121e+07 2.41254e+07 331 2.44545e+07 1.58971e+07 0.00497503 2.4736e+07 50.2862 0.0113466 0.993994 0 49.9497 GTEX-15RIG-0226-SM-7KFTL 0 B1 6 pieces, minimal adherent dermal fat; squamous epithelium is ~50 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 500 846 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989387 219506 0.973033 0.991167 0.809811 23619 1 76 0.00280881 287 0 9.52403e+07 0.0267648 601111 9.6089e+07 7.24261e+06 23648 4.74001e+07 0 0.163222 0.991167 0.802657 9.52403e+07 0.00311583 2.07396e+07 1.0262e+07 2.10716e+07 305 2.10426e+07 1.56991e+07 0.00296204 2.09318e+07 49.868 0.00625577 0.992947 0 50.397 GTEX-15RIG-0426-SM-7KUF4 0 B1 2 pieces, minimal interstitial fat2 8.2 Muscle Muscle - Skeletal 0011907 505 841 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987507 412591 0.982722 0.99191 0.885101 19640 1 76 0.00268745 279 0 8.50431e+07 0.0170348 682000 8.57367e+07 7.16174e+06 19648 4.22335e+07 0 0.0976212 0.99191 0.877941 8.50431e+07 0.00323176 1.87646e+07 9.80336e+06 1.88838e+07 256 1.90468e+07 1.83053e+07 0.00295839 1.8941e+07 49.8607 0.00795459 0.996314 0 50.1584 GTEX-15RIG-0526-SM-7KFTP 0 B1 2 pieces, minimal adherent fat 6.1 Nerve Nerve - Tibial 0001323 506 840 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992225 240188 0.971026 0.993339 0.80033 24928 1 76 0.00261286 286 0 1.10711e+08 0.0286761 532865 1.11453e+08 7.4376e+06 24968 5.51266e+07 0 0.170696 0.993339 0.794999 1.10711e+08 0.00284534 2.42122e+07 1.04533e+07 2.45187e+07 318 2.44685e+07 1.99136e+07 0.00272897 2.43867e+07 49.9163 0.00478107 0.994452 0 50.3144 GTEX-15RIG-0726-SM-7KUM7 0 B1 6 pieces, no adherent dermal fat; squamous epithelium is ~50-60 microns 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 512 834 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990712 327379 0.971814 0.99253 0.82939 23953 1 76 0.00322644 380 0 1.03485e+08 0.0280078 1.17544e+06 1.04264e+08 7.33659e+06 23978 5.15058e+07 0 0.142425 0.99253 0.823194 1.03485e+08 0.00461869 2.26744e+07 1.461e+07 2.29788e+07 343 2.29127e+07 1.68114e+07 0.00392129 2.29218e+07 50.0099 0.0112738 0.994349 0 50.3334 GTEX-15RJ7-0001-SM-6RBLA B1 Blood Whole Blood 0013756 1289 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15RJ7-0001-SM-6UH2H B1 Blood Whole Blood 0013756 1289 BP-49271 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15RJ7-0006-SM-7RHHM B1 8.1 Blood Whole Blood 0013756 1289 BP-49273 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.980782 518184 0.971669 0.983329 0.826211 19351 1 76 0.00243196 163 0 1.01965e+08 0.027713 244820 1.03694e+08 9.94351e+06 19359 5.07298e+07 0 0.145458 0.983329 0.812437 1.01965e+08 0.00448039 2.32436e+07 9.50568e+07 2.33275e+07 191 2.3392e+07 2.5047e+07 0.00345352 2.34577e+07 50.0702 0.00236099 0.985875 0 50.09 GTEX-15RJ7-0008-SM-EAZCD B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 303 BP-49415 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993375 600896 0.982972 0.99429 0.879096 20689 1 76 0.00177492 293 0 1.06466e+08 0.016679 306333 1.07078e+08 7.42294e+06 20704 5.30641e+07 0 0.103876 0.99429 0.874077 1.06466e+08 0.00271986 2.40496e+07 1.10997e+07 2.41017e+07 278 2.41394e+07 2.93199e+07 0.00224695 2.41095e+07 49.969 0.00286085 0.995205 0 50.054 GTEX-15RJ7-0126-SM-6LPJN 0 B1 2 pieces; congestion 6.5 Spleen Spleen 0002106 173 495 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990177 199468 0.968973 0.992738 0.80056 22565 1 76 0.0033107 113 0 5.33843e+07 0.029994 342956 5.37748e+07 8.15563e+06 22581 2.65422e+07 0 0.168414 0.992738 0.794746 5.33843e+07 0.00444384 1.18593e+07 8.08926e+06 1.18597e+07 121 1.18713e+07 8.50341e+06 0.00387581 1.19772e+07 50.2219 0.00637764 0.995299 0 50.001 GTEX-15RJ7-0226-SM-7KUMN 0 B1 2 pieces; mild interstitial fibrosis with focal scarring (rep outlined), some hypertrophy 7.8 Heart Heart - Left Ventricle 0006566 177 491 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991963 283189 0.983959 0.993549 0.861727 21154 1 76 0.00357894 267 0 9.28834e+07 0.01574 2.27162e+06 9.34864e+07 5.66845e+06 21166 4.62727e+07 0 0.122232 0.993549 0.856168 9.28834e+07 0.00457265 2.00495e+07 2.28357e+07 2.01856e+07 262 2.01945e+07 1.55921e+07 0.004075 2.01609e+07 49.9583 0.024299 0.995136 0 50.1692 GTEX-15RJ7-0326-SM-6M47H 1 B1 2 pieces; one includes ~30% mildly autolyzed fat and connective tissue 7.3 Thyroid Thyroid 0002046 179 489 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994245 99216 0.969642 0.995659 0.776295 22885 1 76 0.00275594 108 0 5.35371e+07 0.0300865 232547 5.37705e+07 7.74254e+06 22913 2.66889e+07 0 0.193347 0.995659 0.772925 5.35371e+07 0.00356627 1.18032e+07 5.03075e+06 1.1816e+07 117 1.18107e+07 8.80046e+06 0.00316053 1.18786e+07 50.1432 0.00432481 0.997072 0 50.0272 GTEX-15RJ7-0526-SM-6PANP 0 B1 2 pieces; atheroma narrowing lumen up to 50-75%, adherent adipose and fibrovascular tissue with nerves up to 3.6mm 7.2 Blood Vessel Artery - Coronary 0001621 192 476 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976382 154555 0.973845 0.985661 0.829073 23319 1 76 0.00356801 157 0 7.43073e+07 0.0255138 415247 7.53883e+07 8.82926e+06 23344 3.66863e+07 0 0.144772 0.985661 0.817184 7.43073e+07 0.00641219 1.61386e+07 6.52531e+06 1.61174e+07 167 1.63974e+07 1.2864e+07 0.00497671 1.65235e+07 50.1914 0.00550811 0.994939 0 49.9672 GTEX-15RJ7-0626-SM-6M47V 0 B1 2 pieces; covered by pleura, some anthracotic-like pigment 8 Lung Lung 0008952 195 473 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993846 131972 0.977381 0.995459 0.838687 23017 1 76 0.00273102 140 0 6.75548e+07 0.0221454 271490 6.78629e+07 1.00325e+07 23035 3.36668e+07 0 0.138694 0.995459 0.834878 6.75548e+07 0.00363611 1.51019e+07 5.98325e+06 1.51725e+07 160 1.51743e+07 1.23619e+07 0.00318283 1.5203e+07 50.0472 0.00400057 0.997073 0 50.1166 GTEX-15RJ7-0826-SM-6LLI8 1 B1 2 pieces; ~10 to 50% external/internal fat, mildly autolyzed parenchyma with well visualized islets (rep outlined), fragment with focal PanIN-1 7.3 Pancreas Pancreas 0001150 200 468 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978474 176955 0.982828 0.987187 0.865692 21444 1 76 0.00275733 105 0 7.99233e+07 0.0167535 271371 8.09606e+07 7.09596e+06 21460 3.9524e+07 0 0.117136 0.987187 0.854599 7.99233e+07 0.00424646 1.82303e+07 2.18117e+07 1.83842e+07 124 1.85893e+07 2.4311e+07 0.00349533 1.87396e+07 50.2014 0.00335189 0.9959 0 50.2101 GTEX-15RJ7-0926-SM-6LPJO 0 B1 6 pieces; squamous mucosa up to 0.3mm, submucosal mucus glands noted (outlined) 8.8 Esophagus Esophagus - Mucosa 0006920 207 461 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991302 162609 0.979071 0.993396 0.85209 21720 1 76 0.00282707 125 0 5.98661e+07 0.0202104 239567 6.02641e+07 8.89951e+06 21733 2.98019e+07 0 0.126982 0.993396 0.846463 5.98661e+07 0.00382451 1.35707e+07 8.97616e+06 1.3532e+07 131 1.35589e+07 1.2734e+07 0.00332474 1.36631e+07 50.1914 0.00397529 0.99549 0 49.9286 GTEX-15RJ7-1726-SM-6PAL3 1 B1 6 pieces; target muscularis 7.3 Colon Colon - Sigmoid 0001159 243 425 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.973622 181663 0.979338 0.984526 0.893304 21687 1 76 0.00335287 203 0 9.45074e+07 0.0203507 891513 9.59928e+07 1.13018e+07 21701 4.66101e+07 0 0.0860341 0.984526 0.879481 9.45074e+07 0.00684847 2.02385e+07 1.09159e+07 2.02641e+07 206 2.06089e+07 2.23374e+07 0.00508132 2.08371e+07 50.2753 0.00928729 0.995429 0 50.0317 GTEX-15RJ7-1826-SM-7KUMJ 1 B1 2 pieces; spermatogenesis observed 7 Testis Testis 0000473 250 418 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990112 552680 0.942283 0.992298 0.744947 34105 1 76 0.00361976 279 0 1.15407e+08 0.0574406 1.71786e+06 1.16303e+08 7.8831e+06 34179 5.74279e+07 0 0.197336 0.992298 0.739209 1.15407e+08 0.00471189 2.44476e+07 1.7409e+07 2.46226e+07 295 2.47623e+07 1.73891e+07 0.00416463 2.45304e+07 49.7647 0.0147706 0.994483 0 50.1784 GTEX-15RJ7-2026-SM-6LPJ4 1 B1 2 pieces; mild steatosis 8.9 Liver Liver 0001114 258 410 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.986264 193723 0.979115 0.988206 0.866001 19944 1 76 0.00289207 120 0 6.44332e+07 0.0194489 548877 6.52022e+07 9.89228e+06 19959 3.20458e+07 0 0.113113 0.988206 0.855787 6.44332e+07 0.0036129 1.42481e+07 1.24327e+07 1.4124e+07 140 1.41418e+07 1.43131e+07 0.00325178 1.43455e+07 50.3574 0.00841807 0.990147 0 49.7812 GTEX-15RJ7-2126-SM-6PAMD 0 B1 6 pieces; minimal internal fat 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 266 402 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.97665 374526 0.975531 0.985696 0.843564 24795 1 76 0.00347824 303 0 1.11283e+08 0.0241105 399163 1.12898e+08 1.26521e+07 24823 5.50121e+07 0 0.131967 0.985696 0.831498 1.11283e+08 0.00649076 2.43167e+07 1.28335e+07 2.42494e+07 310 2.47365e+07 2.17207e+07 0.00497068 2.48249e+07 50.0892 0.0035356 0.994743 0 49.9307 GTEX-15RJ7-2426-SM-6M48L 0 B1 2 pieces; well trimmed 8 Muscle Muscle - Skeletal 0011907 280 388 BP-50487 RNA Extraction from Paxgene-derived Lysate Plate Based 03/13/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.995112 97766 0.984935 0.996557 0.89461 18224 1 76 0.00260931 119 0 6.00104e+07 0.0148364 609986 6.02177e+07 8.3331e+06 18230 2.99295e+07 0 0.0903253 0.996557 0.891529 6.00104e+07 0.0036479 1.31253e+07 6.3502e+06 1.31218e+07 139 1.30956e+07 1.22244e+07 0.00312785 1.32244e+07 50.2446 0.0101297 0.998001 0 49.9933 GTEX-15RJ7-5001-SM-AN43W B1 Heart Heart - Left Ventricle 0006566 190 ChIP-Seq GTEX-15RJ7-5016-SM-AN442 B1 Muscle Muscle - Skeletal 0011907 282 ChIP-Seq GTEX-15RJE-0003-SM-6RBL3 B1 Blood Whole Blood 0013756 1165 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15RJE-0003-SM-6UH2G B1 Blood Whole Blood 0013756 1165 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15RJE-0006-SM-7PC1J B1 7.5 Blood Whole Blood 0013756 1165 BP-49273 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.95144 407655 0.982027 0.95533 0.809092 17526 1 76 0.00311565 114 0 1.00807e+08 0.01567 347660 1.0552e+08 1.61874e+07 17532 4.99185e+07 0 0.172936 0.95533 0.772949 1.00807e+08 0.00582798 2.37981e+07 1.78005e+08 2.36022e+07 147 2.37378e+07 2.73986e+07 0.0044663 2.40801e+07 50.3579 0.00329472 0.95922 0 49.7934 GTEX-15RJE-0008-SM-EAZ31 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1220 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.994022 889159 0.980269 0.994825 0.852724 21996 1 76 0.00167658 388 0 1.18958e+08 0.0193825 488573 1.19577e+08 9.31856e+06 22021 5.92931e+07 0 0.127545 0.994825 0.84831 1.18958e+08 0.00232535 2.66589e+07 1.2983e+07 2.68315e+07 332 2.68476e+07 3.02202e+07 0.00200071 2.67407e+07 49.9002 0.00408585 0.995628 0 50.1614 GTEX-15RJE-0011-R2b-SM-79OMP B1, A1 6.7 Brain Brain - Substantia nigra 0002038 1150 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994121 657593 0.956284 0.994087 0.822271 24915 1 76 0.00307326 377 0 1.09875e+08 0.0434714 6.37391e+06 1.10529e+08 6.25008e+06 24941 5.47432e+07 0 0.134013 0.994087 0.817408 1.09875e+08 0.00425672 2.39707e+07 2.30575e+07 2.44503e+07 345 2.41976e+07 1.17104e+07 0.00366501 2.42167e+07 50.0197 0.0576674 0.994052 0 50.4952 GTEX-15RJE-0011-R6a-SM-7DHL8 B1, A1 8.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1150 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991577 553915 0.952315 0.992797 0.816782 24347 1 76 0.00362041 268 0 8.03281e+07 0.0472843 3.10956e+06 8.09109e+07 6.03094e+06 24367 3.9994e+07 0 0.135533 0.992797 0.810899 8.03281e+07 0.00523194 1.73821e+07 1.92424e+07 1.76029e+07 257 1.75761e+07 9.83985e+06 0.00442518 1.74988e+07 49.8898 0.038432 0.994018 0 50.3155 GTEX-15RJE-0011-R7a-SM-7DHL9 B1, A1 8.4 Brain Brain - Putamen (basal ganglia) 0001874 1150 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99084 568386 0.95226 0.992306 0.811442 24012 1 76 0.00365373 199 0 7.79797e+07 0.0474113 2.22174e+06 7.85844e+07 6.03085e+06 24030 3.88274e+07 0 0.140818 0.992306 0.805199 7.79797e+07 0.00536944 1.68818e+07 1.81518e+07 1.70793e+07 240 1.70962e+07 9.57334e+06 0.00451032 1.69747e+07 49.8216 0.0282721 0.993772 0 50.2908 GTEX-15RJE-0526-SM-6PAMN 1 B1 2 pieces; heavily calcified but patent arteries; 30% external fatty & neural content 6.3 Blood Vessel Artery - Tibial 0007610 1235 665 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.97757 271080 0.973541 0.985961 0.819147 23153 1 76 0.00320795 286 0 1.04077e+08 0.0259976 490826 1.05559e+08 1.18009e+07 23182 5.14415e+07 0 0.154394 0.985961 0.807647 1.04077e+08 0.00584664 2.23394e+07 8.55123e+06 2.22647e+07 267 2.2616e+07 1.96814e+07 0.00451606 2.2816e+07 50.2202 0.00464978 0.994352 0 49.9163 GTEX-15RJE-0626-SM-7KUKR 1 B1 2 pieces 6.5 Heart Heart - Left Ventricle 0006566 1301 599 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989704 258489 0.981312 0.991572 0.805613 22707 1 76 0.0034139 371 0 1.19744e+08 0.0185901 6.34923e+06 1.20762e+08 8.38328e+06 22731 5.96383e+07 0 0.1757 0.991572 0.798822 1.19744e+08 0.00456394 2.5962e+07 4.64499e+07 2.63783e+07 362 2.63569e+07 9.47029e+06 0.00398784 2.61257e+07 49.7797 0.0525763 0.993439 0 50.3977 GTEX-15RJE-0726-SM-7KUEG 1 B1 2 pieces; 1 contains 20% blood clot; other is all blood clot [labeled] 6.8 Heart Heart - Atrial Appendage 0006631 1304 596 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989144 235754 0.975175 0.992496 0.78616 23062 1 76 0.0032277 154 0 7.24698e+07 0.0245566 1.30374e+06 7.30177e+07 6.34558e+06 23088 3.6017e+07 0 0.189015 0.992496 0.780261 7.24698e+07 0.00321444 1.57049e+07 8.61778e+06 1.58483e+07 176 1.59309e+07 1.05325e+07 0.00322109 1.58352e+07 49.8494 0.0178552 0.995848 0 50.2272 GTEX-15RJE-0926-SM-6LLHZ 0 B1 6 pieces 8.3 Esophagus Esophagus - Mucosa 0006920 1335 565 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979974 224834 0.972976 0.987729 0.802969 23142 1 76 0.00250053 276 0 1.03179e+08 0.0267543 578357 1.04461e+08 8.87356e+06 23164 5.10793e+07 0 0.170007 0.987729 0.793116 1.03179e+08 0.00383929 2.3023e+07 1.28666e+07 2.30924e+07 290 2.34096e+07 1.8327e+07 0.00316465 2.35018e+07 50.0983 0.00553657 0.995485 0 50.0753 GTEX-15RJE-1026-SM-6M46X 1 B1 2 pieces 6.8 Lung Lung 0008952 1336 564 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992374 116130 0.968683 0.993905 0.749552 23373 1 76 0.00266001 127 0 5.90386e+07 0.0310157 241103 5.94006e+07 7.54597e+06 23402 2.94007e+07 0 0.219131 0.993905 0.744984 5.90386e+07 0.00370705 1.29946e+07 5.33651e+06 1.3003e+07 133 1.29981e+07 9.02908e+06 0.00318273 1.30872e+07 50.1707 0.00405893 0.995436 0 50.0162 GTEX-15RJE-1126-SM-6LPI5 1 B1 2 pieces; several focal hemorrhages [outlined]; capsule sampled 6.2 Liver Liver 0001114 1337 563 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992282 127688 0.976481 0.994417 0.829569 19897 1 76 0.00264055 122 0 6.23721e+07 0.0225204 1.27468e+06 6.27223e+07 9.10761e+06 19907 3.10446e+07 0 0.146912 0.994417 0.824937 6.23721e+07 0.00357109 1.37372e+07 1.13281e+07 1.35648e+07 161 1.35757e+07 8.36541e+06 0.00310482 1.38491e+07 50.4984 0.0203226 0.996553 0 49.6844 GTEX-15RJE-1326-SM-6LPI6 1 B1 2 pieces; foci of fibrosis and cysts 6.5 Thyroid Thyroid 0002046 1341 559 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991785 149116 0.961975 0.993897 0.73245 24067 1 76 0.00270364 133 0 7.16804e+07 0.0377632 500406 7.21205e+07 1.14934e+07 24102 3.56898e+07 0 0.229525 0.993897 0.72798 7.16804e+07 0.00352845 1.56763e+07 9.19181e+06 1.56766e+07 155 1.56759e+07 9.98171e+06 0.00311517 1.58177e+07 50.2251 0.00693847 0.996009 0 50.0004 GTEX-15RJE-2226-SM-6M46A 1 B1 6 pieces; fatty submucosa occupies 30% in 3 of 6 pieces 6.1 Colon Colon - Sigmoid 0001159 1363 537 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992017 80944 0.970065 0.99367 0.798206 22202 1 76 0.00250259 135 0 5.40699e+07 0.0296806 842760 5.44143e+07 7.28293e+06 22220 2.69273e+07 0 0.171859 0.99367 0.793153 5.40699e+07 0.00366204 1.17809e+07 5.82497e+06 1.17832e+07 138 1.1751e+07 8.36985e+06 0.00308135 1.1902e+07 50.3193 0.0154878 0.995323 0 50.0049 GTEX-15RJE-2326-SM-6LPIZ 1 B1 2 pieces; complete tubular sclerosis, absent spermatogenesis; Leydig cell hyperplasia; possible Klinefelter syndrome 5.9 Testis Testis 0000473 1365 535 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.991468 154173 0.964708 0.99356 0.691341 23549 1 76 0.0028157 122 0 6.38481e+07 0.0350433 267824 6.42619e+07 1.03227e+07 23596 3.17805e+07 0 0.273367 0.99356 0.686889 6.38481e+07 0.00358515 1.40829e+07 7.55001e+06 1.40285e+07 129 1.4044e+07 8.85613e+06 0.00319961 1.41936e+07 50.265 0.00416769 0.995651 0 49.9033 GTEX-15RJE-2426-SM-6PAM9 1 B1 6 pieces; 2 pieces have excessive adventitia with artery and fibrofatty stroma; minimal plaque 7.5 Blood Vessel Artery - Aorta 0001496 1366 534 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976623 221318 0.973808 0.985457 0.823172 22891 1 76 0.00328577 219 0 9.91262e+07 0.0257422 415985 1.00589e+08 1.21322e+07 22909 4.89533e+07 0 0.150636 0.985457 0.811201 9.91262e+07 0.00617987 2.1119e+07 1.12448e+07 2.11034e+07 222 2.14335e+07 2.00052e+07 0.00471985 2.16134e+07 50.2089 0.00413549 0.994291 0 49.9815 GTEX-15RJE-2626-SM-7KFT1 1 B1 2 pieces; no increase in fibrous stroma; no tubules 5.7 Breast Breast - Mammary Tissue 0008367 1373 527 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989358 150363 0.977811 0.991903 0.842819 22404 1 76 0.0029358 375 0 9.5496e+07 0.021861 1.58104e+06 9.62755e+07 7.73508e+06 22426 4.7478e+07 0 0.134992 0.991903 0.835995 9.5496e+07 0.00279276 2.08945e+07 1.02874e+07 2.13984e+07 332 2.14169e+07 1.483e+07 0.00286447 2.11056e+07 49.634 0.016422 0.994448 0 50.5957 GTEX-15RJE-2726-SM-6LPJ1 1 B1 1 piece; well dissected gland with only small fibrous content 8.1 Salivary Gland Minor Salivary Gland 0006330 1376 524 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.988449 149392 0.976374 0.990769 0.836898 22342 1 76 0.00307212 184 0 6.1494e+07 0.0219196 274302 6.2067e+07 9.64763e+06 22363 3.05589e+07 0 0.139476 0.990769 0.829173 6.1494e+07 0.00428349 1.40908e+07 1.65314e+07 1.40067e+07 158 1.40237e+07 1.08593e+07 0.00367638 1.42117e+07 50.333 0.00441945 0.993089 0 49.8503 GTEX-15RJE-2826-SM-7KUM9 1 B1 6 pieces; 10% dermal fat 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1380 520 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992269 229966 0.974685 0.993732 0.813102 23094 1 76 0.00340881 218 0 8.22875e+07 0.0250781 690813 8.28065e+07 5.82123e+06 23127 4.09838e+07 0 0.161583 0.993732 0.808006 8.22875e+07 0.00412574 1.80644e+07 1.00782e+07 1.82189e+07 218 1.8229e+07 1.37955e+07 0.00376675 1.81666e+07 49.9142 0.0083425 0.995194 0 50.2129 GTEX-15RJE-3026-SM-7KUM1 2 B1 2 pieces 6.4 Brain Brain - Cortex 0001870 1415 485 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990674 431005 0.970639 0.993031 0.840357 24226 1 76 0.00328173 370 0 9.53129e+07 0.0290344 5.45014e+06 9.59818e+07 6.60551e+06 24242 4.74185e+07 0 0.130282 0.993031 0.8345 9.53129e+07 0.00484468 2.07596e+07 2.2547e+07 2.11353e+07 347 2.10422e+07 1.10958e+07 0.00406135 2.10327e+07 49.9887 0.0567831 0.995388 0 50.4484 GTEX-15SB6-0002-SM-6RBJK B1 Blood Whole Blood 0013756 -47 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SB6-0002-SM-6UH1J B1 Blood Whole Blood 0013756 -47 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SB6-0005-SM-7P8OO B1 9.4 Blood Whole Blood 0013756 -48 BP-49507 RNA isolation_PAXgene Blood RNA (Manual) 02/14/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.979371 1.12343e+06 0.956103 0.981443 0.791847 19631 1 76 0.00318831 270 0 1.18017e+08 0.0429809 268018 1.20248e+08 1.76943e+07 19643 5.87167e+07 0 0.164256 0.981443 0.777152 1.18017e+08 0.00416743 2.62929e+07 1.3203e+08 2.6553e+07 260 2.66585e+07 2.76576e+07 0.00367684 2.64434e+07 49.7974 0.00222887 0.983515 0 50.2461 GTEX-15SB6-0008-SM-EAZCE B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 714 BP-49418 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992623 435300 0.981992 0.993548 0.868026 20196 1 76 0.00169647 231 0 9.70346e+07 0.0176772 202725 9.76647e+07 7.34131e+06 20215 4.83731e+07 0 0.113966 0.993548 0.862426 9.70346e+07 0.00260363 2.19181e+07 1.03306e+07 2.20131e+07 235 2.20258e+07 2.64067e+07 0.00214963 2.19946e+07 49.9646 0.00207572 0.994473 0 50.1081 GTEX-15SB6-0126-SM-6LPJR 0 B1 2 pieces; congested, 1 piece includes capsule (target is 5mm below capsule) 7 Spleen Spleen 0002106 86 1205 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.989839 105521 0.967847 0.991995 0.771573 22733 1 76 0.00381109 106 0 5.68407e+07 0.0291114 299170 5.72994e+07 8.71879e+06 22756 2.82192e+07 0 0.196274 0.991995 0.765396 5.68407e+07 0.00468802 1.26983e+07 1.11305e+07 1.26736e+07 118 1.27085e+07 9.29893e+06 0.0042486 1.27804e+07 50.141 0.00522117 0.994152 0 49.9513 GTEX-15SB6-0226-SM-6LLIA 1 B1 2 pieces; small portion of attached fat on 1 piece, focal PanIN-1, some atrophy 6.5 Pancreas Pancreas 0001150 481 810 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.956141 5.99183e+06 0.775001 0.963299 0.620723 20720 1 76 0.00257707 91 0 9.37196e+07 0.223757 905930 9.72902e+07 9.02861e+06 20736 4.63911e+07 0 0.154278 0.963299 0.597942 9.37196e+07 0.00418707 1.67356e+07 2.61748e+08 1.72072e+07 104 1.73754e+07 2.06104e+07 0.00337609 1.72499e+07 49.8187 0.00931163 0.970457 0 50.6947 GTEX-15SB6-0426-SM-6LPJ5 1 B1 2 pieces; extensive hemorrhage/clot 6.6 Lung Lung 0008952 487 804 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990475 142575 0.971656 0.992854 0.798275 23715 1 76 0.00284411 128 0 6.13542e+07 0.0279622 406499 6.17958e+07 9.72095e+06 23734 3.05367e+07 0 0.17338 0.992854 0.79257 6.13542e+07 0.00391876 1.35996e+07 7.54741e+06 1.35924e+07 142 1.35717e+07 1.03219e+07 0.00338015 1.37589e+07 50.3425 0.0065781 0.995232 0 49.9867 GTEX-15SB6-0726-SM-6M48F 1 B1 6 pieces; includes small portion of muscularis propria 9.1 Esophagus Esophagus - Mucosa 0006920 523 768 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994239 124570 0.980003 0.995385 0.852336 21811 1 76 0.00245923 172 0 7.88758e+07 0.0193938 246339 7.92415e+07 1.02268e+07 21823 3.93266e+07 0 0.127667 0.995385 0.848403 7.88758e+07 0.00319566 1.78314e+07 1.06084e+07 1.78915e+07 182 1.78721e+07 1.75765e+07 0.00282702 1.79395e+07 50.0941 0.00310871 0.996531 0 50.0841 GTEX-15SB6-0826-SM-7KUMK 1 B1 6 pieces; well trimmed 8 Esophagus Esophagus - Muscularis 0004648 524 767 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992093 301905 0.975307 0.994068 0.8481 22996 1 76 0.00307826 275 0 9.9954e+07 0.0243986 564576 1.0055e+08 6.7515e+06 23020 4.9758e+07 0 0.127208 0.994068 0.843069 9.9954e+07 0.00442853 2.14073e+07 9.09184e+06 2.15537e+07 299 2.15853e+07 1.90253e+07 0.00375205 2.15559e+07 49.9659 0.00561485 0.996043 0 50.1705 GTEX-15SB6-0926-SM-7KUFM 1 B1 6 pieces; well trimmed 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 528 763 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.982057 590322 0.977788 0.988493 0.873536 22930 1 76 0.00278662 285 0 1.27374e+08 0.0218728 531241 1.28857e+08 1.09305e+07 22947 6.30979e+07 0 0.104252 0.988493 0.863484 1.27374e+08 0.00383403 2.69366e+07 1.08716e+07 2.73093e+07 321 2.76131e+07 2.72914e+07 0.00330692 2.73849e+07 49.7925 0.00412273 0.994928 0 50.3435 GTEX-15SB6-1226-SM-7KUMP 2 B1 6 pieces; full thickness sections, moderate autolysis, some attached fat 5.7 Colon Colon - Transverse 0001157 546 745 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.987593 319234 0.972648 0.989636 0.831686 24389 1 76 0.00433443 209 0 8.84485e+07 0.0232383 724760 8.93747e+07 6.32612e+06 24410 4.3825e+07 0 0.140962 0.989636 0.823067 8.84485e+07 0.00560184 1.95893e+07 1.34681e+07 1.97235e+07 224 1.98204e+07 1.52793e+07 0.00496683 1.96557e+07 49.7913 0.00810923 0.99168 0 50.1707 GTEX-15SB6-1426-SM-7KUEM 0 B1 6 pieces 8.1 Vagina Vagina 0000996 566 725 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984116 441352 0.975805 0.989594 0.775839 24400 1 76 0.00330966 177 0 9.00217e+07 0.0238646 199877 9.09683e+07 8.1842e+06 24440 4.46135e+07 0 0.199967 0.989594 0.767766 9.00217e+07 0.00366957 2.00338e+07 1.08402e+07 2.02244e+07 199 2.05109e+07 1.69468e+07 0.00348862 2.0232e+07 49.6578 0.00219722 0.995073 0 50.2367 GTEX-15SB6-1526-SM-7KUMQ 1 B1 2 pieces 6.5 Thyroid Thyroid 0002046 574 717 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991979 402831 0.969923 0.993778 0.802366 24792 1 76 0.00342028 209 0 9.51166e+07 0.0297321 304105 9.57122e+07 7.00092e+06 24825 4.73512e+07 0 0.167557 0.993778 0.797373 9.51166e+07 0.00429347 2.07716e+07 1.04087e+07 2.09667e+07 239 2.10345e+07 1.76401e+07 0.00385609 2.08678e+07 49.8011 0.00317729 0.995576 0 50.2337 GTEX-15SB6-1726-SM-6PAME 1 B1 6 pieces; up to 10% attached and internal fat, epidermis measures 35 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 717 574 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.97836 217423 0.978357 0.986898 0.875778 23846 1 76 0.0032249 297 0 1.07725e+08 0.0212407 683631 1.09156e+08 1.30277e+07 23866 5.32504e+07 0 0.102578 0.986898 0.864304 1.07725e+08 0.00610371 2.34435e+07 1.41139e+07 2.34283e+07 286 2.37721e+07 2.36325e+07 0.00465185 2.40144e+07 50.2535 0.00626291 0.995436 0 49.9838 GTEX-15SB6-1826-SM-6PALN 0 B1 2 pieces; includes minimal portion of fat 8.6 Muscle Muscle - Skeletal 0011907 713 578 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.985197 164482 0.983713 0.990904 0.874292 20096 1 76 0.0029907 277 0 9.60364e+07 0.0160411 835832 9.69179e+07 1.1138e+07 20108 4.76669e+07 0 0.109421 0.990904 0.866339 9.60364e+07 0.00493128 2.06106e+07 1.08027e+07 2.05494e+07 271 2.08286e+07 2.05595e+07 0.0039554 2.08462e+07 50.0212 0.00862412 0.996611 0 49.9257 GTEX-15SB6-5001-SM-AN44H B1 Lung Lung 0008952 487 ChIP-Seq GTEX-15SB6-5016-SM-AN44J B1 Muscle Muscle - Skeletal 0011907 718 ChIP-Seq GTEX-15SDE-0001-SM-6RBLS B1 Blood Whole Blood 0013756 -57 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SDE-0001-SM-6UH2N B1 Blood Whole Blood 0013756 -57 BP-49510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SDE-0006-SM-7PC19 B1 9.2 Blood Whole Blood 0013756 -57 BP-49507 RNA isolation_PAXgene Blood RNA (Manual) 02/14/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985507 717810 0.960045 0.988717 0.823482 22246 1 76 0.00402175 286 0 1.28183e+08 0.0382098 693833 1.29646e+08 1.66007e+07 22266 6.36188e+07 0 0.136563 0.988717 0.814191 1.28183e+08 0.00595134 2.79498e+07 6.21123e+07 2.80788e+07 330 2.82288e+07 2.62706e+07 0.00498341 2.81895e+07 49.9651 0.00535176 0.991928 0 50.1152 GTEX-15SDE-0008-SM-EAZCF B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 337 BP-49470 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992029 474843 0.976555 0.992999 0.860353 20422 1 76 0.00190193 183 0 8.79613e+07 0.0231001 385379 8.85814e+07 7.06678e+06 20438 4.38373e+07 0 0.116203 0.992999 0.854329 8.79613e+07 0.00276196 1.96271e+07 1.43829e+07 1.97638e+07 182 1.97437e+07 2.34361e+07 0.00233153 1.97364e+07 49.9907 0.00435056 0.993968 0 50.1735 GTEX-15SDE-0126-SM-793BA 2 B1 2 pieces; severe congestion 7.8 Spleen Spleen 0002106 252 484 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.991009 350131 0.965718 0.992245 0.75409 24347 1 76 0.00397396 140 0 7.74167e+07 0.0318799 286290 7.80218e+07 1.10379e+07 24379 3.84652e+07 0 0.211628 0.992245 0.748242 7.74167e+07 0.00458771 1.71685e+07 1.15683e+07 1.7122e+07 158 1.72185e+07 1.19397e+07 0.00428045 1.71625e+07 49.9186 0.00366936 0.993481 0 49.9322 GTEX-15SDE-0726-SM-6M48Q 1 B1 6 pieces; well dissected 8.4 Esophagus Esophagus - Muscularis 0004648 261 475 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994672 133666 0.975477 0.995816 0.82854 22311 1 76 0.00253819 179 0 7.89784e+07 0.0241954 514516 7.93102e+07 1.01795e+07 22328 3.93711e+07 0 0.146937 0.995816 0.825073 7.89784e+07 0.00326133 1.71634e+07 6.29971e+06 1.72286e+07 198 1.71958e+07 1.44733e+07 0.00289935 1.72821e+07 50.1252 0.00648738 0.996959 0 50.0948 GTEX-15SDE-0826-SM-6M463 1 B1 2 pieces; 1 piece has 30% external fat 7.5 Pancreas Pancreas 0001150 262 474 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994078 148985 0.973504 0.99567 0.808461 21644 1 76 0.00272574 107 0 5.73894e+07 0.0263287 158890 5.7639e+07 7.632e+06 21662 2.86031e+07 0 0.165043 0.99567 0.80496 5.73894e+07 0.00394601 1.30383e+07 1.29877e+07 1.30736e+07 113 1.30812e+07 1.49261e+07 0.0033349 1.31247e+07 50.0829 0.00275664 0.997261 0 50.0675 GTEX-15SDE-0926-SM-6LPIA 1 B1 2 pieces; 1 mm epithelial cyst 7.9 Ovary Ovary 0000992 263 473 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992227 156631 0.965581 0.994244 0.742241 23373 1 76 0.00291911 137 0 6.76509e+07 0.0340504 159006 6.80425e+07 1.0467e+07 23416 3.36848e+07 0 0.22334 0.994244 0.737969 6.76509e+07 0.00363411 1.489e+07 7.7319e+06 1.48347e+07 139 1.48509e+07 1.14536e+07 0.00327588 1.50006e+07 50.2507 0.00233686 0.996261 0 49.9069 GTEX-15SDE-1726-SM-6LPJS 1 B1 6 pieces 7.6 Vagina Vagina 0000996 276 460 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990971 149452 0.970933 0.993083 0.735035 22801 1 76 0.00302916 122 0 6.08454e+07 0.0288075 156819 6.12692e+07 9.46373e+06 22828 3.02961e+07 0 0.235898 0.993083 0.729951 6.08454e+07 0.00388008 1.36552e+07 8.44524e+06 1.36086e+07 123 1.36253e+07 1.00561e+07 0.00345372 1.37608e+07 50.2473 0.00255951 0.995195 0 49.9145 GTEX-15SDE-1826-SM-7KUFN 1 B1 2 pieces: 1 has 20% internal fat, other has 10% 6.1 Heart Heart - Atrial Appendage 0006631 277 459 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.98601 360389 0.980251 0.991273 0.85307 22648 1 76 0.00356879 200 0 8.73287e+07 0.0193888 1.2402e+06 8.80975e+07 7.64625e+06 22667 4.33178e+07 0 0.127181 0.991273 0.845626 8.73287e+07 0.00387322 1.85365e+07 9.5847e+06 1.86735e+07 245 1.88228e+07 1.59117e+07 0.0037202 1.87842e+07 49.9488 0.0140776 0.996537 0 50.184 GTEX-15SDE-2226-SM-7IGLO 1 B1 6 pieces; well trimmed; 5% dermal fat 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 339 397 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993031 525505 0.966789 0.993945 0.758033 25976 1 76 0.00239099 387 0 1.10735e+08 0.0329659 410927 1.11409e+08 6.89105e+06 26019 5.51531e+07 0 0.208756 0.993945 0.753443 1.10735e+08 0.00332182 2.41284e+07 1.15686e+07 2.43185e+07 332 2.42849e+07 1.65374e+07 0.00285598 2.4261e+07 49.9754 0.00368844 0.994858 0 50.1962 GTEX-15SDE-2326-SM-6PAL4 1 B1 2 pieces; minimal internal fat 8.3 Muscle Muscle - Skeletal 0011907 342 394 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982081 235709 0.983055 0.988565 0.868582 21626 1 76 0.00350076 386 0 1.31614e+08 0.0166879 1.63559e+06 1.33137e+08 1.49033e+07 21643 6.52651e+07 0 0.114473 0.988565 0.85865 1.31614e+08 0.00557144 2.87288e+07 1.66949e+07 2.86052e+07 337 2.89007e+07 2.45738e+07 0.00452931 2.92407e+07 50.2924 0.0122851 0.995049 0 49.8922 GTEX-15SDE-2426-SM-72D6L 1 B1 2 pieces: both contain small foci of nerves at edge (labeled); central holes 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 346 390 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.988442 128983 0.973381 0.989483 0.784034 22857 1 76 0.0031576 149 0 7.17167e+07 0.0262914 429206 7.24789e+07 4.44658e+06 22885 3.56495e+07 0 0.189347 0.989483 0.775789 7.17167e+07 0.004064 1.58121e+07 6.31323e+06 1.5792e+07 160 1.58534e+07 1.15201e+07 0.00361032 1.582e+07 49.9473 0.0059218 0.990524 0 49.9682 GTEX-15SDE-2426-SM-7KFRC 1 B1 2 pieces: both contain small foci of nerves at edge (labeled); central holes 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 346 390 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990358 325183 0.975547 0.992382 0.809293 24069 1 76 0.00332036 280 0 1.005e+08 0.0240994 688524 1.01272e+08 7.99673e+06 24104 4.99894e+07 0 0.166255 0.992382 0.803128 1.005e+08 0.00328578 2.19126e+07 9.83117e+06 2.22583e+07 295 2.22904e+07 1.69429e+07 0.00330311 2.20707e+07 49.7523 0.00679877 0.994408 0 50.3914 GTEX-15SDE-2526-SM-6PAL5 1 B1 2 pieces; well trimmed; no lesions 7.6 Blood Vessel Artery - Tibial 0007610 347 389 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.975167 205198 0.977999 0.985167 0.852521 23141 1 76 0.0033509 283 0 1.19111e+08 0.0215739 556832 1.20905e+08 1.44661e+07 23161 5.87784e+07 0 0.125478 0.985167 0.839876 1.19111e+08 0.00649305 2.54944e+07 1.00589e+07 2.54174e+07 329 2.58716e+07 2.55897e+07 0.00490603 2.61549e+07 50.2722 0.00460554 0.995168 0 49.9244 GTEX-15SDE-5013-SM-AN443 B1 Heart Heart - Left Ventricle 0006566 346 ChIP-Seq GTEX-15SDE-5019-SM-AN445 B1 Muscle Muscle - Skeletal 0011907 346 ChIP-Seq GTEX-15SHU-0001-SM-6RBL6 C1 Blood Whole Blood 0013756 1005 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SHU-0001-SM-6UH2J C1 Blood Whole Blood 0013756 1005 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SHU-0008-SM-EAZ35 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1080 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.992839 1.01245e+06 0.940552 0.993794 0.798102 22115 1 76 0.00166889 288 0 1.10975e+08 0.0590682 284745 1.11668e+08 8.3514e+06 22134 5.53096e+07 0 0.14245 0.993794 0.793149 1.10975e+08 0.00227953 2.37999e+07 5.80905e+07 2.44109e+07 280 2.44451e+07 2.65152e+07 0.00197392 2.3872e+07 49.4069 0.00254992 0.99475 0 50.6337 GTEX-15SHU-0011-R10a-SM-AHZNA C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1020 ChIP-Seq GTEX-15SHU-0011-R3a-SM-7IGPS C1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1020 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995801 571979 0.957561 0.996159 0.842003 22568 1 76 0.00173607 198 0 6.92258e+07 0.0421072 3.96558e+06 6.94927e+07 2.45203e+06 22583 3.45096e+07 0 0.115558 0.996159 0.838769 6.92258e+07 0.00219119 1.49578e+07 1.81734e+07 1.5293e+07 237 1.51493e+07 7.67255e+06 0.00196355 1.5127e+07 49.9632 0.0570647 0.996516 0 50.554 GTEX-15SHU-0011-R4b-SM-7IGLC C1, A1 6.2 Brain Brain - Amygdala 0001876 1020 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995027 855810 0.952081 0.996025 0.837422 23147 1 76 0.00189821 269 0 8.38663e+07 0.0476481 5.06897e+06 8.4201e+07 5.47459e+06 23161 4.18147e+07 0 0.114659 0.996025 0.834093 8.38663e+07 0.00250112 1.80118e+07 2.68475e+07 1.85174e+07 324 1.83592e+07 9.13575e+06 0.00219936 1.82495e+07 49.8502 0.0602009 0.997023 0 50.692 GTEX-15SHU-0011-R5a-SM-7938Q C1, A1 9 Brain Brain - Caudate (basal ganglia) 0001873 1020 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994424 438177 0.95195 0.995113 0.779248 23871 1 76 0.00185167 105 0 5.32955e+07 0.0476169 1.61808e+06 5.35573e+07 2.29787e+06 23899 2.65571e+07 0 0.172702 0.995113 0.77544 5.32955e+07 0.00219982 1.1548e+07 1.10368e+07 1.16089e+07 134 1.16381e+07 6.97044e+06 0.00202562 1.15491e+07 49.808 0.0302121 0.995801 0 50.1314 GTEX-15SHU-0126-SM-7KUEH 0 C1 6 pieces; well trimmed; <5% dermal fat 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1079 1239 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989538 272278 0.973704 0.992591 0.830184 22691 1 76 0.00313956 189 0 6.74435e+07 0.0260185 421414 6.7947e+07 6.09642e+06 22708 3.35188e+07 0 0.14352 0.992591 0.824033 6.74435e+07 0.00317265 1.45663e+07 8.06355e+06 1.47224e+07 158 1.48129e+07 1.25273e+07 0.00315606 1.46704e+07 49.7582 0.0062021 0.995643 0 50.2665 GTEX-15SHU-0626-SM-7KUFH 1 C1 2 pieces; 5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 1111 1209 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984358 392405 0.983215 0.990535 0.888035 19698 1 76 0.0027266 201 0 8.79037e+07 0.0165716 901450 8.87436e+07 7.521e+06 19708 4.35816e+07 0 0.0951799 0.990535 0.87963 8.79037e+07 0.00298752 1.91042e+07 9.41206e+06 1.92787e+07 250 1.95221e+07 1.98173e+07 0.00285624 1.9351e+07 49.7799 0.0101579 0.996712 0 50.2273 GTEX-15SHU-0626-SM-CYKUC 1 C1 2 pieces; 5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 1111 1209 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 RIP-Seq GTEX-15SHU-0726-SM-7KUFI 1 C1 2 pieces; well dissected 7.4 Thyroid Thyroid 0002046 1130 1190 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.99027 255915 0.964698 0.992911 0.756335 24024 1 76 0.00317566 138 0 6.87843e+07 0.0350038 321696 6.92754e+07 6.19146e+06 24054 3.42039e+07 0 0.208364 0.992911 0.750973 6.87843e+07 0.0031524 1.49184e+07 7.82334e+06 1.50956e+07 147 1.51765e+07 1.09744e+07 0.00316406 1.50108e+07 49.7254 0.00464372 0.995551 0 50.2953 GTEX-15SHU-0926-SM-6PAMK 1 C1 2 pieces; 50% adipose 6.5 Heart Heart - Atrial Appendage 0006631 1137 1184 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981415 214141 0.982687 0.988897 0.845394 21648 1 76 0.00298335 368 0 1.02713e+08 0.0171639 5.50893e+06 1.03867e+08 1.17058e+07 21663 5.08736e+07 0 0.137293 0.988897 0.836008 1.02713e+08 0.00538107 2.24009e+07 2.99266e+07 2.25018e+07 356 2.28082e+07 9.23819e+06 0.00417314 2.27191e+07 49.9021 0.0530385 0.99638 0 50.1124 GTEX-15SHU-1026-SM-6PAL7 1 C1 2 pieces; mild eccentric plaque; well trimmed 7 Blood Vessel Artery - Coronary 0001621 1142 1180 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976343 469370 0.963167 0.985531 0.814062 23214 1 76 0.00327137 276 0 1.16205e+08 0.0364954 368432 1.17911e+08 1.43697e+07 23241 5.73909e+07 0 0.149105 0.985531 0.802283 1.16205e+08 0.00621591 2.42375e+07 2.23514e+07 2.43383e+07 323 2.46455e+07 2.24516e+07 0.00472992 2.49132e+07 50.2701 0.00312466 0.994718 0 50.1038 GTEX-15SHU-1126-SM-7KUMB 1 C1 2 pieces 6.5 Heart Heart - Left Ventricle 0006566 1143 1179 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.988727 152587 0.987821 0.990648 0.847037 18262 1 76 0.00299172 264 0 6.78062e+07 0.0121188 4.60868e+06 6.84463e+07 4.5539e+06 18265 3.37657e+07 0 0.140784 0.990648 0.839116 6.78062e+07 0.00405674 1.46558e+07 3.25272e+07 1.50166e+07 260 1.49456e+07 4.05962e+06 0.00352319 1.481e+07 49.7721 0.0673327 0.992568 0 50.6081 GTEX-15SHU-1126-SM-CYKTR 1 C1 2 pieces 6.5 Heart Heart - Left Ventricle 0006566 1143 1179 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 RIP-Seq GTEX-15SHU-1226-SM-718BY 1 C1 6 pieces; no lesions; well trimmed 7.7 Blood Vessel Artery - Aorta 0001496 1145 1178 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.964967 351850 0.975777 0.979158 0.840628 23269 1 76 0.00235716 380 0 1.1912e+08 0.0237737 584542 1.21656e+08 5.78516e+06 23297 5.84701e+07 0 0.135149 0.979158 0.823108 1.1912e+08 0.00545331 2.54547e+07 1.25991e+07 2.54277e+07 349 2.62177e+07 2.41533e+07 0.0038828 2.62816e+07 50.0608 0.00480488 0.993349 0 49.9735 GTEX-15SHU-1226-SM-7KFSO 1 C1 6 pieces; no lesions; well trimmed 7.7 Blood Vessel Artery - Aorta 0001496 1145 1178 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.992915 263362 0.976627 0.993978 0.854647 21476 1 76 0.00280955 214 0 8.93729e+07 0.022921 435359 8.99144e+07 6.72838e+06 21490 4.44779e+07 0 0.12198 0.993978 0.8495 8.93729e+07 0.00269089 1.91278e+07 1.01547e+07 1.94726e+07 232 1.94301e+07 1.86212e+07 0.00275028 1.92756e+07 49.8004 0.00484193 0.99504 0 50.4466 GTEX-15SHU-1426-SM-6LPIN 1 C1 6 pieces; well dissected 7.3 Esophagus Esophagus - Mucosa 0006920 1149 1175 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992237 167780 0.971268 0.994455 0.794207 22015 1 76 0.002655 132 0 6.39781e+07 0.0285247 589281 6.43349e+07 1.02278e+07 22030 3.1859e+07 0 0.177062 0.994455 0.789803 6.39781e+07 0.00367011 1.42927e+07 9.55934e+06 1.42589e+07 147 1.42443e+07 1.05617e+07 0.00316142 1.44448e+07 50.3494 0.00915959 0.996673 0 49.9407 GTEX-15SHU-1526-SM-7KUF5 1 C1 6 pieces; 2 of 6 have fibrofatty submucosal stroma 6.5 Esophagus Esophagus - Muscularis 0004648 1149 1175 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.991331 236786 0.973844 0.993739 0.858273 22038 1 76 0.00296669 274 0 8.65796e+07 0.0259502 1.41047e+06 8.71251e+07 7.39714e+06 22048 4.30594e+07 0 0.115571 0.993739 0.8529 8.65796e+07 0.0030125 1.85014e+07 9.88075e+06 1.86992e+07 281 1.87142e+07 1.5275e+07 0.00298954 1.86821e+07 49.957 0.016189 0.996147 0 50.266 GTEX-15SHU-1626-SM-6M46B 1 C1 6 pieces; 1 of 6 has 20% fibrovascular content on 1 side 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1155 1170 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993316 137822 0.973517 0.994787 0.804179 22111 1 76 0.00246177 142 0 6.64003e+07 0.0262603 593164 6.67483e+07 8.87060e+06 22131 3.30824e+07 0 0.169339 0.994787 0.799986 6.64003e+07 0.00352319 1.43169e+07 7.32792e+06 1.43675e+07 160 1.43369e+07 1.04825e+07 0.0029917 1.44418e+07 50.1823 0.00888658 0.996257 0 50.0883 GTEX-15SHU-1826-SM-7KUKS 2 C1 2 pieces; moderate central passive congestion 7.1 Liver Liver 0001114 1158 1167 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991108 204397 0.969642 0.993167 0.794138 20455 1 76 0.00336896 117 0 5.50281e+07 0.0302698 1.21288e+06 5.54067e+07 4.00983e+06 20468 2.73809e+07 0 0.175504 0.993167 0.788711 5.50281e+07 0.00432792 1.19504e+07 1.01923e+07 1.21149e+07 144 1.21501e+07 5.79176e+06 0.00384745 1.20098e+07 49.7095 0.0218905 0.995226 0 50.3419 GTEX-15SHU-1926-SM-7KUMO 2 C1 2 pieces; well dissected, with 10% external fat 6.6 Adrenal Gland Adrenal Gland 0002369 1163 1163 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991067 561900 0.96159 0.993104 0.794831 24218 1 76 0.00356285 273 0 9.37256e+07 0.038145 1.8173e+06 9.43764e+07 7.36278e+06 24251 4.66502e+07 0 0.16676 0.993104 0.78935 9.37256e+07 0.00422955 2.01671e+07 1.93453e+07 2.05616e+07 277 2.06325e+07 1.40626e+07 0.00389551 2.02826e+07 49.5725 0.0192558 0.995142 0 50.4843 GTEX-15SHU-2326-SM-7KUMC 1 C1 2 pieces 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1169 1159 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991826 192642 0.974662 0.993461 0.826533 23100 1 76 0.00338685 268 0 8.40983e+07 0.0249475 1.7555e+06 8.46518e+07 5.95594e+06 23121 4.18596e+07 0 0.148129 0.993461 0.821129 8.40983e+07 0.00436968 1.84039e+07 1.40475e+07 1.87253e+07 296 1.88032e+07 9.86188e+06 0.00387746 1.84558e+07 49.5337 0.0207379 0.995097 0 50.4328 GTEX-15SHU-2526-SM-6M47D 3 C1 6 pieces; mucosa totally necrotic; muscle intact 6 Colon Colon - Transverse 0001157 1174 1155 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992071 186148 0.972868 0.99389 0.828735 23234 1 76 0.00253411 162 0 7.1876e+07 0.0263495 653730 7.23179e+07 9.03033e+06 23255 3.57807e+07 0 0.144133 0.99389 0.823671 7.1876e+07 0.00376328 1.57014e+07 8.17467e+06 1.57231e+07 183 1.56955e+07 1.15942e+07 0.00314757 1.58568e+07 50.2557 0.00903967 0.995708 0 50.0345 GTEX-15SHU-2926-SM-7KUKT 1 C1 6 pieces 7.2 Vagina Vagina 0000996 1182 1149 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991322 265032 0.97085 0.993098 0.722931 25952 1 76 0.00359753 279 0 1.05278e+08 0.0289215 333057 1.0601e+08 7.57282e+06 26002 5.24032e+07 0 0.247919 0.993098 0.717941 1.05278e+08 0.00456475 2.33262e+07 1.17833e+07 2.34932e+07 268 2.35492e+07 1.62165e+07 0.00408028 2.34559e+07 49.9007 0.00314175 0.994873 0 50.1783 GTEX-15SHU-3026-SM-6LPIB 2 C1 4 pieces 7.2 Brain Brain - Cerebellum 0002037 1205 1126 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992144 164265 0.957092 0.994151 0.747735 23605 1 76 0.00272049 124 0 6.84224e+07 0.0425691 1.29756e+06 6.8825e+07 1.05861e+07 23627 3.4067e+07 0 0.209357 0.994151 0.743361 6.84224e+07 0.003542 1.50127e+07 8.70545e+06 1.49122e+07 157 1.49421e+07 8.74344e+06 0.00313042 1.51063e+07 50.2731 0.018853 0.996158 0 49.832 GTEX-15SHU-3126-SM-6M46H 2 C1 4 pieces 7.3 Brain Brain - Cortex 0001870 1206 1125 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994729 297987 0.962361 0.996024 0.824953 23464 1 76 0.00230989 197 0 7.25029e+07 0.0372874 2.71909e+06 7.27924e+07 9.71752e+06 23479 3.61497e+07 0 0.137408 0.996024 0.821673 7.25029e+07 0.00314413 1.59656e+07 1.75985e+07 1.58487e+07 245 1.58289e+07 8.71771e+06 0.00272647 1.60752e+07 50.386 0.037354 0.997318 0 49.8164 GTEX-15SHV-0002-SM-6RBL7 B1 Blood Whole Blood 0013756 0 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SHV-0002-SM-6UH2K B1 Blood Whole Blood 0013756 0 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SHV-0008-SM-EAZCA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 288 BP-49693 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992792 327371 0.982645 0.993707 0.861866 19776 1 76 0.00170846 150 0 6.96524e+07 0.0170498 196871 7.00934e+07 5.02929e+06 19788 3.47192e+07 0 0.120779 0.993707 0.856443 6.96524e+07 0.00258685 1.57646e+07 6.18536e+06 1.57987e+07 146 1.57982e+07 1.85672e+07 0.00214725 1.58282e+07 50.0474 0.00280869 0.994623 0 50.0539 GTEX-15SHV-0126-SM-6LPIS 1 B1 2 pieces; 8.1 Spleen Spleen 0002106 187 806 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991772 168504 0.963902 0.993871 0.764961 23422 1 76 0.00291605 119 0 6.20797e+07 0.0353963 308984 6.24626e+07 1.01429e+07 23446 3.09035e+07 0 0.198941 0.993871 0.760273 6.20797e+07 0.00376169 1.36619e+07 8.16189e+06 1.3639e+07 133 1.36644e+07 1.03817e+07 0.00333798 1.37584e+07 50.1715 0.00494671 0.99597 0 49.958 GTEX-15SHV-0326-SM-6M475 1 B1 2 pieces; atelectasis 8.6 Lung Lung 0008952 198 795 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994166 152200 0.974712 0.995529 0.824512 23995 1 76 0.00254798 167 0 7.84093e+07 0.0248329 408185 7.87614e+07 1.06551e+07 24022 3.90848e+07 0 0.1502 0.995529 0.820825 7.84093e+07 0.00333971 1.74485e+07 7.02146e+06 1.75101e+07 200 1.75039e+07 1.47778e+07 0.0029433 1.75565e+07 50.075 0.00518255 0.996893 0 50.0881 GTEX-15SHV-0426-SM-6M476 1 B1 2 pieces; 30% & 20% external fibromuscular stroma 7.3 Thyroid Thyroid 0002046 202 791 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993947 158083 0.966536 0.995397 0.784844 24405 1 76 0.00248304 142 0 7.10661e+07 0.033087 337041 7.13948e+07 1.01191e+07 24437 3.54207e+07 0 0.181692 0.995397 0.781231 7.10661e+07 0.00339732 1.55785e+07 8.07482e+06 1.56102e+07 160 1.56201e+07 1.20992e+07 0.00293951 1.56664e+07 50.0741 0.00472081 0.996847 0 50.0508 GTEX-15SHV-0526-SM-7KUEN 1 B1 2 pieces; 20% internal fibrofatty tissue in 1 piece; otherwise well dissected 8 Heart Heart - Atrial Appendage 0006631 205 788 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.9848 428350 0.980273 0.990694 0.857313 23062 1 76 0.00283861 268 0 8.92286e+07 0.0194386 1.3692e+06 9.00667e+07 7.9298e+06 23081 4.42293e+07 0 0.12296 0.990694 0.849335 8.92286e+07 0.00348993 1.94413e+07 9.44098e+06 1.95399e+07 288 1.97332e+07 1.55594e+07 0.00316233 1.97118e+07 49.973 0.015202 0.996589 0 50.1264 GTEX-15SHV-0726-SM-6PAMO 1 B1 2 pieces; mild concentric intimal plaques; 50% & 20% external fat 6.3 Blood Vessel Artery - Coronary 0001621 212 781 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978377 216731 0.97661 0.987153 0.855211 22432 1 76 0.00307722 201 0 8.86785e+07 0.0230119 494001 8.98326e+07 1.04792e+07 22450 4.38288e+07 0 0.121399 0.987153 0.844225 8.86785e+07 0.00583785 1.91469e+07 6.57282e+06 1.90937e+07 203 1.93897e+07 1.83232e+07 0.00444526 1.95942e+07 50.2624 0.00549913 0.99593 0 49.9304 GTEX-15SHV-0826-SM-7KUFA 1 B1 6 pieces; flat plaques on 3 pieces; neurofatty stroma on 3 pieces up to 1.8 mm thick 8 Blood Vessel Artery - Aorta 0001496 214 779 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986423 335736 0.977846 0.991241 0.86096 22415 1 76 0.00272989 277 0 9.22491e+07 0.0217197 235113 9.30643e+07 7.71171e+06 22431 4.57785e+07 0 0.116886 0.991241 0.853418 9.22491e+07 0.00364698 1.98486e+07 6.77765e+06 2.00833e+07 258 2.02474e+07 1.97024e+07 0.00318621 2.01053e+07 49.824 0.00252635 0.996058 0 50.2939 GTEX-15SHV-0926-SM-6M46I 1 B1 6 pieces; 10% & 20% fibrofatty stroma on 2 pieces 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 225 768 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994821 109379 0.977598 0.996115 0.849629 21069 1 76 0.00221039 166 0 6.80647e+07 0.0220992 758282 6.83301e+07 8.77513e+06 21082 3.39392e+07 0 0.127969 0.996115 0.846329 6.80647e+07 0.00304267 1.47495e+07 5.61814e+06 1.47939e+07 169 1.47531e+07 1.25058e+07 0.00262599 1.48718e+07 50.2003 0.0110973 0.99741 0 50.0752 GTEX-15SHV-1126-SM-6PALO 1 B1 6 pieces; submucosal stroma on 2 pieces 8.3 Esophagus Esophagus - Muscularis 0004648 228 765 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982798 238939 0.97956 0.989454 0.864152 23152 1 76 0.0030878 382 0 1.16598e+08 0.0201085 1.33464e+06 1.17841e+08 1.42464e+07 23173 5.77826e+07 0 0.115408 0.989454 0.855039 1.16598e+08 0.00523928 2.51805e+07 1.15051e+07 2.51471e+07 331 2.5437e+07 2.26962e+07 0.0041563 2.56157e+07 50.175 0.0113257 0.996111 0 49.9668 GTEX-15SHV-1526-SM-6LLIB 1 B1 2 pieces; 1 piece has 40% internal fat; other is free of fat 5.9 Pancreas Pancreas 0001150 245 748 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977237 203953 0.982973 0.985849 0.889344 21095 1 76 0.00255051 108 0 8.78125e+07 0.0167272 348409 8.9073e+07 8.05724e+06 21105 4.34392e+07 0 0.0936281 0.985849 0.876759 8.78125e+07 0.00415446 2.02378e+07 3.13925e+07 2.04962e+07 133 2.07138e+07 2.89436e+07 0.00334548 2.08055e+07 50.1104 0.0039115 0.994461 0 50.3173 GTEX-15SHV-1926-SM-6LPI1 1 B1 2 pieces; spermatogenesis 7.1 Testis Testis 0000473 262 731 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991269 211009 0.923637 0.993265 0.733937 32033 1 76 0.00255406 129 0 6.47443e+07 0.0760622 700458 6.51833e+07 1.04189e+07 32085 3.22531e+07 0 0.1897 0.993265 0.728994 6.47443e+07 0.00339663 1.33522e+07 1.18471e+07 1.33133e+07 131 1.33406e+07 1.06754e+07 0.0029745 1.34362e+07 50.1785 0.010746 0.995261 0 49.927 GTEX-15SHV-2226-SM-6M464 0 B1 2 pieces; well dissected 8.4 Salivary Gland Minor Salivary Gland 0006330 273 720 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.988787 139155 0.977612 0.990193 0.836167 22719 1 76 0.00281525 214 0 7.55341e+07 0.0200461 238902 7.62822e+07 1.00864e+07 22741 3.75605e+07 0 0.141445 0.990193 0.827967 7.55341e+07 0.00385163 1.75416e+07 2.56068e+07 1.73646e+07 205 1.73853e+07 1.32401e+07 0.00333271 1.76249e+07 50.3421 0.00313182 0.991599 0 49.7465 GTEX-15SHV-2426-SM-6PAMF 0 B1 6 pieces; subcutaneous fat up to 1.6 mm thick; up to 10% dermal fat 7 Skin Skin - Sun Exposed (Lower leg) 0004264 286 707 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.973958 203637 0.980888 0.983451 0.878359 23414 1 76 0.0032265 237 0 1.04006e+08 0.0188082 654509 1.05757e+08 1.29552e+07 23436 5.13787e+07 0 0.102529 0.983451 0.863823 1.04006e+08 0.00654644 2.27053e+07 1.3205e+07 2.27821e+07 245 2.31835e+07 2.42715e+07 0.00487045 2.32914e+07 50.1161 0.00618883 0.992943 0 50.0844 GTEX-15SHV-2526-SM-6PAMG 1 B1 2 pieces; 0% & 20% internal fat content 9.4 Muscle Muscle - Skeletal 0011907 291 702 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.984007 176037 0.984327 0.990068 0.892325 20227 1 76 0.00296235 280 0 9.8497e+07 0.015398 1.59758e+06 9.94851e+07 1.04384e+07 20239 4.88722e+07 0 0.0920018 0.990068 0.883462 9.8497e+07 0.00507165 2.17924e+07 1.02711e+07 2.17644e+07 283 2.20279e+07 2.19504e+07 0.00401054 2.21108e+07 50.0939 0.0160584 0.996129 0 49.9679 GTEX-15SHV-5001-SM-AN446 B1 Lung Lung 0008952 205 ChIP-Seq GTEX-15SHV-5004-SM-AN444 B1 Heart Heart - Left Ventricle 0006566 213 ChIP-Seq GTEX-15SHV-5019-SM-AN447 B1 Muscle Muscle - Skeletal 0011907 294 ChIP-Seq GTEX-15SHW-0004-SM-6RBKO C1 Blood Whole Blood 0013756 419 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SHW-0004-SM-6UH2L C1 Blood Whole Blood 0013756 419 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SHW-0008-SM-EAZ33 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 575 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993554 849132 0.957728 0.994461 0.821493 21166 1 76 0.001782 226 0 1.01614e+08 0.041922 316714 1.0218e+08 8.00962e+06 21188 5.06533e+07 0 0.136235 0.994461 0.816943 1.01614e+08 0.00254561 2.22524e+07 3.41487e+07 2.26925e+07 228 2.27166e+07 2.60451e+07 0.00216346 2.23247e+07 49.565 0.00309956 0.995368 0 50.4896 GTEX-15SHW-0226-SM-7LTAT 1 C1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 491 1003 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989791 866518 0.960828 0.992448 0.820119 24644 1 76 0.00277549 283 0 1.05743e+08 0.0388853 1.21537e+06 1.06548e+08 1.16546e+07 24667 5.25849e+07 0 0.140709 0.992448 0.813926 1.05743e+08 0.00405749 2.29428e+07 3.36037e+07 2.31829e+07 282 2.33198e+07 2.04168e+07 0.00341477 2.30774e+07 49.7388 0.0114068 0.995105 0 50.2602 GTEX-15SHW-0326-SM-6PAML 1 C1 6 pieces; well trimmed, epidermis measures 34 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 573 921 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980316 248993 0.974304 0.987604 0.80845 25365 1 76 0.00345278 288 0 1.06491e+08 0.0254045 918239 1.07828e+08 1.31398e+07 25402 5.27336e+07 0 0.165854 0.987604 0.798428 1.06491e+08 0.00577852 2.34426e+07 1.00844e+07 2.34277e+07 279 2.37969e+07 2.04501e+07 0.00460707 2.3843e+07 50.0484 0.0085158 0.994892 0 49.9841 GTEX-15SHW-0626-SM-6PALH 1 C1 2 pieces 6.1 Blood Vessel Artery - Tibial 0007610 578 918 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.976836 203578 0.970934 0.985613 0.796941 24203 1 76 0.00343461 280 0 1.07745e+08 0.0287331 1.09852e+06 1.09318e+08 1.21511e+07 24244 5.32198e+07 0 0.173992 0.985613 0.785476 1.07745e+08 0.00622579 2.30831e+07 9.17052e+06 2.3054e+07 269 2.33914e+07 1.85853e+07 0.00481777 2.36408e+07 50.2651 0.0100488 0.994391 0 49.9684 GTEX-15SHW-0726-SM-7KUEI 1 C1 2 pieces 8.8 Muscle Muscle - Skeletal 0011907 589 907 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984736 313861 0.978929 0.990864 0.860424 20971 1 76 0.00301553 161 0 7.60157e+07 0.0207862 1.88222e+06 7.67166e+07 6.62508e+06 20982 3.76816e+07 0 0.118505 0.990864 0.852563 7.60157e+07 0.0034853 1.62379e+07 7.19469e+06 1.64346e+07 165 1.66542e+07 1.68881e+07 0.00324896 1.64432e+07 49.6811 0.0245347 0.996991 0 50.301 GTEX-15SHW-0926-SM-6LPIO 1 C1 2 pieces; changes compatible with ARDS 5.8 Lung Lung 0008952 619 878 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990605 157095 0.968779 0.992838 0.747439 23570 1 76 0.00295473 115 0 5.81448e+07 0.0310108 499352 5.85642e+07 8.81465e+06 23594 2.89318e+07 0 0.22134 0.992838 0.742086 5.81448e+07 0.00393172 1.289e+07 7.73885e+06 1.28398e+07 126 1.28256e+07 8.84154e+06 0.00344212 1.30293e+07 50.394 0.00852657 0.99507 0 49.9024 GTEX-15SHW-1226-SM-6M46C 2 C1 2 pieces; mild to moderate autolysis, some fragmentation of fibers, hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 626 872 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994229 77373 0.989258 0.995767 0.86591 17566 1 76 0.00354124 261 0 6.85793e+07 0.0107119 9.0087e+06 6.88708e+07 9.15761e+06 17570 3.41996e+07 0 0.123348 0.995767 0.862245 6.85793e+07 0.00468097 1.52892e+07 2.82449e+07 1.50729e+07 271 1.47013e+07 2.30478e+06 0.00411023 1.57437e+07 51.7119 0.130806 0.997305 0 49.6438 GTEX-15SHW-1326-SM-6PAL8 2 C1 2 pieces; predominantly fat with fibrous tissue with rare duct 5.9 Breast Breast - Mammary Tissue 0008367 628 871 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.975491 265517 0.972561 0.984123 0.741328 26242 1 76 0.00366505 281 0 1.14023e+08 0.0271432 2.23206e+06 1.15862e+08 1.28232e+07 26302 5.63069e+07 0 0.231234 0.984123 0.729557 1.14023e+08 0.00637511 2.51005e+07 1.44562e+07 2.50078e+07 281 2.54431e+07 1.6576e+07 0.00500819 2.56282e+07 50.1812 0.0192648 0.992754 0 49.9075 GTEX-15SHW-1726-SM-6LPJ2 2 C1 2 pieces; predominantly fat with ~10% fibrovascular tissue with inflammatory cells and hemosiderin-laden macrophages 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 635 865 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.987434 164974 0.976658 0.989574 0.772994 22754 1 76 0.00359739 114 0 5.78619e+07 0.0212885 370359 5.84715e+07 8.89462e+06 22777 2.87365e+07 0 0.203664 0.989574 0.764935 5.78619e+07 0.00449765 1.30415e+07 1.04778e+07 1.3022e+07 116 1.30617e+07 1.11132e+07 0.00404654 1.31243e+07 50.1195 0.006334 0.991715 0 49.9626 GTEX-15SHW-1926-SM-7KUKU 2 C1 6 pieces; muscularis with rare cluster of submucosal glands 5.7 Esophagus Esophagus - Muscularis 0004648 637 864 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990857 251289 0.969825 0.99265 0.779129 24491 1 76 0.00363997 276 0 1.00465e+08 0.0299538 1.1012e+06 1.01209e+08 7.13438e+06 24527 4.99862e+07 0 0.190697 0.99265 0.773402 1.00465e+08 0.00479284 2.15183e+07 1.05628e+07 2.17308e+07 294 2.1731e+07 1.52205e+07 0.00421537 2.1692e+07 49.955 0.0108805 0.994444 0 50.2456 GTEX-15SHW-2026-SM-7KULX 1 C1 6 pieces 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 639 863 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.990185 211356 0.968884 0.992032 0.770385 23778 1 76 0.00306738 141 0 7.32572e+07 0.0308832 828821 7.38457e+07 4.58963e+06 23808 3.64286e+07 0 0.198498 0.992032 0.764247 7.32572e+07 0.00417232 1.59134e+07 7.01993e+06 1.60458e+07 164 1.60607e+07 1.1168e+07 0.00361882 1.60296e+07 49.9514 0.0112237 0.993878 0 50.2071 GTEX-15SHW-2126-SM-6M46Y 3 C1 6 pieces; full thickness sections (mucosa is moderately to severely autolyzed, muscularis moderately autolyzed) 6.2 Stomach Stomach 0000945 640 862 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992771 111381 0.976539 0.994364 0.77368 22993 1 76 0.00270033 132 0 6.33853e+07 0.0232116 616725 6.37445e+07 8.11511e+06 23017 3.15765e+07 0 0.202858 0.994364 0.769319 6.33853e+07 0.00375113 1.40289e+07 6.86533e+06 1.40379e+07 145 1.40214e+07 1.01134e+07 0.00322489 1.4147e+07 50.2228 0.00967495 0.995956 0 50.016 GTEX-15SKB-0002-SM-6RBL4 C1 Blood Whole Blood 0013756 441 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SKB-0002-SM-6UH2I C1 Blood Whole Blood 0013756 441 BP-49550 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/18/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SKB-0008-SM-EAZ36 C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 448 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.994134 588303 0.98092 0.994859 0.861925 21785 1 76 0.00172153 290 0 1.15409e+08 0.0187652 344785 1.16005e+08 9.53636e+06 21809 5.75548e+07 0 0.118995 0.994859 0.857494 1.15409e+08 0.00242665 2.5987e+07 1.2474e+07 2.61664e+07 310 2.61767e+07 3.11178e+07 0.00207384 2.60632e+07 49.8913 0.00297215 0.995584 0 50.172 GTEX-15SKB-0326-SM-6M477 1 C1 2 pieces, reduced spermatogenesis 6.3 Testis Testis 0000473 452 1079 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992421 162257 0.937157 0.993952 0.727134 30385 1 76 0.00250769 124 0 6.00734e+07 0.0626267 1.46216e+06 6.04389e+07 8.01641e+06 30427 2.99355e+07 0 0.210023 0.993952 0.722737 6.00734e+07 0.00343992 1.28516e+07 7.81972e+06 1.28203e+07 135 1.28514e+07 7.99606e+06 0.00297309 1.29047e+07 50.1034 0.0241924 0.995483 0 49.9391 GTEX-15SKB-0426-SM-6PALQ 0 C1 2 pieces, trace adherent fat 7.4 Nerve Nerve - Tibial 0001323 535 996 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980073 189110 0.969721 0.987653 0.757747 25189 1 76 0.00329779 220 0 9.69041e+07 0.0300035 248398 9.81154e+07 1.12923e+07 25234 4.79571e+07 0 0.211975 0.987653 0.748391 9.69041e+07 0.00573925 2.12106e+07 9.86924e+06 2.1158e+07 224 2.14742e+07 1.56314e+07 0.00450915 2.16139e+07 50.1622 0.00253169 0.995233 0 49.938 GTEX-15SKB-0526-SM-6PAMP 0 C1 2 pieces, subtotally occlusive atherosis, rep delineated 5.8 Blood Vessel Artery - Tibial 0007610 539 993 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978996 283427 0.970349 0.986748 0.757578 25594 1 76 0.00341215 279 0 1.07626e+08 0.0292452 254315 1.09072e+08 1.18794e+07 25642 5.32114e+07 0 0.212771 0.986748 0.747538 1.07626e+08 0.00585825 2.35156e+07 1.02202e+07 2.34037e+07 256 2.37692e+07 1.85267e+07 0.00462559 2.39589e+07 50.1987 0.00233163 0.9945 0 49.8807 GTEX-15SKB-0826-SM-7KUFB 1 C1 2 pieces, mild congestion 6.3 Lung Lung 0008952 546 987 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988711 372449 0.965651 0.99138 0.751518 25555 1 76 0.00332857 166 0 8.7083e+07 0.0340574 349310 8.78402e+07 7.55823e+06 25590 4.32536e+07 0 0.214133 0.99138 0.74504 8.7083e+07 0.00354813 1.89373e+07 1.01141e+07 1.92369e+07 202 1.9315e+07 1.32295e+07 0.00343805 1.90856e+07 49.7014 0.00397665 0.994048 0 50.3924 GTEX-15SKB-0926-SM-7KUFC 1 C1 2 pieces, no abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 549 984 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985459 294719 0.97815 0.990078 0.798785 21797 1 76 0.00317039 198 0 8.71456e+07 0.0216385 8.49512e+06 8.8019e+07 8.31215e+06 21818 4.32308e+07 0 0.179365 0.990078 0.790859 8.71456e+07 0.00331349 1.88232e+07 8.62527e+06 1.90795e+07 254 1.92278e+07 1.25662e+07 0.00324161 1.90533e+07 49.7721 0.0965146 0.994696 0 50.3381 GTEX-15SKB-1626-SM-6PAL6 1 C1 2 pieces, minimal fascia/vascular elements 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 571 966 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977916 280859 0.974262 0.986404 0.787699 25116 1 76 0.00328073 378 0 1.2115e+08 0.0254036 622113 1.2282e+08 1.33261e+07 25155 5.98846e+07 0 0.186563 0.986404 0.77699 1.2115e+08 0.00599297 2.65568e+07 1.38124e+07 2.64789e+07 352 2.69249e+07 2.17618e+07 0.00462518 2.71248e+07 50.185 0.00506524 0.994892 0 49.9265 GTEX-15SKB-2526-SM-6PALP 0 C1 2 pieces, ~10-20% interstitial fat/vascular elements, rep delineated 8.2 Muscle Muscle - Skeletal 0011907 606 935 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980771 257237 0.982975 0.988839 0.882853 20526 1 76 0.00288087 376 0 1.11312e+08 0.016826 3.23304e+06 1.12568e+08 1.29471e+07 20541 5.51115e+07 0 0.100123 0.988839 0.872999 1.11312e+08 0.00555786 2.42344e+07 1.2702e+07 2.42887e+07 345 2.46209e+07 2.15509e+07 0.00420845 2.47491e+07 50.1299 0.0287206 0.996906 0 50.0559 GTEX-15SKB-2826-SM-6PAMH 0 C1 6 pieces, squamous epithelium is ~30-40 microns; minimal dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 612 931 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980273 174090 0.979286 0.987654 0.816841 23163 1 76 0.00332624 191 0 8.60226e+07 0.0203672 670324 8.70979e+07 1.03858e+07 23197 4.25703e+07 0 0.162446 0.987654 0.806756 8.60226e+07 0.00578248 1.88175e+07 9.47547e+06 1.871e+07 191 1.89921e+07 1.65372e+07 0.00454518 1.91656e+07 50.2273 0.00769622 0.995035 0 49.8567 GTEX-15SZO-0004-SM-6RBLK C1 Blood Whole Blood 0013756 990 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15SZO-0004-SM-6UH2X C1 Blood Whole Blood 0013756 990 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15SZO-0008-SM-EAZ38 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1093 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.994086 947311 0.980914 0.994868 0.859269 21822 1 76 0.00170607 387 0 1.37788e+08 0.0187525 361606 1.38499e+08 1.09173e+07 21849 6.86939e+07 0 0.121644 0.994868 0.85486 1.37788e+08 0.00247444 3.11264e+07 1.60171e+07 3.12469e+07 338 3.13137e+07 3.65148e+07 0.00208995 3.11716e+07 49.8863 0.00261089 0.99565 0 50.0966 GTEX-15SZO-0011-R10a-SM-AHZN9 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1009 ChIP-Seq GTEX-15SZO-1226-SM-6LPIP 1 C1 2 pieces, diffuse macrovesicular steatosis, ~90% parenchymal involvement 5.9 Liver Liver 0001114 1126 684 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992434 197689 0.967093 0.994496 0.823528 19784 1 76 0.00277939 120 0 5.55414e+07 0.0328116 1.14849e+06 5.58488e+07 8.50909e+06 19798 2.76715e+07 0 0.143565 0.994496 0.818995 5.55414e+07 0.00365661 1.21841e+07 1.29384e+07 1.2145e+07 149 1.20715e+07 5.80336e+06 0.00321709 1.23649e+07 50.6003 0.0205643 0.996557 0 49.9195 GTEX-15TU5-0004-SM-6RBKZ C1 Blood Whole Blood 0013756 596 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15TU5-0004-SM-6UH2D C1 Blood Whole Blood 0013756 596 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-15TU5-0011-R10b-SM-793BL C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 592 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6379 01/14/2015 TruSeq.v1 EXCLUDE 0.995169 653695 0.959285 0.996185 0.835401 23714 1 76 0.00303893 198 0 7.67683e+07 0.0399936 2.63591e+06 7.70623e+07 1.0458e+07 23731 3.82505e+07 0 0.123884 0.996185 0.832214 7.67683e+07 0.0033132 1.67868e+07 1.85441e+07 1.68431e+07 242 1.6871e+07 1.10766e+07 0.00317592 1.68377e+07 49.9507 0.0342049 0.997201 0 50.0837 GTEX-15TU5-0011-R10b-SM-CYKU3 C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 592 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 RIP-Seq GTEX-15TU5-0011-R1a-SM-7938S C1, A1 8.5 Brain Brain - Hippocampus 0001954 592 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 EXCLUDE 0.993634 597548 0.955933 0.994873 0.832868 22616 1 76 0.00243683 154 0 6.19515e+07 0.0437492 3.65381e+06 6.22708e+07 4.75747e+06 22629 3.08353e+07 0 0.123065 0.994873 0.828597 6.19515e+07 0.00305624 1.34855e+07 1.60281e+07 1.35961e+07 187 1.36016e+07 6.06889e+06 0.00274615 1.35577e+07 49.9191 0.0586762 0.996111 0 50.2042 GTEX-15TU5-0011-R8b-SM-793BM C1, A1 7.8 Brain Brain - Hypothalamus 0001898 592 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6379 01/14/2015 TruSeq.v1 EXCLUDE 0.994654 1.1312e+06 0.956748 0.995759 0.823389 25809 1 76 0.00304098 374 0 1.2015e+08 0.0427915 4.38055e+06 1.20662e+08 1.65584e+07 25839 5.98673e+07 0 0.133359 0.995759 0.819897 1.2015e+08 0.00337225 2.61023e+07 3.33675e+07 2.6369e+07 333 2.63039e+07 1.5929e+07 0.00320643 2.62984e+07 49.9948 0.0363044 0.996864 0 50.2542 GTEX-15TU5-0126-SM-7KUM2 2 C1 2 pieces 7.1 Thyroid Thyroid 0002046 676 499 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.991334 394600 0.966453 0.992883 0.767262 25424 1 76 0.00346945 205 0 9.49261e+07 0.0331828 599778 9.56065e+07 6.43634e+06 25461 4.72321e+07 0 0.199191 0.992883 0.761802 9.49261e+07 0.00441331 2.07698e+07 9.62230e+06 2.08958e+07 215 2.09834e+07 1.5747e+07 0.00394064 2.0831e+07 49.8177 0.0062734 0.994433 0 50.1512 GTEX-15TU5-0226-SM-6PALR 1 C1 6 pieces; up to 1 mm subcutaneous fat on 3 of 6; virtually no dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 679 496 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.979166 215002 0.966118 0.987096 0.773055 25863 1 76 0.00339813 303 0 1.10209e+08 0.0336359 504501 1.1165e+08 1.321e+07 25904 5.45359e+07 0 0.193063 0.987096 0.76308 1.10209e+08 0.00602026 2.383e+07 1.17273e+07 2.38516e+07 314 2.42185e+07 1.77668e+07 0.00469866 2.43117e+07 50.0961 0.00451861 0.995027 0 50.0226 GTEX-15TU5-0326-SM-6PALS 1 C1 2 pieces; 10% fibrous content 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 681 494 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.978903 181976 0.974311 0.98691 0.816696 24246 1 76 0.0033793 219 0 9.6457e+07 0.0253458 1.00410e+06 9.77363e+07 1.0871e+07 24276 4.77104e+07 0 0.157615 0.98691 0.806006 9.6457e+07 0.00595993 2.12117e+07 9.43402e+06 2.11197e+07 244 2.14383e+07 1.67999e+07 0.00465914 2.16421e+07 50.2366 0.0102736 0.994918 0 49.8913 GTEX-15TU5-0426-SM-6PALT 1 C1 2 pieces; 5% internal and external fat content 7.3 Nerve Nerve - Tibial 0001323 682 493 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.980403 242443 0.968668 0.987509 0.764519 25301 1 76 0.00345138 302 0 1.02609e+08 0.0309791 476268 1.03907e+08 1.24641e+07 25346 5.08045e+07 0 0.20415 0.987509 0.754969 1.02609e+08 0.00579482 2.25565e+07 9.99104e+06 2.25381e+07 256 2.28541e+07 1.68554e+07 0.00461467 2.29553e+07 50.1105 0.00458359 0.994615 0 49.9796 GTEX-15TU5-0626-SM-7KUFJ 1 C1 2 pieces; 1 piece shows vacuolization and atrophy with 25% internal fibrous content; other is largely normal 6.6 Muscle Muscle - Skeletal 0011907 685 491 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.99074 310513 0.978399 0.993771 0.858089 20802 1 76 0.00272146 138 0 7.44869e+07 0.0212319 659184 7.49538e+07 6.01555e+06 20814 3.70345e+07 0 0.12031 0.993771 0.852744 7.44869e+07 0.00316776 1.56394e+07 6.74782e+06 1.58983e+07 150 1.59927e+07 1.75688e+07 0.00294393 1.575e+07 49.6178 0.00879454 0.996802 0 50.4105 GTEX-15TU5-0626-SM-CYKUD 1 C1 2 pieces; 1 piece shows vacuolization and atrophy with 25% internal fibrous content; other is largely normal 6.6 Muscle Muscle - Skeletal 0011907 685 491 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 RIP-Seq GTEX-15TU5-1126-SM-6M47J 1 C1 2 pieces 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 695 487 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.993133 164012 0.980444 0.994804 0.820589 22462 1 76 0.00258786 140 0 6.6822e+07 0.0191869 429309 6.7171e+07 8.76372e+06 22479 3.32892e+07 0 0.159855 0.994804 0.816325 6.6822e+07 0.00362572 1.48429e+07 7.32586e+06 1.48793e+07 149 1.48937e+07 1.31396e+07 0.00310592 1.49369e+07 50.0725 0.00639129 0.996476 0 50.0612 GTEX-15TU5-1226-SM-6PAMI 1 C1 2 pieces; 50 & 20% fibroadipose content; venous elements admixed in 1 piece 5.9 Blood Vessel Artery - Coronary 0001621 699 484 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.980435 184904 0.978109 0.98783 0.794263 23345 1 76 0.00340862 208 0 9.78539e+07 0.021496 667712 9.90594e+07 1.15816e+07 23373 4.84173e+07 0 0.183846 0.98783 0.784597 9.78539e+07 0.0057809 2.13434e+07 9.19842e+06 2.13018e+07 226 2.15846e+07 1.73076e+07 0.00458588 2.17564e+07 50.1981 0.00674052 0.995226 0 49.9513 GTEX-15TU5-1426-SM-7KUN6 1 C1 2 pieces 6.1 Heart Heart - Left Ventricle 0006566 702 482 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.984873 283423 0.985181 0.986676 0.806848 22149 1 76 0.00394803 369 0 1.32454e+08 0.0147344 8.39789e+06 1.34242e+08 9.4222e+06 22166 6.59475e+07 0 0.178333 0.986676 0.796097 1.32454e+08 0.00476363 2.83876e+07 8.05268e+07 2.89478e+07 367 2.91568e+07 9.35508e+06 0.00435508 2.83895e+07 49.3333 0.0625578 0.988479 0 50.4885 GTEX-15TU5-1426-SM-CYKTT 1 C1 2 pieces 6.1 Heart Heart - Left Ventricle 0006566 702 482 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 RIP-Seq GTEX-15TU5-2226-SM-6LPI2 2 C1 6 pieces; tubules main site of autolysis; no sign of active or chronic disease 6 Kidney Kidney - Cortex 0001225 715 473 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.99247 304735 0.961392 0.994616 0.82755 21886 1 76 0.00305339 120 0 5.89876e+07 0.0384529 4.31566e+06 5.93069e+07 8.9663e+06 21898 2.93834e+07 0 0.133842 0.994616 0.823094 5.89876e+07 0.0040884 1.30694e+07 1.99726e+07 1.29769e+07 162 1.29013e+07 5.35442e+06 0.00356978 1.3264e+07 50.6932 0.0727683 0.996762 0 49.8225 GTEX-15TU5-2326-SM-7KUDT 1 C1 2 pieces; all fibromuscular stroma, no glands; 1 has band of urethral mucosa on 1 side [marked]; other piece has one end with admixed skeletal muscle [circled] 7.4 Prostate Prostate 0002367 718 471 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.989818 246197 0.975451 0.992725 0.821963 23585 1 76 0.00308867 141 0 7.67098e+07 0.0242151 614643 7.7272e+07 6.88478e+06 23603 3.81399e+07 0 0.153489 0.992725 0.815982 7.67098e+07 0.0032362 1.66736e+07 7.95639e+06 1.6911e+07 160 1.7025e+07 1.62737e+07 0.00316222 1.67666e+07 49.6177 0.00795428 0.995632 0 50.3535 GTEX-15TU5-2426-SM-7KUDU 1 C1 6 pieces; 1 has focal foreign body reaction, 0.27mm [marked] 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 718 471 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.98225 325197 0.976137 0.986742 0.787762 24575 1 76 0.00320484 174 0 8.41255e+07 0.023542 402998 8.52558e+07 7.23697e+06 24608 4.17234e+07 0 0.188375 0.986742 0.777318 8.41255e+07 0.00384969 1.84977e+07 8.00642e+06 1.8689e+07 188 1.8868e+07 1.48344e+07 0.0035258 1.8683e+07 49.7536 0.00472693 0.991234 0 50.2572 GTEX-15TU5-2626-SM-7KUKK 2 C1 6 pieces; small autolyzed mucosal remnant (1.6 x 0.2 mm) on 1 piece [marked] 7 Colon Colon - Sigmoid 0001159 729 462 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.991311 456873 0.974683 0.993067 0.805164 24304 1 76 0.00369096 276 0 1.07745e+08 0.025031 1.00051e+06 1.08497e+08 8.29574e+06 24337 5.3592e+07 0 0.169519 0.993067 0.799582 1.07745e+08 0.00452268 2.33598e+07 1.08024e+07 2.36291e+07 318 2.36555e+07 1.81589e+07 0.00410609 2.35136e+07 49.8497 0.00922156 0.994824 0 50.2865 GTEX-15TU5-2726-SM-6M47I 3 C1 6 pieces; mucosa largely autpolyzed 5.9 Colon Colon - Transverse 0001157 731 461 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.991833 105069 0.971187 0.99331 0.811914 23571 1 76 0.0030431 134 0 6.56505e+07 0.0277546 1.01081e+06 6.60926e+07 8.94992e+06 23588 3.26762e+07 0 0.159273 0.99331 0.806482 6.56505e+07 0.00403416 1.44585e+07 7.86814e+06 1.44676e+07 163 1.44502e+07 8.98228e+06 0.00353789 1.45694e+07 50.2054 0.0152938 0.994786 0 50.0157 GTEX-15TU5-2926-SM-7KUML 3 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 735 458 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990669 1.29875e+06 0.923489 0.992619 0.748059 24796 1 76 0.0033548 200 0 8.82843e+07 0.0760926 2.1085e+06 8.89408e+07 5.79846e+06 24822 4.39377e+07 0 0.17543 0.992619 0.742537 8.82843e+07 0.00449761 1.85758e+07 4.68726e+07 1.88335e+07 250 1.88818e+07 1.07048e+07 0.00392508 1.87029e+07 49.762 0.0237068 0.994568 0 50.3445 GTEX-15UF6-0001-SM-6RBL5 C1 Blood Whole Blood 0013756 530 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15UF6-0001-SM-6UH2E C1 Blood Whole Blood 0013756 530 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15UF6-0008-SM-EAZCB C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 588 BP-49791 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993423 388959 0.980963 0.994198 0.857317 20268 1 76 0.00171341 223 0 9.80923e+07 0.018729 173064 9.86648e+07 7.14934e+06 20289 4.89126e+07 0 0.123645 0.994198 0.852343 9.80923e+07 0.00247334 2.20917e+07 1.0649e+07 2.21913e+07 254 2.21973e+07 2.56441e+07 0.00209308 2.2162e+07 49.9602 0.00175406 0.994972 0 50.1125 GTEX-15UF6-0011-R10a-SM-AHZLZ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 537 ChIP-Seq GTEX-15UF6-0011-R10b-SM-9OSVF C1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 537 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990704 1.24317e+06 0.951191 0.993433 0.8325 21906 1 76 0.00270912 369 0 1.16917e+08 0.0486633 1.44269e+07 1.1769e+08 1.05246e+07 21915 5.82026e+07 0 0.118692 0.993433 0.827032 1.16917e+08 0.00401683 2.48602e+07 6.5983e+07 2.55986e+07 349 2.52864e+07 7.0093e+06 0.00336118 2.54044e+07 50.1163 0.122584 0.996161 0 50.7317 GTEX-15UF6-0011-R1a-SM-9QEGH C1, A1 6.2 Brain Brain - Hippocampus 0001954 537 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989762 995102 0.943466 0.993228 0.807643 22261 1 76 0.00210994 268 0 8.2905e+07 0.0562709 7.21836e+06 8.34702e+07 4.24596e+06 22281 4.12351e+07 0 0.135823 0.993228 0.802174 8.2905e+07 0.0041055 1.76803e+07 3.76242e+07 1.81643e+07 308 1.80454e+07 6.4173e+06 0.00310424 1.80367e+07 49.9881 0.0864783 0.996694 0 50.6751 GTEX-15UF6-0126-SM-6PAMB 1 C1 2 pieces; scattered ducts and atrophic lobules; >50% fat 7.4 Breast Breast - Mammary Tissue 0008367 577 1368 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979356 226730 0.97402 0.987081 0.750706 25338 1 76 0.00342857 216 0 1.01062e+08 0.025558 343667 1.02384e+08 1.18311e+07 25385 4.99884e+07 0 0.223314 0.987081 0.741008 1.01062e+08 0.00591351 2.21798e+07 1.06335e+07 2.21465e+07 220 2.24872e+07 1.68718e+07 0.00466132 2.2601e+07 50.1262 0.00335663 0.994806 0 49.9624 GTEX-15UF6-0226-SM-7KUF6 1 C1 6 pieces; flat plaques; thick adventitia [0.7mm] on 3 of 6 pieces 5.9 Blood Vessel Artery - Aorta 0001496 578 1367 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986957 262169 0.97197 0.990523 0.776541 23670 1 76 0.00344654 168 0 8.2754e+07 0.0276432 318020 8.35458e+07 7.88006e+06 23701 4.10651e+07 0 0.195428 0.990523 0.769181 8.2754e+07 0.00342211 1.76973e+07 8.2948e+06 1.79613e+07 186 1.80748e+07 1.423e+07 0.00343437 1.78699e+07 49.715 0.00380654 0.994088 0 50.3702 GTEX-15UF6-0726-SM-6PALI 1 C1 2 pieces; minimal plaque; 25% external fat 7 Blood Vessel Artery - Tibial 0007610 587 1360 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979119 190302 0.973533 0.987069 0.797078 23609 1 76 0.0033068 279 0 1.04363e+08 0.0261382 351128 1.0573e+08 1.15554e+07 23646 5.16199e+07 0 0.176455 0.987069 0.786771 1.04363e+08 0.00585806 2.26039e+07 9.57577e+06 2.25402e+07 260 2.28783e+07 1.92729e+07 0.00457215 2.30553e+07 50.1928 0.00332098 0.995018 0 49.9294 GTEX-15UF6-0826-SM-6PALJ 1 C1 6 pieces; well trimmed; 5% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 588 1360 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977089 207378 0.979085 0.985405 0.824062 24144 1 76 0.00334978 386 0 1.14764e+08 0.0206657 1.07168e+06 1.16464e+08 1.40939e+07 24172 5.67422e+07 0 0.155023 0.985405 0.812035 1.14764e+08 0.0061344 2.53383e+07 1.32728e+07 2.53768e+07 332 2.57494e+07 2.23234e+07 0.00473034 2.5912e+07 50.1573 0.00920186 0.993721 0 50.038 GTEX-15UF6-1026-SM-7KUF7 1 C1 2 pieces; 10% fat content 7.3 Muscle Muscle - Skeletal 0011907 590 1359 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.990436 234819 0.981263 0.993378 0.857315 20287 1 76 0.00299026 214 0 8.11389e+07 0.0185386 1.57767e+06 8.16798e+07 6.76427e+06 20299 4.03647e+07 0 0.123948 0.993378 0.851638 8.11389e+07 0.00329815 1.80672e+07 9.94698e+06 1.80296e+07 252 1.81922e+07 1.43552e+07 0.00314375 1.81084e+07 49.8846 0.0193153 0.99632 0 49.9479 GTEX-15UF6-1126-SM-6LPJ3 2 C1 2 pieces; 20% fibrous content in 1 piece 6.7 Thyroid Thyroid 0002046 592 1357 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990149 192140 0.965749 0.992427 0.767177 23022 1 76 0.00266935 135 0 6.67815e+07 0.0339718 137759 6.72911e+07 1.07821e+07 23047 3.3249e+07 0 0.198572 0.992427 0.761367 6.67815e+07 0.00361465 1.45969e+07 7.85851e+06 1.45911e+07 139 1.46134e+07 1.22819e+07 0.00314092 1.47215e+07 50.1843 0.00204721 0.994704 0 49.9901 GTEX-15UF6-1826-SM-6LLI9 2 C1 2 pieces; 5% fat 6.3 Pancreas Pancreas 0001150 604 1349 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977357 227193 0.968317 0.985825 0.78446 22810 1 76 0.00266697 141 0 8.46243e+07 0.0315033 307369 8.58412e+07 7.68733e+06 22839 4.18543e+07 0 0.183857 0.985825 0.77334 8.46243e+07 0.00417508 1.89417e+07 1.52469e+07 1.90741e+07 149 1.93737e+07 1.94995e+07 0.00341455 1.93671e+07 49.9915 0.00358067 0.994293 0 50.1741 GTEX-15UF6-1926-SM-7KUDV 1 C1 6 pieces; well trimmed; 1% dermal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 605 1348 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984272 370324 0.981143 0.989495 0.798381 23364 1 76 0.00328225 228 0 9.27906e+07 0.018595 769469 9.37758e+07 8.8961e+06 23397 4.60026e+07 0 0.182762 0.989495 0.789994 9.27906e+07 0.00353986 2.05088e+07 1.00524e+07 2.07592e+07 239 2.09766e+07 1.70233e+07 0.00341038 2.07623e+07 49.7433 0.00820541 0.994718 0 50.3033 GTEX-15UF6-2026-SM-6LPI3 1 C1 2 pieces; atrophic; corpora albicantia comprise 20 & 10% 6.9 Ovary Ovary 0000992 606 1348 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.99071 184269 0.968838 0.992903 0.713657 21453 1 76 0.0026847 133 0 6.48392e+07 0.0309117 130550 6.53026e+07 9.47352e+06 21487 3.2268e+07 0 0.255181 0.992903 0.708592 6.48392e+07 0.0036 1.42104e+07 9.95755e+06 1.42388e+07 128 1.42305e+07 1.17281e+07 0.00314134 1.4359e+07 50.2249 0.00199916 0.995097 0 50.05 GTEX-15UF6-2126-SM-6M46Z 1 C1 6 pieces; atrophic and partially sloughed epithelium 6 Vagina Vagina 0000996 609 1345 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992393 122299 0.966398 0.993846 0.721972 23551 1 76 0.00261256 147 0 7.62005e+07 0.0333605 455067 7.66724e+07 1.06031e+07 23583 3.79562e+07 0 0.244425 0.993846 0.717529 7.62005e+07 0.00354586 1.6742e+07 7.88456e+06 1.6746e+07 164 1.67165e+07 1.14013e+07 0.00307853 1.68798e+07 50.243 0.00593521 0.995298 0 50.006 GTEX-15UF6-2226-SM-6M471 1 C1 6 pieces; 1 piece is 90% submucosa with embedded ingested food [arrowed]; 2 others have 40% submucosa [circled] 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 614 1341 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993209 118133 0.964919 0.994661 0.779202 22345 1 76 0.00251374 127 0 5.93117e+07 0.0349032 744782 5.96301e+07 8.18367e+06 22368 2.95552e+07 0 0.185717 0.994661 0.775041 5.93117e+07 0.00352846 1.28141e+07 6.15255e+06 1.28332e+07 144 1.27866e+07 8.44762e+06 0.00302036 1.2947e+07 50.3117 0.01249 0.996113 0 50.0372 GTEX-15UF6-2326-SM-6M465 2 C1 6 pieces; moderate epithelium sloughing 6.8 Esophagus Esophagus - Mucosa 0006920 616 1339 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993549 119382 0.9694 0.995139 0.79521 23303 1 76 0.00243489 144 0 6.44716e+07 0.0304245 545557 6.47865e+07 8.77711e+06 23320 3.21325e+07 0 0.17419 0.995139 0.791345 6.44716e+07 0.00358148 1.4268e+07 7.14016e+06 1.4308e+07 154 1.42712e+07 1.0445e+07 0.00300727 1.44112e+07 50.2441 0.00842084 0.996729 0 50.0701 GTEX-15UF6-2426-SM-7KUME 1 C1 6 pieces; well dissected muscle 5.8 Esophagus Esophagus - Muscularis 0004648 617 1339 BP-50666 RNA Extraction from Paxgene-derived Lysate Plate Based 03/19/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.988258 328835 0.968042 0.990148 0.801203 24066 1 76 0.00353709 274 0 1.04081e+08 0.0317525 1.44944e+06 1.05117e+08 7.84459e+06 24095 5.17975e+07 0 0.166839 0.990148 0.79331 1.04081e+08 0.00433468 2.2322e+07 1.0944e+07 2.26617e+07 323 2.26496e+07 1.57861e+07 0.00393512 2.25251e+07 49.8622 0.0137889 0.992039 0 50.3776 GTEX-15UF6-2626-SM-6M466 3 C1 6 pieces; mucosa autolyzed, muscle intact 5.9 Colon Colon - Transverse 0001157 619 1338 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99383 116167 0.972707 0.995292 0.842167 22382 1 76 0.00246766 146 0 6.56582e+07 0.0266772 283136 6.59687e+07 8.28364e+06 22394 3.27105e+07 0 0.13054 0.995292 0.838203 6.56582e+07 0.00358116 1.4226e+07 6.70114e+06 1.42842e+07 162 1.42305e+07 1.16443e+07 0.00302359 1.43751e+07 50.2527 0.00429197 0.996754 0 50.1021 GTEX-15UF6-2726-SM-7KULY 1 C1 6 pieces; muscle with focal submucosal elements 6.4 Colon Colon - Sigmoid 0001159 621 1336 BP-50640 RNA Extraction from Paxgene-derived Lysate Plate Based 03/18/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990756 251351 0.972542 0.99266 0.808044 23133 1 76 0.00336107 165 0 7.86255e+07 0.0271847 806362 7.92069e+07 5.73562e+06 23155 3.91117e+07 0 0.164499 0.99266 0.802113 7.86255e+07 0.00459159 1.69044e+07 7.63386e+06 1.7098e+07 177 1.7101e+07 1.41514e+07 0.00397515 1.70564e+07 49.9347 0.0101805 0.994564 0 50.2847 GTEX-15UF6-3026-SM-7KUKL 1 C1 4 pieces 5.9 Brain Brain - Cortex 0001870 652 1307 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.987533 697861 0.956523 0.989722 0.818889 22980 1 76 0.00348794 370 0 9.25695e+07 0.0432445 8.59661e+06 9.35307e+07 6.26253e+06 22999 4.60659e+07 0 0.137634 0.989722 0.810473 9.25695e+07 0.00475751 1.9764e+07 4.13045e+07 2.02662e+07 337 2.01256e+07 7.60219e+06 0.00412132 2.00621e+07 49.921 0.0919122 0.991911 0 50.6272 GTEX-15UF6-3026-SM-CYKTB 1 C1 4 pieces 5.9 Brain Brain - Cortex 0001870 652 1307 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 RIP-Seq GTEX-15UF6-3126-SM-6M46J 2 C1 1 piece; anterior & posterior present [marked] 5.9 Pituitary Pituitary 0000007 653 1306 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99302 174928 0.953956 0.994535 0.735688 24445 1 76 0.00259433 134 0 6.83693e+07 0.0458475 643234 6.8745e+07 9.55844e+06 24478 3.40682e+07 0 0.218267 0.994535 0.731668 6.83693e+07 0.00367902 1.4645e+07 9.07297e+06 1.47255e+07 153 1.47213e+07 9.12588e+06 0.00313585 1.47464e+07 50.0426 0.00935681 0.99605 0 50.137 GTEX-15UF7-0003-SM-6RBLL B1 Blood Whole Blood 0013756 -55 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15UF7-0003-SM-6UH2Y B1 Blood Whole Blood 0013756 -55 BP-49718 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15UF7-0008-SM-EAZ37 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 447 BP-53407 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993668 853511 0.97046 0.994534 0.836655 21675 1 76 0.00172051 227 0 1.0338e+08 0.0291935 418765 1.03948e+08 7.87472e+06 21695 5.15243e+07 0 0.133805 0.994534 0.832082 1.0338e+08 0.00251609 2.28907e+07 1.93535e+07 2.30956e+07 247 2.31077e+07 2.56027e+07 0.00211796 2.29788e+07 49.8602 0.0040286 0.995399 0 50.2228 GTEX-15UF7-0726-SM-6M46D 1 B1 2 pieces; predominanlty fat with 20-30% fibrous tissue, no ductal elements seen 6.8 Breast Breast - Mammary Tissue 0008367 284 1344 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99384 156012 0.976322 0.995552 0.821546 21507 1 76 0.00238868 127 0 5.79913e+07 0.023428 284157 5.82505e+07 7.04189e+06 21521 2.88976e+07 0 0.154776 0.995552 0.817891 5.79913e+07 0.00367287 1.27577e+07 5.19049e+06 1.27564e+07 143 1.27233e+07 1.01348e+07 0.00302967 1.28883e+07 50.3221 0.00487819 0.997264 0 49.9974 GTEX-15UF7-0826-SM-6M46E 1 B1 2 pieces; from 10-50% fat, mild autolysis and interstitial fibrosis, numerous well preserved islets 7.9 Pancreas Pancreas 0001150 286 1342 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994917 138632 0.972664 0.996358 0.819079 21226 1 76 0.00254706 106 0 6.65941e+07 0.0271832 193422 6.68375e+07 9.41129e+06 21244 3.32075e+07 0 0.153586 0.996358 0.816096 6.65941e+07 0.00357575 1.51612e+07 1.41767e+07 1.52973e+07 109 1.52499e+07 1.78063e+07 0.00306066 1.53094e+07 50.0972 0.00289391 0.9978 0 50.2234 GTEX-15UF7-0926-SM-6M46F 0 B1 6 pieces; includes few clusters of submucosal glands and lymphoid aggregates 9.6 Esophagus Esophagus - Mucosa 0006920 296 1332 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994 139151 0.977516 0.995226 0.821089 21831 1 76 0.00253642 148 0 7.15475e+07 0.0220758 498730 7.18907e+07 9.94309e+06 21848 3.56756e+07 0 0.156428 0.995226 0.817168 7.15475e+07 0.00333376 1.61355e+07 1.04298e+07 1.61208e+07 159 1.61295e+07 1.44369e+07 0.0029346 1.62122e+07 50.1279 0.00693734 0.996451 0 49.9772 GTEX-15UF7-1226-SM-6M46G 1 B1 6 pieces; full thickness sections 6.9 Stomach Stomach 0000945 314 1314 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.990284 121857 0.977068 0.992007 0.815968 22367 1 76 0.00264024 279 0 7.0701e+07 0.0225959 1.06075e+06 7.12707e+07 9.31499e+06 22387 3.52296e+07 0 0.161101 0.992007 0.809446 7.0701e+07 0.00397221 1.61557e+07 6.02439e+07 1.63422e+07 203 1.63358e+07 1.56582e+07 0.00330507 1.62827e+07 49.9187 0.0148834 0.99373 0 50.2869 GTEX-15UF7-1326-SM-7KUKV 1 B1 6 pieces; ~50% muscularis, ~50% submucosa/serosa, fragments of bone 8.3 Colon Colon - Sigmoid 0001159 304 1324 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992051 308110 0.975359 0.993903 0.821661 23771 1 76 0.00338436 278 0 9.96664e+07 0.0243395 786701 1.00278e+08 7.38627e+06 23799 4.96316e+07 0 0.153698 0.993903 0.816652 9.96664e+07 0.0039878 2.17317e+07 9.52234e+06 2.19193e+07 276 2.1961e+07 1.74455e+07 0.00368552 2.1863e+07 49.8882 0.00784522 0.995756 0 50.215 GTEX-15UF7-1526-SM-6LPI7 1 B1 2 pieces; from 50-70% fat/fibrous, few collections of predominantly chronic inflammatory cells 9.2 Heart Heart - Atrial Appendage 0006631 324 1304 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.993732 147717 0.97935 0.995653 0.844603 22023 1 76 0.00251036 154 0 7.07566e+07 0.0203456 1.09919e+06 7.10655e+07 1.05613e+07 22036 3.52594e+07 0 0.134747 0.995653 0.840932 7.07566e+07 0.00328836 1.55007e+07 8.40676e+06 1.52876e+07 177 1.52758e+07 1.25103e+07 0.00289861 1.56406e+07 50.5899 0.0154673 0.997575 0 49.6539 GTEX-15UF7-1926-SM-6LPJT 0 B1 2 pieces 6.4 Spleen Spleen 0002106 341 1287 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990779 178023 0.965464 0.992975 0.749931 22979 1 76 0.00323695 114 0 5.69247e+07 0.033276 338389 5.73274e+07 8.66553e+06 23007 2.83096e+07 0 0.215533 0.992975 0.744663 5.69247e+07 0.00411683 1.26325e+07 9.40578e+06 1.25961e+07 120 1.26179e+07 8.92539e+06 0.00367592 1.27307e+07 50.2225 0.00590274 0.995171 0 49.9278 GTEX-15UF7-2226-SM-6PAMQ 1 B1 2 pieces; includes up to 10% internal fat 7.4 Muscle Muscle - Skeletal 0011907 451 1177 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.985463 192648 0.982686 0.990987 0.870169 21508 1 76 0.0031185 284 0 1.20493e+08 0.0170551 1.05293e+06 1.21589e+08 1.47073e+07 21524 5.981e+07 0 0.112517 0.990987 0.862326 1.20493e+08 0.00496734 2.60732e+07 1.22028e+07 2.62215e+07 322 2.64489e+07 2.40975e+07 0.00403777 2.64753e+07 50.0249 0.00865978 0.996511 0 50.1418 GTEX-15UF7-2326-SM-7KUFO 1 B1 2 pieces; small attachment of fat on 1 piece 6.7 Blood Vessel Artery - Tibial 0007610 452 1176 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984453 309455 0.974617 0.989795 0.820441 22056 1 76 0.00302038 168 0 8.36884e+07 0.0250614 436774 8.45512e+07 7.34712e+06 22076 4.14801e+07 0 0.154176 0.989795 0.812069 8.36884e+07 0.00373638 1.79006e+07 6.88873e+06 1.8147e+07 197 1.8299e+07 1.59923e+07 0.00337645 1.81696e+07 49.8227 0.00516579 0.995138 0 50.3418 GTEX-15UF7-5013-SM-AN449 B1 Muscle Muscle - Skeletal 0011907 466 ChIP-Seq GTEX-15UKP-0003-SM-6RBJ5 B1 Blood Whole Blood 0013756 -54 BP-49752 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-15UKP-0003-SM-6UH1I B1 Blood Whole Blood 0013756 -54 BP-49752 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-15UKP-0008-SM-EAZ3A B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 481 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.994543 782557 0.979857 0.995166 0.862375 22743 1 76 0.00171062 397 0 1.47819e+08 0.0198144 585779 1.48537e+08 1.01091e+07 22775 7.37181e+07 0 0.117482 0.995166 0.858206 1.47819e+08 0.00223228 3.31467e+07 1.56444e+07 3.33515e+07 340 3.33663e+07 3.90734e+07 0.00197128 3.32281e+07 49.8962 0.00394366 0.995788 0 50.154 GTEX-15UKP-0226-SM-7KFTD 1 B1 2 pieces; includes up to 10% internal/external fat 6 Nerve Nerve - Tibial 0001323 476 1094 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988459 397561 0.976719 0.99144 0.784286 24285 1 76 0.00262684 278 0 1.02229e+08 0.0230062 284538 1.03112e+08 7.31869e+06 24326 5.08069e+07 0 0.192433 0.99144 0.777572 1.02229e+08 0.00327164 2.24755e+07 9.54833e+06 2.27759e+07 284 2.28221e+07 1.77092e+07 0.00294827 2.27277e+07 49.8964 0.00275952 0.99442 0 50.332 GTEX-15UKP-0326-SM-7KUFP 0 B1 2 pieces; minimal internal fat 8 Muscle Muscle - Skeletal 0011907 479 1091 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984045 428882 0.984054 0.989506 0.88892 19424 1 76 0.00266486 214 0 8.51067e+07 0.0157525 1.73272e+06 8.60093e+07 7.33130e+06 19432 4.22201e+07 0 0.0951342 0.989506 0.879591 8.51067e+07 0.00313243 1.85338e+07 8.25605e+06 1.86858e+07 250 1.89089e+07 1.82116e+07 0.00289735 1.8736e+07 49.7704 0.0201457 0.994966 0 50.2043 GTEX-15UKP-0426-SM-7KUFQ 1 B1 6 pieces; predominantly well trimmed with minimal internal/external fat, epidermis measures 40 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 481 1089 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984654 417039 0.974972 0.989926 0.771466 24752 1 76 0.00307257 223 0 9.50422e+07 0.0247979 903463 9.60094e+07 8.5993e+06 24786 4.7131e+07 0 0.203506 0.989926 0.763694 9.50422e+07 0.00357236 2.0992e+07 9.90722e+06 2.12672e+07 237 2.15127e+07 1.68826e+07 0.00332114 2.12333e+07 49.6731 0.00941015 0.995198 0 50.3256 GTEX-15UKP-0526-SM-7KFRO 0 B1 2 pieces; mature fat with minimal fibrovascular component, 1 has multiple central defects (?poor fixation) 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 483 1087 BP-51304 RNA Extraction from Paxgene-derived Lysate Plate Based 04/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991286 273810 0.978895 0.99367 0.841414 21670 1 76 0.00278092 167 0 7.36107e+07 0.0208238 380834 7.40797e+07 5.86232e+06 21686 3.6611e+07 0 0.137481 0.99367 0.836087 7.36107e+07 0.00279792 1.62325e+07 6.77332e+06 1.65122e+07 188 1.65203e+07 1.31855e+07 0.0027894 1.63933e+07 49.8071 0.00514087 0.996054 0 50.4272 GTEX-15UKP-1326-SM-6LPI8 1 B1 2 pieces; minimal attached fat 7.2 Pancreas Pancreas 0001150 562 1008 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992863 148335 0.974105 0.995003 0.833824 20976 1 76 0.0027644 102 0 6.71868e+07 0.0256998 224247 6.75242e+07 9.95897e+06 20990 3.34628e+07 0 0.140282 0.995003 0.829657 6.71868e+07 0.00379668 1.53621e+07 1.59187e+07 1.5424e+07 111 1.53901e+07 1.8385e+07 0.00327943 1.55371e+07 50.2376 0.00332099 0.997144 0 50.1006 GTEX-15UKP-1426-SM-7KUDX 0 B1 2 pieces 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 563 1007 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988316 352894 0.979194 0.992063 0.835067 22685 1 76 0.00299521 272 0 8.58827e+07 0.0205552 605622 8.65698e+07 7.79585e+06 22703 4.26671e+07 0 0.144127 0.992063 0.828439 8.58827e+07 0.00302709 1.89631e+07 8.53096e+06 1.91896e+07 265 1.93359e+07 1.47545e+07 0.00301109 1.91131e+07 49.7103 0.00699577 0.99581 0 50.2967 GTEX-15UKP-1526-SM-6PAL9 0 B1 6 pieces; well trimmed 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 569 1001 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 EXCLUDE 0.979122 281612 0.973448 0.987173 0.771161 25760 1 76 0.00317222 379 0 1.20123e+08 0.0263047 1.74024e+06 1.21684e+08 1.33282e+07 25813 5.94209e+07 0 0.202287 0.987173 0.761269 1.20123e+08 0.00573608 2.67009e+07 1.19539e+07 2.65611e+07 347 2.69851e+07 1.96137e+07 0.00444369 2.72238e+07 50.2202 0.0143013 0.995223 0 49.8688 GTEX-15UKP-1926-SM-6LPI9 1 B1 2 pieces; includes pleura (target is 1cm below pleura), hemorrhage, edema 8.2 Lung Lung 0008952 602 968 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992365 170014 0.974648 0.994387 0.772692 23302 1 76 0.00259494 136 0 7.11572e+07 0.0250768 259527 7.15588e+07 1.13963e+07 23338 3.54393e+07 0 0.201956 0.994387 0.768355 7.11572e+07 0.00341337 1.58272e+07 7.14724e+06 1.58121e+07 156 1.58069e+07 1.20764e+07 0.00300332 1.59674e+07 50.2525 0.00362676 0.99641 0 49.9762 GTEX-15UKP-2026-SM-6LPIC 2 B1 6 pieces; some residual attached fibrous/vascular tissue 6.8 Esophagus Esophagus - Muscularis 0004648 618 952 BP-51043 RNA Extraction from Paxgene-derived Lysate Plate Based 04/01/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992451 128714 0.972336 0.994627 0.815921 21852 1 76 0.00250682 135 0 6.04796e+07 0.027467 758836 6.08063e+07 8.53954e+06 21867 3.01188e+07 0 0.156415 0.994627 0.811538 6.04796e+07 0.0036098 1.32141e+07 6.30003e+06 1.31941e+07 147 1.31532e+07 9.30125e+06 0.0030571 1.33754e+07 50.4188 0.0124796 0.996803 0 49.9621 GTEX-15UKP-5010-SM-AN44O B1 Lung Lung 0008952 604 ChIP-Seq GTEX-169BO-0003-SM-6RBL1 B1 Blood Whole Blood 0013756 -52 BP-49752 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-169BO-0003-SM-6UH2W B1 Blood Whole Blood 0013756 -52 BP-49752 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-169BO-0008-SM-EAZ32 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 154 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.994117 459793 0.982842 0.994793 0.87328 21305 1 76 0.00166265 296 0 1.08975e+08 0.0168095 316632 1.09545e+08 8.6272e+06 21319 5.4353e+07 0 0.109562 0.994793 0.868733 1.08975e+08 0.00233452 2.44794e+07 1.15907e+07 2.47044e+07 284 2.46851e+07 2.99757e+07 0.00199836 2.45706e+07 49.8837 0.00289042 0.995469 0 50.2288 GTEX-169BO-0126-SM-79OLS 1 B1 2 pieces, no abnormalities 7.1 Spleen Spleen 0002106 112 1028 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.972213 303572 0.957552 0.976059 0.748504 23456 1 76 0.00683508 118 0 6.64203e+07 0.0355372 301771 6.80494e+07 1.51457e+07 23483 3.27688e+07 0 0.209047 0.976059 0.730584 6.64203e+07 0.00817827 1.46233e+07 2.18713e+07 1.47319e+07 131 1.48366e+07 8.71198e+06 0.00750403 1.47646e+07 49.8785 0.00443458 0.979905 0 50.185 GTEX-169BO-0226-SM-79OL1 1 B1 2 pieces patchy chronic, focally acute pneumonitis 7.1 Lung Lung 0008952 114 1026 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977974 172675 0.968062 0.981962 0.757319 23629 1 76 0.00504421 112 0 5.63244e+07 0.0316252 359990 5.7359e+07 1.29441e+07 23650 2.80154e+07 0 0.210743 0.981962 0.743658 5.63244e+07 0.00650699 1.23802e+07 5.28922e+06 1.24677e+07 121 1.25114e+07 8.23307e+06 0.00577263 1.25457e+07 50.0685 0.00627608 0.98595 0 50.1761 GTEX-169BO-0326-SM-7EPIM 1 B1 2 pieces, no abnormalities, trace adherent fat, delineated 6.9 Thyroid Thyroid 0002046 115 1025 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99059 151822 0.965253 0.992784 0.717765 24887 1 76 0.00304654 114 0 8.55993e+07 0.0345062 314185 8.62215e+07 1.1343e+07 24932 4.26512e+07 0 0.247487 0.992784 0.712586 8.55993e+07 0.0113697 1.86706e+07 8.33996e+06 1.88264e+07 136 1.88688e+07 1.23799e+07 0.0071989 1.87992e+07 49.9076 0.00364393 0.994977 0 50.2078 GTEX-169BO-0426-SM-7EPI1 1 B1 2 pieces, no abnormalities 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 117 1023 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990804 124138 0.975072 0.993164 0.822037 22937 1 76 0.00291744 125 0 7.62718e+07 0.0246985 773062 7.67968e+07 9.86099e+06 22953 3.80097e+07 0 0.153034 0.993164 0.816418 7.62718e+07 0.0113148 1.66841e+07 8.58261e+06 1.69997e+07 143 1.69805e+07 1.20128e+07 0.00710613 1.68626e+07 49.8258 0.0100663 0.995523 0 50.4684 GTEX-169BO-0526-SM-793AK 1 B1 6 pieces, squamous mucosa up to ~0.25mm, ~15% thickness 9 Esophagus Esophagus - Mucosa 0006920 119 1021 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.99272 464744 0.976766 0.993559 0.79064 21840 1 76 0.00213146 133 0 5.99852e+07 0.0229628 199003 6.0374e+07 3.98032e+06 21856 2.98543e+07 0 0.186126 0.993559 0.785547 5.99852e+07 0.00265261 1.36021e+07 7.00184e+06 1.35434e+07 133 1.36686e+07 1.138e+07 0.00239182 1.35261e+07 49.738 0.00329617 0.994397 0 49.8918 GTEX-169BO-1126-SM-7MGWN 1 B1 2 pieces, fibroadipose parenchymal elements, no ductal elements 5.6 Breast Breast - Mammary Tissue 0008367 145 995 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989717 84501 0.975841 0.991882 0.839636 21445 1 76 0.00240281 152 0 6.36886e+07 0.0239375 1.3428e+06 6.42098e+07 4.8681e+06 21462 3.17203e+07 0 0.136205 0.991882 0.83282 6.36886e+07 0.00339349 1.40083e+07 6.08949e+06 1.41156e+07 171 1.41028e+07 9.30968e+06 0.00289707 1.41463e+07 50.0769 0.0209127 0.994047 0 50.1908 GTEX-169BO-1326-SM-9MQK2 0 B1 6 pieces, trace adherent dermal fat; squamous epithelium is ~30-40 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 155 985 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.982907 312198 0.964717 0.985391 0.753074 23645 1 76 0.00565865 142 0 6.53033e+07 0.0351464 502215 6.62715e+07 8.11171e+06 23670 3.24825e+07 0 0.211642 0.985391 0.742073 6.53033e+07 0.00710082 1.4202e+07 6.98706e+06 1.44131e+07 139 1.44e+07 9.3467e+06 0.00637792 1.43697e+07 49.9474 0.00757815 0.987876 0 50.3689 GTEX-169BO-1426-SM-9MQJT 0 B1 2 pieces, ~10% fascia, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 157 983 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985544 307358 0.972189 0.987667 0.799232 22975 1 76 0.00537703 146 0 7.179e+07 0.0275942 465497 7.26864e+07 8.303e+06 23001 3.57366e+07 0 0.172956 0.987667 0.789376 7.179e+07 0.00679003 1.57143e+07 6.61507e+06 1.59083e+07 155 1.59081e+07 1.15533e+07 0.00608201 1.58554e+07 49.917 0.00640418 0.98979 0 50.3068 GTEX-169BO-1526-SM-9KNVR 0 B1 2 pieces, interstitial fat/vascular elements ~25% specimen, rep delineated 8 Muscle Muscle - Skeletal 0011907 160 980 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994434 265154 0.978106 0.995503 0.844166 21794 1 76 0.00223999 286 0 1.10849e+08 0.0216976 1.85125e+06 1.1135e+08 1.30149e+07 21811 5.52791e+07 0 0.13394 0.995503 0.84037 1.10849e+08 0.00299959 2.43066e+07 1.59623e+07 2.47828e+07 316 2.46554e+07 1.92298e+07 0.00261938 2.45315e+07 49.8741 0.0166255 0.996572 0 50.4849 GTEX-169BO-1726-SM-9MQLX 0 B1 2 pieces, rims of adherent fat, 1-1.5mm 5.9 Nerve Nerve - Tibial 0001323 170 970 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984659 292824 0.959326 0.986982 0.723852 23842 1 76 0.00562157 140 0 6.81036e+07 0.0404994 533761 6.90019e+07 8.40223e+06 23874 3.38678e+07 0 0.235474 0.986982 0.714429 6.81036e+07 0.00740048 1.4807e+07 6.28418e+06 1.49743e+07 146 1.49691e+07 8.17876e+06 0.00650893 1.49613e+07 49.9869 0.00773545 0.989305 0 50.2809 GTEX-169BO-5013-SM-AN44D B1 Muscle Muscle - Skeletal 0011907 170 ChIP-Seq GTEX-16A39-0004-SM-6RBLC B1 Blood Whole Blood 0013756 -29 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16A39-0004-SM-6UH2P B1 Blood Whole Blood 0013756 -29 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16A39-0008-SM-EAZC9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 581 BP-49843 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993299 595287 0.981032 0.994277 0.858729 21416 1 76 0.00168109 293 0 1.10084e+08 0.0186345 366942 1.10718e+08 8.04003e+06 21441 5.48738e+07 0 0.122303 0.994277 0.853814 1.10084e+08 0.00264104 2.47437e+07 1.18465e+07 2.47802e+07 279 2.4816e+07 2.95821e+07 0.00216059 2.48135e+07 49.9975 0.0033142 0.995254 0 50.0369 GTEX-16A39-0726-SM-7KUEB 2 B1 2 pieces; myometrium with scant glandular component in one piece (arrowed), ? lower uterine segment 7 Uterus Uterus 0000995 507 1149 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986785 320729 0.972672 0.990845 0.814304 23656 1 76 0.0031441 212 0 8.59442e+07 0.0270297 139135 8.67382e+07 7.29071e+06 23676 4.26708e+07 0 0.158368 0.990845 0.806849 8.59442e+07 0.00321326 1.86232e+07 8.32556e+06 1.88775e+07 209 1.90011e+07 1.65916e+07 0.00317854 1.88395e+07 49.7864 0.00160408 0.994905 0 50.3391 GTEX-16A39-1026-SM-6LPJU 1 B1 6 pieces; surface epithelium desquamation and focal epithelial dissociation; squamous mucosa ~ 0.3mm thick; submucosal mucus glands and focal lymphocytic aggregates in submucosa; taken at GE junction (not target region 4 cm above), small leiomyoma 8.2 Esophagus Esophagus - Mucosa 0006920 516 1140 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991065 143789 0.980895 0.993524 0.872681 21214 1 76 0.00257736 127 0 5.4321e+07 0.0186704 330106 5.46751e+07 8.91266e+06 21226 2.70424e+07 0 0.108214 0.993524 0.867029 5.4321e+07 0.00367844 1.21931e+07 7.12196e+06 1.22177e+07 124 1.22144e+07 1.27355e+07 0.00312654 1.23271e+07 50.2296 0.0060376 0.995982 0 50.0504 GTEX-16A39-1226-SM-7KUEQ 1 B1 6 pieces; well trimmed target muscularis 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 523 1133 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.98807 317010 0.976804 0.992011 0.867031 21955 1 76 0.00299165 210 0 8.29757e+07 0.0228904 419715 8.36439e+07 7.53493e+06 21964 4.11976e+07 0 0.109773 0.992011 0.860104 8.29757e+07 0.0031319 1.77422e+07 7.15751e+06 1.79645e+07 230 1.80597e+07 1.65983e+07 0.00306149 1.79524e+07 49.851 0.00501788 0.995952 0 50.3112 GTEX-16A39-1426-SM-6LLI6 2 B1 6 pieces; autolyzed mucosa and abundant lymphoid component, several pieces include significant muscularis (not target) 6.1 Small Intestine Small Intestine - Terminal Ileum 0001211 527 1129 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.977735 212410 0.960824 0.985847 0.75637 25426 1 76 0.00276916 168 0 8.68719e+07 0.0385063 272634 8.81191e+07 7.54649e+06 25466 4.29495e+07 0 0.204454 0.985847 0.745666 8.68719e+07 0.00416992 1.88878e+07 1.03866e+07 1.88999e+07 192 1.91692e+07 1.43161e+07 0.00346378 1.93026e+07 50.1733 0.00309393 0.993959 0 50.016 GTEX-16A39-5001-SM-AN44B B1 Lung Lung 0008952 480 ChIP-Seq GTEX-16A39-5016-SM-AN44C B1 Muscle Muscle - Skeletal 0011907 674 ChIP-Seq GTEX-16AAH-0003-SM-6RBLI B1 Blood Whole Blood 0013756 -92 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16AAH-0003-SM-6UH2V B1 Blood Whole Blood 0013756 -92 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16AAH-0005-SM-7P8RD B1 6.2 Blood Whole Blood 0013756 -92 BP-49977 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.889549 640343 0.955088 0.934231 0.791518 18406 1 76 0.00418956 97 0 6.99512e+07 0.0433732 341034 7.48757e+07 1.08944e+07 18411 3.31582e+07 0 0.163571 0.934231 0.739461 6.99512e+07 0.0118617 1.52286e+07 9.1843e+07 1.49e+07 111 1.66724e+07 1.56601e+07 0.00784217 1.68119e+07 50.2084 0.00455467 0.978914 0 49.4547 GTEX-16AAH-0008-SM-EAZC5 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 248 BP-49937 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992569 455890 0.982112 0.993664 0.868181 20927 1 76 0.00174003 225 0 9.65943e+07 0.0175494 373934 9.72102e+07 7.54425e+06 20945 4.8143e+07 0 0.113931 0.993664 0.86268 9.65943e+07 0.00290455 2.18019e+07 9.48165e+06 2.18805e+07 227 2.19018e+07 2.63979e+07 0.00232165 2.18836e+07 49.9792 0.00384665 0.994759 0 50.09 GTEX-16AAH-0226-SM-793A8 1 B1 2 pieces, cortex, ~1mm focus of well-preserved medulla (delineated) 9.6 Adrenal Gland Adrenal Gland 0002369 131 502 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.99086 552994 0.976404 0.991751 0.844025 20974 1 76 0.00231981 122 0 5.29146e+07 0.0232065 1.22882e+06 5.33548e+07 5.2362e+06 20987 2.62479e+07 0 0.132378 0.991751 0.837063 5.29146e+07 0.00296003 1.17803e+07 4.82098e+06 1.1726e+07 135 1.18912e+07 9.39276e+06 0.00263963 1.16603e+07 49.5097 0.0230312 0.992642 0 49.8844 GTEX-16AAH-0326-SM-7DHML 1 B1 2 pieces, 2 small lymphcyitic aggregates 8 Thyroid Thyroid 0002046 138 495 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989752 130240 0.970074 0.991086 0.78924 23903 1 76 0.00384377 162 0 7.80651e+07 0.0288871 329351 7.87672e+07 5.91651e+06 23936 3.88446e+07 0 0.180834 0.991086 0.782205 7.80651e+07 0.00548849 1.72619e+07 8.71912e+06 1.74096e+07 166 1.74407e+07 1.37068e+07 0.00466502 1.73222e+07 49.8296 0.00418132 0.992421 0 50.213 GTEX-16AAH-0426-SM-7DUFM 1 B1 2 pieces, diffuse chronic and subacute marked congestion. Patchy bronchial metaplasia 7.4 Lung Lung 0008952 144 489 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992959 352148 0.97334 0.994073 0.796288 25039 1 76 0.00288854 274 0 1.01904e+08 0.0262818 786638 1.02512e+08 8.91984e+06 25079 5.07683e+07 0 0.177052 0.994073 0.791569 1.01904e+08 0.00432499 2.25967e+07 8.98143e+06 2.2871e+07 287 2.28834e+07 1.67368e+07 0.00360596 2.26912e+07 49.7892 0.00767366 0.995187 0 50.3016 GTEX-16AAH-0626-SM-793C9 0 B1 6 pieces, squamous epithelium is ~45-50 microns, no significant adherent fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 166 467 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.987579 302894 0.973986 0.988984 0.817559 22270 1 76 0.00304284 167 0 6.49254e+07 0.0258016 825884 6.56486e+07 9.45234e+06 22291 3.23442e+07 0 0.156427 0.988984 0.808553 6.49254e+07 0.00377294 1.42896e+07 8.11251e+06 1.43722e+07 155 1.43868e+07 1.08266e+07 0.00340737 1.43635e+07 49.9596 0.0125804 0.990389 0 50.1442 GTEX-16AAH-0726-SM-793A9 1 B1 6 pieces, squamous mucosa is ~0.15mm, ~10-15% thickness 9.5 Esophagus Esophagus - Mucosa 0006920 173 460 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991883 536445 0.976703 0.992804 0.825029 21447 1 76 0.00219453 132 0 5.62653e+07 0.0229447 352617 5.66731e+07 4.94990e+06 21461 2.79501e+07 0 0.151674 0.992804 0.819092 5.62653e+07 0.00282346 1.27092e+07 6.0494e+06 1.26058e+07 132 1.27799e+07 1.12113e+07 0.00250871 1.25884e+07 49.6225 0.00622194 0.993725 0 49.7958 GTEX-16AAH-0826-SM-7LT9V 1 B1 6 pieces, confirmed target muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 176 457 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991049 268569 0.977705 0.993429 0.84769 22099 1 76 0.00258343 169 0 6.90944e+07 0.0219484 758027 6.95514e+07 7.25556e+06 22111 3.43643e+07 0 0.130015 0.993429 0.84212 6.90944e+07 0.00370383 1.51793e+07 6.69707e+06 1.52795e+07 168 1.53589e+07 1.29569e+07 0.00314228 1.52528e+07 49.8267 0.0108988 0.995808 0 50.1645 GTEX-16AAH-0926-SM-7939B 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 178 455 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993285 383672 0.97761 0.994137 0.855901 20647 1 76 0.00213063 148 0 5.51523e+07 0.0220196 550119 5.54776e+07 4.36458e+06 20657 2.74278e+07 0 0.121709 0.994137 0.850883 5.51523e+07 0.00278102 1.20656e+07 4.05734e+06 1.20462e+07 142 1.21202e+07 1.04291e+07 0.00245554 1.20381e+07 49.83 0.00991606 0.99499 0 49.9597 GTEX-16AAH-1226-SM-79OO9 1 B1 6 pieces, mucosa is ~1mm, 20-30% of thickness 6.6 Stomach Stomach 0000945 183 450 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.9915 108821 0.980232 0.991832 0.855015 21476 1 76 0.00307618 208 0 6.07889e+07 0.0192813 1.25847e+06 6.12896e+07 3.53326e+06 21488 3.02761e+07 0 0.125217 0.991832 0.84803 6.07889e+07 0.00437679 1.38353e+07 3.52764e+07 1.4088e+07 163 1.40461e+07 1.32385e+07 0.00372627 1.38933e+07 49.7266 0.0205332 0.992163 0 50.4525 GTEX-16AAH-1326-SM-7KFRG 1 B1 6 pieces, well preserved mucosa, ~10% of thickness 7 Colon Colon - Transverse 0001157 184 449 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.98936 382195 0.972765 0.991907 0.799357 24089 1 76 0.00312375 229 0 8.80643e+07 0.0264327 1.93019e+06 8.87828e+07 6.38036e+06 24121 4.37559e+07 0 0.173408 0.991907 0.792888 8.80643e+07 0.00346297 1.95092e+07 9.61628e+06 1.97727e+07 247 1.98116e+07 1.27127e+07 0.00329293 1.96742e+07 49.8261 0.0217406 0.994454 0 50.3354 GTEX-16AAH-1426-SM-7KFTR 1 B1 6 pieces, lymphoid aggregates are ~10-20% 5.9 Small Intestine Small Intestine - Terminal Ileum 0001211 190 443 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990116 241379 0.97216 0.991736 0.80272 24683 1 76 0.00309466 270 0 8.91937e+07 0.0273545 1.32861e+06 8.99369e+07 6.5653e+06 24720 4.43818e+07 0 0.16944 0.991736 0.796086 8.91937e+07 0.00340509 1.97182e+07 9.29336e+06 2.0012e+07 257 1.99821e+07 1.25991e+07 0.00324962 1.98775e+07 49.8687 0.0147727 0.993357 0 50.3698 GTEX-16AAH-1526-SM-7LT9W 1 B1 2 pieces, fascia is ~10% tissue 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 202 431 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991482 149343 0.977514 0.993645 0.860121 21350 1 76 0.00260196 116 0 5.24775e+07 0.0221838 621409 5.28131e+07 5.38197e+06 21360 2.61093e+07 0 0.117393 0.993645 0.854654 5.24775e+07 0.0038713 1.15899e+07 5.01132e+06 1.16154e+07 130 1.16635e+07 9.20741e+06 0.00323525 1.1645e+07 49.9604 0.0117662 0.995807 0 50.0549 GTEX-16AAH-1626-SM-7EWE2 1 B1 2 pieces, spermatogenesis is present & appears normal 6.4 Testis Testis 0000473 179 454 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.9909 171180 0.92194 0.992622 0.708528 32345 1 76 0.00245278 133 0 6.81045e+07 0.0777646 1.16503e+06 6.86108e+07 6.16545e+06 32401 3.39251e+07 0 0.213413 0.992622 0.7033 6.81045e+07 0.00339506 1.40597e+07 1.03369e+07 1.4122e+07 138 1.41688e+07 9.99423e+06 0.0029231 1.41119e+07 49.8994 0.0169803 0.994344 0 50.1105 GTEX-16AAH-1726-SM-7939C 0 B1 6 pieces, minmal dermal fat, squamous epithelium is ~50-60microns 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 248 385 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.99334 277930 0.972488 0.994359 0.81437 22840 1 76 0.00216778 178 0 6.13743e+07 0.0272078 333699 6.17225e+07 4.24295e+06 22860 3.05558e+07 0 0.158117 0.994359 0.809776 6.13743e+07 0.00281832 1.34288e+07 5.74994e+06 1.34168e+07 149 1.34882e+07 1.14631e+07 0.00249272 1.34175e+07 49.8686 0.00540644 0.995377 0 49.9777 GTEX-16AAH-1826-SM-7939D 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 252 381 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994943 306856 0.983041 0.995347 0.884117 18493 1 76 0.001738 137 0 5.07568e+07 0.0167131 564861 5.09941e+07 2.42138e+06 18496 2.52763e+07 0 0.0989247 0.995347 0.880003 5.07568e+07 0.00220487 1.11945e+07 5.49148e+06 1.1234e+07 138 1.12502e+07 1.00301e+07 0.00197134 1.11938e+07 49.8744 0.011077 0.995751 0 50.088 GTEX-16AAH-1926-SM-7LG4C 0 B1 2 pieces, sections of muscular artery with adherent nubbins of connective tissue, ~1-2mm (delineated). Switched with -2125 8.2 Blood Vessel Artery - Tibial 0007610 255 378 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980925 260329 0.976773 0.987067 0.846009 22483 1 76 0.00343498 215 0 9.41539e+07 0.0227517 439314 9.53876e+07 1.46088e+07 22506 4.66319e+07 0 0.130764 0.987067 0.835068 9.41539e+07 0.00505789 2.01952e+07 8.32073e+06 2.0478e+07 251 2.07214e+07 1.92855e+07 0.00424139 2.04923e+07 49.7221 0.00460557 0.993209 0 50.3477 GTEX-16AAH-2026-SM-7LG5F 0 B1 2 pieces, ~incidental peripheral nerve embedded, delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 259 374 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.975324 468164 0.974081 0.983073 0.798287 24067 1 76 0.0035458 210 0 8.90474e+07 0.0256284 846425 9.05807e+07 1.32733e+07 24098 4.39945e+07 0 0.175794 0.983073 0.784774 8.90474e+07 0.00581896 1.92752e+07 9.75951e+06 1.94991e+07 219 1.98304e+07 1.45893e+07 0.00467342 1.95904e+07 49.6957 0.00934443 0.990821 0 50.2888 GTEX-16AAH-2126-SM-7LG4D 0 B1 2 pieces, perihperal nerve, only trace adherent fat. Switched with -1925 6.8 Nerve Nerve - Tibial 0001323 259 374 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.982922 261177 0.966337 0.988607 0.733592 25246 1 76 0.0036504 223 0 9.32859e+07 0.0333985 412102 9.43609e+07 1.40576e+07 25299 4.62188e+07 0 0.232744 0.988607 0.725234 9.32859e+07 0.00537789 2.02216e+07 9.77683e+06 2.05546e+07 224 2.07679e+07 1.41822e+07 0.00450918 2.05085e+07 49.6857 0.00436729 0.994292 0 50.4083 GTEX-16BQI-0003-SM-6RBLB B1 Blood Whole Blood 0013756 -80 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16BQI-0003-SM-6UH2O B1 Blood Whole Blood 0013756 -80 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16BQI-0006-SM-7SB6K B1 5.9 Blood Whole Blood 0013756 -81 BP-49977 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986433 840200 0.94208 0.989197 0.731672 20046 1 76 0.00292264 124 0 7.65963e+07 0.0573192 249741 7.74329e+07 8.9098e+06 20073 3.80785e+07 0 0.210408 0.989197 0.723768 7.65963e+07 0.00472664 1.65284e+07 5.54366e+07 1.67429e+07 142 1.67714e+07 1.34707e+07 0.00382212 1.67291e+07 49.937 0.00322526 0.991961 0 50.3224 GTEX-16BQI-0008-SM-EAZCC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 756 BP-49938 RNA isolation_Trizol Manual (Cell Pellet) 06/02/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993026 505700 0.982584 0.994067 0.867909 20687 1 76 0.00165248 292 0 1.17456e+08 0.0170798 219880 1.18157e+08 8.67884e+06 20704 5.85509e+07 0 0.114675 0.994067 0.86276 1.17456e+08 0.00281617 2.64329e+07 1.22363e+07 2.65267e+07 298 2.65641e+07 3.20118e+07 0.00223371 2.65118e+07 49.9507 0.00186092 0.995109 0 50.0886 GTEX-16BQI-0226-SM-7KUEX 1 B1 6 pieces; well trimmed; fragmented dermis; 3 have 20% dermal fat; 3 have 10% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 712 785 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987743 296172 0.970845 0.991467 0.788279 24905 1 76 0.00293635 312 0 9.70428e+07 0.0288853 393611 9.78779e+07 8.21258e+06 24938 4.82152e+07 0 0.182566 0.991467 0.781553 9.70428e+07 0.00358614 2.08765e+07 1.03163e+07 2.10996e+07 273 2.12678e+07 1.75283e+07 0.00326002 2.10483e+07 49.7406 0.00402145 0.995192 0 50.2657 GTEX-16BQI-0326-SM-6PAM4 1 B1 2 pieces: 10% external fat on 1 8.2 Muscle Muscle - Skeletal 0011907 713 784 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.983937 240821 0.98371 0.989782 0.890353 20105 1 76 0.0030482 280 0 1.18555e+08 0.0160196 1.07376e+06 1.19779e+08 1.44522e+07 20117 5.88404e+07 0 0.0933566 0.989782 0.881255 1.18555e+08 0.00512651 2.57804e+07 1.46109e+07 2.5842e+07 329 2.6141e+07 2.57787e+07 0.00408122 2.61437e+07 50.0027 0.00896451 0.995626 0 50.0597 GTEX-16BQI-0526-SM-6PAM8 1 B1 2 pieces; prominent artery and nerves at edge of one piece; internal holes 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 715 782 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979727 201531 0.974631 0.987482 0.804164 23861 1 76 0.00331603 216 0 9.56027e+07 0.0250111 638790 9.68146e+07 1.14364e+07 23892 4.7308e+07 0 0.170468 0.987482 0.794097 9.56027e+07 0.00585764 2.10013e+07 9.42918e+06 2.10097e+07 239 2.1333e+07 1.63054e+07 0.00457686 2.13974e+07 50.0754 0.00659808 0.995237 0 50.01 GTEX-16BQI-0626-SM-6PAMS 1 B1 2 pieces; 50% & 40% external fat 6.5 Nerve Nerve - Tibial 0001323 715 782 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.980777 200403 0.964171 0.987947 0.746759 24907 1 76 0.00328094 221 0 9.69103e+07 0.0355814 440543 9.80926e+07 1.08403e+07 24961 4.79689e+07 0 0.217412 0.987947 0.737759 9.69103e+07 0.00558049 2.11634e+07 9.48708e+06 2.10878e+07 236 2.13498e+07 1.42565e+07 0.00442237 2.15776e+07 50.2653 0.00449109 0.995118 0 49.9105 GTEX-16BQI-0726-SM-6LPJZ 2 B1 2 pieces 7.6 Thyroid Thyroid 0002046 776 721 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860,LCSET-6156 09/18/2014 TruSeq.v1 RNASEQ 0.990002 230967 0.970104 0.993156 0.758998 25013 1 76 0.0022936 277 0 1.04197e+08 0.0295782 276202 1.04915e+08 9.28092e+06 25060 5.18255e+07 0 0.211106 0.993156 0.753803 1.04197e+08 0.00320231 2.29434e+07 1.03055e+07 2.29455e+07 268 2.29914e+07 1.79342e+07 0.00274651 2.32078e+07 50.2342 0.00263263 0.996309 0 50.0022 GTEX-16BQI-0926-SM-6M485 1 B1 2 pieces 7.8 Heart Heart - Left Ventricle 0006566 784 713 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.995071 103641 0.981766 0.996419 0.857194 20397 1 76 0.00229372 152 0 6.97388e+07 0.018024 1.33591e+06 6.99894e+07 9.89062e+06 20411 3.47828e+07 0 0.124572 0.996419 0.854125 6.97388e+07 0.00316474 1.54104e+07 9.31971e+06 1.54593e+07 197 1.54219e+07 1.09053e+07 0.00272864 1.5527e+07 50.1699 0.0190873 0.997767 0 50.0791 GTEX-16BQI-1026-SM-7KUEA 1 B1 2 pieces; 90% fat with scattered atrophic ducts, no lobules 6.5 Breast Breast - Mammary Tissue 0008367 790 707 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.982785 304230 0.974543 0.988647 0.820981 24085 1 76 0.00327809 208 0 8.61044e+07 0.0250188 674909 8.70931e+07 8.14009e+06 24106 4.26547e+07 0 0.153562 0.988647 0.811661 8.61044e+07 0.0034292 1.87323e+07 9.05786e+06 1.89841e+07 248 1.91862e+07 1.44154e+07 0.00335319 1.90016e+07 49.7583 0.00774928 0.994509 0 50.3338 GTEX-16BQI-1126-SM-7KULF 1 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 792 705 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991505 293833 0.976725 0.993224 0.832638 22774 1 76 0.00338393 275 0 8.7579e+07 0.0230429 854857 8.81766e+07 6.45419e+06 22795 4.35984e+07 0 0.144087 0.993224 0.826996 8.7579e+07 0.00420843 1.9168e+07 1.02036e+07 1.94247e+07 265 1.94262e+07 1.31516e+07 0.00379547 1.93058e+07 49.8445 0.00969483 0.994942 0 50.3325 GTEX-16BQI-1326-SM-6M486 2 B1 6 pieces; up to 30% dermal fat, heavily fragmented 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 809 688 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993547 89778 0.973445 0.99498 0.808162 22125 1 76 0.00240169 140 0 5.80044e+07 0.0263339 232811 5.8297e+07 6.82409e+06 22145 2.89126e+07 0 0.165283 0.99498 0.804105 5.80044e+07 0.00342579 1.27979e+07 5.41979e+06 1.27946e+07 145 1.27597e+07 9.51608e+06 0.002913 1.29145e+07 50.3015 0.00399353 0.996412 0 49.9934 GTEX-16BQI-1526-SM-6LLIE 1 B1 6 pieces; well dissected; prominent submucosal glands 9.6 Esophagus Esophagus - Mucosa 0006920 825 672 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979927 256202 0.977287 0.987866 0.834258 22834 1 76 0.00241129 217 0 9.2887e+07 0.0223317 322231 9.40279e+07 7.89310e+06 22857 4.59848e+07 0 0.143028 0.987866 0.824136 9.2887e+07 0.0038356 2.08553e+07 1.2659e+07 2.08708e+07 247 2.11881e+07 1.98166e+07 0.00311772 2.12759e+07 50.1034 0.00342697 0.995805 0 50.0185 GTEX-16BQI-1626-SM-7KULR 1 B1 6 pieces; well dissected muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 829 668 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990951 377665 0.97606 0.993228 0.829099 23221 1 76 0.00326056 282 0 9.5449e+07 0.0236397 684925 9.60998e+07 7.06522e+06 23243 4.74913e+07 0 0.146961 0.993228 0.823485 9.5449e+07 0.00462822 2.04445e+07 8.32682e+06 2.06288e+07 266 2.06812e+07 1.66428e+07 0.00394282 2.05933e+07 49.8935 0.00712723 0.995505 0 50.2244 GTEX-16BQI-2026-SM-7KULQ 1 B1 6 pieces; varying amounts of submucosal fat 6.9 Colon Colon - Sigmoid 0001159 849 648 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990544 796791 0.962019 0.992556 0.795166 24513 1 76 0.00353731 375 0 1.2388e+08 0.0377606 1.07156e+06 1.24809e+08 9.76371e+06 24550 6.16205e+07 0 0.166852 0.992556 0.789247 1.2388e+08 0.00442008 2.63766e+07 2.56825e+07 2.67751e+07 357 2.68792e+07 1.78504e+07 0.0039778 2.6513e+07 49.6571 0.0085856 0.994567 0 50.3749 GTEX-16BQI-5007-SM-AN44E B1 Heart Heart - Left Ventricle 0006566 784 ChIP-Seq GTEX-16GPK-0003-SM-6RBLF C1 Blood Whole Blood 0013756 555 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16GPK-0003-SM-6UH2S C1 Blood Whole Blood 0013756 555 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6032 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16GPK-0008-SM-EAZ39 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 654 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.99334 769429 0.97572 0.994111 0.841938 22775 1 76 0.00179968 390 0 1.30026e+08 0.0239096 798196 1.30797e+08 1.03628e+07 22812 6.48251e+07 0 0.133782 0.994111 0.83698 1.30026e+08 0.00239422 2.89822e+07 1.55823e+07 2.91699e+07 335 2.91757e+07 3.21071e+07 0.00209672 2.90813e+07 49.9189 0.00610258 0.994882 0 50.1614 GTEX-16GPK-0011-R10a-SM-AHZMF C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 570 ChIP-Seq GTEX-16GPK-0011-R10b-SM-7MKFG C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 570 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.988172 823382 0.953661 0.991946 0.816862 23761 1 76 0.00397477 266 0 9.13574e+07 0.0461176 7.55345e+06 9.20992e+07 1.33381e+07 23776 4.53692e+07 0 0.136799 0.991946 0.810283 9.13574e+07 0.00453316 1.97486e+07 3.94508e+07 1.96552e+07 295 1.96588e+07 6.61545e+06 0.0042529 2.00258e+07 50.4624 0.0820143 0.99572 0 49.8816 GTEX-16GPK-0011-R10b-SM-CYKU7 C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 570 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 RIP-Seq GTEX-16GPK-0011-R11b-SM-7MKFF C1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 570 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982166 566461 0.947379 0.988314 0.772918 23689 1 76 0.00430558 198 0 7.77632e+07 0.0523149 2.11963e+06 7.86827e+07 1.23858e+07 23708 3.85029e+07 0 0.174461 0.988314 0.763885 7.77632e+07 0.00491727 1.6636e+07 1.71512e+07 1.6859e+07 222 1.70613e+07 8.45072e+06 0.00460952 1.68622e+07 49.7067 0.0269389 0.994461 0 50.3328 GTEX-16GPK-0011-R1b-SM-7EWDH C1, A1 6.3 Brain Brain - Hippocampus 0001954 570 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992047 298994 0.957264 0.994006 0.805837 22149 1 76 0.00228438 160 0 5.96331e+07 0.0425141 4.29168e+06 5.99927e+07 4.9623e+06 22165 2.96865e+07 0 0.151428 0.994006 0.801007 5.96331e+07 0.0034905 1.30116e+07 1.34186e+07 1.32674e+07 177 1.31465e+07 5.69093e+06 0.00288625 1.32322e+07 50.1624 0.0715367 0.995965 0 50.4867 GTEX-16GPK-0011-R8a-SM-79OMQ C1, A1 6.7 Brain Brain - Hypothalamus 0001898 570 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993653 293738 0.96004 0.993699 0.823786 23236 1 76 0.00300671 129 0 5.7543e+07 0.0397197 3.82145e+06 5.79079e+07 3.32725e+06 23255 2.86605e+07 0 0.136254 0.993699 0.818595 5.7543e+07 0.00421311 1.26143e+07 1.1087e+07 1.28277e+07 164 1.27364e+07 5.59225e+06 0.00360988 1.27037e+07 49.9358 0.0659919 0.993744 0 50.4192 GTEX-16GPK-0126-SM-7DHLE 1 C1 6 pieces; 5% internal (periadnexal) fat; epidermis ~31 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 653 543 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989786 172953 0.974007 0.990966 0.805522 23028 1 76 0.00363366 191 0 7.47296e+07 0.025705 333527 7.54109e+07 5.9007e+06 23053 3.71747e+07 0 0.168485 0.990966 0.798245 7.47296e+07 0.00560806 1.62368e+07 8.28731e+06 1.63241e+07 169 1.6361e+07 1.28005e+07 0.00461968 1.62824e+07 49.8796 0.0044228 0.992146 0 50.134 GTEX-16GPK-0226-SM-7DUFI 0 C1 2 pieces; one piece contains ~5% fibrous tissue and vessels 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 656 541 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991635 328728 0.9717 0.992283 0.774736 23962 1 76 0.00290195 201 0 8.32058e+07 0.0280075 493650 8.38529e+07 7.6146e+06 23997 4.14125e+07 0 0.196964 0.992283 0.768757 8.32058e+07 0.00426065 1.83057e+07 8.05573e+06 1.84561e+07 203 1.85472e+07 1.21823e+07 0.00358086 1.82669e+07 49.6193 0.0058871 0.99293 0 50.2045 GTEX-16GPK-0326-SM-793BT 1 C1 2 pieces; up to 1mm of external fat 7.6 Nerve Nerve - Tibial 0001323 658 539 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992559 409801 0.967203 0.993878 0.7547 24834 1 76 0.00309021 212 0 9.25424e+07 0.0324724 292693 9.31124e+07 1.3386e+07 24884 4.6075e+07 0 0.212503 0.993878 0.75008 9.25424e+07 0.00375298 2.0411e+07 9.19307e+06 2.03935e+07 212 2.04728e+07 1.50345e+07 0.00342116 2.04489e+07 49.9709 0.00314344 0.995197 0 49.9786 GTEX-16GPK-0426-SM-6PAMW 0 C1 2 pieces; atheroslerosis and medial calcification 6.7 Blood Vessel Artery - Tibial 0007610 658 540 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979887 216826 0.970116 0.987374 0.800205 24124 1 76 0.00335646 277 0 1.08181e+08 0.0295563 457468 1.09564e+08 1.24962e+07 24159 5.35116e+07 0 0.169911 0.987374 0.790102 1.08181e+08 0.00582126 2.31908e+07 9.25689e+06 2.31562e+07 320 2.34612e+07 1.82145e+07 0.00457951 2.36481e+07 50.1983 0.00417535 0.994862 0 49.9626 GTEX-16GPK-0526-SM-7KUER 0 C1 2 pieces; ~10% internal/external fat 7.3 Muscle Muscle - Skeletal 0011907 661 537 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.985716 311913 0.983329 0.991149 0.880106 19517 1 76 0.00265758 124 0 7.11523e+07 0.0164125 853249 7.17877e+07 6.03724e+06 19523 3.52934e+07 0 0.103222 0.991149 0.872316 7.11523e+07 0.00321289 1.53547e+07 6.6065e+06 1.5437e+07 161 1.56005e+07 1.52698e+07 0.00293371 1.5538e+07 49.8996 0.0118857 0.996582 0 50.1336 GTEX-16GPK-0526-SM-CYKU9-ELUATE 0 C1 2 pieces; ~10% internal/external fat 7.3 Muscle Muscle - Skeletal 0011907 661 537 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16GPK-0526-SM-CYKU9-INPUT 0 C1 2 pieces; ~10% internal/external fat 7.3 Muscle Muscle - Skeletal 0011907 661 537 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16GPK-0526-SM-CYKU9-SUP 0 C1 2 pieces; ~10% internal/external fat 7.3 Muscle Muscle - Skeletal 0011907 661 537 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16GPK-0626-SM-7KFSF 1 C1 6 pieces; hair bearing skin with ~10 to 20% internal/external fat 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 663 536 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.98993 235408 0.969665 0.99238 0.771338 25297 1 76 0.00295488 165 0 7.86136e+07 0.0300907 315713 7.92173e+07 6.11696e+06 25328 3.90852e+07 0 0.198327 0.99238 0.765461 7.86136e+07 0.0030763 1.72506e+07 9.1903e+06 1.75179e+07 180 1.75518e+07 1.29806e+07 0.00301544 1.74043e+07 49.7889 0.00398541 0.994831 0 50.3844 GTEX-16GPK-0926-SM-6LPJ9 2 C1 2 pieces; mild interstitial fibrosis 7.2 Thyroid Thyroid 0002046 676 595 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990612 168447 0.968969 0.993001 0.775504 22908 1 76 0.00265601 119 0 5.79927e+07 0.0307463 226110 5.84015e+07 9.0694e+06 22934 2.88703e+07 0 0.193465 0.993001 0.770076 5.79927e+07 0.00372179 1.27709e+07 6.48549e+06 1.27528e+07 127 1.27678e+07 9.82547e+06 0.00318762 1.28872e+07 50.2326 0.00387165 0.99539 0 49.9647 GTEX-16GPK-1126-SM-CYKSS 1 C1 2 pieces; accentuation of interstitial connective tissue, patchy hypereosinophilia and fragmented fibers (?early ischemic change) 5.8 Heart Heart - Left Ventricle 0006566 682 590 BP-51629 RNA Extraction from Paxgene-derived Lysate Plate Based 04/16/2014 RIP-Seq GTEX-16GPK-1226-SM-7KUE6 1 C1 2 pieces 6.8 Heart Heart - Atrial Appendage 0006631 682 591 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.989583 346376 0.974728 0.992223 0.785965 23793 1 76 0.00311759 200 0 8.73926e+07 0.0249892 2.86707e+06 8.80777e+07 7.51634e+06 23822 4.34355e+07 0 0.188763 0.992223 0.779852 8.73926e+07 0.0033173 1.91168e+07 9.04545e+06 1.92527e+07 251 1.93584e+07 1.24052e+07 0.00321718 1.92226e+07 49.824 0.0325517 0.994862 0 50.1771 GTEX-16GPK-1226-SM-7LTAU 1 C1 2 pieces 6.8 Heart Heart - Atrial Appendage 0006631 682 591 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987703 354453 0.974996 0.990774 0.785599 24250 1 76 0.00269715 270 0 9.99245e+07 0.02471 3.41896e+06 1.00855e+08 1.15416e+07 24291 4.96051e+07 0 0.189397 0.990774 0.778351 9.99245e+07 0.00409003 2.18713e+07 1.0889e+07 2.19279e+07 298 2.2097e+07 1.41982e+07 0.00339143 2.1978e+07 49.865 0.0338998 0.993844 0 50.0647 GTEX-16GPK-1326-SM-7KUE4 0 C1 2 pieces; mature adipose tissue 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 683 590 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988199 439074 0.972005 0.991581 0.79954 25210 1 76 0.003186 285 0 1.17579e+08 0.0276512 644854 1.18577e+08 1.03882e+07 25244 5.83968e+07 0 0.172465 0.991581 0.792809 1.17579e+08 0.00362235 2.56567e+07 1.54841e+07 2.60086e+07 318 2.6163e+07 1.97157e+07 0.00340343 2.58883e+07 49.7361 0.00543825 0.994963 0 50.3406 GTEX-16GPK-1426-SM-6M47Y 1 C1 6 pieces; target muscularis with single tiny attachment of submucosal gland and lymphocytic infiltrate (outlined) 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 684 590 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993347 114902 0.972078 0.994943 0.822224 21858 1 76 0.00247707 149 0 6.25722e+07 0.0277565 1.73091e+06 6.28902e+07 8.25066e+06 21877 3.11815e+07 0 0.149854 0.994943 0.818066 6.25722e+07 0.0035924 1.38084e+07 6.06651e+06 1.37954e+07 178 1.37595e+07 6.82553e+06 0.00303384 1.39375e+07 50.3213 0.0275226 0.996539 0 49.9765 GTEX-16GPK-1826-SM-7MGW5 1 C1 2 pieces; marked congestion with focal areas of collapsed alveoli (arrowed); bronchial lumen filled with mucus, desquamated epithelial lining cells, microorganisms (outlined) and vegetable matter 5.6 Lung Lung 0008952 692 584 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.984347 32774 0.975079 0.986842 0.822442 19031 1 76 0.00284379 107 0 1.96858e+07 0.0246248 173650 1.99483e+07 1.6361e+06 19035 9.79403e+06 0 0.152637 0.986842 0.81162 1.96858e+07 0.00381174 4.34046e+06 2.16827e+06 4.38212e+06 111 4.38293e+06 3.34372e+06 0.00332654 4.38668e+06 50.0214 0.00870502 0.989336 0 50.2388 GTEX-16GPK-2826-SM-6LPJ6 2 C1 6 pieces; prostate, not pituitary, fibromuscular stroma and glands with sloughed epithelium 6.1 Prostate Prostate 0002367 711 571 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.989761 140219 0.966968 0.992196 0.784484 23800 1 76 0.00273966 131 0 6.20549e+07 0.0328588 1.19901e+06 6.2543e+07 9.25788e+06 23821 3.08833e+07 0 0.182484 0.992196 0.778362 6.20549e+07 0.00380039 1.37734e+07 7.25381e+06 1.36672e+07 159 1.36344e+07 7.19065e+06 0.00326872 1.39521e+07 50.5759 0.019171 0.99463 0 49.8064 GTEX-16GPK-3026-SM-79ON9 2 C1 4 pieces; small fragment of meninges (outlined) 6.5 Brain Brain - Cortex 0001870 717 566 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.992396 600141 0.957099 0.993132 0.82673 23426 1 76 0.00279908 265 0 8.634e+07 0.0426074 5.79251e+06 8.69371e+07 6.65241e+06 23445 4.3023e+07 0 0.130369 0.993132 0.821052 8.634e+07 0.00373621 1.86599e+07 2.88161e+07 1.91632e+07 328 1.89872e+07 7.55752e+06 0.00326729 1.88898e+07 49.8715 0.0666288 0.993869 0 50.6653 GTEX-16GPK-3126-SM-79OOB 2 C1 1 piece; adenohypophysis and neurohypophysis (outlined); dura (arrow) with meningeal rest and psammoma bodies 6.7 Pituitary Pituitary 0000007 718 566 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99269 287872 0.957764 0.992862 0.71822 24886 1 76 0.00326403 122 0 6.46056e+07 0.0420438 403212 6.507e+07 3.77154e+06 24924 3.21605e+07 0 0.239544 0.992862 0.713094 6.46056e+07 0.00454593 1.3623e+07 6.49177e+06 1.36939e+07 141 1.37365e+07 8.12361e+06 0.00390487 1.3591e+07 49.7337 0.00619659 0.993035 0 50.1297 GTEX-16MT8-0002-SM-6RBLH C1 Blood Whole Blood 0013756 403 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16MT8-0002-SM-6UH2U C1 Blood Whole Blood 0013756 403 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6235,LCSET-6345 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16MT8-0005-SM-7PBYO C1 7.3 Blood Whole Blood 0013756 403 BP-50067 RNA isolation_PAXgene Blood RNA (Manual) 03/03/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.937188 452462 0.979061 0.940926 0.805861 16229 1 76 0.0028112 103 0 1.0319e+08 0.018941 107058 1.09669e+08 1.59509e+07 16230 5.1225e+07 0 0.1732 0.940926 0.758256 1.0319e+08 0.00527218 2.46799e+07 2.25703e+08 2.4647e+07 155 2.47044e+07 2.94357e+07 0.0040368 2.50453e+07 50.3426 0.000976192 0.944664 0 49.9667 GTEX-16MT8-0008-SM-EAZC3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 447 BP-50069 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993436 451545 0.982289 0.994369 0.866484 20923 1 76 0.00170288 289 0 1.07739e+08 0.0173895 259084 1.08349e+08 8.09884e+06 20946 5.37137e+07 0 0.115805 0.994369 0.861605 1.07739e+08 0.002684 2.43314e+07 1.13402e+07 2.44274e+07 278 2.44491e+07 2.90748e+07 0.00219298 2.44096e+07 49.9597 0.0023912 0.995301 0 50.0984 GTEX-16MT8-0126-SM-7DHLD 0 C1 2 pieces, prominent Monckeberg medial sclerosis, delineated. Minimal atherosis/adherent fat 8.1 Blood Vessel Artery - Tibial 0007610 439 1226 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988847 148190 0.970786 0.989685 0.807957 22026 1 76 0.00355188 153 0 7.43962e+07 0.0288682 263729 7.51716e+07 6.24003e+06 22049 3.69695e+07 0 0.162829 0.989685 0.799623 7.43962e+07 0.0054713 1.60518e+07 5.8293e+06 1.61618e+07 165 1.61719e+07 1.35505e+07 0.00451078 1.61025e+07 49.8925 0.00350836 0.990523 0 50.1707 GTEX-16MT8-0326-SM-6PAM5 0 C1 2 pieces, ~10% interstitial fat, rep delineated 7.2 Muscle Muscle - Skeletal 0011907 445 1221 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.985523 170613 0.981748 0.991003 0.852771 21873 1 76 0.00314197 283 0 1.19397e+08 0.017992 1.02874e+06 1.20481e+08 1.36386e+07 21900 5.92732e+07 0 0.128976 0.991003 0.845099 1.19397e+08 0.00500617 2.60574e+07 1.30644e+07 2.62058e+07 329 2.63885e+07 2.49303e+07 0.00406891 2.64981e+07 50.1036 0.00853861 0.996482 0 50.1419 GTEX-16MT8-0426-SM-7KUEY 0 C1 6 pieces, trace adherent fat, squamous epithelium is ~30-40 microns 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 447 1220 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986274 274106 0.971981 0.990491 0.797045 24158 1 76 0.00327014 180 0 8.05089e+07 0.0278069 703236 8.12818e+07 7.77039e+06 24189 3.99529e+07 0 0.174936 0.990491 0.789466 8.05089e+07 0.00348146 1.75447e+07 8.58571e+06 1.77638e+07 191 1.78847e+07 1.34403e+07 0.00337535 1.77486e+07 49.809 0.00865182 0.994708 0 50.3103 GTEX-16MT8-0526-SM-6PAM6 0 C1 2 pieces, <10% fascia/vascular elements, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 448 1219 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.979223 219182 0.972267 0.986842 0.785664 24740 1 76 0.00341073 277 0 1.06893e+08 0.0273801 850971 1.08319e+08 1.29455e+07 24776 5.28929e+07 0 0.186603 0.986842 0.775327 1.06893e+08 0.00591535 2.33512e+07 1.19457e+07 2.33562e+07 298 2.36863e+07 1.71056e+07 0.00465337 2.38113e+07 50.1317 0.00785619 0.994461 0 50.0054 GTEX-16MT8-0626-SM-6M47Q 1 C1 2 pieces, mild regressive changes 6.1 Thyroid Thyroid 0002046 462 1206 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992359 142559 0.962514 0.993865 0.701622 24557 1 76 0.00290356 130 0 6.90877e+07 0.0366927 254660 6.95142e+07 9.72753e+06 24601 3.43948e+07 0 0.260891 0.993865 0.697318 6.90877e+07 0.00380901 1.51322e+07 8.68597e+06 1.51489e+07 145 1.51538e+07 9.1659e+06 0.0033556 1.52268e+07 50.1202 0.00366343 0.995371 0 50.0276 GTEX-16MT8-0826-SM-7KULO 1 C1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 468 1201 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991047 469783 0.977609 0.993248 0.807234 22425 1 76 0.0032788 200 0 8.76265e+07 0.0221656 2.24331e+06 8.82222e+07 6.037e+06 22452 4.35974e+07 0 0.170375 0.993248 0.801784 8.76265e+07 0.00464031 1.8509e+07 1.11111e+07 1.86826e+07 214 1.87756e+07 1.41378e+07 0.00395805 1.85847e+07 49.7446 0.025428 0.995449 0 50.2334 GTEX-16MT8-0926-SM-6M487 1 C1 2 pieces, moderate-marked interstitial fibrosis/chronic ischemic damage 6.1 Heart Heart - Left Ventricle 0006566 470 1199 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994726 67549 0.987193 0.996274 0.855967 18819 1 76 0.00284384 262 0 6.85835e+07 0.012761 3.86825e+06 6.88401e+07 9.72782e+06 18826 3.42108e+07 0 0.131227 0.996274 0.852777 6.85835e+07 0.00399306 1.53723e+07 2.47815e+07 1.51428e+07 270 1.51278e+07 3.27458e+06 0.00341755 1.54734e+07 50.5648 0.0561919 0.997821 0 49.6239 GTEX-16MT8-1026-SM-6LPK1 1 C1 2 pieces, moderate congestion/atalectasis 7.3 Lung Lung 0008952 471 1198 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990031 108362 0.971714 0.992271 0.765868 23570 1 76 0.00286531 125 0 5.92071e+07 0.0277836 199027 5.96683e+07 8.93066e+06 23591 2.94571e+07 0 0.205846 0.992271 0.759948 5.92071e+07 0.00382323 1.30982e+07 6.12192e+06 1.30523e+07 131 1.30366e+07 9.67211e+06 0.00334319 1.3239e+07 50.3852 0.00333556 0.994511 0 49.9123 GTEX-16MT8-1226-SM-6M488 1 C1 6 pieces, confirmed target muscularis 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 474 1199 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993284 90100 0.969498 0.994766 0.761053 22290 1 76 0.00261591 121 0 5.93901e+07 0.0302907 415975 5.97026e+07 8.22829e+06 22309 2.95904e+07 0 0.208446 0.994766 0.757069 5.93901e+07 0.00353681 1.28267e+07 5.36012e+06 1.28618e+07 133 1.28341e+07 9.0816e+06 0.00307567 1.29383e+07 50.2021 0.00696745 0.996248 0 50.0682 GTEX-16MT8-1326-SM-6M47R 1 C1 6 pieces squamous mucosa is ~0.3mm, 20-50% thickness; incidental submucosal mucus glands present, rep delineated 7.1 Esophagus Esophagus - Mucosa 0006920 474 1199 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.99387 119946 0.9693 0.995242 0.746922 22989 1 76 0.00253449 124 0 6.05649e+07 0.0304769 349126 6.08544e+07 7.95259e+06 23016 3.01894e+07 0 0.222378 0.995242 0.743368 6.05649e+07 0.00350666 1.35409e+07 7.57243e+06 1.35255e+07 131 1.35204e+07 9.7903e+06 0.0030199 1.36296e+07 50.201 0.00573707 0.996614 0 49.9715 GTEX-16MT8-1626-SM-7EWDW 1 C1 2 pieces, all cortex, well preserved, minimal fat 6.4 Adrenal Gland Adrenal Gland 0002369 479 1195 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.989513 467641 0.972048 0.992051 0.785295 24210 1 76 0.00275339 374 0 1.39747e+08 0.0276312 2.74324e+06 1.40867e+08 1.62048e+07 24248 6.94731e+07 0 0.186754 0.992051 0.779052 1.39747e+08 0.00453806 3.00346e+07 2.39695e+07 3.05278e+07 400 3.06389e+07 1.95904e+07 0.00364344 3.02604e+07 49.6893 0.0194741 0.994589 0 50.4072 GTEX-16MT8-1726-SM-7EWE7 1 C1 2 pieces, numerous well-preserved Islets, rep delineated. Minimal adherent fat (~10%) 6.5 Pancreas Pancreas 0001150 482 1192 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6444,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.989155 230519 0.963965 0.991331 0.715733 25185 1 76 0.00273443 193 0 1.16752e+08 0.0358149 519769 1.17773e+08 1.39289e+07 25237 5.80385e+07 0 0.248232 0.991331 0.709529 1.16752e+08 0.00417779 2.59176e+07 2.01354e+07 2.61295e+07 205 2.62207e+07 2.2476e+07 0.00345453 2.60826e+07 49.868 0.00441333 0.993507 0 50.2036 GTEX-16MT8-1826-SM-7EWE8 1 C1 2 pieces, spleen, depleted -appearing red pulp 6.3 Spleen Spleen 0002106 484 1190 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989341 219128 0.96657 0.991495 0.723663 22549 1 76 0.00290114 118 0 6.00273e+07 0.0328179 351082 6.05422e+07 5.35243e+06 22581 2.98366e+07 0 0.242907 0.991495 0.717509 6.00273e+07 0.00421109 1.32525e+07 1.12438e+07 1.33283e+07 128 1.33696e+07 8.84568e+06 0.00355469 1.33372e+07 49.9394 0.00579896 0.993649 0 50.1425 GTEX-16MT8-1926-SM-7EPGL 1 C1 6 pieces, glomeruli present; tubules well preserved 6.8 Kidney Kidney - Cortex 0001225 485 1189 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991069 231884 0.972279 0.993392 0.810432 24431 1 76 0.00329481 153 0 9.60954e+07 0.0274936 2.24657e+06 9.67347e+07 1.2398e+07 24459 4.78713e+07 0 0.161847 0.993392 0.805076 9.60954e+07 0.0116523 2.11929e+07 1.69849e+07 2.15599e+07 182 2.15851e+07 1.19014e+07 0.00746379 2.13685e+07 49.7478 0.023224 0.995715 0 50.4291 GTEX-16MT8-2226-SM-6LPK2 1 C1 2 pieces, typical post menopausal atrophy, no abnormalities 7 Ovary Ovary 0000992 489 1186 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990557 180961 0.968373 0.992785 0.772325 22495 1 76 0.00256909 146 0 6.66234e+07 0.0314027 146067 6.71076e+07 1.02887e+07 22519 3.31651e+07 0 0.196048 0.992785 0.766752 6.66234e+07 0.0034599 1.45709e+07 1.26247e+07 1.45399e+07 140 1.45092e+07 1.37901e+07 0.0030135 1.47487e+07 50.4092 0.00217661 0.995013 0 49.9467 GTEX-16MT8-2726-SM-7IGLJ 3 C1 6 pieces, mucosa largely sloughed, advanced autolysis 6.1 Colon Colon - Transverse 0001157 495 1181 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994101 231728 0.972594 0.994832 0.803231 24934 1 76 0.00223976 275 0 9.56275e+07 0.0266668 1.50098e+06 9.61242e+07 5.85889e+06 24964 4.76418e+07 0 0.169364 0.994832 0.79908 9.56275e+07 0.00300261 2.0962e+07 1.16779e+07 2.12203e+07 313 2.11878e+07 1.39059e+07 0.00262091 2.10639e+07 49.8534 0.015615 0.995563 0 50.3061 GTEX-16MT8-2926-SM-7DUFO 0 C1 6 pieces, squamous epithelium is ~30 microns, minimal adherent dermal fat. 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 499 1177 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991131 401220 0.971703 0.99213 0.753782 24932 1 76 0.00293778 222 0 9.72207e+07 0.028056 563236 9.79919e+07 8.62462e+06 24980 4.83986e+07 0 0.21792 0.99213 0.74785 9.72207e+07 0.00444466 2.14453e+07 1.26527e+07 2.16559e+07 234 2.17151e+07 1.492e+07 0.00369046 2.14791e+07 49.7268 0.00574778 0.993129 0 50.2442 GTEX-16MT9-0004-SM-6RBLG C1 Blood Whole Blood 0013756 471 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16MT9-0004-SM-6UH2T C1 Blood Whole Blood 0013756 471 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16MT9-0006-SM-7MXTU C1 7 Blood Whole Blood 0013756 471 BP-50067 RNA isolation_PAXgene Blood RNA (Manual) 03/03/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.965537 192436 0.979823 0.975552 0.812137 19239 1 76 0.00334951 115 0 6.85582e+07 0.0196074 289926 7.02763e+07 1.16941e+07 19253 3.38549e+07 0 0.167685 0.975552 0.792282 6.85582e+07 0.00507351 1.56568e+07 7.18462e+07 1.57617e+07 125 1.60654e+07 1.60491e+07 0.00420266 1.60437e+07 49.9662 0.00412551 0.985567 0 50.167 GTEX-16MT9-0008-SM-EAZC8 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 588 BP-50058 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992425 581839 0.976479 0.993366 0.851146 21595 1 76 0.0017615 295 0 1.02405e+08 0.023129 268664 1.03089e+08 8.07808e+06 21620 5.10411e+07 0 0.125333 0.993366 0.8455 1.02405e+08 0.00261393 2.28587e+07 1.28269e+07 2.29471e+07 277 2.29526e+07 2.5269e+07 0.00218731 2.29493e+07 49.9963 0.00260614 0.994308 0 50.0965 GTEX-16MT9-0126-SM-7EPI8 1 C1 6 pieces; well trimmed 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 477 549 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989788 196146 0.973624 0.992216 0.717951 24110 1 76 0.0032489 127 0 8.6343e+07 0.0261726 340748 8.70204e+07 1.15234e+07 24151 4.29921e+07 0 0.255674 0.992216 0.712362 8.6343e+07 0.0116982 1.90368e+07 1.04743e+07 1.92247e+07 138 1.92961e+07 1.28244e+07 0.00746321 1.9165e+07 49.8296 0.00391573 0.994644 0 50.2455 GTEX-16MT9-0226-SM-793BN 1 C1 2 pieces; ~10% external/internal fat 7.6 Nerve Nerve - Tibial 0001323 582 444 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993363 327686 0.973695 0.994502 0.770445 23787 1 76 0.00301994 188 0 8.84656e+07 0.0259543 247461 8.89547e+07 1.19506e+07 23819 4.40674e+07 0 0.203249 0.994502 0.76621 8.84656e+07 0.00353041 1.95965e+07 8.40795e+06 1.9558e+07 198 1.96031e+07 1.5692e+07 0.00327488 1.96503e+07 50.0602 0.00278188 0.995641 0 49.9508 GTEX-16MT9-1726-SM-6M47P 2 C1 2 pieces; severe congestion 5.8 Spleen Spleen 0002106 617 413 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.991698 128416 0.955246 0.993334 0.729602 23225 1 76 0.00270291 115 0 5.53761e+07 0.044562 521714 5.57477e+07 7.00276e+06 23248 2.7582e+07 0 0.225645 0.993334 0.724739 5.53761e+07 0.00380561 1.2022e+07 8.16779e+06 1.20375e+07 128 1.2017e+07 7.00728e+06 0.00325335 1.21292e+07 50.2324 0.00935849 0.99497 0 50.0323 GTEX-16MTA-0003-SM-6RBLE B1 Blood Whole Blood 0013756 -85 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16MTA-0003-SM-6UH2R B1 Blood Whole Blood 0013756 -85 BP-49989 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16MTA-0005-SM-7RHFT B1 7.3 Blood Whole Blood 0013756 -85 BP-50067 RNA isolation_PAXgene Blood RNA (Manual) 03/03/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.989237 316327 0.974862 0.991073 0.837032 18417 1 76 0.00258127 197 0 9.35839e+07 0.0243065 384338 9.44269e+07 9.196e+06 18428 4.65969e+07 0 0.13783 0.991073 0.829559 9.35839e+07 0.00396351 2.13709e+07 7.73843e+07 2.15177e+07 207 2.1546e+07 2.19462e+07 0.00327111 2.15141e+07 49.9629 0.00407022 0.992908 0 50.1711 GTEX-16MTA-0008-SM-EAZC6 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 259 BP-50059 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993468 461906 0.981842 0.994392 0.86374 20899 1 76 0.00167544 286 0 1.00126e+08 0.0178199 239246 1.0069e+08 7.4828e+06 20912 4.99188e+07 0 0.118102 0.994392 0.858896 1.00126e+08 0.002607 2.25716e+07 1.05634e+07 2.2627e+07 266 2.26503e+07 2.69909e+07 0.00214079 2.26392e+07 49.9877 0.00237605 0.995316 0 50.0612 GTEX-16MTA-0726-SM-7KUL4 0 B1 2 pieces 7.7 Thyroid Thyroid 0002046 136 1018 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990948 478864 0.971975 0.993115 0.787969 24805 1 76 0.00330859 212 0 9.47692e+07 0.0277253 348209 9.54263e+07 7.03947e+06 24836 4.71445e+07 0 0.184006 0.993115 0.782544 9.47692e+07 0.00437009 2.07804e+07 8.07378e+06 2.0894e+07 235 2.10159e+07 1.61455e+07 0.00383818 2.08523e+07 49.8046 0.00364898 0.995282 0 50.1363 GTEX-16MTA-0826-SM-6LLIC 1 B1 6 pieces; esophagitis (c/w reflux) with eosinophilic squamous surface focally 9.4 Esophagus Esophagus - Mucosa 0006920 136 1018 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.979425 225735 0.975373 0.987231 0.825114 23502 1 76 0.00231417 280 0 9.4332e+07 0.0243304 398162 9.55521e+07 8.27692e+06 23528 4.67037e+07 0 0.15026 0.987231 0.814578 9.4332e+07 0.00368192 2.10474e+07 1.34451e+07 2.11085e+07 268 2.13992e+07 1.86565e+07 0.00299264 2.1488e+07 50.1035 0.00416696 0.995036 0 50.0725 GTEX-16MTA-0926-SM-6M47Z 0 B1 6 pieces; well trimmed 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 143 1011 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992539 119105 0.970808 0.994284 0.808022 21910 1 76 0.00232047 150 0 6.11152e+07 0.0290584 687478 6.14666e+07 8.09524e+06 21928 3.04586e+07 0 0.162786 0.994284 0.803404 6.11152e+07 0.00358807 1.35254e+07 7.21096e+06 1.35769e+07 162 1.35191e+07 8.43618e+06 0.00295315 1.36889e+07 50.3121 0.0111846 0.996029 0 50.0951 GTEX-16MTA-1126-SM-6LPJA 1 B1 2 pieces; spermatogenesis is present, some hyalinized tubules 6.9 Testis Testis 0000473 151 1003 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990674 212278 0.937561 0.992857 0.734999 31538 1 76 0.00254132 135 0 6.65122e+07 0.0621395 817041 6.69907e+07 1.03607e+07 31586 3.31213e+07 0 0.202562 0.992857 0.729749 6.65122e+07 0.00346601 1.4137e+07 9.31749e+06 1.40297e+07 139 1.40602e+07 1.04404e+07 0.00300265 1.42353e+07 50.3093 0.0121963 0.99504 0 49.8096 GTEX-16MTA-1226-SM-7KULL 0 B1 2 pieces; some collapse, numerous pulmonary macrophages 5.8 Lung Lung 0008952 153 1001 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990594 615242 0.979735 0.992641 0.882755 25743 1 76 0.00346054 387 0 1.84609e+08 0.0199178 1.03429e+06 1.85978e+08 1.42604e+07 25771 9.18618e+07 0 0.0969804 0.992641 0.876259 1.84609e+08 0.00431636 4.08731e+07 2.04196e+07 4.14536e+07 409 4.14267e+07 4.03603e+07 0.00388757 4.12767e+07 49.9093 0.00556136 0.994688 0 50.3526 GTEX-16MTA-1326-SM-6PALX 0 B1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 152 1002 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977589 212762 0.980035 0.986412 0.878452 23647 1 76 0.00297253 376 0 1.04973e+08 0.0197346 1.46545e+06 1.06419e+08 1.18668e+07 23666 5.19044e+07 0 0.101583 0.986412 0.866516 1.04973e+08 0.00590075 2.30103e+07 1.14818e+07 2.3158e+07 379 2.34432e+07 1.71513e+07 0.00442354 2.36019e+07 50.1687 0.0137706 0.995235 0 50.1599 GTEX-16MTA-1426-SM-6PALY 0 B1 2 pieces; fibromuscular stroma admixed with glands 6.6 Prostate Prostate 0002367 155 999 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.981346 173029 0.976937 0.988473 0.874728 23093 1 76 0.00298559 381 0 1.07726e+08 0.0227619 736432 1.08982e+08 1.22294e+07 23112 5.33466e+07 0 0.10221 0.988473 0.864645 1.07726e+08 0.00546052 2.30759e+07 9.62852e+06 2.30718e+07 346 2.32784e+07 2.21918e+07 0.00421413 2.35902e+07 50.3326 0.00675735 0.995601 0 49.9955 GTEX-16MTA-1526-SM-6LPJB 1 B1 6 pieces; mucosa and submucosa with good lymphoid tissue in 3 of 6 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 169 985 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990781 124854 0.97272 0.993001 0.79863 22882 1 76 0.00272745 141 0 6.24349e+07 0.0264807 626207 6.28749e+07 1.01036e+07 22905 3.10724e+07 0 0.17409 0.993001 0.79304 6.24349e+07 0.00366243 1.39618e+07 7.1741e+06 1.38857e+07 142 1.3889e+07 1.0631e+07 0.0031939 1.40878e+07 50.3554 0.00995957 0.995221 0 49.8634 GTEX-16MTA-1626-SM-6M47N 0 B1 6 pieces; relatively well trimmed with some residual attached fat 7.6 Colon Colon - Sigmoid 0001159 174 980 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993814 157791 0.976682 0.995482 0.851242 20831 1 76 0.00220668 153 0 6.50067e+07 0.0230251 447545 6.53017e+07 8.53387e+06 20842 3.23989e+07 0 0.125441 0.995482 0.847395 6.50067e+07 0.00329088 1.41582e+07 5.80415e+06 1.41845e+07 161 1.41846e+07 1.16604e+07 0.00274787 1.42593e+07 50.1314 0.00685349 0.99715 0 50.0463 GTEX-16MTA-1926-SM-7KUG1 0 B1 4 pieces; mild atherosclerosis 7.6 Blood Vessel Artery - Tibial 0007610 250 904 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987259 247715 0.97832 0.99132 0.867725 20458 1 76 0.00289534 168 0 7.38504e+07 0.0212477 324829 7.44971e+07 6.72514e+06 20471 3.66637e+07 0 0.110594 0.99132 0.860193 7.38504e+07 0.00320868 1.5829e+07 5.41612e+06 1.60309e+07 176 1.61374e+07 1.54762e+07 0.00305137 1.60039e+07 49.7922 0.00436029 0.995381 0 50.3169 GTEX-16MTA-2026-SM-7KUL3 0 B1 2 pieces; central defect in 1 piece, otherwise includes minimal fat/vessels 8.3 Muscle Muscle - Skeletal 0011907 252 902 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.993211 389799 0.984654 0.99459 0.882435 19406 1 76 0.00295204 275 0 9.58487e+07 0.0151296 1.68832e+06 9.637e+07 6.26471e+06 19413 4.77529e+07 0 0.102219 0.99459 0.877661 9.58487e+07 0.00360513 2.07674e+07 1.39328e+07 2.109e+07 282 2.11336e+07 1.92733e+07 0.00327813 2.08345e+07 49.6436 0.0175192 0.995969 0 50.3854 GTEX-16MTA-2126-SM-6PALC 0 B1 2 pieces, central defects in both (?poor fixation) 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 254 900 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.982417 254097 0.976009 0.989119 0.813829 23713 1 76 0.00309319 382 0 1.1591e+08 0.0236939 551956 1.17185e+08 1.32485e+07 23748 5.7435e+07 0 0.16218 0.989119 0.804973 1.1591e+08 0.00527072 2.54843e+07 1.07108e+07 2.55202e+07 334 2.58218e+07 2.1018e+07 0.00417457 2.59386e+07 50.1128 0.00471012 0.99582 0 50.0352 GTEX-16NFA-0003-SM-6RBLD B1 Blood Whole Blood 0013756 -44 BP-50039 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/03/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16NFA-0003-SM-6UH2Q B1 Blood Whole Blood 0013756 -44 BP-50039 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/03/2014 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-16NFA-0526-SM-7KULM 1 B1 2 pieces; 1 piece has 10% fibrous content on edge and no fat; other has 50% fat 7.7 Heart Heart - Atrial Appendage 0006631 212 942 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990789 376176 0.977946 0.992925 0.824376 22398 1 76 0.00415862 199 0 9.26818e+07 0.0217991 1.58504e+06 9.33422e+07 6.60993e+06 22418 4.61223e+07 0 0.15357 0.992925 0.818543 9.26818e+07 0.00516578 1.93981e+07 1.85534e+07 1.99145e+07 243 1.98365e+07 1.44997e+07 0.00466112 1.96314e+07 49.7403 0.0169809 0.995061 0 50.6567 GTEX-16NFA-0726-SM-6LPJC 1 B1 2 pieces; scattered focal lymphocytic deposits, possible early Hashimoto thyroiditis 7.1 Thyroid Thyroid 0002046 220 934 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.989798 191020 0.963107 0.992011 0.744327 24082 1 76 0.00327908 120 0 6.68197e+07 0.0353592 144516 6.73578e+07 9.90572e+06 24120 3.32191e+07 0 0.218779 0.992011 0.738381 6.68197e+07 0.00421881 1.45881e+07 9.22015e+06 1.4557e+07 134 1.45841e+07 1.08114e+07 0.0037479 1.46976e+07 50.1938 0.0021455 0.994224 0 49.9468 GTEX-16NFA-0826-SM-6LPJD 1 B1 2 pieces; atelectatic; moderate anthracotic deposits; pigmented macrophages 7.6 Lung Lung 0008952 234 920 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.99209 125523 0.976335 0.994098 0.793917 23183 1 76 0.00302079 132 0 6.55812e+07 0.0231803 238740 6.59706e+07 1.00848e+07 23210 3.26497e+07 0 0.182418 0.994098 0.789231 6.55812e+07 0.00380149 1.45743e+07 5.70229e+06 1.45575e+07 142 1.45418e+07 1.18159e+07 0.00341035 1.47146e+07 50.2953 0.00361888 0.996105 0 49.9712 GTEX-16NFA-1026-SM-6M47O 1 B1 6 pieces; submucosal glands and ducts are prominent making up 10% 8.2 Esophagus Esophagus - Mucosa 0006920 257 897 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.993034 129492 0.972785 0.994596 0.798166 23069 1 76 0.00272741 131 0 6.27093e+07 0.0266072 250976 6.305e+07 8.6395e+06 23084 3.12465e+07 0 0.174619 0.994596 0.793853 6.27093e+07 0.00367919 1.39869e+07 7.88102e+06 1.40294e+07 133 1.40285e+07 1.2288e+07 0.00320255 1.40816e+07 50.0945 0.00398059 0.996158 0 50.076 GTEX-16NFA-1126-SM-7KUE7 0 B1 2 pieces 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 259 895 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.985669 297412 0.977238 0.990533 0.836905 22765 1 76 0.00392414 273 0 8.70482e+07 0.022519 1.04743e+06 8.78802e+07 8.23953e+06 22781 4.31754e+07 0 0.140333 0.990533 0.828981 8.70482e+07 0.00440133 1.88023e+07 1.1016e+07 1.90956e+07 268 1.9141e+07 1.14219e+07 0.00416157 1.91318e+07 49.988 0.0119188 0.995396 0 50.3869 GTEX-16NFA-1226-SM-6M481 1 B1 6 pieces; 8.3 Esophagus Esophagus - Muscularis 0004648 262 892 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.990661 97551 0.974122 0.992261 0.816592 20897 1 76 0.0027268 126 0 5.47511e+07 0.0256303 362255 5.51781e+07 7.37526e+06 20909 2.72862e+07 0 0.15753 0.992261 0.810272 5.47511e+07 0.00370504 1.17205e+07 4.95667e+06 1.17738e+07 126 1.17405e+07 9.46856e+06 0.00321513 1.18368e+07 50.2041 0.00656519 0.99386 0 50.1135 GTEX-16NFA-1326-SM-6M47K 1 B1 6 pieces: one contains mucosa [not target] labeled, as well as muscularis; others are well dissected muscularis propria (target) 7.9 Colon Colon - Sigmoid 0001159 266 888 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.994248 146307 0.975895 0.995744 0.830779 21175 1 76 0.00260678 130 0 5.76799e+07 0.0238281 337146 5.79264e+07 7.49626e+06 21186 2.87493e+07 0 0.145116 0.995744 0.827243 5.76799e+07 0.00371696 1.24254e+07 4.83447e+06 1.24959e+07 134 1.24636e+07 1.03275e+07 0.00316104 1.25402e+07 50.1531 0.00582025 0.99724 0 50.1413 GTEX-16NFA-1526-SM-7KULS 1 B1 6 pieces; well trimmed; <5% dermal fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 276 878 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.990699 420310 0.970938 0.992546 0.807259 23602 1 76 0.00387716 200 0 8.42209e+07 0.0287943 673390 8.48534e+07 6.48728e+06 23621 4.18993e+07 0 0.163678 0.992546 0.801242 8.42209e+07 0.00480456 1.83304e+07 1.23286e+07 1.85376e+07 193 1.85787e+07 1.42864e+07 0.00434 1.84447e+07 49.819 0.00793593 0.994394 0 50.2809 GTEX-16NFA-1626-SM-7KUES 1 B1 2 pieces; well dissected; mild to moderate diffuse lymphocytic infiltrate; 1 piece has 20% internal fat content 7.5 Salivary Gland Minor Salivary Gland 0006330 276 878 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.986631 206729 0.970328 0.990374 0.798739 24552 1 76 0.00388442 168 0 7.88363e+07 0.0279186 246957 7.96025e+07 7.26834e+06 24584 3.91048e+07 0 0.17159 0.990374 0.79105 7.88363e+07 0.00404323 1.71287e+07 9.5185e+06 1.73543e+07 175 1.74844e+07 1.3987e+07 0.00396353 1.72761e+07 49.7004 0.00310238 0.994117 0 50.3271 GTEX-16NFA-2326-SM-7KUE5 1 B1 6 pieces; 10% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 304 850 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.984865 275271 0.973341 0.989972 0.812695 24391 1 76 0.00345953 223 0 8.52123e+07 0.0263809 515482 8.60755e+07 7.9358e+06 24425 4.22548e+07 0 0.160646 0.989972 0.804545 8.52123e+07 0.00371484 1.84682e+07 8.79269e+06 1.87282e+07 206 1.89097e+07 1.55212e+07 0.00358652 1.86977e+07 49.7181 0.00598872 0.995079 0 50.3494 GTEX-16NFA-2426-SM-7KUL5 1 B1 2 pieces; 10% & 30% internal fat content 8.3 Muscle Muscle - Skeletal 0011907 308 846 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 EXCLUDE 0.992012 398265 0.982754 0.99392 0.87071 20188 1 76 0.00380095 274 0 1.00154e+08 0.0170244 1.31564e+06 1.00767e+08 7.0937e+06 20198 4.98694e+07 0 0.112044 0.99392 0.865416 1.00154e+08 0.00469178 2.15577e+07 1.61936e+07 2.19729e+07 282 2.20128e+07 1.99233e+07 0.00424551 2.16853e+07 49.6253 0.0130562 0.995827 0 50.4769 GTEX-16NFA-2526-SM-7KUFT 1 B1 2 pieces; 10% internal fat content 6.8 Nerve Nerve - Tibial 0001323 310 844 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 EXCLUDE 0.943522 708369 0.94524 0.949125 0.712357 25328 1 76 0.00485124 179 0 8.54002e+07 0.0543211 306778 8.99778e+07 7.69422e+06 25366 4.21939e+07 0 0.232882 0.949125 0.676116 8.54002e+07 0.00559743 1.81348e+07 2.56518e+07 1.83649e+07 181 1.85997e+07 1.21562e+07 0.00522213 1.83652e+07 49.6827 0.00340949 0.954729 0 50.3152 GTEX-16NFA-5001-SM-AN44L B1 Heart Heart - Left Ventricle 0006566 224 ChIP-Seq GTEX-16NFA-5003-SM-AN44K B1 Lung Lung 0008952 236 ChIP-Seq GTEX-16NFA-5018-SM-AN44N B1 Muscle Muscle - Skeletal 0011907 308 ChIP-Seq GTEX-16NGA-0004-SM-6RBKH B1 Blood Whole Blood 0013756 -43 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-6051 09/30/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16NGA-0004-SM-6UH29 B1 Blood Whole Blood 0013756 -43 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16NGA-0006-SM-9JGFQ B1 7.5 Blood Whole Blood 0013756 -43 BP-50067 RNA isolation_PAXgene Blood RNA (Manual) 03/03/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.980079 552352 0.973221 0.981119 0.809648 20546 1 76 0.00240608 269 0 1.33749e+08 0.026077 509155 1.36323e+08 6.91293e+06 20564 6.66523e+07 0 0.163574 0.981119 0.79436 1.33749e+08 0.00324468 3.0421e+07 1.24371e+08 3.06704e+07 305 3.0704e+07 3.06342e+07 0.00282494 3.05365e+07 49.8633 0.00373492 0.982158 0 50.2042 GTEX-16NGA-0008-SM-EAZC7 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 227 BP-50125 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992756 428963 0.980462 0.993583 0.858574 20618 1 76 0.00188286 227 0 9.67468e+07 0.0192108 264290 9.73716e+07 6.86347e+06 20633 4.82362e+07 0 0.121888 0.993583 0.853064 9.67468e+07 0.00273186 2.17598e+07 1.17324e+07 2.18386e+07 222 2.18286e+07 2.61163e+07 0.00230701 2.18523e+07 50.0272 0.00271424 0.994409 0 50.0903 GTEX-16NGA-0126-SM-72D6U 0 B1 2 pieces; adrenal cortex and medulla 9.3 Adrenal Gland Adrenal Gland 0002369 101 531 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.99431 156203 0.977102 0.995692 0.831932 22089 1 76 0.00309423 130 0 6.89594e+07 0.0224907 1.44228e+06 6.92578e+07 4.52562e+06 22108 3.43748e+07 0 0.14517 0.995692 0.828348 6.89594e+07 0.00374574 1.5128e+07 7.34524e+06 1.52768e+07 156 1.52472e+07 1.16312e+07 0.00341953 1.52435e+07 49.9939 0.0208247 0.997074 0 50.2447 GTEX-16NGA-0226-SM-718AI 1 B1 2 pieces; atelectasis alternating with dilated alveolar spaces; one piece contains bronchi with prominent smooth muscle, hyperplasia of submucosal mucous glands and peribronchial lymphocytic ifiltrate (outlined) and cartlilage (arrowed); thick-walled vessels ; anthracosis 8.1 Lung Lung 0008952 123 509 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967577 345356 0.9709 0.980871 0.80626 25829 1 76 0.00281313 280 0 1.04447e+08 0.0286547 478624 1.06484e+08 4.92672e+06 25863 5.1347e+07 0 0.16464 0.980871 0.790837 1.04447e+08 0.00574123 2.27818e+07 9.51085e+06 2.28018e+07 263 2.35161e+07 1.93265e+07 0.00425733 2.34494e+07 49.929 0.00449479 0.994165 0 50.0219 GTEX-16NGA-0326-SM-718AJ 1 B1 2 pieces; mild interstitial fibrosis and aggregates of lymphocytes (rep. outlined) consistent with Hashimoto's (lymphocytic) thyroiditis 7.1 Thyroid Thyroid 0002046 121 511 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966512 313860 0.964047 0.979952 0.751916 26082 1 76 0.0030275 212 0 1.05476e+08 0.0351827 622474 1.07634e+08 4.99511e+06 26130 5.18192e+07 0 0.212131 0.979952 0.736841 1.05476e+08 0.00599761 2.27365e+07 1.19847e+07 2.272e+07 224 2.3404e+07 1.7044e+07 0.00449219 2.34281e+07 50.0258 0.00578325 0.993392 0 49.9818 GTEX-16NGA-0426-SM-7LG6K 0 B1 2 pieces; corpora albicantia and corpus luteum 8.3 Ovary Ovary 0000992 122 510 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980864 553477 0.971448 0.986887 0.804268 24188 1 76 0.00363565 220 0 9.74288e+07 0.0282655 368787 9.87234e+07 1.48691e+07 24217 4.82419e+07 0 0.16718 0.986887 0.793721 9.74288e+07 0.00553221 2.12725e+07 1.30006e+07 2.1528e+07 242 2.18631e+07 2.02934e+07 0.00457814 2.14951e+07 49.5757 0.00373556 0.99291 0 50.2985 GTEX-16NGA-0526-SM-731AJ 1 B1 2 fragmented pieces; lobulated mature adipose tissue with scant fibrovascular component 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 123 509 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990962 222757 0.975623 0.992976 0.817405 22741 1 76 0.00336416 155 0 7.26002e+07 0.024082 710962 7.31137e+07 3.17349e+06 22757 3.6133e+07 0 0.158218 0.992976 0.811664 7.26002e+07 0.00377379 1.588e+07 5.96961e+06 1.60796e+07 167 1.60813e+07 1.18496e+07 0.00356856 1.60132e+07 49.8939 0.00972406 0.99499 0 50.3123 GTEX-16NGA-0626-SM-72D72 1 B1 2 pieces; predominantly myometrium with scant endemetrial component (outlined) 8.8 Uterus Uterus 0000995 125 507 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.994403 97498 0.971808 0.995769 0.809819 21901 1 76 0.00247737 136 0 5.94263e+07 0.0278298 107270 5.96789e+07 3.74353e+06 21915 2.96191e+07 0 0.161989 0.995769 0.806393 5.94263e+07 0.00310439 1.29952e+07 4.13139e+06 1.30856e+07 131 1.30856e+07 1.13366e+07 0.00279045 1.3071e+07 49.972 0.00179745 0.997134 0 50.1733 GTEX-16NGA-0726-SM-731AO 0 B1 6 pieces; essentially well trimmed except one piece with attached ~1mm external fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 126 506 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990153 188375 0.970743 0.992161 0.798409 23163 1 76 0.00335476 161 0 6.48428e+07 0.0290063 648369 6.53552e+07 2.96051e+06 23182 3.2262e+07 0 0.172334 0.992161 0.792151 6.48428e+07 0.00383168 1.41717e+07 6.04112e+06 1.42875e+07 148 1.42949e+07 1.09792e+07 0.00359273 1.4287e+07 49.9862 0.0099207 0.994169 0 50.2035 GTEX-16NGA-0826-SM-718AF 0 B1 2 pieces; mature adipose tissue and lobular and ductal structures embedded in fibrotic stroma with focal area of periductal hyalinization (outlined) 7.6 Breast Breast - Mammary Tissue 0008367 151 481 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968204 372315 0.969334 0.98053 0.804483 27829 1 76 0.00281097 387 0 1.51706e+08 0.0300713 1.04097e+06 1.54719e+08 7.64063e+06 27892 7.45911e+07 0 0.164851 0.98053 0.78882 1.51706e+08 0.00571519 3.28988e+07 1.56329e+07 3.28684e+07 374 3.37973e+07 2.93855e+07 0.00424482 3.38245e+07 50.0201 0.00672813 0.992856 0 49.9769 GTEX-16NGA-0926-SM-718AG 0 B1 6 pieces; target muscularis with small focus of residual mucosa 7.7 Colon Colon - Sigmoid 0001159 131 501 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.969952 288451 0.972595 0.982232 0.812225 24143 1 76 0.00279529 214 0 9.83575e+07 0.0271221 806659 1.00137e+08 4.68552e+06 24167 4.84251e+07 0 0.160371 0.982232 0.797793 9.83575e+07 0.00564011 2.09583e+07 8.89116e+06 2.10215e+07 239 2.15717e+07 1.74673e+07 0.00419992 2.15451e+07 49.9691 0.00805557 0.994511 0 50.0752 GTEX-16NGA-1026-SM-7KFS3 0 B1 6 pieces; well preserved colonic target mucosa and muscularis 8.2 Colon Colon - Transverse 0001157 133 499 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.99184 231249 0.974978 0.993583 0.837145 23393 1 76 0.00342203 165 0 7.69743e+07 0.0242599 823692 7.74715e+07 5.74486e+06 23407 3.82863e+07 0 0.137833 0.993583 0.831774 7.69743e+07 0.00365534 1.65961e+07 7.47407e+06 1.68531e+07 180 1.68284e+07 1.36532e+07 0.00353848 1.67505e+07 49.8841 0.0106322 0.995326 0 50.3842 GTEX-16NGA-1126-SM-7KFSY 1 B1 6 pieces; mucosa and abundant target mucosal lymphoid tissue, few foci of muscularis 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 147 485 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989456 255297 0.972504 0.991105 0.81973 25016 1 76 0.0039504 160 0 7.70584e+07 0.026092 752216 7.77499e+07 5.99282e+06 25043 3.82856e+07 0 0.152774 0.991105 0.812439 7.70584e+07 0.00405375 1.69472e+07 1.02306e+07 1.72131e+07 174 1.72083e+07 1.32203e+07 0.00400199 1.70761e+07 49.8072 0.00967481 0.992755 0 50.3891 GTEX-16NGA-1226-SM-7KFSD 1 B1 6 pieces; target muscularis with small amounts of attached loose connective tissue 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 159 473 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993296 193306 0.97732 0.994966 0.850855 22555 1 76 0.00310272 174 0 8.01062e+07 0.0223589 636687 8.05115e+07 5.85042e+06 22568 3.98825e+07 0 0.126464 0.994966 0.846572 8.01062e+07 0.00327755 1.72444e+07 6.83768e+06 1.75134e+07 193 1.74625e+07 1.52841e+07 0.00318999 1.74228e+07 49.9431 0.00790803 0.996636 0 50.3871 GTEX-16NGA-1326-SM-718AH 1 B1 6 pieces; target muscularis with small amounts of attached loose connective tissue 8.8 Esophagus Esophagus - Muscularis 0004648 163 469 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967965 366430 0.976362 0.98133 0.84827 23625 1 76 0.00270151 283 0 1.10329e+08 0.02327 769320 1.12428e+08 5.01682e+06 23640 5.42472e+07 0 0.128093 0.98133 0.832432 1.10329e+08 0.00563725 2.34629e+07 9.58747e+06 2.35105e+07 318 2.41833e+07 2.15535e+07 0.00414939 2.41813e+07 49.998 0.00684279 0.994695 0 50.0507 GTEX-16NGA-1426-SM-718AC 0 B1 6 pieces; target squamus mucosa and muscularis with submucosal glands in 4 of 6 pieces (outlined) 9.8 Esophagus Esophagus - Mucosa 0006920 164 468 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967128 292407 0.977085 0.980507 0.829472 23899 1 76 0.00276182 223 0 1.0312e+08 0.0223773 541414 1.0517e+08 4.61662e+06 23922 5.072e+07 0 0.147613 0.980507 0.813303 1.0312e+08 0.0057569 2.29282e+07 1.24463e+07 2.29884e+07 246 2.36942e+07 2.12078e+07 0.00423893 2.36268e+07 49.9288 0.00514799 0.993886 0 50.0656 GTEX-16NGA-1526-SM-72D56 1 B1 6 pieces; essentially well preserved gastric mucosa and muscularis 7.7 Stomach Stomach 0000945 167 465 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.985573 107835 0.969656 0.986817 0.819843 23631 1 76 0.00316498 206 0 8.01093e+07 0.0300787 1.17934e+06 8.11795e+07 4.37666e+06 23650 3.98906e+07 0 0.149813 0.986817 0.809035 8.01093e+07 0.00391536 1.75422e+07 2.19318e+07 1.7724e+07 196 1.76896e+07 1.42648e+07 0.0035397 1.76772e+07 49.9826 0.0145275 0.988061 0 50.2577 GTEX-16NGA-1626-SM-72D6M 1 B1 6 pieces; 3 of 6 pieces contain squamous epithelium (arrows) 8.2 Vagina Vagina 0000996 173 459 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991662 115990 0.977214 0.993214 0.799577 21199 1 76 0.00279244 112 0 5.1571e+07 0.0223581 156773 5.19233e+07 3.94116e+06 21210 2.56956e+07 0 0.177638 0.993214 0.794151 5.1571e+07 0.00343761 1.16055e+07 7.58606e+06 1.16559e+07 110 1.16748e+07 9.84308e+06 0.00311452 1.16614e+07 49.9711 0.00301932 0.994767 0 50.1083 GTEX-16NGA-1726-SM-731B4 0 B1 6 pieces; well trimmed 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 227 405 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990161 239519 0.969006 0.99206 0.77574 23511 1 76 0.00329846 187 0 7.50512e+07 0.0307869 525324 7.56519e+07 3.43796e+06 23541 3.73449e+07 0 0.193266 0.99206 0.769581 7.50512e+07 0.00374471 1.62167e+07 7.22394e+06 1.63063e+07 166 1.63309e+07 1.21978e+07 0.00352115 1.63266e+07 49.9934 0.00694396 0.993959 0 50.1377 GTEX-16NGA-1826-SM-7LG5L 1 B1 2 pieces; lobulated mature adipose tissue with thin fibrovascular septa 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 228 404 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980032 365417 0.975315 0.985519 0.819825 23806 1 76 0.00399344 211 0 9.25043e+07 0.0243646 1.01284e+06 9.38636e+07 1.36907e+07 23831 4.5828e+07 0 0.155489 0.985519 0.807953 9.25043e+07 0.00574777 2.00357e+07 1.18057e+07 2.02927e+07 243 2.04849e+07 1.5542e+07 0.00486573 2.03126e+07 49.7889 0.0107905 0.991005 0 50.3186 GTEX-16NGA-1926-SM-7LTA6 0 B1 2 pieces 9 Muscle Muscle - Skeletal 0011907 226 406 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989906 433964 0.983052 0.992812 0.868189 21022 1 76 0.00313341 295 0 1.11942e+08 0.0166851 1.34064e+06 1.12753e+08 1.19698e+07 21035 5.56672e+07 0 0.114863 0.992812 0.861948 1.11942e+08 0.00413292 2.42627e+07 1.46499e+07 2.43705e+07 276 2.45255e+07 2.25637e+07 0.0036317 2.4395e+07 49.8667 0.0118901 0.995719 0 50.1108 GTEX-16NGA-2026-SM-7LG4Q 1 B1 4 pieces; ~5-10% internal and external fat 8 Nerve Nerve - Tibial 0001323 224 408 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980522 299297 0.975491 0.987495 0.830229 23762 1 76 0.00366792 229 0 9.17615e+07 0.0241256 454018 9.29234e+07 1.40912e+07 23786 4.54119e+07 0 0.145263 0.987495 0.819847 9.17615e+07 0.00567916 2.00679e+07 9.10052e+06 2.03473e+07 245 2.06207e+07 1.79362e+07 0.00466644 2.04038e+07 49.7356 0.00488594 0.994468 0 50.3456 GTEX-16NGA-2126-SM-7PC1G 1 B1 2 pieces; ~0.5mm of attached adventitia 6.8 Blood Vessel Artery - Tibial 0007610 225 407 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989239 266104 0.977598 0.992154 0.847112 21736 1 76 0.00365551 211 0 9.62474e+07 0.0220141 696540 9.70085e+07 1.61403e+07 21756 4.78197e+07 0 0.130487 0.992154 0.840466 9.62474e+07 0.00457897 2.05665e+07 8.26616e+06 2.08628e+07 251 2.09246e+07 1.88778e+07 0.00411588 2.07665e+07 49.8104 0.0071802 0.995069 0 50.3576 GTEX-16NPV-0003-SM-6RBJY C1 Blood Whole Blood 0013756 526 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16NPV-0003-SM-6UH1Q C1 Blood Whole Blood 0013756 526 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16NPV-0005-SM-7PC2F C1 7.2 Blood Whole Blood 0013756 526 BP-50230 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.976899 629396 0.96913 0.981893 0.768701 19533 1 76 0.00374252 126 0 8.92055e+07 0.0298323 285674 9.08505e+07 1.56959e+07 19547 4.41794e+07 0 0.200429 0.981893 0.754782 8.92055e+07 0.00553674 2.03094e+07 1.01256e+08 2.03845e+07 148 2.05809e+07 1.91204e+07 0.00463507 2.05715e+07 49.9887 0.00314444 0.986886 0 50.0922 GTEX-16NPV-0008-SM-EAZC2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 619 BP-50197 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99284 954648 0.959438 0.993793 0.826618 21312 1 76 0.00175638 288 0 1.12581e+08 0.0402263 439242 1.13285e+08 8.72351e+06 21333 5.61242e+07 0 0.13282 0.993793 0.821487 1.12581e+08 0.00259699 2.47487e+07 3.6837e+07 2.50149e+07 276 2.50383e+07 2.8572e+07 0.00217628 2.48455e+07 49.8067 0.00387733 0.994745 0 50.2675 GTEX-16NPV-0011-R10a-SM-79OKA C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 540 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976985 550249 0.954638 0.980995 0.815644 22755 1 76 0.00546889 120 0 5.63469e+07 0.0451246 4.66178e+06 5.74385e+07 1.29735e+07 22769 2.80249e+07 0 0.138994 0.980995 0.800143 5.63469e+07 0.00680242 1.21916e+07 2.01306e+07 1.23909e+07 145 1.24025e+07 5.72196e+06 0.00613293 1.23869e+07 49.9686 0.0811611 0.985004 0 50.4054 GTEX-16NPV-0011-R10a-SM-AHZM1 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 540 ChIP-Seq GTEX-16NPV-0011-R10a-SM-CYKT6 C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 540 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 RIP-Seq GTEX-16NPV-0011-R11a-SM-7IGMK C1, A1 6.1 Brain Brain - Cerebellar Hemisphere 0002037 540 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6445,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.989036 1.10322e+06 0.94061 0.9912 0.774843 23705 1 76 0.00260873 370 0 1.12743e+08 0.0592205 7.85516e+06 1.13744e+08 6.33558e+06 23725 5.61e+07 0 0.165767 0.9912 0.768024 1.12743e+08 0.00366698 2.38501e+07 5.35723e+07 2.4125e+07 339 2.39681e+07 6.82522e+06 0.0031367 2.42092e+07 50.2502 0.0690599 0.993364 0 50.2865 GTEX-16NPV-0011-R1b-SM-7MGVZ C1, A1 5.6 Brain Brain - Hippocampus 0001954 540 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988004 470226 0.959521 0.991155 0.853399 19882 1 76 0.0033642 196 0 6.96069e+07 0.0403828 1.0952e+07 7.0228e+07 5.48686e+06 19891 3.46377e+07 0 0.106122 0.991155 0.845851 6.96069e+07 0.00425445 1.50086e+07 2.74259e+07 1.57617e+07 253 1.54506e+07 3.55846e+06 0.00380791 1.54906e+07 50.0646 0.155949 0.994307 0 51.2237 GTEX-16NPV-0011-R5a-SM-7EPGK C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 540 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990542 2.28406e+06 0.948308 0.992882 0.814156 26151 1 76 0.00344029 374 0 2.06175e+08 0.0514092 1.99439e+07 2.07653e+08 2.64303e+07 26190 1.02693e+08 0 0.134152 0.992882 0.808361 2.06175e+08 0.0118172 4.34013e+07 1.24364e+08 4.5139e+07 380 4.48442e+07 1.94924e+07 0.0076189 4.41075e+07 49.5859 0.0960445 0.995222 0 50.9813 GTEX-16NPV-0011-R8a-SM-7EPH8 C1, A1 6.9 Brain Brain - Hypothalamus 0001898 540 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990458 1.00685e+06 0.94395 0.993004 0.821326 23680 1 76 0.00348943 140 0 8.29992e+07 0.0558123 6.47998e+06 8.3584e+07 1.07519e+07 23699 4.13286e+07 0 0.122624 0.993004 0.81558 8.29992e+07 0.011846 1.75252e+07 4.11353e+07 1.83618e+07 176 1.82488e+07 7.15963e+06 0.007657 1.78259e+07 49.4139 0.0775266 0.995551 0 51.1657 GTEX-16NPV-0011-R9b-SM-79ONF C1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 540 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.990595 215609 0.962044 0.990566 0.838156 21044 1 76 0.00345839 140 0 5.76704e+07 0.0377398 6.14611e+06 5.82196e+07 3.62562e+06 21057 2.8721e+07 0 0.123888 0.990566 0.830249 5.76704e+07 0.00452176 1.26291e+07 1.07093e+07 1.31852e+07 164 1.30015e+07 5.08599e+06 0.00399009 1.27917e+07 49.5933 0.105568 0.990536 0 51.0772 GTEX-16NPV-0526-SM-79OKI 1 C1 2 pieces; foci of medial calcification; no plaques; well trimmed 7 Blood Vessel Artery - Tibial 0007610 623 1217 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.978716 123466 0.972026 0.982281 0.802561 21102 1 76 0.00480292 121 0 5.7751e+07 0.0276573 351192 5.87927e+07 1.31877e+07 21115 2.8707e+07 0 0.169465 0.982281 0.78834 5.7751e+07 0.00593896 1.23859e+07 5.82497e+06 1.24477e+07 126 1.24892e+07 1.0011e+07 0.00536888 1.25375e+07 50.0965 0.00597339 0.985846 0 50.1243 GTEX-16NPV-0626-SM-7IGOR 1 C1 2 pieces; no fibrous content 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 624 1216 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994703 221031 0.971453 0.994887 0.781109 22768 1 76 0.00206238 142 0 6.73329e+07 0.0281933 596656 6.7679e+07 2.62486e+06 22787 3.35583e+07 0 0.190345 0.994887 0.777115 6.73329e+07 0.00236174 1.47232e+07 9.96512e+06 1.48931e+07 159 1.48709e+07 1.10451e+07 0.00221203 1.47675e+07 49.8254 0.00881597 0.995071 0 50.2869 GTEX-16NPV-1526-SM-7KUL6 1 C1 6 pieces; well dissected: pure muscle 5.8 Esophagus Esophagus - Muscularis 0004648 639 1206 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989901 199325 0.970926 0.99214 0.822918 22653 1 76 0.00371484 202 0 8.07244e+07 0.028899 2.18892e+06 8.13639e+07 6.18334e+06 22672 4.01437e+07 0 0.148008 0.99214 0.81645 8.07244e+07 0.00491141 1.73837e+07 7.91603e+06 1.76781e+07 227 1.76709e+07 1.02228e+07 0.00431178 1.75545e+07 49.8348 0.0269028 0.99438 0 50.4198 GTEX-16NPV-2426-SM-6M482 1 C1 2 pieces; 10% internnal fat; focus of atrophy (2 sq mm circled) 7 Muscle Muscle - Skeletal 0011907 652 1199 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994657 95569 0.976642 0.996163 0.843936 20251 1 76 0.00255241 141 0 6.093e+07 0.0231959 1.17058e+06 6.11647e+07 8.09042e+06 20263 3.03804e+07 0 0.132706 0.996163 0.840698 6.093e+07 0.00361697 1.34739e+07 6.64842e+06 1.35034e+07 154 1.34861e+07 9.44094e+06 0.00308388 1.3571e+07 50.1569 0.0191382 0.997669 0 50.0547 GTEX-16NPV-2526-SM-6M483 1 C1 6 pieces: 3 have sloughed epithelium 6.8 Vagina Vagina 0000996 655 1196 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993073 97234 0.96838 0.994666 0.761558 23002 1 76 0.00256296 129 0 6.20973e+07 0.0314188 365503 6.24303e+07 8.29183e+06 23025 3.0936e+07 0 0.206821 0.994666 0.757496 6.20973e+07 0.00358536 1.36633e+07 7.20789e+06 1.36782e+07 144 1.36516e+07 9.53508e+06 0.00307334 1.3789e+07 50.2503 0.00585458 0.996259 0 50.0272 GTEX-16NPV-2626-SM-6M484 2 C1 6 pieces; glands autolyzed, muscle intact; well dissected 5.8 Colon Colon - Transverse 0001157 657 1195 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993303 67848 0.968872 0.994724 0.796202 22816 1 76 0.0025859 123 0 5.33727e+07 0.0308812 729570 5.36558e+07 6.98279e+06 22833 2.65926e+07 0 0.17267 0.994724 0.792002 5.33727e+07 0.00350709 1.16744e+07 5.48679e+06 1.16594e+07 132 1.16215e+07 7.90075e+06 0.00304584 1.17871e+07 50.3536 0.0135972 0.996145 0 49.9678 GTEX-16NPV-3226-SM-7MGW6 2 C1 1 piece; all adenohypophysis 5.6 Pituitary Pituitary 0000007 666 1189 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990602 378496 0.94623 0.992581 0.761634 24510 1 76 0.00285866 133 0 6.98004e+07 0.053588 1.09859e+06 7.03221e+07 5.4667e+06 24544 3.47613e+07 0 0.184596 0.992581 0.755984 6.98004e+07 0.00366734 1.35561e+07 1.79045e+07 1.37832e+07 158 1.37823e+07 9.69983e+06 0.00326219 1.3684e+07 49.821 0.0156222 0.99456 0 50.4153 GTEX-16NPX-0002-SM-6RBK7 C1 Blood Whole Blood 0013756 507 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16NPX-0002-SM-6UH1Y C1 Blood Whole Blood 0013756 507 BP-50229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/07/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16NPX-0005-SM-7MKGG C1 7.3 Blood Whole Blood 0013756 507 BP-50230 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982029 499763 0.968767 0.987731 0.800448 18778 1 76 0.00435566 126 0 7.02285e+07 0.0306192 236477 7.11008e+07 1.0681e+07 18789 3.47765e+07 0 0.168319 0.987731 0.790627 7.02285e+07 0.00584857 1.52598e+07 3.08223e+07 1.55454e+07 138 1.56814e+07 1.32829e+07 0.00509781 1.55254e+07 49.7502 0.00332594 0.993432 0 50.4635 GTEX-16NPX-0008-SM-EAZC1 C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 565 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993284 609042 0.981103 0.994258 0.857212 21407 1 76 0.0017172 295 0 1.17049e+08 0.0185629 298369 1.17725e+08 9.38395e+06 21429 5.83472e+07 0 0.123891 0.994258 0.85229 1.17049e+08 0.00260622 2.64459e+07 1.26996e+07 2.65356e+07 291 2.65827e+07 3.1562e+07 0.00216128 2.65116e+07 49.9331 0.00253445 0.995233 0 50.0846 GTEX-16NPX-0226-SM-79OMT 0 C1 6 pieces, minimal adherent dermal fat; squamous epthelium is ~30-40 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 564 1124 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992633 141581 0.968679 0.992694 0.745641 23550 1 76 0.00312865 130 0 6.04693e+07 0.0311186 339963 6.09144e+07 3.37798e+06 23576 3.01159e+07 0 0.223038 0.992694 0.740193 6.04693e+07 0.00437182 1.32172e+07 5.92703e+06 1.32621e+07 133 1.32674e+07 8.92756e+06 0.00375019 1.32158e+07 49.9027 0.005581 0.992754 0 50.0848 GTEX-16NPX-0326-SM-7EWDI 0 C1 2 pieces, !0-15% fascia, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 566 1122 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991301 142203 0.97256 0.993297 0.802037 22718 1 76 0.00234731 135 0 6.15518e+07 0.0271376 357322 6.19672e+07 5.27141e+06 22742 3.0636e+07 0 0.170523 0.993297 0.796661 6.15518e+07 0.00355244 1.35261e+07 6.61242e+06 1.36249e+07 148 1.36433e+07 1.02669e+07 0.00294866 1.36235e+07 49.9636 0.00576631 0.995293 0 50.182 GTEX-16NPX-0426-SM-7EWDJ 0 C1 2 pieces, minimal adherent fat, good aliquots 6.3 Nerve Nerve - Tibial 0001323 567 1122 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990591 153132 0.961777 0.992521 0.672251 24683 1 76 0.00249957 146 0 7.42064e+07 0.0379725 208437 7.47656e+07 6.30625e+06 24738 3.69133e+07 0 0.289525 0.992521 0.667223 7.42064e+07 0.00372083 1.6284e+07 7.54738e+06 1.63139e+07 152 1.63443e+07 9.7682e+06 0.00310901 1.63874e+07 50.0659 0.00278787 0.994451 0 50.0459 GTEX-16NPX-0626-SM-7KULB 0 C1 6 pieces, Minimal interstitial fat, ~10%, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 570 1120 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.992329 404222 0.983544 0.994145 0.878963 20509 1 76 0.00327336 203 0 8.99747e+07 0.0161648 1.01122e+06 9.05046e+07 6.96681e+06 20522 4.47991e+07 0 0.104581 0.994145 0.873817 8.99747e+07 0.00394941 1.92946e+07 1.04567e+07 1.95602e+07 238 1.96481e+07 1.96635e+07 0.00361077 1.93516e+07 49.6199 0.0111731 0.995961 0 50.3418 GTEX-16NPX-0726-SM-7KULC 0 C1 6 pieces, minimal adherent fat, squamous epithelium is ~50-60 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 574 1116 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991293 282240 0.974827 0.993047 0.808031 23994 1 76 0.00350912 160 0 7.34493e+07 0.024882 372457 7.39635e+07 5.44716e+06 24015 3.65484e+07 0 0.166796 0.993047 0.802413 7.34493e+07 0.00434707 1.62085e+07 7.58887e+06 1.63584e+07 167 1.63928e+07 1.28997e+07 0.00392735 1.63023e+07 49.8617 0.00503569 0.994801 0 50.2301 GTEX-16NPX-0826-SM-6M489 1 C1 2 pieces, no abnormalities 8 Heart Heart - Atrial Appendage 0006631 605 1086 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.994707 111404 0.976642 0.996109 0.816025 21419 1 76 0.00242149 121 0 6.48639e+07 0.0224654 1.32232e+06 6.51173e+07 8.85580e+06 21434 3.23214e+07 0 0.160617 0.996109 0.81285 6.48639e+07 0.0032849 1.39926e+07 8.03030e+06 1.39335e+07 162 1.38895e+07 9.59152e+06 0.00285259 1.41186e+07 50.409 0.0203067 0.997511 0 49.8941 GTEX-16NPX-0926-SM-7KUEZ 1 C1 2 pieces, moderate ischemic damage, microinfarct (~1.5mm) noted, delineated 6.1 Heart Heart - Left Ventricle 0006566 607 1084 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987563 313569 0.978563 0.99182 0.830225 22292 1 76 0.00309757 264 0 9.97946e+07 0.0213203 5.07937e+06 1.00618e+08 9.32196e+06 22313 4.95504e+07 0 0.148337 0.99182 0.823435 9.97946e+07 0.00336411 2.21521e+07 1.59119e+07 2.21691e+07 315 2.23531e+07 1.03759e+07 0.00323027 2.23254e+07 49.969 0.0504819 0.996078 0 50.0192 GTEX-16NPX-1026-SM-6PAM7 1 C1 2 pieces, ~20% fascia, rep delineated 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 608 1084 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977126 207865 0.977261 0.985562 0.79767 24150 1 76 0.00348125 212 0 9.72281e+07 0.0219808 361550 9.86524e+07 1.141e+07 24177 4.80137e+07 0 0.179591 0.985562 0.786153 9.72281e+07 0.00614413 2.14472e+07 1.11913e+07 2.13426e+07 232 2.17243e+07 1.63691e+07 0.00480129 2.18715e+07 50.1689 0.00366489 0.993999 0 49.8778 GTEX-16NPX-1426-SM-6LPK3 2 C1 2 pieces, no abnormalities 6.4 Thyroid Thyroid 0002046 615 1079 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992436 99195 0.967557 0.994472 0.764587 23238 1 76 0.00262467 115 0 5.68779e+07 0.0321633 282335 5.7194e+07 8.42619e+06 23265 2.83226e+07 0 0.20297 0.994472 0.76036 5.68779e+07 0.00351269 1.25108e+07 6.0255e+06 1.24373e+07 125 1.24337e+07 9.20552e+06 0.00306777 1.26228e+07 50.3774 0.00493644 0.996508 0 49.8528 GTEX-16NPX-1626-SM-6LLI5 1 C1 6 pieces, squamous mucosa is ~0.4mm, ~30-40% thickness 7.3 Esophagus Esophagus - Mucosa 0006920 618 1077 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.976616 181629 0.970325 0.984664 0.777936 23661 1 76 0.00256487 161 0 8.13123e+07 0.0294545 688307 8.25787e+07 7.36627e+06 23684 4.02388e+07 0 0.192389 0.984664 0.766005 8.13123e+07 0.00404545 1.80832e+07 1.05046e+07 1.81178e+07 193 1.83615e+07 1.24568e+07 0.00329911 1.84887e+07 50.1726 0.00833516 0.992712 0 50.0478 GTEX-16NPX-1726-SM-7KULP 1 C1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 619 1077 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990278 225385 0.968443 0.992157 0.775487 23719 1 76 0.00370018 199 0 8.33425e+07 0.0313895 2.35256e+06 8.40013e+07 6.67070e+06 23749 4.14581e+07 0 0.192956 0.992157 0.769405 8.33425e+07 0.00445593 1.80563e+07 9.44834e+06 1.84221e+07 234 1.84219e+07 9.23081e+06 0.00407734 1.81987e+07 49.6952 0.0280063 0.994037 0 50.5013 GTEX-16XZY-0002-SM-6RBKE B1 Blood Whole Blood 0013756 -74 BP-50303 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16XZY-0002-SM-6UH26 B1 Blood Whole Blood 0013756 -74 BP-50303 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/10/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16XZY-0006-SM-7SB99 B1 7.5 Blood Whole Blood 0013756 -74 BP-50309 RNA isolation_PAXgene Blood RNA (Manual) 03/10/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989006 2.7658e+06 0.901293 0.990784 0.701217 20161 1 76 0.00256252 206 0 1.06179e+08 0.0982143 519978 1.07167e+08 1.11839e+07 20190 5.28663e+07 0 0.200075 0.990784 0.694755 1.06179e+08 0.00387136 2.18252e+07 1.27674e+08 2.21868e+07 216 2.22112e+07 1.89559e+07 0.00321577 2.19942e+07 49.7546 0.00485204 0.992562 0 50.4108 GTEX-16XZY-0008-SM-EAZCI B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 670 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992647 220512 0.980733 0.993606 0.858697 19445 1 76 0.00168957 135 0 6.41759e+07 0.0189041 206045 6.45889e+07 4.78378e+06 19458 3.19943e+07 0 0.122036 0.993606 0.853207 6.41759e+07 0.0027727 1.43977e+07 7.09246e+06 1.44772e+07 134 1.44608e+07 1.70794e+07 0.00223061 1.44763e+07 50.0267 0.0031901 0.994566 0 50.1376 GTEX-16XZY-0126-SM-7IGQ9 0 B1 2 pieces, fragmented; congestion, portion of capsule in 1 piece 5.7 Spleen Spleen 0002106 458 668 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.992252 387415 0.963124 0.992768 0.818411 22951 1 76 0.00223785 166 0 7.13735e+07 0.0359627 441132 7.18934e+07 2.33266e+06 22977 3.55532e+07 0 0.144713 0.992768 0.812493 7.13735e+07 0.00279647 1.56756e+07 1.2635e+07 1.58583e+07 184 1.58058e+07 1.14158e+07 0.00251701 1.5766e+07 49.9369 0.00613592 0.993285 0 50.2897 GTEX-16XZY-0426-SM-793BI 1 B1 2 pieces; intramuscular vessels surrounded by ~1mm rim of adipose tissue; accentuation of interstitial connective tissue 7.6 Heart Heart - Left Ventricle 0006566 465 661 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995236 284161 0.984853 0.996251 0.864294 20087 1 76 0.002594 198 0 7.50416e+07 0.0149145 1.73196e+06 7.53239e+07 1.00987e+07 20100 3.74155e+07 0 0.120559 0.996251 0.861054 7.50416e+07 0.00288575 1.64759e+07 1.66424e+07 1.66009e+07 236 1.6604e+07 1.24679e+07 0.00273972 1.6545e+07 49.9109 0.0229935 0.997266 0 50.1888 GTEX-16XZY-0526-SM-7DHKY 1 B1 2 pieces; one consists of myocardium and ~30-40% fibrous tissue with focal fat; other consists of myocardium and intramuscular vessles (arrows) 8.3 Heart Heart - Atrial Appendage 0006631 469 657 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99265 206437 0.983688 0.993888 0.855483 22424 1 76 0.00317758 370 0 1.22429e+08 0.0157598 2.68862e+06 1.23182e+08 9.0367e+06 22443 6.09741e+07 0 0.128205 0.993888 0.850254 1.22429e+08 0.0047983 2.60335e+07 2.48801e+07 2.64866e+07 349 2.63926e+07 1.80099e+07 0.00398693 2.62431e+07 49.858 0.0218264 0.995126 0 50.4313 GTEX-16XZY-0726-SM-79OMU 1 B1 2 pieces; one with ~50% of fibrovascular and adipose tissue attached; other with central empty spaces (arrow, ? poor fixation) 6.5 Thyroid Thyroid 0002046 473 653 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993217 137414 0.968747 0.993449 0.78588 23849 1 76 0.00292166 137 0 6.93101e+07 0.0309874 247079 6.97671e+07 3.96041e+06 23881 3.45383e+07 0 0.182866 0.993449 0.780732 6.93101e+07 0.00416757 1.52315e+07 5.96229e+06 1.535e+07 154 1.53476e+07 1.17006e+07 0.00354447 1.52472e+07 49.8359 0.00354148 0.993681 0 50.1937 GTEX-16XZY-0926-SM-7938M 1 B1 6 pieces; superficial epithelial desquamation; squamous epithelium ~0.3mm thick, esophagitis, small portion of muscularis 9.2 Esophagus Esophagus - Mucosa 0006920 504 622 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993946 350434 0.976593 0.994661 0.831998 21740 1 76 0.00190893 129 0 5.70843e+07 0.0231221 213888 5.73907e+07 2.42647e+06 21754 2.84326e+07 0 0.144594 0.994661 0.827556 5.70843e+07 0.00240748 1.28753e+07 7.72251e+06 1.29195e+07 133 1.29964e+07 1.15885e+07 0.00215803 1.28423e+07 49.7018 0.00372687 0.995376 0 50.0858 GTEX-16XZY-2126-SM-79OK1 0 B1 6 pieces; ~10% external/internal fat; squamous epithelium 22 to 28 micron thick 7 Skin Skin - Sun Exposed (Lower leg) 0004264 671 455 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976174 189016 0.970141 0.98024 0.771267 24182 1 76 0.00510897 136 0 6.28654e+07 0.029629 349842 6.41327e+07 1.51206e+07 24206 3.12656e+07 0 0.198874 0.98024 0.756027 6.28654e+07 0.00648896 1.37079e+07 6.93808e+06 1.38141e+07 135 1.38834e+07 9.98992e+06 0.00579611 1.38791e+07 49.9923 0.00545497 0.984306 0 50.193 GTEX-16XZY-2226-SM-7938N 1 B1 2 pieces; ~15% internal fat, patchy atrophy 8.5 Muscle Muscle - Skeletal 0011907 755 371 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995872 241326 0.974245 0.996405 0.843774 20490 1 76 0.00155253 117 0 5.65831e+07 0.0255032 249415 5.67872e+07 2.35875e+06 20507 2.82065e+07 0 0.130471 0.996405 0.840741 5.65831e+07 0.00197899 1.19653e+07 4.81917e+06 1.2017e+07 130 1.2046e+07 1.19832e+07 0.00176565 1.19623e+07 49.8257 0.0043921 0.996939 0 50.1077 GTEX-16XZY-2326-SM-7EWDD 1 B1 2 pieces: ~10% internal/external fat; small skeletal muscle fragment (outlined) 6.3 Nerve Nerve - Tibial 0001323 758 368 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991552 476090 0.97037 0.993499 0.76826 26422 1 76 0.0022695 390 0 1.50323e+08 0.0293355 380669 1.51306e+08 1.26094e+07 26486 7.47959e+07 0 0.20211 0.993499 0.763266 1.50323e+08 0.00350231 3.29494e+07 1.39534e+07 3.31199e+07 391 3.31641e+07 2.59744e+07 0.0028847 3.3183e+07 50.0143 0.00251588 0.995446 0 50.129 GTEX-16XZY-2426-SM-7EPGQ 1 B1 2 pieces; one piece with adherent ~1mm fat/nerve 6.9 Blood Vessel Artery - Tibial 0007610 760 366 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6443,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.992453 186900 0.974426 0.994223 0.806045 24260 1 76 0.00263418 284 0 1.28196e+08 0.0252112 370815 1.28941e+08 1.57439e+07 24299 6.38786e+07 0 0.168381 0.994223 0.801388 1.28196e+08 0.0062184 2.78686e+07 1.21428e+07 2.82307e+07 318 2.82622e+07 2.47574e+07 0.0044231 2.80531e+07 49.8144 0.00287586 0.995994 0 50.3227 GTEX-16XZY-2526-SM-7DHL2 0 B1 2 pieces; 30% and 15% facia/vessels/glands 8.4 Adipose Tissue Adipose - Subcutaneous 0002190 761 365 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.987696 127151 0.976897 0.988175 0.801424 22653 1 76 0.00345655 156 0 7.33995e+07 0.022823 491759 7.42779e+07 6.16223e+06 22688 3.64682e+07 0 0.175472 0.988175 0.791948 7.33995e+07 0.00531312 1.62369e+07 7.19879e+06 1.64224e+07 175 1.6442e+07 1.13594e+07 0.00438438 1.62486e+07 49.7042 0.00662053 0.988654 0 50.284 GTEX-16XZY-5001-SM-AN456 B1 Heart Heart - Left Ventricle 0006566 465 ChIP-Seq GTEX-16XZY-5016-SM-AN457 B1 Muscle Muscle - Skeletal 0011907 756 ChIP-Seq GTEX-16XZZ-0001-SM-6RBK3 C1 Blood Whole Blood 0013756 312 BP-50303 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/10/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16XZZ-0001-SM-6UH1U C1 Blood Whole Blood 0013756 312 BP-50303 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/10/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16XZZ-0006-SM-7MKF5 C1 8.3 Blood Whole Blood 0013756 312 BP-50309 RNA isolation_PAXgene Blood RNA (Manual) 03/10/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.939058 361897 0.985357 0.943832 0.825159 16426 1 76 0.00338416 100 0 9.6012e+07 0.0129423 251405 1.01726e+08 1.20468e+07 16426 4.75758e+07 0 0.160198 0.943832 0.778811 9.6012e+07 0.00546288 2.33058e+07 1.8447e+08 2.28243e+07 143 2.3031e+07 2.8026e+07 0.00441826 2.36152e+07 50.6263 0.0024714 0.948605 0 49.4781 GTEX-16XZZ-0008-SM-EAZCJ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 441 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992299 485623 0.976727 0.993297 0.847468 21094 1 76 0.00174091 192 0 8.90809e+07 0.022878 431054 8.96821e+07 6.71532e+06 21118 4.43975e+07 0 0.129259 0.993297 0.841787 8.90809e+07 0.00258598 1.98212e+07 1.1539e+07 1.99346e+07 196 1.99193e+07 2.28927e+07 0.00216302 1.99289e+07 50.012 0.00480647 0.994295 0 50.1426 GTEX-16XZZ-0011-R10a-SM-AHZM2 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 322 ChIP-Seq GTEX-16XZZ-0011-R10b-SM-7LT91 C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 322 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989635 693465 0.955892 0.992641 0.818154 24726 1 76 0.00251483 271 0 9.79272e+07 0.0436591 4.13828e+06 9.86531e+07 1.12482e+07 24749 4.86935e+07 0 0.137738 0.992641 0.812134 9.79272e+07 0.00339777 2.13326e+07 2.567e+07 2.14985e+07 266 2.15729e+07 1.22464e+07 0.00295497 2.15255e+07 49.945 0.0419478 0.995648 0 50.1938 GTEX-16XZZ-0011-R11a-SM-7EPI3 C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 322 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989467 599619 0.94559 0.991996 0.771973 23924 1 76 0.00301043 196 0 1.04157e+08 0.0541364 5.23556e+06 1.04997e+08 1.37185e+07 23951 5.18587e+07 0 0.173617 0.991996 0.765794 1.04157e+08 0.0113625 2.22633e+07 3.30413e+07 2.28378e+07 221 2.27874e+07 8.75839e+06 0.0071758 2.2538e+07 49.7248 0.049864 0.994525 0 50.6369 GTEX-16XZZ-0011-R1a-SM-7LTAH C1, A1 8.1 Brain Brain - Hippocampus 0001954 322 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989691 1.09771e+06 0.950727 0.992572 0.799367 24992 1 76 0.00251481 277 0 1.04836e+08 0.048956 5.10652e+06 1.05621e+08 1.17187e+07 25025 5.21183e+07 0 0.15136 0.992572 0.793429 1.04836e+08 0.0035683 2.27792e+07 3.82055e+07 2.29114e+07 296 2.3051e+07 1.16128e+07 0.00304003 2.29116e+07 49.8483 0.0483476 0.995452 0 50.1447 GTEX-16XZZ-0011-R2a-SM-7IGPG C1, A1 5.8 Brain Brain - Substantia nigra 0002038 322 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6446 03/04/2015 TruSeq.v1 EXCLUDE 0.994872 244669 0.975358 0.995409 0.853096 19094 1 76 0.00125927 371 0 7.42017e+07 0.0245499 8.54545e+06 7.45439e+07 2.67685e+06 19102 3.70072e+07 0 0.122262 0.995409 0.849179 7.42017e+07 0.00162113 1.60213e+07 2.77580e+07 1.70385e+07 344 1.65785e+07 4.58696e+06 0.0014401 1.64957e+07 49.8749 0.114637 0.995947 0 51.5385 GTEX-16XZZ-0011-R3a-SM-7IGLH C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 322 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994535 752376 0.962673 0.99564 0.824875 23306 1 76 0.00157322 372 0 1.16704e+08 0.0371886 1.06706e+07 1.17215e+08 7.12001e+06 23332 5.81703e+07 0 0.137799 0.99564 0.821279 1.16704e+08 0.00246257 2.5146e+07 4.41639e+07 2.61334e+07 408 2.55483e+07 8.07327e+06 0.0020174 2.58218e+07 50.2662 0.0910345 0.996746 0 50.9628 GTEX-16XZZ-0011-R6a-SM-7IGNE C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 322 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99294 720599 0.96291 0.994345 0.830266 20748 1 76 0.00148725 367 0 8.85152e+07 0.0369859 8.76581e+06 8.90186e+07 5.74263e+06 20757 4.40977e+07 0 0.132644 0.994345 0.825571 8.85152e+07 0.00211261 1.86874e+07 4.93181e+07 1.99494e+07 360 1.94587e+07 4.853e+06 0.00179949 1.92666e+07 49.752 0.0984717 0.99575 0 51.6331 GTEX-16XZZ-0011-R7b-SM-7MGVT C1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 322 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6755 04/12/2015 TruSeq.v1 EXCLUDE 0.991602 602826 0.961754 0.993588 0.845194 19727 1 76 0.00204922 372 0 8.77633e+07 0.0381637 9.89012e+06 8.83296e+07 6.42087e+06 19733 4.37474e+07 0 0.116559 0.993588 0.839775 8.77633e+07 0.00287662 1.89555e+07 4.56956e+07 1.96835e+07 334 1.92612e+07 5.02655e+06 0.00246209 1.9496e+07 50.3029 0.111968 0.995575 0 50.9421 GTEX-16XZZ-0011-R8b-SM-7LT8S C1, A1 6.3 Brain Brain - Hypothalamus 0001898 322 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991576 604836 0.958332 0.993748 0.837028 22733 1 76 0.00225976 269 0 9.10614e+07 0.0415097 8.11647e+06 9.16344e+07 8.93512e+06 22742 4.53252e+07 0 0.121304 0.993748 0.831795 9.10614e+07 0.00300275 1.99899e+07 3.46806e+07 2.0051e+07 300 2.00327e+07 5.7982e+06 0.00263044 2.01561e+07 50.1535 0.0885745 0.99592 0 50.0763 GTEX-16XZZ-0011-R9b-SM-7DHKX C1, A1 8 Brain Brain - Spinal cord (cervical c-1) 0006469 322 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989824 393328 0.958573 0.990772 0.784841 22994 1 76 0.00346712 156 0 6.49811e+07 0.0409568 801156 6.55863e+07 5.13736e+06 23017 3.22944e+07 0 0.173731 0.990772 0.777599 6.49811e+07 0.00539681 1.44003e+07 9.56756e+06 1.45451e+07 153 1.4509e+07 9.75981e+06 0.00443104 1.44971e+07 49.9795 0.0122153 0.99172 0 50.2501 GTEX-16XZZ-0126-SM-793DV 1 C1 6 pieces; excessive subcutaneous fat included in sample; makes up 50% of area 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 440 765 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992766 398942 0.97691 0.993878 0.760097 24347 1 76 0.00298046 302 0 1.13562e+08 0.0227832 812543 1.14262e+08 1.49237e+07 24395 5.65655e+07 0 0.216813 0.993878 0.755444 1.13562e+08 0.00347295 2.51566e+07 1.16481e+07 2.51973e+07 327 2.52805e+07 1.87435e+07 0.00322643 2.5197e+07 49.9173 0.00711125 0.994991 0 50.0404 GTEX-16XZZ-0226-SM-7MGVJ 1 C1 2 pieces; 5% fibrous content 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 442 763 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991802 85015 0.97926 0.993724 0.81303 20685 1 76 0.00262768 124 0 5.68285e+07 0.0204077 1.07452e+06 5.71874e+07 4.54092e+06 20701 2.82999e+07 0 0.16623 0.993724 0.807928 5.68285e+07 0.00342836 1.25661e+07 6.11394e+06 1.26865e+07 146 1.26767e+07 8.16259e+06 0.00302724 1.26772e+07 50.0009 0.0187894 0.995645 0 50.2384 GTEX-16XZZ-0326-SM-7EWD6 1 C1 2 pieces; 10% peripheral fat in 1 piece 6.3 Nerve Nerve - Tibial 0001323 453 752 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990946 134844 0.965441 0.992877 0.713354 23209 1 76 0.0024067 141 0 6.36939e+07 0.0343016 225777 6.41509e+07 5.48282e+06 23247 3.16916e+07 0 0.252086 0.992877 0.708273 6.36939e+07 0.0035519 1.39985e+07 6.29566e+06 1.4065e+07 140 1.40761e+07 9.2212e+06 0.00297818 1.41015e+07 50.0451 0.00351947 0.994808 0 50.1186 GTEX-16XZZ-0426-SM-793BW 1 C1 2 pieces; focal intimal plaque on 1; small (0.1 mm) medial calcium deposit in each; well trimmed 7.7 Blood Vessel Artery - Tibial 0007610 454 752 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992802 183985 0.977232 0.994252 0.850863 20255 1 76 0.00280271 135 0 6.62915e+07 0.022407 223123 6.66748e+07 9.52967e+06 20267 3.30279e+07 0 0.126369 0.994252 0.845972 6.62915e+07 0.00360423 1.42772e+07 5.39718e+06 1.43328e+07 150 1.43314e+07 1.3833e+07 0.00320289 1.43743e+07 50.0747 0.00334644 0.995701 0 50.0971 GTEX-16XZZ-0526-SM-7KUF1 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 463 744 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.984057 546311 0.982488 0.990095 0.874724 21465 1 76 0.00262704 386 0 1.18508e+08 0.0172748 1.51200e+06 1.19694e+08 1.05547e+07 21478 5.87406e+07 0 0.107763 0.990095 0.86606 1.18508e+08 0.00346826 2.61926e+07 1.37081e+07 2.62338e+07 334 2.65644e+07 2.27125e+07 0.00304508 2.65121e+07 49.9508 0.0126323 0.996134 0 50.0393 GTEX-16XZZ-0526-SM-CYKUB-ELUATE 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 463 744 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16XZZ-0526-SM-CYKUB-INPUT 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 463 744 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16XZZ-0526-SM-CYKUB-SUP 1 C1 2 pieces 7.8 Muscle Muscle - Skeletal 0011907 463 744 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 RIP-Seq GTEX-16XZZ-0626-SM-6M47T 1 C1 2 pieces; spermatogenesis 7 Testis Testis 0000473 475 732 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.991678 200461 0.93335 0.993176 0.721921 32290 1 76 0.00246885 148 0 7.4859e+07 0.0663401 1.17536e+06 7.53734e+07 1.01167e+07 32351 3.73043e+07 0 0.211428 0.993176 0.716994 7.4859e+07 0.00343301 1.57193e+07 1.13585e+07 1.57277e+07 159 1.57427e+07 1.08795e+07 0.0029502 1.58053e+07 50.0993 0.0155938 0.994674 0 50.0133 GTEX-16XZZ-0726-SM-7KUF2 1 C1 6 pieces; well trimmed; 5-10% dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 477 731 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986499 240590 0.975472 0.990186 0.747814 23481 1 76 0.00337888 140 0 6.94496e+07 0.0242829 697466 7.0138e+07 6.65188e+06 23508 3.44755e+07 0 0.227658 0.990186 0.740475 6.94496e+07 0.00339913 1.53159e+07 7.00229e+06 1.55323e+07 150 1.56464e+07 1.06526e+07 0.00338897 1.54465e+07 49.6785 0.0099442 0.993873 0 50.3507 GTEX-16XZZ-0826-SM-7IGM3 1 C1 2 pieces 6.2 Thyroid Thyroid 0002046 481 727 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993612 520335 0.965197 0.994482 0.734061 24842 1 76 0.0021396 274 0 1.10129e+08 0.0345359 256808 1.1074e+08 7.29992e+06 24901 5.48634e+07 0 0.231135 0.994482 0.730011 1.10129e+08 0.00274124 2.40581e+07 1.21488e+07 2.42333e+07 323 2.4227e+07 1.62426e+07 0.00244015 2.41648e+07 49.9357 0.00231902 0.995353 0 50.1814 GTEX-16XZZ-0926-SM-7DHLI 1 C1 2 pieces; foci of pigmented macrophages 8.2 Lung Lung 0008952 483 726 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.9892 181793 0.97374 0.990502 0.764643 24392 1 76 0.00413082 202 0 9.39646e+07 0.0248021 376524 9.48656e+07 7.5344e+06 24437 4.66998e+07 0 0.209097 0.990502 0.75738 9.39646e+07 0.00577848 2.09179e+07 1.00576e+07 2.10793e+07 233 2.11269e+07 1.5231e+07 0.00495357 2.09834e+07 49.8296 0.00396903 0.991804 0 50.1922 GTEX-16XZZ-0926-SM-CYKP1 1 C1 2 pieces; foci of pigmented macrophages 8.2 Lung Lung 0008952 483 726 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 RIP-Seq GTEX-16XZZ-1026-SM-7DHKS 1 C1 2 pieces; 10% adipose in 1; 30% fibrous content in other 8.3 Heart Heart - Atrial Appendage 0006631 485 725 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991428 153177 0.981102 0.992685 0.811236 21709 1 76 0.00338646 129 0 6.87605e+07 0.0183743 925034 6.92672e+07 5.26575e+06 21730 3.42265e+07 0 0.169866 0.992685 0.805302 6.87605e+07 0.00499044 1.50191e+07 6.72231e+06 1.5144e+07 155 1.51742e+07 1.18353e+07 0.00418743 1.50631e+07 49.8162 0.0133546 0.993942 0 50.2071 GTEX-16XZZ-1126-SM-CYKSR 1 C1 2 pieces 6.2 Heart Heart - Left Ventricle 0006566 486 724 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 RIP-Seq GTEX-16XZZ-1426-SM-7KUE3 1 C1 6 pieces; well dissected; thin flat plaques 6.3 Blood Vessel Artery - Aorta 0001496 493 719 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.989549 263933 0.976392 0.992507 0.824788 22374 1 76 0.00304122 205 0 9.22939e+07 0.0231922 240347 9.29907e+07 7.84208e+06 22393 4.58557e+07 0 0.151604 0.992507 0.818608 9.22939e+07 0.00339128 1.96219e+07 8.53917e+06 1.98762e+07 253 1.99562e+07 1.85324e+07 0.00321573 1.98007e+07 49.8045 0.00258464 0.995465 0 50.3219 GTEX-16XZZ-1626-SM-7KUEC 1 C1 2 pieces; minimal fibrous content 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 496 717 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988221 355924 0.981184 0.99125 0.817797 21843 1 76 0.00321637 164 0 7.97182e+07 0.0185133 837615 8.04219e+07 6.8735e+06 21861 3.96183e+07 0 0.163387 0.99125 0.810641 7.97182e+07 0.00299269 1.75022e+07 8.78404e+06 1.77192e+07 195 1.78302e+07 1.45123e+07 0.00310487 1.76237e+07 49.7088 0.0104153 0.994279 0 50.3081 GTEX-16XZZ-1726-SM-7KULD 1 C1 6 pieces; 20% fat on 1 of 6 pieces 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 497 717 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989754 286860 0.970914 0.9918 0.764782 23768 1 76 0.00346598 202 0 8.99377e+07 0.0288612 973396 9.06813e+07 6.81068e+06 23803 4.47368e+07 0 0.206132 0.9918 0.758511 8.99377e+07 0.00436585 1.96131e+07 7.699e+06 1.98143e+07 216 1.98663e+07 1.3104e+07 0.00391499 1.97415e+07 49.8425 0.0107343 0.993846 0 50.2552 GTEX-16XZZ-2326-SM-6LPJK 2 C1 2 pieces; larger piece has 50% external vascular & fatty content 6 Adrenal Gland Adrenal Gland 0002369 506 713 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 EXCLUDE 0.988324 279977 0.962641 0.990851 0.80553 21835 1 76 0.00255206 132 0 6.17943e+07 0.0371512 3.81569e+06 6.23649e+07 9.70566e+06 21848 3.07551e+07 0 0.157111 0.990851 0.798161 6.17943e+07 0.00346686 1.34952e+07 1.61362e+07 1.36027e+07 160 1.35637e+07 8.45405e+06 0.00300829 1.36804e+07 50.2141 0.0611833 0.993379 0 50.1983 GTEX-16XZZ-2426-SM-7KULN 2 C1 2 pieces; glands autolyzed [3], stroma intact [1] 7 Prostate Prostate 0002367 508 711 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989247 223445 0.970013 0.991277 0.782757 25006 1 76 0.00365831 168 0 8.15803e+07 0.0296727 1.07193e+06 8.22982e+07 6.65623e+06 25030 4.057e+07 0 0.187257 0.991277 0.775929 8.15803e+07 0.00443144 1.78585e+07 8.33522e+06 1.80541e+07 185 1.80814e+07 1.35535e+07 0.00404409 1.8001e+07 49.8885 0.013025 0.993307 0 50.2723 GTEX-16XZZ-2626-SM-6M47S 3 C1 6 pieces; mucosa autolyzed [3], muscle intact [1] 7 Colon Colon - Transverse 0001157 513 707 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.988538 119128 0.968086 0.99032 0.744727 23096 1 76 0.00327324 115 0 5.55512e+07 0.0291757 429756 5.60942e+07 7.18913e+06 23125 2.75786e+07 0 0.223359 0.99032 0.737518 5.55512e+07 0.00440898 1.22893e+07 7.21771e+06 1.22733e+07 127 1.22831e+07 7.6685e+06 0.00384009 1.23747e+07 50.1856 0.00766133 0.992102 0 49.9673 GTEX-16XZZ-2726-SM-7EWDO 1 C1 6 pieces 6.4 Colon Colon - Sigmoid 0001159 516 708 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991284 110774 0.972258 0.993082 0.786763 21613 1 76 0.00237901 121 0 5.55137e+07 0.0274899 604811 5.59004e+07 4.61796e+06 21631 2.76295e+07 0 0.185495 0.993082 0.78132 5.55137e+07 0.00350939 1.20812e+07 6.04994e+06 1.21826e+07 137 1.21821e+07 8.16345e+06 0.00294318 1.21772e+07 49.99 0.0108194 0.994879 0 50.209 GTEX-16XZZ-2926-SM-6LPK4 1 C1 4 pieces 6.6 Brain Brain - Cerebellum 0002037 520 707 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991695 484169 0.943615 0.993898 0.767557 22803 1 76 0.002512 194 0 7.38986e+07 0.0561418 3.13528e+06 7.43523e+07 1.19209e+07 22827 3.67985e+07 0 0.176059 0.993898 0.762874 7.38986e+07 0.0034055 1.59633e+07 2.81467e+07 1.61036e+07 244 1.60113e+07 6.28592e+06 0.00295776 1.62023e+07 50.2965 0.042168 0.996102 0 50.2188 GTEX-16XZZ-3026-SM-79OMJ 1 C1 pieces 6.5 Brain Brain - Cortex 0001870 522 705 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993355 489790 0.95387 0.993821 0.812905 23608 1 76 0.0028424 196 0 7.65167e+07 0.0457875 2.68984e+06 7.69924e+07 4.22535e+06 23625 3.81326e+07 0 0.140965 0.993821 0.807882 7.65167e+07 0.004008 1.66686e+07 2.05846e+07 1.6913e+07 255 1.6852e+07 8.84348e+06 0.00342493 1.67598e+07 49.8629 0.0349364 0.994288 0 50.3639 GTEX-16XZZ-3026-SM-CYKT9 1 C1 pieces 6.5 Brain Brain - Cortex 0001870 522 705 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 RIP-Seq GTEX-16XZZ-3126-SM-7EPGJ 1 C1 2 pieces; anterior and posterior parts are separated and in equal proportions 6.9 Pituitary Pituitary 0000007 523 705 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990292 472895 0.954855 0.992601 0.743425 25062 1 76 0.00307989 131 0 9.35942e+07 0.0448725 452338 9.42919e+07 1.19549e+07 25104 4.66232e+07 0 0.21143 0.992601 0.737924 9.35942e+07 0.0115264 2.0035e+07 2.9731e+07 2.03804e+07 153 2.04491e+07 1.35207e+07 0.00729333 2.01744e+07 49.662 0.00479721 0.99491 0 50.4274 GTEX-16YQH-0004-SM-6RBKA C1 Blood Whole Blood 0013756 792 BP-50506 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-16YQH-0004-SM-6UH22 C1 Blood Whole Blood 0013756 792 BP-50506 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/14/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-16YQH-0006-SM-7P8OQ C1 8 Blood Whole Blood 0013756 792 BP-50507 RNA isolation_PAXgene Blood RNA (Manual) 03/14/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.975026 369511 0.981854 0.976782 0.79756 20137 1 76 0.003165 203 0 1.06869e+08 0.016914 548154 1.09409e+08 1.57763e+07 20156 5.31479e+07 0 0.184294 0.976782 0.779042 1.06869e+08 0.00403848 2.44282e+07 1.0406e+08 2.47191e+07 244 2.47217e+07 2.46132e+07 0.00360096 2.46159e+07 49.8928 0.00501014 0.978538 0 50.296 GTEX-16YQH-0008-SM-EAZB8 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 905 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993688 466264 0.981299 0.994499 0.859572 21410 1 76 0.00172178 287 0 1.12567e+08 0.0183515 388600 1.1319e+08 7.98519e+06 21434 5.61295e+07 0 0.121728 0.994499 0.854843 1.12567e+08 0.00255066 2.53066e+07 1.20331e+07 2.54149e+07 285 2.54096e+07 3.01273e+07 0.00213588 2.54038e+07 49.9943 0.00343317 0.99531 0 50.1068 GTEX-16YQH-0011-R10a-SM-AHZMD C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 814 ChIP-Seq GTEX-16YQH-0011-R10b-SM-7LT8U C1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 814 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988292 849204 0.958421 0.992022 0.840061 24818 1 76 0.00289512 271 0 1.09776e+08 0.0410824 4.98096e+06 1.10658e+08 1.17457e+07 24840 5.45268e+07 0 0.118359 0.992022 0.833359 1.09776e+08 0.00407384 2.38857e+07 2.81447e+07 2.39897e+07 305 2.41364e+07 1.31448e+07 0.00348226 2.40994e+07 49.9617 0.045012 0.995751 0 50.1087 GTEX-16YQH-0011-R10b-SM-CYKU8 C1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 814 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 RIP-Seq GTEX-16YQH-0011-R11b-SM-7LT98 C1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 814 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987572 692461 0.948767 0.991045 0.764984 24683 1 76 0.00287499 274 0 1.07248e+08 0.0507473 1.35012e+06 1.08218e+08 1.17045e+07 24717 5.32613e+07 0 0.183783 0.991045 0.758134 1.07248e+08 0.00395584 2.30143e+07 1.73026e+07 2.32006e+07 275 2.3385e+07 1.43347e+07 0.00341352 2.31726e+07 49.7719 0.012476 0.994518 0 50.2016 GTEX-16YQH-0011-R1a-SM-7LT8R C1, A1 7.8 Brain Brain - Hippocampus 0001954 814 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.9894 961786 0.950032 0.992603 0.835775 24500 1 76 0.00283587 274 0 1.00564e+08 0.0494263 4.83534e+06 1.01314e+08 9.58804e+06 24516 4.99884e+07 0 0.114257 0.992603 0.829594 1.00564e+08 0.00367084 2.1717e+07 3.48691e+07 2.19247e+07 291 2.19981e+07 1.25626e+07 0.00325201 2.19369e+07 49.9304 0.0477264 0.995806 0 50.238 GTEX-16YQH-0011-R3a-SM-7EPGM C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 814 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991678 1.03335e+06 0.954577 0.994026 0.873398 22864 1 76 0.00311846 160 0 9.74561e+07 0.0447607 4.60931e+06 9.80418e+07 1.29833e+07 22876 4.85329e+07 0 0.0811792 0.994026 0.86818 9.74561e+07 0.0115583 2.10015e+07 3.47707e+07 2.15008e+07 199 2.14665e+07 1.45827e+07 0.00732842 2.12474e+07 49.7436 0.0470137 0.996373 0 50.5874 GTEX-16YQH-0011-R4a-SM-7EPGI C1, A1 6.8 Brain Brain - Amygdala 0001876 814 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990456 1.12021e+06 0.949398 0.992707 0.868586 22617 1 76 0.00304042 149 0 8.71571e+07 0.0499012 3.22669e+06 8.77974e+07 1.19858e+07 22627 4.3369e+07 0 0.080812 0.992707 0.862252 8.71571e+07 0.0116204 1.87688e+07 3.35738e+07 1.90348e+07 178 1.90372e+07 1.38702e+07 0.00732068 1.89591e+07 49.8971 0.0367515 0.994958 0 50.3518 GTEX-16YQH-0011-R5b-SM-7938U C1, A1 9.3 Brain Brain - Caudate (basal ganglia) 0001873 814 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993252 1.19076e+06 0.944857 0.994356 0.866387 21891 1 76 0.00215788 147 0 6.12062e+07 0.0544876 1.75036e+06 6.15536e+07 4.79751e+06 21903 3.04254e+07 0 0.0784695 0.994356 0.861497 6.12062e+07 0.00287529 1.32532e+07 2.3331e+07 1.32214e+07 169 1.33356e+07 9.5562e+06 0.00251618 1.32391e+07 49.8183 0.0284363 0.995459 0 49.9401 GTEX-16YQH-0011-R6b-SM-7938T C1, A1 8.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 814 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995118 595845 0.953174 0.995818 0.836134 22836 1 76 0.00196706 122 0 5.40475e+07 0.0459762 1.55436e+06 5.42745e+07 2.26209e+06 22852 2.69194e+07 0 0.11704 0.995818 0.832637 5.40475e+07 0.00233303 1.18052e+07 1.18929e+07 1.17719e+07 139 1.18385e+07 8.37768e+06 0.00214992 1.17818e+07 49.88 0.0286389 0.996518 0 49.9293 GTEX-16YQH-0011-R7a-SM-79ON1 C1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 814 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99432 727210 0.946949 0.994341 0.866229 21085 1 76 0.00306742 132 0 5.67622e+07 0.05255 2.27999e+06 5.70853e+07 3.25878e+06 21093 2.82775e+07 0 0.0807193 0.994341 0.861327 5.67622e+07 0.00431154 1.22601e+07 2.08154e+07 1.24288e+07 154 1.2391e+07 7.57918e+06 0.00368946 1.23127e+07 49.8415 0.03994 0.994361 0 50.3418 GTEX-16YQH-0011-R8a-SM-7DUFB C1, A1 7.5 Brain Brain - Hypothalamus 0001898 814 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992242 1.57357e+06 0.948196 0.992788 0.842938 24749 1 76 0.00279298 273 0 9.73682e+07 0.0511331 2.16666e+06 9.80755e+07 8.91313e+06 24768 4.84003e+07 0 0.105259 0.992788 0.836858 9.73682e+07 0.00413593 2.11973e+07 3.15398e+07 2.12873e+07 320 2.1405e+07 1.51613e+07 0.00346408 2.11623e+07 49.7149 0.0220917 0.993334 0 50.106 GTEX-16YQH-0126-SM-7DUFJ 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 904 1052 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.99182 298766 0.973449 0.992703 0.770868 24111 1 76 0.00288822 238 0 9.17812e+07 0.0262734 517889 9.24558e+07 8.47842e+06 24147 4.57019e+07 0 0.202581 0.992703 0.765243 9.17812e+07 0.00434042 2.01992e+07 9.76482e+06 2.02707e+07 212 2.03395e+07 1.54083e+07 0.00361368 2.02117e+07 49.8425 0.00560147 0.993586 0 50.0883 GTEX-16YQH-0226-SM-6PALD 0 C1 2 pieces, trace fascia, ~10%, rep. delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 906 1051 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.977557 239138 0.974062 0.986028 0.793469 24286 1 76 0.00341274 280 0 1.04343e+08 0.0256288 496304 1.05822e+08 1.15356e+07 24324 5.15489e+07 0 0.180593 0.986028 0.782383 1.04343e+08 0.00608558 2.29364e+07 1.00587e+07 2.28226e+07 276 2.32249e+07 1.67284e+07 0.00473768 2.33974e+07 50.185 0.00469001 0.994499 0 49.8756 GTEX-16YQH-0326-SM-6LPJV 1 C1 2 pieces, no abnormalities 7 Thyroid Thyroid 0002046 908 1049 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990465 169685 0.968322 0.992742 0.778265 23220 1 76 0.00277959 121 0 6.01452e+07 0.0313578 250171 6.05849e+07 9.19644e+06 23246 2.99441e+07 0 0.190057 0.992742 0.772616 6.01452e+07 0.00365831 1.31921e+07 6.95419e+06 1.32002e+07 130 1.32206e+07 1.04342e+07 0.00321794 1.32998e+07 50.1493 0.00412926 0.995019 0 50.0154 GTEX-16YQH-0426-SM-7KUL7 0 C1 2 pieces, ~10% interstitial fat/vascular elements, rep delineated 8.5 Muscle Muscle - Skeletal 0011907 921 1036 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.993431 344676 0.982771 0.994887 0.877077 20635 1 76 0.00325766 270 0 9.63985e+07 0.016926 1.15291e+06 9.68939e+07 6.74304e+06 20646 4.80243e+07 0 0.105694 0.994887 0.872593 9.63985e+07 0.00392856 2.09459e+07 1.14231e+07 2.12342e+07 273 2.13166e+07 2.08263e+07 0.00359261 2.09856e+07 49.6088 0.0118987 0.996344 0 50.3417 GTEX-16YQH-0426-SM-CYKTD 0 C1 2 pieces, ~10% interstitial fat/vascular elements, rep delineated 8.5 Muscle Muscle - Skeletal 0011907 921 1036 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 RIP-Seq GTEX-16YQH-0526-SM-7KUE8 0 C1 2 pieces, nubbin of adherent fat, up to ~0.8mm, delineated 7.2 Nerve Nerve - Tibial 0001323 930 1028 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.988445 310347 0.964682 0.991029 0.765813 24773 1 76 0.0031222 176 0 8.52082e+07 0.0350066 296052 8.59796e+07 7.24769e+06 24812 4.23673e+07 0 0.198869 0.991029 0.758943 8.52082e+07 0.00348798 1.85452e+07 7.89794e+06 1.87362e+07 198 1.8841e+07 1.40431e+07 0.00330461 1.86482e+07 49.7428 0.00344328 0.993612 0 50.2561 GTEX-16YQH-0626-SM-7938I 0 C1 2 pieces, no atherosis, no adherent fat, excellent specimen 10 Blood Vessel Artery - Tibial 0007610 931 1027 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992474 227353 0.974489 0.993363 0.820054 21052 1 76 0.00226064 134 0 6.09754e+07 0.0251834 364220 6.13828e+07 5.09551e+06 21074 3.03271e+07 0 0.154435 0.993363 0.814611 6.09754e+07 0.00296399 1.30686e+07 4.84714e+06 1.30896e+07 149 1.31304e+07 1.11245e+07 0.002612 1.30811e+07 49.9059 0.00593358 0.994251 0 50.0401 GTEX-16YQH-0726-SM-7IGM1 1 C1 2 pieces, no abnormalities 6.1 Heart Heart - Atrial Appendage 0006631 939 1020 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994565 397495 0.976561 0.995513 0.823855 22990 1 76 0.00230027 199 0 8.32644e+07 0.022986 1.84276e+06 8.36397e+07 5.53969e+06 23016 4.14945e+07 0 0.152706 0.995513 0.820158 8.32644e+07 0.00286581 1.81037e+07 9.52717e+06 1.85018e+07 237 1.84611e+07 1.30316e+07 0.00258277 1.82064e+07 49.6526 0.0220321 0.99646 0 50.5438 GTEX-16YQH-0826-SM-7938J 1 C1 2 pieces, nubbin of adherent fat up to ~1mm, delineated; focal atherosis, ~20% occlusion, delineated 10 Blood Vessel Artery - Coronary 0001621 943 1016 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992581 196525 0.97436 0.99364 0.82717 20641 1 76 0.00218532 138 0 6.19394e+07 0.0252526 276835 6.23359e+07 4.7228e+06 20653 3.0819e+07 0 0.14719 0.99364 0.821909 6.19394e+07 0.00282831 1.3191e+07 4.29007e+06 1.32178e+07 149 1.32293e+07 1.20169e+07 0.00250647 1.32447e+07 50.029 0.00444102 0.994698 0 50.0508 GTEX-16YQH-0926-SM-793BC 1 C1 2 pieces, no significant chronic ischemic changes 7.8 Heart Heart - Left Ventricle 0006566 944 1015 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995098 227395 0.981004 0.99623 0.831053 21288 1 76 0.00312455 190 0 7.95777e+07 0.018802 3.72168e+06 7.98788e+07 1.15594e+07 21310 3.96714e+07 0 0.14995 0.99623 0.82792 7.95777e+07 0.00368126 1.76742e+07 9.82744e+06 1.77967e+07 209 1.78261e+07 1.12644e+07 0.00340259 1.7729e+07 49.8635 0.0465916 0.997362 0 50.1727 GTEX-16YQH-0926-SM-CYKU2 1 C1 2 pieces, no significant chronic ischemic changes 7.8 Heart Heart - Left Ventricle 0006566 944 1015 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 RIP-Seq GTEX-16YQH-1826-SM-6LPJW 1 C1 2 pieces, spermatogenesis is present 7 Testis Testis 0000473 1007 959 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990368 230648 0.924779 0.992546 0.721468 31819 1 76 0.00271002 121 0 6.01666e+07 0.0748872 460657 6.06185e+07 9.12289e+06 31872 2.99604e+07 0 0.203312 0.992546 0.71609 6.01666e+07 0.00359459 1.24933e+07 8.49291e+06 1.2457e+07 116 1.24957e+07 1.0316e+07 0.00315133 1.25695e+07 50.1474 0.00759928 0.994724 0 49.9272 GTEX-16YQH-1926-SM-6M47L 2 C1 6 pieces, mucosa largely sloughed; hemorrhagic stroma. Submucosal mucus glands intact; rep delineated 6.5 Esophagus Esophagus - Mucosa 0006920 1008 958 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.993289 128959 0.971866 0.994944 0.787874 23011 1 76 0.0026292 158 0 5.78853e+07 0.0278309 840129 5.81794e+07 8.1452e+06 23027 2.88303e+07 0 0.183992 0.994944 0.78389 5.78853e+07 0.00375408 1.28872e+07 6.58796e+06 1.29009e+07 149 1.28749e+07 8.2449e+06 0.0031907 1.3009e+07 50.2589 0.0144403 0.996599 0 50.0266 GTEX-16YQH-2226-SM-7IGM2 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50-60 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1013 955 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994601 417607 0.976598 0.995238 0.844309 24029 1 76 0.0021702 382 0 1.02937e+08 0.0231351 491409 1.0343e+08 6.62635e+06 24060 5.12982e+07 0 0.132289 0.995238 0.840288 1.02937e+08 0.00272456 2.26156e+07 1.21667e+07 2.2849e+07 342 2.27848e+07 1.92698e+07 0.0024472 2.27542e+07 49.9664 0.00475113 0.995875 0 50.2568 GTEX-16YQH-2326-SM-7EWDS 1 C1 2 pieces, glandular elements approaching score '2' in some foci but resaonably well preserved 6.3 Prostate Prostate 0002367 1015 953 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99047 194019 0.964008 0.992429 0.754111 23354 1 76 0.0026377 131 0 6.21729e+07 0.0356762 1.16429e+06 6.26471e+07 5.54356e+06 23378 3.09181e+07 0 0.209896 0.992429 0.748402 6.21729e+07 0.00390352 1.37701e+07 7.52533e+06 1.38359e+07 151 1.38474e+07 7.38789e+06 0.00326936 1.38759e+07 50.0513 0.0185849 0.994388 0 50.1191 GTEX-16YQH-2826-SM-6PAMY 1 C1 2 pieces, fibroadipose elements only 6.1 Breast Breast - Mammary Tissue 0008367 1033 938 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978863 250612 0.973242 0.986899 0.818649 24362 1 76 0.00344358 374 0 1.10844e+08 0.0265021 896093 1.12315e+08 1.3123e+07 24403 5.48049e+07 0 0.154593 0.986899 0.807924 1.10844e+08 0.00602742 2.42139e+07 1.15647e+07 2.4311e+07 354 2.46566e+07 1.51751e+07 0.00472498 2.47236e+07 50.0678 0.00797837 0.994936 0 50.1 GTEX-16YQH-2926-SM-6LPJE 1 C1 2 pieces, no abnormalities 6 Brain Brain - Cerebellum 0002037 1055 916 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.989501 336397 0.939513 0.991697 0.695421 23208 1 76 0.00305963 110 0 6.25106e+07 0.0601394 744981 6.30339e+07 1.00901e+07 23234 3.11003e+07 0 0.244093 0.991697 0.689647 6.25106e+07 0.00391453 1.3451e+07 1.59574e+07 1.34573e+07 131 1.34704e+07 7.28642e+06 0.00348613 1.35646e+07 50.1743 0.0118187 0.993893 0 50.0118 GTEX-16YQH-3026-SM-79OMM 1 C1 2 pieces, no abnormalities 6.7 Brain Brain - Cortex 0001870 1057 916 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994149 197049 0.964896 0.994495 0.834757 22670 1 76 0.00328965 121 0 6.01262e+07 0.0346589 2.14398e+06 6.04591e+07 3.42887e+06 22686 2.9964e+07 0 0.130139 0.994495 0.830161 6.01262e+07 0.00450592 1.32076e+07 1.0057e+07 1.34166e+07 160 1.33399e+07 6.82252e+06 0.00389758 1.32904e+07 49.9071 0.0354616 0.994841 0 50.3926 GTEX-16YQH-3126-SM-79OJZ 1 C1 1 piece, ~20% neurohypophysis, delineated; rest is adenohypophysis; focal dural elements/bone (ensquared) 7.1 Pituitary Pituitary 0000007 1057 916 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.97726 343439 0.957937 0.981031 0.735568 24856 1 76 0.00542468 115 0 6.80037e+07 0.0417833 246071 6.93186e+07 1.59723e+07 24889 3.38241e+07 0 0.222369 0.981031 0.721615 6.80037e+07 0.00655469 1.43671e+07 1.09127e+07 1.44662e+07 135 1.45781e+07 9.95437e+06 0.00598751 1.44936e+07 49.8546 0.00354986 0.984802 0 50.1718 GTEX-16Z82-0004-SM-6UH1S C1 Blood Whole Blood 0013756 448 BP-50506 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/14/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-16Z82-0005-SM-7PBXZ C1 8.3 Blood Whole Blood 0013756 448 BP-50507 RNA isolation_PAXgene Blood RNA (Manual) 03/14/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.981662 492038 0.974249 0.985181 0.798724 20913 1 76 0.00312431 203 0 1.06608e+08 0.0244869 412120 1.08212e+08 1.38105e+07 20926 5.29554e+07 0 0.175525 0.985181 0.786888 1.06608e+08 0.00563179 2.42001e+07 9.36533e+07 2.43815e+07 211 2.4452e+07 2.40531e+07 0.00437357 2.45126e+07 50.0618 0.00380847 0.988701 0 50.1868 GTEX-16Z82-0008-SM-EAZBX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 519 BP-50457 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992631 521995 0.973558 0.993625 0.849349 20308 1 76 0.00167581 235 0 9.85323e+07 0.0261002 176721 9.91645e+07 7.25335e+06 20324 4.91222e+07 0 0.124209 0.993625 0.843933 9.85323e+07 0.0026726 2.19839e+07 1.83487e+07 2.2185e+07 238 2.22015e+07 2.61986e+07 0.00217371 2.20626e+07 49.8431 0.0017821 0.994618 0 50.2276 GTEX-16Z82-0011-R10a-SM-79OJX C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 460 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.980078 476278 0.957618 0.98384 0.829694 22706 1 76 0.00495226 126 0 5.78669e+07 0.0420405 3.42073e+06 5.88174e+07 1.31347e+07 22715 2.87924e+07 0 0.127924 0.98384 0.816286 5.78669e+07 0.00619961 1.24389e+07 1.96408e+07 1.26792e+07 154 1.26938e+07 5.82472e+06 0.00557355 1.26131e+07 49.8406 0.0581584 0.987602 0 50.4785 GTEX-16Z82-0011-R10a-SM-AHZME C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 460 ChIP-Seq GTEX-16Z82-0011-R10a-SM-CYKT5 C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 460 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 RIP-Seq GTEX-16Z82-0011-R11a-SM-79OKJ C1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 460 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976857 592796 0.945305 0.980874 0.827309 21021 1 76 0.00506366 124 0 5.53984e+07 0.0544152 3.62702e+06 5.64786e+07 1.31588e+07 21029 2.75593e+07 0 0.117996 0.980874 0.811486 5.53984e+07 0.00639056 1.17884e+07 2.51218e+07 1.20243e+07 151 1.20352e+07 5.2993e+06 0.00572439 1.19817e+07 49.8887 0.0642193 0.984891 0 50.4953 GTEX-16Z82-0011-R1b-SM-7EPHZ C1, A1 6.9 Brain Brain - Hippocampus 0001954 460 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991029 601232 0.955672 0.993535 0.819583 23902 1 76 0.00302325 182 0 9.16316e+07 0.044038 7.51186e+06 9.22278e+07 1.20849e+07 23923 4.56325e+07 0 0.136089 0.993535 0.814284 9.16316e+07 0.0112799 1.95511e+07 3.3359e+07 2.03764e+07 203 2.02269e+07 7.99553e+06 0.00714116 1.98886e+07 49.5783 0.081449 0.996042 0 51.0335 GTEX-16Z82-0011-R2b-SM-79OK9 C1, A1 7.1 Brain Brain - Substantia nigra 0002038 460 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.977047 303781 0.962657 0.981255 0.82962 23072 1 76 0.00478931 161 0 6.31365e+07 0.0371098 5.42941e+06 6.43427e+07 1.4722e+07 23086 3.13857e+07 0 0.133037 0.981255 0.814069 6.31365e+07 0.00630548 1.37432e+07 1.34952e+07 1.41281e+07 179 1.40696e+07 6.05526e+06 0.00554415 1.40342e+07 49.9369 0.0843828 0.985462 0 50.6905 GTEX-16Z82-0011-R5a-SM-7EPGB C1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 460 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990311 1.00356e+06 0.953323 0.992506 0.800795 23147 1 76 0.00282039 266 0 1.08528e+08 0.0464715 8.50886e+06 1.09347e+08 1.36985e+07 23165 5.40955e+07 0 0.152528 0.992506 0.794794 1.08528e+08 0.0111259 2.26085e+07 7.42724e+07 2.35179e+07 301 2.32067e+07 7.49369e+06 0.00696398 2.31006e+07 49.8855 0.0778151 0.9947 0 50.9858 GTEX-16Z82-0011-R6a-SM-7IGLV C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 460 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994526 219443 0.972369 0.995615 0.845772 20983 1 76 0.00180922 195 0 5.95985e+07 0.0274881 6.31197e+06 5.9861e+07 3.67209e+06 20991 2.97213e+07 0 0.126596 0.995615 0.842064 5.95985e+07 0.00260996 1.27835e+07 2.21839e+07 1.33958e+07 218 1.31328e+07 3.90701e+06 0.00220915 1.30828e+07 49.9046 0.105444 0.996704 0 51.1694 GTEX-16Z82-0011-R7a-SM-7MKGJ C1, A1 6.9 Brain Brain - Putamen (basal ganglia) 0001874 460 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985524 578930 0.956958 0.990052 0.827376 23873 1 76 0.00403689 266 0 9.10914e+07 0.0428586 8.23239e+06 9.20066e+07 1.41401e+07 23887 4.51847e+07 0 0.129582 0.990052 0.819145 9.10914e+07 0.0045265 1.96447e+07 3.14812e+07 1.97681e+07 294 1.9827e+07 7.07959e+06 0.00428058 1.99248e+07 50.123 0.0894761 0.994581 0 50.1565 GTEX-16Z82-0011-R8a-SM-7DUEX C1, A1 7.5 Brain Brain - Hypothalamus 0001898 460 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992704 663677 0.957834 0.993571 0.821694 25723 1 76 0.00267622 376 0 1.04741e+08 0.0417894 4.48056e+06 1.05418e+08 8.77521e+06 25753 5.21772e+07 0 0.13614 0.993571 0.816411 1.04741e+08 0.00387248 2.28914e+07 2.28954e+07 2.33415e+07 340 2.33192e+07 1.27302e+07 0.00327383 2.30026e+07 49.6583 0.0425027 0.994439 0 50.4868 GTEX-16Z82-0011-R9a-SM-7DUFA C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 460 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992479 529462 0.952471 0.993388 0.795702 23324 1 76 0.0026673 244 0 8.72963e+07 0.0471129 1.79247e+06 8.78773e+07 7.87232e+06 23349 4.34616e+07 0 0.156769 0.993388 0.790441 8.72963e+07 0.00418327 1.92398e+07 1.37176e+07 1.96252e+07 245 1.94464e+07 1.29927e+07 0.00342459 1.94907e+07 50.0568 0.0203974 0.994297 0 50.4958 GTEX-16Z82-0126-SM-7DHLF 1 C1 2 pieces; 10 % internal fat 8.3 Muscle Muscle - Skeletal 0011907 516 1062 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992112 121323 0.981942 0.993343 0.871795 20259 1 76 0.00321598 129 0 6.57833e+07 0.017805 691776 6.62242e+07 4.86641e+06 20270 3.27705e+07 0 0.110147 0.993343 0.865992 6.57833e+07 0.00490332 1.42075e+07 6.15183e+06 1.44156e+07 147 1.44133e+07 1.36278e+07 0.0040586 1.42803e+07 49.7684 0.010446 0.994574 0 50.3635 GTEX-16Z82-0426-SM-7EPGX 2 C1 2 pieces 6.9 Thyroid Thyroid 0002046 522 1058 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.98958 266646 0.964262 0.991926 0.699206 25855 1 76 0.00328248 135 0 9.95222e+07 0.0354156 276012 1.00332e+08 1.30262e+07 25913 4.95357e+07 0 0.265056 0.991926 0.69356 9.95222e+07 0.0118781 2.17356e+07 9.85935e+06 2.18764e+07 154 2.19625e+07 1.40206e+07 0.0075701 2.18672e+07 49.8912 0.00275098 0.994273 0 50.1614 GTEX-16Z82-0426-SM-EZ6Y6 2 C1 2 pieces Thyroid Thyroid 0002046 522 1058 BP-52738 DNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-16Z82-1026-SM-6M48A 2 C1 2 pieces; patchy emphysema, alveolar edema & hemorrhage; partial inclusion of pleura [labeled] 6.7 Lung Lung 0008952 532 1051 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992344 106282 0.973932 0.993899 0.71917 23026 1 76 0.00276486 124 0 6.39893e+07 0.0257112 373661 6.43821e+07 8.57359e+06 23055 3.18683e+07 0 0.254762 0.993899 0.714782 6.39893e+07 0.00373728 1.4227e+07 6.23442e+06 1.42196e+07 141 1.42117e+07 8.74869e+06 0.00325031 1.43323e+07 50.2113 0.00580381 0.995455 0 49.987 GTEX-16Z82-1026-SM-CYKSW 2 C1 2 pieces; patchy emphysema, alveolar edema & hemorrhage; partial inclusion of pleura [labeled] 6.7 Lung Lung 0008952 532 1051 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 RIP-Seq GTEX-16Z82-1726-SM-7MGX3 2 C1 2 pieces; well dissected 5.7 Pancreas Pancreas 0001150 544 1049 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988106 164438 0.982154 0.989942 0.855721 19262 1 76 0.00272541 86 0 6.74401e+07 0.0174527 313109 6.81253e+07 5.55458e+06 19271 3.35962e+07 0 0.126432 0.989942 0.847114 6.74401e+07 0.00348978 1.56219e+07 2.81294e+07 1.58603e+07 100 1.57938e+07 2.12674e+07 0.00310688 1.58108e+07 50.0269 0.00459607 0.991778 0 50.3785 GTEX-16Z82-1926-SM-6M47U 1 C1 6 pieces; well dissected 6.2 Esophagus Esophagus - Mucosa 0006920 549 1045 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.992951 103591 0.97857 0.994622 0.839337 20568 1 76 0.00256069 132 0 5.86049e+07 0.0212099 985868 5.89218e+07 7.74532e+06 20577 2.92086e+07 0 0.139233 0.994622 0.834823 5.86049e+07 0.00375 1.32577e+07 7.23894e+06 1.32958e+07 157 1.32661e+07 8.43813e+06 0.00315435 1.3385e+07 50.2231 0.0167318 0.996293 0 50.0717 GTEX-16Z82-2026-SM-6M48B 1 C1 6 pieces; well dissected 6.2 Esophagus Esophagus - Muscularis 0004648 550 1045 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5861 08/08/2014 TruSeq.v1 RNASEQ 0.993929 73658 0.973442 0.995427 0.809361 21242 1 76 0.00244118 122 0 5.56382e+07 0.0263795 1.29816e+06 5.58938e+07 7.46165e+06 21259 2.773e+07 0 0.164081 0.995427 0.80566 5.56382e+07 0.00348915 1.22862e+07 5.02655e+06 1.22296e+07 152 1.21714e+07 6.32106e+06 0.00296438 1.24219e+07 50.5094 0.0232256 0.996925 0 49.8846 GTEX-16Z82-2226-SM-6LPJ7 2 C1 6 pieces; mucosa autolyzed, muscle intact 5.7 Colon Colon - Transverse 0001157 553 1043 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990346 111949 0.970825 0.992619 0.816445 23093 1 76 0.00293049 121 0 5.63879e+07 0.0280551 700404 5.68072e+07 8.87627e+06 23109 2.80432e+07 0 0.15438 0.992619 0.810419 5.63879e+07 0.00396029 1.23584e+07 6.64436e+06 1.23607e+07 142 1.23331e+07 7.81125e+06 0.00344421 1.25066e+07 50.3491 0.0123295 0.994893 0 50.0047 GTEX-16Z82-2426-SM-7KUMS 1 C1 6 pieces; too much submucosal fat, up to 75% 6.4 Colon Colon - Sigmoid 0001159 558 1039 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989701 261384 0.968508 0.991881 0.796184 24369 1 76 0.00342716 204 0 8.50668e+07 0.0312462 1.47499e+06 8.57631e+07 6.48615e+06 24405 4.23057e+07 0 0.172325 0.991881 0.78972 8.50668e+07 0.00477923 1.85154e+07 8.71331e+06 1.8726e+07 242 1.87677e+07 1.07672e+07 0.00410171 1.8651e+07 49.8441 0.0171984 0.994062 0 50.2827 GTEX-16Z82-2626-SM-7KULU 1 C1 6 pieces; well trimmed; 5% dermal fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 562 1037 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.989608 350488 0.970366 0.991625 0.761988 25874 1 76 0.00347457 281 0 1.03873e+08 0.029386 670283 1.0475e+08 7.54118e+06 25919 5.16618e+07 0 0.208378 0.991625 0.755606 1.03873e+08 0.00464412 2.27139e+07 1.20874e+07 2.2903e+07 287 2.29767e+07 1.55759e+07 0.00405815 2.28418e+07 49.8528 0.00639886 0.993642 0 50.2072 GTEX-16Z82-2726-SM-7KULV 2 C1 2 pieces; spermatogenesis; 3 mm scarred area (labeled); Leydig cell hyperplasia 6.9 Testis Testis 0000473 564 1035 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.990971 418842 0.921128 0.992515 0.709913 34005 1 76 0.00347459 178 0 9.07333e+07 0.0785385 913760 9.14175e+07 6.41519e+06 34077 4.51763e+07 0 0.211216 0.992515 0.704599 9.07333e+07 0.00401022 1.85839e+07 1.43153e+07 1.87508e+07 186 1.88396e+07 1.39093e+07 0.00374199 1.86187e+07 49.7052 0.00999546 0.99406 0 50.2235 GTEX-16Z82-2926-SM-6LPJJ 2 C1 4 fragmented pieces 6 Brain Brain - Cerebellum 0002037 591 1010 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.990851 370347 0.941705 0.993326 0.765044 21815 1 76 0.00267454 124 0 5.58588e+07 0.0581088 2.76093e+06 5.62341e+07 8.20615e+06 21828 2.77961e+07 0 0.176661 0.993326 0.759938 5.58588e+07 0.00379965 1.2054e+07 2.01808e+07 1.20901e+07 159 1.20169e+07 3.67347e+06 0.00323569 1.22548e+07 50.49 0.049097 0.995801 0 50.0748 GTEX-16Z82-3026-SM-79ON3 2 C1 4 pieces 6.7 Brain Brain - Cortex 0001870 593 1008 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994059 313432 0.961023 0.994086 0.828405 23248 1 76 0.00296276 151 0 6.41097e+07 0.0386545 3.18216e+06 6.44911e+07 3.75854e+06 23265 3.19369e+07 0 0.132618 0.994086 0.823506 6.41097e+07 0.00419507 1.4021e+07 1.35863e+07 1.42796e+07 189 1.41927e+07 6.45632e+06 0.0035789 1.41002e+07 49.8366 0.0493427 0.994113 0 50.4568 GTEX-16Z82-3126-SM-7EWEC 2 C1 1 piece; mostly adenohypophysis 6.5 Pituitary Pituitary 0000007 594 1008 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991537 255998 0.957631 0.993496 0.728318 24273 1 76 0.00246019 114 0 5.72833e+07 0.0421391 544622 5.76583e+07 4.5471e+06 24311 2.85132e+07 0 0.229314 0.993496 0.72358 5.72833e+07 0.00367972 1.24572e+07 9.3621e+06 1.2562e+07 135 1.25871e+07 6.77068e+06 0.00306875 1.25389e+07 49.904 0.00944568 0.995454 0 50.2093 GTEX-178AV-0004-SM-6RBJU B1 Blood Whole Blood 0013756 -182 BP-50506 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-178AV-0004-SM-6UH1M B1 Blood Whole Blood 0013756 -182 BP-50506 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/14/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-178AV-0005-SM-9JGFM B1 8.1 Blood Whole Blood 0013756 -182 BP-50507 RNA isolation_PAXgene Blood RNA (Manual) 03/14/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.973175 568938 0.96946 0.974396 0.792764 18626 1 76 0.00191589 111 0 8.39835e+07 0.0296037 223351 8.61903e+07 4.5961e+06 18633 4.18076e+07 0 0.176696 0.974396 0.772466 8.39835e+07 0.00314299 1.9397e+07 1.18775e+08 1.95794e+07 132 1.96089e+07 2.10513e+07 0.00252867 1.94923e+07 49.8508 0.00259137 0.975617 0 50.2341 GTEX-178AV-0008-SM-EAZBY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 257 BP-50491 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99276 659183 0.978708 0.993878 0.858095 20866 1 76 0.00173138 292 0 1.10292e+08 0.0209555 266635 1.10972e+08 8.83777e+06 20883 5.49636e+07 0 0.120613 0.993878 0.852842 1.10292e+08 0.00259433 2.47844e+07 1.52528e+07 2.49104e+07 278 2.49778e+07 2.98162e+07 0.00216237 2.48365e+07 49.8582 0.00240273 0.994996 0 50.1268 GTEX-178AV-0226-SM-793B7 1 B1 2 pieces, abundant Islets, well-preserved, rep encircled 7.6 Pancreas Pancreas 0001150 175 928 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995024 188239 0.978767 0.995999 0.846229 21663 1 76 0.00303641 105 0 8.40376e+07 0.0208856 223064 8.43751e+07 1.23435e+07 21683 4.19092e+07 0 0.132538 0.995999 0.842844 8.40376e+07 0.00341552 1.9366e+07 2.7399e+07 1.95258e+07 127 1.94826e+07 2.58102e+07 0.00322578 1.94872e+07 50.0059 0.00264372 0.996975 0 50.2053 GTEX-178AV-0326-SM-6LPJF 1 B1 2 pieces patchy chronic and acute bronchitis/peribronchial pneumonitis, rep foci ensquared 7.9 Lung Lung 0008952 178 925 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.992238 148687 0.971367 0.994244 0.762792 23876 1 76 0.00275258 118 0 6.03388e+07 0.0281717 274944 6.06881e+07 8.31615e+06 23902 3.00474e+07 0 0.208574 0.994244 0.758402 6.03388e+07 0.00363835 1.34378e+07 6.06465e+06 1.34042e+07 130 1.34198e+07 9.96321e+06 0.00319457 1.35349e+07 50.2135 0.00453044 0.99625 0 49.9372 GTEX-178AV-0426-SM-6LPJG 1 B1 2 pieces, prominent glandular hyperplastic pattern 7.3 Prostate Prostate 0002367 190 913 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860,LCSET-6156 09/18/2014 TruSeq.v1 RNASEQ 0.990779 212677 0.964263 0.993269 0.751235 25605 1 76 0.0024219 273 0 9.63081e+07 0.0354323 929114 9.69607e+07 9.75747e+06 25650 4.79126e+07 0 0.213028 0.993269 0.746179 9.63081e+07 0.00317031 2.11591e+07 1.09053e+07 2.11782e+07 272 2.11437e+07 1.34038e+07 0.00279517 2.14205e+07 50.3251 0.00958237 0.99576 0 50.0226 GTEX-178AV-0526-SM-6LPJH 1 B1 6 pieces, squamous mucosa is 0.2-0.4mm, ~20-25% thickness; submucosal mucus glands delineated (rep) 8.6 Esophagus Esophagus - Mucosa 0006920 198 905 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991985 167013 0.973013 0.994056 0.783021 22656 1 76 0.00259241 128 0 6.18368e+07 0.0266218 319563 6.22066e+07 9.822e+06 22679 3.07981e+07 0 0.189992 0.994056 0.778366 6.18368e+07 0.00329663 1.39147e+07 7.12343e+06 1.38635e+07 134 1.38863e+07 1.12287e+07 0.00294378 1.40125e+07 50.2262 0.00513712 0.996127 0 49.9078 GTEX-178AV-0626-SM-6PAM1 1 B1 2 pieces, trace fascia/vascular elements delineated 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 200 903 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5864,LCSET-5875 08/23/2014 TruSeq.v1 RNASEQ 0.978391 272098 0.972024 0.986472 0.810707 24679 1 76 0.00319841 375 0 1.05673e+08 0.0276959 1.3014e+06 1.07122e+08 1.26967e+07 24716 5.22861e+07 0 0.161317 0.986472 0.79974 1.05673e+08 0.00579076 2.31288e+07 1.08129e+07 2.3127e+07 340 2.34448e+07 1.60967e+07 0.00448397 2.36271e+07 50.1936 0.0121487 0.994553 0 49.9981 GTEX-178AV-0726-SM-6LPJI 1 B1 2 pieces moderate Hashimoto lymphocytic thyroiditis, rep foci encircled 7.7 Thyroid Thyroid 0002046 207 896 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.989265 222448 0.966311 0.991794 0.734161 24074 1 76 0.00316385 110 0 5.88279e+07 0.0319038 219003 5.93147e+07 8.74765e+06 24107 2.92288e+07 0 0.23215 0.991794 0.728137 5.88279e+07 0.00417002 1.30211e+07 7.58193e+06 1.29532e+07 119 1.30005e+07 9.28938e+06 0.00366565 1.31121e+07 50.2137 0.00369222 0.994323 0 49.8693 GTEX-178AV-0826-SM-7KUET 1 B1 6 pieces, confirmed taret muscularis 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 211 892 BP-51398 RNA Extraction from Paxgene-derived Lysate Plate Based 04/09/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.987712 332708 0.974895 0.991807 0.824698 23101 1 76 0.00294068 281 0 9.2705e+07 0.0247511 794104 9.34708e+07 8.17406e+06 23126 4.60247e+07 0 0.150197 0.991807 0.817941 9.2705e+07 0.00342001 2.00046e+07 7.50907e+06 2.02569e+07 266 2.03947e+07 1.72942e+07 0.00317936 2.0219e+07 49.7836 0.00849574 0.995902 0 50.3134 GTEX-178AV-0926-SM-793BK 1 B1 6 pieces, confirmed target muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 207 896 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994497 344988 0.976476 0.995632 0.833997 21797 1 76 0.00279818 163 0 7.81482e+07 0.0232345 754289 7.8491e+07 1.12533e+07 21812 3.8947e+07 0 0.142479 0.995632 0.830355 7.81482e+07 0.00320232 1.68214e+07 7.65120e+06 1.69441e+07 202 1.69316e+07 1.38173e+07 0.00300002 1.69176e+07 49.9794 0.00960987 0.996767 0 50.1816 GTEX-178AV-1326-SM-6LPJX 1 B1 6 pieces, mucosa up to ~0.4mm, ~15-20% thickness 8 Colon Colon - Transverse 0001157 231 872 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5860 08/09/2014 TruSeq.v1 RNASEQ 0.991084 170847 0.972452 0.993304 0.796239 23323 1 76 0.00273902 164 0 6.96086e+07 0.026326 1.35267e+06 7.00778e+07 1.07284e+07 23351 3.46311e+07 0 0.176213 0.993304 0.790908 6.96086e+07 0.00361187 1.55219e+07 8.30213e+06 1.54384e+07 172 1.54377e+07 9.96808e+06 0.00317447 1.56643e+07 50.3643 0.0193024 0.995524 0 49.8651 GTEX-178AV-1426-SM-6LLID 1 B1 3 pieces, glandular elements (delineated) are ~80-90% total tissue, good specimens 7.8 Salivary Gland Minor Salivary Gland 0006330 234 869 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.975115 223647 0.96622 0.983448 0.754016 25485 1 76 0.00323242 206 0 9.01964e+07 0.031053 343457 9.17144e+07 8.20151e+06 25528 4.44769e+07 0 0.212204 0.983448 0.741535 9.01964e+07 0.00463634 1.99471e+07 1.26289e+07 1.99079e+07 214 2.02405e+07 1.38596e+07 0.00392843 2.03538e+07 50.1396 0.00374485 0.991781 0 49.9508 GTEX-178AV-1726-SM-7KUL8 0 B1 6 pieces, squamous epithelium is ~50 microns; trade dermal fat 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 248 855 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991487 273825 0.968994 0.993057 0.793195 24911 1 76 0.00341583 216 0 8.93265e+07 0.0308098 573499 8.99511e+07 6.63123e+06 24938 4.44826e+07 0 0.175799 0.993057 0.787688 8.93265e+07 0.0040126 1.95832e+07 8.57516e+06 1.97285e+07 233 1.97617e+07 1.51263e+07 0.00371374 1.96851e+07 49.903 0.00637568 0.994627 0 50.1848 GTEX-178AV-1826-SM-7KUE2 0 B1 2 pieces, trace nubbins adherent fat, ~0.6mm, delineated 6.2 Nerve Nerve - Tibial 0001323 251 852 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6679 03/07/2015 TruSeq.v1 RNASEQ 0.986994 467110 0.964826 0.99092 0.732315 25499 1 76 0.00322212 283 0 1.04396e+08 0.0349177 671980 1.05353e+08 9.50187e+06 25556 5.18033e+07 0 0.232511 0.99092 0.725665 1.04396e+08 0.00349289 2.2757e+07 9.68388e+06 2.3071e+07 300 2.32739e+07 1.49183e+07 0.00335697 2.29458e+07 49.645 0.00637839 0.994846 0 50.3426 GTEX-178AV-1926-SM-7KUL9 0 B1 2 pieces, no significant atherosis or adherent fat 8.2 Blood Vessel Artery - Tibial 0007610 251 852 BP-51066 RNA Extraction from Paxgene-derived Lysate Plate Based 04/02/2014 LCSET-6678 03/07/2015 TruSeq.v1 RNASEQ 0.991074 293036 0.976938 0.993243 0.837723 21427 1 76 0.00336247 171 0 7.81494e+07 0.0226519 409245 7.8681e+07 5.93662e+06 21442 3.88694e+07 0 0.139215 0.993243 0.832063 7.81494e+07 0.00440835 1.67208e+07 5.16593e+06 1.6862e+07 178 1.69114e+07 1.51881e+07 0.00388427 1.68332e+07 49.8841 0.00520132 0.995413 0 50.2102 GTEX-17EUY-0003-SM-6RBKF B1 Blood Whole Blood 0013756 -229 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17EUY-0003-SM-6UH27 B1 Blood Whole Blood 0013756 -229 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17EUY-0006-SM-7P8SB B1 8.5 Blood Whole Blood 0013756 -229 BP-50738 RNA isolation_PAXgene Blood RNA (Manual) 03/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.926085 931484 0.952501 0.959416 0.808758 21924 1 76 0.00450178 167 0 9.91025e+07 0.0466816 325283 1.03295e+08 1.58593e+07 21939 4.76541e+07 0 0.143743 0.959416 0.775934 9.91025e+07 0.00954154 2.06827e+07 5.46966e+07 2.08413e+07 181 2.25957e+07 2.03143e+07 0.00693412 2.22007e+07 49.5591 0.00314908 0.992746 0 50.191 GTEX-17EUY-0008-SM-EAZB9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 388 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992703 1.00558e+06 0.959999 0.993717 0.828207 21286 1 76 0.00176631 292 0 1.05131e+08 0.0396595 393081 1.05796e+08 8.28298e+06 21305 5.24075e+07 0 0.131791 0.993717 0.823004 1.05131e+08 0.00274052 2.30076e+07 3.33249e+07 2.32337e+07 257 2.32333e+07 2.7036e+07 0.00225292 2.31263e+07 49.8846 0.00371547 0.994731 0 50.2445 GTEX-17EUY-0226-SM-79OKV 1 B1 2 pieces; one includes up to ~10% internal fat 7.1 Nerve Nerve - Tibial 0001323 381 738 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.978179 164813 0.968663 0.981857 0.756903 23106 1 76 0.00514132 129 0 5.63672e+07 0.0310433 200333 5.74088e+07 1.30493e+07 23134 2.80486e+07 0 0.211759 0.981857 0.743171 5.63672e+07 0.00622633 1.23697e+07 5.40099e+06 1.24518e+07 117 1.25197e+07 8.89745e+06 0.00568179 1.24962e+07 49.9531 0.00348959 0.985536 0 50.1655 GTEX-17EUY-0326-SM-7DUEY 1 B1 2 pieces 7.5 Blood Vessel Artery - Tibial 0007610 383 736 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993064 209578 0.976005 0.993726 0.853512 21599 1 76 0.00261878 216 0 9.15419e+07 0.0235468 278033 9.21199e+07 7.84983e+06 21613 4.55882e+07 0 0.122493 0.993726 0.848157 9.15419e+07 0.00403127 1.97303e+07 7.22264e+06 1.98123e+07 247 1.98134e+07 1.7813e+07 0.00332456 1.97907e+07 49.9714 0.00301817 0.994389 0 50.1037 GTEX-17EUY-0426-SM-793BD 0 B1 6 pieces; well trimmed with minimal internal fat, epidermis measures 45 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 388 731 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99351 344355 0.972631 0.994775 0.783995 24007 1 76 0.00302538 186 0 8.55458e+07 0.0271108 420631 8.59951e+07 1.15011e+07 24037 4.26199e+07 0 0.188636 0.994775 0.779899 8.55458e+07 0.00373668 1.88276e+07 8.85246e+06 1.88616e+07 197 1.89023e+07 1.42316e+07 0.00338058 1.88917e+07 49.986 0.00489134 0.99604 0 50.0451 GTEX-17EUY-0526-SM-7EWDE 0 B1 2 pieces; mature fat with ~30% (1st) and up to 10% (2nd) is fibrous/vascular/nerve tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 386 733 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992224 195873 0.976565 0.994099 0.819341 21789 1 76 0.002372 147 0 6.55966e+07 0.023113 343247 6.5986e+07 5.44009e+06 21806 3.26574e+07 0 0.157224 0.994099 0.814506 6.55966e+07 0.00352229 1.43535e+07 6.26022e+06 1.44704e+07 156 1.44841e+07 1.15268e+07 0.00294606 1.44553e+07 49.9502 0.00520182 0.995974 0 50.2028 GTEX-17EUY-0626-SM-793BE 1 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 391 728 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995149 282460 0.981952 0.996231 0.86552 20281 1 76 0.00287828 217 0 8.56705e+07 0.0178329 1.29353e+06 8.59947e+07 1.18602e+07 20291 4.27181e+07 0 0.116432 0.996231 0.862258 8.56705e+07 0.00333821 1.87666e+07 8.68539e+06 1.88951e+07 222 1.89454e+07 1.74377e+07 0.00310799 1.87961e+07 49.8022 0.015042 0.997312 0 50.1705 GTEX-17EUY-1326-SM-7DHKZ 1 B1 6 pieces; target muscularis, one piece with attached fat/vessels, single focus of skeletal muscle fibers 7.9 Esophagus Esophagus - Muscularis 0004648 419 700 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990426 141715 0.974303 0.991365 0.806494 22251 1 76 0.00355412 159 0 7.25788e+07 0.0254177 288852 7.3211e+07 5.7228e+06 22278 3.61019e+07 0 0.167809 0.991365 0.79953 7.25788e+07 0.00542692 1.5825e+07 5.85599e+06 1.5948e+07 164 1.59503e+07 1.20764e+07 0.00448963 1.58877e+07 49.9017 0.00394547 0.992304 0 50.1936 GTEX-17EUY-1426-SM-7938X 0 B1 6 pieces; includes small portion of muscularis (marked) 9.8 Esophagus Esophagus - Mucosa 0006920 424 695 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993022 412672 0.972894 0.993765 0.810722 21161 1 76 0.00201473 121 0 5.26249e+07 0.0266583 138690 5.2955e+07 2.3324e+06 21177 2.61995e+07 0 0.162173 0.993765 0.805667 5.26249e+07 0.00249094 1.187e+07 6.90662e+06 1.18773e+07 117 1.19874e+07 1.07486e+07 0.00225266 1.17977e+07 49.6014 0.00261901 0.994508 0 50.0156 GTEX-17EUY-1526-SM-793CA 1 B1 6 pieces; full thickness sections, serositis, few dilated deep glands 7.8 Stomach Stomach 0000945 427 692 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994424 431440 0.979967 0.99566 0.842652 21611 1 76 0.00287358 146 0 6.81743e+07 0.0197595 211073 6.84715e+07 9.54416e+06 21626 3.39703e+07 0 0.137314 0.99566 0.838995 6.81743e+07 0.00335816 1.50811e+07 6.01052e+06 1.51535e+07 154 1.52066e+07 1.34858e+07 0.00311557 1.51095e+07 49.8398 0.00308264 0.996895 0 50.1197 GTEX-17EUY-1726-SM-79OK4 2 B1 6 pieces; relatively well trimmed with some residual submucosa, mild inflammation in adventitia 7.2 Colon Colon - Sigmoid 0001159 434 685 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.979129 230559 0.973627 0.982948 0.774928 23082 1 76 0.00488589 139 0 6.69616e+07 0.0261304 281761 6.81232e+07 1.506e+07 23101 3.3302e+07 0 0.198698 0.982948 0.761715 6.69616e+07 0.00617706 1.46434e+07 6.61257e+06 1.47242e+07 144 1.48009e+07 1.04753e+07 0.00552897 1.48079e+07 50.0118 0.00413605 0.986768 0 50.1374 GTEX-17EUY-1826-SM-7DUEZ 2 B1 6 pieces; full thickness sections, inflammation in adventitia 7.3 Colon Colon - Transverse 0001157 436 683 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990368 607500 0.952206 0.991163 0.738386 25707 1 76 0.00325297 211 0 9.61056e+07 0.0470069 629937 9.69624e+07 8.6556e+06 25757 4.7836e+07 0 0.213821 0.991163 0.731861 9.61056e+07 0.00449657 2.07939e+07 2.71769e+07 2.11222e+07 246 2.1156e+07 1.32586e+07 0.00387427 2.08334e+07 49.6158 0.00649671 0.991958 0 50.3916 GTEX-17EUY-1926-SM-7DUF6 1 B1 2 pieces; minimal fat, predominantly dense fibrocollagenous stroma with many scattered ducts, gynecomastoid change 7.4 Breast Breast - Mammary Tissue 0008367 439 680 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992783 215737 0.971758 0.993513 0.799848 23910 1 76 0.00283591 165 0 7.77998e+07 0.0279172 248968 7.83077e+07 6.84756e+06 23949 3.87478e+07 0 0.17191 0.993513 0.79466 7.77998e+07 0.00425844 1.70943e+07 7.56519e+06 1.72515e+07 173 1.7291e+07 1.40665e+07 0.00354665 1.71141e+07 49.743 0.00317936 0.994244 0 50.2289 GTEX-17EUY-2026-SM-79OMV 1 B1 2 pieces; one piece is 90% stroma, second is glands admixed with stroma and ~10% is seminal vesicle (marked) 6.7 Prostate Prostate 0002367 442 677 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.99261 199444 0.958977 0.993099 0.737166 24885 1 76 0.00306379 134 0 7.01685e+07 0.0407843 333330 7.06561e+07 5.01074e+06 24922 3.49487e+07 0 0.221811 0.993099 0.732078 7.01685e+07 0.00411036 1.52783e+07 8.44988e+06 1.54054e+07 152 1.53924e+07 9.86798e+06 0.00358682 1.53277e+07 49.8947 0.00471764 0.993587 0 50.2071 GTEX-17EVP-0004-SM-6RBJT C1 Blood Whole Blood 0013756 792 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17EVP-0004-SM-6UH1L C1 Blood Whole Blood 0013756 792 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17EVP-0005-SM-7P8RC C1 7.9 Blood Whole Blood 0013756 792 BP-50738 RNA isolation_PAXgene Blood RNA (Manual) 03/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.902016 273898 0.980746 0.931605 0.77738 19204 1 76 0.00388222 88 0 7.98416e+07 0.0172205 205269 8.57033e+07 1.20818e+07 19211 3.84926e+07 0 0.203366 0.931605 0.724211 7.98416e+07 0.0101963 1.84018e+07 1.25758e+08 1.77897e+07 118 1.926e+07 1.93168e+07 0.00693896 1.95339e+07 50.3531 0.00239511 0.961194 0 49.1544 GTEX-17EVP-0008-SM-EAZBZ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 961 BP-50732 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993569 562528 0.981092 0.994488 0.87232 20220 1 76 0.00163116 296 0 1.13424e+08 0.0185843 255993 1.14053e+08 8.29224e+06 20236 5.65513e+07 0 0.108772 0.994488 0.867512 1.13424e+08 0.00261117 2.55767e+07 1.34248e+07 2.56705e+07 294 2.56882e+07 3.05731e+07 0.00212071 2.56639e+07 49.9764 0.00224452 0.995407 0 50.0915 GTEX-17EVP-0011-R10a-SM-7IGLP C1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 811 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994744 689639 0.955912 0.995715 0.832722 24327 1 76 0.00189093 274 0 9.57309e+07 0.0437135 2.85339e+06 9.61429e+07 5.83996e+06 24349 4.77228e+07 0 0.12319 0.995715 0.829154 9.57309e+07 0.00262965 2.07988e+07 1.74693e+07 2.11074e+07 319 2.1025e+07 1.27167e+07 0.00225993 2.09673e+07 49.9313 0.0296786 0.996687 0 50.3681 GTEX-17EVP-0011-R10a-SM-AHZLY C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 811 ChIP-Seq GTEX-17EVP-0011-R10a-SM-CYKU1 C1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 811 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 RIP-Seq GTEX-17EVP-0011-R11a-SM-7EWDL C1, A1 6.4 Brain Brain - Cerebellar Hemisphere 0002037 811 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992054 329055 0.944599 0.993765 0.772674 22913 1 76 0.00241491 158 0 6.73604e+07 0.0551052 1.36941e+06 6.77831e+07 5.80816e+06 22935 3.35426e+07 0 0.171925 0.993765 0.767856 6.73604e+07 0.0033289 1.4447e+07 1.37538e+07 1.457e+07 174 1.45815e+07 8.22078e+06 0.00287112 1.45431e+07 49.9342 0.0202029 0.995475 0 50.212 GTEX-17EVP-0011-R1a-SM-7DHLA C1, A1 7.9 Brain Brain - Hippocampus 0001954 811 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990988 307448 0.958168 0.992133 0.814816 23451 1 76 0.00349175 161 0 6.69073e+07 0.0415732 2.41546e+06 6.74378e+07 5.09945e+06 23471 3.33023e+07 0 0.143352 0.992133 0.808406 6.69073e+07 0.0052034 1.46351e+07 1.21954e+07 1.49148e+07 185 1.48505e+07 7.49385e+06 0.00434659 1.47637e+07 49.8533 0.0358177 0.993279 0 50.4732 GTEX-17EVP-0011-R2a-SM-7LG4W C1, A1 6.7 Brain Brain - Substantia nigra 0002038 811 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977895 705586 0.957249 0.985772 0.815563 25012 1 76 0.00344675 290 0 1.14456e+08 0.0425102 8.34939e+06 1.16108e+08 1.76385e+07 25038 5.6583e+07 0 0.141686 0.985772 0.803959 1.14456e+08 0.00554291 2.4775e+07 3.20843e+07 2.49361e+07 316 2.5035e+07 1.19204e+07 0.00448645 2.54945e+07 50.4547 0.0719106 0.99365 0 50.1621 GTEX-17EVP-0011-R3a-SM-7EPI9 C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 811 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991732 726552 0.958646 0.993999 0.84338 23997 1 76 0.00286867 153 0 8.90061e+07 0.0408285 4.87849e+06 8.95434e+07 1.07761e+07 24018 4.43084e+07 0 0.115266 0.993999 0.838319 8.90061e+07 0.0112455 1.92948e+07 2.37649e+07 1.96974e+07 187 1.97194e+07 1.13337e+07 0.00704751 1.9458e+07 49.6664 0.0544819 0.996267 0 50.5163 GTEX-17EVP-0011-R4a-SM-79OML C1, A1 6.6 Brain Brain - Amygdala 0001876 811 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994572 539525 0.95261 0.994878 0.840653 22441 1 76 0.00289031 155 0 5.93245e+07 0.0470771 3.38913e+06 5.96299e+07 3.1228e+06 22453 2.95732e+07 0 0.111957 0.994878 0.836347 5.93245e+07 0.00408357 1.28906e+07 1.64693e+07 1.3076e+07 169 1.30337e+07 6.83342e+06 0.00348676 1.29435e+07 49.8262 0.0568361 0.995183 0 50.3571 GTEX-17EVP-0011-R5b-SM-7DHKW C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 811 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99208 999621 0.947299 0.993048 0.862696 21907 1 76 0.00332599 202 0 7.51156e+07 0.0523209 3.99579e+06 7.56414e+07 5.91726e+06 21916 3.73982e+07 0 0.0846035 0.993048 0.856699 7.51156e+07 0.00505678 1.6131e+07 3.05746e+07 1.64795e+07 247 1.64477e+07 9.51396e+06 0.00419054 1.62496e+07 49.6971 0.0528254 0.994016 0 50.5344 GTEX-17EVP-0011-R6b-SM-7LT99 C1, A1 8.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 811 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989453 1.11869e+06 0.942859 0.99257 0.796059 25706 1 76 0.00265473 271 0 1.03867e+08 0.0566804 5.05281e+06 1.04644e+08 1.1628e+07 25728 5.16219e+07 0 0.1468 0.99257 0.790145 1.03867e+08 0.00367437 2.22443e+07 3.35603e+07 2.23803e+07 293 2.25805e+07 1.3079e+07 0.00316295 2.23479e+07 49.7412 0.0482857 0.995688 0 50.1524 GTEX-17EVP-0011-R7a-SM-7LTAN C1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 811 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990195 1.56926e+06 0.930679 0.992704 0.795151 24522 1 76 0.00256884 271 0 1.02081e+08 0.0690917 8.33923e+06 1.02831e+08 1.06879e+07 24538 5.0766e+07 0 0.135528 0.992704 0.78935 1.02081e+08 0.00346482 2.1575e+07 5.3827e+07 2.17327e+07 293 2.18248e+07 8.85057e+06 0.0030157 2.17033e+07 49.8604 0.0810965 0.995213 0 50.1821 GTEX-17EVP-0011-R8b-SM-7DUF9 C1, A1 7.5 Brain Brain - Hypothalamus 0001898 811 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992808 617620 0.955796 0.993666 0.817019 25495 1 76 0.00269918 375 0 1.02048e+08 0.0438209 4.0976e+06 1.02699e+08 9.05426e+06 25525 5.08212e+07 0 0.138777 0.993666 0.811843 1.02048e+08 0.00394072 2.22172e+07 1.82724e+07 2.26587e+07 331 2.26473e+07 1.25959e+07 0.00331941 2.23086e+07 49.6233 0.0398991 0.994523 0 50.4919 GTEX-17EVP-0126-SM-7EPHW 1 C1 2 pieces; one with ~10% stromal fibrosis (outlined); focal granulomatous reaction with multinucleated giant cells (arrow); the second piece shows mild interstitial fibrosis 6.7 Thyroid Thyroid 0002046 928 950 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989118 187584 0.967771 0.991476 0.676923 24537 1 76 0.00325139 111 0 7.7195e+07 0.0319363 346206 7.78587e+07 1.00252e+07 24583 3.84243e+07 0 0.290848 0.991476 0.671152 7.7195e+07 0.0117802 1.6941e+07 8.36594e+06 1.705e+07 122 1.71175e+07 1.00639e+07 0.00750566 1.70438e+07 49.8922 0.00444659 0.993834 0 50.1603 GTEX-17EVP-0226-SM-79OND 1 C1 2 pieces; >80% mature adipose tissue ; one piece contains ductal structures embedded in dense fibrotic stroma (outlined) 6.5 Breast Breast - Mammary Tissue 0008367 937 941 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99201 117134 0.970906 0.991883 0.728716 23369 1 76 0.00314444 118 0 5.56079e+07 0.0288173 310161 5.60629e+07 3.37747e+06 23398 2.76771e+07 0 0.24219 0.991883 0.722801 5.56079e+07 0.0043697 1.22663e+07 5.08424e+06 1.23145e+07 124 1.23248e+07 7.88046e+06 0.00375714 1.22483e+07 49.8445 0.00553237 0.991756 0 50.0979 GTEX-17EVP-0326-SM-7DHLG 0 C1 6 pieces; <10% dermal fat; ~50 microns thick epidermis; well trimmed 8 Skin Skin - Sun Exposed (Lower leg) 0004264 961 918 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.98959 177448 0.973372 0.990654 0.772281 23629 1 76 0.00366005 208 0 8.49168e+07 0.0263404 278273 8.57179e+07 6.74214e+06 23662 4.22306e+07 0 0.201091 0.990654 0.765063 8.49168e+07 0.00560402 1.85223e+07 8.96423e+06 1.85751e+07 185 1.86438e+07 1.42761e+07 0.00463099 1.85360e+07 49.8551 0.00324638 0.991719 0 50.0712 GTEX-17EVP-0426-SM-79OKG 0 C1 2 pieces; adipose tissue and one 0.9 mm squamous epithelium floater (outlined) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 963 916 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973788 193044 0.971495 0.977805 0.774309 22494 1 76 0.00516222 119 0 5.56806e+07 0.0282081 277020 5.69445e+07 1.30427e+07 22511 2.76836e+07 0 0.197186 0.977805 0.757123 5.56806e+07 0.00645558 1.21401e+07 6.12416e+06 1.221e+07 124 1.22781e+07 8.59841e+06 0.00580624 1.2281e+07 50.0059 0.00486474 0.981822 0 50.1437 GTEX-17EVP-0526-SM-7EPGY 1 C1 2 pieces; one with <10% internal fat and ~1mm fibrotic band (outlined) and other with 80% internal fat (outlined) 6.9 Heart Heart - Atrial Appendage 0006631 972 908 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990983 178257 0.981741 0.993384 0.801548 22901 1 76 0.00296416 155 0 9.41558e+07 0.0179946 3.80714e+06 9.47829e+07 1.24003e+07 22930 4.68898e+07 0 0.180193 0.993384 0.796245 9.41558e+07 0.0113529 2.07837e+07 1.50516e+07 2.13377e+07 189 2.14034e+07 1.13073e+07 0.00714841 2.09195e+07 49.4284 0.040167 0.995785 0 50.6576 GTEX-17EVP-0726-SM-7EWDX 1 C1 2 pieces; moderate congestion and sloughed bronchial epithelium 6.5 Lung Lung 0008952 985 896 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991959 98289 0.974023 0.993674 0.722137 22239 1 76 0.0025417 105 0 5.40724e+07 0.0255747 169555 5.44166e+07 4.59718e+06 22268 2.69158e+07 0 0.251886 0.993674 0.717568 5.40724e+07 0.0034755 1.19707e+07 5.01143e+06 1.20186e+07 116 1.20385e+07 8.03082e+06 0.00300779 1.20351e+07 49.9928 0.00311587 0.995388 0 50.0998 GTEX-17EVP-0726-SM-CYKU5 1 C1 2 pieces; moderate congestion and sloughed bronchial epithelium 6.5 Lung Lung 0008952 985 896 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 RIP-Seq GTEX-17EVP-0926-SM-7IGOY 1 C1 6 pieces;early flat atheromatous plaque (arrow); sparse rim of congested adventitia 6 Blood Vessel Artery - Aorta 0001496 988 894 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993347 106147 0.966157 0.993316 0.725617 21626 1 76 0.00219459 114 0 5.33422e+07 0.0335035 255555 5.37012e+07 2.7101e+06 21650 2.65533e+07 0 0.24054 0.993316 0.720767 5.33422e+07 0.00258296 1.1505e+07 5.04315e+06 1.15709e+07 123 1.15816e+07 7.60031e+06 0.00238878 1.14995e+07 49.8222 0.00475884 0.993286 0 50.1428 GTEX-17EVP-1026-SM-7IGOZ 1 C1 2 pieces; moderate congestion and mild macrovesicular steatosis 5.8 Liver Liver 0001114 991 892 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995472 226772 0.974127 0.995809 0.819672 19724 1 76 0.00189292 140 0 6.11147e+07 0.025718 1.18832e+06 6.1372e+07 2.4108e+06 19736 3.04624e+07 0 0.154455 0.995809 0.816236 6.11147e+07 0.00235551 1.33673e+07 9.41921e+06 1.36158e+07 169 1.36115e+07 7.97949e+06 0.00212414 1.33925e+07 49.5945 0.0193626 0.996146 0 50.4606 GTEX-17EVP-1126-SM-793C4 0 C1 2 pieces;~15% internal/external fat 7.8 Nerve Nerve - Tibial 0001323 995 888 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993184 386380 0.963025 0.99439 0.729698 24736 1 76 0.00295919 166 0 7.90268e+07 0.03672 290514 7.94726e+07 1.0875e+07 24777 3.93521e+07 0 0.233327 0.99439 0.725604 7.90268e+07 0.00351497 1.73387e+07 7.2685e+06 1.73124e+07 174 1.73643e+07 1.13491e+07 0.00323674 1.73769e+07 50.0181 0.00365552 0.995596 0 49.9621 GTEX-17EVP-1226-SM-793BF 0 C1 2 pieces; narrow rim of adventitia (<0.3mm); no plaques 7.6 Blood Vessel Artery - Tibial 0007610 996 887 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994388 390236 0.978863 0.995555 0.849597 20954 1 76 0.0027105 207 0 8.92781e+07 0.0207645 416733 8.96767e+07 1.28618e+07 20971 4.44918e+07 0 0.129266 0.995555 0.84582 8.92781e+07 0.00316988 1.92394e+07 6.72752e+06 1.93321e+07 231 1.93556e+07 1.81567e+07 0.00293992 1.93152e+07 49.9479 0.00464706 0.996722 0 50.1203 GTEX-17EVP-1326-SM-7DHMR 0 C1 2 pieces; ~10% internal fat 8 Muscle Muscle - Skeletal 0011907 998 886 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992349 156859 0.984284 0.993691 0.879323 18746 1 76 0.00319524 153 0 7.8533e+07 0.0154875 636669 7.90316e+07 6.08482e+06 18753 3.91266e+07 0 0.104961 0.993691 0.873775 7.8533e+07 0.00485265 1.69318e+07 7.95907e+06 1.72568e+07 181 1.72614e+07 1.66623e+07 0.00402283 1.70153e+07 49.6411 0.00805588 0.995033 0 50.4754 GTEX-17EVP-1426-SM-79OMN 0 C1 2 pieces; focally fragmented mature adipose tissue with 5% fibrovascular septa 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1010 875 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991928 95553 0.978084 0.991268 0.84039 21989 1 76 0.00297823 145 0 6.21265e+07 0.0215985 243288 6.26737e+07 4.16376e+06 21999 3.09127e+07 0 0.137694 0.991268 0.833051 6.21265e+07 0.00421698 1.37455e+07 6.05806e+06 1.38215e+07 154 1.38201e+07 1.10432e+07 0.00359802 1.3714e+07 49.8073 0.00388182 0.990607 0 50.1379 GTEX-17EVP-2426-SM-7IGNK 1 C1 2 pieces; active spermatogenesis 6 Testis Testis 0000473 1106 784 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6445,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.990987 295992 0.917189 0.992404 0.71209 34653 1 76 0.00217832 290 0 1.1082e+08 0.0824409 848682 1.11668e+08 6.55388e+06 34729 5.52114e+07 0 0.205099 0.992404 0.706681 1.1082e+08 0.00284124 2.24102e+07 1.70341e+07 2.25492e+07 264 2.25978e+07 1.74665e+07 0.0025093 2.24997e+07 49.8913 0.00760004 0.99382 0 50.1546 GTEX-17EVP-2626-SM-7IGMA 0 C1 6 pieces; sparse internal/external fat; well trimmed 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1111 780 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993535 279313 0.972715 0.994446 0.750273 23716 1 76 0.00209271 205 0 8.39983e+07 0.0270793 498134 8.44675e+07 5.32746e+06 23753 4.18654e+07 0 0.222442 0.994446 0.746105 8.39983e+07 0.00291109 1.84612e+07 1.06773e+07 1.86805e+07 209 1.86343e+07 1.20804e+07 0.00250153 1.85849e+07 49.9337 0.00589735 0.995357 0 50.2952 GTEX-17EVP-2926-SM-793BU 1 C1 4 pieces 7.6 Brain Brain - Cerebellum 0002037 1121 772 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992935 538569 0.941361 0.994035 0.711573 23704 1 76 0.00320084 129 0 7.56366e+07 0.0582089 853415 7.60905e+07 1.09232e+07 23738 3.76643e+07 0 0.229788 0.994035 0.707329 7.56366e+07 0.00355479 1.62695e+07 1.69748e+07 1.63319e+07 162 1.63997e+07 9.93101e+06 0.00337762 1.62831e+07 49.8216 0.0112158 0.995136 0 50.0956 GTEX-17EVP-3026-SM-7IGQL 1 C1 4 pieces; one focus of attached meninges 1.9 mm (labeled) 5.9 Brain Brain - Cortex 0001870 1123 771 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994548 518153 0.961483 0.995315 0.840189 22282 1 76 0.00169441 197 0 6.9925e+07 0.0381733 4.00132e+06 7.02541e+07 2.2719e+06 22291 3.48435e+07 0 0.121294 0.995315 0.836252 6.9925e+07 0.00223537 1.51358e+07 2.15942e+07 1.54784e+07 240 1.54329e+07 7.41613e+06 0.00196468 1.52323e+07 49.6729 0.0569549 0.996082 0 50.5595 GTEX-17EVP-3126-SM-79OKW 1 C1 1 piece; 60% adenohypophysis and 40% neurohypophysis (outlined) 7 Pituitary Pituitary 0000007 1124 770 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.979217 408817 0.953261 0.982639 0.748915 24857 1 76 0.00494203 113 0 6.5907e+07 0.046491 227102 6.70714e+07 1.51459e+07 24886 3.27882e+07 0 0.204345 0.982639 0.735913 6.5907e+07 0.00590627 1.344e+07 1.36434e+07 1.35349e+07 131 1.36395e+07 1.05368e+07 0.00542247 1.35401e+07 49.8171 0.00338597 0.98606 0 50.1759 GTEX-17EVQ-0001-SM-6RBK4 C1 Blood Whole Blood 0013756 861 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17EVQ-0001-SM-6UH1V C1 Blood Whole Blood 0013756 861 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17EVQ-0006-SM-7MGWB C1 8.6 Blood Whole Blood 0013756 861 BP-50738 RNA isolation_PAXgene Blood RNA (Manual) 03/21/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.96628 184787 0.987007 0.967743 0.819592 13990 1 76 0.0026236 57 0 6.63053e+07 0.0117289 47502 6.85154e+07 5.28650e+06 13991 3.30255e+07 0 0.167415 0.967743 0.793154 6.63053e+07 0.00352275 1.62394e+07 1.36139e+08 1.61115e+07 99 1.612e+07 2.03141e+07 0.0030725 1.63318e+07 50.3263 0.000693304 0.969205 0 49.8022 GTEX-17EVQ-0008-SM-EAZB7 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 966 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992485 447967 0.976943 0.993413 0.849171 21451 1 76 0.00180262 290 0 1.02387e+08 0.0227111 432619 1.03066e+08 7.93923e+06 21470 5.10364e+07 0 0.127772 0.993413 0.843578 1.02387e+08 0.00270317 2.28012e+07 1.32619e+07 2.29106e+07 262 2.28921e+07 2.6378e+07 0.00225248 2.29168e+07 50.0269 0.00419751 0.994341 0 50.1197 GTEX-17EVQ-0011-R10a-SM-AHZM3 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 880 ChIP-Seq GTEX-17EVQ-0011-R11a-SM-7LT9C C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 880 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987835 836138 0.93422 0.991162 0.74825 23822 1 76 0.00312337 269 0 9.5795e+07 0.0654904 5.0939e+06 9.66492e+07 1.04321e+07 23851 4.7597e+07 0 0.18597 0.991162 0.741637 9.5795e+07 0.00420992 2.03546e+07 3.26914e+07 2.05199e+07 258 2.06351e+07 7.75813e+06 0.00366482 2.05166e+07 49.8561 0.052705 0.994489 0 50.2022 GTEX-17EVQ-0011-R1a-SM-7189S C1, A1 5.8 Brain Brain - Hippocampus 0001954 880 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.97127 1.11195e+06 0.95225 0.982868 0.815471 25554 1 76 0.00282038 376 0 1.37991e+08 0.0475298 1.72359e+07 1.40396e+08 6.5675e+06 25595 6.79595e+07 0 0.136779 0.982868 0.801501 1.37991e+08 0.00548603 2.99116e+07 4.34588e+07 3.0109e+07 367 3.06357e+07 1.08922e+07 0.00413748 3.07758e+07 50.1141 0.122766 0.994466 0 50.1644 GTEX-17EVQ-0011-R3b-SM-7LT9B C1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 880 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98587 1.76868e+06 0.948049 0.990364 0.818023 23743 1 76 0.00313223 372 0 1.46413e+08 0.0517482 2.03776e+07 1.47838e+08 1.68036e+07 23763 7.26666e+07 0 0.130025 0.990364 0.81014 1.46413e+08 0.00436361 3.09813e+07 8.99714e+07 3.16584e+07 349 3.1422e+07 9.24238e+06 0.00374512 3.17428e+07 50.254 0.137838 0.994857 0 50.5405 GTEX-17EVQ-0011-R4b-SM-7LT94 C1, A1 6.3 Brain Brain - Amygdala 0001876 880 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987307 1.57449e+06 0.939729 0.991276 0.813238 21094 1 76 0.00317389 267 0 1.05922e+08 0.060131 1.42985e+07 1.06854e+08 1.18871e+07 21108 5.26284e+07 0 0.126491 0.991276 0.806143 1.05922e+08 0.00450637 2.2349e+07 7.97244e+07 2.24752e+07 311 2.23433e+07 4.24553e+06 0.00383746 2.27966e+07 50.5021 0.133814 0.995244 0 50.1408 GTEX-17EVQ-0011-R5a-SM-7LT92 C1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 880 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990039 806741 0.95549 0.992843 0.816347 22795 1 76 0.00311952 266 0 9.50319e+07 0.0443599 9.39544e+06 9.5717e+07 1.02042e+07 22811 4.72689e+07 0 0.139144 0.992843 0.810504 9.50319e+07 0.00411225 2.03295e+07 4.63463e+07 2.06284e+07 301 2.04725e+07 5.8457e+06 0.00361448 2.07031e+07 50.28 0.0981586 0.995648 0 50.3649 GTEX-17EVQ-0011-R6a-SM-7189U C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 880 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967415 1.15507e+06 0.948317 0.980757 0.81376 25201 1 76 0.00297612 371 0 1.41251e+08 0.0515262 1.71553e+07 1.44022e+08 6.31386e+06 25227 6.9463e+07 0 0.134557 0.980757 0.798101 1.41251e+08 0.00584154 2.99351e+07 5.0116e+07 3.04881e+07 386 3.10062e+07 7.64425e+06 0.00438934 3.09815e+07 49.9801 0.119116 0.994098 0 50.4576 GTEX-17EVQ-0011-R7a-SM-7EWDA C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 880 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992374 444946 0.959882 0.994202 0.824708 20986 1 76 0.00268951 193 0 6.47723e+07 0.0399889 6.06001e+06 6.515e+07 5.75257e+06 20996 3.22847e+07 0 0.135174 0.994202 0.819927 6.47723e+07 0.00359152 1.37866e+07 3.44605e+07 1.42113e+07 234 1.39418e+07 3.9497e+06 0.00313969 1.4139e+07 50.3511 0.0930163 0.99603 0 50.7583 GTEX-17EVQ-0011-R8a-SM-7189T C1, A1 6.4 Brain Brain - Hypothalamus 0001898 880 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968239 1.0213e+06 0.947541 0.980902 0.824589 25767 1 76 0.00276042 374 0 1.18277e+08 0.0522265 9.44666e+06 1.2058e+08 6.28248e+06 25796 5.81531e+07 0 0.122952 0.980902 0.808841 1.18277e+08 0.00554894 2.54305e+07 3.67912e+07 2.56485e+07 361 2.62006e+07 1.05028e+07 0.00413668 2.6242e+07 50.0395 0.0783433 0.993565 0 50.2135 GTEX-17EVQ-0011-R9b-SM-79OJY C1, A1 7.1 Brain Brain - Spinal cord (cervical c-1) 0006469 880 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977573 832831 0.954293 0.98138 0.797823 25012 1 76 0.00511335 400 0 1.25731e+08 0.045211 3.10568e+06 1.28116e+08 2.87636e+07 25051 6.25442e+07 0 0.15647 0.98138 0.782968 1.25731e+08 0.00637795 2.76015e+07 2.53547e+07 2.80798e+07 356 2.79285e+07 1.82468e+07 0.00574319 2.82065e+07 50.2476 0.0242411 0.985187 0 50.4296 GTEX-17EVQ-0126-SM-7IGLR 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~35 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 963 1343 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993897 322629 0.973528 0.994565 0.775123 24690 1 76 0.0021827 171 0 8.39107e+07 0.0262122 368655 8.43693e+07 4.88467e+06 24726 4.18127e+07 0 0.198405 0.994565 0.77091 8.39107e+07 0.0026889 1.85099e+07 9.32246e+06 1.86907e+07 197 1.86508e+07 1.41316e+07 0.00243563 1.86071e+07 49.9414 0.00436954 0.995232 0 50.2429 GTEX-17EVQ-0226-SM-7LG4P 0 C1 6 pieces, minimal dermal fat; squamous eiptheliums is ~40-50 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 965 1341 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.985666 250794 0.972792 0.989776 0.808105 25011 1 76 0.0034966 231 0 9.05105e+07 0.0269203 410493 9.14454e+07 1.22983e+07 25042 4.49282e+07 0 0.164688 0.989776 0.799842 9.05105e+07 0.00512643 1.9654e+07 1.05285e+07 1.9886e+07 242 2.00337e+07 1.67829e+07 0.00430813 1.98597e+07 49.7819 0.00448894 0.993886 0 50.2934 GTEX-17EVQ-0426-SM-7LG57 1 C1 2 pieces, ifbroadipose elements, no ductal elements 6.9 Breast Breast - Mammary Tissue 0008367 991 1316 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977731 356635 0.976342 0.984905 0.793909 23837 1 76 0.00363491 210 0 8.70721e+07 0.0233307 402115 8.84066e+07 1.34705e+07 23869 4.30633e+07 0 0.182433 0.984905 0.781926 8.70721e+07 0.0058514 1.90357e+07 1.15539e+07 1.92679e+07 205 1.95511e+07 1.54649e+07 0.00473508 1.93476e+07 49.7385 0.00454847 0.992079 0 50.3032 GTEX-17EVQ-0526-SM-7KFSK 1 C1 2 pieces, fibrosis/regressive changes 5.7 Thyroid Thyroid 0002046 995 1312 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.986599 242216 0.958551 0.98949 0.684363 25260 1 76 0.00327343 136 0 7.76287e+07 0.0409559 391988 7.84533e+07 6.26539e+06 25309 3.85495e+07 0 0.274188 0.98949 0.677171 7.76287e+07 0.00371121 1.67639e+07 1.01168e+07 1.70183e+07 162 1.7093e+07 9.24139e+06 0.00349168 1.69051e+07 49.7238 0.00499645 0.992381 0 50.3767 GTEX-17EVQ-0626-SM-7KFTB 1 C1 2 pieces, fascia, prominent vascular elements are ~20% tissue total,rep delineated 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 997 1311 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991147 150666 0.972101 0.993049 0.779659 24729 1 76 0.00306228 207 0 8.64943e+07 0.0274013 232357 8.70997e+07 6.61158e+06 24762 4.30221e+07 0 0.192442 0.993049 0.774239 8.64943e+07 0.00322578 1.89736e+07 9.16188e+06 1.92187e+07 244 1.92395e+07 1.34663e+07 0.00314388 1.91162e+07 49.8392 0.00266771 0.994952 0 50.3209 GTEX-17EVQ-1026-SM-7IGOG 0 C1 2 pieces, minimal adherent fat 5.9 Nerve Nerve - Tibial 0001323 1005 1306 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994604 323761 0.964672 0.99468 0.725798 24095 1 76 0.00201758 172 0 7.56137e+07 0.0350619 270642 7.60182e+07 3.16918e+06 24137 3.76685e+07 0 0.238874 0.99468 0.721937 7.56137e+07 0.00247034 1.66119e+07 7.13629e+06 1.67103e+07 169 1.67423e+07 1.12644e+07 0.00224394 1.65909e+07 49.7729 0.00356023 0.994757 0 50.1478 GTEX-17EVQ-1126-SM-7LG58 0 C1 2 pieces, no atherosis, focal Monckeberg medial sclerosis, rep delineated 7 Blood Vessel Artery - Tibial 0007610 1006 1305 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.984216 319160 0.973313 0.988675 0.821528 23034 1 76 0.00346739 213 0 8.75164e+07 0.0262652 326864 8.85189e+07 1.27159e+07 23061 4.33977e+07 0 0.151786 0.988675 0.812224 8.75164e+07 0.00506715 1.87487e+07 8.42732e+06 1.89777e+07 209 1.91533e+07 1.74426e+07 0.00426366 1.89396e+07 49.7195 0.00369259 0.993133 0 50.3036 GTEX-17EVQ-1226-SM-7LG59 0 C1 2 pieces, moderate fiber atrophy, ~30% interstitial fat, rep delineated 8.2 Muscle Muscle - Skeletal 0011907 1008 1303 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983123 466842 0.975973 0.988528 0.831558 23886 1 76 0.00320568 277 0 1.09475e+08 0.0237888 912188 1.10745e+08 1.45815e+07 23914 5.42708e+07 0 0.144415 0.988528 0.822019 1.09475e+08 0.00536202 2.37594e+07 1.58611e+07 2.39031e+07 273 2.40865e+07 2.18217e+07 0.00427795 2.41215e+07 50.0363 0.00823683 0.993933 0 50.1508 GTEX-17EVQ-1526-SM-79ONG 2 C1 2 pieces, diffuse congestion, acute and chronic 6.6 Lung Lung 0008952 1029 1284 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992307 149878 0.967367 0.99248 0.753921 24005 1 76 0.00340833 124 0 6.42058e+07 0.0323665 269638 6.46923e+07 3.81514e+06 24042 3.19644e+07 0 0.213446 0.99248 0.748252 6.42058e+07 0.00466493 1.41125e+07 8.5976e+06 1.42508e+07 141 1.4239e+07 9.24479e+06 0.00403652 1.41335e+07 49.8142 0.00416801 0.992654 0 50.2436 GTEX-17EVQ-1526-SM-CYKTA 2 C1 2 pieces, diffuse congestion, acute and chronic 6.6 Lung Lung 0008952 1029 1284 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 RIP-Seq GTEX-17EVQ-1626-SM-79ONH 1 C1 6 pieces, atherosis up to ~0.15mm 6.6 Blood Vessel Artery - Aorta 0001496 1031 1284 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.989807 182960 0.965984 0.989704 0.714571 23273 1 76 0.00352206 127 0 6.92792e+07 0.0336587 204569 7e+07 4.43382e+06 23305 3.44309e+07 0 0.251413 0.989704 0.707214 6.92792e+07 0.00480104 1.49631e+07 6.91462e+06 1.49988e+07 141 1.49949e+07 1.04752e+07 0.00416162 1.49639e+07 49.9484 0.00292242 0.989601 0 50.0595 GTEX-17EVQ-1726-SM-7LT9R 1 C1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1032 1283 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990476 219824 0.969101 0.992021 0.794424 24037 1 76 0.00283275 272 0 9.1765e+07 0.0306793 1.92805e+06 9.25031e+07 9.55612e+06 24068 4.5635e+07 0 0.174677 0.992021 0.788085 9.1765e+07 0.00382164 2.01725e+07 1.27653e+07 2.02954e+07 262 2.03541e+07 1.32533e+07 0.00332643 2.02468e+07 49.8678 0.0208431 0.993566 0 50.1518 GTEX-17EVQ-1826-SM-7IGPH 3 C1 6 pieces, mucosa ~0.2mm, completely autolyzed 5.8 Colon Colon - Transverse 0001157 1034 1282 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994269 159558 0.972825 0.994531 0.818041 23528 1 76 0.0021461 156 0 7.01363e+07 0.0261645 273728 7.0522e+07 2.57102e+06 23549 3.49275e+07 0 0.154784 0.994531 0.813567 7.01363e+07 0.00277222 1.53279e+07 7.25373e+06 1.54714e+07 172 1.54437e+07 1.20691e+07 0.00245907 1.53793e+07 49.8955 0.00388146 0.994792 0 50.233 GTEX-17EVQ-1926-SM-7IGOF 1 C1 6 pieces, squamous mucosa up to ~0.5mm, ~50% thickness 6 Esophagus Esophagus - Mucosa 0006920 1035 1282 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994895 447427 0.963966 0.995165 0.810456 21960 1 76 0.00197619 157 0 7.39604e+07 0.0358913 1.22398e+06 7.43197e+07 2.70516e+06 21978 3.68713e+07 0 0.15351 0.995165 0.806537 7.39604e+07 0.00250299 1.63017e+07 1.34478e+07 1.65468e+07 201 1.65295e+07 1.05115e+07 0.00223952 1.63459e+07 49.7208 0.0164692 0.995436 0 50.3731 GTEX-17EVQ-2726-SM-7EWDT 1 C1 4 pieces, no abnormalities 6.4 Brain Brain - Cerebellum 0002037 1059 1263 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991277 369940 0.93691 0.993001 0.708383 22829 1 76 0.00264388 124 0 6.40272e+07 0.0627697 1.28308e+06 6.44785e+07 5.35216e+06 22858 3.18671e+07 0 0.228527 0.993001 0.703425 6.40272e+07 0.00362489 1.36737e+07 1.59386e+07 1.3798e+07 145 1.38064e+07 6.76213e+06 0.00313354 1.37691e+07 49.9324 0.0198993 0.994724 0 50.2263 GTEX-17EVQ-2826-SM-7IGQK 1 C1 4 pieces, no abnormalites 5.8 Brain Brain - Cortex 0001870 1060 1263 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994597 649136 0.955516 0.995202 0.825161 23092 1 76 0.00208774 267 0 7.80279e+07 0.0442478 4.83467e+06 7.84041e+07 2.46658e+06 23106 3.89009e+07 0 0.130355 0.995202 0.821201 7.80279e+07 0.00258245 1.67646e+07 2.53714e+07 1.72868e+07 288 1.71171e+07 7.26436e+06 0.00233495 1.69771e+07 49.7948 0.0616634 0.995807 0 50.7667 GTEX-17EVQ-2926-SM-7EWE3 1 C1 1 piece, ~25% neurohypophysis, delineated, ~3x3mm; rest is adenohyphphysis, adherent dura ensquared 6.3 Pituitary Pituitary 0000007 1061 1260 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989537 166851 0.96097 0.99153 0.741003 24969 1 76 0.00259973 119 0 5.64805e+07 0.0387798 406331 5.69629e+07 4.99873e+06 25003 2.80795e+07 0 0.219967 0.99153 0.734727 5.64805e+07 0.00380803 1.2245e+07 6.27781e+06 1.23041e+07 132 1.23314e+07 7.52818e+06 0.00320267 1.23233e+07 49.9834 0.00713325 0.993523 0 50.1204 GTEX-17F96-0002-SM-6RBJL C1 Blood Whole Blood 0013756 470 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17F96-0002-SM-6UH1K C1 Blood Whole Blood 0013756 470 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17F96-0008-SM-EAZB6 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 564 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992217 551136 0.961575 0.993285 0.824479 19758 1 76 0.00177979 140 0 6.60988e+07 0.0381082 309629 6.65457e+07 4.98405e+06 19771 3.29369e+07 0 0.137096 0.993285 0.818942 6.60988e+07 0.00297989 1.45639e+07 1.79675e+07 1.47102e+07 132 1.46936e+07 1.6506e+07 0.00237919 1.46594e+07 49.9417 0.00465288 0.994352 0 50.2498 GTEX-17F96-0126-SM-7EWDU 1 C1 6 pieces; well trimmed; 10% dermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 472 1149 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991058 149300 0.97265 0.992999 0.795775 23296 1 76 0.00244684 131 0 5.89158e+07 0.0271544 565974 5.93312e+07 4.97354e+06 23318 2.93259e+07 0 0.176876 0.992999 0.790203 5.89158e+07 0.00375252 1.29948e+07 6.38953e+06 1.30925e+07 144 1.30836e+07 9.09302e+06 0.0030984 1.31083e+07 50.0471 0.00953922 0.994939 0 50.1873 GTEX-17F96-0226-SM-7EPGV 1 C1 2 pieces; hyalinized tubules, no spermatogenesis 6.9 Testis Testis 0000473 474 1148 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 EXCLUDE 0.989771 180629 0.970826 0.991994 0.710652 24669 1 76 0.00334166 116 0 7.75456e+07 0.0288937 415213 7.81715e+07 1.00403e+07 24718 3.86028e+07 0 0.260174 0.991994 0.704962 7.75456e+07 0.0118228 1.7074e+07 8.09511e+06 1.72037e+07 122 1.72547e+07 1.17105e+07 0.00757271 1.71851e+07 49.8989 0.00531157 0.994217 0 50.1892 GTEX-17F96-0326-SM-793BR 1 C1 2 pieces; well trimmed; <5% fat 7.6 Nerve Nerve - Tibial 0001323 537 1085 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992026 508958 0.969485 0.993325 0.755671 24220 1 76 0.00299136 211 0 9.0552e+07 0.0301978 328251 9.11605e+07 1.27146e+07 24267 4.50985e+07 0 0.213814 0.993325 0.750627 9.0552e+07 0.00351986 2.00273e+07 8.08020e+06 2.00389e+07 204 2.00969e+07 1.49022e+07 0.00325526 2.00806e+07 49.9797 0.0036008 0.994624 0 50.0145 GTEX-17F96-0526-SM-79OLE 2 C1 2 pieces; nodular, especially in 1 piece 7 Thyroid Thyroid 0002046 540 1084 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.981181 220234 0.960941 0.984748 0.730518 23759 1 76 0.00490045 123 0 6.41403e+07 0.0388041 283711 6.51337e+07 1.42316e+07 23792 3.19072e+07 0 0.230423 0.984748 0.719376 6.41403e+07 0.00604377 1.39239e+07 7.11716e+06 1.39836e+07 128 1.40674e+07 9.56096e+06 0.00547004 1.40542e+07 49.9766 0.00435583 0.988316 0 50.1069 GTEX-17F96-0626-SM-793CC 2 C1 2 pieces; prominent diffuse emphysema 7.7 Lung Lung 0008952 541 1083 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992258 528809 0.973963 0.993775 0.778652 23090 1 76 0.00305176 127 0 6.25592e+07 0.025603 155298 6.29511e+07 8.71804e+06 23117 3.11232e+07 0 0.195311 0.993775 0.773805 6.25592e+07 0.00370915 1.38702e+07 5.19141e+06 1.38411e+07 141 1.39247e+07 1.07062e+07 0.00337995 1.38783e+07 49.9166 0.00246696 0.995293 0 49.9474 GTEX-17F96-0726-SM-793CB 0 C1 2 pieces; minimal stromal content 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 543 1082 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992495 339062 0.974086 0.993848 0.783962 23002 1 76 0.00300265 132 0 6.5523e+07 0.0255366 264892 6.59286e+07 9.4928e+06 23034 3.26205e+07 0 0.190124 0.993848 0.779139 6.5523e+07 0.00367461 1.45106e+07 7.09511e+06 1.4494e+07 144 1.45574e+07 1.19264e+07 0.00333817 1.45377e+07 49.9663 0.00401786 0.9952 0 49.9714 GTEX-17F96-0826-SM-7DHLU 1 C1 2 pieces; 1 piece has 10% fibrofatty content 7.9 Heart Heart - Atrial Appendage 0006631 544 1081 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991617 185981 0.977721 0.992816 0.818653 22972 1 76 0.00354009 268 0 9.18989e+07 0.021988 2.34614e+06 9.25639e+07 6.93312e+06 22992 4.57565e+07 0 0.159068 0.992816 0.812771 9.18989e+07 0.00519037 2.00428e+07 1.21532e+07 2.03065e+07 260 2.0356e+07 1.50675e+07 0.00436423 2.00847e+07 49.6645 0.0253462 0.994014 0 50.3267 GTEX-17F96-1126-SM-7EWDF 1 C1 6 pieces; thick flat intimal plaque up to 1.2 mm 6.3 Blood Vessel Artery - Aorta 0001496 556 1071 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989418 139326 0.973366 0.99143 0.81631 20852 1 76 0.0024242 128 0 5.72969e+07 0.0262709 200607 5.77922e+07 5.094e+06 20862 2.84931e+07 0 0.157055 0.99143 0.809315 5.72969e+07 0.00376188 1.22178e+07 7.07313e+06 1.23119e+07 136 1.22964e+07 1.05777e+07 0.00309168 1.23422e+07 50.093 0.00347118 0.993443 0 50.1919 GTEX-17F96-1226-SM-79OK2 1 C1 2 pieces; moderate central vein congestion 7 Liver Liver 0001114 557 1071 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.980764 380465 0.95904 0.98443 0.767863 21231 1 76 0.00498659 111 0 6.11409e+07 0.0407904 1.14324e+06 6.21079e+07 1.34529e+07 21253 3.04236e+07 0 0.191177 0.98443 0.755907 6.11409e+07 0.00624695 1.31585e+07 1.50283e+07 1.3293e+07 132 1.33543e+07 8.62913e+06 0.00561443 1.33026e+07 49.9031 0.0184074 0.988097 0 50.2542 GTEX-17F96-1426-SM-7IGQA 2 C1 2 pieces; severe vascular congestion 5.9 Spleen Spleen 0002106 560 1069 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993696 193345 0.954325 0.99342 0.710901 24269 1 76 0.00230011 135 0 7.10381e+07 0.0452775 621251 7.15087e+07 4.36649e+06 24308 3.53593e+07 0 0.243425 0.99342 0.706223 7.10381e+07 0.00276334 1.54526e+07 1.01853e+07 1.55286e+07 157 1.55731e+07 9.04377e+06 0.00253179 1.53978e+07 49.7169 0.00868777 0.993145 0 50.1227 GTEX-17F96-1626-SM-7DUFL 1 C1 6 pieces; well trimmed; 5% dermal fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 563 1067 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991175 332484 0.970778 0.991959 0.796702 24042 1 76 0.00282236 253 0 9.43952e+07 0.0289746 328510 9.51604e+07 9.01723e+06 24077 4.69828e+07 0 0.174076 0.991959 0.790296 9.43952e+07 0.00438118 2.04167e+07 1.00927e+07 2.05135e+07 230 2.05781e+07 1.67617e+07 0.00360116 2.04251e+07 49.8134 0.00345217 0.992744 0 50.1183 GTEX-17F96-1726-SM-7IGMB 1 C1 2 pieces; low stromal content 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 565 1066 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994002 392657 0.973853 0.994898 0.804943 23552 1 76 0.00210233 276 0 9.16384e+07 0.0258869 839791 9.21083e+07 6.08284e+06 23587 4.56669e+07 0 0.16891 0.994898 0.800836 9.16384e+07 0.00271694 2.00962e+07 9.34097e+06 2.03949e+07 263 2.03299e+07 1.47105e+07 0.00240936 2.02373e+07 49.8858 0.00911743 0.995795 0 50.3688 GTEX-17F96-1926-SM-7MGWY 2 C1 6 pieces; arterial sclerosis; 30% glomeruli sclerosed; hyalin casts 5.6 Kidney Kidney - Cortex 0001225 568 1065 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990759 180122 0.971954 0.992639 0.842897 22813 1 76 0.00282441 151 0 6.7668e+07 0.0278853 2.53616e+06 6.81698e+07 5.20638e+06 22831 3.37194e+07 0 0.129057 0.992639 0.836692 6.7668e+07 0.00347337 1.49938e+07 1.08519e+07 1.52686e+07 198 1.5231e+07 7.62682e+06 0.00314828 1.51405e+07 49.8511 0.0372037 0.994519 0 50.4541 GTEX-17F96-2026-SM-79ON4 2 C1 6 pieces; mucosa=3;muscle = 1 (autolysis) 6.7 Colon Colon - Transverse 0001157 569 1064 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992208 160496 0.97169 0.992108 0.816732 21941 1 76 0.00308082 131 0 6.32333e+07 0.0280507 247578 6.37363e+07 3.88811e+06 21958 3.14803e+07 0 0.154958 0.992108 0.810286 6.32333e+07 0.00435849 1.35345e+07 4.80166e+06 1.36041e+07 143 1.35782e+07 1.12728e+07 0.00371972 1.35554e+07 49.958 0.00388441 0.992008 0 50.1282 GTEX-17F96-2126-SM-7KFSM 1 C1 6 pieces; well dissected 6.4 Colon Colon - Sigmoid 0001159 572 1062 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991323 241881 0.968488 0.992897 0.81136 22653 1 76 0.00286164 192 0 8.30264e+07 0.0313041 497033 8.36204e+07 6.34186e+06 22674 4.13049e+07 0 0.157128 0.992897 0.805597 8.30264e+07 0.0032271 1.76188e+07 6.90726e+06 1.79489e+07 204 1.78999e+07 1.36964e+07 0.00304408 1.77943e+07 49.8521 0.00594392 0.994471 0 50.464 GTEX-17F96-2426-SM-7IGLN 1 C1 2 pieces; all fat no mammary tissue 6 Breast Breast - Mammary Tissue 0008367 577 1058 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994557 368304 0.977534 0.99527 0.832975 24436 1 76 0.00212469 379 0 1.40881e+08 0.0221769 1.59432e+06 1.41551e+08 9.36584e+06 24472 7.02123e+07 0 0.144559 0.99527 0.829035 1.40881e+08 0.00288624 3.09596e+07 1.60115e+07 3.1537e+07 408 3.14545e+07 2.24273e+07 0.00250519 3.11454e+07 49.7532 0.0112632 0.995983 0 50.462 GTEX-17F96-2526-SM-7DHL3 1 C1 6 pieces; 1 large (1 mm) submucosal gland 7.9 Esophagus Esophagus - Mucosa 0006920 578 1059 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990248 202628 0.970498 0.991461 0.754048 22898 1 76 0.00366469 144 0 7.71516e+07 0.0292707 367158 7.7816e+07 5.84022e+06 22923 3.83913e+07 0 0.21645 0.991461 0.747609 7.71516e+07 0.00549449 1.7174e+07 9.75653e+06 1.73234e+07 161 1.73546e+07 1.23194e+07 0.00457847 1.72352e+07 49.8273 0.00471828 0.992675 0 50.2166 GTEX-17F96-2726-SM-7LT9F 1 C1 2 pieces; patchy atrophy 8.5 Muscle Muscle - Skeletal 0011907 581 1057 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990274 308899 0.976714 0.99288 0.856373 22034 1 76 0.0025199 302 0 1.07577e+08 0.0229821 1.09479e+06 1.08349e+08 1.22524e+07 22054 5.35244e+07 0 0.120341 0.99288 0.850275 1.07577e+08 0.00344726 2.35477e+07 1.1756e+07 2.37968e+07 280 2.39351e+07 2.28965e+07 0.00298237 2.3667e+07 49.7183 0.0101043 0.995485 0 50.2631 GTEX-17F96-2826-SM-7IGP3 1 C1 6 pieces; well dissected muscle 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 582 1056 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993807 155351 0.967826 0.994092 0.783436 22582 1 76 0.00213566 157 0 6.95298e+07 0.0319607 1.42931e+06 6.9943e+07 2.95722e+06 22607 3.4644e+07 0 0.184391 0.994092 0.778807 6.95298e+07 0.00255717 1.5155e+07 6.63480e+06 1.54569e+07 180 1.54219e+07 8.93111e+06 0.00234635 1.52123e+07 49.6579 0.0204353 0.994377 0 50.4931 GTEX-17F97-0002-SM-6RBLP C1 Blood Whole Blood 0013756 773 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17F97-0002-SM-6UH2Z C1 Blood Whole Blood 0013756 773 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17F97-0008-SM-EAZBB C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 917 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.990535 2.48527e+06 0.900616 0.991666 0.757729 20668 1 76 0.00161683 227 0 1.08179e+08 0.098927 529518 1.09088e+08 8.1475e+06 20689 5.39166e+07 0 0.142886 0.991666 0.751415 1.08179e+08 0.00260341 2.22012e+07 1.07807e+08 2.26664e+07 247 2.26939e+07 2.49872e+07 0.00210956 2.23302e+07 49.5961 0.00485405 0.992797 0 50.5184 GTEX-17F97-0011-R10b-SM-793BB C1, A1 7.6 Brain Brain - Frontal Cortex (BA9) 0009834 823 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994432 709636 0.957419 0.995577 0.829728 24004 1 76 0.00284738 269 0 8.37091e+07 0.0420722 3.55891e+06 8.4081e+07 1.15688e+07 24026 4.17053e+07 0 0.127691 0.995577 0.826058 8.37091e+07 0.00322957 1.82176e+07 2.02497e+07 1.83005e+07 265 1.83429e+07 1.09602e+07 0.00303826 1.82728e+07 49.9043 0.0423272 0.996722 0 50.1135 GTEX-17F97-0011-R11b-SM-7KFRQ C1, A1 9.1 Brain Brain - Cerebellar Hemisphere 0002037 823 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989572 778707 0.936134 0.991867 0.705698 24293 1 76 0.003253 157 0 7.8588e+07 0.0634519 1.13299e+06 7.92325e+07 6.46873e+06 24329 3.90371e+07 0 0.230437 0.991867 0.699958 7.8588e+07 0.00332302 1.66312e+07 1.82316e+07 1.69033e+07 179 1.69908e+07 9.59270e+06 0.00328793 1.67188e+07 49.5966 0.0142995 0.994161 0 50.4057 GTEX-17F97-0011-R1b-SM-7IGM9 C1, A1 6.2 Brain Brain - Hippocampus 0001954 823 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99364 1.55865e+06 0.938876 0.994522 0.795552 24177 1 76 0.00189537 373 0 1.28272e+08 0.0608627 1.2575e+07 1.28979e+08 8.248e+06 24202 6.39757e+07 0 0.143324 0.994522 0.791193 1.28272e+08 0.00241815 2.66356e+07 8.13913e+07 2.79727e+07 348 2.74699e+07 9.12478e+06 0.00215653 2.72094e+07 49.7618 0.0974969 0.995404 0 51.2243 GTEX-17F97-0011-R3b-SM-7LT9E C1, A1 7.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 823 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989589 547052 0.94712 0.99253 0.832453 22731 1 76 0.00251128 196 0 6.22553e+07 0.0526098 4.44066e+06 6.27239e+07 6.65476e+06 22744 3.0943e+07 0 0.114667 0.99253 0.826234 6.22553e+07 0.00376943 1.34154e+07 1.99667e+07 1.34759e+07 211 1.35051e+07 5.70881e+06 0.00313849 1.35531e+07 50.0888 0.0707969 0.99547 0 50.1126 GTEX-17F97-0011-R4b-SM-7KFS2 C1, A1 7.3 Brain Brain - Amygdala 0001876 823 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988661 1.06915e+06 0.938787 0.992117 0.823027 22904 1 76 0.0027885 265 0 7.59577e+07 0.0610178 8.77128e+06 7.65612e+07 6.19265e+06 22917 3.77534e+07 0 0.115761 0.992117 0.816539 7.59577e+07 0.00292395 1.59736e+07 3.78757e+07 1.67008e+07 308 1.66062e+07 5.25008e+06 0.00285599 1.63002e+07 49.5351 0.114566 0.995573 0 51.1128 GTEX-17F97-0011-R5a-SM-7LG4Z C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 823 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.982848 1.12557e+06 0.946577 0.988221 0.787526 25289 1 76 0.00348184 271 0 1.0214e+08 0.0530823 6.4332e+06 1.03357e+08 1.50404e+07 25312 5.0622e+07 0 0.159051 0.988221 0.77825 1.0214e+08 0.00504354 2.17778e+07 4.90028e+07 2.1853e+07 279 2.19546e+07 1.13082e+07 0.00425844 2.21694e+07 50.2434 0.0622422 0.993595 0 50.0861 GTEX-17F97-0011-R6a-SM-7EPGS C1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 823 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991796 515139 0.949343 0.993966 0.810041 24554 1 76 0.00305559 152 0 8.73097e+07 0.0503799 5.62267e+06 8.78397e+07 1.14679e+07 24575 4.35049e+07 0 0.139302 0.993966 0.805153 8.73097e+07 0.0112963 1.87153e+07 2.43915e+07 1.91064e+07 176 1.90777e+07 9.35491e+06 0.00716694 1.89163e+07 49.7876 0.0640106 0.996135 0 50.517 GTEX-17F97-0011-R7b-SM-7MGVY C1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 823 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990616 552141 0.951834 0.992534 0.835236 23365 1 76 0.00251863 268 0 8.51274e+07 0.0479711 8.03717e+06 8.57677e+07 6.50234e+06 23379 4.2415e+07 0 0.116598 0.992534 0.829 8.51274e+07 0.00329771 1.84248e+07 2.56524e+07 1.88123e+07 300 1.87168e+07 7.74353e+06 0.00290742 1.86599e+07 49.9238 0.0937086 0.994452 0 50.5203 GTEX-17F97-0011-R8a-SM-7DUET C1, A1 7.4 Brain Brain - Hypothalamus 0001898 823 BP-52318 RNA isolation_PAXgene Tissue miRNA 05/02/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993872 570426 0.956847 0.994633 0.816178 24652 1 76 0.00271942 272 0 8.94062e+07 0.0428164 4.6192e+06 8.98886e+07 7.52806e+06 24678 4.45494e+07 0 0.140669 0.994633 0.811798 8.94062e+07 0.00386914 1.95037e+07 1.93579e+07 1.98337e+07 293 1.98212e+07 1.0869e+07 0.00329384 1.95803e+07 49.6944 0.051388 0.995394 0 50.4194 GTEX-17F97-0126-SM-7LT8N 1 C1 2 pieces; 40% & 30% internal fat 6.7 Nerve Nerve - Tibial 0001323 912 765 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988834 138743 0.975376 0.991547 0.824437 22500 1 76 0.00284076 155 0 6.57821e+07 0.0242501 212853 6.63429e+07 7.51318e+06 22525 3.26756e+07 0 0.15094 0.991547 0.817468 6.57821e+07 0.00402839 1.43773e+07 6.34127e+06 1.44822e+07 150 1.45674e+07 1.25809e+07 0.00343296 1.44626e+07 49.8194 0.00320837 0.99426 0 50.1817 GTEX-17F97-0226-SM-7LG6Q 1 C1 2 pieces; 1 piece heavily calcified & fragmented (useless); other has 50% occlusive sclerotic partly calcified plaque; little normal tissue remains 6.6 Blood Vessel Artery - Tibial 0007610 916 762 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98196 303659 0.975008 0.986812 0.832143 23517 1 76 0.00345145 276 0 9.6845e+07 0.0246225 481629 9.81392e+07 1.35146e+07 23545 4.79782e+07 0 0.142865 0.986812 0.821169 9.6845e+07 0.00524895 2.08686e+07 1.40305e+07 2.10454e+07 273 2.12836e+07 1.86251e+07 0.00434578 2.10734e+07 49.7519 0.00490761 0.991664 0 50.211 GTEX-17F97-0326-SM-7LG5B 1 C1 6 pieces; well trimmed; minimal dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 917 761 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978817 339559 0.970131 0.986313 0.781357 24331 1 76 0.00349684 198 0 7.58136e+07 0.0296371 471657 7.68657e+07 1.16516e+07 24360 3.74827e+07 0 0.188774 0.986313 0.770662 7.58136e+07 0.0055855 1.63726e+07 9.39346e+06 1.65079e+07 172 1.67492e+07 1.19014e+07 0.00453323 1.6659e+07 49.8651 0.00613612 0.993808 0 50.2057 GTEX-17F97-0426-SM-7LT9U 1 C1 2 pieces; focus of dystrophic calcification [labeled]; 10% fibrous content 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 918 760 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990028 326900 0.974613 0.992708 0.808102 24816 1 76 0.0026726 284 0 1.12499e+08 0.024997 551822 1.13326e+08 1.19426e+07 24856 5.5945e+07 0 0.166512 0.992708 0.802208 1.12499e+08 0.00379982 2.45617e+07 1.1723e+07 2.47371e+07 290 2.48933e+07 2.08464e+07 0.00323469 2.46848e+07 49.7897 0.00486935 0.995387 0 50.1779 GTEX-17F97-0526-SM-7DUF8 1 C1 2 pieces; focal atrophy; 10% internal fat 7.5 Muscle Muscle - Skeletal 0011907 920 759 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993359 365527 0.981922 0.994148 0.849892 21523 1 76 0.00246457 273 0 9.49332e+07 0.0178651 1.17126e+06 9.5492e+07 8.43476e+06 21547 4.72887e+07 0 0.13203 0.994148 0.844918 9.49332e+07 0.00386849 2.09645e+07 9.03138e+06 2.12331e+07 266 2.12738e+07 1.90217e+07 0.00316597 2.09893e+07 49.6635 0.0122655 0.994937 0 50.3183 GTEX-17F97-0626-SM-7IGOH 2 C1 2 pieces; nodular 5.8 Thyroid Thyroid 0002046 923 756 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993405 289719 0.968888 0.99363 0.758233 24047 1 76 0.0021042 160 0 7.97547e+07 0.030801 284147 8.0266e+07 3.16644e+06 24078 3.97276e+07 0 0.210655 0.99363 0.753404 7.97547e+07 0.00241244 1.73989e+07 8.80152e+06 1.75287e+07 176 1.75471e+07 1.38126e+07 0.00225829 1.74057e+07 49.7978 0.00354007 0.993856 0 50.1857 GTEX-17F97-1226-SM-79OJT 1 C1 2 pieces; thin submesothelial fibrosis 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 943 740 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.97723 126606 0.978272 0.980931 0.827957 22499 1 76 0.00520574 122 0 5.6703e+07 0.0213591 215376 5.78053e+07 1.33017e+07 22514 2.82017e+07 0 0.150315 0.980931 0.812168 5.6703e+07 0.00647012 1.24311e+07 6.5694e+06 1.25006e+07 124 1.25509e+07 1.08379e+07 0.00583554 1.25808e+07 50.0595 0.00372588 0.984631 0 50.1395 GTEX-17F97-1326-SM-7MGVO 2 C1 6 pieces; epithelial sloughing 5.6 Esophagus Esophagus - Mucosa 0006920 950 733 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990573 181919 0.966611 0.992787 0.764962 23388 1 76 0.00278169 160 0 7.44097e+07 0.0331878 892132 7.49504e+07 5.68399e+06 23414 3.70446e+07 0 0.201649 0.992787 0.759444 7.44097e+07 0.00365536 1.64094e+07 1.0852e+07 1.65415e+07 190 1.65228e+07 9.00125e+06 0.00321755 1.65862e+07 50.0956 0.011903 0.995001 0 50.2004 GTEX-17F97-1426-SM-7LG5C 1 C1 6 pieces; well dissected muscle 6.8 Esophagus Esophagus - Muscularis 0004648 951 733 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978896 257163 0.969566 0.985832 0.756079 24015 1 76 0.00381518 159 0 7.54744e+07 0.0301629 1.55878e+06 7.65591e+07 1.1823e+07 24047 3.7311e+07 0 0.213487 0.985832 0.745367 7.54744e+07 0.00578319 1.64042e+07 9.93674e+06 1.65836e+07 168 1.68002e+07 1.03913e+07 0.00479226 1.66804e+07 49.821 0.0203604 0.992768 0 50.272 GTEX-17F97-1626-SM-72D6W 1 C1 2 pieces; patchy vascular congestion 6 Spleen Spleen 0002106 955 730 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.984995 131425 0.955871 0.985648 0.741074 23620 1 76 0.00337302 134 0 7.0719e+07 0.0437947 1.0045e+06 7.17487e+07 4.06485e+06 23650 3.51455e+07 0 0.214797 0.985648 0.730439 7.0719e+07 0.00391753 1.53491e+07 9.9533e+06 1.53611e+07 161 1.54008e+07 8.7322e+06 0.0036451 1.5356e+07 49.9272 0.0140002 0.986302 0 50.0195 GTEX-17F97-1926-SM-7IGM4 3 C1 6 pieces; severe vascular, glomerular & interstitial sclerosis; hyalin casts; calcified arteries; consistent with end stage renal disease 6.1 Kidney Kidney - Cortex 0001225 962 724 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993283 275656 0.972584 0.994034 0.799581 25813 1 76 0.0023247 377 0 1.20772e+08 0.0269741 1.48441e+06 1.21497e+08 7.9601e+06 25857 6.01613e+07 0 0.173004 0.994034 0.79481 1.20772e+08 0.0031317 2.645e+07 1.2395e+07 2.66957e+07 357 2.66595e+07 2.06912e+07 0.0027279 2.65826e+07 49.9278 0.0122177 0.994785 0 50.2312 GTEX-17F97-2526-SM-7EWDV 1 C1 2 pieces; fat with 10% fibrous content; no mammary (ductal) tissue 6.3 Breast Breast - Mammary Tissue 0008367 978 713 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990195 101016 0.976771 0.991783 0.831404 21339 1 76 0.00239126 140 0 6.02115e+07 0.0229173 567438 6.07104e+07 5.66162e+06 21357 2.99459e+07 0 0.145367 0.991783 0.824573 6.02115e+07 0.00349896 1.31922e+07 6.8179e+06 1.32868e+07 156 1.32852e+07 9.84328e+06 0.00294422 1.32827e+07 49.9953 0.00934664 0.993371 0 50.1787 GTEX-17F97-2626-SM-7IGM5 1 C1 6 pieces; well trimmed; 5% dermal fat 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 979 712 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994155 335190 0.978215 0.994751 0.82903 24014 1 76 0.00213855 383 0 1.32089e+08 0.0215424 1.04148e+06 1.32786e+08 8.35429e+06 24058 6.58473e+07 0 0.149185 0.994751 0.824678 1.32089e+08 0.00274625 2.89504e+07 1.53513e+07 2.93826e+07 370 2.92794e+07 2.01238e+07 0.00244222 2.91238e+07 49.8668 0.00784329 0.995347 0 50.3704 GTEX-17F97-2726-SM-7IGQ4 2 C1 2 pieces; extensively hyalinized, minimal spermatogenesis 6 Testis Testis 0000473 981 711 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 EXCLUDE 0.99505 135916 0.964814 0.995248 0.779832 25848 1 76 0.00196456 153 0 6.4891e+07 0.0349636 1.78245e+06 6.52009e+07 2.41082e+06 25881 3.23423e+07 0 0.184982 0.995248 0.776126 6.4891e+07 0.00241702 1.42652e+07 6.75007e+06 1.43841e+07 166 1.43854e+07 8.69232e+06 0.00219074 1.42773e+07 49.8113 0.0273378 0.995445 0 50.2075 GTEX-17F97-2926-SM-7DUEQ 2 C1 4 pieces 7.4 Brain Brain - Cerebellum 0002037 986 707 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992608 387019 0.946798 0.993478 0.706052 24595 1 76 0.00300758 199 0 9.48134e+07 0.0527678 1.2324e+06 9.54358e+07 7.72625e+06 24639 4.72149e+07 0 0.240746 0.993478 0.701446 9.48134e+07 0.00414337 2.05041e+07 1.40434e+07 2.0644e+07 251 2.07136e+07 1.2086e+07 0.00357498 2.05082e+07 49.7508 0.0129134 0.994347 0 50.1699 GTEX-17F97-3026-SM-79OKC 2 C1 4pieces 7.1 Brain Brain - Cortex 0001870 987 706 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980973 241231 0.963094 0.984491 0.828156 23163 1 76 0.00464595 124 0 5.8717e+07 0.0365402 2.34550e+06 5.9642e+07 1.29351e+07 23175 2.92149e+07 0 0.134938 0.984491 0.815312 5.8717e+07 0.00586855 1.28093e+07 1.01629e+07 1.29655e+07 150 1.29961e+07 6.94626e+06 0.00525506 1.29639e+07 49.938 0.0393264 0.988009 0 50.3029 GTEX-17F98-0003-SM-6RBKG B1 Blood Whole Blood 0013756 -220 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17F98-0003-SM-6UH28 B1 Blood Whole Blood 0013756 -220 BP-50764 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/21/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17F98-0008-SM-EAZBA B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 275 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992885 694916 0.969689 0.993914 0.853039 20558 1 76 0.00166598 296 0 1.08554e+08 0.0299639 230424 1.09219e+08 7.84443e+06 20577 5.41073e+07 0 0.11665 0.993914 0.847847 1.08554e+08 0.00270961 2.40682e+07 2.46763e+07 2.43251e+07 282 2.43538e+07 2.81446e+07 0.00218725 2.41524e+07 49.7925 0.00210974 0.994944 0 50.2653 GTEX-17F98-0126-SM-7MGW3 1 B1 2 pieces; not congested 5.7 Spleen Spleen 0002106 213 701 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.986939 192671 0.960438 0.989405 0.783927 23909 1 76 0.00324696 135 0 6.80531e+07 0.0384106 385895 6.87818e+07 5.48622e+06 23937 3.38414e+07 0 0.176512 0.989405 0.775622 6.80531e+07 0.00418164 1.48525e+07 9.88803e+06 1.49614e+07 156 1.49858e+07 9.57347e+06 0.00371313 1.4984e+07 49.997 0.00561042 0.991871 0 50.1825 GTEX-17F98-0226-SM-793BV 1 B1 2 pieces; patchy emphysema; no exudates or hyperemia 7.6 Lung Lung 0008952 223 691 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993772 269650 0.974282 0.994859 0.812205 23729 1 76 0.00305608 163 0 7.69732e+07 0.0253357 257276 7.7371e+07 1.0964e+07 23757 3.83625e+07 0 0.162077 0.994859 0.808029 7.69732e+07 0.00347468 1.71145e+07 6.73749e+06 1.72257e+07 183 1.72778e+07 1.37805e+07 0.00326515 1.71423e+07 49.8032 0.00332522 0.995946 0 50.1619 GTEX-17F98-0326-SM-7DHLH 0 B1 2 pieces; <5% fibrovascular content 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 228 686 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989761 109756 0.977244 0.990743 0.830716 21704 1 76 0.00352116 148 0 6.61471e+07 0.0224552 234357 6.67652e+07 5.58558e+06 21718 3.2908e+07 0 0.146528 0.990743 0.823027 6.61471e+07 0.00539589 1.45651e+07 5.42122e+06 1.46722e+07 154 1.46786e+07 1.19162e+07 0.00445759 1.46189e+07 49.8982 0.00351017 0.991725 0 50.1832 GTEX-17F98-0426-SM-79ONZ 1 B1 2 pieces; 25% internal & external fat in 1 piece; other has <5% fat 6.7 Pancreas Pancreas 0001150 234 680 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994469 124616 0.9789 0.9949 0.85409 19885 1 76 0.00339324 90 0 5.76172e+07 0.0207654 83074 5.79125e+07 3.14108e+06 19897 2.87228e+07 0 0.12481 0.9949 0.849734 5.76172e+07 0.00468544 1.32609e+07 1.34646e+07 1.34707e+07 100 1.34402e+07 1.69533e+07 0.00403906 1.33162e+07 49.7682 0.00143447 0.99533 0 50.3925 GTEX-17F98-0526-SM-79OK5 0 B1 2 pieces; 1 small focus of ducts [circled]; 5% fibrovascular content 7.2 Breast Breast - Mammary Tissue 0008367 240 674 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976103 199714 0.975153 0.980213 0.807819 23239 1 76 0.00516951 131 0 6.3494e+07 0.0243887 163101 6.47757e+07 1.49049e+07 23259 3.15746e+07 0 0.167333 0.980213 0.791835 6.3494e+07 0.00666397 1.39225e+07 6.51041e+06 1.40346e+07 137 1.41056e+07 1.12567e+07 0.00591361 1.40989e+07 49.9881 0.00251793 0.984322 0 50.2005 GTEX-17F98-0626-SM-79OMX 0 B1 6 pieces; excessive subcutaneous fat on all pieces, up to 2 mm thick & up to 40% surface area 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 274 640 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991565 133498 0.972265 0.991422 0.815401 22755 1 76 0.00310597 148 0 6.0441e+07 0.0275263 318867 6.0964e+07 3.75945e+06 22774 3.00972e+07 0 0.156864 0.991422 0.808407 6.0441e+07 0.00449773 1.33144e+07 6.03513e+06 1.34146e+07 145 1.34003e+07 1.06084e+07 0.00380195 1.33274e+07 49.8636 0.00523042 0.991279 0 50.1875 GTEX-17F98-0726-SM-793BJ 0 B1 6 pieces; well trimmed; minimal thin plaques 7.8 Blood Vessel Artery - Aorta 0001496 283 631 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994809 219234 0.976554 0.995874 0.842414 22041 1 76 0.00283273 162 0 7.42183e+07 0.0230886 134495 7.45258e+07 1.06916e+07 22057 3.70022e+07 0 0.134141 0.995874 0.838938 7.42183e+07 0.00324844 1.60446e+07 5.54098e+06 1.60886e+07 171 1.6093e+07 1.46703e+07 0.00304036 1.61165e+07 50.0365 0.00180468 0.996938 0 50.0684 GTEX-17F98-0826-SM-7DUF7 0 B1 2 pieces; 10 & 30 % external fat 7.2 Nerve Nerve - Tibial 0001323 292 622 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992461 319351 0.967313 0.993221 0.759699 25134 1 76 0.00279472 297 0 1.05662e+08 0.0323939 358688 1.06383e+08 9.71862e+06 25182 5.26162e+07 0 0.207614 0.993221 0.75455 1.05662e+08 0.00418715 2.32256e+07 9.3722e+06 2.33661e+07 276 2.33996e+07 1.72996e+07 0.00349041 2.32721e+07 49.8634 0.00337167 0.993982 0 50.1508 GTEX-17F98-0926-SM-7DHLT 0 B1 2 pieces; no lesions; well trimmed 8.4 Blood Vessel Artery - Tibial 0007610 294 620 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990985 125570 0.977435 0.992276 0.871817 20445 1 76 0.00345216 151 0 7.35851e+07 0.0221238 219959 7.41579e+07 6.0404e+06 20453 3.66212e+07 0 0.105618 0.992276 0.865083 7.35851e+07 0.0053962 1.56311e+07 5.06424e+06 1.58795e+07 162 1.58523e+07 1.6114e+07 0.00442292 1.57417e+07 49.825 0.00296609 0.993567 0 50.3942 GTEX-17F98-1026-SM-7IGO8 2 B1 6 pieces; poorly preserved mucosa; edematous submucosa occupies 60% 5.8 Colon Colon - Transverse 0001157 294 620 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.992959 407929 0.972016 0.993272 0.817914 24363 1 76 0.0024924 172 0 7.83349e+07 0.0254907 471497 7.88655e+07 2.84626e+06 24397 3.89338e+07 0 0.154102 0.993272 0.812412 7.83349e+07 0.00299195 1.73427e+07 8.91099e+06 1.74911e+07 195 1.75515e+07 1.32778e+07 0.00274209 1.73022e+07 49.6424 0.0059785 0.993586 0 50.213 GTEX-17F98-1126-SM-79OJS 1 B1 2 pieces; 30% fibrous & neural content in 1 piece, other has 5% same 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 300 614 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977887 187374 0.977895 0.981606 0.826649 22343 1 76 0.00504025 150 0 6.50041e+07 0.0217939 266280 6.62223e+07 1.53672e+07 22358 3.23523e+07 0 0.151246 0.981606 0.811443 6.50041e+07 0.00620177 1.42781e+07 6.20288e+06 1.43611e+07 144 1.4428e+07 1.18878e+07 0.00561881 1.44378e+07 50.0169 0.004021 0.985324 0 50.145 GTEX-17F98-1326-SM-7DUEP 1 B1 6 pieces; well trimmed subcutaneous tissue 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 304 610 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993271 181255 0.973574 0.993957 0.817783 22391 1 76 0.00271877 155 0 5.21359e+07 0.026189 243421 5.24529e+07 4.56974e+06 22410 2.59831e+07 0 0.15579 0.993957 0.812842 5.21359e+07 0.00390023 1.14518e+07 5.74846e+06 1.15133e+07 120 1.1551e+07 9.85637e+06 0.00330909 1.14504e+07 49.7813 0.00464075 0.994643 0 50.134 GTEX-17F98-1526-SM-7EWD8 2 B1 6 pieces; all have only mucosa and submucosa, no muscularis propria; basal glandular dilatation 6.4 Stomach Stomach 0000945 314 600 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.986402 144132 0.980982 0.988196 0.839321 22854 1 76 0.00216106 266 0 7.28067e+07 0.0185532 88905 7.36763e+07 6.46403e+06 22872 3.6259e+07 0 0.14166 0.988196 0.829414 7.28067e+07 0.00313129 1.67516e+07 6.64271e+07 1.69462e+07 185 1.69708e+07 2.12724e+07 0.0026453 1.68544e+07 49.8279 0.0012067 0.98999 0 50.2887 GTEX-17F98-1626-SM-7938R 1 B1 2 pieces; minimal internal & external fat 8.6 Muscle Muscle - Skeletal 0011907 318 596 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.995539 197319 0.982382 0.996404 0.881163 18520 1 76 0.00210738 142 0 6.07061e+07 0.0173583 471048 6.09252e+07 4.01069e+06 18525 3.02711e+07 0 0.10122 0.996404 0.877995 6.07061e+07 0.00253423 1.32377e+07 5.53015e+06 1.3359e+07 148 1.33916e+07 1.24372e+07 0.00232062 1.32486e+07 49.7316 0.00773158 0.99727 0 50.2281 GTEX-17F98-1726-SM-7938O 1 B1 6 pieces; prominent submucosal glands in most pieces 8.5 Esophagus Esophagus - Mucosa 0006920 320 594 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994224 346225 0.974307 0.994816 0.835031 21305 1 76 0.00185575 124 0 5.35669e+07 0.0253411 143391 5.3846e+07 2.32654e+06 21317 2.66832e+07 0 0.139276 0.994816 0.830702 5.35669e+07 0.00228643 1.20053e+07 6.18639e+06 1.20478e+07 124 1.21293e+07 1.13422e+07 0.00207096 1.19538e+07 49.6356 0.00266298 0.995409 0 50.0883 GTEX-17F98-1826-SM-7DUFK 1 B1 6 pieces; well dissected muscle 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 325 589 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992085 393837 0.972978 0.993121 0.833165 23121 1 76 0.00276596 217 0 9.20083e+07 0.0267651 346565 9.26455e+07 8.34937e+06 23142 4.57991e+07 0 0.139814 0.993121 0.827433 9.20083e+07 0.00439057 1.98846e+07 8.07829e+06 2.00925e+07 232 2.00993e+07 1.61309e+07 0.00357742 1.99693e+07 49.8377 0.00374076 0.994158 0 50.26 GTEX-17F98-1926-SM-7DHLW 1 B1 6 pieces; well dissected muscle 8.3 Esophagus Esophagus - Muscularis 0004648 320 594 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991941 106491 0.975234 0.993199 0.838603 21784 1 76 0.0035726 177 0 7.84579e+07 0.0244688 242415 7.89951e+07 6.08149e+06 21801 3.9081e+07 0 0.136631 0.993199 0.8329 7.84579e+07 0.00519765 1.68074e+07 6.07943e+06 1.70116e+07 181 1.70197e+07 1.48399e+07 0.0043841 1.68885e+07 49.8066 0.00306873 0.994458 0 50.302 GTEX-17F9E-0003-SM-6RBKR B1 Blood Whole Blood 0013756 -86 BP-50818 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/24/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17F9E-0003-SM-6UH2B B1 Blood Whole Blood 0013756 -86 BP-50818 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/24/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17F9E-0008-SM-EAZB5 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 216 BP-53459 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99348 239358 0.980154 0.994313 0.854816 20475 1 76 0.00176639 155 0 7.81679e+07 0.0195168 391074 7.86149e+07 5.84843e+06 20489 3.89818e+07 0 0.125338 0.994313 0.849955 7.81679e+07 0.00267099 1.77054e+07 8.01246e+06 1.77523e+07 160 1.77402e+07 2.14966e+07 0.00221831 1.77805e+07 50.0567 0.00497455 0.995146 0 50.0662 GTEX-17F9E-0226-SM-79OKK 0 B1 2 pieces, ~15% interstitial fat/vascular elements, rep. delineated 7.2 Muscle Muscle - Skeletal 0011907 234 550 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980852 274260 0.985152 0.984422 0.881881 18881 1 76 0.0047156 145 0 6.56225e+07 0.0145909 785271 6.6661e+07 1.47681e+07 18883 3.26602e+07 0 0.103271 0.984422 0.868143 6.56225e+07 0.00583056 1.40883e+07 9.8292e+06 1.43608e+07 152 1.43993e+07 1.26421e+07 0.00527106 1.42528e+07 49.7444 0.0117801 0.987992 0 50.479 GTEX-17F9E-0426-SM-7IGP1 0 B1 2 pieces. trace adherent fat, good specimnes 5.7 Nerve Nerve - Tibial 0001323 253 531 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994528 128352 0.967921 0.994694 0.754612 22813 1 76 0.00205037 136 0 6.07557e+07 0.0318641 591909 6.10798e+07 2.49352e+06 22845 3.028e+07 0 0.213309 0.994694 0.750608 6.07557e+07 0.00249708 1.33325e+07 5.54145e+06 1.35581e+07 148 1.35122e+07 7.79581e+06 0.00227369 1.33879e+07 49.769 0.00969075 0.994859 0 50.4194 GTEX-17F9E-0526-SM-7DUFD 0 B1 2 pieces, trace rim of fibrous tissue 7.3 Blood Vessel Artery - Tibial 0007610 260 524 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992509 298278 0.972752 0.993203 0.818789 22278 1 76 0.00274299 215 0 9.28059e+07 0.0268554 505759 9.3441e+07 8.6087e+06 22300 4.62044e+07 0 0.153963 0.993203 0.813224 9.28059e+07 0.00411908 2.00289e+07 8.08e+06 2.01691e+07 243 2.01898e+07 1.65927e+07 0.00343055 2.00729e+07 49.8548 0.0054126 0.993897 0 50.1743 GTEX-17F9E-0626-SM-79ON5 1 B1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 264 520 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992967 135454 0.967955 0.993094 0.755971 22896 1 76 0.00311811 113 0 5.63967e+07 0.0317733 206332 5.67889e+07 3.27442e+06 22921 2.8091e+07 0 0.211984 0.993094 0.75075 5.63967e+07 0.00440974 1.23799e+07 5.04682e+06 1.2444e+07 125 1.24418e+07 8.25686e+06 0.00376385 1.23863e+07 49.8882 0.00363332 0.99322 0 50.129 GTEX-17F9E-0726-SM-793A1 0 B1 2 pieces, no abnormalities 8.6 Heart Heart - Atrial Appendage 0006631 268 516 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991564 514808 0.977294 0.992903 0.832422 20961 1 76 0.00231222 122 0 5.6621e+07 0.0224324 1.10865e+06 5.70257e+07 4.98639e+06 20974 2.81163e+07 0 0.144872 0.992903 0.826515 5.6621e+07 0.00302673 1.24223e+07 7.09913e+06 1.2451e+07 149 1.25848e+07 8.53549e+06 0.00266899 1.23522e+07 49.5336 0.0194413 0.994243 0 50.0577 GTEX-17F9E-0926-SM-7IGMG 1 B1 2 pieces cardiac muscle (heart), switched with -1025 6.1 Heart Heart - Left Ventricle 0006566 282 502 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994284 268740 0.983275 0.995406 0.851212 19383 1 76 0.00221375 148 0 6.52599e+07 0.0165732 2.15259e+06 6.55611e+07 4.22105e+06 19397 3.25128e+07 0 0.132063 0.995406 0.847301 6.52599e+07 0.00285318 1.41431e+07 1.42835e+07 1.47335e+07 190 1.45983e+07 7.70132e+06 0.00253311 1.43256e+07 49.5285 0.0328333 0.996528 0 51.0223 GTEX-17F9E-1026-SM-7DUF1 1 B1 6 pieces, target gastroesophageal junction muscularis, switched with -0925 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 278 506 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992012 542431 0.974162 0.99291 0.80392 23334 1 76 0.00275885 279 0 1.03823e+08 0.0255689 918079 1.04564e+08 9.30168e+06 23369 5.16884e+07 0 0.170243 0.99291 0.79822 1.03823e+08 0.00421876 2.25874e+07 1.18148e+07 2.28452e+07 307 2.29547e+07 1.68335e+07 0.00348815 2.25697e+07 49.5772 0.00878005 0.993807 0 50.2837 GTEX-17F9E-1126-SM-79OMO 1 B1 2 pieces, no abnormalities 6.6 Spleen Spleen 0002106 290 494 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991567 202358 0.959045 0.991758 0.745239 23667 1 76 0.00368191 118 0 6.22e+07 0.0397351 320702 6.27169e+07 3.49787e+06 23700 3.09431e+07 0 0.213806 0.991758 0.739096 6.22e+07 0.00499666 1.36454e+07 1.00314e+07 1.37349e+07 134 1.37468e+07 8.86544e+06 0.00433916 1.36464e+07 49.8167 0.00511349 0.991948 0 50.1635 GTEX-17F9E-1226-SM-7EWDG 1 B1 2 pieces, minimal atherosis. ~2.5mm nubbin of adherent fat, delineated 6.3 Blood Vessel Artery - Coronary 0001621 298 486 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990668 86227 0.972607 0.992607 0.814354 21744 1 76 0.0023567 135 0 6.20615e+07 0.0271176 544275 6.25237e+07 5.1689e+06 21764 3.08784e+07 0 0.158253 0.992607 0.808333 6.20615e+07 0.00367512 1.34405e+07 4.96359e+06 1.35672e+07 153 1.35432e+07 1.00245e+07 0.00301463 1.35757e+07 50.0599 0.00870509 0.994547 0 50.2345 GTEX-17F9E-1326-SM-7DHL4 1 B1 2 pieces 15% fascia/vascular elements, rep delineated 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 295 489 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989307 179833 0.975937 0.990242 0.8 23486 1 76 0.00358777 167 0 8.41995e+07 0.0237934 350901 8.50292e+07 7.01121e+06 23512 4.18693e+07 0 0.175937 0.990242 0.792194 8.41995e+07 0.00550162 1.84878e+07 7.2986e+06 1.87038e+07 196 1.87131e+07 1.37859e+07 0.00454379 1.85530e+07 49.7853 0.00412683 0.991177 0 50.2904 GTEX-17F9E-1426-SM-793BG 1 B1 2 pieces, ~50% adherent/insterstitial fat, delineated. Islets well preserved, rep encircled 7.7 Pancreas Pancreas 0001150 300 484 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995406 316267 0.974625 0.996414 0.827823 21887 1 76 0.003016 108 0 8.49479e+07 0.0249661 153258 8.52537e+07 1.22529e+07 21911 4.2351e+07 0 0.146802 0.996414 0.824854 8.49479e+07 0.0033679 1.95238e+07 2.45004e+07 1.96777e+07 129 1.96589e+07 2.51083e+07 0.00319177 1.96282e+07 49.961 0.00179767 0.997421 0 50.1963 GTEX-17F9E-1626-SM-7EWDB 2 B1 2 pieces, spermatogenesis appears reduced 6.3 Testis Testis 0000473 306 478 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990627 157007 0.931043 0.992371 0.69454 31300 1 76 0.00256879 124 0 6.03582e+07 0.0686952 771630 6.08222e+07 5.2443e+06 31350 3.00635e+07 0 0.236503 0.992371 0.689241 6.03582e+07 0.00341889 1.26333e+07 8.05671e+06 1.26518e+07 121 1.26898e+07 8.39662e+06 0.00299309 1.26859e+07 49.9924 0.0126866 0.994115 0 50.0367 GTEX-17F9E-1826-SM-7IGMC 2 B1 6 pieces, mucosa up to ~0.25mm, moderately advanced autolysis 6 Colon Colon - Transverse 0001157 319 465 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99473 269677 0.974481 0.995603 0.829123 23012 1 76 0.00214484 211 0 8.30172e+07 0.0248584 429916 8.33838e+07 5.13107e+06 23034 4.13747e+07 0 0.145358 0.995603 0.825477 8.30172e+07 0.00288287 1.80166e+07 7.89137e+06 1.83143e+07 230 1.82682e+07 1.41421e+07 0.00251353 1.81317e+07 49.8125 0.00515587 0.996477 0 50.4097 GTEX-17F9E-1926-SM-7IGQF 1 B1 6 pieces, squamous mucosa is ~0.15mm, ~2-5% thickness 5.9 Esophagus Esophagus - Mucosa 0006920 321 463 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994779 281042 0.976726 0.995092 0.8321 22476 1 76 0.00215908 154 0 7.28807e+07 0.0224077 244421 7.32402e+07 2.33608e+06 22492 3.63068e+07 0 0.144626 0.995092 0.828016 7.28807e+07 0.00268765 1.6242e+07 7.86713e+06 1.64e+07 174 1.63739e+07 1.34753e+07 0.00242328 1.62926e+07 49.8756 0.00333725 0.995405 0 50.242 GTEX-17F9E-2126-SM-7DUFG 1 B1 6 pieces, confirmed target muscularis 7.3 Esophagus Esophagus - Muscularis 0004648 331 453 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993385 195314 0.976684 0.994132 0.826416 23009 1 76 0.00273594 277 0 9.93495e+07 0.0230312 891271 9.9936e+07 8.70126e+06 23029 4.95267e+07 0 0.150267 0.994132 0.821566 9.93495e+07 0.00385689 2.1548e+07 9.51558e+06 2.18275e+07 283 2.18222e+07 1.63604e+07 0.00329599 2.16197e+07 49.767 0.00891842 0.994878 0 50.3222 GTEX-17F9E-2226-SM-7IGNC 1 B1 6 pieces, mucosa well preserved, up to ~0.8mm, ~20-25% thickness 6.2 Stomach Stomach 0000945 335 449 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.98861 158273 0.978433 0.989562 0.84473 21769 1 76 0.00250437 251 0 6.72136e+07 0.0206228 1.42527e+06 6.79226e+07 4.42591e+06 21782 3.34753e+07 0 0.133703 0.989562 0.835912 6.72136e+07 0.0030823 1.52373e+07 5.21714e+07 1.56516e+07 195 1.56323e+07 1.39097e+07 0.00279306 1.53162e+07 49.4893 0.0209838 0.990513 0 50.6707 GTEX-17F9E-2326-SM-79OKD 0 B1 6 pieces, trace adherent fat, elineated; squamous epithelium is ~50-60 microns 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 341 443 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.974239 199682 0.972536 0.978487 0.801986 22802 1 76 0.00523389 138 0 6.10195e+07 0.0272601 587479 6.23611e+07 1.46771e+07 22823 3.03481e+07 0 0.17055 0.978487 0.784733 6.10195e+07 0.00676907 1.34032e+07 8.16876e+06 1.35717e+07 140 1.36157e+07 9.46669e+06 0.00599815 1.36045e+07 49.9795 0.0094206 0.982735 0 50.3124 GTEX-17F9E-2526-SM-7MGW2 1 B1 2 pieces, fibroadipose elements only 5.7 Breast Breast - Mammary Tissue 0008367 360 424 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990864 115642 0.976395 0.992696 0.827971 21336 1 76 0.00284087 135 0 6.27822e+07 0.0233665 868942 6.32442e+07 4.56462e+06 21356 3.12739e+07 0 0.148424 0.992696 0.821923 6.27822e+07 0.00357869 1.38032e+07 6.66496e+06 1.40416e+07 164 1.39875e+07 8.34484e+06 0.0032091 1.39614e+07 49.9533 0.0137395 0.994528 0 50.4281 GTEX-17F9E-5001-SM-AN44R B1 Muscle Muscle - Skeletal 0011907 232 ChIP-Seq GTEX-17F9E-5007-SM-AN44S B1 Heart Heart - Left Ventricle 0006566 284 ChIP-Seq GTEX-17F9Y-0004-SM-6RBJW C1 Blood Whole Blood 0013756 433 BP-50939 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17F9Y-0004-SM-6UH1O C1 Blood Whole Blood 0013756 433 BP-50939 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/28/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17F9Y-0008-SM-EAZBC C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 523 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99182 1.21583e+06 0.942666 0.992834 0.788692 23634 1 76 0.00174607 299 0 1.30681e+08 0.0569629 365265 1.31624e+08 9.89942e+06 23660 6.51408e+07 0 0.153974 0.992834 0.78304 1.30681e+08 0.00254539 2.82534e+07 5.9637e+07 2.8672e+07 306 2.86791e+07 3.17432e+07 0.00214533 2.83848e+07 49.7422 0.00277506 0.993847 0 50.3676 GTEX-17F9Y-0126-SM-79OKX 0 C1 6 pieces, trace adherent fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 440 1064 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.981187 247527 0.975369 0.984773 0.751211 21903 1 76 0.00464409 137 0 6.05091e+07 0.0244164 546264 6.14447e+07 1.21558e+07 21922 3.01013e+07 0 0.224158 0.984773 0.739772 6.05091e+07 0.00600182 1.32832e+07 7.903e+06 1.33224e+07 128 1.34053e+07 9.01073e+06 0.00532049 1.34059e+07 50.0011 0.00889034 0.988359 0 50.0736 GTEX-17F9Y-0326-SM-7IGLS 0 C1 2 pieces, trace fascia 6 Adipose Tissue Adipose - Subcutaneous 0002190 524 981 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994645 237297 0.976481 0.995188 0.768144 22898 1 76 0.00216196 167 0 7.75407e+07 0.0230655 553092 7.79156e+07 4.59715e+06 22925 3.86356e+07 0 0.208337 0.995188 0.764448 7.75407e+07 0.00258286 1.71405e+07 7.36971e+06 1.72668e+07 182 1.72468e+07 1.27792e+07 0.00237229 1.72055e+07 49.94 0.0070986 0.995731 0 50.1835 GTEX-17F9Y-0526-SM-7EWDC 1 C1 2 pieces, few colloid cysts 6.3 Thyroid Thyroid 0002046 530 976 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990274 101901 0.962616 0.992265 0.742357 23290 1 76 0.00237283 120 0 5.41372e+07 0.0371113 756685 5.45592e+07 4.48098e+06 23311 2.69305e+07 0 0.220259 0.992265 0.736615 5.41372e+07 0.00369387 1.18016e+07 6.47937e+06 1.18348e+07 123 1.185e+07 8.61825e+06 0.00303203 1.18895e+07 50.0833 0.0138691 0.994256 0 50.0702 GTEX-17F9Y-0726-SM-7LT9G 1 C1 2 pieces, interstital fasca/vascular elements are ~20% 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 534 973 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989568 493743 0.971254 0.992121 0.786174 25612 1 76 0.00274129 285 0 1.44701e+08 0.0283965 1.80661e+06 1.4585e+08 1.60101e+07 25658 7.19223e+07 0 0.185081 0.992121 0.779979 1.44701e+08 0.00374519 3.16219e+07 2.47744e+07 3.19484e+07 324 3.21195e+07 2.43966e+07 0.00324194 3.18107e+07 49.7585 0.0123868 0.994674 0 50.2567 GTEX-17F9Y-0826-SM-7LG52 0 C1 2 pieces, ~20-30% luminal atherotic occlusion, delineated; no adherent fat 7 Blood Vessel Artery - Tibial 0007610 537 970 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977403 340587 0.974858 0.984928 0.779886 23443 1 76 0.00367447 170 0 8.91693e+07 0.024746 462048 9.05338e+07 1.38387e+07 23469 4.40621e+07 0 0.194971 0.984928 0.768132 8.91693e+07 0.00581482 1.92812e+07 9.97019e+06 1.95534e+07 193 1.9874e+07 1.60841e+07 0.00473647 1.96e+07 49.6529 0.0051036 0.992454 0 50.3505 GTEX-17F9Y-0926-SM-79OJU 0 C1 2 pieces, good specimen, trace adherent fat 7.2 Nerve Nerve - Tibial 0001323 539 969 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.980292 162643 0.968484 0.98383 0.718166 23024 1 76 0.00500219 145 0 6.06308e+07 0.0312236 205229 6.16273e+07 1.32032e+07 23054 3.01646e+07 0 0.250319 0.98383 0.706553 6.06308e+07 0.0061692 1.33618e+07 6.39324e+06 1.3385e+07 121 1.3455e+07 9.10696e+06 0.0055836 1.34933e+07 50.0711 0.00333017 0.987368 0 50.0434 GTEX-17F9Y-1026-SM-7IGO4 2 C1 2 pieces, moderate congestion 5.9 Lung Lung 0008952 540 968 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993475 373003 0.972816 0.993667 0.783302 23280 1 76 0.00198014 156 0 7.20498e+07 0.0268538 617143 7.2509e+07 2.81514e+06 23308 3.58758e+07 0 0.189514 0.993667 0.778342 7.20498e+07 0.00247794 1.5961e+07 9.69176e+06 1.60628e+07 169 1.61291e+07 1.24734e+07 0.00222899 1.59135e+07 49.6636 0.00851126 0.993858 0 50.1589 GTEX-17F9Y-1226-SM-7EPGE 1 C1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 542 967 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.992126 135259 0.977133 0.994332 0.812476 22663 1 76 0.00278801 192 0 1.06788e+08 0.0225881 4.5126e+06 1.07397e+08 1.40376e+07 22685 5.32286e+07 0 0.164657 0.994332 0.807871 1.06788e+08 0.0110543 2.25746e+07 1.49305e+07 2.3003e+07 207 2.3016e+07 1.55292e+07 0.006912 2.27657e+07 49.7267 0.0420181 0.996538 0 50.4699 GTEX-17F9Y-1326-SM-7MGW9 1 C1 2 pieces, moderate chronic ischemic damage/ interstitial fibrosis 5.7 Heart Heart - Left Ventricle 0006566 544 966 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.99051 94215 0.984681 0.993056 0.878232 18148 1 76 0.00234401 142 0 5.46152e+07 0.0152536 3.61514e+06 5.49971e+07 4.18171e+06 18152 2.72032e+07 0 0.106448 0.993056 0.872134 5.46152e+07 0.00336679 1.22721e+07 9.54956e+06 1.2544e+07 189 1.24496e+07 3.33506e+06 0.00285409 1.2476e+07 50.053 0.0657332 0.995602 0 50.5478 GTEX-17F9Y-1426-SM-7IGOO 1 C1 2 pieces, one with subtotally occlusive atherosis, delineated 5.9 Blood Vessel Artery - Coronary 0001621 546 964 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993542 142257 0.970896 0.993627 0.779704 21751 1 76 0.00201684 128 0 5.95792e+07 0.0288314 712497 5.99613e+07 2.45884e+06 21773 2.9683e+07 0 0.191192 0.993627 0.774735 5.95792e+07 0.00236377 1.29708e+07 7.44058e+06 1.31609e+07 143 1.31363e+07 9.99992e+06 0.00219029 1.30066e+07 49.752 0.0118826 0.993713 0 50.3638 GTEX-17F9Y-1826-SM-7IGMI 1 C1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 550 963 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994403 330963 0.970131 0.995144 0.804633 23739 1 76 0.00208548 272 0 9.6975e+07 0.0296402 1.03136e+06 9.74482e+07 6.38152e+06 23763 4.83273e+07 0 0.165498 0.995144 0.800726 9.6975e+07 0.00266175 2.10991e+07 9.93006e+06 2.13855e+07 327 2.13299e+07 1.41052e+07 0.0023734 2.12273e+07 49.8795 0.0105837 0.995884 0 50.337 GTEX-17F9Y-2326-SM-7DUFP 2 C1 6 pieces, squamous mucosa sloughing 7.4 Vagina Vagina 0000996 561 957 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442,LCSET-6865 02/18/2015 TruSeq.v1 RNASEQ 0.990755 684830 0.972027 0.992351 0.742008 25008 1 76 0.00254042 383 0 1.29716e+08 0.0276705 452836 1.30716e+08 9.76213e+06 25051 6.45683e+07 0 0.230018 0.992351 0.736333 1.29716e+08 0.00345138 2.90032e+07 2.09999e+07 2.90621e+07 343 2.92913e+07 2.25992e+07 0.00299517 2.89846e+07 49.7369 0.00346428 0.993947 0 50.0507 GTEX-17F9Y-2626-SM-7IGN9 1 C1 6 pieces all muscularis 6 Colon Colon - Sigmoid 0001159 570 949 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993897 135613 0.971208 0.994752 0.802117 22659 1 76 0.0019859 144 0 6.58456e+07 0.0285305 627008 6.6193e+07 3.91887e+06 22673 3.28171e+07 0 0.16909 0.994752 0.797908 6.58456e+07 0.00289058 1.42681e+07 7.33642e+06 1.44268e+07 160 1.43911e+07 1.09127e+07 0.00243785 1.43633e+07 49.9516 0.00947243 0.995607 0 50.2765 GTEX-17GQL-0003-SM-6RBKD B1 Blood Whole Blood 0013756 -60 BP-50939 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17GQL-0003-SM-6UH25 B1 Blood Whole Blood 0013756 -60 BP-50939 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/28/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17GQL-0005-SM-7MKF4 B1 6.9 Blood Whole Blood 0013756 -60 BP-50944 RNA isolation_PAXgene Blood RNA (Manual) 03/28/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981276 1.18456e+06 0.933498 0.9864 0.779528 17308 1 76 0.0035228 105 0 7.05915e+07 0.0659651 345032 7.15648e+07 9.89685e+06 17314 3.50225e+07 0 0.15397 0.9864 0.768927 7.05915e+07 0.00551024 1.52842e+07 9.44246e+07 1.538e+07 116 1.54574e+07 1.60382e+07 0.00451136 1.55914e+07 50.2157 0.00482125 0.991523 0 50.1562 GTEX-17GQL-0126-SM-72D5Q 1 B1 2 pieces, no abnormalities 7 Spleen Spleen 0002106 445 535 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.98963 220903 0.962838 0.990932 0.778382 24363 1 76 0.00326777 163 0 8.40352e+07 0.034923 486590 8.48041e+07 4.29838e+06 24388 4.1768e+07 0 0.184456 0.990932 0.771324 8.40352e+07 0.00403187 1.85118e+07 1.27398e+07 1.86503e+07 197 1.86842e+07 1.27278e+07 0.00364932 1.85823e+07 49.8633 0.00573781 0.992235 0 50.1863 GTEX-17GQL-0226-SM-7LTAK 1 B1 2 pieces, no abnormalities 6.4 Thyroid Thyroid 0002046 449 531 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990788 324550 0.963117 0.992914 0.735265 24351 1 76 0.00268717 205 0 8.10448e+07 0.0366504 382055 8.16232e+07 8.97483e+06 24395 4.03263e+07 0 0.227852 0.992914 0.730054 8.10448e+07 0.00347043 1.76445e+07 1.02571e+07 1.77661e+07 203 1.78746e+07 1.19276e+07 0.00307796 1.76931e+07 49.7448 0.00468072 0.99504 0 50.1717 GTEX-17GQL-0326-SM-7LG5U 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 6.7 Breast Breast - Mammary Tissue 0008367 452 528 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.985774 474117 0.976243 0.989679 0.823708 23381 1 76 0.00329522 276 0 9.51864e+07 0.0234689 693385 9.61791e+07 1.26064e+07 23404 4.7224e+07 0 0.152535 0.989679 0.815207 9.51864e+07 0.00508871 2.07615e+07 1.12173e+07 2.09101e+07 275 2.10867e+07 1.63296e+07 0.00418843 2.0931e+07 49.8147 0.00720931 0.993584 0 50.1782 GTEX-17GQL-0426-SM-7LG5V 1 B1 2 pieces, no significant atherosis 6.2 Blood Vessel Artery - Coronary 0001621 469 511 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.980849 620459 0.97484 0.985999 0.833698 23983 1 76 0.0026261 272 0 1.03628e+08 0.0248856 666677 1.05099e+08 1.12809e+07 24003 5.13513e+07 0 0.141142 0.985999 0.822025 1.03628e+08 0.00420154 2.25421e+07 1.49973e+07 2.26661e+07 327 2.28874e+07 1.80106e+07 0.0034097 2.28085e+07 49.9137 0.0063433 0.991149 0 50.1372 GTEX-17GQL-0526-SM-72D5N 1 B1 2 pieces, minimal chronic ischemic change 7.9 Heart Heart - Left Ventricle 0006566 458 522 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993256 167021 0.983775 0.995013 0.881881 20469 1 76 0.00234202 200 0 7.77912e+07 0.0159866 936877 7.81811e+07 4.32042e+06 20476 3.87635e+07 0 0.101894 0.995013 0.877483 7.77912e+07 0.00332816 1.68187e+07 6.72924e+06 1.70255e+07 207 1.70417e+07 1.59994e+07 0.00283422 1.69232e+07 49.8255 0.0119834 0.996771 0 50.3055 GTEX-17GQL-0626-SM-731CN 1 B1 2 pieces, no abnormalities 7.4 Heart Heart - Atrial Appendage 0006631 472 508 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.992755 177325 0.976347 0.994434 0.824818 22239 1 76 0.00264651 197 0 8.00065e+07 0.0234396 1.49288e+06 8.04543e+07 3.59091e+06 22256 3.98464e+07 0 0.151529 0.994434 0.820227 8.00065e+07 0.00285741 1.74324e+07 8.88116e+06 1.77758e+07 248 1.76823e+07 1.14698e+07 0.00275179 1.76348e+07 49.9327 0.0185556 0.996112 0 50.4876 GTEX-17GQL-0726-SM-731BL 1 B1 2 pieces moderate congestion/atalectasis 6 Lung Lung 0008952 475 505 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989114 119479 0.970432 0.990792 0.806238 23109 1 76 0.00299561 132 0 5.9777e+07 0.0292259 463685 6.03326e+07 3.12319e+06 23133 2.97183e+07 0 0.164194 0.990792 0.798814 5.9777e+07 0.00350773 1.31666e+07 4.885e+06 1.32761e+07 148 1.32768e+07 9.56906e+06 0.00325123 1.3261e+07 49.9702 0.00768548 0.99247 0 50.2071 GTEX-17GQL-0826-SM-731AM 1 B1 2 pieces, no abnormalities 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 478 502 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990337 211599 0.978138 0.992189 0.847399 21853 1 76 0.00273258 165 0 7.87209e+07 0.0215846 484480 7.93406e+07 3.39044e+06 21866 3.91857e+07 0 0.130739 0.992189 0.84078 7.87209e+07 0.00318228 1.72874e+07 6.41475e+06 1.74664e+07 200 1.74796e+07 1.42277e+07 0.00295701 1.74098e+07 49.9 0.00610633 0.994042 0 50.2575 GTEX-17GQL-0926-SM-731E7 0 B1 6 pieces, moderate adherent dermal fat, rep delineated; squamous epithelium is ~40-50 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 480 500 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6196 12/20/2014 TruSeq.v1 EXCLUDE 0.991549 284158 0.971411 0.993234 0.777338 23310 1 76 0.0032604 132 0 6.35065e+07 0.0282855 232825 6.39392e+07 7.7364e+06 23339 3.15915e+07 0 0.194073 0.993234 0.772078 6.35065e+07 0.00380573 1.39669e+07 5.44839e+06 1.39485e+07 139 1.40231e+07 1.10136e+07 0.0035326 1.39934e+07 49.9469 0.00364135 0.994918 0 49.9671 GTEX-17GQL-1126-SM-7KFSN 1 B1 6 pieces, mainly muscularis--focal squamous mucosa present 9.6 Esophagus Esophagus - Muscularis 0004648 485 495 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.991818 224792 0.977097 0.993581 0.853983 21542 1 76 0.00278733 158 0 7.30997e+07 0.0223794 304166 7.3572e+07 5.27249e+06 21554 3.6366e+07 0 0.123113 0.993581 0.848501 7.30997e+07 0.00308886 1.63406e+07 9.30369e+06 1.65287e+07 167 1.6548e+07 1.58119e+07 0.00293783 1.6451e+07 49.8531 0.00413427 0.995343 0 50.2862 GTEX-17GQL-1226-SM-7KFTS 1 B1 6 pieces, abundant well-preserved mucosa up to ~1mm, 50-100% of thickness 6.3 Stomach Stomach 0000945 489 491 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.99046 234791 0.978611 0.992575 0.835274 23522 1 76 0.00266654 401 0 1.03945e+08 0.021011 2.65038e+06 1.04723e+08 7.95562e+06 23543 5.1731e+07 0 0.143337 0.992575 0.829072 1.03945e+08 0.00279276 2.32101e+07 4.03911e+07 2.36659e+07 354 2.35479e+07 1.53373e+07 0.00272951 2.35158e+07 49.9658 0.0253086 0.994689 0 50.4862 GTEX-17GQL-1526-SM-7LTAC 1 B1 6 pieces, mucosa well preserved up to ~0.4mm, ~10-20% thickness 5.8 Colon Colon - Transverse 0001157 494 486 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98731 505478 0.965785 0.990849 0.803265 25351 1 76 0.00264822 274 0 1.09118e+08 0.0337246 1.6852e+06 1.10125e+08 1.2317e+07 25391 5.41875e+07 0 0.16252 0.990849 0.795915 1.09118e+08 0.00365358 2.35801e+07 2.25325e+07 2.3685e+07 297 2.38518e+07 1.38197e+07 0.0031491 2.37471e+07 49.8899 0.0153025 0.994387 0 50.1109 GTEX-17GQL-1626-SM-7LG69 1 B1 6 pieces, mainly muscularis, ~20% 'contaminant' mucosa 6.9 Colon Colon - Sigmoid 0001159 496 484 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.979989 520406 0.975384 0.98679 0.834883 24082 1 76 0.00328463 278 0 9.68424e+07 0.0242951 719199 9.81388e+07 1.4607e+07 24109 4.79132e+07 0 0.1405 0.98679 0.823855 9.68424e+07 0.00524807 2.07973e+07 1.23053e+07 2.09339e+07 266 2.12743e+07 1.73065e+07 0.00425959 2.10583e+07 49.745 0.00732838 0.993591 0 50.1637 GTEX-17GQL-1726-SM-718B8 1 B1 2 pieces, no abnormalities 6.8 Testis Testis 0000473 498 482 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968579 508265 0.921636 0.980922 0.707364 35123 1 76 0.00248579 289 0 1.15655e+08 0.0780347 1.04242e+06 1.17904e+08 5.1242e+06 35211 5.69388e+07 0 0.214272 0.980922 0.693868 1.15655e+08 0.00527119 2.36738e+07 1.65135e+07 2.36409e+07 276 2.43729e+07 1.81044e+07 0.00386096 2.42457e+07 49.8692 0.00884124 0.993265 0 49.9652 GTEX-17GQL-1926-SM-718B9 0 B1 2 pieces, focal peripheral nerve, delineated 8.3 Muscle Muscle - Skeletal 0011907 504 476 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.973796 375226 0.981048 0.984747 0.878292 25183 1 76 0.00207042 379 0 1.21583e+08 0.0186587 943673 1.23466e+08 5.37667e+06 25202 5.99784e+07 0 0.102756 0.984747 0.864895 1.21583e+08 0.00458327 2.61013e+07 1.12596e+07 2.61329e+07 331 2.68187e+07 2.61812e+07 0.00331287 2.67002e+07 49.8892 0.00764319 0.995697 0 50.0303 GTEX-17GQL-2026-SM-718BA 0 B1 6 pieces, minimal fat, squamous epithelium is ~60 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 508 472 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968424 358991 0.974095 0.981314 0.807598 24938 1 76 0.00242461 397 0 1.19311e+08 0.0256608 744246 1.21583e+08 5.47052e+06 24978 5.86992e+07 0 0.166497 0.981314 0.792508 1.19311e+08 0.0054247 2.59991e+07 1.16327e+07 2.59359e+07 352 2.67159e+07 2.06079e+07 0.00390495 2.67384e+07 50.021 0.0061213 0.994204 0 49.9391 GTEX-17GQL-2226-SM-718BB 0 B1 2 pieces, confirmed artery, adherent rim of fibrous tissue up to ~0.4mm 8 Blood Vessel Artery - Tibial 0007610 516 464 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.96671 295247 0.974792 0.980613 0.839577 23995 1 76 0.00233741 276 0 1.09128e+08 0.0247958 343428 1.11285e+08 5.20475e+06 24018 5.36037e+07 0 0.135215 0.980613 0.8233 1.09128e+08 0.00531486 2.33071e+07 8.77943e+06 2.32868e+07 330 2.39836e+07 2.15704e+07 0.00380503 2.40473e+07 50.0664 0.00308602 0.994517 0 49.9783 GTEX-17GQL-2326-SM-731EJ 1 B1 6 pieces, atherosis up to ~1mm, focally calcified adherent hemorrhagic fat/serosa 6 Blood Vessel Artery - Aorta 0001496 522 458 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991365 365558 0.973164 0.992843 0.81087 24876 1 76 0.00338818 208 0 9.47457e+07 0.0261776 364714 9.54287e+07 1.19361e+07 24920 4.71098e+07 0 0.162294 0.992843 0.805067 9.47457e+07 0.0037974 2.0646e+07 7.99637e+06 2.07706e+07 232 2.08619e+07 1.69834e+07 0.00359249 2.06862e+07 49.7886 0.00382185 0.994322 0 50.1505 GTEX-17GQL-5004-SM-AN453 B1 Heart Heart - Left Ventricle 0006566 458 ChIP-Seq GTEX-17GQL-5007-SM-AN454 B1 Lung Lung 0008952 476 ChIP-Seq GTEX-17GQL-5025-SM-AN455 B1 Muscle Muscle - Skeletal 0011907 506 ChIP-Seq GTEX-17HG3-0002-SM-6RBKU C1 Blood Whole Blood 0013756 991 BP-50939 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/28/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17HG3-0006-SM-7MKFE C1 8.5 Blood Whole Blood 0013756 991 BP-50944 RNA isolation_PAXgene Blood RNA (Manual) 03/28/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.960366 397105 0.981118 0.964826 0.792511 19679 1 76 0.00357909 119 0 9.81283e+07 0.0176959 210793 1.01706e+08 1.30113e+07 19691 4.86651e+07 0 0.188606 0.964826 0.764636 9.81283e+07 0.00563695 2.31286e+07 1.41828e+08 2.28863e+07 154 2.30891e+07 2.53209e+07 0.00460326 2.33953e+07 50.3293 0.00207258 0.969286 0 49.7366 GTEX-17HG3-0008-SM-EAZBD C1 8.6 Skin Cells - Cultured fibroblasts EFO_0002009 1193 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993769 667204 0.967646 0.994646 0.847253 20882 1 76 0.00166918 289 0 1.15111e+08 0.0320318 281653 1.15731e+08 7.46047e+06 20900 5.73915e+07 0 0.120393 0.994646 0.842717 1.15111e+08 0.00242199 2.55301e+07 2.97622e+07 2.58202e+07 283 2.58301e+07 3.07262e+07 0.00204525 2.5622e+07 49.7978 0.00243369 0.995523 0 50.2824 GTEX-17HG3-0011-R10b-SM-7LT97 C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 995 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990604 661889 0.95429 0.993358 0.832446 23672 1 76 0.00267072 199 0 7.50421e+07 0.0450518 1.95583e+06 7.55438e+07 8.25395e+06 23685 3.73123e+07 0 0.121844 0.993358 0.826917 7.50421e+07 0.00349467 1.62611e+07 1.66924e+07 1.63761e+07 230 1.64672e+07 1.10644e+07 0.00308155 1.63625e+07 49.8406 0.02589 0.996113 0 50.1762 GTEX-17HG3-0011-R11b-SM-7KFT4 C1, A1 8.7 Brain Brain - Cerebellar Hemisphere 0002037 995 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992218 672727 0.940031 0.993541 0.726741 23966 1 76 0.00306125 161 0 8.13956e+07 0.0595107 1.09600e+06 8.19248e+07 5.91867e+06 23993 4.04934e+07 0 0.213289 0.993541 0.722047 8.13956e+07 0.0030935 1.7313e+07 1.73853e+07 1.75838e+07 192 1.76024e+07 1.04362e+07 0.00307735 1.74065e+07 49.7203 0.0133782 0.994864 0 50.388 GTEX-17HG3-0011-R1a-SM-7LG6H C1, A1 7.1 Brain Brain - Hippocampus 0001954 995 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.974542 1.37622e+06 0.948147 0.983333 0.810877 24454 1 76 0.00370412 275 0 9.78588e+07 0.0515392 7.27552e+06 9.95174e+07 1.59216e+07 24477 4.82789e+07 0 0.13727 0.983333 0.797363 9.78588e+07 0.00575486 2.08325e+07 4.97336e+07 2.09396e+07 306 2.13434e+07 1.00845e+07 0.00472032 2.11726e+07 49.7991 0.073108 0.992125 0 50.1282 GTEX-17HG3-0011-R2a-SM-7MGVX C1, A1 5.6 Brain Brain - Substantia nigra 0002038 995 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990953 228237 0.968243 0.992888 0.867071 20935 1 76 0.00272984 272 0 6.94937e+07 0.0315973 8.08746e+06 6.99915e+07 5.10041e+06 20945 3.46294e+07 0 0.101172 0.992888 0.860904 6.94937e+07 0.00368005 1.53623e+07 1.48954e+07 1.58253e+07 265 1.55348e+07 5.26771e+06 0.00320402 1.5763e+07 50.3645 0.115549 0.994823 0 50.7423 GTEX-17HG3-0011-R4a-SM-7IGLL C1, A1 6.1 Brain Brain - Amygdala 0001876 995 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993939 2.10638e+06 0.933048 0.994843 0.842379 22980 1 76 0.0020676 377 0 1.16143e+08 0.0666625 8.00256e+06 1.16745e+08 7.63051e+06 22994 5.7893e+07 0 0.0906694 0.994843 0.838034 1.16143e+08 0.0026561 2.44091e+07 6.43117e+07 2.51701e+07 373 2.49265e+07 1.36136e+07 0.00236158 2.48042e+07 49.877 0.0685471 0.995747 0 50.7674 GTEX-17HG3-0011-R5a-SM-7DUEW C1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 995 BP-52531 RNA isolation_PAXgene Tissue miRNA 05/07/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992374 979559 0.951267 0.99299 0.865398 21796 1 76 0.00272754 373 0 8.76873e+07 0.0483381 5.57462e+06 8.83064e+07 8.2566e+06 21808 4.36674e+07 0 0.085869 0.99299 0.859331 8.76873e+07 0.00406999 1.88867e+07 3.41772e+07 1.94667e+07 332 1.94116e+07 1.09499e+07 0.00339835 1.90076e+07 49.4742 0.0631281 0.993606 0 50.7562 GTEX-17HG3-0011-R6b-SM-79OK8 C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 995 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977354 347850 0.962592 0.981071 0.850289 22435 1 76 0.00529759 123 0 6.05429e+07 0.037031 3.81251e+06 6.1711e+07 1.46252e+07 22448 3.01311e+07 0 0.112303 0.981071 0.834193 6.05429e+07 0.00635747 1.31859e+07 1.54852e+07 1.33329e+07 158 1.34109e+07 6.91395e+06 0.00582552 1.33102e+07 49.8115 0.0617801 0.984788 0 50.2772 GTEX-17HG3-0011-R7b-SM-7EPGR C1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 995 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991154 733635 0.956911 0.993552 0.830582 23164 1 76 0.00314762 268 0 1.07222e+08 0.0428393 8.68592e+06 1.07918e+08 1.45019e+07 23179 5.34314e+07 0 0.126329 0.993552 0.825226 1.07222e+08 0.0114571 2.29093e+07 5.059e+07 2.3614e+07 265 2.35308e+07 9.52701e+06 0.00729232 2.32075e+07 49.6541 0.080486 0.99595 0 50.7574 GTEX-17HG3-0011-R8a-SM-79OK7 C1, A1 7 Brain Brain - Hypothalamus 0001898 995 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.979484 329119 0.961183 0.983105 0.843542 22759 1 76 0.00529013 125 0 5.9362e+07 0.0385307 3.51629e+06 6.03822e+07 1.42072e+07 22773 2.95478e+07 0 0.11764 0.983105 0.829291 5.9362e+07 0.00637059 1.29194e+07 1.50779e+07 1.31584e+07 156 1.32058e+07 6.07336e+06 0.00582837 1.30615e+07 49.7254 0.0582339 0.986726 0 50.4583 GTEX-17HG3-0126-SM-7IGNH 2 C1 2 pieces; fat and abundant dense fibrocollagenous stroma with multiple ducts and lobules with sloughing lining. Focal proliferation and microcalcification 6.1 Breast Breast - Mammary Tissue 0008367 1007 1325 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993578 237372 0.971231 0.994412 0.752947 24907 1 76 0.00224776 142 0 7.52214e+07 0.0284087 177055 7.56441e+07 4.89933e+06 24935 3.74789e+07 0 0.218283 0.994412 0.74874 7.52214e+07 0.00292444 1.65585e+07 7.62044e+06 1.66718e+07 163 1.66621e+07 1.25695e+07 0.00258582 1.66325e+07 49.9556 0.00234063 0.995245 0 50.1705 GTEX-17HG3-0226-SM-7EWEA 3 C1 2 pieces; variably sized follicles, focal collections of lymphocytes 6.5 Thyroid Thyroid 0002046 1009 1323 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991548 157386 0.965025 0.993272 0.762989 23794 1 76 0.00265903 126 0 6.03976e+07 0.0343191 653675 6.08067e+07 5.0503e+06 23823 3.00571e+07 0 0.202037 0.993272 0.757855 6.03976e+07 0.00368925 1.32103e+07 8.86823e+06 1.33293e+07 139 1.33517e+07 8.9159e+06 0.00317324 1.32877e+07 49.88 0.0107501 0.994995 0 50.2241 GTEX-17HG3-0326-SM-7IGP4 2 C1 2 pieces; congestion, intra-alveolar hemorrhage/edema 5.8 Lung Lung 0008952 1010 1322 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99207 139077 0.965778 0.992361 0.778089 22629 1 76 0.00226973 147 0 6.65893e+07 0.033968 1.76908e+06 6.71018e+07 2.80617e+06 22650 3.31846e+07 0 0.187688 0.992361 0.772146 6.65893e+07 0.00260246 1.45906e+07 1.01812e+07 1.4902e+07 177 1.48698e+07 7.59125e+06 0.00243605 1.46418e+07 49.6137 0.0263641 0.992652 0 50.5278 GTEX-17HG3-1126-SM-7DUFC 2 C1 6 pieces; predominantly muscularis, few pieces include residual autolyzed mucosa (marked) 7.3 Colon Colon - Sigmoid 0001159 1026 1311 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.987158 308621 0.966483 0.987266 0.82826 24437 1 76 0.00299286 271 0 8.88423e+07 0.0332842 3.97909e+06 8.99882e+07 8.99883e+06 24465 4.41722e+07 0 0.138223 0.987266 0.817713 8.88423e+07 0.00451258 1.9472e+07 1.57342e+07 1.97894e+07 305 1.98247e+07 1.06792e+07 0.00375264 1.94507e+07 49.5239 0.0442179 0.987374 0 50.4042 GTEX-17HG3-1526-SM-7MGWA 2 C1 2 pieces; one piece is ~50% fibrous 5.7 Heart Heart - Atrial Appendage 0006631 1034 1305 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6755 04/12/2015 TruSeq.v1 EXCLUDE 0.991182 94095 0.984071 0.993382 0.887401 19264 1 76 0.0028792 261 0 6.8688e+07 0.015858 6.69394e+06 6.91456e+07 5.50758e+06 19268 3.42235e+07 0 0.0966702 0.993382 0.881528 6.8688e+07 0.00371864 1.5409e+07 1.12589e+07 1.57829e+07 296 1.56619e+07 3.18494e+06 0.00329799 1.56376e+07 49.9611 0.0968094 0.995581 0 50.5994 GTEX-17HG3-2226-SM-7938L 1 C1 6 pieces; ~5-10% internal fat, epidermis measures 57 microns, focal parakeratosis 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1192 1151 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994025 283838 0.971112 0.994719 0.774061 22451 1 76 0.00203982 184 0 5.21831e+07 0.0286521 221657 5.24602e+07 2.33701e+06 22477 2.5985e+07 0 0.19705 0.994719 0.769973 5.21831e+07 0.00257115 1.13348e+07 5.65923e+06 1.13354e+07 126 1.14086e+07 9.2514e+06 0.0023053 1.12971e+07 49.7546 0.00422524 0.995414 0 50.0014 GTEX-17HG3-2326-SM-79OKH 1 C1 2 pieces; one includes small amount of fibrous tissue and portion of large vessel 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 1194 1150 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.975922 243606 0.966982 0.97973 0.721093 23864 1 76 0.00510317 127 0 6.68583e+07 0.0327621 344756 6.82416e+07 1.56437e+07 23901 3.32338e+07 0 0.245889 0.97973 0.706476 6.68583e+07 0.00625042 1.46308e+07 7.47055e+06 1.47028e+07 138 1.47924e+07 9.12976e+06 0.00567457 1.47792e+07 49.9777 0.00505199 0.983538 0 50.1228 GTEX-17HG3-2526-SM-7IGOD 1 C1 2 pieces; includes ~10 and 30% internal/external fat 5.9 Nerve Nerve - Tibial 0001323 1204 1141 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99399 205847 0.961551 0.993996 0.696061 24822 1 76 0.00210045 135 0 6.92785e+07 0.0382119 336944 6.96969e+07 3.11325e+06 24866 3.45143e+07 0 0.26549 0.993996 0.691882 6.92785e+07 0.00248064 1.51271e+07 6.3615e+06 1.52627e+07 151 1.52598e+07 9.02048e+06 0.00229055 1.51338e+07 49.7927 0.00483442 0.994003 0 50.2231 GTEX-17HG3-2626-SM-7DUF2 1 C1 6 pieces; one piece with ~20% attached and internal fat, some parakeratosis 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1209 1137 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990201 537812 0.971112 0.990517 0.747381 25683 1 76 0.00300316 171 0 9.18149e+07 0.0285958 417528 9.2694e+07 9.15517e+06 25736 4.56328e+07 0 0.22373 0.990517 0.740294 9.18149e+07 0.00431134 2.03466e+07 1.09233e+07 2.02924e+07 191 2.05233e+07 1.59748e+07 0.00365705 2.01509e+07 49.5423 0.00450437 0.990832 0 49.9333 GTEX-17HG3-2726-SM-7DHL5 1 C1 2 pieces; includes minimal internal fat/nerve 8.2 Muscle Muscle - Skeletal 0011907 1211 1135 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99192 150582 0.983158 0.993268 0.877495 19972 1 76 0.00334896 153 0 8.0773e+07 0.0165602 738939 8.13204e+07 6.13043e+06 19980 4.02359e+07 0 0.105663 0.993268 0.871588 8.0773e+07 0.00511563 1.74094e+07 6.7122e+06 1.76769e+07 176 1.77139e+07 1.75567e+07 0.0042311 1.74688e+07 49.6517 0.00908676 0.994616 0 50.3812 GTEX-17HG3-2826-SM-7EPGO 2 C1 4 pieces; purkinje cells well visualized, few with ? evidence of hypoxic damage 6.8 Brain Brain - Cerebellum 0002037 1272 1076 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.98995 822051 0.929182 0.992248 0.706136 24713 1 76 0.0033345 127 0 9.64038e+07 0.0704752 1.73057e+06 9.7157e+07 1.22836e+07 24753 4.79978e+07 0 0.223046 0.992248 0.700662 9.64038e+07 0.011769 2.03492e+07 3.75391e+07 2.06974e+07 160 2.0751e+07 1.08759e+07 0.007542 2.0503e+07 49.6994 0.0178121 0.994545 0 50.4241 GTEX-17HG3-2926-SM-79ON8 1 C1 4 pieces 6.7 Brain Brain - Cortex 0001870 1275 1073 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993813 136679 0.968093 0.993896 0.832365 23116 1 76 0.00314834 125 0 6.10363e+07 0.0315114 2.54356e+06 6.14111e+07 3.68933e+06 23132 3.04006e+07 0 0.135728 0.993896 0.827284 6.10363e+07 0.00438773 1.3501e+07 6.3903e+06 1.36815e+07 165 1.36589e+07 7.12784e+06 0.00376798 1.35207e+07 49.7458 0.0414185 0.99398 0 50.3321 GTEX-17HG3-3026-SM-79ONC 2 C1 1 piece; adenohypophysis and neurohypophysis, portion of dura 6.7 Pituitary Pituitary 0000007 1275 1074 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992898 325218 0.957393 0.993291 0.732713 25499 1 76 0.00328164 150 0 7.59734e+07 0.0423673 380354 7.64865e+07 4.41133e+06 25543 3.7842e+07 0 0.224681 0.993291 0.727797 7.59734e+07 0.00461144 1.61888e+07 1.09847e+07 1.6334e+07 165 1.63717e+07 1.05481e+07 0.00394627 1.61798e+07 49.7053 0.00497282 0.993684 0 50.2233 GTEX-17HGU-0001-SM-6RBK5 C1 Blood Whole Blood 0013756 219 BP-50990 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/31/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17HGU-0001-SM-6UH1W C1 Blood Whole Blood 0013756 219 BP-50990 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/31/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17HGU-0006-SM-7MXT8 C1 7.4 Blood Whole Blood 0013756 219 BP-51006 RNA isolation_PAXgene Blood RNA (Manual) 03/31/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.942732 397320 0.978689 0.952139 0.823353 18071 1 76 0.00321935 100 0 8.49751e+07 0.0198858 198898 8.92465e+07 1.4987e+07 18074 4.19557e+07 0 0.155336 0.952139 0.783946 8.49751e+07 0.00491565 1.97118e+07 1.43277e+08 1.98141e+07 134 2.01196e+07 2.31391e+07 0.00405912 2.02387e+07 50.1475 0.00222864 0.961547 0 50.1295 GTEX-17HGU-0008-SM-EAZBH C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 364 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992246 224629 0.971675 0.993284 0.83577 19544 1 76 0.00170745 141 0 5.76299e+07 0.0279705 213908 5.80196e+07 4.46623e+06 19557 2.87278e+07 0 0.135905 0.993284 0.830158 5.76299e+07 0.00273233 1.27147e+07 1.04474e+07 1.2837e+07 124 1.28198e+07 1.44191e+07 0.00221936 1.2793e+07 49.9477 0.00368682 0.994323 0 50.2393 GTEX-17HGU-0126-SM-7DHLV 1 C1 2 pieces; well trimmed 8.1 Adrenal Gland Adrenal Gland 0002369 233 1346 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99136 118137 0.972573 0.992174 0.782752 22785 1 76 0.00335804 131 0 7.00142e+07 0.0271771 1.39967e+06 7.05665e+07 5.52638e+06 22813 3.48395e+07 0 0.189821 0.992174 0.776626 7.00142e+07 0.00506634 1.53659e+07 7.84448e+06 1.55859e+07 162 1.56161e+07 9.88496e+06 0.00421149 1.53828e+07 49.6236 0.0198347 0.992988 0 50.3554 GTEX-17HGU-0226-SM-7DHKV 0 C1 6 pieces; well trimmed; 5-10% dermall fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 363 1217 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991071 85809 0.972491 0.992428 0.792531 23807 1 76 0.00357222 177 0 7.37316e+07 0.0272417 238397 7.42942e+07 5.72148e+06 23831 3.67113e+07 0 0.17996 0.992428 0.78653 7.37316e+07 0.00531553 1.60887e+07 7.11724e+06 1.62095e+07 161 1.62389e+07 1.30616e+07 0.00444268 1.61512e+07 49.8647 0.00320882 0.993785 0 50.187 GTEX-17HGU-0326-SM-7DUER 0 C1 2 pieces; 5 & 10% fibrous content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 366 1214 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993069 233884 0.970541 0.993785 0.770627 24351 1 76 0.00276466 280 0 9.87059e+07 0.0291757 486076 9.93232e+07 8.81782e+06 24392 4.91748e+07 0 0.199914 0.993785 0.765838 9.87059e+07 0.00398615 2.16827e+07 9.86459e+06 2.18552e+07 276 2.19083e+07 1.59643e+07 0.00337497 2.16987e+07 49.7597 0.00489388 0.9945 0 50.1981 GTEX-17HGU-0426-SM-7DUES 0 C1 2 pieces; thin external coating of fat up to 0.7 mm; <5% internal fat 7.4 Nerve Nerve - Tibial 0001323 392 1189 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992636 238220 0.966502 0.993309 0.748448 24757 1 76 0.00278855 232 0 9.4673e+07 0.033134 268500 9.53107e+07 8.38705e+06 24798 4.71326e+07 0 0.218054 0.993309 0.74344 9.4673e+07 0.00414179 2.08455e+07 8.95052e+06 2.08753e+07 224 2.09367e+07 1.51031e+07 0.00346471 2.08512e+07 49.8978 0.0028171 0.993982 0 50.0357 GTEX-17HGU-0526-SM-793BX 0 C1 2 pieces; well trimmed, no external fat; no lesions 7.6 Blood Vessel Artery - Tibial 0007610 393 1188 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993818 289353 0.975938 0.994993 0.842447 20542 1 76 0.00279448 132 0 6.15344e+07 0.0236832 177261 6.18441e+07 8.39546e+06 20554 3.06566e+07 0 0.133491 0.994993 0.838228 6.15344e+07 0.00339811 1.31872e+07 4.73362e+06 1.3245e+07 138 1.3263e+07 1.28344e+07 0.00309594 1.3241e+07 49.9585 0.00286626 0.996167 0 50.1094 GTEX-17HGU-0626-SM-7939Y 1 C1 2 pieces; <5% internal fat; well trimmed 8.6 Muscle Muscle - Skeletal 0011907 395 1187 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993147 381415 0.981698 0.994143 0.883369 18893 1 76 0.00191948 124 0 5.85664e+07 0.0180322 609045 5.89115e+07 4.63018e+06 18900 2.91338e+07 0 0.0983292 0.994143 0.878195 5.85664e+07 0.00257431 1.24777e+07 5.22292e+06 1.24836e+07 138 1.2578e+07 1.29457e+07 0.00224657 1.24386e+07 49.7215 0.0103383 0.995141 0 50.0118 GTEX-17HGU-0726-SM-7DUFN 1 C1 2 pieces; foci of fibrosis up to 3 sq mm [circled] 7.5 Testis Testis 0000473 411 1172 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991615 346104 0.934062 0.992357 0.714894 32914 1 76 0.00285751 169 0 8.34837e+07 0.065638 729138 8.41267e+07 7.57704e+06 32979 4.15861e+07 0 0.219168 0.992357 0.70943 8.34837e+07 0.00397289 1.7564e+07 1.14267e+07 1.76608e+07 172 1.77306e+07 1.31971e+07 0.00341478 1.75453e+07 49.7374 0.00866714 0.9931 0 50.1374 GTEX-17HGU-0826-SM-7EWE5 1 C1 2 pieces; foci of fibrosis up to 2.6 sq mm [circled] 6.5 Thyroid Thyroid 0002046 415 1168 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990977 147442 0.962686 0.992819 0.747452 23517 1 76 0.00237282 126 0 6.17111e+07 0.0370424 371953 6.21575e+07 5.51897e+06 23549 3.07007e+07 0 0.215234 0.992819 0.742084 6.17111e+07 0.00357499 1.34507e+07 6.43836e+06 1.35068e+07 143 1.3517e+07 8.77429e+06 0.00297279 1.35464e+07 50.0544 0.00598404 0.99466 0 50.1041 GTEX-17HGU-0926-SM-79OKO 1 C1 2 pieces; patchy emphysema & fibrosis; aspiration 7 Lung Lung 0008952 419 1164 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.975231 219134 0.97352 0.979169 0.757816 23666 1 76 0.00515645 122 0 6.50886e+07 0.0259506 173094 6.64733e+07 1.47753e+07 23690 3.23427e+07 0 0.215704 0.979169 0.74203 6.50886e+07 0.00638363 1.43871e+07 7.3249e+06 1.44606e+07 132 1.45473e+07 1.05683e+07 0.00576757 1.45464e+07 49.9984 0.00260396 0.983107 0 50.1274 GTEX-17HGU-1026-SM-79OKL 1 C1 2 pieces; scattered areas of fibrosis <5%; enlarged nuclei 7 Heart Heart - Left Ventricle 0006566 421 1164 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977241 243212 0.979489 0.981404 0.835269 20931 1 76 0.00505382 107 0 5.78788e+07 0.0202989 1.6273e+06 5.89755e+07 1.426e+07 20940 2.87909e+07 0 0.14422 0.981404 0.819736 5.78788e+07 0.00643672 1.27077e+07 7.38519e+06 1.28929e+07 135 1.3031e+07 9.00664e+06 0.00574234 1.27868e+07 49.5272 0.0275928 0.985566 0 50.3617 GTEX-17HGU-1126-SM-793BP 1 C1 2 pieces; smaller piece is all fibrofatty tissue; larger piece has 5% fibrofatty content 7.6 Heart Heart - Atrial Appendage 0006631 423 1162 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.9942 336019 0.978737 0.995329 0.814127 23476 1 76 0.00278714 202 0 8.45635e+07 0.020963 1.33926e+06 8.49604e+07 1.10473e+07 23501 4.21382e+07 0 0.164611 0.995329 0.810324 8.45635e+07 0.00325311 1.83969e+07 9.37238e+06 1.84507e+07 218 1.84886e+07 1.40707e+07 0.00301986 1.8448e+07 49.9452 0.0157633 0.996458 0 50.0731 GTEX-17HGU-1326-SM-79OKB 0 C1 2 pieces; fatty tissue without mammary ducts 7 Breast Breast - Mammary Tissue 0008367 427 1160 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.974717 242113 0.973953 0.978936 0.79178 22549 1 76 0.00520781 128 0 6.25774e+07 0.0257869 693204 6.39239e+07 1.5365e+07 22565 3.11121e+07 0 0.182173 0.978936 0.775101 6.25774e+07 0.00667946 1.37326e+07 7.70163e+06 1.38737e+07 142 1.39611e+07 9.36591e+06 0.00594047 1.38925e+07 49.8768 0.0108442 0.983155 0 50.2556 GTEX-17HGU-1426-SM-7938G 0 C1 6 pieces; in 2 pieces prominent submucosal glands and inflamed dilated squamous metaplastic ducts; well dissected 8.5 Esophagus Esophagus - Mucosa 0006920 429 1158 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.994691 212605 0.971796 0.995575 0.779145 22759 1 76 0.00216396 126 0 6.21031e+07 0.0279149 262893 6.23791e+07 4.10474e+06 22779 3.09517e+07 0 0.192651 0.995575 0.775697 6.21031e+07 0.00259515 1.39174e+07 6.50685e+06 1.39144e+07 135 1.39657e+07 1.17533e+07 0.00237936 1.39194e+07 49.9171 0.00421444 0.996458 0 49.9944 GTEX-17HGU-1526-SM-7EWE4 1 C1 6 pieces; well dissected; lymphoid aggregates around ganglion cells 6.5 Esophagus Esophagus - Muscularis 0004648 430 1158 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990288 176931 0.967313 0.992432 0.768243 22300 1 76 0.00242507 121 0 5.78252e+07 0.0325106 1.87088e+06 5.82661e+07 5.20369e+06 22326 2.87623e+07 0 0.199071 0.992432 0.762429 5.78252e+07 0.00373031 1.25482e+07 5.84582e+06 1.26656e+07 141 1.26796e+07 7.77216e+06 0.00307628 1.26478e+07 49.9372 0.0321093 0.994576 0 50.2329 GTEX-17HGU-1626-SM-9OSVG 1 C1 6 pieces; well dissected 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 431 1157 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99177 227409 0.969374 0.994019 0.786851 24124 1 76 0.00261191 272 0 1.02437e+08 0.0304136 1.44164e+06 1.03053e+08 1.03028e+07 24159 5.0986e+07 0 0.182524 0.994019 0.782144 1.02437e+08 0.00348354 2.20542e+07 9.71728e+06 2.2401e+07 300 2.24263e+07 1.47942e+07 0.00304674 2.22427e+07 49.7945 0.0139893 0.996268 0 50.3901 GTEX-17HGU-1726-SM-79OKM 0 C1 2 pieces; minimal fibrous content 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 432 1157 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.978274 203612 0.977352 0.982222 0.822287 21579 1 76 0.00496155 117 0 5.46429e+07 0.0223718 376799 5.56319e+07 1.27292e+07 21588 2.71862e+07 0 0.155065 0.982222 0.807669 5.46429e+07 0.00639009 1.20104e+07 5.42336e+06 1.21101e+07 127 1.21829e+07 9.09045e+06 0.00567295 1.214e+07 49.9118 0.00677308 0.98617 0 50.2065 GTEX-17HGU-1826-SM-7IGQM 1 C1 2 pieces; mild congestion; <5% macrovesicular steatosis 5.9 Liver Liver 0001114 434 1155 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994921 281325 0.972121 0.995414 0.819583 21039 1 76 0.00191773 196 0 7.71661e+07 0.0277529 2.06892e+06 7.75217e+07 2.57561e+06 21059 3.84682e+07 0 0.152538 0.995414 0.815824 7.71661e+07 0.00229597 1.67719e+07 1.35722e+07 1.71647e+07 252 1.70892e+07 9.03826e+06 0.00210676 1.68831e+07 49.6967 0.0266883 0.995906 0 50.5787 GTEX-17HGU-2026-SM-79OKS 1 C1 2 pieces; 40 & 20% internal fat 7 Pancreas Pancreas 0001150 438 1153 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.97429 199044 0.974347 0.978439 0.800927 21445 1 76 0.00525361 97 0 5.81187e+07 0.0254881 266624 5.93994e+07 1.40313e+07 21461 2.89062e+07 0 0.17342 0.978439 0.783658 5.81187e+07 0.00678831 1.31802e+07 1.32351e+07 1.33389e+07 109 1.34051e+07 1.47205e+07 0.00601771 1.33527e+07 49.902 0.00448866 0.982588 0 50.2991 GTEX-17HGU-2126-SM-7IGOV 2 C1 6 pieces; portions of mucosa have severe autolysis 5.8 Stomach Stomach 0000945 439 1152 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994597 167322 0.981612 0.995107 0.848248 21179 1 76 0.00167427 237 0 6.85156e+07 0.0182563 3.71071e+06 6.88525e+07 2.26306e+06 21189 3.41634e+07 0 0.133364 0.995107 0.844097 6.85156e+07 0.00206715 1.5325e+07 3.12466e+07 1.57066e+07 231 1.57665e+07 9.12796e+06 0.00187061 1.53025e+07 49.2533 0.0538936 0.995616 0 50.615 GTEX-17HGU-2226-SM-7IGLI 2 C1 2 pieces; stroma in better shape than glands 6.2 Prostate Prostate 0002367 442 1150 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445,LCSET-7012 04/12/2015 TruSeq.v1 RNASEQ 0.990534 343786 0.96328 0.992575 0.741297 25991 1 76 0.00208176 277 0 1.03129e+08 0.0365176 947334 1.03901e+08 6.10145e+06 26036 5.13081e+07 0 0.221983 0.992575 0.735793 1.03129e+08 0.00312151 2.2645e+07 1.12569e+07 2.28138e+07 318 2.28283e+07 1.40418e+07 0.00260057 2.28398e+07 50.0126 0.00911768 0.994616 0 50.1857 GTEX-17HGU-2326-SM-7DUFE 0 C1 6 pieces; 3 have up to 7 hair follicles and 10% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 446 1146 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442,LCSET-6865 02/18/2015 TruSeq.v1 RNASEQ 0.9892 414841 0.969582 0.991618 0.783633 24883 1 76 0.00231813 289 0 9.69106e+07 0.0301014 532189 9.77298e+07 7.06247e+06 24918 4.8223e+07 0 0.185949 0.991618 0.777065 9.69106e+07 0.00314708 2.1305e+07 1.15687e+07 2.13121e+07 279 2.14249e+07 1.62365e+07 0.00273159 2.14167e+07 49.9904 0.00544552 0.994037 0 50.0084 GTEX-17HGU-2426-SM-7EWDP 2 C1 6 pieces; muscle in better shape than mucosa 6.5 Colon Colon - Transverse 0001157 447 1146 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991908 143058 0.973472 0.993861 0.814245 22513 1 76 0.00225858 133 0 6.18747e+07 0.0259624 1.21392e+06 6.22569e+07 5.55936e+06 22533 3.08047e+07 0 0.159227 0.993861 0.809247 6.18747e+07 0.00337782 1.37219e+07 8.68344e+06 1.3852e+07 163 1.38511e+07 8.35909e+06 0.0028171 1.38275e+07 49.9572 0.0194985 0.995814 0 50.2359 GTEX-17HGU-2626-SM-79OKN 1 C1 6 pieces; well dissected 7 Colon Colon - Sigmoid 0001159 452 1142 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976469 201061 0.972365 0.980487 0.790957 22278 1 76 0.00515253 136 0 6.00713e+07 0.0273827 585065 6.12668e+07 1.48378e+07 22299 2.98807e+07 0 0.181408 0.980487 0.775523 6.00713e+07 0.0064637 1.29726e+07 5.96508e+06 1.30886e+07 131 1.31555e+07 9.40525e+06 0.00580543 1.31259e+07 49.9437 0.00954946 0.984506 0 50.2225 GTEX-17HHE-0002-SM-6RBJV B1 Blood Whole Blood 0013756 3 BP-50990 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/31/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17HHE-0002-SM-6UH1N B1 Blood Whole Blood 0013756 3 BP-50990 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/31/2014 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17HHE-0005-SM-7P8OT B1 8.7 Blood Whole Blood 0013756 3 BP-51006 RNA isolation_PAXgene Blood RNA (Manual) 03/31/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.980278 343286 0.979715 0.982228 0.830042 20577 1 76 0.00299874 195 0 1.1023e+08 0.0191478 359442 1.12224e+08 1.46098e+07 20589 5.48452e+07 0 0.149674 0.982228 0.81529 1.1023e+08 0.00455727 2.56312e+07 1.11704e+08 2.57432e+07 254 2.58095e+07 2.74447e+07 0.00377645 2.57811e+07 49.9724 0.00320288 0.984177 0 50.109 GTEX-17HHE-0008-SM-EAZBJ B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 389 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993829 526438 0.979953 0.994662 0.865162 21016 1 76 0.00165566 298 0 1.19042e+08 0.0197075 232520 1.19681e+08 9.0277e+06 21036 5.9353e+07 0 0.114792 0.994662 0.860544 1.19042e+08 0.00245439 2.6782e+07 1.47413e+07 2.68942e+07 313 2.69198e+07 3.17439e+07 0.00205469 2.6854e+07 49.9388 0.00194283 0.995495 0 50.1045 GTEX-17HHE-0126-SM-79398 1 B1 2 pieces, mild microvesicular steatosis 8.4 Liver Liver 0001114 111 1272 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993876 405146 0.975556 0.994755 0.822231 20317 1 76 0.00205553 111 0 5.99577e+07 0.0241863 232722 6.02738e+07 4.65191e+06 20338 2.98318e+07 0 0.153325 0.994755 0.817919 5.99577e+07 0.00257857 1.30828e+07 5.91472e+06 1.30188e+07 124 1.31262e+07 1.36539e+07 0.00231682 1.30236e+07 49.804 0.00386108 0.995635 0 49.8774 GTEX-17HHE-0226-SM-79399 1 B1 2 pieces, mainly cortex, ~5x1.5mm well preserved focus of medulla (ensquared/delineated), valuable specimen. Nubbin of adherent fat, ~1.5mm 8.8 Adrenal Gland Adrenal Gland 0002369 115 1268 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.990802 463315 0.975103 0.991256 0.811648 21086 1 76 0.00224481 116 0 5.42582e+07 0.0246369 919726 5.47369e+07 6.24939e+06 21104 2.69022e+07 0 0.163456 0.991256 0.80455 5.42582e+07 0.00279433 1.2088e+07 5.76712e+06 1.19725e+07 141 1.21835e+07 8.16894e+06 0.00251944 1.18933e+07 49.3972 0.0168027 0.99171 0 49.76 GTEX-17HHE-0326-SM-793BH 1 B1 2 pieces, no abnormalities 7.6 Spleen Spleen 0002106 116 1267 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.991948 476551 0.96131 0.993026 0.746622 25376 1 76 0.00367875 203 0 9.67754e+07 0.0366098 409088 9.7455e+07 1.3697e+07 25415 4.81192e+07 0 0.214688 0.993026 0.741415 9.67754e+07 0.004039 2.13583e+07 1.66781e+07 2.14016e+07 239 2.1517e+07 1.49684e+07 0.00385868 2.13398e+07 49.7932 0.00419771 0.994105 0 50.0506 GTEX-17HHE-0426-SM-79OK3 1 B1 2 pieces, ~5x1mm nubbin of adherent fat/vascular tissue, delineated 7.1 Thyroid Thyroid 0002046 118 1265 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.979141 206013 0.960678 0.982989 0.732334 23637 1 76 0.00489655 110 0 5.54666e+07 0.0390537 209971 5.64264e+07 1.24388e+07 23666 2.75939e+07 0 0.228344 0.982989 0.719877 5.54666e+07 0.00620533 1.20375e+07 6.9229e+06 1.20759e+07 115 1.21479e+07 8.13889e+06 0.00554838 1.21636e+07 50.0323 0.00372115 0.986838 0 50.0795 GTEX-17HHE-0526-SM-7DUGR 1 B1 2 pieces, well preserved Islets present, rep. encircled 7.5 Pancreas Pancreas 0001150 119 1264 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.99396 248468 0.979473 0.994817 0.844995 22836 1 76 0.0029078 107 0 9.15577e+07 0.0201708 148184 9.20347e+07 8.00327e+06 22866 4.56302e+07 0 0.134478 0.994817 0.840616 9.15577e+07 0.00414088 2.11444e+07 2.53306e+07 2.14179e+07 136 2.14089e+07 2.86492e+07 0.00352381 2.12306e+07 49.791 0.00161009 0.995675 0 50.3212 GTEX-17HHE-0626-SM-7DHL6 1 B1 2 pieces, moderate congestion/alveolar edema 8.3 Lung Lung 0008952 126 1257 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990171 127936 0.971458 0.991403 0.75102 25051 1 76 0.00370423 168 0 8.71307e+07 0.0281439 184640 8.78862e+07 6.97288e+06 25098 4.33462e+07 0 0.220438 0.991403 0.744563 8.71307e+07 0.00550063 1.9351e+07 6.81839e+06 1.94394e+07 184 1.94902e+07 1.39775e+07 0.00460131 1.94022e+07 49.8868 0.0021009 0.992635 0 50.1139 GTEX-17HHE-0726-SM-7DHL7 1 B1 6 pieces, confirmed target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 131 1252 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99205 104085 0.973978 0.993281 0.828251 22180 1 76 0.00340422 164 0 7.83386e+07 0.0257494 428182 7.88685e+07 5.9411e+06 22199 3.90135e+07 0 0.145727 0.993281 0.822686 7.83386e+07 0.00508843 1.6678e+07 6.17379e+06 1.68923e+07 188 1.68754e+07 1.35699e+07 0.00424528 1.67788e+07 49.8565 0.00542906 0.994512 0 50.3192 GTEX-17HHE-0826-SM-793A2 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 135 1248 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994377 377742 0.974496 0.994549 0.817336 20796 1 76 0.00184519 124 0 5.24358e+07 0.0251385 217149 5.27232e+07 2.84859e+06 20807 2.60799e+07 0 0.15716 0.994549 0.81288 5.24358e+07 0.00229882 1.13242e+07 3.42084e+06 1.12993e+07 129 1.13771e+07 9.50507e+06 0.00207197 1.12575e+07 49.7359 0.00411866 0.994721 0 49.9449 GTEX-17HHE-0926-SM-7938K 1 B1 6 pieces, squamous mucosa up to ~0.8mm, 20-30% thickness. Few submucosal mucus glands, encircled 9.5 Esophagus Esophagus - Mucosa 0006920 137 1246 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994785 316447 0.977411 0.995447 0.831426 21119 1 76 0.00188576 132 0 5.87863e+07 0.0222998 211490 5.90552e+07 2.43518e+06 21131 2.93e+07 0 0.145985 0.995447 0.827641 5.87863e+07 0.00231715 1.31993e+07 7.11978e+06 1.32057e+07 135 1.32768e+07 1.24622e+07 0.00210131 1.3164e+07 49.7867 0.00358123 0.996109 0 50.012 GTEX-17HHE-1026-SM-79ON6 1 B1 6 pieces, well fixed mucosa up to ~0.8mm, ~50-80% of thickness. Incidental microcystic metaplasia in deeper glands. 6.6 Stomach Stomach 0000945 143 1240 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.983665 124640 0.982215 0.984223 0.849042 21989 1 76 0.00299989 312 0 6.84237e+07 0.0173583 527354 6.95205e+07 3.76702e+06 22001 3.40912e+07 0 0.133173 0.984223 0.835647 6.84237e+07 0.00424981 1.58646e+07 8.0336e+07 1.60705e+07 219 1.61138e+07 1.78854e+07 0.0036245 1.5858e+07 49.5999 0.00758559 0.984781 0 50.3224 GTEX-17HHE-1126-SM-793BS 1 B1 2 pieces, mild hyperplastic glandular pattern 7.9 Prostate Prostate 0002367 149 1234 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994963 259227 0.972849 0.996034 0.822186 22400 1 76 0.00276886 136 0 6.76097e+07 0.0268016 281046 6.78789e+07 9.55184e+06 22417 3.37002e+07 0 0.150663 0.996034 0.818925 6.76097e+07 0.00318038 1.44922e+07 5.04934e+06 1.45603e+07 148 1.45741e+07 1.29338e+07 0.0029744 1.45462e+07 49.9521 0.0041404 0.997104 0 50.1173 GTEX-17HHE-1226-SM-793C6 1 B1 2 pieces, spermatogenesis is present 7.9 Testis Testis 0000473 151 1232 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992749 448992 0.928239 0.9938 0.722406 34042 1 76 0.0029519 217 0 9.60158e+07 0.0714485 784392 9.66148e+07 1.42593e+07 34112 4.78525e+07 0 0.205833 0.9938 0.717927 9.60158e+07 0.00325505 2.00779e+07 1.3738e+07 2.01047e+07 224 2.01898e+07 1.58739e+07 0.00310331 2.0081e+07 49.8648 0.00811875 0.99485 0 50.0334 GTEX-17HHE-1326-SM-7EWDZ 1 B1 6 pieces, no adherent fat, squamous epithelium is ~40-50 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 155 1228 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991875 115056 0.975808 0.993879 0.820831 21440 1 76 0.00217614 151 0 5.72599e+07 0.0240071 492238 5.76125e+07 5.09846e+06 21461 2.85166e+07 0 0.154977 0.993879 0.815807 5.72599e+07 0.00348208 1.25502e+07 6.73582e+06 1.26685e+07 145 1.26644e+07 9.34383e+06 0.00282779 1.2663e+07 49.9972 0.00854394 0.995883 0 50.2345 GTEX-17HHE-1426-SM-7EPH4 1 B1 2 pieces, gynecomastoid stromal and focal ductal hyperplasia; rep ductal elements ensquared 6.9 Breast Breast - Mammary Tissue 0008367 156 1227 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991051 250881 0.96361 0.993321 0.746543 26251 1 76 0.00304514 139 0 9.98722e+07 0.0360938 420482 1.00544e+08 1.34569e+07 26303 4.97578e+07 0 0.217068 0.993321 0.741556 9.98722e+07 0.0113318 2.17689e+07 1.31417e+07 2.19892e+07 162 2.20303e+07 1.56529e+07 0.00717902 2.19354e+07 49.892 0.00418208 0.995591 0 50.2517 GTEX-17HHE-1526-SM-793AS 1 B1 2 pieces, minimal fascia 10 Adipose Tissue Adipose - Visceral (Omentum) 0010414 158 1225 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.994627 172225 0.973549 0.995512 0.814817 22525 1 76 0.00210887 139 0 6.47774e+07 0.0261488 457352 6.50694e+07 5.55665e+06 22547 3.22729e+07 0 0.158733 0.995512 0.811159 6.47774e+07 0.00250702 1.43061e+07 5.77315e+06 1.42924e+07 157 1.43299e+07 1.07673e+07 0.00230777 1.43227e+07 49.9875 0.00702868 0.996397 0 49.9761 GTEX-17HHE-1626-SM-7DHLN 1 B1 6 pieces, confirmed target muscularis. Minute (<0.5mm) focus 'contaminant' mucosa, encircled 8 Colon Colon - Sigmoid 0001159 165 1218 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990836 155348 0.97384 0.992216 0.818031 22651 1 76 0.00346114 161 0 7.52217e+07 0.0258681 341137 7.58118e+07 6.03114e+06 22669 3.74447e+07 0 0.155808 0.992216 0.811664 7.52217e+07 0.00527399 1.6226e+07 6.03232e+06 1.64478e+07 166 1.64484e+07 1.35972e+07 0.0043663 1.63185e+07 49.8018 0.00449979 0.993596 0 50.3395 GTEX-17HHE-1726-SM-79OKT 1 B1 6 pieces, target lymphoid aggregates are ~30-40% of tissue, rep delineated. 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 168 1215 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.971633 211865 0.962574 0.975823 0.737891 24938 1 76 0.0054632 119 0 6.24161e+07 0.0368646 322832 6.39625e+07 1.56325e+07 24961 3.10233e+07 0 0.224682 0.975823 0.720051 6.24161e+07 0.00671122 1.3579e+07 7.4034e+06 1.36757e+07 129 1.37684e+07 8.62396e+06 0.00608453 1.37289e+07 49.9281 0.00504721 0.980013 0 50.1774 GTEX-17HHE-1826-SM-79OKE 1 B1 6 pieces, well- preserved mucosa up to ~0.35mm, ~20-50% of thickness 7.2 Colon Colon - Transverse 0001157 173 1210 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.981077 205668 0.974217 0.984597 0.805409 22986 1 76 0.00481233 125 0 6.06838e+07 0.0247847 631391 6.16331e+07 1.33505e+07 23011 3.01704e+07 0 0.168808 0.984597 0.793004 6.06838e+07 0.00597853 1.34859e+07 7.99373e+06 1.36071e+07 138 1.36788e+07 9.64734e+06 0.00539334 1.36082e+07 49.8707 0.0102443 0.988118 0 50.2237 GTEX-17HHE-1926-SM-7EPGW 0 B1 2 pieces, fascia/vascular elements are ~15% tissue 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 386 997 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990368 164370 0.976079 0.99269 0.810184 23687 1 76 0.00298299 154 0 9.4782e+07 0.0235973 478460 9.548e+07 1.28135e+07 23720 4.72128e+07 0 0.165895 0.99269 0.804262 9.4782e+07 0.0114597 2.07621e+07 9.27841e+06 2.10914e+07 169 2.11214e+07 1.67224e+07 0.00721145 2.09378e+07 49.7817 0.0050111 0.995013 0 50.3935 GTEX-17HHE-2026-SM-79OKF 0 B1 6 pieces, trace adherent dermal fat nubbins up to ~1mm; squamous epithelium is ~40 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 386 997 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976978 190671 0.970597 0.980892 0.777078 22894 1 76 0.00499175 130 0 5.63861e+07 0.0291754 365654 5.74845e+07 1.29185e+07 22914 2.8046e+07 0 0.193519 0.980892 0.76223 5.63861e+07 0.00635669 1.23076e+07 6.31058e+06 1.2398e+07 126 1.2457e+07 8.57872e+06 0.0056715 1.24546e+07 49.9952 0.00636091 0.984807 0 50.1828 GTEX-17HHE-2126-SM-7DHLO 0 B1 2 pieces, trace-minimal interstitial fat, ,~10%, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 393 990 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990914 140910 0.980853 0.99209 0.869324 19606 1 76 0.00315648 162 0 7.4316e+07 0.0188554 497369 7.49085e+07 5.72807e+06 19615 3.70136e+07 0 0.111529 0.99209 0.862448 7.4316e+07 0.00486977 1.55381e+07 7.78834e+06 1.57735e+07 175 1.57647e+07 1.49728e+07 0.00401211 1.56181e+07 49.7666 0.00663968 0.993265 0 50.3758 GTEX-17HHE-2226-SM-7EPGN 0 B1 4 pieces, trace adherentnubbins of fat, ~1-2mm, rep delineated 6.8 Nerve Nerve - Tibial 0001323 400 983 BP-52186 RNA Extraction from Paxgene-derived Lysate Plate Based 04/29/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989562 166047 0.965945 0.991847 0.75546 25300 1 76 0.0030431 157 0 9.90398e+07 0.0337911 423567 9.9854e+07 1.23276e+07 25346 4.93245e+07 0 0.210485 0.991847 0.7493 9.90398e+07 0.0114562 2.16444e+07 9.70539e+06 2.19088e+07 171 2.19311e+07 1.49079e+07 0.00723995 2.18317e+07 49.8864 0.00424186 0.994131 0 50.3035 GTEX-17HHE-2326-SM-793C5 0 B1 2 pieces, rims/nubbin of adherent fibrous tissue, ~1mm, rep delineated 7.8 Blood Vessel Artery - Tibial 0007610 400 983 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994667 287078 0.975167 0.99565 0.829414 21513 1 76 0.00284334 159 0 7.56625e+07 0.0243934 262372 7.59931e+07 1.11468e+07 21532 3.77007e+07 0 0.145753 0.99565 0.825806 7.56625e+07 0.00320913 1.61876e+07 6.07414e+06 1.62505e+07 172 1.62687e+07 1.48264e+07 0.00302605 1.62398e+07 49.9555 0.00345258 0.996633 0 50.0969 GTEX-17HHY-0002-SM-6RBK6 C1 Blood Whole Blood 0013756 591 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17HHY-0002-SM-6UH1X C1 Blood Whole Blood 0013756 591 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17HHY-0006-SM-7MXT4 C1 8.6 Blood Whole Blood 0013756 591 BP-51144 RNA isolation_PAXgene Blood RNA (Manual) 04/04/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.953128 192494 0.983287 0.962871 0.791249 18681 1 76 0.00330555 93 0 6.81521e+07 0.015556 214069 7.07801e+07 1.18018e+07 18688 3.36481e+07 0 0.192037 0.962871 0.761871 6.81521e+07 0.0049129 1.58848e+07 1.03984e+08 1.59262e+07 109 1.6213e+07 1.72912e+07 0.00410109 1.62872e+07 50.1141 0.00302442 0.972613 0 50.065 GTEX-17HHY-0008-SM-EAZBE C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 689 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993325 597801 0.976982 0.99419 0.858311 20604 1 76 0.00165028 293 0 1.09302e+08 0.0226947 188978 1.09941e+08 7.24488e+06 20622 5.44876e+07 0 0.11867 0.99419 0.853324 1.09302e+08 0.00244497 2.45714e+07 1.70206e+07 2.46931e+07 282 2.47238e+07 2.90413e+07 0.00204728 2.46345e+07 49.9095 0.0017189 0.995055 0 50.1235 GTEX-17HHY-0011-R1a-SM-7189V C1, A1 7.2 Brain Brain - Hippocampus 0001954 610 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965031 1.10418e+06 0.944013 0.979272 0.813231 25233 1 76 0.00244241 374 0 1.11232e+08 0.0557374 6.33975e+06 1.13586e+08 5.07982e+06 25261 5.4628e+07 0 0.130782 0.979272 0.796374 1.11232e+08 0.00547954 2.36907e+07 3.29205e+07 2.39196e+07 365 2.45153e+07 9.91111e+06 0.00393889 2.45719e+07 50.0577 0.0558145 0.993514 0 50.2404 GTEX-17HHY-0011-R3a-SM-7EWDK C1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 610 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992596 282721 0.959611 0.994514 0.837575 21974 1 76 0.00215748 123 0 5.37468e+07 0.0401192 3.17444e+06 5.40433e+07 4.77915e+06 21983 2.67685e+07 0 0.122036 0.994514 0.83298 5.37468e+07 0.00315518 1.1646e+07 1.39111e+07 1.18565e+07 160 1.17926e+07 5.20995e+06 0.00265537 1.17961e+07 50.0075 0.0587389 0.996433 0 50.4479 GTEX-17HHY-0011-R5b-SM-79OMZ C1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 610 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993987 334216 0.958886 0.994434 0.832027 22135 1 76 0.00292216 148 0 6.13636e+07 0.0409107 4.39852e+06 6.1707e+07 3.49394e+06 22152 3.05874e+07 0 0.126859 0.994434 0.827396 6.13636e+07 0.00415363 1.33611e+07 1.59761e+07 1.36248e+07 200 1.35673e+07 5.04721e+06 0.00353762 1.34329e+07 49.7511 0.0712807 0.994882 0 50.4885 GTEX-17HHY-0011-R6b-SM-7189Z C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 610 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965615 707869 0.95542 0.980066 0.806072 26397 1 76 0.0024129 374 0 1.2415e+08 0.0442522 6.0694e+06 1.26675e+08 5.76153e+06 26435 6.09589e+07 0 0.149348 0.980066 0.790004 1.2415e+08 0.00535089 2.67211e+07 2.22304e+07 2.68432e+07 368 2.76991e+07 1.40533e+07 0.00386024 2.75556e+07 49.8701 0.0479131 0.994516 0 50.114 GTEX-17HHY-0011-R7a-SM-718A1 C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 610 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967755 594310 0.961401 0.981407 0.830386 23483 1 76 0.00225115 372 0 9.90967e+07 0.0384212 7.856e+06 1.00974e+08 4.51259e+06 23497 4.873e+07 0 0.131015 0.981407 0.814946 9.90967e+07 0.00511342 2.13719e+07 2.86756e+07 2.16491e+07 351 2.21598e+07 7.64473e+06 0.00366238 2.20528e+07 49.8789 0.0778021 0.995059 0 50.3222 GTEX-17HHY-0126-SM-7LG5D 0 C1 6 pieces; well trimmed; <5% dermal fat 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 688 1068 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981709 407398 0.974398 0.988056 0.819203 24971 1 76 0.00336362 243 0 9.27378e+07 0.0252755 303190 9.38588e+07 1.33865e+07 24998 4.59195e+07 0 0.155196 0.988056 0.809418 9.27378e+07 0.00545234 2.01237e+07 1.14564e+07 2.02892e+07 246 2.06084e+07 1.82977e+07 0.00440127 2.03574e+07 49.6937 0.00323028 0.994403 0 50.2047 GTEX-17HHY-0226-SM-793BQ 0 C1 2 pieces; minimal fibrous content 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 690 1066 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992821 371513 0.970222 0.99412 0.76484 23712 1 76 0.00297106 153 0 7.34763e+07 0.029465 330230 7.39109e+07 9.83715e+06 23741 3.65882e+07 0 0.205382 0.99412 0.760343 7.34763e+07 0.00366266 1.60966e+07 6.92884e+06 1.60976e+07 164 1.61496e+07 1.17533e+07 0.00331641 1.61331e+07 49.9745 0.00446795 0.995418 0 50.0016 GTEX-17HHY-0326-SM-7938H 0 C1 2 pieces; 5% internal fat content 8.7 Muscle Muscle - Skeletal 0011907 692 1064 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.995278 255072 0.981512 0.99627 0.863428 19200 1 76 0.00177636 118 0 6.12179e+07 0.0182324 492759 6.14471e+07 4.16976e+06 19211 3.0509e+07 0 0.118085 0.99627 0.860207 6.12179e+07 0.00231313 1.30995e+07 5.25414e+06 1.31561e+07 140 1.32025e+07 1.31314e+07 0.00204448 1.31091e+07 49.8224 0.00801923 0.997262 0 50.1078 GTEX-17HHY-0426-SM-7DHLC 0 C1 6 pieces; well dissected except for 1 piece with 1mm subcutaneous fat; half have prominent hair follicles 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 693 1063 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990194 166361 0.973806 0.991324 0.793735 24047 1 76 0.00364869 166 0 7.40355e+07 0.0258627 204960 7.46834e+07 5.7467e+06 24082 3.68298e+07 0 0.180071 0.991324 0.786848 7.40355e+07 0.00552319 1.62479e+07 7.97214e+06 1.63443e+07 157 1.64009e+07 1.35654e+07 0.00458487 1.62695e+07 49.7989 0.00274438 0.992454 0 50.1478 GTEX-17HHY-0526-SM-793BZ 1 C1 2 pieces: partly calcified sclerotic plaques with 50% lumen narrowed 7.7 Blood Vessel Artery - Tibial 0007610 695 1063 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993048 397543 0.973154 0.99432 0.800612 22013 1 76 0.00296546 144 0 7.5278e+07 0.0264576 312438 7.5708e+07 1.04604e+07 22040 3.74853e+07 0 0.172541 0.99432 0.796065 7.5278e+07 0.00363706 1.61905e+07 5.9959e+06 1.62381e+07 162 1.6278e+07 1.40182e+07 0.00330083 1.62404e+07 49.9422 0.00412688 0.995592 0 50.0735 GTEX-17HHY-0626-SM-7EPGF 0 C1 2 pieces; 30% internal fat content 6.7 Nerve Nerve - Tibial 0001323 696 1062 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990228 305729 0.965582 0.992503 0.719268 26841 1 76 0.00319706 149 0 1.03218e+08 0.0340917 296685 1.03998e+08 1.33627e+07 26899 5.14047e+07 0 0.246314 0.992503 0.713876 1.03218e+08 0.0114465 2.26638e+07 1.04495e+07 2.27964e+07 162 2.29195e+07 1.54422e+07 0.00731234 2.27573e+07 49.8225 0.0028528 0.994778 0 50.1459 GTEX-17HHY-0726-SM-7IGM6 1 C1 2 pieces; active spermatogenesis 6 Testis Testis 0000473 698 1062 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992585 722389 0.921394 0.993656 0.729825 33841 1 76 0.00199629 228 0 1.02583e+08 0.0782538 807432 1.03238e+08 5.81854e+06 33905 5.11086e+07 0 0.191569 0.993656 0.725194 1.02583e+08 0.00288013 2.09853e+07 1.38865e+07 2.11233e+07 253 2.11472e+07 1.65747e+07 0.00243773 2.10539e+07 49.8895 0.00782109 0.994727 0 50.1638 GTEX-17HHY-0826-SM-7EPID 1 C1 2 pieces; focal fibrosis 6.8 Thyroid Thyroid 0002046 709 1051 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990653 325410 0.966423 0.992931 0.778835 24319 1 76 0.00315373 128 0 8.53948e+07 0.0332506 289177 8.60028e+07 1.1498e+07 24347 4.25264e+07 0 0.187588 0.992931 0.773329 8.53948e+07 0.0115091 1.8652e+07 1.30269e+07 1.88327e+07 142 1.88944e+07 1.49734e+07 0.00732181 1.87712e+07 49.8366 0.00336241 0.995208 0 50.2411 GTEX-17HHY-0926-SM-793C1 1 C1 2 pieces; fibrofatty tissue with about a dozen ducts in fibrous component; 70% fat 7.8 Breast Breast - Mammary Tissue 0008367 712 1049 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992499 427201 0.968089 0.9939 0.741523 24738 1 76 0.00303819 140 0 6.82402e+07 0.0314775 222646 6.8659e+07 9.52424e+06 24772 3.39662e+07 0 0.226567 0.9939 0.737 6.82402e+07 0.00367162 1.50298e+07 6.44783e+06 1.50296e+07 146 1.51021e+07 1.09356e+07 0.00335446 1.50482e+07 49.9107 0.00324278 0.995302 0 49.9996 GTEX-17HHY-1026-SM-7LG5E 0 C1 2 pieces; <2% fibrovascular content 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 715 1046 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.974959 503076 0.970482 0.983438 0.799463 25046 1 76 0.00360013 211 0 9.41456e+07 0.029181 396529 9.57311e+07 1.51118e+07 25073 4.64886e+07 0 0.171019 0.983438 0.786222 9.41456e+07 0.00573114 2.0339e+07 1.32669e+07 2.06521e+07 250 2.10452e+07 1.61961e+07 0.00465645 2.07062e+07 49.5941 0.00414211 0.991917 0 50.382 GTEX-17HHY-1426-SM-7EWDQ 0 C1 2 pieces; 5% fibrosis; 5% internal fat 6.4 Heart Heart - Left Ventricle 0006566 721 1043 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.986902 178367 0.982575 0.98885 0.824609 19503 1 76 0.00205151 182 0 6.17918e+07 0.017334 3.46647e+06 6.24886e+07 5.6208e+06 19510 3.07307e+07 0 0.157966 0.98885 0.815415 6.17918e+07 0.00341769 1.33473e+07 3.09197e+07 1.36064e+07 210 1.36283e+07 4.66822e+06 0.00273325 1.34107e+07 49.5976 0.0554737 0.990798 0 50.4806 GTEX-17HHY-1726-SM-7EWD7 1 C1 6 pieces; well dissected muscle 6.3 Esophagus Esophagus - Muscularis 0004648 729 1037 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991257 128190 0.968899 0.993065 0.813385 22726 1 76 0.00237289 197 0 7.57141e+07 0.030923 1.81588e+06 7.62428e+07 6.5179e+06 22749 3.76906e+07 0 0.155513 0.993065 0.807745 7.57141e+07 0.00348469 1.65042e+07 8.40099e+06 1.67087e+07 239 1.66667e+07 8.2736e+06 0.00292778 1.66713e+07 50.0069 0.0238171 0.994874 0 50.3078 GTEX-17HHY-2226-SM-7KFS4 1 C1 2 pieces;: 1 fat-free. other 50% fat 6.6 Adrenal Gland Adrenal Gland 0002369 738 1030 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992051 375624 0.959406 0.993914 0.794499 22563 1 76 0.00307507 200 0 7.73338e+07 0.0403752 3.55913e+06 7.78073e+07 6.496e+06 22586 3.84899e+07 0 0.164907 0.993914 0.789663 7.73338e+07 0.00293047 1.64109e+07 1.55949e+07 1.68485e+07 238 1.68327e+07 8.46736e+06 0.0030029 1.65664e+07 49.6013 0.0457429 0.995776 0 50.6579 GTEX-17HHY-2326-SM-7KFSR 2 C1 6 pieces; moderate diffuse interstitial fibrosis; no glomerular sclerosis 6.5 Kidney Kidney - Cortex 0001225 740 1028 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990804 423142 0.961226 0.99324 0.827131 23057 1 76 0.00266429 264 0 8.07163e+07 0.0385975 3.56891e+06 8.12657e+07 6.06902e+06 23074 4.01565e+07 0 0.134095 0.99324 0.82154 8.07163e+07 0.0030457 1.76538e+07 2.77575e+07 1.79729e+07 317 1.8066e+07 7.11946e+06 0.00285453 1.77354e+07 49.5383 0.0439165 0.995676 0 50.4479 GTEX-17HHY-2526-SM-7IGME 3 C1 2 pieces; glands severely autolyzed, stroma intact 6.1 Prostate Prostate 0002367 747 1021 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992388 620706 0.963737 0.993555 0.787969 26467 1 76 0.00212825 376 0 1.40069e+08 0.0359319 2.49735e+06 1.40978e+08 8.7662e+06 26514 6.97539e+07 0 0.175768 0.993555 0.782891 1.40069e+08 0.00313201 3.06886e+07 2.00707e+07 3.12099e+07 384 3.11416e+07 1.66239e+07 0.00262954 3.09144e+07 49.8169 0.0177145 0.994723 0 50.421 GTEX-17HHY-2926-SM-79OJW 2 C1 4 pieces 7.2 Brain Brain - Cerebellum 0002037 765 1004 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973598 489898 0.932001 0.977414 0.694714 23404 1 76 0.00554436 97 0 5.92459e+07 0.0676458 802048 6.0615e+07 1.45554e+07 23432 2.94547e+07 0 0.237287 0.977414 0.679023 5.92459e+07 0.00658237 1.25578e+07 2.05306e+07 1.26798e+07 118 1.27856e+07 6.72274e+06 0.00606134 1.26623e+07 49.7578 0.0132318 0.98123 0 50.2418 GTEX-17HHY-3026-SM-79OKP 2 C1 pieces 7.1 Brain Brain - Cortex 0001870 768 1001 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975522 346155 0.962909 0.979815 0.823608 23251 1 76 0.00511305 126 0 6.02978e+07 0.0366765 1.65062e+06 6.154e+07 1.4738e+07 23265 2.99766e+07 0 0.139302 0.979815 0.806983 6.02978e+07 0.00654214 1.31579e+07 9.53405e+06 1.33096e+07 152 1.33805e+07 7.4294e+06 0.00582446 1.33209e+07 49.8885 0.0268219 0.984108 0 50.2865 GTEX-17HHY-3126-SM-7KFSG 2 C1 1 piece; fragmented posterior lobe 7.1 Pituitary Pituitary 0000007 770 1000 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.98988 444305 0.95112 0.992545 0.756612 25720 1 76 0.00313299 163 0 7.92198e+07 0.0486461 371322 7.98148e+07 6.72872e+06 25757 3.93764e+07 0 0.194508 0.992545 0.750971 7.92198e+07 0.00301624 1.65977e+07 1.59241e+07 1.69152e+07 195 1.69544e+07 1.08534e+07 0.00307477 1.67657e+07 49.7203 0.0046523 0.99521 0 50.4737 GTEX-17HII-0004-SM-6RBK8 C1 Blood Whole Blood 0013756 443 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17HII-0004-SM-6UH1Z C1 Blood Whole Blood 0013756 443 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17HII-0005-SM-7MKF6 C1 8.1 Blood Whole Blood 0013756 443 BP-51144 RNA isolation_PAXgene Blood RNA (Manual) 04/04/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.956253 379711 0.984261 0.962435 0.800234 17626 1 76 0.00367611 110 0 9.20676e+07 0.0143861 182708 9.56611e+07 1.33523e+07 17633 4.55569e+07 0 0.184027 0.962435 0.770173 9.20676e+07 0.00549752 2.17872e+07 1.49081e+08 2.15601e+07 140 2.18378e+07 2.4667e+07 0.00458097 2.21147e+07 50.3151 0.00190995 0.968617 0 49.7381 GTEX-17HII-0008-SM-EAZBF C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 599 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992089 849410 0.95269 0.993188 0.820347 21090 1 76 0.00172352 295 0 1.08547e+08 0.0469536 383035 1.09291e+08 8.22146e+06 21110 5.40995e+07 0 0.132344 0.993188 0.814758 1.08547e+08 0.00265054 2.36676e+07 4.43396e+07 2.40583e+07 270 2.40878e+07 2.79714e+07 0.00218651 2.37621e+07 49.6597 0.00350472 0.994287 0 50.4093 GTEX-17HII-0011-R10a-SM-79OMY C1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 462 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993776 277420 0.958998 0.994154 0.852893 21723 1 76 0.00305492 150 0 5.76665e+07 0.0406634 4.09259e+06 5.80056e+07 3.16078e+06 21733 2.87498e+07 0 0.106105 0.994154 0.847907 5.76665e+07 0.00422832 1.25923e+07 1.38141e+07 1.28133e+07 169 1.27225e+07 5.81132e+06 0.0036414 1.26913e+07 49.9387 0.0705551 0.994531 0 50.4348 GTEX-17HII-0011-R11b-SM-7KFSX C1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 462 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989722 631547 0.936939 0.991881 0.725012 24433 1 76 0.00312704 271 0 9.24503e+07 0.0626995 1.29082e+06 9.32071e+07 7.31963e+06 24467 4.59481e+07 0 0.211926 0.991881 0.719126 9.24503e+07 0.0032934 1.95435e+07 2.27818e+07 1.99212e+07 260 1.99454e+07 1.04516e+07 0.00321004 1.97092e+07 49.7022 0.0138489 0.994039 0 50.4786 GTEX-17HII-0011-R1b-SM-7MGVW C1, A1 5.6 Brain Brain - Hippocampus 0001954 462 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992554 321626 0.963439 0.994801 0.855859 21478 1 76 0.0028447 198 0 6.66073e+07 0.0363881 8.13533e+06 6.69554e+07 5.18558e+06 21487 3.31781e+07 0 0.10758 0.994801 0.851409 6.66073e+07 0.00370638 1.45896e+07 1.81661e+07 1.49739e+07 241 1.47819e+07 4.63045e+06 0.00327457 1.49e+07 50.199 0.121504 0.997049 0 50.65 GTEX-17HII-0011-R3a-SM-7LT9D C1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 462 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987028 702115 0.955113 0.991247 0.827048 24083 1 76 0.00285776 270 0 1.00793e+08 0.04459 8.64689e+06 1.01683e+08 1.18409e+07 24104 5.00499e+07 0 0.128065 0.991247 0.819808 1.00793e+08 0.00387686 2.17374e+07 3.3017e+07 2.20387e+07 297 2.20186e+07 8.78401e+06 0.00336514 2.21175e+07 50.112 0.0850379 0.995465 0 50.3442 GTEX-17HII-0011-R5a-SM-7LG51 C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 462 BP-52533 RNA isolation_PAXgene Tissue miRNA 05/08/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980387 924190 0.942715 0.984671 0.787828 24420 1 76 0.00355666 200 0 7.83025e+07 0.0569543 4.08758e+06 7.95214e+07 1.17153e+07 24446 3.88449e+07 0 0.154887 0.984671 0.775752 7.83025e+07 0.00493626 1.66826e+07 3.66766e+07 1.6782e+07 237 1.68671e+07 8.69528e+06 0.00424346 1.69055e+07 50.0569 0.0514023 0.988955 0 50.1484 GTEX-17HII-0011-R7a-SM-79OMS C1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 462 BP-52139 RNA isolation_PAXgene Tissue miRNA 04/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992768 434174 0.962397 0.993242 0.834901 21588 1 76 0.00309545 195 0 6.49983e+07 0.0374266 5.25107e+06 6.54405e+07 3.47476e+06 21602 3.23919e+07 0 0.127496 0.993242 0.829259 6.49983e+07 0.00426727 1.403e+07 2.20672e+07 1.45279e+07 212 1.43203e+07 5.00957e+06 0.00368108 1.42483e+07 49.874 0.0802418 0.993716 0 50.8717 GTEX-17HII-0011-R8a-SM-79OK6 C1, A1 7.1 Brain Brain - Hypothalamus 0001898 462 BP-52434 RNA isolation_PAXgene Tissue miRNA 05/06/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976116 374201 0.957802 0.980026 0.824813 23774 1 76 0.00531466 128 0 6.21995e+07 0.0418944 3.31494e+06 6.34672e+07 1.53058e+07 23791 3.09407e+07 0 0.132989 0.980026 0.808338 6.21995e+07 0.0064997 1.34787e+07 1.46838e+07 1.36947e+07 159 1.37339e+07 6.83212e+06 0.00590482 1.36585e+07 49.8624 0.0522308 0.983937 0 50.3975 GTEX-17HII-0126-SM-7KFSS 1 C1 2 pieces, spermatogenesis is present 6.4 Testis Testis 0000473 597 802 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991408 387146 0.917958 0.992897 0.725703 33060 1 76 0.0029816 164 0 8.17449e+07 0.081639 588193 8.23297e+07 6.22988e+06 33119 4.06835e+07 0 0.192254 0.992897 0.720548 8.17449e+07 0.00284323 1.64579e+07 1.20437e+07 1.66821e+07 158 1.67206e+07 1.40982e+07 0.00291252 1.65326e+07 49.7173 0.00714436 0.994385 0 50.3383 GTEX-17HII-0226-SM-7LG4E 0 C1 6 pieces, no adherent dermal fat; squamous epithelium is ~45-50 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 599 801 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.96037 286734 0.976806 0.966457 0.812259 23367 1 76 0.00341964 239 0 9.0917e+07 0.0228702 475542 9.40725e+07 1.30707e+07 23400 4.50202e+07 0 0.164547 0.966457 0.785013 9.0917e+07 0.0055586 1.98106e+07 1.11923e+07 2.00291e+07 237 2.02813e+07 1.76273e+07 0.00448239 2.00959e+07 49.7705 0.00505506 0.972543 0 50.2742 GTEX-17HII-0326-SM-7LG4X 0 C1 2 pieces, ~15% fascia/vascular elements, rep. delineated 6 Adipose Tissue Adipose - Subcutaneous 0002190 601 799 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977968 440050 0.973964 0.985588 0.783086 23973 1 76 0.00353518 279 0 1.028e+08 0.0257446 730335 1.04303e+08 1.55079e+07 24018 5.08288e+07 0 0.190877 0.985588 0.7718 1.028e+08 0.00559083 2.24207e+07 1.25142e+07 2.26985e+07 271 2.30814e+07 1.72621e+07 0.00455506 2.27811e+07 49.6725 0.00700206 0.993207 0 50.3079 GTEX-17HII-0426-SM-793A3 0 C1 2 pieces, <~10% interstitial fat, rep delineated 8.9 Muscle Muscle - Skeletal 0011907 603 797 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993718 314825 0.978442 0.994739 0.841812 19511 1 76 0.00201611 109 0 5.52989e+07 0.0212408 476880 5.55914e+07 4.62477e+06 19521 2.75203e+07 0 0.13663 0.994739 0.837383 5.52989e+07 0.00269957 1.16928e+07 4.67856e+06 1.16754e+07 122 1.17494e+07 1.18358e+07 0.00235749 1.1674e+07 49.8391 0.00857831 0.99576 0 49.9626 GTEX-17HII-0526-SM-7DHLP 0 C1 2 pieces, nubbin of adherent fat up to ~2.5mm, delineated 7.9 Nerve Nerve - Tibial 0001323 625 776 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989723 123979 0.970603 0.99086 0.761308 23350 1 76 0.00363873 174 0 7.57003e+07 0.0290888 294696 7.63986e+07 6.07385e+06 23379 3.76574e+07 0 0.209295 0.99086 0.75435 7.57003e+07 0.00546486 1.6727e+07 6.69330e+06 1.68392e+07 161 1.68826e+07 1.26083e+07 0.00455074 1.67641e+07 49.8239 0.00385735 0.991998 0 50.1672 GTEX-17HII-0626-SM-7LT9H 0 C1 2 pieces, no atherosis, no adherent fat 8.4 Blood Vessel Artery - Tibial 0007610 626 775 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988484 232793 0.974896 0.991823 0.817578 22367 1 76 0.00258425 279 0 9.63729e+07 0.0246828 402386 9.71674e+07 1.06745e+07 22394 4.78948e+07 0 0.157318 0.991823 0.810893 9.63729e+07 0.00387329 2.06705e+07 9.13772e+06 2.08428e+07 258 2.10001e+07 1.92116e+07 0.0032266 2.08112e+07 49.774 0.00414116 0.995162 0 50.2076 GTEX-17HII-0826-SM-7DUFH 0 C1 2 pieces, minimal interstitial fascia/vascular elements 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 652 750 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991901 253028 0.973025 0.992657 0.746321 23795 1 76 0.0029798 164 0 8.10467e+07 0.0266361 271851 8.16463e+07 7.40131e+06 23835 4.03459e+07 0 0.226704 0.992657 0.74084 8.10467e+07 0.00427776 1.79127e+07 1.09433e+07 1.80212e+07 170 1.80746e+07 1.37207e+07 0.00362829 1.79231e+07 49.7895 0.00332962 0.993412 0 50.151 GTEX-17HII-0926-SM-79ON7 1 C1 2 pieces, moderate-severe alveolar edema/congestion 6.5 Lung Lung 0008952 655 748 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991596 158281 0.969599 0.991192 0.70331 23632 1 76 0.00344602 119 0 6.54876e+07 0.0300921 233685 6.60696e+07 4.15282e+06 23664 3.25647e+07 0 0.266289 0.991192 0.697115 6.54876e+07 0.00469754 1.44446e+07 6.76486e+06 1.44382e+07 134 1.44495e+07 9.10025e+06 0.00407203 1.44096e+07 49.9309 0.00353695 0.990788 0 49.9889 GTEX-17HII-1026-SM-7IGLY 1 C1 2 pieces mild-moderate passive congestion 6 Liver Liver 0001114 657 746 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994707 323221 0.978673 0.995589 0.823298 21917 1 76 0.0022074 267 0 9.7954e+07 0.0211348 1.48998e+06 9.83881e+07 6.35183e+06 21935 4.8823e+07 0 0.155376 0.995589 0.819666 9.7954e+07 0.0029269 2.1306e+07 1.341e+07 2.1757e+07 327 2.17257e+07 1.50056e+07 0.00256683 2.14196e+07 49.6453 0.0151439 0.99647 0 50.5235 GTEX-17HII-1126-SM-7IGOP 1 C1 2 pieces, ~20% occlusive atherosis, delineated 5.9 Blood Vessel Artery - Coronary 0001621 660 744 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993691 148750 0.965752 0.99396 0.716007 23637 1 76 0.00222866 131 0 6.72967e+07 0.0339256 294055 6.77056e+07 3.09959e+06 23669 3.351e+07 0 0.249745 0.99396 0.711683 6.72967e+07 0.00265677 1.45833e+07 6.60231e+06 1.46918e+07 148 1.46967e+07 9.6756e+06 0.00244265 1.46028e+07 49.8398 0.00434314 0.994229 0 50.1854 GTEX-17HII-1326-SM-7IGOB 1 C1 2 pieces diffuse subacute myocardial infarct involves ~80% of aliquots (rep foci delineated) 5.9 Heart Heart - Left Ventricle 0006566 664 741 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994765 167594 0.972863 0.994848 0.776673 22892 1 76 0.0019963 138 0 6.88774e+07 0.0268776 1.9396e+06 6.92342e+07 3.25255e+06 22916 3.43198e+07 0 0.19619 0.994848 0.772671 6.88774e+07 0.00251685 1.52304e+07 8.87536e+06 1.54043e+07 160 1.54203e+07 1.14504e+07 0.00225655 1.52265e+07 49.6839 0.0280151 0.99493 0 50.2839 GTEX-17HII-1426-SM-7EPGG 0 C1 6 pieces, minimal dermal fat, squamous epithelium is ~50-60 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 665 740 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990153 186703 0.967439 0.99241 0.776899 23100 1 76 0.00313492 139 0 7.99666e+07 0.0323692 638916 8.05782e+07 9.92292e+06 23128 3.98347e+07 0 0.19054 0.99241 0.771002 7.99666e+07 0.0116704 1.74845e+07 1.14867e+07 1.77094e+07 145 1.77082e+07 1.16391e+07 0.00739294 1.76567e+07 49.9271 0.00792914 0.994667 0 50.3196 GTEX-17HII-1526-SM-9OSVD 1 C1 6 pieces, squamous mucosa ~0.5mm, ~ 50% thickness. Incidental submucosal mucus gland encircled 6.4 Esophagus Esophagus - Mucosa 0006920 666 740 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.947491 289085 0.972452 0.950288 0.82964 23166 1 76 0.00269029 370 0 1.03343e+08 0.0273452 1.8108e+06 1.08749e+08 9.75827e+06 23187 5.14017e+07 0 0.142812 0.950288 0.788397 1.03343e+08 0.00427839 2.2964e+07 1.38365e+07 2.3222e+07 343 2.32802e+07 1.45806e+07 0.003482 2.31962e+07 49.9096 0.0166512 0.953085 0 50.2793 GTEX-17HII-1726-SM-9OSVB 1 C1 6 pieces confirmed target muscularis 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 669 738 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990156 197598 0.971002 0.992957 0.809591 23064 1 76 0.00268873 268 0 9.11263e+07 0.0288269 2.04397e+06 9.17727e+07 9.13079e+06 23092 4.53252e+07 0 0.161411 0.992957 0.803889 9.11263e+07 0.00389726 1.97564e+07 9.41922e+06 2.00887e+07 310 2.00798e+07 1.14136e+07 0.00329129 2.00029e+07 49.9041 0.0222721 0.995757 0 50.417 GTEX-17HII-1826-SM-7DUFQ 1 C1 6 pieces atherosis up to ~1.5mm thick 7.3 Blood Vessel Artery - Aorta 0001496 671 737 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442,LCSET-6865 02/18/2015 TruSeq.v1 RNASEQ 0.98895 261625 0.971833 0.990869 0.748727 23390 1 76 0.00244222 212 0 9.99702e+07 0.0277778 182999 1.00891e+08 6.73605e+06 23427 4.97258e+07 0 0.223106 0.990869 0.741891 9.99702e+07 0.00330122 2.16096e+07 8.86322e+06 2.16604e+07 248 2.16896e+07 1.64144e+07 0.00287088 2.17697e+07 50.0922 0.00181382 0.992789 0 50.0588 GTEX-17HII-1926-SM-79OLB 1 C1 2 pieces, no abnormalities 7 Thyroid Thyroid 0002046 673 735 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.975161 253385 0.96694 0.979248 0.71385 23498 1 76 0.00495156 118 0 6.13851e+07 0.0328053 140309 6.2686e+07 1.39652e+07 23524 3.04973e+07 0 0.253089 0.979248 0.699037 6.13851e+07 0.00631931 1.34698e+07 6.36441e+06 1.34723e+07 121 1.35872e+07 9.09346e+06 0.00563258 1.35945e+07 50.0134 0.00223828 0.983335 0 50.0045 GTEX-17HII-2426-SM-7KFTT 2 C1 6 pieces, target mucosa up tp ~1mm thick, ~50% thickness, moderately advanced autolysis 6.3 Stomach Stomach 0000945 683 727 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.978254 147173 0.983331 0.97963 0.868533 22061 1 76 0.00252541 472 0 9.69366e+07 0.0160233 1.20288e+06 9.89523e+07 7.18356e+06 22072 4.82717e+07 0 0.114798 0.97963 0.850841 9.69366e+07 0.00246205 2.26427e+07 1.37881e+08 2.27908e+07 387 2.27999e+07 2.62998e+07 0.00249378 2.27748e+07 49.9725 0.0121561 0.981006 0 50.163 GTEX-17HII-2526-SM-7LT8C 2 C1 2 pieces, glandular elements with moderately/markedly advanced autolysis 6.3 Prostate Prostate 0002367 686 725 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.985511 200268 0.964829 0.988845 0.755496 24775 1 76 0.00300854 161 0 7.63637e+07 0.0349122 1.47508e+06 7.72251e+07 9.03554e+06 24813 3.79028e+07 0 0.209333 0.988845 0.747068 7.63637e+07 0.00413005 1.67544e+07 1.00867e+07 1.69693e+07 188 1.70458e+07 9.6607e+06 0.00356741 1.69235e+07 49.8201 0.019101 0.99218 0 50.3185 GTEX-17HII-2726-SM-7MGVM 2 C1 6 pieces, target mucosa is ~0.35mm, ~25% thickness, moderately advanced autolysis 5.6 Colon Colon - Transverse 0001157 692 720 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.987014 114125 0.970096 0.989224 0.781799 23742 1 76 0.00282591 137 0 6.50059e+07 0.0295184 1.37994e+06 6.57141e+07 4.98506e+06 23764 3.23484e+07 0 0.188297 0.989224 0.773374 6.50059e+07 0.00389029 1.41916e+07 7.3926e+06 1.43493e+07 156 1.43396e+07 8.93846e+06 0.00335691 1.43395e+07 49.9999 0.0209992 0.991433 0 50.2764 GTEX-17HII-2926-SM-79OMK 1 C1 4 pieces, no abnormalities 6.6 Brain Brain - Cerebellum 0002037 725 688 BP-52241 RNA Extraction from Paxgene-derived Lysate Plate Based 04/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991696 489900 0.933422 0.991875 0.702541 23415 1 76 0.00340044 125 0 6.56775e+07 0.0662877 1.45447e+06 6.62155e+07 3.8232e+06 23436 3.26917e+07 0 0.230881 0.991875 0.696833 6.56775e+07 0.0046067 1.40147e+07 2.27484e+07 1.42141e+07 143 1.42318e+07 6.75296e+06 0.00400346 1.40073e+07 49.6026 0.0219657 0.992055 0 50.3532 GTEX-17HII-3026-SM-7EWFM 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 727 686 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993583 284432 0.959409 0.995166 0.823052 21913 1 76 0.00229134 122 0 5.61449e+07 0.0402616 3.13615e+06 5.64177e+07 4.6139e+06 21924 2.79785e+07 0 0.136358 0.995166 0.819073 5.61449e+07 0.00315236 1.21102e+07 1.9118e+07 1.23623e+07 154 1.22738e+07 6.21788e+06 0.00272116 1.22732e+07 49.9988 0.0555881 0.996748 0 50.5152 GTEX-17HII-3126-SM-7KFRX 1 C1 1 piece, all adenohypophysis 6.5 Pituitary Pituitary 0000007 728 686 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990055 465343 0.955288 0.992498 0.77574 25174 1 76 0.00306259 200 0 8.16752e+07 0.0445113 886336 8.22925e+07 6.547e+06 25209 4.06043e+07 0 0.179548 0.992498 0.769921 8.16752e+07 0.00322384 1.7367e+07 1.3778e+07 1.77467e+07 214 1.7778e+07 1.035e+07 0.00314302 1.75315e+07 49.651 0.0107706 0.994942 0 50.5406 GTEX-17JCI-0004-SM-6RBKB C1 Blood Whole Blood 0013756 416 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17JCI-0004-SM-6UH23 C1 Blood Whole Blood 0013756 416 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17JCI-0005-SM-7P8OL C1 9.2 Blood Whole Blood 0013756 416 BP-51144 RNA isolation_PAXgene Blood RNA (Manual) 04/04/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.978748 383531 0.978594 0.980565 0.801347 19376 1 76 0.00282973 152 0 9.31569e+07 0.0207944 357037 9.50033e+07 1.32931e+07 19390 4.63861e+07 0 0.177247 0.980565 0.785773 9.31569e+07 0.00373925 2.14752e+07 1.04534e+08 2.1581e+07 202 2.16466e+07 2.21232e+07 0.00328365 2.15782e+07 49.921 0.00375815 0.982382 0 50.1228 GTEX-17JCI-0008-SM-EAZBG C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 561 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99367 346414 0.98171 0.994561 0.86632 20229 1 76 0.00165642 230 0 8.99517e+07 0.0179593 183244 9.04436e+07 6.62286e+06 20248 4.48558e+07 0 0.11539 0.994561 0.861608 8.99517e+07 0.00249148 2.0251e+07 9.91324e+06 2.0373e+07 225 2.03752e+07 2.44951e+07 0.00207358 2.03275e+07 49.9414 0.00202606 0.995453 0 50.1501 GTEX-17JCI-0011-R10b-SM-718A2 C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 435 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.962659 607287 0.955811 0.978065 0.818907 25213 1 76 0.00243441 371 0 9.57432e+07 0.0437724 3.35411e+06 9.78904e+07 4.88814e+06 25248 4.69386e+07 0 0.136904 0.978065 0.800944 9.57432e+07 0.00568323 2.05896e+07 1.81262e+07 2.06217e+07 336 2.13411e+07 1.13662e+07 0.00403324 2.12751e+07 49.9225 0.0342639 0.99347 0 50.039 GTEX-17JCI-0011-R11a-SM-7189Y C1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 435 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968489 835024 0.945158 0.980894 0.752436 24944 1 76 0.00268752 373 0 1.16679e+08 0.0545049 2.79011e+06 1.18952e+08 5.49387e+06 24983 5.73897e+07 0 0.192722 0.980894 0.73806 1.16679e+08 0.00542285 2.48247e+07 2.32614e+07 2.4923e+07 333 2.56661e+07 1.25026e+07 0.00403789 2.54498e+07 49.7885 0.0234558 0.9933 0 50.0988 GTEX-17JCI-0011-R1b-SM-718A3 C1, A1 6.9 Brain Brain - Hippocampus 0001954 435 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966531 554786 0.960038 0.980729 0.835277 24050 1 76 0.00239679 268 0 9.07309e+07 0.0396488 6.51296e+06 9.25138e+07 4.13178e+06 24072 4.45784e+07 0 0.124762 0.980729 0.81918 9.07309e+07 0.00542798 1.96624e+07 2.05416e+07 1.98413e+07 329 2.04007e+07 9.38874e+06 0.00389045 2.02993e+07 49.8755 0.0703999 0.994927 0 50.2265 GTEX-17JCI-0011-R6a-SM-72D6D C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 435 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.993657 207509 0.970094 0.995345 0.85226 21883 1 76 0.00244203 153 0 6.03231e+07 0.029706 4.96411e+06 6.06053e+07 4.63584e+06 21899 3.00506e+07 0 0.117834 0.995345 0.848292 6.03231e+07 0.00322378 1.33153e+07 1.26896e+07 1.33917e+07 199 1.33548e+07 4.89415e+06 0.00283224 1.34354e+07 50.1504 0.0819089 0.997033 0 50.143 GTEX-17JCI-0126-SM-7LG5G 1 C1 6 pieces; well trimmed, but with 30-40% dermal fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 561 1425 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977432 457889 0.974607 0.985497 0.849187 23504 1 76 0.00346436 359 0 9.47348e+07 0.0250323 328221 9.6129e+07 1.53571e+07 23527 4.68231e+07 0 0.125421 0.985497 0.836871 9.47348e+07 0.00537577 1.99678e+07 1.50622e+07 2.02017e+07 274 2.05707e+07 1.89777e+07 0.00441224 2.03075e+07 49.6781 0.00341438 0.993562 0 50.2911 GTEX-17JCI-0326-SM-7LG5H 1 C1 2 pieces; 15% internal fat 8.4 Muscle Muscle - Skeletal 0011907 566 1421 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983285 412500 0.984837 0.988615 0.874986 20261 1 76 0.00299098 270 0 1.04135e+08 0.0148983 1.49835e+06 1.05334e+08 1.38772e+07 20276 5.16323e+07 0 0.109851 0.988615 0.865025 1.04135e+08 0.00517375 2.27194e+07 1.9367e+07 2.24498e+07 262 2.2694e+07 2.15401e+07 0.00407648 2.29556e+07 50.2865 0.0142247 0.993946 0 49.7015 GTEX-17JCI-0426-SM-7LG4R 1 C1 2 pieces; 5% internal fat; well trimmed 6.2 Nerve Nerve - Tibial 0001323 569 1418 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983123 227016 0.969628 0.987423 0.799369 24427 1 76 0.00340561 210 0 8.7657e+07 0.0300908 516155 8.87735e+07 1.17788e+07 24456 4.34651e+07 0 0.170259 0.987423 0.789316 8.7657e+07 0.00543936 1.91142e+07 9.92464e+06 1.93657e+07 211 1.94804e+07 1.48945e+07 0.00441806 1.93598e+07 49.8447 0.00581429 0.991723 0 50.3267 GTEX-17JCI-0626-SM-7IGM7 2 C1 2 pieces; well dissected 6.2 Thyroid Thyroid 0002046 579 1409 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993635 153479 0.965898 0.994384 0.724893 24055 1 76 0.00219701 159 0 7.61813e+07 0.033856 433793 7.66116e+07 5.02066e+06 24093 3.7983e+07 0 0.241005 0.994384 0.720822 7.61813e+07 0.00268682 1.66601e+07 9.10884e+06 1.68685e+07 175 1.68491e+07 1.00465e+07 0.00244173 1.67355e+07 49.8308 0.00566224 0.995134 0 50.3109 GTEX-17JCI-0726-SM-7EPH1 1 C1 2 pieces; atrophic ducts (circled) confined to 1 piece; fat comprises >95% 6.8 Breast Breast - Mammary Tissue 0008367 580 1409 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990306 277872 0.974221 0.992499 0.754604 25217 1 76 0.00312842 141 0 9.49379e+07 0.0253835 390707 9.56554e+07 1.21216e+07 25261 4.7248e+07 0 0.219617 0.992499 0.748943 9.49379e+07 0.0115636 2.093e+07 1.04915e+07 2.10799e+07 159 2.11332e+07 1.54758e+07 0.0073367 2.10716e+07 49.927 0.00408453 0.994692 0 50.1783 GTEX-17JCI-0826-SM-7LT8W 1 C1 2 pieces; 10% internal fat content 7.3 Heart Heart - Atrial Appendage 0006631 582 1407 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990955 266718 0.978974 0.993557 0.798755 22681 1 76 0.00262663 269 0 9.48326e+07 0.0204773 2.13306e+06 9.54476e+07 9.75484e+06 22709 4.71599e+07 0 0.180219 0.993557 0.793609 9.48326e+07 0.00357041 2.02997e+07 1.13413e+07 2.04804e+07 263 2.04951e+07 1.47902e+07 0.00309728 2.04957e+07 50.0007 0.0223479 0.99616 0 50.2216 GTEX-17JCI-1126-SM-7IGMM 1 C1 2 pieces; patchy hypereosinophilia [delineated] may indicate early ischemia 6 Heart Heart - Left Ventricle 0006566 588 1403 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992016 347910 0.982552 0.992852 0.841016 19290 1 76 0.00181594 368 0 1.05134e+08 0.0173929 5.61198e+06 1.05891e+08 6.59470e+06 19299 5.24484e+07 0 0.141536 0.992852 0.835004 1.05134e+08 0.00232309 2.22054e+07 5.30399e+07 2.35917e+07 354 2.3099e+07 5.92534e+06 0.0020693 2.27227e+07 49.5894 0.0529979 0.993688 0 51.5135 GTEX-17JCI-1226-SM-793D9 1 C1 6 pieces; well preserved; submucosal glands occupy 5-10% in each piece 7.7 Esophagus Esophagus - Mucosa 0006920 592 1399 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994324 257812 0.975203 0.995367 0.792832 21334 1 76 0.00293075 132 0 6.67467e+07 0.0245866 431950 6.70574e+07 9.3546e+06 21352 3.32757e+07 0 0.182371 0.995367 0.789159 6.67467e+07 0.00336694 1.50225e+07 8.44122e+06 1.50334e+07 154 1.50661e+07 1.06644e+07 0.00314862 1.50581e+07 49.9867 0.0064415 0.99641 0 50.0181 GTEX-17JCI-1326-SM-7IGLZ 1 C1 6 pieces; scattered skeletal muscle fibers in 1 piece [circled] <1% 6 Esophagus Esophagus - Muscularis 0004648 593 1399 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445,LCSET-7010,LCSET-7084 04/23/2015 TruSeq.v1 RNASEQ 0.99205 175483 0.970252 0.992573 0.806253 22531 1 76 0.00483743 198 0 7.37696e+07 0.0295754 2.06576e+06 7.43216e+07 1.06235e+07 22556 3.67522e+07 0 0.163998 0.992573 0.800265 7.37696e+07 0.00225656 1.54409e+07 8.35883e+06 1.68641e+07 224 1.6792e+07 8.25448e+06 0.00354767 1.55418e+07 48.0668 0.0277949 0.993096 0 52.2027 GTEX-17JCI-1426-SM-7MGW4 1 C1 6 pieces; well dissected target muscle 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 595 1398 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.986751 156292 0.971256 0.989633 0.820981 22623 1 76 0.0027013 153 0 7.16488e+07 0.0285839 1.95508e+06 7.23993e+07 5.76606e+06 22640 3.56443e+07 0 0.150275 0.989633 0.81247 7.16488e+07 0.00379285 1.56478e+07 6.89624e+06 1.58738e+07 202 1.58714e+07 8.35567e+06 0.00324548 1.58363e+07 49.9447 0.0270041 0.992515 0 50.3585 GTEX-17JCI-1526-SM-7IGOQ 2 C1 2 pieces; extensive pulmonary edema & hemorrhage; focal collection of bronchial cells in air spaces (delineated) 5.8 Lung Lung 0008952 596 1397 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993884 141681 0.970201 0.993929 0.700654 23020 1 76 0.00218831 117 0 5.78988e+07 0.0295727 316374 5.82524e+07 2.85503e+06 23049 2.88345e+07 0 0.269547 0.993929 0.6964 5.78988e+07 0.00262364 1.27613e+07 6.38498e+06 1.28547e+07 131 1.28628e+07 7.15623e+06 0.00240597 1.27597e+07 49.7988 0.00543109 0.993974 0 50.1825 GTEX-17JCI-1626-SM-7EPGZ 1 C1 2 pieces; 5% fibrovascular content 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 598 1396 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989994 410740 0.974758 0.992337 0.772623 24321 1 76 0.00316265 133 0 8.78243e+07 0.0249071 193030 8.85024e+07 1.17838e+07 24364 4.36893e+07 0 0.202136 0.992337 0.766702 8.78243e+07 0.0116723 1.9399e+07 9.18109e+06 1.95019e+07 147 1.95799e+07 1.57141e+07 0.00740742 1.95188e+07 49.9219 0.00218107 0.994681 0 50.1324 GTEX-17JCI-2226-SM-7LTA1 3 C1 6 pieces; mucosa autolyzed, muscle intact but partially autolyzed (2) 5.8 Stomach Stomach 0000945 614 1383 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.9907 228477 0.974346 0.992256 0.812525 23560 1 76 0.00257275 301 0 8.94556e+07 0.0254449 2.16801e+06 9.01537e+07 9.07684e+06 23590 4.45286e+07 0 0.161821 0.992256 0.806233 8.94556e+07 0.0034949 1.99149e+07 3.33503e+07 1.99034e+07 274 1.99618e+07 1.33186e+07 0.0030331 1.99725e+07 50.0133 0.024048 0.993813 0 49.9855 GTEX-17JCI-2326-SM-7IGPC 1 C1 2 pieces: 1 has corpora albicantia occupying 25% space; other has fibrovascular core occupying 30% 6 Ovary Ovary 0000992 617 1381 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993937 328973 0.954728 0.993854 0.649494 23059 1 76 0.00218418 130 0 7.00506e+07 0.0450873 221178 7.04838e+07 4.05402e+06 23099 3.48813e+07 0 0.305234 0.993854 0.645502 7.00506e+07 0.00244274 1.52226e+07 1.36367e+07 1.53566e+07 145 1.53864e+07 8.66912e+06 0.00231347 1.52003e+07 49.6957 0.003138 0.993771 0 50.219 GTEX-17JCI-2526-SM-7DHLB 1 C1 6 pieces; partly sloughed atrophic epithelium 8.4 Vagina Vagina 0000996 619 1380 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.98817 142888 0.965949 0.989318 0.665188 25186 1 76 0.00391114 137 0 7.61753e+07 0.0337799 247170 7.69978e+07 6.27754e+06 25234 3.78633e+07 0 0.300761 0.989318 0.658083 7.61753e+07 0.00576192 1.68193e+07 7.46523e+06 1.69052e+07 145 1.69564e+07 1.00739e+07 0.00483545 1.68528e+07 49.8468 0.00321009 0.990466 0 50.1274 GTEX-17JCI-2626-SM-7EWE6 3 C1 6 pieces; mucosa autolyzed; muscularis intact [1] 6.4 Colon Colon - Transverse 0001157 621 1378 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990883 125348 0.972151 0.992747 0.793246 22770 1 76 0.00254758 126 0 5.84238e+07 0.0267807 409483 5.88507e+07 5.14562e+06 22785 2.90562e+07 0 0.178906 0.992747 0.787492 5.84238e+07 0.00373622 1.26346e+07 5.9485e+06 1.27274e+07 136 1.27403e+07 9.56005e+06 0.00314079 1.27238e+07 49.9677 0.006958 0.994611 0 50.183 GTEX-17JCI-2826-SM-7IGNA 1 C1 6 pieces; foci of fibrovascular stroma occupy up to 10% 6.2 Colon Colon - Sigmoid 0001159 626 1375 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994059 403920 0.970551 0.995098 0.81629 24043 1 76 0.00193621 376 0 1.23469e+08 0.0292223 1.28867e+06 1.24077e+08 7.49453e+06 24070 6.1518e+07 0 0.154261 0.995098 0.812288 1.23469e+08 0.00307975 2.64582e+07 1.12816e+07 2.67193e+07 372 2.66491e+07 1.84667e+07 0.00250738 2.66595e+07 50.0097 0.0103861 0.996137 0 50.2455 GTEX-17JCI-2926-SM-7DUFF 1 C1 6 pieces; well trimmed; 10 & 20% dermal fat in 2 pieces 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 628 1373 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991376 252509 0.965895 0.992228 0.7224 25862 1 76 0.00286839 166 0 8.1496e+07 0.0339004 375015 8.21344e+07 7.38908e+06 25903 4.05602e+07 0 0.243495 0.992228 0.716786 8.1496e+07 0.0044072 1.78935e+07 8.68134e+06 1.79837e+07 175 1.80306e+07 1.16738e+07 0.00363714 1.79155e+07 49.8399 0.00456587 0.993079 0 50.1257 GTEX-17JCI-3026-SM-7EWDR 2 C1 4 pieces 6.5 Brain Brain - Cerebellum 0002037 651 1350 BP-52710 RNA Extraction from Paxgene-derived Lysate Plate Based 05/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99038 497917 0.932767 0.992433 0.721326 22838 1 76 0.00254802 122 0 6.13952e+07 0.0668742 1.28076e+06 6.18633e+07 5.4141e+06 22862 3.05466e+07 0 0.211441 0.992433 0.715867 6.13952e+07 0.00364667 1.30076e+07 2.31698e+07 1.32283e+07 144 1.3239e+07 6.51881e+06 0.00309621 1.31142e+07 49.7632 0.0207031 0.994486 0 50.4206 GTEX-17JCI-3126-SM-7LTA2 2 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 654 1348 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991025 624019 0.964642 0.993264 0.833308 24881 1 76 0.00260351 270 0 1.03642e+08 0.0349908 4.08687e+06 1.04344e+08 1.09577e+07 24904 5.15305e+07 0 0.131334 0.993264 0.827695 1.03642e+08 0.00379002 2.27562e+07 1.82734e+07 2.27931e+07 309 2.2938e+07 1.22667e+07 0.00319543 2.28045e+07 49.8541 0.0391671 0.995503 0 50.0406 GTEX-17KNJ-0003-SM-6RBJX C1 Blood Whole Blood 0013756 -55 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17KNJ-0003-SM-6UH1P C1 Blood Whole Blood 0013756 -55 BP-51138 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/04/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17KNJ-0005-SM-7PBYB C1 8.8 Blood Whole Blood 0013756 -55 BP-51144 RNA isolation_PAXgene Blood RNA (Manual) 04/04/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986737 417137 0.961924 0.99069 0.820109 18975 1 76 0.00321397 120 0 7.1356e+07 0.0373597 266211 7.20266e+07 9.64615e+06 18982 3.54515e+07 0 0.141815 0.99069 0.812474 7.1356e+07 0.00559986 1.57659e+07 4.9741e+07 1.59294e+07 140 1.60003e+07 1.48331e+07 0.00440216 1.59771e+07 49.9638 0.00369601 0.994643 0 50.2578 GTEX-17KNJ-0008-SM-EAZBI C1 7.2 Skin Cells - Cultured fibroblasts EFO_0002009 273 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992849 465379 0.975243 0.993697 0.831412 21708 1 76 0.00178634 304 0 1.07395e+08 0.0243847 311804 1.08076e+08 7.69119e+06 21738 5.35369e+07 0 0.143831 0.993697 0.826172 1.07395e+08 0.00260958 2.38817e+07 1.4e+07 2.39984e+07 280 2.39851e+07 2.60207e+07 0.00219761 2.39839e+07 49.9987 0.00288505 0.994545 0 50.1219 GTEX-17KNJ-0326-SM-7KFS5 1 B1 2 pieces, cortex, ~10% adherent fat/vascular elements, delineated 7.8 Adrenal Gland Adrenal Gland 0002369 175 1236 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993093 262841 0.975948 0.994548 0.832075 23836 1 76 0.00308037 269 0 8.6906e+07 0.0237813 1.52136e+06 8.73824e+07 6.70048e+06 23860 4.32713e+07 0 0.143873 0.994548 0.827539 8.6906e+07 0.00293467 1.91669e+07 8.14114e+06 1.95201e+07 265 1.94744e+07 1.28624e+07 0.00300763 1.93226e+07 49.8043 0.0174104 0.996003 0 50.4565 GTEX-17KNJ-0426-SM-718AK 1 B1 2 pieces, ~15-20% fascia/vascular elements, rep delineated 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 185 1226 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965321 293527 0.974891 0.979153 0.821906 24646 1 76 0.00265103 373 0 1.11359e+08 0.0248558 2.02782e+06 1.1373e+08 5.48905e+06 24683 5.47139e+07 0 0.152985 0.979153 0.804772 1.11359e+08 0.00573449 2.43704e+07 1.32549e+07 2.44499e+07 353 2.51749e+07 1.45076e+07 0.00417098 2.50894e+07 49.9149 0.0178301 0.992985 0 50.0814 GTEX-17KNJ-0526-SM-7LTA8 1 B1 6 pieces, minimal atherosis, adherent fascia/fat up to ~1mm 6 Blood Vessel Artery - Aorta 0001496 213 1198 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 EXCLUDE 0.987947 258615 0.972028 0.99098 0.829621 21671 1 76 0.00262104 139 0 6.60991e+07 0.0275552 349720 6.67008e+07 7.35879e+06 21685 3.28145e+07 0 0.142407 0.99098 0.822138 6.60991e+07 0.00404203 1.42018e+07 8.11176e+06 1.4298e+07 147 1.44183e+07 1.25677e+07 0.00332936 1.42704e+07 49.7422 0.00524312 0.994013 0 50.1688 GTEX-17KNJ-0526-SM-7PC3Y 1 B1 6 pieces, minimal atherosis, adherent fascia/fat up to ~1mm 6 Blood Vessel Artery - Aorta 0001496 213 1198 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989896 329498 0.972239 0.991772 0.825945 21913 1 76 0.00343115 155 0 7.5453e+07 0.0273827 407620 7.6079e+07 1.15011e+07 21938 3.74998e+07 0 0.146294 0.991772 0.819149 7.5453e+07 0.00418409 1.62284e+07 8.77878e+06 1.64198e+07 169 1.64619e+07 1.35557e+07 0.00380691 1.63244e+07 49.7903 0.00535785 0.993648 0 50.2932 GTEX-17KNJ-0626-SM-7LT9L 1 B1 2 pieces, adherent fat is ~20% total specimen, delineated 7.7 Heart Heart - Atrial Appendage 0006631 216 1195 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.99229 272831 0.977657 0.994309 0.827749 23103 1 76 0.00270394 270 0 1.00237e+08 0.0220498 2.03358e+06 1.0081e+08 9.99032e+06 23126 4.99025e+07 0 0.149908 0.994309 0.823038 1.00237e+08 0.00346753 2.18568e+07 1.64554e+07 2.19882e+07 260 2.20345e+07 1.57939e+07 0.00308496 2.19779e+07 49.9357 0.0201724 0.996327 0 50.1498 GTEX-17KNJ-0826-SM-793A4 1 B1 2 pieces, minimal mild ischemic changes/interstitial fibrosis 8.9 Heart Heart - Left Ventricle 0006566 223 1188 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778,LCSET-6917 03/14/2015 TruSeq.v1 RNASEQ 0.994095 492419 0.982557 0.995498 0.851679 23197 1 76 0.00243065 377 0 1.64287e+08 0.017096 3.4008e+06 1.6503e+08 1.87466e+07 23227 8.18302e+07 0 0.130878 0.995498 0.847845 1.64287e+08 0.00354042 3.61623e+07 2.49956e+07 3.64653e+07 349 3.64773e+07 2.94901e+07 0.00298475 3.63323e+07 49.9004 0.0206072 0.996901 0 50.2086 GTEX-17KNJ-0926-SM-7IGP2 1 B1 2 pieces diffuse chronic congestion/edema, moderate-marked 5.9 Lung Lung 0008952 228 1183 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993547 240729 0.967889 0.993962 0.777689 25577 1 76 0.00226843 269 0 1.01523e+08 0.0316224 759590 1.0214e+08 4.43726e+06 25611 5.05725e+07 0 0.1902 0.993962 0.772993 1.01523e+08 0.00268121 2.22812e+07 1.09841e+07 2.26551e+07 328 2.25866e+07 1.43677e+07 0.00247473 2.23796e+07 49.7698 0.00743677 0.994377 0 50.416 GTEX-17KNJ-1026-SM-79ONK 1 B1 2 pieces, no abnormalities, ~2mm nubbin of fat on one edge, delineated 6.7 Thyroid Thyroid 0002046 231 1180 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992325 193593 0.965853 0.992496 0.75188 23705 1 76 0.00317658 113 0 5.89062e+07 0.0338571 251336 5.93516e+07 3.56069e+06 23735 2.93379e+07 0 0.213973 0.992496 0.746238 5.89062e+07 0.0044405 1.29148e+07 6.03394e+06 1.29765e+07 125 1.30005e+07 9.03922e+06 0.00380843 1.28983e+07 49.8027 0.0042347 0.992668 0 50.1191 GTEX-17KNJ-1126-SM-7KFT6 1 B1 2 pieces, spermatogenesis appears reduced 6.1 Testis Testis 0000473 234 1177 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988014 452152 0.929855 0.991117 0.743411 33980 1 76 0.00284671 285 0 1.08074e+08 0.0698033 1.0176e+06 1.09043e+08 8.06188e+06 34048 5.37241e+07 0 0.186444 0.991117 0.736807 1.08074e+08 0.00332163 2.22182e+07 1.58754e+07 2.24916e+07 272 2.25999e+07 1.80475e+07 0.00308343 2.2409e+07 49.7879 0.00933215 0.994219 0 50.3058 GTEX-17KNJ-1226-SM-7LT9M 1 B1 6 pieces, confirmed target muscularis 7.5 Esophagus Esophagus - Muscularis 0004648 242 1169 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990655 345626 0.97562 0.993217 0.828867 22775 1 76 0.00267673 279 0 9.42682e+07 0.0241141 773763 9.4912e+07 1.04421e+07 22797 4.68827e+07 0 0.146753 0.993217 0.823245 9.42682e+07 0.00357707 2.02074e+07 8.61561e+06 2.03856e+07 258 2.04918e+07 1.653e+07 0.00312574 2.03164e+07 49.7851 0.00815243 0.995779 0 50.2195 GTEX-17KNJ-1326-SM-7KFTG 1 B1 6 pieces, squamous mucosa is ~0.2-0.3mm, ~20-50% thickness. Submucosal mucus glands present, rep. delineated 7.4 Esophagus Esophagus - Mucosa 0006920 246 1165 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992507 266593 0.974598 0.993872 0.81242 24508 1 76 0.00285351 210 0 8.92005e+07 0.0247857 480943 8.97504e+07 5.85228e+06 24536 4.4406e+07 0 0.162178 0.993872 0.807442 8.92005e+07 0.00308864 1.97613e+07 9.60274e+06 1.99921e+07 238 1.99897e+07 1.62297e+07 0.00297091 1.98815e+07 49.8643 0.00535867 0.995237 0 50.2904 GTEX-17KNJ-1526-SM-7LTA9 1 B1 6 pieces, superficial mucosa approached score '2', up to ~0.7mm, ~15% thickness. Chronic gastritis, microglandular cystic change noted 7.3 Stomach Stomach 0000945 253 1158 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988801 462694 0.97532 0.992194 0.818358 24445 1 76 0.00258278 286 0 1.12592e+08 0.0243394 728980 1.13478e+08 1.17875e+07 24479 5.59257e+07 0 0.156962 0.992194 0.81197 1.12592e+08 0.00385639 2.45697e+07 1.03407e+07 2.47095e+07 296 2.49188e+07 2.05194e+07 0.00321741 2.47125e+07 49.7922 0.00642398 0.995587 0 50.1418 GTEX-17KNJ-1626-SM-718AL 2 B1 6 pieces, few lymphoid glandular aggregates, delineated 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 256 1155 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967907 374879 0.974357 0.981108 0.81779 25322 1 76 0.00241127 379 0 1.17432e+08 0.025349 765900 1.19693e+08 5.35438e+06 25362 5.77576e+07 0 0.156567 0.981108 0.80234 1.17432e+08 0.00532968 2.54323e+07 1.0535e+07 2.54831e+07 338 2.6252e+07 2.01262e+07 0.00385084 2.61585e+07 49.9108 0.00639886 0.994309 0 50.0499 GTEX-17KNJ-1726-SM-7LG6A 1 B1 6 pieces, target mucosa well-preserved, ).35mm, ~10% total thickness 8.1 Colon Colon - Transverse 0001157 258 1153 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978882 574846 0.975917 0.985656 0.825145 25087 1 76 0.00356913 290 0 1.11675e+08 0.0234941 1.2725e+06 1.133e+08 1.65774e+07 25121 5.52458e+07 0 0.150772 0.985656 0.813309 1.11675e+08 0.00566692 2.43592e+07 1.52126e+07 2.44777e+07 280 2.48389e+07 1.9816e+07 0.00461081 2.46914e+07 49.8511 0.0112312 0.99243 0 50.1213 GTEX-17KNJ-1826-SM-7LT9N 1 B1 6 pieces, confirmed target muscularis, ~5-10% 'contaminant mucosa, rep. delineated 7.5 Colon Colon - Sigmoid 0001159 261 1150 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991186 356979 0.975086 0.993495 0.82684 23635 1 76 0.00255208 290 0 9.95348e+07 0.0245514 618767 1.00186e+08 1.02294e+07 23660 4.95139e+07 0 0.148246 0.993495 0.821462 9.95348e+07 0.00360289 2.15565e+07 9.33709e+06 2.16539e+07 258 2.17992e+07 1.8938e+07 0.00307626 2.162e+07 49.7936 0.00617616 0.995805 0 50.1127 GTEX-17KNJ-1926-SM-7KFRV 1 B1 2 pieces, Islets infrequent but fairly well preserved; rep encircled. Few foci are approaching more moderate saponification 6.6 Pancreas Pancreas 0001150 263 1148 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992144 270950 0.981424 0.993433 0.858462 21513 1 76 0.00291784 109 0 7.69613e+07 0.0182178 216736 7.747e+07 5.25915e+06 21527 3.83174e+07 0 0.122962 0.993433 0.852825 7.69613e+07 0.00279402 1.76329e+07 2.57928e+07 1.79438e+07 117 1.79006e+07 2.36156e+07 0.00285601 1.77786e+07 49.8291 0.00279768 0.994723 0 50.437 GTEX-17KNJ-2026-SM-7LG53 1 B1 2 pieces, gynecomastoid stromal/duct hyerplasia, rep. ductal elements delineated. 7 Breast Breast - Mammary Tissue 0008367 266 1145 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.982253 362611 0.970528 0.988112 0.785273 25074 1 76 0.00351615 215 0 9.07452e+07 0.0291707 540886 9.1837e+07 1.3308e+07 25112 4.49492e+07 0 0.185255 0.988112 0.775938 9.07452e+07 0.00545338 1.98495e+07 1.01251e+07 2.00248e+07 229 2.02741e+07 1.5999e+07 0.00447902 2.01002e+07 49.7846 0.00588963 0.993971 0 50.2199 GTEX-17KNJ-2126-SM-718AM 0 B1 6 pieces, squamous epithelium is ~50 microns; minimal adherent dermal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 268 1143 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965708 271391 0.968164 0.979849 0.783761 24724 1 76 0.00247455 189 0 8.80029e+07 0.0316418 540100 8.98128e+07 4.28002e+06 24757 4.32282e+07 0 0.184403 0.979849 0.767968 8.80029e+07 0.00555622 1.90755e+07 9.91947e+06 1.90444e+07 198 1.96635e+07 1.46437e+07 0.00399315 1.96934e+07 50.038 0.00601362 0.99399 0 49.9592 GTEX-17KNJ-2226-SM-731CG 0 B1 2 pieces, ~10% fascia/vascular elements 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 272 1139 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.989193 107926 0.979326 0.991185 0.857432 21448 1 76 0.00255343 135 0 5.35412e+07 0.020337 294895 5.40173e+07 2.65681e+06 21458 2.66271e+07 0 0.121894 0.991185 0.849874 5.35412e+07 0.00306557 1.16659e+07 5.59721e+06 1.17834e+07 128 1.17792e+07 1.23943e+07 0.00280898 1.17761e+07 49.9933 0.00545927 0.993178 0 50.2506 GTEX-17KNJ-2226-SM-7LG6W 0 B1 2 pieces, ~10% fascia/vascular elements 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 272 1139 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 EXCLUDE 0.977883 471474 0.980521 0.983892 0.869243 23381 1 76 0.00335671 221 0 9.1388e+07 0.0190861 538135 9.28842e+07 1.34298e+07 23398 4.51996e+07 0 0.111279 0.983892 0.855241 9.1388e+07 0.00558989 1.98206e+07 1.17799e+07 1.9934e+07 206 2.02459e+07 2.28824e+07 0.00446648 2.00307e+07 49.7328 0.00579361 0.989902 0 50.1427 GTEX-17KNJ-2226-SM-DKPOU 0 B1 2 pieces, ~10% fascia/vascular elements 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 272 1139 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991343 276547 0.977398 0.993263 0.855631 23259 1 76 0.00272273 221 0 9.28552e+07 0.0222582 503205 9.3485e+07 9.4878e+06 23283 4.62401e+07 0 0.121767 0.993263 0.849867 9.28552e+07 0.00288117 2.01713e+07 1.23613e+07 2.03928e+07 220 2.03578e+07 2.15602e+07 0.0028018 2.0386e+07 50.0346 0.00538273 0.995183 0 50.2729 GTEX-17KNJ-2326-SM-7DHLQ 0 B1 6 pieces, squamous epithelium is ~30-40 microns; minimal adherent dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 279 1132 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989048 153845 0.971948 0.989997 0.774004 23666 1 76 0.00365762 187 0 8.06873e+07 0.0278051 214092 8.15026e+07 6.81593e+06 23701 4.01168e+07 0 0.197945 0.989997 0.766261 8.06873e+07 0.0056028 1.76122e+07 8.0314e+06 1.76742e+07 174 1.77296e+07 1.33752e+07 0.00462927 1.7631e+07 49.8607 0.00262681 0.990947 0 50.0879 GTEX-17KNJ-2426-SM-7DHLR 0 B1 2 pieces, ~5-10% interstitial fat or tendon insertion site (delineated). 7.9 Muscle Muscle - Skeletal 0011907 283 1128 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99158 170594 0.979872 0.992861 0.849786 20440 1 76 0.00352856 166 0 7.40232e+07 0.019937 1.03667e+06 7.45554e+07 5.86417e+06 20458 3.68686e+07 0 0.130085 0.992861 0.84372 7.40232e+07 0.00524175 1.60557e+07 8.85962e+06 1.6343e+07 180 1.62962e+07 1.29719e+07 0.00438405 1.6178e+07 49.818 0.0139047 0.994143 0 50.4434 GTEX-17KNJ-2526-SM-7DUFR 0 B1 2 pieces, small muscular artery, minimal adherent fat/fascia; no atherosis 7.4 Blood Vessel Artery - Tibial 0007610 289 1122 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991843 186265 0.971453 0.99213 0.814366 22426 1 76 0.0027428 214 0 9.04804e+07 0.0281522 556719 9.11982e+07 8.1261e+06 22455 4.503e+07 0 0.157087 0.99213 0.807957 9.04804e+07 0.00406357 1.94768e+07 8.51366e+06 1.95703e+07 228 1.95926e+07 1.64847e+07 0.003403 1.94879e+07 49.866 0.0061045 0.992416 0 50.1197 GTEX-17KNJ-2726-SM-7KFRE 1 B1 2 pieces, ~75% glandular parenchyma (delineated); rest is stroma/skeletal muscle 8.1 Salivary Gland Minor Salivary Gland 0006330 291 1120 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988858 1.02192e+06 0.952763 0.990867 0.811504 24192 1 76 0.00303306 209 0 8.903e+07 0.0460939 374936 8.98506e+07 6.25125e+06 24212 4.4242e+07 0 0.141259 0.990867 0.804092 8.903e+07 0.00336582 1.93248e+07 3.27106e+07 1.96046e+07 216 1.96808e+07 1.63131e+07 0.0031991 1.94306e+07 49.6801 0.00417288 0.992875 0 50.3595 GTEX-17KNJ-5004-SM-AN44T B1 Heart Heart - Left Ventricle 0006566 284 ChIP-Seq GTEX-17KNJ-5019-SM-AN44V B1 Muscle Muscle - Skeletal 0011907 284 ChIP-Seq GTEX-17MF6-0002-SM-6RBK9 C1 Blood Whole Blood 0013756 1214 BP-51298 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/08/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17MF6-0002-SM-6UH21 C1 Blood Whole Blood 0013756 1214 BP-51298 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/08/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17MF6-0006-SM-7MXT6 C1 6.5 Blood Whole Blood 0013756 1214 BP-51278 RNA isolation_PAXgene Blood RNA (Manual) 04/08/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 EXCLUDE 0.97623 718093 0.965797 0.982933 0.798631 18175 1 76 0.00322719 179 0 8.40961e+07 0.0333938 570972 8.55563e+07 1.04556e+07 18186 4.16494e+07 0 0.167166 0.982933 0.785001 8.40961e+07 0.00477514 1.8144e+07 3.37012e+07 1.83943e+07 180 1.84968e+07 1.56047e+07 0.00399589 1.85902e+07 50.126 0.00667364 0.989636 0 50.3425 GTEX-17MF6-0008-SM-EAZBV C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 1315 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993343 544930 0.978124 0.99432 0.857375 20871 1 76 0.00165744 290 0 1.06471e+08 0.0215313 303203 1.07079e+08 8.04095e+06 20890 5.30777e+07 0 0.120749 0.99432 0.852505 1.06471e+08 0.00260425 2.38751e+07 1.54464e+07 2.4049e+07 275 2.40676e+07 2.86603e+07 0.00213038 2.39604e+07 49.8885 0.00283158 0.995297 0 50.1814 GTEX-17MF6-0011-R1a-SM-72D6O C1, A1 5.8 Brain Brain - Hippocampus 0001954 1228 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992962 245496 0.968988 0.994442 0.850664 21012 1 76 0.0023085 268 0 7.03252e+07 0.0308366 5.57967e+06 7.07182e+07 3.80709e+06 21026 3.50311e+07 0 0.118324 0.994442 0.845936 7.03252e+07 0.00301143 1.54362e+07 1.5916e+07 1.57949e+07 283 1.56307e+07 5.10045e+06 0.00265944 1.56849e+07 50.0866 0.0789 0.995922 0 50.5742 GTEX-17MF6-0011-R5a-SM-731BA C1, A1 6.5 Brain Brain - Caudate (basal ganglia) 0001873 1228 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.99119 361385 0.966351 0.99305 0.854136 20927 1 76 0.00250013 262 0 6.95149e+07 0.0335088 6.15795e+06 7.00014e+07 3.31378e+06 20937 3.4596e+07 0 0.112214 0.99305 0.8482 6.95149e+07 0.00288829 1.51102e+07 1.88416e+07 1.56651e+07 276 1.55057e+07 4.45072e+06 0.00269385 1.53763e+07 49.7905 0.0879689 0.994909 0 50.9015 GTEX-17MF6-0011-R6b-SM-7LG6G C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1228 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981964 841685 0.95579 0.986777 0.811917 24467 1 76 0.00314108 271 0 9.99745e+07 0.0439723 6.8447e+06 1.01314e+08 1.31866e+07 24484 4.9553e+07 0 0.143874 0.986777 0.801181 9.99745e+07 0.00510339 2.15515e+07 3.99458e+07 2.12299e+07 304 2.1443e+07 1.03576e+07 0.00411745 2.17516e+07 50.3572 0.0675592 0.991591 0 49.6241 GTEX-17MF6-0011-R7b-SM-7LG6J C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 1228 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.974507 708791 0.963252 0.981245 0.807872 21424 1 76 0.00318286 274 0 9.87545e+07 0.0366343 9.62948e+06 1.00642e+08 1.5071e+07 21436 4.88605e+07 0 0.15538 0.981245 0.79272 9.87545e+07 0.00516594 2.08188e+07 6.5932e+07 2.08377e+07 317 2.07689e+07 6.70174e+06 0.00416759 2.14067e+07 50.7561 0.0956805 0.987983 0 50.0227 GTEX-17MF6-0126-SM-7LG4F 0 C1 6 pieces; essentially well trimmed; one piece ~5% external fat; epidermis ~41 um thick 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1315 1279 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976945 317927 0.966902 0.984564 0.741299 25738 1 76 0.00368539 226 0 9.83951e+07 0.0328683 365288 9.99377e+07 1.59042e+07 25784 4.86445e+07 0 0.225603 0.984564 0.729856 9.83951e+07 0.00552939 2.13127e+07 1.39983e+07 2.16565e+07 247 2.1975e+07 1.60019e+07 0.00460026 2.17099e+07 49.6966 0.00365516 0.992183 0 50.4 GTEX-17MF6-0226-SM-7LG4G 1 C1 2 pieces; one contains ~50% dense connective tissue and other ~10% fibrovascular component (outlined) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 1317 1278 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98023 232594 0.972689 0.987339 0.800391 23980 1 76 0.00342067 283 0 9.59185e+07 0.0270192 612281 9.71484e+07 1.37859e+07 24012 4.7459e+07 0 0.172298 0.987339 0.790257 9.59185e+07 0.00561827 2.07648e+07 1.21916e+07 2.0992e+07 262 2.12473e+07 1.73438e+07 0.00451156 2.11532e+07 49.889 0.00630253 0.994448 0 50.2721 GTEX-17MF6-0326-SM-7EPH5 1 C1 2 pieces; mature adipose tissue and ~20% fibrovascular and neural component; no ductal elements present 6.7 Breast Breast - Mammary Tissue 0008367 1319 1276 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989732 143533 0.970908 0.991995 0.777081 23168 1 76 0.00304554 132 0 8.51536e+07 0.028832 634398 8.58408e+07 1.12951e+07 23204 4.24056e+07 0 0.193827 0.991995 0.770861 8.51536e+07 0.0115696 1.85152e+07 1.05008e+07 1.86953e+07 150 1.87249e+07 1.3875e+07 0.00729783 1.86654e+07 49.9204 0.0073904 0.994258 0 50.2419 GTEX-17MF6-0426-SM-79ONB 1 C1 2 pieces; surrounded by ~0.6mm of perineural and adipose tissue (arrow) 6.5 Nerve Nerve - Tibial 0001323 1324 1272 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991599 85479 0.958453 0.991266 0.721431 23344 1 76 0.003166 129 0 5.51988e+07 0.0413191 195871 5.56852e+07 3.52005e+06 23377 2.74701e+07 0 0.237022 0.991266 0.71513 5.51988e+07 0.00439319 1.20201e+07 5.54097e+06 1.20493e+07 121 1.20487e+07 8.03397e+06 0.0037798 1.20054e+07 49.91 0.00351747 0.990933 0 50.0608 GTEX-17MF6-0526-SM-7LG4H 1 C1 2 pieces; medial calcifications (outlined) 6.2 Blood Vessel Artery - Tibial 0007610 1325 1271 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980205 275326 0.970942 0.986135 0.829578 22513 1 76 0.00348615 216 0 9.20545e+07 0.0286867 312135 9.33488e+07 1.44157e+07 22536 4.55831e+07 0 0.141364 0.986135 0.818076 9.20545e+07 0.00519296 1.94183e+07 1.10233e+07 1.97564e+07 231 1.99279e+07 1.86624e+07 0.00433442 1.97578e+07 49.7857 0.00334375 0.992065 0 50.4316 GTEX-17MF6-0626-SM-7LT8D 1 C1 2 pieces; mild accentuation of interstitial connective tissue; 6.2 Thyroid Thyroid 0002046 1327 1270 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988118 209707 0.963389 0.991053 0.727751 26017 1 76 0.00280389 277 0 1.06717e+08 0.0363164 379827 1.0768e+08 1.1245e+07 26078 5.30563e+07 0 0.235638 0.991053 0.72124 1.06717e+08 0.00389242 2.31306e+07 1.20221e+07 2.33109e+07 267 2.34389e+07 1.60762e+07 0.00334654 2.32974e+07 49.8487 0.00352736 0.993988 0 50.1941 GTEX-17MF6-0726-SM-7LT8E 1 C1 2 pieces; foci of hemorrhage &/or edema outlined; interstitial fibrosis 6.4 Heart Heart - Left Ventricle 0006566 1333 1264 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990603 178052 0.976675 0.9932 0.821855 22411 1 76 0.00240659 268 0 1.04315e+08 0.0232093 4.50588e+06 1.05029e+08 1.14318e+07 22437 5.19186e+07 0 0.15482 0.9932 0.816266 1.04315e+08 0.00328301 2.28855e+07 2.3422e+07 2.29741e+07 295 2.29272e+07 9.84021e+06 0.00284365 2.31481e+07 50.2396 0.0429013 0.995797 0 50.0966 GTEX-17MF6-0826-SM-7LT8F 1 C1 2 pieces; moderate congestion 6 Lung Lung 0008952 1338 1260 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988382 257182 0.968504 0.991322 0.707419 25418 1 76 0.0029484 277 0 1.17195e+08 0.0312343 871058 1.18221e+08 1.22624e+07 25471 5.82349e+07 0 0.261085 0.991322 0.70128 1.17195e+08 0.00411412 2.57101e+07 1.30079e+07 2.58822e+07 301 2.59931e+07 1.48407e+07 0.00352953 2.5921e+07 49.9306 0.00736807 0.994263 0 50.1668 GTEX-17MF6-0926-SM-7LTAL 1 C1 2 pieces; 30% fibrous content 7 Heart Heart - Atrial Appendage 0006631 1339 1259 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989786 411300 0.973559 0.992829 0.783972 23347 1 76 0.00252645 270 0 1.05598e+08 0.0262197 2.73488e+06 1.06361e+08 1.17634e+07 23380 5.24775e+07 0 0.189587 0.992829 0.778351 1.05598e+08 0.00373321 2.22952e+07 1.63389e+07 2.22809e+07 296 2.2485e+07 1.51581e+07 0.00312798 2.23632e+07 49.8642 0.0257131 0.995873 0 49.984 GTEX-17MF6-1026-SM-7EWE1 1 C1 6 pieces; atherosis layer over 0.6mm thick with small foci of calcification (outlined) 6.4 Blood Vessel Artery - Aorta 0001496 1341 1258 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989092 144155 0.97375 0.990968 0.774576 22248 1 76 0.00252775 123 0 6.24196e+07 0.0258893 174285 6.29885e+07 5.47565e+06 22271 3.10347e+07 0 0.199174 0.990968 0.767579 6.24196e+07 0.00369962 1.35201e+07 5.13843e+06 1.357e+07 138 1.35922e+07 1.1132e+07 0.00311258 1.36093e+07 50.0314 0.00276693 0.992844 0 50.0921 GTEX-17MF6-1126-SM-7DUFS 1 C1 2 pieces; moderate central congestion 7.3 Liver Liver 0001114 1343 1256 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992061 325922 0.96428 0.992808 0.803591 22400 1 76 0.00276975 202 0 8.95543e+07 0.0347696 1.04562e+06 9.02031e+07 7.98541e+06 22425 4.4596e+07 0 0.16069 0.992808 0.797811 8.95543e+07 0.00388903 1.91538e+07 1.62399e+07 1.936e+07 244 1.94081e+07 1.62113e+07 0.00332897 1.91674e+07 49.688 0.0115919 0.993555 0 50.2676 GTEX-17MF6-1326-SM-79ONE 1 C1 2 pieces; lobulated mature adipose tissue; minimal fibrous content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1347 1253 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992194 113870 0.965873 0.992122 0.726019 23415 1 76 0.00321056 124 0 6.21021e+07 0.033863 388945 6.25953e+07 3.86150e+06 23452 3.09117e+07 0 0.239854 0.992122 0.720299 6.21021e+07 0.00443835 1.35862e+07 6.71017e+06 1.36613e+07 137 1.3652e+07 8.73057e+06 0.0038245 1.35948e+07 49.8951 0.00621365 0.99205 0 50.1377 GTEX-17MF6-1426-SM-7IGOX 2 C1 2 pieces; moderate interstitial fibrosis; reduced number of islets; sloughed ductal epithelium and septal fat necrosis 5.8 Pancreas Pancreas 0001150 1349 1252 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995545 181590 0.969839 0.995756 0.860476 20414 1 76 0.00231882 102 0 6.83443e+07 0.0298483 194351 6.86356e+07 2.44571e+06 20426 3.40735e+07 0 0.109362 0.995756 0.856825 6.83443e+07 0.0026035 1.56369e+07 2.08862e+07 1.59108e+07 108 1.5897e+07 2.12518e+07 0.00246113 1.56676e+07 49.6366 0.00283164 0.995967 0 50.4341 GTEX-17MF6-1526-SM-7MGW8 1 C1 6 pieces; congestion and accentuation of interstitial connective tissue 5.6 Esophagus Esophagus - Muscularis 0004648 1350 1251 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.986892 110038 0.966244 0.989802 0.803688 22558 1 76 0.00270419 133 0 6.38402e+07 0.0335995 1.29827e+06 6.44979e+07 5.2724e+06 22580 3.17623e+07 0 0.162556 0.989802 0.795492 6.38402e+07 0.00374932 1.38706e+07 7.10206e+06 1.40527e+07 165 1.40505e+07 8.19736e+06 0.00322522 1.40437e+07 49.9878 0.0201289 0.992712 0 50.326 GTEX-17MF6-1726-SM-7LTA3 1 C1 6 pieces; edema 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 1353 1249 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.985813 322505 0.965639 0.98936 0.786515 24580 1 76 0.00270934 277 0 1.01478e+08 0.0341397 1.26440e+06 1.02569e+08 1.14998e+07 24616 5.03506e+07 0 0.179124 0.98936 0.778146 1.01478e+08 0.00430717 2.19456e+07 1.11067e+07 2.20941e+07 293 2.22806e+07 1.5722e+07 0.00350539 2.20933e+07 49.789 0.0123273 0.992907 0 50.1686 GTEX-17MF6-2026-SM-7LG5I 1 C1 2 pieces; congestion, focal hemorrhage & edema [arrows]; fascia or tendon on edges [labeled] 8 Muscle Muscle - Skeletal 0011907 1366 1244 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981266 451393 0.980291 0.987151 0.861298 21018 1 76 0.00317729 214 0 9.33065e+07 0.0194905 620438 9.45209e+07 1.4271e+07 21031 4.62342e+07 0 0.118993 0.987151 0.850231 9.33065e+07 0.00499784 1.99317e+07 1.16308e+07 2.01061e+07 254 2.03608e+07 2.0633e+07 0.00408214 2.01782e+07 49.7747 0.00656403 0.993037 0 50.2178 GTEX-17MF6-2126-SM-7KFS7 2 C1 6 pieces; poor mucosal preservation; muscle intact 7 Stomach Stomach 0000945 1368 1242 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.982291 213936 0.978114 0.985291 0.83507 23355 1 76 0.00269864 360 0 8.72807e+07 0.0214455 554662 8.85836e+07 6.75417e+06 23378 4.33491e+07 0 0.143044 0.985291 0.822787 8.72807e+07 0.00327746 1.98352e+07 9.17168e+07 2.0167e+07 268 2.02661e+07 2.22705e+07 0.00298717 2.00051e+07 49.6759 0.00626145 0.988291 0 50.4147 GTEX-17MF6-2426-SM-7LTAM 2 C1 6 pieces; severely autolyzed mucosa and preserved muscularis 6.6 Colon Colon - Transverse 0001157 1377 1235 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990502 286984 0.967014 0.992282 0.791391 25855 1 76 0.00283164 282 0 1.13894e+08 0.0318851 753343 1.1478e+08 1.09053e+07 25899 5.66168e+07 0 0.175623 0.992282 0.785283 1.13894e+08 0.00391716 2.46737e+07 1.39353e+07 2.47656e+07 289 2.48562e+07 1.84864e+07 0.00337343 2.47707e+07 49.9138 0.00656339 0.994062 0 50.093 GTEX-17MF6-2626-SM-79OKQ 1 C1 6 pieces; essentially well trimmed except one poice containing ~10% external fat (outlined) 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1382 1230 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.972589 275232 0.965584 0.977006 0.738135 23891 1 76 0.00523823 137 0 6.25164e+07 0.034222 256125 6.39877e+07 1.53476e+07 23915 3.10582e+07 0 0.227449 0.977006 0.721163 6.25164e+07 0.00675569 1.36128e+07 7.54582e+06 1.37028e+07 133 1.37876e+07 9.32238e+06 0.00599353 1.37906e+07 50.0055 0.00400272 0.981424 0 50.1647 GTEX-17MF6-2726-SM-7IGMZ 1 C1 2 pieces; spermatogenesis present; 6.1 Testis Testis 0000473 1384 1229 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992368 674378 0.922134 0.993399 0.726185 32727 1 76 0.0020497 173 0 8.19891e+07 0.0775362 948237 8.25339e+07 5.1697e+06 32790 4.08327e+07 0 0.195948 0.993399 0.721392 8.19891e+07 0.00280082 1.66191e+07 1.24763e+07 1.67952e+07 174 1.68115e+07 1.27908e+07 0.00242487 1.66764e+07 49.7983 0.0114891 0.994431 0 50.2635 GTEX-17MF6-2926-SM-7LTAW 1 C1 4 fragmenetd pieces; mild to moderate autolysis 6.2 Brain Brain - Cortex 0001870 1389 1225 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991022 501706 0.970365 0.99305 0.831291 23570 1 76 0.00235979 277 0 1.23487e+08 0.0294366 1.10623e+07 1.24351e+08 1.27566e+07 23596 6.14343e+07 0 0.139074 0.99305 0.825513 1.23487e+08 0.00324561 2.687e+07 4.34877e+07 2.70502e+07 328 2.69218e+07 9.53269e+06 0.0028018 2.7156e+07 50.2165 0.0889603 0.995079 0 50.1671 GTEX-17MFQ-0003-SM-6RBKC B1 Blood Whole Blood 0013756 -109 BP-51298 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/08/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-17MFQ-0003-SM-6UH24 B1 Blood Whole Blood 0013756 -109 BP-51298 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/08/2014 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-17MFQ-0006-SM-7PBXP B1 8.8 Blood Whole Blood 0013756 -109 BP-51278 RNA isolation_PAXgene Blood RNA (Manual) 04/08/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988284 731096 0.959021 0.9918 0.798239 20132 1 76 0.00322029 206 0 1.06523e+08 0.0404157 339553 1.07404e+08 1.50789e+07 20152 5.2951e+07 0 0.160782 0.9918 0.791694 1.06523e+08 0.0050965 2.3412e+07 6.06109e+07 2.35897e+07 253 2.37236e+07 2.21062e+07 0.00415507 2.36506e+07 49.923 0.00316145 0.995316 0 50.189 GTEX-17MFQ-0008-SM-EAZBK B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 367 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993268 547406 0.976529 0.994296 0.851294 20945 1 76 0.00169002 294 0 1.04628e+08 0.0231407 214338 1.05228e+08 8.17338e+06 20966 5.21537e+07 0 0.125235 0.994296 0.846438 1.04628e+08 0.00266562 2.34419e+07 1.57472e+07 2.35902e+07 274 2.36243e+07 2.77798e+07 0.00217732 2.35163e+07 49.8854 0.00203689 0.995324 0 50.1577 GTEX-17MFQ-0526-SM-7KFTX 1 B1 6 pieces, squamous mucosa up to ~0.5mm, 10-25% thickness 8.5 Esophagus Esophagus - Mucosa 0006920 298 503 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990873 302843 0.980266 0.993193 0.86545 21993 1 76 0.00264655 203 0 8.57475e+07 0.0193077 455946 8.63352e+07 6.31376e+06 22006 4.2655e+07 0 0.114816 0.993193 0.859559 8.57475e+07 0.00300196 1.92447e+07 1.06471e+07 1.94619e+07 207 1.94986e+07 1.92437e+07 0.00282384 1.94041e+07 49.8786 0.00528111 0.995514 0 50.2806 GTEX-17MFQ-0626-SM-793A7 1 B1 6 pieces, confirmed target muscularis 9.1 Esophagus Esophagus - Muscularis 0004648 306 495 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993649 345250 0.97673 0.994583 0.843026 20847 1 76 0.0020555 134 0 5.63525e+07 0.0229068 396588 5.66594e+07 4.48317e+06 20860 2.80351e+07 0 0.133704 0.994583 0.838459 5.63525e+07 0.00272527 1.22339e+07 4.14344e+06 1.22511e+07 140 1.23196e+07 1.06395e+07 0.00239007 1.22146e+07 49.7859 0.0069995 0.995517 0 50.035 GTEX-17MFQ-0826-SM-793C8 1 B1 2 pieces, spermatogenesis is present 7.8 Testis Testis 0000473 328 473 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992233 415549 0.922113 0.993316 0.699328 32709 1 76 0.00299772 151 0 7.4617e+07 0.0775667 507302 7.51191e+07 1.08625e+07 32775 3.71798e+07 0 0.222785 0.993316 0.694654 7.4617e+07 0.00325685 1.55411e+07 1.13456e+07 1.55058e+07 140 1.55938e+07 1.21698e+07 0.00312714 1.55214e+07 49.8837 0.0067533 0.994398 0 49.9431 GTEX-17MFQ-0926-SM-7LG4S 1 B1 2 pieces, fibroadipose elements only, mild gynecomastoid stromal hyperplasia 6.8 Breast Breast - Mammary Tissue 0008367 325 476 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983694 297328 0.977605 0.988988 0.836532 23468 1 76 0.00325567 278 0 9.27783e+07 0.0220324 544218 9.38114e+07 1.32036e+07 23490 4.59942e+07 0 0.141072 0.988988 0.82732 9.27783e+07 0.00532008 2.03981e+07 1.01622e+07 2.05139e+07 260 2.07186e+07 1.75986e+07 0.00428235 2.06552e+07 49.9234 0.00580119 0.994281 0 50.1415 GTEX-17MFQ-1026-SM-7KFSZ 1 B1 6 pieces, well preserved, abundant lymphoid aggregates (rep delineated) are 50-60% of tissue 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 341 460 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992757 85945 0.968031 0.993851 0.79728 24354 1 76 0.002949 139 0 6.85478e+07 0.0313791 273962 6.89719e+07 4.98347e+06 24383 3.41217e+07 0 0.170751 0.993851 0.792378 6.85478e+07 0.00320715 1.5019e+07 6.097e+06 1.51781e+07 157 1.51569e+07 1.16636e+07 0.00307793 1.51156e+07 49.9317 0.00397208 0.994946 0 50.2635 GTEX-17MFQ-1126-SM-7LT9O 1 B1 2 pieces, minimal fascia 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 328 473 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989675 374320 0.976197 0.992879 0.825677 23840 1 76 0.00248802 276 0 9.78989e+07 0.0234734 721681 9.8601e+07 1.05342e+07 23864 4.86633e+07 0 0.15052 0.992879 0.819798 9.78989e+07 0.00372209 2.15403e+07 9.1945e+06 2.16313e+07 266 2.18082e+07 1.76555e+07 0.00310306 2.16542e+07 49.8228 0.0073192 0.996084 0 50.1054 GTEX-17MFQ-1226-SM-7KFSA 1 B1 6 pieces, confirmed target muscularis, ~35% stroma & trace mucosa, delineated 6.6 Colon Colon - Sigmoid 0001159 337 464 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992067 274676 0.974201 0.993892 0.827775 23007 1 76 0.00293514 196 0 7.91525e+07 0.0255542 659186 7.9639e+07 6.54332e+06 23032 3.93779e+07 0 0.146427 0.993892 0.822718 7.91525e+07 0.00285888 1.70236e+07 6.62135e+06 1.739e+07 207 1.73924e+07 1.28041e+07 0.00289708 1.71568e+07 49.659 0.00827718 0.995717 0 50.5324 GTEX-17MFQ-1326-SM-718BX 1 B1 2 pieces, hyperplastic glandular pattern 6 Prostate Prostate 0002367 349 452 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.959715 299182 0.963161 0.976065 0.768105 26503 1 76 0.00256823 372 0 1.15812e+08 0.0366057 985354 1.18652e+08 6.25882e+06 26550 5.66923e+07 0 0.195056 0.976065 0.74972 1.15812e+08 0.00586082 2.50658e+07 1.28825e+07 2.50451e+07 360 2.596e+07 1.28828e+07 0.00418695 2.59795e+07 50.0188 0.00830456 0.992414 0 49.9793 GTEX-17MFQ-1326-SM-7KFRL 1 B1 2 pieces, hyperplastic glandular pattern 6 Prostate Prostate 0002367 349 452 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.990574 289368 0.965639 0.992551 0.789677 24635 1 76 0.00296468 200 0 8.27918e+07 0.0341391 730163 8.34132e+07 6.53342e+06 24669 4.11754e+07 0 0.175962 0.992551 0.783794 8.27918e+07 0.00313877 1.80539e+07 8.78693e+06 1.84114e+07 247 1.841e+07 9.25396e+06 0.00305156 1.82113e+07 49.7288 0.00875357 0.994528 0 50.4901 GTEX-17MFQ-1526-SM-7KFRR 0 B1 6 pieces, trace adherent nubbins of dermal fat, delineated; squamous epithelium is ~50-60 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 362 439 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993242 289192 0.975415 0.994541 0.842474 23331 1 76 0.00264905 225 0 8.51636e+07 0.024336 558607 8.56311e+07 6.05841e+06 23353 4.24047e+07 0 0.132941 0.994541 0.837875 8.51636e+07 0.0029307 1.86828e+07 9.16996e+06 1.89654e+07 230 1.89286e+07 1.53204e+07 0.00278969 1.88331e+07 49.8736 0.00652341 0.99584 0 50.3753 GTEX-17MFQ-1626-SM-7938Z 1 B1 2 pieces, ~50% glandular parenchyma (dispersed aggregates), delineated; rest is skeletal muscle/stroma/squamous mucosa 9 Salivary Gland Minor Salivary Gland 0006330 359 442 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994267 330961 0.973794 0.994804 0.800351 22290 1 76 0.00196324 141 0 5.2893e+07 0.0257199 143808 5.31693e+07 2.39115e+06 22306 2.63289e+07 0 0.173443 0.994804 0.796192 5.2893e+07 0.00241878 1.19789e+07 7.83764e+06 1.19879e+07 128 1.20962e+07 9.6192e+06 0.00219089 1.18987e+07 49.5885 0.00270472 0.99534 0 50.0189 GTEX-17MFQ-1726-SM-793C7 0 B1 6 pieces, trace dermal fat, delineated; squamous epithelium is ~50-60 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 367 434 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993532 358199 0.971094 0.994881 0.767135 23742 1 76 0.00285526 184 0 7.17447e+07 0.0287039 550390 7.21138e+07 1.01107e+07 23770 3.57386e+07 0 0.203959 0.994881 0.763208 7.17447e+07 0.00352236 1.57808e+07 7.75092e+06 1.57882e+07 165 1.58148e+07 1.10267e+07 0.00318836 1.58472e+07 50.0511 0.00763224 0.996231 0 50.0117 GTEX-17MFQ-1826-SM-7DHLS 0 B1 2 pieces, ~10% fascia, delineated 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 376 425 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990354 166885 0.974609 0.991467 0.794101 23148 1 76 0.0034954 167 0 7.96681e+07 0.0250385 298123 8.03538e+07 6.29152e+06 23176 3.96353e+07 0 0.180508 0.991467 0.787325 7.96681e+07 0.00531747 1.74782e+07 6.6679e+06 1.76497e+07 175 1.76845e+07 1.3886e+07 0.00440541 1.7526e+07 49.7749 0.00371013 0.992581 0 50.2441 GTEX-17MFQ-1926-SM-793A6 0 B1 2 pieces, minimal interstitital fat 9.1 Muscle Muscle - Skeletal 0011907 372 429 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995505 190269 0.980156 0.996156 0.872198 19014 1 76 0.00152964 113 0 5.10776e+07 0.0195537 391702 5.12747e+07 2.11318e+06 19020 2.5471e+07 0 0.107958 0.996156 0.868845 5.10776e+07 0.00191788 1.07694e+07 5.10323e+06 1.08596e+07 124 1.08711e+07 1.08577e+07 0.00172363 1.07857e+07 49.8029 0.00763928 0.996807 0 50.2086 GTEX-17MFQ-2126-SM-7LG5W 0 B1 2 pieces muscular artery, no atherosis, adherent nubbin fibrofatty tissue, ~1mm, delineated 8.3 Blood Vessel Artery - Tibial 0007610 403 398 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981955 568125 0.976033 0.98725 0.845592 22204 1 76 0.00355103 165 0 8.15339e+07 0.0235111 318101 8.25868e+07 1.24169e+07 22224 4.03701e+07 0 0.130442 0.98725 0.834811 8.15339e+07 0.00533042 1.75376e+07 7.32089e+06 1.77949e+07 177 1.80376e+07 1.6388e+07 0.00443595 1.76987e+07 49.5258 0.00385172 0.992546 0 50.3641 GTEX-183FY-0003-SM-6RBJZ B1 Blood Whole Blood 0013756 -68 BP-51498 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/11/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-183FY-0003-SM-6UH1R B1 Blood Whole Blood 0013756 -68 BP-51498 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/11/2014 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-183FY-0005-SM-9KNTO B1 8.9 Blood Whole Blood 0013756 -68 BP-51499 RNA isolation_PAXgene Blood RNA (Manual) 04/11/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991638 994489 0.949678 0.99273 0.796452 19698 1 76 0.00287345 204 0 9.9287e+07 0.049888 405826 1.00014e+08 1.19724e+07 19717 4.94821e+07 0 0.153226 0.99273 0.790662 9.9287e+07 0.00367805 2.15035e+07 5.10964e+07 2.17283e+07 223 2.17716e+07 2.0656e+07 0.00327531 2.15859e+07 49.7859 0.00405769 0.993822 0 50.26 GTEX-183FY-0008-SM-EAZBL B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 244 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99319 498316 0.976736 0.994108 0.843509 21199 1 76 0.00172968 228 0 9.84783e+07 0.0229212 378561 9.9062e+07 7.29007e+06 21220 4.90913e+07 0 0.133228 0.994108 0.838539 9.84783e+07 0.00265602 2.19949e+07 1.33276e+07 2.2135e+07 244 2.21384e+07 2.56577e+07 0.00219242 2.20821e+07 49.9363 0.00382145 0.995025 0 50.1588 GTEX-183FY-0126-SM-7LT9P 0 B1 6 pieces; squamous epithelium is ~60 microns; minimal dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 245 570 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991841 292982 0.972327 0.993816 0.810217 25383 1 76 0.00257505 294 0 1.08321e+08 0.0273818 569936 1.08995e+08 1.11322e+07 25415 5.39211e+07 0 0.16211 0.993816 0.805206 1.08321e+08 0.00334115 2.37055e+07 1.24074e+07 2.3887e+07 272 2.39722e+07 2.00497e+07 0.00295734 2.38147e+07 49.8352 0.00522902 0.995791 0 50.1906 GTEX-183FY-0226-SM-7LG54 0 B1 2 pieces; minimal interstitial fat; rep. delineated 8 Muscle Muscle - Skeletal 0011907 255 560 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980094 401464 0.985317 0.986725 0.877808 19551 1 76 0.0032207 214 0 8.38352e+07 0.0144233 934592 8.4963e+07 1.29912e+07 19559 4.15075e+07 0 0.107509 0.986725 0.866155 8.38352e+07 0.0050283 1.78654e+07 1.69423e+07 1.78891e+07 237 1.81319e+07 1.77858e+07 0.00411843 1.81123e+07 49.973 0.011 0.993357 0 50.0331 GTEX-183FY-0326-SM-793BY 0 B1 2 pieces; fascia/vascular elements are ~10% rep delineated 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 259 556 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994381 258673 0.975319 0.995534 0.808624 22495 1 76 0.00284227 142 0 6.76367e+07 0.0244049 449783 6.79401e+07 9.86214e+06 22519 3.37117e+07 0 0.166695 0.995534 0.805013 6.76367e+07 0.00340153 1.48832e+07 6.29582e+06 1.49226e+07 154 1.49495e+07 1.17875e+07 0.00312158 1.49295e+07 49.9666 0.00662029 0.996687 0 50.0661 GTEX-183FY-0426-SM-7MKGK 0 B1 2 pieces, no adherent fat; good specimen 6.9 Nerve Nerve - Tibial 0001323 265 550 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980236 250504 0.971736 0.987677 0.807301 23673 1 76 0.00368968 153 0 7.12841e+07 0.0279694 556916 7.21735e+07 1.01375e+07 23698 3.52465e+07 0 0.164435 0.987677 0.797353 7.12841e+07 0.00599115 1.55049e+07 7.09165e+06 1.57196e+07 159 1.59197e+07 1.18284e+07 0.00483175 1.58098e+07 49.8268 0.00771635 0.995118 0 50.3437 GTEX-183FY-0526-SM-7939Z 0 B1 2 pieces, no adherent fat; good specimen 8.7 Blood Vessel Artery - Tibial 0007610 269 546 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992425 468973 0.976461 0.993239 0.857347 20425 1 76 0.00213079 133 0 5.49753e+07 0.023047 191948 5.53495e+07 5.03296e+06 20437 2.73076e+07 0 0.119114 0.993239 0.851551 5.49753e+07 0.00277548 1.19915e+07 4.12293e+06 1.19418e+07 134 1.20709e+07 1.13955e+07 0.00245287 1.191e+07 49.6646 0.00346793 0.994054 0 49.8962 GTEX-183FY-0626-SM-79OKR 1 B1 2 pieces; no abnormalities 7 Thyroid Thyroid 0002046 346 469 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.974631 284316 0.965333 0.978888 0.732721 23571 1 76 0.0051811 112 0 5.85826e+07 0.034402 171622 5.9846e+07 1.41901e+07 23607 2.91194e+07 0 0.232611 0.978888 0.717252 5.85826e+07 0.00656704 1.27643e+07 5.93969e+06 1.27892e+07 117 1.28915e+07 9.06673e+06 0.00587105 1.28951e+07 50.0069 0.00286773 0.983146 0 50.0488 GTEX-183FY-0726-SM-793C3 1 B1 2 pieces, diffuse alvoelar damage/ARDS, fibrosing pneumonitis, chronic congestion 7.8 Lung Lung 0008952 351 464 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994061 404822 0.976593 0.995256 0.810612 23574 1 76 0.0029045 139 0 7.32084e+07 0.0231628 198882 7.35573e+07 1.01629e+07 23603 3.64778e+07 0 0.165981 0.995256 0.806767 7.32084e+07 0.00338739 1.63637e+07 7.7811e+06 1.64288e+07 158 1.6491e+07 1.43382e+07 0.00314565 1.63865e+07 49.8411 0.00270377 0.99645 0 50.0993 GTEX-183FY-1026-SM-7939A 0 B1 6 pieces; squamous epithelium is ~50-60 microns; minimal adherent dermal fat 8.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 366 449 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991858 489800 0.972583 0.993084 0.78881 23036 1 76 0.00221865 150 0 5.60272e+07 0.0271435 167449 5.64174e+07 4.58956e+06 23055 2.78457e+07 0 0.183773 0.993084 0.783355 5.60272e+07 0.00293431 1.2386e+07 5.48466e+06 1.23237e+07 132 1.24748e+07 1.01912e+07 0.00257604 1.23044e+07 49.6561 0.00296804 0.994311 0 49.8739 GTEX-183FY-1126-SM-7DHLJ 1 B1 2 pieces, fibroadipose elements only 8 Breast Breast - Mammary Tissue 0008367 373 442 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991852 103789 0.97807 0.993125 0.836058 22332 1 76 0.00343218 162 0 7.33241e+07 0.0216383 392943 7.38317e+07 5.59939e+06 22346 3.65207e+07 0 0.142012 0.993125 0.83031 7.33241e+07 0.00517035 1.61588e+07 6.77052e+06 1.63612e+07 168 1.63738e+07 1.37975e+07 0.00430015 1.62302e+07 49.7799 0.00532215 0.994398 0 50.3112 GTEX-183FY-1226-SM-7DHLK 1 B1 2 pieces, minimal interstitial fascia 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 377 438 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991775 90994 0.978483 0.993075 0.829757 22243 1 76 0.00342389 140 0 6.86316e+07 0.0212091 576215 6.91102e+07 5.21132e+06 22258 3.41856e+07 0 0.148726 0.993075 0.82401 6.86316e+07 0.00510687 1.5131e+07 6.33553e+06 1.53652e+07 158 1.53569e+07 1.21621e+07 0.00426428 1.52181e+07 49.773 0.00833763 0.994374 0 50.384 GTEX-183FY-1326-SM-7DHLL 1 B1 6 pieces, confirmed target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 389 426 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991607 94122 0.975342 0.992907 0.828092 22468 1 76 0.00343755 144 0 7.06502e+07 0.024328 614118 7.11549e+07 5.47034e+06 22484 3.51797e+07 0 0.14725 0.992907 0.822218 7.06502e+07 0.00514704 1.536e+07 6.03384e+06 1.55362e+07 160 1.55461e+07 1.26479e+07 0.00429117 1.54329e+07 49.8174 0.00863071 0.994207 0 50.2851 GTEX-183FY-1426-SM-7DHLM 1 B1 6 pieces, confirmed target muscularis 8.2 Colon Colon - Sigmoid 0001159 395 420 BP-52773 RNA Extraction from Paxgene-derived Lysate Plate Based 05/15/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991238 138545 0.975117 0.992491 0.838355 21870 1 76 0.00344572 159 0 7.25703e+07 0.0245664 422949 7.31194e+07 5.56849e+06 21887 3.61253e+07 0 0.136763 0.992491 0.832059 7.25703e+07 0.00519109 1.56988e+07 6.22102e+06 1.59427e+07 165 1.59453e+07 1.36034e+07 0.0043173 1.57767e+07 49.7342 0.00578436 0.993743 0 50.3854 GTEX-183FY-1526-SM-7IGOW 1 B1 6 pieces, squamous mucosa up to ~0.5mm, ~30% thickness 5.8 Esophagus Esophagus - Mucosa 0006920 392 423 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99531 402000 0.976035 0.995639 0.842582 21872 1 76 0.00173826 175 0 7.9966e+07 0.0237156 377797 8.03162e+07 2.49048e+06 21888 3.98673e+07 0 0.133453 0.995639 0.838908 7.9966e+07 0.0023132 1.80293e+07 1.23309e+07 1.81514e+07 192 1.81817e+07 1.68843e+07 0.00202564 1.80276e+07 49.7872 0.00470387 0.995968 0 50.1687 GTEX-183FY-1626-SM-793D8 1 B1 6 pieces, abundant well preserved lymphoid/Peyer aggregates are ~50% total tissue 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 408 407 BP-52658 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993293 397330 0.960408 0.99447 0.742745 24942 1 76 0.00314212 160 0 8.15918e+07 0.0391159 280173 8.20455e+07 1.14686e+07 24981 4.06423e+07 0 0.217664 0.99447 0.738637 8.15918e+07 0.00350098 1.789e+07 1.07072e+07 1.79249e+07 167 1.79943e+07 1.39673e+07 0.00332133 1.79114e+07 49.8847 0.00341485 0.995646 0 50.0487 GTEX-183FY-1726-SM-7LT9Q 1 B1 6 pieces, confirmed target muscularis 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 406 409 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989359 391760 0.975644 0.992538 0.83136 23459 1 76 0.00251021 283 0 1.06732e+08 0.0240226 981546 1.07535e+08 1.1355e+07 23485 5.30523e+07 0 0.144284 0.992538 0.825156 1.06732e+08 0.00390046 2.31457e+07 1.05744e+07 2.3244e+07 278 2.34411e+07 1.97696e+07 0.00320311 2.32556e+07 49.8014 0.00912772 0.995718 0 50.106 GTEX-183FY-1926-SM-7KFRI 1 B1 2 pieces, spermatogenesis is present 7.6 Testis Testis 0000473 412 403 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990908 588582 0.934705 0.992905 0.74443 34336 1 76 0.00266658 287 0 1.12606e+08 0.064908 691438 1.1341e+08 7.76439e+06 34412 5.60397e+07 0 0.190275 0.992905 0.739148 1.12606e+08 0.00279083 2.34327e+07 1.30463e+07 2.36334e+07 278 2.37898e+07 2.05498e+07 0.00272858 2.34785e+07 49.6707 0.00609678 0.994902 0 50.2133 GTEX-183WM-0004-SM-6RBK2 C1 Blood Whole Blood 0013756 798 BP-51554 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/14/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-183WM-0004-SM-6UH1T C1 Blood Whole Blood 0013756 798 BP-51554 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/14/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-183WM-0005-SM-9JGFW C1 7.1 Blood Whole Blood 0013756 798 BP-51578 RNA isolation_PAXgene Blood RNA (Manual) 04/15/2014 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992175 663289 0.97258 0.993414 0.809495 21624 1 76 0.00209684 380 0 1.21497e+08 0.0269116 1.34126e+06 1.22303e+08 5.86329e+06 21637 6.0529e+07 0 0.163085 0.993414 0.804164 1.21497e+08 0.00328956 2.72613e+07 6.71257e+07 2.74722e+07 343 2.74575e+07 2.53911e+07 0.00269246 2.7432e+07 49.9768 0.0109667 0.994654 0 50.1926 GTEX-183WM-0008-SM-EAZBN C1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 873 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99296 587818 0.973315 0.993863 0.843902 21523 1 76 0.0017049 290 0 1.10952e+08 0.0263033 508327 1.11637e+08 8.32532e+06 21548 5.53083e+07 0 0.129413 0.993863 0.838724 1.10952e+08 0.00256736 2.4697e+07 2.00339e+07 2.48936e+07 280 2.48893e+07 2.84422e+07 0.00213573 2.48024e+07 49.9126 0.0045534 0.994766 0 50.1983 GTEX-183WM-0011-R11a-SM-718A5 C1, A1 6.5 Brain Brain - Cerebellar Hemisphere 0002037 820 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966757 652674 0.934108 0.97967 0.726276 25045 1 76 0.00263447 371 0 1.04231e+08 0.0655674 4.51262e+06 1.06394e+08 4.85082e+06 25091 5.12152e+07 0 0.207833 0.97967 0.71151 1.04231e+08 0.00550738 2.19735e+07 2.53664e+07 2.20726e+07 332 2.27169e+07 9.82111e+06 0.00405199 2.25703e+07 49.8382 0.0424142 0.992583 0 50.1125 GTEX-183WM-0011-R1a-SM-718A8 C1, A1 5.9 Brain Brain - Hippocampus 0001954 820 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967057 593986 0.967108 0.980577 0.844894 23879 1 76 0.00220737 371 0 1.25557e+08 0.032731 1.80274e+07 1.28044e+08 6.05592e+06 23903 6.17128e+07 0 0.122214 0.980577 0.828483 1.25557e+08 0.00511189 2.72364e+07 3.48164e+07 2.77526e+07 402 2.8282e+07 7.60062e+06 0.00363961 2.81321e+07 49.8671 0.140791 0.994098 0 50.4693 GTEX-183WM-0011-R4a-SM-7LG6S C1, A1 5.7 Brain Brain - Amygdala 0001876 820 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.973528 473131 0.971435 0.981401 0.818614 20443 1 76 0.00320124 270 0 9.14466e+07 0.0285056 1.82953e+07 9.31796e+07 1.46336e+07 20450 4.52004e+07 0 0.15282 0.981401 0.803389 9.14466e+07 0.00531292 1.97387e+07 6.08267e+07 1.95944e+07 317 1.94619e+07 4.25438e+06 0.00424861 2.04579e+07 51.2475 0.196345 0.989275 0 49.8165 GTEX-183WM-0011-R5a-SM-718A4 C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 820 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.97324 477653 0.965195 0.984533 0.830912 23318 1 76 0.00217015 369 0 1.00624e+08 0.0346425 1.2793e+07 1.02204e+08 4.73956e+06 23331 4.96173e+07 0 0.134283 0.984533 0.818061 1.00624e+08 0.00476129 2.17101e+07 3.22864e+07 2.21087e+07 336 2.24132e+07 6.6079e+06 0.00345086 2.23542e+07 49.9341 0.125171 0.995827 0 50.4548 GTEX-183WM-0011-R6b-SM-72D66 C1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 820 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992377 288019 0.961489 0.993982 0.821802 24536 1 76 0.0025217 266 0 8.19857e+07 0.0382843 7.58682e+06 8.24821e+07 4.45257e+06 24555 4.08329e+07 0 0.139687 0.993982 0.816856 8.19857e+07 0.0033701 1.78111e+07 1.60168e+07 1.81964e+07 305 1.80935e+07 7.56661e+06 0.00294522 1.80323e+07 49.9153 0.0919814 0.995587 0 50.5351 GTEX-183WM-0011-R7b-SM-731AX C1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 820 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991132 317962 0.96819 0.99298 0.843247 22085 1 76 0.00264272 263 0 7.25496e+07 0.0316693 8.96323e+06 7.30624e+07 3.23462e+06 22093 3.61246e+07 0 0.124942 0.99298 0.837328 7.25496e+07 0.00289047 1.57363e+07 1.7618e+07 1.6373e+07 288 1.62367e+07 5.00882e+06 0.00276636 1.59889e+07 49.6156 0.122679 0.994829 0 50.9914 GTEX-183WM-0011-R8a-SM-7189W C1, A1 6.3 Brain Brain - Hypothalamus 0001898 820 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.96807 662644 0.958672 0.980931 0.832698 23944 1 76 0.00226788 376 0 1.3086e+08 0.0411586 2.14949e+07 1.33404e+08 6.77761e+06 23970 6.436e+07 0 0.125974 0.980931 0.816819 1.3086e+08 0.00516844 2.84052e+07 3.51437e+07 2.87945e+07 388 2.93007e+07 8.34153e+06 0.00369914 2.93643e+07 50.0541 0.161127 0.993791 0 50.3403 GTEX-183WM-0126-SM-7LTAB 0 C1 6 pieces, squamous epithelium up to ~ 60-70 microns. Minimal dermal fat. 8 Skin Skin - Sun Exposed (Lower leg) 0004264 872 577 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988995 366117 0.981804 0.991991 0.778337 23785 1 76 0.00263392 280 0 9.9638e+07 0.0178837 597577 1.00443e+08 1.01891e+07 23819 4.95157e+07 0 0.203467 0.991991 0.772103 9.9638e+07 0.00398616 2.2353e+07 1.32078e+07 2.24739e+07 264 2.26736e+07 1.86563e+07 0.003308 2.2444e+07 49.7456 0.00594944 0.994986 0 50.1349 GTEX-183WM-0226-SM-7LT8T 0 C1 2 pieces, ~10% fascia 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 873 576 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988411 558049 0.968147 0.991677 0.776469 23873 1 76 0.00276871 280 0 1.13048e+08 0.0314728 646447 1.13997e+08 1.2308e+07 23905 5.61667e+07 0 0.191678 0.991677 0.770006 1.13048e+08 0.00389848 2.46231e+07 2.52322e+07 2.49122e+07 305 2.50694e+07 2.00922e+07 0.00333174 2.48297e+07 49.7598 0.00567073 0.994944 0 50.2918 GTEX-183WM-0326-SM-72D5V 0 C1 6 pieces, squamous epithelium up to !30-40 microns. Minimal dermal fat. 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 875 575 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.99172 88308 0.972323 0.993255 0.748305 22448 1 76 0.00252538 123 0 5.6305e+07 0.0274755 319056 5.66873e+07 4.27706e+06 22474 2.80357e+07 0 0.224018 0.993255 0.743258 5.6305e+07 0.00326532 1.24056e+07 5.70946e+06 1.24579e+07 128 1.24461e+07 9.08036e+06 0.00289478 1.25027e+07 50.1136 0.00562835 0.994791 0 50.1052 GTEX-183WM-0426-SM-731B1 0 C1 2 pieces, ~30% interstititial fat, rep delineated; moderate myocytic atrophy 6.3 Muscle Muscle - Skeletal 0011907 877 573 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990158 141775 0.978891 0.991935 0.829859 21230 1 76 0.00278855 150 0 6.41568e+07 0.0208756 2.48512e+06 6.46784e+07 3.08286e+06 21246 3.19193e+07 0 0.149032 0.991935 0.823166 6.41568e+07 0.00323845 1.41897e+07 5.98735e+06 1.43379e+07 163 1.43385e+07 1.05669e+07 0.0030131 1.4293e+07 49.9206 0.0384227 0.993712 0 50.2598 GTEX-183WM-0526-SM-731BD 0 C1 2 pieces, trace adherent fat, good specimens 6.1 Nerve Nerve - Tibial 0001323 878 573 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.986965 126678 0.962035 0.988409 0.706441 23789 1 76 0.00315913 147 0 6.8984e+07 0.0377086 346063 6.97929e+07 3.64182e+06 23820 3.42627e+07 0 0.255594 0.988409 0.698253 6.8984e+07 0.00351872 1.50791e+07 6.54472e+06 1.51007e+07 149 1.51307e+07 9.62616e+06 0.00333866 1.5144e+07 50.0219 0.00495842 0.989852 0 50.0358 GTEX-183WM-0726-SM-7LTAA 1 C1 2 pieces, fibroadipose elements, trace atrophic ductal structures, rep delineated 6.1 Breast Breast - Mammary Tissue 0008367 881 571 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987779 380673 0.976878 0.990841 0.814281 23491 1 76 0.00258616 280 0 1.14244e+08 0.0227642 2.78366e+06 1.153e+08 1.20219e+07 23521 5.67478e+07 0 0.162596 0.990841 0.806824 1.14244e+08 0.0039156 2.51256e+07 1.96897e+07 2.5184e+07 298 2.53965e+07 1.88426e+07 0.00324883 2.52386e+07 49.8441 0.0241427 0.993904 0 50.0581 GTEX-183WM-0926-SM-718AN 1 C1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 885 568 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966646 353149 0.979336 0.980767 0.821056 23461 1 76 0.00220841 369 0 1.05768e+08 0.0204345 4.57013e+06 1.07842e+08 4.61134e+06 23487 5.19884e+07 0 0.15828 0.980767 0.805264 1.05768e+08 0.00518731 2.28251e+07 1.29666e+07 2.28656e+07 331 2.35895e+07 1.45899e+07 0.00367641 2.34451e+07 49.8465 0.042378 0.994888 0 50.0443 GTEX-183WM-1726-SM-7KFT5 2 C1 6 pieces, squamous mucosa up to ~ 0.25mm, early sloughing 6.4 Esophagus Esophagus - Mucosa 0006920 902 554 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991616 190265 0.970692 0.992768 0.785396 23808 1 76 0.00285 208 0 8.40601e+07 0.0291377 660175 8.46724e+07 6.17888e+06 23835 4.18617e+07 0 0.185296 0.992768 0.779716 8.40601e+07 0.00290847 1.86133e+07 9.60593e+06 1.88822e+07 218 1.88485e+07 1.33332e+07 0.0028792 1.87487e+07 49.8673 0.00779682 0.99392 0 50.3586 GTEX-183WM-1926-SM-72D5F 1 C1 2 pieces, atropohic cortex, post menopausal, rep delineated 6.6 Ovary Ovary 0000992 910 547 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.989833 302474 0.958463 0.990885 0.730165 23771 1 76 0.00274658 161 0 8.12993e+07 0.0413219 350233 8.20472e+07 5.04187e+06 23812 4.04372e+07 0 0.228298 0.990885 0.72351 8.12993e+07 0.00344556 1.75937e+07 1.63536e+07 1.76674e+07 164 1.76794e+07 1.51487e+07 0.0030957 1.76804e+07 50.0015 0.00426868 0.991937 0 50.1045 GTEX-183WM-2126-SM-7LG4I 2 C1 6 pieces squamous mucosa atrophic, partly sloughed. Ectopic stromal calcification, ~0.5mm, delineated, unknown etiology, but benign. 5.9 Vagina Vagina 0000996 914 544 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.969905 281230 0.967064 0.976575 0.747591 25479 1 76 0.00360074 279 0 1.03666e+08 0.0326811 1.24402e+06 1.06153e+08 1.56162e+07 25526 5.12552e+07 0 0.219473 0.976575 0.730079 1.03666e+08 0.00587647 2.25024e+07 1.30146e+07 2.28434e+07 263 2.30916e+07 1.59581e+07 0.00473084 2.29252e+07 49.8191 0.0117191 0.983245 0 50.376 GTEX-183WM-2526-SM-731BP 1 C1 6 pieces, confirmed target muscularis 5.7 Colon Colon - Sigmoid 0001159 921 539 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.987276 90704 0.970711 0.988792 0.827326 22245 1 76 0.00290673 148 0 6.42031e+07 0.0290513 2.02040e+06 6.49309e+07 3.28502e+06 22264 3.19219e+07 0 0.143385 0.988792 0.818053 6.42031e+07 0.00327826 1.3866e+07 6.55272e+06 1.4008e+07 158 1.4001e+07 1.12583e+07 0.00309221 1.39733e+07 49.9504 0.0311162 0.990308 0 50.2546 GTEX-183WM-2626-SM-7KFRY 2 C1 2 pieces, regressive changes, ~2.5mm colloid cyst, encircled 6.2 Thyroid Thyroid 0002046 924 537 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989315 186183 0.966889 0.991934 0.789176 23610 1 76 0.00281758 141 0 6.44335e+07 0.0328197 519541 6.49574e+07 5.14536e+06 23631 3.20227e+07 0 0.177713 0.991934 0.78281 6.44335e+07 0.00311221 1.39511e+07 8.7265e+06 1.41918e+07 145 1.42228e+07 1.16236e+07 0.00296451 1.40893e+07 49.7643 0.00799818 0.994552 0 50.4276 GTEX-183WM-2726-SM-7KFRF 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 940 522 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989968 686518 0.945496 0.992304 0.7468 26048 1 76 0.00312144 376 0 1.51045e+08 0.0542272 5.75857e+06 1.52216e+08 1.24836e+07 26110 7.50652e+07 0 0.198695 0.992304 0.741053 1.51045e+08 0.00303812 3.22908e+07 2.1725e+07 3.28707e+07 373 3.29485e+07 1.45166e+07 0.00307988 3.25151e+07 49.669 0.0378315 0.99464 0 50.445 GTEX-183WM-2826-SM-731C2 1 C1 4 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 943 519 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988773 381507 0.963568 0.990584 0.830416 23427 1 76 0.00281585 199 0 7.17012e+07 0.036141 5.65199e+06 7.23827e+07 3.97048e+06 23444 3.56232e+07 0 0.133152 0.990584 0.822597 7.17012e+07 0.00330851 1.57666e+07 1.17416e+07 1.60299e+07 223 1.60219e+07 7.5707e+06 0.00306173 1.58894e+07 49.7925 0.0780848 0.992395 0 50.4141 GTEX-18464-0004-SM-DINAW C1 Blood Whole Blood 0013756 583 BP-51713 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18464-0004-SM-DJWXS C1 Blood Whole Blood 0013756 583 BP-51713 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2014 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18464-0011-R10a-SM-72D6X C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 600 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991313 206612 0.962202 0.993017 0.843286 22482 1 76 0.0025011 128 0 5.56197e+07 0.0372964 1.52564e+06 5.60108e+07 3.95108e+06 22495 2.77054e+07 0 0.118917 0.993017 0.837397 5.56197e+07 0.00319616 1.21623e+07 6.96004e+06 1.22852e+07 146 1.2297e+07 7.62668e+06 0.00284803 1.22349e+07 49.8736 0.0272384 0.99472 0 50.2513 GTEX-18464-0011-R11a-SM-72D76 C1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 600 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991965 207190 0.947229 0.993538 0.731387 21945 1 76 0.00274184 110 0 5.6743e+07 0.0522857 534834 5.7112e+07 4.0262e+06 21968 2.82494e+07 0 0.215842 0.993538 0.726661 5.6743e+07 0.00334822 1.22501e+07 6.13333e+06 1.22951e+07 125 1.23363e+07 7.40649e+06 0.00304455 1.22871e+07 49.9001 0.00936465 0.995111 0 50.0917 GTEX-18464-0011-R2a-SM-731AL C1, A1 5.7 Brain Brain - Substantia nigra 0002038 600 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990481 222620 0.970424 0.992472 0.852131 21450 1 76 0.00329771 201 0 6.89006e+07 0.029448 7.50188e+06 6.94232e+07 3.23478e+06 21464 3.42907e+07 0 0.118293 0.992472 0.845716 6.89006e+07 0.00370095 1.50444e+07 1.29246e+07 1.5722e+07 230 1.5448e+07 4.76225e+06 0.00349893 1.54212e+07 49.9566 0.10806 0.994463 0 51.1012 GTEX-18464-0011-R4a-SM-7LG6T C1, A1 6.7 Brain Brain - Amygdala 0001876 600 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978084 681542 0.961683 0.983662 0.80165 23002 1 76 0.00399244 270 0 8.70794e+07 0.0381371 8.81114e+06 8.85258e+07 1.27355e+07 23021 4.31059e+07 0 0.160033 0.983662 0.788552 8.70794e+07 0.00573793 1.85797e+07 4.70246e+07 1.86988e+07 288 1.87477e+07 6.64466e+06 0.00486024 1.89178e+07 50.2258 0.0995319 0.98924 0 50.1599 GTEX-18464-0011-R5b-SM-718A6 C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 600 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.971307 1.07508e+06 0.947826 0.982771 0.791822 26367 1 76 0.00266496 271 0 1.1845e+08 0.051754 3.96298e+06 1.20526e+08 5.45955e+06 26398 5.83377e+07 0 0.156004 0.982771 0.77818 1.1845e+08 0.00516286 2.52897e+07 2.9544e+07 2.53515e+07 330 2.6065e+07 1.48715e+07 0.00389934 2.58456e+07 49.7886 0.0328806 0.994235 0 50.0611 GTEX-18464-0011-R6a-SM-731CA C1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 600 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.991526 635081 0.955345 0.993881 0.824425 24926 1 76 0.0020853 372 0 1.07817e+08 0.0442722 4.15731e+06 1.08481e+08 4.85827e+06 24952 5.36257e+07 0 0.130921 0.993881 0.81938 1.07817e+08 0.00253075 2.33904e+07 1.50239e+07 2.36517e+07 374 2.36999e+07 1.40505e+07 0.00230749 2.35708e+07 49.8635 0.038323 0.996235 0 50.2778 GTEX-18464-0011-R7b-SM-731CM C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 600 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990955 419686 0.957541 0.99289 0.835367 21975 1 76 0.00324841 197 0 6.94073e+07 0.0423227 6.13799e+06 6.99043e+07 3.32104e+06 21984 3.45405e+07 0 0.122173 0.99289 0.829427 6.94073e+07 0.00360404 1.50203e+07 1.85142e+07 1.55343e+07 233 1.53423e+07 4.68190e+06 0.00342588 1.53237e+07 49.9695 0.0878055 0.994825 0 50.8412 GTEX-18464-0011-R8a-SM-72D4Z C1, A1 6.9 Brain Brain - Hypothalamus 0001898 600 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.990592 171712 0.95936 0.992558 0.811528 23751 1 76 0.00259479 117 0 5.21823e+07 0.0403113 1.5605e+06 5.25736e+07 3.60473e+06 23772 2.59872e+07 0 0.147832 0.992558 0.805489 5.21823e+07 0.00358093 1.14719e+07 6.36224e+06 1.15497e+07 136 1.15541e+07 6.54856e+06 0.00308689 1.15599e+07 50.0127 0.0296823 0.994525 0 50.1689 GTEX-18464-0011-R9a-SM-731BK C1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 600 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990178 251312 0.960392 0.992092 0.791749 23378 1 76 0.00303123 151 0 6.55425e+07 0.039239 1.31921e+06 6.6065e+07 2.98144e+06 23405 3.26048e+07 0 0.168643 0.992092 0.785487 6.55425e+07 0.0034452 1.45102e+07 7.04504e+06 1.46973e+07 161 1.46509e+07 9.28637e+06 0.00323782 1.46696e+07 50.0318 0.0199683 0.994005 0 50.3203 GTEX-18465-0002-SM-DINCG C1 Blood Whole Blood 0013756 672 BP-51713 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18465-0002-SM-DJWXW C1 Blood Whole Blood 0013756 672 BP-51713 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2014 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18465-0006-SM-7SB6R C1 8.2 Blood Whole Blood 0013756 672 BP-51578 RNA isolation_PAXgene Blood RNA (Manual) 04/15/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98355 396422 0.974472 0.986051 0.700042 20986 1 76 0.00269181 134 0 1.00542e+08 0.0248708 430315 1.01964e+08 1.05122e+07 21022 5.00025e+07 0 0.27443 0.986051 0.690277 1.00542e+08 0.00478813 2.30001e+07 9.4015e+07 2.32056e+07 157 2.32856e+07 2.02931e+07 0.00373731 2.31857e+07 49.8926 0.00422026 0.988551 0 50.2223 GTEX-18465-0008-SM-EAZBM C1 8.7 Skin Cells - Cultured fibroblasts EFO_0002009 781 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993091 468289 0.980571 0.994047 0.85536 20168 1 76 0.0017284 287 0 1.02515e+08 0.0190848 259542 1.03129e+08 8.28192e+06 20188 5.11066e+07 0 0.125211 0.994047 0.850268 1.02515e+08 0.00259877 2.31252e+07 1.34604e+07 2.32444e+07 259 2.32624e+07 2.77191e+07 0.00216317 2.32084e+07 49.9419 0.00251668 0.995003 0 50.1285 GTEX-18465-0011-R11a-SM-72D78 C1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 690 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.992583 222313 0.952449 0.994153 0.766158 22187 1 76 0.0024811 113 0 5.49569e+07 0.047101 579244 5.52802e+07 3.74393e+06 22202 2.73656e+07 0 0.18629 0.994153 0.761679 5.49569e+07 0.00321007 1.19231e+07 5.60204e+06 1.19741e+07 131 1.20007e+07 7.46523e+06 0.00284501 1.19741e+07 49.9444 0.0104783 0.995724 0 50.1068 GTEX-18465-0011-R5a-SM-72D5J C1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 690 BP-54541 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993235 525463 0.958963 0.994553 0.827699 23089 1 76 0.00244363 368 0 8.49189e+07 0.0408361 7.10996e+06 8.5384e+07 4.44747e+06 23105 4.23128e+07 0 0.131264 0.994553 0.823191 8.49189e+07 0.00310824 1.84264e+07 2.74642e+07 1.87962e+07 335 1.87315e+07 6.7299e+06 0.0027755 1.8603e+07 49.8279 0.0832705 0.99587 0 50.4967 GTEX-18465-0011-R6a-SM-7LG6M C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 690 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976827 751686 0.959187 0.984495 0.823229 23764 1 76 0.00329657 271 0 8.38996e+07 0.0405954 8.45015e+06 8.5221e+07 1.26209e+07 23783 4.1404e+07 0 0.135957 0.984495 0.810465 8.38996e+07 0.00585841 1.82339e+07 2.84434e+07 1.79773e+07 316 1.82013e+07 7.07168e+06 0.00456751 1.85491e+07 50.4732 0.0991557 0.992162 0 49.6458 GTEX-18465-0011-R7b-SM-7LG6V C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 690 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.973651 952111 0.953008 0.981204 0.801731 23685 1 76 0.00334478 272 0 9.48399e+07 0.0467666 8.59765e+06 9.66567e+07 1.45498e+07 23708 4.68731e+07 0 0.151277 0.981204 0.786661 9.48399e+07 0.00559933 2.03577e+07 5.31998e+07 2.00384e+07 291 2.03352e+07 8.31788e+06 0.00446338 2.06511e+07 50.3853 0.0889504 0.988756 0 49.6047 GTEX-18465-0011-R8b-SM-7LG6O C1, A1 5.8 Brain Brain - Hypothalamus 0001898 690 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976433 639102 0.959057 0.984099 0.816922 23823 1 76 0.00339907 272 0 8.76089e+07 0.0407141 9.39694e+06 8.90244e+07 1.39213e+07 23837 4.32914e+07 0 0.142135 0.984099 0.803932 8.76089e+07 0.0054662 1.89109e+07 3.77468e+07 1.88714e+07 291 1.89907e+07 7.21671e+06 0.00442458 1.93533e+07 50.4727 0.105555 0.991765 0 49.9478 GTEX-18465-0126-SM-731BN 0 C1 6 pieces; well trimmed; minimal dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 780 601 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6684 01/21/2015 TruSeq.v1 RNASEQ 0.992471 278362 0.973641 0.994077 0.7837 25109 1 76 0.00208358 398 0 1.09311e+08 0.0260629 485794 1.09962e+08 6.55515e+06 25151 5.44483e+07 0 0.189941 0.994077 0.779058 1.09311e+08 0.00264564 2.38576e+07 1.0906e+07 2.40618e+07 334 2.40868e+07 1.93358e+07 0.00236416 2.39975e+07 49.9071 0.00441782 0.995684 0 50.2131 GTEX-18465-0226-SM-7LG5M 1 C1 2 pieces; 20% fibrous content; deep cassette indentations on 1 piece 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 782 599 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980813 344359 0.97824 0.98541 0.837369 23044 1 76 0.00323614 178 0 8.05852e+07 0.0213904 428669 8.17784e+07 1.11629e+07 23069 3.99438e+07 0 0.140871 0.98541 0.825152 8.05852e+07 0.00542089 1.7591e+07 9.37111e+06 1.76862e+07 188 1.78749e+07 1.57232e+07 0.00432341 1.77541e+07 49.8305 0.00524184 0.990008 0 50.135 GTEX-18465-0326-SM-7LTAD 0 C1 2 pieces; 1.7 mm fat at edge of 1 piece [marked] 8.3 Muscle Muscle - Skeletal 0011907 785 597 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.992726 364921 0.985665 0.994654 0.888366 19627 1 76 0.00219532 202 0 9.15938e+07 0.0141109 1.10232e+06 9.20861e+07 8.52818e+06 19638 4.55958e+07 0 0.0972984 0.994654 0.883617 9.15938e+07 0.00332784 1.98967e+07 9.11851e+06 1.99098e+07 246 2.01027e+07 2.13671e+07 0.00276048 1.98585e+07 49.6944 0.0119705 0.996583 0 50.0165 GTEX-18465-0426-SM-7LTAE 1 C1 2 pieces; several small (0.2 mm) focal calcifications but no plaques 8.7 Blood Vessel Artery - Tibial 0007610 787 596 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988822 475840 0.972741 0.992032 0.871166 21993 1 76 0.0024777 283 0 1.05312e+08 0.0267536 400615 1.06158e+08 1.18504e+07 22005 5.23029e+07 0 0.101575 0.992032 0.864224 1.05312e+08 0.00366256 2.21388e+07 1.50741e+07 2.23364e+07 300 2.24943e+07 2.44513e+07 0.00306821 2.22975e+07 49.7803 0.00377376 0.995242 0 50.2221 GTEX-18465-0526-SM-7LG4K 0 C1 2 pieces; well trimmed; 5% internal and external fat 5.9 Nerve Nerve - Tibial 0001323 788 595 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977947 365141 0.959997 0.984428 0.730594 25792 1 76 0.00356594 217 0 1.00001e+08 0.0397199 417149 1.01583e+08 1.51772e+07 25841 4.94531e+07 0 0.229404 0.984428 0.719217 1.00001e+08 0.00580721 2.15614e+07 1.43831e+07 2.19234e+07 249 2.21875e+07 1.39111e+07 0.0046792 2.19189e+07 49.6956 0.0041065 0.990908 0 50.4163 GTEX-18465-0626-SM-7LT8X 1 C1 2 pieces; mild emphysema 7.2 Lung Lung 0008952 795 588 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990459 287830 0.970815 0.992577 0.73772 25147 1 76 0.00299 204 0 9.31224e+07 0.0286479 390940 9.38189e+07 1.01193e+07 25198 4.62957e+07 0 0.233095 0.992577 0.732244 9.31224e+07 0.00385637 2.04409e+07 8.86749e+06 2.06129e+07 251 2.06977e+07 1.40973e+07 0.00342226 2.05416e+07 49.8107 0.00416697 0.994694 0 50.2095 GTEX-18465-0726-SM-7LG4L 1 C1 2 pieces; 10% internal and external fat & fibrous content 6.8 Heart Heart - Atrial Appendage 0006631 798 586 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981862 326068 0.971561 0.988211 0.785455 23825 1 76 0.00336605 159 0 8.73664e+07 0.0281349 1.69866e+06 8.84086e+07 1.30174e+07 23856 4.32457e+07 0 0.186106 0.988211 0.776195 8.73664e+07 0.00542251 1.8717e+07 8.82653e+06 1.8922e+07 193 1.91645e+07 1.50373e+07 0.00438767 1.89889e+07 49.7699 0.0192137 0.99456 0 50.2723 GTEX-18465-0926-SM-731AY 1 C1 2 pieces; extensive [30%] fibrous scars in both pieces, consistent with old 1nfarcts 6 Heart Heart - Left Ventricle 0006566 805 580 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.991083 125890 0.987039 0.993437 0.882073 18640 1 76 0.00146155 364 0 7.10073e+07 0.0128985 5.22619e+06 7.14765e+07 2.63577e+06 18643 3.53625e+07 0 0.104966 0.993437 0.876283 7.10073e+07 0.00192452 1.57282e+07 1.56161e+07 1.61912e+07 334 1.60909e+07 4.13534e+06 0.00169249 1.5952e+07 49.7832 0.0731176 0.99579 0 50.7254 GTEX-18465-1026-SM-7PC23 1 C1 6 pieces; no plaques; up to 0.6 mm adventitial fibrous tissue 6.5 Blood Vessel Artery - Aorta 0001496 807 579 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984997 381477 0.966737 0.988618 0.756028 23609 1 76 0.00382287 166 0 8.98648e+07 0.0329005 196263 9.08994e+07 1.59717e+07 23640 4.45368e+07 0 0.210709 0.988618 0.747423 8.98648e+07 0.00497132 1.90165e+07 9.41772e+06 1.92795e+07 194 1.93773e+07 1.41956e+07 0.00439499 1.92321e+07 49.812 0.00215912 0.992239 0 50.3434 GTEX-18465-1126-SM-7LG6E 1 C1 6 pieces; partially sloughed epithelium; foci of chronic esophagitis 5.7 Esophagus Esophagus - Mucosa 0006920 808 578 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.972126 457611 0.974661 0.979499 0.817034 22499 1 76 0.00337342 201 0 8.50534e+07 0.0250989 956042 8.68336e+07 1.20997e+07 22517 4.20334e+07 0 0.157627 0.979499 0.800284 8.50534e+07 0.00604584 1.91634e+07 1.38744e+07 1.90986e+07 244 1.94283e+07 1.21603e+07 0.00469958 1.94388e+07 50.0136 0.01101 0.986872 0 49.9154 GTEX-18465-1326-SM-7LT9K 1 C1 6 pieces; up to 1 mm external fat on 2 pieces 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 811 577 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988899 225884 0.964853 0.991713 0.771281 24229 1 76 0.00274928 202 0 8.82416e+07 0.0349269 1.42762e+06 8.8979e+07 9.57466e+06 24268 4.38512e+07 0 0.193573 0.991713 0.764889 8.82416e+07 0.00395847 1.90099e+07 8.55982e+06 1.91607e+07 255 1.92432e+07 1.16689e+07 0.00335216 1.9157e+07 49.8877 0.0160445 0.994526 0 50.1976 GTEX-18465-1426-SM-7KFTF 2 C1 2 pieces; focus of atrophy & fibrosis (annotated); small (0.4 mm) lymphoid focus (annotated) 6.4 Thyroid Thyroid 0002046 813 575 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989536 188587 0.966554 0.991961 0.765362 25020 1 76 0.00317589 202 0 8.73202e+07 0.033064 365822 8.80279e+07 7.44241e+06 25056 4.33983e+07 0 0.201192 0.991961 0.759209 8.73202e+07 0.00297601 1.89283e+07 8.78983e+06 1.92547e+07 208 1.93044e+07 1.36429e+07 0.0030762 1.90866e+07 49.7163 0.00415575 0.994385 0 50.4274 GTEX-18465-1526-SM-7KFTV 1 C1 2 partially fragmented pieces; active spermatogenesis 6.2 Testis Testis 0000473 815 573 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990257 392747 0.92686 0.992006 0.738102 33795 1 76 0.00285686 223 0 9.61574e+07 0.0728025 813535 9.69323e+07 7.20627e+06 33860 4.78714e+07 0 0.188758 0.992006 0.732202 9.61574e+07 0.00303573 1.98201e+07 1.31760e+07 2.00955e+07 227 2.01412e+07 1.57792e+07 0.00294614 1.99246e+07 49.7297 0.00839282 0.993756 0 50.3451 GTEX-18465-1626-SM-7LG6N 1 C1 2 pieces; large [4 mm] vein in 1 piece; 4 x 0.7 mm fibrous area in other piece 6 Liver Liver 0001114 818 571 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977892 555016 0.968548 0.983647 0.788074 21614 1 76 0.00352784 198 0 8.15845e+07 0.0313269 2.35372e+06 8.29408e+07 1.27708e+07 21632 4.03867e+07 0 0.180474 0.983647 0.775187 8.15845e+07 0.00525772 1.7572e+07 2.84697e+07 1.7409e+07 243 1.7742e+07 9.17979e+06 0.00438772 1.7637e+07 49.8516 0.0283783 0.989402 0 49.767 GTEX-18465-1826-SM-731BB 0 C1 2 pieces; <5% stromal content 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 822 568 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988878 147157 0.971967 0.990637 0.7607 23272 1 76 0.00300522 127 0 6.24859e+07 0.0277409 384106 6.30765e+07 2.95352e+06 23298 3.107e+07 0 0.211267 0.990637 0.753578 6.24859e+07 0.00344184 1.37531e+07 5.39123e+06 1.38212e+07 144 1.38551e+07 9.45737e+06 0.00322314 1.38233e+07 49.9424 0.00608953 0.992395 0 50.1236 GTEX-18465-2026-SM-718AP 1 C1 2 pieces; adipose tissue with no mammary ducts; <5% fibrous content 6.2 Breast Breast - Mammary Tissue 0008367 825 566 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965941 294917 0.970977 0.978544 0.755567 25448 1 76 0.00252427 374 0 1.10437e+08 0.0287151 724572 1.12858e+08 6.1928e+06 25496 5.42151e+07 0 0.21541 0.978544 0.739356 1.10437e+08 0.00530564 2.40053e+07 1.24368e+07 2.39077e+07 341 2.47102e+07 1.53205e+07 0.00389704 2.45512e+07 49.8387 0.00642021 0.991148 0 49.8982 GTEX-18465-2726-SM-7LT9I 2 C1 6 pieces; fibrous submucosa up to 0.5 mm thick; 10-20% fibrous content. 5.9 Colon Colon - Sigmoid 0001159 843 552 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988937 159416 0.96755 0.991164 0.793704 23688 1 76 0.0027495 201 0 7.67594e+07 0.0322021 1.40082e+06 7.74437e+07 8.70362e+06 23710 3.81486e+07 0 0.173847 0.991164 0.786691 7.67594e+07 0.00371744 1.65578e+07 7.71794e+06 1.671e+07 224 1.67705e+07 1.05896e+07 0.00323238 1.66579e+07 49.8317 0.0180882 0.993391 0 50.2289 GTEX-18465-2826-SM-7LT9J 0 C1 6 pieces; trimmed but up to 10% fat still remain 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 845 551 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.987649 927624 0.945375 0.990034 0.732975 25604 1 76 0.00270754 280 0 9.84743e+07 0.0543607 859098 9.94656e+07 1.09599e+07 25650 4.89294e+07 0 0.2124 0.990034 0.72567 9.84743e+07 0.00400378 2.10564e+07 3.90326e+07 2.1252e+07 273 2.13559e+07 1.35568e+07 0.0033541 2.11871e+07 49.8016 0.00863714 0.992419 0 50.2311 GTEX-18465-2926-SM-7KFSE 2 C1 4 pieces 7.3 Brain Brain - Cerebellum 0002037 848 549 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.987192 2.11743e+06 0.914048 0.99026 0.684947 26973 1 76 0.00311387 375 0 1.62564e+08 0.0855124 2.13608e+06 1.64163e+08 1.35001e+07 27034 8.07282e+07 0 0.229101 0.99026 0.678276 1.62564e+08 0.00317784 3.34913e+07 8.71263e+07 3.44497e+07 386 3.45931e+07 1.81998e+07 0.00314576 3.38584e+07 49.4633 0.013012 0.993327 0 50.7053 GTEX-18465-3026-SM-7LG6Y 2 C1 4 pieces 6.8 Brain Brain - Cortex 0001870 851 546 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98323 658206 0.967334 0.988292 0.846994 24434 1 76 0.00327732 271 0 1.08183e+08 0.0321923 4.4625e+06 1.09464e+08 1.52125e+07 24454 5.36124e+07 0 0.120339 0.988292 0.837077 1.08183e+08 0.00494611 2.36676e+07 2.19747e+07 2.36691e+07 307 2.39586e+07 1.46127e+07 0.00410744 2.38568e+07 49.8935 0.0407667 0.993354 0 50.0015 GTEX-18465-3126-SM-72D75 2 C1 1 piece; all anterior lobe, no neurohypophysis in this cut 6.8 Pituitary Pituitary 0000007 852 545 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.99198 331476 0.942646 0.993906 0.72997 24995 1 76 0.00247062 123 0 6.27852e+07 0.0571131 342336 6.31701e+07 4.38091e+06 25035 3.12666e+07 0 0.212676 0.993906 0.725522 6.27852e+07 0.00351474 1.32041e+07 1.6657e+07 1.33426e+07 140 1.33568e+07 8.36051e+06 0.00299167 1.33092e+07 49.9107 0.00541927 0.995832 0 50.2609 GTEX-18A66-0002-SM-DINAV C1 Blood Whole Blood 0013756 349 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18A66-0002-SM-DLIP1 C1 Blood Whole Blood 0013756 349 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18A66-0005-SM-7SB6U C1 9.2 Blood Whole Blood 0013756 349 BP-51758 RNA isolation_PAXgene Blood RNA (Manual) 04/22/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989115 1.34741e+06 0.941863 0.991183 0.724314 20595 1 76 0.00278805 134 0 8.70261e+07 0.057565 252632 8.78002e+07 9.52773e+06 20618 4.33156e+07 0 0.217549 0.991183 0.717927 8.70261e+07 0.00432276 1.89226e+07 7.90509e+07 1.91564e+07 149 1.92059e+07 1.7456e+07 0.00355381 1.90649e+07 49.8158 0.00287735 0.99325 0 50.307 GTEX-18A66-0008-SM-EAZBU C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 282 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993572 561644 0.980171 0.99449 0.864478 20483 1 76 0.00171927 303 0 1.13294e+08 0.0194968 190196 1.13921e+08 8.97817e+06 20500 5.64864e+07 0 0.115693 0.99449 0.859714 1.13294e+08 0.00254902 2.55373e+07 1.496e+07 2.56238e+07 288 2.56647e+07 3.06539e+07 0.00213376 2.55981e+07 49.9351 0.00166954 0.995408 0 50.0845 GTEX-18A66-0126-SM-731CQ 0 C1 2 pieces, minimal interstitial fat 8 Muscle Muscle - Skeletal 0011907 279 424 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991411 246664 0.983824 0.993217 0.878834 18952 1 76 0.0026654 150 0 6.93056e+07 0.0159366 979204 6.97789e+07 3.22337e+06 18957 3.44912e+07 0 0.10499 0.993217 0.872874 6.93056e+07 0.00309684 1.49524e+07 5.55378e+06 1.507e+07 164 1.50988e+07 1.43377e+07 0.00288072 1.50327e+07 49.8902 0.014033 0.995024 0 50.1958 GTEX-18A66-0226-SM-718BD 0 C1 6 pieces, no significant dermal fat; squamous epithelium is ~45-50 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 281 422 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.969311 354358 0.974267 0.98199 0.817069 25629 1 76 0.00247038 407 0 1.15075e+08 0.0254221 464879 1.17186e+08 5.24733e+06 25669 5.66279e+07 0 0.157198 0.98199 0.802354 1.15075e+08 0.00538298 2.48937e+07 1.1559e+07 2.48512e+07 344 2.55777e+07 2.21670e+07 0.00390787 2.5608e+07 50.0296 0.00396703 0.994669 0 49.9573 GTEX-18A66-0326-SM-718BE 0 C1 2 pieces, fascia/skeletal muscle is ~30 % of specimen, delineated (rep) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 283 421 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.969217 263188 0.976641 0.981725 0.82028 23914 1 76 0.00237899 217 0 1.00434e+08 0.0230259 373423 1.02304e+08 4.72256e+06 23946 4.94205e+07 0 0.156361 0.981725 0.805289 1.00434e+08 0.00519979 2.17877e+07 9.47982e+06 2.17321e+07 251 2.23658e+07 1.97354e+07 0.00377142 2.23924e+07 50.0297 0.00365014 0.994232 0 49.9362 GTEX-18A66-0426-SM-718BF 0 C1 2 pieces, minimal adherent fat 6.8 Nerve Nerve - Tibial 0001323 288 416 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.972752 308967 0.966501 0.983148 0.749206 26362 1 76 0.00251382 296 0 1.15222e+08 0.0331712 412721 1.17197e+08 5.50550e+06 26418 5.68041e+07 0 0.217295 0.983148 0.736581 1.15222e+08 0.00508397 2.51281e+07 1.05465e+07 2.50775e+07 328 2.56815e+07 1.88039e+07 0.00378531 2.57056e+07 50.0234 0.00352161 0.993544 0 49.9496 GTEX-18A66-0526-SM-7LG5O 0 C1 2 pieces, no adherent fat, no significant atherosis 7.9 Blood Vessel Artery - Tibial 0007610 290 415 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.984759 394425 0.976335 0.989273 0.859467 21663 1 76 0.0033177 214 0 9.09445e+07 0.0231599 407740 9.19306e+07 1.26938e+07 21679 4.51026e+07 0 0.116868 0.989273 0.850247 9.09445e+07 0.00487353 1.91756e+07 7.77921e+06 1.94677e+07 236 1.96394e+07 2.02223e+07 0.00409206 1.93814e+07 49.6694 0.0044353 0.993786 0 50.3779 GTEX-18A66-0626-SM-7LT8Z 0 C1 6 pieces, no significant adherent dermal fat; squamous epithelium is ~50-60 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 292 413 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990452 375727 0.973089 0.992907 0.832568 25194 1 76 0.0026834 296 0 1.06387e+08 0.0266154 1.01045e+06 1.07147e+08 1.09678e+07 25222 5.29337e+07 0 0.14052 0.992907 0.826663 1.06387e+08 0.00383055 2.34186e+07 1.4979e+07 2.35811e+07 281 2.36952e+07 2.01022e+07 0.00325556 2.35534e+07 49.8499 0.0094305 0.995362 0 50.1729 GTEX-18A66-0726-SM-72D77 1 C1 2 pieces, spermatogenesis present; appears reduced 6.7 Testis Testis 0000473 320 386 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991381 249577 0.926932 0.99314 0.718166 31009 1 76 0.00251559 111 0 5.25221e+07 0.0727614 410356 5.28849e+07 3.78303e+06 31048 2.61636e+07 0 0.208766 0.99314 0.713239 5.25221e+07 0.00336967 1.08369e+07 9.60531e+06 1.08933e+07 102 1.09322e+07 8.77311e+06 0.00294187 1.0879e+07 49.878 0.00775942 0.9949 0 50.1299 GTEX-18A66-0826-SM-72D5Z 1 C1 2 pieces, no abnormalities 7.2 Thyroid Thyroid 0002046 337 370 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992791 175077 0.966971 0.993869 0.783137 23451 1 76 0.00266984 137 0 6.94584e+07 0.032719 132769 6.98869e+07 4.02852e+06 23478 3.45886e+07 0 0.183834 0.993869 0.778335 6.94584e+07 0.00327478 1.52039e+07 7.77892e+06 1.52586e+07 149 1.52827e+07 1.2704e+07 0.00297198 1.5257e+07 49.9579 0.00189977 0.994947 0 50.0898 GTEX-18A66-0926-SM-718BG 1 C1 2 pieces, minimal congestion 9.1 Lung Lung 0008952 339 368 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.969917 345183 0.979566 0.982559 0.835578 24517 1 76 0.00236682 209 0 1.02013e+08 0.0200839 164091 1.03824e+08 4.34189e+06 24549 5.02074e+07 0 0.143988 0.982559 0.821005 1.02013e+08 0.00502689 2.25862e+07 8.19959e+06 2.25752e+07 253 2.32774e+07 2.27232e+07 0.00367974 2.31893e+07 49.9051 0.00158048 0.995201 0 49.9878 GTEX-18A66-1026-SM-731B8 1 C1 2 pieces ~50-60% occluive focally calcified (del0.ineated) atherosis 7.6 Blood Vessel Artery - Coronary 0001621 353 367 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990432 156978 0.977575 0.992301 0.855707 21239 1 76 0.00282499 141 0 6.41015e+07 0.0219954 138038 6.45989e+07 3.03793e+06 21250 3.1885e+07 0 0.121868 0.992301 0.849119 6.41015e+07 0.00335351 1.39026e+07 4.57038e+06 1.39815e+07 147 1.39907e+07 1.41605e+07 0.00308875 1.40097e+07 50.034 0.00213685 0.994172 0 50.1414 GTEX-18A66-1126-SM-731C5 1 C1 2 pieces, no abnormalities 8.3 Heart Heart - Atrial Appendage 0006631 355 366 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.992085 229185 0.977447 0.993874 0.840677 22640 1 76 0.00287408 162 0 7.9666e+07 0.0221815 833475 8.0157e+07 3.77517e+06 22662 3.96605e+07 0 0.13677 0.993874 0.835527 7.9666e+07 0.00311626 1.73177e+07 6.37431e+06 1.75208e+07 189 1.7537e+07 1.50632e+07 0.00299495 1.74242e+07 49.8387 0.010398 0.995664 0 50.2915 GTEX-18A66-1226-SM-7LT8G 1 C1 2 pieces, ~40% involved by subacute infarction , rep delineated 8.8 Heart Heart - Left Ventricle 0006566 357 364 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991968 283376 0.980001 0.994249 0.856717 23401 1 76 0.00242824 276 0 1.08226e+08 0.0196248 706958 1.08852e+08 1.05892e+07 23419 5.38575e+07 0 0.123283 0.994249 0.85179 1.08226e+08 0.00383864 2.38223e+07 9.30826e+06 2.40659e+07 272 2.41976e+07 2.47776e+07 0.00313182 2.39203e+07 49.7118 0.00649466 0.996529 0 50.2543 GTEX-18A66-1326-SM-7LG4M 1 C1 6 pieces, atherosis up to ~0.5mm 7.5 Blood Vessel Artery - Aorta 0001496 358 364 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.984538 170014 0.975654 0.989578 0.815615 21913 1 76 0.00342086 138 0 6.74212e+07 0.0239263 142452 6.81313e+07 9.56876e+06 21930 3.34274e+07 0 0.160039 0.989578 0.807115 6.74212e+07 0.00531371 1.43656e+07 5.59012e+06 1.4572e+07 141 1.47015e+07 1.3148e+07 0.00436247 1.4553e+07 49.7462 0.00209085 0.994619 0 50.3565 GTEX-18A66-1426-SM-7KFRT 1 C1 6 pieces, squamous mucosa is ~0.5mm, ~20-25% total thickness 8.9 Esophagus Esophagus - Mucosa 0006920 359 363 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989584 407716 0.977203 0.992417 0.83882 22845 1 76 0.00304836 175 0 8.3788e+07 0.0224275 211641 8.44282e+07 6.53252e+06 22861 4.16465e+07 0 0.138383 0.992417 0.832459 8.3788e+07 0.00303633 1.87254e+07 1.09853e+07 1.89605e+07 189 1.90490e+07 1.78584e+07 0.00304237 1.88745e+07 49.7698 0.00250676 0.99525 0 50.3119 GTEX-18A66-1526-SM-72D6Y 1 C1 6 pieces, confirmed target muscularis 7.4 Esophagus Esophagus - Muscularis 0004648 360 363 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992698 142330 0.974843 0.994157 0.833145 22508 1 76 0.00260785 171 0 8.0946e+07 0.0248894 326717 8.14218e+07 4.49377e+06 22529 4.03028e+07 0 0.141698 0.994157 0.828277 8.0946e+07 0.00345594 1.7534e+07 6.00195e+06 1.76169e+07 196 1.76042e+07 1.45721e+07 0.00303128 1.76594e+07 50.0782 0.00401265 0.995616 0 50.118 GTEX-18A66-1626-SM-7LTAF 1 C1 6 pieces, confirmed target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 362 361 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991227 460312 0.976345 0.993546 0.849919 23300 1 76 0.00255372 283 0 1.0514e+08 0.0233058 488800 1.05823e+08 1.10182e+07 23320 5.22843e+07 0 0.126426 0.993546 0.844434 1.0514e+08 0.0038091 2.26174e+07 9.2095e+06 2.27299e+07 277 2.28722e+07 2.07963e+07 0.00317995 2.27003e+07 49.8114 0.00461905 0.995866 0 50.1241 GTEX-18A66-1726-SM-7LG5N 1 C1 2 pieces, ifibroadipose elements only 7 Breast Breast - Mammary Tissue 0008367 363 361 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682,LCSET-7011 04/01/2015 TruSeq.v1 RNASEQ 0.985767 210302 0.977169 0.988799 0.834508 22559 1 76 0.00540868 217 0 8.21051e+07 0.0225209 816566 8.30352e+07 1.51883e+07 22584 4.0794e+07 0 0.142661 0.988799 0.825161 8.21051e+07 0.00360704 1.74449e+07 1.0677e+07 1.83117e+07 219 1.83904e+07 1.58331e+07 0.00451062 1.75982e+07 48.8993 0.00983397 0.991831 0 51.2121 GTEX-18A66-1826-SM-7KFSU 1 C1 2 pieces, no abnormalities 6.8 Spleen Spleen 0002106 364 361 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989777 251518 0.964061 0.990816 0.781465 24129 1 76 0.00390286 168 0 8.55945e+07 0.0338272 199758 8.63878e+07 6.20567e+06 24164 4.25172e+07 0 0.182596 0.990816 0.774288 8.55945e+07 0.003975 1.88462e+07 1.4973e+07 1.91121e+07 191 1.91197e+07 1.3914e+07 0.00393889 1.89335e+07 49.7553 0.00231234 0.991855 0 50.3502 GTEX-18A66-1926-SM-7LTAG 1 C1 2 pieces, ~5-10% fascia/vascular elements, rep delineated 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 366 370 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991007 487878 0.974111 0.99353 0.82873 23479 1 76 0.00264614 280 0 1.06852e+08 0.025563 717245 1.07548e+08 1.12617e+07 23509 5.31383e+07 0 0.145381 0.99353 0.823368 1.06852e+08 0.00379343 2.32758e+07 1.50646e+07 2.34926e+07 291 2.36344e+07 2.07897e+07 0.00321833 2.3387e+07 49.737 0.0066691 0.996053 0 50.2317 GTEX-18A66-2026-SM-7189C 1 C1 2 pieces, mild passive congestion 7.3 Liver Liver 0001114 368 369 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967311 365522 0.975293 0.981258 0.84074 22815 1 76 0.00247196 372 0 1.17878e+08 0.0228851 1.18725e+06 1.20129e+08 5.48273e+06 22840 5.78307e+07 0 0.134552 0.981258 0.824983 1.17878e+08 0.00545428 2.49933e+07 1.82869e+07 2.50061e+07 347 2.57829e+07 2.3166e+07 0.00394192 2.57649e+07 49.9826 0.00988309 0.995206 0 50.0128 GTEX-18A66-2126-SM-7189D 1 C1 2 pieces, Islets well preserved, rep encircled 6 Pancreas Pancreas 0001150 370 367 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.960728 305994 0.97381 0.977546 0.819416 23920 1 76 0.00251489 139 0 1.03122e+08 0.0259537 199280 1.0549e+08 5.1044e+06 23957 5.04991e+07 0 0.154394 0.977546 0.801017 1.03122e+08 0.00598738 2.31576e+07 2.01517e+07 2.31917e+07 161 2.41158e+07 2.71662e+07 0.00422127 2.40391e+07 49.9203 0.00188909 0.994364 0 50.0368 GTEX-18A66-2226-SM-7189E 1 C1 6 pieces, mucosa well-preserved, up to ~1mm, ~30-40% thickness 6.8 Stomach Stomach 0000945 371 367 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.951984 269235 0.981312 0.966499 0.843436 24072 1 76 0.00238277 385 0 1.07911e+08 0.0182318 365127 1.11652e+08 4.88835e+06 24097 5.29954e+07 0 0.137876 0.966499 0.81518 1.07911e+08 0.00566394 2.45694e+07 1.13951e+08 2.46938e+07 294 2.56421e+07 3.05076e+07 0.00399872 2.52948e+07 49.659 0.00327023 0.981014 0 50.1262 GTEX-18A66-2326-SM-7LT8Q 1 C1 2 pieces, ~80% prostatic stroma 5.8 Prostate Prostate 0002367 376 363 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988065 214371 0.9591 0.991257 0.730964 26576 1 76 0.00291039 275 0 1.04721e+08 0.0406741 823203 1.05645e+08 1.16868e+07 26626 5.2035e+07 0 0.228136 0.991257 0.724573 1.04721e+08 0.00386993 2.24775e+07 1.09762e+07 2.27039e+07 268 2.27987e+07 1.40614e+07 0.00338862 2.26946e+07 49.8856 0.0077922 0.994448 0 50.2506 GTEX-18A66-2426-SM-7KFSQ 1 C1 6 pieces, mucoa well preserved, up to ~0.5mm, ~15-20% thickness 8.2 Colon Colon - Transverse 0001157 377 362 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990545 236207 0.97471 0.9921 0.838119 24135 1 76 0.00340051 206 0 8.46954e+07 0.0233731 462434 8.53698e+07 6.18816e+06 24163 4.20722e+07 0 0.136591 0.9921 0.831498 8.46954e+07 0.00359615 1.86722e+07 8.83539e+06 1.89363e+07 208 1.89307e+07 1.55603e+07 0.00349817 1.88053e+07 49.8339 0.00541683 0.993655 0 50.351 GTEX-18A66-2526-SM-7KFTZ 2 C1 4 pieces, lymphoid aggregates are ~30% total tissue, rep delineated 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 380 361 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989947 233498 0.966522 0.991152 0.787283 25520 1 76 0.00351676 206 0 8.77855e+07 0.0324426 509823 8.85692e+07 6.65705e+06 25556 4.36647e+07 0 0.179239 0.991152 0.780317 8.77855e+07 0.00325145 1.92214e+07 1.04581e+07 1.95343e+07 238 1.94924e+07 1.22384e+07 0.00338427 1.93612e+07 49.8312 0.00575621 0.992356 0 50.4036 GTEX-18A66-2626-SM-72D67 1 C1 6 pieces, confirmed target muscularis 8.1 Colon Colon - Sigmoid 0001159 383 366 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.992616 112941 0.975261 0.994404 0.834992 21460 1 76 0.00228077 127 0 5.38869e+07 0.0244439 273483 5.41902e+07 3.61754e+06 21475 2.68503e+07 0 0.140269 0.994404 0.83032 5.38869e+07 0.0033353 1.16561e+07 4.43399e+06 1.17464e+07 127 1.17325e+07 1.01499e+07 0.00280708 1.17595e+07 50.0575 0.00504673 0.996193 0 50.193 GTEX-18A67-0003-SM-DINAR B1 Blood Whole Blood 0013756 -75 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18A67-0003-SM-DJWXP B1 Blood Whole Blood 0013756 -75 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18A67-0006-SM-7SB6T B1 9.2 Blood Whole Blood 0013756 -75 BP-51758 RNA isolation_PAXgene Blood RNA (Manual) 04/22/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989119 654702 0.951531 0.991757 0.751598 20948 1 76 0.0028596 143 0 8.69283e+07 0.0480949 316576 8.76508e+07 9.66313e+06 20982 4.32166e+07 0 0.199933 0.991757 0.745403 8.69283e+07 0.00465036 1.90153e+07 4.28703e+07 1.92e+07 156 1.92723e+07 1.6988e+07 0.0037526 1.91723e+07 49.8699 0.00361179 0.994395 0 50.2417 GTEX-18A67-0008-SM-EAZBP B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 274 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993379 554435 0.978421 0.994322 0.864989 21033 1 76 0.00174325 293 0 1.2423e+08 0.0212306 269479 1.2494e+08 9.8266e+06 21053 6.19381e+07 0 0.113432 0.994322 0.860078 1.2423e+08 0.00274659 2.78028e+07 1.81887e+07 2.80192e+07 320 2.80348e+07 3.3619e+07 0.00224444 2.7902e+07 49.8812 0.00215687 0.995266 0 50.1938 GTEX-18A67-0126-SM-7LG5P 0 B1 6 pieces; 10% to 20% internal/external fat; ~44 micron thick epidermis 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 277 572 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978768 432022 0.97041 0.984434 0.797624 24997 1 76 0.00358757 295 0 9.67507e+07 0.0293352 453197 9.82806e+07 1.53132e+07 25032 4.79246e+07 0 0.172787 0.984434 0.785208 9.67507e+07 0.0051587 2.08383e+07 1.14391e+07 2.11042e+07 262 2.13735e+07 1.72587e+07 0.00436861 2.10839e+07 49.6589 0.00461126 0.9901 0 50.3169 GTEX-18A67-0226-SM-7LG67 1 B1 2 pieces; mature adipose tissue with scant fibrovascular component and nerves 8 Adipose Tissue Adipose - Subcutaneous 0002190 279 570 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978417 543128 0.97676 0.986036 0.835179 23306 1 76 0.00346909 220 0 9.10478e+07 0.0228932 490848 9.23372e+07 1.36926e+07 23328 4.50079e+07 0 0.141581 0.986036 0.823517 9.10478e+07 0.00559855 1.97874e+07 9.56446e+06 2.00662e+07 238 2.04403e+07 1.80866e+07 0.00452559 2.00704e+07 49.5435 0.00531582 0.993655 0 50.3498 GTEX-18A67-0326-SM-7LG5X 0 B1 2 pieces; ~5% of internal fat (outlined) 8.5 Muscle Muscle - Skeletal 0011907 284 565 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983157 567969 0.983187 0.989021 0.877111 20888 1 76 0.00319237 279 0 1.09458e+08 0.0164994 1.97425e+06 1.10673e+08 1.59333e+07 20897 5.42356e+07 0 0.106076 0.989021 0.867482 1.09458e+08 0.00523513 2.31878e+07 1.58765e+07 2.32092e+07 270 2.35195e+07 2.39056e+07 0.0042077 2.34481e+07 49.924 0.0178386 0.994884 0 50.0231 GTEX-18A67-0526-SM-7LT9X 1 B1 2 pieces; atherosclerotic plaque (arrow)with 75% luminal compromise 6.7 Blood Vessel Artery - Tibial 0007610 303 546 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98745 211499 0.974984 0.99071 0.836163 21765 1 76 0.00271251 119 0 5.75429e+07 0.0246232 368237 5.80825e+07 6.30446e+06 21776 2.85697e+07 0 0.138822 0.99071 0.828395 5.75429e+07 0.00369299 1.24864e+07 5.05349e+06 1.25448e+07 130 1.26567e+07 1.12674e+07 0.00320114 1.25498e+07 49.7878 0.0063399 0.993972 0 50.1168 GTEX-18A67-0626-SM-7KFSL 1 B1 2 pieces; attached ~15% skeletal muscle (outlined) and one piece with attached squamous mucosa and submucosa (arrows) 7.7 Salivary Gland Minor Salivary Gland 0006330 306 543 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.99126 283668 0.973223 0.992841 0.803637 24879 1 76 0.00326803 194 0 8.65148e+07 0.025783 207520 8.71387e+07 6.91811e+06 24910 4.30127e+07 0 0.169586 0.992841 0.797883 8.65148e+07 0.00318798 1.90534e+07 7.83427e+06 1.93662e+07 203 1.93828e+07 1.5328e+07 0.00322807 1.91734e+07 49.7285 0.00238149 0.994421 0 50.4072 GTEX-18A67-0826-SM-7KFTI 1 B1 2 pieces; two small collections of lymphocytes (rep. outlined) 7.2 Thyroid Thyroid 0002046 316 533 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.989881 294603 0.966054 0.991687 0.783635 25517 1 76 0.00315171 211 0 9.23072e+07 0.0330008 263782 9.3081e+07 6.85852e+06 25556 4.59023e+07 0 0.182419 0.991687 0.777121 9.23072e+07 0.00344358 2.01013e+07 1.01312e+07 2.03701e+07 227 2.03738e+07 1.5668e+07 0.00329738 2.02581e+07 49.8576 0.0028339 0.993493 0 50.3321 GTEX-18A67-0926-SM-7LG5Y 1 B1 6 pieces; intimal edema 7.5 Blood Vessel Artery - Aorta 0001496 322 527 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.982868 423825 0.973401 0.98819 0.826927 22890 1 76 0.0034211 212 0 8.89884e+07 0.0261705 251221 9.00519e+07 1.30115e+07 22913 4.40974e+07 0 0.146474 0.98819 0.817161 8.89884e+07 0.00531435 1.91371e+07 8.1425e+06 1.93756e+07 227 1.96044e+07 1.73765e+07 0.00436263 1.93499e+07 49.6734 0.00278974 0.993512 0 50.3095 GTEX-18A67-1026-SM-731CE 1 B1 2 pieces; one with ~15% internal fat (arrows) and other with ~30% external fat (outlined) 8.3 Heart Heart - Atrial Appendage 0006631 329 520 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.992033 211277 0.977168 0.993885 0.842321 22834 1 76 0.00287972 159 0 7.5334e+07 0.0224716 939158 7.57975e+07 3.37207e+06 22851 3.75032e+07 0 0.134847 0.993885 0.83717 7.5334e+07 0.00319454 1.6432e+07 5.98626e+06 1.66574e+07 181 1.66401e+07 1.35263e+07 0.00303683 1.65716e+07 49.8967 0.0123904 0.995737 0 50.3406 GTEX-18A67-1126-SM-7KFSB 1 B1 2 pieces; thick fibrotic septa (rep. double arrow) and thick-walled vessels (arrows); atelectasis alternating with dilated alveolar spaces (likely secondary to ventilator); congestion and hemosiderinophages 8.5 Lung Lung 0008952 337 512 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991476 203366 0.973166 0.993742 0.821448 23981 1 76 0.00297164 141 0 6.81934e+07 0.0264386 267185 6.86229e+07 5.14533e+06 23999 3.39156e+07 0 0.151717 0.993742 0.816308 6.81934e+07 0.00307465 1.50358e+07 5.32689e+06 1.52313e+07 157 1.52425e+07 1.2799e+07 0.00302303 1.51747e+07 49.8886 0.00389353 0.996007 0 50.3229 GTEX-18A67-1226-SM-7KFRS 0 B1 2 pieces; fatty tissue around the capillaries (outlined) 5% content 8.6 Heart Heart - Left Ventricle 0006566 344 505 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.9938 326195 0.981842 0.995244 0.876585 21352 1 76 0.00275087 267 0 9.52321e+07 0.0178559 2.87303e+06 9.56872e+07 6.82336e+06 21363 4.74176e+07 0 0.105257 0.995244 0.872416 9.52321e+07 0.00305021 2.08804e+07 9.961e+06 2.11052e+07 315 2.10412e+07 1.68908e+07 0.00290033 2.10559e+07 50.0175 0.0300252 0.996689 0 50.2677 GTEX-18A67-1326-SM-7LT8V 0 B1 2 pieces; lobulated mature adipose tissue with scant fibrovascular component, nerves and muscle fibers 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 347 502 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988002 235108 0.974933 0.991952 0.830662 23365 1 76 0.00264131 208 0 8.26071e+07 0.0248056 492675 8.32773e+07 9.21220e+06 23384 4.10438e+07 0 0.144271 0.991952 0.823977 8.26071e+07 0.00391652 1.80477e+07 8.10578e+06 1.82136e+07 245 1.83226e+07 1.43379e+07 0.00327637 1.82434e+07 49.8918 0.00591608 0.995902 0 50.2287 GTEX-18A67-1426-SM-718BC 1 B1 2 pieces; 0.6 up to ~2mm attached fat; atherosclerotic plaque with 50% and 75% luminal compromise and small calcification (outlined) 7.5 Blood Vessel Artery - Coronary 0001621 364 485 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.962716 447278 0.971337 0.978355 0.829337 25407 1 76 0.00241834 274 0 1.03725e+08 0.0282703 480707 1.0602e+08 4.95341e+06 25436 5.08445e+07 0 0.142 0.978355 0.811386 1.03725e+08 0.00559467 2.21214e+07 8.42646e+06 2.21131e+07 260 2.29182e+07 1.99865e+07 0.00398112 2.2876e+07 49.9539 0.00453413 0.993995 0 49.9907 GTEX-18A67-1526-SM-7LG6F 1 B1 2 pieces; moderate congestion 7.6 Spleen Spleen 0002106 368 481 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.970868 641641 0.961912 0.978837 0.766797 25765 1 76 0.0041312 208 0 1.0188e+08 0.0368765 423600 1.04082e+08 1.66945e+07 25810 5.0285e+07 0 0.195115 0.978837 0.75057 1.0188e+08 0.00599166 2.21618e+07 1.90153e+07 2.23937e+07 250 2.28428e+07 1.64606e+07 0.00505386 2.24882e+07 49.6089 0.00406985 0.986806 0 50.2603 GTEX-18A67-1626-SM-7LT9T 1 B1 6 pieces; one piece well trimmed, other pieces contain from 5% to 40% subcutaneous fat (outlined) 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 375 474 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98976 371881 0.972889 0.992298 0.817595 22868 1 76 0.00278019 192 0 7.45511e+07 0.0268941 442594 7.51298e+07 8.4014e+06 22888 3.70561e+07 0 0.155295 0.992298 0.811298 7.45511e+07 0.00380103 1.6262e+07 8.83071e+06 1.63709e+07 176 1.64737e+07 1.32628e+07 0.0032893 1.63403e+07 49.7966 0.00589106 0.994836 0 50.1668 GTEX-18A67-1726-SM-7KFT9 1 B1 2 pieces; large [2.4mm] and smaller foci of pancreatic necrosis surrounded by a rim of leucocytes: acute pancreatitis (outlined and arrowed) ; ~20% internal fat; prominent Langerhans islets and some hyalinized (rep. outlined) 7.5 Pancreas Pancreas 0001150 372 477 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991515 173081 0.978984 0.993654 0.863686 22409 1 76 0.00290209 143 0 8.73505e+07 0.0208392 193881 8.79084e+07 6.68205e+06 22430 4.34684e+07 0 0.115298 0.993654 0.858205 8.73505e+07 0.00303414 1.98584e+07 1.43926e+07 2.00789e+07 159 2.01521e+07 2.39069e+07 0.00296798 1.99807e+07 49.7865 0.00220549 0.995793 0 50.2761 GTEX-18A67-1826-SM-7KFT7 1 B1 2 pieces; decreased spermatogenesis; interstitial fibrosis with tubular atrophy and sclerosis with interstitial proliferation of Leydig cells (arrows) 6.5 Testis Testis 0000473 374 475 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990307 290903 0.953373 0.992539 0.75561 31202 1 76 0.00315574 165 0 8.55694e+07 0.0463747 1.06921e+06 8.62126e+07 6.77706e+06 31259 4.25646e+07 0 0.197763 0.992539 0.749972 8.55694e+07 0.00303476 1.8359e+07 9.73134e+06 1.86696e+07 197 1.86923e+07 1.29277e+07 0.00309539 1.85162e+07 49.7634 0.0124021 0.994771 0 50.4195 GTEX-18A67-2126-SM-7LT9Y 1 B1 6 pieces; well trimmed target muscularis 8.1 Esophagus Esophagus - Muscularis 0004648 400 449 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.992211 376283 0.97466 0.994036 0.839722 22712 1 76 0.00262956 281 0 9.72515e+07 0.0250079 1.25122e+06 9.7835e+07 1.00255e+07 22734 4.83992e+07 0 0.134937 0.994036 0.834715 9.72515e+07 0.00356252 2.10712e+07 8.95144e+06 2.12104e+07 268 2.13044e+07 1.73961e+07 0.00309518 2.11384e+07 49.8044 0.0127891 0.995862 0 50.1646 GTEX-18A67-2226-SM-7LT9Z 1 B1 6 pieces; well trimmed target muscularis 7.4 Colon Colon - Sigmoid 0001159 397 452 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990138 560626 0.970349 0.992226 0.813479 23799 1 76 0.00272095 213 0 8.7692e+07 0.0293793 887183 8.8379e+07 9.26810e+06 23824 4.35693e+07 0 0.156869 0.992226 0.807155 8.7692e+07 0.00398117 1.90529e+07 1.00721e+07 1.91149e+07 251 1.93229e+07 1.43716e+07 0.00334974 1.90089e+07 49.5904 0.0100384 0.994313 0 50.0812 GTEX-18A67-2426-SM-7LT95 1 B1 6 pieces; target squamous mucosa and prominent muscularis mucosae 9.7 Esophagus Esophagus - Mucosa 0006920 406 443 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991108 263271 0.97692 0.993249 0.841338 23112 1 76 0.00270688 213 0 9.22801e+07 0.0227058 372502 9.29073e+07 9.62976e+06 23131 4.59269e+07 0 0.135582 0.993249 0.835658 9.22801e+07 0.00360777 2.06269e+07 1.19528e+07 2.08052e+07 251 2.08979e+07 1.97975e+07 0.00315636 2.07251e+07 49.7924 0.00400939 0.995391 0 50.2152 GTEX-18A67-2526-SM-7LG5Z 1 B1 6 pieces; target muscularis and up to 1.6mm loose connective tissue 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 417 432 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.982493 299652 0.972769 0.987844 0.820782 22682 1 76 0.00340692 137 0 7.27341e+07 0.0269519 955465 7.36291e+07 1.00866e+07 22706 3.60472e+07 0 0.151987 0.987844 0.810804 7.27341e+07 0.00558101 1.57212e+07 7.83591e+06 1.58538e+07 164 1.60015e+07 1.24673e+07 0.00448808 1.59284e+07 49.8855 0.0129767 0.993195 0 50.2101 GTEX-18A67-2626-SM-718AD 1 B1 6 pieces; gastric mucosa but no muscularis; fresh hemorrhage in the lamina propria of the superficial part of mucosa; microcystic deep glandular changes 7.3 Stomach Stomach 0000945 415 434 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.964224 258965 0.975924 0.978805 0.816147 24588 1 76 0.00243615 266 0 9.84403e+07 0.0236947 241633 1.00572e+08 4.68085e+06 24626 4.83289e+07 0 0.159777 0.978805 0.798849 9.84403e+07 0.00556629 2.19588e+07 3.54151e+07 2.19426e+07 233 2.27361e+07 2.11967e+07 0.0039779 2.26359e+07 49.8896 0.00240259 0.993387 0 49.9815 GTEX-18A67-5004-SM-AN451 B1 Muscle Muscle - Skeletal 0011907 287 ChIP-Seq GTEX-18A6Q-0003-SM-DINAS C1 Blood Whole Blood 0013756 390 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18A6Q-0003-SM-DJWXQ C1 Blood Whole Blood 0013756 390 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18A6Q-0005-SM-9KNVX C1 9.2 Blood Whole Blood 0013756 390 BP-51758 RNA isolation_PAXgene Blood RNA (Manual) 04/22/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.986811 619689 0.965493 0.98802 0.735086 21050 1 76 0.00271174 134 0 8.9734e+07 0.0339779 197526 9.08221e+07 1.03254e+07 21080 4.4684e+07 0 0.230407 0.98802 0.72628 8.9734e+07 0.00386623 2.0159e+07 6.18804e+07 2.02917e+07 155 2.03174e+07 1.76694e+07 0.00328828 2.02646e+07 49.935 0.00217487 0.989229 0 50.164 GTEX-18A6Q-0008-SM-EAZBO C1 6.7 Skin Cells - Cultured fibroblasts EFO_0002009 528 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992648 580153 0.981621 0.993652 0.867793 20415 1 76 0.0016845 292 0 1.11938e+08 0.0180461 160736 1.12653e+08 8.54227e+06 20433 5.57945e+07 0 0.113828 0.993652 0.862284 1.11938e+08 0.00260716 2.532e+07 1.21175e+07 2.53842e+07 286 2.54258e+07 3.02242e+07 0.00214536 2.5392e+07 49.9667 0.00142683 0.994656 0 50.0633 GTEX-18A6Q-0011-R10b-SM-72D7A C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 403 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.99332 276632 0.964953 0.994576 0.847258 23592 1 76 0.00265511 270 0 8.35641e+07 0.0345923 2.28699e+06 8.40198e+07 4.89524e+06 23606 4.16265e+07 0 0.117695 0.994576 0.842662 8.35641e+07 0.0031014 1.83079e+07 9.44528e+06 1.84896e+07 266 1.84991e+07 1.13164e+07 0.00287798 1.83912e+07 49.8538 0.0272197 0.995832 0 50.2469 GTEX-18A6Q-0011-R11a-SM-72D6H C1, A1 6.2 Brain Brain - Cerebellar Hemisphere 0002037 403 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6122 11/06/2014 TruSeq.v1 RNASEQ 0.9943 309929 0.953963 0.995037 0.786895 24142 1 76 0.00252584 374 0 1.09067e+08 0.0456963 2.14364e+06 1.09611e+08 5.67161e+06 24175 5.43722e+07 0 0.167068 0.995037 0.78299 1.09067e+08 0.0031289 2.36683e+07 1.34542e+07 2.39107e+07 332 2.3856e+07 1.2579e+07 0.00282715 2.37928e+07 49.9337 0.0195568 0.995774 0 50.2547 GTEX-18A6Q-0011-R1b-SM-731DI C1, A1 7.3 Brain Brain - Hippocampus 0001954 403 BP-54542 RNA isolation_PAXgene Tissue miRNA 07/01/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.99092 381425 0.958025 0.992815 0.809977 22137 1 76 0.00334986 147 0 5.83581e+07 0.0417201 2.3065e+06 5.87804e+07 6.75123e+06 22153 2.90185e+07 0 0.148047 0.992815 0.804158 5.83581e+07 0.00398524 1.27802e+07 7.32446e+06 1.30152e+07 156 1.2966e+07 6.73976e+06 0.00366694 1.29267e+07 49.9242 0.0392393 0.99471 0 50.4554 GTEX-18A6Q-0011-R3a-SM-718A7 C1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 403 BP-53787 RNA isolation_PAXgene Tissue miRNA 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.96887 570038 0.958411 0.98206 0.82734 24989 1 76 0.00250644 375 0 1.08932e+08 0.0412942 7.60274e+06 1.10921e+08 5.11584e+06 25012 5.35727e+07 0 0.131072 0.98206 0.812497 1.08932e+08 0.00552739 2.35179e+07 2.4483e+07 2.36867e+07 352 2.41629e+07 1.05452e+07 0.00399663 2.43468e+07 50.1896 0.0685416 0.99525 0 50.1788 GTEX-18A6Q-0011-R6a-SM-7LG6R C1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 403 BP-53699 RNA isolation_PAXgene Tissue miRNA 06/10/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983418 1.02797e+06 0.951451 0.988464 0.813152 24868 1 76 0.00342747 272 0 1.04919e+08 0.0482865 8.58354e+06 1.06143e+08 1.4966e+07 24888 5.19971e+07 0 0.138299 0.988464 0.803772 1.04919e+08 0.00538441 2.25884e+07 3.78038e+07 2.24429e+07 300 2.26319e+07 1.08263e+07 0.00440094 2.28666e+07 50.258 0.0808677 0.99351 0 49.8384 GTEX-18A6Q-0126-SM-731BZ 0 C1 6 pieces, squamous epithelium is ~50-60 microns, trace adherent fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 527 652 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990237 311268 0.975419 0.992162 0.835957 24238 1 76 0.00300302 301 0 1.0678e+08 0.0242521 639450 1.07624e+08 5.12036e+06 24264 5.31236e+07 0 0.139462 0.992162 0.829404 1.0678e+08 0.0034779 2.33954e+07 1.08572e+07 2.35183e+07 325 2.35706e+07 1.98153e+07 0.00324 2.35375e+07 49.9649 0.00594153 0.994086 0 50.131 GTEX-18A6Q-0226-SM-718AS 0 C1 2 pieces, ~5% fascia/vascular elements, rep. delineated 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 530 650 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967859 280527 0.976085 0.980939 0.815951 24735 1 76 0.00244465 276 0 9.87112e+07 0.0235841 371916 1.00629e+08 4.81247e+06 24764 4.85175e+07 0 0.160134 0.980939 0.800399 9.87112e+07 0.00529168 2.16057e+07 8.51978e+06 2.15763e+07 261 2.22396e+07 1.77088e+07 0.00384918 2.22169e+07 49.9744 0.0036959 0.994018 0 49.966 GTEX-18A6Q-0326-SM-718AT 0 C1 2 pieces, minimal interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 532 648 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.972671 418219 0.983132 0.984481 0.883747 21440 1 76 0.002223 269 0 1.13453e+08 0.016542 1.28914e+06 1.15242e+08 4.89467e+06 21453 5.59264e+07 0 0.0993852 0.984481 0.870032 1.13453e+08 0.00494853 2.43008e+07 1.17345e+07 2.42924e+07 313 2.49442e+07 2.42871e+07 0.00356942 2.49413e+07 49.997 0.0111864 0.99629 0 49.9913 GTEX-18A6Q-0426-SM-731CC 0 C1 2 pieces, neglibilbe adherent fat 7.9 Nerve Nerve - Tibial 0001323 543 637 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988425 171199 0.96971 0.99034 0.770496 23471 1 76 0.00300042 149 0 6.71418e+07 0.0299194 224351 6.77967e+07 2.98252e+06 23499 3.33929e+07 0 0.199214 0.99034 0.763053 6.71418e+07 0.00343448 1.4813e+07 5.21637e+06 1.48676e+07 149 1.49101e+07 1.12935e+07 0.00321703 1.4892e+07 49.9697 0.00330917 0.992255 0 50.0919 GTEX-18A6Q-0526-SM-7LG4O 0 C1 2 pieces, no adherent fat 8.1 Blood Vessel Artery - Tibial 0007610 544 637 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981798 279403 0.977307 0.988431 0.856792 21877 1 76 0.00332589 210 0 8.96923e+07 0.0222327 390123 9.07421e+07 1.36154e+07 21889 4.43986e+07 0 0.120516 0.988431 0.846879 8.96923e+07 0.00525311 1.88592e+07 7.4413e+06 1.91589e+07 231 1.93758e+07 1.94105e+07 0.00428303 1.91912e+07 49.7607 0.00429925 0.995064 0 50.3942 GTEX-18A6Q-0626-SM-7KFRP 0 C1 6 pieces, squamous epithelium is ~30-40 microns, trace adherent fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 545 636 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.993593 186387 0.976393 0.99458 0.835269 24190 1 76 0.00285357 221 0 8.78299e+07 0.0233189 810438 8.83085e+07 6.43746e+06 24216 4.3746e+07 0 0.141125 0.99458 0.830742 8.78299e+07 0.00281627 1.92419e+07 9.27113e+06 1.95476e+07 247 1.95216e+07 1.6034e+07 0.00283493 1.93546e+07 49.7851 0.00917735 0.995567 0 50.3941 GTEX-18A6Q-0726-SM-7LT8Y 1 C1 2 pieces, few minute (~1mm) colloid cysts 6.6 Thyroid Thyroid 0002046 579 603 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988245 297976 0.96928 0.991686 0.750138 24642 1 76 0.00280566 204 0 8.34522e+07 0.0303765 943785 8.41518e+07 9.22513e+06 24680 4.14588e+07 0 0.219142 0.991686 0.743901 8.34522e+07 0.00402728 1.83333e+07 1.00166e+07 1.8435e+07 212 1.86004e+07 1.23499e+07 0.00341435 1.84366e+07 49.7789 0.0112153 0.995127 0 50.1383 GTEX-18A6Q-0826-SM-7KFRD 1 C1 2 pieces, mild congestion 6.7 Lung Lung 0008952 583 599 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991857 250424 0.969515 0.992983 0.759328 25318 1 76 0.0031691 204 0 8.65541e+07 0.0301233 288569 8.71658e+07 6.9915e+06 25354 4.30721e+07 0 0.210186 0.992983 0.754 8.65541e+07 0.00303697 1.8899e+07 8.67858e+06 1.92127e+07 210 1.91932e+07 1.32691e+07 0.00310311 1.9017e+07 49.7695 0.00331058 0.994109 0 50.4116 GTEX-18A6Q-0926-SM-7LG4N 1 C1 2 pieces, fibroadipose elements, no ductal elements noted 6.8 Breast Breast - Mammary Tissue 0008367 585 597 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980506 242035 0.976042 0.9864 0.79769 24360 1 76 0.00351965 277 0 9.35036e+07 0.0235849 650902 9.47929e+07 1.35817e+07 24397 4.63172e+07 0 0.178353 0.9864 0.786841 9.35036e+07 0.00563388 2.05414e+07 1.20378e+07 2.07215e+07 261 2.09307e+07 1.49595e+07 0.00457045 2.08518e+07 49.9055 0.00686657 0.992292 0 50.2183 GTEX-18A6Q-1026-SM-7LT9S 1 C1 2 pieces minute lymphoid aggregate delineated (~0.5mm) 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 586 597 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98868 496733 0.968259 0.991364 0.743259 26291 1 76 0.0029168 280 0 1.07636e+08 0.0312695 318422 1.08573e+08 1.18212e+07 26345 5.34989e+07 0 0.225 0.991364 0.73684 1.07636e+08 0.003838 2.36156e+07 1.6437e+07 2.38224e+07 268 2.40177e+07 1.79284e+07 0.00337615 2.3698e+07 49.665 0.00293278 0.994047 0 50.218 GTEX-18A6Q-1126-SM-7LG5A 1 C1 6 pieces, confirmed target muscularis 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 592 591 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98027 395063 0.970089 0.986614 0.790739 23980 1 76 0.00363501 164 0 7.99319e+07 0.0296782 969252 8.10164e+07 1.24834e+07 24009 3.95487e+07 0 0.17935 0.986614 0.780154 7.99319e+07 0.0054611 1.71402e+07 9.31245e+06 1.7334e+07 186 1.75628e+07 1.19002e+07 0.00454218 1.73765e+07 49.7334 0.0119637 0.992958 0 50.2811 GTEX-18A6Q-1226-SM-7KFS9 1 C1 6 pieces, squamousmucosa is ~0.3mm, 25-30% thickness; a few submucosal mucus glands present, rep. delineated 7.3 Esophagus Esophagus - Mucosa 0006920 593 591 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992023 264256 0.975343 0.993731 0.805514 23255 1 76 0.00290331 271 0 1.03046e+08 0.0243581 624337 1.03696e+08 7.21301e+06 23278 5.1281e+07 0 0.169829 0.993731 0.800464 1.03046e+08 0.00334343 2.30411e+07 1.24289e+07 2.33017e+07 323 2.33331e+07 1.68334e+07 0.00312299 2.3187e+07 49.843 0.00602085 0.995439 0 50.2812 GTEX-18A6Q-1326-SM-7LG62 1 C1 6 pieces, confirmed target muscularis 6.9 Esophagus Esophagus - Muscularis 0004648 594 590 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.984508 377811 0.971279 0.988376 0.791816 23640 1 76 0.00349074 202 0 8.91053e+07 0.0284635 1.20042e+06 9.01532e+07 1.23158e+07 23672 4.42122e+07 0 0.179463 0.988376 0.782612 8.91053e+07 0.00514546 1.91096e+07 9.04562e+06 1.92786e+07 243 1.94596e+07 1.36581e+07 0.00431487 1.92435e+07 49.7208 0.0133153 0.992244 0 50.2201 GTEX-18A6Q-1426-SM-7LG63 1 C1 6 pieces, atherosis up to ~0.3-0.4mm 7.1 Blood Vessel Artery - Aorta 0001496 595 590 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983157 481749 0.970961 0.987706 0.751875 23751 1 76 0.00368654 141 0 8.34307e+07 0.0286288 189334 8.44691e+07 1.15987e+07 23787 4.13292e+07 0 0.219086 0.987706 0.742631 8.34307e+07 0.00570553 1.79099e+07 8.07102e+06 1.81201e+07 164 1.83758e+07 1.43206e+07 0.00469139 1.80138e+07 49.5027 0.00224146 0.992255 0 50.2917 GTEX-18A6Q-1526-SM-731CO 1 C1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 596 589 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991565 177935 0.981094 0.993426 0.834903 21780 1 76 0.00288125 194 0 7.54514e+07 0.0187233 3.16406e+06 7.59507e+07 3.31754e+06 21801 3.75698e+07 0 0.146191 0.993426 0.829415 7.54514e+07 0.00316083 1.64712e+07 9.16142e+06 1.68372e+07 233 1.68523e+07 9.13866e+06 0.00302078 1.65738e+07 49.5834 0.0416593 0.995288 0 50.5493 GTEX-18A6Q-1626-SM-7KFTA 1 C1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 6.2 Heart Heart - Left Ventricle 0006566 598 587 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991051 182004 0.9818 0.993521 0.852167 22234 1 76 0.00288196 369 0 1.02662e+08 0.0180659 6.5958e+06 1.03332e+08 7.91467e+06 22249 5.10736e+07 0 0.129633 0.993521 0.846647 1.02662e+08 0.00320774 2.25436e+07 2.02882e+07 2.30943e+07 367 2.30661e+07 9.39452e+06 0.00304445 2.27895e+07 49.6985 0.0638313 0.995992 0 50.6033 GTEX-18A6Q-1726-SM-7LT9A 2 C1 2 pieces, Islets vislbie , moderate saponification 6.3 Pancreas Pancreas 0001150 601 585 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989622 312273 0.980892 0.992452 0.851005 20994 1 76 0.00301122 121 0 9.75904e+07 0.0187681 360526 9.83327e+07 1.04005e+07 21009 4.85137e+07 0 0.129888 0.992452 0.844581 9.75904e+07 0.00437161 2.23963e+07 3.65405e+07 2.26151e+07 143 2.26592e+07 3.06795e+07 0.00368948 2.2629e+07 49.9667 0.00366639 0.995282 0 50.243 GTEX-18A6Q-1826-SM-72D6I 2 C1 2 pieces, moderately autolyzed cortex 6.4 Adrenal Gland Adrenal Gland 0002369 603 583 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.992075 328713 0.958616 0.993997 0.749594 22154 1 76 0.00251575 128 0 6.30326e+07 0.0411762 1.82936e+06 6.34133e+07 4.49634e+06 22181 3.13991e+07 0 0.209022 0.993997 0.745095 6.30326e+07 0.00356712 1.35076e+07 1.56337e+07 1.3765e+07 156 1.37575e+07 6.36294e+06 0.00304042 1.36277e+07 49.7629 0.0288482 0.99592 0 50.472 GTEX-18A6Q-2026-SM-718AQ 1 C1 2 pieces, mild congestion 7.1 Liver Liver 0001114 606 581 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968921 342359 0.967331 0.9812 0.774272 22710 1 76 0.00250486 200 0 9.5649e+07 0.0325013 872862 9.74816e+07 4.3414e+06 22744 4.70532e+07 0 0.19306 0.9812 0.759716 9.5649e+07 0.00535721 2.05677e+07 1.41144e+07 2.05917e+07 232 2.1182e+07 1.4531e+07 0.00391319 2.10737e+07 49.8718 0.00895412 0.99348 0 50.0291 GTEX-18A6Q-2226-SM-7LG61 1 C1 6 pieces, confirmed target mucsuclaris 6.5 Colon Colon - Sigmoid 0001159 614 574 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977087 486558 0.965833 0.985099 0.807131 23356 1 76 0.00357336 207 0 8.50662e+07 0.0339326 800415 8.63529e+07 1.32544e+07 23377 4.20201e+07 0 0.158702 0.985099 0.795105 8.50662e+07 0.00563829 1.79378e+07 1.32215e+07 1.81839e+07 209 1.84594e+07 1.36927e+07 0.00459743 1.82858e+07 49.7639 0.00926911 0.993111 0 50.3407 GTEX-18A6Q-2626-SM-7KFT3 2 C1 2 pieces, moderate interstitial atrophy, reduced spermatogenesis 7.1 Testis Testis 0000473 620 570 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991626 309144 0.924153 0.993025 0.713996 33410 1 76 0.00288897 160 0 8.02943e+07 0.0755017 450345 8.08583e+07 5.86652e+06 33471 3.9972e+07 0 0.210157 0.993025 0.709016 8.02943e+07 0.00302022 1.65078e+07 9.9771e+06 1.67107e+07 155 1.67411e+07 1.33533e+07 0.00295451 1.65784e+07 49.7558 0.00556956 0.994424 0 50.3053 GTEX-18A6Q-2826-SM-7LTAO 1 C1 5 pieces, no abnormalities 5.8 Brain Brain - Cerebellum 0002037 670 520 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989736 1.15945e+06 0.929968 0.991892 0.723652 25243 1 76 0.00275515 273 0 1.1088e+08 0.0697132 3.20355e+06 1.11786e+08 1.19719e+07 25285 5.51151e+07 0 0.206316 0.991892 0.717785 1.1088e+08 0.00388755 2.34278e+07 4.71478e+07 2.36572e+07 273 2.37912e+07 1.14599e+07 0.00332012 2.3507e+07 49.6996 0.0286578 0.994049 0 50.2435 GTEX-18A6Q-2926-SM-718AR 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 672 519 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967237 715585 0.954588 0.981189 0.815858 25052 1 76 0.00249488 371 0 9.94327e+07 0.0450536 3.79661e+06 1.01339e+08 4.53356e+06 25077 4.8868e+07 0 0.138731 0.981189 0.800511 9.94327e+07 0.00550506 2.13679e+07 2.47478e+07 2.14942e+07 331 2.2165e+07 1.17239e+07 0.00397857 2.19986e+07 49.8116 0.0374644 0.995142 0 50.1473 GTEX-18A6Q-3026-SM-72D6T 1 C1 1 piece~ 40% neurohypophysis (delineated); rest adenohypophysis 7 Pituitary Pituitary 0000007 672 519 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992324 165203 0.966616 0.993653 0.747243 25529 1 76 0.00274519 158 0 7.7363e+07 0.0330668 893779 7.78571e+07 3.8786e+06 25572 3.85291e+07 0 0.219373 0.993653 0.7425 7.7363e+07 0.00338795 1.69003e+07 6.49414e+06 1.69948e+07 176 1.70342e+07 1.09923e+07 0.00306614 1.69575e+07 49.8872 0.0114797 0.994982 0 50.1394 GTEX-18A7A-0002-SM-6RBLJ C1 Blood Whole Blood 0013756 365 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-5918 09/01/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-18A7A-0002-SM-6UH2A C1 Blood Whole Blood 0013756 365 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-18A7A-0006-SM-7PC1P C1 8.5 Blood Whole Blood 0013756 365 BP-51758 RNA isolation_PAXgene Blood RNA (Manual) 04/22/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.962269 488548 0.97379 0.96654 0.791634 19726 1 76 0.0032449 111 0 8.7038e+07 0.0241791 201278 9.00511e+07 1.45902e+07 19734 4.31052e+07 0 0.182156 0.96654 0.765146 8.7038e+07 0.00568804 2.00656e+07 1.3575e+08 2.01637e+07 134 2.02888e+07 2.175e+07 0.00446107 2.03369e+07 50.0592 0.00223515 0.970812 0 50.1219 GTEX-18A7A-0008-SM-EAZBR C1 8.8 Skin Cells - Cultured fibroblasts EFO_0002009 571 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993067 643798 0.973435 0.994058 0.840826 21851 1 76 0.00164292 293 0 1.23548e+08 0.0262009 348004 1.24286e+08 8.56798e+06 21876 6.15915e+07 0 0.132609 0.994058 0.83583 1.23548e+08 0.00275761 2.75247e+07 2.18014e+07 2.77217e+07 312 2.77348e+07 3.15103e+07 0.00219971 2.76328e+07 49.9079 0.00280002 0.995049 0 50.1783 GTEX-18A7A-0126-SM-731AH 0 C1 6 pieces; well trimmed; up to 10% dermal fat; up to 2 hair follicles per piece 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 467 1300 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989727 249100 0.972007 0.99172 0.779395 23599 1 76 0.00294429 152 0 6.52009e+07 0.0277472 314201 6.57453e+07 2.8905e+06 23626 3.24324e+07 0 0.192612 0.99172 0.772942 6.52009e+07 0.00343394 1.42502e+07 6.39306e+06 1.43269e+07 149 1.43622e+07 1.09097e+07 0.00318862 1.43373e+07 49.9567 0.00477907 0.993713 0 50.1343 GTEX-18A7A-0226-SM-718BH 0 C1 6 pieces; well trimmed; up to 10% dermal fat 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 570 1197 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.970329 298973 0.975436 0.982856 0.823759 25051 1 76 0.00233857 307 0 9.67579e+07 0.0242456 543537 9.84457e+07 4.42259e+06 25080 4.76394e+07 0 0.151677 0.982856 0.809637 9.67579e+07 0.00531843 2.08936e+07 1.01547e+07 2.09037e+07 260 2.15239e+07 1.81674e+07 0.00380951 2.14689e+07 49.936 0.00552119 0.995383 0 50.0121 GTEX-18A7A-0326-SM-731AT 0 C1 2 pieces; <2% fibrous content 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 572 1195 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989987 224797 0.973932 0.991796 0.781802 22775 1 76 0.00288729 136 0 6.36997e+07 0.0257696 278205 6.42265e+07 2.98794e+06 22799 3.16756e+07 0 0.19213 0.991796 0.775389 6.36997e+07 0.00334472 1.40279e+07 5.07328e+06 1.40976e+07 149 1.41283e+07 1.03666e+07 0.00311559 1.41047e+07 49.9582 0.00433162 0.993606 0 50.1238 GTEX-18A7A-0426-SM-731B6 0 C1 2 pieces; thin (0.3 mm) rim of fat coats external aspect 5.6 Nerve Nerve - Tibial 0001323 573 1195 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988466 159062 0.965121 0.990313 0.730579 23530 1 76 0.00298742 133 0 6.14267e+07 0.0346334 301486 6.20276e+07 3.04816e+06 23558 3.05285e+07 0 0.234542 0.990313 0.723502 6.14267e+07 0.00353152 1.34723e+07 5.11407e+06 1.35441e+07 143 1.35659e+07 8.37546e+06 0.00325896 1.35553e+07 49.9806 0.00486051 0.99216 0 50.1328 GTEX-18A7A-0526-SM-718BI 1 C1 2 pieces; no lesions, well trimmed 6.9 Blood Vessel Artery - Tibial 0007610 574 1194 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.9697 255669 0.972256 0.982303 0.837211 22517 1 76 0.00232315 275 0 9.44288e+07 0.0273912 587927 9.613e+07 4.47175e+06 22535 4.64575e+07 0 0.135045 0.982303 0.822395 9.44288e+07 0.0051044 1.99554e+07 7.7429e+06 1.99411e+07 262 2.04565e+07 1.74403e+07 0.00369594 2.05348e+07 50.0956 0.00611595 0.994906 0 49.9821 GTEX-18A7A-0626-SM-718BJ 0 C1 2 pieces; no fat 8.6 Muscle Muscle - Skeletal 0011907 576 1193 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.975574 320669 0.985007 0.985952 0.885553 20207 1 76 0.00204452 269 0 9.25761e+07 0.0147531 861432 9.38951e+07 4.11866e+06 20215 4.5707e+07 0 0.099454 0.985952 0.873113 9.25761e+07 0.00453181 2.02004e+07 9.60917e+06 2.02088e+07 260 2.07242e+07 2.0517e+07 0.00327508 2.06206e+07 49.8747 0.00917441 0.99633 0 50.0104 GTEX-18A7A-0726-SM-7LTAI 1 C1 2 pieces;; ducts & atrophic lobules; 1 piece has 30% fat content, other has 70% fat content 7.8 Breast Breast - Mammary Tissue 0008367 579 1190 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989282 432729 0.974425 0.991899 0.772048 26546 1 76 0.00278109 287 0 1.17897e+08 0.0248573 411519 1.1886e+08 1.27876e+07 26592 5.85947e+07 0 0.202377 0.991899 0.765794 1.17897e+08 0.00400498 2.59385e+07 1.29594e+07 2.60875e+07 287 2.62949e+07 2.158e+07 0.00339142 2.60179e+07 49.7352 0.00346223 0.994516 0 50.1432 GTEX-18A7A-0826-SM-7KFTJ 1 C1 2 pieces; well dissected; no lesions 6.7 Thyroid Thyroid 0002046 583 1187 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.99109 258012 0.968597 0.992818 0.741814 24971 1 76 0.0030047 207 0 9.29728e+07 0.0310989 426643 9.36453e+07 7.31117e+06 25014 4.62694e+07 0 0.226783 0.992818 0.736487 9.29728e+07 0.00290733 2.02966e+07 8.31773e+06 2.05674e+07 236 2.0594e+07 1.41014e+07 0.0029561 2.04271e+07 49.7965 0.00455595 0.994546 0 50.3313 GTEX-18A7A-0926-SM-7LT8H 1 C1 2 pieces; <5% fat content 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 584 1186 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990644 249887 0.975089 0.993124 0.777602 25612 1 76 0.0026123 282 0 1.19636e+08 0.0245712 419166 1.20464e+08 1.24456e+07 25651 5.95204e+07 0 0.197486 0.993124 0.772255 1.19636e+08 0.00366429 2.62328e+07 1.24023e+07 2.64696e+07 291 2.65813e+07 2.05251e+07 0.00313698 2.64019e+07 49.8307 0.00347959 0.995604 0 50.2246 GTEX-18A7A-1026-SM-7LT8B 1 C1 2 pieces; emphysema; foci of pigmented macrophages 7.4 Lung Lung 0008952 588 1183 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.984818 201578 0.973184 0.987542 0.743919 25257 1 76 0.00276175 274 0 1.0905e+08 0.026464 478752 1.10426e+08 1.10566e+07 25305 5.42307e+07 0 0.229264 0.987542 0.734652 1.0905e+08 0.00386078 2.40725e+07 1.0567e+07 2.42369e+07 266 2.43469e+07 1.64052e+07 0.00330975 2.42433e+07 49.8934 0.0043355 0.990267 0 50.1702 GTEX-18A7A-1126-SM-7LT8O 1 C1 2 pieces; no lesions; well trimmed 8 Blood Vessel Artery - Coronary 0001621 592 1179 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991623 258594 0.976168 0.993573 0.819674 23738 1 76 0.00258224 281 0 1.04635e+08 0.0234171 212773 1.05312e+08 1.053e+07 23769 5.20673e+07 0 0.156494 0.993573 0.814406 1.04635e+08 0.00367445 2.26514e+07 8.4226e+06 2.28815e+07 272 2.29758e+07 2.1361e+07 0.00312727 2.27516e+07 49.7549 0.00202041 0.995522 0 50.2526 GTEX-18A7A-1226-SM-7LTAJ 1 C1 2 pieces; 30% fibrofatty internal content 7.8 Heart Heart - Atrial Appendage 0006631 594 1178 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990697 462958 0.981314 0.993407 0.829072 23316 1 76 0.00242174 271 0 1.13142e+08 0.0181727 3.13274e+06 1.13893e+08 1.20809e+07 23338 5.62272e+07 0 0.152242 0.993407 0.823605 1.13142e+08 0.00378411 2.46556e+07 1.74608e+07 2.45921e+07 307 2.4748e+07 1.75999e+07 0.00310106 2.47508e+07 50.0028 0.027506 0.996116 0 49.9355 GTEX-18A7A-1426-SM-731AP 1 C1 6 pieces; small amount of plaque 8.1 Blood Vessel Artery - Aorta 0001496 598 1176 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990987 179205 0.976772 0.992712 0.829765 21197 1 76 0.00289425 143 0 6.83359e+07 0.0227696 139029 6.88376e+07 3.05272e+06 21216 3.39933e+07 0 0.147007 0.992712 0.823718 6.83359e+07 0.00330195 1.47337e+07 4.60722e+06 1.48198e+07 152 1.48514e+07 1.36025e+07 0.00309775 1.48146e+07 49.9379 0.00201967 0.994437 0 50.1456 GTEX-18A7A-1526-SM-72D69 1 C1 2 pieces; <5% macrovesicular steatosis; no obvious iron accumulation [thalassemia history] 6.5 Liver Liver 0001114 602 1172 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992874 190451 0.977664 0.994218 0.79443 21676 1 76 0.00250203 154 0 8.27174e+07 0.0221665 510718 8.31985e+07 4.2914e+06 21704 4.12027e+07 0 0.183234 0.994218 0.789836 8.27174e+07 0.00314614 1.80526e+07 8.75694e+06 1.81542e+07 175 1.82051e+07 1.64708e+07 0.00282365 1.81014e+07 49.8571 0.00613855 0.995562 0 50.1404 GTEX-18A7A-1726-SM-7LT93 1 C1 2 pieces; large ducts comprise 25% of 1 piece 6.4 Pancreas Pancreas 0001150 605 1170 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988748 199436 0.986312 0.991794 0.871408 21196 1 76 0.00246529 147 0 1.07951e+08 0.0133312 221212 1.08844e+08 1.15774e+07 21212 5.36932e+07 0 0.114904 0.991794 0.864257 1.07951e+08 0.00357049 2.52098e+07 4.04002e+07 2.54513e+07 173 2.54755e+07 3.80172e+07 0.00301619 2.55182e+07 50.0418 0.00203238 0.99484 0 50.2384 GTEX-18A7A-1826-SM-7KFTU 1 C1 2 fragmented pieces; some foci are moderately autolyzed; 1 piece has 20% external fat 6.8 Adrenal Gland Adrenal Gland 0002369 607 1169 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988105 275728 0.975464 0.990987 0.793895 23473 1 76 0.00291704 270 0 8.75638e+07 0.0242358 1.96466e+06 8.83602e+07 6.68482e+06 23499 4.35241e+07 0 0.181569 0.990987 0.78674 8.75638e+07 0.00314738 1.90147e+07 9.6495e+06 1.94017e+07 256 1.94435e+07 1.22028e+07 0.00303187 1.92103e+07 49.6984 0.0222347 0.993869 0 50.5037 GTEX-18A7A-2226-SM-7LT8K 2 C1 6 pieces; mucosa largely autolyzed; muscularis intact 6.4 Colon Colon - Transverse 0001157 619 1159 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.99024 773850 0.968443 0.992821 0.762535 29803 1 76 0.00269793 406 0 3.39979e+08 0.0312569 3.26287e+06 3.42438e+08 3.60395e+07 29917 1.69052e+08 0 0.205908 0.992821 0.757061 3.39979e+08 0.00392105 7.34672e+07 3.54174e+07 7.39266e+07 370 7.4265e+07 4.96671e+07 0.0033079 7.39278e+07 49.8862 0.00952836 0.995403 0 50.1558 GTEX-18A7A-2326-SM-7KFRH 1 C1 6 pieces; chronic inflammation; partially sloughed epithelium; focus of carry-over debris on deep surface of 1 piece [annotated] 8.6 Esophagus Esophagus - Mucosa 0006920 620 1158 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992396 314482 0.977553 0.994001 0.811586 22564 1 76 0.00312618 165 0 8.1438e+07 0.0221944 391548 8.19295e+07 6.51457e+06 22577 4.05375e+07 0 0.165967 0.994001 0.806718 8.1438e+07 0.00297321 1.82873e+07 9.07052e+06 1.85005e+07 193 1.85317e+07 1.47697e+07 0.00304982 1.83894e+07 49.8073 0.00477908 0.995607 0 50.2898 GTEX-18A7A-2526-SM-7LG6I 1 C1 6 pieces; well dissected muscle 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 622 1157 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98246 560024 0.973887 0.987743 0.805787 23584 1 76 0.00332943 211 0 9.48411e+07 0.0258155 632868 9.6018e+07 1.37479e+07 23619 4.69809e+07 0 0.1681 0.987743 0.79591 9.48411e+07 0.00546376 2.01088e+07 9.2212e+06 2.02556e+07 249 2.05311e+07 1.7296e+07 0.00439089 2.02906e+07 49.7053 0.00659114 0.993026 0 50.1818 GTEX-18A7A-2626-SM-7LG6L 1 C1 2 pieces; small corpora albicantia 7.2 Ovary Ovary 0000992 624 1156 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976089 665656 0.962347 0.982017 0.758777 24945 1 76 0.00346873 219 0 9.75839e+07 0.0373517 126870 9.93709e+07 1.47022e+07 24993 4.83e+07 0 0.20357 0.982017 0.745132 9.75839e+07 0.00559877 2.1046e+07 1.51612e+07 2.13395e+07 225 2.17103e+07 1.92184e+07 0.00452732 2.12291e+07 49.4397 0.00127673 0.987945 0 50.3462 GTEX-18A7A-2726-SM-7LG6U 2 C1 6 pieces; mucosa autolysis=2; muscle =1 7.3 Stomach Stomach 0000945 625 1155 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.955831 727153 0.969948 0.963481 0.846478 22159 1 76 0.00298538 397 0 9.12136e+07 0.0294638 743782 9.46708e+07 1.34182e+07 22168 4.50549e+07 0 0.12347 0.963481 0.815566 9.12136e+07 0.00531612 2.07585e+07 1.58885e+08 2.10091e+07 287 2.1333e+07 2.75036e+07 0.00414149 2.11436e+07 49.7771 0.00785651 0.971131 0 50.3001 GTEX-18A7A-2826-SM-7LT8J 1 C1 6 pieces; mild focal chronic inflammation; partial superficial sloughing of epithelium 7.6 Vagina Vagina 0000996 626 1155 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990188 133463 0.970846 0.992401 0.738835 23782 1 76 0.00280977 118 0 6.28001e+07 0.0288786 201215 6.3281e+07 6.73353e+06 23808 3.12278e+07 0 0.23201 0.992401 0.733221 6.28001e+07 0.00393436 1.38662e+07 6.33755e+06 1.39868e+07 132 1.40395e+07 9.88568e+06 0.00337081 1.39493e+07 49.8388 0.00317971 0.994613 0 50.2165 GTEX-18A7B-0004-SM-DINCC B1 Blood Whole Blood 0013756 533 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18A7B-0004-SM-DJWXU B1 Blood Whole Blood 0013756 533 BP-51919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2014 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18A7B-0005-SM-7PC1D B1 8.8 Blood Whole Blood 0013756 533 BP-51758 RNA isolation_PAXgene Blood RNA (Manual) 04/22/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.952545 558289 0.977302 0.955762 0.787681 17315 1 76 0.00316602 133 0 1.1115e+08 0.0209803 328018 1.16295e+08 1.64833e+07 17321 5.51433e+07 0 0.189621 0.955762 0.752836 1.1115e+08 0.00531384 2.63507e+07 1.9194e+08 2.61709e+07 170 2.63236e+07 3.02517e+07 0.00423632 2.65926e+07 50.2542 0.00282057 0.95898 0 49.8289 GTEX-18A7B-0008-SM-EAZBQ B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 666 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993634 639137 0.978068 0.994496 0.858677 20994 1 76 0.00171537 299 0 1.24575e+08 0.0215965 382985 1.25264e+08 9.21156e+06 21014 6.21123e+07 0 0.119391 0.994496 0.853951 1.24575e+08 0.00252798 2.80715e+07 1.81664e+07 2.81927e+07 310 2.8222e+07 3.32086e+07 0.00212132 2.81499e+07 49.936 0.00305742 0.995359 0 50.1077 GTEX-18A7B-0126-SM-7LG64 1 B1 6 fragmented pieces; 1 mm subcutaneous fat on 3 of 6 pieces 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 668 608 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.987977 514861 0.96978 0.990614 0.768166 24822 1 76 0.00339511 192 0 8.76103e+07 0.0300065 488511 8.84404e+07 1.1069e+07 24861 4.35112e+07 0 0.201614 0.990614 0.760956 8.76103e+07 0.00496514 1.90803e+07 1.07052e+07 1.92319e+07 190 1.94377e+07 1.50692e+07 0.00417804 1.90939e+07 49.5538 0.00552362 0.993251 0 50.1978 GTEX-18A7B-0326-SM-7LG65 1 B1 2 pieces, 1 with 20% internal fat; scattered atrophy 8 Muscle Muscle - Skeletal 0011907 675 601 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.98693 516471 0.98336 0.990698 0.869983 21443 1 76 0.00315364 278 0 9.85225e+07 0.0163578 905911 9.94476e+07 1.31369e+07 21459 4.89101e+07 0 0.113377 0.990698 0.861891 9.85225e+07 0.0049205 2.12416e+07 1.25572e+07 2.12711e+07 267 2.14963e+07 2.17738e+07 0.00403371 2.13517e+07 49.8312 0.00910943 0.994465 0 50.0347 GTEX-18A7B-0426-SM-7LG4T 2 B1 2 pieces; moderate atrophy; 20% internal fat in 1 piece 6.6 Nerve Nerve - Tibial 0001323 680 596 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.973508 308972 0.97599 0.981615 0.834285 23791 1 76 0.00359888 243 0 9.23479e+07 0.0235454 251801 9.40775e+07 1.46489e+07 23814 4.56034e+07 0 0.141704 0.981615 0.818947 9.23479e+07 0.00554037 2.01875e+07 1.03672e+07 2.04388e+07 223 2.07755e+07 1.90441e+07 0.0045616 2.05779e+07 49.7612 0.00267653 0.989721 0 50.3092 GTEX-18A7B-0526-SM-7LG68 2 B1 2 pieces; medial calcific sclerosis in both; large atherosclerotic plaque in one; fibrofatty external deposits up to 2.4 mm on each 5.8 Blood Vessel Artery - Tibial 0007610 684 592 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.970301 347896 0.972846 0.977853 0.830925 23175 1 76 0.00353062 209 0 9.17856e+07 0.0265433 419169 9.38644e+07 1.38484e+07 23199 4.53149e+07 0 0.141921 0.977853 0.812523 9.17856e+07 0.006048 1.95268e+07 1.37786e+07 1.97529e+07 206 2.00734e+07 1.90502e+07 0.00477959 1.98642e+07 49.7381 0.00446569 0.985405 0 50.2878 GTEX-18A7B-0926-SM-7189F 1 B1 2 pieces; eccentric sclerotic plaques; 1 piece is longitudinally cut, other is a cross section 5.7 Blood Vessel Artery - Coronary 0001621 734 542 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966989 268288 0.974436 0.978788 0.859304 24068 1 76 0.00236082 383 0 1.1991e+08 0.0252009 453523 1.22509e+08 6.73904e+06 24098 5.89661e+07 0 0.115132 0.978788 0.841077 1.1991e+08 0.00511696 2.55453e+07 1.5424e+07 2.55257e+07 349 2.61133e+07 2.53295e+07 0.00372228 2.6288e+07 50.1668 0.00370197 0.990588 0 49.9808 GTEX-18A7B-1226-SM-718AU 1 B1 2 pieces; 10% & 5 % fibrous content 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 755 521 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.969578 254146 0.973843 0.980219 0.757531 25471 1 76 0.00261456 376 0 1.1655e+08 0.0258426 1.06617e+06 1.18902e+08 5.87282e+06 25524 5.73777e+07 0 0.216312 0.980219 0.742546 1.1655e+08 0.00527561 2.54145e+07 1.4278e+07 2.54177e+07 344 2.60812e+07 1.75359e+07 0.00393064 2.59579e+07 49.8815 0.00896681 0.990861 0 50.0032 GTEX-18A7B-1526-SM-7KFTH 2 B1 2 pieces; reduced spermatic maturation; parenchymal sclerosis occupies 30 & 10% 6.5 Testis Testis 0000473 768 508 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.988618 213346 0.931037 0.990669 0.737008 33690 1 76 0.00297504 216 0 9.18687e+07 0.0685993 655662 9.27341e+07 7.77306e+06 33757 4.57176e+07 0 0.194029 0.990669 0.73013 9.18687e+07 0.00266701 1.90373e+07 1.17041e+07 1.92493e+07 227 1.93151e+07 1.58063e+07 0.00282135 1.9144e+07 49.7775 0.00707034 0.992719 0 50.2769 GTEX-18A7B-2026-SM-72D71 2 B1 6 pieces; extensive glandular autolysis except for foci of moderate autolysis; muscle intact 5.8 Colon Colon - Transverse 0001157 797 479 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990609 137351 0.972164 0.991579 0.826024 23830 1 76 0.00284571 212 0 8.48867e+07 0.0270009 744261 8.56076e+07 5.14212e+06 23852 4.22154e+07 0 0.14614 0.991579 0.819068 8.48867e+07 0.00350566 1.8463e+07 7.62189e+06 1.8547e+07 219 1.85744e+07 1.39081e+07 0.00317536 1.85204e+07 49.9271 0.00869387 0.99255 0 50.1135 GTEX-18A7B-2626-SM-7LG55 1 B1 2 pieces; adipose tissue with 10% fibrovascular content in 1 piece; no mammary ducts 6.1 Breast Breast - Mammary Tissue 0008367 820 456 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981569 413583 0.972269 0.986716 0.783624 23885 1 76 0.00367174 211 0 8.96762e+07 0.0274364 621478 9.08835e+07 1.32876e+07 23914 4.44363e+07 0 0.188645 0.986716 0.773215 8.96762e+07 0.00537454 1.94883e+07 1.29625e+07 1.97346e+07 211 1.996e+07 1.49734e+07 0.0045187 1.96904e+07 49.66 0.00683818 0.991864 0 50.314 GTEX-18A7B-2726-SM-7LG56 1 B1 6 pieces; well trimmed; 10% dermal fat content 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 819 457 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.978118 448820 0.971579 0.985306 0.783166 25684 1 76 0.00359069 283 0 9.86469e+07 0.0281267 519119 1.00118e+08 1.50685e+07 25727 4.87872e+07 0 0.188413 0.985306 0.771658 9.86469e+07 0.00555506 2.15661e+07 1.53121e+07 2.18205e+07 257 2.21752e+07 1.73664e+07 0.00456571 2.18856e+07 49.6714 0.00518507 0.992494 0 50.2932 GTEX-18A7B-2826-SM-7KFTK 1 B1 2 pieces; well dissected, moderately atrophic glands with 20% internal fat 8.9 Salivary Gland Minor Salivary Gland 0006330 821 455 BP-53009 RNA Extraction from Paxgene-derived Lysate Plate Based 05/20/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990054 174622 0.97519 0.991809 0.817491 23871 1 76 0.00359126 206 0 8.4564e+07 0.0221468 200441 8.52624e+07 6.65108e+06 23896 4.19739e+07 0 0.157699 0.991809 0.810795 8.4564e+07 0.00366423 1.90665e+07 1.65763e+07 1.93426e+07 209 1.93831e+07 1.5259e+07 0.00362768 1.91762e+07 49.7317 0.00235087 0.993563 0 50.3593 GTEX-18D9A-0005-SM-7SB7H C1 8.6 Blood Whole Blood 0013756 501 BP-52113 RNA isolation_PAXgene Blood RNA (Manual) 04/28/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.985243 524806 0.958683 0.987899 0.721358 20613 1 76 0.00271627 111 0 7.29108e+07 0.0408937 234135 7.38039e+07 7.49354e+06 20639 3.62627e+07 0 0.237325 0.987899 0.712628 7.29108e+07 0.00460956 1.62956e+07 5.63506e+07 1.64725e+07 125 1.65508e+07 1.42341e+07 0.00366037 1.64172e+07 49.7974 0.00317239 0.990554 0 50.2699 GTEX-18D9A-0126-SM-7KFSI 0 C1 2 pieces; no lesions 6.8 Thyroid Thyroid 0002046 476 1118 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990367 250333 0.963765 0.99219 0.762297 23948 1 76 0.00298923 165 0 8.14852e+07 0.035981 339028 8.21267e+07 6.84977e+06 23978 4.05462e+07 0 0.201468 0.99219 0.756343 8.14852e+07 0.00285041 1.76788e+07 8.46286e+06 1.79919e+07 199 1.79978e+07 1.18778e+07 0.00291995 1.78184e+07 49.7496 0.00412811 0.994012 0 50.4388 GTEX-18D9A-0126-SM-DLL4R 0 C1 2 pieces; no lesions Thyroid Thyroid 0002046 476 1118 BP-53093 DNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-10443 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18D9A-0126-SM-DMZ2W 0 C1 2 pieces; no lesions Thyroid Thyroid 0002046 476 1118 BP-53093 DNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18D9A-0226-SM-7KFSJ 1 C1 2 pieces; some bronchi have pigmented macrophages 8.2 Lung Lung 0008952 479 1115 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991874 402911 0.974706 0.993665 0.8203 25815 1 76 0.00309319 380 0 1.33315e+08 0.0248469 634113 1.34165e+08 1.06903e+07 25860 6.63339e+07 0 0.154406 0.993665 0.815103 1.33315e+08 0.00302745 2.93974e+07 1.25439e+07 2.99088e+07 369 2.98946e+07 2.47189e+07 0.00306038 2.96494e+07 49.7941 0.00472636 0.995455 0 50.4311 GTEX-18D9A-0326-SM-7LT8L 1 C1 6 pieces; well trimmed muscle except for 20% fibrous submucosa on 2 pieces 8.2 Esophagus Esophagus - Muscularis 0004648 481 1114 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990508 240085 0.974436 0.993362 0.838596 22500 1 76 0.00246106 217 0 9.49187e+07 0.0252341 662864 9.5553e+07 1.03143e+07 22522 4.72209e+07 0 0.13584 0.993362 0.83303 9.49187e+07 0.00333439 2.04984e+07 1.10464e+07 2.06589e+07 251 2.0742e+07 1.73243e+07 0.00289647 2.06612e+07 49.9025 0.00693714 0.996217 0 50.1951 GTEX-18D9A-0426-SM-72D55 1 C1 6 pieces; well trimmed muscle 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 482 1113 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993008 145515 0.97608 0.994273 0.847775 21776 1 76 0.00241445 178 0 7.94004e+07 0.0236013 471633 7.98578e+07 3.94872e+06 21793 3.95549e+07 0 0.128305 0.994273 0.842919 7.94004e+07 0.00318585 1.73375e+07 6.82334e+06 1.74802e+07 199 1.74501e+07 1.51e+07 0.00279966 1.74644e+07 50.0205 0.00590591 0.995537 0 50.2049 GTEX-18D9A-0526-SM-7KFSW 1 C1 6 pieces; basal epithelial hyperplasia (?reflux); superficial epithelial sloughing 9.7 Esophagus Esophagus - Mucosa 0006920 484 1112 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992374 220335 0.979501 0.99349 0.852828 21879 1 76 0.00312066 215 0 9.12492e+07 0.0199846 432335 9.18471e+07 7.2236e+06 21893 4.54296e+07 0 0.126673 0.99349 0.847276 9.12492e+07 0.00290681 2.04387e+07 1.30002e+07 2.07382e+07 230 2.06926e+07 1.9467e+07 0.00301385 2.05886e+07 49.874 0.00470712 0.994606 0 50.3636 GTEX-18D9A-0626-SM-7KFTY 1 C1 6 pieces; superficial mucosal autolysis & sloughing 7.2 Stomach Stomach 0000945 485 1111 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990598 208405 0.976875 0.992082 0.841211 24121 1 76 0.00285706 406 0 1.06404e+08 0.022493 1.23335e+06 1.07253e+08 7.80023e+06 24145 5.29642e+07 0 0.135664 0.992082 0.83455 1.06404e+08 0.00269512 2.39241e+07 4.15496e+07 2.42297e+07 341 2.41998e+07 2.05041e+07 0.00277621 2.41004e+07 49.8971 0.0114994 0.993566 0 50.3173 GTEX-18D9A-0726-SM-7LTA7 1 C1 2 pieces; 5% fibrovascular content 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 486 1112 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988422 442985 0.976811 0.991806 0.838795 23647 1 76 0.00248192 277 0 1.01194e+08 0.0228834 1.6088e+06 1.0203e+08 1.10095e+07 23673 5.0259e+07 0 0.138016 0.991806 0.831922 1.01194e+08 0.00383439 2.23184e+07 1.34486e+07 2.23604e+07 315 2.25589e+07 1.58344e+07 0.00315585 2.2428e+07 49.8546 0.0157679 0.995189 0 50.047 GTEX-18D9A-0826-SM-718C1 1 C1 2 pieces; ova & corpora in various stages 7.3 Ovary Ovary 0000992 489 1110 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.980653 376846 0.962756 0.987693 0.730172 25583 1 76 0.00232809 284 0 1.20484e+08 0.0369242 236421 1.21986e+08 5.14193e+06 25651 5.96254e+07 0 0.232584 0.987693 0.721186 1.20484e+08 0.00420525 2.62385e+07 1.37975e+07 2.62602e+07 299 2.671e+07 2.13762e+07 0.00325998 2.66239e+07 49.9193 0.00193811 0.994734 0 50.0207 GTEX-18D9A-1026-SM-7KFRU 1 C1 6 pieces; focal epithelial sloughing 8.1 Vagina Vagina 0000996 493 1107 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990898 368525 0.974038 0.993141 0.796824 24270 1 76 0.00295544 202 0 9.09618e+07 0.0257099 185989 9.159e+07 6.59721e+06 24299 4.52456e+07 0 0.177214 0.993141 0.791358 9.09618e+07 0.00282268 2.00984e+07 1.02076e+07 2.03351e+07 206 2.03889e+07 1.76754e+07 0.00288921 2.02479e+07 49.8265 0.00203067 0.995383 0 50.2927 GTEX-18D9A-1126-SM-7KFRJ 2 C1 6 pieces; epithelial autolysis varies from 1 to 2 7.7 Colon Colon - Transverse 0001157 495 1105 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.990325 383022 0.974053 0.99229 0.819118 24545 1 76 0.00287258 278 0 9.64534e+07 0.0246224 1.27242e+06 9.72029e+07 6.75811e+06 24579 4.79244e+07 0 0.154936 0.99229 0.812802 9.64534e+07 0.00353557 2.13876e+07 1.13036e+07 2.16398e+07 326 2.16245e+07 1.48058e+07 0.00320342 2.15758e+07 49.9436 0.0130903 0.994255 0 50.293 GTEX-18D9A-1326-SM-7LT8P 1 C1 6 pieces; mucosa occupies 10% to 20% of 4 of 6 pieces [labeled] 7.8 Colon Colon - Sigmoid 0001159 500 1101 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.991009 324411 0.973768 0.993387 0.834746 23265 1 76 0.00247759 286 0 1.06741e+08 0.0259341 625682 1.07452e+08 1.13879e+07 23291 5.31051e+07 0 0.139022 0.993387 0.829226 1.06741e+08 0.00368881 2.31321e+07 1.21925e+07 2.33318e+07 300 2.34098e+07 1.93419e+07 0.00308175 2.32877e+07 49.8693 0.00582291 0.995765 0 50.2149 GTEX-18D9A-1426-SM-7LT8M 1 C1 6 pieces; up to 4 hair follicles on each piece; 5% dermal fat content 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 502 1100 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683,LCSET-7084 04/23/2015 TruSeq.v1 RNASEQ 0.993198 348735 0.971525 0.99459 0.801116 25664 1 76 0.00204679 295 0 1.34347e+08 0.0282351 880746 1.35078e+08 7.54588e+06 25713 6.6919e+07 0 0.17041 0.99459 0.796782 1.34347e+08 0.00278463 2.96102e+07 1.5122e+07 2.97262e+07 325 2.97582e+07 2.19416e+07 0.00241519 2.97506e+07 49.9936 0.00652029 0.995982 0 50.0978 GTEX-18D9A-1526-SM-7LG4J 0 C1 2 pieces; ductal and lobular units present; fat occupies 80% 7.3 Breast Breast - Mammary Tissue 0008367 504 1098 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.981423 341448 0.974799 0.986908 0.822939 23540 1 76 0.00315245 278 0 1.01467e+08 0.0249025 786407 1.02813e+08 1.34563e+07 23568 5.02833e+07 0 0.151861 0.986908 0.812165 1.01467e+08 0.00556726 2.20934e+07 1.44029e+07 2.21844e+07 303 2.23648e+07 1.68411e+07 0.00435315 2.24267e+07 50.0691 0.00764893 0.992393 0 50.1028 GTEX-18D9A-1626-SM-7LG5Q 0 C1 1 piece; no lesions; well trimmed 8 Blood Vessel Artery - Tibial 0007610 606 997 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.983532 371770 0.979274 0.988936 0.875575 21469 1 76 0.00310383 221 0 9.33766e+07 0.0202261 447281 9.44213e+07 1.27707e+07 21481 4.62617e+07 0 0.103699 0.988936 0.865887 9.33766e+07 0.00520726 2.00977e+07 9.59061e+06 2.02478e+07 243 2.0478e+07 2.19236e+07 0.0041498 2.03354e+07 49.8252 0.00473708 0.994339 0 50.1861 GTEX-18D9A-1726-SM-731BS 0 C1 2 pieces; well trimmed 7.1 Nerve Nerve - Tibial 0001323 607 996 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.98956 248605 0.968803 0.991188 0.769752 23839 1 76 0.00299541 173 0 8.10611e+07 0.0308963 211392 8.17818e+07 4.27719e+06 23867 4.02959e+07 0 0.199051 0.991188 0.76297 8.10611e+07 0.00343015 1.78464e+07 6.97728e+06 1.79176e+07 183 1.79505e+07 1.3489e+07 0.00321243 1.79391e+07 49.9841 0.00258483 0.992816 0 50.0996 GTEX-18D9A-1826-SM-718BK 0 C1 2 pieces; minimal internal fat content 8.4 Muscle Muscle - Skeletal 0011907 609 995 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.973862 357154 0.982941 0.984688 0.886407 21628 1 76 0.00212933 385 0 1.10439e+08 0.0168243 1.22746e+06 1.12156e+08 5.00383e+06 21636 5.44975e+07 0 0.0965337 0.984688 0.872834 1.10439e+08 0.00464347 2.40991e+07 1.45327e+07 2.41714e+07 338 2.47959e+07 2.18449e+07 0.00337258 2.46203e+07 49.8223 0.0109442 0.995514 0 50.0748 GTEX-18D9A-1926-SM-7LG6P 1 C1 6 pieces; minimal dermal fat content 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 611 993 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.987744 386271 0.973986 0.991269 0.833338 23544 1 76 0.00315276 323 0 1.08788e+08 0.025703 511290 1.09746e+08 1.35587e+07 23570 5.40364e+07 0 0.140648 0.991269 0.826062 1.08788e+08 0.00490516 2.34715e+07 1.56588e+07 2.36069e+07 274 2.37651e+07 2.07569e+07 0.00402585 2.36687e+07 49.8983 0.00465886 0.994793 0 50.1439 GTEX-18D9A-2026-SM-718BL 1 C1 2 pieces; 10% fibrous content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 613 992 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965877 326435 0.971099 0.979417 0.78808 25121 1 76 0.00240646 378 0 1.12713e+08 0.0285693 685722 1.15082e+08 5.61346e+06 25170 5.53498e+07 0 0.183018 0.979417 0.771859 1.12713e+08 0.00542349 2.45703e+07 1.13917e+07 2.44674e+07 347 2.52707e+07 1.88654e+07 0.00389412 2.5256e+07 49.9855 0.00595857 0.992957 0 49.895 GTEX-18D9B-0004-SM-DINCD B1 Blood Whole Blood 0013756 -95 BP-52080 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/28/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18D9B-0005-SM-7PBYL B1 8.1 Blood Whole Blood 0013756 -95 BP-52113 RNA isolation_PAXgene Blood RNA (Manual) 04/28/2014 LCSET-6761,LCSET-7211 05/15/2015 TruSeq.v1 RNASEQ 0.982833 277262 0.973716 0.983758 0.813954 15641 1 76 0.00214771 83 0 5.90224e+07 0.0255659 115307 5.99969e+07 4.3772e+06 15644 2.94292e+07 0 0.159762 0.983758 0.800734 5.90224e+07 0.00327496 1.37559e+07 7.90522e+07 1.38433e+07 102 1.38385e+07 1.55241e+07 0.00271081 1.38243e+07 49.9744 0.00192188 0.984682 0 50.1583 GTEX-18D9B-0008-SM-EAZBT B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 422 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.990805 839278 0.978427 0.993136 0.862015 22445 1 76 0.00171022 404 0 2.12509e+08 0.0212312 372073 2.13978e+08 1.71751e+07 22476 1.05819e+08 0 0.116413 0.993136 0.856098 2.12509e+08 0.00277944 4.76975e+07 3.14516e+07 4.79637e+07 353 4.81303e+07 5.7394e+07 0.00224358 4.79926e+07 49.9284 0.00173884 0.995467 0 50.1391 GTEX-18D9B-0226-SM-731CV 1 B1 2 pieces; untrimmed nerve with 60% external fat 6.2 Nerve Nerve - Tibial 0001323 405 487 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988764 111510 0.977345 0.990474 0.820663 21779 1 76 0.00288858 149 0 6.2217e+07 0.02235 336311 6.28154e+07 3.25737e+06 21800 3.09376e+07 0 0.156682 0.990474 0.812845 6.2217e+07 0.00333747 1.37427e+07 4.87402e+06 1.38058e+07 153 1.38263e+07 1.08287e+07 0.00311264 1.38235e+07 49.995 0.00535395 0.992183 0 50.1145 GTEX-18D9B-0326-SM-731B2 1 B1 2 pieces; well trimmed artery with focal atheromatous plaque 6.1 Blood Vessel Artery - Tibial 0007610 406 486 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.987455 86876 0.978032 0.989056 0.879804 19961 1 76 0.00277628 168 0 7.11771e+07 0.0216079 443928 7.19647e+07 3.77003e+06 19968 3.54054e+07 0 0.0982282 0.989056 0.870176 7.11771e+07 0.00320065 1.51529e+07 6.94336e+06 1.53251e+07 167 1.52669e+07 1.76039e+07 0.00298812 1.53193e+07 50.0857 0.00616869 0.990657 0 50.2825 GTEX-18D9B-0426-SM-7LTAR 1 B1 2 pieces; focal atrophic fibers; 10% internal fat content 7.8 Muscle Muscle - Skeletal 0011907 407 485 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988525 483591 0.978728 0.992129 0.865323 22718 1 76 0.00243172 276 0 1.10884e+08 0.0209764 1.88768e+06 1.11764e+08 1.15669e+07 22737 5.50869e+07 0 0.113405 0.992129 0.858512 1.10884e+08 0.00370077 2.37057e+07 1.47909e+07 2.38816e+07 301 2.41276e+07 2.27614e+07 0.00306394 2.38089e+07 49.6676 0.01689 0.995732 0 50.1848 GTEX-18D9B-0526-SM-7LTAS 1 B1 6 pieces; well trimmed; 5-10% dermal fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 422 470 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.989609 431548 0.968519 0.992327 0.7963 26027 1 76 0.00265558 303 0 1.08055e+08 0.0312192 1.0627e+06 1.08891e+08 1.20202e+07 26071 5.37084e+07 0 0.172219 0.992327 0.790191 1.08055e+08 0.00393363 2.34497e+07 1.17649e+07 2.35733e+07 300 2.37385e+07 1.89197e+07 0.00329286 2.35576e+07 49.8087 0.00975934 0.995046 0 50.1315 GTEX-18D9B-0726-SM-72D6K 1 B1 2 pieces; focally fragmented 6.2 Thyroid Thyroid 0002046 440 452 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.988661 91418 0.971563 0.989834 0.808755 22996 1 76 0.00271964 143 0 6.62766e+07 0.0281516 346901 6.69573e+07 4.24245e+06 23016 3.29621e+07 0 0.162808 0.989834 0.800533 6.62766e+07 0.00344597 1.4567e+07 6.5648e+06 1.46431e+07 161 1.46646e+07 1.05114e+07 0.00308238 1.46213e+07 49.926 0.00518093 0.991007 0 50.1303 GTEX-18D9B-0926-SM-7LG4U 1 B1 6 pieces; 3 well trimmed, 3 with abundant subcutaneous fat and fragmented 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 455 437 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.980513 297729 0.97712 0.987073 0.828776 24315 1 76 0.00344651 284 0 9.43515e+07 0.02261 841630 9.55872e+07 1.29632e+07 24336 4.67137e+07 0 0.148344 0.987073 0.818062 9.43515e+07 0.00524166 2.06333e+07 1.05895e+07 2.09266e+07 262 2.11481e+07 1.78617e+07 0.00433812 2.09979e+07 49.8218 0.00880484 0.993633 0 50.3529 GTEX-18D9B-1026-SM-72D6A 1 B1 2 pieces; severe interstitial and vascular fibrosis with numerous pigmented alveolar macrophages (heart failure cells) 6.2 Lung Lung 0008952 467 425 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 EXCLUDE 0.991951 105889 0.977016 0.993378 0.829023 23272 1 76 0.00268392 145 0 6.74999e+07 0.0221387 413208 6.79499e+07 4.77161e+06 23291 3.36025e+07 0 0.147992 0.993378 0.823533 6.74999e+07 0.00349934 1.49225e+07 7.29352e+06 1.5049e+07 162 1.50016e+07 1.23897e+07 0.00309105 1.50651e+07 50.1056 0.00608107 0.994805 0 50.2111 GTEX-18D9B-1026-SM-7KFS8 1 B1 2 pieces; severe interstitial and vascular fibrosis with numerous pigmented alveolar macrophages (heart failure cells) 6.2 Lung Lung 0008952 467 425 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.992772 139186 0.977859 0.993871 0.840867 23784 1 76 0.00312221 203 0 7.98291e+07 0.0212892 506726 8.03214e+07 6.14673e+06 23807 3.97252e+07 0 0.136992 0.993871 0.835713 7.98291e+07 0.00300395 1.75196e+07 8.79466e+06 1.78855e+07 205 1.78099e+07 1.48649e+07 0.00306315 1.76843e+07 49.823 0.00630873 0.99497 0 50.5167 GTEX-18D9B-1026-SM-CNPO5 1 B1 2 pieces; severe interstitial and vascular fibrosis with numerous pigmented alveolar macrophages (heart failure cells) 6.2 Lung Lung 0008952 467 425 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984498 271966 0.976747 0.987442 0.82611 24838 1 76 0.00568506 171 0 9.18134e+07 0.0224954 677801 9.29811e+07 2.20264e+07 24863 4.56108e+07 0 0.150637 0.987442 0.815736 9.18134e+07 0.00882977 2.02171e+07 1.20731e+07 2.04357e+07 198 2.04335e+07 1.63091e+07 0.00725273 2.048e+07 50.0568 0.00728966 0.990385 0 50.2688 GTEX-18D9B-1126-SM-7KFSH 1 B1 2 pieces; 50% fibrous & fatty content 8.2 Heart Heart - Atrial Appendage 0006631 469 423 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992364 277746 0.979515 0.994491 0.843298 22743 1 76 0.0025672 271 0 8.86379e+07 0.0201621 1.3159e+06 8.91289e+07 6.22504e+06 22763 4.41061e+07 0 0.136217 0.994491 0.838652 8.86379e+07 0.0031001 1.91534e+07 1.03905e+07 1.93942e+07 266 1.9351e+07 1.50909e+07 0.00283308 1.93667e+07 50.0203 0.014764 0.996618 0 50.3122 GTEX-18D9B-1226-SM-72D6V 1 B1 22 pieces; patchy fibrosis (scars) up to 10% content 7.7 Heart Heart - Left Ventricle 0006566 475 417 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.994001 108513 0.983374 0.99579 0.863783 20399 1 76 0.00223602 155 0 6.61402e+07 0.0163624 1.38796e+06 6.64198e+07 4.96055e+06 20409 3.29655e+07 0 0.119591 0.99579 0.860146 6.61402e+07 0.0029961 1.45958e+07 6.81222e+06 1.4751e+07 174 1.47358e+07 1.12515e+07 0.00261538 1.47105e+07 49.957 0.0208968 0.997579 0 50.2645 GTEX-18D9B-1526-SM-7KFRK 1 B1 2 pieces; severe central vascular congestion and atrophy 7.5 Liver Liver 0001114 495 397 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991609 410424 0.980403 0.993447 0.857714 22040 1 76 0.00283683 269 0 1.01553e+08 0.0184979 1.18001e+06 1.02223e+08 7.57396e+06 22064 5.04859e+07 0 0.122689 0.993447 0.852093 1.01553e+08 0.00317162 2.21673e+07 1.42208e+07 2.2437e+07 327 2.24791e+07 1.94186e+07 0.00300391 2.23018e+07 49.802 0.0115435 0.995284 0 50.3024 GTEX-18D9B-1726-SM-7LTAP 1 B1 2 pieces; adipose tissue with 10% fibrous content 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 505 387 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.98964 328588 0.979014 0.99251 0.84088 23387 1 76 0.00252155 280 0 1.04321e+08 0.0207248 687279 1.05108e+08 1.18913e+07 23411 5.18742e+07 0 0.138135 0.99251 0.834581 1.04321e+08 0.00366144 2.29658e+07 1.1723e+07 2.31027e+07 308 2.32285e+07 1.87949e+07 0.00308985 2.31152e+07 49.8778 0.0065388 0.99538 0 50.1486 GTEX-18D9B-1926-SM-7KFSV 2 B1 2 pieces; 40% external adipose content 7.2 Adrenal Gland Adrenal Gland 0002369 511 381 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991046 236092 0.975961 0.993219 0.823534 23595 1 76 0.00294248 270 0 8.97202e+07 0.0237712 2.05045e+06 9.03328e+07 7.21193e+06 23627 4.46302e+07 0 0.152427 0.993219 0.817949 8.97202e+07 0.00286696 1.96147e+07 1.00805e+07 2.0032e+07 298 2.00069e+07 1.28346e+07 0.0029048 1.98174e+07 49.7622 0.0226988 0.995392 0 50.5262 GTEX-18D9B-2026-SM-7LT96 1 B1 6 pieces; squamous hyperplasia consistent with reflux; superficial sloughing 8.9 Esophagus Esophagus - Mucosa 0006920 524 368 BP-53046 RNA Extraction from Paxgene-derived Lysate Plate Based 05/21/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990363 330918 0.976479 0.992932 0.826943 23722 1 76 0.00264187 288 0 1.10466e+08 0.02316 534237 1.11252e+08 1.08244e+07 23752 5.49292e+07 0 0.149536 0.992932 0.821098 1.10466e+08 0.00408308 2.46702e+07 1.47092e+07 2.48354e+07 310 2.49695e+07 2.27773e+07 0.00336061 2.48091e+07 49.8389 0.00480204 0.9955 0 50.1669 GTEX-18D9B-2126-SM-7LTAQ 1 B1 6 pieces; 1 piece contains 70% adventitial nerves; another piece contains focus of mucosal carry-over 7.3 Esophagus Esophagus - Muscularis 0004648 528 364 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990238 298586 0.975191 0.992365 0.826309 24466 1 76 0.0026124 284 0 1.053e+08 0.024507 1.06056e+06 1.0611e+08 1.1299e+07 24496 5.2397e+07 0 0.148882 0.992365 0.82 1.053e+08 0.00349978 2.30139e+07 1.11443e+07 2.3158e+07 284 2.32758e+07 1.90572e+07 0.00305513 2.31008e+07 49.8113 0.00999499 0.994491 0 50.1561 GTEX-18D9B-2226-SM-718BM 1 B1 6 pieces; possible fixation artifacts; 1 piece has no muscularis 6.2 Stomach Stomach 0000945 532 360 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966116 304764 0.974286 0.97944 0.806725 24891 1 76 0.00248055 379 0 1.09996e+08 0.0254501 1.12167e+06 1.12305e+08 5.61874e+06 24930 5.40227e+07 0 0.16756 0.97944 0.790139 1.09996e+08 0.00549044 2.39598e+07 1.21703e+07 2.39183e+07 350 2.46389e+07 1.84283e+07 0.00396502 2.46532e+07 50.0145 0.00998775 0.992763 0 49.9567 GTEX-18D9B-2526-SM-718BN 2 B1 6 pieces 6 Colon Colon - Transverse 0001157 540 352 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965252 384688 0.973423 0.979667 0.801954 24548 1 76 0.0024198 375 0 1.06998e+08 0.0263489 1.38495e+06 1.09218e+08 5.2824e+06 24584 5.25111e+07 0 0.171469 0.979667 0.785648 1.06998e+08 0.00539824 2.31572e+07 1.12782e+07 2.30831e+07 347 2.38595e+07 1.57947e+07 0.00388711 2.38441e+07 49.9839 0.0126806 0.994082 0 49.9199 GTEX-18D9B-2726-SM-72D73 1 B1 2 pieces; autolysis varies from slight to moderate between the 2 pieces 7.1 Testis Testis 0000473 570 322 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990867 198524 0.930355 0.992566 0.728162 32559 1 76 0.00269756 172 0 8.18568e+07 0.0693235 754479 8.24699e+07 4.42072e+06 32626 4.0773e+07 0 0.202193 0.992566 0.722748 8.18568e+07 0.00354756 1.70568e+07 1.00022e+07 1.71543e+07 166 1.72188e+07 1.38095e+07 0.00312183 1.7111e+07 49.8431 0.00914853 0.994265 0 50.1424 GTEX-18D9B-5001-SM-AN45C B1 Muscle Muscle - Skeletal 0011907 407 ChIP-Seq GTEX-18D9B-5010-SM-AN45B B1 Heart Heart - Left Ventricle 0006566 475 ChIP-Seq GTEX-18D9U-0001-SM-DINAT B1 Blood Whole Blood 0013756 265 BP-52080 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/28/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18D9U-0001-SM-DJWXR B1 Blood Whole Blood 0013756 265 BP-52080 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/28/2014 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18D9U-0006-SM-7SB6M B1 8.8 Blood Whole Blood 0013756 265 BP-52113 RNA isolation_PAXgene Blood RNA (Manual) 04/28/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987298 582969 0.951812 0.990223 0.721986 21296 1 76 0.00309319 130 0 7.80621e+07 0.0476836 320315 7.88328e+07 8.16718e+06 21333 3.87925e+07 0 0.229826 0.990223 0.714927 7.80621e+07 0.0052703 1.6948e+07 3.15936e+07 1.71587e+07 142 1.72419e+07 1.40566e+07 0.00417853 1.71014e+07 49.7953 0.00406322 0.993149 0 50.3089 GTEX-18D9U-0008-SM-EAZBW B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 805 BP-53465 RNA isolation_Trizol Manual (Cell Pellet) 06/03/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992655 629505 0.973131 0.993737 0.838558 21919 1 76 0.00181406 302 0 1.11159e+08 0.0264526 291104 1.11859e+08 8.6844e+06 21951 5.53962e+07 0 0.134573 0.993737 0.833306 1.11159e+08 0.00272978 2.47193e+07 1.60292e+07 2.48724e+07 293 2.4915e+07 2.60134e+07 0.00227142 2.47953e+07 49.8797 0.00260242 0.994819 0 50.1543 GTEX-18D9U-0126-SM-731BM 0 B1 6 pieces, no signficant adherent dermal fat; squamous epithelium is ~70 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 269 588 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989054 148633 0.971342 0.990812 0.79359 22392 1 76 0.00305692 139 0 5.83046e+07 0.0284693 472015 5.88453e+07 3.03175e+06 22410 2.8999e+07 0 0.177751 0.990812 0.786299 5.83046e+07 0.00352323 1.28298e+07 6.14758e+06 1.29998e+07 144 1.29992e+07 8.5382e+06 0.00328966 1.29262e+07 49.8593 0.00802129 0.99257 0 50.3291 GTEX-18D9U-0226-SM-718BP 0 B1 6 pieces, trace dermal fat (delineated); squamous epithelium is ~0 microns 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 278 579 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.950583 340534 0.968675 0.961728 0.796144 25908 1 76 0.00254223 397 0 1.25758e+08 0.0311141 1.32469e+06 1.30763e+08 5.91342e+06 25950 6.19491e+07 0 0.172531 0.961728 0.765674 1.25758e+08 0.00514921 2.72317e+07 1.5214e+07 2.72459e+07 341 2.79526e+07 1.89406e+07 0.00383062 2.78963e+07 49.9496 0.0101305 0.972873 0 50.013 GTEX-18D9U-0426-SM-731AN 1 B1 2 pieces, ~5-10% fascia/vascular elements 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 293 564 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990612 214457 0.977515 0.992657 0.824372 22071 1 76 0.00295252 162 0 7.10295e+07 0.0222308 742743 7.15549e+07 3.13753e+06 22089 3.53438e+07 0 0.153143 0.992657 0.818318 7.10295e+07 0.00350804 1.57415e+07 5.94797e+06 1.58834e+07 176 1.58879e+07 1.13142e+07 0.00322971 1.58695e+07 49.971 0.01038 0.994702 0 50.2242 GTEX-18D9U-0526-SM-72D7C 1 B1 2 pieces, moderate congestion, subacute/chronic pneumonitis/interstitial fibrosis 8.6 Lung Lung 0008952 299 558 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993594 155019 0.977769 0.994749 0.810377 23291 1 76 0.00269968 158 0 7.66434e+07 0.0219044 442676 7.7048e+07 4.01643e+06 23312 3.81814e+07 0 0.167392 0.994749 0.806122 7.66434e+07 0.00328265 1.7084e+07 6.07182e+06 1.71589e+07 172 1.71716e+07 1.43482e+07 0.00299083 1.71577e+07 49.9798 0.00574546 0.995903 0 50.1093 GTEX-18D9U-0626-SM-7LTA4 0 B1 2 pieces, ~10% tendon insertion/fascia/adipose elements, rep delineated. 8.5 Muscle Muscle - Skeletal 0011907 307 550 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.990296 505574 0.983514 0.993384 0.88386 20483 1 76 0.00253891 280 0 1.00287e+08 0.0161796 1.03091e+06 1.00955e+08 1.06498e+07 20494 4.98568e+07 0 0.0996544 0.993384 0.878012 1.00287e+08 0.00354481 2.16524e+07 1.25485e+07 2.17945e+07 260 2.20341e+07 2.20338e+07 0.0030403 2.1688e+07 49.6043 0.0102116 0.996471 0 50.1636 GTEX-18D9U-0726-SM-7LG5J 0 B1 1 piece + small fragment; ~10% fascia, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 310 547 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.979944 284724 0.97602 0.986263 0.826011 22879 1 76 0.00368398 162 0 7.43563e+07 0.0237213 820212 7.5392e+07 1.12838e+07 22898 3.68023e+07 0 0.150009 0.986263 0.814665 7.43563e+07 0.0056081 1.61575e+07 9.05903e+06 1.63774e+07 175 1.6527e+07 1.19016e+07 0.00463988 1.6436e+07 49.8619 0.0108793 0.992583 0 50.338 GTEX-18D9U-0826-SM-7LG5K 0 B1 2 pieces, no significant adherent fat 7.3 Nerve Nerve - Tibial 0001323 314 543 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976711 481632 0.970098 0.985145 0.786849 25203 1 76 0.00344023 226 0 9.40227e+07 0.0296002 469180 9.54404e+07 1.45943e+07 25241 4.64466e+07 0 0.183248 0.985145 0.775161 9.40227e+07 0.00597402 2.0514e+07 1.09932e+07 2.0703e+07 242 2.10761e+07 1.59438e+07 0.00469628 2.08913e+07 49.7798 0.00491594 0.993579 0 50.2293 GTEX-18D9U-0926-SM-731AZ 0 B1 2 pieces, prominent nubbins of adherent fat/fibrous tissue up to ~5x2.5mm, rep delineated 8.6 Blood Vessel Artery - Tibial 0007610 317 540 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991855 185290 0.978275 0.993606 0.857948 21193 1 76 0.00274184 149 0 6.90334e+07 0.0213336 281844 6.94776e+07 2.9565e+06 21211 3.43619e+07 0 0.120327 0.993606 0.852463 6.90334e+07 0.00313127 1.49484e+07 4.72343e+06 1.51363e+07 158 1.51246e+07 1.4258e+07 0.00293621 1.50714e+07 49.9119 0.00405662 0.995357 0 50.3122 GTEX-18D9U-1026-SM-72D5R 1 B1 2 pieces, no signficant abnormalities 6.5 Thyroid Thyroid 0002046 321 536 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992347 157292 0.967186 0.993501 0.765672 24045 1 76 0.00271646 166 0 8.10215e+07 0.0324672 321652 8.15515e+07 4.34806e+06 24081 4.03526e+07 0 0.201514 0.993501 0.760696 8.10215e+07 0.00330719 1.77446e+07 8.09592e+06 1.78477e+07 186 1.78536e+07 1.23578e+07 0.00301148 1.78275e+07 49.9634 0.00394416 0.994655 0 50.1449 GTEX-18D9U-1126-SM-72D5Y 1 B1 2 pieces, minimal interstitial fibrosis/chronic ischemic changes 8.4 Heart Heart - Left Ventricle 0006566 324 533 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.994831 81726 0.983715 0.996363 0.873569 18921 1 76 0.00242079 103 0 5.09228e+07 0.016 828094 5.11087e+07 3.67593e+06 18930 2.53895e+07 0 0.110145 0.996363 0.870392 5.09228e+07 0.0031217 1.12608e+07 5.2268e+06 1.13477e+07 125 1.13114e+07 9.15510e+06 0.00277071 1.1362e+07 50.1116 0.0162026 0.997896 0 50.1923 GTEX-18D9U-1326-SM-731BI 1 B1 6 pieces, minimal atherosis 7.4 Blood Vessel Artery - Aorta 0001496 334 523 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.99127 186021 0.978947 0.993085 0.83764 21338 1 76 0.00296523 140 0 6.50936e+07 0.0205117 181832 6.55469e+07 2.91509e+06 21350 3.23893e+07 0 0.141307 0.993085 0.831848 6.50936e+07 0.0033456 1.41577e+07 4.48362e+06 1.42745e+07 147 1.43089e+07 1.30124e+07 0.00315506 1.42329e+07 49.8669 0.00277407 0.9949 0 50.2055 GTEX-18D9U-1426-SM-718BO 1 B1 3 pieces, no abnormalities 8.6 Heart Heart - Atrial Appendage 0006631 341 516 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.979484 340559 0.978876 0.987876 0.837875 23345 1 76 0.00248709 271 0 1.1572e+08 0.0208118 2.05915e+06 1.1714e+08 5.2725e+06 23364 5.72429e+07 0 0.141001 0.987876 0.827716 1.1572e+08 0.0046072 2.50884e+07 1.5127e+07 2.5227e+07 301 2.56164e+07 1.93623e+07 0.00353814 2.55599e+07 49.9448 0.0175785 0.996267 0 50.1377 GTEX-18D9U-1626-SM-7KFTW 1 B1 2 pieces, Islets scarce but fairly well preserved, approaching score '2' 7.4 Pancreas Pancreas 0001150 343 514 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991223 264516 0.97877 0.993118 0.86598 22617 1 76 0.0028273 154 0 9.29683e+07 0.0209552 245032 9.36125e+07 6.85698e+06 22635 4.62704e+07 0 0.11279 0.993118 0.86002 9.29683e+07 0.00319322 2.10056e+07 1.75592e+07 2.12647e+07 166 2.13683e+07 2.58031e+07 0.00300991 2.1086e+07 49.6675 0.00261751 0.995014 0 50.3064 GTEX-18D9U-1726-SM-7LTA5 1 B1 6 pieces, confirmed target muscularis 7.3 Esophagus Esophagus - Muscularis 0004648 349 508 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6683 03/14/2015 TruSeq.v1 RNASEQ 0.988623 392998 0.980842 0.99198 0.881439 22322 1 76 0.00261655 281 0 1.06459e+08 0.0188949 1.37648e+06 1.0732e+08 1.14018e+07 22337 5.28827e+07 0 0.0994033 0.99198 0.874369 1.06459e+08 0.00397449 2.30584e+07 1.1983e+07 2.31609e+07 306 2.33067e+07 1.9547e+07 0.00329322 2.32292e+07 49.9167 0.0128259 0.995336 0 50.111 GTEX-18D9U-1926-SM-7KFTM 1 B1 6 pieces, mucosa is ~0.2-0.3mm, ~10% total thickness 7.1 Colon Colon - Transverse 0001157 357 500 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.992569 169329 0.975645 0.993753 0.84755 25062 1 76 0.00295036 282 0 1.1684e+08 0.0235718 1.33537e+06 1.17575e+08 8.38475e+06 25098 5.81875e+07 0 0.128096 0.993753 0.842256 1.1684e+08 0.0030087 2.59274e+07 1.34615e+07 2.61374e+07 302 2.60736e+07 1.99349e+07 0.0029795 2.61087e+07 50.0336 0.0113576 0.994937 0 50.2017 GTEX-18D9U-2126-SM-7LG4Y 1 B1 6 pieces, squamous mucosa is ~0.25-0.5mm, ~25% thickness 8.2 Esophagus Esophagus - Mucosa 0006920 364 493 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976148 282301 0.97967 0.984286 0.856498 22089 1 76 0.00350904 207 0 8.43126e+07 0.0199622 627165 8.56586e+07 1.3035e+07 22101 4.16881e+07 0 0.123172 0.984286 0.843039 8.43126e+07 0.00582531 1.89033e+07 1.49202e+07 1.90225e+07 230 1.92832e+07 1.67453e+07 0.0046576 1.93031e+07 50.0259 0.00732168 0.992424 0 50.1572 GTEX-18D9U-2226-SM-7KFTN 1 B1 2 pieces, all glandular parenchyma, excellent specimens 6.7 Salivary Gland Minor Salivary Gland 0006330 365 492 BP-53102 RNA Extraction from Paxgene-derived Lysate Plate Based 05/22/2014 LCSET-6680 02/26/2015 TruSeq.v1 RNASEQ 0.991749 254449 0.975628 0.993194 0.830603 23789 1 76 0.0033113 209 0 8.47826e+07 0.0235855 520639 8.53637e+07 6.88338e+06 23815 4.218e+07 0 0.145025 0.993194 0.824949 8.47826e+07 0.0030583 1.88026e+07 9.94786e+06 1.91627e+07 224 1.91491e+07 1.44548e+07 0.00318498 1.89351e+07 49.719 0.00609907 0.994638 0 50.4742 GTEX-18D9U-5004-SM-AN44W B1 Lung Lung 0008952 303 ChIP-Seq GTEX-18D9U-5010-SM-AN44Y B1 Heart Heart - Left Ventricle 0006566 326 ChIP-Seq GTEX-18QFQ-0003-SM-DINAU B1 Blood Whole Blood 0013756 -73 BP-52372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/05/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-18QFQ-0003-SM-DLIOZ B1 Blood Whole Blood 0013756 -73 BP-52372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/05/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-18QFQ-0006-SM-7SB6X B1 8.4 Blood Whole Blood 0013756 -73 BP-52410 RNA isolation_PAXgene Blood RNA (Manual) 05/05/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991149 579017 0.946797 0.993164 0.723252 20784 1 76 0.00290184 128 0 8.08548e+07 0.0527885 203375 8.14114e+07 8.67252e+06 20821 4.0247e+07 0 0.223544 0.993164 0.718308 8.08548e+07 0.00443032 1.75181e+07 4.33562e+07 1.77639e+07 142 1.78061e+07 1.50084e+07 0.00366453 1.76449e+07 49.7727 0.00249812 0.995179 0 50.3484 GTEX-18QFQ-0008-SM-EAZD7 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 455 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993641 215458 0.984812 0.994615 0.870899 18847 1 76 0.0018105 154 0 6.76169e+07 0.0148825 102181 6.7983e+07 5.4498e+06 18855 3.3715e+07 0 0.113913 0.994615 0.866209 6.76169e+07 0.00271949 1.53225e+07 5.44674e+06 1.53999e+07 143 1.541e+07 1.84298e+07 0.00226455 1.53746e+07 49.9425 0.00150304 0.995588 0 50.1261 GTEX-18QFQ-0126-SM-731BE 1 B1 6 pieces; epidermis measures 36 microns, few pieces include attached fat up to 15% 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 457 639 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988602 140865 0.972984 0.990156 0.817735 23483 1 76 0.00340602 184 0 7.46511e+07 0.026806 687542 7.53933e+07 4.13210e+06 23507 3.71177e+07 0 0.155248 0.990156 0.809686 7.46511e+07 0.00389101 1.62948e+07 7.43906e+06 1.6445e+07 180 1.64432e+07 1.20314e+07 0.00364813 1.64068e+07 49.9446 0.00911941 0.99171 0 50.2294 GTEX-18QFQ-0226-SM-731BQ 1 B1 2 pieces; mature fat with small contribution of fibrous/nerve/vascular tissue 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 462 634 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988465 76235 0.976448 0.989667 0.811148 20647 1 76 0.00346634 119 0 4.94009e+07 0.02328 386682 4.99167e+07 2.90322e+06 20664 2.45539e+07 0 0.1653 0.989667 0.802767 4.94009e+07 0.00386913 1.08547e+07 4.0769e+06 1.09023e+07 122 1.09197e+07 8.04588e+06 0.00366749 1.08946e+07 49.9425 0.00774654 0.990869 0 50.1094 GTEX-18QFQ-0326-SM-731C3 1 B1 2 pieces; skeletal muscle with scant internal fat, rare atrophic fiber 8.5 Muscle Muscle - Skeletal 0011907 467 629 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.991245 174967 0.984722 0.993623 0.888817 18998 1 76 0.0029858 133 0 6.09402e+07 0.0150472 499951 6.13313e+07 3.34938e+06 19001 3.03336e+07 0 0.0959041 0.993623 0.88315 6.09402e+07 0.00349514 1.30436e+07 5.46618e+06 1.31706e+07 140 1.31965e+07 1.3132e+07 0.00323986 1.31445e+07 49.9014 0.00815165 0.996001 0 50.2422 GTEX-18QFQ-0426-SM-72D7E 0 B1 2 pieces; includes ~15% attached and internal fat 5.7 Nerve Nerve - Tibial 0001323 476 620 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.992234 89149 0.971801 0.993812 0.794829 21921 1 76 0.00250637 130 0 5.21829e+07 0.0278857 226553 5.25078e+07 3.93522e+06 21937 2.59879e+07 0 0.176972 0.993812 0.789911 5.21829e+07 0.00330587 1.15024e+07 3.98334e+06 1.15502e+07 127 1.15447e+07 8.7281e+06 0.00290549 1.15856e+07 50.0883 0.00431466 0.99539 0 50.1036 GTEX-18QFQ-0526-SM-718AV 1 B1 2 pieces 8 Blood Vessel Artery - Tibial 0007610 481 615 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966902 438584 0.978615 0.980765 0.856914 23302 1 76 0.00239741 382 0 1.30359e+08 0.0208624 344598 1.32915e+08 6.09311e+06 23323 6.40466e+07 0 0.121701 0.980765 0.84043 1.30359e+08 0.00537516 2.77903e+07 1.01856e+07 2.77558e+07 351 2.86298e+07 2.86367e+07 0.00386524 2.86324e+07 50.0022 0.00259261 0.994627 0 49.969 GTEX-18QFQ-0626-SM-718AW 1 B1 2 pieces; mild chronic inflammation, one piece is ~70% stroma and lip 8 Salivary Gland Minor Salivary Gland 0006330 618 478 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968397 355828 0.971919 0.980916 0.789253 25816 1 76 0.00280334 279 0 1.13759e+08 0.0271199 388221 1.15972e+08 5.44907e+06 25856 5.59249e+07 0 0.182667 0.980916 0.774191 1.13759e+08 0.00574597 2.51286e+07 1.3463e+07 2.50657e+07 289 2.58074e+07 2.06592e+07 0.00425588 2.58232e+07 50.0153 0.00334753 0.993434 0 49.9373 GTEX-18QFQ-0726-SM-7LG6D 2 B1 2 pieces; some fibrosis and nodularity 7.2 Thyroid Thyroid 0002046 627 469 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.976662 749902 0.96032 0.984312 0.7494 25946 1 76 0.00355466 277 0 1.19543e+08 0.0393347 427202 1.21449e+08 1.73958e+07 26004 5.90868e+07 0 0.21092 0.984312 0.737644 1.19543e+08 0.00596182 2.57389e+07 2.00633e+07 2.58883e+07 268 2.64074e+07 2.01692e+07 0.00474889 2.60741e+07 49.6825 0.00351756 0.991963 0 50.1447 GTEX-18QFQ-0826-SM-718AX 1 B1 2 pieces; predominantly fat with 15 and 25% fibrous stroma with few ducts 7.6 Breast Breast - Mammary Tissue 0008367 635 461 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.964569 426998 0.967966 0.977214 0.774702 26722 1 76 0.0026865 285 0 1.16862e+08 0.0317188 548376 1.19587e+08 7.3975e+06 26776 5.72797e+07 0 0.193264 0.977214 0.757049 1.16862e+08 0.00566377 2.5413e+07 1.07189e+07 2.52398e+07 329 2.61015e+07 1.97208e+07 0.00415587 2.60032e+07 49.9057 0.00458558 0.989858 0 49.8291 GTEX-18QFQ-0926-SM-7LG4V 1 B1 2 pieces; pigmented macrophages and patchy atelectasis, rare giant cell (?aspiration) 7.8 Lung Lung 0008952 639 457 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.984863 387861 0.970643 0.988957 0.762267 25291 1 76 0.00396679 209 0 1.01907e+08 0.0290478 606600 1.03045e+08 1.37073e+07 25331 5.05692e+07 0 0.208376 0.988957 0.753849 1.01907e+08 0.0053238 2.23714e+07 1.36284e+07 2.26509e+07 253 2.27968e+07 1.65852e+07 0.00464249 2.26162e+07 49.8012 0.00588676 0.99305 0 50.3104 GTEX-18QFQ-1026-SM-7LG6B 1 B1 6 pieces; 2 pieces include submucosal glands (~25%) 9.7 Esophagus Esophagus - Mucosa 0006920 653 443 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682,LCSET-7011 04/01/2015 TruSeq.v1 RNASEQ 0.987786 257381 0.977979 0.989672 0.852634 21763 1 76 0.00705091 143 0 7.13882e+07 0.0214181 445114 7.21332e+07 1.62679e+07 21778 3.54908e+07 0 0.125345 0.989672 0.843828 7.13882e+07 0.0031575 1.56946e+07 1.31186e+07 1.63254e+07 145 1.63883e+07 1.71412e+07 0.00510792 1.5758e+07 49.0197 0.00617072 0.991558 0 50.985 GTEX-18QFQ-1126-SM-72D6R 1 B1 6 pieces; target muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 659 437 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122 11/06/2014 TruSeq.v1 RNASEQ 0.994354 714871 0.97457 0.995403 0.818349 27051 1 76 0.00253303 548 0 3.02479e+08 0.025098 1.72168e+06 3.03875e+08 1.53383e+07 27121 1.50749e+08 0 0.156221 0.995403 0.814588 3.02479e+08 0.00342159 6.53737e+07 2.51473e+07 6.57987e+07 557 6.56375e+07 5.29965e+07 0.00297684 6.58377e+07 50.0761 0.00566575 0.996452 0 50.162 GTEX-18QFQ-1226-SM-718AE 1 B1 6 pieces; predominanlty mucosa and submucosa, two pieces include portion of muscularis (also target), mild to moderate autolysis 6.7 Stomach Stomach 0000945 667 429 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.961475 186467 0.980022 0.975001 0.84995 23001 1 76 0.00273527 364 0 9.64006e+07 0.01961 1.8355e+06 9.88723e+07 4.92387e+06 23024 4.73817e+07 0 0.130073 0.975001 0.828702 9.64006e+07 0.00607627 2.1651e+07 9.5335e+07 2.19004e+07 297 2.25936e+07 2.00044e+07 0.00438259 2.22673e+07 49.6364 0.0185644 0.988526 0 50.2863 GTEX-18QFQ-1326-SM-731CF 1 B1 2 pieces; fat with few larger vessels 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 674 422 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989848 106423 0.974632 0.991518 0.809032 21735 1 76 0.00376995 126 0 5.66905e+07 0.0251111 690800 5.71755e+07 3.02655e+06 21747 2.8198e+07 0 0.1656 0.991518 0.80217 5.66905e+07 0.00418897 1.24743e+07 4.83477e+06 1.26094e+07 136 1.26022e+07 8.49338e+06 0.00397911 1.25685e+07 49.9331 0.0120821 0.993188 0 50.2695 GTEX-18QFQ-1526-SM-72D57 1 B1 6 pieces; predominantly muscularis, 2 pieces include small portion of mucosa 7.9 Colon Colon - Transverse 0001157 688 408 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993444 130571 0.978428 0.994522 0.84772 22030 1 76 0.00268459 203 0 7.9464e+07 0.0212863 552396 7.99018e+07 4.18934e+06 22045 3.95917e+07 0 0.130708 0.994522 0.843076 7.9464e+07 0.0032855 1.73681e+07 6.71639e+06 1.7506e+07 204 1.74988e+07 1.38341e+07 0.00298472 1.74582e+07 49.9419 0.00691344 0.995599 0 50.1977 GTEX-18QFQ-1626-SM-72D7H 2 B1 6 pieces; good lymphoid component, single non-caseating granuloma (marked) 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 695 401 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.991105 146389 0.959734 0.992311 0.740461 24873 1 76 0.00328092 142 0 7.48899e+07 0.039227 166170 7.54702e+07 4.07577e+06 24907 3.72591e+07 0 0.219272 0.992311 0.734768 7.48899e+07 0.00390088 1.6389e+07 8.77553e+06 1.64121e+07 154 1.64624e+07 1.18702e+07 0.00359052 1.64248e+07 49.9428 0.0022018 0.993518 0 50.0352 GTEX-18QFQ-1726-SM-731C9 2 B1 6 pieces; predominantly muscularis, 2 include substantial fat, 1 includes small portion of mucosa 6.8 Colon Colon - Sigmoid 0001159 716 380 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990685 207547 0.972418 0.992639 0.800772 22375 1 76 0.00309886 145 0 6.58554e+07 0.0273392 418294 6.63438e+07 2.98389e+06 22397 3.27635e+07 0 0.171646 0.992639 0.794877 6.58554e+07 0.00354429 1.43142e+07 5.62485e+06 1.44432e+07 152 1.44526e+07 1.04609e+07 0.00332113 1.4427e+07 49.9557 0.00630495 0.994593 0 50.2242 GTEX-18QFQ-1826-SM-72D52 1 B1 6 pieces; well trimmed 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 709 387 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990525 122148 0.972107 0.991752 0.799846 23092 1 76 0.00293149 180 0 7.53549e+07 0.027696 452413 7.59816e+07 4.17045e+06 23117 3.75062e+07 0 0.172261 0.991752 0.793249 7.53549e+07 0.00375076 1.66043e+07 7.76473e+06 1.66534e+07 180 1.66632e+07 1.1964e+07 0.00334062 1.66871e+07 50.0358 0.00595425 0.992979 0 50.0737 GTEX-18QFQ-1926-SM-72D5H 2 B1 2 pieces; spermatogenesis is present 6.2 Testis Testis 0000473 702 394 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991486 163127 0.92949 0.99312 0.703653 31632 1 76 0.00277204 123 0 6.22779e+07 0.0702442 642902 6.27093e+07 4.30551e+06 31685 3.10288e+07 0 0.225837 0.99312 0.698812 6.22779e+07 0.00339182 1.29867e+07 8.07215e+06 1.30433e+07 124 1.30703e+07 8.95164e+06 0.00308142 1.30455e+07 49.9526 0.0102521 0.994754 0 50.1087 GTEX-18QFQ-2026-SM-72D7J 1 B1 2 pieces; admixed stroma and glands 6.3 Prostate Prostate 0002367 715 381 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990036 112428 0.964588 0.991125 0.786232 24174 1 76 0.00313296 155 0 7.13421e+07 0.0352288 743471 7.19809e+07 4.08618e+06 24208 3.54972e+07 0 0.178356 0.991125 0.779254 7.13421e+07 0.00395549 1.57389e+07 7.1645e+06 1.58038e+07 179 1.5816e+07 8.64416e+06 0.00354377 1.58008e+07 49.9759 0.0103287 0.992214 0 50.1028 GTEX-19HZE-0002-SM-7J39O C1 Blood Whole Blood 0013756 910 BP-52574 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-19HZE-0002-SM-7MD4L C1 Blood Whole Blood 0013756 910 BP-52574 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-19HZE-0011-R11b-SM-79ONN C1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 925 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.992774 265822 0.948884 0.993051 0.753214 22658 1 76 0.00330135 125 0 6.46374e+07 0.0507454 1.52887e+06 6.50898e+07 3.70352e+06 22682 3.2186e+07 0 0.19567 0.993051 0.74798 6.46374e+07 0.00445904 1.39541e+07 8.97791e+06 1.40722e+07 153 1.4065e+07 7.26876e+06 0.00388003 1.3975e+07 49.8394 0.0234886 0.993327 0 50.2107 GTEX-19HZE-0011-R5a-SM-79OOU C1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 925 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.993755 294202 0.968758 0.994251 0.838867 21878 1 76 0.0031188 145 0 6.25228e+07 0.0310918 5.78476e+06 6.28844e+07 3.53979e+06 21893 3.11598e+07 0 0.129891 0.994251 0.834044 6.25228e+07 0.00435087 1.35371e+07 1.74086e+07 1.40458e+07 199 1.37976e+07 4.2099e+06 0.00373453 1.37989e+07 50.0023 0.0919905 0.994746 0 50.9222 GTEX-19HZE-0126-SM-73KX7 1 C1 6 pieces; well trimmed; 5% dermal fat 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1000 1014 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.9923 213837 0.967955 0.993477 0.754949 23860 1 76 0.00270173 166 0 7.51762e+07 0.0318689 702940 7.56698e+07 7.56588e+06 23899 3.7443e+07 0 0.213006 0.993477 0.750024 7.51762e+07 0.00331459 1.65256e+07 8.44317e+06 1.66116e+07 177 1.66069e+07 1.05348e+07 0.0030078 1.66194e+07 50.0188 0.00928957 0.994654 0 50.1298 GTEX-19HZE-0326-SM-7189K 1 C1 2 pieces; no lesions 6.8 Thyroid Thyroid 0002046 1003 1012 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.965021 570560 0.964525 0.979666 0.788265 26173 1 76 0.00244141 381 0 1.30177e+08 0.0351686 340386 1.32879e+08 6.22319e+06 26213 6.38943e+07 0 0.17626 0.979666 0.772236 1.30177e+08 0.00542311 2.79786e+07 1.88066e+07 2.80563e+07 354 2.89882e+07 2.34213e+07 0.00390997 2.8933e+07 49.9523 0.00256163 0.994311 0 50.0694 GTEX-19HZE-0426-SM-731C8 1 C1 2 pieces; atrophic ducts and lobules; 60% fat content 6.2 Breast Breast - Mammary Tissue 0008367 1005 1011 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.987933 129688 0.974808 0.989696 0.761812 22929 1 76 0.003259 125 0 5.73188e+07 0.024463 253714 5.79156e+07 2.94623e+06 22956 2.84691e+07 0 0.212996 0.989696 0.753962 5.73188e+07 0.00373211 1.26596e+07 5.06386e+06 1.27247e+07 132 1.27586e+07 9.07636e+06 0.00349513 1.27241e+07 49.9322 0.00438075 0.991459 0 50.1282 GTEX-19HZE-0626-SM-73KXJ 1 C1 2 pieces; thin rim of external fat occupies 20% & 5% 5.6 Nerve Nerve - Tibial 0001323 1007 1010 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.991747 212538 0.961825 0.992986 0.71354 24682 1 76 0.00277899 149 0 7.34043e+07 0.0379567 320445 7.39228e+07 7.55043e+06 24725 3.65428e+07 0 0.248285 0.992986 0.708535 7.34043e+07 0.00345418 1.60526e+07 7.20565e+06 1.60675e+07 164 1.60826e+07 9.49259e+06 0.00311616 1.61266e+07 50.0684 0.00433486 0.994225 0 50.0231 GTEX-19HZE-2126-SM-72D4X 0 C1 2 pieces; well trimmed 7.6 Muscle Muscle - Skeletal 0011907 1035 990 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.993746 121418 0.977548 0.994993 0.849799 20777 1 76 0.00242039 165 0 7.30965e+07 0.0222316 540559 7.34643e+07 3.97109e+06 20791 3.64217e+07 0 0.127749 0.994993 0.845544 7.30965e+07 0.00313569 1.60654e+07 5.29063e+06 1.61203e+07 174 1.61417e+07 1.41853e+07 0.00277759 1.61276e+07 49.9782 0.00735812 0.99624 0 50.0852 GTEX-19HZE-2326-SM-7189J 1 C1 6 pieces; partially sloughed epithelium 5.6 Vagina Vagina 0000996 1038 988 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.961291 337538 0.969355 0.976276 0.770181 25958 1 76 0.0026047 375 0 1.25466e+08 0.0304085 1.52739e+06 1.28515e+08 6.86487e+06 26006 6.14527e+07 0 0.199174 0.976276 0.751909 1.25466e+08 0.00576482 2.71738e+07 1.33311e+07 2.71271e+07 374 2.80854e+07 1.75553e+07 0.00416051 2.80763e+07 49.9919 0.011885 0.991261 0 49.957 GTEX-19HZE-2926-SM-718BQ 1 C1 6 pieces; well trimmed; 5% dermal fat 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1052 978 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.962423 365679 0.9703 0.977025 0.757154 25794 1 76 0.0026344 280 0 1.11995e+08 0.0294891 1.27394e+06 1.14629e+08 5.89292e+06 25847 5.49039e+07 0 0.213145 0.977025 0.739758 1.11995e+08 0.00571812 2.44346e+07 1.41205e+07 2.43319e+07 287 2.51882e+07 1.74071e+07 0.00415322 2.52096e+07 50.0212 0.0111137 0.991627 0 49.8947 GTEX-19HZE-3026-SM-718BR 2 C1 4 pieces; autolysis varies from piece to piece, 1 to 3 6.2 Brain Brain - Cerebellum 0002037 1054 976 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.968316 1.05375e+06 0.926252 0.980854 0.716903 24944 1 76 0.00268283 268 0 1.0613e+08 0.0734524 2.51376e+06 1.08201e+08 5.02556e+06 24984 5.21947e+07 0 0.20935 0.980854 0.703176 1.0613e+08 0.00543662 2.21383e+07 4.1975e+07 2.23407e+07 316 2.29844e+07 1.01592e+07 0.00404212 2.27339e+07 49.726 0.0232323 0.993391 0 50.2274 GTEX-19HZE-3126-SM-731BC 2 C1 4 pieces 6 Brain Brain - Cortex 0001870 1056 975 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.988037 397995 0.96109 0.989861 0.83993 22148 1 76 0.00302742 259 0 7.20902e+07 0.0387702 6.31620e+06 7.28286e+07 3.40128e+06 22159 3.58725e+07 0 0.12116 0.989861 0.831414 7.20902e+07 0.00346597 1.5519e+07 2.07567e+07 1.6255e+07 260 1.59933e+07 4.59785e+06 0.00324629 1.58853e+07 49.8306 0.086727 0.991686 0 51.1581 GTEX-1A32A-0001-SM-7J3A1 C1 Blood Whole Blood 0013756 505 BP-52853 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/16/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A32A-0001-SM-7MD4W C1 Blood Whole Blood 0013756 505 BP-52853 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/16/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A32A-0006-SM-7PC1Y C1 9 Blood Whole Blood 0013756 505 BP-52943 RNA isolation_PAXgene Blood RNA (Manual) 05/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.974271 497973 0.977182 0.97713 0.762648 19035 1 76 0.00339072 127 0 9.45272e+07 0.0219193 172385 9.67397e+07 1.47301e+07 19051 4.69493e+07 0 0.214534 0.97713 0.745206 9.45272e+07 0.00475036 2.1753e+07 1.04417e+08 2.17761e+07 153 2.18753e+07 2.15989e+07 0.00406855 2.19375e+07 50.071 0.00178195 0.979988 0 50.0265 GTEX-1A32A-0008-SM-EAZD9 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 669 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993155 501949 0.984401 0.994158 0.869346 20272 1 76 0.00167108 291 0 1.03955e+08 0.0152726 181283 1.04566e+08 7.66172e+06 20285 5.18148e+07 0 0.115055 0.994158 0.864268 1.03955e+08 0.00257157 2.35291e+07 8.68885e+06 2.36067e+07 275 2.36338e+07 2.7648e+07 0.00212087 2.36041e+07 49.9686 0.00173367 0.995162 0 50.0823 GTEX-1A32A-0011-R1a-SM-7P8SQ C1, A1 6.3 Brain Brain - Hippocampus 0001954 529 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.919699 348769 0.965569 0.957148 0.84151 21751 1 76 0.00420846 197 0 7.17372e+07 0.0342326 8.37688e+06 7.4949e+07 1.14603e+07 21765 3.43541e+07 0 0.124059 0.957148 0.805449 7.17372e+07 0.00997239 1.55016e+07 2.26268e+07 1.48043e+07 218 1.59105e+07 4.58774e+06 0.00697767 1.67357e+07 51.2639 0.111768 0.994596 0 48.8495 GTEX-1A32A-0011-R9b-SM-7MGXD C1, A1 5.7 Brain Brain - Spinal cord (cervical c-1) 0006469 529 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991785 301252 0.956908 0.994097 0.825951 21628 1 76 0.00258443 180 0 6.43527e+07 0.0427815 1.95556e+06 6.47348e+07 5.07357e+06 21647 3.2044e+07 0 0.130957 0.994097 0.821076 6.43527e+07 0.00338811 1.41583e+07 1.08329e+07 1.44033e+07 177 1.42935e+07 8.38372e+06 0.00298534 1.44066e+07 50.197 0.0302089 0.996409 0 50.4289 GTEX-1A32A-0126-SM-718B1 1 C1 6 pieces; generally well trimmed except for deep 1 mm focus of fat in 1 and large blood vessels in another piece [arrowed]; 10-20% dermal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 668 877 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.96496 344765 0.973469 0.979401 0.79374 26165 1 76 0.00251755 387 0 1.12093e+08 0.026241 469123 1.1445e+08 5.50610e+06 26210 5.50211e+07 0 0.179728 0.979401 0.77739 1.12093e+08 0.00557558 2.42715e+07 1.15231e+07 2.42658e+07 335 2.50816e+07 1.89988e+07 0.00402402 2.50613e+07 49.9797 0.00409893 0.993843 0 49.9941 GTEX-1A32A-0226-SM-718B2 1 C1 2 pieces; 5% fibrovascular content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 671 874 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.972466 263936 0.974306 0.982878 0.769953 24947 1 76 0.00250835 281 0 1.16508e+08 0.0252915 523488 1.18538e+08 5.61191e+06 24989 5.74032e+07 0 0.204353 0.982878 0.75677 1.16508e+08 0.00498186 2.53989e+07 1.13293e+07 2.53016e+07 330 2.59413e+07 1.9319e+07 0.003732 2.59282e+07 49.9875 0.00441622 0.99329 0 49.904 GTEX-1A32A-0326-SM-718B3 1 C1 2 pieces: 30% external fat on 1 7.5 Nerve Nerve - Tibial 0001323 672 874 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.971314 271247 0.968535 0.982572 0.745162 24950 1 76 0.00252786 214 0 9.21784e+07 0.0311209 224262 9.38134e+07 4.23617e+06 24998 4.53916e+07 0 0.223373 0.982572 0.732175 9.21784e+07 0.0051811 2.00816e+07 8.20269e+06 2.00051e+07 204 2.05472e+07 1.47267e+07 0.00383928 2.05567e+07 50.0116 0.00239051 0.99383 0 49.9045 GTEX-1A32A-0426-SM-7939P 1 C1 2 pieces: focal medial calcification in 1; mild fibrous intimal thickening 7.6 Blood Vessel Artery - Tibial 0007610 673 873 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992343 319050 0.973977 0.993213 0.809899 20563 1 76 0.0021765 131 0 6.00718e+07 0.0256407 222648 6.04823e+07 4.96464e+06 20581 2.98622e+07 0 0.164079 0.993213 0.804402 6.00718e+07 0.002838 1.302e+07 4.84732e+06 1.29949e+07 146 1.30936e+07 1.10754e+07 0.00250696 1.29727e+07 49.7681 0.00368121 0.994084 0 49.9518 GTEX-1A32A-0526-SM-731B9 1 C1 2 pieces; minimal internal fat 8.5 Muscle Muscle - Skeletal 0011907 677 870 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991832 219953 0.984237 0.993707 0.86856 19841 1 76 0.00259475 155 0 7.52278e+07 0.0155207 430595 7.57042e+07 3.22272e+06 19849 3.74612e+07 0 0.115676 0.993707 0.863095 7.52278e+07 0.00298762 1.62871e+07 6.07310e+06 1.64578e+07 173 1.64702e+07 1.60569e+07 0.00279082 1.64005e+07 49.8939 0.00568786 0.995583 0 50.2607 GTEX-1A32A-0626-SM-731AQ 1 C1 6 pieces; well trimmed; 5-10% dermal fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 679 868 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990068 199572 0.977138 0.991802 0.788569 23878 1 76 0.00307866 179 0 8.40344e+07 0.0225505 264977 8.4729e+07 4.07542e+06 23911 4.17917e+07 0 0.188568 0.991802 0.782105 8.40344e+07 0.00347661 1.86157e+07 7.31852e+06 1.86836e+07 195 1.87152e+07 1.45815e+07 0.00327729 1.87238e+07 50.0115 0.00312735 0.993537 0 50.0911 GTEX-1A32A-0726-SM-731D4 1 C1 2 pieces; emphysema; focal vascular congestion & hemorrhage 8.7 Lung Lung 0008952 697 851 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990569 198836 0.973255 0.992226 0.775671 23551 1 76 0.00315799 145 0 7.1506e+07 0.0261982 190686 7.20663e+07 3.28153e+06 23590 3.55698e+07 0 0.197584 0.992226 0.769641 7.1506e+07 0.00338086 1.58408e+07 5.75704e+06 1.59464e+07 152 1.59923e+07 1.29501e+07 0.00326924 1.59057e+07 49.8643 0.00264598 0.993882 0 50.166 GTEX-1A32A-0826-SM-72D5C 1 C1 2 pieces; moderate [40%] macrovesicular steatosis mainly in central zones 6.7 Liver Liver 0001114 702 846 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990782 132215 0.981469 0.992588 0.832716 19961 1 76 0.00257366 153 0 7.23821e+07 0.0183763 867653 7.29226e+07 4.02347e+06 19972 3.60283e+07 0 0.148753 0.992588 0.826544 7.23821e+07 0.0036751 1.61426e+07 6.93202e+06 1.62258e+07 183 1.62576e+07 1.17512e+07 0.00312338 1.62339e+07 49.9636 0.0118983 0.994393 0 50.1286 GTEX-1A32A-0926-SM-718AB 0 C1 2 pieces; 5% fibrovascular content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 703 846 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.972439 447163 0.978566 0.982818 0.802016 24501 1 76 0.00240668 281 0 1.17922e+08 0.0210392 260210 1.19983e+08 5.52368e+06 24539 5.81431e+07 0 0.17655 0.982818 0.788236 1.17922e+08 0.00480683 2.56766e+07 1.23307e+07 2.57296e+07 318 2.64038e+07 2.3751e+07 0.00359408 2.62031e+07 49.8092 0.00216872 0.993198 0 50.0516 GTEX-1A32A-1326-SM-73KWW 1 C1 2 pieces; 20% internal fibrofatty content 7.2 Heart Heart - Atrial Appendage 0006631 712 839 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994417 309748 0.981949 0.995488 0.795443 21347 1 76 0.00241322 197 0 8.62558e+07 0.0177899 1.93192e+06 8.66467e+07 8.26838e+06 21370 4.29929e+07 0 0.186506 0.995488 0.791855 8.62558e+07 0.00289418 1.85752e+07 8.08229e+06 1.86889e+07 214 1.87307e+07 1.42846e+07 0.00265344 1.86153e+07 49.8456 0.0222966 0.99656 0 50.1526 GTEX-1A32A-1726-SM-731BW 1 C1 2 pieces; mild eccentric fibrotic plaques up to 0.6 mm 6.8 Blood Vessel Artery - Coronary 0001621 723 830 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989073 153993 0.974376 0.990426 0.785504 22538 1 76 0.00304247 145 0 7.27122e+07 0.0252957 120247 7.34151e+07 3.946e+06 22566 3.61334e+07 0 0.188871 0.990426 0.777984 7.27122e+07 0.00333404 1.58224e+07 5.62102e+06 1.58587e+07 164 1.58934e+07 1.28365e+07 0.00318806 1.58831e+07 49.9837 0.00163791 0.991779 0 50.0573 GTEX-1A32A-1826-SM-72D5G 1 C1 6 pieces; surface sloughing; reactive squamous thickening consistent with gastric reflux 8 Esophagus Esophagus - Mucosa 0006920 727 827 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122 11/06/2014 TruSeq.v1 RNASEQ 0.994772 140308 0.97268 0.995376 0.803872 21193 1 76 0.00241575 125 0 5.97288e+07 0.0270538 152386 6.00062e+07 2.7934e+06 21211 2.97911e+07 0 0.168808 0.995376 0.800155 5.97288e+07 0.00307441 1.33391e+07 6.71892e+06 1.33933e+07 140 1.33785e+07 1.07441e+07 0.00274488 1.33908e+07 50.023 0.0025395 0.99598 0 50.1014 GTEX-1A32A-2026-SM-718AY 1 C1 6 pieces; well trimmed muscularis 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 730 825 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.963227 275041 0.967132 0.977492 0.776093 24140 1 76 0.00252625 167 0 8.86317e+07 0.0326186 554518 9.06726e+07 4.88035e+06 24173 4.34326e+07 0 0.191039 0.977492 0.758625 8.86317e+07 0.00560206 1.89739e+07 8.05992e+06 1.88979e+07 202 1.95331e+07 1.4014e+07 0.00404171 1.95549e+07 50.0279 0.00611561 0.991757 0 49.8997 GTEX-1A32A-2126-SM-718AZ 2 C1 2 pieces: 1 well trimmed, other with 20% external fat 6.2 Adrenal Gland Adrenal Gland 0002369 732 825 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.961751 516642 0.968821 0.978127 0.780388 22699 1 76 0.00251409 370 0 1.09527e+08 0.0308536 3.80413e+06 1.11977e+08 5.10924e+06 22731 5.36626e+07 0 0.188434 0.978127 0.763319 1.09527e+08 0.00584787 2.31724e+07 1.49867e+07 2.33311e+07 351 2.42017e+07 1.20028e+07 0.00415307 2.39178e+07 49.7051 0.0339725 0.994504 0 50.1707 GTEX-1A32A-2626-SM-73KX9 2 C1 6 pieces; well dissected muscularis 7.2 Colon Colon - Sigmoid 0001159 746 813 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993381 246128 0.965528 0.994479 0.772964 22776 1 76 0.00265135 162 0 7.90754e+07 0.0342334 401763 7.95144e+07 7.8296e+06 22809 3.93947e+07 0 0.192564 0.994479 0.768697 7.90754e+07 0.00323387 1.69761e+07 7.90436e+06 1.70571e+07 181 1.70588e+07 1.27388e+07 0.00294229 1.70611e+07 50.0032 0.00505271 0.995577 0 50.1191 GTEX-1A32A-2726-SM-73KVU 1 C1 2 pieces; atrophic with thin (1-1.6 mm) outer rim of parenchyma; inner core is largely fibrovascular and corpora albicantia 7.2 Ovary Ovary 0000992 754 805 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991632 204834 0.972329 0.992461 0.712726 24362 1 76 0.00408223 178 0 9.77849e+07 0.0273662 82718 9.85277e+07 4.37432e+06 24418 4.86764e+07 0 0.259603 0.992461 0.707353 9.77849e+07 0.00395705 2.15834e+07 1.02692e+07 2.17033e+07 183 2.17157e+07 1.78073e+07 0.00401969 2.16592e+07 49.9348 0.00083954 0.993289 0 50.1386 GTEX-1A32A-2826-SM-72D5S 1 C1 2 pieces; largely vascularized myometrium with no endometrium in these cuts 6.8 Uterus Uterus 0000995 756 804 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.989792 114162 0.967959 0.991162 0.726616 23016 1 76 0.00280074 150 0 7.69156e+07 0.0317482 69420 7.76015e+07 4.3941e+06 23055 3.82513e+07 0 0.241342 0.991162 0.720194 7.69156e+07 0.00371447 1.68179e+07 7.02639e+06 1.68268e+07 159 1.68628e+07 1.25689e+07 0.00325697 1.68875e+07 50.0365 0.000894571 0.992532 0 50.0132 GTEX-1A32A-3026-SM-72D61 2 C1 4 pieces 5.9 Brain Brain - Cerebellum 0002037 765 796 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122 11/06/2014 TruSeq.v1 EXCLUDE 0.991534 3.60514e+06 0.912658 0.992329 0.691658 32743 1 76 0.00258885 541 0 4.50225e+08 0.0868624 1.52023e+07 4.53705e+08 2.30348e+07 32934 2.24284e+08 0 0.221 0.992329 0.686353 4.50225e+08 0.00333708 9.37061e+07 2.00349e+08 9.5204e+07 573 9.48433e+07 3.7683e+07 0.00296267 9.44931e+07 49.9075 0.0335071 0.993123 0 50.3965 GTEX-1A32A-3226-SM-731FA 2 C1 1 piece; mostly anterior lobe; no neurohypophysis in this cut 6.6 Pituitary Pituitary 0000007 772 789 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990907 331896 0.960161 0.992831 0.776983 23290 1 76 0.00338568 119 0 5.81635e+07 0.03967 312492 5.85835e+07 7.21373e+06 23310 2.89305e+07 0 0.183178 0.992831 0.771413 5.81635e+07 0.00407492 1.26107e+07 7.74983e+06 1.27573e+07 142 1.28214e+07 7.36583e+06 0.00372964 1.26528e+07 49.6691 0.00533413 0.994755 0 50.2889 GTEX-1A3MV-0002-SM-7J39R B1 Blood Whole Blood 0013756 -195 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A3MV-0002-SM-7MD4O B1 Blood Whole Blood 0013756 -195 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A3MV-0005-SM-7PC1O B1 8.7 Blood Whole Blood 0013756 -195 BP-52943 RNA isolation_PAXgene Blood RNA (Manual) 05/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.961307 1.93268e+06 0.955576 0.965052 0.792502 19746 1 76 0.00388149 115 0 7.88878e+07 0.0433835 274573 8.17446e+07 1.22162e+07 19760 3.87725e+07 0 0.163074 0.965052 0.764806 7.88878e+07 0.00564861 1.73714e+07 8.38585e+07 1.7471e+07 131 1.83873e+07 1.76997e+07 0.00476162 1.67637e+07 47.6906 0.00335891 0.968797 0 50.1429 GTEX-1A3MV-0008-SM-EAZDA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 365 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992717 522562 0.983446 0.99381 0.862609 20736 1 76 0.00172932 225 0 9.71902e+07 0.016241 232519 9.77956e+07 7.30419e+06 20753 4.84307e+07 0 0.120837 0.99381 0.857269 9.71902e+07 0.00291183 2.20164e+07 8.01734e+06 2.20751e+07 229 2.21128e+07 2.544e+07 0.00231992 2.20838e+07 49.9671 0.0023776 0.994904 0 50.0666 GTEX-1A3MV-0126-SM-731FQ 0 B1 2 pieces 8 Spleen Spleen 0002106 211 608 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.988516 299578 0.961414 0.990435 0.757592 23164 1 76 0.00456775 107 0 5.46274e+07 0.0348036 222882 5.51549e+07 6.76020e+06 23190 2.70661e+07 0 0.203822 0.990435 0.750345 5.46274e+07 0.00509664 1.20674e+07 1.04032e+07 1.21153e+07 114 1.22041e+07 8.3543e+06 0.00483168 1.20781e+07 49.7406 0.00404102 0.992353 0 50.0991 GTEX-1A3MV-0226-SM-731FS 1 B1 2 pieces; both include 50-60% attached fat/connective tissue with some inflammatory cells 8.5 Adrenal Gland Adrenal Gland 0002369 215 604 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.991648 328932 0.975563 0.993914 0.809584 21900 1 76 0.00317534 112 0 5.68091e+07 0.0240909 739401 5.7157e+07 6.64263e+06 21919 2.82584e+07 0 0.165979 0.993914 0.804657 5.68091e+07 0.00374054 1.25527e+07 5.90636e+06 1.26416e+07 133 1.27165e+07 8.6251e+06 0.00345729 1.25921e+07 49.7543 0.0129363 0.99618 0 50.1764 GTEX-1A3MV-0326-SM-73KW7 1 B1 2 pieces; one piece includes ~10% fat/fibrous/vascular tissue, second includes ~30% fat/vascular/skeletal muscle (contaminating elements marked) 6.9 Thyroid Thyroid 0002046 220 599 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990417 246662 0.967253 0.991507 0.755268 24940 1 76 0.00415603 203 0 9.6651e+07 0.0323081 184440 9.74789e+07 4.44478e+06 24989 4.80902e+07 0 0.211985 0.991507 0.748854 9.6651e+07 0.0043386 2.11743e+07 9.32143e+06 2.13209e+07 215 2.13422e+07 1.44227e+07 0.00424721 2.12546e+07 49.8972 0.0018921 0.992598 0 50.1725 GTEX-1A3MV-0426-SM-73KXL 1 B1 6 pieces 7.5 Blood Vessel Artery - Aorta 0001496 223 596 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993834 278680 0.976007 0.995031 0.827246 21701 1 76 0.00259679 147 0 7.11973e+07 0.0235996 189562 7.15528e+07 7.09469e+06 21723 3.54765e+07 0 0.14876 0.995031 0.823136 7.11973e+07 0.00319871 1.53848e+07 5.36531e+06 1.54618e+07 161 1.54839e+07 1.37297e+07 0.00289739 1.5447e+07 49.9404 0.00264926 0.996228 0 50.1247 GTEX-1A3MV-0526-SM-72D5A 0 B1 2 pieces; includes pleura, atelectasis with patchy widened airspaces, bronchopneumonia, pulmonary macrophages, portion of bronchus/cartilage 8 Lung Lung 0008952 229 590 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992356 128175 0.971387 0.993714 0.777642 23932 1 76 0.00284151 135 0 6.95582e+07 0.0282023 230607 6.99982e+07 3.72172e+06 23969 3.46445e+07 0 0.193746 0.993714 0.772754 6.95582e+07 0.00345341 1.54214e+07 5.80499e+06 1.55207e+07 153 1.55357e+07 1.17858e+07 0.00314704 1.5496e+07 49.9361 0.00329447 0.995072 0 50.1606 GTEX-1A3MV-0626-SM-731CH 0 B1 2 pieces; mature fat 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 236 583 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989382 133742 0.973102 0.991011 0.802938 22266 1 76 0.00289721 148 0 6.86241e+07 0.0266129 314250 6.92466e+07 3.82486e+06 22290 3.41195e+07 0 0.170164 0.991011 0.79572 6.86241e+07 0.00335441 1.50807e+07 5.72847e+06 1.51623e+07 165 1.51823e+07 1.12829e+07 0.00312544 1.51667e+07 49.9743 0.00453813 0.99264 0 50.1349 GTEX-1A3MV-0726-SM-72D5M 1 B1 2 pieces; spermatogenesis is present 7.2 Testis Testis 0000473 258 561 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.991677 198778 0.925482 0.99281 0.721337 32194 1 76 0.00266997 150 0 7.34125e+07 0.0741899 509489 7.39442e+07 3.89574e+06 32251 3.65797e+07 0 0.204145 0.99281 0.71615 7.34125e+07 0.00314633 1.52363e+07 9.63455e+06 1.52958e+07 141 1.53524e+07 1.27387e+07 0.00290788 1.52503e+07 49.8332 0.00689019 0.993944 0 50.0975 GTEX-1A3MV-0826-SM-72D6J 1 B1 2 pieces; includes small portion of seminal vesicle 6 Prostate Prostate 0002367 271 548 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.987821 184553 0.958948 0.98896 0.735517 25359 1 76 0.00287627 164 0 7.98981e+07 0.0408384 474063 8.079e+07 5.56503e+06 25400 3.96962e+07 0 0.223432 0.98896 0.727397 7.98981e+07 0.00384377 1.74505e+07 7.89394e+06 1.75269e+07 187 1.76006e+07 9.76111e+06 0.00335946 1.7467e+07 49.8095 0.00586784 0.9901 0 50.1092 GTEX-1A3MV-1026-SM-72D5U 0 B1 6 pieces; target muscularis 5.9 Colon Colon - Sigmoid 0001159 280 539 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.990906 92370 0.968229 0.992687 0.767207 23005 1 76 0.00251821 112 0 5.29665e+07 0.0313377 190345 5.33567e+07 3.54177e+06 23036 2.63748e+07 0 0.201022 0.992687 0.761596 5.29665e+07 0.00354858 1.15562e+07 4.62177e+06 1.15974e+07 127 1.15888e+07 7.26396e+06 0.00303247 1.16526e+07 50.1374 0.0035674 0.994468 0 50.0889 GTEX-1A3MV-1126-SM-718BS 1 B1 6 pieces; full thickness sections, few with minimal attached fat 7.4 Colon Colon - Transverse 0001157 287 532 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967203 299081 0.971396 0.980871 0.79415 24836 1 76 0.00242931 212 0 9.59224e+07 0.0283351 502779 9.7793e+07 4.65294e+06 24873 4.71377e+07 0 0.177246 0.980871 0.778959 9.59224e+07 0.00529076 2.06856e+07 8.54011e+06 2.06787e+07 251 2.13171e+07 1.49216e+07 0.0038401 2.13049e+07 49.9856 0.00514126 0.99454 0 49.9916 GTEX-1A3MV-1226-SM-718BW 1 B1 6 pieces; full thickness sections 7 Stomach Stomach 0000945 291 528 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.961688 318075 0.975624 0.977318 0.809849 24870 1 76 0.00252362 414 0 1.10839e+08 0.024077 964495 1.13411e+08 5.201e+06 24907 5.43783e+07 0 0.165774 0.977318 0.79148 1.10839e+08 0.00579851 2.46321e+07 4.64309e+07 2.46753e+07 342 2.5608e+07 2.04286e+07 0.00413488 2.54369e+07 49.8324 0.00850442 0.992948 0 50.0438 GTEX-1A3MV-1326-SM-7LG6C 0 B1 6 pieces 9.8 Esophagus Esophagus - Mucosa 0006920 301 518 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6682 03/22/2015 TruSeq.v1 RNASEQ 0.977626 655526 0.978562 0.985088 0.833283 23942 1 76 0.00338116 289 0 1.20729e+08 0.0209152 439034 1.22557e+08 1.72112e+07 23972 5.96959e+07 0 0.145279 0.985088 0.820857 1.20729e+08 0.00570598 2.70614e+07 1.9996e+07 2.7268e+07 289 2.77594e+07 2.49619e+07 0.00453476 2.74464e+07 49.7165 0.0035823 0.99255 0 50.1901 GTEX-1A3MV-1426-SM-72D63 0 B1 6 pieces; target muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 299 520 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993081 156774 0.975966 0.994375 0.834878 21959 1 76 0.00256536 165 0 7.63964e+07 0.0237758 481195 7.68285e+07 3.96742e+06 21979 3.80579e+07 0 0.141088 0.994375 0.830182 7.63964e+07 0.00329366 1.65724e+07 6.77055e+06 1.67617e+07 195 1.67207e+07 1.25356e+07 0.00292903 1.67098e+07 49.9837 0.00626324 0.99567 0 50.2839 GTEX-1A3MV-1526-SM-731BO 0 B1 6 pieces; target muscularis 7.8 Esophagus Esophagus - Muscularis 0004648 306 513 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991474 163642 0.97674 0.993283 0.840472 21633 1 76 0.00286049 139 0 6.55661e+07 0.022975 353106 6.60094e+07 3.01937e+06 21649 3.26375e+07 0 0.136268 0.993283 0.834826 6.55661e+07 0.00319201 1.41339e+07 5.06296e+06 1.43295e+07 156 1.43243e+07 1.12978e+07 0.00302595 1.42482e+07 49.8668 0.00534933 0.995092 0 50.3436 GTEX-1A3MV-1626-SM-731C1 0 B1 2 pieces; predominantly fat, 1 piece has small portion fibrocollagenous stroma (<10%) 6.8 Breast Breast - Mammary Tissue 0008367 312 507 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990126 163556 0.969856 0.991863 0.757446 24002 1 76 0.00290503 151 0 7.3301e+07 0.0298803 288409 7.39023e+07 3.50858e+06 24040 3.64607e+07 0 0.21241 0.991863 0.751283 7.3301e+07 0.0033085 1.60969e+07 5.92531e+06 1.61975e+07 165 1.62225e+07 1.10335e+07 0.00310641 1.61898e+07 49.9496 0.00390257 0.9936 0 50.1558 GTEX-1A3MV-1726-SM-72D68 0 B1 2 pieces; salivary gland elements with mild chronic inflammation, 1 piece is ~80% salivary gland with 20% stroma/skeletal muscle, 2nd is only ~10% gland with stroma, lip, skeletal muscle 7.8 Salivary Gland Minor Salivary Gland 0006330 323 496 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.987353 144154 0.977652 0.988433 0.834952 21842 1 76 0.00311392 172 0 7.22486e+07 0.0201777 89265 7.30941e+07 3.85523e+06 21857 3.59119e+07 0 0.1427 0.988433 0.825294 7.22486e+07 0.00371873 1.66895e+07 2.46131e+07 1.68420e+07 193 1.68773e+07 1.16686e+07 0.003416 1.67324e+07 49.7844 0.00122123 0.989513 0 50.2275 GTEX-1A3MV-1826-SM-731CD 0 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 336 483 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990693 168065 0.971875 0.992297 0.799709 23987 1 76 0.00294563 199 0 8.14886e+07 0.0279306 751235 8.21212e+07 3.99104e+06 24012 4.05424e+07 0 0.172166 0.992297 0.793549 8.14886e+07 0.00333024 1.7984e+07 8.11027e+06 1.81366e+07 206 1.81366e+07 1.24981e+07 0.00313762 1.81104e+07 49.9639 0.00914788 0.993901 0 50.2112 GTEX-1A3MV-1926-SM-718BT 1 B1 6 pieces; predominantly well trimmed with up to 5-10% internal/external fat. epidermis measures 53 micorns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 365 454 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968708 299970 0.972163 0.981622 0.804588 25688 1 76 0.00241251 286 0 1.08363e+08 0.0275657 681433 1.10392e+08 4.99314e+06 25722 5.33156e+07 0 0.167575 0.981622 0.789802 1.08363e+08 0.00518404 2.35469e+07 1.11649e+07 2.35708e+07 324 2.42562e+07 1.86817e+07 0.00378005 2.42422e+07 49.9856 0.00617284 0.994536 0 50.0254 GTEX-1A3MV-2026-SM-718BU 0 B1 2 pieces; skeletal muscle with ~ 5 and 20% internal/external fat 8 Muscle Muscle - Skeletal 0011907 377 442 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.971052 374575 0.98241 0.983302 0.873283 21354 1 76 0.00229329 382 0 1.17053e+08 0.0173801 1.74602e+06 1.1904e+08 5.28779e+06 21371 5.76607e+07 0 0.109126 0.983302 0.858701 1.17053e+08 0.00499208 2.54439e+07 1.46121e+07 2.56514e+07 344 2.63325e+07 2.0604e+07 0.00362588 2.61093e+07 49.7872 0.0146675 0.995552 0 50.2031 GTEX-1A3MV-2126-SM-718BV 0 B1 2 pieces; mature fat with ~5-10% fibrous tissue 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 379 440 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967561 290153 0.974976 0.980806 0.790137 25115 1 76 0.00245741 283 0 1.08803e+08 0.0246922 387143 1.10933e+08 5.16171e+06 25159 5.35022e+07 0 0.184838 0.980806 0.774971 1.08803e+08 0.00535621 2.37372e+07 1.03509e+07 2.37137e+07 282 2.44219e+07 1.97446e+07 0.00388724 2.44458e+07 50.0245 0.00348989 0.994051 0 49.9752 GTEX-1A3MV-2226-SM-731CP 1 B1 2 pieces 7.2 Blood Vessel Artery - Tibial 0007610 381 438 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989977 122225 0.977223 0.991579 0.877622 19285 1 76 0.00278885 147 0 6.65179e+07 0.0223833 362325 6.70828e+07 3.46282e+06 19295 3.30834e+07 0 0.0996012 0.991579 0.870231 6.65179e+07 0.00322143 1.41417e+07 5.3361e+06 1.42866e+07 162 1.42518e+07 1.36878e+07 0.00300479 1.42737e+07 50.0383 0.00540116 0.993181 0 50.2548 GTEX-1A3MV-2326-SM-731CT 1 B1 2 pieces; ~10% external rim of fat 6.1 Nerve Nerve - Tibial 0001323 382 437 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.991627 141140 0.966828 0.99357 0.746787 23569 1 76 0.00196361 179 0 7.19787e+07 0.0328987 322846 7.24446e+07 3.18348e+06 23604 3.58072e+07 0 0.220041 0.99357 0.741984 7.19787e+07 0.00229556 1.58162e+07 5.53859e+06 1.5896e+07 171 1.59078e+07 1.05318e+07 0.00212926 1.59301e+07 50.0351 0.00445646 0.995512 0 50.1258 GTEX-1A3MW-0004-SM-7J39Q C1 Blood Whole Blood 0013756 653 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6780,LCSET-7006 03/30/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A3MW-0004-SM-7MD4N C1 Blood Whole Blood 0013756 653 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A3MW-0006-SM-7MKGU C1 8.4 Blood Whole Blood 0013756 653 BP-52943 RNA isolation_PAXgene Blood RNA (Manual) 05/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.978903 351101 0.981921 0.982232 0.829551 18462 1 76 0.00372167 121 0 7.95883e+07 0.0171573 408589 8.1028e+07 9.92511e+06 18469 3.95236e+07 0 0.152371 0.982232 0.814811 7.95883e+07 0.00502602 1.84412e+07 7.71262e+07 1.84308e+07 139 1.85294e+07 1.96634e+07 0.00437163 1.86191e+07 50.1207 0.00504257 0.985561 0 49.9859 GTEX-1A3MW-0008-SM-EAZDC C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 706 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993024 498492 0.98396 0.994019 0.859135 20807 1 76 0.00170965 289 0 1.00374e+08 0.0157003 270508 1.00978e+08 7.66966e+06 20825 5.00257e+07 0 0.124825 0.994019 0.853997 1.00374e+08 0.00259008 2.27055e+07 8.88143e+06 2.27637e+07 265 2.27754e+07 2.62184e+07 0.00214942 2.27904e+07 50.0164 0.00267889 0.995015 0 50.064 GTEX-1A3MW-0126-SM-73KXX 1 C1 6 pieces; well trimmed; dermal fat <5% 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 705 1126 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993263 247440 0.974878 0.994401 0.74149 23308 1 76 0.00262563 158 0 7.57633e+07 0.0248809 259860 7.61898e+07 6.63046e+06 23343 3.77415e+07 0 0.233388 0.994401 0.737339 7.57633e+07 0.00318809 1.68967e+07 7.33266e+06 1.68908e+07 159 1.69145e+07 1.32523e+07 0.00290654 1.69623e+07 50.0705 0.00341069 0.99554 0 49.9912 GTEX-1A3MW-0226-SM-7939O 1 C1 2 pieces; 5% fibrovascular content 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 707 1124 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991455 234415 0.97466 0.991958 0.756123 21610 1 76 0.00240091 125 0 5.59704e+07 0.0250423 162015 5.64242e+07 6.07443e+06 21635 2.77943e+07 0 0.218538 0.991958 0.750042 5.59704e+07 0.00295389 1.23889e+07 5.10057e+06 1.22997e+07 128 1.24289e+07 9.59622e+06 0.00267726 1.22887e+07 49.7163 0.00287137 0.99246 0 49.8193 GTEX-1A3MW-0326-SM-731EF 1 C1 2 pieces; 20% internal and external fat content 7.4 Nerve Nerve - Tibial 0001323 708 1124 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.98918 313424 0.969451 0.991733 0.728116 23293 1 76 0.00312161 151 0 6.53512e+07 0.0302088 145099 6.58959e+07 7.82207e+06 23327 3.24636e+07 0 0.241335 0.991733 0.722096 6.53512e+07 0.00396076 1.44098e+07 6.08893e+06 1.43927e+07 138 1.44957e+07 1.04749e+07 0.0035401 1.44627e+07 49.9431 0.00220194 0.994286 0 49.9703 GTEX-1A3MW-0426-SM-731AI 1 C1 2 pieces; foci of intimal & medial calcification; well trimmed 7.7 Blood Vessel Artery - Tibial 0007610 709 1123 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.986969 249859 0.975552 0.988917 0.813222 21346 1 76 0.00288346 146 0 7.04216e+07 0.0240877 249525 7.12108e+07 3.01961e+06 21365 3.50271e+07 0 0.16233 0.988917 0.80421 7.04216e+07 0.00327899 1.53474e+07 5.21234e+06 1.5477e+07 156 1.5512e+07 1.35323e+07 0.00308084 1.5442e+07 49.8869 0.00350403 0.990866 0 50.2101 GTEX-1A3MW-0526-SM-731BY 1 C1 2 pieces; focal atrophy; 10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 711 1122 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991769 257728 0.979326 0.993642 0.860156 19923 1 76 0.00260332 162 0 7.00302e+07 0.0204336 523209 7.04783e+07 3.03609e+06 19937 3.48639e+07 0 0.11917 0.993642 0.854687 7.00302e+07 0.00295092 1.52845e+07 6.70566e+06 1.54734e+07 169 1.54831e+07 1.41356e+07 0.00277679 1.53923e+07 49.853 0.00742369 0.995514 0 50.3072 GTEX-1A3MW-0626-SM-731CB 1 C1 6 pieces; up to 20% dermal fat in 3 of 6 pieces 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 713 1120 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.991123 169652 0.974909 0.993432 0.766735 22742 1 76 0.00192893 144 0 6.46851e+07 0.0248673 265773 6.51128e+07 2.51943e+06 22764 3.21863e+07 0 0.208174 0.993432 0.761699 6.46851e+07 0.00239413 1.43234e+07 6.06262e+06 1.44183e+07 147 1.44493e+07 1.17593e+07 0.00216099 1.44297e+07 49.9661 0.00408173 0.995742 0 50.1651 GTEX-1A3MW-0826-SM-72D6C 1 C1 2 pieces; polymorphs, mesothelial cells and fibrin on surface, especially on 1 piece, consistent with ascites (clinical history) 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 716 1118 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.991901 145077 0.976826 0.993007 0.726044 22012 1 76 0.00281787 146 0 7.55215e+07 0.0228052 308648 7.60533e+07 3.65719e+06 22038 3.76095e+07 0 0.250782 0.993007 0.720967 7.55215e+07 0.00336835 1.6601e+07 9.93335e+06 1.67201e+07 155 1.67112e+07 1.26208e+07 0.0030928 1.66948e+07 49.9754 0.00405831 0.994113 0 50.1787 GTEX-1A3MW-1326-SM-7189P 1 C1 2 pieces; 1.5mm area of fibrous scar [marked] 7 Heart Heart - Left Ventricle 0006566 729 1109 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968472 285550 0.979334 0.981753 0.84264 22690 1 76 0.00218464 369 0 1.07847e+08 0.0205469 6.51689e+06 1.09851e+08 5.00126e+06 22708 5.30551e+07 0 0.136694 0.981753 0.827264 1.07847e+08 0.00505132 2.38978e+07 1.49477e+07 2.386e+07 346 2.47017e+07 1.12826e+07 0.00359859 2.43638e+07 49.6556 0.0593247 0.995034 0 49.9604 GTEX-1A3MW-1926-SM-7IGM8 2 C1 2 pieces; moderate increase in fibrous tissue 6.2 Pancreas Pancreas 0001150 737 1105 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994451 213923 0.972652 0.995313 0.801984 21642 1 76 0.00203594 129 0 6.64963e+07 0.0271932 316784 6.68095e+07 4.18376e+06 21658 3.31532e+07 0 0.170668 0.995313 0.798225 6.64963e+07 0.00279828 1.49728e+07 9.39744e+06 1.51106e+07 142 1.51513e+07 1.34421e+07 0.00241678 1.49989e+07 49.7472 0.0047416 0.996175 0 50.2289 GTEX-1A3MW-2126-SM-731DO 2 C1 2 pieces; well trimmed except for a 1.7mm of external nodule of fat 5.9 Adrenal Gland Adrenal Gland 0002369 740 1103 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990353 373818 0.965867 0.992301 0.79169 21890 1 76 0.00330174 136 0 5.99252e+07 0.0339998 2.29866e+06 6.03901e+07 7.66092e+06 21913 2.97962e+07 0 0.174177 0.992301 0.785595 5.99252e+07 0.00394696 1.2779e+07 1.12795e+07 1.32103e+07 156 1.32898e+07 6.52406e+06 0.00362372 1.28094e+07 49.0797 0.0380635 0.994248 0 50.8298 GTEX-1A3MW-2226-SM-73KUX 2 C1 6 pieces; moderate to severe interstitial and glomerular fibrosis 6.6 Kidney Kidney - Cortex 0001225 741 1103 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988556 239771 0.971207 0.989569 0.734142 24802 1 76 0.00429876 163 0 8.69251e+07 0.0283511 1.88154e+06 8.78414e+07 4.28056e+06 24848 4.32032e+07 0 0.237065 0.989569 0.726484 8.69251e+07 0.00456015 1.93332e+07 9.25601e+06 1.94401e+07 189 1.94796e+07 1.16392e+07 0.00442932 1.93839e+07 49.8769 0.0214197 0.990582 0 50.138 GTEX-1A3MW-2526-SM-72D5P 1 C1 6 pieces; muscle intact; fibrous submucosa is up to 1.2mm thick 5.8 Colon Colon - Sigmoid 0001159 747 1098 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.985076 146964 0.960501 0.986619 0.669207 21819 1 76 0.00264863 110 0 4.97649e+07 0.0392364 245440 5.04398e+07 3.65049e+06 21855 2.4776e+07 0 0.291294 0.986619 0.660252 4.97649e+07 0.00340321 1.08533e+07 9.15572e+06 1.09e+07 115 1.08931e+07 6.60071e+06 0.00302533 1.09353e+07 50.0967 0.004866 0.988162 0 50.1074 GTEX-1A3MW-3026-SM-72D5E 2 C1 4 pieces 5.9 Brain Brain - Cerebellum 0002037 758 1090 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.990224 486060 0.954656 0.991323 0.834279 21034 1 76 0.00254809 366 0 7.75008e+07 0.0452367 7.03756e+06 7.81792e+07 4.4754e+06 21051 3.85861e+07 0 0.120377 0.991323 0.82704 7.75008e+07 0.00326102 1.67779e+07 2.78828e+07 1.73061e+07 343 1.71149e+07 3.70713e+06 0.00290416 1.70382e+07 49.8876 0.0900183 0.992422 0 50.7748 GTEX-1A3MW-3226-SM-731E1 2 C1 2 pieces; 4.7mm anterior lobe; 0.8mm posterior lobe fragment 6.8 Pituitary Pituitary 0000007 760 1089 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.98946 514021 0.957593 0.991976 0.718282 25145 1 76 0.00319386 136 0 7.33016e+07 0.0421899 517876 7.38946e+07 8.53868e+06 25188 3.64155e+07 0 0.239311 0.991976 0.712518 7.33016e+07 0.0039909 1.58559e+07 8.18238e+06 1.59168e+07 156 1.6044e+07 9.73578e+06 0.00359137 1.59006e+07 49.7755 0.00700831 0.994491 0 50.0958 GTEX-1A3MX-0002-SM-7J38V C1 Blood Whole Blood 0013756 1054 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A3MX-0002-SM-7MA69 C1 Blood Whole Blood 0013756 1054 BP-52900,BP-52916 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/19/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A3MX-0005-SM-7MGW7 C1 8.3 Blood Whole Blood 0013756 1054 BP-52943 RNA isolation_PAXgene Blood RNA (Manual) 05/19/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.977428 272305 0.981677 0.978895 0.816374 14416 1 76 0.00273089 65 0 6.22528e+07 0.0174905 134311 6.35949e+07 4.94101e+06 14419 3.10226e+07 0 0.165303 0.978895 0.799144 6.22528e+07 0.00355211 1.49252e+07 9.54816e+07 1.48538e+07 100 1.48629e+07 1.73888e+07 0.00314089 1.50168e+07 50.2576 0.00211198 0.980361 0 49.8802 GTEX-1A3MX-0008-SM-EAZDB C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1125 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992991 405301 0.983163 0.993983 0.858926 20911 1 76 0.00172281 289 0 1.04641e+08 0.0165054 300591 1.05275e+08 8.43567e+06 20934 5.21612e+07 0 0.124237 0.993983 0.853758 1.04641e+08 0.00266713 2.36253e+07 9.28085e+06 2.37436e+07 274 2.37525e+07 2.75209e+07 0.0021945 2.37153e+07 49.9608 0.0028553 0.994975 0 50.1248 GTEX-1A3MX-0011-R10b-SM-7P8PG C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 1085 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991048 461166 0.965018 0.993509 0.860364 23378 1 76 0.0032004 269 0 9.08082e+07 0.0346378 4.63406e+06 9.14014e+07 1.30617e+07 23393 4.51854e+07 0 0.104654 0.993509 0.85478 9.08082e+07 0.00425618 1.97347e+07 1.60219e+07 2.0199e+07 283 2.02152e+07 1.02711e+07 0.00372698 1.99086e+07 49.6179 0.0507001 0.995971 0 50.5813 GTEX-1A3MX-0011-R11b-SM-7DUGP C1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 1085 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.99132 827188 0.949309 0.992139 0.743787 24386 1 76 0.00304013 270 0 1.0217e+08 0.0501796 1.62675e+06 1.02979e+08 9.16956e+06 24426 5.08273e+07 0 0.205522 0.992139 0.73794 1.0217e+08 0.00419218 2.21991e+07 1.42366e+07 2.21693e+07 268 2.2383e+07 1.32854e+07 0.00361568 2.20617e+07 49.6386 0.0157969 0.992957 0 49.9664 GTEX-1A3MX-0011-R1b-SM-7P8PH C1, A1 6.2 Brain Brain - Hippocampus 0001954 1085 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.99179 464753 0.965774 0.993824 0.849777 23636 1 76 0.00338068 370 0 1.06641e+08 0.0340164 9.5695e+06 1.07303e+08 1.50708e+07 23659 5.3076e+07 0 0.115997 0.993824 0.844528 1.06641e+08 0.004203 2.29789e+07 2.547e+07 2.39422e+07 334 2.3885e+07 8.15277e+06 0.003791 2.32126e+07 49.2861 0.0891818 0.995857 0 51.0265 GTEX-1A3MX-0011-R2b-SM-7EWFL C1, A1 6.4 Brain Brain - Substantia nigra 0002038 1085 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6444,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.993895 382902 0.966384 0.995343 0.832556 24434 1 76 0.00250634 377 0 1.10063e+08 0.0333251 7.25214e+06 1.10578e+08 1.17665e+07 24462 5.48481e+07 0 0.133828 0.995343 0.828679 1.10063e+08 0.00334724 2.39773e+07 2.34985e+07 2.47811e+07 335 2.46324e+07 1.29261e+07 0.00292618 2.42576e+07 49.6167 0.065584 0.996791 0 50.8243 GTEX-1A3MX-0011-R3b-SM-79OOW C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1085 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993927 435285 0.955788 0.994263 0.836587 22943 1 76 0.00303866 155 0 6.45286e+07 0.0437599 2.54285e+06 6.4901e+07 3.57858e+06 22960 3.21432e+07 0 0.119201 0.994263 0.831787 6.45286e+07 0.00426945 1.40668e+07 1.23945e+07 1.42097e+07 176 1.42255e+07 8.34179e+06 0.00365385 1.40744e+07 49.7331 0.0391804 0.994598 0 50.2527 GTEX-1A3MX-0011-R4b-SM-7EWFK C1, A1 6.3 Brain Brain - Amygdala 0001876 1085 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993002 237354 0.967073 0.994814 0.848559 22336 1 76 0.00235274 199 0 6.70416e+07 0.0325951 3.94204e+06 6.73911e+07 5.72148e+06 22349 3.33956e+07 0 0.118514 0.994814 0.844158 6.70416e+07 0.00332888 1.47035e+07 1.26892e+07 1.49239e+07 218 1.48459e+07 7.87961e+06 0.00283992 1.48867e+07 50.0685 0.0584951 0.996625 0 50.372 GTEX-1A3MX-0011-R5a-SM-79OM5 C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 1085 BP-56838 RNA isolation_PAXgene Tissue miRNA 09/29/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976877 325279 0.960064 0.980685 0.817323 22850 1 76 0.00537589 108 0 5.47588e+07 0.0395756 2.95264e+06 5.58373e+07 1.35974e+07 22866 2.72424e+07 0 0.142741 0.980685 0.801536 5.47588e+07 0.00642021 1.19106e+07 1.17662e+07 1.20402e+07 132 1.21167e+07 6.5808e+06 0.00589602 1.20232e+07 49.8062 0.0528793 0.984493 0 50.2704 GTEX-1A3MX-0011-R6a-SM-7P8S9 C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1085 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.933631 683269 0.958619 0.964272 0.842287 24899 1 76 0.00423169 269 0 9.43422e+07 0.0410414 5.61510e+06 9.78378e+07 1.40558e+07 24916 4.55185e+07 0 0.116332 0.964272 0.812193 9.43422e+07 0.00897078 2.01328e+07 2.18827e+07 1.97263e+07 287 2.1231e+07 1.11485e+07 0.00652594 2.13296e+07 50.1159 0.057392 0.994912 0 49.4901 GTEX-1A3MX-0011-R7a-SM-7DUEM C1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 1085 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993411 427180 0.963783 0.994245 0.831063 24467 1 76 0.00279006 272 0 9.39864e+07 0.0358984 4.78076e+06 9.45305e+07 8.10817e+06 24489 4.68211e+07 0 0.13272 0.994245 0.82628 9.39864e+07 0.00401464 2.05298e+07 1.61261e+07 2.09349e+07 307 2.08967e+07 1.10472e+07 0.00340184 2.06386e+07 49.6893 0.0505737 0.995079 0 50.4885 GTEX-1A3MX-0011-R8a-SM-7P8PI C1, A1 6.7 Brain Brain - Hypothalamus 0001898 1085 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991035 535411 0.965724 0.993287 0.859399 25546 1 76 0.00298542 276 0 1.26137e+08 0.0338625 4.95067e+06 1.2699e+08 1.53012e+07 25571 6.27861e+07 0 0.106325 0.993287 0.85363 1.26137e+08 0.0043973 2.77985e+07 1.93212e+07 2.8126e+07 324 2.8172e+07 1.61233e+07 0.00368976 2.80008e+07 49.8476 0.0389847 0.995538 0 50.2928 GTEX-1A3MX-0126-SM-731BR 0 C1 6 pieces, no dermal fat, squamous epithelium is ~50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1124 1419 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990674 292751 0.976871 0.992654 0.806048 23249 1 76 0.00289516 155 0 7.53472e+07 0.0229058 377540 7.59049e+07 3.11655e+06 23274 3.75003e+07 0 0.170824 0.992654 0.800126 7.53472e+07 0.00325482 1.66652e+07 6.77197e+06 1.67982e+07 164 1.68552e+07 1.4537e+07 0.00307463 1.67487e+07 49.8415 0.00497386 0.994633 0 50.1987 GTEX-1A3MX-0226-SM-731C4 0 C1 2 pieces, fascia/vascular elements are ~15% tissue, rep delineated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 1126 1419 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990523 199721 0.977164 0.992368 0.813175 21698 1 76 0.00278149 137 0 6.4904e+07 0.0225757 262528 6.54032e+07 3.03061e+06 21717 3.22804e+07 0 0.163988 0.992368 0.806969 6.4904e+07 0.00326788 1.42947e+07 5.31957e+06 1.43619e+07 153 1.4392e+07 1.19531e+07 0.00302424 1.43782e+07 49.976 0.004014 0.994213 0 50.1171 GTEX-1A3MX-0326-SM-73KXV 0 C1 2 pieces trace adherent fat, ~0.3mm, focal 7 Nerve Nerve - Tibial 0001323 1130 1415 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993241 263146 0.965215 0.994351 0.718175 24391 1 76 0.00264121 215 0 9.20556e+07 0.034548 301124 9.25786e+07 8.72399e+06 24442 4.58598e+07 0 0.24704 0.994351 0.714118 9.20556e+07 0.0031664 2.02129e+07 8.74602e+06 2.02233e+07 211 2.02252e+07 1.34291e+07 0.00290351 2.03122e+07 50.1074 0.00325263 0.995461 0 50.0129 GTEX-1A3MX-0426-SM-72D5W 0 C1 2 pieces, focal Monckeberg sclerosis (delineated), ~50% occlusive atherosis up to ~0.4mm thick 7.2 Blood Vessel Artery - Tibial 0007610 1132 1414 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.989597 130629 0.974571 0.990775 0.792867 22644 1 76 0.00280147 142 0 7.25723e+07 0.0250706 285779 7.3248e+07 4.24075e+06 22666 3.61114e+07 0 0.181704 0.990775 0.785553 7.25723e+07 0.00355484 1.58335e+07 5.99053e+06 1.58949e+07 161 1.59076e+07 1.30392e+07 0.00317771 1.59059e+07 49.9972 0.00390153 0.991954 0 50.0969 GTEX-1A3MX-0526-SM-718A9 0 C1 2 pieces, ~10% interstitial fat/vascular elements, delineated 7.6 Muscle Muscle - Skeletal 0011907 1135 1411 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.973291 346581 0.980856 0.984299 0.858038 22236 1 76 0.00224877 382 0 1.15632e+08 0.0188987 1.22677e+06 1.17476e+08 5.14382e+06 22257 5.70344e+07 0 0.122818 0.984299 0.844566 1.15632e+08 0.00481087 2.5174e+07 1.3348e+07 2.51748e+07 332 2.58355e+07 2.39321e+07 0.0035155 2.57623e+07 49.929 0.0104427 0.995306 0 50.0008 GTEX-1A3MX-0826-SM-72D64 1 C1 2 pieces ~ 40% interstitial fibrosis/mesothelial hyperplasia, rep delineated 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1156 1392 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.986879 99736 0.975797 0.987818 0.771293 22400 1 76 0.00270181 148 0 7.44655e+07 0.0239652 458270 7.53838e+07 4.47084e+06 22434 3.70654e+07 0 0.204504 0.987818 0.761897 7.44655e+07 0.00327651 1.64287e+07 6.5065e+06 1.64652e+07 166 1.64947e+07 1.22704e+07 0.00298889 1.64716e+07 49.9651 0.00607915 0.988757 0 50.0554 GTEX-1A3MX-1026-SM-731F8 2 C1 2 pieces, spermatogenesis present but appears reduced 5.7 Testis Testis 0000473 1160 1393 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.99015 550072 0.928212 0.991948 0.718492 32412 1 76 0.00337311 142 0 7.06971e+07 0.071378 366198 7.1271e+07 8.46684e+06 32467 3.51557e+07 0 0.20972 0.991948 0.712707 7.06971e+07 0.00391151 1.44717e+07 1.13786e+07 1.44453e+07 126 1.45699e+07 1.32748e+07 0.00364182 1.44617e+07 49.8137 0.00513811 0.993747 0 49.9543 GTEX-1A3MX-1226-SM-731B3 1 C1 2 pieces, no abnormalities 7 Heart Heart - Atrial Appendage 0006631 1164 1391 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990162 230009 0.974605 0.992167 0.771085 23077 1 76 0.00299211 137 0 7.44056e+07 0.025162 1.25211e+06 7.4993e+07 3.45392e+06 23111 3.7012e+07 0 0.203519 0.992167 0.765045 7.44056e+07 0.00350074 1.62507e+07 6.84206e+06 1.63663e+07 161 1.64192e+07 1.21453e+07 0.00324591 1.63362e+07 49.8733 0.0166963 0.994172 0 50.1772 GTEX-1A3MX-1326-SM-72D58 1 C1 2 pieces multifocal remote infarcts (rep delineated) up to ~5mm, patchy interstitial fibrosis 6 Heart Heart - Left Ventricle 0006566 1166 1390 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990879 159283 0.980302 0.992315 0.802577 21402 1 76 0.00281115 183 0 7.7499e+07 0.0195575 3.53234e+06 7.80992e+07 4.60702e+06 21420 3.85667e+07 0 0.177725 0.992315 0.796409 7.7499e+07 0.00372725 1.71577e+07 7.34621e+06 1.72817e+07 207 1.73166e+07 9.36257e+06 0.00326853 1.72314e+07 49.8767 0.0452289 0.993751 0 50.1801 GTEX-1A3MX-1926-SM-72D7F 2 C1 6 pieces, mucosa up to ~0.7mm, 30-50% thickness, moderate-markedly advanced autolysis 5.8 Stomach Stomach 0000945 1177 1383 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990395 105183 0.977066 0.991617 0.809746 22728 1 76 0.00261036 235 0 7.12566e+07 0.0227076 1.50519e+06 7.1859e+07 4.15697e+06 22752 3.54676e+07 0 0.16732 0.991617 0.802958 7.12566e+07 0.00332641 1.60323e+07 3.1986e+07 1.61499e+07 190 1.61695e+07 1.33756e+07 0.00296794 1.60988e+07 49.8905 0.0209464 0.99284 0 50.1828 GTEX-1A3MX-2326-SM-718B4 1 C1 6 pieces, confirmed target muscularis 5.8 Colon Colon - Sigmoid 0001159 1184 1379 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.962619 228162 0.972939 0.977438 0.83036 23041 1 76 0.0024051 200 0 8.87861e+07 0.026815 901754 9.08355e+07 4.39625e+06 23063 4.35434e+07 0 0.142579 0.977438 0.811626 8.87861e+07 0.0056175 1.87728e+07 9.17116e+06 1.8779e+07 210 1.93765e+07 1.63777e+07 0.00398695 1.94384e+07 50.0797 0.00992733 0.992257 0 50.0082 GTEX-1A3MX-2626-SM-7PC24 0 C1 6 pieces, no dermal fat, squamous epithelium is ~30-40 microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1189 1377 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.98626 460484 0.967632 0.988792 0.703671 25074 1 76 0.00378594 159 0 8.77159e+07 0.0321621 622999 8.87102e+07 1.44738e+07 25123 4.35358e+07 0 0.263962 0.988792 0.695784 8.77159e+07 0.00472132 1.91943e+07 1.03686e+07 1.94551e+07 174 1.96182e+07 1.20634e+07 0.00425244 1.92488e+07 49.5247 0.00702286 0.991324 0 50.3374 GTEX-1A3MX-2726-SM-718B6 1 C1 2 pieces, fibroadipose elements, minute focus of ductal elements, delineated 7 Breast Breast - Mammary Tissue 0008367 1191 1375 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.964194 415665 0.974304 0.978571 0.793599 24989 1 76 0.00253225 376 0 1.23852e+08 0.0254546 1.40231e+06 1.26564e+08 6.53327e+06 25033 6.07796e+07 0 0.180705 0.978571 0.776593 1.23852e+08 0.00566534 2.70324e+07 1.35913e+07 2.69699e+07 367 2.79164e+07 1.89119e+07 0.00407578 2.77931e+07 49.8893 0.0110798 0.992948 0 49.9421 GTEX-1A3MX-2926-SM-718B7 1 C1 4 pieces, no abnormalities 7.2 Brain Brain - Cerebellum 0002037 1198 1369 BP-53793 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.97102 762397 0.943079 0.982151 0.705757 26032 1 76 0.00281179 271 0 1.23925e+08 0.0565198 1.60451e+06 1.26177e+08 5.68789e+06 26077 6.1045e+07 0 0.237323 0.982151 0.693159 1.23925e+08 0.00534799 2.64681e+07 2.40331e+07 2.65458e+07 300 2.73057e+07 1.5763e+07 0.00406552 2.70376e+07 49.7534 0.0127163 0.993281 0 50.0733 GTEX-1A3MX-3026-SM-731BF 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1199 1369 BP-53829 RNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990451 245601 0.963031 0.9924 0.81525 23564 1 76 0.00294856 154 0 6.83583e+07 0.0365348 1.90926e+06 6.88818e+07 3.16037e+06 23584 3.40063e+07 0 0.147781 0.9924 0.809054 6.83583e+07 0.00336956 1.50291e+07 6.5694e+06 1.52119e+07 178 1.52267e+07 9.2612e+06 0.00315865 1.51329e+07 49.8455 0.027718 0.99435 0 50.3022 GTEX-1A3MX-3126-SM-731FR 1 C1 1 piece, mainly adenohpophysis, ~2x1mm nubbin of neurohypophysis, delineated 6.9 Pituitary Pituitary 0000007 1201 1368 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990413 373789 0.963312 0.992493 0.749207 24388 1 76 0.00346055 117 0 5.69793e+07 0.036464 330382 5.74103e+07 6.92523e+06 24412 2.83214e+07 0 0.214105 0.992493 0.743582 5.69793e+07 0.00416473 1.24561e+07 5.89798e+06 1.24668e+07 126 1.25551e+07 8.68548e+06 0.0038119 1.24805e+07 49.8509 0.00575475 0.994572 0 50.0215 GTEX-1A8FM-0004-SM-7J39J B1 Blood Whole Blood 0013756 1086 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6880,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A8FM-0004-SM-7MD4G B1 Blood Whole Blood 0013756 1086 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A8FM-0006-SM-7MGWI B1 7.5 Blood Whole Blood 0013756 1086 BP-53199 RNA isolation_PAXgene Blood RNA (Manual) 05/27/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.983853 233757 0.982581 0.985646 0.811556 16434 1 76 0.00284975 80 0 6.30546e+07 0.016561 110183 6.39728e+07 5.18754e+06 16437 3.14114e+07 0 0.171025 0.985646 0.799907 6.30546e+07 0.00396185 1.49988e+07 9.65523e+07 1.50108e+07 99 1.50217e+07 1.76084e+07 0.00340479 1.51111e+07 50.1484 0.00172234 0.987439 0 50.02 GTEX-1A8FM-0008-SM-EAZDD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1204 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993311 429439 0.982796 0.994256 0.871264 20892 1 76 0.00175275 291 0 1.1169e+08 0.0169142 349110 1.12335e+08 8.40275e+06 20916 5.5689e+07 0 0.111532 0.994256 0.86626 1.1169e+08 0.00257255 2.50351e+07 1.05978e+07 2.51993e+07 298 2.51727e+07 2.89987e+07 0.00216226 2.51614e+07 49.9888 0.00310775 0.995202 0 50.1635 GTEX-1A8FM-0126-SM-7SB7P 2 B1 2 pieces; large central defects 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 1201 959 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990617 215624 0.970817 0.993138 0.75918 24534 1 76 0.00265976 179 0 8.62219e+07 0.0288143 361382 8.68177e+07 9.32254e+06 24574 4.28835e+07 0 0.211637 0.993138 0.75397 8.62219e+07 0.00445058 1.88674e+07 8.45063e+06 1.90353e+07 190 1.90697e+07 1.46153e+07 0.00355289 1.9041e+07 49.9624 0.00416254 0.995659 0 50.2214 GTEX-1A8FM-0226-SM-7SB7Q 1 B1 6 pieces; well trimmed; 1% dermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1205 955 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990344 309638 0.960202 0.992643 0.690281 26669 1 76 0.00284523 252 0 1.01169e+08 0.0394739 247926 1.01919e+08 1.19932e+07 26727 5.03335e+07 0 0.269921 0.992643 0.685202 1.01169e+08 0.00404958 2.17324e+07 1.28736e+07 2.19363e+07 211 2.2017e+07 1.58284e+07 0.00344601 2.18739e+07 49.837 0.00243257 0.994942 0 50.2334 GTEX-1A8FM-0326-SM-7SB7R 1 B1 2 pieces; 30 & 40% internal & external fat; small arteries have thick sclerotic walls 5.7 Nerve Nerve - Tibial 0001323 1206 954 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98983 181113 0.96165 0.992149 0.69545 24878 1 76 0.00292585 158 0 7.27932e+07 0.0380442 186471 7.33692e+07 8.56043e+06 24921 3.61925e+07 0 0.2662 0.992149 0.68999 7.27932e+07 0.00419376 1.58641e+07 8.04198e+06 1.60304e+07 150 1.60538e+07 1.06848e+07 0.00355833 1.60058e+07 49.925 0.00254154 0.994468 0 50.2607 GTEX-1A8FM-0526-SM-7P8SF 1 B1 2 pieces; scattered atrophic fibers; 10% internal fat in 1 piece 8.3 Muscle Muscle - Skeletal 0011907 1212 948 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.939609 374526 0.97751 0.967637 0.856826 22151 1 76 0.00405245 130 0 8.06544e+07 0.0220483 383551 8.3352e+07 1.24059e+07 22163 3.90449e+07 0 0.120684 0.967637 0.829096 8.06544e+07 0.00838366 1.62995e+07 9.21424e+06 1.64205e+07 142 1.76041e+07 1.89169e+07 0.00615533 1.73358e+07 49.6161 0.00460158 0.995664 0 50.1848 GTEX-1A8FM-0626-SM-7PC25 1 B1 6 pieces; well trimmed; 1% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1214 946 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986308 380184 0.974075 0.989981 0.761943 25780 1 76 0.00363663 281 0 1.04757e+08 0.0255576 430422 1.05818e+08 1.73438e+07 25831 5.19913e+07 0 0.212132 0.989981 0.754309 1.04757e+08 0.00468901 2.29618e+07 1.27945e+07 2.32168e+07 258 2.34056e+07 1.8388e+07 0.00416087 2.31426e+07 49.7175 0.00406758 0.993653 0 50.2761 GTEX-1A8FM-0726-SM-7DUGK 1 B1 2 pieces; well dissected 7.3 Thyroid Thyroid 0002046 1239 921 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992079 276767 0.967694 0.993053 0.75017 24768 1 76 0.0029432 168 0 8.93616e+07 0.0319519 212679 8.99867e+07 7.95645e+06 24810 4.44899e+07 0 0.217524 0.993053 0.744959 8.93616e+07 0.00429794 1.96249e+07 9.15925e+06 1.96759e+07 191 1.97443e+07 1.4926e+07 0.00361991 1.96419e+07 49.87 0.00236345 0.994027 0 50.065 GTEX-1A8FM-0826-SM-793D5 1 B1 2 pieces; moderate emphysema and fibrosis with thick walled vessels & pigmented alveolar macrophages 7.8 Lung Lung 0008952 1241 919 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.990783 538768 0.970373 0.992211 0.699844 25233 1 76 0.00349377 157 0 8.83097e+07 0.0283298 283170 8.9003e+07 1.246e+07 25283 4.38868e+07 0 0.27053 0.992211 0.694393 8.83097e+07 0.00418628 1.95963e+07 1.04779e+07 1.95837e+07 174 1.96559e+07 1.31501e+07 0.00383953 1.96447e+07 49.9857 0.00318158 0.993639 0 49.9839 GTEX-1A8FM-1026-SM-7PC26 1 B1 2 pieces: 1 with 50% fibrofatty internal component 6 Heart Heart - Atrial Appendage 0006631 1244 916 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986936 299501 0.976794 0.990823 0.800872 23293 1 76 0.00372257 267 0 9.5928e+07 0.0230149 2.9414e+06 9.68165e+07 1.62448e+07 23318 4.76224e+07 0 0.175921 0.990823 0.793523 9.5928e+07 0.00526062 2.06393e+07 1.30804e+07 2.08182e+07 288 2.0905e+07 1.14478e+07 0.00448858 2.08841e+07 49.975 0.0303812 0.994711 0 50.2157 GTEX-1A8FM-1226-SM-7IGMD 1 B1 2 pieces; mild central congestion & atrophy 6 Liver Liver 0001114 1250 910 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.9934 437524 0.976239 0.994502 0.823184 21781 1 76 0.00245689 370 0 1.11728e+08 0.0236018 2.99863e+06 1.12346e+08 7.87531e+06 21806 5.56489e+07 0 0.153055 0.994502 0.818658 1.11728e+08 0.00312377 2.43716e+07 1.4692e+07 2.51433e+07 385 2.50451e+07 1.25788e+07 0.00278996 2.45687e+07 49.5198 0.0266911 0.995604 0 50.7792 GTEX-1A8FM-1426-SM-7IGPD 1 B1 6 pieces; 3 pieces have 5-10% skeletal muscle admixed (several foci labeled) 5.8 Esophagus Esophagus - Muscularis 0004648 1255 905 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993826 171341 0.969146 0.993973 0.769043 23035 1 76 0.0022169 131 0 6.0608e+07 0.0306048 774836 6.09755e+07 2.64137e+06 23059 3.01927e+07 0 0.200104 0.993973 0.764407 6.0608e+07 0.00254869 1.31803e+07 5.36158e+06 1.33406e+07 147 1.33103e+07 8.32015e+06 0.00238277 1.32227e+07 49.835 0.0127073 0.99412 0 50.3024 GTEX-1A8FM-1526-SM-7MXTA 1 B1 6 pieces; partially sloughed superficial epithelium; well dissected 6.5 Esophagus Esophagus - Mucosa 0006920 1257 903 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976356 128880 0.972054 0.98635 0.798414 23171 1 76 0.00307942 154 0 7.30197e+07 0.0277099 707513 7.40302e+07 1.18965e+07 23188 3.60651e+07 0 0.17364 0.98635 0.787516 7.30197e+07 0.00448963 1.61973e+07 8.83819e+06 1.62819e+07 177 1.65494e+07 9.9961e+06 0.00377738 1.66283e+07 50.119 0.00955709 0.996345 0 50.1302 GTEX-1A8FM-1826-SM-7MGXO 2 B1 2 pieces; moderate interstitial fibrosis; 10% external fat on 1 piece 6.3 Pancreas Pancreas 0001150 1268 892 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988422 118091 0.982647 0.990263 0.868035 20592 1 76 0.00274561 96 0 6.32538e+07 0.0171432 195913 6.38757e+07 4.93547e+06 20605 3.15212e+07 0 0.114612 0.990263 0.859583 6.32538e+07 0.00370939 1.46299e+07 2.19286e+07 1.47841e+07 102 1.47988e+07 2.02858e+07 0.0032266 1.47315e+07 49.886 0.0030671 0.992104 0 50.262 GTEX-1A8FM-1926-SM-7MXTX 2 B1 2 pieces; well dissected, no external fat 6.3 Adrenal Gland Adrenal Gland 0002369 1270 890 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976483 169919 0.973255 0.986612 0.802201 21954 1 76 0.00321209 155 0 7.11364e+07 0.026471 1.78745e+06 7.21017e+07 1.08265e+07 21975 3.51364e+07 0 0.171054 0.986612 0.791461 7.11364e+07 0.0044584 1.5222e+07 9.24998e+06 1.53392e+07 171 1.56172e+07 9.53241e+06 0.00382884 1.55955e+07 49.9652 0.0247906 0.996741 0 50.1917 GTEX-1A8FM-2026-SM-7P8RN 2 B1 6 pieces; focal intraglomerular sclerosis (diabetic type); arteriolar sclerosis 5.8 Kidney Kidney - Cortex 0001225 1273 887 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.94417 167533 0.979048 0.969965 0.837123 22741 1 76 0.00466839 119 0 6.53229e+07 0.0207636 2.85195e+06 6.73456e+07 1.01345e+07 22754 3.17098e+07 0 0.141925 0.969965 0.81198 6.53229e+07 0.00896109 1.44845e+07 1.39666e+07 1.37398e+07 161 1.4638e+07 5.80658e+06 0.00675766 1.50564e+07 50.7045 0.0423479 0.99576 0 48.6808 GTEX-1A8FM-2126-SM-7PC27 1 B1 2 pieces; portions of lymph nodes in each piece: 1 occupies 20%, other 5% of sample [labeled] 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1274 886 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988181 328932 0.975672 0.990613 0.776239 24430 1 76 0.00377067 210 0 9.39434e+07 0.024001 1.22454e+06 9.48336e+07 1.52942e+07 24464 4.66551e+07 0 0.199433 0.990613 0.768952 9.39434e+07 0.00469005 2.0702e+07 1.21731e+07 2.09519e+07 232 2.10594e+07 1.40353e+07 0.00422923 2.08161e+07 49.7095 0.0129125 0.993045 0 50.2999 GTEX-1A8FM-2226-SM-7PC1C 1 B1 2 pieces; corpora albicantia occupy 90%; a few follicles in parenchyma 7.2 Ovary Ovary 0000992 1276 884 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987924 301650 0.976358 0.990743 0.792703 23399 1 76 0.00366688 158 0 7.77141e+07 0.0231928 122759 7.84403e+07 1.31378e+07 23432 3.85709e+07 0 0.183655 0.990743 0.785365 7.77141e+07 0.00480564 1.70706e+07 9.7486e+06 1.72632e+07 161 1.73582e+07 1.56178e+07 0.00423464 1.71984e+07 49.7687 0.001565 0.993562 0 50.2805 GTEX-1A8FM-2326-SM-7MKGC 2 B1 2 pieces; atrophic endometrium occupies 20% of 1 piece, 10% of other 6.1 Uterus Uterus 0000995 1277 883 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985025 329500 0.958302 0.989639 0.740465 24772 1 76 0.00432519 138 0 7.43976e+07 0.0414484 145394 7.51765e+07 1.15619e+07 24809 3.68857e+07 0 0.217837 0.989639 0.732793 7.43976e+07 0.00488767 1.59042e+07 8.73241e+06 1.62678e+07 146 1.6427e+07 1.18649e+07 0.00460512 1.60725e+07 49.4546 0.00193403 0.994254 0 50.565 GTEX-1A8FM-2426-SM-7IGPE 1 B1 6 pieces; atrophic surface epithelium on all with almost complete sloughing on 3 5.8 Vagina Vagina 0000996 1280 880 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994182 157111 0.968935 0.994378 0.776092 23121 1 76 0.00205523 135 0 6.5378e+07 0.0308729 422200 6.57476e+07 2.74868e+06 23144 3.25801e+07 0 0.192843 0.994378 0.771729 6.5378e+07 0.00250533 1.44714e+07 6.68889e+06 1.46591e+07 161 1.46486e+07 9.20126e+06 0.00228024 1.44998e+07 49.7448 0.00642153 0.994575 0 50.3222 GTEX-1A8FM-3126-SM-7MKGF 2 B1 1 piece; well dissected neuro- and adenohypophysis [labeled] 6.1 Pituitary Pituitary 0000007 1383 777 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.987352 316511 0.960527 0.991254 0.767251 25015 1 76 0.00410529 112 0 6.89699e+07 0.0392295 279917 6.95785e+07 1.01548e+07 25055 3.4231e+07 0 0.193276 0.991254 0.76054 6.89699e+07 0.00444947 1.30496e+07 9.91951e+06 1.33155e+07 137 1.34415e+07 1.19329e+07 0.0042767 1.31605e+07 49.4717 0.00402304 0.995156 0 50.5042 GTEX-1A8G6-0004-SM-7J39W B1 Blood Whole Blood 0013756 994 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A8G6-0004-SM-7MD4S B1 Blood Whole Blood 0013756 994 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A8G6-0006-SM-7PC1X B1 8.7 Blood Whole Blood 0013756 994 BP-53199 RNA isolation_PAXgene Blood RNA (Manual) 05/27/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.974984 573234 0.977414 0.979909 0.787466 20988 1 76 0.00362051 200 0 1.14556e+08 0.021692 248420 1.16905e+08 1.92426e+07 21010 5.67747e+07 0 0.189948 0.979909 0.771645 1.14556e+08 0.00575627 2.61657e+07 1.10278e+08 2.62832e+07 208 2.65294e+07 2.71428e+07 0.00468302 2.64998e+07 49.9721 0.00212498 0.984834 0 50.112 GTEX-1A8G6-0008-SM-EWRMK B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1163 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989056 546761 0.97561 0.992498 0.847298 21900 1 76 0.00211017 291 0 1.18803e+08 0.0240713 395330 1.19701e+08 8.27643e+06 21924 5.90975e+07 0 0.128312 0.992498 0.840942 1.18803e+08 0.00262293 2.64763e+07 1.91912e+07 2.67994e+07 295 2.69459e+07 3.06742e+07 0.00235966 2.66994e+07 49.7702 0.00330264 0.995941 0 50.3032 GTEX-1A8G6-0011-R10b-SM-7P8PB B1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 998 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989671 355894 0.971198 0.992417 0.865795 22580 1 76 0.00339678 268 0 9.42179e+07 0.0285402 8.06334e+06 9.49378e+07 1.38124e+07 22591 4.68799e+07 0 0.105403 0.992417 0.85923 9.42179e+07 0.00438526 2.04137e+07 2.208e+07 2.11625e+07 289 2.11112e+07 8.20374e+06 0.00388965 2.06691e+07 49.4709 0.0849329 0.995163 0 50.9005 GTEX-1A8G6-0011-R1a-SM-7P8PC B1, A1 6.6 Brain Brain - Hippocampus 0001954 998 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989104 398683 0.968348 0.991368 0.857311 22522 1 76 0.00350906 269 0 1.00533e+08 0.0314323 9.95254e+06 1.01409e+08 1.38173e+07 22537 5.00363e+07 0 0.111037 0.991368 0.849911 1.00533e+08 0.00461595 2.18396e+07 2.88832e+07 2.25371e+07 317 2.24933e+07 6.90036e+06 0.00406124 2.20589e+07 49.5124 0.0981429 0.993632 0 50.7859 GTEX-1A8G6-0011-R5b-SM-7IGQG B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 998 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994657 337070 0.971298 0.995243 0.853347 21582 1 76 0.0022141 197 0 6.89569e+07 0.0285186 6.56941e+06 6.92865e+07 2.12966e+06 21595 3.43917e+07 0 0.117951 0.995243 0.849288 6.89569e+07 0.00263992 1.48239e+07 2.38081e+07 1.54675e+07 253 1.52198e+07 5.77674e+06 0.00242688 1.51057e+07 49.8118 0.0948151 0.995829 0 51.0625 GTEX-1A8G6-0011-R6b-SM-7P8PE B1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 998 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987593 318828 0.976662 0.989655 0.85262 21192 1 76 0.00372223 264 0 1.00905e+08 0.0232224 1.35486e+07 1.0196e+08 1.44491e+07 21205 5.02272e+07 0 0.124042 0.989655 0.8438 1.00905e+08 0.00444294 2.14344e+07 3.83443e+07 2.28839e+07 316 2.27205e+07 5.02093e+06 0.00408184 2.17395e+07 48.8967 0.132882 0.991718 0 51.6352 GTEX-1A8G6-0011-R7b-SM-7MXTV B1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 998 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.972443 297272 0.971713 0.982577 0.816674 21478 1 76 0.00332819 268 0 8.51725e+07 0.0281595 8.76142e+06 8.66828e+07 1.38269e+07 21490 4.20908e+07 0 0.155039 0.982577 0.802445 8.51725e+07 0.00451144 1.80079e+07 5.33336e+07 1.8229e+07 266 1.83319e+07 5.77821e+06 0.00391371 1.8586e+07 50.3441 0.101075 0.992712 0 50.305 GTEX-1A8G6-0011-R8a-SM-7P8PD B1, A1 6 Brain Brain - Hypothalamus 0001898 998 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990533 376320 0.970265 0.992661 0.869166 23019 1 76 0.00349924 273 0 9.99662e+07 0.0294624 7.62266e+06 1.00705e+08 1.55477e+07 23034 4.97637e+07 0 0.101099 0.992661 0.862787 9.99662e+07 0.00414902 2.16918e+07 2.09276e+07 2.27949e+07 315 2.26792e+07 9.28129e+06 0.00382344 2.19694e+07 49.2052 0.0756928 0.994789 0 51.2398 GTEX-1A8G6-0126-SM-7DUFY 0 B1 2 pieces, minimal fat 7.5 Muscle Muscle - Skeletal 0011907 1157 1081 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993772 434779 0.981059 0.99455 0.871994 21164 1 76 0.00257549 204 0 9.34604e+07 0.0186596 1.10035e+06 9.39725e+07 8.56221e+06 21177 4.65562e+07 0 0.109065 0.99455 0.867242 9.34604e+07 0.00387773 1.98681e+07 8.61951e+06 2.01191e+07 220 2.01407e+07 2.06138e+07 0.0032261 1.99115e+07 49.7139 0.0117093 0.995329 0 50.3139 GTEX-1A8G6-0226-SM-79ONQ 0 B1 2 pieces, no significant atherosis 6.7 Blood Vessel Artery - Tibial 0007610 1159 1079 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993245 148477 0.974883 0.993339 0.827672 21099 1 76 0.00305531 127 0 6.00233e+07 0.0246621 303528 6.04258e+07 3.48223e+06 21112 2.98939e+07 0 0.147211 0.993339 0.822159 6.00233e+07 0.00430233 1.28908e+07 4.61347e+06 1.29797e+07 131 1.29796e+07 1.2185e+07 0.00367876 1.28984e+07 49.8431 0.00502315 0.993433 0 50.1719 GTEX-1A8G6-0326-SM-72D6F 0 B1 2 pieces, minimal adherent fat 7.3 Nerve Nerve - Tibial 0001323 1161 1077 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.988475 100323 0.965996 0.989266 0.738827 24688 1 76 0.00280736 185 0 8.81145e+07 0.0336674 276335 8.90706e+07 5.38106e+06 24741 4.38073e+07 0 0.227169 0.989266 0.730896 8.81145e+07 0.00343102 1.94475e+07 6.90102e+06 1.94075e+07 199 1.94899e+07 1.36003e+07 0.00311894 1.94343e+07 49.9286 0.00310243 0.990058 0 49.9485 GTEX-1A8G6-0426-SM-72D6Q 0 B1 6 pieces, no adherent fat; squamous epithelium is ~30-40 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1163 1075 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.987369 86164 0.968297 0.988485 0.746581 24355 1 76 0.002869 142 0 7.06192e+07 0.0314474 324411 7.14419e+07 4.0851e+06 24397 3.51205e+07 0 0.221716 0.988485 0.737985 7.06192e+07 0.00355386 1.55891e+07 5.97939e+06 1.56158e+07 152 1.56536e+07 1.09789e+07 0.00321104 1.56279e+07 49.9589 0.00454091 0.989602 0 50.0426 GTEX-1A8G6-0526-SM-7PC1E 0 B1 2 pieces, ~5-10% fascia; rep. delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1164 1074 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.982659 350446 0.974305 0.987946 0.8076 24265 1 76 0.00423771 221 0 1.0248e+08 0.0253807 527348 1.03731e+08 1.79372e+07 24304 5.07761e+07 0 0.166705 0.987946 0.797866 1.0248e+08 0.00536641 2.2379e+07 1.08879e+07 2.27136e+07 247 2.29282e+07 1.78914e+07 0.00479904 2.26833e+07 49.7316 0.00508382 0.993233 0 50.3709 GTEX-1A8G6-0626-SM-7IGNB 1 B1 2 pieces, no abnormalities 6.1 Thyroid Thyroid 0002046 1200 1038 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993557 166499 0.966979 0.994463 0.73617 24222 1 76 0.00221049 161 0 8.05403e+07 0.0327628 762211 8.09887e+07 4.72018e+06 24269 4.01372e+07 0 0.230809 0.994463 0.732094 8.05403e+07 0.00320405 1.76874e+07 8.60029e+06 1.78086e+07 194 1.77987e+07 1.00997e+07 0.00270682 1.77677e+07 49.9564 0.00941132 0.99537 0 50.1707 GTEX-1A8G6-0726-SM-73KV5 1 B1 2 pieces, minimal congestion 7.6 Lung Lung 0008952 1201 1037 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.9904 335845 0.974797 0.991441 0.739663 24832 1 76 0.00448996 275 0 1.26549e+08 0.0246205 559519 1.27642e+08 5.55135e+06 24894 6.29381e+07 0 0.235134 0.991441 0.733333 1.26549e+08 0.00461398 2.81519e+07 1.19416e+07 2.83222e+07 323 2.83516e+07 1.95435e+07 0.00455191 2.82544e+07 49.9141 0.00438351 0.992483 0 50.1507 GTEX-1A8G6-1226-SM-73KVH 1 B1 6 pieces, confirmed target muscularis 6.4 Esophagus Esophagus - Muscularis 0004648 1213 1025 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989976 229688 0.975148 0.991267 0.759445 23279 1 76 0.00438486 211 0 9.86727e+07 0.0245779 1.82221e+06 9.9542e+07 4.60621e+06 23310 4.90733e+07 0 0.215703 0.991267 0.752813 9.86727e+07 0.00456911 2.14051e+07 8.91508e+06 2.16731e+07 224 2.16276e+07 1.41312e+07 0.00447687 2.15735e+07 49.9374 0.0183059 0.992559 0 50.311 GTEX-1A8G6-1426-SM-731EZ 2 B1 6 pieces, mucosa up to ~1mm, 40-90% thickness, moderately advanced autolysis 5.8 Stomach Stomach 0000945 1219 1019 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.985407 195549 0.979719 0.988295 0.840651 21483 1 76 0.00407613 212 0 5.88909e+07 0.0183784 2.03839e+06 5.95884e+07 6.96448e+06 21499 2.91904e+07 0 0.139068 0.988295 0.830811 5.88909e+07 0.00491666 1.32942e+07 3.34385e+07 1.37131e+07 174 1.37699e+07 8.85054e+06 0.00449517 1.33925e+07 49.3053 0.0342079 0.991184 0 50.7756 GTEX-1A8G6-1626-SM-7MGWO 1 B1 2 pieces, mild diffuse chronic ischemic changes 5.7 Heart Heart - Left Ventricle 0006566 1224 1014 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990966 97397 0.986953 0.993274 0.883396 18445 1 76 0.00328323 188 0 6.44607e+07 0.0129953 6.00687e+06 6.48972e+07 5.07914e+06 18450 3.21121e+07 0 0.103557 0.993274 0.877454 6.44607e+07 0.0042343 1.43952e+07 1.30111e+07 1.47998e+07 234 1.46116e+07 2.92236e+06 0.00375766 1.46833e+07 50.1223 0.0925598 0.995581 0 50.6929 GTEX-1A8G6-1726-SM-73KXZ 1 B1 2 pieces 20-50% occlusive atherosis (delineated), focally calicified 6.3 Blood Vessel Artery - Coronary 0001621 1230 1008 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.990765 256203 0.969381 0.991885 0.733239 23740 1 76 0.00290069 151 0 8.00803e+07 0.0302224 404735 8.07354e+07 8.43655e+06 23777 3.98298e+07 0 0.236142 0.991885 0.727289 8.00803e+07 0.00343181 1.73953e+07 6.75566e+06 1.7373e+07 168 1.7418e+07 1.28459e+07 0.00316595 1.74435e+07 50.0365 0.0050131 0.993005 0 49.968 GTEX-1A8G6-1826-SM-73KY8 1 B1 2 pieces, no abnormalities, ~30% total tssue is fat (delineated) 5.6 Heart Heart - Atrial Appendage 0006631 1232 1006 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991893 149073 0.972728 0.993125 0.820717 22035 1 76 0.00300623 259 0 8.10998e+07 0.0271152 4.85878e+06 8.16613e+07 8.15668e+06 22050 4.0417e+07 0 0.152011 0.993125 0.815075 8.10998e+07 0.00358247 1.76729e+07 1.03775e+07 1.8163e+07 258 1.80328e+07 7.53651e+06 0.003294 1.78856e+07 49.7951 0.0594992 0.994356 0 50.6839 GTEX-1A8G6-2026-SM-73KYC 1 B1 2 pieces, minimal fascia/vascular elements 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1234 1004 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99137 173969 0.97618 0.9926 0.777661 23648 1 76 0.00289468 171 0 8.11237e+07 0.0233831 1.07323e+06 8.17285e+07 8.07995e+06 23681 4.03825e+07 0 0.198518 0.9926 0.771907 8.11237e+07 0.00350969 1.80305e+07 9.31665e+06 1.81384e+07 196 1.81715e+07 1.22378e+07 0.0032018 1.80994e+07 49.9007 0.0131316 0.99383 0 50.1492 GTEX-1A8G6-2526-SM-72D59 1 B1 2 pieces, spermatogenesis appears slightly reduced 5.7 Testis Testis 0000473 1240 998 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.990235 182314 0.93835 0.991965 0.712054 29736 1 76 0.00281557 132 0 6.70452e+07 0.0614192 877000 6.75882e+07 3.50423e+06 29784 3.33596e+07 0 0.226296 0.991965 0.706333 6.70452e+07 0.00382167 1.43736e+07 7.8079e+06 1.44033e+07 140 1.44593e+07 9.73891e+06 0.00331774 1.44259e+07 49.9421 0.0129756 0.993694 0 50.0516 GTEX-1A8G6-2726-SM-731AR 0 B1 6 pieces, no significant dermal fat/ squamous epithelium is ~20-40 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1241 997 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.99023 232262 0.975693 0.992137 0.770652 22813 1 76 0.00306394 138 0 6.46161e+07 0.0240774 284759 6.51283e+07 2.76578e+06 22846 3.21424e+07 0 0.205041 0.992137 0.764592 6.46161e+07 0.00344915 1.43322e+07 6.51768e+06 1.44147e+07 140 1.44573e+07 1.11694e+07 0.00325618 1.44069e+07 49.9127 0.00437228 0.994044 0 50.1436 GTEX-1A8G6-2926-SM-731CK 1 B1 2 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 1278 960 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.992584 354711 0.963886 0.994231 0.832489 23377 1 76 0.00309149 266 0 8.1595e+07 0.0358523 5.48703e+06 8.20685e+07 3.40095e+06 23397 4.06305e+07 0 0.131398 0.994231 0.827686 8.1595e+07 0.00328435 1.78286e+07 1.89886e+07 1.82046e+07 279 1.81387e+07 7.60039e+06 0.00318776 1.80092e+07 49.8208 0.0668592 0.995878 0 50.5218 GTEX-1A8G6-3026-SM-7EWEJ 1 B1 2 pieces, no abnormalities ~50% neurohypophysis, delineated; adenohypophysis ensquared; rest is dura/connective tissue 6.3 Pituitary Pituitary 0000007 1279 959 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991126 148906 0.958655 0.992919 0.667285 25590 1 76 0.00267281 112 0 6.30028e+07 0.0410937 388510 6.34522e+07 5.28478e+06 25636 3.13487e+07 0 0.29137 0.992919 0.66256 6.30028e+07 0.00378237 1.35493e+07 6.74152e+06 1.35982e+07 127 1.36291e+07 7.80042e+06 0.00322659 1.3622e+07 49.987 0.00612288 0.994711 0 50.09 GTEX-1A8G6-3126-SM-731D8 1 B1 2 pieces, no abnormalities 6.1 Brain Brain - Cerebellum 0002037 1280 958 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.988077 489334 0.94625 0.99071 0.721245 23105 1 76 0.00344407 123 0 6.33075e+07 0.0534779 1.47235e+06 6.39011e+07 7.27531e+06 23129 3.14296e+07 0 0.225005 0.99071 0.714545 6.33075e+07 0.00432582 1.36758e+07 1.02458e+07 1.37481e+07 146 1.38797e+07 6.69716e+06 0.00388377 1.3693e+07 49.6615 0.0230411 0.993344 0 50.1318 GTEX-1A8G7-0003-SM-7J38W B1 Blood Whole Blood 0013756 544 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1A8G7-0003-SM-7MA6A B1 Blood Whole Blood 0013756 544 BP-53183 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/27/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1A8G7-0006-SM-7P8RM B1 9.3 Blood Whole Blood 0013756 544 BP-53199 RNA isolation_PAXgene Blood RNA (Manual) 05/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.93479 465838 0.974256 0.959923 0.77721 21250 1 76 0.00446781 128 0 9.65206e+07 0.0244332 247591 1.0055e+08 1.36591e+07 21266 4.68272e+07 0 0.197046 0.959923 0.746062 9.65206e+07 0.00957527 2.16766e+07 8.99777e+07 2.13999e+07 151 2.27922e+07 2.18328e+07 0.00695468 2.28237e+07 50.0344 0.00246236 0.985056 0 49.6788 GTEX-1A8G7-0008-SM-EVYAT B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 696 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994588 319489 0.978082 0.995036 0.845788 21848 1 76 0.00160497 285 0 1.08004e+08 0.0215893 516795 1.08542e+08 4.3885e+06 21874 5.38816e+07 0 0.132294 0.995036 0.841589 1.08004e+08 0.00244423 2.403e+07 1.07685e+07 2.42842e+07 287 2.42436e+07 2.75913e+07 0.00202441 2.41218e+07 49.8741 0.00476122 0.995483 0 50.2631 GTEX-1A8G7-0011-R2a-SM-7IGQI B1, A1 5.7 Brain Brain - Substantia nigra 0002038 588 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994989 183314 0.971512 0.995467 0.858738 20657 1 76 0.00158975 277 0 6.82662e+07 0.0283475 6.64621e+06 6.85771e+07 2.79903e+06 20663 3.40344e+07 0 0.112774 0.995467 0.854846 6.82662e+07 0.00210714 1.48529e+07 1.56425e+07 1.55727e+07 278 1.5235e+07 5.4485e+06 0.00184832 1.52093e+07 49.9577 0.0969159 0.995945 0 51.1829 GTEX-1A8G7-0011-R8a-SM-7P8S6 B1, A1 6.1 Brain Brain - Hypothalamus 0001898 588 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.924657 343487 0.963759 0.959507 0.855498 22452 1 76 0.00446335 148 0 6.25255e+07 0.0360196 5.14799e+06 6.51641e+07 1.11089e+07 22463 3.00248e+07 0 0.108262 0.959507 0.820856 6.25255e+07 0.00925992 1.34729e+07 1.49602e+07 1.31e+07 179 1.4089e+07 4.46468e+06 0.00677453 1.44515e+07 50.635 0.0790004 0.994357 0 49.2983 GTEX-1A8G7-0011-R9b-SM-7IGQH B1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 588 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993811 558828 0.956555 0.99404 0.850994 21804 1 76 0.00174273 224 0 7.41615e+07 0.0431092 1.94171e+06 7.46061e+07 2.71032e+06 21816 3.69776e+07 0 0.105561 0.99404 0.845923 7.41615e+07 0.00207595 1.62342e+07 1.67913e+07 1.66377e+07 217 1.64904e+07 1.24791e+07 0.0019093 1.64114e+07 49.88 0.0260261 0.994269 0 50.6136 GTEX-1A8G7-0126-SM-7DUGH 1 B1 6 pieces; well trimmed, epidermis measures 38 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 696 567 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 EXCLUDE 0.987121 183830 0.971891 0.984444 0.788777 23896 1 76 0.00300411 177 0 8.27598e+07 0.0277796 238380 8.40676e+07 1.12251e+07 23929 4.09731e+07 0 0.183114 0.984444 0.776506 8.27598e+07 0.00429684 1.83395e+07 7.29078e+06 1.80188e+07 197 1.82533e+07 1.38475e+07 0.00365223 1.79064e+07 49.5204 0.00283558 0.981766 0 49.559 GTEX-1A8G7-0226-SM-731AS 1 B1 2 pieces; some defects in section (oversized), up to 10% fibrous/vascular tissue 6 Adipose Tissue Adipose - Subcutaneous 0002190 700 563 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989049 126470 0.973994 0.990705 0.784844 22242 1 76 0.00312053 133 0 6.2538e+07 0.0256916 320992 6.31247e+07 3.271e+06 22270 3.10909e+07 0 0.18915 0.990705 0.777549 6.2538e+07 0.00351258 1.3688e+07 5.89894e+06 1.37662e+07 148 1.37866e+07 9.80116e+06 0.00331623 1.37665e+07 49.9635 0.00508505 0.992362 0 50.1425 GTEX-1A8G7-0326-SM-72D5B 1 B1 2 pieces; includes up to 20% internal fat, some atrophy 8.2 Muscle Muscle - Skeletal 0011907 701 562 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.99368 130176 0.979158 0.994879 0.857601 20682 1 76 0.0022943 156 0 7.54556e+07 0.020578 456935 7.5844e+07 4.00342e+06 20693 3.76105e+07 0 0.121557 0.994879 0.853209 7.54556e+07 0.00286951 1.61404e+07 6.43021e+06 1.62596e+07 170 1.62722e+07 1.67421e+07 0.00258156 1.62129e+07 49.9088 0.00602467 0.996078 0 50.1839 GTEX-1A8G7-0426-SM-731B5 1 B1 2 pieces; atherosclerosis, medial calcific sclerosis 7 Blood Vessel Artery - Tibial 0007610 702 561 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989238 190198 0.975369 0.99094 0.748135 22996 1 76 0.003267 123 0 6.43071e+07 0.024136 208145 6.48951e+07 3.04187e+06 23021 3.19599e+07 0 0.227233 0.99094 0.741357 6.43071e+07 0.00368527 1.4179e+07 5.45387e+06 1.42287e+07 140 1.42696e+07 1.04515e+07 0.00347577 1.42436e+07 49.9543 0.00320741 0.992641 0 50.0874 GTEX-1A8G7-0526-SM-73KYA 1 B1 2 pieces; up to 20% predominantly internal fat 7.5 Nerve Nerve - Tibial 0001323 703 560 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991375 207180 0.965068 0.992377 0.698121 23861 1 76 0.00280159 142 0 6.27252e+07 0.0346166 122164 6.3207e+07 6.46314e+06 23902 3.12124e+07 0 0.266948 0.992377 0.692799 6.27252e+07 0.00337779 1.38564e+07 5.41127e+06 1.37997e+07 134 1.38536e+07 9.01796e+06 0.0030894 1.38646e+07 50.0198 0.00193276 0.99338 0 49.8975 GTEX-1A8G7-1026-SM-73KVA 2 B1 2 pieces 6.6 Thyroid Thyroid 0002046 752 511 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989181 393700 0.962679 0.990525 0.662339 26000 1 76 0.00428573 165 0 1.0697e+08 0.0370215 381737 1.07994e+08 4.73245e+06 26073 5.31963e+07 0 0.30034 0.990525 0.656063 1.0697e+08 0.00458911 2.33971e+07 1.04585e+07 2.3411e+07 202 2.35035e+07 1.42839e+07 0.00443721 2.34427e+07 49.9353 0.00353481 0.991868 0 50.0148 GTEX-1A8G7-1126-SM-731ED 2 B1 2 pieces; congestion 6 Liver Liver 0001114 753 510 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.989218 332953 0.971747 0.991784 0.803146 21274 1 76 0.00313401 130 0 6.32588e+07 0.0276812 1.55768e+06 6.37828e+07 7.69219e+06 21292 3.14165e+07 0 0.168601 0.991784 0.796547 6.32588e+07 0.00385528 1.37936e+07 8.98153e+06 1.40937e+07 161 1.41965e+07 7.97749e+06 0.00349371 1.38384e+07 49.3613 0.0244216 0.99435 0 50.5382 GTEX-1A8G7-1226-SM-73KYP 1 B1 2 pieces; some defects in tissue (oversized) 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 754 509 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991478 145074 0.974348 0.992492 0.719832 23555 1 76 0.0028785 150 0 7.75669e+07 0.0252982 610350 7.81537e+07 8.06954e+06 23587 3.86096e+07 0 0.254516 0.992492 0.714428 7.75669e+07 0.00335238 1.72201e+07 8.99937e+06 1.71971e+07 170 1.7237e+07 1.08621e+07 0.0031152 1.72601e+07 50.0335 0.00780961 0.993507 0 49.9666 GTEX-1A8G7-1326-SM-73KVM 1 B1 6 pieces; include 5-15% attached and internal fat, small amount of carryover 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 755 508 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.987983 297641 0.973078 0.989613 0.713136 24592 1 76 0.00431139 173 0 8.91956e+07 0.0266801 408774 9.01318e+07 4.4685e+06 24646 4.43423e+07 0 0.259942 0.989613 0.705728 8.91956e+07 0.00476477 1.97489e+07 8.95439e+06 1.97907e+07 175 1.98775e+07 1.33205e+07 0.00453771 1.98084e+07 49.913 0.00453529 0.991244 0 50.0528 GTEX-1A8G7-2426-SM-731AK 1 B1 2 pieces; fat and fibrocollagenous tissue with several large vessels and nerve, no ducts seen 5.8 Breast Breast - Mammary Tissue 0008367 789 474 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.985885 137071 0.974975 0.987754 0.775404 23318 1 76 0.00304685 137 0 6.26545e+07 0.0247137 475529 6.34313e+07 3.16893e+06 23340 3.11352e+07 0 0.199571 0.987754 0.765908 6.26545e+07 0.00359481 1.3865e+07 6.04703e+06 1.39571e+07 149 1.3988e+07 1.02687e+07 0.00332031 1.39484e+07 49.9292 0.00749675 0.989622 0 50.1654 GTEX-1A8G7-2726-SM-7MGWV 1 B1 2 pieces; severe calcific atherosclerosis with narrowing of the lumen, partial rim of attached fat (15-20%) 5.6 Blood Vessel Artery - Coronary 0001621 804 459 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.980073 100745 0.97272 0.982012 0.778925 22721 1 76 0.00292054 127 0 6.02015e+07 0.0269051 1.23232e+06 6.13042e+07 5.03409e+06 22746 2.99614e+07 0 0.193794 0.982012 0.764914 6.02015e+07 0.00363283 1.32309e+07 8.35651e+06 1.33524e+07 142 1.33414e+07 9.34997e+06 0.00327598 1.33565e+07 50.0284 0.0201017 0.983951 0 50.2285 GTEX-1A8G7-2926-SM-79ONA 1 B1 1 piece; adenohypophysis and neurohypophysis (marked) with Rathke cleft remnants/cyst 6.5 Pituitary Pituitary 0000007 843 420 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992543 208376 0.95965 0.992597 0.754839 24264 1 76 0.00307835 122 0 6.04461e+07 0.0401704 848823 6.0897e+07 3.62664e+06 24289 3.00968e+07 0 0.204811 0.992597 0.749251 6.04461e+07 0.00444626 1.30964e+07 8.37218e+06 1.31926e+07 142 1.31988e+07 7.92113e+06 0.00376227 1.30976e+07 49.8075 0.0139387 0.99265 0 50.1831 GTEX-1A8G7-3026-SM-73KTT 1 B1 2 pieces 6.2 Brain Brain - Cerebellum 0002037 847 416 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989573 622074 0.939565 0.990645 0.741353 24149 1 76 0.00418808 268 0 9.40759e+07 0.0602001 2.44294e+06 9.49643e+07 4.33466e+06 24172 4.67897e+07 0 0.198211 0.990645 0.734418 9.40759e+07 0.00439291 2.00297e+07 2.81058e+07 2.03584e+07 281 2.03294e+07 8.39886e+06 0.00429039 2.01635e+07 49.7952 0.0257248 0.991717 0 50.4069 GTEX-1A8G7-3126-SM-7IGP7 1 B1 2 pieces 6 Brain Brain - Cortex 0001870 847 416 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995519 367613 0.967169 0.995932 0.842595 22801 1 76 0.00167188 368 0 8.46265e+07 0.0326166 6.32002e+06 8.49721e+07 3.12299e+06 22815 4.22043e+07 0 0.124574 0.995932 0.839167 8.46265e+07 0.00204179 1.821e+07 2.33849e+07 1.90958e+07 350 1.87501e+07 6.80467e+06 0.00185676 1.85693e+07 49.7578 0.0743776 0.996345 0 51.1872 GTEX-1AMEY-0004-SM-7J39X B1 Blood Whole Blood 0013756 -216 BP-53350 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/30/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AMEY-0004-SM-7MD4T B1 Blood Whole Blood 0013756 -216 BP-53350 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/30/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AMEY-0005-SM-7PBYK B1 6.7 Blood Whole Blood 0013756 -216 BP-53435 RNA isolation_PAXgene Blood RNA (Manual) 06/02/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98166 715526 0.942757 0.986302 0.780604 18749 1 76 0.0035885 138 0 8.46032e+07 0.0563849 541994 8.57781e+07 1.27096e+07 18757 4.19677e+07 0 0.162153 0.986302 0.769912 8.46032e+07 0.00622674 1.83625e+07 6.52699e+07 1.84623e+07 156 1.85804e+07 1.67585e+07 0.00490141 1.86268e+07 50.0624 0.00631856 0.990945 0 50.1354 GTEX-1AMEY-0008-SM-EVYAU B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 244 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994657 566218 0.979276 0.995276 0.843216 21537 1 76 0.00162322 289 0 1.04545e+08 0.0203645 496091 1.05042e+08 4.21988e+06 21558 5.21316e+07 0 0.136061 0.995276 0.839233 1.04545e+08 0.00253651 2.33155e+07 1.09568e+07 2.35638e+07 277 2.35801e+07 2.62819e+07 0.00207958 2.33654e+07 49.7714 0.00472281 0.995895 0 50.2648 GTEX-1AMEY-0126-SM-73KTX 1 B1 2 pieces; 2.6x1.4mm fibrovascular area on edge of 1 piece, otherwise well dissected 5.7 Thyroid Thyroid 0002046 133 838 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.99192 191029 0.969627 0.992953 0.773574 24804 1 76 0.00432835 207 0 9.61408e+07 0.0300684 1.09536e+06 9.68231e+07 4.52874e+06 24839 4.78771e+07 0 0.196053 0.992953 0.768122 9.61408e+07 0.0043455 2.09841e+07 1.10895e+07 2.13327e+07 244 2.12818e+07 1.34284e+07 0.00433692 2.11269e+07 49.8174 0.011313 0.993986 0 50.4119 GTEX-1AMEY-0226-SM-7189Q 1 B1 6 pieces; prominent muscularis mucosae in 5 of 6 pieces; well dissected 9.6 Esophagus Esophagus - Mucosa 0006920 148 823 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968629 325715 0.979798 0.981166 0.860252 22489 1 76 0.00262648 218 0 9.06294e+07 0.0197717 616498 9.23691e+07 3.93148e+06 22502 4.46237e+07 0 0.119546 0.981166 0.84405 9.06294e+07 0.00557342 2.03398e+07 1.36313e+07 2.03684e+07 211 2.09765e+07 1.97332e+07 0.00408112 2.08999e+07 49.9085 0.00667429 0.993703 0 50.0351 GTEX-1AMEY-0326-SM-72D5T 1 B1 6 pieces; well dissected muscle, small amount of adjacent stroma 8 Esophagus Esophagus - Muscularis 0004648 145 826 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.993925 97826 0.978522 0.995391 0.849007 20495 1 76 0.00243663 138 0 5.69314e+07 0.0211511 812528 5.7195e+07 3.88012e+06 20505 2.83784e+07 0 0.129515 0.995391 0.845094 5.69314e+07 0.00310255 1.23992e+07 4.41398e+06 1.24869e+07 140 1.24698e+07 9.85574e+06 0.0027691 1.24929e+07 50.0461 0.0142063 0.996857 0 50.1761 GTEX-1AMEY-0526-SM-72D62 1 B1 2 pieces; minimal fibrovascular component 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 164 807 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992504 135176 0.974239 0.993847 0.824645 22760 1 76 0.00279138 196 0 7.76694e+07 0.0254967 1.14675e+06 7.81503e+07 4.41539e+06 22777 3.8686e+07 0 0.149594 0.993847 0.81957 7.76694e+07 0.00355412 1.70823e+07 6.85268e+06 1.72651e+07 206 1.72182e+07 1.15358e+07 0.00317223 1.7229e+07 50.0157 0.0146736 0.995189 0 50.2662 GTEX-1AMEY-0626-SM-72D6B 1 B1 2 pieces; only myometrium in these sections, no endometrium 7.8 Uterus Uterus 0000995 168 803 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993399 186923 0.974058 0.994532 0.824882 22573 1 76 0.00265889 210 0 8.59309e+07 0.0255731 353266 8.64033e+07 4.6152e+06 22597 4.28178e+07 0 0.149177 0.994532 0.820371 8.59309e+07 0.00311228 1.86143e+07 6.23501e+06 1.87951e+07 224 1.87691e+07 1.60268e+07 0.00288533 1.87325e+07 49.9513 0.00408857 0.995665 0 50.2416 GTEX-1AMEY-0726-SM-72D5X 1 B1 6 pieces; no intimal lesions; up to 0.9mm thickfibrovascular adventitia 6.2 Blood Vessel Artery - Aorta 0001496 169 802 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.984737 91234 0.978241 0.986189 0.866976 21258 1 76 0.00267876 171 0 7.63504e+07 0.0213738 602701 7.74197e+07 4.57622e+06 21271 3.79639e+07 0 0.111265 0.986189 0.855002 7.63504e+07 0.00382219 1.66864e+07 6.01728e+06 1.67009e+07 187 1.67375e+07 1.4918e+07 0.00324963 1.67603e+07 50.0341 0.00778485 0.987641 0 50.0217 GTEX-1AMEY-0826-SM-72D65 1 B1 6 pieces; well trimmed; minimal dermal fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 172 799 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990121 102882 0.964697 0.991075 0.749716 23628 1 76 0.00275922 185 0 7.69874e+07 0.0351308 746537 7.76807e+07 4.61325e+06 23655 3.83239e+07 0 0.214981 0.991075 0.743025 7.69874e+07 0.00344815 1.68125e+07 7.42050e+06 1.68774e+07 178 1.68858e+07 1.08163e+07 0.00310335 1.68753e+07 49.9845 0.00961032 0.992029 0 50.0963 GTEX-1AMEY-0926-SM-72D6G 1 B1 2 pieces; plentiful ova in outer portion 6.8 Ovary Ovary 0000992 173 798 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990977 110159 0.967353 0.991666 0.735796 23726 1 76 0.00267724 163 0 8.00044e+07 0.0324327 457188 8.06768e+07 4.66065e+06 23768 3.98201e+07 0 0.231558 0.991666 0.729664 8.00044e+07 0.00314885 1.76372e+07 6.40178e+06 1.76287e+07 180 1.76482e+07 1.15871e+07 0.00291288 1.76736e+07 50.0359 0.00566691 0.992355 0 49.9879 GTEX-1AMEY-1026-SM-718AA 1 B1 2 pieces; fibroadipose tissue devoid of mammary parenchyma (in these cuts) 5.8 Breast Breast - Mammary Tissue 0008367 179 792 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.96251 214404 0.978415 0.973258 0.861283 24230 1 76 0.00241038 385 0 1.32575e+08 0.021181 1.53843e+06 1.36218e+08 7.20606e+06 24256 6.52854e+07 0 0.117132 0.973258 0.838251 1.32575e+08 0.00515534 2.86816e+07 1.27691e+07 2.88144e+07 375 2.94456e+07 2.73488e+07 0.0037677 2.94573e+07 50.01 0.0112939 0.984006 0 50.1155 GTEX-1AMEY-1126-SM-72D79 1 B1 2 pieces; 1 piece contains 60% salivary glands and 40% fibrous stroma and squamous epithelium; smaller piece is all fibrous stroma [images annotated] 7.6 Salivary Gland Minor Salivary Gland 0006330 175 796 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990979 117617 0.978312 0.992176 0.847875 22029 1 76 0.00288748 152 0 6.48866e+07 0.0204747 309696 6.53983e+07 3.98591e+06 22043 3.2288e+07 0 0.130437 0.992176 0.841241 6.48866e+07 0.00340004 1.48094e+07 1.55585e+07 1.49606e+07 162 1.49786e+07 1.16681e+07 0.00314345 1.48687e+07 49.8161 0.00473554 0.993373 0 50.2538 GTEX-1AMEY-1226-SM-731DU 2 B1 6 pieces; mucosa largely autolyzed; muscularis (present in 5 of 6 pieces) moderately autolyzed 5.9 Stomach Stomach 0000945 191 780 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.916558 187222 0.979245 0.918262 0.868459 21247 1 76 0.00390336 228 0 5.88101e+07 0.0201465 1.38444e+06 6.4045e+07 7.83987e+06 21255 2.92281e+07 0 0.110786 0.918262 0.797473 5.88101e+07 0.00448977 1.32295e+07 4.20372e+07 1.35865e+07 169 1.35999e+07 1.2304e+07 0.00419602 1.33183e+07 49.4769 0.0216167 0.919967 0 50.6656 GTEX-1AMEY-1326-SM-73KYK 1 B1 6 pieces; well trimmed; 5% dermal fat 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 248 723 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.9932 181852 0.969436 0.994353 0.778262 24306 1 76 0.00275768 206 0 8.33925e+07 0.0303588 1.19935e+06 8.38661e+07 8.21889e+06 24337 4.15534e+07 0 0.191174 0.994353 0.773867 8.33925e+07 0.00334918 1.83472e+07 8.24613e+06 1.84606e+07 211 1.84109e+07 1.18226e+07 0.00305308 1.84892e+07 50.1061 0.0143008 0.995505 0 50.154 GTEX-1AMEY-1426-SM-7939I 1 B1 2 pieces; <5% fibrovascular content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 261 710 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991816 206841 0.975797 0.992698 0.801521 21147 1 76 0.00248666 134 0 5.29292e+07 0.0239182 464947 5.33186e+07 5.40877e+06 21162 2.63041e+07 0 0.174276 0.992698 0.795668 5.29292e+07 0.00313421 1.17117e+07 4.74129e+06 1.17072e+07 130 1.17934e+07 8.79776e+06 0.00281015 1.16732e+07 49.744 0.00872017 0.993579 0 49.9905 GTEX-1AMEY-1526-SM-73KYW 1 B1 2 pieces; up to 10% internall fat 7.3 Muscle Muscle - Skeletal 0011907 267 704 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99544 348316 0.983949 0.996444 0.879295 20577 1 76 0.00267134 376 0 1.35072e+08 0.0158695 5.33786e+06 1.35554e+08 1.22747e+07 20591 6.73665e+07 0 0.104654 0.996444 0.876168 1.35072e+08 0.00303875 2.94468e+07 1.91175e+07 2.99966e+07 366 2.98606e+07 2.26487e+07 0.00285486 2.96958e+07 49.8616 0.0393782 0.997448 0 50.4624 GTEX-1AMEY-1626-SM-7MGW1 1 B1 2 pieces; well dissected; 10% internal fibrofatty content 7.2 Nerve Nerve - Tibial 0001323 289 682 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990525 139187 0.97342 0.992963 0.8179 23007 1 76 0.00267886 154 0 7.01891e+07 0.0262489 389629 7.06865e+07 5.04754e+06 23029 3.494e+07 0 0.15552 0.992963 0.812144 7.01891e+07 0.00344109 1.54178e+07 6.17165e+06 1.55432e+07 162 1.55589e+07 1.29211e+07 0.00305904 1.55681e+07 50.0149 0.00551207 0.995401 0 50.2026 GTEX-1AMEY-1826-SM-72D5L 2 B1 6 pieces; all contain mucosa and submucosa as well as variable amounts of muscularis; sample is of limited value; LCM 7.3 Colon Colon - Sigmoid 0001159 388 583 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.991976 114461 0.972547 0.993531 0.802927 22654 1 76 0.00310198 129 0 5.57579e+07 0.0255979 760061 5.61209e+07 3.97183e+06 22676 2.77387e+07 0 0.16962 0.993531 0.797733 5.57579e+07 0.00377546 1.23952e+07 7.42746e+06 1.25078e+07 131 1.25038e+07 8.55977e+06 0.0034382 1.24754e+07 49.943 0.0135433 0.995086 0 50.2261 GTEX-1AMEY-1926-SM-73KVT 2 B1 6 pieces; variable amounts of mucosa sampled 6.3 Colon Colon - Transverse 0001157 391 580 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991968 262330 0.977253 0.993162 0.818368 24919 1 76 0.00428855 378 0 1.22313e+08 0.0225131 3.37507e+06 1.23155e+08 5.51943e+06 24955 6.09092e+07 0 0.158885 0.993162 0.812772 1.22313e+08 0.0043896 2.67673e+07 1.76705e+07 2.72684e+07 371 2.71325e+07 1.66877e+07 0.00433901 2.70386e+07 49.9134 0.0274051 0.994356 0 50.4637 GTEX-1AMFI-0001-SM-7J39V B1 Blood Whole Blood 0013756 -123 BP-53405 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/02/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AMFI-0001-SM-7MD4R B1 Blood Whole Blood 0013756 -123 BP-53405 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/02/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AMFI-0006-SM-9KNTQ B1 8.7 Blood Whole Blood 0013756 -123 BP-53435 RNA isolation_PAXgene Blood RNA (Manual) 06/02/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991369 667959 0.954109 0.992739 0.769794 20693 1 76 0.00290345 272 0 1.09864e+08 0.0452633 237131 1.10668e+08 1.1638e+07 20717 5.4723e+07 0 0.184316 0.992739 0.764204 1.09864e+08 0.00436205 2.39609e+07 5.2573e+07 2.40843e+07 267 2.41638e+07 2.10604e+07 0.00363175 2.40309e+07 49.8621 0.00214273 0.994108 0 50.1284 GTEX-1AMFI-0008-SM-EVYAV B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 292 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994978 513713 0.982917 0.995546 0.864276 20957 1 76 0.00158482 292 0 1.22543e+08 0.0167701 216904 1.23091e+08 5.1674e+06 20982 6.11216e+07 0 0.118641 0.995546 0.860427 1.22543e+08 0.00236842 2.76185e+07 1.07681e+07 2.77556e+07 328 2.77957e+07 3.22038e+07 0.0019764 2.76471e+07 49.866 0.00176214 0.996114 0 50.1238 GTEX-1AMFI-0126-SM-73KZ2 1 B1 6 pieces, confirmed target muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 118 544 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995183 215917 0.978232 0.9961 0.852138 21833 1 76 0.00248673 221 0 8.10981e+07 0.0214176 668374 8.14156e+07 7.78203e+06 21853 4.04383e+07 0 0.126094 0.9961 0.848815 8.10981e+07 0.00280184 1.76007e+07 6.26002e+06 1.77813e+07 223 1.77633e+07 1.51668e+07 0.00264414 1.76866e+07 49.8918 0.00820941 0.997017 0 50.2553 GTEX-1AMFI-0226-SM-731D5 1 B1 6 pieces, squamous mucosa up to ~0.7mm, few submucosal mucus glands noted, rep encircled 9.3 Esophagus Esophagus - Mucosa 0006920 123 539 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990969 222452 0.975215 0.992613 0.836136 22060 1 76 0.00284732 221 0 8.66614e+07 0.0244365 532430 8.73063e+07 3.69879e+06 22078 4.31461e+07 0 0.139079 0.992613 0.82996 8.66614e+07 0.00307297 1.93118e+07 9.81711e+06 1.95314e+07 205 1.95587e+07 1.81438e+07 0.00295995 1.94147e+07 49.8153 0.00609841 0.994258 0 50.2826 GTEX-1AMFI-0326-SM-731CU 1 B1 6 pieces, confirmed target muscularis 8.3 Esophagus Esophagus - Muscularis 0004648 126 536 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991809 190160 0.978555 0.993587 0.847527 21645 1 76 0.00284959 151 0 6.92072e+07 0.0210965 545715 6.96538e+07 3.17494e+06 21663 3.44443e+07 0 0.131029 0.993587 0.842091 6.92072e+07 0.00320426 1.50073e+07 4.72457e+06 1.51503e+07 163 1.51589e+07 1.28248e+07 0.00302661 1.51105e+07 49.9201 0.00783467 0.995365 0 50.2371 GTEX-1AMFI-0426-SM-731C7 1 B1 6 pieces, trace atherosis 5.6 Blood Vessel Artery - Aorta 0001496 130 532 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988911 121027 0.97535 0.990806 0.847958 20600 1 76 0.00288313 135 0 5.94954e+07 0.0243382 394005 6.00474e+07 3.08318e+06 20611 2.95808e+07 0 0.127392 0.990806 0.840161 5.94954e+07 0.00338362 1.28051e+07 4.72377e+06 1.29242e+07 147 1.29163e+07 1.08753e+07 0.0031329 1.29179e+07 50.0031 0.00656156 0.9927 0 50.2314 GTEX-1AMFI-0526-SM-7189M 1 B1 2 pieces, no abnormalities 7.6 Thyroid Thyroid 0002046 134 528 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.963268 226295 0.966824 0.97585 0.753801 24745 1 76 0.00244965 200 0 9.88354e+07 0.0328776 365990 1.01281e+08 6.04535e+06 24783 4.84918e+07 0 0.213022 0.97585 0.735597 9.88354e+07 0.0052877 2.15191e+07 8.86482e+06 2.14154e+07 211 2.20788e+07 1.65798e+07 0.00385038 2.20727e+07 49.9931 0.0036136 0.988432 0 49.8792 GTEX-1AMFI-0626-SM-731DR 1 B1 2 pieces, well fixed cortex and central medulla (delineated) adherent nubbins of fat up to ~2mm, rep encircled 7.6 Adrenal Gland Adrenal Gland 0002369 137 525 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.992689 236512 0.978979 0.994521 0.839316 21218 1 76 0.00327866 119 0 5.78136e+07 0.0206872 1.14512e+06 5.81321e+07 6.80572e+06 21233 2.8775e+07 0 0.139663 0.994521 0.834717 5.78136e+07 0.00379135 1.27797e+07 5.12834e+06 1.2924e+07 140 1.29411e+07 9.56205e+06 0.00353453 1.2858e+07 49.839 0.0196986 0.996352 0 50.2807 GTEX-1AMFI-0726-SM-731D9 1 B1 2 pieces, focal remote pancreatitis, ensquared; Islets well preserved, rep. encirlced 6.2 Pancreas Pancreas 0001150 140 522 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990174 328551 0.978949 0.992104 0.833317 21589 1 76 0.00335337 106 0 7.79559e+07 0.0205965 203919 7.85763e+07 9.09369e+06 21609 3.87675e+07 0 0.145632 0.992104 0.826738 7.79559e+07 0.00408887 1.79367e+07 2.27605e+07 1.81165e+07 116 1.81718e+07 2.23251e+07 0.00372041 1.80304e+07 49.8048 0.00259517 0.994034 0 50.2494 GTEX-1AMFI-0826-SM-731DV 1 B1 2 pieces, diffuse moderate-severe macro and microvesicular steatosis 8.8 Liver Liver 0001114 143 519 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.992735 266699 0.983323 0.994835 0.862187 19649 1 76 0.00296493 109 0 6.49771e+07 0.016093 683261 6.53144e+07 7.18478e+06 19659 3.23351e+07 0 0.121137 0.994835 0.857733 6.49771e+07 0.00337664 1.43131e+07 8.53033e+06 1.43091e+07 137 1.43988e+07 1.48113e+07 0.00317035 1.43437e+07 49.9041 0.0104611 0.996935 0 49.993 GTEX-1AMFI-0926-SM-731E4 1 B1 2 pieces, no abnormalities 8.1 Spleen Spleen 0002106 144 518 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990454 271356 0.962997 0.992117 0.748485 23216 1 76 0.0037079 115 0 5.63982e+07 0.0362308 214239 5.68463e+07 6.77479e+06 23241 2.80279e+07 0 0.214512 0.992117 0.742585 5.63982e+07 0.0042661 1.24129e+07 6.16336e+06 1.24133e+07 121 1.24733e+07 8.99782e+06 0.00398653 1.24414e+07 49.9361 0.00376874 0.993781 0 50.0008 GTEX-1AMFI-1026-SM-73KYM 1 B1 2 pieces, ~5% vascular elements, rep encircled 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 156 506 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993496 271246 0.978284 0.994841 0.855908 21982 1 76 0.00249595 193 0 7.7728e+07 0.0214031 619041 7.8131e+07 7.69959e+06 21997 3.87259e+07 0 0.122377 0.994841 0.851492 7.7728e+07 0.00318919 1.71462e+07 6.3086e+06 1.72326e+07 206 1.72266e+07 1.37944e+07 0.0028421 1.72545e+07 50.0404 0.00792311 0.996186 0 50.1257 GTEX-1AMFI-1226-SM-731CZ 1 B1 6 pieces, well preserved mucosa up to ~'1mm, ~20-25% thickness 6.9 Stomach Stomach 0000945 118 544 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.986845 100866 0.981031 0.988905 0.842338 21499 1 76 0.00293447 265 0 6.58567e+07 0.018665 675573 6.65956e+07 3.07051e+06 21514 3.27787e+07 0 0.138693 0.988905 0.832992 6.58567e+07 0.00339127 1.50663e+07 5.42839e+07 1.53309e+07 189 1.53544e+07 1.50248e+07 0.0031624 1.51713e+07 49.7001 0.0101444 0.990966 0 50.4352 GTEX-1AMFI-1326-SM-7939R 0 B1 6 pieces, no dermal fat; squamous epithelium is ~20-50 microns 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 156 506 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.994034 98553 0.968241 0.994867 0.771536 22506 1 76 0.00224797 164 0 6.21971e+07 0.0315419 292154 6.2518e+07 5.48187e+06 22531 3.09799e+07 0 0.196705 0.994867 0.767576 6.21971e+07 0.00262461 1.36228e+07 5.69409e+06 1.35997e+07 142 1.36366e+07 1.04403e+07 0.00243613 1.36366e+07 49.9999 0.00467312 0.9957 0 49.9575 GTEX-1AMFI-1426-SM-731EL 1 B1 2 pieces, post menopausal atrophy 7.9 Ovary Ovary 0000992 162 500 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991702 341727 0.969545 0.993417 0.773612 21704 1 76 0.00321867 126 0 5.69489e+07 0.0301282 108921 5.73263e+07 6.24251e+06 21737 2.83213e+07 0 0.195933 0.993417 0.76852 5.69489e+07 0.00376176 1.25705e+07 5.11727e+06 1.25616e+07 123 1.26559e+07 1.04757e+07 0.00348974 1.25708e+07 49.8315 0.00190002 0.995132 0 49.9823 GTEX-1AMFI-1526-SM-73KVY 0 B1 6 pieces, squamous epithelium up to ~0.2mm 7.7 Vagina Vagina 0000996 164 498 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990037 166803 0.973935 0.990971 0.848734 23113 1 76 0.00411382 273 0 9.66844e+07 0.0258391 439882 9.75653e+07 4.71262e+06 23131 4.81163e+07 0 0.125201 0.990971 0.841071 9.66844e+07 0.00427777 2.13599e+07 1.22897e+07 2.16186e+07 256 2.14894e+07 1.79549e+07 0.00419572 2.15825e+07 50.108 0.00450859 0.991906 0 50.301 GTEX-1AMFI-1726-SM-7189L 1 B1 6 pieces, trace mucosa up to ~0.25mm 7.2 Colon Colon - Transverse 0001157 169 493 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.966672 409271 0.974531 0.979929 0.823741 25285 1 76 0.00274406 385 0 1.24084e+08 0.0246152 2.58297e+06 1.26625e+08 5.56784e+06 25321 6.09929e+07 0 0.15079 0.979929 0.807208 1.24084e+08 0.00555074 2.72543e+07 1.54877e+07 2.73892e+07 350 2.81668e+07 1.72947e+07 0.00412842 2.80426e+07 49.8895 0.0203985 0.993185 0 50.1234 GTEX-1AMFI-1826-SM-73KWB 1 B1 6 pieces, confirmed target muscularis 6.9 Colon Colon - Sigmoid 0001159 176 486 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992214 291639 0.975586 0.993383 0.832768 23636 1 76 0.00402283 286 0 1.04923e+08 0.0241109 606214 1.05622e+08 4.67802e+06 23665 5.22508e+07 0 0.142817 0.993383 0.827258 1.04923e+08 0.00411048 2.27704e+07 8.64905e+06 2.30994e+07 289 2.30848e+07 1.88625e+07 0.0040666 2.29077e+07 49.8074 0.00573945 0.994552 0 50.3586 GTEX-1AMFI-1926-SM-731F2 1 B1 6 pieces, well preserved mucosa, few well preserved target lymphoid aggregates encircled, ~5% total 6.5 Small Intestine Small Intestine - Terminal Ileum 0001211 183 479 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.990309 280128 0.974258 0.992822 0.812473 22617 1 76 0.00325614 137 0 6.36803e+07 0.0254332 590171 6.41407e+07 7.21146e+06 22637 3.16596e+07 0 0.161785 0.992822 0.806641 6.36803e+07 0.00393591 1.41447e+07 6.07523e+06 1.43161e+07 149 1.43328e+07 9.98846e+06 0.00359517 1.42718e+07 49.8934 0.0092012 0.995336 0 50.3011 GTEX-1AMFI-2026-SM-731BH 0 B1 6 pieces, squamous epithelium is ~40 microns; no significant dermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 292 370 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990498 136891 0.967545 0.99225 0.767452 22707 1 76 0.00301427 142 0 5.78193e+07 0.0322573 324973 5.82708e+07 2.68975e+06 22732 2.8767e+07 0 0.200093 0.99225 0.761505 5.78193e+07 0.00342618 1.26583e+07 5.16141e+06 1.27305e+07 134 1.27472e+07 9.04086e+06 0.00321986 1.27362e+07 49.9784 0.00557694 0.994003 0 50.1422 GTEX-1AMFI-2126-SM-731BT 0 B1 2 pieces, ~5-10 % fascia; rep delineated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 287 375 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.990775 173919 0.976267 0.992595 0.838131 21936 1 76 0.00293084 153 0 6.4692e+07 0.0233806 356587 6.51746e+07 3.06948e+06 21959 3.21883e+07 0 0.138136 0.992595 0.831925 6.4692e+07 0.00333906 1.41928e+07 5.10814e+06 1.43048e+07 156 1.43294e+07 1.17196e+07 0.00313458 1.42789e+07 49.9117 0.00547126 0.994415 0 50.1966 GTEX-1AMFI-2226-SM-731C6 0 B1 2 pieces, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 297 365 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.992428 272245 0.983052 0.994652 0.887967 19429 1 76 0.00168531 283 0 8.55884e+07 0.0166826 804324 8.60485e+07 3.1751e+06 19439 4.26283e+07 0 0.0950849 0.994652 0.883219 8.55884e+07 0.00210912 1.86429e+07 8.30938e+06 1.88115e+07 264 1.88676e+07 1.8117e+07 0.00189674 1.87519e+07 49.8462 0.00934733 0.996876 0 50.225 GTEX-1AMFI-2326-SM-731CI 0 B1 2 pieces trace rims of adherent fat up to ~1mm, rep delineated 6.8 Nerve Nerve - Tibial 0001323 300 362 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989612 137052 0.965595 0.991278 0.720264 23446 1 76 0.00300146 141 0 6.37891e+07 0.0341592 236938 6.43503e+07 3.13573e+06 23483 3.17179e+07 0 0.245331 0.991278 0.713983 6.37891e+07 0.00335971 1.40491e+07 4.97322e+06 1.40804e+07 141 1.41028e+07 9.07913e+06 0.00318028 1.41258e+07 50.0407 0.003682 0.992945 0 50.0556 GTEX-1AMFI-2426-SM-73KWO 0 B1 2 pieces, minimal adherent fat, subtotally occlusive atherosis, delineated, focal calcifications noted, encircled (rep) more c/w Monckeberg's 7.4 Blood Vessel Artery - Tibial 0007610 302 360 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994685 198588 0.978993 0.995664 0.849698 21103 1 76 0.00247555 170 0 7.89551e+07 0.0205754 199177 7.92989e+07 7.82062e+06 21120 3.93533e+07 0 0.129295 0.995664 0.846014 7.89551e+07 0.00293214 1.71275e+07 5.20722e+06 1.71897e+07 191 1.71937e+07 1.59871e+07 0.00270362 1.71992e+07 50.0079 0.00251172 0.996643 0 50.0905 GTEX-1AX8Y-0002-SM-7J38S B1 Blood Whole Blood 0013756 -54 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6780 02/28/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1AX8Y-0002-SM-7MA62 B1 Blood Whole Blood 0013756 -54 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AX8Y-0126-SM-731FE 0 B1 2 pieces; Hashimoto's thyroiditis in a background of multinodular goiter 7.2 Thyroid Thyroid 0002046 246 678 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 EXCLUDE 0.985291 362861 0.9649 0.987116 0.750676 24972 1 76 0.00511193 134 0 7.74673e+07 0.0299477 424775 7.84784e+07 9.66449e+06 25000 3.82877e+07 0 0.214224 0.987116 0.741004 7.74673e+07 0.00565541 1.71556e+07 1.81627e+07 1.72623e+07 152 1.74033e+07 1.15102e+07 0.00538317 1.71471e+07 49.6291 0.00541264 0.98894 0 50.1551 GTEX-1AX8Y-0226-SM-73KX1 1 B1 6 pieces; includes residual adventitia/nerve 6.7 Blood Vessel Artery - Aorta 0001496 250 674 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.992446 380198 0.979997 0.993498 0.869923 22427 1 76 0.0025504 212 0 8.89897e+07 0.0196026 361200 8.95721e+07 8.73814e+06 22435 4.4356e+07 0 0.110074 0.993498 0.864267 8.89897e+07 0.00291354 1.94937e+07 6.83109e+06 1.97056e+07 246 1.9717e+07 1.93914e+07 0.00273178 1.95706e+07 49.8136 0.0040325 0.99455 0 50.2703 GTEX-1AX8Y-0326-SM-73KYY 0 B1 2 pieces 8.1 Heart Heart - Atrial Appendage 0006631 256 668 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.995228 235371 0.979907 0.996251 0.852401 21153 1 76 0.00252334 152 0 7.25223e+07 0.0198292 1.52937e+06 7.27952e+07 7.13122e+06 21167 3.6161e+07 0 0.127506 0.996251 0.849205 7.25223e+07 0.00285761 1.56673e+07 9.02499e+06 1.59229e+07 196 1.58532e+07 1.16694e+07 0.0026903 1.57962e+07 49.91 0.0210092 0.997273 0 50.4045 GTEX-1AX8Y-0426-SM-7189O 0 B1 2 pieces; small attachment of fat 7.8 Heart Heart - Left Ventricle 0006566 260 664 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.968065 230387 0.978151 0.980848 0.841896 23049 1 76 0.00242026 371 0 1.09964e+08 0.0216208 2.29752e+06 1.12111e+08 5.45014e+06 23071 5.41101e+07 0 0.136255 0.980848 0.825772 1.09964e+08 0.00529754 2.41213e+07 1.1133e+07 2.42096e+07 334 2.48013e+07 1.74091e+07 0.00384015 2.48544e+07 50.0535 0.0204933 0.993631 0 50.0914 GTEX-1AX8Y-0526-SM-72D5K 1 B1 2 pieces; extensive bronchopneumonia 8.1 Lung Lung 0008952 268 656 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.990529 128388 0.974758 0.99206 0.789714 23736 1 76 0.0028485 142 0 7.08711e+07 0.0247549 334318 7.14383e+07 4.12039e+06 23764 3.52536e+07 0 0.185044 0.99206 0.783444 7.08711e+07 0.00375169 1.57516e+07 5.4934e+06 1.5802e+07 155 1.58282e+07 1.27731e+07 0.0032994 1.58333e+07 50.008 0.00467981 0.993592 0 50.0797 GTEX-1AX8Y-0726-SM-731CX 0 B1 3 pieces 7.9 Liver Liver 0001114 271 653 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.975784 257574 0.976751 0.977522 0.863945 19701 1 76 0.00314901 136 0 6.88294e+07 0.0227715 541490 7.04121e+07 3.04013e+06 19711 3.42146e+07 0 0.112806 0.977522 0.844525 6.88294e+07 0.00332608 1.51602e+07 1.21414e+07 1.5231e+07 154 1.52799e+07 1.50906e+07 0.00323739 1.52171e+07 49.8972 0.0076903 0.97926 0 50.1165 GTEX-1AX8Y-0826-SM-731EV 1 B1 2 pieces 7.5 Spleen Spleen 0002106 274 650 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 EXCLUDE 0.987495 492768 0.963575 0.990189 0.74744 24186 1 76 0.00383245 127 0 6.82082e+07 0.0348744 440715 6.8884e+07 8.03694e+06 24220 3.38331e+07 0 0.216136 0.990189 0.740107 6.82082e+07 0.00459593 1.50234e+07 9.46684e+06 1.50669e+07 140 1.52259e+07 1.11091e+07 0.00421315 1.50373e+07 49.6884 0.00639793 0.992883 0 50.0723 GTEX-1AX8Y-0926-SM-731EI 1 B1 2 pieces; some atrophy and chronic inflammation present with focal PanIN1 7.5 Pancreas Pancreas 0001150 275 649 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 EXCLUDE 0.990066 330913 0.971056 0.992808 0.824649 21681 1 76 0.00308244 111 0 6.14922e+07 0.0286694 200986 6.19376e+07 6.74779e+06 21699 3.0575e+07 0 0.146407 0.992808 0.818718 6.14922e+07 0.00402562 1.39671e+07 1.38642e+07 1.40441e+07 116 1.40781e+07 1.66214e+07 0.00355272 1.40971e+07 50.0337 0.00324497 0.99555 0 50.1375 GTEX-1AX8Y-1026-SM-73KWL 0 B1 2 pieces; predominantly stroma with large pacinian corpuscle, atrophy of fat 7.9 Breast Breast - Mammary Tissue 0008367 277 647 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.993548 271405 0.979334 0.994758 0.853515 21731 1 76 0.00247167 178 0 7.73131e+07 0.020423 499102 7.77206e+07 7.34456e+06 21751 3.85237e+07 0 0.125819 0.994758 0.849041 7.73131e+07 0.00305666 1.70944e+07 7.8957e+06 1.71712e+07 188 1.71683e+07 1.60655e+07 0.00276381 1.71955e+07 50.0395 0.00642175 0.995968 0 50.1121 GTEX-1AX8Y-1126-SM-731AG 0 B1 6 pieces; well trimmed 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 286 638 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.990066 197007 0.970908 0.99196 0.763218 22994 1 76 0.0030555 156 0 6.64884e+07 0.0288962 368178 6.70273e+07 3.13933e+06 23020 3.30746e+07 0 0.20769 0.99196 0.757082 6.64884e+07 0.0035511 1.47055e+07 5.8218e+06 1.47726e+07 147 1.47948e+07 1.10778e+07 0.00330283 1.48036e+07 50.015 0.00549296 0.993854 0 50.1138 GTEX-1AX8Y-1226-SM-72D6Z 0 B1 2 pieces; atrophy of fat 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 290 634 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.991967 116917 0.977325 0.993204 0.838839 22425 1 76 0.00259941 145 0 6.94243e+07 0.022419 333431 6.98994e+07 3.703e+06 22442 3.45822e+07 0 0.138485 0.993204 0.833139 6.94243e+07 0.00328992 1.53108e+07 6.45285e+06 1.54226e+07 164 1.54117e+07 1.34608e+07 0.00294423 1.54086e+07 49.995 0.00477016 0.994441 0 50.182 GTEX-1AX8Y-1326-SM-72D4Y 0 B1 6 pieces 8 Esophagus Esophagus - Mucosa 0006920 300 624 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.992345 149646 0.976537 0.993703 0.824084 22300 1 76 0.0027691 154 0 7.02007e+07 0.0230633 424269 7.06456e+07 3.61569e+06 22316 3.49721e+07 0 0.152454 0.993703 0.818894 7.02007e+07 0.00348787 1.5731e+07 7.54178e+06 1.58421e+07 156 1.58724e+07 1.38997e+07 0.00312799 1.57916e+07 49.8724 0.0060056 0.99506 0 50.176 GTEX-1AX8Y-1426-SM-73KU6 0 B1 6 pieces; target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 302 622 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.99278 266460 0.977619 0.993704 0.847755 23203 1 76 0.0039787 283 0 1.03292e+08 0.0220485 849970 1.03946e+08 4.63928e+06 23221 5.14458e+07 0 0.129864 0.993704 0.842418 1.03292e+08 0.00384308 2.23682e+07 8.73938e+06 2.26649e+07 274 2.26368e+07 1.99065e+07 0.00391095 2.24907e+07 49.8381 0.00817702 0.994629 0 50.3294 GTEX-1AX8Y-1526-SM-73KXD 0 B1 6 pieces; target muscularis with small leiomyoma 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 306 618 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.992498 375139 0.973268 0.993924 0.818296 22606 1 76 0.00260539 166 0 7.57179e+07 0.0264993 787637 7.61808e+07 7.66276e+06 22624 3.76951e+07 0 0.154972 0.993924 0.813325 7.57179e+07 0.00332889 1.65237e+07 6.45009e+06 1.66187e+07 184 1.66094e+07 1.26294e+07 0.00296662 1.66412e+07 50.0478 0.010339 0.99535 0 50.1433 GTEX-1AX8Y-1826-SM-731AU 1 B1 6 pieces; muscularis and submucosa, no mucosa (also target) 8 Colon Colon - Transverse 0001157 319 605 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.99123 212892 0.975966 0.993072 0.837148 21901 1 76 0.00286382 140 0 6.57982e+07 0.023714 491527 6.62572e+07 2.79881e+06 21919 3.27498e+07 0 0.138818 0.993072 0.831348 6.57982e+07 0.00322382 1.42831e+07 4.91322e+06 1.44108e+07 151 1.44303e+07 1.2434e+07 0.00304348 1.43735e+07 49.9015 0.00741847 0.994915 0 50.2224 GTEX-1AX8Y-1926-SM-73KWX 1 B1 6 pieces; target muscularis 8.5 Colon Colon - Sigmoid 0001159 325 599 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.993208 557354 0.976888 0.994541 0.848537 22326 1 76 0.00248399 176 0 7.84939e+07 0.0227652 510764 7.89247e+07 7.28039e+06 22342 3.9085e+07 0 0.128351 0.994541 0.843905 7.84939e+07 0.00319837 1.71616e+07 6.52877e+06 1.71163e+07 181 1.72406e+07 1.61163e+07 0.0028407 1.7139e+07 49.8522 0.00647153 0.995874 0 49.9338 GTEX-1AX8Y-2026-SM-73KUA 1 B1 6 pieces; few pieces with up to 10% internal/external fat, epidermis measures 46 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 333 591 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.990138 292198 0.970648 0.991493 0.773405 24787 1 76 0.00421398 242 0 1.00564e+08 0.0291371 784291 1.01427e+08 4.78311e+06 24827 5.00409e+07 0 0.197243 0.991493 0.766826 1.00564e+08 0.00453188 2.20283e+07 1.00625e+07 2.2148e+07 229 2.2177e+07 1.63118e+07 0.00437272 2.21303e+07 49.9473 0.0077326 0.992847 0 50.1355 GTEX-1AX8Y-2226-SM-72D51 1 B1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 339 585 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.992298 131118 0.980976 0.993635 0.858289 19980 1 76 0.00244874 179 0 7.38943e+07 0.0187743 469751 7.43677e+07 3.9488e+06 19994 3.68126e+07 0 0.122687 0.993635 0.852826 7.38943e+07 0.0032002 1.6239e+07 7.61381e+06 1.62729e+07 180 1.63004e+07 1.54409e+07 0.00282397 1.6303e+07 50.004 0.0063166 0.994973 0 50.0521 GTEX-1AX8Y-2326-SM-7189N 0 B1 2 pieces 7.2 Nerve Nerve - Tibial 0001323 345 579 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 EXCLUDE 0.96326 292921 0.969766 0.977663 0.786987 25463 1 76 0.00252767 287 0 1.05807e+08 0.029922 493387 1.08224e+08 5.58966e+06 25507 5.18653e+07 0 0.182779 0.977663 0.769408 1.05807e+08 0.00569121 2.30166e+07 9.16129e+06 2.29176e+07 263 2.36978e+07 1.82687e+07 0.00408614 2.37448e+07 50.0495 0.00455894 0.992065 0 49.8922 GTEX-1AX8Y-2426-SM-73KXP 1 B1 2 pieces; medial calcific sclerosis 7.7 Blood Vessel Artery - Tibial 0007610 346 578 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 EXCLUDE 0.99433 347429 0.975857 0.995335 0.833507 22064 1 76 0.00259292 210 0 8.57298e+07 0.0237282 236414 8.61315e+07 8.52407e+06 22082 4.2724e+07 0 0.14235 0.995335 0.829619 8.57298e+07 0.00300561 1.86757e+07 7.12177e+06 1.87457e+07 209 1.87926e+07 1.7765e+07 0.00279905 1.87133e+07 49.8943 0.0027448 0.996341 0 50.0935 GTEX-1AX8Y-5001-SM-AN45M B1 Heart Heart - Left Ventricle 0006566 263 ChIP-Seq GTEX-1AX8Y-5016-SM-AN45N B1 Muscle Muscle - Skeletal 0011907 339 ChIP-Seq GTEX-1AX8Z-0002-SM-7J39U B1 Blood Whole Blood 0013756 -14 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AX8Z-0002-SM-7MD5D B1 Blood Whole Blood 0013756 -14 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AX8Z-0006-SM-9KNVB B1 9 Blood Whole Blood 0013756 -14 BP-53659 RNA isolation_PAXgene Blood RNA (Manual) 06/09/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990923 1.01794e+06 0.943445 0.992046 0.795757 19258 1 76 0.00260917 162 0 9.00153e+07 0.0562581 604536 9.07371e+07 9.8942e+06 19274 4.48628e+07 0 0.147687 0.992046 0.789428 9.00153e+07 0.00381392 1.93314e+07 4.87596e+07 1.9492e+07 190 1.94923e+07 1.73936e+07 0.00321086 1.94561e+07 49.9535 0.0066625 0.993168 0 50.2068 GTEX-1AX8Z-0008-SM-EVYAW B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 318 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994846 592618 0.982698 0.995396 0.865035 21024 1 76 0.00154894 388 0 1.26287e+08 0.0170063 164654 1.26872e+08 4.92137e+06 21051 6.29929e+07 0 0.117664 0.995396 0.861052 1.26287e+08 0.00235857 2.84493e+07 1.14741e+07 2.86514e+07 331 2.86841e+07 3.31501e+07 0.00195353 2.84846e+07 49.8255 0.0012978 0.995946 0 50.177 GTEX-1AX8Z-0126-SM-7DHM6 1 B1 6 pieces; 20% dermal fat; well trimmed 8 Skin Skin - Sun Exposed (Lower leg) 0004264 315 560 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441,LCSET-6775 01/31/2015 TruSeq.v1 RNASEQ 0.994576 185064 0.974641 0.995451 0.82296 24653 1 76 0.00239349 286 0 9.86469e+07 0.0251245 524399 9.90978e+07 8.36285e+06 24684 4.91915e+07 0 0.151681 0.995451 0.819216 9.86469e+07 0.00336609 2.17875e+07 9.99654e+06 2.20303e+07 277 2.1973e+07 1.84323e+07 0.00287936 2.1932e+07 49.9533 0.00529173 0.996325 0 50.2771 GTEX-1AX8Z-0326-SM-731BU 1 B1 2 pieces; internal large vessels & fat comprise 15% & 5% 6.8 Muscle Muscle - Skeletal 0011907 327 548 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.992494 174058 0.978876 0.994288 0.879202 19081 1 76 0.00258491 165 0 6.45537e+07 0.020936 593864 6.49246e+07 2.58211e+06 19086 3.21549e+07 0 0.0996749 0.994288 0.87418 6.45537e+07 0.00285894 1.41025e+07 8.94358e+06 1.43968e+07 169 1.43721e+07 1.18959e+07 0.00272168 1.4225e+07 49.7428 0.00914699 0.996083 0 50.5162 GTEX-1AX8Z-0526-SM-7939M 1 B1 2 pieces; calcific foci; no plaques; well trimmed 6.3 Blood Vessel Artery - Tibial 0007610 333 542 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991779 293511 0.974955 0.99294 0.832782 20722 1 76 0.00217339 134 0 5.71095e+07 0.0246994 285059 5.75155e+07 5.19888e+06 20736 2.83851e+07 0 0.142173 0.99294 0.826903 5.71095e+07 0.00292419 1.24644e+07 4.51397e+06 1.25007e+07 141 1.2574e+07 1.103e+07 0.00254835 1.24572e+07 49.7667 0.00495621 0.994101 0 50.0727 GTEX-1AX8Z-0626-SM-731EH 1 B1 4 pieces; focal atrophy & fibrosis; 30% fibromuscular stroma 7.7 Salivary Gland Minor Salivary Gland 0006330 337 538 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6684 01/21/2015 TruSeq.v1 RNASEQ 0.991263 399813 0.966707 0.992603 0.758213 26411 1 76 0.00282674 283 0 1.14259e+08 0.0319438 417149 1.15111e+08 9.94427e+06 26458 5.68418e+07 0 0.208494 0.992603 0.752605 1.14259e+08 0.00330779 2.51312e+07 1.24046e+07 2.54272e+07 313 2.5492e+07 1.91804e+07 0.00306694 2.52117e+07 49.7236 0.00362389 0.993944 0 50.2928 GTEX-1AX8Z-0726-SM-73KTS 1 B1 6 pieces; up to 7 hair follicles per piece; well trimmed; 5% dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 338 537 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991976 256373 0.969751 0.993025 0.768521 25925 1 76 0.0039953 280 0 1.03883e+08 0.0299772 824542 1.04613e+08 4.62699e+06 25966 5.17364e+07 0 0.20123 0.993025 0.763161 1.03883e+08 0.00401883 2.28757e+07 1.26356e+07 2.31825e+07 277 2.31759e+07 1.5903e+07 0.00400705 2.29933e+07 49.8022 0.00788187 0.994074 0 50.3331 GTEX-1AX8Z-0826-SM-7DUFZ 1 B1 2 pieces; 1 piece contains 60% fibrovascular stroma 7.4 Thyroid Thyroid 0002046 344 531 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991575 404189 0.967772 0.992432 0.741678 25084 1 76 0.00282031 202 0 9.24776e+07 0.0319323 225059 9.31829e+07 8.51906e+06 25135 4.60463e+07 0 0.226094 0.992432 0.736065 9.24776e+07 0.00412238 2.02934e+07 8.85748e+06 2.03788e+07 207 2.04788e+07 1.53419e+07 0.00347078 2.02709e+07 49.7449 0.00241524 0.993289 0 50.105 GTEX-1AX8Z-0926-SM-731AW 1 B1 2 pieces; adipose tissue with 1 duct [labeled]; 5% fibrous content 8.3 Breast Breast - Mammary Tissue 0008367 351 524 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991731 204849 0.975266 0.993513 0.813117 23339 1 76 0.00273931 150 0 7.01416e+07 0.0244267 205950 7.05996e+07 2.94576e+06 23365 3.49205e+07 0 0.162149 0.993513 0.807842 7.01416e+07 0.00300443 1.55177e+07 5.83828e+06 1.56262e+07 155 1.56739e+07 1.3819e+07 0.00287163 1.55853e+07 49.8582 0.00291715 0.995295 0 50.1742 GTEX-1AX8Z-1026-SM-7189R 1 B1 2 pieces; mild microvesicular steatosis 8.4 Liver Liver 0001114 358 517 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.975301 324141 0.980882 0.985389 0.871086 21930 1 76 0.00224934 272 0 1.02482e+08 0.0188584 949184 1.04001e+08 4.34577e+06 21943 5.06036e+07 0 0.109796 0.985389 0.858358 1.02482e+08 0.00474871 2.22613e+07 1.51721e+07 2.22682e+07 311 2.27719e+07 2.20705e+07 0.00348623 2.27454e+07 49.9709 0.00912666 0.995476 0 50.0078 GTEX-1AX8Z-1126-SM-731CS 1 B1 2 pieces; 1 piece contains 90% fat, other 5% 7.5 Heart Heart - Atrial Appendage 0006631 360 515 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.991097 189707 0.972702 0.992887 0.809341 22497 1 76 0.00276073 157 0 7.8744e+07 0.0270919 1.3402e+06 7.93082e+07 3.6573e+06 22519 3.92075e+07 0 0.163361 0.992887 0.803584 7.8744e+07 0.00302985 1.67098e+07 8.81189e+06 1.69488e+07 200 1.69305e+07 1.25585e+07 0.00289505 1.68451e+07 49.8736 0.0168986 0.994676 0 50.3551 GTEX-1AX8Z-1226-SM-7DHM7 1 B1 6 pieces; no plaques; well trimmed 8 Blood Vessel Artery - Aorta 0001496 364 511 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990969 167172 0.97774 0.992074 0.843327 22534 1 76 0.0033769 146 0 7.05533e+07 0.0218672 365305 7.1117e+07 5.42987e+06 22546 3.51042e+07 0 0.134413 0.992074 0.836643 7.05533e+07 0.00518493 1.52622e+07 5.32743e+06 1.54415e+07 155 1.54511e+07 1.42878e+07 0.00427991 1.53261e+07 49.797 0.00513667 0.993179 0 50.2919 GTEX-1AX8Z-1326-SM-7DHMO 1 B1 2 pieces; no lesions; no fat 8.1 Heart Heart - Left Ventricle 0006566 368 507 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 EXCLUDE 0.992228 113088 0.981288 0.993546 0.847078 21182 1 76 0.00333065 197 0 7.68283e+07 0.018485 1.44236e+06 7.73274e+07 5.97488e+06 21196 3.82797e+07 0 0.13421 0.993546 0.841611 7.68283e+07 0.00498119 1.6909e+07 1.06215e+07 1.71611e+07 226 1.71708e+07 1.21658e+07 0.00415483 1.69777e+07 49.7173 0.0186526 0.994865 0 50.3699 GTEX-1AX8Z-1426-SM-7939T 1 B1 2 pieces; sclerotic plaques; extraneous fat and nerve comprise 40% of samples 5.8 Blood Vessel Artery - Coronary 0001621 371 504 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992329 169136 0.974344 0.992922 0.821943 21836 1 76 0.00227183 134 0 6.02898e+07 0.0252898 531873 6.07196e+07 6.17251e+06 21851 2.99631e+07 0 0.152401 0.992922 0.816125 6.02898e+07 0.00282942 1.31333e+07 4.77733e+06 1.31041e+07 146 1.31931e+07 1.11665e+07 0.00255046 1.30832e+07 49.791 0.00875949 0.993514 0 49.9443 GTEX-1AX8Z-1526-SM-73KW1 1 B1 2 pieces; focal vascular congestion & hemorrhage 8.5 Lung Lung 0008952 382 493 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.992149 322505 0.977406 0.993173 0.797103 24407 1 76 0.0041432 208 0 1.03691e+08 0.0222432 471075 1.04404e+08 4.68072e+06 24444 5.16293e+07 0 0.180302 0.993173 0.791662 1.03691e+08 0.00408662 2.30735e+07 8.80942e+06 2.3311e+07 254 2.33383e+07 1.92793e+07 0.00411494 2.31498e+07 49.7973 0.00451205 0.994198 0 50.256 GTEX-1AX8Z-1626-SM-73KWD 1 B1 2 pieces; <5% fibrovascular component 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 387 488 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991982 225354 0.980638 0.993278 0.812515 22993 1 76 0.00392275 204 0 9.28479e+07 0.0191232 797049 9.34763e+07 4.23631e+06 23013 4.62374e+07 0 0.168123 0.993278 0.807053 9.28479e+07 0.00410118 2.05584e+07 1.06032e+07 2.09052e+07 245 2.08808e+07 1.46687e+07 0.00401185 2.06986e+07 49.781 0.00852675 0.994573 0 50.4182 GTEX-1AX8Z-1726-SM-731DE 1 B1 2 pieces; 10% internal fat 7.9 Pancreas Pancreas 0001150 389 486 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991469 380764 0.976419 0.993406 0.822231 21551 1 76 0.00324328 116 0 5.60719e+07 0.023367 131368 5.64441e+07 6.47997e+06 21568 2.78806e+07 0 0.154188 0.993406 0.816809 5.60719e+07 0.00392984 1.27636e+07 8.24205e+06 1.27284e+07 116 1.28983e+07 1.46373e+07 0.00358589 1.27033e+07 49.6193 0.0023274 0.995343 0 49.9308 GTEX-1AX8Z-1826-SM-73KW6 1 B1 6 pieces; submucosal fibrous stroma comprises 10% of 3 pieces 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 396 479 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993051 624443 0.97199 0.993892 0.793114 28045 1 76 0.00387354 550 0 3.03602e+08 0.0277427 2.67372e+06 3.05467e+08 1.30313e+07 28133 1.51228e+08 0 0.178876 0.993892 0.78827 3.03602e+08 0.00371198 6.58619e+07 3.43031e+07 6.67591e+07 463 6.65089e+07 4.90734e+07 0.00379283 6.63455e+07 49.9385 0.00875286 0.994733 0 50.3383 GTEX-1AX8Z-1926-SM-72D7B 1 B1 6 pieces; well trimmed muscle 8 Esophagus Esophagus - Muscularis 0004648 411 464 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122 11/06/2014 TruSeq.v1 RNASEQ 0.995634 99370 0.975468 0.996143 0.82569 20934 1 76 0.00220013 127 0 5.59035e+07 0.0242608 295074 5.612e+07 2.71246e+06 20947 2.78858e+07 0 0.149778 0.996143 0.822505 5.59035e+07 0.00277497 1.21725e+07 4.40036e+06 1.22708e+07 133 1.22327e+07 1.02131e+07 0.0024874 1.22382e+07 50.0114 0.00525791 0.996653 0 50.201 GTEX-1AX8Z-2326-SM-731CR 1 B1 6 pieces; patchy interstitial fibrosis, but no glomerular or vascular lesions 7.9 Kidney Kidney - Cortex 0001225 427 448 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.990905 101278 0.969095 0.992615 0.775902 23667 1 76 0.00314749 115 0 5.70859e+07 0.0306418 1.07368e+06 5.75106e+07 3.04128e+06 23687 2.84067e+07 0 0.193193 0.992615 0.770172 5.70859e+07 0.00341622 1.26131e+07 4.84427e+06 1.26965e+07 127 1.27275e+07 9.19708e+06 0.00328162 1.26739e+07 49.8945 0.0186693 0.994324 0 50.1647 GTEX-1AX8Z-2426-SM-72D7D 2 B1 2 pieces; 30% external fat 8.1 Adrenal Gland Adrenal Gland 0002369 434 441 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.99324 158616 0.971494 0.994418 0.786961 23045 1 76 0.00255399 158 0 7.29087e+07 0.0282669 1.57482e+06 7.3318e+07 3.89983e+06 23072 3.63264e+07 0 0.184532 0.994418 0.782568 7.29087e+07 0.0030764 1.59666e+07 7.87246e+06 1.60762e+07 183 1.60955e+07 1.02589e+07 0.00281489 1.6025e+07 49.8902 0.0214794 0.995596 0 50.1711 GTEX-1AX8Z-2526-SM-731E3 1 B1 6 pieces; abundant lymphoid tissue, but muscularis propria present on all 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 442 433 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.988743 410456 0.963664 0.991124 0.72433 24033 1 76 0.00329777 118 0 6.22717e+07 0.0355633 144421 6.28293e+07 7.09415e+06 24063 3.09113e+07 0 0.239333 0.991124 0.717902 6.22717e+07 0.00401998 1.3732e+07 6.67582e+06 1.36986e+07 125 1.38359e+07 1.04404e+07 0.00365801 1.37364e+07 49.8196 0.00229862 0.993506 0 49.9392 GTEX-1AX8Z-2626-SM-731EP 2 B1 2 pieces; stroma well preserved 6.4 Prostate Prostate 0002367 448 427 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 EXCLUDE 0.988556 336323 0.965893 0.991095 0.739316 24532 1 76 0.00309776 127 0 6.29678e+07 0.0338489 365623 6.35335e+07 7.53418e+06 24563 3.1268e+07 0 0.226577 0.991095 0.732732 6.29678e+07 0.00392605 1.37755e+07 6.15704e+06 1.38459e+07 137 1.39378e+07 9.46271e+06 0.00351085 1.38323e+07 49.8101 0.0057548 0.993633 0 50.1275 GTEX-1AX8Z-2726-SM-73KUC 1 B1 6 pieces; submucosa & muscularis propria on all, no mucosa 7.9 Colon Colon - Transverse 0001157 458 417 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993141 255383 0.978366 0.993989 0.839227 22631 1 76 0.00388674 277 0 9.90159e+07 0.0213999 535431 9.96147e+07 4.24824e+06 22654 4.93371e+07 0 0.139139 0.993989 0.834182 9.90159e+07 0.00374613 2.17055e+07 9.06662e+06 2.2038e+07 266 2.20024e+07 1.8936e+07 0.00381649 2.18259e+07 49.7986 0.00537502 0.994837 0 50.3801 GTEX-1AX8Z-2826-SM-73KTZ 2 B1 2 pieces; greatly reduced spermatogenesis 7 Testis Testis 0000473 450 425 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991213 407634 0.955393 0.992159 0.711142 30829 1 76 0.00411558 271 0 1.0626e+08 0.0443549 2.22119e+06 1.071e+08 4.71725e+06 30893 5.28817e+07 0 0.244251 0.992159 0.705565 1.0626e+08 0.00403432 2.31266e+07 1.25287e+07 2.33238e+07 262 2.34064e+07 1.45333e+07 0.00407498 2.31425e+07 49.7165 0.0207394 0.993105 0 50.2122 GTEX-1AX8Z-5004-SM-AN45U B1 Muscle Muscle - Skeletal 0011907 328 ChIP-Seq GTEX-1AX8Z-5004-SM-ARZLD B1 7.1 Muscle Muscle - Skeletal 0011907 328 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988449 1.68837e+06 0.956966 0.991291 0.843351 19419 1 76 0.00201661 214 0 8.3248e+07 0.0428215 892548 8.39794e+07 3.07669e+06 19428 4.13259e+07 0 0.113616 0.991291 0.836006 8.3248e+07 0.00306919 1.759e+07 3.37053e+07 1.78994e+07 206 1.80738e+07 1.70329e+07 0.00254139 1.762e+07 49.3643 0.0106282 0.994133 0 50.4359 GTEX-1AX8Z-5007-SM-AHZ36 B1 8.7 Heart Heart - Left Ventricle 0006566 368 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989741 754612 0.978267 0.991112 0.847118 23457 1 76 0.00663392 274 0 1.37885e+08 0.0213939 2.42134e+06 1.39121e+08 2.62446e+07 23484 6.86419e+07 0 0.131149 0.991112 0.839588 1.37885e+08 0.00790846 3.02809e+07 2.80666e+07 3.04029e+07 322 3.0473e+07 2.47256e+07 0.00727031 3.03672e+07 49.913 0.0174045 0.992483 0 50.1006 GTEX-1AX8Z-5007-SM-AN45W B1 Heart Heart - Left Ventricle 0006566 368 ChIP-Seq GTEX-1AX8Z-5010-SM-AHZ33 B1 6.3 Lung Lung 0008952 384 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989182 548707 0.975797 0.990769 0.849725 24182 1 76 0.00678637 276 0 1.06588e+08 0.0238723 637457 1.07581e+08 1.88011e+07 24210 5.30449e+07 0 0.126073 0.990769 0.841881 1.06588e+08 0.0084988 2.35672e+07 1.37519e+07 2.38504e+07 285 2.378e+07 1.96727e+07 0.00764121 2.38029e+07 50.0241 0.00592535 0.992357 0 50.2986 GTEX-1AX8Z-5016-SM-AHZ2B B1 5.9 Esophagus Esophagus - Mucosa 0006920 413 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988731 452497 0.973857 0.990246 0.822422 24403 1 76 0.00664935 209 0 1.03181e+08 0.0259131 531811 1.04198e+08 1.78631e+07 24437 5.13693e+07 0 0.151435 0.990246 0.8144 1.03181e+08 0.00851074 2.29966e+07 1.70275e+07 2.32368e+07 252 2.32207e+07 1.85113e+07 0.00757862 2.31618e+07 49.9364 0.00510387 0.99176 0 50.2598 GTEX-1AX8Z-5019-SM-AHZ2C B1 6.5 Prostate Prostate 0002367 448 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989325 290966 0.968217 0.990739 0.809094 24497 1 76 0.00681279 127 0 6.89015e+07 0.0314857 357789 6.95456e+07 1.26058e+07 24518 3.42963e+07 0 0.159124 0.990739 0.8016 6.89015e+07 0.00807186 1.5116e+07 9.24927e+06 1.52537e+07 138 1.52416e+07 1.23477e+07 0.00744142 1.52256e+07 49.9739 0.00514467 0.992153 0 50.2267 GTEX-1AX9I-0002-SM-7J39K B1 Blood Whole Blood 0013756 518 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AX9I-0002-SM-7MD4H B1 Blood Whole Blood 0013756 518 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AX9I-0005-SM-9MQKI B1 8.7 Blood Whole Blood 0013756 518 BP-53659 RNA isolation_PAXgene Blood RNA (Manual) 06/09/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983073 671209 0.964571 0.98543 0.728081 19352 1 76 0.00634234 113 0 6.90072e+07 0.0348235 128462 7.00275e+07 8.60126e+06 19364 3.42994e+07 0 0.23649 0.98543 0.717473 6.90072e+07 0.00796761 1.51667e+07 3.61635e+07 1.53802e+07 121 1.54306e+07 1.1966e+07 0.00715303 1.52887e+07 49.769 0.00183445 0.987787 0 50.3494 GTEX-1AX9I-0008-SM-EVYAZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 616 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994187 788135 0.982015 0.994849 0.853509 21656 1 76 0.00158973 392 0 1.36706e+08 0.0176475 386845 1.37414e+08 5.5484e+06 21685 6.81638e+07 0 0.128506 0.994849 0.849112 1.36706e+08 0.00252444 3.08659e+07 1.35377e+07 3.10576e+07 341 3.11029e+07 3.64161e+07 0.00205678 3.09116e+07 49.8458 0.00281519 0.99551 0 50.1548 GTEX-1AX9I-0011-R11b-SM-7DHN4 C1, B1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 524 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.989798 235486 0.951307 0.991208 0.755654 23606 1 76 0.00377822 156 0 7.46899e+07 0.0481212 775661 7.53523e+07 5.81727e+06 23636 3.71521e+07 0 0.195653 0.991208 0.749011 7.46899e+07 0.00541565 1.61788e+07 8.59091e+06 1.62608e+07 166 1.63248e+07 1.06379e+07 0.00459577 1.62098e+07 49.8233 0.0102938 0.992618 0 50.1264 GTEX-1AX9I-0011-R1b-SM-7RHG2 C1, B1, A1 7.2 Brain Brain - Hippocampus 0001954 524 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992716 203269 0.965734 0.994439 0.85082 24185 1 76 0.00246263 272 0 8.81849e+07 0.0339841 3.30592e+06 8.86781e+07 8.0739e+06 24210 4.39312e+07 0 0.114915 0.994439 0.846088 8.81849e+07 0.00359872 1.93622e+07 9.88886e+06 1.96219e+07 291 1.95669e+07 9.80456e+06 0.0030297 1.95488e+07 49.9769 0.03728 0.996162 0 50.3331 GTEX-1AX9I-0011-R4b-SM-7EPIB C1, B1, A1 6.9 Brain Brain - Amygdala 0001876 524 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991785 455318 0.963181 0.99404 0.843881 24398 1 76 0.0030166 154 0 9.37586e+07 0.0363775 3.8422e+06 9.43207e+07 1.26798e+07 24420 4.67023e+07 0 0.1193 0.99404 0.838852 9.37586e+07 0.0113437 2.04661e+07 1.6813e+07 2.0729e+07 188 2.0736e+07 1.24958e+07 0.00717072 2.06531e+07 49.8999 0.0407354 0.996295 0 50.3192 GTEX-1AX9I-0011-R5b-SM-793DI C1, B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 524 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993553 585811 0.959557 0.994887 0.832822 23243 1 76 0.00287252 157 0 6.79751e+07 0.0399694 2.33619e+06 6.83244e+07 9.84096e+06 23260 3.38378e+07 0 0.126735 0.994887 0.828564 6.79751e+07 0.00343741 1.48058e+07 1.22345e+07 1.49178e+07 189 1.49649e+07 9.08474e+06 0.00315458 1.48452e+07 49.7993 0.0341926 0.996222 0 50.1885 GTEX-1AX9I-0011-R6a-SM-7P8PK C1, B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 524 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.98965 615922 0.95987 0.991954 0.843491 24361 1 76 0.00300553 272 0 9.95717e+07 0.0397873 5.80602e+06 1.00379e+08 1.40066e+07 24382 4.95371e+07 0 0.116379 0.991954 0.836704 9.95717e+07 0.00392562 2.15323e+07 2.10425e+07 2.19731e+07 293 2.21008e+07 1.21551e+07 0.00346451 2.16143e+07 49.4435 0.0578408 0.994257 0 50.5067 GTEX-1AX9I-0011-R7b-SM-7P8Q3 C1, B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 524 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989632 624044 0.960124 0.992194 0.839671 24321 1 76 0.00293508 272 0 1.1377e+08 0.0395943 5.54245e+06 1.14665e+08 1.48147e+07 24343 5.66139e+07 0 0.120453 0.992194 0.833116 1.1377e+08 0.00447182 2.45728e+07 2.59924e+07 2.5002e+07 307 2.49739e+07 1.17616e+07 0.00370147 2.48537e+07 49.8794 0.0483361 0.994756 0 50.4329 GTEX-1AX9I-0011-R8a-SM-7P8PJ C1, B1, A1 7.2 Brain Brain - Hypothalamus 0001898 524 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.953512 548569 0.958979 0.955382 0.836661 25846 1 76 0.00323976 274 0 1.08109e+08 0.0406772 4.2755e+06 1.13158e+08 1.65901e+07 25876 5.38073e+07 0 0.122318 0.955382 0.799331 1.08109e+08 0.00361283 2.34491e+07 1.65786e+07 2.40503e+07 306 2.40825e+07 1.31579e+07 0.00342593 2.36064e+07 49.5008 0.0377835 0.957252 0 50.6328 GTEX-1AX9I-0126-SM-7SB74 1 C1 6 pieces; well trimmed; <2% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 616 455 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991604 272450 0.962379 0.993252 0.67772 25586 1 76 0.00280289 164 0 8.29133e+07 0.0373803 454206 8.34766e+07 8.13578e+06 25644 4.12769e+07 0 0.284659 0.993252 0.673147 8.29133e+07 0.00382538 1.80139e+07 1.1296e+07 1.82201e+07 164 1.82425e+07 1.16035e+07 0.00331328 1.8123e+07 49.8358 0.00544112 0.994901 0 50.2845 GTEX-1AX9I-0226-SM-7SB75 1 C1 2 pieces: 1 is 98% fat, other contains 15% fibrovascular & neural tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 618 454 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98952 190476 0.964793 0.991982 0.649314 26222 1 76 0.00296171 212 0 1.03643e+08 0.0348989 416101 1.04481e+08 1.17499e+07 26291 5.155e+07 0 0.315479 0.991982 0.644107 1.03643e+08 0.00417458 2.26304e+07 1.12503e+07 2.28664e+07 228 2.29303e+07 1.35336e+07 0.00356664 2.28084e+07 49.8667 0.00398255 0.994444 0 50.2594 GTEX-1AX9I-0326-SM-73KXQ 1 C1 2 pieces; 5% internal fat 8.2 Muscle Muscle - Skeletal 0011907 619 453 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995421 278825 0.985995 0.996412 0.885808 19794 1 76 0.00227152 200 0 8.09323e+07 0.0137459 725447 8.12237e+07 7.92746e+06 19803 4.03619e+07 0 0.100187 0.996412 0.88263 8.09323e+07 0.0026652 1.75782e+07 7.34131e+06 1.77696e+07 209 1.78023e+07 1.73075e+07 0.00246817 1.76182e+07 49.7402 0.00893147 0.997404 0 50.2708 GTEX-1AX9I-0426-SM-73KY3 1 C1 2 pieces; 30% internal fibrous stroma; 10% internal fat on 1, 10% external fat on other 7.2 Nerve Nerve - Tibial 0001323 621 452 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993232 304768 0.968016 0.994271 0.765629 24306 1 76 0.0026428 184 0 8.02779e+07 0.0316442 249750 8.07405e+07 7.97153e+06 24348 3.99863e+07 0 0.202386 0.994271 0.761243 8.02779e+07 0.00311076 1.76900e+07 7.11608e+06 1.76631e+07 182 1.77113e+07 1.35441e+07 0.00287653 1.77223e+07 50.0155 0.00309324 0.995309 0 49.9618 GTEX-1AX9I-0626-SM-72D54 1 C1 2 pieces; no llesions 7.4 Thyroid Thyroid 0002046 645 429 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.991995 173751 0.968252 0.993134 0.763153 24406 1 76 0.00271004 170 0 8.83295e+07 0.0314171 244467 8.89402e+07 4.36654e+06 24446 4.39807e+07 0 0.2051 0.993134 0.757913 8.83295e+07 0.00336673 1.94162e+07 7.84242e+06 1.94195e+07 191 1.94754e+07 1.56603e+07 0.00303801 1.94584e+07 49.9782 0.00274867 0.994273 0 50.0042 GTEX-1AX9I-0726-SM-73KWV 1 C1 2 pieces; fibrofatty tissue without ducts 6.9 Breast Breast - Mammary Tissue 0008367 647 427 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991147 213430 0.977146 0.992288 0.799173 22868 1 76 0.00263546 158 0 7.32938e+07 0.0225635 319299 7.38635e+07 7.76169e+06 22883 3.64905e+07 0 0.177973 0.992288 0.793009 7.32938e+07 0.00326547 1.61864e+07 7.18519e+06 1.6194e+07 174 1.62343e+07 1.23834e+07 0.0029501 1.62315e+07 49.9956 0.00432283 0.993429 0 50.0116 GTEX-1AX9I-0826-SM-73KUT 2 C1 2 pieces; moderate vascular congestion and alveolar exudates with patchy emphysema 6.8 Lung Lung 0008952 652 423 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990348 277331 0.970739 0.991324 0.711103 25846 1 76 0.00453524 168 0 9.79303e+07 0.0286164 233094 9.87874e+07 4.38657e+06 25900 4.87062e+07 0 0.259635 0.991324 0.704933 9.79303e+07 0.00446709 2.16383e+07 9.58939e+06 2.17525e+07 191 2.18074e+07 1.52688e+07 0.0045012 2.16791e+07 49.8525 0.00235955 0.992299 0 50.1317 GTEX-1AX9I-0926-SM-73KX8 1 C1 2 pieces; severe calcific atherosclerosis 5.6 Blood Vessel Artery - Coronary 0001621 655 421 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991136 173134 0.973479 0.992253 0.751906 23114 1 76 0.00283096 152 0 7.46614e+07 0.0261797 452788 7.52443e+07 7.43955e+06 23150 3.71595e+07 0 0.221574 0.992253 0.74608 7.46614e+07 0.00339185 1.63889e+07 7.38046e+06 1.64089e+07 167 1.64441e+07 1.17758e+07 0.00311109 1.64359e+07 49.9876 0.00601757 0.99337 0 50.0305 GTEX-1AX9I-1026-SM-73KYF 1 C1 2 pieces; 60% & 40% internal fat 6.6 Heart Heart - Atrial Appendage 0006631 660 416 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993495 166164 0.97646 0.99461 0.814942 22633 1 76 0.0025166 190 0 7.37955e+07 0.0231814 2.17134e+06 7.41954e+07 7.14769e+06 22659 3.67696e+07 0 0.161518 0.99461 0.81055 7.37955e+07 0.00296856 1.61867e+07 7.8936e+06 1.63278e+07 210 1.63308e+07 9.2393e+06 0.00274233 1.62593e+07 49.8902 0.0292652 0.995725 0 50.2171 GTEX-1AX9I-1126-SM-7EPHH 1 C1 2 pieces; patchy scars up to 0.8mm (labeled) 6.8 Heart Heart - Left Ventricle 0006566 661 416 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.992226 122420 0.984979 0.994382 0.845829 20261 1 76 0.00278035 186 0 8.76883e+07 0.0149293 3.88762e+06 8.81837e+07 1.11968e+07 20276 4.37174e+07 0 0.139149 0.994382 0.841078 8.76883e+07 0.0109177 1.88338e+07 3.13687e+07 1.97079e+07 204 1.95215e+07 7.47308e+06 0.00684018 1.91446e+07 49.5126 0.0440855 0.996539 0 51.134 GTEX-1AX9I-1226-SM-731CJ 1 C1 6 pieces; aortic dissection in 3 of 6 pieces [labeled] 6.1 Blood Vessel Artery - Aorta 0001496 663 414 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.986675 1.47201e+06 0.898578 0.988489 0.685828 22011 1 76 0.00324925 126 0 6.63596e+07 0.10105 241272 6.71323e+07 3.29464e+06 22032 3.29709e+07 0 0.212749 0.988489 0.677934 6.63596e+07 0.00368833 1.31719e+07 5.58476e+07 1.34083e+07 135 1.3438e+07 9.47318e+06 0.00346839 1.32929e+07 49.7286 0.00359398 0.990303 0 50.4448 GTEX-1AX9I-1426-SM-7DHM8 1 C1 6 pieces; well preserved epithelium; submucosal glands in 2 pieces up to 10% area [labeled] 7.9 Esophagus Esophagus - Mucosa 0006920 665 413 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991223 135128 0.972181 0.992435 0.794715 22156 1 76 0.00360429 136 0 6.81988e+07 0.0275709 419178 6.87187e+07 5.33893e+06 22180 3.39463e+07 0 0.177466 0.992435 0.788703 6.81988e+07 0.00541819 1.52511e+07 7.833e+06 1.53575e+07 153 1.53835e+07 1.10779e+07 0.00451013 1.53065e+07 49.8745 0.00609991 0.993646 0 50.1738 GTEX-1AX9I-1526-SM-72D53 1 C1 6 pieces; well dissected muscle 7.2 Esophagus Esophagus - Muscularis 0004648 666 413 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.990761 176602 0.97287 0.991992 0.775099 23188 1 76 0.00275473 152 0 7.58765e+07 0.0268697 582879 7.6489e+07 4.29007e+06 23213 3.77608e+07 0 0.197771 0.991992 0.768892 7.58765e+07 0.00345531 1.6399e+07 6.23842e+06 1.64874e+07 173 1.64875e+07 1.17264e+07 0.00310458 1.64879e+07 50.0007 0.00762043 0.993221 0 50.1343 GTEX-1AX9I-1626-SM-72D5D 1 C1 2 pieces; moderate macrovesicular steatosis 6.1 Liver Liver 0001114 667 412 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.992254 135240 0.968489 0.993352 0.786026 21310 1 76 0.00261061 264 0 8.08533e+07 0.0314132 1.7088e+06 8.13944e+07 4.45673e+06 21331 4.02642e+07 0 0.182463 0.993352 0.780801 8.08533e+07 0.0032357 1.7834e+07 1.02395e+07 1.80061e+07 276 1.79315e+07 6.72029e+06 0.00292281 1.79847e+07 50.074 0.020994 0.994451 0 50.2401 GTEX-1AX9I-1726-SM-731BX 1 C1 2 pieces; 2% fibrous content 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 669 411 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988424 156694 0.976267 0.990274 0.759833 22982 1 76 0.00300737 145 0 7.12054e+07 0.0233982 156811 7.19048e+07 3.47683e+06 23010 3.53843e+07 0 0.216435 0.990274 0.752442 7.12054e+07 0.00345798 1.56455e+07 6.03285e+06 1.5637e+07 156 1.5695e+07 1.17967e+07 0.00323225 1.57104e+07 50.0244 0.00218081 0.992123 0 49.9864 GTEX-1AX9I-1826-SM-72D5I 1 C1 2 pieces; active spermatogenesis; rare sclerotic tubules 6.6 Testis Testis 0000473 675 406 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.991191 240530 0.916216 0.992276 0.680911 33840 1 76 0.00279558 156 0 8.59887e+07 0.0834992 633607 8.6658e+07 4.01148e+06 33919 4.28356e+07 0 0.235305 0.992276 0.675652 8.59887e+07 0.00334401 1.77366e+07 1.10937e+07 1.77987e+07 164 1.78509e+07 1.29835e+07 0.0030695 1.77657e+07 49.8804 0.00731158 0.993362 0 50.0873 GTEX-1AX9I-2226-SM-73KUO 1 C1 6 pieces; well trimmed; up to 10% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 688 397 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991325 387182 0.972939 0.99246 0.782639 25058 1 76 0.00412122 235 0 9.88063e+07 0.0267715 550705 9.95569e+07 4.29869e+06 25092 4.91756e+07 0 0.190299 0.99246 0.776738 9.88063e+07 0.00434442 2.17557e+07 1.24398e+07 2.18579e+07 222 2.19097e+07 1.70212e+07 0.0042327 2.18191e+07 49.8964 0.00553156 0.993596 0 50.1171 GTEX-1AX9I-2326-SM-7PBXV 2 C1 2 pieces: 1 is all stroma; other contains glands which are largely autolyzed; stroma preserved 6.6 Prostate Prostate 0002367 690 396 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98738 106889 0.967617 0.991307 0.770272 24412 1 76 0.00307194 135 0 6.73018e+07 0.0320749 386109 6.7892e+07 8.98614e+06 24435 3.34231e+07 0 0.197345 0.991307 0.763576 6.73018e+07 0.00530622 1.45307e+07 6.53141e+06 1.4664e+07 148 1.472e+07 1.04692e+07 0.00418466 1.47254e+07 50.0093 0.0056871 0.995234 0 50.2283 GTEX-1AX9I-2626-SM-73KU5 2 C1 6 pieces; mucosa largely autolyzed; muscularis intact 5.8 Colon Colon - Transverse 0001157 700 387 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.987473 198602 0.969383 0.988527 0.802181 25362 1 76 0.00463547 204 0 9.14295e+07 0.0285794 781487 9.24906e+07 4.61547e+06 25396 4.53762e+07 0 0.167201 0.988527 0.792978 9.14295e+07 0.00491445 1.9994e+07 1.04004e+07 2.01204e+07 216 2.01594e+07 1.43032e+07 0.00477481 2.00503e+07 49.8643 0.00844937 0.989581 0 50.1575 GTEX-1AX9I-3026-SM-73KUH 1 C1 4 pieces; 1 piece is poorly preserved & contains meninges 6.9 Brain Brain - Cortex 0001870 710 379 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.99289 352241 0.968638 0.993799 0.833476 24282 1 76 0.00395557 269 0 1.05225e+08 0.0309782 3.93129e+06 1.05882e+08 4.71667e+06 24299 5.24134e+07 0 0.135162 0.993799 0.828307 1.05225e+08 0.00384624 2.28615e+07 2.28222e+07 2.34053e+07 329 2.33076e+07 1.23697e+07 0.00390095 2.30553e+07 49.7279 0.0371291 0.994708 0 50.5877 GTEX-1AX9I-3126-SM-7RHG9 2 C1 1 piece; adenohypophysis makes up 2/3 and is moderately autolyzed; neurohypophysis [circled] is better preserved 7.5 Pituitary Pituitary 0000007 711 379 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990043 237051 0.964795 0.992548 0.744514 26089 1 76 0.00253318 273 0 1.05814e+08 0.0348863 1.27606e+06 1.06608e+08 1.012e+07 26144 5.26632e+07 0 0.220281 0.992548 0.738966 1.05814e+08 0.00372312 2.31057e+07 1.07887e+07 2.32568e+07 268 2.33372e+07 1.58366e+07 0.00312665 2.32758e+07 49.9342 0.0119696 0.995052 0 50.163 GTEX-1AX9J-0004-SM-7J38U B1 Blood Whole Blood 0013756 -110 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AX9J-0004-SM-7MA68 B1 Blood Whole Blood 0013756 -110 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AX9J-0005-SM-9MQKU B1 9.1 Blood Whole Blood 0013756 -110 BP-53659 RNA isolation_PAXgene Blood RNA (Manual) 06/09/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.977088 788308 0.957372 0.979635 0.790298 17471 1 76 0.00587531 106 0 6.46919e+07 0.0418813 136007 6.60367e+07 8.11759e+06 17477 3.21381e+07 0 0.167073 0.979635 0.774204 6.46919e+07 0.00801695 1.43155e+07 5.7923e+07 1.44269e+07 120 1.44738e+07 1.35952e+07 0.00694335 1.4449e+07 49.9572 0.00205957 0.982183 0 50.1938 GTEX-1AX9J-0008-SM-EVYB2 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 487 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.995032 709382 0.983001 0.995575 0.871309 21222 1 76 0.00156925 392 0 1.46777e+08 0.0166619 228680 1.47429e+08 5.28417e+06 21240 7.3209e+07 0 0.111692 0.995575 0.867453 1.46777e+08 0.00232863 3.31286e+07 1.37474e+07 3.33829e+07 346 3.34239e+07 3.97802e+07 0.00194873 3.31696e+07 49.809 0.00155112 0.996119 0 50.1911 GTEX-1AX9J-0126-SM-73KY2 0 B1 2 pieces, only trace interstitial fat 8 Muscle Muscle - Skeletal 0011907 483 547 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995303 376699 0.986031 0.99632 0.893383 18647 1 76 0.00237871 272 0 9.26373e+07 0.0137416 721997 9.29794e+07 8.6496e+06 18650 4.61957e+07 0 0.0926476 0.99632 0.890096 9.26373e+07 0.00283239 1.99979e+07 9.47676e+06 2.01969e+07 260 2.02194e+07 2.01438e+07 0.00260532 2.00575e+07 49.799 0.00776512 0.997336 0 50.2475 GTEX-1AX9J-0226-SM-73KXM 0 B1 6 pieces, no significant dermal fat, squamous epithelium is ~30-40 microns 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 488 542 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993709 336567 0.972129 0.994869 0.785786 23775 1 76 0.00269219 236 0 8.36927e+07 0.0275847 296849 8.41244e+07 7.97396e+06 23804 4.17065e+07 0 0.186343 0.994869 0.781754 8.36927e+07 0.00323284 1.82793e+07 9.1262e+06 1.82911e+07 193 1.83404e+07 1.51436e+07 0.0029622 1.83243e+07 49.978 0.00352869 0.996028 0 50.016 GTEX-1AX9J-0326-SM-73KXY 0 B1 2 pieces, ~15-20% fascia/vascular elements, rep. delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 489 541 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994014 248432 0.975851 0.995069 0.797369 22801 1 76 0.00262169 173 0 7.89519e+07 0.0238187 259694 7.93431e+07 7.67987e+06 22825 3.93468e+07 0 0.178482 0.995069 0.793437 7.89519e+07 0.00309563 1.74081e+07 7.11142e+06 1.7412e+07 183 1.74306e+07 1.41632e+07 0.00285841 1.74714e+07 50.0585 0.00327305 0.996124 0 50.0057 GTEX-1AX9J-0426-SM-7MGVQ 0 B1 2 pieces, rims of fat/fibrous tissue up to ~1mm 6.1 Blood Vessel Artery - Tibial 0007610 492 538 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989416 68654 0.976629 0.991249 0.885998 19243 1 76 0.00232341 156 0 6.55103e+07 0.0230255 365168 6.60886e+07 5.1586e+06 19250 3.26353e+07 0 0.0906302 0.991249 0.878245 6.55103e+07 0.00331048 1.36304e+07 6.40348e+06 1.37989e+07 157 1.36892e+07 1.54868e+07 0.00281603 1.38532e+07 50.2978 0.00552543 0.993081 0 50.3071 GTEX-1AX9J-0526-SM-72D5O 0 B1 2 pieces, rims of fat up to ~0.5mm; ~40-50% interstital fat 7.6 Nerve Nerve - Tibial 0001323 495 535 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.988556 84946 0.967969 0.989078 0.758188 22993 1 76 0.0027484 164 0 6.93798e+07 0.0317206 169320 7.0146e+07 4.05531e+06 23025 3.44979e+07 0 0.209781 0.989078 0.749906 6.93798e+07 0.00345314 1.53343e+07 5.54729e+06 1.52632e+07 160 1.53182e+07 1.0654e+07 0.00310058 1.53182e+07 50 0.00241382 0.989599 0 49.8838 GTEX-1AX9J-0626-SM-72D7L 2 B1 2 pieces, ~50% target, all cortex, moderately autolyzed; rest is adherent fat 8.6 Adrenal Gland Adrenal Gland 0002369 496 534 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.993835 139073 0.978918 0.994891 0.836299 20898 1 76 0.00270116 127 0 6.25944e+07 0.0207897 898797 6.29159e+07 3.13291e+06 20912 3.1191e+07 0 0.142619 0.994891 0.832026 6.25944e+07 0.0031787 1.38491e+07 5.57176e+06 1.39716e+07 149 1.39822e+07 1.03398e+07 0.00293968 1.38966e+07 49.8464 0.0142857 0.995947 0 50.2202 GTEX-1AX9J-0726-SM-7PC2E 1 B1 6 pieces, minimal atherosis 6.6 Blood Vessel Artery - Aorta 0001496 525 505 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986385 401544 0.973357 0.990347 0.802466 22452 1 76 0.00350809 203 0 9.03083e+07 0.0262772 264135 9.11885e+07 1.45977e+07 22480 4.48008e+07 0 0.170891 0.990347 0.79472 9.03083e+07 0.00497706 1.94604e+07 8.43535e+06 1.97003e+07 208 1.98336e+07 1.53189e+07 0.00423964 1.9664e+07 49.7854 0.00289658 0.994309 0 50.3064 GTEX-1AX9J-0926-SM-73KXA 1 B1 2 pieces, no abnormalities 7.5 Heart Heart - Atrial Appendage 0006631 537 493 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991317 457637 0.977897 0.992572 0.8458 21618 1 76 0.00275505 266 0 9.40929e+07 0.0218777 1.8829e+06 9.47971e+07 1.03686e+07 21637 4.68039e+07 0 0.132097 0.992572 0.839517 9.40929e+07 0.00338429 2.04175e+07 1.04866e+07 2.06456e+07 316 2.06574e+07 1.30846e+07 0.00306927 2.05062e+07 49.8164 0.0198624 0.993827 0 50.2778 GTEX-1AX9J-1026-SM-72D6E 1 B1 2 pieces, mild interstitial fibrosis 7.6 Heart Heart - Left Ventricle 0006566 538 492 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.994504 113869 0.982469 0.995955 0.863406 19552 1 76 0.00243868 150 0 6.75776e+07 0.0172992 785281 6.7852e+07 5.03562e+06 19562 3.36923e+07 0 0.119063 0.995955 0.859913 6.75776e+07 0.00297671 1.49968e+07 6.83911e+06 1.50804e+07 169 1.50785e+07 1.20398e+07 0.0027073 1.50853e+07 50.0112 0.0115734 0.997406 0 50.1391 GTEX-1AX9J-1126-SM-731B7 1 B1 2 pieces, all fibroadipose elements, no ductal structures noted 6.1 Breast Breast - Mammary Tissue 0008367 556 474 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.988633 131949 0.975516 0.990098 0.80501 21517 1 76 0.00291202 130 0 5.79852e+07 0.0241722 259204 5.85651e+07 2.96119e+06 21538 2.8831e+07 0 0.170506 0.990098 0.797039 5.79852e+07 0.00331001 1.2786e+07 4.90652e+06 1.28454e+07 142 1.28635e+07 9.78788e+06 0.00311072 1.28486e+07 49.9712 0.00442591 0.991562 0 50.1159 GTEX-1AX9J-1226-SM-72D6P 2 B1 2 pieces, spermatogenesis appears reduced 6.8 Testis Testis 0000473 557 473 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 RNASEQ 0.991447 265416 0.925877 0.992703 0.711841 32166 1 76 0.00273511 143 0 7.16952e+07 0.0738464 465007 7.22222e+07 3.86664e+06 32223 3.5713e+07 0 0.214036 0.992703 0.706647 7.16952e+07 0.00333761 1.49638e+07 1.021e+07 1.50381e+07 141 1.50787e+07 1.13059e+07 0.00303598 1.50036e+07 49.8752 0.00643856 0.99396 0 50.1238 GTEX-1AX9J-1326-SM-731BJ 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~30-60 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 560 470 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123 11/07/2014 TruSeq.v1 RNASEQ 0.990378 536936 0.971454 0.99257 0.781006 27729 1 76 0.00204635 527 0 1.94573e+08 0.0282374 621789 1.9603e+08 8.24397e+06 27793 9.68008e+07 0 0.190448 0.99257 0.775203 1.94573e+08 0.00252767 4.24404e+07 2.55695e+07 4.27251e+07 476 4.27783e+07 3.26412e+07 0.00228648 4.27788e+07 50.0003 0.00317191 0.994762 0 50.1671 GTEX-1AX9J-1426-SM-731BV 1 B1 2 pieces, patchy glandular/stromal hyeperplasia, patchy chronic prostatitis (rep encircled) 5.7 Prostate Prostate 0002367 563 467 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989089 185666 0.97034 0.990638 0.793958 23144 1 76 0.00313783 148 0 7.34068e+07 0.0293676 338352 7.41005e+07 4.53191e+06 23169 3.64848e+07 0 0.176382 0.990638 0.786525 7.34068e+07 0.00347289 1.59277e+07 5.57849e+06 1.60055e+07 169 1.60112e+07 1.17524e+07 0.0033051 1.603e+07 50.0294 0.00456612 0.992187 0 50.1218 GTEX-1AX9J-1626-SM-73KUI 1 B1 2 pieces, moderate chronic congestion/atalectasis; well fixed/defined bronchial mucosa, rep. ensquared 8.2 Lung Lung 0008952 568 462 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990754 336888 0.974157 0.992017 0.789701 24031 1 76 0.00431128 171 0 9.2646e+07 0.0253384 232259 9.33915e+07 4.28427e+06 24076 4.60999e+07 0 0.184457 0.992017 0.783397 9.2646e+07 0.00451198 2.05211e+07 7.68319e+06 2.07185e+07 201 2.07822e+07 1.65429e+07 0.0044115 2.05691e+07 49.7424 0.00248694 0.993281 0 50.2393 GTEX-1AX9J-1726-SM-731FF 1 B1 2 pieces, evidence of remote pancreatitis; Islets well visualized though not numerous (rep. delineated). 5.6 Pancreas Pancreas 0001150 570 460 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990981 394048 0.967858 0.992913 0.798233 23223 1 76 0.00344899 121 0 8.91521e+07 0.0319215 424649 8.97884e+07 1.09667e+07 23253 4.43498e+07 0 0.169626 0.992913 0.792576 8.91521e+07 0.00407279 2.00531e+07 2.37462e+07 2.03783e+07 143 2.03867e+07 2.13848e+07 0.00376028 2.02072e+07 49.7789 0.00472944 0.994846 0 50.4022 GTEX-1AX9J-1826-SM-731FM 1 B1 6 pieces, squamous mucosa up to ~0.5mm, well preserved; few submucosal mucus glands, encircled 9.2 Esophagus Esophagus - Mucosa 0006920 576 454 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.990174 421451 0.971452 0.992815 0.798026 21739 1 76 0.00302574 133 0 6.51526e+07 0.0282192 143065 6.56241e+07 7.46614e+06 21757 3.2392e+07 0 0.173426 0.992815 0.792293 6.51526e+07 0.00385436 1.45993e+07 7.99878e+06 1.45891e+07 137 1.47228e+07 1.30148e+07 0.00343895 1.46306e+07 49.843 0.00218007 0.995455 0 49.9827 GTEX-1AX9J-1926-SM-73KUM 1 B1 6 pieces, confirmed target muscularis, few peripheral nerve elements noted/encircled 7.6 Esophagus Esophagus - Muscularis 0004648 580 450 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990363 306106 0.975326 0.991539 0.829316 22310 1 76 0.00404135 216 0 8.97614e+07 0.0244034 548744 9.05273e+07 4.2698e+06 22330 4.46614e+07 0 0.14601 0.991539 0.822299 8.97614e+07 0.00428489 1.931e+07 7.47516e+06 1.94769e+07 215 1.94786e+07 1.55228e+07 0.00416298 1.94127e+07 49.9153 0.00606164 0.992715 0 50.2152 GTEX-1AX9J-2026-SM-731AV 1 B1 6 pieces, confirmed target muscularis 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 582 448 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.99051 202742 0.974845 0.992352 0.817625 21940 1 76 0.00291398 147 0 6.76224e+07 0.0248541 382332 6.81436e+07 2.93201e+06 21965 3.36488e+07 0 0.15722 0.992352 0.811372 6.76224e+07 0.00328699 1.46365e+07 5.42095e+06 1.4765e+07 156 1.47784e+07 1.17291e+07 0.00310014 1.47374e+07 49.9307 0.00561068 0.994194 0 50.2185 GTEX-1AX9J-2126-SM-731DD 1 B1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 585 445 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.984631 148744 0.964255 0.985881 0.750699 22898 1 76 0.00363914 132 0 6.75925e+07 0.0352056 419326 6.85606e+07 8.26048e+06 22940 3.3564e+07 0 0.213556 0.985881 0.7401 6.75925e+07 0.00436675 1.47517e+07 6.45841e+06 1.49148e+07 159 1.49315e+07 8.68991e+06 0.00400248 1.48188e+07 49.8107 0.00611614 0.98713 0 50.2749 GTEX-1AX9J-2226-SM-731CW 1 B1 2 pieces, 5-10% fascia/vascular elements 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 588 442 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.986811 137801 0.971155 0.988532 0.794107 21807 1 76 0.0030934 136 0 6.27349e+07 0.0285338 289990 6.34627e+07 3.59256e+06 21826 3.11804e+07 0 0.177048 0.988532 0.785 6.27349e+07 0.00360408 1.37908e+07 6.30755e+06 1.38944e+07 153 1.39244e+07 9.50772e+06 0.00334829 1.38624e+07 49.8885 0.00456945 0.990253 0 50.1871 GTEX-1AX9J-2526-SM-73KUY 1 B1 6 pieces, target muscularis, adherent fibroadipose tissue on most sections, 1-2mm nubbins, rep. delineated 7.4 Colon Colon - Sigmoid 0001159 601 429 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989874 317275 0.974746 0.990997 0.817705 23530 1 76 0.00410789 214 0 9.8114e+07 0.0249582 540295 9.90053e+07 4.91158e+06 23562 4.88029e+07 0 0.157041 0.990997 0.810343 9.8114e+07 0.00440995 2.13544e+07 8.83906e+06 2.15232e+07 241 2.15608e+07 1.64519e+07 0.00425875 2.14273e+07 49.8448 0.00545723 0.99212 0 50.1968 GTEX-1AX9J-2626-SM-731EK 1 B1 6 pieces, mucosa 0.6-1.0mm, 30-40% of thickness. Some foci approach score 2 near luminal surface. 6.6 Stomach Stomach 0000945 603 427 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.989306 358078 0.978894 0.991012 0.84134 23492 1 76 0.00336407 314 0 9.84772e+07 0.0208263 778831 9.93703e+07 1.25047e+07 23515 4.89806e+07 0 0.137554 0.991012 0.833778 9.84772e+07 0.00390536 2.20005e+07 5.25126e+07 2.22457e+07 265 2.23647e+07 2.09291e+07 0.00363425 2.20414e+07 49.636 0.00783766 0.992719 0 50.2771 GTEX-1AX9J-5001-SM-AN463 B1 Muscle Muscle - Skeletal 0011907 482 ChIP-Seq GTEX-1AX9J-5007-SM-AN464 B1 Heart Heart - Left Ventricle 0006566 540 ChIP-Seq GTEX-1AX9K-0001-SM-7J39L B1 Blood Whole Blood 0013756 -161 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AX9K-0001-SM-7MD4I B1 Blood Whole Blood 0013756 -161 BP-53661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/09/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AX9K-0006-SM-9KNVP B1 9 Blood Whole Blood 0013756 -161 BP-53659 RNA isolation_PAXgene Blood RNA (Manual) 06/09/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.982678 1.28815e+06 0.941052 0.984093 0.768098 18480 1 76 0.00267833 153 0 9.86778e+07 0.0583855 274317 1.00273e+08 1.14204e+07 18493 4.91522e+07 0 0.172954 0.984093 0.75588 9.86778e+07 0.00420953 2.15299e+07 1.09088e+08 2.16995e+07 176 2.17532e+07 2.12528e+07 0.00344283 2.16396e+07 49.8691 0.0027357 0.985508 0 50.1961 GTEX-1AX9K-0008-SM-EVYB1 B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 408 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.982176 3.32769e+06 0.84114 0.983118 0.671803 21703 1 76 0.00150313 287 0 1.35301e+08 0.15769 1.01077e+06 1.37624e+08 5.64151e+06 21731 6.74133e+07 0 0.169337 0.983118 0.660461 1.35301e+08 0.00227668 2.53719e+07 2.30783e+08 2.69216e+07 279 2.69278e+07 2.76172e+07 0.00188953 2.55244e+07 48.6622 0.00734444 0.984059 0 51.4817 GTEX-1AX9K-0126-SM-7PC1B 1 B1 2 pieces; 60% & 30% external untrimmed fat 8.5 Adrenal Gland Adrenal Gland 0002369 272 744 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988154 461479 0.975097 0.991576 0.83587 24077 1 76 0.00333428 273 0 1.0325e+08 0.0246017 2.14332e+06 1.04127e+08 1.72e+07 24105 5.12908e+07 0 0.139227 0.991576 0.828828 1.0325e+08 0.0043464 2.26222e+07 1.57174e+07 2.2826e+07 294 2.29681e+07 1.68143e+07 0.00383859 2.28009e+07 49.8174 0.0205836 0.994998 0 50.2243 GTEX-1AX9K-0226-SM-793CM 1 B1 2 pieces; mildly congested, well preserved with well defined lymphoid tissue 7.7 Spleen Spleen 0002106 276 740 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.991341 386933 0.963085 0.992811 0.758718 23327 1 76 0.00347827 124 0 6.14999e+07 0.0357434 395124 6.19452e+07 8.73304e+06 23353 3.05869e+07 0 0.204367 0.992811 0.753263 6.14999e+07 0.0041539 1.35001e+07 8.454e+06 1.3518e+07 137 1.35725e+07 9.35938e+06 0.00381559 1.35325e+07 49.9262 0.00637861 0.994282 0 50.0332 GTEX-1AX9K-0326-SM-7DHM9 1 B1 2 pieces; large [50%] intimal plaque in 1 piece, none in other; 60% is external fat 8.1 Blood Vessel Artery - Coronary 0001621 280 736 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990742 87962 0.973617 0.991766 0.824806 22235 1 76 0.00341223 152 0 7.00561e+07 0.0260238 253295 7.06377e+07 5.47992e+06 22257 3.48552e+07 0 0.148811 0.991766 0.818014 7.00561e+07 0.00527762 1.51634e+07 4.85175e+06 1.52820e+07 154 1.52857e+07 1.34046e+07 0.00434397 1.52278e+07 49.9051 0.00358583 0.992789 0 50.1948 GTEX-1AX9K-0426-SM-73KUG 1 B1 2 pieces; 5% & 10% internal fat 7.4 Heart Heart - Atrial Appendage 0006631 282 734 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993105 289585 0.976435 0.993971 0.810667 22693 1 76 0.00385466 267 0 1.03278e+08 0.0233531 1.91896e+06 1.03904e+08 4.54917e+06 22723 5.14715e+07 0 0.165768 0.993971 0.805779 1.03278e+08 0.00361603 2.18358e+07 2.20891e+07 2.24067e+07 288 2.22891e+07 1.53195e+07 0.00373545 2.20412e+07 49.7204 0.0184686 0.994837 0 50.6452 GTEX-1AX9K-0526-SM-73KV1 1 B1 2 pieces; patchy hypereosinophilia; no scars 7 Heart Heart - Left Ventricle 0006566 278 738 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992488 250547 0.981725 0.99354 0.825503 21792 1 76 0.00383963 368 0 1.10978e+08 0.0181229 3.40336e+06 1.11699e+08 5.04989e+06 21808 5.5305e+07 0 0.156222 0.99354 0.820171 1.10978e+08 0.00381497 2.40162e+07 2.76518e+07 2.46798e+07 339 2.45633e+07 1.44129e+07 0.00382732 2.42312e+07 49.6597 0.0304689 0.994592 0 50.6814 GTEX-1AX9K-0626-SM-73KVD 1 B1 2 pieces; 10% external fat on 1 piece 7 Thyroid Thyroid 0002046 287 729 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991442 387223 0.969017 0.992435 0.755066 25330 1 76 0.00406272 277 0 1.1338e+08 0.0306919 351127 1.14244e+08 5.46698e+06 25374 5.64398e+07 0 0.213951 0.992435 0.749354 1.1338e+08 0.00407522 2.48831e+07 9.74282e+06 2.50228e+07 276 2.51032e+07 1.94065e+07 0.00406897 2.49065e+07 49.8033 0.00307348 0.993429 0 50.1399 GTEX-1AX9K-0726-SM-73KYR 1 B1 6 pieces; minimal plaque; up to 1 mm fatty adventitia 7.4 Blood Vessel Artery - Aorta 0001496 288 728 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993759 243129 0.975238 0.994894 0.791177 23559 1 76 0.00261935 165 0 7.7024e+07 0.0243886 318615 7.74193e+07 7.62678e+06 23588 3.83781e+07 0 0.18406 0.994894 0.787138 7.7024e+07 0.00310892 1.70051e+07 5.99777e+06 1.70494e+07 178 1.70704e+07 1.33114e+07 0.00286386 1.70715e+07 50.0016 0.00411545 0.996029 0 50.065 GTEX-1AX9K-0826-SM-731F9 1 B1 2 pieces; patchy areas of interstitial fibrosis 7.1 Lung Lung 0008952 294 722 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991506 228829 0.981855 0.993175 0.828866 21757 1 76 0.00346053 118 0 5.67676e+07 0.0174254 416055 5.71577e+07 6.82344e+06 21774 2.82313e+07 0 0.15299 0.993175 0.823209 5.67676e+07 0.00389199 1.26759e+07 4.8594e+06 1.27349e+07 128 1.2783e+07 1.09192e+07 0.0036759 1.27165e+07 49.8696 0.00727907 0.994845 0 50.116 GTEX-1AX9K-0926-SM-7939G 1 B1 2 pieces; 5% fibrous content in 1 piece 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 291 725 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993254 202900 0.976049 0.99423 0.820259 22078 1 76 0.00210859 142 0 6.34004e+07 0.023671 713484 6.37684e+07 5.15642e+06 22096 3.15592e+07 0 0.15579 0.99423 0.815526 6.34004e+07 0.00273006 1.40334e+07 5.69708e+06 1.4062e+07 163 1.41167e+07 1.02179e+07 0.00241902 1.40371e+07 49.8586 0.0111887 0.995206 0 50.0508 GTEX-1AX9K-1026-SM-73KU4 1 B1 6 pieces; well dissected muscle; well preserved ganglion cells 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 307 709 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992134 273890 0.975049 0.993254 0.82609 22837 1 76 0.00397431 217 0 9.20503e+07 0.0246855 892007 9.26754e+07 3.82129e+06 22866 4.58289e+07 0 0.148959 0.993254 0.820517 9.20503e+07 0.00413553 1.98781e+07 7.52541e+06 2.01214e+07 223 2.01001e+07 1.62421e+07 0.00405483 1.99999e+07 49.8751 0.00962506 0.994374 0 50.3042 GTEX-1AX9K-1126-SM-731DQ 1 B1 6 pieces; well preserved mucosa; 4 pieces contain submucosal mucous glands up to 10% 8.2 Esophagus Esophagus - Mucosa 0006920 315 701 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.989966 341570 0.97284 0.992369 0.786755 22824 1 76 0.00307036 128 0 6.24516e+07 0.0268876 181485 6.29319e+07 6.9154e+06 22846 3.10439e+07 0 0.186086 0.992369 0.780751 6.24516e+07 0.00386388 1.40511e+07 7.41916e+06 1.40103e+07 132 1.41194e+07 1.19713e+07 0.00346616 1.40852e+07 49.9393 0.00288383 0.994772 0 49.9273 GTEX-1AX9K-1226-SM-793CN 1 B1 6 pieces; well dissected muscle 7.8 Esophagus Esophagus - Muscularis 0004648 319 697 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993931 442393 0.974769 0.995117 0.818804 22064 1 76 0.00284747 150 0 7.17348e+07 0.0249514 584885 7.20868e+07 1.01406e+07 22086 3.57337e+07 0 0.155965 0.995117 0.814806 7.17348e+07 0.00337258 1.5466e+07 5.9402e+06 1.55173e+07 161 1.55642e+07 1.31544e+07 0.00310971 1.55004e+07 49.8972 0.00811362 0.996304 0 50.0828 GTEX-1AX9K-1526-SM-73KVP 1 B1 4 pieces; well preserved glands 6 Prostate Prostate 0002367 334 682 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988659 234370 0.963993 0.98987 0.753418 25595 1 76 0.00417332 197 0 9.19465e+07 0.0358009 1.16845e+06 9.28874e+07 4.45653e+06 25640 4.57264e+07 0 0.210574 0.98987 0.745787 9.19465e+07 0.00453079 1.99174e+07 8.83904e+06 2.01852e+07 216 2.01826e+07 1.18342e+07 0.00435184 2.00325e+07 49.8133 0.0125792 0.991082 0 50.3339 GTEX-1AX9K-1626-SM-73KUS 1 B1 6 pieces; well dissected muscle; a 0.7mm mucosal contaminant (carry-over) labeled 7.9 Colon Colon - Sigmoid 0001159 338 678 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993125 263628 0.976365 0.994103 0.840127 22530 1 76 0.00390513 216 0 9.37635e+07 0.0233053 767442 9.43197e+07 4.19408e+06 22549 4.67099e+07 0 0.136238 0.994103 0.835172 9.37635e+07 0.00383976 2.01788e+07 8.34675e+06 2.04517e+07 254 2.047e+07 1.74182e+07 0.00387248 2.02514e+07 49.7317 0.0081366 0.99508 0 50.3359 GTEX-1AX9K-1826-SM-731CY 2 B1 3 pieces; spermatogenesis with reduced number of mature sperm; colon mucosa/submucosa (4 sq mm, labeled) attached to 1 piece 5.6 Testis Testis 0000473 344 672 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.989266 270011 0.930826 0.991142 0.703598 32284 1 76 0.00298214 151 0 7.91336e+07 0.0689266 742394 7.98408e+07 3.58576e+06 32344 3.93702e+07 0 0.227228 0.991142 0.697365 7.91336e+07 0.00332426 1.672e+07 9.41718e+06 1.68235e+07 157 1.68939e+07 1.18127e+07 0.00315288 1.67801e+07 49.8311 0.00929843 0.993017 0 50.1543 GTEX-1AX9K-2026-SM-731D1 1 B1 2 pieces; PanIN 1A lesions in 1 labeled focus. 5% internal fat 5.8 Pancreas Pancreas 0001150 344 672 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 RNASEQ 0.992133 477354 0.974613 0.99388 0.852522 21040 1 76 0.00303738 109 0 8.5134e+07 0.0252032 232483 8.56583e+07 3.75045e+06 21054 4.23885e+07 0 0.122091 0.99388 0.847304 8.5134e+07 0.00321387 1.9606e+07 2.52942e+07 1.97088e+07 135 1.97463e+07 2.60041e+07 0.00312547 1.97146e+07 49.9599 0.00271408 0.995626 0 50.1307 GTEX-1AX9K-2126-SM-72D7K 1 B1 2 pieces; 60% lip and fat on 1 piece, 10% on other (both labeled) 7.5 Salivary Gland Minor Salivary Gland 0006330 351 665 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.990945 142782 0.968938 0.992543 0.755024 23913 1 76 0.00279135 119 0 5.95109e+07 0.029609 176435 5.9958e+07 4.26912e+06 23934 2.95952e+07 0 0.213914 0.992543 0.749394 5.95109e+07 0.00342275 1.31608e+07 5.53754e+06 1.31461e+07 130 1.31715e+07 9.88464e+06 0.00310655 1.3224e+07 50.0994 0.00294264 0.994142 0 49.972 GTEX-1AX9K-2326-SM-73KWU 1 B1 6 pieces; well trimmed; up to 10% dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 374 642 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.988628 287734 0.974388 0.989805 0.819999 23185 1 76 0.00251194 159 0 6.84325e+07 0.0253283 438081 6.91373e+07 6.24427e+06 23205 3.40902e+07 0 0.15439 0.989805 0.811639 6.84325e+07 0.00312164 1.50809e+07 6.14519e+06 1.51088e+07 160 1.51279e+07 1.28004e+07 0.00281643 1.51421e+07 50.0234 0.00633639 0.990982 0 50.0463 GTEX-1AX9K-2426-SM-73KZ4 1 B1 2 pieces; 1 piece contains hair and sweat glands (labeled) 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 375 641 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993964 249090 0.977667 0.995134 0.81298 22421 1 76 0.00249803 150 0 6.88539e+07 0.0220411 209585 6.91906e+07 6.70192e+06 22443 3.43157e+07 0 0.164688 0.995134 0.809024 6.88539e+07 0.0030648 1.52385e+07 5.57866e+06 1.5274e+07 154 1.53057e+07 1.3512e+07 0.00278108 1.52855e+07 49.967 0.0030291 0.996304 0 50.0583 GTEX-1AX9K-2526-SM-7DUG4 1 B1 2 pieces; well trimmed nerve with 20% internal fat 7.4 Nerve Nerve - Tibial 0001323 377 639 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.98955 236406 0.963645 0.989436 0.71179 25270 1 76 0.00295694 244 0 1.00383e+08 0.0360654 218267 1.01455e+08 1.04124e+07 25332 4.98846e+07 0 0.251855 0.989436 0.704271 1.00383e+08 0.00431756 2.2084e+07 9.32858e+06 2.20692e+07 223 2.21796e+07 1.52244e+07 0.00363733 2.19731e+07 49.7662 0.00215137 0.989321 0 49.9831 GTEX-1AX9K-2626-SM-793CO 1 B1 2 pieces; thin fibrous intimal plaques; 20% & 40% fibrofatty external stroma 7.7 Blood Vessel Artery - Tibial 0007610 382 634 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992933 360265 0.975925 0.994287 0.823013 21477 1 76 0.00284725 140 0 6.46698e+07 0.0236288 303942 6.50413e+07 8.85159e+06 21490 3.22037e+07 0 0.152912 0.994287 0.818311 6.46698e+07 0.00357513 1.40114e+07 4.88336e+06 1.40216e+07 146 1.40603e+07 1.26065e+07 0.00321069 1.40589e+07 49.9974 0.00467306 0.995641 0 50.0182 GTEX-1AX9K-2726-SM-7DHMA 1 B1 2 pieces; 10% internal fat 8.4 Muscle Muscle - Skeletal 0011907 383 633 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991897 113503 0.98131 0.993187 0.875729 19479 1 76 0.00321875 138 0 6.85112e+07 0.0184465 718708 6.89811e+07 5.13194e+06 19490 3.41302e+07 0 0.105581 0.993187 0.869763 6.85112e+07 0.00497016 1.47987e+07 6.56229e+06 1.50391e+07 156 1.50518e+07 1.43646e+07 0.00409332 1.48619e+07 49.6826 0.0104189 0.994477 0 50.4028 GTEX-1AX9K-5010-SM-AN45D B1 Muscle Muscle - Skeletal 0011907 384 ChIP-Seq GTEX-1AX9K-5022-SM-AN45F B1 Heart Heart - Left Ventricle 0006566 281 ChIP-Seq GTEX-1AYCT-0004-SM-7J39Y B1 Blood Whole Blood 0013756 -11 BP-53859 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/13/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AYCT-0004-SM-7MD4U B1 Blood Whole Blood 0013756 -11 BP-53859 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/13/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AYCT-0005-SM-7SB6V B1 9.1 Blood Whole Blood 0013756 -11 BP-53858 RNA isolation_PAXgene Blood RNA (Manual) 06/13/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.971835 1.30063e+06 0.937588 0.974 0.734442 18526 1 76 0.0023457 98 0 8.63854e+07 0.0615705 110444 8.86914e+07 9.38599e+06 18542 4.29878e+07 0 0.203146 0.974 0.715346 8.63854e+07 0.00421325 1.92712e+07 1.3958e+08 1.94281e+07 130 1.94887e+07 2.02744e+07 0.0032774 1.9423e+07 49.9155 0.00124526 0.976165 0 50.2027 GTEX-1AYCT-0008-SM-EVYAX B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 592 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.99455 565593 0.979472 0.995158 0.864775 20508 1 76 0.0015627 286 0 1.16823e+08 0.020213 183401 1.17391e+08 5.01185e+06 20525 5.82652e+07 0 0.114697 0.995158 0.860587 1.16823e+08 0.00243833 2.61925e+07 1.54924e+07 2.64806e+07 313 2.65124e+07 3.11455e+07 0.00200025 2.62295e+07 49.7319 0.0015623 0.995765 0 50.2735 GTEX-1AYCT-0226-SM-73KVB 0 B1 2 pieces; one piece includes ~30% fat and connective tissue, attached portion of large vessel in second piece 6.3 Thyroid Thyroid 0002046 446 521 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988789 368001 0.965906 0.989514 0.769287 25258 1 76 0.00397226 209 0 9.80421e+07 0.0337997 478271 9.90811e+07 4.99133e+06 25297 4.87322e+07 0 0.196619 0.989514 0.76122 9.80421e+07 0.00433395 2.15113e+07 9.8581e+06 2.15613e+07 223 2.16467e+07 1.55862e+07 0.00415297 2.14972e+07 49.8267 0.00482707 0.990239 0 50.058 GTEX-1AYCT-0326-SM-73KVN 1 B1 6 pieces; some atherosclerosis 8.2 Blood Vessel Artery - Aorta 0001496 452 515 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991125 348181 0.978925 0.992387 0.861073 22106 1 76 0.00398112 218 0 9.91719e+07 0.0206271 212915 9.99327e+07 4.51304e+06 22123 4.93463e+07 0 0.117851 0.992387 0.854518 9.91719e+07 0.0043 2.12402e+07 7.44306e+06 2.14705e+07 226 2.14865e+07 2.13343e+07 0.00414036 2.1351e+07 49.8418 0.00213058 0.993649 0 50.2697 GTEX-1AYCT-0426-SM-73KVZ 1 B1 2 pieces 7.8 Heart Heart - Left Ventricle 0006566 454 513 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991796 353350 0.985426 0.992636 0.847937 21789 1 76 0.00369158 373 0 1.33107e+08 0.0143125 2.28998e+06 1.34094e+08 5.8544e+06 21809 6.63377e+07 0 0.137489 0.992636 0.841693 1.33107e+08 0.00340941 2.89933e+07 4.00843e+07 2.94206e+07 341 2.95573e+07 2.10312e+07 0.00355061 2.89796e+07 49.5065 0.0170774 0.993476 0 50.3657 GTEX-1AYCT-0526-SM-7RHHS 0 B1 2 pieces; one piece includes ~10% fat 7.9 Heart Heart - Atrial Appendage 0006631 455 512 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.993899 282849 0.97864 0.995527 0.834383 24285 1 76 0.00200329 375 0 1.5372e+08 0.0210003 1.69689e+06 1.5441e+08 1.24367e+07 24319 7.66014e+07 0 0.144257 0.995527 0.83065 1.5372e+08 0.00335256 3.33787e+07 2.41254e+07 3.33633e+07 333 3.3392e+07 2.54328e+07 0.00267682 3.35546e+07 50.1215 0.0109895 0.997155 0 49.9885 GTEX-1AYCT-0626-SM-7EPI5 1 B1 2 pieces; calcific atherosclerosis, abundant attached fat (30 and 80%) 7 Blood Vessel Artery - Coronary 0001621 457 510 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.991307 245147 0.975109 0.993509 0.798745 24985 1 76 0.00260315 275 0 1.11715e+08 0.0245952 453281 1.12445e+08 1.34616e+07 25032 5.56397e+07 0 0.176364 0.993509 0.793561 1.11715e+08 0.00736842 2.45806e+07 1.0576e+07 2.49045e+07 266 2.49523e+07 1.9025e+07 0.0049805 2.47664e+07 49.8131 0.00403114 0.995711 0 50.3272 GTEX-1AYCT-0726-SM-7IGNG 1 B1 2 pieces; includes pleura (not target region), many pulmonary macrophages, some collapse/fibrosis/larger vessels present 6.2 Lung Lung 0008952 460 507 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994617 294446 0.974668 0.995383 0.819044 23752 1 76 0.0020658 271 0 9.05403e+07 0.0249947 536548 9.09603e+07 5.77423e+06 23778 4.51246e+07 0 0.155623 0.995383 0.815263 9.05403e+07 0.00274456 2.00564e+07 8.85097e+06 2.0324e+07 257 2.02444e+07 1.59099e+07 0.00240492 2.02033e+07 49.9491 0.00589871 0.996149 0 50.3313 GTEX-1AYCT-1026-SM-79ONR 1 B1 2 pieces; spermatogenesis is present/reduced 6.6 Testis Testis 0000473 471 496 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99198 190205 0.941008 0.992357 0.728728 30772 1 76 0.00311914 119 0 6.27113e+07 0.0587338 771245 6.31943e+07 3.451e+06 30821 3.12483e+07 0 0.21228 0.992357 0.723159 6.27113e+07 0.00434554 1.34871e+07 7.6038e+06 1.35517e+07 130 1.35788e+07 9.36889e+06 0.00373211 1.3479e+07 49.8156 0.0122044 0.992734 0 50.1196 GTEX-1AYCT-1126-SM-79OO8 1 B1 2 pieces; incomplete section (?poor fixation) 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 473 494 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993343 136274 0.977817 0.993594 0.824949 23101 1 76 0.00283875 169 0 7.18245e+07 0.0219166 597268 7.22876e+07 4.06518e+06 23122 3.57926e+07 0 0.152868 0.993594 0.819665 7.18245e+07 0.00410424 1.5901e+07 6.3581e+06 1.60462e+07 182 1.60319e+07 1.19364e+07 0.00347133 1.59308e+07 49.8418 0.00826239 0.993845 0 50.2272 GTEX-1AYCT-1226-SM-7EPGH 1 B1 2 pieces; 10-20% attached fat 6.9 Pancreas Pancreas 0001150 475 492 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991358 158689 0.977413 0.993835 0.833932 22273 1 76 0.00316801 100 0 8.40422e+07 0.022274 218657 8.45635e+07 1.14511e+07 22292 4.18627e+07 0 0.143481 0.993835 0.828792 8.40422e+07 0.0117811 1.91403e+07 2.19981e+07 1.95395e+07 113 1.95029e+07 2.33602e+07 0.00746383 1.93783e+07 49.8397 0.00258571 0.996312 0 50.516 GTEX-1AYCT-1326-SM-7MKHB 1 B1 6 pieces; 3 include mucosa and muscularis, 3 are mucosa only 6.1 Stomach Stomach 0000945 479 488 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.973767 212919 0.980441 0.979093 0.846631 22949 1 76 0.0036068 367 0 8.6554e+07 0.0192033 871520 8.84023e+07 1.29001e+07 22965 4.29126e+07 0 0.133811 0.979093 0.82893 8.6554e+07 0.00491807 1.98326e+07 1.00033e+08 1.99311e+07 273 2.01495e+07 2.18814e+07 0.00425887 2.00582e+07 49.8864 0.00985857 0.984418 0 50.1239 GTEX-1AYCT-1426-SM-7DUG1 0 B1 5 pieces; target muscularis 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 480 487 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992468 309514 0.971276 0.99323 0.795426 24445 1 76 0.00271172 279 0 1.01481e+08 0.0284168 609711 1.02173e+08 8.91161e+06 24488 5.05409e+07 0 0.17585 0.99323 0.790041 1.01481e+08 0.00404614 2.20255e+07 9.48515e+06 2.22621e+07 297 2.22808e+07 1.65504e+07 0.00337842 2.20794e+07 49.773 0.00596746 0.993992 0 50.2671 GTEX-1AYCT-1526-SM-73KWC 0 B1 6 pieces; target muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 485 482 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990791 462341 0.967035 0.992278 0.816961 22774 1 76 0.00402994 210 0 9.12017e+07 0.0327114 807615 9.19114e+07 4.30793e+06 22797 4.53848e+07 0 0.150074 0.992278 0.810653 9.12017e+07 0.00432191 1.94976e+07 1.60513e+07 1.98279e+07 228 1.97896e+07 1.42796e+07 0.0041757 1.96696e+07 49.848 0.00878688 0.993766 0 50.4198 GTEX-1AYCT-1826-SM-731EG 1 B1 7 pieces; multiple pieces with variable composition (mucosa only, muscularis only, mucosa and muscularis) 7.7 Colon Colon - Transverse 0001157 491 476 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.99077 242353 0.97436 0.992439 0.81366 22349 1 76 0.00324349 124 0 5.66253e+07 0.0253807 701700 5.70567e+07 7.26897e+06 22368 2.81531e+07 0 0.160701 0.992439 0.807508 5.66253e+07 0.00380375 1.24931e+07 5.20558e+06 1.26221e+07 138 1.26729e+07 8.89174e+06 0.00352315 1.25293e+07 49.7152 0.0122983 0.994108 0 50.2568 GTEX-1AYCT-1926-SM-793AE 1 B1 6 pieces; muscularis, 4 of 6 include strips of mucosa 8.8 Colon Colon - Sigmoid 0001159 492 475 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994659 382509 0.976511 0.995128 0.842681 21387 1 76 0.00177768 139 0 5.59807e+07 0.0230955 186165 5.62548e+07 2.78884e+06 21400 2.78627e+07 0 0.133831 0.995128 0.838575 5.59807e+07 0.00230556 1.21999e+07 4.11942e+06 1.22102e+07 139 1.22762e+07 1.10577e+07 0.00204149 1.21621e+07 49.7667 0.00330932 0.995598 0 50.021 GTEX-1AYCT-2026-SM-793CJ 1 B1 2 pieces 7.9 Nerve Nerve - Tibial 0001323 556 411 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993921 331450 0.976638 0.995098 0.779606 23048 1 76 0.00284191 161 0 7.6679e+07 0.0230491 151222 7.70568e+07 1.0489e+07 23081 3.82056e+07 0 0.197031 0.995098 0.775785 7.6679e+07 0.00330759 1.70448e+07 7.55962e+06 1.70439e+07 165 1.70965e+07 1.4115e+07 0.00307447 1.70812e+07 49.9775 0.00196248 0.996275 0 49.9986 GTEX-1AYCT-2126-SM-7PC3N 1 B1 2 pieces; atherosclerosis, focal medial calcification 7.9 Blood Vessel Artery - Tibial 0007610 566 401 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988094 408708 0.977871 0.991506 0.843029 22775 1 76 0.00331744 284 0 1.19336e+08 0.0216758 364879 1.20359e+08 2.02877e+07 22803 5.92677e+07 0 0.134843 0.991506 0.835868 1.19336e+08 0.00458039 2.56699e+07 1.02009e+07 2.59806e+07 309 2.61663e+07 2.56914e+07 0.00394674 2.58665e+07 49.7118 0.00303159 0.994917 0 50.3008 GTEX-1AYCT-2226-SM-7SB98 1 B1 2 pieces; adipose tissue with 30-50% vessels/nerve/connective tissue 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 592 375 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.9907 310392 0.961032 0.992541 0.65979 24785 1 76 0.00276364 148 0 7.96773e+07 0.0386863 273221 8.0276e+07 8.52147e+06 24842 3.96465e+07 0 0.301242 0.992541 0.654869 7.96773e+07 0.00385958 1.73768e+07 1.12007e+07 1.75483e+07 152 1.75708e+07 1.11834e+07 0.00331059 1.7501e+07 49.9004 0.00340352 0.994383 0 50.2455 GTEX-1AYCT-2426-SM-7IGQ3 1 B1 6 pieces; includes 5-20% internal/external fat, epidermis measures 47 microns 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 599 368 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99416 152988 0.971761 0.994422 0.796041 23439 1 76 0.0018754 164 0 6.82482e+07 0.0280179 749833 6.8631e+07 2.45355e+06 23466 3.40244e+07 0 0.17572 0.994422 0.791601 6.82482e+07 0.00219261 1.49156e+07 7.02288e+06 1.51945e+07 175 1.51242e+07 1.01901e+07 0.00203396 1.5003e+07 49.7989 0.0109256 0.994685 0 50.4633 GTEX-1AYCT-5001-SM-AN45K B1 Heart Heart - Left Ventricle 0006566 454 ChIP-Seq GTEX-1AYCT-5004-SM-AN45J B1 Lung Lung 0008952 460 ChIP-Seq GTEX-1AYD5-0003-SM-7J39P B1 Blood Whole Blood 0013756 296 BP-53859 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/13/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1AYD5-0003-SM-7MD4M B1 Blood Whole Blood 0013756 296 BP-53859 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/13/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1AYD5-0005-SM-7SB6L B1 7.6 Blood Whole Blood 0013756 258 BP-53858 RNA isolation_PAXgene Blood RNA (Manual) 06/13/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988392 975904 0.941674 0.991058 0.672518 21557 1 76 0.00354991 126 0 7.86774e+07 0.0572984 101324 7.93872e+07 9.20952e+06 21614 3.90546e+07 0 0.269156 0.991058 0.666504 7.86774e+07 0.00536945 1.69334e+07 4.10388e+07 1.71891e+07 131 1.72922e+07 1.32041e+07 0.00445723 1.70581e+07 49.6593 0.00127633 0.993724 0 50.3748 GTEX-1AYD5-0008-SM-EVYAY B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 385 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994366 821875 0.982255 0.99502 0.860848 21270 1 76 0.00164998 388 0 1.35011e+08 0.0174271 207681 1.35687e+08 5.40007e+06 21294 6.73158e+07 0 0.121407 0.99502 0.856561 1.35011e+08 0.00258054 3.04507e+07 1.30863e+07 3.06682e+07 343 3.07441e+07 3.54169e+07 0.00211495 3.04644e+07 49.7715 0.00153059 0.995675 0 50.1779 GTEX-1AYD5-0126-SM-7DUG5 1 B1 2 pieces; lobulated mature adipose tissue and septal vessels; focal mesothelial lining cells and chronic inflammatory infiltrate 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 287 939 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.988049 271243 0.972691 0.988769 0.798282 24387 1 76 0.00451638 209 0 1.02011e+08 0.0226685 293390 1.0317e+08 9.06887e+06 24421 5.05556e+07 0 0.174409 0.988769 0.789317 1.02011e+08 0.00582165 2.27709e+07 2.58581e+07 2.3006e+07 255 2.30869e+07 1.76544e+07 0.00516854 2.27687e+07 49.6531 0.00284375 0.98949 0 50.2568 GTEX-1AYD5-0226-SM-79ONV 1 B1 2 pieces; marked congestion, capsule is present (target is 5mm below) 6.6 Spleen Spleen 0002106 288 938 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.989776 197329 0.958212 0.989876 0.721611 24279 1 76 0.00399279 119 0 6.45544e+07 0.0404227 348496 6.52146e+07 3.91249e+06 24312 3.20882e+07 0 0.236601 0.989876 0.714305 6.45544e+07 0.00533744 1.41711e+07 1.05736e+07 1.42198e+07 133 1.42516e+07 8.6186e+06 0.00466505 1.41531e+07 49.8267 0.00534383 0.989976 0 50.0858 GTEX-1AYD5-0326-SM-7EWEO 2 B1 2 pieces; 30% and 10% external/internal fat; periductal and interstitial fibrosis with acinar atrophy; islets observed (rep. outlined), some chronic inflammation, focal PanIN 1A 6.4 Pancreas Pancreas 0001150 299 927 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.991335 310556 0.966286 0.993413 0.749073 26018 1 76 0.00317769 194 0 1.15642e+08 0.0332006 436689 1.16408e+08 1.20992e+07 26066 5.75505e+07 0 0.217213 0.993413 0.744139 1.15642e+08 0.00468257 2.56058e+07 2.36164e+07 2.58893e+07 204 2.60455e+07 2.40561e+07 0.00392856 2.56847e+07 49.6512 0.00375135 0.995491 0 50.2753 GTEX-1AYD5-0626-SM-7RHHT 1 B1 2 pieces; atherosclerotic plaque compromising lumen to ~50%; attached fat/vessels/nerve 1.5mm to 2.5mm thick 7.6 Blood Vessel Artery - Coronary 0001621 307 919 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99042 289658 0.97577 0.992808 0.798342 24482 1 76 0.00286532 276 0 1.01596e+08 0.0234377 155503 1.02332e+08 1.03992e+07 24510 5.05252e+07 0 0.177428 0.992808 0.7926 1.01596e+08 0.00416029 2.20839e+07 9.36211e+06 2.23048e+07 265 2.23401e+07 1.94269e+07 0.00351125 2.22832e+07 49.9362 0.0015196 0.995195 0 50.2487 GTEX-1AYD5-0726-SM-7SB6Y 1 B1 6 pieces; atherosclerotic plaque 6.5 Blood Vessel Artery - Aorta 0001496 309 917 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990564 160457 0.968435 0.992851 0.748378 23858 1 76 0.0030432 210 0 9.39337e+07 0.0312015 229092 9.46101e+07 1.09581e+07 23898 4.67251e+07 0 0.220058 0.992851 0.743027 9.39337e+07 0.00431315 2.01826e+07 8.90734e+06 2.04193e+07 230 2.04509e+07 1.52132e+07 0.00367671 2.03572e+07 49.8852 0.00242143 0.995137 0 50.2915 GTEX-1AYD5-0926-SM-793AF 0 B1 5 pieces; squamous mucosa and submucosal glands in 4 of 5 pieces (outlined); squamous epithelium ~0.35mm thick 8.5 Esophagus Esophagus - Mucosa 0006920 321 905 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992814 304837 0.973365 0.993696 0.787062 20830 1 76 0.00239966 122 0 6.06124e+07 0.0264242 179311 6.09969e+07 5.23307e+06 20842 3.01542e+07 0 0.186303 0.993696 0.7821 6.06124e+07 0.00302071 1.3694e+07 8.50507e+06 1.36279e+07 134 1.37435e+07 1.12663e+07 0.00270991 1.36348e+07 49.8015 0.00293967 0.994578 0 49.879 GTEX-1AYD5-1226-SM-7EWEP 1 B1 2 pieces; marked congestion; thick walled vessels (rep. arrows) and thick alveolar septa and collapsed alveoli suggestive of chronic pulmonary hypertension 6.3 Lung Lung 0008952 328 898 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989002 158403 0.971697 0.991066 0.711549 23592 1 76 0.00303506 113 0 5.50276e+07 0.0273396 196047 5.55236e+07 4.6914e+06 23625 2.73394e+07 0 0.260149 0.991066 0.705192 5.50276e+07 0.0043043 1.22693e+07 6.58285e+06 1.22995e+07 119 1.23348e+07 7.98908e+06 0.00366836 1.23449e+07 50.0206 0.00353087 0.993131 0 50.0614 GTEX-1AYD5-1726-SM-7RHFW 3 B1 6 pieces; moderately to severely autolyzed mucosa and well preserved muscularis, serositis 6 Colon Colon - Transverse 0001157 344 882 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991598 156878 0.971564 0.993741 0.787279 24901 1 76 0.00265733 274 0 1.05183e+08 0.0281571 686009 1.05845e+08 9.9038e+06 24932 5.2363e+07 0 0.184285 0.993741 0.782351 1.05183e+08 0.0041978 2.28533e+07 9.5771e+06 2.30942e+07 295 2.30966e+07 1.64944e+07 0.0034259 2.30653e+07 49.9661 0.00648124 0.995884 0 50.2621 GTEX-1AYD5-2126-SM-73KWQ 1 B1 2 pieces; patent lumina and no plaque identified 7.8 Blood Vessel Artery - Tibial 0007610 374 852 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99385 322019 0.974565 0.995044 0.834764 21392 1 76 0.00264897 168 0 8.12619e+07 0.0250574 200717 8.16667e+07 7.71999e+06 21412 4.04785e+07 0 0.139801 0.995044 0.830627 8.12619e+07 0.00327511 1.74036e+07 5.40355e+06 1.74904e+07 182 1.74817e+07 1.63445e+07 0.00296166 1.75047e+07 50.0329 0.00245776 0.996239 0 50.1244 GTEX-1AYD5-2226-SM-73KX3 1 B1 2 pieces; ~10% internal fat and nerve 7.9 Muscle Muscle - Skeletal 0011907 377 849 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.995029 231285 0.977469 0.996038 0.847933 20661 1 76 0.00257516 162 0 7.56533e+07 0.0222707 845048 7.59543e+07 6.98213e+06 20677 3.77187e+07 0 0.129535 0.996038 0.844574 7.56533e+07 0.0030194 1.6229e+07 7.41076e+06 1.63982e+07 178 1.63495e+07 1.46461e+07 0.00279706 1.63433e+07 49.9906 0.0111257 0.997047 0 50.2593 GTEX-1AYD5-2326-SM-73KXF 1 B1 2 pieces; mature adipose tissue and ~5 and 20% fibrovascular component and nerves (arrow); small fragment of skeletal muscle (outlined) 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 379 847 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993247 280100 0.97395 0.9944 0.790318 23526 1 76 0.00280136 163 0 7.82894e+07 0.0257109 321467 7.87303e+07 7.3925e+06 23552 3.89956e+07 0 0.183631 0.9944 0.785892 7.82894e+07 0.00340517 1.71835e+07 7.07457e+06 1.72244e+07 176 1.72466e+07 1.34806e+07 0.00310291 1.72516e+07 50.0072 0.00408314 0.995552 0 50.0593 GTEX-1AYD5-2426-SM-73KXR 1 B1 6 pieces; ~47um thick epidermis; essentially well trimmed except one piece containing ~15% external fat (outlined) 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 384 842 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99363 243405 0.973128 0.994823 0.808877 23691 1 76 0.0027716 154 0 7.29943e+07 0.0265886 258191 7.33741e+07 7.26324e+06 23717 3.63692e+07 0 0.164251 0.994823 0.804689 7.29943e+07 0.00341002 1.60701e+07 6.67142e+06 1.61082e+07 162 1.61235e+07 1.3478e+07 0.00309042 1.6142e+07 50.0287 0.00351883 0.996017 0 50.0593 GTEX-1AYD5-2626-SM-7PBXY 1 B1 6 pieces; insignificant internal/external fat 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 387 839 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986926 112665 0.975191 0.991226 0.820351 22856 1 76 0.00319484 160 0 7.28933e+07 0.0245897 442927 7.35385e+07 1.04678e+07 22874 3.62053e+07 0 0.15484 0.991226 0.813153 7.28933e+07 0.00549001 1.59938e+07 8.31014e+06 1.61487e+07 169 1.62005e+07 1.19011e+07 0.00433745 1.6239e+07 50.0593 0.00602306 0.995526 0 50.241 GTEX-1AYD5-2726-SM-7MXVG 0 B1 2 pieces; salivary gland elements embedded in ~40-50% fibrovascular and fatty stroma, focal collection of chronic inflammatory cells 7.7 Salivary Gland Minor Salivary Gland 0006330 389 837 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.972563 122497 0.968202 0.9824 0.760841 24694 1 76 0.00375426 138 0 7.27178e+07 0.0301039 176848 7.40205e+07 1.15824e+07 24725 3.58595e+07 0 0.207362 0.9824 0.74745 7.27178e+07 0.00483715 1.59814e+07 1.01298e+07 1.60111e+07 149 1.63275e+07 1.18586e+07 0.00429028 1.63414e+07 50.0212 0.00238917 0.992238 0 50.0464 GTEX-1AYD5-5001-SM-AN45G B1 Heart Heart - Left Ventricle 0006566 385 ChIP-Seq GTEX-1AYD5-5013-SM-AN45H B1 Muscle Muscle - Skeletal 0011907 385 ChIP-Seq GTEX-1B8KE-0004-SM-7J39M B1 Blood Whole Blood 0013756 -72 BP-53934 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/16/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B8KE-0004-SM-7MD4J B1 Blood Whole Blood 0013756 -72 BP-53934 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/16/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B8KE-0006-SM-7SB6W B1 9.2 Blood Whole Blood 0013756 -72 BP-53950 RNA isolation_PAXgene Blood RNA (Manual) 06/16/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989395 642296 0.940253 0.992304 0.683659 21269 1 76 0.00298893 135 0 8.11821e+07 0.0593412 168125 8.18117e+07 9.40072e+06 21318 4.0369e+07 0 0.256595 0.992304 0.678398 8.11821e+07 0.00439545 1.73428e+07 2.80267e+07 1.7539e+07 145 1.76234e+07 1.30883e+07 0.00369013 1.74881e+07 49.8074 0.00205502 0.995214 0 50.2813 GTEX-1B8KE-0008-SM-EVYB3 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 197 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994566 679770 0.979991 0.995153 0.858524 20870 1 76 0.00158817 284 0 1.17067e+08 0.0196947 177540 1.17637e+08 4.41298e+06 20891 5.83761e+07 0 0.121467 0.995153 0.854363 1.17067e+08 0.00239499 2.63031e+07 1.26329e+07 2.65256e+07 309 2.65593e+07 3.04466e+07 0.00199134 2.63406e+07 49.7932 0.00150922 0.99574 0 50.2105 GTEX-1B8KE-0126-SM-793AM 1 B1 2 pieces, patchy remote microinfarcts, rep. encircled 8.5 Heart Heart - Left Ventricle 0006566 124 959 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993403 384670 0.983293 0.99442 0.873899 19600 1 76 0.00216723 132 0 6.0075e+07 0.0163843 946156 6.04121e+07 4.84116e+06 19609 2.9873e+07 0 0.109394 0.99442 0.869023 6.0075e+07 0.00275995 1.32615e+07 6.12312e+06 1.33143e+07 155 1.33704e+07 1.05745e+07 0.00246329 1.32539e+07 49.7812 0.0156617 0.995437 0 50.0994 GTEX-1B8KE-0226-SM-7EWEK 1 B1 6 pieces, minimal atherosis 6.3 Blood Vessel Artery - Aorta 0001496 126 957 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992455 122145 0.977732 0.99428 0.861102 20998 1 76 0.0021771 136 0 6.00159e+07 0.02177 159879 6.03612e+07 5.13336e+06 21006 2.98828e+07 0 0.116629 0.99428 0.856177 6.00159e+07 0.00337483 1.296e+07 4.40808e+06 1.3041e+07 144 1.30438e+07 1.23651e+07 0.00277486 1.30599e+07 50.0309 0.00264871 0.996104 0 50.1559 GTEX-1B8KE-0326-SM-73KTY 1 B1 2 pieces, no abnormalities 7.9 Heart Heart - Atrial Appendage 0006631 128 955 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989858 289420 0.981807 0.990587 0.833413 22350 1 76 0.00409451 272 0 1.26449e+08 0.0179214 2.03975e+06 1.27651e+08 5.5007e+06 22370 6.30263e+07 0 0.148395 0.990587 0.825568 1.26449e+08 0.00380465 2.67167e+07 4.28313e+07 2.74417e+07 330 2.71485e+07 1.85822e+07 0.00394969 2.7092e+07 49.9479 0.0159792 0.991317 0 50.6693 GTEX-1B8KE-0426-SM-7189G 1 B1 2 pieces, 30-40% occlusive atherosis, rep delineated 7.7 Blood Vessel Artery - Coronary 0001621 132 951 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.965815 300880 0.973113 0.979419 0.857467 23040 1 76 0.00235159 214 0 9.61099e+07 0.0264469 448905 9.81295e+07 5.06807e+06 23054 4.71748e+07 0 0.115646 0.979419 0.83982 9.61099e+07 0.00537276 2.04095e+07 1.09981e+07 2.03947e+07 239 2.10104e+07 1.99172e+07 0.00384119 2.1042e+07 50.0375 0.00457462 0.993024 0 49.9819 GTEX-1B8KE-0626-SM-7189H 1 B1 2 pieces, mulitple micro-colloid cysts, otherwise no abnormalities 7.2 Thyroid Thyroid 0002046 136 947 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.968929 547708 0.962622 0.981718 0.761485 25220 1 76 0.00248232 377 0 1.23932e+08 0.0371082 457443 1.2624e+08 5.88167e+06 25272 6.09818e+07 0 0.201136 0.981718 0.747564 1.23932e+08 0.00522521 2.67703e+07 1.83896e+07 2.68489e+07 333 2.76338e+07 1.96164e+07 0.0038359 2.75104e+07 49.8882 0.0036236 0.994506 0 50.0733 GTEX-1B8KE-0726-SM-72D7G 1 B1 2 pieces, Islets moderately abundant, well-preserve, encircled 6.4 Pancreas Pancreas 0001150 139 944 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436 12/02/2014 TruSeq.v1 RNASEQ 0.992228 115002 0.970829 0.993965 0.799064 21440 1 76 0.00245312 104 0 5.77256e+07 0.0290122 95854 5.80761e+07 4.16401e+06 21459 2.87608e+07 0 0.171765 0.993965 0.794241 5.77256e+07 0.00332576 1.31455e+07 1.1683e+07 1.32359e+07 113 1.32438e+07 1.4337e+07 0.00288867 1.32377e+07 49.9886 0.00165049 0.995702 0 50.1713 GTEX-1B8KE-0826-SM-72D6S 1 B1 2 pieces, ~20% fascia/vascular elements, rep. delineated 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 142 941 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122 11/06/2014 TruSeq.v1 RNASEQ 0.994253 76357 0.976901 0.994877 0.840905 21414 1 76 0.00230874 159 0 6.95518e+07 0.022768 300001 6.991e+07 4.04636e+06 21428 3.46932e+07 0 0.135996 0.994877 0.836597 6.95518e+07 0.0028539 1.52562e+07 4.86561e+06 1.53384e+07 175 1.529e+07 1.21876e+07 0.00258115 1.5349e+07 50.0964 0.00429125 0.9955 0 50.1342 GTEX-1B8KE-0926-SM-7189I 1 B1 2 pieces, all cortex, few adherent fat nubbins up to ~2.5mm, rep.delineated 9.2 Adrenal Gland Adrenal Gland 0002369 147 936 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6121 11/14/2014 TruSeq.v1 RNASEQ 0.967665 381462 0.97584 0.98125 0.832464 24325 1 76 0.00235293 373 0 1.18472e+08 0.0236995 959668 1.20736e+08 5.16421e+06 24363 5.82467e+07 0 0.143376 0.98125 0.816856 1.18472e+08 0.00532981 2.60132e+07 1.01743e+07 2.5952e+07 343 2.68333e+07 2.23315e+07 0.00382076 2.66817e+07 49.8583 0.0079485 0.994836 0 49.9411 GTEX-1B8KE-1026-SM-731EQ 1 B1 2 pieces, hyperplastic glandular pattern 7.1 Prostate Prostate 0002367 150 933 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990649 1.30849e+06 0.966755 0.992491 0.775108 28495 1 76 0.00340605 529 0 2.09598e+08 0.0328838 705231 2.11184e+08 2.72712e+07 28570 1.04168e+08 0 0.191647 0.992491 0.769288 2.09598e+08 0.00395489 4.60176e+07 2.43343e+07 4.62861e+07 460 4.66081e+07 3.26916e+07 0.00367996 4.60628e+07 49.7058 0.00333942 0.994333 0 50.1454 GTEX-1B8KE-1126-SM-7EPHI 0 B1 6 pieces, no dermal fat; squamous epithelium is ~30-40microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 157 926 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990669 171343 0.970662 0.992973 0.79659 23898 1 76 0.00312569 166 0 8.49214e+07 0.029113 524904 8.55224e+07 1.13025e+07 23928 4.23103e+07 0 0.174072 0.992973 0.790992 8.49214e+07 0.0115503 1.85324e+07 1.0639e+07 1.88186e+07 150 1.88352e+07 1.417e+07 0.00732824 1.86944e+07 49.8123 0.00613762 0.995278 0 50.3832 GTEX-1B8KE-1226-SM-73KWK 1 B1 2 pieces gynecomastoid stromal and ductal (rep delineated) hyperplasia 6 Breast Breast - Mammary Tissue 0008367 161 922 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991653 134901 0.974336 0.992782 0.821255 22253 1 76 0.00257169 149 0 6.29327e+07 0.0253323 374143 6.33903e+07 6.37345e+06 22277 3.13433e+07 0 0.153081 0.992782 0.815327 6.29327e+07 0.00319707 1.38267e+07 5.4592e+06 1.38501e+07 153 1.3864e+07 1.11926e+07 0.00288402 1.38848e+07 50.0374 0.00590221 0.99391 0 50.0422 GTEX-1B8KE-1326-SM-73KVI 1 B1 6 pieces, well - preserved mucosa up to ~1.2mm, 30-25% thickness. Basal microcystic dilation or gastropathy, delineated. 7 Stomach Stomach 0000945 168 915 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990505 198807 0.979463 0.991358 0.824722 23502 1 76 0.00410115 324 0 1.05298e+08 0.0202071 721236 1.06216e+08 4.72274e+06 23535 5.24694e+07 0 0.154741 0.991358 0.817594 1.05298e+08 0.00385331 2.35793e+07 5.82343e+07 2.40326e+07 298 2.407e+07 2.14732e+07 0.00397734 2.36331e+07 49.542 0.0067903 0.99221 0 50.476 GTEX-1B8KE-1426-SM-7EWEL 1 B1 2 pieces, reduced spermatogenesis 6.3 Testis Testis 0000473 169 914 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99107 214693 0.933064 0.992821 0.725388 31643 1 76 0.00241925 130 0 6.72401e+07 0.0666326 587380 6.77263e+07 5.7453e+06 31700 3.34902e+07 0 0.207676 0.992821 0.720181 6.72401e+07 0.00337187 1.41526e+07 8.65445e+06 1.42204e+07 134 1.42679e+07 1.10557e+07 0.00289472 1.42054e+07 49.8902 0.00867285 0.994572 0 50.1195 GTEX-1B8KE-1526-SM-7DUG2 1 B1 2 pieces, confirmed target muscularis, focal 'contaminant' mucosa, delineated 7.3 Colon Colon - Sigmoid 0001159 175 908 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993666 369556 0.970825 0.994373 0.847057 22586 1 76 0.00262467 305 0 9.16507e+07 0.0288473 389310 9.21693e+07 8.13906e+06 22601 4.56725e+07 0 0.123768 0.994373 0.84229 9.16507e+07 0.00389143 1.96405e+07 1.2551e+07 1.98415e+07 268 1.98515e+07 1.75759e+07 0.0032576 1.96924e+07 49.7988 0.00422386 0.995079 0 50.2545 GTEX-1B8KE-1626-SM-793CK 1 B1 6 pieces, confirmed target muscularis, single mucus gland, delineated. 7.8 Esophagus Esophagus - Muscularis 0004648 182 901 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99484 291360 0.980181 0.995953 0.866148 20387 1 76 0.00276901 165 0 6.65788e+07 0.0194379 353591 6.68493e+07 9.56627e+06 20396 3.31817e+07 0 0.114033 0.995953 0.862643 6.65788e+07 0.00320537 1.44218e+07 5.71826e+06 1.45104e+07 159 1.45184e+07 1.30357e+07 0.00298695 1.44863e+07 49.9446 0.00528938 0.997066 0 50.153 GTEX-1B8KE-1726-SM-7IGMN 1 B1 6 pieces, well-preserved mucosa, target lymphoid aggregates are ~30% tissue, rep. delineated 6.2 Small Intestine Small Intestine - Terminal Ileum 0001211 184 899 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994067 308178 0.971308 0.995082 0.800875 22828 1 76 0.00232336 157 0 7.05782e+07 0.0283583 673240 7.0927e+07 4.24443e+06 22854 3.51686e+07 0 0.170432 0.995082 0.796937 7.05782e+07 0.00311402 1.55622e+07 8.24845e+06 1.58247e+07 178 1.57529e+07 9.68078e+06 0.00271829 1.56947e+07 49.9075 0.00949201 0.996098 0 50.4181 GTEX-1B8KE-1826-SM-731FD 1 B1 6 pieces, squamous mucosa up to ~0.5mm, 10-15% thickness. Prominent submucosal mucus glands present, rep. delineated 9.3 Esophagus Esophagus - Mucosa 0006920 185 898 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.990806 394051 0.976116 0.993179 0.836927 21654 1 76 0.00303709 146 0 6.58144e+07 0.0234969 214575 6.62664e+07 7.60435e+06 21665 3.2732e+07 0 0.13919 0.993179 0.831218 6.58144e+07 0.00366938 1.47515e+07 8.31151e+06 1.47304e+07 145 1.48267e+07 1.37063e+07 0.00335248 1.48006e+07 49.956 0.00323807 0.995551 0 49.9642 GTEX-1B8KE-1926-SM-731EE 1 B1 6 pieces, well fixed mucosa 0.3-0.4mm thick, ~10% thickness 7.4 Colon Colon - Transverse 0001157 187 896 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991202 263981 0.973111 0.993044 0.819655 22805 1 76 0.00355619 131 0 6.02479e+07 0.0261872 925910 6.06699e+07 7.37731e+06 22825 2.99581e+07 0 0.153456 0.993044 0.813953 6.02479e+07 0.00413494 1.33471e+07 6.67098e+06 1.35376e+07 144 1.35913e+07 9.42074e+06 0.00384503 1.33919e+07 49.6306 0.0152614 0.994886 0 50.3543 GTEX-1B8KE-2026-SM-73KYL 1 B1 6 pieces, confirmed target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 188 895 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99482 166566 0.977405 0.995758 0.841497 21732 1 76 0.00245537 178 0 7.22446e+07 0.0222559 342758 7.25524e+07 6.92772e+06 21749 3.60143e+07 0 0.135909 0.995758 0.837927 7.22446e+07 0.00290498 1.57323e+07 5.46079e+06 1.57713e+07 177 1.57729e+07 1.33885e+07 0.00267997 1.57981e+07 50.0399 0.00472428 0.996696 0 50.0619 GTEX-1B8KE-2126-SM-73KYX 0 B1 6 pieces, squamous epithelium is 30-40microns, minute nubbin adherent dermal fat, delineated 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 197 886 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993463 249868 0.97244 0.994644 0.785878 22549 1 76 0.00259754 205 0 7.22859e+07 0.0272878 411434 7.26751e+07 7.00877e+06 22574 3.60236e+07 0 0.186562 0.994644 0.781669 7.22859e+07 0.00322379 1.58752e+07 8.2907e+06 1.58594e+07 166 1.58908e+07 1.2685e+07 0.00291029 1.59311e+07 50.0633 0.00566128 0.995825 0 49.975 GTEX-1B8KE-2226-SM-7939K 1 B1 2 pieces, trace interstitial fat 8 Muscle Muscle - Skeletal 0011907 207 876 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992778 450253 0.984016 0.993943 0.877344 18066 1 76 0.00196427 127 0 5.61297e+07 0.0157194 420629 5.64717e+07 4.79334e+06 18070 2.79113e+07 0 0.106672 0.993943 0.87203 5.61297e+07 0.00268735 1.18132e+07 4.73743e+06 1.18018e+07 133 1.19298e+07 1.2316e+07 0.00232538 1.17469e+07 49.6139 0.00744849 0.995108 0 49.9759 GTEX-1B8KE-2326-SM-7939L 1 B1 2 pieces, subtotally occlusive atherosis, delineated 6.6 Blood Vessel Artery - Tibial 0007610 201 882 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992717 176568 0.971235 0.993471 0.791444 21928 1 76 0.00228573 128 0 5.94752e+07 0.0284311 171340 5.98661e+07 5.05536e+06 21953 2.95865e+07 0 0.179791 0.993471 0.786276 5.94752e+07 0.00272761 1.29972e+07 4.65872e+06 1.29725e+07 138 1.30333e+07 1.03219e+07 0.0025065 1.29804e+07 49.8984 0.00286205 0.994225 0 49.9524 GTEX-1B8KE-2426-SM-73KYE 1 B1 2 pieces, no adherant fat 5.9 Nerve Nerve - Tibial 0001323 202 881 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991983 277392 0.96783 0.99325 0.758763 23442 1 76 0.00264416 162 0 7.33397e+07 0.0319171 232457 7.38381e+07 7.51304e+06 23474 3.65102e+07 0 0.209068 0.99325 0.753641 7.33397e+07 0.00327128 1.61067e+07 6.07769e+06 1.61312e+07 170 1.61581e+07 1.10512e+07 0.00295732 1.61712e+07 50.0203 0.0031482 0.994516 0 50.038 GTEX-1B8KE-2526-SM-73KYQ 0 B1 2 pieces, trace fascia <5% tissue. 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 211 872 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993324 232918 0.975142 0.994425 0.802984 22062 1 76 0.00256111 173 0 7.6442e+07 0.0245624 419304 7.68705e+07 7.52248e+06 22087 3.80837e+07 0 0.172158 0.994425 0.798507 7.6442e+07 0.00311472 1.68058e+07 7.03733e+06 1.68146e+07 182 1.68419e+07 1.31304e+07 0.00283761 1.68645e+07 50.0336 0.00545468 0.995526 0 50.013 GTEX-1B8KE-5001-SM-AN461 B1 Heart Heart - Left Ventricle 0006566 127 ChIP-Seq GTEX-1B8KE-5016-SM-AN462 B1 Muscle Muscle - Skeletal 0011907 207 ChIP-Seq GTEX-1B8KZ-0003-SM-7J39Z B1 Blood Whole Blood 0013756 -61 BP-53978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/17/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B8KZ-0003-SM-7MD4V B1 Blood Whole Blood 0013756 -61 BP-53978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/17/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B8KZ-0006-SM-7MXTJ B1 8.8 Blood Whole Blood 0013756 -61 BP-53981 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.948269 273703 0.984451 0.958411 0.819628 16821 1 76 0.00291544 70 0 7.63716e+07 0.0140505 123921 7.96857e+07 1.4445e+07 16823 3.768e+07 0 0.164822 0.958411 0.785541 7.63716e+07 0.00435922 1.82237e+07 1.36287e+08 1.82172e+07 119 1.85689e+07 2.25753e+07 0.00362969 1.86985e+07 50.174 0.00155512 0.968554 0 49.991 GTEX-1B8KZ-0008-SM-EXOHR B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 400 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991973 395079 0.983203 0.993833 0.869216 20603 1 76 0.00167788 290 0 1.14834e+08 0.0164955 190328 1.15547e+08 6.2416e+06 20621 5.72004e+07 0 0.113987 0.993833 0.863856 1.14834e+08 0.00282498 2.59059e+07 1.03667e+07 2.6005e+07 305 2.60673e+07 3.01029e+07 0.00225036 2.60422e+07 49.9759 0.00164719 0.995694 0 50.0955 GTEX-1B8KZ-0126-SM-7DHM5 2 B1 2 pieces; moderately autolyzed adrenal cortex; attached 25% and 10% external fat 8.1 Adrenal Gland Adrenal Gland 0002369 300 1228 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991463 147207 0.976852 0.992784 0.80617 22459 1 76 0.0038152 196 0 8.43039e+07 0.0229357 1.73694e+06 8.49167e+07 6.30351e+06 22490 4.19873e+07 0 0.170682 0.992784 0.800353 8.43039e+07 0.0054684 1.85577e+07 1.04161e+07 1.88199e+07 244 1.88242e+07 1.05697e+07 0.0046407 1.86376e+07 49.751 0.0204547 0.994105 0 50.3507 GTEX-1B8KZ-0226-SM-7EWF6 1 B1 2 pieces; congestion, 1 piece includes portion of capsule 6.4 Spleen Spleen 0002106 303 1225 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990717 144866 0.965503 0.992528 0.777785 22740 1 76 0.00319952 113 0 5.59415e+07 0.0325262 398996 5.63627e+07 5.02966e+06 22760 2.77917e+07 0 0.187718 0.992528 0.771973 5.59415e+07 0.00427588 1.23737e+07 8.98888e+06 1.24375e+07 126 1.24556e+07 8.74341e+06 0.00373672 1.24503e+07 49.9894 0.00707908 0.994338 0 50.1286 GTEX-1B8KZ-0326-SM-73KY4 1 B1 6 pieces; up to 7 hair follicles; ~5 - 10%internal/external fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 305 1223 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99395 288175 0.971798 0.994974 0.785999 24474 1 76 0.00260675 220 0 9.19368e+07 0.0279392 379306 9.24012e+07 9.20743e+06 24510 4.58163e+07 0 0.1858 0.994974 0.782048 9.19368e+07 0.00310915 2.0303e+07 9.09928e+06 2.0295e+07 216 2.03275e+07 1.63113e+07 0.00285769 2.0365e+07 50.046 0.00410499 0.995997 0 49.9902 GTEX-1B8KZ-0426-SM-731DP 1 B1 2 pieces; 3 mm in diameter micronodule (outlined); focal interstitial fibrosis; a few lymphoid aggregates (arrowed) 7.5 Thyroid Thyroid 0002046 309 1219 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991402 295652 0.966776 0.992905 0.75588 22911 1 76 0.00339067 113 0 5.50127e+07 0.0328706 146931 5.54058e+07 6.50047e+06 22939 2.73517e+07 0 0.210896 0.992905 0.750517 5.50127e+07 0.00376449 1.21078e+07 5.18139e+06 1.20564e+07 116 1.21573e+07 9.28186e+06 0.0035773 1.20849e+07 49.8507 0.00265191 0.994408 0 49.8936 GTEX-1B8KZ-0526-SM-73KW2 1 B1 2 pieces; anthracotic pigment (arrowed); some emphysematous change; congestion 8.2 Lung Lung 0008952 315 1213 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991629 286421 0.969232 0.992587 0.767498 26260 1 76 0.00440134 213 0 9.92836e+07 0.0301286 327564 1.00025e+08 4.37634e+06 26311 4.94177e+07 0 0.201734 0.992587 0.761808 9.92836e+07 0.00426939 2.18593e+07 8.70132e+06 2.21032e+07 231 2.21236e+07 1.69136e+07 0.00433543 2.19286e+07 49.7787 0.00327482 0.993544 0 50.2775 GTEX-1B8KZ-0626-SM-73KWE 1 B1 6 pieces; well trimmed target muscularis 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 323 1205 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992234 224106 0.974422 0.993286 0.817997 23167 1 76 0.00408978 216 0 9.44961e+07 0.0252304 678834 9.51348e+07 4.33423e+06 23196 4.70583e+07 0 0.156426 0.993286 0.812505 9.44961e+07 0.00402718 2.04055e+07 7.37087e+06 2.06964e+07 232 2.06487e+07 1.7089e+07 0.00405852 2.05485e+07 49.8784 0.0071355 0.994339 0 50.3539 GTEX-1B8KZ-0726-SM-7938W 1 B1 6 pieces; squamous epithelium ~345 to 414 um in thickness; well trimmed 8.9 Esophagus Esophagus - Mucosa 0006920 330 1198 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992877 379711 0.976028 0.993941 0.789794 22047 1 76 0.00223784 136 0 6.0571e+07 0.0236802 255267 6.09403e+07 4.37277e+06 22060 3.01463e+07 0 0.186234 0.993941 0.785009 6.0571e+07 0.00288996 1.37098e+07 7.46533e+06 1.36681e+07 135 1.37757e+07 1.14058e+07 0.00256355 1.36669e+07 49.8017 0.00418881 0.995004 0 49.9239 GTEX-1B8KZ-0826-SM-73KYB 1 B1 6 pieces; well dissected target muscularis; one piece contains ~20% fibrofatty submucosa 8.6 Esophagus Esophagus - Muscularis 0004648 334 1194 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99468 270778 0.977424 0.995693 0.840787 21680 1 76 0.00257207 205 0 8.05504e+07 0.0222443 536320 8.08988e+07 7.71249e+06 21698 4.01558e+07 0 0.136636 0.995693 0.837166 8.05504e+07 0.00296521 1.7305e+07 6.38312e+06 1.7436e+07 204 1.74256e+07 1.49105e+07 0.00276844 1.73927e+07 49.9526 0.00662952 0.996707 0 50.1886 GTEX-1B8KZ-0926-SM-731D7 1 B1 2 pieces; 10% and 30% external/internal fat; mild periductal and interstitial fibrosis; islets present (rep.outlined) 8.1 Pancreas Pancreas 0001150 339 1189 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.992645 265487 0.976615 0.9944 0.828319 20853 1 76 0.00335615 101 0 5.57098e+07 0.0230324 118429 5.60236e+07 6.70519e+06 20865 2.77196e+07 0 0.148296 0.9944 0.82368 5.57098e+07 0.00397795 1.26562e+07 1.14698e+07 1.26834e+07 110 1.2789e+07 1.63717e+07 0.00366651 1.26445e+07 49.7158 0.00211391 0.996154 0 50.0535 GTEX-1B8KZ-1026-SM-73KYN 1 B1 2 fragmented pieces of lobulated mature adipose tissue with septal vessels 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 343 1185 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992761 246249 0.977999 0.993783 0.815562 22516 1 76 0.00263601 150 0 6.82361e+07 0.021701 578612 6.8663e+07 6.59149e+06 22534 3.39792e+07 0 0.162437 0.993783 0.810492 6.82361e+07 0.00316948 1.52101e+07 6.13027e+06 1.52511e+07 168 1.5276e+07 1.10233e+07 0.00290247 1.52535e+07 49.9631 0.00842684 0.994805 0 50.0672 GTEX-1B8KZ-1126-SM-7IGLX 2 B1 6 pieces; autolyzed mucosa and lymphoid aggregates in 4 of 6 samples (arrows) 6.2 Small Intestine Small Intestine - Terminal Ileum 0001211 350 1178 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992583 156434 0.970088 0.993269 0.803268 24185 1 76 0.00299044 136 0 6.7641e+07 0.0275533 516041 6.80994e+07 4.35048e+06 24209 3.36355e+07 0 0.16682 0.993269 0.797862 6.7641e+07 0.00356427 1.48764e+07 7.92217e+06 1.50623e+07 162 1.50326e+07 1.03362e+07 0.00327716 1.49467e+07 49.8566 0.00757777 0.993956 0 50.3105 GTEX-1B8KZ-1226-SM-793CP 1 B1 6 pieces; essentially well preserved mucosa and muscularis 7.5 Stomach Stomach 0000945 355 1173 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.991042 320337 0.977015 0.992532 0.79026 22948 1 76 0.00311896 214 0 7.32622e+07 0.0223822 700481 7.38135e+07 9.92639e+06 22971 3.64682e+07 0 0.186755 0.992532 0.784358 7.32622e+07 0.00382597 1.66285e+07 3.68035e+07 1.67764e+07 173 1.68541e+07 1.4684e+07 0.00347193 1.66577e+07 49.707 0.00948988 0.994022 0 50.2213 GTEX-1B8KZ-1326-SM-7DUG6 2 B1 6 pieces; autolysis within the most superficial mucosa; otherwise preserved mucosa and muscularis 7.4 Colon Colon - Transverse 0001157 361 1167 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991969 258007 0.973006 0.992912 0.801289 24142 1 76 0.00319684 276 0 9.81556e+07 0.0258599 1.15813e+06 9.88564e+07 8.46534e+06 24178 4.88684e+07 0 0.171717 0.992912 0.795609 9.81556e+07 0.00446969 2.18547e+07 1.25507e+07 2.21958e+07 287 2.22258e+07 1.51272e+07 0.00383266 2.19039e+07 49.6353 0.0117152 0.993854 0 50.3872 GTEX-1B8KZ-1526-SM-7DUG7 1 B1 2 pieces; 40% and 25% fibroadipose tissue and dense fibrous stroma with ductal structures suggestive of gynecomastoid stromal and ductal hyperplasia 7.5 Breast Breast - Mammary Tissue 0008367 374 1154 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.989318 243834 0.971027 0.988963 0.740933 24212 1 76 0.00298046 154 0 7.69685e+07 0.0286771 295466 7.78275e+07 8.15037e+06 24252 3.82207e+07 0 0.230094 0.988963 0.732756 7.69685e+07 0.00448127 1.70654e+07 7.1377e+06 1.70343e+07 166 1.71632e+07 1.18732e+07 0.00373114 1.69155e+07 49.6367 0.00379642 0.988609 0 49.9543 GTEX-1B8KZ-1626-SM-73KUU 2 B1 2 pieces; focally moderate (grade 2) autolysis; fibromuscular stroma and glandular structures with numerous corpora amylacea, ~50% of 1 piece is seminal vesicle 6.5 Prostate Prostate 0002367 382 1146 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989724 280408 0.961716 0.991041 0.729574 26137 1 76 0.00442321 163 0 9.25931e+07 0.0380379 783048 9.34301e+07 4.41166e+06 26192 4.60626e+07 0 0.232143 0.991041 0.723038 9.25931e+07 0.00465623 2.01715e+07 1.05372e+07 2.04317e+07 196 2.04452e+07 1.24028e+07 0.00453957 2.028e+07 49.7972 0.00838111 0.992359 0 50.3204 GTEX-1B8KZ-1726-SM-73KV7 1 B1 2 pieces; each is ~20-30% salivary gland, the remainder is fibrofatty stroma, nerve, and skeletal muscle 7.3 Salivary Gland Minor Salivary Gland 0006330 383 1145 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988437 380361 0.970331 0.989353 0.750649 24377 1 76 0.00430675 167 0 8.54837e+07 0.0284263 196613 8.64036e+07 3.74147e+06 24418 4.24544e+07 0 0.219682 0.989353 0.742657 8.54837e+07 0.00453517 1.93046e+07 1.654e+07 1.94591e+07 183 1.95332e+07 1.27952e+07 0.00442085 1.93067e+07 49.7085 0.00227552 0.990269 0 50.1993 GTEX-1B8KZ-1826-SM-73KVJ 1 B1 2 pieces; decreased spermatogenesis, thickening of tubular basement membrane, interstitial fibrosis and focal sclerosis of tubules (arrow) 6 Testis Testis 0000473 385 1143 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989644 264098 0.948146 0.99083 0.690161 31235 1 76 0.00446347 166 0 9.72933e+07 0.0516271 1.63584e+06 9.81938e+07 4.30474e+06 31310 4.84108e+07 0 0.257985 0.99083 0.683832 9.72933e+07 0.00462992 2.10082e+07 1.15825e+07 2.12154e+07 197 2.12633e+07 1.21248e+07 0.00454659 2.10728e+07 49.775 0.0166594 0.992016 0 50.2454 GTEX-1B8KZ-1926-SM-7DUG8 1 B1 2 pieces; mature adipose tissue with ~20and 30% dense fibroconnective tissue, nerve, and vessels 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 389 1139 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992014 256812 0.971603 0.992632 0.779566 24223 1 76 0.0029202 212 0 9.00757e+07 0.0280617 424448 9.07443e+07 7.98478e+06 24258 4.48488e+07 0 0.192037 0.992632 0.773822 9.00757e+07 0.00420447 1.97586e+07 1.07282e+07 1.9892e+07 220 1.99196e+07 1.45142e+07 0.00356193 1.97889e+07 49.8355 0.0046774 0.99325 0 50.1682 GTEX-1B8KZ-2026-SM-7DHMB 1 B1 6 pieces; ~34um thick epidermis; insignificant amount of internal/external fat except one piece containing ~10% of external fat (outlined) 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 398 1130 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988916 166794 0.971288 0.989968 0.771732 23617 1 76 0.00368213 142 0 6.25074e+07 0.0284529 298447 6.31408e+07 5.1092e+06 23641 3.10731e+07 0 0.199556 0.989968 0.76399 6.25074e+07 0.00567023 1.37419e+07 5.936e+06 1.38125e+07 136 1.38542e+07 1.03061e+07 0.00467512 1.37633e+07 49.8354 0.00472669 0.991019 0 50.1282 GTEX-1B8KZ-2126-SM-73KYG 1 B1 2 pieces; ~10% internal fat, scattered atrophic fibers and interspersed degenerating myocytes (?rhabdomyolysis) 8.2 Muscle Muscle - Skeletal 0011907 405 1123 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994477 258886 0.979629 0.995567 0.831777 21511 1 76 0.0025196 161 0 8.20575e+07 0.0201422 635582 8.24229e+07 7.84151e+06 21534 4.09027e+07 0 0.147852 0.995567 0.828091 8.20575e+07 0.00304551 1.77548e+07 7.31738e+06 1.78837e+07 192 1.78693e+07 1.54978e+07 0.00278227 1.78469e+07 49.9687 0.00771123 0.996658 0 50.1808 GTEX-1B8KZ-2226-SM-73KYS 1 B1 2 pieces; no plaque formation, small focus of medial calcification 7.4 Blood Vessel Artery - Tibial 0007610 408 1120 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991536 246097 0.97457 0.992841 0.797933 21619 1 76 0.00271008 147 0 7.176e+07 0.0250532 263647 7.22774e+07 7.41428e+06 21645 3.57025e+07 0 0.176637 0.992841 0.79222 7.176e+07 0.00336933 1.55716e+07 5.47325e+06 1.55578e+07 162 1.55829e+07 1.27906e+07 0.00303927 1.56375e+07 50.0874 0.00364771 0.994145 0 49.9779 GTEX-1B8KZ-2326-SM-7DUG9 1 B1 2 pieces; ~5-10% external/internal fat 7.3 Nerve Nerve - Tibial 0001323 408 1120 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.98794 360967 0.96304 0.987985 0.679397 25566 1 76 0.0032009 180 0 9.07409e+07 0.0366996 235572 9.18444e+07 1.00939e+07 25624 4.5041e+07 0 0.283643 0.987985 0.671234 9.07409e+07 0.0047401 2.00008e+07 8.89772e+06 1.99184e+07 187 2.00706e+07 1.1926e+07 0.00397047 1.98581e+07 49.734 0.0025649 0.988031 0 49.8968 GTEX-1B8L1-0004-SM-7J3AV B1 Blood Whole Blood 0013756 699 BP-53978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/17/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B8L1-0004-SM-7MA5X B1 Blood Whole Blood 0013756 699 BP-53978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/17/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B8L1-0005-SM-9MQK6 B1 8.8 Blood Whole Blood 0013756 699 BP-53981 RNA isolation_PAXgene Blood RNA (Manual) 06/17/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.961797 412429 0.971907 0.964113 0.756424 19010 1 76 0.0056608 99 0 6.35124e+07 0.0270549 197117 6.58765e+07 8.23175e+06 19020 3.15316e+07 0 0.215483 0.964113 0.729278 6.35124e+07 0.00792078 1.45259e+07 9.44162e+07 1.48049e+07 116 1.48573e+07 1.46681e+07 0.00678808 1.46359e+07 49.6246 0.00299222 0.966428 0 50.4756 GTEX-1B8L1-0008-SM-EXOHQ B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 856 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975,LCSET-11230 06/05/2017 TruSeq.v1 RNASEQ 0.990676 1.20438e+06 0.973069 0.993001 0.847702 23411 1 76 0.00356388 412 0 2.11336e+08 0.0265889 689299 2.12825e+08 1.05237e+07 23451 1.05191e+08 0 0.125368 0.993001 0.841768 2.11336e+08 0.0021059 4.69674e+07 4.1684e+07 4.73904e+07 369 4.75854e+07 5.55439e+07 0.0028366 4.72316e+07 49.8135 0.0032388 0.995325 0 50.2242 GTEX-1B8L1-0011-R10b-SM-7P8Q4 B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 710 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991804 557302 0.966198 0.993594 0.868332 23833 1 76 0.00317009 271 0 1.12723e+08 0.0334354 4.1058e+06 1.1345e+08 1.44429e+07 23850 5.6126e+07 0 0.0978659 0.993594 0.86277 1.12723e+08 0.00402796 2.44709e+07 1.7323e+07 2.49469e+07 321 2.49337e+07 1.27468e+07 0.00359825 2.46505e+07 49.7144 0.0361904 0.995384 0 50.4816 GTEX-1B8L1-0011-R11b-SM-793DJ B1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 710 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993442 568852 0.952254 0.994489 0.760279 24011 1 76 0.00317953 272 0 9.81917e+07 0.047231 1.13173e+06 9.87359e+07 1.49081e+07 24044 4.88954e+07 0 0.191976 0.994489 0.756089 9.81917e+07 0.00342061 2.13292e+07 1.25131e+07 2.13422e+07 261 2.14672e+07 1.42068e+07 0.00329994 2.12988e+07 49.8032 0.0114622 0.995536 0 50.0152 GTEX-1B8L1-0011-R1a-SM-7P8SS B1, A1 6.6 Brain Brain - Hippocampus 0001954 710 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.932319 477584 0.963282 0.963574 0.84269 24254 1 76 0.00452775 156 0 7.70317e+07 0.0363559 4.83504e+06 7.99437e+07 1.26265e+07 24272 3.71352e+07 0 0.120592 0.963574 0.811994 7.70317e+07 0.00867587 1.65297e+07 1.69311e+07 1.63216e+07 199 1.75852e+07 8.99653e+06 0.00653453 1.75403e+07 49.9361 0.0604805 0.994829 0 49.6832 GTEX-1B8L1-0011-R2a-SM-9OSVL B1, A1 5.8 Brain Brain - Substantia nigra 0002038 710 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991844 276068 0.968632 0.994167 0.864964 22945 1 76 0.00258919 268 0 7.98337e+07 0.0310683 5.32204e+06 8.03021e+07 7.60291e+06 22958 3.9735e+07 0 0.103668 0.994167 0.859919 7.98337e+07 0.00381933 1.76269e+07 1.20543e+07 1.78456e+07 299 1.78248e+07 9.054e+06 0.00320282 1.7808e+07 49.9764 0.0662752 0.996491 0 50.3084 GTEX-1B8L1-0011-R3a-SM-7EPIO B1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 710 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991996 456323 0.962947 0.994296 0.854327 23634 1 76 0.00307461 152 0 9.00221e+07 0.0364942 3.97424e+06 9.05385e+07 1.20701e+07 23650 4.48454e+07 0 0.10862 0.994296 0.849454 9.00221e+07 0.0114351 1.96142e+07 2.26791e+07 1.99004e+07 181 1.99369e+07 1.19165e+07 0.00724517 1.97599e+07 49.7771 0.0438956 0.996595 0 50.3621 GTEX-1B8L1-0011-R4a-SM-7EWFJ B1, A1 6.3 Brain Brain - Amygdala 0001876 710 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.9928 253341 0.962985 0.994746 0.858408 21697 1 76 0.00235807 128 0 5.18798e+07 0.0367338 2.96201e+06 5.21538e+07 4.59576e+06 21708 2.58346e+07 0 0.104578 0.994746 0.853898 5.18798e+07 0.00345994 1.13299e+07 1.0525e+07 1.15186e+07 148 1.14983e+07 6.27024e+06 0.00290792 1.1442e+07 49.8772 0.0567938 0.996692 0 50.4131 GTEX-1B8L1-0011-R5a-SM-7DHN5 B1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 710 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988456 283396 0.957559 0.987632 0.825908 23201 1 76 0.00366018 153 0 6.48858e+07 0.0421012 3.19665e+06 6.56983e+07 6.33673e+06 23216 3.21909e+07 0 0.131651 0.987632 0.815693 6.48858e+07 0.00536328 1.4167e+07 1.24431e+07 1.42927e+07 183 1.43246e+07 6.7688e+06 0.00451244 1.40853e+07 49.5788 0.0486565 0.986808 0 50.2209 GTEX-1B8L1-0011-R6b-SM-7P8SU B1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 710 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.947392 573707 0.958332 0.971448 0.84405 24489 1 76 0.00444348 268 0 8.59655e+07 0.0412858 4.13758e+06 8.84921e+07 1.28419e+07 24508 4.17856e+07 0 0.114282 0.971448 0.819951 8.59655e+07 0.00775622 1.84209e+07 1.97782e+07 1.81925e+07 261 1.92455e+07 1.01028e+07 0.00605883 1.92919e+07 50.0601 0.0467565 0.995505 0 49.6881 GTEX-1B8L1-0011-R7b-SM-9OSVK B1, A1 6.9 Brain Brain - Putamen (basal ganglia) 0001874 710 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992567 576356 0.962913 0.994791 0.844082 24487 1 76 0.00251761 272 0 1.23792e+08 0.0368145 8.46461e+06 1.2444e+08 1.17414e+07 24504 6.16426e+07 0 0.118831 0.994791 0.839685 1.23792e+08 0.00338227 2.68541e+07 3.62319e+07 2.72031e+07 318 2.7164e+07 1.23041e+07 0.00294897 2.71327e+07 49.9713 0.0680216 0.997014 0 50.3228 GTEX-1B8L1-0011-R8b-SM-7P8ST B1, A1 6.7 Brain Brain - Hypothalamus 0001898 710 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.941741 514096 0.962652 0.96828 0.855976 24976 1 76 0.00431285 272 0 8.99769e+07 0.036959 2.98093e+06 9.29245e+07 1.40588e+07 24992 4.36252e+07 0 0.106675 0.96828 0.828824 8.99769e+07 0.00860685 1.94113e+07 1.69591e+07 1.91586e+07 262 2.03549e+07 1.18548e+07 0.006401 2.04886e+07 50.1636 0.032079 0.994818 0 49.6724 GTEX-1B8L1-0011-R9b-SM-9WG5U B1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 710 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992774 438870 0.965938 0.99469 0.837885 24826 1 76 0.00249717 391 0 1.29313e+08 0.0336865 5.17039e+06 1.30003e+08 8.98763e+06 24854 6.44008e+07 0 0.128054 0.99469 0.833436 1.29313e+08 0.00347409 2.87588e+07 1.62226e+07 2.92029e+07 359 2.90326e+07 1.77855e+07 0.00298469 2.91584e+07 50.1081 0.0397714 0.996607 0 50.3831 GTEX-1B8L1-0126-SM-9KNVS 1 B1 2 pieces, minimal fascia 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 723 1035 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992148 255195 0.97124 0.99343 0.766201 25208 1 76 0.00266919 281 0 1.05512e+08 0.0284541 527679 1.0621e+08 1.22035e+07 25258 5.25756e+07 0 0.205039 0.99343 0.761166 1.05512e+08 0.00371975 2.32679e+07 1.14803e+07 2.3478e+07 282 2.34884e+07 1.64039e+07 0.00319379 2.33846e+07 49.8893 0.00496827 0.994711 0 50.2247 GTEX-1B8L1-0226-SM-7PBYE 1 B1 6 pieces, minimal atherosis 7.1 Blood Vessel Artery - Aorta 0001496 725 1033 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987256 175600 0.973878 0.991212 0.806349 23363 1 76 0.00290796 380 0 1.24669e+08 0.0256001 473001 1.25774e+08 1.71665e+07 23396 6.19137e+07 0 0.167529 0.991212 0.799263 1.24669e+08 0.00458085 2.68155e+07 1.08376e+07 2.7051e+07 331 2.72004e+07 2.27715e+07 0.00374107 2.71265e+07 49.932 0.00376072 0.995169 0 50.2186 GTEX-1B8L1-0426-SM-7SB76 1 B1 2 pieces, no abnormalities 7.7 Heart Heart - Atrial Appendage 0006631 731 1027 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989859 185814 0.971886 0.992774 0.74451 23021 1 76 0.00277581 142 0 7.42353e+07 0.0277148 2.49766e+06 7.47756e+07 8.2181e+06 23053 3.6902e+07 0 0.227376 0.992774 0.73913 7.42353e+07 0.00433389 1.61238e+07 8.92813e+06 1.63251e+07 168 1.63771e+07 9.64148e+06 0.00355256 1.62703e+07 49.8364 0.033402 0.995688 0 50.3102 GTEX-1B8L1-0526-SM-79ONX 1 B1 2 pieces, ~30% interstitial fat/fatty infiltration 6.6 Heart Heart - Left Ventricle 0006566 737 1021 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.993165 173540 0.981492 0.993692 0.838122 21834 1 76 0.0030672 367 0 8.92308e+07 0.0184026 6.47133e+06 8.97973e+07 6.59478e+06 21850 4.4454e+07 0 0.14337 0.993692 0.832835 8.92308e+07 0.0041277 1.98291e+07 1.52047e+07 2.01731e+07 348 2.01527e+07 6.98482e+06 0.00359717 1.98782e+07 49.6571 0.072066 0.994218 0 50.43 GTEX-1B8L1-0626-SM-7EPHL 1 B1 2 pieces, marked congestion 6.9 Lung Lung 0008952 738 1020 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.988664 216719 0.971938 0.990725 0.73112 23662 1 76 0.00349498 122 0 8.17039e+07 0.0274912 254303 8.24688e+07 1.12678e+07 23699 4.06257e+07 0 0.240817 0.990725 0.724339 8.17039e+07 0.0119595 1.80218e+07 7.88179e+06 1.81014e+07 139 1.81756e+07 1.24237e+07 0.00771843 1.81063e+07 49.9045 0.00308363 0.992787 0 50.1101 GTEX-1B8L1-0726-SM-7P8RT 1 B1 2 pieces, prominent chronic passive congestion; 5x2mm hilar vessel/connective tissue, delineated 6.7 Liver Liver 0001114 739 1019 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.920871 391804 0.971808 0.957456 0.806733 22605 1 76 0.00486546 122 0 7.41229e+07 0.0280082 1.07646e+06 7.74165e+07 1.30222e+07 22626 3.55129e+07 0 0.165075 0.957456 0.772412 7.41229e+07 0.00950558 1.56539e+07 1.2166e+07 1.54758e+07 150 1.68844e+07 1.13625e+07 0.00709687 1.67886e+07 49.8578 0.0139048 0.994041 0 49.7139 GTEX-1B8L1-1026-SM-79ONW 1 B1 6 pieces, confirmed target muscularis 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 746 1012 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991297 94784 0.967547 0.990584 0.76528 22995 1 76 0.00327076 126 0 6.30051e+07 0.032223 1.0179e+06 6.3604e+07 4.37645e+06 23021 3.13329e+07 0 0.202267 0.990584 0.758074 6.30051e+07 0.00452815 1.37709e+07 5.33714e+06 1.3859e+07 146 1.38404e+07 8.43368e+06 0.0038999 1.37473e+07 49.8312 0.0160038 0.989872 0 50.1593 GTEX-1B8L1-1126-SM-7RHIC 1 B1 6 pieces, confirmed target muscularis 6.8 Esophagus Esophagus - Muscularis 0004648 750 1008 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760,LCSET-7212 05/09/2015 TruSeq.v1 RNASEQ 0.994082 179305 0.969909 0.994892 0.782404 24680 1 76 0.00234439 274 0 1.23479e+08 0.0298401 1.67767e+06 1.24113e+08 7.68369e+06 24727 6.1542e+07 0 0.187505 0.994892 0.778408 1.23479e+08 0.00294521 2.65038e+07 1.0279e+07 2.67103e+07 316 2.6674e+07 1.84091e+07 0.00264455 2.66371e+07 49.9654 0.0135173 0.995701 0 50.194 GTEX-1B8L1-1326-SM-7MKG6 3 B1 2 pieces, cortex, advanced autolysis, ~40% adherent fat 5.8 Adrenal Gland Adrenal Gland 0002369 753 1005 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981159 238993 0.969052 0.988123 0.811212 23129 1 76 0.00413217 132 0 6.72404e+07 0.0307228 3.27845e+06 6.80487e+07 1.01293e+07 23154 3.3271e+07 0 0.15784 0.988123 0.801577 6.72404e+07 0.00553933 1.44926e+07 8.72038e+06 1.47298e+07 160 1.49196e+07 8.66291e+06 0.00483079 1.47322e+07 49.6841 0.0481781 0.995086 0 50.4059 GTEX-1B8L1-1526-SM-79OLK 3 B1 6 pieces, target mucuosa completely sloughed/autolyzed 7 Stomach Stomach 0000945 758 1000 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977793 202225 0.976221 0.981637 0.822777 22334 1 76 0.00515302 129 0 6.24452e+07 0.0234536 510764 6.36133e+07 1.47798e+07 22353 3.10654e+07 0 0.153444 0.981637 0.807669 6.24452e+07 0.00637389 1.35564e+07 6.48283e+06 1.36868e+07 137 1.37566e+07 1.08595e+07 0.00576106 1.37098e+07 49.9148 0.0080292 0.985482 0 50.2394 GTEX-1B8L1-1626-SM-7IGMH 2 B1 2 pieces, no abnormalities 6.1 Thyroid Thyroid 0002046 763 995 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993558 218644 0.967128 0.994534 0.737353 23875 1 76 0.00219422 136 0 7.06367e+07 0.0325505 458562 7.1025e+07 4.48668e+06 23910 3.5197e+07 0 0.229776 0.994534 0.733322 7.06367e+07 0.00310632 1.54645e+07 7.23290e+06 1.55999e+07 155 1.55997e+07 1.04641e+07 0.00264982 1.55319e+07 49.891 0.00645635 0.995509 0 50.2181 GTEX-1B8L1-1926-SM-7IGND 1 B1 6 pieces, confirmed target muscularis 6 Colon Colon - Sigmoid 0001159 771 987 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99338 264090 0.970987 0.994243 0.842733 23437 1 76 0.00202503 205 0 8.21536e+07 0.0287673 1.10714e+06 8.26294e+07 4.60289e+06 23455 4.09406e+07 0 0.128254 0.994243 0.837881 8.21536e+07 0.00298851 1.75806e+07 7.0763e+06 1.77686e+07 238 1.77101e+07 1.32848e+07 0.00250635 1.77121e+07 50.0028 0.0133989 0.995105 0 50.2659 GTEX-1B8L1-2226-SM-7P8PT 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40-50 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 784 974 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990396 327902 0.96982 0.993088 0.776546 25121 1 76 0.00288943 293 0 1.05071e+08 0.0299268 533563 1.05802e+08 1.45345e+07 25164 5.22718e+07 0 0.193274 0.993088 0.771179 1.05071e+08 0.00450567 2.28135e+07 1.20045e+07 2.30079e+07 302 2.31074e+07 1.71553e+07 0.00369536 2.29761e+07 49.8575 0.00504303 0.99578 0 50.2121 GTEX-1B8L1-2326-SM-9JGGA 2 B1 2 pieces, spermatogenesis appears reduced 7 Testis Testis 0000473 785 973 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.99233 246506 0.929601 0.993375 0.719098 34688 1 76 0.00213019 283 0 1.14745e+08 0.0700673 1.42956e+06 1.1551e+08 5.7543e+06 34772 5.72121e+07 0 0.210503 0.993375 0.714334 1.14745e+08 0.00283906 2.39136e+07 1.51793e+07 2.40225e+07 273 2.40521e+07 1.78073e+07 0.00248425 2.39873e+07 49.9326 0.012376 0.99442 0 50.1136 GTEX-1B8L1-2426-SM-9WYTE 1 B1 2 pieces, fibroadipose elements only 6.9 Breast Breast - Mammary Tissue 0008367 789 969 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992513 205218 0.97092 0.994062 0.766399 25170 1 76 0.00246227 210 0 9.3622e+07 0.0287574 752736 9.41812e+07 6.25761e+06 25215 4.66328e+07 0 0.204521 0.994062 0.761848 9.3622e+07 0.00456476 2.05817e+07 8.41686e+06 2.07874e+07 253 2.0802e+07 1.38799e+07 0.00351188 2.06994e+07 49.8764 0.00799242 0.995612 0 50.2486 GTEX-1B8L1-2526-SM-9WYTF 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40-50 microns 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 858 900 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993924 207484 0.976618 0.995224 0.838385 23752 1 76 0.00242375 316 0 9.10491e+07 0.0230386 587278 9.1486e+07 6.50887e+06 23774 4.53765e+07 0 0.138232 0.995224 0.834381 9.10491e+07 0.00422904 1.97357e+07 9.76962e+06 1.99101e+07 265 1.99229e+07 1.71316e+07 0.00332522 1.98323e+07 49.8861 0.00641932 0.996523 0 50.22 GTEX-1B8L1-2626-SM-7SB77 0 B1 2 pieces, ~20% fascia/ vascular elements; rep delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 859 899 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988655 414923 0.962575 0.991946 0.709456 26041 1 76 0.0027457 284 0 1.09449e+08 0.037105 738363 1.10338e+08 1.27648e+07 26092 5.43865e+07 0 0.25312 0.991946 0.703741 1.09449e+08 0.00438476 2.36607e+07 1.33061e+07 2.39231e+07 264 2.40274e+07 1.61141e+07 0.00356251 2.38976e+07 49.8646 0.00669182 0.995236 0 50.2757 GTEX-1B8L1-2726-SM-793AL 0 B1 2 pieces, ~10% interstitial fat; rep delineated 8.5 Muscle Muscle - Skeletal 0011907 860 898 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993766 393506 0.983149 0.99491 0.882119 18534 1 76 0.00202805 124 0 5.98773e+07 0.0166433 950752 6.01836e+07 4.59576e+06 18541 2.97952e+07 0 0.10103 0.99491 0.877629 5.98773e+07 0.00271223 1.30976e+07 5.75175e+06 1.31499e+07 148 1.32023e+07 1.21385e+07 0.00236975 1.3108e+07 49.8208 0.0157975 0.996053 0 50.0995 GTEX-1B8L1-2826-SM-793D2 0 B1 2 pieces, focally calcified atherosis, delineated; nubbin of adherent fat/fibrous tissue up to ~0.7mm 7.7 Blood Vessel Artery - Tibial 0007610 860 898 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993723 320099 0.977721 0.994932 0.860968 20917 1 76 0.00283478 144 0 6.55236e+07 0.0218494 337859 6.58574e+07 9.21682e+06 20926 3.26354e+07 0 0.116753 0.994932 0.856604 6.55236e+07 0.00347985 1.40507e+07 4.91223e+06 1.40875e+07 150 1.40939e+07 1.38936e+07 0.00315692 1.41197e+07 50.0457 0.00513016 0.996141 0 50.0653 GTEX-1B8L1-2926-SM-7DUGA 0 B1 2 pieces, no adherent fat 7.4 Nerve Nerve - Tibial 0001323 861 897 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991213 326077 0.965717 0.991389 0.745054 24932 1 76 0.00293614 184 0 8.54401e+07 0.0339171 236784 8.61822e+07 8.2168e+06 24980 4.24901e+07 0 0.220663 0.991389 0.738638 8.54401e+07 0.00415739 1.88374e+07 8.42564e+06 1.88481e+07 188 1.89415e+07 1.36088e+07 0.00354666 1.8764e+07 49.7646 0.00274748 0.991564 0 50.0142 GTEX-1B8L1-3026-SM-7EPHK 1 B1 2 pieces, no abnormalities 6.9 Brain Brain - Cortex 0001870 984 774 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991232 405417 0.966859 0.993766 0.857634 22967 1 76 0.00309854 127 0 7.89402e+07 0.0326324 3.06834e+06 7.94354e+07 1.07006e+07 22980 3.92967e+07 0 0.109225 0.993766 0.852288 7.89402e+07 0.0116521 1.72599e+07 1.60529e+07 1.75947e+07 163 1.76143e+07 1.06498e+07 0.00736442 1.74135e+07 49.7133 0.0386269 0.9963 0 50.4802 GTEX-1B8L1-3126-SM-7EPHA 1 B1 1 piece, no abnormalities, adenohypophysis 6.8 Pituitary Pituitary 0000007 985 773 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99012 359603 0.95942 0.992655 0.756684 25728 1 76 0.00320188 119 0 8.31021e+07 0.0402436 811395 8.3717e+07 1.1021e+07 25772 4.13675e+07 0 0.202736 0.992655 0.751126 8.31021e+07 0.0119019 1.79514e+07 1.12027e+07 1.81413e+07 145 1.81982e+07 1.13138e+07 0.00754079 1.80906e+07 49.8517 0.00969212 0.995191 0 50.2631 GTEX-1B8L1-3226-SM-7P8OX 1 B1 2 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 989 769 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987781 403170 0.947283 0.98996 0.735963 24471 1 76 0.00335762 200 0 1.00402e+08 0.052358 1.8338e+06 1.0142e+08 1.48487e+07 24520 4.99513e+07 0 0.21132 0.98996 0.728574 1.00402e+08 0.00397867 2.15872e+07 1.96357e+07 2.19356e+07 252 2.20592e+07 1.21007e+07 0.00366746 2.16616e+07 49.5452 0.0180812 0.992138 0 50.4003 GTEX-1B8SF-0003-SM-7J38X B1 Blood Whole Blood 0013756 999 BP-54043 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B8SF-0003-SM-7MA6B B1 Blood Whole Blood 0013756 999 BP-54043 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B8SF-0005-SM-7MGVK B1 7.2 Blood Whole Blood 0013756 999 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.975736 247814 0.977547 0.977917 0.802414 16883 1 76 0.00254662 90 0 5.64987e+07 0.0217886 216288 5.77745e+07 4.38868e+06 16886 2.81304e+07 0 0.175133 0.977917 0.784695 5.64987e+07 0.00401445 1.32386e+07 8.83131e+07 1.32936e+07 107 1.3305e+07 1.46512e+07 0.0032789 1.33603e+07 50.1036 0.00374366 0.980099 0 50.1036 GTEX-1B8SF-0008-SM-EXOHU B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1059 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991611 537187 0.983567 0.99345 0.867332 20687 1 76 0.00167011 290 0 1.08546e+08 0.016131 180380 1.09262e+08 5.49582e+06 20705 5.40475e+07 0 0.116235 0.99345 0.86165 1.08546e+08 0.00271816 2.4478e+07 9.02557e+06 2.46188e+07 289 2.46928e+07 2.82772e+07 0.00219316 2.45928e+07 49.8986 0.00165089 0.995289 0 50.1433 GTEX-1B8SF-0011-R10b-SM-7P8SW B1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 994 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.946482 530576 0.96185 0.970575 0.844433 23945 1 76 0.0047783 268 0 8.79474e+07 0.0378693 4.64082e+06 9.06137e+07 1.55934e+07 23961 4.27424e+07 0 0.117417 0.970575 0.819586 8.79474e+07 0.00752998 1.88082e+07 2.12678e+07 1.86045e+07 262 1.96479e+07 8.65861e+06 0.00611999 1.96958e+07 50.0609 0.0512155 0.994668 0 49.7278 GTEX-1B8SF-0011-R11a-SM-79OOP B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 994 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992541 306450 0.948134 0.992932 0.746098 22213 1 76 0.00327738 107 0 5.95617e+07 0.0513493 891057 5.99857e+07 3.412e+06 22238 2.96563e+07 0 0.202036 0.992932 0.740824 5.95617e+07 0.00444693 1.29144e+07 8.03838e+06 1.29365e+07 133 1.29762e+07 7.74908e+06 0.00386192 1.28944e+07 49.8418 0.0148545 0.993324 0 50.0426 GTEX-1B8SF-0011-R1b-SM-7P8Q8 B1, A1 6.7 Brain Brain - Hippocampus 0001954 994 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991422 576524 0.960467 0.99348 0.839695 24087 1 76 0.00310606 274 0 1.09479e+08 0.0392953 7.63489e+06 1.10197e+08 1.55237e+07 24113 5.45035e+07 0 0.120773 0.99348 0.83422 1.09479e+08 0.00390471 2.35396e+07 2.85755e+07 2.44594e+07 313 2.43494e+07 9.42246e+06 0.00350456 2.38431e+07 49.4747 0.0692838 0.995538 0 50.9581 GTEX-1B8SF-0011-R5a-SM-79OOO B1, A1 6.5 Brain Brain - Caudate (basal ganglia) 0001873 994 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994267 371608 0.96194 0.994402 0.840974 22061 1 76 0.00290628 149 0 6.20124e+07 0.0378122 4.78021e+06 6.23615e+07 3.53029e+06 22074 3.08949e+07 0 0.120966 0.994402 0.836266 6.20124e+07 0.00409602 1.34667e+07 1.75499e+07 1.38184e+07 193 1.37124e+07 5.17322e+06 0.00350107 1.35725e+07 49.7436 0.0766533 0.994536 0 50.6445 GTEX-1B8SF-0011-R6b-SM-7MXUD B1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 994 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.985503 319563 0.962592 0.990656 0.821579 24310 1 76 0.00262611 270 0 9.67132e+07 0.0370803 6.05742e+06 9.76253e+07 1.07008e+07 24330 4.8023e+07 0 0.141013 0.990656 0.813902 9.67132e+07 0.00357762 2.09243e+07 2.70832e+07 2.09111e+07 289 2.10623e+07 1.07366e+07 0.00309939 2.12241e+07 50.1913 0.0620477 0.995809 0 49.9842 GTEX-1B8SF-0011-R7b-SM-9OSVM B1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 994 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991665 569279 0.96279 0.993975 0.828406 23369 1 76 0.00240187 270 0 1.08381e+08 0.0370467 1.00739e+07 1.09038e+08 1.01608e+07 23386 5.39746e+07 0 0.134384 0.993975 0.823415 1.08381e+08 0.00357921 2.32938e+07 4.76799e+07 2.3792e+07 319 2.35863e+07 7.82872e+06 0.00298917 2.36975e+07 50.1175 0.0923883 0.996285 0 50.529 GTEX-1B8SF-0011-R8b-SM-7P8SX B1, A1 5.6 Brain Brain - Hypothalamus 0001898 994 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.921343 513591 0.957163 0.957825 0.832584 23978 1 76 0.00457089 267 0 8.50848e+07 0.0426364 7.62805e+06 8.88314e+07 1.45359e+07 23995 4.07733e+07 0 0.124579 0.957825 0.79747 8.50848e+07 0.010053 1.82321e+07 2.06286e+07 1.77315e+07 258 1.91046e+07 6.85467e+06 0.00720755 1.9752e+07 50.833 0.0858711 0.994306 0 49.304 GTEX-1B8SF-0126-SM-7DUG3 0 B1 6 pieces; well trimmed with insignificant periadnexal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1021 1280 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.99259 248414 0.971288 0.993321 0.792393 23220 1 76 0.00279991 167 0 6.96259e+07 0.0284643 221207 7.00941e+07 6.14668e+06 23239 3.46805e+07 0 0.178896 0.993321 0.7871 6.96259e+07 0.00410214 1.52261e+07 8.53284e+06 1.53275e+07 154 1.53762e+07 1.2588e+07 0.00345055 1.52267e+07 49.7558 0.00315586 0.994052 0 50.1659 GTEX-1B8SF-0326-SM-7EWEN 0 B1 2 pieces; ~40 to 50% attached fat 6.3 Nerve Nerve - Tibial 0001323 1038 1263 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990283 84448 0.9655 0.992074 0.724762 23344 1 76 0.00246265 129 0 5.47503e+07 0.0341633 183672 5.51877e+07 4.64228e+06 23374 2.72549e+07 0 0.240738 0.992074 0.719018 5.47503e+07 0.00342374 1.20134e+07 5.05642e+06 1.20801e+07 118 1.21039e+07 8.42565e+06 0.00294233 1.20793e+07 49.9491 0.00332813 0.993865 0 50.1385 GTEX-1B8SF-0426-SM-79OL4 1 B1 2 pieces; ~5% internal fat 7.1 Muscle Muscle - Skeletal 0011907 1045 1256 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973894 322758 0.981076 0.97791 0.850732 21828 1 76 0.0050585 201 0 1.00324e+08 0.0187044 1.22082e+06 1.0259e+08 2.5238e+07 21849 4.99237e+07 0 0.130344 0.97791 0.83194 1.00324e+08 0.0063545 2.15807e+07 1.11939e+07 2.18123e+07 250 2.19968e+07 2.04625e+07 0.00570384 2.17663e+07 49.7367 0.0119 0.981927 0 50.2668 GTEX-1B8SF-0526-SM-7939F 1 B1 2 pieces; mature adipose tissue with large vessel at one edge 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 1044 1257 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994167 183950 0.970522 0.994651 0.760644 22930 1 76 0.00194995 144 0 6.63383e+07 0.0291476 251756 6.66951e+07 3.20546e+06 22963 3.30539e+07 0 0.209877 0.994651 0.756575 6.63383e+07 0.00225934 1.46146e+07 6.42162e+06 1.4586e+07 148 1.46403e+07 1.12939e+07 0.00210457 1.45892e+07 49.9125 0.00377473 0.995135 0 49.951 GTEX-1B8SF-0626-SM-73KVV 2 B1 2 pieces; minimal attached fat/fibrous tissue 7.4 Thyroid Thyroid 0002046 1051 1250 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.987824 290037 0.971931 0.989143 0.755118 25064 1 76 0.00420187 174 0 9.46958e+07 0.0277451 355041 9.57352e+07 4.6245e+06 25109 4.70659e+07 0 0.216812 0.989143 0.74692 9.46958e+07 0.00459473 2.06928e+07 7.88377e+06 2.07772e+07 199 2.08306e+07 1.52567e+07 0.00439804 2.07642e+07 49.9202 0.00370857 0.990461 0 50.1017 GTEX-1B8SF-0726-SM-73KYZ 1 B1 2 pieces; well trimmed 7.9 Blood Vessel Artery - Tibial 0007610 1058 1243 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993772 232149 0.973929 0.994883 0.816434 21497 1 76 0.00248907 158 0 7.29201e+07 0.025656 331757 7.32951e+07 7.21418e+06 21521 3.63318e+07 0 0.157495 0.994883 0.812257 7.29201e+07 0.00302983 1.56446e+07 5.36077e+06 1.56883e+07 165 1.56967e+07 1.39041e+07 0.00275915 1.57138e+07 50.0273 0.00452632 0.995995 0 50.0697 GTEX-1B8SF-0826-SM-73KW8 1 B1 2 pieces; severe congestion and fresh hemorrhage; few larger vessels 6.3 Lung Lung 0008952 1063 1238 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.98803 217230 0.969819 0.989271 0.70393 24091 1 76 0.00435126 154 0 8.68579e+07 0.0298763 452379 8.78e+07 4.2546e+06 24134 4.31619e+07 0 0.265889 0.989271 0.696378 8.68579e+07 0.00465418 1.91886e+07 8.20068e+06 1.92184e+07 172 1.92694e+07 1.16584e+07 0.00450253 1.92422e+07 49.9647 0.00515238 0.990512 0 50.0388 GTEX-1B8SF-1326-SM-7IGQJ 1 B1 2 pieces; fibromuscular tissue with ~20% internal fat 5.8 Heart Heart - Atrial Appendage 0006631 1077 1224 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99439 220587 0.978975 0.994747 0.811602 22352 1 76 0.00186031 191 0 7.57631e+07 0.020756 2.30648e+06 7.61632e+07 2.4872e+06 22378 3.77737e+07 0 0.167373 0.994747 0.807339 7.57631e+07 0.00235847 1.66214e+07 8.65053e+06 1.69144e+07 209 1.68824e+07 1.07194e+07 0.0021093 1.66791e+07 49.6972 0.0302834 0.995104 0 50.4368 GTEX-1B8SF-1426-SM-7DUGL 1 B1 6 pieces; well trimmed, epidermis measures 35 to 48 um thick 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1060 1241 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993064 311135 0.972157 0.993861 0.833298 23295 1 76 0.00268286 234 0 9.22283e+07 0.027541 359299 9.2798e+07 8.13982e+06 23320 4.59347e+07 0 0.138859 0.993861 0.828182 9.22283e+07 0.0041019 1.99111e+07 1.29367e+07 2.00159e+07 246 2.00594e+07 1.6674e+07 0.00339181 1.99448e+07 49.8568 0.00387184 0.994657 0 50.1312 GTEX-1B8SF-1726-SM-73KZ5 1 B1 2 pieces; lobulated mature adipose tissue with septal vessels 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1082 1219 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991382 172683 0.971799 0.99253 0.778584 23551 1 76 0.00268396 156 0 7.2303e+07 0.0279052 355687 7.28472e+07 7.47058e+06 23581 3.59991e+07 0 0.193215 0.99253 0.772768 7.2303e+07 0.00321292 1.59413e+07 7.65848e+06 1.59619e+07 171 1.59789e+07 1.13495e+07 0.00294814 1.60077e+07 50.045 0.00488265 0.993678 0 50.0323 GTEX-1B8SF-1826-SM-731DJ 1 B1 3 pieces; predominantly salivary gland elements, 1 piece includes ~25% fibrous stroma/skeletal muscle (outlined) 7.6 Salivary Gland Minor Salivary Gland 0006330 1097 1204 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991479 238048 0.971247 0.99315 0.764361 22591 1 76 0.00352066 147 0 5.28798e+07 0.0276927 161713 5.32445e+07 6.4635e+06 22610 2.62892e+07 0 0.206886 0.99315 0.759126 5.28798e+07 0.00388341 1.19252e+07 7.32433e+06 1.20076e+07 116 1.20895e+07 9.10637e+06 0.00370173 1.19298e+07 49.6676 0.00303718 0.994822 0 50.1721 GTEX-1B8SF-2926-SM-731DL 1 B1 2 pieces; spermatogenesis present, some hyalinized tubules 6.9 Testis Testis 0000473 1139 1162 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6684 01/21/2015 TruSeq.v1 RNASEQ 0.991016 948688 0.917094 0.992615 0.702839 34810 1 76 0.00264248 290 0 1.19457e+08 0.0825432 729607 1.20346e+08 1.04077e+07 34895 5.94445e+07 0 0.214255 0.992615 0.697649 1.19457e+08 0.00330047 2.43982e+07 1.86807e+07 2.45179e+07 260 2.46971e+07 2.01636e+07 0.00297095 2.43861e+07 49.6831 0.00606257 0.994215 0 50.1223 GTEX-1B8SF-3026-SM-731DX 2 B1 3 pieces with fragmentation; cerebellum, not cortex, portion of attached meninges 6.9 Brain Brain - Cerebellum 0002037 1176 1125 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.989276 488895 0.942435 0.991641 0.71673 23412 1 76 0.00331716 121 0 6.23938e+07 0.057226 999399 6.29198e+07 7.08223e+06 23439 3.09857e+07 0 0.225705 0.991641 0.710738 6.23938e+07 0.00407579 1.34257e+07 1.14483e+07 1.34604e+07 142 1.35704e+07 7.3233e+06 0.00369557 1.3449e+07 49.7752 0.0158837 0.994005 0 50.0646 GTEX-1B8SF-3126-SM-73KU1 1 B1 2 pieces and few fragments; cerebral cortex, not cerebellum 6.6 Brain Brain - Cortex 0001870 1175 1126 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992314 448665 0.967461 0.993453 0.840885 24238 1 76 0.00402092 370 0 1.05192e+08 0.0321434 5.42456e+06 1.05885e+08 4.99141e+06 24259 5.23713e+07 0 0.126576 0.993453 0.83538 1.05192e+08 0.00410404 2.29193e+07 2.24845e+07 2.34143e+07 346 2.3375e+07 1.23166e+07 0.00406243 2.30667e+07 49.6681 0.0512306 0.994591 0 50.5342 GTEX-1B8SG-0003-SM-7J3A3 B1 Blood Whole Blood 0013756 1014 BP-54043 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B8SG-0003-SM-7MD4Y B1 Blood Whole Blood 0013756 1014 BP-54043 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B8SG-0006-SM-7MKFA B1 7.4 Blood Whole Blood 0013756 1014 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.964622 403469 0.980505 0.969782 0.807897 18963 1 76 0.0032862 119 0 8.63832e+07 0.0183443 250025 8.90749e+07 1.07052e+07 18972 4.27928e+07 0 0.172608 0.969782 0.783484 8.63832e+07 0.00586995 2.01053e+07 1.12193e+08 1.998e+07 142 2.01569e+07 2.16792e+07 0.0045712 2.04015e+07 50.3015 0.00280691 0.974942 0 49.8437 GTEX-1B8SG-0008-SM-EXOHS B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1216 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991339 457564 0.981473 0.993263 0.850029 21626 1 76 0.00172642 292 0 1.12469e+08 0.0181704 425777 1.13232e+08 6.22926e+06 21651 5.60025e+07 0 0.131444 0.993263 0.844302 1.12469e+08 0.00268726 2.52666e+07 1.13086e+07 2.53943e+07 290 2.54402e+07 2.92115e+07 0.00220591 2.54245e+07 49.9846 0.00376022 0.995187 0 50.126 GTEX-1B8SG-0011-R11a-SM-7P8PF B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 991 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.984472 685416 0.946897 0.98703 0.812714 22849 1 76 0.00312603 267 0 9.78455e+07 0.0527961 5.24627e+06 9.91313e+07 1.4467e+07 22872 4.86686e+07 0 0.134183 0.98703 0.802173 9.78455e+07 0.00387876 2.06878e+07 3.40273e+07 2.14246e+07 292 2.14557e+07 8.80933e+06 0.00350142 2.08708e+07 49.309 0.0529225 0.989587 0 50.8748 GTEX-1B8SG-0011-R2b-SM-79OOT B1, A1 6.6 Brain Brain - Substantia nigra 0002038 991 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99269 165944 0.971266 0.992874 0.861999 21801 1 76 0.00293606 169 0 6.02236e+07 0.0284752 4.0213e+06 6.06559e+07 3.72307e+06 21815 2.99977e+07 0 0.109266 0.992874 0.855856 6.02236e+07 0.00419882 1.33494e+07 9.04746e+06 1.37117e+07 185 1.35401e+07 6.35463e+06 0.00356732 1.35179e+07 49.959 0.0662969 0.993058 0 50.6695 GTEX-1B8SG-0011-R8b-SM-7IGNW B1, A1 6.2 Brain Brain - Hypothalamus 0001898 991 BP-56897 RNA isolation_PAXgene Tissue miRNA 09/30/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.990899 208743 0.966524 0.99165 0.855084 21430 1 76 0.00192083 160 0 5.5091e+07 0.0332647 3.97721e+06 5.55548e+07 3.3658e+06 21440 2.74786e+07 0 0.11144 0.99165 0.847945 5.5091e+07 0.00239294 1.20318e+07 1.2469e+07 1.24654e+07 176 1.23417e+07 5.17182e+06 0.00215671 1.21878e+07 49.6863 0.0715907 0.992401 0 50.885 GTEX-1B8SG-0126-SM-73KZ3 1 B1 6 pieces; includes up to ~20% internal fat, epidermis measures 37 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1216 963 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993013 337914 0.973554 0.994322 0.7968 23024 1 76 0.00257178 170 0 7.35777e+07 0.0261795 252140 7.39978e+07 7.40409e+06 23047 3.66534e+07 0 0.176753 0.994322 0.792276 7.35777e+07 0.00318975 1.61938e+07 7.88393e+06 1.617e+07 166 1.6233e+07 1.34574e+07 0.00288036 1.62264e+07 49.9899 0.0034074 0.995632 0 49.9633 GTEX-1B8SG-0226-SM-7939Q 1 B1 2 pieces; mature adipose tissue, 5--10% fascia, few tissue defects (?poor fixation) 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1218 961 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991707 289731 0.976058 0.992712 0.801636 21350 1 76 0.00229256 133 0 5.91976e+07 0.0236498 322111 5.96323e+07 5.45872e+06 21369 2.94222e+07 0 0.174421 0.992712 0.795794 5.91976e+07 0.00298221 1.31077e+07 5.52647e+06 1.31003e+07 148 1.32276e+07 9.73058e+06 0.00263704 1.30412e+07 49.6451 0.00540162 0.993717 0 49.9858 GTEX-1B8SG-0326-SM-73KXW 1 B1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 1235 944 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.99478 310479 0.983005 0.995741 0.870294 18876 1 76 0.00231028 154 0 8.05544e+07 0.0167513 535138 8.08989e+07 8.09882e+06 18885 4.0158e+07 0 0.112711 0.995741 0.866587 8.05544e+07 0.00270798 1.71741e+07 7.95535e+06 1.74009e+07 193 1.74298e+07 1.65799e+07 0.00250894 1.72141e+07 49.6887 0.00661489 0.996703 0 50.328 GTEX-1B8SG-0426-SM-73KY9 1 B1 2 pieces; 1 piece has small partial rim of fat 6.6 Nerve Nerve - Tibial 0001323 1239 940 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.989856 228879 0.960195 0.990553 0.702741 23752 1 76 0.00274587 156 0 6.99776e+07 0.039572 255350 7.0645e+07 8.23713e+06 23794 3.4791e+07 0 0.257455 0.990553 0.696102 6.99776e+07 0.00331547 1.53423e+07 6.63664e+06 1.52826e+07 155 1.53438e+07 8.97522e+06 0.00303047 1.53323e+07 49.9811 0.00361455 0.991249 0 49.9025 GTEX-1B8SG-0526-SM-73KWP 1 B1 2 pieces; well trimmed 8.3 Blood Vessel Artery - Tibial 0007610 1241 938 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.994508 341917 0.973455 0.99541 0.817079 21917 1 76 0.00250984 209 0 9.32337e+07 0.0261723 224961 9.36635e+07 8.6607e+06 21941 4.64589e+07 0 0.156376 0.99541 0.813329 9.32337e+07 0.00289726 1.99515e+07 6.97423e+06 2.004e+07 243 2.00696e+07 1.81134e+07 0.00270338 2e+07 49.9133 0.0024018 0.996312 0 50.1106 GTEX-1B8SG-0626-SM-79OL3 1 B1 6 pieces; atherosclerosis 7 Blood Vessel Artery - Aorta 0001496 1339 840 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.971955 271265 0.969936 0.976226 0.743181 22738 1 76 0.00542909 118 0 6.36275e+07 0.0297404 75252 6.5177e+07 1.56273e+07 22765 3.1604e+07 0 0.226755 0.976226 0.725513 6.36275e+07 0.00680956 1.36546e+07 5.85821e+06 1.37061e+07 126 1.37978e+07 1.0333e+07 0.0061163 1.38227e+07 50.0451 0.00115458 0.980498 0 50.0941 GTEX-1B8SG-0726-SM-79ONS 1 B1 3 pieces; includes 5-10% fat and attached and separate fragments of organizing blood clot 6.7 Heart Heart - Atrial Appendage 0006631 1345 834 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993322 176887 0.969911 0.993248 0.759885 23245 1 76 0.00297992 123 0 6.60262e+07 0.0298626 643353 6.6475e+07 3.86408e+06 23268 3.28801e+07 0 0.210026 0.993248 0.754755 6.60262e+07 0.00418646 1.44211e+07 6.14228e+06 1.45517e+07 149 1.4552e+07 9.4472e+06 0.00358324 1.44136e+07 49.7611 0.00967811 0.993175 0 50.2253 GTEX-1B8SG-0826-SM-7EWF7 1 B1 2 pieces; some interstitial fibrosis and focal fatty degeneration 6.4 Heart Heart - Left Ventricle 0006566 1353 826 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993075 110971 0.980079 0.994924 0.832559 19909 1 76 0.00212708 122 0 5.43476e+07 0.0198167 2.28095e+06 5.46248e+07 4.74533e+06 19917 2.70754e+07 0 0.147519 0.994924 0.828334 5.43476e+07 0.00324454 1.19182e+07 1.34453e+07 1.211e+07 159 1.21292e+07 5.20752e+06 0.00268477 1.19813e+07 49.6932 0.0417566 0.996774 0 50.3992 GTEX-1B8SG-0926-SM-73KV6 1 B1 2 pieces; severe calcific atherosclerosis with hemorrhage within plaque and narrowing of the lumen 5.7 Blood Vessel Artery - Coronary 0001621 1360 819 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988027 284845 0.959123 0.989021 0.692026 26859 1 76 0.00446977 211 0 1.1593e+08 0.0404896 282702 1.17217e+08 5.6443e+06 26934 5.76154e+07 0 0.267097 0.989021 0.684428 1.1593e+08 0.00462703 2.51363e+07 1.2631e+07 2.52573e+07 244 2.52838e+07 1.64255e+07 0.00454832 2.5226e+07 49.9428 0.00241179 0.990014 0 50.1201 GTEX-1B8SG-1126-SM-7IGMT 2 B1 2 pieces; 1 piece is entirely thyroid, second includes 4mm parathyroid and surrounding stroma and fat/~50% thyroid, nodular goiter 6.1 Thyroid Thyroid 0002046 1378 801 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993929 322879 0.964819 0.99467 0.782755 23886 1 76 0.00216379 158 0 7.45857e+07 0.0349103 244782 7.49854e+07 5.12911e+06 23920 3.71673e+07 0 0.182064 0.99467 0.778583 7.45857e+07 0.00258259 1.62277e+07 7.28434e+06 1.64417e+07 177 1.64265e+07 1.20787e+07 0.00237303 1.62973e+07 49.8027 0.0032644 0.995411 0 50.3276 GTEX-1B8SG-1226-SM-7IGPF 1 B1 2 pieces; fat and dense stroma with multiple embedded ducts, some gynecomastoid change 5.9 Breast Breast - Mammary Tissue 0008367 1387 792 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994357 79296 0.976404 0.994299 0.843356 22541 1 76 0.00184766 152 0 6.09776e+07 0.0232483 240195 6.13272e+07 2.97186e+06 22563 3.03849e+07 0 0.133049 0.994299 0.838548 6.09776e+07 0.00226745 1.3345e+07 7.34642e+06 1.35164e+07 146 1.34943e+07 1.41258e+07 0.00205757 1.33735e+07 49.7753 0.00391661 0.994241 0 50.3189 GTEX-1B8SG-1326-SM-79ONT 1 B1 2 pieces; congested, includes portion of capsule (not target region) 6.6 Liver Liver 0001114 1396 783 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993911 199456 0.978216 0.994123 0.825977 20768 1 76 0.00302983 130 0 7.04498e+07 0.0209911 381532 7.08663e+07 4.12305e+06 20791 3.5083e+07 0 0.152238 0.994123 0.821123 7.04498e+07 0.00420249 1.55512e+07 9.01254e+06 1.56687e+07 161 1.57012e+07 1.30773e+07 0.00361604 1.55299e+07 49.7258 0.00538383 0.994335 0 50.1881 GTEX-1B8SG-1426-SM-7EWEM 1 B1 2 pieces; mature fat 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1401 778 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990927 141832 0.973533 0.992853 0.793643 22907 1 76 0.00235984 137 0 6.59462e+07 0.0262281 154271 6.64209e+07 5.69707e+06 22933 3.28247e+07 0 0.17989 0.992853 0.787971 6.59462e+07 0.00350871 1.44978e+07 6.82473e+06 1.46149e+07 157 1.46225e+07 1.04505e+07 0.00293316 1.46126e+07 49.9831 0.00232263 0.99478 0 50.2011 GTEX-1B8SG-1726-SM-73KXK 2 B1 2 pieces 6.1 Brain Brain - Cortex 0001870 1456 723 BP-55723 RNA Extraction from Paxgene-derived Lysate Plate Based 08/05/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993861 166271 0.979059 0.995027 0.868187 21690 1 76 0.00229415 367 0 7.99143e+07 0.0207603 7.90395e+06 8.03137e+07 8.03785e+06 21702 3.98193e+07 0 0.110872 0.995027 0.86387 7.99143e+07 0.00267087 1.75485e+07 1.59331e+07 1.81434e+07 363 1.77247e+07 4.88862e+06 0.00248229 1.80329e+07 50.431 0.0984135 0.996194 0 50.8334 GTEX-1B8SG-1826-SM-731F3 2 B1 1 piece; predominantly adenohypophysis, small portion of neurohypophysis 6.2 Pituitary Pituitary 0000007 1460 719 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.98911 432372 0.961679 0.991825 0.800698 24024 1 76 0.00303673 134 0 6.53388e+07 0.0379879 75585 6.58774e+07 7.33607e+06 24049 3.24652e+07 0 0.160981 0.991825 0.794152 6.53388e+07 0.00392816 1.34175e+07 1.21512e+07 1.3482e+07 141 1.35732e+07 1.2967e+07 0.00348123 1.34897e+07 49.8456 0.00114736 0.99454 0 50.1199 GTEX-1B8SG-1926-SM-73KUB 3 B1 2 pieces; severely autolyzed cerebellum, unable to distinguish hypoxic from autolytic changes 6.4 Brain Brain - Cerebellum 0002037 1458 721 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.988725 573207 0.947334 0.99001 0.761848 23981 1 76 0.00418938 267 0 9.43143e+07 0.0523565 4.06246e+06 9.52659e+07 4.04353e+06 24015 4.68995e+07 0 0.185486 0.99001 0.754237 9.43143e+07 0.00446175 2.01651e+07 2.47395e+07 2.06604e+07 267 2.05907e+07 9.59789e+06 0.00432539 2.03517e+07 49.7081 0.0426433 0.991296 0 50.6066 GTEX-1B932-0003-SM-7J39T B1 Blood Whole Blood 0013756 -38 BP-54089 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2014 LCSET-6780 02/28/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B932-0003-SM-7MD4Q B1 Blood Whole Blood 0013756 -38 BP-54089 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B932-0005-SM-9KNTP B1 7.7 Blood Whole Blood 0013756 -38 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.986284 1.39715e+06 0.936072 0.987891 0.773981 19976 1 76 0.00260029 154 0 9.77324e+07 0.0634138 345010 9.89303e+07 1.09704e+07 19989 4.86662e+07 0 0.162091 0.987891 0.764609 9.77324e+07 0.00429163 2.09887e+07 9.09534e+07 2.12992e+07 173 2.13272e+07 2.09386e+07 0.00344459 2.11615e+07 49.805 0.0034874 0.989497 0 50.3671 GTEX-1B932-0008-SM-EXOHW B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 224 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991646 541340 0.979056 0.99362 0.856085 21498 1 76 0.00169474 295 0 1.28133e+08 0.0206322 192286 1.28955e+08 7.05905e+06 21520 6.38051e+07 0 0.122971 0.99362 0.850623 1.28133e+08 0.00279966 2.87252e+07 1.63756e+07 2.89811e+07 325 2.90648e+07 3.359e+07 0.0022461 2.88802e+07 49.8407 0.0014911 0.995593 0 50.2218 GTEX-1B932-0126-SM-7PC2M 0 B1 4 pieces; ~15% internal (periadnexal) fat; epidermis ~39um thick 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 227 1028 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6762 04/10/2015 TruSeq.v1 EXCLUDE 0.987865 543654 0.972422 0.991291 0.804999 26237 1 76 0.00335276 385 0 1.26132e+08 0.0272446 677951 1.2724e+08 2.01319e+07 26282 6.26279e+07 0 0.167422 0.991291 0.797989 1.26132e+08 0.00484152 2.75653e+07 1.13285e+07 2.78755e+07 342 2.80932e+07 2.24442e+07 0.00409457 2.7758e+07 49.6999 0.00532814 0.994718 0 50.2798 GTEX-1B932-0226-SM-7PBYH 0 B1 2 pieces; ~15 to 20% fibrovascular component with small nerves, central defects (?poor fixation) 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 230 1025 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988539 214743 0.973451 0.99238 0.806354 25122 1 76 0.00283814 381 0 1.25004e+08 0.0262735 904076 1.25964e+08 1.5719e+07 25165 6.21278e+07 0 0.167096 0.99238 0.80021 1.25004e+08 0.00502639 2.73428e+07 1.21834e+07 2.75946e+07 348 2.77074e+07 1.99752e+07 0.00392803 2.7673e+07 49.9689 0.00717725 0.996222 0 50.2291 GTEX-1B932-0326-SM-7IGMV 0 B1 2 pieces; ~10% internal fat 6.2 Nerve Nerve - Tibial 0001323 234 1021 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995101 163464 0.970671 0.995814 0.771179 23011 1 76 0.00211215 138 0 5.72723e+07 0.0290078 227332 5.75131e+07 3.59952e+06 23034 2.85522e+07 0 0.199492 0.995814 0.767951 5.72723e+07 0.00275599 1.2623e+07 4.58241e+06 1.27239e+07 131 1.27039e+07 9.55027e+06 0.00243384 1.26838e+07 49.9603 0.0039527 0.996528 0 50.1989 GTEX-1B932-0426-SM-73KX4 1 B1 2 pieces; some attached adventitia 7.3 Blood Vessel Artery - Tibial 0007610 236 1019 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992962 282033 0.97609 0.994201 0.836305 22291 1 76 0.00258321 217 0 8.90389e+07 0.0235151 439980 8.95583e+07 8.94234e+06 22310 4.43336e+07 0 0.139785 0.994201 0.831455 8.90389e+07 0.00322427 1.93209e+07 5.94448e+06 1.93822e+07 224 1.93852e+07 1.67059e+07 0.00290334 1.94264e+07 50.0531 0.00491278 0.995441 0 50.0791 GTEX-1B932-0526-SM-73KU7 0 B1 2 pieces; 1 piece includes ~5-10% internal fat/vessels 8.4 Muscle Muscle - Skeletal 0011907 239 1016 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993194 344305 0.979873 0.994287 0.854565 21014 1 76 0.0039062 273 0 9.77024e+07 0.0198982 1.10293e+06 9.82638e+07 4.12797e+06 21030 4.86739e+07 0 0.125308 0.994287 0.849683 9.77024e+07 0.00398061 2.09921e+07 1.19951e+07 2.14019e+07 257 2.14307e+07 1.8631e+07 0.00394336 2.10668e+07 49.5719 0.0112242 0.995379 0 50.4833 GTEX-1B932-0626-SM-731EM 0 B1 2 pieces; 60-70% salivary gland elements with 30-40% stroma and skeletal muscle (outlined) 7.5 Salivary Gland Minor Salivary Gland 0006330 246 1009 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990459 486642 0.971513 0.992302 0.79085 23412 1 76 0.00356534 130 0 6.45596e+07 0.0279291 501342 6.50604e+07 8.70028e+06 23432 3.20671e+07 0 0.180664 0.992302 0.784762 6.45596e+07 0.00397807 1.41806e+07 6.72635e+06 1.43036e+07 144 1.43983e+07 1.05192e+07 0.00377132 1.41935e+07 49.6419 0.0077058 0.994146 0 50.2159 GTEX-1B932-0726-SM-731EY 1 B1 2 pieces; congestion, emphysematous-like changes, focally collapsed alveolar spaces and focal anthacosis 7.7 Lung Lung 0008952 250 1005 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.990236 407196 0.972634 0.992538 0.747942 24005 1 76 0.00328505 124 0 6.32888e+07 0.0269948 244742 6.37646e+07 7.27764e+06 24035 3.14471e+07 0 0.224692 0.992538 0.742361 6.32888e+07 0.00392818 1.40976e+07 5.21794e+06 1.4053e+07 133 1.41874e+07 1.02331e+07 0.00360587 1.40991e+07 49.8439 0.00383821 0.99484 0 49.9208 GTEX-1B932-0826-SM-73KXG 1 B1 2 pieces; fat and dense fibrocollagenous stroma with scattered ductal structures and a few lobules (outlined) 7.4 Breast Breast - Mammary Tissue 0008367 259 996 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.9929 295128 0.970374 0.994059 0.754463 24675 1 76 0.00270459 156 0 7.74069e+07 0.0292231 448351 7.78695e+07 7.54205e+06 24711 3.85397e+07 0 0.215911 0.994059 0.749981 7.74069e+07 0.00329013 1.71523e+07 6.31529e+06 1.71495e+07 170 1.71915e+07 1.21556e+07 0.00299702 1.71989e+07 50.0108 0.00575772 0.995219 0 49.996 GTEX-1B932-0926-SM-73KUP 1 B1 2 pieces; some interstitial fibrosis 6.5 Thyroid Thyroid 0002046 260 995 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990398 329565 0.963289 0.991632 0.721421 25374 1 76 0.00421154 196 0 9.79687e+07 0.0364587 378012 9.87954e+07 4.47415e+06 25419 4.87323e+07 0 0.241868 0.991632 0.715384 9.79687e+07 0.00449197 2.13883e+07 9.32162e+06 2.14755e+07 209 2.15287e+07 1.32043e+07 0.00435158 2.14533e+07 49.9123 0.00382621 0.992865 0 50.1017 GTEX-1B932-1026-SM-793CL 1 B1 2 pieces; fatty degeneration (disseminated fatty streaks in association with interstitial vessels); focal small inflammatory cell infiltrate (outlined) 7.6 Heart Heart - Left Ventricle 0006566 275 980 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993692 394921 0.974152 0.995047 0.779071 21725 1 76 0.00296878 124 0 6.67938e+07 0.0256295 1.4399e+06 6.71263e+07 8.44178e+06 21754 3.32744e+07 0 0.195081 0.995047 0.775212 6.67938e+07 0.00362221 1.47061e+07 7.04241e+06 1.47623e+07 148 1.48355e+07 1.01447e+07 0.00329505 1.47186e+07 49.8023 0.0214506 0.996402 0 50.0953 GTEX-1B932-1226-SM-7PBYN 1 B1 2 pieces; eccentric fibrosclerotic plaques with ~50% and >75% luminal compromise 5.8 Blood Vessel Artery - Coronary 0001621 286 969 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986207 169828 0.966122 0.990634 0.761051 23624 1 76 0.00308089 211 0 9.35177e+07 0.0335762 407564 9.44019e+07 1.29569e+07 23658 4.64251e+07 0 0.205072 0.990634 0.753923 9.35177e+07 0.00517152 1.98789e+07 8.23217e+06 2.00685e+07 219 2.01644e+07 1.4498e+07 0.00412154 2.017e+07 50.0069 0.00431733 0.995061 0 50.2373 GTEX-1B932-1326-SM-79OM4 1 B1 2 pieces; 1 piece includes ~5-10% fat 7.1 Heart Heart - Atrial Appendage 0006631 296 959 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977078 163827 0.978095 0.980963 0.802347 21178 1 76 0.00540022 106 0 5.79541e+07 0.0217394 1.81283e+06 5.90788e+07 1.41598e+07 21193 2.88422e+07 0 0.175748 0.980963 0.787073 5.79541e+07 0.00661196 1.24749e+07 1.06542e+07 1.26941e+07 137 1.27547e+07 6.64756e+06 0.00600369 1.26116e+07 49.718 0.030685 0.984848 0 50.4353 GTEX-1B932-1426-SM-793AN 1 B1 2 pieces; mild steatosis and congestion 8.5 Liver Liver 0001114 299 956 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992504 396664 0.977756 0.993245 0.838576 20118 1 76 0.00230308 116 0 5.95533e+07 0.0213932 507691 5.99583e+07 5.74246e+06 20130 2.95705e+07 0 0.139181 0.993245 0.832911 5.95533e+07 0.00289095 1.3042e+07 8.83268e+06 1.29674e+07 136 1.31078e+07 1.2076e+07 0.00259679 1.294e+07 49.6779 0.0084674 0.993986 0 49.8566 GTEX-1B932-1626-SM-731EA 1 B1 2 pieces;~10% internal fat/vessels; islets noted (rep outlined) 7.9 Pancreas Pancreas 0001150 309 946 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.99082 321975 0.981064 0.993365 0.850398 21373 1 76 0.00308038 112 0 6.55757e+07 0.0187484 153724 6.60137e+07 7.57139e+06 21383 3.25969e+07 0 0.130666 0.993365 0.844756 6.55757e+07 0.00385062 1.49938e+07 1.07818e+07 1.50395e+07 116 1.51866e+07 1.85628e+07 0.00346451 1.50088e+07 49.7056 0.00232867 0.99591 0 50.0761 GTEX-1B932-1726-SM-793A5 1 B1 2 pieces; mature adipose tissue; one piece is associated with a small fragment of hepatic parenchyma (outlined) 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 312 943 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994408 237346 0.973909 0.994991 0.79869 22275 1 76 0.00186676 120 0 5.38844e+07 0.0257989 265937 5.41556e+07 2.51976e+06 22291 2.68377e+07 0 0.175219 0.994991 0.79469 5.38844e+07 0.00228483 1.19171e+07 4.43588e+06 1.19397e+07 127 1.19862e+07 9.6076e+06 0.00207567 1.19013e+07 49.8223 0.00491061 0.995574 0 50.0472 GTEX-1B932-1826-SM-73KTU 1 B1 6 pieces; ~0.5mm thick squamous epithelium; submucosal chronic inflammatory cell infiltrate (arrows); small amount of residual muscularis (not target, attached and detached) 7.6 Esophagus Esophagus - Mucosa 0006920 322 933 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.990173 254527 0.970421 0.991185 0.778127 23908 1 76 0.00416528 281 0 1.01436e+08 0.0292899 458697 1.02338e+08 4.40387e+06 23950 5.05052e+07 0 0.192295 0.991185 0.771268 1.01436e+08 0.00403296 2.18344e+07 8.49483e+06 2.21361e+07 260 2.21174e+07 1.67146e+07 0.00409918 2.19508e+07 49.8109 0.00448219 0.992198 0 50.3431 GTEX-1B932-1926-SM-79OOA 1 B1 6 pieces; target muscularis present 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 336 919 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.992101 259527 0.968436 0.992512 0.776556 23890 1 76 0.00291926 166 0 8.2759e+07 0.0313324 630127 8.33833e+07 6.44532e+06 23929 4.11999e+07 0 0.19188 0.992512 0.770742 8.2759e+07 0.00392081 1.80317e+07 7.33993e+06 1.81547e+07 201 1.81555e+07 1.21201e+07 0.00341983 1.80644e+07 49.8742 0.00755699 0.992923 0 50.17 GTEX-1B932-2126-SM-7IGMU 1 B1 6 pieces; tagret muscularis present, few pieces have very small residual fragments of colonic mucosa (outlined) 6.1 Colon Colon - Sigmoid 0001159 343 912 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994518 385937 0.972457 0.995394 0.813107 23845 1 76 0.00199744 281 0 1.00159e+08 0.0272961 739487 1.00622e+08 6.19517e+06 23877 4.9924e+07 0 0.159351 0.995394 0.809361 1.00159e+08 0.00280194 2.17221e+07 9.96707e+06 2.19985e+07 330 2.19268e+07 1.60496e+07 0.00239934 2.18785e+07 49.9449 0.00734914 0.99627 0 50.316 GTEX-1B932-2326-SM-79OL5 1 B1 6 pieces; well trimmed 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 348 907 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380,LCSET-6779,LCSET-6917 03/14/2015 TruSeq.v1 RNASEQ 0.988456 441823 0.969802 0.990944 0.775062 26413 1 76 0.00303721 395 0 1.48325e+08 0.0299568 841554 1.4968e+08 2.23626e+07 26459 7.37899e+07 0 0.194741 0.990944 0.768043 1.48325e+08 0.0045014 3.24305e+07 1.55709e+07 3.27585e+07 375 3.27964e+07 2.31166e+07 0.00376747 3.27489e+07 49.9637 0.00562234 0.993431 0 50.2516 GTEX-1B932-2626-SM-73KWR 1 B1 6 pieces; target muscularis, but includes significant portion of residual fat/nerve/fibrous tissue and (? detached) small fragment of skeletal muscle (arrow) 7.3 Esophagus Esophagus - Muscularis 0004648 356 899 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992421 305390 0.971382 0.993664 0.793736 23486 1 76 0.00268105 166 0 7.55442e+07 0.0283316 544655 7.60259e+07 7.90508e+06 23514 3.76048e+07 0 0.177646 0.993664 0.788707 7.55442e+07 0.00332768 1.65357e+07 6.2734e+06 1.65641e+07 179 1.66123e+07 1.21436e+07 0.00300396 1.658e+07 49.9513 0.00716407 0.994907 0 50.0429 GTEX-1B932-2726-SM-731ER 1 B1 2 pieces; myometrium and one piece with endomerium (outlined); 6.5 Uterus Uterus 0000995 362 893 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990334 269811 0.966499 0.992178 0.763085 23056 1 76 0.00344889 123 0 6.02847e+07 0.0332846 187484 6.076e+07 7.77564e+06 23088 2.9973e+07 0 0.203414 0.992178 0.757116 6.02847e+07 0.00401165 1.31621e+07 6.08450e+06 1.33351e+07 138 1.33868e+07 8.46794e+06 0.00372975 1.32153e+07 49.6775 0.00308565 0.994022 0 50.3264 GTEX-1B932-2826-SM-73KUD 1 B1 6 pieces; mildly autolyzed colonic mucosa and well preserved muscularis 7 Colon Colon - Transverse 0001157 371 884 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990404 279320 0.974819 0.991685 0.807726 24849 1 76 0.00441135 280 0 9.87865e+07 0.0240386 976765 9.96148e+07 4.46541e+06 24889 4.91272e+07 0 0.167093 0.991685 0.80101 9.87865e+07 0.00456355 2.19324e+07 1.17253e+07 2.22087e+07 257 2.22182e+07 1.5349e+07 0.00448735 2.20452e+07 49.8045 0.00980542 0.992966 0 50.313 GTEX-1B932-5004-SM-AN45R B1 Muscle Muscle - Skeletal 0011907 242 ChIP-Seq GTEX-1B932-5007-SM-AN45T B1 Lung Lung 0008952 250 ChIP-Seq GTEX-1B932-5013-SM-AN45S B1 Heart Heart - Left Ventricle 0006566 276 ChIP-Seq GTEX-1B933-0003-SM-7J3A4 B1 Blood Whole Blood 0013756 547 BP-54089 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B933-0003-SM-7MD4Z B1 Blood Whole Blood 0013756 547 BP-54089 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/19/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B933-0006-SM-7P8OP B1 7.3 Blood Whole Blood 0013756 547 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.96626 416843 0.978928 0.9683 0.808833 17787 1 76 0.00283474 97 0 8.37807e+07 0.0195581 245715 8.65235e+07 1.07171e+07 17793 4.16584e+07 0 0.170095 0.9683 0.783193 8.37807e+07 0.00460991 1.98579e+07 1.46534e+08 1.98398e+07 135 1.98901e+07 2.28505e+07 0.00372045 1.99928e+07 50.1287 0.00283986 0.970339 0 49.9773 GTEX-1B933-0008-SM-EXOHV B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 653 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991059 611029 0.983364 0.99319 0.861543 21312 1 76 0.00170795 295 0 1.19353e+08 0.0163259 198127 1.20172e+08 6.76862e+06 21336 5.94096e+07 0 0.121821 0.99319 0.855675 1.19353e+08 0.00289434 2.68916e+07 9.96849e+06 2.7039e+07 312 2.7152e+07 3.11134e+07 0.00229987 2.70158e+07 49.8743 0.0016487 0.99532 0 50.1366 GTEX-1B933-0011-R10b-SM-9OSVN B1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 549 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99077 479048 0.96536 0.993712 0.85446 24054 1 76 0.0025912 271 0 1.00171e+08 0.0341397 3.07402e+06 1.00805e+08 9.99483e+06 24069 4.98261e+07 0 0.1109 0.993712 0.849087 1.00171e+08 0.00343998 2.18518e+07 1.73788e+07 2.21099e+07 306 2.21169e+07 1.33808e+07 0.00301433 2.21014e+07 49.9824 0.0304947 0.996654 0 50.2935 GTEX-1B933-0011-R11a-SM-7P8PM B1, A1 6.5 Brain Brain - Cerebellar Hemisphere 0002037 549 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989233 611226 0.950346 0.991481 0.782447 24299 1 76 0.00333956 275 0 1.22006e+08 0.0492818 1.70416e+06 1.23054e+08 1.71307e+07 24341 6.06876e+07 0 0.167899 0.991481 0.775782 1.22006e+08 0.00437247 2.61732e+07 1.95598e+07 2.6618e+07 311 2.67318e+07 1.50818e+07 0.00385485 2.6305e+07 49.5976 0.0138488 0.993729 0 50.4213 GTEX-1B933-0011-R1b-SM-9QEGW B1, A1 6.3 Brain Brain - Hippocampus 0001954 549 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989339 543163 0.957635 0.992505 0.835987 24166 1 76 0.00207837 274 0 9.04967e+07 0.0420119 4.15839e+06 9.118e+07 4.14552e+06 24191 4.50153e+07 0 0.121649 0.992505 0.829721 9.04967e+07 0.00402294 1.96878e+07 1.96266e+07 2.00322e+07 316 2.00607e+07 1.07876e+07 0.00304756 1.99139e+07 49.8163 0.0456063 0.995672 0 50.4335 GTEX-1B933-0011-R2b-SM-7IGNM B1, A1 6.3 Brain Brain - Substantia nigra 0002038 549 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995263 360629 0.967654 0.996015 0.850827 24088 1 76 0.00198434 278 0 9.72974e+07 0.0319759 4.28426e+06 9.76867e+07 5.14069e+06 24109 4.85261e+07 0 0.116827 0.996015 0.847437 9.72974e+07 0.00269325 2.15028e+07 1.32896e+07 2.18055e+07 310 2.17543e+07 1.30222e+07 0.00233853 2.16185e+07 49.8435 0.0438571 0.996767 0 50.3496 GTEX-1B933-0011-R3b-SM-7P8PL B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 549 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990463 530941 0.961699 0.992487 0.851718 24724 1 76 0.00327105 274 0 1.21267e+08 0.0378741 5.9197e+06 1.22185e+08 1.82546e+07 24748 6.03645e+07 0 0.109981 0.992487 0.845319 1.21267e+08 0.00397487 2.63024e+07 2.39682e+07 2.69961e+07 314 2.70098e+07 1.48284e+07 0.00362225 2.6499e+07 49.5227 0.0484485 0.99451 0 50.6508 GTEX-1B933-0011-R5b-SM-7P8SA B1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 549 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.944849 579760 0.954585 0.969875 0.826987 24828 1 76 0.00483345 268 0 8.73922e+07 0.0451192 4.08806e+06 9.01066e+07 1.5158e+07 24844 4.2439e+07 0 0.127598 0.969875 0.802074 8.73922e+07 0.00808733 1.85307e+07 2.60629e+07 1.846e+07 256 1.9559e+07 9.75583e+06 0.00641841 1.94536e+07 49.8648 0.0453691 0.994902 0 49.9045 GTEX-1B933-0011-R6b-SM-79OOQ B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 549 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993547 281402 0.959422 0.993909 0.8226 23026 1 76 0.00320924 126 0 5.92598e+07 0.0400357 1.99508e+06 5.9623e+07 3.39089e+06 23042 2.95216e+07 0 0.136822 0.993909 0.817589 5.92598e+07 0.00439314 1.29742e+07 7.79972e+06 1.30729e+07 145 1.31001e+07 8.36396e+06 0.00380097 1.29701e+07 49.7507 0.0334617 0.994271 0 50.1895 GTEX-1B933-0011-R7a-SM-7DUGX B1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 549 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992976 654370 0.958079 0.993878 0.828143 24419 1 76 0.00287976 269 0 9.54827e+07 0.0414758 3.43763e+06 9.60709e+07 8.5686e+06 24436 4.75591e+07 0 0.129936 0.993878 0.823073 9.54827e+07 0.0040705 2.07918e+07 1.99424e+07 2.11015e+07 293 2.11563e+07 1.25313e+07 0.00347459 2.08273e+07 49.6082 0.0357822 0.994779 0 50.3697 GTEX-1B933-0011-R8a-SM-9QEGX B1, A1 7.4 Brain Brain - Hypothalamus 0001898 549 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990551 482144 0.962339 0.993243 0.841441 24965 1 76 0.0019665 272 0 8.96861e+07 0.0372329 2.3799e+06 9.02963e+07 4.13606e+06 24987 4.46263e+07 0 0.120898 0.993243 0.835755 8.96861e+07 0.00378455 1.97439e+07 1.2287e+07 1.98748e+07 288 1.99552e+07 1.28984e+07 0.00287306 1.98785e+07 49.9038 0.0263566 0.995935 0 50.1652 GTEX-1B933-0011-R9a-SM-79OOR B1, A1 6.7 Brain Brain - Spinal cord (cervical c-1) 0006469 549 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993752 176610 0.965955 0.993862 0.832317 23008 1 76 0.00302821 152 0 6.24884e+07 0.0336685 1.29548e+06 6.28743e+07 3.60902e+06 23025 3.11336e+07 0 0.133638 0.993862 0.827209 6.24884e+07 0.00423932 1.39196e+07 5.44373e+06 1.40961e+07 158 1.40516e+07 9.43454e+06 0.00363369 1.39692e+07 49.8529 0.0206043 0.993972 0 50.3149 GTEX-1B933-0126-SM-7PC29 0 B1 6 pieces, squamous epithelium is ~40 microns, no adherent dermal fat. 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 654 676 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762,LCSET-7212 05/09/2015 TruSeq.v1 RNASEQ 0.992458 450160 0.974112 0.993902 0.793211 25328 1 76 0.00273909 286 0 1.11404e+08 0.0256028 631038 1.12088e+08 1.00311e+07 25372 5.54675e+07 0 0.180901 0.993902 0.788374 1.11404e+08 0.00334022 2.43704e+07 1.22205e+07 2.45081e+07 324 2.46209e+07 1.89912e+07 0.00303922 2.44086e+07 49.7835 0.00562987 0.995345 0 50.1409 GTEX-1B933-0226-SM-7SB6Z 0 B1 2 pieces, no adherent fat 6.4 Nerve Nerve - Tibial 0001323 657 673 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.984657 252552 0.955914 0.986677 0.618956 27287 1 76 0.00306644 216 0 1.01839e+08 0.0438317 457071 1.03215e+08 1.11486e+07 27373 5.06676e+07 0 0.336959 0.986677 0.610709 1.01839e+08 0.00428738 2.22083e+07 1.18371e+07 2.24234e+07 211 2.24647e+07 1.20928e+07 0.00367566 2.23614e+07 49.8847 0.00442836 0.988697 0 50.241 GTEX-1B933-0326-SM-7SB71 0 B1 2 pieces, no adherent fat 6.9 Blood Vessel Artery - Tibial 0007610 660 670 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990183 164133 0.963807 0.992176 0.718093 23850 1 76 0.00286828 171 0 8.53205e+07 0.0358434 410169 8.59933e+07 9.39536e+06 23898 4.24482e+07 0 0.245715 0.992176 0.712474 8.53205e+07 0.00421931 1.83394e+07 9.3835e+06 1.85386e+07 176 1.85625e+07 1.34566e+07 0.00354243 1.84754e+07 49.8823 0.00476978 0.994169 0 50.2701 GTEX-1B933-0426-SM-7DHMC 0 B1 2 pieces, ~10-15% interstitial fat, rep delineated 8 Muscle Muscle - Skeletal 0011907 665 665 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99196 130683 0.98351 0.993293 0.875022 19514 1 76 0.00337904 154 0 7.76444e+07 0.0162728 1.07936e+06 7.81687e+07 5.89257e+06 19528 3.86833e+07 0 0.108488 0.993293 0.869153 7.76444e+07 0.00510555 1.6882e+07 7.14449e+06 1.70809e+07 172 1.70981e+07 1.66021e+07 0.00424114 1.69553e+07 49.7904 0.0138082 0.994626 0 50.2927 GTEX-1B933-0526-SM-7EPHM 0 B1 2 pieces, ~25% fascia/vascular elements, rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 668 662 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990867 188034 0.975478 0.993147 0.806668 23998 1 76 0.00314933 143 0 8.46318e+07 0.0241316 377352 8.52158e+07 1.0856e+07 24024 4.21441e+07 0 0.168809 0.993147 0.80114 8.46318e+07 0.0117207 1.86064e+07 8.07802e+06 1.87873e+07 145 1.88366e+07 1.61284e+07 0.00742518 1.87363e+07 49.8665 0.00442819 0.995426 0 50.2418 GTEX-1B933-0826-SM-79OMW 1 B1 2 pieces, abundant epicardial fat, rep delineated 6.6 Heart Heart - Atrial Appendage 0006631 702 628 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.99404 135003 0.978808 0.994181 0.834375 21989 1 76 0.00328122 195 0 8.12354e+07 0.0204803 4.43922e+06 8.17109e+07 4.84303e+06 22007 4.04576e+07 0 0.144433 0.994181 0.82952 8.12354e+07 0.00454162 1.74624e+07 8.9725e+06 1.77152e+07 246 1.77373e+07 1.04186e+07 0.00391133 1.74491e+07 49.5905 0.0543283 0.994322 0 50.3593 GTEX-1B933-0926-SM-9OSVH 1 B1 2 pieces, moderate congestion/atalectasis. Prominent bronchus, well preserved mucosa, delineated. Hyaline cartilage present 6.4 Lung Lung 0008952 709 621 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990103 432953 0.97142 0.992788 0.712231 26861 1 76 0.00287257 380 0 1.66945e+08 0.0281951 1.06856e+06 1.68157e+08 1.55138e+07 26937 8.30288e+07 0 0.259189 0.992788 0.707094 1.66945e+08 0.00405004 3.68569e+07 1.81312e+07 3.71728e+07 343 3.73033e+07 2.11252e+07 0.00345971 3.71482e+07 49.8959 0.0063545 0.995472 0 50.2133 GTEX-1B933-1026-SM-7P8RO 1 B1 2 pieces, no abnormalities 6.5 Thyroid Thyroid 0002046 712 618 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.944093 270260 0.964229 0.969147 0.734547 25384 1 76 0.00471179 140 0 8.2636e+07 0.0354673 300551 8.52667e+07 1.41273e+07 25426 4.01192e+07 0 0.229682 0.969147 0.711884 8.2636e+07 0.00804185 1.74957e+07 1.09885e+07 1.77085e+07 151 1.87889e+07 1.29376e+07 0.00633378 1.84408e+07 49.5324 0.00352483 0.994201 0 50.3023 GTEX-1B933-1126-SM-73KX2 1 B1 6 pieces atherosis up to ~1.5mm 7 Blood Vessel Artery - Aorta 0001496 713 617 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.991512 306418 0.972637 0.992753 0.748805 23185 1 76 0.00287899 159 0 8.26374e+07 0.0269667 237183 8.32406e+07 7.55167e+06 23213 4.11148e+07 0 0.223831 0.992753 0.743379 8.26374e+07 0.00345582 1.79225e+07 6.76653e+06 1.79156e+07 175 1.79521e+07 1.37441e+07 0.00316704 1.79901e+07 50.0528 0.00284937 0.993995 0 49.9904 GTEX-1B933-1226-SM-731DW 1 B1 2 pieces, diffuse macrovesicular steatosis involves ~70% of parenchyma 6.6 Liver Liver 0001114 716 614 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.991096 219908 0.966208 0.993109 0.776944 21282 1 76 0.00355986 106 0 5.30349e+07 0.0336834 801722 5.34029e+07 6.53721e+06 21301 2.63751e+07 0 0.189264 0.993109 0.77159 5.30349e+07 0.00420873 1.15209e+07 6.33812e+06 1.18122e+07 130 1.18282e+07 6.20428e+06 0.00388364 1.15977e+07 49.5081 0.0150127 0.995121 0 50.6241 GTEX-1B933-1326-SM-7939U 1 B1 2 pieces, minimal (<5%) fascia/vascular elements 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 718 612 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.990736 179353 0.974354 0.990687 0.805326 22002 1 76 0.00222431 127 0 5.59756e+07 0.0252932 592280 5.65018e+07 3.58694e+06 22023 2.78247e+07 0 0.169028 0.990687 0.797827 5.59756e+07 0.00265076 1.23605e+07 6.11817e+06 1.2374e+07 145 1.24575e+07 8.75008e+06 0.00243754 1.22791e+07 49.6395 0.0104825 0.990639 0 50.0274 GTEX-1B933-1726-SM-731FC 2 B1 2 pieces, moderate saponification. Islets still visible; rep delineated, but degrading 6.4 Pancreas Pancreas 0001150 734 596 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.988999 234264 0.971957 0.991853 0.795798 21887 1 76 0.0031351 102 0 6.9313e+07 0.027883 477203 6.98823e+07 8.23743e+06 21903 3.44569e+07 0 0.176159 0.991853 0.789315 6.9313e+07 0.0042632 1.56063e+07 1.77643e+07 1.59282e+07 115 1.59123e+07 1.77254e+07 0.00369753 1.58116e+07 49.8413 0.00682867 0.994706 0 50.5103 GTEX-1B933-1926-SM-73KUN 1 B1 6 pieces, confirmed target muscularis 6.4 Esophagus Esophagus - Muscularis 0004648 758 572 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990027 224548 0.969445 0.991332 0.817254 22728 1 76 0.00435286 195 0 8.30325e+07 0.0303853 1.63477e+06 8.37585e+07 3.85134e+06 22749 4.12967e+07 0 0.152192 0.991332 0.81017 8.30325e+07 0.00475738 1.77483e+07 8.44723e+06 1.80537e+07 216 1.80029e+07 1.03126e+07 0.00455486 1.79049e+07 49.8636 0.0195177 0.992638 0 50.4265 GTEX-1B933-2026-SM-7EWFC 1 B1 6 pieces, squamous mucosa up to ~0.4mm, submucosal mucusa glands delineated 6.3 Esophagus Esophagus - Mucosa 0006920 760 570 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991191 106406 0.975599 0.993052 0.800824 21112 1 76 0.00240544 109 0 5.39204e+07 0.0241293 485489 5.42977e+07 4.58339e+06 21125 2.68543e+07 0 0.174775 0.993052 0.79526 5.39204e+07 0.00358075 1.21855e+07 8.88989e+06 1.22652e+07 127 1.22761e+07 8.67436e+06 0.00299199 1.22731e+07 49.9939 0.00894125 0.994913 0 50.1629 GTEX-1B933-2126-SM-7MGXR 1 B1 2 pieces, typical post-menopausal involutional changes; few small (1-2mm) serous cysts 5.6 Ovary Ovary 0000992 762 568 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.985677 151512 0.967784 0.987684 0.766823 22724 1 76 0.00275862 145 0 6.83023e+07 0.0319715 272589 6.9154e+07 5.53037e+06 22754 3.40036e+07 0 0.200961 0.987684 0.757378 6.83023e+07 0.00363313 1.48785e+07 9.22660e+06 1.49686e+07 147 1.49794e+07 1.28528e+07 0.00319498 1.50031e+07 50.0396 0.00394177 0.989691 0 50.1509 GTEX-1B933-2426-SM-7DHMD 0 B1 6 pieces, squamous epithelium is ~50 microns. Adherent dermal fat up to ~1.5mm, rep delineated 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 771 559 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.9894 148234 0.975988 0.99071 0.790613 23665 1 76 0.00375943 159 0 7.13057e+07 0.0237135 168033 7.19743e+07 5.99539e+06 23693 3.54669e+07 0 0.185375 0.99071 0.783268 7.13057e+07 0.00571739 1.57204e+07 8.31278e+06 1.57935e+07 149 1.58572e+07 1.31268e+07 0.00473711 1.57457e+07 49.8236 0.00233462 0.99202 0 50.116 GTEX-1B933-2526-SM-7IGO5 1 B1 2 pieces, mainly fibroadipose stroma; trace atrophic ductal elements, rep. encircled 6 Breast Breast - Mammary Tissue 0008367 772 558 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994364 205399 0.979156 0.994538 0.800036 23168 1 76 0.00206489 169 0 7.54829e+07 0.0205241 675579 7.58975e+07 2.90469e+06 23197 3.76219e+07 0 0.17912 0.994538 0.795666 7.54829e+07 0.00239939 1.67168e+07 6.87761e+06 1.69673e+07 191 1.69771e+07 1.20763e+07 0.00223211 1.67262e+07 49.6278 0.00890121 0.994712 0 50.3718 GTEX-1B933-2926-SM-731FO 1 B1 2 pieces, adenohypophysis 7.3 Pituitary Pituitary 0000007 827 503 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.99013 474618 0.959674 0.992679 0.761517 24167 1 76 0.00306462 126 0 6.46289e+07 0.0400531 171945 6.51056e+07 7.32496e+06 24198 3.21149e+07 0 0.198156 0.992679 0.755942 6.46289e+07 0.00385515 1.34648e+07 8.04395e+06 1.34537e+07 136 1.35778e+07 1.14084e+07 0.00345887 1.34888e+07 49.8357 0.00264102 0.995227 0 49.9793 GTEX-1B933-3026-SM-731DB 1 B1 2 pieces, no abnormalities 7.4 Brain Brain - Cerebellum 0002037 828 502 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.987888 596125 0.949096 0.990629 0.715799 22834 1 76 0.00334348 120 0 6.06299e+07 0.0504759 574264 6.12034e+07 6.67464e+06 22855 3.00813e+07 0 0.233297 0.990629 0.709092 6.06299e+07 0.00426053 1.31705e+07 8.05096e+06 1.31382e+07 131 1.33097e+07 8.28330e+06 0.00380074 1.31491e+07 49.6966 0.00938288 0.99337 0 49.9387 GTEX-1B933-3126-SM-7P8RL 1 B1 2 pieces, no abnormalities 7.1 Brain Brain - Cortex 0001870 829 501 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.939051 378714 0.968754 0.96725 0.854392 24097 1 76 0.00433684 198 0 8.4793e+07 0.0307737 2.84118e+06 8.7664e+07 1.36082e+07 24113 4.10325e+07 0 0.114362 0.96725 0.82641 8.4793e+07 0.00822992 1.82999e+07 1.26555e+07 1.80813e+07 249 1.93315e+07 1.13629e+07 0.00622664 1.93371e+07 50.0073 0.0324099 0.995448 0 49.6996 GTEX-1B97I-0004-SM-7J39N B1 Blood Whole Blood 0013756 -101 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B97I-0004-SM-7MD4K B1 Blood Whole Blood 0013756 -101 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B97I-0005-SM-7PC1M B1 8.9 Blood Whole Blood 0013756 -101 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.972362 375574 0.978099 0.975331 0.821754 18482 1 76 0.00332589 100 0 7.88637e+07 0.0208908 124588 8.08584e+07 1.22293e+07 18488 3.91698e+07 0 0.156344 0.975331 0.801483 7.88637e+07 0.00533997 1.84977e+07 1.10091e+08 1.8448e+07 129 1.85339e+07 2.11354e+07 0.00432987 1.86559e+07 50.1641 0.00154082 0.9783 0 49.9327 GTEX-1B97I-0008-SM-EXOHX B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 -490 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991286 558617 0.983174 0.993363 0.863362 21829 1 76 0.00164741 296 0 1.30827e+08 0.016487 232811 1.31701e+08 7.42171e+06 21855 6.51274e+07 0 0.119812 0.993363 0.857632 1.30827e+08 0.00287519 2.94859e+07 1.09271e+07 2.96567e+07 329 2.97702e+07 3.45395e+07 0.00226002 2.96258e+07 49.8784 0.00176772 0.995441 0 50.1444 GTEX-1B97I-0126-SM-731DH 1 B1 2 pieces, no abnormalities 6.3 Spleen Spleen 0002106 44 1320 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6196,LCSET-6684 01/21/2015 TruSeq.v1 RNASEQ 0.991611 480589 0.964253 0.993122 0.777076 25930 1 76 0.00273136 374 0 1.24041e+08 0.0353519 991954 1.249e+08 1.14952e+07 25988 6.17345e+07 0 0.187177 0.993122 0.771731 1.24041e+08 0.00338386 2.71908e+07 1.65761e+07 2.74615e+07 377 2.74475e+07 1.8651e+07 0.00305711 2.73871e+07 49.9449 0.00794198 0.994632 0 50.2477 GTEX-1B97I-0226-SM-73KVO 1 B1 2 pieces, pronounced emphysematous changes 8.6 Lung Lung 0008952 643 721 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992453 332908 0.975976 0.993468 0.808016 24519 1 76 0.0041341 279 0 1.0175e+08 0.0235799 315208 1.02418e+08 4.47697e+06 24556 5.06633e+07 0 0.16796 0.993468 0.802739 1.0175e+08 0.00406306 2.25521e+07 8.51799e+06 2.28298e+07 268 2.28666e+07 1.91569e+07 0.00409862 2.26181e+07 49.7268 0.00307765 0.994483 0 50.3059 GTEX-1B97I-0326-SM-7DUGB 1 B1 2 pieces, no abnormalities 7.4 Thyroid Thyroid 0002046 660 704 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992933 310630 0.970687 0.993926 0.775847 24144 1 76 0.00270233 171 0 8.73597e+07 0.0289724 137160 8.78935e+07 7.59004e+06 24175 4.35114e+07 0 0.19484 0.993926 0.771135 8.73597e+07 0.00414921 1.92407e+07 7.78106e+06 1.93379e+07 188 1.93998e+07 1.60688e+07 0.00342505 1.92599e+07 49.8191 0.00156052 0.99492 0 50.126 GTEX-1B97I-0426-SM-79OL7 1 B1 2 pieces, fibroadipose elements only 7 Breast Breast - Mammary Tissue 0008367 663 701 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980283 195678 0.967354 0.983708 0.754481 23982 1 76 0.00458785 124 0 5.71465e+07 0.0323499 166185 5.8093e+07 1.20801e+07 24007 2.84291e+07 0 0.212873 0.983708 0.742189 5.71465e+07 0.00572491 1.2521e+07 5.64709e+06 1.25597e+07 118 1.26414e+07 9.45785e+06 0.0051544 1.26233e+07 49.964 0.00286067 0.987133 0 50.0772 GTEX-1B97I-0526-SM-73KXE 1 B1 2 pieces, 5% fascia/vascular elements, rep delineated 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 669 695 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993827 322219 0.977275 0.995034 0.823112 22410 1 76 0.00252228 167 0 7.33098e+07 0.0224428 330882 7.36757e+07 7.06762e+06 22429 3.65304e+07 0 0.154164 0.995034 0.819024 7.33098e+07 0.00309253 1.6174e+07 6.84955e+06 1.62621e+07 186 1.63021e+07 1.23305e+07 0.00280706 1.62199e+07 49.8736 0.00449106 0.99624 0 50.1358 GTEX-1B97I-0626-SM-73KUZ 0 B1 6 pieces, minimal dermal fat, squamous epithelium, ~60 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 678 686 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989584 401392 0.971516 0.990945 0.747741 24074 1 76 0.00407408 220 0 9.42721e+07 0.028281 581858 9.51336e+07 4.52714e+06 24115 4.68974e+07 0 0.223775 0.990945 0.74097 9.42721e+07 0.00441118 2.08044e+07 1.23598e+07 2.10075e+07 207 2.10403e+07 1.42892e+07 0.0042424 2.09006e+07 49.8334 0.00611622 0.992306 0 50.2429 GTEX-1B97I-0826-SM-731DN 2 B1 2 pieces, glandular elements with moderate autolysis 6.6 Prostate Prostate 0002367 690 674 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990524 348901 0.963679 0.992369 0.742102 24653 1 76 0.00340139 122 0 5.76349e+07 0.036084 190401 5.80781e+07 6.75951e+06 24687 2.86556e+07 0 0.221577 0.992369 0.736439 5.76349e+07 0.00403503 1.26856e+07 6.47204e+06 1.27045e+07 125 1.27735e+07 9.10499e+06 0.00371762 1.27213e+07 49.8976 0.00327836 0.994215 0 50.0372 GTEX-1B97I-0926-SM-731DZ 1 B1 6 pieces, squamous mucosa beginning to slough, approaching score 2. Submucosal mucus glands present, rep. delineated 8.5 Esophagus Esophagus - Mucosa 0006920 701 663 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.992102 255398 0.974513 0.993889 0.822233 21450 1 76 0.00325672 126 0 5.26664e+07 0.0252236 144556 5.29902e+07 6.12617e+06 21463 2.62136e+07 0 0.15228 0.993889 0.817208 5.26664e+07 0.00386151 1.18201e+07 5.95584e+06 1.18163e+07 117 1.1876e+07 1.06747e+07 0.00355857 1.18515e+07 49.9484 0.00272797 0.995676 0 49.992 GTEX-1B97I-1026-SM-73KVC 1 B1 6 pieces, few foci of squamous mucosa, confiremd target muscularis. Rep. mucos glands delineated 7 Esophagus Esophagus - Muscularis 0004648 701 663 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990518 310095 0.970124 0.991346 0.764532 25207 1 76 0.00405248 277 0 1.18065e+08 0.0296318 528213 1.19096e+08 5.89224e+06 25258 5.87336e+07 0 0.205592 0.991346 0.757915 1.18065e+08 0.00420587 2.54984e+07 9.90297e+06 2.56648e+07 318 2.5674e+07 1.84353e+07 0.00412911 2.55886e+07 49.9167 0.00443519 0.992173 0 50.1625 GTEX-1B97I-1226-SM-7MGWQ 2 B1 6 pieces, mucosa up to ~0.7mm, moderate-severe autolysis 5.6 Stomach Stomach 0000945 712 652 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.98639 150170 0.981676 0.98895 0.870857 21590 1 76 0.00232852 274 0 6.63215e+07 0.0180829 916071 6.70625e+07 5.35185e+06 21604 3.30146e+07 0 0.110819 0.98895 0.861234 6.63215e+07 0.00355989 1.53492e+07 6.59409e+07 1.54588e+07 197 1.55169e+07 1.71483e+07 0.00294261 1.54544e+07 49.8991 0.01366 0.991509 0 50.1778 GTEX-1B97I-1526-SM-73KUK 1 B1 6 pieces, trace autolyzed mucosa, rep delineated, confiremd target muscularis 6.8 Colon Colon - Sigmoid 0001159 728 636 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989372 284664 0.975048 0.98998 0.796335 24568 1 76 0.00401301 280 0 1.1068e+08 0.0246577 541749 1.118e+08 5.81919e+06 24606 5.50407e+07 0 0.178713 0.98998 0.788355 1.1068e+08 0.00418337 2.41741e+07 9.42356e+06 2.42943e+07 317 2.43459e+07 1.81656e+07 0.00409814 2.41925e+07 49.842 0.00484568 0.990588 0 50.1241 GTEX-1B97I-1626-SM-73KYO 0 B1 6 pieces, squamous epithelium up to ~40 microns; no dermal fat 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 824 540 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993513 262311 0.973082 0.994732 0.798635 22610 1 76 0.00255804 228 0 7.68363e+07 0.026615 295794 7.72432e+07 7.63528e+06 22635 3.82842e+07 0 0.174446 0.994732 0.794428 7.68363e+07 0.0032193 1.68049e+07 8.59432e+06 1.67876e+07 178 1.68181e+07 1.40855e+07 0.00288826 1.68692e+07 50.0758 0.00382939 0.995952 0 49.9743 GTEX-1B97I-1726-SM-7939V 0 B1 2 pieces, < 5% fascia 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 944 420 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992085 207900 0.977084 0.993099 0.80967 21749 1 76 0.00223063 136 0 5.68401e+07 0.022543 368268 5.72351e+07 5.24294e+06 21770 2.82628e+07 0 0.167414 0.993099 0.804082 5.68401e+07 0.00290742 1.25931e+07 5.15097e+06 1.25992e+07 143 1.26841e+07 9.92826e+06 0.00256868 1.25656e+07 49.7655 0.0064343 0.994112 0 50.0121 GTEX-1B97I-1826-SM-7939W 0 B1 2 pieces, trace nubbins of fat, ~0.5mm, rep delineated 5.6 Nerve Nerve - Tibial 0001323 946 418 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991812 282152 0.966162 0.99247 0.730296 22995 1 76 0.00240633 155 0 5.83848e+07 0.0335389 170806 5.88277e+07 5.5954e+06 23031 2.90051e+07 0 0.235866 0.99247 0.724797 5.83848e+07 0.00297338 1.29021e+07 5.29551e+06 1.28626e+07 135 1.29737e+07 8.88444e+06 0.00268966 1.2833e+07 49.7274 0.00290349 0.993129 0 49.9235 GTEX-1B97I-1926-SM-7DUGC 0 B1 2 pieces, trace adherent fibrous tissue, delineated 7.4 Blood Vessel Artery - Tibial 0007610 948 416 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992115 302958 0.976766 0.992857 0.840445 21916 1 76 0.00260171 214 0 9.70592e+07 0.0227281 267123 9.77575e+07 8.67086e+06 21938 4.83183e+07 0 0.136321 0.992857 0.834442 9.70592e+07 0.00404248 2.09373e+07 7.13508e+06 2.10725e+07 252 2.109e+07 1.97234e+07 0.00332155 2.09949e+07 49.887 0.00273251 0.993599 0 50.1609 GTEX-1B97I-2026-SM-7DHN2 0 B1 2 pieces, trace interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 949 415 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992098 123926 0.981575 0.993356 0.879368 20138 1 76 0.00318473 163 0 7.86967e+07 0.0181768 514697 7.92231e+07 6.0252e+06 20145 3.92032e+07 0 0.102207 0.993356 0.873525 7.86967e+07 0.00487454 1.72463e+07 6.91653e+06 1.75564e+07 191 1.75764e+07 1.64839e+07 0.00402856 1.73108e+07 49.6194 0.00649681 0.994614 0 50.4455 GTEX-1B97J-0003-SM-7J39S B1 Blood Whole Blood 0013756 -269 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6780,LCSET-7187 05/08/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B97J-0003-SM-7MD4P B1 Blood Whole Blood 0013756 -269 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B97J-0005-SM-7MXT5 B1 6.5 Blood Whole Blood 0013756 -269 BP-54158 RNA isolation_PAXgene Blood RNA (Manual) 06/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.954982 496876 0.971338 0.964193 0.816271 17490 1 76 0.00320987 107 0 7.89025e+07 0.027781 208686 8.18326e+07 1.4375e+07 17495 3.89948e+07 0 0.155068 0.964193 0.787043 7.89025e+07 0.0047352 1.80578e+07 1.11087e+08 1.81648e+07 132 1.84392e+07 2.053e+07 0.00396525 1.85268e+07 50.1185 0.00255016 0.973405 0 50.1477 GTEX-1B97J-0226-SM-79392 1 B1 2 pieces myometrium; features of leiomyoma 8.7 Uterus Uterus 0000995 203 633 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994638 428077 0.97599 0.995093 0.823548 20783 1 76 0.00177184 131 0 5.52395e+07 0.0236391 135453 5.55118e+07 2.63062e+06 20796 2.74958e+07 0 0.152442 0.995093 0.819507 5.52395e+07 0.00228911 1.20777e+07 3.70748e+06 1.20725e+07 132 1.21458e+07 1.05091e+07 0.00203036 1.20324e+07 49.7654 0.00244007 0.995549 0 49.9891 GTEX-1B97J-0326-SM-7939H 1 B1 2 pieces, no abnormalities 8.7 Heart Heart - Atrial Appendage 0006631 206 630 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995775 195330 0.982031 0.996543 0.867959 19131 1 76 0.00172599 119 0 5.26182e+07 0.0176867 756847 5.28007e+07 2.25834e+06 19138 2.6233e+07 0 0.114072 0.996543 0.864959 5.26182e+07 0.0021352 1.12633e+07 6.81676e+06 1.14037e+07 141 1.13905e+07 8.52655e+06 0.00193044 1.13054e+07 49.8127 0.014334 0.997311 0 50.3098 GTEX-1B97J-0426-SM-79OLQ 1 B1 2 pieces, mainly adipose tissue; trace ductal elements with focal apocrine metaplasia (dleineated) 7.1 Breast Breast - Mammary Tissue 0008367 211 625 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977217 187009 0.970925 0.981069 0.759749 23605 1 76 0.00510551 119 0 5.79626e+07 0.0287254 338672 5.9081e+07 1.34355e+07 23633 2.88341e+07 0 0.211175 0.981069 0.745366 5.79626e+07 0.00634115 1.27453e+07 5.9407e+06 1.28151e+07 122 1.28775e+07 8.71759e+06 0.00572091 1.28933e+07 50.0307 0.00573233 0.984921 0 50.1365 GTEX-1B97J-0526-SM-793C2 1 B1 6 pieces, adherent serosa/fascia up to ~1.5mm 7.9 Blood Vessel Artery - Aorta 0001496 211 625 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993805 358299 0.975639 0.995141 0.818345 22239 1 76 0.00286639 149 0 6.98556e+07 0.0240447 318248 7.01967e+07 9.76027e+06 22266 3.4798e+07 0 0.157294 0.995141 0.814369 6.98556e+07 0.00362127 1.54093e+07 5.85139e+06 1.5428e+07 160 1.54627e+07 1.26782e+07 0.00324332 1.54639e+07 50.0019 0.00453366 0.996477 0 50.0303 GTEX-1B97J-0626-SM-7P8RU 1 B1 2 pieces, no abnormalities 7.2 Thyroid Thyroid 0002046 212 624 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.948903 262607 0.964442 0.971901 0.76757 24687 1 76 0.00448742 135 0 7.82994e+07 0.0352525 246804 8.05631e+07 1.2099e+07 24720 3.8112e+07 0 0.196872 0.971901 0.746002 7.82994e+07 0.00738444 1.66453e+07 8.77146e+06 1.67801e+07 151 1.77005e+07 1.28161e+07 0.00590165 1.74674e+07 49.6685 0.00306349 0.994899 0 50.2017 GTEX-1B97J-0726-SM-7RHG3 1 B1 2 pieces, mild-moderate ischemic changes/fibrosis, microinfarct encircled 8 Heart Heart - Left Ventricle 0006566 215 621 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992671 144140 0.985623 0.994728 0.865123 20560 1 76 0.00234071 268 0 9.3444e+07 0.0141062 1.8356e+06 9.39392e+07 9.01903e+06 20576 4.65511e+07 0 0.1205 0.994728 0.860562 9.3444e+07 0.00357452 2.02968e+07 1.96395e+07 2.0515e+07 270 2.05345e+07 1.51615e+07 0.00295634 2.04359e+07 49.8797 0.0195402 0.996785 0 50.2674 GTEX-1B97J-0826-SM-7SB78 1 B1 2 pieces, 60% occlusive atherosis (delineated) prominent rims or nubbins of adherent fat up to ~1.5mm, both sections 6.2 Blood Vessel Artery - Coronary 0001621 216 620 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.992321 220020 0.966022 0.994314 0.738839 24855 1 76 0.00259504 167 0 8.48071e+07 0.0336654 532947 8.52921e+07 9.17272e+06 24896 4.22243e+07 0 0.227182 0.994314 0.734638 8.48071e+07 0.00378503 1.85384e+07 1.01529e+07 1.87991e+07 189 1.87883e+07 1.27113e+07 0.00318884 1.87119e+07 49.8981 0.00624849 0.996306 0 50.3492 GTEX-1B97J-0926-SM-79ONU 1 B1 6 pieces, confirmed target muscularis, nubbins of adherent fat/fascia up to ~1.5mm 6.7 Esophagus Esophagus - Muscularis 0004648 217 619 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993453 170899 0.977469 0.993596 0.842722 21113 1 76 0.00298551 155 0 6.56778e+07 0.0221786 412067 6.61011e+07 3.95353e+06 21129 3.27255e+07 0 0.134747 0.993596 0.837325 6.56778e+07 0.00420743 1.42418e+07 4.98787e+06 1.4352e+07 152 1.43445e+07 1.22049e+07 0.00359638 1.42562e+07 49.8457 0.00623389 0.993738 0 50.1926 GTEX-1B97J-1026-SM-7MXTE 1 B1 6 pieces, mucosa up to ~0.3mm, 15-20% thickness 9 Esophagus Esophagus - Mucosa 0006920 221 615 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.983834 116030 0.978056 0.98985 0.844772 22029 1 76 0.00267457 172 0 7.20919e+07 0.0215358 294482 7.28311e+07 9.24241e+06 22041 3.57709e+07 0 0.133283 0.98985 0.836198 7.20919e+07 0.00361813 1.61316e+07 9.40279e+06 1.61614e+07 167 1.6328e+07 1.48517e+07 0.00314348 1.63808e+07 50.0806 0.00404335 0.995866 0 50.0461 GTEX-1B97J-1126-SM-7SB79 1 B1 2 pieces, fascia/vasular elements up to ~10% tissue, rep delineated 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 222 614 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991949 190507 0.967656 0.99387 0.759146 23941 1 76 0.00262628 203 0 8.51494e+07 0.0320847 856888 8.56746e+07 9.61404e+06 23978 4.24051e+07 0 0.20851 0.99387 0.754492 8.51494e+07 0.00381059 1.86318e+07 9.79747e+06 1.89288e+07 207 1.8917e+07 1.22167e+07 0.00321729 1.87979e+07 49.842 0.0100017 0.99579 0 50.3954 GTEX-1B97J-1226-SM-7PBZR 0 B1 6 pieces, skeletal muscle; apparent switch with -1425 7.8 Muscle Muscle - Skeletal 0011907 239 597 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.990447 181071 0.98513 0.993601 0.875221 20310 1 76 0.0026488 290 0 1.23232e+08 0.0146298 1.97921e+06 1.24025e+08 1.654e+07 20324 6.13225e+07 0 0.109909 0.993601 0.86962 1.23232e+08 0.00423535 2.66458e+07 2.09069e+07 2.69616e+07 318 2.69655e+07 2.34424e+07 0.00343956 2.69756e+07 50.0094 0.0159581 0.996755 0 50.2945 GTEX-1B97J-1326-SM-7PC2G 0 B1 2 pieces, trace adherent fat 6.1 Nerve Nerve - Tibial 0001323 236 600 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987359 476896 0.967649 0.990848 0.772797 25165 1 76 0.00328332 285 0 1.06354e+08 0.0321086 471196 1.07337e+08 1.65234e+07 25213 5.27941e+07 0 0.194852 0.990848 0.765725 1.06354e+08 0.00506681 2.32571e+07 9.80751e+06 2.34562e+07 318 2.35834e+07 1.55847e+07 0.00417192 2.34841e+07 49.8944 0.00438989 0.994337 0 50.2131 GTEX-1B97J-1426-SM-79OLR 1 B1 6 pieces, bilayered smooth muscle, apparent switch with -1225 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 244 592 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.979777 217995 0.973667 0.983578 0.812613 21223 1 76 0.00482279 140 0 6.12384e+07 0.0260984 548023 6.22608e+07 1.40328e+07 21240 3.04592e+07 0 0.161053 0.983578 0.799269 6.12384e+07 0.00609217 1.3236e+07 6.15661e+06 1.33522e+07 140 1.3405e+07 9.48162e+06 0.00545503 1.33961e+07 49.9834 0.00880205 0.98738 0 50.2184 GTEX-1B97J-1526-SM-79ONI 1 B1 2 pieces, well fixed Islets, rep encircled 6.7 Pancreas Pancreas 0001150 241 595 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.994093 114231 0.979355 0.994454 0.849624 21042 1 76 0.00311254 94 0 6.31449e+07 0.02038 188896 6.3497e+07 3.59245e+06 21055 3.14814e+07 0 0.129731 0.994454 0.844912 6.31449e+07 0.00443868 1.4519e+07 1.6557e+07 1.47134e+07 103 1.46688e+07 1.82694e+07 0.00377537 1.45873e+07 49.8608 0.00297488 0.994815 0 50.3325 GTEX-1B97J-1726-SM-7MGWP 0 B1 2 pieces small muscular artery, adherent fibrous tissue, smaller vessel up to ~0.4mm 5.6 Blood Vessel Artery - Tibial 0007610 242 594 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.987892 162172 0.978218 0.98986 0.875088 21513 1 76 0.00247856 278 0 1.03889e+08 0.021377 547465 1.04953e+08 8.48309e+06 21532 5.17449e+07 0 0.10313 0.98986 0.866215 1.03889e+08 0.00323718 2.21655e+07 7.12578e+06 2.23785e+07 327 2.23261e+07 2.1271e+07 0.00285711 2.24101e+07 50.0939 0.00521628 0.991829 0 50.239 GTEX-1B97J-1826-SM-7IGPP 1 B1 6 pieces, mucosa well fixed, up to 1.2mm, 40-50% thickness 5.8 Stomach Stomach 0000945 243 593 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993549 148501 0.978613 0.993857 0.834936 21394 1 76 0.00187028 238 0 6.8176e+07 0.0211105 686602 6.85974e+07 2.14785e+06 21411 3.40018e+07 0 0.143677 0.993857 0.829807 6.8176e+07 0.00226848 1.54032e+07 3.55134e+07 1.56625e+07 188 1.56115e+07 1.38297e+07 0.00206932 1.54726e+07 49.7766 0.0100092 0.994165 0 50.4174 GTEX-1B97J-1926-SM-7IGQB 1 B1 2 pieces, no abnormalities 5.9 Spleen Spleen 0002106 246 590 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994626 197635 0.966047 0.994826 0.801402 22687 1 76 0.00239447 131 0 6.09568e+07 0.0326287 327933 6.12739e+07 2.18892e+06 22705 3.0359e+07 0 0.164645 0.994826 0.797256 6.09568e+07 0.00264113 1.3455e+07 8.66683e+06 1.35618e+07 141 1.35431e+07 1.0448e+07 0.00251778 1.34859e+07 49.8941 0.00535192 0.995026 0 50.1977 GTEX-1B97J-2126-SM-79OL6 1 B1 1 piece glandular element is ~90% tissue; adherent nubbin of fat is remainder (delineated). 7.2 Salivary Gland Minor Salivary Gland 0006330 251 585 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973252 191530 0.979433 0.976968 0.859435 21980 1 76 0.00553989 186 0 5.68859e+07 0.0193863 145781 5.82269e+07 1.39425e+07 21993 2.8273e+07 0 0.119997 0.976968 0.839641 5.68859e+07 0.00669427 1.28891e+07 1.41974e+07 1.30394e+07 136 1.31405e+07 1.12331e+07 0.00611488 1.2993e+07 49.7178 0.00250367 0.980685 0 50.2898 GTEX-1B98T-0004-SM-7J38T B1 Blood Whole Blood 0013756 654 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6780,LCSET-7006 03/30/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1B98T-0004-SM-7MA63 B1 Blood Whole Blood 0013756 654 BP-54164,BP-54167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B98T-0526-SM-7EPHN 0 B1 2 pieces, adherent fat (rep delineated/pascinian corpuscle (ensquared) are ~40% of tissue 6.8 Blood Vessel Artery - Tibial 0007610 847 558 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 EXCLUDE 0.989302 201826 0.970905 0.991602 0.782614 22585 1 76 0.003166 130 0 8.26103e+07 0.0287302 470456 8.33099e+07 1.06893e+07 22620 4.11032e+07 0 0.188291 0.991602 0.776042 8.26103e+07 0.011807 1.78092e+07 7.18921e+06 1.7947e+07 143 1.79748e+07 1.42786e+07 0.00747648 1.79568e+07 49.9748 0.00564706 0.993902 0 50.1926 GTEX-1B98T-0626-SM-731FN 1 B1 2 pieces, no abnormalities 6.4 Testis Testis 0000473 870 535 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 EXCLUDE 0.987497 559401 0.905277 0.990311 0.673155 32134 1 76 0.00312894 137 0 6.15551e+07 0.0944233 529060 6.21574e+07 7.37788e+06 32190 3.05723e+07 0 0.232122 0.990311 0.666632 6.15551e+07 0.00397268 1.25522e+07 9.81487e+06 1.25117e+07 120 1.26436e+07 9.45396e+06 0.00354961 1.25669e+07 49.8479 0.00851162 0.993125 0 49.9192 GTEX-1B98T-0726-SM-7939J 1 B1 2 pieces, gynecomastoid stromal and ductal (rep encircled) hyperplasia 6.3 Breast Breast - Mammary Tissue 0008367 871 534 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 EXCLUDE 0.992375 199054 0.977193 0.99329 0.7841 22642 1 76 0.0023662 139 0 5.91874e+07 0.0224865 237666 5.95872e+07 4.97426e+06 22674 2.94406e+07 0 0.193093 0.99329 0.778839 5.91874e+07 0.00301569 1.31336e+07 5.83386e+06 1.31384e+07 140 1.32165e+07 1.04267e+07 0.00269064 1.31116e+07 49.8008 0.00398854 0.994206 0 50.0091 GTEX-1B98T-0826-SM-7DHME 0 B1 6 pieces, no dermal fat; squamous epithelium is ~30 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 874 531 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 EXCLUDE 0.989542 140150 0.975093 0.990736 0.771067 24061 1 76 0.00369332 168 0 7.36596e+07 0.0246179 241059 7.43484e+07 5.69053e+06 24093 3.66454e+07 0 0.204027 0.990736 0.763923 7.36596e+07 0.00549425 1.62496e+07 6.75184e+06 1.6345e+07 154 1.63964e+07 1.28701e+07 0.0045927 1.62809e+07 49.8233 0.00324229 0.99193 0 50.1463 GTEX-1B98T-0926-SM-79ONY 1 B1 2 pieces, no significant abnormalities 6.5 Thyroid Thyroid 0002046 881 524 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 EXCLUDE 0.990285 245197 0.967237 0.990598 0.745039 25274 1 76 0.00295742 203 0 9.40249e+07 0.0324762 333455 9.49174e+07 7.45061e+06 25322 4.67997e+07 0 0.222198 0.990598 0.738033 9.40249e+07 0.00393531 2.0664e+07 8.78256e+06 2.07136e+07 213 2.07414e+07 1.46778e+07 0.00344621 2.06715e+07 49.9157 0.00351311 0.99091 0 50.0599 GTEX-1B98T-1026-SM-79OL8 1 B1 2 pieces, glandular elements are ~40% of tissue (delineated) rest is stroma/skeletal muscle 7 Salivary Gland Minor Salivary Gland 0006330 885 520 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 EXCLUDE 0.977814 227354 0.964456 0.981539 0.723348 23304 1 76 0.00489566 115 0 6.43055e+07 0.0353056 483592 6.5515e+07 1.46334e+07 23344 3.19704e+07 0 0.241107 0.981539 0.709995 6.43055e+07 0.00606879 1.36807e+07 7.24659e+06 1.37682e+07 124 1.38628e+07 9.05826e+06 0.00548 1.38046e+07 49.8948 0.0073814 0.985264 0 50.1594 GTEX-1B98T-1126-SM-7EPHO 1 B1 2 pieces, moderate passive congestion 6.8 Liver Liver 0001114 888 517 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 EXCLUDE 0.990514 337527 0.974883 0.992963 0.799451 22046 1 76 0.00324404 116 0 8.39101e+07 0.0249356 1.19722e+06 8.45048e+07 1.13249e+07 22071 4.17683e+07 0 0.175431 0.992963 0.793826 8.39101e+07 0.0116419 1.81794e+07 1.20726e+07 1.85105e+07 143 1.85501e+07 1.36089e+07 0.00743261 1.8322e+07 49.6908 0.0141675 0.995413 0 50.4513 GTEX-1B98T-1326-SM-7EPI7 1 B1 2 pieces, no abnormalities 6.9 Heart Heart - Atrial Appendage 0006631 893 512 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6443 01/28/2015 TruSeq.v1 EXCLUDE 0.992127 146435 0.974971 0.994314 0.805388 23172 1 76 0.00318619 125 0 8.75059e+07 0.024811 2.40722e+06 8.80063e+07 1.13471e+07 23203 4.36084e+07 0 0.169582 0.994314 0.800809 8.75059e+07 0.011564 1.87598e+07 9.63803e+06 1.89638e+07 154 1.90003e+07 1.32432e+07 0.00736589 1.88924e+07 49.8576 0.0273528 0.996501 0 50.2703 GTEX-1B98T-1726-SM-731FB 1 B1 6 pieces, squamous mucosa up to ~0.25mm, submucosal mucus glands present, rep delineated. Superficial early sloughing. 6.2 Esophagus Esophagus - Mucosa 0006920 911 494 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 EXCLUDE 0.991045 261876 0.976666 0.992667 0.850329 21818 1 76 0.00353926 157 0 7.65182e+07 0.0230987 1.24345e+06 7.70835e+07 8.91533e+06 21833 3.80749e+07 0 0.126337 0.992667 0.844093 7.65182e+07 0.00407471 1.71513e+07 8.61333e+06 1.738e+07 202 1.74464e+07 1.1509e+07 0.00380655 1.72031e+07 49.6489 0.0161312 0.994289 0 50.3311 GTEX-1B98T-2126-SM-79OOG 2 B1 2 pieces, moderately advanced saponification; Islets still visible, rep encircled, moderately-severely degraded 6.6 Pancreas Pancreas 0001150 922 483 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.993529 146730 0.979718 0.994135 0.837954 19705 1 76 0.0035991 94 0 5.57635e+07 0.0200096 138045 5.60925e+07 3.17116e+06 19717 2.77892e+07 0 0.141764 0.994135 0.83304 5.57635e+07 0.0049813 1.28734e+07 1.67541e+07 1.30765e+07 103 1.30562e+07 1.7022e+07 0.00428978 1.29294e+07 49.756 0.00246103 0.994742 0 50.3914 GTEX-1B98T-3126-SM-73KV2 1 B1 2 pieces, no abnormalities 5.6 Brain Brain - Cortex 0001870 996 409 BP-55787 RNA Extraction from Paxgene-derived Lysate Plate Based 08/07/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.990008 1.23689e+06 0.938317 0.991344 0.78524 22744 1 76 0.00462813 265 0 9.79546e+07 0.0614933 7.9002e+06 9.88099e+07 4.53408e+06 22759 4.87561e+07 0 0.153077 0.991344 0.778443 9.79546e+07 0.00496258 2.01627e+07 7.12152e+07 2.12283e+07 328 2.08237e+07 6.97064e+06 0.00479513 2.07e+07 49.8511 0.0799535 0.992679 0 51.2873 GTEX-1B996-0003-SM-7J38R B1 Blood Whole Blood 0013756 841 BP-54199 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1B996-0003-SM-7MA64 B1 Blood Whole Blood 0013756 841 BP-54199 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1B996-0006-SM-7P8OS B1 7.8 Blood Whole Blood 0013756 841 BP-54198 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.971502 764475 0.969578 0.973641 0.775968 19054 1 76 0.00272373 198 0 1.14121e+08 0.0292374 299286 1.1721e+08 1.36337e+07 19070 5.67533e+07 0 0.193609 0.973641 0.755514 1.14121e+08 0.0047859 2.62943e+07 1.58264e+08 2.63207e+07 247 2.64042e+07 2.72414e+07 0.00375255 2.64658e+07 50.0583 0.00255341 0.975779 0 50.0251 GTEX-1B996-0008-SM-EXOHY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1032 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.992249 205630 0.982446 0.994022 0.86508 19282 1 76 0.00168193 153 0 6.58116e+07 0.0172637 123443 6.62074e+07 3.50794e+06 19293 3.27855e+07 0 0.117366 0.994022 0.859908 6.58116e+07 0.00261936 1.48029e+07 5.86484e+06 1.48893e+07 144 1.49144e+07 1.73095e+07 0.00214981 1.48867e+07 49.9536 0.00186449 0.995795 0 50.1456 GTEX-1B996-0011-R10b-SM-CJI3T B1, A1 8.3 Brain Brain - Frontal Cortex (BA9) 0009834 890 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990983 950904 0.958456 0.992657 0.836912 23961 1 76 0.00203406 266 0 8.03054e+07 0.0412166 5.59466e+06 8.08995e+07 4.68044e+06 23984 3.99601e+07 0 0.121544 0.992657 0.830766 8.03054e+07 0.00291905 1.75025e+07 1.75045e+07 1.77775e+07 267 1.77358e+07 9.02152e+06 0.0024758 1.76638e+07 49.8982 0.0691557 0.994331 0 50.3897 GTEX-1B996-0011-R11b-SM-7MXTM B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 890 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 EXCLUDE 0.982092 254471 0.939795 0.988501 0.765618 23863 1 76 0.00301608 156 0 7.03833e+07 0.0599479 2.31030e+06 7.12021e+07 8.984e+06 23887 3.48931e+07 0 0.174178 0.988501 0.756814 7.03833e+07 0.00394852 1.49943e+07 1.48329e+07 1.50575e+07 192 1.52053e+07 7.47938e+06 0.00347928 1.5248e+07 50.0701 0.0324471 0.994909 0 50.1053 GTEX-1B996-0011-R1b-SM-7P8PO B1, A1 6.2 Brain Brain - Hippocampus 0001954 890 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987873 394597 0.958365 0.990431 0.830716 24697 1 76 0.00343909 272 0 1.00564e+08 0.0413713 8.02901e+06 1.01536e+08 1.42991e+07 24726 5.00183e+07 0 0.127649 0.990431 0.822766 1.00564e+08 0.00439319 2.179e+07 2.05379e+07 2.24157e+07 308 2.24446e+07 9.20484e+06 0.00391491 2.19706e+07 49.4664 0.0790756 0.992988 0 50.7076 GTEX-1B996-0011-R2a-SM-7IGON B1, A1 5.9 Brain Brain - Substantia nigra 0002038 890 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995482 344679 0.96923 0.995955 0.840812 22504 1 76 0.00200061 198 0 6.76827e+07 0.0304544 4.0262e+06 6.79576e+07 2.24319e+06 22523 3.37379e+07 0 0.128418 0.995955 0.837411 6.76827e+07 0.00235639 1.48494e+07 1.08973e+07 1.52374e+07 207 1.50866e+07 8.09697e+06 0.00217842 1.5023e+07 49.8944 0.0592457 0.996428 0 50.6448 GTEX-1B996-0011-R3b-SM-9QEGY B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 890 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989353 393462 0.96388 0.99272 0.839782 24906 1 76 0.00203241 373 0 9.98937e+07 0.0358272 6.43277e+06 1.00626e+08 5.07208e+06 24929 4.96788e+07 0 0.124098 0.99272 0.833668 9.98937e+07 0.00408558 2.18894e+07 1.69876e+07 2.21223e+07 337 2.21173e+07 1.08501e+07 0.00305551 2.21779e+07 50.0684 0.0639273 0.996087 0 50.2646 GTEX-1B996-0011-R4b-SM-9OSVO B1, A1 7 Brain Brain - Amygdala 0001876 890 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991827 446216 0.961817 0.993861 0.836137 25165 1 76 0.00273354 273 0 1.00108e+08 0.0378813 6.04294e+06 1.00727e+08 9.35356e+06 25193 4.98391e+07 0 0.12568 0.993861 0.831004 1.00108e+08 0.00360269 2.18938e+07 1.65795e+07 2.21374e+07 316 2.20804e+07 1.13179e+07 0.00316722 2.21186e+07 50.0432 0.0599934 0.995896 0 50.2766 GTEX-1B996-0011-R5a-SM-7P8PN B1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 890 BP-57293 RNA isolation_PAXgene Tissue miRNA 10/17/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987955 545529 0.959356 0.990555 0.835067 24549 1 76 0.00332782 273 0 9.51339e+07 0.040402 5.0912e+06 9.6041e+07 1.43775e+07 24575 4.73229e+07 0 0.124289 0.990555 0.82718 9.51339e+07 0.0041136 2.05406e+07 2.27656e+07 2.11991e+07 280 2.12042e+07 1.01407e+07 0.00371968 2.07426e+07 49.4497 0.0530107 0.993156 0 50.7888 GTEX-1B996-0011-R6b-SM-793AQ B1, A1 8.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 890 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993168 512765 0.956564 0.993478 0.805269 23812 1 76 0.00204282 131 0 5.54651e+07 0.0430012 1.40535e+06 5.58292e+07 3.16038e+06 23831 2.75704e+07 0 0.151295 0.993478 0.800016 5.54651e+07 0.00244671 1.22142e+07 7.16114e+06 1.21445e+07 149 1.22586e+07 8.09639e+06 0.0022447 1.21224e+07 49.7208 0.0251723 0.993788 0 49.857 GTEX-1B996-0011-R7b-SM-7IGNT B1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 890 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993445 989887 0.961618 0.994443 0.835107 26205 1 76 0.00208595 382 0 1.5232e+08 0.0381013 5.95615e+06 1.53171e+08 9.48063e+06 26236 7.59333e+07 0 0.126511 0.994443 0.830466 1.5232e+08 0.00276258 3.32482e+07 3.13505e+07 3.37989e+07 367 3.36627e+07 1.97029e+07 0.00242393 3.35198e+07 49.8936 0.0388856 0.995441 0 50.4107 GTEX-1B996-0011-R8b-SM-79OOS B1, A1 6.7 Brain Brain - Hypothalamus 0001898 890 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993419 312940 0.95957 0.993783 0.817929 24032 1 76 0.00321162 132 0 6.18397e+07 0.0400794 1.97659e+06 6.22266e+07 3.46454e+06 24056 3.08077e+07 0 0.141641 0.993783 0.812843 6.18397e+07 0.0043995 1.35616e+07 9.13357e+06 1.36966e+07 158 1.36787e+07 8.0827e+06 0.00380534 1.36003e+07 49.8562 0.0317644 0.994146 0 50.2476 GTEX-1B996-0126-SM-7PBYF 1 B1 2 pieces; ~10% fibrovascular component 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 1032 1388 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986836 206950 0.976457 0.991489 0.814737 23510 1 76 0.00290052 218 0 9.54721e+07 0.0232341 430353 9.62916e+07 1.35664e+07 23541 4.73952e+07 0 0.16172 0.991489 0.807803 9.54721e+07 0.00528104 2.09372e+07 8.45106e+06 2.10918e+07 246 2.12191e+07 1.67689e+07 0.00408519 2.12326e+07 50.0159 0.00446927 0.996142 0 50.1839 GTEX-1B996-0226-SM-7RHGO 0 B1 6 pieces; ~36um thick epidermis; minimal periadnexal fat; numerous empty spaces (fixation related?) 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1032 1388 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991966 144839 0.976128 0.994054 0.802194 23958 1 76 0.00246545 289 0 9.32663e+07 0.0236132 637393 9.38242e+07 9.15218e+06 23993 4.6448e+07 0 0.173934 0.994054 0.797424 9.32663e+07 0.00369315 2.04621e+07 9.58892e+06 2.06384e+07 267 2.06657e+07 1.61569e+07 0.00307801 2.06163e+07 49.9401 0.00679348 0.996142 0 50.2144 GTEX-1B996-0326-SM-7DHMU 0 B1 2 pieces; ~5% internal fat 8.2 Muscle Muscle - Skeletal 0011907 1034 1386 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6441,LCSET-6775 01/31/2015 TruSeq.v1 RNASEQ 0.99463 143982 0.984156 0.995292 0.86876 19491 1 76 0.00220955 200 0 8.84379e+07 0.0156436 887816 8.88562e+07 7.58009e+06 19501 4.41164e+07 0 0.115396 0.995292 0.86467 8.84379e+07 0.00295008 1.91714e+07 8.45033e+06 1.93587e+07 227 1.93169e+07 1.79625e+07 0.00257957 1.92686e+07 49.9375 0.0099916 0.995953 0 50.2431 GTEX-1B996-0426-SM-7EWF8 0 B1 6 pieces; well trimmed 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1035 1385 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99043 166218 0.970479 0.992226 0.772998 23159 1 76 0.00238664 142 0 6.28049e+07 0.0293589 544928 6.3297e+07 5.62796e+06 23183 3.12395e+07 0 0.197481 0.992226 0.766989 6.28049e+07 0.00352825 1.38923e+07 6.85198e+06 1.39606e+07 154 1.39524e+07 8.6615e+06 0.00295641 1.40061e+07 50.0959 0.00860907 0.994023 0 50.1226 GTEX-1B996-0526-SM-79OOE 1 B1 4 pieces; up to ~15% internal/external fat 6.5 Nerve Nerve - Tibial 0001323 1039 1381 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992584 153441 0.96358 0.992296 0.75206 22843 1 76 0.00307393 135 0 5.34371e+07 0.0361572 298895 5.3852e+07 3.08262e+06 22868 2.65967e+07 0 0.21152 0.992296 0.746266 5.34371e+07 0.00428126 1.17254e+07 4.9187e+06 1.1762e+07 123 1.17685e+07 7.97056e+06 0.00367777 1.17056e+07 49.8661 0.00555031 0.992009 0 50.0778 GTEX-1B996-0626-SM-79OJP 1 B1 2 pieces; focal medial calcification (outlined) and evolving plaque; up to 5mm adventitia 7 Blood Vessel Artery - Tibial 0007610 1043 1377 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976639 178579 0.971725 0.980501 0.802881 21854 1 76 0.0049777 147 0 7.15372e+07 0.0279331 370000 7.29599e+07 1.62052e+07 21874 3.55793e+07 0 0.168844 0.980501 0.787226 7.15372e+07 0.00631186 1.53405e+07 6.34519e+06 1.54219e+07 155 1.54799e+07 1.22411e+07 0.00564215 1.55411e+07 50.0986 0.00507128 0.984363 0 50.1323 GTEX-1B996-0726-SM-7IGPI 0 B1 2 pieces; congestion, edema, focal perivascular inflammatory cell infiltrate (outlined) 6 Lung Lung 0008952 1045 1375 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99481 336085 0.973748 0.994972 0.749387 23118 1 76 0.00202201 155 0 7.45957e+07 0.0259345 267512 7.49727e+07 2.80098e+06 23152 3.71678e+07 0 0.224361 0.994972 0.745619 7.45957e+07 0.00244066 1.65152e+07 6.09473e+06 1.66381e+07 171 1.66384e+07 1.17905e+07 0.0022313 1.65309e+07 49.8379 0.00356813 0.995133 0 50.1854 GTEX-1B996-1026-SM-793CF 1 B1 2 pieces; 1 piece is ~30% fibrous/~20% internal fat, 2nd also includes ~20% fat 7.6 Heart Heart - Atrial Appendage 0006631 1056 1364 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99367 364676 0.97991 0.995064 0.822943 20856 1 76 0.00289582 131 0 6.93409e+07 0.0198696 1.94562e+06 6.96849e+07 1.00551e+07 20867 3.45424e+07 0 0.156966 0.995064 0.818881 6.93409e+07 0.00354483 1.47573e+07 9.68332e+06 1.48786e+07 162 1.4903e+07 1.12346e+07 0.00321987 1.48156e+07 49.8529 0.0279203 0.996459 0 50.2047 GTEX-1B996-1126-SM-73KWN 1 B1 2 pieces; perivascular fatty accumulation (rep outlined); patchy increased eosinophilia and fragmentation of fibers (arrows) suggestive of early acute myocardial infarction; interstitial fibrosis with scarring 7.6 Heart Heart - Left Ventricle 0006566 1062 1358 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993537 303738 0.97753 0.994806 0.840589 21449 1 76 0.00259333 198 0 8.00025e+07 0.0223003 2.5084e+06 8.04203e+07 7.49058e+06 21468 3.98744e+07 0 0.13694 0.994806 0.836223 8.00025e+07 0.00314408 1.77375e+07 9.91894e+06 1.79132e+07 234 1.7913e+07 1.11295e+07 0.00286835 1.78218e+07 49.8724 0.0311912 0.996075 0 50.2464 GTEX-1B996-1226-SM-73KWZ 1 B1 2 pieces; mature adipose tissue and small 1.6mm in diameter lymph node (outlined); ~5% fibrovascular component 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1064 1356 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993033 257525 0.972794 0.994131 0.77868 23456 1 76 0.00262362 200 0 8.53139e+07 0.0269279 316966 8.58176e+07 8.09274e+06 23492 4.25026e+07 0 0.194114 0.994131 0.77411 8.53139e+07 0.00315648 1.8727e+07 8.31187e+06 1.87799e+07 208 1.87965e+07 1.33796e+07 0.00288976 1.88029e+07 50.0085 0.00369349 0.99523 0 50.0705 GTEX-1B996-1326-SM-731EO 2 B1 2 pieces; up to ~15% internal fat with conspicuous islets (rep outlined) 7.1 Pancreas Pancreas 0001150 1065 1355 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.988948 416450 0.97792 0.991465 0.836613 20268 1 76 0.00360678 106 0 6.30955e+07 0.0217922 125976 6.36387e+07 7.53161e+06 20279 3.13349e+07 0 0.141307 0.991465 0.829472 6.30955e+07 0.00451866 1.45222e+07 2.17236e+07 1.46919e+07 114 1.47537e+07 1.9766e+07 0.00406156 1.46132e+07 49.7609 0.00197955 0.993982 0 50.2904 GTEX-1B996-1426-SM-7EPIA 1 B1 2 pieces; marked congestion 6.8 Liver Liver 0001114 1067 1353 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990945 280808 0.977869 0.993449 0.821468 21066 1 76 0.00320214 119 0 8.27166e+07 0.0217376 674362 8.3262e+07 1.11493e+07 21086 4.11785e+07 0 0.156401 0.993449 0.816087 8.27166e+07 0.0117204 1.80596e+07 1.17708e+07 1.84043e+07 150 1.84365e+07 1.33474e+07 0.00745055 1.82161e+07 49.6993 0.00809928 0.995953 0 50.4726 GTEX-1B996-1626-SM-7DHLZ 1 B1 6 pieces; well trimmed target muscularis 7.9 Esophagus Esophagus - Muscularis 0004648 1073 1347 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99047 180624 0.973378 0.991496 0.816248 21643 1 76 0.00354977 142 0 6.95908e+07 0.0263401 380285 7.01876e+07 5.60052e+06 21662 3.46162e+07 0 0.15713 0.991496 0.809306 6.95908e+07 0.00530758 1.48199e+07 5.61921e+06 1.50085e+07 151 1.50182e+07 1.26475e+07 0.00442777 1.48751e+07 49.7606 0.00541812 0.992522 0 50.3161 GTEX-1B996-1726-SM-7IGMW 1 B1 6 pieces; target muscularis, few pieces with small amount of attached fat/vessels 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1075 1345 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993276 170189 0.968021 0.994168 0.771357 22221 1 76 0.00207773 123 0 6.00333e+07 0.0317404 340597 6.03854e+07 3.61815e+06 22247 2.99269e+07 0 0.196663 0.994168 0.766859 6.00333e+07 0.00294112 1.28856e+07 5.15412e+06 1.30299e+07 137 1.30038e+07 9.63705e+06 0.00250904 1.29644e+07 49.9241 0.00564038 0.99506 0 50.2784 GTEX-1B996-1826-SM-7MGY6 1 B1 6 pieces; very superficial focal desquamation; ~0.25mm thick squamous epithelium 8.7 Esophagus Esophagus - Mucosa 0006920 1077 1343 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992556 262786 0.970025 0.994107 0.784396 22628 1 76 0.00269443 136 0 7.06484e+07 0.0296959 224724 7.10672e+07 5.28742e+06 22656 3.52034e+07 0 0.185629 0.994107 0.779773 7.06484e+07 0.00314486 1.57756e+07 9.78018e+06 1.58182e+07 156 1.58833e+07 1.29707e+07 0.00291929 1.5815e+07 49.8922 0.00316214 0.995657 0 50.0674 GTEX-1B996-2026-SM-7MKG7 1 B1 2 pieces; mild to moderate autolysis 7.7 Adrenal Gland Adrenal Gland 0002369 1084 1336 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979713 413083 0.971261 0.987351 0.774358 22478 1 76 0.00409256 160 0 8.49721e+07 0.0284534 854173 8.60607e+07 1.39572e+07 22503 4.20203e+07 0 0.196903 0.987351 0.764563 8.49721e+07 0.00499168 1.82558e+07 1.19378e+07 1.85842e+07 191 1.89173e+07 1.41064e+07 0.00453865 1.85227e+07 49.4731 0.00992524 0.994989 0 50.4457 GTEX-1B996-2326-SM-731EC 2 B1 2 pieces; spermatogenesis is present 6.8 Testis Testis 0000473 1092 1328 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.989726 466003 0.927527 0.991391 0.708706 31321 1 76 0.00339815 128 0 5.67655e+07 0.0721659 440003 5.72584e+07 7.00828e+06 31366 2.82129e+07 0 0.21882 0.991391 0.702605 5.67655e+07 0.00387338 1.18873e+07 7.04245e+06 1.18298e+07 116 1.19555e+07 9.16067e+06 0.00363537 1.1844e+07 49.7657 0.00768451 0.993055 0 49.8787 GTEX-1B996-2626-SM-73KZ1 3 B1 6 pieces; moderate to severe mucosal autolysis; few pieces contain small fragments of muscularis (outlined) 6.7 Colon Colon - Transverse 0001157 1105 1315 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.990271 256266 0.967709 0.99146 0.761611 24115 1 76 0.00300553 168 0 8.20695e+07 0.0305967 532687 8.27764e+07 8.13883e+06 24151 4.08104e+07 0 0.206098 0.99146 0.755107 8.20695e+07 0.00358021 1.77571e+07 8.40272e+06 1.781e+07 191 1.7836e+07 1.19013e+07 0.00329252 1.78227e+07 49.9813 0.00643525 0.992648 0 50.0744 GTEX-1B996-2726-SM-7DUGG 1 B1 6 pieces; target muscularis with scant detached fragments of colonic glands in association with a few pieces (arrows) 7.5 Colon Colon - Sigmoid 0001159 1111 1309 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992978 204800 0.971328 0.993717 0.804645 22774 1 76 0.00273148 178 0 8.05668e+07 0.02841 328013 8.10762e+07 7.08944e+06 22800 4.01402e+07 0 0.166683 0.993717 0.79959 8.05668e+07 0.00400711 1.72606e+07 7.07179e+06 1.74375e+07 194 1.74496e+07 1.37623e+07 0.00336882 1.73052e+07 49.7923 0.00404574 0.994456 0 50.255 GTEX-1B996-2926-SM-7MXUH 1 B1 2 pieces; focal meninges (arrows); Purkinje cells present 6.9 Brain Brain - Cerebellum 0002037 1137 1283 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977135 346342 0.928858 0.986008 0.722185 24705 1 76 0.00330168 129 0 6.88792e+07 0.0708439 1.29722e+06 6.98566e+07 1.14232e+07 24734 3.40568e+07 0 0.206673 0.986008 0.71208 6.88792e+07 0.00439386 1.45248e+07 2.11933e+07 1.46329e+07 148 1.48738e+07 8.32994e+06 0.00384286 1.48359e+07 49.9362 0.0185698 0.994881 0 50.1854 GTEX-1B996-3026-SM-7MKG8 1 B1 1 piece; adenohypophysis and neurohypophysis (outlined) present 7.6 Pituitary Pituitary 0000007 1138 1282 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983946 396285 0.96266 0.989432 0.763556 25714 1 76 0.00373951 204 0 9.24489e+07 0.0371222 358038 9.34364e+07 1.31147e+07 25745 4.5821e+07 0 0.199105 0.989432 0.755487 9.24489e+07 0.00523208 1.98128e+07 1.39697e+07 2.00283e+07 229 2.02712e+07 1.41659e+07 0.00448166 2.00422e+07 49.716 0.00383189 0.994918 0 50.2705 GTEX-1BAJH-0003-SM-7J39G B1 Blood Whole Blood 0013756 1082 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1BAJH-0003-SM-7MA6G B1 Blood Whole Blood 0013756 1082 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1BAJH-0005-SM-7PC1R B1 8.7 Blood Whole Blood 0013756 1082 BP-54424 RNA isolation_PAXgene Blood RNA (Manual) 06/27/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.954996 402173 0.979969 0.957832 0.808578 19241 1 76 0.00309359 119 0 1.00675e+08 0.0183339 206092 1.05107e+08 1.5716e+07 19249 4.99817e+07 0 0.171391 0.957832 0.774482 1.00675e+08 0.00519878 2.37459e+07 1.65952e+08 2.36197e+07 158 2.37235e+07 2.68245e+07 0.00414307 2.39521e+07 50.2398 0.00196078 0.960668 0 49.8667 GTEX-1BAJH-0008-SM-EXOI3 B1 7.6 Skin Cells - Cultured fibroblasts EFO_0002009 1242 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991635 727890 0.983137 0.993596 0.864122 21379 1 76 0.00169619 289 0 1.22202e+08 0.0165532 255449 1.2299e+08 7.37599e+06 21401 6.08342e+07 0 0.119015 0.993596 0.858588 1.22202e+08 0.00273608 2.76037e+07 1.10606e+07 2.76663e+07 316 2.78476e+07 3.24145e+07 0.00221511 2.76491e+07 49.8211 0.00207699 0.995558 0 50.0567 GTEX-1BAJH-0011-R10a-SM-7MXT9 B1, A1 6 Brain Brain - Frontal Cortex (BA9) 0009834 1100 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976856 270012 0.96728 0.986366 0.829225 23084 1 76 0.00304892 269 0 8.36411e+07 0.0325178 5.71037e+06 8.47972e+07 1.27472e+07 23099 4.13511e+07 0 0.138055 0.986366 0.817919 8.36411e+07 0.00422003 1.79905e+07 3.06221e+07 1.80802e+07 269 1.82769e+07 6.80899e+06 0.00362883 1.84653e+07 50.2563 0.0673415 0.995875 0 50.1243 GTEX-1BAJH-0011-R11b-SM-7IGLM B1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1100 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992914 697585 0.951748 0.99408 0.765727 23954 1 76 0.00225771 372 0 1.09246e+08 0.0478994 3.01372e+06 1.09897e+08 6.59184e+06 23993 5.44153e+07 0 0.186021 0.99408 0.761194 1.09246e+08 0.00287103 2.35565e+07 1.91177e+07 2.39384e+07 335 2.39284e+07 1.13147e+07 0.00256401 2.36736e+07 49.7324 0.0274231 0.995246 0 50.4021 GTEX-1BAJH-0011-R1a-SM-7P8SV B1, A1 5.9 Brain Brain - Hippocampus 0001954 1100 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.910944 566076 0.925211 0.946143 0.767011 26325 1 76 0.00508064 151 0 7.58665e+07 0.0745321 6.24288e+06 8.0185e+07 1.41246e+07 26345 3.63523e+07 0 0.1582 0.946143 0.725702 7.58665e+07 0.00966105 1.56799e+07 2.31595e+07 1.53378e+07 182 1.66426e+07 5.65533e+06 0.00728564 1.67396e+07 50.1454 0.077856 0.981343 0 49.4485 GTEX-1BAJH-0011-R3a-SM-7IGNU B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1100 BP-56933 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994698 473191 0.964363 0.995796 0.840904 23121 1 76 0.00207704 266 0 8.41724e+07 0.0352408 5.8177e+06 8.45278e+07 5.33589e+06 23137 4.19538e+07 0 0.123459 0.995796 0.837369 8.41724e+07 0.0028532 1.82367e+07 2.31309e+07 1.87002e+07 320 1.861e+07 7.38424e+06 0.00246469 1.83973e+07 49.7127 0.0688259 0.996894 0 50.6274 GTEX-1BAJH-0011-R6b-SM-7MXT2 B1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1100 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.981341 356564 0.958977 0.988395 0.826425 23476 1 76 0.00286595 269 0 8.50292e+07 0.0408579 7.08676e+06 8.60276e+07 1.07314e+07 23490 4.21466e+07 0 0.132552 0.988395 0.816834 8.50292e+07 0.00400114 1.8173e+07 3.0385e+07 1.8453e+07 268 1.84875e+07 6.56963e+06 0.00342949 1.86425e+07 50.2088 0.0823777 0.99545 0 50.3822 GTEX-1BAJH-0011-R8a-SM-7MXUB B1, A1 6 Brain Brain - Hypothalamus 0001898 1100 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975659 259550 0.968739 0.985696 0.83084 23581 1 76 0.00303331 269 0 8.10325e+07 0.0310465 5.41482e+06 8.22085e+07 1.29108e+07 23593 4.00385e+07 0 0.137899 0.985696 0.818956 8.10325e+07 0.0042933 1.7518e+07 2.90588e+07 1.76808e+07 264 1.78834e+07 7.10034e+06 0.00365689 1.80135e+07 50.1812 0.0658669 0.995732 0 50.2312 GTEX-1BAJH-0011-R9b-SM-7EPIQ B1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 1100 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991019 454706 0.959762 0.993551 0.825697 23525 1 76 0.00304193 183 0 9.56655e+07 0.0399001 3.68437e+06 9.62865e+07 1.25104e+07 23548 4.76272e+07 0 0.134065 0.993551 0.820372 9.56655e+07 0.0115141 2.10575e+07 1.77024e+07 2.15691e+07 201 2.14037e+07 1.15338e+07 0.00726723 2.14426e+07 50.0454 0.0382646 0.996083 0 50.6001 GTEX-1BAJH-0126-SM-7DHMF 0 B1 2 pieces; ~5% internal fat 8.4 Muscle Muscle - Skeletal 0011907 1232 1243 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992084 140298 0.982892 0.993453 0.87143 19691 1 76 0.00328118 148 0 7.82555e+07 0.0168573 654950 7.87712e+07 5.8679e+06 19698 3.89828e+07 0 0.111462 0.993453 0.865725 7.82555e+07 0.00504384 1.66081e+07 6.80708e+06 1.69002e+07 165 1.69061e+07 1.71357e+07 0.0041613 1.66953e+07 49.6864 0.00831459 0.994822 0 50.4359 GTEX-1BAJH-0226-SM-7EPHQ 1 B1 2 pieces; eccentric sclerotic plaque with calcification and 25-50% luminal compromise (arrow) 6.9 Blood Vessel Artery - Tibial 0007610 1235 1240 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989326 196903 0.973126 0.991544 0.789446 23350 1 76 0.00312984 143 0 9.34038e+07 0.0265222 379339 9.42004e+07 1.23517e+07 23384 4.64717e+07 0 0.18368 0.991544 0.78277 9.34038e+07 0.0117703 2.01498e+07 8.3877e+06 2.02977e+07 160 2.0331e+07 1.67344e+07 0.0074404 2.03099e+07 49.974 0.00402694 0.993762 0 50.1828 GTEX-1BAJH-0326-SM-73KWM 1 B1 2 pieces; ~10-20% internal/external fat; up to 0.6mm external 7.1 Nerve Nerve - Tibial 0001323 1236 1239 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.987877 203359 0.963657 0.989083 0.744223 24158 1 76 0.00277727 156 0 7.19234e+07 0.0361307 306323 7.27172e+07 7.50219e+06 24192 3.57978e+07 0 0.219434 0.989083 0.736099 7.19234e+07 0.00336467 1.57746e+07 7.09378e+06 1.57857e+07 167 1.57834e+07 9.89618e+06 0.00307062 1.58617e+07 50.1238 0.00421252 0.99029 0 50.0176 GTEX-1BAJH-0426-SM-73KWY 1 B1 2 pieces; ~10 to 15% fibrovascular component 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 1239 1236 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992034 393093 0.975013 0.993316 0.787281 23534 1 76 0.00260017 178 0 8.21517e+07 0.0246936 406273 8.27045e+07 8.04153e+06 23569 4.0897e+07 0 0.187731 0.993316 0.782019 8.21517e+07 0.00326962 1.81666e+07 7.34096e+06 1.81467e+07 192 1.82269e+07 1.41095e+07 0.00293446 1.81917e+07 49.9516 0.00491235 0.994599 0 49.9726 GTEX-1BAJH-0526-SM-793CQ 1 B1 6 pieces; up to ~10% internal fat, mostly periadnexal 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1242 1233 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993092 342102 0.976122 0.994465 0.813725 22722 1 76 0.00290943 177 0 7.00952e+07 0.0236481 365342 7.04853e+07 1.01896e+07 22745 3.49133e+07 0 0.162396 0.994465 0.809221 7.00952e+07 0.00370811 1.53218e+07 7.49045e+06 1.53173e+07 161 1.53842e+07 1.26532e+07 0.00330822 1.53468e+07 49.9392 0.00518324 0.995838 0 49.9926 GTEX-1BAJH-0626-SM-7P8OY 1 B1 2 pieces; fibromuscular stroma and glandular component with corpora amylacea 6.4 Prostate Prostate 0002367 1247 1228 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988633 313335 0.968939 0.99045 0.780425 25600 1 76 0.00313178 273 0 1.00908e+08 0.030793 1.68543e+06 1.01881e+08 1.34104e+07 25639 5.02274e+07 0 0.188514 0.99045 0.772972 1.00908e+08 0.0041908 2.22301e+07 1.18466e+07 2.26611e+07 299 2.2714e+07 1.36509e+07 0.00366032 2.23517e+07 49.5981 0.0165431 0.992267 0 50.48 GTEX-1BAJH-0726-SM-7IGMF 1 B1 2 pieces; thick tubular basement membranes, some interstitial fibrosis and decreased seprmatogenesis 6 Testis Testis 0000473 1249 1226 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993476 313494 0.933419 0.994348 0.734306 32196 1 76 0.00220621 164 0 7.64484e+07 0.0663093 1.27493e+06 7.68829e+07 5.05406e+06 32251 3.81091e+07 0 0.199114 0.994348 0.730156 7.64484e+07 0.00274889 1.59983e+07 9.49318e+06 1.62127e+07 165 1.62197e+07 1.14841e+07 0.00247731 1.60504e+07 49.7378 0.0165827 0.995221 0 50.3328 GTEX-1BAJH-0826-SM-7EWEF 1 B1 2 pieces; 60% and 20% fat and dense fibrous stroma with scattered ductal structures 6.4 Breast Breast - Mammary Tissue 0008367 1267 1208 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990267 202931 0.972975 0.992274 0.791007 24994 1 76 0.00236146 135 0 5.77618e+07 0.0267276 356702 5.82115e+07 5.10562e+06 25019 2.8724e+07 0 0.181968 0.992274 0.784896 5.77618e+07 0.00368219 1.27724e+07 5.75782e+06 1.28278e+07 134 1.28717e+07 1.02992e+07 0.00302049 1.28373e+07 49.9331 0.00612769 0.994281 0 50.1083 GTEX-1BAJH-0926-SM-79OO6 1 B1 2 pieces; some fibrosis with vague parenchymal nodularity 6.7 Thyroid Thyroid 0002046 1274 1201 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.992865 163875 0.9726 0.992891 0.77447 23219 1 76 0.00307277 129 0 6.40947e+07 0.027103 399843 6.45536e+07 3.7474e+06 23248 3.19165e+07 0 0.198129 0.992891 0.768965 6.40947e+07 0.00436991 1.41924e+07 5.31728e+06 1.42438e+07 142 1.42668e+07 1.0525e+07 0.00372132 1.41716e+07 49.8327 0.00619397 0.992918 0 50.0903 GTEX-1BAJH-1026-SM-7EWEG 1 B1 2 pieces; 5% to 20% internal fat 6.3 Heart Heart - Atrial Appendage 0006631 1293 1182 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991595 233810 0.979008 0.993589 0.814775 21559 1 76 0.00226704 129 0 6.38009e+07 0.0207242 1.87432e+06 6.42126e+07 5.47577e+06 21580 3.17382e+07 0 0.164232 0.993589 0.809551 6.38009e+07 0.00347974 1.39896e+07 7.9348e+06 1.4114e+07 160 1.4122e+07 9.43734e+06 0.00287217 1.40914e+07 49.9458 0.0291893 0.995582 0 50.2214 GTEX-1BAJH-1126-SM-7PBYG 1 B1 6 pieces; evolving plaque and attached adventitia up tp ~0.7mm 6.6 Blood Vessel Artery - Aorta 0001496 1294 1181 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988086 222506 0.972494 0.991499 0.752941 23601 1 76 0.00305207 211 0 1.01698e+08 0.0271368 197049 1.0257e+08 1.38527e+07 23641 5.05114e+07 0 0.219553 0.991499 0.74654 1.01698e+08 0.00481026 2.19955e+07 9.37526e+06 2.21598e+07 248 2.22418e+07 1.62314e+07 0.00392814 2.22469e+07 50.0057 0.00192112 0.994911 0 50.1861 GTEX-1BAJH-1226-SM-7SB7A 1 B1 2 pieces; one with significant calcific atherosclerosis with luminal compromise and 1.5mm attached fat (unable to definitively quanitfy narrowing due to fragmentation of the calcification, but likely >90%); other with eccentric fibrosclerotic plaque and 75% luminal compromise and 0.5mm attached fat 6 Blood Vessel Artery - Coronary 0001621 1307 1168 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986769 169797 0.966218 0.990127 0.700388 25308 1 76 0.00307744 156 0 7.82795e+07 0.0335613 1.16653e+06 7.90601e+07 9.31938e+06 25356 3.88837e+07 0 0.26583 0.990127 0.693473 7.82795e+07 0.00462936 1.7169e+07 1.09761e+07 1.74648e+07 177 1.75213e+07 8.56275e+06 0.00385077 1.73622e+07 49.772 0.014755 0.993485 0 50.4271 GTEX-1BAJH-1326-SM-7RHFS 2 B1 2 pieces; one piece includes pleura (not target region) and several larger vessels, scattered aggregates of lymphocytes (outlined), interstitial fibrosis and many pulmonary macrophages, congestion 7.3 Lung Lung 0008952 1302 1173 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.988284 173957 0.975924 0.990416 0.744833 24874 1 76 0.00342003 277 0 1.08469e+08 0.0213362 350650 1.09518e+08 9.68877e+06 24922 5.38377e+07 0 0.231091 0.990416 0.737695 1.08469e+08 0.0047916 2.41954e+07 1.54801e+07 2.43575e+07 274 2.44318e+07 1.68088e+07 0.00410434 2.43399e+07 49.9058 0.00320174 0.992549 0 50.1669 GTEX-1BAJH-1526-SM-7RHGI 1 B1 2 pieces; congestion 6.9 Liver Liver 0001114 1311 1164 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99056 389621 0.968104 0.992964 0.811221 22641 1 76 0.00253819 272 0 1.17658e+08 0.0317466 2.2032e+06 1.18492e+08 1.13291e+07 22671 5.85773e+07 0 0.156883 0.992964 0.805513 1.17658e+08 0.0037029 2.53209e+07 1.97982e+07 2.55607e+07 310 2.56228e+07 2.20177e+07 0.00311913 2.55197e+07 49.8993 0.0185937 0.995367 0 50.2356 GTEX-1BAJH-1626-SM-73KUV 1 B1 2 pieces; some interstitial fibrosis 6.8 Heart Heart - Left Ventricle 0006566 1312 1163 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990037 208604 0.982555 0.991158 0.832389 21767 1 76 0.00411527 266 0 9.57531e+07 0.0173118 5.11748e+06 9.66073e+07 4.50112e+06 21788 4.76641e+07 0 0.150166 0.991158 0.825029 9.57531e+07 0.00433247 2.09686e+07 2.23637e+07 2.16419e+07 328 2.16353e+07 1.06698e+07 0.00422375 2.10787e+07 49.3485 0.0529721 0.992279 0 50.7901 GTEX-1BAJH-1826-SM-731DA 1 B1 6 pieces; glomeruli in all sections, mild arterio and arteriolonephrosclerosis with rare sclerotic glomeruli (rep outlined) 5.7 Kidney Kidney - Cortex 0001225 1317 1158 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990307 257802 0.974032 0.992491 0.80123 22659 1 76 0.00349556 116 0 5.40476e+07 0.025779 2.10854e+06 5.44566e+07 6.62165e+06 22678 2.68655e+07 0 0.172803 0.992491 0.795213 5.40476e+07 0.00417517 1.19877e+07 6.53466e+06 1.22356e+07 142 1.23405e+07 5.93998e+06 0.00383462 1.19953e+07 49.2907 0.0387196 0.994674 0 50.5118 GTEX-1BAJH-1926-SM-7MGWM 1 B1 6 pieces; well trimmed target muscularis, few tiny fragments of squamous epithelium (typically detached, rep outlined) 6.7 Esophagus Esophagus - Muscularis 0004648 1319 1156 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988122 109024 0.969592 0.990761 0.794248 22359 1 76 0.00287139 124 0 6.05127e+07 0.0302217 1.25884e+06 6.1077e+07 5.14151e+06 22377 3.01075e+07 0 0.175344 0.990761 0.78691 6.05127e+07 0.00380272 1.30252e+07 5.76044e+06 1.31873e+07 148 1.31751e+07 7.6951e+06 0.00333581 1.31855e+07 50.0196 0.0206108 0.9934 0 50.3092 GTEX-1BAJH-2026-SM-7P8OZ 2 B1 6 pieces; epithelium is partially sloughed, scattered aggregates of lymphocytes (arrows), rare cluster of submucosal glands (outlined), congestion 5.6 Esophagus Esophagus - Mucosa 0006920 1320 1155 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987394 263159 0.971549 0.989685 0.786682 24397 1 76 0.00321301 203 0 8.80446e+07 0.028242 896280 8.89623e+07 1.32714e+07 24428 4.37983e+07 0 0.184867 0.989685 0.778567 8.80446e+07 0.00436203 1.93554e+07 1.01771e+07 1.97068e+07 233 1.97698e+07 1.24672e+07 0.00378619 1.94879e+07 49.641 0.0100748 0.991976 0 50.4498 GTEX-1BAJH-2126-SM-7EWFB 1 B1 2 pieces; lobulated mature adipose tisssue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1324 1151 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992424 99015 0.972527 0.993941 0.792355 23133 1 76 0.00232287 133 0 6.3611e+07 0.0272483 1.01189e+06 6.39988e+07 5.14962e+06 23156 3.16738e+07 0 0.180172 0.993941 0.787554 6.3611e+07 0.00321585 1.40497e+07 7.63981e+06 1.41577e+07 158 1.41545e+07 8.61336e+06 0.00276868 1.41446e+07 49.9826 0.0158111 0.995458 0 50.1914 GTEX-1BAJH-2226-SM-7IGLK 1 B1 6 pieces; well trimmed target muscularis 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 1325 1150 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992847 348600 0.97149 0.993772 0.815553 24603 1 76 0.00220201 521 0 1.71744e+08 0.0283271 5.32792e+06 1.7282e+08 1.07729e+07 24651 8.55752e+07 0 0.155937 0.993772 0.810474 1.71744e+08 0.00325177 3.74818e+07 1.81912e+07 3.83151e+07 438 3.80828e+07 1.78245e+07 0.0027264 3.78562e+07 49.8508 0.0308293 0.994697 0 50.5497 GTEX-1BAJH-2326-SM-7IGMO 2 B1 6 pieces; autolyzed colonic epithelium, preserved muscularis and up to 50% external fat 6.1 Colon Colon - Transverse 0001157 1326 1149 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993174 386252 0.970121 0.994067 0.807183 24709 1 76 0.00227063 208 0 9.03282e+07 0.0287191 664668 9.08674e+07 5.68224e+06 24738 4.49588e+07 0 0.162938 0.994067 0.802394 9.03282e+07 0.00315838 1.96156e+07 9.26402e+06 1.98055e+07 254 1.97816e+07 1.43263e+07 0.0027141 1.97193e+07 49.9213 0.00731471 0.994959 0 50.2409 GTEX-1BAJH-2426-SM-7IGP8 1 B1 6 pieces; ~10 to 15% external/internal fat and empty dermal spaces 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1328 1147 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99522 132892 0.976873 0.995339 0.834296 22322 1 76 0.00188018 152 0 6.62754e+07 0.0229145 331610 6.65857e+07 2.8513e+06 22340 3.30313e+07 0 0.142577 0.995339 0.830408 6.62754e+07 0.00242839 1.45747e+07 7.10767e+06 1.46961e+07 163 1.46927e+07 1.23469e+07 0.00215425 1.4592e+07 49.828 0.0049802 0.995458 0 50.2074 GTEX-1BAJH-2526-SM-7IGOT 2 B1 5 pieces; abundant mucosal lymphoid tissue and autolyzed mucosa 5.8 Small Intestine Small Intestine - Terminal Ileum 0001211 1349 1126 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994346 128666 0.970801 0.994505 0.797948 23731 1 76 0.00203434 164 0 6.98592e+07 0.0288889 1.29536e+06 7.02452e+07 3.2251e+06 23757 3.48066e+07 0 0.172853 0.994505 0.793564 6.98592e+07 0.00240735 1.52687e+07 6.55826e+06 1.55678e+07 188 1.55418e+07 9.55238e+06 0.00222081 1.53105e+07 49.6252 0.0184406 0.994665 0 50.485 GTEX-1BAJH-2626-SM-7EPG6 2 B1 2 pieces; adrenal cortex (predominantly) and medulla, 20% external fat 6.8 Adrenal Gland Adrenal Gland 0002369 1330 1145 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99208 256586 0.972143 0.994234 0.827007 23076 1 76 0.00299381 150 0 9.32131e+07 0.0275556 2.60429e+06 9.37536e+07 1.2055e+07 23099 4.64412e+07 0 0.145136 0.994234 0.822238 9.32131e+07 0.0114534 2.0315e+07 1.47651e+07 2.0646e+07 174 2.06636e+07 1.54798e+07 0.00721446 2.04857e+07 49.7838 0.027778 0.996388 0 50.404 GTEX-1BAJH-2726-SM-7IGNJ 2 B1 6 pieces; target muscularis; one small focus of residual markedly autolyzed mucosa (outlined) 6.1 Colon Colon - Sigmoid 0001159 1350 1125 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.979957 267955 0.968203 0.98079 0.826201 24328 1 76 0.00201667 377 0 1.19573e+08 0.0315568 1.69805e+06 1.21915e+08 7.63114e+06 24354 5.95974e+07 0 0.142002 0.98079 0.81033 1.19573e+08 0.0029393 2.52996e+07 1.07139e+07 2.56369e+07 352 2.55483e+07 1.79044e+07 0.00247759 2.54933e+07 49.9461 0.0139281 0.981623 0 50.3311 GTEX-1BAJH-2926-SM-7EPHP 1 B1 1 piece; nice representation of adenohypophysis and neurohypophysis 6.9 Pituitary Pituitary 0000007 1364 1111 BP-55927 RNA Extraction from Paxgene-derived Lysate Plate Based 08/13/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989759 334836 0.963993 0.992269 0.737889 25965 1 76 0.00327371 115 0 8.3271e+07 0.0357324 323227 8.39198e+07 1.16055e+07 26011 4.14359e+07 0 0.226104 0.992269 0.732184 8.3271e+07 0.0118903 1.71971e+07 9.42489e+06 1.73995e+07 138 1.74676e+07 1.26331e+07 0.00757112 1.7315e+07 49.7806 0.00385162 0.994778 0 50.2925 GTEX-1BAJH-3126-SM-7MGXY 2 B1 2 pieces; Purkinje cells observed, mild to moderate autolysis 5.7 Brain Brain - Cerebellum 0002037 1368 1107 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990128 944017 0.910586 0.992249 0.733635 22946 1 76 0.00279021 153 0 6.78347e+07 0.0891827 3.25972e+06 6.83647e+07 5.55069e+06 22967 3.37778e+07 0 0.176951 0.992249 0.727948 6.78347e+07 0.0036264 1.40353e+07 4.42506e+07 1.44784e+07 173 1.44103e+07 5.5334e+06 0.00320741 1.42457e+07 49.7129 0.0476813 0.994369 0 50.777 GTEX-1C2JI-0003-SM-7J39E B1 Blood Whole Blood 0013756 -45 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C2JI-0003-SM-7MA6E B1 Blood Whole Blood 0013756 -45 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C2JI-0006-SM-7MKFD B1 9.3 Blood Whole Blood 0013756 -45 BP-54424 RNA isolation_PAXgene Blood RNA (Manual) 06/27/2014 LCSET-6756 03/23/2015 TruSeq.v1 EXCLUDE 0.986488 367852 0.962214 0.990858 0.810318 19086 1 76 0.00403738 101 0 5.5863e+07 0.0372315 185600 5.63784e+07 7.77192e+06 19101 2.77229e+07 0 0.151896 0.990858 0.80291 5.5863e+07 0.00531645 1.22785e+07 2.54033e+07 1.24058e+07 107 1.25311e+07 1.17964e+07 0.00467409 1.23933e+07 49.7236 0.00329204 0.995229 0 50.258 GTEX-1C2JI-0006-SM-7PC3Q B1 9.3 Blood Whole Blood 0013756 -45 BP-54424 RNA isolation_PAXgene Blood RNA (Manual) 06/27/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987973 909678 0.961529 0.991013 0.808154 19970 1 76 0.00357096 164 0 9.84434e+07 0.0378508 330142 9.93362e+07 1.50826e+07 19986 4.88847e+07 0 0.153375 0.991013 0.800891 9.84434e+07 0.00535333 2.17274e+07 5.27232e+07 2.18711e+07 196 2.20946e+07 2.07884e+07 0.00445941 2.18051e+07 49.6703 0.00332348 0.994053 0 50.1648 GTEX-1C2JI-0008-SM-EXOHZ B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 482 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991717 767950 0.951297 0.993513 0.816462 21190 1 76 0.00169137 290 0 1.18617e+08 0.0483497 251820 1.19392e+08 6.66769e+06 21211 5.90813e+07 0 0.134835 0.993513 0.811165 1.18617e+08 0.00263286 2.57346e+07 4.87856e+07 2.62053e+07 292 2.62495e+07 2.92708e+07 0.00216126 2.58899e+07 49.6552 0.00210919 0.995308 0 50.4532 GTEX-1C2JI-0326-SM-7EWFD 1 B1 2 pieces; 1 is ~20% fat and large vessel 6.3 Thyroid Thyroid 0002046 420 1000 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992157 98126 0.969093 0.993935 0.782492 22676 1 76 0.00240367 113 0 5.77364e+07 0.0306297 386910 5.80887e+07 5.10454e+06 22699 2.87597e+07 0 0.186602 0.993935 0.777746 5.77364e+07 0.00340176 1.26761e+07 6.87164e+06 1.27681e+07 138 1.27705e+07 8.13366e+06 0.00290183 1.27632e+07 49.9857 0.00666068 0.995714 0 50.1809 GTEX-1C2JI-0426-SM-79OOF 1 B1 6 pieces; focal mild plaque 6.5 Blood Vessel Artery - Aorta 0001496 425 995 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.990923 97922 0.973561 0.990871 0.82137 21748 1 76 0.00306441 133 0 6.23796e+07 0.0261264 278622 6.29543e+07 3.97992e+06 21763 3.10567e+07 0 0.15219 0.990871 0.813872 6.23796e+07 0.00442092 1.35159e+07 4.39417e+06 1.3623e+07 148 1.35912e+07 1.03387e+07 0.0037427 1.35461e+07 49.9171 0.00442578 0.990819 0 50.1972 GTEX-1C2JI-0526-SM-7EWEQ 0 B1 2 pieces; 1 piece has 10% attachment of fat/vessel 6.4 Heart Heart - Left Ventricle 0006566 427 993 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993032 124307 0.984614 0.994817 0.855661 19520 1 76 0.00235493 148 0 6.63706e+07 0.0151791 1.52108e+06 6.67164e+07 5.75112e+06 19530 3.30759e+07 0 0.128954 0.994817 0.851226 6.63706e+07 0.00331143 1.46253e+07 1.62954e+07 1.47268e+07 181 1.47166e+07 9.51353e+06 0.00283232 1.47423e+07 50.0435 0.0227991 0.996601 0 50.1729 GTEX-1C2JI-0626-SM-7DHM1 0 B1 2 pieces; 1 piece is ~15% fat, some interstitial fibrosis 8.1 Heart Heart - Atrial Appendage 0006631 430 990 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992438 109077 0.982434 0.993747 0.853377 21100 1 76 0.00354239 266 0 8.36993e+07 0.0173288 1.5002e+06 8.42259e+07 6.17284e+06 21113 4.17072e+07 0 0.129058 0.993747 0.848041 8.36993e+07 0.0051871 1.80781e+07 1.41634e+07 1.83871e+07 259 1.83462e+07 1.21578e+07 0.00436366 1.81938e+07 49.7915 0.0178116 0.995057 0 50.4236 GTEX-1C2JI-0826-SM-7EPHB 0 B1 2 pieces; mature adipose tissue 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 440 980 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990383 228040 0.973853 0.992988 0.816054 23274 1 76 0.00315481 146 0 9.00517e+07 0.0258464 896651 9.06876e+07 1.22179e+07 23303 4.48399e+07 0 0.157799 0.992988 0.810332 9.00517e+07 0.0117502 1.96182e+07 1.0212e+07 2.01292e+07 175 2.01071e+07 1.25222e+07 0.00744122 1.9848e+07 49.6758 0.00988725 0.995593 0 50.6427 GTEX-1C2JI-0926-SM-731F1 1 B1 2 pieces; includes ~ 15 fat and 20% fat/vessels 7 Pancreas Pancreas 0001150 444 976 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196,LCSET-6685 01/18/2015 TruSeq.v1 RNASEQ 0.988368 340334 0.979599 0.991333 0.838124 20299 1 76 0.0031887 103 0 6.06758e+07 0.0201606 131112 6.12063e+07 7.78509e+06 20311 3.01292e+07 0 0.141475 0.991333 0.830859 6.06758e+07 0.00411402 1.3938e+07 1.98264e+07 1.40901e+07 113 1.41607e+07 1.82471e+07 0.00364998 1.40391e+07 49.7843 0.00214213 0.994297 0 50.2712 GTEX-1C2JI-1026-SM-73KY1 1 B1 6 pieces; some defects in tissue (? poor fixation), up to ~10% internal/external fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 445 975 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.9934 208852 0.96914 0.994537 0.776846 23129 1 76 0.00263346 190 0 7.95269e+07 0.0306769 539186 7.99637e+07 7.6208e+06 23154 3.96388e+07 0 0.192295 0.994537 0.772602 7.95269e+07 0.0032314 1.74771e+07 1.03515e+07 1.75337e+07 195 1.75361e+07 1.19634e+07 0.00293209 1.75661e+07 50.0427 0.00674288 0.995675 0 50.0809 GTEX-1C2JI-1126-SM-731FH 1 B1 6 pieces; epithelium is partially sloughed/detached, few clusters of submucosal glands and lymphoid aggregates 9.5 Esophagus Esophagus - Mucosa 0006920 448 972 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990854 446909 0.977477 0.992757 0.851461 21690 1 76 0.00344963 136 0 6.7503e+07 0.0220467 250547 6.79955e+07 8.21182e+06 21701 3.35565e+07 0 0.126016 0.992757 0.845293 6.7503e+07 0.00408513 1.51775e+07 7.94384e+06 1.52088e+07 149 1.52798e+07 1.40996e+07 0.00376677 1.52315e+07 49.9207 0.00368476 0.99466 0 50.0515 GTEX-1C2JI-1226-SM-7DHM2 1 B1 6 pieces; target musculairs 8.3 Esophagus Esophagus - Muscularis 0004648 451 969 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990595 212079 0.976296 0.99161 0.850213 21919 1 76 0.00346302 175 0 7.4507e+07 0.0233598 460070 7.51374e+07 5.84964e+06 21930 3.70619e+07 0 0.126083 0.99161 0.843079 7.4507e+07 0.00535081 1.60254e+07 5.90793e+06 1.62316e+07 173 1.62254e+07 1.35226e+07 0.00440595 1.60968e+07 49.801 0.00612305 0.992625 0 50.3197 GTEX-1C2JI-1326-SM-7IGMX 0 B1 6 pieces; target muscularis, includes few detached strips of squamous epithelium and some nerves 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 454 966 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995515 144237 0.973332 0.996261 0.832783 21564 1 76 0.00206904 173 0 7.2193e+07 0.0263976 762839 7.24639e+07 4.57849e+06 21580 3.60034e+07 0 0.140549 0.996261 0.82967 7.2193e+07 0.00258371 1.54926e+07 6.51955e+06 1.57794e+07 190 1.571e+07 1.14312e+07 0.00232618 1.56122e+07 49.8439 0.0105272 0.997007 0 50.4585 GTEX-1C2JI-1626-SM-7EPHC 2 B1 6 pieces; fragments of muscularis with some, largely autolyzed, residual mucosa 6.9 Colon Colon - Transverse 0001157 470 950 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990971 192377 0.975001 0.993341 0.830567 24094 1 76 0.00307729 163 0 9.52367e+07 0.0247208 791408 9.58751e+07 1.28466e+07 24122 4.74431e+07 0 0.144434 0.993341 0.825036 9.52367e+07 0.0115364 2.05198e+07 1.06171e+07 2.0984e+07 177 2.09535e+07 1.49658e+07 0.00729676 2.07483e+07 49.7539 0.00825457 0.995711 0 50.5592 GTEX-1C2JI-1726-SM-73KUW 2 B1 6 pieces; mostly full thickness sections of colon, moderate autolysis 7.8 Colon Colon - Sigmoid 0001159 472 948 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989683 342984 0.972983 0.991146 0.809523 23291 1 76 0.00413144 178 0 8.58322e+07 0.0267122 402264 8.6599e+07 4.18469e+06 23318 4.26896e+07 0 0.16346 0.991146 0.802356 8.58322e+07 0.00453815 1.85962e+07 7.34368e+06 1.87734e+07 190 1.88102e+07 1.46588e+07 0.00433449 1.86794e+07 49.8255 0.00464514 0.992609 0 50.237 GTEX-1C2JI-1826-SM-73KXC 1 B1 6 pieces; predominantly well trimmed, small amount internal fat, epidermis measures 48 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 481 939 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993585 276997 0.971958 0.994777 0.784508 24181 1 76 0.00265814 189 0 7.90909e+07 0.0277967 549239 7.95061e+07 7.46791e+06 24207 3.94112e+07 0 0.18745 0.994777 0.78041 7.90909e+07 0.0032687 1.73734e+07 7.45281e+06 1.74544e+07 187 1.7463e+07 1.2826e+07 0.00296306 1.74576e+07 49.9923 0.00690814 0.995969 0 50.1163 GTEX-1C2JI-1926-SM-73KXO 1 B1 6 pieces; medial calcific sclerosis, mild atheromatous change 8.1 Blood Vessel Artery - Tibial 0007610 563 857 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993416 238393 0.97502 0.994442 0.833393 20742 1 76 0.00255908 144 0 6.91161e+07 0.0245109 211512 6.95023e+07 6.62233e+06 20761 3.4436e+07 0 0.141627 0.994442 0.828761 6.91161e+07 0.00304616 1.49077e+07 4.63828e+06 1.49628e+07 156 1.49789e+07 1.3616e+07 0.00280236 1.49597e+07 49.9679 0.00304324 0.995469 0 50.0922 GTEX-1C2JI-2026-SM-7IGML 1 B1 2 pieces; includes up to 40-50% attached and internal fat 6.1 Nerve Nerve - Tibial 0001323 564 856 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 EXCLUDE 0.99437 209116 0.970521 0.994967 0.763126 24249 1 76 0.00223496 210 0 8.74278e+07 0.0291946 488074 8.78701e+07 5.45392e+06 24287 4.3578e+07 0 0.207395 0.994967 0.759285 8.74278e+07 0.00275818 1.90747e+07 9.27255e+06 1.93582e+07 223 1.93129e+07 1.2722e+07 0.00249641 1.91726e+07 49.8177 0.0055545 0.995565 0 50.3688 GTEX-1C2JI-2126-SM-793CG 0 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 565 855 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.995287 328328 0.983817 0.996385 0.881123 19946 1 76 0.00275314 214 0 8.41533e+07 0.0159423 826244 8.44586e+07 1.20631e+07 19953 4.196e+07 0 0.102694 0.996385 0.877938 8.41533e+07 0.00318398 1.8341e+07 1.04178e+07 1.84642e+07 247 1.84911e+07 1.66513e+07 0.00296832 1.8398e+07 49.8737 0.00978283 0.997483 0 50.1674 GTEX-1C2JI-2226-SM-7IGPJ 0 B1 2 pieces; mature adipose tissue with small portion of fibroconnective tissue and vessels 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 567 853 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994874 242208 0.971437 0.995085 0.791647 21968 1 76 0.00200788 153 0 6.93515e+07 0.0282731 385817 6.96941e+07 2.7735e+06 21994 3.45668e+07 0 0.179789 0.995085 0.787756 6.93515e+07 0.00234832 1.51206e+07 7.36786e+06 1.53754e+07 171 1.53537e+07 1.05433e+07 0.00217807 1.51629e+07 49.6873 0.00553586 0.995295 0 50.4177 GTEX-1C2JI-5001-SM-AN45Q B1 Heart Heart - Left Ventricle 0006566 429 ChIP-Seq GTEX-1C2JI-5013-SM-AN45P B1 Muscle Muscle - Skeletal 0011907 561 ChIP-Seq GTEX-1C475-0003-SM-7J3B4 B1 Blood Whole Blood 0013756 -146 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C475-0003-SM-7MA7G B1 Blood Whole Blood 0013756 -146 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C475-0006-SM-9MQL7 B1 9.1 Blood Whole Blood 0013756 -146 BP-54424 RNA isolation_PAXgene Blood RNA (Manual) 06/27/2014 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983423 605012 0.955562 0.985539 0.776035 18872 1 76 0.0058798 110 0 7.15616e+07 0.0437444 190453 7.26116e+07 8.55057e+06 18884 3.56098e+07 0 0.179528 0.985539 0.764813 7.15616e+07 0.00767867 1.56544e+07 4.56273e+07 1.58893e+07 125 1.59451e+07 1.40315e+07 0.00677731 1.57482e+07 49.6894 0.0026229 0.987655 0 50.3723 GTEX-1C475-0008-SM-EXOI1 B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 211 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989101 1.43426e+06 0.911564 0.991133 0.77081 21780 1 76 0.00164388 289 0 1.28281e+08 0.0878108 386496 1.29428e+08 7.36755e+06 21802 6.38663e+07 0 0.140754 0.991133 0.763976 1.28281e+08 0.00276788 2.64593e+07 1.09319e+08 2.7313e+07 302 2.73771e+07 2.97568e+07 0.00220473 2.6641e+07 49.3187 0.00298618 0.993165 0 50.7938 GTEX-1C475-0126-SM-731DC 0 B1 2 pieces; cortex and medulla, trivial amount of attached fat 9.6 Adrenal Gland Adrenal Gland 0002369 64 962 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.992957 361783 0.97896 0.994659 0.845763 21773 1 76 0.00316391 124 0 6.04973e+07 0.0205604 866192 6.08222e+07 7.57287e+06 21787 3.01083e+07 0 0.133197 0.994659 0.841245 6.04973e+07 0.00350294 1.34595e+07 5.75785e+06 1.35266e+07 141 1.36155e+07 1.10961e+07 0.00333314 1.34614e+07 49.7154 0.0142414 0.996361 0 50.1244 GTEX-1C475-0226-SM-7MGXM 1 B1 2 pieces; extensive lymphocytic infiltrate with germinal center formation, fibrosis, and oncocytic change c/w Hashimoto's thyroiditis 8.1 Thyroid Thyroid 0002046 66 960 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988204 151219 0.967802 0.990023 0.792206 23733 1 76 0.00371726 133 0 6.66599e+07 0.0280258 275067 6.73316e+07 4.6885e+06 23761 3.30635e+07 0 0.175596 0.990023 0.784302 6.66599e+07 0.00449173 1.47625e+07 1.21812e+07 1.4841e+07 144 1.48857e+07 1.08473e+07 0.00410378 1.48296e+07 49.9057 0.00408526 0.991843 0 50.1327 GTEX-1C475-0326-SM-7SB8O 0 B1 2 pieces; adipose tissue with few large vessels in 1 piece 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 67 959 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763,LCSET-7212 05/09/2015 TruSeq.v1 RNASEQ 0.992662 223074 0.971952 0.994284 0.787817 23802 1 76 0.0026581 270 0 9.45542e+07 0.0277755 943602 9.50977e+07 6.7068e+06 23834 4.70881e+07 0 0.184134 0.994284 0.783315 9.45542e+07 0.00378131 2.08121e+07 9.4894e+06 2.09499e+07 256 2.09372e+07 1.44762e+07 0.00321879 2.09719e+07 50.0413 0.00992245 0.995907 0 50.165 GTEX-1C475-0426-SM-7P8OU 0 B1 2 pieces; few inclusion cysts 6.7 Ovary Ovary 0000992 69 957 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.992595 293363 0.975397 0.994283 0.817989 24612 1 76 0.00267672 280 0 1.17264e+08 0.0242712 347143 1.17938e+08 1.59056e+07 24650 5.84177e+07 0 0.157408 0.994283 0.813313 1.17264e+08 0.00333164 2.60221e+07 1.13584e+07 2.63077e+07 294 2.63843e+07 2.27879e+07 0.00300362 2.61331e+07 49.7608 0.00294343 0.995972 0 50.2729 GTEX-1C475-0526-SM-793AC 1 B1 6 pieces; 5 pieces include squamous mucosa, 1 shows chronic inflammation 8.5 Vagina Vagina 0000996 71 955 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.99289 413592 0.974819 0.993806 0.808379 22356 1 76 0.0021869 138 0 5.8902e+07 0.0248279 168762 5.92691e+07 4.51795e+06 22375 2.93007e+07 0 0.166441 0.993806 0.803371 5.8902e+07 0.00284892 1.32116e+07 6.25185e+06 1.31606e+07 137 1.32704e+07 1.12842e+07 0.0025176 1.31554e+07 49.7824 0.00284739 0.994721 0 49.9033 GTEX-1C475-0626-SM-73KV9 0 B1 2 pieces; myometrium only in this section 8.8 Uterus Uterus 0000995 74 952 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.990675 371732 0.97396 0.991393 0.835452 22973 1 76 0.00391003 179 0 8.94646e+07 0.0255949 252915 9.02413e+07 4.48043e+06 22994 4.44926e+07 0 0.138509 0.991393 0.828261 8.94646e+07 0.00403009 1.9507e+07 6.30629e+06 1.96061e+07 202 1.9622e+07 1.74836e+07 0.00397002 1.956e+07 49.9209 0.00280265 0.99211 0 50.1266 GTEX-1C475-0726-SM-73KVL 0 B1 6 pieces; target muscularis 9.2 Esophagus Esophagus - Muscularis 0004648 80 946 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991397 447581 0.978856 0.992711 0.856328 22259 1 76 0.00385458 232 0 1.00636e+08 0.0207867 622413 1.01375e+08 4.66796e+06 22275 5.00755e+07 0 0.122528 0.992711 0.850086 1.00636e+08 0.00415716 2.17545e+07 7.93722e+06 2.19629e+07 254 2.19582e+07 1.98171e+07 0.00400567 2.18887e+07 49.9207 0.00613973 0.994025 0 50.2384 GTEX-1C475-0826-SM-793AD 0 B1 6 pieces; target muscularis, some residual attached submucosa/vessels 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 87 939 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991991 461430 0.977092 0.99297 0.851597 20744 1 76 0.00212848 138 0 5.79411e+07 0.0226001 476355 5.83513e+07 5.4434e+06 20758 2.87801e+07 0 0.125495 0.99297 0.845611 5.79411e+07 0.00279872 1.26253e+07 4.41521e+06 1.26131e+07 148 1.27269e+07 1.06049e+07 0.00246327 1.25669e+07 49.6839 0.00816357 0.993949 0 49.9757 GTEX-1C475-0926-SM-7MKFI 1 B1 6 pieces; erosive esophagitis 8.7 Esophagus Esophagus - Mucosa 0006920 91 935 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986638 383781 0.98042 0.990034 0.860433 22826 1 76 0.00353564 281 0 9.80115e+07 0.0190902 382153 9.89981e+07 1.26148e+07 22842 4.86952e+07 0 0.119987 0.990034 0.851858 9.80115e+07 0.0045759 2.21097e+07 1.59359e+07 2.22881e+07 257 2.24948e+07 2.18327e+07 0.00405399 2.22282e+07 49.7019 0.0038602 0.99343 0 50.2009 GTEX-1C475-1026-SM-7MKFJ 1 B1 6 pieces; mucosa and submucosa only 6.5 Stomach Stomach 0000945 98 928 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.972992 192740 0.985532 0.977119 0.878052 21325 1 76 0.00351547 339 0 8.08310e+07 0.0138402 602486 8.27239e+07 1.11217e+07 21337 4.01068e+07 0 0.10748 0.977119 0.857961 8.08310e+07 0.00480043 1.89323e+07 1.13019e+08 1.8841e+07 242 1.90368e+07 2.48274e+07 0.00415524 1.90689e+07 50.0421 0.0072831 0.981246 0 49.8792 GTEX-1C475-1126-SM-7MGY7 1 B1 2 pieces; 1 piece includes portion of capsule 8.9 Spleen Spleen 0002106 101 925 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991185 113659 0.969937 0.992869 0.804002 22653 1 76 0.00313901 116 0 5.39023e+07 0.0287369 281824 5.42895e+07 3.92687e+06 22676 2.68268e+07 0 0.165934 0.992869 0.798269 5.39023e+07 0.00362549 1.19557e+07 6.27793e+06 1.19441e+07 120 1.19788e+07 9.55912e+06 0.00338184 1.20048e+07 50.0542 0.00519114 0.994552 0 49.9756 GTEX-1C475-1226-SM-7SB72 0 B1 2 pieces; fat (20 and 40%) and dense fibrocollagenous stroma with scattered epithelial component, focal simple hyperplasia 6.7 Breast Breast - Mammary Tissue 0008367 104 922 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989618 267400 0.960214 0.992468 0.688301 25802 1 76 0.00269284 163 0 8.66639e+07 0.0395151 331502 8.73215e+07 1.00023e+07 25857 4.30955e+07 0 0.271913 0.992468 0.683117 8.66639e+07 0.00393908 1.88324e+07 9.79989e+06 1.90547e+07 175 1.9097e+07 1.25374e+07 0.00331417 1.90287e+07 49.9105 0.00379634 0.995319 0 50.2934 GTEX-1C475-1326-SM-7SB73 0 B1 6 pieces; predominantly well trimmed, minimal internal fat 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 110 916 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990117 237170 0.958595 0.992703 0.68057 25760 1 76 0.00263839 170 0 8.17436e+07 0.0412266 967557 8.23445e+07 8.11424e+06 25813 4.06703e+07 0 0.278025 0.992703 0.675604 8.17436e+07 0.00389776 1.77572e+07 1.02014e+07 1.80157e+07 174 1.80234e+07 1.00485e+07 0.00326643 1.79503e+07 49.8984 0.0117501 0.995289 0 50.3612 GTEX-1C475-1426-SM-793CH 1 B1 6 pieces; 3 of 6 have good lymphoid component, 1 piece includes small portion of muscularis 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 116 910 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992321 395405 0.968374 0.993608 0.784092 24542 1 76 0.00334782 145 0 7.35274e+07 0.0304645 351125 7.40005e+07 1.10003e+07 24571 3.65886e+07 0 0.184282 0.993608 0.77908 7.35274e+07 0.00385204 1.62913e+07 8.95161e+06 1.63523e+07 160 1.64235e+07 1.26432e+07 0.00359961 1.63077e+07 49.8231 0.0047449 0.994895 0 50.0935 GTEX-1C475-1526-SM-7DHM3 1 B1 6 pieces; target muscularis with two small strips of residual mucosa 8.1 Colon Colon - Sigmoid 0001159 121 905 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990568 177530 0.977662 0.991685 0.838857 22944 1 76 0.0034817 166 0 7.42049e+07 0.0218846 424431 7.4827e+07 6.12723e+06 22957 3.6914e+07 0 0.138805 0.991685 0.831882 7.42049e+07 0.00531471 1.61752e+07 5.85577e+06 1.63745e+07 169 1.63891e+07 1.36998e+07 0.00439717 1.62355e+07 49.7646 0.00567216 0.992802 0 50.3062 GTEX-1C475-1626-SM-731FP 0 B1 6 pieces; predominantly mucosa and submucosa only with small portion of muscularis in 2 pieces 7.8 Colon Colon - Transverse 0001157 129 897 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.989992 474202 0.974658 0.991929 0.811796 23729 1 76 0.00372761 295 0 9.47689e+07 0.0236457 1.46424e+06 9.554e+07 1.13578e+07 23758 4.70748e+07 0 0.162862 0.991929 0.805244 9.47689e+07 0.00421334 2.10318e+07 1.30323e+07 2.13178e+07 273 2.13864e+07 1.467e+07 0.00397 2.11319e+07 49.7007 0.0153259 0.993866 0 50.3377 GTEX-1C475-1726-SM-73KVX 0 B1 2 pieces 8.6 Muscle Muscle - Skeletal 0011907 208 818 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.992651 352862 0.984732 0.993758 0.875798 20461 1 76 0.00374578 278 0 1.04458e+08 0.0150336 906004 1.05114e+08 4.70824e+06 20470 5.20447e+07 0 0.108934 0.993758 0.870332 1.04458e+08 0.00373645 2.25125e+07 1.79717e+07 2.30972e+07 297 2.3013e+07 2.034e+07 0.00374112 2.27058e+07 49.664 0.00861922 0.994865 0 50.6409 GTEX-1C475-1826-SM-73KWA 0 B1 6 pieces; includes up to 10% internal/attached fat, epidermis measures 52 microns 9.1 Skin Skin - Sun Exposed (Lower leg) 0004264 214 812 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.99187 310296 0.972364 0.993022 0.813775 23365 1 76 0.00395682 299 0 9.98376e+07 0.0272904 281616 1.00539e+08 4.59593e+06 23394 4.97161e+07 0 0.158589 0.993022 0.808097 9.98376e+07 0.00406048 2.14717e+07 1.04226e+07 2.15906e+07 251 2.16277e+07 1.89123e+07 0.00400859 2.15459e+07 49.9052 0.00280106 0.994174 0 50.138 GTEX-1C475-1926-SM-7DUFV 1 B1 2 pieces; mature adipose tissue, few holes (? poor fixation) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 218 808 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.99366 220254 0.9743 0.994233 0.812992 23486 1 76 0.00264173 282 0 9.31242e+07 0.0253345 495208 9.36644e+07 8.25622e+06 23515 4.63993e+07 0 0.161308 0.994233 0.808304 9.31242e+07 0.00385316 2.03948e+07 7.89950e+06 2.05583e+07 260 2.05806e+07 1.63807e+07 0.00324709 2.04251e+07 49.8105 0.00528705 0.994806 0 50.1997 GTEX-1C475-2026-SM-793CI 0 B1 2 pieces; well trimmed, minimal internal fat 7.9 Nerve Nerve - Tibial 0001323 220 806 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993405 353485 0.970081 0.994679 0.782076 24345 1 76 0.0028297 217 0 8.87036e+07 0.0296073 316813 8.91781e+07 1.20707e+07 24389 4.41874e+07 0 0.188006 0.994679 0.777914 8.87036e+07 0.00353335 1.9589e+07 7.07680e+06 1.96126e+07 212 1.96467e+07 1.50936e+07 0.00318107 1.96643e+07 50.0225 0.00355259 0.995953 0 50.0301 GTEX-1C475-2126-SM-7PBXU 1 B1 2 pieces; well trimmed 8 Blood Vessel Artery - Tibial 0007610 221 805 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989427 131494 0.977451 0.992828 0.860322 21074 1 76 0.00268175 169 0 7.35818e+07 0.0221063 228831 7.41133e+07 9.82589e+06 21082 3.65836e+07 0 0.117129 0.992828 0.854153 7.35818e+07 0.00456161 1.57353e+07 5.36731e+06 1.58812e+07 174 1.59387e+07 1.51411e+07 0.00361846 1.59074e+07 49.9509 0.00308758 0.99623 0 50.2307 GTEX-1C4CL-0003-SM-7J39F B1 Blood Whole Blood 0013756 -104 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C4CL-0003-SM-7MA6F B1 Blood Whole Blood 0013756 -104 BP-54339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/26/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C4CL-0005-SM-7MKF3 B1 8.1 Blood Whole Blood 0013756 -104 BP-54424 RNA isolation_PAXgene Blood RNA (Manual) 06/27/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.953925 528447 0.978446 0.959344 0.821065 18002 1 76 0.00332042 109 0 9.35751e+07 0.0200588 146274 9.75407e+07 1.32565e+07 18008 4.6353e+07 0 0.157382 0.959344 0.787683 9.35751e+07 0.00509766 2.2226e+07 1.48388e+08 2.19551e+07 143 2.21667e+07 2.67104e+07 0.00420402 2.25725e+07 50.4535 0.00149962 0.964763 0 49.6935 GTEX-1C4CL-0008-SM-EXOI2 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 348 BP-57251 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991366 567642 0.98212 0.993291 0.857538 22041 1 76 0.00177214 290 0 1.23033e+08 0.0175041 388481 1.23864e+08 6.72129e+06 22067 6.12561e+07 0 0.124582 0.993291 0.851785 1.23033e+08 0.00294864 2.76101e+07 1.1269e+07 2.78299e+07 312 2.78803e+07 3.2101e+07 0.00235925 2.77815e+07 49.9112 0.00313635 0.995216 0 50.1982 GTEX-1C4CL-0126-SM-7IGN5 0 B1 2 pieces, no adherent fat; no atherosis 6.2 Blood Vessel Artery - Tibial 0007610 339 727 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994769 406193 0.97818 0.995477 0.861549 22163 1 76 0.00191859 379 0 1.16494e+08 0.0213567 406944 1.17024e+08 7.2888e+06 22182 5.80422e+07 0 0.116631 0.995477 0.857652 1.16494e+08 0.00274369 2.48726e+07 8.38238e+06 2.51179e+07 350 2.50684e+07 2.46036e+07 0.00233085 2.50098e+07 49.9415 0.00347745 0.996185 0 50.2454 GTEX-1C4CL-0326-SM-7DHMH 0 B1 2 pieces, trace (<5%) interstitial fat 8 Muscle Muscle - Skeletal 0011907 344 722 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992386 197852 0.985304 0.993733 0.885465 19889 1 76 0.0034462 286 0 9.32176e+07 0.0143979 721918 9.38054e+07 7.07693e+06 19895 4.6431e+07 0 0.0998392 0.993733 0.879916 9.32176e+07 0.00516661 2.00068e+07 8.81553e+06 2.03416e+07 266 2.03278e+07 1.90206e+07 0.00430524 2.01245e+07 49.7487 0.00769591 0.995081 0 50.4149 GTEX-1C4CL-0426-SM-7939N 0 B1 2 pieces, ~!5% fascia/vascular elements 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 346 720 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.991854 236865 0.973518 0.992851 0.809413 22042 1 76 0.00240954 143 0 5.61074e+07 0.0261395 285487 5.65114e+07 5.30542e+06 22062 2.78872e+07 0 0.164105 0.992851 0.803627 5.61074e+07 0.00312141 1.23073e+07 4.97640e+06 1.23337e+07 138 1.2415e+07 9.77735e+06 0.00276512 1.2283e+07 49.7329 0.00505185 0.993848 0 50.0537 GTEX-1C4CL-0526-SM-73KVK 0 B1 6 pieces, adherent dermal fat up to ~1.5mm, squamous epithelium is ~45-50 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 348 718 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.98593 309536 0.971358 0.986838 0.812709 23845 1 76 0.00423723 196 0 8.59861e+07 0.0283448 569325 8.71329e+07 4.51571e+06 23874 4.27271e+07 0 0.158649 0.986838 0.802012 8.59861e+07 0.00474746 1.87377e+07 9.14245e+06 1.8931e+07 189 1.8985e+07 1.49277e+07 0.00449211 1.87666e+07 49.7107 0.00653398 0.987747 0 50.2567 GTEX-1C4CL-0626-SM-731DM 1 B1 2 pieces, no abnormalities 7.4 Spleen Spleen 0002106 383 683 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990538 317513 0.96877 0.992456 0.783845 22736 1 76 0.00387107 112 0 5.55433e+07 0.0299752 238769 5.59655e+07 6.43079e+06 22755 2.75954e+07 0 0.184926 0.992456 0.777931 5.55433e+07 0.00452712 1.23652e+07 9.7041e+06 1.24043e+07 121 1.24891e+07 9.00092e+06 0.00419846 1.23827e+07 49.7862 0.00426636 0.994374 0 50.0789 GTEX-1C4CL-0726-SM-7IGP9 1 B1 2 pieces, regressive changes 5.8 Thyroid Thyroid 0002046 393 673 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994624 170102 0.964874 0.994665 0.765443 24139 1 76 0.00213396 140 0 7.00251e+07 0.0348428 315277 7.04007e+07 3.4871e+06 24171 3.48869e+07 0 0.199431 0.994665 0.761359 7.00251e+07 0.00246774 1.51694e+07 6.14444e+06 1.53725e+07 165 1.5369e+07 1.03344e+07 0.00230084 1.5182e+07 49.694 0.00447832 0.994707 0 50.3325 GTEX-1C4CL-0826-SM-7EWEZ 1 B1 2 pieces, moderate congestion; atalectasis 6.3 Lung Lung 0008952 398 668 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992137 99410 0.971574 0.993985 0.76791 23529 1 76 0.00264394 122 0 5.80579e+07 0.0279964 175362 5.84093e+07 4.87536e+06 23551 2.89051e+07 0 0.203664 0.993985 0.763291 5.80579e+07 0.00364492 1.28672e+07 5.72642e+06 1.29625e+07 129 1.29823e+07 9.3553e+06 0.0031435 1.29456e+07 49.9293 0.0030023 0.995833 0 50.1844 GTEX-1C4CL-0926-SM-79OL2 2 B1 2 pieces, moderately advanced saponfication in some foci; Islets stiil visible ( rep encircled), beginning to degrade 7 Pancreas Pancreas 0001150 400 666 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976767 215183 0.978267 0.980779 0.833153 21137 1 76 0.00510272 101 0 5.98818e+07 0.0214285 86726 6.10554e+07 1.38169e+07 21150 2.97839e+07 0 0.145114 0.980779 0.817139 5.98818e+07 0.00666961 1.36108e+07 1.3598e+07 1.37788e+07 109 1.38259e+07 1.70237e+07 0.00588296 1.38001e+07 49.9532 0.00142045 0.98479 0 50.3067 GTEX-1C4CL-1226-SM-7DUFT 1 B1 6 pieces, minimal atherosis 7.3 Blood Vessel Artery - Aorta 0001496 413 653 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993723 348520 0.979232 0.994463 0.853171 21982 1 76 0.00267732 210 0 8.88183e+07 0.0202374 159329 8.93129e+07 7.33564e+06 22000 4.42362e+07 0 0.12606 0.994463 0.848447 8.88183e+07 0.00407936 1.92717e+07 6.26019e+06 1.94077e+07 209 1.9464e+07 1.91568e+07 0.00337782 1.92810e+07 49.7639 0.00178394 0.995202 0 50.1758 GTEX-1C4CL-1426-SM-793CT 1 B1 6 pieces, confirmed target muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 419 647 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994703 252639 0.975773 0.995849 0.823077 22878 1 76 0.00292999 164 0 7.47664e+07 0.0239196 254441 7.5078e+07 1.0737e+07 22898 3.72663e+07 0 0.152695 0.995849 0.819661 7.47664e+07 0.00334671 1.63787e+07 6.83758e+06 1.64668e+07 171 1.6484e+07 1.38648e+07 0.00313811 1.64443e+07 49.9397 0.00338902 0.996996 0 50.1341 GTEX-1C4CL-1526-SM-7MGX4 1 B1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 421 645 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989491 177129 0.972292 0.991921 0.817009 22344 1 76 0.00289564 133 0 6.70812e+07 0.027525 600561 6.76275e+07 5.30298e+06 22366 3.3386e+07 0 0.155283 0.991921 0.810408 6.70812e+07 0.00398792 1.44891e+07 6.70468e+06 1.4653e+07 164 1.46464e+07 9.14248e+06 0.00344044 1.46464e+07 50 0.00888042 0.994351 0 50.2813 GTEX-1C4CL-1626-SM-7DUF3 1 B1 4 pieces, confirmed target muscularis; adherent fat up to ~3mm, rep delineated 7.2 Colon Colon - Sigmoid 0001159 431 635 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993463 401795 0.964968 0.994106 0.785427 23814 1 76 0.00284381 282 0 1.03246e+08 0.0347475 484855 1.03858e+08 9.05811e+06 23856 5.1448e+07 0 0.179542 0.994106 0.780798 1.03246e+08 0.00400879 2.21936e+07 1.55731e+07 2.24723e+07 284 2.24975e+07 1.66841e+07 0.00342592 2.22376e+07 49.7096 0.00466845 0.994749 0 50.312 GTEX-1C4CL-1926-SM-731DY 2 B1 2 pieces spermatogenesis appears adequate 6.5 Testis Testis 0000473 442 624 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.990203 715905 0.921242 0.99208 0.716626 33789 1 76 0.00345734 188 0 9.72406e+07 0.0784254 695885 9.80168e+07 1.1944e+07 33853 4.83808e+07 0 0.204617 0.99208 0.71095 9.72406e+07 0.00399369 2.00356e+07 1.51324e+07 2.00959e+07 185 2.02589e+07 1.62883e+07 0.00372501 2.00293e+07 49.715 0.00709965 0.993958 0 50.0751 GTEX-1C4CL-2026-SM-731EB 1 B1 4 pieces, 3 are glandular/ductal elements (delineated), one piece is squamous mucosa 7.9 Salivary Gland Minor Salivary Gland 0006330 449 617 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.989438 305179 0.973713 0.99123 0.808372 21976 1 76 0.00385021 131 0 5.39281e+07 0.0246152 94777 5.44053e+07 6.66433e+06 21990 2.67801e+07 0 0.165341 0.99123 0.801283 5.39281e+07 0.00434493 1.22744e+07 1.27274e+07 1.24244e+07 122 1.25344e+07 9.51284e+06 0.00409712 1.22584e+07 49.4433 0.00174206 0.993023 0 50.3036 GTEX-1C4CL-2126-SM-7IGQC 2 B1 6 pieces, mucosa up to ~0.3mm, moderately autolyzed 5.9 Colon Colon - Transverse 0001157 450 616 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994992 143636 0.97491 0.995334 0.827575 21751 1 76 0.00229869 114 0 5.01475e+07 0.0243766 427578 5.03826e+07 1.79311e+06 21764 2.49879e+07 0 0.147335 0.995334 0.823713 5.01475e+07 0.00275258 1.11365e+07 5.56857e+06 1.13243e+07 124 1.1294e+07 8.12487e+06 0.00252556 1.11819e+07 49.7507 0.00848662 0.995675 0 50.4179 GTEX-1C64N-0003-SM-7J3A2 B1 Blood Whole Blood 0013756 499 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C64N-0003-SM-7MD4X B1 Blood Whole Blood 0013756 499 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C64N-0005-SM-7PBY7 B1 8.8 Blood Whole Blood 0013756 499 BP-54484 RNA isolation_PAXgene Blood RNA (Manual) 06/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.971836 290578 0.977631 0.976726 0.799533 19605 1 76 0.00319238 118 0 7.84338e+07 0.0213958 325116 8.03027e+07 1.1398e+07 19615 3.89119e+07 0 0.178098 0.976726 0.780925 7.84338e+07 0.00615387 1.80105e+07 8.53578e+07 1.81166e+07 135 1.82384e+07 1.83723e+07 0.00466571 1.82899e+07 50.0705 0.00404863 0.981616 0 50.1468 GTEX-1C64N-0008-SM-EXUR6 B1 7.8 Skin Cells - Cultured fibroblasts EFO_0002009 748 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.992637 681074 0.980269 0.994202 0.858208 19348 1 76 0.00177065 149 0 7.11466e+07 0.0194345 141979 7.15615e+07 2.19373e+06 19360 3.54116e+07 0 0.122061 0.994202 0.853232 7.11466e+07 0.00228704 1.60457e+07 7.31087e+06 1.61177e+07 150 1.62283e+07 1.85388e+07 0.00202844 1.60433e+07 49.7133 0.00198401 0.995767 0 50.112 GTEX-1C64N-0011-R11b-SM-7P8Q6 B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 470 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.99 448385 0.952026 0.99197 0.783714 23777 1 76 0.00372055 270 0 1.07162e+08 0.0476717 3.37682e+06 1.08029e+08 1.6982e+07 23807 5.3314e+07 0 0.168312 0.99197 0.777421 1.07162e+08 0.00405629 2.28182e+07 1.81511e+07 2.35619e+07 283 2.36188e+07 1.01078e+07 0.00388809 2.29434e+07 49.2747 0.0312583 0.99394 0 50.8018 GTEX-1C64N-0011-R1b-SM-7P8Q7 B1, A1 5.6 Brain Brain - Hippocampus 0001954 470 BP-57602 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989389 391600 0.9674 0.991855 0.846222 23831 1 76 0.00349031 373 0 1.28009e+08 0.0324081 1.19207e+07 1.2906e+08 1.77675e+07 23853 6.37088e+07 0 0.121178 0.991855 0.839329 1.28009e+08 0.00483963 2.75278e+07 3.27486e+07 2.85126e+07 337 2.81704e+07 8.55925e+06 0.0041633 2.81061e+07 49.9429 0.0923659 0.994321 0 50.8787 GTEX-1C64N-0011-R6a-SM-7IGO9 B1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 470 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994459 377082 0.972192 0.995199 0.844575 20452 1 76 0.00239333 367 0 7.62486e+07 0.027729 9.23166e+06 7.66164e+07 2.71308e+06 20459 3.7998e+07 0 0.127616 0.995199 0.840521 7.62486e+07 0.00283515 1.62255e+07 3.19259e+07 1.70847e+07 333 1.67968e+07 3.58609e+06 0.00261408 1.65439e+07 49.6207 0.120492 0.995939 0 51.2897 GTEX-1C64N-0011-R7a-SM-7IGOI B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 470 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995118 559224 0.966963 0.995718 0.835408 19895 1 76 0.00239153 366 0 7.90879e+07 0.032952 8.655e+06 7.9428e+07 2.55696e+06 19902 3.94393e+07 0 0.131555 0.995718 0.831831 7.90879e+07 0.00276774 1.66047e+07 4.14841e+07 1.76009e+07 337 1.72283e+07 3.62927e+06 0.00257952 1.70167e+07 49.6911 0.108967 0.996319 0 51.4561 GTEX-1C64N-0011-R8b-SM-7MGXE B1, A1 5.7 Brain Brain - Hypothalamus 0001898 470 BP-56934 RNA isolation_PAXgene Tissue miRNA 10/01/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990668 195032 0.972847 0.993276 0.874105 20296 1 76 0.00313277 196 0 6.4622e+07 0.027053 8.1485e+06 6.50595e+07 4.89954e+06 20302 3.21842e+07 0 0.098741 0.993276 0.868228 6.4622e+07 0.00407105 1.41659e+07 1.64857e+07 1.45492e+07 247 1.43269e+07 3.08053e+06 0.00360068 1.4506e+07 50.3105 0.125247 0.995883 0 50.6673 GTEX-1C64N-0126-SM-793D7 1 B1 5 pieces; ~10% to 20% internal fat; epidermis is ~30 microns thick 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 861 1264 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.991178 318982 0.975126 0.992476 0.805644 23543 1 76 0.00296294 304 0 1.00549e+08 0.024605 554134 1.01311e+08 1.42026e+07 23577 5.00895e+07 0 0.169482 0.992476 0.799582 1.00549e+08 0.00372163 2.2032e+07 1.15269e+07 2.20243e+07 257 2.20806e+07 1.78389e+07 0.00334179 2.21034e+07 50.0258 0.00546962 0.993774 0 49.9912 GTEX-1C64N-0326-SM-7P8QC 1 B1 2 pieces; one contains 10% internal fat and other 5% internal and 5% external fat 8 Muscle Muscle - Skeletal 0011907 863 1262 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991569 403938 0.982032 0.993465 0.867676 20813 1 76 0.00278601 271 0 1.21503e+08 0.0177593 2.18528e+06 1.22303e+08 1.60169e+07 20828 6.05146e+07 0 0.114356 0.993465 0.862005 1.21503e+08 0.00398492 2.62266e+07 2.05095e+07 2.67034e+07 313 2.67891e+07 2.01471e+07 0.00338432 2.6332e+07 49.5697 0.0178679 0.99536 0 50.4504 GTEX-1C64N-0426-SM-7PC31 1 B1 2 pieces; ~20% to 30% internal/external fat (outlined) 6.1 Nerve Nerve - Tibial 0001323 864 1261 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988748 235757 0.971914 0.990849 0.833034 23385 1 76 0.00347975 184 0 7.87931e+07 0.0276229 362826 7.95208e+07 1.25316e+07 23407 3.91619e+07 0 0.138879 0.990849 0.825411 7.87931e+07 0.00448063 1.73087e+07 7.13384e+06 1.74773e+07 185 1.75479e+07 1.44611e+07 0.00397913 1.73984e+07 49.7861 0.00456265 0.992949 0 50.2423 GTEX-1C64N-0526-SM-7PC32 1 B1 2 pieces; well trimmed 6.7 Blood Vessel Artery - Tibial 0007610 865 1260 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989139 395186 0.977319 0.991793 0.863116 21512 1 76 0.00325856 176 0 8.2034e+07 0.022216 509065 8.27129e+07 1.28069e+07 21524 4.07339e+07 0 0.114203 0.991793 0.856033 8.2034e+07 0.00478237 1.75096e+07 6.91444e+06 1.76998e+07 192 1.77727e+07 1.62916e+07 0.00401843 1.76354e+07 49.8061 0.0061546 0.994446 0 50.2701 GTEX-1C64N-0826-SM-7RHGQ 1 B1 2 pieces; one is ~40% fibrous/fatty 6.8 Heart Heart - Atrial Appendage 0006631 882 1243 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990484 179783 0.977759 0.993319 0.821458 22700 1 76 0.00271486 200 0 8.40995e+07 0.0219947 2.63922e+06 8.46652e+07 8.64401e+06 22722 4.18272e+07 0 0.156301 0.993319 0.815969 8.40995e+07 0.00420367 1.84813e+07 8.73154e+06 1.88019e+07 245 1.88099e+07 1.11443e+07 0.00345714 1.86892e+07 49.839 0.0311724 0.996153 0 50.4299 GTEX-1C64N-1026-SM-79ONM 2 B1 2 pieces; some interstitial fibrosis 6.5 Thyroid Thyroid 0002046 891 1234 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.990323 147523 0.964298 0.989212 0.768233 23719 1 76 0.00323993 123 0 5.80827e+07 0.0354113 271035 5.87161e+07 4.20077e+06 23743 2.88635e+07 0 0.196065 0.989212 0.759946 5.80827e+07 0.0044977 1.27243e+07 5.21735e+06 1.26968e+07 130 1.27344e+07 9.13534e+06 0.00386952 1.26299e+07 49.7941 0.00461602 0.988102 0 49.9458 GTEX-1C64N-1326-SM-7SB7D 1 B1 2 pieces; mature adipose tissue, few central defects (? adequate fixation) 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 900 1225 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990136 172943 0.968323 0.992136 0.719706 23827 1 76 0.00310326 140 0 7.05712e+07 0.0313749 541592 7.11305e+07 7.93635e+06 23867 3.50908e+07 0 0.248617 0.992136 0.714046 7.05712e+07 0.00434938 1.53749e+07 8.9815e+06 1.55897e+07 155 1.55965e+07 9.28901e+06 0.00372507 1.55061e+07 49.8546 0.00761406 0.994137 0 50.3469 GTEX-1C64N-2226-SM-7SB7C 1 B1 6 pieces; well trimmed target muscularis 6.7 Colon Colon - Sigmoid 0001159 945 1180 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990356 253145 0.958267 0.992688 0.741291 24230 1 76 0.00292964 157 0 8.47214e+07 0.0415279 839928 8.53454e+07 1.02243e+07 24272 4.21412e+07 0 0.216976 0.992688 0.735871 8.47214e+07 0.00425363 1.78802e+07 1.21033e+07 1.81253e+07 193 1.81255e+07 1.13834e+07 0.00359008 1.80718e+07 49.9258 0.00984151 0.995021 0 50.3404 GTEX-1C64N-2626-SM-7PC2N 1 B1 6 pieces; ~10% to 15% internal fat on 4 of 6 pieces (outlined), few tissue defects 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 946 1179 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989346 327371 0.980117 0.99189 0.825676 22592 1 76 0.00353706 186 0 7.99682e+07 0.0195992 546102 8.06221e+07 1.25828e+07 22613 3.9737e+07 0 0.154441 0.99189 0.81898 7.99682e+07 0.00458209 1.74688e+07 9.50103e+06 1.76922e+07 189 1.77561e+07 1.35332e+07 0.00405824 1.76024e+07 49.7826 0.00677361 0.994434 0 50.3177 GTEX-1C64N-2826-SM-7IGP5 2 B1 2 pieces; spermatogenesis present but decreased; congestion 5.8 Testis Testis 0000473 980 1145 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.992317 334514 0.908503 0.992743 0.68881 31735 1 76 0.00206412 143 0 6.54026e+07 0.0911742 884120 6.58807e+07 2.40189e+06 31791 3.2584e+07 0 0.219693 0.992743 0.683812 6.54026e+07 0.00264686 1.31427e+07 1.00817e+07 1.32591e+07 135 1.32822e+07 9.27567e+06 0.00235536 1.31414e+07 49.7337 0.01342 0.993169 0 50.2205 GTEX-1C64N-2926-SM-79OLM 1 B1 2 pieces; ~5% to 10% internal fat (outlined) 7 Salivary Gland Minor Salivary Gland 0006330 981 1144 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.978664 224226 0.968473 0.982499 0.75816 23754 1 76 0.00496541 149 0 6.38188e+07 0.0305766 245890 6.49556e+07 1.44391e+07 23782 3.17006e+07 0 0.210313 0.982499 0.744891 6.38188e+07 0.00625817 1.42671e+07 1.12045e+07 1.43981e+07 141 1.44963e+07 9.14653e+06 0.00560927 1.4403e+07 49.8386 0.00378551 0.986334 0 50.2284 GTEX-1C64N-3026-SM-7MGVU 1 B1 2 pieces; moderate autolysis 5.7 Brain Brain - Cortex 0001870 1029 1096 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991433 286895 0.970391 0.994024 0.863488 21866 1 76 0.00295519 263 0 7.58259e+07 0.0293915 6.05437e+06 7.62818e+07 5.98077e+06 21877 3.77626e+07 0 0.106903 0.994024 0.858327 7.58259e+07 0.00382583 1.65308e+07 1.85183e+07 1.70278e+07 289 1.68214e+07 5.93755e+06 0.00338938 1.68832e+07 50.0917 0.0793685 0.996614 0 50.7405 GTEX-1C64N-3126-SM-79OO3 1 B1 2 pieces; Purkinje cells observed 6.5 Brain Brain - Cerebellum 0002037 1031 1094 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991499 452649 0.936075 0.992323 0.708725 23086 1 76 0.00344989 105 0 6.36387e+07 0.0635917 1.03478e+06 6.41311e+07 3.46800e+06 23105 3.1697e+07 0 0.22735 0.992323 0.703284 6.36387e+07 0.00470101 1.35812e+07 1.79758e+07 1.37473e+07 135 1.37698e+07 7.07231e+06 0.00407493 1.36052e+07 49.6994 0.0161354 0.993146 0 50.3038 GTEX-1C64N-3226-SM-7P8SN 2 B1 1 piece; mildly to moderately autolyzed adenohypophysis and neurohypophysis 6.1 Pituitary Pituitary 0000007 1032 1093 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.924839 402331 0.962019 0.959224 0.72206 26782 1 76 0.00461876 131 0 7.9245e+07 0.0377319 2.23902e+06 8.26136e+07 1.29703e+07 26820 3.80526e+07 0 0.239958 0.959224 0.692618 7.9245e+07 0.00950625 1.66718e+07 1.01503e+07 1.67255e+07 156 1.81753e+07 8.94507e+06 0.0069749 1.79106e+07 49.6333 0.0271023 0.99361 0 50.0804 GTEX-1C64O-0003-SM-DINCB B1 Blood Whole Blood 0013756 -36 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1C64O-0003-SM-DJWXT B1 Blood Whole Blood 0013756 -36 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1C64O-0006-SM-7PC22 B1 7.8 Blood Whole Blood 0013756 -36 BP-54484 RNA isolation_PAXgene Blood RNA (Manual) 06/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986333 926211 0.960679 0.989937 0.835813 19192 1 76 0.00394708 158 0 8.48343e+07 0.0387479 1.01335e+06 8.56967e+07 1.33308e+07 19201 4.20818e+07 0 0.124866 0.989937 0.827403 8.48343e+07 0.00583999 1.84959e+07 3.60961e+07 1.85765e+07 170 1.87137e+07 1.7238e+07 0.00489009 1.86765e+07 49.9504 0.0118248 0.993542 0 50.1087 GTEX-1C64O-0008-SM-EXUR5 B1 7.9 Skin Cells - Cultured fibroblasts EFO_0002009 436 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/20/2017 TruSeq.v1 RNASEQ 0.994139 713029 0.981125 0.994788 0.853233 20559 1 76 0.00157897 190 0 8.89188e+07 0.0185291 302170 8.93846e+07 2.34054e+06 20578 4.43052e+07 0 0.127892 0.994788 0.848786 8.89188e+07 0.00207849 1.98201e+07 8.44358e+06 2.00554e+07 191 2.00815e+07 2.29757e+07 0.00182856 1.98513e+07 49.7118 0.00338056 0.995437 0 50.295 GTEX-1C64O-0126-SM-7SB8P 0 B1 6 pieces, no dermal fat; squamous epithelium is ~20-30 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 437 635 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988616 225882 0.958772 0.991548 0.67465 24043 1 76 0.00321341 124 0 5.71505e+07 0.0410427 636199 5.76376e+07 6.91208e+06 24082 2.84085e+07 0 0.284122 0.991548 0.668948 5.71505e+07 0.00466756 1.23268e+07 9.07634e+06 1.24918e+07 119 1.25122e+07 7.42531e+06 0.00393834 1.24682e+07 49.9118 0.0110379 0.99448 0 50.3324 GTEX-1C64O-0226-SM-73KXB 0 B1 2 pieces, fascia/vascular elements are ~10-15% of tissue 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 440 632 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.992894 239742 0.976068 0.994148 0.800383 22555 1 76 0.00284334 161 0 7.56221e+07 0.0236568 670860 7.60672e+07 7.70965e+06 22582 3.76723e+07 0 0.175685 0.994148 0.795699 7.56221e+07 0.00347516 1.65958e+07 7.32133e+06 1.66525e+07 170 1.66749e+07 1.33337e+07 0.00315885 1.66667e+07 49.9876 0.00881931 0.995403 0 50.0853 GTEX-1C64O-0326-SM-73KVW 0 B1 2 pieces, interstitial fat/vascular elements are ~10% of tissue 8.5 Muscle Muscle - Skeletal 0011907 447 625 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.993634 260354 0.982294 0.994439 0.87338 20568 1 76 0.00440704 282 0 9.8746e+07 0.0174613 1.60971e+06 9.92982e+07 4.07139e+06 20582 4.92093e+07 0 0.108914 0.994439 0.868524 9.8746e+07 0.00424352 2.12777e+07 1.29755e+07 2.17201e+07 266 2.16281e+07 1.91306e+07 0.00432535 2.14407e+07 49.7824 0.0162109 0.995244 0 50.5144 GTEX-1C64O-0426-SM-7SB8Q 0 B1 2 pieces, minimal adherent fat 6.6 Nerve Nerve - Tibial 0001323 457 615 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988606 271741 0.952547 0.991259 0.579045 24589 1 76 0.00313492 138 0 6.01037e+07 0.0472218 300092 6.06337e+07 6.79607e+06 24643 2.98691e+07 0 0.373502 0.991259 0.573984 6.01037e+07 0.00476074 1.30114e+07 7.53598e+06 1.31319e+07 118 1.31638e+07 6.72529e+06 0.00394565 1.31326e+07 49.9405 0.00494926 0.993911 0 50.2306 GTEX-1C64O-0526-SM-793D6 0 B1 2 pieces, no atherosis or adherent fat 7.6 Blood Vessel Artery - Tibial 0007610 460 612 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6379,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.993858 376378 0.977055 0.995199 0.865573 20412 1 76 0.00274966 174 0 7.95462e+07 0.0225458 520094 7.993e+07 9.58967e+06 20424 3.9626e+07 0 0.111482 0.995199 0.861417 7.95462e+07 0.00348818 1.68798e+07 5.78524e+06 1.70159e+07 188 1.69772e+07 1.65045e+07 0.00311842 1.70185e+07 50.0606 0.00650687 0.99654 0 50.2008 GTEX-1C64O-0626-SM-7DHL1 0 B1 1 piece, ~99% glandular parenchyma, good specimen 8 Salivary Gland Minor Salivary Gland 0006330 473 599 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990368 177267 0.972544 0.991628 0.774995 24687 1 76 0.00393566 167 0 8.53359e+07 0.0270568 346590 8.60564e+07 6.74113e+06 24724 4.24602e+07 0 0.197549 0.991628 0.768507 8.53359e+07 0.00566967 1.88309e+07 8.30827e+06 1.89937e+07 172 1.90234e+07 1.51609e+07 0.00480156 1.88986e+07 49.8354 0.00402748 0.992888 0 50.2152 GTEX-1C64O-0726-SM-7DUFU 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 7.5 Breast Breast - Mammary Tissue 0008367 500 572 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992393 310723 0.969447 0.993065 0.747193 24708 1 76 0.00302086 171 0 8.32859e+07 0.0302337 360280 8.38675e+07 7.56184e+06 24757 4.14702e+07 0 0.222253 0.993065 0.742012 8.32859e+07 0.00421242 1.82853e+07 7.74877e+06 1.83535e+07 175 1.8424e+07 1.39121e+07 0.00361623 1.82692e+07 49.789 0.00429583 0.993737 0 50.0931 GTEX-1C64O-0826-SM-79OKZ 1 B1 2 pieces, minimal interstitial fibrosis;ischemic change 7.1 Heart Heart - Left Ventricle 0006566 506 566 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977612 180348 0.980191 0.981294 0.825436 20218 1 76 0.00618829 107 0 6.01277e+07 0.019683 2.50157e+06 6.12739e+07 1.44928e+07 20230 2.99268e+07 0 0.154755 0.981294 0.809996 6.01277e+07 0.00732237 1.286e+07 1.07941e+07 1.30714e+07 133 1.30895e+07 7.67366e+06 0.0067532 1.30235e+07 49.8736 0.0408261 0.984977 0 50.4075 GTEX-1C64O-0926-SM-79OLN 1 B1 2 pieces, no abnormalities 7 Heart Heart - Atrial Appendage 0006631 516 556 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.980048 164090 0.977197 0.983528 0.826761 20888 1 76 0.00589107 107 0 5.8504e+07 0.0221718 2.05132e+06 5.94838e+07 1.26014e+07 20903 2.91139e+07 0 0.150436 0.983528 0.813143 5.8504e+07 0.00701519 1.22776e+07 1.01178e+07 1.24708e+07 130 1.24668e+07 7.54507e+06 0.00645114 1.24443e+07 49.9549 0.0344854 0.987009 0 50.3903 GTEX-1C64O-1026-SM-7PC3L 1 B1 6 pieces, no abnormalities 8.3 Blood Vessel Artery - Aorta 0001496 522 550 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988371 673849 0.976942 0.991667 0.825341 23207 1 76 0.00336449 282 0 1.07975e+08 0.0225987 363265 1.08882e+08 1.69531e+07 23237 5.36005e+07 0 0.151601 0.991667 0.818463 1.07975e+08 0.00514001 2.31686e+07 8.62848e+06 2.33306e+07 267 2.35173e+07 2.16605e+07 0.0042493 2.33193e+07 49.7886 0.0033363 0.994962 0 50.1742 GTEX-1C64O-1126-SM-7IGMY 1 B1 2 pieces, up to 0.7mm rim of adherent fat 6.2 Blood Vessel Artery - Coronary 0001621 529 543 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994991 177301 0.975517 0.995681 0.839436 21121 1 76 0.0021558 158 0 7.12502e+07 0.0241373 579629 7.15592e+07 4.45283e+06 21139 3.55217e+07 0 0.136081 0.995681 0.835811 7.12502e+07 0.00288 1.51771e+07 5.27189e+06 1.53456e+07 168 1.52621e+07 1.36491e+07 0.00251765 1.53088e+07 50.0764 0.0081 0.996372 0 50.2759 GTEX-1C64O-1226-SM-79OOC 1 B1 2 pieces, moderate congestion/atalectasis 6.6 Lung Lung 0008952 537 535 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993209 131972 0.970475 0.99326 0.776056 23361 1 76 0.00343158 119 0 5.83839e+07 0.0291525 433475 5.87801e+07 3.37329e+06 23392 2.90764e+07 0 0.194419 0.99326 0.770826 5.83839e+07 0.004676 1.27983e+07 4.86502e+06 1.28795e+07 127 1.28585e+07 9.40052e+06 0.00405376 1.28199e+07 49.9249 0.00737452 0.993312 0 50.1581 GTEX-1C64O-1326-SM-7MGWR 0 B1 6 pieces, focal, minimal dermal fat, delineated; squamus epithelium is ~40 microns 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 540 532 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990253 204442 0.969575 0.992365 0.765404 23674 1 76 0.00324255 140 0 6.72472e+07 0.0302371 1.28514e+06 6.77646e+07 5.37202e+06 23698 3.34862e+07 0 0.204172 0.992365 0.75956 6.72472e+07 0.00409022 1.47025e+07 8.89316e+06 1.48149e+07 146 1.48131e+07 9.59171e+06 0.00366548 1.48362e+07 50.0391 0.0189648 0.994477 0 50.1903 GTEX-1C64O-1426-SM-7EWER 1 B1 2 pieces, mild-moderate saponification. Islets rare, rep delineated, early degnerative changes 6.3 Pancreas Pancreas 0001150 547 525 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992617 134365 0.973759 0.994554 0.81283 21410 1 76 0.00265232 101 0 5.85109e+07 0.0260928 268079 5.88313e+07 5.36213e+06 21428 2.91415e+07 0 0.160929 0.994554 0.808403 5.85109e+07 0.00380017 1.32379e+07 1.10448e+07 1.33563e+07 106 1.33799e+07 1.43824e+07 0.00322512 1.33238e+07 49.895 0.00455674 0.99649 0 50.2226 GTEX-1C64O-1526-SM-7EWES 1 B1 2 pieces, ~10% fascia/vascular elements; rep delineated 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 548 524 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 EXCLUDE 0.990763 129962 0.964713 0.992614 0.688453 23746 1 76 0.00297064 115 0 5.73824e+07 0.0345667 350464 5.78093e+07 4.97759e+06 23787 2.85479e+07 0 0.27626 0.992614 0.683368 5.73824e+07 0.00398033 1.25797e+07 6.25581e+06 1.26213e+07 116 1.26529e+07 7.80971e+06 0.00347455 1.26448e+07 49.984 0.00606241 0.994466 0 50.0825 GTEX-1C64O-1626-SM-731EN 1 B1 2 pieces, moderate congestion 5.6 Spleen Spleen 0002106 553 519 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6196 12/20/2014 TruSeq.v1 RNASEQ 0.989495 249612 0.959985 0.991109 0.742552 23788 1 76 0.00400688 124 0 6.5494e+07 0.0390779 533678 6.60815e+07 8.46461e+06 23824 3.25409e+07 0 0.217434 0.991109 0.735949 6.5494e+07 0.00446207 1.43298e+07 9.41155e+06 1.44118e+07 137 1.4478e+07 9.37498e+06 0.0042341 1.43645e+07 49.8033 0.00807605 0.992722 0 50.1427 GTEX-1C64O-1726-SM-73KW9 1 B1 6 pieces ~60% target muscularis, contaminant fat/fascia, mucus glands present, rep. delineated 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 563 509 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.989681 242558 0.968828 0.991012 0.759574 23893 1 76 0.00443919 176 0 9.18269e+07 0.0309399 988623 9.26598e+07 4.46209e+06 23924 4.56769e+07 0 0.209255 0.991012 0.752747 9.18269e+07 0.00472033 1.98328e+07 8.42081e+06 2.00214e+07 191 2.00014e+07 1.3922e+07 0.00457957 1.99725e+07 49.9638 0.0106694 0.992343 0 50.2367 GTEX-1C64O-1826-SM-7DHM4 1 B1 6 pieces, squamous mucosa up to ~0.5mm, submucosal mucusa glands present, rep delineated 8.1 Esophagus Esophagus - Mucosa 0006920 574 498 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.98951 166716 0.968155 0.990851 0.763509 23090 1 76 0.00403113 147 0 8.08731e+07 0.0314089 346718 8.16199e+07 6.62593e+06 23114 4.02437e+07 0 0.204647 0.990851 0.756523 8.08731e+07 0.00582045 1.79676e+07 1.06173e+07 1.81251e+07 157 1.81685e+07 1.46014e+07 0.00492458 1.80284e+07 49.8065 0.00424796 0.992191 0 50.2182 GTEX-1C64O-1926-SM-79ONP 1 B1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 602 470 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993321 138350 0.971248 0.993538 0.810746 22025 1 76 0.00332781 142 0 6.89577e+07 0.0285194 819545 6.94062e+07 3.94227e+06 22045 3.4355e+07 0 0.160502 0.993538 0.805507 6.89577e+07 0.00456378 1.4778e+07 5.83784e+06 1.48841e+07 155 1.48405e+07 1.11818e+07 0.00394566 1.48347e+07 49.9902 0.011808 0.993756 0 50.1789 GTEX-1C64O-2026-SM-7IGPA 2 B1 2 pieces, glandular elements with autolysis ranging from score 1 to score 3 5.9 Prostate Prostate 0002367 588 484 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994218 144044 0.959403 0.994355 0.760974 24108 1 76 0.00237937 137 0 6.54511e+07 0.0404026 1.6497e+06 6.58227e+07 3.03729e+06 24136 3.26102e+07 0 0.198429 0.994355 0.756679 6.54511e+07 0.00287936 1.41291e+07 7.24825e+06 1.43916e+07 159 1.43615e+07 8.15185e+06 0.00262933 1.41746e+07 49.6724 0.0250628 0.994492 0 50.4603 GTEX-1C64O-2126-SM-7IGPB 2 B1 2 pieces, moderately autolyzed; spermatogenesis appears reduced 5.8 Testis Testis 0000473 594 478 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993561 221204 0.921773 0.993839 0.712177 31180 1 76 0.00225782 128 0 5.76676e+07 0.0779176 886153 5.80251e+07 2.13153e+06 31227 2.8743e+07 0 0.209596 0.993839 0.707789 5.76676e+07 0.00273145 1.18126e+07 7.87546e+06 1.19301e+07 117 1.19415e+07 8.92682e+06 0.00249457 1.1816e+07 49.7358 0.0152719 0.994117 0 50.2474 GTEX-1C64O-2226-SM-73KTV 2 B1 6 pieces, mucosa up to ~0.6mm, moderately advanced autolysis 8.2 Stomach Stomach 0000945 597 475 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991378 281892 0.975144 0.992507 0.812192 23292 1 76 0.00427158 183 0 8.52873e+07 0.0245176 676410 8.59312e+07 3.9844e+06 23317 4.24423e+07 0 0.162951 0.992507 0.806106 8.52873e+07 0.00441285 1.85404e+07 7.10437e+06 1.86722e+07 184 1.86848e+07 1.52281e+07 0.00434214 1.86235e+07 49.9177 0.00787153 0.993636 0 50.1771 GTEX-1C64O-2326-SM-73KU8 1 B1 6 pieces, mucosa fairly well preserved, up to ~0.3-0.4mm 7.3 Colon Colon - Transverse 0001157 604 468 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.991412 448872 0.976104 0.992574 0.821325 24015 1 76 0.00441009 224 0 9.66227e+07 0.0235921 1.51248e+06 9.73456e+07 4.32982e+06 24045 4.80802e+07 0 0.154779 0.992574 0.815226 9.66227e+07 0.00461751 2.09462e+07 1.01578e+07 2.11333e+07 227 2.12257e+07 1.62113e+07 0.00451368 2.09644e+07 49.6903 0.0155372 0.993736 0 50.2224 GTEX-1C64O-2426-SM-7P8R3 1 B1 6 pieces, target muscularis, ~10% 'contaminant mucosa up to ~0.3mm, rep delineated 7 Colon Colon - Sigmoid 0001159 609 463 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.986555 476378 0.972249 0.988537 0.789265 25126 1 76 0.00378757 287 0 1.0656e+08 0.0271092 2.8065e+06 1.07796e+08 1.56647e+07 25171 5.30011e+07 0 0.182983 0.988537 0.780218 1.0656e+08 0.00448632 2.30024e+07 1.53392e+07 2.34967e+07 268 2.3626e+07 1.43542e+07 0.00413624 2.30652e+07 49.3995 0.0260353 0.990519 0 50.5315 GTEX-1C64O-2526-SM-79ONO 2 B1 6 pieces, ~30% target lymphoid aggregates, rep delineated;glandular elements of mucosa largely autolyzed 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 612 460 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993627 118982 0.974091 0.993502 0.814929 23308 1 76 0.00351507 123 0 6.00777e+07 0.0254067 690871 6.04706e+07 3.36396e+06 23324 2.99146e+07 0 0.159162 0.993502 0.809634 6.00777e+07 0.00477597 1.31901e+07 5.52333e+06 1.32479e+07 137 1.32458e+07 9.75118e+06 0.0041456 1.31838e+07 49.8826 0.0114249 0.993377 0 50.1092 GTEX-1C64O-5004-SM-AN46A B1 Muscle Muscle - Skeletal 0011907 452 ChIP-Seq GTEX-1C64O-5007-SM-AN46B B1 Heart Heart - Left Ventricle 0006566 507 ChIP-Seq GTEX-1C6VQ-0003-SM-7MA5K C1 Blood Whole Blood 0013756 787 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C6VQ-0005-SM-7P8OR C1 8.2 Blood Whole Blood 0013756 787 BP-54484 RNA isolation_PAXgene Blood RNA (Manual) 06/30/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.928332 161991 0.991471 0.930234 0.822147 14898 1 76 0.00264208 96 0 1.01546e+08 0.00574948 77590 1.09162e+08 1.32005e+07 14899 5.04228e+07 0 0.169325 0.930234 0.764788 1.01546e+08 0.00441529 2.49813e+07 2.40652e+08 2.47119e+07 155 2.47286e+07 3.16314e+07 0.00352687 2.51629e+07 50.4353 0.000710778 0.932136 0 49.7289 GTEX-1C6VQ-0008-SM-EXUR8 C1 8.4 Skin Cells - Cultured fibroblasts EFO_0002009 897 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.993714 707994 0.976593 0.994427 0.844915 19841 1 76 0.00144737 139 0 6.67692e+07 0.0230735 264333 6.71434e+07 1.5724e+06 19859 3.32586e+07 0 0.131678 0.994427 0.840206 6.67692e+07 0.00194634 1.49724e+07 8.85994e+06 1.50923e+07 139 1.51452e+07 1.70865e+07 0.00169667 1.49697e+07 49.7086 0.00393684 0.99514 0 50.1994 GTEX-1C6VQ-0011-R10b-SM-7P8Q1 C1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 801 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.984683 722807 0.959939 0.987578 0.842578 22721 1 76 0.00294082 267 0 1.10009e+08 0.0398429 1.08973e+07 1.11392e+08 1.52773e+07 22742 5.4708e+07 0 0.117361 0.987578 0.832112 1.10009e+08 0.00440809 2.36137e+07 3.96919e+07 2.44279e+07 328 2.43656e+07 9.03228e+06 0.0036723 2.39284e+07 49.5473 0.097828 0.990472 0 50.8473 GTEX-1C6VQ-0011-R1a-SM-7P8Q2 C1, A1 5.8 Brain Brain - Hippocampus 0001954 801 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.985496 612833 0.957183 0.987829 0.83243 22241 1 76 0.00318753 267 0 8.91821e+07 0.0426265 8.33179e+06 9.02809e+07 1.27734e+07 22259 4.43647e+07 0 0.124753 0.987829 0.822299 8.91821e+07 0.0039391 1.88492e+07 3.53302e+07 2.01165e+07 315 1.99397e+07 5.31599e+06 0.00356243 1.91792e+07 49.028 0.0922874 0.990162 0 51.6262 GTEX-1C6VQ-0011-R9a-SM-7SB85 C1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 801 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990597 1.22647e+06 0.922361 0.992935 0.762646 22315 1 76 0.00256894 195 0 7.26949e+07 0.0772492 2.19816e+06 7.32122e+07 8.54968e+06 22333 3.61548e+07 0 0.159715 0.992935 0.757258 7.26949e+07 0.00398185 1.5431e+07 3.71310e+07 1.59922e+07 184 1.57856e+07 9.6107e+06 0.00327373 1.5834e+07 50.0765 0.0300245 0.995273 0 50.893 GTEX-1C6VQ-0126-SM-7P8RI 1 C1 6 pieces; minimal internal fat, epidermis measures 43 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 896 782 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.932653 363061 0.971064 0.963658 0.815442 25155 1 76 0.00425796 163 0 8.23354e+07 0.0286351 430615 8.54405e+07 1.28446e+07 25180 3.97145e+07 0 0.155622 0.963658 0.785808 8.23354e+07 0.0090664 1.74159e+07 1.20811e+07 1.75686e+07 166 1.88850e+07 1.52386e+07 0.00658483 1.86776e+07 49.7239 0.00503994 0.994664 0 50.2182 GTEX-1C6VQ-0226-SM-7P8S5 1 C1 2 pieces; mature fat with up to 20% loose fibrous tissue 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 898 781 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.948946 248960 0.972167 0.971772 0.777796 24478 1 76 0.0044816 165 0 8.36888e+07 0.0275147 263564 8.61198e+07 1.35937e+07 24505 4.07392e+07 0 0.194371 0.971772 0.75584 8.36888e+07 0.00740253 1.7859e+07 9.94534e+06 1.80182e+07 166 1.90183e+07 1.53707e+07 0.00590776 1.87494e+07 49.644 0.00306043 0.994598 0 50.2218 GTEX-1C6VQ-0326-SM-7DHMS 1 C1 2 pieces; 1 piece includes ~10% fat (mostly internal), few atrophic fibers 8.4 Muscle Muscle - Skeletal 0011907 915 764 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991613 140547 0.981987 0.992905 0.850368 21012 1 76 0.00330644 175 0 7.69267e+07 0.0177528 445861 7.74764e+07 5.86396e+06 21029 3.83178e+07 0 0.131619 0.992905 0.844334 7.69267e+07 0.0049807 1.69746e+07 7.61311e+06 1.71882e+07 175 1.72292e+07 1.6407e+07 0.00414248 1.70236e+07 49.6999 0.0057548 0.994197 0 50.3126 GTEX-1C6VQ-0426-SM-79OOX 0 C1 2 pieces; predominantly fat, up to 10% fibrocollagenous stroma, no ductal elements 6.6 Breast Breast - Mammary Tissue 0008367 923 756 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991666 121914 0.974643 0.991452 0.75323 22365 1 76 0.00310565 120 0 6.19439e+07 0.025112 225484 6.24779e+07 3.80918e+06 22389 3.08322e+07 0 0.221413 0.991452 0.746792 6.19439e+07 0.00430188 1.36623e+07 6.32844e+06 1.37019e+07 137 1.37034e+07 9.6623e+06 0.0037039 1.36518e+07 49.9055 0.00360902 0.991239 0 50.0722 GTEX-1C6VQ-0526-SM-7MGWD 2 C1 2 pieces; mild fibrosis with vague nodularity 5.6 Thyroid Thyroid 0002046 925 755 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989943 147023 0.974134 0.992317 0.799459 23374 1 76 0.00267028 160 0 7.59208e+07 0.0255048 458511 7.65086e+07 6.11254e+06 23401 3.78018e+07 0 0.174675 0.992317 0.793317 7.59208e+07 0.00362743 1.67133e+07 7.70203e+06 1.68354e+07 167 1.68946e+07 1.43975e+07 0.00314771 1.68275e+07 49.9005 0.00599293 0.99469 0 50.182 GTEX-1C6VQ-0626-SM-7EPHE 1 C1 2 pieces; includes small portion of fat, up to 10% in 1 piece 6.8 Nerve Nerve - Tibial 0001323 926 754 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989896 272438 0.967872 0.991972 0.754864 24643 1 76 0.00308523 152 0 9.56086e+07 0.0318144 276267 9.63824e+07 1.30378e+07 24693 4.75707e+07 0 0.213008 0.991972 0.748804 9.56086e+07 0.0116824 2.09799e+07 9.70805e+06 2.11161e+07 162 2.11643e+07 1.58675e+07 0.00737483 2.11194e+07 49.9469 0.00286636 0.994048 0 50.1617 GTEX-1C6VQ-0726-SM-7EPI6 1 C1 2 pieces; well trimmed 6.8 Blood Vessel Artery - Tibial 0007610 926 755 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99047 145380 0.97502 0.992814 0.821243 22011 1 76 0.00298388 145 0 9.20639e+07 0.0246015 438111 9.27303e+07 1.23347e+07 22032 4.5829e+07 0 0.153777 0.992814 0.815341 9.20639e+07 0.01165 1.98861e+07 8.98478e+06 2.00557e+07 162 2.00674e+07 1.79709e+07 0.00730673 2.00774e+07 50.0124 0.00472457 0.995158 0 50.2122 GTEX-1C6VQ-0826-SM-7PBZT 1 C1 2 pieces; interstitial fibrosis, 25% of 1 piece is fat 6.5 Heart Heart - Atrial Appendage 0006631 934 747 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988707 214689 0.980236 0.992441 0.810911 23188 1 76 0.00264221 270 0 1.21113e+08 0.0195728 3.5205e+06 1.22035e+08 1.6632e+07 23217 6.02153e+07 0 0.169326 0.992441 0.804781 1.21113e+08 0.00472111 2.60469e+07 2.25848e+07 2.61339e+07 330 2.63027e+07 1.62304e+07 0.00367775 2.62641e+07 49.9633 0.0288483 0.996175 0 50.0833 GTEX-1C6VQ-1126-SM-7EWET 1 C1 2 pieces; some patchy increased eosinophilia (?recent ischemia) 6.3 Heart Heart - Left Ventricle 0006566 944 739 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991624 101836 0.98543 0.993772 0.850095 18277 1 76 0.0020085 148 0 5.50136e+07 0.0144924 4.18359e+06 5.53583e+07 4.87318e+06 18282 2.7381e+07 0 0.135336 0.993772 0.844801 5.50136e+07 0.0033244 1.21293e+07 1.6845e+07 1.24564e+07 197 1.22733e+07 3.19402e+06 0.00266503 1.23878e+07 50.232 0.0755729 0.99592 0 50.6653 GTEX-1C6VQ-1226-SM-73KYD 1 C1 6 pieces; well trimmed with minimal internal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 945 739 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.993378 241634 0.976701 0.994595 0.751337 23046 1 76 0.00269733 186 0 8.22371e+07 0.0230197 456873 8.2684e+07 8.32703e+06 23083 4.09721e+07 0 0.225364 0.994595 0.747276 8.22371e+07 0.00328778 1.81742e+07 9.17835e+06 1.81667e+07 178 1.82141e+07 1.39037e+07 0.0029922 1.82258e+07 50.016 0.00552553 0.995813 0 49.9897 GTEX-1C6VQ-1326-SM-7939X 1 C1 6 pieces; mild atherosclerosis 7.9 Blood Vessel Artery - Aorta 0001496 947 739 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.990737 316363 0.973084 0.991639 0.72536 21505 1 76 0.00251381 122 0 5.73753e+07 0.0265001 89644 5.78591e+07 4.40176e+06 21531 2.84911e+07 0 0.247723 0.991639 0.719295 5.73753e+07 0.0031648 1.24864e+07 4.7714e+06 1.24218e+07 124 1.25361e+07 9.69285e+06 0.00283901 1.2427e+07 49.7815 0.00154935 0.99254 0 49.8703 GTEX-1C6VQ-1426-SM-73KTW 1 C1 2 pieces; increased peritubular fibrosis, reduced/absent spermatogenesis 7 Testis Testis 0000473 948 738 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 EXCLUDE 0.990515 294818 0.957201 0.991598 0.686723 28384 1 76 0.00423858 164 0 9.60042e+07 0.0425553 1.42169e+06 9.68176e+07 4.25286e+06 28455 4.77653e+07 0 0.270477 0.991598 0.680954 9.60042e+07 0.00429328 2.09427e+07 9.5103e+06 2.10666e+07 192 2.11018e+07 1.2989e+07 0.0042659 2.10109e+07 49.8921 0.0146842 0.992682 0 50.1474 GTEX-1C6VQ-1526-SM-73KU9 1 C1 2 pieces 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 949 738 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.9888 288571 0.974518 0.989532 0.763886 24342 1 76 0.00413786 194 0 9.47303e+07 0.025175 259813 9.57324e+07 4.54118e+06 24376 4.70856e+07 0 0.210632 0.989532 0.755889 9.47303e+07 0.00436079 2.09447e+07 9.92749e+06 2.09899e+07 203 2.1024e+07 1.60302e+07 0.00424924 2.0988e+07 49.9571 0.00271395 0.990264 0 50.0539 GTEX-1C6VQ-1626-SM-79OO1 1 C1 2 pieces; severe macrovesicular steatosis, centrilobular congestion, fibrosis 6.6 Liver Liver 0001114 951 736 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993105 203259 0.976043 0.992946 0.806769 20741 1 76 0.00302708 120 0 6.02791e+07 0.0237965 949137 6.07073e+07 3.71577e+06 20759 3.00102e+07 0 0.169273 0.992946 0.801078 6.02791e+07 0.0042852 1.32772e+07 7.78609e+06 1.33838e+07 141 1.33859e+07 9.98042e+06 0.00365624 1.32636e+07 49.7706 0.0156346 0.992787 0 50.2 GTEX-1C6VQ-1726-SM-7IGLQ 2 C1 2 pieces; includes 20-30% fat (attached and internal), some fibrosis 6.1 Pancreas Pancreas 0001150 952 736 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993029 423904 0.969716 0.993965 0.800494 23169 1 76 0.00239315 158 0 1.04795e+08 0.0300351 827559 1.05431e+08 6.97345e+06 23201 5.22103e+07 0 0.169222 0.993965 0.795663 1.04795e+08 0.00305642 2.36036e+07 2.65956e+07 2.40648e+07 181 2.39824e+07 2.58609e+07 0.00272447 2.37939e+07 49.8027 0.00784928 0.994901 0 50.4838 GTEX-1C6VQ-1826-SM-7EWEH 2 C1 6 pieces; squamous epithelium is partially sloughed 6.5 Esophagus Esophagus - Mucosa 0006920 953 736 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992057 179403 0.976242 0.993906 0.772294 21306 1 76 0.00230343 120 0 5.80361e+07 0.0235451 376564 5.83919e+07 5.15152e+06 21323 2.88874e+07 0 0.203948 0.993906 0.767588 5.80361e+07 0.00346173 1.3053e+07 6.77187e+06 1.31174e+07 134 1.31312e+07 9.30893e+06 0.0028815 1.3146e+07 50.0281 0.0064489 0.995755 0 50.123 GTEX-1C6VQ-1926-SM-7MGVR 1 C1 6 pieces; target muscularis 7 Esophagus Esophagus - Muscularis 0004648 954 735 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991222 141389 0.971841 0.993184 0.769936 23509 1 76 0.00271352 160 0 7.76198e+07 0.0279194 1.24961e+06 7.81524e+07 6.03098e+06 23534 3.8649e+07 0 0.201905 0.993184 0.764689 7.76198e+07 0.00347585 1.6987e+07 8.02622e+06 1.71138e+07 189 1.71093e+07 1.08837e+07 0.00309393 1.71394e+07 50.0439 0.0159894 0.995147 0 50.1858 GTEX-1C6VQ-2026-SM-79OOH 1 C1 6 pieces; target muscularis 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 955 735 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991098 132774 0.975565 0.990504 0.757644 21620 1 76 0.00313933 117 0 6.02544e+07 0.0242185 827380 6.0832e+07 4.09359e+06 21642 2.99652e+07 0 0.217921 0.990504 0.750449 6.02544e+07 0.00440414 1.32535e+07 5.35149e+06 1.32844e+07 138 1.32913e+07 8.71568e+06 0.00377211 1.32146e+07 49.8553 0.0136011 0.98991 0 50.0583 GTEX-1C6VQ-2126-SM-7IGNL 2 C1 2 pieces; congested 6.1 Spleen Spleen 0002106 957 733 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992688 582840 0.959808 0.993428 0.707973 26787 1 76 0.00244681 380 0 1.65292e+08 0.0397797 591534 1.66386e+08 1.12951e+07 26867 8.23111e+07 0 0.251835 0.993428 0.70332 1.65292e+08 0.00312037 3.59618e+07 2.49733e+07 3.62404e+07 359 3.62347e+07 2.42787e+07 0.00278334 3.60986e+07 49.9059 0.0035552 0.994168 0 50.1929 GTEX-1C6VQ-2326-SM-7IGN1 2 C1 6 pieces; glomeruli in all sections, few sclerotic, arterionephrosclerosis 6 Kidney Kidney - Cortex 0001225 960 731 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994089 232500 0.976209 0.994964 0.855905 23154 1 76 0.00181895 370 0 9.55263e+07 0.0236323 1.29251e+07 9.60098e+07 5.63468e+06 23175 4.76214e+07 0 0.120304 0.994964 0.851594 9.55263e+07 0.00249144 2.12246e+07 1.48196e+07 2.19127e+07 354 2.17998e+07 9.01202e+06 0.0021549 2.13997e+07 49.537 0.134623 0.995838 0 50.7975 GTEX-1C6VQ-2326-SM-DLL3O 2 C1 6 pieces; glomeruli in all sections, few sclerotic, arterionephrosclerosis Kidney Kidney - Cortex 0001225 960 731 BP-55970 DNA Extraction from Paxgene-derived Lysate Plate Based 08/15/2014 LCSET-10443 01/28/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1C6VQ-2426-SM-7EWEU 2 C1 2 pieces; fibromuscular stroma with glands with predominantly sloughed epithelium 6.3 Prostate Prostate 0002367 965 727 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989851 202852 0.963311 0.991965 0.744804 23372 1 76 0.00244761 120 0 5.5729e+07 0.0363842 1.21205e+06 5.61804e+07 5.00245e+06 23390 2.77065e+07 0 0.218507 0.991965 0.73882 5.5729e+07 0.00379888 1.22793e+07 8.54836e+06 1.2408e+07 139 1.24165e+07 6.72382e+06 0.0031218 1.23856e+07 49.9377 0.0215743 0.99408 0 50.2607 GTEX-1C6VQ-2626-SM-7IGMQ 1 C1 6 pieces; target muscularis with small attachment of fat on 3 pieces 6.1 Colon Colon - Sigmoid 0001159 969 724 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993407 192576 0.971063 0.99438 0.802544 22690 1 76 0.0019732 164 0 7.36588e+07 0.0287043 945986 7.40752e+07 4.41913e+06 22708 3.67078e+07 0 0.168519 0.99438 0.798033 7.36588e+07 0.00307147 1.5918e+07 7.05521e+06 1.61063e+07 187 1.60538e+07 1.14785e+07 0.0025218 1.60453e+07 49.9866 0.0127706 0.995353 0 50.294 GTEX-1C6VQ-2726-SM-73KUL 2 C1 6 pieces; autolyzed mucosa, muscularis is better preserved 6 Colon Colon - Transverse 0001157 970 723 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6197 12/20/2014 TruSeq.v1 RNASEQ 0.986148 330679 0.968477 0.987259 0.766756 25131 1 76 0.00470726 164 0 8.53322e+07 0.0292462 487914 8.64335e+07 4.28858e+06 25162 4.22897e+07 0 0.20172 0.987259 0.756987 8.53322e+07 0.00525371 1.88145e+07 1.12176e+07 1.88701e+07 177 1.89587e+07 1.32903e+07 0.00498018 1.88231e+07 49.8206 0.00564496 0.98837 0 50.0739 GTEX-1C6VQ-3026-SM-7IGPU 1 C1 4 pieces 6 Brain Brain - Cortex 0001870 976 719 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995131 892978 0.940279 0.995692 0.814247 22150 1 76 0.0016569 265 0 7.83259e+07 0.0594142 5.82686e+06 7.86647e+07 2.48279e+06 22163 3.90593e+07 0 0.126033 0.995692 0.810739 7.83259e+07 0.00202095 1.64502e+07 4.27969e+07 1.72097e+07 304 1.703e+07 7.84723e+06 0.00183882 1.6681e+07 49.4824 0.074072 0.996254 0 51.1283 GTEX-1C6VQ-3126-SM-7MKGH 2 C1 1 piece; adenohypophysis and neurohypophysis (marked) 6.9 Pituitary Pituitary 0000007 976 719 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985282 408324 0.959316 0.989907 0.788814 25702 1 76 0.00382244 165 0 8.33821e+07 0.0403779 500826 8.42322e+07 1.17836e+07 25735 4.13634e+07 0 0.170502 0.989907 0.780853 8.33821e+07 0.00499509 1.77096e+07 1.78022e+07 1.80188e+07 201 1.81828e+07 1.34018e+07 0.00440602 1.79096e+07 49.6215 0.00594578 0.994532 0 50.4328 GTEX-1C6VR-0003-SM-7J39D B1 Blood Whole Blood 0013756 919 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C6VR-0003-SM-7MA6D B1 Blood Whole Blood 0013756 919 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C6VR-0005-SM-7MKF7 B1 8.5 Blood Whole Blood 0013756 919 BP-54484 RNA isolation_PAXgene Blood RNA (Manual) 06/30/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.956041 307508 0.985781 0.961531 0.802728 18455 1 76 0.00344222 98 0 9.00521e+07 0.0128318 193749 9.3655e+07 1.13845e+07 18460 4.46062e+07 0 0.183053 0.961531 0.771847 9.00521e+07 0.00561665 2.14991e+07 1.50715e+08 2.1211e+07 137 2.1434e+07 2.42808e+07 0.00452323 2.1817e+07 50.4428 0.00206875 0.96702 0 49.6628 GTEX-1C6VR-0011-R10b-SM-7P8QA B1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 916 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.986241 379138 0.965236 0.98866 0.842101 23938 1 76 0.00332304 271 0 9.72316e+07 0.034477 6.30856e+06 9.83469e+07 1.42824e+07 23955 4.83856e+07 0 0.123134 0.98866 0.832552 9.72316e+07 0.00390078 2.09024e+07 2.01091e+07 2.17922e+07 291 2.17068e+07 9.48133e+06 0.0036112 2.11787e+07 49.3843 0.064146 0.991078 0 51.0421 GTEX-1C6VR-0011-R1a-SM-7MXUE B1, A1 5.8 Brain Brain - Hippocampus 0001954 916 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.974278 208826 0.967809 0.984727 0.828836 22321 1 76 0.00320975 201 0 7.77424e+07 0.0320112 6.98617e+06 7.89482e+07 1.22765e+07 22333 3.84016e+07 0 0.138972 0.984727 0.816178 7.77424e+07 0.00434465 1.67017e+07 2.90791e+07 1.692e+07 255 1.71202e+07 6.05596e+06 0.00377118 1.71926e+07 50.1055 0.0884905 0.995177 0 50.3247 GTEX-1C6VR-0011-R2a-SM-7RHGZ B1, A1 5.6 Brain Brain - Substantia nigra 0002038 916 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991665 145718 0.976989 0.994079 0.862555 21669 1 76 0.00275283 372 0 8.83089e+07 0.0228675 1.23431e+07 8.88349e+07 8.18887e+06 21679 4.39708e+07 0 0.114434 0.994079 0.857448 8.83089e+07 0.00434154 1.9346e+07 1.97143e+07 2.00041e+07 338 1.96102e+07 6.50429e+06 0.00354525 1.98783e+07 50.3394 0.138944 0.996493 0 50.8362 GTEX-1C6VR-0011-R4b-SM-9QEGZ B1, A1 5.7 Brain Brain - Amygdala 0001876 916 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.98966 255582 0.964222 0.99295 0.857192 21832 1 76 0.00211452 272 0 7.09676e+07 0.03553 7.81906e+06 7.14714e+07 3.51022e+06 21847 3.53017e+07 0 0.107029 0.99295 0.851149 7.09676e+07 0.00421386 1.55951e+07 1.29195e+07 1.59612e+07 260 1.58281e+07 6.38721e+06 0.00316071 1.5915e+07 50.137 0.109401 0.996241 0 50.58 GTEX-1C6VR-0011-R5a-SM-9QEH1 B1, A1 6.1 Brain Brain - Caudate (basal ganglia) 0001873 916 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989719 359582 0.972006 0.993268 0.847886 21163 1 76 0.00216988 368 0 9.40194e+07 0.0278804 1.10594e+07 9.46567e+07 4.59423e+06 21177 4.67607e+07 0 0.12412 0.993268 0.842178 9.40194e+07 0.00437064 2.04031e+07 3.15281e+07 2.09815e+07 337 2.07498e+07 5.36461e+06 0.00326633 2.08796e+07 50.156 0.116837 0.996817 0 50.6988 GTEX-1C6VR-0011-R6a-SM-7MXU8 B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 916 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975866 250424 0.961284 0.986063 0.828206 23607 1 76 0.0032296 198 0 7.83599e+07 0.0384869 4.6138e+06 7.94675e+07 1.32203e+07 23622 3.87103e+07 0 0.133077 0.986063 0.816664 7.83599e+07 0.00435754 1.68537e+07 1.99795e+07 1.68956e+07 247 1.71671e+07 7.72394e+06 0.00378773 1.72905e+07 50.179 0.058059 0.99626 0 50.062 GTEX-1C6VR-0011-R8b-SM-7MXUF B1, A1 7.5 Brain Brain - Hypothalamus 0001898 916 BP-57558 RNA isolation_PAXgene Tissue miRNA 10/27/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976582 200760 0.959747 0.986536 0.816925 24838 1 76 0.00304177 200 0 7.16915e+07 0.0398974 1.93037e+06 7.26699e+07 1.16826e+07 24865 3.54198e+07 0 0.142821 0.986536 0.805926 7.16915e+07 0.00404025 1.55702e+07 1.18851e+07 1.5594e+07 215 1.58793e+07 9.10159e+06 0.00353597 1.59392e+07 50.0941 0.0265635 0.996491 0 50.0381 GTEX-1C6VR-0126-SM-7RHGB 0 B1 6 pieces, no significant dermal fat, squamous epithelium is ~50 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 961 1339 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990123 142689 0.970584 0.992907 0.752152 23465 1 76 0.0025698 182 0 7.98156e+07 0.029202 429825 8.03857e+07 7.75732e+06 23499 3.97147e+07 0 0.218432 0.992907 0.746818 7.98156e+07 0.00399045 1.74178e+07 8.5835e+06 1.75385e+07 178 1.75991e+07 1.25611e+07 0.00327813 1.75677e+07 49.9553 0.00534703 0.995692 0 50.1727 GTEX-1C6VR-0426-SM-7IGN6 1 B1 2 pieces, no abnormalities, adherent nubbin of fat/fibrous tissue up to ~2mm 6.1 Thyroid Thyroid 0002046 982 1318 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993261 272096 0.968414 0.994156 0.69569 23883 1 76 0.00226673 117 0 6.16453e+07 0.0312831 247503 6.20077e+07 4.02093e+06 23925 3.07074e+07 0 0.272724 0.994156 0.691624 6.16453e+07 0.00290018 1.35401e+07 5.67122e+06 1.36208e+07 130 1.36301e+07 8.48725e+06 0.00258317 1.3584e+07 49.9153 0.00399149 0.99505 0 50.1486 GTEX-1C6VR-0626-SM-79OOY 1 B1 2 pieces, moderate congestion 6.5 Lung Lung 0008952 985 1315 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.988103 80563 0.974388 0.987213 0.730378 21930 1 76 0.00352317 109 0 5.43444e+07 0.0249347 209605 5.50483e+07 3.70029e+06 21963 2.70005e+07 0 0.24401 0.987213 0.721038 5.43444e+07 0.00465938 1.21059e+07 4.8106e+06 1.20921e+07 114 1.21083e+07 8.31178e+06 0.00409179 1.20441e+07 49.8671 0.00380765 0.986322 0 49.9715 GTEX-1C6VR-0726-SM-7P8OV 1 B1 2 pieces, ~60% glandular elements (delineated); rest is muscle/fibrous tissue 7.1 Salivary Gland Minor Salivary Gland 0006330 989 1311 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990897 168794 0.974786 0.992567 0.790338 23955 1 76 0.00327234 169 0 7.79987e+07 0.0240974 344044 7.85828e+07 1.0486e+07 23982 3.88211e+07 0 0.184448 0.992567 0.784463 7.79987e+07 0.00410538 1.75963e+07 1.25788e+07 1.78535e+07 197 1.79094e+07 1.38393e+07 0.00368816 1.76628e+07 49.6534 0.00437811 0.994237 0 50.3627 GTEX-1C6VR-1126-SM-7EPHD 1 B1 2 pieces, trace fascia/vascular elements 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 999 1301 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.988844 355226 0.973709 0.991149 0.803124 24098 1 76 0.00322342 124 0 7.73101e+07 0.0259885 597109 7.80005e+07 1.10266e+07 24123 3.84453e+07 0 0.170585 0.991149 0.796016 7.73101e+07 0.0118797 1.69762e+07 8.58252e+06 1.71294e+07 143 1.71957e+07 1.26528e+07 0.00754149 1.70786e+07 49.8291 0.0076552 0.993454 0 50.2246 GTEX-1C6VR-1526-SM-7MKG9 2 B1 2 pieces, spermatogenesis present 6.1 Testis Testis 0000473 1013 1287 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981554 534113 0.917833 0.987338 0.711417 34043 1 76 0.0040999 177 0 8.8706e+07 0.0818119 811706 8.98436e+07 1.38085e+07 34115 4.39366e+07 0 0.206416 0.987338 0.702409 8.8706e+07 0.00504588 1.77718e+07 1.48109e+07 1.79883e+07 166 1.82661e+07 1.39669e+07 0.00457012 1.79442e+07 49.5555 0.00903466 0.993122 0 50.3028 GTEX-1C6VR-2426-SM-79OLD 0 B1 6 pieces, minimal dermal fat, squamous epithelium is ~40-50 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 1093 1207 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973448 220636 0.969354 0.977655 0.750904 23309 1 76 0.00543863 142 0 5.77247e+07 0.0304211 266588 5.9044e+07 1.45446e+07 23331 2.86995e+07 0 0.21845 0.977655 0.734125 5.77247e+07 0.00678214 1.25138e+07 6.90496e+06 1.25419e+07 116 1.26422e+07 9.31364e+06 0.00610749 1.26411e+07 49.9977 0.00451508 0.981863 0 50.056 GTEX-1C6VR-2526-SM-7DHMT 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 1098 1202 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991935 178285 0.98339 0.993246 0.876597 20264 1 76 0.00341506 157 0 7.87625e+07 0.0163792 842841 7.9298e+07 5.99952e+06 20272 3.92317e+07 0 0.106794 0.993246 0.870676 7.87625e+07 0.00509188 1.70841e+07 7.77079e+06 1.73943e+07 179 1.74015e+07 1.64032e+07 0.00425236 1.7164e+07 49.6564 0.0106288 0.994557 0 50.4499 GTEX-1C6VR-2626-SM-7MGX2 1 B1 2 pieces, ~10% fascia/tendon, rep delineated 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 1102 1198 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989336 101160 0.973817 0.99147 0.796493 22212 1 76 0.00279904 125 0 5.8853e+07 0.0258961 633807 5.93593e+07 4.75044e+06 22235 2.93039e+07 0 0.177325 0.99147 0.789698 5.8853e+07 0.00355624 1.29272e+07 6.16151e+06 1.30315e+07 140 1.3043e+07 8.90535e+06 0.00317683 1.30314e+07 49.9778 0.0106775 0.993603 0 50.2008 GTEX-1C6VR-2726-SM-79OM7 0 B1 2 pieces, few nubbins of adherent fat up to ~0.5mm 7 Nerve Nerve - Tibial 0001323 1104 1196 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.974053 165757 0.967989 0.97813 0.738843 23443 1 76 0.00521752 127 0 5.86437e+07 0.031724 250317 5.99549e+07 1.39666e+07 23480 2.91595e+07 0 0.229146 0.97813 0.722684 5.86437e+07 0.006478 1.28717e+07 5.32955e+06 1.29132e+07 121 1.29889e+07 8.64325e+06 0.00584513 1.30212e+07 50.0622 0.00417509 0.982207 0 50.0805 GTEX-1C6VR-2826-SM-7EWEE 0 B1 2 pieces, no adherent fat/atherosis 6.3 Blood Vessel Artery - Tibial 0007610 1110 1190 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99071 106869 0.968311 0.992256 0.782656 21054 1 76 0.00242179 123 0 5.86402e+07 0.0313785 431464 5.90979e+07 5.41744e+06 21076 2.9158e+07 0 0.185656 0.992256 0.776594 5.86402e+07 0.00353317 1.25082e+07 4.59435e+06 1.25555e+07 136 1.2547e+07 9.54873e+06 0.00297662 1.25982e+07 50.1016 0.00730083 0.993801 0 50.0944 GTEX-1C6VR-3026-SM-7IGLW 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cerebellum 0002037 1158 1142 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993356 1.07454e+06 0.925993 0.994199 0.7084 25191 1 76 0.00238458 272 0 1.2296e+08 0.0736605 2.70651e+06 1.23678e+08 7.56911e+06 25230 6.12913e+07 0 0.217593 0.994199 0.704291 1.2296e+08 0.00288579 2.57116e+07 5.47907e+07 2.6488e+07 320 2.64068e+07 1.18517e+07 0.00263498 2.58934e+07 49.5092 0.0218835 0.995042 0 50.7436 GTEX-1C6VR-3126-SM-7MXTT 1 B1 2 pieces, mainly adenohypophysis; 2mm nubbin of neurohypophysis, delineated 6.7 Pituitary Pituitary 0000007 1159 1141 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.98211 163990 0.963177 0.988935 0.737274 25603 1 76 0.00293598 129 0 7.10171e+07 0.0365971 437155 7.18117e+07 9.48068e+06 25646 3.5191e+07 0 0.225903 0.988935 0.729116 7.10171e+07 0.00401959 1.40983e+07 8.15548e+06 1.41629e+07 151 1.43343e+07 1.03764e+07 0.00347405 1.4338e+07 50.0063 0.00608752 0.995759 0 50.1143 GTEX-1C6VS-0003-SM-7MA5Y B1 Blood Whole Blood 0013756 596 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C6VS-0003-SM-DJWWB B1 Blood Whole Blood 0013756 596 BP-54491 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/30/2014 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1C6VS-0005-SM-7MGWG B1 7.3 Blood Whole Blood 0013756 596 BP-54484 RNA isolation_PAXgene Blood RNA (Manual) 06/30/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.974216 199484 0.986403 0.975988 0.812806 16889 1 76 0.00280729 91 0 7.32916e+07 0.0128632 301873 7.50948e+07 6.09847e+06 16892 3.64946e+07 0 0.173598 0.975988 0.793288 7.32916e+07 0.00368175 1.75278e+07 1.10664e+08 1.74947e+07 120 1.75458e+07 1.97762e+07 0.00324373 1.76158e+07 50.0995 0.00401989 0.977759 0 49.9528 GTEX-1C6VS-0008-SM-EXOI4 B1 7.5 Skin Cells - Cultured fibroblasts EFO_0002009 745 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991858 376197 0.983044 0.993747 0.862367 19941 1 76 0.00170651 182 0 7.9569e+07 0.0166495 131734 8.00697e+07 4.51487e+06 19953 3.96222e+07 0 0.120677 0.993747 0.856975 7.9569e+07 0.0027348 1.79441e+07 7.04418e+06 1.80473e+07 176 1.81154e+07 2.10849e+07 0.00221968 1.80174e+07 49.8643 0.00164524 0.995636 0 50.1434 GTEX-1C6VS-0011-R5a-SM-7MXU9 B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 599 BP-57320 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.968636 1.52093e+06 0.954753 0.978922 0.785129 24462 1 76 0.00308461 374 0 1.68461e+08 0.0450896 1.48937e+07 1.72088e+08 2.77889e+07 24486 8.32168e+07 0 0.169624 0.978922 0.76858 1.68461e+08 0.00442525 3.44992e+07 1.54321e+08 3.56236e+07 389 3.54943e+07 1.03775e+07 0.00374789 3.59809e+07 50.3404 0.0865466 0.989208 0 50.8018 GTEX-1C6VS-0011-R9b-SM-9WG5W B1, A1 6.2 Brain Brain - Spinal cord (cervical c-1) 0006469 599 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990238 276349 0.965729 0.993411 0.847219 21843 1 76 0.00251587 382 0 9.06723e+07 0.0340782 6.29474e+06 9.12737e+07 6.8646e+06 21858 4.51052e+07 0 0.11851 0.993411 0.841637 9.06723e+07 0.00359466 1.99055e+07 1.42753e+07 2.05723e+07 359 2.02876e+07 8.35661e+06 0.00305354 2.04419e+07 50.1894 0.0689655 0.996584 0 50.8237 GTEX-1C6VS-0126-SM-7PC2H 1 B1 2 fragmented pieces; 10% internal fat 7.5 Muscle Muscle - Skeletal 0011907 737 997 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989059 497016 0.983077 0.992212 0.851875 20806 1 76 0.00324382 272 0 1.01836e+08 0.0166875 942705 1.02635e+08 1.7276e+07 20819 5.06092e+07 0 0.131202 0.992212 0.845241 1.01836e+08 0.00433632 2.22653e+07 1.06623e+07 2.23993e+07 266 2.26304e+07 2.153e+07 0.00378834 2.23362e+07 49.6729 0.00918503 0.995364 0 50.15 GTEX-1C6VS-0226-SM-7SB7B 1 B1 2 pieces; up to 0.8mm (25%) and 0.4mm external fat 6.3 Nerve Nerve - Tibial 0001323 739 995 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989153 138940 0.955482 0.991683 0.61661 24014 1 76 0.00304833 114 0 5.85606e+07 0.0442951 77905 5.90518e+07 6.57658e+06 24063 2.9107e+07 0 0.338872 0.991683 0.611482 5.85606e+07 0.00445841 1.27021e+07 6.03926e+06 1.28122e+07 115 1.28475e+07 6.82068e+06 0.00375157 1.28108e+07 49.9285 0.00131927 0.994212 0 50.2157 GTEX-1C6VS-0326-SM-7MGX5 1 B1 2 pieces; uneven plane of sections; medial calcifications (outlined); fibrosclerotic plaque with luminal compromise 5.7 Blood Vessel Artery - Tibial 0007610 742 992 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989456 151594 0.970877 0.991399 0.774515 21589 1 76 0.00291028 118 0 5.43752e+07 0.0288241 235462 5.48469e+07 4.30491e+06 21605 2.70645e+07 0 0.196361 0.991399 0.767854 5.43752e+07 0.0037099 1.17441e+07 6.85782e+06 1.18227e+07 124 1.18335e+07 8.59454e+06 0.00330931 1.18368e+07 50.007 0.00429307 0.993343 0 50.1668 GTEX-1C6VS-0426-SM-79OJV 1 B1 2 pieces; 5% and 10% fibrovascular component and nerves (arrows) 7 Adipose Tissue Adipose - Subcutaneous 0002190 743 991 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.978074 182378 0.977835 0.981899 0.799201 22162 1 76 0.00486968 136 0 6.58179e+07 0.0218339 209162 6.70313e+07 1.49781e+07 22187 3.27287e+07 0 0.178634 0.981899 0.784735 6.58179e+07 0.00603432 1.44344e+07 7.44795e+06 1.45005e+07 146 1.45879e+07 1.10397e+07 0.00544973 1.45859e+07 49.9965 0.00312037 0.985724 0 50.1142 GTEX-1C6VS-0526-SM-7DUEN 1 B1 6 pieces; ~20% to 30% internal fat; ~30 microns epidermis 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 746 988 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992603 311200 0.973273 0.9933 0.767107 27191 1 76 0.00287313 225 0 8.86082e+07 0.0264619 431021 8.92058e+07 8.01012e+06 27228 4.41243e+07 0 0.206166 0.9933 0.761968 8.86082e+07 0.00415912 1.95286e+07 9.74393e+06 1.96311e+07 210 1.97029e+07 1.45956e+07 0.00351567 1.95168e+07 49.7627 0.00483176 0.993998 0 50.1309 GTEX-1C6VS-0726-SM-7EPHF 1 B1 2 pieces; dense fibrous stroma with ductal structures suggestive of gynecomastoid stromal and ductal hyperplasia and adipose tissue 6.9 Breast Breast - Mammary Tissue 0008367 874 860 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6443,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.990357 217608 0.976874 0.992316 0.781113 24960 1 76 0.00281929 280 0 1.08954e+08 0.0226702 419567 1.09798e+08 1.3572e+07 25000 5.42427e+07 0 0.195761 0.992316 0.775111 1.08954e+08 0.00646743 2.40092e+07 1.28724e+07 2.4251e+07 270 2.42918e+07 1.80319e+07 0.00463976 2.41763e+07 49.8808 0.00382126 0.994275 0 50.2506 GTEX-1C6VS-0826-SM-7EWEI 1 B1 2 pieces; variation in size of thyroid follicles; one 1.27mm in diameter nodule (outlined) 6.3 Thyroid Thyroid 0002046 821 913 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.990746 137173 0.966621 0.992663 0.775548 23162 1 76 0.00246789 127 0 5.93523e+07 0.0330676 166139 5.9791e+07 5.2442e+06 23192 2.95366e+07 0 0.191073 0.992663 0.769858 5.93523e+07 0.00367151 1.29759e+07 6.08624e+06 1.29964e+07 134 1.30257e+07 9.89548e+06 0.00306854 1.3054e+07 50.0543 0.00277866 0.99458 0 50.0396 GTEX-1C6VS-1126-SM-7EWEW 2 B1 2 pieces; diffuse marked thickening of tubular basement membrane and lack of mature spermatogenesis 6.4 Testis Testis 0000473 879 855 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99036 197738 0.955573 0.992404 0.726644 27080 1 76 0.00253605 116 0 5.62728e+07 0.0442416 850240 5.67035e+07 4.95844e+06 27116 2.79914e+07 0 0.228929 0.992404 0.721125 5.62728e+07 0.0037173 1.22515e+07 6.04032e+06 1.23192e+07 131 1.23377e+07 6.97511e+06 0.00312546 1.23388e+07 50.0024 0.0149945 0.994449 0 50.1378 GTEX-1C6VS-1226-SM-79OO2 2 B1 2 pieces; marked congestion, hemosiderinophages, edema and anthracosis 6.7 Lung Lung 0008952 880 854 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.987581 137556 0.97043 0.986801 0.712175 23115 1 76 0.00347172 112 0 5.80847e+07 0.0292344 459335 5.88616e+07 4.06033e+06 23152 2.88616e+07 0 0.258255 0.986801 0.702776 5.80847e+07 0.00472624 1.28822e+07 6.2179e+06 1.28762e+07 124 1.2891e+07 7.89509e+06 0.00409948 1.28266e+07 49.8749 0.00780365 0.986022 0 49.9882 GTEX-1C6VS-1826-SM-73KXN 0 B1 2 pieces; lobulated mature adipose tissue 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 893 841 BP-55773 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2014 LCSET-6198 01/14/2015 TruSeq.v1 RNASEQ 0.989942 391976 0.97072 0.991293 0.747619 23565 1 76 0.00289841 208 0 9.71164e+07 0.0289565 628602 9.79694e+07 1.01841e+07 23622 4.83241e+07 0 0.223101 0.991293 0.741109 9.71164e+07 0.0034517 2.13136e+07 1.29041e+07 2.13548e+07 228 2.14544e+07 1.48157e+07 0.00317468 2.1345e+07 49.8722 0.00641631 0.992644 0 50.0483 GTEX-1C6VS-2926-SM-7EWEV 2 B1 1 piece; moderately autolyzed adenohypophysis and mildly autolyzed neurohypophysis [labeled] 6.3 Pituitary Pituitary 0000007 949 785 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991673 212218 0.963601 0.993695 0.802141 23058 1 76 0.00242733 155 0 6.98871e+07 0.03624 914187 7.03305e+07 6.09131e+06 23088 3.47963e+07 0 0.16146 0.993695 0.797084 6.98871e+07 0.00376364 1.52446e+07 9.40771e+06 1.54104e+07 188 1.54237e+07 8.44326e+06 0.00309413 1.53648e+07 49.9044 0.0129984 0.995718 0 50.2705 GTEX-1C6VS-3026-SM-79OLA 1 B1 2 pieces; meninges attached (arrows) 7 Brain Brain - Cortex 0001870 953 781 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980479 252585 0.965456 0.984105 0.82882 23454 1 76 0.00482626 128 0 6.28407e+07 0.0342945 3.15295e+06 6.38556e+07 1.38577e+07 23467 3.12624e+07 0 0.136636 0.984105 0.815646 6.28407e+07 0.00609554 1.36859e+07 1.16036e+07 1.39253e+07 163 1.39457e+07 6.77723e+06 0.00545856 1.38684e+07 49.8612 0.0493763 0.987731 0 50.4335 GTEX-1C6WA-0003-SM-7J39H B1 Blood Whole Blood 0013756 1004 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1C6WA-0003-SM-7MA6H B1 Blood Whole Blood 0013756 1004 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1C6WA-0008-SM-EXUR7 B1 8.7 Skin Cells - Cultured fibroblasts EFO_0002009 1135 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.993881 686194 0.983653 0.994508 0.866573 19099 1 76 0.00143982 155 0 7.6144e+07 0.0160388 153930 7.65644e+07 1.76412e+06 19112 3.79396e+07 0 0.11708 0.994508 0.861814 7.6144e+07 0.00188782 1.7278e+07 6.43032e+06 1.73002e+07 163 1.74102e+07 2.01339e+07 0.00166368 1.72158e+07 49.7192 0.00201046 0.995136 0 50.0321 GTEX-1C6WA-0011-R3a-SM-9OSVP B1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1092 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99144 433889 0.965394 0.994083 0.862366 23763 1 76 0.00265725 271 0 9.76342e+07 0.0343199 5.71839e+06 9.82153e+07 9.81726e+06 23777 4.85829e+07 0 0.103028 0.994083 0.857264 9.76342e+07 0.00375343 2.13164e+07 1.9157e+07 2.17533e+07 324 2.17419e+07 1.09982e+07 0.00320388 2.15393e+07 49.7659 0.058223 0.996727 0 50.5072 GTEX-1C6WA-0011-R4a-SM-9QEH2 B1, A1 5.9 Brain Brain - Amygdala 0001876 1092 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990907 655268 0.954875 0.99389 0.848496 22845 1 76 0.00199641 373 0 8.73589e+07 0.0448861 7.92823e+06 8.7896e+07 4.20428e+06 22860 4.34627e+07 0 0.106379 0.99389 0.843311 8.73589e+07 0.00406951 1.89479e+07 2.7867e+07 1.93514e+07 336 1.93159e+07 8.74788e+06 0.00302985 1.92053e+07 49.8564 0.0902001 0.996872 0 50.5268 GTEX-1C6WA-0011-R5a-SM-9WG5X B1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 1092 BP-59486 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992055 601260 0.960816 0.994506 0.84541 24729 1 76 0.00261127 375 0 1.37497e+08 0.0389487 9.53578e+06 1.38256e+08 9.22847e+06 24751 6.8453e+07 0 0.115406 0.994506 0.840766 1.37497e+08 0.00340201 2.98158e+07 3.66901e+07 3.04577e+07 357 3.03133e+07 1.33182e+07 0.00300567 3.02456e+07 49.9441 0.0689718 0.996958 0 50.5325 GTEX-1C6WA-0011-R6a-SM-7PBYP B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1092 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988691 324623 0.968791 0.992528 0.8592 24607 1 76 0.00300951 375 0 1.16435e+08 0.030861 7.51428e+06 1.17312e+08 1.52349e+07 24631 5.78666e+07 0 0.109591 0.992528 0.85278 1.16435e+08 0.00500863 2.56109e+07 1.76237e+07 2.5994e+07 347 2.59801e+07 1.44168e+07 0.0040052 2.60259e+07 50.0441 0.064054 0.996365 0 50.3712 GTEX-1C6WA-0011-R7b-SM-7P8S8 B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 1092 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.940802 439336 0.963682 0.968095 0.849899 23067 1 76 0.0047279 197 0 8.01562e+07 0.0361049 5.21231e+06 8.27979e+07 1.31933e+07 23078 3.88324e+07 0 0.113783 0.968095 0.822782 8.01562e+07 0.00838251 1.7262e+07 2.43284e+07 1.68629e+07 255 1.79427e+07 7.07716e+06 0.00650369 1.81146e+07 50.2385 0.0629522 0.995388 0 49.4152 GTEX-1C6WA-0011-R8b-SM-7P8S7 B1, A1 6.7 Brain Brain - Hypothalamus 0001898 1092 BP-57332 RNA isolation_PAXgene Tissue miRNA 10/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.936224 370642 0.967983 0.965833 0.863841 23266 1 76 0.00464884 196 0 7.53258e+07 0.0316871 4.83558e+06 7.79905e+07 1.27673e+07 23280 3.63977e+07 0 0.104142 0.965833 0.834326 7.53258e+07 0.00899625 1.62811e+07 1.79656e+07 1.59454e+07 215 1.70324e+07 8.11338e+06 0.00675591 1.72216e+07 50.2761 0.0620021 0.995442 0 49.4792 GTEX-1C6WA-0126-SM-7PC2B 2 B1 6 pieces; up to 4 hair follicles per piece; 10 to 40% dermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1138 1086 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988166 346087 0.975392 0.991429 0.796316 24855 1 76 0.00355033 223 0 9.00012e+07 0.0243228 590681 9.07793e+07 1.53264e+07 24890 4.47104e+07 0 0.179076 0.991429 0.789491 9.00012e+07 0.00463872 1.97425e+07 1.04297e+07 1.99345e+07 233 2.00759e+07 1.5494e+07 0.00409273 1.98815e+07 49.7568 0.00650678 0.994691 0 50.242 GTEX-1C6WA-0226-SM-7IGPO 1 B1 2 pieces; 10 & 40% fibrous content 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1142 1082 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994951 198288 0.974622 0.995166 0.782661 22140 1 76 0.00203309 131 0 5.85199e+07 0.025051 252559 5.88042e+07 2.3093e+06 22162 2.91596e+07 0 0.191962 0.995166 0.778877 5.85199e+07 0.00235254 1.28537e+07 5.19748e+06 1.29893e+07 139 1.29814e+07 9.85379e+06 0.00219278 1.28777e+07 49.7996 0.00429491 0.995381 0 50.2623 GTEX-1C6WA-0326-SM-7DUGE 1 B1 2 pieces; 10 & 20% internal fat 7.3 Muscle Muscle - Skeletal 0011907 1147 1077 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6442,LCSET-6866 02/22/2015 TruSeq.v1 RNASEQ 0.992459 569407 0.983625 0.994227 0.867133 21562 1 76 0.0024237 269 0 1.16638e+08 0.0160794 2.23221e+06 1.17315e+08 1.26242e+07 21582 5.8082e+07 0 0.116491 0.994227 0.862127 1.16638e+08 0.00402526 2.53823e+07 1.28894e+07 2.58106e+07 329 2.5986e+07 2.29288e+07 0.00322305 2.53908e+07 49.4208 0.0190274 0.995995 0 50.4184 GTEX-1C6WA-0426-SM-7PC2C 1 B1 1 piece; artery NOT nerve; no plaque; well trimmed 7.5 Blood Vessel Artery - Tibial 0007610 1150 1074 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987961 370508 0.975174 0.991141 0.80853 22445 1 76 0.00341562 208 0 9.04428e+07 0.0244418 587484 9.12512e+07 1.45496e+07 22477 4.49208e+07 0 0.166644 0.991141 0.801368 9.04428e+07 0.00474022 1.9482e+07 8.88374e+06 1.96867e+07 240 1.98219e+07 1.59048e+07 0.00407579 1.96121e+07 49.734 0.0064381 0.994321 0 50.2614 GTEX-1C6WA-0526-SM-7IGNZ 1 B1 1 piece; nerve NOT artery 5.9 Nerve Nerve - Tibial 0001323 1152 1072 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993162 223966 0.967211 0.993183 0.732837 23671 1 76 0.00207813 146 0 6.88699e+07 0.0324767 298496 6.93426e+07 2.88546e+06 23706 3.43083e+07 0 0.234374 0.993183 0.727841 6.88699e+07 0.00245382 1.5159e+07 5.67968e+06 1.52826e+07 153 1.52677e+07 1.04345e+07 0.00226597 1.51793e+07 49.8548 0.00430465 0.993204 0 50.2032 GTEX-1C6WA-0726-SM-7IGQ5 2 B1 2 pieces; patchy emphysema and fibrosis; pulmonary edema & congestion 5.9 Lung Lung 0008952 1202 1022 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.992774 177833 0.972034 0.992952 0.756477 23453 1 76 0.00234651 149 0 7.34001e+07 0.0274412 905222 7.39211e+07 2.86717e+06 23480 3.65628e+07 0 0.215557 0.992952 0.751146 7.34001e+07 0.00271381 1.60989e+07 8.31991e+06 1.63169e+07 171 1.62772e+07 1.05504e+07 0.00253013 1.61571e+07 49.8148 0.0122458 0.993131 0 50.3363 GTEX-1C6WA-0826-SM-7PBXS 1 B1 2 pieces; high interstitial fibrous content, 40% 6.1 Heart Heart - Atrial Appendage 0006631 1209 1015 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987388 166975 0.977436 0.991366 0.821411 23999 1 76 0.00298554 374 0 1.08117e+08 0.0222892 5.91063e+06 1.09058e+08 1.48905e+07 24029 5.36979e+07 0 0.156024 0.991366 0.814319 1.08117e+08 0.00527936 2.38401e+07 1.13631e+07 2.40582e+07 353 2.41589e+07 1.63111e+07 0.00412785 2.41496e+07 49.9903 0.0541969 0.995343 0 50.2277 GTEX-1C6WA-1126-SM-7IGP6 1 B1 2 pieces; large calcific deposit in 1 piece; excessive perivascular extraneous fat over 60% 5.8 Blood Vessel Artery - Coronary 0001621 1224 1000 BP-55901 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994042 171365 0.97674 0.994195 0.832372 22159 1 76 0.00199625 154 0 6.85496e+07 0.023001 2.28580e+06 6.89499e+07 2.87969e+06 22173 3.41708e+07 0 0.144367 0.994195 0.82754 6.85496e+07 0.00232256 1.50858e+07 7.56684e+06 1.54183e+07 180 1.53944e+07 1.09531e+07 0.00215938 1.51215e+07 49.5529 0.0331517 0.994348 0 50.545 GTEX-1C6WA-2126-SM-7P8RR 1 B1 6 pieces; well dissected muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 1277 947 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.928867 255982 0.969625 0.96137 0.806487 23802 1 76 0.00438285 160 0 7.87307e+07 0.0301642 2.12761e+06 8.18942e+07 1.18691e+07 23827 3.79046e+07 0 0.163139 0.96137 0.775332 7.87307e+07 0.00921588 1.65515e+07 9.28577e+06 1.64008e+07 181 1.76921e+07 9.64559e+06 0.00671766 1.76881e+07 49.9944 0.02598 0.993873 0 49.7713 GTEX-1C6WA-2326-SM-7P8OW 2 B1 2 pieces; nodular glandular hyperplasia; glands have moderate to severe autolysis 6 Prostate Prostate 0002367 1291 933 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990384 178274 0.965112 0.992331 0.799506 24623 1 76 0.00306892 271 0 8.92068e+07 0.0345728 2.58218e+06 8.98962e+07 1.18379e+07 24654 4.44021e+07 0 0.165606 0.992331 0.793375 8.92068e+07 0.00435412 1.92018e+07 9.30727e+06 1.95108e+07 268 1.95225e+07 1.18685e+07 0.00371026 1.93531e+07 49.782 0.028724 0.994278 0 50.3991 GTEX-1C6WA-2426-SM-7SB86 1 B1 2 pieces; largely fat with 20% fibrous content in 1 piece with a few ducts 5.8 Breast Breast - Mammary Tissue 0008367 1290 934 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986334 351402 0.96564 0.989105 0.71747 24572 1 76 0.00293427 192 0 9.20832e+07 0.0341261 745016 9.30974e+07 1.05934e+07 24614 4.57584e+07 0 0.24817 0.989105 0.709653 9.20832e+07 0.00465018 2.00238e+07 1.49406e+07 2.03625e+07 215 2.03871e+07 1.13331e+07 0.00378982 2.02409e+07 49.8201 0.00800254 0.991876 0 50.4193 GTEX-1C6WA-2626-SM-7MKGM 2 B1 6 pieces; well-trimmed hair-bearing skin; 10% dermal fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1295 929 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981729 271116 0.974631 0.987969 0.78956 22700 1 76 0.0041968 140 0 6.62465e+07 0.0251675 389162 6.70532e+07 1.06025e+07 22723 3.27918e+07 0 0.185071 0.987969 0.780061 6.62465e+07 0.00522023 1.44995e+07 7.97893e+06 1.47898e+07 145 1.49533e+07 1.04311e+07 0.00470528 1.47345e+07 49.6315 0.00580378 0.994209 0 50.4956 GTEX-1C6WA-2926-SM-79OLF 2 B1 1 piece; no neural component 7.2 Pituitary Pituitary 0000007 1389 835 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977791 226399 0.964353 0.981641 0.77597 24355 1 76 0.00514185 112 0 5.90119e+07 0.0353803 214050 6.01156e+07 1.36929e+07 24377 2.93524e+07 0 0.188384 0.981641 0.761723 5.90119e+07 0.00649986 1.23747e+07 8.47946e+06 1.2448e+07 121 1.2532e+07 9.78799e+06 0.00581819 1.25007e+07 49.9375 0.00356064 0.98549 0 50.1476 GTEX-1C6WA-3026-SM-7P8RQ 1 B1 2 pieces; some admixture with white matter 6.1 Brain Brain - Cortex 0001870 1390 834 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.940064 277685 0.969836 0.967873 0.848667 23483 1 76 0.00450591 199 0 7.72003e+07 0.0298197 4.32748e+06 7.97629e+07 1.28725e+07 23494 3.73851e+07 0 0.12117 0.967873 0.821401 7.72003e+07 0.00866782 1.66819e+07 1.63907e+07 1.63941e+07 221 1.73886e+07 8.57065e+06 0.00652708 1.76509e+07 50.3743 0.0542543 0.995681 0 49.5651 GTEX-1C6WA-3326-SM-7MKGN 1 B1 2 pieces; some fragmentation 6.7 Brain Brain - Cerebellum 0002037 1387 837 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985104 438335 0.94488 0.989507 0.773953 22760 1 76 0.00444783 124 0 6.42958e+07 0.054636 1.03864e+06 6.49776e+07 1.04047e+07 22777 3.18748e+07 0 0.170927 0.989507 0.765832 6.42958e+07 0.00474006 1.36823e+07 2.1151e+07 1.40863e+07 139 1.42273e+07 8.79439e+06 0.0045933 1.38093e+07 49.2545 0.0159846 0.993909 0 50.7274 GTEX-1CAMQ-0003-SM-7J39C B1 Blood Whole Blood 0013756 494 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1CAMQ-0003-SM-7MA6C B1 Blood Whole Blood 0013756 494 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1CAMQ-0006-SM-A9SK3 B1 6.9 Blood Whole Blood 0013756 494 BP-54699 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7847 09/27/2015 TruSeq.v1 EXCLUDE 0.910354 374649 0.984188 0.911659 0.808835 15286 1 76 0.00620089 77 0 1.08336e+08 0.0125124 103060 1.18834e+08 2.00735e+07 15287 5.37428e+07 0 0.175352 0.911659 0.737382 1.08336e+08 0.00867005 2.61016e+07 2.794e+08 2.61944e+07 123 2.61869e+07 3.31402e+07 0.0074337 2.63374e+07 50.1432 0.00086726 0.912965 0 50.0887 GTEX-1CAMQ-0008-SM-EXOI5 B1 7.7 Skin Cells - Cultured fibroblasts EFO_0002009 588 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.991354 410122 0.979607 0.993432 0.858678 20001 1 76 0.0017308 159 0 7.49361e+07 0.0200822 130655 7.54316e+07 4.22499e+06 20011 3.7305e+07 0 0.120928 0.993432 0.853039 7.49361e+07 0.00283537 1.68375e+07 8.96432e+06 1.69309e+07 160 1.70028e+07 1.96552e+07 0.00228193 1.69107e+07 49.8641 0.0017321 0.995509 0 50.1384 GTEX-1CAMQ-0011-R8a-SM-ARU85 B1, A1 5.7 Brain Brain - Hypothalamus 0001898 498 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990282 506330 0.962034 0.991769 0.842293 19681 1 76 0.0026066 185 0 6.21323e+07 0.0378769 6.81449e+06 6.26479e+07 2.08051e+06 19690 3.096e+07 0 0.119741 0.991769 0.83536 6.21323e+07 0.00320105 1.32986e+07 2.58654e+07 1.39576e+07 203 1.37397e+07 2.77013e+06 0.00290338 1.35848e+07 49.7166 0.108774 0.993256 0 51.2089 GTEX-1CAMQ-0011-R9a-SM-9WG5Z B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 498 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991005 344138 0.966742 0.994006 0.853945 21825 1 76 0.00272634 279 0 8.60552e+07 0.0330021 5.7578e+06 8.65742e+07 6.44068e+06 21838 4.28166e+07 0 0.112798 0.994006 0.848826 8.60552e+07 0.00386877 1.90218e+07 1.48907e+07 1.95136e+07 321 1.92786e+07 9.09358e+06 0.00329583 1.94864e+07 50.2681 0.0665071 0.997007 0 50.638 GTEX-1CAMQ-0126-SM-7SB7S 1 B1 2 pieces; 10% and 25% fibrovascular component; one sample with numerous empty spaces (arrows) 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 586 837 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98875 375007 0.965967 0.991983 0.703855 24607 1 76 0.00271075 161 0 8.49144e+07 0.0337239 275995 8.56006e+07 9.82731e+06 24653 4.21979e+07 0 0.262112 0.991983 0.698212 8.49144e+07 0.00456205 1.85364e+07 1.09808e+07 1.87269e+07 167 1.88007e+07 1.34022e+07 0.00363338 1.87266e+07 49.9013 0.00322422 0.995216 0 50.2556 GTEX-1CAMQ-0226-SM-7IGPK 0 B1 6 pieces; ~40 microns thick epidermis; ~20% internal fat; well trimmed 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 589 834 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993983 190386 0.964833 0.994036 0.727169 22850 1 76 0.0022105 159 0 6.50126e+07 0.0350093 343455 6.54026e+07 3.37115e+06 22886 3.23802e+07 0 0.237664 0.994036 0.722832 6.50126e+07 0.00253907 1.40926e+07 6.80047e+06 1.42867e+07 154 1.42741e+07 8.72635e+06 0.00237478 1.41142e+07 49.7183 0.00525139 0.994089 0 50.3419 GTEX-1CAMQ-0326-SM-7MXUI 1 B1 2 pieces;10% internal fat 6.9 Muscle Muscle - Skeletal 0011907 590 833 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976703 138550 0.982616 0.986957 0.867108 19645 1 76 0.0029285 157 0 7.83485e+07 0.0171955 728466 7.93839e+07 1.27897e+07 19653 3.87132e+07 0 0.115507 0.986957 0.855799 7.83485e+07 0.00403638 1.66684e+07 1.17886e+07 1.67781e+07 196 1.70695e+07 1.51674e+07 0.00347669 1.70807e+07 50.0164 0.0091765 0.997211 0 50.1639 GTEX-1CAMQ-0426-SM-7IGPL 1 B1 2 pieces; one shows numerous medial calcifications (arrows) and fibrosclerotic plaque; other with attached up to 1.4mm fibrofatty stroma 5.8 Blood Vessel Artery - Tibial 0007610 592 831 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995032 171997 0.976189 0.995119 0.837531 21547 1 76 0.00187721 167 0 7.60779e+07 0.0234599 221267 7.6451e+07 3.15125e+06 21568 3.79072e+07 0 0.138658 0.995119 0.833443 7.60779e+07 0.0023693 1.63685e+07 5.33039e+06 1.65386e+07 186 1.65109e+07 1.49196e+07 0.00212324 1.64112e+07 49.8486 0.00289423 0.995206 0 50.2584 GTEX-1CAMQ-0526-SM-7RHGR 1 B1 2 pieces; 0.8mm and 1.0 mm of attached external fat and connective tissue 6.4 Nerve Nerve - Tibial 0001323 593 830 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990337 207864 0.965408 0.992909 0.741128 24874 1 76 0.00262752 218 0 9.19382e+07 0.0343468 352115 9.25949e+07 8.91978e+06 24919 4.57291e+07 0 0.22428 0.992909 0.735872 9.19382e+07 0.00414018 2.00986e+07 8.3372e+06 2.0259e+07 219 2.02774e+07 1.32281e+07 0.00338189 2.03059e+07 50.0352 0.00380275 0.99548 0 50.1988 GTEX-1CAMQ-0726-SM-7P8SG 1 B1 2 pieces; 10% internal fat 6.9 Heart Heart - Atrial Appendage 0006631 596 827 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.929833 332073 0.974731 0.962332 0.808968 23298 1 76 0.00460528 127 0 7.66768e+07 0.0250337 1.73793e+06 7.96781e+07 1.35459e+07 23321 3.69288e+07 0 0.165763 0.962332 0.778496 7.66768e+07 0.00889865 1.58858e+07 9.56295e+06 1.58477e+07 152 1.71063e+07 1.22024e+07 0.00667947 1.69439e+07 49.7615 0.0218119 0.994831 0 49.9399 GTEX-1CAMQ-1026-SM-7EPIC 1 B1 2 pieces; severe congestion; bronchial wall and desquamated bronchial epithelium and fragment of cartilage (outlined); anthracosis; thick walled pulmonary vessels (arrows); focal pleural coverage (outlined) 6.8 Lung Lung 0008952 608 815 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.9891 126420 0.974017 0.99123 0.742483 23287 1 76 0.0033824 116 0 8.4428e+07 0.025698 475020 8.5175e+07 1.12668e+07 23317 4.20172e+07 0 0.231534 0.99123 0.735972 8.4428e+07 0.0118318 1.86412e+07 9.94664e+06 1.87543e+07 138 1.87884e+07 1.28554e+07 0.007598 1.87774e+07 49.9853 0.00557699 0.993359 0 50.1513 GTEX-1CAMQ-1126-SM-7EWFE 0 B1 2 pieces; no pathologic changes noted 6.4 Thyroid Thyroid 0002046 609 814 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989414 135489 0.966225 0.991428 0.661904 22870 1 76 0.00263955 110 0 5.31245e+07 0.0335242 283510 5.35838e+07 4.76403e+06 22908 2.64122e+07 0 0.304321 0.991428 0.65623 5.31245e+07 0.00388368 1.16979e+07 5.4781e+06 1.17381e+07 118 1.17718e+07 6.1759e+06 0.00326035 1.17664e+07 49.9885 0.00529096 0.993442 0 50.0857 GTEX-1CAMQ-1226-SM-7SB7E 1 B1 2 pieces (one fragmented); lobulated mature adipose tissue with less than 5% fibrovascular component 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 611 812 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986896 181445 0.963703 0.989759 0.65471 24010 1 76 0.00304295 121 0 6.90567e+07 0.0360681 476483 6.97712e+07 7.99889e+06 24057 3.43101e+07 0 0.308993 0.989759 0.648005 6.90567e+07 0.00438117 1.50396e+07 9.0224e+06 1.5271e+07 139 1.53099e+07 8.08454e+06 0.00371013 1.51911e+07 49.8052 0.00682922 0.992622 0 50.3818 GTEX-1CAMQ-1326-SM-7P8RV 1 B1 6 pieces; ~ 5% internal (periadnexal) fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 613 810 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.933511 435869 0.962764 0.963634 0.754742 24295 1 76 0.00486938 148 0 7.43351e+07 0.0370723 1.23854e+06 7.71404e+07 1.139e+07 24327 3.58802e+07 0 0.208022 0.963634 0.727295 7.43351e+07 0.00882401 1.57155e+07 1.4672e+07 1.57281e+07 148 1.68743e+07 9.74806e+06 0.00678488 1.67634e+07 49.8352 0.0160557 0.993757 0 50.0201 GTEX-1CAMQ-1426-SM-7MKFL 0 B1 2 pieces; marked congestion 5.7 Liver Liver 0001114 616 807 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.977567 334717 0.9768 0.984996 0.84627 21867 1 76 0.00465291 266 0 9.36049e+07 0.023067 2.05413e+06 9.50307e+07 1.35104e+07 21886 4.6256e+07 0 0.13053 0.984996 0.833572 9.36049e+07 0.00571541 2.03646e+07 1.62982e+07 2.06859e+07 304 2.09622e+07 1.09087e+07 0.00518016 2.07002e+07 49.6856 0.0216154 0.992425 0 50.3913 GTEX-1CAMQ-1626-SM-7MGXG 2 B1 2 pieces; mildly periductal fibrosis (arrows); PanIN 1A changes in ducts 6 Pancreas Pancreas 0001150 619 804 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992142 129611 0.982083 0.994365 0.871173 19820 1 76 0.00269313 91 0 7.18359e+07 0.0175783 252863 7.2243e+07 5.59127e+06 19831 3.57786e+07 0 0.11091 0.994365 0.866264 7.18359e+07 0.00369847 1.66977e+07 2.72832e+07 1.68837e+07 102 1.68774e+07 2.38389e+07 0.00319468 1.6864e+07 49.9801 0.00350017 0.996587 0 50.2769 GTEX-1CAMQ-2226-SM-7MGWS 1 B1 2 pieces; fairly well preserved fibromuscular stroma and prostatic glandular component in 1 piece; not well preserved glands in the other 5.6 Prostate Prostate 0002367 640 783 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.98913 63244 0.96338 0.991229 0.753738 20446 1 76 0.00284797 104 0 2.27593e+07 0.0364615 308857 2.29607e+07 1.84225e+06 20458 1.13293e+07 0 0.209641 0.991229 0.747128 2.27593e+07 0.00375713 5.02704e+06 2.63056e+06 5.06234e+06 111 5.07682e+06 3.02296e+06 0.00330159 5.05907e+06 49.9124 0.0134515 0.993329 0 50.175 GTEX-1CAMQ-2526-SM-7MGWT 1 B1 6 pieces; well trimmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 652 771 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988778 145870 0.970123 0.991017 0.797223 22886 1 76 0.0029416 142 0 6.71513e+07 0.0297187 1.46731e+06 6.776e+07 5.28066e+06 22908 3.34216e+07 0 0.172899 0.991017 0.790062 6.71513e+07 0.00397208 1.45393e+07 6.41381e+06 1.47283e+07 166 1.47296e+07 7.98396e+06 0.00345568 1.46756e+07 49.9081 0.0216545 0.993257 0 50.3229 GTEX-1CAMQ-2626-SM-7IGNI 1 B1 6 pieces; target muscularis; small focus of submucosal gland (outlined) 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 654 769 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993426 322787 0.96942 0.994387 0.807348 23323 1 76 0.00230993 372 0 1.05937e+08 0.0303947 2.63524e+06 1.06535e+08 6.79552e+06 23354 5.27766e+07 0 0.162072 0.994387 0.802816 1.05937e+08 0.00328366 2.30046e+07 1.09601e+07 2.34181e+07 350 2.3319e+07 1.26181e+07 0.00279633 2.31947e+07 49.8663 0.0247359 0.995347 0 50.4453 GTEX-1CAMQ-2726-SM-7MKGD 0 B1 6 pieces;~0.2mm thick squamous epithelium ; submucosal glands in 3 of 6 samples (outlined); well dissected 6.8 Esophagus Esophagus - Mucosa 0006920 656 767 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.990741 348768 0.978126 0.992984 0.837709 21402 1 76 0.00298371 268 0 9.52581e+07 0.0214815 1.17928e+06 9.59311e+07 8.61554e+06 21415 4.73814e+07 0 0.140417 0.992984 0.831831 9.52581e+07 0.00407961 2.15546e+07 1.33442e+07 2.1674e+07 312 2.17734e+07 1.48817e+07 0.00353042 2.16667e+07 49.8772 0.012293 0.995228 0 50.1381 GTEX-1CAMR-0004-SM-7J3B6 B1 Blood Whole Blood 0013756 -266 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1CAMR-0004-SM-7MA7I B1 Blood Whole Blood 0013756 -266 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1CAMR-0006-SM-ACKV5 B1 7.4 Blood Whole Blood 0013756 -266 BP-54699 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.98892 927195 0.951188 0.990734 0.800564 18443 1 76 0.00312696 219 0 9.2816e+07 0.048274 329776 9.36841e+07 1.1603e+07 18455 4.61985e+07 0 0.150624 0.990734 0.793146 9.2816e+07 0.0044394 2.00881e+07 5.21791e+07 2.02917e+07 208 2.03257e+07 1.84639e+07 0.00378198 2.02268e+07 49.878 0.00352009 0.992548 0 50.2521 GTEX-1CAMR-0008-SM-EXURA B1 8.6 Skin Cells - Cultured fibroblasts EFO_0002009 345 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.992174 762334 0.9832 0.993795 0.866154 19292 1 76 0.00179141 163 0 7.67874e+07 0.0164957 133728 7.72668e+07 2.43888e+06 19302 3.8214e+07 0 0.117047 0.993795 0.860779 7.67874e+07 0.00229422 1.73221e+07 6.52754e+06 1.74127e+07 162 1.75539e+07 1.99548e+07 0.00204241 1.73001e+07 49.6359 0.00173073 0.995416 0 50.1303 GTEX-1CAMR-0126-SM-79391 1 B1 2 pieces, few nubbins of adherant fat up to ~1.5mm, delineated. 8.5 Adrenal Gland Adrenal Gland 0002369 127 581 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995111 283337 0.975903 0.995647 0.818597 20962 1 76 0.00185699 120 0 5.46241e+07 0.02367 558764 5.48629e+07 2.58157e+06 20981 2.71963e+07 0 0.157307 0.995647 0.815033 5.46241e+07 0.00230104 1.21866e+07 4.72746e+06 1.21748e+07 136 1.22409e+07 9.34103e+06 0.00207889 1.21476e+07 49.8086 0.0101847 0.996183 0 49.9758 GTEX-1CAMR-0226-SM-7DUGO 1 B1 2 pieces, no abnormalities 7.2 Thyroid Thyroid 0002046 129 579 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993063 359048 0.968603 0.99376 0.761606 24476 1 76 0.00281868 207 0 9.34443e+07 0.0309704 347214 9.40311e+07 8.29697e+06 24521 4.65387e+07 0 0.206997 0.99376 0.756853 9.34443e+07 0.00410078 2.05347e+07 1.04584e+07 2.06484e+07 222 2.0679e+07 1.48458e+07 0.00345928 2.05623e+07 49.8586 0.00369254 0.994456 0 50.138 GTEX-1CAMR-0326-SM-793AH 1 B1 2 pieces ~10% fascia/vascular elements 8.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 130 578 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995091 163552 0.977708 0.995476 0.82704 21402 1 76 0.00177869 123 0 5.65279e+07 0.0220078 168947 5.67848e+07 2.90978e+06 21416 2.81574e+07 0 0.150668 0.995476 0.823299 5.65279e+07 0.00215782 1.253e+07 3.93322e+06 1.2524e+07 134 1.25675e+07 1.11297e+07 0.00196818 1.25073e+07 49.8799 0.00297521 0.995861 0 49.988 GTEX-1CAMR-0526-SM-7P8RS 1 B1 5 pieces, confirmed target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 144 564 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.94471 291005 0.974736 0.970292 0.847941 22627 1 76 0.00395147 161 0 8.32538e+07 0.0250052 533670 8.58029e+07 1.23772e+07 22643 4.04198e+07 0 0.126794 0.970292 0.82275 8.32538e+07 0.00817652 1.73182e+07 8.77295e+06 1.72485e+07 187 1.82361e+07 1.4936e+07 0.0060083 1.8292e+07 50.0765 0.00621972 0.995873 0 49.8992 GTEX-1CAMR-0626-SM-7DHMI 1 B1 6 pieces, confirmed target muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 149 559 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6441,LCSET-6775 01/31/2015 TruSeq.v1 RNASEQ 0.99388 314297 0.976332 0.994911 0.836993 24096 1 76 0.0027273 381 0 1.38872e+08 0.0233389 631813 1.39582e+08 1.11005e+07 24119 6.92052e+07 0 0.139339 0.994911 0.832733 1.38872e+08 0.00392182 2.96162e+07 1.07718e+07 3.01165e+07 357 3.0033e+07 2.69152e+07 0.00332394 2.98311e+07 49.8314 0.00452646 0.995942 0 50.4188 GTEX-1CAMR-0726-SM-7EPIE 1 B1 6 pieces, mucosa well- preserved up to ~1mm, ~30% thickness. Deep microglandular dilation or gastropathic changes 6.9 Stomach Stomach 0000945 153 555 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.987296 185398 0.978245 0.989703 0.828288 22844 1 76 0.00300591 232 0 8.45195e+07 0.0213968 325207 8.53989e+07 1.13333e+07 22865 4.20951e+07 0 0.149957 0.989703 0.819759 8.45195e+07 0.0114966 1.90704e+07 5.74025e+07 1.94056e+07 169 1.94303e+07 1.94601e+07 0.00724094 1.92394e+07 49.7532 0.0038081 0.992111 0 50.4356 GTEX-1CAMR-0826-SM-7MKFK 1 B1 6 pieces, ~10-15% well -preserved target lymphoid aggregates; delineated 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 156 552 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980026 382145 0.970786 0.987299 0.80684 25312 1 76 0.0043006 212 0 9.40574e+07 0.0287236 791684 9.52674e+07 1.47726e+07 25336 4.65215e+07 0 0.163946 0.987299 0.796592 9.40574e+07 0.00499521 2.05975e+07 1.18434e+07 2.09184e+07 253 2.12105e+07 1.60141e+07 0.00464535 2.09483e+07 49.689 0.00831012 0.994571 0 50.3866 GTEX-1CAMR-0926-SM-7MXTD 1 B1 6 pieces, mucosa well- preserved up to ~0.5-1mm 7.1 Colon Colon - Transverse 0001157 159 549 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978023 99463 0.977123 0.987221 0.830337 21909 1 76 0.00311206 160 0 6.60507e+07 0.0223414 734676 6.69057e+07 9.72625e+06 21928 3.26604e+07 0 0.146786 0.987221 0.819726 6.60507e+07 0.00416961 1.46014e+07 1.08103e+07 1.45875e+07 161 1.48325e+07 1.06517e+07 0.00363591 1.49132e+07 50.1358 0.0109808 0.99642 0 49.9761 GTEX-1CAMR-1026-SM-7P8QI 1 B1 6 pieces, confirmed target muscularis 7.6 Colon Colon - Sigmoid 0001159 163 545 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.99175 325852 0.975962 0.993905 0.843446 23628 1 76 0.00284199 280 0 1.07149e+08 0.02375 829595 1.07806e+08 1.50972e+07 23653 5.33505e+07 0 0.132516 0.993905 0.838305 1.07149e+08 0.00376409 2.30561e+07 9.77628e+06 2.34624e+07 289 2.34971e+07 1.86824e+07 0.00330204 2.32337e+07 49.7182 0.00769524 0.99606 0 50.4367 GTEX-1CAMR-1126-SM-7MGXF 1 B1 2 pieces, well -preserved Islets present in rare numbers, rep. delineated 7.2 Pancreas Pancreas 0001150 170 538 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.99154 154737 0.979703 0.993829 0.868563 20828 1 76 0.00277156 105 0 6.97546e+07 0.0201118 189526 7.01877e+07 5.43673e+06 20840 3.47464e+07 0 0.11114 0.993829 0.863203 6.97546e+07 0.00360129 1.5964e+07 1.5357e+07 1.61007e+07 120 1.61297e+07 1.98639e+07 0.00318547 1.60914e+07 49.9406 0.00270027 0.996118 0 50.2132 GTEX-1CAMR-1326-SM-7PC1F 0 B1 6 pieces, no significant dermal fat; squamous epithelium is 30-40 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 171 537 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986128 348727 0.973245 0.989982 0.815846 24178 1 76 0.00345335 282 0 9.62975e+07 0.0265654 967597 9.7272e+07 1.48885e+07 24209 4.77972e+07 0 0.1574 0.989982 0.807672 9.62975e+07 0.00520493 2.11653e+07 1.21696e+07 2.13598e+07 279 2.139e+07 1.34741e+07 0.00432573 2.14887e+07 50.1151 0.00994733 0.993835 0 50.2287 GTEX-1CAMR-1426-SM-793BO 0 B1 2 pieces, fibroadipose and abundant peripheral nerve (delineated, rep) elements 7.8 Breast Breast - Mammary Tissue 0008367 174 534 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994423 260437 0.978601 0.99559 0.829666 22212 1 76 0.00289263 205 0 8.69718e+07 0.0211611 655997 8.73571e+07 1.24041e+07 22237 4.33563e+07 0 0.148935 0.99559 0.826007 8.69718e+07 0.00344589 1.92912e+07 8.41779e+06 1.9409e+07 227 1.94086e+07 1.47866e+07 0.00316894 1.9386e+07 49.9709 0.00750938 0.996757 0 50.1523 GTEX-1CAMR-1526-SM-79OLP 1 B1 2 pieces, spermatogenesis is present but appears reduced 7.1 Testis Testis 0000473 179 529 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.97775 263352 0.938944 0.981178 0.707963 31759 1 76 0.00509443 121 0 6.64704e+07 0.0607831 628065 6.77454e+07 1.54864e+07 31813 3.30709e+07 0 0.230981 0.981178 0.694638 6.64704e+07 0.00592753 1.41676e+07 8.65696e+06 1.42167e+07 121 1.43217e+07 1.02062e+07 0.00550952 1.42667e+07 49.9038 0.00927096 0.984607 0 50.0866 GTEX-1CAMR-1626-SM-79OLC 1 B1 2 pieces, abundant well-preserved glands 7 Prostate Prostate 0002367 181 527 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975547 219707 0.962033 0.979583 0.714755 24033 1 76 0.00529965 123 0 5.98372e+07 0.0376843 153697 6.10844e+07 1.4142e+07 24071 2.97577e+07 0 0.247278 0.979583 0.700163 5.98372e+07 0.00655345 1.30861e+07 6.58457e+06 1.31453e+07 116 1.32333e+07 8.52525e+06 0.00592396 1.32255e+07 49.9852 0.00251614 0.98362 0 50.1129 GTEX-1CAMR-1726-SM-793CU 0 B1 2 pieces, minimal interstitial fat; ~10% tendinous insertion, delineated 7.9 Muscle Muscle - Skeletal 0011907 343 365 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.994216 414867 0.981977 0.995526 0.870394 19382 1 76 0.00287058 172 0 7.17199e+07 0.0178164 528672 7.20422e+07 9.80976e+06 19391 3.57337e+07 0 0.111583 0.995526 0.8665 7.17199e+07 0.00351643 1.57565e+07 8.54291e+06 1.57968e+07 177 1.58721e+07 1.3777e+07 0.00319308 1.57657e+07 49.8319 0.00733836 0.996836 0 50.0638 GTEX-1CAMR-1826-SM-7MXUJ 0 B1 2 pieces, ~10% fascia/vascular elements; rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 344 364 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976789 160821 0.978286 0.98655 0.826444 21211 1 76 0.00304042 132 0 6.27674e+07 0.0214596 424154 6.36231e+07 9.73368e+06 21228 3.10191e+07 0 0.151842 0.98655 0.815328 6.27674e+07 0.00444209 1.3692e+07 7.87694e+06 1.37464e+07 146 1.3988e+07 1.02844e+07 0.00373432 1.40108e+07 50.0407 0.00666667 0.996311 0 50.099 GTEX-1CAMR-1926-SM-7EPI2 0 B1 6 pieces, no significant dermal fat, squamous epithelium is ~25-35 microns 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 345 363 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989622 314952 0.971725 0.992139 0.794675 24146 1 76 0.00315747 148 0 8.34047e+07 0.0280435 636942 8.40656e+07 1.11547e+07 24171 4.15087e+07 0 0.17705 0.992139 0.788428 8.34047e+07 0.0118162 1.82496e+07 1.04327e+07 1.84927e+07 152 1.85278e+07 1.32571e+07 0.00747586 1.84127e+07 49.8442 0.00757673 0.994657 0 50.3309 GTEX-1CAMR-2126-SM-7PBYX 0 B1 2 pieces, rim of fibrous tissue, ~0.5-1mm, both sections 7.7 Blood Vessel Artery - Tibial 0007610 348 360 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.990384 118925 0.977366 0.993626 0.875988 20427 1 76 0.00270953 277 0 9.43703e+07 0.0222217 375607 9.49757e+07 1.34119e+07 20435 4.69303e+07 0 0.101378 0.993626 0.870404 9.43703e+07 0.00434425 1.99911e+07 7.36608e+06 2.02573e+07 274 2.02529e+07 1.95173e+07 0.00352422 2.02771e+07 50.0299 0.00395477 0.996867 0 50.3307 GTEX-1CAMS-0003-SM-7J3B7 B1 Blood Whole Blood 0013756 -31 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1CAMS-0003-SM-7MA7J B1 Blood Whole Blood 0013756 -31 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1CAMS-0005-SM-ARL6Y B1 8.9 Blood Whole Blood 0013756 -31 BP-54699 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.989767 911973 0.966209 0.989915 0.831369 17461 1 76 0.00183745 119 0 6.69603e+07 0.033326 292260 6.76425e+07 3.01086e+06 17468 3.32744e+07 0 0.134841 0.989915 0.822984 6.69603e+07 0.00239735 1.49224e+07 4.26434e+07 1.49191e+07 134 1.51493e+07 1.6105e+07 0.00211736 1.47116e+07 49.2671 0.00432066 0.990062 0 49.9945 GTEX-1CAMS-0008-SM-EXURB B1 8.7 Skin Cells - Cultured fibroblasts EFO_0002009 358 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.994007 766380 0.983392 0.994653 0.866442 19854 1 76 0.00138172 183 0 8.73335e+07 0.0162646 143578 8.7803e+07 2.05378e+06 19870 4.35176e+07 0 0.11695 0.994653 0.861809 8.73335e+07 0.00188017 1.96469e+07 7.38089e+06 1.97668e+07 194 1.98482e+07 2.29271e+07 0.00163078 1.9621e+07 49.7122 0.00163523 0.995298 0 50.1521 GTEX-1CAMS-0126-SM-79396 1 B1 2 pieces; ~10 to 15% internal fat 8.8 Muscle Muscle - Skeletal 0011907 349 615 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993646 419088 0.982093 0.994778 0.875104 18403 1 76 0.00190314 132 0 5.56465e+07 0.017692 442978 5.59386e+07 4.25651e+06 18410 2.76934e+07 0 0.106989 0.994778 0.870534 5.56465e+07 0.00264256 1.21946e+07 4.85705e+06 1.221e+07 139 1.23102e+07 1.15062e+07 0.00227243 1.21511e+07 49.6747 0.00791901 0.99591 0 50.0315 GTEX-1CAMS-0226-SM-79397 1 B1 2 pieces; adrenal cortex; up to 4mm (20%) external fat attached to one sample 9.5 Adrenal Gland Adrenal Gland 0002369 355 609 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993389 493721 0.978718 0.994419 0.842008 21195 1 76 0.00221725 120 0 5.5392e+07 0.0208005 643596 5.57028e+07 4.23333e+06 21212 2.75428e+07 0 0.13671 0.994419 0.837309 5.5392e+07 0.00278171 1.23554e+07 4.7304e+06 1.23073e+07 132 1.24554e+07 1.06777e+07 0.00249919 1.22588e+07 49.6023 0.0115541 0.99545 0 49.9025 GTEX-1CAMS-0326-SM-7PC35 1 B1 2 fragmented pieces; mature adipose tissue and 5% and 10% fibrovascular component 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 357 607 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985999 422135 0.980579 0.990491 0.838905 22601 1 76 0.00319427 278 0 1.04152e+08 0.0191136 673328 1.05152e+08 1.71826e+07 22631 5.16839e+07 0 0.141675 0.990491 0.830928 1.04152e+08 0.00499362 2.29156e+07 1.08903e+07 2.30999e+07 292 2.33256e+07 1.9933e+07 0.00408987 2.31351e+07 49.795 0.00640338 0.994982 0 50.2002 GTEX-1CAMS-0426-SM-7P8T2 1 B1 6 pieces; ~36 microns thick epidermis; ~10 to 15% internal fat (periadnexal) 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 360 604 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.945525 313570 0.969057 0.97051 0.81175 24363 1 76 0.00426609 150 0 7.55e+07 0.0307196 955937 7.77942e+07 1.14873e+07 24384 3.6678e+07 0 0.157308 0.97051 0.787811 7.55e+07 0.00809638 1.61332e+07 1.18818e+07 1.61224e+07 159 1.70764e+07 1.27274e+07 0.00613193 1.70264e+07 49.9267 0.012288 0.995494 0 49.9833 GTEX-1CAMS-0526-SM-7EWEX 1 B1 2 pieces; 20% and 10% internal fat 6.5 Nerve Nerve - Tibial 0001323 363 601 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444,LCSET-6865 02/18/2015 TruSeq.v1 RNASEQ 0.990673 220564 0.971047 0.993083 0.749881 24938 1 76 0.00230636 283 0 1.02117e+08 0.0286648 416075 1.02829e+08 7.68192e+06 25000 5.08065e+07 0 0.221166 0.993083 0.744694 1.02117e+08 0.00339631 2.25066e+07 9.45256e+06 2.26158e+07 264 2.26565e+07 1.6258e+07 0.00285001 2.2705e+07 50.0535 0.0040463 0.995493 0 50.1211 GTEX-1CAMS-0626-SM-7PBYY 1 B1 2 pieces; patent vessels with attached adventitia, ~1.0mm and 0.5mm; no plaques 8 Blood Vessel Artery - Tibial 0007610 365 599 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989641 166708 0.978751 0.992942 0.860816 21423 1 76 0.00267141 282 0 9.34832e+07 0.020786 427477 9.41478e+07 1.1971e+07 21432 4.64783e+07 0 0.117936 0.992942 0.85474 9.34832e+07 0.00456838 2.0195e+07 7.57265e+06 2.03946e+07 269 2.04586e+07 1.91578e+07 0.00361674 2.04199e+07 49.9527 0.00454049 0.996243 0 50.2458 GTEX-1CAMS-0826-SM-7P8P1 1 B1 2 pieces; accentuation of interstitial fibrosis with focal scarring (arrows) 6.2 Thyroid Thyroid 0002046 399 565 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.98716 281793 0.964771 0.989096 0.757105 25145 1 76 0.00293144 275 0 1.1462e+08 0.0349447 806024 1.15883e+08 1.47404e+07 25198 5.70648e+07 0 0.207665 0.989096 0.74885 1.1462e+08 0.00417891 2.49211e+07 1.27668e+07 2.5264e+07 304 2.53421e+07 1.60574e+07 0.00355395 2.50476e+07 49.7077 0.00695548 0.991032 0 50.3416 GTEX-1CAMS-0926-SM-7SB7F 1 B1 2 pieces; focal preserved mesothelial lining (arrow) 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 400 564 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989254 302156 0.96968 0.992052 0.727227 24653 1 76 0.00269042 208 0 9.38367e+07 0.0300409 821737 9.45884e+07 1.08563e+07 24705 4.66814e+07 0 0.242452 0.992052 0.721448 9.38367e+07 0.00421834 2.05416e+07 1.20073e+07 2.07824e+07 214 2.08596e+07 1.49182e+07 0.00345223 2.07128e+07 49.8234 0.0086875 0.994851 0 50.2913 GTEX-1CAMS-1026-SM-7PC2I 1 B1 6 pieces; ~1.0mm attached adventitia 7.3 Blood Vessel Artery - Aorta 0001496 404 560 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988597 432623 0.974234 0.991654 0.809586 23874 1 76 0.00351152 281 0 1.12002e+08 0.0253825 499143 1.12944e+08 1.89718e+07 23904 5.563e+07 0 0.164648 0.991654 0.80283 1.12002e+08 0.00445978 2.40814e+07 1.00042e+07 2.44179e+07 305 2.45271e+07 2.02144e+07 0.00398419 2.42961e+07 49.7634 0.00441937 0.994711 0 50.347 GTEX-1CAMS-1126-SM-7MXUQ 1 B1 2 pieces; ~20% internal fat 7.4 Heart Heart - Atrial Appendage 0006631 405 559 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976378 104553 0.977056 0.98667 0.820628 22175 1 76 0.00283565 153 0 7.02928e+07 0.022733 1.37142e+06 7.12424e+07 1.17617e+07 22193 3.47304e+07 0 0.156428 0.98667 0.809689 7.02928e+07 0.00397784 1.51306e+07 1.2062e+07 1.51639e+07 183 1.5448e+07 1.0434e+07 0.00340079 1.54939e+07 50.0742 0.0192501 0.996963 0 50.0549 GTEX-1CAMS-1226-SM-79393 1 B1 2 pieces; ~0.6mm of attached adventitia; partial mild plaque in 1 8.7 Blood Vessel Artery - Coronary 0001621 409 555 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.995408 205869 0.976407 0.995808 0.838775 20744 1 76 0.00176558 125 0 5.81352e+07 0.0231165 183036 5.838e+07 2.77557e+06 20755 2.8957e+07 0 0.137633 0.995808 0.835259 5.81352e+07 0.00213469 1.25893e+07 3.87979e+06 1.25752e+07 135 1.26098e+07 1.23021e+07 0.00195006 1.2579e+07 49.9388 0.00313525 0.996208 0 49.972 GTEX-1CAMS-1326-SM-79OJR 1 B1 2 pieces; 2% internal fat (arrows) 7 Heart Heart - Left Ventricle 0006566 411 553 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.97493 228041 0.978668 0.979031 0.825144 21026 1 76 0.00517146 123 0 6.42139e+07 0.0211388 1.47314e+06 6.55893e+07 1.58182e+07 21039 3.19427e+07 0 0.153523 0.979031 0.807842 6.42139e+07 0.00647555 1.41298e+07 8.99502e+06 1.42532e+07 148 1.43591e+07 9.65260e+06 0.00582077 1.42552e+07 49.8184 0.0224601 0.983133 0 50.2175 GTEX-1CAMS-1426-SM-7IGPM 1 B1 2 pieces; atrophic ducts & lobules in mainly fibrous stroma 5.9 Breast Breast - Mammary Tissue 0008367 415 549 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994729 196876 0.972907 0.994898 0.78789 23733 1 76 0.00198123 155 0 6.96338e+07 0.026501 352017 6.99909e+07 2.85287e+06 23766 3.46906e+07 0 0.185017 0.994898 0.783869 6.96338e+07 0.00234866 1.53584e+07 7.37466e+06 1.5509e+07 157 1.54967e+07 1.36339e+07 0.00216491 1.53886e+07 49.8249 0.00502947 0.995066 0 50.2441 GTEX-1CAMS-1626-SM-79394 1 B1 6 pieces; target muscularis 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 423 541 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.994203 215915 0.975427 0.995281 0.817945 21667 1 76 0.00215758 143 0 6.20732e+07 0.0242298 389312 6.23675e+07 4.68893e+06 21685 3.09202e+07 0 0.157483 0.995281 0.814084 6.20732e+07 0.00267424 1.35421e+07 4.90155e+06 1.35771e+07 145 1.36161e+07 1.16188e+07 0.00241563 1.35677e+07 49.911 0.00624223 0.996358 0 50.0645 GTEX-1CAMS-1926-SM-7DUEU 1 B1 2 pieces; ~10 % internal fat; accentuation of periductal fibrosis; Langerhans islets present (rep outlined) 7.3 Pancreas Pancreas 0001150 431 533 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993361 713019 0.969833 0.994289 0.809998 24887 1 76 0.00269854 378 0 1.60886e+08 0.0298526 426717 1.6181e+08 1.3973e+07 24933 8.01323e+07 0 0.159835 0.994289 0.805372 1.60886e+08 0.0040987 3.64344e+07 3.6246e+07 3.68699e+07 333 3.69651e+07 4.14266e+07 0.00339797 3.6496e+07 49.6807 0.00263714 0.995217 0 50.297 GTEX-1CAMS-2026-SM-79395 1 B1 2 pieces; myometrium and foci of endometrial glands (outlined) 8.6 Uterus Uterus 0000995 438 526 BP-56484 RNA Extraction from Paxgene-derived Lysate Plate Based 09/10/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992391 300348 0.973574 0.99378 0.7938 21338 1 76 0.00218278 125 0 5.63942e+07 0.0261141 91339 5.67472e+07 4.27073e+06 21355 2.80612e+07 0 0.179774 0.99378 0.788862 5.63942e+07 0.0030079 1.23108e+07 4.3422e+06 1.23345e+07 130 1.23801e+07 1.04391e+07 0.00259476 1.2342e+07 49.923 0.00160958 0.995168 0 50.0481 GTEX-1CAMS-2126-SM-7MXTF 1 B1 2 pieces; ovarian cortex with follicles, corpora lutea and corpora albicantia 8.4 Ovary Ovary 0000992 439 525 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977484 181241 0.967888 0.986905 0.773624 24160 1 76 0.00293033 144 0 7.70926e+07 0.0317804 111327 7.81155e+07 1.2061e+07 24196 3.81036e+07 0 0.194264 0.986905 0.763494 7.70926e+07 0.00396938 1.67671e+07 9.25939e+06 1.68622e+07 160 1.71738e+07 1.47492e+07 0.0034449 1.71433e+07 49.9555 0.00142516 0.996327 0 50.1413 GTEX-1CAMS-2226-SM-7PBXQ 1 B1 6 pieces; 5 to 10% internal fat 5.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 440 524 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98602 325045 0.970156 0.990464 0.789568 24192 1 76 0.00294574 376 0 1.11761e+08 0.0296864 1.92063e+06 1.12837e+08 1.48783e+07 24225 5.55002e+07 0 0.180588 0.990464 0.782038 1.11761e+08 0.0054521 2.45197e+07 1.89691e+07 2.48424e+07 381 2.48088e+07 1.33849e+07 0.00419329 2.50208e+07 50.2127 0.0170212 0.994907 0 50.3269 GTEX-1CAMS-2326-SM-793CR 0 B1 6 pieces; 7.6 Vagina Vagina 0000996 441 523 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99169 615227 0.972779 0.993349 0.752366 22657 1 76 0.00298388 131 0 6.65291e+07 0.0269999 82426 6.69745e+07 9.85321e+06 22684 3.31054e+07 0 0.220413 0.993349 0.747362 6.65291e+07 0.00384777 1.48012e+07 8.34652e+06 1.47402e+07 138 1.48411e+07 1.19071e+07 0.00341511 1.48105e+07 49.9485 0.00123071 0.995008 0 49.8967 GTEX-1CAMS-2426-SM-7DHMV 1 B1 6 pieces; irregularly distributed target lymphoid aggregates (outlined) in half of the pieces; well dissectedmucosa & sumucosa 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 446 518 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990232 248754 0.97575 0.991374 0.793921 24858 1 76 0.00377273 171 0 8.39299e+07 0.0236757 331317 8.46602e+07 6.89383e+06 24895 4.17437e+07 0 0.181828 0.991374 0.787073 8.39299e+07 0.00542636 1.86755e+07 8.51019e+06 1.88365e+07 176 1.89036e+07 1.60218e+07 0.00459859 1.86956e+07 49.7234 0.00391349 0.992515 0 50.2147 GTEX-1CAMS-2526-SM-7EPH7 1 B1 6 pieces; grade 1 to 2 autolysed colonic mucosa; irregularly distributed lymphoid aggregates; 3 of 6 samples contain muscularis (outlined) 6.9 Colon Colon - Transverse 0001157 449 515 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.988264 186287 0.969561 0.990683 0.792487 24938 1 76 0.00367463 138 0 8.32584e+07 0.028111 557725 8.40414e+07 1.1421e+07 24977 4.13797e+07 0 0.177075 0.990683 0.785103 8.32584e+07 0.0120331 1.83942e+07 1.30548e+07 1.86539e+07 141 1.87127e+07 1.41508e+07 0.00784367 1.85173e+07 49.7375 0.00663631 0.993101 0 50.3504 GTEX-1CAMS-2626-SM-7PBY3 1 B1 6 pieces; target muscularis and up to 1.5mm submucosa; scattered insignificant fragmented colonic glands (outlined) 7.9 Colon Colon - Sigmoid 0001159 452 512 BP-57386 RNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989387 190732 0.975854 0.992774 0.835725 24005 1 76 0.00278609 278 0 1.12114e+08 0.023865 618053 1.1293e+08 1.33193e+07 24035 5.57524e+07 0 0.140129 0.992774 0.829686 1.12114e+08 0.00422692 2.42864e+07 1.0837e+07 2.45386e+07 313 2.4602e+07 2.0649e+07 0.00350405 2.45782e+07 49.9758 0.00547287 0.99616 0 50.2583 GTEX-1CAV2-0003-SM-DIND8 B1 Blood Whole Blood 0013756 1145 BP-54666 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/03/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1CAV2-0008-SM-EXURC B1 8.7 Skin Cells - Cultured fibroblasts EFO_0002009 1247 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/20/2017 TruSeq.v1 RNASEQ 0.994007 792757 0.983535 0.994646 0.868192 19919 1 76 0.00155386 222 0 9.4239e+07 0.0161551 148873 9.47462e+07 2.16923e+06 19934 4.69631e+07 0 0.115343 0.994646 0.863544 9.4239e+07 0.00198744 2.11573e+07 8.08833e+06 2.12948e+07 217 2.13707e+07 2.48748e+07 0.00177051 2.1139e+07 49.7275 0.00157128 0.995285 0 50.1619 GTEX-1CAV2-0011-R11a-SM-ARU8D B1, A1 6.2 Brain Brain - Cerebellar Hemisphere 0002037 1143 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991541 298048 0.964961 0.993061 0.825023 21305 1 76 0.00374371 194 0 7.64693e+07 0.0348819 4.83115e+06 7.70037e+07 2.66777e+06 21317 3.80882e+07 0 0.139938 0.993061 0.819298 7.64693e+07 0.00447954 1.60055e+07 1.80334e+07 1.67722e+07 254 1.65528e+07 4.30287e+06 0.00411106 1.62924e+07 49.6037 0.0627392 0.994581 0 51.1696 GTEX-1CAV2-0011-R1a-SM-ARZML B1, A1 5.7 Brain Brain - Hippocampus 0001954 1143 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.982458 398623 0.971174 0.984762 0.792321 18686 1 76 0.00476411 149 0 6.35341e+07 0.0287488 7.72097e+06 6.45172e+07 2.94619e+06 18688 3.15672e+07 0 0.178853 0.984762 0.780248 6.35341e+07 0.00577822 1.23453e+07 4.7926e+07 1.35187e+07 170 1.32064e+07 3.30114e+06 0.00526998 1.27006e+07 49.0239 0.119673 0.987066 0 52.2684 GTEX-1CAV2-0011-R5b-SM-9QEH4 B1, A1 5.7 Brain Brain - Caudate (basal ganglia) 0001873 1143 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.988193 268153 0.975069 0.991824 0.82722 20390 1 76 0.00403822 266 0 9.06008e+07 0.0248604 8.04376e+06 9.13477e+07 4.35155e+06 20397 4.50809e+07 0 0.147849 0.991824 0.820457 9.06008e+07 0.00624053 1.84282e+07 4.39918e+07 1.93781e+07 308 1.89225e+07 3.90351e+06 0.00513535 1.90796e+07 50.2068 0.0880566 0.995456 0 51.2563 GTEX-1CAV2-0011-R9b-SM-9WG5M B1, A1 5.7 Brain Brain - Spinal cord (cervical c-1) 0006469 1143 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991979 474036 0.950508 0.994435 0.816689 21662 1 76 0.00318718 309 0 9.34628e+07 0.0492068 5.21568e+06 9.39858e+07 6.448e+06 21680 4.65113e+07 0 0.133819 0.994435 0.812144 9.34628e+07 0.00483351 2.03042e+07 1.65204e+07 2.08562e+07 330 2.04437e+07 1.0017e+07 0.00400831 2.09402e+07 50.5999 0.0554943 0.99689 0 50.6705 GTEX-1CAV2-0126-SM-7IGN7 1 B1 6 pieces; 3 pieces well preserved, 3 have dermal edema 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1165 846 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99322 563274 0.973576 0.994024 0.748794 26500 1 76 0.00239738 385 0 1.60277e+08 0.0260887 579042 1.6124e+08 1.02416e+07 26568 7.98378e+07 0 0.224782 0.994024 0.744319 1.60277e+08 0.00313928 3.50598e+07 1.87847e+07 3.53766e+07 378 3.53702e+07 2.57208e+07 0.00276803 3.51928e+07 49.8743 0.00359117 0.994828 0 50.2249 GTEX-1CAV2-0226-SM-7IGPQ 1 B1 2 pieces; lobulated fatty tissue; low fibrous content 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1168 843 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993613 136287 0.978688 0.993726 0.754947 21595 1 76 0.00220841 139 0 6.23226e+07 0.0209939 242727 6.2716e+07 2.82862e+06 21621 3.10369e+07 0 0.223741 0.993726 0.750211 6.23226e+07 0.00267553 1.38054e+07 8.20324e+06 1.39472e+07 147 1.39562e+07 1.01495e+07 0.00244194 1.38092e+07 49.7353 0.00387026 0.99384 0 50.2555 GTEX-1CAV2-0626-SM-7P8QE 1 B1 2 pieces; alveolar edema & hemorrhage; delicate well preserved infrastructure 5.9 Lung Lung 0008952 1190 821 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989242 413586 0.964988 0.991245 0.747409 24882 1 76 0.00323589 271 0 1.01463e+08 0.0347821 329978 1.02359e+08 1.39656e+07 24922 5.04836e+07 0 0.217579 0.991245 0.740866 1.01463e+08 0.00445699 2.18845e+07 1.26565e+07 2.21801e+07 284 2.2194e+07 1.37172e+07 0.00384521 2.20638e+07 49.8529 0.00322374 0.993248 0 50.3354 GTEX-1CAV2-1426-SM-7MGX6 2 B1 2 pieces; small focus of autolyzed, atrophic endometrium [labeled]; remainder is preserved myometrium 5.6 Uterus Uterus 0000995 1207 804 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990815 131102 0.965679 0.992597 0.743559 21026 1 76 0.00290198 105 0 4.0399e+07 0.0340789 102781 4.07003e+07 3.04832e+06 21043 2.01124e+07 0 0.22212 0.992597 0.738054 4.0399e+07 0.0038093 8.78242e+06 4.377e+06 8.82249e+06 106 8.84384e+06 6.13704e+06 0.00335483 8.83183e+06 49.966 0.00252531 0.994379 0 50.1138 GTEX-1CAV2-1626-SM-7IGQ6 1 B1 2 pieces; cortex with 10% fat 5.9 Adrenal Gland Adrenal Gland 0002369 1212 799 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6446 03/04/2015 TruSeq.v1 EXCLUDE 0.963508 7.92528e+06 0.633516 0.964713 0.399898 18572 1 76 0.0018624 91 0 7.4123e+07 0.364613 2.20078e+06 7.68342e+07 2.09399e+06 18591 3.68884e+07 0 0.233618 0.964713 0.385787 7.4123e+07 0.0022942 1.01008e+07 2.96e+08 1.08559e+07 99 1.0816e+07 4.60842e+06 0.00207803 1.03456e+07 48.8887 0.0286432 0.965919 0 51.8015 GTEX-1CAV2-2226-SM-7P8P2 1 B1 6 pieces; well trimmed, well preserved 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1248 763 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989467 360363 0.975251 0.991644 0.840011 23717 1 76 0.00333385 299 0 1.08895e+08 0.0244016 683588 1.09813e+08 1.46384e+07 23743 5.41975e+07 0 0.135241 0.991644 0.832991 1.08895e+08 0.00497191 2.3459e+07 1.60964e+07 2.38203e+07 318 2.38798e+07 1.86823e+07 0.00415108 2.36173e+07 49.7236 0.00622502 0.993821 0 50.3822 GTEX-1CAV2-2426-SM-7P8QF 1 B1 2 pieces: 1 has 10% neurovascular fatty tissue 7.7 Muscle Muscle - Skeletal 0011907 1251 760 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991177 456064 0.985348 0.993759 0.873368 20292 1 76 0.00314126 271 0 1.19109e+08 0.0143654 1.09274e+06 1.19857e+08 1.61002e+07 20309 5.92792e+07 0 0.11198 0.993759 0.867917 1.19109e+08 0.00469626 2.54614e+07 1.38943e+07 2.591e+07 289 2.59621e+07 2.44728e+07 0.00391674 2.56719e+07 49.719 0.00911699 0.99634 0 50.4366 GTEX-1CAV2-2526-SM-7IGQ7 1 B1 2 pieces; 10% internall fatty tissue 5.8 Nerve Nerve - Tibial 0001323 1253 758 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993871 214847 0.967285 0.994083 0.742626 23721 1 76 0.0022485 171 0 7.51786e+07 0.0323839 231619 7.56261e+07 2.78927e+06 23758 3.74628e+07 0 0.224659 0.994083 0.738232 7.51786e+07 0.00262382 1.64612e+07 7.091e+06 1.66137e+07 168 1.65991e+07 1.16494e+07 0.00243612 1.64918e+07 49.8378 0.00306269 0.994296 0 50.2306 GTEX-1CAV2-2626-SM-7MGX7 1 B1 2 pieces; large fibrocalcific plaques; abundant external fibrofatty tissue in one 5.7 Blood Vessel Artery - Tibial 0007610 1258 753 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.987861 69698 0.976974 0.99011 0.821499 21714 1 76 0.0028625 131 0 6.06692e+07 0.0225879 192351 6.12753e+07 4.89709e+06 21732 3.0195e+07 0 0.155475 0.99011 0.813374 6.06692e+07 0.00358536 1.31517e+07 6.45409e+06 1.32577e+07 138 1.3242e+07 1.18307e+07 0.00322311 1.33008e+07 50.1106 0.00313913 0.992358 0 50.2008 GTEX-1CAV2-2726-SM-7IGNN 1 B1 2 pieces 6.2 Brain Brain - Cortex 0001870 1283 728 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.995145 319489 0.972733 0.996023 0.832702 21823 1 76 0.00378553 371 0 9.7111e+07 0.0270227 6.8392e+06 9.74987e+07 5.78871e+06 21838 4.84254e+07 0 0.140031 0.996023 0.829391 9.7111e+07 0.00455657 1.99843e+07 3.49326e+07 2.13651e+07 337 2.07464e+07 6.36762e+06 0.00417071 2.06198e+07 49.847 0.0701466 0.996902 0 51.6697 GTEX-1CB4E-0001-SM-DIND6 B1 Blood Whole Blood 0013756 -51 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1CB4E-0001-SM-DLIOY B1 Blood Whole Blood 0013756 -51 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1CB4E-0005-SM-ADEGS B1 8.9 Blood Whole Blood 0013756 -51 BP-54699 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.979595 766569 0.953667 0.986307 0.794862 18171 1 76 0.00359685 107 0 6.08392e+07 0.0459001 213054 6.16838e+07 6.94427e+06 18182 3.00844e+07 0 0.158805 0.986307 0.783978 6.08392e+07 0.00369552 1.32768e+07 4.92199e+07 1.34714e+07 115 1.36631e+07 1.30858e+07 0.00364585 1.34693e+07 49.6428 0.00345397 0.99302 0 50.3638 GTEX-1CB4E-0008-SM-EXURD B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 566 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/20/2017 TruSeq.v1 RNASEQ 0.992998 1.08975e+06 0.983526 0.993813 0.858385 20341 1 76 0.00143411 191 0 9.14167e+07 0.0161293 226094 9.19857e+07 1.92532e+06 20360 4.55212e+07 0 0.125141 0.993813 0.853074 9.14167e+07 0.00185244 2.06563e+07 7.56521e+06 2.07543e+07 200 2.08862e+07 2.41041e+07 0.0016431 2.05974e+07 49.6518 0.00245792 0.994629 0 50.1184 GTEX-1CB4E-0126-SM-7DHMX 1 B1 2 pieces; moderately congested with well defined lymphoid nodules 8 Spleen Spleen 0002106 56 955 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990192 110225 0.966119 0.991359 0.77849 23847 1 76 0.00387649 136 0 7.06916e+07 0.0328811 435838 7.13077e+07 5.37751e+06 23872 3.51627e+07 0 0.18763 0.991359 0.771763 7.06916e+07 0.00555347 1.55724e+07 7.336e+06 1.57241e+07 150 1.57523e+07 1.14894e+07 0.00471399 1.56211e+07 49.7909 0.00611207 0.992526 0 50.2425 GTEX-1CB4E-0226-SM-79OLW 1 B1 2 pieces; dense fibrous stroma and slight ductal hyperplasia consistent with gynecomastoid hyperplasia 7.1 Breast Breast - Mammary Tissue 0008367 313 698 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977383 164241 0.97124 0.980988 0.800448 24071 1 76 0.00500169 144 0 6.60656e+07 0.028473 401968 6.7346e+07 1.49812e+07 24099 3.28796e+07 0 0.170792 0.980988 0.78523 6.60656e+07 0.00594196 1.44584e+07 6.87032e+06 1.45405e+07 142 1.46055e+07 1.16066e+07 0.00547009 1.46136e+07 50.0139 0.0059687 0.984593 0 50.1416 GTEX-1CB4E-0326-SM-7MXT3 1 B1 2 pieces; 10% fat and 5% fibrous contents 6.3 Thyroid Thyroid 0002046 323 688 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.984908 142080 0.967857 0.990486 0.778215 24529 1 76 0.00269474 272 0 9.08832e+07 0.0319162 923735 9.17562e+07 1.06216e+07 24560 4.51105e+07 0 0.189642 0.990486 0.770811 9.08832e+07 0.00369052 1.98005e+07 1.19254e+07 1.98961e+07 258 2.00462e+07 1.21371e+07 0.00318983 2.01098e+07 50.0792 0.0100673 0.996063 0 50.1204 GTEX-1CB4E-0426-SM-7PBY5 1 B1 6 pieces; all have fibrofatty adventitia up to 0.8 mm thick; minimal flat plaques; good looking fibroelastic media 7.8 Blood Vessel Artery - Aorta 0001496 327 684 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987319 163933 0.974478 0.991583 0.843556 22280 1 76 0.00276201 277 0 1.01382e+08 0.0251545 444010 1.02242e+08 1.38593e+07 22302 5.03578e+07 0 0.130922 0.991583 0.836456 1.01382e+08 0.00480952 2.16456e+07 7.74972e+06 2.18913e+07 301 2.19498e+07 1.88219e+07 0.00378137 2.19894e+07 50.0451 0.00434272 0.995847 0 50.2822 GTEX-1CB4E-0526-SM-7MXTK 1 B1 2 pieces; no scars 8.2 Heart Heart - Left Ventricle 0006566 331 680 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976051 133016 0.984733 0.986333 0.85811 21126 1 76 0.0028479 269 0 9.25546e+07 0.0150202 2.20177e+06 9.38371e+07 1.38929e+07 21136 4.57338e+07 0 0.126622 0.986333 0.846382 9.25546e+07 0.00393919 2.01238e+07 2.29865e+07 2.00846e+07 259 2.03498e+07 1.55686e+07 0.00338785 2.06961e+07 50.4219 0.0234638 0.996614 0 49.9512 GTEX-1CB4E-0626-SM-7DHMW 1 B1 2 pieces; 20% internal fat content in 1, 10% fibrous content in other 8.4 Heart Heart - Atrial Appendage 0006631 337 674 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992517 201776 0.9764 0.99367 0.822553 23110 1 76 0.0033446 199 0 7.89068e+07 0.023317 1.54436e+06 7.94095e+07 5.66347e+06 23129 3.92949e+07 0 0.153847 0.99367 0.817346 7.89068e+07 0.00481054 1.7243e+07 8.8967e+06 1.74297e+07 210 1.74295e+07 1.28826e+07 0.00407672 1.73119e+07 49.8307 0.019448 0.994822 0 50.2692 GTEX-1CB4E-0726-SM-7EWEY 1 B1 2 pieces; admixture of arterial, venous, myocardial & stromal tissues; LCM 6.3 Blood Vessel Artery - Coronary 0001621 346 665 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.993066 82849 0.972598 0.994891 0.826007 22114 1 76 0.00216467 133 0 6.27407e+07 0.0270552 450559 6.30629e+07 5.29031e+06 22131 3.12448e+07 0 0.146592 0.994891 0.821787 6.27407e+07 0.00330599 1.35933e+07 4.67233e+06 1.36957e+07 149 1.36675e+07 1.11573e+07 0.00273428 1.37269e+07 50.1084 0.0071446 0.996716 0 50.1876 GTEX-1CB4E-0826-SM-793CS 1 B1 2 pieces; lobulated fat with 5% fibrous content 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 351 660 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993852 431680 0.977701 0.995299 0.834772 22636 1 76 0.00280169 154 0 7.18459e+07 0.022025 489462 7.21853e+07 9.86576e+06 22657 3.57874e+07 0 0.142929 0.995299 0.830848 7.18459e+07 0.00356727 1.59103e+07 6.2153e+06 1.59681e+07 167 1.60029e+07 1.34252e+07 0.00318392 1.59754e+07 49.957 0.00678063 0.996745 0 50.0907 GTEX-1CB4E-0926-SM-7EPHT 1 B1 6 pieces; up to 20% dermal fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 360 651 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.99035 240223 0.965299 0.992725 0.755071 23694 1 76 0.0031277 128 0 7.24824e+07 0.0344987 869732 7.30136e+07 9.69924e+06 23728 3.61005e+07 0 0.210229 0.992725 0.749577 7.24824e+07 0.011666 1.58593e+07 1.08883e+07 1.60668e+07 128 1.60845e+07 1.08696e+07 0.00738664 1.60037e+07 49.874 0.0119119 0.9951 0 50.325 GTEX-1CB4E-1026-SM-793AB 1 B1 6 pieces; prominent fibrous submucosa up to 40% 8.6 Esophagus Esophagus - Mucosa 0006920 365 646 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.994817 244049 0.97949 0.995496 0.853508 20066 1 76 0.00193899 121 0 5.09476e+07 0.0200124 279807 5.11781e+07 2.23528e+06 20077 2.5388e+07 0 0.125982 0.995496 0.849664 5.09476e+07 0.00237855 1.15225e+07 6.31723e+06 1.15715e+07 119 1.16324e+07 1.12463e+07 0.00215862 1.14965e+07 49.7061 0.00546732 0.996175 0 50.1061 GTEX-1CB4E-1126-SM-79OOM 1 B1 6 pieces; 2 pieces have 4 foci of vegetable material, ~0.2mm, embedded in submucosa [labeled] consistent with carry-over as they are not present in submucosa of 1025 6.6 Esophagus Esophagus - Muscularis 0004648 370 641 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.993405 194987 0.974191 0.99374 0.832601 22557 1 76 0.00278006 213 0 8.75948e+07 0.0255251 1.3939e+06 8.81466e+07 7.03192e+06 22578 4.36278e+07 0 0.14159 0.99374 0.827388 8.75948e+07 0.00374205 1.8888e+07 7.76038e+06 1.90487e+07 246 1.89984e+07 1.46412e+07 0.00326089 1.89636e+07 49.9541 0.0158134 0.994075 0 50.2117 GTEX-1CB4E-1226-SM-7MKFX 1 B1 6 pieces; well dissected muscle 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 379 632 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982942 420032 0.977699 0.989446 0.860575 23530 1 76 0.00384549 280 0 1.05531e+08 0.0219312 1.29771e+06 1.06657e+08 1.60539e+07 23551 5.22526e+07 0 0.117124 0.989446 0.851493 1.05531e+08 0.00531769 2.25151e+07 1.01624e+07 2.29022e+07 289 2.31604e+07 1.98019e+07 0.00457675 2.28794e+07 49.6949 0.0121671 0.99595 0 50.4262 GTEX-1CB4E-1326-SM-7DUGD 1 B1 6 pieces; muscularis propria only with adherent loose fibrous submucosa; NO mucosa; may be useful for study of mucosa free muscularis 7.4 Stomach Stomach 0000945 384 627 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991367 222467 0.978729 0.992361 0.872036 22494 1 76 0.00260635 280 0 9.3776e+07 0.0209382 977187 9.44979e+07 8.45381e+06 22508 4.67146e+07 0 0.106693 0.992361 0.865374 9.3776e+07 0.00419296 2.03377e+07 8.69041e+06 2.06299e+07 263 2.06212e+07 1.86918e+07 0.00339886 2.04358e+07 49.7742 0.0103408 0.993355 0 50.3566 GTEX-1CB4E-1726-SM-7IGMS 1 B1 2 pieces; 1 is predominantly fibromuscular stroma 6.1 Prostate Prostate 0002367 424 587 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993156 222523 0.966678 0.993965 0.787538 25015 1 76 0.00223161 208 0 8.17949e+07 0.0330292 560662 8.22916e+07 5.30616e+06 25046 4.07744e+07 0 0.17914 0.993965 0.782785 8.17949e+07 0.00277992 1.79331e+07 9.31679e+06 1.82461e+07 216 1.82072e+07 1.21704e+07 0.00250554 1.80365e+07 49.7645 0.00681311 0.994773 0 50.4327 GTEX-1CB4E-1826-SM-7RHG8 1 B1 2 pieces; minimal fibrous content 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 586 425 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992073 156257 0.975082 0.993552 0.791154 23994 1 76 0.00255148 279 0 9.50044e+07 0.0245783 418576 9.5621e+07 8.17104e+06 24029 4.73243e+07 0 0.183928 0.993552 0.786052 9.50044e+07 0.00351476 2.08467e+07 8.27979e+06 2.10858e+07 266 2.10908e+07 1.61163e+07 0.00303241 2.0977e+07 49.8647 0.00437745 0.99503 0 50.2852 GTEX-1CB4E-1926-SM-7RHFO 1 B1 2 small (1.2 mm) pieces in fibrous capsules 7.9 Nerve Nerve - Tibial 0001323 595 416 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991804 130595 0.969711 0.993831 0.77885 24434 1 76 0.00244439 296 0 9.15398e+07 0.0299177 350591 9.2108e+07 8.85127e+06 24470 4.55829e+07 0 0.19086 0.993831 0.774046 9.15398e+07 0.00351073 2.01233e+07 7.7719e+06 2.02874e+07 257 2.0327e+07 1.58709e+07 0.00297648 2.02576e+07 49.9144 0.0038063 0.995858 0 50.2031 GTEX-1CB4E-2026-SM-7PC2V 1 B1 2 pieces; severe fibrous intimal thickening; well trimmed, but with small neural bundles in adventitia 7.9 Blood Vessel Artery - Tibial 0007610 597 414 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.98979 500447 0.974125 0.992131 0.813425 24093 1 76 0.00356179 284 0 1.10082e+08 0.0254608 498702 1.10955e+08 1.89022e+07 24123 5.47073e+07 0 0.1607 0.992131 0.807024 1.10082e+08 0.00417175 2.37978e+07 1.00184e+07 2.40601e+07 286 2.41908e+07 2.10147e+07 0.00386605 2.39109e+07 49.7091 0.00449463 0.994471 0 50.274 GTEX-1CB4E-2126-SM-793AP 1 B1 2 pieces; minimal fat content 8.6 Muscle Muscle - Skeletal 0011907 602 409 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992811 465327 0.984988 0.993812 0.88595 18583 1 76 0.00201845 126 0 6.06018e+07 0.0147913 804038 6.09792e+07 5.25962e+06 18589 3.01255e+07 0 0.0990379 0.993812 0.880467 6.06018e+07 0.00270371 1.31254e+07 5.40157e+06 1.31272e+07 145 1.32354e+07 1.32035e+07 0.00236074 1.30741e+07 49.6936 0.0131855 0.994812 0 50.0033 GTEX-1CB4E-2226-SM-793DC 1 B1 6 pieces; thick (up to 4 mm) untrimmed subcutaneous layer 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 615 396 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992554 369220 0.968703 0.993988 0.788944 22982 1 76 0.00300483 177 0 6.81442e+07 0.0310271 407693 6.85564e+07 9.87507e+06 23005 3.39399e+07 0 0.179759 0.993988 0.784201 6.81442e+07 0.00387799 1.48702e+07 8.62483e+06 1.49094e+07 154 1.49434e+07 1.14485e+07 0.00344078 1.49334e+07 49.9831 0.00594683 0.995423 0 50.0658 GTEX-1CB4E-5001-SM-AN468 B1 Heart Heart - Left Ventricle 0006566 334 ChIP-Seq GTEX-1CB4F-0005-SM-A8N7L B1 7.2 Blood Whole Blood 0013756 -176 BP-54707 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.969715 923414 0.940836 0.972158 0.73373 19622 1 76 0.0105261 111 0 7.19404e+07 0.0586271 82409 7.40007e+07 1.28406e+07 19637 3.57381e+07 0 0.207106 0.972158 0.713302 7.19404e+07 0.0116019 1.56693e+07 9.89808e+07 1.59773e+07 116 1.6005e+07 1.44401e+07 0.0110627 1.58429e+07 49.7456 0.00111363 0.974602 0 50.4865 GTEX-1CB4F-0008-SM-EXURE B1 6.7 Skin Cells - Cultured fibroblasts EFO_0002009 474 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.993902 770140 0.983013 0.994573 0.859306 19958 1 76 0.00136813 183 0 8.3074e+07 0.0166767 154808 8.35273e+07 1.83844e+06 19975 4.13899e+07 0 0.123707 0.994573 0.854642 8.3074e+07 0.00177248 1.87506e+07 7.11376e+06 1.8871e+07 179 1.89481e+07 2.20469e+07 0.00157017 1.87294e+07 49.7098 0.00185338 0.995244 0 50.1599 GTEX-1CB4F-0126-SM-9JGGZ 1 B1 2 pieces; 20% of each is fat/fibrovascular tissue, cortex and small portion of medulla 7.6 Adrenal Gland Adrenal Gland 0002369 318 1064 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994631 331832 0.975939 0.995833 0.809435 24413 1 76 0.0017823 372 0 1.15954e+08 0.0237905 2.13301e+06 1.1644e+08 5.5311e+06 24460 5.78137e+07 0 0.166504 0.995833 0.806062 1.15954e+08 0.00273147 2.56178e+07 1.26692e+07 2.58603e+07 342 2.58356e+07 1.71732e+07 0.00225631 2.57592e+07 49.926 0.0183186 0.997035 0 50.2355 GTEX-1CB4F-0226-SM-7EPHS 1 B1 2 pieces 6.9 Spleen Spleen 0002106 320 1062 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989232 200455 0.970282 0.991408 0.800224 24891 1 76 0.00358987 158 0 1.0455e+08 0.0274946 618301 1.05456e+08 1.36471e+07 24933 5.19846e+07 0 0.170058 0.991408 0.793349 1.0455e+08 0.0119913 2.32545e+07 2.48332e+07 2.35708e+07 176 2.36275e+07 1.77151e+07 0.00778136 2.34124e+07 49.7713 0.00586314 0.993585 0 50.3378 GTEX-1CB4F-0326-SM-9MQKD 0 B1 2 pieces; 1 piece includes ~10% internal fat, fat in 2nd is trivial 8.1 Muscle Muscle - Skeletal 0011907 472 910 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987521 221360 0.98323 0.989443 0.874296 19771 1 76 0.00527751 127 0 6.4305e+07 0.0165463 926842 6.4991e+07 7.51024e+06 19778 3.20254e+07 0 0.108934 0.989443 0.865066 6.4305e+07 0.00653101 1.38003e+07 7.92023e+06 1.42059e+07 148 1.41646e+07 1.13681e+07 0.00590304 1.39432e+07 49.6061 0.0142611 0.991366 0 50.7241 GTEX-1CB4F-0426-SM-9KNV4 1 B1 6 pieces; well trimmed, small portion periadnexal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 476 906 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992332 200684 0.96995 0.993338 0.762698 24381 1 76 0.00260537 231 0 8.52343e+07 0.0298316 555948 8.58059e+07 1.05956e+07 24423 4.24934e+07 0 0.207252 0.993338 0.757617 8.52343e+07 0.00303624 1.85898e+07 1.11292e+07 1.88006e+07 233 1.87925e+07 1.29279e+07 0.00282059 1.86776e+07 49.8467 0.00647913 0.994344 0 50.282 GTEX-1CB4F-0526-SM-9KNW2 1 B1 2 pieces; from 10-30% is fibrous tissue/tendon, hair follicles/sweat glands, vessels 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 477 905 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992947 180557 0.974828 0.994127 0.772849 24440 1 76 0.00244426 213 0 9.0202e+07 0.0248352 295289 9.07348e+07 1.00158e+07 24479 4.49549e+07 0 0.201978 0.994127 0.768311 9.0202e+07 0.00334257 1.98146e+07 8.3001e+06 1.99993e+07 244 2.00057e+07 1.53308e+07 0.00289288 1.99086e+07 49.8784 0.00325442 0.995307 0 50.232 GTEX-1CB4F-0626-SM-9MQLI 1 B1 2 pieces; 1 piece is ~50% fat/fibrovascular tissue, 2nd is 10% fat 7.1 Nerve Nerve - Tibial 0001323 479 903 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985546 189947 0.966508 0.98779 0.75873 24320 1 76 0.00562027 148 0 7.24249e+07 0.0331985 256048 7.33202e+07 8.81897e+06 24346 3.60407e+07 0 0.207778 0.98779 0.749466 7.24249e+07 0.00728795 1.5856e+07 6.70227e+06 1.60111e+07 146 1.60307e+07 1.14214e+07 0.00645222 1.5989e+07 49.9349 0.00349219 0.990035 0 50.2432 GTEX-1CB4F-0726-SM-793AO 1 B1 2 pieces; well trimmed, no lesions 8.8 Blood Vessel Artery - Tibial 0007610 483 899 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993175 255635 0.977387 0.993919 0.853454 20646 1 76 0.00202355 138 0 6.0419e+07 0.0221301 242045 6.07887e+07 4.93292e+06 20660 3.00463e+07 0 0.123933 0.993919 0.848264 6.0419e+07 0.00262251 1.29671e+07 4.18984e+06 1.29568e+07 144 1.30181e+07 1.30654e+07 0.0023228 1.29506e+07 49.87 0.00398175 0.994663 0 49.9801 GTEX-1CB4F-0826-SM-793CV 1 B1 2 pieces 7.7 Thyroid Thyroid 0002046 484 898 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993953 318091 0.966011 0.995117 0.758987 24036 1 76 0.00285299 128 0 6.74078e+07 0.0337003 153513 6.77386e+07 9.53938e+06 24072 3.35859e+07 0 0.207024 0.995117 0.755281 6.74078e+07 0.00336219 1.48046e+07 6.57616e+06 1.47798e+07 142 1.48287e+07 1.16036e+07 0.00310729 1.48298e+07 50.0018 0.00226625 0.99628 0 49.958 GTEX-1CB4F-0826-SM-DK2JX 1 B1 2 pieces Thyroid Thyroid 0002046 484 898 BP-55970 DNA Extraction from Paxgene-derived Lysate Plate Based 08/15/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1CB4F-0826-SM-DLL3M 1 B1 2 pieces Thyroid Thyroid 0002046 484 898 BP-55970 DNA Extraction from Paxgene-derived Lysate Plate Based 08/15/2014 LCSET-10443 01/28/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1CB4F-0926-SM-7DHMJ 1 B1 2 pieces 8.2 Lung Lung 0008952 486 896 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990512 171718 0.973437 0.991669 0.772298 25917 1 76 0.00358837 206 0 9.21047e+07 0.0261945 191697 9.28785e+07 7.19498e+06 25957 4.58279e+07 0 0.201138 0.991669 0.765864 9.21047e+07 0.00528237 2.04098e+07 7.96128e+06 2.05933e+07 206 2.06537e+07 1.66653e+07 0.00443438 2.04508e+07 49.7532 0.00206395 0.992826 0 50.2238 GTEX-1CB4F-1026-SM-7DUH1 1 B1 6 pieces; well trimmed 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 489 893 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991251 434512 0.962674 0.991978 0.71249 24374 1 76 0.0026626 183 0 8.70548e+07 0.0371505 999172 8.77587e+07 7.83998e+06 24416 4.33487e+07 0 0.250184 0.991978 0.706774 8.70548e+07 0.004073 1.90854e+07 1.49271e+07 1.9207e+07 193 1.92531e+07 1.21096e+07 0.00336728 1.91124e+07 49.8166 0.0113854 0.992705 0 50.1587 GTEX-1CB4F-1126-SM-79OLG 1 B1 2 pieces; mature adipose tissue with small portion of fibrous tissue/small vessels 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 490 892 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.976287 189962 0.972837 0.980326 0.782989 23185 1 76 0.00499154 122 0 5.95049e+07 0.0269292 675894 6.06991e+07 1.3923e+07 23206 2.95996e+07 0 0.189848 0.980326 0.767585 5.95049e+07 0.00635354 1.30494e+07 7.19156e+06 1.31854e+07 137 1.32644e+07 8.45644e+06 0.00566973 1.31916e+07 49.8623 0.0111352 0.984365 0 50.2593 GTEX-1CB4F-1226-SM-7DHKU 1 B1 2 pieces; 1 piece includes ~20% external fat, mild fibrosis, islets well visualized, PanIN-1A, mild periductal chronic inflammation 8 Pancreas Pancreas 0001150 492 890 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992297 138699 0.979472 0.993653 0.844665 22222 1 76 0.00345211 98 0 7.8917e+07 0.0203176 106164 7.94211e+07 5.61602e+06 22242 3.93159e+07 0 0.134807 0.993653 0.839303 7.8917e+07 0.00517684 1.81041e+07 1.77656e+07 1.83857e+07 116 1.83512e+07 2.42092e+07 0.0043133 1.82416e+07 49.8502 0.00133672 0.995008 0 50.386 GTEX-1CB4F-1326-SM-793CW 1 B1 6 pieces; target muscularis, some residual attached fat/large vessels 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 501 881 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993127 320339 0.967796 0.994496 0.780615 22640 1 76 0.00289018 136 0 6.48419e+07 0.0319504 341705 6.52007e+07 8.92369e+06 22666 3.22892e+07 0 0.187181 0.994496 0.776318 6.48419e+07 0.00357405 1.39359e+07 5.51089e+06 1.39575e+07 145 1.39717e+07 1.08533e+07 0.00323165 1.40087e+07 50.0662 0.00524081 0.995865 0 50.0387 GTEX-1CB4F-1426-SM-793DA 1 B1 6 pieces; target muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 503 879 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993592 334936 0.968813 0.994772 0.777552 23487 1 76 0.00291172 143 0 7.44885e+07 0.0309402 362635 7.488e+07 1.07191e+07 23516 3.71112e+07 0 0.191261 0.994772 0.773487 7.44885e+07 0.00341843 1.60167e+07 6.77104e+06 1.61028e+07 162 1.61243e+07 1.24328e+07 0.00316478 1.60775e+07 49.9274 0.00484288 0.995952 0 50.134 GTEX-1CB4F-1526-SM-7MKFM 0 B1 6 pieces; few pieces include small portion of muscularis propria (not target) 7.4 Esophagus Esophagus - Mucosa 0006920 506 876 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98695 248083 0.972515 0.990777 0.787419 23184 1 76 0.00408955 124 0 6.60113e+07 0.0271052 149969 6.66258e+07 8.94843e+06 23203 3.27605e+07 0 0.185096 0.990777 0.780156 6.60113e+07 0.00454449 1.46391e+07 8.81397e+06 1.49053e+07 134 1.50223e+07 1.26499e+07 0.00431614 1.47702e+07 49.577 0.00225091 0.994604 0 50.4505 GTEX-1CB4F-1726-SM-7MGXH 1 B1 2 pieces; congested 6.6 Liver Liver 0001114 510 872 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991654 258144 0.975544 0.994246 0.861043 20085 1 76 0.00257386 112 0 5.71404e+07 0.0241654 276057 5.74711e+07 4.37896e+06 20096 2.84422e+07 0 0.114501 0.994246 0.856088 5.71404e+07 0.00356577 1.22299e+07 9.63593e+06 1.23454e+07 125 1.23891e+07 1.27943e+07 0.00306852 1.2326e+07 49.8724 0.0048034 0.996838 0 50.235 GTEX-1CB4F-1826-SM-7MGXI 1 B1 6 pieces; good lymphoid component 5.9 Small Intestine Small Intestine - Terminal Ileum 0001211 512 870 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990118 125150 0.962975 0.99275 0.764465 23440 1 76 0.00269827 104 0 4.46796e+07 0.0367009 314293 4.50059e+07 3.4261e+06 23461 2.22256e+07 0 0.19851 0.99275 0.758923 4.46796e+07 0.00370517 9.80581e+06 5.31839e+06 9.84863e+06 109 9.88906e+06 6.44188e+06 0.00320038 9.87529e+06 49.9652 0.00698337 0.995382 0 50.1089 GTEX-1CB4F-1926-SM-7MKFN 1 B1 6 pieces; target muscularis, well trimmed with minimal attached fat 5.9 Colon Colon - Sigmoid 0001159 518 864 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.978858 306421 0.971928 0.986586 0.831381 22986 1 76 0.00393402 159 0 7.71212e+07 0.0278641 382041 7.81698e+07 1.18913e+07 23001 3.81051e+07 0 0.140547 0.986586 0.820228 7.71212e+07 0.00555664 1.62776e+07 7.30691e+06 1.65897e+07 174 1.6802e+07 1.31578e+07 0.00473898 1.66161e+07 49.7219 0.00488732 0.994313 0 50.4748 GTEX-1CB4F-2026-SM-79OLU 2 B1 6 pieces; variably autolyzed mucosa with some melanosis coli/pigmented macrophages, muscularis also present 7.1 Colon Colon - Transverse 0001157 525 857 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.974936 162299 0.97169 0.978931 0.802675 22680 1 76 0.00500821 123 0 5.68451e+07 0.0280839 328690 5.80686e+07 1.39208e+07 22695 2.82682e+07 0 0.169016 0.978931 0.785763 5.68451e+07 0.00624693 1.22998e+07 5.38539e+06 1.23827e+07 129 1.2429e+07 8.97677e+06 0.00562504 1.24674e+07 50.0771 0.00566038 0.982927 0 50.168 GTEX-1CB4F-2126-SM-7MXUL 1 B1 2 pieces; spermatogenesis is present 6.9 Testis Testis 0000473 526 856 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.97476 223356 0.921337 0.98478 0.712055 33557 1 76 0.0029786 178 0 8.74601e+07 0.0783038 404111 8.88118e+07 1.47236e+07 33619 4.32032e+07 0 0.209282 0.98478 0.701217 8.74601e+07 0.00399779 1.7759e+07 1.27142e+07 1.77807e+07 178 1.81652e+07 1.46524e+07 0.00348301 1.81364e+07 49.9603 0.00455019 0.994799 0 50.0306 GTEX-1CB4F-2326-SM-7MKFO 1 B1 2 pieces; fibromuscular stroma and glands with partially sloughed lining, several corpora amylacea 6.8 Prostate Prostate 0002367 527 855 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981186 305851 0.958685 0.987859 0.752657 27254 1 76 0.00418635 164 0 8.78639e+07 0.0410485 471737 8.89438e+07 1.35664e+07 27303 4.34797e+07 0 0.206028 0.987859 0.743519 8.78639e+07 0.00517068 1.87877e+07 9.965e+06 1.91444e+07 196 1.93923e+07 1.32559e+07 0.00467519 1.90927e+07 49.6106 0.00530377 0.994532 0 50.4701 GTEX-1CB4G-0002-SM-DINCF C1 Blood Whole Blood 0013756 350 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1CB4G-0002-SM-DLIOL C1 Blood Whole Blood 0013756 350 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1CB4G-0006-SM-AHZ22 C1 8.7 Blood Whole Blood 0013756 350 BP-54707 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.965319 529666 0.978362 0.966995 0.797038 20563 1 76 0.0069825 134 0 1.08571e+08 0.0199791 481521 1.12277e+08 1.87039e+07 20576 5.39456e+07 0 0.181325 0.966995 0.770731 1.08571e+08 0.00955724 2.49304e+07 1.20693e+08 2.51172e+07 162 2.51177e+07 2.53528e+07 0.00826764 2.51224e+07 50.0047 0.0042887 0.968671 0 50.1867 GTEX-1CB4G-0008-SM-EXURF C1 6.8 Skin Cells - Cultured fibroblasts EFO_0002009 470 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.993235 879947 0.975096 0.994129 0.848213 20020 1 76 0.00142986 176 0 8.06593e+07 0.0245881 161968 8.11357e+07 2.03171e+06 20034 4.017e+07 0 0.126884 0.994129 0.843233 8.06593e+07 0.00193788 1.8006e+07 1.28905e+07 1.82102e+07 169 1.82993e+07 2.06455e+07 0.00168364 1.79907e+07 49.5748 0.00199626 0.995022 0 50.2819 GTEX-1CB4G-0011-R10a-SM-9QEHS C1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 365 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991116 574255 0.964428 0.993931 0.853979 24315 1 76 0.00190152 274 0 1.11142e+08 0.0351753 3.80208e+06 1.1182e+08 5.32724e+06 24341 5.53036e+07 0 0.110449 0.993931 0.848797 1.11142e+08 0.00388584 2.43397e+07 1.53793e+07 2.44382e+07 320 2.45035e+07 1.37968e+07 0.00289087 2.45421e+07 50.0394 0.0340018 0.996747 0 50.101 GTEX-1CB4G-0011-R11a-SM-9OSWG C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 365 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99013 518442 0.951857 0.992723 0.785508 24320 1 76 0.00265382 272 0 1.0891e+08 0.0477366 1.55350e+06 1.09708e+08 1.02067e+07 24351 5.41693e+07 0 0.166349 0.992723 0.779792 1.0891e+08 0.0038693 2.35125e+07 1.4215e+07 2.36762e+07 303 2.37843e+07 1.40182e+07 0.00325998 2.36637e+07 49.8729 0.0141604 0.995316 0 50.1734 GTEX-1CB4G-0011-R1b-SM-9QEHT C1, A1 6.5 Brain Brain - Hippocampus 0001954 365 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990024 413823 0.96375 0.993264 0.854793 23116 1 76 0.00203479 272 0 8.4746e+07 0.0359901 4.62833e+06 8.53208e+07 4.25673e+06 23138 4.21585e+07 0 0.108957 0.993264 0.849035 8.4746e+07 0.00415162 1.85808e+07 1.56644e+07 1.87798e+07 305 1.88198e+07 8.55419e+06 0.00308975 1.87778e+07 49.9441 0.0542462 0.996504 0 50.2664 GTEX-1CB4G-0011-R2a-SM-9QEGQ C1, A1 6.4 Brain Brain - Substantia nigra 0002038 365 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990364 325801 0.967156 0.99361 0.854809 23532 1 76 0.00207367 274 0 8.73518e+07 0.0325981 5.93566e+06 8.79136e+07 4.36226e+06 23549 4.34561e+07 0 0.112347 0.99361 0.849346 8.73518e+07 0.00405305 1.92228e+07 1.38432e+07 1.95402e+07 315 1.95103e+07 9.38112e+06 0.00306013 1.94957e+07 49.9813 0.0675169 0.996855 0 50.4094 GTEX-1CB4G-0011-R3a-SM-CE6QQ C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990566 443972 0.968765 0.991821 0.851072 23234 1 76 0.00789076 199 0 8.13617e+07 0.0309622 6.24619e+06 8.20327e+07 1.23317e+07 23246 4.0488e+07 0 0.117693 0.991821 0.844111 8.13617e+07 0.00742633 1.77739e+07 1.79488e+07 1.81314e+07 228 1.80895e+07 7.50083e+06 0.00765884 1.78825e+07 49.7123 0.0761427 0.993076 0 50.4979 GTEX-1CB4G-0011-R4b-SM-CJI28 C1, A1 6.6 Brain Brain - Amygdala 0001876 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992321 935678 0.959935 0.994015 0.853577 21569 1 76 0.00229236 371 0 8.35191e+07 0.0398554 8.0938e+06 8.40219e+07 5.05454e+06 21581 4.15598e+07 0 0.106357 0.994015 0.848469 8.35191e+07 0.00304346 1.78951e+07 3.1627e+07 1.85992e+07 356 1.84976e+07 6.99775e+06 0.00266727 1.81243e+07 49.4904 0.0963296 0.995709 0 50.9648 GTEX-1CB4G-0011-R5a-SM-CKZNM C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991801 892857 0.954329 0.994035 0.816214 25254 1 76 0.00224185 269 0 9.48876e+07 0.0453537 4.57821e+06 9.54569e+07 9.2968e+06 25283 4.72383e+07 0 0.138115 0.994035 0.811346 9.48876e+07 0.00349064 2.04664e+07 2.63571e+07 2.08419e+07 326 2.08923e+07 1.04771e+07 0.00286485 2.0607e+07 49.6563 0.047961 0.99627 0 50.4545 GTEX-1CB4G-0011-R6b-SM-9QEGO C1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 365 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.99075 392799 0.962832 0.993575 0.833769 24276 1 76 0.00204446 269 0 9.89334e+07 0.0368971 6.03946e+06 9.95732e+07 4.75962e+06 24294 4.92266e+07 0 0.129064 0.993575 0.828411 9.89334e+07 0.00409529 2.15322e+07 1.84182e+07 2.1787e+07 315 2.17663e+07 9.82255e+06 0.00306696 2.17788e+07 50.0144 0.0606535 0.9964 0 50.294 GTEX-1CB4G-0011-R7b-SM-9QEGP C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 365 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991084 545664 0.963197 0.994002 0.83718 23859 1 76 0.00202625 269 0 1.01143e+08 0.036548 6.715e+06 1.01754e+08 4.74488e+06 23873 5.03349e+07 0 0.126017 0.994002 0.832158 1.01143e+08 0.00411067 2.19699e+07 2.73277e+07 2.22628e+07 317 2.22438e+07 9.8456e+06 0.0030654 2.22307e+07 49.9853 0.0659928 0.996919 0 50.3312 GTEX-1CB4G-0011-R8b-SM-9WG7H C1, A1 6.4 Brain Brain - Hypothalamus 0001898 365 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992407 229151 0.970088 0.99486 0.847238 23424 1 76 0.00268524 271 0 9.37382e+07 0.0297167 8.74571e+06 9.42225e+07 6.41092e+06 23444 4.66789e+07 0 0.12285 0.99486 0.842883 9.37382e+07 0.00379177 2.06319e+07 1.97266e+07 2.08379e+07 318 2.06903e+07 7.0987e+06 0.00323714 2.09603e+07 50.3242 0.0928198 0.997313 0 50.2484 GTEX-1CB4G-0226-SM-7PC3O 0 C1 6 pieces, no dermal fat, squamous epithelium is 25-50 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 469 784 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.990469 395034 0.974547 0.992671 0.818928 24790 1 76 0.00317334 314 0 1.02998e+08 0.0251092 618354 1.03758e+08 1.44075e+07 24817 5.12237e+07 0 0.155619 0.992671 0.812926 1.02998e+08 0.00455476 2.23275e+07 1.27265e+07 2.24663e+07 286 2.26028e+07 1.97833e+07 0.00386251 2.24051e+07 49.7804 0.00595957 0.994872 0 50.1549 GTEX-1CB4G-0326-SM-7SB8R 0 C1 2 pieces, ~10% fascia, rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 472 782 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990223 372483 0.960695 0.992402 0.665638 25908 1 76 0.00296858 173 0 9.64853e+07 0.03896 433264 9.7224e+07 1.08608e+07 25971 4.80021e+07 0 0.295057 0.992402 0.66058 9.64853e+07 0.00422611 2.09801e+07 1.54573e+07 2.12467e+07 192 2.13012e+07 1.31384e+07 0.00359596 2.11279e+07 49.7957 0.00445635 0.994581 0 50.3156 GTEX-1CB4G-0426-SM-7MXUN 0 C1 2 pieces, ~5-10% adherent / interstitial fat, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 473 782 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978846 141802 0.985101 0.988203 0.886422 19501 1 76 0.00278687 199 0 8.02996e+07 0.014637 1.07046e+06 8.12582e+07 1.2716e+07 19507 3.97158e+07 0 0.0986784 0.988203 0.875965 8.02996e+07 0.00395713 1.72305e+07 1.20642e+07 1.72516e+07 214 1.75277e+07 1.6915e+07 0.00336646 1.76315e+07 50.1476 0.0131736 0.997561 0 50.0306 GTEX-1CB4G-0526-SM-7P8SY 0 C1 2 pieces, no significant adherant fat 7.9 Blood Vessel Artery - Tibial 0007610 475 781 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.942065 311714 0.974321 0.968674 0.847591 23236 1 76 0.0042176 213 0 9.01754e+07 0.0252404 485641 9.30916e+07 1.44991e+07 23255 4.37169e+07 0 0.12673 0.968674 0.821039 9.01754e+07 0.00800731 1.85866e+07 8.62698e+06 1.87831e+07 206 1.99246e+07 1.79027e+07 0.00606041 1.97006e+07 49.7174 0.00521681 0.995283 0 50.2629 GTEX-1CB4G-0626-SM-7PC3P 0 C1 2 pieces, minimal adherant fat. 6.4 Nerve Nerve - Tibial 0001323 476 781 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987594 416785 0.962898 0.990307 0.713319 25401 1 76 0.00365755 179 0 9.05356e+07 0.0368262 444178 9.14218e+07 1.44066e+07 25457 4.4968e+07 0 0.249579 0.990307 0.706405 9.05356e+07 0.00474112 1.97336e+07 9.08173e+06 1.99789e+07 187 2.01228e+07 1.28953e+07 0.00419785 1.98239e+07 49.6259 0.00485856 0.99302 0 50.3088 GTEX-1CB4G-0726-SM-79OOJ 1 C1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 491 768 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993459 135915 0.975961 0.993752 0.779495 21786 1 76 0.00326867 121 0 6.17727e+07 0.0238403 2.01138e+06 6.21611e+07 3.48596e+06 21808 3.07835e+07 0 0.196465 0.993752 0.774625 6.17727e+07 0.004495 1.3628e+07 7.19746e+06 1.38313e+07 147 1.38149e+07 7.2489e+06 0.00388165 1.36524e+07 49.7042 0.0323576 0.994045 0 50.3701 GTEX-1CB4G-0826-SM-7DUGF 1 C1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis 7.4 Heart Heart - Left Ventricle 0006566 493 767 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992041 223411 0.976247 0.992543 0.836793 22446 1 76 0.00291576 264 0 9.37944e+07 0.0235571 5.90671e+06 9.44991e+07 8.4593e+06 22468 4.67468e+07 0 0.139454 0.992543 0.830553 9.37944e+07 0.004051 2.07304e+07 1.52877e+07 2.10517e+07 317 2.1075e+07 1.07473e+07 0.0034831 2.07522e+07 49.6141 0.0625055 0.993046 0 50.3845 GTEX-1CB4G-1126-SM-7PBXW 1 C1 6 pieces, minimal atherosis 6.2 Blood Vessel Artery - Aorta 0001496 503 760 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985216 111307 0.966659 0.989608 0.746709 22476 1 76 0.00321022 135 0 6.97356e+07 0.0329947 328812 7.04679e+07 9.83282e+06 22498 3.46054e+07 0 0.21995 0.989608 0.738949 6.97356e+07 0.00505562 1.48821e+07 6.88156e+06 1.50441e+07 148 1.51242e+07 1.03876e+07 0.00412882 1.50903e+07 49.9438 0.00466613 0.994 0 50.2707 GTEX-1CB4G-1326-SM-7MKFP 1 C1 6 pieces, squamous mucosa up to ~0.4mm, 40-50% thickness 7.4 Esophagus Esophagus - Mucosa 0006920 506 760 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.978963 223852 0.974336 0.9867 0.829871 21701 1 76 0.00402082 128 0 6.6174e+07 0.0253064 839826 6.7066e+07 1.01895e+07 21714 3.27181e+07 0 0.144465 0.9867 0.818833 6.6174e+07 0.00560848 1.46421e+07 8.89453e+06 1.48053e+07 149 1.5022e+07 1.09273e+07 0.00480842 1.49259e+07 49.8396 0.0125224 0.994437 0 50.2772 GTEX-1CB4G-1426-SM-7RHH1 1 C1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 506 761 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992206 170139 0.969448 0.994076 0.804067 23470 1 76 0.00266363 269 0 9.53083e+07 0.030361 1.91974e+06 9.58763e+07 8.93878e+06 23499 4.74634e+07 0 0.165382 0.994076 0.799303 9.53083e+07 0.0038721 2.05388e+07 8.50918e+06 2.08952e+07 314 2.08759e+07 1.15466e+07 0.00326673 2.07238e+07 49.8171 0.0200231 0.995946 0 50.43 GTEX-1CB4G-1526-SM-7P8QG 1 C1 2 pieces, no abnormalities 5.6 Thyroid Thyroid 0002046 510 758 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988421 413931 0.965299 0.990688 0.762556 26671 1 76 0.00358547 277 0 1.06005e+08 0.0332736 632953 1.07001e+08 1.50739e+07 26720 5.26686e+07 0 0.202743 0.990688 0.755455 1.06005e+08 0.00445043 2.31645e+07 1.63035e+07 2.35317e+07 269 2.36641e+07 1.75706e+07 0.00401696 2.32608e+07 49.5703 0.00591537 0.992955 0 50.3931 GTEX-1CB4G-1826-SM-7MKGO 2 C1 2 pieces, moderately advance saponification. Islets dimly seen, degeneratiang 5.8 Pancreas Pancreas 0001150 516 755 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980133 363559 0.972262 0.987146 0.812151 24037 1 76 0.00419747 110 0 7.76486e+07 0.0274766 668423 7.86596e+07 1.16292e+07 24060 3.83964e+07 0 0.160111 0.987146 0.801712 7.76486e+07 0.00609058 1.74003e+07 2.26401e+07 1.76519e+07 127 1.78559e+07 1.83501e+07 0.0051373 1.77388e+07 49.8355 0.00849766 0.994159 0 50.3589 GTEX-1CB4G-2126-SM-7IGQ8 1 C1 2 pieces, ~5-10% fascia, rep delineated 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 522 752 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994082 367690 0.973102 0.99446 0.790919 23208 1 76 0.00214258 162 0 7.29437e+07 0.026553 511384 7.335e+07 2.6875e+06 23231 3.6347e+07 0 0.182183 0.99446 0.786538 7.29437e+07 0.00254275 1.60256e+07 8.23694e+06 1.62359e+07 179 1.62184e+07 1.1386e+07 0.00234259 1.60739e+07 49.7763 0.00697183 0.994839 0 50.326 GTEX-1CB4G-2326-SM-79OOI 1 C1 2 pieces, mainly fibroadipose elements; trace ductal elements, rep delineated 6.7 Breast Breast - Mammary Tissue 0008367 527 750 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381,LCSET-6776 01/30/2015 TruSeq.v1 RNASEQ 0.992953 265584 0.967819 0.993427 0.740011 25060 1 76 0.00304403 173 0 8.14872e+07 0.0318445 352600 8.20264e+07 5.9341e+06 25104 4.05893e+07 0 0.227808 0.993427 0.735147 8.14872e+07 0.00396426 1.79335e+07 8.27168e+06 1.80382e+07 178 1.80703e+07 1.24505e+07 0.00350393 1.79372e+07 49.8153 0.00429862 0.993901 0 50.1456 GTEX-1CB4G-2426-SM-7DUGM 2 C1 2 pieces, spermatogenesis present, moderately advanced autolysis 7.3 Testis Testis 0000473 529 748 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.990229 662855 0.916552 0.991204 0.692758 34027 1 76 0.00294828 195 0 9.35603e+07 0.0831181 643924 9.43905e+07 8.55724e+06 34105 4.65718e+07 0 0.223794 0.991204 0.686665 9.35603e+07 0.00417679 1.92397e+07 1.40787e+07 1.93162e+07 177 1.94512e+07 1.51616e+07 0.00356193 1.91835e+07 49.6536 0.00682192 0.99218 0 50.0992 GTEX-1CB4G-2526-SM-7MXTG 2 C1 2 pieces, mainly stroma; glandular elements moderately-markedly autolyzed 5.7 Prostate Prostate 0002367 531 747 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.974266 91539 0.964431 0.984933 0.769912 23114 1 76 0.00318962 111 0 5.44689e+07 0.0353595 1.07571e+06 5.53021e+07 7.92924e+06 23135 2.68734e+07 0 0.194519 0.984933 0.758312 5.44689e+07 0.00472027 1.16787e+07 5.4739e+06 1.17386e+07 129 1.19388e+07 6.49505e+06 0.00394666 1.20139e+07 50.1567 0.0194514 0.995599 0 50.128 GTEX-1CB4G-2726-SM-79OO4 1 C1 6 pieces, confirmed target muscularis 6.7 Colon Colon - Sigmoid 0001159 535 745 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991878 139448 0.968028 0.99178 0.793756 22754 1 76 0.0032216 129 0 6.20829e+07 0.0317164 658425 6.25975e+07 4.04438e+06 22778 3.08996e+07 0 0.174272 0.99178 0.787232 6.20829e+07 0.00455509 1.33892e+07 5.04042e+06 1.34747e+07 142 1.34683e+07 9.88371e+06 0.00388841 1.33907e+07 49.8556 0.0105184 0.991682 0 50.1591 GTEX-1CB4G-2926-SM-7MKFQ 1 C1 4 pieces, fragmented, no abnormalities 7.2 Brain Brain - Cerebellum 0002037 540 742 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98483 499455 0.943041 0.989502 0.722993 24559 1 76 0.00431329 155 0 8.21015e+07 0.0565975 1.38827e+06 8.29725e+07 1.21228e+07 24590 4.07019e+07 0 0.220048 0.989502 0.715403 8.21015e+07 0.00489562 1.74861e+07 1.84461e+07 1.78497e+07 180 1.80605e+07 1.00355e+07 0.00460308 1.7631e+07 49.3983 0.0167317 0.994175 0 50.5146 GTEX-1CB4G-3126-SM-7EPHX 1 C1 1 piece, 2 ~4-5mm nodules neurohypophysis (delineated rest is adenohypophysis, minute fragmnet of dura 6.8 Pituitary Pituitary 0000007 544 740 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.988458 172225 0.967373 0.990679 0.749788 26154 1 76 0.00330188 135 0 9.20609e+07 0.0323499 1.50905e+06 9.29271e+07 1.24466e+07 26202 4.58007e+07 0 0.217584 0.990679 0.742799 9.20609e+07 0.0119125 2.0034e+07 9.51219e+06 2.02035e+07 167 2.02527e+07 1.17582e+07 0.00759754 2.01788e+07 49.9086 0.016239 0.9929 0 50.2107 GTEX-1CB4H-0004-SM-7J38K C1 Blood Whole Blood 0013756 933 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1CB4H-0004-SM-7MA5Z C1 Blood Whole Blood 0013756 933 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1CB4H-0006-SM-A96RE C1 7 Blood Whole Blood 0013756 933 BP-54707 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990051 414271 0.97077 0.991332 0.786452 17868 1 76 0.00227618 110 0 5.88678e+07 0.0286576 177666 5.93825e+07 2.08417e+06 17876 2.93067e+07 0 0.184318 0.991332 0.779635 5.88678e+07 0.00298059 1.31097e+07 4.63209e+07 1.32767e+07 119 1.32971e+07 1.20473e+07 0.00262793 1.3171e+07 49.7618 0.00299189 0.992613 0 50.3164 GTEX-1CB4H-0011-R10b-SM-9QEH3 C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 939 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990911 421112 0.965202 0.993788 0.846119 23477 1 76 0.001745 268 0 8.46354e+07 0.0344783 3.95896e+06 8.51644e+07 4.24228e+06 23496 4.21104e+07 0 0.119083 0.993788 0.840863 8.46354e+07 0.00368971 1.85732e+07 1.20239e+07 1.86959e+07 302 1.87545e+07 1.01437e+07 0.00271454 1.87202e+07 49.9543 0.046486 0.996666 0 50.1646 GTEX-1CB4H-0011-R3b-SM-9OSVI C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 939 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991844 467238 0.965897 0.994152 0.846771 24646 1 76 0.00225925 271 0 1.11722e+08 0.0338083 6.31556e+06 1.12379e+08 9.88802e+06 24668 5.56171e+07 0 0.119126 0.994152 0.841819 1.11722e+08 0.00362583 2.45339e+07 1.90197e+07 2.46907e+07 323 2.46788e+07 1.24649e+07 0.00294095 2.47683e+07 50.0906 0.0561987 0.99646 0 50.1593 GTEX-1CB4H-0011-R5b-SM-9QEGN C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 939 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.993203 429899 0.966945 0.994654 0.83579 24539 1 76 0.00308815 272 0 1.2318e+08 0.0328254 1.05965e+07 1.23842e+08 1.2582e+07 24562 6.13962e+07 0 0.131155 0.994654 0.831322 1.2318e+08 0.00340801 2.52716e+07 2.96001e+07 2.87458e+07 305 2.84291e+07 1.18878e+07 0.00324785 2.56414e+07 47.4222 0.0855647 0.996106 0 53.2158 GTEX-1CB4H-0011-R6b-SM-CKZNK C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 939 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992918 447471 0.968634 0.995074 0.860055 20685 1 76 0.00171335 264 0 6.96064e+07 0.0312441 1.00934e+07 6.9951e+07 6.67085e+06 20695 3.46751e+07 0 0.108579 0.995074 0.855818 6.96064e+07 0.0028993 1.5148e+07 2.29172e+07 1.57334e+07 314 1.56021e+07 4.68714e+06 0.00230504 1.53884e+07 49.6552 0.144293 0.99723 0 50.9479 GTEX-1CB4H-0011-R7b-SM-CJI27 C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 939 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991971 1.26453e+06 0.962423 0.993715 0.832333 21726 1 76 0.00167991 369 0 9.60002e+07 0.0373928 8.71468e+06 9.66074e+07 5.42321e+06 21733 4.77766e+07 0 0.13009 0.993715 0.827102 9.60002e+07 0.00237344 2.04984e+07 4.59378e+07 2.12237e+07 387 2.11038e+07 8.15561e+06 0.00202606 2.07609e+07 49.5905 0.0902071 0.995459 0 50.8692 GTEX-1CB4H-0011-R8b-SM-CJI26 C1, A1 6.4 Brain Brain - Hypothalamus 0001898 939 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992063 542169 0.974175 0.993835 0.850644 22139 1 76 0.00181414 369 0 8.47895e+07 0.0256828 1.06134e+07 8.53154e+07 5.40638e+06 22150 4.21909e+07 0 0.123532 0.993835 0.8454 8.47895e+07 0.00242429 1.83076e+07 2.73735e+07 1.92344e+07 388 1.9112e+07 6.28254e+06 0.00211867 1.85377e+07 49.2373 0.124402 0.995607 0 51.2343 GTEX-1CB4H-0011-R9a-SM-CKZNL C1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 939 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992564 533538 0.965542 0.994663 0.864554 21134 1 76 0.00177651 382 0 8.76193e+07 0.0342259 9.71116e+06 8.80895e+07 8.05894e+06 21146 4.36387e+07 0 0.100988 0.994663 0.859939 8.76193e+07 0.00304541 1.93269e+07 2.05135e+07 2.00226e+07 352 1.98162e+07 8.25064e+06 0.00240962 1.9691e+07 49.8415 0.110242 0.996762 0 50.884 GTEX-1CB4H-0126-SM-7IGN2 2 C1 2 pieces; 5% fibrous content 6.1 Thyroid Thyroid 0002046 947 656 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99334 523751 0.964606 0.994136 0.767326 25414 1 76 0.00212858 379 0 1.28983e+08 0.0350794 567654 1.29744e+08 8.11966e+06 25462 6.42436e+07 0 0.19728 0.994136 0.762826 1.28983e+08 0.00286955 2.81472e+07 1.30495e+07 2.83777e+07 355 2.83658e+07 2.18926e+07 0.00249877 2.82671e+07 49.9128 0.00437519 0.994932 0 50.2039 GTEX-1CB4H-0226-SM-7PBXM 1 C1 6 pieces; well trimmed; minimal dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 949 656 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761,LCSET-7211,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.987636 135810 0.973126 0.989125 0.788444 23171 1 76 0.00192084 234 0 7.99575e+07 0.026661 345828 8.08366e+07 4.18982e+06 23195 3.985e+07 0 0.184682 0.989125 0.77987 7.99575e+07 0.00266867 1.74094e+07 7.99162e+06 1.75581e+07 208 1.75646e+07 1.36366e+07 0.0022942 1.75132e+07 49.9267 0.00427811 0.990614 0 50.2127 GTEX-1CB4H-0326-SM-9WG5G 0 C1 2 pieces; 10% fibrous content in 1 piece 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 951 655 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991495 210210 0.975527 0.993716 0.769031 23543 1 76 0.00256562 278 0 9.72072e+07 0.0241865 1.50421e+06 9.78219e+07 7.51069e+06 23584 4.83825e+07 0 0.206496 0.993716 0.764199 9.72072e+07 0.0035424 2.14468e+07 1.00476e+07 2.17055e+07 272 2.17384e+07 1.47242e+07 0.00305292 2.16167e+07 49.8596 0.015377 0.995937 0 50.2997 GTEX-1CB4H-0426-SM-7MXTL 1 C1 2 pieces; atrophy & 20% internal fat 7.3 Muscle Muscle - Skeletal 0011907 953 654 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976126 88298 0.976229 0.986241 0.82138 21147 1 76 0.00273552 139 0 6.24564e+07 0.02358 1.6615e+06 6.33278e+07 9.48472e+06 21164 3.08564e+07 0 0.154849 0.986241 0.810078 6.24564e+07 0.00389921 1.3623e+07 8.3003e+06 1.36379e+07 150 1.39035e+07 1.01262e+07 0.0033114 1.39263e+07 50.041 0.0262365 0.996355 0 50.0273 GTEX-1CB4H-0626-SM-7IGN3 1 C1 2 pieces; 30% fibrofatty content 6.1 Heart Heart - Atrial Appendage 0006631 959 649 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993301 172139 0.978024 0.994508 0.795729 20833 1 76 0.00190605 124 0 5.70574e+07 0.0218207 1.94586e+06 5.73724e+07 3.57653e+06 20846 2.84354e+07 0 0.182294 0.994508 0.79136 5.70574e+07 0.00293856 1.24255e+07 7.0917e+06 1.26092e+07 154 1.25883e+07 6.45624e+06 0.00242167 1.2506e+07 49.8361 0.0339162 0.995715 0 50.367 GTEX-1CB4H-0826-SM-7SB7Z 1 C1 2 pieces; minimal plaque; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 963 647 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989961 218094 0.969866 0.992759 0.770816 21492 1 76 0.00260275 135 0 6.80657e+07 0.0297236 400086 6.85621e+07 7.53892e+06 21518 3.38346e+07 0 0.19905 0.992759 0.765235 6.80657e+07 0.0043517 1.45839e+07 6.38496e+06 1.47074e+07 146 1.47301e+07 1.21165e+07 0.00347476 1.47412e+07 50.019 0.00583538 0.995557 0 50.2108 GTEX-1CB4H-0926-SM-7PBYZ 1 C1 2 pieces; foci of external fat up to 0.3 mm thick 6 Nerve Nerve - Tibial 0001323 966 645 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985611 179958 0.963676 0.989939 0.717817 24960 1 76 0.00300966 223 0 9.83724e+07 0.0361033 1.08783e+06 9.93721e+07 1.35595e+07 25014 4.88372e+07 0 0.245859 0.989939 0.710596 9.83724e+07 0.00526518 2.1438e+07 1.10368e+07 2.16312e+07 253 2.17085e+07 1.19349e+07 0.00413249 2.17601e+07 50.0594 0.010947 0.994268 0 50.2243 GTEX-1CB4H-1126-SM-7MKGL 1 C1 6 pieces; hair-free; 10% deep dermal fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 970 643 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986866 203511 0.974123 0.990667 0.775924 22322 1 76 0.00389553 124 0 5.35411e+07 0.0256601 284672 5.40456e+07 7.41902e+06 22348 2.6575e+07 0 0.198198 0.990667 0.768683 5.35411e+07 0.00476164 1.16093e+07 5.75614e+06 1.18225e+07 114 1.1921e+07 9.04008e+06 0.00432692 1.17057e+07 49.5444 0.00526726 0.994468 0 50.455 GTEX-1CB4H-1526-SM-7MXU4 1 C1 6 pieces; well dissected; no submucosa 6.8 Esophagus Esophagus - Mucosa 0006920 977 641 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.974086 324797 0.969848 0.985112 0.781964 25305 1 76 0.00302299 377 0 1.65577e+08 0.0298224 2.00605e+06 1.6808e+08 2.7894e+07 25348 8.17122e+07 0 0.187884 0.985112 0.770322 1.65577e+08 0.00437084 3.6551e+07 2.66257e+07 3.67932e+07 350 3.75198e+07 2.193e+07 0.00368937 3.75683e+07 50.0323 0.0119351 0.996138 0 50.1651 GTEX-1CB4H-2426-SM-7PBYR 2 C1 6 pieces; glands in varying states of autolysis 5.6 Stomach Stomach 0000945 995 633 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986001 241738 0.966678 0.989937 0.760344 25187 1 76 0.003109 376 0 1.13576e+08 0.0330925 1.86693e+06 1.14731e+08 1.64858e+07 25236 5.63992e+07 0 0.206334 0.989937 0.752692 1.13576e+08 0.00493074 2.45166e+07 1.26923e+07 2.4837e+07 343 2.49225e+07 1.53478e+07 0.00401625 2.48527e+07 49.93 0.0162723 0.993872 0 50.3247 GTEX-1CB4H-2726-SM-7EWFF 2 C1 2 pieces; glands in a portion of 1 piece are autolyzed and resemble cervical canal, not endometrium [labeled]; adjacent endometrial glands and those in the other piece are autolyzed; stroma intact 6.4 Uterus Uterus 0000995 1000 630 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.988411 121181 0.965505 0.990278 0.712806 22636 1 76 0.0026453 123 0 5.54315e+07 0.0342191 342615 5.59757e+07 4.9523e+06 22676 2.75438e+07 0 0.252699 0.990278 0.705876 5.54315e+07 0.00385075 1.21541e+07 6.854e+06 1.21887e+07 122 1.22148e+07 8.35707e+06 0.00324689 1.2229e+07 50.029 0.00612078 0.992144 0 50.071 GTEX-1CB4H-3026-SM-79OLX 2 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 1016 618 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.979169 306950 0.941874 0.982763 0.7121 23544 1 76 0.00491993 123 0 6.70478e+07 0.057863 1.73043e+06 6.82237e+07 1.47438e+07 23571 3.33446e+07 0 0.229774 0.982763 0.699826 6.70478e+07 0.00600871 1.43565e+07 1.36629e+07 1.44696e+07 145 1.45365e+07 6.66626e+06 0.00546233 1.45078e+07 49.9505 0.025364 0.986356 0 50.1962 GTEX-1CB4H-3126-SM-7IGN4 2 C1 4 pieces; focus of adherent meninges 6.2 Brain Brain - Cortex 0001870 1018 622 BP-55957 RNA Extraction from Paxgene-derived Lysate Plate Based 08/14/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994695 570951 0.959919 0.995763 0.835401 23206 1 76 0.00188764 267 0 8.12066e+07 0.0397675 4.34238e+06 8.15522e+07 5.15209e+06 23222 4.04686e+07 0 0.124519 0.995763 0.831861 8.12066e+07 0.0025229 1.75481e+07 2.33586e+07 1.81305e+07 299 1.80125e+07 9.4966e+06 0.00220493 1.77379e+07 49.616 0.0532466 0.99683 0 50.8163 GTEX-1CB4H-3226-SM-7MXUC 1 C1 1 piece; mostly adenohypophysis; neural portion marked 6.5 Pituitary Pituitary 0000007 1020 620 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977023 119496 0.96134 0.986282 0.740056 24039 1 76 0.0030375 101 0 5.34578e+07 0.0384422 814088 5.42014e+07 8.98746e+06 24062 2.64246e+07 0 0.221284 0.986282 0.729903 5.34578e+07 0.00418853 1.14772e+07 6.14541e+06 1.152e+07 116 1.17105e+07 7.1816e+06 0.00360761 1.1744e+07 50.0715 0.0150197 0.99554 0 50.0932 GTEX-1CB4I-0002-SM-DINB1 B1 Blood Whole Blood 0013756 -191 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1CB4I-0002-SM-DLIOJ B1 Blood Whole Blood 0013756 -191 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1CB4I-0006-SM-A96RF B1 7.8 Blood Whole Blood 0013756 -191 BP-54707 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.985355 847096 0.942174 0.986957 0.793094 17804 1 76 0.00226938 116 0 5.99762e+07 0.0573796 345771 6.07688e+07 1.94074e+06 17810 2.98667e+07 0 0.14908 0.986957 0.782749 5.99762e+07 0.00313642 1.30326e+07 4.85871e+07 1.32038e+07 120 1.32581e+07 1.25678e+07 0.00270219 1.3092e+07 49.6849 0.00568994 0.988559 0 50.3262 GTEX-1CB4I-0008-SM-EXURG B1 7.1 Skin Cells - Cultured fibroblasts EFO_0002009 514 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99427 694606 0.982508 0.994889 0.860603 19590 1 76 0.00139228 187 0 8.74623e+07 0.0171727 124761 8.79116e+07 2.20226e+06 19608 4.3588e+07 0 0.121904 0.994889 0.856205 8.74623e+07 0.00183358 1.96819e+07 7.99434e+06 1.98184e+07 196 1.98816e+07 2.28458e+07 0.00161279 1.96732e+07 49.7365 0.00141916 0.995508 0 50.1728 GTEX-1CB4I-0126-SM-7RHGG 1 B1 6 pieces; well dissected; <5% dermal fat 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 472 1325 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991031 225560 0.967548 0.993386 0.766946 24944 1 76 0.00254222 216 0 9.12196e+07 0.0322778 699085 9.1827e+07 9.40663e+06 24987 4.54072e+07 0 0.200603 0.993386 0.761873 9.12196e+07 0.00385535 1.9983e+07 1.01725e+07 2.02361e+07 245 2.02311e+07 1.31787e+07 0.00319723 2.01878e+07 49.9464 0.00761307 0.995742 0 50.3147 GTEX-1CB4I-0226-SM-79OLH 1 B1 6 pieces; up to 1 mm subcutaneous fat in 2 of 6 pieces; up to 10% dermal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 518 1279 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975267 234872 0.967396 0.979481 0.773878 23014 1 76 0.00524487 166 0 6.49745e+07 0.0323722 510678 6.63357e+07 1.54029e+07 23033 3.23093e+07 0 0.193518 0.979481 0.757998 6.49745e+07 0.00678663 1.40124e+07 8.76585e+06 1.41508e+07 144 1.42153e+07 9.61183e+06 0.00601243 1.4201e+07 49.9748 0.00769839 0.983694 0 50.2457 GTEX-1CB4I-0326-SM-7DHMM 1 B1 2 pieces; 5% internal fat 8.1 Muscle Muscle - Skeletal 0011907 519 1278 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99192 115525 0.980492 0.993195 0.868474 19455 1 76 0.00336362 170 0 7.40428e+07 0.0192825 772824 7.45501e+07 5.73048e+06 19465 3.68809e+07 0 0.112019 0.993195 0.862564 7.40428e+07 0.00512466 1.59222e+07 6.78949e+06 1.61963e+07 173 1.62001e+07 1.45786e+07 0.00424301 1.59986e+07 49.687 0.0103665 0.994469 0 50.4267 GTEX-1CB4I-0426-SM-7IGPR 1 B1 2 pieces; <5% fibrovascular content 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 523 1274 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995506 116268 0.976861 0.995437 0.834281 21086 1 76 0.00187261 137 0 5.73485e+07 0.0227885 356121 5.76114e+07 2.71702e+06 21101 2.85722e+07 0 0.14258 0.995437 0.830474 5.73485e+07 0.00231234 1.25245e+07 4.30866e+06 1.2654e+07 146 1.26438e+07 1.03788e+07 0.00209249 1.25363e+07 49.7866 0.00618144 0.995369 0 50.2571 GTEX-1CB4I-0526-SM-7RHGC 1 B1 2 pieces; mild flat intimal thickening; 1 piece has 40% external fibrofatty content; LDACC: 26 block was trimmed 6.5 Blood Vessel Artery - Tibial 0007610 523 1274 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992125 132015 0.975799 0.994071 0.831502 21700 1 76 0.00241696 275 0 9.20316e+07 0.0238207 435372 9.25805e+07 8.63529e+06 21726 4.58202e+07 0 0.144297 0.994071 0.826572 9.20316e+07 0.00368601 1.97509e+07 6.25137e+06 1.99806e+07 260 1.9962e+07 1.67471e+07 0.00305025 1.99384e+07 49.9704 0.00470263 0.996016 0 50.289 GTEX-1CB4I-0626-SM-79OM1 1 B1 2 pieces; 0.6mm external fat on each; LDACC: 26 block was trimmed 7.2 Nerve Nerve - Tibial 0001323 524 1273 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.973091 198137 0.963979 0.977113 0.722449 23566 1 76 0.00529642 131 0 5.79904e+07 0.0357829 218265 5.93487e+07 1.40127e+07 23600 2.88368e+07 0 0.24153 0.977113 0.705915 5.79904e+07 0.00649508 1.26706e+07 6.45432e+06 1.27162e+07 119 1.27876e+07 8.14224e+06 0.00589328 1.28191e+07 50.0615 0.00367767 0.981135 0 50.0898 GTEX-1CB4I-0726-SM-7DUGS 1 B1 2 pieces; <5% fibrovascular content 7.5 Thyroid Thyroid 0002046 532 1265 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991723 333007 0.966875 0.992508 0.746144 24599 1 76 0.00274381 203 0 9.05818e+07 0.0327915 154346 9.12656e+07 8.22131e+06 24642 4.51169e+07 0 0.220732 0.992508 0.740554 9.05818e+07 0.00380783 1.98508e+07 8.95612e+06 1.99625e+07 220 2.00273e+07 1.54992e+07 0.0032754 1.98481e+07 49.7753 0.00169117 0.993293 0 50.1402 GTEX-1CB4I-0826-SM-7MGX1 1 B1 2 pieces; <5% fibrovascular content; LDACC: VARI noted refixed and recut 25 block 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 533 1264 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991025 121648 0.975 0.992768 0.802752 21503 1 76 0.00257483 136 0 6.26737e+07 0.0247983 392303 6.31302e+07 4.67424e+06 21519 3.12269e+07 0 0.172248 0.992768 0.796946 6.26737e+07 0.00340904 1.37811e+07 6.14438e+06 1.38784e+07 153 1.38673e+07 9.61855e+06 0.00299121 1.3897e+07 50.0535 0.00621419 0.994512 0 50.1758 GTEX-1CB4I-0926-SM-7MKFY 1 B1 2 pieces; active spermatogenesis 5.8 Testis Testis 0000473 535 1262 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984222 422673 0.933338 0.988717 0.726706 33609 1 76 0.00417521 165 0 8.85775e+07 0.0663973 1.04351e+06 8.95883e+07 1.33028e+07 33664 4.39332e+07 0 0.206632 0.988717 0.718506 8.85775e+07 0.0047637 1.86309e+07 1.32585e+07 1.88636e+07 192 1.90604e+07 1.27574e+07 0.00446812 1.87927e+07 49.6464 0.0116479 0.993212 0 50.3104 GTEX-1CB4I-1026-SM-7MKFZ 1 B1 6 pieces; up to 50% fibrovascular and fatty content in submucosal portion 8.2 Esophagus Esophagus - Mucosa 0006920 545 1252 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98366 333108 0.976407 0.989185 0.827886 23410 1 76 0.00369502 167 0 8.65841e+07 0.0232657 292988 8.75307e+07 1.17922e+07 23432 4.29154e+07 0 0.14852 0.989185 0.818933 8.65841e+07 0.00528427 1.92597e+07 1.1759e+07 1.95391e+07 189 1.97638e+07 1.7529e+07 0.0044852 1.95011e+07 49.6656 0.00334726 0.99471 0 50.3601 GTEX-1CB4I-1326-SM-79OLY 1 B1 2 pieces; 10% internal fat; 10% large blood vessels & ducts; block 26 trimmed 7 Pancreas Pancreas 0001150 553 1244 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.977995 185094 0.976463 0.981561 0.832937 21252 1 76 0.00508044 97 0 6.62371e+07 0.0231624 116903 6.74815e+07 1.55532e+07 21265 3.29551e+07 0 0.143526 0.981561 0.817578 6.62371e+07 0.00623424 1.51776e+07 1.61003e+07 1.53418e+07 102 1.54238e+07 1.83551e+07 0.00565524 1.53283e+07 49.8447 0.00173237 0.985126 0 50.2691 GTEX-1CB4I-1426-SM-79OLZ 1 B1 2 pieces; well demarcated lymphoid tissue 7 Spleen Spleen 0002106 557 1240 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.975583 229692 0.957349 0.979458 0.720638 24381 1 76 0.0053168 117 0 6.35049e+07 0.0418448 261166 6.48367e+07 1.48876e+07 24419 3.15494e+07 0 0.236711 0.979458 0.705835 6.35049e+07 0.00653215 1.37889e+07 9.06091e+06 1.38392e+07 126 1.39288e+07 8.92415e+06 0.00592207 1.39298e+07 50.0019 0.00402806 0.983333 0 50.0911 GTEX-1CB4I-1526-SM-7DHMY 1 B1 2 pieces; 5% internal fat 7.9 Heart Heart - Atrial Appendage 0006631 567 1230 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.991491 98586 0.977438 0.992697 0.823268 22162 1 76 0.00350373 146 0 6.96291e+07 0.0222858 927639 7.01414e+07 5.52675e+06 22177 3.46686e+07 0 0.15417 0.992697 0.817256 6.96291e+07 0.00524262 1.51457e+07 6.78709e+06 1.53972e+07 165 1.53577e+07 1.06531e+07 0.00437212 1.52523e+07 49.8279 0.0132253 0.993903 0 50.4117 GTEX-1CB4I-1626-SM-7RHGV 1 B1 2 pieces; enlarged nuclei; <5% internal fat 6.8 Heart Heart - Left Ventricle 0006566 567 1230 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.993018 169722 0.982746 0.99502 0.86334 21760 1 76 0.00237018 270 0 1.09743e+08 0.0170251 1.94622e+06 1.10292e+08 1.0658e+07 21774 5.46725e+07 0 0.119406 0.99502 0.859041 1.09743e+08 0.00355555 2.39702e+07 1.39892e+07 2.42869e+07 316 2.42746e+07 1.86353e+07 0.00296167 2.41592e+07 49.8809 0.017646 0.997021 0 50.3281 GTEX-1CB4I-1826-SM-793CX 1 B1 6 pieces; minimal plaque 7.6 Blood Vessel Artery - Aorta 0001496 569 1228 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993323 258821 0.975327 0.99464 0.833647 21256 1 76 0.00283219 131 0 5.84115e+07 0.0243238 176229 5.87263e+07 8.11488e+06 21270 2.90981e+07 0 0.14168 0.99464 0.829179 5.84115e+07 0.00366395 1.26156e+07 4.34678e+06 1.26902e+07 138 1.26955e+07 1.10706e+07 0.00324752 1.26857e+07 49.9807 0.00300086 0.995957 0 50.1475 GTEX-1CB4I-2026-SM-7DHMG 1 B1 6 pieces; multiple seedling leiomyomas (<1 mm) in 3 of 6 pieces [arrowed] 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 574 1223 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.99058 167979 0.975854 0.991789 0.839352 21489 1 76 0.00349709 165 0 7.32412e+07 0.0238798 548769 7.38476e+07 5.77627e+06 21508 3.64446e+07 0 0.136502 0.991789 0.832459 7.32412e+07 0.00536365 1.57413e+07 6.28634e+06 1.59807e+07 169 1.5953e+07 1.28492e+07 0.00442923 1.58471e+07 49.8335 0.0074311 0.992997 0 50.3774 GTEX-1CB4I-2126-SM-793AG 1 B1 2 pieces; mild emphysema; small foci of pigmented alveolar macrophages 8.7 Lung Lung 0008952 575 1222 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.994265 181106 0.973532 0.995298 0.807703 22679 1 76 0.00234964 119 0 5.42633e+07 0.02613 215044 5.45197e+07 4.37461e+06 22703 2.7037e+07 0 0.165829 0.995298 0.803905 5.42633e+07 0.00280165 1.2079e+07 4.34536e+06 1.2089e+07 123 1.21259e+07 1.03775e+07 0.00257541 1.20953e+07 49.9369 0.00394434 0.996331 0 50.0208 GTEX-1CB4I-2226-SM-7P8SL 3 B1 6 pieces; mucosa autolyzed, muscle intact 6.3 Colon Colon - Transverse 0001157 586 1211 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.919228 501567 0.972827 0.956822 0.814085 23831 1 76 0.00452355 140 0 7.87192e+07 0.0269447 703253 8.22715e+07 1.31107e+07 23851 3.76672e+07 0 0.158741 0.956822 0.778935 7.87192e+07 0.00945713 1.65174e+07 9.27585e+06 1.6521e+07 164 1.80292e+07 1.22333e+07 0.00689342 1.78894e+07 49.8054 0.00854796 0.994416 0 50.0054 GTEX-1CB4I-2526-SM-7MKG1 1 B1 4 pieces; 2 pure glands, 2 with 50% skin & fibrofatty tissue; LDACC: 26 block trimmed 7.4 Salivary Gland Minor Salivary Gland 0006330 591 1206 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983901 321485 0.971586 0.989062 0.791631 23550 1 76 0.0042331 118 0 6.00474e+07 0.0278616 236314 6.07115e+07 9.21656e+06 23574 2.97481e+07 0 0.179955 0.989062 0.782972 6.00474e+07 0.00497261 1.32401e+07 7.90401e+06 1.3459e+07 123 1.36536e+07 1.06662e+07 0.00460092 1.33416e+07 49.4221 0.00389241 0.994223 0 50.4099 GTEX-1CB4I-5004-SM-AN45V B1 Muscle Muscle - Skeletal 0011907 528 ChIP-Seq GTEX-1CB4I-5016-SM-AN45Z B1 Heart Heart - Left Ventricle 0006566 571 ChIP-Seq GTEX-1CB4J-0004-SM-7J38M B1 Blood Whole Blood 0013756 855 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1CB4J-0004-SM-7MA67 B1 Blood Whole Blood 0013756 855 BP-54698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/07/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1CB4J-0006-SM-ACKV6 B1 8.5 Blood Whole Blood 0013756 855 BP-54707 RNA isolation_PAXgene Blood RNA (Manual) 07/07/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.950224 292493 0.985592 0.951882 0.812713 17843 1 76 0.0024827 104 0 9.72378e+07 0.0131117 89661 1.02153e+08 1.44157e+07 17848 4.8369e+07 0 0.172878 0.951882 0.773607 9.72378e+07 0.00363943 2.34712e+07 1.99447e+08 2.33416e+07 148 2.33726e+07 2.90627e+07 0.00306006 2.36208e+07 50.264 0.000877711 0.95354 0 49.8616 GTEX-1CB4J-0008-SM-EXURH B1 7.4 Skin Cells - Cultured fibroblasts EFO_0002009 943 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.994105 711758 0.982988 0.994816 0.864156 19882 1 76 0.00140723 188 0 8.33286e+07 0.0167164 164166 8.37628e+07 2.08548e+06 19898 4.1527e+07 0 0.118831 0.994816 0.859676 8.33286e+07 0.00190338 1.88078e+07 6.69763e+06 1.89118e+07 183 1.89965e+07 2.16639e+07 0.00165513 1.87809e+07 49.7146 0.00195989 0.995527 0 50.1379 GTEX-1CB4J-0011-R10a-SM-9WG63 B1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 865 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991978 468802 0.965049 0.994074 0.816433 26170 1 76 0.00256311 278 0 1.12818e+08 0.0345901 5.7591e+06 1.1349e+08 8.02506e+06 26206 5.61723e+07 0 0.148616 0.994074 0.811595 1.12818e+08 0.00330976 2.48791e+07 1.6545e+07 2.51454e+07 324 2.51632e+07 1.82776e+07 0.00293565 2.50872e+07 49.9244 0.0507452 0.996169 0 50.2662 GTEX-1CB4J-0011-R1a-SM-9WG64 B1, A1 6.1 Brain Brain - Hippocampus 0001954 865 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991962 385962 0.958118 0.99411 0.812182 22895 1 76 0.00265068 134 0 6.05333e+07 0.0416311 5.45641e+06 6.0892e+07 4.57089e+06 22909 3.01381e+07 0 0.145936 0.99411 0.807397 6.05333e+07 0.00342959 1.32853e+07 1.25123e+07 1.34633e+07 155 1.34554e+07 8.01483e+06 0.00303929 1.34218e+07 49.9374 0.089608 0.996257 0 50.3328 GTEX-1CB4J-0011-R2a-SM-9WG5N B1, A1 6.9 Brain Brain - Substantia nigra 0002038 865 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7428 07/06/2015 TruSeq.v1 EXCLUDE 0.991976 323786 0.967703 0.994363 0.831517 23705 1 76 0.00261491 275 0 8.35991e+07 0.0320752 9.84913e+06 8.40731e+07 5.9954e+06 23727 4.16201e+07 0 0.136186 0.994363 0.826829 8.35991e+07 0.00374489 1.85186e+07 1.25715e+07 1.88812e+07 292 1.87394e+07 1.04389e+07 0.00317855 1.88437e+07 50.1388 0.11715 0.99675 0 50.4849 GTEX-1CB4J-0011-R3b-SM-9WG5Q B1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 865 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 EXCLUDE 0.991845 446238 0.966625 0.99404 0.841828 25326 1 76 0.00262445 274 0 1.05871e+08 0.0330366 1.25505e+07 1.06505e+08 7.64961e+06 25351 5.27093e+07 0 0.124797 0.99404 0.83681 1.05871e+08 0.00362051 2.34573e+07 1.7588e+07 2.38165e+07 329 2.37965e+07 1.52403e+07 0.00312138 2.36916e+07 49.8895 0.117839 0.996235 0 50.38 GTEX-1CB4J-0011-R4b-SM-9WG5P B1, A1 6.1 Brain Brain - Amygdala 0001876 865 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991801 363950 0.967436 0.994068 0.838317 24627 1 76 0.00269183 274 0 9.22374e+07 0.0323235 1.13223e+07 9.27879e+07 6.85855e+06 24657 4.59178e+07 0 0.129119 0.994068 0.833344 9.22374e+07 0.0037173 2.04648e+07 1.56576e+07 2.07863e+07 323 2.07337e+07 1.16702e+07 0.00320339 2.07087e+07 49.9698 0.122024 0.996335 0 50.3897 GTEX-1CB4J-0011-R5a-SM-9WG5Y B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 865 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 EXCLUDE 0.990638 454507 0.968605 0.992519 0.83201 24998 1 76 0.00278969 374 0 1.04561e+08 0.0311631 8.24097e+06 1.05349e+08 7.05662e+06 25028 5.20752e+07 0 0.136595 0.992519 0.825786 1.04561e+08 0.00347968 2.30694e+07 2.09379e+07 2.33954e+07 334 2.32879e+07 1.30209e+07 0.00313403 2.33588e+07 50.076 0.0782253 0.9944 0 50.3508 GTEX-1CB4J-0011-R6b-SM-9WG7B B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 865 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989478 349178 0.964088 0.992287 0.83471 25398 1 76 0.00271437 273 0 9.58513e+07 0.0355658 1.0634e+07 9.65964e+07 6.9983e+06 25429 4.76882e+07 0 0.129378 0.992287 0.828271 9.58513e+07 0.00380248 2.11341e+07 1.43792e+07 2.14615e+07 308 2.14818e+07 1.40219e+07 0.00325689 2.13676e+07 49.8667 0.110087 0.995095 0 50.3843 GTEX-1CB4J-0011-R7a-SM-9WG5O B1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 865 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7428 07/06/2015 TruSeq.v1 EXCLUDE 0.992817 215241 0.979024 0.995138 0.865631 18519 1 76 0.00281953 192 0 6.32524e+07 0.0208959 9.36553e+06 6.35614e+07 4.53288e+06 18525 3.15079e+07 0 0.113392 0.995138 0.861423 6.32524e+07 0.003717 1.39999e+07 2.35383e+07 1.41155e+07 240 1.40668e+07 3.38313e+06 0.00326722 1.41706e+07 50.1838 0.147346 0.997459 0 50.2055 GTEX-1CB4J-0011-R8a-SM-9QEHU B1, A1 6.4 Brain Brain - Hypothalamus 0001898 865 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989344 336158 0.958721 0.992413 0.836702 23456 1 76 0.00227544 198 0 6.65741e+07 0.041083 5.50005e+06 6.7083e+07 3.33268e+06 23474 3.31196e+07 0 0.12202 0.992413 0.830354 6.65741e+07 0.00427228 1.4515e+07 1.34732e+07 1.4821e+07 214 1.4792e+07 6.1238e+06 0.00327077 1.47215e+07 49.8806 0.0819887 0.995483 0 50.5216 GTEX-1CB4J-0126-SM-7PC3K 1 B1 6 pieces. Patchy atherosis up to ~0.5mm 6.6 Blood Vessel Artery - Aorta 0001496 923 532 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986665 314778 0.97647 0.990142 0.819526 22068 1 76 0.00338786 176 0 8.76916e+07 0.0231114 365106 8.85646e+07 1.43331e+07 22092 4.34987e+07 0 0.156945 0.990142 0.811447 8.76916e+07 0.00526609 1.88285e+07 9.10498e+06 1.90478e+07 189 1.91769e+07 1.73178e+07 0.00432368 1.89934e+07 49.7596 0.00412248 0.993619 0 50.2895 GTEX-1CB4J-0226-SM-7P8T4 1 B1 2 pieces, no abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 926 529 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.938574 310639 0.971012 0.966958 0.818383 23551 1 76 0.00440793 155 0 8.3721e+07 0.0288125 1.50193e+06 8.65819e+07 1.21786e+07 23571 4.05106e+07 0 0.152628 0.966958 0.791342 8.3721e+07 0.00864864 1.76919e+07 1.26328e+07 1.7224e+07 198 1.8432e+07 1.10403e+07 0.00646604 1.86224e+07 50.257 0.0173469 0.995342 0 49.33 GTEX-1CB4J-0326-SM-7PBZO 1 B1 2 pieces, moderate chronic ischemic change/insterstitial fibrosis-rep focus delineated 7.6 Heart Heart - Left Ventricle 0006566 928 527 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.990672 191598 0.980489 0.993696 0.84889 22284 1 76 0.00274199 269 0 1.10145e+08 0.0193062 2.5206e+06 1.10844e+08 1.31827e+07 22303 5.48087e+07 0 0.131599 0.993696 0.843538 1.10145e+08 0.00456061 2.44098e+07 1.9832e+07 2.44626e+07 311 2.46229e+07 1.82738e+07 0.00364853 2.45424e+07 49.9181 0.0227401 0.99672 0 50.054 GTEX-1CB4J-0526-SM-7DUGI 0 B1 2 pieces, no adnerent fat 7.5 Nerve Nerve - Tibial 0001323 943 512 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991726 225305 0.96745 0.992164 0.740225 23684 1 76 0.00286411 159 0 7.38233e+07 0.0322984 275363 7.44064e+07 6.38623e+06 23726 3.67313e+07 0 0.227225 0.992164 0.734425 7.38233e+07 0.0042765 1.6268e+07 6.81011e+06 1.63359e+07 160 1.6382e+07 1.15912e+07 0.00357 1.62589e+07 49.8114 0.0037008 0.992602 0 50.1041 GTEX-1CB4J-0626-SM-7DHMP 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~30-40 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 944 511 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988948 124860 0.97293 0.989746 0.794791 23461 1 76 0.00367295 152 0 6.92264e+07 0.0268184 303121 6.99436e+07 5.91043e+06 23485 3.44147e+07 0 0.178138 0.989746 0.786641 6.92264e+07 0.00559238 1.53042e+07 6.68829e+06 1.53729e+07 151 1.54067e+07 1.22673e+07 0.00463189 1.53255e+07 49.868 0.00433379 0.990543 0 50.1119 GTEX-1CB4J-0726-SM-7IGN8 1 B1 2 pieces, moderate chronic passive congestion 6.2 Liver Liver 0001114 940 515 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.992114 281195 0.978909 0.993017 0.877833 22118 1 76 0.00212703 377 0 1.31234e+08 0.020722 1.89935e+06 1.32157e+08 8.1124e+06 22138 6.54241e+07 0 0.101075 0.993017 0.871704 1.31234e+08 0.00299234 2.87627e+07 2.02271e+07 2.93537e+07 373 2.92539e+07 1.99953e+07 0.00255929 2.89704e+07 49.7566 0.014372 0.99392 0 50.5085 GTEX-1CB4J-1026-SM-7P8RW 0 B1 2 pieces, deatched luminal atherosis, one section, delineated 8.3 Blood Vessel Artery - Tibial 0007610 942 513 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.946809 278578 0.974723 0.970842 0.84662 23497 1 76 0.0041012 215 0 9.59687e+07 0.0248855 419190 9.88511e+07 1.52383e+07 23519 4.6666e+07 0 0.128104 0.970842 0.821934 9.59687e+07 0.00770052 2.01022e+07 1.10068e+07 2.02802e+07 237 2.14047e+07 2.05793e+07 0.00585631 2.11588e+07 49.7111 0.00424062 0.994875 0 50.2204 GTEX-1CB4J-1126-SM-7PBY1 0 B1 2 pieces, vascular elements/fascia are ~5% tissue, rep delineated 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 945 510 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988618 191544 0.976149 0.992074 0.805852 23981 1 76 0.00286858 282 0 1.12664e+08 0.0235421 479237 1.13564e+08 1.49587e+07 24018 5.60195e+07 0 0.170297 0.992074 0.799464 1.12664e+08 0.00473491 2.47443e+07 1.17764e+07 2.494e+07 304 2.50373e+07 2.0494e+07 0.0037985 2.5014e+07 49.9767 0.00421997 0.995529 0 50.1969 GTEX-1CB4J-1226-SM-7P8P3 0 B1 2 pieces, ~15-20% interstitial fat/vascular elements, rep. delineated 8.5 Muscle Muscle - Skeletal 0011907 946 509 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988782 315109 0.979749 0.990794 0.860392 21705 1 76 0.0029169 290 0 1.09223e+08 0.0199983 1.27331e+06 1.10238e+08 1.5789e+07 21720 5.43891e+07 0 0.119357 0.990794 0.852471 1.09223e+08 0.00339895 2.37848e+07 1.68424e+07 2.42433e+07 292 2.4344e+07 2.10029e+07 0.00315744 2.38793e+07 49.5182 0.0115506 0.992807 0 50.4774 GTEX-1CB4J-1326-SM-7P8RX 0 B1 6 pieces; squamous epithelium is 40-50 microns; no dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 946 509 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.937914 269674 0.971172 0.965948 0.783936 23895 1 76 0.00446257 168 0 8.06477e+07 0.028598 577869 8.34907e+07 1.32111e+07 23929 3.904e+07 0 0.187236 0.965948 0.757241 8.06477e+07 0.00854467 1.71925e+07 1.1169e+07 1.73445e+07 157 1.85002e+07 1.4051e+07 0.00644438 1.8294e+07 49.7198 0.00692136 0.993981 0 50.22 GTEX-1CB4J-1426-SM-7MKFR 1 B1 2 pieces, no abnormalities 7.1 Thyroid Thyroid 0002046 951 504 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.987016 218213 0.969795 0.991017 0.788357 23497 1 76 0.00419958 122 0 6.5036e+07 0.0299442 182013 6.56255e+07 9.92899e+06 23520 3.22741e+07 0 0.181438 0.991017 0.781275 6.5036e+07 0.00467461 1.40662e+07 6.99799e+06 1.43286e+07 134 1.44414e+07 1.16012e+07 0.00443614 1.42054e+07 49.5882 0.00277351 0.995019 0 50.462 GTEX-1CB4J-1526-SM-7MXVB 2 B1 2 pieces, hyperplastic glandular pattern; epithelium moderate autolyzed 6 Prostate Prostate 0002367 955 500 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975812 119827 0.963859 0.985438 0.770111 24624 1 76 0.00320489 143 0 7.13504e+07 0.0359174 555397 7.24048e+07 1.12444e+07 24651 3.52486e+07 0 0.193747 0.985438 0.758897 7.13504e+07 0.00449485 1.54074e+07 8.40356e+06 1.55153e+07 157 1.57604e+07 1.06382e+07 0.00384357 1.58091e+07 50.0772 0.00767072 0.995064 0 50.1746 GTEX-1CB4J-1626-SM-79OOK 1 B1 2 pieces, spermatogenesis is markedly reduced 6.5 Testis Testis 0000473 956 499 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381 01/14/2015 TruSeq.v1 EXCLUDE 0.992614 225382 0.95681 0.992722 0.726486 26441 1 76 0.00336046 129 0 7.02529e+07 0.0429915 1.20955e+06 7.0768e+07 4.07485e+06 26492 3.49811e+07 0 0.230324 0.992722 0.721199 7.02529e+07 0.00455585 1.53766e+07 6.95926e+06 1.54671e+07 148 1.55004e+07 9.41373e+06 0.00395809 1.535e+07 49.7563 0.0170917 0.992829 0 50.1467 GTEX-1CB4J-1726-SM-79OOL 1 B1 2 pieces, marked congestion; emphysematous changes 6.7 Lung Lung 0008952 957 498 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993217 120584 0.977812 0.993227 0.804849 22663 1 76 0.00314056 126 0 6.18647e+07 0.0219166 199752 6.22866e+07 3.63805e+06 22678 3.08136e+07 0 0.172964 0.993227 0.799397 6.18647e+07 0.00437163 1.36633e+07 6.01836e+06 1.37448e+07 138 1.37361e+07 1.15359e+07 0.00375609 1.36754e+07 49.8893 0.00320698 0.993236 0 50.1486 GTEX-1CB4J-1826-SM-7EWF9 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 6.5 Breast Breast - Mammary Tissue 0008367 960 495 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.992667 97977 0.976597 0.994454 0.818284 22338 1 76 0.00230341 131 0 5.61327e+07 0.0230843 242211 5.64458e+07 4.79917e+06 22357 2.79564e+07 0 0.158314 0.994454 0.813745 5.61327e+07 0.0033619 1.23805e+07 6.47221e+06 1.24986e+07 128 1.25022e+07 1.16117e+07 0.00283171 1.24714e+07 49.9383 0.00429104 0.99624 0 50.2373 GTEX-1CB4J-1926-SM-7MGX8 2 B1 6 pieces, glomeruli present, moderate-advanced tubular autoysis 5.6 Kidney Kidney - Cortex 0001225 966 489 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992884 103210 0.971996 0.994493 0.84555 22678 1 76 0.00285945 147 0 6.15453e+07 0.0278054 6.91724e+06 6.18861e+07 4.64468e+06 22695 3.06755e+07 0 0.126446 0.994493 0.840894 6.15453e+07 0.00351131 1.36723e+07 7.21662e+06 1.38317e+07 166 1.38417e+07 7.90928e+06 0.00318485 1.37569e+07 49.8464 0.111774 0.996103 0 50.2896 GTEX-1CB4J-2226-SM-7EWF5 1 B1 6 pieces, confirmed target muscularis 6.4 Esophagus Esophagus - Muscularis 0004648 970 485 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.991148 184207 0.970019 0.993081 0.779654 21996 1 76 0.00248632 122 0 5.85351e+07 0.0298026 1.06828e+06 5.89429e+07 5.05315e+06 22019 2.91268e+07 0 0.190365 0.993081 0.77426 5.85351e+07 0.00367593 1.27325e+07 6.06575e+06 1.28683e+07 141 1.28581e+07 8.26336e+06 0.00307997 1.2848e+07 49.9804 0.0181239 0.995014 0 50.2653 GTEX-1CB4J-2326-SM-7EPIF 1 B1 6 pieces, confirmed target muscularis 6.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 971 484 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990225 279326 0.968501 0.992555 0.768032 23564 1 76 0.00329802 124 0 8.69871e+07 0.0312974 1.29594e+06 8.76396e+07 1.15923e+07 23599 4.32996e+07 0 0.200469 0.992555 0.762314 8.69871e+07 0.0117567 1.87201e+07 8.8116e+06 1.89315e+07 149 1.89603e+07 1.28309e+07 0.00751742 1.88788e+07 49.8923 0.0147872 0.994885 0 50.2807 GTEX-1CB4J-2426-SM-7MXVC 1 B1 6 pieces, squamous mucosa up to ~0.7mm, ~50-70% thickness 6.9 Esophagus Esophagus - Mucosa 0006920 972 483 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978451 166068 0.970569 0.98733 0.776021 23957 1 76 0.00304892 144 0 7.90288e+07 0.0292123 389236 8.00429e+07 1.24387e+07 23989 3.90831e+07 0 0.194548 0.98733 0.766189 7.90288e+07 0.0042406 1.74051e+07 1.01306e+07 1.74639e+07 165 1.77496e+07 1.41866e+07 0.0036394 1.77915e+07 50.059 0.00486284 0.99621 0 50.0844 GTEX-1CB4J-2926-SM-7PBZ2 1 B1 3 pieces, no abnormalities 6.1 Brain Brain - Cortex 0001870 1003 452 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 EXCLUDE 0.985852 622472 0.955203 0.989973 0.794385 26134 1 76 0.00289963 376 0 1.08636e+08 0.044493 6.85886e+06 1.09736e+08 1.46497e+07 26165 5.39427e+07 0 0.160819 0.989973 0.786419 1.08636e+08 0.00533034 2.36033e+07 2.7733e+07 2.39487e+07 337 2.40208e+07 1.57855e+07 0.00410993 2.39538e+07 49.9301 0.0625031 0.994094 0 50.3632 GTEX-1CB4J-3126-SM-7MKFS 3 B1 1 piece, unusually advanced autolysis, mainly adenohypophysis, focal neurohypophysis, delineated 6.6 Pituitary Pituitary 0000007 1004 451 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979714 352946 0.96549 0.987285 0.776759 25393 1 76 0.00410428 159 0 7.98833e+07 0.0342724 765837 8.09122e+07 1.2617e+07 25427 3.95019e+07 0 0.188732 0.987285 0.766882 7.98833e+07 0.00542263 1.73545e+07 9.63454e+06 1.77182e+07 171 1.79913e+07 1.28429e+07 0.0047584 1.76625e+07 49.5389 0.00946504 0.994856 0 50.5184 GTEX-1E1VI-0003-SM-7J38L C1 Blood Whole Blood 0013756 832 BP-55099 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/16/2014 LCSET-6780,LCSET-7187 05/08/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1E1VI-0003-SM-7MA61 C1 Blood Whole Blood 0013756 832 BP-55099 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/16/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1E1VI-0005-SM-ARU6H C1 8.6 Blood Whole Blood 0013756 832 BP-55098 RNA isolation_PAXgene Blood RNA (Manual) 07/16/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.983213 268744 0.986773 0.984329 0.802179 17772 1 76 0.00219281 105 0 8.26172e+07 0.0127413 238764 8.39324e+07 2.73807e+06 17778 4.11543e+07 0 0.184594 0.984329 0.789609 8.26172e+07 0.00285245 1.96793e+07 1.12775e+08 1.96842e+07 137 1.97226e+07 2.24298e+07 0.00252226 1.97335e+07 50.0138 0.00284472 0.985446 0 50.0061 GTEX-1E1VI-0011-R10b-SM-ARU8F C1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 851 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993568 441088 0.966525 0.994959 0.853107 23351 1 76 0.00199899 269 0 8.46522e+07 0.0331197 4.72066e+06 8.50811e+07 2.92522e+06 23367 4.21741e+07 0 0.113419 0.994959 0.848806 8.46522e+07 0.0027573 1.85484e+07 1.15734e+07 1.88862e+07 302 1.88005e+07 9.51854e+06 0.00237761 1.87275e+07 49.9027 0.0554842 0.99635 0 50.4512 GTEX-1E1VI-0011-R11a-SM-9OSWI C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 851 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990007 488628 0.956335 0.992694 0.77024 24652 1 76 0.00282576 275 0 1.29691e+08 0.0432657 4.0463e+06 1.30645e+08 1.33348e+07 24688 6.44926e+07 0 0.186095 0.992694 0.764612 1.29691e+08 0.00363562 2.80815e+07 2.51549e+07 2.85053e+07 325 2.84506e+07 1.38544e+07 0.00322959 2.84338e+07 49.9852 0.0309716 0.99538 0 50.3744 GTEX-1E1VI-0011-R1a-SM-ARZMM C1, A1 6.1 Brain Brain - Hippocampus 0001954 851 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.982634 565124 0.96771 0.985249 0.803437 20744 1 76 0.00253997 269 0 7.28273e+07 0.0321609 8.7607e+06 7.39177e+07 3.32133e+06 20754 3.61443e+07 0 0.164273 0.985249 0.791586 7.28273e+07 0.00373757 1.50786e+07 4.84638e+07 1.59989e+07 260 1.57595e+07 4.92552e+06 0.00313718 1.54237e+07 49.4616 0.11852 0.987864 0 51.4806 GTEX-1E1VI-0011-R2a-SM-9QEGS C1, A1 6.1 Brain Brain - Substantia nigra 0002038 851 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.99075 332712 0.968872 0.993934 0.856448 22018 1 76 0.00204279 275 0 8.17558e+07 0.0309549 9.55036e+06 8.22548e+07 4.07896e+06 22030 4.06732e+07 0 0.112424 0.993934 0.851253 8.17558e+07 0.00414011 1.79073e+07 1.72746e+07 1.84102e+07 330 1.82011e+07 6.905e+06 0.00308809 1.83185e+07 50.1608 0.116107 0.997118 0 50.6925 GTEX-1E1VI-0011-R3a-SM-9OSWH C1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 851 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991886 288494 0.971416 0.994412 0.848819 23184 1 76 0.0026083 269 0 1.05055e+08 0.0283723 1.0368e+07 1.05645e+08 1.06955e+07 23195 5.23013e+07 0 0.122597 0.994412 0.844075 1.05055e+08 0.00350518 2.27927e+07 3.07493e+07 2.33388e+07 322 2.30463e+07 7.98157e+06 0.0030556 2.32735e+07 50.2452 0.0981401 0.996937 0 50.592 GTEX-1E1VI-0011-R4b-SM-9QEHV C1, A1 6.5 Brain Brain - Amygdala 0001876 851 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989818 224591 0.971388 0.993294 0.861236 21596 1 76 0.00205102 369 0 7.83809e+07 0.0284844 1.0084e+07 7.89101e+07 3.95412e+06 21606 3.89885e+07 0 0.110152 0.993294 0.855461 7.83809e+07 0.00442165 1.71052e+07 1.81171e+07 1.76081e+07 343 1.72708e+07 4.68498e+06 0.00323219 1.76369e+07 50.5244 0.127791 0.99677 0 50.7243 GTEX-1E1VI-0011-R5b-SM-9WG5V C1, A1 5.8 Brain Brain - Caudate (basal ganglia) 0001873 851 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992762 259853 0.977745 0.994788 0.855237 21761 1 76 0.00257665 373 0 1.23612e+08 0.0221613 1.63429e+07 1.24259e+08 8.70212e+06 21772 6.15995e+07 0 0.122508 0.994788 0.850779 1.23612e+08 0.00357174 2.69059e+07 4.60456e+07 2.76057e+07 353 2.6876e+07 6.45881e+06 0.00307318 2.77773e+07 50.8246 0.131523 0.996813 0 50.6419 GTEX-1E1VI-0011-R6a-SM-9OSVJ C1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 851 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991722 373343 0.969786 0.994069 0.840908 23888 1 76 0.00258272 270 0 1.22085e+08 0.0300451 1.29986e+07 1.22814e+08 1.16164e+07 23911 6.07927e+07 0 0.128878 0.994069 0.835921 1.22085e+08 0.00364216 2.64728e+07 3.99812e+07 2.70006e+07 326 2.66321e+07 9.18206e+06 0.00311119 2.70427e+07 50.3825 0.10584 0.996416 0 50.4935 GTEX-1E1VI-0011-R7b-SM-9QEGR C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 851 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990522 460911 0.970248 0.993357 0.840796 20976 1 76 0.00198593 368 0 1.00812e+08 0.0296609 1.31352e+07 1.01487e+08 4.55655e+06 20984 5.01912e+07 0 0.129452 0.993357 0.83521 1.00812e+08 0.00395113 2.15706e+07 4.6165e+07 2.22933e+07 336 2.18357e+07 4.88018e+06 0.00296573 2.22383e+07 50.4567 0.129428 0.996191 0 50.8238 GTEX-1E1VI-0011-R8b-SM-ARU8E C1, A1 7 Brain Brain - Hypothalamus 0001898 851 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992558 683680 0.960189 0.993931 0.832725 24845 1 76 0.00204721 269 0 9.49728e+07 0.0394696 5.59866e+06 9.55528e+07 3.19887e+06 24876 4.73172e+07 0 0.127463 0.993931 0.827671 9.49728e+07 0.00270209 2.08035e+07 1.99437e+07 2.10973e+07 327 2.1049e+07 1.03744e+07 0.0023742 2.09586e+07 49.8924 0.0585923 0.995303 0 50.3505 GTEX-1E1VI-0126-SM-7DHMZ 2 C1 6 pieces; 5-15% internal and residual attached fat, epidermis measures 39 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 969 1316 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.990374 104028 0.970772 0.991641 0.757291 23574 1 76 0.00360834 158 0 6.81207e+07 0.028999 259125 6.8695e+07 5.42529e+06 23607 3.39053e+07 0 0.213481 0.991641 0.75096 6.81207e+07 0.00532088 1.48573e+07 6.56124e+06 1.49659e+07 143 1.50033e+07 1.13135e+07 0.00446352 1.48986e+07 49.825 0.00377211 0.992907 0 50.182 GTEX-1E1VI-0226-SM-793CZ 1 C1 2 pieces; mature adipose tissue, 1 piece includes ~10% fibrous tissue 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 971 1315 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993395 335569 0.975041 0.994695 0.796879 22657 1 76 0.0028755 147 0 6.83857e+07 0.0246313 366063 6.87504e+07 9.41423e+06 22685 3.40638e+07 0 0.178162 0.994695 0.792652 6.83857e+07 0.00352935 1.50085e+07 6.06356e+06 1.50282e+07 154 1.50768e+07 1.20153e+07 0.003202 1.50468e+07 49.9503 0.00532452 0.995995 0 50.0328 GTEX-1E1VI-0326-SM-793D1 1 C1 6 pieces; up to 10% predominantly periadnexal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 980 1307 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.992138 327332 0.974009 0.993616 0.79864 23959 1 76 0.00292437 147 0 6.967e+07 0.025728 404344 7.01176e+07 1.02765e+07 23985 3.46978e+07 0 0.17537 0.993616 0.793541 6.967e+07 0.00359021 1.55288e+07 7.91437e+06 1.55473e+07 152 1.5597e+07 1.31826e+07 0.0032568 1.55803e+07 49.9733 0.00576666 0.995095 0 50.0298 GTEX-1E1VI-0426-SM-7DHN1 1 C1 2 pieces; scant internal fat 8.3 Muscle Muscle - Skeletal 0011907 986 1302 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.992578 113566 0.985076 0.993832 0.878058 19378 1 76 0.00326359 198 0 7.66349e+07 0.0147087 964024 7.71106e+07 5.8809e+06 19386 3.81866e+07 0 0.107018 0.993832 0.872642 7.66349e+07 0.00487169 1.64443e+07 1.01583e+07 1.67512e+07 203 1.66744e+07 1.44502e+07 0.00406663 1.65976e+07 49.8846 0.0125018 0.995085 0 50.4622 GTEX-1E1VI-0526-SM-79OM2 1 C1 2 pieces; includes ~10% attached and internal fat 7.1 Nerve Nerve - Tibial 0001323 1000 1288 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.977128 174072 0.967199 0.980985 0.726524 23199 1 76 0.00515809 129 0 5.55455e+07 0.0325095 255548 5.66222e+07 1.30341e+07 23223 2.76254e+07 0 0.240674 0.980985 0.71271 5.55455e+07 0.00636114 1.22068e+07 5.23618e+06 1.22423e+07 113 1.23116e+07 8.17136e+06 0.00575725 1.23382e+07 50.0539 0.00451322 0.984842 0 50.0727 GTEX-1E1VI-0626-SM-7PBZ1 1 C1 2 pieces; well trimmed 7.1 Blood Vessel Artery - Tibial 0007610 1001 1288 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989794 199492 0.975058 0.992862 0.835615 22374 1 76 0.00278614 280 0 1.09278e+08 0.0244947 831349 1.10064e+08 1.47627e+07 22400 5.43382e+07 0 0.139443 0.992862 0.829651 1.09278e+08 0.0042959 2.33529e+07 8.89028e+06 2.36e+07 307 2.36473e+07 2.07218e+07 0.00353869 2.3614e+07 49.9648 0.00755335 0.99593 0 50.2631 GTEX-1E1VI-0726-SM-7P8QJ 2 C1 2 pieces; 1 piece includes small portion of attached fat (~5%), vague nodularity 6.1 Thyroid Thyroid 0002046 1048 1242 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989606 527229 0.962961 0.991958 0.732568 26192 1 76 0.00301758 276 0 1.20157e+08 0.0367157 824075 1.21131e+08 1.66722e+07 26247 5.97869e+07 0 0.230393 0.991958 0.726677 1.20157e+08 0.00410168 2.61484e+07 1.841e+07 2.64777e+07 294 2.65986e+07 1.79099e+07 0.00355835 2.62945e+07 49.7125 0.00680318 0.994311 0 50.3129 GTEX-1E1VI-0926-SM-7P8T3 1 C1 2 pieces; includes pleura (not target region), some congestion and collection of pigmented macrophages 7.3 Lung Lung 0008952 1051 1240 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.945595 281505 0.968335 0.969634 0.744207 25100 1 76 0.00446014 138 0 7.86656e+07 0.0311043 403451 8.11292e+07 1.19322e+07 25142 3.82217e+07 0 0.224128 0.969634 0.721609 7.86656e+07 0.00817906 1.68434e+07 9.37206e+06 1.70212e+07 149 1.80008e+07 1.22237e+07 0.0062735 1.7739e+07 49.6338 0.00497295 0.993674 0 50.2626 GTEX-1E1VI-1026-SM-7MKGQ 2 C1 2 pieces; spermatogenesis is reduced 6.1 Testis Testis 0000473 1052 1239 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984224 307218 0.929916 0.988897 0.725957 32285 1 76 0.00389297 131 0 7.00157e+07 0.0697815 1.0155e+06 7.08018e+07 9.94456e+06 32347 3.47291e+07 0 0.203959 0.988897 0.717897 7.00157e+07 0.00520062 1.46003e+07 1.05851e+07 1.47054e+07 135 1.488e+07 1.06169e+07 0.0045437 1.47133e+07 49.7184 0.0143429 0.993571 0 50.1794 GTEX-1E1VI-1226-SM-7RHGD 1 C1 6 pieces; atherosclerosis 6.6 Blood Vessel Artery - Aorta 0001496 1058 1234 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990544 142551 0.973185 0.99241 0.762641 23336 1 76 0.002646 208 0 9.27014e+07 0.0263979 271934 9.34104e+07 9.0356e+06 23367 4.61306e+07 0 0.210544 0.99241 0.756853 9.27014e+07 0.00380147 2.00311e+07 7.53613e+06 2.01734e+07 227 2.01918e+07 1.54696e+07 0.00322265 2.01825e+07 49.9885 0.00291118 0.994277 0 50.1769 GTEX-1E1VI-1326-SM-7IGQD 1 C1 2 pieces; interstitial and focal patchy fibrosis, areas of increased eosinophilia and fragmentation of fibers (?recent ischemia) 5.8 Heart Heart - Left Ventricle 0006566 1059 1234 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99586 160878 0.980413 0.995992 0.855636 20846 1 76 0.00186696 264 0 8.29069e+07 0.0194558 1.03212e+07 8.32405e+07 3.40314e+06 20857 4.13408e+07 0 0.124777 0.995992 0.852207 8.29069e+07 0.00234569 1.84135e+07 1.67737e+07 1.87715e+07 303 1.88174e+07 8.9759e+06 0.00210629 1.83786e+07 49.4102 0.123993 0.996125 0 50.4814 GTEX-1E1VI-1426-SM-793CY 1 C1 2 pieces; interstitial fibrosis, 1 piece is ~10% fat 7.8 Heart Heart - Atrial Appendage 0006631 1061 1232 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993962 332209 0.978581 0.995227 0.804203 22132 1 76 0.00279123 126 0 6.79382e+07 0.0210386 795713 6.8264e+07 9.35119e+06 22155 3.38485e+07 0 0.174377 0.995227 0.800365 6.79382e+07 0.00340898 1.4733e+07 6.577e+06 1.47484e+07 147 1.48084e+07 1.24895e+07 0.00309971 1.47517e+07 49.904 0.0116564 0.996491 0 50.026 GTEX-1E1VI-1526-SM-7IGQ2 1 C1 6 pieces; partial sloughing of squamous epithelium 5.8 Esophagus Esophagus - Mucosa 0006920 1061 1233 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994483 167884 0.970597 0.994873 0.831733 22073 1 76 0.00195852 153 0 6.29941e+07 0.029262 1.35662e+06 6.33187e+07 2.35944e+06 22089 3.13971e+07 0 0.138865 0.994873 0.827469 6.29941e+07 0.00255046 1.39957e+07 7.94956e+06 1.42805e+07 187 1.4202e+07 7.05663e+06 0.00225438 1.40927e+07 49.807 0.0214253 0.995264 0 50.5035 GTEX-1E1VI-1626-SM-7EPIL 1 C1 6 pieces; target muscularis 6.9 Esophagus Esophagus - Muscularis 0004648 1063 1232 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990878 149232 0.973637 0.993155 0.797188 23180 1 76 0.00309227 130 0 8.76176e+07 0.0261153 1.64991e+06 8.82214e+07 1.18917e+07 23205 4.36417e+07 0 0.17645 0.993155 0.791731 8.76176e+07 0.0115277 1.89634e+07 8.31499e+06 1.92521e+07 159 1.92563e+07 1.26622e+07 0.0073003 1.91379e+07 49.8459 0.0187019 0.995432 0 50.3777 GTEX-1E1VI-1826-SM-9WG5J 1 C1 2 pieces; mature adipose tissue 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1065 1231 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.99042 186088 0.975807 0.992932 0.77064 23952 1 76 0.00255923 206 0 8.74628e+07 0.0239083 918271 8.80854e+07 6.22708e+06 23987 4.35187e+07 0 0.205168 0.992932 0.765193 8.74628e+07 0.00366232 1.93027e+07 8.95237e+06 1.95258e+07 229 1.95731e+07 1.27051e+07 0.00310938 1.94675e+07 49.8648 0.0104248 0.995444 0 50.2872 GTEX-1E1VI-2726-SM-7MXVH 2 C1 2 pieces; fibromusculars stroma and glands, epithelium largely sloughed, focal chronic inflammation 5.9 Prostate Prostate 0002367 1083 1218 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975636 134408 0.968528 0.985336 0.757734 23799 1 76 0.00305188 130 0 6.71174e+07 0.03128 1.42277e+06 6.81162e+07 1.09089e+07 23827 3.31608e+07 0 0.210794 0.985336 0.746623 6.71174e+07 0.00434599 1.48088e+07 9.32859e+06 1.48887e+07 154 1.51352e+07 8.11140e+06 0.00369257 1.51761e+07 50.0675 0.0208874 0.995037 0 50.1346 GTEX-1E1VI-2826-SM-7MGWU 2 C1 6 pieces; mucosa and muscularis 5.7 Stomach Stomach 0000945 1083 1219 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.990384 88214 0.980488 0.992292 0.875164 20299 1 76 0.00263906 223 0 5.37917e+07 0.0193215 3.32189e+06 5.42096e+07 4.14067e+06 20307 2.67996e+07 0 0.105325 0.992292 0.868418 5.37917e+07 0.00347077 1.22633e+07 2.89152e+07 1.24982e+07 180 1.24392e+07 7.70148e+06 0.00305412 1.24118e+07 49.9449 0.0612787 0.9942 0 50.4744 GTEX-1E1VI-2926-SM-7IGLT 1 C1 4 pieces (fragmented) 6.2 Brain Brain - Cerebellum 0002037 1086 1216 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993054 808329 0.936012 0.993997 0.75656 24136 1 76 0.00223598 269 0 1.14519e+08 0.0637161 5.10107e+06 1.1521e+08 7.07276e+06 24166 5.70991e+07 0 0.179452 0.993997 0.752018 1.14519e+08 0.00286443 2.40738e+07 5.90311e+07 2.49493e+07 327 2.46964e+07 8.86021e+06 0.00254991 2.44204e+07 49.7191 0.0442761 0.994941 0 50.893 GTEX-1E1VI-3026-SM-7RHHU 1 C1 4 pieces; mild to moderate (focal) autolysis 6.8 Brain Brain - Cortex 0001870 1089 1214 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992413 352875 0.965629 0.994531 0.842481 23779 1 76 0.00239444 267 0 9.56868e+07 0.034075 6.53934e+06 9.62129e+07 8.84605e+06 23800 4.76507e+07 0 0.123148 0.994531 0.837873 9.56868e+07 0.0039517 2.09467e+07 2.16229e+07 2.12507e+07 327 2.11536e+07 9.57041e+06 0.00317141 2.12109e+07 50.0676 0.0679674 0.99665 0 50.3602 GTEX-1E1VI-3126-SM-7IGNP 2 C1 1 piece; adenohypophysis and neurohypophysis 6.1 Pituitary Pituitary 0000007 1090 1213 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6445 02/26/2015 TruSeq.v1 EXCLUDE 0.992769 322554 0.969199 0.99376 0.83026 23019 1 76 0.00209912 194 0 7.04194e+07 0.0306712 5.55667e+06 7.08616e+07 4.58266e+06 23036 3.51088e+07 0 0.138939 0.99376 0.825079 7.04194e+07 0.00286482 1.54822e+07 1.65639e+07 1.59537e+07 233 1.58167e+07 6.44002e+06 0.00248159 1.56800e+07 49.7831 0.0784159 0.994751 0 50.7499 GTEX-1E2YA-0002-SM-DIND7 C1 Blood Whole Blood 0013756 471 BP-55099 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/16/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1E2YA-0002-SM-DLIOW C1 Blood Whole Blood 0013756 471 BP-55099 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/16/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1E2YA-0006-SM-AHZ23 C1 8.8 Blood Whole Blood 0013756 471 BP-55098 RNA isolation_PAXgene Blood RNA (Manual) 07/16/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.969863 561690 0.976898 0.971441 0.800865 19639 1 76 0.00710122 132 0 1.01745e+08 0.0216697 279405 1.04736e+08 1.98534e+07 19649 5.05653e+07 0 0.176033 0.971441 0.777993 1.01745e+08 0.00910582 2.34107e+07 1.12021e+08 2.35882e+07 150 2.36124e+07 2.55656e+07 0.00810189 2.35626e+07 49.9472 0.0026677 0.973018 0 50.1889 GTEX-1E2YA-0008-SM-EXURI C1 7.8 Skin Cells - Cultured fibroblasts EFO_0002009 561 BP-57289 RNA isolation_Trizol Manual (Cell Pellet) 10/17/2014 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.994562 614009 0.983127 0.995157 0.862975 19342 1 76 0.0013791 163 0 7.53954e+07 0.0165493 130586 7.57623e+07 1.70705e+06 19352 3.75777e+07 0 0.120152 0.995157 0.858796 7.53954e+07 0.00181237 1.70397e+07 6.15528e+06 1.71165e+07 164 1.71887e+07 1.96478e+07 0.0015956 1.70114e+07 49.7409 0.00172363 0.995751 0 50.1124 GTEX-1E2YA-0011-R1b-SM-CJI29 C1, A1 6.9 Brain Brain - Hippocampus 0001954 485 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990953 749809 0.958485 0.992892 0.82138 21740 1 76 0.00191177 155 0 6.11059e+07 0.041299 4.88637e+06 6.15434e+07 3.85580e+06 21754 3.03987e+07 0 0.137105 0.992892 0.815542 6.11059e+07 0.00230684 1.30269e+07 2.27277e+07 1.3686e+07 193 1.36027e+07 5.43328e+06 0.00210892 1.32094e+07 49.2665 0.0793971 0.99483 0 51.2337 GTEX-1E2YA-0011-R5a-SM-9QEGT C1, A1 6.4 Brain Brain - Caudate (basal ganglia) 0001873 485 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991186 425792 0.96824 0.994009 0.834171 22823 1 76 0.00156279 265 0 9.27821e+07 0.0315878 7.86159e+06 9.33414e+07 4.34093e+06 22836 4.61912e+07 0 0.134069 0.994009 0.829173 9.27821e+07 0.00362168 2.00429e+07 3.38852e+07 2.05016e+07 324 2.02657e+07 6.82675e+06 0.00258931 2.0477e+07 50.2593 0.0842241 0.996832 0 50.5656 GTEX-1E2YA-0011-R6b-SM-CE6R2 C1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 485 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987478 439498 0.970561 0.989408 0.833641 19049 1 76 0.00744306 193 0 7.1823e+07 0.0293923 1.05605e+07 7.25919e+07 1.11352e+07 19054 3.57344e+07 0 0.13692 0.989408 0.824811 7.1823e+07 0.00759564 1.52564e+07 4.0372e+07 1.59363e+07 229 1.56908e+07 2.4428e+06 0.0075192 1.55661e+07 49.8004 0.145478 0.991338 0 51.0898 GTEX-1E2YA-0011-R7a-SM-CJI1Z C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 485 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.989471 1.07722e+06 0.960344 0.990962 0.807957 20339 1 76 0.00163649 370 0 1.11616e+08 0.0395812 1.41158e+07 1.12634e+08 6.57332e+06 20346 5.55811e+07 0 0.152387 0.990962 0.800655 1.11616e+08 0.00231907 2.29819e+07 8.54938e+07 2.44e+07 415 2.38913e+07 5.6219e+06 0.00197727 2.35831e+07 49.6754 0.125324 0.992453 0 51.4965 GTEX-1E2YA-0011-R8a-SM-CKZNG C1, A1 7 Brain Brain - Hypothalamus 0001898 485 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991505 398119 0.964568 0.994003 0.835747 23701 1 76 0.00183773 370 0 8.01504e+07 0.035241 6.25906e+06 8.0634e+07 7.726e+06 23716 3.98939e+07 0 0.128822 0.994003 0.830735 8.01504e+07 0.00337202 1.74925e+07 1.89528e+07 1.78817e+07 355 1.78466e+07 6.09517e+06 0.00260295 1.76867e+07 49.7751 0.0776231 0.996502 0 50.5502 GTEX-1E2YA-0126-SM-9KNUC 0 C1 6 pieces, no dermal fat; squamous epithelium is ~30-40 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 560 512 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993451 213092 0.973519 0.99437 0.762744 23568 1 76 0.00263403 302 0 9.6924e+07 0.0262214 351797 9.74727e+07 1.10961e+07 23616 4.83176e+07 0 0.210775 0.99437 0.758449 9.6924e+07 0.00324737 2.11239e+07 1.08431e+07 2.12723e+07 271 2.12781e+07 1.55854e+07 0.00294042 2.1204e+07 49.9128 0.00360918 0.995289 0 50.175 GTEX-1E2YA-0226-SM-9MQLY 0 C1 2 pieces, ~10% fascia/vascular elements; rep delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 562 511 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984513 301672 0.973644 0.986825 0.773903 21991 1 76 0.00567568 122 0 5.82936e+07 0.0260867 379805 5.90719e+07 7.4242e+06 22014 2.89884e+07 0 0.199742 0.986825 0.763706 5.82936e+07 0.00708473 1.2735e+07 6.43279e+06 1.29281e+07 129 1.29413e+07 8.67005e+06 0.00637855 1.28494e+07 49.822 0.00642954 0.989137 0 50.3762 GTEX-1E2YA-0326-SM-9KNW8 0 C1 2 pieces, no adherent fat 6.7 Nerve Nerve - Tibial 0001323 564 509 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992981 227180 0.970589 0.993787 0.754755 26609 1 76 0.0025061 401 0 1.54223e+08 0.0290727 625189 1.55187e+08 1.65448e+07 26681 7.6884e+07 0 0.215834 0.993787 0.750065 1.54223e+08 0.00303027 3.40011e+07 1.51446e+07 3.42428e+07 331 3.41953e+07 2.48905e+07 0.00276797 3.41675e+07 49.9797 0.00402862 0.994594 0 50.1771 GTEX-1E2YA-0426-SM-7RHFZ 0 C1 2 pieces, no adherent fat, no atherosis 5.9 Blood Vessel Artery - Tibial 0007610 565 509 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991538 127669 0.97343 0.993613 0.792384 21917 1 76 0.00244009 166 0 8.19046e+07 0.0261904 431092 8.24311e+07 7.55992e+06 21944 4.07669e+07 0 0.181045 0.993613 0.787323 8.19046e+07 0.00396188 1.75766e+07 5.94971e+06 1.77487e+07 199 1.77597e+07 1.41907e+07 0.0031994 1.77237e+07 49.9492 0.00522973 0.995688 0 50.2436 GTEX-1E2YA-0526-SM-7P8RY 0 C1 2 pieces, ~20% interstitial fat/vascular elements 8.3 Muscle Muscle - Skeletal 0011907 567 508 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.950803 252714 0.983292 0.973442 0.874516 19816 1 76 0.00371171 117 0 6.5643e+07 0.0164468 813804 6.74338e+07 1.04014e+07 19820 3.198e+07 0 0.108777 0.973442 0.85129 6.5643e+07 0.00742465 1.39768e+07 8.73725e+06 1.38235e+07 138 1.45998e+07 1.40323e+07 0.005525 1.46149e+07 50.0259 0.0120682 0.996082 0 49.7242 GTEX-1E2YA-0626-SM-7P8P4 1 C1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 580 495 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990108 339320 0.97744 0.991968 0.798127 23318 1 76 0.00285856 270 0 1.01069e+08 0.0222835 1.06086e+06 1.01887e+08 1.25869e+07 23350 5.03283e+07 0 0.179313 0.991968 0.791717 1.01069e+08 0.00339075 2.14069e+07 1.15864e+07 2.18716e+07 258 2.19648e+07 1.7402e+07 0.00312416 2.14802e+07 49.4423 0.0104121 0.993828 0 50.5368 GTEX-1E2YA-0926-SM-7MXUK 1 C1 2 pieces, patchy acute/chronic pneumonitis, hemmorhagic, moderate congestion, ensquared 6.9 Lung Lung 0008952 587 490 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975299 158490 0.97497 0.985298 0.724717 22569 1 76 0.00333611 133 0 7.49567e+07 0.0246612 644006 7.60752e+07 1.16025e+07 22601 3.70038e+07 0 0.250253 0.985298 0.714062 7.49567e+07 0.00464244 1.64495e+07 8.40694e+06 1.65208e+07 158 1.68301e+07 1.00534e+07 0.00398265 1.68491e+07 50.0282 0.00846539 0.995296 0 50.1081 GTEX-1E2YA-1226-SM-7MGY3 1 C1 2 pieces, marked passive congestion, approaching hemorrhagic infarcts, rep delineated; macrovesicular steatosis involves ~20% of parenchyma 6.5 Liver Liver 0001114 597 481 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989557 273794 0.967119 0.991547 0.805975 21515 1 76 0.00295381 148 0 6.90753e+07 0.031224 1.35212e+06 6.96642e+07 5.41364e+06 21535 3.43612e+07 0 0.161144 0.991547 0.799162 6.90753e+07 0.00382473 1.5002e+07 1.58395e+07 1.51009e+07 171 1.51604e+07 9.7942e+06 0.00338839 1.50681e+07 49.8475 0.0194092 0.993537 0 50.1643 GTEX-1E2YA-1626-SM-7MGXS 2 C1 6 pieces, glomeruli present; tubules with advanced autolysis/sloughing 5.6 Kidney Kidney - Cortex 0001225 607 474 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991568 179133 0.976677 0.994007 0.844432 22634 1 76 0.00257722 188 0 6.55522e+07 0.0229579 2.67312e+06 6.59474e+07 5.08707e+06 22651 3.26281e+07 0 0.132245 0.994007 0.839371 6.55522e+07 0.00367752 1.46103e+07 1.06649e+07 1.47796e+07 208 1.48206e+07 5.88046e+06 0.00312602 1.47028e+07 49.8005 0.0405341 0.996446 0 50.288 GTEX-1E2YA-1926-SM-7P8QH 1 C1 6 pieces, confirmed target muscularis 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 610 473 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989616 296994 0.97365 0.99227 0.789302 24417 1 76 0.00294136 271 0 1.06458e+08 0.0261026 1.12243e+06 1.07287e+08 1.46003e+07 24446 5.29487e+07 0 0.184348 0.99227 0.7832 1.06458e+08 0.00448607 2.32119e+07 1.04931e+07 2.35782e+07 327 2.36272e+07 1.4488e+07 0.00371165 2.3427e+07 49.7872 0.0104619 0.994924 0 50.3914 GTEX-1E2YA-2126-SM-7MXUO 0 C1 6 pieces, trace dermal fat, delineated; squamous epithelium is ~30-40 microns 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 614 469 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.983115 117525 0.977135 0.989881 0.866677 22029 1 76 0.00265589 136 0 5.96337e+07 0.0226307 273907 6.02433e+07 7.63795e+06 22040 2.95639e+07 0 0.110458 0.989881 0.857907 5.96337e+07 0.00393395 1.31113e+07 8.4643e+06 1.32131e+07 143 1.33505e+07 1.1987e+07 0.00329055 1.33574e+07 50.0129 0.00454668 0.996646 0 50.1935 GTEX-1E2YA-2426-SM-7EPIG 2 C1 6 pieces, mucosa with moderately advanced autolysis, up to ~1mm, ~30-40% thickness 6.9 Stomach Stomach 0000945 621 464 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990887 270632 0.973026 0.993144 0.800541 23703 1 76 0.00308912 146 0 9.54372e+07 0.0266801 584393 9.6096e+07 1.29201e+07 23742 4.75137e+07 0 0.172485 0.993144 0.795053 9.54372e+07 0.0116061 2.04859e+07 9.3992e+06 2.07372e+07 166 2.07522e+07 1.63214e+07 0.00733793 2.06703e+07 49.9011 0.00608134 0.995401 0 50.3049 GTEX-1E2YA-2526-SM-7IGOU 1 C1 6 pieces, confirmed target muscularis, minute nubbin of autolyzed mucosa delineated 5.8 Colon Colon - Sigmoid 0001159 623 463 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994939 209994 0.967949 0.99521 0.801303 22207 1 76 0.00191915 159 0 7.42959e+07 0.0318446 865062 7.46535e+07 3.4474e+06 22226 3.7017e+07 0 0.166646 0.99521 0.797465 7.42959e+07 0.00243778 1.5958e+07 7.92852e+06 1.62193e+07 193 1.61904e+07 1.10822e+07 0.0021784 1.60151e+07 49.7278 0.0115877 0.995481 0 50.406 GTEX-1E2YA-2626-SM-7MGWW 3 C1 6 pieces, mucusa up to ~0.2mm, completely autolyzed/sloughing 5.6 Colon Colon - Transverse 0001157 625 462 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.987852 117277 0.966459 0.989804 0.792376 23638 1 76 0.00335316 119 0 5.6579e+07 0.0307321 516123 5.71619e+07 4.25776e+06 23661 2.80938e+07 0 0.174083 0.989804 0.784297 5.6579e+07 0.00432546 1.24217e+07 8.77541e+06 1.24932e+07 135 1.2506e+07 8.12817e+06 0.00383835 1.25136e+07 50.0152 0.00902915 0.991755 0 50.1435 GTEX-1E2YA-2726-SM-7IGPW 1 C1 2 pieces, fibroadipose elements only 5.7 Breast Breast - Mammary Tissue 0008367 626 461 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993767 180960 0.976384 0.994081 0.785183 22789 1 76 0.00189882 153 0 6.98241e+07 0.023276 356441 7.02398e+07 2.68126e+06 22814 3.47957e+07 0 0.191202 0.994081 0.780535 6.98241e+07 0.00229684 1.53737e+07 6.80986e+06 1.55597e+07 168 1.55502e+07 1.15446e+07 0.00209777 1.54102e+07 49.7738 0.00507463 0.994396 0 50.3006 GTEX-1E2YA-2826-SM-7EPIN 2 C1 2 pieces. Spermatogenesis appears reduced. 6.8 Testis Testis 0000473 628 460 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989686 213592 0.950598 0.9921 0.735381 32031 1 76 0.00317141 133 0 9.08133e+07 0.0491371 1.13798e+06 9.15365e+07 1.19492e+07 32095 4.5232e+07 0 0.215217 0.9921 0.729571 9.08133e+07 0.0114603 1.95193e+07 1.21895e+07 1.97927e+07 147 1.98464e+07 1.34275e+07 0.00730578 1.96578e+07 49.7613 0.012432 0.994513 0 50.3478 GTEX-1E2YA-2926-SM-7MGWX 1 C1 4 pieces, no abnormalities 5.7 Brain Brain - Cerebellum 0002037 632 456 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989747 891421 0.90544 0.992117 0.736844 21917 1 76 0.00258662 144 0 6.35417e+07 0.0943297 3.09811e+06 6.40465e+07 4.9848e+06 21931 3.16401e+07 0 0.168596 0.992117 0.731036 6.35417e+07 0.00361874 1.29824e+07 5.13165e+07 1.34964e+07 173 1.34456e+07 4.00961e+06 0.00310145 1.31769e+07 49.4954 0.0483728 0.994488 0 50.9706 GTEX-1E2YA-3026-SM-7IGO7 1 C1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 634 455 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994106 917491 0.939615 0.994908 0.811913 22224 1 76 0.00158403 264 0 7.65251e+07 0.0601824 5.92462e+06 7.69168e+07 2.69423e+06 22233 3.81228e+07 0 0.127702 0.994908 0.807779 7.65251e+07 0.00225291 1.61449e+07 4.2519e+07 1.67806e+07 310 1.6684e+07 6.12161e+06 0.0019182 1.62956e+07 49.4111 0.0770264 0.99571 0 50.9653 GTEX-1E2YA-3126-SM-9JGI6 1 C1 1 piece, mainly adenohypophysis (ensquared); 2x1mm nubbin of neurohypophysis delineated. Remainder is fibrous tissue 6.4 Pituitary Pituitary 0000007 635 455 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992708 610896 0.958162 0.993975 0.760865 27828 1 76 0.00203188 377 0 1.4495e+08 0.0415492 698686 1.45829e+08 7.51512e+06 27889 7.22301e+07 0 0.197296 0.993975 0.756281 1.4495e+08 0.0031011 3.08966e+07 2.19042e+07 3.13277e+07 367 3.13424e+07 2.25909e+07 0.00256581 3.10553e+07 49.7699 0.00479113 0.995241 0 50.3464 GTEX-1EH9U-0001-SM-7J3AD B1 Blood Whole Blood 0013756 669 BP-55198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/21/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1EH9U-0001-SM-7MA6P B1 Blood Whole Blood 0013756 669 BP-55198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/21/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1EH9U-0005-SM-ACKV3 B1 7.8 Blood Whole Blood 0013756 669 BP-55201 RNA isolation_PAXgene Blood RNA (Manual) 07/21/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.972699 460207 0.977234 0.974308 0.760162 18152 1 76 0.00304895 156 0 9.59295e+07 0.022084 604222 9.8459e+07 1.3381e+07 18168 4.77482e+07 0 0.217071 0.974308 0.740633 9.59295e+07 0.00416752 2.20413e+07 1.02885e+08 2.21432e+07 172 2.21807e+07 2.11175e+07 0.00360731 2.21654e+07 49.9827 0.00613679 0.975918 0 50.1153 GTEX-1EH9U-0011-R10a-SM-CJI2A B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 677 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991912 1.17148e+06 0.966996 0.993478 0.834972 23981 1 76 0.00207514 371 0 1.00244e+08 0.0326502 6.50233e+06 1.00902e+08 5.5855e+06 24000 4.98656e+07 0 0.132023 0.993478 0.829527 1.00244e+08 0.00241238 2.16951e+07 2.5281e+07 2.23468e+07 364 2.23498e+07 1.13765e+07 0.00224349 2.18182e+07 49.3983 0.0644423 0.995044 0 50.7399 GTEX-1EH9U-0011-R11b-SM-CE6R1 B1, A1 5.9 Brain Brain - Cerebellar Hemisphere 0002037 677 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.986706 543888 0.962395 0.988896 0.828695 19868 1 76 0.00795388 150 0 6.56458e+07 0.0375197 8.06198e+06 6.63829e+07 1.0257e+07 19880 3.26179e+07 0 0.133699 0.988896 0.819493 6.56458e+07 0.00795586 1.40558e+07 2.87182e+07 1.46452e+07 190 1.45415e+07 2.59673e+06 0.00795487 1.42466e+07 49.4877 0.121447 0.991086 0 51.0269 GTEX-1EH9U-0011-R1b-SM-CJI2B B1, A1 6.7 Brain Brain - Hippocampus 0001954 677 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992616 797657 0.967563 0.994111 0.846013 22306 1 76 0.00217076 371 0 9.34433e+07 0.0322523 9.50647e+06 9.39969e+07 5.25892e+06 22323 4.65168e+07 0 0.12155 0.994111 0.841031 9.34433e+07 0.00255395 2.00427e+07 3.22994e+07 2.12316e+07 387 2.09752e+07 6.97747e+06 0.00236207 2.04034e+07 49.3092 0.101136 0.995605 0 51.4402 GTEX-1EH9U-0011-R3b-SM-CL534 B1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 677 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992163 416969 0.966661 0.993667 0.845886 22382 1 76 0.00271626 381 0 1.0892e+08 0.033191 1.32794e+07 1.09614e+08 1.33356e+07 22399 5.42535e+07 0 0.120775 0.993667 0.840529 1.0892e+08 0.00388093 2.349e+07 2.56214e+07 2.49958e+07 383 2.43858e+07 7.90603e+06 0.00329771 2.41936e+07 49.8022 0.121147 0.995172 0 51.5528 GTEX-1EH9U-0011-R5a-SM-CJI2K B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 677 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.987511 797046 0.971848 0.988804 0.818127 21366 1 76 0.00221515 371 0 1.19162e+08 0.0280514 1.41251e+07 1.20511e+08 7.20932e+06 21380 5.93502e+07 0 0.153721 0.988804 0.808967 1.19162e+08 0.00255468 2.46802e+07 7.56409e+07 2.6649e+07 376 2.59305e+07 6.85671e+06 0.00238469 2.5477e+07 49.5589 0.11721 0.990098 0 51.9179 GTEX-1EH9U-0011-R6a-SM-CJI2C B1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 677 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990174 771281 0.972424 0.991986 0.835499 22225 1 76 0.00217323 368 0 1.02414e+08 0.0274434 1.19587e+07 1.03241e+08 6.27855e+06 22238 5.09535e+07 0 0.136926 0.991986 0.828803 1.02414e+08 0.00280144 2.1706e+07 4.78477e+07 2.29439e+07 411 2.25228e+07 6.7098e+06 0.00248676 2.22713e+07 49.7192 0.115832 0.993798 0 51.3862 GTEX-1EH9U-0011-R7a-SM-9QEGU B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 677 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990767 370772 0.973936 0.99378 0.854751 20949 1 76 0.00201722 369 0 1.01348e+08 0.0259393 1.15029e+07 1.01982e+08 4.83422e+06 20960 5.04417e+07 0 0.119185 0.99378 0.849434 1.01348e+08 0.00407477 2.20101e+07 3.82952e+07 2.26172e+07 332 2.22181e+07 5.92083e+06 0.00304288 2.26207e+07 50.449 0.112794 0.996793 0 50.6802 GTEX-1EH9U-0011-R9b-SM-9WG5T B1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 677 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.99182 450105 0.962907 0.994429 0.833696 23188 1 76 0.00257085 284 0 8.82371e+07 0.0367535 4.22057e+06 8.87314e+07 6.68305e+06 23210 4.39108e+07 0 0.129211 0.994429 0.829051 8.82371e+07 0.00366409 1.95004e+07 1.3416e+07 1.99547e+07 309 1.98231e+07 1.16395e+07 0.00311604 1.98469e+07 50.03 0.0475657 0.997038 0 50.5757 GTEX-1EH9U-0126-SM-7SB87 1 B1 6 pieces; well trimmed; 10% dermal fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 754 691 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6763 04/27/2015 TruSeq.v1 EXCLUDE 0.989947 353744 0.959193 0.992393 0.686555 25790 1 76 0.00278586 152 0 7.77333e+07 0.0405621 473688 7.83292e+07 8.78529e+06 25841 3.86579e+07 0 0.272638 0.992393 0.681332 7.77333e+07 0.0043063 1.69155e+07 1.18493e+07 1.7102e+07 152 1.71262e+07 1.16329e+07 0.00354421 1.70791e+07 49.9311 0.0060474 0.994838 0 50.2741 GTEX-1EH9U-0226-SM-7PBY8 1 B1 2 pieces; 5 & 10% fibrovascular content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 757 688 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989173 151254 0.972814 0.992519 0.791704 24371 1 76 0.00290153 283 0 9.71208e+07 0.0268819 685700 9.78529e+07 1.2864e+07 24401 4.8289e+07 0 0.18111 0.992519 0.785781 9.71208e+07 0.00453368 2.11887e+07 1.02693e+07 2.14659e+07 266 2.15315e+07 1.67661e+07 0.00371485 2.14289e+07 49.8806 0.00700746 0.995864 0 50.3249 GTEX-1EH9U-0326-SM-7P8S2 1 B1 3 pieces; 10, 5, & 2% fibrofatty content 8.2 Muscle Muscle - Skeletal 0011907 759 686 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.945937 321781 0.978844 0.970929 0.841829 21910 1 76 0.0040294 143 0 7.86662e+07 0.0209191 1.04664e+06 8.10216e+07 1.25863e+07 21921 3.82232e+07 0 0.137015 0.970929 0.817355 7.86662e+07 0.00787388 1.69832e+07 1.03305e+07 1.69877e+07 158 1.80176e+07 1.64515e+07 0.00590217 1.78872e+07 49.8183 0.0129181 0.99592 0 50.0066 GTEX-1EH9U-0426-SM-7PBY9 1 B1 2 pieces; 10% fibrofatty content, internal and external 6.7 Nerve Nerve - Tibial 0001323 761 684 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987764 163916 0.962708 0.991278 0.706534 24887 1 76 0.00308238 183 0 9.26351e+07 0.0370384 571069 9.34501e+07 1.28616e+07 24945 4.60246e+07 0 0.256174 0.991278 0.700372 9.26351e+07 0.00476572 2.02322e+07 9.1063e+06 2.04019e+07 200 2.04622e+07 1.29018e+07 0.00392107 2.04799e+07 50.0216 0.00611095 0.994793 0 50.2088 GTEX-1EH9U-0526-SM-7PBZ3 0 B1 2 pieces; no plaques; preserved endothelium; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 763 682 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989925 253277 0.975347 0.992971 0.823538 23651 1 76 0.00276898 384 0 1.15993e+08 0.0242475 410215 1.16814e+08 1.42573e+07 23675 5.76777e+07 0 0.15181 0.992971 0.817749 1.15993e+08 0.00459244 2.52268e+07 1.15476e+07 2.54664e+07 341 2.5518e+07 2.27523e+07 0.00367791 2.5513e+07 49.9951 0.00351171 0.996017 0 50.2364 GTEX-1EH9U-0626-SM-7PC33 1 B1 2 pieces; 20% fat & fibrous content 6.6 Heart Heart - Atrial Appendage 0006631 778 667 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989989 367729 0.980738 0.992014 0.824089 21792 1 76 0.00337977 265 0 1.00819e+08 0.0190928 4.78935e+06 1.0163e+08 1.49755e+07 21810 5.01451e+07 0 0.156649 0.992014 0.817508 1.00819e+08 0.00451508 2.20039e+07 1.70779e+07 2.20492e+07 318 2.2146e+07 1.19698e+07 0.00394627 2.20865e+07 49.9327 0.0471252 0.994039 0 50.0513 GTEX-1EH9U-0826-SM-7IGPT 1 B1 2 pieces; 10% fibrofatty content 6 Heart Heart - Left Ventricle 0006566 792 653 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.992002 148568 0.9859 0.992781 0.836468 18851 1 76 0.0020137 262 0 7.27669e+07 0.0140458 5.56703e+06 7.3296e+07 2.40722e+06 18856 3.62795e+07 0 0.149433 0.992781 0.83043 7.27669e+07 0.00267998 1.58781e+07 3.24878e+07 1.62421e+07 311 1.61633e+07 3.78352e+06 0.00234658 1.60149e+07 49.7695 0.0759526 0.993561 0 50.5666 GTEX-1EH9U-0926-SM-7EWF1 1 B1 2 pieces; 10% & 5% fibrofatty content 6.5 Thyroid Thyroid 0002046 796 649 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99065 142259 0.963902 0.992524 0.699051 23693 1 76 0.00254662 132 0 6.80781e+07 0.0358033 278506 6.85909e+07 5.94003e+06 23741 3.38862e+07 0 0.264851 0.992524 0.693825 6.80781e+07 0.0035477 1.4901e+07 7.2395e+06 1.49645e+07 141 1.50012e+07 9.41423e+06 0.00304622 1.49814e+07 49.9671 0.00406039 0.994398 0 50.1064 GTEX-1EH9U-1126-SM-7IGLU 1 B1 2 pieces; 5% macrosteatosis 6 Liver Liver 0001114 801 644 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993566 310217 0.972431 0.99436 0.839207 20489 1 76 0.00219282 202 0 7.84635e+07 0.0270281 1.56475e+06 7.89086e+07 4.82657e+06 20507 3.91065e+07 0 0.133224 0.99436 0.834474 7.84635e+07 0.00287075 1.69729e+07 1.63577e+07 1.73528e+07 218 1.73384e+07 1.23498e+07 0.00253152 1.70536e+07 49.5861 0.01983 0.995154 0 50.5533 GTEX-1EH9U-1326-SM-79OM3 1 B1 2 pieces; several large tissue holes 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 808 637 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.977373 201406 0.973657 0.98112 0.76783 23087 1 76 0.00500308 134 0 6.65929e+07 0.0260344 452010 6.78743e+07 1.54005e+07 23113 3.31128e+07 0 0.205827 0.98112 0.753334 6.65929e+07 0.00611804 1.46452e+07 9.54453e+06 1.47204e+07 139 1.47974e+07 1.11272e+07 0.00555843 1.48089e+07 50.0194 0.00665951 0.984867 0 50.1281 GTEX-1EH9U-1726-SM-7P8QK 2 B1 2 pieces; 50 & 10% fat 5.6 Adrenal Gland Adrenal Gland 0002369 844 601 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987913 698885 0.966989 0.99108 0.772816 23204 1 76 0.00310235 268 0 1.04811e+08 0.0327746 3.59504e+06 1.05754e+08 1.46514e+07 23247 5.20941e+07 0 0.194173 0.99108 0.765923 1.04811e+08 0.00471155 2.23423e+07 2.26029e+07 2.29042e+07 315 2.30488e+07 1.15746e+07 0.00390438 2.25012e+07 49.399 0.0339943 0.994247 0 50.621 GTEX-1EH9U-1826-SM-7P8QL 1 B1 2 pieces: 1 with nodular glandular hyperplasia, other all smooth muscle 5.6 Prostate Prostate 0002367 846 599 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.985255 168339 0.964401 0.987618 0.807275 23357 1 76 0.0030271 147 0 6.65466e+07 0.0353603 1.72133e+06 6.7381e+07 8.80115e+06 23376 3.30906e+07 0 0.157126 0.987618 0.797279 6.65466e+07 0.00451361 1.44695e+07 1.04401e+07 1.4729e+07 160 1.47284e+07 1.05698e+07 0.00376858 1.46253e+07 49.8244 0.0255463 0.98998 0 50.4444 GTEX-1EH9U-1926-SM-7P8QM 1 B1 5 pieces: 2 with 20 & 30% autolyzed mucosa & submucosa; ample muscle 5.7 Colon Colon - Sigmoid 0001159 848 597 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988904 246839 0.970372 0.991548 0.804746 23964 1 76 0.00272645 281 0 1.14216e+08 0.0293655 1.34092e+06 1.1519e+08 1.43421e+07 24003 5.68243e+07 0 0.165626 0.991548 0.797944 1.14216e+08 0.00443327 2.44458e+07 1.22098e+07 2.47195e+07 301 2.47924e+07 1.86703e+07 0.00357759 2.46509e+07 49.8569 0.011641 0.994192 0 50.2783 GTEX-1EH9U-2026-SM-7PBYS 2 B1 6 pieces; mucosa autolyzed, muscle intact 6.2 Colon Colon - Transverse 0001157 855 590 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985928 268179 0.969117 0.990532 0.829111 23849 1 76 0.00287823 377 0 1.08043e+08 0.0306246 1.3045e+06 1.09076e+08 1.53635e+07 23874 5.36181e+07 0 0.140005 0.990532 0.821262 1.08043e+08 0.00541945 2.28774e+07 1.17281e+07 2.31165e+07 355 2.31819e+07 1.68522e+07 0.00414293 2.32831e+07 50.109 0.0119595 0.995136 0 50.2599 GTEX-1EH9U-2226-SM-7PBXX 2 B1 6 pieces: mucosa =2; muscle = 1; 3 with ample mucosa & muscle, 2 mucosa only, 1 muscle only 6.3 Stomach Stomach 0000945 861 584 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988622 169588 0.964775 0.992016 0.770343 23791 1 76 0.00303608 206 0 9.00819e+07 0.0350189 1.45728e+06 9.08069e+07 1.202e+07 23819 4.47619e+07 0 0.194432 0.992016 0.764192 9.00819e+07 0.00493478 1.92644e+07 9.58825e+06 1.94711e+07 242 1.94866e+07 1.15412e+07 0.00398218 1.95419e+07 50.0707 0.0160481 0.995409 0 50.2668 GTEX-1EH9U-2326-SM-7P8P5 1 B1 6 pieces; well dissected muscle 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 863 582 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.985746 298943 0.966229 0.98765 0.785378 23595 1 76 0.00338011 271 0 8.57172e+07 0.0335734 2.25651e+06 8.6789e+07 1.13581e+07 23623 4.26403e+07 0 0.180851 0.98765 0.775678 8.57172e+07 0.00407525 1.84882e+07 9.75663e+06 1.9147e+07 257 1.91371e+07 9.92872e+06 0.00372701 1.86493e+07 49.3545 0.026 0.989555 0 50.8753 GTEX-1EH9U-2426-SM-7EWFG 1 B1 6 pieces; well dissected mucosa with prominent muscularis mucosae 6.4 Esophagus Esophagus - Mucosa 0006920 866 579 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99182 137676 0.973627 0.993739 0.801432 20922 1 76 0.00250314 120 0 5.78783e+07 0.0261237 872748 5.82429e+07 5.05411e+06 20938 2.88227e+07 0 0.172195 0.993739 0.796415 5.78783e+07 0.00369724 1.29311e+07 7.27585e+06 1.30649e+07 142 1.30786e+07 8.65119e+06 0.00309904 1.30235e+07 49.8944 0.0149846 0.995659 0 50.2573 GTEX-1EH9U-2526-SM-79OO5 1 B1 6 pieces; well dissected muscle 6.5 Esophagus Esophagus - Muscularis 0004648 867 578 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.990075 117267 0.966277 0.989911 0.783791 21755 1 76 0.00320789 122 0 5.83329e+07 0.033549 1.06263e+06 5.89274e+07 3.74154e+06 21777 2.90324e+07 0 0.182486 0.989911 0.775884 5.83329e+07 0.00445989 1.26292e+07 5.54491e+06 1.27972e+07 141 1.27679e+07 7.56294e+06 0.003834 1.26515e+07 49.771 0.0180328 0.989748 0 50.3304 GTEX-1EH9U-2626-SM-7IGQN 2 B1 2 pieces; spermatogenesis 5.9 Testis Testis 0000473 871 574 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446,LCSET-7011 04/01/2015 TruSeq.v1 RNASEQ 0.991828 43719 0.910823 0.991185 0.665153 27669 1 76 0.00702456 96 0 2.68518e+07 0.0888951 668292 2.70906e+07 5.76554e+06 27689 1.33821e+07 0 0.245669 0.991185 0.65929 2.68518e+07 0.00200122 5.32576e+06 4.07613e+06 5.72256e+06 92 5.70003e+06 3.21931e+06 0.00451126 5.33839e+06 48.3619 0.0246687 0.990542 0 51.7957 GTEX-1EH9U-2826-SM-7DUGT 1 B1 6 pieces; well trimmed; 5% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 876 569 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.991022 228598 0.973618 0.991783 0.768096 23613 1 76 0.00280074 188 0 8.43862e+07 0.0261203 470331 8.50854e+07 8.03706e+06 23659 4.19974e+07 0 0.205522 0.991783 0.761784 8.43862e+07 0.00425732 1.87019e+07 9.53239e+06 1.88032e+07 190 1.88566e+07 1.43599e+07 0.00352847 1.87172e+07 49.8145 0.00552775 0.992543 0 50.1351 GTEX-1EH9U-2926-SM-7DHLX 1 B1 2 pieces; well dissected salivary glands 8 Salivary Gland Minor Salivary Gland 0006330 878 567 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.988616 161077 0.973531 0.989712 0.795407 23717 1 76 0.00397262 180 0 7.70678e+07 0.0250497 278434 7.78689e+07 5.52875e+06 23741 3.83046e+07 0 0.178124 0.989712 0.787224 7.70678e+07 0.00564692 1.73294e+07 1.34765e+07 1.75387e+07 172 1.75965e+07 1.31542e+07 0.00480884 1.73496e+07 49.6467 0.00357568 0.990808 0 50.3002 GTEX-1EH9U-3126-SM-7MXU5 1 B1 2 pieces 5.7 Brain Brain - Cerebellum 0002037 939 506 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.984153 737560 0.939007 0.989619 0.776323 23442 1 76 0.00276267 269 0 9.47314e+07 0.0607628 5.97763e+06 9.57251e+07 9.59195e+06 23463 4.70152e+07 0 0.162685 0.989619 0.768264 9.47314e+07 0.0037498 1.99248e+07 5.3508e+07 2.03423e+07 303 2.03578e+07 6.9303e+06 0.00325351 2.03472e+07 49.9871 0.0624459 0.995086 0 50.5184 GTEX-1EH9U-3226-SM-7MKGR 1 B1 1 fragmented piece labeled; anterior is largest 5.9 Pituitary Pituitary 0000007 940 505 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979953 335261 0.959696 0.987131 0.760157 25861 1 76 0.00429043 161 0 7.82614e+07 0.0400617 774058 7.92816e+07 1.24646e+07 25898 3.8707e+07 0 0.199538 0.987131 0.750375 7.82614e+07 0.00497653 1.67533e+07 1.10249e+07 1.70785e+07 172 1.7322e+07 1.07321e+07 0.00463098 1.70375e+07 49.5861 0.0097634 0.994309 0 50.4807 GTEX-1EKGG-0001-SM-EAZCL B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 738 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99185 1.2359e+06 0.9667 0.992883 0.821351 21925 1 76 0.00241472 285 0 1.18189e+08 0.0316752 646507 1.19036e+08 8.72064e+06 21953 5.88267e+07 0 0.145349 0.992883 0.815506 1.18189e+08 0.00335061 2.63124e+07 1.88095e+07 2.64733e+07 288 2.65219e+07 2.78051e+07 0.00288218 2.63799e+07 49.8658 0.00543118 0.993917 0 50.1524 GTEX-1EKGG-0004-SM-DIND5 B1 Blood Whole Blood 0013756 738 BP-55198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/21/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1EKGG-0004-SM-DLIOP B1 Blood Whole Blood 0013756 738 BP-55198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/21/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1EKGG-0005-SM-AHZ1Z B1 7.7 Blood Whole Blood 0013756 738 BP-55201 RNA isolation_PAXgene Blood RNA (Manual) 07/21/2014 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.95077 391024 0.988313 0.952883 0.812192 18422 1 76 0.00195101 263 0 1.30552e+08 0.0108214 254485 1.37007e+08 5.98876e+06 18428 6.49333e+07 0 0.176121 0.952883 0.773924 1.30552e+08 0.00329976 3.12778e+07 2.51858e+08 3.1456e+07 270 3.15561e+07 3.7604e+07 0.00262389 3.14821e+07 49.9413 0.00185746 0.954997 0 50.142 GTEX-1EKGG-0011-R11a-SM-9QEHZ B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 782 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.98942 463326 0.951888 0.992548 0.789933 23455 1 76 0.00209658 270 0 9.57372e+07 0.0477451 2.05976e+06 9.6456e+07 4.75584e+06 23478 4.76076e+07 0 0.161955 0.992548 0.784047 9.57372e+07 0.0041652 2.0694e+07 1.4338e+07 2.08448e+07 299 2.09539e+07 1.12729e+07 0.00312763 2.08418e+07 49.8659 0.0213544 0.995676 0 50.1815 GTEX-1EKGG-0011-R1b-SM-9QEI1 B1, A1 6.2 Brain Brain - Hippocampus 0001954 782 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991602 303020 0.962836 0.994472 0.840996 22781 1 76 0.00210536 201 0 7.05054e+07 0.0369324 4.15152e+06 7.08973e+07 3.40312e+06 22798 3.50924e+07 0 0.121841 0.994472 0.836347 7.05054e+07 0.00412982 1.54556e+07 1.35643e+07 1.57383e+07 254 1.56984e+07 6.25079e+06 0.00311467 1.56572e+07 49.9344 0.0585569 0.997342 0 50.4531 GTEX-1EKGG-0011-R2a-SM-CE6R8 B1, A1 6.5 Brain Brain - Substantia nigra 0002038 782 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.9895 452668 0.970671 0.991095 0.851056 22767 1 76 0.00784093 161 0 7.64239e+07 0.0290628 5.75467e+06 7.71106e+07 1.1537e+07 22780 3.80227e+07 0 0.119615 0.991095 0.843477 7.64239e+07 0.00786503 1.67581e+07 1.62101e+07 1.70575e+07 199 1.69269e+07 7.80749e+06 0.00785296 1.69732e+07 50.0683 0.0746288 0.992691 0 50.4427 GTEX-1EKGG-0011-R5a-SM-9OSVQ B1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 782 BP-59480 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99142 489036 0.968603 0.993471 0.835449 23501 1 76 0.00279182 269 0 1.14052e+08 0.0311908 8.29238e+06 1.14801e+08 1.0219e+07 23521 5.67917e+07 0 0.133154 0.993471 0.829995 1.14052e+08 0.00391022 2.47946e+07 4.11413e+07 2.50871e+07 327 2.49185e+07 9.16747e+06 0.00334987 2.51437e+07 50.225 0.0722324 0.995522 0 50.2932 GTEX-1EKGG-0011-R6a-SM-CL538 B1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 782 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992026 1.178e+06 0.951942 0.994067 0.863118 22876 1 76 0.00281581 373 0 9.42083e+07 0.0476137 5.5566e+06 9.47705e+07 1.29557e+07 22893 4.68895e+07 0 0.088824 0.994067 0.857998 9.42083e+07 0.00393466 2.01334e+07 3.47355e+07 2.08542e+07 348 2.08015e+07 1.21968e+07 0.00337408 2.03826e+07 49.4914 0.0586321 0.996108 0 50.8792 GTEX-1EKGG-0011-R7a-SM-CKZNN B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 782 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992184 854397 0.958579 0.994495 0.857185 21722 1 76 0.00219939 371 0 8.30892e+07 0.0410926 5.82245e+06 8.35491e+07 7.44698e+06 21736 4.13683e+07 0 0.101394 0.994495 0.852466 8.30892e+07 0.00364278 1.78984e+07 3.04871e+07 1.84189e+07 333 1.83572e+07 8.70638e+06 0.00291941 1.81235e+07 49.6797 0.069689 0.996805 0 50.7165 GTEX-1EKGG-0011-R9a-SM-CMKFV B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 782 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995004 654715 0.960265 0.995972 0.864923 22779 1 76 0.00209907 394 0 1.04934e+08 0.039299 3.45881e+06 1.05359e+08 7.8613e+06 22794 5.23027e+07 0 0.095342 0.995972 0.861438 1.04934e+08 0.00256225 2.31393e+07 1.75689e+07 2.37248e+07 373 2.35094e+07 1.60284e+07 0.00233044 2.34603e+07 49.9478 0.032829 0.996939 0 50.6247 GTEX-1EKGG-0126-SM-9YFLS 0 B1 1 piece; not skin, adipose tissue with small portion of fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 849 1178 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.992389 273234 0.97308 0.993966 0.775968 23620 1 76 0.00270958 207 0 8.61615e+07 0.0266402 874053 8.66845e+07 5.01504e+06 23646 4.292e+07 0 0.197112 0.993966 0.771286 8.61615e+07 0.0036774 1.89731e+07 8.99964e+06 1.9127e+07 224 1.91113e+07 1.20165e+07 0.00319273 1.91154e+07 50.0053 0.0100831 0.995544 0 50.2019 GTEX-1EKGG-0226-SM-9WYTH 1 B1 1 piece; not adipose tissue, skin 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 848 1179 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992609 257303 0.97041 0.994245 0.769478 25878 1 76 0.00251861 293 0 1.0041e+08 0.0293557 607913 1.00991e+08 6.97522e+06 25923 5.00157e+07 0 0.200932 0.994245 0.76505 1.0041e+08 0.00458771 2.19066e+07 1.02520e+07 2.20892e+07 275 2.21205e+07 1.63495e+07 0.00355146 2.2029e+07 49.8964 0.00601947 0.995881 0 50.2076 GTEX-1EKGG-0326-SM-9WYTG 1 B1 2 pieces; well trimmed, sclerosis 8.2 Blood Vessel Artery - Tibial 0007610 851 1176 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99349 183030 0.971052 0.99471 0.796286 22714 1 76 0.00255599 278 0 9.8528e+07 0.0285425 387465 9.90519e+07 6.96501e+06 22746 4.90895e+07 0 0.174766 0.99471 0.792074 9.8528e+07 0.0041617 2.11118e+07 6.88152e+06 2.13242e+07 267 2.13057e+07 1.73369e+07 0.00335786 2.12409e+07 49.9239 0.00391174 0.99593 0 50.2503 GTEX-1EKGG-0526-SM-7P8SZ 1 B1 2 pieces; skeletal muscle with at least 10% internal fat (1 piece is incomplete section) 8.2 Muscle Muscle - Skeletal 0011907 854 1173 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 EXCLUDE 0.859329 1.11151e+07 0.541574 0.873105 0.304063 17708 1 76 0.00310556 67 0 8.80959e+07 0.453747 5.26556e+06 1.009e+08 1.2723e+07 17713 4.30923e+07 0 0.237511 0.873105 0.265479 8.80959e+07 0.00746309 9.52703e+06 5.21832e+08 1.07506e+07 86 1.10463e+07 4.43985e+06 0.00524995 1.00414e+07 47.6173 0.0521862 0.88688 0 53.017 GTEX-1EKGG-0626-SM-7DUGJ 1 B1 6 pieces; essentially well trimmed 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 930 1097 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.992374 238524 0.972587 0.99315 0.74936 24351 1 76 0.00292112 220 0 9.54209e+07 0.0271787 301850 9.6079e+07 8.57554e+06 24389 4.75284e+07 0 0.223227 0.99315 0.744227 9.54209e+07 0.00428739 2.09592e+07 1.06883e+07 2.10385e+07 231 2.1096e+07 1.46731e+07 0.00360372 2.09745e+07 49.8556 0.00314168 0.993925 0 50.0944 GTEX-1EKGG-0726-SM-7IGPX 2 B1 2 pieces 5.7 Thyroid Thyroid 0002046 933 1094 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.99374 263105 0.96752 0.994065 0.715943 24603 1 76 0.00217602 151 0 7.71428e+07 0.0322117 655805 7.76034e+07 3.10061e+06 24650 3.84277e+07 0 0.251577 0.994065 0.711694 7.71428e+07 0.00264916 1.68927e+07 7.41387e+06 1.70918e+07 172 1.70891e+07 1.00469e+07 0.00241251 1.69205e+07 49.7521 0.00845073 0.99439 0 50.293 GTEX-1EKGG-0826-SM-79OLL 1 B1 6 pieces; minimal atherosclerosis 7 Blood Vessel Artery - Aorta 0001496 935 1092 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975489 162175 0.972185 0.979325 0.796184 21316 1 76 0.00523278 117 0 5.67457e+07 0.0274099 109335 5.79437e+07 1.34038e+07 21330 2.82201e+07 0 0.176001 0.979325 0.779723 5.67457e+07 0.00643613 1.21667e+07 5.04999e+06 1.22291e+07 120 1.22825e+07 9.83771e+06 0.00583209 1.23186e+07 50.0735 0.00188692 0.983161 0 50.1278 GTEX-1EKGG-1026-SM-7RHG6 1 B1 2 pieces; calcific atherosclerosis with mild narrowing of the lumen, minimal attached fat 6.1 Blood Vessel Artery - Coronary 0001621 945 1082 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.988851 182228 0.967999 0.991476 0.715058 24364 1 76 0.0028284 162 0 8.94848e+07 0.031699 332939 9.02541e+07 9.05254e+06 24410 4.4478e+07 0 0.252942 0.991476 0.708963 8.94848e+07 0.00410238 1.92748e+07 6.8317e+06 1.94239e+07 196 1.944e+07 1.23828e+07 0.0034637 1.94857e+07 50.0588 0.00368891 0.994101 0 50.1927 GTEX-1EKGG-1126-SM-7MGXB 1 B1 2 pieces; focal hemorrhage 5.6 Heart Heart - Left Ventricle 0006566 947 1080 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992908 83374 0.988308 0.994715 0.883533 17995 1 76 0.00317103 190 0 5.81672e+07 0.0116272 4.3632e+06 5.84763e+07 4.32588e+06 17999 2.89948e+07 0 0.104775 0.994715 0.878864 5.81672e+07 0.00394923 1.30697e+07 1.35986e+07 1.32548e+07 204 1.31573e+07 2.90068e+06 0.00355943 1.32349e+07 50.147 0.0746149 0.996523 0 50.3516 GTEX-1EKGG-1226-SM-7IGNO 1 B1 2 pieces; congestion, mild steatosis 6.3 Liver Liver 0001114 948 1079 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.994045 362344 0.969169 0.995017 0.794716 21513 1 76 0.00235559 198 0 8.324e+07 0.0307001 1.23206e+06 8.36568e+07 4.89608e+06 21537 4.15053e+07 0 0.174453 0.995017 0.790757 8.324e+07 0.00312386 1.80189e+07 1.96964e+07 1.83678e+07 255 1.83691e+07 1.04447e+07 0.00273935 1.80879e+07 49.6143 0.0147275 0.99599 0 50.4794 GTEX-1EKGG-1326-SM-7MXUM 1 B1 2 pieces; congestion, hemorrhage, patchy inflammation 6.8 Lung Lung 0008952 950 1077 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.978209 179450 0.972814 0.98593 0.714164 24451 1 76 0.0032206 140 0 7.60994e+07 0.0267603 352360 7.71854e+07 1.02335e+07 24492 3.76219e+07 0 0.25865 0.98593 0.704116 7.60994e+07 0.00483375 1.67631e+07 9.74341e+06 1.68023e+07 160 1.7044e+07 1.00887e+07 0.00402086 1.70849e+07 50.06 0.00456511 0.993651 0 50.0585 GTEX-1EKGG-1426-SM-7PBY2 0 B1 2 pieces; mature adipose tissue 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 951 1076 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985933 215270 0.972213 0.990445 0.769073 24647 1 76 0.00323993 274 0 1.02357e+08 0.027532 834714 1.03345e+08 1.45375e+07 24685 5.08038e+07 0 0.203139 0.990445 0.761725 1.02357e+08 0.00516172 2.23804e+07 1.0857e+07 2.27236e+07 291 2.2824e+07 1.32774e+07 0.00419645 2.27124e+07 49.8775 0.008077 0.994956 0 50.3805 GTEX-1EKGG-1726-SM-7MXUP 1 B1 6 pieces 6.8 Esophagus Esophagus - Mucosa 0006920 959 1068 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757,LCSET-7087 04/25/2015 TruSeq.v1 RNASEQ 0.988875 215711 0.975895 0.992532 0.814838 23564 1 76 0.0028893 274 0 1.14106e+08 0.0238529 886125 1.14965e+08 1.29005e+07 23584 5.6744e+07 0 0.161057 0.992532 0.808754 1.14106e+08 0.00390572 2.5397e+07 1.46289e+07 2.55774e+07 322 2.57097e+07 1.83061e+07 0.00339564 2.56603e+07 49.9519 0.00770779 0.99619 0 50.177 GTEX-1EKGG-2126-SM-7MKFT 2 B1 2 pieces; small portion of residual attached fat (5-10%), cortex and medulla 5.9 Adrenal Gland Adrenal Gland 0002369 971 1056 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982599 282526 0.972689 0.988483 0.807918 22741 1 76 0.00449888 194 0 7.98607e+07 0.0270826 4.15696e+06 8.07912e+07 1.23301e+07 22766 3.95365e+07 0 0.164771 0.988483 0.798614 7.98607e+07 0.00584849 1.74141e+07 1.15634e+07 1.75781e+07 209 1.77756e+07 8.31484e+06 0.00516967 1.76369e+07 49.8041 0.0514532 0.994367 0 50.2343 GTEX-1EKGG-2226-SM-7IGOA 2 B1 6 pieces; glomeruli in all sections, some sclerotic 6 Kidney Kidney - Cortex 0001225 974 1053 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.995323 171920 0.976208 0.99571 0.80818 22305 1 76 0.00227153 125 0 5.7852e+07 0.0235793 1.96433e+06 5.81013e+07 2.05163e+06 22320 2.88349e+07 0 0.168029 0.99571 0.804713 5.7852e+07 0.00276826 1.28556e+07 9.89697e+06 1.30868e+07 156 1.31301e+07 6.0221e+06 0.00251979 1.28343e+07 49.4305 0.0338088 0.996097 0 50.4455 GTEX-1EKGG-2626-SM-7IGPY 1 B1 2 pieces; 80-90% fat with some fibrous stroma/nerves 5.9 Breast Breast - Mammary Tissue 0008367 996 1031 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994671 144442 0.975298 0.994962 0.789762 22177 1 76 0.00214865 132 0 6.37924e+07 0.0243963 728535 6.41153e+07 2.20284e+06 22196 3.1805e+07 0 0.185536 0.994962 0.785784 6.37924e+07 0.00256239 1.40197e+07 7.81049e+06 1.42205e+07 155 1.41962e+07 9.22013e+06 0.00235546 1.40606e+07 49.7601 0.0113629 0.995254 0 50.3555 GTEX-1EKGG-2726-SM-79OOD 1 B1 2 pieces; spermatogenesis is present 6.5 Testis Testis 0000473 1000 1027 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.991467 232902 0.919406 0.991859 0.691533 32758 1 76 0.00325666 134 0 6.51421e+07 0.0803015 591541 6.56768e+07 3.65193e+06 32820 3.24568e+07 0 0.227873 0.991859 0.685904 6.51421e+07 0.00449171 1.34037e+07 8.99207e+06 1.34736e+07 124 1.35114e+07 9.60452e+06 0.00387394 1.33868e+07 49.7685 0.00900685 0.992252 0 50.1301 GTEX-1EKGG-2826-SM-7MGXA 2 B1 2 pieces; fibromuscular stroma and glands with significant sloughing, nodular glandular hyperplasia 5.7 Prostate Prostate 0002367 1002 1025 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991216 115707 0.966995 0.993 0.773975 24093 1 76 0.00299855 126 0 6.10776e+07 0.0328238 1.3788e+06 6.15081e+07 4.65406e+06 24114 3.04197e+07 0 0.193019 0.993 0.768558 6.10776e+07 0.00387304 1.34847e+07 7.16255e+06 1.36636e+07 149 1.3626e+07 6.7997e+06 0.00343501 1.36254e+07 49.9988 0.0224165 0.994784 0 50.3294 GTEX-1EKGG-2926-SM-7EPIH 1 B1 2 pieces 6.9 Brain Brain - Cortex 0001870 1028 999 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.992145 211209 0.969567 0.994411 0.823482 25148 1 76 0.00325655 198 0 1.0105e+08 0.0300832 3.47437e+06 1.01618e+08 1.3796e+07 25177 5.03526e+07 0 0.146085 0.994411 0.81888 1.0105e+08 0.0113432 2.20816e+07 1.63249e+07 2.25389e+07 205 2.24967e+07 1.227e+07 0.00729066 2.23173e+07 49.7999 0.0341905 0.996678 0 50.5125 GTEX-1EKGG-3026-SM-7MKFU 1 B1 1 piece; adenohypophysis and neurohypophysis, small portion of attached fat (~5%) 6.8 Pituitary Pituitary 0000007 1029 998 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982863 346811 0.962889 0.9889 0.77044 25849 1 76 0.00428043 161 0 8.19838e+07 0.0368367 477039 8.29041e+07 1.31928e+07 25889 4.05981e+07 0 0.192449 0.9889 0.761888 8.19838e+07 0.00510135 1.70921e+07 1.04339e+07 1.74543e+07 177 1.76744e+07 1.2829e+07 0.00468838 1.73304e+07 49.5087 0.00575411 0.994937 0 50.5243 GTEX-1EKGG-3126-SM-9WPO5 1 B1 2 pieces; mild to moderate autolysis, residual attached mininges, Purkinje cells well visualized 6.5 Brain Brain - Cerebellum 0002037 1033 994 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987378 308769 0.944871 0.988978 0.720841 23677 1 76 0.00655511 126 0 7.25734e+07 0.0548492 1.32861e+06 7.33822e+07 1.07749e+07 23708 3.6121e+07 0 0.22403 0.988978 0.712896 7.25734e+07 0.00683205 1.56435e+07 1.47556e+07 1.57961e+07 145 1.58078e+07 7.7698e+06 0.00669336 1.57322e+07 49.8802 0.0181053 0.990579 0 50.2428 GTEX-1EMGI-0001-SM-EAZCK B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 352 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.991873 659247 0.972534 0.992858 0.821537 21256 1 76 0.00250573 285 0 1.1333e+08 0.0265291 408388 1.14145e+08 8.45680e+06 21295 5.64367e+07 0 0.150998 0.992858 0.81567 1.1333e+08 0.00330635 2.53866e+07 1.30179e+07 2.54888e+07 275 2.55331e+07 2.71453e+07 0.00290564 2.54491e+07 49.9177 0.0035778 0.993843 0 50.1004 GTEX-1EMGI-0004-SM-DINCE B1 Blood Whole Blood 0013756 352 BP-55299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1EMGI-0004-SM-DLIOK B1 Blood Whole Blood 0013756 352 BP-55299 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1EMGI-0006-SM-ACKVA B1 7.7 Blood Whole Blood 0013756 352 BP-55298 RNA isolation_PAXgene Blood RNA (Manual) 07/23/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.97091 541063 0.977218 0.972597 0.812597 19870 1 76 0.00291649 155 0 1.02145e+08 0.0213942 254394 1.05023e+08 1.32296e+07 19882 5.08142e+07 0 0.164621 0.972597 0.79033 1.02145e+08 0.00471855 2.3676e+07 1.31883e+08 2.37191e+07 187 2.3719e+07 2.58907e+07 0.00381596 2.38672e+07 50.1557 0.00242227 0.974285 0 50.0454 GTEX-1EMGI-0011-R10a-SM-9OSWY B1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 365 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992017 270807 0.966058 0.994327 0.858351 23014 1 76 0.00288706 199 0 7.30402e+07 0.0334317 2.00074e+06 7.34569e+07 6.7804e+06 23027 3.63505e+07 0 0.107708 0.994327 0.853482 7.30402e+07 0.00423119 1.5967e+07 9.91537e+06 1.61729e+07 219 1.61784e+07 9.92283e+06 0.00355757 1.61029e+07 49.883 0.0272369 0.996637 0 50.3203 GTEX-1EMGI-0011-R11b-SM-9OSWX B1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 365 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.9906 394132 0.951369 0.992884 0.775249 24286 1 76 0.00292699 276 0 1.0361e+08 0.0482237 960505 1.04353e+08 1.01681e+07 24319 5.15493e+07 0 0.17612 0.992884 0.769733 1.0361e+08 0.00387696 2.24297e+07 2.39918e+07 2.27002e+07 293 2.27881e+07 1.27895e+07 0.00340088 2.25599e+07 49.7484 0.00920442 0.995169 0 50.2998 GTEX-1EMGI-0011-R1b-SM-9OSWZ B1, A1 7.8 Brain Brain - Hippocampus 0001954 365 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989929 417673 0.965467 0.993091 0.849743 24425 1 76 0.00305037 272 0 9.84228e+07 0.0341558 3.18181e+06 9.91075e+07 9.82474e+06 24444 4.89464e+07 0 0.115724 0.993091 0.843873 9.84228e+07 0.00388996 2.14558e+07 1.71002e+07 2.17992e+07 304 2.18447e+07 1.18871e+07 0.00346883 2.16852e+07 49.8169 0.0321047 0.996254 0 50.3969 GTEX-1EMGI-0011-R2b-SM-9OSVS B1, A1 5.8 Brain Brain - Substantia nigra 0002038 365 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989543 431241 0.968435 0.992708 0.865379 24220 1 76 0.00326948 277 0 1.1077e+08 0.031272 5.17971e+06 1.11584e+08 1.10977e+07 24240 5.50926e+07 0 0.103056 0.992708 0.859068 1.1077e+08 0.00411434 2.4234e+07 1.94751e+07 2.47622e+07 318 2.47507e+07 1.30237e+07 0.00369056 2.45488e+07 49.7952 0.04642 0.995873 0 50.539 GTEX-1EMGI-0011-R3b-SM-CE6R9 B1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989775 680666 0.96606 0.99104 0.84596 24654 1 76 0.00842191 201 0 9.59141e+07 0.033356 3.62744e+06 9.67813e+07 1.54711e+07 24673 4.77099e+07 0 0.1201 0.99104 0.83838 9.59141e+07 0.00746079 2.1018e+07 1.6933e+07 2.11988e+07 250 2.13381e+07 1.34165e+07 0.00794196 2.09858e+07 49.5839 0.0374808 0.992304 0 50.2141 GTEX-1EMGI-0011-R4b-SM-CJI2D B1, A1 7.3 Brain Brain - Amygdala 0001876 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991307 771321 0.9515 0.992532 0.824076 23033 1 76 0.00252745 136 0 6.34414e+07 0.0480578 3.0062e+06 6.39187e+07 3.82897e+06 23052 3.15979e+07 0 0.127423 0.992532 0.817922 6.34414e+07 0.00296664 1.36435e+07 2.0536e+07 1.39266e+07 162 1.39557e+07 8.31396e+06 0.00274678 1.36957e+07 49.5297 0.0470315 0.993757 0 50.5134 GTEX-1EMGI-0011-R5a-SM-CJI2E B1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 365 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993292 1.17526e+06 0.957242 0.994606 0.824266 24965 1 76 0.00244914 373 0 1.05042e+08 0.0421768 3.09414e+06 1.05612e+08 6.5283e+06 24991 5.22871e+07 0 0.132977 0.994606 0.819819 1.05042e+08 0.00296599 2.27267e+07 2.60184e+07 2.30749e+07 333 2.32323e+07 1.51998e+07 0.00270723 2.26947e+07 49.4147 0.0292973 0.99592 0 50.3801 GTEX-1EMGI-0011-R6a-SM-9OSVR B1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 365 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992112 553077 0.964917 0.994227 0.843851 25037 1 76 0.00302307 273 0 1.11112e+08 0.0346386 5.07592e+06 1.11757e+08 1.03183e+07 25059 5.53051e+07 0 0.121066 0.994227 0.838979 1.11112e+08 0.00411421 2.4388e+07 2.17703e+07 2.44324e+07 315 2.45743e+07 1.47472e+07 0.00356748 2.44529e+07 49.8762 0.0454194 0.996341 0 50.0455 GTEX-1EMGI-0011-R7b-SM-9QEH5 B1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 365 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990808 528141 0.96167 0.993805 0.848105 23401 1 76 0.00248984 270 0 9.50773e+07 0.0380157 3.72048e+06 9.567e+07 4.52979e+06 23418 4.73076e+07 0 0.113565 0.993805 0.842851 9.50773e+07 0.00450759 2.06289e+07 2.417e+07 2.09034e+07 309 2.09337e+07 1.05484e+07 0.00349567 2.0838e+07 49.8855 0.0388887 0.996801 0 50.3304 GTEX-1EMGI-0011-R8b-SM-9QEID B1, A1 7.1 Brain Brain - Hypothalamus 0001898 365 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990108 307602 0.960428 0.993341 0.83873 23196 1 76 0.00235065 159 0 6.2289e+07 0.0392345 2.39263e+06 6.27065e+07 3.14846e+06 23211 3.09769e+07 0 0.121699 0.993341 0.833145 6.2289e+07 0.00454233 1.36335e+07 9.13335e+06 1.38001e+07 165 1.38234e+07 7.935e+06 0.00344292 1.37889e+07 49.9375 0.0381559 0.996574 0 50.3037 GTEX-1EMGI-0126-SM-9KNUE 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 499 1046 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993686 227103 0.977029 0.99488 0.848864 23027 1 76 0.00280921 251 0 9.09824e+07 0.0225355 279730 9.14506e+07 1.07513e+07 23049 4.53397e+07 0 0.128166 0.99488 0.844517 9.09824e+07 0.00391103 1.96277e+07 1.23661e+07 1.97708e+07 249 1.98041e+07 1.80775e+07 0.00335946 1.96959e+07 49.8631 0.00305881 0.996073 0 50.1817 GTEX-1EMGI-0226-SM-9MQL1 0 B1 2 pieces, ~10% fascia/peripheral nerve elements, rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 500 1045 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.987522 568082 0.960173 0.989827 0.766998 23662 1 76 0.00411688 178 0 8.76311e+07 0.0395058 574440 8.85317e+07 7.27918e+06 23688 4.35891e+07 0 0.193175 0.989827 0.759195 8.76311e+07 0.00524593 1.8894e+07 1.98015e+07 1.91473e+07 193 1.91836e+07 1.3775e+07 0.00468009 1.90538e+07 49.8302 0.00648852 0.992131 0 50.3329 GTEX-1EMGI-0326-SM-9MQM5 0 B1 2 pieces, ~5 - 10% tendon (insertiion site), delineated 7.8 Muscle Muscle - Skeletal 0011907 501 1044 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986757 369766 0.985006 0.988826 0.875107 19395 1 76 0.00569736 129 0 7.68471e+07 0.0147397 542503 7.77155e+07 9.06010e+06 19406 3.8254e+07 0 0.109899 0.988826 0.865329 7.68471e+07 0.00725952 1.64472e+07 7.73004e+06 1.67743e+07 149 1.67964e+07 1.64064e+07 0.00647681 1.65618e+07 49.6482 0.00698063 0.990895 0 50.4923 GTEX-1EMGI-0426-SM-7P8TR 0 B1 2 pieces, variable peripheral rim adherent fibrous tissue up to ~1mm. 7.3 Blood Vessel Artery - Tibial 0007610 502 1043 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.933903 317707 0.974775 0.964497 0.854703 22560 1 76 0.00398762 172 0 8.42814e+07 0.0249311 201738 8.73837e+07 1.26581e+07 22571 4.06714e+07 0 0.120073 0.964497 0.824358 8.42814e+07 0.00885227 1.73306e+07 9.20076e+06 1.74768e+07 184 1.86665e+07 1.60624e+07 0.00634279 1.85898e+07 49.897 0.00230864 0.995091 0 50.2101 GTEX-1EMGI-0526-SM-9YFM3 0 B1 2 pieces, no adherent fat 7.9 Nerve Nerve - Tibial 0001323 503 1042 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992788 368370 0.970145 0.994052 0.741622 25492 1 76 0.00265897 282 0 1.17343e+08 0.0294989 214390 1.18045e+08 4.15759e+06 25556 5.84552e+07 0 0.228523 0.994052 0.73721 1.17343e+08 0.00373525 2.58953e+07 9.54433e+06 2.60469e+07 311 2.6095e+07 1.88084e+07 0.00319642 2.59898e+07 49.899 0.00181617 0.995316 0 50.1459 GTEX-1EMGI-0626-SM-7MXUS 1 B1 2 pieces, spermatogenesis present, slightly reduced 6.5 Testis Testis 0000473 537 1008 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975768 200529 0.935347 0.985403 0.735429 32267 1 76 0.00320932 126 0 6.94743e+07 0.0642893 548106 7.05034e+07 1.10088e+07 32320 3.43303e+07 0 0.199918 0.985403 0.724695 6.94743e+07 0.00433897 1.44558e+07 9.68742e+06 1.4487e+07 131 1.47861e+07 1.18998e+07 0.00376862 1.47515e+07 49.9414 0.00777417 0.995039 0 50.054 GTEX-1EMGI-0726-SM-7PBZ4 1 B1 2 pieces, ~5-10% fascia/vascular elements; rep delineated 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 544 1001 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986481 257203 0.976165 0.990326 0.778115 25114 1 76 0.003187 278 0 1.13898e+08 0.0234593 289263 1.15011e+08 1.63515e+07 25153 5.6574e+07 0 0.198051 0.990326 0.770587 1.13898e+08 0.00491336 2.50335e+07 1.25357e+07 2.53207e+07 308 2.54569e+07 1.96248e+07 0.00404683 2.53213e+07 49.8665 0.00251509 0.994171 0 50.2852 GTEX-1EMGI-0826-SM-7EPHY 1 B1 2 pieces, no abnormalities 6.9 Thyroid Thyroid 0002046 546 999 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.989834 224757 0.970798 0.99235 0.730073 24563 1 76 0.00334064 120 0 8.4152e+07 0.0288637 126015 8.48006e+07 1.16829e+07 24610 4.18939e+07 0 0.240725 0.99235 0.724489 8.4152e+07 0.0119019 1.84744e+07 8.72963e+06 1.85937e+07 130 1.86755e+07 1.37155e+07 0.00761041 1.85911e+07 49.8867 0.00148601 0.994867 0 50.1609 GTEX-1EMGI-0926-SM-7IGPV 1 B1 6 pieces, minimal atherosis 6 Blood Vessel Artery - Aorta 0001496 553 992 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993319 209936 0.972953 0.993581 0.732539 22884 1 76 0.00232415 141 0 7.47482e+07 0.0266851 216497 7.52311e+07 3.05873e+06 22913 3.72141e+07 0 0.240414 0.993581 0.727837 7.47482e+07 0.00284459 1.63347e+07 6.51782e+06 1.64548e+07 164 1.64581e+07 1.10053e+07 0.00258431 1.63561e+07 49.8445 0.00287776 0.993843 0 50.1832 GTEX-1EMGI-1126-SM-9KNUF 1 B1 2 pieces, no abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 560 985 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994581 200521 0.983242 0.995521 0.8342 22016 1 76 0.00338249 270 0 1.05623e+08 0.016546 3.35522e+06 1.06098e+08 1.19564e+07 22038 5.26699e+07 0 0.149042 0.995521 0.830464 1.05623e+08 0.00404838 2.28461e+07 2.18332e+07 2.32892e+07 300 2.32265e+07 1.33228e+07 0.00371512 2.29847e+07 49.7384 0.0316239 0.99646 0 50.4802 GTEX-1EMGI-1226-SM-793DD 1 B1 2 pieces, trace interstitial fibrosis/chronic ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 560 985 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993937 326059 0.980176 0.995281 0.82466 21032 1 76 0.0033343 122 0 6.62265e+07 0.0195859 1.33277e+06 6.65405e+07 9.46517e+06 21050 3.29913e+07 0 0.155516 0.995281 0.820769 6.62265e+07 0.00393339 1.47289e+07 6.45075e+06 1.47587e+07 149 1.48317e+07 1.08596e+07 0.00363344 1.47376e+07 49.8408 0.0200294 0.996626 0 50.0504 GTEX-1EMGI-1426-SM-7IGNQ 1 B1 2 pieces, moderate-severe alveolar congestion 6.2 Lung Lung 0008952 564 981 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.990759 220236 0.973851 0.991491 0.77792 22749 1 76 0.0025066 154 0 7.41132e+07 0.0256611 233276 7.47493e+07 4.82861e+06 22773 3.69211e+07 0 0.19593 0.991491 0.771301 7.41132e+07 0.00309544 1.63478e+07 7.90217e+06 1.6491e+07 171 1.64762e+07 1.17205e+07 0.0028008 1.64174e+07 49.9107 0.00312078 0.992224 0 50.2181 GTEX-1EMGI-1926-SM-7938Y 1 B1 6 pieces, sqaumous mucosa 0.3-0.4mm thick, ~20% total thickness 8.7 Esophagus Esophagus - Mucosa 0006920 581 964 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376 01/14/2015 TruSeq.v1 RNASEQ 0.993281 338672 0.978504 0.993747 0.732999 20890 1 76 0.00219561 123 0 5.23591e+07 0.0211933 107550 5.26885e+07 2.48099e+06 20915 2.6046e+07 0 0.245505 0.993747 0.728416 5.23591e+07 0.00266971 1.19644e+07 5.61114e+06 1.18865e+07 123 1.20006e+07 9.32003e+06 0.00243255 1.18765e+07 49.7401 0.00204124 0.994214 0 49.8367 GTEX-1EMGI-2026-SM-7RHH3 1 B1 6 pieces, confirmed target muscularis 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 576 969 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991927 128242 0.973959 0.993899 0.784228 23235 1 76 0.0027552 208 0 8.91648e+07 0.0257847 841660 8.97122e+07 8.18686e+06 23259 4.43773e+07 0 0.189731 0.993899 0.779444 8.91648e+07 0.00431411 1.93205e+07 7.64866e+06 1.94881e+07 225 1.94764e+07 1.30362e+07 0.00353311 1.94978e+07 50.0274 0.00938178 0.99587 0 50.2159 GTEX-1EMGI-2126-SM-7P8S3 1 B1 6 pieces, confirmed target muscularis 6.7 Esophagus Esophagus - Muscularis 0004648 583 962 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.92795 266862 0.972322 0.961276 0.820582 23579 1 76 0.00448474 137 0 7.35886e+07 0.0274048 699632 7.6553e+07 1.18491e+07 23594 3.5396e+07 0 0.15174 0.961276 0.788806 7.35886e+07 0.00932877 1.52683e+07 8.01216e+06 1.52766e+07 151 1.6482e+07 1.19387e+07 0.00682279 1.64076e+07 49.8869 0.00913918 0.994603 0 50.0135 GTEX-1EMGI-2326-SM-7PBYA 0 B1 6 pieces, no adherent dermal fat, squamous epithelium is ~50 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 586 959 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.983986 147295 0.974201 0.989189 0.791004 22675 1 76 0.00334291 173 0 7.94845e+07 0.0256146 410574 8.03531e+07 1.15332e+07 22697 3.94299e+07 0 0.183197 0.989189 0.782453 7.94845e+07 0.00582791 1.73334e+07 1.06314e+07 1.75653e+07 188 1.76458e+07 1.08041e+07 0.00457887 1.76427e+07 49.9956 0.00510962 0.994393 0 50.3323 GTEX-1EMGI-2626-SM-7IGNR 1 B1 6 pieces, confirmed target muscularis 6.2 Colon Colon - Sigmoid 0001159 597 948 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.993492 449538 0.972271 0.994398 0.805143 24690 1 76 0.00227175 378 0 1.16252e+08 0.0274373 1.01889e+06 1.16907e+08 7.26163e+06 24726 5.79014e+07 0 0.167128 0.994398 0.800633 1.16252e+08 0.00312045 2.50186e+07 1.19428e+07 2.53362e+07 361 2.52753e+07 1.86597e+07 0.00269571 2.51901e+07 49.9156 0.00871541 0.995305 0 50.3153 GTEX-1EMGI-2726-SM-7P8S4 3 B1 6 pieces, target mucusa with advanced autolysis, largely sloughed 5.9 Colon Colon - Transverse 0001157 598 947 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.92501 226353 0.970502 0.958981 0.811425 23959 1 76 0.00485169 130 0 6.77883e+07 0.0292157 838725 7.06879e+07 1.20379e+07 23982 3.25661e+07 0 0.159078 0.958981 0.778141 6.77883e+07 0.00941586 1.41586e+07 8.98055e+06 1.42466e+07 140 1.53984e+07 1.07953e+07 0.00705293 1.52651e+07 49.7825 0.0118652 0.992951 0 50.1549 GTEX-1EMGI-2826-SM-7IGMR 3 B1 6 piecesm glandular mucosa sloughed/autolyzed; ~20% residual target lymphoid aggregates; rep. delineated 6.1 Small Intestine Small Intestine - Terminal Ileum 0001211 602 943 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.991083 386943 0.966085 0.991703 0.756389 27097 1 76 0.00245502 385 0 1.43748e+08 0.0333013 379321 1.44951e+08 8.52393e+06 27152 7.15874e+07 0 0.209696 0.991703 0.750113 1.43748e+08 0.00306081 3.14967e+07 2.23475e+07 3.17546e+07 360 3.17278e+07 2.52009e+07 0.00275772 3.16285e+07 49.9216 0.00261689 0.992323 0 50.2039 GTEX-1EMGI-2926-SM-7DUEJ 1 B1 1 piece; ~70% adenohypophysis, 30% (delineated) neurohypophysis, ~7x4mm 7.5 Pituitary Pituitary 0000007 628 917 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.993082 306410 0.969008 0.993956 0.771431 25572 1 76 0.0029408 271 0 1.02955e+08 0.0307013 222256 1.03581e+08 8.8469e+06 25617 5.12897e+07 0 0.197577 0.993956 0.766768 1.02955e+08 0.00440689 2.27879e+07 1.12803e+07 2.28656e+07 294 2.29656e+07 1.65072e+07 0.0036732 2.27774e+07 49.7942 0.00214572 0.994831 0 50.0851 GTEX-1EMGI-3026-SM-7P8P6 1 B1 2 pieces, no abnormalities 7.1 Brain Brain - Cortex 0001870 628 917 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.98771 377657 0.970561 0.990096 0.850083 24144 1 76 0.00341572 270 0 9.9132e+07 0.0289906 2.71884e+06 1.00124e+08 1.39775e+07 24169 4.93234e+07 0 0.120478 0.990096 0.841663 9.9132e+07 0.00440476 2.18031e+07 1.33826e+07 2.1998e+07 262 2.21138e+07 1.33691e+07 0.00390905 2.18897e+07 49.7453 0.0271548 0.992482 0 50.2225 GTEX-1EMGI-3126-SM-7MXUR 1 B1 2 pieces, no abnormalities 6.1 Brain Brain - Cerebellum 0002037 629 916 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975714 179287 0.95401 0.985485 0.758299 23783 1 76 0.00338646 157 0 7.4046e+07 0.0456183 875417 7.51366e+07 1.17132e+07 23813 3.65749e+07 0 0.195711 0.985485 0.747293 7.4046e+07 0.00443776 1.60334e+07 1.4813e+07 1.60661e+07 179 1.63792e+07 9.17834e+06 0.0039069 1.63898e+07 50.0161 0.011651 0.995257 0 50.0509 GTEX-1EN7A-0006-SM-AHZ4O C1 8.5 Blood Whole Blood 0013756 826 BP-55298 RNA isolation_PAXgene Blood RNA (Manual) 07/23/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.980247 234412 0.982066 0.981525 0.777388 17977 1 76 0.00680442 96 0 5.68961e+07 0.0171689 124586 5.79671e+07 1.00418e+07 17985 2.83091e+07 0 0.204678 0.981525 0.763025 5.68961e+07 0.00859903 1.31134e+07 5.90164e+07 1.32342e+07 104 1.32196e+07 1.28225e+07 0.00770056 1.32062e+07 49.9745 0.00214926 0.982803 0 50.2293 GTEX-1EN7A-0011-R3a-SM-9OSVT C1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 862 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989996 404663 0.973129 0.992796 0.844714 22348 1 76 0.00207907 368 0 1.13603e+08 0.026719 1.1451e+07 1.14428e+08 9.96395e+06 22359 5.65496e+07 0 0.128415 0.992796 0.838629 1.13603e+08 0.00288806 2.43915e+07 4.49523e+07 2.52951e+07 335 2.48507e+07 7.04429e+06 0.00248242 2.50591e+07 50.2088 0.100072 0.995595 0 50.9092 GTEX-1EN7A-0011-R5a-SM-9QEH6 C1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 862 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989492 310200 0.974323 0.992675 0.840167 20719 1 76 0.00140988 368 0 8.97378e+07 0.0255931 8.1712e+06 9.04e+07 4.54083e+06 20727 4.46671e+07 0 0.134157 0.992675 0.834012 8.97378e+07 0.00338302 1.93249e+07 4.00649e+07 1.9865e+07 331 1.95799e+07 4.31554e+06 0.00239329 1.98137e+07 50.2968 0.0903894 0.995858 0 50.6892 GTEX-1EN7A-0011-R6b-SM-9QEHW C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 862 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990546 199784 0.977628 0.993659 0.860214 20258 1 76 0.00141966 366 0 7.55738e+07 0.0222654 9.28684e+06 7.6056e+07 3.60929e+06 20267 3.76108e+07 0 0.117414 0.993659 0.85476 7.55738e+07 0.00354525 1.6546e+07 2.19133e+07 1.70275e+07 349 1.67662e+07 3.58009e+06 0.00247912 1.69576e+07 50.2838 0.122105 0.996773 0 50.7171 GTEX-1EN7A-0011-R7b-SM-9QEHX C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 862 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989658 318776 0.973997 0.992904 0.848661 20093 1 76 0.00140419 371 0 9.26753e+07 0.0259312 9.19488e+06 9.33376e+07 4.52008e+06 20101 4.61248e+07 0 0.125336 0.992904 0.842639 9.26753e+07 0.00340906 1.98709e+07 3.87714e+07 2.07916e+07 349 2.0312e+07 4.23496e+06 0.00240334 2.053e+07 50.2669 0.0985121 0.996151 0 51.1321 GTEX-1EN7A-0126-SM-7SB81 0 C1 6 pieces; well trimmed; 5% dermal fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 985 1075 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990137 455106 0.952444 0.99231 0.623242 26616 1 76 0.00285621 191 0 9.26143e+07 0.0473731 288044 9.33319e+07 1.0469e+07 26693 4.60762e+07 0 0.329202 0.99231 0.618449 9.26143e+07 0.00393854 1.98794e+07 1.34806e+07 2.00548e+07 165 2.01299e+07 1.29345e+07 0.00339619 1.99978e+07 49.8354 0.00308623 0.994484 0 50.2196 GTEX-1EN7A-0326-SM-7P8T1 1 C1 2 pieces; 5% internal fat 7.2 Muscle Muscle - Skeletal 0011907 989 1072 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.949329 320393 0.980925 0.972649 0.871043 20978 1 76 0.00389866 154 0 8.42014e+07 0.0188487 717133 8.65692e+07 1.35477e+07 20990 4.09915e+07 0 0.109882 0.972649 0.847219 8.42014e+07 0.00719252 1.79209e+07 1.0966e+07 1.78227e+07 191 1.88577e+07 1.81094e+07 0.0055061 1.87812e+07 49.8985 0.00828392 0.995968 0 49.8626 GTEX-1EN7A-0426-SM-7PBYU 0 C1 6 pieces; 5% internal fat 6.2 Nerve Nerve - Tibial 0001323 992 1069 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987299 239396 0.96659 0.991332 0.778363 25674 1 76 0.00279698 384 0 1.18563e+08 0.0331632 472934 1.19599e+08 1.66145e+07 25723 5.88865e+07 0 0.188227 0.991332 0.771616 1.18563e+08 0.0051078 2.57959e+07 1.21868e+07 2.59967e+07 362 2.60877e+07 1.89406e+07 0.00394769 2.61636e+07 50.0726 0.00395432 0.995365 0 50.1939 GTEX-1EN7A-0726-SM-7PBXT 1 C1 2 pieces; 1 with a 0.6 sq mm scar adjacent to a 4 sq mm zone of vacuolated myofibers all consistent with previous ischemic damage 6 Heart Heart - Left Ventricle 0006566 1029 1034 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985148 151698 0.986968 0.988517 0.827881 20965 1 76 0.00237625 371 0 1.23309e+08 0.0129839 8.64071e+06 1.24741e+08 1.66885e+07 20982 6.13508e+07 0 0.159087 0.988517 0.818375 1.23309e+08 0.00406939 2.67649e+07 6.72893e+07 2.72898e+07 375 2.69352e+07 6.60287e+06 0.00321994 2.73824e+07 50.4116 0.069269 0.991887 0 50.4855 GTEX-1EN7A-0826-SM-7MKFV 1 C1 2 pieces; numerous pigmented alveolar macrophages (heart failure cells); 6.5 Lung Lung 0008952 1032 1032 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984758 287562 0.969777 0.989304 0.751649 24547 1 76 0.00440564 155 0 8.14217e+07 0.0299674 305011 8.2302e+07 1.27077e+07 24585 4.03608e+07 0 0.218128 0.989304 0.743609 8.14217e+07 0.00499754 1.76151e+07 8.11518e+06 1.80238e+07 174 1.8152e+07 1.17738e+07 0.00470023 1.78456e+07 49.5744 0.003706 0.99385 0 50.5735 GTEX-1EN7A-0926-SM-7P8RZ 1 C1 2 pieces; widely patent arteries with flat fibrous intimal plaques; well trimmed of adventitial tissue 5.6 Blood Vessel Artery - Coronary 0001621 1037 1027 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.922314 290250 0.960694 0.957601 0.785273 23943 1 76 0.00457896 131 0 7.11432e+07 0.0390619 601666 7.42931e+07 1.16977e+07 23962 3.41213e+07 0 0.175421 0.957601 0.751978 7.11432e+07 0.00919618 1.45341e+07 1.21353e+07 1.47032e+07 145 1.5906e+07 1.09686e+07 0.0068025 1.57593e+07 49.7685 0.00809854 0.992889 0 50.2892 GTEX-1EN7A-1026-SM-7IGPZ 1 C1 2 pieces; no lesions 6 Thyroid Thyroid 0002046 1039 1026 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993795 326388 0.965651 0.994185 0.699342 24667 1 76 0.00200216 151 0 7.78927e+07 0.034085 277410 7.83483e+07 2.91682e+06 24714 3.87972e+07 0 0.266309 0.994185 0.695276 7.78927e+07 0.0025457 1.7057e+07 7.27146e+06 1.72012e+07 168 1.72245e+07 1.07425e+07 0.00227383 1.70662e+07 49.7692 0.00354073 0.994575 0 50.2104 GTEX-1EN7A-1126-SM-7IGQ1 1 C1 6 pieces; thin flat intimal fibrous plaques 5.8 Blood Vessel Artery - Aorta 0001496 1040 1025 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.991947 146690 0.972014 0.992176 0.776945 23137 1 76 0.00201511 162 0 7.54276e+07 0.0276245 357466 7.60224e+07 3.06203e+06 23166 3.75627e+07 0 0.195069 0.992176 0.770866 7.54276e+07 0.0026362 1.63439e+07 8.07865e+06 1.65413e+07 178 1.65174e+07 1.26712e+07 0.00232559 1.63941e+07 49.8127 0.00470212 0.992405 0 50.3001 GTEX-1EN7A-1226-SM-7MGX9 2 C1 6 pieces; squamous epithelium partially sloughed 5.6 Esophagus Esophagus - Mucosa 0006920 1042 1024 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991933 106416 0.973305 0.993856 0.828795 20989 1 76 0.00248712 125 0 5.54111e+07 0.0265672 894229 5.57537e+07 4.34987e+06 21003 2.76044e+07 0 0.144509 0.993856 0.823703 5.54111e+07 0.00354511 1.24368e+07 6.17243e+06 1.26068e+07 153 1.25728e+07 6.65493e+06 0.0030151 1.25691e+07 49.9926 0.0160389 0.995778 0 50.3395 GTEX-1EN7A-1426-SM-7PBY4 1 C1 2 pieces; 1 piece has dense fibrous stroma and mammary ductal hyperplasia (gynecomastoid changes); other piece is fat with 5% fibrovascular content 7 Breast Breast - Mammary Tissue 0008367 1045 1022 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6761,LCSET-7211 05/15/2015 TruSeq.v1 RNASEQ 0.986914 99090 0.968083 0.9879 0.771339 22464 1 76 0.00214915 120 0 5.23588e+07 0.0316074 166584 5.30001e+07 3.19994e+06 22487 2.60932e+07 0 0.196745 0.9879 0.762005 5.23588e+07 0.00302768 1.14251e+07 5.62082e+06 1.14957e+07 124 1.14863e+07 8.4249e+06 0.00258798 1.14855e+07 49.9981 0.00314309 0.988886 0 50.154 GTEX-1EN7A-1526-SM-7MGXC 1 C1 6 pieces; minute foci of squamous epithelial cells in submucosal stroma; otherwise well trimmed muscle 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1046 1022 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988866 116996 0.970998 0.991724 0.821206 22068 1 76 0.00254186 155 0 6.98406e+07 0.0288535 1.64253e+06 7.04235e+07 5.75443e+06 22089 3.47482e+07 0 0.149792 0.991724 0.814409 6.98406e+07 0.00383771 1.51393e+07 6.41076e+06 1.53187e+07 195 1.53062e+07 8.60819e+06 0.00318792 1.53349e+07 50.0469 0.0233236 0.994581 0 50.2944 GTEX-1EN7A-1626-SM-79OLV 1 C1 2 pieces; lobulated fat with <5% fibrous content 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1047 1022 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6380,LCSET-6779 02/19/2015 TruSeq.v1 RNASEQ 0.980836 130320 0.972428 0.984198 0.756289 23052 1 76 0.00462864 121 0 5.96071e+07 0.0273155 171293 6.05641e+07 1.35828e+07 23074 2.96503e+07 0 0.216138 0.984198 0.744339 5.96071e+07 0.00556901 1.30717e+07 6.69845e+06 1.30962e+07 129 1.31494e+07 8.89592e+06 0.00509722 1.32091e+07 50.1132 0.00282829 0.987561 0 50.0469 GTEX-1EN7A-2026-SM-7MGY4 1 C1 2 pieces; severe centrilobular macrovesicular steatosis; 1 mm bile duct hamartoma (von Meyenberg complex) [labeled] 5.7 Liver Liver 0001114 1053 1018 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.992429 215134 0.975263 0.994539 0.82354 20421 1 76 0.00253275 122 0 6.10769e+07 0.0245534 1.033e+06 6.14123e+07 4.83901e+06 20433 3.04257e+07 0 0.151723 0.994539 0.819043 6.10769e+07 0.00332331 1.33896e+07 1.00655e+07 1.3503e+07 149 1.35438e+07 9.2219e+06 0.00292719 1.3466e+07 49.856 0.0168208 0.996649 0 50.2109 GTEX-1EN7A-2026-SM-EZ6Y5 1 C1 2 pieces; severe centrilobular macrovesicular steatosis; 1 mm bile duct hamartoma (von Meyenberg complex) [labeled] Liver Liver 0001114 1053 1018 BP-57645 DNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1EN7A-2226-SM-7MXU6 1 C1 2 pieces; active spermatogenesis 6.6 Testis Testis 0000473 1056 1016 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.97359 186539 0.928354 0.984199 0.721569 32902 1 76 0.00302863 145 0 7.24309e+07 0.0713406 577038 7.35938e+07 1.24586e+07 32958 3.57606e+07 0 0.206785 0.984199 0.710167 7.24309e+07 0.00419148 1.48988e+07 1.07551e+07 1.49194e+07 140 1.52568e+07 1.15077e+07 0.00360379 1.52396e+07 49.9718 0.00784085 0.994807 0 50.0346 GTEX-1EN7A-2426-SM-793DB 0 C1 6 pieces; well trimmed, hair-bearing skin; 5% dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1059 1014 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.99292 397701 0.973018 0.994251 0.766801 23068 1 76 0.00287423 138 0 6.14384e+07 0.0267466 201654 6.17936e+07 7.87333e+06 23099 3.05895e+07 0 0.206217 0.994251 0.762393 6.14384e+07 0.00355543 1.35107e+07 6.30547e+06 1.3481e+07 140 1.35395e+07 1.00525e+07 0.00321438 1.35327e+07 49.9874 0.00326335 0.995582 0 49.945 GTEX-1EN7A-3026-SM-7PBYT 1 C1 4 pieces 5.8 Brain Brain - Cortex 0001870 1075 1002 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988138 440212 0.965732 0.992033 0.84427 23121 1 76 0.00260371 369 0 9.57443e+07 0.0340112 6.72754e+06 9.65131e+07 1.3384e+07 23135 4.75851e+07 0 0.121462 0.992033 0.837544 9.57443e+07 0.00445323 2.06824e+07 3.43472e+07 2.12727e+07 353 2.1139e+07 8.3844e+06 0.00352484 2.1113e+07 49.9693 0.0697059 0.995929 0 50.7036 GTEX-1EN7A-3126-SM-7P8PY 1 C1 1 piece; mostly anterior lobe 5.7 Pituitary Pituitary 0000007 1077 1000 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989978 292102 0.962199 0.991794 0.782179 25228 1 76 0.00305237 268 0 9.22996e+07 0.0375013 1.71619e+06 9.30633e+07 1.4162e+07 25267 4.59509e+07 0 0.180021 0.991794 0.775761 9.22996e+07 0.00359651 2.00644e+07 1.22084e+07 2.06268e+07 284 2.06393e+07 1.01432e+07 0.00332394 2.02054e+07 49.4689 0.0184411 0.99361 0 50.6911 GTEX-1EU9M-0001-SM-EVR3A B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 668 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990629 1.08529e+06 0.97157 0.992425 0.780096 24114 1 76 0.00230686 293 0 1.52034e+08 0.0278314 1.26105e+06 1.53194e+08 1.07815e+07 24180 7.56795e+07 0 0.191474 0.992425 0.774187 1.52034e+08 0.00328511 3.39377e+07 1.94746e+07 3.41961e+07 327 3.42349e+07 3.47056e+07 0.0027951 3.41629e+07 49.9473 0.00823174 0.994222 0 50.1896 GTEX-1EU9M-0003-SM-7J3AO B1 Blood Whole Blood 0013756 668 BP-55574 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1EU9M-0003-SM-7MA71 B1 Blood Whole Blood 0013756 668 BP-55574 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/30/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1EU9M-0006-SM-ARU6I B1 8.5 Blood Whole Blood 0013756 668 BP-55568 RNA isolation_PAXgene Blood RNA (Manual) 07/30/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.975763 1.12221e+06 0.955002 0.977228 0.774348 18559 1 76 0.002225 120 0 6.75545e+07 0.044307 373711 6.91287e+07 2.12052e+06 18569 3.36111e+07 0 0.180654 0.977228 0.756714 6.75545e+07 0.00322942 1.50955e+07 6.12666e+07 1.52021e+07 125 1.52653e+07 1.50657e+07 0.00272646 1.51567e+07 49.8216 0.00540602 0.978693 0 50.1759 GTEX-1EU9M-0011-R2b-SM-9QEH7 B1, A1 6.1 Brain Brain - Substantia nigra 0002038 685 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991168 234775 0.971519 0.994075 0.864125 22124 1 76 0.00186249 271 0 8.36455e+07 0.0282837 8.58523e+06 8.4144e+07 4.11238e+06 22135 4.16384e+07 0 0.107394 0.994075 0.859006 8.36455e+07 0.00381652 1.84169e+07 1.83012e+07 1.8837e+07 325 1.87144e+07 7.07776e+06 0.00283665 1.87265e+07 50.0162 0.10203 0.996983 0 50.5638 GTEX-1EU9M-0011-R3a-SM-9QEHY B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 685 BP-60000 RNA isolation_PAXgene Tissue miRNA 01/26/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989563 327676 0.970111 0.992737 0.86217 21719 1 76 0.00185708 370 0 8.01242e+07 0.0297377 7.90137e+06 8.07104e+07 4.19780e+06 21731 3.98666e+07 0 0.107941 0.992737 0.855908 8.01242e+07 0.00380277 1.7453e+07 1.96595e+07 1.79855e+07 336 1.77912e+07 5.57305e+06 0.00282682 1.78363e+07 50.0633 0.0978978 0.995911 0 50.7514 GTEX-1EU9M-0011-R7b-SM-9OSVU B1, A1 6.3 Brain Brain - Putamen (basal ganglia) 0001874 685 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990442 590484 0.971312 0.992188 0.83921 21871 1 76 0.00243518 371 0 1.22681e+08 0.028558 1.15289e+07 1.23647e+08 1.07943e+07 21882 6.11301e+07 0 0.132101 0.992188 0.832655 1.22681e+08 0.00310004 2.62588e+07 6.45013e+07 2.68758e+07 345 2.6689e+07 7.56046e+06 0.00276702 2.65767e+07 49.8946 0.0932402 0.993934 0 50.5807 GTEX-1EU9M-0011-R9a-SM-9WG61 B1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 685 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991044 321028 0.963784 0.993942 0.854059 22545 1 76 0.00244568 287 0 7.76301e+07 0.0358725 3.68974e+06 7.81033e+07 5.68156e+06 22564 3.86275e+07 0 0.109725 0.993942 0.848885 7.76301e+07 0.00355824 1.72286e+07 1.10379e+07 1.76234e+07 265 1.75032e+07 1.00437e+07 0.00300034 1.75598e+07 50.0807 0.0472418 0.996839 0 50.5663 GTEX-1EU9M-0126-SM-7P8P8 0 B1 2 pieces, ~15-20% interstitial fat, rep delineated 8.1 Muscle Muscle - Skeletal 0011907 834 886 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991106 369854 0.981346 0.993461 0.863708 21114 1 76 0.0025063 271 0 1.01762e+08 0.0183754 1.39983e+06 1.02432e+08 1.41463e+07 21129 5.06572e+07 0 0.117637 0.993461 0.858061 1.01762e+08 0.00360984 2.19111e+07 1.21534e+07 2.22119e+07 260 2.23202e+07 2.14249e+07 0.00305676 2.20169e+07 49.6579 0.0136659 0.995817 0 50.3409 GTEX-1EU9M-0226-SM-7P8SP 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 837 883 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.948874 242918 0.970253 0.971769 0.776347 24945 1 76 0.00451006 181 0 7.1512e+07 0.0294538 343035 7.35895e+07 1.21347e+07 24970 3.48059e+07 0 0.193906 0.971769 0.75443 7.1512e+07 0.00757963 1.50635e+07 9.19109e+06 1.51908e+07 141 1.60394e+07 1.26253e+07 0.00600869 1.58205e+07 49.6565 0.00466146 0.994663 0 50.2104 GTEX-1EU9M-0326-SM-7RHGF 0 B1 2 pieces, ~40% fascia/peripheral nerve, rep delineated 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 838 882 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991559 170753 0.972875 0.99371 0.78611 24092 1 76 0.00249744 278 0 9.52563e+07 0.0267747 605525 9.58593e+07 8.94727e+06 24123 4.74064e+07 0 0.186765 0.99371 0.781165 9.52563e+07 0.00397676 2.0907e+07 8.08925e+06 2.10567e+07 261 2.10663e+07 1.53671e+07 0.0032355 2.10923e+07 50.0308 0.00631681 0.99586 0 50.1784 GTEX-1EU9M-0426-SM-7SB8N 0 B1 2 pieces, no atherosis; rims of fibrous tissue, ~0.5-1mm 6.6 Blood Vessel Artery - Tibial 0007610 841 879 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987544 170696 0.964089 0.990145 0.703507 23822 1 76 0.00300221 160 0 8.3786e+07 0.0355798 474663 8.462e+07 1.01788e+07 23865 4.16525e+07 0 0.260582 0.990145 0.696574 8.3786e+07 0.00414009 1.80055e+07 8.84912e+06 1.8224e+07 173 1.82708e+07 1.20619e+07 0.00356965 1.81649e+07 49.8547 0.00560935 0.992746 0 50.3016 GTEX-1EU9M-0626-SM-7MXUT 1 B1 2 pieces, nubbin of adherent fat/fibrous tissue ensquared; contains ~3mm parathyroid tissue, delineated 6 Thyroid Thyroid 0002046 844 876 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.979944 113631 0.970112 0.987636 0.747984 23946 1 76 0.00284128 120 0 6.4347e+07 0.0296045 277821 6.51526e+07 8.56846e+06 23977 3.18546e+07 0 0.222127 0.987636 0.738736 6.4347e+07 0.00413819 1.40641e+07 6.65653e+06 1.41221e+07 138 1.43223e+07 9.83774e+06 0.00348468 1.43304e+07 50.0141 0.00426416 0.995328 0 50.1029 GTEX-1EU9M-1126-SM-793DE 1 B1 2 pieces, ~5-10% fascia/vascular elements 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 858 862 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993948 263195 0.9779 0.99512 0.807838 22512 1 76 0.002937 163 0 7.4419e+07 0.0216734 732586 7.47839e+07 1.03178e+07 22535 3.70816e+07 0 0.170062 0.99512 0.803896 7.4419e+07 0.00344562 1.65255e+07 7.603e+06 1.65725e+07 178 1.66036e+07 1.23887e+07 0.00319101 1.65789e+07 49.9628 0.00979604 0.996292 0 50.0709 GTEX-1EU9M-1426-SM-793AI 0 B1 6 pieces, squamous epithelium is ~50 microns 8.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 883 837 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992981 250578 0.975019 0.993756 0.801571 22429 1 76 0.00230856 176 0 5.95313e+07 0.0246701 204928 5.99054e+07 5.05096e+06 22451 2.96091e+07 0 0.173448 0.993756 0.796566 5.95313e+07 0.00292326 1.30814e+07 6.06219e+06 1.30313e+07 141 1.31196e+07 1.10344e+07 0.00261567 1.3042e+07 49.8516 0.00342086 0.99453 0 49.9041 GTEX-1EU9M-1526-SM-79OLI 3 B1 2 pieces, glandular elements with advanced autolysis 7.1 Prostate Prostate 0002367 885 835 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6380 01/14/2015 TruSeq.v1 RNASEQ 0.975188 236637 0.963224 0.979416 0.715035 24659 1 76 0.00541601 112 0 5.71332e+07 0.0363802 360829 5.83339e+07 1.35506e+07 24690 2.83871e+07 0 0.248189 0.979416 0.700316 5.71332e+07 0.00680397 1.25481e+07 7.07414e+06 1.25894e+07 116 1.26839e+07 8.09004e+06 0.006107 1.26848e+07 50.0018 0.00618558 0.983643 0 50.0821 GTEX-1EU9M-1626-SM-7EWF2 2 B1 2 pieces, spermatogenesis is present 6.3 Testis Testis 0000473 886 834 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.99141 180757 0.922076 0.992963 0.709588 31530 1 76 0.00235518 128 0 6.15224e+07 0.0775688 636250 6.19585e+07 4.8602e+06 31577 3.06488e+07 0 0.212488 0.992963 0.704594 6.15224e+07 0.00314273 1.26478e+07 8.76942e+06 1.26744e+07 122 1.27128e+07 9.96835e+06 0.00274834 1.26907e+07 49.9567 0.010269 0.994515 0 50.0527 GTEX-1EU9M-1726-SM-7EWF3 1 B1 6 pieces, minimal atherosis 6.3 Blood Vessel Artery - Aorta 0001496 887 833 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.98996 113260 0.971831 0.991934 0.73744 22431 1 76 0.00262236 121 0 5.9714e+07 0.0277381 321488 6.01996e+07 5.25412e+06 22462 2.96934e+07 0 0.234391 0.991934 0.731492 5.9714e+07 0.00385845 1.30528e+07 5.23834e+06 1.31304e+07 129 1.31451e+07 9.325e+06 0.00323918 1.31489e+07 50.0071 0.00534037 0.993909 0 50.1483 GTEX-1EU9M-1826-SM-7DUGU 1 B1 2 pieces, mild-moderate chronic ischemic changes/interstitial fibrosis 7.4 Heart Heart - Left Ventricle 0006566 888 832 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6442 01/24/2015 TruSeq.v1 RNASEQ 0.994143 262789 0.983793 0.994872 0.859109 21543 1 76 0.00253416 268 0 9.92813e+07 0.0159124 2.82703e+06 9.97931e+07 8.80282e+06 21562 4.94842e+07 0 0.124684 0.994872 0.854703 9.92813e+07 0.00374471 2.20718e+07 1.04669e+07 2.24254e+07 307 2.2494e+07 1.85101e+07 0.00313899 2.20728e+07 49.5275 0.0283289 0.9956 0 50.3973 GTEX-1EU9M-1926-SM-7RHH4 1 B1 2 pieces, no abnormalities 6.9 Heart Heart - Atrial Appendage 0006631 889 831 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991769 177512 0.980691 0.99421 0.797411 22996 1 76 0.00233403 268 0 9.91291e+07 0.0190539 3.2443e+06 9.97064e+07 9.27244e+06 23021 4.93445e+07 0 0.183279 0.99421 0.792794 9.91291e+07 0.00401439 2.17976e+07 1.21183e+07 2.19029e+07 321 2.19849e+07 1.35733e+07 0.00317215 2.19228e+07 49.9293 0.0325385 0.99665 0 50.1205 GTEX-1EU9M-2026-SM-7RHGE 1 B1 2 pieces, discontinuous rim of adherent fat/peripheran nerve, up to ~1.2mm 5.7 Blood Vessel Artery - Coronary 0001621 901 819 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.988121 199367 0.974411 0.991351 0.690148 23803 1 76 0.00283071 159 0 8.5081e+07 0.0252085 813356 8.58232e+07 8.61209e+06 23851 4.22556e+07 0 0.284263 0.991351 0.68418 8.5081e+07 0.00440255 1.86952e+07 8.94332e+06 1.88507e+07 178 1.89168e+07 1.11329e+07 0.00361407 1.88958e+07 49.9723 0.00947711 0.994582 0 50.2071 GTEX-1EU9M-2126-SM-7P8P7 1 B1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 906 814 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.981521 386947 0.970923 0.984352 0.780621 25082 1 76 0.00311873 273 0 1.16422e+08 0.0288225 2.12303e+06 1.18273e+08 1.68422e+07 25120 5.78833e+07 0 0.190302 0.984352 0.768406 1.16422e+08 0.00405576 2.51922e+07 1.16454e+07 2.5803e+07 313 2.58869e+07 1.54154e+07 0.0035859 2.54133e+07 49.5384 0.0179503 0.987183 0 50.5989 GTEX-1EU9M-2326-SM-7MKGS 1 B1 6 pieces. Squamous mucosa is ~0.1-0.2mm, ~10-20% thickness 5.8 Esophagus Esophagus - Mucosa 0006920 907 813 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986395 223817 0.972279 0.99056 0.774327 23433 1 76 0.00420712 131 0 7.23736e+07 0.0274652 635002 7.30633e+07 1.0699e+07 23457 3.59024e+07 0 0.197952 0.99056 0.767017 7.23736e+07 0.00519033 1.60783e+07 9.06289e+06 1.63285e+07 160 1.64359e+07 9.96804e+06 0.00469666 1.62651e+07 49.7388 0.00869112 0.994724 0 50.3861 GTEX-1EU9M-2726-SM-7P8QD 1 B1 6 pieces, confirmed target muscularis; few ~3mm nubbins of adherent fat/mucoid debris, rep delineated 6.7 Colon Colon - Sigmoid 0001159 916 804 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989062 389476 0.975835 0.990912 0.795377 23237 1 76 0.0029249 204 0 8.76406e+07 0.0238862 1.05073e+06 8.84444e+07 1.14921e+07 23261 4.36176e+07 0 0.180458 0.990912 0.788148 8.76406e+07 0.00406014 1.89327e+07 8.86172e+06 1.92708e+07 238 1.92945e+07 1.39397e+07 0.00349146 1.90592e+07 49.6932 0.0118801 0.992761 0 50.4424 GTEX-1EU9M-2826-SM-7EWFH 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperlasia. 6.3 Breast Breast - Mammary Tissue 0008367 924 796 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6444 01/28/2015 TruSeq.v1 RNASEQ 0.989212 85268 0.9734 0.991385 0.765011 22406 1 76 0.00261804 120 0 5.42977e+07 0.0263098 741837 5.47695e+07 4.91005e+06 22427 2.69602e+07 0 0.208389 0.991385 0.758421 5.42977e+07 0.00376444 1.21435e+07 5.55222e+06 1.19667e+07 133 1.22416e+07 7.03978e+06 0.00318998 1.19755e+07 49.4506 0.0135447 0.993559 0 49.6333 GTEX-1EU9M-2926-SM-793DF 1 B1 2 pieces (fragmented), no abnormalities 7.6 Brain Brain - Cerebellum 0002037 945 775 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993436 467961 0.945211 0.994475 0.713706 23904 1 76 0.00322678 154 0 7.92364e+07 0.0543589 942591 7.96766e+07 1.16639e+07 23941 3.94635e+07 0 0.231505 0.994475 0.709762 7.92364e+07 0.00347425 1.71288e+07 1.62359e+07 1.71983e+07 175 1.72654e+07 1.01356e+07 0.00335039 1.71387e+07 49.8159 0.0118302 0.995513 0 50.1012 GTEX-1EU9M-3026-SM-7P8TO 1 B1 1 piece, ~70% adenohypophysis; 7x4mm fragment of neurohypophysis is ~30%, delineated 6.7 Pituitary Pituitary 0000007 947 773 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.949197 271837 0.966244 0.971637 0.713887 26901 1 76 0.00456825 130 0 8.56556e+07 0.0333797 603808 8.8156e+07 1.45353e+07 26945 4.17024e+07 0 0.252357 0.971637 0.693639 8.56556e+07 0.00787551 1.79063e+07 1.28299e+07 1.80112e+07 156 1.90091e+07 1.26796e+07 0.00618369 1.87439e+07 49.6488 0.00684931 0.994077 0 50.146 GTEX-1EWIQ-0001-SM-EVR3B C1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 557 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989979 2.02006e+06 0.96458 0.992025 0.773463 23562 1 76 0.00256253 287 0 1.36499e+08 0.0348384 1.05981e+06 1.37597e+08 1.07535e+07 23614 6.79252e+07 0 0.191118 0.992025 0.767294 1.36499e+08 0.0036731 3.02562e+07 1.80988e+07 3.05107e+07 314 3.05714e+07 3.11108e+07 0.00311667 3.04581e+07 49.9072 0.00770229 0.994071 0 50.2094 GTEX-1EWIQ-0002-SM-7J3AN C1 Blood Whole Blood 0013756 557 BP-55626 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/01/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1EWIQ-0002-SM-7MA78 C1 Blood Whole Blood 0013756 557 BP-55626 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/01/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1EWIQ-0005-SM-ADEHB C1 8.9 Blood Whole Blood 0013756 557 BP-55638 RNA isolation_PAXgene Blood RNA (Manual) 08/01/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.956436 1.10404e+06 0.975974 0.962531 0.791249 22243 1 76 0.00347333 276 0 1.94497e+08 0.0227682 579353 2.02068e+08 1.88233e+07 22282 9.62615e+07 0 0.184725 0.962531 0.761601 1.94497e+08 0.00332477 4.49497e+07 2.58427e+08 4.53328e+07 304 4.58959e+07 5.08576e+07 0.00339952 4.5562e+07 49.8175 0.00286712 0.968626 0 50.2122 GTEX-1EWIQ-0008-SM-EVR3F C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 618 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.991889 506143 0.984374 0.993712 0.872182 21149 1 76 0.00181737 296 0 1.36062e+08 0.0153104 226461 1.36922e+08 8.75573e+06 21173 6.77639e+07 0 0.112192 0.993712 0.866698 1.36062e+08 0.00276626 3.06927e+07 1.19125e+07 3.09431e+07 329 3.09958e+07 3.6095e+07 0.00229094 3.08735e+07 49.9011 0.00165394 0.995536 0 50.2032 GTEX-1EWIQ-0011-R11a-SM-9OSX6 C1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 575 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 EXCLUDE 0.987327 596799 0.955078 0.990787 0.840944 21590 1 76 0.00311014 367 0 8.94707e+07 0.0445513 9.41036e+06 9.03027e+07 8.69337e+06 21602 4.44784e+07 0 0.114134 0.990787 0.833196 8.94707e+07 0.00448729 1.88991e+07 3.7704e+07 2.02386e+07 346 1.99005e+07 3.58819e+06 0.00379631 1.94512e+07 49.4292 0.104209 0.994247 0 51.7113 GTEX-1EWIQ-0011-R1a-SM-9OSX7 C1, A1 6.6 Brain Brain - Hippocampus 0001954 575 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989077 431577 0.959352 0.992659 0.833824 22974 1 76 0.00295811 368 0 9.32764e+07 0.0405144 7.84176e+06 9.39662e+07 9.12468e+06 22991 4.6376e+07 0 0.125528 0.992659 0.827703 9.32764e+07 0.00447005 2.00136e+07 2.83508e+07 2.06281e+07 338 2.04287e+07 5.25190e+06 0.00371135 2.04681e+07 50.0482 0.083453 0.996241 0 50.7559 GTEX-1EWIQ-0011-R6a-SM-ARU8G C1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 575 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992858 249935 0.97176 0.994518 0.843595 19630 1 76 0.00257618 145 0 5.511e+07 0.0281713 7.21431e+06 5.54138e+07 1.85837e+06 19635 2.7453e+07 0 0.128165 0.994518 0.838971 5.511e+07 0.00341972 1.18797e+07 1.83176e+07 1.23681e+07 181 1.21582e+07 2.18094e+06 0.00299725 1.21563e+07 49.9961 0.13019 0.996178 0 51.0071 GTEX-1EWIQ-0011-R8a-SM-9OSX8 C1, A1 6.8 Brain Brain - Hypothalamus 0001898 575 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 EXCLUDE 0.988132 493142 0.947074 0.991425 0.776219 23605 1 76 0.00291268 268 0 1.04999e+08 0.0527341 4.18757e+06 1.05907e+08 1.05386e+07 23638 5.2201e+07 0 0.170856 0.991425 0.769562 1.04999e+08 0.00405071 2.24386e+07 2.53501e+07 2.29567e+07 323 2.29323e+07 7.3647e+06 0.00347981 2.27546e+07 49.8054 0.0395399 0.994717 0 50.5707 GTEX-1EWIQ-0011-R9a-SM-ARL8L C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 575 BP-67764 RNA isolation_PAXgene Tissue miRNA 10/05/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.994011 635869 0.963636 0.994199 0.823054 22113 1 76 0.00188274 180 0 6.50224e+07 0.0360466 2.5977e+06 6.54018e+07 3.13392e+06 22132 3.23514e+07 0 0.140583 0.994199 0.818279 6.50224e+07 0.0023053 1.44139e+07 9.60942e+06 1.45448e+07 180 1.45819e+07 8.68715e+06 0.00209398 1.43844e+07 49.6592 0.0397191 0.994386 0 50.2259 GTEX-1EWIQ-0126-SM-7RHH2 1 C1 6 pieces; up to ~10% fat, largely external, epidermis measures 41 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 617 765 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992489 150502 0.976504 0.99445 0.850074 22933 1 76 0.00251926 265 0 8.82641e+07 0.0231792 415715 8.87567e+07 8.82734e+06 22958 4.39561e+07 0 0.12643 0.99445 0.845356 8.82641e+07 0.00375138 1.89815e+07 9.86328e+06 1.91484e+07 250 1.91691e+07 1.66111e+07 0.0031341 1.91252e+07 49.9427 0.00468376 0.99641 0 50.2188 GTEX-1EWIQ-0226-SM-793D3 0 C1 2 pieces; 1 piece is ~20% fibrous/vascular 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 620 762 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993137 324011 0.971985 0.994419 0.781186 23302 1 76 0.00312496 153 0 6.91619e+07 0.0276618 288209 6.95501e+07 9.53322e+06 23336 3.44419e+07 0 0.190799 0.994419 0.776826 6.91619e+07 0.0038002 1.52393e+07 6.67449e+06 1.52615e+07 154 1.53059e+07 1.13828e+07 0.00346215 1.52801e+07 49.9578 0.00414391 0.995701 0 50.0364 GTEX-1EWIQ-0326-SM-7DHMQ 1 C1 6 pieces; well trimmed, minimal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 621 761 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6441 01/14/2015 TruSeq.v1 RNASEQ 0.98993 135749 0.973229 0.99108 0.777301 23902 1 76 0.0037185 170 0 7.03291e+07 0.0265126 226521 7.09621e+07 5.51010e+06 23933 3.49878e+07 0 0.195928 0.99108 0.770367 7.03291e+07 0.00557012 1.54033e+07 7.39211e+06 1.55222e+07 149 1.55655e+07 1.19185e+07 0.00464323 1.5434e+07 49.7879 0.00319214 0.99223 0 50.1922 GTEX-1EWIQ-0426-SM-793D4 0 C1 2 pieces; 1 piece includes ~10% mostly internal fat 7.8 Nerve Nerve - Tibial 0001323 632 751 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6379 01/14/2015 TruSeq.v1 RNASEQ 0.993165 355508 0.968326 0.994388 0.747551 24033 1 76 0.00303962 168 0 7.33318e+07 0.0313427 162737 7.37457e+07 1.01890e+07 24079 3.6516e+07 0 0.220775 0.994388 0.743356 7.33318e+07 0.00371787 1.62132e+07 6.45727e+06 1.61668e+07 158 1.62342e+07 1.19108e+07 0.00337833 1.62345e+07 50.0003 0.00220673 0.995611 0 49.9284 GTEX-1EWIQ-0526-SM-7PBYV 1 C1 2 pieces; some medial calcification, mild atherosclerosis 6.3 Blood Vessel Artery - Tibial 0007610 633 751 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986584 284860 0.971944 0.990653 0.810089 23057 1 76 0.00289505 275 0 1.01788e+08 0.0276853 490694 1.02748e+08 1.3989e+07 23093 5.05497e+07 0 0.161855 0.990653 0.802517 1.01788e+08 0.00501185 2.16255e+07 8.09367e+06 2.18786e+07 286 2.19697e+07 1.7683e+07 0.0039491 2.19155e+07 49.9383 0.0047757 0.994723 0 50.2908 GTEX-1EWIQ-0626-SM-7PBYW 1 C1 2 pieces; include from 5-15% inteernal (mostly) and external fat 7 Muscle Muscle - Skeletal 0011907 636 748 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989088 154287 0.982246 0.992158 0.873912 21050 1 76 0.00275845 201 0 9.23879e+07 0.0175216 1.14404e+06 9.31181e+07 1.22132e+07 21064 4.59679e+07 0 0.108334 0.992158 0.867059 9.23879e+07 0.00439533 1.97618e+07 9.51649e+06 2.00432e+07 251 2.00656e+07 1.89717e+07 0.00357436 1.99857e+07 49.9003 0.0122858 0.995228 0 50.3534 GTEX-1EWIQ-0726-SM-7MKFW 2 C1 2 pieces; mild to moderate steatosis 6.9 Liver Liver 0001114 645 740 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.978924 282726 0.971546 0.986873 0.818457 21707 1 76 0.0043431 150 0 7.30188e+07 0.0283404 1.71451e+06 7.39901e+07 1.14461e+07 21724 3.60807e+07 0 0.153089 0.986873 0.807713 7.30188e+07 0.00568082 1.587e+07 1.02111e+07 1.60517e+07 179 1.62224e+07 8.82855e+06 0.00500657 1.62097e+07 49.9804 0.0231721 0.994823 0 50.2846 GTEX-1EWIQ-0826-SM-7MXTH 2 C1 2 pieces 6.8 Thyroid Thyroid 0002046 653 732 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975631 126058 0.965053 0.985534 0.744168 25206 1 76 0.00310667 162 0 7.94134e+07 0.0346574 344800 8.05791e+07 1.21522e+07 25244 3.92242e+07 0 0.220885 0.985534 0.733403 7.94134e+07 0.00431756 1.71758e+07 8.42994e+06 1.72391e+07 170 1.75665e+07 1.19686e+07 0.00370603 1.75878e+07 50.0303 0.00427903 0.995436 0 50.0919 GTEX-1EWIQ-0926-SM-7RHG7 1 C1 2 pieces; include large vessels, cartilage (not target), some congestion, edema 7.7 Lung Lung 0008952 654 732 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.989308 266207 0.975341 0.991639 0.73523 24772 1 76 0.00280651 200 0 9.26078e+07 0.0242576 337865 9.33886e+07 8.05452e+06 24812 4.60621e+07 0 0.240111 0.991639 0.729083 9.26078e+07 0.00394404 2.05997e+07 9.19048e+06 2.07028e+07 205 2.07625e+07 1.40379e+07 0.00337394 2.07544e+07 49.9902 0.00361784 0.993971 0 50.1248 GTEX-1EWIQ-1026-SM-7P8S1 1 C1 6 pieces; atherosclerosis 5.7 Blood Vessel Artery - Aorta 0001496 656 730 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.925445 223963 0.958496 0.958483 0.707883 24353 1 76 0.00507463 115 0 6.69403e+07 0.0411765 317955 6.98398e+07 1.18239e+07 24384 3.21511e+07 0 0.250613 0.958483 0.678494 6.69403e+07 0.00919868 1.37928e+07 9.58450e+06 1.39633e+07 126 1.50755e+07 8.57427e+06 0.00706558 1.48529e+07 49.6281 0.00455263 0.991521 0 50.3072 GTEX-1EWIQ-1126-SM-7EPIK 1 C1 2 pieces; 1 piece is ~40% fat, external 6.8 Heart Heart - Atrial Appendage 0006631 657 730 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.991237 247475 0.975842 0.993701 0.819267 22864 1 76 0.00336858 122 0 8.37083e+07 0.0237606 3.97681e+06 8.42389e+07 1.13999e+07 22891 4.16727e+07 0 0.156575 0.993701 0.814107 8.37083e+07 0.0118295 1.8111e+07 1.70861e+07 1.83958e+07 164 1.85017e+07 9.31132e+06 0.00758853 1.81799e+07 49.5614 0.0472087 0.996166 0 50.3901 GTEX-1EWIQ-1426-SM-7IGOS 1 C1 2 pieces; some increased interstitial fibrosis and hypertrophy 5.7 Heart Heart - Left Ventricle 0006566 664 725 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.994563 145042 0.986872 0.995166 0.854781 18980 1 76 0.00236182 259 0 7.43749e+07 0.013073 6.03261e+06 7.47361e+07 2.51212e+06 18984 3.70907e+07 0 0.132091 0.995166 0.850649 7.43749e+07 0.00281887 1.61918e+07 2.81129e+07 1.69216e+07 328 1.69388e+07 2.91012e+06 0.0025902 1.62313e+07 48.9335 0.0807188 0.995769 0 51.1021 GTEX-1EWIQ-1526-SM-79OO7 1 C1 6 pieces 6.7 Esophagus Esophagus - Mucosa 0006920 665 724 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6381 01/14/2015 TruSeq.v1 RNASEQ 0.993326 121877 0.974567 0.993409 0.826337 20742 1 76 0.00320349 123 0 5.93992e+07 0.0252491 725136 5.97933e+07 3.49595e+06 20756 2.95974e+07 0 0.14823 0.993409 0.82089 5.93992e+07 0.00445317 1.3311e+07 6.9164e+06 1.34235e+07 151 1.34115e+07 8.2754e+06 0.00382828 1.33284e+07 49.8447 0.0121274 0.993492 0 50.2105 GTEX-1EWIQ-1726-SM-7SB7T 1 C1 2 pieces; 80-90% adipose tissue with small contribution of fibrous stroma and ducts/few lobules 5.6 Breast Breast - Mammary Tissue 0008367 668 722 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989717 313062 0.96532 0.991999 0.703014 25615 1 76 0.0030029 162 0 8.47318e+07 0.0343298 431676 8.54152e+07 9.80442e+06 25662 4.2141e+07 0 0.262307 0.991999 0.697389 8.47318e+07 0.00426934 1.85497e+07 1.27308e+07 1.8774e+07 176 1.88174e+07 1.15441e+07 0.00363466 1.86945e+07 49.8362 0.00505385 0.994282 0 50.3004 GTEX-1EWIQ-2226-SM-7MGXJ 0 C1 2 pieces; largely hilum/vessels, ovarian stroma with corpora fibrosa 7 Ovary Ovary 0000992 678 715 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989373 248023 0.957058 0.991962 0.735758 23622 1 76 0.0026895 149 0 7.56328e+07 0.0427345 231890 7.62456e+07 5.88618e+06 23672 3.76371e+07 0 0.221299 0.991962 0.729844 7.56328e+07 0.00382296 1.62957e+07 1.26937e+07 1.64661e+07 159 1.6471e+07 1.25821e+07 0.00325475 1.64852e+07 50.0216 0.00304135 0.994552 0 50.26 GTEX-1EWIQ-2326-SM-7IGNF 1 C1 6 pieces; epithelium is atrophic/partially sloughed 6.2 Vagina Vagina 0000996 682 712 BP-56446 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2014 LCSET-6445 02/26/2015 TruSeq.v1 RNASEQ 0.99249 231962 0.966627 0.993402 0.744015 24014 1 76 0.00227621 135 0 6.74443e+07 0.0330667 245953 6.78922e+07 4.21198e+06 24044 3.35927e+07 0 0.222611 0.993402 0.739107 6.74443e+07 0.00317664 1.4788e+07 6.7644e+06 1.48771e+07 148 1.48685e+07 1.06311e+07 0.00272601 1.48618e+07 49.9887 0.0036227 0.994315 0 50.1502 GTEX-1EWIQ-2526-SM-7EPIJ 1 C1 2 pieces; mature adipose tissue 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 686 710 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6443 01/28/2015 TruSeq.v1 RNASEQ 0.990479 148347 0.97311 0.992692 0.782579 24219 1 76 0.00320616 126 0 7.89743e+07 0.0264757 246370 7.95557e+07 1.0195e+07 24251 3.93164e+07 0 0.190531 0.992692 0.77686 7.89743e+07 0.0117016 1.7372e+07 8.93362e+06 1.74934e+07 137 1.75325e+07 1.35735e+07 0.00744439 1.74993e+07 49.9526 0.00309682 0.994906 0 50.1741 GTEX-1EWIQ-3026-SM-7IGOJ 1 C1 4 pieces; Purkinje cells well visualized 5.9 Brain Brain - Cerebellum 0002037 707 691 BP-56500 RNA Extraction from Paxgene-derived Lysate Plate Based 09/11/2014 LCSET-6446 03/04/2015 TruSeq.v1 RNASEQ 0.993389 1.38845e+06 0.896115 0.993955 0.699013 23560 1 76 0.00219546 196 0 8.39822e+07 0.103597 3.20267e+06 8.4493e+07 3.06599e+06 23579 4.1847e+07 0 0.197102 0.993955 0.694787 8.39822e+07 0.00251069 1.68142e+07 7.0666e+07 1.77224e+07 247 1.7648e+07 5.57249e+06 0.00235299 1.69573e+07 49.002 0.0379045 0.994521 0 51.3148 GTEX-1EWIQ-3126-SM-7MXTI 1 C1 4 pieces 5.6 Brain Brain - Cortex 0001870 709 690 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976603 382338 0.961536 0.986198 0.820849 23703 1 76 0.00319728 269 0 9.12359e+07 0.0381921 4.48469e+06 9.25128e+07 1.41313e+07 23718 4.51052e+07 0 0.140687 0.986198 0.80952 9.12359e+07 0.00435128 1.94418e+07 3.72314e+07 1.96313e+07 271 1.98025e+07 8.35832e+06 0.00376867 2.00287e+07 50.284 0.0484764 0.995793 0 50.2425 GTEX-1EWIQ-3226-SM-7MKGP 2 C1 1 piece; adenohypophysis in this section 6 Pituitary Pituitary 0000007 710 689 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.99084 529407 0.958891 0.993188 0.770372 26868 1 76 0.00302366 273 0 1.15787e+08 0.0408571 892277 1.16581e+08 1.10043e+07 26919 5.76024e+07 0 0.188519 0.993188 0.765125 1.15787e+08 0.00386421 2.49699e+07 2.12807e+07 2.52867e+07 317 2.54326e+07 1.61604e+07 0.00344294 2.50841e+07 49.6551 0.00765372 0.995536 0 50.3152 GTEX-1EX96-0004-SM-7J3AP B1 Blood Whole Blood 0013756 702 BP-55661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1EX96-0004-SM-7MA72 B1 Blood Whole Blood 0013756 702 BP-55661 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1EX96-0006-SM-ARU6J B1 8.7 Blood Whole Blood 0013756 702 BP-55660 RNA isolation_PAXgene Blood RNA (Manual) 08/04/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.989158 1.16229e+06 0.953903 0.990547 0.697894 18584 1 76 0.00267982 104 0 7.41552e+07 0.0454436 154411 7.48628e+07 2.59572e+06 18602 3.68912e+07 0 0.256009 0.990547 0.691297 7.41552e+07 0.00346442 1.66926e+07 7.54178e+07 1.67721e+07 118 1.68537e+07 1.48565e+07 0.00307157 1.67389e+07 49.8291 0.00206259 0.991937 0 50.1189 GTEX-1EX96-0008-SM-EWRMB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 788 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.99104 558089 0.983816 0.993788 0.872109 21538 1 76 0.00196363 391 0 1.37367e+08 0.0158645 307697 1.38225e+08 9.10983e+06 21554 6.83863e+07 0 0.111707 0.993788 0.866691 1.37367e+08 0.00265609 3.09212e+07 1.13391e+07 3.11518e+07 328 3.12834e+07 3.55766e+07 0.0023008 3.11213e+07 49.8701 0.00222605 0.996535 0 50.1857 GTEX-1EX96-0011-R10b-SM-CE6QR B1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 704 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990101 715137 0.962353 0.991328 0.852378 23850 1 76 0.0078104 203 0 8.52412e+07 0.0372771 2.65587e+06 8.59869e+07 1.37015e+07 23866 4.24229e+07 0 0.109976 0.991328 0.844986 8.52412e+07 0.0069607 1.86472e+07 1.1968e+07 1.8852e+07 233 1.88717e+07 1.14509e+07 0.00738607 1.87191e+07 49.7969 0.0308869 0.992554 0 50.273 GTEX-1EX96-0011-R1a-SM-CE6R5 B1, A1 6 Brain Brain - Hippocampus 0001954 704 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990012 516491 0.963158 0.991425 0.849328 22832 1 76 0.0076265 197 0 7.68827e+07 0.0366685 6.50008e+06 7.75476e+07 1.17756e+07 22848 3.82601e+07 0 0.11383 0.991425 0.842045 7.68827e+07 0.00719528 1.67971e+07 1.87126e+07 1.70957e+07 232 1.70432e+07 5.91485e+06 0.00741119 1.6923e+07 49.8231 0.0838204 0.992839 0 50.4405 GTEX-1EX96-0011-R3b-SM-ARZMH B1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 704 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988202 882638 0.956563 0.990452 0.824391 22590 1 76 0.00237398 160 0 6.30646e+07 0.043134 3.65809e+06 6.36725e+07 2.72633e+06 22607 3.12897e+07 0 0.132172 0.990452 0.816519 6.30646e+07 0.00343836 1.35332e+07 1.70605e+07 1.38786e+07 181 1.39476e+07 7.1938e+06 0.00290496 1.3579e+07 49.3305 0.0574516 0.992701 0 50.6301 GTEX-1EX96-0011-R4a-SM-ARU82 B1, A1 5.8 Brain Brain - Amygdala 0001876 704 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992334 327413 0.971415 0.993782 0.864609 21602 1 76 0.00177576 369 0 7.80677e+07 0.0284393 9.77499e+06 7.85562e+07 2.6306e+06 21613 3.89071e+07 0 0.106806 0.993782 0.859233 7.80677e+07 0.00250156 1.71461e+07 1.7541e+07 1.77024e+07 342 1.75304e+07 5.41252e+06 0.00213813 1.73956e+07 49.8071 0.124433 0.995229 0 50.7983 GTEX-1EX96-0011-R5a-SM-ARU83 B1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 704 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992846 514515 0.961333 0.994154 0.829677 24625 1 76 0.00195603 269 0 8.45261e+07 0.0383326 4.09534e+06 8.50232e+07 2.89792e+06 24648 4.21117e+07 0 0.131655 0.994154 0.824827 8.45261e+07 0.00256418 1.84364e+07 1.62803e+07 1.87682e+07 296 1.87379e+07 9.69592e+06 0.0022597 1.85651e+07 49.7683 0.0481674 0.995462 0 50.4459 GTEX-1EX96-0011-R6a-SM-9OSVV B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 704 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99016 727138 0.959901 0.993161 0.845182 24483 1 76 0.00236886 272 0 1.19048e+08 0.0398148 7.34163e+06 1.19868e+08 1.16461e+07 24505 5.92238e+07 0 0.114719 0.993161 0.839401 1.19048e+08 0.00339861 2.58407e+07 3.34876e+07 2.60552e+07 329 2.60828e+07 1.26076e+07 0.00288218 2.61206e+07 50.0361 0.0612476 0.996161 0 50.2066 GTEX-1EX96-0011-R7a-SM-9OSVW B1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 704 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990336 726555 0.960118 0.993365 0.840943 23821 1 76 0.00235511 273 0 1.10566e+08 0.0396432 8.44198e+06 1.11305e+08 1.06844e+07 23838 5.50078e+07 0 0.119175 0.993365 0.835364 1.10566e+08 0.0034152 2.38101e+07 3.84384e+07 2.44997e+07 327 2.43319e+07 1.04956e+07 0.00288354 2.4255e+07 49.9209 0.0758457 0.996394 0 50.7137 GTEX-1EX96-0126-SM-9KNVH 2 B1 2 pieces, no abnormalities 6 Thyroid Thyroid 0002046 766 1089 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991348 237833 0.970667 0.992603 0.772026 25145 1 76 0.00262513 278 0 1.05637e+08 0.029014 486017 1.06424e+08 1.22132e+07 25194 5.26198e+07 0 0.198642 0.992603 0.766315 1.05637e+08 0.00370814 2.3215e+07 1.19012e+07 2.33661e+07 283 2.33683e+07 1.79902e+07 0.00316595 2.33476e+07 49.9778 0.0045668 0.993858 0 50.1621 GTEX-1EX96-0226-SM-7RHHR 2 B1 2 pieces, chronic congestive changes 6 Lung Lung 0008952 767 1088 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.988742 175088 0.975142 0.991421 0.776026 24636 1 76 0.00293616 274 0 1.06477e+08 0.024227 963897 1.07398e+08 1.09102e+07 24674 5.29423e+07 0 0.199116 0.991421 0.769369 1.06477e+08 0.00411107 2.3503e+07 1.25206e+07 2.37209e+07 310 2.37699e+07 1.6248e+07 0.00352203 2.37313e+07 49.9594 0.00897501 0.994101 0 50.2307 GTEX-1EX96-0826-SM-7MGXK 2 B1 2 pieces, spermatogenesis markedly reduced 6 Testis Testis 0000473 775 1080 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6755 04/12/2015 TruSeq.v1 EXCLUDE 0.989637 174415 0.963548 0.992191 0.757985 24253 1 76 0.00273036 128 0 6.65427e+07 0.0362767 1.68467e+06 6.70664e+07 4.9995e+06 24291 3.3118e+07 0 0.205563 0.992191 0.752066 6.65427e+07 0.00384889 1.46468e+07 6.7577e+06 1.47338e+07 158 1.47839e+07 7.93225e+06 0.00328819 1.47542e+07 49.9498 0.0251194 0.994745 0 50.148 GTEX-1EX96-0926-SM-7MGXL 1 B1 2 pieces, diffuse chronic inflammation/mesenteritis; rep lymphoid aggregates delineated 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 776 1079 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6755 04/12/2015 TruSeq.v1 EXCLUDE 0.973345 122930 0.972673 0.97568 0.747865 21961 1 76 0.00632299 131 0 7.02117e+07 0.0166075 315084 7.19619e+07 5.8378e+06 22002 3.45205e+07 0 0.224808 0.97568 0.729677 7.02117e+07 0.00701242 1.60044e+07 2.99246e+07 1.61164e+07 140 1.62136e+07 9.86157e+06 0.00666688 1.60726e+07 49.7816 0.00437849 0.978014 0 50.1744 GTEX-1EX96-1026-SM-7MKG2 1 B1 6 pieces, no significant dermal fat; squamous epithelium is ~60-70 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 779 1076 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980593 325293 0.968248 0.987233 0.775274 22728 1 76 0.00413315 125 0 5.52443e+07 0.0314665 404442 5.59588e+07 8.61928e+06 22749 2.73226e+07 0 0.192974 0.987233 0.765376 5.52443e+07 0.00527301 1.18842e+07 9.2141e+06 1.20321e+07 113 1.22121e+07 9.50506e+06 0.00469925 1.20573e+07 49.681 0.0072275 0.993873 0 50.3092 GTEX-1EX96-1226-SM-7RHG1 0 B1 2 pieces, prominent Mockeberg medial sclerosis (rep delineated), ~40% atherotic occlusion, encircled 6.1 Blood Vessel Artery - Tibial 0007610 782 1073 BP-57437 RNA Extraction from Paxgene-derived Lysate Plate Based 10/22/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990068 147018 0.976194 0.992666 0.819662 22423 1 76 0.0025744 169 0 7.84325e+07 0.0234503 236030 7.9012e+07 7.8067e+06 22443 3.90065e+07 0 0.156532 0.992666 0.81365 7.84325e+07 0.00400023 1.7053e+07 6.73778e+06 1.71695e+07 186 1.71806e+07 1.44524e+07 0.00328545 1.7241e+07 50.0877 0.00298727 0.995263 0 50.1701 GTEX-1EX96-1326-SM-7PC36 0 B1 2 pieces, partial rim of adherent fat up to ~2mm, rep delineated 6.2 Nerve Nerve - Tibial 0001323 784 1071 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985781 276040 0.976178 0.989517 0.823649 23902 1 76 0.00348303 183 0 8.61439e+07 0.0234766 415190 8.70565e+07 1.4123e+07 23931 4.27344e+07 0 0.15253 0.989517 0.815014 8.61439e+07 0.00480221 1.88476e+07 1.00787e+07 1.90674e+07 193 1.91632e+07 1.72932e+07 0.00414013 1.90675e+07 49.8748 0.0047692 0.993252 0 50.2898 GTEX-1EX96-1426-SM-7PBZ5 0 B1 2 pieces, ~20% fascia; rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 785 1070 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988646 224712 0.974512 0.992031 0.790155 24073 1 76 0.00311195 274 0 1.00202e+08 0.0250945 498485 1.01007e+08 1.45971e+07 24109 4.97844e+07 0 0.184357 0.992031 0.783858 1.00202e+08 0.00475976 2.19928e+07 1.0085e+07 2.22238e+07 282 2.22931e+07 1.52534e+07 0.00393304 2.22468e+07 49.948 0.00493516 0.995415 0 50.2613 GTEX-1EX96-1526-SM-7PBXK 0 B1 2 pieces, ~25% adherent/interstitial fat; rep delineated 8.3 Muscle Muscle - Skeletal 0011907 786 1069 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761,LCSET-7211 05/15/2015 TruSeq.v1 RNASEQ 0.995048 97409 0.981998 0.996059 0.873076 18602 1 76 0.00170588 126 0 5.82236e+07 0.0178219 766314 5.8454e+07 3.93353e+06 18613 2.905e+07 0 0.108923 0.996059 0.869635 5.82236e+07 0.00269863 1.27551e+07 6.22994e+06 1.28501e+07 140 1.2822e+07 1.23049e+07 0.00220175 1.28377e+07 50.0306 0.0131097 0.99707 0 50.1854 GTEX-1EX96-1626-SM-7PBXR 0 B1 6 pieces, no significant dermal fat; squamous epithelium up to ~40-50 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 789 1066 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987201 189932 0.971406 0.991382 0.764059 24277 1 76 0.00290273 185 0 8.22275e+07 0.028392 640238 8.29423e+07 1.05141e+07 24312 4.0839e+07 0 0.207347 0.991382 0.757474 8.22275e+07 0.00555312 1.79352e+07 9.28221e+06 1.80658e+07 189 1.81353e+07 1.21779e+07 0.00422234 1.81878e+07 50.0722 0.00771908 0.995563 0 50.1813 GTEX-1EX96-2126-SM-9KNU8 2 B1 6 pieces, confirmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 811 1044 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992943 170646 0.971029 0.993943 0.761695 23634 1 76 0.00269863 195 0 8.09504e+07 0.0287585 1.95954e+06 8.14436e+07 9.53228e+06 23675 4.03274e+07 0 0.209333 0.993943 0.757082 8.09504e+07 0.00346578 1.77163e+07 7.69484e+06 1.7978e+07 207 1.79438e+07 1.01032e+07 0.00308182 1.78301e+07 49.8411 0.0240601 0.994944 0 50.3666 GTEX-1EX96-2226-SM-7MKGT 1 B1 6 pieces, squamous mucosa up to ~0.5mm, ~30% thickness 5.7 Esophagus Esophagus - Mucosa 0006920 813 1042 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984529 352924 0.974254 0.989632 0.821729 21757 1 76 0.00387917 158 0 7.67457e+07 0.025498 907432 7.75497e+07 1.11157e+07 21774 3.80252e+07 0 0.152525 0.989632 0.813209 7.67457e+07 0.00548555 1.71423e+07 1.03528e+07 1.73439e+07 188 1.75076e+07 1.13677e+07 0.00467822 1.736e+07 49.7884 0.0117013 0.994736 0 50.2923 GTEX-1EX96-2526-SM-7RHGW 1 B1 2 pieces, moderate interstitial fibrosis/ chronic ischemia 5.6 Heart Heart - Left Ventricle 0006566 817 1038 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.987853 116125 0.989035 0.990739 0.847636 18796 1 76 0.00209823 367 0 1.09014e+08 0.0109266 1.0515e+07 1.10033e+08 1.0425e+07 18802 5.42654e+07 0 0.141399 0.990739 0.839786 1.09014e+08 0.00401293 2.39568e+07 5.28613e+07 2.41522e+07 394 2.41972e+07 4.20171e+06 0.00305279 2.41066e+07 49.9062 0.0955628 0.993625 0 50.2031 GTEX-1EX96-2626-SM-9MQJV 1 B1 2 pieces, no abnormalities 6.1 Heart Heart - Atrial Appendage 0006631 819 1036 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984878 357706 0.978684 0.987279 0.797963 21979 1 76 0.00544692 146 0 7.35924e+07 0.0211209 3.06783e+06 7.45406e+07 8.62003e+06 22006 3.66118e+07 0 0.180721 0.987279 0.787812 7.35924e+07 0.00694879 1.5924e+07 1.06998e+07 1.62855e+07 177 1.63289e+07 8.52133e+06 0.00619603 1.60354e+07 49.5464 0.0411565 0.98968 0 50.5611 GTEX-1EX96-2726-SM-7SB88 1 B1 6 pieces, minimal atherosis 6.6 Blood Vessel Artery - Aorta 0001496 824 1031 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987209 380488 0.962439 0.989627 0.544264 24817 1 76 0.00337459 136 0 9.3421e+07 0.0372069 194902 9.44002e+07 1.03785e+07 24899 4.63737e+07 0 0.418175 0.989627 0.538618 9.3421e+07 0.00487417 2.04355e+07 1.22601e+07 2.06003e+07 145 2.06808e+07 1.05974e+07 0.00412255 2.05769e+07 49.8742 0.00206463 0.992045 0 50.2009 GTEX-1EX96-2826-SM-7PBZQ 1 B1 4 pieces, calcified atherosis with ~50% luminal obstruction, rep delineated; adherent nubbins of fat up to ~2mm 6 Blood Vessel Artery - Coronary 0001621 827 1028 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.981728 179067 0.97201 0.985877 0.702766 24822 1 76 0.0043984 169 0 9.65229e+07 0.0244049 650625 9.79056e+07 1.32662e+07 24867 4.77108e+07 0 0.269244 0.985877 0.692842 9.65229e+07 0.00671623 2.14815e+07 2.13436e+07 2.15836e+07 202 2.17501e+07 1.23622e+07 0.00555244 2.17087e+07 49.9524 0.00664543 0.990027 0 50.1185 GTEX-1EX96-2926-SM-7MXVD 2 B1 1 piece, mainly adenohypophysis, moderately autolyzed; 4x2mm portion of neurohypophysis, delineated 5.6 Pituitary Pituitary 0000007 848 1007 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976409 211953 0.958528 0.985935 0.755998 25543 1 76 0.00306155 159 0 8.09184e+07 0.0412253 625534 8.20728e+07 1.33745e+07 25586 3.99866e+07 0 0.20253 0.985935 0.745365 8.09184e+07 0.00425566 1.72913e+07 1.32568e+07 1.7414e+07 200 1.77293e+07 1.13174e+07 0.00365284 1.76864e+07 49.9394 0.0076217 0.995461 0 50.1769 GTEX-1EX96-3026-SM-7RHH5 1 B1 2 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 850 1005 BP-58067 RNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99221 317779 0.964854 0.994265 0.821178 24824 1 76 0.00240553 268 0 9.01796e+07 0.0348279 3.8016e+06 9.06998e+07 8.66393e+06 24847 4.48897e+07 0 0.143675 0.994265 0.816469 9.01796e+07 0.00370679 1.97133e+07 1.43632e+07 2.00525e+07 326 1.99919e+07 1.03097e+07 0.00305482 1.99326e+07 49.9257 0.0419141 0.99632 0 50.4266 GTEX-1EX96-3126-SM-9JGGC 1 B1 2 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 852 1003 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992858 504660 0.945966 0.994039 0.715747 24933 1 76 0.00217016 270 0 1.14441e+08 0.0537137 2.31603e+06 1.15127e+08 5.6645e+06 24983 5.70262e+07 0 0.230219 0.994039 0.711481 1.14441e+08 0.00306729 2.46782e+07 2.36964e+07 2.49857e+07 319 2.49845e+07 1.22903e+07 0.00261819 2.48e+07 49.8147 0.0201172 0.995219 0 50.3096 GTEX-1F48J-0001-SM-EVR39 C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 791 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990514 1.40227e+06 0.968821 0.992499 0.825786 23166 1 76 0.00229311 290 0 1.51338e+08 0.0303814 760448 1.52482e+08 1.1772e+07 23212 7.53132e+07 0 0.143035 0.992499 0.819592 1.51338e+08 0.00328933 3.36946e+07 1.81601e+07 3.38894e+07 327 3.39673e+07 3.63164e+07 0.00279022 3.3899e+07 49.9497 0.00498714 0.994484 0 50.1442 GTEX-1F48J-0003-SM-7J3AS C1 Blood Whole Blood 0013756 791 BP-55862 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2014 LCSET-6780,LCSET-7187 05/08/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F48J-0003-SM-7MA75 C1 Blood Whole Blood 0013756 791 BP-55862 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F48J-0006-SM-ARL6W C1 7.6 Blood Whole Blood 0013756 791 BP-55969 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.986203 2.07598e+06 0.913112 0.986776 0.716732 18064 1 76 0.00217813 114 0 6.81996e+07 0.0864569 436034 6.91135e+07 2.7017e+06 18078 3.39073e+07 0 0.19638 0.986776 0.707254 6.81996e+07 0.00271841 1.4304e+07 7.33285e+07 1.44544e+07 123 1.45721e+07 1.28714e+07 0.00244812 1.42591e+07 49.4571 0.00630895 0.987349 0 50.2615 GTEX-1F48J-0008-SM-EWRMD C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 892 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.991061 402717 0.984359 0.993711 0.871761 21071 1 76 0.00196779 295 0 1.1933e+08 0.0153305 241493 1.20086e+08 8.08477e+06 21088 5.94139e+07 0 0.112598 0.993711 0.866279 1.1933e+08 0.00256378 2.68818e+07 1.01951e+07 2.71165e+07 310 2.72251e+07 3.16815e+07 0.00225802 2.70538e+07 49.8422 0.00201101 0.996362 0 50.2174 GTEX-1F48J-0011-R10a-SM-9QEIB C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 805 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989955 477586 0.963184 0.993209 0.849459 24116 1 76 0.00175934 271 0 9.27367e+07 0.0363835 2.48324e+06 9.33707e+07 4.68469e+06 24136 4.61247e+07 0 0.113725 0.993209 0.84369 9.27367e+07 0.00374744 2.02779e+07 1.21754e+07 2.04579e+07 305 2.05359e+07 1.29248e+07 0.00275013 2.04634e+07 49.9116 0.0265955 0.996464 0 50.221 GTEX-1F48J-0011-R11b-SM-9OSWV C1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 805 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990486 511969 0.94741 0.992696 0.758439 24358 1 76 0.0028088 271 0 9.61851e+07 0.0521712 1.51789e+06 9.68928e+07 1.02658e+07 24394 4.78479e+07 0 0.188972 0.992696 0.752899 9.61851e+07 0.0033967 2.06629e+07 1.55394e+07 2.0892e+07 263 2.09363e+07 1.18566e+07 0.0031021 2.08092e+07 49.8477 0.0156657 0.994905 0 50.2756 GTEX-1F48J-0011-R1a-SM-9QEIC C1, A1 7.7 Brain Brain - Hippocampus 0001954 805 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990464 654275 0.953627 0.993633 0.833255 24248 1 76 0.00175759 271 0 8.99127e+07 0.0459707 2.62009e+06 9.04889e+07 4.50979e+06 24272 4.47251e+07 0 0.120372 0.993633 0.82795 8.99127e+07 0.00379714 1.95402e+07 2.06477e+07 1.96958e+07 301 1.98246e+07 1.15911e+07 0.00277411 1.96652e+07 49.7981 0.0289548 0.996802 0 50.1984 GTEX-1F48J-0011-R2a-SM-CL535 C1, A1 6.6 Brain Brain - Substantia nigra 0002038 805 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991573 562908 0.971605 0.993553 0.855581 23315 1 76 0.00246564 373 0 1.05107e+08 0.0281903 7.29182e+06 1.05789e+08 1.37549e+07 23337 5.23249e+07 0 0.116024 0.993553 0.850065 1.05107e+08 0.003823 2.28735e+07 1.8834e+07 2.39331e+07 409 2.37105e+07 1.10031e+07 0.00314297 2.32547e+07 49.5147 0.0689276 0.995533 0 51.1318 GTEX-1F48J-0011-R3b-SM-9OSVY C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 805 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99224 423343 0.965982 0.994514 0.85223 24639 1 76 0.00239903 272 0 1.0674e+08 0.0336482 4.95929e+06 1.07328e+08 1.01543e+07 24654 5.31395e+07 0 0.113752 0.994514 0.847555 1.0674e+08 0.00325055 2.33857e+07 1.82883e+07 2.36727e+07 319 2.37149e+07 1.33348e+07 0.00282381 2.35537e+07 49.8295 0.0462067 0.996789 0 50.3049 GTEX-1F48J-0011-R4b-SM-9OSVX C1, A1 6.7 Brain Brain - Amygdala 0001876 805 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989093 416266 0.963502 0.992653 0.856889 23029 1 76 0.00238211 269 0 7.58887e+07 0.0362459 3.8279e+06 7.64503e+07 7.63342e+06 23041 3.77331e+07 0 0.106613 0.992653 0.850593 7.58887e+07 0.00363 1.65426e+07 1.47805e+07 1.68004e+07 263 1.67929e+07 8.46521e+06 0.00300382 1.67907e+07 49.9967 0.0500704 0.996213 0 50.3866 GTEX-1F48J-0011-R5b-SM-9OSVZ C1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 805 BP-59532 RNA isolation_PAXgene Tissue miRNA 01/12/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992 494116 0.96449 0.994187 0.833861 23906 1 76 0.00243237 270 0 9.77858e+07 0.0352792 5.66263e+06 9.83576e+07 9.68477e+06 23922 4.86866e+07 0 0.130629 0.994187 0.829013 9.77858e+07 0.00322885 2.12391e+07 2.43498e+07 2.16218e+07 314 2.15259e+07 1.00536e+07 0.00282973 2.15077e+07 49.9788 0.0575719 0.996374 0 50.4464 GTEX-1F48J-0011-R6a-SM-CJI2F C1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 805 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99367 794749 0.961541 0.994797 0.82626 23927 1 76 0.00198013 270 0 8.34731e+07 0.0381964 5.07241e+06 8.39097e+07 5.03909e+06 23950 4.15757e+07 0 0.135281 0.994797 0.821961 8.34731e+07 0.00235387 1.81145e+07 1.89669e+07 1.85507e+07 307 1.86042e+07 9.93761e+06 0.00216679 1.81497e+07 49.3817 0.0604509 0.995924 0 50.5948 GTEX-1F48J-0011-R7a-SM-CJI2G C1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 805 BP-69072 RNA isolation_PAXgene Tissue miRNA 11/16/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992442 1.27073e+06 0.95687 0.993901 0.820026 22927 1 76 0.00190443 370 0 9.71947e+07 0.042932 8.06983e+06 9.77911e+07 6.04173e+06 22942 4.83913e+07 0 0.136844 0.993901 0.815024 9.71947e+07 0.0022895 2.06387e+07 4.38849e+07 2.14166e+07 369 2.14653e+07 9.05666e+06 0.00209668 2.07194e+07 49.1159 0.0825211 0.995359 0 50.9249 GTEX-1F48J-0011-R8a-SM-9OSWW C1, A1 7.1 Brain Brain - Hypothalamus 0001898 805 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991422 439129 0.96368 0.994095 0.830402 25584 1 76 0.00237394 374 0 1.08689e+08 0.0359778 3.56553e+06 1.09335e+08 1.05159e+07 25614 5.40778e+07 0 0.133278 0.994095 0.825499 1.08689e+08 0.00360943 2.38292e+07 1.67041e+07 2.41337e+07 333 2.41264e+07 1.36189e+07 0.00299002 2.40902e+07 49.9625 0.0326111 0.996768 0 50.3174 GTEX-1F48J-0126-SM-7P8TT 1 C1 6 pieces; atrophic and edematous; well trimmed 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 891 451 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.943301 314675 0.973669 0.969107 0.828479 25148 1 76 0.00426306 190 0 8.88595e+07 0.026009 286898 9.16921e+07 1.42642e+07 25173 4.31156e+07 0 0.145189 0.969107 0.802885 8.88595e+07 0.0078557 1.88896e+07 1.00719e+07 1.90402e+07 192 2.02254e+07 1.74136e+07 0.00601155 1.99807e+07 49.6957 0.00312893 0.994913 0 50.1986 GTEX-1F48J-0226-SM-7SB82 1 C1 2 pieces; minimal fibrous content 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 894 449 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989554 298150 0.966749 0.992324 0.714354 25291 1 76 0.00263589 206 0 9.41857e+07 0.032962 438865 9.49142e+07 1.02449e+07 25341 4.68451e+07 0 0.252395 0.992324 0.70887 9.41857e+07 0.00446655 2.05522e+07 1.02464e+07 2.0772e+07 203 2.08317e+07 1.4277e+07 0.00354867 2.07395e+07 49.8891 0.00462381 0.995094 0 50.266 GTEX-1F48J-0426-SM-7SB8S 1 C1 2 pieces; 10% external fat on 1 piece 6.4 Nerve Nerve - Tibial 0001323 899 445 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988938 284879 0.951494 0.991532 0.613119 25020 1 76 0.00287424 132 0 6.35827e+07 0.0482886 262226 6.41257e+07 7.43967e+06 25070 3.16069e+07 0 0.338375 0.991532 0.607927 6.35827e+07 0.00431102 1.37443e+07 8.72989e+06 1.38932e+07 122 1.39206e+07 7.64541e+06 0.00359076 1.38758e+07 49.9194 0.00408925 0.994126 0 50.2694 GTEX-1F48J-0526-SM-9WYSX 1 C1 2 pieces; moderate atrophy; 10% & 20% internal fat 8.4 Muscle Muscle - Skeletal 0011907 903 441 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994452 193551 0.975647 0.995479 0.832723 21585 1 76 0.0021287 283 0 9.23699e+07 0.0240733 950378 9.27893e+07 6.22693e+06 21609 4.60637e+07 0 0.142924 0.995479 0.828959 9.23699e+07 0.00368134 1.99584e+07 9.95082e+06 2.00916e+07 266 2.00874e+07 1.85264e+07 0.00290422 2.00451e+07 49.9473 0.0102423 0.996506 0 50.1662 GTEX-1F48J-0726-SM-7RHGS 1 C1 6 pieces; atrophic and edematous; well trimmed 8.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 921 424 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990987 175010 0.978858 0.99366 0.821036 23614 1 76 0.00246946 227 0 9.188e+07 0.0208145 304919 9.24663e+07 9.43223e+06 23641 4.57197e+07 0 0.157822 0.99366 0.81583 9.188e+07 0.00374545 2.02155e+07 9.11998e+06 2.04199e+07 246 2.04649e+07 1.81034e+07 0.00310574 2.04091e+07 49.9317 0.00329762 0.996332 0 50.2515 GTEX-1F48J-0826-SM-9WPOD 2 C1 2 pieces; mild emphysema 6.6 Lung Lung 0008952 924 421 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986717 236788 0.969285 0.98847 0.744675 24931 1 76 0.00668141 125 0 7.03935e+07 0.0303786 240030 7.12146e+07 1.15524e+07 24970 3.50274e+07 0 0.22461 0.98847 0.736089 7.03935e+07 0.00715818 1.55187e+07 7.79017e+06 1.56077e+07 128 1.56404e+07 1.21215e+07 0.00691937 1.56044e+07 49.9423 0.00337052 0.990223 0 50.143 GTEX-1F48J-0926-SM-7P8PZ 1 C1 2 pieces; no lesions 5.7 Thyroid Thyroid 0002046 928 418 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988811 223835 0.961225 0.990793 0.725748 24415 1 76 0.00301712 159 0 8.14214e+07 0.0385313 473687 8.2178e+07 1.08544e+07 24457 4.05288e+07 0 0.235477 0.990793 0.719067 8.14214e+07 0.00410593 1.76416e+07 9.00071e+06 1.79058e+07 185 1.79603e+07 1.09873e+07 0.00356044 1.7737e+07 49.6872 0.00576416 0.992776 0 50.3716 GTEX-1F48J-1026-SM-7P8SO 1 C1 2 pieces; no scars; 5% internal fat in 1 piece 5.8 Heart Heart - Left Ventricle 0006566 930 416 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.943047 272276 0.976555 0.969324 0.827816 21692 1 76 0.00422254 193 0 7.99429e+07 0.0233424 4.01924e+06 8.24728e+07 1.27549e+07 21708 3.87838e+07 0 0.148739 0.969324 0.802422 7.99429e+07 0.00804102 1.75175e+07 2.29067e+07 1.67545e+07 254 1.79438e+07 6.98146e+06 0.00608002 1.81357e+07 50.2659 0.0487341 0.995601 0 48.8868 GTEX-1F48J-1126-SM-9WYSY 1 C1 2 pieces; 50% & 20% fibrofatty content 6.5 Heart Heart - Atrial Appendage 0006631 933 414 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992533 160080 0.973101 0.994407 0.763521 23817 1 76 0.00246102 198 0 8.43158e+07 0.0265505 1.66664e+06 8.479e+07 5.87655e+06 23855 4.19929e+07 0 0.20958 0.994407 0.75925 8.43158e+07 0.00431302 1.84516e+07 9.97331e+06 1.87297e+07 237 1.87335e+07 1.12391e+07 0.00338528 1.85896e+07 49.8073 0.0196561 0.996281 0 50.374 GTEX-1F48J-1326-SM-7RHGJ 1 C1 6 pieces; mild linear fibrous plaques; well trimmed 6.3 Blood Vessel Artery - Aorta 0001496 943 405 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99026 199830 0.972533 0.992677 0.774653 23600 1 76 0.00261798 278 0 1.04764e+08 0.0270891 329183 1.05537e+08 1.03866e+07 23635 5.20944e+07 0 0.19788 0.992677 0.768981 1.04764e+08 0.00421129 2.25283e+07 9.67984e+06 2.26664e+07 279 2.26904e+07 1.85143e+07 0.0034127 2.27494e+07 50.065 0.00311913 0.995094 0 50.1527 GTEX-1F48J-1426-SM-7P8SC 1 C1 6 pieces; submucosal stroma comprises up to 40% 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 945 403 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.927927 259234 0.967718 0.960958 0.785336 24274 1 76 0.00455173 132 0 7.18304e+07 0.0320639 1.04103e+06 7.47488e+07 1.23437e+07 24299 3.45581e+07 0 0.182382 0.960958 0.754675 7.18304e+07 0.00912456 1.51622e+07 9.67738e+06 1.5161e+07 151 1.63633e+07 1.02439e+07 0.00675956 1.6279e+07 49.8708 0.0139271 0.993988 0 49.998 GTEX-1F48J-1626-SM-9WPOE 1 C1 6 pieces; well dissected 6.2 Esophagus Esophagus - Muscularis 0004648 948 401 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987203 215951 0.968581 0.988868 0.751635 24220 1 76 0.00646723 137 0 7.58639e+07 0.0311834 665636 7.67179e+07 1.19896e+07 24260 3.77631e+07 0 0.216945 0.988868 0.743268 7.58639e+07 0.00685765 1.65233e+07 8.35753e+06 1.66455e+07 150 1.66562e+07 1.10166e+07 0.00666211 1.66313e+07 49.9626 0.00867641 0.990533 0 50.1842 GTEX-1F48J-1826-SM-7SB8T 1 C1 2 pieces; 5% fibrous content 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 955 395 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987502 239115 0.968567 0.990256 0.652312 23618 1 76 0.00301819 122 0 6.32083e+07 0.0311428 290267 6.38303e+07 7.31016e+06 23663 3.13925e+07 0 0.316254 0.990256 0.645956 6.32083e+07 0.00481279 1.39128e+07 7.92194e+06 1.40837e+07 130 1.41279e+07 7.97465e+06 0.003913 1.40408e+07 49.8454 0.00454748 0.99301 0 50.3052 GTEX-1F48J-2126-SM-7PBYC 2 C1 2 pieces; 50% & 40% external fat content 5.9 Adrenal Gland Adrenal Gland 0002369 966 386 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 EXCLUDE 0.978311 149780 0.983369 0.981875 0.824716 21484 1 76 0.00280385 368 0 1.14049e+08 0.0165031 9.06356e+06 1.16155e+08 1.67112e+07 21504 5.67232e+07 0 0.158653 0.981875 0.809768 1.14049e+08 0.00448324 2.45629e+07 5.26319e+07 2.53894e+07 349 2.52369e+07 6.88724e+06 0.00364049 2.49879e+07 49.7522 0.0780301 0.98544 0 50.8273 GTEX-1F48J-2226-SM-7MXTN 2 C1 6 pieces; occasional sclerosed glomeruli and arteriolar changes 5.8 Kidney Kidney - Cortex 0001225 968 384 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.985875 145610 0.975575 0.990932 0.822841 23811 1 76 0.0023106 268 0 9.67017e+07 0.0242794 5.36715e+06 9.75866e+07 9.2598e+06 23832 4.80265e+07 0 0.152734 0.990932 0.81538 9.67017e+07 0.00335074 2.12268e+07 2.50745e+07 2.1268e+07 328 2.13403e+07 9.00067e+06 0.00282802 2.15833e+07 50.283 0.0549989 0.99599 0 50.0485 GTEX-1F48J-2326-SM-7MKG3 1 C1 2 pieces; atrophic with 50% external fibrous content in 1 piece 6.5 Ovary Ovary 0000992 974 378 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98354 341343 0.958717 0.988987 0.717974 23365 1 76 0.00416342 130 0 6.87064e+07 0.0410456 146971 6.94715e+07 1.09328e+07 23404 3.40446e+07 0 0.240742 0.988987 0.710067 6.87064e+07 0.00487128 1.46776e+07 1.54198e+07 1.50757e+07 126 1.52517e+07 1.26466e+07 0.0045154 1.48651e+07 49.3582 0.00211556 0.994434 0 50.669 GTEX-1F48J-2526-SM-7P8TU 2 C1 6 pieces; epithelium largely sloughed 5.7 Vagina Vagina 0000996 978 376 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.931615 319087 0.965183 0.962405 0.73573 25861 1 76 0.00450799 144 0 8.2613e+07 0.0345218 369437 8.58401e+07 1.374e+07 25903 3.98303e+07 0 0.229453 0.962405 0.708071 8.2613e+07 0.0090272 1.74065e+07 1.18926e+07 1.76083e+07 151 1.89082e+07 1.34591e+07 0.0066953 1.86507e+07 49.6571 0.00430378 0.993196 0 50.2881 GTEX-1F48J-2726-SM-7P8PW 1 C1 4 pieces 6.8 Brain Brain - Cerebellum 0002037 980 375 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987878 984940 0.914877 0.990324 0.706577 23931 1 76 0.00294255 154 0 7.73973e+07 0.0847248 1.35271e+06 7.81535e+07 1.05745e+07 23962 3.84885e+07 0 0.2083 0.990324 0.69974 7.73973e+07 0.0040794 1.59613e+07 4.55882e+07 1.64583e+07 175 1.65411e+07 9.26483e+06 0.00350957 1.60513e+07 49.2486 0.0173084 0.99277 0 50.7666 GTEX-1F48J-2826-SM-7P8R4 1 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 982 373 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989675 688717 0.963623 0.992124 0.847777 24664 1 76 0.00271502 272 0 1.12903e+08 0.0359048 3.40514e+06 1.13799e+08 1.51464e+07 24684 5.61739e+07 0 0.115846 0.992124 0.8411 1.12903e+08 0.00381378 2.46086e+07 2.21291e+07 2.51163e+07 302 2.51362e+07 1.6064e+07 0.00326304 2.4828e+07 49.6915 0.0299223 0.994573 0 50.5105 GTEX-1F48J-2926-SM-7MKG4 1 C1 1 piece; all anterior lobe 6.9 Pituitary Pituitary 0000007 983 372 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98498 431777 0.96155 0.990278 0.787577 25061 1 76 0.00371693 165 0 8.8133e+07 0.0381026 299041 8.89983e+07 1.27118e+07 25087 4.3693e+07 0 0.173973 0.990278 0.77992 8.8133e+07 0.00496563 1.83991e+07 1.97393e+07 1.87026e+07 181 1.89233e+07 1.65946e+07 0.00433794 1.86168e+07 49.5917 0.00336008 0.995576 0 50.409 GTEX-1F52S-0001-SM-EVR36 C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 843 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988782 1.96403e+06 0.959749 0.990699 0.804581 22598 1 76 0.00259993 283 0 1.29222e+08 0.0377342 744015 1.30435e+08 9.79535e+06 22636 6.41912e+07 0 0.155167 0.990699 0.797098 1.29222e+08 0.00368517 2.85343e+07 2.35294e+07 2.87358e+07 315 2.87645e+07 2.90005e+07 0.0031415 2.87384e+07 49.9773 0.00570409 0.992617 0 50.176 GTEX-1F52S-0004-SM-7J3AY C1 Blood Whole Blood 0013756 843 BP-55921 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/13/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F52S-0004-SM-7MA7B C1 Blood Whole Blood 0013756 843 BP-55921 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/13/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F52S-0006-SM-ARL6X C1 7.9 Blood Whole Blood 0013756 843 BP-55969 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.986386 1.47772e+06 0.929199 0.987023 0.736927 17128 1 76 0.00183038 94 0 6.56864e+07 0.0694187 320195 6.655e+07 2.60378e+06 17132 3.25892e+07 0 0.192272 0.987023 0.727364 6.56864e+07 0.0023778 1.44791e+07 8.81899e+07 1.46731e+07 108 1.48109e+07 1.54609e+07 0.00210391 1.44159e+07 49.3242 0.00481135 0.98766 0 50.3329 GTEX-1F52S-0008-SM-EWRME C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 987 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.990386 493822 0.983074 0.993431 0.856967 21148 1 76 0.00199044 292 0 9.98781e+07 0.0165885 312136 1.00539e+08 6.7347e+06 21171 4.97042e+07 0 0.126106 0.993431 0.851338 9.98781e+07 0.00273211 2.23988e+07 8.95465e+06 2.26309e+07 269 2.27526e+07 2.56416e+07 0.00235146 2.25454e+07 49.7713 0.00310464 0.996476 0 50.2577 GTEX-1F52S-0011-R11a-SM-CJI23 C1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 872 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992213 1.47452e+06 0.946833 0.99345 0.753979 23940 1 76 0.00212592 271 0 1.08039e+08 0.0527268 2.25258e+06 1.08751e+08 6.52429e+06 23979 5.37626e+07 0 0.192853 0.99345 0.749041 1.08039e+08 0.00263126 2.32686e+07 2.27456e+07 2.35302e+07 320 2.36949e+07 1.37529e+07 0.00237828 2.32179e+07 49.4916 0.0207132 0.994688 0 50.2795 GTEX-1F52S-0011-R1a-SM-9OSX9 C1, A1 6.3 Brain Brain - Hippocampus 0001954 872 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 EXCLUDE 0.989388 435463 0.959289 0.992536 0.831475 23826 1 76 0.00229163 369 0 1.09814e+08 0.0405546 1.33767e+07 1.10639e+08 1.06934e+07 23847 5.4628e+07 0 0.127814 0.992536 0.825269 1.09814e+08 0.00352681 2.3612e+07 3.50362e+07 2.43906e+07 343 2.41812e+07 6.98474e+06 0.00290726 2.40806e+07 49.8958 0.120903 0.995685 0 50.8109 GTEX-1F52S-0011-R3a-SM-CKZNI C1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 872 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991327 344785 0.966888 0.99347 0.856807 22299 1 76 0.00181254 269 0 7.66475e+07 0.032872 7.66478e+06 7.71514e+07 7.71894e+06 22319 3.81541e+07 0 0.110082 0.99347 0.851212 7.66475e+07 0.00303843 1.68563e+07 1.30447e+07 1.72059e+07 311 1.71302e+07 7.423e+06 0.00242416 1.70573e+07 49.8933 0.0993473 0.995613 0 50.5132 GTEX-1F52S-0011-R5a-SM-CJI22 C1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 872 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991886 927344 0.966328 0.993192 0.828026 23109 1 76 0.00174655 371 0 1.06865e+08 0.0334437 1.01279e+07 1.07598e+08 6.42246e+06 23130 5.32309e+07 0 0.138302 0.993192 0.822389 1.06865e+08 0.00222699 2.29357e+07 4.05367e+07 2.37407e+07 349 2.35694e+07 9.98959e+06 0.00198645 2.32161e+07 49.6225 0.0941275 0.994497 0 50.8623 GTEX-1F52S-0011-R7b-SM-9QEH8 C1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 872 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.988735 510901 0.967611 0.992139 0.833349 22077 1 76 0.00157194 370 0 1.19516e+08 0.0322685 1.59512e+07 1.20463e+08 5.98792e+06 22094 5.94656e+07 0 0.134263 0.992139 0.826798 1.19516e+08 0.00356452 2.56419e+07 4.96505e+07 2.63524e+07 356 2.60715e+07 6.79547e+06 0.00256481 2.62237e+07 50.1455 0.132416 0.995544 0 50.6832 GTEX-1F52S-0011-R8a-SM-9OSXA C1, A1 6.8 Brain Brain - Hypothalamus 0001898 872 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.988891 457948 0.954703 0.992555 0.834913 23794 1 76 0.00234862 370 0 9.47384e+07 0.045125 9.69734e+06 9.54489e+07 9.19596e+06 23816 4.70888e+07 0 0.11979 0.992555 0.828697 9.47384e+07 0.00396208 2.05064e+07 2.71521e+07 2.10338e+07 355 2.09102e+07 6.97092e+06 0.00315237 2.09173e+07 50.0084 0.101597 0.99622 0 50.6349 GTEX-1F52S-0011-R9a-SM-9WG62 C1, A1 6.5 Brain Brain - Spinal cord (cervical c-1) 0006469 872 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990858 206354 0.958646 0.993812 0.824232 21433 1 76 0.00241932 158 0 5.80375e+07 0.0410639 3.52511e+06 5.83989e+07 4.3703e+06 21448 2.88722e+07 0 0.134414 0.993812 0.819131 5.80375e+07 0.00350582 1.28264e+07 7.90432e+06 1.30494e+07 158 1.29635e+07 7.32722e+06 0.00296096 1.30779e+07 50.2195 0.0603626 0.996766 0 50.4308 GTEX-1F52S-0126-SM-9MQJU 1 C1 6 pieces; 10% dermal fat; well trimmed 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 987 788 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985351 266860 0.968985 0.987568 0.783834 23658 1 76 0.00564134 184 0 7.12921e+07 0.0307939 557820 7.21896e+07 8.82905e+06 23682 3.54671e+07 0 0.185152 0.987568 0.774089 7.12921e+07 0.00714728 1.5419e+07 7.50461e+06 1.56119e+07 156 1.56005e+07 1.14097e+07 0.00639262 1.55812e+07 49.9692 0.00772715 0.989784 0 50.3108 GTEX-1F52S-0226-SM-7SB7U 1 C1 2 pieces; <5% fibrous content 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 988 788 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989181 257140 0.964346 0.991686 0.674881 23684 1 76 0.0027393 131 0 6.53777e+07 0.0353681 580975 6.59258e+07 7.51895e+06 23724 3.25008e+07 0 0.289465 0.991686 0.66927 6.53777e+07 0.00438163 1.42778e+07 8.88477e+06 1.44533e+07 135 1.44784e+07 8.92171e+06 0.00355839 1.44111e+07 49.8836 0.00881256 0.994192 0 50.3055 GTEX-1F52S-0426-SM-9MQJW 1 C1 2 pieces; well dissected; no plaques; small, 0.4 mm, adherent blood clot 7.7 Blood Vessel Artery - Tibial 0007610 996 780 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986198 278505 0.97513 0.988357 0.830858 21559 1 76 0.00529792 143 0 6.89803e+07 0.02447 424459 6.97929e+07 8.02562e+06 21576 3.43151e+07 0 0.144272 0.988357 0.821184 6.89803e+07 0.0071223 1.49402e+07 5.75419e+06 1.50429e+07 148 1.50615e+07 1.32672e+07 0.00620812 1.50672e+07 50.0094 0.00608169 0.990516 0 50.1712 GTEX-1F52S-0526-SM-7P8TP 1 C1 2 pieces; no lesions; 5 & 10% fibrovascular content 6 Thyroid Thyroid 0002046 998 779 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.953561 387986 0.962233 0.973719 0.795864 26038 1 76 0.00377674 281 0 1.14987e+08 0.0373656 713045 1.1809e+08 1.57231e+07 26073 5.61163e+07 0 0.16637 0.973719 0.774948 1.14987e+08 0.0074521 2.43258e+07 1.92222e+07 2.47152e+07 300 2.58764e+07 2.16871e+07 0.00557638 2.5449e+07 49.5836 0.00603813 0.993877 0 50.3971 GTEX-1F52S-0826-SM-7P8TQ 1 C1 2 pieces; 5% internal fat content 8.6 Muscle Muscle - Skeletal 0011907 1006 772 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.956473 217063 0.979798 0.976152 0.860079 20761 1 76 0.0038552 179 0 7.48739e+07 0.0199043 1.30927e+06 7.67031e+07 1.12428e+07 20771 3.65955e+07 0 0.119719 0.976152 0.839568 7.48739e+07 0.00684052 1.60404e+07 9.91601e+06 1.60558e+07 166 1.6828e+07 1.59022e+07 0.00531777 1.67022e+07 49.8124 0.0170693 0.995831 0 50.0241 GTEX-1F52S-1326-SM-7SB6Q 1 C1 2 pieces; lobulated fat with minimal fibrous content 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1014 766 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988717 192033 0.97196 0.991422 0.742943 24010 1 76 0.00274501 166 0 8.51371e+07 0.0277366 886751 8.58737e+07 9.22444e+06 24049 4.23153e+07 0 0.229017 0.991422 0.73657 8.51371e+07 0.00440766 1.86131e+07 9.85196e+06 1.88238e+07 182 1.88551e+07 1.41069e+07 0.00357406 1.88097e+07 49.9396 0.0103262 0.994128 0 50.2814 GTEX-1F52S-1426-SM-7P8PU 2 C1 6 pieces; moderately sloughed epithelium with several large bare spots 5.6 Esophagus Esophagus - Mucosa 0006920 1015 766 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990559 275171 0.971402 0.992533 0.815965 23628 1 76 0.00303555 372 0 1.03836e+08 0.0284368 3.47394e+06 1.04617e+08 1.56101e+07 23651 5.16806e+07 0 0.155438 0.992533 0.809872 1.03836e+08 0.00389815 2.30352e+07 1.43069e+07 2.36737e+07 341 2.36841e+07 1.22837e+07 0.00346599 2.32257e+07 49.5115 0.0332062 0.994506 0 50.6835 GTEX-1F52S-2226-SM-7MXVE 1 C1 2 pieces; atrophic with large corpora albicans comprising 40% 5.8 Ovary Ovary 0000992 1026 759 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.979262 122786 0.974737 0.986341 0.782917 22881 1 76 0.00273992 161 0 7.45859e+07 0.0249626 194293 7.56187e+07 1.02348e+07 22913 3.69361e+07 0 0.191821 0.986341 0.772223 7.45859e+07 0.00390777 1.62824e+07 1.21246e+07 1.63726e+07 151 1.65518e+07 1.72452e+07 0.00331965 1.66169e+07 50.0981 0.00256938 0.99342 0 50.1381 GTEX-1F52S-2926-SM-7MKGA 1 C1 6 pieces; 20% dermal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1038 751 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983905 444156 0.976875 0.989316 0.8283 25896 1 76 0.00399774 406 0 1.43673e+08 0.0228015 1.41138e+06 1.45225e+08 2.27031e+07 25934 7.11947e+07 0 0.148575 0.989316 0.81945 1.43673e+08 0.00488126 3.11834e+07 1.63597e+07 3.17362e+07 350 3.2047e+07 2.58438e+07 0.00443708 3.16093e+07 49.6563 0.00971858 0.994727 0 50.4393 GTEX-1F52S-3026-SM-7P8PV 2 C1 4 pieces; foci of adherent meninges; autolysis varies from 1 to 2 6.7 Brain Brain - Cerebellum 0002037 1041 748 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.989471 789441 0.939897 0.992063 0.725255 24218 1 76 0.00295393 268 0 1.0203e+08 0.059772 3.05421e+06 1.02847e+08 1.43109e+07 24253 5.07315e+07 0 0.214642 0.992063 0.719499 1.0203e+08 0.00429657 2.17979e+07 2.7391e+07 2.21469e+07 283 2.22254e+07 1.04541e+07 0.0036235 2.19542e+07 49.6931 0.0296967 0.994655 0 50.3971 GTEX-1F52S-3126-SM-7PC3M 1 C1 4 pieces 6 Brain Brain - Cortex 0001870 1043 747 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989093 758753 0.957891 0.991896 0.837447 22699 1 76 0.00321891 369 0 9.40955e+07 0.0418501 9.76902e+06 9.48643e+07 1.59837e+07 22711 4.67535e+07 0 0.120444 0.991896 0.83066 9.40955e+07 0.00416908 2.03434e+07 3.84738e+07 2.08123e+07 340 2.08096e+07 8.43711e+06 0.00369265 2.0581e+07 49.7239 0.102979 0.994698 0 50.5697 GTEX-1F52S-3226-SM-9JGHR 2 C1 1 piece; adeno:neurohypophysis= 60:40% 6.9 Pituitary Pituitary 0000007 1043 747 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993827 344303 0.959392 0.994928 0.749531 26944 1 76 0.00206256 278 0 1.4924e+08 0.0403117 823959 1.50001e+08 7.23737e+06 27010 7.43962e+07 0 0.209862 0.994928 0.745729 1.4924e+08 0.00300912 3.01891e+07 1.81123e+07 3.04039e+07 328 3.04338e+07 2.54346e+07 0.00253532 3.03059e+07 49.8947 0.00549302 0.996029 0 50.1772 GTEX-1F5PK-0001-SM-EVR37 B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -188 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989237 3.50575e+06 0.93971 0.991176 0.78628 22845 1 76 0.00256494 218 0 9.85175e+07 0.0591706 436093 9.93945e+07 7.51476e+06 22872 4.90155e+07 0 0.15343 0.991176 0.779342 9.85175e+07 0.00375041 2.126e+07 1.34962e+07 2.14429e+07 233 2.14792e+07 2.21689e+07 0.00315652 2.13978e+07 49.9051 0.0043875 0.993115 0 50.2141 GTEX-1F5PK-0003-SM-7J3AQ B1 Blood Whole Blood 0013756 -188 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F5PK-0003-SM-7MA73 B1 Blood Whole Blood 0013756 -188 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F5PK-0005-SM-A96RM B1 8 Blood Whole Blood 0013756 -188 BP-55969 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991231 1.33901e+06 0.927043 0.992484 0.771998 16559 1 76 0.00217558 110 0 5.73339e+07 0.0724967 274747 5.77681e+07 1.8846e+06 16562 2.85685e+07 0 0.155045 0.992484 0.766195 5.73339e+07 0.00282562 1.22614e+07 6.13177e+07 1.23479e+07 112 1.23706e+07 1.20026e+07 0.00250019 1.23611e+07 49.9807 0.00475603 0.993736 0 50.1758 GTEX-1F5PK-0326-SM-9KNUD 1 B1 2 pieces; focal mild interstitial fibrosis enlarged nuclei; 1 piece has 10% internal & external fat content 7.9 Heart Heart - Left Ventricle 0006566 134 1070 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994559 198508 0.984304 0.99557 0.871403 20959 1 76 0.00246019 269 0 1.1237e+08 0.0154625 3.45005e+06 1.1287e+08 1.29352e+07 20978 5.60448e+07 0 0.112902 0.99557 0.867543 1.1237e+08 0.00313377 2.45232e+07 1.85969e+07 2.50233e+07 314 2.48363e+07 1.81419e+07 0.00279664 2.47879e+07 49.9512 0.0305665 0.996582 0 50.5046 GTEX-1F5PK-0426-SM-7RHHZ 1 B1 2 pieces; heavily calcified atheromatous plaques; 50% external fat; minimal medial layer; limited value 7.1 Blood Vessel Artery - Coronary 0001621 139 1065 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992541 153325 0.975965 0.994258 0.849641 23651 1 76 0.00243044 276 0 9.43743e+07 0.0236789 691109 9.49193e+07 9.43412e+06 23668 4.69934e+07 0 0.126324 0.994258 0.844762 9.43743e+07 0.00363824 2.06366e+07 7.75338e+06 2.08304e+07 291 2.07755e+07 1.70915e+07 0.0030333 2.0856e+07 50.0966 0.00728101 0.995974 0 50.2336 GTEX-1F5PK-0526-SM-7MXUA 1 B1 2 pieces; emphysema, fibrosis, vascular sclerosis, focal anthracotic pigment, pigmented alveolar macrophages; large vessels and bronchus comprise 20% of 1 piece 7.2 Lung Lung 0008952 147 1057 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.982678 396110 0.967718 0.989141 0.75554 24594 1 76 0.00279801 140 0 7.02477e+07 0.0320601 543109 7.10189e+07 9.06829e+06 24626 3.48012e+07 0 0.212178 0.989141 0.747336 7.02477e+07 0.00419215 1.53955e+07 6.76685e+06 1.54308e+07 156 1.5591e+07 1.03877e+07 0.00349053 1.56589e+07 50.1087 0.00764739 0.995605 0 50.0573 GTEX-1F5PK-0626-SM-7SB6S 1 B1 6 pieces; moderate atheromatous plaque; focal calcification in 2 pieces 7.6 Blood Vessel Artery - Aorta 0001496 152 1052 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990657 384224 0.968151 0.993192 0.77833 23856 1 76 0.00254965 212 0 9.55273e+07 0.0315258 374931 9.61821e+07 1.07084e+07 23894 4.75125e+07 0 0.189821 0.993192 0.773031 9.55273e+07 0.00426578 2.03901e+07 9.89785e+06 2.06402e+07 221 2.06419e+07 1.65821e+07 0.00340553 2.06233e+07 49.9774 0.00389814 0.995726 0 50.3048 GTEX-1F5PK-0726-SM-7MGXN 1 B1 2 pieces; mild congestion 5.9 Spleen Spleen 0002106 155 1049 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.988442 167097 0.962151 0.990768 0.788074 23796 1 76 0.00360409 139 0 7.17219e+07 0.0357374 769367 7.23902e+07 6.03216e+06 23817 3.56279e+07 0 0.174077 0.990768 0.780798 7.17219e+07 0.00450892 1.57573e+07 1.15883e+07 1.58878e+07 164 1.59164e+07 1.04247e+07 0.00405545 1.58861e+07 49.9523 0.010628 0.993094 0 50.2062 GTEX-1F5PK-0826-SM-7MXVI 2 B1 2 pieces; all cortex; 1 piece has 50% external fat 6.4 Adrenal Gland Adrenal Gland 0002369 170 1034 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976787 132047 0.974648 0.986672 0.803502 22889 1 76 0.00295889 201 0 7.38846e+07 0.02512 2.07012e+06 7.48826e+07 1.2422e+07 22911 3.65155e+07 0 0.171146 0.986672 0.792793 7.38846e+07 0.00404266 1.61162e+07 1.33838e+07 1.61562e+07 208 1.63771e+07 9.93616e+06 0.00349535 1.65494e+07 50.2616 0.0276449 0.996557 0 50.0619 GTEX-1F5PK-1526-SM-7MKGV 0 B1 2 pieces; muscularis propria makes up 20 to 30% in 4 of 6 pieces [labeled]; large submucosal gland comprises 10% of 1 piece, 5% of another piece [labeled] 8.8 Esophagus Esophagus - Mucosa 0006920 200 1004 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986992 317981 0.976986 0.990817 0.829752 22855 1 76 0.00374344 208 0 8.67297e+07 0.0226525 586259 8.75336e+07 1.20383e+07 22872 4.30715e+07 0 0.147234 0.990817 0.822132 8.67297e+07 0.0047155 1.94094e+07 1.31596e+07 1.95915e+07 220 1.97381e+07 1.71427e+07 0.00422759 1.95803e+07 49.7994 0.00669753 0.994642 0 50.2334 GTEX-1F5PK-1626-SM-7PBZU 1 B1 6 pieces; 2 pieces are pure muscularis, 4 have 100%, 80%, 70% & 20% submucosal stroma; 1 has 1 mm squamous carry-over 7.7 Esophagus Esophagus - Muscularis 0004648 205 999 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98693 337717 0.974286 0.991405 0.814762 24569 1 76 0.00280992 283 0 1.08508e+08 0.0254271 625392 1.09449e+08 1.49457e+07 24597 5.38627e+07 0 0.159524 0.991405 0.807759 1.08508e+08 0.00537079 2.36939e+07 9.09786e+06 2.38931e+07 309 2.39906e+07 1.93224e+07 0.00408458 2.40578e+07 50.0699 0.005714 0.995879 0 50.2093 GTEX-1F5PK-1726-SM-7RHHW 1 B1 6 pieces; 3 pieces have mucosa as well as muscularis; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 3 pieces [circled] (as in transverse colon) 7.5 Colon Colon - Sigmoid 0001159 217 987 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.9921 238610 0.976506 0.994089 0.838801 23924 1 76 0.00235835 288 0 1.17004e+08 0.0231667 833513 1.17699e+08 1.1582e+07 23948 5.82657e+07 0 0.137705 0.994089 0.833843 1.17004e+08 0.00366474 2.54002e+07 9.95337e+06 2.5641e+07 318 2.56909e+07 2.23731e+07 0.00301024 2.55676e+07 49.8798 0.00708172 0.996079 0 50.2359 GTEX-1F5PK-1826-SM-7RHHX 1 B1 6 pieces; full thickness specimens; microcystic glandular change [outlined] 7.4 Stomach Stomach 0000945 218 986 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990975 126538 0.981176 0.993016 0.84594 23833 1 76 0.00239175 302 0 1.05771e+08 0.018551 1.56874e+06 1.06515e+08 9.9923e+06 23859 5.26929e+07 0 0.135237 0.993016 0.840032 1.05771e+08 0.00387966 2.37374e+07 3.67286e+07 2.39334e+07 311 2.39005e+07 1.94771e+07 0.00313417 2.39621e+07 50.0643 0.0147278 0.995056 0 50.2056 GTEX-1F5PK-1926-SM-7MXT7 1 B1 6 pieces; foci of edematous, amyloid-like stroma or fibroelastosis in submucosa of 2 pieces, measuring up to 3x1mm, [labeled] like in sigmoid colon; no sign of amyloid in other tissues 7.8 Colon Colon - Transverse 0001157 221 983 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975004 146337 0.973249 0.984781 0.81501 23645 1 76 0.00342192 210 0 8.63074e+07 0.024884 1.5497e+06 8.76412e+07 1.46347e+07 23672 4.25782e+07 0 0.158239 0.984781 0.802606 8.63074e+07 0.00452608 1.90112e+07 1.70447e+07 1.89872e+07 249 1.92824e+07 1.27418e+07 0.00396851 1.94806e+07 50.2557 0.0176823 0.994559 0 49.9684 GTEX-1F5PK-2126-SM-7PC28 2 B1 2 pieces; dense fibrous stroma and ductal proliferation consistent with gynecomastia, especially in 1 piece 8.1 Breast Breast - Mammary Tissue 0008367 229 975 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989017 442991 0.9811 0.992155 0.864385 23050 1 76 0.00308558 379 0 1.09405e+08 0.0186081 1.36682e+06 1.1027e+08 1.59639e+07 23066 5.43412e+07 0 0.116716 0.992155 0.857604 1.09405e+08 0.00493049 2.40567e+07 1.19917e+07 2.4132e+07 336 2.42517e+07 2.26679e+07 0.00400511 2.4267e+07 50.0158 0.0123952 0.995294 0 50.0781 GTEX-1F5PK-2226-SM-7SB6N 1 B1 6 pieces; well trimmed; contains several hair follicles 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 231 973 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989185 284263 0.961116 0.992246 0.708792 24695 1 76 0.00272708 164 0 8.02191e+07 0.038715 606602 8.08461e+07 9.56495e+06 24740 3.98875e+07 0 0.252323 0.992246 0.703296 8.02191e+07 0.00421088 1.74988e+07 1.08607e+07 1.77246e+07 168 1.77613e+07 1.14619e+07 0.00346669 1.76994e+07 49.9128 0.00750317 0.995307 0 50.3205 GTEX-1F5PK-2426-SM-7RHHY 1 B1 6 pieces; well trimmed 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 237 967 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991218 277310 0.971779 0.993569 0.806968 24928 1 76 0.00239817 292 0 1.05404e+08 0.0279266 490373 1.06086e+08 1.00184e+07 24973 5.24476e+07 0 0.164811 0.993569 0.801779 1.05404e+08 0.00425349 2.30511e+07 9.11457e+06 2.31954e+07 328 2.32263e+07 1.80572e+07 0.00332363 2.32604e+07 50.0367 0.00462241 0.995921 0 50.156 GTEX-1F5PK-2526-SM-9MQKN 1 B1 2 pieces; 10% vascular content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 238 966 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985256 946259 0.931529 0.987383 0.758974 22271 1 76 0.00560398 134 0 7.1271e+07 0.0681818 813633 7.21817e+07 8.98977e+06 22287 3.54695e+07 0 0.172555 0.987383 0.749399 7.1271e+07 0.00683756 1.4814e+07 4.08648e+07 1.51795e+07 146 1.51872e+07 1.15491e+07 0.00621944 1.49796e+07 49.656 0.011272 0.989511 0 50.6093 GTEX-1F5PK-2626-SM-7RHH6 1 B1 2 pieces; foci of atrophy some with lymphoid aggregates; 10 & 20% internal fibrovascular fatty content 8.1 Muscle Muscle - Skeletal 0011907 247 957 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992371 152483 0.980548 0.994612 0.873346 21694 1 76 0.00219551 285 0 9.55156e+07 0.0191856 1.29976e+06 9.60331e+07 8.6719e+06 21711 4.75617e+07 0 0.107202 0.994612 0.86864 9.55156e+07 0.00403108 2.10439e+07 9.23042e+06 2.12075e+07 321 2.11809e+07 1.86994e+07 0.00311123 2.1264e+07 50.098 0.0135345 0.996853 0 50.1936 GTEX-1F5PK-2726-SM-9MQLC 1 B1 2 pieces; 30 and 60% fibrofatty content 8.3 Nerve Nerve - Tibial 0001323 249 955 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.988672 204970 0.973191 0.990602 0.802636 23166 1 76 0.00418278 184 0 8.37547e+07 0.0264472 331334 8.45493e+07 7.52666e+06 23197 4.17074e+07 0 0.170554 0.990602 0.795093 8.37547e+07 0.00506562 1.82418e+07 6.93099e+06 1.84033e+07 194 1.84258e+07 1.55198e+07 0.00462334 1.83699e+07 49.9241 0.00391883 0.992531 0 50.2204 GTEX-1F5PK-2826-SM-7PC37 1 B1 2 pieces; severely sclerotic, calcified, ossified plaques; 1 with 60% extraneous fibrofatty tissue 6.8 Blood Vessel Artery - Tibial 0007610 250 954 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986818 385656 0.977027 0.990847 0.847824 22866 1 76 0.00324682 223 0 9.44641e+07 0.0225664 585031 9.53366e+07 1.51996e+07 22882 4.68659e+07 0 0.129203 0.990847 0.840065 9.44641e+07 0.00495734 2.03489e+07 8.07147e+06 2.05508e+07 233 2.06849e+07 1.871e+07 0.0040986 2.05766e+07 49.8688 0.00613648 0.994877 0 50.2468 GTEX-1F5PK-5001-SM-AN46O B1 Heart Heart - Left Ventricle 0006566 134 ChIP-Seq GTEX-1F5PK-5019-SM-AN46Q B1 Muscle Muscle - Skeletal 0011907 246 ChIP-Seq GTEX-1F5PL-0002-SM-7J3AU B1 Blood Whole Blood 0013756 -105 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6780,LCSET-7006 03/30/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F5PL-0002-SM-7MA77 B1 Blood Whole Blood 0013756 -105 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F5PL-0006-SM-A8N7M B1 9.2 Blood Whole Blood 0013756 -105 BP-55969 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.97431 2.19507e+06 0.913755 0.976568 0.735256 19129 1 76 0.0110685 93 0 8.35052e+07 0.0851654 189073 8.55088e+07 1.55135e+07 19133 4.14945e+07 0 0.178499 0.976568 0.718027 8.35052e+07 0.0113853 1.79233e+07 1.55789e+08 1.81478e+07 110 1.81645e+07 1.87927e+07 0.0112265 1.81191e+07 49.9373 0.00221115 0.978827 0 50.3113 GTEX-1F5PL-0008-SM-EWRMC B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 410 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.990769 422885 0.982294 0.993462 0.86267 21655 1 76 0.00202542 292 0 1.1914e+08 0.0174014 259539 1.19924e+08 7.94378e+06 21684 5.93142e+07 0 0.119624 0.993462 0.85703 1.1914e+08 0.00258215 2.66238e+07 1.19514e+07 2.6918e+07 312 2.69867e+07 3.13402e+07 0.00229652 2.68397e+07 49.8635 0.0021642 0.996155 0 50.2747 GTEX-1F5PL-0326-SM-7P8PQ 0 B1 6 pieces, no dermal fat; squamous epithelium is ~ 40-50 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 412 493 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987283 490655 0.972478 0.98998 0.819897 23971 1 76 0.00281403 312 0 1.0763e+08 0.0272393 894722 1.0872e+08 1.42392e+07 23999 5.35358e+07 0 0.152581 0.98998 0.811682 1.0763e+08 0.00464785 2.32767e+07 1.40751e+07 2.35515e+07 321 2.36622e+07 1.79669e+07 0.00372844 2.34348e+07 49.7585 0.00822962 0.992677 0 50.2934 GTEX-1F5PL-0426-SM-7P8PR 0 B1 2 pieces, ~10% interstitial fat; rep foci delineated 9 Muscle Muscle - Skeletal 0011907 423 482 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.992272 410877 0.98349 0.994173 0.885321 19935 1 76 0.00272075 274 0 1.0197e+08 0.0162964 957705 1.02568e+08 1.53048e+07 19944 5.07864e+07 0 0.0981682 0.994173 0.880163 1.0197e+08 0.00339243 2.20069e+07 1.25696e+07 2.24568e+07 270 2.25217e+07 2.12122e+07 0.00305595 2.21118e+07 49.5408 0.0093373 0.996075 0 50.5059 GTEX-1F5PL-0526-SM-7PBYD 0 B1 2 pieces, no significant adherent fat or atherosis; focal Monckeberg medial sclerosis, rep. delineated 7.3 Blood Vessel Artery - Tibial 0007610 425 480 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987129 149990 0.970718 0.991033 0.859043 21931 1 76 0.00287374 212 0 9.74544e+07 0.0289333 478484 9.83361e+07 1.37577e+07 21952 4.84005e+07 0 0.111675 0.991033 0.85134 9.74544e+07 0.0049366 2.07954e+07 9.99756e+06 2.09841e+07 253 2.10097e+07 2.01586e+07 0.0039011 2.11143e+07 50.1243 0.0048658 0.994938 0 50.2257 GTEX-1F5PL-0726-SM-7MKH8 1 B1 2 pieces, focally approaching score 2 for autolysis; Islets well-preserved, rep delineated. Focal adherent fat, ~2mm 7.3 Pancreas Pancreas 0001150 431 474 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98191 277216 0.983848 0.988455 0.883418 20515 1 76 0.00403752 105 0 8.2236e+07 0.0157747 276165 8.31965e+07 1.27024e+07 20528 4.07289e+07 0 0.10043 0.988455 0.873219 8.2236e+07 0.00524659 1.89727e+07 2.42811e+07 1.91909e+07 123 1.93753e+07 2.66092e+07 0.00463805 1.9333e+07 49.9454 0.00331943 0.995 0 50.2859 GTEX-1F5PL-0826-SM-7MXU7 1 B1 2 pieces, no abnormalities 7.3 Thyroid Thyroid 0002046 433 472 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978851 122676 0.97372 0.987721 0.792332 22954 1 76 0.00293066 134 0 6.94959e+07 0.0259536 259844 7.03599e+07 1.09814e+07 22979 3.43741e+07 0 0.181389 0.987721 0.782602 6.94959e+07 0.00398488 1.52246e+07 7.4584e+06 1.52611e+07 152 1.5509e+07 1.21639e+07 0.00345304 1.55506e+07 50.0669 0.00369307 0.99659 0 50.0599 GTEX-1F5PL-0926-SM-7PC2W 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50-60 microns 8.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 433 472 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988048 533507 0.974696 0.991515 0.82395 24552 1 76 0.00323582 306 0 1.05879e+08 0.0250042 640592 1.06785e+08 1.70205e+07 24583 5.25757e+07 0 0.150746 0.991515 0.816959 1.05879e+08 0.00477221 2.3137e+07 1.39294e+07 2.33052e+07 289 2.35207e+07 2.05873e+07 0.00400133 2.32778e+07 49.7405 0.00599892 0.994983 0 50.181 GTEX-1F5PL-1026-SM-7RHI1 1 B1 2 pieces, fibrous mastopathy; ductal/lobular elements atrophic, rep. delineated 7.9 Breast Breast - Mammary Tissue 0008367 442 463 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990948 151056 0.970855 0.993186 0.783463 24492 1 76 0.0026606 173 0 8.32416e+07 0.0283152 294759 8.38127e+07 8.39154e+06 24527 4.14138e+07 0 0.187392 0.993186 0.778124 8.32416e+07 0.004003 1.82848e+07 8.13499e+06 1.84447e+07 195 1.84946e+07 1.4932e+07 0.00333029 1.84109e+07 49.8866 0.00351688 0.995424 0 50.2176 GTEX-1F5PL-1126-SM-7P8SH 1 B1 6 pieces, confirmed target muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 447 458 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.931048 391229 0.975333 0.963207 0.845718 23126 1 76 0.00378971 164 0 8.62767e+07 0.0243892 828112 8.95724e+07 1.26907e+07 23143 4.15721e+07 0 0.129615 0.963207 0.814601 8.62767e+07 0.00903569 1.79954e+07 9.79135e+06 1.7975e+07 190 1.93142e+07 1.54624e+07 0.00632513 1.92793e+07 49.9548 0.00924517 0.995365 0 49.9716 GTEX-1F5PL-1226-SM-7P8R5 1 B1 6 pieces, confirmed target muscularis 8.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 448 457 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991788 489323 0.978169 0.993826 0.85669 22662 1 76 0.0027279 282 0 1.13923e+08 0.0214846 980245 1.14631e+08 1.60509e+07 22681 5.67182e+07 0 0.121479 0.993826 0.8514 1.13923e+08 0.00380653 2.4405e+07 1.04476e+07 2.47863e+07 297 2.48111e+07 2.21927e+07 0.00326611 2.45893e+07 49.7756 0.00855132 0.995863 0 50.3876 GTEX-1F5PL-1326-SM-7SB83 1 B1 2 pieces, ~5% vascular elements; rep delineated 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 436 469 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991989 351943 0.96519 0.994008 0.762748 23000 1 76 0.00251029 140 0 7.11742e+07 0.0345577 595473 7.16032e+07 7.34172e+06 23024 3.5429e+07 0 0.202442 0.994008 0.758178 7.11742e+07 0.00398833 1.55383e+07 1.13726e+07 1.57737e+07 164 1.57519e+07 1.0543e+07 0.00324781 1.56976e+07 49.9136 0.00831629 0.996027 0 50.3758 GTEX-1F5PL-1426-SM-7MKFH 1 B1 6 pieces, mucosa up to ~1.2mm, ~40-60% thickness. Basal microglandular dilation encircled, destruction of chief cells predominately, unusual pattern 6.5 Stomach Stomach 0000945 459 446 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981739 224630 0.979084 0.988157 0.852139 23089 1 76 0.00413571 266 0 7.9796e+07 0.0201459 1.426e+06 8.07524e+07 1.24214e+07 23107 3.94962e+07 0 0.126945 0.988157 0.842047 7.9796e+07 0.00545342 1.79312e+07 3.67868e+07 1.81201e+07 238 1.82744e+07 1.43148e+07 0.00479029 1.82481e+07 49.964 0.0176589 0.994575 0 50.262 GTEX-1F5PL-1626-SM-7MXTY 1 B1 2 pieces, post menopausal atrophy/involutional changes 7.5 Ovary Ovary 0000992 464 441 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978994 123388 0.974595 0.987873 0.806417 21323 1 76 0.00283956 120 0 5.36045e+07 0.025154 93856 5.42626e+07 8.21958e+06 21342 2.65141e+07 0 0.168178 0.987873 0.796638 5.36045e+07 0.00401227 1.17754e+07 6.52861e+06 1.18584e+07 117 1.20539e+07 1.07982e+07 0.00342065 1.20345e+07 49.9597 0.00172966 0.996752 0 50.1757 GTEX-1F5PL-1726-SM-9QEGL 1 B1 6 pieces, squamous mucosa is ~0.17mm, 10-15% thickness 9.7 Esophagus Esophagus - Mucosa 0006920 450 455 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990537 326766 0.981242 0.993325 0.859579 22648 1 76 0.00170829 279 0 9.64432e+07 0.0184057 335690 9.70913e+07 4.3555e+06 22663 4.79971e+07 0 0.121663 0.993325 0.853842 9.64432e+07 0.00391832 2.17707e+07 1.17822e+07 2.18901e+07 270 2.20287e+07 2.15464e+07 0.0028102 2.18827e+07 49.8338 0.00345747 0.996114 0 50.1367 GTEX-1F5PL-1826-SM-7P8PP 1 B1 6 pieces, squamous epithelium is ~0.22mm, ~5-10% thickness 9.1 Vagina Vagina 0000996 467 438 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987316 431011 0.97933 0.989642 0.825794 23543 1 76 0.00309409 280 0 1.03398e+08 0.0203371 276924 1.0448e+08 1.60066e+07 23570 5.14542e+07 0 0.153536 0.989642 0.817241 1.03398e+08 0.00372061 2.3168e+07 1.50179e+07 2.34857e+07 260 2.36179e+07 2.18265e+07 0.00340661 2.32664e+07 49.6252 0.0026505 0.991969 0 50.3406 GTEX-1F5PL-1926-SM-7MXTP 1 B1 6 pieces, confirmed target muscularis; adherent nubbins of fat, 1-2mm, rep delineated 9.1 Colon Colon - Sigmoid 0001159 471 434 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977187 114397 0.978386 0.98713 0.85114 21518 1 76 0.00276324 168 0 7.29453e+07 0.0212936 535080 7.38963e+07 1.17502e+07 21529 3.60489e+07 0 0.127246 0.98713 0.840185 7.29453e+07 0.00385679 1.57653e+07 7.4544e+06 1.58113e+07 180 1.61011e+07 1.41462e+07 0.00330451 1.61478e+07 50.0724 0.00724096 0.997073 0 50.0727 GTEX-1F5PL-2126-SM-7PC2O 1 B1 6 pieces, target mucosa up to ~ 0.5mm, ~10-15% thickness 6.1 Colon Colon - Transverse 0001157 474 431 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985297 302628 0.973297 0.988507 0.828056 23597 1 76 0.00418893 193 0 8.20657e+07 0.0242016 1.28758e+06 8.30198e+07 1.4213e+07 23619 4.06308e+07 0 0.145241 0.988507 0.818539 8.20657e+07 0.0052753 1.8115e+07 1.11926e+07 1.83753e+07 205 1.84406e+07 1.25164e+07 0.00473035 1.83002e+07 49.8089 0.0155093 0.991717 0 50.3567 GTEX-1F5PL-2226-SM-7MKHE 1 B1 2 pieces, no abnormalities 6.3 Spleen Spleen 0002106 481 424 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.988067 355973 0.969559 0.989617 0.807546 23352 1 76 0.00356901 207 0 8.44361e+07 0.027592 459203 8.5322e+07 6.99081e+06 23377 4.19097e+07 0 0.162014 0.989617 0.799161 8.44361e+07 0.00423885 1.87369e+07 1.46605e+07 1.88614e+07 211 1.89633e+07 1.40732e+07 0.0039034 1.87597e+07 49.7301 0.005382 0.991166 0 50.1655 GTEX-1F5PL-2326-SM-7MKFC 1 B1 2 pieces, cortex, nubbins of adherent fat up to ~1-2mm 9.2 Adrenal Gland Adrenal Gland 0002369 485 420 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986024 404154 0.980628 0.990951 0.85148 23316 1 76 0.00386349 273 0 1.08385e+08 0.0189608 2.09698e+06 1.09375e+08 1.59463e+07 23340 5.37619e+07 0 0.129148 0.990951 0.843775 1.08385e+08 0.00459848 2.41386e+07 1.44958e+07 2.41484e+07 285 2.44187e+07 1.94702e+07 0.00422916 2.43485e+07 49.928 0.0191724 0.995878 0 50.0101 GTEX-1F6I4-0002-SM-EVR38 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 657 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990856 874062 0.972366 0.992893 0.831047 22121 1 76 0.00251772 285 0 1.12471e+08 0.0267672 469552 1.13276e+08 8.37472e+06 22149 5.59552e+07 0 0.141319 0.992893 0.825141 1.12471e+08 0.00377961 2.50012e+07 1.22094e+07 2.52672e+07 280 2.53196e+07 2.70613e+07 0.00314737 2.51647e+07 49.8466 0.0041452 0.994931 0 50.2647 GTEX-1F6I4-0004-SM-7J3AG B1 Blood Whole Blood 0013756 657 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F6I4-0004-SM-7MA6S B1 Blood Whole Blood 0013756 657 BP-55968 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F6I4-0005-SM-ARZKZ B1 8.6 Blood Whole Blood 0013756 657 BP-55969 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2014 LCSET-8136,LCSET-8681 02/23/2016 TruSeq.v1 RNASEQ 0.956203 3.21943e+06 0.932297 0.95822 0.735218 20711 1 76 0.00242808 186 0 1.37387e+08 0.0657038 343272 1.43377e+08 9.65391e+06 20737 6.77688e+07 0 0.197079 0.95822 0.704501 1.37387e+08 0.00368904 2.97266e+07 2.72196e+08 3.19406e+07 215 3.26114e+07 3.65773e+07 0.00305723 2.93416e+07 47.3611 0.00239419 0.960237 0 51.7952 GTEX-1F6I4-0008-SM-EWRMF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 748 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989357 440324 0.98059 0.992696 0.858762 21560 1 76 0.00225054 295 0 1.15772e+08 0.0190911 265643 1.16623e+08 8.052e+06 21582 5.75942e+07 0 0.121828 0.992696 0.85249 1.15772e+08 0.00286795 2.58844e+07 1.37992e+07 2.61296e+07 290 2.62536e+07 3.03234e+07 0.00255098 2.61106e+07 49.8635 0.00227778 0.996035 0 50.2358 GTEX-1F6I4-0011-R10b-SM-9OSWT B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 719 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.993086 555948 0.962992 0.994898 0.852267 24138 1 76 0.003026 271 0 1.05272e+08 0.0365548 3.00128e+06 1.05812e+08 9.39237e+06 24156 5.24225e+07 0 0.110724 0.994898 0.847919 1.05272e+08 0.00397841 2.27898e+07 1.80882e+07 2.29451e+07 317 2.29837e+07 1.34578e+07 0.00350134 2.29156e+07 49.9258 0.0283642 0.99671 0 50.1698 GTEX-1F6I4-0011-R11b-SM-9OSWS B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 719 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989917 477676 0.950172 0.992741 0.782839 24482 1 76 0.0029039 273 0 1.11969e+08 0.0494354 1.32947e+06 1.12787e+08 1.02032e+07 24518 5.56859e+07 0 0.167333 0.992741 0.777156 1.11969e+08 0.00438958 2.40066e+07 1.6514e+07 2.42068e+07 306 2.43131e+07 1.40625e+07 0.00364462 2.41862e+07 49.8692 0.0117874 0.995566 0 50.2076 GTEX-1F6I4-0011-R1a-SM-9OSWU B1, A1 7.7 Brain Brain - Hippocampus 0001954 719 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990691 558979 0.960264 0.993424 0.837963 23654 1 76 0.00369794 271 0 1.06676e+08 0.0395203 5.52234e+06 1.07382e+08 1.08315e+07 23670 5.30857e+07 0 0.122301 0.993424 0.832453 1.06676e+08 0.00465333 2.26963e+07 2.97721e+07 2.32134e+07 320 2.31992e+07 8.37158e+06 0.00417432 2.2954e+07 49.7343 0.0514272 0.996157 0 50.5632 GTEX-1F6I4-0011-R2a-SM-CL536 B1, A1 6.6 Brain Brain - Substantia nigra 0002038 719 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99168 629375 0.965396 0.993491 0.834369 24023 1 76 0.00344005 206 0 8.44006e+07 0.0342986 4.0727e+06 8.49536e+07 1.15445e+07 24043 4.19902e+07 0 0.131027 0.993491 0.828938 8.44006e+07 0.0045919 1.832e+07 1.21368e+07 1.88046e+07 238 1.8793e+07 1.00433e+07 0.00401493 1.84739e+07 49.5719 0.0479403 0.995302 0 50.6527 GTEX-1F6I4-0011-R3a-SM-9QEH9 B1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 719 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990295 367282 0.964135 0.993608 0.848381 23149 1 76 0.00304819 268 0 8.96633e+07 0.0356055 4.89594e+06 9.02401e+07 4.55086e+06 23161 4.46057e+07 0 0.115754 0.993608 0.842959 8.96633e+07 0.00523495 1.92134e+07 1.94555e+07 1.95465e+07 301 1.95151e+07 8.08485e+06 0.00413793 1.94848e+07 49.9612 0.0542546 0.996921 0 50.4297 GTEX-1F6I4-0011-R5b-SM-9QEHA B1, A1 5.7 Brain Brain - Caudate (basal ganglia) 0001873 719 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991165 357594 0.9649 0.994067 0.83618 22668 1 76 0.00329153 268 0 8.88212e+07 0.0349201 5.86036e+06 8.93513e+07 4.29541e+06 22680 4.42093e+07 0 0.128719 0.994067 0.83122 8.88212e+07 0.00528028 1.89247e+07 2.53364e+07 1.91719e+07 285 1.91519e+07 6.72831e+06 0.004283 1.91452e+07 49.9913 0.0655879 0.996969 0 50.3244 GTEX-1F6I4-0011-R6a-SM-CE6R4 B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 719 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989772 649522 0.961807 0.991021 0.820842 24943 1 76 0.00905874 269 0 1.13789e+08 0.0379361 6.62208e+06 1.1482e+08 1.8345e+07 24969 5.6643e+07 0 0.140964 0.991021 0.813472 1.13789e+08 0.00802868 2.42105e+07 3.07247e+07 2.45321e+07 298 2.4646e+07 1.07421e+07 0.00854436 2.42146e+07 49.5585 0.0576737 0.992269 0 50.3299 GTEX-1F6I4-0011-R7a-SM-CJI24 B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 719 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990976 1.23634e+06 0.954818 0.992408 0.81124 21779 1 76 0.00366571 370 0 1.01624e+08 0.0450043 8.28433e+06 1.02402e+08 6.33348e+06 21794 5.05932e+07 0 0.143578 0.992408 0.805081 1.01624e+08 0.00413018 2.07235e+07 6.50828e+07 2.18359e+07 349 2.18172e+07 7.58414e+06 0.00389761 2.08771e+07 48.8991 0.0809003 0.993839 0 51.3069 GTEX-1F6I4-0011-R8a-SM-9QEIA B1, A1 6.3 Brain Brain - Hypothalamus 0001898 719 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989304 317766 0.965853 0.992896 0.846306 22549 1 76 0.00339597 271 0 7.8903e+07 0.0339159 6.34606e+06 7.94675e+07 3.92106e+06 22561 3.92355e+07 0 0.119546 0.992896 0.840295 7.8903e+07 0.00568749 1.68873e+07 1.77615e+07 1.72977e+07 262 1.72202e+07 6.01044e+06 0.00453758 1.71849e+07 49.9486 0.0798573 0.996489 0 50.6004 GTEX-1F6I4-0011-R9a-SM-CMKFU B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 719 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995474 587117 0.960523 0.996344 0.821422 24221 1 76 0.00255576 390 0 1.07673e+08 0.0391216 2.99658e+06 1.08068e+08 7.36953e+06 24248 5.36802e+07 0 0.139101 0.996344 0.818418 1.07673e+08 0.0033434 2.36322e+07 1.37103e+07 2.40198e+07 346 2.38607e+07 1.4691e+07 0.00294923 2.38753e+07 50.0153 0.0277286 0.997213 0 50.4067 GTEX-1F6I4-0126-SM-9MQL2 1 B1 6 pieces; well trimmed with minimal internal fat, epidermis measures about 30 microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 750 1044 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985676 231005 0.973597 0.987794 0.798562 22812 1 76 0.00603239 137 0 5.83381e+07 0.0261502 337300 5.9059e+07 7.07513e+06 22828 2.90143e+07 0 0.175035 0.987794 0.788814 5.83381e+07 0.00757884 1.26403e+07 6.04819e+06 1.28185e+07 125 1.28331e+07 9.63808e+06 0.00680396 1.27435e+07 49.825 0.00571124 0.989912 0 50.3499 GTEX-1F6I4-0226-SM-9MQMA 0 B1 2 pieces; one has large central defect (?fixation) 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 753 1041 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.988295 253076 0.975372 0.990525 0.798787 22839 1 76 0.00438037 145 0 6.93978e+07 0.024309 219922 7.00616e+07 6.19724e+06 22861 3.45271e+07 0 0.176586 0.990525 0.791218 6.93978e+07 0.00538757 1.51861e+07 6.09345e+06 1.53091e+07 152 1.53398e+07 1.17203e+07 0.00488284 1.53031e+07 49.9402 0.00313898 0.992754 0 50.2017 GTEX-1F6I4-0326-SM-7P8T8 0 B1 2 pieces 8 Muscle Muscle - Skeletal 0011907 757 1037 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.946209 324572 0.983063 0.971305 0.877915 20697 1 76 0.00426334 126 0 8.61633e+07 0.016705 896758 8.87088e+07 1.3088e+07 20704 4.18699e+07 0 0.105149 0.971305 0.852723 8.61633e+07 0.00851103 1.82333e+07 9.93775e+06 1.80745e+07 163 1.92626e+07 1.92213e+07 0.00633231 1.91468e+07 49.8492 0.010109 0.996401 0 49.7813 GTEX-1F6I4-0426-SM-7SB7K 1 B1 2 pieces; includes from 5-25% attached fat/skeletal muscle 5.8 Nerve Nerve - Tibial 0001323 760 1034 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989194 190592 0.955807 0.991776 0.681037 23987 1 76 0.00313022 122 0 5.29476e+07 0.0439417 165698 5.33866e+07 6.25014e+06 24022 2.63132e+07 0 0.274771 0.991776 0.675436 5.29476e+07 0.00462259 1.14519e+07 6.54244e+06 1.15856e+07 119 1.15941e+07 7.1156e+06 0.00387446 1.15754e+07 49.9595 0.00310374 0.994357 0 50.2901 GTEX-1F6I4-0526-SM-7PC3B 1 B1 2 pieces; some sclerosis, attachment of vessels 7.8 Blood Vessel Artery - Tibial 0007610 761 1033 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986528 512984 0.977416 0.990761 0.840487 23581 1 76 0.00335536 381 0 1.24342e+08 0.0221427 565149 1.25501e+08 1.91878e+07 23604 6.16859e+07 0 0.136929 0.990761 0.832722 1.24342e+08 0.00523336 2.6404e+07 1.03298e+07 2.67272e+07 341 2.69355e+07 2.55112e+07 0.00429035 2.66819e+07 49.7635 0.00450313 0.994995 0 50.3041 GTEX-1F6I4-0626-SM-9MQLL 1 B1 2 pieces; atherosclerosis, attachment of fat/nerve 6.7 Blood Vessel Artery - Coronary 0001621 828 966 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.9829 270744 0.971672 0.98534 0.7453 23078 1 76 0.00595681 119 0 6.29653e+07 0.0279369 167898 6.39021e+07 7.90233e+06 23104 3.12833e+07 0 0.226373 0.98534 0.734373 6.29653e+07 0.0074982 1.35821e+07 5.46683e+06 1.36741e+07 126 1.37039e+07 1.0026e+07 0.0067256 1.37038e+07 49.9999 0.00262742 0.987779 0 50.1687 GTEX-1F6I4-0726-SM-7PC2P 0 B1 2 pieces 7.1 Heart Heart - Left Ventricle 0006566 831 963 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989045 308665 0.980766 0.992182 0.86669 21650 1 76 0.00445171 267 0 9.31412e+07 0.0190701 3.85387e+06 9.38751e+07 1.44382e+07 21662 4.62691e+07 0 0.114076 0.992182 0.859914 9.31412e+07 0.00613749 2.04083e+07 1.40084e+07 2.0444e+07 268 2.05868e+07 1.19174e+07 0.00529193 2.05254e+07 49.9253 0.0410531 0.995319 0 50.0437 GTEX-1F6I4-0826-SM-7RHGK 1 B1 2 pieces; from 10-20% fibrous/fat 7.3 Heart Heart - Atrial Appendage 0006631 835 959 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992305 209167 0.980339 0.994261 0.798601 24077 1 76 0.00328355 272 0 1.07908e+08 0.0193691 2.84172e+06 1.08531e+08 1.02975e+07 24116 5.37198e+07 0 0.181738 0.994261 0.794018 1.07908e+08 0.00461918 2.3675e+07 1.32762e+07 2.39959e+07 321 2.40441e+07 1.51076e+07 0.00395005 2.38165e+07 49.7622 0.0261835 0.996218 0 50.3366 GTEX-1F6I4-1026-SM-7P8PS 0 B1 2 pieces; atelectasis, focal smooth muscle hypertrophy and increased mucosal goblet cells 6.3 Lung Lung 0008952 844 950 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.98991 253126 0.972819 0.991936 0.729616 24397 1 76 0.00382579 205 0 9.6526e+07 0.0268195 643785 9.73107e+07 1.44846e+07 24444 4.80138e+07 0 0.243203 0.991936 0.723732 9.6526e+07 0.0045316 2.11172e+07 9.72761e+06 2.15157e+07 234 2.15712e+07 1.31073e+07 0.00417798 2.12418e+07 49.6152 0.00661577 0.993961 0 50.4674 GTEX-1F6I4-1326-SM-7P8QQ 2 B1 2 pieces; fibromuscular stroma and glands with sloughed epithelium and corpora amylacea 6.1 Prostate Prostate 0002367 872 922 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.985734 347435 0.963414 0.988164 0.780328 25756 1 76 0.00354923 208 0 8.60114e+07 0.0363267 670289 8.70417e+07 1.3553e+07 25791 4.27703e+07 0 0.183086 0.988164 0.771092 8.60114e+07 0.00441056 1.83761e+07 9.79423e+06 1.88199e+07 210 1.8845e+07 1.25996e+07 0.00397883 1.85503e+07 49.606 0.00770078 0.990593 0 50.5966 GTEX-1F6I4-1426-SM-7MXU3 1 B1 2 pieces; spermatogenesis is present/reduced 5.7 Testis Testis 0000473 875 919 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.974375 148825 0.929675 0.984685 0.710587 33082 1 76 0.0034384 143 0 7.59677e+07 0.0700329 719816 7.71492e+07 1.21593e+07 33139 3.75154e+07 0 0.219088 0.984685 0.699705 7.59677e+07 0.00453237 1.56219e+07 1.12117e+07 1.56657e+07 144 1.59893e+07 1.10273e+07 0.00397966 1.59882e+07 49.9982 0.00933018 0.994995 0 50.0701 GTEX-1F6I4-2126-SM-7PC2J 1 B1 2 pieces; mature adipose tissue, detached portion of fibrous tissue 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 906 888 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.983973 362356 0.976968 0.988711 0.789403 24851 1 76 0.00394877 272 0 1.02923e+08 0.0227384 840410 1.04098e+08 1.73997e+07 24884 5.10097e+07 0 0.187565 0.988711 0.780492 1.02923e+08 0.00586519 2.25284e+07 1.2707e+07 2.27132e+07 263 2.29076e+07 1.48924e+07 0.00490239 2.27939e+07 49.8756 0.00807327 0.993448 0 50.2042 GTEX-1F6I4-2326-SM-7RHGL 1 B1 6 pieces; few pieces include ~10% attached fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 910 884 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990879 174850 0.974319 0.993245 0.811779 22693 1 76 0.00286575 134 0 5.88604e+07 0.0254545 468644 5.92607e+07 5.21101e+06 22710 2.92929e+07 0 0.16254 0.993245 0.806296 5.88604e+07 0.00485252 1.29028e+07 7.79008e+06 1.29746e+07 134 1.29863e+07 9.75256e+06 0.00385677 1.30245e+07 50.0736 0.00790817 0.995612 0 50.1386 GTEX-1F6I4-2526-SM-7SB8F 1 B1 2 pieces; mature adipose tissue with 30 and 50% dense fibrocollagenous stroma with scattered ducts 6.9 Breast Breast - Mammary Tissue 0008367 915 879 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989399 353757 0.961242 0.992016 0.621955 27192 1 76 0.00313971 145 0 9.33973e+07 0.038431 228420 9.41489e+07 1.06047e+07 27268 4.64408e+07 0 0.339287 0.992016 0.616989 9.33973e+07 0.00432007 2.04423e+07 1.27575e+07 2.06405e+07 157 2.07362e+07 1.29461e+07 0.00372833 2.05824e+07 49.8139 0.00242616 0.994634 0 50.2413 GTEX-1F6I4-3026-SM-7P8SI 1 B1 2 pieces; Purkinje cells are well visualized, 1 piece includes portion of meninges 6 Brain Brain - Cerebellum 0002037 1025 769 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.916745 720233 0.903139 0.954518 0.694317 22600 1 76 0.00492034 101 0 4.60772e+07 0.0964983 555123 4.82728e+07 7.90871e+06 22615 2.20376e+07 0 0.208822 0.954518 0.662738 4.60772e+07 0.0100723 8.98703e+06 3.34879e+07 9.22418e+06 108 1.01097e+07 5.39839e+06 0.00739436 9.73404e+06 49.0534 0.0114997 0.992291 0 50.6511 GTEX-1F6I4-3126-SM-7P8SD 1 B1 2 pieces, not the requested 4 6.1 Brain Brain - Cortex 0001870 1024 770 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.940146 497753 0.958285 0.967509 0.827333 23668 1 76 0.0053618 197 0 8.32336e+07 0.0414052 4.44926e+06 8.60288e+07 1.3351e+07 23677 4.03235e+07 0 0.130952 0.967509 0.800452 8.32336e+07 0.00968784 1.7534e+07 2.99549e+07 1.71302e+07 212 1.83007e+07 8.21611e+06 0.00746364 1.83909e+07 50.1228 0.0517183 0.994873 0 49.4176 GTEX-1F6I4-3226-SM-7MKGI 1 B1 1 piece; adenohypophysis and neurohypophysis 6.7 Pituitary Pituitary 0000007 1025 769 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980055 420070 0.962753 0.987456 0.782965 25577 1 76 0.00418649 137 0 7.58915e+07 0.036999 294750 7.68556e+07 1.12611e+07 25604 3.75146e+07 0 0.179788 0.987456 0.773144 7.58915e+07 0.00603819 1.57654e+07 1.01817e+07 1.59918e+07 158 1.6255e+07 1.18551e+07 0.0051054 1.60162e+07 49.6299 0.00383511 0.994856 0 50.3565 GTEX-1F6IF-0004-SM-7J3AJ B1 Blood Whole Blood 0013756 818 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F6IF-0004-SM-7MA6V B1 Blood Whole Blood 0013756 818 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F6IF-0005-SM-ARU6K B1 6.6 Blood Whole Blood 0013756 818 BP-56007 RNA isolation_PAXgene Blood RNA (Manual) 08/18/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.975968 229568 0.986255 0.97725 0.807374 17873 1 76 0.00213805 100 0 6.94798e+07 0.0129704 302808 7.10972e+07 2.1635e+06 17879 3.45837e+07 0 0.178881 0.97725 0.789007 6.94798e+07 0.003207 1.6339e+07 9.91166e+07 1.6457e+07 111 1.64677e+07 1.8728e+07 0.00267183 1.64195e+07 49.9268 0.00425907 0.978533 0 50.1799 GTEX-1F6IF-0008-SM-EWRMJ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 963 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.99095 384915 0.983287 0.99361 0.865996 20827 1 76 0.0019561 296 0 1.0572e+08 0.0163815 209069 1.06399e+08 6.9065e+06 20846 5.26365e+07 0 0.117291 0.99361 0.860462 1.0572e+08 0.00267929 2.37939e+07 9.88595e+06 2.39618e+07 286 2.40586e+07 2.74615e+07 0.00230827 2.39469e+07 49.8836 0.00196494 0.99627 0 50.1758 GTEX-1F6IF-0011-R10a-SM-9QEIN B1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 833 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990558 508238 0.963532 0.993502 0.852935 23452 1 76 0.00171516 270 0 9.41602e+07 0.0359955 3.05341e+06 9.4776e+07 4.69524e+06 23468 4.68438e+07 0 0.110596 0.993502 0.847393 9.41602e+07 0.00381965 2.06009e+07 1.5119e+07 2.07512e+07 314 2.08215e+07 1.22874e+07 0.00276428 2.07669e+07 49.9344 0.0322171 0.996446 0 50.1818 GTEX-1F6IF-0011-R1b-SM-9WG78 B1, A1 6.3 Brain Brain - Hippocampus 0001954 833 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.993219 450719 0.96276 0.995159 0.819735 25209 1 76 0.00237403 375 0 1.14679e+08 0.0369466 8.8363e+06 1.15237e+08 8.24382e+06 25240 5.71206e+07 0 0.143025 0.995159 0.815767 1.14679e+08 0.00332645 2.51927e+07 2.41057e+07 2.55466e+07 345 2.54324e+07 1.2319e+07 0.00284931 2.55065e+07 50.0727 0.0766793 0.997099 0 50.3488 GTEX-1F6IF-0011-R2b-SM-9QEHB B1, A1 5.7 Brain Brain - Substantia nigra 0002038 833 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990796 277819 0.964194 0.993936 0.839014 23334 1 76 0.00181133 274 0 8.01382e+07 0.0355931 5.72716e+06 8.06272e+07 3.6604e+06 23352 3.9872e+07 0 0.125181 0.993936 0.833926 8.01382e+07 0.00409562 1.75779e+07 1.12724e+07 1.79164e+07 312 1.77941e+07 8.28757e+06 0.00294987 1.79103e+07 50.1628 0.0710326 0.997076 0 50.4769 GTEX-1F6IF-0011-R4b-SM-CKZNJ B1, A1 5.8 Brain Brain - Amygdala 0001876 833 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990413 863867 0.953953 0.992817 0.836681 22846 1 76 0.00191524 268 0 8.32599e+07 0.0458162 7.42191e+06 8.38623e+07 7.88926e+06 22861 4.1449e+07 0 0.117272 0.992817 0.830671 8.32599e+07 0.00340662 1.78693e+07 2.94689e+07 1.8462e+07 329 1.83476e+07 7.69276e+06 0.00265913 1.81464e+07 49.7244 0.0885011 0.99522 0 50.8157 GTEX-1F6IF-0011-R5b-SM-CM2RH B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 833 BP-69107 RNA isolation_PAXgene Tissue miRNA 11/18/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992528 1.269e+06 0.949346 0.994087 0.809435 25958 1 76 0.00185321 373 0 1.24807e+08 0.0502483 5.13458e+06 1.25549e+08 6.82716e+06 25981 6.21509e+07 0 0.139911 0.994087 0.80465 1.24807e+08 0.00264719 2.69545e+07 3.62657e+07 2.71907e+07 362 2.72787e+07 1.47542e+07 0.00224958 2.70616e+07 49.8003 0.0408971 0.995647 0 50.2181 GTEX-1F6IF-0011-R6a-SM-9QEIO B1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 833 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990467 531784 0.955389 0.993563 0.823808 23994 1 76 0.00174789 268 0 8.40206e+07 0.04422 3.47672e+06 8.4565e+07 4.15168e+06 24012 4.17926e+07 0 0.131581 0.993563 0.818505 8.40206e+07 0.00391182 1.81779e+07 1.75897e+07 1.84346e+07 292 1.84688e+07 1.00938e+07 0.00282648 1.83673e+07 49.8622 0.041113 0.99666 0 50.3505 GTEX-1F6IF-0011-R8a-SM-9OSX5 B1, A1 6.5 Brain Brain - Hypothalamus 0001898 833 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989255 431000 0.961802 0.992769 0.843657 24227 1 76 0.00235203 270 0 9.6395e+07 0.0378901 4.70271e+06 9.70971e+07 9.47394e+06 24249 4.7929e+07 0 0.118146 0.992769 0.837556 9.6395e+07 0.00376422 2.10997e+07 2.14335e+07 2.14043e+07 320 2.14283e+07 1.00964e+07 0.00305563 2.13686e+07 49.9302 0.048433 0.996283 0 50.3583 GTEX-1F6IF-0126-SM-9MQLB 0 B1 2 pieces, no adherant fat. 6.9 Nerve Nerve - Tibial 0001323 945 518 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985032 221080 0.966678 0.987141 0.727104 24657 1 76 0.00573473 166 0 8.32772e+07 0.0329938 236481 8.43621e+07 1.00151e+07 24696 4.14369e+07 0 0.239574 0.987141 0.717754 8.32772e+07 0.00708535 1.83305e+07 8.18682e+06 1.8452e+07 164 1.84952e+07 1.24054e+07 0.0064086 1.84551e+07 49.9457 0.00280317 0.989249 0 50.1651 GTEX-1F6IF-0226-SM-7PBZ6 0 B1 2 pieces, trace interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 946 517 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989759 208966 0.978796 0.993308 0.84801 21895 1 76 0.00249914 271 0 1.04927e+08 0.0209648 820926 1.05634e+08 1.4003e+07 21912 5.21816e+07 0 0.130786 0.993308 0.842335 1.04927e+08 0.00443401 2.21912e+07 1.00308e+07 2.23912e+07 288 2.24764e+07 2.21404e+07 0.00346312 2.24329e+07 49.9516 0.00777142 0.996857 0 50.2243 GTEX-1F6IF-0426-SM-7PBZV 0 B1 2 pieces, minimal adherant fat; ~50% occlusive atheriosis, delineated, focally calcified 5.8 Blood Vessel Artery - Tibial 0007610 959 504 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98731 183899 0.975487 0.990814 0.740823 24410 1 76 0.00323479 275 0 1.1408e+08 0.0241597 571374 1.15137e+08 1.61496e+07 24454 5.66507e+07 0 0.234664 0.990814 0.734018 1.1408e+08 0.00492435 2.48795e+07 1.01997e+07 2.51014e+07 316 2.51956e+07 1.73207e+07 0.00407658 2.51654e+07 49.9701 0.00496254 0.994318 0 50.222 GTEX-1F6IF-0526-SM-7MKHD 1 B1 2 pieces, approaching score '2'. Spermatogenesis is present but appears reduced 6.2 Testis Testis 0000473 961 502 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983055 360823 0.926272 0.988388 0.717965 33159 1 76 0.00383195 146 0 7.50415e+07 0.0733959 556191 7.59232e+07 1.10479e+07 33211 3.71958e+07 0 0.208306 0.988388 0.709628 7.50415e+07 0.00520014 1.53966e+07 1.02828e+07 1.55867e+07 140 1.57853e+07 1.19468e+07 0.00451236 1.55537e+07 49.6305 0.00732571 0.993721 0 50.3068 GTEX-1F6IF-0726-SM-7P8TW 0 B1 6 pieces, no dermal fat; squamous epithelium is ~45-60 microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 963 500 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.928605 387613 0.969509 0.961362 0.766299 25777 1 76 0.00432073 162 0 8.29721e+07 0.0301833 548390 8.63068e+07 1.33501e+07 25814 3.99363e+07 0 0.20321 0.961362 0.73669 8.29721e+07 0.00930399 1.75651e+07 1.20345e+07 1.76182e+07 159 1.90608e+07 1.35166e+07 0.00672746 1.88461e+07 49.7167 0.00635396 0.994118 0 50.0755 GTEX-1F6IF-0926-SM-7SB7M 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40-50 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 965 498 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988277 288426 0.96748 0.991472 0.737862 25933 1 76 0.00279041 166 0 8.22004e+07 0.0322484 285347 8.29075e+07 9.76624e+06 25975 4.08449e+07 0 0.229619 0.991472 0.731569 8.22004e+07 0.00428188 1.80148e+07 1.04094e+07 1.82047e+07 170 1.82673e+07 1.40237e+07 0.00353374 1.82104e+07 49.9219 0.00344175 0.994667 0 50.2622 GTEX-1F6IF-1126-SM-9KNV2 1 B1 2 pieces, no abnomormalities 6.4 Thyroid Thyroid 0002046 1013 450 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991394 218141 0.968808 0.99244 0.739312 25442 1 76 0.00263558 274 0 1.05746e+08 0.0308776 699389 1.06552e+08 1.11751e+07 25491 5.26973e+07 0 0.229496 0.99244 0.733723 1.05746e+08 0.00342267 2.32114e+07 1.19764e+07 2.34572e+07 297 2.34532e+07 1.46687e+07 0.00302871 2.33243e+07 49.8622 0.00656385 0.993486 0 50.2634 GTEX-1F6IF-2026-SM-7P8SE 1 B1 2 pieces, ~10% vascular/fascia elements, rep. delineated 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1040 423 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.923278 275362 0.976205 0.958615 0.801242 23634 1 76 0.00457073 131 0 6.60261e+07 0.0234363 439538 6.88765e+07 1.16605e+07 23649 3.16813e+07 0 0.174963 0.958615 0.768082 6.60261e+07 0.00924208 1.40801e+07 9.24865e+06 1.41067e+07 140 1.53424e+07 1.05851e+07 0.0068203 1.51597e+07 49.7005 0.00638154 0.993952 0 50.0472 GTEX-1F6IF-2526-SM-7P8TV 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic changes 6.5 Heart Heart - Left Ventricle 0006566 1058 405 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.929823 279615 0.981061 0.962229 0.82829 21899 1 76 0.00411021 265 0 8.58111e+07 0.0188097 5.2893e+06 8.91795e+07 1.43471e+07 21910 4.13439e+07 0 0.152771 0.962229 0.797004 8.58111e+07 0.0091492 1.89484e+07 2.62059e+07 1.78564e+07 285 1.93878e+07 7.5695e+06 0.00654485 1.98287e+07 50.5622 0.0593107 0.994635 0 48.5164 GTEX-1F6IF-2926-SM-7MKGB 1 B1 1 piece, mainly adenohypophysis; ~3x2.5mm focus of neurohypophysis, delineated 7.1 Pituitary Pituitary 0000007 1065 398 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979189 420516 0.959492 0.98696 0.759815 24788 1 76 0.00388967 132 0 7.11206e+07 0.0402417 560161 7.20602e+07 1.10038e+07 24822 3.51575e+07 0 0.199677 0.98696 0.749907 7.11206e+07 0.00579662 1.50559e+07 1.24971e+07 1.53306e+07 150 1.56051e+07 1.02903e+07 0.00483564 1.53e+07 49.5064 0.00777351 0.994731 0 50.452 GTEX-1F6IF-3026-SM-7P8QN 1 B1 2 pieces, no abnormalities 7.3 Brain Brain - Cerebellum 0002037 1069 394 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987607 516154 0.95319 0.990027 0.75914 25692 1 76 0.00286071 271 0 1.315e+08 0.0464357 3.21753e+06 1.32824e+08 1.65502e+07 25738 6.54264e+07 0 0.19405 0.990027 0.751569 1.315e+08 0.00436945 2.85494e+07 2.66289e+07 2.87691e+07 312 2.89056e+07 1.50642e+07 0.00361324 2.86982e+07 49.8199 0.024224 0.992447 0 50.1917 GTEX-1F6RS-0004-SM-7J3AR C1 Blood Whole Blood 0013756 1096 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6780,LCSET-7006 03/30/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F6RS-0004-SM-7MA74 C1 Blood Whole Blood 0013756 1096 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F6RS-0008-SM-EWRMG C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1176 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.991899 486298 0.983934 0.994257 0.872598 21449 1 76 0.00199766 296 0 1.28265e+08 0.015768 242743 1.29006e+08 8.2289e+06 21473 6.38845e+07 0 0.111336 0.994257 0.867587 1.28265e+08 0.0024846 2.88168e+07 1.11487e+07 2.90591e+07 321 2.91528e+07 3.35764e+07 0.00223486 2.89858e+07 49.8564 0.00188164 0.996615 0 50.2094 GTEX-1F6RS-0126-SM-9MQKZ 1 C1 6 pieces; well trimmed; 10% dermal fat 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1175 660 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984059 325916 0.97752 0.986579 0.807044 21886 1 76 0.00567881 161 0 6.1368e+07 0.0222545 731144 6.22028e+07 7.72171e+06 21898 3.05187e+07 0 0.170476 0.986579 0.796213 6.1368e+07 0.00748776 1.34914e+07 7.11369e+06 1.36223e+07 138 1.36473e+07 1.01569e+07 0.00658097 1.36192e+07 49.9484 0.0117542 0.989099 0 50.2414 GTEX-1F6RS-0226-SM-9MQKO 1 C1 2 pieces; <5% fibrous content 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1177 659 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.986995 421569 0.974603 0.989375 0.785596 23481 1 76 0.00403495 197 0 9.00731e+07 0.0251099 712404 9.10404e+07 7.81013e+06 23516 4.47977e+07 0 0.189008 0.989375 0.777249 9.00731e+07 0.0052092 1.97684e+07 9.25284e+06 1.99458e+07 207 1.99753e+07 1.49299e+07 0.00462067 1.99445e+07 49.9614 0.00782515 0.991756 0 50.2233 GTEX-1F6RS-0826-SM-7P8T9 2 C1 2 pieces; moderate emphysema; focal hemorrhage; congested vessels 6 Lung Lung 0008952 1212 626 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.923005 282666 0.964731 0.957826 0.746287 25300 1 76 0.00471912 123 0 7.2975e+07 0.0349541 337942 7.61881e+07 1.24537e+07 25336 3.50176e+07 0 0.218444 0.957826 0.714813 7.2975e+07 0.00935901 1.52911e+07 1.04293e+07 1.55341e+07 138 1.68413e+07 1.12745e+07 0.00695473 1.65533e+07 49.5688 0.00443563 0.992647 0 50.3943 GTEX-1F6RS-2026-SM-7RHHC 1 C1 6 pieces; well trimmed; 10% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1231 612 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992 289447 0.975984 0.993844 0.753753 23142 1 76 0.00241896 222 0 9.59883e+07 0.0237863 1.109e+06 9.65828e+07 8.85767e+06 23187 4.77875e+07 0 0.22223 0.993844 0.749114 9.59883e+07 0.0039577 2.12321e+07 1.3109e+07 2.12971e+07 246 2.13408e+07 1.5495e+07 0.0031869 2.13663e+07 50.03 0.0114823 0.995689 0 50.0764 GTEX-1F6RS-2726-SM-7MKHA 1 C1 2 pieces; corpora albicantia comprise 20% 6.1 Ovary Ovary 0000992 1244 602 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984013 253717 0.965673 0.989022 0.78977 22314 1 76 0.00411447 156 0 7.46795e+07 0.0341538 966825 7.55084e+07 1.18434e+07 22333 3.70269e+07 0 0.175903 0.989022 0.7811 7.46795e+07 0.0049551 1.6111e+07 1.43511e+07 1.64637e+07 156 1.65685e+07 1.44479e+07 0.00453266 1.63725e+07 49.7025 0.0128042 0.99403 0 50.5415 GTEX-1F6RS-2926-SM-7MKG5 1 C1 2 pieces; no glandular component 6.1 Uterus Uterus 0000995 1246 601 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6756 03/23/2015 TruSeq.v1 EXCLUDE 0.977801 383122 0.971254 0.985921 0.807933 25154 1 76 0.00423268 280 0 1.14396e+08 0.0285115 1.31022e+06 1.16029e+08 1.87004e+07 25194 5.65114e+07 0 0.163321 0.985921 0.796558 1.14396e+08 0.00553062 2.49846e+07 1.95761e+07 2.54872e+07 327 2.58698e+07 2.07054e+07 0.00487631 2.5502e+07 49.642 0.0112922 0.994042 0 50.4979 GTEX-1F6RS-3026-SM-7MXTQ 1 C1 4 pieces; adherent hemorrhagic meninges on 1 piece [outlined 6.4 Brain Brain - Cerebellum 0002037 1253 595 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 EXCLUDE 0.974786 792407 0.905289 0.984156 0.693592 23289 1 76 0.00330042 153 0 7.46019e+07 0.0943631 1.67093e+06 7.58029e+07 1.20466e+07 23317 3.68595e+07 0 0.211697 0.984156 0.682603 7.46019e+07 0.00438938 1.5244e+07 5.00681e+07 1.55034e+07 170 1.57572e+07 6.9824e+06 0.00383972 1.56126e+07 49.7694 0.0220431 0.993526 0 50.4218 GTEX-1F6RS-3126-SM-9MQK7 1 C1 4 pieces; 2 pieces are small & fragmented 6.6 Brain Brain - Cortex 0001870 1255 593 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985175 452618 0.960322 0.98776 0.836353 22741 1 76 0.00582435 150 0 7.00198e+07 0.0393923 4.49089e+06 7.08875e+07 8.50886e+06 22755 3.48254e+07 0 0.123969 0.98776 0.826116 7.00198e+07 0.00731743 1.50703e+07 1.56232e+07 1.57611e+07 183 1.56517e+07 7.36092e+06 0.00656893 1.53256e+07 49.4737 0.0633523 0.990344 0 51.1204 GTEX-1F75A-0001-SM-7J3AT C1 Blood Whole Blood 0013756 1246 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6780,LCSET-7102 04/19/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F75A-0001-SM-7MA76 C1 Blood Whole Blood 0013756 1246 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F75A-0008-SM-EAZCQ C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1258 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993067 475270 0.981904 0.994065 0.868295 20951 1 76 0.00171275 291 0 1.19045e+08 0.0177681 253166 1.19755e+08 8.93374e+06 20974 5.93463e+07 0 0.113609 0.994065 0.863141 1.19045e+08 0.00275815 2.68564e+07 1.29981e+07 2.70166e+07 302 2.70422e+07 3.23437e+07 0.00223492 2.69446e+07 49.9096 0.00211403 0.995063 0 50.1487 GTEX-1F75A-0011-R11a-SM-AHZ35 C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 1250 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987536 868012 0.948795 0.98938 0.786727 25191 1 76 0.00673158 273 0 1.33218e+08 0.0507188 2.25895e+06 1.34648e+08 2.27362e+07 25231 6.62424e+07 0 0.162068 0.98938 0.778372 1.33218e+08 0.00862664 2.86532e+07 2.56223e+07 2.88694e+07 328 2.89045e+07 1.81447e+07 0.00767735 2.88384e+07 49.9427 0.0167766 0.991223 0 50.188 GTEX-1F75A-0011-R1b-SM-CE6RA C1, A1 6.1 Brain Brain - Hippocampus 0001954 1250 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989818 900171 0.951454 0.99115 0.841238 23637 1 76 0.00802098 160 0 7.81751e+07 0.0482394 5.55301e+06 7.88731e+07 1.1179e+07 23653 3.89016e+07 0 0.110216 0.99115 0.833793 7.81751e+07 0.00724967 1.68634e+07 2.44955e+07 1.71943e+07 195 1.71807e+07 8.67940e+06 0.00763584 1.6983e+07 49.7107 0.0704044 0.992482 0 50.4857 GTEX-1F75A-0011-R3b-SM-ARL8K C1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1250 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991238 1.2558e+06 0.953555 0.991541 0.844035 22382 1 76 0.00213122 205 0 7.35937e+07 0.0460244 3.68304e+06 7.42215e+07 4.51009e+06 22399 3.65712e+07 0 0.109519 0.991541 0.836896 7.35937e+07 0.00260357 1.58746e+07 2.36438e+07 1.59794e+07 233 1.62538e+07 9.24311e+06 0.00236732 1.56286e+07 49.0195 0.0496222 0.991843 0 50.1645 GTEX-1F75A-0011-R4a-SM-ARL8J C1, A1 6.1 Brain Brain - Amygdala 0001876 1250 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.991151 705635 0.962927 0.991586 0.868882 21227 1 76 0.00208112 159 0 6.18635e+07 0.036705 3.29626e+06 6.23884e+07 5.24037e+06 21241 3.07341e+07 0 0.094045 0.991586 0.861571 6.18635e+07 0.00263452 1.3479e+07 1.50388e+07 1.35603e+07 179 1.37625e+07 8.35355e+06 0.0023577 1.33022e+07 49.1495 0.0528345 0.992021 0 50.1504 GTEX-1F75A-0011-R5a-SM-ARZMJ C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 1250 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986995 1.28219e+06 0.958135 0.989408 0.833677 22155 1 76 0.0027577 160 0 6.89136e+07 0.0415395 4.15727e+06 6.96513e+07 2.64725e+06 22165 3.4147e+07 0 0.124458 0.989408 0.824847 6.89136e+07 0.00389408 1.46923e+07 2.56502e+07 1.49584e+07 190 1.51065e+07 8.12004e+06 0.0033245 1.46741e+07 49.2741 0.0596869 0.991822 0 50.4487 GTEX-1F75A-0011-R6b-SM-9QEHD C1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1250 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990275 558733 0.95419 0.99339 0.83999 23860 1 76 0.00204309 271 0 9.33022e+07 0.0454648 4.22303e+06 9.3923e+07 4.62592e+06 23879 4.64116e+07 0 0.114199 0.99339 0.834438 9.33022e+07 0.00412064 2.01203e+07 2.05941e+07 2.03926e+07 312 2.04535e+07 1.17187e+07 0.00307861 2.03153e+07 49.8305 0.0449627 0.996504 0 50.336 GTEX-1F75A-0011-R7b-SM-9QEHE C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 1250 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990624 884154 0.9564 0.993647 0.834735 24865 1 76 0.00216678 375 0 1.31706e+08 0.0433247 6.46502e+06 1.32548e+08 6.73788e+06 24890 6.5525e+07 0 0.121665 0.993647 0.829432 1.31706e+08 0.00416539 2.84195e+07 3.31326e+07 2.87304e+07 342 2.88516e+07 1.45424e+07 0.00316304 2.8642e+07 49.8177 0.048775 0.996671 0 50.272 GTEX-1F75A-0011-R8a-SM-CL539 C1, A1 6.1 Brain Brain - Hypothalamus 0001898 1250 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991826 612461 0.964717 0.99377 0.844965 23961 1 76 0.002885 373 0 1.01531e+08 0.0350579 8.84821e+06 1.02167e+08 1.21268e+07 23983 5.05305e+07 0 0.119752 0.99377 0.839701 1.01531e+08 0.00451655 2.21859e+07 2.00145e+07 2.29223e+07 395 2.27587e+07 9.39447e+06 0.00369918 2.25073e+07 49.7223 0.0866052 0.995714 0 50.8163 GTEX-1F75A-0126-SM-7RHGM 0 C1 6 pieces, trace dermal fat (rep delineated); squamous epithelium is ~40-50 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 1257 1265 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991756 129337 0.974402 0.993857 0.817655 24141 1 76 0.0025913 179 0 7.64836e+07 0.0253735 580556 7.69564e+07 7.65714e+06 24166 3.80747e+07 0 0.156748 0.993857 0.812632 7.64836e+07 0.00387129 1.67488e+07 7.92256e+06 1.6897e+07 185 1.68998e+07 1.29611e+07 0.00322994 1.68982e+07 49.9975 0.00754396 0.995958 0 50.2203 GTEX-1F75A-0226-SM-7PC2K 0 C1 2 pieces, ~5-10% fascia, rep delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 1259 1264 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988205 537637 0.973114 0.991149 0.786181 25053 1 76 0.00359346 225 0 1.00652e+08 0.0264996 342190 1.01551e+08 1.68122e+07 25093 4.99688e+07 0 0.186933 0.991149 0.779223 1.00652e+08 0.0046673 2.20227e+07 1.04568e+07 2.22429e+07 232 2.24169e+07 1.79125e+07 0.00412879 2.21361e+07 49.6849 0.00336963 0.994093 0 50.2488 GTEX-1F75A-0326-SM-7MXTR 1 C1 2 pieces, regressive changes, nodeular goiter 6.1 Thyroid Thyroid 0002046 1260 1263 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.973323 94620 0.966362 0.984508 0.813327 23592 1 76 0.00297031 128 0 5.72711e+07 0.0333291 182183 5.81723e+07 9.13109e+06 23613 2.82488e+07 0 0.153035 0.984508 0.800726 5.72711e+07 0.00460604 1.23408e+07 7.07358e+06 1.24019e+07 129 1.26668e+07 1.0302e+07 0.00377888 1.26817e+07 50.0293 0.00313178 0.995692 0 50.1234 GTEX-1F75A-0426-SM-7RHGN 0 C1 2 pieces, no significant adherant fat 6.9 Nerve Nerve - Tibial 0001323 1262 1261 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990426 239437 0.968459 0.992942 0.769131 25007 1 76 0.00254643 298 0 9.90043e+07 0.0312281 322781 9.9708e+07 9.73871e+06 25056 4.92494e+07 0 0.199328 0.992942 0.763703 9.90043e+07 0.00415749 2.17222e+07 8.52613e+06 2.18514e+07 262 2.189e+07 1.5778e+07 0.00334992 2.19222e+07 50.0368 0.00323726 0.995459 0 50.1483 GTEX-1F75A-0526-SM-9WYSS 0 C1 2 pieces, no adherent fat or atherosis 6.9 Blood Vessel Artery - Tibial 0007610 1263 1261 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993481 256410 0.971004 0.99441 0.793019 22895 1 76 0.0025556 282 0 1.00471e+08 0.0286099 384282 1.01036e+08 6.1788e+06 22929 5.00639e+07 0 0.177985 0.99441 0.788586 1.00471e+08 0.0040745 2.15595e+07 9.28368e+06 2.17522e+07 274 2.17438e+07 1.77573e+07 0.00331434 2.16563e+07 49.8993 0.00380343 0.995338 0 50.2225 GTEX-1F75A-0626-SM-7PBYI 0 C1 2 pieces, trace interstitital fat 8.5 Muscle Muscle - Skeletal 0011907 1265 1259 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.990501 220703 0.981945 0.993741 0.879197 21350 1 76 0.0028134 272 0 1.14546e+08 0.0178098 1.26451e+06 1.15267e+08 1.59014e+07 21362 5.69885e+07 0 0.102748 0.993741 0.873694 1.14546e+08 0.00433949 2.46087e+07 1.37108e+07 2.4928e+07 297 2.49735e+07 2.48854e+07 0.00357396 2.48904e+07 49.9167 0.0109703 0.996981 0 50.3223 GTEX-1F75A-0726-SM-7RHHD 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~40 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1267 1258 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991044 147895 0.975167 0.993538 0.827656 23857 1 76 0.00256752 237 0 8.77143e+07 0.0245742 353302 8.82849e+07 8.57602e+06 23882 4.36589e+07 0 0.147511 0.993538 0.822308 8.77143e+07 0.00373915 1.9091e+07 9.91115e+06 1.9305e+07 237 1.93441e+07 1.64923e+07 0.00315186 1.92565e+07 49.8866 0.00400184 0.996032 0 50.2786 GTEX-1F75A-1026-SM-7PC3W 1 C1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 1275 1252 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.983824 473475 0.975203 0.988495 0.808553 23432 1 76 0.00365682 261 0 9.92045e+07 0.0245561 3.25463e+06 1.00359e+08 1.68962e+07 23460 4.91493e+07 0 0.16665 0.988495 0.79925 9.92045e+07 0.00570976 2.13057e+07 1.19928e+07 2.13532e+07 256 2.16342e+07 1.40374e+07 0.00467844 2.14428e+07 49.7779 0.0324298 0.993166 0 50.0557 GTEX-1F75A-1626-SM-9JGGT 2 C1 2 pieces, marked passive congestion, focal areas with early infarction 6.3 Liver Liver 0001114 1284 1247 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.991898 146596 0.980516 0.993541 0.864446 21067 1 76 0.003861 262 0 8.50364e+07 0.0193959 3.37084e+06 8.55893e+07 7.45204e+06 21080 4.23708e+07 0 0.116071 0.993541 0.858862 8.50364e+07 0.00444042 1.83615e+07 1.63577e+07 1.95209e+07 317 1.93584e+07 6.80487e+06 0.00415023 1.86342e+07 49.047 0.0393838 0.995184 0 51.5303 GTEX-1F75A-1826-SM-7SB8G 1 C1 2 pieces, mainly fibroadipose elements; few minute ductal elements, encircled 7.5 Breast Breast - Mammary Tissue 0008367 1287 1245 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987292 261022 0.95942 0.990513 0.630489 25510 1 76 0.00298441 128 0 6.70889e+07 0.0403045 313716 6.77315e+07 7.62962e+06 25565 3.33231e+07 0 0.328931 0.990513 0.624508 6.70889e+07 0.0046713 1.46151e+07 9.65111e+06 1.478e+07 129 1.48443e+07 8.36812e+06 0.00382511 1.47575e+07 49.8534 0.00463176 0.993734 0 50.2805 GTEX-1F75A-2026-SM-9KNTR 3 C1 2 pieces, advanced autolysis; ~30% adherent/interstitial fat, rep. delineated 5.7 Adrenal Gland Adrenal Gland 0002369 1290 1243 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992901 426610 0.964718 0.994256 0.821945 23352 1 76 0.00304376 370 0 1.03221e+08 0.0351145 1.0482e+07 1.03818e+08 1.17229e+07 23377 5.14371e+07 0 0.142772 0.994256 0.817225 1.03221e+08 0.0043024 2.24093e+07 2.58959e+07 2.28335e+07 349 2.28865e+07 9.55542e+06 0.00367222 2.24956e+07 49.5693 0.100966 0.995611 0 50.4689 GTEX-1F75A-2826-SM-7MXTS 1 C1 2 pieces, focal areas are score 2. Spermatogenesis is present 5.7 Testis Testis 0000473 1302 1239 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757,LCSET-7087 04/25/2015 TruSeq.v1 RNASEQ 0.98927 280629 0.930252 0.99218 0.727521 35106 1 76 0.00290283 284 0 1.26005e+08 0.0694505 1.53033e+06 1.26998e+08 1.40704e+07 35192 6.26984e+07 0 0.202731 0.99218 0.721832 1.26005e+08 0.00361514 2.61269e+07 1.90912e+07 2.61701e+07 290 2.63174e+07 1.84111e+07 0.00325794 2.63037e+07 49.987 0.01205 0.995091 0 50.0413 GTEX-1F75A-2926-SM-7MXVN 1 C1 4 pieces, no abnnormalities 7 Brain Brain - Cerebellum 0002037 1304 1237 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976265 240188 0.946453 0.985658 0.756675 23272 1 76 0.00329364 126 0 6.90595e+07 0.0531129 1.03995e+06 7.00644e+07 1.15741e+07 23292 3.41199e+07 0 0.189779 0.985658 0.745822 6.90595e+07 0.00439702 1.47541e+07 1.4277e+07 1.48186e+07 153 1.50969e+07 9.08299e+06 0.00384007 1.50688e+07 49.9534 0.0148427 0.99505 0 50.109 GTEX-1F75A-3026-SM-9KNU2 1 C1 4 pieces, no abnormalities 7 Brain Brain - Cortex 0001870 1306 1236 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993371 338190 0.966514 0.99427 0.833913 24687 1 76 0.00270209 270 0 1.07336e+08 0.0329819 2.85214e+06 1.07954e+08 1.05922e+07 24702 5.35012e+07 0 0.1326 0.99427 0.829135 1.07336e+08 0.00319308 2.35533e+07 1.43208e+07 2.3781e+07 308 2.37587e+07 1.44847e+07 0.00294736 2.36569e+07 49.8927 0.0264198 0.995169 0 50.2405 GTEX-1F75B-0003-SM-7J3AW C1 Blood Whole Blood 0013756 633 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6780,LCSET-7006 03/30/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F75B-0003-SM-7MA79 C1 Blood Whole Blood 0013756 633 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F75B-0008-SM-EAZCP C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 726 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993772 457913 0.983218 0.994674 0.863747 21365 1 76 0.00165986 293 0 1.18707e+08 0.0164645 339593 1.19343e+08 8.79725e+06 21390 5.91859e+07 0 0.119471 0.994674 0.859146 1.18707e+08 0.00260181 2.68482e+07 1.12958e+07 2.69309e+07 299 2.69582e+07 3.1584e+07 0.00213041 2.69242e+07 49.9685 0.00284552 0.995575 0 50.0769 GTEX-1F75B-0011-R11a-SM-9OSXB C1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 655 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 EXCLUDE 0.989423 472965 0.961119 0.993122 0.849714 20621 1 76 0.00224123 366 0 8.33902e+07 0.0387503 1.58306e+07 8.39677e+07 7.77287e+06 20629 4.14673e+07 0 0.111405 0.993122 0.84387 8.33902e+07 0.00379436 1.82306e+07 3.53963e+07 1.86649e+07 347 1.85048e+07 3.07525e+06 0.0030149 1.86255e+07 50.1625 0.188532 0.996822 0 50.5885 GTEX-1F75B-0011-R1b-SM-9QEIP C1, A1 5.7 Brain Brain - Hippocampus 0001954 655 BP-60799 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 EXCLUDE 0.989383 30524 0.970172 0.992921 0.87765 14871 1 76 0.00162048 81 0 8.92681e+06 0.0297787 1.4669e+06 8.99045e+06 470847 14874 4.44079e+06 0 0.0925213 0.992921 0.871438 8.92681e+06 0.00364576 1.98173e+06 1.83098e+06 2.03942e+06 109 2.00993e+06 331963 0.00262951 2.03402e+06 50.2979 0.163162 0.99646 0 50.7173 GTEX-1F75B-0011-R2a-SM-ARL8I C1, A1 6.1 Brain Brain - Substantia nigra 0002038 655 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991156 475672 0.969715 0.991496 0.842351 20118 1 76 0.00160188 377 0 8.20088e+07 0.0301096 1.13745e+07 8.27121e+07 7.607e+06 20131 4.08095e+07 0 0.127364 0.991496 0.835188 8.20088e+07 0.00210006 1.78796e+07 2.82531e+07 1.82388e+07 348 1.82103e+07 6.33126e+06 0.00185088 1.79103e+07 49.5848 0.13752 0.991836 0 50.4972 GTEX-1F75B-0011-R5a-SM-9QEHC C1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 655 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.98984 328603 0.961915 0.992887 0.791554 24416 1 76 0.00185136 268 0 8.08963e+07 0.0377937 3.69562e+06 8.14758e+07 4.05508e+06 24450 4.0244e+07 0 0.170361 0.992887 0.785924 8.08963e+07 0.00375054 1.77286e+07 1.36638e+07 1.79077e+07 262 1.79414e+07 9.50963e+06 0.00279804 1.79054e+07 49.9498 0.0453585 0.995935 0 50.2513 GTEX-1F75B-0011-R6a-SM-ARZMI C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 655 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.983205 517136 0.971182 0.986079 0.803847 20843 1 76 0.00210017 271 0 7.20534e+07 0.028706 1.06349e+07 7.30706e+07 3.0251e+06 20855 3.57714e+07 0 0.167335 0.986079 0.792657 7.20534e+07 0.00343116 1.5123e+07 4.34947e+07 1.58561e+07 274 1.55711e+07 4.99588e+06 0.00276373 1.55336e+07 49.9397 0.145543 0.988953 0 51.1833 GTEX-1F75B-0011-R7a-SM-ARU84 C1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 655 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.994116 199290 0.978017 0.995708 0.867871 19114 1 76 0.00168718 146 0 5.27493e+07 0.0218788 7.15564e+06 5.29766e+07 1.80446e+06 19118 2.62852e+07 0 0.110146 0.995708 0.864146 5.27493e+07 0.00251725 1.16362e+07 1.21322e+07 1.20685e+07 189 1.18393e+07 3.21152e+06 0.00210155 1.19121e+07 50.1532 0.135072 0.997301 0 50.9118 GTEX-1F75B-0126-SM-9KNVL 1 C1 6 pieces; 1% to 5% dermal fat; ~34 micron thick epidermis 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 726 429 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992328 251090 0.975615 0.993589 0.785075 24327 1 76 0.00248591 289 0 9.96847e+07 0.0241094 663636 1.00328e+08 1.05508e+07 24363 4.9674e+07 0 0.19054 0.993589 0.780042 9.96847e+07 0.0037201 2.19405e+07 1.14162e+07 2.20754e+07 285 2.20964e+07 1.68397e+07 0.00310222 2.20381e+07 49.934 0.00661467 0.994849 0 50.1532 GTEX-1F75B-0426-SM-7PC38 2 C1 2 pieces; fibrous plaque and medial calcification (arrows); ~0.5 mm attached adventitia 7.5 Blood Vessel Artery - Tibial 0007610 729 427 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986085 436810 0.974759 0.989839 0.831469 23006 1 76 0.00330919 214 0 9.44588e+07 0.0248384 280607 9.54285e+07 1.56303e+07 23035 4.68568e+07 0 0.14329 0.989839 0.82302 9.44588e+07 0.00468358 2.02519e+07 8.8451e+06 2.04539e+07 218 2.06088e+07 1.87073e+07 0.00399378 2.04338e+07 49.7868 0.0029405 0.993593 0 50.2482 GTEX-1F75B-0526-SM-7P8T5 1 C1 2 pieces; small amounts of internal fat, scattered atrophic fibers 7.8 Muscle Muscle - Skeletal 0011907 734 423 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.951185 326780 0.98 0.973383 0.862848 21580 1 76 0.00373322 215 0 8.92649e+07 0.0197432 1.18599e+06 9.17058e+07 1.29709e+07 21595 4.35047e+07 0 0.117152 0.973383 0.839882 8.92649e+07 0.00734613 1.92565e+07 9.83844e+06 1.91698e+07 225 2.02592e+07 1.85356e+07 0.00549848 2.01343e+07 49.8453 0.0129326 0.995581 0 49.8871 GTEX-1F75B-0626-SM-7SB8A 1 C1 2 pieces; mature adipose tissue and dense fibrotic stroma with ductal structures (outlined), suggestive of gynecomastoid stromal and ductal hyperplasia 6 Breast Breast - Mammary Tissue 0008367 745 412 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989657 204611 0.966121 0.991606 0.65485 24750 1 76 0.00292486 140 0 8.08172e+07 0.0336103 401052 8.15013e+07 9.07156e+06 24802 4.01923e+07 0 0.311271 0.991606 0.649353 8.08172e+07 0.00425546 1.76718e+07 1.02643e+07 1.78899e+07 162 1.79094e+07 9.92991e+06 0.00358886 1.78053e+07 49.8542 0.0049208 0.993555 0 50.3067 GTEX-1F75B-0726-SM-7PC3R 1 C1 6 pieces; essentially well trimmed with small amounts of dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 747 410 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986336 455835 0.976811 0.989972 0.78616 24345 1 76 0.0033879 222 0 9.92979e+07 0.0228915 724893 1.00304e+08 1.70287e+07 24393 4.92824e+07 0 0.190652 0.989972 0.778276 9.92979e+07 0.00479955 2.1848e+07 1.15959e+07 2.2061e+07 244 2.22463e+07 1.69127e+07 0.00409113 2.20128e+07 49.7362 0.00722698 0.993607 0 50.2425 GTEX-1F75B-0826-SM-9QEIT 1 C1 2 pieces; focal interstitial lymphocytic infiltrate (arrow) 6.3 Thyroid Thyroid 0002046 750 408 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.99042 235311 0.965673 0.993132 0.772064 24662 1 76 0.00188449 276 0 9.26534e+07 0.0339107 656790 9.32942e+07 4.67134e+06 24701 4.60874e+07 0 0.193609 0.993132 0.766761 9.26534e+07 0.00404131 2.02e+07 8.80446e+06 2.02902e+07 257 2.03768e+07 1.48656e+07 0.00295996 2.03441e+07 49.9598 0.00703999 0.995845 0 50.1114 GTEX-1F75B-1026-SM-9JGFS 1 C1 2 pieces; one contains bronchus with cartilage and vessel (outlined); emphysematous and athelectatic changes; congestion 7.2 Lung Lung 0008952 757 402 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992932 352459 0.974348 0.994275 0.755585 28432 1 76 0.00213609 381 0 1.5239e+08 0.0251315 639414 1.53268e+08 7.04116e+06 28507 7.59168e+07 0 0.218763 0.994275 0.75126 1.5239e+08 0.00334222 3.38721e+07 1.91182e+07 3.41127e+07 371 3.41315e+07 2.32081e+07 0.00273834 3.40469e+07 49.938 0.00417187 0.995619 0 50.1769 GTEX-1F75B-1126-SM-7RHGP 1 C1 2 pieces 5.6 Heart Heart - Atrial Appendage 0006631 757 402 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992095 106848 0.984463 0.994484 0.862291 20629 1 76 0.00215883 365 0 8.79473e+07 0.0154439 8.06239e+06 8.84351e+07 8.34117e+06 20638 4.37963e+07 0 0.122172 0.994484 0.857535 8.79473e+07 0.00382326 1.94545e+07 1.79549e+07 1.98723e+07 346 1.98633e+07 6.09888e+06 0.00298905 1.96365e+07 49.7128 0.0911674 0.996873 0 50.5312 GTEX-1F75B-1226-SM-7MXTW 1 C1 2 pieces; lobulated adipose tissue with fibrovascular component 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 758 402 BP-57475 RNA Extraction from Paxgene-derived Lysate Plate Based 10/23/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975901 159056 0.97522 0.985939 0.804032 23729 1 76 0.00303237 209 0 9.35744e+07 0.0244941 926262 9.49089e+07 1.45011e+07 23756 4.62145e+07 0 0.171188 0.985939 0.792727 9.35744e+07 0.00440399 2.04002e+07 1.53635e+07 2.05422e+07 254 2.09205e+07 1.65401e+07 0.0037112 2.09148e+07 49.9933 0.00975948 0.995977 0 50.1734 GTEX-1F75B-2726-SM-7P8QO 3 C1 6 pieces; severely autolyzed mucosa, moderately autolyzed muscularis 5.7 Colon Colon - Transverse 0001157 780 385 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.949398 219678 0.967829 0.951772 0.804199 24084 1 76 0.00335078 165 0 8.23765e+07 0.0316107 1.78616e+06 8.65506e+07 1.34811e+07 24109 4.09497e+07 0 0.16363 0.951772 0.765414 8.23765e+07 0.00415929 1.77656e+07 1.22322e+07 1.80865e+07 202 1.81352e+07 1.3179e+07 0.00375403 1.79138e+07 49.6929 0.0206372 0.954147 0 50.4475 GTEX-1F75B-3026-SM-7PBZ7 1 C1 4 pieces 6.7 Brain Brain - Cortex 0001870 787 379 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988896 509451 0.960649 0.992538 0.822016 23727 1 76 0.00270616 370 0 1.00799e+08 0.0391199 8.0136e+06 1.01557e+08 1.3842e+07 23747 5.01132e+07 0 0.138634 0.992538 0.815882 1.00799e+08 0.00460474 2.16826e+07 3.58856e+07 2.22973e+07 342 2.2113e+07 8.89689e+06 0.00365196 2.21614e+07 50.0547 0.0789074 0.99618 0 50.6988 GTEX-1F75B-3126-SM-9JGGE 2 C1 1 piece; moderately autolyzed adenohypophysis (75% tissue) and neurohypophysis (25% tissue) 6.7 Pituitary Pituitary 0000007 787 380 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993631 384704 0.960786 0.99474 0.740482 26566 1 76 0.00211943 272 0 1.17482e+08 0.038914 1.22498e+06 1.18103e+08 5.91403e+06 26627 5.855e+07 0 0.220304 0.99474 0.736587 1.17482e+08 0.00291825 2.52246e+07 1.24902e+07 2.54046e+07 323 2.54259e+07 1.78276e+07 0.00251839 2.53258e+07 49.9014 0.0103722 0.99585 0 50.1778 GTEX-1F75I-0001-SM-EVR3C B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -180 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990167 2.20873e+06 0.958496 0.992149 0.804412 23286 1 76 0.00241192 287 0 1.22245e+08 0.0408377 704130 1.23212e+08 9.02245e+06 23326 6.08327e+07 0 0.154085 0.992149 0.798096 1.22245e+08 0.00366484 2.68813e+07 1.47373e+07 2.71115e+07 295 2.71415e+07 2.79156e+07 0.00303713 2.70754e+07 49.939 0.00571478 0.994131 0 50.2131 GTEX-1F75I-0004-SM-7MA7F B1 Blood Whole Blood 0013756 -180 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F75I-0004-SM-7OO5C B1 Blood Whole Blood 0013756 -180 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-6914 04/06/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1F75I-0004-SM-DLIPB B1 Blood Whole Blood 0013756 -180 BP-56015 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1F75I-0005-SM-ADEHC B1 6.9 Blood Whole Blood 0013756 -180 BP-56007 RNA isolation_PAXgene Blood RNA (Manual) 08/18/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.965334 702924 0.970251 0.971738 0.819999 17288 1 76 0.0034142 194 0 1.02682e+08 0.0289178 365321 1.05668e+08 1.13062e+07 17296 5.08352e+07 0 0.150252 0.971738 0.796823 1.02682e+08 0.00362846 2.32776e+07 1.28621e+08 2.34669e+07 204 2.37517e+07 2.62028e+07 0.00352062 2.36237e+07 49.865 0.00345725 0.978141 0 50.2024 GTEX-1F75I-0008-SM-EWRMH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 440 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.990539 505539 0.983322 0.993462 0.864361 22112 1 76 0.00215614 295 0 1.37905e+08 0.0163658 304440 1.38813e+08 9.67865e+06 22139 6.86416e+07 0 0.118961 0.993462 0.85871 1.37905e+08 0.00278605 3.09767e+07 1.22834e+07 3.12702e+07 322 3.14012e+07 3.60322e+07 0.0024628 3.12022e+07 49.8411 0.00219317 0.996386 0 50.2358 GTEX-1F75I-0126-SM-9WPPW 1 B1 2 pieces; adrenal cortex and ~5% attached external fat 9.3 Adrenal Gland Adrenal Gland 0002369 235 908 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989441 173970 0.977822 0.990925 0.820146 22263 1 76 0.00656662 127 0 6.77601e+07 0.0218701 1.41433e+06 6.83807e+07 1.07258e+07 22280 3.37532e+07 0 0.157676 0.990925 0.812703 6.77601e+07 0.00677647 1.48893e+07 9.31139e+06 1.49905e+07 144 1.49593e+07 9.88998e+06 0.00667139 1.50079e+07 50.0811 0.0206831 0.99241 0 50.1693 GTEX-1F75I-0226-SM-7MKHQ 1 B1 2 pieces; congestion 7.7 Spleen Spleen 0002106 237 906 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756,LCSET-7085 04/25/2015 TruSeq.v1 RNASEQ 0.988134 296881 0.965733 0.989828 0.791088 25095 1 76 0.00338433 275 0 1.05619e+08 0.0328145 500720 1.06704e+08 8.75388e+06 25135 5.25130e+07 0 0.174645 0.989828 0.783041 1.05619e+08 0.00395033 2.31754e+07 1.42461e+07 2.3381e+07 287 2.34504e+07 1.67439e+07 0.00366684 2.32778e+07 49.8153 0.00469259 0.991523 0 50.2208 GTEX-1F75I-0326-SM-9YFLU 1 B1 6 pieces; ~5% to 10% dermal fat 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 449 694 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.9926 304140 0.972585 0.994206 0.774573 24817 1 76 0.0026424 285 0 1.08241e+08 0.0271631 1.14922e+06 1.08872e+08 3.77124e+06 24856 5.39188e+07 0 0.198012 0.994206 0.770085 1.08241e+08 0.00395007 2.3836e+07 1.02176e+07 2.40614e+07 322 2.4061e+07 1.65184e+07 0.00329518 2.39991e+07 49.9356 0.0105557 0.995813 0 50.2353 GTEX-1F75I-0426-SM-7PC3S 1 B1 5 pieces; two larger pieces consist of fibrovascular component and 5% and 60% mature adipose tissue; 2 of 3 smaller pieces represent fibrovascular tissue; the remaining one consists of adipose tissue with small fibrovascular component and adnexal ducts (outlined) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 450 693 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988425 401028 0.97703 0.991336 0.824886 24109 1 76 0.00358805 216 0 9.6419e+07 0.0226661 882680 9.72617e+07 1.58554e+07 24136 4.78912e+07 0 0.152144 0.991336 0.81774 9.6419e+07 0.0047228 2.11781e+07 9.87526e+06 2.14426e+07 239 2.15404e+07 1.76456e+07 0.00415376 2.13497e+07 49.7776 0.00907531 0.994247 0 50.3104 GTEX-1F75I-0526-SM-7RHI3 1 B1 2 pieces; well trimmed 7.9 Muscle Muscle - Skeletal 0011907 450 693 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99339 137434 0.982577 0.995018 0.877707 19831 1 76 0.00242994 278 0 1.00424e+08 0.0172278 1.53226e+06 1.00927e+08 9.15557e+06 19844 5.00547e+07 0 0.104869 0.995018 0.873334 1.00424e+08 0.00358221 2.20412e+07 1.23073e+07 2.22446e+07 279 2.22419e+07 1.98089e+07 0.00300513 2.21874e+07 49.9386 0.0151819 0.996646 0 50.2296 GTEX-1F75I-0626-SM-7PBZ8 1 B1 2 pieces; up to 0.6mm rim of adventitia and one small fragment of attached skeletal muscle (outlined) 6.2 Blood Vessel Artery - Tibial 0007610 452 691 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98463 144286 0.976774 0.988387 0.856149 21081 1 76 0.00282392 159 0 7.6161e+07 0.0228522 256883 7.70558e+07 1.01666e+07 21090 3.78269e+07 0 0.120625 0.988387 0.846207 7.6161e+07 0.00531775 1.63135e+07 5.79192e+06 1.64289e+07 173 1.64534e+07 1.54265e+07 0.00406609 1.65583e+07 50.1589 0.00333373 0.992143 0 50.1763 GTEX-1F75I-0926-SM-7MXUU 1 B1 2 pieces; no pathologic changes 5.9 Thyroid Thyroid 0002046 508 635 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976714 153263 0.962784 0.986261 0.684894 24119 1 76 0.00319131 128 0 7.52688e+07 0.0369768 138768 7.63173e+07 1.18295e+07 24165 3.71947e+07 0 0.277891 0.986261 0.675484 7.52688e+07 0.00429254 1.62729e+07 8.36429e+06 1.62682e+07 141 1.65793e+07 1.027e+07 0.0037366 1.66266e+07 50.0711 0.0018183 0.995808 0 49.9927 GTEX-1F75I-1026-SM-7SB8B 1 B1 2 pieces; lobulated mature adipose tissue 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 509 634 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.9913 308115 0.967708 0.993545 0.756267 23313 1 76 0.00272393 166 0 8.16843e+07 0.0320666 777916 8.2215e+07 8.93546e+06 23345 4.06622e+07 0 0.21144 0.993545 0.751385 8.16843e+07 0.00430641 1.7845e+07 1.35763e+07 1.81466e+07 187 1.81275e+07 1.19782e+07 0.00351338 1.80397e+07 49.8786 0.00946197 0.995789 0 50.4189 GTEX-1F75I-1126-SM-9WYUO 1 B1 2 pieces; mild interstitial fibrosis ; fatty streaks consistent with fatty degeneration (rep arrows) 8 Heart Heart - Left Ventricle 0006566 510 633 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994834 256566 0.982988 0.996033 0.85781 20914 1 76 0.0025819 267 0 1.00847e+08 0.0168092 2.00735e+06 1.01248e+08 6.57874e+06 20926 5.02811e+07 0 0.125178 0.996033 0.854407 1.00847e+08 0.00449056 2.22231e+07 1.8266e+07 2.23905e+07 306 2.2366e+07 1.60459e+07 0.00353508 2.23325e+07 49.9625 0.019826 0.997232 0 50.1876 GTEX-1F75I-1226-SM-9YFM4 1 B1 6 pieces; up to 0.7mm attached adventitia; no atherosclerosis 7.3 Blood Vessel Artery - Aorta 0001496 512 631 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992804 330204 0.972948 0.994478 0.807964 22832 1 76 0.0025108 282 0 1.14399e+08 0.0266695 376986 1.15034e+08 4.09384e+06 22865 5.69753e+07 0 0.164985 0.994478 0.803502 1.14399e+08 0.00384941 2.47176e+07 8.58521e+06 2.50085e+07 329 2.50019e+07 2.07997e+07 0.00317898 2.49075e+07 49.9054 0.00327717 0.996151 0 50.2925 GTEX-1F75I-1326-SM-7PBZX 1 B1 2 pieces; ~5% and 15% internal fat 7.2 Heart Heart - Atrial Appendage 0006631 513 630 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987606 183738 0.980436 0.990949 0.815793 23303 1 76 0.00331181 271 0 1.32447e+08 0.0193579 2.67516e+06 1.33656e+08 1.60298e+07 23325 6.58822e+07 0 0.164643 0.990949 0.808409 1.32447e+08 0.00502351 2.83123e+07 4.07074e+07 2.83912e+07 317 2.82941e+07 1.7515e+07 0.00416477 2.87581e+07 50.4066 0.0200152 0.994292 0 50.0696 GTEX-1F75I-1526-SM-7PBYJ 1 B1 6 pieces; target muscularis; 3 of 6 pieces with attached adventitia (outlined) 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 522 621 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987421 142959 0.974769 0.991585 0.834316 22589 1 76 0.00295634 217 0 8.72704e+07 0.0249575 568156 8.8011e+07 1.2315e+07 22610 4.33455e+07 0 0.140453 0.991585 0.827295 8.72704e+07 0.00514248 1.88149e+07 7.72267e+06 1.89909e+07 222 1.90395e+07 1.48643e+07 0.00404482 1.91039e+07 50.0845 0.00645551 0.995749 0 50.2328 GTEX-1F75I-1626-SM-7RHI2 1 B1 6 pieces, well trimmed target muscularis 7 Esophagus Esophagus - Muscularis 0004648 523 620 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99246 166087 0.973376 0.994359 0.80749 23148 1 76 0.00247298 281 0 1.05772e+08 0.0263959 1.27508e+06 1.06372e+08 8.93194e+06 23175 5.26876e+07 0 0.165886 0.994359 0.802935 1.05772e+08 0.00392522 2.29145e+07 1.04027e+07 2.31072e+07 297 2.30574e+07 1.53979e+07 0.00319772 2.31441e+07 50.0938 0.011987 0.996258 0 50.2093 GTEX-1F75I-1726-SM-7MKGW 1 B1 6 pieces; ~0.4 mm thick squamous epithelium; many submucosal glands 9.2 Esophagus Esophagus - Mucosa 0006920 525 618 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.97718 410741 0.976944 0.984381 0.843381 23315 1 76 0.00384908 278 0 1.08312e+08 0.0224744 377428 1.10031e+08 1.61126e+07 23332 5.35931e+07 0 0.133564 0.984381 0.830208 1.08312e+08 0.0056307 2.41743e+07 2.24851e+07 2.44283e+07 263 2.47938e+07 2.32943e+07 0.00473338 2.45774e+07 49.7809 0.0034302 0.991583 0 50.2613 GTEX-1F75I-1826-SM-7MKGX 2 B1 6 pieces; one piece lacks surface mucosa; focal superficial mucosal fresh hemorrhage (rep arrows) 6.3 Stomach Stomach 0000945 526 617 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979645 335075 0.971751 0.986399 0.817183 23689 1 76 0.00422095 245 0 8.32111e+07 0.0278943 1.24157e+06 8.43585e+07 1.27888e+07 23707 4.11894e+07 0 0.154569 0.986399 0.806068 8.32111e+07 0.00532421 1.84278e+07 3.20936e+07 1.86768e+07 203 1.89261e+07 1.57238e+07 0.0047688 1.8716e+07 49.7208 0.0147178 0.993153 0 50.3355 GTEX-1F75I-2026-SM-7SB7N 1 B1 2 pieces; dense fibrous stroma and ductal structures consistenet with gynecomastoid stromal and ductal hyperplasia 6.3 Breast Breast - Mammary Tissue 0008367 534 609 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989136 129976 0.967969 0.992019 0.77539 23819 1 76 0.00271193 139 0 6.1436e+07 0.031807 260415 6.19302e+07 6.89196e+06 23854 3.05461e+07 0 0.19258 0.992019 0.769201 6.1436e+07 0.00429338 1.33182e+07 7.25835e+06 1.35203e+07 139 1.3511e+07 1.08883e+07 0.00350036 1.35025e+07 49.9842 0.00420497 0.994901 0 50.3767 GTEX-1F75I-2226-SM-7SB8U 1 B1 6 pieces; 4 of 6 pieces contain 5% to 20% subcutaneous/dermal fat (outlined) 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 537 606 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989886 386106 0.966412 0.992462 0.713443 24513 1 76 0.00278646 194 0 8.863e+07 0.0333609 528229 8.93032e+07 9.94714e+06 24558 4.407e+07 0 0.252969 0.992462 0.708065 8.863e+07 0.0047219 1.94334e+07 1.23721e+07 1.96404e+07 180 1.96818e+07 1.36949e+07 0.00375167 1.96188e+07 49.9199 0.00591501 0.995038 0 50.2649 GTEX-1F75I-2326-SM-A8N7V 1 B1 2 pieces; spermatogenesis preserved 6.2 Testis Testis 0000473 538 605 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986677 337970 0.927758 0.98852 0.728328 33847 1 76 0.0109007 178 0 1.01507e+08 0.0718932 1.39506e+06 1.02686e+08 1.78292e+07 33906 5.04864e+07 0 0.199431 0.98852 0.719967 1.01507e+08 0.0104903 2.06812e+07 1.64527e+07 2.09224e+07 183 2.09701e+07 1.54385e+07 0.0106959 2.08054e+07 49.8028 0.0135857 0.990364 0 50.2899 GTEX-1F75I-2426-SM-9WPOY 2 B1 6 pieces; focally moderate autolysis; superficial multifocal mucosal fresh hemorrhage (rep arrows) 8 Colon Colon - Transverse 0001157 542 601 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986229 229605 0.972147 0.987881 0.801829 23981 1 76 0.0066648 171 0 7.25871e+07 0.0274474 501107 7.34776e+07 1.16636e+07 24011 3.61366e+07 0 0.170319 0.987881 0.792111 7.25871e+07 0.00698821 1.61157e+07 1.10036e+07 1.62152e+07 147 1.6214e+07 1.26446e+07 0.00682624 1.62264e+07 50.0192 0.00681986 0.989532 0 50.1539 GTEX-1F75I-2526-SM-9WPOZ 2 B1 6 pieces; moderately and focally severely autolyzed mucosa; well representaion of target lymphoid aggregates 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 540 603 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986833 219205 0.959453 0.988653 0.699616 25286 1 76 0.0066459 126 0 7.28912e+07 0.0402107 248092 7.37278e+07 1.12903e+07 25333 3.62762e+07 0 0.259837 0.988653 0.691678 7.28912e+07 0.00728002 1.59001e+07 9.32009e+06 1.60066e+07 131 1.60303e+07 1.02859e+07 0.00696238 1.60004e+07 49.9533 0.00336497 0.990472 0 50.167 GTEX-1F75I-5004-SM-AN46I B1 Muscle Muscle - Skeletal 0011907 453 ChIP-Seq GTEX-1F75I-5013-SM-AN46G B1 Heart Heart - Left Ventricle 0006566 514 ChIP-Seq GTEX-1F75W-0004-SM-7J3AH B1 Blood Whole Blood 0013756 724 BP-56124 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F75W-0004-SM-7MA6T B1 Blood Whole Blood 0013756 724 BP-56124 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F75W-0005-SM-A9SMP B1 8.2 Blood Whole Blood 0013756 724 BP-56159 RNA isolation_PAXgene Blood RNA (Manual) 08/22/2014 LCSET-7847,LCSET-8170 11/17/2015 TruSeq.v1 RNASEQ 0.979515 1.60097e+06 0.95266 0.983359 0.752612 21058 1 76 0.00331784 209 0 1.19152e+08 0.0466347 399245 1.21169e+08 1.03491e+07 21082 5.91419e+07 0 0.200048 0.983359 0.740087 1.19152e+08 0.00457487 2.6414e+07 1.19775e+08 2.66817e+07 220 2.685e+07 2.54941e+07 0.0039439 2.66929e+07 49.8533 0.00329496 0.987202 0 50.2521 GTEX-1F75W-0008-SM-EAZCU B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 894 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992794 227401 0.981203 0.993817 0.863685 19279 1 76 0.00168189 145 0 6.5879e+07 0.0184763 326335 6.62889e+07 4.77528e+06 19292 3.28412e+07 0 0.117518 0.993817 0.858344 6.5879e+07 0.00271698 1.48399e+07 6.91734e+06 1.49072e+07 141 1.48986e+07 1.72793e+07 0.0021989 1.49148e+07 50.0271 0.00492292 0.99484 0 50.1131 GTEX-1F75W-0011-R10b-SM-ARU7Z B1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 724 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992729 441767 0.969707 0.99403 0.865455 22857 1 76 0.00175801 370 0 8.83008e+07 0.029925 5.54823e+06 8.88311e+07 3.02478e+06 22869 4.40003e+07 0 0.104252 0.99403 0.860288 8.83008e+07 0.00229605 1.93481e+07 1.54652e+07 1.97044e+07 332 1.96293e+07 9.47817e+06 0.00202667 1.9512e+07 49.8501 0.0624582 0.995331 0 50.4561 GTEX-1F75W-0011-R11b-SM-AHZ34 B1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 724 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98764 761985 0.945444 0.989289 0.791047 24466 1 76 0.00701203 375 0 1.35002e+08 0.0542689 3.94412e+06 1.36464e+08 2.56567e+07 24499 6.71575e+07 0 0.154397 0.989289 0.782574 1.35002e+08 0.00823677 2.8727e+07 3.35542e+07 2.93016e+07 332 2.92333e+07 1.36102e+07 0.00762338 2.89842e+07 49.7861 0.0289023 0.990939 0 50.4951 GTEX-1F75W-0011-R1a-SM-ARU81 B1, A1 5.9 Brain Brain - Hippocampus 0001954 724 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991582 219215 0.97518 0.992967 0.859963 20899 1 76 0.00177374 263 0 6.67194e+07 0.024678 8.78968e+06 6.7192e+07 2.42888e+06 20907 3.32499e+07 0 0.115217 0.992967 0.853915 6.67194e+07 0.00228632 1.44709e+07 1.62351e+07 1.51768e+07 291 1.50013e+07 4.01184e+06 0.00202968 1.4703e+07 49.498 0.130814 0.994352 0 51.1905 GTEX-1F75W-0011-R5b-SM-9QEGV B1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 724 BP-59542 RNA isolation_PAXgene Tissue miRNA 01/13/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989286 565707 0.95974 0.992796 0.837555 23288 1 76 0.00170352 267 0 9.03514e+07 0.0400432 5.81171e+06 9.10071e+07 4.51241e+06 23299 4.49231e+07 0 0.122185 0.992796 0.831521 9.03514e+07 0.00371636 1.94532e+07 2.63459e+07 1.98459e+07 329 1.988e+07 8.14097e+06 0.00270638 1.96853e+07 49.7539 0.06386 0.996306 0 50.4997 GTEX-1F75W-0011-R6a-SM-9QEI5 B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 724 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.99054 461518 0.960721 0.993499 0.832039 23759 1 76 0.00167086 269 0 9.22254e+07 0.0390136 6.03685e+06 9.28289e+07 4.44417e+06 23777 4.588e+07 0 0.128682 0.993499 0.82663 9.22254e+07 0.0037513 1.9977e+07 1.99888e+07 2.01992e+07 323 2.0233e+07 9.13553e+06 0.00270798 2.0164e+07 49.9146 0.0650321 0.996458 0 50.2766 GTEX-1F75W-0011-R7a-SM-9QEI6 B1, A1 6.9 Brain Brain - Putamen (basal ganglia) 0001874 724 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990554 544245 0.959134 0.99348 0.841642 22593 1 76 0.00165228 266 0 8.46436e+07 0.0406878 6.51879e+06 8.51991e+07 4.13145e+06 22606 4.21254e+07 0 0.117491 0.99348 0.836155 8.46436e+07 0.00368105 1.83172e+07 2.66016e+07 1.86464e+07 327 1.85474e+07 7.01967e+06 0.00266368 1.86197e+07 50.0973 0.0765125 0.996406 0 50.4453 GTEX-1F75W-0011-R8a-SM-9QEI4 B1, A1 6.1 Brain Brain - Hypothalamus 0001898 724 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991295 306127 0.961699 0.994063 0.845652 23703 1 76 0.0017434 270 0 8.1483e+07 0.0380086 5.17328e+06 8.19697e+07 4.02948e+06 23722 4.05611e+07 0 0.116047 0.994063 0.840632 8.1483e+07 0.00369366 1.7802e+07 1.60376e+07 1.80589e+07 306 1.8033e+07 8.25647e+06 0.00271582 1.80114e+07 49.9701 0.0631121 0.99683 0 50.3582 GTEX-1F75W-0126-SM-9KNVT 0 B1 6 pieces; well trimmed; dermal fat 5% 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 896 904 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 EXCLUDE 0.992195 332787 0.970352 0.993636 0.732941 25813 1 76 0.00265181 215 0 9.67748e+07 0.0293937 315672 9.73946e+07 1.10286e+07 25867 4.81956e+07 0 0.23741 0.993636 0.728277 9.67748e+07 0.00395177 2.13022e+07 9.35048e+06 2.13597e+07 211 2.14121e+07 1.57033e+07 0.00330085 2.13851e+07 49.9684 0.00324117 0.995077 0 50.0675 GTEX-1F75W-0226-SM-9JGGP 1 B1 2 pieces; 10 & 30% fibrous content 6 Adipose Tissue Adipose - Subcutaneous 0002190 898 902 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992811 421788 0.970859 0.994135 0.724139 25874 1 76 0.00220203 376 0 1.21305e+08 0.0288655 548830 1.2202e+08 6.48078e+06 25927 6.04339e+07 0 0.246721 0.994135 0.719892 1.21305e+08 0.00306947 2.68143e+07 1.1535e+07 2.70688e+07 345 2.70803e+07 1.79472e+07 0.00263517 2.69543e+07 49.8834 0.00449786 0.995458 0 50.2362 GTEX-1F75W-0326-SM-7PC2Q 1 B1 2 pieces; 10 & 30% internal fat content 7.6 Muscle Muscle - Skeletal 0011907 899 901 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987432 419441 0.982034 0.991612 0.879961 20656 1 76 0.0029609 158 0 8.56006e+07 0.0176814 855066 8.63247e+07 1.35672e+07 20670 4.24889e+07 0 0.102074 0.991612 0.87258 8.56006e+07 0.0048888 1.84875e+07 8.50792e+06 1.85919e+07 187 1.87364e+07 1.8965e+07 0.00392078 1.8674e+07 49.9167 0.00990523 0.995793 0 50.1408 GTEX-1F75W-0426-SM-9MQKG 1 B1 2 pieces; 10 & 40% internal & external fat content (026 block trimmed) 7.3 Nerve Nerve - Tibial 0001323 901 899 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984759 181115 0.967173 0.98686 0.726947 23458 1 76 0.00576879 141 0 6.28429e+07 0.0324704 191497 6.36797e+07 7.53735e+06 23491 3.1269e+07 0 0.240226 0.98686 0.717395 6.28429e+07 0.00702624 1.3836e+07 6.03218e+06 1.39205e+07 123 1.39598e+07 9.52542e+06 0.00639618 1.39224e+07 49.933 0.00300719 0.98896 0 50.1521 GTEX-1F75W-0626-SM-7PC13 2 B1 2 pieces; scattered hemorrhage, edema, fibrosis & congestion 6 Lung Lung 0008952 996 804 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.984702 196597 0.968778 0.989172 0.68106 24640 1 76 0.00324368 167 0 9.04859e+07 0.0309456 643558 9.14764e+07 1.2408e+07 24680 4.48835e+07 0 0.287718 0.989172 0.673685 9.04859e+07 0.00527949 1.98385e+07 1.04249e+07 2.00038e+07 187 2.01306e+07 1.14461e+07 0.00425698 2.0103e+07 49.9657 0.00703524 0.993643 0 50.2074 GTEX-1F75W-2126-SM-7RHIA 1 B1 6 pieces; well dissected muscularis 6.8 Colon Colon - Sigmoid 0001159 1092 708 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99145 123430 0.970995 0.993742 0.814194 23662 1 76 0.00234253 273 0 9.81921e+07 0.0287677 1.34913e+06 9.88105e+07 9.51033e+06 23689 4.88873e+07 0 0.156801 0.993742 0.809099 9.81921e+07 0.00383365 2.10185e+07 8.58759e+06 2.12064e+07 308 2.12126e+07 1.46280e+07 0.00308637 2.12242e+07 50.0137 0.0136537 0.996034 0 50.2224 GTEX-1F75W-2726-SM-7SB8H 1 B1 6 pieces; well trimmed 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1107 693 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988832 202217 0.964451 0.991719 0.710218 25199 1 76 0.00273934 140 0 7.10668e+07 0.0353097 409843 7.16602e+07 8.19042e+06 25242 3.53185e+07 0 0.254233 0.991719 0.704337 7.10668e+07 0.00427603 1.55313e+07 9.48571e+06 1.57261e+07 150 1.57604e+07 1.0467e+07 0.00350544 1.56965e+07 49.8985 0.00571926 0.994606 0 50.3115 GTEX-1F75W-3126-SM-7P8SJ 1 B1 2 pieces 6.1 Brain Brain - Cerebellum 0002037 1187 613 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.921382 1.32602e+06 0.893009 0.955605 0.679307 24400 1 76 0.00465671 128 0 7.95714e+07 0.106527 1.5629e+06 8.32681e+07 1.37822e+07 24430 3.82072e+07 0 0.213703 0.955605 0.649149 7.95714e+07 0.00940171 1.54644e+07 6.81149e+07 1.58785e+07 150 1.72198e+07 8.00254e+06 0.00694424 1.66198e+07 49.1134 0.0187694 0.989829 0 50.6606 GTEX-1F7RK-0004-SM-7J3AF B1 Blood Whole Blood 0013756 1207 BP-56124 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F7RK-0004-SM-7MA6R B1 Blood Whole Blood 0013756 1207 BP-56124 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F7RK-0006-SM-ACKV4 B1 8.2 Blood Whole Blood 0013756 1207 BP-56159 RNA isolation_PAXgene Blood RNA (Manual) 08/22/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.961872 1.5975e+06 0.958563 0.963267 0.770117 20021 1 76 0.00298316 267 0 1.36881e+08 0.0401856 646832 1.42101e+08 1.96258e+07 20037 6.8117e+07 0 0.188446 0.963267 0.741828 1.36881e+08 0.00406473 3.15349e+07 2.38565e+08 3.16488e+07 272 3.16691e+07 3.41978e+07 0.00352316 3.17445e+07 50.0595 0.00455192 0.964661 0 50.0901 GTEX-1F7RK-0008-SM-EWRMI B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1330 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.991456 400302 0.983429 0.993959 0.864317 20833 1 76 0.0019382 286 0 1.0019e+08 0.0162691 195620 1.00799e+08 6.35757e+06 20856 4.9891e+07 0 0.119112 0.993959 0.859096 1.0019e+08 0.00259347 2.25206e+07 8.16826e+06 2.27233e+07 270 2.28048e+07 2.5861e+07 0.00225735 2.26576e+07 49.8382 0.0019407 0.996462 0 50.224 GTEX-1F7RK-0011-R10b-SM-ARU7Y B1, A1 6 Brain Brain - Frontal Cortex (BA9) 0009834 1130 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993613 478397 0.969503 0.994875 0.869305 22874 1 76 0.00174568 269 0 8.77421e+07 0.0300257 3.80127e+06 8.8194e+07 2.78841e+06 22887 4.37143e+07 0 0.100197 0.994875 0.86485 8.77421e+07 0.00235598 1.93143e+07 1.2043e+07 1.95331e+07 319 1.94942e+07 1.09225e+07 0.00205044 1.94391e+07 49.9292 0.0431013 0.996138 0 50.2816 GTEX-1F7RK-0011-R11b-SM-9QEI2 B1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 1130 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990003 540740 0.943004 0.992824 0.761815 23593 1 76 0.00195612 272 0 9.33587e+07 0.0565553 1.47861e+06 9.40335e+07 4.49388e+06 23623 4.64309e+07 0 0.181189 0.992824 0.756349 9.33587e+07 0.00405256 1.99449e+07 1.75685e+07 2.01393e+07 277 2.02531e+07 1.21162e+07 0.00300136 2.00643e+07 49.7659 0.0157243 0.995645 0 50.2424 GTEX-1F7RK-0011-R3b-SM-9OSWJ B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1130 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989822 410972 0.96523 0.993051 0.869375 23116 1 76 0.0022598 269 0 9.08981e+07 0.0344538 7.01877e+06 9.15342e+07 9.01896e+06 23129 4.52132e+07 0 0.0958548 0.993051 0.863334 9.08981e+07 0.00367106 1.99482e+07 2.09856e+07 2.02411e+07 318 2.02324e+07 9.86216e+06 0.00296313 2.02088e+07 49.9708 0.0766793 0.996281 0 50.3644 GTEX-1F7RK-0011-R4b-SM-9QEI7 B1, A1 6.2 Brain Brain - Amygdala 0001876 1130 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991124 396749 0.962063 0.993939 0.859054 22787 1 76 0.0016488 270 0 7.79887e+07 0.0375968 5.84035e+06 7.84643e+07 3.89526e+06 22799 3.88128e+07 0 0.103009 0.993939 0.853848 7.79887e+07 0.00371031 1.70596e+07 1.59595e+07 1.72818e+07 295 1.73043e+07 9.22829e+06 0.00267664 1.72266e+07 49.8875 0.0744332 0.996754 0 50.3235 GTEX-1F7RK-0011-R5b-SM-9WG5S B1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 1130 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.993108 568006 0.953916 0.994957 0.842502 23720 1 76 0.00233159 268 0 8.89021e+07 0.0457759 5.08278e+06 8.93527e+07 6.28235e+06 23735 4.42815e+07 0 0.111414 0.994957 0.838253 8.89021e+07 0.00313511 1.92968e+07 2.07768e+07 1.95581e+07 306 1.95288e+07 9.95328e+06 0.0027326 1.94835e+07 49.9419 0.0568845 0.996805 0 50.3363 GTEX-1F7RK-0011-R6b-SM-ARZMG B1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1130 BP-67322 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988754 1.06707e+06 0.954728 0.991485 0.827087 23199 1 76 0.00226288 156 0 6.97252e+07 0.0448238 3.98272e+06 7.0324e+07 2.63590e+06 23210 3.46037e+07 0 0.12764 0.991485 0.820045 6.97252e+07 0.00353216 1.50298e+07 1.74996e+07 1.52129e+07 193 1.53765e+07 9.12303e+06 0.00289577 1.5028e+07 49.4269 0.0566339 0.994217 0 50.3028 GTEX-1F7RK-0126-SM-7PC2S 0 B1 6 pieces; from 5-25% fat (mostly attached), epidermis measures about 49 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1329 1031 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.985557 341619 0.973257 0.989611 0.806623 24600 1 76 0.00330497 216 0 9.17281e+07 0.0264662 502177 9.26911e+07 1.44179e+07 24622 4.54985e+07 0 0.166633 0.989611 0.798243 9.17281e+07 0.00537765 1.99926e+07 1.08928e+07 2.016e+07 220 2.03045e+07 1.53883e+07 0.00433707 2.02073e+07 49.88 0.00541775 0.993665 0 50.2085 GTEX-1F7RK-0326-SM-7RHH7 0 B1 2 pieces; 1 piece includes up to 10% fat/nerve/vessels 8.1 Muscle Muscle - Skeletal 0011907 1332 1028 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99393 262592 0.981323 0.995635 0.868817 20295 1 76 0.00206309 268 0 9.67721e+07 0.0185026 1.36971e+06 9.71963e+07 8.39862e+06 20307 4.82212e+07 0 0.112505 0.995635 0.865025 9.67721e+07 0.00348477 2.11304e+07 1.1752e+07 2.14462e+07 306 2.14047e+07 1.80592e+07 0.00277272 2.13121e+07 49.8916 0.0140922 0.997341 0 50.3708 GTEX-1F7RK-0426-SM-7SB7O 0 B1 2 pieces; includes ~10-15% internal and attached fat 5.7 Nerve Nerve - Tibial 0001323 1333 1027 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986609 172828 0.957537 0.989706 0.69106 24194 1 76 0.00301755 125 0 6.07056e+07 0.0422102 249027 6.13371e+07 7.48657e+06 24240 3.01482e+07 0 0.266477 0.989706 0.683946 6.07056e+07 0.00442584 1.31059e+07 7.18287e+06 1.3289e+07 131 1.33102e+07 7.93890e+06 0.00371949 1.32668e+07 49.9185 0.00405998 0.992802 0 50.3468 GTEX-1F7RK-0526-SM-7PC3T 1 B1 2 pieces; from 30-50% attached vein/fat 7 Blood Vessel Artery - Tibial 0007610 1334 1026 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984906 415281 0.973948 0.989373 0.815466 22756 1 76 0.0033942 210 0 9.21922e+07 0.0256785 483481 9.31824e+07 1.48252e+07 22779 4.57077e+07 0 0.158481 0.989373 0.806801 9.21922e+07 0.00497684 1.96072e+07 7.95538e+06 1.98448e+07 221 2.00172e+07 1.64868e+07 0.00418195 1.98197e+07 49.7522 0.00518854 0.99384 0 50.3012 GTEX-1F7RK-0826-SM-7SB8V 1 B1 2 pieces; alveolar hemorrhage 7.2 Lung Lung 0008952 1382 978 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988313 291733 0.959826 0.990601 0.656549 25971 1 76 0.003389 146 0 8.43963e+07 0.0398275 227462 8.51971e+07 9.85688e+06 26030 4.19103e+07 0 0.303276 0.990601 0.650378 8.43963e+07 0.00463946 1.84496e+07 1.14753e+07 1.86098e+07 164 1.86489e+07 1.08515e+07 0.00401279 1.86004e+07 49.935 0.00266983 0.992889 0 50.2161 GTEX-1F7RK-1326-SM-7PC39 1 B1 6 pieces 6.3 Blood Vessel Artery - Aorta 0001496 1393 967 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984628 417894 0.967093 0.988264 0.773035 24304 1 76 0.00359423 270 0 1.01308e+08 0.0325787 555941 1.02511e+08 1.67977e+07 24338 5.02233e+07 0 0.194059 0.988264 0.763962 1.01308e+08 0.00511056 2.16654e+07 1.39432e+07 2.19412e+07 256 2.20811e+07 1.55288e+07 0.00434961 2.1882e+07 49.7736 0.00542323 0.991901 0 50.3162 GTEX-1F7RK-1526-SM-7P8T6 1 B1 6 pieces; squamous epithelium is largely sloughed, ? portion of muscularis 6.1 Esophagus Esophagus - Mucosa 0006920 1401 959 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.90237 307807 0.964746 0.947941 0.803744 24240 1 76 0.00433706 132 0 7.17126e+07 0.0350805 1.05984e+06 7.56509e+07 1.23404e+07 24261 3.40081e+07 0 0.161002 0.947941 0.761901 7.17126e+07 0.0108982 1.50821e+07 1.05654e+07 1.49374e+07 162 1.6614e+07 8.48379e+06 0.00745992 1.66844e+07 50.1057 0.0140096 0.993512 0 49.7589 GTEX-1F7RK-1726-SM-7MXUV 1 B1 1 piece; adenohypophysis 7.2 Pituitary Pituitary 0000007 1425 935 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977301 244377 0.960356 0.986795 0.788308 25382 1 76 0.00295852 202 0 8.32893e+07 0.0393625 1.73503e+06 8.44039e+07 1.424e+07 25419 4.11696e+07 0 0.172048 0.986795 0.777898 8.32893e+07 0.00412855 1.71107e+07 1.45227e+07 1.71679e+07 225 1.74847e+07 1.31013e+07 0.00353791 1.74924e+07 50.0109 0.0205563 0.996289 0 50.0835 GTEX-1F7RK-1826-SM-7RHI4 1 B1 1 piece 6 Brain Brain - Cortex 0001870 1430 930 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992298 169747 0.965503 0.994351 0.834114 23464 1 76 0.00226437 376 0 8.88285e+07 0.0342142 5.28546e+06 8.93332e+07 8.27711e+06 23483 4.42177e+07 0 0.131389 0.994351 0.829402 8.88285e+07 0.00397117 1.95776e+07 8.84058e+06 1.98867e+07 338 1.97735e+07 9.75355e+06 0.00311601 1.98527e+07 50.0999 0.0591657 0.996404 0 50.3916 GTEX-1F88E-0005-SM-A8N7N C1 7.9 Blood Whole Blood 0013756 1035 BP-56201 RNA isolation_PAXgene Blood RNA (Manual) 08/25/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.958065 2.6155e+06 0.894516 0.960868 0.661903 19741 1 76 0.0110933 100 0 8.1806e+07 0.104436 199829 8.51377e+07 1.58701e+07 19750 4.06071e+07 0 0.232613 0.960868 0.636002 8.1806e+07 0.0124064 1.69663e+07 1.8863e+08 1.75191e+07 114 1.75074e+07 1.61715e+07 0.0117479 1.72958e+07 49.696 0.00234713 0.963671 0 50.8015 GTEX-1F88E-0008-SM-EAZCR C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1106 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992751 532951 0.976499 0.993756 0.838827 22081 1 76 0.00178112 292 0 1.08616e+08 0.0231454 607024 1.09298e+08 8.17087e+06 22110 5.41356e+07 0 0.137672 0.993756 0.83359 1.08616e+08 0.00270095 2.42946e+07 1.38504e+07 2.43876e+07 274 2.4391e+07 2.74467e+07 0.00224057 2.4399e+07 50.0082 0.00555382 0.994761 0 50.0955 GTEX-1F88E-0011-R6a-SM-CKZNW C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1047 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991749 882426 0.952634 0.993801 0.82505 22476 1 76 0.00214101 368 0 1.00951e+08 0.0471693 1.48545e+07 1.01581e+08 9.6083e+06 22488 5.02887e+07 0 0.127584 0.993801 0.819935 1.00951e+08 0.00315039 2.12788e+07 4.66644e+07 2.23163e+07 336 2.21313e+07 5.05045e+06 0.00264466 2.16194e+07 49.415 0.146234 0.995853 0 51.1899 GTEX-1F88E-0011-R8a-SM-CJI2H C1, A1 7.7 Brain Brain - Hypothalamus 0001898 1047 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992464 1.09619e+06 0.957103 0.994021 0.824236 23903 1 76 0.00214799 371 0 9.15788e+07 0.0425778 6.47191e+06 9.21296e+07 5.93556e+06 23925 4.55862e+07 0 0.132868 0.994021 0.819307 9.15788e+07 0.00266591 1.9735e+07 2.70174e+07 2.03513e+07 351 2.03417e+07 9.41601e+06 0.00240654 1.98781e+07 49.4236 0.0702479 0.995578 0 50.7687 GTEX-1F88E-0526-SM-7SB8J 0 C1 2 pieces, ~5-10% fascia/vascular elements; rep. delineated 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 1106 1075 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986168 282789 0.960511 0.98932 0.57821 24481 1 76 0.00306073 121 0 7.45401e+07 0.0392154 201509 7.53448e+07 8.56021e+06 24549 3.7002e+07 0 0.382301 0.98932 0.572035 7.45401e+07 0.00476261 1.62286e+07 9.80317e+06 1.6445e+07 130 1.65209e+07 8.68752e+06 0.00390896 1.63821e+07 49.7891 0.00267449 0.992473 0 50.3311 GTEX-1F88E-0626-SM-7PC3C 0 C1 2 pieces, ~1.3mm nubbin of adherent fat, delineated 6.2 Nerve Nerve - Tibial 0001323 1107 1075 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.982968 416787 0.96378 0.987637 0.699085 25100 1 76 0.00346152 187 0 9.44449e+07 0.0359496 362419 9.56271e+07 1.49182e+07 25146 4.67908e+07 0 0.264695 0.987637 0.690443 9.44449e+07 0.00545206 2.05878e+07 1.0118e+07 2.07972e+07 190 2.10246e+07 1.3649e+07 0.00445209 2.07869e+07 49.7157 0.00378992 0.992307 0 50.2531 GTEX-1F88E-1626-SM-7SB8Z 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~25 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1123 1065 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989244 219884 0.968538 0.991592 0.614519 22801 1 76 0.0029317 125 0 5.30168e+07 0.0312602 321242 5.34664e+07 5.88286e+06 22845 2.63487e+07 0 0.354019 0.991592 0.609352 5.30168e+07 0.00454165 1.17013e+07 7.84568e+06 1.18035e+07 119 1.18337e+07 6.82226e+06 0.00373477 1.17974e+07 49.9232 0.0060083 0.993939 0 50.2176 GTEX-1F88E-1826-SM-9MQLV 0 C1 2 pieces, ~15-20% interstitial fat 6.7 Muscle Muscle - Skeletal 0011907 1126 1063 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985075 321705 0.974844 0.987332 0.819628 21635 1 76 0.00560181 146 0 6.9839e+07 0.0249078 1.28737e+06 7.07351e+07 8.64305e+06 21653 3.47495e+07 0 0.155216 0.987332 0.809245 6.9839e+07 0.00718889 1.52394e+07 7.53467e+06 1.55375e+07 153 1.55387e+07 1.17158e+07 0.00639354 1.53793e+07 49.7423 0.0181998 0.989589 0 50.4842 GTEX-1F88E-2026-SM-7MXVP 1 C1 2 pieces, post menopausal atrophy 6.1 Ovary Ovary 0000992 1129 1061 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.973468 140507 0.962393 0.983725 0.739919 22544 1 76 0.00297605 136 0 6.12798e+07 0.0374047 467253 6.22936e+07 9.81083e+06 22575 3.02415e+07 0 0.222474 0.983725 0.727877 6.12798e+07 0.00435176 1.31675e+07 1.14153e+07 1.32469e+07 124 1.34739e+07 1.16887e+07 0.00365673 1.35414e+07 50.1251 0.00750082 0.993982 0 50.1503 GTEX-1F88E-2126-SM-DK2JJ 1 C1 2 pieces, mainly myometrium; 2mm focus of moderately autolyzed endometrium with trace basalis glands Uterus Uterus 0000995 1131 1060 BP-58049 DNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1F88E-2126-SM-DLL3I 1 C1 2 pieces, mainly myometrium; 2mm focus of moderately autolyzed endometrium with trace basalis glands Uterus Uterus 0000995 1131 1060 BP-58049 DNA Extraction from Paxgene-derived Lysate Plate Based 11/13/2014 LCSET-10443 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1F88E-2826-SM-7RHHE 1 C1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 1151 1044 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992736 337635 0.966893 0.994699 0.854495 22469 1 76 0.00257622 368 0 8.48437e+07 0.0328086 9.54947e+06 8.52959e+07 8.06258e+06 22485 4.22492e+07 0 0.112398 0.994699 0.849965 8.48437e+07 0.00401363 1.86219e+07 2.04443e+07 1.9098e+07 341 1.90003e+07 6.51266e+06 0.00329351 1.88493e+07 49.8005 0.111957 0.996662 0 50.6311 GTEX-1F88E-2926-SM-7MXVQ 1 C1 1 piece, mainly adenohypophysis; ~3x3mm focus of neurohypophysis, delineated 6.3 Pituitary Pituitary 0000007 1152 1043 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757,LCSET-7087 04/25/2015 TruSeq.v1 RNASEQ 0.987481 361171 0.953072 0.991098 0.722027 26418 1 76 0.0026966 277 0 1.20392e+08 0.046644 1.53418e+06 1.21474e+08 1.3403e+07 26483 5.98401e+07 0 0.231045 0.991098 0.7156 1.20392e+08 0.00336956 2.56866e+07 2.0619e+07 2.57809e+07 276 2.59672e+07 1.77955e+07 0.00303185 2.58989e+07 49.9341 0.0126298 0.994715 0 50.0916 GTEX-1F88F-0003-SM-7J3AI B1 Blood Whole Blood 0013756 806 BP-56198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/25/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1F88F-0003-SM-7MA6U B1 Blood Whole Blood 0013756 806 BP-56198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/25/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1F88F-0005-SM-A9SK2 B1 8.8 Blood Whole Blood 0013756 806 BP-56201 RNA isolation_PAXgene Blood RNA (Manual) 08/25/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.985926 1.25541e+06 0.941244 0.987701 0.716844 21091 1 76 0.00697996 114 0 7.50078e+07 0.0581881 139209 7.59418e+07 1.44742e+07 21115 3.72866e+07 0 0.2244 0.987701 0.708028 7.50078e+07 0.00843775 1.64051e+07 7.07738e+07 1.65198e+07 118 1.65908e+07 1.41079e+07 0.00770754 1.64971e+07 49.8584 0.0018331 0.989476 0 50.1741 GTEX-1F88F-0008-SM-EAZCT B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 908 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993317 355165 0.984386 0.994372 0.869638 19875 1 76 0.00171367 231 0 9.03038e+07 0.0152866 157712 9.08149e+07 6.83808e+06 19893 4.5017e+07 0 0.114748 0.994372 0.864743 9.03038e+07 0.00276849 2.04324e+07 7.7561e+06 2.05594e+07 214 2.05918e+07 2.47023e+07 0.00224052 2.04932e+07 49.88 0.00173663 0.995427 0 50.1549 GTEX-1F88F-0011-R7a-SM-9QEI3 B1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 800 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 EXCLUDE 0.989766 223861 0.975993 0.993356 0.85149 17087 1 76 0.00243596 367 0 7.71654e+07 0.0239765 1.26587e+07 7.76815e+07 3.67629e+06 17089 3.83834e+07 0 0.124503 0.993356 0.845833 7.71654e+07 0.004518 1.63866e+07 3.59349e+07 1.70883e+07 332 1.66985e+07 2.00814e+06 0.00347322 1.69307e+07 50.3452 0.162956 0.996947 0 51.0482 GTEX-1F88F-0011-R9b-SM-9WG7L B1, A1 7.1 Brain Brain - Spinal cord (cervical c-1) 0006469 800 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991625 289938 0.961816 0.993946 0.816811 22787 1 76 0.00254089 231 0 7.83715e+07 0.0378638 2.63227e+06 7.88488e+07 5.66415e+06 22809 3.90142e+07 0 0.145005 0.993946 0.811866 7.83715e+07 0.0037863 1.73097e+07 9.31508e+06 1.76602e+07 225 1.7531e+07 1.07503e+07 0.00316214 1.76107e+07 50.1135 0.0333837 0.996268 0 50.5011 GTEX-1F88F-0126-SM-9WYSZ 1 B1 6 pieces; well trimmed; 5% dermal fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 819 1354 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993089 180915 0.968246 0.994486 0.730917 23933 1 76 0.00263674 168 0 8.34789e+07 0.0315843 458592 8.39417e+07 5.68153e+06 23980 4.15874e+07 0 0.237329 0.994486 0.726887 8.34789e+07 0.00455282 1.83065e+07 8.67682e+06 1.84884e+07 188 1.84911e+07 1.1426e+07 0.00359344 1.84164e+07 49.8988 0.00546322 0.995884 0 50.2472 GTEX-1F88F-0226-SM-9WYT1 1 B1 6 pieces; minimal plaque 8.1 Blood Vessel Artery - Aorta 0001496 829 1344 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992313 174776 0.975993 0.99371 0.769297 20781 1 76 0.00273459 112 0 5.47885e+07 0.023575 99573 5.51353e+07 3.98902e+06 20797 2.72767e+07 0 0.206697 0.99371 0.764458 5.47885e+07 0.00438695 1.18488e+07 4.40928e+06 1.19222e+07 119 1.1958e+07 9.47101e+06 0.00355961 1.18874e+07 49.852 0.00180598 0.995108 0 50.1543 GTEX-1F88F-0326-SM-9KNV3 1 B1 2 pieces; 20% internal fibrous content; no fat 6.1 Heart Heart - Atrial Appendage 0006631 831 1342 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992775 214264 0.975176 0.993888 0.775348 23754 1 76 0.00286855 268 0 1.079e+08 0.0245861 3.6499e+06 1.08563e+08 1.28597e+07 23785 5.37903e+07 0 0.199828 0.993888 0.770609 1.079e+08 0.00351617 2.35434e+07 1.26415e+07 2.3941e+07 298 2.39592e+07 1.35499e+07 0.003192 2.36323e+07 49.6566 0.03362 0.995001 0 50.4187 GTEX-1F88F-0726-SM-7P8R7 2 B1 2 pieces; 1 mm adenomatoid nodule in 1; 50% fat in other 6 Thyroid Thyroid 0002046 841 1332 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.986654 439160 0.969487 0.989266 0.742521 25688 1 76 0.00320523 275 0 1.08578e+08 0.0302273 1.3753e+06 1.09756e+08 1.56848e+07 25740 5.39975e+07 0 0.226966 0.989266 0.734551 1.08578e+08 0.00451093 2.38015e+07 1.30996e+07 2.41944e+07 289 2.43086e+07 1.37689e+07 0.00385636 2.39543e+07 49.633 0.0125305 0.991877 0 50.4093 GTEX-1F88F-0926-SM-7RHH8 1 B1 2 pieces; extensive alveolar hemorrhage; areas of interstitial fibrosis; calcific focus in a bronchial wall; 0.1 mm bone marroe embolus [labeled] 7 Lung Lung 0008952 848 1325 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99079 188396 0.973476 0.992999 0.729162 24275 1 76 0.00281285 272 0 1.05567e+08 0.0261768 529024 1.06311e+08 1.05762e+07 24321 5.25219e+07 0 0.244314 0.992999 0.724058 1.05567e+08 0.00403552 2.32869e+07 1.07226e+07 2.34497e+07 295 2.34932e+07 1.47753e+07 0.00342282 2.34669e+07 49.9719 0.00497618 0.995208 0 50.1741 GTEX-1F88F-1126-SM-7MKHL 1 B1 6 pieces; moderate vascular congestion; 2 mm fatty carry-over on surface [labeled] 7.2 Esophagus Esophagus - Mucosa 0006920 856 1317 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.97813 364141 0.977017 0.986636 0.800906 22088 1 76 0.00392797 158 0 8.04633e+07 0.0227213 1.01295e+06 8.15532e+07 1.1859e+07 22102 3.97471e+07 0 0.176112 0.986636 0.790202 8.04633e+07 0.00579617 1.79267e+07 1.08193e+07 1.82208e+07 181 1.85511e+07 1.25749e+07 0.00485402 1.82743e+07 49.6241 0.0124207 0.995141 0 50.4067 GTEX-1F88F-1526-SM-9JGG1 2 B1 2 pieces; 70% external fat content 5.9 Adrenal Gland Adrenal Gland 0002369 870 1303 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.990927 70485 0.973929 0.992681 0.795216 20232 1 76 0.00468729 97 0 4.37064e+07 0.0258946 2.4035e+06 4.40287e+07 5.44722e+06 20244 2.17668e+07 0 0.178713 0.992681 0.789395 4.37064e+07 0.00450649 9.32983e+06 4.74065e+06 9.86909e+06 107 9.87070e+06 4.39418e+06 0.00459705 9.39721e+06 48.7713 0.0545894 0.994435 0 51.4044 GTEX-1F88F-1626-SM-7PBZB 1 B1 6 pieces; hemorrhagic foci in 2 pieces up to 1 mm [labeled]; extraneous bone fragments 0.2 mm [labeled] 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 875 1298 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986952 173602 0.966038 0.990677 0.78062 23748 1 76 0.00329969 268 0 8.96345e+07 0.0337953 2.95058e+06 9.0478e+07 1.23316e+07 23780 4.4521e+07 0 0.185418 0.990677 0.773343 8.96345e+07 0.00551847 1.9488e+07 1.08073e+07 1.98224e+07 261 1.98486e+07 9.05816e+06 0.0044049 1.97677e+07 49.8978 0.032611 0.994402 0 50.4253 GTEX-1F88F-2126-SM-9KNUK 1 B1 2 pieces; 1 piece is atrophic ovary with 60% vascular stroma; other piece is all fibrofatty and vascular tissue; limited value 5.8 Ovary Ovary 0000992 891 1282 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992648 135486 0.966061 0.993851 0.731799 24853 1 76 0.00283985 206 0 8.87142e+07 0.033703 1.16133e+06 8.9263e+07 1.02546e+07 24890 4.41863e+07 0 0.234261 0.993851 0.7273 8.87142e+07 0.00388754 1.9329e+07 9.50081e+06 1.95414e+07 221 1.94893e+07 1.08348e+07 0.00336306 1.94871e+07 49.9971 0.0130102 0.995054 0 50.2732 GTEX-1F88F-2526-SM-7PC2R 1 B1 2 pieces; 10 & 30% internal fat content 6 Muscle Muscle - Skeletal 0011907 905 1268 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.990211 497239 0.983243 0.992936 0.89247 19752 1 76 0.00330558 201 0 9.25313e+07 0.0165781 1.22196e+06 9.31895e+07 1.46128e+07 19762 4.59866e+07 0 0.0907736 0.992936 0.886166 9.25313e+07 0.00450435 2.06219e+07 1.04374e+07 2.08304e+07 234 2.09557e+07 1.93487e+07 0.00390332 2.07307e+07 49.7301 0.0131126 0.995661 0 50.2514 GTEX-1F88F-2626-SM-9WG5K 1 B1 2 pieces; minimal fibrous content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 906 1267 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991806 235371 0.973926 0.994016 0.801075 24259 1 76 0.00273538 277 0 1.05189e+08 0.0257688 1.18129e+06 1.05822e+08 7.90247e+06 24297 5.23668e+07 0 0.17285 0.994016 0.796281 1.05189e+08 0.00358 2.30094e+07 1.18118e+07 2.32903e+07 318 2.33166e+07 1.51547e+07 0.00315675 2.31991e+07 49.8736 0.0111629 0.996225 0 50.3034 GTEX-1F88F-2726-SM-7PBZZ 1 B1 6 pieces; 10% dermal fat; prominent artery & hair follicle in 1 piece 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 909 1264 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.98857 163247 0.970557 0.992065 0.769077 24697 1 76 0.00290361 180 0 8.09379e+07 0.0291912 494250 8.15853e+07 1.06997e+07 24728 4.02334e+07 0 0.20148 0.992065 0.762974 8.09379e+07 0.00494495 1.75741e+07 8.33312e+06 1.77252e+07 179 1.78067e+07 1.3119e+07 0.00392069 1.77601e+07 49.9345 0.00605808 0.995559 0 50.214 GTEX-1F88F-2826-SM-7SB8W 1 B1 2 pieces; 20 & 40% external fat content 5.8 Nerve Nerve - Tibial 0001323 914 1259 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98938 288473 0.950938 0.991894 0.60551 26235 1 76 0.00305221 142 0 8.20023e+07 0.0488075 300002 8.26724e+07 9.77042e+06 26304 4.07656e+07 0 0.345428 0.991894 0.600602 8.20023e+07 0.00439274 1.7697e+07 1.05821e+07 1.78563e+07 147 1.79146e+07 9.44917e+06 0.00372077 1.78359e+07 49.8899 0.0036288 0.994408 0 50.2241 GTEX-1F88F-2926-SM-7PBZA 1 B1 2 pieces; minimal plaque; focus of medial calcium; well trimmed 7.5 Blood Vessel Artery - Tibial 0007610 914 1259 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989674 124873 0.974087 0.99272 0.811307 22406 1 76 0.00291668 209 0 8.75398e+07 0.0255313 421743 8.81818e+07 1.17476e+07 22433 4.35278e+07 0 0.16278 0.99272 0.8054 8.75398e+07 0.00454683 1.87162e+07 6.97024e+06 1.88808e+07 227 1.89383e+07 1.56425e+07 0.00372926 1.89049e+07 49.956 0.00478265 0.995766 0 50.2189 GTEX-1F88F-3226-SM-9JGH1 1 B1 1 piece; 80% anterior lobe; 20% posterior [labeled] 5.8 Pituitary Pituitary 0000007 948 1225 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993036 443008 0.955853 0.994449 0.722802 26288 1 76 0.00224391 266 0 1.01359e+08 0.0439378 717157 1.01925e+08 5.1842e+06 26347 5.04848e+07 0 0.233051 0.994449 0.71879 1.01359e+08 0.00343336 2.1332e+07 1.12456e+07 2.15339e+07 264 2.15096e+07 1.25669e+07 0.00283779 2.14868e+07 49.9735 0.00703614 0.995863 0 50.2355 GTEX-1FIGZ-0001-SM-EAZCM B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -135 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.991428 904350 0.963989 0.992473 0.794027 22137 1 76 0.00220951 281 0 1.0613e+08 0.0354208 581041 1.06935e+08 7.61765e+06 22175 5.28613e+07 0 0.169962 0.992473 0.78805 1.0613e+08 0.00312172 2.35478e+07 1.97744e+07 2.36641e+07 266 2.37216e+07 2.32767e+07 0.00266513 2.3597e+07 49.8683 0.00543358 0.993517 0 50.1232 GTEX-1FIGZ-0003-SM-7J3AX B1 Blood Whole Blood 0013756 -135 BP-56256 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/28/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1FIGZ-0003-SM-7MA7A B1 Blood Whole Blood 0013756 -135 BP-56256 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/28/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1FIGZ-0005-SM-A8N7O B1 7.8 Blood Whole Blood 0013756 -135 BP-56267 RNA isolation_PAXgene Blood RNA (Manual) 08/29/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983936 1.50317e+06 0.930633 0.986744 0.762409 21076 1 76 0.0106891 132 0 8.57701e+07 0.0689847 335951 8.69224e+07 1.44037e+07 21097 4.26078e+07 0 0.168223 0.986744 0.752303 8.57701e+07 0.0116987 1.79997e+07 5.10618e+07 1.81857e+07 148 1.82499e+07 1.47532e+07 0.0111924 1.82124e+07 49.9485 0.00386496 0.989553 0 50.257 GTEX-1FIGZ-0008-SM-EAZCS B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 370 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992148 396877 0.977113 0.993202 0.835632 21767 1 76 0.00177685 288 0 1.03246e+08 0.0225398 522936 1.03953e+08 7.78928e+06 21794 5.14608e+07 0 0.141481 0.993202 0.829951 1.03246e+08 0.00279869 2.29475e+07 1.14324e+07 2.30978e+07 264 2.30728e+07 2.544e+07 0.00228723 2.30812e+07 50.0091 0.00503052 0.994256 0 50.1633 GTEX-1FIGZ-0126-SM-7MKGZ 0 B1 2 pieces; 1 piece includes capsule (target is 5mm below capsule) 5.8 Spleen Spleen 0002106 47 848 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.98018 309733 0.964485 0.987146 0.786552 24878 1 76 0.00410901 155 0 7.6625e+07 0.0352726 1.20642e+06 7.76228e+07 1.19309e+07 24901 3.79072e+07 0 0.177932 0.987146 0.776442 7.6625e+07 0.00532313 1.65865e+07 9.85229e+06 1.68909e+07 166 1.70989e+07 1.18064e+07 0.00471179 1.68896e+07 49.6921 0.0155422 0.994112 0 50.4546 GTEX-1FIGZ-0226-SM-7P8QR 0 B1 2 pieces; 1 piece includes small attachment of fat/vessels 7.1 Thyroid Thyroid 0002046 180 715 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987029 414966 0.970862 0.989194 0.776404 25153 1 76 0.00284069 277 0 1.20046e+08 0.0288379 449811 1.21358e+08 1.57976e+07 25198 5.97612e+07 0 0.194458 0.989194 0.768014 1.20046e+08 0.00416302 2.6365e+07 1.20185e+07 2.66011e+07 293 2.6692e+07 2.02426e+07 0.00350041 2.65123e+07 49.8312 0.00370649 0.99136 0 50.2229 GTEX-1FIGZ-0326-SM-7RHGT 0 B1 2 pieces; includes pleura (target is 1 cm below pleura), emphysematous change 6.5 Lung Lung 0008952 184 711 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990855 230286 0.9673 0.993343 0.805274 25808 1 76 0.00240519 276 0 1.02961e+08 0.0322149 335975 1.03651e+08 9.44948e+06 25841 5.12208e+07 0 0.162026 0.993343 0.799914 1.02961e+08 0.00422936 2.23935e+07 8.80832e+06 2.26035e+07 303 2.25626e+07 1.77359e+07 0.00331499 2.26778e+07 50.1273 0.00324142 0.995832 0 50.2333 GTEX-1FIGZ-1626-SM-7SB8L 0 B1 2 pieces; 1 piece is ~90% fat/10% fibrous, 2nd is ~50% fat/50% fibrous and vessels 7 Adipose Tissue Adipose - Subcutaneous 0002190 347 548 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990275 213474 0.968304 0.992888 0.737511 22915 1 76 0.00263807 136 0 6.92292e+07 0.0313938 406528 6.97251e+07 7.5543e+06 22951 3.44507e+07 0 0.230793 0.992888 0.732265 6.92292e+07 0.00419952 1.51746e+07 1.11951e+07 1.53293e+07 144 1.53733e+07 1.07314e+07 0.00341674 1.5304e+07 49.8871 0.00583044 0.9955 0 50.2535 GTEX-1FIGZ-1726-SM-9MQKS 0 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 381 514 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987985 210984 0.984852 0.989677 0.882269 18806 1 76 0.00551188 136 0 7.20727e+07 0.0149237 883991 7.28245e+07 8.54085e+06 18810 3.59089e+07 0 0.102583 0.989677 0.873161 7.20727e+07 0.0066813 1.5548e+07 1.04722e+07 1.59491e+07 161 1.59183e+07 1.39294e+07 0.00609559 1.56732e+07 49.6121 0.0121387 0.991368 0 50.6367 GTEX-1FIGZ-1926-SM-9KNUL 0 B1 2 pieces; 1 piece includes ~70% attached fat 8.4 Blood Vessel Artery - Tibial 0007610 390 505 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993871 276602 0.978999 0.99494 0.849643 22383 1 76 0.00249089 287 0 9.91918e+07 0.020511 431304 9.96962e+07 1.20046e+07 22404 4.94352e+07 0 0.129355 0.99494 0.845344 9.91918e+07 0.00315153 2.15389e+07 9.36956e+06 2.17384e+07 276 2.17553e+07 2.07e+07 0.00282086 2.16249e+07 49.8497 0.00432618 0.99601 0 50.2305 GTEX-1GF9U-0001-SM-EAZCO B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -57 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.990263 2.70047e+06 0.913025 0.991493 0.758601 22410 1 76 0.00208931 283 0 1.22242e+08 0.0857612 714371 1.23291e+08 9.32242e+06 22453 6.0872e+07 0 0.154424 0.991493 0.752147 1.22242e+08 0.00319948 2.55241e+07 9.36125e+07 2.59876e+07 275 2.60322e+07 2.67757e+07 0.00264371 2.56455e+07 49.6258 0.00579419 0.992723 0 50.4499 GTEX-1GF9U-0004-SM-7J3A8 B1 Blood Whole Blood 0013756 -57 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GF9U-0004-SM-7MA6K B1 Blood Whole Blood 0013756 -57 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GF9U-0005-SM-A9SK1 B1 8.5 Blood Whole Blood 0013756 -57 BP-56323 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.977861 679920 0.96646 0.97943 0.808621 18811 1 76 0.00661456 109 0 8.26092e+07 0.032924 325489 8.43442e+07 1.54093e+07 18820 4.1112e+07 0 0.157839 0.97943 0.791987 8.26092e+07 0.00824397 1.8584e+07 7.81636e+07 1.8754e+07 131 1.87716e+07 1.8714e+07 0.00742796 1.87022e+07 49.9075 0.00385906 0.980998 0 50.2275 GTEX-1GF9U-0008-SM-EAZCV B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 736 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992836 633459 0.974552 0.993945 0.860047 20123 1 76 0.00165285 220 0 9.45290e+07 0.0251451 248072 9.51049e+07 6.90569e+06 20139 4.71163e+07 0 0.114504 0.993945 0.85484 9.45290e+07 0.00277192 2.11643e+07 1.7233e+07 2.12787e+07 230 2.13056e+07 2.54677e+07 0.00221176 2.12433e+07 49.9268 0.0026084 0.995053 0 50.1347 GTEX-1GF9U-0126-SM-AHZ4G 0 B1 2 pieces 5.7 Spleen Spleen 0002106 477 1083 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.986518 251150 0.959672 0.988359 0.759418 24049 1 76 0.00720718 124 0 6.63897e+07 0.0396598 263119 6.71717e+07 1.2944e+07 24077 3.29971e+07 0 0.200255 0.988359 0.750577 6.63897e+07 0.0091563 1.44826e+07 9.55372e+06 1.46083e+07 132 1.45888e+07 9.39496e+06 0.00817993 1.46174e+07 50.0489 0.00391711 0.990199 0 50.216 GTEX-1GF9U-0226-SM-7P8TY 1 B1 2 pieces; multinodular goiter 7.1 Thyroid Thyroid 0002046 484 1076 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.934336 319833 0.959335 0.964063 0.724655 25557 1 76 0.00460274 131 0 7.82941e+07 0.0404287 382300 8.12126e+07 1.27923e+07 25597 3.78118e+07 0 0.234681 0.964063 0.698613 7.82941e+07 0.00849144 1.64346e+07 9.19925e+06 1.65696e+07 147 1.77958e+07 1.0749e+07 0.00648713 1.74845e+07 49.5589 0.0047074 0.993791 0 50.2046 GTEX-1GF9U-0326-SM-7SB91 0 B1 6 pieces; several include residual attached fat 7.1 Blood Vessel Artery - Aorta 0001496 487 1073 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.988986 293273 0.965021 0.991604 0.723581 24436 1 76 0.00280033 164 0 8.55771e+07 0.0346996 244337 8.63017e+07 1.02232e+07 24481 4.2551e+07 0 0.24144 0.991604 0.717506 8.55771e+07 0.00428418 1.84819e+07 8.09058e+06 1.86981e+07 179 1.87368e+07 1.3011e+07 0.0035403 1.86569e+07 49.8932 0.0028312 0.994222 0 50.2908 GTEX-1GF9U-0426-SM-7RHHA 0 B1 2 pieces 7.6 Heart Heart - Left Ventricle 0006566 494 1066 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992111 277777 0.979793 0.994316 0.836701 22879 1 76 0.00237811 269 0 1.15591e+08 0.020013 2.9563e+06 1.16252e+08 1.07297e+07 22902 5.75658e+07 0 0.143092 0.994316 0.831945 1.15591e+08 0.00381662 2.54024e+07 1.98172e+07 2.55792e+07 321 2.55562e+07 1.65422e+07 0.00309577 2.56329e+07 50.0748 0.02543 0.996521 0 50.1733 GTEX-1GF9U-0526-SM-7P8SK 0 B1 2 pieces; includes minimal fat 6.2 Heart Heart - Atrial Appendage 0006631 499 1061 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.935839 277247 0.980558 0.965895 0.87524 22035 1 76 0.00398746 197 0 8.51184e+07 0.0192533 2.11167e+06 8.81238e+07 1.35296e+07 22044 4.1133e+07 0 0.105318 0.965895 0.84539 8.51184e+07 0.00909578 1.85909e+07 1.38624e+07 1.80255e+07 237 1.92617e+07 1.32848e+07 0.00646214 1.97246e+07 50.5938 0.0239626 0.995951 0 49.228 GTEX-1GF9U-0826-SM-7MXTZ 1 B1 6 pieces (fragmented); focal inflammatory cells in epithelial layer 6.3 Esophagus Esophagus - Mucosa 0006920 521 1039 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976827 123900 0.977249 0.986402 0.845261 21819 1 76 0.00304281 139 0 7.21144e+07 0.0224815 288991 7.31084e+07 1.22707e+07 21837 3.565e+07 0 0.131988 0.986402 0.833768 7.21144e+07 0.00417423 1.61544e+07 1.1622e+07 1.6262e+07 155 1.65499e+07 1.51227e+07 0.00360303 1.65406e+07 49.986 0.00395291 0.995977 0 50.166 GTEX-1GF9U-0926-SM-7PC14 1 B1 6 pieces; target muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 521 1039 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988889 191605 0.974745 0.992484 0.811456 23818 1 76 0.00286039 282 0 1.12541e+08 0.0249732 1.15522e+06 1.13393e+08 1.57528e+07 23851 5.59472e+07 0 0.163289 0.992484 0.805357 1.12541e+08 0.00474456 2.41917e+07 1.09052e+07 2.44033e+07 303 2.44938e+07 1.93356e+07 0.00379907 2.4465e+07 49.9706 0.0101877 0.996079 0 50.2177 GTEX-1GF9U-1026-SM-ARZNL 1 B1 6 pieces; target muscularis with residual attached mucosa in one piece, and attached fibrovascular and fatty tissue with suture material 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 527 1033 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988396 745519 0.971952 0.990453 0.775197 21810 1 76 0.00245273 126 0 6.0503e+07 0.0277731 462047 6.10861e+07 2.84806e+06 21832 3.00069e+07 0 0.196755 0.990453 0.767797 6.0503e+07 0.00376029 1.30852e+07 5.7583e+06 1.32131e+07 133 1.34913e+07 1.02611e+07 0.00310515 1.29186e+07 48.9158 0.00756386 0.99251 0 50.243 GTEX-1GF9U-1126-SM-AHZ4H 2 B1 6 pieces; 2 are mucosa only, 4 include variable amounts of muscularis 6.7 Stomach Stomach 0000945 531 1029 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.988392 165463 0.981544 0.990034 0.853526 21742 1 76 0.00183954 276 0 6.29481e+07 0.0181847 736828 6.35817e+07 2.34842e+06 21754 3.13499e+07 0 0.128018 0.990034 0.84502 6.29481e+07 0.00267185 1.45117e+07 5.80314e+07 1.47734e+07 189 1.47959e+07 1.6427e+07 0.002255 1.45916e+07 49.6525 0.0115887 0.991677 0 50.4468 GTEX-1GF9U-1226-SM-ARL9I 0 B1 2 pieces; adipose tissue, central defect in 1 piece 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 534 1026 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.991588 648864 0.970908 0.991821 0.798902 22891 1 76 0.00188292 137 0 6.41883e+07 0.0288523 804883 6.47176e+07 4.5492e+06 22919 3.18961e+07 0 0.172006 0.991821 0.792368 6.41883e+07 0.00240313 1.4063e+07 9.59708e+06 1.41007e+07 159 1.43846e+07 9.49919e+06 0.00214296 1.37933e+07 48.9507 0.0124368 0.992054 0 50.0669 GTEX-1GF9U-1326-SM-AHZ4I 1 B1 2 pieces; includes about 20-30% internal and external fat, lymphoid aggregate, islets are numerous/well visualized 8 Pancreas Pancreas 0001150 538 1022 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 EXCLUDE 0.989082 328334 0.959566 0.990758 0.70376 25125 1 76 0.00528389 138 0 8.19141e+07 0.0398355 308547 8.26781e+07 9.76215e+06 25172 4.07498e+07 0 0.255806 0.990758 0.697256 8.19141e+07 0.00672557 1.79322e+07 9.81768e+06 1.80526e+07 150 1.80837e+07 1.1979e+07 0.00600351 1.80278e+07 49.9226 0.00373191 0.992435 0 50.1673 GTEX-1GF9U-1526-SM-7MXUW 1 B1 6 pieces; full thickness sections of colon 6.4 Colon Colon - Transverse 0001157 553 1007 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.97506 151791 0.972981 0.985632 0.7963 23984 1 76 0.00312573 204 0 7.88481e+07 0.026609 1.35245e+06 7.99975e+07 1.27848e+07 24012 3.8927e+07 0 0.176681 0.985632 0.784858 7.88481e+07 0.00428084 1.71195e+07 1.34256e+07 1.72319e+07 218 1.75251e+07 1.06966e+07 0.00369709 1.75737e+07 50.0693 0.0169061 0.996203 0 50.1636 GTEX-1GF9U-1726-SM-7MGY5 0 B1 2 pieces; mostly fat with <10 and 25% fibrocollagenous tissue with scattered duct and lobules 6.4 Breast Breast - Mammary Tissue 0008367 568 992 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991751 185133 0.974218 0.993579 0.81992 22442 1 76 0.00261838 160 0 7.09388e+07 0.025555 740199 7.13973e+07 5.44934e+06 22466 3.53303e+07 0 0.154298 0.993579 0.814656 7.09388e+07 0.00333327 1.55982e+07 7.19498e+06 1.57255e+07 177 1.57334e+07 1.1294e+07 0.00297517 1.57108e+07 49.964 0.0103673 0.995407 0 50.2032 GTEX-1GF9U-1826-SM-7P8T7 0 B1 6 pieces; myometrium only in this section 6.8 Uterus Uterus 0000995 572 988 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.932008 340923 0.968836 0.963088 0.766622 24131 1 76 0.00459708 141 0 7.90138e+07 0.0309171 292916 8.20422e+07 1.33715e+07 24159 3.8103e+07 0 0.202215 0.963088 0.738324 7.90138e+07 0.00879647 1.66002e+07 9.92825e+06 1.68226e+07 150 1.80774e+07 1.27124e+07 0.00662902 1.77703e+07 49.5716 0.00357031 0.994168 0 50.3327 GTEX-1GF9U-1926-SM-7P8TZ 1 B1 6 pieces; epithelium partially sloughed, ~0.23mm 8.3 Vagina Vagina 0000996 574 986 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.952035 223250 0.969443 0.972984 0.740326 24216 1 76 0.00457652 119 0 6.63171e+07 0.0303067 126873 6.81585e+07 1.00638e+07 24246 3.23453e+07 0 0.229116 0.972984 0.720326 6.63171e+07 0.00719973 1.43621e+07 8.64836e+06 1.45253e+07 121 1.5281e+07 1.12993e+07 0.00585989 1.50134e+07 49.5583 0.00186144 0.993933 0 50.2825 GTEX-1GF9U-2026-SM-7SB92 0 B1 6 pieces; 5 include significant attached fat, up to 70% 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 579 981 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989672 420628 0.961478 0.991987 0.709195 26245 1 76 0.00276804 169 0 9.15636e+07 0.0382614 419193 9.23032e+07 1.03732e+07 26298 4.55546e+07 0 0.252283 0.991987 0.703513 9.15636e+07 0.00414848 1.99833e+07 1.66151e+07 2.02394e+07 190 2.02774e+07 1.37317e+07 0.00345665 2.01549e+07 49.8485 0.00454148 0.994303 0 50.3184 GTEX-1GF9U-2126-SM-7SB7L 0 B1 6 pieces; variable amount of residual attached fat, up to 20%, epidermis measures 38 microns 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 736 824 BP-57655 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987885 133847 0.964901 0.990328 0.688193 24102 1 76 0.00293353 135 0 6.00576e+07 0.034934 406639 6.06442e+07 6.81012e+06 24146 2.98522e+07 0 0.276708 0.990328 0.681537 6.00576e+07 0.00448218 1.30584e+07 7.67276e+06 1.32588e+07 128 1.32636e+07 7.8999e+06 0.00370594 1.31971e+07 49.8744 0.00670533 0.992771 0 50.3807 GTEX-1GF9U-2326-SM-7RHH9 1 B1 2 pieces; includes from 5-10% internal fat 7.2 Muscle Muscle - Skeletal 0011907 739 821 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.993681 181602 0.981339 0.995282 0.864844 21172 1 76 0.00231171 274 0 1.05896e+08 0.0184846 1.89645e+06 1.06398e+08 1.05164e+07 21185 5.27802e+07 0 0.116495 0.995282 0.860763 1.05896e+08 0.0032663 2.33166e+07 1.19121e+07 2.35938e+07 290 2.36743e+07 1.99521e+07 0.00278824 2.33889e+07 49.6968 0.0178241 0.996883 0 50.2956 GTEX-1GF9U-2426-SM-7SB8C 1 B1 4 pieces; nerve with up to 0.7mm attached fat (10-50%) 6.7 Nerve Nerve - Tibial 0001323 741 819 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990177 219874 0.961534 0.992118 0.655171 24483 1 76 0.0028571 135 0 7.19411e+07 0.038233 336859 7.25126e+07 7.62015e+06 24539 3.57788e+07 0 0.306362 0.992118 0.650007 7.19411e+07 0.0042589 1.56864e+07 6.82694e+06 1.58463e+07 144 1.5854e+07 9.28693e+06 0.00355662 1.58128e+07 49.9349 0.00464552 0.994059 0 50.2536 GTEX-1GF9U-2526-SM-7PC3U 1 B1 2 pieces; significant residual fat (70%) 7.2 Blood Vessel Artery - Tibial 0007610 742 818 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987342 409027 0.975512 0.990924 0.807436 23200 1 76 0.00340903 217 0 9.54526e+07 0.0241616 506029 9.63268e+07 1.58203e+07 23227 4.73746e+07 0 0.168076 0.990924 0.800108 9.54526e+07 0.00509919 2.06906e+07 8.5374e+06 2.09301e+07 217 2.10904e+07 1.76725e+07 0.00425106 2.0855e+07 49.7193 0.00525325 0.994506 0 50.2877 GTEX-1GF9U-5001-SM-AN46D B1 Heart Heart - Left Ventricle 0006566 494 ChIP-Seq GTEX-1GF9U-5019-SM-AN42N B1 Muscle Muscle - Skeletal 0011907 739 ChIP-Seq GTEX-1GF9V-0004-SM-7J3AE B1 Blood Whole Blood 0013756 506 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GF9V-0004-SM-7MA6Q B1 Blood Whole Blood 0013756 506 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GF9V-0006-SM-A96RD B1 7.7 Blood Whole Blood 0013756 506 BP-56323 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.972171 282848 0.982911 0.973445 0.815754 17751 1 76 0.00191701 97 0 6.8602e+07 0.015927 216187 7.04735e+07 2.31266e+06 17757 3.41376e+07 0 0.167157 0.973445 0.794091 6.8602e+07 0.00254569 1.6115e+07 1.00426e+08 1.62352e+07 114 1.62792e+07 1.83709e+07 0.00223094 1.61592e+07 49.8151 0.00306764 0.974718 0 50.1858 GTEX-1GF9V-0008-SM-EAZCW B1 9 Skin Cells - Cultured fibroblasts EFO_0002009 658 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.9933 428194 0.982836 0.99428 0.869028 20189 1 76 0.00161492 294 0 9.98681e+07 0.016859 190936 1.00443e+08 7.09494e+06 20209 4.97841e+07 0 0.113807 0.99428 0.864058 9.98681e+07 0.00266305 2.26129e+07 1.01796e+07 2.27108e+07 265 2.27378e+07 2.72826e+07 0.00213847 2.26807e+07 49.9371 0.00190095 0.99526 0 50.108 GTEX-1GF9V-0011-R10b-SM-CKZNP B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 610 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991339 922457 0.946679 0.993448 0.829154 23444 1 76 0.00202403 271 0 8.27194e+07 0.0530674 4.32829e+06 8.32649e+07 8.11772e+06 23460 4.11915e+07 0 0.117525 0.993448 0.823721 8.27194e+07 0.00317234 1.77575e+07 2.33357e+07 1.80961e+07 317 1.80612e+07 9.10696e+06 0.00259696 1.79515e+07 49.8478 0.0519822 0.995557 0 50.4722 GTEX-1GF9V-0011-R1a-SM-CKZNQ B1, A1 5.6 Brain Brain - Hippocampus 0001954 610 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991754 716815 0.957941 0.994006 0.845604 21256 1 76 0.00208089 368 0 8.12303e+07 0.041914 1.43953e+07 8.17201e+07 6.63383e+06 21269 4.04536e+07 0 0.112337 0.994006 0.840536 8.12303e+07 0.00325169 1.75585e+07 3.25262e+07 1.83001e+07 345 1.82444e+07 4.06419e+06 0.00266496 1.77699e+07 49.3412 0.176154 0.996259 0 51.034 GTEX-1GF9V-0011-R5a-SM-9QEI8 B1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 610 BP-60059 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989494 434791 0.963892 0.993 0.831632 22493 1 76 0.0018655 268 0 9.55934e+07 0.0359195 9.18407e+06 9.62672e+07 4.70334e+06 22508 4.75553e+07 0 0.132261 0.993 0.82581 9.55934e+07 0.00408656 2.05754e+07 3.52263e+07 2.09927e+07 327 2.09124e+07 6.47771e+06 0.00297211 2.09141e+07 50.0021 0.0954018 0.996506 0 50.502 GTEX-1GF9V-0011-R6b-SM-CJI2Q B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 610 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993113 763727 0.967899 0.99428 0.836361 23976 1 76 0.00198133 373 0 1.14196e+08 0.031836 9.47254e+06 1.14853e+08 6.99425e+06 23999 5.68885e+07 0 0.131537 0.99428 0.831577 1.14196e+08 0.00245531 2.45452e+07 3.18599e+07 2.52907e+07 366 2.52112e+07 1.12488e+07 0.00221804 2.47336e+07 49.5219 0.082475 0.995447 0 50.748 GTEX-1GF9V-0011-R7a-SM-CJI2R B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 610 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99024 919477 0.968021 0.992479 0.843306 21367 1 76 0.0020428 199 0 7.22465e+07 0.0317808 7.08217e+06 7.2794e+07 4.7017e+06 21378 3.58904e+07 0 0.124715 0.992479 0.836963 7.22465e+07 0.00262768 1.54143e+07 2.7667e+07 1.61591e+07 252 1.6121e+07 5.89464e+06 0.00233458 1.55957e+07 49.172 0.0972906 0.994718 0 51.1795 GTEX-1GF9V-0011-R8b-SM-CE6RB B1, A1 7.7 Brain Brain - Hypothalamus 0001898 610 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990532 933054 0.950185 0.991515 0.803607 25384 1 76 0.00784924 201 0 8.8412e+07 0.0495157 4.31701e+06 8.91686e+07 1.27784e+07 25416 4.40083e+07 0 0.146578 0.991515 0.796789 8.8412e+07 0.00669355 1.91407e+07 2.38428e+07 1.93998e+07 237 1.94224e+07 9.92189e+06 0.00727197 1.9204e+07 49.7174 0.048414 0.992499 0 50.3362 GTEX-1GF9V-0011-R9a-SM-CL53K B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 610 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993277 668481 0.956205 0.994667 0.814705 24124 1 76 0.00253503 390 0 1.01929e+08 0.0433849 2.97528e+06 1.02475e+08 1.21933e+07 24151 5.07568e+07 0 0.1415 0.994667 0.81036 1.01929e+08 0.00391763 2.24633e+07 1.48861e+07 2.28845e+07 363 2.26848e+07 1.40193e+07 0.00322536 2.2809e+07 50.1365 0.029034 0.996057 0 50.4644 GTEX-1GF9V-0126-SM-9WYT2 0 B1 2 pieces,, ~5% interstitial fat, rep delineated 8.7 Muscle Muscle - Skeletal 0011907 674 699 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99455 304559 0.983162 0.995635 0.867987 19623 1 76 0.00211113 201 0 8.92399e+07 0.016564 1.35923e+06 8.96312e+07 5.90745e+06 19638 4.44938e+07 0 0.115175 0.995635 0.864198 8.92399e+07 0.00374469 1.92797e+07 7.74287e+06 1.94003e+07 239 1.94358e+07 1.98399e+07 0.00292702 1.93282e+07 49.8612 0.0151647 0.99672 0 50.1558 GTEX-1GF9V-0226-SM-9MQKA 0 B1 pieces, ~5-10% fascia/vascular elements, rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 675 698 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984799 410216 0.972089 0.987308 0.780309 23246 1 76 0.00561436 151 0 7.63877e+07 0.02765 441215 7.73697e+07 9.30144e+06 23275 3.79894e+07 0 0.19178 0.987308 0.770405 7.63877e+07 0.00724951 1.66797e+07 7.81359e+06 1.69204e+07 163 1.69459e+07 1.17636e+07 0.00642985 1.68343e+07 49.8348 0.00570268 0.989818 0 50.3581 GTEX-1GF9V-0326-SM-7RHI5 0 B1 6 pieces, squamous epithelium is ~60 microns; minimal dermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 675 698 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991162 179645 0.973006 0.993333 0.809098 23603 1 76 0.00240019 311 0 9.83433e+07 0.0266887 487182 9.90034e+07 9.87394e+06 23641 4.89639e+07 0 0.163908 0.993333 0.803703 9.83433e+07 0.00376352 2.12866e+07 1.13793e+07 2.14567e+07 288 2.1484e+07 1.63271e+07 0.00308036 2.14594e+07 49.9713 0.00492086 0.995504 0 50.199 GTEX-1GF9V-0426-SM-7PC11 0 B1 2 pieces, no adherent fat; ~10% occlusive luminal atherosis, delineated 7 Blood Vessel Artery - Tibial 0007610 676 697 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987624 184055 0.974909 0.991403 0.796899 23384 1 76 0.00289832 278 0 1.08697e+08 0.0247264 630852 1.09639e+08 1.57443e+07 23419 5.39928e+07 0 0.17801 0.991403 0.790048 1.08697e+08 0.00485641 2.346e+07 9.79926e+06 2.36795e+07 314 2.37691e+07 1.92145e+07 0.00387363 2.37537e+07 49.9839 0.00575389 0.995181 0 50.2329 GTEX-1GF9V-0526-SM-7PC2T 0 B1 2 pieces, trace adherent fat 6.1 Nerve Nerve - Tibial 0001323 677 696 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989218 393013 0.965921 0.991179 0.731366 25215 1 76 0.00351962 218 0 9.90712e+07 0.0337804 446068 9.99529e+07 1.48317e+07 25262 4.92152e+07 0 0.234555 0.991179 0.724914 9.90712e+07 0.00455352 2.16265e+07 9.93153e+06 2.18584e+07 228 2.19507e+07 1.44450e+07 0.00403555 2.1722e+07 49.7383 0.00446278 0.993139 0 50.2667 GTEX-1GF9V-0626-SM-7MXU1 2 B1 2 pieces, spermatogenesis appears reduced. Interstitial fibrosis, foci of tubular hyalinization noted 5.8 Testis Testis 0000473 677 696 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975454 206778 0.920999 0.985091 0.705747 32444 1 76 0.00308817 125 0 6.60992e+07 0.0787129 840505 6.70996e+07 1.10974e+07 32497 3.2665e+07 0 0.215253 0.985091 0.695224 6.60992e+07 0.00414509 1.34842e+07 1.10725e+07 1.35282e+07 127 1.37948e+07 9.88363e+06 0.00361146 1.37706e+07 49.956 0.0125262 0.994727 0 50.0815 GTEX-1GF9V-0726-SM-9KNU4 2 B1 2 pieces, glandular elements with moderate-advanced autolysis/lsloughing mucosa 6.1 Prostate Prostate 0002367 678 695 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991173 205071 0.965429 0.992371 0.769263 27641 1 76 0.00267136 373 0 1.05242e+08 0.0343361 1.68928e+06 1.06051e+08 1.23097e+07 27688 5.24214e+07 0 0.196166 0.992371 0.763395 1.05242e+08 0.00366722 2.30932e+07 1.07723e+07 2.34388e+07 342 2.33804e+07 1.35535e+07 0.00316869 2.32766e+07 49.8888 0.0159289 0.99357 0 50.3713 GTEX-1GF9V-0826-SM-9KNUV 0 B1 6 pieces, Squamous epithelium is ~40-50 microns; no dermal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 707 666 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993069 312686 0.97143 0.993997 0.764529 24354 1 76 0.0026354 296 0 1.06e+08 0.0283287 580798 1.0664e+08 1.17952e+07 24393 5.28428e+07 0 0.206902 0.993997 0.759939 1.06e+08 0.00313954 2.32556e+07 1.333e+07 2.34659e+07 277 2.34687e+07 1.69589e+07 0.00288724 2.3346e+07 49.8689 0.00544633 0.994926 0 50.225 GTEX-1GF9V-0926-SM-9KNW7 1 B1 2 pieces, no abnormalities 7.2 Thyroid Thyroid 0002046 708 665 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991811 228192 0.963794 0.992829 0.695468 25234 1 76 0.00276913 205 0 9.58021e+07 0.035934 471545 9.64941e+07 1.07185e+07 25293 4.77356e+07 0 0.268326 0.992829 0.69048 9.58021e+07 0.0033205 2.09398e+07 9.74144e+06 2.10993e+07 228 2.11208e+07 1.29238e+07 0.00304453 2.10139e+07 49.8731 0.00488678 0.993847 0 50.1898 GTEX-1GF9V-1026-SM-9KNW3 1 B1 2 pieces, moderate congestion 7.1 Lung Lung 0008952 710 663 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991471 227101 0.973274 0.992866 0.699268 25174 1 76 0.00291164 209 0 1.0268e+08 0.0263525 421314 1.03417e+08 1.22249e+07 25220 5.11237e+07 0 0.274007 0.992866 0.694279 1.0268e+08 0.00399793 2.27935e+07 1.25417e+07 2.2883e+07 248 2.2915e+07 1.42334e+07 0.00345402 2.29032e+07 49.9872 0.00407392 0.99426 0 50.098 GTEX-1GF9V-1126-SM-9MQM7 1 B1 2 pieces, trace fascia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 727 646 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984393 227017 0.976911 0.986446 0.80463 23182 1 76 0.00561265 159 0 7.71774e+07 0.0227709 399149 7.82378e+07 9.40636e+06 23204 3.84151e+07 0 0.172281 0.986446 0.793724 7.71774e+07 0.00703955 1.69544e+07 9.32242e+06 1.71665e+07 166 1.7196e+07 1.3011e+07 0.00632462 1.70776e+07 49.8272 0.00510174 0.9885 0 50.3109 GTEX-1GF9V-1226-SM-7MKGY 1 B1 2 pieces, ~50% macrovesicular steatosis; moderate passive congestion 6.4 Liver Liver 0001114 728 645 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980291 290213 0.973601 0.987839 0.820384 22352 1 76 0.00401292 267 0 8.4142e+07 0.0262846 2.64313e+06 8.51778e+07 1.29329e+07 22370 4.16203e+07 0 0.153217 0.987839 0.810407 8.4142e+07 0.00555248 1.84232e+07 1.44137e+07 1.84369e+07 256 1.86879e+07 9.96575e+06 0.00477682 1.8718e+07 50.0402 0.0310307 0.995387 0 50.0186 GTEX-1GF9V-1526-SM-7PC3E 1 B1 6 pieces, atherosis up to ~0.3mm 6.4 Blood Vessel Artery - Aorta 0001496 733 640 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.983648 428724 0.972138 0.98804 0.780222 23113 1 76 0.00363648 163 0 8.49974e+07 0.0274398 171658 8.60263e+07 1.49762e+07 23138 4.2124e+07 0 0.191916 0.98804 0.770891 8.49974e+07 0.0047062 1.82164e+07 8.46279e+06 1.84086e+07 177 1.86026e+07 1.5203e+07 0.00416896 1.83802e+07 49.6993 0.00199541 0.992431 0 50.2624 GTEX-1GF9V-1626-SM-7PBXL 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic change 6.6 Heart Heart - Left Ventricle 0006566 734 639 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988973 140298 0.984969 0.992214 0.840025 20807 1 76 0.00285962 265 0 8.82274e+07 0.0149003 6.6594e+06 8.89197e+07 1.22918e+07 20821 4.38908e+07 0 0.144944 0.992214 0.833485 8.82274e+07 0.00445824 1.96176e+07 1.98622e+07 1.98972e+07 286 2.00206e+07 9.07460e+06 0.00365632 1.97413e+07 49.6488 0.0748922 0.995456 0 50.3538 GTEX-1GF9V-1726-SM-9KNW4 1 B1 2 pieces, no abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 735 638 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992818 554840 0.965463 0.994051 0.7845 23182 1 76 0.00247915 266 0 1.10486e+08 0.0343608 4.41118e+06 1.11148e+08 1.29022e+07 23213 5.50842e+07 0 0.180963 0.994051 0.779834 1.10486e+08 0.00348998 2.39363e+07 3.09341e+07 2.43106e+07 317 2.4381e+07 1.26743e+07 0.00298394 2.4e+07 49.6063 0.0396875 0.995285 0 50.388 GTEX-1GF9V-1926-SM-9JGHE 2 B1 6 pieces, glomeruli present, advanced tubular autolysis 5.9 Kidney Kidney - Cortex 0001225 740 633 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993561 715618 0.978581 0.994956 0.816202 26805 1 76 0.00197254 520 0 2.36042e+08 0.0212413 1.12655e+07 2.37239e+08 1.16732e+07 26860 1.17631e+08 0 0.162379 0.994956 0.812085 2.36042e+08 0.00306388 5.20671e+07 6.28148e+07 5.31365e+07 543 5.33423e+07 2.2111e+07 0.00251744 5.21764e+07 49.4475 0.0474858 0.99635 0 50.5082 GTEX-1GF9V-2026-SM-9JGHS 3 B1 2 pieces, cortex, advanced autolysis 6.2 Adrenal Gland Adrenal Gland 0002369 742 631 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991339 464196 0.975645 0.992675 0.80689 23056 1 76 0.00215522 372 0 1.32157e+08 0.024097 9.70854e+06 1.33132e+08 6.64958e+06 23092 6.58779e+07 0 0.168755 0.992675 0.800979 1.32157e+08 0.00302132 2.83963e+07 2.07967e+07 2.91295e+07 349 2.92464e+07 1.27602e+07 0.00258768 2.84457e+07 49.3061 0.072924 0.99401 0 50.6373 GTEX-1GF9V-2526-SM-7SB8K 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 7.2 Breast Breast - Mammary Tissue 0008367 755 618 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.986905 355810 0.966666 0.989839 0.672826 24599 1 76 0.00270547 172 0 9.43262e+07 0.033047 382255 9.52945e+07 1.02352e+07 24653 4.68742e+07 0 0.293839 0.989839 0.66599 9.43262e+07 0.00436956 2.06685e+07 1.58941e+07 2.08821e+07 194 2.09762e+07 1.30664e+07 0.00353505 2.08481e+07 49.8469 0.0040113 0.992773 0 50.257 GTEX-1GF9V-2926-SM-7PBXO 1 B1 2 pieces, no abnormalities 6.4 Brain Brain - Cortex 0001870 803 570 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988823 487362 0.958265 0.992372 0.810799 24954 1 76 0.00284782 270 0 1.14713e+08 0.0414919 7.2937e+06 1.15595e+08 1.47006e+07 24981 5.70447e+07 0 0.147466 0.992372 0.804614 1.14713e+08 0.00468383 2.47951e+07 3.5118e+07 2.50575e+07 327 2.50385e+07 1.03562e+07 0.00376254 2.515e+07 50.1111 0.0630973 0.995921 0 50.2631 GTEX-1GF9V-3026-SM-7P8R8 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cerebellum 0002037 804 569 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.987992 584277 0.950053 0.989939 0.748161 25006 1 76 0.00315299 272 0 1.16011e+08 0.0496628 4.12894e+06 1.1719e+08 1.63897e+07 25054 5.77375e+07 0 0.201892 0.989939 0.740634 1.16011e+08 0.00373551 2.4934e+07 2.29771e+07 2.54963e+07 299 2.55368e+07 1.15196e+07 0.00344368 2.50919e+07 49.5606 0.035233 0.991886 0 50.5575 GTEX-1GF9V-3126-SM-7MKHH 1 B1 1 piece, ~50% each adenohypophysis and neurohypophysis (delineated), ~4x4mm 6.6 Pituitary Pituitary 0000007 805 568 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.986458 287014 0.960806 0.99087 0.768006 24704 1 76 0.00396594 128 0 7.09679e+07 0.0389616 571424 7.16219e+07 1.02637e+07 24737 3.52172e+07 0 0.192801 0.99087 0.760994 7.09679e+07 0.004758 1.46168e+07 1.01949e+07 1.48968e+07 152 1.50371e+07 1.06105e+07 0.00436021 1.47621e+07 49.5385 0.00797835 0.995282 0 50.4743 GTEX-1GF9W-0004-SM-7J3AL B1 Blood Whole Blood 0013756 476 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GF9W-0004-SM-7MA6X B1 Blood Whole Blood 0013756 476 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GF9W-0006-SM-ARZL1 B1 8.3 Blood Whole Blood 0013756 476 BP-56323 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.973029 668644 0.973433 0.975548 0.805765 17143 1 76 0.0024488 96 0 6.83931e+07 0.0261369 246603 7.01074e+07 2.61759e+06 17149 3.39059e+07 0 0.167668 0.975548 0.786063 6.83931e+07 0.00378927 1.5776e+07 9.00512e+07 1.59874e+07 110 1.62156e+07 1.86721e+07 0.0031173 1.57285e+07 49.2376 0.0035175 0.978067 0 50.3328 GTEX-1GF9W-0008-SM-EAZCY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 657 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993644 501866 0.983856 0.994524 0.873819 20416 1 76 0.0016739 296 0 1.20606e+08 0.0158132 259439 1.2127e+08 7.9719e+06 20433 6.01282e+07 0 0.110037 0.994524 0.869034 1.20606e+08 0.00261403 2.72316e+07 1.11801e+07 2.73156e+07 310 2.73559e+07 3.20328e+07 0.00214355 2.72933e+07 49.9428 0.00213936 0.995404 0 50.0769 GTEX-1GF9W-0011-R10a-SM-9OSXH B1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 486 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99174 533759 0.961072 0.994059 0.850675 24877 1 76 0.00259935 272 0 1.1332e+08 0.0385184 3.46258e+06 1.13998e+08 1.08728e+07 24907 5.64015e+07 0 0.110396 0.994059 0.845621 1.1332e+08 0.00376472 2.47204e+07 1.60531e+07 2.49113e+07 324 2.49729e+07 1.45059e+07 0.00318068 2.48939e+07 49.9208 0.0303742 0.996377 0 50.1923 GTEX-1GF9W-0011-R11b-SM-9OSXG B1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 486 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989006 441737 0.948718 0.992082 0.787798 23572 1 76 0.0029096 270 0 8.91124e+07 0.0510151 2.25848e+06 8.98236e+07 9.54797e+06 23600 4.43048e+07 0 0.16092 0.992082 0.78156 8.91124e+07 0.00388435 1.911e+07 1.37442e+07 1.9494e+07 269 1.95272e+07 9.55159e+06 0.00339547 1.93211e+07 49.7347 0.0251435 0.995158 0 50.4974 GTEX-1GF9W-0011-R1a-SM-9QEIQ B1, A1 6.7 Brain Brain - Hippocampus 0001954 486 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990813 435565 0.958626 0.993829 0.846258 23168 1 76 0.00215257 271 0 8.3365e+07 0.0411266 5.85733e+06 8.38826e+07 4.21858e+06 23186 4.14848e+07 0 0.112367 0.993829 0.841036 8.3365e+07 0.0042575 1.82101e+07 1.72269e+07 1.85297e+07 295 1.84939e+07 8.2973e+06 0.00320184 1.84522e+07 49.9436 0.0698277 0.996845 0 50.435 GTEX-1GF9W-0011-R3b-SM-CJI2S B1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 486 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993382 816585 0.968323 0.994687 0.847559 23689 1 76 0.00235441 371 0 1.00416e+08 0.0313842 7.14387e+06 1.00952e+08 6.05107e+06 23707 5.00069e+07 0 0.120763 0.994687 0.843057 1.00416e+08 0.00288729 2.17936e+07 2.32666e+07 2.24216e+07 352 2.24144e+07 1.00362e+07 0.0026205 2.18956e+07 49.4146 0.0707648 0.995993 0 50.7102 GTEX-1GF9W-0011-R4a-SM-CE6RH B1, A1 5.9 Brain Brain - Amygdala 0001876 486 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98908 339220 0.969485 0.990938 0.852018 21743 1 76 0.00839529 157 0 7.35926e+07 0.030366 9.40519e+06 7.42656e+07 1.20543e+07 21756 3.66123e+07 0 0.117467 0.990938 0.844296 7.35926e+07 0.00832461 1.60062e+07 1.95254e+07 1.65569e+07 200 1.64327e+07 4.9802e+06 0.00836002 1.6228e+07 49.6867 0.126643 0.992796 0 50.8456 GTEX-1GF9W-0011-R5a-SM-CKZO4 B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 486 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991407 795806 0.958328 0.993449 0.820493 25637 1 76 0.00233889 373 0 1.21683e+08 0.0413589 6.6168e+06 1.22485e+08 1.15644e+07 25668 6.05959e+07 0 0.137835 0.993449 0.815118 1.21683e+08 0.00340903 2.63029e+07 2.91575e+07 2.681e+07 341 2.67954e+07 1.31187e+07 0.00287286 2.65284e+07 49.7497 0.0540213 0.995492 0 50.4774 GTEX-1GF9W-0011-R6b-SM-9QEIE B1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 486 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.99002 463100 0.961973 0.993388 0.842512 24723 1 76 0.00223046 272 0 1.19785e+08 0.0377694 9.25055e+06 1.20582e+08 5.80218e+06 24749 5.95818e+07 0 0.11946 0.993388 0.836942 1.19785e+08 0.0043385 2.59987e+07 2.42835e+07 2.64483e+07 330 2.6426e+07 1.18105e+07 0.0032809 2.6354e+07 49.9318 0.0767159 0.996756 0 50.4286 GTEX-1GF9W-0011-R7b-SM-9QEIF B1, A1 6.3 Brain Brain - Putamen (basal ganglia) 0001874 486 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989277 495470 0.95961 0.992842 0.842797 21646 1 76 0.00242373 265 0 8.11421e+07 0.0402893 9.87409e+06 8.17271e+07 3.88762e+06 21658 4.03547e+07 0 0.116813 0.992842 0.836764 8.11421e+07 0.00471011 1.76123e+07 2.81605e+07 1.78008e+07 320 1.78191e+07 4.4662e+06 0.00356281 1.7821e+07 50.0026 0.120818 0.996407 0 50.2661 GTEX-1GF9W-0011-R8b-SM-9QEIR B1, A1 6.1 Brain Brain - Hypothalamus 0001898 486 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991065 314612 0.957001 0.993806 0.826269 24024 1 76 0.00206671 207 0 7.2903e+07 0.0427763 4.59914e+06 7.33574e+07 3.35923e+06 24046 3.62739e+07 0 0.130732 0.993806 0.82115 7.2903e+07 0.00423168 1.59385e+07 1.19556e+07 1.61402e+07 244 1.60994e+07 7.54878e+06 0.00314621 1.61435e+07 50.0684 0.0626949 0.996546 0 50.3144 GTEX-1GF9W-0011-R9b-SM-9WG7J B1, A1 5.8 Brain Brain - Spinal cord (cervical c-1) 0006469 486 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992936 175944 0.975057 0.995227 0.858168 20211 1 76 0.00298732 379 0 8.27422e+07 0.0248337 9.11683e+06 8.3139e+07 5.40048e+06 20221 4.12093e+07 0 0.116889 0.995227 0.854072 8.27422e+07 0.00428803 1.84335e+07 1.82806e+07 1.87389e+07 334 1.84933e+07 5.17282e+06 0.00363618 1.88126e+07 50.4279 0.109658 0.997519 0 50.4108 GTEX-1GF9W-0126-SM-7PC12 1 B1 2 pieces; 10% and 15% internal/external fat 7.5 Nerve Nerve - Tibial 0001323 652 584 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988253 216831 0.969368 0.991619 0.765054 25345 1 76 0.003016 287 0 1.15008e+08 0.0303232 516781 1.1598e+08 1.60453e+07 25391 5.71669e+07 0 0.204314 0.991619 0.758642 1.15008e+08 0.00461853 2.51581e+07 1.07589e+07 2.53978e+07 308 2.54925e+07 1.83306e+07 0.00381454 2.54307e+07 49.9393 0.00445578 0.994985 0 50.2371 GTEX-1GF9W-0226-SM-7PC2U 1 B1 2 pieces; eccentric fibrosclerotic plaque with >50% luminal compromise 7.2 Blood Vessel Artery - Tibial 0007610 654 582 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987563 381459 0.975479 0.990949 0.84126 22317 1 76 0.00341653 216 0 9.47679e+07 0.024095 417263 9.56335e+07 1.60642e+07 22333 4.70322e+07 0 0.134218 0.990949 0.833646 9.47679e+07 0.00454161 2.02726e+07 8.91647e+06 2.04788e+07 225 2.05936e+07 1.92e+07 0.00397715 2.04634e+07 49.8414 0.00436315 0.994336 0 50.2529 GTEX-1GF9W-0326-SM-9KNUN 1 B1 6 pieces; up to 5-10% dermal fat; epidermis 30 to 40 microns thick 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 656 580 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993069 232108 0.971119 0.9942 0.777401 24544 1 76 0.00281227 301 0 1.02316e+08 0.0285984 726612 1.02913e+08 1.27435e+07 24591 5.09966e+07 0 0.193718 0.9942 0.772892 1.02316e+08 0.00340987 2.23476e+07 1.27886e+07 2.25745e+07 272 2.25891e+07 1.72763e+07 0.00311073 2.24408e+07 49.8354 0.00706044 0.995332 0 50.2526 GTEX-1GF9W-0426-SM-9MQKK 1 B1 2 pieces; mature adipose tissue with from 5-20% fibrovascular tissue and sweat glands (arrows) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 658 578 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 EXCLUDE 0.985482 176752 0.97508 0.987515 0.795876 23562 1 76 0.00585557 147 0 7.10778e+07 0.0246311 498814 7.19764e+07 8.72807e+06 23587 3.53811e+07 0 0.179204 0.987515 0.78594 7.10778e+07 0.00738545 1.55611e+07 7.23026e+06 1.57653e+07 146 1.57813e+07 1.22853e+07 0.00661893 1.56791e+07 49.8375 0.00693024 0.989547 0 50.3259 GTEX-1GF9W-0526-SM-9MQJP 1 B1 2 pieces; essentially well trimmed with insignificant amount of fat 7.7 Muscle Muscle - Skeletal 0011907 660 576 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986579 235149 0.982287 0.988609 0.872036 19769 1 76 0.00562103 139 0 6.53146e+07 0.0175045 731539 6.60672e+07 7.89583e+06 19775 3.25202e+07 0 0.11025 0.988609 0.862103 6.53146e+07 0.00700334 1.42285e+07 7.13424e+06 1.4561e+07 146 1.45544e+07 1.25078e+07 0.00631076 1.43489e+07 49.6444 0.0110727 0.990639 0 50.5775 GTEX-1GF9W-0626-SM-7MXVJ 1 B1 2 pieces; interstitial fibrosis and micronodularity with rare collection of lymphocytes 7.2 Thyroid Thyroid 0002046 669 567 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976929 156688 0.969337 0.9863 0.782148 23766 1 76 0.00301548 138 0 7.52398e+07 0.0303139 134288 7.62849e+07 1.22848e+07 23793 3.71881e+07 0 0.187189 0.9863 0.771433 7.52398e+07 0.00410115 1.63716e+07 8.98743e+06 1.6429e+07 158 1.67274e+07 1.38301e+07 0.00355316 1.67397e+07 50.0184 0.00176035 0.995671 0 50.0875 GTEX-1GF9W-0826-SM-7MKHI 1 B1 2 pieces; extensive hemorrhagic central necrosis 6.1 Liver Liver 0001114 675 561 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985656 271112 0.980827 0.990338 0.851543 21010 1 76 0.00394512 162 0 7.73403e+07 0.0189617 1.21788e+06 7.80948e+07 1.10015e+07 21021 3.83727e+07 0 0.129284 0.990338 0.843315 7.73403e+07 0.00532024 1.69471e+07 1.09754e+07 1.71502e+07 184 1.73103e+07 1.34861e+07 0.00462943 1.7125e+07 49.7311 0.0155949 0.99502 0 50.2978 GTEX-1GF9W-1026-SM-7SB8X 1 B1 2 fragmented pieces; lobulated mature adipose tissue 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 679 557 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.99203 232574 0.969945 0.993782 0.772166 23851 1 76 0.00260064 210 0 9.09838e+07 0.0297501 392315 9.15531e+07 9.16858e+06 23889 4.52945e+07 0 0.197779 0.993782 0.767364 9.09838e+07 0.0040264 1.97785e+07 1.21995e+07 1.99605e+07 223 1.99603e+07 1.53721e+07 0.00331226 1.99354e+07 49.9688 0.00428511 0.995534 0 50.2289 GTEX-1GF9W-1326-SM-7P8PX 2 B1 6 pieces; congestion; focal severe autolysis; rare hyalinized glomeruli (outlined) 6 Kidney Kidney - Cortex 0001225 689 547 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.99069 228735 0.978537 0.99227 0.852028 23598 1 76 0.00345189 269 0 1.09378e+08 0.0212526 7.14078e+06 1.1023e+08 1.49365e+07 23622 5.44957e+07 0 0.12651 0.99227 0.845442 1.09378e+08 0.0039634 2.41162e+07 1.58648e+07 2.51423e+07 303 2.5178e+07 1.30795e+07 0.00370724 2.42399e+07 49.0509 0.0647806 0.99385 0 51.0415 GTEX-1GF9W-1426-SM-7PBYM 1 B1 6 pieces; hair-bearing skin with up to seven follicles and 10-15% dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 691 545 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986404 208649 0.975085 0.990707 0.754456 24793 1 76 0.00316393 230 0 9.607e+07 0.0246097 607735 9.69712e+07 1.40187e+07 24840 4.7715e+07 0 0.220628 0.990707 0.747445 9.607e+07 0.00486111 2.10942e+07 1.14763e+07 2.12944e+07 248 2.14234e+07 1.50633e+07 0.00400884 2.13559e+07 49.9211 0.00626717 0.995009 0 50.2362 GTEX-1GF9W-1726-SM-9JGHY 2 B1 6 pieces; autolyzed squamous epithelium and chronic inflammation in submucosa with scattered small aggregates of lymphocytes 5.8 Esophagus Esophagus - Mucosa 0006920 706 530 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 EXCLUDE 0.991332 634320 0.964212 0.992771 0.765879 27080 1 76 0.00199377 376 0 1.25721e+08 0.0355616 855071 1.26637e+08 5.79193e+06 27133 6.26132e+07 0 0.198333 0.992771 0.760343 1.25721e+08 0.00316734 2.74944e+07 1.16505e+07 2.76371e+07 358 2.76131e+07 1.89693e+07 0.00257971 2.76958e+07 50.0748 0.00675216 0.99421 0 50.1294 GTEX-1GF9W-1926-SM-9KNUM 1 B1 6 pieces; atherosclerotic plaque; congested adventitia up to 0.5mm 7.3 Blood Vessel Artery - Aorta 0001496 711 525 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.99368 137720 0.977696 0.994782 0.816697 22518 1 76 0.00260949 278 0 9.6709e+07 0.0219061 163836 9.72162e+07 1.09592e+07 22536 4.81933e+07 0 0.160999 0.994782 0.812436 9.6709e+07 0.00343706 2.10678e+07 7.79893e+06 2.12384e+07 267 2.12308e+07 1.89015e+07 0.00302282 2.11807e+07 49.941 0.00168527 0.995885 0 50.2017 GTEX-1GF9W-2026-SM-7MXVO 2 B1 2 pieces; fibromuscular stroma and largely sloughed glandular component with scattered calcifications (outlined) 5.7 Prostate Prostate 0002367 717 519 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975233 86199 0.966111 0.985059 0.752496 23844 1 76 0.00308464 118 0 5.79518e+07 0.0336401 580641 5.88307e+07 9.09128e+06 23871 2.86192e+07 0 0.213615 0.985059 0.741253 5.79518e+07 0.00445759 1.25208e+07 6.58357e+06 1.25964e+07 125 1.28048e+07 8.71408e+06 0.00376427 1.28516e+07 50.0911 0.00986969 0.994885 0 50.1504 GTEX-1GF9W-2126-SM-7MXUX 2 B1 2 pieces; decreased spermatogenesis; interstitial fibrosis and sclerosis of tubules (arrows) 5.9 Testis Testis 0000473 719 517 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975648 185183 0.924636 0.985174 0.711824 33195 1 76 0.00313436 147 0 7.75217e+07 0.0750116 423985 7.86884e+07 1.22355e+07 33252 3.83127e+07 0 0.212812 0.985174 0.70127 7.75217e+07 0.0042637 1.5776e+07 1.15867e+07 1.58096e+07 143 1.61268e+07 1.26734e+07 0.00369357 1.61016e+07 49.961 0.00538815 0.994699 0 50.0532 GTEX-1GF9W-2626-SM-7P8TA 1 B1 2 pieces; one piece fragmented 6.2 Brain Brain - Cortex 0001870 781 455 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.941088 532364 0.959249 0.967997 0.817206 25633 1 76 0.00446374 269 0 9.796e+07 0.0403329 3.6871e+06 1.01199e+08 1.57032e+07 25653 4.74734e+07 0 0.142043 0.967997 0.791053 9.796e+07 0.00853785 2.09903e+07 2.04143e+07 2.07037e+07 263 2.20607e+07 1.18833e+07 0.00644416 2.21203e+07 50.0675 0.0364343 0.994906 0 49.6563 GTEX-1GF9W-2726-SM-9JGGW 1 B1 2 pieces; Purkinje cells well visualized; congested meninges (arrows) 6.9 Brain Brain - Cerebellum 0002037 783 453 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992539 306288 0.939005 0.993931 0.748201 23626 1 76 0.00222019 121 0 5.38824e+07 0.0607962 1.05546e+06 5.42114e+07 2.80237e+06 23645 2.68388e+07 0 0.190804 0.993931 0.74366 5.38824e+07 0.00340673 1.14513e+07 1.28697e+07 1.16766e+07 139 1.16352e+07 5.86232e+06 0.00281263 1.15637e+07 49.8459 0.0194692 0.995323 0 50.4871 GTEX-1GF9W-2826-SM-7MKGE 1 B1 1 piece; 80% adenohypophysis and 20% neurohypophysis; dura and external fat up to 0.9mm 6.9 Pituitary Pituitary 0000007 786 450 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.984162 389748 0.963162 0.989595 0.783233 25218 1 76 0.00386286 205 0 8.98532e+07 0.0365876 448584 9.07979e+07 1.30552e+07 25255 4.45341e+07 0 0.179929 0.989595 0.775084 8.98532e+07 0.00508547 1.89063e+07 1.28877e+07 1.92363e+07 209 1.94737e+07 1.5443e+07 0.00447081 1.91214e+07 49.5435 0.00494047 0.995028 0 50.4325 GTEX-1GF9X-0001-SM-EAZCN B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -43 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992326 1.08931e+06 0.968319 0.993343 0.820162 22204 1 76 0.00214165 283 0 1.11702e+08 0.0309777 471448 1.12451e+08 8.31312e+06 22235 5.56434e+07 0 0.148157 0.993343 0.814703 1.11702e+08 0.00303269 2.49006e+07 1.40636e+07 2.50103e+07 275 2.50513e+07 2.6516e+07 0.00258671 2.4968e+07 49.9168 0.00419249 0.994361 0 50.1099 GTEX-1GF9X-0003-SM-7J3A6 B1 Blood Whole Blood 0013756 -43 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GF9X-0003-SM-7MA6J B1 Blood Whole Blood 0013756 -43 BP-56302 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GF9X-0005-SM-A9G3R B1 8.7 Blood Whole Blood 0013756 -43 BP-56323 RNA isolation_PAXgene Blood RNA (Manual) 09/03/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.977709 425020 0.965449 0.982214 0.80331 18543 1 76 0.00367695 99 0 6.63576e+07 0.0339042 323301 6.75592e+07 5.27578e+06 18547 3.29573e+07 0 0.162139 0.982214 0.789022 6.63576e+07 0.00441219 1.51074e+07 7.69532e+07 1.52334e+07 109 1.53371e+07 1.55149e+07 0.00403805 1.53046e+07 49.947 0.00478545 0.986719 0 50.2077 GTEX-1GF9X-0008-SM-EAZCX B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 485 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99294 488185 0.984188 0.993965 0.874081 20713 1 76 0.00172546 296 0 1.14153e+08 0.0154628 210728 1.14847e+08 8.94797e+06 20727 5.68995e+07 0 0.110108 0.993965 0.868805 1.14153e+08 0.00249671 2.57604e+07 1.05125e+07 2.58297e+07 289 2.58579e+07 3.10866e+07 0.00211068 2.58437e+07 49.9862 0.00183487 0.99499 0 50.0671 GTEX-1GF9X-0126-SM-A9G38 1 B1 2 pieces; 1 piece has a 0.84 mm adenomatoid nodule (benign) or microadenoma. That piece has 50% fatty & vascular stroma 7.7 Thyroid Thyroid 0002046 374 1108 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983871 266934 0.961531 0.989697 0.716076 25291 1 76 0.00420008 161 0 9.07405e+07 0.0382188 291550 9.16851e+07 9.4283e+06 25351 4.50034e+07 0 0.245455 0.989697 0.708698 9.07405e+07 0.00389688 1.94788e+07 9.78104e+06 1.98437e+07 195 2.0042e+07 1.30666e+07 0.00405136 1.97585e+07 49.6439 0.0031799 0.995523 0 50.464 GTEX-1GF9X-0226-SM-7P8SM 0 B1 2 pieces with 3 salivary glands and >50% muscular, vascular, neural and fibrous contents; 8 Salivary Gland Minor Salivary Gland 0006330 371 1111 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.951286 359785 0.970769 0.972384 0.806158 25340 1 76 0.0043017 227 0 9.12746e+07 0.0285047 639126 9.38668e+07 1.38047e+07 25372 4.44926e+07 0 0.164612 0.972384 0.783895 9.12746e+07 0.00791324 1.99866e+07 1.63537e+07 1.99606e+07 225 2.10046e+07 1.58465e+07 0.00606829 2.08767e+07 49.8473 0.00680886 0.993482 0 49.9675 GTEX-1GF9X-0326-SM-7P8R9 1 B1 2 pieces; focal pigmented alveolar macrophages 7.9 Lung Lung 0008952 378 1104 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991152 185616 0.969265 0.992493 0.765564 24463 1 76 0.00318696 162 0 7.58822e+07 0.0303539 215335 7.64562e+07 1.0498e+07 24492 3.78011e+07 0 0.203701 0.992493 0.759817 7.58822e+07 0.00337001 1.67048e+07 6.79493e+06 1.68905e+07 183 1.69365e+07 1.26997e+07 0.00327836 1.67522e+07 49.7265 0.00281645 0.993833 0 50.2763 GTEX-1GF9X-0426-SM-7MKHN 1 B1 2 pieces; severe (>75%) macrovesicular steatosis 7.7 Liver Liver 0001114 380 1102 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985488 266099 0.973538 0.990379 0.818364 22142 1 76 0.00399103 196 0 8.57887e+07 0.0262337 893100 8.66221e+07 1.29871e+07 22163 4.25653e+07 0 0.155173 0.990379 0.810491 8.57887e+07 0.004965 1.83636e+07 1.47873e+07 1.84948e+07 230 1.86205e+07 1.46621e+07 0.00447561 1.86187e+07 49.9976 0.0103103 0.995269 0 50.1779 GTEX-1GF9X-0726-SM-7SB7V 1 B1 4 small pieces, 2 are muscle, 2 are fat 7.4 Esophagus Esophagus - Muscularis 0004648 400 1082 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.99066 429309 0.963035 0.993336 0.725344 25843 1 76 0.00260024 220 0 9.66253e+07 0.0366773 443764 9.72735e+07 1.07085e+07 25902 4.80604e+07 0 0.237691 0.993336 0.72051 9.66253e+07 0.00423825 2.10434e+07 1.26013e+07 2.12638e+07 216 2.13253e+07 1.46063e+07 0.00341704 2.12325e+07 49.891 0.00456202 0.996012 0 50.2605 GTEX-1GF9X-0926-SM-7PC2X 1 B1 2 pieces; minimal fibrous content 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 409 1073 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989043 404247 0.972019 0.991903 0.815097 24285 1 76 0.00350446 212 0 9.32208e+07 0.027685 602502 9.39818e+07 1.5264e+07 24308 4.63054e+07 0 0.156922 0.991903 0.808497 9.32208e+07 0.00473018 2.03625e+07 9.9921e+06 2.05915e+07 238 2.06874e+07 1.55332e+07 0.00411555 2.0523e+07 49.8006 0.00641084 0.994762 0 50.2796 GTEX-1GF9X-1026-SM-ACKX2 1 B1 2 pieces; atrophic cystic ducts and dense fibrous tissue; 1 piece has 20% skeletal muscle content 7.7 Breast Breast - Mammary Tissue 0008367 420 1062 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991205 328555 0.972634 0.993284 0.780996 24966 1 76 0.00288588 280 0 9.46741e+07 0.0269498 402511 9.53142e+07 1.28342e+07 25000 4.7112e+07 0 0.191638 0.993284 0.775751 9.46741e+07 0.00409954 2.08443e+07 9.89808e+06 2.10687e+07 256 2.11027e+07 1.57291e+07 0.00349144 2.09977e+07 49.8752 0.00422299 0.995363 0 50.2677 GTEX-1GF9X-1126-SM-7MKHC 1 B1 2 pieces; 20% scattered internal fat on both; 30% external fat on 1 6.6 Pancreas Pancreas 0001150 426 1056 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983056 203456 0.981736 0.988751 0.854683 20231 1 76 0.00398077 88 0 6.04636e+07 0.0179984 222410 6.11515e+07 8.73063e+06 20241 2.997e+07 0 0.127054 0.988751 0.845068 6.04636e+07 0.00569775 1.38873e+07 2.19377e+07 1.40905e+07 98 1.41889e+07 1.8579e+07 0.00483432 1.41358e+07 49.9063 0.00363703 0.994446 0 50.3631 GTEX-1GF9X-1326-SM-7PC2Y 0 B1 6 pieces; 10% dermal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 434 1048 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989031 638541 0.973889 0.991932 0.798422 24694 1 76 0.00330479 400 0 1.25773e+08 0.0258588 817115 1.26796e+08 1.94167e+07 24738 6.24883e+07 0 0.175468 0.991932 0.79198 1.25773e+08 0.00494955 2.7366e+07 1.43429e+07 2.76336e+07 344 2.78189e+07 2.18109e+07 0.00412476 2.75305e+07 49.7395 0.00644433 0.994833 0 50.2433 GTEX-1GF9X-1426-SM-7RHGX 1 B1 6 pieces; well dissected muscle 6.4 Colon Colon - Sigmoid 0001159 448 1034 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.99149 237846 0.968819 0.993693 0.787437 24112 1 76 0.00261386 273 0 1.02979e+08 0.030979 1.29626e+06 1.03632e+08 1.02681e+07 24142 5.1255e+07 0 0.181382 0.993693 0.782471 1.02979e+08 0.00395795 2.22434e+07 9.20608e+06 2.25114e+07 324 2.25006e+07 1.43896e+07 0.00328442 2.24656e+07 49.961 0.0125083 0.995896 0 50.2994 GTEX-1GF9X-1526-SM-7P8QP 1 B1 6 pieces; only 2 have full thickness; 4 have mucosa only 6.1 Colon Colon - Transverse 0001157 458 1024 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.986474 482472 0.969803 0.988732 0.804715 24988 1 76 0.00289039 278 0 1.10267e+08 0.0299187 1.48921e+06 1.11524e+08 1.30114e+07 25030 5.48729e+07 0 0.165088 0.988732 0.795648 1.10267e+08 0.0043668 2.41548e+07 1.32048e+07 2.44893e+07 303 2.45743e+07 1.57098e+07 0.00362691 2.4298e+07 49.7174 0.0133532 0.990991 0 50.3439 GTEX-1GF9X-1726-SM-7SB8D 1 B1 2 pieces; 30% internal fat on 1, 30% external fat on the other 5.7 Nerve Nerve - Tibial 0001323 476 1006 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989286 316627 0.949039 0.991515 0.602634 25702 1 76 0.00299632 150 0 8.21468e+07 0.0507559 428915 8.28498e+07 9.10554e+06 25775 4.08366e+07 0 0.346406 0.991515 0.59752 8.21468e+07 0.00453422 1.77519e+07 1.04728e+07 1.79562e+07 154 1.79599e+07 8.40529e+06 0.00376354 1.79223e+07 49.9476 0.00517702 0.993744 0 50.286 GTEX-1GF9X-1826-SM-7PC3X 1 B1 2 pieces; well trimmed 6.7 Blood Vessel Artery - Tibial 0007610 479 1003 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.988235 564001 0.974464 0.99113 0.820933 22392 1 76 0.00346062 271 0 1.00444e+08 0.025195 744388 1.01342e+08 1.58406e+07 22408 4.98596e+07 0 0.153531 0.99113 0.813652 1.00444e+08 0.0046982 2.16669e+07 8.17733e+06 2.18708e+07 257 2.20155e+07 1.77956e+07 0.0040776 2.17925e+07 49.7454 0.00734528 0.994025 0 50.2341 GTEX-1GF9X-1926-SM-ADEIC 1 B1 2 pieces; <5% fibrous content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 482 1000 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981709 410344 0.97601 0.988134 0.827809 23350 1 76 0.00358169 275 0 9.35961e+07 0.0236886 947324 9.47201e+07 1.10468e+07 23374 4.63816e+07 0 0.148201 0.988134 0.817985 9.35961e+07 0.00305066 2.03885e+07 9.38260e+06 2.0833e+07 265 2.10666e+07 1.60419e+07 0.0033179 2.0695e+07 49.5551 0.0100013 0.994558 0 50.5392 GTEX-1GF9X-2026-SM-7PC3A 1 B1 6 pieces; deep fat not trimmed on half pieces; 10% dermal fat 7 Skin Skin - Sun Exposed (Lower leg) 0004264 492 990 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984979 431923 0.974765 0.989585 0.828965 23926 1 76 0.0033864 247 0 9.01987e+07 0.0249516 979740 9.1148e+07 1.46449e+07 23955 4.47172e+07 0 0.145799 0.989585 0.820331 9.01987e+07 0.00549045 1.95938e+07 1.13808e+07 1.97215e+07 222 1.99241e+07 1.5406e+07 0.00443353 1.97901e+07 49.8312 0.0107489 0.99419 0 50.1624 GTEX-1GF9X-2126-SM-7PBXN 1 B1 3 pieces; focal (5%) admixture with dense collagen (tendon) on 2 pieces 8 Muscle Muscle - Skeletal 0011907 494 988 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989015 124588 0.982143 0.992818 0.870665 19900 1 76 0.00279179 161 0 7.11895e+07 0.0176787 2.1054e+06 7.17045e+07 1.00352e+07 19907 3.53996e+07 0 0.111478 0.992818 0.864411 7.11895e+07 0.00448699 1.55901e+07 9.18965e+06 1.57298e+07 169 1.58003e+07 1.39348e+07 0.00363615 1.57595e+07 49.9354 0.0293621 0.99662 0 50.223 GTEX-1GF9X-2326-SM-7PBZD 1 B1 6 pieces; papillary surface on some pieces 6.1 Vagina Vagina 0000996 500 982 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6761 04/12/2015 TruSeq.v1 EXCLUDE 0.989861 172261 0.980236 0.993133 0.841456 21511 1 76 0.00296869 370 0 1.10718e+08 0.0196261 4.99077e+06 1.11483e+08 1.46232e+07 21528 5.50792e+07 0 0.13878 0.993133 0.835678 1.10718e+08 0.00494349 2.42547e+07 2.06576e+07 2.44717e+07 338 2.46152e+07 1.42417e+07 0.00395284 2.44192e+07 49.8001 0.0447671 0.996406 0 50.2227 GTEX-1GF9X-2426-SM-7SB7W 1 B1 2 pieces; atrophic; ovarian parenchyma comprises 20% 6.3 Ovary Ovary 0000992 502 980 BP-57685 RNA Extraction from Paxgene-derived Lysate Plate Based 10/30/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.990688 319458 0.957274 0.992681 0.609992 26037 1 76 0.00296642 147 0 9.0463e+07 0.0424793 403158 9.113e+07 9.94814e+06 26118 4.50072e+07 0 0.347282 0.992681 0.605527 9.0463e+07 0.00403681 1.96556e+07 1.16803e+07 1.98759e+07 161 1.99129e+07 1.10159e+07 0.00350054 1.97939e+07 49.8501 0.00442399 0.994674 0 50.2787 GTEX-1GL5R-0002-SM-7J3A9 B1 Blood Whole Blood 0013756 -87 BP-56367 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/05/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GL5R-0002-SM-7MA6L B1 Blood Whole Blood 0013756 -87 BP-56367 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/05/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GL5R-0008-SM-EAZCZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 195 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992984 489066 0.984773 0.993975 0.874037 20495 1 76 0.00174723 291 0 1.10712e+08 0.0149148 204060 1.11383e+08 8.86454e+06 20511 5.51856e+07 0 0.110736 0.993975 0.868771 1.10712e+08 0.00263684 2.5043e+07 9.60682e+06 2.51121e+07 281 2.51405e+07 2.97909e+07 0.00219159 2.51193e+07 49.979 0.00183206 0.994965 0 50.0689 GTEX-1GL5R-0126-SM-9WYTI 1 B1 6 pieces; mild atherosclerosis 6.8 Blood Vessel Artery - Aorta 0001496 88 490 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99353 262791 0.971592 0.994813 0.799094 22786 1 76 0.00249354 276 0 9.95894e+07 0.0280843 369367 1.00109e+08 7.04401e+06 22825 4.96248e+07 0 0.172499 0.994813 0.794949 9.95894e+07 0.00419061 2.16099e+07 7.72215e+06 2.18374e+07 292 2.18234e+07 1.65008e+07 0.00334098 2.17467e+07 49.912 0.00368966 0.996096 0 50.2619 GTEX-1GL5R-0226-SM-7SB93 1 B1 2 pieces; severe calcific atherosclerosis with narrowing of the lumen, residual attached fat up to 1.1 mm 6.3 Blood Vessel Artery - Coronary 0001621 93 485 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.987965 268640 0.958932 0.99106 0.717402 23165 1 76 0.00277607 124 0 5.83897e+07 0.0408201 498006 5.89164e+07 6.5949e+06 23199 2.90239e+07 0 0.241531 0.99106 0.710988 5.83897e+07 0.00450757 1.26195e+07 1.03459e+07 1.28228e+07 131 1.2848e+07 7.55141e+06 0.00363911 1.27696e+07 49.8468 0.00845276 0.994154 0 50.3996 GTEX-1GL5R-0326-SM-9WYTJ 0 B1 2 pieces; 1 piece includes 10% fat and vessels 8.7 Heart Heart - Left Ventricle 0006566 104 474 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993321 211215 0.983797 0.994516 0.843454 20852 1 76 0.0024632 268 0 9.71541e+07 0.0159468 2.59175e+06 9.76898e+07 6.4069e+06 20867 4.84436e+07 0 0.140343 0.994516 0.838829 9.71541e+07 0.00424589 2.12303e+07 2.61907e+07 2.14003e+07 291 2.12177e+07 1.4008e+07 0.00335347 2.14954e+07 50.3251 0.0265304 0.995712 0 50.1994 GTEX-1GL5R-0426-SM-9WPOP 1 B1 2 pieces; both are ~50% fat 7.9 Heart Heart - Atrial Appendage 0006631 107 471 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987506 270963 0.980668 0.989202 0.828352 21396 1 76 0.00659989 154 0 8.01897e+07 0.0191269 1.66926e+06 8.1065e+07 1.28615e+07 21409 3.99293e+07 0 0.152316 0.989202 0.819408 8.01897e+07 0.00700417 1.71328e+07 2.24149e+07 1.73672e+07 197 1.72358e+07 1.00805e+07 0.00680168 1.73645e+07 50.186 0.0205916 0.990898 0 50.3398 GTEX-1GL5R-0526-SM-9WPOQ 0 B1 2 pieces; collapse, reactive changes with mild acute inflammation 8.4 Lung Lung 0008952 121 457 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986532 338843 0.968417 0.988444 0.766733 25075 1 76 0.00645969 141 0 7.70606e+07 0.0309736 308704 7.79615e+07 1.20313e+07 25116 3.83385e+07 0 0.201684 0.988444 0.757873 7.70606e+07 0.00715994 1.70645e+07 7.76302e+06 1.7113e+07 147 1.71738e+07 1.28979e+07 0.00680914 1.71399e+07 49.9507 0.0039597 0.990357 0 50.0709 GTEX-1GL5R-0626-SM-7PBZY 1 B1 2 pieces; trivial amount of attached fat 7.6 Thyroid Thyroid 0002046 125 453 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989212 177289 0.96578 0.992271 0.731305 25684 1 76 0.00294712 273 0 1.03256e+08 0.0339318 460063 1.0406e+08 1.36737e+07 25743 5.13595e+07 0 0.234475 0.992271 0.725653 1.03256e+08 0.00438717 2.25035e+07 9.96528e+06 2.26884e+07 264 2.27717e+07 1.52066e+07 0.00366493 2.27116e+07 49.9339 0.00442112 0.99533 0 50.2045 GTEX-1GL5R-0726-SM-9MQL5 1 B1 2 pieces; mature fat 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 132 446 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986241 306858 0.979055 0.988463 0.869825 21830 1 76 0.00550098 137 0 6.23841e+07 0.0206064 419445 6.31123e+07 7.53042e+06 21839 3.10405e+07 0 0.10923 0.988463 0.859789 6.23841e+07 0.0072963 1.37136e+07 5.67404e+06 1.38486e+07 148 1.38538e+07 1.13604e+07 0.00639662 1.38419e+07 49.9785 0.00664601 0.990684 0 50.2449 GTEX-1GL5R-0826-SM-9KNTS 0 B1 2 pieces; thickening of the basement membrane and focal hyalinization of tubules, reduced spermatogenesis 7.3 Testis Testis 0000473 137 441 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992291 317826 0.939698 0.993355 0.686316 33630 1 76 0.00276864 274 0 1.06696e+08 0.0600354 1.57404e+06 1.0741e+08 1.20347e+07 33711 5.3178e+07 0 0.253382 0.993355 0.681755 1.06696e+08 0.00338579 2.28743e+07 1.32506e+07 2.29622e+07 258 2.30083e+07 1.44985e+07 0.00307688 2.29323e+07 49.9172 0.0146545 0.994418 0 50.0959 GTEX-1GL5R-0926-SM-9JGFO 1 B1 2 pieces; both include ~30% attached and internal fat 7 Pancreas Pancreas 0001150 138 440 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994467 340039 0.976463 0.995594 0.810475 23691 1 76 0.00226325 267 0 1.34878e+08 0.0233121 637443 1.35475e+08 6.99116e+06 23730 6.72513e+07 0 0.165988 0.995594 0.806904 1.34878e+08 0.00311017 3.06325e+07 3.21906e+07 3.11995e+07 263 3.10274e+07 3.60658e+07 0.00268623 3.09414e+07 49.9307 0.00470526 0.99672 0 50.4586 GTEX-1GL5R-1026-SM-7P8U1 1 B1 2 pieces; attached fat, up to ~10% on 1 piece, cortex and medulla 8.2 Adrenal Gland Adrenal Gland 0002369 139 439 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.965534 261059 0.973201 0.980537 0.787573 24875 1 76 0.00432926 204 0 1.03061e+08 0.0264616 2.13674e+06 1.05107e+08 1.53668e+07 24913 5.06095e+07 0 0.185628 0.980537 0.772244 1.03061e+08 0.00639217 2.23934e+07 1.41413e+07 2.24038e+07 249 2.31515e+07 1.5161e+07 0.00534494 2.31003e+07 49.9447 0.0203292 0.995539 0 50.0116 GTEX-1GL5R-1226-SM-7MXUY 1 B1 2 pieces; mild acute and chronic prostatitis 7.7 Prostate Prostate 0002367 145 433 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.972785 134060 0.966555 0.982633 0.748736 25199 1 76 0.00380733 132 0 7.22066e+07 0.0307404 243456 7.34828e+07 1.16517e+07 25235 3.55742e+07 0 0.217819 0.982633 0.735732 7.22066e+07 0.00489708 1.57626e+07 1.12883e+07 1.57914e+07 145 1.61125e+07 1.11164e+07 0.00434674 1.61133e+07 50.0012 0.0033131 0.992481 0 50.0456 GTEX-1GL5R-1326-SM-7RHHF 0 B1 6 pieces, well trimmed with trivial amount of fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 147 431 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992076 184811 0.970561 0.993971 0.766581 24621 1 76 0.00250461 287 0 1.02346e+08 0.0292044 525305 1.02967e+08 9.59219e+06 24657 5.09772e+07 0 0.20398 0.993971 0.761959 1.02346e+08 0.0039668 2.24057e+07 1.06044e+07 2.26279e+07 289 2.26427e+07 1.5721e+07 0.00323431 2.25752e+07 49.9254 0.00510167 0.995867 0 50.2467 GTEX-1GL5R-1426-SM-7MXUZ 1 B1 6 pieces; target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 159 419 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757,LCSET-7086 04/25/2015 TruSeq.v1 RNASEQ 0.983905 178979 0.974374 0.989874 0.820972 23303 1 76 0.00266098 280 0 9.64567e+07 0.025305 597431 9.74434e+07 1.14502e+07 23332 4.78565e+07 0 0.153402 0.989874 0.812659 9.64567e+07 0.00366872 2.07633e+07 9.8265e+06 2.08937e+07 259 2.10541e+07 1.68052e+07 0.00316181 2.11311e+07 50.0913 0.00613106 0.995843 0 50.1565 GTEX-1GL5R-1526-SM-7MKHO 0 B1 6 pieces; patchy eosinophilic squamous surface (?irritation) 8.9 Esophagus Esophagus - Mucosa 0006920 170 408 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.981296 318976 0.976059 0.987571 0.803115 23495 1 76 0.00388517 170 0 8.20642e+07 0.0234695 355539 8.3097e+07 1.26141e+07 23521 4.0647e+07 0 0.172945 0.987571 0.793133 8.20642e+07 0.00517181 1.82861e+07 1.13907e+07 1.852e+07 181 1.87836e+07 1.56051e+07 0.0045244 1.85224e+07 49.6499 0.0042786 0.993846 0 50.3178 GTEX-1GL5R-1626-SM-9JGGX 0 B1 6 pieces; target muscularis, small attachment of fat/nerve 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 176 402 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993938 422887 0.973568 0.995075 0.808636 23919 1 76 0.00201405 381 0 1.19449e+08 0.0261221 777533 1.2004e+08 5.76337e+06 23956 5.95428e+07 0 0.164932 0.995075 0.804654 1.19449e+08 0.00282633 2.58707e+07 1.02012e+07 2.62342e+07 331 2.61822e+07 2.04583e+07 0.00241973 2.60458e+07 49.8694 0.00647728 0.996213 0 50.3488 GTEX-1GL5R-1726-SM-9KNUX 1 B1 6 pieces; target muscularis 7.6 Colon Colon - Sigmoid 0001159 179 399 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993964 322511 0.976905 0.994976 0.825094 23013 1 76 0.00245504 288 0 1.02491e+08 0.0227383 714762 1.03009e+08 1.11682e+07 23040 5.10923e+07 0 0.151811 0.994976 0.820949 1.02491e+08 0.00330895 2.24048e+07 1.01191e+07 2.25315e+07 274 2.25578e+07 1.83668e+07 0.00288156 2.2477e+07 49.9103 0.00693886 0.995987 0 50.141 GTEX-1GL5R-1826-SM-9KNUY 0 B1 6 pieces; include from 5-10% internal fat, epidermis measures about 34 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 195 383 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992523 308005 0.969523 0.993724 0.770188 24199 1 76 0.00261304 301 0 9.81834e+07 0.0301854 379503 9.88035e+07 1.11656e+07 24236 4.89316e+07 0 0.199334 0.993724 0.765355 9.81834e+07 0.00363435 2.14283e+07 1.1533e+07 2.1548e+07 269 2.16023e+07 1.64699e+07 0.00312308 2.14858e+07 49.8648 0.00384099 0.994925 0 50.1393 GTEX-1GL5R-1926-SM-9WG7U 1 B1 6 pieces; 5 are full thickness, 1 is mucosa/submucosa, basal glandular dilatation 7.7 Stomach Stomach 0000945 179 399 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.988418 241267 0.979508 0.990528 0.826943 23522 1 76 0.00265733 406 0 1.14954e+08 0.0197309 1.30462e+06 1.16053e+08 8.00545e+06 23546 5.72109e+07 0 0.152565 0.990528 0.81911 1.14954e+08 0.00384669 2.61263e+07 7.3123e+07 2.63334e+07 338 2.63179e+07 2.30356e+07 0.00325074 2.63601e+07 50.04 0.0112416 0.992637 0 50.1974 GTEX-1GL5R-2026-SM-7MKHP 1 B1 6 pieces; well trimmed with significant lymphoid component 8.3 Small Intestine Small Intestine - Terminal Ileum 0001211 190 388 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982605 380299 0.963529 0.987718 0.74927 25714 1 76 0.0046718 166 0 8.58715e+07 0.0351468 394104 8.69393e+07 1.28012e+07 25756 4.25083e+07 0 0.214259 0.987718 0.740068 8.58715e+07 0.00537103 1.86915e+07 1.24382e+07 1.90018e+07 175 1.92326e+07 1.35436e+07 0.00501961 1.88765e+07 49.5328 0.0045331 0.992832 0 50.4116 GTEX-1GL5R-2126-SM-9WYTK 1 B1 2 pieces; some intimal thickening/sclerosis 7.2 Blood Vessel Artery - Tibial 0007610 181 397 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993361 188352 0.974938 0.994722 0.792869 21595 1 76 0.00242993 166 0 7.77559e+07 0.0247131 294091 7.81684e+07 5.17235e+06 21626 3.87358e+07 0 0.182069 0.994722 0.788684 7.77559e+07 0.00432156 1.68996e+07 5.58697e+06 1.70501e+07 180 1.70542e+07 1.3399e+07 0.00337445 1.69945e+07 49.9123 0.00376227 0.996083 0 50.2216 GTEX-1GL5R-2226-SM-7SB97 1 B1 2 pieces; include from 40-60% attached fat 5.8 Nerve Nerve - Tibial 0001323 187 391 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6763 04/27/2015 TruSeq.v1 EXCLUDE 0.988733 240591 0.960897 0.991007 0.669288 24901 1 76 0.00288983 148 0 7.77387e+07 0.0389049 431140 7.84441e+07 8.5894e+06 24957 3.86649e+07 0 0.291609 0.991007 0.66327 7.77387e+07 0.00431631 1.6897e+07 9.37601e+06 1.71276e+07 161 1.71318e+07 9.24584e+06 0.00360143 1.70626e+07 49.8989 0.00549614 0.993281 0 50.3388 GTEX-1GL5R-2426-SM-7MXV1 1 B1 6 pieces; mucosa and muscularis, one piece includes ~50% fat, melanosis coli 7.9 Colon Colon - Transverse 0001157 194 384 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976899 146158 0.976761 0.986942 0.847875 22213 1 76 0.00291707 171 0 7.17134e+07 0.0229168 530809 7.26622e+07 1.15148e+07 22226 3.54332e+07 0 0.128886 0.986942 0.836804 7.17134e+07 0.00413277 1.546e+07 7.83579e+06 1.5574e+07 174 1.58397e+07 1.28031e+07 0.00351874 1.58563e+07 50.0261 0.00730516 0.996985 0 50.1838 GTEX-1GL5R-5001-SM-AN46E B1 Heart Heart - Left Ventricle 0006566 105 ChIP-Seq GTEX-1GMR2-0001-SM-EYYWA C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -91 BP-56410 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985104 1.05294e+06 0.968356 0.989577 0.819713 22222 1 76 0.00231585 287 0 1.12058e+08 0.0311641 608702 1.13238e+08 4.28018e+06 22251 5.56286e+07 0 0.148643 0.989577 0.811169 1.12058e+08 0.00363688 2.48166e+07 1.71965e+07 2.50519e+07 279 2.52482e+07 2.67346e+07 0.00297338 2.50982e+07 49.8511 0.00537543 0.99405 0 50.2358 GTEX-1GMR2-0003-SM-7J3B2 C1 Blood Whole Blood 0013756 -91 BP-56398 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GMR2-0003-SM-7MA7E C1 Blood Whole Blood 0013756 -91 BP-56398 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GMR2-0005-SM-ADEH3 C1 8.4 Blood Whole Blood 0013756 -91 BP-56400 RNA isolation_PAXgene Blood RNA (Manual) 09/08/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.942186 458364 0.982975 0.948182 0.815606 16477 1 76 0.00330218 142 0 1.15464e+08 0.0153391 233527 1.21775e+08 1.25376e+07 16483 5.71103e+07 0 0.167369 0.948182 0.773343 1.15464e+08 0.00385105 2.74478e+07 2.04612e+08 2.74723e+07 202 2.77965e+07 3.35529e+07 0.00357488 2.78389e+07 50.0381 0.0019177 0.954178 0 50.0223 GTEX-1GMR2-0008-SM-EAZD1 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 297 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992304 405467 0.982453 0.993539 0.879337 19658 1 76 0.00177683 185 0 8.5048e+07 0.0172804 253481 8.56011e+07 6.23704e+06 19668 4.23786e+07 0 0.103116 0.993539 0.873655 8.5048e+07 0.00289546 1.90201e+07 8.30305e+06 1.91601e+07 199 1.91356e+07 2.17602e+07 0.00233545 1.9149e+07 50.0174 0.00296119 0.994774 0 50.1835 GTEX-1GMR2-0126-SM-9JGHC 1 B1 2 pieces; foci of mild emphysema, no fibrosis 8.2 Lung Lung 0008952 146 715 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994175 261602 0.971384 0.995291 0.789508 25129 1 76 0.00213317 278 0 1.15708e+08 0.028271 579744 1.16255e+08 5.58036e+06 25168 5.76869e+07 0 0.181876 0.995291 0.78579 1.15708e+08 0.00307194 2.55407e+07 9.44555e+06 2.58149e+07 324 2.57859e+07 1.99968e+07 0.00260203 2.5688e+07 49.905 0.00498683 0.996406 0 50.267 GTEX-1GMR2-0226-SM-9JGHO 1 B1 2 pieces; lobulated fat with minimal fibrous content 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 153 708 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.990109 166928 0.976134 0.991194 0.830085 24592 1 76 0.00213159 284 0 1.3353e+08 0.0235556 1.40811e+06 1.34716e+08 6.89979e+06 24624 6.6599e+07 0 0.146049 0.991194 0.822775 1.3353e+08 0.00281862 2.93372e+07 1.4889e+07 2.97405e+07 328 2.95661e+07 2.27605e+07 0.00247473 2.96374e+07 50.0602 0.0104524 0.992278 0 50.3413 GTEX-1GMR2-0726-SM-7MXVK 1 B1 2 pieces; moderate decrease in mature spermatogenesis 6.6 Testis Testis 0000473 165 696 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975886 198183 0.949855 0.985627 0.760223 30687 1 76 0.00318008 160 0 7.97196e+07 0.0498831 1.21412e+06 8.08821e+07 1.2895e+07 30740 3.93945e+07 0 0.189632 0.985627 0.749296 7.97196e+07 0.00426101 1.71026e+07 1.20124e+07 1.71409e+07 184 1.74383e+07 1.20728e+07 0.0037152 1.75077e+07 50.0992 0.015011 0.995368 0 50.0559 GTEX-1GMR2-0826-SM-7PC3V 1 B1 6 pieces; well trimmed; minimal dermal fat; 2 mm deep apocrine gland in 1 piece [labeled] 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 168 693 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986945 387167 0.97116 0.990411 0.791766 24993 1 76 0.00359821 286 0 1.03449e+08 0.0286614 1.34295e+06 1.04451e+08 1.70353e+07 25036 5.13558e+07 0 0.179394 0.990411 0.784174 1.03449e+08 0.00529192 2.26545e+07 1.25569e+07 2.28752e+07 306 2.29578e+07 1.47613e+07 0.00444211 2.29114e+07 49.9494 0.0128572 0.993877 0 50.2424 GTEX-1GMR2-1026-SM-7MKHJ 1 B1 6 pieces; several lymphoid nodules in well preserved mucosa 6.9 Small Intestine Small Intestine - Terminal Ileum 0001211 175 686 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982535 251132 0.97456 0.988496 0.817917 23246 1 76 0.00435201 138 0 6.72956e+07 0.0248921 947492 6.80787e+07 1.04802e+07 23265 3.33314e+07 0 0.156642 0.988496 0.808508 6.72956e+07 0.00552041 1.48845e+07 9.22188e+06 1.50236e+07 153 1.51327e+07 9.85549e+06 0.00493269 1.51461e+07 50.0222 0.0139176 0.994458 0 50.2327 GTEX-1GMR2-1126-SM-7RHI6 1 B1 6 pieces; minimal plaque; adventitia up to 1 mm thick 7.1 Blood Vessel Artery - Aorta 0001496 180 681 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992099 189652 0.972369 0.994127 0.816813 23111 1 76 0.00252576 278 0 9.5553e+07 0.0272709 405378 9.61175e+07 9.33080e+06 23136 4.75697e+07 0 0.155555 0.994127 0.812016 9.5553e+07 0.00387254 2.07198e+07 7.18124e+06 2.09537e+07 271 2.09268e+07 1.65777e+07 0.00319778 2.09322e+07 50.0064 0.00421753 0.996155 0 50.2807 GTEX-1GMR2-1326-SM-9KNUT 1 B1 2 pieces; minimal fat 8.1 Heart Heart - Atrial Appendage 0006631 187 674 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993955 285567 0.978235 0.995156 0.839265 22435 1 76 0.0026875 268 0 1.14197e+08 0.0214622 2.87924e+06 1.14753e+08 1.32637e+07 22455 5.693e+07 0 0.138969 0.995156 0.8352 1.14197e+08 0.00365974 2.44031e+07 2.18187e+07 2.47409e+07 320 2.44721e+07 1.74853e+07 0.00317303 2.47858e+07 50.3184 0.0250907 0.996357 0 50.3437 GTEX-1GMR2-1426-SM-7RHHK 1 B1 2 pieces; enlarged, distorted nuclei consistent with hypertrophy 7.9 Heart Heart - Left Ventricle 0006566 190 671 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991464 185200 0.984823 0.993918 0.8616 20422 1 76 0.00267978 269 0 1.04432e+08 0.0149533 3.84081e+06 1.05071e+08 9.65394e+06 20433 5.20044e+07 0 0.123223 0.993918 0.85636 1.04432e+08 0.00417176 2.28306e+07 2.58109e+07 2.31286e+07 313 2.3047e+07 1.54148e+07 0.00342393 2.31062e+07 50.0642 0.0365543 0.996372 0 50.3242 GTEX-1GMR2-1526-SM-7MXV6 1 B1 6 pieces; squamous mucosa & submucosa, not muscularis propria (esophagus-mucosa) 8.4 Esophagus Esophagus - Mucosa 0006920 200 661 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975691 101414 0.976247 0.985077 0.836451 22045 1 76 0.00308519 136 0 6.84302e+07 0.0233857 523263 6.94669e+07 9.85146e+06 22060 3.38333e+07 0 0.139796 0.985077 0.823968 6.84302e+07 0.00409231 1.51723e+07 1.14102e+07 1.52665e+07 156 1.55e+07 1.28331e+07 0.00358395 1.55517e+07 50.0832 0.00753256 0.994463 0 50.1547 GTEX-1GMR2-1626-SM-9JGHL 1 B1 6 pieces; muscularis propria 7.6 Esophagus Esophagus - Muscularis 0004648 206 655 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.991598 240169 0.973586 0.993311 0.828241 23754 1 76 0.00353541 203 0 8.17032e+07 0.0261372 892358 8.22534e+07 7.73133e+06 23774 4.06847e+07 0 0.145345 0.993311 0.822701 8.17032e+07 0.00394932 1.75545e+07 7.49387e+06 1.79135e+07 204 1.78502e+07 1.34703e+07 0.00374201 1.77462e+07 49.8539 0.0108489 0.995024 0 50.5061 GTEX-1GMR2-1726-SM-9JGI2 1 B1 2 pieces; muscularis and submucosa, no mucosa [could be used to compare to sigmoid colon] 8.5 Colon Colon - Transverse 0001157 207 654 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994334 228745 0.974597 0.995418 0.825703 23749 1 76 0.00199597 383 0 1.25728e+08 0.0251087 946321 1.26307e+08 6.53603e+06 23781 6.26984e+07 0 0.148894 0.995418 0.82192 1.25728e+08 0.00288214 2.72341e+07 1.09349e+07 2.75933e+07 331 2.7486e+07 2.29607e+07 0.00243857 2.74678e+07 49.9834 0.00749222 0.996502 0 50.3276 GTEX-1GMR2-1826-SM-9KNUP 1 B1 6 pieces; well trimmed muscularis propria 6.5 Colon Colon - Sigmoid 0001159 214 647 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993218 241076 0.971093 0.99431 0.797065 23786 1 76 0.002744 282 0 9.9014e+07 0.028627 1.0758e+06 9.95806e+07 1.2226e+07 23817 4.93558e+07 0 0.174028 0.99431 0.79253 9.9014e+07 0.00338523 2.14662e+07 1.00617e+07 2.17428e+07 271 2.17155e+07 1.55693e+07 0.00306426 2.15928e+07 49.8583 0.0108033 0.995402 0 50.32 GTEX-1GMR2-1926-SM-9MQLZ 1 B1 2 pieces; gynecomastoid changes 6.1 Breast Breast - Mammary Tissue 0008367 217 644 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985325 188580 0.970195 0.987333 0.788846 23595 1 76 0.0055852 143 0 7.14343e+07 0.0296003 900200 7.23508e+07 8.31927e+06 23622 3.55535e+07 0 0.181349 0.987333 0.778854 7.14343e+07 0.00705189 1.55542e+07 7.48776e+06 1.58376e+07 157 1.5807e+07 9.97395e+06 0.00631706 1.57151e+07 49.8544 0.0124422 0.989342 0 50.4513 GTEX-1GMR2-2026-SM-7MKHK 1 B1 3 pieces; well dissected glands; focal atrophy with ductal dilatation; small focus of skeletal muscle 7.3 Salivary Gland Minor Salivary Gland 0006330 219 642 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.982477 351330 0.969323 0.98709 0.784425 25164 1 76 0.00482752 209 0 8.76397e+07 0.0285841 425074 8.8786e+07 1.34255e+07 25194 4.33758e+07 0 0.184897 0.98709 0.774298 8.76397e+07 0.00551351 1.93892e+07 1.61049e+07 1.97023e+07 213 1.98723e+07 1.36559e+07 0.00516891 1.96044e+07 49.6606 0.00478763 0.991702 0 50.4005 GTEX-1GMR2-2126-SM-7P8TX 1 B1 2 pieces; 10% internal fat 7.5 Muscle Muscle - Skeletal 0011907 292 569 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.947157 327790 0.981797 0.971294 0.873704 21113 1 76 0.00411234 275 0 9.78782e+07 0.0179716 1.3848e+06 1.00771e+08 1.54696e+07 21126 4.76066e+07 0 0.108093 0.971294 0.848624 9.78782e+07 0.0080671 2.08564e+07 1.64196e+07 2.04713e+07 259 2.161e+07 1.84751e+07 0.00604058 2.19251e+07 50.362 0.013742 0.995432 0 49.5341 GTEX-1GMR2-2326-SM-7PC18 1 B1 2 pieces; 1 with no external fat; other with 20% external fat 6.5 Nerve Nerve - Tibial 0001323 302 559 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.988918 158908 0.966982 0.99196 0.75443 24600 1 76 0.00304306 219 0 9.16573e+07 0.0327455 381442 9.24002e+07 1.19395e+07 24644 4.55733e+07 0 0.212552 0.99196 0.748365 9.16573e+07 0.00452387 2.00257e+07 7.91088e+06 2.01965e+07 218 2.0226e+07 1.37185e+07 0.0037812 2.02605e+07 50.0427 0.00412815 0.995002 0 50.2124 GTEX-1GMR2-2426-SM-9MQM2 1 B1 2 pieces; 1 piece fragmented; minimal plaque 7.5 Blood Vessel Artery - Tibial 0007610 306 555 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985986 360739 0.975537 0.988198 0.847788 20788 1 76 0.00549432 135 0 6.75955e+07 0.0240987 307086 6.84028e+07 8.14232e+06 20803 3.36259e+07 0 0.127749 0.988198 0.837782 6.75955e+07 0.00726553 1.45044e+07 5.09567e+06 1.46328e+07 147 1.46102e+07 1.28804e+07 0.00637794 1.4669e+07 50.1003 0.00448938 0.990409 0 50.2202 GTEX-1GMR2-2526-SM-9MQKW 1 B1 2 pieces; 20% internal fibrous content in 1 piece; 5% in other 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 308 553 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985468 272971 0.975376 0.987704 0.801862 21978 1 76 0.00574079 131 0 6.43534e+07 0.0243954 269184 6.51545e+07 8.04367e+06 21995 3.20228e+07 0 0.173514 0.987704 0.792002 6.43534e+07 0.00712683 1.40182e+07 6.64028e+06 1.42588e+07 137 1.42534e+07 1.1039e+07 0.00643224 1.41649e+07 49.8445 0.00413147 0.98994 0 50.4255 GTEX-1GMR2-5001-SM-AN476 B1 Lung Lung 0008952 296 ChIP-Seq GTEX-1GMR3-0001-SM-7J3AM B1 Blood Whole Blood 0013756 -253 BP-56398 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GMR3-0001-SM-7MA6Y B1 Blood Whole Blood 0013756 -253 BP-56398 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GMR3-0004-SM-EVR3D B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -253 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990104 952991 0.969753 0.992081 0.797154 23427 1 76 0.00229716 288 0 1.31935e+08 0.029508 653212 1.32988e+08 9.93523e+06 23483 6.5655e+07 0 0.172599 0.992081 0.790841 1.31935e+08 0.00351408 2.93712e+07 1.75548e+07 2.95614e+07 309 2.96305e+07 3.06181e+07 0.00290441 2.95483e+07 49.9306 0.00491181 0.994058 0 50.1614 GTEX-1GMR3-0005-SM-ADEGR B1 9.2 Blood Whole Blood 0013756 -253 BP-56400 RNA isolation_PAXgene Blood RNA (Manual) 09/08/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.977911 835266 0.961994 0.984291 0.791432 20421 1 76 0.00343187 161 0 9.51317e+07 0.0373199 212784 9.66499e+07 1.04841e+07 20439 4.71041e+07 0 0.170562 0.984291 0.779 9.51317e+07 0.00348994 2.12651e+07 8.61157e+07 2.14616e+07 174 2.17801e+07 2.2047e+07 0.00346071 2.15146e+07 49.6933 0.0022016 0.990672 0 50.23 GTEX-1GMR3-0008-SM-EAZD2 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 290 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993452 464801 0.984354 0.994363 0.870291 21230 1 76 0.00167639 288 0 1.17212e+08 0.015323 205836 1.17876e+08 8.84055e+06 21251 5.84375e+07 0 0.114063 0.994363 0.865385 1.17212e+08 0.00258055 2.64152e+07 1.01112e+07 2.65644e+07 298 2.65734e+07 3.19884e+07 0.00212805 2.65064e+07 49.9369 0.0017462 0.995274 0 50.1408 GTEX-1GMR3-0126-SM-A9SLW 0 B1 6 pieces, no significant dermal fat; squamous epithelium is 40-50 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 245 785 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988571 362393 0.97384 0.990305 0.742749 25268 1 76 0.00656402 183 0 9.68621e+07 0.0258739 623681 9.78104e+07 1.70406e+07 25317 4.82073e+07 0 0.23109 0.990305 0.735548 9.68621e+07 0.00811554 2.13841e+07 1.10993e+07 2.15713e+07 181 2.16269e+07 1.55763e+07 0.00733842 2.14893e+07 49.8405 0.00637643 0.992039 0 50.2179 GTEX-1GMR3-0226-SM-7RHIB 1 B1 2 pieces, mild congestion 7.5 Lung Lung 0008952 247 783 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992123 234443 0.975484 0.993987 0.737208 24972 1 76 0.00262941 274 0 1.15359e+08 0.0241251 354015 1.16057e+08 1.07528e+07 25021 5.74263e+07 0 0.238277 0.993987 0.732775 1.15359e+08 0.00372234 2.56282e+07 1.25776e+07 2.57303e+07 319 2.57821e+07 1.70416e+07 0.00317485 2.57867e+07 50.0044 0.00305036 0.99585 0 50.0994 GTEX-1GMR3-0326-SM-7P8QT 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 7.8 Heart Heart - Left Ventricle 0006566 253 777 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.99249 303798 0.981242 0.994467 0.837007 21274 1 76 0.00276946 196 0 9.2074e+07 0.0185145 2.2388e+06 9.25863e+07 1.30162e+07 21295 4.58538e+07 0 0.144235 0.994467 0.832376 9.2074e+07 0.00374829 2.02632e+07 1.03269e+07 2.06483e+07 253 2.07666e+07 1.63461e+07 0.0032579 2.03061e+07 49.4394 0.0241807 0.996444 0 50.4708 GTEX-1GMR3-0426-SM-7PC17 1 B1 2 pieces, no abnormalities 7.3 Heart Heart - Atrial Appendage 0006631 255 775 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.990323 198270 0.98015 0.993355 0.801763 22709 1 76 0.00274637 271 0 1.16059e+08 0.0192136 2.00615e+06 1.16835e+08 1.50066e+07 22738 5.77186e+07 0 0.178387 0.993355 0.796436 1.16059e+08 0.00415842 2.52306e+07 1.67825e+07 2.53485e+07 314 2.53919e+07 1.92889e+07 0.00345024 2.54883e+07 50.0947 0.0171708 0.996387 0 50.1166 GTEX-1GMR3-0526-SM-9YFLI 1 B1 6 pieces, minimal atherosis 7.5 Blood Vessel Artery - Aorta 0001496 255 775 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992927 240594 0.975283 0.994505 0.824167 21982 1 76 0.00236702 277 0 9.59921e+07 0.0242897 247109 9.65225e+07 3.56336e+06 22009 4.78081e+07 0 0.151116 0.994505 0.819638 9.59921e+07 0.00345693 2.06293e+07 7.38616e+06 2.08321e+07 263 2.08398e+07 1.89665e+07 0.00291111 2.07717e+07 49.9181 0.00256012 0.996083 0 50.2445 GTEX-1GMR3-0626-SM-9WYT3 1 B1 2 pieces, adherent nubbins of fat up to ~0.5mm, rep. delineated 9 Blood Vessel Artery - Coronary 0001621 258 772 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993301 288678 0.977349 0.994765 0.825473 21809 1 76 0.00231831 277 0 1.04166e+08 0.0222401 196603 1.04714e+08 7.11082e+06 21832 5.18926e+07 0 0.151875 0.994765 0.821152 1.04166e+08 0.00404046 2.25963e+07 7.79947e+06 2.27652e+07 274 2.27953e+07 2.14833e+07 0.00317812 2.27139e+07 49.9106 0.00187752 0.996229 0 50.1862 GTEX-1GMR3-0726-SM-9WPOF 1 B1 2 pieces, no abnormalities; nubbin of adherent fat up to ~1mm, delineated. 6.9 Thyroid Thyroid 0002046 260 770 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986849 223376 0.970474 0.988721 0.720453 24410 1 76 0.00639255 130 0 7.80245e+07 0.0292147 281875 7.89145e+07 1.2486e+07 24459 3.88353e+07 0 0.250021 0.988721 0.712327 7.80245e+07 0.00685889 1.72304e+07 7.48339e+06 1.73048e+07 141 1.73663e+07 1.19151e+07 0.00662528 1.73072e+07 49.9147 0.0035719 0.990593 0 50.1077 GTEX-1GMR3-0826-SM-9WYT4 1 B1 2 pieces, no abnormalities; fascia/vascular elements are ~5-10% of tissue (rep delineated) 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 262 768 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99316 229334 0.978119 0.994666 0.792751 23732 1 76 0.00247466 275 0 9.36972e+07 0.021517 455399 9.41996e+07 6.53247e+06 23764 4.66795e+07 0 0.185369 0.994666 0.788523 9.36972e+07 0.00429582 2.07282e+07 9.16963e+06 2.09315e+07 266 2.09736e+07 1.6399e+07 0.00338386 2.08226e+07 49.8194 0.0048344 0.996173 0 50.244 GTEX-1GMR3-0926-SM-9WPP9 2 B1 2 pieces, all cortex, trace adherent fat, delineated 6.8 Adrenal Gland Adrenal Gland 0002369 263 767 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988874 164978 0.973302 0.990532 0.775949 20586 1 76 0.00634132 110 0 5.62082e+07 0.026506 1.29223e+06 5.67455e+07 8.9467e+06 20602 2.7987e+07 0 0.197353 0.990532 0.768602 5.62082e+07 0.00721477 1.20202e+07 8.57788e+06 1.22326e+07 130 1.22253e+07 5.64124e+06 0.00677732 1.21078e+07 49.7586 0.0227724 0.99219 0 50.4379 GTEX-1GMR3-1226-SM-7MGY1 2 B1 2 pieces, moderate advanced saponification. Islets visible, rep, encircled, early degenerative changes 5.7 Pancreas Pancreas 0001150 269 761 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.991625 179995 0.98168 0.993884 0.841886 20264 1 76 0.0026052 90 0 7.30138e+07 0.0180986 324634 7.34631e+07 5.64221e+06 20275 3.63623e+07 0 0.139793 0.993884 0.836738 7.30138e+07 0.00360506 1.68474e+07 2.05889e+07 1.70988e+07 108 1.70854e+07 2.24387e+07 0.00310399 1.7026e+07 49.9129 0.00441901 0.996144 0 50.3703 GTEX-1GMR3-1326-SM-7P8TB 1 B1 6 pieces, confirmed target muscularis 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 279 751 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.925734 339309 0.968732 0.96004 0.77414 24118 1 76 0.00422272 137 0 8.02334e+07 0.0310202 640701 8.3573e+07 1.27984e+07 24143 3.85464e+07 0 0.194592 0.96004 0.743206 8.02334e+07 0.00951131 1.665e+07 8.73979e+06 1.67761e+07 158 1.81411e+07 1.22468e+07 0.00677252 1.79606e+07 49.75 0.00766636 0.994346 0 50.1886 GTEX-1GMR3-1426-SM-7PC16 1 B1 6 pieces, confirmed target muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 280 750 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.987407 227118 0.971401 0.99137 0.772618 23538 1 76 0.00290675 207 0 9.44732e+07 0.0283238 639481 9.52956e+07 1.3217e+07 23570 4.69284e+07 0 0.198783 0.99137 0.765951 9.44732e+07 0.00485688 2.02165e+07 8.45165e+06 2.04005e+07 251 2.05194e+07 1.50778e+07 0.00387792 2.04432e+07 49.907 0.0067105 0.995333 0 50.2265 GTEX-1GMR3-1526-SM-9JGGL 1 B1 6 pieces, squamous mucosa is ~0.5mm, ~50-60% thickness. 7.1 Esophagus Esophagus - Mucosa 0006920 281 749 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994061 281405 0.973404 0.995104 0.761443 24037 1 76 0.00217994 280 0 1.2332e+08 0.0262866 550741 1.23927e+08 6.44488e+06 24073 6.1495e+07 0 0.211961 0.995104 0.757715 1.2332e+08 0.00298671 2.7592e+07 1.74163e+07 2.78223e+07 317 2.78414e+07 2.16832e+07 0.00258291 2.76991e+07 49.8719 0.00444408 0.996148 0 50.2078 GTEX-1GMR3-1726-SM-9JGGQ 1 B1 2 pieces, spermatogenesis appears reduced. 6 Testis Testis 0000473 285 745 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.99215 457023 0.936502 0.993521 0.711903 34501 1 76 0.00204449 287 0 1.27977e+08 0.0631846 1.36165e+06 1.28812e+08 6.32599e+06 34597 6.37736e+07 0 0.2246 0.993521 0.70729 1.27977e+08 0.00310468 2.7102e+07 1.49329e+07 2.72699e+07 328 2.73303e+07 1.9347e+07 0.00257385 2.71941e+07 49.8751 0.0105708 0.994892 0 50.1543 GTEX-1GMR3-1926-SM-9KNUZ 0 B1 6 pieces trace dermal fat (delineated); squamous epithelium is ~40-50 microns 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 290 740 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993713 356158 0.973842 0.99461 0.802143 23600 1 76 0.00256768 305 0 1.09032e+08 0.0258099 566695 1.09623e+08 1.24238e+07 23636 5.43541e+07 0 0.171699 0.99461 0.797819 1.09032e+08 0.00309169 2.36546e+07 1.44712e+07 2.38313e+07 293 2.38621e+07 1.98651e+07 0.00282945 2.37188e+07 49.8494 0.00516949 0.995508 0 50.1861 GTEX-1GMR3-2026-SM-9MQLG 0 B1 2 pieces, fascia/vascular elements are ~10-20% of tissue (rep delineated) 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 292 738 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985573 162750 0.977816 0.987531 0.811252 22820 1 76 0.0054858 138 0 6.83407e+07 0.0218203 548131 6.92036e+07 7.91698e+06 22845 3.40243e+07 0 0.166564 0.987531 0.801137 6.83407e+07 0.00683222 1.4969e+07 6.83386e+06 1.51909e+07 149 1.5204e+07 1.12606e+07 0.00615767 1.50851e+07 49.8037 0.00792056 0.98949 0 50.3679 GTEX-1GMR3-2126-SM-9WYTZ 0 B1 2 pieces, interstitial fat/vascular elements are 10-15% of tissue 8.5 Muscle Muscle - Skeletal 0011907 294 736 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.995343 196455 0.984742 0.996349 0.868675 19316 1 76 0.00204684 270 0 9.12578e+07 0.0150663 1.05055e+06 9.15922e+07 5.82166e+06 19331 4.55168e+07 0 0.116067 0.996349 0.865504 9.12578e+07 0.00386475 1.99084e+07 9.34415e+06 2.0156e+07 262 2.01386e+07 1.90642e+07 0.00295488 2.00001e+07 49.8274 0.0114699 0.997355 0 50.309 GTEX-1GMR3-2226-SM-9YFT6 0 B1 2 pieces, minute nubbins of adherent fat 7.3 Nerve Nerve - Tibial 0001323 295 735 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.992461 287327 0.96546 0.993905 0.690144 24677 1 76 0.00259314 214 0 9.04304e+07 0.0342786 366713 9.0985e+07 5.73669e+06 24739 4.50418e+07 0 0.275316 0.993905 0.685937 9.04304e+07 0.00338212 1.98802e+07 7.85424e+06 1.9999e+07 203 2.00173e+07 1.20442e+07 0.00298706 1.99868e+07 49.9618 0.00403048 0.995349 0 50.1488 GTEX-1GMR3-2326-SM-7SB94 0 B1 2 pieces, rim of adherent fascia up to ~1mm; no atherosis 7.9 Blood Vessel Artery - Tibial 0007610 298 732 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989824 308424 0.964609 0.992085 0.734022 22654 1 76 0.00277314 173 0 8.86612e+07 0.0349633 331102 8.93685e+07 1.02604e+07 22694 4.40907e+07 0 0.230588 0.992085 0.728212 8.86612e+07 0.00420911 1.88916e+07 1.11269e+07 1.91119e+07 183 1.91579e+07 1.50351e+07 0.00348949 1.90374e+07 49.8423 0.00370491 0.994347 0 50.2898 GTEX-1GMR3-2426-SM-7MXV2 1 B1 6 pieces, glomeruli present; tubules mildy autolyzed 5.6 Kidney Kidney - Cortex 0001225 301 729 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.97458 88661 0.978855 0.984896 0.801159 21629 1 76 0.00294734 149 0 6.18472e+07 0.0209905 2.20787e+06 6.27957e+07 9.96602e+06 21642 3.0555e+07 0 0.177697 0.984896 0.789058 6.18472e+07 0.00415796 1.35084e+07 2.03613e+07 1.35354e+07 167 1.37865e+07 5.59458e+06 0.00354631 1.37936e+07 50.0129 0.0351596 0.995212 0 50.0498 GTEX-1GMR3-2526-SM-7P8QS 1 B1 6 pieces, confirmed target muscularis; focal trace mucosa, delineated 6.5 Colon Colon - Sigmoid 0001159 306 724 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991403 321747 0.972493 0.993229 0.779038 24122 1 76 0.00304165 276 0 1.06494e+08 0.0272235 765997 1.0722e+08 1.50838e+07 24159 5.30207e+07 0 0.193455 0.993229 0.773764 1.06494e+08 0.00381224 2.28948e+07 1.05505e+07 2.3315e+07 269 2.33678e+07 1.64691e+07 0.00342624 2.30203e+07 49.6254 0.00714419 0.995056 0 50.4546 GTEX-1GMR3-2626-SM-7RHHG 1 B1 2 pieces, prominent gynecomastoid ductal (rep encircled) and stromal hyperplasia 7 Breast Breast - Mammary Tissue 0008367 304 726 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992124 187339 0.971811 0.993825 0.723098 25406 1 76 0.00252082 209 0 9.8231e+07 0.0278199 561175 9.88414e+07 8.85729e+06 25461 4.89096e+07 0 0.248713 0.993825 0.718633 9.8231e+07 0.00382113 2.16653e+07 8.4748e+06 2.18175e+07 246 2.18281e+07 1.43147e+07 0.00316986 2.18138e+07 49.9836 0.00567753 0.995526 0 50.175 GTEX-1GMR3-2726-SM-7MKFB 1 B1 6 pieces, abundant lymphoid aggregates are ~60-70% of tissue 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 310 720 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.983365 418821 0.963982 0.988577 0.690716 26171 1 76 0.00417789 207 0 1.03576e+08 0.0356044 574420 1.04772e+08 1.55794e+07 26234 5.1311e+07 0 0.273266 0.988577 0.682826 1.03576e+08 0.00526956 2.24611e+07 1.25665e+07 2.28607e+07 227 2.31617e+07 1.43885e+07 0.00472085 2.26778e+07 49.4722 0.00548255 0.993788 0 50.4408 GTEX-1GMR3-2826-SM-9WPOG 2 B1 6 pieces, target mucosa is ~0.5mm, ~20% thickness; deeper (basal) mucosa better preserved (score 1) 7 Colon Colon - Transverse 0001157 311 719 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985617 226820 0.972031 0.987423 0.765991 24442 1 76 0.0069153 142 0 7.57571e+07 0.0261086 717803 7.67221e+07 1.2315e+07 24474 3.76394e+07 0 0.20604 0.987423 0.756357 7.57571e+07 0.00760836 1.66525e+07 9.35193e+06 1.67756e+07 146 1.68383e+07 1.158e+07 0.0072612 1.67161e+07 49.8179 0.00935589 0.989229 0 50.1842 GTEX-1GMR3-5001-SM-AN46H B1 Lung Lung 0008952 249 ChIP-Seq GTEX-1GMR3-5019-SM-AN46K B1 Muscle Muscle - Skeletal 0011907 294 ChIP-Seq GTEX-1GMR8-0001-SM-EVR3E B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 711 BP-57229 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990722 763462 0.974357 0.992723 0.796978 23377 1 76 0.00233965 293 0 1.4796e+08 0.0248137 972537 1.49045e+08 1.10781e+07 23435 7.36279e+07 0 0.177379 0.992723 0.791179 1.4796e+08 0.003241 3.30557e+07 1.75334e+07 3.32918e+07 321 3.33481e+07 3.41448e+07 0.00278942 3.3281e+07 49.9497 0.00652512 0.994725 0 50.1779 GTEX-1GMR8-0003-SM-7J38N B1 Blood Whole Blood 0013756 711 BP-56478 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GMR8-0003-SM-7MA65 B1 Blood Whole Blood 0013756 711 BP-56478 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GMR8-0005-SM-ARZL2 B1 9.1 Blood Whole Blood 0013756 711 BP-56504 RNA isolation_PAXgene Blood RNA (Manual) 09/12/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.97098 2.30286e+06 0.890103 0.973807 0.680178 16042 1 76 0.00253349 82 0 6.65038e+07 0.109345 133375 6.82926e+07 2.67295e+06 16046 3.29001e+07 0 0.209925 0.973807 0.662362 6.65038e+07 0.0038665 1.40603e+07 1.38496e+08 1.44005e+07 110 1.46605e+07 1.58226e+07 0.00319806 1.40317e+07 48.9042 0.00195299 0.976633 0 50.5976 GTEX-1GMR8-0008-SM-EAZD3 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 725 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993258 476126 0.984053 0.99422 0.868457 21349 1 76 0.00169338 293 0 1.23098e+08 0.0156309 294814 1.23814e+08 9.53835e+06 21372 6.13706e+07 0 0.115596 0.99422 0.863437 1.23098e+08 0.00262751 2.76884e+07 1.11004e+07 2.79005e+07 317 2.79221e+07 3.34632e+07 0.00216 2.7781e+07 49.8734 0.0023811 0.995181 0 50.1908 GTEX-1GMR8-0011-R10a-SM-CJI21 B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 722 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993123 998405 0.964515 0.994469 0.855286 23111 1 76 0.00187265 373 0 8.76231e+07 0.0351162 4.50814e+06 8.81104e+07 5.29163e+06 23128 4.36258e+07 0 0.109229 0.994469 0.850556 8.76231e+07 0.00230655 1.91335e+07 1.38883e+07 1.94622e+07 342 1.94648e+07 1.12839e+07 0.00208931 1.92276e+07 49.6935 0.0511646 0.995815 0 50.4258 GTEX-1GMR8-0011-R11b-SM-9OSX2 B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 722 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990879 372349 0.951182 0.993133 0.782704 23385 1 76 0.00256066 270 0 8.73576e+07 0.0485088 2.04074e+06 8.79617e+07 8.34032e+06 23412 4.34711e+07 0 0.168478 0.993133 0.777329 8.73576e+07 0.00367462 1.88516e+07 1.2065e+07 1.90589e+07 264 1.90995e+07 9.78827e+06 0.00311637 1.89859e+07 49.8508 0.0232004 0.995386 0 50.2734 GTEX-1GMR8-0011-R1b-SM-CJI2O B1, A1 5.6 Brain Brain - Hippocampus 0001954 722 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992316 1.01014e+06 0.966682 0.994041 0.857502 22566 1 76 0.0018185 371 0 1.01036e+08 0.0330704 1.02773e+07 1.01641e+08 5.72143e+06 22581 5.02792e+07 0 0.109181 0.994041 0.852392 1.01036e+08 0.00265898 2.19511e+07 3.00021e+07 2.25099e+07 392 2.25076e+07 9.97814e+06 0.00223801 2.2091e+07 49.533 0.101113 0.995766 0 50.6284 GTEX-1GMR8-0011-R2a-SM-CE6RD B1, A1 5.8 Brain Brain - Substantia nigra 0002038 722 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.990334 579187 0.963159 0.992423 0.842346 22635 1 76 0.00528192 373 0 9.3808e+07 0.0366863 9.55854e+06 9.45242e+07 1.3975e+07 22648 4.66948e+07 0 0.120813 0.992423 0.835963 9.3808e+07 0.00599289 2.05183e+07 3.02376e+07 2.07724e+07 349 2.06216e+07 6.99854e+06 0.00563665 2.08221e+07 50.2418 0.101123 0.994512 0 50.3076 GTEX-1GMR8-0011-R3b-SM-9QEIG B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 722 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990409 545246 0.964113 0.993556 0.856954 23941 1 76 0.00163914 373 0 1.16461e+08 0.0355798 6.90513e+06 1.17216e+08 5.44806e+06 23963 5.79405e+07 0 0.107159 0.993556 0.851432 1.16461e+08 0.00383566 2.53921e+07 2.30586e+07 2.56661e+07 340 2.56364e+07 1.2761e+07 0.00273392 2.57279e+07 50.0891 0.0589095 0.996704 0 50.2683 GTEX-1GMR8-0011-R4a-SM-9OSX1 B1, A1 6.2 Brain Brain - Amygdala 0001876 722 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99333 404045 0.966327 0.995222 0.855272 22156 1 76 0.00231296 267 0 9.16672e+07 0.0334399 7.90964e+06 9.21074e+07 8.67242e+06 22167 4.56644e+07 0 0.111055 0.995222 0.851185 9.16672e+07 0.00325428 1.99184e+07 2.87934e+07 2.02713e+07 320 2.01281e+07 7.63295e+06 0.00278272 2.01933e+07 50.0808 0.0858741 0.997113 0 50.4391 GTEX-1GMR8-0011-R5b-SM-9QEIH B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 722 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990257 451976 0.963152 0.99353 0.835647 23597 1 76 0.00171093 270 0 1.0056e+08 0.0365976 7.35135e+06 1.01215e+08 5.0596e+06 23612 5.00294e+07 0 0.127504 0.99353 0.83024 1.0056e+08 0.00364808 2.17493e+07 2.62815e+07 2.21331e+07 326 2.20645e+07 9.503e+06 0.00267631 2.20898e+07 50.0286 0.0726309 0.996803 0 50.4374 GTEX-1GMR8-0011-R6b-SM-CE6RC B1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 722 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989277 526893 0.955251 0.990883 0.825882 23070 1 76 0.00771758 144 0 6.59037e+07 0.0445371 5.42135e+06 6.65101e+07 1.02984e+07 23085 3.27949e+07 0 0.129369 0.990883 0.818352 6.59037e+07 0.00735465 1.42783e+07 1.58845e+07 1.44951e+07 165 1.45017e+07 6.32802e+06 0.0075364 1.43703e+07 49.7725 0.0815117 0.992489 0 50.3767 GTEX-1GMR8-0011-R7b-SM-CJI2I B1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 722 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.9913 954185 0.961967 0.993094 0.829644 22114 1 76 0.00187452 369 0 8.84539e+07 0.0378883 1.0418e+07 8.9069e+07 5.43735e+06 22126 4.40073e+07 0 0.132322 0.993094 0.823914 8.84539e+07 0.00251197 1.8737e+07 3.3666e+07 1.97249e+07 381 1.94497e+07 6.46566e+06 0.00219267 1.91425e+07 49.602 0.116966 0.994888 0 51.2843 GTEX-1GMR8-0011-R8a-SM-CKZNX B1, A1 6.5 Brain Brain - Hypothalamus 0001898 722 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990827 687684 0.961627 0.99357 0.851299 23775 1 76 0.00195039 271 0 8.07111e+07 0.0380998 4.83305e+06 8.12335e+07 8.17802e+06 23793 4.01484e+07 0 0.110328 0.99357 0.845825 8.07111e+07 0.00352065 1.76614e+07 1.40736e+07 1.79908e+07 285 1.80385e+07 9.63773e+06 0.00273335 1.78127e+07 49.6851 0.0594958 0.996313 0 50.462 GTEX-1GMR8-0126-SM-9WYTM 1 B1 6 pieces; well trimmed; 20% dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 726 471 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993432 236737 0.974232 0.994682 0.780952 23480 1 76 0.00253993 241 0 8.69276e+07 0.0254771 447595 8.73923e+07 6.17595e+06 23517 4.33214e+07 0 0.19328 0.994682 0.7768 8.69276e+07 0.00413424 1.89433e+07 8.72063e+06 1.91027e+07 220 1.91084e+07 1.50676e+07 0.00333608 1.9041e+07 49.9116 0.00512167 0.995933 0 50.2095 GTEX-1GMR8-0226-SM-9YFL3 1 B1 2 pieces; 5% fibrous content 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 727 470 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.993824 231748 0.976119 0.995142 0.810793 22596 1 76 0.00246728 210 0 8.59727e+07 0.0235507 752360 8.63924e+07 5.24164e+06 22619 4.28427e+07 0 0.165326 0.995142 0.806854 8.59727e+07 0.00331876 1.8947e+07 8.36402e+06 1.90554e+07 228 1.90686e+07 1.43329e+07 0.00289246 1.90475e+07 49.9723 0.00870863 0.99646 0 50.1426 GTEX-1GMR8-0326-SM-9KNUO 0 B1 2 pieces; 10% internal fat; tendon in 1 piece, 10% area [labeled] 8.1 Muscle Muscle - Skeletal 0011907 728 469 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993723 237254 0.979687 0.994888 0.843967 21120 1 76 0.00218716 277 0 1.0573e+08 0.0201081 1.34485e+06 1.06273e+08 1.1595e+07 21138 5.27196e+07 0 0.13572 0.994888 0.839652 1.0573e+08 0.00326538 2.29429e+07 1.2098e+07 2.30212e+07 296 2.30196e+07 2.06409e+07 0.00272564 2.30532e+07 50.0364 0.0126547 0.996052 0 50.0851 GTEX-1GMR8-0426-SM-9MQJZ 1 B1 2 pieces; 20% internal fat 7.5 Nerve Nerve - Tibial 0001323 729 468 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.987992 329221 0.968427 0.990127 0.744207 24452 1 76 0.00399015 228 0 9.32941e+07 0.031267 353679 9.42244e+07 7.86323e+06 24490 4.64309e+07 0 0.22422 0.990127 0.736859 9.32941e+07 0.00498434 2.05497e+07 8.78691e+06 2.06714e+07 220 2.07194e+07 1.48632e+07 0.00448617 2.0688e+07 49.962 0.00375358 0.992261 0 50.1476 GTEX-1GMR8-0526-SM-7SB8Y 1 B1 2 pieces; well trimmed; no plaque 6.9 Blood Vessel Artery - Tibial 0007610 731 466 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.991331 152654 0.972829 0.993206 0.792945 21858 1 76 0.00265071 170 0 8.58145e+07 0.0268151 571705 8.64015e+07 9.2938e+06 21885 4.26903e+07 0 0.179885 0.993206 0.787558 8.58145e+07 0.00403146 1.84573e+07 8.24237e+06 1.86264e+07 201 1.86072e+07 1.50795e+07 0.00333978 1.86354e+07 50.0378 0.00661684 0.995082 0 50.2281 GTEX-1GMR8-0626-SM-7RHI7 1 B1 2 pieces; abundant untrimmed subcutaneous fat up to 2 mm thick 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 732 465 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990738 146396 0.974882 0.99318 0.768504 24180 1 76 0.0024487 287 0 1.00437e+08 0.0248769 521814 1.01126e+08 9.34718e+06 24219 4.9994e+07 0 0.206378 0.99318 0.763263 1.00437e+08 0.00381573 2.1975e+07 1.01391e+07 2.21676e+07 278 2.22177e+07 1.66445e+07 0.00313054 2.21588e+07 49.9336 0.00516002 0.995623 0 50.2181 GTEX-1GMR8-0726-SM-9KNVI 1 B1 2 pieces; atrophic ductal and lobular units; dense fibrosis 7.1 Breast Breast - Mammary Tissue 0008367 737 460 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992443 243363 0.966242 0.993842 0.680162 26317 1 76 0.00272634 212 0 9.97629e+07 0.0334373 474526 1.00381e+08 1.14276e+07 26388 4.96907e+07 0 0.28608 0.993842 0.675973 9.97629e+07 0.00377673 2.19134e+07 1.00292e+07 2.20475e+07 226 2.20856e+07 1.42646e+07 0.0032508 2.20093e+07 49.9135 0.00472725 0.995241 0 50.1525 GTEX-1GMR8-0826-SM-9KNUR 1 B1 2 pieces; 1 piece is partially traumatized 7 Thyroid Thyroid 0002046 739 458 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991946 229755 0.965908 0.993262 0.746426 25344 1 76 0.00258865 277 0 1.09271e+08 0.0337914 209988 1.10012e+08 1.27612e+07 25389 5.4451e+07 0 0.219482 0.993262 0.741396 1.09271e+08 0.00365245 2.38138e+07 1.14401e+07 2.39758e+07 272 2.40162e+07 1.82653e+07 0.00311985 2.39104e+07 49.8896 0.00190877 0.994577 0 50.1695 GTEX-1GMR8-1026-SM-9MQLA 1 B1 2 pieces; fibrous content up to 20% 7.9 Heart Heart - Atrial Appendage 0006631 743 454 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986001 288780 0.980309 0.988325 0.849384 20370 1 76 0.00558593 120 0 6.19391e+07 0.0194927 1.39501e+06 6.26709e+07 7.87156e+06 20379 3.08192e+07 0 0.130924 0.988325 0.839467 6.19391e+07 0.00692232 1.31141e+07 6.54851e+06 1.34391e+07 146 1.34145e+07 9.6236e+06 0.00625256 1.32558e+07 49.7024 0.0222593 0.990649 0 50.612 GTEX-1GMR8-1226-SM-9YFLJ 1 B1 2 pieces; external fat 10 & 50% 5.8 Blood Vessel Artery - Coronary 0001621 753 444 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992634 273765 0.973482 0.994116 0.819167 22669 1 76 0.00243797 374 0 1.08884e+08 0.0262403 704287 1.09529e+08 4.01057e+06 22693 5.42204e+07 0 0.154315 0.994116 0.814347 1.08884e+08 0.00366023 2.34415e+07 9.68562e+06 2.36481e+07 349 2.3588e+07 1.97334e+07 0.00304819 2.36674e+07 50.084 0.00643016 0.995598 0 50.2194 GTEX-1GMR8-1426-SM-7RHHL 1 B1 2 pieces; moderate vascular congestion and focal edema 7 Lung Lung 0008952 755 442 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.989827 176524 0.973329 0.992225 0.780876 24606 1 76 0.00274339 280 0 1.00023e+08 0.0262374 300520 1.00807e+08 9.84071e+06 24640 4.97399e+07 0 0.192453 0.992225 0.774805 1.00023e+08 0.00414887 2.20447e+07 1.21264e+07 2.21905e+07 266 2.22328e+07 1.6891e+07 0.00344443 2.22368e+07 50.0045 0.00298114 0.994623 0 50.1648 GTEX-1GMR8-1826-SM-9WYUE 2 B1 6 pieces; 60% epithelium sloughed 6.5 Esophagus Esophagus - Mucosa 0006920 773 424 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993057 259984 0.969447 0.994478 0.774942 24978 1 76 0.00253602 276 0 1.03549e+08 0.030334 653185 1.04124e+08 7.53888e+06 25014 5.15961e+07 0 0.194505 0.994478 0.770663 1.03549e+08 0.00422135 2.28373e+07 1.1245e+07 2.31272e+07 296 2.31226e+07 1.60602e+07 0.00337748 2.29846e+07 49.8503 0.00627314 0.995899 0 50.3154 GTEX-1GMR8-2026-SM-7RHI8 1 B1 6 pieces; well trimmed muscularis 6 Esophagus Esophagus - Muscularis 0004648 776 421 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990628 174878 0.967795 0.993004 0.787928 23794 1 76 0.00254181 272 0 9.4792e+07 0.0319949 2.18929e+06 9.54598e+07 9.50413e+06 23822 4.71588e+07 0 0.179867 0.993004 0.782415 9.4792e+07 0.00428811 2.0559e+07 8.96971e+06 2.07945e+07 306 2.0787e+07 1.23932e+07 0.00341287 2.07812e+07 49.993 0.0229342 0.99538 0 50.2847 GTEX-1GMR8-2426-SM-7MKH3 1 B1 2 pieces; all myometrium, no endometrium on these cuts 5.8 Uterus Uterus 0000995 784 413 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.979 358668 0.962783 0.986212 0.719843 24669 1 76 0.00403534 168 0 8.95293e+07 0.0369594 215098 9.0781e+07 1.32934e+07 24710 4.42462e+07 0 0.242939 0.986212 0.709918 8.95293e+07 0.00554114 1.91514e+07 1.03919e+07 1.95396e+07 174 1.98482e+07 1.4331e+07 0.00478274 1.94529e+07 49.4971 0.00236942 0.993424 0 50.5017 GTEX-1GMR8-2526-SM-7RHI9 1 B1 2 pieces; atrophic, partially sloughed epithelium 6.2 Vagina Vagina 0000996 786 411 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990802 155531 0.968383 0.992903 0.785258 25025 1 76 0.00251028 377 0 1.07809e+08 0.031388 773747 1.08579e+08 1.05286e+07 25065 5.36546e+07 0 0.183124 0.992903 0.779685 1.07809e+08 0.00407112 2.35015e+07 1.18159e+07 2.36925e+07 340 2.36633e+07 1.69863e+07 0.00328905 2.37588e+07 50.1006 0.00712609 0.995005 0 50.2023 GTEX-1GMR8-2926-SM-9KNW5 1 B1 6 pieces; well dissected muscle 6.4 Colon Colon - Sigmoid 0001159 791 406 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992631 200390 0.970375 0.993906 0.808574 23794 1 76 0.00257587 277 0 1.00286e+08 0.0293431 807763 1.00901e+08 1.20382e+07 23818 4.99725e+07 0 0.161801 0.993906 0.803647 1.00286e+08 0.00360889 2.13944e+07 1.04444e+07 2.15949e+07 282 2.15711e+07 1.70371e+07 0.00309172 2.15454e+07 49.9702 0.00800552 0.995182 0 50.2331 GTEX-1GMR8-3026-SM-9KNVF 1 B1 2 pieces 7.2 Brain Brain - Cortex 0001870 830 367 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993477 318361 0.964472 0.994728 0.824677 24747 1 76 0.00245649 270 0 1.10071e+08 0.0350783 4.36053e+06 1.10654e+08 1.24289e+07 24769 5.48566e+07 0 0.139795 0.994728 0.820329 1.10071e+08 0.00341061 2.41511e+07 1.78432e+07 2.43739e+07 312 2.43286e+07 1.38981e+07 0.00293295 2.43129e+07 49.9839 0.0394069 0.995978 0 50.2295 GTEX-1GMR8-3126-SM-9WPOR 1 B1 1 piece; posterior lobe [outlined] comprises 20% of area 6.3 Pituitary Pituitary 0000007 829 368 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986744 267928 0.961133 0.988497 0.764509 25246 1 76 0.00654894 132 0 7.34201e+07 0.0385774 361142 7.42745e+07 1.23674e+07 25278 3.6541e+07 0 0.196624 0.988497 0.755715 7.34201e+07 0.0071387 1.5876e+07 7.98226e+06 1.59636e+07 145 1.60015e+07 1.14748e+07 0.0068433 1.59615e+07 49.9374 0.00486226 0.99025 0 50.1375 GTEX-1GMRU-0003-SM-EYYW5 C1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 392 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.9903 576128 0.969263 0.99251 0.825637 20816 1 76 0.00219856 221 0 9.09421e+07 0.0299206 359344 9.16284e+07 3.19763e+06 20836 4.52492e+07 0 0.143626 0.99251 0.819453 9.09421e+07 0.00287011 2.01413e+07 1.05499e+07 2.0341e+07 242 2.03992e+07 2.18745e+07 0.00253359 2.0271e+07 49.8424 0.00392175 0.99472 0 50.2466 GTEX-1GMRU-0004-SM-7J38O C1 Blood Whole Blood 0013756 392 BP-56478 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GMRU-0004-SM-7MA66 C1 Blood Whole Blood 0013756 392 BP-56478 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/10/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GMRU-0006-SM-AHZ21 C1 9.1 Blood Whole Blood 0013756 392 BP-56504 RNA isolation_PAXgene Blood RNA (Manual) 09/12/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.956495 1.22321e+06 0.955868 0.957843 0.780265 18257 1 76 0.00709703 84 0 9.15929e+07 0.0421724 203103 9.56241e+07 1.83108e+07 18265 4.55179e+07 0 0.175603 0.957843 0.747371 9.15929e+07 0.00918329 2.1182e+07 1.83477e+08 2.13637e+07 116 2.13541e+07 2.46012e+07 0.00813869 2.13646e+07 50.0123 0.00212397 0.959191 0 50.2136 GTEX-1GMRU-0008-SM-EAZD4 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 552 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992673 565591 0.98192 0.993835 0.85892 20343 1 76 0.00167914 295 0 1.06007e+08 0.0177336 185720 1.06665e+08 8.2973e+06 20358 5.28233e+07 0 0.123 0.993835 0.853625 1.06007e+08 0.00282322 2.391e+07 1.1065e+07 2.39838e+07 277 2.40241e+07 2.81143e+07 0.00225051 2.39893e+07 49.9638 0.00174116 0.994998 0 50.077 GTEX-1GMRU-0011-R10b-SM-CJI2L C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 401 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993089 1.22661e+06 0.96257 0.994405 0.844913 24448 1 76 0.00188862 374 0 1.10043e+08 0.0370444 4.60531e+06 1.10662e+08 6.87297e+06 24476 5.4791e+07 0 0.117657 0.994405 0.840185 1.10043e+08 0.00228178 2.39483e+07 1.72204e+07 2.43879e+07 364 2.44568e+07 1.38633e+07 0.00208494 2.39977e+07 49.5263 0.041616 0.99572 0 50.4547 GTEX-1GMRU-0011-R11b-SM-C1YQ4 C1, A1 5.9 Brain Brain - Cerebellar Hemisphere 0002037 401 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987597 829706 0.947562 0.990732 0.767742 23015 1 76 0.0019088 268 0 8.66379e+07 0.0521878 2.66882e+06 8.74484e+07 3.91759e+06 23044 4.30261e+07 0 0.17982 0.990732 0.760626 8.66379e+07 0.00273276 1.84855e+07 1.40601e+07 1.89824e+07 321 1.89809e+07 7.79786e+06 0.00231948 1.87183e+07 49.6517 0.0305188 0.993866 0 50.6631 GTEX-1GMRU-0011-R5a-SM-CKZNS C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 401 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99129 694598 0.959119 0.993726 0.817796 23876 1 76 0.00181515 369 0 9.97325e+07 0.0407151 8.70528e+06 1.00362e+08 9.56685e+06 23900 4.96581e+07 0 0.141323 0.993726 0.812665 9.97325e+07 0.00316209 2.1512e+07 3.23074e+07 2.20883e+07 360 2.2032e+07 7.2389e+06 0.00248697 2.17684e+07 49.6991 0.0867387 0.996162 0 50.6608 GTEX-1GMRU-0011-R6b-SM-A9G3B C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 401 BP-65139 RNA isolation_PAXgene Tissue miRNA 07/08/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986334 269216 0.964559 0.991376 0.819576 23450 1 76 0.00365939 265 0 9.02865e+07 0.0353139 8.11896e+06 9.10719e+07 8.59699e+06 23469 4.48393e+07 0 0.144983 0.991376 0.812508 9.02865e+07 0.00375644 1.94367e+07 2.87858e+07 1.98769e+07 311 1.98341e+07 5.54521e+06 0.00370704 1.9829e+07 49.9935 0.0891489 0.996418 0 50.5599 GTEX-1GMRU-0011-R7b-SM-A96TJ C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 401 BP-65139 RNA isolation_PAXgene Tissue miRNA 07/08/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993015 240081 0.97208 0.994428 0.84063 22004 1 76 0.00156088 268 0 8.51285e+07 0.0277796 7.95526e+06 8.56055e+07 2.73946e+06 22014 4.24442e+07 0 0.131451 0.994428 0.835945 8.51285e+07 0.00196523 1.85766e+07 2.43782e+07 1.89738e+07 313 1.87419e+07 5.65741e+06 0.00176276 1.88948e+07 50.2031 0.0929292 0.995841 0 50.5289 GTEX-1GMRU-0126-SM-9YFLV 0 C1 6 pieces, trace dermal fat; rep delineated; squamous epithelium is ~40 microns 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 552 1219 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.993286 292312 0.972344 0.994621 0.782473 23925 1 76 0.00246262 203 0 8.50496e+07 0.0273616 322347 8.55095e+07 4.87732e+06 23959 4.23776e+07 0 0.18987 0.994621 0.778264 8.50496e+07 0.00334167 1.85133e+07 8.92083e+06 1.86332e+07 200 1.86527e+07 1.49272e+07 0.00290156 1.86055e+07 49.9367 0.00376972 0.995955 0 50.1613 GTEX-1GMRU-0226-SM-9YFLW 0 C1 2 pieces, ~10% fascia, rep. delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 553 1218 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992251 349444 0.970166 0.993724 0.78306 24695 1 76 0.00248314 276 0 1.04156e+08 0.0295839 596609 1.04814e+08 3.95487e+06 24740 5.18907e+07 0 0.187106 0.993724 0.778145 1.04156e+08 0.00349418 2.27598e+07 1.065e+07 2.29964e+07 315 2.29814e+07 1.56252e+07 0.00298791 2.29196e+07 49.9327 0.0056921 0.995196 0 50.2585 GTEX-1GMRU-0326-SM-9WYT6 0 C1 2 pieces, ~5-10% interstitial fat; rep. delineated 8.6 Muscle Muscle - Skeletal 0011907 575 1196 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994714 245288 0.9816 0.995932 0.858229 20811 1 76 0.00195003 269 0 1.00827e+08 0.0181217 869598 1.01239e+08 5.98477e+06 20830 5.02726e+07 0 0.123371 0.995932 0.854738 1.00827e+08 0.00394343 2.16591e+07 8.83515e+06 2.18406e+07 268 2.18489e+07 2.20784e+07 0.00294551 2.17564e+07 49.8939 0.00858954 0.997149 0 50.2086 GTEX-1GMRU-0426-SM-7SB95 0 C1 2 pieces trace nubbin of fat up to ~0.5mm 7.4 Nerve Nerve - Tibial 0001323 579 1193 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.98896 311172 0.955265 0.991596 0.602283 26723 1 76 0.00295561 152 0 8.74009e+07 0.0444674 155828 8.81416e+07 1.00906e+07 26796 4.34374e+07 0 0.352982 0.991596 0.597222 8.74009e+07 0.00453185 1.89971e+07 8.60616e+06 1.9156e+07 155 1.92216e+07 1.06805e+07 0.00374164 1.91516e+07 49.9088 0.00176793 0.994233 0 50.2082 GTEX-1GMRU-0526-SM-7PBZE 0 C1 2 pieces, no significant atherosis or adherent fat; prominent Monkeberg medial sclerosis, rep. delineated 8 Blood Vessel Artery - Tibial 0007610 581 1191 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985619 175498 0.976823 0.990645 0.829813 22320 1 76 0.00274412 204 0 8.90826e+07 0.0227682 204445 8.99239e+07 1.24892e+07 22340 4.42031e+07 0 0.14701 0.990645 0.82205 8.90826e+07 0.00534132 1.90699e+07 6.81545e+06 1.92319e+07 207 1.93702e+07 1.72755e+07 0.00403613 1.93522e+07 49.9768 0.00227353 0.995671 0 50.2115 GTEX-1GMRU-0626-SM-7MKH2 1 C1 2 pieces; spermatogenesis is present, appears slightly reduced 7 Testis Testis 0000473 610 1163 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980391 283867 0.926105 0.98721 0.729266 31433 1 76 0.00373938 118 0 5.65914e+07 0.0734893 217563 5.73246e+07 8.28415e+06 31479 2.80139e+07 0 0.196839 0.98721 0.719939 5.65914e+07 0.00522652 1.15234e+07 8.20653e+06 1.16955e+07 101 1.18951e+07 1.0617e+07 0.00447782 1.1667e+07 49.5159 0.00379528 0.994028 0 50.3706 GTEX-1GMRU-0726-SM-7PBZH 1 C1 2 pieces, trace fascia/vascular elements (<5%) 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 620 1153 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986116 243686 0.969933 0.990414 0.768255 25618 1 76 0.00299266 211 0 9.83483e+07 0.0297942 261551 9.93003e+07 1.40264e+07 25655 4.88168e+07 0 0.201678 0.990414 0.760891 9.83483e+07 0.00501985 2.14125e+07 1.08668e+07 2.16025e+07 237 2.17075e+07 1.55422e+07 0.00400186 2.17175e+07 50.0115 0.00263394 0.994711 0 50.2208 GTEX-1GMRU-0826-SM-9WYT7 1 C1 2 pieces, focal gynecomastoid stromal (delineated) and ductal (encircled) hyperplasia 7.2 Breast Breast - Mammary Tissue 0008367 622 1152 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993187 125544 0.972222 0.994454 0.743324 23955 1 76 0.00260616 127 0 6.22226e+07 0.0273722 197265 6.25696e+07 4.40177e+06 23991 3.09958e+07 0 0.228898 0.994454 0.739201 6.22226e+07 0.00420642 1.36996e+07 6.06589e+06 1.38349e+07 136 1.38409e+07 9.92596e+06 0.00340527 1.37686e+07 49.8692 0.00315273 0.995721 0 50.2458 GTEX-1GMRU-1126-SM-9KNV1 1 C1 2 pieces, no abnormalities 6 Thyroid Thyroid 0002046 626 1149 BP-59384 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991577 232181 0.961828 0.992966 0.706456 26157 1 76 0.00266657 206 0 9.94421e+07 0.037862 325992 1.00147e+08 1.09363e+07 26218 4.95348e+07 0 0.255372 0.992966 0.701486 9.94421e+07 0.00392646 2.16248e+07 1.04726e+07 2.17438e+07 243 2.17853e+07 1.49642e+07 0.00329563 2.17127e+07 49.9166 0.00325515 0.994354 0 50.1372 GTEX-1GMRU-1326-SM-9WYUI 1 C1 2 pieces, no abnormalities 7 Heart Heart - Atrial Appendage 0006631 629 1147 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993775 222227 0.972775 0.995066 0.778499 24313 1 76 0.00232817 270 0 1.01199e+08 0.0269776 2.10270e+06 1.01701e+08 6.89604e+06 24350 5.04383e+07 0 0.194277 0.995066 0.774658 1.01199e+08 0.00427415 2.19425e+07 1.09e+07 2.21531e+07 295 2.21541e+07 1.5296e+07 0.0032999 2.20589e+07 49.8924 0.0206753 0.996356 0 50.2388 GTEX-1GMRU-1426-SM-9WPPL 1 C1 2 pieces, moderate congestion/chronic pneumonitis 6.3 Lung Lung 0008952 630 1147 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.988966 150777 0.960256 0.990369 0.660909 25630 1 76 0.00495088 160 0 8.84126e+07 0.0394694 547671 8.92724e+07 1.23208e+07 25680 4.40234e+07 0 0.299348 0.990369 0.654543 8.84126e+07 0.0050762 1.90487e+07 9.34668e+06 1.94961e+07 169 1.9454e+07 1.06374e+07 0.00501345 1.92063e+07 49.6797 0.00613483 0.991771 0 50.5803 GTEX-1GMRU-1526-SM-9WYT5 1 C1 2 pieces, diffuse marked chronic ischemic damage, remote infarcts noted, rep delineated 7.2 Heart Heart - Left Ventricle 0006566 636 1142 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993914 274291 0.977199 0.99505 0.787973 23699 1 76 0.002366 269 0 9.32708e+07 0.022517 1.35655e+06 9.37347e+07 6.23666e+06 23733 4.64843e+07 0 0.189226 0.99505 0.784072 9.32708e+07 0.0040472 2.04387e+07 7.71676e+06 2.05853e+07 257 2.0624e+07 1.60728e+07 0.00320564 2.04931e+07 49.8408 0.0144722 0.996186 0 50.1786 GTEX-1GMRU-2126-SM-7P8RA 0 C1 6 pieces, focal dermal fat up to ~0.6mm 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 649 1132 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988521 213822 0.974501 0.989982 0.790797 24672 1 76 0.00289358 304 0 1.13172e+08 0.0251279 511176 1.14317e+08 1.50651e+07 24719 5.6383e+07 0 0.183705 0.989982 0.782875 1.13172e+08 0.003404 2.46195e+07 1.53605e+07 2.49127e+07 262 2.49535e+07 2.00084e+07 0.00314842 2.4729e+07 49.7741 0.00447157 0.991444 0 50.296 GTEX-1GMRU-2526-SM-9WG7T 2 C1 6 pieces, mucosa up to ~1 mm, ~40% thickness 5.8 Stomach Stomach 0000945 662 1122 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989142 148634 0.978618 0.991366 0.81497 23011 1 76 0.00240377 261 0 7.7403e+07 0.0210616 1.52103e+06 7.80772e+07 5.5663e+06 23027 3.85296e+07 0 0.163647 0.991366 0.807933 7.7403e+07 0.00351229 1.75165e+07 3.61976e+07 1.77668e+07 212 1.77875e+07 1.42192e+07 0.00295679 1.76593e+07 49.8191 0.0194811 0.993589 0 50.3546 GTEX-1GMRU-2626-SM-9WPPM 1 C1 6 pieces, confirmed target muscularis 5.6 Colon Colon - Sigmoid 0001159 664 1120 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98602 150648 0.967294 0.98803 0.799247 22258 1 76 0.0061705 119 0 5.99836e+07 0.0325367 756981 6.07103e+07 9.54325e+06 22273 2.98473e+07 0 0.168047 0.98803 0.789681 5.99836e+07 0.00740957 1.28365e+07 5.99413e+06 1.29861e+07 137 1.29464e+07 8.19388e+06 0.00678878 1.29959e+07 50.0953 0.0124687 0.99004 0 50.2897 GTEX-1GMRU-3026-SM-7P8TC 1 C1 4 pieces, no abnormalities 6.9 Brain Brain - Cortex 0001870 672 1114 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.939071 621084 0.956683 0.967159 0.80959 26295 1 76 0.00404219 271 0 1.07831e+08 0.0429766 3.82661e+06 1.11493e+08 1.66538e+07 26321 5.21942e+07 0 0.147092 0.967159 0.783002 1.07831e+08 0.00852027 2.29604e+07 2.22329e+07 2.2741e+07 306 2.42493e+07 1.22766e+07 0.00621621 2.43386e+07 50.0919 0.0343215 0.995246 0 49.76 GTEX-1GMRU-3126-SM-7MXVL 1 C1 1 piece, 25% neurohypophysis (delineated), remainder adenohypophysis 6.6 Pituitary Pituitary 0000007 674 1113 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975602 171752 0.955861 0.985732 0.734845 25454 1 76 0.00307828 153 0 7.39161e+07 0.0439117 562258 7.49861e+07 1.23019e+07 25493 3.65063e+07 0 0.221017 0.985732 0.724359 7.39161e+07 0.00437307 1.56553e+07 1.03356e+07 1.57289e+07 167 1.6021e+07 9.33147e+06 0.00371902 1.60474e+07 50.041 0.00749817 0.995861 0 50.1172 GTEX-1GN1U-0002-SM-7J3A7 C1 Blood Whole Blood 0013756 397 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GN1U-0002-SM-7MD51 C1 Blood Whole Blood 0013756 397 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6908 04/07/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GN1U-0006-SM-ARU6G C1 8.9 Blood Whole Blood 0013756 397 BP-56568 RNA isolation_PAXgene Blood RNA (Manual) 09/15/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.977505 360503 0.983065 0.978719 0.781975 17957 1 76 0.00215269 104 0 8.33794e+07 0.0162353 134328 8.51924e+07 2.7357e+06 17970 4.15019e+07 0 0.201091 0.978719 0.765333 8.33794e+07 0.00285471 1.96194e+07 1.00458e+08 1.96276e+07 137 1.96898e+07 2.14424e+07 0.00250327 1.96619e+07 49.9646 0.00157676 0.979933 0 50.0106 GTEX-1GN1U-0008-SM-EZ6MA C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 511 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.992914 427766 0.983552 0.99443 0.878845 21235 1 76 0.00207247 291 0 1.32138e+08 0.0161516 231034 1.32878e+08 9.65586e+06 21254 6.5862e+07 0 0.104708 0.99443 0.873949 1.32138e+08 0.00327105 2.97791e+07 1.25482e+07 2.9848e+07 324 2.99255e+07 3.5353e+07 0.00267085 2.98893e+07 49.9697 0.00173869 0.995945 0 50.0578 GTEX-1GN1U-0011-R10b-SM-CKZNH C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 454 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991662 766458 0.950804 0.993857 0.818548 24218 1 76 0.00203504 166 0 7.22543e+07 0.0489154 2.08469e+06 7.2701e+07 6.80536e+06 24240 3.59674e+07 0 0.132256 0.993857 0.813519 7.22543e+07 0.00337429 1.55711e+07 1.98607e+07 1.57401e+07 202 1.57465e+07 9.96594e+06 0.00270319 1.5725e+07 49.9658 0.0286748 0.996051 0 50.2699 GTEX-1GN1U-0011-R1a-SM-CJI25 C1, A1 6.1 Brain Brain - Hippocampus 0001954 454 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993156 995132 0.96215 0.994585 0.835495 23914 1 76 0.00196204 372 0 9.25856e+07 0.0376182 4.74396e+06 9.30896e+07 5.66092e+06 23937 4.60891e+07 0 0.126655 0.994585 0.830971 9.25856e+07 0.00244602 2.00997e+07 1.81517e+07 2.06418e+07 375 2.05346e+07 9.54711e+06 0.00220368 2.03062e+07 49.7204 0.0509612 0.996015 0 50.6654 GTEX-1GN1U-0011-R2a-SM-CL53A C1, A1 5.9 Brain Brain - Substantia nigra 0002038 454 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992942 442555 0.967208 0.994554 0.843808 23108 1 76 0.00253354 376 0 1.0448e+08 0.0325441 8.61754e+06 1.05052e+08 1.39504e+07 23136 5.20387e+07 0 0.123401 0.994554 0.839212 1.0448e+08 0.00361534 2.26455e+07 1.88955e+07 2.37957e+07 388 2.34989e+07 1.01336e+07 0.00307356 2.30682e+07 49.5376 0.0820309 0.996166 0 51.2383 GTEX-1GN1U-0011-R3a-SM-A8N9M C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 454 BP-65139 RNA isolation_PAXgene Tissue miRNA 07/08/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985635 358549 0.967665 0.988612 0.836079 24289 1 76 0.0104501 199 0 8.53538e+07 0.0320897 5.72267e+06 8.6337e+07 1.45533e+07 24305 4.2404e+07 0 0.131586 0.988612 0.826558 8.53538e+07 0.0113518 1.83915e+07 1.87415e+07 1.9048e+07 249 1.89113e+07 7.98332e+06 0.0108996 1.87129e+07 49.7363 0.0662829 0.991588 0 50.8767 GTEX-1GN1U-0011-R5a-SM-9QEIS C1, A1 6.5 Brain Brain - Caudate (basal ganglia) 0001873 454 BP-60806 RNA isolation_PAXgene Tissue miRNA 02/23/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991239 404368 0.963919 0.994007 0.845316 23749 1 76 0.00180496 271 0 7.74345e+07 0.0357983 2.76207e+06 7.79013e+07 3.7552e+06 23763 3.85337e+07 0 0.118603 0.994007 0.84025 7.74345e+07 0.00379568 1.68741e+07 1.17683e+07 1.70834e+07 273 1.71036e+07 1.05804e+07 0.00279755 1.70431e+07 49.9114 0.035456 0.996774 0 50.3082 GTEX-1GN1U-0011-R6a-SM-CKZNO C1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 454 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992075 632722 0.959112 0.994208 0.827355 25097 1 76 0.00197825 271 0 1.02358e+08 0.0405463 4.76626e+06 1.02954e+08 9.47541e+06 25121 5.09652e+07 0 0.131757 0.994208 0.822563 1.02358e+08 0.00325851 2.22131e+07 1.75115e+07 2.24551e+07 327 2.24822e+07 1.28965e+07 0.002617 2.23752e+07 49.8807 0.046295 0.996342 0 50.2709 GTEX-1GN1U-0011-R7a-SM-CE6RE C1, A1 8.1 Brain Brain - Putamen (basal ganglia) 0001874 454 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.984898 788875 0.953399 0.986835 0.804446 24427 1 76 0.00787545 131 0 6.639e+07 0.0463341 2.44952e+06 6.72757e+07 1.09786e+07 24445 3.29974e+07 0 0.148953 0.986835 0.793855 6.639e+07 0.00792854 1.43804e+07 1.54306e+07 1.4476e+07 148 1.4514e+07 8.93985e+06 0.00790195 1.44748e+07 49.9325 0.0364102 0.988772 0 50.1656 GTEX-1GN1U-0011-R8a-SM-CL537 C1, A1 5.8 Brain Brain - Hypothalamus 0001898 454 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991013 859355 0.961075 0.992963 0.845699 24534 1 76 0.00238806 371 0 1.13019e+08 0.038588 7.54222e+06 1.1382e+08 1.31641e+07 24560 5.62546e+07 0 0.115376 0.992963 0.839748 1.13019e+08 0.00400909 2.45312e+07 2.47858e+07 2.50139e+07 406 2.49524e+07 1.24003e+07 0.00319698 2.47923e+07 49.8391 0.0662642 0.994913 0 50.4871 GTEX-1GN1U-0011-R9b-SM-CMKFW C1, A1 8.1 Brain Brain - Spinal cord (cervical c-1) 0006469 454 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994925 766858 0.955883 0.99584 0.78865 24649 1 76 0.0021099 389 0 1.18663e+08 0.0437775 2.06075e+06 1.19159e+08 7.84173e+06 24687 5.91492e+07 0 0.167233 0.99584 0.785369 1.18663e+08 0.00248798 2.60191e+07 1.57531e+07 2.6431e+07 353 2.62772e+07 1.6625e+07 0.00229876 2.62742e+07 49.9971 0.0172941 0.996754 0 50.3926 GTEX-1GN1U-0126-SM-7PBZK 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~40-50 microns 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 510 478 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985592 306322 0.974685 0.990539 0.827268 24762 1 76 0.00279758 404 0 1.2358e+08 0.0249587 477380 1.24761e+08 1.65286e+07 24797 6.13267e+07 0 0.147417 0.990539 0.819442 1.2358e+08 0.00548496 2.67153e+07 1.40642e+07 2.69367e+07 376 2.71147e+07 2.28317e+07 0.00413456 2.71151e+07 50.0004 0.00382637 0.995486 0 50.2064 GTEX-1GN1U-0226-SM-9YFLQ 0 C1 2 pieces, vascular/fascia elements are <5% of tissue; rep delineated 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 511 478 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992791 272217 0.972073 0.994119 0.774027 23875 1 76 0.00249805 278 0 1.01746e+08 0.0276382 551286 1.02348e+08 3.81656e+06 23916 5.06971e+07 0 0.198046 0.994119 0.769475 1.01746e+08 0.00354457 2.22195e+07 1.02049e+07 2.24947e+07 308 2.24684e+07 1.55837e+07 0.00302061 2.23738e+07 49.8946 0.00538641 0.995448 0 50.3077 GTEX-1GN1U-0326-SM-9MQLT 0 C1 2 pieces, trace nubbin of adherent fat, ~0.2mm 7.5 Nerve Nerve - Tibial 0001323 531 458 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984676 177699 0.967819 0.986755 0.776348 23757 1 76 0.00562849 151 0 6.7532e+07 0.0318686 215414 6.84385e+07 8.13862e+06 23784 3.36132e+07 0 0.191471 0.986755 0.766065 6.7532e+07 0.00705789 1.47932e+07 5.80248e+06 1.49091e+07 142 1.49311e+07 1.0886e+07 0.00634168 1.49035e+07 49.9536 0.00314756 0.988834 0 50.195 GTEX-1GN1U-0426-SM-9MQM9 0 C1 2 pieces, no significant atherosis or adherent fat 8.4 Blood Vessel Artery - Tibial 0007610 532 458 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986016 369575 0.973665 0.988208 0.82795 21566 1 76 0.00547171 143 0 7.24184e+07 0.0259081 255604 7.32826e+07 8.75443e+06 21587 3.6022e+07 0 0.145715 0.988208 0.818186 7.24184e+07 0.00693046 1.55178e+07 6.0357e+06 1.56247e+07 151 1.56301e+07 1.40145e+07 0.00619947 1.5663e+07 50.0526 0.00348792 0.990399 0 50.1716 GTEX-1GN1U-0526-SM-9KNTT 0 C1 2 pieces, well- sampled normal duct and lobular units, rep delineated 7.1 Breast Breast - Mammary Tissue 0008367 560 430 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.99175 262005 0.965763 0.99293 0.689368 27279 1 76 0.00277902 285 0 1.25041e+08 0.0337289 435557 1.25931e+08 1.41814e+07 27358 6.22836e+07 0 0.276395 0.99293 0.684494 1.25041e+08 0.00366337 2.74742e+07 1.28836e+07 2.76486e+07 298 2.76928e+07 1.83166e+07 0.00322067 2.75686e+07 49.8876 0.00345869 0.99411 0 50.1583 GTEX-1GN1U-0626-SM-9MQL9 0 C1 6 pieces, trace dermal fat; squamous epithelium is~25-35 microns 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 561 429 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985757 212570 0.974154 0.987749 0.790814 23273 1 76 0.00566119 168 0 7.4362e+07 0.0255916 278294 7.52843e+07 9.09612e+06 23297 3.70211e+07 0 0.18334 0.987749 0.781126 7.4362e+07 0.00673877 1.63134e+07 7.7501e+06 1.64439e+07 153 1.64737e+07 1.30398e+07 0.00619889 1.64261e+07 49.9276 0.00369658 0.989742 0 50.1991 GTEX-1GN1U-0726-SM-9MQKL 1 C1 2 pieces, fascia/vascular elements are ~15-20% tissue; rep delineated 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 567 424 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.9863 188892 0.978996 0.988196 0.825886 22955 1 76 0.00563339 147 0 7.13725e+07 0.0206219 207806 7.22251e+07 8.5377e+06 22977 3.55341e+07 0 0.15311 0.988196 0.816137 7.13725e+07 0.0067423 1.56913e+07 8.11507e+06 1.58503e+07 151 1.58698e+07 1.35737e+07 0.00618678 1.58045e+07 49.8969 0.0028772 0.990091 0 50.2522 GTEX-1GN1U-0826-SM-9WPPX 1 C1 2 pieces, no abnormalities 6.3 Thyroid Thyroid 0002046 568 423 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.989585 176425 0.959589 0.990875 0.677395 26600 1 76 0.00470068 273 0 1.07265e+08 0.0401389 630547 1.08253e+08 1.39495e+07 26687 5.34263e+07 0 0.282194 0.990875 0.671214 1.07265e+08 0.00498276 2.30074e+07 1.01664e+07 2.36322e+07 256 2.36156e+07 1.33456e+07 0.00484154 2.3151e+07 49.5033 0.00582475 0.992165 0 50.6698 GTEX-1GN1U-0926-SM-9WPPY 1 C1 2 pieces, moderate/focally marked passive congestion, cardiac features 6.8 Liver Liver 0001114 570 422 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987957 211587 0.9773 0.989529 0.795319 21338 1 76 0.00620496 126 0 7.36581e+07 0.0225575 636180 7.44375e+07 1.12995e+07 21365 3.66889e+07 0 0.181981 0.989529 0.786991 7.36581e+07 0.00660814 1.60523e+07 1.05418e+07 1.61961e+07 152 1.62137e+07 1.17307e+07 0.00640623 1.61385e+07 49.8837 0.0085465 0.991102 0 50.223 GTEX-1GN1U-1026-SM-9WYUP 1 C1 2 pieces, moderate chronic congestion 7.2 Lung Lung 0008952 571 421 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992834 219704 0.970475 0.994278 0.743206 24997 1 76 0.00259595 201 0 9.21842e+07 0.029216 209863 9.27147e+07 6.74346e+06 25041 4.59068e+07 0 0.22727 0.994278 0.738953 9.21842e+07 0.00451935 2.02855e+07 8.38033e+06 2.04657e+07 209 2.04632e+07 1.43444e+07 0.00355625 2.04175e+07 49.9442 0.00226353 0.995722 0 50.2211 GTEX-1GN1U-1126-SM-9WPPZ 2 C1 2 pieces, moderate saponification; Islets visible, early degenerative changes ( rep delineated) 6.6 Pancreas Pancreas 0001150 572 421 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987894 232359 0.973933 0.989626 0.803568 22719 1 76 0.0063211 103 0 7.52194e+07 0.0258325 245847 7.60079e+07 1.20374e+07 22742 3.74543e+07 0 0.170365 0.989626 0.795231 7.52194e+07 0.00714209 1.69840e+07 1.97977e+07 1.72021e+07 108 1.71883e+07 1.94932e+07 0.00673088 1.7127e+07 49.9107 0.00323449 0.991358 0 50.3189 GTEX-1GN1U-1326-SM-9KNTM 1 C1 2 pieces, partial rim of adherent fat up to ~0.7mm, delineated 6.5 Blood Vessel Artery - Coronary 0001621 577 417 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992456 196378 0.972845 0.993691 0.783407 23052 1 76 0.00270351 211 0 9.40126e+07 0.026798 320199 9.46094e+07 1.15294e+07 23082 4.68278e+07 0 0.189438 0.993691 0.778464 9.40126e+07 0.00345059 2.02291e+07 8.37241e+06 2.03891e+07 240 2.03902e+07 1.69757e+07 0.00307659 2.03431e+07 49.9422 0.00338443 0.994926 0 50.197 GTEX-1GN1U-1426-SM-7P8TF 1 C1 2 pieces, no abnormalities 7.6 Heart Heart - Atrial Appendage 0006631 578 416 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.952118 218336 0.979573 0.973725 0.804941 21730 1 76 0.00426729 123 0 7.11194e+07 0.0201404 1.24913e+06 7.30385e+07 1.20926e+07 21742 3.46794e+07 0 0.174632 0.973725 0.783791 7.11194e+07 0.0073267 1.49464e+07 9.11547e+06 1.48653e+07 145 1.56267e+07 1.20225e+07 0.00576305 1.55967e+07 49.952 0.0171023 0.995332 0 49.864 GTEX-1GN1U-1626-SM-9MQKP 1 C1 6 pieces, focal atherosis up to ~0.3mm 8 Blood Vessel Artery - Aorta 0001496 581 414 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.982566 180912 0.977884 0.984505 0.840245 21047 1 76 0.00572402 125 0 6.05785e+07 0.0217167 99747 6.15319e+07 7.72562e+06 21056 3.01396e+07 0 0.137638 0.984505 0.827225 6.05785e+07 0.00717759 1.30141e+07 5.10725e+06 1.30718e+07 129 1.30804e+07 1.21181e+07 0.00644938 1.31209e+07 50.0774 0.00162106 0.986443 0 50.1106 GTEX-1GN1U-1726-SM-9JGFY 1 C1 6 pieces, confirmed target muscularis 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 583 412 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181,LCSET-7262 06/02/2015 TruSeq.v1 RNASEQ 0.991604 164332 0.968944 0.993431 0.791355 24116 1 76 0.00330195 272 0 9.94796e+07 0.0308255 881819 1.00137e+08 1.0631e+07 24148 4.95417e+07 0 0.177589 0.993431 0.786157 9.94796e+07 0.00359733 2.1233e+07 8.70532e+06 2.16783e+07 290 2.16545e+07 1.46208e+07 0.00344936 2.14224e+07 49.7307 0.00880609 0.995257 0 50.5188 GTEX-1GN1U-1826-SM-9JGH2 1 C1 6 pieces, target squamous mucosa up to ~0.2mm, ~20-25% thickness, focally sloughing, approaching score 2. Submucosal mucus gland delineated 7 Esophagus Esophagus - Mucosa 0006920 584 412 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.99396 425991 0.971739 0.995149 0.782479 24478 1 76 0.00202668 373 0 1.14647e+08 0.0280423 753281 1.15206e+08 5.72638e+06 24511 5.71374e+07 0 0.18926 0.995149 0.778683 1.14647e+08 0.00299144 2.5499e+07 1.21892e+07 2.57795e+07 375 2.57245e+07 1.70098e+07 0.00250848 2.5685e+07 49.9616 0.00653858 0.996338 0 50.2736 GTEX-1GN1U-1926-SM-9KNUW 1 C1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 585 411 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992286 244075 0.968813 0.993304 0.756071 24317 1 76 0.00274236 209 0 8.89135e+07 0.0309041 538225 8.95129e+07 1.08471e+07 24359 4.43041e+07 0 0.212741 0.993304 0.751008 8.89135e+07 0.00329601 1.91968e+07 7.72416e+06 1.93471e+07 225 1.93679e+07 1.41216e+07 0.0030189 1.92641e+07 49.8658 0.00601282 0.994322 0 50.195 GTEX-1GN1U-2126-SM-AHZ4J 3 C1 6 pieces, glomeruli present; advanced tubular autolysis 6 Kidney Kidney - Cortex 0001225 589 408 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.993607 253702 0.979472 0.995332 0.851791 22552 1 76 0.00173565 368 0 9.07687e+07 0.0203977 3.61184e+06 9.11944e+07 3.38252e+06 22570 4.52209e+07 0 0.127682 0.995332 0.847814 9.07687e+07 0.0026755 2.02717e+07 1.97564e+07 2.02839e+07 364 2.01577e+07 7.10958e+06 0.00220476 2.05296e+07 50.4571 0.039606 0.997057 0 50.015 GTEX-1GN1U-2226-SM-9MQK1 0 C1 2 pieces, focal tendon, delineated/ensquared; ~5-10% interstitial fat;, delineated 8.2 Muscle Muscle - Skeletal 0011907 591 407 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986393 315401 0.983627 0.988596 0.87149 19078 1 76 0.00528238 119 0 5.96627e+07 0.0161314 539038 6.03509e+07 7.00634e+06 19085 2.96968e+07 0 0.112137 0.988596 0.861552 5.96627e+07 0.00684224 1.2883e+07 6.33404e+06 1.31815e+07 137 1.31591e+07 1.10631e+07 0.00606057 1.30166e+07 49.7278 0.00893173 0.990799 0 50.5726 GTEX-1GN1U-2326-SM-9MQK4 1 C1 3 pieces, involuted parenchyma; ~25% adherent fibroadipose tissue, delineated 5.9 Ovary Ovary 0000992 593 405 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984326 273947 0.970964 0.986674 0.749551 23039 1 76 0.00585003 120 0 6.14192e+07 0.0287277 192917 6.22488e+07 7.79363e+06 23060 3.05309e+07 0 0.221414 0.986674 0.739562 6.14192e+07 0.00746798 1.33972e+07 5.7125e+06 1.34851e+07 126 1.3504e+07 9.72513e+06 0.00665708 1.35202e+07 50.0299 0.00309913 0.98902 0 50.1635 GTEX-1GN1U-2426-SM-9KNTU 1 C1 6 pieces, squamous mucosa is ~0.1-0.2mm 6.1 Vagina Vagina 0000996 596 403 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992545 168059 0.966926 0.993867 0.7 24868 1 76 0.00271133 174 0 8.79162e+07 0.0328197 313550 8.84587e+07 9.81035e+06 24919 4.37917e+07 0 0.266926 0.993867 0.695708 8.79162e+07 0.00391538 1.9328e+07 8.79251e+06 1.94496e+07 184 1.94595e+07 1.27494e+07 0.00331255 1.94345e+07 49.9678 0.00354459 0.99519 0 50.1569 GTEX-1GN1U-2526-SM-7MKH4 1 C1 2 pieces myometrium; minute focus autolyzed endometrial stroma, delineated 7.1 Uterus Uterus 0000995 597 402 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.978773 258411 0.965153 0.986243 0.732911 23910 1 76 0.00384389 136 0 7.31314e+07 0.0345902 151426 7.41515e+07 1.08379e+07 23946 3.61615e+07 0 0.232242 0.986243 0.722828 7.31314e+07 0.00556957 1.56494e+07 7.09597e+06 1.59909e+07 143 1.62396e+07 1.13172e+07 0.00470019 1.5923e+07 49.5078 0.00204212 0.993713 0 50.5397 GTEX-1GN1U-3126-SM-9KNV6 1 C1 4 pieces, no abnormalities 6.9 Brain Brain - Cortex 0001870 610 392 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 EXCLUDE 0.993899 276503 0.967298 0.995017 0.786987 26392 1 76 0.00263243 272 0 1.05697e+08 0.0323859 2.48594e+06 1.06226e+08 1.21739e+07 26424 5.26838e+07 0 0.180312 0.995017 0.783065 1.05697e+08 0.00343965 2.32547e+07 1.31138e+07 2.35121e+07 310 2.35134e+07 1.41909e+07 0.00303558 2.3361e+07 49.8374 0.0234023 0.996135 0 50.2751 GTEX-1GN1U-3226-SM-7MKH5 2 C1 1 piece, ~25% neurohypophysis (delineated); rest is adenohypohypophysis 7.1 Pituitary Pituitary 0000007 610 392 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.980029 249521 0.959415 0.986566 0.739698 25644 1 76 0.00381739 158 0 8.07621e+07 0.0403348 358725 8.18618e+07 1.15925e+07 25685 3.9986e+07 0 0.219716 0.986566 0.729761 8.07621e+07 0.00531351 1.74575e+07 1.01729e+07 1.77199e+07 167 1.79705e+07 1.19225e+07 0.0045605 1.77068e+07 49.6303 0.00438208 0.993103 0 50.373 GTEX-1GN1V-0002-SM-7J3B5 B1 Blood Whole Blood 0013756 1045 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GN1V-0002-SM-7MA7H B1 Blood Whole Blood 0013756 1045 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GN1V-0006-SM-ADEHD B1 8.6 Blood Whole Blood 0013756 1045 BP-56568 RNA isolation_PAXgene Blood RNA (Manual) 09/15/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.977097 720382 0.970372 0.983599 0.766046 20317 1 76 0.00365621 211 0 1.0758e+08 0.0289037 334951 1.09374e+08 1.13974e+07 20345 5.32662e+07 0 0.204325 0.983599 0.753482 1.0758e+08 0.0037643 2.42016e+07 8.17763e+07 2.45442e+07 228 2.48389e+07 2.30325e+07 0.00370989 2.45789e+07 49.737 0.00306243 0.990102 0 50.3514 GTEX-1GN1V-0008-SM-EAZD5 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1117 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.991437 408959 0.979091 0.992668 0.836227 20207 1 76 0.00179005 154 0 7.23183e+07 0.0205781 265367 7.28525e+07 5.62593e+06 20228 3.60164e+07 0 0.142864 0.992668 0.830096 7.23183e+07 0.0031495 1.62728e+07 6.77958e+06 1.63088e+07 148 1.63093e+07 1.84359e+07 0.00246893 1.63649e+07 50.0851 0.00364252 0.993899 0 50.0553 GTEX-1GN1V-0011-R10a-SM-CKZNU B1, A1 5.6 Brain Brain - Frontal Cortex (BA9) 0009834 1092 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991496 507803 0.966485 0.994098 0.846363 21640 1 76 0.00196469 368 0 8.78685e+07 0.0334085 1.32421e+07 8.83902e+07 8.6665e+06 21650 4.37536e+07 0 0.120122 0.994098 0.841368 8.78685e+07 0.00357857 1.88821e+07 3.19155e+07 1.98138e+07 360 1.94272e+07 4.42444e+06 0.00276952 1.94295e+07 50.003 0.149815 0.9967 0 51.2038 GTEX-1GN1V-0011-R11b-SM-A8N9N B1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1092 BP-65139 RNA isolation_PAXgene Tissue miRNA 07/08/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984131 234637 0.95661 0.987369 0.788977 23125 1 76 0.0109771 124 0 6.72486e+07 0.0432395 4.29459e+06 6.81089e+07 1.1497e+07 23140 3.3395e+07 0 0.167633 0.987369 0.779011 6.72486e+07 0.011956 1.44665e+07 1.56043e+07 1.484e+07 162 1.47928e+07 4.70627e+06 0.0114649 1.46776e+07 49.8045 0.0630548 0.990606 0 50.6371 GTEX-1GN1V-0011-R8a-SM-CKZNV B1, A1 5.7 Brain Brain - Hypothalamus 0001898 1092 BP-69093 RNA isolation_PAXgene Tissue miRNA 11/17/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99046 400855 0.958143 0.992789 0.842334 20858 1 76 0.00195667 208 0 6.50964e+07 0.0417271 9.09252e+06 6.55692e+07 6.04784e+06 20867 3.2414e+07 0 0.115809 0.992789 0.83626 6.50964e+07 0.00341844 1.41013e+07 1.80748e+07 1.47762e+07 225 1.46121e+07 4.32781e+06 0.00268584 1.43865e+07 49.611 0.138671 0.995117 0 51.1686 GTEX-1GN1V-0126-SM-9WPOS 1 B1 6 pieces; up to 10% predominantly attached fat, epidermis measures 34 microns 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1118 654 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987654 191312 0.970864 0.98932 0.738807 24727 1 76 0.00647015 146 0 7.78762e+07 0.0289168 712841 7.87169e+07 1.23585e+07 24770 3.87698e+07 0 0.232058 0.98932 0.730916 7.78762e+07 0.00691966 1.71048e+07 8.4909e+06 1.72245e+07 151 1.72365e+07 1.1178e+07 0.00669452 1.72127e+07 49.9654 0.00905576 0.990986 0 50.1745 GTEX-1GN1V-0226-SM-9WYTN 1 B1 2 pieces; mature adipose tissue, up to ~10% fibrous tissue/vessels 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1121 651 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993506 205577 0.975728 0.994783 0.762303 22731 1 76 0.00247968 138 0 7.19918e+07 0.0239916 459892 7.23694e+07 4.75192e+06 22761 3.58727e+07 0 0.213425 0.994783 0.758326 7.19918e+07 0.00432387 1.58963e+07 5.81218e+06 1.60416e+07 165 1.60487e+07 1.07994e+07 0.00340059 1.59742e+07 49.8837 0.00635479 0.99606 0 50.2274 GTEX-1GN1V-0326-SM-9WYTO 0 B1 2 pieces; skeletal muscle with from 10-20% mostly internal fat 8 Muscle Muscle - Skeletal 0011907 1125 647 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994483 253107 0.981233 0.995837 0.862543 20166 1 76 0.00210444 198 0 8.77766e+07 0.0185517 1.6164e+06 8.81435e+07 5.78393e+06 20184 4.37585e+07 0 0.11869 0.995837 0.858952 8.77766e+07 0.00411987 1.92666e+07 6.90477e+06 1.94934e+07 225 1.95387e+07 1.85887e+07 0.00311078 1.93278e+07 49.7287 0.0183383 0.99719 0 50.2925 GTEX-1GN1V-0526-SM-9MQLQ 1 B1 2 pieces; nerve with 20-30% attached and internal fat 7 Nerve Nerve - Tibial 0001323 1136 636 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983464 268546 0.968158 0.985877 0.739969 23266 1 76 0.00587902 144 0 6.37147e+07 0.0315404 240362 6.46275e+07 8.03348e+06 23293 3.16793e+07 0 0.228189 0.985877 0.729518 6.37147e+07 0.00718664 1.40032e+07 6.46007e+06 1.41129e+07 131 1.41472e+07 9.48169e+06 0.00653123 1.41179e+07 49.9482 0.00371919 0.98829 0 50.1952 GTEX-1GN1V-0626-SM-7P8QU 2 B1 2 pieces; mild interstitial fibrosis, small component of fat 6.8 Thyroid Thyroid 0002046 1177 595 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990338 279293 0.972312 0.992679 0.773088 24520 1 76 0.00292031 208 0 9.67883e+07 0.0273819 571037 9.75021e+07 1.33038e+07 24556 4.81594e+07 0 0.199224 0.992679 0.767428 9.67883e+07 0.00448616 2.12683e+07 1.07675e+07 2.15034e+07 251 2.15971e+07 1.64603e+07 0.00370139 2.13896e+07 49.7586 0.00585666 0.99502 0 50.2749 GTEX-1GN1V-0826-SM-9KNU6 1 B1 2 pieces; some perivascular fat 5.8 Heart Heart - Left Ventricle 0006566 1188 584 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992884 158166 0.985673 0.99427 0.849987 21484 1 76 0.00232939 368 0 1.28861e+08 0.0142381 1.50551e+07 1.29604e+08 1.51309e+07 21498 6.42515e+07 0 0.135686 0.99427 0.845117 1.28861e+08 0.00347986 2.85986e+07 3.85423e+07 2.95308e+07 356 2.93943e+07 8.41978e+06 0.00290382 2.88685e+07 49.5488 0.116162 0.995656 0 50.8018 GTEX-1GN1V-1026-SM-CNPPS 1 B1 2 pieces; some interstitial fibrosis 6.2 Heart Heart - Atrial Appendage 0006631 1198 574 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986041 201782 0.983616 0.989175 0.852 20304 1 76 0.0054285 262 0 8.21772e+07 0.0163049 7.01772e+06 8.30765e+07 1.98101e+07 20312 4.08711e+07 0 0.131616 0.989175 0.842777 8.21772e+07 0.00854959 1.78618e+07 2.53368e+07 1.87156e+07 281 1.86428e+07 4.87635e+06 0.00698411 1.81196e+07 49.2883 0.084473 0.992309 0 51.1671 GTEX-1GN1V-1626-SM-7PBZF 2 B1 2 pieces; 50 and 60% attached and internal fat 6.6 Adrenal Gland Adrenal Gland 0002369 1218 554 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986803 258148 0.972816 0.991122 0.816371 22977 1 76 0.00302106 374 0 1.01675e+08 0.0269228 6.04855e+06 1.02586e+08 1.41868e+07 23006 5.04866e+07 0 0.156445 0.991122 0.809123 1.01675e+08 0.00503311 2.19056e+07 1.49094e+07 2.22794e+07 351 2.23525e+07 1.35562e+07 0.0040227 2.22437e+07 49.878 0.0589608 0.995441 0 50.4231 GTEX-1GN1V-1826-SM-9JGGD 2 B1 2 pieces; some peritubular fibrosis and hyalinization 5.8 Testis Testis 0000473 1225 547 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991561 479049 0.921067 0.992876 0.686839 35064 1 76 0.00221587 283 0 1.17132e+08 0.0786571 1.98442e+06 1.17973e+08 6.3477e+06 35158 5.83579e+07 0 0.234228 0.992876 0.681946 1.17132e+08 0.00312024 2.4221e+07 1.63771e+07 2.45482e+07 315 2.45606e+07 1.51701e+07 0.00266745 2.43419e+07 49.7764 0.016821 0.994191 0 50.3354 GTEX-1GN1V-2826-SM-9JGIA 1 B1 6 pieces; relatively well trimmed, 5-10% fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1267 505 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.988333 235597 0.974596 0.989579 0.762091 23859 1 76 0.00337912 277 0 1.11957e+08 0.0251615 894517 1.13136e+08 1.0084e+07 23904 5.57498e+07 0 0.212506 0.989579 0.754149 1.11957e+08 0.0035796 2.44879e+07 1.35831e+07 2.47009e+07 312 2.46785e+07 1.70787e+07 0.00347923 2.46434e+07 49.9643 0.00790656 0.990825 0 50.2165 GTEX-1GN1V-2926-SM-9JGI3 1 B1 2 pieces; salivary gland elements, ~30% fat, stroma, skeletal muscle 7.7 Salivary Gland Minor Salivary Gland 0006330 1269 503 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991708 399860 0.970681 0.992978 0.777271 27419 1 76 0.00223147 400 0 1.54071e+08 0.0282813 920887 1.5516e+08 7.80913e+06 27475 7.67253e+07 0 0.19341 0.992978 0.771813 1.54071e+08 0.00308867 3.44045e+07 2.49471e+07 3.4865e+07 372 3.49127e+07 2.43088e+07 0.00265952 3.45376e+07 49.73 0.00593506 0.994249 0 50.3324 GTEX-1GN1V-3026-SM-9JGH9 2 B1 1 piece; adenohypophysis 7.2 Pituitary Pituitary 0000007 1331 441 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.991509 209928 0.957046 0.993298 0.757057 24463 1 76 0.00373643 118 0 5.79898e+07 0.0427381 524283 5.8381e+07 6.24959e+06 24491 2.88624e+07 0 0.199989 0.993298 0.751983 5.79898e+07 0.00418668 1.21406e+07 1.02095e+07 1.22513e+07 125 1.2263e+07 9.05744e+06 0.00396115 1.22295e+07 49.9316 0.00898036 0.995087 0 50.2269 GTEX-1GN1V-3126-SM-7PBZG 1 B1 4 pieces 5.9 Brain Brain - Cortex 0001870 1330 442 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986473 290403 0.973282 0.991456 0.844814 22786 1 76 0.00289047 369 0 1.01455e+08 0.0265838 1.08771e+07 1.0233e+08 1.392e+07 22798 5.03722e+07 0 0.128468 0.991456 0.837596 1.01455e+08 0.00544588 2.20801e+07 3.22185e+07 2.26726e+07 384 2.2453e+07 6.28196e+06 0.00416175 2.26779e+07 50.2492 0.106295 0.996439 0 50.662 GTEX-1GN1W-0001-SM-7J3B1 B1 Blood Whole Blood 0013756 -96 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6780,LCSET-6880 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GN1W-0001-SM-7MA7D B1 Blood Whole Blood 0013756 -96 BP-56549 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GN1W-0006-SM-A9SKL B1 9 Blood Whole Blood 0013756 -96 BP-56568 RNA isolation_PAXgene Blood RNA (Manual) 09/15/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.985228 744759 0.957888 0.986948 0.806944 18840 1 76 0.00665645 115 0 8.09771e+07 0.0414729 513778 8.2048e+07 1.48832e+07 18850 4.02936e+07 0 0.150944 0.986948 0.796412 8.09771e+07 0.00840265 1.78481e+07 6.5073e+07 1.80126e+07 136 1.8028e+07 1.70664e+07 0.00752803 1.79786e+07 49.9315 0.00626192 0.988668 0 50.2294 GTEX-1GN1W-0008-SM-EZ6MB B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 283 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.993252 321037 0.982162 0.994612 0.87659 20558 1 76 0.00208062 291 0 1.04568e+08 0.017554 264337 1.05134e+08 7.65805e+06 20573 5.21343e+07 0 0.105572 0.994612 0.871867 1.04568e+08 0.00310461 2.3558e+07 1.13442e+07 2.36447e+07 277 2.369e+07 2.82122e+07 0.00259192 2.36462e+07 49.9537 0.00251428 0.995972 0 50.0919 GTEX-1GN1W-0126-SM-7MXV7 1 B1 2 pieces; 1.7 mm fibrovascular focus at edge of 1 piece 7.4 Thyroid Thyroid 0002046 227 594 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.977454 125087 0.968348 0.986757 0.761075 24143 1 76 0.00297326 162 0 8.08613e+07 0.0313948 477331 8.19465e+07 1.32841e+07 24184 3.99829e+07 0 0.207273 0.986757 0.750996 8.08613e+07 0.00409328 1.75886e+07 8.53062e+06 1.76369e+07 187 1.79342e+07 1.30173e+07 0.00352799 1.79839e+07 50.0691 0.00582491 0.99606 0 50.0687 GTEX-1GN1W-0226-SM-7P8QY 1 B1 3 pieces; 10% external fat 9.6 Heart Heart - Atrial Appendage 0006631 233 588 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.9883 257886 0.98197 0.989997 0.848228 23470 1 76 0.00240077 275 0 1.47854e+08 0.0177009 3.8756e+06 1.49348e+08 1.69121e+07 23495 7.36834e+07 0 0.133742 0.989997 0.839743 1.47854e+08 0.00356101 3.12281e+07 2.45566e+07 3.14975e+07 297 3.13698e+07 2.69389e+07 0.00297989 3.15666e+07 50.1564 0.0259501 0.991694 0 50.2148 GTEX-1GN1W-0326-SM-9JGHF 1 B1 2 pieces; excessive 50% (up to 3 mm) external fat on 1 piece, 10% on other 8.9 Heart Heart - Left Ventricle 0006566 238 583 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994994 368039 0.982833 0.996201 0.87532 22161 1 76 0.00177834 374 0 1.29589e+08 0.0168701 2.36293e+06 1.30083e+08 6.27885e+06 22178 6.46206e+07 0 0.107513 0.996201 0.871995 1.29589e+08 0.00282494 2.85244e+07 1.56753e+07 2.889e+07 335 2.87895e+07 2.4457e+07 0.002301 2.87529e+07 49.9681 0.0181648 0.997407 0 50.3184 GTEX-1GN1W-0526-SM-9MQJQ 1 B1 6 pieces; up to 20% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 271 550 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984711 377007 0.970317 0.987017 0.77853 23714 1 76 0.00567958 151 0 6.52205e+07 0.0294455 548588 6.60784e+07 8.22922e+06 23742 3.2434e+07 0 0.191787 0.987017 0.768422 6.52205e+07 0.00716056 1.4247e+07 6.06951e+06 1.43582e+07 140 1.43801e+07 1.04241e+07 0.00641834 1.43687e+07 49.9801 0.00830208 0.989322 0 50.1944 GTEX-1GN1W-0626-SM-9MQK3 1 B1 2 pieces; 5 & 10% fibrous content 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 288 533 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986601 291248 0.976361 0.988668 0.815807 22228 1 76 0.00550187 131 0 6.32983e+07 0.0233576 386859 6.40239e+07 7.4369e+06 22245 3.15074e+07 0 0.160554 0.988668 0.806562 6.32983e+07 0.00685152 1.393e+07 5.91180e+06 1.41129e+07 136 1.41375e+07 1.11596e+07 0.00617529 1.40301e+07 49.8093 0.00604242 0.990734 0 50.3261 GTEX-1GN1W-0726-SM-9KNTV 1 B1 2 pieces; 10% tendon in 1, 30% fibrofatty and tendon in other 7.8 Muscle Muscle - Skeletal 0011907 298 523 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994617 212314 0.982666 0.995614 0.86566 20082 1 76 0.00236053 274 0 9.77002e+07 0.0171464 2.35107e+06 9.81306e+07 1.14321e+07 20090 4.8728e+07 0 0.117006 0.995614 0.861863 9.77002e+07 0.00299271 2.13536e+07 1.64003e+07 2.15981e+07 284 2.16134e+07 1.7482e+07 0.00267631 2.14203e+07 49.7756 0.0239586 0.996612 0 50.2847 GTEX-1GN1W-0926-SM-9WG66 1 B1 2 pieces; well trimmed; minimal plaque; small calcific focus 6.6 Blood Vessel Artery - Tibial 0007610 310 511 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991996 242177 0.975882 0.99426 0.845513 22066 1 76 0.00231445 284 0 1.03438e+08 0.0236532 718977 1.04035e+08 7.34482e+06 22091 5.14855e+07 0 0.13037 0.99426 0.84066 1.03438e+08 0.00337353 2.22157e+07 7.1098e+06 2.24445e+07 299 2.24615e+07 2.04834e+07 0.00284278 2.24184e+07 49.952 0.00691093 0.996525 0 50.2563 GTEX-1GN1W-1026-SM-9OSW2 1 B1 2 pieces; extensive alveolar hemorrhage in 1; atelectasis in other; foci of emphysema 8.2 Lung Lung 0008952 319 502 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991375 246020 0.969971 0.993791 0.78658 25389 1 76 0.00251701 209 0 9.06236e+07 0.0296934 592119 9.11898e+07 8.63543e+06 25430 4.51038e+07 0 0.183391 0.993791 0.781696 9.06236e+07 0.00357122 1.98312e+07 1.10199e+07 2.00947e+07 239 2.01219e+07 1.66583e+07 0.00304284 2.00074e+07 49.8573 0.00649326 0.996207 0 50.33 GTEX-1GN1W-1126-SM-9OSW3 1 B1 2 pieces; foci of acinar atrophy & fibrosis with PanIN-1A/B [arrowed]; excessive external fat up to 2.8 mm 7 Pancreas Pancreas 0001150 326 495 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.99122 317187 0.979285 0.993837 0.850569 22712 1 76 0.00264472 128 0 9.88371e+07 0.0204247 429958 9.94501e+07 9.97717e+06 22739 4.91834e+07 0 0.128717 0.993837 0.845326 9.88371e+07 0.00372374 2.2753e+07 2.38921e+07 2.29424e+07 165 2.2993e+07 2.88014e+07 0.00318281 2.29559e+07 49.9596 0.00432336 0.996453 0 50.2072 GTEX-1GN1W-1226-SM-9MQLW 1 B1 2 pieces; 2 mm lymph node in 1 piece (20%) 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 333 488 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985027 300865 0.977322 0.9875 0.828321 21871 1 76 0.00562895 148 0 6.93405e+07 0.0224753 1.3034e+06 7.02182e+07 8.49602e+06 21890 3.44986e+07 0 0.149002 0.9875 0.817967 6.93405e+07 0.00744024 1.51909e+07 9.34339e+06 1.55883e+07 167 1.5537e+07 8.99185e+06 0.00653233 1.53909e+07 49.7638 0.0185622 0.989974 0 50.6456 GTEX-1GN1W-1326-SM-9JGHZ 1 B1 2 pieces; all myometrium 8.2 Uterus Uterus 0000995 338 483 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993862 249506 0.969212 0.994951 0.773102 26009 1 76 0.00198004 290 0 1.19061e+08 0.0304916 464410 1.19665e+08 5.80038e+06 26059 5.93605e+07 0 0.196111 0.994951 0.769199 1.19061e+08 0.00280819 2.60656e+07 1.04522e+07 2.631e+07 321 2.62867e+07 2.05044e+07 0.00239366 2.62091e+07 49.9261 0.00388093 0.99604 0 50.2333 GTEX-1GN1W-1426-SM-9JGHP 1 B1 2 pieces; corpora albicantia occupy 50% 7.5 Ovary Ovary 0000992 343 478 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993492 297784 0.96327 0.994712 0.749496 25220 1 76 0.00195973 281 0 1.12293e+08 0.0364422 377925 1.1289e+08 4.91113e+06 25266 5.59744e+07 0 0.213775 0.994712 0.745532 1.12293e+08 0.00296069 2.4573e+07 1.12621e+07 2.47563e+07 291 2.47472e+07 1.96462e+07 0.0024596 2.47074e+07 49.9597 0.00334774 0.995932 0 50.1858 GTEX-1GN1W-1526-SM-7P8TG 1 B1 6 pieces; epithelium preserved 8.5 Vagina Vagina 0000996 351 470 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.947317 295377 0.97405 0.970798 0.792533 24544 1 76 0.00390648 148 0 8.2273e+07 0.025651 313813 8.47479e+07 1.14155e+07 24573 4.00274e+07 0 0.181517 0.970798 0.769389 8.2273e+07 0.00783492 1.79439e+07 1.12568e+07 1.79978e+07 162 1.90306e+07 1.54881e+07 0.00582319 1.88698e+07 49.7878 0.0037029 0.994278 0 50.0749 GTEX-1GN1W-1926-SM-7P8TH 1 B1 2 pieces; ductal and lobular units present; focus of lobular hyperplasia 8.1 Breast Breast - Mammary Tissue 0008367 380 441 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.943395 333858 0.965896 0.968437 0.757023 26290 1 76 0.00466197 145 0 8.40612e+07 0.0335937 364829 8.68009e+07 1.49374e+07 26328 4.08021e+07 0 0.208873 0.968437 0.733129 8.40612e+07 0.00790095 1.79044e+07 1.01587e+07 1.80742e+07 159 1.91868e+07 1.42673e+07 0.00623959 1.88688e+07 49.5822 0.00420306 0.993478 0 50.2359 GTEX-1GN1W-2026-SM-7P8TI 1 B1 6 pieces; muscularis with variable amounts of submucosa 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 384 437 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.945838 270476 0.970319 0.970409 0.80544 23924 1 76 0.00400462 168 0 7.94469e+07 0.0294169 980176 8.18695e+07 1.22785e+07 23948 3.86053e+07 0 0.164879 0.970409 0.781606 7.94469e+07 0.00801579 1.68933e+07 9.0199e+06 1.68556e+07 170 1.78027e+07 1.29179e+07 0.00595942 1.78197e+07 50.0238 0.0119724 0.994981 0 49.9441 GTEX-1GN1W-2126-SM-9JGI7 1 B1 5 pieces; 3 have mucosa and muscle, 2 have only muscle 5.8 Stomach Stomach 0000945 387 434 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992259 322466 0.974916 0.993519 0.813687 26851 1 76 0.00210419 404 0 1.40494e+08 0.0246828 2.42715e+06 1.4141e+08 7.2691e+06 26897 7.00197e+07 0 0.161229 0.993519 0.808413 1.40494e+08 0.00318154 3.13207e+07 5.50857e+07 3.19784e+07 406 3.18946e+07 2.4877e+07 0.00264218 3.1564e+07 49.7395 0.0171639 0.994779 0 50.5196 GTEX-1GN1W-2226-SM-9JGI5 1 B1 6 pieces; well preserved mucosa and submucosa 9.1 Esophagus Esophagus - Mucosa 0006920 398 423 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993344 414927 0.974158 0.994519 0.81864 24836 1 76 0.0020259 287 0 1.27209e+08 0.0255088 729965 1.2791e+08 6.51332e+06 24864 6.34165e+07 0 0.155518 0.994519 0.814153 1.27209e+08 0.00298256 2.83878e+07 1.66991e+07 2.8677e+07 329 2.86796e+07 2.61982e+07 0.00250367 2.85238e+07 49.8638 0.00570685 0.995693 0 50.2534 GTEX-1GN1W-2326-SM-9KNUI 1 B1 6 pieces; well dissected muscularis propria 7.9 Esophagus Esophagus - Muscularis 0004648 411 410 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993483 267133 0.974432 0.994568 0.817892 24193 1 76 0.00245242 291 0 1.25946e+08 0.0252549 1.07581e+06 1.26634e+08 1.46715e+07 24229 6.27871e+07 0 0.15654 0.994568 0.813449 1.25946e+08 0.00329408 2.73e+07 1.13199e+07 2.75488e+07 318 2.75201e+07 2.25991e+07 0.00287279 2.74546e+07 49.9405 0.00849544 0.995654 0 50.2269 GTEX-1GN1W-2426-SM-9KNUU 1 B1 6 pieces; 5% dermal fat; prominent sebaceous glands and hair follicles in some areas 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 421 400 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991625 417983 0.967465 0.992807 0.764634 25908 1 76 0.00254987 303 0 1.27614e+08 0.0322969 1.5897e+06 1.28539e+08 1.44096e+07 25963 6.36104e+07 0 0.202831 0.992807 0.759134 1.27614e+08 0.0034927 2.80745e+07 1.7e+07 2.83206e+07 324 2.83177e+07 2.05519e+07 0.00302072 2.82227e+07 49.916 0.0123674 0.993989 0 50.2182 GTEX-1GN1W-2526-SM-9JGHX 1 B1 2 pieces; well dissected glands with 5% skeletal muscle on edge 8 Salivary Gland Minor Salivary Gland 0006330 407 414 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.989485 149421 0.970527 0.991014 0.778535 24713 1 76 0.00465131 167 0 7.67747e+07 0.0287831 409441 7.74709e+07 9.54516e+06 24742 3.8217e+07 0 0.191992 0.991014 0.771539 7.67747e+07 0.00433494 1.69976e+07 1.29465e+07 1.74638e+07 173 1.74798e+07 1.23388e+07 0.00449337 1.70893e+07 49.4352 0.0052851 0.992542 0 50.6763 GTEX-1GN1W-5001-SM-AN46R B1 Heart Heart - Left Ventricle 0006566 243 ChIP-Seq GTEX-1GN2E-0001-SM-EYYVU B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 832 BP-56586 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.990515 730813 0.969893 0.992677 0.837171 21642 1 76 0.00244349 286 0 9.77645e+07 0.0285887 386912 9.84857e+07 3.48634e+06 21668 4.86098e+07 0 0.132722 0.992677 0.831041 9.77645e+07 0.00307762 2.17311e+07 1.40572e+07 2.19052e+07 256 2.19677e+07 2.39771e+07 0.00275987 2.18699e+07 49.8885 0.00392861 0.994839 0 50.1995 GTEX-1GN2E-0003-SM-7J3AB B1 Blood Whole Blood 0013756 832 BP-56590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2014 LCSET-6780,LCSET-7006 03/29/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GN2E-0003-SM-7MA6W B1 Blood Whole Blood 0013756 832 BP-56590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GN2E-0005-SM-ARU6L B1 8.5 Blood Whole Blood 0013756 832 BP-56568 RNA isolation_PAXgene Blood RNA (Manual) 09/15/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.974594 293201 0.986045 0.975747 0.792351 18206 1 76 0.0022513 117 0 9.13524e+07 0.0129945 188305 9.36231e+07 3.05457e+06 18218 4.5472e+07 0 0.193694 0.975747 0.773134 9.13524e+07 0.00294525 2.16031e+07 1.21454e+08 2.16633e+07 144 2.16996e+07 2.47284e+07 0.00259787 2.16759e+07 49.9726 0.00201131 0.976899 0 50.0695 GTEX-1GN2E-0011-R10a-SM-CE6RI B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 860 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990366 483727 0.965214 0.99184 0.836915 23433 1 76 0.00764096 268 0 8.52321e+07 0.0345203 5.11692e+06 8.59333e+07 1.32129e+07 23452 4.24281e+07 0 0.1283 0.99184 0.830085 8.52321e+07 0.00727252 1.85499e+07 1.86296e+07 1.88973e+07 265 1.88117e+07 8.00746e+06 0.00745701 1.87323e+07 49.8942 0.0595452 0.993314 0 50.4638 GTEX-1GN2E-0011-R1b-SM-CE6RJ B1, A1 6.2 Brain Brain - Hippocampus 0001954 860 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989439 326407 0.96785 0.99105 0.832625 21951 1 76 0.00780948 203 0 7.63425e+07 0.0319664 6.11059e+06 7.70319e+07 1.28189e+07 21967 3.79896e+07 0 0.135225 0.99105 0.825172 7.63425e+07 0.00738444 1.64342e+07 2.30219e+07 1.71125e+07 225 1.69089e+07 4.94639e+06 0.00759731 1.67115e+07 49.7064 0.0793254 0.99266 0 51.011 GTEX-1GN2E-0011-R2a-SM-9WG7D B1, A1 5.6 Brain Brain - Substantia nigra 0002038 860 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991086 198963 0.978181 0.99408 0.861871 20784 1 76 0.00218756 371 0 9.06778e+07 0.0217005 1.01819e+07 9.12179e+07 6.70223e+06 20794 4.51317e+07 0 0.11631 0.99408 0.856768 9.06778e+07 0.00339591 1.98074e+07 2.60209e+07 2.04599e+07 371 1.99511e+07 5.12648e+06 0.00278992 2.0499e+07 50.6773 0.111622 0.997074 0 50.8102 GTEX-1GN2E-0011-R5b-SM-CJI2M B1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 860 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990928 971928 0.964351 0.992592 0.819596 23114 1 76 0.00185715 371 0 1.06269e+08 0.0355054 9.21332e+06 1.07062e+08 6.75735e+06 23130 5.28922e+07 0 0.144755 0.992592 0.813524 1.06269e+08 0.00248345 2.23298e+07 5.03273e+07 2.34921e+07 385 2.32119e+07 7.59095e+06 0.00216978 2.27235e+07 49.4683 0.0860558 0.994257 0 51.2683 GTEX-1GN2E-0011-R6b-SM-9QEII B1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 860 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989974 349208 0.970768 0.993152 0.839349 22451 1 76 0.00161399 369 0 8.75826e+07 0.0290278 7.41651e+06 8.81865e+07 3.83357e+06 22467 4.35652e+07 0 0.131418 0.993152 0.833602 8.75826e+07 0.00380482 1.8964e+07 2.70578e+07 1.9253e+07 336 1.91239e+07 6.66562e+06 0.0027059 1.93009e+07 50.2303 0.0841003 0.99633 0 50.3781 GTEX-1GN2E-0011-R7b-SM-9QEIJ B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 860 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989742 381214 0.966949 0.993089 0.836716 21633 1 76 0.00169182 266 0 8.71605e+07 0.0329296 7.16276e+06 8.77671e+07 4.43933e+06 21645 4.3366e+07 0 0.130233 0.993089 0.830934 8.71605e+07 0.00370469 1.86934e+07 3.24454e+07 1.93314e+07 330 1.90629e+07 5.29795e+06 0.00269486 1.91719e+07 50.1426 0.081611 0.996437 0 50.8389 GTEX-1GN2E-0011-R8a-SM-CE6RK B1, A1 6.5 Brain Brain - Hypothalamus 0001898 860 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989804 435767 0.968783 0.991262 0.839641 23293 1 76 0.00772807 194 0 7.48063e+07 0.0310343 5.10517e+06 7.54657e+07 1.18667e+07 23306 3.72236e+07 0 0.129142 0.991262 0.832304 7.48063e+07 0.0072058 1.63167e+07 1.88048e+07 1.67158e+07 212 1.66321e+07 6.22122e+06 0.00746732 1.64772e+07 49.7661 0.0676489 0.992721 0 50.6041 GTEX-1GN2E-0011-R9b-SM-9WG7F B1, A1 5.9 Brain Brain - Spinal cord (cervical c-1) 0006469 860 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991144 208815 0.964881 0.994044 0.854697 20736 1 76 0.0021817 381 0 7.85064e+07 0.0349289 6.70055e+06 7.89768e+07 5.60984e+06 20748 3.90668e+07 0 0.110184 0.994044 0.849606 7.85064e+07 0.00339131 1.74119e+07 1.24443e+07 1.77668e+07 332 1.75185e+07 6.42375e+06 0.00278474 1.785e+07 50.4687 0.0848421 0.996943 0 50.5044 GTEX-1GN2E-0126-SM-9OSW8 1 B1 2 pieces, spermatogenesis appears reduced. 5.6 Testis Testis 0000473 864 1132 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989805 415401 0.923171 0.992212 0.708064 35075 1 76 0.00248218 289 0 1.19672e+08 0.0764604 958601 1.20612e+08 1.05962e+07 35153 5.95569e+07 0 0.215107 0.992212 0.70255 1.19672e+08 0.00374823 2.46691e+07 1.6747e+07 2.47797e+07 272 2.49197e+07 1.92758e+07 0.00311367 2.47803e+07 49.8597 0.00794784 0.994619 0 50.1119 GTEX-1GN2E-0226-SM-9WG6K 0 B1 6 pieces, squamous epithelium is ~35-45 microns, no dermal fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 875 1121 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990398 267192 0.97131 0.992992 0.771871 26372 1 76 0.00243847 304 0 1.0654e+08 0.0284113 384712 1.07292e+08 7.47304e+06 26425 5.30179e+07 0 0.199439 0.992992 0.766461 1.0654e+08 0.00376348 2.31234e+07 1.18822e+07 2.32957e+07 294 2.33772e+07 1.8332e+07 0.00309925 2.33038e+07 49.9213 0.00358564 0.995585 0 50.1856 GTEX-1GN2E-0326-SM-COH3C 0 B1 2 pieces, ~10-20% fascia/vascular elements, rep delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 876 1120 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992043 203288 0.976437 0.993474 0.817032 23136 1 76 0.00343012 171 0 7.73917e+07 0.0232399 441754 7.79001e+07 7.69404e+06 23159 3.85489e+07 0 0.159405 0.993474 0.8117 7.73917e+07 0.00466991 1.70086e+07 7.98441e+06 1.70844e+07 181 1.7073e+07 1.39616e+07 0.00404912 1.71299e+07 50.0832 0.00567078 0.994905 0 50.1111 GTEX-1GN2E-0426-SM-9MQKX 0 B1 6 pieces, squamous epithelium is ~40-50 microns; no dermal fat. 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 886 1110 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986107 181752 0.974491 0.988131 0.79659 23960 1 76 0.00573251 168 0 7.69495e+07 0.0252434 368703 7.78738e+07 9.45019e+06 23985 3.83099e+07 0 0.177901 0.988131 0.787135 7.69495e+07 0.00717898 1.67782e+07 9.28804e+06 1.69029e+07 160 1.69404e+07 1.32063e+07 0.00645426 1.68884e+07 49.9232 0.00473462 0.990154 0 50.1851 GTEX-1GN2E-0526-SM-9MQKC 0 B1 2 pieces, trace adherent fat. 7 Nerve Nerve - Tibial 0001323 888 1108 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.987054 292133 0.96741 0.989421 0.754035 24529 1 76 0.00404328 181 0 8.79844e+07 0.0322965 237266 8.89252e+07 7.80742e+06 24567 4.3762e+07 0 0.213375 0.989421 0.746058 8.79844e+07 0.00517775 1.92908e+07 8.49223e+06 1.94306e+07 195 1.94737e+07 1.39918e+07 0.00460916 1.94452e+07 49.9634 0.00266815 0.991787 0 50.1806 GTEX-1GN2E-0626-SM-9MQJR 0 B1 2 pieces, ~50-60% occlusive atherosis,(delineated) focally calcified 6.2 Blood Vessel Artery - Tibial 0007610 893 1103 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98221 247223 0.972178 0.984475 0.802195 21996 1 76 0.00555704 134 0 6.66607e+07 0.0274858 288527 6.7712e+07 7.95479e+06 22017 3.31364e+07 0 0.169983 0.984475 0.789741 6.66607e+07 0.00750162 1.42481e+07 6.35247e+06 1.4396e+07 143 1.4377e+07 1.20167e+07 0.0065271 1.44155e+07 50.0668 0.00426109 0.986739 0 50.2582 GTEX-1GN2E-0726-SM-9MQLU 0 B1 2 pieces, ~10% interstitial fat, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 895 1101 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987586 192667 0.984695 0.989206 0.875845 19307 1 76 0.00545947 125 0 7.02628e+07 0.015065 716377 7.10295e+07 8.41621e+06 19314 3.50084e+07 0 0.10885 0.989206 0.866391 7.02628e+07 0.00665629 1.53767e+07 7.00504e+06 1.55792e+07 144 1.56092e+07 1.47782e+07 0.0060569 1.54414e+07 49.7298 0.0100856 0.990826 0 50.3271 GTEX-1GN2E-0826-SM-9WYT8 1 B1 2 pieces, early multinodular goiter 6.5 Thyroid Thyroid 0002046 901 1095 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992553 205989 0.964786 0.993938 0.670374 25585 1 76 0.002579 271 0 9.96486e+07 0.0349524 653762 1.00256e+08 6.74172e+06 25652 4.96419e+07 0 0.294412 0.993938 0.66631 9.96486e+07 0.00426222 2.18739e+07 1.03236e+07 2.19636e+07 258 2.19984e+07 1.18987e+07 0.00341943 2.19685e+07 49.9659 0.0065209 0.995324 0 50.1024 GTEX-1GN2E-0926-SM-9WPOH 1 B1 2 pieces, centrilobular macrovesicular steatosis involves ~20-30% of parenchyma 6.7 Liver Liver 0001114 904 1092 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989481 198187 0.980884 0.990888 0.815733 20991 1 76 0.00618221 152 0 7.99317e+07 0.0189586 1.52957e+06 8.06667e+07 1.21903e+07 21010 3.98257e+07 0 0.165151 0.990888 0.8083 7.99317e+07 0.00638306 1.76389e+07 1.25294e+07 1.77367e+07 173 1.77493e+07 1.34322e+07 0.00628249 1.7726e+07 49.9671 0.0189616 0.992295 0 50.1383 GTEX-1GN2E-1126-SM-9MQK9 1 B1 6 pieces, atherosis up to ~0.3mm 6 Blood Vessel Artery - Aorta 0001496 914 1082 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98453 286609 0.966264 0.986641 0.740004 22305 1 76 0.005697 126 0 6.48857e+07 0.0333679 132856 6.57642e+07 7.3937e+06 22335 3.22425e+07 0 0.22626 0.986641 0.730118 6.48857e+07 0.00702435 1.39118e+07 5.83764e+06 1.39964e+07 133 1.40061e+07 1.00576e+07 0.00635925 1.40386e+07 50.058 0.00202019 0.988752 0 50.1517 GTEX-1GN2E-1326-SM-9KNVG 1 B1 2 pieces, moderate-marked chronic ischemic damage/interstitial fibrosis 5.8 Heart Heart - Left Ventricle 0006566 924 1072 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992819 149876 0.985835 0.99402 0.848135 21769 1 76 0.00224918 367 0 1.14601e+08 0.014091 9.32046e+06 1.15291e+08 1.31719e+07 21781 5.71587e+07 0 0.1377 0.99402 0.843064 1.14601e+08 0.00305948 2.48962e+07 4.38479e+07 2.59462e+07 334 2.56132e+07 5.66344e+06 0.00265384 2.53139e+07 49.7061 0.0808431 0.995221 0 51.0326 GTEX-1GN2E-1426-SM-7RHHI 1 B1 2 pieces, no abnormalities 7.1 Heart Heart - Atrial Appendage 0006631 929 1067 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990004 251441 0.96799 0.992899 0.755908 24191 1 76 0.00237896 202 0 9.76906e+07 0.0317053 1.17116e+06 9.83893e+07 9.46259e+06 24230 4.85808e+07 0 0.212082 0.992899 0.75054 9.76906e+07 0.00424439 2.09629e+07 8.70534e+06 2.10626e+07 234 2.11418e+07 1.61521e+07 0.00330896 2.11441e+07 50.0027 0.0119034 0.995793 0 50.1187 GTEX-1GN2E-1526-SM-7P8TD 1 B1 2 pieces, diffuse chronic congestive changes (alveolar hemosiderin-laden macrophages), moderate-marked 6.2 Lung Lung 0008952 933 1063 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.936873 261542 0.965824 0.964539 0.716194 25501 1 76 0.00419246 131 0 8.0494e+07 0.0339145 752044 8.34533e+07 1.2488e+07 25540 3.89419e+07 0 0.249629 0.964539 0.690797 8.0494e+07 0.00893159 1.70847e+07 1.02053e+07 1.71883e+07 157 1.83153e+07 9.92137e+06 0.00649406 1.81573e+07 49.7834 0.00901155 0.992204 0 50.1512 GTEX-1GN2E-2026-SM-9JGGG 2 B1 2 pieces. nodular hyperplastic glandular pattern 5.8 Prostate Prostate 0002367 946 1050 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991684 256284 0.97009 0.993009 0.800211 24643 1 76 0.00203047 373 0 1.19184e+08 0.029694 4.2014e+06 1.20023e+08 6.22929e+06 24685 5.93774e+07 0 0.169879 0.993009 0.794617 1.19184e+08 0.00321832 2.63862e+07 1.33768e+07 2.71104e+07 407 2.70652e+07 1.26056e+07 0.00262361 2.65848e+07 49.5523 0.0350049 0.994334 0 50.6768 GTEX-1GN2E-2226-SM-9WG6J 1 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 6.6 Breast Breast - Mammary Tissue 0008367 957 1039 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990424 241572 0.973738 0.993332 0.812475 26324 1 76 0.00246852 385 0 1.32831e+08 0.0258897 439929 1.33723e+08 1.03274e+07 26366 6.60824e+07 0 0.161262 0.993332 0.807057 1.32831e+08 0.00338637 2.91125e+07 1.33076e+07 2.94662e+07 339 2.95605e+07 2.58765e+07 0.0029261 2.93858e+07 49.8519 0.00328985 0.996239 0 50.3019 GTEX-1GN2E-2926-SM-7MXV3 2 B1 1 piece, partially shows moderate autolysis; mainly adenohypophysis with focal (~3mm) neurohypophysis (delineated) 6.7 Pituitary Pituitary 0000007 1002 994 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978047 192672 0.962365 0.987066 0.76306 24845 1 76 0.002955 153 0 7.66977e+07 0.0374054 701440 7.77027e+07 1.24013e+07 24878 3.79326e+07 0 0.199305 0.987066 0.753191 7.66977e+07 0.00405514 1.6137e+07 1.24546e+07 1.62014e+07 195 1.64864e+07 1.04819e+07 0.00350005 1.64734e+07 49.9803 0.00902723 0.996085 0 50.0995 GTEX-1GN2E-3026-SM-9WG6I 1 B1 2 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 1004 992 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991184 388672 0.967102 0.993976 0.832125 24411 1 76 0.00228217 371 0 1.19754e+08 0.0326422 6.70283e+06 1.20479e+08 8.6496e+06 24431 5.96056e+07 0 0.134977 0.993976 0.827112 1.19754e+08 0.00332343 2.61087e+07 2.78069e+07 2.66357e+07 341 2.63629e+07 1.13766e+07 0.00280134 2.66588e+07 50.2791 0.0556346 0.996767 0 50.4996 GTEX-1GN73-0002-SM-7J3AZ B1 Blood Whole Blood 0013756 700 BP-56590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2014 LCSET-6780 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GN73-0002-SM-7MA7C B1 Blood Whole Blood 0013756 700 BP-56590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/16/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GN73-0005-SM-ACKVI B1 9.2 Blood Whole Blood 0013756 700 BP-56568 RNA isolation_PAXgene Blood RNA (Manual) 09/15/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.979234 494728 0.974743 0.980611 0.743034 19734 1 76 0.00282689 199 0 1.04274e+08 0.0246364 199926 1.06336e+08 1.33787e+07 19754 5.19151e+07 0 0.231709 0.980611 0.728627 1.04274e+08 0.00399164 2.3793e+07 9.83985e+07 2.3854e+07 210 2.39006e+07 2.20726e+07 0.00340845 2.38963e+07 49.9955 0.00188014 0.981988 0 50.0639 GTEX-1GN73-0008-SM-EAZD6 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 889 BP-57227 RNA isolation_Trizol Manual (Cell Pellet) 10/16/2014 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.993064 301689 0.979233 0.993909 0.858489 20211 1 76 0.00171596 185 0 8.37043e+07 0.0204465 387206 8.42173e+07 6.55125e+06 20226 4.17337e+07 0 0.120744 0.993909 0.85326 8.37043e+07 0.00245561 1.86934e+07 1.08994e+07 1.88264e+07 186 1.87926e+07 2.21725e+07 0.00208547 1.87977e+07 50.0067 0.0045977 0.994754 0 50.1773 GTEX-1GN73-0011-R10b-SM-CKZNR B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 710 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990872 703065 0.964475 0.993343 0.84288 23156 1 76 0.00189495 154 0 6.36844e+07 0.0350743 1.63639e+06 6.41112e+07 5.42829e+06 23176 3.16571e+07 0 0.121595 0.993343 0.837268 6.36844e+07 0.00323243 1.39803e+07 6.88954e+06 1.40902e+07 184 1.4174e+07 8.45563e+06 0.00256203 1.40348e+07 49.7533 0.0255243 0.995813 0 50.1957 GTEX-1GN73-0011-R11b-SM-9OSX4 B1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 710 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991799 591088 0.951527 0.993757 0.773757 24810 1 76 0.00251082 272 0 1.11941e+08 0.048014 1.36415e+06 1.12644e+08 1.05446e+07 24848 5.57174e+07 0 0.17777 0.993757 0.768926 1.11941e+08 0.00345772 2.43012e+07 1.75812e+07 2.44608e+07 302 2.45462e+07 1.49843e+07 0.00298334 2.44183e+07 49.8693 0.0121103 0.995715 0 50.1637 GTEX-1GN73-0011-R1a-SM-CKZNT B1, A1 5.7 Brain Brain - Hippocampus 0001954 710 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.980433 568241 0.955514 0.982611 0.841511 23202 1 76 0.00196866 271 0 8.00733e+07 0.0442534 5.24086e+06 8.14903e+07 7.62532e+06 23218 3.98738e+07 0 0.114002 0.982611 0.826879 8.00733e+07 0.00324768 1.739e+07 2.32987e+07 1.78305e+07 324 1.77668e+07 7.82081e+06 0.00260675 1.76027e+07 49.768 0.0643127 0.98479 0 50.6253 GTEX-1GN73-0011-R2a-SM-CJI2V B1, A1 6.3 Brain Brain - Substantia nigra 0002038 710 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992627 1.11433e+06 0.970113 0.994076 0.837308 24357 1 76 0.00191983 377 0 1.08854e+08 0.0294791 4.87825e+06 1.09502e+08 7.13725e+06 24386 5.41866e+07 0 0.132805 0.994076 0.832348 1.08854e+08 0.00225097 2.38106e+07 1.92063e+07 2.45064e+07 359 2.44598e+07 1.47097e+07 0.00208516 2.39742e+07 49.4987 0.0445494 0.995525 0 50.7201 GTEX-1GN73-0011-R3b-SM-9QEIL B1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 710 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991073 341988 0.967901 0.993938 0.848274 24354 1 76 0.00166731 270 0 9.68226e+07 0.0316064 3.77587e+06 9.74131e+07 4.65733e+06 24373 4.81768e+07 0 0.119627 0.993938 0.843132 9.68226e+07 0.00363837 2.12996e+07 1.40738e+07 2.14475e+07 316 2.1542e+07 1.26108e+07 0.00265 2.14394e+07 49.8807 0.0387614 0.996803 0 50.1729 GTEX-1GN73-0011-R4b-SM-9QEIK B1, A1 7.1 Brain Brain - Amygdala 0001876 710 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990946 339744 0.96516 0.993811 0.848284 24033 1 76 0.00166918 271 0 8.95515e+07 0.0345309 4.66262e+06 9.01092e+07 4.34171e+06 24059 4.45678e+07 0 0.116875 0.993811 0.843034 8.95515e+07 0.00375055 1.9635e+07 1.68621e+07 1.98315e+07 315 1.98435e+07 1.03893e+07 0.00270687 1.98366e+07 49.9913 0.0517441 0.996676 0 50.2489 GTEX-1GN73-0011-R5a-SM-9QEIM B1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 710 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990465 503981 0.963226 0.99342 0.831365 24762 1 76 0.00169558 273 0 1.0591e+08 0.0363379 3.00108e+06 1.06612e+08 5.31211e+06 24788 5.26942e+07 0 0.131861 0.99342 0.825894 1.0591e+08 0.003658 2.31549e+07 2.00714e+07 2.33262e+07 314 2.33941e+07 1.40337e+07 0.00267387 2.33559e+07 49.9591 0.0281496 0.996375 0 50.1843 GTEX-1GN73-0011-R6b-SM-CJI2T B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 710 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992825 1.55635e+06 0.961199 0.994153 0.820641 25782 1 76 0.00197375 376 0 1.23082e+08 0.0381668 2.98764e+06 1.23806e+08 7.78646e+06 25812 6.12546e+07 0 0.140559 0.994153 0.815842 1.23082e+08 0.00229823 2.6915e+07 2.18166e+07 2.7097e+07 342 2.73264e+07 1.88775e+07 0.00213578 2.68362e+07 49.5475 0.0241316 0.995481 0 50.1685 GTEX-1GN73-0011-R7a-SM-CJI2U B1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 710 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992362 1.43491e+06 0.962632 0.993944 0.822388 24681 1 76 0.00190283 375 0 1.11959e+08 0.037046 4.93946e+06 1.12641e+08 6.76582e+06 24707 5.57092e+07 0 0.140244 0.993944 0.817408 1.11959e+08 0.00239453 2.42018e+07 3.05003e+07 2.48087e+07 361 2.48575e+07 1.32694e+07 0.00214829 2.43009e+07 49.4338 0.0438511 0.995527 0 50.6191 GTEX-1GN73-0011-R8b-SM-CKZNY B1, A1 6.4 Brain Brain - Hypothalamus 0001898 710 BP-69190 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991889 639235 0.960134 0.994017 0.828419 25302 1 76 0.00194176 274 0 8.91583e+07 0.0395244 2.54797e+06 8.96949e+07 8.52673e+06 25331 4.4385e+07 0 0.131715 0.994017 0.823462 8.91583e+07 0.00318983 1.9487e+07 1.36794e+07 1.97535e+07 323 1.98122e+07 1.16159e+07 0.00256446 1.95995e+07 49.7302 0.0284071 0.996145 0 50.3396 GTEX-1GN73-0011-R9a-SM-CKZO5 B1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 710 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992438 711660 0.962901 0.994542 0.82363 25922 1 76 0.00187429 381 0 1.27692e+08 0.0366031 2.79982e+06 1.28393e+08 1.15086e+07 25957 6.3584e+07 0 0.139271 0.994542 0.819134 1.27692e+08 0.00320205 2.81136e+07 1.62969e+07 2.832e+07 341 2.83744e+07 1.85159e+07 0.00253677 2.83001e+07 49.9345 0.0218066 0.996645 0 50.1828 GTEX-1GN73-0126-SM-CNPPT 0 B1 2 fragmented pieces; 5% internal fat 8.7 Muscle Muscle - Skeletal 0011907 885 545 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.987916 371169 0.984613 0.990389 0.866346 21479 1 76 0.00517384 273 0 1.143e+08 0.0150472 1.07638e+06 1.1541e+08 2.82504e+07 21496 5.68807e+07 0 0.118268 0.990389 0.858019 1.143e+08 0.00771774 2.48566e+07 1.77191e+07 2.50978e+07 295 2.51704e+07 2.32918e+07 0.00644261 2.50283e+07 49.8584 0.00932657 0.992862 0 50.2414 GTEX-1GN73-0226-SM-9WG67 1 B1 6 pieces; up to 30% subcutaneous tissue 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 889 541 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991037 196225 0.973974 0.993582 0.79976 23968 1 76 0.00252095 201 0 7.94026e+07 0.0257672 402474 7.99155e+07 6.18874e+06 23996 3.95138e+07 0 0.174214 0.993582 0.794627 7.94026e+07 0.00349691 1.7251e+07 8.72389e+06 1.74036e+07 190 1.74581e+07 1.40101e+07 0.00300768 1.73874e+07 49.8985 0.00503624 0.996127 0 50.2202 GTEX-1GN73-0326-SM-9KNTW 1 B1 2 pieces; 20% & 60% fibrovascular & neural content 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 892 538 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994374 176092 0.975772 0.995364 0.815744 23301 1 76 0.00245948 279 0 9.4249e+07 0.0238871 514228 9.46879e+07 1.02745e+07 23329 4.69793e+07 0 0.160028 0.995364 0.811962 9.4249e+07 0.00329696 2.04989e+07 9.13766e+06 2.07024e+07 277 2.06933e+07 1.67627e+07 0.0028778 2.06005e+07 49.8877 0.00543076 0.996354 0 50.247 GTEX-1GN73-0426-SM-9KNVJ 1 B1 2 pieces; 10% & 20% internal fat content 7 Nerve Nerve - Tibial 0001323 894 536 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993058 273451 0.96434 0.994214 0.746352 26168 1 76 0.00250035 292 0 1.38653e+08 0.0353889 645782 1.3946e+08 1.4956e+07 26241 6.91023e+07 0 0.217988 0.994214 0.742033 1.38653e+08 0.00348608 3.02815e+07 1.3828e+07 3.05088e+07 325 3.04851e+07 1.99209e+07 0.00299264 3.04534e+07 49.974 0.0046306 0.995369 0 50.1869 GTEX-1GN73-0526-SM-9WG68 1 B1 2 pieces; well trimmed; no plaques 7.6 Blood Vessel Artery - Tibial 0007610 896 534 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992123 215840 0.974488 0.994184 0.82291 22818 1 76 0.00240131 378 0 1.15438e+08 0.025136 504371 1.16113e+08 8.45133e+06 22850 5.74678e+07 0 0.151578 0.994184 0.818124 1.15438e+08 0.00330307 2.47269e+07 9.12266e+06 2.49742e+07 334 2.49793e+07 2.15562e+07 0.00285126 2.49443e+07 49.9649 0.00434378 0.996246 0 50.2488 GTEX-1GN73-0626-SM-7PC3I 1 B1 2 pieces; 10% fibrous content in 1 piece 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 896 534 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.989184 376064 0.977934 0.991912 0.813319 23863 1 76 0.00343328 281 0 9.68958e+07 0.0217343 307339 9.76859e+07 1.59112e+07 23896 4.8145e+07 0 0.164614 0.991912 0.806741 9.68958e+07 0.00444861 2.13374e+07 1.08681e+07 2.16244e+07 266 2.17449e+07 1.76415e+07 0.00393955 2.14732e+07 49.6856 0.0031462 0.99464 0 50.334 GTEX-1GN73-0726-SM-7P8TJ 1 B1 6 pieces; well trimmed; no internal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 897 533 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.949316 252774 0.972502 0.972029 0.787151 23962 1 76 0.00442763 189 0 8.75084e+07 0.0272146 369473 9.00265e+07 1.44373e+07 23996 4.26089e+07 0 0.185351 0.972029 0.765134 8.75084e+07 0.00784502 1.86532e+07 1.21931e+07 1.88178e+07 190 1.98503e+07 1.4745e+07 0.0060964 1.95946e+07 49.6759 0.00410405 0.994743 0 50.2197 GTEX-1GN73-0826-SM-9OSW4 1 B1 2 pieces; scattered lymphoid collections consistent with lymphocytic thyroiditis (Hashimoto thyroiditis) 6.9 Thyroid Thyroid 0002046 899 531 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990326 303277 0.967001 0.99248 0.727503 25572 1 76 0.00294901 274 0 1.01283e+08 0.0319906 503545 1.02051e+08 9.9869e+06 25622 5.03655e+07 0 0.239497 0.99248 0.722033 1.01283e+08 0.00374419 2.22193e+07 1.27742e+07 2.24565e+07 265 2.25503e+07 1.40819e+07 0.00334573 2.23302e+07 49.7549 0.00493426 0.994635 0 50.2655 GTEX-1GN73-1026-SM-9KNV9 1 B1 2 pieces; moderate pulmonary edema and congestion; scattered foci of pigmented alveolar macrophages 7.2 Lung Lung 0008952 905 525 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992315 212336 0.971337 0.993346 0.731094 23874 1 76 0.0027732 205 0 9.23465e+07 0.0283266 361542 9.2965e+07 1.0534e+07 23919 4.6017e+07 0 0.240243 0.993346 0.726229 9.23465e+07 0.00346082 2.03459e+07 9.07785e+06 2.04737e+07 246 2.04775e+07 1.33083e+07 0.00311666 2.04333e+07 49.946 0.00388901 0.994378 0 50.1566 GTEX-1GN73-1126-SM-9OSW5 1 B1 2 pieces; <5% macrovesicular steatosis; focal hemorrhages 6.5 Liver Liver 0001114 907 523 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989594 309388 0.979065 0.992756 0.845112 21743 1 76 0.00237593 270 0 1.13952e+08 0.0207986 3.81522e+06 1.14783e+08 1.12042e+07 21761 5.66918e+07 0 0.133953 0.992756 0.83899 1.13952e+08 0.00340248 2.50418e+07 1.75696e+07 2.53648e+07 327 2.54115e+07 1.68522e+07 0.00288757 2.53107e+07 49.9007 0.0332384 0.995918 0 50.3203 GTEX-1GN73-1526-SM-9WPP1 2 B1 2 pieces; 30 & 50% internal fat & vascular content 7.3 Adrenal Gland Adrenal Gland 0002369 915 515 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98842 242401 0.972559 0.990154 0.835531 21752 1 76 0.00620187 136 0 6.86408e+07 0.0271879 1.23297e+06 6.93234e+07 1.08884e+07 21767 3.41865e+07 0 0.137028 0.990154 0.827304 6.86408e+07 0.00689425 1.49125e+07 1.17481e+07 1.51582e+07 155 1.51521e+07 1.07589e+07 0.00654746 1.50304e+07 49.7983 0.0177858 0.991888 0 50.4085 GTEX-1GN73-1626-SM-9WYTS 1 B1 2 pieces; glands' autolysis varies from 1 to 2 7.4 Prostate Prostate 0002367 918 512 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993342 274047 0.973343 0.994688 0.806957 24758 1 76 0.00248232 274 0 1.0073e+08 0.0262727 493710 1.01268e+08 7.07636e+06 24790 5.01828e+07 0 0.166385 0.994688 0.802671 1.0073e+08 0.00417672 2.18938e+07 8.43239e+06 2.21533e+07 289 2.21273e+07 1.71759e+07 0.00332838 2.2053e+07 49.9159 0.0048753 0.996035 0 50.2946 GTEX-1GN73-1726-SM-9JGFR 2 B1 2 pieces; spermatogenesis; several foci, up to 2 mm of fibrosis and Leydig cell hyperplasia [marked] 6 Testis Testis 0000473 920 510 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992894 375437 0.949672 0.994188 0.732283 34798 1 76 0.00206424 381 0 1.49555e+08 0.0500648 1.81364e+06 1.50429e+08 7.06264e+06 34904 7.45372e+07 0 0.217389 0.994188 0.728027 1.49555e+08 0.00307898 3.21986e+07 2.08657e+07 3.2504e+07 357 3.24917e+07 2.0551e+07 0.00257095 3.23781e+07 49.9124 0.0120565 0.995482 0 50.236 GTEX-1GN73-1926-SM-9JGGS 1 B1 6 pieces; well dissected 7.2 Esophagus Esophagus - Mucosa 0006920 927 503 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993837 460967 0.970164 0.995006 0.764312 25671 1 76 0.0020418 377 0 1.2955e+08 0.0295859 395039 1.302e+08 6.75035e+06 25711 6.45685e+07 0 0.205851 0.995006 0.760496 1.2955e+08 0.00291829 2.86993e+07 1.34121e+07 2.89532e+07 366 2.89336e+07 2.17104e+07 0.00247953 2.88666e+07 49.9421 0.0030341 0.996175 0 50.2202 GTEX-1GN73-2026-SM-9WYTT 1 B1 6 pieces; well dissected 7.4 Esophagus Esophagus - Muscularis 0004648 929 501 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993487 204068 0.974098 0.99467 0.792989 22736 1 76 0.00252856 207 0 9.13709e+07 0.0256275 638190 9.18606e+07 6.80068e+06 22767 4.55205e+07 0 0.181109 0.99467 0.788763 9.13709e+07 0.00417848 1.96209e+07 7.09819e+06 1.98749e+07 242 1.98407e+07 1.47829e+07 0.00335254 1.97587e+07 49.8964 0.00694738 0.995853 0 50.3216 GTEX-1GN73-2226-SM-9YFLF 1 B1 6 pieces; mild flat plaques 6.8 Blood Vessel Artery - Aorta 0001496 932 498 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.99345 158086 0.975577 0.994638 0.799015 21776 1 76 0.0025235 139 0 6.56412e+07 0.0239776 152748 6.5995e+07 2.31286e+06 21794 3.26981e+07 0 0.176561 0.994638 0.794731 6.56412e+07 0.00358102 1.42103e+07 6.03597e+06 1.43288e+07 152 1.43106e+07 1.19418e+07 0.00305163 1.43078e+07 49.9952 0.00231454 0.995827 0 50.2076 GTEX-1GN73-2326-SM-9MQKV 1 B1 2 pieces; <5% fat content 7.8 Heart Heart - Atrial Appendage 0006631 935 495 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98587 345110 0.978639 0.988074 0.837593 21238 1 76 0.00546649 129 0 7.3192e+07 0.0210448 1.40356e+06 7.40754e+07 9.18916e+06 21258 3.64245e+07 0 0.141046 0.988074 0.827605 7.3192e+07 0.00677055 1.55768e+07 8.15801e+06 1.58832e+07 164 1.58921e+07 1.21942e+07 0.00611707 1.56972e+07 49.6915 0.0189477 0.990278 0 50.487 GTEX-1GN73-2426-SM-7RHFQ 1 B1 2 pieces; areas of hypereosinophilia suggest ischemia, but no clear-cut signs of infarction; 10% internal fat in 1 piece 7.4 Heart Heart - Left Ventricle 0006566 935 495 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.96907 7.04589e+06 0.76612 0.971051 0.563893 22046 1 76 0.00197717 194 0 1.09828e+08 0.232364 5.55301e+06 1.13102e+08 9.61179e+06 22070 5.46533e+07 0 0.202227 0.971051 0.547568 1.09828e+08 0.00325909 1.88537e+07 2.95956e+08 1.94132e+07 235 1.9489e+07 1.08002e+07 0.00261682 1.90234e+07 49.3955 0.0490972 0.973031 0 50.731 GTEX-1GN73-2626-SM-9KNUQ 2 B1 6 pieces; largely autolyzed mucosa, intact muscularis 7.1 Colon Colon - Transverse 0001157 939 491 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993772 169792 0.971807 0.994795 0.799552 23598 1 76 0.00258731 276 0 1.01545e+08 0.0279507 713144 1.02076e+08 1.2228e+07 23640 5.06178e+07 0 0.172254 0.994795 0.795391 1.01545e+08 0.0031821 2.19266e+07 8.98534e+06 2.21778e+07 287 2.21398e+07 1.58445e+07 0.0028844 2.20651e+07 49.9155 0.00698642 0.995818 0 50.2847 GTEX-1GN73-2726-SM-9WYUB 1 B1 6 pieces; well dissected muscularis propria 6.6 Colon Colon - Sigmoid 0001159 939 491 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993687 104946 0.974182 0.995144 0.82914 20858 1 76 0.00221211 132 0 6.14238e+07 0.0256029 502127 6.17235e+07 3.94708e+06 20873 3.06081e+07 0 0.145042 0.995144 0.825114 6.14238e+07 0.00440296 1.32361e+07 4.90908e+06 1.34078e+07 148 1.33685e+07 1.02709e+07 0.00330593 1.33598e+07 49.9838 0.0081351 0.996602 0 50.3223 GTEX-1GN73-2926-SM-9JGHT 1 B1 1 piece; anterior lobe is 85%, posterior is 15% [marked] 7.4 Pituitary Pituitary 0000007 967 463 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993786 421541 0.969919 0.994919 0.788313 27531 1 76 0.00200266 377 0 1.43009e+08 0.0297315 802684 1.43739e+08 7.20467e+06 27595 7.12861e+07 0 0.181607 0.994919 0.784307 1.43009e+08 0.00287529 2.86823e+07 1.51795e+07 2.89909e+07 341 2.90074e+07 2.51499e+07 0.00243848 2.88094e+07 49.8288 0.00558431 0.996052 0 50.2675 GTEX-1GN73-3026-SM-7MXV8 1 B1 1 large & 1 small fragmented piece 7.4 Brain Brain - Cerebellum 0002037 968 462 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.978648 151536 0.954258 0.987012 0.739493 23304 1 76 0.00310832 124 0 7.06898e+07 0.0453928 988551 7.16201e+07 1.16932e+07 23331 3.49691e+07 0 0.214766 0.987012 0.729888 7.06898e+07 0.00409703 1.53365e+07 1.01484e+07 1.53565e+07 161 1.56001e+07 8.76628e+06 0.00359849 1.56375e+07 50.0598 0.0138027 0.995375 0 50.0327 GTEX-1GN73-3126-SM-9KNTY 1 B1 2 pieces; meninges along 1 edge 6.8 Brain Brain - Cortex 0001870 970 460 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993706 330103 0.964606 0.994833 0.802254 25459 1 76 0.00238051 271 0 1.11612e+08 0.0350785 3.95776e+06 1.12192e+08 1.19391e+07 25492 5.56352e+07 0 0.162352 0.994833 0.798109 1.11612e+08 0.0033571 2.45329e+07 1.96674e+07 2.46525e+07 322 2.46156e+07 1.26422e+07 0.00286825 2.46824e+07 50.0678 0.0352767 0.99596 0 50.1216 GTEX-1GPI6-0004-SM-DINCR B1 Blood Whole Blood 0013756 1195 BP-56738 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/22/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1GPI6-0004-SM-DLION B1 Blood Whole Blood 0013756 1195 BP-56738 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/22/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1GPI6-0005-SM-ADEGT B1 7.7 Blood Whole Blood 0013756 1195 BP-56797 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.957733 548459 0.975788 0.96415 0.809064 18375 1 76 0.00341173 133 0 9.73663e+07 0.0232185 223511 1.00987e+08 9.70711e+06 18385 4.81959e+07 0 0.166724 0.96415 0.780059 9.73663e+07 0.00391869 2.26268e+07 1.2916e+08 2.28354e+07 159 2.31328e+07 2.63377e+07 0.00366352 2.29558e+07 49.808 0.00221327 0.970567 0 50.2294 GTEX-1GPI6-0011-R5a-SM-CJI2W B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1187 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.98915 925250 0.964733 0.990894 0.821683 21700 1 76 0.00240428 368 0 9.68601e+07 0.0351365 1.19063e+07 9.77502e+07 5.5584e+06 21716 4.81955e+07 0 0.14305 0.990894 0.8142 9.68601e+07 0.00321981 2.04444e+07 5.56655e+07 2.14739e+07 386 2.10815e+07 5.93524e+06 0.00281133 2.09514e+07 49.8452 0.121803 0.992637 0 51.2279 GTEX-1GPI6-0126-SM-9WG69 0 B1 6 pieces, trace dermal fat, squamous epithelium is ~35-45 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1280 601 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.98905 342239 0.968234 0.992027 0.756364 26761 1 76 0.00269197 386 0 1.25494e+08 0.0314782 1.06335e+06 1.26502e+08 9.45514e+06 26814 6.24122e+07 0 0.21187 0.992027 0.750333 1.25494e+08 0.00369543 2.74502e+07 1.32842e+07 2.77096e+07 340 2.78059e+07 2.00415e+07 0.00319219 2.7703e+07 49.9073 0.00840578 0.995003 0 50.2351 GTEX-1GPI6-0326-SM-9MQM6 0 B1 2 pieces, 10-15% interstitial fat; rep delineated 7.4 Muscle Muscle - Skeletal 0011907 1299 582 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986034 205504 0.982101 0.987861 0.871597 20000 1 76 0.00566382 129 0 7.55373e+07 0.0176342 969485 7.64655e+07 9.29327e+06 20010 3.76259e+07 0 0.110504 0.987861 0.861016 7.55373e+07 0.00708318 1.62655e+07 8.35743e+06 1.65387e+07 153 1.65243e+07 1.51748e+07 0.00637219 1.63904e+07 49.7966 0.0126787 0.989688 0 50.4165 GTEX-1GPI6-0426-SM-7PBZI 0 B1 2 pieces, no adherent fat 7.3 Nerve Nerve - Tibial 0001323 1303 578 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.986281 162223 0.969653 0.990587 0.766392 24554 1 76 0.00300452 181 0 8.73146e+07 0.0299896 208866 8.81444e+07 1.20653e+07 24594 4.3355e+07 0 0.203262 0.990587 0.759177 8.73146e+07 0.00506863 1.90859e+07 8.0067e+06 1.92667e+07 194 1.93842e+07 1.44461e+07 0.00403209 1.93289e+07 49.9285 0.00236959 0.994893 0 50.2357 GTEX-1GPI6-0526-SM-9MQKR 0 B1 2 pieces, minimal atherosis, no adherent fat. 7.3 Blood Vessel Artery - Tibial 0007610 1305 576 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984712 276731 0.973128 0.987089 0.835149 20985 1 76 0.00571774 127 0 6.63724e+07 0.0265412 341255 6.72406e+07 8.45352e+06 20993 3.3011e+07 0 0.137979 0.987089 0.824366 6.63724e+07 0.00730466 1.41179e+07 5.91652e+06 1.42863e+07 137 1.42601e+07 1.30247e+07 0.00650929 1.42982e+07 50.0667 0.00507514 0.989465 0 50.2965 GTEX-1GPI6-0626-SM-7RHHJ 0 B1 2 pieces mainly fibroadipose tissue; trace ductal elements, delineated 6.2 Breast Breast - Mammary Tissue 0008367 1318 563 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990278 169527 0.970906 0.992699 0.758139 25511 1 76 0.00270521 212 0 9.8406e+07 0.0287702 565622 9.91297e+07 9.70984e+06 25557 4.8945e+07 0 0.212768 0.992699 0.752604 9.8406e+07 0.00408501 2.15472e+07 1.04229e+07 2.17706e+07 247 2.17967e+07 1.53208e+07 0.00339343 2.17502e+07 49.9466 0.00570588 0.99512 0 50.2578 GTEX-1GPI6-1926-SM-9KNV7 0 B1 6 pieces, dermal fat focally present; ~1mm, delineated; squamous epithelium is ~40-50 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1394 487 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992456 373313 0.967001 0.993712 0.719398 25386 1 76 0.00275 290 0 1.18335e+08 0.0326969 633649 1.19084e+08 1.30154e+07 25453 5.89526e+07 0 0.247603 0.993712 0.714874 1.18335e+08 0.00391531 2.58785e+07 1.53416e+07 2.60052e+07 312 2.60297e+07 1.84925e+07 0.00333192 2.59956e+07 49.9672 0.00532101 0.994968 0 50.1221 GTEX-1GPI6-2126-SM-9JGGH 1 B1 1 piece, mainly adenohypophysis; ~2.5x1mm focus of neurohypophysis, delineated 6.5 Pituitary Pituitary 0000007 1423 458 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992621 322734 0.960929 0.993769 0.764338 26613 1 76 0.00215035 373 0 1.14866e+08 0.0388019 1.89703e+06 1.15586e+08 5.64107e+06 26671 5.72554e+07 0 0.196591 0.993769 0.759575 1.14866e+08 0.00303341 2.34285e+07 1.58007e+07 2.38035e+07 340 2.37721e+07 1.59409e+07 0.00259137 2.35812e+07 49.7983 0.0164122 0.994918 0 50.397 GTEX-1GPI7-0002-SM-DINAX B1 Blood Whole Blood 0013756 -117 BP-56738 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/22/2014 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1GPI7-0002-SM-DLIOU B1 Blood Whole Blood 0013756 -117 BP-56738 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/22/2014 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1GPI7-0005-SM-A9G13 B1 8.4 Blood Whole Blood 0013756 -117 BP-56797 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984425 1.34045e+06 0.925826 0.990011 0.774432 19518 1 76 0.00375622 129 0 7.58134e+07 0.0738829 362791 7.65784e+07 6.88726e+06 19527 3.76226e+07 0 0.151394 0.990011 0.766696 7.58134e+07 0.00406922 1.59518e+07 6.40459e+07 1.62834e+07 139 1.64475e+07 1.46513e+07 0.00390978 1.62033e+07 49.6262 0.00473751 0.995596 0 50.5143 GTEX-1GPI7-0126-SM-9MQL8 1 B1 6 pieces; well trimmed, minimal internal fat, epidermis measures 35 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 357 1239 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985849 271215 0.971881 0.988035 0.804686 22678 1 76 0.00543097 159 0 6.0721e+07 0.0278708 489630 6.14563e+07 7.17054e+06 22708 3.02015e+07 0 0.167196 0.988035 0.795058 6.0721e+07 0.00709531 1.321e+07 6.22391e+06 1.33945e+07 138 1.3397e+07 1.01123e+07 0.0062613 1.33356e+07 49.8852 0.00796713 0.990222 0 50.3469 GTEX-1GPI7-0226-SM-9MQKB 1 B1 2 pieces; mature fat, one piece includes about 10% fibrous tissue/vessels 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 366 1230 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987216 240420 0.978164 0.989247 0.830834 22202 1 76 0.0054544 149 0 7.14857e+07 0.0215633 480841 7.22628e+07 8.52859e+06 22218 3.55888e+07 0 0.14733 0.989247 0.8219 7.14857e+07 0.00682417 1.56103e+07 6.89776e+06 1.58448e+07 156 1.5853e+07 1.29835e+07 0.00613788 1.57378e+07 49.8175 0.00665406 0.991278 0 50.3728 GTEX-1GPI7-0326-SM-7MKH6 1 B1 2 pieces; ~50% is salivary gland, remainder is lip/stroma/skeletal muscle/fat 7.5 Salivary Gland Minor Salivary Gland 0006330 368 1228 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.977363 339929 0.970517 0.985132 0.780749 25208 1 76 0.00426636 208 0 8.65218e+07 0.0287061 363736 8.78276e+07 1.43338e+07 25242 4.27595e+07 0 0.189768 0.985132 0.76914 8.65218e+07 0.00485956 1.88434e+07 1.1126e+07 1.9184e+07 208 1.94937e+07 1.4572e+07 0.00456062 1.91725e+07 49.5846 0.00414148 0.9929 0 50.4478 GTEX-1GPI7-0426-SM-7RHHP 0 B1 2 pieces; skeletal muscle with small component of fat/tendon 8.5 Muscle Muscle - Skeletal 0011907 393 1203 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.992083 162468 0.985882 0.994523 0.880928 19245 1 76 0.00199682 279 0 1.09602e+08 0.0139046 1.8025e+06 1.10206e+08 9.57896e+06 19256 5.45896e+07 0 0.104954 0.994523 0.876103 1.09602e+08 0.00359114 2.38735e+07 1.79564e+07 2.39128e+07 307 2.39687e+07 2.02951e+07 0.00279202 2.40408e+07 50.0751 0.0163558 0.996964 0 50.0411 GTEX-1GPI7-0626-SM-9MQKF 0 B1 2 pieces; well trimmed 7.7 Blood Vessel Artery - Tibial 0007610 384 1212 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98591 276177 0.976871 0.988223 0.861122 19828 1 76 0.00550184 136 0 6.51856e+07 0.0226906 277662 6.59625e+07 8.08778e+06 19836 3.2434e+07 0 0.115749 0.988223 0.85098 6.51856e+07 0.0070749 1.38629e+07 5.01654e+06 1.40497e+07 141 1.40344e+07 1.33009e+07 0.00628652 1.40223e+07 49.9785 0.00420939 0.990535 0 50.3347 GTEX-1GPI7-0726-SM-9WG84 0 B1 2 pieces 7.3 Thyroid Thyroid 0002046 396 1200 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.993109 150167 0.963604 0.994792 0.753672 22708 1 76 0.0023671 115 0 5.8506e+07 0.0361063 173879 5.88123e+07 4.064e+06 22735 2.91426e+07 0 0.209932 0.994792 0.749747 5.8506e+07 0.00302978 1.27459e+07 5.97185e+06 1.28286e+07 125 1.28513e+07 9.73736e+06 0.00269788 1.28145e+07 49.9284 0.00295651 0.996475 0 50.1617 GTEX-1GPI7-0826-SM-9JGG7 0 B1 2 pieces; lobulated fat 8.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 412 1184 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994016 496808 0.977782 0.995185 0.830304 25016 1 76 0.00182218 387 0 1.67504e+08 0.0219549 1.20384e+06 1.68314e+08 8.07934e+06 25054 8.35264e+07 0 0.147479 0.995185 0.826306 1.67504e+08 0.00263009 3.68311e+07 1.94657e+07 3.71537e+07 357 3.71735e+07 2.9103e+07 0.00222566 3.69918e+07 49.8775 0.00715235 0.996354 0 50.218 GTEX-1GPI7-0926-SM-7PC3J 1 B1 2 pieces; 20-30% fat, remainder is dense stroma with focus of ductal epithelium with apocrine and cystic change 6.9 Breast Breast - Mammary Tissue 0008367 414 1182 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.986203 387468 0.977279 0.990324 0.836462 24172 1 76 0.00369402 380 0 1.09268e+08 0.0224559 852863 1.10336e+08 1.83496e+07 24196 5.42091e+07 0 0.140816 0.990324 0.828369 1.09268e+08 0.00506352 2.38449e+07 1.16568e+07 2.41125e+07 331 2.42524e+07 1.91727e+07 0.00437592 2.41298e+07 49.8733 0.0077297 0.994445 0 50.279 GTEX-1GPI7-1026-SM-7MGY2 0 B1 6 pieces; mucosa, not muscularis 10 Esophagus Esophagus - Mucosa 0006920 434 1162 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6755 04/12/2015 TruSeq.v1 RNASEQ 0.989783 172087 0.975488 0.991636 0.834162 21853 1 76 0.00269739 140 0 6.83928e+07 0.0240106 351454 6.89697e+07 5.47408e+06 21865 3.40734e+07 0 0.141326 0.991636 0.827185 6.83928e+07 0.00345531 1.54718e+07 1.0466e+07 1.55692e+07 147 1.56197e+07 1.46803e+07 0.00307564 1.55431e+07 49.8772 0.00509578 0.99349 0 50.1568 GTEX-1GPI7-1326-SM-9KNVA 1 B1 6 pieces; full thickness sections 7.7 Stomach Stomach 0000945 457 1139 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994325 264237 0.976458 0.995313 0.835614 23574 1 76 0.00232307 289 0 1.06905e+08 0.023161 664551 1.07408e+08 1.18944e+07 23597 5.32989e+07 0 0.140844 0.995313 0.831698 1.06905e+08 0.0031664 2.3296e+07 9.88939e+06 2.35125e+07 290 2.35077e+07 2.05029e+07 0.00274432 2.33982e+07 49.8832 0.00618715 0.9963 0 50.2313 GTEX-1GPI7-1426-SM-9JGGR 1 B1 2 pieces; active spermatogenesis 6.6 Testis Testis 0000473 462 1134 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992443 447894 0.921509 0.993559 0.723101 34544 1 76 0.00200078 296 0 1.29232e+08 0.0780908 1.06687e+06 1.3007e+08 6.78357e+06 34628 6.44292e+07 0 0.198409 0.993559 0.718443 1.29232e+08 0.00276484 2.64869e+07 2.01387e+07 2.66748e+07 306 2.67306e+07 2.20559e+07 0.00238238 2.65535e+07 49.8338 0.0082023 0.994675 0 50.1767 GTEX-1GPI7-1526-SM-9JGG8 1 B1 2 pieces; some collapse, bronchopneumonia 7.6 Lung Lung 0008952 466 1130 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.990245 117812 0.971468 0.991961 0.785441 23394 1 76 0.00442954 120 0 5.76468e+07 0.0282417 392368 5.81139e+07 7.31758e+06 23418 2.87048e+07 0 0.186027 0.991961 0.779127 5.76468e+07 0.00403492 1.26632e+07 5.51472e+06 1.29361e+07 127 1.29261e+07 9.45865e+06 0.00423257 1.27641e+07 49.6847 0.0067517 0.993677 0 50.533 GTEX-1GPI7-1626-SM-7P8TN 1 B1 2 pieces; one piece has good admixture of stroma and glands, second is predominantly stroma 6.7 Prostate Prostate 0002367 478 1118 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.940329 190411 0.964078 0.967301 0.768472 25139 1 76 0.00463723 113 0 6.30182e+07 0.0357232 581726 6.51485e+07 1.08747e+07 25165 3.0531e+07 0 0.195606 0.967301 0.743344 6.30182e+07 0.00818446 1.33474e+07 7.72452e+06 1.33569e+07 132 1.42039e+07 8.34472e+06 0.00636139 1.41382e+07 49.8842 0.00892923 0.994273 0 50.0179 GTEX-1GPI7-1726-SM-7P8R1 1 B1 6 pieces; muscularis (target is full thickness) - can be compared to sigmoid colon specimen 7.4 Colon Colon - Transverse 0001157 483 1113 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990514 300782 0.971495 0.992562 0.798973 25428 1 76 0.00287462 276 0 1.03588e+08 0.0276472 1.31559e+06 1.04364e+08 1.3449e+07 25476 5.15436e+07 0 0.172522 0.992562 0.79303 1.03588e+08 0.00420233 2.27632e+07 1.50078e+07 2.30468e+07 292 2.30633e+07 1.43388e+07 0.0035371 2.29319e+07 49.8571 0.0126058 0.994611 0 50.3096 GTEX-1GPI7-1826-SM-9KNU1 0 B1 5 pieces; well trimmed, scant internal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 488 1108 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992742 273108 0.969828 0.993871 0.767118 24155 1 76 0.0025597 282 0 1.00229e+08 0.0300173 970177 1.00847e+08 1.18089e+07 24194 4.9964e+07 0 0.20271 0.993871 0.762417 1.00229e+08 0.00324043 2.20312e+07 1.4277e+07 2.24545e+07 289 2.23851e+07 1.46487e+07 0.00289968 2.22094e+07 49.8029 0.00962029 0.995 0 50.4757 GTEX-1GPI7-1926-SM-9KNUH 1 B1 6 pieces; muscularis with trace residual mucosa and attached fat 7.4 Colon Colon - Sigmoid 0001159 493 1103 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993625 251443 0.969894 0.99466 0.783315 24054 1 76 0.00257722 281 0 1.001e+08 0.0298461 606772 1.00638e+08 1.20152e+07 24096 4.98928e+07 0 0.18658 0.99466 0.779132 1.001e+08 0.00322028 2.16616e+07 1.09428e+07 2.19827e+07 287 2.1945e+07 1.56054e+07 0.00289842 2.17971e+07 49.831 0.00602927 0.995695 0 50.3678 GTEX-1GTWX-0001-SM-7J3A5 B1 Blood Whole Blood 0013756 915 BP-56798 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GTWX-0001-SM-7MA6I B1 Blood Whole Blood 0013756 915 BP-56798 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GTWX-0003-SM-EYYVV B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 915 BP-56809 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986635 498801 0.968726 0.990554 0.808082 20743 1 76 0.00229005 129 0 6.77237e+07 0.0306092 252040 6.83695e+07 2.61855e+06 20765 3.3631e+07 0 0.160644 0.990554 0.800449 6.77237e+07 0.00369588 1.49824e+07 7.98672e+06 1.50889e+07 135 1.51898e+07 1.57319e+07 0.00299019 1.51378e+07 49.9143 0.00368644 0.994473 0 50.1771 GTEX-1GTWX-0006-SM-ARZL3 B1 7.8 Blood Whole Blood 0013756 915 BP-56797 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.96147 554317 0.976559 0.964248 0.802776 17121 1 76 0.00251665 87 0 6.37735e+07 0.0229114 118554 6.61381e+07 2.24936e+06 17123 3.15454e+07 0 0.173783 0.964248 0.774075 6.37735e+07 0.00415467 1.48106e+07 9.96755e+07 1.52225e+07 112 1.55129e+07 1.89389e+07 0.0033333 1.47138e+07 48.6781 0.00179252 0.967025 0 50.6857 GTEX-1GTWX-0011-R10b-SM-CJI2X B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 875 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992833 1.21923e+06 0.965893 0.99407 0.836198 24939 1 76 0.00231652 374 0 1.222e+08 0.0336732 4.23233e+06 1.22929e+08 7.81612e+06 24971 6.08413e+07 0 0.129695 0.99407 0.831239 1.222e+08 0.00266429 2.65398e+07 2.33725e+07 2.70496e+07 352 2.7099e+07 1.52751e+07 0.00249019 2.66082e+07 49.5431 0.0344292 0.995308 0 50.4757 GTEX-1GTWX-0011-R11b-SM-C1YQJ B1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 875 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.986125 672218 0.952011 0.989126 0.756567 24120 1 76 0.00230071 200 0 8.67915e+07 0.047543 1.35739e+06 8.77456e+07 4.06816e+06 24157 4.31094e+07 0 0.195444 0.989126 0.74834 8.67915e+07 0.00276998 1.86228e+07 1.0455e+07 1.9024e+07 254 1.90873e+07 1.10662e+07 0.00253463 1.87806e+07 49.5951 0.0154696 0.992127 0 50.5328 GTEX-1GTWX-0011-R1a-SM-CE6RL B1, A1 6.6 Brain Brain - Hippocampus 0001954 875 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98932 395126 0.968192 0.99105 0.843749 22846 1 76 0.00823878 199 0 7.99948e+07 0.0316079 4.34028e+06 8.07173e+07 1.27514e+07 22862 3.9799e+07 0 0.124443 0.99105 0.836197 7.99948e+07 0.00795103 1.74021e+07 1.78068e+07 1.78442e+07 216 1.77674e+07 6.20479e+06 0.00809515 1.75773e+07 49.7311 0.0537714 0.992779 0 50.6272 GTEX-1GTWX-0011-R2b-SM-ADEH5 B1, A1 6.7 Brain Brain - Substantia nigra 0002038 875 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982526 604746 0.965174 0.989011 0.833444 24055 1 76 0.00368052 281 0 1.07767e+08 0.0345343 5.67004e+06 1.08964e+08 1.1093e+07 24085 5.3401e+07 0 0.13173 0.989011 0.824285 1.07767e+08 0.00352099 2.33582e+07 1.96453e+07 2.40768e+07 322 2.41648e+07 1.26815e+07 0.00360128 2.38709e+07 49.6941 0.052036 0.995496 0 50.7574 GTEX-1GTWX-0011-R3b-SM-CJI2Z B1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 875 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99266 1.34787e+06 0.964603 0.994082 0.833971 24971 1 76 0.0022252 374 0 1.19025e+08 0.034979 4.31504e+06 1.19733e+08 7.28742e+06 24995 5.92407e+07 0 0.130633 0.994082 0.829035 1.19025e+08 0.00288729 2.58632e+07 2.43542e+07 2.63081e+07 354 2.63545e+07 1.49446e+07 0.00255577 2.59519e+07 49.6152 0.0360387 0.995504 0 50.4264 GTEX-1GTWX-0011-R4a-SM-C1YQI B1, A1 5.6 Brain Brain - Amygdala 0001876 875 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98752 514096 0.965942 0.990181 0.839998 23620 1 76 0.00226705 371 0 9.84376e+07 0.0337739 5.91782e+06 9.94137e+07 4.41749e+06 23638 4.89649e+07 0 0.125943 0.990181 0.83175 9.84376e+07 0.0027674 2.12949e+07 2.51176e+07 2.17967e+07 340 2.16289e+07 9.84714e+06 0.00251655 2.16756e+07 50.0539 0.0595272 0.992842 0 50.5822 GTEX-1GTWX-0011-R5b-SM-CKZO6 B1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 875 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99246 604300 0.958055 0.994426 0.816999 24456 1 76 0.00232161 269 0 8.64441e+07 0.0415838 2.93964e+06 8.69286e+07 8.5592e+06 24478 4.3046e+07 0 0.141056 0.994426 0.812445 8.64441e+07 0.003337 1.87235e+07 1.67761e+07 1.90014e+07 283 1.90685e+07 1.08056e+07 0.0028283 1.88105e+07 49.6595 0.0338168 0.996392 0 50.3683 GTEX-1GTWX-0011-R6a-SM-A96RN B1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 875 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.994048 462688 0.96141 0.995284 0.825521 24547 1 76 0.00217744 269 0 9.3035e+07 0.0381778 3.31727e+06 9.34759e+07 3.04127e+06 24574 4.63662e+07 0 0.135889 0.995284 0.821627 9.3035e+07 0.00251431 2.02789e+07 1.51929e+07 2.04707e+07 278 2.04244e+07 1.19634e+07 0.00234567 2.04218e+07 49.9968 0.035488 0.996519 0 50.2353 GTEX-1GTWX-0011-R7a-SM-A96RO B1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 875 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99239 583486 0.965139 0.993875 0.838481 23141 1 76 0.002307 268 0 8.06346e+07 0.0345889 3.50436e+06 8.11315e+07 2.63094e+06 23156 4.0164e+07 0 0.126658 0.993875 0.833346 8.06346e+07 0.00272823 1.75263e+07 1.81158e+07 1.78098e+07 266 1.77201e+07 8.66717e+06 0.0025173 1.77139e+07 49.9913 0.0431936 0.995361 0 50.4012 GTEX-1GTWX-0011-R8a-SM-CE6RM B1, A1 7.5 Brain Brain - Hypothalamus 0001898 875 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989635 723635 0.962868 0.991042 0.82527 25623 1 76 0.0082334 271 0 1.03198e+08 0.0367859 3.56462e+06 1.04131e+08 1.64983e+07 25653 5.13517e+07 0 0.137598 0.991042 0.817877 1.03198e+08 0.00779157 2.25239e+07 1.99368e+07 2.28545e+07 281 2.28434e+07 1.26735e+07 0.0080128 2.26556e+07 49.7937 0.0342321 0.992448 0 50.3643 GTEX-1GTWX-0011-R9a-SM-ADEH4 B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 875 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982979 561173 0.959048 0.989306 0.79433 23633 1 76 0.00356265 407 0 1.20338e+08 0.0405408 2.43113e+06 1.21638e+08 1.34675e+07 23663 5.96284e+07 0 0.164718 0.989306 0.785835 1.20338e+08 0.00323359 2.64313e+07 1.29124e+07 2.70643e+07 334 2.71861e+07 1.74662e+07 0.00339917 2.69827e+07 49.8123 0.0199865 0.995632 0 50.5917 GTEX-1GTWX-0126-SM-9YFLK 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50-60 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1037 978 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992077 388164 0.969038 0.99375 0.775039 25517 1 76 0.00263451 386 0 1.22845e+08 0.0307505 745521 1.23618e+08 4.63489e+06 25556 6.11935e+07 0 0.193999 0.99375 0.770195 1.22845e+08 0.00370457 2.6824e+07 1.30853e+07 2.71227e+07 355 2.71112e+07 2.0054e+07 0.00316864 2.70312e+07 49.9261 0.00603087 0.995422 0 50.2768 GTEX-1GTWX-0226-SM-9YFLL 0 B1 2 pieces, fascia elements are ~40%, rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1038 977 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993109 277801 0.973798 0.994556 0.854895 23592 1 76 0.00239533 378 0 1.09128e+08 0.0259578 559008 1.09726e+08 3.94513e+06 23619 5.43652e+07 0 0.118903 0.994556 0.850241 1.09128e+08 0.00376488 2.36975e+07 1.09322e+07 2.39705e+07 375 2.38645e+07 2.0185e+07 0.00307911 2.39692e+07 50.1095 0.0050946 0.996004 0 50.2864 GTEX-1GTWX-0326-SM-9WYTP 0 B1 2 pieces, interstitial fat/vascular elements are ~5-10% tissue 8.2 Muscle Muscle - Skeletal 0011907 1038 977 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994581 380023 0.981059 0.995695 0.853774 20239 1 76 0.00238364 272 0 1.01253e+08 0.0187515 775624 1.01691e+08 6.62622e+06 20258 5.04795e+07 0 0.127285 0.995695 0.850099 1.01253e+08 0.00399306 2.20753e+07 1.25529e+07 2.22863e+07 277 2.22627e+07 1.99064e+07 0.00318745 2.21928e+07 49.9214 0.00762727 0.996808 0 50.2379 GTEX-1GTWX-0426-SM-9MQM1 0 B1 2 pieces, no adherent fat 7.2 Nerve Nerve - Tibial 0001323 1039 976 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984916 171626 0.967682 0.986821 0.764378 23493 1 76 0.00570464 158 0 7.41391e+07 0.0320321 248854 7.51292e+07 8.80282e+06 23524 3.69103e+07 0 0.203304 0.986821 0.754304 7.41391e+07 0.00682873 1.62598e+07 7.17138e+06 1.64033e+07 152 1.6422e+07 1.16908e+07 0.0062656 1.63747e+07 49.9279 0.00331235 0.988725 0 50.2197 GTEX-1GTWX-0526-SM-9YFL1 0 B1 2 pieces, no significant atherosis or adherent fat; prominent Monckeberg mediial sclerosis, rep delineated 6.1 Blood Vessel Artery - Tibial 0007610 1039 976 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.989592 382598 0.974557 0.992865 0.819521 23472 1 76 0.00288275 377 0 1.29755e+08 0.0250708 372482 1.30687e+08 1.44619e+07 23500 6.45209e+07 0 0.155036 0.992865 0.813674 1.29755e+08 0.00507721 2.79078e+07 1.13784e+07 2.8135e+07 376 2.82234e+07 2.43594e+07 0.00397636 2.82219e+07 49.9987 0.00285018 0.996138 0 50.2027 GTEX-1GTWX-0626-SM-9WYU1 1 B1 2 pieces, moderate congestion 6.2 Lung Lung 0008952 1133 882 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992647 213865 0.971524 0.993894 0.740536 24341 1 76 0.00272864 159 0 8.15046e+07 0.0281649 261496 8.20054e+07 5.57788e+06 24378 4.0588e+07 0 0.230988 0.993894 0.736014 8.15046e+07 0.0046916 1.7931e+07 9.02588e+06 1.80925e+07 182 1.80643e+07 1.16773e+07 0.00370889 1.80589e+07 49.9926 0.00318877 0.99514 0 50.2242 GTEX-1GTWX-0726-SM-9WPPA 1 B1 2 pieces, no abnormalitites, focal adhereant fat, delineated 6.8 Thyroid Thyroid 0002046 1152 863 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986465 247770 0.965557 0.988342 0.725425 23912 1 76 0.00652812 118 0 6.87854e+07 0.0341663 187289 6.95967e+07 1.08288e+07 23950 3.42317e+07 0 0.240132 0.988342 0.716969 6.87854e+07 0.00700048 1.50134e+07 8.52664e+06 1.5114e+07 127 1.51434e+07 1.02702e+07 0.00676385 1.51065e+07 49.939 0.00269106 0.990219 0 50.1671 GTEX-1GTWX-0926-SM-9MQKM 1 B1 2 pieces, ~40-50% clot (delineated) 6 Heart Heart - Atrial Appendage 0006631 1160 855 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984513 431452 0.965429 0.98697 0.731573 24116 1 76 0.00567731 122 0 7.28404e+07 0.0343628 795591 7.38021e+07 8.52149e+06 24150 3.62145e+07 0 0.233856 0.98697 0.722041 7.28404e+07 0.00751208 1.5511e+07 1.0785e+07 1.5688e+07 143 1.57008e+07 1.03877e+07 0.00659241 1.56666e+07 49.9455 0.0107801 0.989426 0 50.2835 GTEX-1GTWX-1026-SM-7P8QW 1 B1 2 pieces, moderate chronic ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 1172 843 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.970117 319443 0.973538 0.972219 0.788432 24461 1 76 0.00361458 266 0 1.03474e+08 0.0262824 2.47996e+06 1.06431e+08 1.61679e+07 24497 5.1491e+07 0 0.185106 0.972219 0.766529 1.03474e+08 0.00433209 2.23811e+07 2.05424e+07 2.33902e+07 287 2.32866e+07 9.96455e+06 0.00397256 2.26469e+07 49.3037 0.0233011 0.974322 0 51.1024 GTEX-1GTWX-1326-SM-9JGHU 1 B1 6 pieces, squamous mucosa is up to ~0.4mm, ~40-50% thickness 5.6 Esophagus Esophagus - Mucosa 0006920 1183 832 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993948 130715 0.968785 0.995183 0.783525 22698 1 76 0.00221709 113 0 4.16359e+07 0.0310394 328652 4.18374e+07 2.22083e+06 22710 2.07479e+07 0 0.185259 0.995183 0.779752 4.16359e+07 0.00334011 9.2252e+06 4.98259e+06 9.3228e+06 118 9.30211e+06 6.17544e+06 0.0027779 9.29515e+06 49.9813 0.00785545 0.996419 0 50.2631 GTEX-1GTWX-1526-SM-9MQLF 1 B1 2 pieces, only trace fascia elements 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1191 824 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985491 275427 0.97603 0.987648 0.798934 22544 1 76 0.00569177 125 0 6.51666e+07 0.0236596 211000 6.59816e+07 7.82256e+06 22563 3.2418e+07 0 0.177096 0.987648 0.789066 6.51666e+07 0.00728943 1.42491e+07 7.4333e+06 1.44541e+07 140 1.447e+07 1.08978e+07 0.00648886 1.43712e+07 49.8286 0.00319786 0.989806 0 50.357 GTEX-1GTWX-1826-SM-9QEHG 1 B1 6 pieces, glomeruli present, tubules with mild-moderate autolysis 5.9 Kidney Kidney - Cortex 0001225 1200 815 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.98934 158854 0.973516 0.992767 0.839317 23234 1 76 0.00227761 198 0 7.7358e+07 0.0262919 3.29228e+06 7.79216e+07 4.00939e+06 23259 3.84727e+07 0 0.134199 0.992767 0.833246 7.7358e+07 0.0044079 1.70556e+07 9.71157e+06 1.73306e+07 241 1.73442e+07 8.95695e+06 0.00333908 1.72646e+07 49.885 0.0422512 0.996193 0 50.4 GTEX-1GTWX-2026-SM-9YFLM 0 B1 6 pieces, trace dermal fat, delineated; squamous epithelium is is ~40-50 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1215 800 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536,LCSET-7768 08/26/2015 TruSeq.v1 RNASEQ 0.990113 412461 0.969323 0.992295 0.755514 26188 1 76 0.00275617 390 0 1.47429e+08 0.0304254 905689 1.48574e+08 1.22906e+07 26251 7.34095e+07 0 0.213808 0.992295 0.749693 1.47429e+08 0.0032154 3.24041e+07 1.86335e+07 3.26208e+07 357 3.26854e+07 2.2945e+07 0.00298528 3.26376e+07 49.9634 0.00609589 0.994476 0 50.1666 GTEX-1GTWX-2226-SM-9JGHD 2 B1 2 pieces, spermatogenesis appears reduced 5.8 Testis Testis 0000473 1235 780 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.989583 208585 0.914541 0.991141 0.665046 31543 1 76 0.00413154 115 0 5.63521e+07 0.0852024 679243 5.68558e+07 6.13902e+06 31599 2.80547e+07 0 0.249495 0.991141 0.659154 5.63521e+07 0.00413659 1.14848e+07 8.74817e+06 1.16736e+07 105 1.16981e+07 7.47246e+06 0.00413406 1.15374e+07 49.6543 0.0119468 0.992699 0 50.4076 GTEX-1GTWX-2526-SM-9JGHG 0 B1 1 piece, ~60% glandular elements (rep delineated), rest is interstitial/adherent fat. Evidence of remote sialadenitis with scarring 7.7 Salivary Gland Minor Salivary Gland 0006330 1254 761 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.990759 318636 0.972214 0.99196 0.760868 25485 1 76 0.00260711 402 0 1.24415e+08 0.0261777 277020 1.25423e+08 6.23303e+06 25535 6.19158e+07 0 0.211346 0.99196 0.754751 1.24415e+08 0.00342112 2.78469e+07 2.36975e+07 2.82163e+07 341 2.82692e+07 2.05094e+07 0.00301362 2.79341e+07 49.7019 0.00220869 0.993162 0 50.3295 GTEX-1GTWX-2626-SM-9WPOT 1 B1 6 pieces, confirmed target muscularis 5.9 Colon Colon - Sigmoid 0001159 1255 760 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987619 174520 0.970811 0.989403 0.801095 23768 1 76 0.00647684 137 0 7.45568e+07 0.0289342 424270 7.53553e+07 1.19056e+07 23796 3.7115e+07 0 0.169715 0.989403 0.792606 7.45568e+07 0.00726569 1.61177e+07 8.20949e+06 1.62929e+07 151 1.62893e+07 1.19214e+07 0.00687055 1.62456e+07 49.9329 0.00563026 0.991187 0 50.2703 GTEX-1GTWX-2926-SM-7MXV4 1 B1 2 pieces, no abnormalities 6.1 Brain Brain - Cerebellum 0002037 1355 660 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976096 286154 0.938797 0.985288 0.72705 23545 1 76 0.00342169 124 0 6.73567e+07 0.0609337 1.35478e+06 6.83625e+07 1.0768e+07 23568 3.32956e+07 0 0.211747 0.985288 0.716353 6.73567e+07 0.00448174 1.42645e+07 2.0661e+07 1.4373e+07 149 1.45833e+07 6.86016e+06 0.00394677 1.461e+07 50.0457 0.0198175 0.99448 0 50.1894 GTEX-1GTWX-3026-SM-9MQL4 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cortex 0001870 1357 658 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 EXCLUDE 0.985721 239902 0.956679 0.987941 0.751355 23115 1 76 0.00580772 135 0 6.49595e+07 0.0430966 1.406e+06 6.57525e+07 7.85036e+06 23143 3.23133e+07 0 0.205324 0.987941 0.742295 6.49595e+07 0.00747485 1.41173e+07 5.93138e+06 1.44706e+07 144 1.43749e+07 7.32752e+06 0.00663941 1.4341e+07 49.941 0.0213832 0.99016 0 50.6179 GTEX-1GTWX-3126-SM-9WG7V 1 B1 1 piece, mainly adenohypophysis; ~2mm nubbin of neurohypophysis, delineated 7.4 Pituitary Pituitary 0000007 1355 660 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991302 379872 0.966211 0.993586 0.743115 26740 1 76 0.00258699 276 0 1.35041e+08 0.0335075 428130 1.35913e+08 1.02213e+07 26806 6.72117e+07 0 0.223096 0.993586 0.738349 1.35041e+08 0.00350175 2.86056e+07 1.74869e+07 2.87856e+07 318 2.88941e+07 2.18785e+07 0.00304332 2.87832e+07 49.9039 0.00315004 0.99587 0 50.1568 GTEX-1GZ2Q-0002-SM-7J3AK B1 Blood Whole Blood 0013756 1079 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6780 02/22/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GZ2Q-0002-SM-7MA6O B1 Blood Whole Blood 0013756 1079 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GZ2Q-0005-SM-ARL71 B1 8.1 Blood Whole Blood 0013756 1079 BP-56999 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.98997 1.8481e+06 0.920403 0.990558 0.718309 18550 1 76 0.00207282 111 0 6.83414e+07 0.0791291 472929 6.89928e+07 3.01131e+06 18561 3.39422e+07 0 0.202094 0.990558 0.711527 6.83414e+07 0.00265659 1.47373e+07 8.57836e+07 1.48782e+07 118 1.50685e+07 1.45603e+07 0.00236453 1.46333e+07 49.2673 0.00685476 0.991146 0 50.2378 GTEX-1GZ2Q-0011-R10b-SM-CE6RN B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 1080 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.991119 686304 0.96433 0.992189 0.854289 24152 1 76 0.0076516 270 0 9.81408e+07 0.0351002 4.27027e+06 9.89134e+07 1.53427e+07 24172 4.88529e+07 0 0.110041 0.992189 0.847616 9.81408e+07 0.00678415 2.15486e+07 1.43667e+07 2.17178e+07 286 2.17657e+07 1.38326e+07 0.00721834 2.15956e+07 49.8039 0.0431718 0.993259 0 50.1955 GTEX-1GZ2Q-0011-R11a-SM-A8N7T B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 1080 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985391 559276 0.944493 0.988 0.737942 26202 1 76 0.0104285 270 0 1.23988e+08 0.0550811 3.28283e+06 1.25494e+08 2.03752e+07 26240 6.15793e+07 0 0.206552 0.988 0.729087 1.23988e+08 0.0112172 2.65505e+07 2.44744e+07 2.69233e+07 306 2.70088e+07 1.41412e+07 0.0108218 2.6758e+07 49.7668 0.0261592 0.99061 0 50.3486 GTEX-1GZ2Q-0011-R1a-SM-CJI2Y B1, A1 6.7 Brain Brain - Hippocampus 0001954 1080 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993223 1.14086e+06 0.962821 0.994506 0.841818 24115 1 76 0.00196027 373 0 9.81361e+07 0.0367585 5.41816e+06 9.86782e+07 6.42887e+06 24139 4.88579e+07 0 0.121003 0.994506 0.837194 9.81361e+07 0.00226075 2.14323e+07 1.7358e+07 2.18664e+07 350 2.19527e+07 1.26081e+07 0.00211032 2.14571e+07 49.4291 0.0549073 0.99579 0 50.5013 GTEX-1GZ2Q-0011-R2b-SM-9OSWO B1, A1 5.7 Brain Brain - Substantia nigra 0002038 1080 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992111 284452 0.97802 0.9945 0.871397 22383 1 76 0.00226914 375 0 1.23035e+08 0.0218005 1.37527e+07 1.23715e+08 1.24217e+07 22398 6.1267e+07 0 0.106623 0.9945 0.866605 1.23035e+08 0.00315831 2.70885e+07 3.0847e+07 2.79436e+07 361 2.76819e+07 1.00218e+07 0.00271266 2.75585e+07 49.8883 0.111165 0.99689 0 50.7769 GTEX-1GZ2Q-0011-R3a-SM-A96RP B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1080 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992908 578964 0.957616 0.994296 0.844179 23061 1 76 0.0017652 271 0 7.92294e+07 0.0419141 5.50625e+06 7.96839e+07 2.72065e+06 23081 3.94759e+07 0 0.113437 0.994296 0.839364 7.92294e+07 0.00201056 1.73468e+07 1.7027e+07 1.7592e+07 271 1.75863e+07 9.89153e+06 0.00188771 1.7452e+07 49.8083 0.0691011 0.995684 0 50.3509 GTEX-1GZ2Q-0011-R5a-SM-A96RQ B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 1080 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993702 924898 0.946417 0.994932 0.813797 23776 1 76 0.00181185 268 0 8.81207e+07 0.0532021 5.51869e+06 8.85696e+07 2.83184e+06 23795 4.39182e+07 0 0.132619 0.994932 0.809673 8.81207e+07 0.00205966 1.89872e+07 2.93134e+07 1.92793e+07 282 1.92157e+07 1.01343e+07 0.0019356 1.9159e+07 49.9261 0.0623091 0.996162 0 50.3816 GTEX-1GZ2Q-0011-R6a-SM-9OSWM B1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1080 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990945 459402 0.961678 0.993668 0.847956 23383 1 76 0.00235267 267 0 8.67892e+07 0.037996 7.80126e+06 8.73422e+07 8.30924e+06 23399 4.31861e+07 0 0.113722 0.993668 0.842587 8.67892e+07 0.0035079 1.89866e+07 1.92822e+07 1.92144e+07 293 1.92687e+07 9.32878e+06 0.0029287 1.91443e+07 49.838 0.0893183 0.996391 0 50.2982 GTEX-1GZ2Q-0011-R7b-SM-9OSWN B1, A1 7.2 Brain Brain - Putamen (basal ganglia) 0001874 1080 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992471 793248 0.962443 0.99451 0.830812 24784 1 76 0.00237269 376 0 1.47697e+08 0.0372803 1.27132e+07 1.48512e+08 1.39565e+07 24816 7.35501e+07 0 0.13163 0.99451 0.826251 1.47697e+08 0.00314999 3.21483e+07 4.14171e+07 3.28197e+07 350 3.27715e+07 1.48278e+07 0.00276055 3.24599e+07 49.7612 0.0856039 0.996549 0 50.5167 GTEX-1GZ2Q-0011-R8a-SM-CE6RO B1, A1 5.6 Brain Brain - Hypothalamus 0001898 1080 BP-69186 RNA isolation_PAXgene Tissue miRNA 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989993 413202 0.96694 0.99158 0.847723 23389 1 76 0.00731939 158 0 7.23616e+07 0.0326985 5.30044e+06 7.2976e+07 1.0287e+07 23408 3.60071e+07 0 0.119217 0.99158 0.840586 7.23616e+07 0.00750057 1.6013e+07 1.16659e+07 1.61555e+07 189 1.61513e+07 8.07798e+06 0.00740983 1.61116e+07 49.9385 0.0726326 0.993167 0 50.2214 GTEX-1GZ2Q-0011-R9a-SM-9WG7A B1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 1080 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991406 368665 0.963975 0.994119 0.830462 23509 1 76 0.0023954 392 0 1.07564e+08 0.0356998 5.67257e+06 1.082e+08 7.98496e+06 23535 5.35317e+07 0 0.133513 0.994119 0.825578 1.07564e+08 0.00332202 2.37977e+07 1.34574e+07 2.43337e+07 339 2.42182e+07 1.40029e+07 0.00285744 2.41754e+07 49.9558 0.0524267 0.996832 0 50.5567 GTEX-1GZ2Q-0126-SM-9WG6M 0 B1 6 pieces; hair bearing skin with 20% to 40% dermal fat 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1090 1280 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.98896 257461 0.967734 0.991626 0.715418 24253 1 76 0.00275789 149 0 7.65172e+07 0.0320496 604549 7.71633e+07 6.08198e+06 24286 3.80396e+07 0 0.252316 0.991626 0.709428 7.65172e+07 0.00385294 1.67624e+07 9.58818e+06 1.69333e+07 159 1.69744e+07 1.15556e+07 0.00330394 1.69273e+07 49.9306 0.00783467 0.994293 0 50.2535 GTEX-1GZ2Q-0226-SM-7P8TL 1 B1 6 pieces; benign keratosis and 20% to 40% intradermal fat and empty spaces, ~34 microns thick epidermis 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1094 1276 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.922277 261934 0.971313 0.957818 0.756519 24331 1 76 0.00428045 139 0 6.88599e+07 0.0284625 627457 7.18925e+07 1.11788e+07 24357 3.30358e+07 0 0.214794 0.957818 0.724607 6.88599e+07 0.00985562 1.45157e+07 9.70293e+06 1.45385e+07 133 1.58051e+07 1.09498e+07 0.0069646 1.57029e+07 49.8379 0.00872772 0.993359 0 50.0392 GTEX-1GZ2Q-0326-SM-9WG6N 1 B1 2 pieces; mature adipose tissue with fibrovascular component and one piece with vessel wall (outlined) up to ~3mm in thickness 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1097 1273 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.98931 191803 0.977812 0.992467 0.774372 23250 1 76 0.00252177 210 0 8.74224e+07 0.0218846 1.17488e+06 8.80859e+07 6.64461e+06 23280 4.34697e+07 0 0.20344 0.992467 0.768538 8.74224e+07 0.0039518 1.93402e+07 9.21764e+06 1.95278e+07 220 1.96022e+07 1.33819e+07 0.00323451 1.95295e+07 49.9072 0.0133378 0.995623 0 50.2413 GTEX-1GZ2Q-0426-SM-9WPOU 1 B1 2 pieces; ~20% internal fat 7.9 Muscle Muscle - Skeletal 0011907 1102 1268 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988905 284472 0.981977 0.990421 0.862576 20089 1 76 0.00610634 130 0 7.85499e+07 0.0178375 1.34616e+06 7.93096e+07 1.26262e+07 20098 3.91323e+07 0 0.119402 0.990421 0.854314 7.85499e+07 0.00657788 1.73271e+07 7.49989e+06 1.74605e+07 152 1.75156e+07 1.70823e+07 0.00634175 1.73809e+07 49.807 0.0169735 0.991938 0 50.1918 GTEX-1GZ2Q-0626-SM-9MQLN 1 B1 2 pieces; thin rim of adherent adventitia 7.8 Blood Vessel Artery - Tibial 0007610 1110 1260 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807,LCSET-7320 06/02/2015 TruSeq.v1 RNASEQ 0.987503 380593 0.97537 0.989803 0.816411 21267 1 76 0.00399749 175 0 8.71064e+07 0.0242332 482229 8.80038e+07 7.69838e+06 21282 4.33292e+07 0 0.158959 0.989803 0.808085 8.71064e+07 0.00524595 1.86369e+07 7.26515e+06 1.88278e+07 193 1.88526e+07 1.66375e+07 0.00462027 1.87992e+07 49.9291 0.00547964 0.992102 0 50.2548 GTEX-1GZ2Q-0726-SM-9KNVV 1 B1 2 pieces; severe congestion and intraalveolar hemorrhage, focal pleural coverage with fibrosis and anthracotic pigmentation (arrows), a few small bronchi with sloughed mucosa (outlined) 7.4 Lung Lung 0008952 1114 1256 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991035 281178 0.980112 0.992244 0.788128 24587 1 76 0.00283428 386 0 1.2405e+08 0.0191195 605390 1.25019e+08 1.50332e+07 24632 6.17789e+07 0 0.191984 0.992244 0.782015 1.2405e+08 0.00364298 2.80838e+07 3.22127e+07 2.82053e+07 332 2.83033e+07 2.11898e+07 0.00323814 2.81319e+07 49.8481 0.00484237 0.993453 0 50.1079 GTEX-1GZ2Q-0826-SM-7P8TK 2 B1 2 pieces; small ~ 1mm in diameter well circumscribed likely adenomatous nodule (outlined), some interstitial fibrosis, variably sized follicles 7.2 Thyroid Thyroid 0002046 1118 1252 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.94448 298712 0.966943 0.969182 0.750586 25300 1 76 0.00443219 141 0 8.49041e+07 0.0327152 387271 8.76039e+07 1.41848e+07 25336 4.12354e+07 0 0.216357 0.969182 0.727455 8.49041e+07 0.00815653 1.80457e+07 1.12029e+07 1.82868e+07 155 1.93993e+07 1.46663e+07 0.0062469 1.90113e+07 49.4949 0.00442071 0.993885 0 50.3318 GTEX-1GZ2Q-0926-SM-7RHHN 1 B1 2 pieces; one piece with ~60% internal fat and fibrosis 6.7 Heart Heart - Atrial Appendage 0006631 1121 1249 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990555 192178 0.982601 0.993316 0.838582 22491 1 76 0.00229097 372 0 1.01163e+08 0.0170867 5.63502e+06 1.01844e+08 9.65023e+06 22515 5.03166e+07 0 0.144019 0.993316 0.832977 1.01163e+08 0.00414938 2.20837e+07 9.43527e+06 2.22722e+07 346 2.23611e+07 1.62177e+07 0.0032176 2.22587e+07 49.8853 0.0553299 0.996076 0 50.2125 GTEX-1GZ2Q-1226-SM-9MQM8 1 B1 2 pieces; lobulated mature adipose tissue with minimal fibrovascular component 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1133 1237 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984096 368736 0.977302 0.986503 0.778167 22717 1 76 0.00570434 133 0 7.10437e+07 0.0224079 548512 7.20156e+07 8.93207e+06 22735 3.53185e+07 0 0.199136 0.986503 0.767664 7.10437e+07 0.00737757 1.56417e+07 8.21383e+06 1.57852e+07 150 1.58191e+07 1.11928e+07 0.00653891 1.57755e+07 49.9311 0.00761657 0.98891 0 50.2283 GTEX-1GZ2Q-1826-SM-9JGHQ 1 B1 2 pieces; Sertoli cells, reduced/absent spermatogenesis, increased Leydig cells, c/w atrophy, congestion 5.7 Testis Testis 0000473 1157 1213 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 EXCLUDE 0.992157 316760 0.96185 0.993426 0.768007 29214 1 76 0.00210388 372 0 1.04857e+08 0.0379148 6.24683e+06 1.05551e+08 5.62203e+06 29261 5.22502e+07 0 0.193843 0.993426 0.762958 1.04857e+08 0.00305108 2.29574e+07 1.15584e+07 2.34535e+07 338 2.34212e+07 1.35027e+07 0.00257687 2.31152e+07 49.6713 0.0591831 0.994695 0 50.5344 GTEX-1GZ2Q-2126-SM-9KNTZ 1 B1 6 pieces; well trimmed target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 1172 1198 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992552 246826 0.970523 0.993757 0.780798 23924 1 76 0.00259208 275 0 1.01186e+08 0.0292291 2.7847e+06 1.01821e+08 1.13577e+07 23961 5.0411e+07 0 0.189724 0.993757 0.775923 1.01186e+08 0.00367404 2.20227e+07 1.0519e+07 2.22643e+07 312 2.22624e+07 1.34858e+07 0.0031324 2.21425e+07 49.8649 0.0273489 0.994961 0 50.2728 GTEX-1GZ2Q-2426-SM-9KNV8 2 B1 2 pieces; fibromuscular stroma and autolyzed glandular component ~75%, ~25% well preserved glandular component lined by urothelial epithelium (arrows), ganglion 6.4 Prostate Prostate 0002367 1180 1190 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990789 216236 0.96587 0.991949 0.748191 25334 1 76 0.0027271 214 0 9.35406e+07 0.0338835 2.04968e+06 9.42998e+07 1.11139e+07 25380 4.66081e+07 0 0.217679 0.991949 0.742168 9.35406e+07 0.00334815 2.05015e+07 1.10866e+07 2.0763e+07 242 2.07561e+07 1.4637e+07 0.00303726 2.06186e+07 49.8338 0.0217358 0.993109 0 50.3168 GTEX-1GZ2Q-2526-SM-9KNVW 1 B1 2 pieces;~60% glandular and ductal elements and ~40% surrounding fat 6.3 Salivary Gland Minor Salivary Gland 0006330 1181 1189 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990702 205837 0.971784 0.991822 0.778634 25166 1 76 0.00247493 292 0 1.29424e+08 0.0278052 2.03985e+06 1.30491e+08 1.30738e+07 25227 6.45226e+07 0 0.19315 0.991822 0.772267 1.29424e+08 0.00341736 2.91873e+07 2.99476e+07 2.93941e+07 321 2.93571e+07 1.67393e+07 0.00294561 2.9355e+07 49.9982 0.0156321 0.992942 0 50.1764 GTEX-1GZ2Q-2626-SM-7MXV9 1 B1 2 pieces; adipose tissue and ductal structures embedded in loose, cellular connective tissue, c/w gynecomastoid change 5.9 Breast Breast - Mammary Tissue 0008367 1181 1189 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975696 107788 0.96911 0.98545 0.715451 23754 1 76 0.00311139 111 0 5.92214e+07 0.0306175 156961 6.00958e+07 9.17916e+06 23783 2.92509e+07 0 0.253659 0.98545 0.705041 5.92214e+07 0.00430296 1.3016e+07 6.93454e+06 1.30424e+07 116 1.3294e+07 9.37719e+06 0.00370128 1.33184e+07 50.0458 0.00261185 0.995204 0 50.0506 GTEX-1GZ2Q-2926-SM-7PBZL 1 B1 6 pieces; target muscularis and two pieces with attached fat/vessels up to 2mm (arrows) 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 1186 1184 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761,LCSET-7211 05/15/2015 TruSeq.v1 RNASEQ 0.991747 63066 0.975745 0.992982 0.762855 21268 1 76 0.00209518 117 0 5.03151e+07 0.0239608 292685 5.06707e+07 3.31822e+06 21285 2.50563e+07 0 0.212891 0.992982 0.757501 5.03151e+07 0.00325685 1.11276e+07 5.41146e+06 1.1182e+07 120 1.11759e+07 8.37325e+06 0.00267529 1.11991e+07 50.0518 0.00577622 0.994217 0 50.1218 GTEX-1GZ2Q-3026-SM-9JGG3 1 B1 2 pieces; Purkinji cells well visualized, focal residual meninges (arrow) 7.2 Brain Brain - Cerebellum 0002037 1235 1135 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181,LCSET-7262 06/02/2015 TruSeq.v1 RNASEQ 0.989104 497644 0.936238 0.990954 0.692048 25129 1 76 0.00339326 270 0 1.1273e+08 0.0633185 2.18636e+06 1.13759e+08 1.22125e+07 25178 5.61158e+07 0 0.24419 0.990954 0.685788 1.1273e+08 0.00345359 2.39578e+07 2.81207e+07 2.44157e+07 260 2.44723e+07 1.29959e+07 0.00342337 2.40885e+07 49.6048 0.0192193 0.992805 0 50.4733 GTEX-1GZ2Q-3126-SM-9JGGM 2 B1 1 piece; predominantly adenohypophysis and tiny focus of neurohypohysis (outlined) 6.4 Pituitary Pituitary 0000007 1237 1133 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993561 485370 0.962994 0.994867 0.77374 25878 1 76 0.00204397 272 0 1.05828e+08 0.0367651 2.03973e+06 1.06374e+08 5.31914e+06 25920 5.27449e+07 0 0.189254 0.994867 0.769768 1.05828e+08 0.00297517 2.25944e+07 1.39259e+07 2.28821e+07 321 2.28883e+07 1.51242e+07 0.00250896 2.27173e+07 49.8125 0.019175 0.996172 0 50.3163 GTEX-1GZ2Q-3226-SM-9WG6L 1 B1 2 pieces 6.9 Brain Brain - Cortex 0001870 1256 1114 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992004 478330 0.965528 0.994332 0.834324 25757 1 76 0.00235608 375 0 1.40123e+08 0.0339272 5.72841e+06 1.40922e+08 1.06776e+07 25788 6.974e+07 0 0.131203 0.994332 0.829595 1.40123e+08 0.00326049 3.08379e+07 1.80991e+07 3.11128e+07 348 3.11574e+07 1.92712e+07 0.00280722 3.10885e+07 49.9447 0.0406496 0.99666 0 50.2219 GTEX-1GZ4H-0001-SM-7J3B8 B1 Blood Whole Blood 0013756 -29 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GZ4H-0001-SM-7MA6N B1 Blood Whole Blood 0013756 -29 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GZ4H-0004-SM-EYYW1 B1 9.4 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -29 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989658 621759 0.972129 0.992524 0.831853 21760 1 76 0.0025704 287 0 1.09941e+08 0.0267861 565545 1.10769e+08 4.10263e+06 21788 5.46629e+07 0 0.140276 0.992524 0.825634 1.09941e+08 0.00344797 2.4394e+07 1.2047e+07 2.46356e+07 275 2.47405e+07 2.67129e+07 0.00300792 2.45884e+07 49.8458 0.00510563 0.99539 0 50.2463 GTEX-1GZ4H-0005-SM-ARZL7 B1 9 Blood Whole Blood 0013756 -29 BP-56999 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.977215 3.43445e+06 0.864771 0.980557 0.681451 17017 1 76 0.00269516 99 0 6.24664e+07 0.134563 397175 6.3705e+07 2.72693e+06 17029 3.0822e+07 0 0.18332 0.980557 0.668202 6.24664e+07 0.00420267 1.25374e+07 1.05747e+08 1.27001e+07 113 1.30877e+07 1.19128e+07 0.00344634 1.2432e+07 48.7152 0.0062346 0.9839 0 50.3224 GTEX-1GZ4H-0126-SM-9JGGI 1 B1 2 pieces; minimal congestion; well defined lymphoid tissue 7.4 Spleen Spleen 0002106 42 1409 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.990784 112811 0.960968 0.992452 0.746891 23003 1 76 0.00481209 108 0 5.39724e+07 0.0383309 392529 5.43829e+07 6.34418e+06 23027 2.68595e+07 0 0.214077 0.992452 0.741254 5.39724e+07 0.00474304 1.16791e+07 5.96798e+06 1.18796e+07 111 1.1882e+07 7.70114e+06 0.00477762 1.17591e+07 49.7401 0.00721788 0.994119 0 50.4256 GTEX-1GZ4H-0226-SM-9JGGJ 1 B1 2 pieces: 1 with 40% oncocytic change [labeled], other with 5% and with 50% large blood vessels and stroma 7.4 Thyroid Thyroid 0002046 354 1097 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.991509 126130 0.969643 0.992988 0.812269 20743 1 76 0.00604494 106 0 5.49232e+07 0.0301428 2.27937e+06 5.5311e+07 7.32616e+06 20757 2.73611e+07 0 0.157374 0.992988 0.806573 5.49232e+07 0.0052288 1.12592e+07 1.60331e+07 1.23749e+07 123 1.23668e+07 5.48333e+06 0.00563748 1.13391e+07 47.8324 0.04121 0.994468 0 52.3602 GTEX-1GZ4H-0326-SM-7P8QX 1 B1 2 pieces; atrophic ducts and lobules 7.1 Breast Breast - Mammary Tissue 0008367 359 1092 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.990673 159465 0.969699 0.992542 0.790713 24255 1 76 0.00336372 171 0 7.69056e+07 0.0297385 378419 7.74835e+07 1.12533e+07 24290 3.82853e+07 0 0.178986 0.992542 0.784816 7.69056e+07 0.00409169 1.67253e+07 8.52027e+06 1.69974e+07 178 1.70473e+07 1.35398e+07 0.00372702 1.68049e+07 49.6419 0.00488387 0.99441 0 50.4035 GTEX-1GZ4H-0426-SM-7MXV5 1 B1 2 pieces; moderate emphysema 7.9 Lung Lung 0008952 365 1086 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.975028 106350 0.970624 0.985342 0.775669 24053 1 76 0.00346788 162 0 8.08824e+07 0.0289901 365622 8.20857e+07 1.33479e+07 24087 3.99418e+07 0 0.194955 0.985342 0.7643 8.08824e+07 0.00459718 1.76352e+07 8.72965e+06 1.77097e+07 189 1.80372e+07 1.27692e+07 0.00402662 1.80885e+07 50.0709 0.00445415 0.995655 0 50.1054 GTEX-1GZ4H-0526-SM-9KNU9 1 B1 6 pieces; well trimmed; 5-10% dermal fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 369 1082 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.99326 190770 0.970871 0.994593 0.774769 22619 1 76 0.00310548 193 0 7.94835e+07 0.0289367 596039 7.99156e+07 9.53446e+06 22644 3.96123e+07 0 0.196102 0.994593 0.77058 7.94835e+07 0.00411978 1.72389e+07 9.8465e+06 1.75344e+07 186 1.7501e+07 1.12738e+07 0.00361195 1.73682e+07 49.8095 0.00745836 0.995926 0 50.4249 GTEX-1GZ4H-0626-SM-9OSXJ 1 B1 2 pieces; well preserved; 5% internal fat 7.9 Pancreas Pancreas 0001150 372 1079 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991251 311224 0.977467 0.993764 0.826953 23078 1 76 0.00266862 152 0 1.05121e+08 0.0222016 166533 1.05781e+08 1.01078e+07 23103 5.23166e+07 0 0.150514 0.993764 0.821796 1.05121e+08 0.00391988 2.40174e+07 2.81619e+07 2.43061e+07 167 2.43343e+07 3.0371e+07 0.00329267 2.42487e+07 49.9119 0.00157432 0.996276 0 50.2988 GTEX-1GZ4H-0726-SM-9WG6X 1 B1 6 pieces; flat plaques; up to 1 mm adherent adventitia 8.1 Blood Vessel Artery - Aorta 0001496 375 1076 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992893 225849 0.97587 0.994752 0.840162 22562 1 76 0.00260684 217 0 9.41673e+07 0.0237223 279065 9.46641e+07 6.42795e+06 22585 4.68896e+07 0 0.135708 0.994752 0.835753 9.41673e+07 0.00365996 2.0171e+07 6.99633e+06 2.03893e+07 252 2.03879e+07 1.83521e+07 0.00313242 2.03375e+07 49.9381 0.00294795 0.996611 0 50.2691 GTEX-1GZ4H-0826-SM-9OSXK 1 B1 2 pieces; moderate adenomyosis; small amount of atrophic endometrium 7.2 Uterus Uterus 0000995 384 1067 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989388 291431 0.957985 0.992128 0.688923 25102 1 76 0.00289847 164 0 9.11259e+07 0.0418063 201306 9.18489e+07 9.10986e+06 25156 4.53175e+07 0 0.269062 0.992128 0.683499 9.11259e+07 0.00427744 1.96258e+07 1.00717e+07 1.9871e+07 186 1.99242e+07 1.20802e+07 0.00358605 1.98092e+07 49.8554 0.00219171 0.994867 0 50.3105 GTEX-1GZ4H-0926-SM-9WG6Y 1 B1 2 pieces; 5% fibrous content 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 386 1065 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991465 158351 0.976162 0.994034 0.823136 22409 1 76 0.00314779 206 0 8.49603e+07 0.0236141 1.11834e+06 8.54702e+07 6.45795e+06 22438 4.22882e+07 0 0.153026 0.994034 0.818226 8.49603e+07 0.00418179 1.84319e+07 8.85207e+06 1.87519e+07 240 1.87578e+07 1.1474e+07 0.00366345 1.86222e+07 49.8186 0.0130846 0.996604 0 50.4303 GTEX-1GZ4H-1026-SM-9OSXL 1 B1 6 pieces; mucosa and submucosa only, no muscularis propria 6 Stomach Stomach 0000945 390 1061 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989148 230995 0.971842 0.992138 0.794749 23106 1 76 0.0033048 254 0 8.24964e+07 0.0278682 1.58806e+06 8.31501e+07 7.86304e+06 23134 4.10123e+07 0 0.177093 0.992138 0.788501 8.24964e+07 0.00507963 1.82354e+07 4.56198e+07 1.85416e+07 214 1.85767e+07 1.34643e+07 0.00418954 1.84219e+07 49.7907 0.0190987 0.995128 0 50.4162 GTEX-1GZ4H-1226-SM-9KNUA 1 B1 6 pieces; no mucosa, only muscularis propria 7.8 Colon Colon - Transverse 0001157 404 1047 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993923 215882 0.972384 0.995017 0.801707 23571 1 76 0.00276738 226 0 9.26276e+07 0.0272688 571918 9.30915e+07 1.03256e+07 23601 4.61674e+07 0 0.170678 0.995017 0.797712 9.26276e+07 0.00367136 2.01246e+07 8.22396e+06 2.02789e+07 252 2.02809e+07 1.61681e+07 0.00321887 2.0217e+07 49.9211 0.00614361 0.996111 0 50.191 GTEX-1GZ4H-1326-SM-7P8TE 1 B1 6 pieces; 1.2 mm nubbin of mucosa on 1 piece 7.3 Colon Colon - Sigmoid 0001159 409 1042 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.941898 258442 0.971498 0.966797 0.809677 23781 1 76 0.0043319 211 0 8.93168e+07 0.0282444 646270 9.23843e+07 1.35447e+07 23812 4.33863e+07 0 0.16182 0.966797 0.782793 8.93168e+07 0.00852859 1.88338e+07 1.08739e+07 1.88064e+07 208 1.98934e+07 1.47882e+07 0.00637621 1.98724e+07 49.9737 0.00699545 0.991695 0 49.9636 GTEX-1GZ4H-1426-SM-7PC3G 1 B1 2 pieces; 20% external fat on 1 piece 6.9 Blood Vessel Artery - Tibial 0007610 588 863 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984313 435158 0.972947 0.988642 0.793681 22992 1 76 0.00386265 173 0 8.93e+07 0.0267156 366439 9.03259e+07 1.57998e+07 23025 4.42758e+07 0 0.179266 0.988642 0.784667 8.93e+07 0.00506864 1.91525e+07 8.67507e+06 1.94107e+07 194 1.95902e+07 1.55381e+07 0.00446301 1.93364e+07 49.6741 0.00405685 0.992971 0 50.3347 GTEX-1GZ4H-1526-SM-9MQLH 1 B1 2 pieces; 20% external fat 6.8 Nerve Nerve - Tibial 0001323 590 861 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985789 180225 0.97019 0.987716 0.76878 23450 1 76 0.00581041 153 0 7.17177e+07 0.0295163 264625 7.26096e+07 8.50629e+06 23481 3.57031e+07 0 0.20141 0.987716 0.759336 7.17177e+07 0.00702894 1.57287e+07 6.99665e+06 1.58415e+07 146 1.58557e+07 1.1516e+07 0.00641849 1.58441e+07 49.9818 0.00364449 0.989642 0 50.1786 GTEX-1GZ4H-1626-SM-7PC3F 1 B1 2 pieces; 20% internal & external fat on 1 piece 8 Muscle Muscle - Skeletal 0011907 596 855 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.990868 399109 0.980439 0.993152 0.869016 20589 1 76 0.00358732 281 0 1.01838e+08 0.0192981 1.40028e+06 1.0254e+08 1.41275e+07 20603 5.06593e+07 0 0.111423 0.993152 0.863065 1.01838e+08 0.00493137 2.19493e+07 1.56536e+07 2.20166e+07 275 2.21195e+07 2.03221e+07 0.0042578 2.20517e+07 49.9233 0.0136559 0.995437 0 50.0765 GTEX-1GZ4H-1726-SM-7PBZJ 1 B1 6 pieces: up to 1.3 mm subcutaneous fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 610 841 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761,LCSET-7212 05/09/2015 TruSeq.v1 RNASEQ 0.991584 295043 0.975419 0.993571 0.807355 23962 1 76 0.00274897 299 0 1.04776e+08 0.024332 576779 1.05454e+08 8.02001e+06 23997 5.21343e+07 0 0.168064 0.993571 0.802165 1.04776e+08 0.00411324 2.28276e+07 1.0944e+07 2.29759e+07 284 2.29968e+07 1.79236e+07 0.00342974 2.30061e+07 50.0101 0.00546947 0.995559 0 50.1619 GTEX-1GZ4H-1826-SM-9MQLE 1 B1 2 pieces; contains 30% blood vessels & nerves 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 594 857 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986474 221510 0.976833 0.988452 0.848332 21697 1 76 0.00573846 140 0 6.5049e+07 0.0228441 355481 6.58089e+07 7.79622e+06 21708 3.23781e+07 0 0.128501 0.988452 0.838535 6.5049e+07 0.00719338 1.40931e+07 6.60126e+06 1.42723e+07 145 1.42501e+07 1.23951e+07 0.00646446 1.42394e+07 49.9811 0.00540171 0.99043 0 50.316 GTEX-1GZ4I-0002-SM-7J3AA C1 Blood Whole Blood 0013756 609 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6780,LCSET-7254 05/20/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-1GZ4I-0002-SM-7MA6M C1 Blood Whole Blood 0013756 609 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GZ4I-0002-SM-DLIP8 C1 Blood Whole Blood 0013756 609 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1GZ4I-0006-SM-ARL6Z C1 8.4 Blood Whole Blood 0013756 609 BP-56999 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2014 LCSET-8137 02/23/2016 TruSeq.v1 EXCLUDE 0.928416 2.18142e+06 0.934297 0.929334 0.759898 17448 1 76 0.00175309 109 0 9.66235e+07 0.0645155 141402 1.03971e+08 3.27834e+06 17455 4.79422e+07 0 0.1744 0.929334 0.706199 9.66235e+07 0.00223488 2.17442e+07 1.82642e+08 2.21603e+07 143 2.24231e+07 2.83688e+07 0.00199375 2.16052e+07 49.0711 0.00136002 0.930253 0 50.4739 GTEX-1GZ4I-0011-R10a-SM-9OSX3 C1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 623 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992732 541496 0.960054 0.994488 0.845003 24228 1 76 0.00233447 270 0 1.0449e+08 0.0395609 4.10053e+06 1.05069e+08 9.44162e+06 24246 5.20398e+07 0 0.115052 0.994488 0.840345 1.0449e+08 0.00328548 2.27347e+07 2.02305e+07 2.2976e+07 324 2.29388e+07 1.20071e+07 0.00280914 2.29335e+07 49.9942 0.0390269 0.996244 0 50.2639 GTEX-1GZ4I-0011-R11b-SM-9OSWR C1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 623 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990973 450411 0.948825 0.9931 0.772487 24016 1 76 0.00266946 271 0 1.02187e+08 0.0507951 1.86763e+06 1.02897e+08 1.00133e+07 24048 5.08481e+07 0 0.176338 0.9931 0.767157 1.02187e+08 0.00340634 2.1996e+07 1.52136e+07 2.21872e+07 291 2.22764e+07 1.18801e+07 0.00303711 2.21043e+07 49.8061 0.0181505 0.995227 0 50.2163 GTEX-1GZ4I-0011-R3b-SM-9OSWP C1, A1 5.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 623 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991673 390460 0.966232 0.994008 0.843851 23376 1 76 0.00234107 372 0 1.03759e+08 0.033539 8.34557e+06 1.04384e+08 9.70934e+06 23394 5.16593e+07 0 0.122381 0.994008 0.838794 1.03759e+08 0.00350167 2.25641e+07 2.78661e+07 2.30162e+07 333 2.28143e+07 8.54314e+06 0.00292001 2.29384e+07 50.1356 0.0799505 0.996342 0 50.4959 GTEX-1GZ4I-0011-R4a-SM-9QEI9 C1, A1 5.6 Brain Brain - Amygdala 0001876 623 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989617 262569 0.96565 0.993015 0.848502 21803 1 76 0.0017928 273 0 7.98056e+07 0.0342014 9.18436e+06 8.03669e+07 4.04032e+06 21820 3.97035e+07 0 0.117148 0.993015 0.842575 7.98056e+07 0.00382847 1.73969e+07 1.89646e+07 1.78944e+07 326 1.77309e+07 5.86673e+06 0.00280715 1.77607e+07 50.042 0.11428 0.996414 0 50.7049 GTEX-1GZ4I-0011-R5a-SM-9OSWQ C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 623 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990746 649845 0.956579 0.993538 0.822174 23751 1 76 0.00235291 269 0 9.96136e+07 0.0431789 6.19937e+06 1.00262e+08 9.55908e+06 23769 4.95684e+07 0 0.134405 0.993538 0.816861 9.96136e+07 0.00362955 2.14514e+07 3.47195e+07 2.17541e+07 318 2.16984e+07 9.2686e+06 0.00298944 2.17365e+07 50.0438 0.061832 0.99633 0 50.3504 GTEX-1GZ4I-0011-R6b-SM-9WG77 C1, A1 8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 623 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992947 435691 0.96174 0.994732 0.837352 24685 1 76 0.00233861 373 0 1.09888e+08 0.0379374 5.94281e+06 1.1047e+08 7.60815e+06 24714 5.47335e+07 0 0.124388 0.994732 0.832941 1.09888e+08 0.0031946 2.40052e+07 1.70953e+07 2.42308e+07 337 2.41592e+07 1.27172e+07 0.00276584 2.42493e+07 50.093 0.0537955 0.996517 0 50.2338 GTEX-1GZ4I-0011-R7b-SM-ARU71 C1, A1 6.3 Brain Brain - Putamen (basal ganglia) 0001874 623 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.98933 1.96717e+06 0.904165 0.990905 0.768346 22078 1 76 0.00180345 268 0 8.72173e+07 0.0956102 8.19424e+06 8.80178e+07 2.91409e+06 22095 4.34534e+07 0 0.135819 0.990905 0.761358 8.72173e+07 0.00243512 1.7673e+07 7.93434e+07 1.83216e+07 314 1.8171e+07 5.62282e+06 0.00211878 1.79653e+07 49.7153 0.0930975 0.992481 0 50.901 GTEX-1GZ4I-0011-R8b-SM-9WG76 C1, A1 6 Brain Brain - Hypothalamus 0001898 623 BP-60074 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992419 282844 0.964466 0.994564 0.846298 23224 1 76 0.00234158 268 0 7.5874e+07 0.0353136 5.67019e+06 7.62886e+07 5.53522e+06 23241 3.77833e+07 0 0.118169 0.994564 0.841697 7.5874e+07 0.00333783 1.66602e+07 1.41092e+07 1.69534e+07 287 1.68804e+07 6.46841e+06 0.00283863 1.68697e+07 49.9841 0.0743255 0.996709 0 50.436 GTEX-1GZ4I-0011-R9b-SM-B2LY8 C1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 623 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8723,LCSET-9171 05/22/2016 TruSeq.v1 RNASEQ 0.987983 792491 0.957971 0.989837 0.826022 24496 1 76 0.00596226 382 0 1.04457e+08 0.0417039 5.10318e+06 1.0553e+08 1.90537e+07 24521 5.19184e+07 0 0.131948 0.989837 0.817628 1.04457e+08 0.00703181 2.29502e+07 1.51859e+07 2.3428e+07 340 2.31839e+07 1.21206e+07 0.00649604 2.33749e+07 50.2051 0.0483578 0.991691 0 50.5151 GTEX-1GZ4I-0226-SM-7RHHO 1 C1 2 pieces; 5% fibrous content 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 717 762 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.990223 172090 0.976588 0.992947 0.766206 23884 1 76 0.00248114 211 0 9.11739e+07 0.0231509 623574 9.18215e+07 8.452e+06 23919 4.53512e+07 0 0.210382 0.992947 0.760802 9.11739e+07 0.00424679 2.01768e+07 8.05791e+06 2.03028e+07 221 2.03565e+07 1.44516e+07 0.00336154 2.03642e+07 50.0094 0.00679115 0.995671 0 50.1556 GTEX-1GZ4I-0326-SM-7PBZN 0 C1 2 pieces; 40% & 20% internal and external fat content 6.6 Nerve Nerve - Tibial 0001323 722 758 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.985606 148608 0.967655 0.989781 0.731658 25159 1 76 0.00306212 218 0 9.35291e+07 0.0320725 465112 9.44947e+07 1.35734e+07 25211 4.64486e+07 0 0.235997 0.989781 0.724181 9.35291e+07 0.00467162 2.04091e+07 9.7102e+06 2.06473e+07 227 2.07579e+07 1.32602e+07 0.00386348 2.06675e+07 49.891 0.00492209 0.993956 0 50.29 GTEX-1GZ4I-0426-SM-ACKX5 1 C1 2 pieces; no plaques; well dissected 6.7 Blood Vessel Artery - Tibial 0007610 724 757 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992363 256722 0.973282 0.993873 0.783279 23074 1 76 0.002691 282 0 1.04731e+08 0.0263291 400617 1.05377e+08 1.31361e+07 23114 5.21533e+07 0 0.190003 0.993873 0.77848 1.04731e+08 0.00367959 2.2616e+07 9.95678e+06 2.27631e+07 274 2.27948e+07 1.86804e+07 0.00318454 2.27309e+07 49.9298 0.00380176 0.995382 0 50.1621 GTEX-1GZ4I-0526-SM-9YFLX 1 C1 2 pieces; <5% internal fat 8.3 Muscle Muscle - Skeletal 0011907 726 755 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.993512 426805 0.978967 0.995214 0.837396 22388 1 76 0.00262489 275 0 1.28673e+08 0.0207535 927224 1.29292e+08 1.46403e+07 22412 6.41225e+07 0 0.14157 0.995214 0.833388 1.28673e+08 0.00363574 2.78327e+07 1.31454e+07 2.79283e+07 326 2.8068e+07 2.65808e+07 0.00312945 2.79003e+07 49.8502 0.00717158 0.996916 0 50.0857 GTEX-1GZ4I-0626-SM-9WPPN 1 C1 2 pieces; well trimmed 7.3 Thyroid Thyroid 0002046 783 699 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987077 209646 0.96661 0.988901 0.738011 24181 1 76 0.00624194 122 0 7.10411e+07 0.0330983 282478 7.18384e+07 1.08656e+07 24216 3.53615e+07 0 0.228599 0.988901 0.72982 7.10411e+07 0.00700387 1.55596e+07 7.87828e+06 1.56248e+07 133 1.56739e+07 1.141e+07 0.0066222 1.56314e+07 49.9321 0.00393213 0.990726 0 50.1045 GTEX-1GZ4I-0726-SM-9QEHL 1 C1 2 pieces; patchy moderate alveolar hemorrhage; foci of dark pigment; mild emphysema 6.8 Lung Lung 0008952 785 697 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989713 217041 0.973509 0.992614 0.758552 23497 1 76 0.00200114 205 0 8.67854e+07 0.0261366 314053 8.74311e+07 4.42535e+06 23545 4.31708e+07 0 0.214957 0.992614 0.75295 8.67854e+07 0.00395686 1.91872e+07 7.33299e+06 1.93123e+07 216 1.9397e+07 1.42619e+07 0.00297614 1.93312e+07 49.915 0.003592 0.995516 0 50.1625 GTEX-1GZ4I-0826-SM-9WG6O 1 C1 2 pieces; 10% external fat on 1 piece 6.9 Heart Heart - Atrial Appendage 0006631 786 697 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992025 272698 0.979912 0.994325 0.804952 22756 1 76 0.00240843 371 0 1.1323e+08 0.0198005 2.53424e+06 1.13876e+08 8.41454e+06 22789 5.63711e+07 0 0.17496 0.994325 0.800384 1.1323e+08 0.00333397 2.43105e+07 1.40669e+07 2.44806e+07 333 2.44927e+07 1.81313e+07 0.00287013 2.45203e+07 50.0281 0.0222543 0.996626 0 50.1743 GTEX-1GZ4I-1026-SM-9KNV5 1 C1 2 pieces; mild interstitial fibrosis 6.7 Heart Heart - Left Ventricle 0006566 793 691 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993658 208773 0.980926 0.994758 0.789146 22803 1 76 0.00234491 269 0 1.15993e+08 0.0188596 3.60936e+06 1.16604e+08 1.31522e+07 22836 5.78403e+07 0 0.19178 0.994758 0.78501 1.15993e+08 0.00328993 2.57164e+07 1.36668e+07 2.59658e+07 310 2.59903e+07 1.7538e+07 0.0028169 2.58053e+07 49.8214 0.0309541 0.995858 0 50.2413 GTEX-1GZ4I-1126-SM-9QEHR 1 C1 6 pieces; mild flat plaques; well trimmed 6.3 Blood Vessel Artery - Aorta 0001496 794 691 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989314 120593 0.973532 0.992101 0.762555 21650 1 76 0.00198712 140 0 6.86419e+07 0.0260583 197966 6.91885e+07 3.57844e+06 21672 3.41293e+07 0 0.210977 0.992101 0.756531 6.86419e+07 0.00393632 1.48136e+07 5.43058e+06 1.48881e+07 151 1.49208e+07 1.18069e+07 0.00295898 1.49578e+07 50.0618 0.00286126 0.994887 0 50.1253 GTEX-1GZ4I-1226-SM-7P8TM 1 C1 6 pieces; well dissected muscularis 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 795 690 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6759 04/06/2015 TruSeq.v1 RNASEQ 0.937977 384431 0.974981 0.966191 0.762241 24508 1 76 0.00412991 168 0 9.40461e+07 0.0247432 1.10115e+06 9.73369e+07 1.44792e+07 24542 4.54939e+07 0 0.212739 0.966191 0.736471 9.40461e+07 0.0087538 1.98684e+07 1.02494e+07 1.99379e+07 186 2.12901e+07 1.51502e+07 0.00637435 2.10804e+07 49.7526 0.0113128 0.994405 0 50.0872 GTEX-1GZ4I-1526-SM-9OSW9 1 C1 2 pieces; minimal central congestion; 10% macrovesicular steatosis 6.2 Liver Liver 0001114 799 688 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991037 365233 0.977819 0.993513 0.857274 21886 1 76 0.00245497 270 0 1.05801e+08 0.0219467 2.07356e+06 1.06492e+08 1.05699e+07 21908 5.26611e+07 0 0.120545 0.993513 0.851713 1.05801e+08 0.00324151 2.251e+07 1.61791e+07 2.27883e+07 304 2.28654e+07 2.05385e+07 0.00284726 2.26686e+07 49.7839 0.0194715 0.995988 0 50.3073 GTEX-1GZ4I-2126-SM-9JGG4 1 C1 6 pieces; full thickness 6.8 Stomach Stomach 0000945 813 678 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181,LCSET-7262 06/02/2015 TruSeq.v1 EXCLUDE 0.989593 164085 0.980794 0.991283 0.833992 23162 1 76 0.00330341 326 0 1.12815e+08 0.0188326 924040 1.13807e+08 1.23656e+07 23186 5.62037e+07 0 0.146802 0.991283 0.826723 1.12815e+08 0.00321231 2.49857e+07 4.98115e+07 2.55962e+07 321 2.5615e+07 2.29445e+07 0.00325794 2.51347e+07 49.5268 0.00811936 0.992974 0 50.6034 GTEX-1GZ4I-2226-SM-9WPPO 2 C1 2 pieces 6.3 Prostate Prostate 0002367 815 677 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985238 191878 0.966101 0.98713 0.732567 25579 1 76 0.00653365 135 0 7.62289e+07 0.0336321 846821 7.72227e+07 1.22772e+07 25617 3.79322e+07 0 0.233534 0.98713 0.723138 7.62289e+07 0.00703055 1.67615e+07 8.49305e+06 1.69024e+07 149 1.69099e+07 1.05554e+07 0.00678163 1.68922e+07 49.9739 0.010966 0.989021 0 50.2092 GTEX-1GZ4I-2326-SM-9YFMO 1 C1 2 pieces; minimal fibrous content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 817 675 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.991634 356523 0.97691 0.993158 0.787695 23314 1 76 0.00251519 273 0 9.20162e+07 0.0228463 3.13129e+06 9.26501e+07 3.42388e+06 23347 4.58184e+07 0 0.189215 0.993158 0.782306 9.20162e+07 0.00375283 2.044e+07 1.1894e+07 2.06096e+07 281 2.06061e+07 1.19733e+07 0.00313306 2.05857e+07 49.9752 0.033797 0.994683 0 50.2066 GTEX-1GZ4I-2426-SM-9WPPP 2 C1 6 pieces; mucosa autolyzed, muscle intact 6.1 Colon Colon - Transverse 0001157 819 674 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987734 177874 0.969326 0.989539 0.77656 23994 1 76 0.0061432 128 0 6.44855e+07 0.0302494 928909 6.51673e+07 9.48884e+06 24022 3.20904e+07 0 0.192767 0.989539 0.768436 6.44855e+07 0.00708023 1.40427e+07 6.39627e+06 1.41369e+07 139 1.41339e+07 9.25803e+06 0.00661086 1.41579e+07 50.0425 0.0142542 0.991344 0 50.1672 GTEX-1GZ4I-2626-SM-9KNU3 1 C1 6 pieces; prominent hair follicles; 5% dermal fat; small foci of benign keratosis; well trimmed 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 824 670 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992651 250314 0.972382 0.993469 0.746496 24455 1 76 0.00264563 288 0 9.79978e+07 0.0273541 553791 9.8642e+07 9.91354e+06 24504 4.88482e+07 0 0.225886 0.993469 0.741621 9.79978e+07 0.00313406 2.14476e+07 1.23518e+07 2.15971e+07 260 2.16075e+07 1.60649e+07 0.00288964 2.15158e+07 49.8937 0.00561415 0.994286 0 50.1736 GTEX-1GZ4I-2726-SM-9JGG9 2 C1 2 pieces; reduced spermatogenesis 6 Testis Testis 0000473 826 669 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991929 942043 0.910279 0.993099 0.688027 35332 1 76 0.00205148 288 0 1.29598e+08 0.0894246 1.89832e+06 1.30498e+08 6.3003e+06 35425 6.46023e+07 0 0.222252 0.993099 0.683279 1.29598e+08 0.0028555 2.65261e+07 4.19685e+07 2.69713e+07 322 2.69588e+07 1.76042e+07 0.00245301 2.66772e+07 49.7375 0.0145467 0.994269 0 50.4161 GTEX-1GZ4I-2826-SM-9MQK5 1 C1 2 pieces; ducts and fibrosis consistent with gynecomastoid hyperplasia; 50% fat 6.7 Breast Breast - Mammary Tissue 0008367 827 669 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983389 361936 0.971024 0.985786 0.753964 23539 1 76 0.00554231 129 0 6.62389e+07 0.0286888 773522 6.7194e+07 7.87787e+06 23571 3.29413e+07 0 0.217059 0.985786 0.743247 6.62389e+07 0.00717249 1.45258e+07 9.58953e+06 1.47985e+07 145 1.48108e+07 8.81598e+06 0.00635542 1.46637e+07 49.7505 0.0115118 0.988183 0 50.465 GTEX-1GZ4I-2926-SM-9JGGO 1 C1 2 pieces 6.5 Brain Brain - Cerebellum 0002037 838 659 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992316 1.0129e+06 0.929258 0.993739 0.68623 25375 1 76 0.00214309 372 0 1.1269e+08 0.0704211 1.88531e+06 1.134e+08 5.65958e+06 25423 5.61084e+07 0 0.243028 0.993739 0.681934 1.1269e+08 0.00317559 2.38026e+07 3.60707e+07 2.4222e+07 339 2.4216e+07 1.20377e+07 0.0026586 2.39612e+07 49.7355 0.0166253 0.995162 0 50.4367 GTEX-1GZ4I-3026-SM-9KNTX 1 C1 2 pieces 6.7 Brain Brain - Cortex 0001870 840 657 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.99379 371272 0.961344 0.994948 0.82188 24583 1 76 0.00251112 270 0 9.4124e+07 0.038127 2.60875e+06 9.46019e+07 1.12025e+07 24606 4.69021e+07 0 0.139465 0.994948 0.817727 9.4124e+07 0.00335855 2.05908e+07 1.47845e+07 2.08794e+07 292 2.08958e+07 1.29401e+07 0.00293434 2.06734e+07 49.7324 0.027576 0.996106 0 50.3479 GTEX-1GZ4I-3126-SM-9WPPQ 1 C1 1 pieces; posterior lobe comprises <10% 6.1 Pituitary Pituitary 0000007 841 657 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98699 291451 0.965561 0.988788 0.729856 25744 1 76 0.0064811 134 0 7.63748e+07 0.0341765 1.18306e+06 7.72409e+07 1.22441e+07 25783 3.80124e+07 0 0.235706 0.988788 0.721672 7.63748e+07 0.0069663 1.68329e+07 9.52853e+06 1.69338e+07 149 1.69814e+07 1.00978e+07 0.00672326 1.69148e+07 49.9017 0.0153166 0.990585 0 50.1494 GTEX-1GZHY-0001-SM-7J3AC C1 Blood Whole Blood 0013756 953 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6780 02/21/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-1GZHY-0001-SM-7MA6Z C1 Blood Whole Blood 0013756 953 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-6864 03/28/2015 Standard Exome Sequencing v3 (ICE) WES GTEX-1GZHY-0005-SM-ARZL6 C1 8.5 Blood Whole Blood 0013756 953 BP-56999 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.981171 2.74893e+06 0.89317 0.983991 0.695624 19395 1 76 0.00244872 103 0 7.63086e+07 0.106171 283926 7.75501e+07 2.86165e+06 19406 3.7782e+07 0 0.197546 0.983991 0.684488 7.63086e+07 0.00365741 1.61158e+07 1.29569e+08 1.63378e+07 112 1.66074e+07 1.70751e+07 0.00305134 1.61275e+07 49.267 0.00366119 0.986812 0 50.3421 GTEX-1GZHY-0011-R11a-SM-C1YRQ C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 965 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988967 665084 0.954156 0.992024 0.784014 23252 1 76 0.00215861 371 0 1.06082e+08 0.045606 3.91170e+06 1.06935e+08 4.95295e+06 23278 5.27366e+07 0 0.170142 0.992024 0.777761 1.06082e+08 0.00290205 2.2767e+07 1.92452e+07 2.32253e+07 365 2.31476e+07 8.89546e+06 0.00252918 2.31067e+07 49.9557 0.0365803 0.995081 0 50.4982 GTEX-1GZHY-0011-R1a-SM-CE6RR C1, A1 5.7 Brain Brain - Hippocampus 0001954 965 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989797 231924 0.975905 0.991314 0.831353 22154 1 76 0.00833904 139 0 6.55225e+07 0.0239083 6.26819e+06 6.60966e+07 1.05698e+07 22169 3.26072e+07 0 0.144551 0.991314 0.824132 6.55225e+07 0.00798624 1.42032e+07 1.82509e+07 1.47912e+07 172 1.46131e+07 3.6562e+06 0.00816291 1.443e+07 49.6847 0.0948338 0.992831 0 51.014 GTEX-1GZHY-0011-R6a-SM-9OSWL C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 965 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991075 336514 0.966547 0.99373 0.829531 24213 1 76 0.00293738 267 0 1.03695e+08 0.0331703 8.63051e+06 1.04349e+08 1.01981e+07 24233 5.1606e+07 0 0.137016 0.99373 0.82433 1.03695e+08 0.00415032 2.22983e+07 3.30861e+07 2.26802e+07 329 2.25219e+07 6.75861e+06 0.00354223 2.26560e+07 50.1485 0.0827082 0.996385 0 50.4245 GTEX-1GZHY-0011-R8b-SM-9OSWK C1, A1 6 Brain Brain - Hypothalamus 0001898 965 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990641 390160 0.971767 0.993326 0.847493 23498 1 76 0.00304305 369 0 1.09687e+08 0.0280889 1.09895e+07 1.10424e+08 1.09623e+07 23514 5.45904e+07 0 0.124274 0.993326 0.841837 1.09687e+08 0.00401 2.37207e+07 3.68765e+07 2.44932e+07 338 2.43098e+07 6.64601e+06 0.00352522 2.41268e+07 49.8111 0.0995208 0.996012 0 50.8011 GTEX-1GZHY-0011-R9a-SM-9WG5R C1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 965 BP-60078 RNA isolation_PAXgene Tissue miRNA 01/29/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991032 371023 0.963855 0.993822 0.820942 24371 1 76 0.00261673 388 0 1.10688e+08 0.035726 3.78062e+06 1.11377e+08 8.37120e+06 24403 5.50719e+07 0 0.142913 0.993822 0.81587 1.10688e+08 0.00352007 2.44644e+07 1.27222e+07 2.48988e+07 340 2.48027e+07 1.53193e+07 0.00306714 2.48488e+07 50.0464 0.0339445 0.996611 0 50.44 GTEX-1GZHY-0126-SM-9WYUQ 0 C1 2 pieces, 10 -15% interstitial fat, rep delineated 8.7 Muscle Muscle - Skeletal 0011907 1133 805 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994827 310805 0.983769 0.995897 0.867585 19693 1 76 0.00227179 268 0 9.44617e+07 0.0160106 1.3119e+06 9.48509e+07 6.31022e+06 19706 4.71001e+07 0 0.116184 0.995897 0.864025 9.44617e+07 0.00393695 2.07197e+07 8.84774e+06 2.07903e+07 259 2.08615e+07 1.99228e+07 0.00310348 2.07344e+07 49.8472 0.0138312 0.996967 0 50.0851 GTEX-1GZHY-0226-SM-9WG6A 0 C1 2 pieces, nubbins of adherent fat up to ~1mm, rep delineated 6.5 Nerve Nerve - Tibial 0001323 1134 805 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990041 287483 0.966164 0.992833 0.732449 25933 1 76 0.00270986 283 0 1.13779e+08 0.0335239 571626 1.146e+08 8.80124e+06 25993 5.65932e+07 0 0.233715 0.992833 0.7272 1.13779e+08 0.00381679 2.48978e+07 1.08786e+07 2.51919e+07 312 2.52585e+07 1.6611e+07 0.00326177 2.51295e+07 49.872 0.004988 0.995625 0 50.2936 GTEX-1GZHY-0326-SM-9QEHI 0 C1 6 pieces, dermal fat up to ~1mm, rep delineated; squamous epithelium is ~ 40 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1135 804 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.988892 304935 0.972468 0.992163 0.795149 23706 1 76 0.00193972 238 0 8.58419e+07 0.0272403 530528 8.65199e+07 4.51154e+06 23740 4.26996e+07 0 0.177319 0.992163 0.788918 8.58419e+07 0.0039637 1.85957e+07 1.05525e+07 1.87111e+07 230 1.88149e+07 1.47257e+07 0.00294837 1.87464e+07 49.9088 0.00613186 0.995434 0 50.1546 GTEX-1GZHY-0526-SM-9MQLM 0 C1 2 pieces, no significant atherosis or adherent fat 5.6 Blood Vessel Artery - Tibial 0007610 1137 803 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98549 335509 0.973325 0.987869 0.81254 21922 1 76 0.00557787 146 0 7.27662e+07 0.0263874 468131 7.36597e+07 8.91598e+06 21946 3.61868e+07 0 0.160786 0.987869 0.802683 7.27662e+07 0.00733551 1.55598e+07 5.94193e+06 1.57766e+07 158 1.57536e+07 1.2062e+07 0.00645457 1.5749e+07 49.9926 0.00635532 0.990248 0 50.346 GTEX-1GZHY-0626-SM-9KNVC 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~35-45 microns 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1147 793 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992831 295632 0.972851 0.993897 0.768793 25000 1 76 0.0026557 298 0 1.16418e+08 0.0268094 462438 1.17133e+08 1.30378e+07 25049 5.80296e+07 0 0.204058 0.993897 0.764101 1.16418e+08 0.00346196 2.57109e+07 1.36534e+07 2.58309e+07 291 2.58512e+07 2.02892e+07 0.0030584 2.58122e+07 49.9622 0.00394799 0.994964 0 50.1164 GTEX-1GZHY-0726-SM-9WG6B 1 C1 2 pieces mainly fibroadipose elements, few foci of atrophic TDLUs, rep delinated, 6.1 Breast Breast - Mammary Tissue 0008367 1160 781 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991405 272627 0.974163 0.993526 0.764724 25735 1 76 0.00274695 280 0 1.08531e+08 0.0254312 842832 1.09238e+08 8.03427e+06 25783 5.40163e+07 0 0.209439 0.993526 0.759774 1.08531e+08 0.00360004 2.39293e+07 1.10651e+07 2.41556e+07 305 2.41902e+07 1.64643e+07 0.00317258 2.41118e+07 49.9189 0.00771557 0.995648 0 50.2353 GTEX-1GZHY-0826-SM-9OSXT 1 C1 2 pieces, moderate-severe congestion 6.3 Lung Lung 0008952 1170 771 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.987119 258483 0.968512 0.990596 0.744758 24915 1 76 0.00286449 271 0 9.77015e+07 0.0311894 896107 9.8629e+07 9.53891e+06 24952 4.85241e+07 0 0.223755 0.990596 0.737754 9.77015e+07 0.00438805 2.14051e+07 1.10072e+07 2.16133e+07 260 2.16942e+07 1.27486e+07 0.0036236 2.16522e+07 49.9516 0.00908564 0.994072 0 50.242 GTEX-1GZHY-1226-SM-9QEIY 1 C1 2 pieces, no abnormalities 6 Heart Heart - Atrial Appendage 0006631 1177 767 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 EXCLUDE 0.990378 178045 0.984651 0.993462 0.85251 20171 1 76 0.00230816 366 0 9.67718e+07 0.0152852 6.29757e+06 9.74087e+07 4.74622e+06 20180 4.81693e+07 0 0.132142 0.993462 0.846936 9.67718e+07 0.0045775 2.10826e+07 3.53414e+07 2.14487e+07 361 2.12823e+07 4.68654e+06 0.00343931 2.14454e+07 50.1909 0.064651 0.996545 0 50.4303 GTEX-1GZHY-1426-SM-9WG5H 1 C1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 1182 763 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.986575 390754 0.9623 0.989343 0.695159 26756 1 76 0.0027417 276 0 1.2265e+08 0.0374052 561807 1.23971e+08 8.66102e+06 26827 6.09883e+07 0 0.267142 0.989343 0.687751 1.2265e+08 0.00400859 2.66288e+07 1.4995e+07 2.68991e+07 325 2.70043e+07 1.64193e+07 0.00337337 2.68488e+07 49.8557 0.00453174 0.992112 0 50.2525 GTEX-1GZHY-1626-SM-9WG79 1 C1 6 pieces, atherosis up to ~0.3mm 7.3 Blood Vessel Artery - Aorta 0001496 1189 757 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.988455 154266 0.974284 0.991688 0.724608 23074 1 76 0.00275695 142 0 7.63514e+07 0.0253351 192558 7.69913e+07 5.65842e+06 23111 3.7936e+07 0 0.249676 0.991688 0.718585 7.63514e+07 0.00408964 1.65788e+07 6.75659e+06 1.6748e+07 158 1.6822e+07 1.1764e+07 0.00342112 1.67421e+07 49.881 0.00250103 0.99492 0 50.2538 GTEX-1GZHY-1926-SM-9WYUL 1 C1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1193 754 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993179 164549 0.973643 0.994633 0.816112 22925 1 76 0.00283091 369 0 9.3035e+07 0.0262059 3.96636e+06 9.3537e+07 6.75024e+06 22945 4.63452e+07 0 0.157531 0.994633 0.811732 9.3035e+07 0.00477725 2.04195e+07 1.19115e+07 2.07846e+07 336 2.07404e+07 8.49429e+06 0.00380266 2.05814e+07 49.8076 0.0424042 0.996088 0 50.4431 GTEX-1GZHY-2426-SM-9JGGK 1 C1 2 pieces, post menopausal atrophy, no abnormalities 5.7 Ovary Ovary 0000992 1211 739 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.98898 171135 0.962338 0.991063 0.704641 23484 1 76 0.00388181 114 0 4.65437e+07 0.0374701 243176 4.69634e+07 5.40326e+06 23515 2.31552e+07 0 0.257697 0.991063 0.698344 4.65437e+07 0.00413858 1.0168e+07 6.79026e+06 1.01946e+07 113 1.01971e+07 6.49784e+06 0.00400992 1.02612e+07 50.1567 0.00517799 0.993146 0 50.0652 GTEX-1GZHY-2526-SM-9OSW6 1 C1 2 pieces, mainly myometrium, foci of of autolyzed adenomyosis, rep delineated 5.7 Uterus Uterus 0000995 1213 737 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.988849 224053 0.96261 0.992072 0.769086 24384 1 76 0.00267615 206 0 8.89082e+07 0.0371587 471198 8.96187e+07 9.0784e+06 24422 4.41872e+07 0 0.193524 0.992072 0.762988 8.89082e+07 0.00410984 1.92153e+07 8.92583e+06 1.94512e+07 229 1.94867e+07 1.25088e+07 0.00339067 1.94599e+07 49.9656 0.00525781 0.995295 0 50.305 GTEX-1GZHY-3026-SM-7MXVA 1 C1 4 pieces, no abnormalities 6.7 Brain Brain - Cerebellum 0002037 1262 691 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.974563 166271 0.953834 0.985028 0.764073 23186 1 76 0.00333605 197 0 7.68162e+07 0.0458559 1.73124e+06 7.79838e+07 1.26824e+07 23212 3.79222e+07 0 0.189762 0.985028 0.752633 7.68162e+07 0.00444359 1.64698e+07 1.36082e+07 1.65607e+07 214 1.68448e+07 8.18618e+06 0.00388394 1.6906e+07 50.0907 0.0222 0.995492 0 50.1375 GTEX-1GZHY-3126-SM-9QEHH 1 C1 4 pieces, no abnormalities 5.6 Brain Brain - Cortex 0001870 1264 689 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990421 715902 0.952966 0.993691 0.824822 22617 1 76 0.0021561 265 0 9.35288e+07 0.0467576 7.88621e+06 9.41226e+07 4.45533e+06 22635 4.65384e+07 0 0.128144 0.993691 0.819619 9.35288e+07 0.00424428 1.9887e+07 4.29747e+07 2.04261e+07 319 2.03145e+07 7.50469e+06 0.00319676 2.02469e+07 49.9167 0.0837866 0.996961 0 50.6686 GTEX-1GZHY-3226-SM-9KNUB 2 C1 1 piece, ~40% neurohypophysis (delineated); rest moderatey autolyzed adenohypophysis 6.9 Pituitary Pituitary 0000007 1264 689 BP-59341 RNA Extraction from Paxgene-derived Lysate Plate Based 01/06/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992812 237987 0.965276 0.993973 0.705261 26246 1 76 0.00290526 161 0 7.98236e+07 0.0344224 888010 8.03076e+07 1.00457e+07 26297 3.97698e+07 0 0.260015 0.993973 0.70101 7.98236e+07 0.0034791 1.75089e+07 9.15754e+06 1.76338e+07 175 1.76619e+07 1.02905e+07 0.00319185 1.75691e+07 49.8683 0.0110576 0.995133 0 50.1777 GTEX-1H11D-0001-SM-EYYVW B1 8.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -93 BP-57013 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989225 454310 0.969248 0.992075 0.806562 20933 1 76 0.00212559 134 0 6.89661e+07 0.0303876 277995 6.9517e+07 2.58076e+06 20957 3.42975e+07 0 0.162686 0.992075 0.80017 6.89661e+07 0.00301089 1.52452e+07 7.47124e+06 1.53804e+07 141 1.54326e+07 1.5877e+07 0.00256697 1.53839e+07 49.921 0.00399895 0.994924 0 50.2206 GTEX-1H11D-0003-SM-AG5YR B1 Blood Whole Blood 0013756 -93 BP-56998 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H11D-0005-SM-ACKV7 B1 9.3 Blood Whole Blood 0013756 -93 BP-56999 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.988417 2.2254e+06 0.922094 0.990242 0.758754 19410 1 76 0.00300364 129 0 8.79491e+07 0.077122 554433 8.88157e+07 1.12515e+07 19421 4.37677e+07 0 0.16334 0.990242 0.75135 8.79491e+07 0.00432648 1.87603e+07 9.45196e+07 1.88749e+07 160 1.89397e+07 1.75135e+07 0.00366384 1.89034e+07 49.9519 0.00624251 0.992067 0 50.1523 GTEX-1H11D-0226-SM-9WG6Z 1 B1 6 pieces; relatively well trimmed, includes ~5% internal/external fat, epidermis measures 37 microns 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 304 622 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990736 167546 0.969509 0.993092 0.768414 23366 1 76 0.00255542 168 0 6.85968e+07 0.0302837 549608 6.9074e+07 5.53826e+06 23395 3.41367e+07 0 0.201095 0.993092 0.763106 6.85968e+07 0.00353171 1.48996e+07 7.09826e+06 1.50728e+07 163 1.50645e+07 1.00505e+07 0.0030424 1.50628e+07 49.9972 0.0079568 0.995448 0 50.289 GTEX-1H11D-0326-SM-9WG71 0 B1 2 pieces; includes from 5-10% internal fat 8.7 Muscle Muscle - Skeletal 0011907 308 618 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992944 299589 0.983784 0.995128 0.867569 21642 1 76 0.0020088 379 0 1.36689e+08 0.0159728 1.87416e+06 1.37358e+08 9.51818e+06 21657 6.80864e+07 0 0.116215 0.995128 0.863343 1.36689e+08 0.00307887 2.90955e+07 1.48387e+07 2.92614e+07 335 2.93033e+07 2.7259e+07 0.00254266 2.93102e+07 50.0059 0.0136443 0.997313 0 50.1422 GTEX-1H11D-0426-SM-ADEIO 1 B1 2 pieces; nerve with 50-60% internal and attached fat 6.2 Nerve Nerve - Tibial 0001323 311 615 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981486 378759 0.966759 0.988007 0.714989 24793 1 76 0.0034937 174 0 9.1317e+07 0.0329676 464104 9.24254e+07 9.95094e+06 24837 4.52258e+07 0 0.25177 0.988007 0.706414 9.1317e+07 0.00352265 1.99314e+07 9.38677e+06 2.01806e+07 198 2.04312e+07 1.31319e+07 0.00350808 2.02184e+07 49.7382 0.00502139 0.994528 0 50.3106 GTEX-1H11D-0526-SM-ACKX6 1 B1 2 pieces; well trimmed, mild atherosclerosis 8.1 Blood Vessel Artery - Tibial 0007610 313 613 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991091 367471 0.974963 0.992768 0.79577 23324 1 76 0.00286589 277 0 1.18174e+08 0.0245998 432530 1.19035e+08 1.63839e+07 23357 5.88152e+07 0 0.179193 0.992768 0.790015 1.18174e+08 0.0034612 2.56758e+07 9.07102e+06 2.58672e+07 294 2.59421e+07 2.18037e+07 0.00316304 2.57907e+07 49.8537 0.00363363 0.994446 0 50.1857 GTEX-1H11D-0626-SM-9WPQ1 1 B1 2 pieces; one piece includes ~10% fat/vessels, some regressive changes 7.2 Thyroid Thyroid 0002046 320 606 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986791 219039 0.963704 0.988573 0.719863 24800 1 76 0.00644575 118 0 7.28421e+07 0.0359582 254556 7.3684e+07 1.19896e+07 24843 3.62582e+07 0 0.243842 0.988573 0.711637 7.28421e+07 0.00690681 1.58899e+07 7.187e+06 1.5935e+07 130 1.5981e+07 1.13568e+07 0.00667587 1.59641e+07 49.9736 0.0034547 0.990355 0 50.071 GTEX-1H11D-0726-SM-9OSWA 1 B1 2 pieces; patchy collapse, thickening of alveolar walls, numerous macrophages 7.4 Lung Lung 0008952 321 605 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989446 240378 0.969412 0.992363 0.7572 25112 1 76 0.00269837 132 0 7.24672e+07 0.030139 295173 7.30249e+07 7.17711e+06 25149 3.60371e+07 0 0.212213 0.992363 0.751417 7.24672e+07 0.0038128 1.59784e+07 7.68924e+06 1.61295e+07 154 1.61977e+07 1.20156e+07 0.00325395 1.61133e+07 49.8695 0.00404209 0.995279 0 50.2353 GTEX-1H11D-0826-SM-9OSWB 1 B1 2 pieces; some congestion 7.8 Liver Liver 0001114 325 601 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992512 287933 0.97641 0.994769 0.850705 21717 1 76 0.00234189 269 0 9.48683e+07 0.0232439 742464 9.53671e+07 9.36914e+06 21739 4.7237e+07 0 0.125705 0.994769 0.846255 9.48683e+07 0.00325263 2.0251e+07 1.54461e+07 2.03949e+07 262 2.04431e+07 2.02339e+07 0.00279622 2.03917e+07 49.937 0.00778532 0.997027 0 50.177 GTEX-1H11D-0926-SM-9OSXO 1 B1 2 pieces; both include up to 20% attached fat, focal squamous metaplasia of duct 8.1 Pancreas Pancreas 0001150 326 600 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.993473 384060 0.977421 0.995215 0.826614 25365 1 76 0.00225203 276 0 1.69051e+08 0.0222815 650998 1.69864e+08 1.38802e+07 25401 8.42301e+07 0 0.150806 0.995215 0.822658 1.69051e+08 0.00342431 3.82342e+07 3.96095e+07 3.83095e+07 299 3.85104e+07 4.68223e+07 0.00283714 3.83201e+07 49.8761 0.00383248 0.996956 0 50.0492 GTEX-1H11D-1026-SM-9QEIU 0 B1 2 pieces; scattered fat, interstitial fibrosis 7.5 Heart Heart - Atrial Appendage 0006631 328 598 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991297 176365 0.979199 0.994289 0.826327 21954 1 76 0.00146562 264 0 8.72978e+07 0.0206157 2.1781e+06 8.77992e+07 4.43339e+06 21969 4.34563e+07 0 0.152872 0.994289 0.821608 8.72978e+07 0.00352167 1.88911e+07 1.65867e+07 1.90811e+07 305 1.90644e+07 1.02338e+07 0.00249055 1.91157e+07 50.0672 0.0248077 0.99728 0 50.2503 GTEX-1H11D-1126-SM-9YFM5 1 B1 2 pieces; mature adipose tissue 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 328 598 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992976 292129 0.979704 0.994624 0.80608 23209 1 76 0.00225086 370 0 1.09675e+08 0.0201172 2.25126e+06 1.10268e+08 3.90444e+06 23240 5.46535e+07 0 0.173624 0.994624 0.801746 1.09675e+08 0.00330926 2.40927e+07 2.09833e+07 2.44644e+07 364 2.44327e+07 1.23505e+07 0.00277918 2.4274e+07 49.8371 0.0204163 0.996272 0 50.3827 GTEX-1H11D-1226-SM-9WPQ2 0 B1 2 pieces; interstitial fibrosis and myocyte hypertrophy 9.1 Heart Heart - Left Ventricle 0006566 332 594 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989523 218404 0.983791 0.990981 0.867163 21000 1 76 0.00598239 149 0 7.64923e+07 0.0159496 820230 7.71885e+07 1.20523e+07 21009 3.81126e+07 0 0.116628 0.990981 0.859342 7.64923e+07 0.00640244 1.69825e+07 8.53565e+06 1.70812e+07 166 1.70925e+07 1.48579e+07 0.00619211 1.7071e+07 49.9684 0.0106263 0.992438 0 50.1448 GTEX-1H11D-1426-SM-9MQKY 1 B1 2 pieces; both include partial rim of fat/nerve (up to 1.5mm, ~50%), plaque 6.7 Blood Vessel Artery - Coronary 0001621 347 579 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.985528 251444 0.973005 0.987471 0.817851 22590 1 76 0.00564916 164 0 8.1873e+07 0.0266265 370293 8.29118e+07 1.01069e+07 22610 4.07551e+07 0 0.155155 0.987471 0.807604 8.1873e+07 0.00675454 1.7617e+07 6.425e+06 1.77843e+07 171 1.77977e+07 1.52165e+07 0.00620076 1.7754e+07 49.9385 0.0044661 0.989413 0 50.2364 GTEX-1H11D-1526-SM-9MQJY 0 B1 2 pieces; fat admixed with fibrocollagenous tissue, no ductal elements 6.8 Breast Breast - Mammary Tissue 0008367 350 576 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986554 165044 0.976352 0.988453 0.806624 22865 1 76 0.00550263 138 0 7.25885e+07 0.0233898 419107 7.34365e+07 8.62451e+06 22885 3.6148e+07 0 0.169727 0.988453 0.79731 7.25885e+07 0.00672763 1.59005e+07 7.09346e+06 1.612e+07 154 1.61234e+07 1.21881e+07 0.00611395 1.60256e+07 49.8479 0.00570707 0.990351 0 50.3427 GTEX-1H11D-1626-SM-9JGHM 1 B1 2 pieces; active spermatogenesis 6.5 Testis Testis 0000473 354 572 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991868 470005 0.925012 0.993148 0.713094 35211 1 76 0.00195107 295 0 1.40589e+08 0.0745788 1.25753e+06 1.41559e+08 6.65079e+06 35298 7.00689e+07 0 0.211919 0.993148 0.708208 1.40589e+08 0.00298402 2.89333e+07 1.88906e+07 2.90783e+07 319 2.91695e+07 2.40677e+07 0.00246688 2.89929e+07 49.8482 0.00888341 0.994428 0 50.125 GTEX-1H11D-1826-SM-9QEHM 0 B1 6 pieces; well trimmed, minimal internal fat 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 361 565 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989669 299063 0.971619 0.992969 0.800198 23471 1 76 0.00167649 221 0 8.46869e+07 0.0281965 552398 8.52866e+07 4.30848e+06 23502 4.21311e+07 0 0.171422 0.992969 0.794571 8.46869e+07 0.00399354 1.85023e+07 1.03719e+07 1.86878e+07 230 1.8761e+07 1.40793e+07 0.00283117 1.86855e+07 49.8992 0.00647696 0.996268 0 50.2494 GTEX-1H11D-1926-SM-9QEHN 0 B1 6 pieces; target muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 367 559 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990496 289163 0.973418 0.993318 0.825584 23048 1 76 0.00172019 273 0 9.15094e+07 0.0262843 529113 9.2125e+07 4.67474e+06 23070 4.55354e+07 0 0.147834 0.993318 0.820067 9.15094e+07 0.00369157 1.95224e+07 6.96398e+06 1.96963e+07 269 1.97502e+07 1.69654e+07 0.00270308 1.97e+07 49.9363 0.00574343 0.996139 0 50.2217 GTEX-1H11D-2026-SM-A9G3C 0 B1 6 pieces; target muscularis 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 369 557 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986688 174104 0.972033 0.991578 0.804167 22838 1 76 0.00361178 137 0 7.65248e+07 0.0277072 368869 7.71747e+07 6.96832e+06 22856 3.7993e+07 0 0.167866 0.991578 0.797395 7.65248e+07 0.00410255 1.62414e+07 6.38671e+06 1.6534e+07 159 1.66201e+07 1.36436e+07 0.00385275 1.64843e+07 49.7948 0.00477966 0.996469 0 50.4465 GTEX-1H11D-2126-SM-9OSXM 0 B1 6 pieces 9 Esophagus Esophagus - Mucosa 0006920 373 553 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990987 287981 0.969757 0.993095 0.764895 23429 1 76 0.00261875 162 0 8.60029e+07 0.0300006 324564 8.66009e+07 8.77175e+06 23460 4.28174e+07 0 0.204862 0.993095 0.759614 8.60029e+07 0.0034651 1.91685e+07 1.3636e+07 1.93367e+07 192 1.93936e+07 1.53463e+07 0.00304103 1.92912e+07 49.8676 0.00374781 0.995204 0 50.2185 GTEX-1H11D-2226-SM-9OSXN 2 B1 6 pieces; mostly full thickness sections, mucosa is moderately to severely autolyzed 6.5 Stomach Stomach 0000945 377 549 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.98999 152768 0.974864 0.992907 0.808066 23830 1 76 0.00240177 198 0 7.10798e+07 0.024715 730765 7.15876e+07 7.18094e+06 23849 3.53456e+07 0 0.166798 0.992907 0.802335 7.10798e+07 0.00374415 1.58455e+07 2.5788e+07 1.60369e+07 178 1.60878e+07 1.28038e+07 0.00307099 1.5992e+07 49.8507 0.010208 0.995825 0 50.3002 GTEX-1H11D-2326-SM-A8N9O 1 B1 6 pieces; predominantly target muscularis, few strips of residual mucosa 6.2 Colon Colon - Sigmoid 0001159 382 544 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984352 209839 0.966846 0.987179 0.778601 24899 1 76 0.0104518 136 0 7.2943e+07 0.032438 660315 7.38904e+07 1.23141e+07 24927 3.62185e+07 0 0.188246 0.987179 0.768618 7.2943e+07 0.0115092 1.58896e+07 8.88819e+06 1.60846e+07 146 1.61129e+07 1.05443e+07 0.010979 1.60666e+07 49.9281 0.00893641 0.990006 0 50.305 GTEX-1H11D-2426-SM-9JGGN 0 B1 2 pieces; small attachment of fat (~5%) 8.1 Adrenal Gland Adrenal Gland 0002369 384 542 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994415 344698 0.976201 0.995678 0.820364 23367 1 76 0.00180837 270 0 1.06428e+08 0.0234988 1.57142e+06 1.0689e+08 5.43753e+06 23395 5.3056e+07 0 0.155836 0.995678 0.816819 1.06428e+08 0.00265495 2.35864e+07 1.07541e+07 2.38687e+07 326 2.3888e+07 1.77856e+07 0.00223112 2.36905e+07 49.7924 0.0147013 0.996941 0 50.2975 GTEX-1H11D-2526-SM-9JGGU 1 B1 6 pieces; several include significant lymphoid tissue, few strips of residual musculairs 8 Small Intestine Small Intestine - Terminal Ileum 0001211 391 535 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992278 686405 0.96004 0.993602 0.705906 26927 1 76 0.00238387 376 0 1.29119e+08 0.0391401 486594 1.29951e+08 6.79117e+06 27006 6.4268e+07 0 0.254135 0.993602 0.701389 1.29119e+08 0.0032688 2.83162e+07 1.50646e+07 2.84519e+07 347 2.85223e+07 2.02777e+07 0.00282575 2.84139e+07 49.9048 0.00374445 0.994925 0 50.1195 GTEX-1H11D-2626-SM-9JGH4 1 B1 6 pieces; full thickness sections 7.2 Colon Colon - Transverse 0001157 393 533 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992431 593560 0.974276 0.993814 0.8209 24376 1 76 0.00226195 381 0 1.22531e+08 0.0238778 2.24303e+06 1.23294e+08 5.82576e+06 24417 6.09409e+07 0 0.153377 0.993814 0.815822 1.22531e+08 0.00329069 2.73704e+07 1.39775e+07 2.76784e+07 382 2.76854e+07 1.91586e+07 0.0027756 2.75123e+07 49.8432 0.0181925 0.995198 0 50.2797 GTEX-1H11D-5004-SM-AN46X B1 Muscle Muscle - Skeletal 0011907 310 ChIP-Seq GTEX-1H11D-5010-SM-AN46Y B1 Heart Heart - Left Ventricle 0006566 335 ChIP-Seq GTEX-1H1CY-0002-SM-DHP2D B1 Blood Whole Blood 0013756 1240 BP-57038 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/06/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1CY-0005-SM-A9G15 B1 8.6 Blood Whole Blood 0013756 1240 BP-57039 RNA isolation_PAXgene Blood RNA (Manual) 10/06/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.956025 471424 0.980906 0.961832 0.788432 18028 1 76 0.00321963 92 0 8.2744e+07 0.0182067 282824 8.60275e+07 6.21510e+06 18032 4.10364e+07 0 0.192474 0.961832 0.758339 8.2744e+07 0.00469314 1.95298e+07 1.44527e+08 1.96699e+07 112 1.98371e+07 2.28308e+07 0.00394227 1.98849e+07 50.0602 0.0032876 0.96764 0 50.1786 GTEX-1H1CY-0011-R10a-SM-CE6SD B1, A1 6.7 Brain Brain - Frontal Cortex (BA9) 0009834 1238 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987758 578842 0.965015 0.989866 0.837059 22898 1 76 0.00888612 138 0 7.13566e+07 0.0347454 4.82769e+06 7.20871e+07 1.12423e+07 22918 3.54582e+07 0 0.127956 0.989866 0.828576 7.13566e+07 0.00926066 1.54061e+07 1.49553e+07 1.56046e+07 164 1.56364e+07 6.58692e+06 0.00907299 1.54962e+07 49.7748 0.0669702 0.991975 0 50.32 GTEX-1H1CY-0011-R11a-SM-C1YQR B1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 1238 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989532 898606 0.951367 0.992099 0.757134 23997 1 76 0.00238955 272 0 1.07879e+08 0.048163 1.39904e+06 1.08738e+08 5.06275e+06 24033 5.36334e+07 0 0.194233 0.992099 0.751152 1.07879e+08 0.0029141 2.32209e+07 1.43946e+07 2.33766e+07 304 2.35137e+07 1.44919e+07 0.00265115 2.33252e+07 49.7988 0.0128661 0.994667 0 50.1671 GTEX-1H1CY-0011-R1a-SM-CKZOZ B1, A1 6.5 Brain Brain - Hippocampus 0001954 1238 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.988371 1.17416e+06 0.946275 0.990753 0.814852 23340 1 76 0.0032236 272 0 8.8807e+07 0.0534494 7.68297e+06 8.96359e+07 7.89168e+06 23365 4.4194e+07 0 0.131423 0.990753 0.807317 8.8807e+07 0.00453314 1.87502e+07 3.5336e+07 1.93615e+07 266 1.92877e+07 8.92178e+06 0.00387679 1.90107e+07 49.6384 0.0857131 0.993135 0 50.802 GTEX-1H1CY-0011-R4b-SM-CJI3G B1, A1 6.7 Brain Brain - Amygdala 0001876 1238 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992248 681276 0.965078 0.993853 0.84489 20360 1 76 0.00414441 180 0 7.32562e+07 0.0347393 9.58817e+06 7.37093e+07 4.65986e+06 20370 3.64654e+07 0 0.120189 0.993853 0.839696 7.32562e+07 0.00474449 1.5207e+07 2.97404e+07 1.6172e+07 207 1.6045e+07 5.00366e+06 0.00444396 1.54145e+07 48.998 0.130081 0.995458 0 51.5376 GTEX-1H1CY-0011-R5a-SM-CM2SN B1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 1238 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993317 594897 0.964411 0.994953 0.857572 22781 1 76 0.00320737 370 0 9.18136e+07 0.0352252 7.09129e+06 9.22793e+07 5.70593e+06 22800 4.57243e+07 0 0.106839 0.994953 0.853244 9.18136e+07 0.00427881 1.98454e+07 2.13015e+07 2.0137e+07 337 2.00858e+07 9.30771e+06 0.00374221 2.00255e+07 49.9248 0.0768459 0.996589 0 50.3646 GTEX-1H1CY-0011-R6b-SM-CE6RP B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1238 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.991315 418692 0.96102 0.993085 0.820636 24232 1 76 0.00595267 199 0 8.63539e+07 0.0386592 4.97973e+06 8.69552e+07 1.40183e+07 24254 4.2987e+07 0 0.140384 0.993085 0.814961 8.63539e+07 0.00642596 1.86303e+07 1.61736e+07 1.87729e+07 232 1.88254e+07 9.39953e+06 0.00618889 1.87058e+07 49.8406 0.0572677 0.994854 0 50.1906 GTEX-1H1CY-0011-R7a-SM-CJI32 B1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 1238 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991228 814288 0.961516 0.992979 0.823258 21644 1 76 0.00336474 141 0 6.44045e+07 0.0382272 4.89982e+06 6.48599e+07 3.99680e+06 21666 3.20267e+07 0 0.138258 0.992979 0.817477 6.44045e+07 0.00411132 1.36888e+07 2.19275e+07 1.40592e+07 168 1.40937e+07 6.20724e+06 0.00373737 1.37452e+07 49.374 0.0755446 0.99473 0 50.6674 GTEX-1H1CY-0011-R8b-SM-CJI31 B1, A1 6.4 Brain Brain - Hypothalamus 0001898 1238 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991048 884943 0.963512 0.992457 0.817785 23815 1 76 0.00322549 205 0 8.33717e+07 0.0362085 5.07605e+06 8.40054e+07 5.49194e+06 23844 4.14709e+07 0 0.145727 0.992457 0.811616 8.33717e+07 0.00375477 1.7892e+07 2.11544e+07 1.84679e+07 229 1.84482e+07 9.27637e+06 0.00348975 1.80028e+07 49.3891 0.0604253 0.993865 0 50.7919 GTEX-1H1CY-0126-SM-9YFLY 1 B1 6 pieces; well trimmed; 10% dermall fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1253 1259 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992412 304144 0.977057 0.994011 0.809599 25406 1 76 0.00282233 280 0 1.09115e+08 0.0226309 474615 1.09772e+08 4.01832e+06 25443 5.43378e+07 0 0.167458 0.994011 0.80475 1.09115e+08 0.00391097 2.41177e+07 1.15964e+07 2.4277e+07 300 2.43043e+07 2.04501e+07 0.00336578 2.42646e+07 49.9591 0.00432363 0.99561 0 50.1646 GTEX-1H1CY-0326-SM-9QEIZ 1 B1 1 pieces: 1 with extensive (30%) scar content, other with <5% scar; consistent with old infarction 5.9 Heart Heart - Left Ventricle 0006566 1274 1238 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990122 124295 0.981833 0.993459 0.857262 19300 1 76 0.00402403 140 0 6.37494e+07 0.0180768 6.36877e+06 6.41692e+07 3.21727e+06 19306 3.17162e+07 0 0.124571 0.993459 0.851654 6.37494e+07 0.00636735 1.38347e+07 1.48678e+07 1.39974e+07 173 1.39972e+07 3.7505e+06 0.00519176 1.39911e+07 49.9892 0.0992496 0.996795 0 50.2923 GTEX-1H1CY-0426-SM-9KNVD 1 B1 2 pieces; 10% fibrous content 5.8 Heart Heart - Atrial Appendage 0006631 1275 1237 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.991919 165033 0.982422 0.993442 0.821513 22529 1 76 0.00448998 265 0 1.14256e+08 0.0174391 9.25196e+06 1.1501e+08 1.31755e+07 22555 5.69474e+07 0 0.160908 0.993442 0.816126 1.14256e+08 0.00579263 2.45122e+07 2.59098e+07 2.49584e+07 322 2.48643e+07 8.4819e+06 0.00514031 2.47166e+07 49.851 0.0804448 0.994965 0 50.451 GTEX-1H1CY-0626-SM-9KNVE 2 B1 2 pieces; extensive alveolar edema & hemorrhage; 5.9 Lung Lung 0008952 1280 1232 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.990749 184593 0.972421 0.991974 0.703039 24751 1 76 0.00320732 163 0 9.1736e+07 0.0272461 431734 9.24782e+07 1.06451e+07 24792 4.56775e+07 0 0.269382 0.991974 0.697397 9.1736e+07 0.00394986 2.02769e+07 1.24384e+07 2.04098e+07 199 2.0408e+07 1.21037e+07 0.00357813 2.039e+07 49.9779 0.00466849 0.993199 0 50.1634 GTEX-1H1CY-0726-SM-9OSXX 2 B1 2 pieces; some areas are severely autolyzed 5.8 Thyroid Thyroid 0002046 1285 1227 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989953 244584 0.96144 0.992236 0.728108 26032 1 76 0.0032557 204 0 9.76618e+07 0.0382912 1.04173e+06 9.84259e+07 9.58204e+06 26082 4.85627e+07 0 0.233332 0.992236 0.722456 9.76618e+07 0.0043748 2.11057e+07 1.18583e+07 2.14238e+07 238 2.14398e+07 1.14376e+07 0.00381396 2.13042e+07 49.8414 0.0105839 0.99452 0 50.374 GTEX-1H1CY-0826-SM-9WYTU 1 B1 2 pieces; minimal fibrous content 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1286 1226 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991926 181555 0.97314 0.993313 0.773559 24242 1 76 0.00287777 207 0 8.97274e+07 0.0265731 798248 9.03315e+07 6.41825e+06 24274 4.46758e+07 0 0.199582 0.993313 0.768385 8.97274e+07 0.00490791 1.96964e+07 9.77418e+06 1.99151e+07 217 1.98864e+07 1.32389e+07 0.00389142 1.98513e+07 49.9559 0.00883687 0.994699 0 50.2761 GTEX-1H1CY-1926-SM-9WG7X 1 B1 6 partially fragmented pieces; atrophic; rare corpora albicantia 6.8 Ovary Ovary 0000992 1324 1188 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989932 229103 0.961162 0.992918 0.754859 23814 1 76 0.00269525 176 0 8.83605e+07 0.0386216 284014 8.89908e+07 6.54935e+06 23856 4.39426e+07 0 0.206302 0.992918 0.749513 8.83605e+07 0.00386129 1.90366e+07 1.13412e+07 1.92752e+07 198 1.92964e+07 1.49255e+07 0.00327652 1.9275e+07 49.9722 0.0031915 0.995903 0 50.3114 GTEX-1H1CY-2126-SM-9OSXV 1 B1 2 pieces; myometrium only; no endometrium 6.5 Uterus Uterus 0000995 1329 1183 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990147 271241 0.958606 0.992712 0.736508 25118 1 76 0.00287709 207 0 9.69164e+07 0.0411781 344857 9.76279e+07 9.6623e+06 25158 4.81948e+07 0 0.222098 0.992712 0.73114 9.69164e+07 0.00425988 2.0841e+07 1.20793e+07 2.10696e+07 243 2.10757e+07 1.33064e+07 0.0035667 2.10819e+07 50.0074 0.00353236 0.995277 0 50.2727 GTEX-1H1CY-2226-SM-9WG7E 1 B1 2 pieces; scattered ductal & lobular units; 80% fat 7.1 Breast Breast - Mammary Tissue 0008367 1335 1177 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989281 128360 0.973448 0.992403 0.740075 23332 1 76 0.00292575 116 0 5.51165e+07 0.026211 191453 5.55385e+07 4.12351e+06 23355 2.73957e+07 0 0.233373 0.992403 0.734452 5.51165e+07 0.00429758 1.21037e+07 4.96669e+06 1.22245e+07 118 1.22684e+07 8.68179e+06 0.00360951 1.22261e+07 49.9137 0.00344721 0.995524 0 50.2482 GTEX-1H1CY-2326-SM-9OSXW 1 B1 2 pieces; well dissected glands 6.8 Salivary Gland Minor Salivary Gland 0006330 1336 1176 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.988476 290471 0.965146 0.991613 0.72689 25652 1 76 0.00318117 245 0 9.36139e+07 0.0344558 525105 9.44056e+07 9.48017e+06 25697 4.65304e+07 0 0.238256 0.991613 0.720793 9.36139e+07 0.00465534 2.0633e+07 1.47772e+07 2.09131e+07 215 2.10135e+07 1.2552e+07 0.00391592 2.08117e+07 49.7587 0.00556222 0.994751 0 50.3371 GTEX-1H1CY-2426-SM-9YFML 1 B1 2 pieces: 1 with 60% perivascular stroma, other with 20% 7.9 Blood Vessel Artery - Tibial 0007610 1395 1117 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993243 289705 0.975188 0.99445 0.82456 22771 1 76 0.00266515 212 0 9.20899e+07 0.024288 272566 9.26039e+07 3.30634e+06 22795 4.58779e+07 0 0.150627 0.99445 0.819984 9.20899e+07 0.00368928 1.98862e+07 7.65691e+06 2.00478e+07 246 2.00582e+07 1.79562e+07 0.00317659 1.99841e+07 49.9075 0.00294335 0.995656 0 50.2023 GTEX-1H1CY-2526-SM-9WG6C 1 B1 2 pieces: 1 with 50% external & internal fat, other with 10% external fat 6.2 Nerve Nerve - Tibial 0001323 1396 1116 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989743 238488 0.965318 0.992378 0.707437 25490 1 76 0.00296225 176 0 9.23366e+07 0.0343431 401276 9.30458e+07 6.38591e+06 25536 4.59195e+07 0 0.257881 0.992378 0.702045 9.23366e+07 0.00435689 2.0111e+07 9.13178e+06 2.03193e+07 195 2.03771e+07 1.28741e+07 0.00365772 2.02833e+07 49.8847 0.00431267 0.995013 0 50.2576 GTEX-1H1CY-2626-SM-9MQKJ 1 B1 2 pieces: 1 with 5% neural tissue 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1398 1114 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983884 288680 0.97447 0.986287 0.783138 23001 1 76 0.00598197 136 0 7.00204e+07 0.0251926 262921 7.0994e+07 8.62044e+06 23027 3.48192e+07 0 0.191332 0.986287 0.772399 7.00204e+07 0.00748051 1.53e+07 6.74782e+06 1.54868e+07 144 1.55135e+07 1.14704e+07 0.00672941 1.54351e+07 49.8732 0.00370343 0.988689 0 50.3034 GTEX-1H1CY-2726-SM-9MQLR 1 B1 2 pieces; 5% internal fat 7.7 Muscle Muscle - Skeletal 0011907 1400 1112 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987279 315427 0.9814 0.989272 0.861563 19632 1 76 0.00568484 112 0 6.59164e+07 0.0183844 819493 6.66312e+07 7.38707e+06 19638 3.28175e+07 0 0.119837 0.989272 0.85232 6.59164e+07 0.00725628 1.41593e+07 5.74088e+06 1.43737e+07 124 1.44159e+07 1.42651e+07 0.00646898 1.42307e+07 49.6766 0.0122989 0.991265 0 50.3756 GTEX-1H1CY-2826-SM-9MQM3 1 B1 6 pieces: 1 with excess subcutaneous fat; others well trimmed 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1401 1111 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983319 295350 0.976994 0.98554 0.841108 22607 1 76 0.00609426 171 0 7.04239e+07 0.0226635 415969 7.14572e+07 8.91126e+06 22625 3.50399e+07 0 0.135886 0.98554 0.828945 7.04239e+07 0.00755513 1.51595e+07 8.98518e+06 1.5308e+07 147 1.53424e+07 1.2959e+07 0.00682305 1.52703e+07 49.8822 0.00582123 0.98776 0 50.2437 GTEX-1H1CY-3026-SM-9OSW7 1 B1 4 pieces 6.1 Brain Brain - Cerebellum 0002037 1429 1083 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990389 1.06588e+06 0.925192 0.992598 0.718403 24938 1 76 0.00325295 270 0 1.14042e+08 0.0744222 2.43242e+06 1.14893e+08 1.10166e+07 24972 5.67425e+07 0 0.206789 0.992598 0.713086 1.14042e+08 0.00414611 2.37397e+07 5.25081e+07 2.42302e+07 285 2.43313e+07 1.2262e+07 0.00369854 2.3871e+07 49.5226 0.0211712 0.994807 0 50.5112 GTEX-1H1DE-0002-SM-AG5YS B1 Blood Whole Blood 0013756 -30 BP-57064 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/07/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1DE-0005-SM-A9SK4 B1 7.1 Blood Whole Blood 0013756 -30 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.971214 893254 0.964531 0.972768 0.807403 19202 1 76 0.00667812 127 0 1.0995e+08 0.0340707 444321 1.13028e+08 2.12514e+07 19207 5.46712e+07 0 0.157128 0.972768 0.785416 1.0995e+08 0.00824336 2.50833e+07 1.53232e+08 2.53459e+07 164 2.53093e+07 2.7083e+07 0.00745949 2.53246e+07 50.0151 0.00393106 0.974322 0 50.2603 GTEX-1H1DE-0226-SM-ARZN8 1 B1 2 pieces, no abnormalities 6.9 Thyroid Thyroid 0002046 724 666 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988971 612076 0.965628 0.990757 0.712114 24401 1 76 0.00263773 122 0 6.69828e+07 0.0340893 142247 6.76077e+07 3.00931e+06 24449 3.32556e+07 0 0.253514 0.990757 0.705532 6.69828e+07 0.00368578 1.45847e+07 6.60779e+06 1.47815e+07 134 1.50102e+07 1.0372e+07 0.00316081 1.44637e+07 49.0729 0.00210401 0.992543 0 50.3351 GTEX-1H1DE-0826-SM-ARU8V 1 B1 2 pieces, vascular elements are ~5-10% of tissue 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 747 643 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992771 371015 0.97519 0.994 0.818524 22896 1 76 0.00206311 201 0 8.11389e+07 0.0245588 412565 8.16287e+07 2.62683e+06 22920 4.0435e+07 0 0.156666 0.994 0.813612 8.11389e+07 0.00282772 1.79088e+07 7.95474e+06 1.80617e+07 204 1.8107e+07 1.40685e+07 0.00244494 1.79543e+07 49.7883 0.00505416 0.995229 0 50.2126 GTEX-1H1DE-0926-SM-ARZN9 1 B1 6 pieces, confirmed target muscularis; trace 'contaminant squamous mcuosa, ~5-10% total, rep delineated 7.8 Esophagus Esophagus - Muscularis 0004648 757 633 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988798 786973 0.974047 0.990689 0.804509 22248 1 76 0.00250185 147 0 6.94929e+07 0.0256434 482403 7.0146e+07 3.1718e+06 22269 3.44787e+07 0 0.169538 0.990689 0.797018 6.94929e+07 0.00365023 1.49635e+07 7.15016e+06 1.51199e+07 152 1.54345e+07 1.23748e+07 0.00307494 1.47644e+07 48.8906 0.00687712 0.99258 0 50.26 GTEX-1H1DE-1026-SM-9JGH6 1 B1 6 pieces, squamous mucosa up to ~0.2mm, 10-15% thickness 8.7 Esophagus Esophagus - Mucosa 0006920 758 632 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993479 455416 0.97598 0.994613 0.790289 25127 1 76 0.00214714 381 0 1.34124e+08 0.0237221 391122 1.34851e+08 7.21818e+06 25168 6.68579e+07 0 0.185691 0.994613 0.786032 1.34124e+08 0.00286321 3.02052e+07 1.54499e+07 3.04561e+07 345 3.04902e+07 2.62892e+07 0.00250476 3.03156e+07 49.8564 0.00290041 0.995747 0 50.2069 GTEX-1H1DE-1226-SM-9JGHH 1 B1 6 pieces, muscularis only, mucosa sloughed, presumed autolyzed 7.2 Stomach Stomach 0000945 766 624 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994108 315308 0.974336 0.995347 0.820223 24215 1 76 0.00199182 385 0 1.2889e+08 0.0253911 609426 1.29493e+08 6.36386e+06 24248 6.42519e+07 0 0.154112 0.995347 0.816407 1.2889e+08 0.00303215 2.79677e+07 1.07831e+07 2.83415e+07 346 2.82864e+07 2.29215e+07 0.00251134 2.81713e+07 49.8981 0.00470625 0.996586 0 50.3319 GTEX-1H1DE-1326-SM-9KNUG 0 B1 6 pieces, adherent nubbins dermal fat up to ~5mm, rep delineated; squamous epithelium is ~60-70 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 769 621 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992753 443912 0.964084 0.994035 0.739982 25158 1 76 0.00270483 288 0 1.0954e+08 0.0357259 1.39888e+06 1.10198e+08 1.13923e+07 25209 5.45903e+07 0 0.224102 0.994035 0.735568 1.0954e+08 0.00402737 2.40771e+07 1.78514e+07 2.42245e+07 313 2.41968e+07 1.53603e+07 0.00336525 2.42444e+07 50.0492 0.0126943 0.995316 0 50.1526 GTEX-1H1DE-1426-SM-9JGHV 3 B1 6 pieces, glandular mucosa completely autolyzed, target lymphoid aggregates are ~10-20% tissue 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 771 619 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.992434 473248 0.96022 0.993844 0.72557 26944 1 76 0.00229156 376 0 1.22915e+08 0.0393865 430628 1.23676e+08 6.22975e+06 27020 6.12194e+07 0 0.23465 0.993844 0.721104 1.22915e+08 0.00348271 2.68168e+07 1.32536e+07 2.70206e+07 341 2.70197e+07 1.88625e+07 0.00288629 2.6983e+07 49.966 0.0034819 0.995255 0 50.1893 GTEX-1H1DE-1526-SM-ARL9B 2 B1 6 pieces, glandular mucosa up to ~0.2mm, partially sloughing 5.6 Colon Colon - Transverse 0001157 779 611 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.993852 321408 0.969025 0.993796 0.783084 23625 1 76 0.00200409 128 0 6.01884e+07 0.0306875 827222 6.05641e+07 3.70693e+06 23660 2.99673e+07 0 0.185941 0.993796 0.778226 6.01884e+07 0.00242576 1.32122e+07 8.51039e+06 1.32254e+07 145 1.33638e+07 8.17662e+06 0.00221493 1.30699e+07 49.4442 0.0136586 0.993741 0 50.0248 GTEX-1H1DE-1626-SM-9KNU5 1 B1 6 pieces, confirmed target muscularis. 6.5 Colon Colon - Sigmoid 0001159 785 605 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993103 198267 0.967796 0.994294 0.778511 24806 1 76 0.00269115 279 0 9.75142e+07 0.0319494 602758 9.80738e+07 1.1116e+07 24845 4.85929e+07 0 0.189286 0.994294 0.774069 9.75142e+07 0.00358755 2.09677e+07 8.83896e+06 2.1217e+07 278 2.11998e+07 1.49226e+07 0.00313881 2.10952e+07 49.8763 0.00614597 0.995485 0 50.2955 GTEX-1H1DE-1726-SM-A9G3G 0 B1 2 pieces, trace interstitial fat 7.9 Muscle Muscle - Skeletal 0011907 1024 366 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.99049 150370 0.985134 0.993991 0.889122 18738 1 76 0.00336962 202 0 7.75801e+07 0.014702 1.15951e+06 7.80491e+07 5.93045e+06 18743 3.86007e+07 0 0.0960116 0.993991 0.883779 7.75801e+07 0.00378181 1.72728e+07 1.02915e+07 1.72885e+07 202 1.74373e+07 1.49066e+07 0.00357231 1.73527e+07 49.8785 0.0148561 0.997492 0 50.0227 GTEX-1H1DE-1826-SM-9MQK8 0 B1 2 pieces, nerve is ~70% of specimen (delineated) rest is adherent/interstitial fat 6.2 Nerve Nerve - Tibial 0001323 1025 365 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984852 251491 0.965699 0.987046 0.719978 23924 1 76 0.00564152 136 0 6.86367e+07 0.0340587 327600 6.95375e+07 7.77643e+06 23957 3.41323e+07 0 0.245721 0.987046 0.710652 6.86367e+07 0.00698693 1.50256e+07 6.63039e+06 1.52075e+07 140 1.52194e+07 9.48319e+06 0.00631273 1.51569e+07 49.8972 0.00471113 0.989241 0 50.301 GTEX-1H1DE-1926-SM-9WG6P 0 B1 2 pieces, no atherosis/adherent fat 7.4 Blood Vessel Artery - Tibial 0007610 1027 363 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991815 291276 0.978189 0.99423 0.871279 22623 1 76 0.00226987 381 0 1.38926e+08 0.0214085 636701 1.39732e+08 1.02034e+07 22642 6.91431e+07 0 0.10691 0.99423 0.866252 1.38926e+08 0.00360767 2.96661e+07 1.14195e+07 3.00465e+07 368 3.00217e+07 2.97599e+07 0.00293715 3.00106e+07 49.9907 0.00455658 0.996645 0 50.3184 GTEX-1H1DE-2026-SM-9WG6Q 0 B1 2 pieces, barely trace fascia 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 1028 362 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992069 110442 0.979352 0.994216 0.812034 21546 1 76 0.00261102 168 0 6.97291e+07 0.0203041 506281 7.01348e+07 4.87511e+06 21567 3.47197e+07 0 0.167318 0.994216 0.807337 6.97291e+07 0.00352166 1.54423e+07 7.17117e+06 1.55899e+07 167 1.56116e+07 1.14706e+07 0.00306535 1.55595e+07 49.9165 0.00721868 0.996362 0 50.2378 GTEX-1H1DE-2126-SM-9WG6R 0 B1 6 pieces, no adherent fat; squamous epithelium is ~35-45 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1029 361 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992073 227451 0.97082 0.993975 0.770192 24522 1 76 0.0026667 223 0 9.58321e+07 0.0289591 738690 9.6413e+07 6.77713e+06 24560 4.77198e+07 0 0.200628 0.993975 0.765551 9.58321e+07 0.00349519 2.10893e+07 1.10864e+07 2.13805e+07 251 2.13902e+07 1.57368e+07 0.00308015 2.12511e+07 49.8369 0.00766173 0.995878 0 50.3429 GTEX-1H1DF-0001-SM-AG5YI C1 Blood Whole Blood 0013756 1276 BP-57064 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/07/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1DF-0005-SM-ADEGU C1 6.9 Blood Whole Blood 0013756 1276 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.978688 723758 0.966295 0.985248 0.774761 19704 1 76 0.00331025 139 0 9.01446e+07 0.0331447 426641 9.14943e+07 1.02167e+07 19716 4.46138e+07 0 0.191534 0.985248 0.763331 9.01446e+07 0.00332927 2.03084e+07 8.83117e+07 2.05787e+07 160 2.08537e+07 2.02282e+07 0.00331969 2.05998e+07 49.6938 0.00466303 0.991807 0 50.3305 GTEX-1H1DF-0011-R9b-SM-CM2RN C1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 1289 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993127 213679 0.960093 0.994406 0.842369 20631 1 76 0.00175599 295 0 7.21642e+07 0.0397146 8.74957e+06 7.25701e+07 4.65056e+06 20642 3.59523e+07 0 0.117724 0.994406 0.837657 7.21642e+07 0.00266553 1.59672e+07 9.17218e+06 1.65018e+07 264 1.61786e+07 7.3188e+06 0.00221018 1.6368e+07 50.291 0.120567 0.995684 0 50.8233 GTEX-1H1DF-0226-SM-ARL9A 1 C1 2 pieces; 1 with 10% fibrous content 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1385 1070 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.995337 569325 0.97429 0.995302 0.760124 23499 1 76 0.00173769 279 0 9.28836e+07 0.025349 525764 9.33219e+07 2.99594e+06 23542 4.62818e+07 0 0.214167 0.995302 0.756553 9.28836e+07 0.00209966 2.05642e+07 1.00449e+07 2.04972e+07 260 2.06288e+07 1.60842e+07 0.00191868 2.04291e+07 49.7568 0.00563387 0.995268 0 49.9185 GTEX-1H1DF-0326-SM-B2LW6 1 C1 2 pieces; well trimmed; 10% internal and external fat 6.4 Nerve Nerve - Tibial 0001323 1392 1063 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.988533 700425 0.966477 0.990336 0.685839 23902 1 76 0.00268039 161 0 7.26061e+07 0.0332587 222807 7.33147e+07 3.48878e+06 23941 3.60815e+07 0 0.280638 0.990336 0.679211 7.26061e+07 0.00395671 1.59997e+07 6.81727e+06 1.59894e+07 156 1.60435e+07 9.80752e+06 0.00331739 1.60724e+07 50.045 0.00303905 0.992138 0 49.9839 GTEX-1H1DF-0526-SM-9JGG5 1 C1 2 pieces; moderate atrophy & fibrosis 7.4 Muscle Muscle - Skeletal 0011907 1399 1057 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 EXCLUDE 0.989429 80970 0.972516 0.990809 0.815113 21933 1 76 0.00444905 98 0 5.44639e+07 0.0272206 379624 5.49691e+07 6.61608e+06 21946 2.71398e+07 0 0.157404 0.990809 0.807621 5.44639e+07 0.00376377 1.15462e+07 4.98395e+06 1.17663e+07 114 1.17719e+07 1.04438e+07 0.00410689 1.1609e+07 49.6515 0.00690613 0.992189 0 50.4721 GTEX-1H1DF-1026-SM-9QEJ1 2 C1 2 pieces; well dissected 7.3 Thyroid Thyroid 0002046 1411 1048 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990439 253767 0.968263 0.993195 0.806856 22982 1 76 0.00180138 143 0 7.0616e+07 0.0314364 278773 7.10998e+07 3.67301e+06 23003 3.51275e+07 0 0.161407 0.993195 0.801366 7.0616e+07 0.00381877 1.54462e+07 8.92602e+06 1.553e+07 163 1.56002e+07 1.31392e+07 0.00280727 1.55593e+07 49.9344 0.00392087 0.995951 0 50.1352 GTEX-1H1DF-1126-SM-9WG7G 1 C1 6 pieces; well trimmed; 20% dermal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1413 1047 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989648 201964 0.973391 0.992786 0.789629 24082 1 76 0.00239216 216 0 9.02806e+07 0.0262901 544907 9.09366e+07 6.2886e+06 24116 4.49013e+07 0 0.183762 0.992786 0.783933 9.02806e+07 0.00390315 1.9837e+07 9.31765e+06 2.00275e+07 224 2.00862e+07 1.59031e+07 0.00314527 2.00465e+07 49.9505 0.00599216 0.995925 0 50.2389 GTEX-1H1DF-1326-SM-9WPPR 2 C1 2 pieces; central congestion and moderate macrovesicular steatosis 6.4 Liver Liver 0001114 1416 1045 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 EXCLUDE 0.989036 202819 0.976778 0.990608 0.857576 19389 1 76 0.00611686 196 0 7.60757e+07 0.0230429 2.92199e+06 7.6797e+07 1.1619e+07 19399 3.79002e+07 0 0.119202 0.990608 0.849522 7.60757e+07 0.00671746 1.68826e+07 1.43864e+07 1.70785e+07 230 1.70528e+07 8.38798e+06 0.00641669 1.70081e+07 49.9343 0.0380483 0.99218 0 50.2885 GTEX-1H1DF-1426-SM-9YFMC 1 C1 2 pieces; <5% fibrous content 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1417 1045 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.991929 244348 0.975897 0.993423 0.760242 23492 1 76 0.00258186 214 0 9.70433e+07 0.0237991 761984 9.76858e+07 3.71932e+06 23523 4.83243e+07 0 0.215655 0.993423 0.755242 9.70433e+07 0.00367385 2.14277e+07 1.21734e+07 2.15814e+07 250 2.157e+07 1.55307e+07 0.00312703 2.15871e+07 50.0198 0.00780036 0.994917 0 50.1787 GTEX-1H1DG-0001-SM-AG5YP C1 Blood Whole Blood 0013756 859 BP-57064 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/07/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1DG-0006-SM-ARZL4 C1 7.7 Blood Whole Blood 0013756 859 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.951697 625215 0.971335 0.954705 0.799881 14346 1 76 0.00217155 79 0 6.77935e+07 0.0277756 73711 7.10099e+07 2.59299e+06 14347 3.34831e+07 0 0.171454 0.954705 0.76365 6.77935e+07 0.00367711 1.58476e+07 1.48703e+08 1.62923e+07 110 1.66269e+07 2.18744e+07 0.00292196 1.57516e+07 48.6483 0.00103804 0.957713 0 50.6917 GTEX-1H1DG-0011-R10b-SM-CE6S7 C1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 880 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989509 857831 0.960676 0.991119 0.84238 24198 1 76 0.00755573 200 0 9.03843e+07 0.0389132 2.40204e+06 9.11941e+07 1.36945e+07 24218 4.4962e+07 0 0.118297 0.991119 0.834899 9.03843e+07 0.00747591 1.97121e+07 1.67512e+07 1.98621e+07 254 1.9927e+07 1.19012e+07 0.00751588 1.97772e+07 49.8113 0.0263399 0.99273 0 50.1895 GTEX-1H1DG-0011-R11a-SM-C1YQK C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 880 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988359 613952 0.950366 0.99083 0.760685 24369 1 76 0.00193498 269 0 9.373e+07 0.049259 1.78e+06 9.45974e+07 4.11861e+06 24394 4.66294e+07 0 0.189682 0.99083 0.753709 9.373e+07 0.00231114 2.02232e+07 1.32584e+07 2.03966e+07 294 2.04595e+07 1.1449e+07 0.00212259 2.03612e+07 49.8796 0.0188166 0.993301 0 50.2133 GTEX-1H1DG-0011-R1b-SM-CKZP1 C1, A1 6.8 Brain Brain - Hippocampus 0001954 880 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991776 714439 0.955196 0.993942 0.814314 24274 1 76 0.00189276 274 0 8.86529e+07 0.0445181 3.8821e+06 8.91932e+07 8.16395e+06 24304 4.41463e+07 0 0.140881 0.993942 0.809381 8.86529e+07 0.00319408 1.93009e+07 1.99821e+07 1.96579e+07 330 1.96282e+07 1.07911e+07 0.002542 1.95054e+07 49.8431 0.0435246 0.996108 0 50.4582 GTEX-1H1DG-0011-R2a-SM-ADEIQ C1, A1 7.8 Brain Brain - Substantia nigra 0002038 880 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.98239 549730 0.959393 0.989173 0.814651 23195 1 76 0.00320947 219 0 8.03098e+07 0.0403216 2.74876e+06 8.11889e+07 8.46771e+06 23222 3.97819e+07 0 0.144742 0.989173 0.805831 8.03098e+07 0.0035641 1.74709e+07 1.22564e+07 1.79572e+07 251 1.80412e+07 1.07858e+07 0.00338557 1.7868e+07 49.7589 0.0338564 0.995955 0 50.6863 GTEX-1H1DG-0011-R4a-SM-CE6RQ C1, A1 6.5 Brain Brain - Amygdala 0001876 880 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.984632 475440 0.963988 0.986527 0.8386 22149 1 76 0.00753835 136 0 6.18313e+07 0.0358435 5.60602e+06 6.26757e+07 9.84544e+06 22160 3.0749e+07 0 0.125388 0.986527 0.827302 6.18313e+07 0.0075978 1.34995e+07 1.74384e+07 1.38227e+07 167 1.37655e+07 4.98464e+06 0.00756802 1.36562e+07 49.8007 0.0894448 0.988422 0 50.5914 GTEX-1H1DG-0011-R5b-SM-CJI33 C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 880 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993395 1.34736e+06 0.952509 0.994494 0.809143 24951 1 76 0.00187118 372 0 1.13153e+08 0.0471925 4.70624e+06 1.1378e+08 6.69361e+06 24979 5.63608e+07 0 0.143366 0.994494 0.804688 1.13153e+08 0.00237698 2.41608e+07 3.68231e+07 2.47342e+07 348 2.47793e+07 1.36603e+07 0.0021238 2.42356e+07 49.4454 0.0413627 0.995592 0 50.5864 GTEX-1H1DG-0011-R6a-SM-A9SK8 C1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 880 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989793 1.04511e+06 0.94911 0.991538 0.800353 26097 1 76 0.00609781 269 0 1.13792e+08 0.0505356 4.20595e+06 1.14763e+08 1.85422e+07 26133 5.66479e+07 0 0.148757 0.991538 0.79358 1.13792e+08 0.00803137 2.43505e+07 3.51243e+07 2.47333e+07 315 2.47282e+07 1.35503e+07 0.00706289 2.45231e+07 49.7918 0.036649 0.993283 0 50.39 GTEX-1H1DG-0011-R7b-SM-A96RR C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 880 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993137 634697 0.958038 0.994594 0.82416 23174 1 76 0.00177188 267 0 8.18556e+07 0.0417209 4.36755e+06 8.23005e+07 2.82375e+06 23186 4.07862e+07 0 0.133878 0.994594 0.819705 8.18556e+07 0.00211431 1.76891e+07 2.44282e+07 1.80415e+07 277 1.79976e+07 8.37278e+06 0.00194284 1.78394e+07 49.7793 0.0530683 0.996052 0 50.493 GTEX-1H1DG-0011-R8a-SM-CL54Z C1, A1 7 Brain Brain - Hypothalamus 0001898 880 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993269 771926 0.961381 0.994918 0.823065 25806 1 76 0.00252154 381 0 1.31189e+08 0.0382985 6.03705e+06 1.31859e+08 1.68474e+07 25838 6.53427e+07 0 0.138316 0.994918 0.818883 1.31189e+08 0.00353321 2.85613e+07 2.26325e+07 2.93552e+07 375 2.92817e+07 1.62013e+07 0.00302653 2.88227e+07 49.605 0.0457843 0.996568 0 50.6854 GTEX-1H1DG-0011-R9b-SM-ACKVB C1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 880 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992957 417849 0.962611 0.994621 0.836298 21355 1 76 0.0024643 282 0 8.57457e+07 0.0372351 7.10357e+06 8.62094e+07 1.12554e+07 21366 4.27204e+07 0 0.126313 0.994621 0.8318 8.57457e+07 0.00354183 1.8618e+07 2.87395e+07 1.91668e+07 329 1.88791e+07 6.44922e+06 0.00300216 1.9018e+07 50.1832 0.082399 0.996285 0 50.7263 GTEX-1H1DG-0126-SM-9WYU2 0 C1 6 pieces, adherent dermal fat up to ~1mm nubbins, rep delineated; squamous epithelium is ~50 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 945 1412 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993619 229849 0.977819 0.994819 0.799022 22901 1 76 0.00242425 239 0 8.92818e+07 0.0218985 393465 8.97468e+07 6.07660e+06 22934 4.44901e+07 0 0.178797 0.994819 0.794882 8.92818e+07 0.00438383 1.9554e+07 9.29526e+06 1.97209e+07 216 1.97184e+07 1.60214e+07 0.00340286 1.96622e+07 49.9287 0.00438417 0.99602 0 50.2125 GTEX-1H1DG-0326-SM-9QEHK 0 C1 2 pieces; interstitial fat/vascular elemements are ~10% tissue 7.7 Muscle Muscle - Skeletal 0011907 949 1409 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991644 228623 0.980159 0.994398 0.860724 20244 1 76 0.0015195 274 0 1.05569e+08 0.0196291 759953 1.06163e+08 5.35652e+06 20258 5.25641e+07 0 0.119435 0.994398 0.855902 1.05569e+08 0.00345512 2.29297e+07 1.04636e+07 2.31989e+07 313 2.32569e+07 2.15530e+07 0.00248463 2.31166e+07 49.8487 0.00715833 0.997152 0 50.2918 GTEX-1H1DG-0426-SM-9WG6D 0 C1 2 pieces, nubbins of adherent fat up to ~0.5mm, rep delineated 5.7 Nerve Nerve - Tibial 0001323 955 1403 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.988598 138989 0.963867 0.991255 0.703444 22517 1 76 0.00278388 127 0 5.41834e+07 0.0359034 250395 5.46614e+07 4.31211e+06 22551 2.69366e+07 0 0.260423 0.991255 0.697292 5.41834e+07 0.00378643 1.17703e+07 5.21707e+06 1.19132e+07 122 1.19276e+07 7.1824e+06 0.00328381 1.18928e+07 49.927 0.00458084 0.993911 0 50.3019 GTEX-1H1DG-0526-SM-9YFLN 0 C1 2 pieces, gynecomastoid stromal hyerplasia, rare ductal elements noted, rep delineated 6.9 Breast Breast - Mammary Tissue 0008367 988 1371 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.99271 209037 0.980939 0.994195 0.834402 22550 1 76 0.00250988 180 0 7.91791e+07 0.0184998 239208 7.96414e+07 5.10704e+06 22576 3.94354e+07 0 0.146537 0.994195 0.829559 7.91791e+07 0.00346976 1.75231e+07 8.62261e+06 1.76394e+07 187 1.76293e+07 1.63119e+07 0.0029891 1.7655e+07 50.0365 0.00300356 0.99568 0 50.1654 GTEX-1H1DG-0726-SM-A96TN 1 C1 2 pieces, no abnormalities 6.5 Thyroid Thyroid 0002046 1001 1359 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992258 247815 0.971451 0.99381 0.777511 21994 1 76 0.00196364 117 0 5.31306e+07 0.0282891 66345 5.34615e+07 1.86997e+06 22007 2.64612e+07 0 0.19394 0.99381 0.772698 5.31306e+07 0.00269533 1.16842e+07 4.81775e+06 1.17678e+07 124 1.17696e+07 9.2387e+06 0.00232892 1.17624e+07 49.9848 0.00124099 0.995361 0 50.1781 GTEX-1H1DG-0826-SM-9QEIW 1 C1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 1012 1348 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990168 212959 0.978586 0.993384 0.820186 21859 1 76 0.00170791 266 0 8.5332e+07 0.0212327 3.07209e+06 8.59003e+07 4.09088e+06 21879 4.24573e+07 0 0.1584 0.993384 0.814759 8.5332e+07 0.00387595 1.81612e+07 1.01945e+07 1.83908e+07 292 1.84641e+07 1.17214e+07 0.00278842 1.83201e+07 49.8043 0.0357634 0.996599 0 50.314 GTEX-1H1DG-1026-SM-9MQJS 1 C1 2 pieces, patchy mild/moderate congestion/edema 6.8 Lung Lung 0008952 1015 1348 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.983457 333218 0.972652 0.986074 0.765856 22601 1 76 0.00594163 130 0 6.42648e+07 0.026939 279572 6.51724e+07 8.1302e+06 22631 3.19314e+07 0 0.206796 0.986074 0.755191 6.42648e+07 0.00756485 1.40877e+07 5.53043e+06 1.42287e+07 135 1.42534e+07 1.02643e+07 0.00675109 1.42231e+07 49.9468 0.00428973 0.98869 0 50.2489 GTEX-1H1DG-1226-SM-9JGH3 1 C1 5 pieces, squamous mucosa up to ~0.2mm, ~10-30% thickness 5.8 Esophagus Esophagus - Mucosa 0006920 1020 1343 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993608 283109 0.971566 0.994907 0.820095 23359 1 76 0.00196092 371 0 1.27645e+08 0.0282581 1.18583e+06 1.28299e+08 6.0783e+06 23387 6.364e+07 0 0.15147 0.994907 0.815918 1.27645e+08 0.00324846 2.85565e+07 1.38733e+07 2.8874e+07 368 2.88024e+07 1.64535e+07 0.00260385 2.87857e+07 49.9855 0.00924276 0.996206 0 50.2764 GTEX-1H1DG-1426-SM-9OSXP 1 C1 2 pieces, Islets visible, just beginning to degrade 6.8 Pancreas Pancreas 0001150 1022 1342 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.992353 261751 0.975592 0.994467 0.822695 21113 1 76 0.00268775 125 0 8.74764e+07 0.0241424 171304 8.79631e+07 8.05997e+06 21130 4.35538e+07 0 0.152897 0.994467 0.818143 8.74764e+07 0.00386222 2.00389e+07 2.30581e+07 2.02994e+07 141 2.0319e+07 2.40231e+07 0.00327374 2.02068e+07 49.8616 0.00194745 0.996581 0 50.3228 GTEX-1H1DG-2026-SM-9QEIV 1 C1 2 pieces, trace fascia/vascular elements, rep delineated 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1032 1336 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990476 227306 0.976446 0.993237 0.817749 23209 1 76 0.00188298 209 0 8.26138e+07 0.0231446 240594 8.31763e+07 4.15708e+06 23239 4.11029e+07 0 0.158697 0.993237 0.812219 8.26138e+07 0.00386407 1.80909e+07 7.70858e+06 1.8236e+07 218 1.83221e+07 1.55773e+07 0.00287077 1.82153e+07 49.8538 0.00289258 0.995999 0 50.1998 GTEX-1H1DG-2126-SM-9WPPB 2 C1 6 pieces, glandular mucosa ~0.75mm thick,with moderate-advanced autolysis, , ~30% thickness 5.9 Stomach Stomach 0000945 1035 1333 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.980936 154408 0.982278 0.982485 0.860744 22065 1 76 0.00615465 225 0 7.16758e+07 0.0171655 450539 7.29535e+07 1.16257e+07 22080 3.56816e+07 0 0.121534 0.982485 0.845668 7.16758e+07 0.00688023 1.65748e+07 6.55994e+07 1.68097e+07 165 1.68141e+07 1.84356e+07 0.00651687 1.66808e+07 49.801 0.0061757 0.984034 0 50.3519 GTEX-1H1DG-2226-SM-9WPPC 3 C1 6 pieces, mucosa ~0.4mm, ~30% thickness, advanced glandular autolysis 5.6 Colon Colon - Transverse 0001157 1039 1330 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986989 167347 0.970753 0.988708 0.801959 23936 1 76 0.00645323 126 0 6.26388e+07 0.0286465 406083 6.33541e+07 9.99235e+06 23952 3.11643e+07 0 0.168794 0.988708 0.792904 6.26388e+07 0.0073903 1.36392e+07 7.30315e+06 1.37805e+07 133 1.37614e+07 1.02141e+07 0.00692095 1.37642e+07 50.005 0.00640973 0.990428 0 50.2577 GTEX-1H1DG-2426-SM-9QEHJ 0 C1 6 pieces, squamous epithelium is ~40-50 microns, minimal dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1045 1324 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.989445 178941 0.974755 0.992433 0.790589 23299 1 76 0.00186521 163 0 7.45609e+07 0.0250004 288965 7.51295e+07 3.67753e+06 23327 3.70938e+07 0 0.184166 0.992433 0.784606 7.45609e+07 0.0040872 1.63864e+07 7.87915e+06 1.64704e+07 172 1.65398e+07 1.30857e+07 0.00297286 1.65211e+07 49.9717 0.00384623 0.99542 0 50.1278 GTEX-1H1DG-2726-SM-9JGI1 2 C1 "2 pieces, markedly reduced spermatogenesis, ""Serotoli only""" 6.1 Testis Testis 0000473 1051 1320 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991846 572651 0.954679 0.993302 0.728679 32878 1 76 0.00213261 376 0 1.36245e+08 0.045073 3.06429e+06 1.37163e+08 6.80878e+06 32965 6.78681e+07 0 0.226001 0.993302 0.723798 1.36245e+08 0.00323566 2.96077e+07 1.57834e+07 2.98842e+07 360 2.99158e+07 1.77677e+07 0.00268333 2.97537e+07 49.8641 0.0223404 0.994758 0 50.2324 GTEX-1H1DG-2826-SM-9JGHB 1 C1 4 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 1056 1316 BP-59409 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.990252 365783 0.948013 0.991553 0.734652 24644 1 76 0.00215085 268 0 1.05549e+08 0.0516751 1.95218e+06 1.06449e+08 5.29295e+06 24687 5.25936e+07 0 0.213361 0.991553 0.728446 1.05549e+08 0.00297614 2.2859e+07 1.45473e+07 2.3063e+07 295 2.30746e+07 1.16354e+07 0.00256295 2.29664e+07 49.8824 0.0183392 0.992854 0 50.2221 GTEX-1H1DG-2926-SM-9WYU3 1 C1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1058 1315 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992836 259394 0.967831 0.994688 0.839946 24059 1 76 0.00229408 268 0 9.82786e+07 0.0317913 3.07776e+06 9.88035e+07 6.7459e+06 24083 4.8952e+07 0 0.127884 0.994688 0.835484 9.82786e+07 0.00444842 2.1601e+07 1.20013e+07 2.19106e+07 329 2.18597e+07 1.21693e+07 0.00336925 2.18045e+07 49.9367 0.0311503 0.99654 0 50.3557 GTEX-1H1DG-3026-SM-A8N9V 1 C1 1 piece, adenohypophysis 7.5 Pituitary Pituitary 0000007 1058 1315 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984292 423909 0.959935 0.986902 0.762251 25431 1 76 0.0107774 138 0 8.6649e+07 0.039782 225059 8.7799e+07 1.57809e+07 25463 4.30489e+07 0 0.197684 0.986902 0.752267 8.6649e+07 0.011394 1.8677e+07 1.90809e+07 1.89004e+07 155 1.89892e+07 1.38214e+07 0.0110849 1.8819e+07 49.775 0.00256334 0.989512 0 50.2972 GTEX-1H1E6-0001-SM-AG5YO B1 Blood Whole Blood 0013756 -103 BP-57064 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/07/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1E6-0005-SM-ARZL5 B1 8.5 Blood Whole Blood 0013756 -103 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985741 1.09258e+06 0.952231 0.988082 0.806278 17322 1 76 0.00247906 108 0 6.2178e+07 0.0473993 288674 6.2928e+07 2.802e+06 17330 3.07971e+07 0 0.145953 0.988082 0.796669 6.2178e+07 0.00384337 1.35361e+07 3.73628e+07 1.3718e+07 124 1.40715e+07 1.32858e+07 0.0031596 1.33334e+07 48.6534 0.00458737 0.990422 0 50.3336 GTEX-1H1E6-0226-SM-A8N7Y 0 B1 2 pieces; congested, one piece includes capsule (target is 5mm below capsule) 6.8 Spleen Spleen 0002106 140 456 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986167 423455 0.958591 0.988301 0.739217 25871 1 76 0.0112694 205 0 9.85465e+07 0.0408237 807285 9.9713e+07 1.84163e+07 25913 4.89766e+07 0 0.219373 0.988301 0.730569 9.85465e+07 0.0106222 2.14555e+07 1.77278e+07 2.1718e+07 203 2.17671e+07 1.35034e+07 0.0109465 2.16111e+07 49.8201 0.00809608 0.990434 0 50.304 GTEX-1H1E6-0326-SM-9OSWE 0 B1 2 pieces; trivial attachment of fibrous tissue/skeletal muscle 7.4 Thyroid Thyroid 0002046 144 452 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989902 272037 0.967683 0.992912 0.757631 24420 1 76 0.00243006 205 0 8.76374e+07 0.0320315 315968 8.82631e+07 8.3683e+06 24459 4.35948e+07 0 0.210052 0.992912 0.752261 8.76374e+07 0.00356311 1.91389e+07 8.73842e+06 1.93147e+07 217 1.94115e+07 1.47722e+07 0.00299487 1.92868e+07 49.8388 0.00357984 0.995921 0 50.2285 GTEX-1H1E6-0426-SM-9WYUS 0 B1 6 pieces; relatively well trimmed 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 147 449 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993662 190511 0.969648 0.995138 0.801002 23060 1 76 0.00231189 150 0 6.46057e+07 0.0301549 830359 6.49214e+07 4.61033e+06 23075 3.2193e+07 0 0.168647 0.995138 0.797107 6.46057e+07 0.00441303 1.42156e+07 7.3401e+06 1.43982e+07 159 1.43404e+07 9.95882e+06 0.0033609 1.43624e+07 50.0384 0.0127902 0.996613 0 50.3191 GTEX-1H1E6-0526-SM-9WPQ3 0 B1 2 pieces; excellent specimen, well preserved 8.1 Prostate Prostate 0002367 145 451 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988902 192962 0.966562 0.990592 0.783254 25013 1 76 0.00615359 163 0 8.18564e+07 0.0331159 410668 8.26338e+07 1.24626e+07 25046 4.07657e+07 0 0.183308 0.990592 0.775886 8.18564e+07 0.00670533 1.8012e+07 9.70306e+06 1.81697e+07 176 1.81684e+07 1.24219e+07 0.00642899 1.81405e+07 49.9616 0.00496974 0.992283 0 50.218 GTEX-1H1E6-0626-SM-9OSWF 0 B1 2 pieces; spermatogenesis is present 7.1 Testis Testis 0000473 164 432 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.988053 376048 0.935532 0.991354 0.737027 33901 1 76 0.00253968 280 0 1.06037e+08 0.064165 1.37329e+06 1.06961e+08 1.10325e+07 33970 5.27264e+07 0 0.198505 0.991354 0.730655 1.06037e+08 0.00339717 2.22839e+07 1.37921e+07 2.2442e+07 262 2.25895e+07 1.67657e+07 0.002967 2.24444e+07 49.8389 0.0128392 0.994655 0 50.1767 GTEX-1H1E6-0726-SM-9WPQ4 0 B1 2 pieces; many pigmented macrophages present, some collapse, lymphocytic and focal acute inflammatory infiltrate 7.7 Lung Lung 0008952 162 434 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987912 214169 0.974364 0.98968 0.805523 23984 1 76 0.00646566 163 0 7.9866e+07 0.0252669 540535 8.06988e+07 1.30309e+07 24016 3.97691e+07 0 0.168841 0.98968 0.79721 7.9866e+07 0.00711843 1.7738e+07 8.16311e+06 1.79022e+07 172 1.78843e+07 1.31262e+07 0.00679146 1.78842e+07 49.9998 0.00669818 0.991448 0 50.2304 GTEX-1H1E6-0826-SM-9WG83 1 B1 2 pieces; includes 5-10% fat 8.6 Pancreas Pancreas 0001150 167 429 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.993258 211199 0.977437 0.99509 0.846405 21359 1 76 0.002277 116 0 8.18493e+07 0.0223083 270783 8.22532e+07 5.56940e+06 21373 4.07752e+07 0 0.131032 0.99509 0.842249 8.18493e+07 0.00312971 1.88257e+07 1.75072e+07 1.89595e+07 136 1.89572e+07 2.41385e+07 0.00270257 1.89768e+07 50.0259 0.00329207 0.996922 0 50.1771 GTEX-1H1E6-0926-SM-9YFLT 0 B1 2 pieces; dense fibrocollagenous stroma with scattered ducts, small portion of fat 6.7 Breast Breast - Mammary Tissue 0008367 169 427 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.99355 247959 0.965368 0.994737 0.742061 25183 1 76 0.00240198 177 0 8.54796e+07 0.0343123 342662 8.59318e+07 3.05491e+06 25225 4.25962e+07 0 0.223307 0.994737 0.738156 8.54796e+07 0.00334496 1.87566e+07 6.93072e+06 1.88797e+07 196 1.8897e+07 1.38002e+07 0.00287291 1.88358e+07 49.9189 0.0039876 0.995925 0 50.1636 GTEX-1H1E6-1026-SM-9JGFZ 0 B1 2 pieces; cortex and medulla with 5-10% attached fat 9 Adrenal Gland Adrenal Gland 0002369 171 425 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.992252 90330 0.977177 0.993817 0.84075 21183 1 76 0.00453298 105 0 5.70897e+07 0.0225133 1.40212e+06 5.74449e+07 7.51711e+06 21194 2.84437e+07 0 0.136427 0.993817 0.835551 5.70897e+07 0.00401156 1.23667e+07 6.38707e+06 1.29237e+07 134 1.29185e+07 9.08374e+06 0.00427268 1.24479e+07 49.0725 0.024408 0.995381 0 51.1012 GTEX-1H1E6-1126-SM-9JGGV 1 B1 2 pieces; lobulated fat with up to 30% vessels/fibrous tissue, scattered inflammatory cells 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 172 424 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994095 316495 0.976161 0.995352 0.82312 23816 1 76 0.00179668 379 0 1.15661e+08 0.0235991 1.17013e+06 1.16201e+08 5.96941e+06 23842 5.76617e+07 0 0.153041 0.995352 0.819294 1.15661e+08 0.00285897 2.54538e+07 1.06526e+07 2.58245e+07 367 2.57415e+07 1.84576e+07 0.00232716 2.56674e+07 49.9279 0.0100699 0.996608 0 50.3615 GTEX-1H1E6-1326-SM-9WPQ5 1 B1 6 pieces; target muscularis with focal acute inflammation and hemorrhage within adventitia 9 Esophagus Esophagus - Muscularis 0004648 181 415 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989362 193400 0.978132 0.990947 0.844241 22490 1 76 0.00611035 173 0 8.34774e+07 0.0215453 739233 8.42401e+07 1.31939e+07 22503 4.15833e+07 0 0.133891 0.990947 0.836597 8.34774e+07 0.0066327 1.80795e+07 8.0806e+06 1.82018e+07 198 1.8189e+07 1.51622e+07 0.00637111 1.82135e+07 50.0338 0.00877531 0.992532 0 50.1686 GTEX-1H1E6-1426-SM-9QEHO 1 B1 6 pieces; target muscularis 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 185 411 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990693 245859 0.975875 0.993633 0.843996 21036 1 76 0.00160444 168 0 6.87732e+07 0.0238622 926816 6.92139e+07 3.45809e+06 21049 3.42209e+07 0 0.131879 0.993633 0.838623 6.87732e+07 0.00374312 1.4856e+07 6.28919e+06 1.49607e+07 183 1.49933e+07 1.14253e+07 0.00267062 1.49998e+07 50.0107 0.0133906 0.996574 0 50.1755 GTEX-1H1E6-1526-SM-9QEHP 1 B1 6 pieces; focal early atheromatous change 7.8 Blood Vessel Artery - Aorta 0001496 189 407 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.991449 373175 0.96849 0.994275 0.838651 21834 1 76 0.00159865 213 0 8.53181e+07 0.0311452 325535 8.58094e+07 4.12401e+06 21853 4.24614e+07 0 0.129838 0.994275 0.83385 8.53181e+07 0.00372445 1.83545e+07 1.39232e+07 1.8534e+07 238 1.85869e+07 1.67555e+07 0.00265853 1.85257e+07 49.9175 0.0037937 0.997101 0 50.2432 GTEX-1H1E6-1626-SM-9OSWC 2 B1 6 pieces; mucosa and muscularis, few lymphoid aggregates 6.7 Stomach Stomach 0000945 192 404 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.986717 209425 0.980785 0.989376 0.85363 23122 1 76 0.002212 431 0 1.02936e+08 0.0188886 1.55665e+06 1.04042e+08 9.75031e+06 23144 5.12226e+07 0 0.127155 0.989376 0.844561 1.02936e+08 0.00356749 2.34072e+07 1.00725e+08 2.37791e+07 345 2.36941e+07 2.30741e+07 0.00288792 2.37269e+07 50.0346 0.0149618 0.992034 0 50.394 GTEX-1H1E6-1726-SM-ACKVK 1 B1 6 pieces; well trimmed, trivial fat only, epidermis measures 37 micorns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 200 396 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991937 267171 0.972685 0.993593 0.771477 25087 1 76 0.00279012 290 0 1.02649e+08 0.0270367 1.15708e+06 1.03311e+08 1.37122e+07 25128 5.11187e+07 0 0.201208 0.993593 0.766534 1.02649e+08 0.00339582 2.2521e+07 1.1167e+07 2.27388e+07 274 2.27467e+07 1.6246e+07 0.00309246 2.26716e+07 49.9173 0.0111999 0.995248 0 50.2407 GTEX-1H1E6-1826-SM-A9G21 2 B1 6 pieces; target muscularis 8.1 Colon Colon - Sigmoid 0001159 204 392 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987142 246845 0.975946 0.99191 0.833405 22734 1 76 0.00370998 216 0 8.78336e+07 0.0237354 722208 8.855e+07 8.36245e+06 22753 4.3621e+07 0 0.142541 0.99191 0.826663 8.78336e+07 0.0035189 1.89656e+07 8.41636e+06 1.92997e+07 249 1.93948e+07 1.52283e+07 0.00361615 1.9237e+07 49.7958 0.00815593 0.996678 0 50.4366 GTEX-1H1E6-1926-SM-9OSWD 1 B1 6 pieces; variable composition of mucosa, submucosa, muscularis 7.7 Colon Colon - Transverse 0001157 205 391 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.98836 303793 0.974112 0.991829 0.819612 24339 1 76 0.00260967 286 0 1.08275e+08 0.0248921 1.87531e+06 1.09167e+08 1.09381e+07 24378 5.37962e+07 0 0.154499 0.991829 0.812916 1.08275e+08 0.00367407 2.39343e+07 1.65075e+07 2.41527e+07 316 2.42101e+07 1.60499e+07 0.00314001 2.41998e+07 49.9894 0.0171785 0.995298 0 50.227 GTEX-1H1E6-2026-SM-9KNVK 1 B1 2 pieces; fat with 5-10% dense fibrous tissue/vessels/nerve 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 208 388 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993619 255036 0.976872 0.994927 0.820072 23396 1 76 0.0023531 283 0 1.03307e+08 0.0227357 875001 1.03834e+08 1.11833e+07 23427 5.14849e+07 0 0.1568 0.994927 0.815912 1.03307e+08 0.00357559 2.28472e+07 1.06615e+07 2.30008e+07 308 2.30292e+07 1.72404e+07 0.00296354 2.29474e+07 49.911 0.00842693 0.996234 0 50.1675 GTEX-1H1E6-2126-SM-9KNVM 1 B1 2 pieces; skeletal muscle with small focus of vessels/fat 8.5 Muscle Muscle - Skeletal 0011907 213 383 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.994301 261898 0.983901 0.995282 0.878275 20570 1 76 0.00226455 283 0 1.0835e+08 0.0158503 1.63674e+06 1.08864e+08 1.30957e+07 20586 5.4032e+07 0 0.105626 0.995282 0.874132 1.0835e+08 0.0027692 2.35262e+07 1.20505e+07 2.37721e+07 298 2.38143e+07 2.25878e+07 0.00251662 2.35792e+07 49.752 0.0150348 0.996263 0 50.2599 GTEX-1H1E6-2226-SM-9MQJX 1 B1 2 pieces; well trimmed 7.3 Nerve Nerve - Tibial 0001323 216 380 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986014 359463 0.969203 0.988191 0.745554 23961 1 76 0.00549449 161 0 7.70011e+07 0.0305173 246551 7.79213e+07 9.22694e+06 23996 3.83078e+07 0 0.223649 0.988191 0.73675 7.70011e+07 0.007009 1.69552e+07 6.97606e+06 1.70479e+07 154 1.70708e+07 1.21294e+07 0.00625007 1.70934e+07 50.0332 0.0031641 0.990368 0 50.1363 GTEX-1H1E6-2326-SM-A9SKN 1 B1 2 pieces; focal intimal thickening, include attachment of fat/fibroconnective tissue/pacinian corpuscle 7.6 Blood Vessel Artery - Tibial 0007610 217 379 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989586 350749 0.976813 0.991178 0.841304 22284 1 76 0.00642243 219 0 1.04542e+08 0.0227462 387855 1.05472e+08 1.89641e+07 22305 5.20396e+07 0 0.135509 0.991178 0.833883 1.04542e+08 0.00796311 2.26379e+07 8.07796e+06 2.28053e+07 246 2.28387e+07 2.07189e+07 0.00719153 2.27639e+07 49.918 0.00367731 0.99277 0 50.1841 GTEX-1H1ZS-0001-SM-EYYVX C1 9.2 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1261 BP-57125 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989 564035 0.967156 0.991921 0.800762 21847 1 76 0.00218868 222 0 1.00145e+08 0.0323287 502137 1.0096e+08 3.55002e+06 21873 4.98196e+07 0 0.166394 0.991921 0.794293 1.00145e+08 0.003468 2.21188e+07 1.44641e+07 2.23393e+07 252 2.24311e+07 2.32525e+07 0.00282646 2.23062e+07 49.8604 0.0049736 0.994842 0 50.2481 GTEX-1H1ZS-0002-SM-AG5YJ C1 Blood Whole Blood 0013756 1261 BP-57156,BP-57157 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/10/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H1ZS-0006-SM-A8N7P C1 8 Blood Whole Blood 0013756 1261 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.945129 444516 0.979548 0.947228 0.807232 19751 1 76 0.0110177 97 0 9.98099e+07 0.0186425 140396 1.05371e+08 1.95827e+07 19757 4.95583e+07 0 0.172316 0.947228 0.764633 9.98099e+07 0.0112445 2.37777e+07 1.90555e+08 2.38129e+07 130 2.38571e+07 2.90895e+07 0.0111309 2.39818e+07 50.1303 0.0013324 0.949327 0 50.0371 GTEX-1H1ZS-0011-R10b-SM-A9SK9 C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 1270 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990072 746336 0.960836 0.99172 0.828661 25594 1 76 0.00641137 272 0 1.10299e+08 0.0387571 3.83846e+06 1.1122e+08 1.90481e+07 25619 5.49055e+07 0 0.132175 0.99172 0.8218 1.10299e+08 0.00783913 2.3937e+07 2.29434e+07 2.43008e+07 316 2.43141e+07 1.33261e+07 0.00712407 2.40725e+07 49.7504 0.0345123 0.993369 0 50.377 GTEX-1H1ZS-0011-R11a-SM-C1YQM C1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 1270 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987625 1.16724e+06 0.944664 0.990481 0.720981 24765 1 76 0.00215266 273 0 1.05676e+08 0.0548334 1.02396e+06 1.06692e+08 4.97113e+06 24812 5.24969e+07 0 0.223683 0.990481 0.714118 1.05676e+08 0.00263403 2.27343e+07 1.4026e+07 2.28522e+07 289 2.30242e+07 1.45783e+07 0.00239265 2.28275e+07 49.7856 0.00959734 0.993337 0 50.1294 GTEX-1H1ZS-0011-R1b-SM-A9G1E C1, A1 7.4 Brain Brain - Hippocampus 0001954 1270 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987821 432007 0.962624 0.992168 0.827565 24546 1 76 0.00399586 270 0 9.25816e+07 0.0370772 3.87336e+06 9.33124e+07 8.80199e+06 24568 4.5994e+07 0 0.135059 0.992168 0.821084 9.25816e+07 0.00402561 2.01438e+07 1.91557e+07 2.03257e+07 284 2.04132e+07 9.72477e+06 0.00401048 2.0392e+07 49.9741 0.0415096 0.996515 0 50.2247 GTEX-1H1ZS-0011-R2b-SM-CL54Q C1, A1 6 Brain Brain - Substantia nigra 0002038 1270 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992341 624337 0.973609 0.994322 0.863132 23934 1 76 0.00255018 380 0 1.31891e+08 0.0261207 9.60368e+06 1.32644e+08 1.68104e+07 23952 6.56692e+07 0 0.110477 0.994322 0.858232 1.31891e+08 0.00425884 2.88461e+07 2.82634e+07 2.97822e+07 429 2.95465e+07 1.63991e+07 0.00340281 2.9292e+07 49.7837 0.072402 0.996304 0 50.7983 GTEX-1H1ZS-0011-R3b-SM-CE6RS C1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1270 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990362 427101 0.968032 0.991688 0.84116 24394 1 76 0.00778354 204 0 8.47621e+07 0.0315435 3.29211e+06 8.54725e+07 1.30908e+07 24418 4.21888e+07 0 0.126872 0.991688 0.834168 8.47621e+07 0.0074232 1.86478e+07 1.33765e+07 1.8886e+07 213 1.89261e+07 1.11382e+07 0.00760361 1.8696e+07 49.6942 0.0385166 0.993013 0 50.3173 GTEX-1H1ZS-0011-R4b-SM-CKZO7 C1, A1 7.2 Brain Brain - Amygdala 0001876 1270 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99151 264569 0.965669 0.993694 0.839353 23460 1 76 0.0021017 159 0 6.78399e+07 0.0340292 3.54953e+06 6.82704e+07 6.64897e+06 23477 3.3782e+07 0 0.126316 0.993694 0.834061 6.78399e+07 0.00347395 1.48462e+07 1.02945e+07 1.51047e+07 202 1.50785e+07 7.80628e+06 0.00278632 1.49965e+07 49.8637 0.0519922 0.995879 0 50.4315 GTEX-1H1ZS-0011-R5b-SM-CL53L C1, A1 8.4 Brain Brain - Caudate (basal ganglia) 0001873 1270 BP-69274 RNA isolation_PAXgene Tissue miRNA 11/20/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993113 737810 0.961624 0.994708 0.812015 25598 1 76 0.00255943 373 0 1.11235e+08 0.0379764 3.92965e+06 1.11826e+08 1.35638e+07 25626 5.53838e+07 0 0.149609 0.994708 0.807718 1.11235e+08 0.00390139 2.41855e+07 2.02098e+07 2.45218e+07 349 2.45292e+07 1.39573e+07 0.00322933 2.43358e+07 49.8021 0.0351407 0.996304 0 50.3452 GTEX-1H1ZS-0011-R6b-SM-A9G1F C1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1270 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984449 431707 0.961524 0.990283 0.822833 25063 1 76 0.00405439 271 0 9.09001e+07 0.0381492 3.30985e+06 9.17921e+07 8.95064e+06 25086 4.50861e+07 0 0.138692 0.990283 0.814837 9.09001e+07 0.00382857 1.9682e+07 1.59795e+07 1.99323e+07 266 2.00571e+07 1.13247e+07 0.00394362 2.00119e+07 49.9436 0.0360581 0.996117 0 50.3159 GTEX-1H1ZS-0011-R7a-SM-CL54P C1, A1 8.3 Brain Brain - Putamen (basal ganglia) 0001874 1270 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.988899 1.09845e+06 0.962278 0.991283 0.840689 23648 1 76 0.00281142 204 0 7.93058e+07 0.0373853 3.07949e+06 8.00031e+07 1.14489e+07 23668 3.93993e+07 0 0.121589 0.991283 0.833361 7.93058e+07 0.00366673 1.71853e+07 1.53663e+07 1.76871e+07 228 1.77172e+07 1.01755e+07 0.00323804 1.73286e+07 49.4455 0.0384921 0.993668 0 50.7195 GTEX-1H1ZS-0011-R8b-SM-A9SKA C1, A1 7 Brain Brain - Hypothalamus 0001898 1270 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990161 503942 0.961229 0.991804 0.827843 23935 1 76 0.00656205 201 0 7.94036e+07 0.0385293 5.12577e+06 8.00597e+07 1.39746e+07 23956 3.95337e+07 0 0.133385 0.991804 0.821058 7.94036e+07 0.00782495 1.71843e+07 2.24155e+07 1.76492e+07 212 1.76126e+07 7.86147e+06 0.00719245 1.73161e+07 49.5757 0.0640243 0.993448 0 50.6673 GTEX-1H1ZS-0011-R9a-SM-CM2SO C1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1270 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993897 663871 0.963082 0.995157 0.822504 24566 1 76 0.00201531 287 0 9.27813e+07 0.0364067 1.21968e+06 9.32328e+07 5.91789e+06 24592 4.62005e+07 0 0.140578 0.995157 0.818521 9.27813e+07 0.00264576 2.06204e+07 1.08279e+07 2.07383e+07 296 2.07311e+07 1.50549e+07 0.00233014 2.07492e+07 50.0219 0.0130821 0.996418 0 50.1425 GTEX-1H1ZS-0126-SM-9YFKQ 1 C1 2 pieces, mainly fibroadipose elements, trace ducts, rep delineated 7.1 Breast Breast - Mammary Tissue 0008367 1344 1272 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.989117 173041 0.975972 0.990608 0.831148 20938 1 76 0.00235052 128 0 5.38512e+07 0.0237465 333516 5.43617e+07 1.85858e+06 20950 2.68282e+07 0 0.144825 0.990608 0.823342 5.38512e+07 0.00364121 1.17195e+07 5.8699e+06 1.18348e+07 133 1.18247e+07 9.97935e+06 0.00299489 1.18103e+07 49.9697 0.00613513 0.9921 0 50.2447 GTEX-1H1ZS-0226-SM-9YFLG 0 C1 2 pieces, trace nubbins of fat up to ~0.3mm 5.8 Nerve Nerve - Tibial 0001323 1346 1271 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992335 301451 0.964702 0.993791 0.734786 24697 1 76 0.00256176 223 0 9.48339e+07 0.0350645 436475 9.54264e+07 3.50385e+06 24744 4.72399e+07 0 0.229916 0.993791 0.730224 9.48339e+07 0.00365288 2.07529e+07 9.83187e+06 2.09593e+07 235 2.096e+07 1.443e+07 0.00310652 2.08871e+07 49.913 0.00457395 0.995247 0 50.2473 GTEX-1H1ZS-0326-SM-9WG6F 0 C1 2 pieces, minimal atherosis, adherent fat; Monckeberg medial sclerosis present, rep focidelineated 6.2 Blood Vessel Artery - Tibial 0007610 1349 1268 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990933 313773 0.968349 0.993252 0.768979 24540 1 76 0.002591 380 0 1.36376e+08 0.0313336 605516 1.37303e+08 1.03971e+07 24592 6.78648e+07 0 0.199369 0.993252 0.76379 1.36376e+08 0.0034902 2.93931e+07 1.17267e+07 2.96999e+07 335 2.97533e+07 2.26572e+07 0.00303955 2.96355e+07 49.9008 0.00441009 0.995572 0 50.2595 GTEX-1H1ZS-0426-SM-9WG6G 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~40 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 1350 1268 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.99081 311085 0.967277 0.993242 0.751023 26311 1 76 0.00256519 391 0 1.37325e+08 0.0325236 889828 1.38259e+08 1.01934e+07 26369 6.8348e+07 0 0.216254 0.993242 0.745948 1.37325e+08 0.00365717 2.99039e+07 1.52053e+07 3.03178e+07 354 3.03378e+07 2.15552e+07 0.00310984 3.01965e+07 49.8833 0.00643595 0.995675 0 50.3436 GTEX-1H1ZS-0526-SM-9WG5L 0 C1 2 pieces, trace fascia/vascular elements, rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1352 1266 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991482 271392 0.973925 0.993963 0.814729 23926 1 76 0.00238587 384 0 1.18344e+08 0.0258211 639252 1.19062e+08 8.19787e+06 23959 5.89093e+07 0 0.159197 0.993963 0.80981 1.18344e+08 0.00351368 2.57308e+07 1.26007e+07 2.5946e+07 342 2.59761e+07 2.05115e+07 0.00294837 2.59755e+07 49.9994 0.00536905 0.996444 0 50.2083 GTEX-1H1ZS-0626-SM-CNPPU 0 C1 2 pieces, ~10% interstitial fat/vascular elements; rep delineated. Mild chronic myositis 8.6 Muscle Muscle - Skeletal 0011907 1354 1265 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986268 481354 0.982106 0.989325 0.860181 22467 1 76 0.00541902 291 0 1.32647e+08 0.0176226 1.04166e+06 1.34079e+08 3.47649e+07 22484 6.59731e+07 0 0.121925 0.989325 0.850999 1.32647e+08 0.00843519 2.8994e+07 1.99324e+07 2.92964e+07 316 2.94136e+07 2.75012e+07 0.00692244 2.92406e+07 49.8525 0.00776902 0.992382 0 50.2594 GTEX-1H1ZS-0726-SM-A9G3K 1 C1 2 pieces. Nodular goiter; lymphocytic/Hashimoto thyroiditis, lymphoid aggregates delineated 6.7 Thyroid Thyroid 0002046 1356 1263 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985043 195363 0.966568 0.989918 0.739083 24390 1 76 0.00414793 127 0 6.86517e+07 0.033173 170658 6.93509e+07 6.67777e+06 24424 3.40669e+07 0 0.227486 0.989918 0.731632 6.86517e+07 0.00415197 1.48877e+07 8.07968e+06 1.51406e+07 134 1.52456e+07 1.09989e+07 0.00414992 1.50923e+07 49.7475 0.00246079 0.994793 0 50.4211 GTEX-1H1ZS-0826-SM-A9SMD 1 C1 2 pieces chronic fibrosing pneumonitis; edema 6.5 Lung Lung 0008952 1358 1262 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988682 235428 0.973347 0.990287 0.7824 23785 1 76 0.00681829 112 0 6.06478e+07 0.0264258 265695 6.12426e+07 1.13247e+07 23805 3.01813e+07 0 0.190947 0.990287 0.7748 6.06478e+07 0.00826435 1.33543e+07 7.73922e+06 1.34983e+07 116 1.34997e+07 1.01607e+07 0.00754015 1.34496e+07 49.907 0.0043384 0.991892 0 50.268 GTEX-1H1ZS-0926-SM-ADEIT 1 C1 2 pieces, no adherent fat or significant atherosis 6.1 Blood Vessel Artery - Coronary 0001621 1361 1259 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980554 219788 0.97419 0.986966 0.836181 21223 1 76 0.00337825 147 0 7.10255e+07 0.0254854 260688 7.19634e+07 8.12966e+06 21241 3.51824e+07 0 0.138009 0.986966 0.825282 7.10255e+07 0.00317652 1.51217e+07 6.03019e+06 1.53259e+07 163 1.54345e+07 1.39883e+07 0.00327804 1.54257e+07 49.9858 0.00362251 0.993378 0 50.3353 GTEX-1H1ZS-1026-SM-9WG6E 1 C1 2 pieces, no abnormalites 6.5 Heart Heart - Atrial Appendage 0006631 1364 1257 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.99296 138821 0.979749 0.995219 0.850547 22217 1 76 0.00232766 270 0 9.08417e+07 0.0199315 1.47536e+06 9.12781e+07 6.40681e+06 22234 4.52426e+07 0 0.129202 0.995219 0.84648 9.08417e+07 0.00319133 1.95178e+07 1.09329e+07 1.94986e+07 273 1.95621e+07 1.4982e+07 0.00275851 1.96287e+07 50.085 0.0161633 0.997477 0 49.9754 GTEX-1H1ZS-1126-SM-9MQLJ 1 C1 2 pieces, moderate chronic ischemic change/interstitial fibrosis 6.6 Heart Heart - Left Ventricle 0006566 1365 1257 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.986478 205654 0.982213 0.988788 0.847121 20706 1 76 0.00586905 191 0 8.10282e+07 0.017694 2.78057e+06 8.1947e+07 9.61353e+06 20716 4.03316e+07 0 0.135092 0.988788 0.837623 8.10282e+07 0.0074574 1.74812e+07 1.74664e+07 1.85355e+07 239 1.84748e+07 6.71081e+06 0.00666137 1.76625e+07 48.876 0.0339313 0.991098 0 51.4636 GTEX-1H1ZS-1226-SM-9WYTV 1 C1 6 pieces, atherosis up to ~0.8mm, focally calcified, delineated 6.4 Blood Vessel Artery - Aorta 0001496 1366 1256 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.991662 233682 0.971892 0.993586 0.787853 23605 1 76 0.00296085 380 0 1.26734e+08 0.0277935 359947 1.27552e+08 1.49834e+07 23643 6.30698e+07 0 0.184039 0.993586 0.7828 1.26734e+08 0.00443272 2.72836e+07 1.3014e+07 2.74563e+07 363 2.74018e+07 2.22289e+07 0.00369536 2.75783e+07 50.1606 0.00282197 0.99551 0 50.1578 GTEX-1H1ZS-1326-SM-9WG74 1 C1 2 pieces, trace fascia 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1375 1248 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990435 257187 0.975574 0.99328 0.818471 24096 1 76 0.00248008 280 0 9.97713e+07 0.0241441 279936 1.00446e+08 7.39109e+06 24118 4.96388e+07 0 0.157103 0.99328 0.812971 9.97713e+07 0.0033638 2.17788e+07 1.06876e+07 2.20088e+07 282 2.20653e+07 1.95678e+07 0.00292068 2.19981e+07 49.9238 0.00278692 0.996126 0 50.2626 GTEX-1H1ZS-1526-SM-9OSXR 1 C1 6 pieces squamous mucosa up to ~0.5mm, ~40-50% thickness 7.3 Esophagus Esophagus - Mucosa 0006920 1377 1247 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.990156 316201 0.967908 0.992851 0.761185 24034 1 76 0.0026179 205 0 9.38584e+07 0.0319307 602539 9.45342e+07 9.5421e+06 24073 4.66967e+07 0 0.206724 0.992851 0.755743 9.38584e+07 0.00391836 2.08184e+07 1.21236e+07 2.10433e+07 243 2.11223e+07 1.43051e+07 0.00326637 2.09849e+07 49.8368 0.00637377 0.995546 0 50.2686 GTEX-1H1ZS-1626-SM-9KNU7 1 C1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 1378 1247 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993352 228157 0.974029 0.994351 0.835041 22705 1 76 0.00255422 277 0 9.54458e+07 0.0257414 843882 9.59881e+07 1.06874e+07 22724 4.75718e+07 0 0.138988 0.994351 0.830323 9.54458e+07 0.00330202 2.02393e+07 9.49449e+06 2.05699e+07 274 2.05237e+07 1.71676e+07 0.00292774 2.03811e+07 49.8257 0.00879153 0.99535 0 50.4051 GTEX-1H1ZS-1726-SM-9WYUC 1 C1 6 pieces, confirmed target muscularis 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 1380 1245 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992248 163177 0.971461 0.993865 0.80921 22472 1 76 0.00251729 198 0 8.35764e+07 0.0283489 1.08253e+06 8.40923e+07 6.0903e+06 22495 4.16244e+07 0 0.162252 0.993865 0.804245 8.35764e+07 0.00432963 1.79165e+07 7.15819e+06 1.81505e+07 209 1.81031e+07 1.34397e+07 0.00342199 1.80948e+07 49.9885 0.0128732 0.995481 0 50.3244 GTEX-1H1ZS-2626-SM-9QEIX 1 C1 6 pieces, confirmed target muscularis 7.5 Colon Colon - Sigmoid 0001159 1398 1232 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.98993 215089 0.970861 0.992818 0.789185 22419 1 76 0.00189585 141 0 7.0893e+07 0.028924 409462 7.14058e+07 3.7128e+06 22442 3.52659e+07 0 0.181676 0.992818 0.783517 7.0893e+07 0.00410604 1.52756e+07 6.53385e+06 1.54215e+07 161 1.54675e+07 1.2003e+07 0.00299773 1.54167e+07 49.9177 0.0057343 0.995706 0 50.2378 GTEX-1H1ZS-2726-SM-9WG75 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~30-40 microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1399 1231 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992017 143221 0.969708 0.99382 0.810105 23705 1 76 0.00254646 175 0 7.50407e+07 0.0301023 480221 7.55074e+07 5.58529e+06 23729 3.73607e+07 0 0.159603 0.99382 0.805098 7.50407e+07 0.00350581 1.63899e+07 8.396e+06 1.65758e+07 188 1.65191e+07 1.23305e+07 0.00302526 1.6583e+07 50.0965 0.00635992 0.995623 0 50.282 GTEX-1H1ZS-2826-SM-9OSXS 1 C1 2 pieces, spermatogenesis appears reduced 6.9 Testis Testis 0000473 1401 1230 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.989998 394549 0.93845 0.992249 0.719472 33752 1 76 0.0027439 278 0 1.06288e+08 0.0613023 2.23379e+06 1.07118e+08 1.05746e+07 33827 5.28953e+07 0 0.218979 0.992249 0.713895 1.06288e+08 0.00360375 2.26452e+07 1.48092e+07 2.28211e+07 265 2.29073e+07 1.46128e+07 0.00317285 2.27716e+07 49.8514 0.0208535 0.9945 0 50.1934 GTEX-1H1ZS-2926-SM-9WPP2 1 C1 4 pieces, no abnormalities 7.2 Brain Brain - Cerebellum 0002037 1403 1229 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986984 372330 0.944954 0.988653 0.726072 24181 1 76 0.00660354 129 0 7.21113e+07 0.0547273 1.01792e+06 7.29389e+07 1.11638e+07 24214 3.58773e+07 0 0.218883 0.988653 0.717833 7.21113e+07 0.00688595 1.55436e+07 1.2266e+07 1.56371e+07 141 1.56687e+07 9.01114e+06 0.00674451 1.56204e+07 49.9227 0.0139558 0.990323 0 50.15 GTEX-1H1ZS-3026-SM-9KNUJ 1 C1 4 pieces, no abnormalities 7.2 Brain Brain - Cortex 0001870 1405 1227 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.9941 303548 0.964003 0.995135 0.809393 25432 1 76 0.00268979 272 0 9.96675e+07 0.0355711 2.64935e+06 1.00155e+08 1.20057e+07 25461 4.96785e+07 0 0.15461 0.995135 0.805455 9.96675e+07 0.00333144 2.18346e+07 1.5223e+07 2.20766e+07 283 2.20027e+07 1.30743e+07 0.00301028 2.19934e+07 49.9893 0.0264525 0.99617 0 50.2755 GTEX-1H23P-0002-SM-AG5YQ C1 Blood Whole Blood 0013756 501 BP-57156,BP-57157 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/10/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H23P-0005-SM-A9G14 C1 7.8 Blood Whole Blood 0013756 501 BP-57161 RNA isolation_PAXgene Blood RNA (Manual) 10/10/2014 LCSET-7846,LCSET-8170 11/17/2015 TruSeq.v1 RNASEQ 0.950093 638526 0.975297 0.954842 0.79664 17736 1 76 0.00177714 113 0 1.06002e+08 0.0238427 183744 1.11015e+08 6.15143e+06 17739 5.26136e+07 0 0.178657 0.954842 0.760666 1.06002e+08 0.00317912 2.49359e+07 1.97952e+08 2.50965e+07 161 2.53012e+07 2.94002e+07 0.00247462 2.52602e+07 49.9594 0.00165512 0.959592 0 50.1605 GTEX-1H23P-0011-R10a-SM-A96RS C1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 500 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993489 293906 0.96951 0.994788 0.843482 23356 1 76 0.00171176 267 0 8.90969e+07 0.0302413 4.54638e+06 8.95637e+07 2.74124e+06 23374 4.44165e+07 0 0.126029 0.994788 0.839085 8.90969e+07 0.00213028 1.95414e+07 1.62522e+07 1.97508e+07 314 1.9595e+07 8.6533e+06 0.00192074 1.97915e+07 50.2494 0.0507614 0.996086 0 50.2665 GTEX-1H23P-0011-R1a-SM-ACKVC C1, A1 6.7 Brain Brain - Hippocampus 0001954 500 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992898 535199 0.958345 0.99442 0.809933 22954 1 76 0.00262165 278 0 1.00322e+08 0.0414655 5.91069e+06 1.00885e+08 1.31611e+07 22980 4.99838e+07 0 0.148413 0.99442 0.805414 1.00322e+08 0.00342415 2.17197e+07 2.72874e+07 2.23152e+07 328 2.20498e+07 9.25738e+06 0.00302229 2.21141e+07 50.0728 0.0585887 0.995942 0 50.6762 GTEX-1H23P-0011-R2a-SM-CKZP3 C1, A1 5.6 Brain Brain - Substantia nigra 0002038 500 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991388 289565 0.979266 0.99376 0.851089 20401 1 76 0.00177785 372 0 9.19028e+07 0.0206017 1.06489e+07 9.24799e+07 8.51566e+06 20413 4.57707e+07 0 0.128177 0.99376 0.845778 9.19028e+07 0.0031389 1.95311e+07 3.37275e+07 2.08599e+07 359 2.03324e+07 6.17749e+06 0.00245675 2.01689e+07 49.7982 0.115148 0.996132 0 51.6449 GTEX-1H23P-0011-R3b-SM-CL54S C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 500 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990821 1.00202e+06 0.970067 0.993248 0.861031 23090 1 76 0.00234834 369 0 1.13281e+08 0.0296321 8.83605e+06 1.14051e+08 1.40635e+07 23106 5.63482e+07 0 0.109035 0.993248 0.855217 1.13281e+08 0.00418175 2.45997e+07 2.91922e+07 2.53986e+07 436 2.5293e+07 1.12793e+07 0.0032628 2.49329e+07 49.6415 0.0774748 0.995674 0 50.7989 GTEX-1H23P-0011-R4b-SM-CL54R C1, A1 7.4 Brain Brain - Amygdala 0001876 500 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992325 553982 0.966773 0.994267 0.854428 21664 1 76 0.00246213 372 0 8.29494e+07 0.0330348 7.93226e+06 8.34276e+07 1.07913e+07 21681 4.1301e+07 0 0.112345 0.994267 0.84953 8.29494e+07 0.00386579 1.7817e+07 2.20088e+07 1.89109e+07 355 1.85942e+07 6.88919e+06 0.00316259 1.82547e+07 49.5394 0.0950795 0.99621 0 51.4892 GTEX-1H23P-0011-R5a-SM-CKZOI C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 500 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99133 710314 0.963642 0.993872 0.826605 23051 1 76 0.00188155 266 0 8.29554e+07 0.0361193 4.99414e+06 8.34669e+07 8.11254e+06 23076 4.12861e+07 0 0.137038 0.993872 0.821539 8.29554e+07 0.0033166 1.7965e+07 2.31138e+07 1.83228e+07 323 1.83071e+07 8.02621e+06 0.00259724 1.81607e+07 49.7992 0.0598338 0.996414 0 50.4929 GTEX-1H23P-0011-R6b-SM-A9G1H C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 500 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985638 591283 0.96073 0.990962 0.820495 22151 1 76 0.00376768 267 0 8.93818e+07 0.0391224 8.43755e+06 9.0197e+07 8.632e+06 22164 4.43827e+07 0 0.140235 0.990962 0.813079 8.93818e+07 0.00382089 1.90226e+07 4.52967e+07 1.95665e+07 310 1.94218e+07 5.98211e+06 0.0037938 1.95255e+07 50.1331 0.0935458 0.996285 0 50.7048 GTEX-1H23P-0011-R7b-SM-CKZP2 C1, A1 7.1 Brain Brain - Putamen (basal ganglia) 0001874 500 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991553 797766 0.961302 0.994094 0.828922 23232 1 76 0.00186447 372 0 1.01285e+08 0.0384711 6.28312e+06 1.01887e+08 9.98787e+06 23255 5.04256e+07 0 0.13238 0.994094 0.824027 1.01285e+08 0.00342598 2.18279e+07 3.27882e+07 2.24705e+07 342 2.23194e+07 9.79339e+06 0.00264323 2.21819e+07 49.8455 0.0616676 0.996636 0 50.7253 GTEX-1H23P-0011-R8b-SM-A9G1G C1, A1 5.7 Brain Brain - Hypothalamus 0001898 500 BP-65126 RNA isolation_PAXgene Tissue miRNA 07/07/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988782 345318 0.968054 0.992949 0.840589 21410 1 76 0.00379927 267 0 7.85328e+07 0.0318432 8.15836e+06 7.90905e+07 7.32153e+06 21421 3.90412e+07 0 0.127465 0.992949 0.834661 7.85328e+07 0.00371525 1.68888e+07 3.02766e+07 1.74898e+07 300 1.72571e+07 4.60412e+06 0.00375798 1.73476e+07 50.1308 0.103152 0.997115 0 50.8741 GTEX-1H23P-0011-R9a-SM-CM2T1 C1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 500 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993988 374666 0.965628 0.995403 0.831654 23115 1 76 0.00181125 382 0 1.00055e+08 0.0341462 4.77428e+06 1.00517e+08 6.04896e+06 23139 4.9852e+07 0 0.133974 0.995403 0.827831 1.00055e+08 0.00267658 2.2184e+07 1.41381e+07 2.24693e+07 370 2.23335e+07 1.09727e+07 0.0022433 2.24417e+07 50.1208 0.0474974 0.996818 0 50.3195 GTEX-1H23P-0126-SM-ADEJ3 1 C1 6 pieces; well trimmed; 5% dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 502 1055 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982315 284428 0.971738 0.988838 0.761441 24112 1 76 0.00314105 234 0 8.6413e+07 0.0280477 785846 8.73884e+07 8.09664e+06 24154 4.28198e+07 0 0.210297 0.988838 0.752941 8.6413e+07 0.00344806 1.88002e+07 8.55604e+06 1.89879e+07 212 1.92007e+07 1.4092e+07 0.00329354 1.90877e+07 49.8525 0.00899256 0.995361 0 50.2483 GTEX-1H23P-0226-SM-9YFLO 1 C1 2 pieces: 1 with large blood vessel and fibrous tissue comprising 10% 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 503 1054 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993192 184192 0.978607 0.994829 0.823122 21160 1 76 0.00229465 138 0 6.37977e+07 0.0211586 483376 6.41293e+07 2.26265e+06 21174 3.17887e+07 0 0.155484 0.994829 0.818866 6.37977e+07 0.00359408 1.39997e+07 7.22838e+06 1.41361e+07 152 1.41425e+07 1.16636e+07 0.0029433 1.40937e+07 49.9136 0.00753752 0.996466 0 50.2424 GTEX-1H23P-0326-SM-9MQKH 1 C1 2 pieces; 20% internal & external fat content 6.5 Nerve Nerve - Tibial 0001323 505 1053 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984422 278325 0.97046 0.986765 0.726766 22944 1 76 0.00577055 132 0 6.46838e+07 0.0293346 228595 6.55514e+07 8.33157e+06 22981 3.21734e+07 0 0.243694 0.986765 0.717147 6.46838e+07 0.00719424 1.41843e+07 6.51911e+06 1.4327e+07 131 1.43451e+07 9.54826e+06 0.0064807 1.43118e+07 49.9419 0.00348727 0.989109 0 50.2503 GTEX-1H23P-0426-SM-9YFKR 1 C1 2 pieces; extensive [25%] medial calcification; moderate atheromatous plaque 5.7 Blood Vessel Artery - Tibial 0007610 508 1051 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992712 170628 0.974114 0.994151 0.837634 21010 1 76 0.00242471 145 0 6.4559e+07 0.0256328 231660 6.49388e+07 2.51262e+06 21023 3.21522e+07 0 0.13648 0.994151 0.832735 6.4559e+07 0.00361346 1.39099e+07 5.84431e+06 1.4048e+07 163 1.39975e+07 1.17262e+07 0.00301822 1.40596e+07 50.1106 0.00356736 0.99559 0 50.2471 GTEX-1H23P-0526-SM-9WG6S 1 C1 2 pieces; moderate atrophy; 10% internal fat 7.1 Muscle Muscle - Skeletal 0011907 510 1049 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991962 168759 0.978838 0.994099 0.840953 20551 1 76 0.0022584 280 0 9.13571e+07 0.0209935 1.63815e+06 9.18994e+07 6.86172e+06 20565 4.55078e+07 0 0.137885 0.994099 0.835991 9.13571e+07 0.0030733 2.01783e+07 1.09616e+07 2.03631e+07 292 2.03095e+07 1.48889e+07 0.00266497 2.03987e+07 50.1095 0.0178255 0.996236 0 50.2279 GTEX-1H23P-0626-SM-9WG6T 1 C1 6 pieces; well trimmed; 5% dermall fat 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 512 1048 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.989832 182593 0.973322 0.992076 0.709944 23313 1 76 0.00260714 148 0 7.07131e+07 0.0265119 855745 7.12779e+07 5.11811e+06 23347 3.51962e+07 0 0.263378 0.992076 0.704319 7.07131e+07 0.00363545 1.56521e+07 7.2075e+06 1.58381e+07 152 1.58539e+07 9.71936e+06 0.00312013 1.57889e+07 49.8973 0.0120058 0.99432 0 50.2953 GTEX-1H23P-0726-SM-9WG7K 1 C1 2 pieces; ducts & fibrous tissue (gynecomastoid changes) 6.1 Breast Breast - Mammary Tissue 0008367 513 1048 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.99091 197461 0.980029 0.99363 0.820805 22373 1 76 0.00246331 274 0 9.59673e+07 0.0197232 869361 9.65825e+07 7.48867e+06 22402 4.77568e+07 0 0.159224 0.99363 0.815577 9.59673e+07 0.00343786 2.11058e+07 1.03751e+07 2.1417e+07 302 2.14726e+07 1.56014e+07 0.00294925 2.12938e+07 49.791 0.00900123 0.996351 0 50.366 GTEX-1H23P-0826-SM-9WYU4 1 C1 2 pieces; no spermatogenesis; severe tubular fibrosis & hyalization 6.1 Testis Testis 0000473 514 1047 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 EXCLUDE 0.992154 203179 0.976214 0.993778 0.736752 23930 1 76 0.00272717 165 0 8.57617e+07 0.0235392 1.44409e+06 8.62986e+07 6.0401e+06 23979 4.26869e+07 0 0.239462 0.993778 0.732168 8.57617e+07 0.00453202 1.91006e+07 8.91704e+06 1.92935e+07 197 1.93119e+07 1.21693e+07 0.00362812 1.92191e+07 49.8796 0.0167337 0.995402 0 50.2512 GTEX-1H23P-1026-SM-9QEHQ 1 C1 2 pieces; bone marrow embolus [0.8mm]; mild emphysema 6.5 Lung Lung 0008952 518 1045 BP-59808 RNA Extraction from Paxgene-derived Lysate Plate Based 01/21/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990121 271805 0.973484 0.992765 0.73868 24314 1 76 0.00196338 204 0 9.29858e+07 0.0262818 414966 9.36634e+07 4.56497e+06 24356 4.62555e+07 0 0.234804 0.992765 0.733336 9.29858e+07 0.00394227 2.0521e+07 8.78445e+06 2.06217e+07 235 2.07037e+07 1.38779e+07 0.00295019 2.06642e+07 49.9523 0.0044304 0.99541 0 50.1224 GTEX-1H23P-1226-SM-9QEJ2 1 C1 2 pieces; scattered interstitial fibrous scars comprise <10% 6.7 Heart Heart - Left Ventricle 0006566 525 1038 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.992054 128945 0.981245 0.994803 0.845877 20120 1 76 0.00158056 193 0 6.76017e+07 0.0186619 2.9531e+06 6.79548e+07 3.32775e+06 20128 3.36601e+07 0 0.135368 0.994803 0.841481 6.76017e+07 0.00350391 1.50697e+07 1.21983e+07 1.51186e+07 247 1.51941e+07 6.72215e+06 0.00253958 1.51396e+07 49.9101 0.0434568 0.997553 0 50.081 GTEX-1H23P-1426-SM-9JGH5 0 C1 6 pieces; well dissected, well preserved 9 Esophagus Esophagus - Mucosa 0006920 527 1038 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993424 470880 0.972231 0.99458 0.76522 23709 1 76 0.00201154 376 0 1.36044e+08 0.0275443 528786 1.36785e+08 6.96831e+06 23746 6.78254e+07 0 0.207011 0.99458 0.761072 1.36044e+08 0.00287038 3.04591e+07 1.84158e+07 3.07476e+07 356 3.07261e+07 2.26952e+07 0.00244046 3.06314e+07 49.9228 0.00386581 0.995737 0 50.2357 GTEX-1H23P-1526-SM-9WG7I 1 C1 6 pieces; well dissected muscularis 7 Esophagus Esophagus - Muscularis 0004648 528 1037 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990602 152699 0.970873 0.993502 0.775056 23690 1 76 0.00252954 271 0 9.63586e+07 0.0289389 1.00575e+06 9.69888e+07 7.43322e+06 23731 4.7937e+07 0 0.195817 0.993502 0.77002 9.63586e+07 0.00341189 2.08205e+07 8.3716e+06 2.10873e+07 287 2.11268e+07 1.39468e+07 0.00296942 2.10417e+07 49.8991 0.0103697 0.996402 0 50.3183 GTEX-1H23P-1726-SM-A9SMN 1 C1 2 pieces: 10% fibrovascular content in 1; <5% in other 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 530 1036 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8171 11/17/2015 TruSeq.v1 RNASEQ 0.987473 487467 0.97862 0.991529 0.788697 23812 1 76 0.00322709 275 0 1.06584e+08 0.021157 484230 1.07494e+08 9.88372e+06 23840 5.29454e+07 0 0.189923 0.991529 0.782016 1.06584e+08 0.00424495 2.34018e+07 1.01542e+07 2.35286e+07 298 2.36764e+07 1.81798e+07 0.00373394 2.3652e+07 49.9742 0.00450471 0.995585 0 50.135 GTEX-1H23P-1826-SM-A8NA5 1 C1 2 pieces: 10% vascular content in 1; not congested 5.7 Liver Liver 0001114 532 1035 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985785 279555 0.978164 0.988577 0.817669 22361 1 76 0.0104882 159 0 8.64359e+07 0.0217148 3.06037e+06 8.74347e+07 1.51308e+07 22379 4.29598e+07 0 0.160495 0.988577 0.808328 8.64359e+07 0.0111204 1.87946e+07 1.53408e+07 1.9324e+07 197 1.92812e+07 1.21705e+07 0.0108034 1.90416e+07 49.6873 0.0350018 0.991368 0 50.6944 GTEX-1H23P-2026-SM-9OSXY 2 C1 2 pieces; PanIN 1A change 6.8 Pancreas Pancreas 0001150 536 1032 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7198 06/02/2015 TruSeq.v1 RNASEQ 0.991315 280226 0.968223 0.993478 0.775018 22892 1 76 0.00281447 136 0 9.22544e+07 0.0315512 501596 9.286e+07 8.63403e+06 22925 4.59134e+07 0 0.193205 0.993478 0.769963 9.22544e+07 0.00395536 2.06954e+07 1.89237e+07 2.1034e+07 161 2.10178e+07 1.978e+07 0.00338367 2.09131e+07 49.8752 0.00540164 0.995641 0 50.4057 GTEX-1H23P-2626-SM-9KNVN 1 C1 6 pieces; well dissected muscle with variable amounts of submucosa 5.7 Colon Colon - Sigmoid 0001159 547 1024 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.99346 166897 0.968991 0.994606 0.773763 24832 1 76 0.00248492 271 0 9.83295e+07 0.0308253 1.05881e+06 9.88628e+07 9.80441e+06 24877 4.90086e+07 0 0.195227 0.994606 0.76959 9.83295e+07 0.00358872 2.13261e+07 8.97485e+06 2.15387e+07 287 2.15004e+07 1.31676e+07 0.00303618 2.14712e+07 49.966 0.0107099 0.995751 0 50.248 GTEX-1H23P-2726-SM-9JGHN 2 C1 6 pieces; mucosa largely autolyzed, muscle moderately autolyzed 6.4 Stomach Stomach 0000945 548 1024 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.990181 293547 0.976356 0.991569 0.80004 24840 1 76 0.00189725 405 0 1.14896e+08 0.0234549 1.41603e+06 1.15873e+08 5.31879e+06 24885 5.72646e+07 0 0.176316 0.991569 0.793295 1.14896e+08 0.00300107 2.59582e+07 4.94019e+07 2.62727e+07 342 2.62934e+07 2.29802e+07 0.00244838 2.60889e+07 49.8047 0.0122205 0.992957 0 50.3011 GTEX-1H23P-2926-SM-9WYU8 1 C1 4 pieces 6.6 Brain Brain - Cortex 0001870 563 1010 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993449 327516 0.966659 0.9952 0.83268 23568 1 76 0.00226194 267 0 9.10682e+07 0.0330804 4.31732e+06 9.15074e+07 6.21039e+06 23588 4.53721e+07 0 0.133979 0.9952 0.828683 9.10682e+07 0.00431038 1.9863e+07 2.05854e+07 2.02259e+07 326 2.00938e+07 9.32492e+06 0.00328436 2.01123e+07 50.0231 0.04718 0.996951 0 50.4525 GTEX-1H23P-3026-SM-9JGH7 1 C1 1 piece; posterior lobe comprises 20% [labeled] 6.4 Pituitary Pituitary 0000007 563 1010 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.991088 132578 0.962035 0.992763 0.758167 24101 1 76 0.00406059 109 0 5.44749e+07 0.0378114 1.10752e+06 5.4872e+07 6.26575e+06 24128 2.71324e+07 0 0.203869 0.992763 0.75268 5.44749e+07 0.00414983 1.17497e+07 6.40398e+06 1.21651e+07 129 1.21405e+07 6.02168e+06 0.00410514 1.1858e+07 49.4114 0.0201838 0.994437 0 50.8685 GTEX-1H2FU-0001-SM-AG5YK C1 Blood Whole Blood 0013756 782 BP-57280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/17/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H2FU-0004-SM-EYYW8 C1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 782 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984429 967710 0.971174 0.989272 0.829334 21682 1 76 0.00213674 282 0 1.14424e+08 0.0283125 480271 1.15665e+08 4.22425e+06 21711 5.67742e+07 0 0.14184 0.989272 0.820437 1.14424e+08 0.0036685 2.53329e+07 1.66412e+07 2.55793e+07 290 2.57952e+07 2.78892e+07 0.00289887 2.56474e+07 49.8564 0.00415227 0.994115 0 50.242 GTEX-1H2FU-0005-SM-A8N7R C1 5.7 Blood Whole Blood 0013756 782 BP-57278 RNA isolation_PAXgene Blood RNA (Manual) 10/17/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.974747 1.6258e+06 0.927566 0.977269 0.710155 21466 1 76 0.0112912 129 0 9.21661e+07 0.0712876 484460 9.43099e+07 1.76429e+07 21480 4.57498e+07 0 0.217411 0.977269 0.694012 9.21661e+07 0.0116463 1.99019e+07 1.27641e+08 2.02705e+07 135 2.03018e+07 1.7092e+07 0.0114683 2.01637e+07 49.8294 0.00513689 0.97979 0 50.4588 GTEX-1H2FU-0011-R11a-SM-CE6SB C1, A1 6.4 Brain Brain - Cerebellar Hemisphere 0002037 791 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.987518 655750 0.945283 0.988934 0.731008 23051 1 76 0.00821812 159 0 8.58786e+07 0.0543952 1.94614e+06 8.68395e+07 1.42214e+07 23079 4.26831e+07 0 0.214275 0.988934 0.722918 8.58786e+07 0.0073298 1.85607e+07 1.36522e+07 1.87043e+07 177 1.87995e+07 9.48553e+06 0.0077746 1.85722e+07 49.6959 0.0224108 0.99035 0 50.1926 GTEX-1H2FU-0011-R3b-SM-CKZP4 C1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 791 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990666 595564 0.966638 0.993388 0.859042 21289 1 76 0.00222257 367 0 8.29113e+07 0.0332009 1.18977e+07 8.34632e+07 7.98742e+06 21300 4.12598e+07 0 0.107596 0.993388 0.853362 8.29113e+07 0.0039216 1.80864e+07 2.82924e+07 1.87821e+07 360 1.87106e+07 5.85002e+06 0.00306976 1.8336e+07 49.4945 0.142551 0.99611 0 50.9435 GTEX-1H2FU-0011-R4a-SM-CL551 C1, A1 6.1 Brain Brain - Amygdala 0001876 791 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992041 1.00016e+06 0.956392 0.994252 0.838712 21748 1 76 0.00273117 368 0 1.0934e+08 0.0434924 1.74201e+07 1.09972e+08 1.37242e+07 21760 5.4441e+07 0 0.11768 0.994252 0.833891 1.0934e+08 0.00452994 2.32857e+07 5.2172e+07 2.47316e+07 411 2.43745e+07 6.96447e+06 0.00362856 2.3823e+07 49.4279 0.158405 0.996464 0 51.5056 GTEX-1H2FU-0011-R5b-SM-CL552 C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 791 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992172 1.16455e+06 0.959424 0.994169 0.822859 24118 1 76 0.00259973 371 0 1.18386e+08 0.0402883 9.0529e+06 1.1908e+08 1.53611e+07 24148 5.89315e+07 0 0.136565 0.994169 0.818061 1.18386e+08 0.00388748 2.55353e+07 3.95635e+07 2.64968e+07 390 2.64489e+07 1.38528e+07 0.00324231 2.5799e+07 49.378 0.0760235 0.996165 0 50.924 GTEX-1H2FU-0011-R9b-SM-CE6S4 C1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 791 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989371 709510 0.959925 0.990556 0.812846 24248 1 76 0.00796558 213 0 1.01482e+08 0.0397683 5.25622e+06 1.02449e+08 1.61344e+07 24275 5.04896e+07 0 0.147079 0.990556 0.80517 1.01482e+08 0.00748875 2.23694e+07 1.80224e+07 2.28339e+07 237 2.27163e+07 1.42991e+07 0.00772745 2.26095e+07 49.8823 0.0513055 0.991742 0 50.5138 GTEX-1H2FU-0126-SM-9WYSI 1 C1 6 pieces; include up to 10% mostly periadnexal fat, epidermis measures 36 microns 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 884 911 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993804 233123 0.97529 0.995087 0.810713 23838 1 76 0.00242649 238 0 9.16039e+07 0.024483 788522 9.20562e+07 6.26995e+06 23860 4.56446e+07 0 0.164577 0.995087 0.80673 9.16039e+07 0.00434844 2.00966e+07 8.76327e+06 2.02837e+07 252 2.0245e+07 1.49971e+07 0.00338623 2.02478e+07 50.0035 0.00856566 0.99637 0 50.2317 GTEX-1H2FU-0226-SM-9YFKO 1 C1 2 pieces; dystrophic calcification within fibrous component 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 885 911 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7768 08/26/2015 TruSeq.v1 RNASEQ 0.98968 349793 0.973871 0.99227 0.792951 25666 1 76 0.00247549 382 0 1.6267e+08 0.0258721 1.69174e+06 1.63938e+08 1.38315e+07 25723 8.09507e+07 0 0.18092 0.99227 0.786821 1.6267e+08 0.00334254 3.56272e+07 1.68097e+07 3.59116e+07 426 3.59338e+07 2.57791e+07 0.00290789 3.60110e+07 50.0537 0.0103194 0.99486 0 50.1988 GTEX-1H2FU-0326-SM-9WYSV 1 C1 2 pieces; well trimmed 7 Nerve Nerve - Tibial 0001323 892 904 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991734 278267 0.966061 0.9935 0.722913 24397 1 76 0.00260511 250 0 9.63391e+07 0.0336676 335072 9.69694e+07 6.79625e+06 24441 4.79621e+07 0 0.243147 0.9935 0.718214 9.63391e+07 0.0045434 2.11692e+07 9.65253e+06 2.13371e+07 237 2.1367e+07 1.47379e+07 0.00357253 2.13013e+07 49.923 0.00345544 0.995265 0 50.1975 GTEX-1H2FU-0526-SM-ACKXO 1 C1 2 pieces; include from 10-20% internal fat and vessels, some atrophic fibers 7.5 Muscle Muscle - Skeletal 0011907 899 898 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992975 363640 0.976371 0.994552 0.828386 23387 1 76 0.00258144 301 0 1.30513e+08 0.0233208 2.51102e+06 1.31228e+08 1.7923e+07 23411 6.50197e+07 0 0.147985 0.994552 0.823872 1.30513e+08 0.00341433 2.85198e+07 1.5859e+07 2.86947e+07 326 2.87587e+07 2.45338e+07 0.00299722 2.86451e+07 49.9011 0.0191348 0.996128 0 50.1529 GTEX-1H2FU-0626-SM-9WPPS 2 C1 2 pieces; nodular hyperplasia with regressive changes, adenomatoid nodules, attachment of skeletal muscle on one piece 5.6 Thyroid Thyroid 0002046 904 893 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987763 172160 0.96176 0.989457 0.748829 24334 1 76 0.00645606 138 0 7.68331e+07 0.0380201 1.78454e+06 7.76518e+07 1.19217e+07 24361 3.82555e+07 0 0.212931 0.989457 0.740934 7.68331e+07 0.00705682 1.67185e+07 9.81871e+06 1.69094e+07 149 1.69082e+07 1.12229e+07 0.00675592 1.68416e+07 49.9013 0.0229813 0.991152 0 50.2837 GTEX-1H2FU-0826-SM-9WYSU 1 C1 2 pieces; includes trivial amount of fat, some evidence of hypertrophy 6.4 Heart Heart - Atrial Appendage 0006631 911 887 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993602 132261 0.980051 0.995244 0.830489 21265 1 76 0.00251558 193 0 7.39734e+07 0.0195513 6.2727e+06 7.43269e+07 4.95515e+06 21278 3.68513e+07 0 0.149561 0.995244 0.82654 7.39734e+07 0.00446747 1.61065e+07 1.01411e+07 1.65708e+07 207 1.64649e+07 9.37902e+06 0.00348991 1.63106e+07 49.7647 0.0843934 0.996887 0 50.7105 GTEX-1H2FU-0926-SM-9WPPT 1 C1 6 pieces; includes up to ~10% mostly attached fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 912 887 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988223 185869 0.976097 0.989857 0.794586 22996 1 76 0.00645323 167 0 7.54154e+07 0.0237031 674350 7.61882e+07 1.2171e+07 23028 3.75626e+07 0 0.181511 0.989857 0.786527 7.54154e+07 0.00696329 1.66764e+07 9.29303e+06 1.67838e+07 151 1.67986e+07 1.33533e+07 0.00670784 1.67792e+07 49.9711 0.00885111 0.991492 0 50.1605 GTEX-1H2FU-1226-SM-9KNVY 2 C1 2 pieces; congestion and some intra-alveolar hemorrhage 7.1 Lung Lung 0008952 917 883 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992305 227372 0.971491 0.993513 0.758839 24997 1 76 0.00266218 279 0 1.08049e+08 0.0281876 701504 1.08754e+08 1.19538e+07 25046 5.38235e+07 0 0.212651 0.993513 0.753917 1.08049e+08 0.00372697 2.40339e+07 1.68665e+07 2.41902e+07 295 2.42225e+07 1.78838e+07 0.00319393 2.41271e+07 49.9013 0.00645035 0.994721 0 50.1621 GTEX-1H2FU-1426-SM-9WPO6 1 C1 2 pieces; lobulated adipose tissue, includes several larger vessels 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 919 882 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98765 175636 0.973291 0.989365 0.77654 23590 1 76 0.00641079 139 0 7.60795e+07 0.0264265 1.19847e+06 7.68973e+07 1.18937e+07 23612 3.78728e+07 0 0.196751 0.989365 0.768281 7.60795e+07 0.00686908 1.67583e+07 8.64922e+06 1.68937e+07 150 1.69152e+07 1.2514e+07 0.00663953 1.68582e+07 49.9156 0.0155853 0.99108 0 50.2011 GTEX-1H2FU-1626-SM-9KNVZ 2 C1 6 pieces; target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 921 881 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992814 206712 0.967878 0.993967 0.774202 24278 1 76 0.00267053 277 0 9.74968e+07 0.0319114 2.05577e+06 9.80886e+07 1.18675e+07 24314 4.85869e+07 0 0.193676 0.993967 0.769531 9.74968e+07 0.00351516 2.13493e+07 1.15652e+07 2.16453e+07 290 2.16166e+07 1.37387e+07 0.00309236 2.14868e+07 49.8494 0.0209583 0.99512 0 50.3442 GTEX-1H2FU-1926-SM-9WPO7 2 C1 2 pieces; congestion 6.6 Spleen Spleen 0002106 925 878 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 EXCLUDE 0.990472 171395 0.950594 0.991699 0.690616 24657 1 76 0.00505353 136 0 7.79782e+07 0.0489154 1.09432e+06 7.8631e+07 1.0972e+07 24692 3.88302e+07 0 0.259978 0.991699 0.684883 7.79782e+07 0.00502689 1.66261e+07 1.31913e+07 1.71534e+07 148 1.71303e+07 1.05569e+07 0.00504023 1.67431e+07 49.4285 0.0139172 0.992925 0 50.7805 GTEX-1H2FU-2326-SM-9WG7R 1 C1 2 pieces; up to ~50% is hilum/vessels, several inclusion cysts with focal calcification 7 Ovary Ovary 0000992 930 876 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991685 95831 0.970275 0.993858 0.753455 21809 1 76 0.00247574 130 0 5.73187e+07 0.02951 657675 5.7673e+07 4.35931e+06 21833 2.85362e+07 0 0.21682 0.993858 0.748827 5.73187e+07 0.00325979 1.25594e+07 8.20739e+06 1.26641e+07 119 1.26734e+07 1.16103e+07 0.00286691 1.26719e+07 49.997 0.0114035 0.99603 0 50.2075 GTEX-1H2FU-3126-SM-9WYUJ 1 C1 4 pieces 6.8 Brain Brain - Cortex 0001870 946 863 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993538 361469 0.964413 0.99513 0.829395 24076 1 76 0.0024418 268 0 8.99152e+07 0.0352985 4.74799e+06 9.03552e+07 6.14993e+06 24099 4.47901e+07 0 0.135018 0.99513 0.825356 8.99152e+07 0.00463153 1.97406e+07 1.30538e+07 2.00702e+07 319 2.00122e+07 1.08195e+07 0.00353491 1.99199e+07 49.8844 0.052548 0.996723 0 50.414 GTEX-1H3NZ-0001-SM-EYYVZ C1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 458 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.987373 570266 0.973874 0.990878 0.832585 21897 1 76 0.00228359 284 0 1.09699e+08 0.0252946 660149 1.10709e+08 3.93678e+06 21921 5.4516e+07 0 0.141289 0.990878 0.824991 1.09699e+08 0.0036401 2.44652e+07 1.31088e+07 2.46772e+07 276 2.47989e+07 2.64688e+07 0.00295945 2.47094e+07 49.9096 0.00596293 0.994383 0 50.2157 GTEX-1H3NZ-0002-SM-AG5Z1 C1 Blood Whole Blood 0013756 458 BP-57318 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H3NZ-0005-SM-A96RG C1 9.1 Blood Whole Blood 0013756 458 BP-57321 RNA isolation_PAXgene Blood RNA (Manual) 10/20/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991786 1.84106e+06 0.929976 0.993252 0.750571 19633 1 76 0.00270675 133 0 8.02933e+07 0.0686732 205731 8.08388e+07 2.81927e+06 19650 3.99549e+07 0 0.179405 0.993252 0.745506 8.02933e+07 0.00319478 1.7191e+07 7.10468e+07 1.73778e+07 150 1.74547e+07 1.54924e+07 0.00295041 1.72735e+07 49.7392 0.00254495 0.994717 0 50.2702 GTEX-1H3NZ-0011-R11b-SM-CE6SF C1, A1 9.2 Brain Brain - Cerebellar Hemisphere 0002037 465 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987348 733710 0.949077 0.989068 0.755263 23591 1 76 0.00782458 135 0 7.98532e+07 0.0505217 1.65302e+06 8.07358e+07 1.24125e+07 23621 3.96812e+07 0 0.193814 0.989068 0.747006 7.98532e+07 0.00789029 1.7299e+07 1.19436e+07 1.73646e+07 164 1.74981e+07 9.87920e+06 0.00785738 1.72906e+07 49.7018 0.0204745 0.990788 0 50.0946 GTEX-1H3NZ-0011-R1a-SM-CKZP5 C1, A1 7.3 Brain Brain - Hippocampus 0001954 465 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991405 614717 0.963416 0.993691 0.834771 23833 1 76 0.00183722 372 0 9.35716e+07 0.0362817 4.64793e+06 9.41658e+07 9.05692e+06 23854 4.65854e+07 0 0.128645 0.993691 0.829504 9.35716e+07 0.00306628 2.03909e+07 2.01915e+07 2.0786e+07 344 2.07893e+07 9.96523e+06 0.00245034 2.05662e+07 49.7302 0.049359 0.995976 0 50.4798 GTEX-1H3NZ-0011-R3b-SM-CMKH2 C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 465 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 EXCLUDE 0.994433 566024 0.953752 0.995401 0.791117 22963 1 76 0.00199144 216 0 8.03014e+07 0.0459645 2.95864e+06 8.06724e+07 5.78668e+06 22988 4.00173e+07 0 0.162635 0.995401 0.787479 8.03014e+07 0.00289181 1.75222e+07 1.2984e+07 1.78072e+07 234 1.76486e+07 1.03255e+07 0.00244119 1.77594e+07 50.1564 0.0366747 0.99637 0 50.4032 GTEX-1H3NZ-0011-R4a-SM-CL54T C1, A1 7.8 Brain Brain - Amygdala 0001876 465 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991558 978138 0.955291 0.993676 0.828838 24033 1 76 0.00256014 269 0 8.41398e+07 0.0443189 4.96007e+06 8.46753e+07 1.12141e+07 24059 4.18564e+07 0 0.126453 0.993676 0.823597 8.41398e+07 0.00364276 1.81543e+07 1.97587e+07 1.86242e+07 271 1.86368e+07 1.00406e+07 0.0031003 1.83164e+07 49.5666 0.0585775 0.995793 0 50.6388 GTEX-1H3NZ-0011-R5a-SM-CM2SP C1, A1 8.6 Brain Brain - Caudate (basal ganglia) 0001873 465 BP-71180 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992607 765332 0.953535 0.994237 0.827539 23963 1 76 0.00185642 267 0 8.10147e+07 0.0462283 4.27538e+06 8.14843e+07 5.26265e+06 23985 4.0334e+07 0 0.125997 0.994237 0.822769 8.10147e+07 0.00281015 1.7584e+07 1.68878e+07 1.77896e+07 316 1.77362e+07 8.6867e+06 0.0023325 1.77696e+07 50.047 0.0524687 0.995866 0 50.2907 GTEX-1H3NZ-0011-R6b-SM-A9G1N C1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 465 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984495 359831 0.959451 0.990407 0.81836 24594 1 76 0.00377906 267 0 9.1423e+07 0.0402852 6.58406e+06 9.23085e+07 8.68026e+06 24615 4.53473e+07 0 0.141091 0.990407 0.810509 9.1423e+07 0.0038198 1.9783e+07 1.95314e+07 2.00543e+07 287 2.01713e+07 9.34948e+06 0.00379904 2.01247e+07 49.9422 0.0713267 0.99632 0 50.3405 GTEX-1H3NZ-0011-R7a-SM-A9SKD C1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 465 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990056 536744 0.960244 0.991658 0.818576 24248 1 76 0.00645347 267 0 1.011e+08 0.0395748 8.65482e+06 1.0195e+08 1.86119e+07 24267 5.0348e+07 0 0.141668 0.991658 0.811748 1.011e+08 0.00744511 2.17925e+07 3.0859e+07 2.23498e+07 307 2.22827e+07 8.24254e+06 0.00694849 2.19794e+07 49.6574 0.0848926 0.993261 0 50.6313 GTEX-1H3NZ-0011-R8a-SM-CKZP6 C1, A1 7.5 Brain Brain - Hypothalamus 0001898 465 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991456 493167 0.960671 0.993749 0.833181 24425 1 76 0.00191347 202 0 7.72237e+07 0.0388678 2.46137e+06 7.77095e+07 7.35152e+06 24442 3.84432e+07 0 0.12749 0.993749 0.827973 7.72237e+07 0.0032436 1.69282e+07 1.23432e+07 1.71149e+07 251 1.7165e+07 1.1018e+07 0.002577 1.70382e+07 49.8147 0.0316739 0.996042 0 50.2742 GTEX-1H3NZ-0011-R9a-SM-ADEH7 C1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 465 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981811 461635 0.964047 0.988679 0.834913 22353 1 76 0.00305522 278 0 7.96693e+07 0.0357254 6.23399e+06 8.05816e+07 8.02206e+06 22374 3.9448e+07 0 0.129135 0.988679 0.82546 7.96693e+07 0.003561 1.73143e+07 1.35848e+07 1.81079e+07 290 1.8088e+07 8.17488e+06 0.00330635 1.77893e+07 49.5837 0.0773625 0.995546 0 51.1202 GTEX-1H3NZ-0126-SM-ACKX7 1 C1 6 pieces; atrophic, thin epidermis; edematous dermis; well trimmed 8 Skin Skin - Sun Exposed (Lower leg) 0004264 521 648 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.99282 325415 0.970689 0.994066 0.783936 25620 1 76 0.00260332 292 0 1.12993e+08 0.0290561 570888 1.13668e+08 1.32184e+07 25664 5.62974e+07 0 0.186753 0.994066 0.779285 1.12993e+08 0.00352505 2.46905e+07 1.1809e+07 2.483e+07 305 2.48462e+07 1.93781e+07 0.00306361 2.4808e+07 49.9615 0.00502242 0.995313 0 50.1408 GTEX-1H3NZ-0326-SM-9MQL6 1 C1 2 pieces; 5% internal fat 8.4 Muscle Muscle - Skeletal 0011907 525 644 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.987371 255716 0.979968 0.989325 0.858848 20585 1 76 0.00529235 139 0 6.36065e+07 0.0197297 808279 6.42929e+07 7.54993e+06 20596 3.16691e+07 0 0.121121 0.989325 0.849679 6.36065e+07 0.00652753 1.37741e+07 5.83618e+06 1.39962e+07 135 1.40159e+07 1.37265e+07 0.00590872 1.38668e+07 49.7325 0.0125718 0.991279 0 50.3999 GTEX-1H3NZ-0526-SM-9YFM6 1 C1 2 pieces; well trimmed: 10% external fat 7.8 Nerve Nerve - Tibial 0001323 538 633 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992589 293075 0.968302 0.994181 0.770311 24515 1 76 0.00241258 296 0 9.82371e+07 0.0313655 400453 9.8812e+07 3.46371e+06 24555 4.89346e+07 0 0.197991 0.994181 0.765829 9.82371e+07 0.0035797 2.16468e+07 7.87777e+06 2.18192e+07 277 2.18528e+07 1.66583e+07 0.00299521 2.17622e+07 49.8961 0.00405268 0.995774 0 50.1982 GTEX-1H3NZ-0926-SM-9YFM7 1 C1 2 pieces, 1 fragmented with large eccentric calcified plaque; other with moderate atheromatous plaque 7.9 Blood Vessel Artery - Coronary 0001621 578 595 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.992827 343453 0.97488 0.994331 0.79684 24192 1 76 0.00296674 291 0 1.28121e+08 0.0246384 338383 1.28851e+08 1.4911e+07 24231 6.38067e+07 0 0.17804 0.994331 0.792323 1.28121e+08 0.00356531 2.76332e+07 1.04384e+07 2.77568e+07 329 2.77814e+07 2.51261e+07 0.00326557 2.77942e+07 50.0115 0.00262615 0.995834 0 50.1115 GTEX-1H3NZ-1026-SM-A9SM5 1 C1 2 pieces; no fat; 10% fibrous content in 1 7.8 Heart Heart - Atrial Appendage 0006631 579 595 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.991493 241320 0.976306 0.992925 0.813175 22882 1 76 0.00593569 153 0 8.4363e+07 0.0234439 1.68155e+06 8.49641e+07 1.32808e+07 22902 4.20269e+07 0 0.163131 0.992925 0.807423 8.4363e+07 0.0075584 1.79497e+07 1.14135e+07 1.81614e+07 185 1.81959e+07 1.32578e+07 0.00674588 1.80085e+07 49.7412 0.0197913 0.994358 0 50.2931 GTEX-1H3NZ-1126-SM-9WYT9 1 C1 2 pieces; in 1 piece a few foci of punched out myofibers, 1 with interstitial inflammatory cells and atrophic myofibers (labeled), consistent with scar from a healed infarct 6.1 Heart Heart - Left Ventricle 0006566 581 593 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99397 124496 0.984918 0.99537 0.838404 19850 1 76 0.00195959 365 0 9.04097e+07 0.0150291 7.11472e+06 9.08302e+07 6.25619e+06 19859 4.50858e+07 0 0.146514 0.99537 0.834522 9.04097e+07 0.00374406 1.96632e+07 3.54963e+07 2.01887e+07 340 2.00121e+07 3.83271e+06 0.00285057 1.98883e+07 49.8449 0.0783299 0.99677 0 50.6593 GTEX-1H3NZ-1226-SM-9MQKT 1 C1 6 pieces; well trimmed; flat plaques 7 Blood Vessel Artery - Aorta 0001496 583 592 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984182 252312 0.975604 0.986424 0.818262 21461 1 76 0.00576094 136 0 6.5451e+07 0.0239745 243823 6.63517e+07 8.36638e+06 21475 3.25463e+07 0 0.157342 0.986424 0.807153 6.5451e+07 0.00720371 1.40946e+07 5.61153e+06 1.41893e+07 137 1.42066e+07 1.24784e+07 0.00648069 1.42243e+07 50.0312 0.0036747 0.988666 0 50.1674 GTEX-1H3NZ-1326-SM-9JGHI 1 C1 6 pieces; foci of chronic inflammation; partial sloughing of epithelium 7.6 Esophagus Esophagus - Mucosa 0006920 587 588 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.991871 350499 0.967826 0.993152 0.732225 26384 1 76 0.00247208 280 0 1.20164e+08 0.0311061 382556 1.20993e+08 6.05258e+06 26436 5.98198e+07 0 0.235602 0.993152 0.727211 1.20164e+08 0.00338002 2.65615e+07 1.48273e+07 2.67732e+07 313 2.67822e+07 1.90342e+07 0.00292547 2.67002e+07 49.9234 0.00316181 0.994433 0 50.1985 GTEX-1H3NZ-1426-SM-9WYTA 1 C1 6 pieces; well dissected muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 588 588 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993473 226145 0.974185 0.994744 0.78675 23372 1 76 0.00246479 211 0 8.96829e+07 0.0255076 587488 9.01568e+07 6.03599e+06 23398 4.46826e+07 0 0.187435 0.994744 0.782614 8.96829e+07 0.0042806 1.94048e+07 7.7562e+06 1.96079e+07 231 1.96239e+07 1.59581e+07 0.00337154 1.94954e+07 49.8357 0.0065163 0.996015 0 50.2603 GTEX-1H3NZ-2026-SM-A8N9P 1 C1 2 pieces; well trimmed, <5% fat content 5.6 Adrenal Gland Adrenal Gland 0002369 603 576 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984771 461482 0.961539 0.987284 0.766403 24379 1 76 0.0111482 142 0 8.10105e+07 0.0381736 3.12934e+06 8.20539e+07 1.55482e+07 24406 4.02513e+07 0 0.195136 0.987284 0.756658 8.10105e+07 0.0107696 1.74342e+07 2.17858e+07 1.78601e+07 161 1.79057e+07 1.13534e+07 0.0109594 1.75956e+07 49.5632 0.0381376 0.989797 0 50.6034 GTEX-1H3NZ-2126-SM-9WPQ6 2 C1 6 pieces; scattered small foci of chronic inflammation; no major vascular or glomerular lesions 6.4 Kidney Kidney - Cortex 0001225 604 575 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98866 395539 0.960586 0.990367 0.803527 23635 1 76 0.00619988 151 0 7.79742e+07 0.0392213 3.66551e+06 7.87326e+07 1.24301e+07 23656 3.88387e+07 0 0.157059 0.990367 0.795787 7.79742e+07 0.00683472 1.7034e+07 2.61216e+07 1.73147e+07 202 1.73667e+07 8.40552e+06 0.00651675 1.71007e+07 49.6141 0.0465565 0.992075 0 50.4085 GTEX-1H3NZ-2226-SM-9WYUT 2 C1 6 pieces; mucosal autolysis varies between 2 and 3 8 Stomach Stomach 0000945 609 571 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992886 279091 0.972612 0.994208 0.767069 24231 1 76 0.00251573 282 0 9.94901e+07 0.0270797 583082 1.0007e+08 6.91472e+06 24267 4.95537e+07 0 0.205544 0.994208 0.762625 9.94901e+07 0.00440674 2.17205e+07 9.03525e+06 2.19108e+07 267 2.19204e+07 1.69547e+07 0.00345998 2.18360e+07 49.9036 0.00582676 0.995529 0 50.218 GTEX-1H3NZ-2526-SM-9KNVO 1 C1 6 pieces; mostly well dissected muscularis 7.6 Colon Colon - Sigmoid 0001159 614 568 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.992914 269555 0.97175 0.993989 0.800643 24574 1 76 0.00272762 281 0 1.01724e+08 0.027893 592821 1.02339e+08 1.25217e+07 24605 5.06915e+07 0 0.171106 0.993989 0.795831 1.01724e+08 0.00333874 2.21381e+07 9.78232e+06 2.23588e+07 270 2.2387e+07 1.82557e+07 0.00303285 2.2219e+07 49.8116 0.00579269 0.995065 0 50.2481 GTEX-1H3NZ-2626-SM-9WPOJ 1 C1 2 pieces; 80% fibrotic & sclerotic tubules with no spermatogenesis; 20% focus of intact tubules with incomplete spermatogenesis (circled); no Leydig cell hyperplasia 7 Testis Testis 0000473 616 566 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 EXCLUDE 0.989879 230688 0.958382 0.991224 0.692146 29674 1 76 0.00531794 207 0 9.7673e+07 0.0413414 2.14534e+06 9.85378e+07 1.41113e+07 29750 4.86484e+07 0 0.266235 0.991224 0.686072 9.7673e+07 0.00538928 2.10957e+07 1.0994e+07 2.17771e+07 219 2.18144e+07 1.3033e+07 0.00535356 2.11738e+07 49.2548 0.0217718 0.992569 0 50.7947 GTEX-1H3NZ-2726-SM-9WYTQ 1 C1 6 pieces; atrophic; edematous dermis 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 617 566 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992634 261582 0.970998 0.994203 0.756584 25471 1 76 0.00242484 284 0 9.78289e+07 0.0286795 491990 9.83992e+07 6.46534e+06 25513 4.87358e+07 0 0.214415 0.994203 0.752198 9.78289e+07 0.00448268 2.1519e+07 9.33522e+06 2.16855e+07 265 2.17061e+07 1.66085e+07 0.00345213 2.16405e+07 49.9244 0.00499994 0.995773 0 50.1927 GTEX-1H3NZ-2826-SM-9WPQ7 1 C1 2 pieces; no nodular hyperplasia 5.8 Prostate Prostate 0002367 619 564 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985746 227170 0.958002 0.98769 0.672572 26139 1 76 0.00657597 133 0 7.90265e+07 0.0417489 939681 8.00114e+07 1.26679e+07 26192 3.93033e+07 0 0.285431 0.98769 0.664293 7.90265e+07 0.00715005 1.72555e+07 9.88897e+06 1.73682e+07 147 1.73876e+07 9.21825e+06 0.00686245 1.73816e+07 49.9914 0.0117443 0.989635 0 50.1627 GTEX-1H3NZ-2926-SM-9WPQ8 1 C1 4 pieces 6.9 Brain Brain - Cerebellum 0002037 635 549 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.989847 510845 0.929159 0.991055 0.675367 24824 1 76 0.00457755 196 0 8.34302e+07 0.0705733 2.4774e+06 8.41833e+07 1.08811e+07 24863 4.15569e+07 0 0.253792 0.991055 0.669326 8.34302e+07 0.00459492 1.71663e+07 2.60924e+07 1.83261e+07 206 1.83564e+07 7.61484e+06 0.00458622 1.72285e+07 48.4153 0.0294287 0.992262 0 51.6338 GTEX-1H3NZ-3026-SM-9JGHW 1 C1 4 pieces 7.1 Brain Brain - Cortex 0001870 638 546 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805,LCSET-7181 05/06/2015 TruSeq.v1 RNASEQ 0.992319 355299 0.958099 0.99361 0.806296 24731 1 76 0.00342988 269 0 9.14688e+07 0.0415597 3.814e+06 9.2057e+07 9.23459e+06 24751 4.55829e+07 0 0.151803 0.99361 0.801144 9.14688e+07 0.00336309 1.96512e+07 1.97469e+07 2.04468e+07 266 2.04036e+07 1.03899e+07 0.00339653 1.97945e+07 49.2424 0.0414308 0.994901 0 50.992 GTEX-1H3NZ-3126-SM-9WPOK 1 C1 1 piece; equal amounts of anterior & posterior lobes [labeled] 7.1 Pituitary Pituitary 0000007 639 546 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988065 210988 0.961158 0.98974 0.735877 26481 1 76 0.00636719 137 0 7.85075e+07 0.0385011 940734 7.93213e+07 1.21882e+07 26528 3.90835e+07 0 0.225281 0.98974 0.728327 7.85075e+07 0.00682172 1.71584e+07 8.5737e+06 1.72680e+07 150 1.72996e+07 1.15852e+07 0.00659407 1.72492e+07 49.927 0.0118598 0.991416 0 50.1592 GTEX-1H3O1-0003-SM-AG5YL B1 Blood Whole Blood 0013756 1112 BP-57318 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H3O1-0005-SM-ACKV8 B1 8 Blood Whole Blood 0013756 1112 BP-57321 RNA isolation_PAXgene Blood RNA (Manual) 10/20/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.983767 1.44514e+06 0.954911 0.985176 0.785028 19915 1 76 0.00295446 201 0 1.14181e+08 0.043955 466294 1.15899e+08 1.56684e+07 19929 5.68274e+07 0 0.169883 0.985176 0.773391 1.14181e+08 0.00383292 2.6127e+07 1.63185e+08 2.63085e+07 242 2.63017e+07 2.86859e+07 0.00339306 2.63256e+07 50.0227 0.00402326 0.986585 0 50.1731 GTEX-1H3O1-0011-R10a-SM-CJI3O B1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 1106 BP-71218 RNA isolation_PAXgene Tissue miRNA 01/27/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992983 1.37272e+06 0.960765 0.994252 0.833648 25067 1 76 0.00206887 375 0 1.20532e+08 0.0386802 4.53003e+06 1.21229e+08 7.35497e+06 25090 6.00058e+07 0 0.127117 0.994252 0.828856 1.20532e+08 0.00246109 2.61324e+07 2.86767e+07 2.65603e+07 352 2.67145e+07 1.61112e+07 0.00226473 2.61141e+07 49.4317 0.0373674 0.99552 0 50.406 GTEX-1H3O1-0011-R11a-SM-A96RV B1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 1106 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991166 541665 0.946568 0.992654 0.747694 23840 1 76 0.0022796 271 0 9.82368e+07 0.0530466 1.92506e+06 9.89638e+07 3.15604e+06 23876 4.8912e+07 0 0.198873 0.992654 0.742202 9.82368e+07 0.00249428 2.11604e+07 1.52929e+07 2.13138e+07 273 2.13551e+07 1.12088e+07 0.00238678 2.12441e+07 49.8697 0.0194522 0.994142 0 50.1805 GTEX-1H3O1-0011-R1b-SM-CL554 B1, A1 7.5 Brain Brain - Hippocampus 0001954 1106 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99189 730794 0.960832 0.99395 0.845118 24493 1 76 0.0025491 379 0 1.00932e+08 0.0388238 4.13782e+06 1.01547e+08 1.29246e+07 24519 5.02338e+07 0 0.115714 0.99395 0.840005 1.00932e+08 0.00425572 2.20816e+07 1.54054e+07 2.25172e+07 374 2.24588e+07 1.28926e+07 0.00340064 2.23432e+07 49.8709 0.040748 0.996009 0 50.4883 GTEX-1H3O1-0011-R2b-SM-CKZOT B1, A1 6 Brain Brain - Substantia nigra 0002038 1106 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991271 304712 0.970374 0.993572 0.863096 22672 1 76 0.00214267 376 0 8.84566e+07 0.029384 1.05052e+07 8.90289e+07 8.5465e+06 22689 4.40543e+07 0 0.107278 0.993572 0.857549 8.84566e+07 0.00365772 1.94669e+07 1.49855e+07 2.0167e+07 355 1.99368e+07 9.00356e+06 0.00289844 1.98569e+07 49.8996 0.117998 0.995873 0 50.8831 GTEX-1H3O1-0011-R3a-SM-ACKVD B1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1106 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.99296 306339 0.960716 0.994442 0.83436 22926 1 76 0.00287316 151 0 6.08735e+07 0.0388749 3.31911e+06 6.12138e+07 8.06136e+06 22940 3.03179e+07 0 0.126356 0.994442 0.829722 6.08735e+07 0.00373751 1.32448e+07 1.36674e+07 1.34506e+07 167 1.34114e+07 7.1251e+06 0.00330469 1.33585e+07 49.9011 0.0542216 0.995924 0 50.3854 GTEX-1H3O1-0011-R4b-SM-A9SKE B1, A1 6.7 Brain Brain - Amygdala 0001876 1106 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990321 623576 0.958571 0.991927 0.834154 23179 1 76 0.00673593 196 0 8.39549e+07 0.0412249 8.19776e+06 8.46381e+07 1.46346e+07 23195 4.18075e+07 0 0.124416 0.991927 0.827421 8.39549e+07 0.00799552 1.80328e+07 3.04808e+07 1.87062e+07 253 1.85232e+07 6.34955e+06 0.00736471 1.83085e+07 49.7085 0.0968566 0.993534 0 50.9164 GTEX-1H3O1-0011-R5b-SM-ADEH8 B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 1106 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981431 779693 0.951275 0.988178 0.828434 24208 1 76 0.00346849 272 0 1.00799e+08 0.0484919 5.85056e+06 1.02005e+08 1.05987e+07 24227 4.99224e+07 0 0.122841 0.988178 0.81864 1.00799e+08 0.00373213 2.14669e+07 2.47258e+07 2.21968e+07 328 2.23162e+07 1.09507e+07 0.00359941 2.19304e+07 49.564 0.0573555 0.994924 0 50.8358 GTEX-1H3O1-0011-R6b-SM-CL54U B1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1106 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993859 609794 0.961225 0.995261 0.845104 24442 1 76 0.00272632 380 0 1.19e+08 0.0385744 1.21256e+07 1.19566e+08 1.49139e+07 24465 5.92908e+07 0 0.116121 0.995261 0.841099 1.19e+08 0.00380357 2.57868e+07 2.6107e+07 2.67457e+07 370 2.65422e+07 1.0943e+07 0.00326419 2.61236e+07 49.6025 0.101413 0.996663 0 50.9127 GTEX-1H3O1-0011-R7a-SM-CE6SJ B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1106 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989269 709152 0.956639 0.990963 0.834398 23232 1 76 0.00775888 157 0 7.70557e+07 0.0431496 5.67683e+06 7.77584e+07 1.16031e+07 23242 3.83294e+07 0 0.122241 0.990963 0.826857 7.70557e+07 0.00773001 1.66672e+07 2.06339e+07 1.69826e+07 201 1.7005e+07 7.28615e+06 0.00774447 1.67602e+07 49.6375 0.073006 0.992657 0 50.4686 GTEX-1H3O1-0011-R8a-SM-CL555 B1, A1 7.1 Brain Brain - Hypothalamus 0001898 1106 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99206 613395 0.964878 0.994066 0.850656 24440 1 76 0.00256183 380 0 1.16386e+08 0.0348587 7.72504e+06 1.1708e+08 1.4011e+07 24462 5.79398e+07 0 0.114223 0.994066 0.845608 1.16386e+08 0.00425114 2.54475e+07 1.69672e+07 2.61681e+07 408 2.5956e+07 1.22278e+07 0.00340478 2.58534e+07 49.9009 0.0659807 0.996072 0 50.6981 GTEX-1H3O1-0011-R9b-SM-CM2SQ B1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 1106 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993017 300982 0.954854 0.994261 0.832439 23075 1 76 0.00203065 288 0 7.65645e+07 0.044905 3.24113e+06 7.70065e+07 4.99765e+06 23091 3.81356e+07 0 0.122415 0.994261 0.827662 7.65645e+07 0.0028981 1.67961e+07 9.32577e+06 1.72122e+07 262 1.69695e+07 8.82397e+06 0.00246383 1.71313e+07 50.2373 0.0420891 0.995506 0 50.6118 GTEX-1H3O1-0226-SM-9WYSW 1 B1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 1164 982 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994524 128141 0.979265 0.995829 0.807314 22688 1 76 0.00267365 264 0 7.94612e+07 0.0206032 3.0166e+06 7.97941e+07 5.20389e+06 22709 3.9613e+07 0 0.171951 0.995829 0.803946 7.94612e+07 0.00446288 1.72165e+07 1.43284e+07 1.75387e+07 258 1.75412e+07 7.41445e+06 0.00356709 1.72919e+07 49.6422 0.0378047 0.997134 0 50.4636 GTEX-1H3O1-0326-SM-9WPO8 1 B1 2 pieces, marked congestion & atalectasis 6.1 Lung Lung 0008952 1171 975 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.989445 174298 0.964184 0.990902 0.751242 25520 1 76 0.00548057 270 0 1.00768e+08 0.0355784 1.95892e+06 1.01694e+08 1.51792e+07 25562 5.01744e+07 0 0.212942 0.990902 0.744407 1.00768e+08 0.00562065 2.16099e+07 1.17869e+07 2.26687e+07 292 2.26068e+07 1.12616e+07 0.00555051 2.18016e+07 49.0933 0.0192629 0.992359 0 51.1956 GTEX-1H3O1-0426-SM-9YFKY 0 B1 6 pieces, no dermal fat; squamous epithelium is ~30-35 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1172 974 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7768 08/26/2015 TruSeq.v1 RNASEQ 0.990055 330382 0.973063 0.993089 0.791297 26541 1 76 0.00260043 394 0 1.51395e+08 0.026607 838072 1.52448e+08 1.28238e+07 26596 7.53162e+07 0 0.181766 0.993089 0.785829 1.51395e+08 0.00379939 3.31306e+07 1.74202e+07 3.33995e+07 408 3.34746e+07 2.55601e+07 0.00319808 3.34818e+07 50.0054 0.00549742 0.996124 0 50.202 GTEX-1H3O1-0526-SM-9MQLS 0 B1 2 pieces, ~30% fascia/vascular elements, rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1176 970 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984126 272956 0.974966 0.986455 0.786866 22578 1 76 0.00583921 136 0 6.43123e+07 0.0247065 344337 6.51954e+07 8.20366e+06 22603 3.19792e+07 0 0.1881 0.986455 0.776208 6.43123e+07 0.00734336 1.40691e+07 6.56052e+06 1.42371e+07 138 1.42615e+07 1.05914e+07 0.00658951 1.41901e+07 49.8744 0.00528162 0.988784 0 50.2968 GTEX-1H3O1-0626-SM-9MQM4 0 B1 2 pieces, minimal interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 1180 966 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.982545 346856 0.951566 0.984706 0.734124 22205 1 76 0.00560237 108 0 6.42333e+07 0.0482015 278476 6.5231e+07 8.10676e+06 22240 3.19501e+07 0 0.217442 0.984706 0.722896 6.42333e+07 0.00706145 1.31469e+07 1.36308e+07 1.33899e+07 121 1.33931e+07 1.04207e+07 0.00633031 1.32778e+07 49.7838 0.00426908 0.986867 0 50.4578 GTEX-1H3O1-0826-SM-9YFMA 0 B1 1 piece, section of peripheral nerve 7.4 Nerve Nerve - Tibial 0001323 1209 937 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.991434 558453 0.957309 0.993007 0.723276 25433 1 76 0.00267363 288 0 9.95633e+07 0.0423217 280550 1.00265e+08 3.76594e+06 25478 4.95771e+07 0 0.234032 0.993007 0.718218 9.95633e+07 0.00361365 2.16019e+07 2.05024e+07 2.18181e+07 258 2.18579e+07 1.52396e+07 0.0031429 2.17207e+07 49.8426 0.0027981 0.994579 0 50.249 GTEX-1H3O1-1126-SM-9WPO9 3 B1 2 pieces, marked congestion and autolysis 5.7 Spleen Spleen 0002106 1225 921 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.984229 229755 0.9567 0.985877 0.739007 24284 1 76 0.00670248 123 0 6.97676e+07 0.0429976 1.60996e+06 7.07671e+07 1.10371e+07 24314 3.47092e+07 0 0.217693 0.985877 0.72857 6.97676e+07 0.00745253 1.51288e+07 1.59094e+07 1.53432e+07 143 1.53247e+07 8.42083e+06 0.00707688 1.52603e+07 49.8947 0.0227501 0.987526 0 50.3518 GTEX-1H3O1-1326-SM-9MQLD 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~30-35 microns 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1248 898 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984018 258069 0.973196 0.986417 0.775414 22644 1 76 0.00582936 133 0 6.43804e+07 0.0265635 350420 6.52669e+07 7.95293e+06 22675 3.20103e+07 0 0.197782 0.986417 0.764882 6.43804e+07 0.00725055 1.40995e+07 8.11885e+06 1.42757e+07 135 1.42937e+07 1.01741e+07 0.00653823 1.42299e+07 49.8882 0.00536903 0.988817 0 50.3105 GTEX-1H3O1-1626-SM-9JGH8 2 B1 1 piece, adenohypophysis and dura , ~10-20% of specimen(delineated) 6.8 Pituitary Pituitary 0000007 1335 811 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993775 184418 0.962006 0.994896 0.787734 24487 1 76 0.0020099 129 0 6.20801e+07 0.0377675 322959 6.23986e+07 3.09274e+06 24517 3.09444e+07 0 0.174272 0.994896 0.783713 6.20801e+07 0.00293217 1.31294e+07 7.92445e+06 1.33158e+07 145 1.33101e+07 9.95554e+06 0.00247052 1.3203e+07 49.798 0.00517574 0.996017 0 50.3525 GTEX-1H3O1-1726-SM-9WYSR 1 B1 2 pieces, no abnormalities 6.4 Brain Brain - Cortex 0001870 1342 804 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993774 145918 0.966093 0.9951 0.820469 24236 1 76 0.00253449 274 0 8.96103e+07 0.0336279 4.05904e+06 9.00516e+07 5.37698e+06 24254 4.46619e+07 0 0.145624 0.9951 0.816448 8.96103e+07 0.00419082 1.96044e+07 1.15794e+07 2.00789e+07 302 1.994e+07 9.64813e+06 0.00336155 1.98315e+07 49.8636 0.0450746 0.996425 0 50.5978 GTEX-1H3O1-1826-SM-A96TO 1 B1 2 pieces, no abnormalities 6.6 Brain Brain - Cerebellum 0002037 1343 803 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991388 292970 0.950425 0.99267 0.737431 23221 1 76 0.00231501 155 0 7.14044e+07 0.0492704 1.60344e+06 7.19317e+07 2.62426e+06 23247 3.55692e+07 0 0.212994 0.99267 0.732025 7.14044e+07 0.00251444 1.54973e+07 1.0041e+07 1.56665e+07 180 1.56715e+07 8.06813e+06 0.0024146 1.55719e+07 49.8406 0.0222911 0.993951 0 50.2715 GTEX-1H3VE-0001-SM-AG5YN B1 Blood Whole Blood 0013756 732 BP-57445 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/23/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H3VE-0011-R10b-SM-A9SKC B1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 740 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989453 372307 0.962986 0.991131 0.853741 22933 1 76 0.00650467 197 0 7.91706e+07 0.0367776 6.80952e+06 7.9879e+07 1.39472e+07 22946 3.94222e+07 0 0.109246 0.991131 0.846169 7.91706e+07 0.0081727 1.72491e+07 1.57402e+07 1.76926e+07 227 1.76196e+07 7.80687e+06 0.00733727 1.74202e+07 49.7155 0.0852478 0.992808 0 50.6346 GTEX-1H3VE-0011-R11b-SM-C1YRP B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 740 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989365 936370 0.940982 0.992066 0.745694 23824 1 76 0.00200618 373 0 1.0148e+08 0.0587198 2.01072e+06 1.02292e+08 4.51236e+06 23861 5.04527e+07 0 0.195287 0.992066 0.739778 1.0148e+08 0.0025345 2.1651e+07 2.10658e+07 2.1892e+07 339 2.19425e+07 1.11199e+07 0.00226962 2.18416e+07 49.8848 0.0196567 0.994766 0 50.2768 GTEX-1H3VE-0011-R1a-SM-A9G1K B1, A1 6.4 Brain Brain - Hippocampus 0001954 740 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983494 518723 0.959394 0.990042 0.846504 22229 1 76 0.00394233 268 0 8.51803e+07 0.0404468 1.02287e+07 8.60371e+07 8.33862e+06 22241 4.22355e+07 0 0.11289 0.990042 0.838075 8.51803e+07 0.00380071 1.83283e+07 2.86852e+07 1.90396e+07 296 1.89878e+07 6.17195e+06 0.00387291 1.88471e+07 49.8141 0.118888 0.99659 0 50.9517 GTEX-1H3VE-0011-R2a-SM-CE6SA B1, A1 5.6 Brain Brain - Substantia nigra 0002038 740 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989394 289259 0.979356 0.991085 0.877926 20030 1 76 0.00748324 183 0 6.9201e+07 0.0204902 6.60683e+06 6.98235e+07 1.01634e+07 20035 3.44314e+07 0 0.101429 0.991085 0.870099 6.9201e+07 0.00754809 1.52029e+07 1.55703e+07 1.58227e+07 207 1.55504e+07 5.40816e+06 0.00751561 1.55468e+07 49.9942 0.0946219 0.992776 0 50.9987 GTEX-1H3VE-0011-R3a-SM-CE6SK B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 740 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988674 767209 0.950981 0.990669 0.840614 20026 1 76 0.00760092 150 0 6.5792e+07 0.0489286 1.22376e+07 6.64117e+07 1.01994e+07 20033 3.27262e+07 0 0.110368 0.990669 0.83277 6.5792e+07 0.00786459 1.4078e+07 3.49504e+07 1.46347e+07 198 1.44741e+07 2.82591e+06 0.00773249 1.43414e+07 49.7698 0.184269 0.992663 0 50.9695 GTEX-1H3VE-0011-R5a-SM-CKZOU B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 740 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990944 724286 0.953417 0.993453 0.806327 24238 1 76 0.00206935 191 0 7.22543e+07 0.0462974 3.50982e+06 7.27305e+07 7.11319e+06 24266 3.59503e+07 0 0.14709 0.993453 0.801048 7.22543e+07 0.00352398 1.56245e+07 1.86849e+07 1.59568e+07 205 1.59681e+07 8.68631e+06 0.00279483 1.57787e+07 49.7017 0.0482578 0.995962 0 50.5261 GTEX-1H3VE-0011-R6b-SM-A9G1M B1, A1 5.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 740 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98845 371932 0.969108 0.992562 0.846969 20439 1 76 0.00385118 263 0 7.72796e+07 0.0308277 1.31617e+07 7.78587e+07 6.70323e+06 20448 3.84238e+07 0 0.12214 0.992562 0.840669 7.72796e+07 0.00359203 1.66271e+07 3.56302e+07 1.7357e+07 291 1.71134e+07 3.28046e+06 0.00372383 1.70817e+07 49.9537 0.169046 0.996675 0 51.0738 GTEX-1H3VE-0011-R7b-SM-CE6S9 B1, A1 5.8 Brain Brain - Putamen (basal ganglia) 0001874 740 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988449 515268 0.972917 0.990734 0.862742 20804 1 76 0.00735907 191 0 7.48253e+07 0.0269322 8.40719e+06 7.55252e+07 1.09612e+07 20812 3.72095e+07 0 0.110174 0.990734 0.854748 7.48253e+07 0.00821897 1.63891e+07 2.17056e+07 1.67752e+07 216 1.65948e+07 6.07529e+06 0.00778803 1.66873e+07 50.1389 0.111316 0.993019 0 50.5821 GTEX-1H3VE-0011-R8b-SM-A9G1L B1, A1 7.8 Brain Brain - Hypothalamus 0001898 740 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984872 347436 0.958703 0.990167 0.759106 25733 1 76 0.00406753 274 0 9.37581e+07 0.0408423 1.04597e+06 9.46892e+07 8.25962e+06 25783 4.65062e+07 0 0.199597 0.990167 0.751642 9.37581e+07 0.00376732 2.03944e+07 1.21665e+07 2.06905e+07 254 2.08969e+07 1.39942e+07 0.00392019 2.06455e+07 49.6974 0.0110463 0.995462 0 50.3603 GTEX-1H3VE-0126-SM-9WYTW 1 B1 2 pieces; ~3% and 10% internal fat, rare atrophic fibers 7.4 Muscle Muscle - Skeletal 0011907 1083 597 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993564 253231 0.982933 0.994717 0.871145 19809 1 76 0.00210869 285 0 9.3292e+07 0.0167999 873257 9.37875e+07 6.03754e+06 19819 4.65111e+07 0 0.111788 0.994717 0.866543 9.3292e+07 0.0041249 2.02563e+07 1.276e+07 2.05052e+07 272 2.05123e+07 2.02001e+07 0.00311563 2.03484e+07 49.7996 0.00931102 0.99587 0 50.3053 GTEX-1H3VE-0226-SM-9WYST 1 B1 2 pieces; mature adipose tissue <10% fibrovascular tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 1084 596 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992853 259552 0.977704 0.994422 0.788859 23880 1 76 0.00250934 277 0 1.0835e+08 0.0219881 974552 1.08957e+08 7.50719e+06 23910 5.39704e+07 0 0.188845 0.994422 0.784458 1.0835e+08 0.00436465 2.39104e+07 1.14222e+07 2.41701e+07 322 2.41762e+07 1.8065e+07 0.00343553 2.40678e+07 49.8877 0.00894434 0.99599 0 50.2701 GTEX-1H3VE-0326-SM-9YFLH 1 B1 6 pieces; essentially well trimmed; epidermis ~35 microns 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1087 593 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.99385 213708 0.977916 0.995166 0.839005 23343 1 76 0.00237005 301 0 9.94057e+07 0.0217354 532358 9.98886e+07 3.50726e+06 23363 4.95399e+07 0 0.138911 0.995166 0.834949 9.94057e+07 0.00357247 2.1689e+07 9.83837e+06 2.19029e+07 294 2.18833e+07 1.94308e+07 0.00297047 2.18362e+07 49.9461 0.00532952 0.996481 0 50.2453 GTEX-1H3VE-0426-SM-9WPOM 1 B1 2 pieces; arrested spermatogenesis with spared Sertoli cells; peritubular fibrosis 6 Testis Testis 0000473 1093 587 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 EXCLUDE 0.986551 286222 0.959774 0.98844 0.730421 25754 1 76 0.00654933 125 0 7.24093e+07 0.0400261 2.09989e+06 7.32562e+07 1.15242e+07 25791 3.603e+07 0 0.229353 0.98844 0.721977 7.24093e+07 0.00717015 1.58194e+07 8.7543e+06 1.59747e+07 145 1.59922e+07 8.75818e+06 0.00685915 1.59244e+07 49.8939 0.028665 0.990328 0 50.2442 GTEX-1H3VE-0526-SM-9WYTC 1 B1 2 pieces; patent lumen, mild plaque and medial calcifications (outlined); attached adventitia up to 0.86mm 7.5 Blood Vessel Artery - Tibial 0007610 1095 585 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992631 167142 0.976004 0.99419 0.817691 21957 1 76 0.002501 210 0 8.97534e+07 0.0236326 373065 9.02779e+07 5.98871e+06 21984 4.46945e+07 0 0.158313 0.99419 0.81294 8.97534e+07 0.00434861 1.93764e+07 7.34673e+06 1.95873e+07 238 1.95883e+07 1.69218e+07 0.00342336 1.95107e+07 49.9008 0.00413241 0.995749 0 50.2705 GTEX-1H3VE-0626-SM-9WYSJ 1 B1 2 pieces; 10% and 20% internal/external fat 5.6 Nerve Nerve - Tibial 0001323 1098 582 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993218 192396 0.969836 0.994464 0.764973 23861 1 76 0.00253515 180 0 8.03749e+07 0.0299002 649572 8.08224e+07 5.51874e+06 23895 4.0037e+07 0 0.204864 0.994464 0.760737 8.03749e+07 0.00444184 1.76386e+07 8.01417e+06 1.77935e+07 192 1.77594e+07 1.23122e+07 0.0034873 1.7771e+07 50.0163 0.00803703 0.995709 0 50.2186 GTEX-1H3VE-0726-SM-9YFL5 1 B1 6 pieces; essentially well trimmed with numerous empty spaces likely fixation problem (rep outlined) 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1103 577 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.992945 234218 0.97524 0.99375 0.740972 24903 1 76 0.0025701 385 0 1.49069e+08 0.0245219 1.62063e+06 1.50007e+08 8.63361e+06 24972 7.42819e+07 0 0.234268 0.99375 0.736341 1.49069e+08 0.00321116 3.30551e+07 1.64495e+07 3.33142e+07 396 3.32264e+07 2.25976e+07 0.00289037 3.32817e+07 50.0416 0.0108037 0.994553 0 50.1952 GTEX-1H3VE-0826-SM-9KNVQ 2 B1 2 pieces; mild interstitial fibrosis and trivial external fat (outlined) 6.7 Thyroid Thyroid 0002046 1135 545 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993287 174446 0.964847 0.994313 0.775326 23850 1 76 0.00265296 170 0 8.39428e+07 0.0348425 374740 8.4423e+07 9.62185e+06 23879 4.18372e+07 0 0.189521 0.994313 0.770916 8.39428e+07 0.00343018 1.83276e+07 1.21228e+07 1.84529e+07 183 1.8459e+07 1.57041e+07 0.00304117 1.84086e+07 49.9318 0.00443884 0.995339 0 50.1703 GTEX-1H3VE-1326-SM-9WYTB 1 B1 6 pieces; well trimmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 1145 535 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 EXCLUDE 0.991511 89710 0.97393 0.993453 0.866049 20853 1 76 0.00247522 366 0 8.13307e+07 0.0259917 1.11614e+07 8.18666e+07 6.00984e+06 20866 4.05143e+07 0 0.107881 0.993453 0.860379 8.13307e+07 0.00443733 1.79719e+07 1.14635e+07 1.89423e+07 358 1.87541e+07 4.6447e+06 0.00345436 1.82703e+07 49.3467 0.136336 0.995396 0 51.3145 GTEX-1H3VE-1426-SM-9WYSK 2 B1 6 pieces; well trimmed target muscularis 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 1148 532 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992144 179958 0.969163 0.993526 0.774686 23241 1 76 0.0025747 161 0 7.65868e+07 0.0306239 1.83375e+06 7.70858e+07 5.29476e+06 23270 3.81368e+07 0 0.194477 0.993526 0.769671 7.65868e+07 0.0046588 1.67288e+07 8.25317e+06 1.69086e+07 183 1.68688e+07 1.1503e+07 0.0036153 1.68738e+07 50.0074 0.0237884 0.994908 0 50.2673 GTEX-1H3VE-1926-SM-9YFL4 1 B1 2 pieces; large central defects (? poor fixation) 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1166 514 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992231 133984 0.97824 0.993801 0.831714 20658 1 76 0.00250002 127 0 5.203e+07 0.021499 732310 5.23545e+07 1.95364e+06 20666 2.59119e+07 0 0.146526 0.993801 0.826558 5.203e+07 0.00358649 1.14299e+07 5.66031e+06 1.15373e+07 131 1.15287e+07 9.95285e+06 0.0030424 1.15214e+07 49.984 0.0139875 0.995372 0 50.2337 GTEX-1H3VE-2326-SM-9KNVU 1 B1 6 pieces; essentially well trimmed target muscularis; attached one tiny fragment of autolyzed mucosa (outlined) 5.8 Colon Colon - Sigmoid 0001159 1212 468 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.989466 166152 0.970163 0.990479 0.803438 22915 1 76 0.00272085 176 0 8.23982e+07 0.0295388 1.38664e+06 8.31902e+07 1.00844e+07 22938 4.10398e+07 0 0.166724 0.990479 0.795789 8.23982e+07 0.00350182 1.77167e+07 9.58228e+06 1.78952e+07 201 1.78465e+07 1.39897e+07 0.00311094 1.78543e+07 50.011 0.0166683 0.991492 0 50.2507 GTEX-1H3VE-2626-SM-9WG7Y 2 B1 1 piece; 85% adenohypophysis and 15% neurohypophysis 6.5 Pituitary Pituitary 0000007 1286 394 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.991035 381521 0.961106 0.993335 0.766592 25090 1 76 0.00237291 210 0 1.03014e+08 0.0385866 764194 1.03705e+08 7.67262e+06 25134 5.12684e+07 0 0.194514 0.993335 0.761482 1.03014e+08 0.00357711 2.13445e+07 2.61726e+07 2.16056e+07 236 2.16397e+07 1.88911e+07 0.00297361 2.15416e+07 49.8864 0.00736892 0.995634 0 50.304 GTEX-1H3VE-2726-SM-9WPP3 2 B1 4 pieces; meningeal coverage noted in 2 of 4 pieces (arrows); ensquared portion of cerebellum 5.9 Brain Brain - Cortex 0001870 1292 388 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98787 656320 0.94677 0.989812 0.809719 23325 1 76 0.00626707 196 0 7.7825e+07 0.0530152 6.69929e+06 7.8626e+07 1.22984e+07 23341 3.8754e+07 0 0.137052 0.989812 0.80147 7.7825e+07 0.00716939 1.66319e+07 3.63321e+07 1.70838e+07 222 1.69708e+07 6.63213e+06 0.00671735 1.68727e+07 49.8551 0.0852044 0.991755 0 50.6702 GTEX-1H3VE-2826-SM-9WPOL 1 B1 4 pieces; Purkinje cells present 6.5 Brain Brain - Cerebellum 0002037 1294 386 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987463 305289 0.954714 0.989224 0.787628 24037 1 76 0.00648639 155 0 7.9377e+07 0.0450393 2.9343e+06 8.02417e+07 1.2819e+07 24060 3.95142e+07 0 0.167086 0.989224 0.779141 7.9377e+07 0.00695959 1.71881e+07 1.58172e+07 1.74603e+07 196 1.74414e+07 8.5677e+06 0.00672257 1.73289e+07 49.8383 0.0365682 0.990986 0 50.3928 GTEX-1H3VY-0001-SM-EYYVY B1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -30 BP-57432 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989935 413983 0.968177 0.992202 0.817825 20295 1 76 0.0022682 131 0 5.75586e+07 0.0310222 237696 5.8011e+07 2.04363e+06 20308 2.86418e+07 0 0.150352 0.992202 0.811447 5.75586e+07 0.00289597 1.27418e+07 8.11618e+06 1.28694e+07 122 1.29052e+07 1.36129e+07 0.00258137 1.28292e+07 49.8524 0.00409743 0.994468 0 50.249 GTEX-1H3VY-0004-SM-AG5YM B1 Blood Whole Blood 0013756 -30 BP-57445 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/23/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H3VY-0005-SM-A8N7Q B1 7.2 Blood Whole Blood 0013756 -30 BP-57446 RNA isolation_PAXgene Blood RNA (Manual) 10/23/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.9827 2.19505e+06 0.905341 0.985686 0.744159 19923 1 76 0.01065 120 0 7.11558e+07 0.094243 400195 7.21891e+07 1.2131e+07 19937 3.53431e+07 0 0.161181 0.985686 0.733508 7.11558e+07 0.0123187 1.46246e+07 7.77486e+07 1.48955e+07 121 1.49037e+07 1.35046e+07 0.0114818 1.48976e+07 49.9899 0.0055437 0.988673 0 50.4589 GTEX-1H3VY-0126-SM-ACKXD 1 B1 6 pieces; include up to 20% mostly periadnexal fat, epidermis measures 34 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 426 1400 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991617 439938 0.968849 0.993409 0.768532 26040 1 76 0.0027403 297 0 1.12462e+08 0.0309048 800746 1.13208e+08 1.50271e+07 26090 5.5992e+07 0 0.200316 0.993409 0.763467 1.12462e+08 0.00392019 2.46402e+07 1.33988e+07 2.48563e+07 307 2.48844e+07 1.84649e+07 0.00332918 2.4802e+07 49.9171 0.00707324 0.995201 0 50.2183 GTEX-1H3VY-0226-SM-9YFMF 1 B1 2 pieces; one piece is incomplete section (? fixation), up to ~30% fibrous/nerve tissue 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 428 1398 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.993785 266573 0.972897 0.99507 0.787346 25134 1 76 0.00284731 383 0 1.18547e+08 0.0268344 490124 1.19134e+08 1.43725e+07 25174 5.90933e+07 0 0.185551 0.99507 0.783464 1.18547e+08 0.003356 2.60166e+07 1.23897e+07 2.61961e+07 339 2.61686e+07 2.03086e+07 0.00310133 2.61924e+07 50.0228 0.00411405 0.996354 0 50.1719 GTEX-1H3VY-0326-SM-9WYU6 0 B1 2 pieces 8.2 Muscle Muscle - Skeletal 0011907 430 1396 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994843 225477 0.982249 0.99623 0.877136 19641 1 76 0.00195508 279 0 9.61282e+07 0.0175166 1.10098e+06 9.6492e+07 6.32555e+06 19650 4.79248e+07 0 0.105113 0.99623 0.873829 9.61282e+07 0.00373081 2.10027e+07 1.1791e+07 2.12635e+07 294 2.12513e+07 1.88361e+07 0.00284171 2.11262e+07 49.8524 0.0114101 0.997616 0 50.3085 GTEX-1H3VY-0426-SM-9YFMD 1 B1 2 pieces; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 435 1391 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.99325 233756 0.975238 0.994524 0.827662 20786 1 76 0.00225725 141 0 6.54232e+07 0.0243631 189864 6.57834e+07 2.25295e+06 20805 3.25952e+07 0 0.147576 0.994524 0.82313 6.54232e+07 0.0034714 1.4129e+07 4.76883e+06 1.42377e+07 152 1.42501e+07 1.28145e+07 0.00286355 1.41983e+07 49.909 0.0028862 0.995798 0 50.1916 GTEX-1H3VY-0526-SM-9MQKE 0 B1 2 pieces; well trimmed, trivial attachment of fat 7.3 Nerve Nerve - Tibial 0001323 436 1390 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.98169 219440 0.967646 0.983777 0.757048 23693 1 76 0.00571554 130 0 6.54311e+07 0.0320887 197920 6.65101e+07 8.02343e+06 23722 3.25629e+07 0 0.210599 0.983777 0.744766 6.54311e+07 0.00683172 1.43348e+07 6.14287e+06 1.44969e+07 133 1.45113e+07 1.01802e+07 0.00627244 1.44502e+07 49.8946 0.00297579 0.985865 0 50.2811 GTEX-1H3VY-0926-SM-ACKXE 0 B1 2 pieces; fat with ~15 and 30% fibrous tissue, no ductal elements seen 6.5 Breast Breast - Mammary Tissue 0008367 458 1368 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992561 174394 0.974888 0.994014 0.812153 22639 1 76 0.00265167 207 0 7.52009e+07 0.0248575 429163 7.56538e+07 1.03113e+07 22664 3.74629e+07 0 0.162734 0.994014 0.807292 7.52009e+07 0.00323709 1.64596e+07 9.24447e+06 1.66618e+07 211 1.66682e+07 1.14454e+07 0.00294396 1.65542e+07 49.8284 0.00567272 0.995467 0 50.3053 GTEX-1H3VY-1026-SM-ACKXF 0 B1 6 pieces; several include >1mm adventitia/fat/vasa vasorum, mild atherosclerosis 6.5 Blood Vessel Artery - Aorta 0001496 462 1364 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992124 181932 0.973497 0.993747 0.798033 22052 1 76 0.00282491 158 0 7.37494e+07 0.0261313 213644 7.42135e+07 1.05697e+07 22075 3.6718e+07 0 0.175464 0.993747 0.793042 7.37494e+07 0.0037643 1.60057e+07 5.9089e+06 1.61849e+07 166 1.61857e+07 1.29759e+07 0.00329384 1.61165e+07 49.8929 0.00287878 0.995369 0 50.2783 GTEX-1H3VY-1126-SM-A96TP 1 B1 2 pieces; includes <10% fat 7.5 Heart Heart - Atrial Appendage 0006631 460 1366 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99341 187392 0.973477 0.994777 0.798138 22791 1 76 0.00168595 196 0 8.01492e+07 0.0263139 1.22774e+06 8.05699e+07 2.83422e+06 22819 3.99548e+07 0 0.175339 0.994777 0.793969 8.01492e+07 0.00207609 1.72443e+07 7.99376e+06 1.75018e+07 247 1.74445e+07 1.22206e+07 0.00188075 1.73897e+07 49.9214 0.0152382 0.996144 0 50.3705 GTEX-1H3VY-1326-SM-9WPOA 1 B1 2 pieces; one piece is ~70% fat/vein/nerve 6.3 Blood Vessel Artery - Coronary 0001621 468 1358 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985362 194673 0.972076 0.986927 0.804889 22640 1 76 0.00630357 127 0 6.85015e+07 0.0276281 389690 6.94089e+07 1.08773e+07 22658 3.41052e+07 0 0.167187 0.986927 0.794367 6.85015e+07 0.00679824 1.48342e+07 7.01272e+06 1.49699e+07 141 1.49499e+07 1.17487e+07 0.00655051 1.49546e+07 50.0079 0.00561441 0.988493 0 50.2276 GTEX-1H3VY-1426-SM-9WPOB 0 B1 2 pieces; includes pleura (target is 1cm below pleura), collapse and some emphysematous change, pneumonia 7.9 Lung Lung 0008952 471 1355 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986801 260359 0.973986 0.988685 0.771541 24215 1 76 0.0065267 132 0 7.15374e+07 0.0254998 280383 7.23561e+07 1.14281e+07 24251 3.55983e+07 0 0.202445 0.988685 0.762812 7.15374e+07 0.00713531 1.58921e+07 7.39157e+06 1.59988e+07 140 1.60153e+07 1.19225e+07 0.00683043 1.6001e+07 49.9776 0.00387504 0.990569 0 50.1673 GTEX-1H3VY-1526-SM-9WG7S 1 B1 2 pieces 7.2 Spleen Spleen 0002106 476 1350 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990706 169239 0.961298 0.992688 0.716821 24686 1 76 0.00302356 137 0 7.54585e+07 0.0371352 233548 7.60143e+07 4.85743e+06 24732 3.75131e+07 0 0.244477 0.992688 0.71158 7.54585e+07 0.0041514 1.65752e+07 9.5579e+06 1.67006e+07 151 1.67516e+07 1.15863e+07 0.00358636 1.66674e+07 49.874 0.00307242 0.994671 0 50.1884 GTEX-1H3VY-1826-SM-9JGI4 1 B1 2 pieces; include 20 and 40% attached fat, adrenal cortex and medulla 8.2 Adrenal Gland Adrenal Gland 0002369 483 1343 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994419 287779 0.971683 0.995576 0.804563 26080 1 76 0.00184558 379 0 1.3331e+08 0.0280105 1.55421e+06 1.33902e+08 6.31168e+06 26129 6.64707e+07 0 0.16712 0.995576 0.801004 1.3331e+08 0.00277198 2.9215e+07 1.40369e+07 2.95435e+07 339 2.94854e+07 2.06758e+07 0.00230824 2.94046e+07 49.9313 0.011607 0.996733 0 50.2795 GTEX-1H3VY-1926-SM-9JGHJ 1 B1 6 pieces; glomeruli in all sections, some vascular thickening 6.2 Kidney Kidney - Cortex 0001225 482 1344 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993603 305146 0.974831 0.994898 0.820386 25313 1 76 0.00180064 373 0 1.35037e+08 0.0249858 2.35366e+06 1.3573e+08 6.66378e+06 25349 6.73243e+07 0 0.154445 0.994898 0.816201 1.35037e+08 0.00279056 2.96579e+07 1.61593e+07 3.02159e+07 371 3.01497e+07 1.62997e+07 0.00229496 2.98727e+07 49.7693 0.0173408 0.996194 0 50.466 GTEX-1H3VY-2026-SM-9JGHK 1 B1 6 pieces; erosive esophagitis, fungal organisms present 8.9 Esophagus Esophagus - Mucosa 0006920 499 1327 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.994066 159990 0.975145 0.99538 0.807531 22406 1 76 0.00184341 117 0 5.53527e+07 0.0245894 149416 5.56097e+07 2.77294e+06 22419 2.75917e+07 0 0.167614 0.99538 0.8038 5.53527e+07 0.00291445 1.23499e+07 5.86485e+06 1.24754e+07 124 1.24812e+07 1.10018e+07 0.00237822 1.24135e+07 49.8641 0.00268687 0.996694 0 50.2528 GTEX-1H3VY-2226-SM-9WYU7 0 B1 6 pieces; muscularis, includes residual fat/fibrous/vascular tissue 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 505 1321 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992994 222396 0.971076 0.994534 0.789293 23978 1 76 0.00232741 275 0 1.01302e+08 0.0286989 496469 1.01858e+08 7.00164e+06 24013 5.04731e+07 0 0.181783 0.994534 0.784979 1.01302e+08 0.00421886 2.22256e+07 9.79332e+06 2.24644e+07 300 2.24419e+07 1.55995e+07 0.00327167 2.23949e+07 49.9476 0.00487411 0.996075 0 50.2672 GTEX-1H3VY-2326-SM-9WG81 1 B1 6 pieces; mucosa and muscularis 6.8 Stomach Stomach 0000945 510 1316 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.987154 179983 0.975652 0.990077 0.811967 23783 1 76 0.00247876 291 0 8.64403e+07 0.0239263 603697 8.73067e+07 6.55533e+06 23808 4.29898e+07 0 0.163685 0.990077 0.80391 8.64403e+07 0.00392275 1.95706e+07 5.91681e+07 1.97572e+07 236 1.98223e+07 1.88229e+07 0.00319862 1.97515e+07 49.9107 0.00691467 0.993 0 50.2372 GTEX-1H3VY-2426-SM-9WPPD 1 B1 6 pieces; full thickness sections 7.6 Colon Colon - Transverse 0001157 522 1304 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987665 219103 0.976806 0.989351 0.831906 23292 1 76 0.00608984 164 0 7.35208e+07 0.0227916 924452 7.43121e+07 1.15138e+07 23313 3.6605e+07 0 0.144901 0.989351 0.823047 7.35208e+07 0.00659707 1.63834e+07 9.3201e+06 1.64532e+07 170 1.64351e+07 1.16265e+07 0.00634303 1.651e+07 50.1137 0.0124401 0.991038 0 50.1063 GTEX-1H3VY-2526-SM-9KNW1 1 B1 6 pieces; target muscularis 7.8 Colon Colon - Sigmoid 0001159 528 1298 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6806 05/12/2015 TruSeq.v1 RNASEQ 0.993426 232430 0.973965 0.994367 0.824923 23982 1 76 0.0024018 291 0 1.06309e+08 0.0256953 597024 1.06911e+08 1.243e+07 24013 5.30008e+07 0 0.149042 0.994367 0.820276 1.06309e+08 0.00297359 2.31844e+07 1.00535e+07 2.33613e+07 293 2.33691e+07 1.8868e+07 0.00268743 2.32712e+07 49.8951 0.00558432 0.995308 0 50.19 GTEX-1H3VY-2726-SM-A96TL 2 B1 2 pieces; fibromuscular stroma and glands with predominantly sloughed epithelium 7.1 Prostate Prostate 0002367 535 1291 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992163 249086 0.967072 0.993534 0.776158 24228 1 76 0.00200361 174 0 7.56897e+07 0.0326468 326597 7.61823e+07 2.66575e+06 24260 3.77146e+07 0 0.190914 0.993534 0.771139 7.56897e+07 0.00243808 1.65753e+07 7.18333e+06 1.67413e+07 180 1.67326e+07 1.27235e+07 0.00222055 1.66839e+07 49.9271 0.00428704 0.994905 0 50.2491 GTEX-1H3VY-5004-SM-AN46M B1 Muscle Muscle - Skeletal 0011907 433 ChIP-Seq GTEX-1H3VY-5007-SM-AN46L B1 Heart Heart - Left Ventricle 0006566 466 ChIP-Seq GTEX-1H4P4-0001-SM-AG5Y5 B1 Blood Whole Blood 0013756 1085 BP-57563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/27/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1H4P4-0006-SM-AHZ24 B1 6.8 Blood Whole Blood 0013756 1085 BP-57562 RNA isolation_PAXgene Blood RNA (Manual) 10/27/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.95566 464804 0.980716 0.957058 0.793674 19945 1 76 0.00666292 157 0 1.2781e+08 0.0166716 377886 1.33544e+08 2.29172e+07 19960 6.34924e+07 0 0.187042 0.957058 0.759592 1.2781e+08 0.00906495 3.00008e+07 2.00438e+08 3.02409e+07 182 3.01939e+07 3.32986e+07 0.00786218 3.02622e+07 50.0564 0.00282966 0.958456 0 50.1993 GTEX-1H4P4-0011-R10b-SM-CE6SG B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 1076 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988019 583839 0.959625 0.990005 0.846562 21761 1 76 0.00810832 132 0 6.02295e+07 0.0402072 4.66385e+06 6.08376e+07 9.73738e+06 21770 2.99434e+07 0 0.113063 0.990005 0.838101 6.02295e+07 0.00767407 1.29984e+07 1.43893e+07 1.34449e+07 160 1.33219e+07 4.70783e+06 0.00789163 1.32162e+07 49.801 0.0766606 0.991992 0 50.8443 GTEX-1H4P4-0011-R11b-SM-CE6S8 B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 1076 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988073 679449 0.944256 0.989601 0.760445 22021 1 76 0.00811942 127 0 6.82249e+07 0.0554826 2.1547e+06 6.89418e+07 1.09088e+07 22042 3.39132e+07 0 0.183811 0.989601 0.752537 6.82249e+07 0.0074312 1.46018e+07 1.61892e+07 1.48473e+07 150 1.49034e+07 6.54949e+06 0.00777584 1.46417e+07 49.5571 0.0312539 0.991129 0 50.4169 GTEX-1H4P4-0011-R1b-SM-CL54V B1, A1 5.7 Brain Brain - Hippocampus 0001954 1076 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99346 880600 0.955692 0.995114 0.834948 21389 1 76 0.00278902 377 0 1.09685e+08 0.04418 1.54618e+07 1.10223e+08 1.35166e+07 21400 5.46453e+07 0 0.120744 0.995114 0.830869 1.09685e+08 0.00425566 2.33617e+07 4.84827e+07 2.46716e+07 380 2.43451e+07 6.22299e+06 0.00352112 2.38179e+07 49.4527 0.140277 0.996768 0 51.3636 GTEX-1H4P4-0011-R6a-SM-ARZLR B1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1076 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.979594 1.12843e+06 0.952395 0.982645 0.77425 20830 1 76 0.00272627 202 0 7.65233e+07 0.047484 8.41684e+06 7.78749e+07 2.97027e+06 20839 3.79293e+07 0 0.178145 0.982645 0.760812 7.65233e+07 0.00392205 1.55413e+07 7.05677e+07 1.63616e+07 252 1.61412e+07 4.81199e+06 0.0033223 1.593e+07 49.6707 0.108082 0.985696 0 51.2856 GTEX-1H4P4-0011-R7b-SM-ARU77 B1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1076 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992722 425941 0.97138 0.9942 0.84326 19498 1 76 0.00235917 263 0 7.67196e+07 0.0285566 9.52702e+06 7.71671e+07 2.47502e+06 19505 3.82347e+07 0 0.12812 0.9942 0.83837 7.67196e+07 0.0030562 1.63921e+07 3.4851e+07 1.72269e+07 322 1.68985e+07 3.06749e+06 0.00270717 1.67899e+07 49.8389 0.12346 0.995679 0 51.2416 GTEX-1H4P4-0226-SM-9YFKT 1 B1 2 pieces; large central defects (? poor fixation), smaller piece includes ~10-20% fibrous tissue 6 Adipose Tissue Adipose - Subcutaneous 0002190 1285 1342 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536,LCSET-7766 08/22/2015 TruSeq.v1 RNASEQ 0.992577 222069 0.974091 0.994005 0.796886 22551 1 76 0.00266008 160 0 7.03252e+07 0.0255972 462576 7.07494e+07 4.34458e+06 22575 3.50369e+07 0 0.177204 0.994005 0.792109 7.03252e+07 0.00344454 1.54434e+07 6.69979e+06 1.55924e+07 173 1.55892e+07 1.08652e+07 0.00305175 1.55437e+07 49.9269 0.00653824 0.995433 0 50.24 GTEX-1H4P4-0326-SM-9WYTD 1 B1 2 pieces; lobulated adipose tissue, small central defects 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1287 1340 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991718 274245 0.972149 0.993508 0.797354 24655 1 76 0.00271864 207 0 8.9395e+07 0.027535 597456 8.99792e+07 6.58778e+06 24682 4.45096e+07 0 0.174795 0.993508 0.792178 8.9395e+07 0.00450397 1.95941e+07 9.8134e+06 1.98799e+07 247 1.98926e+07 1.35896e+07 0.0036097 1.97375e+07 49.8042 0.00663994 0.995298 0 50.362 GTEX-1H4P4-0626-SM-9YFKZ 1 B1 2 pieces; fragmented sections, small component of internal fat/vessels 7.7 Muscle Muscle - Skeletal 0011907 1294 1333 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7536,LCSET-7768 08/26/2015 TruSeq.v1 RNASEQ 0.993078 366575 0.988158 0.99552 0.906962 20065 1 76 0.00236852 374 0 1.60278e+08 0.0116407 2.69728e+06 1.60999e+08 1.3089e+07 20074 7.98445e+07 0 0.0811968 0.99552 0.902899 1.60278e+08 0.00323673 3.61326e+07 1.95685e+07 3.64474e+07 380 3.66061e+07 3.32881e+07 0.00280156 3.63289e+07 49.81 0.0167534 0.997962 0 50.2169 GTEX-1H4P4-0726-SM-9YFLR 1 B1 6 pieces; include up to 10% internal/external fat, epidermis measures 45 microns, some sections fragmented 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1294 1333 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993221 315760 0.976162 0.994497 0.825837 23678 1 76 0.00247526 397 0 1.18652e+08 0.0234538 466342 1.19309e+08 4.12864e+06 23711 5.91272e+07 0 0.150325 0.994497 0.821292 1.18652e+08 0.00368919 2.57947e+07 1.26013e+07 2.59924e+07 378 2.60015e+07 2.15167e+07 0.00308144 2.59349e+07 49.9359 0.0039087 0.995772 0 50.1909 GTEX-1H4P4-0826-SM-9WYUK 2 B1 2 pieces; one includes attached portion of vein/fat; mild, focal plaque 6.2 Blood Vessel Artery - Tibial 0007610 1299 1328 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994119 84527 0.974537 0.995119 0.824364 21446 1 76 0.00256293 124 0 5.55313e+07 0.0251518 705139 5.58037e+07 4.07631e+06 21464 2.76664e+07 0 0.150173 0.995119 0.82034 5.55313e+07 0.00424305 1.21181e+07 4.70458e+06 1.22434e+07 141 1.22046e+07 8.79922e+06 0.00340215 1.22119e+07 50.0149 0.0126361 0.996118 0 50.2574 GTEX-1H4P4-1026-SM-9YFKP 1 B1 2 pieces; 1 is 30% fat, 2nd is ~90% fat/vessels 6.4 Nerve Nerve - Tibial 0001323 1303 1324 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7768 08/26/2015 TruSeq.v1 RNASEQ 0.989304 368890 0.961532 0.992312 0.719284 27041 1 76 0.00266948 389 0 1.61666e+08 0.0381896 816442 1.62919e+08 1.32116e+07 27119 8.03778e+07 0 0.242248 0.992312 0.713753 1.61666e+08 0.00384858 3.53012e+07 1.53965e+07 3.54873e+07 424 3.55691e+07 2.07856e+07 0.00325724 3.56726e+07 50.0727 0.00501135 0.995319 0 50.1314 GTEX-1H4P4-1926-SM-9WPOO 2 B1 2 pieces; spermatogenesis is present 6.3 Testis Testis 0000473 1333 1294 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986732 267675 0.920942 0.988432 0.71451 32989 1 76 0.0064461 140 0 7.32224e+07 0.0787118 565665 7.40794e+07 1.14262e+07 33043 3.64563e+07 0 0.206433 0.988432 0.706244 7.32224e+07 0.00695091 1.49348e+07 1.10739e+07 1.50254e+07 126 1.50873e+07 1.19133e+07 0.00669807 1.49787e+07 49.8194 0.00763593 0.990131 0 50.1512 GTEX-1H4P4-2026-SM-9WPNV 1 B1 1 piece; well preserved, 60% salivary gland elements, 40% lip/fat 7.2 Salivary Gland Minor Salivary Gland 0006330 1339 1288 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986702 193946 0.969346 0.988388 0.766136 24939 1 76 0.00668573 172 0 7.96861e+07 0.0294689 491973 8.06223e+07 1.24853e+07 24974 3.96364e+07 0 0.20321 0.988388 0.757239 7.96861e+07 0.00725196 1.78392e+07 1.42546e+07 1.79712e+07 167 1.8021e+07 1.12519e+07 0.00696836 1.79163e+07 49.8543 0.0061022 0.990074 0 50.1843 GTEX-1H4P4-2126-SM-9WYSL 1 B1 6 pieces; largely disrupted sections, some residual fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1335 1292 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993046 144741 0.975624 0.994525 0.754387 23997 1 76 0.0026191 221 0 9.07116e+07 0.0241327 346753 9.1211e+07 6.38501e+06 24034 4.5193e+07 0 0.221237 0.994525 0.750257 9.07116e+07 0.00432327 1.99172e+07 9.44742e+06 2.00999e+07 225 2.01123e+07 1.42756e+07 0.00346992 2.00353e+07 49.9041 0.00380166 0.996004 0 50.2283 GTEX-1H4P4-2226-SM-9MQKQ 1 B1 2 pieces; predominantly fat with scattered fibrous tissue and nerve, no ductal elements in this section 6.1 Breast Breast - Mammary Tissue 0008367 1341 1286 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6807 05/19/2015 TruSeq.v1 RNASEQ 0.984377 235541 0.975408 0.986618 0.791597 24865 1 76 0.00577694 129 0 6.32898e+07 0.0242877 375757 6.41482e+07 7.74384e+06 24888 3.14807e+07 0 0.183811 0.986618 0.781003 6.32898e+07 0.00742003 1.38712e+07 6.99729e+06 1.41085e+07 139 1.41229e+07 9.91054e+06 0.00659662 1.39926e+07 49.7683 0.00585764 0.988859 0 50.424 GTEX-1H4P4-2626-SM-9WPON 2 B1 1 piece; adenohypophysis 6 Pituitary Pituitary 0000007 1415 1212 BP-62478 RNA Extraction from Paxgene-derived Lysate Plate Based 04/10/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98663 236576 0.963408 0.988516 0.765426 25692 1 76 0.00660334 135 0 7.48774e+07 0.036356 692212 7.57472e+07 1.23172e+07 25723 3.72672e+07 0 0.197982 0.988516 0.756636 7.48774e+07 0.00722817 1.58878e+07 8.82069e+06 1.60783e+07 153 1.60887e+07 1.03269e+07 0.00691516 1.60082e+07 49.8746 0.00913845 0.990403 0 50.2981 GTEX-1H4P4-2726-SM-9JGGB 1 B1 2 pieces; Purkinje cells well visualized 6.9 Brain Brain - Cerebellum 0002037 1423 1204 BP-59456 RNA Extraction from Paxgene-derived Lysate Plate Based 01/09/2015 LCSET-6805 04/27/2015 TruSeq.v1 RNASEQ 0.993112 433070 0.944329 0.99438 0.730397 24593 1 76 0.00226881 269 0 1.09374e+08 0.055331 2.29976e+06 1.09992e+08 5.62192e+06 24633 5.45044e+07 0 0.213932 0.99438 0.726292 1.09374e+08 0.00315253 2.34879e+07 2.29393e+07 2.38613e+07 315 2.3855e+07 1.15546e+07 0.00271011 2.36146e+07 49.7467 0.0209084 0.995648 0 50.3943 GTEX-1HB9E-0004-SM-AG5YT B1 Blood Whole Blood 0013756 537 BP-57698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/31/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HB9E-0006-SM-ARU6M B1 7.2 Blood Whole Blood 0013756 537 BP-57700 RNA isolation_PAXgene Blood RNA (Manual) 10/31/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.97843 457735 0.977308 0.979907 0.782892 18286 1 76 0.0023879 101 0 6.78784e+07 0.0216245 168491 6.92702e+07 2.14578e+06 18295 3.37424e+07 0 0.194416 0.979907 0.767161 6.78784e+07 0.00351608 1.57449e+07 7.78735e+07 1.58069e+07 115 1.58829e+07 1.72896e+07 0.00295114 1.57826e+07 49.8417 0.00243237 0.981384 0 50.0983 GTEX-1HB9E-0011-R10a-SM-CJI3H B1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 547 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993159 1.22662e+06 0.954147 0.994545 0.832857 24063 1 76 0.00197151 373 0 9.44886e+07 0.0455276 3.74074e+06 9.50069e+07 5.86339e+06 24084 4.70485e+07 0 0.12129 0.994545 0.828314 9.44886e+07 0.00239378 2.03831e+07 2.35332e+07 2.08598e+07 345 2.08865e+07 1.16954e+07 0.00218235 2.04754e+07 49.5031 0.0393733 0.99593 0 50.5779 GTEX-1HB9E-0011-R11b-SM-ARU79 B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 547 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990887 621045 0.956853 0.992246 0.746221 24205 1 76 0.0023127 285 0 1.00171e+08 0.0426263 856218 1.00953e+08 3.49672e+06 24237 4.98496e+07 0 0.210631 0.992246 0.740435 1.00171e+08 0.00285768 2.21651e+07 3.39467e+07 2.21072e+07 288 2.23293e+07 1.33589e+07 0.00258482 2.20676e+07 49.7053 0.00848132 0.993604 0 49.9346 GTEX-1HB9E-0011-R2b-SM-A96RW B1, A1 6.8 Brain Brain - Substantia nigra 0002038 547 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993366 275642 0.972449 0.99448 0.845971 23742 1 76 0.00188987 275 0 8.88497e+07 0.0271722 3.93982e+06 8.93429e+07 2.712e+06 23761 4.42907e+07 0 0.126477 0.99448 0.841301 8.88497e+07 0.00205121 1.98131e+07 1.15683e+07 2.00116e+07 286 1.99748e+07 1.2361e+07 0.00197045 1.99427e+07 49.9598 0.0440978 0.995593 0 50.2492 GTEX-1HB9E-0011-R3a-SM-ARL7D B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 547 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992632 750031 0.962769 0.992814 0.836604 22106 1 76 0.00166906 137 0 5.44541e+07 0.0368046 2.50377e+06 5.48482e+07 3.46003e+06 22122 2.70679e+07 0 0.126165 0.992814 0.830592 5.44541e+07 0.00218685 1.20193e+07 1.1297e+07 1.20662e+07 150 1.22412e+07 7.86150e+06 0.00192791 1.18576e+07 49.2042 0.0456491 0.992995 0 50.0972 GTEX-1HB9E-0011-R4b-SM-ARZLS B1, A1 6.5 Brain Brain - Amygdala 0001876 547 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988071 1.28983e+06 0.954756 0.990611 0.806432 23176 1 76 0.00238864 160 0 7.03404e+07 0.0448258 4.23829e+06 7.10071e+07 2.90827e+06 23198 3.48837e+07 0 0.148324 0.990611 0.79886 7.03404e+07 0.00342814 1.51966e+07 2.58276e+07 1.54856e+07 182 1.57316e+07 9.78057e+06 0.00290705 1.51124e+07 48.9964 0.0596882 0.99315 0 50.4709 GTEX-1HB9E-0011-R5b-SM-ARU78 B1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 547 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992651 629172 0.963498 0.993914 0.827766 24253 1 76 0.00202285 270 0 8.23268e+07 0.0360628 2.80363e+06 8.28309e+07 2.96389e+06 24275 4.10049e+07 0 0.135732 0.993914 0.822728 8.23268e+07 0.00256405 1.81472e+07 1.42753e+07 1.8262e+07 267 1.83453e+07 1.13158e+07 0.00229311 1.81612e+07 49.7478 0.0338476 0.995177 0 50.1577 GTEX-1HB9E-0011-R6b-SM-A9G1P B1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 547 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983522 346770 0.964472 0.99005 0.832218 24742 1 76 0.00373403 271 0 9.09121e+07 0.0350401 3.22080e+06 9.18258e+07 8.64383e+06 24763 4.50571e+07 0 0.132254 0.99005 0.823937 9.09121e+07 0.00400366 1.98578e+07 1.44613e+07 2.01273e+07 266 2.03535e+07 1.29323e+07 0.0038662 2.01676e+07 49.7706 0.0350752 0.996578 0 50.337 GTEX-1HB9E-0011-R7b-SM-A9G1Q B1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 547 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987369 720646 0.949001 0.991841 0.791332 24505 1 76 0.00388135 202 0 8.55184e+07 0.0506615 3.51388e+06 8.62219e+07 7.91734e+06 24527 4.2477e+07 0 0.157668 0.991841 0.784876 8.55184e+07 0.00358983 1.84025e+07 2.92463e+07 1.87194e+07 253 1.88035e+07 9.76707e+06 0.00373814 1.86657e+07 49.8162 0.0407539 0.996313 0 50.4267 GTEX-1HB9E-0011-R8b-SM-A9G1O B1, A1 7.5 Brain Brain - Hypothalamus 0001898 547 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846,LCSET-8171 11/17/2015 TruSeq.v1 RNASEQ 0.986782 558270 0.954755 0.991939 0.828004 25630 1 76 0.00227721 375 0 1.10561e+08 0.0447709 3.15561e+06 1.1146e+08 6.87799e+06 25657 5.48818e+07 0 0.126751 0.991939 0.821329 1.10561e+08 0.00275531 2.40422e+07 2.24519e+07 2.43488e+07 332 2.45156e+07 1.4775e+07 0.0025141 2.44014e+07 49.8832 0.0283117 0.997096 0 50.3169 GTEX-1HB9E-0126-SM-CM2S5 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~25-36 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 544 833 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992378 352034 0.971331 0.99378 0.772561 23867 1 76 0.00206797 280 0 9.52479e+07 0.0284602 840630 9.5844e+07 6.1638e+06 23903 4.74275e+07 0 0.19877 0.99378 0.767756 9.52479e+07 0.0028516 2.08476e+07 9.80433e+06 2.09554e+07 261 2.09949e+07 1.46006e+07 0.00245923 2.09382e+07 49.9323 0.00877081 0.995183 0 50.1289 GTEX-1HB9E-0226-SM-E9U4R 0 B1 6 pieces; no significant dermal fat; squamous epithelium is ~50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 561 816 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989962 382719 0.973606 0.990968 0.79063 23854 1 76 0.00181111 192 0 8.06701e+07 0.0261279 283257 8.14054e+07 3.01409e+06 23881 4.02061e+07 0 0.182976 0.990968 0.783489 8.06701e+07 0.00269526 1.76913e+07 8.24018e+06 1.77889e+07 183 1.77893e+07 1.55336e+07 0.00225274 1.77665e+07 49.968 0.00347958 0.991973 0 50.1375 GTEX-1HB9E-0326-SM-D3LA5 0 B1 2 pieces, interstitial fat/vascular elements are ~35% of tissue (rep delineated) 8.3 Muscle Muscle - Skeletal 0011907 572 805 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.99241 318286 0.983318 0.994695 0.872936 20841 1 76 0.00211464 275 0 9.97905e+07 0.0164359 1.90198e+06 1.00323e+08 9.45376e+06 20858 4.9697e+07 0 0.110383 0.994695 0.868305 9.97905e+07 0.00341806 2.18897e+07 1.22952e+07 2.2121e+07 313 2.21324e+07 1.93648e+07 0.00276486 2.20803e+07 49.9411 0.0189586 0.996981 0 50.2627 GTEX-1HB9E-0426-SM-CNPPV 0 B1 2 pieces, fascia/vascular elements are ~10-15% of tissue 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 573 804 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986518 290647 0.978212 0.989411 0.828342 23351 1 76 0.00559134 167 0 8.48083e+07 0.0214921 477959 8.57159e+07 2.16851e+07 23374 4.21748e+07 0 0.14987 0.989411 0.819571 8.48083e+07 0.00803916 1.85366e+07 9.15056e+06 1.87519e+07 179 1.87945e+07 1.57365e+07 0.00681167 1.87274e+07 49.9105 0.00557608 0.992304 0 50.2886 GTEX-1HB9E-0526-SM-ARZNM 0 B1 2 pieces, fascia/vascular elements are ~5-10% of tissue 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 575 802 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988785 675104 0.979395 0.990941 0.771397 22447 1 76 0.00250222 130 0 6.38296e+07 0.0200633 254245 6.44131e+07 2.77838e+06 22471 3.16623e+07 0 0.207998 0.990941 0.764409 6.38296e+07 0.00372134 1.41281e+07 6.89302e+06 1.43431e+07 133 1.46376e+07 1.23272e+07 0.00311045 1.39649e+07 48.824 0.0039471 0.993097 0 50.3775 GTEX-1HB9E-0626-SM-AHZ4K 1 B1 2 pieces, moderate fibrosis, cardiac congestion and chronic hepatitis 6 Liver Liver 0001114 575 802 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988886 305686 0.976401 0.990487 0.799764 22559 1 76 0.00693748 159 0 8.93668e+07 0.0232029 2.20116e+06 9.02251e+07 1.62249e+07 22579 4.44583e+07 0 0.176637 0.990487 0.792155 8.93668e+07 0.00906907 1.94409e+07 1.72239e+07 1.96851e+07 187 1.96714e+07 1.34393e+07 0.00800155 1.95859e+07 49.891 0.0243963 0.992088 0 50.3121 GTEX-1HB9E-0726-SM-AHZ4L 1 B1 2 pieces, chronic interstitial pneumonitis with fibrosis and hyaline membrane formation, chronic injury pattern 6.9 Lung Lung 0008952 577 800 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.987607 253247 0.972857 0.9893 0.729198 23195 1 76 0.00580121 127 0 6.98357e+07 0.0267352 460347 7.0591e+07 1.04599e+07 23223 3.4706e+07 0 0.243659 0.9893 0.721396 6.98357e+07 0.00765491 1.54452e+07 6.21797e+06 1.55456e+07 142 1.55501e+07 9.99762e+06 0.00672647 1.55547e+07 50.0075 0.00652133 0.990994 0 50.1619 GTEX-1HB9E-0826-SM-CNNQJ 1 B1 2 pieces, mild goitrous changes 6.8 Thyroid Thyroid 0002046 592 785 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991309 167224 0.975362 0.993284 0.805804 23001 1 76 0.00233677 149 0 7.10759e+07 0.0243174 335225 7.15565e+07 7.45892e+06 23026 3.53809e+07 0 0.169558 0.993284 0.800392 7.10759e+07 0.00379471 1.56508e+07 7.39812e+06 1.57635e+07 163 1.57777e+07 1.31622e+07 0.00306429 1.5777e+07 49.9989 0.00468476 0.995258 0 50.1794 GTEX-1HB9E-0926-SM-COH3D 1 B1 6 pieces, atherosis up to ~0.5mm 7.3 Blood Vessel Artery - Aorta 0001496 594 783 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992907 226980 0.979199 0.993988 0.800671 22175 1 76 0.00348803 153 0 7.58947e+07 0.0204204 199155 7.63537e+07 7.36773e+06 22198 3.78025e+07 0 0.178528 0.993988 0.795857 7.58947e+07 0.004184 1.64877e+07 6.1611e+06 1.65111e+07 167 1.64999e+07 1.36994e+07 0.00383563 1.65846e+07 50.128 0.00260832 0.995068 0 50.0355 GTEX-1HB9E-1526-SM-D3LA6 1 B1 6 pieces, squamous mucosa up to ~0.5mm, ~20-30% thickness 8 Esophagus Esophagus - Mucosa 0006920 614 763 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991779 365761 0.975336 0.993748 0.777957 22695 1 76 0.0025024 277 0 1.10837e+08 0.0244042 676205 1.11534e+08 1.05699e+07 22725 5.52006e+07 0 0.197379 0.993748 0.773094 1.10837e+08 0.00374189 2.48192e+07 1.44582e+07 2.50286e+07 313 2.50766e+07 1.96802e+07 0.00312092 2.4984e+07 49.9075 0.00606276 0.995717 0 50.21 GTEX-1HB9E-1626-SM-ARL9J 1 B1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 614 763 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991925 564224 0.96984 0.991856 0.764683 21350 1 76 0.00196935 114 0 5.31936e+07 0.0299476 1.16194e+06 5.36303e+07 4.31122e+06 21373 2.64305e+07 0 0.205157 0.991856 0.758455 5.31936e+07 0.00240859 1.15806e+07 5.84621e+06 1.16142e+07 130 1.18412e+07 7.21147e+06 0.00218899 1.13522e+07 48.9457 0.0216657 0.991788 0 50.0726 GTEX-1HB9E-1826-SM-D4P33 3 B1 6 pieces, glomeruli present with mesangial hyalin deposits; advanced tubular autolysis, interstitial fibrosis 6.1 Kidney Kidney - Cortex 0001225 621 756 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993241 269691 0.975546 0.994627 0.803382 25185 1 76 0.00248991 274 0 1.01466e+08 0.0241288 3.36867e+06 1.02014e+08 1.2006e+07 25223 5.05443e+07 0 0.172164 0.994627 0.799065 1.01466e+08 0.00383876 2.25532e+07 1.17883e+07 2.28804e+07 307 2.28343e+07 1.59171e+07 0.00316339 2.27358e+07 49.892 0.0330216 0.996012 0 50.3601 GTEX-1HB9E-1926-SM-D4P34 1 B1 2 pieces, spermatogenesis substantially reduced. 6.4 Testis Testis 0000473 622 755 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991997 370082 0.935631 0.993386 0.711226 34436 1 76 0.0025383 278 0 1.14784e+08 0.0641057 2.63643e+06 1.15549e+08 1.3981e+07 34513 5.7193e+07 0 0.224404 0.993386 0.706523 1.14784e+08 0.00380293 2.42036e+07 1.66054e+07 2.4495e+07 317 2.45359e+07 1.51607e+07 0.00316973 2.43021e+07 49.7606 0.0228166 0.994776 0 50.2991 GTEX-1HB9E-2526-SM-D4P35 1 B1 6 pieces, target muscularis present, ~20% autolyzed mucosa 6.1 Colon Colon - Sigmoid 0001159 642 735 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99255 173376 0.973719 0.993765 0.76338 24399 1 76 0.00263684 213 0 9.06425e+07 0.0259513 2.22963e+06 9.12112e+07 1.09872e+07 24444 4.5147e+07 0 0.210339 0.993765 0.75862 9.06425e+07 0.00362267 1.99554e+07 9.76835e+06 2.03122e+07 234 2.03016e+07 1.21158e+07 0.00312916 2.00784e+07 49.7235 0.0244447 0.99498 0 50.4431 GTEX-1HB9E-2726-SM-D3L91 0 B1 2 pieces, ~2mm nubbin of adherent fat, delineated 7.5 Nerve Nerve - Tibial 0001323 654 723 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991522 262149 0.971353 0.993322 0.768221 24125 1 76 0.00259457 214 0 8.99882e+07 0.0283537 339418 9.05932e+07 9.10859e+06 24161 4.47997e+07 0 0.203132 0.993322 0.76309 8.99882e+07 0.00356916 1.9755e+07 7.62235e+06 1.99137e+07 212 1.99058e+07 1.50341e+07 0.00308099 1.99194e+07 50.0172 0.00374662 0.995121 0 50.2001 GTEX-1HB9E-2826-SM-D3LAQ 0 B1 2 pieces subtotally occlusive calcifying atherosis (delineated); ~!mm nubbin of adherent fibroadipose tissue 7.8 Blood Vessel Artery - Tibial 0007610 656 721 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991862 276627 0.974 0.993756 0.822118 21955 1 76 0.00246781 207 0 8.73373e+07 0.0256291 453886 8.78861e+07 8.71073e+06 21980 4.3481e+07 0 0.151882 0.993756 0.816985 8.73373e+07 0.00341312 1.89294e+07 6.89032e+06 1.90841e+07 207 1.9067e+07 1.67983e+07 0.00293956 1.91038e+07 50.0481 0.00516448 0.99565 0 50.2035 GTEX-1HB9E-2926-SM-D4P3S 1 B1 2 pieces, no abnormalities 6.2 Brain Brain - Cortex 0001870 694 683 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994525 244601 0.970687 0.995789 0.840762 24363 1 76 0.00221805 379 0 1.13599e+08 0.0290254 7.05761e+06 1.1408e+08 1.31142e+07 24388 5.66372e+07 0 0.129925 0.995789 0.837221 1.13599e+08 0.00356322 2.49383e+07 2.2596e+07 2.55859e+07 339 2.53373e+07 1.30837e+07 0.00288978 2.52998e+07 49.9629 0.0618655 0.997052 0 50.6408 GTEX-1HB9E-3026-SM-EV79F 1 B1 1 piece; mainly adenohypophysis; ~3x1mm nubbin of neurohypophysis, delineated 6.5 Pituitary Pituitary 0000007 695 682 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.98937 480894 0.964053 0.990409 0.749985 25689 1 76 0.00242353 272 0 1.00614e+08 0.0357035 936807 1.01588e+08 1.13413e+07 25739 5.01246e+07 0 0.214067 0.990409 0.742792 1.00614e+08 0.0036332 2.2167e+07 1.56863e+07 2.23688e+07 296 2.23703e+07 1.47278e+07 0.00302773 2.22711e+07 49.8889 0.00922162 0.991448 0 50.2265 GTEX-1HB9E-3126-SM-AHZ4M 1 B1 2 pieces, no abnormalities 6.5 Brain Brain - Cerebellum 0002037 697 680 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.99202 694785 0.948006 0.993628 0.749932 25113 1 76 0.00199447 376 0 1.07021e+08 0.0516418 2.40308e+06 1.07708e+08 3.92698e+06 25142 5.328e+07 0 0.198074 0.993628 0.745153 1.07021e+08 0.00286365 2.32856e+07 3.73649e+07 2.36e+07 343 2.36169e+07 1.26089e+07 0.00242836 2.34334e+07 49.805 0.0223111 0.995236 0 50.3352 GTEX-1HBPH-0006-SM-A8N7W C1 7.1 Blood Whole Blood 0013756 858 BP-57753 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.962913 463493 0.972105 0.965912 0.761825 25258 1 76 0.0110908 103 0 8.55236e+07 0.0266142 422436 8.85418e+07 1.60401e+07 25273 4.24125e+07 0 0.21028 0.965912 0.735856 8.55236e+07 0.0124232 1.94081e+07 9.94422e+07 1.95979e+07 124 1.96622e+07 1.76782e+07 0.0117549 1.96139e+07 49.9385 0.00477104 0.968912 0 50.2433 GTEX-1HBPH-0011-R10a-SM-CE6SI C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 870 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989394 538517 0.968493 0.991203 0.856185 23016 1 76 0.00748482 185 0 7.54254e+07 0.0311613 4.26531e+06 7.60948e+07 1.16013e+07 23032 3.75113e+07 0 0.112308 0.991203 0.848653 7.54254e+07 0.00764401 1.65565e+07 1.24486e+07 1.67916e+07 205 1.6799e+07 8.23011e+06 0.00756427 1.66624e+07 49.7959 0.0560525 0.993012 0 50.3525 GTEX-1HBPH-0011-R11b-SM-A8N7U C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 870 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986231 546657 0.948224 0.98838 0.748075 26012 1 76 0.0108124 270 0 1.21058e+08 0.0513981 2.22673e+06 1.22481e+08 2.14885e+07 26053 6.01463e+07 0 0.200149 0.98838 0.739382 1.21058e+08 0.010602 2.59916e+07 1.74173e+07 2.62421e+07 284 2.63517e+07 1.35369e+07 0.0107074 2.61194e+07 49.7787 0.0181802 0.990529 0 50.2398 GTEX-1HBPH-0011-R3a-SM-A96RY C1, A1 7.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 870 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993985 224623 0.96535 0.995307 0.848499 22186 1 76 0.0016305 270 0 6.92269e+07 0.0343929 5.4711e+06 6.95532e+07 2.21253e+06 22199 3.45191e+07 0 0.116852 0.995307 0.844517 6.92269e+07 0.00188406 1.51906e+07 1.46015e+07 1.54683e+07 258 1.53712e+07 6.12658e+06 0.00175711 1.53546e+07 49.973 0.0786605 0.99663 0 50.4528 GTEX-1HBPH-0011-R4a-SM-A96RX C1, A1 6.9 Brain Brain - Amygdala 0001876 870 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993191 498673 0.958227 0.99471 0.83401 22671 1 76 0.0016961 269 0 7.6003e+07 0.0415581 5.87752e+06 7.64072e+07 2.52532e+06 22688 3.78809e+07 0 0.124216 0.99471 0.829599 7.6003e+07 0.00204493 1.64396e+07 2.2722e+07 1.6821e+07 282 1.66307e+07 6.3842e+06 0.00187025 1.67232e+07 50.1387 0.0769236 0.99623 0 50.5733 GTEX-1HBPH-0011-R5b-SM-A9G1R C1, A1 6.2 Brain Brain - Caudate (basal ganglia) 0001873 870 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987381 779674 0.944776 0.991719 0.790807 23206 1 76 0.00381211 267 0 8.555e+07 0.0550794 7.50593e+06 8.62644e+07 8.31656e+06 23226 4.25104e+07 0 0.153969 0.991719 0.784258 8.555e+07 0.00350297 1.79228e+07 4.677e+07 1.84857e+07 288 1.83001e+07 5.01288e+06 0.00366023 1.83845e+07 50.115 0.0870107 0.996057 0 50.773 GTEX-1HBPH-0011-R6a-SM-CKZOV C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 870 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990786 680067 0.959282 0.993574 0.837678 23623 1 76 0.00186008 370 0 8.61643e+07 0.0404817 7.15682e+06 8.67216e+07 8.29563e+06 23641 4.28625e+07 0 0.121604 0.993574 0.832294 8.61643e+07 0.00355895 1.87349e+07 1.93689e+07 1.90502e+07 361 1.90975e+07 8.19056e+06 0.00270713 1.88994e+07 49.7394 0.0825263 0.996362 0 50.4173 GTEX-1HBPH-0011-R8b-SM-CL556 C1, A1 6.9 Brain Brain - Hypothalamus 0001898 870 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991079 814856 0.958407 0.993339 0.819709 25017 1 76 0.00233752 376 0 9.87676e+07 0.0412585 3.38069e+06 9.94299e+07 1.19301e+07 25048 4.91389e+07 0 0.138698 0.993339 0.814248 9.87676e+07 0.00427867 2.16706e+07 1.31469e+07 2.18493e+07 358 2.18325e+07 1.28223e+07 0.00330588 2.18992e+07 50.0762 0.0340008 0.995599 0 50.2053 GTEX-1HBPH-0011-R9a-SM-CMKH3 C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 870 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994565 534717 0.954308 0.995646 0.811058 22910 1 76 0.00210712 224 0 7.96944e+07 0.0453899 1.96944e+06 8.00429e+07 6.09423e+06 22932 3.9712e+07 0 0.14325 0.995646 0.807527 7.96944e+07 0.0026413 1.75532e+07 1.00576e+07 1.78738e+07 233 1.76925e+07 1.08844e+07 0.00237392 1.78199e+07 50.1795 0.0246048 0.996727 0 50.4526 GTEX-1HBPH-0126-SM-CNNQ7 1 C1 2 pieces; no scars or acute lesions 6.7 Heart Heart - Left Ventricle 0006566 915 938 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992645 264489 0.981684 0.994731 0.823056 22399 1 76 0.00213023 267 0 1.11634e+08 0.0181137 4.22818e+06 1.12226e+08 1.18197e+07 22426 5.56104e+07 0 0.158628 0.994731 0.818719 1.11634e+08 0.00344032 2.47876e+07 1.21497e+07 2.51162e+07 327 2.52129e+07 1.63271e+07 0.0027839 2.48982e+07 49.686 0.0376757 0.996817 0 50.3292 GTEX-1HBPH-0226-SM-9WYSM 1 C1 2 pieces; 20% internal fat 7.3 Heart Heart - Atrial Appendage 0006631 916 938 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994454 172143 0.979592 0.995457 0.785229 22075 1 76 0.00221675 268 0 9.61332e+07 0.0201143 2.31173e+06 9.6572e+07 6.13427e+06 22102 4.79358e+07 0 0.194363 0.995457 0.781662 9.61332e+07 0.00383426 2.08466e+07 1.15667e+07 2.09505e+07 269 2.09436e+07 1.42672e+07 0.00302469 2.0931e+07 49.9849 0.0239379 0.996459 0 50.1243 GTEX-1HBPH-0326-SM-CM2S8 1 C1 2 pieces; moderate atheromatous plaques, but widely patent lumen; up to 0.4mm external fat 7 Blood Vessel Artery - Coronary 0001621 919 935 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992092 494668 0.968419 0.99332 0.745428 23540 1 76 0.00230461 189 0 9.03599e+07 0.0312217 213268 9.09675e+07 5.76315e+06 23583 4.49558e+07 0 0.222991 0.99332 0.740449 9.03599e+07 0.00299423 1.94527e+07 6.88002e+06 1.9512e+07 204 1.95361e+07 1.44835e+07 0.00264899 1.95369e+07 50.001 0.00234444 0.994548 0 50.0761 GTEX-1HBPH-0426-SM-B2LW5 1 C1 6 pieces; well trimmed; 5-10% dermal fat 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 990 864 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.98994 489871 0.972945 0.991766 0.714792 23990 1 76 0.00263802 133 0 6.4897e+07 0.0267333 310299 6.54358e+07 3.12569e+06 24018 3.22581e+07 0 0.258153 0.991766 0.708906 6.4897e+07 0.00398015 1.4371e+07 5.24208e+06 1.44027e+07 139 1.44411e+07 1.01731e+07 0.00330785 1.44488e+07 50.0134 0.00474204 0.993592 0 50.0551 GTEX-1HBPH-0526-SM-9YFMN 1 C1 2 pieces; 15% nerve and vascular content 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 992 863 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992934 280582 0.977045 0.994287 0.774746 23386 1 76 0.0025672 176 0 8.66008e+07 0.0225551 359640 8.70984e+07 3.14305e+06 23416 4.31397e+07 0 0.202299 0.994287 0.77032 8.66008e+07 0.00373261 1.91943e+07 8.78706e+06 1.93304e+07 197 1.93692e+07 1.60922e+07 0.00314911 1.92717e+07 49.8738 0.00412912 0.99564 0 50.1767 GTEX-1HBPH-0626-SM-9YFMK 1 C1 2 pieces; 10 & 20% internal & external fat 6.5 Nerve Nerve - Tibial 0001323 1002 853 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.991544 280023 0.965435 0.993079 0.68251 25099 1 76 0.00272748 176 0 8.87515e+07 0.0342546 248898 8.937e+07 3.37479e+06 25155 4.41867e+07 0 0.282926 0.993079 0.677786 8.87515e+07 0.00381693 1.94993e+07 7.88013e+06 1.961e+07 187 1.96466e+07 1.24304e+07 0.00327136 1.95938e+07 49.9327 0.00278503 0.994615 0 50.1415 GTEX-1HBPH-0726-SM-ARZNA 1 C1 2 pieces; minimal plaque; well dissected, no fat 7.7 Blood Vessel Artery - Tibial 0007610 1004 852 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986983 875250 0.970743 0.988924 0.751404 21453 1 76 0.00264969 124 0 6.30082e+07 0.0288633 232700 6.37138e+07 2.86117e+06 21485 3.12187e+07 0 0.219339 0.988924 0.743082 6.30082e+07 0.00400054 1.35319e+07 5.75437e+06 1.36812e+07 130 1.40116e+07 1.10578e+07 0.00332379 1.33155e+07 48.7264 0.00365227 0.990866 0 50.2743 GTEX-1HBPH-0826-SM-ARZNB 1 C1 2 pieces; moderate focal atrophy 7.5 Muscle Muscle - Skeletal 0011907 1006 850 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989952 888331 0.979716 0.991766 0.849717 19701 1 76 0.00210016 125 0 7.0198e+07 0.0200673 1.05624e+06 7.07808e+07 3.00532e+06 19710 3.48242e+07 0 0.129999 0.991766 0.842721 7.0198e+07 0.00342302 1.51629e+07 7.89088e+06 1.5306e+07 146 1.56992e+07 1.55811e+07 0.00276038 1.48784e+07 48.6579 0.0149227 0.99358 0 50.2349 GTEX-1HBPH-0926-SM-A9SME 1 C1 2 pieces; <5% extraneous vessels 6.7 Thyroid Thyroid 0002046 1020 837 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.991264 419628 0.96837 0.992743 0.731041 24875 1 76 0.00449083 170 0 9.67118e+07 0.0313047 375026 9.74189e+07 1.32066e+07 24921 4.8151e+07 0 0.237328 0.992743 0.725736 9.67118e+07 0.00571757 2.12693e+07 9.5397e+06 2.13016e+07 195 2.13406e+07 1.49217e+07 0.00510329 2.13671e+07 50.031 0.00384962 0.994221 0 50.038 GTEX-1HBPH-1026-SM-ADEIU 1 C1 6 pieces; foci of adventitial hemorrhage; minimal plaque 7.3 Blood Vessel Artery - Aorta 0001496 1022 835 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981125 451259 0.969134 0.987748 0.751056 23638 1 76 0.00344295 276 0 1.04526e+08 0.0304312 161369 1.05822e+08 9.78313e+06 23672 5.17406e+07 0 0.218078 0.987748 0.741854 1.04526e+08 0.00374212 2.23743e+07 9.46403e+06 2.25223e+07 267 2.28021e+07 1.76007e+07 0.00359153 2.27111e+07 49.9 0.0015249 0.994371 0 50.1649 GTEX-1HBPH-1126-SM-A96TU 1 C1 6 pieces; well dissected; slight epithelial sloughing 6.6 Esophagus Esophagus - Mucosa 0006920 1026 832 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993392 222604 0.974402 0.99462 0.803846 21795 1 76 0.0019483 197 0 7.91745e+07 0.0253836 668021 7.96028e+07 2.76294e+06 21809 3.94704e+07 0 0.170556 0.99462 0.799521 7.91745e+07 0.00230275 1.77645e+07 8.17788e+06 1.79426e+07 251 1.79434e+07 1.09115e+07 0.0021253 1.78549e+07 49.8764 0.00839192 0.995847 0 50.2494 GTEX-1HBPH-1226-SM-9WPNW 1 C1 6 pieces; well dissected 7.1 Esophagus Esophagus - Muscularis 0004648 1027 831 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986632 213948 0.973368 0.988422 0.777809 22737 1 76 0.00639528 119 0 6.75164e+07 0.0263912 787421 6.83073e+07 1.05786e+07 22759 3.36077e+07 0 0.195559 0.988422 0.768804 6.75164e+07 0.00715195 1.45898e+07 6.10007e+06 1.47494e+07 137 1.4753e+07 1.02065e+07 0.00677293 1.46992e+07 49.9086 0.0115276 0.990213 0 50.2719 GTEX-1HBPH-1326-SM-9WYSN 1 C1 2 pieces; patchy pulmonary edema 6.5 Lung Lung 0008952 1028 831 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992351 198166 0.9728 0.993761 0.750804 24571 1 76 0.00293261 204 0 8.75861e+07 0.0266392 317459 8.81359e+07 6.28481e+06 24606 4.36028e+07 0 0.221996 0.993761 0.74612 8.75861e+07 0.0047245 1.92583e+07 8.77926e+06 1.94192e+07 209 1.94296e+07 1.3025e+07 0.00382728 1.9369e+07 49.9218 0.00360192 0.995171 0 50.208 GTEX-1HBPH-1526-SM-ARZNC 1 C1 6 pieces; 20-30% submucosal fibrous & fatty 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 1031 829 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136,LCSET-8681 02/23/2016 TruSeq.v1 RNASEQ 0.987913 1.50677e+06 0.970606 0.989283 0.755027 24569 1 76 0.00236938 375 0 1.30321e+08 0.0291342 1.61761e+06 1.31733e+08 9.27339e+06 24629 6.46188e+07 0 0.215579 0.989283 0.746935 1.30321e+08 0.00344716 2.80507e+07 1.70206e+07 2.85247e+07 370 2.91476e+07 1.75507e+07 0.00290753 2.75839e+07 48.6219 0.0122795 0.990654 0 50.4189 GTEX-1HBPH-2026-SM-CMKGL 1 C1 6 pieces; 10% dermal fat; well trimmed 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1040 823 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9116 07/18/2016 TruSeq.v1 EXCLUDE 0.993614 331279 0.973922 0.994544 0.728736 24716 1 76 0.00233518 173 0 8.70925e+07 0.0257087 476866 8.75703e+07 6.8694e+06 24765 4.33834e+07 0 0.245186 0.994544 0.724759 8.70925e+07 0.00281165 1.92914e+07 8.25113e+06 1.93808e+07 190 1.94149e+07 1.39051e+07 0.00257319 1.9341e+07 49.9047 0.00544552 0.995473 0 50.1156 GTEX-1HBPH-2226-SM-9WYSO 1 C1 2 pieces; lobulated fat with 5% fibrous content 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1042 822 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993547 212364 0.974978 0.994757 0.763741 24669 1 76 0.00254823 276 0 9.75079e+07 0.0246566 494977 9.80218e+07 6.36421e+06 24711 4.85802e+07 0 0.211237 0.994757 0.759737 9.75079e+07 0.00441737 2.14955e+07 1.09489e+07 2.16835e+07 277 2.16913e+07 1.52159e+07 0.00348166 2.1601e+07 49.8957 0.00504966 0.995968 0 50.2177 GTEX-1HBPH-2526-SM-ACKXK 2 C1 6 pieces; well dissected; probable Lewy bodies (arrowed) in ganglion cells 6.2 Colon Colon - Sigmoid 0001159 1048 818 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.990798 174950 0.971112 0.9924 0.79636 22917 1 76 0.00287747 162 0 7.35764e+07 0.0286504 1.44703e+06 7.41398e+07 1.01954e+07 22945 3.66264e+07 0 0.174752 0.9924 0.790307 7.35764e+07 0.00385749 1.59128e+07 6.93335e+06 1.61014e+07 186 1.60724e+07 1.02948e+07 0.00336669 1.60615e+07 49.983 0.0195175 0.994002 0 50.2946 GTEX-1HBPH-2626-SM-A96TV 1 C1 2 pieces; no active or chronic lesions 6.6 Liver Liver 0001114 1050 817 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993673 241888 0.975323 0.995157 0.796226 21254 1 76 0.00183659 265 0 8.31021e+07 0.0245262 1.14306e+06 8.35065e+07 2.64085e+06 21277 4.14227e+07 0 0.179097 0.995157 0.79237 8.31021e+07 0.00224374 1.82285e+07 1.16918e+07 1.84795e+07 262 1.84464e+07 1.10118e+07 0.00203986 1.83702e+07 49.8966 0.0136883 0.996642 0 50.3419 GTEX-1HBPH-2726-SM-A96TW 1 C1 2 pieces; rare ovum; serous cyst 7.3 Ovary Ovary 0000992 1051 816 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992565 246887 0.96867 0.993948 0.701134 23342 1 76 0.00212364 149 0 7.74545e+07 0.0310283 79426 7.79261e+07 2.7195e+06 23392 3.85851e+07 0 0.267536 0.993948 0.696891 7.74545e+07 0.00253516 1.70455e+07 7.75695e+06 1.71663e+07 154 1.71967e+07 1.3349e+07 0.00232911 1.71193e+07 49.8873 0.00101925 0.995331 0 50.1764 GTEX-1HBPH-2826-SM-9WYUU 2 C1 2 pieces; autolyzed atrophic endometrium; intact myometrium 7.3 Uterus Uterus 0000995 1053 815 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992404 204134 0.966861 0.993788 0.731368 24176 1 76 0.00263461 195 0 9.09169e+07 0.0328436 242904 9.14852e+07 6.65603e+06 24222 4.52555e+07 0 0.235493 0.993788 0.726825 9.09169e+07 0.00463021 1.96845e+07 7.87853e+06 1.9835e+07 205 1.97927e+07 1.3262e+07 0.00363102 1.98543e+07 50.0777 0.00265512 0.995172 0 50.1904 GTEX-1HBPH-2926-SM-9WPNX 1 C1 6 pieces; preserved epithelium 5.7 Vagina Vagina 0000996 1054 815 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986614 164197 0.968727 0.988455 0.741562 23319 1 76 0.00647217 119 0 6.39891e+07 0.0310457 303715 6.47364e+07 1.03388e+07 23345 3.18483e+07 0 0.227165 0.988455 0.733001 6.39891e+07 0.00715177 1.42373e+07 8.41601e+06 1.42991e+07 128 1.43104e+07 9.40294e+06 0.00681134 1.43445e+07 50.0594 0.00469156 0.990297 0 50.1082 GTEX-1HBPH-2926-SM-DK2JY 1 C1 6 pieces; preserved epithelium Vagina Vagina 0000996 1054 815 BP-60962 DNA Extraction from Paxgene-derived Lysate Plate Based 02/26/2015 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HBPH-3026-SM-9WPNY 1 C1 4 fragmented pieces 6.5 Brain Brain - Cerebellum 0002037 1071 798 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987025 239098 0.949793 0.9887 0.717128 24037 1 76 0.00644465 125 0 7.49244e+07 0.0498949 1.35114e+06 7.57806e+07 1.14995e+07 24069 3.72877e+07 0 0.232665 0.9887 0.709024 7.49244e+07 0.00685038 1.62468e+07 1.02993e+07 1.63467e+07 152 1.63635e+07 8.18282e+06 0.00664717 1.6338e+07 49.9609 0.0178296 0.990375 0 50.1532 GTEX-1HBPH-3126-SM-9WYUV 1 C1 4 pieces 7.2 Brain Brain - Cortex 0001870 1074 795 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994281 500217 0.960366 0.995533 0.819631 24589 1 76 0.00229592 371 0 1.06376e+08 0.0392792 4.68558e+06 1.06853e+08 7.26465e+06 24608 5.30144e+07 0 0.140735 0.995533 0.81597 1.06376e+08 0.00399288 2.31615e+07 2.25358e+07 2.35189e+07 341 2.34462e+07 1.15923e+07 0.00314333 2.33441e+07 49.8909 0.0438507 0.996784 0 50.3828 GTEX-1HBPH-3226-SM-C1YRB 1 C1 1 piece; posterior lobe, outlined, occupies 40% 7.5 Pituitary Pituitary 0000007 1075 795 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989782 744331 0.960252 0.992254 0.745929 25662 1 76 0.00188583 206 0 9.72529e+07 0.0394747 351882 9.80121e+07 4.27374e+06 25709 4.83837e+07 0 0.214323 0.992254 0.740151 9.72529e+07 0.00244169 2.08822e+07 1.15764e+07 2.09747e+07 250 2.10612e+07 1.5209e+07 0.00216307 2.10164e+07 49.9468 0.00359019 0.994726 0 50.1105 GTEX-1HBPI-0003-SM-AG5Y4 B1 Blood Whole Blood 0013756 729 BP-57756 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/03/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HBPI-0005-SM-ARZLB B1 7.6 Blood Whole Blood 0013756 729 BP-57753 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.95161 917565 0.963811 0.954484 0.771377 17776 1 76 0.00251037 92 0 6.71637e+07 0.034767 150629 7.03665e+07 3.04051e+06 17787 3.30199e+07 0 0.192434 0.954484 0.736267 6.71637e+07 0.0042033 1.51608e+07 1.14108e+08 1.58903e+07 113 1.63737e+07 1.84209e+07 0.00335429 1.48561e+07 47.5703 0.00214064 0.957359 0 51.1747 GTEX-1HBPI-0011-R10a-SM-A96RZ B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 753 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.994042 373910 0.965775 0.995489 0.855285 23438 1 76 0.00169549 269 0 8.67113e+07 0.033837 3.21399e+06 8.71043e+07 2.91849e+06 23454 4.32116e+07 0 0.11049 0.995489 0.851426 8.67113e+07 0.00208757 1.90535e+07 1.17681e+07 1.92298e+07 286 1.9195e+07 1.11748e+07 0.00189125 1.91919e+07 49.9961 0.0368982 0.996935 0 50.2302 GTEX-1HBPI-0011-R11b-SM-CE6SH B1, A1 6.2 Brain Brain - Cerebellar Hemisphere 0002037 753 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988933 631182 0.954429 0.990317 0.786834 23667 1 76 0.00793572 163 0 8.61328e+07 0.0452443 1.49803e+06 8.6975e+07 1.37911e+07 23691 4.2838e+07 0 0.167594 0.990317 0.779216 8.61328e+07 0.00739443 1.86855e+07 1.07873e+07 1.88211e+07 194 1.89024e+07 1.11667e+07 0.00766545 1.87112e+07 49.7458 0.0172237 0.991702 0 50.1808 GTEX-1HBPI-0011-R1b-SM-A9SKF B1, A1 7 Brain Brain - Hippocampus 0001954 753 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989945 571310 0.959941 0.991529 0.821649 25003 1 76 0.0066346 273 0 1.02118e+08 0.0397505 5.25134e+06 1.02991e+08 1.90386e+07 25030 5.08459e+07 0 0.138293 0.991529 0.814689 1.02118e+08 0.00786164 2.22715e+07 1.97035e+07 2.26961e+07 297 2.26386e+07 1.16069e+07 0.00724714 2.24639e+07 49.8063 0.0509886 0.993114 0 50.4721 GTEX-1HBPI-0011-R4a-SM-CJI3K B1, A1 6.4 Brain Brain - Amygdala 0001876 753 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.9909 1.27077e+06 0.954204 0.993028 0.830032 22959 1 76 0.00181481 370 0 8.42803e+07 0.0456069 8.73946e+06 8.4872e+07 5.17603e+06 22975 4.1905e+07 0 0.124172 0.993028 0.824246 8.42803e+07 0.00253251 1.79853e+07 3.48602e+07 1.85782e+07 364 1.85103e+07 7.127e+06 0.00217289 1.8215e+07 49.598 0.102972 0.995157 0 50.8108 GTEX-1HBPI-0011-R5a-SM-CKZOW B1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 753 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990451 1.08936e+06 0.948945 0.992703 0.81664 24034 1 76 0.0018756 268 0 9.45759e+07 0.0507801 5.51305e+06 9.52711e+07 9.07503e+06 24054 4.70841e+07 0 0.132304 0.992703 0.810681 9.45759e+07 0.00294747 2.01905e+07 3.30114e+07 2.06785e+07 320 2.06176e+07 9.71766e+06 0.00241032 2.04343e+07 49.7768 0.057867 0.994955 0 50.597 GTEX-1HBPI-0011-R6b-SM-A9G1T B1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 753 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98676 467619 0.957926 0.991599 0.811947 24396 1 76 0.00372008 267 0 9.57735e+07 0.0418336 6.68903e+06 9.65849e+07 8.99116e+06 24421 4.7564e+07 0 0.145978 0.991599 0.805126 9.57735e+07 0.00369952 2.06278e+07 2.80275e+07 2.07872e+07 296 2.08692e+07 8.63292e+06 0.00370998 2.09255e+07 50.0673 0.0692554 0.996438 0 50.1925 GTEX-1HBPI-0011-R8a-SM-A9G1S B1, A1 6.6 Brain Brain - Hypothalamus 0001898 753 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.982488 298494 0.966252 0.989785 0.836281 22465 1 76 0.00376608 273 0 8.30355e+07 0.0335881 8.63842e+06 8.38925e+07 8.3463e+06 22477 4.11437e+07 0 0.129971 0.989785 0.827738 8.30355e+07 0.00391892 1.78742e+07 2.59269e+07 1.84886e+07 296 1.84244e+07 5.38334e+06 0.00384094 1.84054e+07 49.9743 0.10297 0.997082 0 50.8447 GTEX-1HBPI-0011-R9b-SM-ARL76 B1, A1 6.4 Brain Brain - Spinal cord (cervical c-1) 0006469 753 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.990729 1.25456e+06 0.95044 0.99082 0.80401 22883 1 76 0.00188168 173 0 6.40665e+07 0.0492601 2.03206e+06 6.46601e+07 4.65454e+06 22903 3.18039e+07 0 0.14643 0.99082 0.796629 6.40665e+07 0.00234685 1.39801e+07 1.58886e+07 1.41771e+07 173 1.44543e+07 8.42644e+06 0.00211424 1.37109e+07 48.6802 0.0314268 0.990911 0 50.3498 GTEX-1HBPI-0126-SM-CMKGQ 1 B1 6 pieces; large atheromatous plaque occupies up to 60% 6.3 Blood Vessel Artery - Aorta 0001496 932 991 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993983 180190 0.974821 0.994667 0.82159 22409 1 76 0.00217822 171 0 8.03023e+07 0.0247513 374733 8.07329e+07 5.94722e+06 22432 4.00095e+07 0 0.153231 0.994667 0.817208 8.03023e+07 0.00270144 1.73455e+07 7.75959e+06 1.74474e+07 196 1.74221e+07 1.4886e+07 0.00243965 1.74336e+07 50.0165 0.00464164 0.995351 0 50.1464 GTEX-1HBPI-0226-SM-ADEJ7 1 B1 2 pieces; 10% fat in 1 fragmented piece 8.2 Muscle Muscle - Skeletal 0011907 933 990 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982607 595907 0.983569 0.989124 0.854763 20413 1 76 0.00298408 269 0 9.74718e+07 0.0162347 2.13543e+06 9.85436e+07 1.05727e+07 20427 4.82915e+07 0 0.128806 0.989124 0.845467 9.74718e+07 0.00287394 2.09752e+07 1.4323e+07 2.14955e+07 276 2.18022e+07 1.83928e+07 0.00292937 2.1211e+07 49.3128 0.0216699 0.995641 0 50.6126 GTEX-1HBPI-0326-SM-A9G3N 1 B1 2 pieces; some glands are moderately autolyzed 5.7 Prostate Prostate 0002367 934 989 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.982658 151346 0.965255 0.988501 0.786727 23241 1 76 0.00397904 122 0 5.68689e+07 0.0345188 1.4816e+06 5.75304e+07 5.60919e+06 23272 2.8191e+07 0 0.178527 0.988501 0.777681 5.68689e+07 0.00460504 1.24545e+07 6.91635e+06 1.27405e+07 142 1.28226e+07 6.09243e+06 0.00428608 1.26715e+07 49.7035 0.0257534 0.994344 0 50.5675 GTEX-1HBPI-0526-SM-ARZNN 1 B1 6 pieces; 2 pieces have small submucosal gland remnants (arrowed) 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 938 985 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986656 575037 0.963375 0.988408 0.765771 22256 1 76 0.00258168 118 0 5.68142e+07 0.0364211 665070 5.74805e+07 3.01188e+06 22272 2.81684e+07 0 0.197603 0.988408 0.756894 5.68142e+07 0.00366103 1.20869e+07 6.96302e+06 1.22884e+07 131 1.25448e+07 8.05021e+06 0.0031204 1.19182e+07 48.7193 0.0115704 0.99016 0 50.4134 GTEX-1HBPI-0626-SM-9WPP4 1 B1 6 pieces; several prominent submucosal glands with dilated chronically inflamed ducts 9.2 Esophagus Esophagus - Mucosa 0006920 939 984 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987601 274287 0.978503 0.989181 0.79642 21616 1 76 0.00639923 153 0 7.56898e+07 0.0209798 480739 7.65176e+07 1.17383e+07 21637 3.76787e+07 0 0.182082 0.989181 0.787804 7.56898e+07 0.00696123 1.72325e+07 1.2102e+07 1.73138e+07 151 1.7363e+07 1.40115e+07 0.00667978 1.72996e+07 49.9085 0.00628272 0.99076 0 50.1177 GTEX-1HBPI-0726-SM-9WG7Z 1 B1 6 pieces; 2 pieces have little or no muscularis propria 5.8 Stomach Stomach 0000945 940 983 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.982054 147242 0.98449 0.98453 0.888003 22265 1 76 0.00224969 292 0 9.26848e+07 0.0147058 1.22383e+06 9.41412e+07 6.75141e+06 22279 4.61032e+07 0 0.0964867 0.98453 0.874266 9.26848e+07 0.00362512 2.15734e+07 1.05461e+08 2.18271e+07 255 2.18752e+07 2.58988e+07 0.00293567 2.17553e+07 49.8626 0.0129999 0.987006 0 50.2923 GTEX-1HBPI-0826-SM-9WYTX 1 B1 2 pieces; several foci of lymphocytes consistent with Hashimoto thyroiditis 7.1 Thyroid Thyroid 0002046 941 982 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991894 233229 0.969479 0.993525 0.773779 24976 1 76 0.00264901 201 0 8.98534e+07 0.0299919 237415 9.0439e+07 6.28038e+06 25010 4.4734e+07 0 0.195699 0.993525 0.768769 8.98534e+07 0.00436685 1.97701e+07 8.96552e+06 1.99292e+07 203 1.99586e+07 1.56539e+07 0.00350652 1.9884e+07 49.9064 0.00262514 0.995155 0 50.2004 GTEX-1HBPI-1026-SM-AHZ4N 1 B1 2 pieces; no active or chronic lesions 6.3 Liver Liver 0001114 942 981 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.992748 442022 0.971525 0.994221 0.818071 22099 1 76 0.00176526 368 0 9.93399e+07 0.0283115 2.1629e+06 9.99173e+07 3.63576e+06 22128 4.94925e+07 0 0.153455 0.994221 0.813343 9.93399e+07 0.0025488 2.16646e+07 1.71449e+07 2.18907e+07 339 2.17562e+07 1.17664e+07 0.00215645 2.19236e+07 50.1916 0.0216468 0.995694 0 50.2595 GTEX-1HBPI-1426-SM-B2LW7 1 B1 2 pieces; <5% fibrous content; refixed at VARI 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 953 970 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989311 397171 0.972039 0.991216 0.767548 23100 1 76 0.00248358 139 0 6.08047e+07 0.0276623 445576 6.13435e+07 3.26158e+06 23124 3.02189e+07 0 0.204491 0.991216 0.760806 6.08047e+07 0.00389573 1.34258e+07 5.95421e+06 1.34438e+07 148 1.34726e+07 9.27718e+06 0.0031883 1.35033e+07 50.0569 0.00726362 0.993121 0 50.0334 GTEX-1HBPI-1526-SM-C1YQ1 1 B1 6 pieces; well trimmed; 20% dermal fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 954 969 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98938 449180 0.97493 0.991787 0.811054 23469 1 76 0.00184069 214 0 7.88882e+07 0.0247954 346228 7.95415e+07 3.53087e+06 23502 3.92283e+07 0 0.163876 0.991787 0.804392 7.88882e+07 0.00244112 1.7114e+07 8.18237e+06 1.73476e+07 193 1.73818e+07 1.46556e+07 0.00214018 1.72525e+07 49.8133 0.0043528 0.994193 0 50.339 GTEX-1HBPI-1626-SM-ADEJ5 1 B1 2 pieces; moderate plaque with widely patent lumen; well trimmed 7.5 Blood Vessel Artery - Tibial 0007610 955 968 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982185 456999 0.971902 0.988744 0.80689 22796 1 76 0.00326179 285 0 1.13553e+08 0.0276869 479833 1.14846e+08 1.17386e+07 22828 5.62401e+07 0 0.165012 0.988744 0.797808 1.13553e+08 0.00350914 2.40812e+07 9.5842e+06 2.43382e+07 308 2.46081e+07 2.11077e+07 0.00338464 2.44675e+07 49.8568 0.00417807 0.995304 0 50.2654 GTEX-1HBPI-1826-SM-ADEHE 1 B1 2 pieces; <1%b fibrous content; refixed at VARI 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1011 912 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980653 326992 0.977126 0.987286 0.802798 23798 1 76 0.00335723 273 0 9.30474e+07 0.022549 1.23904e+06 9.42457e+07 1.04151e+07 23823 4.6084e+07 0 0.174328 0.987286 0.792591 9.30474e+07 0.00363085 2.01837e+07 1.35395e+07 2.08048e+07 285 2.10272e+07 1.29594e+07 0.00349312 2.0507e+07 49.3738 0.0131469 0.993918 0 50.7576 GTEX-1HBPI-1926-SM-CE6RT 1 B1 2 pieces; 20% internal/external fat 6.3 Adrenal Gland Adrenal Gland 0002369 1015 908 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988771 343080 0.972074 0.990493 0.794329 20608 1 76 0.00787038 118 0 6.07863e+07 0.0277355 3.95144e+06 6.13697e+07 1.00864e+07 20626 3.02393e+07 0 0.177745 0.990493 0.786777 6.07863e+07 0.00762872 1.30741e+07 1.19381e+07 1.33799e+07 147 1.34233e+07 5.13573e+06 0.00774976 1.3124e+07 49.4362 0.0643875 0.992215 0 50.578 GTEX-1HBPI-2026-SM-CE6RZ 1 B1 6 pieces; tubules variably autolyzed; no sign of active or chronic disease; focally congested 6.4 Kidney Kidney - Cortex 0001225 1016 907 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988842 365189 0.971373 0.9907 0.810292 24173 1 76 0.00746422 185 0 7.99422e+07 0.0284417 3.00783e+06 8.06927e+07 1.24746e+07 24196 3.97678e+07 0 0.161081 0.9907 0.802756 7.99422e+07 0.00792712 1.77339e+07 1.59472e+07 1.78673e+07 204 1.79423e+07 7.8572e+06 0.00769523 1.7783e+07 49.7771 0.0372751 0.992558 0 50.1874 GTEX-1HBPI-2126-SM-ARL9K 1 B1 6 pieces; well trimmed; 5% dermal fat 8.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1021 902 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992513 559349 0.974092 0.992433 0.798648 22439 1 76 0.00183461 147 0 5.65573e+07 0.0256221 234354 5.69886e+07 3.18361e+06 22464 2.81242e+07 0 0.175444 0.992433 0.792604 5.65573e+07 0.00227282 1.24177e+07 6.44784e+06 1.24306e+07 130 1.26243e+07 1.08448e+07 0.00205374 1.22226e+07 49.1917 0.0041123 0.992352 0 50.026 GTEX-1HBPI-2226-SM-9WYTY 1 B1 6 pieces; mostly well dissected muscle; small foci of mucosa 5.9 Colon Colon - Sigmoid 0001159 1023 900 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992811 102965 0.970279 0.993887 0.819404 24041 1 76 0.00258403 208 0 8.57488e+07 0.0290965 1.09328e+06 8.62762e+07 6.09933e+06 24070 4.27048e+07 0 0.150875 0.993887 0.814395 8.57488e+07 0.00446782 1.84844e+07 7.81053e+06 1.8696e+07 243 1.86396e+07 1.27581e+07 0.00352491 1.86324e+07 49.9904 0.0126718 0.994964 0 50.2845 GTEX-1HBPI-2726-SM-9WPPF 1 B1 4 pieces 6.8 Brain Brain - Cerebellum 0002037 1075 848 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98611 393500 0.944944 0.988124 0.715664 24236 1 76 0.00655682 127 0 8.0615e+07 0.0547273 1.35971e+06 8.15839e+07 1.28569e+07 24268 4.0106e+07 0 0.22928 0.988124 0.707165 8.0615e+07 0.00735777 1.73602e+07 1.73525e+07 1.75203e+07 159 1.75673e+07 9.70322e+06 0.00695648 1.74592e+07 49.8457 0.0166664 0.990139 0 50.2295 GTEX-1HBPI-2826-SM-ARZNO 1 B1 4 pieces; adherent meninges on 1 piece 6 Brain Brain - Cortex 0001870 1077 846 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136,LCSET-8681 02/23/2016 TruSeq.v1 RNASEQ 0.984388 2.52667e+06 0.953443 0.98644 0.77273 26043 1 76 0.00221123 373 0 1.33592e+08 0.0462595 6.071e+06 1.35428e+08 8.94424e+06 26080 6.61081e+07 0 0.180713 0.98644 0.762251 1.33592e+08 0.00348601 2.8289e+07 5.59399e+07 2.89898e+07 433 2.96745e+07 1.43981e+07 0.0028473 2.78258e+07 48.3924 0.0448282 0.988492 0 50.6117 GTEX-1HBPM-0006-SM-A9SKK C1 8.1 Blood Whole Blood 0013756 652 BP-57753 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.965233 470902 0.980158 0.96633 0.791277 18060 1 76 0.00652854 118 0 1.02281e+08 0.0180057 208030 1.05845e+08 1.74577e+07 18069 5.08583e+07 0 0.188882 0.96633 0.764635 1.02281e+08 0.00775147 2.39171e+07 1.4117e+08 2.40399e+07 147 2.40634e+07 2.54388e+07 0.00713931 2.40271e+07 49.9623 0.00196542 0.967428 0 50.1281 GTEX-1HBPM-0011-R10a-SM-CJI3Q C1, A1 5.9 Brain Brain - Frontal Cortex (BA9) 0009834 672 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991224 697361 0.969616 0.993231 0.839965 21131 1 76 0.00172537 264 0 7.57108e+07 0.0302151 7.85761e+06 7.62268e+07 4.55079e+06 21137 3.76638e+07 0 0.129652 0.993231 0.834279 7.57108e+07 0.00255797 1.61678e+07 3.13308e+07 1.69359e+07 324 1.6723e+07 5.78097e+06 0.00214083 1.64954e+07 49.6574 0.103082 0.995238 0 51.1601 GTEX-1HBPM-0011-R4a-SM-CJI3L C1, A1 5.7 Brain Brain - Amygdala 0001876 672 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 EXCLUDE 0.990553 472978 0.976055 0.992466 0.839947 19159 1 76 0.00167436 367 0 9.39219e+07 0.0238923 1.51423e+07 9.46349e+07 5.76828e+06 19167 4.67586e+07 0 0.136109 0.992466 0.833618 9.39219e+07 0.00258668 1.97269e+07 4.77833e+07 2.12608e+07 413 2.04707e+07 3.74844e+06 0.00212964 2.06067e+07 50.1656 0.160008 0.994378 0 51.8711 GTEX-1HBPM-0011-R5b-SM-CJI3I C1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 672 BP-71187 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9107 07/06/2016 TruSeq.v1 EXCLUDE 0.991745 833485 0.952916 0.993211 0.780759 24251 1 76 0.00208843 202 0 8.17398e+07 0.0468324 4.95079e+06 8.22985e+07 5.08691e+06 24286 4.06782e+07 0 0.172157 0.993211 0.775458 8.17398e+07 0.00273272 1.75861e+07 1.85992e+07 1.80892e+07 254 1.80402e+07 8.44975e+06 0.0024101 1.77371e+07 49.5764 0.0601565 0.994677 0 50.705 GTEX-1HBPM-0011-R6b-SM-ARU73 C1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 672 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992658 472601 0.965106 0.994256 0.834344 20048 1 76 0.00172583 262 0 6.49749e+07 0.0348102 8.15857e+06 6.53503e+07 2.18148e+06 20057 3.23785e+07 0 0.130762 0.994256 0.829552 6.49749e+07 0.00242558 1.37985e+07 3.13805e+07 1.44231e+07 274 1.41344e+07 2.87003e+06 0.00207514 1.41623e+07 50.0493 0.124844 0.995854 0 51.1067 GTEX-1HBPM-0011-R9b-SM-ARL7C C1, A1 5.7 Brain Brain - Spinal cord (cervical c-1) 0006469 672 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991845 749502 0.952553 0.992022 0.793787 20957 1 76 0.00183119 155 0 5.25272e+07 0.0472165 2.89067e+06 5.29496e+07 4.07419e+06 20969 2.60965e+07 0 0.158766 0.992022 0.787454 5.25272e+07 0.00237086 1.14723e+07 1.26217e+07 1.1654e+07 148 1.16858e+07 5.9535e+06 0.00210098 1.14425e+07 49.474 0.0545928 0.992199 0 50.3928 GTEX-1HBPM-0126-SM-ARL9E 1 C1 2 pieces; ~80% fat, rest is fibrous stroma with scattered ductal/lobular component 6.1 Breast Breast - Mammary Tissue 0008367 674 700 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992082 743663 0.972593 0.992265 0.742853 22571 1 76 0.00194685 124 0 5.88665e+07 0.0270731 681866 5.93254e+07 3.77523e+06 22597 2.92504e+07 0 0.22974 0.992265 0.737107 5.88665e+07 0.00237914 1.29692e+07 8.57291e+06 1.2903e+07 137 1.31917e+07 8.69314e+06 0.00216296 1.26883e+07 49.0275 0.0114937 0.992447 0 49.872 GTEX-1HBPM-0226-SM-ARL9F 1 C1 6 pieces; includes up to ~10% internal fat, epidermis measures 20 to 31 microns, hyperkeratosis, solar elastosis 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 677 698 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.99168 566460 0.967547 0.991963 0.759293 22660 1 76 0.00185054 144 0 5.87548e+07 0.0322226 616009 5.92309e+07 4.44098e+06 22682 2.92087e+07 0 0.208254 0.991963 0.75319 5.87548e+07 0.00242087 1.29173e+07 8.06777e+06 1.29607e+07 145 1.31296e+07 8.99534e+06 0.00213562 1.2765e+07 49.296 0.0104001 0.992247 0 50.0839 GTEX-1HBPM-0326-SM-CMKGR 0 C1 2 pieces; mature fat 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 679 696 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994183 296830 0.973979 0.995055 0.764294 23559 1 76 0.00222605 213 0 9.53693e+07 0.0257356 750117 9.58433e+07 7.46135e+06 23599 4.75319e+07 0 0.209685 0.995055 0.760515 9.53693e+07 0.00270082 2.0936e+07 1.01101e+07 2.11779e+07 249 2.1164e+07 1.48149e+07 0.00246323 2.10342e+07 49.8462 0.00782649 0.995926 0 50.2872 GTEX-1HBPM-0426-SM-CKZOO 1 C1 2 pieces 8.5 Muscle Muscle - Skeletal 0011907 682 693 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992441 340608 0.981901 0.994186 0.865808 21193 1 76 0.00169916 397 0 1.17057e+08 0.017879 1.63980e+06 1.17741e+08 1.10781e+07 21215 5.83468e+07 0 0.116093 0.994186 0.860774 1.17057e+08 0.00257814 2.57259e+07 1.16539e+07 2.59614e+07 338 2.60434e+07 2.29294e+07 0.00213787 2.58221e+07 49.7866 0.0139272 0.995932 0 50.2278 GTEX-1HBPM-0526-SM-ARZND 1 C1 2 pieces; 1 piece includes ~10% attached fat 6.4 Nerve Nerve - Tibial 0001323 687 689 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.961031 723587 0.958946 0.96231 0.678201 24077 1 76 0.00289837 144 0 6.39265e+07 0.0407639 331392 6.64302e+07 3.85136e+06 24124 3.1636e+07 0 0.280745 0.96231 0.652639 6.39265e+07 0.00399457 1.36532e+07 7.56226e+06 1.43165e+07 131 1.47149e+07 8.43665e+06 0.00344574 1.33264e+07 47.5243 0.00498857 0.96359 0 51.1858 GTEX-1HBPM-0626-SM-9YFMH 1 C1 2 pieces; mild plaque 7.2 Blood Vessel Artery - Tibial 0007610 688 688 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993308 310991 0.971619 0.994521 0.817263 23177 1 76 0.0022379 381 0 1.24418e+08 0.0280337 787043 1.25103e+08 4.03724e+06 23210 6.19919e+07 0 0.154357 0.994521 0.812785 1.24418e+08 0.00338435 2.68549e+07 9.88724e+06 2.70966e+07 342 2.70542e+07 2.31511e+07 0.00281043 2.70436e+07 49.9902 0.00629115 0.995734 0 50.224 GTEX-1HBPM-0726-SM-9YFL7 1 C1 2 pieces; well-trimmed, but with small portion of intradermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 690 687 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992783 273521 0.974376 0.994046 0.748557 24012 1 76 0.00252057 384 0 1.14749e+08 0.0253909 681567 1.15437e+08 4.14317e+06 24052 5.71742e+07 0 0.225819 0.994046 0.7441 1.14749e+08 0.00358277 2.52817e+07 1.04949e+07 2.54521e+07 351 2.5445e+07 1.72348e+07 0.00305099 2.54358e+07 49.991 0.00590425 0.995309 0 50.1679 GTEX-1HBPM-0826-SM-9WYSP 1 C1 2 pieces; some congestion, anthracotic pigment, some fibrosis and pigmented macrophages, widening of airspaces 6.3 Lung Lung 0008952 691 686 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992503 189114 0.970876 0.993804 0.737845 24529 1 76 0.00269929 171 0 8.685e+07 0.0287161 469251 8.73915e+07 5.91473e+06 24563 4.3249e+07 0 0.233032 0.993804 0.733273 8.685e+07 0.00463143 1.91545e+07 1.01943e+07 1.93301e+07 199 1.93327e+07 1.29905e+07 0.0036641 1.92584e+07 49.9037 0.00536953 0.995105 0 50.2282 GTEX-1HBPM-0926-SM-ARL9C 1 C1 2 pieces; variably sized follicles 6 Thyroid Thyroid 0002046 693 685 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992383 280721 0.960569 0.9923 0.690899 22732 1 76 0.00189237 108 0 5.37547e+07 0.0391622 296137 5.41718e+07 3.70545e+06 22771 2.67538e+07 0 0.26967 0.9923 0.685579 5.37547e+07 0.00237505 1.17345e+07 6.11032e+06 1.17446e+07 116 1.18516e+07 6.99548e+06 0.00213373 1.16255e+07 49.5185 0.00546662 0.992216 0 50.0214 GTEX-1HBPM-1026-SM-ARL9D 1 C1 2 pieces; includes residual pooled blood/clot 7.1 Heart Heart - Atrial Appendage 0006631 693 685 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.99359 987519 0.97727 0.993932 0.767769 21712 1 76 0.00164318 154 0 7.5068e+07 0.0224977 1.29222e+06 7.55263e+07 3.29851e+06 21735 3.73303e+07 0 0.209501 0.993932 0.76311 7.5068e+07 0.00212091 1.59491e+07 1.14564e+07 1.58399e+07 177 1.61232e+07 1.1745e+07 0.00188196 1.5684e+07 49.3095 0.0171095 0.994274 0 49.8282 GTEX-1HBPM-1126-SM-9YFL2 1 C1 2 pieces; fragmented, calcific atherosclerosis 5.8 Blood Vessel Artery - Coronary 0001621 696 683 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7536,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.992281 119222 0.971987 0.993264 0.795337 21752 1 76 0.00257453 133 0 5.95382e+07 0.0277162 306748 5.99419e+07 3.19021e+06 21769 2.96554e+07 0 0.17665 0.993264 0.78998 5.95382e+07 0.00369261 1.29018e+07 5.65727e+06 1.30428e+07 148 1.2974e+07 9.84923e+06 0.00313301 1.30384e+07 50.1238 0.00511742 0.994248 0 50.2718 GTEX-1HBPM-1226-SM-A9SM8 1 C1 2 pieces 6.1 Heart Heart - Left Ventricle 0006566 697 682 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.991085 197638 0.980746 0.992566 0.842315 20498 1 76 0.00625312 262 0 8.5089e+07 0.0191665 6.09559e+06 8.57263e+07 1.49607e+07 20510 4.23995e+07 0 0.13843 0.992566 0.836053 8.5089e+07 0.00767838 1.85038e+07 2.69882e+07 1.90393e+07 291 1.90336e+07 6.59944e+06 0.00696469 1.85668e+07 49.3792 0.0711053 0.994047 0 50.7131 GTEX-1HBPM-1326-SM-9YFMB 1 C1 6 pieces; atherosclerosis, some calcification 6.7 Blood Vessel Artery - Aorta 0001496 699 681 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992077 229316 0.972284 0.993474 0.767637 22758 1 76 0.00255003 172 0 8.49416e+07 0.0273824 279199 8.54996e+07 2.79605e+06 22792 4.22836e+07 0 0.204647 0.993474 0.762627 8.49416e+07 0.00380854 1.84091e+07 7.82518e+06 1.8558e+07 193 1.85414e+07 1.47667e+07 0.0031784 1.85448e+07 50.0046 0.0032655 0.99487 0 50.2014 GTEX-1HBPM-1426-SM-9WPPE 1 C1 6 pieces; epithelium is partially sloughing, small focus of muscularis (not target); ectatic, thick-walled vessels c/w varices 7.1 Esophagus Esophagus - Mucosa 0006920 700 680 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987179 178063 0.970203 0.988936 0.802098 22890 1 76 0.00625419 131 0 6.93705e+07 0.0296408 1.53306e+06 7.01466e+07 1.11465e+07 22913 3.45424e+07 0 0.168104 0.988936 0.793224 6.93705e+07 0.00705438 1.54105e+07 8.78262e+06 1.55701e+07 164 1.55224e+07 8.47233e+06 0.00665357 1.55713e+07 50.0786 0.0218552 0.990693 0 50.2576 GTEX-1HBPM-1526-SM-A9G3H 1 C1 6 pieces; target musculairs 5.9 Esophagus Esophagus - Muscularis 0004648 701 680 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985505 166706 0.967975 0.990476 0.77767 22119 1 76 0.00400477 123 0 5.99834e+07 0.0318563 1.216e+06 6.05602e+07 5.59119e+06 22146 2.97655e+07 0 0.190305 0.990476 0.770263 5.99834e+07 0.00425918 1.29252e+07 6.62395e+06 1.32224e+07 141 1.32938e+07 7.26528e+06 0.00412967 1.31194e+07 49.6697 0.0200792 0.995447 0 50.5684 GTEX-1HBPM-1726-SM-A8N9W 1 C1 2 pieces; lobulated mature fat, clusters of reactive mesothelial cells, mild chronic inflammation 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 704 678 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983824 315363 0.973904 0.98655 0.730299 24924 1 76 0.011011 131 0 7.80319e+07 0.0252671 299321 7.90958e+07 1.38964e+07 24963 3.87209e+07 0 0.243605 0.98655 0.720477 7.80319e+07 0.0115649 1.7213e+07 1.07302e+07 1.73539e+07 138 1.74391e+07 1.25827e+07 0.0112872 1.73419e+07 49.8602 0.00378428 0.989275 0 50.2037 GTEX-1HBPM-2626-SM-9WYU5 1 C1 6 pieces; target muscularis 5.6 Colon Colon - Sigmoid 0001159 731 656 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991856 240072 0.968754 0.993605 0.771936 23835 1 76 0.00255179 275 0 9.34641e+07 0.0309869 1.22295e+06 9.40656e+07 6.51375e+06 23868 4.65272e+07 0 0.196817 0.993605 0.767 9.34641e+07 0.00468 2.02661e+07 1.0557e+07 2.04925e+07 261 2.04731e+07 1.27649e+07 0.00361402 2.04447e+07 49.9652 0.013001 0.995354 0 50.2778 GTEX-1HBPM-2726-SM-9WYUA 1 C1 6 pieces 6.2 Vagina Vagina 0000996 734 653 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991056 127776 0.968173 0.99278 0.756277 23152 1 76 0.00239166 164 0 8.12074e+07 0.0316544 704105 8.1798e+07 5.68815e+06 23178 4.04318e+07 0 0.211896 0.99278 0.750817 8.12074e+07 0.00473922 1.80092e+07 9.20712e+06 1.81467e+07 202 1.8115e+07 1.09571e+07 0.0035634 1.81821e+07 50.0924 0.00860785 0.994505 0 50.1903 GTEX-1HBPM-2726-SM-DK2K1 1 C1 6 pieces Vagina Vagina 0000996 734 653 BP-63650 DNA Extraction from Paxgene-derived Lysate Plate Based 05/19/2015 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HBPM-2926-SM-CL54E 1 C1 4 pieces 6.6 Brain Brain - Cortex 0001870 738 650 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991392 555487 0.97111 0.993617 0.850244 22597 1 76 0.00241272 516 0 1.12432e+08 0.028707 1.19867e+07 1.13154e+08 1.52097e+07 22612 5.59583e+07 0 0.120866 0.993617 0.844817 1.12432e+08 0.00384076 2.38984e+07 3.69685e+07 2.59074e+07 450 2.54032e+07 7.8677e+06 0.00312514 2.45605e+07 49.1567 0.105932 0.995843 0 52.0169 GTEX-1HBPN-0002-SM-EYYW2 B1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -115 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988442 572903 0.972571 0.991023 0.83046 20457 1 76 0.00245275 151 0 7.3571e+07 0.0261302 320488 7.42375e+07 2.64583e+06 20476 3.65546e+07 0 0.142111 0.991023 0.823005 7.3571e+07 0.00332359 1.6413e+07 8.16122e+06 1.65134e+07 152 1.65808e+07 1.74789e+07 0.00288703 1.65273e+07 49.9193 0.00431707 0.993603 0 50.1526 GTEX-1HBPN-0003-SM-AG5Y8 B1 Blood Whole Blood 0013756 -115 BP-57756 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/03/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HBPN-0006-SM-A8N7X B1 7.8 Blood Whole Blood 0013756 -115 BP-57753 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2014 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.975153 641537 0.965451 0.978077 0.8155 19801 1 76 0.0110595 108 0 7.26696e+07 0.0336516 552135 7.42985e+07 1.31257e+07 19809 3.60741e+07 0 0.149951 0.978077 0.797622 7.26696e+07 0.0123666 1.624e+07 6.34408e+07 1.63985e+07 116 1.64949e+07 1.63643e+07 0.0117111 1.63713e+07 49.812 0.00743131 0.981001 0 50.2428 GTEX-1HBPN-0126-SM-CGQEF 0 B1 6 pieces, no dermal fat; squamous epithelium is ~30-35 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 96 924 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992085 390767 0.968921 0.993758 0.804228 25469 1 76 0.00354426 536 0 1.66397e+08 0.0308731 2.75143e+06 1.67442e+08 1.11542e+07 25517 8.29116e+07 0 0.164693 0.993758 0.799208 1.66397e+08 0.00374629 3.64634e+07 2.01138e+07 3.6838e+07 446 3.66227e+07 2.24964e+07 0.00363972 3.68959e+07 50.1858 0.0164321 0.99543 0 50.2555 GTEX-1HBPN-0226-SM-9YFM1 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~35 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 104 916 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993719 274095 0.97095 0.99499 0.785864 24158 1 76 0.00237363 218 0 9.19084e+07 0.0288144 600324 9.23711e+07 3.18189e+06 24188 4.58069e+07 0 0.185086 0.99499 0.781927 9.19084e+07 0.00354206 2.00993e+07 8.74205e+06 2.03071e+07 244 2.03052e+07 1.55512e+07 0.0029571 2.02132e+07 49.8864 0.00649904 0.996262 0 50.2571 GTEX-1HBPN-0326-SM-9WYS9 0 B1 2 pieces, trace adherent fat 7.8 Nerve Nerve - Tibial 0001323 106 914 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993196 224803 0.963905 0.994521 0.733042 24751 1 76 0.00248563 232 0 8.90475e+07 0.0358315 496723 8.9538e+07 6.1361e+06 24794 4.43689e+07 0 0.230863 0.994521 0.729026 8.90475e+07 0.00418277 1.94989e+07 7.30385e+06 1.96817e+07 224 1.96856e+07 1.31167e+07 0.00333307 1.96047e+07 49.897 0.00554762 0.995845 0 50.2334 GTEX-1HBPN-0426-SM-ACKX8 0 B1 2 pieces, no adherent fat; trace atherosis 7.4 Blood Vessel Artery - Tibial 0007610 109 911 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992937 267717 0.974417 0.994421 0.828157 23270 1 76 0.00270338 281 0 1.18571e+08 0.0251809 648541 1.19236e+08 1.65979e+07 23304 5.90594e+07 0 0.146259 0.994421 0.823537 1.18571e+08 0.00329888 2.552e+07 1.01321e+07 2.57762e+07 310 2.5787e+07 2.25873e+07 0.00300068 2.56761e+07 49.8923 0.00543914 0.995905 0 50.2497 GTEX-1HBPN-0526-SM-A9SM6 0 B1 2 pieces; ~10% interstitial fat/vascular elements 8 Muscle Muscle - Skeletal 0011907 111 909 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.99075 331702 0.981482 0.991966 0.851122 21944 1 76 0.0064405 282 0 1.23567e+08 0.0183066 3.01408e+06 1.24568e+08 2.32643e+07 21964 6.15859e+07 0 0.130359 0.991966 0.844284 1.23567e+08 0.00728681 2.6754e+07 2.36796e+07 2.71869e+07 310 2.70908e+07 2.1186e+07 0.00686313 2.69538e+07 49.8733 0.0241962 0.993181 0 50.4013 GTEX-1HBPN-0926-SM-CGQEG 1 B1 2 pieces, mild intersitial chronic inflammation 8.1 Heart Heart - Atrial Appendage 0006631 125 895 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99452 786029 0.983036 0.996048 0.855156 25146 1 76 0.00335442 522 0 2.3906e+08 0.0167171 7.1441e+06 2.40008e+08 1.67996e+07 25184 1.19192e+08 0 0.12788 0.996048 0.851777 2.3906e+08 0.00311899 5.12761e+07 3.83051e+07 5.21779e+07 438 5.1902e+07 3.58627e+07 0.00324329 5.17635e+07 49.9332 0.0297661 0.997576 0 50.4358 GTEX-1HBPN-1026-SM-9YFLZ 1 B1 6 pieces, minimal atherosis 7.7 Blood Vessel Artery - Aorta 0001496 130 890 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.994171 236601 0.974077 0.995286 0.825265 23110 1 76 0.00235577 275 0 9.01106e+07 0.0255168 387826 9.05374e+07 3.1855e+06 23134 4.49129e+07 0 0.148812 0.995286 0.821374 9.01106e+07 0.00339519 1.94909e+07 6.70684e+06 1.96763e+07 258 1.96585e+07 1.67843e+07 0.0028749 1.96075e+07 49.9351 0.0042836 0.9964 0 50.2367 GTEX-1HBPN-1226-SM-B2LW9 1 B1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 134 886 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992417 430523 0.968263 0.993935 0.750855 23791 1 76 0.0023955 156 0 7.63581e+07 0.0314839 462079 7.6824e+07 3.23384e+06 23828 3.8023e+07 0 0.217408 0.993935 0.746301 7.63581e+07 0.00343989 1.67271e+07 6.76186e+06 1.68323e+07 174 1.68422e+07 1.13813e+07 0.0029169 1.68194e+07 49.9661 0.00601478 0.995455 0 50.1567 GTEX-1HBPN-1326-SM-A8N9Q 1 B1 6 pieces; squamous mucosa up to ~0.3mm, ~20-30% thickness 8.7 Esophagus Esophagus - Mucosa 0006920 138 882 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986309 319339 0.977874 0.988455 0.857876 22729 1 76 0.0103155 206 0 9.57298e+07 0.0215352 745631 9.68478e+07 1.52959e+07 22742 4.75976e+07 0 0.119998 0.988455 0.847972 9.57298e+07 0.0109827 2.14594e+07 1.69876e+07 2.16669e+07 220 2.16676e+07 1.84528e+07 0.0106484 2.16699e+07 50.0026 0.00769899 0.990602 0 50.2405 GTEX-1HBPN-1426-SM-9WPNO 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 143 877 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989121 172909 0.978013 0.990707 0.846007 21844 1 76 0.00619274 154 0 7.23366e+07 0.0216388 736833 7.30151e+07 1.15634e+07 21861 3.60312e+07 0 0.132005 0.990707 0.838146 7.23366e+07 0.00655552 1.55999e+07 6.52851e+06 1.57326e+07 153 1.57161e+07 1.34656e+07 0.00637384 1.5723e+07 50.0109 0.0100915 0.992293 0 50.2119 GTEX-1HBPN-1526-SM-9WYSB 1 B1 2 pieces, trace mononuclear cells 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 144 876 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993089 176368 0.976573 0.994512 0.828971 23050 1 76 0.00218447 274 0 9.28873e+07 0.0231587 1.41028e+06 9.33999e+07 5.90108e+06 23076 4.62942e+07 0 0.147602 0.994512 0.824421 9.28873e+07 0.004206 2.02802e+07 8.72236e+06 2.06017e+07 303 2.04849e+07 1.44368e+07 0.00319379 2.05136e+07 50.0349 0.0150994 0.995934 0 50.3931 GTEX-1HBPN-1626-SM-9WPNP 1 B1 6 pieces, mucosa up to ~1mm, ~40-50% thickness 6.2 Stomach Stomach 0000945 145 875 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987262 113073 0.980261 0.988874 0.84168 22546 1 76 0.00608471 224 0 7.27042e+07 0.0193441 2.12563e+06 7.35222e+07 1.1282e+07 22560 3.62148e+07 0 0.13858 0.988874 0.832316 7.27042e+07 0.00681112 1.64303e+07 3.96706e+07 1.66761e+07 198 1.66072e+07 1.18291e+07 0.00644732 1.66011e+07 49.9908 0.0289115 0.990487 0 50.3712 GTEX-1HBPN-1826-SM-A8N9R 1 B1 6 pieces, mucosa up to ~0.3mm, ~40% thickness 6.5 Colon Colon - Transverse 0001157 148 872 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984151 274150 0.974199 0.987014 0.822457 23563 1 76 0.011195 204 0 8.56984e+07 0.0252295 3.15526e+06 8.68259e+07 1.6748e+07 23585 4.2558e+07 0 0.151742 0.987014 0.811777 8.56984e+07 0.0113037 1.86392e+07 1.68107e+07 1.94568e+07 224 1.94123e+07 8.81943e+06 0.0112492 1.88705e+07 49.2925 0.03634 0.989878 0 51.073 GTEX-1HBPN-1926-SM-A8N9S 1 B1 6 pieces, ~15% target lymphoid aggregates, rep delineated 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 149 871 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984361 281734 0.972574 0.986818 0.797555 24576 1 76 0.0108598 215 0 9.64968e+07 0.0267425 1.11331e+06 9.77858e+07 1.71218e+07 24603 4.79419e+07 0 0.17502 0.986818 0.787041 9.64968e+07 0.0113415 2.1439e+07 1.30153e+07 2.16798e+07 211 2.17046e+07 1.48812e+07 0.0111 2.16346e+07 49.9192 0.0113852 0.989275 0 50.2793 GTEX-1HBPN-2026-SM-B2LWA 1 B1 6 pieces, ~30% 'contaminant mucosa (rep delineated); rest is target muscularis 7.6 Colon Colon - Sigmoid 0001159 150 870 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992535 506716 0.974698 0.994181 0.822322 23077 1 76 0.00229824 213 0 8.1923e+07 0.0250135 970967 8.24026e+07 3.46892e+06 23100 4.07894e+07 0 0.152376 0.994181 0.817536 8.1923e+07 0.00350747 1.77769e+07 6.90011e+06 1.79831e+07 215 1.80006e+07 1.40646e+07 0.00290185 1.78806e+07 49.8327 0.0117832 0.995826 0 50.2883 GTEX-1HBPN-2126-SM-9WPNQ 1 B1 2 pieces, mainly stroma, no abnormalitites 8.3 Prostate Prostate 0002367 153 867 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989866 212222 0.976401 0.991284 0.839973 22877 1 76 0.00618257 167 0 8.44148e+07 0.0232141 566583 8.5157e+07 1.33068e+07 22894 4.20533e+07 0 0.136428 0.991284 0.832652 8.44148e+07 0.00644917 1.80746e+07 6.87821e+06 1.8206e+07 178 1.81923e+07 1.67777e+07 0.00631568 1.82004e+07 50.0111 0.00665339 0.992702 0 50.1811 GTEX-1HBPN-2226-SM-9WPNR 1 B1 2 pieces, spermatogenesis present but appears reduced. Trace atypical mononculear cells 7.2 Testis Testis 0000473 155 865 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987415 318486 0.93448 0.989018 0.738745 33047 1 76 0.0061617 143 0 8.50383e+07 0.0651967 1.28224e+06 8.59825e+07 1.28239e+07 33109 4.23468e+07 0 0.195735 0.989018 0.730632 8.50383e+07 0.00656786 1.78785e+07 1.36746e+07 1.79373e+07 156 1.80152e+07 1.42408e+07 0.00636445 1.79189e+07 49.8661 0.0149127 0.990622 0 50.0821 GTEX-1HBPN-2326-SM-9WPPU 1 B1 2 pieces, minor salivary gland tissue 8.5 Breast Breast - Mammary Tissue 0008367 165 855 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.983325 184177 0.969494 0.985024 0.785046 24706 1 76 0.00733093 138 0 7.49017e+07 0.0265096 370562 7.60405e+07 1.20001e+07 24730 3.71376e+07 0 0.184449 0.985024 0.773289 7.49017e+07 0.00800344 1.66102e+07 1.12309e+07 1.66993e+07 144 1.67487e+07 1.22843e+07 0.0076666 1.66747e+07 49.8893 0.00487322 0.986722 0 50.1337 GTEX-1HC8U-0001-SM-EYYW3 B1 9.2 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -61 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989611 869925 0.966535 0.992158 0.826502 21887 1 76 0.00244812 222 0 9.44768e+07 0.0327267 539455 9.52235e+07 3.13547e+06 21918 4.69948e+07 0 0.140033 0.992158 0.82002 9.44768e+07 0.00344746 2.08765e+07 1.3351e+07 2.10683e+07 221 2.11517e+07 2.27852e+07 0.00294651 2.10248e+07 49.8496 0.00566514 0.994704 0 50.2287 GTEX-1HC8U-0003-SM-DHP2K B1 Blood Whole Blood 0013756 -61 BP-57960 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/10/2014 LCSET-10344,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HC8U-0005-SM-ADEGV B1 8.3 Blood Whole Blood 0013756 -61 BP-57919 RNA isolation_PAXgene Blood RNA (Manual) 11/07/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980732 1.89584e+06 0.923701 0.987549 0.779251 19089 1 76 0.00388566 138 0 7.87991e+07 0.0756872 566315 7.97927e+07 7.88839e+06 19103 3.8996e+07 0 0.144449 0.987549 0.769549 7.87991e+07 0.00456343 1.63099e+07 5.91753e+07 1.6617e+07 147 1.68122e+07 1.57589e+07 0.00422221 1.66426e+07 49.7465 0.00709733 0.994365 0 50.4663 GTEX-1HC8U-0226-SM-9WG7Q 1 B1 2 pieces; up to 3.8 mm external untrimmed fat 8.3 Adrenal Gland Adrenal Gland 0002369 319 960 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992748 180786 0.972995 0.994705 0.801606 23467 1 76 0.0032861 156 0 7.82017e+07 0.026702 1.32299e+06 7.86181e+07 5.91255e+06 23494 3.89457e+07 0 0.171389 0.994705 0.797362 7.82017e+07 0.0040168 1.70608e+07 9.44798e+06 1.72187e+07 192 1.72309e+07 1.11649e+07 0.00365073 1.71889e+07 49.9389 0.0168281 0.996661 0 50.2302 GTEX-1HC8U-0526-SM-9WYSQ 1 B1 2 pieces; mild to moderate plaque formation; well trimmed 8.1 Blood Vessel Artery - Coronary 0001621 337 942 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993152 338374 0.969202 0.994672 0.808356 24118 1 76 0.0026694 277 0 1.00676e+08 0.0303988 413818 1.01215e+08 6.96034e+06 24149 5.01514e+07 0 0.160845 0.994672 0.80405 1.00676e+08 0.00431207 2.15961e+07 1.11763e+07 2.18243e+07 274 2.18339e+07 1.87505e+07 0.00348948 2.17338e+07 49.8851 0.00408851 0.996192 0 50.2628 GTEX-1HC8U-0626-SM-B2LWB 1 B1 2 pieces; 1 piece has 50% fat content, internal and external 6.9 Heart Heart - Atrial Appendage 0006631 339 940 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992094 476989 0.972598 0.993891 0.793361 22591 1 76 0.00329279 133 0 7.07935e+07 0.0272217 1.23904e+06 7.12287e+07 2.91478e+06 22610 3.52312e+07 0 0.179236 0.993891 0.788514 7.07935e+07 0.00467234 1.49096e+07 8.35688e+06 1.51939e+07 159 1.5179e+07 9.63787e+06 0.00398132 1.50298e+07 49.7529 0.0173952 0.995687 0 50.4723 GTEX-1HC8U-0726-SM-ACKXL 1 B1 2 pieces; small foci of interstitial fibrosis 7.4 Heart Heart - Left Ventricle 0006566 347 932 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.99256 343357 0.981184 0.994296 0.822375 23084 1 76 0.00384852 271 0 1.37824e+08 0.0186147 3.53888e+06 1.38615e+08 1.79282e+07 23110 6.8653e+07 0 0.158809 0.994296 0.817684 1.37824e+08 0.00481834 2.9888e+07 3.15969e+07 3.02371e+07 318 3.02584e+07 2.006e+07 0.00433258 3.00913e+07 49.8615 0.0255303 0.996033 0 50.2904 GTEX-1HC8U-0826-SM-ADEIL 1 B1 2 pieces; ductal and lobular units present in a fibrofatty stroma 5.9 Breast Breast - Mammary Tissue 0008367 353 926 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981159 381233 0.975492 0.98793 0.814422 25230 1 76 0.00387661 279 0 1.12533e+08 0.0240841 817762 1.13907e+08 1.2267e+07 25268 5.57467e+07 0 0.16107 0.98793 0.804592 1.12533e+08 0.00433736 2.44629e+07 1.38317e+07 2.48902e+07 293 2.51977e+07 1.95274e+07 0.00410541 2.48375e+07 49.64 0.00717919 0.994701 0 50.4329 GTEX-1HC8U-0926-SM-A9G3L 1 B1 2 pieces; <5% fibrous content 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 356 923 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984767 259975 0.979432 0.990759 0.831752 23457 1 76 0.00425244 272 0 1.00648e+08 0.0203008 770106 1.01587e+08 8.9839e+06 23483 4.9932e+07 0 0.147679 0.990759 0.824066 1.00648e+08 0.00452882 2.22698e+07 1.15828e+07 2.25168e+07 261 2.27217e+07 1.73288e+07 0.00438799 2.26133e+07 49.8805 0.00758077 0.996751 0 50.2757 GTEX-1HC8U-1026-SM-A8N9Z 1 B1 2 pieces; well preserved; moderate fibrosis and loss of exocrine tissue 7.4 Pancreas Pancreas 0001150 359 920 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986506 250088 0.974231 0.988933 0.796924 23931 1 76 0.0104061 118 0 7.24343e+07 0.0255784 389315 7.32449e+07 1.16792e+07 23955 3.60048e+07 0 0.177307 0.988933 0.788105 7.24343e+07 0.0112362 1.62391e+07 1.1066e+07 1.63722e+07 117 1.64595e+07 1.5897e+07 0.0108201 1.63311e+07 49.8041 0.00531525 0.991361 0 50.2042 GTEX-1HC8U-1126-SM-COH35 1 B1 6 pieces; mild plaque formation 6.9 Blood Vessel Artery - Aorta 0001496 365 914 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991845 279527 0.976081 0.993167 0.829194 22315 1 76 0.00371843 153 0 7.25247e+07 0.0234837 279048 7.30237e+07 7.69731e+06 22335 3.61144e+07 0 0.146887 0.993167 0.823528 7.25247e+07 0.00467624 1.56266e+07 6.30508e+06 1.56863e+07 158 1.56727e+07 1.44142e+07 0.0041967 1.57402e+07 50.1075 0.00382134 0.994489 0 50.0953 GTEX-1HC8U-1226-SM-9WYUW 1 B1 2 pieces; smaller piece has 30% fibrous content 6.5 Thyroid Thyroid 0002046 367 912 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.99301 207921 0.959885 0.99414 0.710344 25294 1 76 0.00306609 163 0 8.69946e+07 0.0398801 475346 8.75075e+07 6.16488e+06 25342 4.33342e+07 0 0.249541 0.99414 0.706181 8.69946e+07 0.00478439 1.87896e+07 8.90802e+06 1.89759e+07 188 1.89454e+07 1.06966e+07 0.00392426 1.8912e+07 49.9559 0.00543206 0.995269 0 50.2466 GTEX-1HC8U-1326-SM-9YFMJ 1 B1 6 pieces; 10% dermal fat 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 374 905 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993441 319922 0.97428 0.994772 0.798109 24158 1 76 0.00272764 223 0 9.01755e+07 0.0254626 426887 9.06493e+07 3.15506e+06 24191 4.49343e+07 0 0.176171 0.994772 0.793937 9.01755e+07 0.00393929 1.9661e+07 9.12599e+06 1.98269e+07 217 1.98488e+07 1.61345e+07 0.00333266 1.97551e+07 49.8816 0.00470921 0.996104 0 50.21 GTEX-1HC8U-1526-SM-9WPO4 1 B1 6 pieces; well dissected squamous mucosa 9.3 Esophagus Esophagus - Mucosa 0006920 387 892 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987913 225240 0.974538 0.989471 0.772222 23440 1 76 0.00643314 128 0 7.31311e+07 0.0251688 344431 7.39093e+07 1.05269e+07 23464 3.64197e+07 0 0.202317 0.989471 0.764091 7.31311e+07 0.00671429 1.63886e+07 9.61338e+06 1.6453e+07 133 1.65101e+07 1.34736e+07 0.00657349 1.64424e+07 49.8973 0.00466018 0.99103 0 50.098 GTEX-1HC8U-1626-SM-CNPPG 1 B1 6 pieces, 1 is all fibrovascular tissue; others have up to 10% fibrous content 6.2 Esophagus Esophagus - Muscularis 0004648 392 887 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983775 224586 0.969383 0.987081 0.773478 24225 1 76 0.00622395 140 0 7.52951e+07 0.0303996 952320 7.62805e+07 1.926e+07 24256 3.74137e+07 0 0.195905 0.987081 0.763486 7.52951e+07 0.00954826 1.62231e+07 9.00719e+06 1.64081e+07 147 1.64477e+07 1.10373e+07 0.00788054 1.64161e+07 49.952 0.0124844 0.990388 0 50.2835 GTEX-1HC8U-1726-SM-A9SMF 1 B1 6 pieces; up to 10% fibrous content 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 397 882 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.99025 212157 0.975146 0.991705 0.810842 22169 1 76 0.00677357 119 0 5.76218e+07 0.024577 347300 5.81038e+07 1.02325e+07 22192 2.86829e+07 0 0.164304 0.991705 0.804116 5.76218e+07 0.00811896 1.25483e+07 5.62026e+06 1.2658e+07 114 1.26471e+07 1.03384e+07 0.00744528 1.26419e+07 49.9897 0.00597724 0.99316 0 50.2177 GTEX-1HC8U-2626-SM-CNPPH 1 B1 2 pieces; 1 piece contains 25% tendon & 10% fat; other has 10% fat 6.1 Muscle Muscle - Skeletal 0011907 454 825 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986168 287729 0.97645 0.989045 0.822293 22220 1 76 0.00665241 155 0 8.51414e+07 0.0233951 2.03505e+06 8.60845e+07 2.17967e+07 22246 4.23446e+07 0 0.154157 0.989045 0.813284 8.51414e+07 0.00907867 1.82303e+07 1.56429e+07 1.87595e+07 172 1.88645e+07 1.20285e+07 0.00786201 1.83375e+07 49.2918 0.0236402 0.991921 0 50.7153 GTEX-1HC8U-5019-SM-AN47M B1 Muscle Muscle - Skeletal 0011907 454 ChIP-Seq GTEX-1HCU6-0002-SM-EYYW4 C1 9.1 Blood Cells - EBV-transformed lymphocytes EFO_0000572 993 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988165 521520 0.969649 0.991265 0.82761 19964 1 76 0.00249451 121 0 5.78497e+07 0.0293923 293697 5.83595e+07 2.22262e+06 19982 2.87369e+07 0 0.142039 0.991265 0.82038 5.78497e+07 0.00329486 1.28417e+07 7.26452e+06 1.29372e+07 119 1.29897e+07 1.37034e+07 0.00289344 1.29653e+07 49.9529 0.00503255 0.994365 0 50.1853 GTEX-1HCU6-0004-SM-AG5YG C1 Blood Whole Blood 0013756 993 BP-57960 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/10/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCU6-0005-SM-AHZ28 C1 8.3 Blood Whole Blood 0013756 993 BP-57961 RNA isolation_PAXgene Blood RNA (Manual) 11/10/2014 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.990838 743371 0.969235 0.992748 0.757193 19399 1 76 0.00236711 201 0 9.89309e+07 0.0301563 272836 9.96536e+07 3.73362e+06 19423 4.92325e+07 0 0.212042 0.992748 0.751702 9.89309e+07 0.00326244 2.19636e+07 5.83932e+07 2.22505e+07 221 2.22842e+07 1.88298e+07 0.00281391 2.21232e+07 49.8187 0.00273784 0.994658 0 50.3245 GTEX-1HCU6-0011-R10a-SM-CKZP8 C1, A1 6 Brain Brain - Frontal Cortex (BA9) 0009834 1007 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991325 395591 0.968566 0.993643 0.867572 23898 1 76 0.00211646 375 0 1.02334e+08 0.0311331 5.64274e+06 1.02988e+08 9.34294e+06 23915 5.09617e+07 0 0.100994 0.993643 0.862056 1.02334e+08 0.0036431 2.23198e+07 1.50594e+07 2.28143e+07 352 2.27125e+07 1.12881e+07 0.002878 2.26047e+07 49.881 0.05479 0.995961 0 50.5478 GTEX-1HCU6-0011-R11b-SM-AHZ2F C1, A1 6.5 Brain Brain - Cerebellar Hemisphere 0002037 1007 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988194 739522 0.948362 0.989831 0.752821 25566 1 76 0.00687872 271 0 1.36212e+08 0.0512164 2.55218e+06 1.37611e+08 2.29565e+07 25617 6.77501e+07 0 0.195541 0.989831 0.745166 1.36212e+08 0.00845639 2.92441e+07 2.29353e+07 2.9429e+07 324 2.94162e+07 1.55914e+07 0.00766625 2.94443e+07 50.0239 0.0185463 0.991468 0 50.1576 GTEX-1HCU6-0011-R3a-SM-ARU75 C1, A1 6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1007 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993022 884022 0.950321 0.994418 0.828283 23085 1 76 0.00224789 266 0 7.86367e+07 0.0494154 5.21951e+06 7.90782e+07 2.73741e+06 23096 3.91763e+07 0 0.122038 0.994418 0.823659 7.86367e+07 0.00286265 1.68465e+07 2.9104e+07 1.71543e+07 280 1.7112e+07 7.02172e+06 0.00255484 1.69933e+07 49.826 0.0660045 0.995814 0 50.4526 GTEX-1HCU6-0011-R4b-SM-ARU74 C1, A1 6 Brain Brain - Amygdala 0001876 1007 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.99135 435890 0.964597 0.992592 0.852926 22848 1 76 0.00221739 271 0 7.80149e+07 0.0351321 4.21968e+06 7.85971e+07 2.65795e+06 22866 3.88781e+07 0 0.111672 0.992592 0.846607 7.80149e+07 0.00279824 1.69929e+07 1.35829e+07 1.73458e+07 278 1.72159e+07 8.0673e+06 0.00250745 1.71944e+07 49.9688 0.0536875 0.993835 0 50.5138 GTEX-1HCU6-0011-R5a-SM-ARU76 C1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 1007 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993001 517101 0.966275 0.994495 0.840301 21362 1 76 0.00243529 265 0 7.15515e+07 0.0335844 5.84949e+06 7.19476e+07 2.44012e+06 21371 3.56533e+07 0 0.125974 0.994495 0.835676 7.15515e+07 0.00313827 1.52447e+07 2.80821e+07 1.57941e+07 269 1.55636e+07 4.62606e+06 0.00278626 1.55532e+07 49.9833 0.0813021 0.995989 0 50.885 GTEX-1HCU6-0011-R7b-SM-ARL77 C1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1007 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990096 814587 0.9528 0.989867 0.819685 23236 1 76 0.0021592 280 0 7.81702e+07 0.0469067 5.19082e+06 7.89705e+07 5.00251e+06 23266 3.88926e+07 0 0.133116 0.989867 0.811379 7.81702e+07 0.00255037 1.68709e+07 1.78746e+07 1.73377e+07 262 1.74199e+07 9.10399e+06 0.00235483 1.6751e+07 49.0212 0.0657311 0.989637 0 50.6824 GTEX-1HCU6-0011-R8a-SM-CJI3R C1, A1 6.1 Brain Brain - Hypothalamus 0001898 1007 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992146 499479 0.974537 0.993655 0.868693 22910 1 76 0.00223238 371 0 9.88796e+07 0.0252512 7.20806e+06 9.95109e+07 5.75966e+06 22924 4.92419e+07 0 0.105843 0.993655 0.863182 9.88796e+07 0.00304067 2.14706e+07 2.10904e+07 2.23083e+07 400 2.20765e+07 8.93978e+06 0.00263591 2.18073e+07 49.6932 0.0724349 0.995165 0 50.9567 GTEX-1HCU6-0126-SM-CL54K 1 C1 6 pieces; upp to 20% dermal fat; well trimmed 8.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1081 1146 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991834 477816 0.977134 0.993676 0.82363 23940 1 76 0.00264323 244 0 9.85861e+07 0.0224999 502181 9.92135e+07 1.26014e+07 23968 4.90662e+07 0 0.153504 0.993676 0.818422 9.85861e+07 0.00440596 2.15361e+07 1.13232e+07 2.1691e+07 241 2.17432e+07 1.81838e+07 0.00352296 2.16587e+07 49.9027 0.00506162 0.995519 0 50.1791 GTEX-1HCU6-0226-SM-CGQES 1 C1 2 pieces; <5% fibrous content 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1083 1144 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99337 480139 0.974961 0.994889 0.807545 25828 1 76 0.00387536 388 0 1.86615e+08 0.0245451 1.34306e+06 1.87574e+08 1.31834e+07 25890 9.29848e+07 0 0.167416 0.994889 0.803418 1.86615e+08 0.00369656 4.08981e+07 1.91133e+07 4.13737e+07 419 4.13717e+07 2.75234e+07 0.00379086 4.11128e+07 49.8431 0.00716015 0.996409 0 50.289 GTEX-1HCU6-0326-SM-CGQET 1 C1 2 pieces; <5% fat; well trimmed 7 Nerve Nerve - Tibial 0001323 1087 1141 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991734 386378 0.963573 0.993152 0.743735 27162 1 76 0.00382072 390 0 1.7119e+08 0.036169 667854 1.7237e+08 1.0825e+07 27244 8.52977e+07 0 0.219838 0.993152 0.738642 1.7119e+08 0.00358089 3.73609e+07 1.70595e+07 3.75511e+07 404 3.74826e+07 2.36605e+07 0.00370735 3.76173e+07 50.0896 0.00387453 0.994569 0 50.1269 GTEX-1HCU6-0426-SM-CM2SI 1 C1 2 pieces; well trimmed except for a 1.4 x 0.4mm external fat nodule 7.5 Blood Vessel Artery - Tibial 0007610 1089 1139 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992839 338328 0.97107 0.994153 0.769745 23144 1 76 0.00211576 210 0 9.5065e+07 0.0286058 399034 9.56241e+07 5.63279e+06 23185 4.73346e+07 0 0.201325 0.994153 0.765244 9.5065e+07 0.00291677 2.05494e+07 7.72664e+06 2.06443e+07 241 2.06718e+07 1.54546e+07 0.00251573 2.0639e+07 49.9603 0.00417294 0.995467 0 50.1152 GTEX-1HCU6-0526-SM-A9SKU 0 C1 2 pieces; no fat content 7.9 Muscle Muscle - Skeletal 0011907 1090 1138 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990955 431917 0.984699 0.992307 0.865477 20962 1 76 0.00643179 272 0 1.29726e+08 0.0150028 1.35438e+06 1.30732e+08 2.31031e+07 20975 6.46353e+07 0 0.119222 0.992307 0.858819 1.29726e+08 0.00756901 2.78959e+07 2.24484e+07 2.82205e+07 302 2.81868e+07 2.54319e+07 0.00699963 2.80523e+07 49.8805 0.01036 0.993659 0 50.2892 GTEX-1HCU6-1026-SM-A9G25 1 C1 2 pieces; several small foci of fibrosis 6.4 Heart Heart - Left Ventricle 0006566 1097 1134 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846,LCSET-8170 11/17/2015 TruSeq.v1 RNASEQ 0.985832 170621 0.986108 0.990722 0.854499 19492 1 76 0.00219136 368 0 1.03781e+08 0.0138185 6.01296e+06 1.04753e+08 5.49587e+06 19503 5.1573e+07 0 0.131609 0.990722 0.846572 1.03781e+08 0.00317199 2.28455e+07 3.76625e+07 2.23414e+07 346 2.23891e+07 7.65271e+06 0.00267923 2.31846e+07 50.8728 0.0574013 0.995613 0 49.4423 GTEX-1HCU6-1326-SM-A96TZ 2 C1 6 pieces; moderately sloughed epithelium; engorged blood vessels 6.2 Esophagus Esophagus - Mucosa 0006920 1101 1131 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993006 216170 0.97517 0.994323 0.810863 22170 1 76 0.00205829 157 0 7.44518e+07 0.0246638 350080 7.48768e+07 2.48913e+06 22191 3.7113e+07 0 0.164307 0.994323 0.80626 7.44518e+07 0.00241109 1.66445e+07 7.9011e+06 1.68883e+07 193 1.68619e+07 1.16492e+07 0.00223446 1.67636e+07 49.8539 0.00467541 0.995641 0 50.3634 GTEX-1HCU6-1626-SM-CMKGW 1 C1 2 pieces: 1 with 10% fibrous content 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1104 1130 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994451 355815 0.975462 0.99525 0.787736 23484 1 76 0.00218186 211 0 9.26101e+07 0.0242666 268382 9.30521e+07 6.23405e+06 23519 4.61588e+07 0 0.187727 0.99525 0.783994 9.26101e+07 0.00285336 2.03448e+07 1.09854e+07 2.04949e+07 235 2.04836e+07 1.54844e+07 0.00251734 2.04368e+07 49.9428 0.00288421 0.99605 0 50.1837 GTEX-1HCU6-1826-SM-C1YRN 2 C1 2 pieces; well trimmed 6.7 Adrenal Gland Adrenal Gland 0002369 1107 1127 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98781 1.07911e+06 0.9599 0.990826 0.761544 21424 1 76 0.0020649 263 0 9.05503e+07 0.0398838 2.87564e+06 9.13887e+07 4.09793e+06 21455 4.50147e+07 0 0.198356 0.990826 0.754557 9.05503e+07 0.00266914 1.90701e+07 2.41519e+07 1.9475e+07 257 1.95359e+07 1.04108e+07 0.0023661 1.92552e+07 49.6382 0.031466 0.993842 0 50.5252 GTEX-1HCU6-1926-SM-A8NA6 2 C1 2 pieces; <5% fat 5.9 Pancreas Pancreas 0001150 1108 1127 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984121 264320 0.971954 0.987061 0.80399 21738 1 76 0.0111573 101 0 8.45093e+07 0.0276943 379030 8.56171e+07 1.57608e+07 21758 4.19781e+07 0 0.167964 0.987061 0.793587 8.45093e+07 0.0121377 1.92289e+07 3.05928e+07 1.96205e+07 108 1.95947e+07 2.32358e+07 0.0116461 1.95102e+07 49.8919 0.00442704 0.990001 0 50.504 GTEX-1HCU6-2026-SM-A8NA7 1 C1 2 pieces; no active or chronic lesions 6.3 Liver Liver 0001114 1110 1125 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.98492 239966 0.973786 0.987932 0.804349 21205 1 76 0.0110194 133 0 6.9487e+07 0.0260613 1.10671e+06 7.03358e+07 1.26782e+07 21225 3.45149e+07 0 0.169437 0.987932 0.794642 6.9487e+07 0.0118464 1.51041e+07 1.23119e+07 1.54991e+07 153 1.55615e+07 7.51627e+06 0.0114317 1.52195e+07 49.4445 0.0157347 0.990944 0 50.6453 GTEX-1HCU6-2326-SM-ACKXP 1 C1 6 pieces; preserved epithelium 7.1 Vagina Vagina 0000996 1113 1124 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991426 324070 0.963376 0.992848 0.678793 26486 1 76 0.00307655 279 0 1.0921e+08 0.0363608 261935 1.09996e+08 1.40066e+07 26566 5.43673e+07 0 0.284582 0.992848 0.673938 1.0921e+08 0.00373879 2.39704e+07 1.21522e+07 2.41493e+07 266 2.41832e+07 1.55682e+07 0.0034072 2.40894e+07 49.9028 0.00238131 0.994269 0 50.1859 GTEX-1HCU6-2426-SM-A8N85 2 C1 2 pieces; atrophic endometrium and adenomyosis 6.1 Uterus Uterus 0000995 1115 1122 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986668 316058 0.956257 0.988615 0.692366 25704 1 76 0.0109267 161 0 9.59372e+07 0.0435317 186593 9.70419e+07 1.58545e+07 25762 4.76827e+07 0 0.263891 0.988615 0.684484 9.59372e+07 0.0103976 2.06667e+07 1.17554e+07 2.08904e+07 165 2.09237e+07 1.33432e+07 0.0106626 2.08207e+07 49.8767 0.00192281 0.990563 0 50.2692 GTEX-1HCU6-2526-SM-ADEHL 1 C1 6 pieces; well trimmed; up to 20% dermal fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1116 1122 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981964 334570 0.976408 0.988452 0.78735 24173 1 76 0.0036187 283 0 9.67996e+07 0.0232675 388465 9.79305e+07 1.05107e+07 24221 4.79531e+07 0 0.189059 0.988452 0.778258 9.67996e+07 0.00357178 2.11401e+07 1.25876e+07 2.1402e+07 262 2.16594e+07 1.66683e+07 0.0035954 2.14436e+07 49.7497 0.00396674 0.994941 0 50.3077 GTEX-1HCU6-2726-SM-A9SKV 2 C1 6 pieces; mucosa largely autolyzed; muscularis intact 6.2 Colon Colon - Transverse 0001157 1120 1119 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.989656 293420 0.969532 0.991352 0.796073 23399 1 76 0.0055954 132 0 6.77435e+07 0.0302254 407412 6.83345e+07 1.0047e+07 23421 3.37112e+07 0 0.173458 0.991352 0.789189 6.77435e+07 0.00704065 1.45605e+07 6.50864e+06 1.46838e+07 143 1.46913e+07 1.04821e+07 0.00631679 1.46627e+07 49.9513 0.00596203 0.993047 0 50.2108 GTEX-1HCU6-2926-SM-B2LWV 1 C1 6 pieces; well dissected muscularis with up to 20% submucosal fibrofatty tissue 5.7 Colon Colon - Sigmoid 0001159 1123 1117 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991465 228626 0.967738 0.992972 0.791605 22434 1 76 0.00256457 127 0 5.6903e+07 0.0320493 615660 5.73058e+07 2.61947e+06 22452 2.83177e+07 0 0.176133 0.992972 0.786041 5.6903e+07 0.00393122 1.22302e+07 5.18e+06 1.23901e+07 144 1.23835e+07 7.66764e+06 0.00324686 1.23191e+07 49.8695 0.0107434 0.99448 0 50.3246 GTEX-1HCU6-3126-SM-CL54L 1 C1 4 pieces 6.9 Brain Brain - Cortex 0001870 1141 1100 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993592 670063 0.968082 0.994952 0.823924 26459 1 76 0.00270287 375 0 1.45335e+08 0.0315269 5.08557e+06 1.46072e+08 1.82786e+07 26497 7.24003e+07 0 0.144158 0.994952 0.819765 1.45335e+08 0.00354245 3.17495e+07 1.92653e+07 3.24755e+07 369 3.24355e+07 1.79884e+07 0.00312209 3.1946e+07 49.6198 0.0348154 0.996313 0 50.5652 GTEX-1HCU6-3226-SM-CNNQ8 2 C1 1 piece 6.3 Pituitary Pituitary 0000007 1141 1100 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991981 331156 0.960716 0.993882 0.763239 25555 1 76 0.00260009 270 0 9.94802e+07 0.039104 906109 1.00092e+08 1.06065e+07 25607 4.95439e+07 0 0.197476 0.993882 0.75857 9.94802e+07 0.00365609 2.14403e+07 1.46034e+07 2.18839e+07 298 2.18741e+07 1.16947e+07 0.00312708 2.16234e+07 49.7118 0.00905272 0.995783 0 50.512 GTEX-1HCU7-0001-SM-EZ6LZ B1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -1114 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989593 1.02131e+06 0.966195 0.991218 0.795122 23009 1 76 0.00265923 287 0 1.24416e+08 0.0331851 712670 1.25519e+08 8.57536e+06 23043 6.19579e+07 0 0.171074 0.991218 0.788139 1.24416e+08 0.00384437 2.75968e+07 2.01517e+07 2.77501e+07 307 2.78234e+07 2.89731e+07 0.00325083 2.77125e+07 49.9001 0.0056778 0.992843 0 50.1385 GTEX-1HCU7-0003-SM-AG5YC B1 Blood Whole Blood 0013756 -1114 BP-57960 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/10/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCU7-0006-SM-A9G19 B1 8.1 Blood Whole Blood 0013756 -1114 BP-57961 RNA isolation_PAXgene Blood RNA (Manual) 11/10/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.979749 743109 0.957517 0.9865 0.791491 19500 1 76 0.00415826 109 0 7.03158e+07 0.0407355 128231 7.1278e+07 5.78738e+06 19509 3.4782e+07 0 0.166026 0.9865 0.780806 7.03158e+07 0.00556103 1.55856e+07 6.65064e+07 1.57395e+07 119 1.59293e+07 1.49743e+07 0.00484565 1.58696e+07 49.9062 0.00179903 0.993251 0 50.2457 GTEX-1HCU7-0126-SM-C1YR3 1 B1 2 pieces; well dissected glands, but large amount (50-60%) of extraneous lip, muscle & nerve [circled] 9.1 Salivary Gland Minor Salivary Gland 0006330 395 1050 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989882 814849 0.975274 0.99241 0.783293 22909 1 76 0.00195594 201 0 9.47879e+07 0.024428 268607 9.55128e+07 4.45198e+06 22935 4.71464e+07 0 0.191981 0.99241 0.777348 9.47879e+07 0.00246496 2.14184e+07 1.3802e+07 2.14141e+07 209 2.15342e+07 1.87285e+07 0.0022098 2.15245e+07 49.9887 0.00281226 0.994937 0 49.995 GTEX-1HCU7-0226-SM-CL545 1 B1 6 pieces; up to 20% dermal/subcutaneous fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 400 1045 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991306 407201 0.974655 0.992888 0.7903 22519 1 76 0.0026947 194 0 7.58885e+07 0.0250673 341547 7.6432e+07 1.04755e+07 22548 3.77747e+07 0 0.184355 0.992888 0.78468 7.58885e+07 0.00377638 1.65299e+07 7.96544e+06 1.65893e+07 169 1.66533e+07 1.36108e+07 0.00323468 1.65839e+07 49.8956 0.00446864 0.994471 0 50.0896 GTEX-1HCU7-0326-SM-CMKGI 1 B1 2 pieces; 10 & 20% fibrous content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 403 1042 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994607 325947 0.977786 0.99563 0.799633 23262 1 76 0.00220003 275 0 9.74802e+07 0.0218908 605729 9.7908e+07 7.62168e+06 23300 4.85854e+07 0 0.178153 0.99563 0.796138 9.74802e+07 0.00269578 2.15001e+07 8.65701e+06 2.16763e+07 260 2.1701e+07 1.75122e+07 0.00244765 2.15764e+07 49.8561 0.00618672 0.996653 0 50.204 GTEX-1HCU7-0426-SM-D3L8Q 1 B1 2 pieces; 5% internal fat in 1 piece 8.9 Muscle Muscle - Skeletal 0011907 407 1038 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.9924 515045 0.984063 0.994414 0.868515 21844 1 76 0.00240634 395 0 1.58551e+08 0.0155428 2.21047e+06 1.59442e+08 1.5337e+07 21865 7.89697e+07 0 0.115548 0.994414 0.863663 1.58551e+08 0.00331107 3.47549e+07 1.60823e+07 3.51614e+07 357 3.52665e+07 3.10615e+07 0.00285779 3.49366e+07 49.765 0.0138638 0.996427 0 50.2907 GTEX-1HCU7-0526-SM-CGQFF 1 B1 2 pieces; 10% internal fat 6.7 Nerve Nerve - Tibial 0001323 418 1027 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991724 388775 0.96643 0.993336 0.727481 26570 1 76 0.00392317 398 0 1.59704e+08 0.0333126 508951 1.60775e+08 1.21833e+07 26652 7.95396e+07 0 0.238948 0.993336 0.722633 1.59704e+08 0.00374932 3.51557e+07 1.4851e+07 3.53013e+07 403 3.52714e+07 2.22629e+07 0.003841 3.5391e+07 50.0846 0.00316561 0.994947 0 50.1033 GTEX-1HCU7-0626-SM-ADEHO 1 B1 2 pieces; minimal intimal thickening 6 Blood Vessel Artery - Tibial 0007610 415 1030 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980359 403031 0.974973 0.987299 0.805105 21245 1 76 0.00335804 145 0 7.02741e+07 0.0246552 503659 7.11781e+07 7.05264e+06 21264 3.4773e+07 0 0.169868 0.987299 0.794879 7.02741e+07 0.00403075 1.51055e+07 5.5196e+06 1.52802e+07 155 1.54599e+07 1.26411e+07 0.00369203 1.53623e+07 49.8417 0.00707603 0.994239 0 50.2875 GTEX-1HCU7-0726-SM-A9SL1 1 B1 6 pieces; well trimmed; 5% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 422 1023 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989438 381019 0.975467 0.99092 0.766963 23106 1 76 0.00674884 185 0 8.59186e+07 0.0242884 619244 8.67059e+07 1.61919e+07 23138 4.2779e+07 0 0.208504 0.99092 0.76 8.59186e+07 0.00791443 1.8844e+07 1.17825e+07 1.88241e+07 162 1.88463e+07 1.40502e+07 0.00733076 1.89476e+07 50.134 0.00714189 0.992403 0 49.9737 GTEX-1HCU7-0826-SM-B2LX7 1 B1 2 pieces; 5% fibrofatty content 6.7 Thyroid Thyroid 0002046 425 1020 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990509 505212 0.954554 0.992108 0.705508 23325 1 76 0.00258986 120 0 5.90604e+07 0.0451966 263347 5.95302e+07 2.94546e+06 23359 2.93747e+07 0 0.249046 0.992108 0.69994 5.90604e+07 0.00384383 1.27537e+07 9.53572e+06 1.28163e+07 127 1.28648e+07 8.81776e+06 0.00321584 1.27995e+07 49.8729 0.00442375 0.993706 0 50.1225 GTEX-1HCU7-0926-SM-A96TK 2 B1 2 pieces; patchy pneumonia; numerous intraalveolar pigmented macrophages; mild to moderate interstitial fibrosis 6.3 Lung Lung 0008952 427 1018 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991894 189170 0.974455 0.993148 0.764143 23720 1 76 0.00240921 140 0 7.25879e+07 0.0248176 199487 7.30887e+07 2.58663e+06 23747 3.61449e+07 0 0.210311 0.993148 0.758907 7.25879e+07 0.00277061 1.6033e+07 8.52404e+06 1.61774e+07 159 1.61819e+07 1.2338e+07 0.00258968 1.61164e+07 49.8986 0.00272938 0.994402 0 50.2241 GTEX-1HCU7-1026-SM-ADEIP 1 B1 2 pieces; fibrofatty tissue with no obvious mammary ducts 6.5 Breast Breast - Mammary Tissue 0008367 433 1012 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981295 400922 0.978952 0.987896 0.79892 23355 1 76 0.00346454 275 0 1.0603e+08 0.0207569 1.15288e+06 1.07329e+08 1.12344e+07 23394 5.25314e+07 0 0.180033 0.987896 0.78925 1.0603e+08 0.00357394 2.32705e+07 1.29961e+07 2.37444e+07 297 2.40078e+07 1.75009e+07 0.00351888 2.36377e+07 49.6117 0.0107416 0.994498 0 50.504 GTEX-1HCU7-1226-SM-B2LX8 1 B1 2 pieces; minimal extraneous tissue 6.6 Heart Heart - Atrial Appendage 0006631 445 1000 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.985079 988683 0.981901 0.988726 0.830924 20915 1 76 0.00267931 154 0 6.79873e+07 0.0179635 3.43925e+06 6.87626e+07 2.98202e+06 20931 3.36727e+07 0 0.150978 0.988726 0.821556 6.79873e+07 0.00416642 1.48011e+07 1.1857e+07 1.50395e+07 197 1.51431e+07 6.70041e+06 0.00342012 1.49037e+07 49.6017 0.0500163 0.992373 0 50.3994 GTEX-1HCU7-1326-SM-CNPPW 1 B1 2 pieces; mild focal increase in fibrous tissue 6.6 Heart Heart - Left Ventricle 0006566 448 997 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983444 226010 0.987375 0.986422 0.840833 20760 1 76 0.0060291 369 0 1.27103e+08 0.0124109 8.03334e+06 1.28853e+08 3.2132e+07 20769 6.32382e+07 0 0.146542 0.986422 0.829416 1.27103e+08 0.00901571 2.72599e+07 6.77509e+07 2.83645e+07 341 2.84939e+07 8.0591e+06 0.0075179 2.73906e+07 49.0129 0.0623451 0.9894 0 50.9929 GTEX-1HCU7-1426-SM-CNNQK 2 B1 2 pieces; partially fragmented 5.6 Spleen Spleen 0002106 453 992 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.988939 283828 0.958703 0.991058 0.755881 23816 1 76 0.00329714 160 0 8.48318e+07 0.0389289 704340 8.55972e+07 9.35038e+06 23851 4.21144e+07 0 0.202822 0.991058 0.749122 8.48318e+07 0.0048275 1.85573e+07 1.68495e+07 1.87326e+07 201 1.87708e+07 1.0707e+07 0.00406068 1.86922e+07 49.895 0.00822854 0.993177 0 50.235 GTEX-1HCU7-1526-SM-CM2S6 1 B1 2 pieces; mild plaque, patent lumen; 20% external fat 5.9 Blood Vessel Artery - Coronary 0001621 459 986 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99238 335361 0.972458 0.993619 0.774856 23173 1 76 0.00219052 208 0 8.97953e+07 0.0272565 606744 9.03719e+07 5.53171e+06 23206 4.47017e+07 0 0.197602 0.993619 0.769912 8.97953e+07 0.00299754 1.96418e+07 8.64694e+06 1.97638e+07 221 1.9796e+07 1.42804e+07 0.00259353 1.97217e+07 49.9061 0.00671385 0.994857 0 50.1548 GTEX-1HCU7-1726-SM-B2LX9 1 B1 2 pieces; no active or chronic lesions 5.6 Liver Liver 0001114 469 976 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99141 348840 0.973871 0.993154 0.839363 19701 1 76 0.00265401 140 0 6.16877e+07 0.025374 1.44489e+06 6.21129e+07 2.90348e+06 19710 3.06757e+07 0 0.134508 0.993154 0.833617 6.16877e+07 0.0037262 1.34441e+07 9.86577e+06 1.36712e+07 167 1.36447e+07 8.3114e+06 0.00318916 1.3566e+07 49.8555 0.0232623 0.994898 0 50.4187 GTEX-1HCU7-1826-SM-A9G2A 2 B1 6 pieces; scattered arteriolar sclerosis & interstitial fibrosis 5.8 Kidney Kidney - Cortex 0001225 477 968 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986131 197082 0.976241 0.991399 0.838101 22415 1 76 0.00448555 264 0 7.87128e+07 0.0236436 4.12668e+06 7.93957e+07 7.72427e+06 22434 3.90818e+07 0 0.13814 0.991399 0.830892 7.87128e+07 0.00445112 1.73314e+07 2.07116e+07 1.78406e+07 258 1.79451e+07 5.84838e+06 0.00446865 1.75604e+07 49.4581 0.0519762 0.996666 0 50.7238 GTEX-1HCU7-2026-SM-A9G2B 1 B1 2 pieces; 5% fibrous content 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 488 957 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983549 227530 0.976318 0.989721 0.801463 23403 1 76 0.00388888 206 0 8.52115e+07 0.0233854 732249 8.60965e+07 8.05653e+06 23429 4.22488e+07 0 0.174855 0.989721 0.793224 8.52115e+07 0.00435776 1.86033e+07 1.1046e+07 1.88972e+07 210 1.90659e+07 1.38585e+07 0.00411881 1.89187e+07 49.8062 0.00850498 0.995892 0 50.3918 GTEX-1HCU7-2126-SM-A96SG 2 B1 6 pieces; chronic inflammation; considerable epithelial sloughing 7.8 Esophagus Esophagus - Mucosa 0006920 493 952 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992678 328814 0.97246 0.994102 0.772463 23143 1 76 0.00204288 204 0 8.66395e+07 0.0272267 423796 8.71535e+07 2.87895e+06 23164 4.31762e+07 0 0.199997 0.994102 0.767906 8.66395e+07 0.00248181 1.94396e+07 1.26798e+07 1.9649e+07 239 1.96781e+07 1.40531e+07 0.00226203 1.95279e+07 49.8085 0.00486264 0.995525 0 50.2678 GTEX-1HCU7-2226-SM-B2LXA 1 B1 6 pieces; well dissected; large adventitial artery in 1 piece (arrowed) 5.6 Esophagus Esophagus - Muscularis 0004648 498 947 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990804 296213 0.970832 0.992345 0.789612 22151 1 76 0.00257399 140 0 6.24391e+07 0.0289608 745032 6.29208e+07 3.02021e+06 22174 3.10643e+07 0 0.18122 0.992345 0.783567 6.24391e+07 0.00386027 1.35429e+07 5.58853e+06 1.36429e+07 154 1.3637e+07 9.05759e+06 0.00321613 1.36433e+07 50.0115 0.0118408 0.993885 0 50.184 GTEX-1HCU7-2426-SM-CKZOL 1 B1 6 pieces; focal submucosal stroma present 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 511 934 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991335 251841 0.971052 0.993196 0.768515 22753 1 76 0.00216411 151 0 7.47414e+07 0.0287201 604101 7.52534e+07 7.53545e+06 22781 3.72131e+07 0 0.202537 0.993196 0.763286 7.47414e+07 0.00326809 1.62558e+07 7.92525e+06 1.63195e+07 170 1.63481e+07 1.17282e+07 0.00271507 1.636e+07 50.0182 0.00802756 0.995057 0 50.0977 GTEX-1HCU7-2626-SM-C1YQO 2 B1 6 pieces; mucosa largely autolyzed, muscularis intact 6 Colon Colon - Transverse 0001157 521 924 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988087 510629 0.973113 0.990392 0.821569 23595 1 76 0.00191562 204 0 8.54303e+07 0.0265417 469040 8.62591e+07 4.19574e+06 23618 4.24956e+07 0 0.151544 0.990392 0.813676 8.54303e+07 0.00236458 1.85268e+07 7.78698e+06 1.86676e+07 216 1.86758e+07 1.5534e+07 0.00213958 1.87024e+07 50.0356 0.00543757 0.992698 0 50.1893 GTEX-1HCU7-2726-SM-A9G3D 1 B1 6 pieces; focal remnants of submucosa, but well dissected intact muscularis 6.4 Colon Colon - Sigmoid 0001159 533 912 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.987449 215524 0.969479 0.99152 0.787861 22853 1 76 0.00328093 146 0 7.44117e+07 0.0302579 579173 7.50481e+07 5.70911e+06 22885 3.69482e+07 0 0.181618 0.99152 0.78118 7.44117e+07 0.00390821 1.59119e+07 6.77634e+06 1.61209e+07 164 1.61866e+07 1.20198e+07 0.00359038 1.61231e+07 49.9018 0.00771735 0.995591 0 50.3262 GTEX-1HCU7-2926-SM-A8N9U 1 B1 2 pieces; spermatogenesis 6.4 Testis Testis 0000473 543 902 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984679 352336 0.91833 0.987006 0.709261 33501 1 76 0.0109517 152 0 8.68253e+07 0.0813191 566590 8.79684e+07 1.60116e+07 33573 4.31511e+07 0 0.209069 0.987006 0.700045 8.68253e+07 0.0109033 1.75191e+07 1.39834e+07 1.76652e+07 143 1.77441e+07 1.35728e+07 0.0109275 1.76239e+07 49.83 0.00644084 0.989333 0 50.2076 GTEX-1HCU7-5004-SM-AN478 B1 Muscle Muscle - Skeletal 0011907 409 ChIP-Seq GTEX-1HCU7-5010-SM-AN477 B1 Heart Heart - Left Ventricle 0006566 450 ChIP-Seq GTEX-1HCU8-0005-SM-A96RL C1 8.8 Blood Whole Blood 0013756 668 BP-57961 RNA isolation_PAXgene Blood RNA (Manual) 11/10/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991448 442091 0.970857 0.992816 0.739484 19528 1 76 0.00234612 115 0 7.56256e+07 0.0286205 98719 7.61729e+07 2.4865e+06 19549 3.76673e+07 0 0.231372 0.992816 0.734171 7.56256e+07 0.00290407 1.71112e+07 5.15758e+07 1.72113e+07 137 1.72754e+07 1.50565e+07 0.00262471 1.71555e+07 49.8259 0.00129599 0.994183 0 50.1459 GTEX-1HCU8-0008-SM-DMZ2E C1 Skin Cells - Cultured fibroblasts EFO_0002009 791 BP-75597 RNA isolation_Trizol Manual (Cell Pellet) 06/10/2016 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCU8-0126-SM-ADEHH 1 C1 2 pieces, mainly fibroadipose tissue; trace ductal/lobular units, storphic changes, rep delineated 6.2 Breast Breast - Mammary Tissue 0008367 771 651 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982016 470232 0.977564 0.988667 0.800614 23697 1 76 0.00352078 273 0 1.06366e+08 0.0221299 1.22134e+06 1.07586e+08 1.20517e+07 23725 5.26826e+07 0 0.17695 0.988667 0.791541 1.06366e+08 0.00353795 2.31217e+07 1.66574e+07 2.38442e+07 316 2.41433e+07 1.49963e+07 0.00352931 2.34549e+07 49.2769 0.0113522 0.995318 0 50.7692 GTEX-1HCU8-0626-SM-A9SM9 0 C1 6 pieces, no dermal fat; squamous epithelium is ~40 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 791 633 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989149 274623 0.971692 0.990781 0.752292 23786 1 76 0.00662414 166 0 7.84544e+07 0.0280994 727796 7.91843e+07 1.42417e+07 23815 3.90494e+07 0 0.219399 0.990781 0.745357 7.84544e+07 0.00814435 1.72156e+07 9.53386e+06 1.73478e+07 155 1.73395e+07 1.11559e+07 0.00738299 1.73444e+07 50.0069 0.00919116 0.992414 0 50.1914 GTEX-1HCU8-0726-SM-ADEIR 0 C1 2 pieces, fascia is ~10%, rep delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 792 632 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981909 356747 0.977399 0.98873 0.784343 22909 1 76 0.00328663 206 0 9.14444e+07 0.0223136 603180 9.24868e+07 9.17018e+06 22949 4.52954e+07 0 0.193056 0.98873 0.775503 9.14444e+07 0.00384486 2.002e+07 1.09895e+07 2.02956e+07 251 2.05252e+07 1.45943e+07 0.00356382 2.03508e+07 49.7866 0.0065218 0.99555 0 50.3419 GTEX-1HCU8-0926-SM-CM2S9 1 C1 6 pieces, atherosis up to ~0.3mm 7 Blood Vessel Artery - Aorta 0001496 795 630 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.991464 402348 0.973472 0.992895 0.73952 23640 1 76 0.00236191 213 0 9.74036e+07 0.0261476 333346 9.81006e+07 6.07584e+06 23685 4.84472e+07 0 0.233953 0.992895 0.734265 9.74036e+07 0.00305256 2.13234e+07 9.01482e+06 2.13392e+07 229 2.13922e+07 1.55323e+07 0.00270674 2.14067e+07 50.017 0.003398 0.994326 0 50.0185 GTEX-1HCU8-1126-SM-CM2SA 1 C1 2 pieces; fascia/vascular elements/adherent muscle (skeletal) are ~10-15% of tissue 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 797 629 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992325 351201 0.977666 0.993744 0.766825 23708 1 76 0.00221662 264 0 9.50619e+07 0.0220229 1.1943e+06 9.56603e+07 6.11518e+06 23747 4.73259e+07 0 0.210841 0.993744 0.762028 9.50619e+07 0.0031086 2.10619e+07 1.03338e+07 2.12328e+07 257 2.12631e+07 1.39736e+07 0.00266197 2.11628e+07 49.8818 0.0124848 0.995163 0 50.2021 GTEX-1HCU8-1326-SM-C1YQQ 2 C1 6 pieces, mucosa up to ~0.7mm, moderately-advanced autolysis 5.8 Stomach Stomach 0000945 800 627 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.986894 288980 0.975292 0.989337 0.793169 24457 1 76 0.0024292 293 0 9.16343e+07 0.0226113 2.28472e+06 9.26219e+07 4.31588e+06 24487 4.54902e+07 0 0.182123 0.989337 0.784711 9.16343e+07 0.00296771 2.06025e+07 2.26345e+07 2.08575e+07 279 2.08669e+07 1.37404e+07 0.00269779 2.07987e+07 49.9182 0.0246671 0.99178 0 50.3075 GTEX-1HCU8-1426-SM-ACKXG 0 C1 2 pieces, no adherent fat 5.7 Nerve Nerve - Tibial 0001323 802 625 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992077 267730 0.965304 0.993504 0.737502 25060 1 76 0.0027773 281 0 9.24584e+07 0.0344347 542501 9.3063e+07 1.1083e+07 25115 4.60425e+07 0 0.227802 0.993504 0.732711 9.24584e+07 0.00383691 2.02351e+07 9.95868e+06 2.04286e+07 258 2.03988e+07 1.24875e+07 0.00330634 2.03873e+07 49.986 0.0058294 0.994931 0 50.238 GTEX-1HCU8-1526-SM-ADEHG 0 C1 2 pieces, ~70% occlusive focally aclicifying atherosis, rep delineated 7 Blood Vessel Artery - Tibial 0007610 806 622 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982203 353067 0.971045 0.988523 0.78079 23527 1 76 0.00350716 275 0 9.48803e+07 0.0285861 489407 9.59819e+07 1.04716e+07 23565 4.6998e+07 0 0.190255 0.988523 0.771829 9.48803e+07 0.003212 2.05133e+07 8.89786e+06 2.07711e+07 265 2.09987e+07 1.54377e+07 0.00336052 2.08194e+07 49.7857 0.00509895 0.994843 0 50.3121 GTEX-1HCU8-2026-SM-9YFLE 2 C1 6 pieces, mainly stroma; surface layers of mucosa largely sloughed 5.6 Vagina Vagina 0000996 817 613 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.99118 179256 0.972949 0.992797 0.736109 23554 1 76 0.00274512 152 0 7.08695e+07 0.0267576 549385 7.13836e+07 2.73709e+06 23585 3.52711e+07 0 0.23684 0.992797 0.730807 7.08695e+07 0.00404271 1.57025e+07 8.27692e+06 1.58027e+07 161 1.58017e+07 1.0833e+07 0.00339286 1.58199e+07 50.0287 0.00769623 0.994414 0 50.1591 GTEX-1HCU8-2226-SM-9WPOV 1 C1 6 pieces, squamous mucosa up to ~0.35mm, ~15% of thickness 6.9 Esophagus Esophagus - Mucosa 0006920 819 612 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.988868 222858 0.97641 0.990367 0.733473 22477 1 76 0.00532895 164 0 8.96091e+07 0.023341 1.71536e+06 9.04808e+07 1.35118e+07 22510 4.46262e+07 0 0.242937 0.990367 0.726407 8.96091e+07 0.00571837 2.01118e+07 1.30112e+07 2.06672e+07 186 2.06672e+07 1.29169e+07 0.00552337 2.02443e+07 49.4832 0.0189583 0.991865 0 50.6809 GTEX-1HCU8-2326-SM-ACKVL 1 C1 6 pieces, confirmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 820 611 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848,LCSET-8322 01/06/2016 TruSeq.v1 RNASEQ 0.98734 202944 0.972339 0.989757 0.766744 20498 1 76 0.00245929 114 0 4.11706e+07 0.02746 2.18884e+06 4.15967e+07 2.65542e+06 20514 2.04677e+07 0 0.205595 0.989757 0.75889 4.11706e+07 0.00347859 9.11152e+06 4.43868e+06 9.27172e+06 116 9.27409e+06 3.98962e+06 0.0029677 9.20089e+06 49.8019 0.0526206 0.992173 0 50.4357 GTEX-1HCU8-2426-SM-A9SM7 1 C1 6 pieces, confirmed target muscularis, incidental ~1mm submucosal mucus gland delineated 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 821 611 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988886 200043 0.972015 0.990552 0.773177 22611 1 76 0.00648466 127 0 7.21336e+07 0.0277612 2.28054e+06 7.28216e+07 1.27745e+07 22635 3.58989e+07 0 0.198837 0.990552 0.765872 7.21336e+07 0.00826995 1.58169e+07 7.64648e+06 1.5981e+07 152 1.59644e+07 9.07085e+06 0.00737581 1.59479e+07 49.9742 0.0313168 0.992218 0 50.2581 GTEX-1HCU8-2526-SM-CE6RX 0 C1 6 pieces, squamous epithelium is ~70 microns; adherent dermal fat up to ~1mm, rep. delineated. 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 823 610 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987311 376507 0.966194 0.988625 0.676623 25384 1 76 0.00822567 134 0 7.45906e+07 0.0335785 326060 7.54488e+07 1.27865e+07 25430 3.70869e+07 0 0.289571 0.988625 0.668926 7.45906e+07 0.00773616 1.64012e+07 9.04506e+06 1.64216e+07 131 1.65006e+07 9.90626e+06 0.00798124 1.64214e+07 49.8797 0.0043216 0.989939 0 50.0311 GTEX-1HCU9-0002-SM-DHP2A B1 Blood Whole Blood 0013756 -70 BP-57960 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/10/2014 LCSET-10344,LCSET-10654 03/03/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCU9-0004-SM-EYYW6 B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -69 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988768 575944 0.974803 0.991589 0.844545 20924 1 76 0.00257247 223 0 9.35448e+07 0.024219 401982 9.43383e+07 3.17057e+06 20951 4.64957e+07 0 0.130259 0.991589 0.837441 9.35448e+07 0.00379331 2.09344e+07 1.3593e+07 2.10902e+07 225 2.11989e+07 2.33084e+07 0.00318116 2.10783e+07 49.8575 0.00426107 0.994409 0 50.1853 GTEX-1HCU9-0005-SM-A9G1A B1 8.1 Blood Whole Blood 0013756 -71 BP-57961 RNA isolation_PAXgene Blood RNA (Manual) 11/10/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.971372 519948 0.969 0.976642 0.816308 17904 1 76 0.00312208 109 0 7.89745e+07 0.0303508 221944 8.08633e+07 5.85988e+06 17908 3.92021e+07 0 0.152693 0.976642 0.79724 7.89745e+07 0.00483181 1.79404e+07 1.025e+08 1.81501e+07 128 1.83037e+07 1.94791e+07 0.00396113 1.82074e+07 49.8682 0.00274468 0.981912 0 50.2905 GTEX-1HCU9-0126-SM-9WG7M 1 B1 2 fragmented pieces; moderate number of polymorphs in the red pulp 6.5 Spleen Spleen 0002106 60 1434 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990927 191281 0.965424 0.993148 0.788981 24407 1 76 0.00285649 204 0 9.0143e+07 0.0338424 1.07727e+06 9.07649e+07 6.69605e+06 24440 4.4853e+07 0 0.176443 0.993148 0.783575 9.0143e+07 0.003886 1.97366e+07 1.09545e+07 2.00381e+07 255 2.00073e+07 1.286e+07 0.0033701 1.99534e+07 49.9326 0.0118688 0.99537 0 50.379 GTEX-1HCU9-0226-SM-9WPNT 1 B1 2 pieces; moderate lymphoid content consistent with lymphocytic (Hashimoto) thyroiditis 7.6 Thyroid Thyroid 0002046 847 647 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.98729 233050 0.96482 0.988981 0.751378 24745 1 76 0.00668866 128 0 7.42177e+07 0.0338301 169209 7.50446e+07 1.14793e+07 24777 3.69035e+07 0 0.213442 0.988981 0.743099 7.42177e+07 0.00737124 1.62948e+07 1.0931e+07 1.63916e+07 139 1.64388e+07 1.18695e+07 0.00702937 1.63662e+07 49.8893 0.00225478 0.990672 0 50.1481 GTEX-1HCU9-0326-SM-9WYSC 1 B1 2 pieces; fatty tissue with less than 5% fibrous content and no mammary tissue 6.7 Breast Breast - Mammary Tissue 0008367 854 640 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993134 208048 0.974184 0.994773 0.81542 23437 1 76 0.00258422 274 0 9.18371e+07 0.025601 536249 9.23196e+07 6.65562e+06 23473 4.57539e+07 0 0.158764 0.994773 0.811158 9.18371e+07 0.00441826 2.00835e+07 9.59e+06 2.04444e+07 272 2.03895e+07 1.37445e+07 0.00349972 2.0274e+07 49.8579 0.00580862 0.996412 0 50.4453 GTEX-1HCU9-0426-SM-9WYSD 0 B1 6 pieces; well trimmed; 5% dermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 857 637 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993176 178771 0.972527 0.99451 0.765644 24764 1 76 0.00245289 281 0 9.69056e+07 0.0272623 592196 9.74406e+07 6.29118e+06 24805 4.83e+07 0 0.206883 0.99451 0.761441 9.69056e+07 0.00427489 2.14084e+07 1.04556e+07 2.16456e+07 276 2.15778e+07 1.46255e+07 0.00336267 2.15954e+07 50.0204 0.00607751 0.995843 0 50.2754 GTEX-1HCU9-0526-SM-CGQFP 1 B1 6 pieces; no plaques; up to 1 mm adventitial stroma 7.5 Blood Vessel Artery - Aorta 0001496 859 635 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993338 475574 0.97678 0.994875 0.847509 24158 1 76 0.00349526 500 0 1.7032e+08 0.0228969 485039 1.71198e+08 1.16317e+07 24197 8.48811e+07 0 0.129271 0.994875 0.843166 1.7032e+08 0.00366191 3.67315e+07 1.54739e+07 3.69654e+07 433 3.68374e+07 3.20243e+07 0.00357401 3.70647e+07 50.1538 0.00283321 0.996412 0 50.1587 GTEX-1HCU9-0626-SM-ACKW6 0 B1 2 pieces; <5% fibrous content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 861 633 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992102 175787 0.976211 0.993919 0.829125 22538 1 76 0.00296807 273 0 8.82666e+07 0.0235756 1.14410e+06 8.88066e+07 1.17723e+07 22558 4.39701e+07 0 0.147086 0.993919 0.824083 8.82666e+07 0.00393945 1.92958e+07 1.53065e+07 1.95704e+07 270 1.95905e+07 1.18526e+07 0.00345288 1.94169e+07 49.7775 0.0128831 0.995737 0 50.3533 GTEX-1HCU9-0826-SM-A8N8I 1 B1 6 pieces; submucosal glands in 3 pieces 8.6 Esophagus Esophagus - Mucosa 0006920 868 626 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986981 361364 0.974323 0.988889 0.817503 23518 1 76 0.0109821 211 0 1.07633e+08 0.0252681 790264 1.08842e+08 1.9351e+07 23539 5.35299e+07 0 0.15682 0.988889 0.80842 1.07633e+08 0.010592 2.40939e+07 1.95781e+07 2.43642e+07 250 2.43994e+07 2.00808e+07 0.0107875 2.42574e+07 49.8541 0.00726066 0.990798 0 50.2789 GTEX-1HCU9-0926-SM-B2LXS 1 B1 6 pieces; well dissected with small foci of submucosal stroma 6.7 Esophagus Esophagus - Muscularis 0004648 867 627 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992132 570340 0.976821 0.99386 0.843783 22152 1 76 0.00241307 274 0 8.97038e+07 0.0229356 884958 9.0258e+07 3.77339e+06 22167 4.46552e+07 0 0.133038 0.99386 0.838602 8.97038e+07 0.00367363 1.9234e+07 8.28869e+06 1.95315e+07 272 1.95152e+07 1.47309e+07 0.00304226 1.93865e+07 49.8346 0.00980475 0.995588 0 50.3838 GTEX-1HCU9-1326-SM-B2LXT 1 B1 6 pieces; all full thickness 6.5 Colon Colon - Transverse 0001157 878 616 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990366 514558 0.973653 0.992238 0.812466 24315 1 76 0.00269488 277 0 9.17413e+07 0.025449 1.57748e+06 9.24589e+07 3.74492e+06 24347 4.56218e+07 0 0.161187 0.992238 0.80616 9.17413e+07 0.00417562 2.03229e+07 1.16272e+07 2.05453e+07 290 2.05508e+07 1.2564e+07 0.00343385 2.04603e+07 49.8896 0.0170614 0.994111 0 50.2721 GTEX-1HCU9-1526-SM-A9SL7 1 B1 6 fragmented pieces; moderate untrimmed subcutaneous fat; 5% dermal fat 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 887 607 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988196 268620 0.969118 0.989873 0.768516 23356 1 76 0.00680251 167 0 7.95839e+07 0.0306767 840633 8.03981e+07 1.51126e+07 23389 3.96146e+07 0 0.200602 0.989873 0.760733 7.95839e+07 0.00822882 1.73724e+07 1.10606e+07 1.7642e+07 161 1.76078e+07 1.06612e+07 0.00751446 1.75245e+07 49.8815 0.0104559 0.991549 0 50.3849 GTEX-1HCU9-1726-SM-ADEHY 1 B1 2 pieces; 10% external and internal fat 6.2 Nerve Nerve - Tibial 0001323 890 604 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981559 370139 0.969575 0.987948 0.74926 24316 1 76 0.00359535 225 0 9.43564e+07 0.0301349 567595 9.55075e+07 1.08818e+07 24367 4.67393e+07 0 0.220315 0.987948 0.74023 9.43564e+07 0.00333227 2.05912e+07 9.28535e+06 2.09443e+07 233 2.11698e+07 1.46121e+07 0.00346466 2.09098e+07 49.691 0.00594294 0.994337 0 50.425 GTEX-1HCU9-1826-SM-9YFME 1 B1 2 pieces; 20% vein present 6.5 Blood Vessel Artery - Tibial 0007610 893 601 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993997 263786 0.978806 0.995209 0.869067 21471 1 76 0.0023302 278 0 9.24031e+07 0.0207885 768701 9.28479e+07 3.23092e+06 21487 4.60469e+07 0 0.109739 0.995209 0.864903 9.24031e+07 0.00348222 2.00202e+07 7.17438e+06 2.01953e+07 264 2.01483e+07 1.84209e+07 0.0029055 2.01791e+07 50.0381 0.00827914 0.996421 0 50.2178 GTEX-1HCU9-1926-SM-9WYSE 0 B1 2 fragmented pieces; 5% internal fat and vascular tissue 7.5 Muscle Muscle - Skeletal 0011907 895 599 BP-60908 RNA Extraction from Paxgene-derived Lysate Plate Based 02/25/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994831 300782 0.983233 0.995971 0.882575 18984 1 76 0.00239653 272 0 1.04146e+08 0.0165799 1.59746e+06 1.04568e+08 7.08609e+06 18991 5.19305e+07 0 0.100658 0.995971 0.879019 1.04146e+08 0.00398908 2.27075e+07 1.53649e+07 2.29676e+07 287 2.30028e+07 1.95951e+07 0.0031919 2.27668e+07 49.7423 0.0152768 0.997111 0 50.2848 GTEX-1HCUA-0002-SM-AG5YA B1 Blood Whole Blood 0013756 -155 BP-57960 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/10/2014 LCSET-8280 12/23/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCUA-0004-SM-EYYW7 B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -155 BP-59800 RNA isolation_Trizol Manual (Cell Pellet) 01/21/2015 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985855 990390 0.970003 0.990061 0.825066 21483 1 76 0.00229283 183 0 9.348e+07 0.0289918 316816 9.44184e+07 3.33231e+06 21513 4.63834e+07 0 0.144937 0.990061 0.816866 9.348e+07 0.00396091 2.06832e+07 1.32903e+07 2.08662e+07 195 2.10481e+07 2.24385e+07 0.00312333 2.08795e+07 49.7989 0.00335545 0.994268 0 50.2202 GTEX-1HCUA-0006-SM-ACKV9 B1 7.8 Blood Whole Blood 0013756 -155 BP-57961 RNA isolation_PAXgene Blood RNA (Manual) 11/10/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.981196 667467 0.965166 0.982887 0.806533 18152 1 76 0.00268552 153 0 9.56418e+07 0.0342179 215757 9.7307e+07 1.2369e+07 18164 4.76272e+07 0 0.158633 0.982887 0.792731 9.56418e+07 0.0040504 2.1599e+07 1.03913e+08 2.16762e+07 198 2.16752e+07 2.20562e+07 0.00336678 2.1774e+07 50.1137 0.00221728 0.984578 0 50.0892 GTEX-1HCUA-0126-SM-B2LWC 0 B1 2 pieces; mild fibrosis 6.6 Thyroid Thyroid 0002046 169 571 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991458 601417 0.966662 0.993051 0.733753 24728 1 76 0.00265271 166 0 9.0574e+07 0.0330668 262298 9.12078e+07 4.0366e+06 24776 4.50903e+07 0 0.232909 0.993051 0.728654 9.0574e+07 0.00371331 1.97983e+07 8.00859e+06 1.99236e+07 201 1.99965e+07 1.39003e+07 0.00318216 1.98542e+07 49.8214 0.00287583 0.994645 0 50.1576 GTEX-1HCUA-0226-SM-A8N88 0 B1 2 pieces; some collapse, pigmented macrophages 8.7 Lung Lung 0008952 177 563 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.991372 322386 0.973175 0.992875 0.805176 25414 1 76 0.00604318 282 0 1.13086e+08 0.026378 321260 1.13897e+08 1.61059e+07 25452 5.6315e+07 0 0.167999 0.992875 0.799439 1.13086e+08 0.00619764 2.51323e+07 1.04358e+07 2.52885e+07 285 2.53415e+07 2.14774e+07 0.00612029 2.52451e+07 49.9047 0.00282062 0.994379 0 50.1549 GTEX-1HCUA-0326-SM-CGQEH 1 B1 6 pieces; intimal thickening 6.7 Blood Vessel Artery - Aorta 0001496 179 561 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992406 476661 0.974381 0.994054 0.823312 25369 1 76 0.00367633 524 0 1.7837e+08 0.0251253 709509 1.79437e+08 1.20761e+07 25421 8.88414e+07 0 0.151068 0.994054 0.818417 1.7837e+08 0.00393369 3.87919e+07 1.53409e+07 3.90553e+07 440 3.89293e+07 2.92817e+07 0.00379791 3.91482e+07 50.1402 0.00395409 0.995702 0 50.1692 GTEX-1HCUA-0426-SM-CGQEI 1 B1 2 pieces; mild plaque 7.1 Blood Vessel Artery - Coronary 0001621 194 546 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992033 578723 0.9744 0.993851 0.843504 24703 1 76 0.00353246 524 0 1.71461e+08 0.0253383 658528 1.72522e+08 1.16241e+07 24743 8.53941e+07 0 0.130896 0.993851 0.838317 1.71461e+08 0.00409046 3.68153e+07 1.45149e+07 3.71122e+07 437 3.69136e+07 3.0022e+07 0.00379607 3.72603e+07 50.2337 0.00381707 0.99567 0 50.2008 GTEX-1HCUA-0526-SM-A9SMH 0 B1 2 pieces; interstitial and patchy fibrosis c/w prior ischemia, hypertrophy 8.5 Heart Heart - Left Ventricle 0006566 201 539 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990903 313789 0.981962 0.992253 0.856297 22178 1 76 0.00655645 272 0 1.09409e+08 0.0177164 1.54193e+06 1.10263e+08 1.99288e+07 22194 5.45134e+07 0 0.125664 0.992253 0.849664 1.09409e+08 0.0077834 2.38277e+07 1.97836e+07 2.41701e+07 267 2.40961e+07 1.94258e+07 0.00716909 2.40048e+07 49.9051 0.0139841 0.993603 0 50.3566 GTEX-1HCUA-0626-SM-ACKVT 1 B1 2 pieces; 1 piece is ~60-70% fat 8.4 Heart Heart - Atrial Appendage 0006631 205 535 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992933 375080 0.977559 0.994319 0.823806 23583 1 76 0.00287321 273 0 1.34159e+08 0.0221248 2.28555e+06 1.34925e+08 1.71531e+07 23609 6.68553e+07 0 0.153753 0.994319 0.819126 1.34159e+08 0.00361144 2.8269e+07 2.82297e+07 2.8531e+07 315 2.83455e+07 2.14974e+07 0.00324181 2.86104e+07 50.2326 0.0169393 0.995704 0 50.2306 GTEX-1HCUA-0726-SM-ACKVU 1 B1 2 pieces; 1 piece is predominantly fat (80%) with small portion of fibrous tissue/ductal elements; 2nd piece is nearly entirely dense fibrocollagenous stroma with numerous embedded ducts/lobules 6.7 Breast Breast - Mammary Tissue 0008367 208 532 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991717 286354 0.972704 0.993348 0.802936 25148 1 76 0.00308161 284 0 1.09949e+08 0.0265554 405565 1.10685e+08 1.5644e+07 25185 5.47307e+07 0 0.169768 0.993348 0.797595 1.09949e+08 0.00385263 2.41175e+07 1.22664e+07 2.43751e+07 291 2.4369e+07 1.93057e+07 0.00346649 2.4294e+07 49.9229 0.00366413 0.99498 0 50.2656 GTEX-1HCUA-0826-SM-ADEHM 0 B1 6 pieces; well trimmed 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 215 525 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980913 363906 0.972343 0.98761 0.803461 22627 1 76 0.00362624 193 0 7.61065e+07 0.027493 697396 7.70613e+07 8.4917e+06 22652 3.76904e+07 0 0.168882 0.98761 0.793507 7.61065e+07 0.00402846 1.6448e+07 1.02496e+07 1.69107e+07 185 1.7053e+07 1.12316e+07 0.00382599 1.67565e+07 49.5616 0.00904989 0.994308 0 50.6936 GTEX-1HCUA-0926-SM-ADEIX 0 B1 2 pieces; mature fat 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 210 530 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.98323 347267 0.972363 0.989525 0.822871 24474 1 76 0.00345021 281 0 1.08289e+08 0.0272639 598717 1.09435e+08 1.17718e+07 24510 5.36838e+07 0 0.149492 0.989525 0.814252 1.08289e+08 0.00324159 2.34313e+07 1.14977e+07 2.38471e+07 303 2.40663e+07 1.83837e+07 0.00334656 2.38158e+07 49.7385 0.00547098 0.995819 0 50.4397 GTEX-1HCUA-1026-SM-A9SMI 1 B1 6 pieces; few lymphoid aggregates 7.6 Vagina Vagina 0000996 226 514 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988996 217654 0.971808 0.990481 0.75897 23302 1 76 0.00683529 110 0 5.77751e+07 0.0278459 112637 5.83303e+07 1.07402e+07 23327 2.87623e+07 0 0.212838 0.990481 0.751745 5.77751e+07 0.00793134 1.28065e+07 6.85258e+06 1.2905e+07 106 1.29261e+07 9.9832e+06 0.0073825 1.28689e+07 49.8891 0.00193102 0.991966 0 50.1916 GTEX-1HCUA-1126-SM-B2LWD 1 B1 6 pieces; target muscularis 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 229 511 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99259 734389 0.976342 0.994132 0.829422 23160 1 76 0.00246832 282 0 9.85207e+07 0.0233498 487436 9.91023e+07 4.05167e+06 23191 4.90468e+07 0 0.14692 0.994132 0.824555 9.85207e+07 0.00350304 2.15366e+07 8.16087e+06 2.17571e+07 279 2.17646e+07 1.75497e+07 0.00298488 2.16672e+07 49.8878 0.00491851 0.995673 0 50.2547 GTEX-1HCUA-1226-SM-9WPP5 1 B1 2 pieces; mostly myometrium, small portion of endometrium in both 7.9 Uterus Uterus 0000995 232 508 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987796 223668 0.969743 0.989442 0.787908 23491 1 76 0.00639259 155 0 8.09573e+07 0.0299181 154178 8.18212e+07 1.27447e+07 23523 4.03089e+07 0 0.181835 0.989442 0.779589 8.09573e+07 0.00677375 1.7699e+07 7.52886e+06 1.78104e+07 159 1.78335e+07 1.41791e+07 0.00658286 1.78023e+07 49.9562 0.00188433 0.991088 0 50.1569 GTEX-1HCUA-1326-SM-9WPP6 1 B1 2 pieces; few surface epithelial inclusion glands and adjacent psammoma bodies; significant portion of both is hilum/vessels 7.6 Ovary Ovary 0000992 233 507 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987816 222635 0.966254 0.989439 0.751671 23709 1 76 0.00649098 138 0 7.40383e+07 0.0334354 152614 7.48286e+07 1.20079e+07 23746 3.68613e+07 0 0.214583 0.989439 0.743733 7.40383e+07 0.00669083 1.6215e+07 9.06895e+06 1.63293e+07 140 1.63462e+07 1.27082e+07 0.00659074 1.63146e+07 49.9517 0.00203951 0.991061 0 50.1757 GTEX-1HCUA-1426-SM-9WPP7 0 B1 6 pieces; includes few lymphoid aggregates and clusters of submucosal glands 9.8 Esophagus Esophagus - Mucosa 0006920 236 504 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985366 280398 0.976745 0.987009 0.826566 22956 1 76 0.0065312 151 0 7.89106e+07 0.0226969 259920 7.99493e+07 1.24577e+07 22976 3.92829e+07 0 0.150178 0.987009 0.815828 7.89106e+07 0.00719463 1.77357e+07 1.28741e+07 1.78459e+07 149 1.78914e+07 1.6165e+07 0.00686236 1.78151e+07 49.8932 0.00325106 0.988652 0 50.1549 GTEX-1HCUA-1526-SM-A9G3M 0 B1 6 pieces; target muscularis 8 Esophagus Esophagus - Muscularis 0004648 238 502 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986952 198840 0.977989 0.991717 0.841666 22109 1 76 0.00384329 219 0 8.8251e+07 0.0216682 674475 8.8988e+07 8.21768e+06 22131 4.3826e+07 0 0.136323 0.991717 0.834695 8.8251e+07 0.00416341 1.89077e+07 8.0955e+06 1.92628e+07 238 1.93303e+07 1.5307e+07 0.00400049 1.92052e+07 49.8377 0.00757939 0.996483 0 50.4652 GTEX-1HCUA-1626-SM-A9SMG 1 B1 6 pieces; full thickness sections, rare aggregate of lymphocytes 7 Stomach Stomach 0000945 241 499 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.990976 303297 0.974208 0.992464 0.818159 22509 1 76 0.00509905 140 0 6.9205e+07 0.0255759 470428 6.97305e+07 9.41689e+06 22529 3.44713e+07 0 0.156049 0.992464 0.811993 6.9205e+07 0.00646147 1.5111e+07 7.29727e+06 1.53179e+07 150 1.52791e+07 1.10266e+07 0.00577924 1.52437e+07 49.9419 0.00674637 0.993952 0 50.34 GTEX-1HCUA-1726-SM-A8N86 1 B1 6 pieces; good lymphoid component, small portion of residual muscularis in 3 of 6 pieces 8.4 Small Intestine Small Intestine - Terminal Ileum 0001211 254 486 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.987141 372065 0.967072 0.988743 0.769652 26351 1 76 0.0109845 221 0 1.06132e+08 0.0321895 398320 1.0734e+08 1.74146e+07 26400 5.27658e+07 0 0.19742 0.988743 0.760988 1.06132e+08 0.0102504 2.33942e+07 1.3543e+07 2.36107e+07 211 2.36704e+07 1.8719e+07 0.010618 2.35026e+07 49.8222 0.00371081 0.990346 0 50.2303 GTEX-1HCUA-1826-SM-A8N87 1 B1 6 pieces; full thickness sections 7.8 Colon Colon - Transverse 0001157 249 491 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.982319 359625 0.971033 0.984757 0.802588 25243 1 76 0.0117818 286 0 1.10325e+08 0.025765 1.0488e+06 1.12032e+08 2.0123e+07 25285 5.46468e+07 0 0.168445 0.984757 0.790354 1.10325e+08 0.0117063 2.44242e+07 1.9406e+07 2.46627e+07 266 2.47618e+07 1.71875e+07 0.0117442 2.4569e+07 49.8046 0.00936159 0.987196 0 50.2429 GTEX-1HCUA-1926-SM-B2LWE 1 B1 6 pieces; target muscularis, several pieces include strips of residual mucosa 7.1 Colon Colon - Sigmoid 0001159 253 487 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991862 697435 0.973416 0.993474 0.806366 23775 1 76 0.0024757 287 0 1.03909e+08 0.026272 370765 1.04591e+08 4.29020e+06 23816 5.17277e+07 0 0.167051 0.993474 0.801103 1.03909e+08 0.00360977 2.24427e+07 8.34541e+06 2.26280e+07 290 2.26595e+07 1.80747e+07 0.00304182 2.2564e+07 49.8945 0.0035449 0.995087 0 50.2056 GTEX-1HCUA-2026-SM-CGQEJ 1 B1 2 pieces; mild atherosclerosis 6.9 Blood Vessel Artery - Tibial 0007610 285 455 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992086 750917 0.973329 0.993856 0.813091 24711 1 76 0.00374073 514 0 1.76207e+08 0.026317 547742 1.77297e+08 1.22198e+07 24773 8.77454e+07 0 0.160239 0.993856 0.808095 1.76207e+08 0.00390236 3.80726e+07 1.30205e+07 3.82517e+07 428 3.81935e+07 2.80289e+07 0.00381708 3.83737e+07 50.1177 0.00308941 0.995626 0 50.1173 GTEX-1HCUA-2226-SM-ADEHF 1 B1 2 pieces; 1 piece includes central defects (?poor fixation); 2nd is ~30% fibrous 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 290 450 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982647 353602 0.973983 0.988946 0.802756 22625 1 76 0.00349591 168 0 7.97054e+07 0.0257459 522038 8.05964e+07 8.29733e+06 22652 3.94939e+07 0 0.171227 0.988946 0.793882 7.97054e+07 0.003334 1.72567e+07 8.29761e+06 1.75789e+07 194 1.77781e+07 1.29116e+07 0.00341547 1.75022e+07 49.6089 0.00647719 0.995245 0 50.4624 GTEX-1HCUA-2326-SM-ACKVJ 1 B1 2 pieces; minimal internal fat 7.8 Muscle Muscle - Skeletal 0011907 288 452 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993981 304527 0.984666 0.995205 0.87968 20126 1 76 0.00270703 278 0 1.21686e+08 0.0150638 1.10436e+06 1.22272e+08 1.56944e+07 20136 6.0658e+07 0 0.104986 0.995205 0.875462 1.21686e+08 0.00360055 2.63176e+07 2.05981e+07 2.65889e+07 310 2.64721e+07 2.55696e+07 0.00315324 2.65612e+07 50.084 0.00903201 0.996428 0 50.2563 GTEX-1HCUA-2426-SM-ADEIS 1 B1 6 pieces; ~10% internal fat, but multiple tissue defects 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 296 444 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980923 1.13073e+06 0.976448 0.987761 0.807557 27427 1 76 0.0034024 436 0 2.39369e+08 0.0232079 768595 2.42335e+08 2.38001e+07 27500 1.18542e+08 0 0.168891 0.987761 0.797674 2.39369e+08 0.00393159 5.18936e+07 2.94816e+07 5.25636e+07 414 5.32555e+07 4.34745e+07 0.00366516 5.26613e+07 49.7195 0.00317162 0.9946 0 50.3207 GTEX-1HCUA-5004-SM-AN471 B1 Heart Heart - Left Ventricle 0006566 202 ChIP-Seq GTEX-1HCUA-5016-SM-AN472 B1 Muscle Muscle - Skeletal 0011907 292 ChIP-Seq GTEX-1HCVE-0003-SM-EZ6LX C1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 586 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989897 1.77318e+06 0.921079 0.991642 0.756935 22739 1 76 0.00264195 212 0 1.06746e+08 0.078158 480767 1.07646e+08 8.25872e+06 22774 5.31436e+07 0 0.164144 0.991642 0.750608 1.06746e+08 0.00374186 2.2373e+07 6.74269e+07 2.28417e+07 227 2.29116e+07 2.29594e+07 0.00319094 2.24921e+07 49.538 0.00446618 0.993387 0 50.5183 GTEX-1HCVE-0006-SM-ADEH2 C1 8.8 Blood Whole Blood 0013756 586 BP-58083 RNA isolation_PAXgene Blood RNA (Manual) 11/14/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.97221 1.3119e+06 0.945623 0.97878 0.732309 17847 1 76 0.00345695 98 0 7.77687e+07 0.0536526 211239 7.94547e+07 8.40029e+06 17861 3.84949e+07 0 0.213314 0.97878 0.71677 7.77687e+07 0.00401402 1.71873e+07 1.04252e+08 1.74409e+07 122 1.76574e+07 1.71252e+07 0.00373362 1.74661e+07 49.7277 0.00265861 0.98535 0 50.3663 GTEX-1HCVE-0011-R10a-SM-ARZLT C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 600 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987746 1.23146e+06 0.955339 0.989817 0.81344 23247 1 76 0.00276874 149 0 6.62832e+07 0.0442962 2.3413e+06 6.69652e+07 2.97700e+06 23262 3.28475e+07 0 0.141899 0.989817 0.805156 6.62832e+07 0.00372087 1.42616e+07 1.63827e+07 1.43426e+07 172 1.47319e+07 8.05793e+06 0.00324381 1.39824e+07 48.6949 0.034963 0.991887 0 50.1417 GTEX-1HCVE-0011-R5b-SM-CKZP7 C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 600 BP-71267 RNA isolation_PAXgene Tissue miRNA 01/28/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99091 620785 0.954058 0.993644 0.825343 23179 1 76 0.00224643 192 0 7.09014e+07 0.0456947 3.3455e+06 7.1355e+07 6.81893e+06 23196 3.52747e+07 0 0.128715 0.993644 0.820097 7.09014e+07 0.00397724 1.53057e+07 1.46354e+07 1.56349e+07 207 1.56222e+07 7.64424e+06 0.00310945 1.54923e+07 49.7913 0.0468854 0.996378 0 50.5319 GTEX-1HCVE-0011-R7b-SM-A9G1I C1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 600 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.989391 396920 0.961863 0.993043 0.841253 23417 1 76 0.00403929 267 0 9.16429e+07 0.0379583 5.57733e+06 9.22849e+07 7.96598e+06 23429 4.55738e+07 0 0.120609 0.993043 0.835401 9.16429e+07 0.00411705 1.98965e+07 2.35333e+07 2.01611e+07 292 2.01064e+07 8.11767e+06 0.00407752 2.02174e+07 50.1376 0.060436 0.996695 0 50.3303 GTEX-1HCVE-0011-R8a-SM-ARU7A C1, A1 5.6 Brain Brain - Hypothalamus 0001898 600 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990756 357546 0.960543 0.992088 0.826665 23810 1 76 0.00264743 266 0 7.9919e+07 0.0393033 5.81278e+06 8.05563e+07 2.78754e+06 23830 3.98168e+07 0 0.133879 0.992088 0.820124 7.9919e+07 0.0032655 1.72117e+07 1.76446e+07 1.77764e+07 299 1.7633e+07 5.56552e+06 0.00295605 1.74219e+07 49.699 0.0721579 0.993421 0 50.8069 GTEX-1HCVE-0126-SM-CGQEU 0 C1 6 pieces; minimal dermal fat; squamous epithelium is ~50 microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 753 1403 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.989338 467036 0.967574 0.990826 0.744033 26928 1 76 0.00394656 388 0 1.5654e+08 0.0322442 742866 1.57989e+08 1.00908e+07 26989 7.79903e+07 0 0.223541 0.990826 0.737207 1.5654e+08 0.00373371 3.42545e+07 1.73177e+07 3.4457e+07 408 3.44256e+07 2.16546e+07 0.00384595 3.44779e+07 50.0379 0.004702 0.992314 0 50.1474 GTEX-1HCVE-0226-SM-CGQEV 0 C1 2 pieces; fascia/vascular elements (rep delineated) are ~5-10% tissue 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 754 1402 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993576 613470 0.969622 0.99509 0.792666 26086 1 76 0.00377972 386 0 1.80008e+08 0.0300797 1.08313e+06 1.80896e+08 1.25297e+07 26153 8.97061e+07 0 0.176956 0.99509 0.788773 1.80008e+08 0.00368288 3.93303e+07 2.63426e+07 3.96155e+07 394 3.95772e+07 2.88572e+07 0.00373396 3.95782e+07 50.0007 0.00598757 0.996604 0 50.1806 GTEX-1HCVE-0326-SM-CGQEW 0 C1 2 pieces, interstitial fat/vascular elements are 10-20% of tissue, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 763 1394 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993942 631328 0.979593 0.995497 0.86343 23910 1 76 0.00353951 385 0 2.08754e+08 0.0201703 2.34011e+06 2.09698e+08 1.40079e+07 23940 1.04084e+08 0 0.116163 0.995497 0.859542 2.08754e+08 0.00343812 4.49977e+07 2.29881e+07 4.55023e+07 385 4.558e+07 4.04198e+07 0.00349165 4.51213e+07 49.7471 0.0111594 0.997052 0 50.2788 GTEX-1HCVE-0426-SM-CM2SE 0 C1 2 pieces; interstitial fat is ~10% of tissue, delineated 7.8 Nerve Nerve - Tibial 0001323 767 1390 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993058 230710 0.970081 0.994251 0.770159 23610 1 76 0.00209708 190 0 7.93484e+07 0.0296246 255584 7.98072e+07 5.03629e+06 23648 3.95148e+07 0 0.199921 0.994251 0.765732 7.93484e+07 0.00286637 1.74913e+07 6.30778e+06 1.75445e+07 189 1.75605e+07 1.29418e+07 0.00248126 1.75693e+07 50.0125 0.00320252 0.995444 0 50.0759 GTEX-1HCVE-0526-SM-ACKW1 0 C1 2 pieces; no adherent fat or significant atherosis 8.7 Blood Vessel Artery - Tibial 0007610 769 1389 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.99329 284298 0.974916 0.994613 0.831957 22864 1 76 0.00275257 282 0 1.13025e+08 0.024618 351197 1.13637e+08 1.53671e+07 22893 5.63007e+07 0 0.142959 0.994613 0.827475 1.13025e+08 0.00332697 2.42328e+07 9.22531e+06 2.44115e+07 289 2.44171e+07 2.30283e+07 0.00303939 2.43679e+07 49.9496 0.00309052 0.995937 0 50.1836 GTEX-1HCVE-0626-SM-A9SL2 1 C1 2 pieces, moderate congestion 6.9 Lung Lung 0008952 820 1338 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988891 225021 0.970163 0.99038 0.755943 25216 1 76 0.00683223 168 0 9.49858e+07 0.0294312 298491 9.59085e+07 1.69437e+07 25267 4.72742e+07 0 0.214221 0.99038 0.74867 9.49858e+07 0.00815434 2.07731e+07 9.23357e+06 2.09246e+07 183 2.09525e+07 1.47613e+07 0.00749229 2.08773e+07 49.9102 0.00311225 0.991869 0 50.1816 GTEX-1HCVE-0726-SM-A96SH 1 C1 2 pieces, mild goitrous changes 7.2 Thyroid Thyroid 0002046 822 1336 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991888 235820 0.966993 0.993299 0.754732 24212 1 76 0.00220908 165 0 8.27e+07 0.0326881 137476 8.32579e+07 3.02946e+06 24252 4.12007e+07 0 0.212261 0.993299 0.749675 8.27e+07 0.00245267 1.80697e+07 7.87972e+06 1.82029e+07 197 1.82314e+07 1.39916e+07 0.00233071 1.81511e+07 49.8896 0.00165121 0.994709 0 50.1837 GTEX-1HCVE-0726-SM-DK2JZ 1 C1 2 pieces, mild goitrous changes Thyroid Thyroid 0002046 822 1336 BP-64430 DNA Extraction from Paxgene-derived Lysate Plate Based 06/12/2015 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HCVE-0826-SM-CM2SF 1 C1 2 pieces, no abnormalities 7.6 Heart Heart - Atrial Appendage 0006631 823 1336 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992807 332153 0.977498 0.994094 0.784244 22804 1 76 0.00238314 156 0 8.22004e+07 0.0220712 2.00807e+06 8.26887e+07 5.48876e+06 22830 4.09176e+07 0 0.193254 0.994094 0.779613 8.22004e+07 0.00310747 1.75812e+07 7.8136e+06 1.77131e+07 197 1.7759e+07 1.22252e+07 0.00274484 1.7624e+07 49.8093 0.0242848 0.995382 0 50.187 GTEX-1HCVE-0926-SM-CGQEX 1 C1 2 pieces, no atherosis 6.8 Blood Vessel Artery - Coronary 0001621 826 1333 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991557 579379 0.969163 0.993402 0.778632 26164 1 76 0.00386659 380 0 1.82757e+08 0.0304635 426140 1.83971e+08 1.34389e+07 26248 9.09655e+07 0 0.190531 0.993402 0.773494 1.82757e+08 0.00398551 3.92077e+07 1.47617e+07 3.9346e+07 409 3.93338e+07 2.94017e+07 0.00392277 3.94924e+07 50.1006 0.00231634 0.995247 0 50.088 GTEX-1HCVE-1026-SM-ACKXR 1 C1 6 pieces atherosis up to ~1.2mm, focally calcified (rep delineated) 7.5 Blood Vessel Artery - Aorta 0001496 827 1333 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992345 255112 0.973747 0.993447 0.774746 23025 1 76 0.0029098 278 0 1.03861e+08 0.0257974 224598 1.04547e+08 1.29496e+07 23063 5.17094e+07 0 0.199001 0.993447 0.769669 1.03861e+08 0.00347726 2.23563e+07 9.68434e+06 2.25195e+07 268 2.2521e+07 1.84931e+07 0.00319321 2.24659e+07 49.9388 0.00214831 0.994549 0 50.1818 GTEX-1HCVE-1126-SM-9WPPG 1 C1 2 pieces, moderate interstitial fibrosis/chronic ischemic change 5.8 Heart Heart - Left Ventricle 0006566 828 1332 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.987927 107576 0.98835 0.989605 0.849881 18584 1 76 0.00734074 262 0 8.0834e+07 0.0116016 5.25437e+06 8.16832e+07 1.2395e+07 18591 4.02767e+07 0 0.138469 0.989605 0.841046 8.0834e+07 0.00786741 1.73101e+07 3.7385e+07 1.79151e+07 261 1.77265e+07 3.2363e+06 0.00760363 1.75578e+07 49.761 0.0643263 0.991283 0 50.8589 GTEX-1HCVE-1226-SM-9WPPH 1 C1 6 pieces; squamous mucosa is ~0.5mm, ~50-60% thickness. A few submucosal mucus glands present, rep. delineated 7.8 Esophagus Esophagus - Mucosa 0006920 831 1330 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986957 274034 0.969433 0.988785 0.779777 23119 1 76 0.0065626 133 0 7.55549e+07 0.0303292 441696 7.64119e+07 1.19714e+07 23142 3.76174e+07 0 0.189657 0.988785 0.771031 7.55549e+07 0.00737357 1.67465e+07 1.08677e+07 1.69199e+07 150 1.69442e+07 1.14859e+07 0.00696733 1.68561e+07 49.8697 0.00578046 0.990612 0 50.2575 GTEX-1HCVE-1326-SM-A9G3Q 1 C1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 832 1329 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985511 51300 0.96858 0.990576 0.792016 19134 1 76 0.00423304 98 0 2.1701e+07 0.0312624 293815 2.19075e+07 2.05704e+06 19140 1.07674e+07 0 0.176564 0.990576 0.784553 2.1701e+07 0.00418857 4.64005e+06 1.8829e+06 4.72877e+06 111 4.74905e+06 2.8244e+06 0.00421122 4.71832e+06 49.8377 0.0134116 0.995641 0 50.4735 GTEX-1HCVE-1526-SM-B2LWW 1 C1 2 pieces, marked passive congestion; moderate macrovesicular steatosis ( 40-50% of parenchyma) 6 Liver Liver 0001114 835 1327 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.988763 740069 0.974988 0.990841 0.826355 20651 1 76 0.00280316 140 0 6.88372e+07 0.0244901 1.19234e+06 6.94736e+07 2.93369e+06 20667 3.42052e+07 0 0.148633 0.990841 0.818786 6.88372e+07 0.00388033 1.48985e+07 7.52706e+06 1.51199e+07 166 1.51551e+07 1.08313e+07 0.00334061 1.49897e+07 49.7257 0.0171625 0.992918 0 50.3687 GTEX-1HCVE-2326-SM-9WYUD 1 C1 6 pieces, confirmed muscularis 6.6 Colon Colon - Sigmoid 0001159 858 1307 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993107 172457 0.96618 0.994405 0.783534 23728 1 76 0.00249717 163 0 7.80638e+07 0.0336125 695006 7.8503e+07 4.898e+06 23755 3.88791e+07 0 0.182646 0.994405 0.77915 7.80638e+07 0.00468703 1.67468e+07 6.78296e+06 1.69109e+07 192 1.68611e+07 1.10387e+07 0.00359067 1.68953e+07 50.0507 0.00885324 0.995704 0 50.2437 GTEX-1HCVE-2526-SM-A9G2G 3 C1 6 pieces, mucosa up to ~-.3mm, advanced autolysis, glandular elements sloughed 5.6 Colon Colon - Transverse 0001157 861 1306 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984068 177584 0.967492 0.989495 0.803341 23219 1 76 0.00418793 121 0 5.90982e+07 0.0322257 369168 5.97256e+07 6.05437e+06 23238 2.9306e+07 0 0.164151 0.989495 0.794902 5.90982e+07 0.00424102 1.25241e+07 6.21489e+06 1.27963e+07 130 1.28594e+07 9.22273e+06 0.00421398 1.27519e+07 49.79 0.00618107 0.994923 0 50.5375 GTEX-1HCVE-2626-SM-ADEJ8 0 C1 2 pieces, adipose elements only 7.3 Breast Breast - Mammary Tissue 0008367 862 1305 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981988 292727 0.972676 0.988576 0.789433 24080 1 76 0.00340815 161 0 7.76662e+07 0.0270158 373158 7.85637e+07 8.0966e+06 24119 3.84694e+07 0 0.183243 0.988576 0.780414 7.76662e+07 0.00367566 1.69234e+07 7.95966e+06 1.71361e+07 169 1.73273e+07 1.39481e+07 0.00354101 1.71941e+07 49.8071 0.00474975 0.995164 0 50.3123 GTEX-1HCVE-2726-SM-CL54F 0 C1 6 pieces, no dermal fat; squamous epithelium is ~30-40 microns 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 864 1304 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990905 408516 0.971431 0.992866 0.760249 23578 1 76 0.00269382 182 0 7.75267e+07 0.0283281 358410 7.80837e+07 1.0408e+07 23615 3.85778e+07 0 0.211182 0.992866 0.754825 7.75267e+07 0.00429777 1.68695e+07 8.57388e+06 1.69853e+07 170 1.70334e+07 1.24451e+07 0.00349421 1.69691e+07 49.9055 0.00459007 0.994826 0 50.1711 GTEX-1HCVE-2826-SM-9WPPI 1 C1 2 pieces, spermatogenesis appears reduced 6.9 Testis Testis 0000473 865 1303 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986157 319290 0.925402 0.987922 0.708331 33010 1 76 0.00651426 146 0 8.11504e+07 0.0742919 1.01284e+06 8.21425e+07 1.27921e+07 33077 4.03974e+07 0 0.217071 0.987922 0.699776 8.11504e+07 0.00689988 1.6822e+07 1.37295e+07 1.6859e+07 140 1.69219e+07 1.2302e+07 0.00670673 1.68825e+07 49.9417 0.0123303 0.989687 0 50.055 GTEX-1HCVE-2926-SM-9WPPJ 1 C1 2 pieces, no abnormalities 7.5 Brain Brain - Cerebellum 0002037 868 1301 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986385 473096 0.938989 0.988306 0.695616 24778 1 76 0.00673476 125 0 8.37153e+07 0.0606834 1.23471e+06 8.47058e+07 1.33177e+07 24817 4.16504e+07 0 0.243373 0.988306 0.687482 8.37153e+07 0.00717577 1.79161e+07 2.13455e+07 1.80508e+07 161 1.81005e+07 9.23332e+06 0.00695484 1.80113e+07 49.8764 0.0145764 0.990228 0 50.1872 GTEX-1HCVE-3026-SM-CL54G 1 C1 2 pieces, no abnormalities 7.7 Brain Brain - Cortex 0001870 870 1299 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991729 792012 0.965614 0.993723 0.818882 25571 1 76 0.00276273 372 0 1.18149e+08 0.0339743 3.33969e+06 1.18895e+08 1.48681e+07 25608 5.87927e+07 0 0.146733 0.993723 0.813742 1.18149e+08 0.0043248 2.58132e+07 1.39092e+07 2.62945e+07 387 2.6316e+07 1.47695e+07 0.0035422 2.59953e+07 49.6935 0.0280893 0.995718 0 50.4619 GTEX-1HCVE-3126-SM-A8N8E 1 C1 1 piece, mainly adenohypophysis and dura; ~3x2mm nubbin of neurohypophysis, delineated 7.4 Pituitary Pituitary 0000007 871 1299 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985926 624489 0.949875 0.988147 0.739569 27305 1 76 0.0113225 203 0 1.11249e+08 0.0498656 497505 1.12583e+08 2.15058e+07 27360 5.52827e+07 0 0.210307 0.988147 0.730802 1.11249e+08 0.0107156 2.24228e+07 2.57435e+07 2.27747e+07 241 2.2875e+07 1.68347e+07 0.0110197 2.2563e+07 49.6567 0.004419 0.990368 0 50.3894 GTEX-1HFI6-0001-SM-AG5Y7 B1 Blood Whole Blood 0013756 880 BP-58091 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HFI6-0003-SM-EZ6M2 B1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 880 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991849 594153 0.974365 0.993261 0.821238 22111 1 76 0.00301681 294 0 1.32506e+08 0.0245842 713980 1.33405e+08 1.01583e+07 22148 6.59735e+07 0 0.153127 0.993261 0.815704 1.32506e+08 0.00378548 2.9648e+07 1.94857e+07 2.97861e+07 318 2.98459e+07 3.22189e+07 0.0034006 2.97665e+07 49.9334 0.00535197 0.994674 0 50.1161 GTEX-1HFI6-0005-SM-A9SK6 B1 9.1 Blood Whole Blood 0013756 880 BP-58083 RNA isolation_PAXgene Blood RNA (Manual) 11/14/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.984184 1.9735e+06 0.929999 0.985794 0.688689 21887 1 76 0.00740665 118 0 9.8607e+07 0.0690242 184512 1.00028e+08 1.86296e+07 21915 4.90293e+07 0 0.24131 0.985794 0.678905 9.8607e+07 0.00879365 2.12984e+07 1.05037e+08 2.14817e+07 137 2.15576e+07 1.76393e+07 0.00809902 2.14266e+07 49.8477 0.0018446 0.987404 0 50.2142 GTEX-1HFI6-0011-R10b-SM-ARZLO B1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 875 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987805 1.17735e+06 0.95653 0.989871 0.841704 22650 1 76 0.00258585 150 0 6.50759e+07 0.0429706 2.06486e+06 6.57418e+07 2.58366e+06 22663 3.22888e+07 0 0.114826 0.989871 0.833178 6.50759e+07 0.00360615 1.40563e+07 1.36904e+07 1.42941e+07 167 1.45125e+07 9.45295e+06 0.00309493 1.39552e+07 49.021 0.0314086 0.991937 0 50.4194 GTEX-1HFI6-0011-R11b-SM-A96RU B1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 875 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99113 831226 0.941035 0.992657 0.725071 24565 1 76 0.00239161 273 0 1.16636e+08 0.058362 1.04511e+06 1.17498e+08 4.13242e+06 24611 5.80514e+07 0 0.215965 0.992657 0.719746 1.16636e+08 0.00256638 2.50089e+07 2.64357e+07 2.52174e+07 279 2.53485e+07 1.67652e+07 0.00247886 2.50388e+07 49.6928 0.00889468 0.994184 0 50.2075 GTEX-1HFI6-0011-R2a-SM-CMKH5 B1, A1 6.3 Brain Brain - Substantia nigra 0002038 875 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995603 952435 0.958895 0.99642 0.834575 25257 1 76 0.00227589 388 0 1.28345e+08 0.0406927 7.11213e+06 1.28806e+08 8.89272e+06 25284 6.39899e+07 0 0.12432 0.99642 0.831587 1.28345e+08 0.00290189 2.81808e+07 2.41135e+07 2.85674e+07 349 2.85759e+07 1.82927e+07 0.00258863 2.82825e+07 49.742 0.0552158 0.997237 0 50.3407 GTEX-1HFI6-0011-R3b-SM-A9SKB B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 875 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.99026 774284 0.959677 0.991771 0.839596 25638 1 76 0.00675107 275 0 1.2649e+08 0.0398824 6.56051e+06 1.2754e+08 2.2444e+07 25664 6.29761e+07 0 0.120081 0.991771 0.832687 1.2649e+08 0.00813362 2.74851e+07 2.89922e+07 2.79917e+07 310 2.79507e+07 1.6223e+07 0.00744129 2.76855e+07 49.7617 0.0514389 0.993282 0 50.4566 GTEX-1HFI6-0011-R4b-SM-A96RT B1, A1 6.9 Brain Brain - Amygdala 0001876 875 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993224 490189 0.957492 0.994564 0.836298 23673 1 76 0.0021044 272 0 7.79075e+07 0.0421596 4.01697e+06 7.83334e+07 2.52756e+06 23688 3.88244e+07 0 0.121194 0.994564 0.831752 7.79075e+07 0.00253156 1.70183e+07 1.47057e+07 1.72483e+07 262 1.72349e+07 9.48762e+06 0.00231769 1.71234e+07 49.8377 0.0512804 0.995903 0 50.3356 GTEX-1HFI6-0011-R5a-SM-A9G1J B1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 875 BP-65203 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988986 554358 0.955987 0.992847 0.822718 24557 1 76 0.00403493 270 0 9.69247e+07 0.0436687 5.66381e+06 9.7623e+07 8.56685e+06 24584 4.81804e+07 0 0.13327 0.992847 0.816832 9.69247e+07 0.0041308 2.10282e+07 2.61765e+07 2.11725e+07 279 2.13217e+07 1.10939e+07 0.00408206 2.11972e+07 49.8536 0.0580172 0.996707 0 50.1709 GTEX-1HFI6-0011-R6b-SM-CM2SR B1, A1 8.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 875 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994691 661991 0.957928 0.995706 0.819582 23616 1 76 0.00213473 286 0 9.17361e+07 0.041645 2.3988e+06 9.21317e+07 5.34276e+06 23642 4.57073e+07 0 0.138345 0.995706 0.816063 9.17361e+07 0.00262415 2.01761e+07 1.334e+07 2.03082e+07 316 2.02486e+07 1.42538e+07 0.00237919 2.03368e+07 50.1087 0.0260366 0.996721 0 50.1631 GTEX-1HFI6-0011-R7b-SM-CM2SS B1, A1 9.4 Brain Brain - Putamen (basal ganglia) 0001874 875 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994548 916988 0.960199 0.995727 0.850769 24775 1 76 0.00220882 376 0 1.1783e+08 0.0393375 6.30108e+06 1.18336e+08 7.20324e+06 24800 5.87067e+07 0 0.10943 0.995727 0.847133 1.1783e+08 0.00269512 2.57424e+07 2.27527e+07 2.60032e+07 350 2.60598e+07 1.59305e+07 0.00245168 2.58273e+07 49.776 0.0532476 0.996906 0 50.252 GTEX-1HFI6-0011-R8a-SM-ARZLP B1, A1 5.8 Brain Brain - Hypothalamus 0001898 875 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987863 1.03164e+06 0.952266 0.990031 0.80676 23496 1 76 0.00285088 137 0 6.13024e+07 0.0473891 3.77153e+06 6.19196e+07 2.7253e+06 23514 3.03932e+07 0 0.145505 0.990031 0.798718 6.13024e+07 0.00385953 1.32388e+07 1.55422e+07 1.34023e+07 156 1.36319e+07 7.65149e+06 0.0033541 1.31278e+07 49.058 0.0609101 0.9922 0 50.307 GTEX-1HFI6-0011-R9b-SM-CMKH4 B1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 875 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995109 757227 0.959146 0.996008 0.834438 23956 1 76 0.00242827 381 0 1.00242e+08 0.0405579 6.16743e+06 1.00644e+08 7.14102e+06 23976 4.9976e+07 0 0.124708 0.996008 0.831107 1.00242e+08 0.00303462 2.18988e+07 2.12239e+07 2.2508e+07 358 2.2333e+07 1.17662e+07 0.00273117 2.21641e+07 49.8102 0.0612797 0.996906 0 50.6859 GTEX-1HFI6-0126-SM-CNPPI 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40-50 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 900 1000 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984214 262721 0.972163 0.98753 0.794289 25025 1 76 0.00595231 163 0 8.89624e+07 0.0275919 331863 9.00858e+07 2.19868e+07 25050 4.42035e+07 0 0.177874 0.98753 0.784385 8.89624e+07 0.00950702 1.95143e+07 1.14321e+07 1.96121e+07 176 1.96788e+07 1.47134e+07 0.0077237 1.97367e+07 50.0735 0.00368386 0.990847 0 50.1249 GTEX-1HFI6-0226-SM-ADEHZ 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40-50 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 910 990 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982174 394976 0.976398 0.988829 0.832591 24082 1 76 0.00348531 302 0 1.03487e+08 0.0232112 508044 1.04656e+08 1.13467e+07 24115 5.12664e+07 0 0.143807 0.988829 0.82329 1.03487e+08 0.00386891 2.23048e+07 1.24138e+07 2.25723e+07 278 2.28646e+07 1.98973e+07 0.00367582 2.26207e+07 49.7319 0.00485444 0.995484 0 50.298 GTEX-1HFI6-0326-SM-ADEI5 0 B1 2 pieces; fascia/vascular elements are ~20% of tissue, rep delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 917 983 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981827 484168 0.972126 0.988181 0.783896 24441 1 76 0.00367282 215 0 9.24536e+07 0.0275482 641522 9.35594e+07 1.05712e+07 24474 4.57906e+07 0 0.188229 0.988181 0.774632 9.24536e+07 0.00341523 2.00889e+07 9.27358e+06 2.03848e+07 235 2.06584e+07 1.56951e+07 0.00354485 2.0335e+07 49.6055 0.00685684 0.994535 0 50.3654 GTEX-1HFI6-0426-SM-B2LXB 0 B1 2 pieces, interstitial/adherent fat/vascular elements are ~10% of tissue, rep delineated 8.2 Muscle Muscle - Skeletal 0011907 919 981 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.993331 593528 0.981942 0.994842 0.868702 21445 1 76 0.00231943 270 0 1.07042e+08 0.0178655 1.97287e+06 1.07597e+08 4.03507e+06 21459 5.33176e+07 0 0.11324 0.994842 0.864221 1.07042e+08 0.00351383 2.32765e+07 1.07326e+07 2.35598e+07 294 2.36e+07 2.16728e+07 0.00291572 2.33689e+07 49.754 0.0183358 0.996354 0 50.3024 GTEX-1HFI6-0526-SM-CGQFG 0 B1 2 pieces, no atherosis. Beware ~6mm extraneous fragments of fat/fibroadipose tissue present in section, delineated 8.2 Blood Vessel Artery - Tibial 0007610 922 978 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992637 700176 0.974 0.994514 0.814377 24912 1 76 0.00365241 384 0 1.72715e+08 0.0256295 729162 1.73668e+08 1.16107e+07 24958 8.60278e+07 0 0.159623 0.994514 0.809909 1.72715e+08 0.00395484 3.7323e+07 1.4066e+07 3.75407e+07 397 3.75553e+07 3.10679e+07 0.00379521 3.75574e+07 50.0014 0.00419861 0.996391 0 50.1454 GTEX-1HFI6-0626-SM-ACKX9 0 B1 2 pieces, trace adherent fat 7 Nerve Nerve - Tibial 0001323 925 975 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991602 297194 0.961382 0.993042 0.718037 25951 1 76 0.00308006 282 0 1.0546e+08 0.0383289 475560 1.06199e+08 1.3747e+07 26014 5.25148e+07 0 0.243345 0.993042 0.713041 1.0546e+08 0.00397759 2.30193e+07 1.09138e+07 2.31846e+07 269 2.32092e+07 1.47439e+07 0.00352818 2.31391e+07 49.9243 0.00447799 0.994482 0 50.1789 GTEX-1HFI6-0826-SM-9YFM2 1 B1 2 pieces, no abnormalities 7.3 Heart Heart - Atrial Appendage 0006631 927 973 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.992733 402906 0.975026 0.994057 0.764304 24937 1 76 0.00281894 269 0 1.09298e+08 0.0246358 2.47786e+06 1.09952e+08 3.86686e+06 24977 5.4444e+07 0 0.210722 0.994057 0.759762 1.09298e+08 0.00390107 2.37984e+07 1.21029e+07 2.38999e+07 310 2.39646e+07 1.54943e+07 0.00335928 2.38607e+07 49.8914 0.0225359 0.995381 0 50.1064 GTEX-1HFI6-0926-SM-9WPPV 1 B1 2 pieces, atalectasis, interstitial fibrosis/patchy hyaline membrane formation suggests component of diffuse alveolar damage 7 Lung Lung 0008952 933 967 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429,LCSET-7660 08/05/2015 TruSeq.v1 RNASEQ 0.989422 193785 0.966632 0.990805 0.747887 25229 1 76 0.00534993 169 0 8.61394e+07 0.0329877 298244 8.69388e+07 1.24676e+07 25268 4.28796e+07 0 0.218745 0.990805 0.74101 8.61394e+07 0.00564518 1.86545e+07 8.86955e+06 1.90338e+07 177 1.89997e+07 1.3623e+07 0.00549735 1.88009e+07 49.7371 0.0034305 0.992187 0 50.5032 GTEX-1HFI6-1126-SM-9WYUM 1 B1 6 pieces, confirmed target muscularis 6.6 Esophagus Esophagus - Muscularis 0004648 939 961 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992953 216629 0.96706 0.994101 0.790644 23970 1 76 0.00264948 373 0 1.0202e+08 0.0327427 2.29811e+06 1.02626e+08 6.47564e+06 24002 5.08209e+07 0 0.176416 0.994101 0.78598 1.0202e+08 0.00473379 2.20113e+07 8.62231e+06 2.2219e+07 336 2.2122e+07 1.27945e+07 0.00369043 2.22123e+07 50.1018 0.0223931 0.995249 0 50.2349 GTEX-1HFI6-1226-SM-A96SK 1 B1 6 pieces, squamous mucosa up to ~0.5mm, ~30-40% thickness. Submucosal mucus glands present, rep. delineated 6.9 Esophagus Esophagus - Mucosa 0006920 939 961 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993507 269337 0.973741 0.994687 0.788481 22761 1 76 0.00218373 204 0 8.01158e+07 0.0259988 434644 8.05437e+07 2.86135e+06 22778 3.99361e+07 0 0.18526 0.994687 0.784292 8.01158e+07 0.00246493 1.79264e+07 9.05515e+06 1.81089e+07 206 1.81132e+07 1.32588e+07 0.00232416 1.80142e+07 49.863 0.00539637 0.995867 0 50.2532 GTEX-1HFI6-1326-SM-A9SL8 1 B1 2 pieces, no abnormalities 6.5 Thyroid Thyroid 0002046 941 959 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988415 287957 0.960751 0.989962 0.710562 25076 1 76 0.00700666 122 0 7.64813e+07 0.0389653 170099 7.72568e+07 1.45175e+07 25125 3.80565e+07 0 0.250189 0.989962 0.70343 7.64813e+07 0.00809072 1.6608e+07 8.38109e+06 1.66853e+07 134 1.6715e+07 1.11297e+07 0.00754784 1.66929e+07 49.967 0.00220174 0.99151 0 50.116 GTEX-1HFI6-1526-SM-B2LXC 1 B1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 947 953 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99077 264455 0.966086 0.992227 0.786334 22856 1 76 0.00273264 137 0 6.46491e+07 0.0337218 1.24079e+06 6.51556e+07 3.1032e+06 22880 3.21647e+07 0 0.179753 0.992227 0.780221 6.46491e+07 0.00404996 1.39936e+07 5.54798e+06 1.41661e+07 161 1.41447e+07 8.35126e+06 0.00339034 1.41026e+07 49.9254 0.0190435 0.993683 0 50.3063 GTEX-1HFI6-1726-SM-CGQFH 1 B1 2 pieces, trace fascia/vascular elements 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 953 947 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991677 435371 0.973286 0.993283 0.791871 26617 1 76 0.00396447 382 0 1.59632e+08 0.0263655 613813 1.60712e+08 1.214e+07 26682 7.9492e+07 0 0.181415 0.993283 0.786552 1.59632e+08 0.00388958 3.5074e+07 1.70881e+07 3.53013e+07 416 3.5278e+07 2.66505e+07 0.00392907 3.53104e+07 50.023 0.00381935 0.994888 0 50.1615 GTEX-1HFI6-2326-SM-9WYUN 2 B1 2 pieces, glandular elements with advanced autolysis 6.3 Prostate Prostate 0002367 974 926 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992899 130534 0.963967 0.993945 0.758585 24476 1 76 0.00269062 134 0 6.33202e+07 0.0357811 523098 6.3706e+07 4.48146e+06 24501 3.15311e+07 0 0.205382 0.993945 0.753991 6.33202e+07 0.00451096 1.36973e+07 6.01459e+06 1.38221e+07 145 1.37758e+07 9.81772e+06 0.00359983 1.38125e+07 50.0665 0.00821113 0.994991 0 50.2268 GTEX-1HFI6-2826-SM-A8N9T 1 B1 2 pieces, ~90% glandular elements, delineated 7.4 Salivary Gland Minor Salivary Gland 0006330 980 920 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.982357 360053 0.972112 0.984541 0.797969 25222 1 76 0.0115133 223 0 1.0279e+08 0.0265062 379989 1.04404e+08 1.8938e+07 25250 5.10312e+07 0 0.174143 0.984541 0.785633 1.0279e+08 0.0111888 2.31882e+07 3.05984e+07 2.37654e+07 229 2.38364e+07 1.67954e+07 0.0113514 2.33482e+07 49.4827 0.00363961 0.986724 0 50.6147 GTEX-1HFI6-2926-SM-A9G3E 2 B1 1 piece, mainly adenohypophysis, 4x1mm nubbin of neurohypophysis, delineated 7 Pituitary Pituitary 0000007 1058 842 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986703 208853 0.957909 0.991179 0.739766 25755 1 76 0.00435879 118 0 6.27153e+07 0.0418099 630342 6.32734e+07 6.24879e+06 25785 3.1137e+07 0 0.218143 0.991179 0.733241 6.27153e+07 0.00392022 1.34622e+07 7.87848e+06 1.36988e+07 126 1.37924e+07 9.09434e+06 0.00414336 1.36245e+07 49.6938 0.00996219 0.995654 0 50.4355 GTEX-1HFI6-3026-SM-CNPPJ 1 B1 2 pieces, no abnormalities 5.8 Brain Brain - Cortex 0001870 1058 842 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985999 261077 0.967089 0.988949 0.839048 23713 1 76 0.00585323 197 0 8.14177e+07 0.0326174 4.69588e+06 8.23275e+07 1.92971e+07 23732 4.04762e+07 0 0.128041 0.988949 0.829776 8.14177e+07 0.00875989 1.78272e+07 1.06151e+07 1.83461e+07 208 1.82509e+07 9.35803e+06 0.00730222 1.81323e+07 49.8369 0.0570391 0.9919 0 50.7172 GTEX-1HFI6-3126-SM-A8N8J 1 B1 2 pieces, no abnormalities 7.5 Brain Brain - Cerebellum 0002037 1057 843 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984537 628205 0.940491 0.987047 0.699022 25678 1 76 0.0108628 157 0 1.04295e+08 0.0591019 1.22879e+06 1.05664e+08 1.75576e+07 25714 5.17863e+07 0 0.241469 0.987047 0.689968 1.04295e+08 0.0114693 2.23134e+07 2.45584e+07 2.25677e+07 201 2.26925e+07 1.29655e+07 0.0111653 2.2441e+07 49.7214 0.0116292 0.989557 0 50.2833 GTEX-1HFI7-0001-SM-EZ6LY B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -227 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988997 1.24571e+06 0.885896 0.990678 0.696573 19868 1 76 0.00263294 108 0 5.97153e+07 0.1129 257939 6.02772e+07 4.49345e+06 19887 2.97253e+07 0 0.189323 0.990678 0.69008 5.97153e+07 0.00375237 1.19822e+07 6.0484e+07 1.24349e+07 105 1.2478e+07 1.16691e+07 0.00319171 1.20385e+07 49.1036 0.00427922 0.992359 0 50.9271 GTEX-1HFI7-0003-SM-AG5YF B1 Blood Whole Blood 0013756 -227 BP-58091 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HFI7-0005-SM-ADEH1 B1 8.8 Blood Whole Blood 0013756 -227 BP-58083 RNA isolation_PAXgene Blood RNA (Manual) 11/14/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980777 2.18317e+06 0.918811 0.987296 0.761522 18254 1 76 0.00377592 132 0 8.63706e+07 0.0803268 411291 8.7482e+07 9.19794e+06 18261 4.27552e+07 0 0.157289 0.987296 0.751848 8.63706e+07 0.00398077 1.8154e+07 8.89402e+07 1.83558e+07 153 1.85992e+07 1.73979e+07 0.00387767 1.84801e+07 49.8394 0.00470144 0.993814 0 50.2765 GTEX-1HFI7-0126-SM-CGQFQ 0 B1 2 pieces; 50% fat/50% fibrocollagenous stroma with ducts/lobules 6.3 Breast Breast - Mammary Tissue 0008367 348 735 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991857 653435 0.973693 0.993613 0.816029 26063 1 76 0.00355696 527 0 1.81789e+08 0.0259773 1.78759e+06 1.82958e+08 1.25095e+07 26115 9.0587e+07 0 0.157663 0.993613 0.810817 1.81789e+08 0.00373556 3.97699e+07 2.06387e+07 4.01714e+07 422 4.01497e+07 2.82588e+07 0.00364131 4.003e+07 49.9253 0.00977053 0.995368 0 50.2511 GTEX-1HFI7-0326-SM-9WPOX 1 B1 2 pieces; mild fibrosis, ~10 and 40% fat/fibrous tissue 7.2 Thyroid Thyroid 0002046 361 722 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.986439 239577 0.968896 0.988044 0.75731 23946 1 76 0.00619007 134 0 7.39345e+07 0.0308356 466001 7.48291e+07 1.11872e+07 23980 3.682e+07 0 0.211587 0.988044 0.748255 7.39345e+07 0.00658468 1.62316e+07 7.26414e+06 1.63693e+07 143 1.63638e+07 1.17491e+07 0.00638706 1.63449e+07 49.971 0.00622754 0.989649 0 50.2112 GTEX-1HFI7-0426-SM-9YFLP 1 B1 6 pieces; atherosclerosis 6.8 Blood Vessel Artery - Aorta 0001496 369 714 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.993859 320829 0.978 0.994966 0.8518 22383 1 76 0.00222863 278 0 1.0099e+08 0.0215395 395386 1.01501e+08 3.47833e+06 22405 5.03349e+07 0 0.126199 0.994966 0.847512 1.0099e+08 0.00323754 2.19061e+07 6.95086e+06 2.21092e+07 312 2.2099e+07 2.04973e+07 0.00273253 2.20268e+07 49.9181 0.00389539 0.996072 0 50.2307 GTEX-1HFI7-0526-SM-A9SMA 1 B1 2 pieces; 1 is 30% fibrous, 2nd is 30% fibrous/fat 7.5 Heart Heart - Atrial Appendage 0006631 372 711 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988962 308287 0.983583 0.990475 0.82772 21322 1 76 0.00626802 269 0 1.05053e+08 0.016126 5.66974e+06 1.06064e+08 1.84869e+07 21336 5.23293e+07 0 0.155863 0.990475 0.819836 1.05053e+08 0.00787524 2.2196e+07 3.87923e+07 2.29523e+07 305 2.25862e+07 1.17121e+07 0.0070704 2.2621e+07 50.0385 0.0534561 0.991987 0 50.8375 GTEX-1HFI7-0626-SM-ADEI3 1 B1 2 pieces; both include significant residual fat, up to 2.3 mm (60 and 80%) 6.2 Blood Vessel Artery - Coronary 0001621 373 710 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982587 355978 0.975803 0.989196 0.830748 22317 1 76 0.00321241 165 0 7.7736e+07 0.0238864 834205 7.8585e+07 8.2142e+06 22341 3.85119e+07 0 0.145055 0.989196 0.821772 7.7736e+07 0.00349748 1.68928e+07 6.99625e+06 1.723e+07 190 1.73942e+07 1.33736e+07 0.00335399 1.71866e+07 49.6997 0.0106153 0.995804 0 50.4941 GTEX-1HFI7-0726-SM-ACKVN 0 B1 2 pieces; mature fat 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 379 704 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992279 240074 0.97561 0.993914 0.823942 22933 1 76 0.00266046 276 0 9.45592e+07 0.0241133 1.0745e+06 9.51382e+07 1.25344e+07 22959 4.71035e+07 0 0.151668 0.993914 0.818928 9.45592e+07 0.00345252 2.07132e+07 1.02727e+07 2.08958e+07 279 2.0896e+07 1.51963e+07 0.00305584 2.0855e+07 49.9508 0.0112941 0.99555 0 50.2194 GTEX-1HFI7-0826-SM-A9G23 0 B1 2 pieces 8 Heart Heart - Left Ventricle 0006566 386 697 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988032 182497 0.982718 0.992667 0.850765 21094 1 76 0.00360154 267 0 8.80178e+07 0.0170496 3.06745e+06 8.86681e+07 8.1984e+06 21106 4.37381e+07 0 0.131953 0.992667 0.844526 8.80178e+07 0.00355247 1.93463e+07 1.82125e+07 1.95197e+07 263 1.95043e+07 1.30974e+07 0.00357744 1.96838e+07 50.2291 0.0345947 0.997301 0 50.2231 GTEX-1HFI7-1026-SM-A9G3I 0 B1 6 pieces; target muscularis 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 401 682 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987968 240292 0.97437 0.992221 0.810101 23965 1 76 0.00359195 226 0 8.98208e+07 0.0252398 675161 9.0525e+07 7.93246e+06 23997 4.46258e+07 0 0.164269 0.992221 0.803799 8.98208e+07 0.00386403 1.94323e+07 8.05034e+06 1.97203e+07 231 1.98248e+07 1.58096e+07 0.00372563 1.96660e+07 49.7991 0.00745828 0.996474 0 50.3678 GTEX-1HFI7-1126-SM-A96S5 1 B1 6 pieces 5.7 Vagina Vagina 0000996 403 680 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991887 161272 0.966454 0.99322 0.733418 22650 1 76 0.00218818 122 0 5.50557e+07 0.0332867 305431 5.54315e+07 2.10782e+06 22678 2.7421e+07 0 0.233036 0.99322 0.728446 5.50557e+07 0.00259542 1.2008e+07 5.0478e+06 1.21691e+07 131 1.21478e+07 7.52529e+06 0.00239153 1.21009e+07 49.9032 0.00551006 0.994552 0 50.3332 GTEX-1HFI7-1226-SM-A8N7Z 1 B1 6 pieces; esophagitis with rare focus of invasive fungal elements 9.4 Esophagus Esophagus - Mucosa 0006920 412 671 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985688 373498 0.978747 0.987466 0.835344 24350 1 76 0.0108076 281 0 1.14383e+08 0.0206493 482657 1.15835e+08 2.02371e+07 24374 5.68832e+07 0 0.143403 0.987466 0.824873 1.14383e+08 0.010339 2.58843e+07 1.84923e+07 2.60695e+07 267 2.61554e+07 2.34743e+07 0.0105737 2.60041e+07 49.8549 0.00416675 0.989244 0 50.1783 GTEX-1HFI7-1326-SM-9WPOW 1 B1 6 pieces; target muscularis 8.6 Esophagus Esophagus - Muscularis 0004648 416 667 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.989531 151542 0.979913 0.991091 0.859128 21372 1 76 0.00601624 153 0 6.7261e+07 0.01975 760461 6.78656e+07 1.0363e+07 21386 3.35051e+07 0 0.120785 0.991091 0.851474 6.7261e+07 0.0065914 1.45608e+07 5.99983e+06 1.47019e+07 145 1.46839e+07 1.2618e+07 0.00630337 1.4675e+07 49.9848 0.0112054 0.992651 0 50.2412 GTEX-1HFI7-1526-SM-9WG7W 1 B1 6 pieces 7 Stomach Stomach 0000945 422 661 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.986156 196599 0.980654 0.988244 0.845814 23489 1 76 0.00238194 461 0 1.12761e+08 0.0189484 867073 1.14102e+08 8.22394e+06 23512 5.61477e+07 0 0.134839 0.988244 0.835871 1.12761e+08 0.00332927 2.58147e+07 1.11459e+08 2.6082e+07 370 2.6097e+07 2.91188e+07 0.0028546 2.6031e+07 49.9367 0.00759908 0.990332 0 50.2576 GTEX-1HFI7-1626-SM-9WYTR 1 B1 6 pieces; target muscularis 7.5 Colon Colon - Sigmoid 0001159 429 654 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994384 285833 0.974389 0.995474 0.819261 22880 1 76 0.00227071 278 0 9.52253e+07 0.0253009 1.08789e+06 9.56582e+07 6.20584e+06 22906 4.74608e+07 0 0.155128 0.995474 0.815553 9.52253e+07 0.00407734 2.05859e+07 7.94197e+06 2.08325e+07 280 2.08051e+07 1.65813e+07 0.00317304 2.07081e+07 49.8831 0.0113727 0.996565 0 50.2977 GTEX-1HFI7-1726-SM-A9G22 2 B1 4 pieces; partially autolyzed mucosa 6.2 Colon Colon - Transverse 0001157 435 648 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984098 202772 0.977158 0.990058 0.825074 23470 1 76 0.00385128 272 0 8.30072e+07 0.0220337 2.4013e+06 8.38407e+07 7.84061e+06 23498 4.11536e+07 0 0.152084 0.990058 0.816871 8.30072e+07 0.00401924 1.83498e+07 1.54478e+07 1.85561e+07 259 1.86617e+07 1.05551e+07 0.00393366 1.86604e+07 49.9984 0.0286412 0.996018 0 50.2795 GTEX-1HFI7-1826-SM-ACKXH 0 B1 6 pieces; includes up to 20% internal fat, epidermis measures 28-38 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 454 629 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991313 434235 0.96929 0.992706 0.743078 25144 1 76 0.00292936 315 0 1.08095e+08 0.0304053 708088 1.08889e+08 1.41111e+07 25191 5.38266e+07 0 0.226212 0.992706 0.737658 1.08095e+08 0.00363741 2.35763e+07 1.25382e+07 2.37541e+07 276 2.38082e+07 1.78091e+07 0.00328289 2.36654e+07 49.8496 0.00650282 0.9941 0 50.1878 GTEX-1HFI7-1926-SM-A96TQ 1 B1 2 pieces; minimal internal fat 7.3 Muscle Muscle - Skeletal 0011907 456 627 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991323 208617 0.979422 0.992645 0.852137 19524 1 76 0.00148517 133 0 6.45641e+07 0.0203854 978151 6.50425e+07 1.93673e+06 19537 3.21899e+07 0 0.127285 0.992645 0.84587 6.45641e+07 0.00203191 1.41699e+07 6.83824e+06 1.42744e+07 165 1.42534e+07 1.21531e+07 0.00175818 1.42628e+07 50.0165 0.0150386 0.993966 0 50.1837 GTEX-1HFI7-2026-SM-CGQFR 1 B1 2 pieces; up to 10% fibrous tissue 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 460 623 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993109 884229 0.974228 0.994725 0.799336 26413 1 76 0.00368601 529 0 1.96898e+08 0.0254223 1.35306e+06 1.97942e+08 1.36747e+07 26484 9.8107e+07 0 0.174892 0.994725 0.79512 1.96898e+08 0.00347391 4.32278e+07 2.13267e+07 4.36406e+07 430 4.36681e+07 3.17764e+07 0.00358583 4.34403e+07 49.8693 0.00683563 0.996342 0 50.2376 GTEX-1HFI7-2126-SM-CE6QT 1 B1 2 pieces; includes significant attached fat and skeletal muscle (up to 40%) 6.3 Nerve Nerve - Tibial 0001323 461 622 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.985702 437941 0.96131 0.987389 0.704394 24661 1 76 0.00767452 157 0 8.11826e+07 0.0384292 256988 8.22195e+07 1.21774e+07 24712 4.03481e+07 0 0.256916 0.987389 0.695511 8.11826e+07 0.00808634 1.7751e+07 7.86836e+06 1.78092e+07 153 1.78935e+07 1.14443e+07 0.00788008 1.78001e+07 49.8692 0.00312563 0.989076 0 50.0818 GTEX-1HFI7-2226-SM-B2LXU 1 B1 2 pieces 7 Blood Vessel Artery - Tibial 0007610 463 620 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989951 707979 0.972051 0.991884 0.809308 21093 1 76 0.0023755 148 0 6.96923e+07 0.027531 330825 7.02626e+07 3.52089e+06 21114 3.46244e+07 0 0.162742 0.991884 0.80274 6.96923e+07 0.00398617 1.4979e+07 4.3492e+06 1.50023e+07 161 1.50436e+07 1.25778e+07 0.00317926 1.50615e+07 50.0296 0.00470841 0.993818 0 50.0389 GTEX-1HFI7-2326-SM-CGQFS 1 B1 6 pieces; includes up to 30% attached (1.2mm) and internal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 470 613 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991647 550185 0.970494 0.993605 0.765787 26320 1 76 0.00359171 500 0 1.68452e+08 0.0292662 1.37404e+06 1.69537e+08 1.15153e+07 26383 8.38994e+07 0 0.204707 0.993605 0.76089 1.68452e+08 0.00403616 3.69967e+07 1.84341e+07 3.71814e+07 430 3.71769e+07 2.53283e+07 0.00380165 3.728e+07 50.0692 0.00810471 0.995564 0 50.1245 GTEX-1HFI7-2426-SM-B2LXV 1 B1 2 pieces; salivary gland elements with ~20% admixed and attached fat 8 Salivary Gland Minor Salivary Gland 0006330 475 608 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.9892 902077 0.967738 0.990889 0.767231 26076 1 76 0.00272213 287 0 1.06806e+08 0.0312193 551442 1.07788e+08 4.61836e+06 26124 5.30707e+07 0 0.200507 0.990889 0.760241 1.06806e+08 0.0036617 2.36946e+07 1.36177e+07 2.37134e+07 273 2.38395e+07 1.82548e+07 0.00319111 2.37337e+07 49.8888 0.00511598 0.992578 0 50.0198 GTEX-1HFI7-5004-SM-AN46U B1 Heart Heart - Left Ventricle 0006566 387 ChIP-Seq GTEX-1HGF4-0002-SM-EZ6M7 B1 9.4 Blood Cells - EBV-transformed lymphocytes EFO_0000572 709 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.992222 965504 0.957044 0.993653 0.816677 21812 1 76 0.00239785 286 0 1.21848e+08 0.0425396 824553 1.22627e+08 8.3088e+06 21848 6.0723e+07 0 0.140368 0.993653 0.811493 1.21848e+08 0.0033845 2.6739e+07 3.50464e+07 2.69872e+07 312 2.70353e+07 2.86496e+07 0.00289046 2.68615e+07 49.8387 0.0067241 0.995084 0 50.231 GTEX-1HGF4-0003-SM-AG5YE B1 Blood Whole Blood 0013756 709 BP-58119 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/17/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HGF4-0011-R10b-SM-CE6S5 B1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 760 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990488 599290 0.968994 0.991708 0.85027 24124 1 76 0.00781336 268 0 9.57094e+07 0.0305337 4.88327e+06 9.65096e+07 1.5853e+07 24144 4.76303e+07 0 0.118724 0.991708 0.84322 9.57094e+07 0.00681639 2.09992e+07 1.51553e+07 2.13151e+07 283 2.13307e+07 1.19791e+07 0.00731549 2.10774e+07 49.7013 0.0505988 0.992929 0 50.3733 GTEX-1HGF4-0011-R11a-SM-C1YRR B1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 760 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989944 849324 0.950493 0.992544 0.764588 24527 1 76 0.00196863 374 0 1.10644e+08 0.0490942 2.05969e+06 1.11475e+08 5.0437e+06 24569 5.50257e+07 0 0.185905 0.992544 0.758887 1.10644e+08 0.00237909 2.38702e+07 1.50851e+07 2.409e+07 332 2.41948e+07 1.42766e+07 0.00217332 2.40135e+07 49.8119 0.0184767 0.995144 0 50.2291 GTEX-1HGF4-0011-R1a-SM-CJI3S B1, A1 5.9 Brain Brain - Hippocampus 0001954 760 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.986964 804500 0.970814 0.98928 0.847541 21862 1 76 0.0017465 370 0 8.2593e+07 0.0289869 9.44012e+06 8.3488e+07 4.79552e+06 21874 4.10627e+07 0 0.123272 0.98928 0.838456 8.2593e+07 0.00269991 1.79937e+07 2.52705e+07 1.85663e+07 367 1.84119e+07 6.83252e+06 0.00222209 1.82947e+07 49.8404 0.113072 0.991597 0 50.7831 GTEX-1HGF4-0011-R3b-SM-CL54W B1, A1 8.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 760 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992018 635471 0.966379 0.994115 0.851817 22077 1 76 0.0023076 259 0 7.34998e+07 0.0333518 7.1986e+06 7.3935e+07 8.79987e+06 22090 3.65804e+07 0 0.114562 0.994115 0.846804 7.34998e+07 0.00381672 1.58404e+07 2.01635e+07 1.6577e+07 263 1.63524e+07 6.28647e+06 0.00306057 1.61873e+07 49.7464 0.0973639 0.996211 0 51.1362 GTEX-1HGF4-0011-R5b-SM-CM2ST B1, A1 9.5 Brain Brain - Caudate (basal ganglia) 0001873 760 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994514 1.05226e+06 0.960835 0.995754 0.837721 24989 1 76 0.00173864 373 0 1.30946e+08 0.0388319 9.03213e+06 1.31505e+08 7.31652e+06 25016 6.52578e+07 0 0.123114 0.995754 0.834164 1.30946e+08 0.00239934 2.8445e+07 3.48372e+07 2.87544e+07 366 2.87086e+07 1.41718e+07 0.00206858 2.86404e+07 49.9405 0.068683 0.996995 0 50.2704 GTEX-1HGF4-0011-R6a-SM-A96S1 B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 760 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993268 475596 0.960786 0.994478 0.817529 23887 1 76 0.00178501 268 0 8.9357e+07 0.0389113 5.87804e+06 8.98532e+07 2.88139e+06 23911 4.45327e+07 0 0.143258 0.994478 0.813014 8.9357e+07 0.00201686 1.94506e+07 2.11673e+07 1.96675e+07 292 1.96979e+07 9.22545e+06 0.00190079 1.95191e+07 49.772 0.0654182 0.995688 0 50.2773 GTEX-1HGF4-0011-R7a-SM-A96S2 B1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 760 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993197 483534 0.961976 0.994419 0.819341 23530 1 76 0.00175757 266 0 8.95263e+07 0.0378045 6.89249e+06 9.00287e+07 3.005e+06 23548 4.46239e+07 0 0.142636 0.994419 0.814768 8.95263e+07 0.00195945 1.95397e+07 2.59916e+07 1.95696e+07 304 1.96659e+07 7.93827e+06 0.00185839 1.95395e+07 49.8389 0.0765588 0.995641 0 50.0382 GTEX-1HGF4-0011-R8b-SM-CKZP9 B1, A1 7.2 Brain Brain - Hypothalamus 0001898 760 BP-71345 RNA isolation_PAXgene Tissue miRNA 02/01/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991484 510408 0.966732 0.994035 0.847299 23952 1 76 0.0018288 372 0 8.81878e+07 0.0330373 6.50445e+06 8.87169e+07 8.12446e+06 23975 4.38973e+07 0 0.119433 0.994035 0.842246 8.81878e+07 0.00347162 1.93689e+07 1.64323e+07 1.97356e+07 342 1.96598e+07 8.72307e+06 0.0026481 1.96302e+07 49.9624 0.0733169 0.996587 0 50.4688 GTEX-1HGF4-0011-R9a-SM-ADEH9 B1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 760 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981532 453781 0.966817 0.988395 0.845611 19946 1 76 0.00337421 379 0 8.7404e+07 0.0330361 1.04765e+07 8.84302e+07 9.55420e+06 19957 4.32947e+07 0 0.121205 0.988395 0.835798 8.7404e+07 0.00342484 1.85179e+07 2.71772e+07 2.02031e+07 347 2.01707e+07 5.78177e+06 0.00339935 1.90452e+07 48.5651 0.118472 0.995258 0 52.1761 GTEX-1HGF4-0126-SM-CNPPX 1 B1 6 pieces; well trimmed; 10% dermal fat; several hair follicles 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 742 1317 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.980621 307361 0.969825 0.984086 0.781869 23167 1 76 0.00580987 156 0 7.17315e+07 0.0299744 859240 7.28915e+07 1.92231e+07 23196 3.56387e+07 0 0.187956 0.984086 0.769427 7.17315e+07 0.00881625 1.56994e+07 1.11489e+07 1.59448e+07 153 1.59809e+07 1.02342e+07 0.00730777 1.58979e+07 49.8699 0.0117879 0.987551 0 50.3876 GTEX-1HGF4-0226-SM-CNNQL 1 B1 2 pieces; 10% fibrous content in 1 piece; minimal in the other 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 743 1316 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990657 254168 0.97616 0.99314 0.776651 24204 1 76 0.00234992 275 0 1.02988e+08 0.0235528 1.13555e+06 1.037e+08 1.13527e+07 24234 5.12557e+07 0 0.199508 0.99314 0.771323 1.02988e+08 0.00388526 2.26562e+07 1.27868e+07 2.29878e+07 303 2.30449e+07 1.59163e+07 0.00311567 2.28399e+07 49.7766 0.0109504 0.995623 0 50.3632 GTEX-1HGF4-0726-SM-9WYU9 1 B1 2 pieces; minmal extraneous tissue 6.3 Thyroid Thyroid 0002046 758 1301 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.991564 206833 0.965586 0.993317 0.726146 23874 1 76 0.00248425 155 0 7.42856e+07 0.0341522 557564 7.47854e+07 5.04316e+06 23907 3.69916e+07 0 0.23944 0.993317 0.721293 7.42856e+07 0.00453437 1.62765e+07 9.07792e+06 1.64308e+07 170 1.64367e+07 9.30439e+06 0.0035075 1.63943e+07 49.9354 0.00745552 0.99507 0 50.236 GTEX-1HGF4-0926-SM-9WPP8 1 B1 6 pieces; epithelium focally fragmented 7 Esophagus Esophagus - Mucosa 0006920 763 1296 BP-63441 RNA Extraction from Paxgene-derived Lysate Plate Based 05/12/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.988127 179265 0.973572 0.989814 0.762014 22420 1 76 0.00633987 128 0 6.93534e+07 0.0262653 644750 7.00671e+07 1.08731e+07 22438 3.45412e+07 0 0.211558 0.989814 0.754252 6.93534e+07 0.00703689 1.55878e+07 8.91215e+06 1.57251e+07 143 1.57318e+07 9.64852e+06 0.00668778 1.56947e+07 49.941 0.0092019 0.991501 0 50.2192 GTEX-1HGF4-2326-SM-A8NA2 1 B1 2 pieces; mild to moderate atrophy with fibrosis and ductal dilatation; 30% external fibrous and fatty content 7 Salivary Gland Minor Salivary Gland 0006330 791 1268 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.982408 351303 0.960658 0.985108 0.694732 26414 1 76 0.0111489 151 0 8.889e+07 0.0376116 276902 9.02338e+07 1.55712e+07 26470 4.40669e+07 0 0.265926 0.985108 0.684385 8.889e+07 0.011694 1.94551e+07 1.32562e+07 1.9622e+07 155 1.97387e+07 1.15846e+07 0.0114207 1.95708e+07 49.7865 0.00306872 0.987807 0 50.2135 GTEX-1HGF4-2426-SM-ACKXM 1 B1 6 pieces; well trimmed; 5% dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 826 1233 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991513 275424 0.974069 0.993264 0.796651 24421 1 76 0.00286746 299 0 1.02847e+08 0.0256509 931718 1.03545e+08 1.43727e+07 24456 5.12077e+07 0 0.177418 0.993264 0.791285 1.02847e+08 0.00403729 2.26035e+07 1.2413e+07 2.28729e+07 293 2.28726e+07 1.75323e+07 0.00345134 2.27744e+07 49.8925 0.0089982 0.995016 0 50.2962 GTEX-1HGF4-2526-SM-ADEIZ 1 B1 2 pieces; 10% fibrous content 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 831 1228 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981341 338124 0.972198 0.987974 0.774527 24647 1 76 0.00341473 276 0 9.59628e+07 0.0275034 817834 9.71309e+07 1.03722e+07 24691 4.75354e+07 0 0.19767 0.987974 0.765213 9.59628e+07 0.00369495 2.08731e+07 1.07995e+07 2.12179e+07 273 2.14517e+07 1.44941e+07 0.0035539 2.12041e+07 49.7097 0.00841991 0.994607 0 50.4096 GTEX-1HGF4-2626-SM-CM2SJ 1 B1 2 pieces; 1 piece has 30% internal fat content 8.1 Muscle Muscle - Skeletal 0011907 839 1220 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994018 625801 0.979954 0.995534 0.865267 20821 1 76 0.00168604 376 0 1.14324e+08 0.0198286 980495 1.14837e+08 6.9783e+06 20835 5.69678e+07 0 0.114687 0.995534 0.861402 1.14324e+08 0.00230671 2.48929e+07 1.63596e+07 2.51829e+07 349 2.52345e+07 2.35585e+07 0.00199591 2.49863e+07 49.7529 0.00853812 0.99705 0 50.2896 GTEX-1HGF4-2726-SM-CM2SK 1 B1 2 pieces: 1 with 2.3x0.6mm adherent skeletal muscle; other has 60% external fat content 5.8 Nerve Nerve - Tibial 0001323 841 1218 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992131 258695 0.965858 0.993411 0.730239 24827 1 76 0.00202308 236 0 9.65079e+07 0.0338458 376334 9.7148e+07 5.95652e+06 24878 4.80541e+07 0 0.235619 0.993411 0.725428 9.65079e+07 0.00301014 2.12463e+07 8.52103e+06 2.13052e+07 248 2.13402e+07 1.40298e+07 0.00251598 2.13312e+07 49.9894 0.00387382 0.994692 0 50.0692 GTEX-1HGF4-2826-SM-ADEII 1 B1 2 pieces; extensive medial calcification 7.8 Blood Vessel Artery - Tibial 0007610 847 1212 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981762 210272 0.973467 0.988072 0.812905 22209 1 76 0.00331931 162 0 7.61967e+07 0.0262188 415509 7.71166e+07 8.14821e+06 22236 3.77389e+07 0 0.160561 0.988072 0.803209 7.61967e+07 0.00361417 1.64239e+07 8.61888e+06 1.66371e+07 182 1.67757e+07 1.29482e+07 0.0034658 1.67163e+07 49.9114 0.00538807 0.994382 0 50.3225 GTEX-1HGF4-2926-SM-B2LXW 1 B1 1 piece; no neural tissue in this cut 7.4 Pituitary Pituitary 0000007 896 1163 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723,LCSET-9169 05/22/2016 TruSeq.v1 RNASEQ 0.978845 439305 0.958624 0.980609 0.743722 25298 1 76 0.0064605 140 0 7.45657e+07 0.0411026 498494 7.60402e+07 1.51099e+07 25340 3.69835e+07 0 0.214902 0.980609 0.7293 7.45657e+07 0.00760768 1.59345e+07 7.30286e+06 1.61467e+07 154 1.62305e+07 9.87044e+06 0.00703306 1.59802e+07 49.6114 0.00655566 0.982372 0 50.3307 GTEX-1HGF4-3026-SM-A8N89 1 B1 2 pieces 7.1 Brain Brain - Cerebellum 0002037 908 1151 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.98441 511264 0.942436 0.986979 0.690497 26259 1 76 0.0110995 200 0 1.04655e+08 0.057217 1.60249e+06 1.06036e+08 1.94825e+07 26302 5.19699e+07 0 0.251938 0.986979 0.681506 1.04655e+08 0.0110664 2.24199e+07 2.15846e+07 2.2697e+07 223 2.28099e+07 1.20069e+07 0.011083 2.25626e+07 49.7274 0.0151127 0.989548 0 50.3072 GTEX-1HGF4-3126-SM-CL54M 1 B1 2 pieces 5.9 Brain Brain - Cortex 0001870 908 1151 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992179 580805 0.966809 0.994247 0.814105 25501 1 76 0.00234179 372 0 1.29923e+08 0.0328857 6.65541e+06 1.30674e+08 1.56884e+07 25532 6.46818e+07 0 0.152704 0.994247 0.809422 1.29923e+08 0.00439113 2.84628e+07 2.00649e+07 2.89099e+07 401 2.89037e+07 1.42636e+07 0.00336433 2.86801e+07 49.8059 0.0509313 0.996316 0 50.3896 GTEX-1HKZK-0001-SM-EZ6M1 B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -81 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.992267 691402 0.969375 0.993548 0.818096 22756 1 76 0.00255927 289 0 1.17125e+08 0.0301373 745997 1.17886e+08 8.25668e+06 22793 5.83791e+07 0 0.151279 0.993548 0.812818 1.17125e+08 0.00334782 2.60522e+07 1.4883e+07 2.61748e+07 292 2.62096e+07 2.76162e+07 0.00295304 2.61586e+07 49.9513 0.00632813 0.994828 0 50.1174 GTEX-1HKZK-0004-SM-AG5ZY B1 Blood Whole Blood 0013756 -81 BP-58293 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HKZK-0005-SM-ARL73 B1 9.1 Blood Whole Blood 0013756 -81 BP-58459 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990095 1.55062e+06 0.942357 0.99048 0.787381 18104 1 76 0.00202102 112 0 6.01043e+07 0.0571868 217100 6.0682e+07 3.42684e+06 18118 2.98214e+07 0 0.154976 0.99048 0.779885 6.01043e+07 0.0026277 1.2997e+07 3.25283e+07 1.3013e+07 123 1.33796e+07 1.21024e+07 0.00232424 1.26771e+07 48.6519 0.00357767 0.990865 0 50.0308 GTEX-1HKZK-0126-SM-B2LWF 1 B1 2 pieces (fragmented); adrenal cortex and medulla 7.1 Adrenal Gland Adrenal Gland 0002369 469 628 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991649 698696 0.975374 0.99356 0.820921 23528 1 76 0.0026472 201 0 8.71331e+07 0.024227 1.49454e+06 8.76979e+07 3.65816e+06 23559 4.33431e+07 0 0.154453 0.99356 0.815634 8.71331e+07 0.0039506 1.93244e+07 9.67492e+06 1.95173e+07 241 1.95877e+07 1.35187e+07 0.00329765 1.93983e+07 49.7571 0.0170419 0.995471 0 50.2484 GTEX-1HKZK-0226-SM-9WYUG 1 B1 2 pieces (fragmented) 8.6 Muscle Muscle - Skeletal 0011907 597 500 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.994856 227498 0.981695 0.995938 0.864518 21151 1 76 0.00234709 284 0 9.92417e+07 0.0180641 1.1577e+06 9.96465e+07 6.50448e+06 21168 4.94902e+07 0 0.117177 0.995938 0.861006 9.92417e+07 0.00398871 2.17874e+07 1.04306e+07 2.20063e+07 288 2.19658e+07 1.89852e+07 0.00316701 2.19166e+07 49.9439 0.011618 0.997019 0 50.2499 GTEX-1HKZK-0326-SM-9WYUH 0 B1 6 pieces; epidermis measures about 44 microns, small portion of internal (periadnexal) fat 7 Skin Skin - Sun Exposed (Lower leg) 0004264 600 497 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993187 147786 0.968505 0.994462 0.753082 25392 1 76 0.00265837 281 0 9.71327e+07 0.0312876 1.0085e+06 9.76736e+07 6.75886e+06 25434 4.84072e+07 0 0.215423 0.994462 0.748912 9.71327e+07 0.00442178 2.12658e+07 1.01665e+07 2.15432e+07 278 2.14941e+07 1.3639e+07 0.00353894 2.14296e+07 49.9248 0.0103252 0.995738 0 50.324 GTEX-1HKZK-0526-SM-ADEJB 1 B1 2 pieces; relatively well trimmed 7.3 Blood Vessel Artery - Tibial 0007610 604 493 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982086 442024 0.974561 0.988646 0.807601 23570 1 76 0.00338602 282 0 1.16304e+08 0.0250458 370473 1.17639e+08 1.29228e+07 23607 5.76132e+07 0 0.166959 0.988646 0.798432 1.16304e+08 0.00347562 2.50563e+07 9.93428e+06 2.52943e+07 303 2.55915e+07 2.23575e+07 0.00343053 2.5442e+07 49.8535 0.00314923 0.995207 0 50.2363 GTEX-1HKZK-0626-SM-ADEHP 1 B1 2 pieces; includes ~20% attached and internal fat 6.2 Nerve Nerve - Tibial 0001323 605 492 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982162 385808 0.965566 0.988531 0.717854 24842 1 76 0.00364819 177 0 8.9821e+07 0.0341648 282118 9.08631e+07 1.01723e+07 24888 4.44919e+07 0 0.247712 0.988531 0.709622 8.9821e+07 0.0033905 1.95192e+07 9.20289e+06 1.97832e+07 193 2.00036e+07 1.32118e+07 0.00352018 1.98125e+07 49.7601 0.00310487 0.994901 0 50.3359 GTEX-1HKZK-0726-SM-ACKW2 0 B1 6 pieces; well trimmed, include <10% internal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 639 458 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991113 169210 0.972677 0.992953 0.748119 23240 1 76 0.00291895 177 0 7.40811e+07 0.0271215 692299 7.46069e+07 1.01824e+07 23274 3.68928e+07 0 0.224557 0.992953 0.742847 7.40811e+07 0.00390757 1.63763e+07 8.41117e+06 1.65637e+07 167 1.65486e+07 1.05181e+07 0.00341234 1.65218e+07 49.9595 0.00927929 0.994793 0 50.2845 GTEX-1HKZK-0826-SM-A9G2C 1 B1 2 pieces; mild interstitial fibrosis 7.4 Thyroid Thyroid 0002046 642 455 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985342 344717 0.966145 0.990083 0.747703 24762 1 76 0.00419153 161 0 8.92777e+07 0.0335577 262374 9.0172e+07 9.04368e+06 24804 4.43201e+07 0 0.218442 0.990083 0.740288 8.92777e+07 0.00388824 1.93937e+07 9.37418e+06 1.97055e+07 182 1.98565e+07 1.43503e+07 0.00404259 1.96264e+07 49.7087 0.00290971 0.994824 0 50.3987 GTEX-1HKZK-1126-SM-9WG82 1 B1 2 pieces; smaller piece is 50% fat/50% parenchyma, islets are well visualized, mild intralobular fibrosis 7.8 Pancreas Pancreas 0001150 656 441 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.992361 297493 0.966599 0.994573 0.797454 24069 1 76 0.00251485 205 0 1.11494e+08 0.0331699 315323 1.12102e+08 7.99675e+06 24107 5.55111e+07 0 0.169145 0.994573 0.793127 1.11494e+08 0.00348686 2.50833e+07 1.9922e+07 2.53706e+07 230 2.54265e+07 2.65099e+07 0.00299977 2.52709e+07 49.8465 0.00281282 0.996786 0 50.2846 GTEX-1HKZK-1226-SM-9WYUR 0 B1 6 pieces; target muscularis with up to 20% attached fat 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 658 439 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.992883 243403 0.969878 0.994479 0.771086 24471 1 76 0.0025365 277 0 9.5157e+07 0.0299028 521435 9.56853e+07 6.29365e+06 24511 4.74047e+07 0 0.198791 0.994479 0.766829 9.5157e+07 0.00438598 2.07768e+07 9.26423e+06 2.09984e+07 269 2.09927e+07 1.43832e+07 0.00345975 2.09248e+07 49.919 0.00544948 0.996076 0 50.2653 GTEX-1HKZK-1326-SM-A9G2D 0 B1 6 pieces; target muscularis, attached vessels/fat 7.5 Esophagus Esophagus - Muscularis 0004648 662 435 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985816 201215 0.970775 0.990951 0.780181 23098 1 76 0.00392236 141 0 6.87124e+07 0.0289761 354972 6.93399e+07 6.48249e+06 23120 3.41005e+07 0 0.190593 0.990951 0.773122 6.87124e+07 0.00429112 1.48398e+07 6.45698e+06 1.50886e+07 146 1.51732e+07 1.03399e+07 0.00410337 1.50729e+07 49.8341 0.0051193 0.996085 0 50.4156 GTEX-1HKZK-1426-SM-A96U1 0 B1 6 pieces 8.9 Esophagus Esophagus - Mucosa 0006920 663 434 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.993521 401816 0.973688 0.994202 0.802602 25544 1 76 0.00240786 393 0 1.79183e+08 0.0258873 546829 1.80228e+08 1.05569e+07 25598 8.93722e+07 0 0.171086 0.994202 0.797948 1.79183e+08 0.00278725 4.02903e+07 2.58707e+07 4.04896e+07 347 4.04846e+07 3.60445e+07 0.00259743 4.04152e+07 49.9571 0.0030341 0.994883 0 50.1233 GTEX-1HKZK-1526-SM-B2LWG 1 B1 6 pieces; full thickness sections, well preserved 6.2 Stomach Stomach 0000945 664 433 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.98233 380486 0.980322 0.984444 0.833501 22322 1 76 0.00242374 337 0 8.04849e+07 0.0193229 607259 8.17568e+07 3.30585e+06 22342 3.99873e+07 0 0.146821 0.984444 0.820535 8.04849e+07 0.00367368 1.86004e+07 8.86589e+07 1.87115e+07 240 1.88243e+07 2.02889e+07 0.00304737 1.8654e+07 49.7729 0.00742763 0.986558 0 50.1489 GTEX-1HKZK-1626-SM-B2LWH 1 B1 2 pieces; fibromuscular stroma with admixed glands, numerous corpora amylacea, some sloughing 6 Prostate Prostate 0002367 665 432 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990119 593442 0.951345 0.992035 0.728865 25029 1 76 0.00252696 148 0 7.33537e+07 0.0484412 379710 7.39427e+07 3.21526e+06 25066 3.6474e+07 0 0.22248 0.992035 0.72306 7.33537e+07 0.00420163 1.58021e+07 1.65504e+07 1.60131e+07 163 1.60484e+07 1.01361e+07 0.00336267 1.5904e+07 49.7742 0.00513519 0.993951 0 50.3316 GTEX-1HKZK-1726-SM-ADEJ9 0 B1 2 pieces; mature fat, minimal fibrous tissue, focal collection of lymphocytes 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 668 429 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982538 444876 0.976336 0.989185 0.810921 23698 1 76 0.00349105 280 0 1.04013e+08 0.0233764 1.01499e+06 1.0515e+08 1.13295e+07 23729 5.15352e+07 0 0.165415 0.989185 0.802151 1.04013e+08 0.00370775 2.26771e+07 1.30831e+07 2.31625e+07 299 2.34098e+07 1.59432e+07 0.00359867 2.30393e+07 49.6011 0.00965284 0.995833 0 50.5295 GTEX-1HKZK-1826-SM-ADEJ2 1 B1 2 pieces; 1 is fat admixed with fibrocollagenous stroma, 2nd is 20% fat with 80% dense fibrous stroma with scattered ducts, focus of nerves/larger vessels 6 Breast Breast - Mammary Tissue 0008367 671 426 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982058 280272 0.966024 0.988463 0.73132 24774 1 76 0.00364739 170 0 8.02732e+07 0.0337088 481042 8.12102e+07 9.26282e+06 24814 3.97733e+07 0 0.234703 0.988463 0.722883 8.02732e+07 0.00322579 1.74633e+07 7.95481e+06 1.77203e+07 169 1.79119e+07 1.21359e+07 0.00343796 1.77282e+07 49.7423 0.00592342 0.994867 0 50.3652 GTEX-1HKZK-1926-SM-9WPPK 2 B1 2 pieces; some increased peritubular fibrosis 6.3 Testis Testis 0000473 674 423 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.985653 211847 0.907138 0.987481 0.69311 32249 1 76 0.00645794 124 0 5.9392e+07 0.0924801 421024 6.0145e+07 9.50073e+06 32297 2.95678e+07 0 0.214029 0.987481 0.684433 5.9392e+07 0.00711685 1.18484e+07 1.00547e+07 1.19501e+07 102 1.19875e+07 9.56558e+06 0.00678679 1.19018e+07 49.8206 0.00700015 0.989309 0 50.2136 GTEX-1HKZK-2026-SM-9WYUF 1 B1 6 pieces; target musculariss 7.6 Colon Colon - Sigmoid 0001159 676 421 BP-63487 RNA Extraction from Paxgene-derived Lysate Plate Based 05/13/2015 LCSET-7430 07/22/2015 TruSeq.v1 RNASEQ 0.993471 201792 0.972306 0.994761 0.787243 23945 1 76 0.00250552 277 0 9.03946e+07 0.0274598 585645 9.08707e+07 6.03798e+06 23978 4.50493e+07 0 0.185063 0.994761 0.783118 9.03946e+07 0.00445881 1.96266e+07 8.21014e+06 1.97924e+07 256 1.97698e+07 1.38311e+07 0.0034809 1.97557e+07 49.9822 0.00644482 0.99605 0 50.2104 GTEX-1HKZK-2126-SM-A9SL3 2 B1 6 pieces; moderately autolyzed mucosa and muscularis 7.8 Colon Colon - Transverse 0001157 677 420 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989629 267360 0.973166 0.991234 0.784454 25064 1 76 0.00675397 171 0 9.00197e+07 0.0262271 678258 9.08158e+07 1.65215e+07 25095 4.48083e+07 0 0.188712 0.991234 0.777578 9.00197e+07 0.0079883 1.97318e+07 1.01494e+07 1.99759e+07 180 1.99929e+07 1.39127e+07 0.00737014 1.9843e+07 49.8119 0.00746851 0.99284 0 50.3073 GTEX-1HKZK-2226-SM-A8NA8 2 B1 6 pieces; moderately autolyzed mucosa, but with good lymphoid component 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 678 419 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983742 341281 0.954624 0.986581 0.723919 25650 1 76 0.011206 125 0 7.58926e+07 0.0446915 309928 7.69248e+07 1.41682e+07 25686 3.76683e+07 0 0.230705 0.986581 0.714204 7.58926e+07 0.0116336 1.64129e+07 1.31737e+07 1.66308e+07 136 1.67144e+07 1.05829e+07 0.0114192 1.65387e+07 49.7359 0.00402897 0.98942 0 50.3297 GTEX-1HR98-0004-SM-AG5ZT C1 Blood Whole Blood 0013756 1204 BP-58295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HR98-0005-SM-A9SKM C1 7 Blood Whole Blood 0013756 1204 BP-58459 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.952758 303671 0.978001 0.95429 0.794385 17170 1 76 0.00673373 90 0 6.46605e+07 0.019945 171252 6.77577e+07 1.21439e+07 17173 3.21275e+07 0 0.183616 0.95429 0.758074 6.46605e+07 0.00889482 1.52535e+07 1.17232e+08 1.53653e+07 109 1.53597e+07 1.6999e+07 0.00781254 1.53869e+07 50.0442 0.00252742 0.955822 0 50.1826 GTEX-1HR98-0011-R1a-SM-ARZLQ C1, A1 5.9 Brain Brain - Hippocampus 0001954 1225 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985112 395015 0.967347 0.988095 0.810208 20290 1 76 0.00341122 156 0 6.71614e+07 0.032553 1.12177e+07 6.79705e+07 3.05447e+06 20303 3.33392e+07 0 0.157139 0.988095 0.800563 6.71614e+07 0.00459164 1.39252e+07 3.7658e+07 1.5056e+07 201 1.48453e+07 3.74636e+06 0.00399965 1.42414e+07 48.9619 0.165038 0.991079 0 51.951 GTEX-1HR98-0011-R2a-SM-ARL7A C1, A1 6 Brain Brain - Substantia nigra 0002038 1225 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.993138 550580 0.965041 0.993453 0.833921 21550 1 76 0.00217952 139 0 5.26853e+07 0.0347004 5.00998e+06 5.30325e+07 3.4405e+06 21563 2.61971e+07 0 0.13112 0.993453 0.828461 5.26853e+07 0.00266356 1.1611e+07 1.07708e+07 1.17597e+07 146 1.18106e+07 6.45919e+06 0.00242146 1.15728e+07 49.4917 0.09447 0.993769 0 50.3182 GTEX-1HR98-0011-R3b-SM-A9G1U C1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1225 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98525 455406 0.958264 0.990927 0.833304 22321 1 76 0.00482126 267 0 7.72871e+07 0.0416143 9.24865e+06 7.79947e+07 7.88046e+06 22331 3.83527e+07 0 0.12496 0.990927 0.825744 7.72871e+07 0.00476901 1.65576e+07 2.58466e+07 1.73034e+07 254 1.71652e+07 4.69008e+06 0.00479563 1.70457e+07 49.8253 0.11858 0.996604 0 51.1012 GTEX-1HR98-0011-R5a-SM-A9G1V C1, A1 6.5 Brain Brain - Caudate (basal ganglia) 0001873 1225 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987065 585809 0.962528 0.991161 0.822948 23418 1 76 0.00463769 266 0 9.93135e+07 0.0372109 8.82755e+06 1.00199e+08 9.68797e+06 23436 4.93609e+07 0 0.13958 0.991161 0.815674 9.93135e+07 0.00420204 2.14374e+07 4.00288e+07 2.17958e+07 287 2.17536e+07 8.10615e+06 0.00442359 2.18015e+07 50.055 0.0881 0.995256 0 50.4145 GTEX-1HR98-0011-R9b-SM-ARL79 C1, A1 5.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1225 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992698 529575 0.954356 0.993177 0.819182 20626 1 76 0.00246955 154 0 5.32844e+07 0.0455044 6.06274e+06 5.36505e+07 3.60506e+06 20632 2.65101e+07 0 0.135173 0.993177 0.813593 5.32844e+07 0.00296869 1.15051e+07 2.0531e+07 1.17745e+07 154 1.17314e+07 4.50081e+06 0.002719 1.15746e+07 49.6637 0.113004 0.993656 0 50.5786 GTEX-1HR98-0126-SM-B2LWI 1 C1 6 pieces; well trimmed;dermal fat <5% 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1357 1067 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.987596 1.20667e+06 0.971852 0.990059 0.774055 23675 1 76 0.00268829 161 0 7.0397e+07 0.0278757 318171 7.11038e+07 3.21115e+06 23705 3.49457e+07 0 0.197796 0.990059 0.766361 7.0397e+07 0.00387416 1.54152e+07 9.06071e+06 1.54252e+07 154 1.55107e+07 1.19303e+07 0.00327975 1.54938e+07 49.9727 0.00447474 0.992523 0 50.0162 GTEX-1HR98-0226-SM-CGQEK 1 C1 2 pieces; 10% fibrovascular content 7 Adipose Tissue Adipose - Subcutaneous 0002190 1358 1066 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993144 488719 0.977958 0.994699 0.815887 25520 1 76 0.00376301 381 0 1.59785e+08 0.021747 746178 1.60636e+08 1.1177e+07 25576 7.96043e+07 0 0.162071 0.994699 0.811562 1.59785e+08 0.00374926 3.55457e+07 1.57771e+07 3.57475e+07 401 3.57653e+07 2.70297e+07 0.00375651 3.57226e+07 49.9701 0.00464514 0.996254 0 50.1415 GTEX-1HR98-0326-SM-CGQEL 2 C1 1 piece; 10% fibrous content 6.5 Thyroid Thyroid 0002046 1377 1049 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.988901 557174 0.967339 0.990623 0.79831 27446 1 76 0.00382132 487 0 1.76806e+08 0.0323273 963692 1.7848e+08 1.2877e+07 27503 8.80146e+07 0 0.169029 0.990623 0.790824 1.76806e+08 0.00394551 3.85946e+07 2.07705e+07 3.87689e+07 428 3.87451e+07 3.06003e+07 0.00388001 3.88587e+07 50.0732 0.00539945 0.992345 0 50.1127 GTEX-1HR98-0426-SM-COH36 1 C1 2 pieces; 90% fat, 10% fibrous; no mammary ducts 6.8 Breast Breast - Mammary Tissue 0008367 1380 1049 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990016 275655 0.975059 0.991347 0.803264 22632 1 76 0.00377468 131 0 6.23285e+07 0.0246389 610074 6.28726e+07 6.42746e+06 22652 3.10426e+07 0 0.171796 0.991347 0.796313 6.23285e+07 0.00456747 1.37567e+07 6.51252e+06 1.38656e+07 143 1.38806e+07 9.93606e+06 0.00417054 1.38228e+07 49.8956 0.00970334 0.992677 0 50.197 GTEX-1HR98-0526-SM-COH37 1 C1 2 pieces; <5% fat content 7 Nerve Nerve - Tibial 0001323 1381 1048 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991857 241019 0.962602 0.993028 0.714597 24451 1 76 0.00380713 137 0 6.77328e+07 0.037139 339137 6.82084e+07 7.13469e+06 24499 3.37262e+07 0 0.248005 0.993028 0.709615 6.77328e+07 0.0043606 1.48334e+07 6.48276e+06 1.48908e+07 146 1.48782e+07 9.23083e+06 0.00408354 1.49227e+07 50.0746 0.00497207 0.994199 0 50.0967 GTEX-1HR98-0626-SM-CL546 1 C1 2 pieces; well trimmed; fibrous plaques 5.7 Blood Vessel Artery - Tibial 0007610 1382 1048 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990566 300982 0.96238 0.992188 0.741476 24094 1 76 0.00300329 212 0 9.72097e+07 0.0373398 1.08804e+06 9.79751e+07 1.25847e+07 24134 4.83577e+07 0 0.220905 0.992188 0.735684 9.72097e+07 0.00437935 2.09773e+07 1.04339e+07 2.12245e+07 227 2.12304e+07 1.32291e+07 0.00369019 2.11167e+07 49.8658 0.0111052 0.99381 0 50.2929 GTEX-1HR98-1026-SM-CKZOM 1 C1 2 pieces; 50% & 20% fibrofatty content 6.7 Heart Heart - Atrial Appendage 0006631 1410 1022 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.988822 399343 0.975445 0.991357 0.812217 23135 1 76 0.00244495 188 0 8.01434e+07 0.0243532 3.58262e+06 8.08421e+07 7.5304e+06 23160 3.98707e+07 0 0.163228 0.991357 0.805197 8.01434e+07 0.00405117 1.75263e+07 9.98562e+06 1.78898e+07 217 1.79934e+07 9.54309e+06 0.00324601 1.7603e+07 49.4515 0.0443163 0.993892 0 50.5131 GTEX-1HR98-2226-SM-ADEI2 1 C1 6 pieces; well trimmed;dermal fat <5% 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1421 1017 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981112 286348 0.978105 0.987808 0.791951 22576 1 76 0.00361037 142 0 6.94608e+07 0.0215833 749401 7.03181e+07 7.64164e+06 22606 3.43939e+07 0 0.186154 0.987808 0.782296 6.94608e+07 0.00386892 1.51979e+07 8.35007e+06 1.54351e+07 150 1.56126e+07 1.17289e+07 0.00373877 1.54411e+07 49.7239 0.0106573 0.994504 0 50.3872 GTEX-1HR98-3026-SM-CNPPK 1 C1 4 pieces 6.4 Brain Brain - Cortex 0001870 1430 1012 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985722 409440 0.96257 0.988582 0.81818 25797 1 76 0.00619831 271 0 1.08135e+08 0.0371373 6.676e+06 1.09384e+08 2.91156e+07 25823 5.37707e+07 0 0.14439 0.988582 0.808838 1.08135e+08 0.00840579 2.33739e+07 2.03508e+07 2.41729e+07 315 2.41373e+07 1.16573e+07 0.00729885 2.36751e+07 49.5166 0.0610326 0.991442 0 50.8402 GTEX-1HR98-3126-SM-CNNQ9 1 C1 1 piece; neurohypophysis comprises 20% (circled) 6.3 Pituitary Pituitary 0000007 1430 1013 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989995 301316 0.956635 0.992525 0.75337 25797 1 76 0.00240659 172 0 8.47811e+07 0.0430916 1.06517e+06 8.54196e+07 9.01888e+06 25839 4.21818e+07 0 0.203266 0.992525 0.747738 8.47811e+07 0.00426295 1.7871e+07 1.48521e+07 1.80517e+07 186 1.80896e+07 1.323e+07 0.0033324 1.80368e+07 49.9269 0.0124699 0.995055 0 50.2516 GTEX-1HR9M-0003-SM-DHP29 B1 Blood Whole Blood 0013756 679 BP-58353 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/24/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1HR9M-0005-SM-AHZ26 B1 8.3 Blood Whole Blood 0013756 679 BP-58459 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2014 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.958353 450806 0.981343 0.960391 0.804543 16508 1 76 0.0020725 111 0 9.86895e+07 0.017676 208721 1.0276e+08 4.21537e+06 16512 4.90847e+07 0 0.1768 0.960391 0.772676 9.86895e+07 0.00332729 2.33283e+07 1.67923e+08 2.34642e+07 149 2.34904e+07 2.81997e+07 0.00269856 2.35319e+07 50.0442 0.00203116 0.96243 0 50.1452 GTEX-1HR9M-0011-R10a-SM-CM2SU B1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 670 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993442 698593 0.965482 0.995125 0.853303 22924 1 76 0.00201505 371 0 1.01e+08 0.0342432 1.10647e+07 1.01495e+08 6.05154e+06 22941 5.03059e+07 0 0.112179 0.995125 0.849144 1.01e+08 0.00295675 2.21445e+07 2.4932e+07 2.25616e+07 385 2.23873e+07 8.44271e+06 0.00248511 2.24621e+07 50.0833 0.109017 0.996809 0 50.4665 GTEX-1HR9M-0011-R3b-SM-ARL7B B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 670 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 EXCLUDE 0.990773 811027 0.955676 0.991493 0.794542 21156 1 76 0.00188126 140 0 5.24929e+07 0.0440514 4.09851e+06 5.29432e+07 3.93992e+06 21172 2.60604e+07 0 0.161135 0.991493 0.787783 5.24929e+07 0.00248419 1.14153e+07 1.35604e+07 1.16125e+07 149 1.16793e+07 5.80685e+06 0.0021825 1.13827e+07 49.357 0.0774133 0.992213 0 50.4282 GTEX-1HR9M-0011-R5a-SM-ARU72 B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 670 BP-66994 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992968 676260 0.962503 0.994274 0.818886 21176 1 76 0.00209444 265 0 8.93295e+07 0.0373637 1.19904e+07 8.9844e+07 2.86946e+06 21187 4.45326e+07 0 0.143617 0.994274 0.814197 8.93295e+07 0.00267967 1.88548e+07 4.60984e+07 1.97142e+07 323 1.92998e+07 5.00147e+06 0.00238667 1.93419e+07 50.0544 0.133458 0.995581 0 51.1141 GTEX-1HR9M-0011-R6a-SM-ARU6Z B1, A1 6.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 670 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990465 498547 0.960421 0.991851 0.836336 22807 1 76 0.00217948 266 0 7.8763e+07 0.0393956 7.79448e+06 7.94101e+07 2.53614e+06 22822 3.9236e+07 0 0.124086 0.991851 0.829521 7.8763e+07 0.00269943 1.70699e+07 1.60554e+07 1.75359e+07 295 1.73425e+07 6.7458e+06 0.00243909 1.73489e+07 50.0092 0.0981549 0.993237 0 50.6734 GTEX-1HR9M-0226-SM-COH3E 1 B1 2 pieces: 1 with 60% fibrous content & a focus of sweat glands [labeled] 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 738 720 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992808 282588 0.97589 0.994009 0.807578 23702 1 76 0.00355308 178 0 8.50286e+07 0.023757 379289 8.55411e+07 9.24083e+06 23721 4.23678e+07 0 0.168312 0.994009 0.80274 8.50286e+07 0.00408363 1.86901e+07 7.94377e+06 1.88271e+07 192 1.88286e+07 1.61318e+07 0.00381804 1.87897e+07 49.9482 0.004434 0.99521 0 50.1826 GTEX-1HR9M-0326-SM-CL549 1 B1 2 pieces; fat content <5% 8 Muscle Muscle - Skeletal 0011907 742 716 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99282 694994 0.982091 0.994476 0.863062 21982 1 76 0.00240819 380 0 1.28087e+08 0.0175679 1.39593e+06 1.28798e+08 1.74835e+07 22005 6.37804e+07 0 0.119029 0.994476 0.858294 1.28087e+08 0.00340833 2.76393e+07 1.46239e+07 2.81012e+07 354 2.81755e+07 2.74021e+07 0.00290742 2.77496e+07 49.6192 0.0108381 0.996131 0 50.4143 GTEX-1HR9M-0426-SM-CMKGM 1 B1 2 pieces; 10% internal fat content; well trimmed 7.1 Nerve Nerve - Tibial 0001323 752 706 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993589 263490 0.965774 0.994685 0.736448 24442 1 76 0.0021783 184 0 8.54975e+07 0.0338887 475080 8.59544e+07 6.34515e+06 24481 4.25932e+07 0 0.229327 0.994685 0.732533 8.54975e+07 0.00319582 1.88119e+07 7.94176e+06 1.88952e+07 195 1.89069e+07 1.32468e+07 0.0026865 1.88949e+07 49.9841 0.00552712 0.99578 0 50.1105 GTEX-1HR9M-0526-SM-ACKVP 1 B1 2 pieces; minimal intimal thickening; calcific foci in 1 piece; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 759 699 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991219 235746 0.970724 0.993078 0.786838 22732 1 76 0.00283209 280 0 9.32913e+07 0.0288728 600829 9.39416e+07 1.27876e+07 22763 4.64309e+07 0 0.183886 0.993078 0.781392 9.32913e+07 0.00370952 2.02098e+07 7.94701e+06 2.03796e+07 256 2.04305e+07 1.60284e+07 0.00326998 2.03194e+07 49.8637 0.00639577 0.994937 0 50.2091 GTEX-1HR9M-0626-SM-A96S6 1 B1 2 pieces; 10% internal fat content 6.4 Thyroid Thyroid 0002046 791 667 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992342 251378 0.962644 0.993552 0.743352 23635 1 76 0.00216977 122 0 6.15934e+07 0.0370338 244419 6.19931e+07 2.1719e+06 23659 3.06871e+07 0 0.219292 0.993552 0.738559 6.15934e+07 0.0024117 1.34219e+07 5.67979e+06 1.34945e+07 132 1.35157e+07 1.03285e+07 0.00229059 1.34701e+07 49.9155 0.00394268 0.994763 0 50.1348 GTEX-1HR9M-1426-SM-A9SMB 1 B1 2 pieces; minimal fibrous content 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 819 639 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988813 194371 0.971373 0.990548 0.759967 21690 1 76 0.00656368 111 0 4.57056e+07 0.0283571 378018 4.61417e+07 8.07971e+06 21704 2.27417e+07 0 0.211406 0.990548 0.752783 4.57056e+07 0.00836356 1.00073e+07 6.33303e+06 1.00844e+07 113 1.00921e+07 7.17932e+06 0.00746204 1.00785e+07 49.9662 0.00819254 0.992282 0 50.1918 GTEX-1HR9M-2226-SM-CNPPY 1 B1 6 pieces; thick collagen bands in deep dermis; virtually no dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 861 597 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98417 387645 0.97068 0.987396 0.74358 24401 1 76 0.00575993 184 0 9.80454e+07 0.0290698 634325 9.92969e+07 2.51912e+07 24451 4.87239e+07 0 0.227099 0.987396 0.734208 9.80454e+07 0.00853339 2.14429e+07 1.39314e+07 2.16256e+07 193 2.17407e+07 1.53276e+07 0.00714213 2.16297e+07 49.872 0.00638817 0.990623 0 50.2121 GTEX-1HR9M-2326-SM-CNPPZ 2 B1 6 pieces; mucosa largely autolyzed; muscle intact without fibrosis 6 Stomach Stomach 0000945 861 597 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983226 233524 0.970893 0.986649 0.81392 23289 1 76 0.00566707 142 0 7.39273e+07 0.0288775 1.69664e+06 7.49277e+07 1.91012e+07 23303 3.6725e+07 0 0.156973 0.986649 0.803053 7.39273e+07 0.00907346 1.60186e+07 8.81791e+06 1.61877e+07 160 1.62406e+07 1.14168e+07 0.00736436 1.62044e+07 49.9442 0.0226437 0.990071 0 50.2625 GTEX-1HR9M-2426-SM-ACKXI 1 B1 2 pieces of fibrofatty tissue without mammary ducts 6 Breast Breast - Mammary Tissue 0008367 868 590 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992457 360185 0.971917 0.993812 0.747963 25624 1 76 0.00282435 278 0 1.08152e+08 0.0277806 599408 1.08825e+08 1.38352e+07 25679 5.38659e+07 0 0.223954 0.993812 0.743334 1.08152e+08 0.00369085 2.37389e+07 1.23778e+07 2.39089e+07 273 2.39644e+07 1.74736e+07 0.00325701 2.38223e+07 49.8512 0.00550798 0.995167 0 50.1784 GTEX-1HR9M-2526-SM-A9G3J 1 B1 3 pieces; 1 robust gland, 2 atrophic with fibrofatty stroma & nerves 6.9 Salivary Gland Minor Salivary Gland 0006330 872 586 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985343 242492 0.966402 0.990504 0.74702 24955 1 76 0.00396844 216 0 8.71789e+07 0.0332964 354784 8.80147e+07 8.42379e+06 24999 4.32682e+07 0 0.219382 0.990504 0.739927 8.71789e+07 0.00403581 1.91061e+07 1.04422e+07 1.93729e+07 205 1.9537e+07 1.26718e+07 0.00400151 1.93519e+07 49.762 0.00403096 0.995665 0 50.3466 GTEX-1HR9M-2926-SM-ACKVO 1 B1 1 piece; adenohypophysis, no neural component 7.3 Pituitary Pituitary 0000007 990 468 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991689 273213 0.964115 0.993469 0.779241 24921 1 76 0.00284697 269 0 9.03416e+07 0.0356234 3.27292e+06 9.09355e+07 1.17258e+07 24961 4.49875e+07 0 0.184874 0.993469 0.774152 9.03416e+07 0.00367224 1.97633e+07 1.1127e+07 2.00264e+07 266 2.00321e+07 1.20137e+07 0.00325886 1.99093e+07 49.8462 0.0359917 0.99525 0 50.3306 GTEX-1HSEH-0008-SM-DMZ2H B1 Skin Cells - Cultured fibroblasts EFO_0002009 285 BP-75656 RNA isolation_Trizol Manual (Cell Pellet) 06/13/2016 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSEH-0126-SM-ACKXN 0 B1 6 pieces, adherent dermal fat up to ~0.7mm, rep delineated; squamous epithelium is ~50-60 microns 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 264 1189 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.990996 225861 0.971176 0.992778 0.781655 23955 1 76 0.00294261 278 0 8.8389e+07 0.0286509 1.6868e+06 8.9032e+07 1.22011e+07 23989 4.40131e+07 0 0.189522 0.992778 0.776009 8.8389e+07 0.00409545 1.93563e+07 1.13442e+07 1.96816e+07 265 1.96214e+07 1.11584e+07 0.003518 1.95594e+07 49.9208 0.018946 0.994559 0 50.4167 GTEX-1HSEH-0226-SM-ACKVV 0 B1 2 pieces, fascia/vascular elements up to ~40% of tissue, rep delineated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 271 1182 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993515 319654 0.977201 0.994737 0.819355 24157 1 76 0.00277556 282 0 1.23749e+08 0.0224468 828434 1.24404e+08 1.59944e+07 24196 6.16613e+07 0 0.157845 0.994737 0.815043 1.23749e+08 0.00335889 2.71992e+07 1.19645e+07 2.74537e+07 325 2.74545e+07 2.19035e+07 0.00306687 2.73435e+07 49.8987 0.00665923 0.995959 0 50.2328 GTEX-1HSEH-0326-SM-A9G26 0 B1 2 pieces, interstitial fat/vascular elements, ~10-15% of tissue, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 275 1178 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986279 254063 0.982105 0.991881 0.876112 19930 1 76 0.0035208 274 0 9.64391e+07 0.017653 2.00244e+06 9.72285e+07 8.34624e+06 19937 4.78753e+07 0 0.105993 0.991881 0.868999 9.64391e+07 0.00385547 2.09286e+07 1.24654e+07 2.11861e+07 265 2.13163e+07 1.85031e+07 0.003685 2.12613e+07 49.9354 0.0205952 0.997483 0 50.3056 GTEX-1HSEH-0426-SM-ACKVW 0 B1 2 pieces, trace rim of adherent fibradipose tissue up to ~0.5mm 8 Blood Vessel Artery - Tibial 0007610 282 1171 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992354 316028 0.973154 0.993994 0.827287 22248 1 76 0.00271807 283 0 1.18183e+08 0.0264247 587954 1.18897e+08 1.58902e+07 22279 5.88518e+07 0 0.145867 0.993994 0.822318 1.18183e+08 0.00338755 2.53296e+07 8.47176e+06 2.55346e+07 299 2.55566e+07 2.18161e+07 0.00305225 2.54875e+07 49.9323 0.00494507 0.995633 0 50.2015 GTEX-1HSEH-0526-SM-ADEJ1 0 B1 2 pieces, no adherent fat 7 Nerve Nerve - Tibial 0001323 284 1169 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981898 458506 0.966163 0.98857 0.722919 24252 1 76 0.00342185 187 0 9.12767e+07 0.0335526 427660 9.2332e+07 9.74868e+06 24306 4.51996e+07 0 0.243244 0.98857 0.714656 9.12767e+07 0.00378147 1.994e+07 8.51302e+06 2.01117e+07 201 2.0357e+07 1.33865e+07 0.00360045 2.02419e+07 49.8582 0.00463176 0.995242 0 50.2144 GTEX-1HSEH-0626-SM-A8NA1 2 B1 2 pieces, hyperplastic glandular pattern; glandular epithelium with moderate-advanced autolysis. 5.9 Prostate Prostate 0002367 399 1054 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983657 249795 0.961962 0.986755 0.744202 24543 1 76 0.0109932 120 0 6.07694e+07 0.037856 1.07853e+06 6.15851e+07 1.10228e+07 24573 3.01636e+07 0 0.21776 0.986755 0.734345 6.07694e+07 0.0117241 1.32713e+07 8.89971e+06 1.3581e+07 124 1.36189e+07 7.39963e+06 0.0113575 1.3419e+07 49.6303 0.0175128 0.989853 0 50.5766 GTEX-1HSEH-0726-SM-B2LXD 2 B1 2 pieces, spermatogenesis is present but appears reduced 6 Testis Testis 0000473 406 1047 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989742 786423 0.921066 0.991579 0.695693 33141 1 76 0.00248438 162 0 8.29143e+07 0.0786272 944797 8.36185e+07 3.41282e+06 33210 4.12477e+07 0 0.225373 0.991579 0.689835 8.29143e+07 0.00373189 1.71258e+07 1.07037e+07 1.71981e+07 163 1.73151e+07 1.24168e+07 0.00310698 1.71365e+07 49.7408 0.0112989 0.993416 0 50.1053 GTEX-1HSEH-0826-SM-B2LXE 1 B1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 412 1041 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990975 480456 0.964842 0.992792 0.734284 27564 1 76 0.00246748 154 0 7.74924e+07 0.034894 317901 7.8055e+07 3.58074e+06 27608 3.85556e+07 0 0.230558 0.992792 0.728991 7.74924e+07 0.0039829 1.69431e+07 6.9101e+06 1.70319e+07 170 1.70904e+07 1.13558e+07 0.0032238 1.70176e+07 49.8933 0.00407278 0.994608 0 50.1307 GTEX-1HSEH-1226-SM-A96TX 1 B1 6 pieces, confirmed target muscularis, adherent tags of fibroadipose tissue up to ~1mm 7 Esophagus Esophagus - Muscularis 0004648 430 1023 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 EXCLUDE 0.992141 205550 0.970537 0.993499 0.770614 23757 1 76 0.00213307 165 0 6.9136e+07 0.0289207 917494 6.95884e+07 2.34548e+06 23791 3.44475e+07 0 0.199922 0.993499 0.765605 6.9136e+07 0.00256013 1.53336e+07 8.04745e+06 1.5457e+07 167 1.54305e+07 1.01338e+07 0.0023463 1.54424e+07 50.0193 0.0131846 0.994858 0 50.2002 GTEX-1HSEH-1326-SM-ADEI1 1 B1 2 pieces, trace fascia/vascular elements 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 435 1018 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982175 437478 0.974737 0.988608 0.84 23329 1 76 0.00337431 277 0 1.06349e+08 0.0250035 775094 1.07575e+08 1.18632e+07 23360 5.27122e+07 0 0.134737 0.988608 0.830431 1.06349e+08 0.00309621 2.3e+07 1.25379e+07 2.35461e+07 313 2.37391e+07 1.74829e+07 0.00323616 2.34068e+07 49.6476 0.00720516 0.99504 0 50.5866 GTEX-1HSEH-1426-SM-B2LXF 1 B1 6 pieces, confirmed target muscularis; focal adherent fibroadipose tisssue, ~1mm 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 436 1017 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991247 476411 0.973322 0.99318 0.794225 21191 1 76 0.00243605 123 0 5.24199e+07 0.0264143 354160 5.27799e+07 2.24999e+06 21206 2.60781e+07 0 0.179097 0.99318 0.788808 5.24199e+07 0.00367035 1.1434e+07 4.23342e+06 1.1538e+07 125 1.15658e+07 8.61773e+06 0.003052 1.14985e+07 49.854 0.00671014 0.995112 0 50.2264 GTEX-1HSEH-1526-SM-B2LXG 2 B1 6 pieces; target mucosa up to ~0.7mm, moderately advanced autolysis, ~20-30% of thickness 5.6 Stomach Stomach 0000945 441 1012 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989698 553052 0.976204 0.992055 0.818464 23277 1 76 0.00246763 223 0 7.76456e+07 0.0235456 1.56294e+06 7.82675e+07 3.51282e+06 23297 3.85973e+07 0 0.15774 0.992055 0.811961 7.76456e+07 0.00407779 1.72759e+07 1.81066e+07 1.75145e+07 219 1.75051e+07 1.15737e+07 0.00327079 1.74509e+07 49.9225 0.0199692 0.994411 0 50.3429 GTEX-1HSEH-1726-SM-B2LXH 1 B1 6 pieces, mucosa up to ~0.3mm, 10-20% thickness 6.4 Colon Colon - Transverse 0001157 465 988 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990889 510715 0.97154 0.992867 0.800252 23509 1 76 0.00256919 200 0 8.04912e+07 0.0279039 1.40194e+06 8.10695e+07 3.42213e+06 23542 4.00376e+07 0 0.171288 0.992867 0.794544 8.04912e+07 0.00382411 1.784e+07 9.38092e+06 1.80267e+07 213 1.8077e+07 1.11641e+07 0.0031954 1.79278e+07 49.7928 0.017293 0.994845 0 50.2602 GTEX-1HSEH-1826-SM-A96SA 1 B1 2 pieces, glandular elements are ~70% of tissue (delineated), rest is fibroconnective, skeletal muscle, squamous epithelium 7.4 Salivary Gland Minor Salivary Gland 0006330 460 993 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992189 319918 0.969761 0.993664 0.760349 24876 1 76 0.00207766 289 0 9.34537e+07 0.0297089 490379 9.40497e+07 2.95411e+06 24923 4.65525e+07 0 0.209413 0.993664 0.755531 9.34537e+07 0.00264307 2.08744e+07 1.3392e+07 2.10337e+07 267 2.10686e+07 1.44267e+07 0.00235995 2.09709e+07 49.8837 0.00521404 0.995138 0 50.1901 GTEX-1HSEH-1926-SM-A96SB 1 B1 6 pieces, target muscularis; trace adherent fat, trace autolyzed mucosa (delineated) 6.6 Colon Colon - Sigmoid 0001159 462 991 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991853 1.83736e+06 0.891524 0.993255 0.70272 21959 1 76 0.00196188 164 0 7.78087e+07 0.108191 525731 7.83371e+07 2.76182e+06 21986 3.87729e+07 0 0.188804 0.993255 0.69798 7.78087e+07 0.00220267 1.53949e+07 7.39512e+07 1.5867e+07 169 1.58738e+07 1.0658e+07 0.00208211 1.5521e+07 49.438 0.00671114 0.994657 0 50.7551 GTEX-1HSEH-2026-SM-ADEHN 0 B1 2 pieces, fibroadipose tissues only, no ductal elements 6.7 Breast Breast - Mammary Tissue 0008367 462 991 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982526 428045 0.974585 0.988966 0.827248 22196 1 76 0.00338656 275 0 9.43899e+07 0.0251503 946494 9.5443e+07 1.0059e+07 22220 4.67744e+07 0 0.147338 0.988966 0.818119 9.43899e+07 0.00327818 2.04136e+07 1.1445e+07 2.09179e+07 278 2.11095e+07 1.42833e+07 0.00333272 2.0753e+07 49.5743 0.00991685 0.995405 0 50.61 GTEX-1HSGN-0001-SM-G8OXV B1 Blood Whole Blood 0013756 -53 BP-58457 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/26/2014 LCSET-11677,LCSET-11865 09/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSGN-0003-SM-EZ6M3 B1 9.5 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -53 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.992188 765024 0.971286 0.993598 0.841629 22222 1 76 0.00261137 290 0 1.27385e+08 0.0280058 648615 1.28206e+08 9.02508e+06 22262 6.34696e+07 0 0.129657 0.993598 0.836241 1.27385e+08 0.00364301 2.84067e+07 1.76772e+07 2.85154e+07 313 2.85732e+07 3.17039e+07 0.00312646 2.85183e+07 49.952 0.00505916 0.995008 0 50.0955 GTEX-1HSGN-0006-SM-ACKVH B1 8 Blood Whole Blood 0013756 -53 BP-58459 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2014 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.987361 604580 0.961449 0.989224 0.810632 18455 1 76 0.00314619 129 0 8.03036e+07 0.0380443 230539 8.11784e+07 1.15301e+07 18465 3.99767e+07 0 0.150818 0.989224 0.801896 8.03036e+07 0.00450361 1.79608e+07 7.80401e+07 1.81816e+07 145 1.82258e+07 1.87043e+07 0.00382362 1.80727e+07 49.7891 0.00283991 0.991087 0 50.3054 GTEX-1HSGN-0126-SM-CGQFU 0 B1 2 pieces, ~5-10% non adipose elements, peripheral nerve, vascular elements (rep delineated) 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 316 616 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99286 722769 0.976524 0.994547 0.817812 25483 1 76 0.00379632 488 0 1.68287e+08 0.0231824 644238 1.6921e+08 1.21195e+07 25531 8.38491e+07 0 0.158712 0.994547 0.813352 1.68287e+08 0.0037265 3.69926e+07 1.51441e+07 3.72036e+07 427 3.72179e+07 2.93737e+07 0.00376334 3.72034e+07 49.9902 0.00380733 0.996233 0 50.1422 GTEX-1HSGN-0226-SM-CGQFV 0 B1 6 pieces, squamous epithelium is ~30-40 microns; tags of adherent dermal fat up to ~0.3mm 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 318 614 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.989556 624716 0.972399 0.991188 0.809396 25472 1 76 0.00406293 547 0 1.51159e+08 0.0273481 837751 1.52503e+08 1.1629e+07 25516 7.52955e+07 0 0.163003 0.991188 0.802264 1.51159e+08 0.00384163 3.26409e+07 1.7938e+07 3.28514e+07 438 3.28417e+07 2.50466e+07 0.00395835 3.28541e+07 50.0094 0.00549334 0.99282 0 50.1606 GTEX-1HSGN-0326-SM-ACKXQ 0 B1 2 pieces, ~10% interstitial fat, rep delineated 8.3 Muscle Muscle - Skeletal 0011907 321 611 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.99414 318536 0.982555 0.995157 0.867418 21137 1 76 0.00276683 281 0 1.24048e+08 0.0172095 1.64745e+06 1.24652e+08 1.51292e+07 21153 6.18418e+07 0 0.115136 0.995157 0.863218 1.24048e+08 0.00330868 2.63936e+07 2.17331e+07 2.64681e+07 318 2.64752e+07 2.35047e+07 0.00303748 2.64991e+07 50.0226 0.0132164 0.996175 0 50.0705 GTEX-1HSGN-0426-SM-CGQFW 0 B1 2 pieces, minimal nubbin of adherent fat (~0.3mm) 6.6 Nerve Nerve - Tibial 0001323 323 609 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991172 587876 0.964377 0.992967 0.753128 27212 1 76 0.00385523 495 0 1.6877e+08 0.0353601 849683 1.69965e+08 1.25296e+07 27296 8.40302e+07 0 0.211249 0.992967 0.747832 1.6877e+08 0.00408612 3.6991e+07 1.5335e+07 3.72209e+07 436 3.71693e+07 2.37464e+07 0.00396431 3.72856e+07 50.0781 0.00499916 0.994763 0 50.1549 GTEX-1HSGN-0526-SM-ADEHQ 0 B1 2 pieces, no significant adherenat fat, or atherosis 7.5 Blood Vessel Artery - Tibial 0007610 325 607 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982759 316456 0.974988 0.989135 0.821706 20984 1 76 0.00335593 207 0 8.32147e+07 0.0246699 389847 8.41287e+07 9.13276e+06 21007 4.12323e+07 0 0.153282 0.989135 0.812778 8.32147e+07 0.0033338 1.77204e+07 5.88286e+06 1.79232e+07 205 1.8101e+07 1.57146e+07 0.00334494 1.80094e+07 49.8731 0.00463393 0.99551 0 50.2844 GTEX-1HSGN-0626-SM-A9G2E 0 B1 3 pieces, nearly pure glandular elements; excellent specimen 8.5 Salivary Gland Minor Salivary Gland 0006330 323 609 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983199 266550 0.968778 0.988393 0.77063 24950 1 76 0.00455796 194 0 8.36384e+07 0.0297964 274670 8.46205e+07 7.62595e+06 24992 4.14514e+07 0 0.198148 0.988393 0.761686 8.36384e+07 0.00478841 1.85449e+07 1.73446e+07 1.88397e+07 181 1.90256e+07 1.30416e+07 0.00467108 1.87611e+07 49.6501 0.0032459 0.993587 0 50.3943 GTEX-1HSGN-0726-SM-A9G2F 1 B1 2 pieces, ~10-15% adherent fat/vascular elements, rep delineated 8.7 Thyroid Thyroid 0002046 335 597 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987764 225796 0.971385 0.9916 0.782142 23943 1 76 0.00404895 165 0 8.36019e+07 0.0283146 274096 8.43101e+07 7.62946e+06 23969 4.15554e+07 0 0.189243 0.9916 0.775572 8.36019e+07 0.00371536 1.83043e+07 8.10129e+06 1.85818e+07 170 1.86854e+07 1.53166e+07 0.00388498 1.84842e+07 49.7294 0.00325105 0.995437 0 50.3762 GTEX-1HSGN-0826-SM-ACKW3 0 B1 2 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 333 599 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992599 287325 0.963201 0.994158 0.748026 24754 1 76 0.00305385 289 0 1.01424e+08 0.0366212 897500 1.0202e+08 1.40661e+07 24797 5.05335e+07 0 0.215176 0.994158 0.743655 1.01424e+08 0.00376904 2.19917e+07 1.59024e+07 2.22014e+07 266 2.21812e+07 1.41562e+07 0.00341089 2.21559e+07 49.9714 0.00879729 0.995716 0 50.2373 GTEX-1HSGN-0926-SM-CNNQM 1 B1 2 pieces, no abnormalities 7.9 Heart Heart - Atrial Appendage 0006631 337 595 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992768 267253 0.981779 0.994798 0.849041 22493 1 76 0.00271689 269 0 1.28902e+08 0.0179992 2.36543e+06 1.29576e+08 1.38322e+07 22513 6.42207e+07 0 0.132738 0.994798 0.844624 1.28902e+08 0.00370397 2.7638e+07 2.74978e+07 2.81553e+07 325 2.80999e+07 1.88194e+07 0.00320943 2.79004e+07 49.8219 0.0182551 0.996827 0 50.4636 GTEX-1HSGN-1026-SM-CNPQ1 1 B1 2 pieces, adherent nubbins of faxica/fat, rep delineated; not significant atherosis 7.5 Blood Vessel Artery - Aorta 0001496 339 593 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983185 193291 0.976264 0.98645 0.847152 21202 1 76 0.00550371 120 0 5.69793e+07 0.0232913 142485 5.7762e+07 1.39452e+07 21215 2.83162e+07 0 0.129112 0.98645 0.835673 5.69793e+07 0.00884396 1.22865e+07 4.62953e+06 1.2334e+07 122 1.23873e+07 1.10509e+07 0.0071683 1.24106e+07 50.0469 0.00246676 0.989715 0 50.0965 GTEX-1HSGN-1126-SM-CJI4G 1 B1 2 pieces, mild interstitial fibrosis; ~10% epicardial fat; rep delineated. 8.3 Heart Heart - Left Ventricle 0006566 342 590 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991267 735185 0.985301 0.992322 0.846982 21573 1 76 0.00234669 373 0 1.28627e+08 0.0145001 2.73407e+06 1.29622e+08 7.32862e+06 21595 6.40737e+07 0 0.138319 0.992322 0.840479 1.28627e+08 0.00269021 2.76123e+07 4.14019e+07 2.82966e+07 349 2.81843e+07 1.96865e+07 0.00251827 2.783e+07 49.6837 0.0210927 0.993376 0 50.612 GTEX-1HSGN-1226-SM-CGQFT 1 B1 2 pieces, probalbe branch twigs, >60% of tissue is epicardial fat; insufficient target artery 7 Blood Vessel Artery - Coronary 0001621 347 585 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992709 715633 0.973042 0.994331 0.816399 25748 1 76 0.003744 524 0 1.68015e+08 0.026663 874801 1.68973e+08 1.12305e+07 25799 8.36905e+07 0 0.156643 0.994331 0.811771 1.68015e+08 0.00383167 3.63903e+07 1.31003e+07 3.66142e+07 442 3.65278e+07 2.73036e+07 0.00378542 3.66866e+07 50.1084 0.00517715 0.995952 0 50.1534 GTEX-1HSGN-1426-SM-A8NAA 1 B1 "2 pieces, variable saponification; ~70% ""score 1""; rest score 2 (encircled). Numerous well -preserved Islets, rep delineated." 8.2 Pancreas Pancreas 0001150 352 580 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.990608 384402 0.978465 0.992195 0.842763 23340 1 76 0.00667923 131 0 1.17903e+08 0.0210568 252749 1.1883e+08 1.69902e+07 23366 5.86836e+07 0 0.135702 0.992195 0.836185 1.17903e+08 0.00693148 2.70639e+07 3.53597e+07 2.72891e+07 163 2.72167e+07 3.57025e+07 0.00680515 2.73315e+07 50.1052 0.00212698 0.993782 0 50.2071 GTEX-1HSGN-1526-SM-A9SMO 1 B1 2 pieces; mainly fibroadipose elements; few TDLUs, rep delineated. 7.8 Breast Breast - Mammary Tissue 0008367 355 577 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8171 11/17/2015 TruSeq.v1 RNASEQ 0.986174 553757 0.965036 0.990293 0.729919 26524 1 76 0.0034142 283 0 1.10564e+08 0.0343191 334902 1.11648e+08 9.70759e+06 26582 5.48876e+07 0 0.235117 0.990293 0.722834 1.10564e+08 0.00423959 2.41942e+07 1.10573e+07 2.43167e+07 268 2.45099e+07 1.81882e+07 0.00382518 2.44159e+07 49.9039 0.00299962 0.994413 0 50.1263 GTEX-1HSGN-1626-SM-A96U2 1 B1 6 pieces, squamous mucosa up to ~0.3mm, ~10-15% thickness. Submucosal mucuis glands present; rep. delineated 8.8 Esophagus Esophagus - Mucosa 0006920 363 569 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991183 200892 0.971988 0.992298 0.796237 24032 1 76 0.00226279 217 0 8.08328e+07 0.0274331 333693 8.14602e+07 2.60263e+06 24056 4.02816e+07 0 0.175751 0.992298 0.790104 8.08328e+07 0.00252836 1.80526e+07 1.06372e+07 1.82126e+07 203 1.82037e+07 1.51706e+07 0.00239543 1.81456e+07 49.92 0.00409639 0.993414 0 50.2206 GTEX-1HSGN-1726-SM-B2LXX 1 B1 6 pieces, confirmed target muscularis 7 Esophagus Esophagus - Muscularis 0004648 366 566 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991974 466011 0.972709 0.993571 0.79285 22375 1 76 0.00243507 161 0 7.4876e+07 0.0270396 582787 7.53605e+07 2.77975e+06 22402 3.72644e+07 0 0.179859 0.993571 0.787753 7.4876e+07 0.00385083 1.61235e+07 6.10468e+06 1.62707e+07 175 1.62462e+07 1.18037e+07 0.00314181 1.62552e+07 50.0139 0.00773332 0.995168 0 50.2273 GTEX-1HSGN-1826-SM-CL54H 1 B1 6 pieces, confirmed target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 372 560 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991651 584417 0.973849 0.993263 0.801695 23447 1 76 0.00290717 180 0 8.58468e+07 0.0256038 500568 8.64291e+07 1.09436e+07 23484 4.27118e+07 0 0.172154 0.993263 0.796294 8.58468e+07 0.00396684 1.86112e+07 7.62862e+06 1.87654e+07 195 1.87895e+07 1.46103e+07 0.00343615 1.87184e+07 49.9053 0.00579166 0.994875 0 50.2063 GTEX-1HSGN-1926-SM-CMKGS 1 B1 2 pieces, ~5% vascular elements, rep delineated 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 373 559 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995565 431971 0.978109 0.996389 0.821816 23829 1 76 0.00214924 377 0 1.16698e+08 0.0215881 590648 1.17121e+08 7.94671e+06 23860 5.81933e+07 0 0.156293 0.996389 0.818849 1.16698e+08 0.00287738 2.57406e+07 1.12172e+07 2.59918e+07 349 2.60061e+07 2.03873e+07 0.00251301 2.58151e+07 49.8156 0.00504307 0.997214 0 50.2428 GTEX-1HSGN-2026-SM-A8N7S 1 B1 6 pieces, ~80% mucosa, chronic gastritis; rep. lymphoid aggregates delineated 6.7 Stomach Stomach 0000945 376 556 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985169 304713 0.967486 0.98756 0.745878 26358 1 76 0.0108948 241 0 1.11722e+08 0.0321136 1.96127e+06 1.13129e+08 1.89028e+07 26413 5.55232e+07 0 0.221608 0.98756 0.736599 1.11722e+08 0.011231 2.46342e+07 3.50747e+07 2.49794e+07 250 2.50838e+07 1.61867e+07 0.0110625 2.47787e+07 49.694 0.0173366 0.989951 0 50.3479 GTEX-1HSGN-2126-SM-A8N8G 1 B1 6 pieces, abundant lymphoid aggregates,, 40-50% of tissue rep dlineated 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 386 546 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.982741 303516 0.956179 0.985189 0.709961 27234 1 76 0.0115457 161 0 9.74384e+07 0.0426353 466225 9.89033e+07 1.78642e+07 27288 4.83518e+07 0 0.246218 0.985189 0.699446 9.74384e+07 0.011344 2.11254e+07 1.60424e+07 2.14044e+07 168 2.14854e+07 1.32105e+07 0.0114451 2.12726e+07 49.7511 0.00471395 0.987638 0 50.328 GTEX-1HSGN-2226-SM-A9SL6 1 B1 6 pieces, confirmed target muscularis, few trace nubbins of adherent fat 7.5 Colon Colon - Sigmoid 0001159 396 536 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989839 356989 0.971595 0.991517 0.792478 23854 1 76 0.00647144 208 0 9.70289e+07 0.0281541 717214 9.7859e+07 1.67131e+07 23886 4.83084e+07 0 0.179117 0.991517 0.785756 9.70289e+07 0.00820741 2.08925e+07 1.00437e+07 2.11192e+07 212 2.11158e+07 1.48531e+07 0.00733796 2.10419e+07 49.9123 0.00732906 0.993196 0 50.2698 GTEX-1HSGN-2326-SM-A9G1D 1 B1 2 pieces, myometrium, no abnormalities 7.9 Uterus Uterus 0000995 390 542 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988233 229287 0.971969 0.99232 0.793753 23613 1 76 0.00387323 214 0 9.5889e+07 0.0276804 242048 9.66311e+07 8.57786e+06 23644 4.76414e+07 0 0.178216 0.99232 0.787657 9.5889e+07 0.00396503 2.06976e+07 8.05260e+06 2.10247e+07 241 2.11264e+07 1.69575e+07 0.00391835 2.09463e+07 49.786 0.00250487 0.996407 0 50.392 GTEX-1HSGN-2426-SM-C1YRI 1 B1 2 pieces, typical post menopausal atrophy 8.2 Ovary Ovary 0000992 393 539 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990215 792851 0.967413 0.9929 0.732891 24248 1 76 0.00196725 206 0 9.68883e+07 0.0322813 116895 9.75812e+07 4.41575e+06 24302 4.81737e+07 0 0.234522 0.9929 0.727687 9.68883e+07 0.00252638 2.12471e+07 9.83134e+06 2.13495e+07 209 2.14394e+07 1.71305e+07 0.00224606 2.13982e+07 49.9519 0.00119793 0.995585 0 50.1203 GTEX-1HSGN-2626-SM-CE6S1 1 B1 6 pieces, mucosa up to ~0.4mm, partially sloughed 7.3 Colon Colon - Transverse 0001157 403 529 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98835 362969 0.971263 0.989757 0.784078 24198 1 76 0.00828679 133 0 6.6069e+07 0.0281554 770899 6.67527e+07 1.09581e+07 24225 3.2853e+07 0 0.187184 0.989757 0.776047 6.6069e+07 0.00773236 1.45142e+07 8.03892e+06 1.45866e+07 132 1.46545e+07 9.58604e+06 0.00800997 1.4531e+07 49.7884 0.0115486 0.991165 0 50.1243 GTEX-1HSGN-5007-SM-AN47A B1 Heart Heart - Left Ventricle 0006566 343 ChIP-Seq GTEX-1HSKV-0001-SM-EZ6M6 B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 591 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990611 636212 0.973241 0.992362 0.831121 22375 1 76 0.00262156 283 0 1.32539e+08 0.0257751 507001 1.33559e+08 9.64354e+06 22415 6.59859e+07 0 0.14212 0.992362 0.824773 1.32539e+08 0.00400703 2.97263e+07 1.74483e+07 2.97993e+07 313 2.98967e+07 3.19442e+07 0.00331308 2.98452e+07 49.9569 0.00379608 0.994113 0 50.0614 GTEX-1HSKV-0003-SM-AG5ZV B1 Blood Whole Blood 0013756 591 BP-58457 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/26/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-1HSKV-0004-SM-DHP2F B1 Blood Whole Blood 0013756 591 BP-58457 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/26/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSKV-0006-SM-ARZL9 B1 8.4 Blood Whole Blood 0013756 591 BP-58459 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.955921 778362 0.96716 0.959125 0.784556 17154 1 76 0.00240337 86 0 6.21814e+07 0.0321304 132701 6.48313e+07 2.79172e+06 17161 3.06024e+07 0 0.182605 0.959125 0.752487 6.21814e+07 0.0041836 1.42458e+07 1.12922e+08 1.48007e+07 112 1.52826e+07 1.80959e+07 0.00329051 1.39888e+07 47.7901 0.00204687 0.96233 0 50.9552 GTEX-1HSKV-0011-R10b-SM-CMKH6 B1, A1 5.6 Brain Brain - Frontal Cortex (BA9) 0009834 594 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995033 883015 0.964731 0.996038 0.852125 23635 1 76 0.00179697 371 0 1.08415e+08 0.0349129 7.57502e+06 1.08846e+08 7.18737e+06 23656 5.40444e+07 0 0.112605 0.996038 0.84875 1.08415e+08 0.00245872 2.3489e+07 3.12729e+07 2.40624e+07 372 2.40476e+07 1.13992e+07 0.00212751 2.36008e+07 49.5311 0.0695939 0.997043 0 50.6029 GTEX-1HSKV-0011-R11b-SM-AHZ2E B1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 594 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987886 744816 0.950119 0.989469 0.771665 25547 1 76 0.00697797 272 0 1.30713e+08 0.0494747 1.97696e+06 1.32104e+08 2.43935e+07 25595 6.50196e+07 0 0.178454 0.989469 0.763538 1.30713e+08 0.00840304 2.81848e+07 2.27934e+07 2.84436e+07 322 2.84737e+07 1.64824e+07 0.00768937 2.83386e+07 49.8811 0.0149652 0.991052 0 50.2285 GTEX-1HSKV-0011-R1b-SM-CMKH7 B1, A1 8.6 Brain Brain - Hippocampus 0001954 594 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994971 797113 0.962352 0.995986 0.847857 24116 1 76 0.00191603 373 0 1.0579e+08 0.0373351 6.855e+06 1.06216e+08 7.39577e+06 24142 5.27337e+07 0 0.114495 0.995986 0.844453 1.0579e+08 0.00267549 2.3044e+07 2.44058e+07 2.35408e+07 378 2.34191e+07 1.15842e+07 0.00229537 2.32629e+07 49.8327 0.0645382 0.997 0 50.5331 GTEX-1HSKV-0011-R5b-SM-ARZLN B1, A1 5.7 Brain Brain - Caudate (basal ganglia) 0001873 594 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.978789 1.35242e+06 0.956888 0.981737 0.791837 22179 1 76 0.0024494 164 0 6.3912e+07 0.0429052 4.90889e+06 6.51009e+07 3.54448e+06 22191 3.15173e+07 0 0.165051 0.981737 0.777376 6.3912e+07 0.00369025 1.34583e+07 3.27909e+07 1.38518e+07 187 1.42787e+07 5.9079e+06 0.00306796 1.31582e+07 47.9581 0.0754043 0.984686 0 50.7204 GTEX-1HSKV-0011-R8a-SM-CL54X B1, A1 8 Brain Brain - Hypothalamus 0001898 594 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992883 567168 0.961075 0.994575 0.837912 23969 1 76 0.00239231 267 0 7.91568e+07 0.0386315 4.72869e+06 7.95886e+07 9.82778e+06 23988 3.94138e+07 0 0.123163 0.994575 0.833366 7.91568e+07 0.00374009 1.72519e+07 1.62121e+07 1.76389e+07 288 1.75986e+07 7.75845e+06 0.00306506 1.74168e+07 49.7404 0.0594141 0.996267 0 50.5545 GTEX-1HSKV-0126-SM-E6CI1 1 B1 2 pieces; rare atrophic fibers 8 Muscle Muscle - Skeletal 0011907 736 773 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994973 221610 0.987538 0.996303 0.892008 19950 1 76 0.00144764 271 0 1.12264e+08 0.0122545 1.30224e+06 1.12681e+08 6.68614e+06 19963 5.59658e+07 0 0.0955306 0.996303 0.88871 1.12264e+08 0.00199083 2.4786e+07 1.12082e+07 2.47791e+07 299 2.47141e+07 2.26979e+07 0.00171887 2.49617e+07 50.2492 0.0115569 0.997633 0 49.9931 GTEX-1HSKV-0226-SM-A9SKJ 1 B1 6 pieces; well trimmed, minimal periadnexal fat, epidermis measures ~57 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 736 773 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990141 268342 0.971139 0.991478 0.782094 23680 1 76 0.00650342 183 0 7.37165e+07 0.0285544 268006 7.43501e+07 1.20505e+07 23709 3.67108e+07 0 0.189045 0.991478 0.775429 7.37165e+07 0.00740876 1.59651e+07 9.15269e+06 1.60603e+07 143 1.609e+07 1.28047e+07 0.00695548 1.6027e+07 49.9018 0.00360465 0.992815 0 50.1485 GTEX-1HSKV-0326-SM-ADEJC 1 B1 2 pieces; 1 piece is ~30% vessels/some fibrous tissue 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 737 772 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982332 388786 0.974995 0.98877 0.796082 23924 1 76 0.0033586 279 0 9.643e+07 0.0246736 470967 9.75252e+07 1.0089e+07 23962 4.77765e+07 0 0.178913 0.98877 0.787142 9.643e+07 0.0031685 2.10093e+07 8.78175e+06 2.13561e+07 274 2.15954e+07 1.61594e+07 0.00326417 2.13263e+07 49.6865 0.00482918 0.995208 0 50.4093 GTEX-1HSKV-0426-SM-ADEIY 1 B1 2 pieces; both include 20-30% internal/external fat 6.1 Nerve Nerve - Tibial 0001323 738 771 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980836 468055 0.963524 0.987223 0.72332 25511 1 76 0.00348728 293 0 1.08878e+08 0.036095 289235 1.10287e+08 1.18887e+07 25566 5.39307e+07 0 0.240204 0.987223 0.714078 1.08878e+08 0.00348017 2.38077e+07 1.11387e+07 2.39756e+07 273 2.42985e+07 1.69499e+07 0.00348375 2.41074e+07 49.8026 0.00262257 0.99361 0 50.1757 GTEX-1HSKV-0526-SM-COH38 1 B1 2 pieces; medial calcific sclerosis, concentric plaque 6.2 Blood Vessel Artery - Tibial 0007610 738 771 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99283 278376 0.974542 0.99399 0.831238 21214 1 76 0.00347721 135 0 6.69062e+07 0.0250715 224994 6.73107e+07 7.43371e+06 21228 3.33284e+07 0 0.143304 0.99399 0.826243 6.69062e+07 0.00402369 1.44268e+07 6.0072e+06 1.44822e+07 152 1.4477e+07 1.27541e+07 0.00375013 1.45117e+07 50.0599 0.00334262 0.995151 0 50.096 GTEX-1HSKV-0626-SM-CNPPL 1 B1 6 pieces; atherosclerosis 8.8 Blood Vessel Artery - Aorta 0001496 769 740 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.981937 435790 0.975847 0.985176 0.798222 22074 1 76 0.00612112 116 0 6.09218e+07 0.023722 117619 6.18384e+07 1.71719e+07 22089 3.02294e+07 0 0.177625 0.985176 0.78639 6.09218e+07 0.00828917 1.31944e+07 5.56229e+06 1.31959e+07 122 1.32879e+07 1.11205e+07 0.00720158 1.3293e+07 50.0096 0.00190204 0.988416 0 50.003 GTEX-1HSKV-0726-SM-ACKWE 0 B1 3 pieces; includes typical component of fat/fibrosis 7 Heart Heart - Atrial Appendage 0006631 771 738 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848,LCSET-8322 01/06/2016 TruSeq.v1 RNASEQ 0.992815 252995 0.980373 0.994359 0.819667 22955 1 76 0.00195716 369 0 1.04871e+08 0.0194316 4.32504e+06 1.05466e+08 7.2742e+06 22977 5.22445e+07 0 0.160706 0.994359 0.815043 1.04871e+08 0.00290711 2.29951e+07 1.93816e+07 2.32453e+07 354 2.32366e+07 1.17102e+07 0.0024314 2.31426e+07 49.8987 0.0410089 0.995902 0 50.2705 GTEX-1HSKV-0926-SM-CGQEM 1 B1 2 pieces; residual attached fat up to 20%, calcific atherosclerosis with luminal narrowing 5.8 Blood Vessel Artery - Coronary 0001621 781 728 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.989489 566611 0.962037 0.991461 0.701842 26693 1 76 0.00406375 377 0 1.55049e+08 0.0376112 572244 1.56385e+08 1.10357e+07 26779 7.7119e+07 0 0.260195 0.991461 0.695849 1.55049e+08 0.00420007 3.33838e+07 1.58311e+07 3.34637e+07 392 3.34945e+07 1.9837e+07 0.00412816 3.36076e+07 50.0843 0.00365921 0.993433 0 50.0598 GTEX-1HSKV-1026-SM-B2LWK 2 B1 2 pieces; mild interstitial fibrosis 6 Thyroid Thyroid 0002046 783 726 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990196 393038 0.964094 0.991887 0.698556 23565 1 76 0.00267452 121 0 5.76619e+07 0.0356588 358773 5.81335e+07 3.13564e+06 23606 2.86711e+07 0 0.265538 0.991887 0.692889 5.76619e+07 0.00385187 1.26059e+07 5.24066e+06 1.26956e+07 130 1.27448e+07 7.41108e+06 0.00326219 1.26488e+07 49.8109 0.00617153 0.993579 0 50.1773 GTEX-1HSKV-1126-SM-ADEIA 1 B1 2 pieces; includes pleura (target is 1cm below pleura, some widened air spaces 5.9 Lung Lung 0008952 784 725 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.98201 570247 0.972756 0.988415 0.789828 24926 1 76 0.00349376 376 0 1.18888e+08 0.0268549 321072 1.20281e+08 1.19468e+07 24973 5.88825e+07 0 0.182928 0.988415 0.780678 1.18888e+08 0.00346752 2.60846e+07 1.17056e+07 2.63977e+07 331 2.67078e+07 1.97357e+07 0.00348072 2.64652e+07 49.7719 0.00266934 0.99482 0 50.2983 GTEX-1HSKV-1226-SM-ADEI4 1 B1 6 pieces; well trimmed 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 785 724 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982295 401849 0.975518 0.988605 0.77428 23947 1 76 0.00341278 301 0 9.73434e+07 0.0241909 397107 9.84654e+07 1.02286e+07 23983 4.82376e+07 0 0.201238 0.988605 0.765457 9.73434e+07 0.00307279 2.11374e+07 1.01254e+07 2.13489e+07 265 2.1604e+07 1.66255e+07 0.00324387 2.14285e+07 49.796 0.00403296 0.994915 0 50.2489 GTEX-1HSKV-1726-SM-C1YRO 2 B1 2 pieces; admixed fibromuscular stroma and glands with largely sloughed epithelium, focal chronic prostatitis 6.9 Prostate Prostate 0002367 791 718 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.99007 412983 0.966461 0.992488 0.74243 24856 1 76 0.00191764 207 0 8.94355e+07 0.0331754 635637 9.01124e+07 3.93896e+06 24905 4.44954e+07 0 0.22403 0.992488 0.736853 8.94355e+07 0.00243352 1.98003e+07 8.25967e+06 1.9963e+07 235 2.00027e+07 1.18547e+07 0.00217495 1.99606e+07 49.9474 0.00705382 0.994907 0 50.2045 GTEX-1HSKV-1826-SM-CNPPM 2 B1 2 pieces; many hyalinized tubules, spermatogenesisis present/reduced 6.4 Testis Testis 0000473 794 715 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983296 469856 0.939616 0.986541 0.706404 34018 1 76 0.00570925 210 0 1.06094e+08 0.0601369 1.46585e+06 1.07542e+08 2.74382e+07 34104 5.27186e+07 0 0.233213 0.986541 0.696896 1.06094e+08 0.00855049 2.25029e+07 1.56017e+07 2.27342e+07 213 2.28962e+07 1.41338e+07 0.0071252 2.26518e+07 49.7318 0.0136306 0.989787 0 50.2556 GTEX-1HSKV-1926-SM-CNPPN 1 B1 2 pieces; lobulated mature adipose tissue, 1 piece is ~20% fibrous/vascular 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 795 714 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.982166 246695 0.975431 0.985423 0.813175 23385 1 76 0.00582718 131 0 6.66042e+07 0.0242622 367956 6.75894e+07 1.755e+07 23405 3.30809e+07 0 0.162255 0.985423 0.801322 6.66042e+07 0.0086815 1.4624e+07 7.92336e+06 1.47582e+07 146 1.4808e+07 1.09571e+07 0.00724962 1.47823e+07 49.9565 0.00544399 0.98868 0 50.2283 GTEX-1HSKV-2026-SM-CMKGX 1 B1 3 pieces; some fat with predominance of fibrocollagenous stroma and scattered ducts, some gynecomastoid features (ductal hyperplasia) 5.7 Breast Breast - Mammary Tissue 0008367 796 713 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993743 347019 0.964088 0.994741 0.703321 26124 1 76 0.00225822 215 0 9.64534e+07 0.0356269 590673 9.69633e+07 7.36103e+06 26183 4.80593e+07 0 0.260768 0.994741 0.699622 9.64534e+07 0.00277219 2.11499e+07 8.61419e+06 2.12854e+07 218 2.13107e+07 1.36868e+07 0.00251495 2.12163e+07 49.889 0.00609172 0.995739 0 50.1597 GTEX-1HSKV-2326-SM-A9SL9 1 B1 6 pieces; target muscularis with mild to moderate autolysis, minute strip of residual autolyzed mucosa 5.9 Colon Colon - Sigmoid 0001159 803 706 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989062 257923 0.969732 0.990709 0.799106 24144 1 76 0.00645113 205 0 9.63942e+07 0.030021 1.08644e+06 9.72982e+07 1.74413e+07 24167 4.79956e+07 0 0.170627 0.990709 0.791681 9.63942e+07 0.00822866 2.06922e+07 9.85605e+06 2.09597e+07 239 2.09562e+07 1.39355e+07 0.00733841 2.08431e+07 49.8647 0.0111661 0.992355 0 50.3212 GTEX-1HSKV-2426-SM-A8N8K 1 B1 6 pieces; includes few clusters of submucosal glands 6.2 Esophagus Esophagus - Mucosa 0006920 809 700 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.988776 449836 0.971809 0.990669 0.812385 22989 1 76 0.00813045 201 0 9.31608e+07 0.0279156 1.18687e+06 9.40382e+07 1.29571e+07 23006 4.63557e+07 0 0.159425 0.990669 0.804805 9.31608e+07 0.00815608 2.07963e+07 1.65436e+07 2.11154e+07 234 2.11467e+07 1.41123e+07 0.00814324 2.09457e+07 49.7612 0.0126212 0.992563 0 50.3806 GTEX-1HSKV-2626-SM-CNPPO 1 B1 6 pieces; 3 of 6 include strips of mucosa and clusters of submucosal glands 6.2 Esophagus Esophagus - Muscularis 0004648 811 698 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.981503 222591 0.971234 0.985068 0.799897 22597 1 76 0.00567655 118 0 6.1454e+07 0.0285849 1.29046e+06 6.23855e+07 1.5935e+07 22616 3.05203e+07 0 0.171337 0.985068 0.787953 6.1454e+07 0.00914643 1.33086e+07 6.99371e+06 1.34918e+07 141 1.35454e+07 7.63923e+06 0.00740521 1.34616e+07 49.8449 0.0206852 0.988633 0 50.3418 GTEX-1HSKV-2926-SM-B2LWJ 1 B1 2 pieces; mild to moderate autolysis 6.4 Brain Brain - Cerebellum 0002037 849 660 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.987939 975373 0.951732 0.989762 0.727255 23297 1 76 0.00260136 125 0 6.40043e+07 0.04793 952622 6.46663e+07 2.79498e+06 23320 3.17688e+07 0 0.224476 0.989762 0.71981 6.40043e+07 0.00384174 1.395e+07 8.78538e+06 1.39488e+07 144 1.41274e+07 7.98738e+06 0.00322041 1.38759e+07 49.551 0.0147314 0.991585 0 49.9977 GTEX-1HSKV-3026-SM-A96SL 1 B1 2 pieces; 1 piece includes significant portion of white matter 5.6 Brain Brain - Cortex 0001870 853 656 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992169 390327 0.962738 0.993868 0.820353 23359 1 76 0.001689 266 0 7.79306e+07 0.0370027 4.12588e+06 7.84114e+07 2.60332e+06 23374 3.88308e+07 0 0.142385 0.993868 0.815322 7.79306e+07 0.00220858 1.70169e+07 1.94374e+07 1.72261e+07 268 1.71455e+07 7.20279e+06 0.00194835 1.72105e+07 50.0946 0.0526183 0.995567 0 50.3054 GTEX-1HSKV-3126-SM-CNNQA 2 B1 1 piece; 80% adenohypophysis, 20% neurohypophysis 7.4 Pituitary Pituitary 0000007 854 655 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991394 444052 0.962249 0.99327 0.716952 27109 1 76 0.00245808 271 0 1.16621e+08 0.0375214 775297 1.17411e+08 1.15399e+07 27174 5.80658e+07 0 0.245297 0.99327 0.712126 1.16621e+08 0.00354887 2.52562e+07 1.239e+07 2.5491e+07 322 2.55429e+07 1.42636e+07 0.00300245 2.54055e+07 49.8651 0.00660325 0.995146 0 50.2313 GTEX-1HSMO-0002-SM-EZ6M4 C1 9.4 Blood Cells - EBV-transformed lymphocytes EFO_0000572 669 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991527 992316 0.952504 0.993184 0.803582 22184 1 76 0.00229211 279 0 1.18234e+08 0.0470588 745406 1.19045e+08 8.45006e+06 22219 5.89041e+07 0 0.148922 0.993184 0.798105 1.18234e+08 0.00354668 2.57828e+07 3.86128e+07 2.60744e+07 288 2.61394e+07 2.72035e+07 0.00291835 2.59077e+07 49.7774 0.00626153 0.994842 0 50.2812 GTEX-1HSMO-0003-SM-AG611 C1 Blood Whole Blood 0013756 669 BP-58505 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSMO-0005-SM-ADEGW C1 7.9 Blood Whole Blood 0013756 669 BP-58509 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.936726 186367 0.991458 0.942479 0.818657 16572 1 76 0.00297245 141 0 1.06625e+08 0.00717397 365198 1.13132e+08 1.23431e+07 16574 5.27726e+07 0 0.172801 0.942479 0.771567 1.06625e+08 0.00295229 2.57414e+07 2.06272e+08 2.56618e+07 182 2.59686e+07 3.22501e+07 0.00296243 2.60704e+07 50.0979 0.00322806 0.948231 0 49.9226 GTEX-1HSMO-0011-R10a-SM-CL54Y C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 683 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99213 844911 0.963286 0.994355 0.853764 23743 1 76 0.00231439 373 0 1.15435e+08 0.0363948 1.38101e+07 1.1609e+08 1.49401e+07 23763 5.74555e+07 0 0.109522 0.994355 0.848944 1.15435e+08 0.00412878 2.51252e+07 2.95941e+07 2.58017e+07 393 2.57265e+07 1.12147e+07 0.00321955 2.54353e+07 49.7154 0.11896 0.99658 0 50.6642 GTEX-1HSMO-0011-R1a-SM-CM2SV C1, A1 8.2 Brain Brain - Hippocampus 0001954 683 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994239 875883 0.955385 0.995617 0.846268 22532 1 76 0.00177728 373 0 1.00588e+08 0.0444282 1.30863e+07 1.01031e+08 5.89369e+06 22546 5.01304e+07 0 0.109117 0.995617 0.842559 1.00588e+08 0.00240553 2.1884e+07 3.3861e+07 2.24471e+07 377 2.2201e+07 7.94923e+06 0.00209097 2.22506e+07 50.0557 0.129528 0.996996 0 50.6351 GTEX-1HSMO-0011-R2a-SM-CL553 C1, A1 6.5 Brain Brain - Substantia nigra 0002038 683 BP-71267 RNA isolation_PAXgene Tissue miRNA 01/28/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991626 582598 0.956826 0.99356 0.812605 25236 1 76 0.00246758 379 0 1.19584e+08 0.0429248 1.21296e+07 1.20359e+08 1.55378e+07 25270 5.95249e+07 0 0.144221 0.99356 0.807372 1.19584e+08 0.00394749 2.60615e+07 2.08878e+07 2.68937e+07 413 2.66826e+07 1.30627e+07 0.0032061 2.64832e+07 49.8126 0.100779 0.995494 0 50.7858 GTEX-1HSMO-0011-R8b-SM-CM2SW C1, A1 5.8 Brain Brain - Hypothalamus 0001898 683 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 EXCLUDE 0.99346 459193 0.973016 0.99532 0.860726 19525 1 76 0.00163324 369 0 1.017e+08 0.0268893 2.48729e+07 1.02178e+08 5.93612e+06 19532 5.06779e+07 0 0.11229 0.99532 0.856697 1.017e+08 0.00274109 2.23573e+07 4.11972e+07 2.29512e+07 411 2.25766e+07 3.50286e+06 0.00218613 2.28571e+07 50.3086 0.243428 0.997179 0 50.6554 GTEX-1HSMO-0011-R9b-SM-CM2T2 C1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 683 BP-71267 RNA isolation_PAXgene Tissue miRNA 01/28/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993483 214428 0.961083 0.994639 0.836478 21739 1 76 0.00182379 222 0 7.07102e+07 0.0387025 7.75405e+06 7.10913e+07 4.49051e+06 21750 3.52336e+07 0 0.124604 0.994639 0.831994 7.07102e+07 0.00257639 1.56441e+07 1.10563e+07 1.61594e+07 250 1.58814e+07 7.24469e+06 0.00219966 1.59897e+07 50.1699 0.109072 0.995796 0 50.8101 GTEX-1HSMO-0126-SM-CL547 1 C1 6 pieces; well trimmed; 10% dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 805 1253 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.989811 374515 0.981929 0.991777 0.739141 23410 1 76 0.00279369 176 0 8.7348e+07 0.0178296 1.26228e+06 8.80722e+07 1.21712e+07 23455 4.34381e+07 0 0.242788 0.991777 0.733062 8.7348e+07 0.00402874 1.95789e+07 9.8681e+06 1.97074e+07 181 1.97833e+07 1.48743e+07 0.00340999 1.96741e+07 49.8617 0.0143324 0.993743 0 50.1635 GTEX-1HSMO-0226-SM-CGQEZ 1 C1 2 pieces; minimal fibrous content 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 806 1253 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993486 426388 0.97604 0.994854 0.823399 25251 1 76 0.00357033 384 0 1.73771e+08 0.0236411 1.01535e+06 1.7467e+08 1.21927e+07 25298 8.66124e+07 0 0.152641 0.994854 0.819161 1.73771e+08 0.00336523 3.82837e+07 1.97076e+07 3.85228e+07 407 3.84949e+07 3.02001e+07 0.00347339 3.84937e+07 49.9992 0.00581294 0.996221 0 50.1557 GTEX-1HSMO-0326-SM-CGQF1 1 C1 2 pieces; well trimmed; 10% external fat 7.5 Nerve Nerve - Tibial 0001323 825 1234 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992737 500481 0.962521 0.994399 0.745216 27236 1 76 0.00370502 385 0 1.73056e+08 0.037247 810594 1.74031e+08 1.26791e+07 27305 8.62145e+07 0 0.217305 0.994399 0.741043 1.73056e+08 0.00362665 3.77811e+07 1.77521e+07 3.79701e+07 390 3.79737e+07 2.42618e+07 0.00366798 3.80038e+07 50.0198 0.00465777 0.996062 0 50.1247 GTEX-1HSMO-0526-SM-ACKXB 1 C1 2 pieces; scattered atrophic fibers; 20% mostly external fat 8.2 Muscle Muscle - Skeletal 0011907 842 1218 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993074 396330 0.975524 0.994487 0.810948 23578 1 76 0.00255613 286 0 1.36595e+08 0.0242343 1.06811e+06 1.37352e+08 1.87881e+07 23613 6.80675e+07 0 0.164576 0.994487 0.806478 1.36595e+08 0.00330997 2.96359e+07 2.04275e+07 2.98729e+07 320 2.99314e+07 2.68528e+07 0.00293251 2.97519e+07 49.8496 0.00777647 0.9959 0 50.1992 GTEX-1HSMO-0626-SM-ACKXC 1 C1 6 pieces; well trimmed; <5% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 862 1199 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991868 272328 0.978084 0.993459 0.770011 24207 1 76 0.00280675 284 0 9.54304e+07 0.0216196 582915 9.60587e+07 1.27952e+07 24243 4.75193e+07 0 0.208074 0.993459 0.764974 9.54304e+07 0.00382727 2.1091e+07 1.1442e+07 2.12618e+07 258 2.12921e+07 1.65697e+07 0.0033162 2.12063e+07 49.8991 0.00606832 0.99505 0 50.2017 GTEX-1HSMO-0726-SM-A96TM 1 C1 2 pieces; well dissected 6.4 Thyroid Thyroid 0002046 864 1197 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991479 236654 0.962308 0.992938 0.739519 23397 1 76 0.00202269 136 0 6.71399e+07 0.0374165 263495 6.76175e+07 2.37309e+06 23422 3.3445e+07 0 0.222789 0.992938 0.734296 6.71399e+07 0.00258011 1.45933e+07 6.69934e+06 1.47061e+07 144 1.47208e+07 1.12859e+07 0.00230099 1.46737e+07 49.9199 0.00389685 0.994397 0 50.1926 GTEX-1HSMO-0826-SM-ADEIV 1 C1 2 pieces; fibrofatty tissue with 1 minute focus of ducts (arrowed) 6.5 Breast Breast - Mammary Tissue 0008367 866 1196 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981871 389649 0.977573 0.988342 0.795967 22816 1 76 0.00348337 210 0 9.02786e+07 0.0221121 878524 9.13435e+07 1.04851e+07 22843 4.47197e+07 0 0.181605 0.988342 0.786688 9.02786e+07 0.00325086 1.96836e+07 1.17628e+07 2.01176e+07 233 2.03802e+07 1.56618e+07 0.00336787 1.99526e+07 49.4698 0.0096178 0.994812 0 50.5452 GTEX-1HSMO-0926-SM-A96S7 2 C1 2 pieces; severe interstitial fibrosis (correlates with clinical diagnosis); may be of limited use 5.9 Lung Lung 0008952 868 1194 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991042 244578 0.977438 0.992537 0.756899 23306 1 76 0.00213575 160 0 8.13841e+07 0.0222761 942129 8.19961e+07 2.78737e+06 23340 4.05301e+07 0 0.22054 0.992537 0.75125 8.13841e+07 0.00247094 1.80175e+07 8.53452e+06 1.81982e+07 196 1.81978e+07 1.33986e+07 0.00230309 1.81367e+07 49.9158 0.0114899 0.994031 0 50.2494 GTEX-1HSMO-1126-SM-CGQF2 1 C1 2 pieces; 10% peripheral fat on 1 piece; 10% blood clots 6.9 Heart Heart - Atrial Appendage 0006631 873 1190 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993822 519898 0.974634 0.995403 0.794939 25542 1 76 0.00351889 374 0 1.69006e+08 0.0251767 7.30926e+06 1.69787e+08 1.15501e+07 25602 8.42395e+07 0 0.179695 0.995403 0.791285 1.69006e+08 0.00351994 3.62338e+07 1.93179e+07 3.65116e+07 393 3.65513e+07 2.40871e+07 0.00351939 3.6399e+07 49.8956 0.0430497 0.996984 0 50.1909 GTEX-1HSMO-1226-SM-CL548 1 C1 2 pieces; scattered foci (10%) of hypereosinophilia, edema, and polys, with other foci of fibrosis consistent with recent and old infarcts 7.1 Heart Heart - Left Ventricle 0006566 874 1190 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992117 439872 0.976702 0.99387 0.81234 23721 1 76 0.00248099 274 0 1.03825e+08 0.0230968 3.27381e+06 1.04466e+08 1.32524e+07 23753 5.16922e+07 0 0.164362 0.99387 0.80736 1.03825e+08 0.00386786 2.2563e+07 1.24976e+07 2.27711e+07 287 2.28001e+07 1.79382e+07 0.0031732 2.27092e+07 49.9002 0.0313386 0.995622 0 50.2295 GTEX-1HSMO-1426-SM-CNNQN 1 C1 2 pieces; 5% fibrovascular content 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 877 1188 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.9913 291718 0.978033 0.993661 0.819117 24030 1 76 0.00230259 277 0 1.04558e+08 0.0216753 720278 1.05225e+08 1.11198e+07 24058 5.20447e+07 0 0.158917 0.993661 0.813924 1.04558e+08 0.00371668 2.29047e+07 1.22254e+07 2.32284e+07 307 2.32603e+07 2.00628e+07 0.00300795 2.31102e+07 49.8381 0.00684515 0.996022 0 50.3508 GTEX-1HSMO-1726-SM-A9SKO 2 C1 6 pieces; 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 880 1186 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.989991 184272 0.973045 0.991381 0.785229 22561 1 76 0.00537546 128 0 6.79916e+07 0.0267493 2.49432e+06 6.85826e+07 9.55239e+06 22577 3.3851e+07 0 0.187816 0.991381 0.778462 6.79916e+07 0.00645496 1.50485e+07 8.41982e+06 1.52275e+07 151 1.52e+07 9.72812e+06 0.00591446 1.51662e+07 49.9443 0.0363696 0.992772 0 50.2957 GTEX-1HSMO-2026-SM-CNNQO 3 C1 2 pieces; endocrine elements better preserved than exocrine 5.9 Pancreas Pancreas 0001150 885 1183 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991405 457663 0.967159 0.993712 0.791607 23107 1 76 0.00236478 170 0 9.78747e+07 0.0326992 961126 9.84939e+07 1.08126e+07 23142 4.87271e+07 0 0.175552 0.993712 0.78663 9.78747e+07 0.00367398 2.19299e+07 2.27396e+07 2.21949e+07 193 2.22793e+07 2.18905e+07 0.00301786 2.20758e+07 49.7707 0.00975822 0.99602 0 50.3003 GTEX-1HSMO-2326-SM-CGQF3 2 C1 2 pieces; glands totally autolyzed, stroma intact; stroma predominates 5.7 Prostate Prostate 0002367 889 1182 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990958 296123 0.970232 0.992511 0.795399 26220 1 76 0.00380317 377 0 1.57608e+08 0.0295392 4.2787e+06 1.58797e+08 1.22771e+07 26273 7.85052e+07 0 0.174833 0.992511 0.789442 1.57608e+08 0.00364962 3.44566e+07 1.69723e+07 3.48914e+07 415 3.47595e+07 2.15554e+07 0.00373058 3.47895e+07 50.0215 0.0269445 0.994063 0 50.3135 GTEX-1HSMO-2426-SM-A9G24 2 C1 2 pieces; spermatogenesis greatly reduced; 30% parenchymal fibrosis 5.9 Testis Testis 0000473 891 1181 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984598 261534 0.921481 0.989529 0.681294 33759 1 76 0.00402418 169 0 8.76138e+07 0.0782831 1.86153e+06 8.85409e+07 8.1827e+06 33836 4.34926e+07 0 0.240187 0.989529 0.67416 8.76138e+07 0.00409258 1.80667e+07 1.37492e+07 1.82859e+07 180 1.8438e+07 1.04428e+07 0.00405776 1.82803e+07 49.7852 0.0210245 0.994461 0 50.3016 GTEX-1HSMO-2526-SM-A9SKP 2 C1 6 pieces; well dissected 6.8 Colon Colon - Sigmoid 0001159 895 1177 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989664 241625 0.969069 0.991071 0.78415 22723 1 76 0.00669974 123 0 6.70898e+07 0.0307142 834478 6.76942e+07 1.24849e+07 22744 3.33946e+07 0 0.184918 0.991071 0.777149 6.70898e+07 0.0078811 1.44478e+07 8.77115e+06 1.45595e+07 132 1.45291e+07 1.07187e+07 0.00728958 1.45746e+07 50.0782 0.0123272 0.992478 0 50.1926 GTEX-1HSMO-2926-SM-C1YR5 1 C1 4 pieces 6.5 Brain Brain - Cerebellum 0002037 903 1171 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988286 686280 0.938902 0.991071 0.734557 23366 1 76 0.00194452 265 0 8.38457e+07 0.060867 3.73774e+06 8.46012e+07 4.0638e+06 23397 4.16809e+07 0 0.204345 0.991071 0.727998 8.38457e+07 0.00265195 1.79005e+07 2.36084e+07 1.81859e+07 258 1.81874e+07 7.46794e+06 0.00229724 1.8105e+07 49.8865 0.0441807 0.993855 0 50.3953 GTEX-1HSMO-3026-SM-A9G3F 1 C1 4 pieces 6.4 Brain Brain - Cortex 0001870 904 1171 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985939 288170 0.961024 0.991236 0.810084 24130 1 76 0.00384016 267 0 8.33042e+07 0.0386818 5.76471e+06 8.40407e+07 8.0861e+06 24148 4.13433e+07 0 0.150941 0.991236 0.802984 8.33042e+07 0.00392951 1.80609e+07 1.51588e+07 1.8401e+07 261 1.84657e+07 8.76452e+06 0.00388401 1.83684e+07 49.868 0.0685943 0.996532 0 50.4664 GTEX-1HSMO-3126-SM-CNNQP 2 C1 1 piece; neurohypophysis 50% 7.2 Pituitary Pituitary 0000007 905 1171 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991093 677577 0.943097 0.993207 0.711029 26552 1 76 0.00238357 273 0 1.08224e+08 0.0566637 1.15597e+06 1.08965e+08 1.16333e+07 26613 5.38762e+07 0 0.232068 0.993207 0.706199 1.08224e+08 0.00352671 2.27903e+07 3.21981e+07 2.31001e+07 280 2.31766e+07 1.58691e+07 0.00295392 2.29322e+07 49.735 0.0106087 0.995322 0 50.3376 GTEX-1HSMP-0002-SM-AG612 B1 Blood Whole Blood 0013756 -241 BP-58505 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSMP-0006-SM-AHZ25 B1 7.6 Blood Whole Blood 0013756 -241 BP-58509 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2014 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.963929 431036 0.976295 0.965259 0.829527 16864 1 76 0.00717646 96 0 8.15703e+07 0.0217823 268354 8.45061e+07 1.55908e+07 16865 4.05427e+07 0 0.146768 0.965259 0.800709 8.15703e+07 0.00911515 1.89075e+07 1.23368e+08 1.90959e+07 117 1.90308e+07 2.16797e+07 0.00814447 1.90983e+07 50.0886 0.00317556 0.966589 0 50.2479 GTEX-1HSMP-0126-SM-E6CJS 0 B1 6 pieces, trace dermal fat ;squamous epithelium is ~30-40 microns 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 321 682 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993098 209105 0.97273 0.994386 0.79191 24098 1 76 0.00206817 223 0 8.37425e+07 0.0270444 496409 8.42154e+07 5.54252e+06 24126 4.1712e+07 0 0.18082 0.994386 0.787463 8.37425e+07 0.00267584 1.83354e+07 7.90415e+06 1.85083e+07 219 1.84067e+07 1.39213e+07 0.00237161 1.85308e+07 50.168 0.00589452 0.995673 0 50.2347 GTEX-1HSMP-0226-SM-CGQFI 0 B1 2 pieces; 10% vascular/fascia elements 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 341 662 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993731 508516 0.976944 0.995198 0.812779 26076 1 76 0.00374099 388 0 1.76422e+08 0.0227604 420133 1.77273e+08 1.2772e+07 26127 8.79366e+07 0 0.164165 0.995198 0.808876 1.76422e+08 0.00356867 3.88052e+07 1.50205e+07 3.90753e+07 403 3.90283e+07 3.14953e+07 0.00365955 3.90447e+07 50.0105 0.00236998 0.996666 0 50.1734 GTEX-1HSMP-0326-SM-A9SMC 0 B1 2 pieces, trace interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 353 650 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990918 226481 0.977024 0.992189 0.859638 19760 1 76 0.00673727 132 0 6.54379e+07 0.022759 865449 6.59531e+07 1.23146e+07 19767 3.26066e+07 0 0.117386 0.992189 0.852923 6.54379e+07 0.00747446 1.40748e+07 8.26101e+06 1.43478e+07 133 1.4332e+07 1.21406e+07 0.0071054 1.41592e+07 49.6967 0.0131222 0.993459 0 50.4803 GTEX-1HSMP-0526-SM-B2LXI 0 B1 2 pieces, no atherosis, minute foci of Monckeberg medial sclerosis, delineated. 8.2 Blood Vessel Artery - Tibial 0007610 368 635 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991756 493512 0.976783 0.993545 0.833162 20518 1 76 0.00236688 124 0 5.52573e+07 0.0228238 106718 5.56163e+07 2.35613e+06 20529 2.74898e+07 0 0.143621 0.993545 0.827784 5.52573e+07 0.00377951 1.20047e+07 3.4664e+06 1.20706e+07 129 1.20936e+07 1.09889e+07 0.00307193 1.20774e+07 49.9665 0.00191883 0.995335 0 50.1367 GTEX-1HSMP-0826-SM-A9SKW 1 B1 6 pieces, atherosis up to ~0.5mm; adherent serosal fat up to ~2mm, delineated (rep) 7.2 Blood Vessel Artery - Aorta 0001496 376 627 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990937 237016 0.974294 0.992234 0.831843 21987 1 76 0.0065918 137 0 7.25403e+07 0.0252889 274710 7.31081e+07 1.2914e+07 22001 3.61275e+07 0 0.142451 0.992234 0.825382 7.25403e+07 0.00765461 1.5762e+07 5.81809e+06 1.58799e+07 141 1.5898e+07 1.38409e+07 0.00712251 1.58325e+07 49.8968 0.00375759 0.99353 0 50.1862 GTEX-1HSMP-0926-SM-A9SKX 0 B1 6 pieces, no dermal fat; squamous epithelium is ~30-40 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 378 625 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989661 305036 0.974727 0.991251 0.828525 24718 1 76 0.0064572 224 0 1.02785e+08 0.0250004 646885 1.03692e+08 1.70403e+07 24748 5.11918e+07 0 0.146202 0.991251 0.821276 1.02785e+08 0.00832326 2.26728e+07 1.30421e+07 2.29236e+07 236 2.29416e+07 1.88515e+07 0.00738873 2.28064e+07 49.8523 0.0062385 0.992842 0 50.2751 GTEX-1HSMP-1126-SM-B2LXJ 1 B1 2 pieces, ~10-15% fascia/vascular elements; rep delineated 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 383 620 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989653 821471 0.976543 0.992069 0.830151 22705 1 76 0.00250881 154 0 6.99179e+07 0.0231646 562812 7.04768e+07 3.20598e+06 22722 3.47359e+07 0 0.146392 0.992069 0.823567 6.99179e+07 0.00409895 1.54475e+07 6.18120e+06 1.55585e+07 171 1.55841e+07 1.19717e+07 0.00330195 1.55753e+07 49.9859 0.00798578 0.994485 0 50.179 GTEX-1HSMP-1226-SM-A8N9X 2 B1 2 pieces, moderately advanced saponification overall; Islets still visible (rep delineated) but moderately degenerating 5.9 Pancreas Pancreas 0001150 385 618 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.934957 6.87677e+06 0.67926 0.936957 0.467283 21990 1 76 0.0106357 103 0 7.23389e+07 0.319205 1.23158e+06 7.72062e+07 1.46693e+07 22003 3.59388e+07 0 0.211977 0.936957 0.437824 7.23389e+07 0.0100489 1.10132e+07 2.94429e+08 1.15972e+07 104 1.16068e+07 9.66334e+06 0.0103429 1.12846e+07 49.2964 0.0159518 0.938956 0 51.2915 GTEX-1HSMP-1326-SM-A96TR 1 B1 2 pieces, minimal congestion 7.6 Lung Lung 0008952 389 614 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993806 159466 0.972041 0.995017 0.78007 23814 1 76 0.00208268 141 0 6.67387e+07 0.0276351 244922 6.7073e+07 2.24244e+06 23846 3.32657e+07 0 0.191971 0.995017 0.776182 6.67387e+07 0.00247607 1.47829e+07 5.19328e+06 1.49127e+07 151 1.48931e+07 1.16197e+07 0.00227913 1.4879e+07 49.9763 0.00365157 0.996227 0 50.2185 GTEX-1HSMP-1526-SM-A8N9Y 1 B1 6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness 7.4 Esophagus Esophagus - Mucosa 0006920 416 587 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984286 266504 0.975936 0.986598 0.831056 23412 1 76 0.0112523 163 0 9.24749e+07 0.0236556 762876 9.37311e+07 1.75408e+07 23428 4.59697e+07 0 0.14488 0.986598 0.819918 9.24749e+07 0.0113272 2.05751e+07 1.65387e+07 2.08601e+07 193 2.08841e+07 1.62183e+07 0.0112897 2.07612e+07 49.8525 0.00813899 0.988911 0 50.344 GTEX-1HSMP-1826-SM-E9TIB 1 B1 6 pieces, confirmed target muscularis 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 428 575 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.990773 564624 0.974815 0.992056 0.81501 26129 1 76 0.00205146 398 0 2.11948e+08 0.0249008 2.02241e+06 2.13645e+08 1.15128e+07 26195 1.05561e+08 0 0.159805 0.992056 0.808536 2.11948e+08 0.00257568 4.59638e+07 1.87533e+07 4.65218e+07 386 4.61931e+07 3.73122e+07 0.00231323 4.65302e+07 50.1818 0.00946622 0.99334 0 50.3017 GTEX-1HSMP-1926-SM-A8N8A 1 B1 3 pieces, >95% glandular elements; excellent specimen 6.7 Salivary Gland Minor Salivary Gland 0006330 433 570 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986327 281453 0.971826 0.988451 0.775607 25123 1 76 0.0111098 170 0 8.8689e+07 0.0277772 402443 8.97252e+07 1.56509e+07 25159 4.40813e+07 0 0.196219 0.988451 0.76665 8.8689e+07 0.0107997 1.96415e+07 1.39182e+07 2.00358e+07 173 2.00986e+07 1.34402e+07 0.0109551 1.97664e+07 49.5834 0.00448529 0.990576 0 50.4969 GTEX-1HSMP-2126-SM-A8N8B 1 B1 "6 pieces, approaches score ""2"" in pfoci; mucosa up to ~0.7mm, ~25-30% thickness" 6.7 Stomach Stomach 0000945 437 566 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983546 236421 0.976256 0.985755 0.821392 24760 1 76 0.0113016 253 0 9.56321e+07 0.0227658 975300 9.70141e+07 1.77065e+07 24781 4.75138e+07 0 0.154865 0.985755 0.809691 9.56321e+07 0.0110841 2.13414e+07 5.14713e+07 2.18828e+07 205 2.18516e+07 1.83358e+07 0.0111931 2.15756e+07 49.6822 0.0100532 0.987963 0 50.6262 GTEX-1HSMP-2326-SM-D3L8R 3 B1 6 pieces, mucosa up to ~0.4mm, glandular mucosa with advanced autolysis/sloughing 7.9 Colon Colon - Transverse 0001157 441 562 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990839 470831 0.978127 0.993327 0.832321 23683 1 76 0.00256525 280 0 1.04383e+08 0.0215481 661027 1.05084e+08 1.086e+07 23706 5.19431e+07 0 0.145806 0.993327 0.826767 1.04383e+08 0.0038234 2.27943e+07 8.54785e+06 2.30869e+07 313 2.31295e+07 1.92874e+07 0.00319275 2.29944e+07 49.8536 0.00629045 0.995815 0 50.3189 GTEX-1HSMQ-0001-SM-EZ6M5 B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -100 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991634 1.76205e+06 0.928347 0.992968 0.775587 22748 1 76 0.00251797 289 0 1.28953e+08 0.0710306 866623 1.29866e+08 9.39945e+06 22788 6.42626e+07 0 0.152761 0.992968 0.770133 1.28953e+08 0.00324175 2.73018e+07 7.91093e+07 2.77326e+07 301 2.77745e+07 2.90242e+07 0.00287937 2.74394e+07 49.6966 0.00667322 0.994302 0 50.3913 GTEX-1HSMQ-0004-SM-AG5ZW B1 Blood Whole Blood 0013756 -100 BP-58505 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/01/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HSMQ-0006-SM-ARU6N B1 6.6 Blood Whole Blood 0013756 -100 BP-58509 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992694 652577 0.965233 0.994143 0.821743 17885 1 76 0.00256625 136 0 7.66223e+07 0.0342568 178044 7.70738e+07 2.46529e+06 17896 3.81506e+07 0 0.14349 0.994143 0.81693 7.66223e+07 0.00368106 1.69366e+07 3.57596e+07 1.70055e+07 155 1.70738e+07 1.64479e+07 0.00312284 1.69796e+07 49.8617 0.00231005 0.995592 0 50.1016 GTEX-1HSMQ-0126-SM-D4P2I 1 B1 2 pieces 7 Spleen Spleen 0002106 290 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.990239 397223 0.96164 0.991692 0.735171 26373 1 76 0.00344364 375 0 1.24056e+08 0.0364173 1.02e+06 1.25096e+08 1.57493e+07 26429 6.16779e+07 0 0.22647 0.991692 0.729063 1.24056e+08 0.00445481 2.71285e+07 1.82142e+07 2.74915e+07 334 2.74934e+07 1.73553e+07 0.00394849 2.72909e+07 49.8152 0.00815373 0.993144 0 50.3323 GTEX-1HSMQ-0226-SM-C1YQL 0 B1 2 pieces 8.3 Heart Heart - Left Ventricle 0006566 297 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.991017 516351 0.979978 0.993358 0.846716 22070 1 76 0.00205088 370 0 1.09008e+08 0.0198145 2.60563e+06 1.09737e+08 4.8224e+06 22092 5.42711e+07 0 0.133263 0.993358 0.841092 1.09008e+08 0.00246584 2.37091e+07 1.4794e+07 2.40458e+07 335 2.39915e+07 1.78818e+07 0.00225787 2.39707e+07 49.9782 0.0237443 0.995699 0 50.3525 GTEX-1HSMQ-0326-SM-D4P2J 1 B1 6 pieces; atherosclerosis 6.8 Blood Vessel Artery - Aorta 0001496 299 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993481 384684 0.972161 0.994831 0.79724 24206 1 76 0.00263852 379 0 1.2253e+08 0.0274163 552363 1.23166e+08 1.56373e+07 24248 6.10454e+07 0 0.174921 0.994831 0.793119 1.2253e+08 0.00379575 2.64023e+07 9.41632e+06 2.66889e+07 335 2.66831e+07 2.23105e+07 0.00321635 2.65628e+07 49.8871 0.00448469 0.99618 0 50.2699 GTEX-1HSMQ-0426-SM-ADEIM 0 B1 2 pieces; includes detached fragment of spleen, small amount of internal fat and fibrous component 8.2 Heart Heart - Atrial Appendage 0006631 301 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.983254 702597 0.976933 0.98963 0.83694 23826 1 76 0.00352601 277 0 1.42618e+08 0.0227298 2.99496e+06 1.44112e+08 1.5069e+07 23858 7.06809e+07 0 0.139992 0.98963 0.828261 1.42618e+08 0.00336558 3.00047e+07 2.3004e+07 3.07265e+07 319 3.09429e+07 2.52624e+07 0.00344631 3.05481e+07 49.679 0.0207821 0.996007 0 50.5943 GTEX-1HSMQ-0526-SM-A96TY 1 B1 2 pieces; mild interstitial fibrosis, ~10% is fat/fibrous/vessels 7.7 Thyroid Thyroid 0002046 308 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99329 194003 0.970829 0.994611 0.775903 23509 1 76 0.00201799 164 0 7.92382e+07 0.0288451 195319 7.96675e+07 2.71765e+06 23546 3.94967e+07 0 0.194925 0.994611 0.771722 7.92382e+07 0.00241678 1.74418e+07 6.63768e+06 1.75490e+07 176 1.75603e+07 1.49841e+07 0.00221712 1.75262e+07 49.9514 0.00245168 0.995932 0 50.1532 GTEX-1HSMQ-0626-SM-CL54A 1 B1 2 pieces; fragment of arterial wall with atherosclerosis 7.3 Blood Vessel Artery - Coronary 0001621 310 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991803 569795 0.97112 0.99364 0.817583 22437 1 76 0.00250277 278 0 1.14268e+08 0.0284599 792601 1.15e+08 1.40993e+07 22470 5.6875e+07 0 0.153537 0.99364 0.812383 1.14268e+08 0.0044086 2.47232e+07 1.06368e+07 2.48212e+07 319 2.48883e+07 2.17285e+07 0.00345392 2.48549e+07 49.9664 0.00689219 0.995476 0 50.0988 GTEX-1HSMQ-0726-SM-B2LXY 0 B1 2 pieces; some fibrosis and numerous pigmented macrophages, includes larger vessels/bronchi 8.3 Lung Lung 0008952 311 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99246 401969 0.973772 0.993801 0.803045 23504 1 76 0.00268617 158 0 7.46904e+07 0.0258072 446107 7.51563e+07 3.29965e+06 23528 3.71781e+07 0 0.170727 0.993801 0.798068 7.46904e+07 0.00379955 1.65878e+07 5.45163e+06 1.66798e+07 171 1.6717e+07 1.35008e+07 0.00324211 1.66463e+07 49.894 0.00593572 0.995143 0 50.1382 GTEX-1HSMQ-0826-SM-A8N8H 1 B1 2 pieces; includes minimal fat, islets are well visualized 7.5 Pancreas Pancreas 0001150 317 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984525 391409 0.978774 0.987031 0.840374 23287 1 76 0.011184 110 0 9.59072e+07 0.0208304 346377 9.71673e+07 1.79118e+07 23308 4.76575e+07 0 0.1384 0.987031 0.829476 9.59072e+07 0.0115824 2.20515e+07 3.37207e+07 2.22937e+07 122 2.23393e+07 2.84091e+07 0.0113827 2.22553e+07 49.9059 0.00356475 0.989538 0 50.273 GTEX-1HSMQ-0926-SM-A96SI 1 B1 2 pieces; well trimmed, salivary gland elements with small component of internal fat 7.8 Salivary Gland Minor Salivary Gland 0006330 315 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.988781 427649 0.966882 0.990394 0.749599 24830 1 76 0.00281765 214 0 8.92519e+07 0.0301227 294305 9.01176e+07 2.87128e+06 24879 4.43169e+07 0 0.217282 0.990394 0.742399 8.92519e+07 0.00335756 1.99229e+07 1.53502e+07 1.99798e+07 232 2.00717e+07 1.42456e+07 0.00308716 1.99621e+07 49.8631 0.00326579 0.992007 0 50.0712 GTEX-1HSMQ-1026-SM-ADEHU 0 B1 2 pieces; lobulated mature fat 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 319 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982738 729191 0.974357 0.989187 0.810581 25321 1 76 0.00341893 384 0 1.47479e+08 0.0253283 859897 1.49091e+08 1.55474e+07 25360 7.30818e+07 0 0.163776 0.989187 0.801816 1.47479e+08 0.00348155 3.20908e+07 1.60001e+07 3.25747e+07 340 3.29737e+07 2.58663e+07 0.00345003 3.2539e+07 49.6683 0.00576758 0.995635 0 50.3742 GTEX-1HSMQ-1226-SM-CGQFX 1 B1 6 pieces; essentially well trimmed, but with up to 10% periadnexal fat, epidermis measures 34 microns 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 375 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992544 564540 0.973522 0.994219 0.797789 26129 1 76 0.00383778 407 0 1.414e+08 0.0261811 908921 1.42222e+08 1.01224e+07 26180 7.04405e+07 0 0.175733 0.994219 0.793177 1.414e+08 0.00386786 3.08704e+07 1.39224e+07 3.09801e+07 402 3.09922e+07 2.43145e+07 0.00385199 3.10486e+07 50.0455 0.00639084 0.995894 0 50.0887 GTEX-1HSMQ-1326-SM-ADEHS 0 B1 2 pieces; skeletal muscle with <10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 387 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.983213 514530 0.982843 0.989597 0.880015 20550 1 76 0.00324752 279 0 1.2068e+08 0.0168513 2.58789e+06 1.21948e+08 1.25367e+07 20561 5.98216e+07 0 0.102828 0.989597 0.87086 1.2068e+08 0.00330215 2.57532e+07 1.57012e+07 2.62587e+07 317 2.65214e+07 2.53534e+07 0.00327466 2.61481e+07 49.6457 0.0212212 0.995981 0 50.4859 GTEX-1HSMQ-1426-SM-ADEHT 1 B1 2 pieces; fat with 10-20% fibrous tissue 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 395 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982495 363648 0.97542 0.988945 0.810608 23556 1 76 0.00348929 283 0 1.02434e+08 0.0242709 791458 1.03579e+08 1.14661e+07 23590 5.07572e+07 0 0.164812 0.988945 0.801647 1.02434e+08 0.00344566 2.21823e+07 1.00594e+07 2.25387e+07 282 2.27726e+07 1.84402e+07 0.00346762 2.25405e+07 49.7439 0.00764113 0.995394 0 50.3984 GTEX-1HSMQ-1526-SM-ADEIB 0 B1 2 pieces; small attachment of fat on both pieces (up to ~10%) 6.6 Nerve Nerve - Tibial 0001323 397 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981201 567411 0.964041 0.987678 0.686443 26111 1 76 0.00376864 292 0 1.2325e+08 0.0356778 541672 1.24788e+08 1.39162e+07 26189 6.10357e+07 0 0.277598 0.987678 0.677984 1.2325e+08 0.00353569 2.68641e+07 1.28242e+07 2.70919e+07 289 2.74267e+07 1.71559e+07 0.00365293 2.72465e+07 49.8352 0.00434075 0.994155 0 50.2111 GTEX-1HSMQ-1626-SM-CGQFY 1 B1 2 pieces; well trimmed, some intimal thickening, mild plaque 6.8 Blood Vessel Artery - Tibial 0007610 400 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991558 431583 0.977278 0.993133 0.860756 22992 1 76 0.00364408 485 0 1.67823e+08 0.0223422 1.01456e+06 1.68983e+08 1.23522e+07 23019 8.35744e+07 0 0.116522 0.993133 0.854845 1.67823e+08 0.00395222 3.59639e+07 1.20364e+07 3.61439e+07 429 3.60235e+07 3.25808e+07 0.00378973 3.62871e+07 50.1823 0.00600391 0.994709 0 50.1248 GTEX-1HSMQ-1726-SM-B2LXZ 2 B1 2 pieces; spermatogenesis is present, some tubules are hyalinized 5.6 Testis Testis 0000473 545 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989756 571703 0.923883 0.991579 0.679011 32691 1 76 0.00267087 141 0 7.09462e+07 0.0758594 1.07512e+06 7.15487e+07 3.03155e+06 32753 3.52916e+07 0 0.244872 0.991579 0.673294 7.09462e+07 0.00410728 1.4704e+07 9.06681e+06 1.47833e+07 145 1.48442e+07 9.58117e+06 0.00338775 1.47539e+07 49.8474 0.0150265 0.993403 0 50.1345 GTEX-1HSMQ-1826-SM-A9SMJ 2 B1 2 pieces; admixed glands and fibromuscular stroma, some sloughing of epithelium 6.1 Prostate Prostate 0002367 552 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.990162 291515 0.96629 0.991812 0.782691 24478 1 76 0.00493048 162 0 7.99019e+07 0.0335288 3.7603e+06 8.05616e+07 9.44197e+06 24509 3.9772e+07 0 0.183599 0.991812 0.776282 7.99019e+07 0.00624428 1.73857e+07 9.74946e+06 1.77147e+07 196 1.76671e+07 8.81338e+06 0.00558628 1.75531e+07 49.8382 0.0466761 0.993463 0 50.4686 GTEX-1HSMQ-1926-SM-A9G3O 0 B1 6 pieces; target muscularis, some include small component of residual fat 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 553 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985386 207813 0.973897 0.990807 0.80786 23054 1 76 0.0038757 222 0 8.57105e+07 0.025767 864657 8.65057e+07 8.09456e+06 23084 4.25328e+07 0 0.166037 0.990807 0.800433 8.57105e+07 0.00411493 1.8473e+07 7.85437e+06 1.87855e+07 210 1.89178e+07 1.46276e+07 0.0039931 1.87543e+07 49.783 0.00999537 0.996228 0 50.4194 GTEX-1HSMQ-2026-SM-B2LY1 1 B1 6 pieces; includes several clusters of submucosal glands 8.3 Esophagus Esophagus - Mucosa 0006920 561 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991239 507871 0.972263 0.992895 0.781769 23301 1 76 0.00258189 152 0 7.60811e+07 0.0272939 310056 7.66256e+07 3.15441e+06 23326 3.78679e+07 0 0.190494 0.992895 0.776215 7.60811e+07 0.0038112 1.70706e+07 9.05639e+06 1.71735e+07 158 1.72508e+07 1.47472e+07 0.00319552 1.71136e+07 49.8004 0.00404638 0.99455 0 50.1503 GTEX-1HSMQ-2126-SM-CJI3E 1 B1 6 pieces; target muscularis 8.1 Esophagus Esophagus - Muscularis 0004648 562 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993601 492886 0.974308 0.994613 0.806219 21166 1 76 0.00216876 130 0 5.701e+07 0.0254009 551084 5.73188e+07 3.62041e+06 21185 2.8399e+07 0 0.168089 0.994613 0.801876 5.701e+07 0.00262035 1.23573e+07 4.77401e+06 1.24862e+07 132 1.25063e+07 1.00916e+07 0.00239433 1.23898e+07 49.7661 0.00961436 0.995625 0 50.2595 GTEX-1HSMQ-2226-SM-C1YRD 1 B1 6 pieces; mucosa and submucosa with good lymphoid component 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 557 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988836 505590 0.960289 0.991142 0.723242 25850 1 76 0.00249814 196 0 9.28507e+07 0.0386065 446876 9.36805e+07 4.28364e+06 25901 4.61443e+07 0 0.237047 0.991142 0.716835 9.28507e+07 0.00291872 2.03027e+07 1.03377e+07 2.03822e+07 203 2.04492e+07 1.42488e+07 0.00270795 2.0432e+07 49.9789 0.00477021 0.993447 0 50.0977 GTEX-1HSMQ-2426-SM-CE6RY 2 B1 6 pieces; full thickness sections, mild chronic inflammation 6.9 Stomach Stomach 0000945 565 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989381 450066 0.974505 0.990593 0.811714 23616 1 76 0.00809051 159 0 7.62837e+07 0.0252207 989009 7.70081e+07 1.27798e+07 23636 3.79558e+07 0 0.162792 0.990593 0.804078 7.62837e+07 0.00752971 1.67133e+07 9.25095e+06 1.68179e+07 155 1.68694e+07 1.26687e+07 0.00781046 1.67509e+07 49.8237 0.0128429 0.991804 0 50.1559 GTEX-1HSMQ-2526-SM-A9SMK 1 B1 6 pieces; predominantly muscularis, several pieces include strips of residual mucosa 7.4 Colon Colon - Sigmoid 0001159 572 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.98951 310495 0.972932 0.991117 0.79196 23634 1 76 0.00668358 155 0 8.12186e+07 0.0267269 623288 8.19465e+07 1.48737e+07 23665 4.04315e+07 0 0.180972 0.991117 0.784925 8.12186e+07 0.00818309 1.75977e+07 7.37877e+06 1.77772e+07 152 1.77906e+07 1.39756e+07 0.00743212 1.77052e+07 49.8797 0.00760604 0.992724 0 50.2537 GTEX-1HSMQ-2626-SM-A9SML 1 B1 6 pieces; predominantly well trimmed, but with up to ~10% internal and attached fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 573 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989137 224621 0.975277 0.990788 0.815253 22227 1 76 0.00670265 160 0 6.82027e+07 0.0244604 627059 6.88368e+07 1.25462e+07 22248 3.39529e+07 0 0.160024 0.990788 0.807743 6.82027e+07 0.00855372 1.49387e+07 7.63684e+06 1.50947e+07 141 1.5081e+07 1.14638e+07 0.00762665 1.50585e+07 49.9626 0.00910936 0.992438 0 50.2598 GTEX-1HSMQ-2726-SM-C1YRE 2 B1 6 pieces; full thickness sections, mucosa is moderately autolyzed 6.5 Colon Colon - Transverse 0001157 576 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.9888 465405 0.965383 0.991566 0.748029 25371 1 76 0.00234985 268 0 9.50393e+07 0.034003 1.96592e+06 9.58477e+07 4.24213e+06 25427 4.72483e+07 0 0.217355 0.991566 0.74172 9.50393e+07 0.00316698 2.08442e+07 1.18895e+07 2.10777e+07 257 2.1048e+07 1.17921e+07 0.00275728 2.10994e+07 50.061 0.0205109 0.994332 0 50.2784 GTEX-1HSMQ-5001-SM-AN47P B1 Heart Heart - Left Ventricle 0006566 301 ChIP-Seq GTEX-1HSMQ-5010-SM-AN47Q B1 Muscle Muscle - Skeletal 0011907 387 ChIP-Seq GTEX-1HT8W-0006-SM-A9G17 C1 8 Blood Whole Blood 0013756 1164 BP-58648 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.981938 367758 0.974051 0.988212 0.744225 20544 1 76 0.00385722 117 0 7.31194e+07 0.0253898 244063 7.39916e+07 5.90246e+06 20566 3.62385e+07 0 0.229826 0.988212 0.735452 7.31194e+07 0.00496731 1.66572e+07 6.07859e+07 1.6767e+07 121 1.69552e+07 1.4779e+07 0.00440148 1.69314e+07 49.9649 0.00329852 0.994486 0 50.1641 GTEX-1HT8W-0011-R1b-SM-CJI3V C1, A1 5.7 Brain Brain - Hippocampus 0001954 1183 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992731 757134 0.959466 0.994161 0.863266 22172 1 76 0.00208582 272 0 8.00854e+07 0.0402046 7.55445e+06 8.05558e+07 4.42844e+06 22186 3.98787e+07 0 0.0962004 0.994161 0.858225 8.00854e+07 0.00290156 1.7483e+07 2.03916e+07 1.79146e+07 289 1.78779e+07 9.28568e+06 0.0024931 1.76186e+07 49.6349 0.0937791 0.995592 0 50.6096 GTEX-1HT8W-0011-R2a-SM-CMKH9 C1, A1 6.7 Brain Brain - Substantia nigra 0002038 1183 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994502 770051 0.960724 0.995694 0.838241 24492 1 76 0.00233761 386 0 1.1405e+08 0.0389126 7.98937e+06 1.14543e+08 8.23905e+06 24516 5.6836e+07 0 0.122483 0.995694 0.834632 1.1405e+08 0.00292828 2.48529e+07 2.19513e+07 2.56589e+07 360 2.56016e+07 1.40673e+07 0.00263259 2.50325e+07 49.438 0.0697497 0.996887 0 50.7978 GTEX-1HT8W-0011-R5b-SM-CJI3P C1, A1 5.6 Brain Brain - Caudate (basal ganglia) 0001873 1183 BP-71267 RNA isolation_PAXgene Tissue miRNA 01/28/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991715 1.27206e+06 0.946272 0.993354 0.829642 23077 1 76 0.00225474 371 0 9.22065e+07 0.0535106 7.36496e+06 9.28233e+07 5.69234e+06 23094 4.58887e+07 0 0.11663 0.993354 0.824128 9.22065e+07 0.00286879 1.95794e+07 3.63856e+07 2.03599e+07 362 2.03226e+07 8.69012e+06 0.00256126 1.97615e+07 49.3001 0.0793439 0.994994 0 50.9771 GTEX-1HT8W-0011-R6a-SM-CM2SY C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1183 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993467 1.06906e+06 0.955098 0.994885 0.835095 24846 1 76 0.00213034 374 0 1.14224e+08 0.0444169 5.34315e+06 1.14811e+08 6.90255e+06 24874 5.68825e+07 0 0.120003 0.994885 0.830823 1.14224e+08 0.00273279 2.47918e+07 2.44405e+07 2.51084e+07 359 2.51936e+07 1.51184e+07 0.00243113 2.48691e+07 49.6759 0.0465386 0.996303 0 50.3173 GTEX-1HT8W-0011-R7b-SM-CMKH8 C1, A1 8.8 Brain Brain - Putamen (basal ganglia) 0001874 1183 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993773 1.45453e+06 0.955331 0.994995 0.827837 25557 1 76 0.00226744 376 0 1.53702e+08 0.0443378 1.04695e+07 1.54475e+08 1.09684e+07 25587 7.66074e+07 0 0.127494 0.994995 0.823694 1.53702e+08 0.00313388 3.30464e+07 5.04075e+07 3.37837e+07 366 3.38359e+07 1.61289e+07 0.00270013 3.31812e+07 49.5116 0.0677748 0.996218 0 50.5516 GTEX-1HT8W-0011-R8b-SM-CM2SX C1, A1 7.2 Brain Brain - Hypothalamus 0001898 1183 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993909 801836 0.95756 0.995201 0.844744 24110 1 76 0.00209611 376 0 9.41328e+07 0.0419808 4.66658e+06 9.45867e+07 5.34268e+06 24132 4.68826e+07 0 0.112817 0.995201 0.84069 9.41328e+07 0.00281085 2.06584e+07 1.77816e+07 2.08786e+07 348 2.08478e+07 1.25829e+07 0.00245302 2.08141e+07 49.9595 0.0493365 0.996493 0 50.2651 GTEX-1HT8W-0126-SM-CNPPP 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~50-60 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1230 1306 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984927 378659 0.97732 0.987886 0.800091 23901 1 76 0.00584089 217 0 9.22662e+07 0.0223618 452917 9.33977e+07 2.4243e+07 23932 4.58623e+07 0 0.177228 0.987886 0.790399 9.22662e+07 0.00805606 2.00479e+07 1.32565e+07 2.02369e+07 198 2.03372e+07 1.5566e+07 0.00694516 2.02054e+07 49.8374 0.00484934 0.990845 0 50.2346 GTEX-1HT8W-0226-SM-CMKGT 0 C1 2 pieces, ~30% fascia, rep delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 1232 1305 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.99362 307639 0.974577 0.99462 0.788194 23419 1 76 0.00221553 206 0 8.83901e+07 0.0250899 302190 8.88682e+07 6.30013e+06 23450 4.40383e+07 0 0.186382 0.99462 0.783953 8.83901e+07 0.00315711 1.95237e+07 8.48261e+06 1.96502e+07 211 1.96679e+07 1.52737e+07 0.00268585 1.95937e+07 49.9056 0.00340043 0.995619 0 50.1615 GTEX-1HT8W-0326-SM-CM2SG 0 C1 2 pieces, ~10% interstitial fat/vascalar elements, rep delineated 8.4 Muscle Muscle - Skeletal 0011907 1233 1304 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99474 499174 0.980963 0.995957 0.868849 20940 1 76 0.00181517 373 0 1.15637e+08 0.0187984 1.02852e+06 1.16106e+08 6.67066e+06 20957 5.76405e+07 0 0.112114 0.995957 0.865336 1.15637e+08 0.00258641 2.51635e+07 1.23272e+07 2.53726e+07 332 2.54722e+07 2.52084e+07 0.00220032 2.51869e+07 49.7184 0.00885842 0.997173 0 50.2069 GTEX-1HT8W-0426-SM-ADEJA 0 C1 2 pieces, ~1mm nubbin of adherent fat, delineated 7 Nerve Nerve - Tibial 0001323 1235 1303 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.980739 444836 0.961577 0.987317 0.699228 25278 1 76 0.00366179 223 0 1.00175e+08 0.0381135 244870 1.01462e+08 1.11329e+07 25340 4.95999e+07 0 0.262349 0.987317 0.69036 1.00175e+08 0.00379346 2.18288e+07 9.89779e+06 2.19738e+07 236 2.226e+07 1.44021e+07 0.00372718 2.21367e+07 49.8612 0.00241341 0.993894 0 50.1655 GTEX-1HT8W-0526-SM-ACKW9 0 C1 2 pieces, no adherent fat or significant atherosis 7.4 Blood Vessel Artery - Tibial 0007610 1236 1302 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991406 813904 0.946667 0.993051 0.73843 23188 1 76 0.00300988 209 0 1.01164e+08 0.0529462 458437 1.01872e+08 1.44082e+07 23228 5.03552e+07 0 0.208237 0.993051 0.733299 1.01164e+08 0.00377585 2.11544e+07 3.5797e+07 2.14935e+07 255 2.15176e+07 1.58354e+07 0.00339223 2.12992e+07 49.745 0.00450014 0.994697 0 50.3976 GTEX-1HT8W-0626-SM-A9G2H 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~50 microns 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1238 1301 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987133 210071 0.978288 0.991607 0.809877 22155 1 76 0.00388576 173 0 7.31018e+07 0.0214881 348538 7.37205e+07 6.39379e+06 22180 3.6308e+07 0 0.168411 0.991607 0.803079 7.31018e+07 0.00419516 1.59101e+07 1.02726e+07 1.61595e+07 160 1.62669e+07 1.25775e+07 0.00403774 1.61065e+07 49.7523 0.00472783 0.99608 0 50.3888 GTEX-1HT8W-0726-SM-A9SLB 1 C1 2 pieces, ~5-10% fascia 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1240 1299 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.98994 267275 0.97511 0.991453 0.812461 22889 1 76 0.00536429 133 0 6.64579e+07 0.0245444 328770 6.70308e+07 9.70882e+06 22908 3.30732e+07 0 0.162649 0.991453 0.805517 6.64579e+07 0.00675208 1.46337e+07 7.23542e+06 1.47369e+07 143 1.47587e+07 1.17088e+07 0.00605713 1.47149e+07 49.9257 0.00490476 0.992966 0 50.1757 GTEX-1HT8W-0826-SM-C1YRJ 1 C1 2 pieces, moderate macrovesicular steatosis involving ~80% of parenchyma; severe bridging fibrosis 5.9 Liver Liver 0001114 1241 1299 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989775 410349 0.972805 0.992303 0.838512 22380 1 76 0.0020077 201 0 8.14021e+07 0.0270291 1.75753e+06 8.20334e+07 3.73187e+06 22398 4.04922e+07 0 0.134293 0.992303 0.832059 8.14021e+07 0.00249846 1.78435e+07 1.19409e+07 1.78628e+07 245 1.7809e+07 1.21242e+07 0.00225245 1.80749e+07 50.3706 0.0214245 0.994832 0 50.0271 GTEX-1HT8W-1326-SM-CGQEN 1 C1 2 pieces, significant adipose component (~30-40 %) 6.4 Heart Heart - Atrial Appendage 0006631 1250 1293 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99304 550284 0.978778 0.994555 0.840335 25718 1 76 0.00373995 379 0 2.18575e+08 0.0209162 4.00226e+06 2.19772e+08 1.5353e+07 25761 1.08962e+08 0 0.138443 0.994555 0.835759 2.18575e+08 0.0035184 4.70455e+07 2.33404e+07 4.77491e+07 397 4.77385e+07 3.61927e+07 0.00363533 4.72683e+07 49.7525 0.018211 0.99607 0 50.3712 GTEX-1HT8W-1426-SM-CE6S2 2 C1 2 pieces, moderate congestion 6.3 Lung Lung 0008952 1252 1291 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9106,LCSET-9327 06/16/2016 TruSeq.v1 RNASEQ 0.989502 478069 0.97726 0.991648 0.760885 24994 1 76 0.00400153 376 0 1.19007e+08 0.0224129 627645 1.20009e+08 1.40523e+07 25044 5.91765e+07 0 0.216375 0.991648 0.75453 1.19007e+08 0.00526675 2.65353e+07 1.54869e+07 2.65785e+07 341 2.6726e+07 1.83276e+07 0.00463277 2.66451e+07 49.9242 0.00522998 0.993793 0 50.0407 GTEX-1HT8W-1526-SM-CE6S3 2 C1 2 pieces, moderately advanced autolysis, no abnormalities 6.5 Thyroid Thyroid 0002046 1254 1290 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.984453 407394 0.969972 0.986083 0.799372 24718 1 76 0.00778622 153 0 8.03805e+07 0.0296722 436451 8.1515e+07 1.29557e+07 24751 3.99542e+07 0 0.170601 0.986083 0.788247 8.03805e+07 0.00811561 1.76631e+07 9.19344e+06 1.77142e+07 156 1.78051e+07 1.42068e+07 0.00795064 1.77035e+07 49.857 0.00535424 0.987712 0 50.0721 GTEX-1HT8W-1526-SM-DKTQF 2 C1 2 pieces, moderately advanced autolysis, no abnormalities Thyroid Thyroid 0002046 1254 1290 BP-70666 DNA Extraction from Paxgene-derived Lysate Plate Based 01/11/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1HT8W-1726-SM-CNNQB 1 C1 2 pieces, mild/moderate interstitial fibrosis/chronic ischemic changes 5.8 Heart Heart - Left Ventricle 0006566 1257 1288 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991639 169415 0.984325 0.994085 0.861861 21156 1 76 0.00284241 365 0 9.79084e+07 0.015608 8.28722e+06 9.8491e+07 1.08632e+07 21168 4.87591e+07 0 0.122464 0.994085 0.856763 9.79084e+07 0.00420615 2.16323e+07 2.27185e+07 2.27122e+07 372 2.28279e+07 4.86239e+06 0.00352261 2.17272e+07 48.7648 0.0841419 0.996531 0 51.2176 GTEX-1HT8W-1826-SM-ADEJD 1 C1 6 pieces, atherosis up to ~0.2mm 5.7 Blood Vessel Artery - Aorta 0001496 1258 1287 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7849,LCSET-8322 01/06/2016 TruSeq.v1 RNASEQ 0.984148 331196 0.97038 0.98867 0.739103 22783 1 76 0.00314365 142 0 7.51625e+07 0.0292523 249582 7.60238e+07 5.4176e+06 22816 3.72617e+07 0 0.231277 0.98867 0.730729 7.51625e+07 0.0032456 1.62366e+07 6.70825e+06 1.63446e+07 160 1.64691e+07 1.16794e+07 0.00319439 1.64231e+07 49.9301 0.00328294 0.993193 0 50.1657 GTEX-1HT8W-2026-SM-CNNQC 1 C1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Muscularis 0004648 1262 1285 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989167 415703 0.969555 0.991542 0.80579 23826 1 76 0.00274068 206 0 8.72014e+07 0.0302167 1.73162e+06 8.79453e+07 1.06419e+07 23855 4.33467e+07 0 0.163765 0.991542 0.798974 8.72014e+07 0.00402458 1.87774e+07 7.84954e+06 1.91724e+07 240 1.91567e+07 1.12867e+07 0.00338109 1.89896e+07 49.781 0.0196897 0.993916 0 50.5204 GTEX-1HT8W-2126-SM-ACKW7 1 C1 6 pieces, confirmed target muscularis 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 1263 1284 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.989783 187886 0.96695 0.992081 0.788345 23298 1 76 0.00322914 190 0 7.62529e+07 0.0328711 2.3097e+06 7.68616e+07 1.1057e+07 23327 3.79378e+07 0 0.178605 0.992081 0.782102 7.62529e+07 0.00431612 1.66388e+07 9.01132e+06 1.70055e+07 204 1.6981e+07 8.09058e+06 0.00377137 1.68205e+07 49.7625 0.0300501 0.994379 0 50.545 GTEX-1HT8W-2226-SM-CGQEC 1 C1 2 pieces, fibroadipose elements only 6.7 Breast Breast - Mammary Tissue 0008367 1271 1277 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992238 416203 0.975728 0.993766 0.823923 25650 1 76 0.00390251 488 0 1.61928e+08 0.0239723 962081 1.62944e+08 1.20799e+07 25699 8.06566e+07 0 0.151805 0.993766 0.818787 1.61928e+08 0.00380064 3.56707e+07 2.02762e+07 3.60276e+07 426 3.59861e+07 2.62728e+07 0.00385436 3.59119e+07 49.9484 0.00590437 0.995294 0 50.2489 GTEX-1HT8W-2326-SM-A9SLA 2 C1 6 pieces, mucosa up to ~1mm, moderate-advanced autolysis 6.1 Stomach Stomach 0000945 1282 1266 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.990038 330465 0.969205 0.991744 0.802985 24246 1 76 0.00499986 207 0 9.34815e+07 0.0305672 2.06636e+06 9.42596e+07 1.44557e+07 24278 4.65254e+07 0 0.166219 0.991744 0.796356 9.34815e+07 0.00615891 2.03388e+07 1.10645e+07 2.06435e+07 242 2.06062e+07 1.17664e+07 0.00557838 2.05247e+07 49.901 0.021922 0.993451 0 50.3717 GTEX-1HT8W-2926-SM-A8NA9 1 C1 4 pieces, no abnormalities 7.2 Brain Brain - Cerebellum 0002037 1293 1259 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985579 377378 0.945037 0.987667 0.702982 24610 1 76 0.0111005 131 0 8.70841e+07 0.0545238 902741 8.81716e+07 1.53786e+07 24644 4.32522e+07 0 0.242055 0.987667 0.694312 8.70841e+07 0.0105769 1.87162e+07 1.39608e+07 1.89193e+07 157 1.89951e+07 1.07598e+07 0.0108393 1.88136e+07 49.7601 0.0102385 0.989755 0 50.2698 GTEX-1HT8W-3026-SM-CGQEO 1 C1 4 pieces, no abnormalities 5.5 Brain Brain - Cortex 0001870 1295 1258 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.994351 831153 0.96626 0.99582 0.851127 26996 1 76 0.00366339 381 0 2.20679e+08 0.0332889 6.40388e+06 2.21605e+08 1.45466e+07 27029 1.09998e+08 0 0.115133 0.99582 0.84757 2.20679e+08 0.00351288 4.85583e+07 3.01691e+07 4.90408e+07 416 4.90789e+07 2.75727e+07 0.00359232 4.87394e+07 49.8265 0.0288977 0.997289 0 50.2472 GTEX-1HT8W-3126-SM-CNNQD 2 C1 1 pieces, mainly adenohypophysis; trace nubbin (~1mm) neurohypophysis, delineated 6.8 Pituitary Pituitary 0000007 1296 1257 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990986 369077 0.95677 0.993162 0.784989 25138 1 76 0.00236014 210 0 9.13244e+07 0.0429645 375474 9.19531e+07 9.93544e+06 25168 4.54641e+07 0 0.171781 0.993162 0.779621 9.13244e+07 0.00379051 1.88705e+07 1.62562e+07 1.91321e+07 221 1.91693e+07 1.55338e+07 0.00307375 1.90206e+07 49.8054 0.00408332 0.995339 0 50.3442 GTEX-1HUB1-0002-SM-AG5ZX B1 Blood Whole Blood 0013756 611 BP-58643 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1HUB1-0005-SM-ARL74 B1 7.5 Blood Whole Blood 0013756 611 BP-58648 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.98102 702924 0.964106 0.981731 0.767947 17598 1 76 0.00202143 91 0 6.34433e+07 0.035404 142529 6.46239e+07 3.04796e+06 17606 3.14843e+07 0 0.196159 0.981731 0.753917 6.34433e+07 0.00287891 1.44731e+07 9.94744e+07 1.4744e+07 109 1.49458e+07 1.60357e+07 0.00244986 1.43355e+07 48.9579 0.00220552 0.982442 0 50.4637 GTEX-1HUB1-0011-R11b-SM-CE6SC B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 655 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987107 660227 0.946344 0.98901 0.762501 22659 1 76 0.00801396 133 0 6.32773e+07 0.0534574 2.86026e+06 6.39804e+07 1.1057e+07 22681 3.14399e+07 0 0.183844 0.98901 0.754121 6.32773e+07 0.00738463 1.35928e+07 1.63708e+07 1.39228e+07 155 1.39349e+07 4.77248e+06 0.0076999 1.36877e+07 49.5525 0.0447052 0.990913 0 50.5998 GTEX-1HUB1-0011-R3b-SM-CKZOX B1, A1 8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 655 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991739 971437 0.955794 0.993893 0.833066 23731 1 76 0.00165129 370 0 9.74612e+07 0.0439168 6.92231e+06 9.80601e+07 9.14284e+06 23747 4.85387e+07 0 0.122728 0.993893 0.827978 9.74612e+07 0.00276085 2.11164e+07 3.18659e+07 2.15798e+07 338 2.15301e+07 9.0423e+06 0.00220487 2.13515e+07 49.7917 0.0705925 0.996046 0 50.5426 GTEX-1HUB1-0011-R5a-SM-CKZOY B1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 655 BP-71192 RNA isolation_PAXgene Tissue miRNA 01/26/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991828 859798 0.960694 0.994045 0.824251 24345 1 76 0.00164203 269 0 1.07372e+08 0.0390932 6.87983e+06 1.08016e+08 1.00854e+07 24370 5.34741e+07 0 0.136443 0.994045 0.819343 1.07372e+08 0.00283791 2.32574e+07 3.39194e+07 2.38206e+07 329 2.3721e+07 9.49626e+06 0.00223863 2.35567e+07 49.8262 0.0636929 0.996262 0 50.5982 GTEX-1HUB1-0011-R6b-SM-ARU6W B1, A1 6.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 655 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992637 550306 0.960466 0.994161 0.843858 22655 1 76 0.00169689 265 0 7.86925e+07 0.0393674 5.62817e+06 7.91547e+07 2.65234e+06 22670 3.91991e+07 0 0.116607 0.994161 0.838931 7.86925e+07 0.0024448 1.72558e+07 1.85451e+07 1.74452e+07 311 1.74651e+07 6.66359e+06 0.00207027 1.73362e+07 49.8148 0.0711035 0.995686 0 50.2729 GTEX-1HUB1-0126-SM-E9U4T 0 B1 2 pieces; up to 0.5mm thick external fat on both 7.2 Nerve Nerve - Tibial 0001323 790 890 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985291 254509 0.967081 0.986155 0.733631 23669 1 76 0.00196262 139 0 6.3701e+07 0.0326345 178580 6.45953e+07 2.73449e+06 23708 3.17297e+07 0 0.23345 0.986155 0.723473 6.3701e+07 0.0029485 1.40143e+07 6.63556e+06 1.40715e+07 146 1.4033e+07 9.85567e+06 0.00245513 1.41095e+07 50.1358 0.0027646 0.987019 0 50.1017 GTEX-1HUB1-0226-SM-ADEHI 1 B1 2 pieces; extensive calcified atheromatous plaques centrally with thin rim of relatively normal wall at the periphery 7 Blood Vessel Artery - Tibial 0007610 792 888 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981806 452095 0.973923 0.988313 0.782083 23465 1 76 0.00342162 210 0 8.96992e+07 0.0256925 375254 9.07599e+07 9.58207e+06 23507 4.44165e+07 0 0.19184 0.988313 0.772943 8.96992e+07 0.00341614 1.93669e+07 8.44112e+06 1.95655e+07 228 1.98303e+07 1.54312e+07 0.0034189 1.96230e+07 49.7374 0.00413458 0.99482 0 50.255 GTEX-1HUB1-0326-SM-A9SKQ 0 B1 2 pieces; 10% fibrovascular content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 799 881 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989163 330570 0.973894 0.990838 0.795675 24479 1 76 0.006686 212 0 9.79213e+07 0.0257832 381532 9.88267e+07 1.83473e+07 24517 4.87483e+07 0 0.178219 0.990838 0.788385 9.79213e+07 0.00793896 2.14522e+07 1.08546e+07 2.16505e+07 216 2.16753e+07 1.71318e+07 0.00731142 2.15782e+07 49.8877 0.00386062 0.992513 0 50.23 GTEX-1HUB1-0426-SM-E9U4U 0 B1 6 pieces; 5-10% dermal fat; well trimmed 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 801 879 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.99099 383454 0.974009 0.991903 0.801549 24976 1 76 0.00180064 283 0 9.86528e+07 0.0256633 380903 9.94581e+07 3.52799e+06 25017 4.91728e+07 0 0.17246 0.991903 0.795059 9.86528e+07 0.00258389 2.17096e+07 9.01581e+06 2.1805e+07 289 2.17899e+07 1.83691e+07 0.0021919 2.18121e+07 50.0255 0.00382978 0.992816 0 50.1096 GTEX-1HUB1-0526-SM-CL54N 0 B1 2 pieces; striations preserved; 5-10% internal fibrovascular content 7.7 Muscle Muscle - Skeletal 0011907 803 877 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993194 895646 0.981241 0.994817 0.855532 21340 1 76 0.00211323 373 0 1.17354e+08 0.0185083 1.12828e+06 1.17965e+08 1.34938e+07 21362 5.84347e+07 0 0.125709 0.994817 0.851097 1.17354e+08 0.00344049 2.49761e+07 1.41395e+07 2.52934e+07 369 2.53962e+07 2.32854e+07 0.00277578 2.50346e+07 49.6415 0.00956452 0.99644 0 50.3157 GTEX-1HUB1-0626-SM-CYPR9 0 B1 6 pieces; minimal plaque; well trimmed adventitia 6 Blood Vessel Artery - Aorta 0001496 805 875 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.992711 340606 0.970954 0.993402 0.75983 22354 1 76 0.00244603 156 0 7.89166e+07 0.0286986 202710 7.94407e+07 5.69333e+06 22385 3.92903e+07 0 0.211123 0.993402 0.754817 7.89166e+07 0.00295242 1.70764e+07 6.96149e+06 1.71648e+07 182 1.70871e+07 1.23062e+07 0.00269905 1.72142e+07 50.1852 0.00255171 0.994094 0 50.1292 GTEX-1HUB1-0726-SM-CGQF4 0 B1 2 pieces; High (60%) peripheral fibrofatty content on 1, and 10% peripheral fibrous content on other 5.6 Heart Heart - Atrial Appendage 0006631 814 866 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992966 256056 0.98145 0.994542 0.832156 24440 1 76 0.00339825 517 0 1.76117e+08 0.0183996 9.399e+06 1.77084e+08 1.24107e+07 24492 8.77804e+07 0 0.149295 0.994542 0.827614 1.76117e+08 0.0032739 3.92445e+07 2.16874e+07 3.99618e+07 465 3.97803e+07 1.60425e+07 0.00333948 3.9623e+07 49.901 0.0530765 0.996119 0 50.4528 GTEX-1HUB1-1226-SM-B2LWX 2 B1 2 pieces; nodular hyperplasia with prominent amounts of colloid 6.3 Thyroid Thyroid 0002046 832 848 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990388 588275 0.973424 0.992065 0.74236 23761 1 76 0.00262286 138 0 7.05304e+07 0.026263 203368 7.10946e+07 3.19541e+06 23790 3.50855e+07 0 0.231063 0.992065 0.73647 7.05304e+07 0.00365951 1.56248e+07 6.80971e+06 1.56924e+07 151 1.57399e+07 1.16551e+07 0.00314031 1.56917e+07 49.9234 0.00286053 0.993742 0 50.1079 GTEX-1HUB1-1426-SM-CGQF5 0 B1 6 pieces; <5% dermal fat; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 834 846 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992204 484820 0.974746 0.993911 0.783731 27221 1 76 0.00369584 481 0 1.67175e+08 0.0249748 809701 1.682e+08 1.18615e+07 27284 8.32711e+07 0 0.191016 0.993911 0.778959 1.67175e+08 0.00366356 3.69126e+07 1.60725e+07 3.7091e+07 421 3.70672e+07 2.64978e+07 0.00368059 3.71638e+07 50.0651 0.00481393 0.995618 0 50.1205 GTEX-1HUB1-1526-SM-CGQF6 1 B1 2 pieces; 10% fibrovascular content in 1, 1% in other 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 838 842 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990449 274868 0.975012 0.992098 0.788734 25802 1 76 0.00378292 502 0 1.66782e+08 0.0246786 1.51084e+06 1.6811e+08 1.25588e+07 25856 8.30528e+07 0 0.186279 0.992098 0.782501 1.66782e+08 0.00384342 3.65831e+07 1.89117e+07 3.68552e+07 422 3.68223e+07 2.40068e+07 0.00381152 3.68392e+07 50.0114 0.00898721 0.993748 0 50.1852 GTEX-1HUB1-1626-SM-CM2SL 1 B1 2 pieces; proliferating ducts and fibrous stroma consistent with gynecomastoid hyperplasia 7.1 Breast Breast - Mammary Tissue 0008367 843 837 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992714 332629 0.972301 0.993959 0.737836 25388 1 76 0.0021406 213 0 9.84105e+07 0.0274168 375404 9.90086e+07 6.48391e+06 25437 4.90049e+07 0 0.234465 0.993959 0.733379 9.84105e+07 0.00282346 2.17456e+07 9.12211e+06 2.18224e+07 243 2.18589e+07 1.53677e+07 0.0024816 2.18309e+07 49.968 0.00379163 0.995204 0 50.0882 GTEX-1HUB1-2026-SM-A96S8 1 B1 2 pieces; active spermatogenesis; rete testis sampled in 1 piece [10%, outlined] 6.8 Testis Testis 0000473 852 828 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991299 377672 0.920809 0.992675 0.700198 33600 1 76 0.00199278 180 0 8.86176e+07 0.0788538 475275 8.92715e+07 3.09942e+06 33679 4.41537e+07 0 0.220611 0.992675 0.695069 8.86176e+07 0.00237515 1.821e+07 1.20216e+07 1.83024e+07 195 1.83728e+07 1.43317e+07 0.0021837 1.82432e+07 49.8231 0.00532393 0.994051 0 50.1266 GTEX-1HUB1-2826-SM-A8N81 1 B1 1 piece; all adenohypophysis; no neural component 6.9 Pituitary Pituitary 0000007 907 773 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985767 312379 0.95961 0.988196 0.743818 25890 1 76 0.0110715 132 0 8.26889e+07 0.0401791 417779 8.36766e+07 1.56324e+07 25935 4.10853e+07 0 0.215792 0.988196 0.735038 8.26889e+07 0.0109604 1.68946e+07 1.17671e+07 1.71219e+07 149 1.71873e+07 1.24611e+07 0.0110161 1.70259e+07 49.7641 0.00499278 0.990626 0 50.3342 GTEX-1HUB1-2926-SM-ACKXA 1 B1 4 fragmented pieces; focus of meninges [marked] 6.4 Brain Brain - Cortex 0001870 903 777 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992813 213092 0.96734 0.994329 0.830623 23992 1 76 0.00251828 271 0 9.65567e+07 0.032434 5.54471e+06 9.71074e+07 1.28325e+07 24010 4.81062e+07 0 0.136717 0.994329 0.825913 9.65567e+07 0.00338179 2.11532e+07 1.7037e+07 2.16675e+07 320 2.15346e+07 8.7388e+06 0.00294938 2.13968e+07 49.8395 0.0570988 0.995845 0 50.6005 GTEX-1I19N-0002-SM-AG61I C1 Blood Whole Blood 0013756 726 BP-58643 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1I19N-0006-SM-A9G18 C1 7.1 Blood Whole Blood 0013756 726 BP-58648 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.982917 378329 0.976449 0.988067 0.747876 19275 1 76 0.00411287 114 0 7.88299e+07 0.022933 333167 7.97819e+07 7.23466e+06 19291 3.91067e+07 0 0.228573 0.988067 0.738952 7.88299e+07 0.0044154 1.7875e+07 6.15545e+07 1.80933e+07 131 1.82534e+07 1.54705e+07 0.00426136 1.81156e+07 49.8105 0.00417597 0.993218 0 50.3035 GTEX-1I19N-0011-R11b-SM-ARU6Y C1, A1 5.8 Brain Brain - Cerebellar Hemisphere 0002037 725 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990508 540655 0.946749 0.991861 0.735868 23004 1 76 0.00236038 269 0 8.51208e+07 0.0528683 2.11798e+06 8.58192e+07 2.73512e+06 23042 4.23667e+07 0 0.21088 0.991861 0.72988 8.51208e+07 0.00288376 1.83641e+07 1.24012e+07 1.85029e+07 263 1.85282e+07 9.00681e+06 0.00262171 1.84357e+07 49.8749 0.0246796 0.993215 0 50.1882 GTEX-1I19N-0011-R5b-SM-ARU6X C1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 725 BP-66985 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991982 566894 0.958596 0.993271 0.827222 23841 1 76 0.00200749 270 0 7.79885e+07 0.0411307 5.57049e+06 7.85168e+07 2.71156e+06 23863 3.88524e+07 0 0.131374 0.993271 0.821656 7.79885e+07 0.0025449 1.69697e+07 1.57189e+07 1.73611e+07 286 1.72987e+07 8.87052e+06 0.00227585 1.71212e+07 49.7422 0.0709465 0.994561 0 50.5701 GTEX-1I19N-0011-R6b-SM-CY8GC C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 725 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989111 906433 0.946465 0.991645 0.815224 23891 1 76 0.00440236 200 0 8.0515e+07 0.0533172 6.81303e+06 8.11934e+07 8.8233e+06 23908 4.0035e+07 0 0.131241 0.991645 0.808412 8.0515e+07 0.00775986 1.73278e+07 2.37172e+07 1.76303e+07 231 1.75598e+07 7.7326e+06 0.00607682 1.75898e+07 50.0427 0.0839111 0.994178 0 50.4326 GTEX-1I19N-0011-R9a-SM-CMKHN C1, A1 6.5 Brain Brain - Spinal cord (cervical c-1) 0006469 725 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994751 527282 0.958624 0.995819 0.82716 23426 1 76 0.00206402 391 0 9.6712e+07 0.0410248 4.16621e+06 9.7118e+07 7.00512e+06 23449 4.82018e+07 0 0.131464 0.995819 0.823701 9.6712e+07 0.00304755 2.1364e+07 1.3958e+07 2.18124e+07 357 2.15495e+07 1.32496e+07 0.00255526 2.17246e+07 50.2023 0.0428984 0.996887 0 50.5192 GTEX-1I19N-0126-SM-CYPSF 1 C1 6 pieces; insignificant subcutaneous and periadnexal fat; epidermis ~34 micron thick 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 737 1215 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993663 273092 0.973766 0.994571 0.763649 24309 1 76 0.00227451 166 0 7.93511e+07 0.0259375 620188 7.97842e+07 5.47372e+06 24340 3.95462e+07 0 0.210117 0.994571 0.759504 7.93511e+07 0.00308679 1.75931e+07 8.79948e+06 1.76929e+07 175 1.76752e+07 1.36776e+07 0.00268028 1.76868e+07 50.0165 0.00777332 0.99548 0 50.1414 GTEX-1I19N-0226-SM-CE6ST 2 C1 2 pieces; mild to moderate autolysis and sloughed follicular epithelium; small portion of attached fat and skeletal muscle fibers (outlined) 6.2 Thyroid Thyroid 0002046 742 1210 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.985602 331306 0.96437 0.987446 0.751717 23897 1 76 0.00751173 119 0 6.43218e+07 0.0353492 403668 6.51396e+07 9.57761e+06 23926 3.19781e+07 0 0.212653 0.987446 0.74228 6.43218e+07 0.00818132 1.40338e+07 8.24855e+06 1.40881e+07 124 1.41423e+07 1.03187e+07 0.0078459 1.40973e+07 49.9202 0.00619696 0.98929 0 50.0967 GTEX-1I19N-0326-SM-ACKVX 1 C1 6 pieces; essentially well trimmed; insignificant subcutaneous and periadnexal fat; epidermis measures 33 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 744 1209 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991338 327902 0.970168 0.993201 0.756732 25543 1 76 0.0029265 283 0 1.04781e+08 0.029553 774556 1.05498e+08 1.46201e+07 25587 5.21622e+07 0 0.213437 0.993201 0.751586 1.04781e+08 0.00389635 2.29222e+07 1.24049e+07 2.31335e+07 268 2.31652e+07 1.71794e+07 0.00341052 2.30699e+07 49.8969 0.00734187 0.995063 0 50.2295 GTEX-1I19N-0426-SM-ACKVY 1 C1 3 pieces; mature adipose tissue with trace of fibrovascular component and nerves (arrows) 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 745 1208 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992186 270695 0.970609 0.993491 0.747297 24800 1 76 0.00287713 279 0 1.00663e+08 0.0290762 853023 1.01322e+08 1.32548e+07 24843 5.01364e+07 0 0.223312 0.993491 0.742433 1.00663e+08 0.00350972 2.21201e+07 1.10517e+07 2.23257e+07 264 2.23271e+07 1.58799e+07 0.00319301 2.22431e+07 49.9057 0.00841889 0.994795 0 50.2312 GTEX-1I19N-0526-SM-A9G27 1 C1 2 pieces; areas of atelectasis and adjacent widened air spaces; congestion; anthracosis; thick walled vessels 7.1 Lung Lung 0008952 747 1207 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.981239 232027 0.970768 0.987854 0.7412 24975 1 76 0.0043348 168 0 8.62724e+07 0.028769 268878 8.73331e+07 8.6835e+06 25006 4.27207e+07 0 0.229567 0.987854 0.732198 8.62724e+07 0.00423591 1.8807e+07 9.35187e+06 1.9109e+07 175 1.93396e+07 1.37905e+07 0.00428633 1.91074e+07 49.6981 0.00307876 0.99447 0 50.3983 GTEX-1I19N-0626-SM-A9SKY 1 C1 2 pieces; congested with small amount of internal fat 8.1 Heart Heart - Atrial Appendage 0006631 748 1206 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990038 390313 0.976058 0.991453 0.776349 24470 1 76 0.00680704 160 0 9.40217e+07 0.0231037 1.7241e+06 9.48322e+07 1.73546e+07 24499 4.6786e+07 0 0.199709 0.991453 0.769714 9.40217e+07 0.00774642 2.02053e+07 1.02999e+07 2.04485e+07 180 2.04868e+07 1.59453e+07 0.00727606 2.02861e+07 49.7538 0.0181805 0.992869 0 50.2992 GTEX-1I19N-1026-SM-A96TT 1 C1 2 pieces; one piece fragmented; mature adipose tissue with ~50% fibrous content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 754 1202 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992711 144488 0.974617 0.994161 0.824083 22393 1 76 0.00192007 134 0 5.70274e+07 0.0250368 358712 5.73624e+07 2.04384e+06 22404 2.84101e+07 0 0.150534 0.994161 0.819271 5.70274e+07 0.00247216 1.25048e+07 6.43387e+06 1.26602e+07 138 1.26422e+07 1.11246e+07 0.00219571 1.2605e+07 49.9263 0.00625344 0.99561 0 50.3088 GTEX-1I19N-1826-SM-CGQFJ 1 C1 2 pieces; one contains ~10% internal fat 6.5 Nerve Nerve - Tibial 0001323 765 1195 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.98521 470064 0.966265 0.987206 0.726245 26848 1 76 0.00380174 389 0 1.53135e+08 0.0334449 620465 1.5512e+08 1.15137e+07 26926 7.62134e+07 0 0.24002 0.987206 0.716954 1.53135e+08 0.0041594 3.36769e+07 1.50956e+07 3.38155e+07 416 3.38212e+07 2.15576e+07 0.00397068 3.39216e+07 50.0741 0.00399991 0.989201 0 50.1027 GTEX-1I19N-1926-SM-CM2TF 1 C1 2 pieces; well trimmed; intimal thickening/mild plaque 6.9 Blood Vessel Artery - Tibial 0007610 766 1195 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992377 210652 0.97041 0.993691 0.779751 22673 1 76 0.00206344 211 0 9.09477e+07 0.0292225 475427 9.15251e+07 5.39306e+06 22713 4.52709e+07 0 0.19066 0.993691 0.774831 9.09477e+07 0.00291372 1.95891e+07 6.76375e+06 1.96247e+07 225 1.96464e+07 1.5908e+07 0.00248802 1.96816e+07 50.0447 0.0051945 0.995005 0 50.0454 GTEX-1I19N-2026-SM-ACKXJ 1 C1 2 pieces; ~15 and 30% internal fat 8.3 Muscle Muscle - Skeletal 0011907 768 1193 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993291 340947 0.976616 0.994724 0.835066 22460 1 76 0.00247137 284 0 1.23675e+08 0.0231105 1.52430e+06 1.24331e+08 1.72263e+07 22486 6.16269e+07 0 0.14155 0.994724 0.83066 1.23675e+08 0.00318559 2.67553e+07 1.40901e+07 2.69157e+07 312 2.69449e+07 2.54405e+07 0.00282797 2.68886e+07 49.9478 0.01226 0.996157 0 50.1494 GTEX-1I19N-2226-SM-A96TS 2 C1 2 pieces; fibromuscular stroma with multinodular parenchyma; glands severely autolyzed, epithelial hyperplasia 5.6 Prostate Prostate 0002367 771 1191 BP-65801 RNA Extraction from Paxgene-derived Lysate Plate Based 07/29/2015 LCSET-7845,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.991895 324757 0.959822 0.992972 0.69754 27645 1 76 0.00257823 377 0 1.41826e+08 0.0396939 1.38733e+06 1.4283e+08 8.08101e+06 27726 7.06325e+07 0 0.262282 0.992972 0.692638 1.41826e+08 0.00340777 3.08863e+07 1.52641e+07 3.10991e+07 373 3.10506e+07 1.93483e+07 0.00299255 3.109e+07 50.0317 0.00971317 0.994048 0 50.1716 GTEX-1I19N-2326-SM-CE6SU 1 C1 2 pieces; atrophy with lack of spermatogenesis, thickening of tubular basement membrane, interstitial fibrosis; congestion 5.9 Testis Testis 0000473 773 1190 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.986941 387376 0.961004 0.98864 0.710358 24725 1 76 0.00820435 119 0 6.68774e+07 0.0388073 2.15447e+06 6.76459e+07 1.12756e+07 24758 3.3237e+07 0 0.250646 0.98864 0.702288 6.68774e+07 0.00779952 1.46816e+07 8.07233e+06 1.48154e+07 136 1.49174e+07 7.12051e+06 0.00800228 1.46869e+07 49.6107 0.0318493 0.990339 0 50.2268 GTEX-1I19N-2826-SM-CL55D 1 C1 2 pieces; mature adipose tissue with fibrovasular component and couple of ductal structures (outlined) 6 Breast Breast - Mammary Tissue 0008367 782 1183 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99132 209903 0.979075 0.992839 0.831425 24133 1 76 0.00252329 282 0 1.01976e+08 0.0205575 1.20999e+06 1.02711e+08 1.3619e+07 24161 5.07755e+07 0 0.14765 0.992839 0.825471 1.01976e+08 0.00382808 2.24156e+07 1.19364e+07 2.2743e+07 279 2.27082e+07 1.98926e+07 0.00317469 2.26058e+07 49.887 0.0117805 0.994357 0 50.3625 GTEX-1I19N-2926-SM-A8N8C 2 C1 4 fragmented pieces; Purkinje cells present 6.1 Brain Brain - Cerebellum 0002037 786 1180 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983608 614055 0.936941 0.986277 0.696854 25867 1 76 0.0113194 268 0 1.07191e+08 0.0627609 3.47901e+06 1.08683e+08 2.04749e+07 25910 5.32226e+07 0 0.240087 0.986277 0.687291 1.07191e+08 0.0110816 2.26795e+07 3.58307e+07 2.32888e+07 259 2.33401e+07 9.34668e+06 0.0112008 2.28804e+07 49.5027 0.0320107 0.988946 0 50.6628 GTEX-1I19N-3026-SM-CL55E 1 C1 4 pieces; mild to moderate autolysis 6 Brain Brain - Cortex 0001870 788 1178 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991157 918947 0.956535 0.993424 0.80686 25328 1 76 0.00249546 371 0 1.14416e+08 0.0431614 7.30346e+06 1.15174e+08 1.4839e+07 25355 5.69301e+07 0 0.149676 0.993424 0.801554 1.14416e+08 0.00436994 2.47632e+07 3.1009e+07 2.53421e+07 403 2.53741e+07 1.22735e+07 0.00343056 2.49649e+07 49.5935 0.0634126 0.99569 0 50.5777 GTEX-1I19N-3126-SM-CNNQQ 1 C1 1 piece; adenohypophysis ~90% and neurohypophysis ~10% (outlined) 6.1 Pituitary Pituitary 0000007 789 1178 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990989 377010 0.958212 0.993306 0.782877 24963 1 76 0.00233832 156 0 7.11423e+07 0.0414625 861130 7.16217e+07 7.70279e+06 24995 3.54074e+07 0 0.175335 0.993306 0.777636 7.11423e+07 0.00378374 1.51914e+07 1.43722e+07 1.54363e+07 166 1.54804e+07 1.11932e+07 0.00305935 1.53061e+07 49.7168 0.0120233 0.995622 0 50.3998 GTEX-1I1CD-0004-SM-AG5ZU C1 Blood Whole Blood 0013756 585 BP-58643 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1CD-0005-SM-ADEGY C1 8.3 Blood Whole Blood 0013756 585 BP-58648 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.956694 601487 0.977359 0.963259 0.763006 19897 1 76 0.00337045 195 0 1.17386e+08 0.0215011 331759 1.21864e+08 1.15866e+07 19916 5.80808e+07 0 0.214353 0.963259 0.734972 1.17386e+08 0.0042817 2.71544e+07 1.58798e+08 2.73221e+07 220 2.76674e+07 2.8044e+07 0.00382297 2.75814e+07 49.9221 0.00272238 0.969823 0 50.1539 GTEX-1I1CD-0011-R10b-SM-CJI3W C1, A1 5.8 Brain Brain - Frontal Cortex (BA9) 0009834 594 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992677 821580 0.967538 0.994098 0.837664 23274 1 76 0.00229236 371 0 1.08949e+08 0.0322519 9.05208e+06 1.09596e+08 7.23944e+06 23289 5.42513e+07 0 0.129874 0.994098 0.83272 1.08949e+08 0.00265285 2.32126e+07 3.30122e+07 2.43829e+07 371 2.41365e+07 9.38175e+06 0.00247235 2.35557e+07 49.391 0.0825952 0.995519 0 51.2293 GTEX-1I1CD-0011-R2a-SM-CM2T3 C1, A1 5.7 Brain Brain - Substantia nigra 0002038 594 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992874 213010 0.974573 0.994403 0.857438 21304 1 76 0.00221734 372 0 7.70066e+07 0.0253002 7.79065e+06 7.744e+07 4.87637e+06 21315 3.83516e+07 0 0.117135 0.994403 0.852639 7.70066e+07 0.0032075 1.67746e+07 1.78621e+07 1.74523e+07 341 1.70608e+07 5.09440e+06 0.00271166 1.72352e+07 50.2543 0.100602 0.995932 0 50.9901 GTEX-1I1CD-0011-R6b-SM-CJI3Y C1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 594 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993228 1.1722e+06 0.961445 0.9944 0.820076 24841 1 76 0.0022036 373 0 1.26327e+08 0.0382351 5.7321e+06 1.27039e+08 7.90335e+06 24868 6.29143e+07 0 0.141369 0.9944 0.815484 1.26327e+08 0.00256605 2.70464e+07 3.33272e+07 2.78292e+07 352 2.7778e+07 1.44706e+07 0.00238461 2.7226e+07 49.4982 0.0451209 0.995572 0 50.7133 GTEX-1I1CD-0011-R7a-SM-CMKHA C1, A1 6.9 Brain Brain - Putamen (basal ganglia) 0001874 594 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994722 556769 0.962555 0.995832 0.816697 24253 1 76 0.00212434 385 0 1.25423e+08 0.0371567 4.93676e+06 1.25948e+08 8.88534e+06 24286 6.25207e+07 0 0.145858 0.995832 0.813293 1.25423e+08 0.00289975 2.73041e+07 1.72366e+07 2.80385e+07 358 2.78491e+07 1.56209e+07 0.00251161 2.75974e+07 49.773 0.039197 0.996942 0 50.6635 GTEX-1I1CD-0011-R8b-SM-CJI3X C1, A1 5.9 Brain Brain - Hypothalamus 0001898 594 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99144 758292 0.967447 0.993159 0.838248 23711 1 76 0.00220029 371 0 8.81230e+07 0.0323432 5.69571e+06 8.87301e+07 5.38072e+06 23734 4.38459e+07 0 0.1292 0.993159 0.832513 8.81230e+07 0.00295452 1.91589e+07 1.88747e+07 1.96795e+07 357 1.95876e+07 8.46939e+06 0.00257675 1.93677e+07 49.7177 0.0641914 0.994877 0 50.6702 GTEX-1I1CD-0011-R9a-SM-CMKHB C1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 594 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994632 558712 0.962744 0.995706 0.819833 23003 1 76 0.00220606 389 0 1.16432e+08 0.0370603 6.78698e+06 1.16934e+08 8.41246e+06 23027 5.80509e+07 0 0.14291 0.995706 0.816313 1.16432e+08 0.00285156 2.51754e+07 2.71684e+07 2.62499e+07 371 2.59305e+07 1.14152e+07 0.00252846 2.55874e+07 49.667 0.0580411 0.99678 0 51.0447 GTEX-1I1CD-0126-SM-CM2TK 1 C1 6 pieces; well trimmed, epidermis measures 33 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 680 1434 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99287 232629 0.97295 0.994236 0.792057 24219 1 76 0.00214493 227 0 8.62698e+07 0.0267717 278396 8.67699e+07 5.67411e+06 24255 4.29621e+07 0 0.180893 0.994236 0.787491 8.62698e+07 0.00280612 1.88787e+07 7.75771e+06 1.89459e+07 210 1.89717e+07 1.5243e+07 0.00247507 1.89644e+07 49.9903 0.00320844 0.995601 0 50.0888 GTEX-1I1CD-0226-SM-CM2TL 1 C1 2 pieces 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 681 1433 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992246 237067 0.973502 0.993558 0.763252 24269 1 76 0.00214676 277 0 1.00849e+08 0.0262085 657942 1.01503e+08 6.20771e+06 24316 5.02199e+07 0 0.210251 0.993558 0.758335 1.00849e+08 0.00310108 2.22409e+07 1.01279e+07 2.23634e+07 296 2.23699e+07 1.47791e+07 0.00262329 2.23598e+07 49.9887 0.00648199 0.99487 0 50.1373 GTEX-1I1CD-0426-SM-ADEJ6 1 C1 2 pieces; includes 20% internal/external fat 7.3 Nerve Nerve - Tibial 0001323 685 1430 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981948 592543 0.962003 0.988466 0.724745 26275 1 76 0.00350104 298 0 1.30553e+08 0.0376657 422580 1.32077e+08 1.46017e+07 26342 6.4668e+07 0 0.237259 0.988466 0.716386 1.30553e+08 0.00344887 2.83991e+07 1.33682e+07 2.86413e+07 330 2.90011e+07 1.94628e+07 0.00347512 2.87973e+07 49.8236 0.00319951 0.994985 0 50.2123 GTEX-1I1CD-0526-SM-CL55H 1 C1 2 pieces; well trimmed, intimal thickening/mild plaque 6.3 Blood Vessel Artery - Tibial 0007610 686 1430 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114,LCSET-9513 07/27/2016 TruSeq.v1 RNASEQ 0.968666 992412 0.9711 0.977051 0.789194 23635 1 76 0.00315097 216 0 1.01902e+08 0.0285716 645952 1.04296e+08 1.10644e+07 23672 5.01534e+07 0 0.181907 0.977051 0.771083 1.01902e+08 0.00524752 2.17253e+07 9.50689e+06 2.18383e+07 237 2.21815e+07 1.6925e+07 0.00419025 2.217e+07 49.987 0.00619348 0.985437 0 50.1297 GTEX-1I1CD-0626-SM-CE6SW 1 C1 6 pieces; essentially well trimmed 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 696 1420 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988035 404325 0.974304 0.989549 0.764936 24168 1 76 0.00819965 148 0 7.55965e+07 0.0253549 230489 7.63949e+07 1.30219e+07 24202 3.75917e+07 0 0.209369 0.989549 0.756942 7.55965e+07 0.00775449 1.66689e+07 8.77742e+06 1.67201e+07 143 1.68015e+07 1.25587e+07 0.00797741 1.67003e+07 49.849 0.00301707 0.991063 0 50.0767 GTEX-1I1CD-0926-SM-CL55I 1 C1 2 pieces; emphysematous change 6.6 Lung Lung 0008952 699 1419 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991213 360770 0.964538 0.992563 0.7132 25952 1 76 0.00288574 273 0 1.03493e+08 0.0345762 652652 1.04268e+08 1.12396e+07 26006 5.14858e+07 0 0.251338 0.992563 0.707895 1.03493e+08 0.00428712 2.26563e+07 1.34314e+07 2.2815e+07 269 2.28196e+07 1.35642e+07 0.00358547 2.27849e+07 49.9619 0.00625934 0.993912 0 50.1745 GTEX-1I1CD-1026-SM-COH3G 1 C1 2 pieces; mature fat 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 700 1418 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990718 247296 0.977915 0.992133 0.7735 22989 1 76 0.00370544 170 0 8.26075e+07 0.0217367 806051 8.32625e+07 8.68419e+06 23022 4.11293e+07 0 0.204415 0.992133 0.767414 8.26075e+07 0.00466028 1.82921e+07 9.55913e+06 1.84055e+07 188 1.84167e+07 1.29736e+07 0.00418218 1.83994e+07 49.9766 0.00968084 0.993547 0 50.1545 GTEX-1I1CD-1226-SM-CNPQ2 1 C1 6 pieces; atherosclerosis 6.8 Blood Vessel Artery - Aorta 0001496 703 1416 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983352 277020 0.974441 0.986948 0.744984 23788 1 76 0.00566724 130 0 7.62756e+07 0.0251377 242919 7.72843e+07 1.85295e+07 23822 3.78613e+07 0 0.229457 0.986948 0.73526 7.62756e+07 0.00924198 1.6518e+07 8.60499e+06 1.65309e+07 145 1.66184e+07 1.21796e+07 0.0074481 1.66941e+07 50.1136 0.00314319 0.990543 0 50.0195 GTEX-1I1CD-1326-SM-A9SMM 1 C1 2 pieces; one is ~15% fat, 2nd is ~60% fat/fibrous with scar, suture material, and focal foreign body giant cell reaction (history of CABG), hypertrophy 6.7 Heart Heart - Atrial Appendage 0006631 704 1416 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.990233 319385 0.9716 0.991861 0.751948 23097 1 76 0.0056657 119 0 7.04247e+07 0.0281543 1.50480e+06 7.10025e+07 1.06982e+07 23128 3.50532e+07 0 0.219652 0.991861 0.745828 7.04247e+07 0.00702303 1.52632e+07 7.81084e+06 1.53747e+07 141 1.53981e+07 9.47128e+06 0.00634325 1.5344e+07 49.912 0.0211937 0.99349 0 50.1819 GTEX-1I1CD-1726-SM-A9G3P 1 C1 6 pieces 6.3 Esophagus Esophagus - Mucosa 0006920 709 1413 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98651 152941 0.971955 0.991353 0.814873 21732 1 76 0.00413881 130 0 6.36095e+07 0.0278782 890893 6.41644e+07 5.90688e+06 21746 3.15801e+07 0 0.157082 0.991353 0.807827 6.36095e+07 0.00432714 1.40824e+07 7.19442e+06 1.43359e+07 154 1.43993e+07 8.11107e+06 0.00423128 1.43018e+07 49.8301 0.0138845 0.996196 0 50.4459 GTEX-1I1CD-2026-SM-A8NA4 1 C1 2 pieces; few inclusion glands and focus of calcification 6.4 Ovary Ovary 0000992 713 1410 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984478 352957 0.961421 0.986795 0.664585 25380 1 76 0.011183 143 0 8.89435e+07 0.0383276 194059 9.01337e+07 1.66641e+07 25438 4.41732e+07 0 0.296836 0.986795 0.65581 8.89435e+07 0.01071 1.93857e+07 1.58165e+07 1.95436e+07 141 1.96009e+07 1.39505e+07 0.0109471 1.95439e+07 49.9271 0.00215301 0.989112 0 50.2028 GTEX-1I1CD-2826-SM-A9SL4 1 C1 6 pieces; target muscularis 6.5 Colon Colon - Sigmoid 0001159 724 1403 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989832 281814 0.976539 0.991503 0.8243 22095 1 76 0.0064792 165 0 8.43019e+07 0.0232088 543435 8.50244e+07 1.49499e+07 22111 4.19724e+07 0 0.152239 0.991503 0.817296 8.43019e+07 0.00814187 1.81602e+07 8.18566e+06 1.83358e+07 169 1.83245e+07 1.45932e+07 0.00730913 1.83072e+07 49.9764 0.00639152 0.993174 0 50.2407 GTEX-1I1CD-2926-SM-A96SJ 1 C1 4 pieces; purkinje cells present, mild to moderate autolysis 7.5 Brain Brain - Cerebellum 0002037 728 1400 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991444 417675 0.949078 0.992845 0.723152 23792 1 76 0.00226563 270 0 9.54704e+07 0.0505564 1.12088e+06 9.61584e+07 3.40432e+06 23828 4.75499e+07 0 0.225926 0.992845 0.717978 9.54704e+07 0.0025837 2.07186e+07 1.22224e+07 2.08331e+07 258 2.08561e+07 1.17504e+07 0.00242444 2.0812e+07 49.9471 0.0116565 0.994246 0 50.1378 GTEX-1I1CD-3026-SM-B2LY2 1 C1 4 pieces; mild to moderate autolysis 6.9 Brain Brain - Cortex 0001870 729 1399 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991158 888182 0.957419 0.993297 0.828222 23090 1 76 0.00245577 158 0 6.94007e+07 0.042164 2.11477e+06 6.9869e+07 2.96688e+06 23105 3.45127e+07 0 0.129196 0.993297 0.822671 6.94007e+07 0.00361875 1.5055e+07 1.56027e+07 1.53248e+07 196 1.53235e+07 8.73026e+06 0.00303601 1.5188e+07 49.7779 0.0302677 0.995437 0 50.4439 GTEX-1I1CD-3126-SM-A8NA3 1 C1 2 pieces; 1 piece is adenohypophysis, 2nd is fragments of dura and neurohypophysis 6.5 Pituitary Pituitary 0000007 730 1398 BP-65829 RNA Extraction from Paxgene-derived Lysate Plate Based 07/30/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984304 507791 0.944769 0.987111 0.714107 25644 1 76 0.0109576 132 0 8.32044e+07 0.0550295 790191 8.42908e+07 1.56907e+07 25686 4.13202e+07 0 0.230661 0.987111 0.704903 8.32044e+07 0.011233 1.70229e+07 2.23248e+07 1.73804e+07 151 1.74415e+07 1.02897e+07 0.0110949 1.71903e+07 49.6373 0.00937458 0.989918 0 50.5196 GTEX-1I1GP-0006-SM-A96RJ C1 8 Blood Whole Blood 0013756 1051 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990155 399954 0.977942 0.991662 0.762803 18982 1 76 0.00215845 137 0 7.6388e+07 0.0215237 227492 7.70303e+07 2.42118e+06 18995 3.80384e+07 0 0.215139 0.991662 0.756442 7.6388e+07 0.00278609 1.74833e+07 5.15485e+07 1.76199e+07 147 1.76562e+07 1.59777e+07 0.00247179 1.75677e+07 49.8743 0.00295328 0.993168 0 50.1945 GTEX-1I1GP-0008-SM-EXUT6 C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 1344 BP-59924 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.994047 612015 0.981898 0.99467 0.861353 20169 1 76 0.00136309 182 0 8.11434e+07 0.0177831 201189 8.15782e+07 2.08141e+06 20187 4.04422e+07 0 0.120545 0.99467 0.856763 8.11434e+07 0.00177822 1.82474e+07 7.5186e+06 1.84195e+07 180 1.84497e+07 2.1123e+07 0.00157052 1.82695e+07 49.7546 0.00246621 0.995293 0 50.2347 GTEX-1I1GP-0126-SM-CYPSG 0 C1 2 pieces, no significant adherent fat' moderate interstitial fat 7.9 Nerve Nerve - Tibial 0001323 1297 1028 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994819 480944 0.965032 0.995457 0.794661 23890 1 76 0.00221784 219 0 8.54321e+07 0.0345397 234707 8.5822e+07 5.60429e+06 23922 4.25925e+07 0 0.170372 0.995457 0.79105 8.54321e+07 0.00265205 1.87124e+07 1.24203e+07 1.8841e+07 208 1.88351e+07 1.5486e+07 0.0024348 1.87803e+07 49.9271 0.00273481 0.996095 0 50.1712 GTEX-1I1GP-0226-SM-CYPSC 0 C1 2 pieces, ~3x3mm nubbin aderent fibroadipose elements, one section, delineated 6.9 Blood Vessel Artery - Tibial 0007610 1300 1026 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994926 242655 0.973158 0.995638 0.810011 21694 1 76 0.00211734 202 0 8.24145e+07 0.0265055 406307 8.27755e+07 5.71091e+06 21719 4.10944e+07 0 0.163147 0.995638 0.806478 8.24145e+07 0.00264199 1.77143e+07 7.38325e+06 1.78884e+07 208 1.78217e+07 1.40777e+07 0.00237948 1.78402e+07 50.0259 0.00490854 0.996351 0 50.2446 GTEX-1I1GP-0326-SM-CNPQ4 1 C1 2 pieces, no abnormalities 7.4 Thyroid Thyroid 0002046 1302 1024 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98646 333979 0.971309 0.989171 0.763432 25527 1 76 0.00538682 211 0 1.10568e+08 0.0283612 281300 1.11779e+08 2.50611e+07 25569 5.49811e+07 0 0.207877 0.989171 0.755165 1.10568e+08 0.00823944 2.42844e+07 1.31961e+07 2.44334e+07 246 2.45387e+07 1.91522e+07 0.00680922 2.44675e+07 49.9274 0.00251658 0.991881 0 50.153 GTEX-1I1GP-0326-SM-DKTR8 1 C1 2 pieces, no abnormalities Thyroid Thyroid 0002046 1302 1024 BP-73727 DNA Extraction from Paxgene-derived Lysate Plate Based 04/13/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GP-0426-SM-COH3N 0 C1 2 pieces, fibroadipose elements only 6.4 Breast Breast - Mammary Tissue 0008367 1304 1022 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99267 270193 0.976787 0.993881 0.807024 21945 1 76 0.00349318 164 0 7.53766e+07 0.0229416 743721 7.58407e+07 7.51942e+06 21962 3.75542e+07 0 0.169763 0.993881 0.802085 7.53766e+07 0.00424059 1.65923e+07 9.06049e+06 1.67304e+07 194 1.67114e+07 1.07968e+07 0.00386643 1.67011e+07 49.9846 0.00980636 0.995091 0 50.2072 GTEX-1I1GP-0526-SM-ARL7G 1 C1 2 pieces, advanced fibrosing chronic pneumonitis, involves ~30% of tissue (delineated) 6.8 Lung Lung 0008952 1306 1021 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.989954 404123 0.970243 0.989633 0.733067 22633 1 76 0.00224133 114 0 5.3211e+07 0.0292805 101180 5.37684e+07 4.49236e+06 22661 2.64358e+07 0 0.237176 0.989633 0.725468 5.3211e+07 0.00268387 1.16932e+07 4.77771e+06 1.17672e+07 119 1.19525e+07 8.75808e+06 0.00246267 1.14958e+07 49.0262 0.00188177 0.989312 0 50.1576 GTEX-1I1GP-0626-SM-ARL7H 1 C1 2 pieces, no abnormalities 7.5 Heart Heart - Atrial Appendage 0006631 1307 1020 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.993159 620359 0.97054 0.993117 0.798648 21155 1 76 0.00164649 118 0 6.02606e+07 0.029207 899185 6.06783e+07 4.95597e+06 21172 2.99607e+07 0 0.171892 0.993117 0.79315 6.02606e+07 0.00208693 1.29469e+07 8.9123e+06 1.29264e+07 141 1.31715e+07 1.04044e+07 0.00186672 1.27016e+07 49.0918 0.0148189 0.993074 0 49.9603 GTEX-1I1GP-0726-SM-B2LVP 1 C1 1 piece. ~60% occlusive calcifying atherosis, delineated 5.8 Blood Vessel Artery - Coronary 0001621 1310 1020 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.988544 154924 0.968551 0.989916 0.725581 22267 1 76 0.0027947 133 0 6.37243e+07 0.0311776 478144 6.43735e+07 3.45968e+06 22296 3.16908e+07 0 0.24297 0.989916 0.718264 6.37243e+07 0.0038485 1.38344e+07 5.5372e+06 1.39934e+07 148 1.39732e+07 9.01873e+06 0.00332087 1.39413e+07 49.9429 0.00742766 0.991287 0 50.2857 GTEX-1I1GP-0826-SM-A96SD 1 C1 2 pieces, marked chronic ischemic changes/interstitial fibrosis, remote micro-infarcts present (rep delineated) 5.7 Heart Heart - Left Ventricle 0006566 1311 1020 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.994165 141120 0.987936 0.995546 0.86243 17816 1 76 0.00153609 366 0 7.88395e+07 0.012 5.33019e+06 7.91922e+07 2.58681e+06 17820 3.93123e+07 0 0.125505 0.995546 0.85859 7.88395e+07 0.0019166 1.72926e+07 2.6873e+07 1.78704e+07 337 1.77082e+07 3.53024e+06 0.00172608 1.75177e+07 49.7297 0.067307 0.996928 0 50.8216 GTEX-1I1GP-0926-SM-COH3O 1 C1 6 pieces, atherosis up to ~0.6mm 7.5 Blood Vessel Artery - Aorta 0001496 1313 1018 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990297 308959 0.969193 0.991925 0.728704 22967 1 76 0.0037341 144 0 7.85544e+07 0.0304898 159280 7.91939e+07 8.36174e+06 23007 3.90869e+07 0 0.240488 0.991925 0.72282 7.85544e+07 0.00475549 1.69437e+07 7.64571e+06 1.70044e+07 160 1.70192e+07 1.23868e+07 0.00424396 1.70573e+07 50.0559 0.00201127 0.993552 0 50.0893 GTEX-1I1GP-1026-SM-C1YRZ 2 C1 6 pieces, squamous mucosa up to ~0.2mm, partially sloughing. Submucosa mucus glands abundant, rep. delineated 6.2 Esophagus Esophagus - Mucosa 0006920 1314 1018 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988522 366899 0.972127 0.990936 0.755857 23832 1 76 0.00196401 206 0 8.97799e+07 0.0276281 275863 9.06011e+07 4.45574e+06 23867 4.46594e+07 0 0.21627 0.990936 0.749006 8.97799e+07 0.00240868 1.99209e+07 8.97252e+06 2.00591e+07 219 2.00696e+07 1.40264e+07 0.0021858 2.01182e+07 50.0605 0.00304481 0.99335 0 50.1729 GTEX-1I1GP-1126-SM-ARL7I 1 C1 6 pieces, confirmed target muscularis. Incidental ~1.5mm mucus gland, delineated 7.1 Esophagus Esophagus - Muscularis 0004648 1315 1017 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990745 662276 0.973914 0.990924 0.753787 21532 1 76 0.00198017 122 0 5.64004e+07 0.0258094 431708 5.69169e+07 4.36071e+06 21554 2.80088e+07 0 0.220126 0.990924 0.746946 5.64004e+07 0.00250219 1.22924e+07 5.74416e+06 1.23298e+07 130 1.26007e+07 8.79226e+06 0.00224113 1.20326e+07 48.8468 0.00758488 0.991102 0 50.0758 GTEX-1I1GP-1226-SM-A96SC 1 C1 6 pieces, confirmed target muscularis, Myenteric nerve (ganglion) plexus unusually prominent, rep. focus delineated 6.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 1317 1015 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991775 209429 0.97353 0.993184 0.79179 22089 1 76 0.00195746 203 0 7.52509e+07 0.0262329 845470 7.57673e+07 2.62623e+06 22118 3.74941e+07 0 0.18174 0.993184 0.786394 7.52509e+07 0.00238424 1.62412e+07 6.23318e+06 1.64156e+07 206 1.64108e+07 1.12607e+07 0.00217055 1.63492e+07 49.9059 0.0111588 0.994594 0 50.267 GTEX-1I1GP-1326-SM-A9G28 0 C1 6 pieces, moderately abundant dermal fat up to ~2mm, rep delineated. Squamous epithelium is ~30-40 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1319 1015 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985865 174882 0.974394 0.991113 0.794377 23662 1 76 0.00367298 148 0 7.42664e+07 0.0253537 492034 7.49323e+07 6.48531e+06 23691 3.68568e+07 0 0.180018 0.991113 0.787317 7.42664e+07 0.00433533 1.62523e+07 9.32188e+06 1.64633e+07 157 1.65887e+07 1.27151e+07 0.00399808 1.64849e+07 49.8431 0.00656638 0.996361 0 50.3225 GTEX-1I1GP-1426-SM-ACKVZ 1 C1 2 pieces, only trace fascia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1329 1005 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992248 311312 0.975843 0.993811 0.811661 23549 1 76 0.00270807 272 0 1.10417e+08 0.0238762 1.48563e+06 1.11105e+08 1.36368e+07 23571 5.50014e+07 0 0.164182 0.993811 0.806637 1.10417e+08 0.00383987 2.42258e+07 1.81121e+07 2.4466e+07 326 2.44531e+07 1.49233e+07 0.00327308 2.43959e+07 49.9414 0.0133714 0.995375 0 50.2466 GTEX-1I1GP-1826-SM-C1YS1 2 C1 2 pieces, cortex. Adherent fat is ~20% of specimen, delineated 5.9 Adrenal Gland Adrenal Gland 0002369 1336 1000 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989911 523553 0.964255 0.992598 0.800671 21389 1 76 0.0017249 269 0 8.44144e+07 0.0355529 5.83724e+06 8.50439e+07 3.61274e+06 21418 4.19962e+07 0 0.163584 0.992598 0.794744 8.44144e+07 0.00235787 1.8276e+07 1.8855e+07 1.87108e+07 305 1.86637e+07 9.15593e+06 0.00204053 1.85281e+07 49.8178 0.0686379 0.995285 0 50.5877 GTEX-1I1GP-1926-SM-CNNQU 1 C1 6 pieces, glomeruli present; tubules variably but reasonably well preserved 5.7 Kidney Kidney - Cortex 0001225 1338 999 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992813 685824 0.958025 0.994749 0.823373 23480 1 76 0.00201331 369 0 1.27513e+08 0.0418074 1.66848e+07 1.28186e+08 1.19332e+07 23505 6.35419e+07 0 0.134652 0.994749 0.819049 1.27513e+08 0.00330382 2.76293e+07 5.56824e+07 2.83998e+07 351 2.82636e+07 9.67739e+06 0.00265731 2.7975e+07 49.7434 0.130161 0.996684 0 50.6876 GTEX-1I1GP-2026-SM-CE6SZ 1 C1 2 pieces, mainly stroma; glandular elements variably preserved, some with urothelial metaplasia, rep delineated 6.6 Prostate Prostate 0002367 1340 998 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988112 517648 0.949117 0.989488 0.754289 23484 1 76 0.00788462 130 0 6.86475e+07 0.0506568 442221 6.93768e+07 1.1467e+07 23512 3.41503e+07 0 0.194829 0.989488 0.74636 6.86475e+07 0.00770962 1.47466e+07 2.42403e+07 1.49734e+07 134 1.49948e+07 1.07523e+07 0.00779724 1.48336e+07 49.7298 0.00637419 0.990865 0 50.3816 GTEX-1I1GP-2126-SM-CKZPJ 0 C1 2 pieces, ~10-15% interstitial fat 8.5 Muscle Muscle - Skeletal 0011907 1341 997 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.993405 359098 0.983163 0.995213 0.875274 20549 1 76 0.00162924 270 0 1.06966e+08 0.0165864 713500 1.0748e+08 1.05401e+07 20560 5.33041e+07 0 0.107889 0.995213 0.871084 1.06966e+08 0.00263336 2.27923e+07 1.13851e+07 2.3077e+07 309 2.31616e+07 2.30984e+07 0.00213039 2.28719e+07 49.6853 0.00663843 0.99702 0 50.3103 GTEX-1I1GP-2226-SM-CGQFK 0 C1 6 pieces, focal adherent fat, nubbins up to ~1mm, rep delineated. Squamous epithelium is ~35-40 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 1343 996 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991625 492975 0.96922 0.993329 0.757856 27184 1 76 0.0037969 473 0 1.63853e+08 0.0305669 1.26986e+06 1.64953e+08 1.22037e+07 27254 8.16021e+07 0 0.211364 0.993329 0.7528 1.63853e+08 0.00369942 3.60038e+07 1.92434e+07 3.62999e+07 424 3.6267e+07 2.30643e+07 0.00375084 3.62625e+07 49.9969 0.0076983 0.995033 0 50.2048 GTEX-1I1GP-2326-SM-CGQFL 0 C1 2 pieces, fascia up to ~10% of specimen 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 1345 994 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992565 430578 0.973789 0.99429 0.808995 25526 1 76 0.00364939 381 0 1.46538e+08 0.0258805 1.38235e+06 1.4738e+08 1.05048e+07 25576 7.2992e+07 0 0.164794 0.99429 0.804375 1.46538e+08 0.00380801 3.22872e+07 1.51986e+07 3.24878e+07 405 3.24873e+07 2.13882e+07 0.00372433 3.2485e+07 49.9983 0.00937947 0.996014 0 50.1548 GTEX-1I1GP-2426-SM-B2LXK 1 C1 2 pieces, prominent interstitial fibrosis; spermatogenesis appears reduced 6.5 Testis Testis 0000473 1346 994 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989019 596071 0.933987 0.990976 0.70736 32448 1 76 0.00239884 150 0 7.53816e+07 0.0657597 913651 7.6068e+07 2.9337e+06 32509 3.749e+07 0 0.226628 0.990976 0.700977 7.53816e+07 0.00370752 1.59921e+07 1.0061e+07 1.60437e+07 156 1.61283e+07 1.10474e+07 0.00305189 1.60322e+07 49.8506 0.012011 0.992933 0 50.0805 GTEX-1I1GP-2826-SM-A9SKZ 1 C1 6 pieces, confirmed target muscularis 7.3 Colon Colon - Sigmoid 0001159 1354 990 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.991551 423425 0.970935 0.993089 0.809629 23451 1 76 0.00444778 205 0 8.94922e+07 0.0288055 759047 9.0115e+07 1.32896e+07 23478 4.45624e+07 0 0.161305 0.993089 0.804034 8.94922e+07 0.00550289 1.93576e+07 1.03314e+07 1.94663e+07 209 1.94625e+07 1.43537e+07 0.00497452 1.94936e+07 50.0399 0.0084231 0.994626 0 50.1399 GTEX-1I1GP-3126-SM-C1YS2 1 C1 1 piece, mainly adenohypophysis; ~4x1.5mm nubbin of neurohypophysis delineated 6.6 Pituitary Pituitary 0000007 1360 985 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988314 1.26851e+06 0.949209 0.991079 0.739459 25744 1 76 0.00188515 272 0 1.01219e+08 0.0505666 832916 1.02131e+08 4.88286e+06 25796 5.03336e+07 0 0.20975 0.991079 0.732862 1.01219e+08 0.00230892 2.09535e+07 2.4932e+07 2.12306e+07 311 2.13005e+07 1.41859e+07 0.00209645 2.11356e+07 49.8057 0.00815541 0.993844 0 50.3284 GTEX-1I1GQ-0002-SM-AG5YY C1 Blood Whole Blood 0013756 968 BP-58680 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/08/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GQ-0005-SM-ARU6O C1 9.1 Blood Whole Blood 0013756 968 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.985564 391330 0.978393 0.986814 0.80447 19585 1 76 0.00190817 127 0 8.37043e+07 0.0211051 284010 8.48228e+07 2.69005e+06 19597 4.16873e+07 0 0.173923 0.986814 0.793862 8.37043e+07 0.00281971 1.94146e+07 8.93803e+07 1.94906e+07 151 1.955e+07 2.05956e+07 0.00236337 1.94666e+07 49.8931 0.00334827 0.988063 0 50.0977 GTEX-1I1GQ-0011-R11b-SM-CKZPA C1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 1015 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991412 603370 0.956147 0.993531 0.781585 24712 1 76 0.00201464 275 0 1.26617e+08 0.0434141 1.89082e+06 1.27441e+08 1.14273e+07 24751 6.30206e+07 0 0.174563 0.993531 0.776529 1.26617e+08 0.00329326 2.75234e+07 1.39524e+07 2.76046e+07 324 2.77573e+07 1.70277e+07 0.00265258 2.76038e+07 49.8614 0.0148368 0.995651 0 50.0737 GTEX-1I1GQ-0011-R1a-SM-CY8GG C1, A1 6.1 Brain Brain - Hippocampus 0001954 1015 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989453 633594 0.965713 0.991453 0.822408 25744 1 76 0.00458839 273 0 1.14663e+08 0.0339311 5.69544e+06 1.15651e+08 1.37885e+07 25778 5.70674e+07 0 0.143304 0.991453 0.815379 1.14663e+08 0.00684459 2.5188e+07 1.90322e+07 2.5544e+07 323 2.55407e+07 1.30735e+07 0.00571421 2.53844e+07 49.8466 0.0492467 0.993452 0 50.3509 GTEX-1I1GQ-0011-R5a-SM-CMKHJ C1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1015 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994817 545100 0.966861 0.995784 0.839489 24620 1 76 0.00195152 375 0 1.3035e+08 0.0328473 7.61174e+06 1.30902e+08 1.01885e+07 24646 6.49953e+07 0 0.127373 0.995784 0.835949 1.3035e+08 0.00231473 2.8154e+07 3.06864e+07 2.8967e+07 347 2.90258e+07 1.4156e+07 0.00213295 2.821e+07 49.2874 0.0581483 0.99675 0 50.7116 GTEX-1I1GQ-0011-R6b-SM-CE6SE C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1015 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.989612 553027 0.965871 0.992121 0.840206 23293 1 76 0.00494933 198 0 7.57153e+07 0.0338471 4.84477e+06 7.63166e+07 1.1702e+07 23313 3.76509e+07 0 0.125665 0.992121 0.833585 7.57153e+07 0.00599396 1.66261e+07 1.51328e+07 1.67592e+07 223 1.68059e+07 7.81033e+06 0.00547033 1.67439e+07 49.9075 0.0634825 0.99463 0 50.1992 GTEX-1I1GQ-0011-R7a-SM-CJI41 C1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1015 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992347 1.16784e+06 0.962951 0.993727 0.829174 24407 1 76 0.00178097 376 0 1.26388e+08 0.0367868 7.27949e+06 1.27186e+08 7.7142e+06 24435 6.29492e+07 0 0.133776 0.993727 0.823973 1.26388e+08 0.00236732 2.73566e+07 3.68336e+07 2.78797e+07 358 2.79345e+07 1.29454e+07 0.00207374 2.74427e+07 49.556 0.0572352 0.995107 0 50.4735 GTEX-1I1GQ-0011-R8a-SM-C1YRS C1, A1 7.2 Brain Brain - Hypothalamus 0001898 1015 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990464 808834 0.956221 0.993151 0.815134 25293 1 76 0.00177311 373 0 9.59436e+07 0.0433895 2.47963e+06 9.66053e+07 4.32943e+06 25323 4.77228e+07 0 0.141087 0.993151 0.809551 9.59436e+07 0.00236468 2.08911e+07 1.49873e+07 2.10792e+07 345 2.11242e+07 1.25248e+07 0.0020681 2.1081e+07 49.9488 0.0256676 0.995837 0 50.2241 GTEX-1I1GQ-0126-SM-COH3H 1 C1 6 pieces; ~10% internal/external fat; ~39 micron thick epidermis 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1068 1306 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992069 365877 0.966572 0.993328 0.769513 24976 1 76 0.00352242 271 0 1.01599e+08 0.0331561 303431 1.02281e+08 1.08564e+07 25018 5.06148e+07 0 0.197059 0.993328 0.764379 1.01599e+08 0.00426596 2.18846e+07 1.19448e+07 2.18909e+07 243 2.1914e+07 1.74934e+07 0.00389372 2.19857e+07 50.0816 0.00296663 0.994586 0 50.0072 GTEX-1I1GQ-0226-SM-COH3I 1 C1 2 pieces; mature adipose tissue and fibrovascular component (~5%) 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 1070 1305 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.989485 286208 0.974815 0.990961 0.844519 22710 1 76 0.00341639 151 0 6.95555e+07 0.0248268 474520 7.019e+07 7.35064e+06 22730 3.46317e+07 0 0.130296 0.990961 0.836885 6.95555e+07 0.00453245 1.53022e+07 7.55114e+06 1.53741e+07 165 1.53733e+07 1.32243e+07 0.00397359 1.54048e+07 50.0511 0.00676051 0.992436 0 50.1171 GTEX-1I1GQ-0326-SM-A9SKS 1 C1 2 pieces; target skeletal muscle fibers 8.7 Muscle Muscle - Skeletal 0011907 1072 1303 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990845 426955 0.982677 0.992074 0.868994 22246 1 76 0.00632167 272 0 1.32466e+08 0.0169822 1.19915e+06 1.33524e+08 2.50525e+07 22256 6.60097e+07 0 0.113683 0.992074 0.862106 1.32466e+08 0.00728591 2.82589e+07 1.93388e+07 2.86306e+07 298 2.86043e+07 2.85567e+07 0.0068032 2.84072e+07 49.8272 0.00898075 0.993303 0 50.3267 GTEX-1I1GQ-0426-SM-ACKVR 1 C1 2 pieces; ~5% internal fat and trace of external fat; mild focal lymphocytic infiltrate in perineural tissue (outlined) 7.7 Nerve Nerve - Tibial 0001323 1073 1303 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992183 258423 0.963658 0.993444 0.745884 25545 1 76 0.00287864 287 0 1.00658e+08 0.0359796 298954 1.01322e+08 1.3497e+07 25593 5.01383e+07 0 0.217774 0.993444 0.740994 1.00658e+08 0.00343834 2.20207e+07 1.06242e+07 2.22154e+07 263 2.22296e+07 1.57664e+07 0.00315813 2.21275e+07 49.885 0.00295053 0.994706 0 50.22 GTEX-1I1GQ-0526-SM-ARL7W 1 C1 2 pieces; patent lumen; up to 0.3 mm adventitia; 8.3 Blood Vessel Artery - Tibial 0007610 1074 1302 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.994594 660369 0.969236 0.994465 0.782527 22849 1 76 0.001747 164 0 7.40797e+07 0.0303755 282937 7.4492e+07 3.34457e+06 22878 3.68696e+07 0 0.186709 0.994465 0.778196 7.40797e+07 0.0021799 1.59507e+07 6.38384e+06 1.58964e+07 166 1.60469e+07 1.33925e+07 0.00196348 1.57941e+07 49.6029 0.00379822 0.994335 0 49.9148 GTEX-1I1GQ-0726-SM-ARZM4 1 C1 2 pieces; mature adipose tissue with fibrovascular component; no ductal structures observed 6.6 Breast Breast - Mammary Tissue 0008367 1098 1280 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 EXCLUDE 0.987069 307349 0.974827 0.989184 0.849741 21924 1 76 0.00221807 165 0 7.35888e+07 0.0249361 1.39688e+06 7.43935e+07 3.24322e+06 21945 3.6572e+07 0 0.125086 0.989184 0.84055 7.35888e+07 0.00342275 1.6e+07 1.3856e+07 1.64873e+07 202 1.66019e+07 1.20135e+07 0.00281912 1.60216e+07 49.1106 0.018777 0.991298 0 50.75 GTEX-1I1GQ-0826-SM-CNNQR 1 C1 2 pieces; interstitial fibrosis with nodularity; rare lymphocytic aggregates (outlined); congestion 6.2 Thyroid Thyroid 0002046 1101 1277 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990448 207300 0.965058 0.992722 0.747077 25501 1 76 0.00243957 205 0 8.63589e+07 0.0345164 539041 8.6992e+07 8.86059e+06 25548 4.29837e+07 0 0.217981 0.992722 0.74164 8.63589e+07 0.00375792 1.88788e+07 1.04715e+07 1.90244e+07 221 1.90708e+07 1.20119e+07 0.00309724 1.90127e+07 49.9238 0.00619644 0.994997 0 50.192 GTEX-1I1GQ-1026-SM-CNNQS 1 C1 2 pieces; lobulated mature adipose tissue with marlkedly congested fibrovascular component; sparse small lymphocytic aggregates (outlined) 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1105 1275 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990723 222514 0.972563 0.993226 0.818622 24394 1 76 0.00225951 173 0 8.00808e+07 0.0270424 708077 8.06269e+07 8.16264e+06 24423 3.98494e+07 0 0.153941 0.993226 0.813076 8.00808e+07 0.00381816 1.76379e+07 9.19792e+06 1.77482e+07 200 1.77855e+07 1.42158e+07 0.00303687 1.77893e+07 50.0055 0.00878214 0.99573 0 50.1558 GTEX-1I1GQ-1126-SM-CNNQT 1 C1 2 pieces; marked chronic passive congestion; emphysematous changes ; bronchioles (outlined); small fragment of cartilage (arrow); a few scattered small lymphocytic aggregates; fragment of bronchiole and mucous (squared) 7.3 Lung Lung 0008952 1106 1274 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990781 267917 0.971601 0.992957 0.761386 25034 1 76 0.00249877 276 0 1.16448e+08 0.0277635 430885 1.17274e+08 1.17354e+07 25076 5.79519e+07 0 0.210216 0.992957 0.756023 1.16448e+08 0.00393533 2.57583e+07 1.23993e+07 2.59886e+07 322 2.60021e+07 1.73257e+07 0.00321548 2.59796e+07 49.9784 0.00367418 0.995132 0 50.2226 GTEX-1I1GQ-1226-SM-CL55J 1 C1 2 pieces; fibromuscular and adipose tissue; marked congestion with stasis 7.2 Heart Heart - Atrial Appendage 0006631 1108 1273 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991871 525335 0.975324 0.993711 0.810547 23785 1 76 0.00245438 369 0 1.03852e+08 0.0242196 2.70528e+06 1.04509e+08 1.30958e+07 23816 5.16821e+07 0 0.164777 0.993711 0.805449 1.03852e+08 0.00385227 2.24389e+07 1.3974e+07 2.29967e+07 360 2.31203e+07 1.37192e+07 0.00315203 2.24837e+07 49.3021 0.0258855 0.995552 0 50.6138 GTEX-1I1GQ-1326-SM-CM2TM 1 C1 2 pieces; interrupted vessel wall with fibrosclerotic plaque (arrows); up to 0.8 mm attached adventitia 6.6 Blood Vessel Artery - Coronary 0001621 1112 1269 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992548 411171 0.965503 0.993755 0.745992 24482 1 76 0.00224121 277 0 1.07278e+08 0.0341102 251300 1.07953e+08 6.46184e+06 24523 5.34025e+07 0 0.219511 0.993755 0.741334 1.07278e+08 0.00290467 2.29122e+07 1.05518e+07 2.30011e+07 294 2.30258e+07 1.78539e+07 0.00257254 2.30194e+07 49.9931 0.00232787 0.994963 0 50.0969 GTEX-1I1GQ-1426-SM-B2LWY 1 C1 2 pieces; interstitial fibrosis with scarring (rep arrowed) 6.3 Heart Heart - Left Ventricle 0006566 1113 1269 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992311 515538 0.980596 0.994139 0.83656 22030 1 76 0.00209968 264 0 8.80503e+07 0.0192294 3.14653e+06 8.85694e+07 3.38664e+06 22046 4.38360e+07 0 0.144036 0.994139 0.831656 8.80503e+07 0.00343063 1.95248e+07 1.18481e+07 1.97588e+07 300 1.99262e+07 1.17862e+07 0.00276393 1.94994e+07 49.4587 0.0355262 0.995966 0 50.2979 GTEX-1I1GQ-1526-SM-ACKVQ 1 C1 6 pieces; dissecting atherosclerotic plaque (arrows); up to 0.6mm attached adventitia 7.1 Blood Vessel Artery - Aorta 0001496 1115 1268 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991035 244259 0.968992 0.992428 0.725355 23948 1 76 0.00310506 209 0 9.38121e+07 0.0306228 268294 9.45279e+07 1.20025e+07 23990 4.66906e+07 0 0.243636 0.992428 0.719863 9.38121e+07 0.00369932 2.0209e+07 8.81696e+06 2.03939e+07 237 2.04166e+07 1.48236e+07 0.00340177 2.03099e+07 49.869 0.00283825 0.993821 0 50.2277 GTEX-1I1GQ-1626-SM-A9SKR 1 C1 6 pieces; well trimmed target muscularis 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1117 1267 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989094 254151 0.962891 0.990726 0.769746 23349 1 76 0.00662435 132 0 7.17924e+07 0.0369503 1.36525e+06 7.24645e+07 1.29127e+07 23376 3.5727e+07 0 0.193145 0.990726 0.762608 7.17924e+07 0.00819416 1.54456e+07 8.17346e+06 1.5673e+07 154 1.56341e+07 8.10389e+06 0.00740796 1.55959e+07 49.9389 0.0188403 0.992358 0 50.3653 GTEX-1I1GQ-1726-SM-B2LWZ 1 C1 6 pieces; congested mucosa; ~0.3mm thick squamous epithelium 6.4 Esophagus Esophagus - Mucosa 0006920 1118 1266 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992449 484588 0.972214 0.994133 0.779471 22973 1 76 0.00237837 153 0 7.5464e+07 0.0275199 529260 7.59094e+07 3.01333e+06 22992 3.75695e+07 0 0.192743 0.994133 0.774897 7.5464e+07 0.00384202 1.68135e+07 8.49234e+06 1.69163e+07 173 1.69643e+07 1.24664e+07 0.00310896 1.68903e+07 49.8907 0.00697226 0.995816 0 50.1524 GTEX-1I1GQ-2026-SM-ARU7F 2 C1 2 pieces; moderate to severe autolysis of adrenal cortex; fibrous septa (arrows); trace and 2% of external fat 6.4 Adrenal Gland Adrenal Gland 0002369 1123 1263 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991885 235779 0.969414 0.99332 0.779614 21459 1 76 0.00202721 117 0 5.21241e+07 0.0303656 2.19115e+06 5.24746e+07 1.86497e+06 21475 2.59656e+07 0 0.1898 0.99332 0.774406 5.21241e+07 0.00281302 1.1357e+07 5.83857e+06 1.15278e+07 139 1.15376e+07 6.35863e+06 0.00241955 1.14179e+07 49.7391 0.0417563 0.994755 0 50.373 GTEX-1I1GQ-2226-SM-B2LX1 2 C1 2 pieces; congested thick fibrous septa; interstitial and periductal fibrosis; small sparsely cellular Langerhans islets (rep outlined) 6.2 Pancreas Pancreas 0001150 1126 1261 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990107 453528 0.983518 0.991716 0.869978 20313 1 76 0.00264807 102 0 7.82698e+07 0.0159134 154564 7.89235e+07 3.04291e+06 20326 3.89332e+07 0 0.113539 0.991716 0.862772 7.82698e+07 0.0037751 1.82933e+07 3.11696e+07 1.84763e+07 110 1.85027e+07 2.68006e+07 0.00321067 1.83905e+07 49.8479 0.0019584 0.993326 0 50.2488 GTEX-1I1GQ-2826-SM-A8N82 1 C1 2 pieces; spermatogenesis preserved; congestion 7.3 Testis Testis 0000473 1137 1254 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985735 589862 0.923181 0.987746 0.711382 35649 1 76 0.0105298 288 0 1.31425e+08 0.0764673 1.14145e+06 1.33055e+08 2.20661e+07 35740 6.53423e+07 0 0.211799 0.987746 0.702665 1.31425e+08 0.010536 2.70843e+07 2.34837e+07 2.72482e+07 268 2.73855e+07 2.10602e+07 0.0105329 2.7185e+07 49.8163 0.00857875 0.989756 0 50.1509 GTEX-1I1GQ-2926-SM-A8N83 1 C1 4 pieces; mild to moderate autolysis; Purkinjie cells present 7.5 Brain Brain - Cerebellum 0002037 1141 1251 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986193 492328 0.947082 0.98828 0.720783 25739 1 76 0.0107905 199 0 1.06027e+08 0.052535 1.46299e+06 1.07285e+08 1.84133e+07 25777 5.26951e+07 0 0.226298 0.98828 0.712335 1.06027e+08 0.0108203 2.28512e+07 2.18514e+07 2.30779e+07 251 2.31576e+07 1.27766e+07 0.0108054 2.29793e+07 49.8068 0.0136366 0.990367 0 50.2467 GTEX-1I1GQ-3026-SM-CL55K 1 C1 4 pieces; mild to moderate autolysis 6.1 Brain Brain - Cortex 0001870 1143 1249 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991385 426703 0.96807 0.993336 0.839185 24052 1 76 0.00227278 368 0 9.55462e+07 0.0316413 5.79794e+06 9.61871e+07 1.18959e+07 24071 4.756e+07 0 0.128884 0.993336 0.833593 9.55462e+07 0.00403292 2.08559e+07 1.86514e+07 2.14055e+07 383 2.13491e+07 9.01384e+06 0.00315112 2.10672e+07 49.6677 0.0602777 0.995288 0 50.6502 GTEX-1I1GQ-3126-SM-CGQF7 2 C1 1 piece; adenohypophysis (80%) and neurohypophysis (20%); marked congestion 6.7 Pituitary Pituitary 0000007 1144 1249 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.986588 612288 0.958373 0.988164 0.749794 28644 1 76 0.00375791 375 0 1.54085e+08 0.0414131 1.00578e+06 1.5593e+08 1.11677e+07 28720 7.67422e+07 0 0.208578 0.988164 0.74092 1.54085e+08 0.00367395 3.21151e+07 2.34332e+07 3.23572e+07 401 3.23412e+07 1.96423e+07 0.00371823 3.23432e+07 50.0016 0.00645016 0.989741 0 50.1878 GTEX-1I1GR-0002-SM-AG5YZ C1 Blood Whole Blood 0013756 601 BP-58680 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/08/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GR-0006-SM-ARL75 C1 8.4 Blood Whole Blood 0013756 601 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.944335 629902 0.971455 0.945242 0.785249 16946 1 76 0.00184863 83 0 6.99423e+07 0.0279332 201105 7.39941e+07 3.06573e+06 16955 3.46592e+07 0 0.186207 0.945242 0.74225 6.99423e+07 0.0026775 1.63504e+07 1.35384e+08 1.66166e+07 105 1.68818e+07 2.06891e+07 0.00226267 1.61729e+07 48.9276 0.00271785 0.946148 0 50.4038 GTEX-1I1GR-0011-R11a-SM-CM2T5 C1, A1 7.4 Brain Brain - Cerebellar Hemisphere 0002037 615 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992487 845351 0.949274 0.993682 0.744223 25212 1 76 0.00227755 376 0 1.36227e+08 0.0501979 1.54606e+06 1.37093e+08 7.98317e+06 25255 6.7824e+07 0 0.20505 0.993682 0.739521 1.36227e+08 0.002791 2.9444e+07 1.8744e+07 2.95455e+07 332 2.96887e+07 1.86533e+07 0.00253396 2.94493e+07 49.7976 0.0112774 0.994877 0 50.0861 GTEX-1I1GR-0011-R3a-SM-CM2T4 C1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 615 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992943 563872 0.962694 0.994642 0.851888 23537 1 76 0.00227368 268 0 8.26149e+07 0.0369692 4.50438e+06 8.30599e+07 5.10103e+06 23553 4.11284e+07 0 0.110806 0.994642 0.847324 8.26149e+07 0.00291427 1.80603e+07 1.40824e+07 1.83415e+07 322 1.83139e+07 8.88505e+06 0.00259343 1.82147e+07 49.8642 0.0542305 0.99634 0 50.3862 GTEX-1I1GR-0011-R4a-SM-CMKHC C1, A1 6.3 Brain Brain - Amygdala 0001876 615 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993895 741213 0.961607 0.995295 0.840008 23613 1 76 0.00248171 374 0 1.09821e+08 0.0381789 1.19056e+07 1.1034e+08 7.91586e+06 23634 5.47173e+07 0 0.1216 0.995295 0.836055 1.09821e+08 0.00340207 2.36737e+07 3.08423e+07 2.46118e+07 404 2.44025e+07 9.60550e+06 0.00294124 2.40144e+07 49.5992 0.107899 0.996694 0 50.9715 GTEX-1I1GR-0011-R5a-SM-CMKHD C1, A1 6.4 Brain Brain - Caudate (basal ganglia) 0001873 615 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993809 636820 0.963154 0.99526 0.837134 23755 1 76 0.00237214 371 0 9.70524e+07 0.0366128 6.27559e+06 9.75146e+07 6.89971e+06 23770 4.8352e+07 0 0.12602 0.99526 0.833166 9.70524e+07 0.0034441 2.0996e+07 2.31327e+07 2.15988e+07 366 2.14822e+07 9.44207e+06 0.00290734 2.12321e+07 49.7072 0.0643553 0.996712 0 50.7075 GTEX-1I1GR-0011-R6a-SM-CMKHI C1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 615 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994638 863164 0.963084 0.995579 0.840681 24900 1 76 0.00222501 374 0 1.39173e+08 0.0365389 8.78321e+06 1.39791e+08 8.55218e+06 24924 6.93835e+07 0 0.122404 0.995579 0.836964 1.39173e+08 0.00302667 3.02844e+07 3.66822e+07 3.07974e+07 361 3.07672e+07 1.63003e+07 0.00262546 3.04374e+07 49.7306 0.0628308 0.996519 0 50.4199 GTEX-1I1GR-0126-SM-CL55F 0 C1 6 pieces, trace dermal fat (rep delineated); squamous epithelium is ~50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 769 972 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991519 496036 0.974016 0.993308 0.787031 25085 1 76 0.00262536 246 0 1.03101e+08 0.0256383 325879 1.03796e+08 1.30084e+07 25125 5.13121e+07 0 0.186985 0.993308 0.781764 1.03101e+08 0.00435254 2.25508e+07 1.14385e+07 2.2618e+07 243 2.26998e+07 1.83227e+07 0.00348739 2.26464e+07 49.9411 0.00313961 0.995096 0 50.0743 GTEX-1I1GR-0226-SM-CMKHQ 0 C1 2 pieces, ~10% fascia/vascular elements, rep delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 772 970 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994271 286865 0.975233 0.995266 0.792656 24195 1 76 0.00232691 278 0 1.03321e+08 0.0244021 634263 1.03812e+08 7.88284e+06 24232 5.15001e+07 0 0.182576 0.995266 0.788904 1.03321e+08 0.00295536 2.26615e+07 1.12002e+07 2.29339e+07 319 2.29424e+07 1.64028e+07 0.00264082 2.27546e+07 49.7945 0.00610972 0.996261 0 50.2987 GTEX-1I1GR-0326-SM-CKZPI 0 C1 2 pieces, ~10% interstitial fat, rep. delineated 7.8 Muscle Muscle - Skeletal 0011907 774 968 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992035 390655 0.982201 0.994425 0.868127 20114 1 76 0.0019451 196 0 8.67362e+07 0.0175899 1.14992e+06 8.72224e+07 8.31176e+06 20127 4.31919e+07 0 0.114074 0.994425 0.863288 8.67362e+07 0.00363553 1.87099e+07 8.389e+06 1.89801e+07 209 1.90483e+07 1.76044e+07 0.00278829 1.88233e+07 49.703 0.0131838 0.996815 0 50.3584 GTEX-1I1GR-0426-SM-CM2TG 0 C1 2 pieces, no adherent fat 6.2 Nerve Nerve - Tibial 0001323 779 963 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.991389 247325 0.958413 0.992986 0.70483 24804 1 76 0.00214368 162 0 7.70397e+07 0.0413649 388410 7.75839e+07 4.82356e+06 24847 3.83431e+07 0 0.253583 0.992986 0.699886 7.70397e+07 0.00324749 1.67984e+07 7.03357e+06 1.68307e+07 172 1.68688e+07 9.76458e+06 0.0026947 1.68766e+07 50.0116 0.00500632 0.994582 0 50.048 GTEX-1I1GR-0526-SM-CGQEP 0 C1 2 pieces, no adherent fat or significant atherosis. One section disrupted. 5.6 Blood Vessel Artery - Tibial 0007610 781 962 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993214 498757 0.968784 0.994823 0.7873 25751 1 76 0.003803 388 0 1.82714e+08 0.030894 918831 1.83665e+08 1.316e+07 25816 9.10248e+07 0 0.181483 0.994823 0.783225 1.82714e+08 0.00371624 3.92532e+07 1.63231e+07 3.94979e+07 398 3.94332e+07 2.89429e+07 0.003762 3.95398e+07 50.0675 0.00500276 0.996432 0 50.1554 GTEX-1I1GR-0726-SM-B2LWL 1 C1 2 pieces, moderate congestion 6.1 Lung Lung 0008952 849 895 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989769 385373 0.967703 0.991414 0.719636 24455 1 76 0.00285012 142 0 7.09577e+07 0.0319943 355490 7.15722e+07 3.32247e+06 24492 3.52855e+07 0 0.248067 0.991414 0.713457 7.09577e+07 0.00418779 1.55593e+07 6.52514e+06 1.56682e+07 157 1.56747e+07 9.68916e+06 0.00351785 1.56645e+07 49.9837 0.00496687 0.993059 0 50.1743 GTEX-1I1GR-1026-SM-A9SLC 1 C1 2 pieces, no abnormalities; ~40% interstitial/epicardial fat 6.6 Heart Heart - Atrial Appendage 0006631 857 889 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989005 263429 0.975849 0.991013 0.813432 21549 1 76 0.00688481 102 0 5.9658e+07 0.0240245 4.22764e+06 6.0199e+07 1.04147e+07 21565 2.96824e+07 0 0.162417 0.991013 0.806122 5.9658e+07 0.00859749 1.30386e+07 1.23779e+07 1.31329e+07 137 1.30843e+07 5.32522e+06 0.00773942 1.31691e+07 50.1616 0.0702276 0.99302 0 50.1803 GTEX-1I1GR-1126-SM-A9G2I 1 C1 2 pieces, no abnormalities 6.7 Thyroid Thyroid 0002046 859 887 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983781 216433 0.965887 0.989407 0.710387 25240 1 76 0.00408471 137 0 8.02759e+07 0.0338166 323728 8.11354e+07 7.45609e+06 25283 3.98093e+07 0 0.2555 0.989407 0.702861 8.02759e+07 0.00442888 1.74267e+07 8.65861e+06 1.77018e+07 153 1.78811e+07 1.13497e+07 0.00425357 1.76613e+07 49.6907 0.00398997 0.995032 0 50.3917 GTEX-1I1GR-1226-SM-ACKWA 1 C1 6 pieces, confirmed target muscularis 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 863 883 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992536 201983 0.968461 0.994112 0.772332 24178 1 76 0.00310862 270 0 9.2864e+07 0.031334 1.82135e+06 9.3414e+07 1.28618e+07 24213 4.6248e+07 0 0.196128 0.994112 0.767785 9.2864e+07 0.00385902 2.01887e+07 9.47575e+06 2.05177e+07 264 2.04917e+07 1.14636e+07 0.00348322 2.03516e+07 49.8285 0.0194976 0.995688 0 50.4042 GTEX-1I1GR-1326-SM-ARU7B 1 C1 6 pieces, squamous mucosa up to ~0.5mm, ~50-60% thickness 6.2 Esophagus Esophagus - Mucosa 0006920 865 882 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992622 351777 0.970549 0.993879 0.793887 22419 1 76 0.00221689 155 0 7.18146e+07 0.0291941 827218 7.22569e+07 2.56828e+06 22438 3.57833e+07 0 0.176661 0.993879 0.789028 7.18146e+07 0.00305369 1.59441e+07 8.95735e+06 1.6143e+07 181 1.61589e+07 1.03211e+07 0.00263476 1.60133e+07 49.7738 0.0114483 0.995136 0 50.3101 GTEX-1I1GR-1426-SM-CY8H8 1 C1 6 pieces, confirmed target muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 866 882 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989274 325554 0.962965 0.991538 0.774447 27980 1 76 0.004601 130 0 6.85467e+07 0.0368391 1.05751e+06 6.91318e+07 7.77329e+06 28013 3.40916e+07 0 0.188518 0.991538 0.767893 6.85467e+07 0.00781287 1.47042e+07 6.75303e+06 1.48272e+07 151 1.48307e+07 9.17304e+06 0.00620327 1.48438e+07 50.0221 0.0152971 0.993801 0 50.2083 GTEX-1I1GR-1526-SM-CNNQE 1 C1 2 pieces, mild macrovesicular steatosis; moderate passive congestion 5.6 Liver Liver 0001114 867 881 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99135 307832 0.966265 0.993632 0.795855 22444 1 76 0.00292992 264 0 8.7324e+07 0.0336276 2.57533e+06 8.78837e+07 9.4981e+06 22465 4.34701e+07 0 0.17041 0.993632 0.790787 8.7324e+07 0.00438905 1.8941e+07 1.47065e+07 1.95684e+07 264 1.9517e+07 8.2526e+06 0.00365781 1.9171e+07 49.5528 0.0293039 0.995913 0 50.8146 GTEX-1I1GR-1726-SM-COH39 1 C1 2 pieces, ~5-10% fascia, rep delineated 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 870 879 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991425 251894 0.970981 0.992824 0.779972 24161 1 76 0.00376828 150 0 7.19969e+07 0.0287369 821192 7.25173e+07 7.31131e+06 24186 3.58483e+07 0 0.19101 0.992824 0.774374 7.19969e+07 0.00467287 1.57989e+07 9.06857e+06 1.59404e+07 168 1.5934e+07 1.01066e+07 0.00421994 1.59065e+07 49.9568 0.0113241 0.994223 0 50.2228 GTEX-1I1GR-2226-SM-ARL7F 1 C1 6 pieces, confirmed target muscularis 6.1 Colon Colon - Sigmoid 0001159 885 868 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991449 809418 0.966133 0.991571 0.776396 22417 1 76 0.00198466 123 0 6.00018e+07 0.0336299 405845 6.05118e+07 3.74186e+06 22441 2.98094e+07 0 0.189737 0.991571 0.769851 6.00018e+07 0.00250073 1.29407e+07 6.26725e+06 1.29578e+07 141 1.32107e+07 9.25106e+06 0.00224266 1.2697e+07 49.0086 0.00670687 0.991692 0 50.033 GTEX-1I1GR-2526-SM-CNNQF 2 C1 6 pieces, target mucosa is ~0.5mm, ~15-20% thickness 5.8 Colon Colon - Transverse 0001157 892 862 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.988453 213278 0.967844 0.990848 0.800517 24323 1 76 0.00326063 131 0 6.31515e+07 0.0295559 661102 6.37348e+07 6.76226e+06 24344 3.13322e+07 0 0.167326 0.990848 0.793191 6.31515e+07 0.00491396 1.38083e+07 8.08005e+06 1.39633e+07 150 1.39828e+07 9.13451e+06 0.0040853 1.39252e+07 49.8968 0.0103727 0.993243 0 50.2791 GTEX-1I1GR-2726-SM-A8N8L 1 C1 2 pieces, spermatogenesis appears reduced 6.5 Testis Testis 0000473 895 860 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.98509 421454 0.921854 0.987283 0.713924 34799 1 76 0.0109518 181 0 1.07068e+08 0.0778296 895728 1.08447e+08 1.9707e+07 34872 5.32214e+07 0 0.20793 0.987283 0.704845 1.07068e+08 0.0107436 2.19573e+07 1.79623e+07 2.21577e+07 189 2.22733e+07 1.6714e+07 0.0108479 2.20567e+07 49.7557 0.00825958 0.989476 0 50.2272 GTEX-1I1GR-2826-SM-A8N8F 1 C1 4 pieces, no abnormalities 7.4 Brain Brain - Cerebellum 0002037 900 856 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986368 669359 0.940062 0.988083 0.697008 26520 1 76 0.011338 201 0 1.18163e+08 0.0594852 1.1987e+06 1.19588e+08 2.14746e+07 26562 5.87169e+07 0 0.243054 0.988083 0.688702 1.18163e+08 0.0104357 2.5276e+07 2.89764e+07 2.55704e+07 254 2.56949e+07 1.46185e+07 0.0108876 2.53504e+07 49.6625 0.0100236 0.989799 0 50.2895 GTEX-1I1GR-2926-SM-CNNQG 1 C1 4 pieces, no abnormalities 6.9 Brain Brain - Cortex 0001870 903 853 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991683 531202 0.962636 0.993916 0.827753 24376 1 76 0.00259746 269 0 9.75411e+07 0.03703 3.72368e+06 9.81382e+07 1.05026e+07 24394 4.85606e+07 0 0.134883 0.993916 0.822717 9.75411e+07 0.00348134 2.11813e+07 2.06195e+07 2.16932e+07 308 2.16411e+07 1.05216e+07 0.00303841 2.14176e+07 49.7405 0.0379432 0.996149 0 50.5969 GTEX-1I1GR-3026-SM-ARU7C 1 C1 1 piece, commingled adeno-and neuro-hypophysis, delineated. Small adherent nubbin of dura, ~3x2mm, also delineated 6.3 Pituitary Pituitary 0000007 904 852 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992329 381229 0.962252 0.993487 0.77901 25487 1 76 0.00223356 204 0 8.0887e+07 0.0374861 572066 8.14173e+07 2.75091e+06 25527 4.03074e+07 0 0.183242 0.993487 0.773936 8.0887e+07 0.00283484 1.73939e+07 1.10785e+07 1.75402e+07 217 1.75719e+07 1.17088e+07 0.00253385 1.74501e+07 49.826 0.00702634 0.994645 0 50.2094 GTEX-1I1GS-0004-SM-DHP2C B1 Blood Whole Blood 0013756 613 BP-58680 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/08/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GS-0005-SM-DHXIW B1 7.9 Blood Whole Blood 0013756 613 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.966851 243795 0.99065 0.967647 0.835577 15572 1 76 0.00218137 140 0 1.09978e+08 0.00860712 227385 1.13655e+08 5.80753e+06 15574 5.47701e+07 0 0.155073 0.967647 0.808544 1.09978e+08 0.00277656 2.66632e+07 1.90933e+08 2.66706e+07 199 2.67051e+07 3.34898e+07 0.00247872 2.67266e+07 50.0201 0.00200066 0.968444 0 50.0069 GTEX-1I1GS-0011-R11a-SM-C1YRU B1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 686 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988749 979012 0.946963 0.991463 0.745123 24762 1 76 0.00202915 375 0 1.17538e+08 0.0525672 1.16318e+06 1.1855e+08 5.30943e+06 24800 5.84153e+07 0 0.20184 0.991463 0.738762 1.17538e+08 0.0025615 2.52716e+07 1.49938e+07 2.54572e+07 348 2.55886e+07 1.65993e+07 0.00229459 2.54185e+07 49.8333 0.00981174 0.994178 0 50.1829 GTEX-1I1GS-0011-R1a-SM-CJI43 B1, A1 6.5 Brain Brain - Hippocampus 0001954 686 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992412 722560 0.959122 0.993978 0.833237 22689 1 76 0.00196808 203 0 6.75804e+07 0.0406651 3.8764e+06 6.79899e+07 4.49643e+06 22706 3.36366e+07 0 0.125885 0.993978 0.828219 6.75804e+07 0.00233929 1.45578e+07 1.63682e+07 1.50774e+07 224 1.50175e+07 6.34352e+06 0.00215339 1.47062e+07 49.4764 0.0570144 0.995543 0 50.8767 GTEX-1I1GS-0011-R2b-SM-CMKHG B1, A1 6.2 Brain Brain - Substantia nigra 0002038 686 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994977 334324 0.969008 0.996094 0.846239 23876 1 76 0.00180655 382 0 1.10138e+08 0.0307553 6.58011e+06 1.1057e+08 7.18358e+06 23895 5.49097e+07 0 0.122769 0.996094 0.842933 1.10138e+08 0.00288607 2.42108e+07 1.75122e+07 2.47906e+07 381 2.44933e+07 1.26039e+07 0.00234571 2.45947e+07 50.1033 0.0595109 0.99721 0 50.5917 GTEX-1I1GS-0011-R3b-SM-CYPS7 B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 686 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994589 513150 0.960341 0.995593 0.856876 23246 1 76 0.00206546 267 0 7.55808e+07 0.0393735 5.81244e+06 7.59154e+07 5.57909e+06 23262 3.76795e+07 0 0.103465 0.995593 0.8531 7.55808e+07 0.00248396 1.64619e+07 1.65658e+07 1.68808e+07 297 1.6753e+07 8.02007e+06 0.0022745 1.66588e+07 49.859 0.0765647 0.996597 0 50.6282 GTEX-1I1GS-0011-R5a-SM-CKZPC B1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 686 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991909 711636 0.948281 0.993981 0.813978 25277 1 76 0.00187194 270 0 9.37991e+07 0.0514002 5.15434e+06 9.4367e+07 8.22211e+06 25304 4.67118e+07 0 0.134304 0.993981 0.809078 9.37991e+07 0.00310941 2.01928e+07 2.53692e+07 2.04824e+07 324 2.05038e+07 1.11055e+07 0.00248939 2.03469e+07 49.808 0.0546202 0.996053 0 50.356 GTEX-1I1GS-0011-R6b-SM-CMKHE B1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 686 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993947 416639 0.961372 0.995154 0.823781 24609 1 76 0.00188605 373 0 1.02848e+08 0.0384419 8.27498e+06 1.03349e+08 6.89468e+06 24629 5.12734e+07 0 0.137591 0.995154 0.819789 1.02848e+08 0.00270588 2.21739e+07 2.51313e+07 2.27477e+07 345 2.27237e+07 9.26428e+06 0.00229547 2.23012e+07 49.5308 0.0800686 0.996361 0 50.6387 GTEX-1I1GS-0011-R7a-SM-CM2T6 B1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 686 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99347 779663 0.963208 0.995025 0.852498 22977 1 76 0.00169981 369 0 1.02281e+08 0.0366386 1.13098e+07 1.02793e+08 5.95771e+06 22990 5.09603e+07 0 0.11071 0.995025 0.848257 1.02281e+08 0.00256364 2.22068e+07 3.45505e+07 2.26905e+07 386 2.25637e+07 7.71932e+06 0.00213105 2.24635e+07 49.8887 0.110026 0.996582 0 50.5387 GTEX-1I1GS-0011-R8b-SM-CKZPE B1, A1 6.1 Brain Brain - Hypothalamus 0001898 686 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991155 463036 0.958481 0.993547 0.837378 23857 1 76 0.00187943 269 0 8.00248e+07 0.0412933 5.50497e+06 8.05445e+07 7.65382e+06 23877 3.98399e+07 0 0.121103 0.993547 0.831974 8.00248e+07 0.00336086 1.74264e+07 1.72609e+07 1.77557e+07 330 1.77164e+07 7.92806e+06 0.00261836 1.7628e+07 49.875 0.068347 0.995938 0 50.4679 GTEX-1I1GS-0011-R9b-SM-CMKHF B1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 686 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994614 418088 0.949397 0.995782 0.80976 22485 1 76 0.00204554 315 0 8.40767e+07 0.0503607 2.84558e+06 8.44329e+07 5.69347e+06 22501 4.1904e+07 0 0.139637 0.995782 0.806344 8.40767e+07 0.00323011 1.84275e+07 1.1888e+07 1.88548e+07 275 1.85185e+07 1.07003e+07 0.00263713 1.88641e+07 50.4621 0.0337023 0.996949 0 50.5729 GTEX-1I1GS-0126-SM-B2LVW 0 B1 6 pieces; adherent dermal fat focally up to ~0.5mm; squamous epithelium is ~20-3- microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 701 852 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989872 454665 0.96764 0.991616 0.729372 23360 1 76 0.00263533 132 0 5.60878e+07 0.0321307 321501 5.65621e+07 2.55207e+06 23379 2.78983e+07 0 0.238268 0.991616 0.723257 5.60878e+07 0.0038229 1.23247e+07 5.5622e+06 1.23852e+07 127 1.24125e+07 8.59189e+06 0.00322807 1.23918e+07 49.9582 0.00568404 0.993359 0 50.1225 GTEX-1I1GS-0226-SM-B2LVX 0 B1 2 pieces, fascia/vascular elements are ~30% of tissue, rep. delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 703 850 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99157 447638 0.974486 0.993113 0.76898 23172 1 76 0.00250338 155 0 7.46434e+07 0.0252223 281791 7.5161e+07 3.27756e+06 23196 3.71447e+07 0 0.205506 0.993113 0.763685 7.46434e+07 0.00371587 1.64119e+07 6.77697e+06 1.64944e+07 169 1.65176e+07 1.27059e+07 0.00310869 1.6501e+07 49.9749 0.00374917 0.994657 0 50.1255 GTEX-1I1GS-0326-SM-ARL7X 0 B1 2 pieces, interstitial fat/vascular elements are ~10-15% of tissue; rep delineated 8.1 Muscle Muscle - Skeletal 0011907 707 846 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992988 939018 0.976722 0.993436 0.837021 19934 1 76 0.00147374 151 0 6.48019e+07 0.0230493 614695 6.52301e+07 2.81228e+06 19949 3.22198e+07 0 0.139701 0.993436 0.831527 6.48019e+07 0.00205312 1.42277e+07 8.16532e+06 1.42181e+07 154 1.44609e+07 1.31974e+07 0.0017633 1.40076e+07 49.2038 0.00942349 0.993884 0 49.9832 GTEX-1I1GS-0726-SM-C1YS7 1 B1 2 pieces, no abnormalities; nubbin of adherent fibroadipose tissue up to ~1mm, delineated 6 Thyroid Thyroid 0002046 725 828 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988119 409216 0.964305 0.990451 0.734583 24185 1 76 0.00195441 198 0 9.5135e+07 0.0353798 184967 9.60521e+07 4.62792e+06 24229 4.73126e+07 0 0.229722 0.990451 0.727569 9.5135e+07 0.00263472 2.07172e+07 1.41018e+07 2.09001e+07 214 2.09297e+07 1.54914e+07 0.00229376 2.0898e+07 49.962 0.00192569 0.992784 0 50.2197 GTEX-1I1GS-0926-SM-A9SL5 1 B1 2 pieces, peripheral nerve and vascular elements, ~5% of tissue, rep delineated 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 731 822 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988808 250933 0.974855 0.990375 0.780255 24075 1 76 0.00682098 144 0 8.45073e+07 0.0248328 384931 8.53285e+07 1.61639e+07 24102 4.20671e+07 0 0.1946 0.990375 0.772745 8.45073e+07 0.00787809 1.86073e+07 1.16459e+07 1.88109e+07 162 1.88428e+07 1.42292e+07 0.0073487 1.87044e+07 49.8158 0.00451116 0.991943 0 50.272 GTEX-1I1GS-1226-SM-EXOHJ 1 B1 6 pieces, atherosis (focally calcified, encircled) up to ~0.8mm; adherent serosal fat up to ~2mm, rep delineated 7 Blood Vessel Artery - Aorta 0001496 750 803 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98619 343570 0.977001 0.987985 0.824751 22510 1 76 0.00202772 217 0 9.0681e+07 0.0225728 237610 9.17838e+07 5.20201e+06 22534 4.51114e+07 0 0.152251 0.987985 0.814841 9.0681e+07 0.00330228 1.95725e+07 8.60389e+06 1.96902e+07 237 1.96514e+07 1.78747e+07 0.00266384 1.97675e+07 50.1472 0.0025888 0.98978 0 50.15 GTEX-1I1GS-1426-SM-COH3W 1 B1 2 pieces, one (ensquared) lung with moderate edema, ~60% of tissue; rest is adherent pleura/fibroadipose tissue; sample carefully 5.8 Lung Lung 0008952 760 793 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990686 159522 0.971664 0.991894 0.747318 23522 1 76 0.00363458 145 0 7.32346e+07 0.0280388 403330 7.38331e+07 7.20018e+06 23555 3.64594e+07 0 0.224346 0.991894 0.74126 7.32346e+07 0.00458677 1.61182e+07 1.15268e+07 1.61952e+07 156 1.61557e+07 1.17718e+07 0.00411009 1.62494e+07 50.1446 0.00546273 0.993101 0 50.1192 GTEX-1I1GS-1826-SM-C1YS8 3 B1 2 pieces, advanced autolysis 5.8 Testis Testis 0000473 786 767 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987942 252863 0.933287 0.990289 0.714656 31092 1 76 0.00194389 132 0 6.01737e+07 0.0664542 1.31483e+06 6.07638e+07 2.97665e+06 31142 2.99315e+07 0 0.218632 0.990289 0.707716 6.01737e+07 0.00238834 1.27509e+07 8.33934e+06 1.27283e+07 136 1.27399e+07 8.26169e+06 0.00216559 1.28617e+07 50.2379 0.0216384 0.992635 0 49.9557 GTEX-1I1GS-2126-SM-ARU7G 1 B1 6 pieces, squamous mucosa partially sloughing, up to~0.3mm, ~10-15% thickness; submucosal mucus glands present, rep. delineated 6.5 Esophagus Esophagus - Mucosa 0006920 798 755 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992625 321553 0.968744 0.993781 0.752263 22450 1 76 0.00220172 136 0 6.58777e+07 0.031046 312159 6.62899e+07 2.4026e+06 22474 3.2819e+07 0 0.216481 0.993781 0.747585 6.58777e+07 0.00288232 1.46635e+07 7.69887e+06 1.47697e+07 141 1.47974e+07 1.19585e+07 0.00254162 1.47099e+07 49.8517 0.004709 0.994938 0 50.1805 GTEX-1I1GS-2626-SM-B2LY3 0 B1 6 pieces, up to ~1mm dermal fat; squamous epithelium is ~20-25microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 813 740 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991142 438531 0.975378 0.992828 0.757911 23648 1 76 0.00242088 183 0 7.86146e+07 0.0243724 383915 7.91825e+07 3.2556e+06 23676 3.91263e+07 0 0.217467 0.992828 0.752475 7.86146e+07 0.00372184 1.73632e+07 7.94171e+06 1.74308e+07 181 1.7466e+07 1.26706e+07 0.00307026 1.74582e+07 49.9888 0.00484848 0.994513 0 50.0971 GTEX-1I1GS-3026-SM-ACKW4 1 B1 4 pieces, fragmented; no abnormalities 6.7 Brain Brain - Cortex 0001870 878 675 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 EXCLUDE 0.991795 558354 0.939753 0.993415 0.734722 24159 1 76 0.00286668 288 0 9.30114e+07 0.0599283 2.18679e+06 9.3628e+07 1.25093e+07 24193 4.63226e+07 0 0.205032 0.993415 0.729883 9.30114e+07 0.00377209 1.99202e+07 2.59503e+07 2.03458e+07 260 2.0247e+07 1.15301e+07 0.00331865 2.01615e+07 49.8943 0.0233562 0.995034 0 50.5284 GTEX-1I1GS-3226-SM-CNNR5 3 B1 1 pieces, badly autolyzed, apparent adenohypophysis 6.5 Pituitary Pituitary 0000007 875 678 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991389 282620 0.958473 0.993148 0.756773 25846 1 76 0.00237896 275 0 9.54286e+07 0.0413077 379699 9.6087e+07 9.92747e+06 25888 4.75254e+07 0 0.201701 0.993148 0.751587 9.54286e+07 0.00334145 2.04685e+07 1.33914e+07 2.06926e+07 270 2.07255e+07 1.45907e+07 0.00285935 2.05934e+07 49.8402 0.00395162 0.994907 0 50.2723 GTEX-1I1GT-0003-SM-EZ6M8 B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -182 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991528 1.08849e+06 0.968464 0.993027 0.823355 22738 1 76 0.00272998 286 0 1.23704e+08 0.0305633 590501 1.24573e+08 9.37857e+06 22783 6.16047e+07 0 0.145109 0.993027 0.817613 1.23704e+08 0.00364222 2.75103e+07 1.47922e+07 2.76178e+07 309 2.7674e+07 2.93075e+07 0.00318541 2.76268e+07 49.9573 0.0047402 0.994525 0 50.0974 GTEX-1I1GT-0005-SM-A9SK5 B1 8.7 Blood Whole Blood 0013756 -182 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.98212 894847 0.951865 0.983935 0.786578 19190 1 76 0.00662177 112 0 7.94482e+07 0.0474341 370831 8.07454e+07 1.38766e+07 19201 3.9502e+07 0 0.165287 0.983935 0.773942 7.94482e+07 0.00879709 1.74171e+07 7.33504e+07 1.75637e+07 128 1.76181e+07 1.62097e+07 0.00770742 1.75127e+07 49.8501 0.0045926 0.98575 0 50.2095 GTEX-1I1GT-0008-SM-EZ6XN B1 Skin Cells - Cultured fibroblasts EFO_0002009 464 BP-75656 RNA isolation_Trizol Manual (Cell Pellet) 06/13/2016 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-1I1GT-0126-SM-B2LWM 0 B1 2 pieces; include 10-20% attached fat, cortex and medulla 8.9 Adrenal Gland Adrenal Gland 0002369 350 1136 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992194 812373 0.977813 0.994028 0.832162 23302 1 76 0.00247592 272 0 1.04242e+08 0.021784 1.54654e+06 1.04868e+08 4.29759e+06 23333 5.18785e+07 0 0.145651 0.994028 0.827192 1.04242e+08 0.00356125 2.30163e+07 9.31493e+06 2.31989e+07 296 2.33045e+07 1.82466e+07 0.00301759 2.30714e+07 49.7487 0.0147475 0.995861 0 50.1975 GTEX-1I1GT-0126-SM-E9WQZ 0 B1 2 pieces; include 10-20% attached fat, cortex and medulla Adrenal Gland Adrenal Gland 0002369 350 1136 BP-69146 DNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2015 LCSET-10779 04/15/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GT-0226-SM-A8N8N 0 B1 2 pieces 6.9 Spleen Spleen 0002106 351 1135 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985099 387543 0.960583 0.98752 0.769644 25300 1 76 0.0112898 163 0 9.08164e+07 0.0382454 520109 9.19641e+07 1.62641e+07 25338 4.50891e+07 0 0.190938 0.98752 0.760039 9.08164e+07 0.0114802 1.97909e+07 1.68997e+07 2.0069e+07 174 2.01343e+07 1.32785e+07 0.0113848 1.99425e+07 49.7607 0.00565557 0.989941 0 50.3488 GTEX-1I1GT-0326-SM-ADEI7 1 B1 2 pieces; mild plaque, focal medial calcification 7.6 Blood Vessel Artery - Tibial 0007610 472 1014 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982277 429069 0.973682 0.988819 0.811575 23203 1 76 0.00333553 281 0 1.10564e+08 0.0259152 286798 1.11814e+08 1.16935e+07 23230 5.47745e+07 0 0.162106 0.988819 0.802501 1.10564e+08 0.00351212 2.37261e+07 9.20738e+06 2.39992e+07 292 2.42679e+07 2.05164e+07 0.00342324 2.40966e+07 49.8229 0.00256496 0.995361 0 50.2861 GTEX-1I1GT-0426-SM-ADEI8 1 B1 2 pieces; 1 piece includes ~30% attached fat 6.6 Nerve Nerve - Tibial 0001323 472 1014 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981933 536910 0.966707 0.988301 0.753013 24698 1 76 0.0037084 219 0 9.64529e+07 0.0330394 420474 9.75946e+07 1.05312e+07 24748 4.77733e+07 0 0.213695 0.988301 0.744204 9.64529e+07 0.0034407 2.09453e+07 9.92031e+06 2.12513e+07 255 2.1521e+07 1.38526e+07 0.00357541 2.12198e+07 49.6476 0.00430837 0.99467 0 50.3625 GTEX-1I1GT-0526-SM-CGQEQ 1 B1 2 pieces; fat with trivial fibrous/vascular component 6 Adipose Tissue Adipose - Subcutaneous 0002190 473 1013 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991078 323459 0.976562 0.992554 0.83782 25015 1 76 0.00361986 383 0 1.65722e+08 0.0231563 906840 1.66965e+08 1.11976e+07 25063 8.25893e+07 0 0.138742 0.992554 0.831581 1.65722e+08 0.00378619 3.62498e+07 1.62409e+07 3.6535e+07 418 3.64343e+07 2.58762e+07 0.00369847 3.65367e+07 50.0702 0.00543131 0.99403 0 50.196 GTEX-1I1GT-0626-SM-CGQER 1 B1 6 pieces; well trimmed, epidermis measures 34 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 474 1012 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993175 348093 0.969639 0.994663 0.766504 25657 1 76 0.00365452 414 0 1.59671e+08 0.0301501 604912 1.60527e+08 1.08899e+07 25717 7.95732e+07 0 0.203135 0.994663 0.762413 1.59671e+08 0.00374767 3.46357e+07 1.64609e+07 3.4731e+07 391 3.4716e+07 2.37231e+07 0.00369854 3.48414e+07 50.0902 0.00376828 0.99615 0 50.0687 GTEX-1I1GT-0726-SM-B2LWN 0 B1 2 pieces; 1 piece includes ~30% attachment of fat/vessels/nerve 7.1 Muscle Muscle - Skeletal 0011907 475 1011 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992734 539389 0.981595 0.994452 0.868273 19685 1 76 0.00241488 220 0 8.33628e+07 0.0182141 962920 8.38279e+07 3.28991e+06 19693 4.15057e+07 0 0.113323 0.994452 0.863455 8.33628e+07 0.00364276 1.82801e+07 1.01515e+07 1.86165e+07 247 1.86188e+07 1.42394e+07 0.00302776 1.83988e+07 49.7028 0.0114869 0.996169 0 50.4558 GTEX-1I1GT-0826-SM-B2LWO 0 B1 2 pieces; 0.59mm adenomatoid nodule 6.6 Thyroid Thyroid 0002046 502 984 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991584 540297 0.96818 0.993378 0.752741 23683 1 76 0.00256075 152 0 7.55304e+07 0.0315453 290220 7.60338e+07 3.41446e+06 23719 3.75941e+07 0 0.215438 0.993378 0.747757 7.55304e+07 0.00368325 1.65361e+07 7.1594e+06 1.66664e+07 167 1.67064e+07 1.14043e+07 0.00312099 1.66187e+07 49.8684 0.00381698 0.995172 0 50.1963 GTEX-1I1GT-0926-SM-AHZ2G 1 B1 2 pieces; up to 50% of both is fat, numerous islets, PanIN 1B 7.1 Pancreas Pancreas 0001150 505 981 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.990112 260833 0.975034 0.991533 0.818839 22370 1 76 0.00672637 107 0 8.02148e+07 0.0247207 210059 8.08998e+07 1.40355e+07 22393 3.99446e+07 0 0.156194 0.991533 0.811906 8.02148e+07 0.0085822 1.82998e+07 1.76693e+07 1.847e+07 120 1.84624e+07 2.06042e+07 0.00765295 1.84227e+07 49.9462 0.00259653 0.992955 0 50.2315 GTEX-1I1GT-1026-SM-ARZLV 1 B1 6 pieces; well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 506 980 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987462 904868 0.969085 0.989835 0.756739 21991 1 76 0.00259048 161 0 6.40951e+07 0.0307189 287804 6.47533e+07 2.91293e+06 22015 3.17794e+07 0 0.212346 0.989835 0.749047 6.40951e+07 0.00385339 1.39345e+07 7.84266e+06 1.40648e+07 142 1.43449e+07 1.03962e+07 0.00322042 1.37916e+07 49.0167 0.00444462 0.992209 0 50.2327 GTEX-1I1GT-1126-SM-ARL7J 1 B1 2 pieces; fat with dense fibrocollagenous stroma with interspersed benign ductal/lobular elements 5.8 Breast Breast - Mammary Tissue 0008367 507 979 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.9871 626100 0.969403 0.987091 0.780212 24437 1 76 0.00200939 279 0 9.57118e+07 0.0302209 542176 9.69636e+07 6.51716e+06 24488 4.76103e+07 0 0.189192 0.987091 0.77014 9.57118e+07 0.00245313 2.08051e+07 1.03659e+07 2.1127e+07 271 2.13928e+07 1.56152e+07 0.00223126 2.05355e+07 48.9776 0.00559154 0.987082 0 50.3839 GTEX-1I1GT-1226-SM-B2LVK 0 B1 6 pieces; squamous mucosa with mild, predominantly chronic, inflammation 6.2 Vagina Vagina 0000996 507 979 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991223 342887 0.967251 0.992736 0.74483 23619 1 76 0.00267302 138 0 6.60883e+07 0.0324742 291654 6.65718e+07 3.2015e+06 23649 3.28839e+07 0 0.222421 0.992736 0.73942 6.60883e+07 0.003802 1.44429e+07 6.67475e+06 1.45781e+07 152 1.45823e+07 9.37326e+06 0.00323665 1.45329e+07 49.9153 0.00438104 0.99425 0 50.2329 GTEX-1I1GT-1326-SM-ACKWB 0 B1 2 pieces; 50% fat/50% fibrous 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 510 976 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992117 224370 0.975591 0.993978 0.827024 24209 1 76 0.00272578 279 0 1.03532e+08 0.0241235 385971 1.04159e+08 1.42629e+07 24246 5.15622e+07 0 0.148567 0.993978 0.822044 1.03532e+08 0.00385486 2.27303e+07 1.0138e+07 2.29582e+07 287 2.2956e+07 1.89715e+07 0.00328927 2.29145e+07 49.9548 0.00370558 0.995839 0 50.2495 GTEX-1I1GT-1426-SM-A8N8M 0 B1 6 pieces 9 Esophagus Esophagus - Mucosa 0006920 523 963 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985782 325533 0.973584 0.987879 0.821503 23163 1 76 0.0112641 179 0 8.98271e+07 0.0259056 438832 9.09293e+07 1.70061e+07 23180 4.46555e+07 0 0.152081 0.987879 0.811545 8.98271e+07 0.0108622 1.99441e+07 1.64185e+07 2.01448e+07 169 2.01946e+07 1.77512e+07 0.0110636 2.00837e+07 49.8623 0.00482608 0.989975 0 50.2503 GTEX-1I1GT-1526-SM-ARL7K 1 B1 6 pieces; target muscularis 8.3 Esophagus Esophagus - Muscularis 0004648 524 962 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.994763 775962 0.972829 0.994698 0.798475 22585 1 76 0.0017676 165 0 7.17168e+07 0.0268559 386005 7.20991e+07 2.9696e+06 22604 3.5692e+07 0 0.174354 0.994698 0.794241 7.17168e+07 0.00216836 1.554e+07 7.16533e+06 1.54657e+07 168 1.56683e+07 1.22607e+07 0.00196799 1.53338e+07 49.4605 0.00535381 0.994633 0 49.8801 GTEX-1I1GT-1626-SM-B2LWR 0 B1 6 pieces; target muscularis with small portion of submucosa 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 524 962 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991992 673962 0.975016 0.993646 0.809054 22777 1 76 0.00249867 208 0 8.35092e+07 0.024696 499451 8.40433e+07 3.62888e+06 22802 4.1562e+07 0 0.165962 0.993646 0.803913 8.35092e+07 0.00358695 1.81463e+07 7.25124e+06 1.83729e+07 205 1.84145e+07 1.38061e+07 0.0030419 1.8228e+07 49.7456 0.00594278 0.995299 0 50.3103 GTEX-1I1GT-1726-SM-C1YS3 1 B1 6 pieces; mucosa/submucosa/muscularis; mild to moderate autolysis 7.2 Stomach Stomach 0000945 525 961 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98844 385165 0.977918 0.991137 0.820053 23624 1 76 0.0019706 320 0 9.18857e+07 0.021616 778304 9.27074e+07 4.19676e+06 23657 4.5677e+07 0 0.157865 0.991137 0.812784 9.18857e+07 0.00263676 2.07153e+07 5.18146e+07 2.09267e+07 259 2.09706e+07 1.92206e+07 0.00230277 2.08994e+07 49.915 0.00839527 0.993833 0 50.2538 GTEX-1I1GT-1826-SM-ARZLW 1 B1 6 pieces; predominantly partially autolyzed mucosa and submucosa with good (but variable) lymphoid component, small portion of muscularis in 1 piece 8.5 Small Intestine Small Intestine - Terminal Ileum 0001211 539 947 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988802 1.12271e+06 0.972564 0.990753 0.806207 23066 1 76 0.002463 139 0 6.48078e+07 0.02716 300573 6.54127e+07 2.74189e+06 23082 3.21355e+07 0 0.166357 0.990753 0.798752 6.48078e+07 0.00356346 1.40813e+07 7.3409e+06 1.41406e+07 145 1.44646e+07 1.14512e+07 0.00301214 1.38674e+07 48.9461 0.00459503 0.992704 0 50.105 GTEX-1I1GT-1926-SM-ARU7D 2 B1 6 pieces; full thickness colon, mild melanosis, mucosa more autolyzed than muscularis 5.8 Colon Colon - Transverse 0001157 539 947 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991652 202310 0.972008 0.992874 0.843272 22924 1 76 0.00255454 161 0 6.86189e+07 0.026165 591810 6.91114e+07 2.27313e+06 22943 3.41267e+07 0 0.128736 0.992874 0.837262 6.86189e+07 0.00347956 1.49807e+07 7.75614e+06 1.51628e+07 188 1.50890e+07 9.70355e+06 0.00301649 1.51238e+07 50.0575 0.00856314 0.994095 0 50.3019 GTEX-1I1GT-2026-SM-CKZPK 1 B1 6 pieces; target muscularis with small strip of residual mucosa on 1 piece 8.1 Colon Colon - Sigmoid 0001159 540 946 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991386 344905 0.973997 0.993472 0.801869 24452 1 76 0.0021202 386 0 1.21957e+08 0.0256955 538399 1.22759e+08 1.25026e+07 24487 6.07346e+07 0 0.172128 0.993472 0.796634 1.21957e+08 0.00346206 2.64695e+07 1.13269e+07 2.67819e+07 339 2.68313e+07 2.07403e+07 0.00278972 2.66507e+07 49.8312 0.00438583 0.995558 0 50.2933 GTEX-1I1GU-0004-SM-DHP2B B1 Blood Whole Blood 0013756 205 BP-58680 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/08/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GU-0008-SM-EXUT7 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 356 BP-59924 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99381 545353 0.983395 0.99449 0.85936 19321 1 76 0.00144485 138 0 6.19156e+07 0.0163001 174918 6.22587e+07 1.70914e+06 19332 3.08378e+07 0 0.124035 0.99449 0.854625 6.19156e+07 0.0020131 1.38939e+07 4.81941e+06 1.39971e+07 133 1.40256e+07 1.60519e+07 0.00172878 1.39083e+07 49.79 0.00280954 0.99517 0 50.185 GTEX-1I1GU-0226-SM-AHZ2J 1 B1 2 pieces; moderately congested; well dissected; no fat 9.2 Adrenal Gland Adrenal Gland 0002369 237 1050 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.994316 371018 0.980332 0.99582 0.843576 22079 1 76 0.00200946 207 0 8.85563e+07 0.0193289 1.54667e+06 8.8928e+07 3.12440e+06 22098 4.41162e+07 0 0.136756 0.99582 0.84005 8.85563e+07 0.00281591 1.96963e+07 9.01799e+06 1.98391e+07 235 1.98318e+07 1.61484e+07 0.00241208 1.98218e+07 49.9874 0.0173923 0.997324 0 50.1806 GTEX-1I1GU-0326-SM-AHZ2K 1 B1 2 pieces; well dissected; no fat; a few partially hyalinized islets 7.2 Pancreas Pancreas 0001150 241 1046 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989253 304862 0.974228 0.99076 0.814287 22959 1 76 0.00678771 122 0 8.92568e+07 0.0255625 296496 9.00892e+07 1.5699e+07 22979 4.44395e+07 0 0.159941 0.99076 0.806763 8.92568e+07 0.00842138 2.0282e+07 1.84709e+07 2.04578e+07 135 2.04418e+07 2.24533e+07 0.0076033 2.04315e+07 49.9875 0.00329114 0.992267 0 50.2158 GTEX-1I1GU-0426-SM-ARL7Y 1 B1 6 pieces; minimal plaque; adventitial stroma up to 1mm thick 7.1 Blood Vessel Artery - Aorta 0001496 242 1045 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.99299 572722 0.974059 0.993188 0.816469 21339 1 76 0.00182223 133 0 6.48767e+07 0.0255927 219525 6.53217e+07 4.12401e+06 21357 3.22674e+07 0 0.15759 0.993188 0.810907 6.48767e+07 0.00243235 1.40966e+07 5.83014e+06 1.41518e+07 149 1.43148e+07 1.25096e+07 0.00212723 1.39507e+07 49.3558 0.00336068 0.993385 0 50.0977 GTEX-1I1GU-0526-SM-B2LX2 0 B1 2 pieces; 2.5mm fibrous focus [labeled] 8.5 Lung Lung 0008952 244 1043 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992296 650627 0.976258 0.993929 0.817362 24392 1 76 0.00241884 277 0 1.11518e+08 0.023376 350443 1.12199e+08 4.17392e+06 24420 5.55309e+07 0 0.158896 0.993929 0.8124 1.11518e+08 0.00384578 2.48095e+07 8.66814e+06 2.49761e+07 299 2.50772e+07 2.15004e+07 0.00313114 2.48799e+07 49.8025 0.0031234 0.995561 0 50.1673 GTEX-1I1GU-0626-SM-CMKHR 0 B1 2 pieces; 2mm partial lymph node in 1 piece [labeled] 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 247 1040 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995799 296257 0.979442 0.996555 0.851908 23113 1 76 0.00189109 378 0 1.18029e+08 0.0202555 547067 1.18437e+08 7.12540e+06 23137 5.88725e+07 0 0.127534 0.996555 0.848973 1.18029e+08 0.00274812 2.59891e+07 9.95072e+06 2.62115e+07 336 2.61615e+07 2.29409e+07 0.00231928 2.61242e+07 49.9644 0.00461904 0.997311 0 50.2131 GTEX-1I1GU-0726-SM-ARU7H 0 B1 2 pieces; brisk spermatogenesis 7.4 Testis Testis 0000473 248 1039 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991501 504337 0.933776 0.992662 0.736538 33272 1 76 0.00214746 219 0 9.62482e+07 0.0658772 797626 9.69597e+07 3.22986e+06 33334 4.79598e+07 0 0.197238 0.992662 0.731134 9.62482e+07 0.00278105 2.01602e+07 1.23615e+07 2.02148e+07 230 2.03146e+07 1.69384e+07 0.00246389 2.01527e+07 49.7999 0.00822637 0.993823 0 50.0677 GTEX-1I1GU-0826-SM-ARZM5 0 B1 2 pieces; 0.6mm focus of skeletal muscle in fibrous capsule on edge of 1 piece [circled] 7.9 Thyroid Thyroid 0002046 249 1038 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989249 658376 0.972299 0.991471 0.792987 22939 1 76 0.0025314 139 0 7.32754e+07 0.0273309 208601 7.39058e+07 3.10947e+06 22968 3.63918e+07 0 0.179312 0.991471 0.786223 7.32754e+07 0.0035628 1.60952e+07 6.83748e+06 1.62447e+07 153 1.64402e+07 1.41203e+07 0.00304594 1.60475e+07 49.3956 0.00282253 0.993692 0 50.2311 GTEX-1I1GU-0926-SM-ACKVS 0 B1 6 pieces; well trimmed; 2% dermal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 251 1036 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.990701 321804 0.971259 0.992958 0.78319 22690 1 76 0.00302656 181 0 8.27384e+07 0.0285204 700332 8.33252e+07 1.15209e+07 22718 4.11819e+07 0 0.188069 0.992958 0.777674 8.27384e+07 0.00406557 1.82189e+07 1.30022e+07 1.84299e+07 192 1.84459e+07 1.3664e+07 0.00354488 1.83808e+07 49.9116 0.0084048 0.995215 0 50.2878 GTEX-1I1GU-1026-SM-ADEHJ 0 B1 2 pieces; 2 small ducts (circled) in adipose tissue with <2% fibrous content 7.3 Breast Breast - Mammary Tissue 0008367 254 1033 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982443 508916 0.978232 0.988824 0.83128 23511 1 76 0.00348494 282 0 1.07449e+08 0.0214334 390424 1.08664e+08 1.23787e+07 23538 5.32454e+07 0 0.146951 0.988824 0.82199 1.07449e+08 0.00322653 2.34801e+07 1.17044e+07 2.38184e+07 281 2.41219e+07 2.04653e+07 0.00335657 2.3793e+07 49.6568 0.00359296 0.995204 0 50.3576 GTEX-1I1GU-1126-SM-A96S9 1 B1 2 pieces; well preserved glands without hyperplasia 8 Prostate Prostate 0002367 257 1030 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993067 304527 0.96797 0.994283 0.783585 24179 1 76 0.00207793 210 0 8.04902e+07 0.0317238 395198 8.0953e+07 2.71541e+06 24211 4.01161e+07 0 0.184385 0.994283 0.779105 8.04902e+07 0.00232777 1.7723e+07 7.6257e+06 1.78592e+07 211 1.78559e+07 1.36952e+07 0.0022027 1.78199e+07 49.9495 0.00488182 0.995498 0 50.1914 GTEX-1I1GU-1226-SM-A9SKT 0 B1 6 pieces; musscle with small amount of submucosal stroma 8.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 262 1025 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990981 391417 0.977206 0.992196 0.84821 23023 1 76 0.00665973 284 0 1.14779e+08 0.0224204 785369 1.15682e+08 2.07566e+07 23038 5.71766e+07 0 0.128996 0.992196 0.841591 1.14779e+08 0.00745206 2.50231e+07 1.08637e+07 2.52252e+07 274 2.5249e+07 2.19697e+07 0.00705541 2.51302e+07 49.8821 0.00678905 0.993411 0 50.201 GTEX-1I1GU-1326-SM-ARZM6 0 B1 6 pieces; well dissected muscle with thin [0.6mm] layer of submucosal stroma 8.4 Esophagus Esophagus - Muscularis 0004648 264 1023 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989293 896717 0.976439 0.991673 0.84809 20729 1 76 0.00235013 145 0 6.95725e+07 0.0232349 703874 7.01567e+07 2.67546e+06 20738 3.45262e+07 0 0.128349 0.991673 0.841028 6.95725e+07 0.00376433 1.51768e+07 7.81203e+06 1.52793e+07 163 1.54852e+07 1.33194e+07 0.00305553 1.51159e+07 49.3965 0.0100329 0.994053 0 50.1684 GTEX-1I1GU-1426-SM-B2LX3 0 B1 6 pieces; slightly hyperplastic squamous layer 9.3 Esophagus Esophagus - Mucosa 0006920 266 1021 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990216 1.14673e+06 0.972099 0.991881 0.821949 22990 1 76 0.00251592 284 0 1.08877e+08 0.0275844 683824 1.09768e+08 3.93562e+06 23018 5.41795e+07 0 0.150149 0.991881 0.815276 1.08877e+08 0.00365959 2.43683e+07 2.17272e+07 2.44873e+07 284 2.46622e+07 2.22734e+07 0.00308679 2.43661e+07 49.698 0.00622972 0.993547 0 50.1218 GTEX-1I1GU-1526-SM-A8N84 1 B1 6 pieces, 1 without muscularis; edematous submucosa & deep mucosa 7.1 Stomach Stomach 0000945 272 1015 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.975584 253243 0.978031 0.977861 0.823695 24252 1 76 0.0111304 303 0 1.06583e+08 0.0215159 1.15504e+06 1.08996e+08 1.9981e+07 24281 5.29727e+07 0 0.154336 0.977861 0.805459 1.06583e+08 0.0107769 2.41863e+07 1.07651e+08 2.4696e+07 230 2.47069e+07 2.64182e+07 0.010954 2.44151e+07 49.703 0.0105971 0.980137 0 50.5214 GTEX-1I1GU-1926-SM-ADEHK 1 B1 3 pieces; no plaque, but extensive medial calcification 6.4 Blood Vessel Artery - Tibial 0007610 350 937 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982053 398698 0.975181 0.988371 0.800291 22846 1 76 0.00358623 278 0 1.15415e+08 0.0244693 496884 1.16773e+08 1.24714e+07 22885 5.71852e+07 0 0.17489 0.988371 0.790985 1.15415e+08 0.0032271 2.49237e+07 9.55291e+06 2.52035e+07 287 2.54936e+07 2.08624e+07 0.00340781 2.5285e+07 49.7947 0.00425514 0.994689 0 50.279 GTEX-1I1GU-2026-SM-CGQF8 0 B1 2 pieces; 10% internal fat 6 Nerve Nerve - Tibial 0001323 352 935 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992581 374570 0.972453 0.994182 0.766268 26288 1 76 0.00362975 382 0 1.72442e+08 0.0273066 504214 1.73451e+08 1.14348e+07 26370 8.59114e+07 0 0.206186 0.994182 0.761809 1.72442e+08 0.00391038 3.79784e+07 1.56596e+07 3.81132e+07 407 3.80657e+07 2.61965e+07 0.00376236 3.82533e+07 50.1229 0.00290695 0.995783 0 50.0886 GTEX-1I1GU-2126-SM-CGQF9 0 B1 2 pieces; <1% fat content 8 Muscle Muscle - Skeletal 0011907 353 934 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993644 594955 0.984757 0.994988 0.887895 21740 1 76 0.00358973 394 0 1.95159e+08 0.0149979 1.90334e+06 1.96142e+08 1.3804e+07 21762 9.73252e+07 0 0.0968626 0.994988 0.883444 1.95159e+08 0.00330827 4.24886e+07 2.10804e+07 4.29032e+07 385 4.29242e+07 4.17787e+07 0.00345681 4.26301e+07 49.8281 0.00970391 0.996331 0 50.2427 GTEX-1I1GU-2226-SM-CGQFA 0 B1 6 pieces; well trimmed; 10% dermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 356 931 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99166 557950 0.972777 0.99339 0.775088 27039 1 76 0.00381196 536 0 1.84904e+08 0.0269683 1.20912e+06 1.86134e+08 1.33888e+07 27122 9.21039e+07 0 0.197689 0.99339 0.769965 1.84904e+08 0.00391633 4.0828e+07 1.86692e+07 4.09912e+07 440 4.10058e+07 2.92534e+07 0.00386127 4.10739e+07 50.0415 0.00649594 0.995121 0 50.0997 GTEX-1I1GU-2326-SM-CGQFB 0 B1 2 pieces; 10% fibrovascular content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 355 932 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992972 665661 0.977626 0.994568 0.819778 25743 1 76 0.00379778 385 0 1.9977e+08 0.0221114 3.25623e+06 2.00862e+08 1.44724e+07 25799 9.9572e+07 0 0.157848 0.994568 0.815326 1.9977e+08 0.00364538 4.41183e+07 2.11886e+07 4.44683e+07 418 4.45276e+07 3.10614e+07 0.00372583 4.43005e+07 49.8722 0.0162113 0.996164 0 50.1975 GTEX-1I1GV-0004-SM-AG5YW B1 Blood Whole Blood 0013756 1095 BP-58680 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/08/2014 LCSET-8095 12/12/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1GV-0005-SM-AHZ27 B1 7 Blood Whole Blood 0013756 1095 BP-58679 RNA isolation_PAXgene Blood RNA (Manual) 12/08/2014 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.968001 357978 0.978608 0.970534 0.799679 17198 1 76 0.00206938 100 0 6.55132e+07 0.0205935 235404 6.75022e+07 2.71555e+06 17203 3.25178e+07 0 0.178929 0.970534 0.776116 6.55132e+07 0.00363492 1.53622e+07 9.35961e+07 1.55138e+07 118 1.55976e+07 1.6718e+07 0.0028501 1.54682e+07 49.7917 0.00348735 0.973067 0 50.2455 GTEX-1I1GV-0011-R10a-SM-CE6S6 B1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 855 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98991 366715 0.966534 0.991428 0.841415 22553 1 76 0.00781397 125 0 5.95509e+07 0.033134 2.93613e+06 6.00658e+07 8.92044e+06 22565 2.96306e+07 0 0.12512 0.991428 0.834202 5.95509e+07 0.00755416 1.30575e+07 8.72459e+06 1.32212e+07 143 1.32589e+07 6.39196e+06 0.00768426 1.30904e+07 49.6803 0.0488819 0.992946 0 50.3115 GTEX-1I1GV-0011-R11a-SM-CJI3Z B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 855 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992017 1.73155e+06 0.946243 0.993269 0.745855 25171 1 76 0.00226899 375 0 1.40281e+08 0.0532421 1.98222e+06 1.41232e+08 8.90716e+06 25218 6.98173e+07 0 0.200388 0.993269 0.740835 1.40281e+08 0.002668 3.0169e+07 3.15547e+07 3.04726e+07 337 3.07176e+07 1.89099e+07 0.00246824 3.00831e+07 49.4783 0.0140352 0.994521 0 50.2503 GTEX-1I1GV-0011-R1a-SM-CL559 B1, A1 5.9 Brain Brain - Hippocampus 0001954 855 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993241 609907 0.966797 0.994972 0.838102 24156 1 76 0.0026961 373 0 1.28882e+08 0.0329873 1.33737e+07 1.29533e+08 1.41166e+07 24188 6.41985e+07 0 0.128695 0.994972 0.833888 1.28882e+08 0.00431237 2.81034e+07 3.23699e+07 2.88442e+07 403 2.86694e+07 1.04114e+07 0.00350283 2.84519e+07 49.8097 0.103245 0.996702 0 50.6504 GTEX-1I1GV-0011-R2a-SM-ARZLF B1, A1 6 Brain Brain - Substantia nigra 0002038 855 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987118 892468 0.961856 0.989534 0.797178 22637 1 76 0.0027339 141 0 6.03511e+07 0.0378261 3.61534e+06 6.09894e+07 2.75206e+06 22655 2.99108e+07 0 0.164678 0.989534 0.788835 6.03511e+07 0.00380037 1.30258e+07 1.80976e+07 1.32918e+07 155 1.35471e+07 7.2069e+06 0.00326584 1.28891e+07 48.7554 0.0592781 0.99195 0 50.5054 GTEX-1I1GV-0011-R3a-SM-CL557 B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 855 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992121 599746 0.96584 0.993967 0.84456 24260 1 76 0.00266967 370 0 1.20521e+08 0.0339422 1.10425e+07 1.21253e+08 1.40914e+07 24275 6.00224e+07 0 0.12128 0.993967 0.839465 1.20521e+08 0.00436297 2.62205e+07 2.9183e+07 2.67967e+07 383 2.67248e+07 8.90035e+06 0.00351475 2.64733e+07 49.7636 0.0910696 0.995813 0 50.5435 GTEX-1I1GV-0011-R5b-SM-CKZPD B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 855 BP-71786 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990815 519036 0.968888 0.993026 0.844966 22745 1 76 0.00239796 267 0 9.77015e+07 0.0309119 8.84458e+06 9.83876e+07 9.77518e+06 22764 4.86615e+07 0 0.123923 0.993026 0.839073 9.77015e+07 0.00354125 2.1087e+07 2.99805e+07 2.19189e+07 325 2.18358e+07 7.54793e+06 0.00296833 2.13394e+07 49.4251 0.0898953 0.995237 0 50.9672 GTEX-1I1GV-0011-R6b-SM-ARU6Q B1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 855 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992712 531946 0.963441 0.994006 0.827587 23908 1 76 0.00218625 268 0 8.42411e+07 0.0360647 3.49932e+06 8.47491e+07 2.82724e+06 23931 4.19615e+07 0 0.135854 0.994006 0.822626 8.42411e+07 0.00284799 1.84116e+07 1.28185e+07 1.85783e+07 266 1.85888e+07 1.12278e+07 0.00251668 1.84961e+07 49.875 0.0412903 0.9953 0 50.2254 GTEX-1I1GV-0011-R7a-SM-ARU6R B1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 855 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135,LCSET-8681 02/23/2016 TruSeq.v1 RNASEQ 0.9925 915764 0.968314 0.993945 0.823222 25428 1 76 0.00224243 376 0 1.5402e+08 0.0313714 9.73493e+06 1.54958e+08 9.75259e+06 25463 7.67286e+07 0 0.145092 0.993945 0.818237 1.5402e+08 0.00315165 3.37861e+07 4.3463e+07 3.38377e+07 363 3.39199e+07 1.64863e+07 0.00269638 3.38917e+07 49.9792 0.0628229 0.995389 0 50.0382 GTEX-1I1GV-0011-R9b-SM-ARZLE B1, A1 5.6 Brain Brain - Spinal cord (cervical c-1) 0006469 855 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.98649 629221 0.962939 0.988832 0.803523 20713 1 76 0.00287242 208 0 6.79554e+07 0.0369025 6.02532e+06 6.87229e+07 2.88816e+06 20726 3.37263e+07 0 0.159415 0.988832 0.794549 6.79554e+07 0.0040129 1.42725e+07 3.47418e+07 1.51293e+07 208 1.49637e+07 5.5289e+06 0.00344131 1.45457e+07 49.2918 0.0876756 0.991173 0 51.4571 GTEX-1I1GV-0126-SM-CL55G 0 B1 2 pieces, ~10-15% adipose tissue, rep delineated 7.7 Muscle Muscle - Skeletal 0011907 1137 568 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993736 417805 0.981725 0.995208 0.864885 19957 1 76 0.00245659 149 0 7.99184e+07 0.0180706 805833 8.03031e+07 1.08018e+07 19969 3.98158e+07 0 0.11684 0.995208 0.860741 7.99184e+07 0.00343112 1.73043e+07 6.60681e+06 1.75636e+07 172 1.76295e+07 1.73858e+07 0.00294313 1.73472e+07 49.5965 0.0100349 0.996681 0 50.3719 GTEX-1I1GV-0226-SM-CM2TH 0 B1 2 pieces, ~40% interstitial/adherent fat; rep delineated 6.3 Nerve Nerve - Tibial 0001323 1139 566 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992227 211238 0.964035 0.993518 0.715801 25417 1 76 0.00214384 213 0 9.43381e+07 0.0356938 432335 9.49536e+07 5.46155e+06 25467 4.69754e+07 0 0.248234 0.993518 0.711161 9.43381e+07 0.00306383 2.06613e+07 8.91586e+06 2.07384e+07 233 2.07615e+07 1.29029e+07 0.00260324 2.07561e+07 49.9935 0.00455312 0.994808 0 50.0932 GTEX-1I1GV-0326-SM-ARL7L 0 B1 2 pieces, ~50-60% occlusive atherosis; rep delineated; no adherent fat 6.6 Blood Vessel Artery - Tibial 0007610 1141 564 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.990632 855649 0.960789 0.99068 0.721397 23024 1 76 0.002185 123 0 6.35503e+07 0.0388875 211129 6.41482e+07 4.06936e+06 23052 3.15573e+07 0 0.239392 0.99068 0.714674 6.35503e+07 0.00275253 1.37382e+07 1.11808e+07 1.37472e+07 135 1.39945e+07 9.79337e+06 0.00246875 1.35049e+07 49.1098 0.00329127 0.990727 0 50.0162 GTEX-1I1GV-0426-SM-ARZLX 0 B1 2 pieces, ~10% fascia, peripheral nerve, or vascular elements; rep. delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1141 564 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986678 479793 0.971141 0.988536 0.762191 23174 1 76 0.00253026 131 0 5.89135e+07 0.0284768 235543 5.95967e+07 2.86553e+06 23203 2.92188e+07 0 0.20895 0.988536 0.753453 5.89135e+07 0.00392061 1.28236e+07 5.8015e+06 1.3088e+07 131 1.33375e+07 9.76292e+06 0.00322413 1.26734e+07 48.7234 0.00395228 0.990393 0 50.5104 GTEX-1I1GV-0526-SM-A9G29 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~50-60 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1142 563 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984389 194220 0.972447 0.989921 0.806533 22821 1 76 0.00411598 185 0 6.67867e+07 0.0273464 598003 6.74667e+07 6.46903e+06 22847 3.31336e+07 0 0.165914 0.989921 0.798404 6.67867e+07 0.00441851 1.43823e+07 9.46994e+06 1.46656e+07 153 1.47631e+07 9.74637e+06 0.00426442 1.46205e+07 49.7574 0.00886368 0.995454 0 50.4875 GTEX-1I1GV-0626-SM-ARL7M 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~50-60 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1187 518 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991775 912698 0.971918 0.992327 0.741916 22854 1 76 0.00194763 148 0 5.98738e+07 0.0277989 212174 6.03368e+07 3.15616e+06 22883 2.9749e+07 0 0.230002 0.992327 0.736223 5.98738e+07 0.00256089 1.31982e+07 7.2555e+06 1.3137e+07 131 1.3449e+07 9.94233e+06 0.00225409 1.29201e+07 48.9971 0.0035165 0.992878 0 49.8839 GTEX-1I1GV-0726-SM-ARZLY 1 B1 2 pieces; nodular goiter with regressive changes 7.6 Thyroid Thyroid 0002046 1189 516 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136,LCSET-8682 02/23/2016 TruSeq.v1 RNASEQ 0.988494 1.14748e+06 0.966079 0.989307 0.756553 26292 1 76 0.00232962 281 0 1.21154e+08 0.0334606 285122 1.22464e+08 7.03375e+06 26366 6.01058e+07 0 0.209526 0.989307 0.748463 1.21154e+08 0.00322203 2.63039e+07 1.26571e+07 2.67793e+07 320 2.73568e+07 2.27248e+07 0.00277546 2.58231e+07 48.558 0.00232821 0.990119 0 50.4478 GTEX-1I1GV-0926-SM-B2LXM 2 B1 2 pieces, moderate- marked congestion, focal chronic pneumonitis 6 Lung Lung 0008952 1195 510 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.988956 334385 0.964711 0.990586 0.720569 25526 1 76 0.00266409 149 0 7.63674e+07 0.0349631 283754 7.70931e+07 3.76816e+06 25563 3.79628e+07 0 0.244141 0.990586 0.713786 7.63674e+07 0.00424144 1.67053e+07 7.81628e+06 1.6819e+07 171 1.68221e+07 1.02502e+07 0.00345147 1.68225e+07 50.0006 0.00368066 0.992217 0 50.1696 GTEX-1I1GV-1026-SM-A8N8D 1 B1 2 pieces, macrovesicular steatosis involves ~60-70% of parenchyma; moderate passive congestion 6.2 Liver Liver 0001114 1196 509 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986819 470046 0.961755 0.98929 0.815951 23081 1 76 0.011054 152 0 8.09954e+07 0.038122 1.71466e+06 8.18722e+07 1.44218e+07 23096 4.02655e+07 0 0.145804 0.98929 0.807213 8.09954e+07 0.0113648 1.72445e+07 2.30266e+07 1.78325e+07 181 1.78193e+07 9.33989e+06 0.011209 1.74171e+07 49.4293 0.0209432 0.991761 0 50.8382 GTEX-1I1GV-1326-SM-A96SE 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic changes. 6.2 Heart Heart - Left Ventricle 0006566 1201 504 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993873 155631 0.985306 0.995214 0.865563 20207 1 76 0.00232234 261 0 8.78747e+07 0.0146223 6.62974e+06 8.82973e+07 2.77862e+06 20214 4.38209e+07 0 0.119743 0.995214 0.86142 8.78747e+07 0.00279025 1.95274e+07 2.24292e+07 1.99676e+07 329 2.00103e+07 5.36664e+06 0.00255598 1.95792e+07 49.4555 0.0750843 0.996554 0 50.5573 GTEX-1I1GV-1426-SM-B2LXN 1 B1 2 pieces, no abnormalities; ~30-40% interstitial fat, rep. delineated 6.5 Heart Heart - Atrial Appendage 0006631 1203 502 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991859 234195 0.974569 0.993526 0.803507 22940 1 76 0.00271545 191 0 7.65382e+07 0.0251131 3.03482e+06 7.70369e+07 3.44612e+06 22964 3.81035e+07 0 0.171061 0.993526 0.798306 7.65382e+07 0.00383797 1.66919e+07 8.88604e+06 1.70197e+07 214 1.69644e+07 8.47008e+06 0.00327577 1.68478e+07 49.8276 0.0393944 0.995194 0 50.4862 GTEX-1I1GV-1826-SM-CNNR8 2 B1 2 pieces, cortex 5.9 Adrenal Gland Adrenal Gland 0002369 1212 493 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991755 508889 0.9626 0.993926 0.815706 23243 1 76 0.00265943 267 0 9.28465e+07 0.037253 4.76053e+06 9.34139e+07 1.02781e+07 23271 4.62421e+07 0 0.146895 0.993926 0.810752 9.28465e+07 0.0039146 2.00603e+07 2.13989e+07 2.06774e+07 329 2.07112e+07 8.64284e+06 0.00328564 2.02155e+07 49.3944 0.0509617 0.996098 0 50.7574 GTEX-1I1GV-1926-SM-CNPQH 2 B1 2 pieces, glandular elements with hyperplastic pattern, variably but generally moderately autolyzed 6.4 Prostate Prostate 0002367 1217 488 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983488 183484 0.965591 0.986728 0.78413 24582 1 76 0.00608789 132 0 7.02001e+07 0.0342168 1.65799e+06 7.11443e+07 1.8778e+07 24613 3.48808e+07 0 0.181461 0.986728 0.773723 7.02001e+07 0.00875883 1.53233e+07 9.45706e+06 1.5701e+07 159 1.57357e+07 7.73288e+06 0.00741897 1.55027e+07 49.6271 0.0233047 0.989969 0 50.6087 GTEX-1I1GV-2026-SM-CNPQI 1 B1 6 pieces, confirmed target muscularis; myenteric plexus ganglion cells well-seen; rep encircled 5.7 Esophagus Esophagus - Muscularis 0004648 1220 485 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983092 195380 0.970564 0.986655 0.824529 24053 1 76 0.00596757 369 0 1.05457e+08 0.0293024 3.91922e+06 1.06884e+08 2.68787e+07 24082 5.24043e+07 0 0.146035 0.986655 0.813526 1.05457e+08 0.00929692 2.28474e+07 1.56615e+07 2.35298e+07 358 2.35813e+07 9.68936e+06 0.00762623 2.31314e+07 49.5184 0.0366682 0.990219 0 50.7357 GTEX-1I1GV-2226-SM-ARU7E 1 B1 6 pieces, squamous mucosa up to ~0.35mm, ~15-20% thickness; prominent submucosal mucus glands present; rep delineated 6.1 Esophagus Esophagus - Mucosa 0006920 1225 480 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993558 248707 0.973196 0.994632 0.81135 22351 1 76 0.00217789 137 0 6.409e+07 0.0266042 598684 6.4436e+07 2.32769e+06 22369 3.19409e+07 0 0.161845 0.994632 0.806995 6.409e+07 0.00281461 1.43413e+07 6.86372e+06 1.44959e+07 164 1.44908e+07 9.47694e+06 0.00249591 1.44099e+07 49.8601 0.00929115 0.995706 0 50.2681 GTEX-1I1GV-2426-SM-CGQFM 1 B1 2 pieces, mainly fibroadipose elements; a few ductal elements, rep delinetaed; focal gynecomastoid hyperplasia 6 Breast Breast - Mammary Tissue 0008367 1230 475 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990269 415147 0.975175 0.992142 0.802015 26202 1 76 0.00385032 523 0 1.62647e+08 0.0245194 1.39559e+06 1.63935e+08 1.1899e+07 26270 8.09837e+07 0 0.17316 0.992142 0.795713 1.62647e+08 0.00410454 3.59023e+07 1.71092e+07 3.63317e+07 451 3.6268e+07 2.20995e+07 0.00397041 3.62026e+07 49.9549 0.00851306 0.994014 0 50.2972 GTEX-1I1GV-2526-SM-B2LXL 2 B1 2 pieces, spermatogenesisis present 5.5 Testis Testis 0000473 1231 474 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.988792 577771 0.912454 0.990736 0.69936 33096 1 76 0.00239685 167 0 8.05801e+07 0.0872111 868737 8.13335e+07 3.20861e+06 33160 4.00935e+07 0 0.213093 0.990736 0.692882 8.05801e+07 0.00395619 1.63177e+07 1.1197e+07 1.64044e+07 158 1.64692e+07 1.23294e+07 0.00317499 1.6386e+07 49.8734 0.0106812 0.992681 0 50.1324 GTEX-1I1GV-2926-SM-C1YS9 1 B1 1 piece; mainly adenohypophysis; ~3.5mm nodule of neurohypophysis, delineated 6.9 Pituitary Pituitary 0000007 1340 365 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988321 681493 0.959154 0.990981 0.755228 26199 1 76 0.00199676 272 0 1.00824e+08 0.0405997 537459 1.01741e+08 4.91457e+06 26247 5.01282e+07 0 0.203926 0.990981 0.748416 1.00824e+08 0.00250894 2.16418e+07 1.06528e+07 2.06825e+07 295 2.07352e+07 1.56792e+07 0.00225216 2.18257e+07 51.2811 0.0052826 0.993641 0 48.8667 GTEX-1I1GV-3026-SM-CNNR9 1 B1 4 pieces, no abnormalities 7.5 Brain Brain - Cerebellum 0002037 1341 364 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990338 863865 0.941234 0.992579 0.716549 25929 1 76 0.00257692 273 0 1.40994e+08 0.0583681 2.12674e+06 1.42048e+08 1.46693e+07 25979 7.01648e+07 0 0.224685 0.992579 0.711232 1.40994e+08 0.00369223 3.02255e+07 3.68457e+07 3.05724e+07 321 3.0683e+07 1.69715e+07 0.00313331 3.03999e+07 49.7683 0.0149719 0.99482 0 50.2853 GTEX-1I1GV-3126-SM-A96SF 1 B1 3 pieces, no abnormalities 6.3 Brain Brain - Cortex 0001870 1344 361 BP-64349 RNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993441 338079 0.968399 0.99494 0.837817 23396 1 76 0.00213782 268 0 8.87244e+07 0.0313397 5.38955e+06 8.91756e+07 2.97163e+06 23415 4.42188e+07 0 0.130582 0.99494 0.833577 8.87244e+07 0.0025115 1.94297e+07 1.90749e+07 1.97206e+07 297 1.97052e+07 8.19405e+06 0.00232438 1.95575e+07 49.8119 0.0604375 0.99644 0 50.3715 GTEX-1I1HK-0001-SM-DC69N B1 Blood Whole Blood 0013756 1042 BP-58879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I1HK-0005-SM-ARZL8 B1 9.3 Blood Whole Blood 0013756 1042 BP-58880 RNA isolation_PAXgene Blood RNA (Manual) 12/12/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.977526 2.23376e+06 0.902264 0.980818 0.67197 19522 1 76 0.00268672 102 0 5.83663e+07 0.0972314 217407 5.95078e+07 2.53535e+06 19538 2.87866e+07 0 0.230294 0.980818 0.659081 5.83663e+07 0.00436433 1.2245e+07 8.04542e+07 1.2511e+07 113 1.29591e+07 1.13634e+07 0.00352271 1.20326e+07 48.1466 0.00365342 0.984111 0 50.5372 GTEX-1I1HK-0011-R10b-SM-CJI3M B1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 964 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992845 1.29441e+06 0.968965 0.994157 0.842819 24906 1 76 0.00210914 374 0 1.23996e+08 0.0303697 4.4023e+06 1.24724e+08 7.71277e+06 24933 6.17064e+07 0 0.126146 0.994157 0.837895 1.23996e+08 0.00246708 2.70543e+07 2.03239e+07 2.75442e+07 354 2.77402e+07 1.79137e+07 0.00228788 2.69949e+07 49.3192 0.0352962 0.99547 0 50.4486 GTEX-1I1HK-0011-R11a-SM-B2LVN B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 964 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990339 923786 0.951922 0.992241 0.755082 23758 1 76 0.00273241 270 0 9.56439e+07 0.0476329 1.95899e+06 9.63918e+07 4.16883e+06 23787 4.75573e+07 0 0.19684 0.992241 0.749224 9.56439e+07 0.00377742 2.07168e+07 1.21864e+07 2.08742e+07 285 2.09889e+07 1.15332e+07 0.00325391 2.0761e+07 49.7271 0.0203232 0.994143 0 50.1892 GTEX-1I1HK-0011-R1b-SM-CM2T7 B1, A1 5.8 Brain Brain - Hippocampus 0001954 964 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992717 489129 0.962893 0.994411 0.830119 23652 1 76 0.00224845 267 0 8.03478e+07 0.0368957 6.18305e+06 8.07993e+07 4.79136e+06 23672 4.00065e+07 0 0.132773 0.994411 0.82548 8.03478e+07 0.00319193 1.74646e+07 1.82674e+07 1.78248e+07 324 1.77246e+07 6.33944e+06 0.00271939 1.76825e+07 49.9405 0.0765235 0.996105 0 50.5104 GTEX-1I1HK-0011-R5b-SM-ARU6S B1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 964 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992339 544190 0.96554 0.993693 0.815371 23778 1 76 0.00230411 266 0 8.87138e+07 0.0342302 6.26672e+06 8.92769e+07 3.04204e+06 23807 4.41963e+07 0 0.150169 0.993693 0.810228 8.87138e+07 0.00285999 1.92216e+07 2.75196e+07 1.9566e+07 301 1.94791e+07 7.50264e+06 0.00258167 1.94049e+07 49.9046 0.0701943 0.995046 0 50.4441 GTEX-1I1HK-0011-R6b-SM-CM2T9 B1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 964 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992583 504759 0.963013 0.994468 0.839529 23559 1 76 0.00221539 375 0 1.02906e+08 0.0368259 8.39189e+06 1.03478e+08 6.37131e+06 23578 5.12404e+07 0 0.123483 0.994468 0.834885 1.02906e+08 0.00332141 2.24303e+07 2.10824e+07 2.29293e+07 387 2.27301e+07 8.40329e+06 0.00276735 2.27969e+07 50.0733 0.0810979 0.996353 0 50.55 GTEX-1I1HK-0011-R8b-SM-E8VN9 B1, A1 6.2 Brain Brain - Hypothalamus 0001898 964 BP-71793 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986907 755493 0.963304 0.988738 0.831054 24186 1 76 0.00200412 370 0 9.75197e+07 0.0364778 7.78769e+06 9.86305e+07 4.97598e+06 24208 4.85356e+07 0 0.13225 0.988738 0.821695 9.75197e+07 0.00267469 2.11809e+07 2.41279e+07 2.17863e+07 393 2.15596e+07 7.97408e+06 0.00233879 2.15698e+07 50.0119 0.0789582 0.990569 0 50.7046 GTEX-1I1HK-0011-R9a-SM-CMKHK B1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 964 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993941 823764 0.950836 0.995108 0.79714 24451 1 76 0.0022484 386 0 9.56892e+07 0.0489032 4.29169e+06 9.61596e+07 6.76707e+06 24477 4.76738e+07 0 0.153696 0.995108 0.79324 9.56892e+07 0.0032087 2.08397e+07 2.28547e+07 2.12317e+07 341 2.11108e+07 1.14852e+07 0.00272799 2.10823e+07 49.9662 0.0446309 0.996275 0 50.4659 GTEX-1I1HK-0126-SM-COH49 1 B1 6 pieces; includes from 5-15% internal fat, epidermis measures 33 microns, solar elastosis 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1004 1113 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99182 232835 0.966947 0.993188 0.76111 24649 1 76 0.00354733 163 0 7.41665e+07 0.0328503 501864 7.46752e+07 7.56161e+06 24675 3.69417e+07 0 0.205837 0.993188 0.755925 7.41665e+07 0.00457127 1.61741e+07 7.12699e+06 1.62548e+07 169 1.62394e+07 1.08047e+07 0.0040586 1.62877e+07 50.0742 0.00672063 0.994555 0 50.1243 GTEX-1I1HK-0226-SM-COH4A 1 B1 2 pieces; 25 and 70% fat, remainder is fibrous/vascular/nerve 7 Adipose Tissue Adipose - Subcutaneous 0002190 1006 1111 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992522 194723 0.972319 0.993802 0.817145 23058 1 76 0.00355065 160 0 7.08723e+07 0.0273995 332165 7.13143e+07 7.76734e+06 23083 3.53117e+07 0 0.155174 0.993802 0.812081 7.08723e+07 0.00430873 1.55489e+07 6.46287e+06 1.56384e+07 168 1.56234e+07 1.19992e+07 0.0039292 1.56535e+07 50.0481 0.00465776 0.995082 0 50.1436 GTEX-1I1HK-0326-SM-ACKW5 1 B1 2 pieces; skeletal muscle with 10 and 15% fat 8.5 Muscle Muscle - Skeletal 0011907 1008 1109 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992865 320215 0.982767 0.994736 0.870864 21137 1 76 0.00260898 272 0 1.20356e+08 0.0169717 1.58494e+06 1.20993e+08 1.6676e+07 21149 5.99591e+07 0 0.111903 0.994736 0.86628 1.20356e+08 0.00344784 2.59026e+07 1.73134e+07 2.61744e+07 312 2.62092e+07 2.37167e+07 0.00302762 2.60663e+07 49.8633 0.0130995 0.996608 0 50.261 GTEX-1I1HK-0426-SM-ADEHV 1 B1 2 pieces; nerve with minimal attachment of fat 7 Nerve Nerve - Tibial 0001323 1010 1107 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981277 574969 0.963965 0.98783 0.731388 25679 1 76 0.00365673 287 0 1.04916e+08 0.0357317 536699 1.06208e+08 1.23005e+07 25732 5.19495e+07 0 0.232576 0.98783 0.722487 1.04916e+08 0.0034476 2.27392e+07 1.03287e+07 2.30847e+07 275 2.338e+07 1.51291e+07 0.00355286 2.30586e+07 49.654 0.00505326 0.994383 0 50.377 GTEX-1I1HK-0526-SM-COH4B 1 B1 2 pieces; well trimmed, mild intimal thickening/plaque 6.9 Blood Vessel Artery - Tibial 0007610 1013 1104 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992252 221184 0.969243 0.993489 0.827887 22359 1 76 0.00356827 173 0 7.72306e+07 0.0304437 587544 7.77367e+07 8.42483e+06 22381 3.84695e+07 0 0.141356 0.993489 0.822497 7.72306e+07 0.00427613 1.6591e+07 8.678e+06 1.67559e+07 188 1.66964e+07 1.31218e+07 0.00392176 1.67468e+07 50.0752 0.00755813 0.994727 0 50.2472 GTEX-1I1HK-0626-SM-CNPQM 1 B1 2 pieces; includes ~10% internal fat 6.7 Heart Heart - Atrial Appendage 0006631 1085 1032 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985548 312314 0.974088 0.988663 0.791787 23441 1 76 0.00579763 149 0 8.1549e+07 0.0257134 3.51868e+06 8.24841e+07 2.04087e+07 23469 4.05317e+07 0 0.182301 0.988663 0.78281 8.1549e+07 0.00845247 1.75073e+07 1.17278e+07 1.79414e+07 181 1.80071e+07 9.93154e+06 0.00712087 1.76637e+07 49.5186 0.0426589 0.991777 0 50.6123 GTEX-1I1HK-0726-SM-B2LY4 1 B1 2 pieces; both include ~10% attached fat, small amount of internal/perivascular fat, patchy areas of scar in one piece 6.9 Heart Heart - Left Ventricle 0006566 1087 1030 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990616 625904 0.978614 0.992742 0.813024 22314 1 76 0.00254111 191 0 8.01735e+07 0.0212148 3.79221e+06 8.07597e+07 3.44035e+06 22331 3.98796e+07 0 0.16559 0.992742 0.807122 8.01735e+07 0.004067 1.78503e+07 9.18068e+06 1.80265e+07 215 1.81377e+07 1.07096e+07 0.00330242 1.78903e+07 49.6567 0.0469567 0.994868 0 50.2455 GTEX-1I1HK-0926-SM-B2LVY 1 B1 6 pieces; atherosclerosis 7.6 Blood Vessel Artery - Aorta 0001496 1093 1024 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990094 391194 0.973015 0.991721 0.746748 22696 1 76 0.00275288 132 0 6.26577e+07 0.0265402 124057 6.31808e+07 2.95245e+06 22722 3.11427e+07 0 0.226267 0.991721 0.740565 6.26577e+07 0.00403249 1.36285e+07 4.92032e+06 1.3667e+07 138 1.37108e+07 1.04045e+07 0.00339163 1.36849e+07 49.9527 0.00196352 0.993348 0 50.0706 GTEX-1I1HK-1126-SM-AHZ2L 1 B1 2 pieces; congestion, bridging fibrosis/early cirrhosis, patchy mild chronic inflammation 5.9 Liver Liver 0001114 1106 1011 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989245 339098 0.974285 0.990717 0.796418 22563 1 76 0.0070264 265 0 1.09968e+08 0.0255964 2.38739e+06 1.10998e+08 1.90684e+07 22593 5.47497e+07 0 0.177867 0.990717 0.789025 1.09968e+08 0.00854438 2.39435e+07 2.08669e+07 2.44509e+07 303 2.44372e+07 1.25372e+07 0.00778426 2.40971e+07 49.6497 0.0215084 0.99219 0 50.5243 GTEX-1I1HK-2026-SM-CNNRB 2 B1 6 pieces; partially autolyzed mucosa, submucosa (target is full thickness) 5.9 Stomach Stomach 0000945 1154 963 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.955543 197100 0.989505 0.957536 0.881004 21631 1 76 0.00223738 622 0 1.19881e+08 0.0099371 1.33337e+06 1.25197e+08 1.38162e+07 21648 5.9636e+07 0 0.108501 0.957536 0.843593 1.19881e+08 0.00341059 2.84506e+07 2.59042e+08 2.88302e+07 484 2.89276e+07 3.86124e+07 0.00282276 2.8603e+07 49.7179 0.0106501 0.959529 0 50.3314 GTEX-1I1HK-2326-SM-CKZOH 1 B1 6 pieces; include up to 50% attached fat, incomplete sections (?poor fixation) 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1171 946 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990577 295192 0.971809 0.992822 0.761123 24906 1 76 0.00217733 171 0 7.97622e+07 0.0279899 643236 8.03389e+07 7.94309e+06 24946 3.96999e+07 0 0.210686 0.992822 0.75566 7.97622e+07 0.00355921 1.74707e+07 9.4754e+06 1.76382e+07 185 1.76577e+07 1.20601e+07 0.00286671 1.76178e+07 49.9434 0.00800653 0.995066 0 50.2385 GTEX-1I1HK-2426-SM-ADEHX 1 B1 2 pieces; minimal fat with several ducts, some gynecomastoid features 7.2 Breast Breast - Mammary Tissue 0008367 1180 937 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981666 389563 0.968403 0.988079 0.741197 26912 1 76 0.00357798 282 0 1.11063e+08 0.0312704 595880 1.12403e+08 1.26467e+07 26968 5.50278e+07 0 0.227206 0.988079 0.732362 1.11063e+08 0.00343034 2.41988e+07 1.17788e+07 2.45549e+07 274 2.48488e+07 1.70882e+07 0.00350464 2.45385e+07 49.6858 0.00530127 0.994492 0 50.3652 GTEX-1I1HK-2526-SM-A96SM 1 B1 2 pieces; good representation of salivary gland elements with some admixed fat and small portion of attached stroma/nerve/vessels, chronic sialadenitis 8.4 Salivary Gland Minor Salivary Gland 0006330 1167 950 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.98929 390817 0.97243 0.990676 0.783441 25021 1 76 0.00242694 305 0 9.37525e+07 0.0258125 250051 9.46349e+07 3.2474e+06 25055 4.66368e+07 0 0.188989 0.990676 0.776136 9.37525e+07 0.00266129 2.11617e+07 2.16528e+07 2.13506e+07 276 2.141e+07 1.57063e+07 0.00254395 2.12274e+07 49.7859 0.00264227 0.992061 0 50.2221 GTEX-1I1HK-2626-SM-ARU7I 2 B1 1 piece; 40% adenohypophysis, 30% neurohypophysis, remainder is dura/vessels/hemorrhage 5.8 Pituitary Pituitary 0000007 1236 881 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.99115 203623 0.964443 0.992317 0.727925 24679 1 76 0.00232018 115 0 5.39519e+07 0.0353276 792562 5.43697e+07 2.09973e+06 24711 2.68649e+07 0 0.236518 0.992317 0.722332 5.39519e+07 0.00303887 1.1657e+07 6.26374e+06 1.18155e+07 129 1.18162e+07 6.7337e+06 0.0026791 1.17166e+07 49.7883 0.0145773 0.993483 0 50.3375 GTEX-1I1HK-2726-SM-AHZ2M 1 B1 2 pieces (fragmented), mild to moderate autolysis, purkinje cells well visualized, significant attachment of meninges 6.7 Brain Brain - Cerebellum 0002037 1244 873 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98566 1.6859e+06 0.903551 0.98739 0.660515 25319 1 76 0.00700166 198 0 1.01932e+08 0.0960967 2.39937e+06 1.03234e+08 1.8432e+07 25370 5.07026e+07 0 0.243036 0.98739 0.652186 1.01932e+08 0.00866078 2.09098e+07 7.00197e+07 2.13353e+07 206 2.13113e+07 9.49504e+06 0.00782977 2.11109e+07 49.7639 0.023242 0.98912 0 50.5036 GTEX-1I1HK-2826-SM-CKZPL 1 B1 2 pieces; more white matter than usual 6.1 Brain Brain - Cortex 0001870 1246 871 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991744 256868 0.96846 0.99376 0.828255 24122 1 76 0.00208509 271 0 9.64549e+07 0.0312788 5.55515e+06 9.70606e+07 8.3967e+06 24140 4.80508e+07 0 0.140204 0.99376 0.823087 9.64549e+07 0.0033624 2.10822e+07 1.51489e+07 2.15008e+07 318 2.1349e+07 9.41199e+06 0.00272245 2.13936e+07 50.0521 0.0572338 0.995776 0 50.4914 GTEX-1I4MK-0002-SM-EZ6M9 B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -112 BP-59920 RNA isolation_Trizol Manual (Cell Pellet) 01/23/2015 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991782 775389 0.968564 0.993362 0.828581 22246 1 76 0.00248542 287 0 1.16904e+08 0.0309254 617053 1.17685e+08 9.24904e+06 22287 5.82317e+07 0 0.139983 0.993362 0.823081 1.16904e+08 0.0033532 2.59646e+07 1.84208e+07 2.60878e+07 289 2.61556e+07 2.84733e+07 0.00291862 2.60758e+07 49.9235 0.00524325 0.994942 0 50.1183 GTEX-1I4MK-0004-SM-DC69Q B1 Blood Whole Blood 0013756 -112 BP-58879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I4MK-0004-SM-DCCZN B1 Blood Whole Blood 0013756 -112 BP-58879 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1I4MK-0006-SM-A96RI B1 9.3 Blood Whole Blood 0013756 -112 BP-58880 RNA isolation_PAXgene Blood RNA (Manual) 12/12/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.984799 1.31846e+06 0.958959 0.985858 0.796709 17281 1 76 0.00200057 115 0 9.58566e+07 0.0403782 181664 9.72316e+07 3.18952e+06 17288 4.77543e+07 0 0.162251 0.985858 0.785442 9.58566e+07 0.00238099 2.20644e+07 1.31951e+08 2.2135e+07 160 2.22023e+07 2.511e+07 0.00219058 2.21343e+07 49.9233 0.00186836 0.986918 0 50.0799 GTEX-1I4MK-0126-SM-CY8G6 1 B1 6 severely fragmented pieces; 25% subcutaneous fat in 3 pieces 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 178 621 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.98954 357670 0.967289 0.99149 0.738121 24582 1 76 0.00470442 175 0 8.42356e+07 0.0325387 811384 8.49586e+07 1.05103e+07 24620 4.19082e+07 0 0.229168 0.99149 0.73184 8.42356e+07 0.00739739 1.8512e+07 8.83908e+06 1.86704e+07 180 1.86787e+07 1.14747e+07 0.00604826 1.86593e+07 49.9739 0.00955035 0.99344 0 50.213 GTEX-1I4MK-0326-SM-B2LWP 1 B1 2 pieces; pigmented macrophages in alveoli and lymphoid nodules; no fibrosis; delicate alveolar walls 8.3 Lung Lung 0008952 198 601 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991084 821520 0.973658 0.992841 0.791941 24684 1 76 0.00236607 279 0 1.00896e+08 0.0259805 480897 1.01624e+08 3.77880e+06 24718 5.02175e+07 0 0.181717 0.992841 0.786272 1.00896e+08 0.0037447 2.24379e+07 8.23284e+06 2.25262e+07 278 2.26447e+07 1.80417e+07 0.00305416 2.24837e+07 49.8216 0.00473212 0.994598 0 50.0983 GTEX-1I4MK-0426-SM-B2LWQ 1 B1 6 pieces; mild chronic esophagitis; focal surface desquamation 9.2 Esophagus Esophagus - Mucosa 0006920 206 593 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992192 553917 0.978023 0.993656 0.834439 23390 1 76 0.00237586 284 0 1.10776e+08 0.0215787 493092 1.11483e+08 4.63432e+06 23415 5.51681e+07 0 0.143584 0.993656 0.829145 1.10776e+08 0.00345001 2.50269e+07 1.40123e+07 2.51876e+07 301 2.52914e+07 2.33506e+07 0.00291214 2.50746e+07 49.7847 0.00442301 0.995119 0 50.16 GTEX-1I4MK-0526-SM-ARL7N 1 B1 6 pieces; well dissected muscularis 7.9 Esophagus Esophagus - Muscularis 0004648 209 590 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.99321 675510 0.974507 0.993324 0.821211 20660 1 76 0.00159574 128 0 5.2406e+07 0.0252263 523466 5.27582e+07 3.02695e+06 20675 2.60518e+07 0 0.153296 0.993324 0.815729 5.2406e+07 0.00212052 1.13416e+07 5.2674e+06 1.13248e+07 133 1.15014e+07 8.80906e+06 0.0018581 1.11683e+07 49.2654 0.00992199 0.993439 0 49.9631 GTEX-1I4MK-0626-SM-ARZLZ 1 B1 6 pieces, 2 have prominent fibroatheromatous plaques 8.2 Blood Vessel Artery - Aorta 0001496 218 581 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985955 1.4482e+06 0.975489 0.987465 0.831663 21806 1 76 0.00239336 134 0 6.59925e+07 0.0240386 161406 6.68302e+07 3.16388e+06 21824 3.26597e+07 0 0.143826 0.987465 0.821239 6.59925e+07 0.00359135 1.43562e+07 5.12195e+06 1.43813e+07 141 1.49834e+07 1.39007e+07 0.00299144 1.38481e+07 48.0311 0.00241516 0.988975 0 50.0437 GTEX-1I4MK-0726-SM-ACKWC 0 B1 2 pieces; <5% fibrous content 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 221 578 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991778 285106 0.977254 0.993275 0.828278 24037 1 76 0.0025627 281 0 1.13373e+08 0.0224651 1.16903e+06 1.14141e+08 1.54689e+07 24067 5.64888e+07 0 0.148976 0.993275 0.822708 1.13373e+08 0.00324823 2.49347e+07 1.37837e+07 2.51721e+07 324 2.51424e+07 1.88322e+07 0.00290495 2.51181e+07 49.9758 0.010242 0.994772 0 50.2368 GTEX-1I4MK-0826-SM-A9G2J 1 B1 6 pieces, 3 of which have 50% extraneous fibrovascular & fatty tissue [circled] 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 221 578 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988509 182379 0.97793 0.992572 0.851336 22043 1 76 0.00367163 224 0 8.2861e+07 0.0217316 864600 8.34811e+07 7.62426e+06 22058 4.11791e+07 0 0.126594 0.992572 0.845012 8.2861e+07 0.00338801 1.78808e+07 7.56482e+06 1.81606e+07 238 1.82226e+07 1.45198e+07 0.00353226 1.81112e+07 49.8467 0.0103568 0.996635 0 50.3881 GTEX-1I4MK-0926-SM-A9SLD 1 B1 6 pieces; several focal superficial erosions 7.6 Stomach Stomach 0000945 223 576 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7847,LCSET-8171 11/17/2015 TruSeq.v1 RNASEQ 0.985054 751774 0.97599 0.989417 0.812753 24637 1 76 0.00321182 312 0 1.02013e+08 0.0236855 716979 1.03104e+08 9.42162e+06 24670 5.06139e+07 0 0.163237 0.989417 0.804152 1.02013e+08 0.00409398 2.28543e+07 4.00361e+07 2.29618e+07 275 2.31324e+07 2.11818e+07 0.00365095 2.30926e+07 49.957 0.00695395 0.993779 0 50.1173 GTEX-1I4MK-1026-SM-AHZ2H 0 B1 2 pieces; 10% external and internal fat; plentiful endocrine islets 7.4 Pancreas Pancreas 0001150 226 573 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.992228 532533 0.976166 0.994427 0.837386 23131 1 76 0.00205128 271 0 1.31913e+08 0.0235503 365876 1.32652e+08 5.17646e+06 23161 6.56776e+07 0 0.13878 0.994427 0.832719 1.31913e+08 0.00285965 3.02024e+07 3.3831e+07 3.05083e+07 276 3.052e+07 3.76446e+07 0.00245457 3.04868e+07 49.9728 0.00275816 0.996625 0 50.2519 GTEX-1I4MK-1126-SM-B2LWS 1 B1 6 pieces, 1 without mucosa 7.1 Colon Colon - Transverse 0001157 234 565 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990589 690345 0.974705 0.992596 0.824649 23723 1 76 0.00255713 279 0 9.20789e+07 0.0238768 1.15476e+06 9.27657e+07 3.71636e+06 23748 4.57604e+07 0 0.150055 0.992596 0.818544 9.20789e+07 0.00404562 2.04691e+07 1.07164e+07 2.06428e+07 288 2.07088e+07 1.46106e+07 0.00329987 2.05615e+07 49.8215 0.0124482 0.994603 0 50.2113 GTEX-1I4MK-1326-SM-B2LWT 1 B1 2 pieces; very well dissected glands 7.3 Salivary Gland Minor Salivary Gland 0006330 241 558 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991023 668579 0.97275 0.992735 0.780559 24493 1 76 0.00243351 217 0 8.99158e+07 0.0268978 431480 9.05738e+07 3.82588e+06 24519 4.47485e+07 0 0.192191 0.992735 0.774889 8.99158e+07 0.00351757 2.00227e+07 1.10497e+07 2.0219e+07 226 2.02998e+07 1.48287e+07 0.0029746 2.00867e+07 49.7362 0.00476385 0.994448 0 50.2439 GTEX-1I4MK-1426-SM-B2LWU 0 B1 2 pieces; small amount of proliferative endometrium [labeled] in each piece 8.4 Uterus Uterus 0000995 246 553 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991225 837674 0.971708 0.993144 0.789271 23263 1 76 0.00221064 165 0 8.12009e+07 0.0280162 198665 8.17614e+07 3.46252e+06 23290 4.03901e+07 0 0.182438 0.993144 0.78386 8.12009e+07 0.00365322 1.7929e+07 7.1377e+06 1.80184e+07 179 1.81423e+07 1.49607e+07 0.00293054 1.79531e+07 49.738 0.00242981 0.995063 0 50.1243 GTEX-1I4MK-1526-SM-CE6T1 0 B1 2 pieces; 20 & 40% external fibrovascular stroma 8.5 Ovary Ovary 0000992 246 553 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988892 379837 0.973875 0.99054 0.802755 22520 1 76 0.00754776 135 0 6.82556e+07 0.0258445 172403 6.89075e+07 1.07426e+07 22541 3.39576e+07 0 0.171121 0.99054 0.79516 6.82556e+07 0.00790155 1.51763e+07 6.81935e+06 1.5191e+07 132 1.52749e+07 1.34266e+07 0.00772436 1.52063e+07 49.8875 0.00250195 0.992187 0 50.0241 GTEX-1I4MK-1626-SM-CM2TJ 1 B1 2 pieces; ductal-lobular units present 6.4 Breast Breast - Mammary Tissue 0008367 248 551 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993262 218962 0.972067 0.994465 0.788047 24248 1 76 0.00185823 211 0 8.71842e+07 0.0275662 509259 8.76694e+07 4.7443e+06 24282 4.34351e+07 0 0.18402 0.994465 0.783685 8.71842e+07 0.00279508 1.91782e+07 7.90759e+06 1.92447e+07 226 1.92554e+07 1.42637e+07 0.00232609 1.92687e+07 50.0173 0.00580885 0.995668 0 50.0866 GTEX-1I4MK-1726-SM-ARL7O 1 B1 6 pieces; 1 has no epithelium (in this cut) 8.2 Vagina Vagina 0000996 253 546 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.993917 1.02741e+06 0.972809 0.994058 0.807151 22642 1 76 0.0016909 145 0 6.77991e+07 0.0268785 212474 6.82044e+07 2.90079e+06 22669 3.37192e+07 0 0.165657 0.994058 0.802355 6.77991e+07 0.00215737 1.48981e+07 5.77046e+06 1.47798e+07 156 1.50557e+07 1.27068e+07 0.0019241 1.4632e+07 49.2865 0.00311525 0.994199 0 49.8007 GTEX-1I4MK-1926-SM-B2LVQ 0 B1 2 pieces; 10% internal & external fat 8 Nerve Nerve - Tibial 0001323 356 443 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.99195 451024 0.969692 0.993559 0.774211 23148 1 76 0.0022826 177 0 6.94096e+07 0.0299898 273846 6.98595e+07 2.91604e+06 23180 3.45408e+07 0 0.195481 0.993559 0.769225 6.94096e+07 0.00371201 1.5324e+07 5.17518e+06 1.54058e+07 164 1.54398e+07 1.16277e+07 0.00299615 1.53961e+07 49.9291 0.00391995 0.995168 0 50.1331 GTEX-1I4MK-2026-SM-B2LVR 0 B1 2 pieces; <5% fibrous content 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 358 441 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.9928 384154 0.979507 0.994387 0.839767 21904 1 76 0.00214635 212 0 8.56701e+07 0.0201527 578066 8.61537e+07 3.4238e+06 21927 4.26516e+07 0 0.13974 0.994387 0.835053 8.56701e+07 0.00371465 1.89182e+07 6.51784e+06 1.90301e+07 236 1.90567e+07 1.50643e+07 0.00292925 1.90208e+07 49.9528 0.00670971 0.995974 0 50.1474 GTEX-1I4MK-2126-SM-ADEI9 0 B1 2 pieces; essentially free of plaque 7.9 Blood Vessel Artery - Tibial 0007610 356 443 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982432 619939 0.976092 0.989082 0.85899 23043 1 76 0.00302111 386 0 1.54507e+08 0.0234226 753228 1.56212e+08 1.50287e+07 23072 7.65526e+07 0 0.117102 0.989082 0.849611 1.54507e+08 0.00361 3.29831e+07 1.29982e+07 3.33474e+07 347 3.37462e+07 3.19681e+07 0.00331357 3.34886e+07 49.8085 0.00482183 0.995733 0 50.2746 GTEX-1I4MK-2226-SM-ACKWD 1 B1 6 pieces; well trimmed; 5% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 358 441 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992072 174015 0.975322 0.99377 0.830418 21876 1 76 0.00268199 203 0 6.15025e+07 0.0244057 394108 6.18881e+07 8.43458e+06 21893 3.0632e+07 0 0.144905 0.99377 0.825244 6.15025e+07 0.00382966 1.33488e+07 6.82327e+06 1.34545e+07 150 1.34676e+07 1.12014e+07 0.00325485 1.34353e+07 49.94 0.00636808 0.995469 0 50.1972 GTEX-1I4MK-2326-SM-ADEHR 1 B1 2 pieces; 5% internal fat 8.2 Muscle Muscle - Skeletal 0011907 359 440 BP-64391 RNA Extraction from Paxgene-derived Lysate Plate Based 06/11/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.983408 397696 0.98579 0.989742 0.881499 19806 1 76 0.00297315 281 0 1.13276e+08 0.0139587 1.50170e+06 1.1445e+08 1.26771e+07 19815 5.61631e+07 0 0.104291 0.989742 0.872456 1.13276e+08 0.00269449 2.45221e+07 2.47784e+07 2.50948e+07 323 2.52859e+07 2.13267e+07 0.00283472 2.49393e+07 49.6549 0.013121 0.996076 0 50.5772 GTEX-1I6K6-0003-SM-DC69H B1 Blood Whole Blood 0013756 -26 BP-58927 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/15/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I6K6-0006-SM-ARZLA B1 9.1 Blood Whole Blood 0013756 -26 BP-58918 RNA isolation_PAXgene Blood RNA (Manual) 12/15/2014 LCSET-8136,LCSET-8682 02/23/2016 TruSeq.v1 RNASEQ 0.980453 5.9641e+06 0.867231 0.982647 0.66816 20878 1 76 0.00228374 151 0 1.068e+08 0.131992 537384 1.08686e+08 6.13306e+06 20907 5.27919e+07 0 0.199071 0.982647 0.656565 1.068e+08 0.00355229 2.10715e+07 1.49295e+08 2.14512e+07 172 2.21116e+07 1.84025e+07 0.0029166 2.07924e+07 48.4626 0.00494439 0.984841 0 50.4464 GTEX-1I6K6-0126-SM-A9SLE 0 B1 6 pieces; include up to ~10% mostly internal fat, epidermis measures 34 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 404 1189 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847,LCSET-8171 11/17/2015 TruSeq.v1 RNASEQ 0.986836 475059 0.972067 0.990975 0.800693 25139 1 76 0.00329362 305 0 1.08384e+08 0.0276649 1.06212e+06 1.09371e+08 1.0137e+07 25176 5.38486e+07 0 0.171374 0.990975 0.793467 1.08384e+08 0.00421905 2.37188e+07 1.25181e+07 2.39221e+07 312 2.40613e+07 1.91798e+07 0.0037544 2.39863e+07 49.922 0.00971114 0.995114 0 50.2134 GTEX-1I6K6-0226-SM-ADEID 0 B1 2 pieces; 80 and 60% fat, remainder is fibrous/nerve/vessel/tendon 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 400 1193 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982463 464901 0.976766 0.988984 0.807014 23729 1 76 0.00328301 286 0 1.0888e+08 0.0228693 623564 1.10093e+08 1.16913e+07 23769 5.39551e+07 0 0.169752 0.988984 0.798124 1.0888e+08 0.00327842 2.38271e+07 9.86524e+06 2.40599e+07 284 2.43668e+07 2.09376e+07 0.00328073 2.41611e+07 49.7881 0.00566397 0.995506 0 50.2431 GTEX-1I6K6-0326-SM-CJI4A 0 B1 2 pieces; skeletal muscle with trivial fat 8.4 Muscle Muscle - Skeletal 0011907 414 1179 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.994011 945161 0.985941 0.995147 0.890954 20371 1 76 0.00181607 381 0 1.23312e+08 0.0138252 3.79663e+06 1.23913e+08 7.07474e+06 20382 6.14416e+07 0 0.0949869 0.995147 0.88663 1.23312e+08 0.00233154 2.68675e+07 1.48886e+07 2.73534e+07 344 2.74626e+07 2.68233e+07 0.00207352 2.6876e+07 49.4602 0.0306394 0.996283 0 50.4481 GTEX-1I6K6-0426-SM-CM2TN 0 B1 2 pieces; essentially well trimmed nerve with <10% attached fat 6.9 Nerve Nerve - Tibial 0001323 408 1185 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993146 265556 0.968178 0.994326 0.754304 24284 1 76 0.00209132 181 0 8.5612e+07 0.0315406 365741 8.61005e+07 5.47584e+06 24335 4.2637e+07 0 0.213874 0.994326 0.750024 8.5612e+07 0.00282638 1.88375e+07 6.81246e+06 1.89037e+07 202 1.89253e+07 1.345e+07 0.00245841 1.89138e+07 49.9849 0.00424784 0.995506 0 50.0877 GTEX-1I6K6-0526-SM-B2LVZ 0 B1 2 pieces; essentially well trimmed 8.5 Blood Vessel Artery - Tibial 0007610 409 1184 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992359 701717 0.976076 0.993986 0.833402 21340 1 76 0.00225561 172 0 7.99301e+07 0.0234393 270920 8.04137e+07 3.13322e+06 21359 3.97701e+07 0 0.142674 0.993986 0.828389 7.99301e+07 0.00366047 1.73668e+07 4.85575e+06 1.74562e+07 183 1.75348e+07 1.59456e+07 0.00295689 1.74109e+07 49.8228 0.00336908 0.995613 0 50.1284 GTEX-1I6K6-0626-SM-ARU7J 0 B1 2 pieces; well trimmed 7.8 Salivary Gland Minor Salivary Gland 0006330 421 1172 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991485 482893 0.971405 0.992701 0.784989 23946 1 76 0.00236748 222 0 8.49569e+07 0.0276946 335763 8.55815e+07 2.87438e+06 23984 4.22872e+07 0 0.186417 0.992701 0.779259 8.49569e+07 0.00302375 1.90469e+07 1.37339e+07 1.91963e+07 215 1.93009e+07 1.47883e+07 0.00269521 1.90391e+07 49.6586 0.00392331 0.993918 0 50.1953 GTEX-1I6K6-0726-SM-B2LX4 0 B1 2 pieces; moderate to severe Hashimoto thyroiditis 6.9 Thyroid Thyroid 0002046 428 1165 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.987563 625994 0.959619 0.989358 0.707383 25035 1 76 0.00347449 135 0 7.49453e+07 0.0379164 202438 7.57515e+07 3.45446e+06 25074 3.71657e+07 0 0.252236 0.989358 0.699855 7.49453e+07 0.00467072 1.64758e+07 1.21502e+07 1.65462e+07 153 1.66714e+07 1.02641e+07 0.00407152 1.64821e+07 49.7145 0.0026724 0.991152 0 50.1067 GTEX-1I6K6-0826-SM-ARL7Z 0 B1 2 pieces; fat and dense fibrous stroma, no ductal elements in this section 7.6 Breast Breast - Mammary Tissue 0008367 434 1159 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.987446 390311 0.976537 0.987458 0.846788 21196 1 76 0.00179109 139 0 6.00124e+07 0.0230896 201691 6.07747e+07 3.71964e+06 21211 2.987e+07 0 0.129749 0.987458 0.836168 6.00124e+07 0.00226963 1.3246e+07 6.40445e+06 1.3268e+07 144 1.33772e+07 1.24391e+07 0.00203036 1.31394e+07 49.5515 0.00331867 0.987471 0 50.0415 GTEX-1I6K6-0926-SM-AHZ2N 0 B1 2 pieces; atelectasis, focus of mild acute inflammatory cell infiltrate 8 Lung Lung 0008952 446 1147 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988549 246163 0.973618 0.989901 0.809391 23423 1 76 0.00697587 123 0 6.72946e+07 0.0259104 343965 6.79812e+07 1.14801e+07 23439 3.3489e+07 0 0.164226 0.989901 0.801217 6.72946e+07 0.0083298 1.49053e+07 6.36505e+06 1.50681e+07 136 1.50426e+07 1.12567e+07 0.00765191 1.50153e+07 49.9546 0.00505971 0.991253 0 50.2717 GTEX-1I6K6-1126-SM-A8N8O 1 B1 2 pieces 7.2 Pancreas Pancreas 0001150 437 1156 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985953 362770 0.974472 0.988458 0.821549 24040 1 76 0.0110051 131 0 1.03633e+08 0.0251528 361900 1.04844e+08 1.91912e+07 24069 5.15086e+07 0 0.152923 0.988458 0.812067 1.03633e+08 0.0110036 2.34027e+07 2.72358e+07 2.38412e+07 146 2.37793e+07 2.68832e+07 0.0110044 2.37232e+07 49.941 0.00345181 0.990964 0 50.4641 GTEX-1I6K6-1226-SM-A8N8P 1 B1 6 pieces 9.6 Esophagus Esophagus - Mucosa 0006920 457 1136 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983656 393740 0.976772 0.985949 0.830583 24200 1 76 0.0107975 222 0 1.08961e+08 0.0225999 608618 1.10514e+08 1.93532e+07 24224 5.41545e+07 0 0.146189 0.985949 0.818912 1.08961e+08 0.010934 2.44785e+07 1.95776e+07 2.46762e+07 242 2.47801e+07 2.26711e+07 0.0108656 2.46265e+07 49.8446 0.00550716 0.988242 0 50.2011 GTEX-1I6K6-1326-SM-ARZM7 1 B1 6 pieces; target muscularis 8.6 Esophagus Esophagus - Muscularis 0004648 461 1132 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989648 667890 0.975385 0.991605 0.819732 21772 1 76 0.00241546 151 0 6.85646e+07 0.0242984 430910 6.9145e+07 3.09463e+06 21790 3.4047e+07 0 0.155653 0.991605 0.812851 6.85646e+07 0.00347901 1.48332e+07 6.46338e+06 1.50278e+07 156 1.52152e+07 1.25244e+07 0.00294619 1.4764e+07 49.2476 0.00623197 0.993562 0 50.3258 GTEX-1I6K6-1526-SM-CGQFC 0 B1 2 pieces; lobulated mature fat with small fibrous component 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 470 1123 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.957251 759241 0.963205 0.960095 0.807052 26121 1 76 0.00474246 381 0 1.60537e+08 0.0350419 999005 1.67209e+08 1.1622e+07 26169 7.95389e+07 0 0.156153 0.960095 0.774846 1.60537e+08 0.00471722 3.50241e+07 3.425e+07 3.53772e+07 417 3.5386e+07 2.52604e+07 0.00473055 3.52903e+07 49.9323 0.00597459 0.962939 0 50.2508 GTEX-1I6K6-1726-SM-CGQFD 1 B1 6 pieces; well trimmed, <10% internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 469 1124 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993049 447656 0.971867 0.994676 0.795634 27629 1 76 0.00369068 395 0 1.7447e+08 0.0279012 1.61139e+06 1.75404e+08 1.26664e+07 27709 8.69436e+07 0 0.176233 0.994676 0.791398 1.7447e+08 0.00362476 3.85222e+07 1.72409e+07 3.87922e+07 416 3.87706e+07 2.81971e+07 0.00365953 3.87682e+07 49.9985 0.00918675 0.996302 0 50.1746 GTEX-1I6K6-1826-SM-B2LX5 2 B1 6 pieces; full thickness sections, mild to moderate mucosal autolysis 6.1 Colon Colon - Transverse 0001157 496 1097 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989827 524692 0.970884 0.991867 0.788559 23584 1 76 0.00274911 149 0 6.43239e+07 0.0287365 924775 6.48513e+07 3.34174e+06 23611 3.19715e+07 0 0.182325 0.991867 0.782146 6.43239e+07 0.00386203 1.41879e+07 6.88878e+06 1.43692e+07 162 1.44228e+07 8.6239e+06 0.00330442 1.42508e+07 49.7001 0.0142599 0.993908 0 50.3175 GTEX-1I6K6-1926-SM-A96SN 1 B1 6 pieces; 3 include strips of mucosa, ~30% fat also present in several pieces 7.4 Colon Colon - Sigmoid 0001159 506 1087 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992351 288512 0.975829 0.993776 0.827544 22747 1 76 0.00194107 184 0 7.18508e+07 0.0237641 460644 7.23008e+07 2.42949e+06 22769 3.58016e+07 0 0.148285 0.993776 0.822394 7.18508e+07 0.00241161 1.58146e+07 6.17004e+06 1.59382e+07 184 1.59364e+07 1.25593e+07 0.002176 1.59087e+07 49.9564 0.00637122 0.995201 0 50.1946 GTEX-1I6K6-2026-SM-CGQFE 1 B1 6 pieces; target muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 474 1119 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993501 545378 0.975805 0.995193 0.826941 25039 1 76 0.00362701 393 0 1.79101e+08 0.0239184 1.28058e+06 1.79966e+08 1.23893e+07 25084 8.92506e+07 0 0.148865 0.995193 0.822965 1.79101e+08 0.00369822 3.88825e+07 1.55406e+07 3.92633e+07 418 3.91959e+07 2.89138e+07 0.00366065 3.91762e+07 49.9874 0.00711569 0.996884 0 50.2436 GTEX-1I6K6-2126-SM-B2LX6 1 B1 2 pieces; prostatic urethra at one edge of one piece 6.3 Prostate Prostate 0002367 499 1094 BP-69050 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990664 485274 0.964001 0.992433 0.750505 24940 1 76 0.00257207 153 0 7.53452e+07 0.0358083 537860 7.59197e+07 3.62984e+06 24979 3.74798e+07 0 0.213496 0.992433 0.744825 7.53452e+07 0.00407585 1.64917e+07 6.87969e+06 1.66631e+07 177 1.66662e+07 9.83755e+06 0.00332262 1.66148e+07 49.9227 0.00708459 0.994201 0 50.2585 GTEX-1I6K6-2226-SM-A8N8Q 1 B1 2 pieces; spermatogenesis is active 6.7 Testis Testis 0000473 495 1098 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984584 498751 0.919505 0.986771 0.706282 34923 1 76 0.0112716 226 0 1.17396e+08 0.080155 1.03839e+06 1.18969e+08 2.26587e+07 34998 5.83523e+07 0 0.213223 0.986771 0.696939 1.17396e+08 0.0104876 2.41937e+07 1.98799e+07 2.44399e+07 236 2.45594e+07 1.81019e+07 0.0108805 2.43089e+07 49.7437 0.00872817 0.988959 0 50.2532 GTEX-1I6K7-0003-SM-DC69I B1 Blood Whole Blood 0013756 -26 BP-58927 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/15/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1I6K7-0003-SM-DCCZI B1 Blood Whole Blood 0013756 -26 BP-58927 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/15/2014 LCSET-10154,LCSET-10534 01/28/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1I6K7-0005-SM-ARL72 B1 8.3 Blood Whole Blood 0013756 -26 BP-59118 RNA isolation_PAXgene Blood RNA (Manual) 12/19/2014 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.988344 998680 0.964049 0.988636 0.817258 18023 1 76 0.00205183 116 0 7.53838e+07 0.0355974 308255 7.62503e+07 3.28336e+06 18031 3.74513e+07 0 0.146791 0.988636 0.80797 7.53838e+07 0.00260308 1.69828e+07 5.77417e+07 1.69956e+07 142 1.72556e+07 1.81189e+07 0.00232738 1.676e+07 49.2716 0.00404267 0.988928 0 50.0187 GTEX-1I6K7-0226-SM-CJI46 0 B1 2 pieces; 10% fibrous content 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 159 1225 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.9921 1.07467e+06 0.97496 0.993421 0.798791 23123 1 76 0.00202849 171 0 8.23633e+07 0.024749 383304 8.29088e+07 5.0899e+06 23153 4.09949e+07 0 0.176169 0.993421 0.793536 8.23633e+07 0.00248013 1.81373e+07 7.07044e+06 1.82487e+07 193 1.83363e+07 1.4855e+07 0.00225401 1.81515e+07 49.7468 0.0046232 0.994741 0 50.1531 GTEX-1I6K7-0326-SM-B2LXO 0 B1 2 pieces; 10% internal fat content 8.8 Muscle Muscle - Skeletal 0011907 161 1223 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.993047 638187 0.986018 0.994587 0.880521 20440 1 76 0.00196009 273 0 1.14965e+08 0.0137329 1.43815e+06 1.15591e+08 3.79038e+06 20450 5.72616e+07 0 0.105497 0.994587 0.875755 1.14965e+08 0.00319688 2.49016e+07 1.59999e+07 2.51188e+07 325 2.51693e+07 2.23962e+07 0.00257753 2.50038e+07 49.8351 0.0124417 0.996128 0 50.2171 GTEX-1I6K7-0426-SM-CGQFN 0 B1 2 pieces; 1 mmsq external fibrous nodule 7.5 Nerve Nerve - Tibial 0001323 171 1213 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992496 674549 0.968236 0.994054 0.761923 27036 1 76 0.00372009 403 0 1.76918e+08 0.0314719 814318 1.77976e+08 1.21328e+07 27119 8.81519e+07 0 0.206313 0.994054 0.757392 1.76918e+08 0.00350713 3.8934e+07 1.60553e+07 3.92188e+07 401 3.92525e+07 2.73041e+07 0.00361951 3.91066e+07 49.9069 0.00457543 0.995611 0 50.1822 GTEX-1I6K7-0526-SM-ARL7P 0 B1 2 pieces: 1 well trimmed, other with 60% fatty, neural and fibrous stroma 8.3 Blood Vessel Artery - Tibial 0007610 174 1210 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.993499 1.43645e+06 0.975706 0.993611 0.842712 21354 1 76 0.0016335 158 0 7.36107e+07 0.0238696 337199 7.40841e+07 2.83502e+06 21367 3.65795e+07 0 0.132994 0.993611 0.837327 7.36107e+07 0.00212939 1.60211e+07 6.18928e+06 1.58274e+07 169 1.62191e+07 1.52651e+07 0.00188142 1.56386e+07 49.0889 0.00455157 0.993722 0 49.6958 GTEX-1I6K7-0626-SM-ARL7Q 1 B1 2 pieces; no scars or necrosis; 5% internal fat 9.4 Heart Heart - Left Ventricle 0006566 179 1205 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991682 1.22501e+06 0.98187 0.992324 0.859321 20334 1 76 0.00152059 144 0 6.83037e+07 0.0178268 962035 6.8832e+07 2.84686e+06 20341 3.39079e+07 0 0.122549 0.992324 0.852725 6.83037e+07 0.00204344 1.50956e+07 1.04715e+07 1.50755e+07 172 1.53668e+07 1.30503e+07 0.00178185 1.48357e+07 49.1207 0.0139766 0.992967 0 49.9666 GTEX-1I6K7-0826-SM-ACKWI 1 B1 6 pieces; minimal plaque; up to 1 mm thick fibrofatty adventitia on all 8.6 Blood Vessel Artery - Aorta 0001496 187 1197 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992959 346440 0.979313 0.994564 0.851468 23343 1 76 0.00263706 285 0 1.19578e+08 0.0201218 352728 1.20232e+08 1.57487e+07 23367 5.95504e+07 0 0.127845 0.994564 0.846839 1.19578e+08 0.00359092 2.61688e+07 9.97368e+06 2.63301e+07 314 2.63874e+07 2.54327e+07 0.00311322 2.62996e+07 49.9166 0.00293373 0.996168 0 50.1536 GTEX-1I6K7-0926-SM-A96SV 1 B1 2 pieces; well trimmed with 20% internal fibrous & neural content 8.8 Salivary Gland Minor Salivary Gland 0006330 185 1199 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992489 486426 0.973743 0.993855 0.790437 24327 1 76 0.00203475 210 0 8.30991e+07 0.0255085 326060 8.36129e+07 2.59587e+06 24356 4.13835e+07 0 0.183307 0.993855 0.78558 8.30991e+07 0.00237816 1.85198e+07 8.97717e+06 1.86353e+07 210 1.86662e+07 1.51513e+07 0.00220622 1.85956e+07 49.9053 0.00389964 0.995221 0 50.1554 GTEX-1I6K7-1026-SM-A9SLK 1 B1 2 pieces; fibrofatty tissue with several mammary ducts 8.4 Breast Breast - Mammary Tissue 0008367 195 1189 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989973 436983 0.968744 0.991431 0.770342 26187 1 76 0.00659618 280 0 1.1068e+08 0.0309785 620370 1.11636e+08 2.03054e+07 26231 5.51162e+07 0 0.198402 0.991431 0.763741 1.1068e+08 0.00753829 2.43167e+07 1.13926e+07 2.45093e+07 261 2.45458e+07 1.83324e+07 0.00706654 2.44269e+07 49.8787 0.00555706 0.99289 0 50.1972 GTEX-1I6K7-1126-SM-A96SW 1 B1 2 pieces; well dissected; no extraneous tissue 8.1 Thyroid Thyroid 0002046 199 1185 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992199 341104 0.966607 0.99355 0.754384 24551 1 76 0.00197124 206 0 9.19061e+07 0.0330751 401611 9.25027e+07 3.2143e+06 24598 4.58043e+07 0 0.212223 0.99355 0.749518 9.19061e+07 0.00220004 2.01446e+07 8.16993e+06 2.02531e+07 249 2.02709e+07 1.56761e+07 0.00208549 2.02392e+07 49.9609 0.00434161 0.994902 0 50.1342 GTEX-1I6K7-1226-SM-B2LVS 1 B1 2 pieces; moderate number of pigmented alveolar macrophages; 2 large veins in 1 piece 9.2 Lung Lung 0008952 203 1181 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991183 803102 0.975911 0.993107 0.803894 23522 1 76 0.00255915 153 0 7.49218e+07 0.0237199 467844 7.54418e+07 3.16278e+06 23547 3.72566e+07 0 0.172017 0.993107 0.798353 7.49218e+07 0.00394203 1.67067e+07 5.69376e+06 1.67916e+07 172 1.68944e+07 1.36898e+07 0.00324925 1.67383e+07 49.7679 0.00620139 0.99503 0 50.1266 GTEX-1I6K7-1326-SM-ARZM1 1 B1 6 pieces; well dissected with up to 10% fibrous content 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 212 1172 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988923 1.06649e+06 0.971966 0.991319 0.795127 23202 1 76 0.00238061 151 0 7.07915e+07 0.0276561 457173 7.14114e+07 2.77322e+06 23221 3.51484e+07 0 0.176839 0.991319 0.788224 7.07915e+07 0.00349255 1.54826e+07 6.97939e+06 1.55635e+07 152 1.57627e+07 1.34024e+07 0.00293524 1.54367e+07 49.4776 0.00640196 0.993715 0 50.1302 GTEX-1I6K7-1426-SM-B2LXP 1 B1 6 pieces; well dissected; mild chronic inflammation with squamous hyperplasia; 1 submucosal gland 9.5 Esophagus Esophagus - Mucosa 0006920 223 1161 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.990769 726767 0.978759 0.992371 0.839734 23664 1 76 0.00257942 285 0 1.14119e+08 0.0205673 445074 1.14996e+08 4.81126e+06 23694 5.67997e+07 0 0.139025 0.992371 0.833327 1.14119e+08 0.00356699 2.57356e+07 1.63249e+07 2.59116e+07 291 2.60348e+07 2.42065e+07 0.00307241 2.5786e+07 49.7599 0.00387034 0.993972 0 50.1704 GTEX-1I6K7-1526-SM-A96SX 1 B1 6 pieces; well dissected except for 2 small squamous remnants up to 1 mm [labeled] 8.8 Esophagus Esophagus - Muscularis 0004648 225 1159 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992721 309594 0.978346 0.993955 0.843567 22257 1 76 0.00187501 277 0 9.00178e+07 0.0213352 863401 9.05652e+07 3.26658e+06 22274 4.4869e+07 0 0.134779 0.993955 0.838468 9.00178e+07 0.00196804 1.95012e+07 7.42871e+06 1.96866e+07 263 1.96506e+07 1.62733e+07 0.00192147 1.96368e+07 49.9824 0.00953347 0.99519 0 50.2366 GTEX-1I6K7-1726-SM-B2LXQ 1 B1 6 pieces; well preserved mucosa and fatty submucosa; no muscularis propria 7.3 Stomach Stomach 0000945 233 1151 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.985103 504990 0.978993 0.987258 0.824064 23385 1 76 0.00228708 359 0 9.71127e+07 0.020667 1.2706e+06 9.83661e+07 3.76377e+06 23410 4.82796e+07 0 0.15493 0.987258 0.813563 9.71127e+07 0.00372711 2.22644e+07 8.50222e+07 2.24793e+07 287 2.25813e+07 2.35655e+07 0.00300552 2.23633e+07 49.7575 0.0129171 0.989412 0 50.2401 GTEX-1I6K7-1826-SM-CGQFO 1 B1 2 pieces; 10% & 5% fibrous content 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 234 1150 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992626 897785 0.97656 0.994489 0.833315 25558 1 76 0.0036805 522 0 1.7321e+08 0.0231874 1.98807e+06 1.7417e+08 1.26567e+07 25606 8.62948e+07 0 0.143245 0.994489 0.828722 1.7321e+08 0.0035552 3.80736e+07 1.67691e+07 3.86882e+07 458 3.85695e+07 2.56219e+07 0.00362132 3.84341e+07 49.9121 0.0114146 0.996351 0 50.4004 GTEX-1I6K7-1926-SM-B2LXR 0 B1 6 pieces; well dissected; numerous hair follicles (up to 9 per piece) 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 238 1146 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992233 578462 0.971592 0.993766 0.803779 25785 1 76 0.00238876 297 0 1.03584e+08 0.0281376 698030 1.04234e+08 4.25876e+06 25818 5.1581e+07 0 0.167813 0.993766 0.798769 1.03584e+08 0.00346614 2.28127e+07 1.06641e+07 2.30074e+07 285 2.30557e+07 1.91139e+07 0.00292662 2.29129e+07 49.8446 0.00669674 0.9953 0 50.2124 GTEX-1I6K7-2326-SM-ARZM2 1 B1 2 pieces; hyperplastic glands; 20% external fat on 1 piece 7.4 Prostate Prostate 0002367 272 1112 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989293 501607 0.966939 0.991227 0.771712 22872 1 76 0.00242382 127 0 6.48338e+07 0.0328054 413166 6.54077e+07 2.85288e+06 22900 3.22009e+07 0 0.195227 0.991227 0.764941 6.48338e+07 0.00362906 1.38704e+07 6.44085e+06 1.41411e+07 146 1.42424e+07 9.89714e+06 0.00302526 1.38839e+07 49.3628 0.00631678 0.993161 0 50.4832 GTEX-1I6K7-2426-SM-AHZ2I 1 B1 2 fragmented pieces; active spermatogenesis 7.3 Testis Testis 0000473 267 1117 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.990124 608952 0.923978 0.992179 0.710061 34756 1 76 0.00189048 293 0 1.17409e+08 0.0756554 943195 1.18335e+08 4.41756e+06 34837 5.84557e+07 0 0.213917 0.992179 0.704507 1.17409e+08 0.0026539 2.41662e+07 1.56681e+07 2.41916e+07 284 2.4302e+07 1.94611e+07 0.0022714 2.4266e+07 49.963 0.00797058 0.994234 0 50.0262 GTEX-1I6K7-5004-SM-AN47E B1 Muscle Muscle - Skeletal 0011907 162 ChIP-Seq GTEX-1ICG6-0004-SM-DC69L B1 Blood Whole Blood 0013756 -29 BP-59121 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1ICG6-0004-SM-DCCZF B1 Blood Whole Blood 0013756 -29 BP-59121 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1ICG6-0006-SM-A96RH B1 8.6 Blood Whole Blood 0013756 -29 BP-59158 RNA isolation_PAXgene Blood RNA (Manual) 12/22/2014 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992011 547132 0.965005 0.993438 0.817774 18258 1 76 0.00253248 134 0 7.47084e+07 0.0341974 322707 7.52018e+07 2.30095e+06 18268 3.72086e+07 0 0.147231 0.993438 0.812408 7.47084e+07 0.00317293 1.64909e+07 3.96889e+07 1.66289e+07 151 1.6682e+07 1.61215e+07 0.00285225 1.65465e+07 49.7961 0.00429121 0.994866 0 50.2084 GTEX-1ICG6-0226-SM-AHZ2P 1 B1 2 pieces; 1 with 50% external adipose tissue, other with 5% 8.7 Adrenal Gland Adrenal Gland 0002369 267 767 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989134 243366 0.972772 0.990798 0.797123 23083 1 76 0.0067776 132 0 6.94223e+07 0.0269507 1.79093e+06 7.00671e+07 1.2651e+07 23108 3.45503e+07 0 0.175649 0.990798 0.789788 6.94223e+07 0.008357 1.52544e+07 9.63298e+06 1.53936e+07 148 1.53445e+07 9.56571e+06 0.00756597 1.53974e+07 50.086 0.0255602 0.992462 0 50.2271 GTEX-1ICG6-0426-SM-ARU7M 1 B1 2 pieces; small foci of scarring 6.6 Thyroid Thyroid 0002046 272 762 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991522 308283 0.964342 0.992691 0.718637 24043 1 76 0.00208137 153 0 7.42948e+07 0.0354308 452121 7.48418e+07 2.74024e+06 24091 3.70221e+07 0 0.245704 0.992691 0.713384 7.42948e+07 0.00267027 1.62122e+07 7.31696e+06 1.6334e+07 171 1.63458e+07 9.59399e+06 0.00237547 1.62751e+07 49.8917 0.00604102 0.993859 0 50.1872 GTEX-1ICG6-0626-SM-ACKWS 1 B1 2 pieces; 1 piece has 0.8mm pericardial fat layer and a vein along 1 side, plus a 1 mm artery within the myocardium [all labeled] 7 Heart Heart - Left Ventricle 0006566 276 758 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.988233 238875 0.985424 0.989401 0.81547 20810 1 76 0.00237862 371 0 1.23152e+08 0.0144928 5.43866e+06 1.24472e+08 1.58309e+07 20822 6.13933e+07 0 0.169954 0.989401 0.806826 1.23152e+08 0.00303809 2.63776e+07 7.08695e+07 2.67e+07 337 2.62534e+07 1.04693e+07 0.00270797 2.69107e+07 50.6182 0.043694 0.990568 0 50.3037 GTEX-1ICG6-0726-SM-B2LY5 0 B1 2 pieces; 30% fibroadipose content 8.3 Heart Heart - Atrial Appendage 0006631 276 758 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992308 538333 0.97678 0.994168 0.833989 22507 1 76 0.00208453 200 0 8.46311e+07 0.0229536 1.64699e+06 8.51275e+07 3.48563e+06 22520 4.21301e+07 0 0.142791 0.994168 0.829125 8.46311e+07 0.00350906 1.81268e+07 7.75729e+06 1.84023e+07 240 1.8321e+07 1.35247e+07 0.00279546 1.83358e+07 50.0202 0.0193473 0.996029 0 50.3772 GTEX-1ICG6-1026-SM-B2LY6 1 B1 2 pieces; most small portal space arteries have prominent mural sclerosis, otherwise no significant changes; could represent localized amyloid or effect of hypertension 8.3 Liver Liver 0001114 282 752 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992189 663707 0.979355 0.994026 0.843333 20907 1 76 0.00234268 158 0 8.50997e+07 0.0203337 892839 8.56112e+07 3.4322e+06 20921 4.23511e+07 0 0.136022 0.994026 0.838295 8.50997e+07 0.00364084 1.83876e+07 1.17026e+07 1.85755e+07 193 1.85929e+07 1.82928e+07 0.00299056 1.85064e+07 49.8835 0.010429 0.995863 0 50.2541 GTEX-1ICG6-1126-SM-ADEIF 1 B1 2 pieces; 1 piece has 30% external fat content; other has 40% external fat with 60% of exocrine parenchyma scarred leaving numerous end0crine islets; PanIN 1b 7.5 Pancreas Pancreas 0001150 284 750 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7849 10/20/2015 TruSeq.v1 EXCLUDE 0.982861 301504 0.977837 0.989478 0.838758 21594 1 76 0.00310994 114 0 5.67633e+07 0.0218702 571825 5.73669e+07 5.87922e+06 21607 2.81267e+07 0 0.139078 0.989478 0.829933 5.67633e+07 0.00335652 1.25523e+07 5.64876e+06 1.27728e+07 138 1.29234e+07 9.6307e+06 0.00323241 1.27378e+07 49.6383 0.00996785 0.996094 0 50.4354 GTEX-1ICG6-1226-SM-A9SLN 1 B1 6 pieces; poorly trimmed with high fat content 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 285 749 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989608 321446 0.968997 0.991259 0.780973 24309 1 76 0.00654758 151 0 7.44272e+07 0.0308055 665862 7.50835e+07 1.35291e+07 24342 3.70544e+07 0 0.188024 0.991259 0.774146 7.44272e+07 0.00793252 1.62618e+07 1.01269e+07 1.64459e+07 152 1.64437e+07 1.08525e+07 0.0072389 1.63785e+07 49.9006 0.00886829 0.99291 0 50.2813 GTEX-1ICG6-1326-SM-ACKWR 1 B1 2 pieces; atrophic ductal and lobular units with 80% fat content 7.7 Breast Breast - Mammary Tissue 0008367 291 743 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992141 285225 0.977825 0.993839 0.828177 23890 1 76 0.00260313 275 0 1.15621e+08 0.0219279 1.21031e+06 1.16337e+08 1.54086e+07 23918 5.7595e+07 0 0.149648 0.993839 0.823074 1.15621e+08 0.00321343 2.55055e+07 2.05323e+07 2.57661e+07 318 2.5705e+07 1.81473e+07 0.00290776 2.57405e+07 50.0345 0.0104035 0.995537 0 50.2541 GTEX-1ICG6-1426-SM-A96T1 1 B1 2 pieces; small focus of atrophic endometrium in 1 piece; mostly myometrium with high vascular content in 1 piece 6.6 Uterus Uterus 0000995 293 741 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991559 320616 0.967154 0.993118 0.750675 23144 1 76 0.00200109 131 0 6.59178e+07 0.0325711 199947 6.63746e+07 2.30981e+06 23175 3.28274e+07 0 0.216479 0.993118 0.745509 6.59178e+07 0.00261476 1.43323e+07 5.32018e+06 1.449e+07 147 1.44738e+07 1.04103e+07 0.00230744 1.44404e+07 49.9422 0.0030124 0.994677 0 50.2734 GTEX-1ICG6-1526-SM-C1YQT 1 B1 2 pieces; atrophic with corpora albicantia and a small cyst; high vascular content in 1 piece 7.7 Ovary Ovary 0000992 295 739 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990035 534410 0.970259 0.992559 0.759869 24917 1 76 0.00176105 277 0 1.04568e+08 0.0294701 205652 1.05352e+08 4.44846e+06 24975 5.20272e+07 0 0.21039 0.992559 0.754215 1.04568e+08 0.00241787 2.29957e+07 9.09175e+06 2.31216e+07 296 2.31679e+07 1.7709e+07 0.00208863 2.31926e+07 50.0267 0.00195205 0.995082 0 50.1365 GTEX-1ICG6-1626-SM-ARL81 1 B1 6 pieces; well preserved epithelium 6.8 Vagina Vagina 0000996 298 736 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992837 552566 0.963698 0.99288 0.711667 23927 1 76 0.00190352 119 0 5.57308e+07 0.0360061 199167 5.61304e+07 3.74647e+06 23961 2.77196e+07 0 0.252031 0.99288 0.7066 5.57308e+07 0.00235509 1.23806e+07 5.95186e+06 1.23287e+07 121 1.25182e+07 8.51073e+06 0.0021293 1.21943e+07 49.3445 0.00354829 0.992922 0 49.8951 GTEX-1ICG6-1726-SM-ARU7K 1 B1 2 pieces; several prominent blood vessels 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 299 735 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993519 262772 0.977516 0.994618 0.841084 22540 1 76 0.00185588 161 0 7.30387e+07 0.0222232 634500 7.34339e+07 2.56856e+06 22564 3.64125e+07 0 0.136432 0.994618 0.836558 7.30387e+07 0.00239095 1.62216e+07 6.73610e+06 1.63998e+07 198 1.6374e+07 1.28567e+07 0.00212312 1.63192e+07 49.9161 0.00864042 0.995718 0 50.2732 GTEX-1ICG6-1826-SM-AHZ2O 1 B1 6 pieces; 5 have full thickness wall; mild basal microcystic glands 6.3 Stomach Stomach 0000945 300 734 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.974151 262076 0.980911 0.9755 0.836808 23303 1 76 0.00638512 369 0 1.08769e+08 0.0185534 1.35852e+06 1.115e+08 2.0261e+07 23326 5.41317e+07 0 0.144102 0.9755 0.816307 1.08769e+08 0.00787241 2.49582e+07 1.29392e+08 2.53231e+07 320 2.52523e+07 2.63778e+07 0.00712774 2.51668e+07 49.9152 0.012184 0.97685 0 50.3628 GTEX-1ICG6-1926-SM-ARU7L 1 B1 6 pieces partially sloughed epithelium 7.1 Esophagus Esophagus - Mucosa 0006920 303 731 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992222 356298 0.97225 0.993559 0.802241 23278 1 76 0.00190949 165 0 7.61038e+07 0.0275096 862013 7.65971e+07 2.549e+06 23299 3.79205e+07 0 0.170008 0.993559 0.797074 7.61038e+07 0.00280282 1.68499e+07 7.8689e+06 1.70239e+07 188 1.70035e+07 1.28899e+07 0.00235555 1.69632e+07 49.9407 0.0112539 0.994897 0 50.2568 GTEX-1ICG6-2026-SM-CE6SX 1 B1 6 pieces; muscle with small amount of submucosa 8.1 Esophagus Esophagus - Muscularis 0004648 306 728 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.988574 496400 0.973925 0.990831 0.813305 23019 1 76 0.00562033 173 0 8.8894e+07 0.0258411 671229 8.97166e+07 1.35067e+07 23043 4.42174e+07 0 0.16062 0.990831 0.805847 8.8894e+07 0.0067538 1.91797e+07 7.78211e+06 1.92452e+07 193 1.92772e+07 1.51049e+07 0.00618578 1.93353e+07 50.0753 0.00748166 0.993087 0 50.0852 GTEX-1ICG6-2126-SM-CE6T2 1 B1 6 pieces; 1 of 6 has squamous mucosa on surface, 10% of content [labeled] 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 307 727 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987558 476227 0.973787 0.989388 0.805723 23081 1 76 0.00758503 149 0 7.56991e+07 0.02596 522923 7.65111e+07 1.22012e+07 23113 3.76356e+07 0 0.168064 0.989388 0.797172 7.56991e+07 0.00809864 1.64367e+07 6.348e+06 1.65406e+07 153 1.65569e+07 1.27025e+07 0.00784136 1.65533e+07 49.9946 0.0068346 0.991217 0 50.1575 GTEX-1ICG6-2226-SM-B2LY7 1 B1 6 pieces; well dissected muscularis with small amount of amount of submucosa 7.9 Colon Colon - Sigmoid 0001159 311 723 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.991694 691600 0.973777 0.993487 0.809504 23238 1 76 0.00229546 171 0 8.0999e+07 0.0259887 557977 8.153e+07 3.46482e+06 23260 4.03028e+07 0 0.164272 0.993487 0.804232 8.0999e+07 0.00355474 1.75944e+07 6.52172e+06 1.77467e+07 202 1.77579e+07 1.34761e+07 0.00292397 1.77196e+07 49.9459 0.00684382 0.995279 0 50.2155 GTEX-1ICG6-2526-SM-CGQFZ 1 B1 6 pieces; half are poorly trimmed with fat and several large arteries; 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 359 675 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992285 864390 0.972471 0.994198 0.82058 26548 1 76 0.00372438 485 0 1.55011e+08 0.0272729 690682 1.55915e+08 1.10696e+07 26603 7.72105e+07 0 0.151891 0.994198 0.815819 1.55011e+08 0.00360885 3.36877e+07 1.61659e+07 3.39852e+07 433 3.39544e+07 2.5285e+07 0.00366981 3.39611e+07 50.0049 0.00442985 0.996112 0 50.2199 GTEX-1ICG6-2626-SM-CGQG1 1 B1 2 pieces; high (50%) collagen (fascia) content, especially in 1 piece 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 363 671 BP-69094 RNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993249 809601 0.976714 0.994924 0.810949 26644 1 76 0.00358081 526 0 2.04328e+08 0.0230112 1.269e+06 2.05371e+08 1.41665e+07 26710 1.01824e+08 0 0.165765 0.994924 0.806833 2.04328e+08 0.00351295 4.51623e+07 2.25444e+07 4.56951e+07 444 4.56703e+07 3.10532e+07 0.00354876 4.54495e+07 49.8789 0.00617906 0.9966 0 50.2932 GTEX-1ICG6-2726-SM-CKZPN 1 B1 2 partly fragmented pieces; minimal extraneous tissue 7.7 Muscle Muscle - Skeletal 0011907 363 671 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990654 405404 0.979502 0.993003 0.858288 20630 1 76 0.00170872 214 0 7.96864e+07 0.0202747 907907 8.0248e+07 7.3534e+06 20644 3.96806e+07 0 0.121214 0.993003 0.852283 7.96864e+07 0.00320082 1.75232e+07 7.91004e+06 1.77828e+07 236 1.77709e+07 1.38947e+07 0.002453 1.76928e+07 49.89 0.0113138 0.995351 0 50.3676 GTEX-1ICG6-2826-SM-ADEIJ 1 B1 2 pieces; well trimmed 6.2 Nerve Nerve - Tibial 0001323 371 663 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981379 393877 0.961959 0.987886 0.716102 25006 1 76 0.0034516 212 0 9.68659e+07 0.0378174 379751 9.80537e+07 9.87295e+06 25057 4.79849e+07 0 0.245857 0.987886 0.707427 9.68659e+07 0.00345842 2.10336e+07 1.01829e+07 2.1256e+07 252 2.14872e+07 1.28859e+07 0.00345499 2.13664e+07 49.8591 0.00387289 0.994394 0 50.2629 GTEX-1ICG6-2926-SM-COH4C 1 B1 2 pieces; external fat comprises 70% area in 1 piece; mild plaque formation 6.5 Blood Vessel Artery - Tibial 0007610 371 663 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991346 247517 0.970674 0.992873 0.803129 22908 1 76 0.00348605 169 0 7.98731e+07 0.0290768 456123 8.04465e+07 8.41231e+06 22930 3.97703e+07 0 0.167545 0.992873 0.797405 7.98731e+07 0.00446037 1.72073e+07 6.80982e+06 1.73302e+07 193 1.72601e+07 1.28013e+07 0.00397246 1.73973e+07 50.198 0.00566989 0.9944 0 50.1779 GTEX-1ICG6-5001-SM-AN47I B1 Heart Heart - Left Ventricle 0006566 276 ChIP-Seq GTEX-1ICG6-5019-SM-AN47J B1 Muscle Muscle - Skeletal 0011907 363 ChIP-Seq GTEX-1ICLY-0003-SM-DC69K B1 Blood Whole Blood 0013756 455 BP-59159 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1ICLY-0003-SM-DCCZE B1 Blood Whole Blood 0013756 455 BP-59159 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2014 LCSET-10154 12/05/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1ICLY-0005-SM-A9G16 B1 8.5 Blood Whole Blood 0013756 455 BP-59158 RNA isolation_PAXgene Blood RNA (Manual) 12/22/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.975155 580543 0.973604 0.981808 0.775007 19274 1 76 0.00399987 113 0 8.45651e+07 0.0258105 356962 8.61321e+07 7.53466e+06 19287 4.19025e+07 0 0.198597 0.981808 0.760908 8.45651e+07 0.00480714 1.90302e+07 7.91261e+07 1.92945e+07 136 1.95059e+07 1.84173e+07 0.00439547 1.93789e+07 49.8367 0.00414436 0.98846 0 50.3448 GTEX-1ICLY-0126-SM-D4P36 0 C1 6 pieces, no dermal fat; squamous epithelium is ~30-40 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 472 1202 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993178 490945 0.967279 0.994688 0.794472 25222 1 76 0.00233865 383 0 1.24012e+08 0.0324826 877070 1.24674e+08 1.48237e+07 25259 6.17961e+07 0 0.172807 0.994688 0.790251 1.24012e+08 0.00384106 2.69397e+07 1.94937e+07 2.73498e+07 353 2.72848e+07 2.07081e+07 0.00308872 2.71791e+07 49.9029 0.00703489 0.996197 0 50.3777 GTEX-1ICLY-0226-SM-ARL7R 0 C1 2 pieces, ~15-20% vascular/fascia elements, rep. delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 483 1191 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992022 470810 0.977384 0.992126 0.819397 20821 1 76 0.00173142 131 0 5.56916e+07 0.0223222 202135 5.61336e+07 4.54313e+06 20841 2.76882e+07 0 0.157987 0.992126 0.812945 5.56916e+07 0.00232159 1.22331e+07 5.74598e+06 1.22687e+07 141 1.24535e+07 1.01646e+07 0.00202647 1.20569e+07 49.191 0.00360096 0.992229 0 50.0728 GTEX-1ICLY-0326-SM-ARL7S 0 C1 2 pieces, 20% interstitial fat/vascular elements 7.4 Muscle Muscle - Skeletal 0011907 482 1192 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990546 788087 0.977632 0.991018 0.824463 19558 1 76 0.00160172 141 0 5.64913e+07 0.0221802 623173 5.70033e+07 4.20511e+06 19574 2.80444e+07 0 0.153169 0.991018 0.817058 5.64913e+07 0.00213877 1.22772e+07 8.10543e+06 1.23908e+07 150 1.26499e+07 9.09468e+06 0.00187012 1.20359e+07 48.7564 0.0109322 0.99149 0 50.2303 GTEX-1ICLY-0426-SM-ARL7T 0 C1 2 pieces, no adherent fat, clean specimen 7.7 Nerve Nerve - Tibial 0001323 492 1182 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991895 570105 0.966289 0.99165 0.747439 22452 1 76 0.00188739 126 0 5.588e+07 0.0333815 185564 5.63505e+07 4.79485e+06 22479 2.77716e+07 0 0.21885 0.99165 0.741198 5.588e+07 0.0024306 1.23624e+07 4.83295e+06 1.23177e+07 128 1.25845e+07 8.77494e+06 0.00215906 1.20835e+07 48.9845 0.00329303 0.991405 0 49.9094 GTEX-1ICLY-0526-SM-A9G36 0 C1 2 pieces, no adherent fat or significant atherosis 6.1 Blood Vessel Artery - Tibial 0007610 491 1183 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98065 165943 0.971527 0.987768 0.792948 21761 1 76 0.00411788 133 0 6.91705e+07 0.0281648 455111 7.0027e+07 6.98009e+06 21783 3.42398e+07 0 0.178579 0.987768 0.783249 6.91705e+07 0.00414785 1.46566e+07 5.74109e+06 1.49714e+07 147 1.51162e+07 1.1115e+07 0.00413256 1.49582e+07 49.7374 0.00649908 0.994887 0 50.5312 GTEX-1ICLY-0626-SM-A8N9F 1 C1 2 pieces, 90% glandular elements; ~10% fat, delineated. 7.5 Salivary Gland Minor Salivary Gland 0006330 495 1179 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983277 351582 0.968848 0.985592 0.773342 25473 1 76 0.0111624 166 0 9.24649e+07 0.0291758 358549 9.38167e+07 1.6306e+07 25510 4.58527e+07 0 0.195506 0.985592 0.762199 9.24649e+07 0.0113334 2.04778e+07 1.39132e+07 2.07092e+07 184 2.07949e+07 1.38325e+07 0.0112477 2.06034e+07 49.7687 0.0038218 0.987906 0 50.281 GTEX-1ICLY-0726-SM-A96TB 2 C1 2 pieces, no abnnormalities 5.9 Thyroid Thyroid 0002046 514 1160 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991681 159844 0.965191 0.99327 0.727842 22665 1 76 0.00202753 122 0 5.90874e+07 0.0345816 249184 5.94878e+07 2.0878e+06 22696 2.94339e+07 0 0.237349 0.99327 0.722943 5.90874e+07 0.00258381 1.29339e+07 5.77118e+06 1.30939e+07 141 1.30902e+07 7.33445e+06 0.00230522 1.30277e+07 49.8803 0.00418883 0.994859 0 50.3073 GTEX-1ICLY-0826-SM-CMKG1 0 C1 6 pieces squamous epithelium is ~30-40 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 528 1146 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994076 179683 0.976342 0.995152 0.746644 22463 1 76 0.00208634 135 0 6.2843e+07 0.0234445 293362 6.31491e+07 4.7083e+06 22494 3.1317e+07 0 0.229698 0.995152 0.743024 6.2843e+07 0.00281949 1.3852e+07 5.8174e+06 1.39055e+07 140 1.39121e+07 1.03534e+07 0.00245252 1.39139e+07 50.0031 0.00464554 0.996228 0 50.0963 GTEX-1ICLY-0926-SM-CM2RJ 1 C1 2 pieces, acute pneumonia, reactive changes in pneumocytes. Reviewed by PRC staff with concurrence. 6.6 Lung Lung 0008952 535 1139 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993702 277557 0.978535 0.995064 0.815095 22569 1 76 0.00183023 369 0 9.44786e+07 0.0212479 2.29145e+06 9.49472e+07 5.53997e+06 22600 4.70694e+07 0 0.16344 0.995064 0.811073 9.44786e+07 0.00270006 2.07655e+07 8.74817e+06 2.08875e+07 336 2.09465e+07 1.35866e+07 0.00226455 2.08247e+07 49.8542 0.024134 0.996427 0 50.1465 GTEX-1ICLY-1126-SM-D4P37 1 C1 6 pieces, no significant atherosis 6 Blood Vessel Artery - Aorta 0001496 542 1132 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992435 308208 0.974219 0.993657 0.765988 23052 1 76 0.002643 208 0 9.59205e+07 0.0254018 321292 9.65328e+07 1.07413e+07 23087 4.77518e+07 0 0.208231 0.993657 0.76113 9.59205e+07 0.00378559 2.08637e+07 7.37936e+06 2.09725e+07 224 2.09427e+07 1.53837e+07 0.00321359 2.10065e+07 50.0761 0.00332832 0.994879 0 50.1301 GTEX-1ICLY-1326-SM-CJI47 1 C1 2 pieces, minimal chronic ischemic changes, interstitial fibrosis. 6.6 Heart Heart - Left Ventricle 0006566 545 1129 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990647 559739 0.986282 0.992273 0.83148 19858 1 76 0.00167928 368 0 8.70132e+07 0.013646 3.66593e+06 8.76908e+07 5.15747e+06 19873 4.32912e+07 0 0.154802 0.992273 0.825055 8.70132e+07 0.0025308 1.88546e+07 3.53157e+07 1.95022e+07 384 1.95295e+07 6.89336e+06 0.00210434 1.8947e+07 49.243 0.0418052 0.993898 0 50.8442 GTEX-1ICLY-1426-SM-CJI48 1 C1 2 pieces, minimal fascia 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 555 1119 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993204 543246 0.978992 0.994207 0.809399 22504 1 76 0.00195089 195 0 8.52124e+07 0.020748 313148 8.57089e+07 5.52181e+06 22527 4.24486e+07 0 0.169593 0.994207 0.804711 8.52124e+07 0.00247897 1.88499e+07 8.49977e+06 1.8993e+07 212 1.90697e+07 1.53588e+07 0.00221466 1.88597e+07 49.7232 0.00365362 0.995211 0 50.1891 GTEX-1ICLY-1526-SM-C1YS4 1 C1 2 pieces, no abnormalities 6 Liver Liver 0001114 557 1117 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990174 386800 0.978737 0.992517 0.851439 21717 1 76 0.00201005 371 0 9.49463e+07 0.02084 1.7154e+06 9.56622e+07 4.47091e+06 21735 4.72331e+07 0 0.127298 0.992517 0.845068 9.49463e+07 0.0024848 2.06742e+07 1.46666e+07 2.10269e+07 347 2.10212e+07 1.36634e+07 0.00224686 2.0876e+07 49.8268 0.0179318 0.994861 0 50.4228 GTEX-1ICLY-1726-SM-B2LVT 1 C1 2 pieces, fibroadipose elements only 5.9 Breast Breast - Mammary Tissue 0008367 566 1108 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989028 546450 0.982194 0.990879 0.843757 21499 1 76 0.00231061 202 0 8.13749e+07 0.0175402 820803 8.2124e+07 3.8296e+06 21514 4.04692e+07 0 0.138437 0.990879 0.836061 8.13749e+07 0.00356946 1.79914e+07 8.01981e+06 1.81797e+07 222 1.81662e+07 1.41438e+07 0.00293886 1.81512e+07 49.9794 0.00999468 0.992729 0 50.2603 GTEX-1ICLY-2026-SM-A8N9D 2 C1 6 pieces, glomeruli present, tubules moderately autolysis 5.7 Kidney Kidney - Cortex 0001225 578 1096 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.987072 228552 0.977139 0.989803 0.848255 22159 1 76 0.0104075 195 0 7.7913e+07 0.0227491 3.79687e+06 7.87157e+07 1.35967e+07 22169 3.87357e+07 0 0.128884 0.989803 0.839605 7.7913e+07 0.0113345 1.70857e+07 2.24192e+07 1.78196e+07 216 1.78977e+07 6.5799e+06 0.0108697 1.71652e+07 48.9554 0.0482352 0.992534 0 51.0513 GTEX-1ICLY-2126-SM-A8N9E 1 C1 6 pieces, squamous mucosa up to ~0.8mm, 25-30% thickness 6.6 Esophagus Esophagus - Mucosa 0006920 586 1088 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986418 215559 0.97141 0.988801 0.794422 22398 1 76 0.0106423 122 0 6.73704e+07 0.0283766 493966 6.81334e+07 1.15799e+07 22413 3.3491e+07 0 0.176988 0.988801 0.785525 6.73704e+07 0.0111702 1.50029e+07 9.10532e+06 1.5187e+07 141 1.5188e+07 9.96024e+06 0.0109056 1.51693e+07 49.9691 0.00724998 0.991183 0 50.305 GTEX-1ICLY-2226-SM-ARZM3 1 C1 6 pieces, confirmed target muscularis6 6.7 Esophagus Esophagus - Muscularis 0004648 586 1088 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987883 809413 0.965826 0.990211 0.77854 22232 1 76 0.00251861 128 0 6.65752e+07 0.0339725 462732 6.72333e+07 2.96656e+06 22261 3.30237e+07 0 0.187286 0.990211 0.770919 6.65752e+07 0.00371698 1.41504e+07 7.24868e+06 1.43639e+07 151 1.4542e+07 1.02268e+07 0.00311639 1.4113e+07 49.2515 0.00688248 0.992539 0 50.3744 GTEX-1ICLY-2326-SM-CL53F 1 C1 6 pieces, confirmed target muscularis 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 601 1073 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.989149 195893 0.966967 0.990658 0.789933 21116 1 76 0.00255252 107 0 5.34557e+07 0.0327796 810081 5.39598e+07 7.04721e+06 21141 2.66103e+07 0 0.177033 0.990658 0.782554 5.34557e+07 0.00369481 1.15929e+07 6.11198e+06 1.18188e+07 130 1.18084e+07 6.98444e+06 0.0031228 1.16778e+07 49.7219 0.0150127 0.992168 0 50.4825 GTEX-1ICLY-2926-SM-C1YS5 2 C1 2 pieces, spermatogenesis is present 6.2 Testis Testis 0000473 627 1047 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989213 548403 0.923403 0.991601 0.695471 33992 1 76 0.00189627 215 0 9.63828e+07 0.0763108 789751 9.71992e+07 4.48493e+06 34067 4.79597e+07 0 0.227932 0.991601 0.68963 9.63828e+07 0.00239361 1.97601e+07 1.35672e+07 1.98844e+07 207 1.99611e+07 1.42977e+07 0.00214434 1.98782e+07 49.896 0.00812508 0.993989 0 50.1568 GTEX-1ICLY-5004-SM-AN47W B1 Muscle Muscle - Skeletal 0011907 481 ChIP-Seq GTEX-1ICLY-5010-SM-AN47V B1 Heart Heart - Left Ventricle 0006566 547 ChIP-Seq GTEX-1ICLZ-0003-SM-DC69S C1 Blood Whole Blood 0013756 1152 BP-59159 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1ICLZ-0003-SM-DCCZP C1 Blood Whole Blood 0013756 1152 BP-59159 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1ICLZ-0011-R10a-SM-A9SM2 C1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 1170 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989863 392564 0.962412 0.991754 0.848981 23404 1 76 0.00628491 156 0 7.41564e+07 0.0371864 3.25035e+06 7.4773e+07 1.24688e+07 23421 3.6904e+07 0 0.113431 0.991754 0.84198 7.41564e+07 0.00828747 1.61494e+07 1.14712e+07 1.63924e+07 182 1.63812e+07 9.03517e+06 0.00728428 1.62749e+07 49.8374 0.0434696 0.993645 0 50.3734 GTEX-1ICLZ-0011-R11a-SM-CJI3N C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 1170 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991211 1.33683e+06 0.941705 0.992395 0.7109 24992 1 76 0.0024096 275 0 1.35544e+08 0.0577424 1.43118e+06 1.36583e+08 8.29453e+06 25045 6.74403e+07 0 0.230806 0.992395 0.705493 1.35544e+08 0.00290647 2.9056e+07 2.54588e+07 2.92762e+07 324 2.9549e+07 1.84546e+07 0.00265774 2.89276e+07 49.4687 0.0104784 0.993579 0 50.1888 GTEX-1ICLZ-0011-R1b-SM-A9SM3 C1, A1 6.6 Brain Brain - Hippocampus 0001954 1170 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990292 297302 0.961692 0.992016 0.850596 22469 1 76 0.00628829 120 0 5.75379e+07 0.0379724 3.57913e+06 5.8001e+07 9.4944e+06 22478 2.86484e+07 0 0.111096 0.992016 0.843805 5.75379e+07 0.008198 1.25348e+07 1.14419e+07 1.27971e+07 139 1.27704e+07 6.62696e+06 0.00724148 1.26443e+07 49.7518 0.061708 0.993739 0 50.5177 GTEX-1ICLZ-0011-R4a-SM-CMKHL C1, A1 6.2 Brain Brain - Amygdala 0001876 1170 BP-71791 RNA isolation_PAXgene Tissue miRNA 02/16/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994548 1.90511e+06 0.92853 0.995564 0.810926 23917 1 76 0.00220248 373 0 1.05848e+08 0.071226 7.98445e+06 1.06319e+08 7.79086e+06 23932 5.27714e+07 0 0.117604 0.995564 0.807329 1.05848e+08 0.00281902 2.20227e+07 6.31858e+07 2.29002e+07 357 2.27105e+07 1.00999e+07 0.00251044 2.2351e+07 49.6011 0.0750987 0.99658 0 50.9767 GTEX-1ICLZ-0011-R6b-SM-A9G3A C1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1170 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98801 440157 0.957437 0.992201 0.83031 24822 1 76 0.00397482 271 0 9.39194e+07 0.0421435 3.47933e+06 9.46576e+07 8.98180e+06 24842 4.6661e+07 0 0.127127 0.992201 0.823835 9.39194e+07 0.00374987 2.03211e+07 1.64657e+07 2.06741e+07 265 2.07924e+07 1.31839e+07 0.00386428 2.05522e+07 49.7096 0.036757 0.996393 0 50.4305 GTEX-1ICLZ-0011-R7a-SM-ARZLU C1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 1170 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.984154 1.09638e+06 0.939158 0.986546 0.799592 23056 1 76 0.00264309 134 0 6.24867e+07 0.0605774 3.00726e+06 6.33388e+07 3.27226e+06 23070 3.096e+07 0 0.139566 0.986546 0.788835 6.24867e+07 0.0037421 1.31313e+07 2.2628e+07 1.35212e+07 162 1.38005e+07 7.38134e+06 0.00319126 1.29862e+07 48.4801 0.0474789 0.988939 0 50.7315 GTEX-1ICLZ-0011-R8b-SM-ACKX4 C1, A1 6.1 Brain Brain - Hypothalamus 0001898 1170 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.990907 366855 0.963752 0.992815 0.839317 24175 1 76 0.00286821 278 0 1.08742e+08 0.0360194 9.35662e+06 1.09529e+08 1.39721e+07 24198 5.41474e+07 0 0.124435 0.992815 0.833286 1.08742e+08 0.00401342 2.37753e+07 2.18773e+07 2.41804e+07 320 2.40148e+07 1.08046e+07 0.00343972 2.41149e+07 50.1039 0.0854257 0.994722 0 50.4224 GTEX-1ICLZ-0011-R9a-SM-ARL7E C1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1170 BP-66927 RNA isolation_PAXgene Tissue miRNA 09/09/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992184 631401 0.958206 0.992356 0.827751 22536 1 76 0.00191023 164 0 6.181e+07 0.0415631 2.49742e+06 6.22861e+07 4.24239e+06 22551 3.07339e+07 0 0.130455 0.992356 0.821423 6.181e+07 0.00236922 1.35337e+07 1.13119e+07 1.37613e+07 173 1.3829e+07 7.86402e+06 0.00213968 1.34754e+07 49.3526 0.0400959 0.992527 0 50.417 GTEX-1ICLZ-0126-SM-CKZPO 1 C1 6 pieces; sweat glands appear atrophic; 5 of 6 pieces are well trimmed; <5% dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1283 519 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990947 260826 0.979504 0.993213 0.817643 23040 1 76 0.00203532 170 0 7.59877e+07 0.0202603 360221 7.6507e+07 7.63514e+06 23058 3.78311e+07 0 0.161862 0.993213 0.812093 7.59877e+07 0.00358278 1.68953e+07 8.19516e+06 1.69836e+07 178 1.70296e+07 1.40765e+07 0.00280728 1.70141e+07 49.9773 0.00470834 0.995479 0 50.1303 GTEX-1ICLZ-0226-SM-CKZPP 1 C1 2 pieces; 5% stromal content; portion of large blood vessel occupies 20% 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 1285 517 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991355 264871 0.975625 0.993427 0.792003 22958 1 76 0.00209778 148 0 7.35395e+07 0.0240813 154907 7.40261e+07 7.15286e+06 22982 3.66112e+07 0 0.183622 0.993427 0.786797 7.35395e+07 0.00338587 1.61383e+07 6.85932e+06 1.62023e+07 164 1.6236e+07 1.38386e+07 0.00274049 1.62521e+07 50.0248 0.0020926 0.995498 0 50.099 GTEX-1ICLZ-0326-SM-ARL82 1 C1 6 pieces; some adnexal glands are moderately autolyzed; well trimmed; 10% dermal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1313 489 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992036 480377 0.974994 0.992091 0.758845 21115 1 76 0.00182993 127 0 5.56151e+07 0.0248148 371995 5.60585e+07 3.58561e+06 21140 2.7664e+07 0 0.216149 0.992091 0.752844 5.56151e+07 0.0024206 1.24593e+07 7.08139e+06 1.24759e+07 129 1.26479e+07 8.88972e+06 0.00212525 1.22943e+07 49.2912 0.00663584 0.992146 0 50.0332 GTEX-1ICLZ-0426-SM-B2LW2 1 C1 2 pieces; fibroadipose tissue with no obvious mammary ducts 6.5 Breast Breast - Mammary Tissue 0008367 1314 489 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989667 215927 0.979883 0.99108 0.858805 22037 1 76 0.00249973 196 0 8.52204e+07 0.019804 836662 8.59874e+07 4.15601e+06 22056 4.24212e+07 0 0.121078 0.99108 0.851144 8.52204e+07 0.00367414 1.87098e+07 1.00587e+07 1.90228e+07 210 1.89834e+07 1.75341e+07 0.0030861 1.88805e+07 49.8641 0.00973005 0.992493 0 50.4147 GTEX-1ICLZ-0526-SM-ARZM8 2 C1 2 pieces; slightly nodular;, generally poor preservation, focally bordering on severe autolysis 5.7 Thyroid Thyroid 0002046 1319 484 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988543 351225 0.964844 0.990333 0.762138 23178 1 76 0.00265626 118 0 5.50533e+07 0.0348596 166835 5.55907e+07 2.81450e+06 23207 2.73278e+07 0 0.202707 0.990333 0.75477 5.50533e+07 0.00370319 1.19132e+07 6.21553e+06 1.2114e+07 122 1.22357e+07 9.26978e+06 0.00317878 1.18856e+07 49.2742 0.00300113 0.992122 0 50.4179 GTEX-1ICLZ-0626-SM-ARL83 1 C1 2 pieces; focal atrophy with fiber drop-out and to 20% fat content 7.4 Muscle Muscle - Skeletal 0011907 1322 482 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.989637 774230 0.978817 0.990362 0.818881 20486 1 76 0.00195276 141 0 6.16033e+07 0.0209975 1.54356e+06 6.22028e+07 3.73092e+06 20499 3.05645e+07 0 0.159937 0.990362 0.810989 6.16033e+07 0.00252481 1.3498e+07 1.5139e+07 1.35791e+07 163 1.38446e+07 8.70487e+06 0.00223857 1.32659e+07 48.9328 0.024815 0.991088 0 50.1498 GTEX-1ICLZ-0726-SM-ARL84 1 C1 2 pieces; up to 10% fat content; small arteries hyalinized 7.2 Nerve Nerve - Tibial 0001323 1324 480 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.988855 448664 0.964044 0.988823 0.736206 22850 1 76 0.00201308 129 0 5.16953e+07 0.0356509 110308 5.22796e+07 4.90056e+06 22875 2.56919e+07 0 0.227837 0.988823 0.727978 5.16953e+07 0.00255028 1.13076e+07 5.34861e+06 1.13499e+07 121 1.15273e+07 8.50343e+06 0.00228169 1.11331e+07 49.1302 0.00210996 0.988792 0 50.0934 GTEX-1ICLZ-0826-SM-B2LW3 1 C1 2 pieces; heavily calcified; small amount of residual arterial wall present 5.9 Blood Vessel Artery - Tibial 0007610 1325 480 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.987452 485869 0.972735 0.988795 0.798141 24095 1 76 0.00265079 276 0 1.04922e+08 0.0269326 479639 1.06111e+08 4.57006e+06 24140 5.2196e+07 0 0.174594 0.988795 0.789198 1.04922e+08 0.00366008 2.28937e+07 1.08348e+07 2.31034e+07 288 2.30881e+07 1.78627e+07 0.00315475 2.30508e+07 49.9596 0.00452017 0.990138 0 50.228 GTEX-1ICLZ-0926-SM-CKZPQ 2 C1 2 pieces; areas of moderate fibrosis, alveolar edema and macrophages; large vein occupies 20% of 1 piece 6.1 Lung Lung 0008952 1334 471 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.988582 179522 0.974246 0.990893 0.804992 23582 1 76 0.00215323 162 0 7.64088e+07 0.0253953 251742 7.71111e+07 7.37574e+06 23604 3.80048e+07 0 0.169253 0.990893 0.797662 7.64088e+07 0.00382823 1.68025e+07 1.09261e+07 1.69044e+07 175 1.69093e+07 1.48393e+07 0.00298877 1.69721e+07 50.0926 0.00326467 0.993205 0 50.1512 GTEX-1ICLZ-1026-SM-A9SLF 1 C1 2 pieces; patchy scars (largest circled) & muscle drop-out consistent with old ischemia; thin layer of pericardial fat 6.1 Heart Heart - Left Ventricle 0006566 1337 469 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990538 185593 0.983396 0.99219 0.853826 20988 1 76 0.00668332 192 0 8.41973e+07 0.0165117 4.8176e+06 8.486e+07 1.43968e+07 20999 4.19431e+07 0 0.12957 0.99219 0.847158 8.41973e+07 0.00841917 1.85272e+07 2.17387e+07 1.89842e+07 249 1.90345e+07 6.98261e+06 0.0075498 1.85758e+07 49.3902 0.0567711 0.993842 0 50.6092 GTEX-1ICLZ-1426-SM-CKZPR 1 C1 6 pieces; well dissected muscle layer 6.5 Esophagus Esophagus - Muscularis 0004648 1350 457 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.987254 371816 0.970783 0.989718 0.821789 22905 1 76 0.00208163 168 0 8.11637e+07 0.0289827 632318 8.20069e+07 8.11004e+06 22926 4.03798e+07 0 0.148993 0.989718 0.81334 8.11637e+07 0.00382342 1.74442e+07 7.59577e+06 1.75707e+07 199 1.75757e+07 1.43582e+07 0.00295036 1.76297e+07 50.0767 0.00771055 0.992183 0 50.1806 GTEX-1ICLZ-1626-SM-CE6SS 1 C1 2 pieces; mild scattered inflammatory cell infiltrate [history of ascites] 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1353 455 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106,LCSET-9327 06/16/2016 TruSeq.v1 RNASEQ 0.989575 261921 0.972925 0.99198 0.808959 24082 1 76 0.00284215 173 0 8.59579e+07 0.0260777 746619 8.66529e+07 8.986e+06 24104 4.2718e+07 0 0.163966 0.99198 0.802471 8.59579e+07 0.00438178 1.89159e+07 1.10584e+07 1.89593e+07 196 1.90598e+07 1.59525e+07 0.0036101 1.90213e+07 49.9494 0.0086162 0.994385 0 50.0573 GTEX-1ICLZ-2426-SM-CKZOD 2 C1 6 pieces; mucosa autolyzed, muscularis intact 6.1 Colon Colon - Transverse 0001157 1370 443 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.989672 261156 0.97464 0.991935 0.841387 22592 1 76 0.00191994 170 0 8.09707e+07 0.0250868 152986 8.1629e+07 7.75747e+06 22602 4.02999e+07 0 0.133253 0.991935 0.834601 8.09707e+07 0.00368309 1.75869e+07 7.28874e+06 1.76784e+07 186 1.76886e+07 1.66694e+07 0.0027995 1.77558e+07 50.0948 0.00187416 0.994198 0 50.1298 GTEX-1ICLZ-2626-SM-A9G2K 2 C1 2 pieces; glands autolyzed; stroma, which is predominant, intact 5.6 Prostate Prostate 0002367 1376 437 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.982204 128121 0.964917 0.988349 0.781266 24310 1 76 0.00393923 133 0 6.12782e+07 0.0347946 686716 6.20006e+07 5.4844e+06 24334 3.03584e+07 0 0.18365 0.988349 0.772164 6.12782e+07 0.00481506 1.32106e+07 8.12528e+06 1.34697e+07 129 1.35761e+07 1.09222e+07 0.00436871 1.3458e+07 49.7816 0.011076 0.994494 0 50.4856 GTEX-1ICLZ-2726-SM-A8N8R 2 C1 5 fragmented pieces; meninges present [circled] 6.5 Brain Brain - Cerebellum 0002037 1415 399 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984113 421428 0.944325 0.986793 0.721598 25305 1 76 0.0107691 201 0 1.03189e+08 0.055296 1.64794e+06 1.0457e+08 1.77672e+07 25341 5.12373e+07 0 0.222727 0.986793 0.712068 1.03189e+08 0.0114083 2.21131e+07 1.90142e+07 2.23795e+07 222 2.24629e+07 1.20717e+07 0.0110878 2.22853e+07 49.8015 0.0157591 0.989473 0 50.2995 GTEX-1ICLZ-2826-SM-CL53U 2 C1 4 pieces 6.6 Brain Brain - Cortex 0001870 1417 397 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991092 769349 0.963097 0.993292 0.826871 24892 1 76 0.00281404 371 0 1.08054e+08 0.0365953 6.02194e+06 1.08784e+08 1.47508e+07 24916 5.37468e+07 0 0.136225 0.993292 0.821325 1.08054e+08 0.00431848 2.33843e+07 2.32367e+07 2.40674e+07 386 2.42037e+07 1.18437e+07 0.0035646 2.34599e+07 49.2198 0.0553569 0.995492 0 50.7198 GTEX-1ICLZ-2926-SM-C1YSB 2 C1 1 piece; mostly adenohypophysis; 10% is neural [circled] 7.2 Pituitary Pituitary 0000007 1417 398 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990472 576879 0.96175 0.992699 0.798211 25065 1 76 0.00183679 276 0 9.45387e+07 0.0379543 167873 9.5234e+07 4.2223e+06 25102 4.70334e+07 0 0.163539 0.992699 0.792383 9.45387e+07 0.00226257 2.00791e+07 1.20134e+07 2.02174e+07 262 2.02656e+07 1.70808e+07 0.0020492 2.02218e+07 49.9459 0.00176274 0.994926 0 50.1716 GTEX-1IDFM-0003-SM-DC69R C1 Blood Whole Blood 0013756 669 BP-59198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDFM-0003-SM-DCCZO C1 Blood Whole Blood 0013756 669 BP-59198 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1IDFM-0005-SM-ADEGX C1 7.4 Blood Whole Blood 0013756 669 BP-59199 RNA isolation_PAXgene Blood RNA (Manual) 12/23/2014 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.951848 501806 0.979899 0.958214 0.793566 17105 1 76 0.00323588 142 0 1.13338e+08 0.0186163 453478 1.1828e+08 1.16528e+07 17112 5.60701e+07 0 0.186334 0.958214 0.760406 1.13338e+08 0.00378163 2.65291e+07 1.86953e+08 2.67726e+07 200 2.70594e+07 3.03134e+07 0.00350694 2.69704e+07 49.9176 0.00383392 0.96458 0 50.2285 GTEX-1IDFM-0126-SM-COH2V 1 C1 6 pieces; mostly well trimmed, few with up to ~10% primarily internal fat, epidermis measures 35 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 775 1182 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992069 234951 0.974716 0.993346 0.77507 24444 1 76 0.00351259 194 0 8.12033e+07 0.0250599 518417 8.17473e+07 8.49634e+06 24478 4.04531e+07 0 0.199646 0.993346 0.769912 8.12033e+07 0.004286 1.78258e+07 8.31185e+06 1.7888e+07 186 1.78681e+07 1.32461e+07 0.0038988 1.79489e+07 50.1128 0.0063417 0.994622 0 50.0871 GTEX-1IDFM-0226-SM-CMKFX 1 C1 2 pieces; fat with <10% fibrous component 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 777 1180 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-,LCSET-9116 09/04/2016 TruSeq.v1 RNASEQ 0.992264 528389 0.979665 0.9933 0.776096 23970 1 76 0.00208261 379 0 1.20104e+08 0.0198985 1.05927e+06 1.20914e+08 9.21177e+06 24027 5.97751e+07 0 0.203569 0.9933 0.770897 1.20104e+08 0.00281201 2.66323e+07 1.25379e+07 2.68266e+07 367 2.6879e+07 2.09339e+07 0.00244693 2.67018e+07 49.8346 0.0087605 0.994337 0 50.1818 GTEX-1IDFM-0326-SM-ARL7V 1 C1 6 pieces; include 10-30% internal/attached fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 797 1161 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.986911 582786 0.973492 0.986951 0.696477 22516 1 76 0.00218329 117 0 5.41202e+07 0.0262222 514731 5.48358e+07 3.48427e+06 22552 2.6886e+07 0 0.277015 0.986951 0.687389 5.41202e+07 0.00261948 1.20977e+07 6.25244e+06 1.20695e+07 113 1.23488e+07 8.21266e+06 0.00240138 1.18261e+07 48.9188 0.00938677 0.986992 0 49.9418 GTEX-1IDFM-0426-SM-B2LVV 1 C1 2 pieces; predominantly fat with 10-20% interspersed fibrous tissue and nerve, no ductal elements in this section, central defect in one piece (?poor fixation) 5.9 Breast Breast - Mammary Tissue 0008367 798 1160 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989641 320084 0.97946 0.99124 0.745141 22724 1 76 0.00260476 176 0 8.42547e+07 0.0202091 897366 8.49992e+07 4.13362e+06 22756 4.18952e+07 0 0.234318 0.99124 0.738614 8.42547e+07 0.00401498 1.86633e+07 1.06524e+07 1.88179e+07 191 1.88313e+07 1.34983e+07 0.00330873 1.87842e+07 49.9375 0.0105573 0.992839 0 50.2062 GTEX-1IDFM-1126-SM-A96SY 2 C1 6 pieces; epithelium is sloughing, one piece includes small portion of muscularis (not target) 6.1 Esophagus Esophagus - Mucosa 0006920 816 1147 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.992787 372414 0.975407 0.994095 0.844926 22621 1 76 0.0020831 368 0 1.17754e+08 0.0244644 4.94515e+06 1.18453e+08 7.0688e+06 22644 5.86716e+07 0 0.130481 0.994095 0.839937 1.17754e+08 0.00289093 2.63002e+07 1.1923e+07 2.69887e+07 421 2.68508e+07 9.86795e+06 0.00248649 2.6577e+07 49.7438 0.0417478 0.995403 0 50.646 GTEX-1IDFM-1526-SM-ARL7U 1 C1 2 pieces; rare atrophic fiber 7.9 Muscle Muscle - Skeletal 0011907 821 1144 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8137,LCSET-8790 03/22/2016 TruSeq.v1 RNASEQ 0.985294 1.254e+06 0.971323 0.988597 0.792674 22720 1 76 0.0038293 161 0 8.97076e+07 0.0284598 2.61727e+06 9.07424e+07 1.67995e+07 22749 4.4429e+07 0 0.178649 0.988597 0.783636 8.97076e+07 0.00559891 1.94693e+07 1.1898e+07 1.94563e+07 183 2.0056e+07 1.63807e+07 0.00471115 1.91398e+07 48.8313 0.0288428 0.991901 0 49.9833 GTEX-1IDFM-1726-SM-B2LVU 1 C1 2 pieces; relatively well trimmed with minimal attached fat 6.9 Nerve Nerve - Tibial 0001323 825 1141 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723,LCSET-9171 05/22/2016 TruSeq.v1 RNASEQ 0.986583 630070 0.969201 0.988337 0.715286 25862 1 76 0.00619202 225 0 1.07445e+08 0.0304648 232193 1.08713e+08 2.01418e+07 25923 5.33768e+07 0 0.253915 0.988337 0.706943 1.07445e+08 0.00747188 2.37387e+07 1.06898e+07 2.37336e+07 213 2.37917e+07 1.6181e+07 0.00683081 2.3859e+07 50.0706 0.00213584 0.99009 0 49.9946 GTEX-1IDFM-2826-SM-ACKWJ 2 C1 4 pieces; questionable increase in glial cells 6.6 Brain Brain - Cortex 0001870 846 1125 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993301 269209 0.972197 0.994928 0.84722 21603 1 76 0.00251192 263 0 7.85015e+07 0.0276607 1.05267e+07 7.89017e+07 1.02401e+07 21613 3.91113e+07 0 0.124977 0.994928 0.842923 7.85015e+07 0.00339224 1.71138e+07 2.34876e+07 1.76692e+07 322 1.74434e+07 4.42735e+06 0.00295136 1.74243e+07 49.9727 0.133416 0.996555 0 50.7984 GTEX-1IDFM-2926-SM-CNNPH 2 C1 1 piece; adenohypophysis (70%) and neurohypophysis (30%) 5.9 Pituitary Pituitary 0000007 846 1126 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991101 261610 0.963258 0.993568 0.803155 24139 1 76 0.00232938 197 0 7.34657e+07 0.0365868 2.54452e+06 7.39413e+07 8.41393e+06 24166 3.65649e+07 0 0.160103 0.993568 0.797989 7.34657e+07 0.00385386 1.59764e+07 1.07556e+07 1.63627e+07 225 1.63519e+07 7.13488e+06 0.00308973 1.61552e+07 49.6975 0.0344126 0.996035 0 50.5972 GTEX-1IDJC-0003-SM-DCD1A B1 Blood Whole Blood 0013756 -138 BP-59238 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/26/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1IDJC-0004-SM-DHP12 B1 Blood Whole Blood 0013756 -138 BP-59238 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/26/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJC-0005-SM-A9G1C B1 8.3 Blood Whole Blood 0013756 -138 BP-59239 RNA isolation_PAXgene Blood RNA (Manual) 12/26/2014 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.980476 561351 0.965734 0.985725 0.801865 18016 1 76 0.0037539 96 0 7.4018e+07 0.0334626 135794 7.50899e+07 6.00802e+06 18018 3.67339e+07 0 0.163869 0.985725 0.790419 7.4018e+07 0.00456942 1.68752e+07 9.14286e+07 1.69304e+07 118 1.70777e+07 1.78137e+07 0.00415415 1.71214e+07 50.0639 0.00180842 0.990974 0 50.0817 GTEX-1IDJC-0126-SM-C1YQC 1 B1 2 pieces, no abnormalities 8 Spleen Spleen 0002106 344 566 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98718 537769 0.963814 0.989602 0.7691 24504 1 76 0.00303819 206 0 9.53477e+07 0.0328533 428216 9.63495e+07 4.1239e+06 24544 4.72707e+07 0 0.194714 0.989602 0.761103 9.53477e+07 0.00365463 2.10487e+07 1.87395e+07 2.11888e+07 222 2.12886e+07 1.48869e+07 0.00334565 2.1163e+07 49.852 0.0044444 0.992024 0 50.1658 GTEX-1IDJC-0226-SM-CMKG2 1 B1 2 pieces, ~5% fascia/vascular elements 8.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 348 562 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.99571 315294 0.976865 0.99642 0.826233 23359 1 76 0.00202708 284 0 1.02944e+08 0.0227848 410910 1.03314e+08 7.19785e+06 23393 5.13456e+07 0 0.150631 0.99642 0.823275 1.02944e+08 0.00242091 2.25899e+07 9.49003e+06 2.28678e+07 315 2.28527e+07 1.94358e+07 0.00222385 2.2677e+07 49.807 0.00397731 0.99713 0 50.3056 GTEX-1IDJC-0426-SM-B2LW1 1 B1 6 pieces, atherosis up to ~0.4mm 7.8 Blood Vessel Artery - Aorta 0001496 364 546 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992499 471482 0.975999 0.99407 0.820537 22763 1 76 0.00229851 169 0 7.59738e+07 0.023562 148197 7.6427e+07 3.08218e+06 22785 3.78203e+07 0 0.155462 0.99407 0.815671 7.59738e+07 0.00372025 1.65491e+07 5.08404e+06 1.66219e+07 177 1.66404e+07 1.41427e+07 0.00300826 1.66459e+07 50.0082 0.00193907 0.995641 0 50.1098 GTEX-1IDJC-0526-SM-AHZ2Q 1 B1 2 pieces, Islets well-preserved, rep encircled 7.6 Pancreas Pancreas 0001150 373 537 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.990988 282027 0.97559 0.992482 0.822065 22504 1 76 0.0052597 113 0 7.77809e+07 0.0242152 163392 7.837e+07 9.46989e+06 22524 3.87371e+07 0 0.153525 0.992482 0.815885 7.77809e+07 0.00673375 1.77281e+07 1.67369e+07 1.7877e+07 122 1.78738e+07 2.02359e+07 0.00599562 1.78476e+07 49.9634 0.00208488 0.993977 0 50.2091 GTEX-1IDJC-0726-SM-CL53G 1 B1 6 pieces, confirmed target muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 394 516 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993258 342848 0.976042 0.994798 0.825075 22019 1 76 0.0024839 169 0 7.63837e+07 0.0236067 283591 7.67831e+07 9.33826e+06 22038 3.80448e+07 0 0.150967 0.994798 0.820783 7.63837e+07 0.00390916 1.64763e+07 6.32824e+06 1.6631e+07 171 1.66539e+07 1.44343e+07 0.00319543 1.65662e+07 49.8679 0.0036934 0.996339 0 50.2336 GTEX-1IDJC-0826-SM-A9SLO 1 B1 6 pieces, confirmed target muscularis 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 406 504 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.99042 241077 0.976422 0.991878 0.834129 21563 1 76 0.00648745 112 0 6.06572e+07 0.0232305 234178 6.11539e+07 1.06653e+07 21578 3.02075e+07 0 0.142294 0.991878 0.827354 6.06572e+07 0.00803338 1.31388e+07 5.73776e+06 1.31978e+07 118 1.32098e+07 1.13637e+07 0.00725928 1.32061e+07 49.9931 0.00382933 0.993336 0 50.1121 GTEX-1IDJC-0926-SM-A8N95 3 B1 6 pieces, target mucosa up to ~0.9mm, advanced autolysis, sloughing 6.1 Stomach Stomach 0000945 412 498 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986114 218559 0.978262 0.988392 0.844842 22953 1 76 0.0107686 199 0 7.81454e+07 0.0213342 1.47036e+06 7.90631e+07 1.30692e+07 22968 3.88519e+07 0 0.133421 0.988392 0.835035 7.81454e+07 0.0112644 1.72595e+07 3.0149e+07 1.79304e+07 189 1.78271e+07 1.11502e+07 0.0110159 1.75054e+07 49.5447 0.0185973 0.990671 0 50.9532 GTEX-1IDJC-1026-SM-A96T2 1 B1 2 pieces, micronodular goitre 7.3 Thyroid Thyroid 0002046 420 490 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992494 262175 0.970491 0.993891 0.754116 23437 1 76 0.00208529 141 0 7.01236e+07 0.0291841 146276 7.05546e+07 2.47335e+06 23473 3.49388e+07 0 0.216375 0.993891 0.749509 7.01236e+07 0.00233957 1.53883e+07 6.0404e+06 1.55009e+07 152 1.55282e+07 1.17771e+07 0.00221225 1.54524e+07 49.8777 0.00207323 0.995289 0 50.1823 GTEX-1IDJC-1326-SM-CL53H 1 B1 6 pieces, mucosa up to ~0.35mm, 10-15% thickness 8.8 Colon Colon - Transverse 0001157 420 490 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993663 501538 0.974221 0.994958 0.806582 25065 1 76 0.00266229 386 0 1.28462e+08 0.0254204 661753 1.29113e+08 1.6937e+07 25108 6.39955e+07 0 0.167638 0.994958 0.802515 1.28462e+08 0.00352536 2.80854e+07 1.23894e+07 2.83509e+07 344 2.83589e+07 2.13987e+07 0.00309326 2.82357e+07 49.8912 0.00512536 0.996252 0 50.2352 GTEX-1IDJC-1526-SM-B2LW4 0 B1 6 pieces, squamous epithelium is ~50 microns; minimal dermal fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 455 455 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.992388 442721 0.973368 0.993871 0.794021 23606 1 76 0.00248586 153 0 6.82747e+07 0.0263684 319502 6.86957e+07 2.65972e+06 23628 3.39908e+07 0 0.179347 0.993871 0.789155 6.82747e+07 0.00354764 1.51285e+07 6.65184e+06 1.52188e+07 154 1.52551e+07 1.21917e+07 0.00301596 1.51898e+07 49.8927 0.00465097 0.995354 0 50.1487 GTEX-1IDJC-1626-SM-AHZ2R 1 B1 2 pieces, ~50% glandular parenchyma; delineated; rest is stroma/squamous mucosa; sample with care 8.9 Salivary Gland Minor Salivary Gland 0006330 473 437 BP-67135 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.986326 500917 0.973729 0.987914 0.791329 26019 1 76 0.00726485 292 0 1.30892e+08 0.0252774 258836 1.32494e+08 2.48169e+07 26067 6.50715e+07 0 0.1824 0.987914 0.781765 1.30892e+08 0.00851314 2.93765e+07 2.59257e+07 2.96907e+07 313 2.97072e+07 2.31874e+07 0.00788799 2.95684e+07 49.8829 0.00195357 0.989502 0 50.266 GTEX-1IDJC-1726-SM-CMKG3 0 B1 6 pieces, squamou epithelium is ~50 microns; adherent dermal fat nubbins up to ~2mm, rep delineated 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 483 427 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 EXCLUDE 0.9954 482453 0.976264 0.996059 0.816653 24383 1 76 0.00209221 383 0 1.27776e+08 0.0233832 219785 1.28282e+08 9.39172e+06 24422 6.37177e+07 0 0.159611 0.996059 0.813434 1.27776e+08 0.00245131 2.79734e+07 1.06391e+07 2.8123e+07 338 2.8127e+07 2.5212e+07 0.00227164 2.8054e+07 49.935 0.0017133 0.996718 0 50.1334 GTEX-1IDJC-1926-SM-ACKWT 0 B1 2 pieces, minmal adherent fat, focally up to 0.5mm 8 Nerve Nerve - Tibial 0001323 480 430 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992856 569814 0.960892 0.994105 0.755856 25572 1 76 0.00285687 310 0 1.17971e+08 0.0387322 351582 1.1867e+08 1.53141e+07 25619 5.87659e+07 0 0.205036 0.994105 0.751401 1.17971e+08 0.00362783 2.57109e+07 2.15177e+07 2.59751e+07 299 2.59986e+07 1.96382e+07 0.00324187 2.58287e+07 49.8362 0.00296268 0.995354 0 50.2556 GTEX-1IDJC-2026-SM-ADEIK 0 B1 2 pieces, interstitial fat/vascular elments up to ~25% of tissue, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 475 435 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.98318 468764 0.981654 0.98959 0.86098 21147 1 76 0.00318923 278 0 1.21893e+08 0.0181081 1.0586e+06 1.23175e+08 1.24662e+07 21162 6.04282e+07 0 0.120675 0.98959 0.852017 1.21893e+08 0.00318989 2.59999e+07 2.22539e+07 2.66425e+07 321 2.68191e+07 2.2105e+07 0.00318956 2.64853e+07 49.6868 0.0085943 0.996001 0 50.6103 GTEX-1IDJC-2126-SM-ACKWU 0 B1 2 pieces, 60% fat (rep delineated); rest is fascia/connective elements; sample carefully 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 485 425 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 EXCLUDE 0.993603 186436 0.979222 0.994783 0.872391 22127 1 76 0.00269505 209 0 7.9224e+07 0.0205249 229117 7.96394e+07 9.79397e+06 22137 3.94818e+07 0 0.106831 0.994783 0.86784 7.9224e+07 0.00359024 1.73496e+07 8.94363e+06 1.75724e+07 205 1.75208e+07 1.63574e+07 0.00314211 1.74993e+07 49.9694 0.00287693 0.995964 0 50.319 GTEX-1IDJD-0003-SM-DC69J B1 Blood Whole Blood 0013756 -83 BP-59238 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/26/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJD-0003-SM-DCCZJ B1 Blood Whole Blood 0013756 -83 BP-59238 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/26/2014 LCSET-10154 12/05/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1IDJD-0006-SM-ARZLC B1 9.1 Blood Whole Blood 0013756 -83 BP-59239 RNA isolation_PAXgene Blood RNA (Manual) 12/26/2014 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986959 1.11454e+06 0.957419 0.989231 0.811135 19158 1 76 0.00254282 114 0 6.51095e+07 0.0422198 212626 6.58183e+07 2.49799e+06 19175 3.22974e+07 0 0.146284 0.989231 0.8024 6.51095e+07 0.00398412 1.42905e+07 3.77612e+07 1.44285e+07 123 1.46607e+07 1.50423e+07 0.00326182 1.42046e+07 49.2099 0.0032305 0.991503 0 50.2404 GTEX-1IDJD-0126-SM-C1YQZ 1 B1 2 pieces; well preserved parenchyma with Langerhans islets (rep outlined); 30% and 5% internal/external fat 7 Pancreas Pancreas 0001150 216 836 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990327 1.14493e+06 0.960333 0.992905 0.814356 22672 1 76 0.00181714 160 0 1.02332e+08 0.0394876 227502 1.03063e+08 4.44704e+06 22701 5.09214e+07 0 0.145977 0.992905 0.808578 1.02332e+08 0.00234585 2.29437e+07 3.75032e+07 2.32024e+07 175 2.33127e+07 2.72769e+07 0.0020808 2.31039e+07 49.7751 0.0022074 0.995484 0 50.2803 GTEX-1IDJD-0226-SM-CKZOA 1 B1 2 pieces; ~50% and ~40% internal fat 9.1 Heart Heart - Atrial Appendage 0006631 227 825 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991751 301321 0.97836 0.994175 0.845986 21379 1 76 0.00266292 126 0 6.60024e+07 0.0211083 926281 6.63891e+07 6.50011e+06 21398 3.28504e+07 0 0.132374 0.994175 0.841058 6.60024e+07 0.00386721 1.42363e+07 8.40628e+06 1.44799e+07 157 1.45514e+07 1.06063e+07 0.0032636 1.42956e+07 49.5566 0.0139523 0.996599 0 50.4241 GTEX-1IDJD-0426-SM-CM2TO 1 B1 2 pieces; one well trimmed; other with 1.5mm adherent fat 7.8 Blood Vessel Artery - Coronary 0001621 237 815 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994177 378845 0.976251 0.995427 0.846509 23724 1 76 0.00182423 382 0 1.18408e+08 0.0233065 355544 1.18952e+08 6.90283e+06 23751 5.90063e+07 0 0.129742 0.995427 0.842639 1.18408e+08 0.00262012 2.58064e+07 8.30238e+06 2.59446e+07 331 2.59943e+07 2.428e+07 0.00222168 2.58958e+07 49.9051 0.00298896 0.996677 0 50.1335 GTEX-1IDJD-0726-SM-A8N9G 1 B1 2 pieces; congestion 6.3 Spleen Spleen 0002106 269 783 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.982086 247786 0.963096 0.985655 0.765352 24951 1 76 0.0110676 130 0 7.49082e+07 0.0362646 423372 7.59984e+07 1.39518e+07 24980 3.71589e+07 0 0.197744 0.985655 0.754373 7.49082e+07 0.0123971 1.63328e+07 1.15902e+07 1.6586e+07 146 1.66248e+07 1.0328e+07 0.01173 1.65504e+07 49.8877 0.0055708 0.989223 0 50.3845 GTEX-1IDJD-0826-SM-A8N9H 1 B1 2 pieces; congestion and collapsed alveolar spaces containing exfoliated alveolar epithelial cells; larger vessels included (arrows) 7.4 Lung Lung 0008952 282 770 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985917 236241 0.969371 0.988383 0.796111 25330 1 76 0.0110751 154 0 8.13381e+07 0.0302899 431947 8.22941e+07 1.46328e+07 25355 4.04212e+07 0 0.17326 0.988383 0.786863 8.13381e+07 0.0111563 1.77414e+07 1.05552e+07 1.81866e+07 169 1.81481e+07 1.11616e+07 0.0111156 1.79674e+07 49.7498 0.00524882 0.990849 0 50.6196 GTEX-1IDJD-0926-SM-ACKWW 1 B1 2 pieces; lobulated mature adipose tissue 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 300 752 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991874 274548 0.976504 0.993902 0.811527 24590 1 76 0.00275345 276 0 1.06452e+08 0.0231783 685757 1.07105e+08 1.44601e+07 24630 5.30073e+07 0 0.164977 0.993902 0.806578 1.06452e+08 0.00393903 2.3435e+07 1.34916e+07 2.36602e+07 293 2.3656e+07 1.73482e+07 0.00334503 2.36342e+07 49.977 0.00640265 0.99593 0 50.239 GTEX-1IDJD-1226-SM-CM2TP 2 B1 2 pieces; mature adipose tissue with fibrovascular component; one contains hair bulb, adnexa, nerves and vessels (outlined) 8.2 Adipose Tissue Adipose - Subcutaneous 0002190 447 605 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992947 238202 0.978392 0.994099 0.825724 23040 1 76 0.00191006 211 0 8.72622e+07 0.0212689 135798 8.77802e+07 5.69166e+06 23069 4.34511e+07 0 0.152668 0.994099 0.820851 8.72622e+07 0.0028692 1.92464e+07 6.80299e+06 1.93112e+07 214 1.93294e+07 1.75628e+07 0.00238907 1.93257e+07 49.9952 0.00154702 0.995251 0 50.084 GTEX-1IDJD-1326-SM-CM2TQ 1 B1 2 pieces; ~5% internal fat and small focus of external fat (arrow) 7.6 Muscle Muscle - Skeletal 0011907 454 598 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994648 293750 0.984798 0.995735 0.885333 20345 1 76 0.00174363 385 0 1.0971e+08 0.0150014 1.07986e+06 1.1018e+08 6.58969e+06 20354 5.47046e+07 0 0.099465 0.995735 0.881557 1.0971e+08 0.00227326 2.37516e+07 9.76233e+06 2.40645e+07 340 2.40739e+07 2.27712e+07 0.00200816 2.38428e+07 49.7589 0.00980095 0.996822 0 50.3272 GTEX-1IDJD-1426-SM-CM2TR 1 B1 2 pieces; not nerve, cross sections of artery with small rim of adventitia; lumen open 7.4 Blood Vessel Artery - Tibial 0007610 462 590 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115,LCSET-9514 07/27/2016 TruSeq.v1 RNASEQ 0.955854 1.03552e+06 0.975772 0.962465 0.833837 21752 1 76 0.00358937 140 0 7.26486e+07 0.023744 149236 7.54818e+07 8.54454e+06 21770 3.53136e+07 0 0.141935 0.962465 0.802539 7.26486e+07 0.00509859 1.43704e+07 6.11862e+06 1.6708e+07 141 1.76521e+07 1.52754e+07 0.0043388 1.38947e+07 44.0448 0.00197711 0.969077 0 53.7608 GTEX-1IDJD-1526-SM-CMKGA 1 B1 2 pieces; not artery, sections of nerve with trace and ~5% of external fat (outlined); 7.3 Nerve Nerve - Tibial 0001323 460 592 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994735 381679 0.971139 0.99551 0.75276 24393 1 76 0.00211455 278 0 1.09219e+08 0.0285618 278767 1.09711e+08 7.9318e+06 24437 5.44522e+07 0 0.21838 0.99551 0.74938 1.09219e+08 0.00257664 2.40387e+07 1.06232e+07 2.41639e+07 309 2.41712e+07 1.86532e+07 0.00234541 2.41175e+07 49.9444 0.00254091 0.996285 0 50.1298 GTEX-1IDJD-1626-SM-C1YRC 1 B1 6 pieces; ~ 207um squamous epithelium with parakeratosis; 3 pieces contain submucosal glands (outlined) 9 Esophagus Esophagus - Mucosa 0006920 599 453 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98797 832269 0.975236 0.99065 0.810799 23479 1 76 0.00183355 278 0 1.05092e+08 0.0244486 399759 1.06084e+08 4.61554e+06 23512 5.22832e+07 0 0.164437 0.99065 0.803218 1.05092e+08 0.00238438 2.36017e+07 1.41443e+07 2.37372e+07 300 2.38681e+07 2.10892e+07 0.00210822 2.37305e+07 49.8554 0.00376832 0.993331 0 50.1432 GTEX-1IDJD-2026-SM-A96TC 1 B1 2 pieces; mild to moderated autolysis; fibromuscular stroma and glandular componenet with corpora amylacea and sloughed glandular epithelium 7.3 Prostate Prostate 0002367 617 435 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99168 285247 0.963803 0.993456 0.78646 23708 1 76 0.00203126 130 0 5.85227e+07 0.0358961 303351 5.89082e+07 2.02648e+06 23730 2.91457e+07 0 0.177343 0.993456 0.781314 5.85227e+07 0.00268087 1.27663e+07 7.33714e+06 1.29635e+07 143 1.29544e+07 8.79385e+06 0.00235549 1.2877e+07 49.8502 0.00514956 0.995233 0 50.3831 GTEX-1IDJD-2226-SM-A96TD 3 B1 6 pieces; advanced autolysis of mucosa and preserved muscularis 7.1 Colon Colon - Transverse 0001157 621 431 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99191 272134 0.97345 0.993465 0.777254 24363 1 76 0.0019091 207 0 8.52081e+07 0.0263032 415079 8.57686e+07 2.71684e+06 24401 4.24623e+07 0 0.196196 0.993465 0.772175 8.52081e+07 0.00239802 1.87788e+07 7.98952e+06 1.89364e+07 240 1.89369e+07 1.37598e+07 0.00215318 1.88999e+07 49.9511 0.00483952 0.995021 0 50.2089 GTEX-1IDJD-2326-SM-ACKWX 1 B1 6 pieces; hair bearing skin with ~ 15% of external/internal fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 625 427 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991458 258775 0.967597 0.99321 0.763128 25879 1 76 0.0029275 289 0 9.82917e+07 0.0321947 630923 9.89636e+07 1.30953e+07 25921 4.89474e+07 0 0.20447 0.99321 0.757946 9.82917e+07 0.0037368 2.1431e+07 1.27184e+07 2.17208e+07 269 2.1707e+07 1.43258e+07 0.00333144 2.16064e+07 49.8838 0.0063753 0.994963 0 50.3358 GTEX-1IDJD-2426-SM-C1YS6 1 B1 6 pieces; mild to moderate autolysis of gastric mucosa; 3 sections contain muscularis (outlined) 7 Stomach Stomach 0000945 627 425 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988051 269632 0.979307 0.990797 0.832301 22182 1 76 0.00186026 236 0 6.37425e+07 0.0204193 744377 6.43345e+07 2.95212e+06 22198 3.16888e+07 0 0.147006 0.990797 0.824642 6.37425e+07 0.00257501 1.44874e+07 4.51238e+07 1.46478e+07 184 1.46897e+07 1.3862e+07 0.00221664 1.46089e+07 49.8622 0.0115704 0.993543 0 50.2752 GTEX-1IDJD-2526-SM-C1YSA 1 B1 3 pieces; essentially well trimmed although two pieces contain small fragments of fibrous tissue (outlined) 8.1 Salivary Gland Minor Salivary Gland 0006330 631 421 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989875 724406 0.94485 0.992452 0.755399 22367 1 76 0.00182934 170 0 6.22782e+07 0.0545855 319762 6.27518e+07 2.45217e+06 22393 3.09749e+07 0 0.18945 0.992452 0.749698 6.22782e+07 0.0023077 1.36258e+07 2.84682e+07 1.37749e+07 149 1.38444e+07 9.84648e+06 0.0020679 1.36994e+07 49.7366 0.00509566 0.995029 0 50.2719 GTEX-1IDJD-5001-SM-AN47T B1 Heart Heart - Left Ventricle 0006566 255 ChIP-Seq GTEX-1IDJD-5010-SM-AN47R B1 Muscle Muscle - Skeletal 0011907 455 ChIP-Seq GTEX-1IDJE-0001-SM-DCCZG B1 Blood Whole Blood 0013756 -77 BP-59251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1IDJE-0002-SM-DHP13 B1 Blood Whole Blood 0013756 -77 BP-59251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2014 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJE-0006-SM-A9G1B B1 8.9 Blood Whole Blood 0013756 -77 BP-59256 RNA isolation_PAXgene Blood RNA (Manual) 01/02/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984725 573854 0.953763 0.990154 0.799448 19882 1 76 0.00382865 120 0 6.55684e+07 0.0459069 228531 6.62205e+07 5.73066e+06 19895 3.25371e+07 0 0.154315 0.990154 0.791577 6.55684e+07 0.00461154 1.42084e+07 3.07766e+07 1.4364e+07 123 1.44917e+07 1.31958e+07 0.00421281 1.44227e+07 49.8808 0.00345106 0.995583 0 50.2723 GTEX-1IDJE-0126-SM-C1YQ6 1 B1 2 pieces; moderate congestion; capsule present 7.2 Spleen Spleen 0002106 66 1100 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.985737 623115 0.969824 0.988216 0.813657 23842 1 76 0.00264878 196 0 8.67861e+07 0.0281282 435045 8.7821e+07 3.94564e+06 23867 4.30626e+07 0 0.156167 0.988216 0.804069 8.67861e+07 0.0031495 1.92841e+07 1.32663e+07 1.94271e+07 206 1.9494e+07 1.55218e+07 0.00289851 1.9417e+07 49.901 0.00495377 0.990696 0 50.1847 GTEX-1IDJE-0326-SM-CM2TD 1 B1 2 pieces: 1 is 90% fat, other 30% fat 7.5 Heart Heart - Left Ventricle 0006566 429 737 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994024 350437 0.983272 0.995584 0.863369 21884 1 76 0.00201978 370 0 1.0074e+08 0.0164995 2.33209e+06 1.01186e+08 5.95495e+06 21899 5.01902e+07 0 0.119903 0.995584 0.859557 1.0074e+08 0.00288652 2.20641e+07 1.382e+07 2.24065e+07 358 2.23675e+07 1.49534e+07 0.00245247 2.22273e+07 49.8428 0.0230474 0.997144 0 50.385 GTEX-1IDJE-0826-SM-CKZNZ 1 B1 2 pieces; fibrocystic changes 6.6 Breast Breast - Mammary Tissue 0008367 456 710 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991186 197703 0.969999 0.993162 0.797537 24700 1 76 0.00203046 167 0 7.67351e+07 0.0297066 334094 7.72635e+07 7.8084e+06 24739 3.82137e+07 0 0.172462 0.993162 0.792084 7.67351e+07 0.00328247 1.68425e+07 7.35169e+06 1.69799e+07 174 1.70074e+07 1.41709e+07 0.00265522 1.69596e+07 49.9296 0.00432409 0.995139 0 50.2031 GTEX-1IDJE-1026-SM-ADEIE 1 B1 6 pieces; flat plaques 7.6 Blood Vessel Artery - Aorta 0001496 466 700 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.983244 327058 0.974748 0.989643 0.830221 21897 1 76 0.00329343 167 0 7.60134e+07 0.0247878 212338 7.68089e+07 8.32943e+06 21921 3.7668e+07 0 0.144527 0.989643 0.821622 7.60134e+07 0.00319517 1.63437e+07 5.70998e+06 1.65413e+07 174 1.67326e+07 1.47397e+07 0.00324462 1.65864e+07 49.7806 0.0027645 0.996042 0 50.3005 GTEX-1IDJE-1126-SM-A96SO 1 B1 2 pieces; graffian and corpus luteum cysts 8 Ovary Ovary 0000992 472 694 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993382 312514 0.971289 0.994728 0.735136 23386 1 76 0.00188687 209 0 8.74859e+07 0.0284333 119518 8.79496e+07 2.91788e+06 23430 4.35987e+07 0 0.236153 0.994728 0.73126 8.74859e+07 0.0022871 1.94109e+07 7.94531e+06 1.95241e+07 217 1.95647e+07 1.47988e+07 0.00208672 1.94828e+07 49.8951 0.00135894 0.996074 0 50.1454 GTEX-1IDJE-1426-SM-ADEIW 1 B1 4 pieces; well trimmed 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 486 680 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982208 394242 0.969828 0.988779 0.772441 26354 1 76 0.0033211 293 0 1.19835e+08 0.0299301 755416 1.21195e+08 1.25942e+07 26404 5.93877e+07 0 0.197386 0.988779 0.763773 1.19835e+08 0.00347757 2.61617e+07 1.28777e+07 2.64685e+07 308 2.67622e+07 1.93526e+07 0.00339882 2.65697e+07 49.8195 0.00623306 0.995348 0 50.2914 GTEX-1IDJE-1526-SM-A9SLG 1 B1 6 pieces: 2 have abundant submucosal stroma 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 489 677 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990669 333362 0.974773 0.992255 0.82882 23133 1 76 0.00635822 177 0 8.841e+07 0.024925 511656 8.91001e+07 1.54881e+07 23156 4.40268e+07 0 0.145952 0.992255 0.822401 8.841e+07 0.00799895 1.92552e+07 8.06009e+06 1.94787e+07 193 1.94716e+07 1.46379e+07 0.00717728 1.93912e+07 49.8967 0.00574248 0.993841 0 50.2884 GTEX-1IDJE-2326-SM-A9SLH 1 B1 2 pieces; 20% internal fat 6.7 Nerve Nerve - Tibial 0001323 737 429 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989866 290179 0.965356 0.991238 0.746629 24591 1 76 0.00668072 152 0 7.94678e+07 0.0343756 344118 8.01703e+07 1.42062e+07 24629 3.95647e+07 0 0.218728 0.991238 0.740087 7.94678e+07 0.0075797 1.74191e+07 8.52719e+06 1.75792e+07 151 1.75716e+07 1.14758e+07 0.00712959 1.75295e+07 49.94 0.00429234 0.992609 0 50.2288 GTEX-1IDJE-2426-SM-ACKWF 1 B1 2 pieces; 5% internal fat 7.6 Muscle Muscle - Skeletal 0011907 743 423 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993938 224301 0.980111 0.995079 0.858352 21781 1 76 0.00265153 291 0 1.02272e+08 0.0196627 1.08704e+06 1.02778e+08 1.27927e+07 21795 5.0982e+07 0 0.12176 0.995079 0.854128 1.02272e+08 0.00321078 2.23513e+07 1.21603e+07 2.26748e+07 288 2.27005e+07 1.81423e+07 0.00293083 2.24359e+07 49.7068 0.0105766 0.996221 0 50.3592 GTEX-1IDJE-5001-SM-AN47L B1 Heart Heart - Left Ventricle 0006566 431 ChIP-Seq GTEX-1IDJE-5016-SM-AN47N B1 Muscle Muscle - Skeletal 0011907 743 ChIP-Seq GTEX-1IDJF-0002-SM-DC69O B1 Blood Whole Blood 0013756 -3 BP-59251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2014 LCSET-10196 12/06/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJF-0002-SM-DCCZD B1 Blood Whole Blood 0013756 -3 BP-59251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2014 LCSET-10154 12/03/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1IDJF-0005-SM-ARU6P B1 8.3 Blood Whole Blood 0013756 -3 BP-59256 RNA isolation_PAXgene Blood RNA (Manual) 01/02/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.989483 780473 0.964968 0.990724 0.82556 18222 1 76 0.00224309 140 0 8.0454e+07 0.0346286 678475 8.12073e+07 2.63371e+06 18233 4.00793e+07 0 0.139408 0.990724 0.817902 8.0454e+07 0.0029966 1.78926e+07 4.76411e+07 1.80441e+07 159 1.80698e+07 1.85336e+07 0.00261938 1.79722e+07 49.8646 0.00835485 0.991965 0 50.2107 GTEX-1IDJF-0126-SM-CM2RS 0 B1 6 pieces; well trimmed; 10% dermal fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 302 1163 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99408 274824 0.974656 0.995071 0.815117 24659 1 76 0.00196864 394 0 1.08919e+08 0.0250838 654257 1.09459e+08 6.36327e+06 24698 5.42806e+07 0 0.15954 0.995071 0.811099 1.08919e+08 0.00258834 2.38881e+07 1.0733e+07 2.39954e+07 341 2.3998e+07 1.95754e+07 0.00227818 2.39877e+07 49.9893 0.00597719 0.996063 0 50.112 GTEX-1IDJF-0226-SM-CMKGE 0 B1 2 pieces; 30% fibrous content in 1, blood vessel at center of other piece {10%) 7 Adipose Tissue Adipose - Subcutaneous 0002190 303 1162 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994293 346690 0.976434 0.995212 0.785433 22778 1 76 0.00219879 172 0 8.31205e+07 0.0232773 351172 8.35204e+07 6.50827e+06 22811 4.14213e+07 0 0.191001 0.995212 0.781673 8.31205e+07 0.00278935 1.83225e+07 7.96079e+06 1.84858e+07 201 1.8503e+07 1.40161e+07 0.0024938 1.83845e+07 49.8393 0.00420463 0.996132 0 50.2219 GTEX-1IDJF-0326-SM-ADEIG 1 B1 2 fragmented pieces; <1% internal fat; well trimmed 8.3 Muscle Muscle - Skeletal 0011907 313 1152 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.983252 478989 0.984126 0.989639 0.862767 20748 1 76 0.00315667 284 0 1.25236e+08 0.0156301 1.581e+06 1.26547e+08 1.34754e+07 20764 6.20801e+07 0 0.121359 0.989639 0.853828 1.25236e+08 0.00285205 2.68467e+07 2.10485e+07 2.75726e+07 325 2.78506e+07 2.29244e+07 0.00300534 2.72559e+07 49.4604 0.0124934 0.996026 0 50.6669 GTEX-1IDJF-0426-SM-ACKWL 0 B1 2 pieces; artery not nerve; well trimmed 7.9 Blood Vessel Artery - Tibial 0007610 317 1148 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993161 298529 0.976506 0.994411 0.846096 20918 1 76 0.0026379 276 0 1.03995e+08 0.0231106 539012 1.0458e+08 1.25334e+07 20934 5.18034e+07 0 0.130409 0.994411 0.841368 1.03995e+08 0.0035302 2.23392e+07 7.9547e+06 2.25523e+07 292 2.25104e+07 1.98289e+07 0.00308349 2.25038e+07 49.9926 0.00515408 0.995662 0 50.2374 GTEX-1IDJF-0726-SM-CJI1U 1 B1 2 pieces; no lesions 8.9 Heart Heart - Left Ventricle 0006566 346 1119 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993331 1.09626e+06 0.981565 0.99459 0.848914 22146 1 76 0.00192266 270 0 1.09228e+08 0.0182034 877594 1.09822e+08 6.98266e+06 22169 5.43907e+07 0 0.132652 0.99459 0.844321 1.09228e+08 0.00225942 2.39879e+07 1.62882e+07 2.43947e+07 327 2.45149e+07 2.08605e+07 0.00209083 2.39836e+07 49.4522 0.00799102 0.995848 0 50.4204 GTEX-1IDJF-0826-SM-ARU7N 0 B1 2 pieces; 40% & 5% fat content 9.4 Heart Heart - Atrial Appendage 0006631 379 1086 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993672 464251 0.978195 0.994786 0.82864 23133 1 76 0.00196076 269 0 9.45824e+07 0.0214889 934273 9.50782e+07 3.25128e+06 23155 4.71398e+07 0 0.149555 0.994786 0.824319 9.45824e+07 0.00247449 2.03441e+07 9.83896e+06 2.04628e+07 269 2.04902e+07 1.71678e+07 0.00221734 2.04018e+07 49.8919 0.00982637 0.995899 0 50.1455 GTEX-1IDJF-0926-SM-ARL85 0 B1 6 pieces; well trimmed, plaque-free; very good mural morphology 6.3 Blood Vessel Artery - Aorta 0001496 335 1130 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.988669 792621 0.970421 0.988886 0.772198 21502 1 76 0.00190102 130 0 6.33662e+07 0.0292129 316449 6.40784e+07 4.63458e+06 21527 3.14632e+07 0 0.198223 0.988886 0.763616 6.33662e+07 0.00256779 1.37408e+07 6.4383e+06 1.38274e+07 145 1.41274e+07 1.0545e+07 0.00223433 1.34543e+07 48.7798 0.00493847 0.989102 0 50.1571 GTEX-1IDJF-1126-SM-ARU7O 1 B1 6 pieces; well trimmed muscularis 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 357 1108 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992834 379643 0.975314 0.994098 0.803478 23253 1 76 0.00195843 212 0 8.67813e+07 0.0243874 543202 8.72965e+07 2.96016e+06 23284 4.32433e+07 0 0.171836 0.994098 0.798736 8.67813e+07 0.00275134 1.89915e+07 7.77072e+06 1.91446e+07 253 1.91529e+07 1.4603e+07 0.00235438 1.90779e+07 49.902 0.00622249 0.995361 0 50.2007 GTEX-1IDJF-1226-SM-C1YPX 1 B1 6 pieces; several foci of chronic esophagitis [circled] with lymphoid infiltrates 8.9 Esophagus Esophagus - Mucosa 0006920 368 1097 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988287 1.21979e+06 0.973445 0.991093 0.79603 23492 1 76 0.00187701 206 0 9.06609e+07 0.0262531 374917 9.14756e+07 4.17701e+06 23520 4.50557e+07 0 0.177415 0.991093 0.78894 9.06609e+07 0.00231602 2.03695e+07 1.1227e+07 2.03851e+07 206 2.05271e+07 1.79611e+07 0.00209589 2.04607e+07 49.919 0.00409855 0.993899 0 50.0191 GTEX-1IDJF-1326-SM-A9G2R 1 B1 6 pieces; well trimmed muscularis 8.6 Esophagus Esophagus - Muscularis 0004648 372 1093 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98316 196273 0.974768 0.989616 0.809134 23142 1 76 0.00390141 165 0 7.80233e+07 0.0249269 479662 7.88419e+07 7.48564e+06 23168 3.86775e+07 0 0.165633 0.989616 0.800732 7.80233e+07 0.00378302 1.6797e+07 7.52684e+06 1.70898e+07 173 1.72646e+07 1.36318e+07 0.00384338 1.70755e+07 49.7247 0.00608384 0.996072 0 50.432 GTEX-1IDJF-1426-SM-ACKWK 1 B1 6 pieces; 4 of 6 have well trimmed muscularis; 2 have 30% perimuscular stroma; none have mucosa; may be useful for comparison with other mucosa-free samples 7.8 Stomach Stomach 0000945 397 1068 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992135 320130 0.97354 0.993826 0.788608 24962 1 76 0.00270433 282 0 1.22601e+08 0.0261655 741258 1.23363e+08 1.58359e+07 25008 6.10612e+07 0 0.184932 0.993826 0.783739 1.22601e+08 0.0038134 2.68324e+07 1.31613e+07 2.70321e+07 315 2.70327e+07 1.98506e+07 0.00325792 2.7026e+07 49.9937 0.00600875 0.995517 0 50.1854 GTEX-1IDJF-1526-SM-A8N8Z 1 B1 2 pieces; slight congestion 6.9 Spleen Spleen 0002106 400 1065 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984546 422250 0.962747 0.986897 0.800016 25406 1 76 0.0115288 167 0 9.28711e+07 0.0359564 454802 9.41042e+07 1.77711e+07 25440 4.61022e+07 0 0.162731 0.986897 0.789533 9.28711e+07 0.0111533 2.03191e+07 1.82023e+07 2.05976e+07 188 2.06518e+07 1.47462e+07 0.0113415 2.04853e+07 49.7976 0.00483296 0.989247 0 50.3404 GTEX-1IDJF-1726-SM-A9SLL 0 B1 2 pieces; <5% fibrous content 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 399 1066 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990504 377086 0.976155 0.9918 0.812519 24469 1 76 0.0068089 205 0 9.94014e+07 0.0235578 535409 1.00223e+08 1.93251e+07 24499 4.95127e+07 0 0.163636 0.9918 0.805857 9.94014e+07 0.00733588 2.1844e+07 1.20862e+07 2.21121e+07 249 2.20956e+07 1.66449e+07 0.00707204 2.19764e+07 49.8648 0.00534216 0.993097 0 50.305 GTEX-1IDJF-1826-SM-CKZOE 1 B1 6 pieces: none have mucosa; could be used to compare muscularis with other mucosa-free samples 8 Colon Colon - Transverse 0001157 423 1042 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992184 391916 0.974881 0.994168 0.819175 24186 1 76 0.00195125 287 0 1.07998e+08 0.0247699 718910 1.08631e+08 1.06675e+07 24216 5.37901e+07 0 0.155706 0.994168 0.814398 1.07998e+08 0.00310363 2.35757e+07 9.99064e+06 2.37985e+07 326 2.38716e+07 1.98882e+07 0.00252629 2.36948e+07 49.8141 0.0066179 0.996153 0 50.2352 GTEX-1IDJF-2026-SM-CL53V 0 B1 6 pieces; large number of hair follicles sampled 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 404 1061 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99243 506781 0.971454 0.99398 0.782522 25702 1 76 0.00255499 288 0 1.07477e+08 0.0283057 645189 1.08128e+08 1.35798e+07 25745 5.35184e+07 0 0.188932 0.99398 0.777811 1.07477e+08 0.00384217 2.36344e+07 1.14191e+07 2.38669e+07 307 2.39078e+07 1.78858e+07 0.00319758 2.37533e+07 49.838 0.00596692 0.995531 0 50.2447 GTEX-1IDJF-2126-SM-AHZ2S 1 B1 2 pieces: larger is mostly muscular with peripheral ducts; smaller has more acinar tissue, but still mostly muscle 7.1 Prostate Prostate 0002367 422 1043 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988395 391414 0.96245 0.9899 0.74124 26914 1 76 0.0069718 207 0 1.03839e+08 0.0373053 659313 1.04898e+08 1.85655e+07 26963 5.1662e+07 0 0.22121 0.9899 0.733754 1.03839e+08 0.00841255 2.26048e+07 1.18469e+07 2.28807e+07 219 2.28397e+07 1.43948e+07 0.00769108 2.2791e+07 49.9466 0.00628526 0.991406 0 50.3033 GTEX-1IDJF-2226-SM-AHZ2T 1 B1 2 pieces; active spermatogenesis 7.1 Testis Testis 0000473 426 1039 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987072 581548 0.92872 0.988622 0.703832 35795 1 76 0.00688243 282 0 1.3442e+08 0.0709858 1.29078e+06 1.35968e+08 2.44674e+07 35897 6.68825e+07 0 0.224887 0.988622 0.695824 1.3442e+08 0.00820692 2.81876e+07 1.91124e+07 2.8342e+07 278 2.83965e+07 1.98043e+07 0.00754364 2.83124e+07 49.9259 0.00949327 0.990171 0 50.1366 GTEX-1IDJF-2326-SM-ARL86 1 B1 2 pieces; adipose tissue with 10% fibrous content in 1; no obvious mammary ducts 6.1 Breast Breast - Mammary Tissue 0008367 428 1037 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.988676 550535 0.974923 0.988666 0.825329 21565 1 76 0.00187195 150 0 6.57881e+07 0.0247778 336428 6.65422e+07 6.85832e+06 21586 3.26893e+07 0 0.149594 0.988666 0.815975 6.57881e+07 0.00239675 1.4371e+07 8.40455e+06 1.45196e+07 166 1.47804e+07 1.12248e+07 0.00213435 1.41116e+07 48.8426 0.00505586 0.988657 0 50.2571 GTEX-1IDJF-5004-SM-AN47Y B1 Muscle Muscle - Skeletal 0011907 313 ChIP-Seq GTEX-1IDJF-5007-SM-AN47X B1 Heart Heart - Left Ventricle 0006566 348 ChIP-Seq GTEX-1IDJH-0002-SM-G8OXI B1 Blood Whole Blood 0013756 756 BP-59255 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJH-0006-SM-CMKFT B1 8.9 Blood Whole Blood 0013756 756 BP-59256 RNA isolation_PAXgene Blood RNA (Manual) 01/02/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.989817 514774 0.980359 0.990772 0.772934 20691 1 76 0.00221391 276 0 1.19247e+08 0.0190488 499140 1.20358e+08 7.89781e+06 20718 5.94178e+07 0 0.207426 0.990772 0.765801 1.19247e+08 0.0031845 2.72166e+07 8.4281e+07 2.74312e+07 273 2.74405e+07 2.5549e+07 0.00269874 2.73274e+07 49.8967 0.00414714 0.991727 0 50.1963 GTEX-1IDJH-0011-R10a-SM-ARZLK B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 760 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988345 2.18154e+06 0.951723 0.990465 0.814502 23836 1 76 0.00234528 158 0 7.93514e+07 0.0475665 1.76585e+06 8.01153e+07 2.75154e+06 23855 3.93158e+07 0 0.137221 0.990465 0.806735 7.93514e+07 0.0032859 1.71217e+07 1.99083e+07 1.72527e+07 200 1.77726e+07 1.25252e+07 0.00281458 1.67535e+07 48.5242 0.0220413 0.992585 0 50.1906 GTEX-1IDJH-0011-R11b-SM-C1YRT B1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 760 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989678 947849 0.945331 0.992374 0.751504 24501 1 76 0.00194116 273 0 1.10676e+08 0.0542317 1.32673e+06 1.11526e+08 5.0147e+06 24543 5.50311e+07 0 0.193827 0.992374 0.745773 1.10676e+08 0.0023855 2.37168e+07 1.93797e+07 2.39633e+07 330 2.40735e+07 1.47968e+07 0.00216273 2.38715e+07 49.7894 0.0118961 0.995071 0 50.2584 GTEX-1IDJH-0011-R1b-SM-ARU6U B1, A1 6.1 Brain Brain - Hippocampus 0001954 760 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993464 486736 0.96488 0.994728 0.838785 23807 1 76 0.0019153 270 0 7.79235e+07 0.0347134 2.92243e+06 7.83365e+07 2.76067e+06 23833 3.88207e+07 0 0.126095 0.994728 0.834363 7.79235e+07 0.00256668 1.71163e+07 1.19393e+07 1.73483e+07 272 1.72993e+07 9.79497e+06 0.00224057 1.72461e+07 49.923 0.0373061 0.995991 0 50.3366 GTEX-1IDJH-0011-R3a-SM-CJI42 B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 760 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992747 1.31618e+06 0.961297 0.994349 0.839301 24228 1 76 0.00182802 371 0 9.75266e+07 0.0382811 3.87433e+06 9.80809e+07 5.94624e+06 24249 4.85337e+07 0 0.121996 0.994349 0.834558 9.75266e+07 0.00256805 2.12397e+07 1.70793e+07 2.1551e+07 362 2.16083e+07 1.25907e+07 0.00219744 2.131e+07 49.6525 0.0395014 0.995951 0 50.3637 GTEX-1IDJH-0011-R5a-SM-CE6SR B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 760 BP-71874 RNA isolation_PAXgene Tissue miRNA 02/17/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988802 731527 0.959973 0.990559 0.824254 24478 1 76 0.00743324 268 0 9.40109e+07 0.0397665 4.3645e+06 9.49069e+07 1.39188e+07 24501 4.67617e+07 0 0.13572 0.990559 0.816472 9.40109e+07 0.00754506 2.04602e+07 1.7933e+07 2.07095e+07 292 2.07129e+07 1.00767e+07 0.00748905 2.05975e+07 49.8603 0.0459871 0.992316 0 50.3028 GTEX-1IDJH-0011-R6a-SM-A9SLZ B1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 760 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989408 589330 0.95927 0.991317 0.826374 24330 1 76 0.00635027 198 0 8.47636e+07 0.0404074 3.69068e+06 8.55061e+07 1.49569e+07 24352 4.21842e+07 0 0.132896 0.991317 0.819198 8.47636e+07 0.00800749 1.83993e+07 1.56329e+07 1.87088e+07 240 1.86997e+07 1.0106e+07 0.00717728 1.85391e+07 49.7844 0.0431628 0.993225 0 50.417 GTEX-1IDJH-0011-R7a-SM-A9SM1 B1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 760 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989945 404651 0.960022 0.991702 0.827827 23687 1 76 0.00623739 151 0 7.52624e+07 0.0396854 3.74621e+06 7.58921e+07 1.26974e+07 23710 3.74676e+07 0 0.132195 0.991702 0.820958 7.52624e+07 0.00776744 1.63269e+07 1.33888e+07 1.66398e+07 197 1.66032e+07 8.41817e+06 0.00700106 1.64696e+07 49.7981 0.0493623 0.99346 0 50.4745 GTEX-1IDJH-0011-R8b-SM-ARZLL B1, A1 5.9 Brain Brain - Hypothalamus 0001898 760 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.984855 1.46011e+06 0.953982 0.987318 0.788548 23785 1 76 0.0024981 151 0 6.37387e+07 0.0457285 2.6594e+06 6.45574e+07 3.22961e+06 23805 3.15069e+07 0 0.165434 0.987318 0.778548 6.37387e+07 0.00361459 1.37237e+07 1.74797e+07 1.3833e+07 168 1.43466e+07 7.19751e+06 0.00305495 1.33342e+07 48.1713 0.0411944 0.989781 0 50.1983 GTEX-1IDJH-0011-R9a-SM-ADEIN B1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 760 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.982641 675294 0.957963 0.989258 0.815061 24316 1 76 0.00334581 389 0 1.08132e+08 0.0416688 2.0483e+06 1.09306e+08 1.1549e+07 24341 5.35706e+07 0 0.142902 0.989258 0.806306 1.08132e+08 0.00354896 2.36553e+07 1.44384e+07 2.42716e+07 335 2.43838e+07 1.51658e+07 0.00344671 2.418e+07 49.7902 0.0187392 0.995875 0 50.643 GTEX-1IDJH-0126-SM-D3L92 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~35-40 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 774 936 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991168 305190 0.976418 0.993196 0.776174 24409 1 76 0.00249436 224 0 9.2737e+07 0.0233588 400023 9.33724e+07 8.39595e+06 24444 4.61658e+07 0 0.200244 0.993196 0.770893 9.2737e+07 0.00397452 2.03939e+07 9.37462e+06 2.05146e+07 222 2.054e+07 1.53081e+07 0.00323293 2.05465e+07 50.0078 0.00428417 0.995223 0 50.1476 GTEX-1IDJH-0226-SM-CYPSB 0 B1 2 pieces, !0% tendinous insertion (delineated)/interstitial fat 8.7 Muscle Muscle - Skeletal 0011907 783 927 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995869 363846 0.985991 0.996512 0.881407 20015 1 76 0.00180148 269 0 1.03886e+08 0.0137715 930172 1.0425e+08 7.60486e+06 20029 5.18307e+07 0 0.104584 0.996512 0.878333 1.03886e+08 0.00206343 2.25908e+07 1.18372e+07 2.28005e+07 313 2.27e+07 2.09975e+07 0.00193237 2.27428e+07 50.0471 0.00892252 0.997155 0 50.231 GTEX-1IDJH-0326-SM-A9SLQ 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 784 926 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.98981 262697 0.969918 0.991274 0.775083 23181 1 76 0.00659045 147 0 7.23615e+07 0.0298395 315347 7.29985e+07 1.30417e+07 23208 3.60292e+07 0 0.194835 0.991274 0.76832 7.23615e+07 0.00789876 1.57707e+07 1.06997e+07 1.58928e+07 142 1.58918e+07 1.17534e+07 0.00724364 1.58742e+07 49.9723 0.00431991 0.992737 0 50.1928 GTEX-1IDJH-0526-SM-D4P38 0 B1 2 pieces, minimal atherosis; prominent Monckeberg sclerosis (rep delineated). Rim of adherent fibrous tissue up to ~1mm 6 Blood Vessel Artery - Tibial 0007610 787 923 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992594 180489 0.972944 0.9939 0.801752 22735 1 76 0.00257621 171 0 8.22139e+07 0.0267392 258057 8.27185e+07 1.05298e+07 22764 4.09417e+07 0 0.171192 0.9939 0.796861 8.22139e+07 0.00360464 1.77646e+07 6.71532e+06 1.79461e+07 195 1.79017e+07 1.41554e+07 0.00308975 1.79148e+07 50.0184 0.0031197 0.995206 0 50.2541 GTEX-1IDJH-0626-SM-ARZMC 0 B1 2 pieces, no adherent fat 7.4 Nerve Nerve - Tibial 0001323 789 921 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136,LCSET-8681 02/23/2016 TruSeq.v1 RNASEQ 0.98307 1.29982e+06 0.960412 0.984151 0.684073 25631 1 76 0.00255908 215 0 9.9894e+07 0.0392344 213589 1.01503e+08 6.67949e+06 25700 4.94976e+07 0 0.276339 0.984151 0.673231 9.9894e+07 0.00366212 2.17095e+07 1.0463e+07 2.21167e+07 207 2.27431e+07 1.42243e+07 0.00311 2.11835e+07 48.2248 0.00210427 0.985231 0 50.4645 GTEX-1IDJH-0726-SM-ARU7U 1 B1 2 pieces, mild congestion 7.7 Lung Lung 0008952 790 920 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.99297 273283 0.972403 0.994092 0.736949 22921 1 76 0.00224486 127 0 6.4758e+07 0.0272629 145497 6.51429e+07 2.19657e+06 22957 3.22592e+07 0 0.235453 0.994092 0.732595 6.4758e+07 0.00293634 1.43338e+07 5.10961e+06 1.44133e+07 140 1.44448e+07 1.03103e+07 0.00259021 1.43681e+07 49.8669 0.00223351 0.995214 0 50.1382 GTEX-1IDJH-0826-SM-CE6SY 1 B1 2 pieces, microndular goitre, degenerative/regressive changes 6.8 Thyroid Thyroid 0002046 791 919 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987915 438830 0.964777 0.989427 0.73593 25925 1 76 0.00802035 161 0 9.24516e+07 0.0349624 405935 9.34395e+07 1.52355e+07 25968 4.59757e+07 0 0.228847 0.989427 0.728149 9.24516e+07 0.00783663 2.01957e+07 9.99771e+06 2.029e+07 175 2.03689e+07 1.31774e+07 0.00792863 2.0253e+07 49.8574 0.00434436 0.990939 0 50.1165 GTEX-1IDJH-1026-SM-E9TKH 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 5.5 Heart Heart - Left Ventricle 0006566 795 915 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.981178 161128 0.991692 0.983616 0.839851 17976 1 76 0.00155103 368 0 9.44319e+07 0.00827288 6.14754e+06 9.60048e+07 4.07874e+06 17979 4.69789e+07 0 0.151841 0.983616 0.826091 9.44319e+07 0.00223512 2.02778e+07 5.41764e+07 2.08916e+07 425 2.02325e+07 3.69320e+06 0.00189223 2.10827e+07 51.029 0.0640336 0.986054 0 50.7454 GTEX-1IDJH-1126-SM-COH3R 1 B1 2 pieces, no abnormalities 7.4 Heart Heart - Atrial Appendage 0006631 797 913 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992194 294781 0.975562 0.993675 0.79103 22692 1 76 0.00332237 198 0 8.49891e+07 0.0241796 2.09618e+06 8.55301e+07 9.04609e+06 22721 4.23412e+07 0 0.184532 0.993675 0.786026 8.49891e+07 0.00410657 1.83274e+07 9.66614e+06 1.86105e+07 222 1.85627e+07 1.16798e+07 0.00371389 1.84806e+07 49.8892 0.0245081 0.995155 0 50.3832 GTEX-1IDJH-1226-SM-E6CJU 1 B1 2 pieces, 70% calcifying occlusive atherosis, rep delineated 6.4 Blood Vessel Artery - Coronary 0001621 804 906 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992291 244766 0.975266 0.993712 0.796853 21438 1 76 0.00198693 166 0 7.71775e+07 0.024224 178117 7.76659e+07 4.76486e+06 21466 3.84025e+07 0 0.178413 0.993712 0.791842 7.71775e+07 0.002629 1.67162e+07 5.43867e+06 1.68265e+07 175 1.67826e+07 1.51613e+07 0.00230751 1.68606e+07 50.1159 0.00229338 0.995133 0 50.1644 GTEX-1IDJH-1526-SM-A8N96 1 B1 2 pieces, mild macrovesicular steatosis, passive chronic congestion 6 Liver Liver 0001114 809 901 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.98651 240006 0.970924 0.989101 0.828197 21164 1 76 0.0107112 188 0 7.51148e+07 0.0289928 2.56129e+06 7.59424e+07 1.40612e+07 21175 3.73363e+07 0 0.142727 0.989101 0.819171 7.51148e+07 0.0107469 1.60944e+07 1.79474e+07 1.69213e+07 207 1.67954e+07 5.72494e+06 0.010729 1.63424e+07 49.3165 0.0337267 0.991693 0 51.2522 GTEX-1IDJH-1626-SM-A9SLP 1 B1 2 pieces, ~5% vascular/fascia elements, rep. delineated 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 811 899 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.991361 295316 0.97565 0.992914 0.792365 24085 1 76 0.00451745 206 0 9.2058e+07 0.0240969 711874 9.27149e+07 1.37803e+07 24111 4.58444e+07 0 0.183286 0.992914 0.78675 9.2058e+07 0.0054232 2.03133e+07 1.05234e+07 2.05435e+07 236 2.05485e+07 1.27242e+07 0.00496962 2.0448e+07 49.8775 0.00767809 0.994467 0 50.2817 GTEX-1IDJH-1726-SM-A96T3 1 B1 2 pieces, cortex, minimal adherent fat 6.5 Adrenal Gland Adrenal Gland 0002369 813 897 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990702 259317 0.971657 0.991984 0.802224 22070 1 76 0.00191363 268 0 7.46888e+07 0.0281363 3.43493e+06 7.52924e+07 2.53906e+06 22095 3.72331e+07 0 0.169433 0.991984 0.795793 7.46888e+07 0.00218833 1.61806e+07 9.44523e+06 1.64892e+07 260 1.64702e+07 8.04331e+06 0.0020508 1.6288e+07 49.722 0.0456212 0.993265 0 50.4724 GTEX-1IDJH-1826-SM-A96T4 1 B1 6 pieces, confirmed target muscularis; Adherent fat up to ~1mm 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 820 890 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.992713 176318 0.970346 0.99411 0.808001 21833 1 76 0.00188203 141 0 5.87744e+07 0.0294984 1.6283e+06 5.91227e+07 2.04149e+06 21856 2.92839e+07 0 0.162345 0.99411 0.803241 5.87744e+07 0.00252026 1.29034e+07 5.34636e+06 1.31598e+07 169 1.30939e+07 6.38933e+06 0.00220069 1.30419e+07 49.9006 0.027541 0.995507 0 50.4919 GTEX-1IDJH-1926-SM-ARU7T 1 B1 6 pieces, confirmed target muscularis 7 Esophagus Esophagus - Muscularis 0004648 822 888 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992389 316337 0.969903 0.993528 0.783113 22477 1 76 0.00206653 134 0 6.55251e+07 0.0298903 753426 6.59519e+07 2.38446e+06 22500 3.26444e+07 0 0.18679 0.993528 0.778045 6.55251e+07 0.00268186 1.40984e+07 5.6515e+06 1.42752e+07 158 1.42645e+07 9.58412e+06 0.00237384 1.41769e+07 49.846 0.0114239 0.994668 0 50.3115 GTEX-1IDJH-2026-SM-CNNQX 1 B1 6 pieces, squamous mucosa up to ~0.35mm, ~40-50% thickness 7.1 Esophagus Esophagus - Mucosa 0006920 822 888 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992337 332579 0.973816 0.99418 0.826046 23033 1 76 0.00240547 372 0 1.17437e+08 0.0258705 1.24336e+06 1.18124e+08 1.26938e+07 23050 5.85033e+07 0 0.14777 0.99418 0.821239 1.17437e+08 0.00356321 2.60966e+07 1.74089e+07 2.65105e+07 339 2.65157e+07 1.84274e+07 0.00298327 2.62946e+07 49.7907 0.0105259 0.996023 0 50.3935 GTEX-1IDJH-2226-SM-E6CJV 0 B1 2 pieces, fibroadipose elements only 5.6 Breast Breast - Mammary Tissue 0008367 828 882 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99275 194304 0.982275 0.994017 0.851545 23177 1 76 0.00186213 285 0 1.07336e+08 0.0173126 514672 1.07982e+08 6.90299e+06 23205 5.346e+07 0 0.13073 0.994017 0.84645 1.07336e+08 0.00256096 2.37126e+07 1.04246e+07 2.39261e+07 329 2.37976e+07 2.03994e+07 0.0022111 2.39601e+07 50.1701 0.00476626 0.995284 0 50.224 GTEX-1IDJH-2326-SM-D4P2K 2 B1 2 pieces, spermatogenesis appears reduced 6.3 Testis Testis 0000473 829 881 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992306 494337 0.921737 0.993439 0.712985 35324 1 76 0.00248081 292 0 1.38221e+08 0.0779432 1.52766e+06 1.39134e+08 1.67367e+07 35410 6.88976e+07 0 0.208752 0.993439 0.708307 1.38221e+08 0.0032417 2.82467e+07 2.19196e+07 2.85458e+07 321 2.85924e+07 2.09383e+07 0.00286082 2.83342e+07 49.7731 0.0109797 0.994571 0 50.2633 GTEX-1IDJH-2426-SM-CNNQW 2 B1 2 pieces, glandular copmponent appears cystic, nodular/hyperplastic glandular pattern 6.3 Prostate Prostate 0002367 830 880 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990263 240921 0.961382 0.992486 0.725135 26814 1 76 0.00246192 271 0 9.64183e+07 0.0384103 711311 9.71482e+07 1.02477e+07 26872 4.79937e+07 0 0.236247 0.992486 0.719686 9.64183e+07 0.00391962 2.09927e+07 1.05339e+07 2.12344e+07 263 2.12418e+07 1.23362e+07 0.00318914 2.11881e+07 49.9367 0.00732191 0.99471 0 50.2863 GTEX-1IDJH-2826-SM-CJI49 1 B1 6 pieces, confirmed target muscularis 6.3 Colon Colon - Sigmoid 0001159 839 871 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993501 498688 0.971998 0.994434 0.81987 22268 1 76 0.0019396 190 0 7.87775e+07 0.0278084 1.03645e+06 7.92185e+07 5.13853e+06 22291 3.92501e+07 0 0.152127 0.994434 0.815307 7.87775e+07 0.00240485 1.68205e+07 6.63283e+06 1.70625e+07 212 1.70588e+07 1.1986e+07 0.00217201 1.68989e+07 49.7646 0.0130834 0.995367 0 50.3572 GTEX-1IDJH-2926-SM-C1YQ5 1 B1 1 piece, adenohypophysis, partial rim of dura up to ~0.4mm 6.8 Pituitary Pituitary 0000007 877 833 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989779 825363 0.959754 0.992303 0.734988 26069 1 76 0.00194393 206 0 9.58036e+07 0.0400113 401204 9.65467e+07 4.36398e+06 26116 4.76192e+07 0 0.224766 0.992303 0.729331 9.58036e+07 0.00250757 2.02427e+07 1.08505e+07 2.04716e+07 230 2.05569e+07 1.44569e+07 0.00222503 2.03717e+07 49.7737 0.00415554 0.994827 0 50.2812 GTEX-1IDJH-3026-SM-CL53B 1 B1 5 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 880 830 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992953 836359 0.962391 0.994617 0.817886 26303 1 76 0.00231173 375 0 1.49063e+08 0.0371589 5.05218e+06 1.4987e+08 1.74897e+07 26344 7.42284e+07 0 0.144505 0.994617 0.813484 1.49063e+08 0.0037424 3.25559e+07 2.43747e+07 3.30433e+07 387 3.30717e+07 1.91592e+07 0.00302587 3.27413e+07 49.749 0.0337105 0.996282 0 50.3715 GTEX-1IDJH-3126-SM-C1YQS 1 B1 4 pieces, no abnormalities 7.3 Brain Brain - Cerebellum 0002037 883 827 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989444 758509 0.948258 0.991965 0.708086 24622 1 76 0.00203209 203 0 9.19582e+07 0.0513941 927656 9.2703e+07 4.17822e+06 24661 4.5717e+07 0 0.240173 0.991965 0.702397 9.19582e+07 0.0025014 1.98704e+07 1.21724e+07 2.00013e+07 228 2.00858e+07 1.16906e+07 0.00226615 1.99887e+07 49.8788 0.0100068 0.994487 0 50.1642 GTEX-1IDJI-0002-SM-G8OXG B1 Blood Whole Blood 0013756 -32 BP-59284 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/05/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJI-0006-SM-CMKFJ B1 7.7 Blood Whole Blood 0013756 -32 BP-59333 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.989578 659239 0.980006 0.990331 0.843536 19041 1 76 0.0024516 269 0 1.3082e+08 0.0190643 415335 1.32097e+08 9.7922e+06 19049 6.51649e+07 0 0.13647 0.990331 0.83538 1.3082e+08 0.00291796 3.06028e+07 1.33956e+08 3.07115e+07 300 3.07463e+07 3.56203e+07 0.0026846 3.06807e+07 49.9465 0.00314416 0.991084 0 50.0886 GTEX-1IDJI-0126-SM-CMKHS 1 B1 6 pieces; well trimmed 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 367 1234 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994318 283999 0.970304 0.995136 0.749254 24428 1 76 0.00237494 225 0 9.41892e+07 0.0294963 614633 9.46495e+07 6.7452e+06 24469 4.69559e+07 0 0.22105 0.995136 0.74561 9.41892e+07 0.00298577 2.07203e+07 9.53005e+06 2.08462e+07 221 2.08122e+07 1.4607e+07 0.00268011 2.08321e+07 50.0239 0.00649378 0.995955 0 50.1513 GTEX-1IDJI-0526-SM-CMKG4 1 B1 2 pieces; both include from 30-40% attached fat 7.3 Nerve Nerve - Tibial 0001323 397 1204 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993945 416590 0.965296 0.994952 0.711792 25205 1 76 0.00243717 217 0 9.67411e+07 0.0344142 404951 9.7232e+07 7.559e+06 25265 4.81987e+07 0 0.253505 0.994952 0.708198 9.67411e+07 0.00304782 2.12641e+07 8.96650e+06 2.1323e+07 210 2.1352e+07 1.48085e+07 0.00274218 2.13318e+07 49.9763 0.00416479 0.995958 0 50.0691 GTEX-1IDJI-0626-SM-C1YQD 1 B1 2 pieces; 1 piece include pleura (target is 1cm below pleura), diffuse pneumonia and fibrin deposition, edema 7.4 Lung Lung 0008952 410 1191 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990778 494264 0.970262 0.993083 0.756399 24691 1 76 0.00209372 166 0 9.10059e+07 0.0294778 261480 9.16397e+07 4.08196e+06 24732 4.52855e+07 0 0.213863 0.993083 0.751167 9.10059e+07 0.00269285 2.00124e+07 1.10982e+07 2.02597e+07 202 2.02992e+07 1.54498e+07 0.00239259 2.01666e+07 49.8362 0.00285335 0.995389 0 50.3071 GTEX-1IDJI-0726-SM-CM2RK 1 B1 2 pieces; medial calcific sclerosis, both include significant extraneous tissue (fat, vein) 6.9 Blood Vessel Artery - Tibial 0007610 420 1181 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993325 246482 0.971229 0.994464 0.794393 22989 1 76 0.00224041 200 0 8.47152e+07 0.0284671 507491 8.51868e+07 5.37215e+06 23016 4.21918e+07 0 0.176836 0.994464 0.789996 8.47152e+07 0.00283782 1.83004e+07 6.64089e+06 1.83871e+07 204 1.83687e+07 1.46861e+07 0.00253878 1.8417e+07 50.0657 0.00595739 0.995603 0 50.1182 GTEX-1IDJI-0926-SM-ACKWZ 1 B1 2 pieces; lobulated mature fat, central defects (?poor fixation) 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 437 1164 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992063 335966 0.972482 0.993687 0.790227 25647 1 76 0.00302315 284 0 1.23664e+08 0.0271715 844765 1.24449e+08 1.64048e+07 25699 6.15845e+07 0 0.182254 0.993687 0.785239 1.23664e+08 0.00374112 2.71365e+07 1.33546e+07 2.73457e+07 309 2.73852e+07 2.17809e+07 0.00338155 2.72881e+07 49.9112 0.00678802 0.995312 0 50.192 GTEX-1IDJI-1026-SM-A96TE 1 B1 2 pieces 8.5 Heart Heart - Left Ventricle 0006566 442 1159 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993177 185131 0.981424 0.994601 0.839728 21307 1 76 0.00223704 198 0 8.2735e+07 0.0183162 2.16496e+06 8.31841e+07 2.50956e+06 21324 4.12471e+07 0 0.141696 0.994601 0.835195 8.2735e+07 0.00278006 1.81479e+07 1.10908e+07 1.83283e+07 246 1.82256e+07 1.42676e+07 0.00250816 1.8346e+07 50.1645 0.0260261 0.996026 0 50.2473 GTEX-1IDJI-1226-SM-A8N9J 1 B1 2 pieces; islets are well visualized 6.3 Pancreas Pancreas 0001150 458 1143 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985041 185661 0.982815 0.987858 0.900417 20421 1 76 0.0111256 113 0 7.20109e+07 0.01656 134022 7.2896e+07 1.32806e+07 20427 3.57694e+07 0 0.0823975 0.987858 0.889485 7.20109e+07 0.011994 1.66701e+07 2.30387e+07 1.69408e+07 113 1.69696e+07 2.33523e+07 0.0115586 1.68671e+07 49.8485 0.00183854 0.990676 0 50.4027 GTEX-1IDJI-1726-SM-C1YQE 1 B1 2 pieces; myometrium 7.2 Uterus Uterus 0000995 476 1125 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989333 441591 0.970443 0.991716 0.754357 23775 1 76 0.00209224 279 0 1.01581e+08 0.0292361 212947 1.02429e+08 4.69187e+06 23825 5.05463e+07 0 0.216086 0.991716 0.748108 1.01581e+08 0.00249715 2.22008e+07 8.48479e+06 2.23994e+07 259 2.24376e+07 1.70132e+07 0.00229421 2.23852e+07 49.9415 0.00207897 0.994099 0 50.2226 GTEX-1IDJI-2226-SM-CKZPM 1 B1 6 pieces; target muscularis, small strip of residual mucosa 7 Colon Colon - Sigmoid 0001159 499 1102 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992827 203877 0.971942 0.994715 0.792902 23594 1 76 0.00223972 223 0 8.78176e+07 0.0277908 1.04304e+06 8.82843e+07 8.18126e+06 23622 4.37454e+07 0 0.17904 0.994715 0.788711 8.78176e+07 0.0034141 1.90928e+07 7.4077e+06 1.92081e+07 223 1.92119e+07 1.40398e+07 0.00282579 1.92396e+07 50.036 0.0118145 0.996602 0 50.1506 GTEX-1IDJI-2326-SM-A8N9I 2 B1 6 pieces; full thickness sections 7.8 Colon Colon - Transverse 0001157 503 1098 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983697 301535 0.968913 0.986489 0.780052 25573 1 76 0.0114592 168 0 9.46563e+07 0.0301585 1.40312e+06 9.59527e+07 1.6904e+07 25612 4.69852e+07 0 0.188861 0.986489 0.769513 9.46563e+07 0.0119644 2.07861e+07 1.52554e+07 2.11125e+07 187 2.11674e+07 1.31073e+07 0.0117111 2.09679e+07 49.7633 0.014623 0.989282 0 50.3896 GTEX-1IDJI-2526-SM-ACKWY 0 B1 3 pieces; 0, 20, and 40% salivary gland elements, remainder is fat, nerve, skeletal muscle, and vessels 6.5 Salivary Gland Minor Salivary Gland 0006330 517 1084 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 EXCLUDE 0.991716 187811 0.970081 0.993634 0.81743 23955 1 76 0.00306558 210 0 8.68364e+07 0.029693 796332 8.73928e+07 1.15309e+07 23986 4.32303e+07 0 0.152651 0.993634 0.812227 8.68364e+07 0.00420799 1.878e+07 9.56733e+06 1.90255e+07 231 1.89726e+07 1.41846e+07 0.00363568 1.89914e+07 50.0248 0.0091121 0.995552 0 50.3246 GTEX-1IDJI-5013-SM-AN47F B1 Heart Heart - Left Ventricle 0006566 445 ChIP-Seq GTEX-1IDJU-0001-SM-G8OXB B1 Blood Whole Blood 0013756 -29 BP-59284 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/05/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJU-0006-SM-CMKFK B1 8.3 Blood Whole Blood 0013756 -29 BP-59333 RNA isolation_PAXgene Blood RNA (Manual) 01/06/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.992629 1.02633e+06 0.946796 0.993772 0.769464 20522 1 76 0.00222805 164 0 9.56277e+07 0.0526436 234473 9.6227e+07 6.57314e+06 20542 4.7631e+07 0 0.177332 0.993772 0.764672 9.56277e+07 0.00342153 2.0848e+07 6.18538e+07 2.09613e+07 186 2.10229e+07 1.86561e+07 0.0028241 2.09248e+07 49.883 0.00243667 0.994916 0 50.1355 GTEX-1IDJU-0126-SM-CNNR2 1 C1 2 pieces; 1 with 30% external fat, other with 5% fat 9.4 Adrenal Gland Adrenal Gland 0002369 82 1304 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993255 155995 0.979504 0.994939 0.848721 21032 1 76 0.00214192 127 0 5.7782e+07 0.0201343 1.19346e+06 5.80759e+07 6.30799e+06 21043 2.87882e+07 0 0.130783 0.994939 0.844426 5.7782e+07 0.00282302 1.27642e+07 7.48354e+06 1.282e+07 147 1.28302e+07 9.70666e+06 0.0024819 1.28388e+07 50.0167 0.02055 0.996623 0 50.1091 GTEX-1IDJU-0226-SM-CKZOF 1 C1 2 pieces; well preserved without lesions 9 Lung Lung 0008952 85 1301 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991069 851541 0.972095 0.993153 0.808211 25620 1 76 0.00203659 381 0 1.19275e+08 0.0274541 419671 1.20097e+08 1.20442e+07 25667 5.93758e+07 0 0.163884 0.993153 0.802677 1.19275e+08 0.00310924 2.63298e+07 1.05787e+07 2.65103e+07 333 2.6636e+07 2.26068e+07 0.00257179 2.64331e+07 49.8088 0.00349443 0.995238 0 50.1708 GTEX-1IDJU-0326-SM-CGQEE 0 C1 2 pieces; 1 piece has 25% external fat; both have 5% internal fat 6.3 Pancreas Pancreas 0001150 88 1298 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993393 725022 0.978833 0.995126 0.851816 23995 1 76 0.00379143 374 0 2.00848e+08 0.0209086 676646 2.01831e+08 1.44458e+07 24032 1.00097e+08 0 0.127018 0.995126 0.847664 2.00848e+08 0.00366096 4.61099e+07 6.43757e+07 4.67516e+07 337 4.66659e+07 5.73077e+07 0.00372983 4.64923e+07 49.9068 0.00335253 0.996859 0 50.3455 GTEX-1IDJU-0426-SM-A8N91 1 C1 2 pieces; mild congestion; numerous foamy macrophages lining sinusoids 7.2 Spleen Spleen 0002106 90 1296 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985978 311947 0.963808 0.988279 0.76759 25370 1 76 0.010875 163 0 9.35305e+07 0.0355936 605073 9.46398e+07 1.62476e+07 25404 4.64781e+07 0 0.196218 0.988279 0.758594 9.35305e+07 0.0110748 2.04575e+07 1.1773e+07 2.07209e+07 186 2.0756e+07 1.38538e+07 0.0109747 2.0633e+07 49.8513 0.00639343 0.990581 0 50.3198 GTEX-1IDJU-0526-SM-ACKWM 1 C1 6 pieces; no plaques; loose adventitia focally 7.6 Blood Vessel Artery - Aorta 0001496 91 1295 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992855 330546 0.972924 0.994327 0.815678 23554 1 76 0.0026795 290 0 1.15877e+08 0.0266539 340807 1.16538e+08 1.58029e+07 23591 5.77138e+07 0 0.157246 0.994327 0.811051 1.15877e+08 0.00331799 2.50964e+07 9.5392e+06 2.53359e+07 304 2.53402e+07 2.08516e+07 0.00299827 2.52554e+07 49.9163 0.00292444 0.9958 0 50.2374 GTEX-1IDJU-0626-SM-CKZOG 0 C1 2 pieces; larger piece with 20% fibroadipose content; smaller with 60% 9 Heart Heart - Atrial Appendage 0006631 94 1292 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992292 460172 0.977066 0.994559 0.841019 22731 1 76 0.00177026 374 0 1.16273e+08 0.0223988 2.19985e+06 1.16909e+08 1.13287e+07 22753 5.78912e+07 0 0.136046 0.994559 0.836443 1.16273e+08 0.0032248 2.47334e+07 1.83571e+07 2.51541e+07 335 2.50604e+07 1.91109e+07 0.00249587 2.50315e+07 49.9711 0.0188167 0.996826 0 50.4216 GTEX-1IDJU-0726-SM-CNPQ9 1 C1 2 pieces; patchy myocardial scarring comprising 5% 9.3 Heart Heart - Left Ventricle 0006566 97 1289 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986263 574570 0.983902 0.989117 0.863542 22876 1 76 0.00520687 276 0 1.50537e+08 0.0158155 2.47992e+06 1.52193e+08 3.8251e+07 22897 7.48845e+07 0 0.120359 0.989117 0.854144 1.50537e+08 0.00813676 3.25904e+07 3.59503e+07 3.30508e+07 327 3.2995e+07 2.73032e+07 0.00666759 3.29895e+07 49.9958 0.0162946 0.991971 0 50.3507 GTEX-1IDJU-0826-SM-ARL87 0 C1 2 pieces; concentric mild to moderate fibrous plaques 8 Blood Vessel Artery - Coronary 0001621 103 1283 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137,LCSET-8790 03/22/2016 TruSeq.v1 RNASEQ 0.984168 1.82657e+06 0.969445 0.987709 0.805477 23755 1 76 0.00379717 201 0 9.62876e+07 0.0302158 567800 9.74859e+07 1.82778e+07 23791 4.76442e+07 0 0.163968 0.987709 0.795576 9.62876e+07 0.00575996 2.09028e+07 1.08411e+07 2.06605e+07 212 2.14786e+07 1.64897e+07 0.00477505 2.03992e+07 48.7113 0.00582444 0.991249 0 49.7085 GTEX-1IDJU-0926-SM-ARL88 0 C1 2 pieces; 1% fibrous content 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 106 1280 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.99089 1.03732e+06 0.970903 0.99124 0.803324 22054 1 76 0.00178126 134 0 6.23632e+07 0.02885 792135 6.29143e+07 3.56161e+06 22072 3.09721e+07 0 0.167578 0.99124 0.796287 6.23632e+07 0.00224882 1.36213e+07 1.0754e+07 1.35489e+07 158 1.39165e+07 8.97053e+06 0.00201496 1.32726e+07 48.8159 0.0125907 0.991589 0 49.8669 GTEX-1IDJU-1026-SM-AHZ2U 0 C1 6 pieces; no lesions 9.5 Vagina Vagina 0000996 108 1278 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988068 466345 0.973943 0.989637 0.775921 24206 1 76 0.00691616 225 0 1.05762e+08 0.0257547 346973 1.06869e+08 1.94498e+07 24239 5.26325e+07 0 0.198022 0.989637 0.767881 1.05762e+08 0.0087679 2.37265e+07 1.45845e+07 2.38776e+07 218 2.39051e+07 1.88939e+07 0.00784056 2.3858e+07 49.9507 0.00324671 0.991207 0 50.1587 GTEX-1IDJU-1126-SM-A9G2S 0 C1 2 pieces; corpora albicantia comprise 90% area 8.7 Ovary Ovary 0000992 111 1275 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.989798 190290 0.969573 0.99316 0.779185 24431 1 76 0.00376286 170 0 8.34735e+07 0.0300973 227431 8.40484e+07 7.59923e+06 24468 4.15122e+07 0 0.190388 0.99316 0.773855 8.34735e+07 0.0034673 1.81419e+07 7.43956e+06 1.84342e+07 184 1.85046e+07 1.47105e+07 0.00361751 1.83219e+07 49.7519 0.00270595 0.996522 0 50.3995 GTEX-1IDJU-1226-SM-A9G2T 0 C1 6 pieces; well trimmed muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 115 1271 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.989096 195045 0.975918 0.993018 0.828097 22123 1 76 0.00356918 224 0 8.68004e+07 0.023777 743924 8.74108e+07 7.67526e+06 22145 4.31485e+07 0 0.147822 0.993018 0.822315 8.68004e+07 0.00367157 1.86026e+07 7.70177e+06 1.89305e+07 242 1.89892e+07 1.49365e+07 0.00361951 1.88385e+07 49.8008 0.00851067 0.996939 0 50.4367 GTEX-1IDJU-1326-SM-ARU7P 0 C1 6 pieces; 3 pieces well trimmed; 3 pieces with up to 2.5mm perimuscular stroma 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 116 1270 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993097 299788 0.972792 0.994208 0.806827 22600 1 76 0.00193404 177 0 7.62054e+07 0.026967 727964 7.66494e+07 2.71249e+06 22623 3.79796e+07 0 0.165965 0.994208 0.802153 7.62054e+07 0.00251899 1.65586e+07 6.12316e+06 1.67774e+07 196 1.67288e+07 1.21827e+07 0.00222618 1.66819e+07 49.9297 0.00949732 0.995319 0 50.3281 GTEX-1IDJU-1426-SM-CNPQA 0 C1 6 pieces; mild to modereate squamous hyperplasia with parakeratosis 7.6 Esophagus Esophagus - Mucosa 0006920 119 1267 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 EXCLUDE 0.984621 382879 0.970951 0.987946 0.804938 25129 1 76 0.00547142 227 0 1.01962e+08 0.0288092 751475 1.03206e+08 2.57511e+07 25165 5.06825e+07 0 0.166014 0.987946 0.795235 1.01962e+08 0.00882206 2.2214e+07 1.27559e+07 2.25184e+07 241 2.25451e+07 1.66624e+07 0.0071411 2.25019e+07 49.9521 0.00728133 0.991271 0 50.3402 GTEX-1IDJU-1526-SM-CNNR3 1 C1 6 pieces; full thickness wall 7.7 Stomach Stomach 0000945 129 1257 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990649 208354 0.980739 0.992451 0.843869 24020 1 76 0.00224043 320 0 1.16609e+08 0.0188488 1.48333e+06 1.17496e+08 1.29841e+07 24050 5.81004e+07 0 0.136869 0.992451 0.837499 1.16609e+08 0.0031458 2.63308e+07 5.83809e+07 2.66676e+07 327 2.66692e+07 2.4993e+07 0.00269229 2.65169e+07 49.8568 0.0126245 0.994253 0 50.3177 GTEX-1IDJU-1626-SM-CJI4B 1 C1 2 pieces; 1% fibrosis 8 Thyroid Thyroid 0002046 130 1256 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993368 1.03756e+06 0.972056 0.994511 0.793839 24403 1 76 0.00198269 276 0 1.06003e+08 0.0273968 351531 1.06588e+08 6.61982e+06 24445 5.27906e+07 0 0.178217 0.994511 0.789482 1.06003e+08 0.00253183 2.32724e+07 9.79117e+06 2.34685e+07 285 2.35836e+07 2.04296e+07 0.00225695 2.32644e+07 49.6593 0.00329802 0.995654 0 50.2098 GTEX-1IDJU-1726-SM-CMKHU 0 C1 6 pieces; generally well trimmed; 10% dermal fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 134 1252 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994539 334213 0.966636 0.9955 0.76296 24325 1 76 0.00198923 291 0 9.86265e+07 0.0331799 720737 9.90723e+07 7.43629e+06 24366 4.91746e+07 0 0.203676 0.9955 0.759527 9.86265e+07 0.00271115 2.1469e+07 1.02702e+07 2.16818e+07 271 2.16529e+07 1.55184e+07 0.00234984 2.15888e+07 49.9259 0.00727486 0.996462 0 50.2465 GTEX-1IDJU-1826-SM-CMKHV 1 C1 2 pieces; atrophic ducts and lobular units in fibrofatty stroma 6.9 Breast Breast - Mammary Tissue 0008367 135 1251 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994925 394289 0.974119 0.995852 0.808667 23327 1 76 0.00201969 276 0 9.60761e+07 0.0255825 865143 9.64763e+07 7.11876e+06 23360 4.78994e+07 0 0.165452 0.995852 0.805313 9.60761e+07 0.00259795 2.0912e+07 1.14771e+07 2.13013e+07 310 2.13034e+07 1.47802e+07 0.00230855 2.09943e+07 49.6346 0.00896742 0.99678 0 50.461 GTEX-1IDJU-1926-SM-CL53W 1 C1 6 pieces: 1 with 1.5mm mucosal focus [labeled]; all with abundant submucosal stroma up to 1.6mm thick 8.4 Colon Colon - Sigmoid 0001159 142 1244 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.9937 738732 0.973925 0.995089 0.81 24725 1 76 0.00249822 392 0 1.46086e+08 0.0257536 882349 1.46807e+08 2.04185e+07 24774 7.27786e+07 0 0.163925 0.995089 0.806021 1.46086e+08 0.00333618 3.17285e+07 1.50393e+07 3.2115e+07 348 3.21834e+07 2.55701e+07 0.00291662 3.18482e+07 49.7382 0.00601027 0.996478 0 50.3027 GTEX-1IDJU-2026-SM-A9SLM 0 C1 6 pieces; well preserved mucosa; thick submucosa up to 1.6 mm 8.6 Colon Colon - Transverse 0001157 143 1243 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989625 218238 0.972245 0.991222 0.79652 23034 1 76 0.00648209 125 0 5.88404e+07 0.0272072 789632 5.93615e+07 1.04889e+07 23061 2.92919e+07 0 0.175724 0.991222 0.789528 5.88404e+07 0.00786401 1.29663e+07 7.12407e+06 1.30991e+07 120 1.31164e+07 8.82567e+06 0.00717194 1.30308e+07 49.8363 0.0133021 0.992818 0 50.2548 GTEX-1IDJU-2226-SM-ADEIH 0 C1 2 pieces; 10 & 20% internal & external fat 6.9 Nerve Nerve - Tibial 0001323 359 1027 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981893 409727 0.961505 0.988306 0.701138 25685 1 76 0.0034896 295 0 1.19304e+08 0.0382472 682326 1.20715e+08 1.28276e+07 25757 5.91091e+07 0 0.260367 0.988306 0.692939 1.19304e+08 0.00335676 2.59031e+07 1.20436e+07 2.62772e+07 310 2.65513e+07 1.57525e+07 0.00342361 2.63126e+07 49.7743 0.00565235 0.994719 0 50.3585 GTEX-1IDJU-2326-SM-ARL89 0 C1 2 pieces; well trimmed, no plaques 7.6 Blood Vessel Artery - Tibial 0007610 361 1025 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992705 540553 0.971771 0.992597 0.794912 21056 1 76 0.00178871 126 0 5.83079e+07 0.0278633 228703 5.87428e+07 3.57718e+06 21074 2.90014e+07 0 0.176859 0.992597 0.789027 5.83079e+07 0.00224784 1.26334e+07 4.5699e+06 1.26682e+07 137 1.27979e+07 1.03259e+07 0.0020183 1.2503e+07 49.4172 0.00389329 0.992489 0 50.0689 GTEX-1IDJU-2426-SM-ARZM9 0 C1 2 slightly fragmented pieces: 5% internal fat 7.8 Muscle Muscle - Skeletal 0011907 363 1023 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987291 960578 0.979134 0.990002 0.844285 19546 1 76 0.00204421 160 0 7.10915e+07 0.0206853 1.13719e+06 7.18094e+07 2.65074e+06 19554 3.52692e+07 0 0.134849 0.990002 0.835844 7.10915e+07 0.00340616 1.52461e+07 1.77552e+07 1.54994e+07 174 1.56488e+07 1.30928e+07 0.00272332 1.52451e+07 49.3467 0.0158362 0.992713 0 50.4119 GTEX-1IDJU-2526-SM-CMKGF 0 C1 2 pieces; 5 & 10% fibrovascular content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 366 1020 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994924 579858 0.968921 0.99583 0.791205 24331 1 76 0.00199661 380 0 1.2287e+08 0.0308142 1.21095e+06 1.23385e+08 8.69566e+06 24383 6.12684e+07 0 0.177715 0.99583 0.787906 1.2287e+08 0.00266281 2.66902e+07 2.03022e+07 2.71226e+07 343 2.71398e+07 1.86889e+07 0.00232941 2.67732e+07 49.66 0.0098144 0.996735 0 50.4018 GTEX-1IDJU-2626-SM-CM2RT 0 C1 6 pieces; generally well trimmed; 10% dermal fat 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 367 1019 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993749 399610 0.968341 0.995056 0.771297 24587 1 76 0.00194644 299 0 1.01379e+08 0.031433 549663 1.01882e+08 6.18158e+06 24630 5.05158e+07 0 0.197044 0.995056 0.767483 1.01379e+08 0.00259476 2.20729e+07 9.97604e+06 2.21262e+07 311 2.21817e+07 1.70874e+07 0.00227018 2.21421e+07 49.9553 0.00539508 0.996363 0 50.0602 GTEX-1IDJU-5004-SM-AN481 B1 Heart Heart - Left Ventricle 0006566 99 ChIP-Seq GTEX-1IDJU-5016-SM-AN47Z B1 Muscle Muscle - Skeletal 0011907 369 ChIP-Seq GTEX-1IDJV-0001-SM-G8OXC B1 Blood Whole Blood 0013756 657 BP-59284 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/05/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IDJV-0126-SM-COH3Y 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~40 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 633 667 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991908 258833 0.970041 0.993226 0.740195 23830 1 76 0.00373381 181 0 8.64173e+07 0.0297485 605757 8.70067e+07 9.63285e+06 23866 4.30518e+07 0 0.229846 0.993226 0.735181 8.64173e+07 0.00428032 1.89583e+07 8.51615e+06 1.90536e+07 187 1.9069e+07 1.29302e+07 0.0040067 1.9053e+07 49.979 0.00696219 0.994543 0 50.1254 GTEX-1IDJV-0426-SM-COH3Z 0 B1 2 pieces, ~30% interstitial fat, rep. delineated 7.7 Muscle Muscle - Skeletal 0011907 647 653 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993462 362761 0.978531 0.994624 0.853537 20873 1 76 0.00333156 288 0 1.07942e+08 0.0212744 1.90463e+06 1.08525e+08 1.06237e+07 20891 5.38191e+07 0 0.124993 0.994624 0.848949 1.07942e+08 0.00404483 2.3741e+07 1.25886e+07 2.39099e+07 324 2.38938e+07 1.93112e+07 0.00368778 2.38654e+07 49.9703 0.0175501 0.995786 0 50.1772 GTEX-1IDJV-0526-SM-COH41 0 B1 2 pieces, no significant adherent fat 7.3 Blood Vessel Artery - Tibial 0007610 653 647 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992983 335571 0.972852 0.994023 0.817425 22964 1 76 0.00355611 282 0 1.08856e+08 0.0267536 540470 1.09511e+08 1.15774e+07 22994 5.42406e+07 0 0.155427 0.994023 0.812539 1.08856e+08 0.00401961 2.35259e+07 8.27802e+06 2.36682e+07 305 2.36727e+07 2.02643e+07 0.00378762 2.36295e+07 49.9544 0.00493531 0.995063 0 50.1507 GTEX-1IDJV-0626-SM-CM2TS 0 B1 2 pieces, trace nubbins of adherent fat up to ~0.5mm, delineated 6.4 Nerve Nerve - Tibial 0001323 656 644 BP-72061 RNA Extraction from Paxgene-derived Lysate Plate Based 02/23/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992368 469594 0.965043 0.993706 0.718411 24068 1 76 0.00206407 178 0 8.45523e+07 0.034694 281506 8.50879e+07 4.74835e+06 24116 4.20872e+07 0 0.246632 0.993706 0.71389 8.45523e+07 0.00296383 1.85641e+07 6.67849e+06 1.85872e+07 193 1.86469e+07 1.1947e+07 0.00251334 1.86095e+07 49.9498 0.00330842 0.995043 0 50.0311 GTEX-1IDJV-2326-SM-A8N8S 1 B1 2 pieces, ~98% glandular parenchyma; trace rim of fat 6.5 Salivary Gland Minor Salivary Gland 0006330 738 562 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984738 336358 0.963709 0.987118 0.724403 25917 1 76 0.0112495 168 0 9.52355e+07 0.0356524 568110 9.64783e+07 1.79665e+07 25968 4.72988e+07 0 0.239306 0.987118 0.715071 9.52355e+07 0.0110108 2.09043e+07 1.46724e+07 2.12884e+07 180 2.13605e+07 1.19881e+07 0.0111304 2.10496e+07 49.6335 0.00588848 0.989499 0 50.4552 GTEX-1IE54-0004-SM-G8OXA B1 Blood Whole Blood 0013756 337 BP-59444 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IE54-0005-SM-CMKFQ B1 7.9 Blood Whole Blood 0013756 337 BP-59440 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.973136 394767 0.973116 0.974159 0.782372 17691 1 76 0.00198685 110 0 8.64782e+07 0.0257028 261950 8.87722e+07 6.65339e+06 17697 4.30417e+07 0 0.190744 0.974159 0.762154 8.64782e+07 0.00298817 2.01639e+07 1.41015e+08 2.02894e+07 143 2.02711e+07 1.97691e+07 0.00248699 2.02933e+07 50.0274 0.00295081 0.975182 0 50.1552 GTEX-1IE54-0126-SM-CMKHW 0 B1 6 pieces; include from 10-20% mostly internal fat, epidermis measures 38 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 387 568 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993664 403874 0.972358 0.994821 0.758651 25194 1 76 0.00228063 298 0 1.06588e+08 0.0273685 1.01644e+06 1.07142e+08 7.41418e+06 25243 5.31149e+07 0 0.213707 0.994821 0.754722 1.06588e+08 0.00309655 2.32833e+07 1.04347e+07 2.342e+07 282 2.346e+07 1.76361e+07 0.00268812 2.33592e+07 49.8924 0.00948677 0.995979 0 50.1462 GTEX-1IE54-0226-SM-CMKHX 0 B1 2 pieces; mature fat with 10-15% fibrous component 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 390 565 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994151 240167 0.974876 0.995112 0.791711 23099 1 76 0.00237881 197 0 8.44663e+07 0.024796 1.28346e+06 8.48811e+07 6.30187e+06 23123 4.20924e+07 0 0.183165 0.995112 0.787841 8.44663e+07 0.00325149 1.86728e+07 8.43876e+06 1.87855e+07 207 1.87928e+07 1.36671e+07 0.00281473 1.87463e+07 49.938 0.0151207 0.996073 0 50.1505 GTEX-1IE54-0326-SM-ARZMD 0 B1 2 pieces; 1 piece includes ~10% internal fat 8.8 Muscle Muscle - Skeletal 0011907 393 562 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.991318 664397 0.981856 0.993313 0.852321 19148 1 76 0.00245181 161 0 7.50211e+07 0.0178967 1.09771e+06 7.55261e+07 2.66337e+06 19156 3.73012e+07 0 0.129535 0.993313 0.846622 7.50211e+07 0.00342866 1.63048e+07 8.86206e+06 1.65128e+07 174 1.66274e+07 1.48433e+07 0.00293925 1.63132e+07 49.523 0.0145342 0.995308 0 50.3168 GTEX-1IE54-0426-SM-ARL8C 0 B1 2 pieces; <10% attached fat 7.4 Nerve Nerve - Tibial 0001323 396 559 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991322 891305 0.961925 0.991665 0.707537 23257 1 76 0.00203163 131 0 5.86654e+07 0.0377777 258963 5.91585e+07 3.00993e+06 23287 2.91495e+07 0 0.254389 0.991665 0.701639 5.86654e+07 0.0026522 1.2931e+07 5.99256e+06 1.28644e+07 128 1.31176e+07 8.7242e+06 0.0023418 1.26992e+07 49.1896 0.00437744 0.992007 0 49.8708 GTEX-1IE54-0526-SM-A9SLR 1 B1 2 pieces; 1 piece is well trimmed, 2nd has 40% attachment of fat/vein/nerve 7.9 Blood Vessel Artery - Tibial 0007610 401 554 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.990841 257114 0.976957 0.992202 0.822166 21200 1 76 0.00524218 138 0 6.90205e+07 0.0226515 495995 6.9563e+07 9.33932e+06 21213 3.43662e+07 0 0.154792 0.992202 0.815755 6.90205e+07 0.00645711 1.49385e+07 5.8245e+06 1.50846e+07 143 1.50919e+07 1.28159e+07 0.00584881 1.50198e+07 49.8803 0.00713016 0.993563 0 50.2433 GTEX-1IE54-0626-SM-ARL8D 0 B1 2 pieces; 10-20% fat with dense fibrocollagenous stroma with embedded benign ducts and lobules 7.7 Breast Breast - Mammary Tissue 0008367 422 533 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991926 603141 0.973833 0.991973 0.828198 22653 1 76 0.00206509 132 0 5.49815e+07 0.0251279 188960 5.54264e+07 3.46743e+06 22665 2.73087e+07 0 0.145635 0.991973 0.82155 5.49815e+07 0.00255933 1.21045e+07 6.49348e+06 1.21289e+07 131 1.23135e+07 1.09012e+07 0.0023122 1.19281e+07 49.2052 0.0034092 0.99202 0 50.0502 GTEX-1IE54-0826-SM-AHZ2Z 0 B1 3 pieces; excellent specimen, chronic sialadenitis, trivial attachment of skeletal muscle on 1 piece 8 Salivary Gland Minor Salivary Gland 0006330 475 480 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.986227 315640 0.970747 0.987807 0.767661 24359 1 76 0.00743385 158 0 7.94581e+07 0.0276525 308696 8.04389e+07 1.49159e+07 24384 3.94749e+07 0 0.203086 0.987807 0.7583 7.94581e+07 0.00879908 1.79078e+07 1.70305e+07 1.80936e+07 149 1.81083e+07 1.25164e+07 0.00811538 1.8015e+07 49.871 0.00383764 0.989386 0 50.2581 GTEX-1IE54-0926-SM-A9G2Y 1 B1 2 pieces; small attachments of fat/skeletal muscle (up to 10%), nodular hyperplasia 7.4 Thyroid Thyroid 0002046 484 471 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983297 213957 0.964002 0.989371 0.737923 24343 1 76 0.00396252 138 0 8.1259e+07 0.0356889 426490 8.2132e+07 7.55474e+06 24382 4.02876e+07 0 0.226079 0.989371 0.730079 8.1259e+07 0.00435761 1.75539e+07 9.15362e+06 1.78514e+07 151 1.80503e+07 1.3625e+07 0.00415628 1.78102e+07 49.6652 0.00519274 0.995445 0 50.4202 GTEX-1IE54-1126-SM-A9G2Z 0 B1 6 pieces; essentially well trimmed with small component of internal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 491 464 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983675 229726 0.973017 0.989703 0.759683 23265 1 76 0.00410594 155 0 6.9723e+07 0.0267097 540439 7.04484e+07 6.63188e+06 23297 3.45745e+07 0 0.213334 0.989703 0.751861 6.9723e+07 0.00427872 1.51701e+07 8.34161e+06 1.54267e+07 141 1.5587e+07 1.12425e+07 0.00419067 1.54006e+07 49.6992 0.00767142 0.995731 0 50.4194 GTEX-1IE54-1426-SM-CL53C 1 B1 2 pieces; lobulated mature fat, <10% fibrous tissue 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 502 453 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.98973 414731 0.976208 0.991828 0.77387 23848 1 76 0.00261707 213 0 1.02818e+08 0.0234816 783461 1.03665e+08 1.20911e+07 23884 5.11443e+07 0 0.202338 0.991828 0.767546 1.02818e+08 0.0047652 2.27705e+07 1.51596e+07 2.29393e+07 247 2.29862e+07 1.64718e+07 0.00368886 2.29362e+07 49.9455 0.00755764 0.993927 0 50.1846 GTEX-1IE54-2126-SM-A8N97 0 B1 2 pieces; few follicles and inclusion glands, focal calcifications 7 Ovary Ovary 0000992 556 399 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985303 204960 0.965209 0.987389 0.730216 23585 1 76 0.0115061 121 0 6.67057e+07 0.0345879 261820 6.75576e+07 1.33313e+07 23622 3.31462e+07 0 0.234992 0.987389 0.721008 6.67057e+07 0.0105251 1.45344e+07 9.33215e+06 1.46713e+07 122 1.46774e+07 1.01147e+07 0.0110166 1.46749e+07 49.9957 0.00387551 0.989476 0 50.2344 GTEX-1IE54-2626-SM-CMKFY 0 B1 6 pieces 6.7 Vagina Vagina 0000996 566 389 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993405 171292 0.975099 0.99435 0.781043 23527 1 76 0.00222576 201 0 8.71405e+07 0.0245868 868967 8.76356e+07 6.45778e+06 23551 4.34196e+07 0 0.194056 0.99435 0.77663 8.71405e+07 0.00288352 1.92099e+07 9.86143e+06 1.93152e+07 210 1.9288e+07 1.47976e+07 0.00255433 1.9326e+07 50.0493 0.00991568 0.995294 0 50.1367 GTEX-1IGQW-0002-SM-G8OXH C1 Blood Whole Blood 0013756 1136 BP-59444 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IGQW-0005-SM-CMKFR C1 7.4 Blood Whole Blood 0013756 1136 BP-59440 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.971287 702190 0.973271 0.972249 0.796783 19591 1 76 0.00222637 132 0 1.06926e+08 0.0256654 255336 1.09978e+08 7.48744e+06 19601 5.32333e+07 0 0.176488 0.972249 0.774671 1.06926e+08 0.00319376 2.47953e+07 1.56578e+08 2.5007e+07 164 2.50271e+07 2.78808e+07 0.00270959 2.49056e+07 49.8784 0.0023217 0.97321 0 50.2125 GTEX-1IGQW-0011-R11a-SM-C1YRV C1, A1 5.6 Brain Brain - Cerebellar Hemisphere 0002037 1165 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988497 717825 0.946045 0.991402 0.763618 23051 1 76 0.00200121 163 0 7.31773e+07 0.0536009 1.18967e+06 7.38119e+07 3.52021e+06 23077 3.6355e+07 0 0.182427 0.991402 0.757052 7.31773e+07 0.0027503 1.57829e+07 1.39258e+07 1.57972e+07 193 1.58306e+07 8.82063e+06 0.00237466 1.59381e+07 50.1693 0.0161176 0.994306 0 50.0226 GTEX-1IGQW-0011-R2b-SM-D4P26 C1, A1 6 Brain Brain - Substantia nigra 0002038 1165 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993608 232238 0.976773 0.995188 0.879723 21927 1 76 0.00245859 374 0 9.46183e+07 0.0230231 9.28678e+06 9.50759e+07 1.14036e+07 21938 4.71496e+07 0 0.0970494 0.995188 0.87549 9.46183e+07 0.00403906 2.0863e+07 1.83389e+07 2.16379e+07 382 2.13283e+07 9.16601e+06 0.00324757 2.1277e+07 49.9397 0.0976775 0.996767 0 50.9117 GTEX-1IGQW-0011-R5b-SM-CJI44 C1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 1165 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992756 1.05358e+06 0.963224 0.994144 0.832537 23727 1 76 0.00205839 372 0 1.12407e+08 0.0364868 7.36847e+06 1.13069e+08 7.24059e+06 23752 5.59897e+07 0 0.130687 0.994144 0.827661 1.12407e+08 0.00258843 2.39774e+07 4.27726e+07 2.49297e+07 370 2.48677e+07 1.16571e+07 0.00232304 2.41614e+07 49.2798 0.0651678 0.995532 0 50.9737 GTEX-1IGQW-0011-R6a-SM-CM2TC C1, A1 5.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1165 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992622 872151 0.954651 0.994292 0.853727 22790 1 76 0.00216872 370 0 1.11506e+08 0.045199 1.39291e+07 1.12146e+08 7.15406e+06 22810 5.55389e+07 0 0.100924 0.994292 0.848854 1.11506e+08 0.00298477 2.41894e+07 3.63652e+07 2.50215e+07 402 2.48591e+07 6.9642e+06 0.00257606 2.45167e+07 49.6533 0.124205 0.995962 0 50.8454 GTEX-1IGQW-0011-R9b-SM-D4P25 C1, A1 6.7 Brain Brain - Spinal cord (cervical c-1) 0006469 1165 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993604 308381 0.96061 0.995063 0.84613 22252 1 76 0.00248831 378 0 9.34962e+07 0.0392147 7.31496e+06 9.396e+07 1.10203e+07 22267 4.6592e+07 0 0.11448 0.995063 0.841952 9.34962e+07 0.00397745 2.03741e+07 1.70061e+07 2.1351e+07 377 2.08875e+07 8.1692e+06 0.00323179 2.09495e+07 50.0741 0.0778518 0.996522 0 51.1706 GTEX-1IGQW-0126-SM-COH42 0 C1 6 pieces, trace dermal fat; squamous epithelium is ~30 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1305 613 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992178 310026 0.973137 0.993388 0.762095 25445 1 76 0.00360301 224 0 1.00013e+08 0.0265679 348104 1.00679e+08 1.07943e+07 25489 4.98291e+07 0 0.211042 0.993388 0.757056 1.00013e+08 0.00420664 2.20127e+07 1.03896e+07 2.2113e+07 238 2.21266e+07 1.71434e+07 0.00390446 2.21172e+07 49.9894 0.00345756 0.994597 0 50.1136 GTEX-1IGQW-0226-SM-COH43 0 C1 2 pieces, fascial elements are ~5-10% of tissue, rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1307 611 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991193 253847 0.973284 0.992593 0.778414 23677 1 76 0.00363024 159 0 7.75247e+07 0.0263692 369132 7.81032e+07 8.00466e+06 23707 3.86049e+07 0 0.19487 0.992593 0.772648 7.75247e+07 0.00462255 1.69994e+07 8.13270e+06 1.70825e+07 170 1.70877e+07 1.31234e+07 0.0041257 1.71003e+07 50.0185 0.00472621 0.993993 0 50.122 GTEX-1IGQW-0326-SM-COH44 0 C1 2 pieces, trace adherent fat 6.9 Nerve Nerve - Tibial 0001323 1309 609 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990466 304794 0.962445 0.991791 0.693008 25280 1 76 0.00370786 163 0 8.28954e+07 0.0372554 181082 8.35815e+07 8.72252e+06 25331 4.12558e+07 0 0.269437 0.991791 0.687319 8.28954e+07 0.00465252 1.81596e+07 8.85664e+06 1.8197e+07 167 1.8208e+07 1.15427e+07 0.00417956 1.82581e+07 50.0688 0.00216653 0.993116 0 50.0514 GTEX-1IGQW-0426-SM-CM2RL 0 C1 2 pieces, trace atherosis; prominent Monckeberg sclerosis, rep delineated 6.8 Blood Vessel Artery - Tibial 0007610 1310 609 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992327 365929 0.975652 0.993715 0.813181 22617 1 76 0.00195915 199 0 8.93877e+07 0.0239414 231048 8.9953e+07 5.3512e+06 22643 4.44869e+07 0 0.16247 0.993715 0.80807 8.93877e+07 0.00297195 1.93838e+07 6.84266e+06 1.94674e+07 216 1.94944e+07 1.71484e+07 0.00246484 1.94835e+07 49.986 0.00256854 0.995102 0 50.1076 GTEX-1IGQW-0526-SM-CKZO3 0 C1 2 pieces, ~10% interstitial fat/vascular elements, rep delineated; foci of scarring/resolved myositis, rep. encircled 7.1 Muscle Muscle - Skeletal 0011907 1311 608 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991618 319679 0.971801 0.993802 0.807376 23162 1 76 0.00193898 162 0 8.69614e+07 0.0279331 605410 8.75038e+07 8.64215e+06 23185 4.32999e+07 0 0.164425 0.993802 0.802372 8.69614e+07 0.00348807 1.85713e+07 8.32205e+06 1.8775e+07 200 1.88342e+07 1.60312e+07 0.00271182 1.86788e+07 49.7929 0.00691867 0.995986 0 50.2726 GTEX-1IGQW-0626-SM-C1YR9 1 C1 2 pieces, regressive changes, micronodular goitre 6 Thyroid Thyroid 0002046 1313 607 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.989568 312063 0.962675 0.991912 0.782871 24624 1 76 0.00228095 171 0 8.00037e+07 0.0369885 277443 8.0656e+07 7.24395e+06 24659 3.98084e+07 0 0.179804 0.991912 0.776539 8.00037e+07 0.00325198 1.732e+07 8.06433e+06 1.74367e+07 182 1.74657e+07 1.40400e+07 0.00276532 1.74684e+07 50.0038 0.00343983 0.994256 0 50.168 GTEX-1IGQW-0926-SM-ADEH6 1 C1 2 pieces fibroadipose elements, gynecomastoid stromal hyerplasia; trace ductal elements, encircled 5.9 Breast Breast - Mammary Tissue 0008367 1322 599 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981502 323017 0.977256 0.987961 0.777317 23065 1 76 0.00354823 167 0 7.90458e+07 0.022428 251787 8.0009e+07 8.92587e+06 23093 3.91532e+07 0 0.199939 0.987961 0.767959 7.90458e+07 0.00350723 1.73235e+07 9.51149e+06 1.76484e+07 174 1.78617e+07 1.35445e+07 0.00352787 1.75755e+07 49.5961 0.00314698 0.99442 0 50.4645 GTEX-1IGQW-2326-SM-CE6RV 3 C1 6 pieces, target muscosa up to ~0.3mm, 10-20% thickness, with complete glandular mucosal autolysis, lamina propria intact 5.6 Colon Colon - Transverse 0001157 1359 569 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988678 339131 0.96938 0.989965 0.799356 24357 1 76 0.00811584 137 0 7.81484e+07 0.0302187 406743 7.89406e+07 1.34e+07 24381 3.8875e+07 0 0.170024 0.989965 0.791334 7.81484e+07 0.00762667 1.69497e+07 7.80602e+06 1.70615e+07 151 1.70792e+07 1.29692e+07 0.00787158 1.70312e+07 49.9297 0.00515252 0.991251 0 50.1644 GTEX-1IGQW-2726-SM-A8N9K 1 C1 4 pieces, no abnormalities 6.5 Brain Brain - Cerebellum 0002037 1387 543 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984034 568734 0.939695 0.986787 0.73157 25255 1 76 0.0109609 157 0 9.24473e+07 0.0599691 1.56042e+06 9.36852e+07 1.6723e+07 25293 4.59067e+07 0 0.208125 0.986787 0.721904 9.24473e+07 0.0112356 1.9628e+07 2.64202e+07 2.00663e+07 192 2.01375e+07 1.00051e+07 0.0110979 1.97992e+07 49.5765 0.016656 0.98954 0 50.5522 GTEX-1IGQW-2926-SM-CNPQJ 1 C1 1 piece, largely adenohypophysis; ~2.5mm nodule of neurohypophysis, delineated 5.6 Pituitary Pituitary 0000007 1390 541 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983379 325505 0.961506 0.986825 0.762493 26125 1 76 0.00588316 150 0 8.20039e+07 0.0382003 1.19737e+06 8.30988e+07 2.18472e+07 26166 4.07309e+07 0 0.199013 0.986825 0.752447 8.20039e+07 0.00910585 1.75791e+07 1.43558e+07 1.77804e+07 171 1.78639e+07 1.08477e+07 0.00748888 1.77632e+07 49.8588 0.014409 0.990271 0 50.2847 GTEX-1IKJJ-0004-SM-G8OX2 B1 Blood Whole Blood 0013756 1084 BP-59444 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IKJJ-0005-SM-CMKFS B1 7.3 Blood Whole Blood 0013756 1084 BP-59440 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.967203 542965 0.983364 0.968118 0.799713 19238 1 76 0.00214125 192 0 1.33523e+08 0.0153287 214019 1.3792e+08 1.00041e+07 19250 6.64618e+07 0 0.183652 0.968118 0.774216 1.33523e+08 0.00294785 3.18106e+07 2.31777e+08 3.19443e+07 250 3.20362e+07 3.83981e+07 0.00254417 3.18568e+07 49.8596 0.00155176 0.969032 0 50.1049 GTEX-1IKJJ-0011-R2b-SM-ARZLJ B1, A1 6 Brain Brain - Substantia nigra 0002038 1046 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985453 1.03904e+06 0.959658 0.988071 0.809199 23068 1 76 0.00270079 152 0 6.3719e+07 0.0400492 2.75719e+06 6.44883e+07 2.6453e+06 23089 3.15528e+07 0 0.150459 0.988071 0.799546 6.3719e+07 0.00379108 1.36213e+07 1.78056e+07 1.41888e+07 172 1.43726e+07 7.5668e+06 0.00324449 1.35704e+07 48.5646 0.0427549 0.990689 0 51.0203 GTEX-1IKJJ-0011-R3b-SM-C1YRW B1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1046 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987405 1.00037e+06 0.961503 0.990538 0.842892 24834 1 76 0.00188765 373 0 1.09696e+08 0.0380408 3.52589e+06 1.10743e+08 4.77415e+06 24854 5.45031e+07 0 0.118612 0.990538 0.834916 1.09696e+08 0.00244841 2.40558e+07 1.89848e+07 2.39504e+07 340 2.39823e+07 1.39339e+07 0.00216714 2.43219e+07 50.3515 0.0318384 0.993672 0 49.8902 GTEX-1IKJJ-0011-R5b-SM-CE6SL B1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 1046 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989101 1.02935e+06 0.951827 0.990855 0.814958 25113 1 76 0.00784899 269 0 1.04996e+08 0.0478282 3.8606e+06 1.05965e+08 1.65016e+07 25139 5.22286e+07 0 0.13687 0.990855 0.807505 1.04996e+08 0.00789113 2.26013e+07 3.05145e+07 2.29483e+07 293 2.29964e+07 1.21e+07 0.00787002 2.27169e+07 49.6943 0.0364328 0.99261 0 50.3808 GTEX-1IKJJ-0011-R7a-SM-ARZLH B1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 1046 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987581 1.53151e+06 0.953795 0.99014 0.794618 24224 1 76 0.00256509 201 0 8.45719e+07 0.0458304 3.18293e+06 8.5414e+07 3.18034e+06 24251 4.19429e+07 0 0.159177 0.99014 0.786783 8.45719e+07 0.00381466 1.82035e+07 2.48982e+07 1.83488e+07 248 1.86878e+07 1.07297e+07 0.00318826 1.80432e+07 49.1225 0.0372647 0.992699 0 50.1989 GTEX-1IKJJ-0011-R9a-SM-ARZLI B1, A1 6.7 Brain Brain - Spinal cord (cervical c-1) 0006469 1046 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985501 1.29677e+06 0.953194 0.987975 0.80684 23641 1 76 0.00262748 163 0 6.97895e+07 0.0464125 1.74736e+06 7.06389e+07 3.19362e+06 23660 3.45723e+07 0 0.146354 0.987975 0.797138 6.97895e+07 0.00362917 1.49248e+07 2.15202e+07 1.54236e+07 180 1.57119e+07 9.31433e+06 0.00312707 1.47804e+07 48.4725 0.0247365 0.990449 0 50.8219 GTEX-1IKJJ-0126-SM-CNPQB 0 B1 6 pieces, trace dermal fat, rep delineated; squamous epithelium is ~40-50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1209 1077 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985873 335995 0.972242 0.988498 0.774554 23923 1 76 0.00583966 200 0 8.73941e+07 0.0274249 254219 8.8411e+07 2.32973e+07 23956 4.34551e+07 0 0.197688 0.988498 0.765645 8.73941e+07 0.00773683 1.89499e+07 1.16401e+07 1.90766e+07 170 1.9162e+07 1.5243e+07 0.00678572 1.90811e+07 49.8942 0.00287542 0.991123 0 50.1666 GTEX-1IKJJ-0226-SM-COH3T 0 B1 2 pieces, 10-15% fascia/vascular elements, rep delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1214 1072 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991713 262882 0.972583 0.993151 0.79556 23125 1 76 0.00352878 157 0 7.13468e+07 0.0270962 225491 7.18388e+07 7.35236e+06 23151 3.55299e+07 0 0.177023 0.993151 0.790111 7.13468e+07 0.00443826 1.56498e+07 6.87724e+06 1.57187e+07 160 1.57305e+07 1.25147e+07 0.00398286 1.57384e+07 50.0124 0.00313885 0.994589 0 50.1098 GTEX-1IKJJ-0326-SM-CL55L 0 B1 2 pieces, 5-10% interstitial fat/vascular elements 8.4 Muscle Muscle - Skeletal 0011907 1216 1070 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.99413 573354 0.982508 0.995596 0.873434 22010 1 76 0.0023541 374 0 1.43984e+08 0.0172141 1.35912e+06 1.44621e+08 1.91761e+07 22031 7.17516e+07 0 0.109074 0.995596 0.869588 1.43984e+08 0.00356787 3.05414e+07 1.564e+07 3.1068e+07 349 3.11039e+07 3.01528e+07 0.00296009 3.06805e+07 49.6573 0.00939776 0.997062 0 50.4274 GTEX-1IKJJ-0426-SM-CM2TT 0 B1 2 pieces, no significant adherent fat 6.6 Nerve Nerve - Tibial 0001323 1217 1069 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99241 260768 0.960773 0.993495 0.708871 25036 1 76 0.00221721 223 0 9.24497e+07 0.0389851 393638 9.3055e+07 5.8362e+06 25089 4.60366e+07 0 0.251902 0.993495 0.70426 9.24497e+07 0.00285427 2.0244e+07 9.00102e+06 2.03248e+07 226 2.03358e+07 1.19628e+07 0.00253539 2.03298e+07 49.9926 0.00423017 0.994579 0 50.0996 GTEX-1IKJJ-0526-SM-CMKG8 0 B1 2 pieces no adherent fat, minimal atherosis; prominent Monckeberg medial sclerosis, rep delineated 6.5 Blood Vessel Artery - Tibial 0007610 1217 1069 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994202 294027 0.974346 0.995006 0.824521 23280 1 76 0.00207801 273 0 9.92921e+07 0.0252261 598716 9.97904e+07 7.4293e+06 23307 4.94756e+07 0 0.149825 0.995006 0.820403 9.92921e+07 0.0027411 2.14142e+07 7.91285e+06 2.1547e+07 263 2.15436e+07 1.92039e+07 0.00240928 2.15007e+07 49.9502 0.00599973 0.995809 0 50.1546 GTEX-1IKJJ-0626-SM-CY8GF 1 B1 2 pieces, no abnormalities 7.1 Heart Heart - Atrial Appendage 0006631 1282 1004 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989523 440243 0.974383 0.991536 0.783639 23739 1 76 0.0047789 161 0 8.80338e+07 0.0253412 1.40551e+06 8.87853e+07 1.00797e+07 23776 4.38104e+07 0 0.190745 0.991536 0.777006 8.80338e+07 0.00769338 1.91679e+07 8.61272e+06 1.95078e+07 188 1.95218e+07 1.32146e+07 0.00623318 1.93104e+07 49.7278 0.0158304 0.993549 0 50.4395 GTEX-1IKJJ-0826-SM-A96SP 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic changes 6.2 Heart Heart - Left Ventricle 0006566 1286 1000 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993334 117528 0.98892 0.994587 0.863153 17975 1 76 0.00237266 261 0 7.82089e+07 0.0110373 7.55555e+06 7.86346e+07 2.41114e+06 17976 3.89976e+07 0 0.125767 0.994587 0.85848 7.82089e+07 0.00265087 1.72268e+07 2.92061e+07 1.77017e+07 295 1.76628e+07 3.17576e+06 0.00251159 1.73395e+07 49.5381 0.0960843 0.99584 0 50.6798 GTEX-1IKJJ-0926-SM-A9G2L 1 B1 2 pieces, marked edema and congestion, evidence of chronicity 6.5 Lung Lung 0008952 1288 998 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.988093 263571 0.969896 0.991376 0.715973 24818 1 76 0.00364431 160 0 8.50487e+07 0.0298101 356455 8.57886e+07 6.33029e+06 24869 4.22478e+07 0 0.253923 0.991376 0.709798 8.50487e+07 0.00381043 1.85911e+07 9.76388e+06 1.88748e+07 176 1.89345e+07 1.16801e+07 0.00372634 1.87931e+07 49.8126 0.00415504 0.994659 0 50.3786 GTEX-1IKJJ-1026-SM-A96SQ 1 B1 2 pieces, goitre with regressive changes 6.7 Thyroid Thyroid 0002046 1294 992 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991595 244825 0.969535 0.992885 0.715539 24026 1 76 0.00228229 137 0 7.14195e+07 0.030191 328408 7.19314e+07 2.5942e+06 24065 3.55832e+07 0 0.253996 0.992885 0.710448 7.14195e+07 0.0025035 1.57536e+07 6.91155e+06 1.58733e+07 156 1.59029e+07 9.79087e+06 0.00239275 1.58124e+07 49.8573 0.00456557 0.994174 0 50.1892 GTEX-1IKJJ-1126-SM-A9G2M 1 B1 6 pieces, confirmed target muscularis 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1306 980 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983346 147086 0.971642 0.989323 0.824261 21668 1 76 0.00437928 128 0 6.06216e+07 0.0282195 1.97758e+06 6.12759e+07 6.2004e+06 21685 3.00501e+07 0 0.147381 0.989323 0.81546 6.06216e+07 0.00449456 1.30918e+07 7.15878e+06 1.35613e+07 156 1.36258e+07 5.79422e+06 0.00443582 1.33426e+07 49.4751 0.0322733 0.9953 0 50.8808 GTEX-1IKJJ-1526-SM-C1YSC 1 B1 2 pieces, macro and microvesicular steatosis involves ~50% of parenchyma. Mild passive congestion 6.9 Liver Liver 0001114 1311 975 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990969 462626 0.974195 0.993501 0.819011 22071 1 76 0.001936 268 0 9.74196e+07 0.0256145 1.15776e+06 9.80569e+07 4.26454e+06 22094 4.84736e+07 0 0.155183 0.993501 0.813688 9.74196e+07 0.00250882 2.12129e+07 1.18554e+07 2.1475e+07 320 2.14724e+07 1.55832e+07 0.00222168 2.14273e+07 49.9475 0.011807 0.996033 0 50.3069 GTEX-1IKJJ-2126-SM-C1YQU 1 B1 2 pieces, spermatogenesis is present but appears reduced 6.4 Testis Testis 0000473 1350 936 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.986905 444629 0.922137 0.989345 0.700254 32446 1 76 0.0020933 151 0 7.3664e+07 0.0775438 498548 7.44574e+07 3.47572e+06 32510 3.66375e+07 0 0.221883 0.989345 0.692792 7.3664e+07 0.00247634 1.51892e+07 1.02697e+07 1.50589e+07 146 1.51376e+07 1.12398e+07 0.00228435 1.52593e+07 50.2001 0.00669575 0.991784 0 49.7846 GTEX-1IKJJ-2226-SM-CJI4C 0 B1 2 pieces, trace adherent and minimal intra-dermal fat, rep delineated. Squamous epithelium is ~30-40 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1356 930 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993157 782786 0.97864 0.994235 0.803792 23053 1 76 0.00208418 233 0 9.58713e+07 0.0210736 333838 9.64272e+07 5.93272e+06 23088 4.77505e+07 0 0.174848 0.994235 0.799158 9.58713e+07 0.00267171 2.10772e+07 1.11204e+07 2.12103e+07 239 2.13383e+07 1.78808e+07 0.00237762 2.1046e+07 49.6551 0.00346207 0.995313 0 50.1573 GTEX-1IKJJ-2326-SM-COH3U 1 B1 2 pieces, mainly fibroadipose elements. Trace ductal elements encircled 6.6 Breast Breast - Mammary Tissue 0008367 1360 926 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99049 230357 0.969328 0.991914 0.700936 24436 1 76 0.0036584 136 0 6.76189e+07 0.0304108 340575 6.81701e+07 6.76965e+06 24476 3.36638e+07 0 0.268391 0.991914 0.695269 6.76189e+07 0.00454252 1.49478e+07 7.25568e+06 1.49888e+07 141 1.50061e+07 9.43526e+06 0.00409982 1.50236e+07 50.0291 0.00499596 0.993338 0 50.0684 GTEX-1IKJJ-2826-SM-A8N8T 1 B1 2 pieces, glandular parenchyma is ~95% of specimen, trace adherent fibrous nubbin up to 0.2mm 8.1 Salivary Gland Minor Salivary Gland 0006330 1370 916 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984215 343838 0.972833 0.986437 0.778384 25310 1 76 0.0112522 254 0 1.02033e+08 0.0260238 271400 1.03436e+08 1.95393e+07 25360 5.06671e+07 0 0.194449 0.986437 0.767827 1.02033e+08 0.010614 2.28754e+07 2.60738e+07 2.34424e+07 229 2.35304e+07 1.66795e+07 0.0109338 2.30121e+07 49.4432 0.00262383 0.988658 0 50.6121 GTEX-1IKJJ-2926-SM-A9G2N 1 B1 4 pieces, no abnormalities 5.7 Brain Brain - Cortex 0001870 1431 855 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987463 328430 0.957746 0.992064 0.830457 22305 1 76 0.00432087 151 0 6.48072e+07 0.0420268 3.78877e+06 6.53257e+07 6.52107e+06 22317 3.21927e+07 0 0.127289 0.992064 0.823866 6.48072e+07 0.00396424 1.39096e+07 2.27734e+07 1.43384e+07 180 1.43303e+07 5.39913e+06 0.00414572 1.4153e+07 49.6888 0.0579982 0.996664 0 50.759 GTEX-1IKJJ-3126-SM-CNNR4 1 B1 1 piece, ~70% adenohypophysis, ~20% neurohypophysis (delineated), ~10% dura 8.1 Pituitary Pituitary 0000007 1436 850 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992897 347918 0.957966 0.994454 0.741409 27307 1 76 0.00222544 274 0 1.18805e+08 0.041735 463920 1.19468e+08 1.08322e+07 27367 5.91964e+07 0 0.216557 0.994454 0.737297 1.18805e+08 0.00317509 2.50792e+07 1.53595e+07 2.52073e+07 277 2.5281e+07 1.86616e+07 0.00269952 2.51691e+07 49.8891 0.00388323 0.996011 0 50.1274 GTEX-1IKK5-0003-SM-G8OX3 B1 Blood Whole Blood 0013756 397 BP-59444 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IKK5-0006-SM-CMKFI B1 8.4 Blood Whole Blood 0013756 397 BP-59440 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.975561 629506 0.983066 0.976342 0.803866 18852 1 76 0.0022866 263 0 1.39077e+08 0.0158939 140482 1.42447e+08 8.88745e+06 18862 6.92751e+07 0 0.1792 0.976342 0.784848 1.39077e+08 0.00315413 3.3177e+07 1.99457e+08 3.31672e+07 286 3.31882e+07 3.75466e+07 0.00272002 3.32844e+07 50.0724 0.000986207 0.977122 0 49.9926 GTEX-1IKK5-0011-R10b-SM-CE6SP B1, A1 5.8 Brain Brain - Frontal Cortex (BA9) 0009834 437 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988434 378293 0.967824 0.990366 0.858929 22172 1 76 0.0081598 131 0 6.01763e+07 0.0318582 3.53709e+06 6.07617e+07 9.52385e+06 22182 2.99216e+07 0 0.108894 0.990366 0.850654 6.01763e+07 0.00836769 1.31774e+07 1.00369e+07 1.33982e+07 150 1.33453e+07 6.81222e+06 0.00826354 1.33248e+07 49.9616 0.0582124 0.992297 0 50.4154 GTEX-1IKK5-0011-R11a-SM-C1YRX B1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 437 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988872 1.29399e+06 0.937469 0.991734 0.741907 24566 1 76 0.00212066 277 0 1.11763e+08 0.0620335 1.53949e+06 1.12695e+08 4.757e+06 24605 5.55691e+07 0 0.195562 0.991734 0.735775 1.11763e+08 0.00268584 2.39727e+07 4.73691e+07 2.41597e+07 321 2.4303e+07 1.42689e+07 0.00240244 2.41177e+07 49.8087 0.0136607 0.994595 0 50.1942 GTEX-1IKK5-0011-R1b-SM-CE6SQ B1, A1 6.2 Brain Brain - Hippocampus 0001954 437 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.986852 846013 0.964995 0.989195 0.834356 25185 1 76 0.00830424 370 0 1.20833e+08 0.0347508 9.96404e+06 1.22153e+08 1.92944e+07 25212 6.00306e+07 0 0.130639 0.989195 0.825341 1.20833e+08 0.00890706 2.62925e+07 2.6719e+07 2.66909e+07 388 2.66394e+07 1.10212e+07 0.00860493 2.657e+07 49.9348 0.08157 0.991538 0 50.376 GTEX-1IKK5-0011-R3b-SM-C1YRY B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 437 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989307 469435 0.9707 0.992291 0.873101 22257 1 76 0.00250241 370 0 9.14736e+07 0.0290813 1.01447e+07 9.21842e+07 4.01477e+06 22266 4.54791e+07 0 0.0975992 0.992291 0.86637 9.14736e+07 0.00321231 2.00034e+07 1.78958e+07 2.0398e+07 367 2.0202e+07 7.60661e+06 0.0028563 2.04104e+07 50.2565 0.110048 0.995275 0 50.4884 GTEX-1IKK5-0011-R5b-SM-CL55B B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 437 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992553 241272 0.964402 0.994188 0.854157 24443 1 76 0.00299888 374 0 1.0165e+08 0.0353678 7.34766e+06 1.02244e+08 1.25967e+07 24466 5.06288e+07 0 0.110245 0.994188 0.849193 1.0165e+08 0.00451222 2.21981e+07 1.41026e+07 2.26719e+07 354 2.24843e+07 9.7707e+06 0.00375431 2.25298e+07 50.0506 0.0718638 0.995823 0 50.5279 GTEX-1IKK5-0011-R6b-SM-A9SLY B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 437 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989575 538080 0.960651 0.991348 0.823866 25074 1 76 0.00700785 271 0 1.06302e+08 0.0391041 7.23239e+06 1.0723e+08 1.88837e+07 25100 5.29121e+07 0 0.136785 0.991348 0.816738 1.06302e+08 0.00840045 2.30352e+07 2.00751e+07 2.35183e+07 297 2.34373e+07 1.07054e+07 0.0077029 2.32605e+07 49.8107 0.0674476 0.993121 0 50.5189 GTEX-1IKK5-0011-R7b-SM-A9G39 B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 437 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98775 352183 0.96069 0.99213 0.825244 24176 1 76 0.00431831 269 0 9.33421e+07 0.0390883 6.44844e+06 9.40825e+07 8.68942e+06 24201 4.63787e+07 0 0.135446 0.99213 0.81875 9.33421e+07 0.00442218 2.0255e+07 2.04591e+07 2.05032e+07 278 2.04732e+07 8.64718e+06 0.00436934 2.06255e+07 50.1853 0.0685402 0.99651 0 50.3044 GTEX-1IKK5-0011-R8b-SM-CJI45 B1, A1 7.4 Brain Brain - Hypothalamus 0001898 437 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992576 1.03782e+06 0.964191 0.993841 0.836376 24834 1 76 0.002229 272 0 9.25124e+07 0.0354041 3.89129e+06 9.30857e+07 4.91923e+06 24858 4.60476e+07 0 0.127815 0.993841 0.831224 9.25124e+07 0.002884 2.02991e+07 1.53575e+07 2.05047e+07 318 2.06273e+07 1.23347e+07 0.00255608 2.0276e+07 49.5706 0.0418033 0.995105 0 50.2519 GTEX-1IKK5-0126-SM-COH3V 1 B1 2 pieces; mild to focally moderate degree of intimal fibroatheromatous plaques; widely patent lumens; minute calcification 6.7 Blood Vessel Artery - Tibial 0007610 648 509 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.9909 281416 0.96901 0.992388 0.754545 22603 1 76 0.00377487 134 0 6.86375e+07 0.030598 397189 6.9164e+07 6.82136e+06 22631 3.41691e+07 0 0.214466 0.992388 0.748802 6.86375e+07 0.00487405 1.50245e+07 1.08615e+07 1.50628e+07 150 1.50552e+07 1.03614e+07 0.00432363 1.51355e+07 50.133 0.00574272 0.993877 0 50.0636 GTEX-1IKK5-0226-SM-CM2TV 1 B1 2 pieces; nerve contains hyalinized small blood vessels; well trimmed; minimal fat; 6.8 Nerve Nerve - Tibial 0001323 649 508 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.990609 668577 0.956432 0.99193 0.72514 25421 1 76 0.00220532 286 0 1.06225e+08 0.0432577 406346 1.0709e+08 6.70047e+06 25477 5.29171e+07 0 0.231292 0.99193 0.719288 1.06225e+08 0.00284178 2.30911e+07 2.06875e+07 2.32212e+07 299 2.32894e+07 1.59646e+07 0.00252312 2.3161e+07 49.8617 0.00379445 0.99325 0 50.1405 GTEX-1IKK5-0326-SM-C1YPY 2 B1 2 pieces; slight to moderate increase of portal lymphocytes, but no necrosis 6.3 Liver Liver 0001114 650 507 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.984813 600386 0.982691 0.987446 0.827474 22001 1 76 0.0021198 164 0 8.20563e+07 0.0169905 969873 8.30996e+07 3.61558e+06 22015 4.07817e+07 0 0.155217 0.987446 0.817085 8.20563e+07 0.00272851 1.81004e+07 9.98549e+06 1.83236e+07 194 1.83726e+07 1.51252e+07 0.00242335 1.82455e+07 49.8266 0.0116712 0.990079 0 50.3064 GTEX-1IKK5-0426-SM-CL53X 1 B1 2 pieces; <5% internal fat; slight atrophy 8.8 Muscle Muscle - Skeletal 0011907 654 503 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.994037 702581 0.982191 0.995344 0.856737 21809 1 76 0.00262617 375 0 1.23941e+08 0.0175347 877911 1.24521e+08 1.57851e+07 21829 6.17456e+07 0 0.125454 0.995344 0.852749 1.23941e+08 0.0035604 2.64258e+07 1.30149e+07 2.67487e+07 343 2.68224e+07 2.59659e+07 0.00309267 2.64908e+07 49.689 0.00705032 0.996652 0 50.3036 GTEX-1IKK5-0526-SM-CMKGG 1 B1 2 pieces; 5% vascular content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 655 502 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.9936 391310 0.972647 0.994755 0.768498 24341 1 76 0.00237401 223 0 9.54095e+07 0.0270398 635436 9.59126e+07 7.27171e+06 24379 4.75343e+07 0 0.204148 0.994755 0.764468 9.54095e+07 0.0030715 2.09056e+07 9.2059e+06 2.10266e+07 224 2.10675e+07 1.60237e+07 0.00272235 2.09703e+07 49.8843 0.00662516 0.995909 0 50.1443 GTEX-1IKK5-0626-SM-ARL8A 0 B1 6 pieces; 1% dermal fat; well trimmed 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 658 499 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.992256 468380 0.968774 0.992446 0.770653 23288 1 76 0.00213724 144 0 6.53551e+07 0.0309919 726563 6.58526e+07 3.89136e+06 23317 3.25117e+07 0 0.19812 0.992446 0.764832 6.53551e+07 0.00268317 1.43351e+07 9.06889e+06 1.44063e+07 152 1.45387e+07 1.00053e+07 0.00241015 1.4215e+07 49.4371 0.0110332 0.992636 0 50.1238 GTEX-1IKK5-0826-SM-ACKWN 1 B1 2 pieces; extraneous and/or foreign material in 1 piece, <10%[outlined] 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 663 494 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992 204696 0.979353 0.993338 0.746053 22657 1 76 0.00328033 206 0 8.86709e+07 0.0203257 741988 8.92656e+07 1.23257e+07 22691 4.41568e+07 0 0.2333 0.993338 0.741082 8.86709e+07 0.0037671 1.96118e+07 1.16298e+07 1.98668e+07 228 1.98702e+07 1.21438e+07 0.00352339 1.97219e+07 49.8127 0.00831214 0.994675 0 50.3229 GTEX-1IKK5-0926-SM-A9G2U 2 B1 6 pieces; occasional sclerosed glomeruli and small lymphoid collections 6.6 Kidney Kidney - Cortex 0001225 664 493 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.989793 157329 0.977048 0.993176 0.797241 24049 1 76 0.00434646 198 0 8.46589e+07 0.0227124 2.94854e+06 8.52405e+07 7.35783e+06 24074 4.21013e+07 0 0.179807 0.993176 0.791801 8.46589e+07 0.0042225 1.88517e+07 1.27606e+07 1.89746e+07 238 1.9074e+07 9.74808e+06 0.0042855 1.90048e+07 49.9092 0.0345908 0.996559 0 50.1625 GTEX-1IKK5-1026-SM-AHZ2V 2 B1 2 pieces; well trimmed, poorly preserved 6.2 Adrenal Gland Adrenal Gland 0002369 667 490 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 EXCLUDE 0.988671 254530 0.974039 0.990098 0.812339 22886 1 76 0.00724992 131 0 7.22392e+07 0.0257576 3.52359e+06 7.29617e+07 1.29548e+07 22904 3.59292e+07 0 0.1617 0.990098 0.804295 7.22392e+07 0.00891784 1.58494e+07 9.13921e+06 1.6173e+07 164 1.61224e+07 7.8274e+06 0.00808268 1.59934e+07 49.7993 0.0482937 0.991525 0 50.5052 GTEX-1IKK5-1126-SM-AHZ2W 2 B1 6 pieces; moderate chronic gastritis with moderate mucosal lymphoid infiltrates 6.6 Stomach Stomach 0000945 672 485 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 EXCLUDE 0.974221 346631 0.974429 0.976029 0.757897 25354 1 76 0.00838267 228 0 1.09596e+08 0.0220175 949375 1.12288e+08 1.81502e+07 25402 5.42162e+07 0 0.216532 0.976029 0.739729 1.09596e+08 0.0106714 2.45281e+07 3.21084e+07 2.47804e+07 227 2.48579e+07 1.54601e+07 0.00952491 2.46439e+07 49.7839 0.00845483 0.977836 0 50.2558 GTEX-1IKK5-1326-SM-AHZ2X 1 B1 6 pieces; small foci of chronic inflammation 8 Esophagus Esophagus - Mucosa 0006920 674 483 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987828 456869 0.974117 0.989355 0.74679 23456 1 76 0.00716993 144 0 8.59805e+07 0.0255373 412381 8.69057e+07 1.59916e+07 23485 4.27683e+07 0 0.227327 0.989355 0.73884 8.59805e+07 0.00856548 1.93563e+07 1.15037e+07 1.94763e+07 154 1.94927e+07 1.36233e+07 0.00786663 1.94669e+07 49.9668 0.00474516 0.990881 0 50.1544 GTEX-1IKK5-1426-SM-CJI3U 1 B1 6 pieces; well dissected 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 677 480 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99194 423634 0.972921 0.993253 0.76144 21892 1 76 0.00242669 122 0 5.9627e+07 0.0268631 613866 6.0032e+07 4.03077e+06 21914 2.96834e+07 0 0.211481 0.993253 0.756303 5.9627e+07 0.0027866 1.29518e+07 5.29872e+06 1.30939e+07 137 1.31347e+07 8.81987e+06 0.0026064 1.29858e+07 49.715 0.0102256 0.994566 0 50.2727 GTEX-1IKK5-1526-SM-CKZPW 1 B1 2 pieces; no inflamed or scarred areas 7 Heart Heart - Left Ventricle 0006566 678 479 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991952 206389 0.979677 0.993696 0.819362 22262 1 76 0.00235626 267 0 9.97145e+07 0.0201147 3.85479e+06 1.00347e+08 8.80265e+06 22280 4.96879e+07 0 0.160315 0.993696 0.814196 9.97145e+07 0.00338155 2.20876e+07 1.18816e+07 2.23756e+07 314 2.24207e+07 1.40861e+07 0.00286801 2.21899e+07 49.7413 0.0384146 0.99544 0 50.3238 GTEX-1IKK5-1726-SM-CM2RU 1 B1 2 pieces; 20% fibrofatty tissue in 1 piece 8.3 Heart Heart - Atrial Appendage 0006631 682 475 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99447 449460 0.980525 0.995668 0.80758 22991 1 76 0.00226698 372 0 1.22032e+08 0.0192 2.81116e+06 1.22563e+08 6.69377e+06 23021 6.08172e+07 0 0.172944 0.995668 0.804082 1.22032e+08 0.00301075 2.609e+07 1.47347e+07 2.62668e+07 334 2.62774e+07 1.96598e+07 0.00263842 2.61908e+07 49.9176 0.0229365 0.996866 0 50.1688 GTEX-1IKK5-1926-SM-A9G2V 1 B1 2 pieces; foci of emphysema; several engorged large blood vessels in 1 piece [10%]; patchy alveolar hemorrhage 7.6 Lung Lung 0008952 688 469 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.98799 204760 0.974158 0.991737 0.753826 23427 1 76 0.00422768 206 0 9.12342e+07 0.0253689 390209 9.19943e+07 8.19662e+06 23471 4.53348e+07 0 0.220332 0.991737 0.747598 9.12342e+07 0.00420062 2.01455e+07 9.08707e+06 2.04291e+07 223 2.05321e+07 1.3639e+07 0.00421438 2.03534e+07 49.7815 0.00424166 0.995485 0 50.3495 GTEX-1IKK5-2426-SM-CE6SV 2 B1 2 pieces; severe reduction in spermatogenesis; occasional hyalinized tubules 5.6 Testis Testis 0000473 694 463 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.987221 433525 0.946857 0.989012 0.725351 30314 1 76 0.00776995 130 0 7.31275e+07 0.0529469 1.73316e+06 7.39399e+07 1.03711e+07 30366 3.6353e+07 0 0.221506 0.989012 0.717381 7.31275e+07 0.00826663 1.58156e+07 9.70125e+06 1.58582e+07 145 1.59462e+07 8.84549e+06 0.00801784 1.58437e+07 49.8388 0.0234401 0.990802 0 50.0672 GTEX-1IKK5-2726-SM-CNPQ6 2 B1 6 pieces; mucosa severely autolyzed, muscularis intact 6.3 Colon Colon - Transverse 0001157 708 449 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984238 208291 0.973212 0.987385 0.799994 24359 1 76 0.00583458 155 0 8.06214e+07 0.0262256 597422 8.16514e+07 2.02408e+07 24383 4.00531e+07 0 0.173218 0.987385 0.789903 8.06214e+07 0.00901334 1.75121e+07 9.49071e+06 1.75909e+07 167 1.76363e+07 1.24632e+07 0.0074189 1.77099e+07 50.1042 0.00731674 0.990533 0 50.1123 GTEX-1IKK5-2826-SM-AHZ2Y 1 B1 1 piece: thin rim of adenohypophysis with large central core of neurohypophysis 7.2 Pituitary Pituitary 0000007 732 425 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988424 417894 0.965198 0.989948 0.748292 26092 1 76 0.00700292 132 0 8.79709e+07 0.0344997 530827 8.88642e+07 1.54218e+07 26129 4.37671e+07 0 0.216905 0.989948 0.74077 8.79709e+07 0.00856364 1.87699e+07 1.09113e+07 1.8844e+07 160 1.88755e+07 1.33331e+07 0.00778208 1.88651e+07 49.9862 0.00597346 0.991471 0 50.0986 GTEX-1IKK5-2926-SM-ARU7Q 1 B1 2 pieces; meninges comprise 40% of smaller piece; 6.9 Brain Brain - Cortex 0001870 734 423 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993463 397001 0.967753 0.99476 0.820424 24337 1 76 0.00233438 269 0 8.11263e+07 0.0318262 2.57392e+06 8.15537e+07 2.82607e+06 24356 4.04121e+07 0 0.147329 0.99476 0.816125 8.11263e+07 0.00310457 1.78952e+07 8.69473e+06 1.79923e+07 257 1.801e+07 1.04683e+07 0.00271897 1.79624e+07 49.9338 0.0315611 0.996056 0 50.1353 GTEX-1IKOE-0001-SM-G8OXL B1 Blood Whole Blood 0013756 -57 BP-59482 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IKOE-0005-SM-CMKFL B1 8.6 Blood Whole Blood 0013756 -57 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.992007 3.04161e+06 0.915608 0.993315 0.74989 19966 1 76 0.00199778 193 0 1.14247e+08 0.0841038 467175 1.15016e+08 7.41650e+06 19981 5.69191e+07 0 0.165717 0.993315 0.744877 1.14247e+08 0.00347322 2.4257e+07 1.23982e+08 2.44292e+07 210 2.44524e+07 2.36247e+07 0.00273453 2.45037e+07 50.0524 0.00406184 0.994623 0 50.1768 GTEX-1IKOE-0526-SM-CE6T3 1 B1 2 pieces; well trimmed 7.9 Blood Vessel Artery - Tibial 0007610 473 736 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.989551 478496 0.975582 0.991584 0.854565 20874 1 76 0.00597077 171 0 8.53414e+07 0.0240212 497180 8.60657e+07 1.39118e+07 20886 4.24341e+07 0 0.121016 0.991584 0.847373 8.53414e+07 0.00665172 1.83461e+07 6.8252e+06 1.83987e+07 179 1.84457e+07 1.66972e+07 0.00631055 1.84671e+07 50.0291 0.00577675 0.993618 0 50.0716 GTEX-1IKOE-0626-SM-A9G31 0 B1 2 pieces 9 Heart Heart - Atrial Appendage 0006631 485 724 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986981 247913 0.978114 0.992189 0.839856 22535 1 76 0.00410631 268 0 1.04515e+08 0.0215716 2.02962e+06 1.05338e+08 9.24926e+06 22559 5.18995e+07 0 0.138258 0.992189 0.833296 1.04515e+08 0.00423909 2.25481e+07 1.87628e+07 2.27056e+07 270 2.27808e+07 1.69222e+07 0.00417148 2.29131e+07 50.1447 0.0192677 0.997396 0 50.174 GTEX-1IKOE-0726-SM-CE6T4 1 B1 6 pieces; focal mild atherosis 6.6 Blood Vessel Artery - Aorta 0001496 490 719 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987526 574267 0.974072 0.989082 0.806458 22054 1 76 0.00812956 143 0 8.03549e+07 0.0255703 352910 8.12419e+07 1.34151e+07 22075 3.99406e+07 0 0.167614 0.989082 0.797653 8.03549e+07 0.00812224 1.754e+07 8.18719e+06 1.75899e+07 152 1.76648e+07 1.45729e+07 0.0081259 1.75869e+07 49.8895 0.00434394 0.990638 0 50.0711 GTEX-1IKOE-0826-SM-ARZME 1 B1 2 pieces; no lesions, ~80% is attached fat/nerve 7.5 Blood Vessel Artery - Coronary 0001621 507 702 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989611 512667 0.969198 0.99158 0.808621 22350 1 76 0.00264499 132 0 6.46005e+07 0.0305369 460445 6.5149e+07 2.84422e+06 22366 3.20938e+07 0 0.160577 0.99158 0.801812 6.46005e+07 0.00367256 1.39362e+07 8.40757e+06 1.41839e+07 149 1.42399e+07 1.07549e+07 0.00315776 1.39931e+07 49.5629 0.00706757 0.99355 0 50.4403 GTEX-1IKOE-0926-SM-ARU7X 1 B1 2 pieces 6.9 Thyroid Thyroid 0002046 510 699 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991518 351443 0.965387 0.992821 0.732379 24256 1 76 0.00225663 162 0 8.47821e+07 0.0343058 341884 8.53951e+07 2.8077e+06 24303 4.22382e+07 0 0.233008 0.992821 0.727121 8.47821e+07 0.00313299 1.85226e+07 7.7555e+06 1.85917e+07 186 1.86421e+07 1.30520e+07 0.00269424 1.85697e+07 49.9028 0.00400356 0.994125 0 50.0931 GTEX-1IKOE-1026-SM-ARZMF 1 B1 2 pieces; focal hypereosinophilia of fibers and ?degeneration (?early ischemia) 8.4 Heart Heart - Left Ventricle 0006566 498 711 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.98939 856888 0.980887 0.991791 0.839559 20522 1 76 0.00287611 199 0 8.50858e+07 0.0188803 2.75557e+06 8.57901e+07 3.02102e+06 20532 4.22564e+07 0 0.141328 0.991791 0.832667 8.50858e+07 0.00402781 1.85536e+07 2.03893e+07 1.86981e+07 222 1.89192e+07 1.4133e+07 0.00345057 1.84865e+07 49.4216 0.0321199 0.994191 0 50.194 GTEX-1IKOE-1226-SM-A8N98 1 B1 2 pieces; include pleura (target is 1 cm below pleura), atelectasis, numerous pigmented macrophages 8.7 Lung Lung 0008952 502 707 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.986193 397721 0.973914 0.988497 0.792766 26003 1 76 0.0109851 209 0 1.07786e+08 0.0257228 649755 1.0904e+08 1.94948e+07 26043 5.35702e+07 0 0.181148 0.988497 0.783647 1.07786e+08 0.011042 2.38349e+07 1.21913e+07 2.40934e+07 241 2.41449e+07 1.85469e+07 0.0110135 2.40311e+07 49.8819 0.00595885 0.9908 0 50.2697 GTEX-1IKOE-1326-SM-CE6T6 0 B1 2 pieces; dense fibrocollagenous tissue with smaller component of fat 6.2 Breast Breast - Mammary Tissue 0008367 509 700 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988763 209884 0.976676 0.989931 0.828658 23674 1 76 0.00800438 141 0 7.14832e+07 0.0225689 272471 7.22103e+07 1.13537e+07 23696 3.55518e+07 0 0.148018 0.989931 0.820314 7.14832e+07 0.007736 1.57495e+07 7.73696e+06 1.58395e+07 138 1.58582e+07 1.4587e+07 0.00787035 1.58168e+07 49.9346 0.0037733 0.991098 0 50.1424 GTEX-1IKOE-1426-SM-CE6T7 1 B1 6 pieces; well trimmed 8.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 506 703 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.986935 534316 0.978303 0.988801 0.84257 23128 1 76 0.00790627 199 0 9.70475e+07 0.0214301 683329 9.81467e+07 1.53261e+07 23150 4.82484e+07 0 0.135733 0.988801 0.833134 9.70475e+07 0.00861807 2.13802e+07 1.25188e+07 2.15507e+07 202 2.15938e+07 1.71213e+07 0.0082615 2.15171e+07 49.9111 0.00696233 0.990666 0 50.1986 GTEX-1IKOE-1526-SM-C1YSD 0 B1 6 pieces; numerous submucosal glands 9.7 Esophagus Esophagus - Mucosa 0006920 538 671 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987807 809537 0.975413 0.990405 0.834878 22650 1 76 0.00202659 218 0 9.84898e+07 0.0241637 546280 9.9444e+07 4.51328e+06 22668 4.89891e+07 0 0.140535 0.990405 0.826868 9.84898e+07 0.00253703 2.20362e+07 1.41607e+07 2.21926e+07 238 2.22707e+07 2.11947e+07 0.00228114 2.21932e+07 49.9128 0.00549335 0.993003 0 50.1768 GTEX-1IKOE-1626-SM-C1YSE 0 B1 6 pieces; target muscularis 8.4 Esophagus Esophagus - Muscularis 0004648 547 662 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990922 571261 0.975635 0.993332 0.823308 22232 1 76 0.00201633 219 0 8.89867e+07 0.0240709 839952 8.9584e+07 4.16093e+06 22249 4.42709e+07 0 0.152327 0.993332 0.817818 8.89867e+07 0.00253103 1.92855e+07 7.07328e+06 1.94693e+07 235 1.94671e+07 1.50666e+07 0.00227305 1.94805e+07 50.0171 0.00937614 0.995743 0 50.2371 GTEX-1IKOE-1726-SM-CNNQ6 0 B1 2 pieces; lobulated fat, 1 piece includes a few larger vessels 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 518 691 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992144 429519 0.980081 0.993971 0.818689 24194 1 76 0.00248978 279 0 1.25125e+08 0.0196024 748226 1.25884e+08 1.27042e+07 24227 6.23299e+07 0 0.161392 0.993971 0.813752 1.25125e+08 0.00353728 2.77037e+07 1.29911e+07 2.79609e+07 330 2.79656e+07 2.1963e+07 0.00301257 2.79059e+07 49.9466 0.00594376 0.995797 0 50.231 GTEX-1IKOE-1926-SM-ARU7V 1 B1 6 pieces; fragments of mucosa, submucosa, lymphoid aggregates (well represented), and rare portion of muscularis (not target) 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 521 688 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992021 339464 0.963558 0.993232 0.729112 24601 1 76 0.0024947 139 0 7.44355e+07 0.0356609 158354 7.49427e+07 2.51243e+06 24644 3.70611e+07 0 0.234447 0.993232 0.724177 7.44355e+07 0.00323262 1.63795e+07 7.86965e+06 1.64464e+07 149 1.64956e+07 1.25265e+07 0.00286321 1.64128e+07 49.8742 0.002113 0.994443 0 50.1018 GTEX-1IKOE-2026-SM-AHZ31 1 B1 6 pieces; mucosa only, some superficial hemorrhage 8.2 Colon Colon - Transverse 0001157 539 670 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988082 449757 0.974119 0.989549 0.81738 24903 1 76 0.00721416 300 0 1.27314e+08 0.0253797 1.07392e+06 1.28658e+08 2.27371e+07 24944 6.33583e+07 0 0.156739 0.989549 0.808838 1.27314e+08 0.00878112 2.8337e+07 1.99287e+07 2.85192e+07 303 2.85121e+07 2.23342e+07 0.00799647 2.85095e+07 49.9977 0.0083471 0.991017 0 50.1602 GTEX-1IKOE-2126-SM-A96T5 1 B1 6 pieces; target muscularis 8.2 Colon Colon - Sigmoid 0001159 555 654 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993552 235351 0.974999 0.994788 0.820743 22424 1 76 0.00207264 170 0 7.57511e+07 0.0246912 526050 7.6148e+07 2.40302e+06 22442 3.77575e+07 0 0.154256 0.994788 0.816465 7.57511e+07 0.00245464 1.65191e+07 6.34614e+06 1.66524e+07 199 1.66199e+07 1.29258e+07 0.0022634 1.66378e+07 50.0269 0.00690825 0.996023 0 50.201 GTEX-1IKOE-2226-SM-ACKWV 1 B1 6 pieces; target muscularis 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 526 683 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992857 193051 0.976032 0.994259 0.82592 22473 1 76 0.00326391 279 0 9.23482e+07 0.0237282 2.45845e+06 9.28815e+07 1.19562e+07 22496 4.60035e+07 0 0.150111 0.994259 0.821179 9.23482e+07 0.00419272 2.00828e+07 1.23869e+07 2.03061e+07 283 2.02398e+07 1.17651e+07 0.00372766 2.02603e+07 50.0253 0.0264687 0.995661 0 50.2765 GTEX-1IKOE-2326-SM-A8N99 1 B1 2 pieces; ~80% of 1 piece is vessels 7.6 Ovary Ovary 0000992 554 655 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.989041 298037 0.967837 0.99086 0.742877 25369 1 76 0.00790482 174 0 9.46245e+07 0.0319053 270048 9.54973e+07 1.25573e+07 25410 4.7071e+07 0 0.22496 0.99086 0.736087 9.46245e+07 0.00796352 2.07093e+07 1.00901e+07 2.09065e+07 188 2.09215e+07 1.51459e+07 0.00793411 2.08658e+07 49.9334 0.00282781 0.992678 0 50.2369 GTEX-1IKOE-2426-SM-ARU7W 1 B1 2 pieces; myometrium 8 Uterus Uterus 0000995 548 661 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992122 364702 0.971657 0.993217 0.767352 22462 1 76 0.00221868 145 0 7.32126e+07 0.02801 184431 7.37126e+07 2.53162e+06 22489 3.64751e+07 0 0.204305 0.993217 0.762148 7.32126e+07 0.00274484 1.59707e+07 5.58003e+06 1.60599e+07 158 1.60632e+07 1.25547e+07 0.00248147 1.60412e+07 49.9657 0.00250203 0.994312 0 50.1393 GTEX-1IKOE-5004-SM-AN48B B1 Muscle Muscle - Skeletal 0011907 471 ChIP-Seq GTEX-1IKOE-5007-SM-AN48A B1 Heart Heart - Left Ventricle 0006566 499 ChIP-Seq GTEX-1IKOE-5010-SM-AN489 B1 Lung Lung 0008952 504 ChIP-Seq GTEX-1IKOH-0001-SM-EAZDF B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1053 BP-63049 RNA isolation_Trizol Manual (Cell Pellet) 05/01/2015 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99145 826661 0.965498 0.992626 0.79554 21514 1 76 0.00203113 210 0 9.6426e+07 0.0340145 529507 9.71423e+07 7.52158e+06 21549 4.80336e+07 0 0.169958 0.992626 0.789673 9.6426e+07 0.00315457 2.13342e+07 1.28437e+07 2.14339e+07 206 2.14503e+07 2.21267e+07 0.00259219 2.14283e+07 49.9744 0.00545084 0.993802 0 50.1166 GTEX-1IKOH-0003-SM-G8OXK B1 Blood Whole Blood 0013756 1053 BP-59640 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/15/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IKOH-0006-SM-CMKFM B1 7.1 Blood Whole Blood 0013756 1053 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.971135 895689 0.962706 0.972183 0.776857 17632 1 76 0.00142201 106 0 1.04296e+08 0.036078 349002 1.0728e+08 7.39432e+06 17634 5.18867e+07 0 0.185848 0.972183 0.755248 1.04296e+08 0.00263435 2.4455e+07 1.85266e+08 2.44879e+07 150 2.45477e+07 2.80459e+07 0.00202753 2.45442e+07 49.9965 0.00325318 0.973232 0 50.0336 GTEX-1IKOH-0011-R11a-SM-AHZ38 B1, A1 6.5 Brain Brain - Cerebellar Hemisphere 0002037 1083 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.986339 448934 0.945712 0.988488 0.745506 23506 1 76 0.00689199 148 0 7.79123e+07 0.05403 2.64997e+06 7.88197e+07 1.41971e+07 23532 3.87066e+07 0 0.200207 0.988488 0.736923 7.79123e+07 0.00922366 1.66775e+07 1.37391e+07 1.69136e+07 175 1.68789e+07 6.67561e+06 0.00805529 1.68541e+07 49.9632 0.0336207 0.990636 0 50.3514 GTEX-1IKOH-0011-R2a-SM-CMKHO B1, A1 5.7 Brain Brain - Substantia nigra 0002038 1083 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.992891 218458 0.951072 0.994086 0.843997 21124 1 76 0.0024071 162 0 6.20624e+07 0.0487477 9.49418e+06 6.24316e+07 4.55633e+06 21140 3.09267e+07 0 0.107075 0.994086 0.839006 6.20624e+07 0.00342777 1.34314e+07 1.0392e+07 1.40736e+07 197 1.37811e+07 5.32992e+06 0.00291682 1.37829e+07 50.0032 0.152073 0.995282 0 51.1675 GTEX-1IKOH-0011-R5a-SM-ARU8C B1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 1083 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135,LCSET-8682 02/23/2016 TruSeq.v1 RNASEQ 0.992321 1.00215e+06 0.961768 0.993714 0.81602 25550 1 76 0.00208641 373 0 1.55914e+08 0.0380112 1.23713e+07 1.569e+08 7.81751e+06 25587 7.7704e+07 0 0.145749 0.993714 0.81089 1.55914e+08 0.0029633 3.36154e+07 5.69669e+07 3.42026e+07 374 3.38957e+07 1.28561e+07 0.00252424 3.41058e+07 50.1545 0.0788485 0.995106 0 50.433 GTEX-1IKOH-0011-R6b-SM-A9G1W B1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1083 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985215 787579 0.954617 0.99095 0.822057 22392 1 76 0.0040638 267 0 9.77207e+07 0.0452555 1.16706e+07 9.86131e+07 9.20404e+06 22404 4.85071e+07 0 0.132561 0.99095 0.814617 9.77207e+07 0.00401925 2.07927e+07 5.29892e+07 2.13279e+07 315 2.11835e+07 5.54473e+06 0.00404194 2.13707e+07 50.2199 0.118347 0.996685 0 50.6353 GTEX-1IKOH-0011-R7b-SM-CKZPH B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 1083 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990835 579864 0.969454 0.993377 0.852105 19931 1 76 0.00230187 366 0 9.57771e+07 0.0304885 1.39738e+07 9.64157e+07 9.16369e+06 19942 4.76987e+07 0 0.117349 0.993377 0.846461 9.57771e+07 0.00392631 2.03773e+07 4.45779e+07 2.15835e+07 355 2.11738e+07 3.58899e+06 0.00311201 2.09401e+07 49.7225 0.144933 0.995919 0 51.4373 GTEX-1IKOH-0011-R8a-SM-A9SKG B1, A1 6.5 Brain Brain - Hypothalamus 0001898 1083 BP-65192 RNA isolation_PAXgene Tissue miRNA 07/09/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.98995 541017 0.960972 0.991798 0.827351 23928 1 76 0.00652974 197 0 8.14627e+07 0.0388215 6.68281e+06 8.21364e+07 1.39129e+07 23948 4.05553e+07 0 0.133621 0.991798 0.820566 8.14627e+07 0.00833972 1.76354e+07 2.66444e+07 1.81635e+07 225 1.80265e+07 6.24509e+06 0.00743304 1.78787e+07 49.7941 0.0813624 0.993646 0 50.7377 GTEX-1IKOH-0126-SM-COH4D 0 B1 2 pieces, ~5-10% interstitial fat; focal tendon insertion, encircled; focie of scarring ensquared 8.3 Muscle Muscle - Skeletal 0011907 1287 916 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993637 375345 0.980282 0.994728 0.856967 21969 1 76 0.00332966 274 0 1.17021e+08 0.0194688 885910 1.17641e+08 1.21436e+07 21993 5.83459e+07 0 0.123314 0.994728 0.852449 1.17021e+08 0.0039783 2.53015e+07 1.17179e+07 2.55226e+07 313 2.55493e+07 2.52876e+07 0.00365362 2.5391e+07 49.8446 0.00753061 0.995819 0 50.2175 GTEX-1IKOH-0226-SM-COH4E 0 B1 6 pieces, minimal dermal fat; squamous epithelium is %0-60 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1287 916 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991502 324347 0.96916 0.992847 0.74786 24756 1 76 0.00361516 186 0 8.86873e+07 0.0305796 286944 8.93263e+07 9.28576e+06 24799 4.41756e+07 0 0.221301 0.992847 0.74251 8.86873e+07 0.00444434 1.92922e+07 9.82054e+06 1.93875e+07 192 1.94171e+07 1.40751e+07 0.00402919 1.93785e+07 49.9502 0.00321231 0.994192 0 50.1231 GTEX-1IKOH-0626-SM-CJI35 1 B1 2 pieces, no abnormalities 6.3 Thyroid Thyroid 0002046 1306 897 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993162 575752 0.975721 0.994062 0.772123 24418 1 76 0.00228157 175 0 8.60469e+07 0.0236156 456741 8.65609e+07 5.726e+06 24449 4.28363e+07 0 0.203598 0.994062 0.767538 8.60469e+07 0.00261668 1.92153e+07 1.37889e+07 1.92592e+07 196 1.93962e+07 1.50187e+07 0.00244897 1.91576e+07 49.6906 0.00527653 0.994963 0 50.057 GTEX-1IKOH-0926-SM-A9SLU 1 B1 2 pieces, no abnormalities 6.4 Heart Heart - Atrial Appendage 0006631 1313 890 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847,LCSET-8172 11/17/2015 TruSeq.v1 RNASEQ 0.990663 260142 0.982669 0.992625 0.790093 23320 1 76 0.00471435 198 0 9.29951e+07 0.0171075 5.26418e+06 9.3686e+07 1.37085e+07 23345 4.62931e+07 0 0.192576 0.992625 0.784266 9.29951e+07 0.00615322 2.06963e+07 1.53562e+07 2.0863e+07 252 2.0873e+07 1.08205e+07 0.00543236 2.08458e+07 49.9674 0.0561895 0.994587 0 50.2005 GTEX-1IKOH-1626-SM-A9SLT 1 B1 6 pieces, confirmed target muscularis; adherent serosa/fat up to ~0.6mm 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1331 872 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989427 141407 0.969776 0.990921 0.82371 22311 1 76 0.0066879 139 0 6.91193e+07 0.0300841 3.24514e+06 6.97527e+07 1.22836e+07 22327 3.4415e+07 0 0.146066 0.990921 0.816232 6.91193e+07 0.00826326 1.51158e+07 8.80311e+06 1.54431e+07 165 1.54064e+07 6.53814e+06 0.00747439 1.52441e+07 49.7352 0.0465236 0.992414 0 50.5355 GTEX-1IKOH-2326-SM-CM2TW 1 B1 2 pieces, mainly fibroadipose elements; trace atrphic duct/lobular units, rep delineated. 5.8 Breast Breast - Mammary Tissue 0008367 1344 859 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992526 252890 0.971231 0.993753 0.704288 25313 1 76 0.00220331 164 0 8.51361e+07 0.0284553 380391 8.56713e+07 5.41991e+06 25370 4.23929e+07 0 0.266943 0.993753 0.699888 8.51361e+07 0.00285322 1.88404e+07 7.74971e+06 1.8891e+07 184 1.89305e+07 1.22357e+07 0.00252786 1.89017e+07 49.9621 0.00444012 0.99498 0 50.067 GTEX-1IKOH-2826-SM-CNNRC 1 B1 4 pieces, cerebellum, no abnormalities; switch with -2725 6.2 Brain Brain - Cerebellum 0002037 1409 794 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990103 631773 0.952586 0.992406 0.752996 25057 1 76 0.00264883 271 0 1.30998e+08 0.0471088 3.86973e+06 1.32e+08 1.45783e+07 25110 6.51846e+07 0 0.199591 0.992406 0.747277 1.30998e+08 0.00376383 2.83742e+07 2.16747e+07 2.86318e+07 322 2.87319e+07 1.29508e+07 0.00320504 2.85349e+07 49.828 0.029316 0.994708 0 50.2259 GTEX-1IKOH-2926-SM-A96TF 1 B1 1 piece; mainly adenophypophysis; ~4.5mm foculs of neurohypophysis delineated; ~7mm nubbin of adherent dura ensquared 6.6 Pituitary Pituitary 0000007 1411 792 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991396 201495 0.963261 0.992829 0.748565 25245 1 76 0.00202083 161 0 7.36665e+07 0.0365002 391057 7.41987e+07 2.31357e+06 25284 3.67056e+07 0 0.214696 0.992829 0.743197 7.36665e+07 0.00259092 1.54278e+07 7.54884e+06 1.55611e+07 173 1.55623e+07 1.09291e+07 0.00230546 1.5522e+07 49.9352 0.0052704 0.994261 0 50.2151 GTEX-1IL2U-0004-SM-G8OXE C1 Blood Whole Blood 0013756 378 BP-59640 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/15/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IL2U-0006-SM-CMKFP C1 8.9 Blood Whole Blood 0013756 378 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.988332 3.63576e+06 0.908836 0.989409 0.698921 20781 1 76 0.00233396 148 0 1.17623e+08 0.0905132 183983 1.18882e+08 8.16633e+06 20808 5.85923e+07 0 0.209915 0.989409 0.691519 1.17623e+08 0.0033674 2.52894e+07 1.92165e+08 2.54614e+07 175 2.55119e+07 2.47574e+07 0.00285012 2.54773e+07 49.9661 0.00154761 0.990486 0 50.1695 GTEX-1IL2U-0011-R11a-SM-CE6SO C1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 397 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988143 588037 0.952788 0.989885 0.771968 23661 1 76 0.00807687 135 0 7.67396e+07 0.0468593 2.05314e+06 7.75238e+07 1.23319e+07 23691 3.81483e+07 0 0.180821 0.989885 0.764159 7.67396e+07 0.00781819 1.662e+07 1.19249e+07 1.67897e+07 161 1.68777e+07 8.96043e+06 0.00794776 1.66532e+07 49.6653 0.026484 0.991627 0 50.254 GTEX-1IL2U-0011-R2a-SM-ARU6V C1, A1 5.7 Brain Brain - Substantia nigra 0002038 397 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992974 222194 0.977135 0.994444 0.853964 21073 1 76 0.00255484 199 0 6.85011e+07 0.022711 7.30936e+06 6.88838e+07 2.17769e+06 21086 3.41322e+07 0 0.123171 0.994444 0.84922 6.85011e+07 0.00339542 1.4852e+07 1.61532e+07 1.5615e+07 242 1.51724e+07 5.17144e+06 0.00297451 1.53463e+07 50.2848 0.106111 0.995915 0 51.2522 GTEX-1IL2U-0011-R5a-SM-CE6SN C1, A1 6.4 Brain Brain - Caudate (basal ganglia) 0001873 397 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988409 403220 0.97247 0.990536 0.846106 21192 1 76 0.00834424 264 0 8.53587e+07 0.0274442 1.06492e+07 8.61743e+07 1.31666e+07 21203 4.24537e+07 0 0.126364 0.990536 0.838098 8.53587e+07 0.00875644 1.834e+07 3.2266e+07 1.8928e+07 273 1.87587e+07 3.80026e+06 0.0085499 1.86106e+07 49.8018 0.123578 0.992662 0 50.7889 GTEX-1IL2U-0011-R6a-SM-ARZLG C1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 397 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.983496 1.24429e+06 0.950599 0.986459 0.774587 23076 1 76 0.00295198 192 0 7.46851e+07 0.0491724 6.19953e+06 7.57103e+07 2.8668e+06 23094 3.69895e+07 0 0.176012 0.986459 0.764098 7.46851e+07 0.00422903 1.56901e+07 4.26219e+07 1.60593e+07 208 1.62385e+07 6.72525e+06 0.00358859 1.56771e+07 49.1205 0.0818849 0.989421 0 50.5814 GTEX-1IL2U-0126-SM-CNPQ5 1 C1 2 pieces; interstitial fibrosis with scarring; significantly decreased spermatogenesis; thick walled vessels; congestion 6.5 Testis Testis 0000473 489 986 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984447 436754 0.929814 0.987209 0.713153 35604 1 76 0.00613531 286 0 1.40743e+08 0.0698809 1.86118e+06 1.42567e+08 3.87445e+07 35702 6.99821e+07 0 0.21666 0.987209 0.704031 1.40743e+08 0.00811388 2.91505e+07 2.39422e+07 2.94881e+07 300 2.96534e+07 2.06442e+07 0.00712183 2.93261e+07 49.7225 0.0130548 0.989971 0 50.2878 GTEX-1IL2U-0226-SM-CE6T8 1 C1 6 pieces; ~5% internal (periadnexal) fat; epidermis ~ 34um 8 Skin Skin - Sun Exposed (Lower leg) 0004264 494 981 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.98774 395672 0.971422 0.990215 0.803588 24088 1 76 0.0055073 209 0 9.35714e+07 0.0282322 365563 9.44961e+07 1.54258e+07 24117 4.65037e+07 0 0.167834 0.990215 0.795724 9.35714e+07 0.00689553 2.02923e+07 1.03102e+07 2.03114e+07 197 2.04738e+07 1.61761e+07 0.00619968 2.03498e+07 49.8481 0.00386855 0.99269 0 50.0235 GTEX-1IL2U-0326-SM-CE6T9 1 C1 2 pieces; mature adipose tissue ~50% with fibrovascular component ~50% 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 495 980 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988639 393427 0.973169 0.989934 0.790219 24915 1 76 0.00801736 186 0 9.70416e+07 0.0265238 438619 9.80284e+07 1.62347e+07 24954 4.82694e+07 0 0.18295 0.989934 0.782265 9.70416e+07 0.0077143 2.13577e+07 8.96532e+06 2.14469e+07 190 2.15144e+07 1.67542e+07 0.00786603 2.14161e+07 49.8855 0.00447441 0.991229 0 50.1042 GTEX-1IL2U-0626-SM-CE6TA 1 C1 2 pieces; circumferential flat atherosclerotic plaque with insignificant luminal compromise; lumen open; >0.5 mm attached adventitia 6.9 Blood Vessel Artery - Tibial 0007610 507 970 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106,LCSET-9327 06/16/2016 TruSeq.v1 RNASEQ 0.989872 386273 0.972043 0.992518 0.78829 22478 1 76 0.00256011 193 0 8.87668e+07 0.0276018 532493 8.94359e+07 8.8747e+06 22510 4.41228e+07 0 0.183754 0.992518 0.782392 8.87668e+07 0.00426575 1.91125e+07 6.48115e+06 1.9123e+07 203 1.92366e+07 1.53132e+07 0.00341065 1.92188e+07 49.9769 0.0059539 0.995163 0 50.0138 GTEX-1IL2U-0726-SM-EAZ2Y 1 C1 2 pieces; one piece contains ~10% internal fat (outlined) 7.5 Muscle Muscle - Skeletal 0011907 510 967 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993296 710547 0.973459 0.994077 0.843182 22524 1 76 0.00189247 274 0 1.17682e+08 0.026272 1.18447e+06 1.18383e+08 8.71263e+06 22548 5.8676e+07 0 0.130277 0.994077 0.838188 1.17682e+08 0.00285573 2.49081e+07 1.65107e+07 2.51775e+07 319 2.51111e+07 2.53768e+07 0.00237372 2.50563e+07 49.9454 0.0100053 0.994858 0 50.2689 GTEX-1IL2U-0826-SM-CL53Q 1 C1 2 pieces of thyroid tissue; interstitial fibrosis 5.7 Thyroid Thyroid 0002046 550 927 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990975 632972 0.962608 0.992611 0.603301 27144 1 76 0.00307178 273 0 1.30032e+08 0.0371096 600982 1.31e+08 1.6403e+07 27239 6.47063e+07 0 0.359307 0.992611 0.598844 1.30032e+08 0.00414212 2.84989e+07 1.33521e+07 2.85839e+07 276 2.86895e+07 1.44329e+07 0.00360607 2.85927e+07 49.9155 0.00458766 0.994248 0 50.0744 GTEX-1IL2U-0926-SM-CKZOB 1 C1 2 pieces of pulmonary tissue; mild to moderate autolysis; one section contains bronchus with cartilage (outlined) and a few bronchioles; congestion 6.2 Lung Lung 0008952 548 930 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990385 346061 0.973304 0.992702 0.722048 24511 1 76 0.00256683 161 0 8.77784e+07 0.0262599 507462 8.84237e+07 8.50483e+06 24558 4.36678e+07 0 0.251256 0.992702 0.716779 8.77784e+07 0.00405997 1.93736e+07 7.85235e+06 1.94908e+07 187 1.95718e+07 1.26924e+07 0.00331166 1.94801e+07 49.8827 0.00573898 0.99502 0 50.1507 GTEX-1IL2U-1026-SM-COH3P 1 C1 6 pieces; mild to moderate autolysis; marked atherosclerosis with slerotic, ulcerated plaque and superficial dissection (outlined) and fresh thrombosis (arrows); up to 0.7mm attached adventitia 7.2 Blood Vessel Artery - Aorta 0001496 551 927 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991632 287042 0.97326 0.992915 0.749896 23802 1 76 0.00385498 202 0 9.36047e+07 0.0263601 258788 9.42727e+07 9.83466e+06 23838 4.66038e+07 0 0.223364 0.992915 0.744583 9.36047e+07 0.00435089 2.03534e+07 7.94812e+06 2.04406e+07 203 2.0448e+07 1.51848e+07 0.00410261 2.04643e+07 50.02 0.0027451 0.994197 0 50.1069 GTEX-1IL2U-1126-SM-COH3Q 1 C1 2 pieces; mild to moderated autolysis; eccentric atherosclerotic plaque (arrows) and large calcification (outlined) with 50% luminal compromise 6.3 Blood Vessel Artery - Coronary 0001621 558 921 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.990792 219008 0.972247 0.992221 0.748927 23606 1 76 0.00383962 138 0 7.75492e+07 0.0274503 348530 7.81571e+07 8.12115e+06 23641 3.8609e+07 0 0.22332 0.992221 0.743101 7.75492e+07 0.00475286 1.69472e+07 7.07188e+06 1.69972e+07 161 1.6994e+07 1.20817e+07 0.00429558 1.70607e+07 50.0978 0.00445935 0.99365 0 50.0736 GTEX-1IL2U-1226-SM-CL53P 1 C1 2 pieces 7.5 Heart Heart - Atrial Appendage 0006631 559 920 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993091 693078 0.979027 0.994716 0.802494 24520 1 76 0.00278473 375 0 1.45404e+08 0.0205944 3.66809e+06 1.46176e+08 1.84563e+07 24560 7.24069e+07 0 0.176534 0.994716 0.798254 1.45404e+08 0.00387282 3.06244e+07 1.80966e+07 3.12147e+07 350 3.11134e+07 2.42279e+07 0.00332789 3.09152e+07 49.8402 0.0250936 0.996342 0 50.4773 GTEX-1IL2U-1326-SM-A9G2O 1 C1 2 pieces; interstitial fibrosis with focal scarring (outlined); ? focal edema of fibers and eosinophilia (arrows) suggestive of early infarction 6.3 Heart Heart - Left Ventricle 0006566 560 920 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986158 158044 0.982635 0.991487 0.830635 20680 1 76 0.00440041 189 0 7.84082e+07 0.0172646 4.06737e+06 7.90814e+07 7.24048e+06 20693 3.89344e+07 0 0.152 0.991487 0.823564 7.84082e+07 0.00470267 1.71979e+07 2.17697e+07 1.73992e+07 249 1.7404e+07 6.47165e+06 0.00454876 1.74949e+07 50.1302 0.0514327 0.996817 0 50.2909 GTEX-1IL2U-1426-SM-A8N8U 1 C1 6 pieces; well preserved stratified squamous epithelium ~0.4um thick and muscularis mucosae 8.5 Esophagus Esophagus - Mucosa 0006920 561 919 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984299 405350 0.973121 0.98707 0.706914 24903 1 76 0.0109562 159 0 9.9406e+07 0.0265912 367894 1.00708e+08 1.81469e+07 24941 4.93747e+07 0 0.266207 0.98707 0.697774 9.9406e+07 0.011595 2.22821e+07 1.41465e+07 2.24363e+07 166 2.25685e+07 1.51286e+07 0.0112747 2.24339e+07 49.8505 0.00365307 0.989841 0 50.1725 GTEX-1IL2U-2326-SM-CNNQV 2 C1 2 pieces; interstitial fibrosis with microlobulation; rare Langerhans islets (rep outlined); thick walled vessels (arrows) 6.8 Pancreas Pancreas 0001150 576 908 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99209 250271 0.979594 0.994017 0.836776 23213 1 76 0.00287787 196 0 1.28043e+08 0.0200121 290634 1.28813e+08 1.46206e+07 23242 6.37582e+07 0 0.142817 0.994017 0.83177 1.28043e+08 0.00381524 2.95011e+07 4.15085e+07 2.99119e+07 226 2.98145e+07 4.11757e+07 0.00334565 2.98346e+07 50.0168 0.00225624 0.995944 0 50.3457 GTEX-1IL2U-2526-SM-C1YQV 1 C1 6 pieces; target muscularis with partial rim of submucosa/serosa 6.3 Colon Colon - Sigmoid 0001159 587 898 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98068 341884 0.971652 0.983204 0.767563 23985 1 76 0.00226528 204 0 8.65784e+07 0.0280982 987766 8.80575e+07 4.30428e+06 24020 4.30293e+07 0 0.204089 0.983204 0.754671 8.65784e+07 0.00278968 1.88088e+07 7.37655e+06 1.92113e+07 217 1.92156e+07 1.24245e+07 0.00252681 1.9002e+07 49.7205 0.0112173 0.985727 0 50.5294 GTEX-1IL2U-2726-SM-C1YSG 1 C1 2 pieces; lobulated mature adipose tissue; one piece contains larger vessel (arrow) 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 590 896 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.986915 150630 0.979428 0.98947 0.8657 22258 1 76 0.00253332 170 0 7.54462e+07 0.0202192 1.24293e+06 7.6249e+07 6.65343e+06 22270 3.75275e+07 0 0.113728 0.98947 0.856585 7.54462e+07 0.00379575 1.6637e+07 8.01123e+06 1.68747e+07 194 1.68592e+07 1.38031e+07 0.00316291 1.68324e+07 49.9603 0.0163009 0.992026 0 50.3547 GTEX-1IL2U-2826-SM-A96SR 1 C1 2 pieces; one piece composed of fibromuscular stroma and a few glandular structures (outlined); other contains fibromucular stroma and glandular component 5.6 Prostate Prostate 0002367 591 896 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990669 177460 0.956912 0.99211 0.691667 24906 1 76 0.00243727 122 0 6.16325e+07 0.0428931 798156 6.21227e+07 2.11601e+06 24943 3.06947e+07 0 0.265245 0.99211 0.68621 6.16325e+07 0.00300477 1.34263e+07 6.48255e+06 1.35761e+07 135 1.35668e+07 7.43739e+06 0.00272061 1.35194e+07 49.9124 0.0128481 0.99355 0 50.2774 GTEX-1IL2U-2926-SM-A8N8V 1 C1 4 pieces; Purkinje cells well visualized 6.7 Brain Brain - Cerebellum 0002037 599 888 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985112 603244 0.940916 0.987356 0.712008 26364 1 76 0.0114768 268 0 1.10032e+08 0.0587926 2.38554e+06 1.11441e+08 2.0788e+07 26400 5.46607e+07 0 0.228908 0.987356 0.703005 1.10032e+08 0.0108261 2.34361e+07 2.8773e+07 2.38894e+07 259 2.39859e+07 1.13067e+07 0.0111522 2.35667e+07 49.5592 0.0214062 0.9896 0 50.4789 GTEX-1IL2U-3026-SM-C1YSH 1 C1 4 pieces; mild to moderate autolysis 7.3 Brain Brain - Cortex 0001870 602 886 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989661 1.27494e+06 0.940417 0.992534 0.785742 24825 1 76 0.00213759 371 0 9.91373e+07 0.0593321 4.12978e+06 9.9883e+07 4.67474e+06 24853 4.92901e+07 0 0.154675 0.992534 0.779875 9.91373e+07 0.00283716 2.107e+07 3.65469e+07 2.15429e+07 361 2.14962e+07 9.77834e+06 0.00248636 2.13629e+07 49.8444 0.0413462 0.995407 0 50.5549 GTEX-1IL2V-0003-SM-G8OXR B1 Blood Whole Blood 0013756 786 BP-59640 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/15/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IL2V-0006-SM-CMKFN B1 8.9 Blood Whole Blood 0013756 786 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.981857 2.89679e+06 0.919798 0.982842 0.725378 19796 1 76 0.0023615 139 0 1.1157e+08 0.0794467 155396 1.13518e+08 7.95372e+06 19817 5.55646e+07 0 0.19442 0.982842 0.712932 1.1157e+08 0.00319461 2.44012e+07 1.73193e+08 2.46214e+07 167 2.46345e+07 2.51640e+07 0.00277763 2.46029e+07 49.9679 0.00136892 0.983826 0 50.2245 GTEX-1IL2V-0011-R10a-SM-CL55A B1, A1 5.8 Brain Brain - Frontal Cortex (BA9) 0009834 827 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992004 366945 0.968668 0.994003 0.864763 22031 1 76 0.00330352 377 0 1.10635e+08 0.031147 1.45879e+07 1.11303e+08 1.54358e+07 22046 5.50853e+07 0 0.103905 0.994003 0.859576 1.10635e+08 0.00457756 2.37598e+07 2.18504e+07 2.56027e+07 399 2.5042e+07 8.02993e+06 0.00393926 2.4454e+07 49.4061 0.131065 0.996001 0 51.8666 GTEX-1IL2V-0011-R11a-SM-ARU6T B1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 827 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992036 559323 0.950772 0.993319 0.748607 23482 1 76 0.00243655 201 0 8.37162e+07 0.0487469 1.62808e+06 8.42793e+07 2.836e+06 23514 4.16764e+07 0 0.202165 0.993319 0.743605 8.37162e+07 0.00304667 1.81849e+07 1.05496e+07 1.82292e+07 234 1.83009e+07 1.06318e+07 0.00274122 1.82061e+07 49.8702 0.0193177 0.994602 0 50.0608 GTEX-1IL2V-0011-R5a-SM-ARL78 B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 827 BP-66978 RNA isolation_PAXgene Tissue miRNA 09/10/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992433 701480 0.960388 0.992878 0.781693 23505 1 76 0.00224509 158 0 6.60382e+07 0.0393306 4.81231e+06 6.6512e+07 2.50842e+06 23528 3.28541e+07 0 0.178696 0.992878 0.776125 6.60382e+07 0.00271814 1.42395e+07 2.50396e+07 1.42902e+07 178 1.43734e+07 6.64342e+06 0.00248151 1.41758e+07 49.654 0.0723525 0.993322 0 50.0889 GTEX-1IL2V-0126-SM-CM2TX 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50 microns 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 975 1022 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992794 399964 0.967146 0.994297 0.766348 24641 1 76 0.00218489 242 0 9.43241e+07 0.0326408 589523 9.48652e+07 5.4447e+06 24677 4.69799e+07 0 0.200798 0.994297 0.761977 9.43241e+07 0.00300566 2.04122e+07 1.20204e+07 2.04836e+07 248 2.05207e+07 1.47355e+07 0.00259465 2.05058e+07 49.9818 0.00621432 0.995799 0 50.0874 GTEX-1IL2V-0226-SM-CMKI2 0 B1 2 pieces, ~10-15% fascia, vascular, peripheral nerve elements, rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 976 1021 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994246 141967 0.977874 0.994988 0.850736 22050 1 76 0.0022481 154 0 6.42168e+07 0.0218274 415008 6.45403e+07 4.58856e+06 22069 3.20108e+07 0 0.127137 0.994988 0.846472 6.42168e+07 0.00280627 1.41042e+07 6.52896e+06 1.42542e+07 157 1.41923e+07 1.28582e+07 0.00252698 1.42182e+07 50.0455 0.00643022 0.99573 0 50.2645 GTEX-1IL2V-0326-SM-COH4F 0 B1 2 pieces, nubbin of adherent fat/vascular elements up to ~1mm, delineated 7.7 Nerve Nerve - Tibial 0001323 980 1017 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99101 174352 0.966814 0.992315 0.812592 23485 1 76 0.00379626 159 0 7.07954e+07 0.0329237 216200 7.13437e+07 7.68776e+06 23512 3.52528e+07 0 0.154222 0.992315 0.806347 7.07954e+07 0.00464347 1.54566e+07 7.4569e+06 1.55321e+07 174 1.54857e+07 1.10192e+07 0.00421931 1.55981e+07 50.1808 0.0030304 0.993619 0 50.1219 GTEX-1IL2V-0426-SM-COH4G 0 B1 2 pieces, ath atherosis occludes ~30% of lumen, rep delineated 7.5 Blood Vessel Artery - Tibial 0007610 985 1012 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991619 356478 0.970868 0.99289 0.797955 22677 1 76 0.00373498 159 0 7.90347e+07 0.0287783 282771 7.96007e+07 8.10999e+06 22702 3.93422e+07 0 0.172913 0.99289 0.792282 7.90347e+07 0.0044344 1.71014e+07 6.03505e+06 1.71515e+07 174 1.71663e+07 1.38704e+07 0.00408424 1.71878e+07 50.0313 0.00355237 0.994162 0 50.0731 GTEX-1IL2V-0526-SM-ARL8B 0 B1 2 pieces, interstitial fat is ~5-10% of aliquot 8 Muscle Muscle - Skeletal 0011907 986 1011 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992361 1.49054e+06 0.963844 0.993177 0.827426 20746 1 76 0.00175284 135 0 7.56878e+07 0.0359536 1.08335e+06 7.62077e+07 2.26061e+06 20760 3.76042e+07 0 0.136418 0.993177 0.82178 7.56878e+07 0.00233622 1.61928e+07 1.98145e+07 1.62037e+07 159 1.65075e+07 1.5622e+07 0.00204429 1.59416e+07 49.1279 0.0142157 0.993994 0 50.0167 GTEX-1IL2V-0626-SM-ARU7S 0 B1 2 pieces, no abnormalities 6.2 Thyroid Thyroid 0002046 1038 959 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990671 308834 0.960737 0.991854 0.657815 23783 1 76 0.00253135 110 0 6.03389e+07 0.0389995 320796 6.08345e+07 2.12024e+06 23829 3.00469e+07 0 0.302922 0.991854 0.652456 6.03389e+07 0.00309801 1.31722e+07 6.24371e+06 1.32064e+07 120 1.32393e+07 7.66235e+06 0.00281434 1.32042e+07 49.9336 0.00527326 0.993036 0 50.0648 GTEX-1IL2V-0726-SM-ARZMB 1 B1 2 pieces, moderate congestion 5.7 Lung Lung 0008952 1039 958 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136,LCSET-8682 02/23/2016 TruSeq.v1 RNASEQ 0.982206 378959 0.960556 0.98348 0.712334 23709 1 76 0.00277234 117 0 6.08447e+07 0.0391209 509746 6.18667e+07 3.58454e+06 23747 3.01866e+07 0 0.248222 0.98348 0.700567 6.08447e+07 0.0039501 1.31362e+07 8.31072e+06 1.34886e+07 135 1.37115e+07 7.40942e+06 0.00336046 1.29866e+07 48.6424 0.00823942 0.984755 0 50.6619 GTEX-1IL2V-1126-SM-CMKGH 1 B1 2 pieces, noa abnormalities 6.5 Heart Heart - Atrial Appendage 0006631 1052 945 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.99437 283571 0.980194 0.995475 0.82375 22988 1 76 0.0026573 371 0 1.08414e+08 0.0196605 8.76226e+06 1.08906e+08 7.61090e+06 23014 5.405e+07 0 0.156444 0.995475 0.820023 1.08414e+08 0.00347125 2.37492e+07 2.43314e+07 2.45232e+07 353 2.44303e+07 1.01928e+07 0.00306382 2.39297e+07 49.4824 0.0804569 0.996581 0 50.8017 GTEX-1IL2V-1826-SM-ARU7R 2 B1 6 pieces, glomeruli present, prominent mesangium with 'wire loops', prominent interstitial hyalinization, moderate tubular autolysis 5.8 Kidney Kidney - Cortex 0001225 1074 923 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8135,LCSET-8682 02/23/2016 TruSeq.v1 RNASEQ 0.990608 579644 0.967154 0.991956 0.750237 27306 1 76 0.00252392 375 0 1.37018e+08 0.0320102 2.53552e+06 1.38129e+08 6.63909e+06 27365 6.81794e+07 0 0.216917 0.991956 0.744201 1.37018e+08 0.00350829 3.02421e+07 1.816e+07 3.04303e+07 368 3.04083e+07 1.75963e+07 0.00301544 3.04417e+07 50.0275 0.0183562 0.993303 0 50.1551 GTEX-1IL2V-1926-SM-B2LW8 0 B1 6 pieces, no dermal fat, squamous epithelium is ~35-45 microns 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1077 920 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8723 04/02/2016 TruSeq.v1 RNASEQ 0.989491 393565 0.975163 0.991126 0.756697 23268 1 76 0.00282254 144 0 6.85061e+07 0.0246049 554982 6.91194e+07 3.18647e+06 23299 3.40717e+07 0 0.218466 0.991126 0.749983 6.85061e+07 0.00400314 1.51305e+07 6.97426e+06 1.52666e+07 154 1.52652e+07 1.03519e+07 0.00341187 1.52386e+07 49.9565 0.00802932 0.992761 0 50.2239 GTEX-1IL2V-2026-SM-ARZMA 2 B1 6 pieces, mucosa up to ~1.2mm, ~30% thickness, moderately advanced autolysis 6.5 Stomach Stomach 0000945 1084 913 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985894 313226 0.970338 0.987584 0.785834 22390 1 76 0.00280727 123 0 5.78643e+07 0.0293999 920247 5.85918e+07 2.81358e+06 22407 2.87282e+07 0 0.184504 0.987584 0.776077 5.78643e+07 0.0038776 1.23668e+07 7.01082e+06 1.27809e+07 134 1.28841e+07 8.68349e+06 0.00334152 1.23509e+07 48.9434 0.0157061 0.989273 0 50.8234 GTEX-1IL2V-3026-SM-CYPSA 1 B1 4 pieces, no abnormalities 6 Brain Brain - Cerebellum 0002037 1156 841 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993654 940251 0.924618 0.994317 0.70192 24486 1 76 0.00262727 269 0 9.50748e+07 0.0750836 2.3402e+06 9.56181e+07 6.70539e+06 24518 4.73978e+07 0 0.222698 0.994317 0.697931 9.50748e+07 0.0029072 1.99703e+07 4.02389e+07 2.03979e+07 275 2.03651e+07 9.67106e+06 0.00276714 2.00656e+07 49.6296 0.0244745 0.99498 0 50.5297 GTEX-1IOXB-0003-SM-G8OXU B1 Blood Whole Blood 0013756 581 BP-59740 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/20/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IOXB-0006-SM-CMKFO B1 8.9 Blood Whole Blood 0013756 581 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.989828 378801 0.977405 0.991086 0.76728 18286 1 76 0.00253391 96 0 5.50151e+07 0.0219827 302158 5.55099e+07 4.056e+06 18298 2.73523e+07 0 0.210124 0.991086 0.760441 5.50151e+07 0.00346081 1.26958e+07 4.75894e+07 1.27515e+07 107 1.27861e+07 1.18656e+07 0.00299678 1.27336e+07 49.8971 0.00544331 0.992345 0 50.1096 GTEX-1IOXB-0011-R10a-SM-D3L8I B1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 611 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991852 605728 0.967854 0.994039 0.872977 23906 1 76 0.00233346 374 0 1.14446e+08 0.0316891 4.64133e+06 1.15132e+08 1.18127e+07 23926 5.69694e+07 0 0.094876 0.994039 0.867774 1.14446e+08 0.00317806 2.49623e+07 1.85388e+07 2.54381e+07 347 2.53815e+07 1.45594e+07 0.00275483 2.52308e+07 49.8512 0.0403131 0.996225 0 50.472 GTEX-1IOXB-0011-R11a-SM-A9G1X B1, A1 6.2 Brain Brain - Cerebellar Hemisphere 0002037 611 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983821 340363 0.958802 0.989811 0.804698 22600 1 76 0.00386077 267 0 8.62297e+07 0.0410098 5.1683e+06 8.71174e+07 8.52745e+06 22615 4.27626e+07 0 0.154104 0.989811 0.796498 8.62297e+07 0.00408202 1.85511e+07 2.43452e+07 1.89697e+07 293 1.89802e+07 5.48151e+06 0.00396929 1.8947e+07 49.9562 0.0593257 0.995801 0 50.5579 GTEX-1IOXB-0011-R1a-SM-D4P27 B1, A1 6.3 Brain Brain - Hippocampus 0001954 611 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993026 485420 0.964851 0.994622 0.860761 24272 1 76 0.00242991 375 0 1.22446e+08 0.0348567 7.08076e+06 1.23108e+08 1.53274e+07 24297 6.10077e+07 0 0.10409 0.994622 0.856132 1.22446e+08 0.00332029 2.65395e+07 2.07675e+07 2.75123e+07 371 2.73527e+07 1.29965e+07 0.00287438 2.68579e+07 49.5436 0.0575169 0.996219 0 50.8999 GTEX-1IOXB-0011-R7b-SM-CE6SM B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 611 BP-71887 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989744 640407 0.963584 0.991414 0.838797 23224 1 76 0.00771925 266 0 8.63722e+07 0.0361851 5.98192e+06 8.71202e+07 1.36045e+07 23243 4.29712e+07 0 0.124788 0.991414 0.831595 8.63722e+07 0.00724784 1.86673e+07 2.47099e+07 1.92129e+07 268 1.91921e+07 7.99086e+06 0.00748394 1.8799e+07 49.4826 0.0686628 0.993084 0 50.7202 GTEX-1IOXB-0126-SM-ARL8G 1 B1 6 pieces; well trimmed; up to 10% dermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 766 844 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990997 478551 0.971217 0.991233 0.776197 22037 1 76 0.00191479 132 0 5.23388e+07 0.0285108 243717 5.28017e+07 4.36217e+06 22065 2.60128e+07 0 0.19502 0.991233 0.769393 5.23388e+07 0.00248236 1.14276e+07 6.57180e+06 1.14656e+07 127 1.16361e+07 8.66084e+06 0.00219851 1.12717e+07 49.2048 0.00461571 0.99147 0 50.083 GTEX-1IOXB-0226-SM-CMKHY 1 B1 2 pieces; 5% fibrous content 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 772 838 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994055 257433 0.976636 0.99506 0.815424 23393 1 76 0.0021633 214 0 8.66795e+07 0.0229735 765490 8.71098e+07 6.41063e+06 23426 4.31914e+07 0 0.161212 0.99506 0.811396 8.66795e+07 0.00308663 1.91093e+07 8.23204e+06 1.9278e+07 233 1.92847e+07 1.42724e+07 0.0026245 1.91873e+07 49.8734 0.00878765 0.996066 0 50.2198 GTEX-1IOXB-0326-SM-CL55M 1 B1 2 pieces; 1% fat content 7.6 Muscle Muscle - Skeletal 0011907 778 832 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.9936 699285 0.981184 0.995185 0.860383 21502 1 76 0.00226735 372 0 1.24443e+08 0.0186106 1.41087e+06 1.25045e+08 1.63726e+07 21523 6.19899e+07 0 0.120801 0.995185 0.85624 1.24443e+08 0.00340699 2.69713e+07 1.32374e+07 2.74303e+07 361 2.76105e+07 2.4983e+07 0.00283626 2.69681e+07 49.4115 0.0112829 0.996769 0 50.4219 GTEX-1IOXB-0426-SM-CM2TU 1 B1 2 pieces; 20% fat and stromal content 5.7 Nerve Nerve - Tibial 0001323 782 828 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.991786 228765 0.962695 0.993017 0.747804 24595 1 76 0.0021007 206 0 8.56183e+07 0.0370129 412356 8.62204e+07 5.49076e+06 24635 4.26275e+07 0 0.21489 0.993017 0.742582 8.56183e+07 0.00304066 1.87294e+07 8.82932e+06 1.88218e+07 213 1.88301e+07 1.2113e+07 0.0025701 1.88214e+07 49.9885 0.00478258 0.994248 0 50.123 GTEX-1IOXB-0526-SM-ARL8F 1 B1 2 pieces: slight plaque well trimmed 7.4 Blood Vessel Artery - Tibial 0007610 786 824 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990172 941441 0.969939 0.990308 0.787519 20749 1 76 0.00191598 127 0 5.90106e+07 0.0296852 245912 5.95881e+07 4.15837e+06 20767 2.92912e+07 0 0.182419 0.990308 0.779887 5.90106e+07 0.00250785 1.26554e+07 4.88225e+06 1.26254e+07 141 1.29072e+07 9.93946e+06 0.00221187 1.23845e+07 48.9667 0.00412687 0.990444 0 49.9407 GTEX-1IOXB-0726-SM-A9G32 1 B1 2 pieces: 30% & 5% internal fibrous content 6.5 Heart Heart - Atrial Appendage 0006631 879 731 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846,LCSET-8170 11/17/2015 TruSeq.v1 RNASEQ 0.984819 279407 0.980176 0.990575 0.831034 22643 1 76 0.00198989 368 0 1.09689e+08 0.0196494 5.66001e+06 1.10733e+08 6.63848e+06 22665 5.44318e+07 0 0.149142 0.990575 0.823202 1.09689e+08 0.00311931 2.43109e+07 3.15074e+07 2.39787e+07 404 2.38475e+07 7.3607e+06 0.00254959 2.49698e+07 51.1495 0.0511141 0.996332 0 49.6561 GTEX-1IOXB-1026-SM-CJI4D 2 B1 2 pieces; 30% scar in 1; 10% fat in other 6.2 Thyroid Thyroid 0002046 901 709 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991911 537239 0.970455 0.993036 0.796806 24246 1 76 0.00209947 169 0 7.8534e+07 0.0292203 481926 7.90847e+07 5.18218e+06 24272 3.91035e+07 0 0.173649 0.993036 0.791257 7.8534e+07 0.00277121 1.72758e+07 8.20704e+06 1.74163e+07 196 1.74859e+07 1.25705e+07 0.00243496 1.72907e+07 49.7194 0.0060938 0.994161 0 50.2026 GTEX-1IOXB-1126-SM-CNNQ5 2 B1 2 pieces; severe vascular congestion, numerous pigmented alveolar macrophages and alveolar giant cells 6.1 Lung Lung 0008952 907 703 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989286 184926 0.963557 0.991332 0.7352 25397 1 76 0.00278504 161 0 7.84122e+07 0.0360795 612819 7.90978e+07 9.2522e+06 25437 3.90017e+07 0 0.228357 0.991332 0.728828 7.84122e+07 0.00392764 1.71093e+07 1.01101e+07 1.73214e+07 193 1.73038e+07 9.22869e+06 0.00335516 1.72822e+07 49.9687 0.00774761 0.993379 0 50.308 GTEX-1IOXB-1526-SM-A96T6 1 B1 2 pieces; reduced numbers of mature sperm 6.1 Testis Testis 0000473 935 675 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99096 267931 0.916492 0.992252 0.692891 33443 1 76 0.00198154 176 0 8.26231e+07 0.0832156 1.19221e+06 8.32682e+07 2.71203e+06 33511 4.11772e+07 0 0.223601 0.992252 0.687523 8.26231e+07 0.00237913 1.69338e+07 1.23913e+07 1.70651e+07 193 1.70684e+07 1.08834e+07 0.00218008 1.7021e+07 49.9305 0.0143177 0.993545 0 50.1931 GTEX-1IOXB-1926-SM-ARL8E 0 B1 2 pieces; fibrofatty tissue with no mammary ducts 6 Breast Breast - Mammary Tissue 0008367 964 646 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.990816 401341 0.975276 0.991069 0.79911 21986 1 76 0.00193585 141 0 6.3351e+07 0.024366 487616 6.39219e+07 4.74428e+06 22013 3.14992e+07 0 0.176166 0.991069 0.791973 6.3351e+07 0.00255154 1.39831e+07 9.55324e+06 1.4016e+07 162 1.41767e+07 9.59367e+06 0.00224362 1.38393e+07 49.3978 0.00762831 0.991322 0 50.0588 GTEX-1IOXB-2626-SM-CJI2N 2 B1 6 pieces; mucosa severely autolyzed, muscularis intact 6.5 Colon Colon - Transverse 0001157 1004 606 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.990747 546373 0.975917 0.991833 0.804518 23232 1 76 0.00288615 271 0 8.86792e+07 0.0203913 1.60891e+06 8.94094e+07 5.53347e+06 23262 4.39942e+07 0 0.171398 0.991833 0.797948 8.86792e+07 0.0033375 1.975e+07 1.41662e+07 2.0023e+07 258 2.00613e+07 1.27578e+07 0.00311158 1.97902e+07 49.6598 0.0179949 0.99292 0 50.3433 GTEX-1IOXB-2726-SM-CM2RI 1 B1 6 pieces; well trimmed; up to 10% dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 986 624 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992433 297021 0.97198 0.993882 0.747853 24688 1 76 0.00213958 219 0 9.38718e+07 0.027775 423002 9.44496e+07 5.89565e+06 24734 4.67516e+07 0 0.224127 0.993882 0.743278 9.38718e+07 0.00276525 2.06596e+07 1.02013e+07 2.07114e+07 229 2.07669e+07 1.51277e+07 0.00245196 2.07336e+07 49.9599 0.0044786 0.995331 0 50.0626 GTEX-1IOXB-2826-SM-AHZ32 1 B1 2 pieces; smaller piece contains slightly inflamed salivary gland and adjacent fibrous stroma; nearby piece of skin arrowed; larger piece is fibroadipose & muscular tissue 7.9 Salivary Gland Minor Salivary Gland 0006330 1056 554 BP-67188 RNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.982694 421190 0.970451 0.984187 0.775766 25070 1 76 0.00754202 247 0 1.03792e+08 0.0266297 346144 1.0546e+08 1.95167e+07 25109 5.14792e+07 0 0.194684 0.984187 0.763499 1.03792e+08 0.00888901 2.35651e+07 3.11883e+07 2.39019e+07 253 2.39564e+07 1.58256e+07 0.00821449 2.3659e+07 49.6877 0.00328223 0.98568 0 50.3548 GTEX-1IOXB-2926-SM-C1YQ7 1 B1 1 piece; well dissected with anterior and posterior lobes well defined (arrowed) 6.7 Pituitary Pituitary 0000007 1093 517 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.979418 473751 0.959625 0.982228 0.760047 25373 1 76 0.0019509 203 0 8.1256e+07 0.0401114 320474 8.27262e+07 3.83115e+06 25416 4.03936e+07 0 0.199577 0.982228 0.74654 8.1256e+07 0.00243611 1.67137e+07 1.03092e+07 1.6929e+07 213 1.69927e+07 1.26557e+07 0.00219281 1.68463e+07 49.7837 0.00387391 0.985038 0 50.3199 GTEX-1IOXB-3126-SM-CKZO1 1 B1 4 pieces; 2 smaller pieces have admixture with white matter [arrowed] 5.6 Brain Brain - Cortex 0001870 1097 513 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992057 579721 0.959578 0.994363 0.836778 22075 1 76 0.00168608 367 0 8.94174e+07 0.040195 7.63168e+06 8.99243e+07 8.3141e+06 22085 4.45248e+07 0 0.122799 0.994363 0.832062 8.94174e+07 0.00301018 1.90635e+07 3.96327e+07 1.98876e+07 352 1.98069e+07 6.7748e+06 0.0023466 1.93076e+07 49.3618 0.0848679 0.996669 0 51.058 GTEX-1IY9M-0004-SM-G8OXJ B1 Blood Whole Blood 0013756 963 BP-59740 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/20/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1IY9M-0005-SM-CNNOU B1 8.9 Blood Whole Blood 0013756 963 BP-59701 RNA isolation_PAXgene Blood RNA (Manual) 01/16/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989573 1.57568e+06 0.953602 0.991748 0.742542 21802 1 76 0.00282084 273 0 1.12932e+08 0.0458139 575708 1.13872e+08 1.29021e+07 21829 5.61984e+07 0 0.21106 0.991748 0.736415 1.12932e+08 0.00389335 2.49286e+07 7.57357e+07 2.50958e+07 268 2.51836e+07 2.12318e+07 0.00335592 2.51042e+07 49.9211 0.00505575 0.993922 0 50.1671 GTEX-1IY9M-0011-R11b-SM-A96TI B1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 1019 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99257 380823 0.952495 0.993865 0.771988 23713 1 76 0.00214934 271 0 9.18233e+07 0.047079 1.28134e+06 9.23901e+07 3.4089e+06 23742 4.57441e+07 0 0.180508 0.993865 0.767251 9.18233e+07 0.00233957 1.98984e+07 1.15095e+07 2.00848e+07 263 2.00955e+07 1.23779e+07 0.00224433 1.99914e+07 49.8702 0.0138688 0.995159 0 50.2332 GTEX-1IY9M-0011-R1a-SM-EXURZ B1, A1 6.6 Brain Brain - Hippocampus 0001954 1019 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992418 610793 0.967406 0.993399 0.853438 22677 1 76 0.00161586 160 0 6.40032e+07 0.0321976 2.43487e+06 6.44285e+07 1.86048e+06 22691 3.18644e+07 0 0.113968 0.993399 0.847804 6.40032e+07 0.00224589 1.4088e+07 5.74288e+06 1.42798e+07 196 1.42522e+07 8.36864e+06 0.00193056 1.41666e+07 49.8493 0.0377918 0.99438 0 50.3381 GTEX-1IY9M-0011-R2a-SM-D4P29 B1, A1 6.9 Brain Brain - Substantia nigra 0002038 1019 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993583 428055 0.967813 0.99512 0.859032 24343 1 76 0.00232545 380 0 1.1773e+08 0.0319116 7.65238e+06 1.18308e+08 1.43973e+07 24370 5.86691e+07 0 0.108782 0.99512 0.85484 1.1773e+08 0.00338936 2.58833e+07 1.79173e+07 2.65893e+07 359 2.6442e+07 1.49231e+07 0.00285659 2.61868e+07 49.7575 0.0646821 0.996657 0 50.6727 GTEX-1IY9M-0011-R4a-SM-C1YQ2 B1, A1 6.3 Brain Brain - Amygdala 0001876 1019 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.99025 805733 0.965393 0.992844 0.85501 24007 1 76 0.00175202 372 0 9.15422e+07 0.0342434 4.44491e+06 9.2202e+07 4.31833e+06 24024 4.55131e+07 0 0.110383 0.992844 0.848891 9.15422e+07 0.00216942 1.98799e+07 1.46602e+07 2.03282e+07 358 2.02807e+07 1.15387e+07 0.00196018 2.0126e+07 49.8085 0.0482084 0.995438 0 50.5575 GTEX-1IY9M-0011-R5a-SM-A9SLX B1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 1019 BP-65255 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990051 450712 0.959585 0.991671 0.824299 24350 1 76 0.00637435 151 0 7.53151e+07 0.0399946 2.48414e+06 7.59477e+07 1.34099e+07 24373 3.74954e+07 0 0.135286 0.991671 0.817434 7.53151e+07 0.00752288 1.63335e+07 1.583e+07 1.65742e+07 182 1.65796e+07 9.62112e+06 0.00694768 1.64322e+07 49.7768 0.0327086 0.993292 0 50.3658 GTEX-1IY9M-0011-R6a-SM-D4P28 B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1019 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993933 484428 0.964869 0.995239 0.847102 25273 1 76 0.0023833 376 0 1.23328e+08 0.0348054 6.15507e+06 1.23918e+08 1.31145e+07 25297 6.14613e+07 0 0.117766 0.995239 0.843069 1.23328e+08 0.00313597 2.68284e+07 1.92071e+07 2.74986e+07 357 2.74038e+07 1.55046e+07 0.00275914 2.70587e+07 49.6832 0.0496706 0.996546 0 50.6168 GTEX-1IY9M-0011-R7a-SM-D4P49 B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1019 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993607 638813 0.96521 0.994789 0.850569 25294 1 76 0.00228649 378 0 1.57236e+08 0.0345203 7.99598e+06 1.58059e+08 1.87007e+07 25313 7.83825e+07 0 0.114641 0.994789 0.846137 1.57236e+08 0.00308239 3.39746e+07 3.85381e+07 3.47998e+07 358 3.46686e+07 1.79216e+07 0.00268397 3.4259e+07 49.7028 0.0505885 0.99597 0 50.5999 GTEX-1IY9M-0011-R8a-SM-EYYWW B1, A1 6.1 Brain Brain - Hypothalamus 0001898 1019 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98882 214611 0.964133 0.991082 0.839045 23966 1 76 0.00211879 277 0 7.46271e+07 0.0355185 3.09349e+06 7.52986e+07 2.71784e+06 23990 3.71379e+07 0 0.125088 0.991082 0.831563 7.46271e+07 0.00311548 1.64064e+07 6.87902e+06 1.66329e+07 257 1.65803e+07 9.71491e+06 0.00261599 1.66021e+07 50.0329 0.041083 0.993345 0 50.3428 GTEX-1IY9M-0011-R9b-SM-D3L8J B1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1019 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992354 419927 0.959318 0.994213 0.833099 23494 1 76 0.00251302 280 0 8.37627e+07 0.0403496 1.75083e+06 8.42503e+07 8.09488e+06 23512 4.16997e+07 0 0.126219 0.994213 0.828278 8.37627e+07 0.0035779 1.84548e+07 8.14778e+06 1.88056e+07 262 1.86343e+07 1.16368e+07 0.00304446 1.87745e+07 50.1874 0.0207813 0.996072 0 50.4707 GTEX-1IY9M-0126-SM-D3L8S 1 B1 6 pieces; ~10% internal/external fat, epidermis measures ~34 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1117 600 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991166 352147 0.968804 0.99319 0.790848 24338 1 76 0.00260803 178 0 7.46728e+07 0.0309113 312169 7.51848e+07 7.35666e+06 24369 3.71604e+07 0 0.177956 0.99319 0.785462 7.46728e+07 0.00365092 1.61821e+07 7.35759e+06 1.63338e+07 167 1.63575e+07 1.32538e+07 0.00312841 1.63025e+07 49.9158 0.00415202 0.995213 0 50.2332 GTEX-1IY9M-0226-SM-CMKHP 1 B1 2 pieces; mature adipose tissue and ~15% fibrovascular component 7 Adipose Tissue Adipose - Subcutaneous 0002190 1123 594 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.99544 200802 0.975103 0.996105 0.821296 22953 1 76 0.00205035 180 0 7.68649e+07 0.0245403 253769 7.71655e+07 5.8933e+06 22974 3.83336e+07 0 0.153808 0.996105 0.818097 7.68649e+07 0.0023157 1.68757e+07 6.64515e+06 1.70226e+07 190 1.70164e+07 1.47196e+07 0.00218294 1.69312e+07 49.8745 0.00328863 0.996769 0 50.2167 GTEX-1IY9M-0326-SM-ARZMN 2 B1 2 pieces; skeletal muscle with small portion of fat, one contains nerves (arrows) 8.5 Muscle Muscle - Skeletal 0011907 1129 588 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988665 860804 0.980537 0.990673 0.852859 19027 1 76 0.00215477 109 0 5.6154e+07 0.0192287 692258 5.66827e+07 2.42149e+06 19035 2.78358e+07 0 0.127677 0.990673 0.844905 5.6154e+07 0.00327152 1.19001e+07 9.48492e+06 1.20888e+07 126 1.23373e+07 1.16149e+07 0.00271201 1.17395e+07 48.7587 0.0122129 0.992681 0 50.3932 GTEX-1IY9M-0426-SM-ARZMO 1 B1 2 pieces; 20% and 30% predominantly internal fat 6.8 Nerve Nerve - Tibial 0001323 1135 582 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987392 742797 0.962215 0.988822 0.683266 23966 1 76 0.00271313 133 0 6.10366e+07 0.0374831 221348 6.17266e+07 3.2766e+06 24008 3.02481e+07 0 0.278949 0.988822 0.675629 6.10366e+07 0.00392587 1.33013e+07 5.99047e+06 1.35223e+07 123 1.38792e+07 8.57616e+06 0.00331862 1.30221e+07 48.4071 0.00358594 0.990253 0 50.412 GTEX-1IY9M-0626-SM-D4P2L 1 B1 2 pieces; includes trivial fat 7 Heart Heart - Atrial Appendage 0006631 1166 551 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993949 251869 0.9763 0.995349 0.825194 23680 1 76 0.00215405 371 0 1.16225e+08 0.0234615 3.94921e+06 1.16768e+08 1.24846e+07 23708 5.79365e+07 0 0.151106 0.995349 0.821356 1.16225e+08 0.00371417 2.51617e+07 1.77652e+07 2.55217e+07 349 2.55364e+07 1.60273e+07 0.00293301 2.528e+07 49.7477 0.0338209 0.99675 0 50.3551 GTEX-1IY9M-1026-SM-A96TG 3 B1 2 pieces; fibrosis and hyalinization, multinodular, moderate to severe autolysis 6.9 Thyroid Thyroid 0002046 1192 525 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99196 179212 0.967543 0.993281 0.800232 23924 1 76 0.00205486 161 0 7.08349e+07 0.0321018 231314 7.1314e+07 2.58588e+06 23952 3.52965e+07 0 0.167311 0.993281 0.794855 7.08349e+07 0.00233481 1.54605e+07 7.24874e+06 1.56337e+07 169 1.56327e+07 1.24152e+07 0.00219465 1.55526e+07 49.8716 0.0032436 0.994603 0 50.2784 GTEX-1IY9M-1126-SM-A9SLV 2 B1 2 pieces; severe congestion and pulmonary hemorrhage 6.2 Lung Lung 0008952 1197 520 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.990435 207574 0.973331 0.991765 0.759826 24429 1 76 0.00518271 145 0 7.73031e+07 0.0263183 320739 7.7945e+07 9.82198e+06 24459 3.84726e+07 0 0.213506 0.991765 0.753569 7.73031e+07 0.00615026 1.71271e+07 9.90218e+06 1.7201e+07 163 1.72164e+07 1.15879e+07 0.00566583 1.72116e+07 49.9931 0.00411494 0.993094 0 50.1078 GTEX-1IY9M-1226-SM-ACKX1 1 B1 2 pieces; lobulated mature adipose tissue, 1 piece has central defect (?poor fixation), fragment of skeletal muscle 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1200 517 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991494 321630 0.969192 0.993236 0.779097 25357 1 76 0.0028436 276 0 1.07341e+08 0.0305298 581363 1.08072e+08 1.43228e+07 25397 5.34437e+07 0 0.190095 0.993236 0.773827 1.07341e+08 0.00376203 2.34757e+07 1.3758e+07 2.37755e+07 309 2.37939e+07 1.5534e+07 0.00330201 2.36382e+07 49.8358 0.00537942 0.994978 0 50.3172 GTEX-1IY9M-1626-SM-AHZ39 1 B1 6 pieces; 0.5mm thick stratified squamous epithelium and muscularis mucosae, congestion 7.4 Esophagus Esophagus - Mucosa 0006920 1225 492 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988248 391793 0.969406 0.989677 0.765875 25207 1 76 0.00700199 167 0 1.01636e+08 0.030262 478497 1.02696e+08 1.91656e+07 25240 5.05709e+07 0 0.203531 0.989677 0.757969 1.01636e+08 0.00859195 2.25755e+07 1.43501e+07 2.28588e+07 200 2.28346e+07 1.61004e+07 0.00779582 2.2745e+07 49.9017 0.00465936 0.991105 0 50.3118 GTEX-1IY9M-2526-SM-C1YQF 2 B1 2 pieces; spermatogenesis present 6.8 Testis Testis 0000473 1271 446 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988341 810783 0.921646 0.99079 0.693411 34039 1 76 0.00195794 221 0 1.01517e+08 0.0780613 887159 1.0246e+08 4.08713e+06 34113 5.0498e+07 0 0.228235 0.99079 0.687025 1.01517e+08 0.00233073 2.09441e+07 1.67921e+07 2.1109e+07 226 2.12537e+07 1.55364e+07 0.00214387 2.10077e+07 49.709 0.00865857 0.99324 0 50.1961 GTEX-1IY9M-2726-SM-CMKG5 1 B1 2 pieces; 1 piece shows dense fibrous stroma and scattered ductal structures, 2nd is composed of 50% fat and 50% fibrous tissue 8.1 Breast Breast - Mammary Tissue 0008367 1279 438 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994086 300221 0.963527 0.995017 0.713513 25872 1 76 0.00222874 175 0 8.62401e+07 0.0361722 434400 8.6672e+07 6.26063e+06 25931 4.29759e+07 0 0.250014 0.995017 0.709957 8.62401e+07 0.00290099 1.8877e+07 8.20431e+06 1.90088e+07 190 1.90342e+07 1.27667e+07 0.00256455 1.89305e+07 49.8634 0.005012 0.995947 0 50.174 GTEX-1IY9M-2826-SM-ARU8H 1 B1 6 pieces; hair-bearing skin with small amounts of periadnexal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1297 420 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.99202 446974 0.964469 0.993324 0.752577 23815 1 76 0.00198256 143 0 6.2618e+07 0.0353105 658074 6.30388e+07 2.03638e+06 23837 3.11924e+07 0 0.211892 0.993324 0.747553 6.2618e+07 0.00289438 1.37363e+07 1.01559e+07 1.37967e+07 142 1.38352e+07 9.9451e+06 0.00243787 1.3776e+07 49.8929 0.0104392 0.994629 0 50.1097 GTEX-1IY9M-2926-SM-A96TH 1 B1 2 pieces; 1 piece is salivary gland elements with mild chronic inflammation and detached nerve fragment (arrow), 2nd is ~10-15% salivary gland(outlined) surrounded by lip/stroma 8.9 Salivary Gland Minor Salivary Gland 0006330 1304 413 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991926 305310 0.974791 0.993242 0.81499 23964 1 76 0.00196772 314 0 8.95487e+07 0.0242824 249241 9.0158e+07 2.59305e+06 23999 4.4606e+07 0 0.1598 0.993242 0.809482 8.95487e+07 0.00245068 2.0316e+07 1.86882e+07 2.04481e+07 275 2.04832e+07 1.71451e+07 0.00220888 2.03932e+07 49.8899 0.00276449 0.994557 0 50.1621 GTEX-1IY9M-3026-SM-A9G37 2 B1 4 pieces; excessive white matter 7.4 Brain Brain - Cortex 0001870 1341 376 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.989045 360154 0.962605 0.99294 0.817033 24322 1 76 0.00346506 267 0 9.006e+07 0.037003 3.27908e+06 9.07004e+07 7.30169e+06 24341 4.47656e+07 0 0.145572 0.99294 0.811265 9.006e+07 0.00369903 1.96216e+07 1.8266e+07 1.98191e+07 272 1.98575e+07 1.06435e+07 0.00358007 1.98746e+07 50.0215 0.0361529 0.996834 0 50.2503 GTEX-1IY9M-3126-SM-AHZ3A 2 B1 4 pieces; 2 are largely white matter 8.1 Brain Brain - Cerebellum 0002037 1342 375 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987076 470251 0.949861 0.988823 0.721967 24775 1 76 0.00685375 156 0 9.7365e+07 0.0497264 1.04468e+06 9.84656e+07 1.76745e+07 24812 4.84058e+07 0 0.227894 0.988823 0.713898 9.7365e+07 0.00866756 2.10719e+07 1.39699e+07 2.1251e+07 200 2.12841e+07 1.22083e+07 0.00775905 2.11912e+07 49.8905 0.0106096 0.99057 0 50.2117 GTEX-1IY9M-3226-SM-D4P2M 2 B1 1 piece; moderate autolysis of adenohypophysis; interstitial fibrosis and focal calcification, rim of dense fibrous tissue with vessels consistent with dura mater (outlined) 7.1 Pituitary Pituitary 0000007 1344 373 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.9935 448330 0.958556 0.994715 0.759084 27172 1 76 0.00255925 375 0 1.22719e+08 0.0412091 596504 1.23371e+08 1.56669e+07 27222 6.11567e+07 0 0.199472 0.994715 0.755072 1.22719e+08 0.0033476 2.58806e+07 1.76311e+07 2.62812e+07 331 2.63003e+07 1.73937e+07 0.00295294 2.60028e+07 49.7155 0.00483503 0.995929 0 50.3841 GTEX-1J1OQ-0002-SM-G8OXM B1 Blood Whole Blood 0013756 1211 BP-59740 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/20/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J1OQ-0011-R10a-SM-A9G1Y B1, A1 6.6 Brain Brain - Frontal Cortex (BA9) 0009834 1210 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.988136 380448 0.962544 0.992186 0.837134 24522 1 76 0.00403239 269 0 8.91099e+07 0.0370821 4.50095e+06 8.98117e+07 8.38485e+06 24542 4.42748e+07 0 0.12541 0.992186 0.830593 8.91099e+07 0.00374542 1.9402e+07 1.53398e+07 1.96616e+07 267 1.97203e+07 1.04807e+07 0.00389136 1.96425e+07 49.9011 0.0501154 0.996237 0 50.3323 GTEX-1J1OQ-0011-R11a-SM-A96S3 B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 1210 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990997 581922 0.948027 0.992588 0.733842 23832 1 76 0.00229958 270 0 9.62866e+07 0.0514424 1.3456e+06 9.70056e+07 3.46825e+06 23872 4.79268e+07 0 0.214185 0.992588 0.728403 9.62866e+07 0.00261198 2.08343e+07 1.45968e+07 2.09374e+07 258 2.10233e+07 1.24554e+07 0.00245553 2.0887e+07 49.8375 0.0138713 0.99418 0 50.1234 GTEX-1J1OQ-0011-R1a-SM-A9G1Z B1, A1 5.9 Brain Brain - Hippocampus 0001954 1210 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986443 363798 0.959957 0.991474 0.840484 22920 1 76 0.00395989 265 0 7.82935e+07 0.0398471 6.79215e+06 7.89668e+07 6.97388e+06 22937 3.88723e+07 0 0.119473 0.991474 0.833318 7.82935e+07 0.00439852 1.70102e+07 2.01791e+07 1.72771e+07 268 1.72827e+07 6.18155e+06 0.00417524 1.73266e+07 50.0635 0.0860128 0.996506 0 50.3891 GTEX-1J1OQ-0011-R2b-SM-ARU88 B1, A1 6.2 Brain Brain - Substantia nigra 0002038 1210 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991018 287943 0.971809 0.992323 0.858267 20837 1 76 0.00216708 277 0 7.77504e+07 0.0280371 6.7495e+06 7.83519e+07 2.4589e+06 20844 3.87525e+07 0 0.113542 0.992323 0.851678 7.77504e+07 0.00282469 1.70717e+07 1.67226e+07 1.76009e+07 301 1.73787e+07 6.4014e+06 0.00249545 1.73633e+07 49.9778 0.0861434 0.993627 0 50.763 GTEX-1J1OQ-0011-R3b-SM-D4P2B B1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1210 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993388 478913 0.968682 0.995104 0.876892 23525 1 76 0.00248389 373 0 1.10312e+08 0.0309522 8.13954e+06 1.10855e+08 1.38452e+07 23547 5.49549e+07 0 0.0917901 0.995104 0.872598 1.10312e+08 0.00372423 2.40672e+07 2.08153e+07 2.46885e+07 345 2.46504e+07 1.30755e+07 0.00310299 2.42629e+07 49.6039 0.0734253 0.99682 0 50.6372 GTEX-1J1OQ-0011-R4a-SM-D4P2A B1, A1 6.9 Brain Brain - Amygdala 0001876 1210 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993698 482198 0.967589 0.995236 0.867457 23493 1 76 0.00256919 373 0 1.14845e+08 0.0321227 1.09729e+07 1.15395e+08 1.37711e+07 23512 5.72332e+07 0 0.100132 0.995236 0.863324 1.14845e+08 0.00371122 2.49995e+07 2.6152e+07 2.59596e+07 363 2.57455e+07 1.29436e+07 0.00313932 2.53529e+07 49.6159 0.0950899 0.996775 0 50.9421 GTEX-1J1OQ-0011-R5a-SM-D3L8K B1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 1210 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992081 553610 0.966308 0.994269 0.868092 24239 1 76 0.00262506 374 0 1.06491e+08 0.0332655 4.58137e+06 1.07105e+08 1.11832e+07 24258 5.30104e+07 0 0.0982159 0.994269 0.863117 1.06491e+08 0.00360917 2.32344e+07 1.67688e+07 2.36852e+07 336 2.36901e+07 1.47036e+07 0.00311603 2.34368e+07 49.7313 0.0427746 0.996457 0 50.4803 GTEX-1J1OQ-0011-R6a-SM-ARU86 B1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1210 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993439 618728 0.954124 0.994603 0.813248 24315 1 76 0.00224842 267 0 8.56022e+07 0.0456211 6.14957e+06 8.60666e+07 2.86384e+06 24334 4.26604e+07 0 0.140876 0.994603 0.808859 8.56022e+07 0.00280963 1.845e+07 2.2038e+07 1.87692e+07 289 1.87155e+07 8.08056e+06 0.00252869 1.85904e+07 49.8324 0.0714512 0.995768 0 50.4288 GTEX-1J1OQ-0011-R7b-SM-ARU87 B1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 1210 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992963 752007 0.952217 0.994306 0.818219 24848 1 76 0.0021335 269 0 8.55062e+07 0.0473847 3.69217e+06 8.59959e+07 2.81641e+06 24869 4.25894e+07 0 0.133998 0.994306 0.81356 8.55062e+07 0.00279376 1.84602e+07 2.02947e+07 1.87246e+07 269 1.87192e+07 1.08271e+07 0.00246318 1.85631e+07 49.7906 0.0429343 0.995649 0 50.3555 GTEX-1J1OQ-0011-R8a-SM-ACKVE B1, A1 6.4 Brain Brain - Hypothalamus 0001898 1210 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992944 289706 0.967194 0.994424 0.839839 24700 1 76 0.00297434 274 0 1.07989e+08 0.0325101 7.38114e+06 1.08595e+08 1.39876e+07 24721 5.37945e+07 0 0.127356 0.994424 0.835156 1.07989e+08 0.00390489 2.36804e+07 2.19899e+07 2.40427e+07 318 2.39599e+07 1.11222e+07 0.00343892 2.38961e+07 49.9333 0.0679696 0.995904 0 50.3795 GTEX-1J1OQ-0011-R9b-SM-ARZMK B1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 1210 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987127 615060 0.957083 0.989286 0.801228 22321 1 76 0.00259905 155 0 5.79907e+07 0.0425821 1.96653e+06 5.86188e+07 2.88904e+06 22337 2.87629e+07 0 0.155856 0.989286 0.792643 5.79907e+07 0.00372452 1.25963e+07 1.08567e+07 1.30716e+07 149 1.31503e+07 7.97091e+06 0.00316055 1.26248e+07 48.9805 0.0335478 0.991444 0 50.9259 GTEX-1J1OQ-0126-SM-D4P2N 0 B1 6 pieces, no dermal fat. Squmous epithelium is ~40 microns 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1238 1397 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992135 215562 0.972905 0.993593 0.722016 22819 1 76 0.00269874 171 0 8.38755e+07 0.0269247 617372 8.44164e+07 1.04745e+07 22867 4.17737e+07 0 0.250889 0.993593 0.71739 8.38755e+07 0.0039713 1.84985e+07 9.10899e+06 1.86816e+07 183 1.8641e+07 1.15997e+07 0.00333409 1.86545e+07 50.018 0.00731342 0.995052 0 50.2462 GTEX-1J1OQ-0226-SM-CYPSH 0 B1 6 pieces. No dermal fat. Squamous epithelium is ~20-30 microns 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1239 1396 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994485 235033 0.971193 0.995226 0.780863 22591 1 76 0.00232763 177 0 7.20063e+07 0.0286292 346792 7.23517e+07 5.3523e+06 22620 3.59039e+07 0 0.19033 0.995226 0.777136 7.20063e+07 0.00281201 1.57309e+07 7.29785e+06 1.58652e+07 172 1.58152e+07 1.11366e+07 0.00256964 1.58345e+07 50.0305 0.00479314 0.995968 0 50.2125 GTEX-1J1OQ-0326-SM-CYPTJ 0 B1 2 pieces, 15-20% fascia/vascular elements, rep. delineated 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 1239 1396 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994024 140256 0.980176 0.994711 0.839094 20847 1 76 0.00239075 146 0 6.17077e+07 0.0195599 660002 6.20358e+07 4.19051e+06 20862 3.07669e+07 0 0.141082 0.994711 0.834656 6.17077e+07 0.00289254 1.36792e+07 6.13347e+06 1.38888e+07 166 1.38055e+07 9.22231e+06 0.00264147 1.38009e+07 49.9916 0.0106391 0.995399 0 50.38 GTEX-1J1OQ-0426-SM-A9SLI 0 B1 2 pieces, mild atorphy; ~30-40% interstitial fat/vasuclar elements, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 1240 1395 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990387 285693 0.97504 0.992016 0.826207 23270 1 76 0.00613651 209 0 1.02089e+08 0.0247029 504351 1.0291e+08 1.7021e+07 23298 5.08563e+07 0 0.148833 0.992016 0.81961 1.02089e+08 0.00817312 2.20858e+07 1.1256e+07 2.23154e+07 231 2.23237e+07 1.99996e+07 0.00715315 2.22224e+07 49.8863 0.00490087 0.993645 0 50.2586 GTEX-1J1OQ-0526-SM-A9G2P 1 B1 2 pieces, no abnormalities 6.8 Thyroid Thyroid 0002046 1242 1393 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.986326 192560 0.969225 0.990855 0.775791 23504 1 76 0.00405681 123 0 6.70413e+07 0.0304464 125926 6.766e+07 6.41355e+06 23533 3.32857e+07 0 0.193434 0.990855 0.768696 6.70413e+07 0.00406616 1.45923e+07 7.16806e+06 1.48229e+07 133 1.49355e+07 1.20359e+07 0.0040614 1.47578e+07 49.7007 0.00186116 0.995384 0 50.3919 GTEX-1J1OQ-0626-SM-ACKWG 0 B1 2 pieces, no atherosis or adherent fat 7 Blood Vessel Artery - Tibial 0007610 1248 1387 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991637 283464 0.970556 0.993063 0.795594 22673 1 76 0.00297316 283 0 1.14252e+08 0.0290691 537300 1.1505e+08 1.59219e+07 22708 5.68821e+07 0 0.174962 0.993063 0.790075 1.14252e+08 0.00359579 2.44657e+07 1.09093e+07 2.47137e+07 290 2.47137e+07 1.98927e+07 0.00328403 2.46173e+07 49.9023 0.00467013 0.994489 0 50.2521 GTEX-1J1OQ-0826-SM-CXZJG 1 B1 2 pieces, advanced cirrhosis and steatosis 5.6 Liver Liver 0001114 1252 1383 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 EXCLUDE 0.993537 369172 0.970427 0.994932 0.784312 23595 1 76 0.00228172 201 0 8.98985e+07 0.0293767 1.18526e+06 9.03565e+07 5.93641e+06 23624 4.4792e+07 0 0.186115 0.994932 0.780337 8.98985e+07 0.00318202 1.96695e+07 1.35075e+07 2.01663e+07 245 2.00855e+07 1.18116e+07 0.00273124 1.98681e+07 49.7279 0.0131176 0.996326 0 50.6236 GTEX-1J1OQ-0926-SM-CJI34 1 B1 2 pieces, mild-moderate congestion 6.8 Lung Lung 0008952 1255 1380 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993024 659277 0.978393 0.993968 0.788779 22910 1 76 0.00228719 146 0 7.07179e+07 0.0212589 231534 7.11471e+07 4.44866e+06 22935 3.5205e+07 0 0.189615 0.993968 0.784021 7.07179e+07 0.00266073 1.57539e+07 7.15001e+06 1.58039e+07 154 1.5869e+07 1.33708e+07 0.00247378 1.57547e+07 49.8193 0.0032543 0.994913 0 50.0793 GTEX-1J1OQ-1426-SM-AHZ3P 2 B1 6 pieces, glomeruli present, cystic change and advance autolysis of tubules, interstitial fibrosis and chronic nephritis 6 Kidney Kidney - Cortex 0001225 1276 1359 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988983 168517 0.97231 0.990251 0.830019 22612 1 76 0.0070288 112 0 5.96695e+07 0.0274765 2.6503e+06 6.0257e+07 1.04118e+07 22628 2.97104e+07 0 0.142291 0.990251 0.821926 5.96695e+07 0.00849708 1.31513e+07 9.80022e+06 1.34296e+07 135 1.33894e+07 7.43136e+06 0.007762 1.32533e+07 49.7447 0.0439833 0.991518 0 50.5235 GTEX-1J1OQ-1526-SM-CJI4E 1 B1 2 pieces, fascia and vasculr elements are ~10% of tissue, rep delineated 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1279 1356 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992607 717217 0.982554 0.993748 0.791176 22590 1 76 0.00221835 196 0 8.40902e+07 0.0170936 347585 8.46192e+07 5.17806e+06 22617 4.18681e+07 0 0.191378 0.993748 0.78623 8.40902e+07 0.00261671 1.87651e+07 1.00832e+07 1.88924e+07 206 1.89648e+07 1.47745e+07 0.0024173 1.8789e+07 49.7671 0.00410764 0.994888 0 50.1691 GTEX-1J1OQ-1626-SM-CE6TB 1 B1 2 pieces, post menopausal atrophy 6.8 Ovary Ovary 0000992 1283 1352 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987481 362650 0.972632 0.989015 0.771525 23303 1 76 0.00782162 143 0 7.57753e+07 0.0270424 58970 7.6617e+07 1.24393e+07 23332 3.76765e+07 0 0.201107 0.989015 0.76305 7.57753e+07 0.00787639 1.66681e+07 1.10382e+07 1.67361e+07 135 1.67897e+07 1.55533e+07 0.00784896 1.6742e+07 49.9288 0.000769673 0.990549 0 50.1018 GTEX-1J1OQ-1726-SM-CL55N 1 B1 2 pieces, myometrium only 6.8 Uterus Uterus 0000995 1287 1348 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990586 341692 0.976416 0.992405 0.783613 23928 1 76 0.0026772 213 0 1.00502e+08 0.0232028 205946 1.01271e+08 1.26106e+07 23967 5.00003e+07 0 0.192803 0.992405 0.777661 1.00502e+08 0.00411244 2.21009e+07 1.07597e+07 2.2238e+07 219 2.22679e+07 1.97146e+07 0.00339351 2.22592e+07 49.9903 0.0020336 0.994224 0 50.1546 GTEX-1J1OQ-1826-SM-CL53R 1 B1 6 pieces, squamous epithelium is ~0.15mm, partially sloughed 6.3 Vagina Vagina 0000996 1291 1344 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.988421 342850 0.967952 0.990381 0.720342 24727 1 76 0.00281195 214 0 1.02831e+08 0.0318189 536089 1.0383e+08 1.40499e+07 24770 5.11612e+07 0 0.24761 0.990381 0.713413 1.02831e+08 0.00432817 2.28144e+07 1.3597e+07 2.29667e+07 227 2.29762e+07 1.51746e+07 0.00356856 2.3011e+07 50.0378 0.00516314 0.992341 0 50.1663 GTEX-1J1OQ-2026-SM-CMKHZ 1 B1 6 pieces, minimal atherosis 6.3 Blood Vessel Artery - Aorta 0001496 1300 1335 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.992404 306554 0.971839 0.993435 0.755256 23182 1 76 0.00232028 169 0 8.86489e+07 0.0278296 175494 8.92347e+07 6.65487e+06 23227 4.41386e+07 0 0.216583 0.993435 0.750298 8.86489e+07 0.00317175 1.93223e+07 7.8506e+06 1.9365e+07 196 1.93757e+07 1.52966e+07 0.00274557 1.94053e+07 50.0382 0.00196666 0.994466 0 50.0552 GTEX-1J1OQ-2226-SM-A96SS 1 B1 2 pieces, no abnormalities 7.2 Heart Heart - Atrial Appendage 0006631 1304 1331 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993813 258295 0.981809 0.995235 0.82754 20626 1 76 0.00187407 266 0 8.54677e+07 0.0180083 2.15936e+06 8.58769e+07 2.68436e+06 20640 4.26032e+07 0 0.15427 0.995235 0.823597 8.54677e+07 0.00236076 1.81936e+07 1.21918e+07 1.82356e+07 260 1.82795e+07 1.28452e+07 0.00211707 1.82441e+07 49.9515 0.0251449 0.996658 0 50.0577 GTEX-1J1OQ-2326-SM-A96ST 1 B1 6 pieces, confirmed target muscularis 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1311 1324 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845,LCSET-7961 10/06/2015 TruSeq.v1 RNASEQ 0.990859 511927 0.972694 0.991798 0.798413 25065 1 76 0.00258571 382 0 1.629e+08 0.0270354 1.77947e+06 1.64248e+08 9.93771e+06 25117 8.11893e+07 0 0.174281 0.991798 0.791864 1.629e+08 0.00304921 3.54912e+07 1.69975e+07 3.61585e+07 359 3.60825e+07 2.42651e+07 0.00281724 3.57186e+07 49.7466 0.0108341 0.992736 0 50.4657 GTEX-1J1OQ-2426-SM-CY8HG 1 B1 6 pieces, confirmed target musculairs 6.8 Esophagus Esophagus - Muscularis 0004648 1314 1321 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988817 493144 0.972743 0.990891 0.785494 22581 1 76 0.00489188 145 0 7.72751e+07 0.0270339 511005 7.79855e+07 9.63935e+06 22611 3.84265e+07 0 0.187249 0.990891 0.778339 7.72751e+07 0.00755825 1.6658e+07 7.07698e+06 1.68608e+07 157 1.68596e+07 1.28454e+07 0.00622227 1.68141e+07 49.9324 0.00655257 0.992964 0 50.3025 GTEX-1J1OQ-2526-SM-AHZ3Q 1 B1 6 pieces, squamous mucosa up to ~0.3mm, 20-40% of thickness 7.5 Esophagus Esophagus - Mucosa 0006920 1316 1319 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988755 346279 0.968598 0.990192 0.77492 22862 1 76 0.00684826 131 0 7.67893e+07 0.0311395 390015 7.75499e+07 1.33858e+07 22884 3.82182e+07 0 0.193678 0.990192 0.767319 7.67893e+07 0.00886453 1.70205e+07 1.33552e+07 1.72335e+07 146 1.72054e+07 1.26223e+07 0.00785493 1.71611e+07 49.9355 0.00502922 0.991629 0 50.311 GTEX-1J1OQ-2726-SM-AHZ3R 3 B1 6 pieces, mucoa up to ~0.25mm, glandular elements completely autolyzed, partially sloughing 6.8 Colon Colon - Transverse 0001157 1324 1311 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98774 358773 0.974082 0.989099 0.812719 25240 1 76 0.00714698 211 0 1.02304e+08 0.0239621 267592 1.03431e+08 1.7561e+07 25274 5.08135e+07 0 0.161363 0.989099 0.803859 1.02304e+08 0.00881637 2.24449e+07 1.25055e+07 2.26156e+07 212 2.26046e+07 1.85484e+07 0.00798053 2.2589e+07 49.9828 0.00258714 0.990458 0 50.1895 GTEX-1J1OQ-2826-SM-D3L88 1 B1 6 pieces, confirmed target muscularis 6.9 Colon Colon - Sigmoid 0001159 1327 1308 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991627 328115 0.978062 0.993619 0.804616 22589 1 76 0.00270352 164 0 7.83551e+07 0.0216157 377766 7.88583e+07 8.51682e+06 22615 3.89907e+07 0 0.173446 0.993619 0.799482 7.83551e+07 0.00373475 1.70113e+07 6.66364e+06 1.71482e+07 171 1.7167e+07 1.46315e+07 0.0032181 1.71436e+07 49.9659 0.00479044 0.995612 0 50.2004 GTEX-1J1OQ-3026-SM-C1YSF 1 B1 1 piece, adenohypophysis, trace dura, (delineated) 6.6 Pituitary Pituitary 0000007 1367 1268 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.989435 638607 0.960263 0.992371 0.751174 24919 1 76 0.00233404 166 0 8.98155e+07 0.0394386 139189 9.05059e+07 8.20773e+06 24957 4.46543e+07 0 0.209089 0.992371 0.745443 8.98155e+07 0.00364903 1.93601e+07 1.53195e+07 1.95133e+07 185 1.96109e+07 1.52725e+07 0.00298959 1.95093e+07 49.8701 0.0015379 0.995308 0 50.197 GTEX-1J1OQ-3126-SM-D4P2O 1 B1 4 pieces, no abnormalities, adherent fragment of arachnoid/dura, delineated 7 Brain Brain - Cerebellum 0002037 1371 1264 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991682 506402 0.943357 0.993105 0.703147 23873 1 76 0.00285833 159 0 8.58828e+07 0.0563254 993871 8.6479e+07 1.14476e+07 23909 4.27389e+07 0 0.24021 0.993105 0.698299 8.58828e+07 0.00390552 1.84535e+07 1.52896e+07 1.86626e+07 195 1.86819e+07 9.90466e+06 0.00338117 1.85489e+07 49.8214 0.0114926 0.994528 0 50.2818 GTEX-1J1OQ-3226-SM-A9G2Q 1 B1 4 pieces, no abnormalities, adherent fragment of arachnoid/dura, delineated 6.8 Brain Brain - Cortex 0001870 1373 1262 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.987373 414654 0.958696 0.991776 0.810887 24611 1 76 0.00389039 268 0 8.51201e+07 0.0409877 3.58332e+06 8.58259e+07 7.56566e+06 24630 4.22826e+07 0 0.147809 0.991776 0.804218 8.51201e+07 0.00429117 1.84299e+07 1.78318e+07 1.88189e+07 259 1.88342e+07 1.0024e+07 0.00408728 1.87344e+07 49.8672 0.041751 0.996178 0 50.5221 GTEX-1J1R8-0003-SM-G8OXS B1 Blood Whole Blood 0013756 -165 BP-59918 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J1R8-0126-SM-CJI36 0 B1 2 pieces, no abnormalities 5.6 Thyroid Thyroid 0002046 328 772 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992455 714841 0.964431 0.993663 0.733431 23624 1 76 0.00212377 140 0 7.25624e+07 0.035321 495683 7.30251e+07 4.35092e+06 23669 3.61328e+07 0 0.231 0.993663 0.728783 7.25624e+07 0.00271448 1.58275e+07 7.49517e+06 1.59405e+07 161 1.60063e+07 1.03608e+07 0.00241876 1.58374e+07 49.7347 0.00678784 0.994871 0 50.1779 GTEX-1J1R8-0226-SM-AHZ3C 1 B1 2 pieces, moderate congestion 8.2 Lung Lung 0008952 335 765 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988769 230110 0.972281 0.989956 0.770138 24419 1 76 0.00698532 140 0 8.36057e+07 0.0273937 619440 8.4454e+07 1.4268e+07 24455 4.16215e+07 0 0.202143 0.989956 0.762403 8.36057e+07 0.00806076 1.85337e+07 8.19699e+06 1.87289e+07 162 1.8689e+07 1.32064e+07 0.0075224 1.86649e+07 49.9677 0.00733464 0.991143 0 50.262 GTEX-1J1R8-0326-SM-AHZ3D 1 B1 6 pieces, squamous mucosa up ot ~0.4mm, ~30-50% of thickness. Submucosal mucus gland delineated 9.7 Esophagus Esophagus - Mucosa 0006920 345 755 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987653 311511 0.976939 0.988836 0.823414 22876 1 76 0.00707889 221 0 1.02715e+08 0.0224315 625651 1.03874e+08 1.94636e+07 22899 5.11261e+07 0 0.153525 0.988836 0.814222 1.02715e+08 0.0083881 2.32695e+07 1.82068e+07 2.34841e+07 220 2.3444e+07 2.00898e+07 0.00773271 2.34274e+07 49.9823 0.00602316 0.99002 0 50.2295 GTEX-1J1R8-0426-SM-A96SZ 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 350 750 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993938 290134 0.976965 0.995193 0.832489 22322 1 76 0.00188047 213 0 8.00236e+07 0.0227085 657318 8.04101e+07 2.7291e+06 22344 3.98889e+07 0 0.144476 0.995193 0.828487 8.00236e+07 0.00218807 1.73979e+07 6.67686e+06 1.75772e+07 236 1.75484e+07 1.4552e+07 0.00203408 1.75205e+07 49.9603 0.00817457 0.996447 0 50.2563 GTEX-1J1R8-0526-SM-ACKWO 0 B1 2 pieces, trace fascia present 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 355 745 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992474 284067 0.975928 0.994195 0.820767 23687 1 76 0.00292978 278 0 1.09751e+08 0.023858 1.33035e+06 1.10392e+08 1.46211e+07 23714 5.46718e+07 0 0.155162 0.994195 0.816002 1.09751e+08 0.00378136 2.40655e+07 1.4597e+07 2.4282e+07 303 2.42502e+07 1.69969e+07 0.00335483 2.42631e+07 50.0133 0.0120511 0.995915 0 50.2239 GTEX-1J1R8-0726-SM-A8N92 1 B1 2 pieces, hyperplastic glandular pattern. Mulitple glands with urothelial metaplasia, rep delineated 6.7 Prostate Prostate 0002367 360 740 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984593 286118 0.962305 0.987372 0.707725 25914 1 76 0.0108742 134 0 8.0226e+07 0.0374966 510204 8.1252e+07 1.43227e+07 25960 3.98482e+07 0 0.254579 0.987372 0.698788 8.0226e+07 0.0115357 1.75024e+07 9.42757e+06 1.77356e+07 143 1.77815e+07 1.04644e+07 0.011204 1.76764e+07 49.8518 0.00627928 0.990151 0 50.331 GTEX-1J1R8-0826-SM-ACKWP 1 B1 6 pieces, atherosis layer up to ~0.2mm 7.9 Blood Vessel Artery - Aorta 0001496 365 735 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.993275 275466 0.972524 0.994637 0.817108 22950 1 76 0.00276999 280 0 1.03307e+08 0.0271052 380878 1.03864e+08 1.37706e+07 22979 5.14616e+07 0 0.155416 0.994637 0.812726 1.03307e+08 0.00357041 2.22817e+07 8.53926e+06 2.25041e+07 276 2.24865e+07 1.85179e+07 0.00316965 2.243e+07 49.9371 0.00366709 0.996 0 50.2483 GTEX-1J1R8-0926-SM-A8N93 1 B1 2 pieces, well preserved islets visible; rep encircled. ~20% interstitial fat, delineated 8 Pancreas Pancreas 0001150 370 730 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.98708 350781 0.975202 0.989032 0.821892 23987 1 76 0.0110743 128 0 1.0066e+08 0.0245151 311559 1.01776e+08 1.82647e+07 24012 5.00566e+07 0 0.15331 0.989032 0.812877 1.0066e+08 0.010494 2.28393e+07 2.49831e+07 2.30441e+07 140 2.30991e+07 2.68002e+07 0.0107847 2.29851e+07 49.8763 0.00306122 0.990984 0 50.2232 GTEX-1J1R8-1026-SM-CJI37 1 B1 6 pieces, confirmed target muscularis 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 375 725 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993228 1.1135e+06 0.976623 0.994348 0.822983 23537 1 76 0.00197649 392 0 1.20099e+08 0.0230648 1.31843e+06 1.20782e+08 7.17419e+06 23565 5.98198e+07 0 0.15364 0.994348 0.818332 1.20099e+08 0.00255164 2.60166e+07 1.17567e+07 2.63417e+07 344 2.64032e+07 2.13135e+07 0.00226374 2.60726e+07 49.685 0.0109158 0.995467 0 50.3104 GTEX-1J1R8-1126-SM-CNPQ3 1 B1 3 pieces, fragmented. Well preserved mucosa up to ~0.4mm 6.7 Colon Colon - Transverse 0001157 378 722 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98542 432749 0.972078 0.988214 0.799599 25369 1 76 0.00575183 286 0 1.27838e+08 0.0269076 2.4476e+06 1.29363e+08 3.05643e+07 25414 6.35345e+07 0 0.172479 0.988214 0.790175 1.27838e+08 0.00865546 2.82908e+07 2.57736e+07 2.85641e+07 317 2.86145e+07 1.77965e+07 0.00719954 2.85513e+07 49.9448 0.0189204 0.991008 0 50.2403 GTEX-1J1R8-1326-SM-CE6TC 1 B1 2 pieces, spermatogenesis present; appears reduced 6.9 Testis Testis 0000473 383 717 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98708 591698 0.927455 0.988682 0.711225 33100 1 76 0.00785733 138 0 7.64196e+07 0.0722518 890840 7.72944e+07 1.2296e+07 33169 3.80036e+07 0 0.216231 0.988682 0.703175 7.64196e+07 0.00774784 1.58923e+07 1.03112e+07 1.59368e+07 128 1.60631e+07 1.20998e+07 0.00780268 1.58731e+07 49.7024 0.0115253 0.990284 0 50.0699 GTEX-1J1R8-1426-SM-CL55O 1 B1 6 pieces, confirmed target muscularis 7.4 Colon Colon - Sigmoid 0001159 382 718 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992358 540564 0.975646 0.994117 0.805242 24896 1 76 0.00254375 380 0 1.19956e+08 0.0240742 983484 1.20666e+08 1.59011e+07 24936 5.97316e+07 0 0.170404 0.994117 0.800505 1.19956e+08 0.00411863 2.62441e+07 1.03502e+07 2.64734e+07 380 2.65063e+07 1.99297e+07 0.0033298 2.6412e+07 49.9109 0.00815047 0.995876 0 50.2174 GTEX-1J1R8-1726-SM-ARL8M 1 B1 6 pieces, adherent dermal fat up to ~1.5mm; squamous epithelium is ~40-50 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 415 685 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.992308 621692 0.968711 0.992552 0.77571 23561 1 76 0.00185849 175 0 6.8499e+07 0.0310681 544798 6.90129e+07 4.11166e+06 23591 3.40593e+07 0 0.193001 0.992552 0.769933 6.8499e+07 0.00247807 1.49252e+07 8.25319e+06 1.504e+07 164 1.51892e+07 1.1039e+07 0.0021682 1.4796e+07 49.3444 0.00789414 0.992797 0 50.1916 GTEX-1J1R8-1826-SM-AHZ3B 1 B1 3 pieces, ~50% glandular elements, delineated; rest is stroma; squamous mucosa 8 Salivary Gland Minor Salivary Gland 0006330 415 685 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988478 254306 0.96551 0.990013 0.721338 24878 1 76 0.00682597 125 0 7.15366e+07 0.0341493 356943 7.22582e+07 1.25945e+07 24912 3.55941e+07 0 0.244172 0.990013 0.714134 7.15366e+07 0.00845365 1.5723e+07 7.76382e+06 1.58649e+07 130 1.58556e+07 1.02526e+07 0.00763855 1.58347e+07 49.967 0.00493983 0.991548 0 50.2247 GTEX-1J1R8-1926-SM-CM2RV 0 B1 2 pieces, minimal adherent fat 6.4 Nerve Nerve - Tibial 0001323 415 685 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992939 271758 0.96535 0.994144 0.729574 24342 1 76 0.0020799 177 0 8.46267e+07 0.0344128 463533 8.51252e+07 5.24492e+06 24391 4.21476e+07 0 0.235776 0.994144 0.725301 8.46267e+07 0.00296511 1.86245e+07 6.96831e+06 1.86882e+07 201 1.87002e+07 1.18396e+07 0.00252197 1.871e+07 50.0131 0.00544531 0.995348 0 50.0854 GTEX-1J1R8-2026-SM-CL53Y 0 B1 6 pieces, adherent dermal fat up to ~2mm, rep delineated; squamous epithelium is ~35-45 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 418 682 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991497 501048 0.970187 0.993139 0.782234 25104 1 76 0.00266201 390 0 1.13643e+08 0.029628 1.53012e+06 1.14428e+08 1.50411e+07 25154 5.6571e+07 0 0.187953 0.993139 0.776867 1.13643e+08 0.00387641 2.4846e+07 1.35022e+07 2.52166e+07 368 2.5269e+07 1.66104e+07 0.00326821 2.49702e+07 49.7026 0.0133719 0.994781 0 50.3701 GTEX-1J1R8-2126-SM-ARL8N 0 B1 2 pieces, no significant atherosis or adherent fat 8.3 Blood Vessel Artery - Tibial 0007610 422 678 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992863 692381 0.97258 0.993019 0.815018 20184 1 76 0.00176063 130 0 5.65174e+07 0.0270359 243474 5.69148e+07 3.65739e+06 20197 2.80933e+07 0 0.157562 0.993019 0.809329 5.65174e+07 0.00237191 1.21936e+07 4.28757e+06 1.22244e+07 137 1.24014e+07 1.01646e+07 0.00206622 1.20292e+07 49.2381 0.00427787 0.993175 0 50.0631 GTEX-1J1R8-2226-SM-ARZMP 0 B1 2 pieces, ~10% fascia/vascular elements, rep delineated 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 426 674 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989275 560638 0.974974 0.991535 0.807273 21882 1 76 0.00245438 142 0 6.48389e+07 0.0247406 383396 6.53925e+07 2.6713e+06 21906 3.22012e+07 0 0.167701 0.991535 0.800439 6.48389e+07 0.00349459 1.41768e+07 6.76538e+06 1.43473e+07 149 1.44612e+07 1.18495e+07 0.0029733 1.4198e+07 49.5408 0.005863 0.993794 0 50.2987 GTEX-1J1R8-2326-SM-CKZPS 0 B1 2 pieces, 5-10% interstitial fat/vascular elements 7.9 Muscle Muscle - Skeletal 0011907 428 672 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991095 551132 0.984763 0.993351 0.878667 19984 1 76 0.00190498 378 0 1.19394e+08 0.0150199 2.36722e+06 1.20193e+08 1.14526e+07 19999 5.946e+07 0 0.106096 0.993351 0.872825 1.19394e+08 0.00328935 2.61395e+07 1.64538e+07 2.65259e+07 338 2.64914e+07 2.15004e+07 0.00259559 2.63932e+07 49.9071 0.0196952 0.995608 0 50.3668 GTEX-1J8EW-0003-SM-G8OX9 B1 Blood Whole Blood 0013756 1040 BP-59918 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J8EW-0006-SM-CNNOW B1 8.4 Blood Whole Blood 0013756 1040 BP-59919 RNA isolation_PAXgene Blood RNA (Manual) 01/23/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.981223 314746 0.980267 0.983055 0.771876 20935 1 76 0.00260784 201 0 1.06355e+08 0.0190696 212799 1.08188e+08 1.2003e+07 20961 5.29447e+07 0 0.208392 0.983055 0.758796 1.06355e+08 0.00369104 2.44551e+07 8.75194e+07 2.44879e+07 223 2.45764e+07 2.3767e+07 0.00314843 2.45605e+07 49.9839 0.00196693 0.984887 0 50.0335 GTEX-1J8EW-0011-R11a-SM-AHZ37 B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 1044 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987856 661809 0.951451 0.989364 0.753719 25696 1 76 0.00701379 271 0 1.31277e+08 0.0480909 2.81507e+06 1.32688e+08 2.43113e+07 25737 6.5291e+07 0 0.197732 0.989364 0.745702 1.31277e+08 0.00819987 2.8364e+07 2.15525e+07 2.8598e+07 322 2.86111e+07 1.51985e+07 0.00760593 2.852e+07 49.9203 0.0212156 0.990871 0 50.2054 GTEX-1J8EW-0011-R3a-SM-ARU8A B1, A1 5.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1044 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992205 308983 0.975114 0.993724 0.848526 21198 1 76 0.0019345 367 0 8.60922e+07 0.0247353 9.19300e+06 8.66359e+07 2.86906e+06 21208 4.2904e+07 0 0.126588 0.993724 0.8432 8.60922e+07 0.00276636 1.85886e+07 2.99025e+07 1.9376e+07 345 1.90192e+07 5.09939e+06 0.0023498 1.90129e+07 49.9916 0.106111 0.995242 0 51.037 GTEX-1J8EW-0011-R4b-SM-ARU89 B1, A1 5.6 Brain Brain - Amygdala 0001876 1044 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.994155 273940 0.973521 0.995432 0.855442 20695 1 76 0.00191117 266 0 7.19141e+07 0.0263389 7.92177e+06 7.22441e+07 2.28478e+06 20706 3.58553e+07 0 0.118079 0.995432 0.851534 7.19141e+07 0.00253029 1.56928e+07 2.09014e+07 1.62046e+07 304 1.59628e+07 4.5554e+06 0.00222033 1.59926e+07 50.0466 0.109653 0.996708 0 50.8022 GTEX-1J8EW-0011-R5b-SM-ARU8B B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 1044 BP-67345 RNA isolation_PAXgene Tissue miRNA 09/21/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992487 500024 0.970982 0.993838 0.839367 21254 1 76 0.00197471 369 0 9.39543e+07 0.0288609 8.85334e+06 9.45369e+07 3.07602e+06 21264 4.68317e+07 0 0.131614 0.993838 0.834195 9.39543e+07 0.00252896 2.00388e+07 3.99511e+07 2.09564e+07 333 2.05977e+07 6.30159e+06 0.00225146 2.04841e+07 49.8618 0.0936496 0.995188 0 51.1192 GTEX-1J8EW-0011-R9b-SM-D4P2F B1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 1044 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992738 460790 0.96041 0.994403 0.836951 22845 1 76 0.0025806 386 0 9.88371e+07 0.0393511 6.41145e+06 9.93934e+07 1.1907e+07 22864 4.92352e+07 0 0.123459 0.994403 0.832266 9.88371e+07 0.00389702 2.15113e+07 1.50992e+07 2.25277e+07 367 2.21126e+07 9.64099e+06 0.00323771 2.2057e+07 49.937 0.0645058 0.996068 0 51.154 GTEX-1J8EW-0126-SM-CJI4F 0 B1 6 pieces; well trimmed; 1 piece with a large, 2mmx0.25mm, artery on the deep aspect [arrowed] 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1081 927 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992596 525793 0.97284 0.993567 0.820835 23359 1 76 0.00207085 202 0 7.7316e+07 0.0268705 432386 7.78166e+07 4.71984e+06 23384 3.85167e+07 0 0.152005 0.993567 0.815555 7.7316e+07 0.00246611 1.68225e+07 7.84049e+06 1.69716e+07 194 1.6992e+07 1.34258e+07 0.00226829 1.68745e+07 49.8266 0.00555648 0.994539 0 50.2206 GTEX-1J8EW-0226-SM-CYPSW 0 B1 2 pieces; 1 has 10% fibrovascular content 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1084 924 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994573 190767 0.973574 0.995349 0.805724 23187 1 76 0.00223455 172 0 7.73123e+07 0.0261092 481039 7.76735e+07 5.28992e+06 23218 3.85493e+07 0 0.167849 0.995349 0.801977 7.73123e+07 0.00285605 1.70868e+07 6.82537e+06 1.72313e+07 191 1.71979e+07 1.31045e+07 0.00254506 1.71778e+07 49.9708 0.00619309 0.996126 0 50.2106 GTEX-1J8EW-0326-SM-CYPSX 1 B1 2 pieces; 1 with 10% tendon; other with 40% fatty vascular and neural internal elements and a 0.6mm tendon 7.7 Muscle Muscle - Skeletal 0011907 1087 921 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995434 210995 0.975916 0.996231 0.834177 21700 1 76 0.0019424 153 0 7.15929e+07 0.0238655 853064 7.18637e+07 4.96026e+06 21719 3.57109e+07 0 0.141739 0.996231 0.831033 7.15929e+07 0.00260276 1.55762e+07 6.38503e+06 1.56977e+07 170 1.56581e+07 1.3418e+07 0.00227231 1.56641e+07 50.0096 0.0118706 0.997029 0 50.1943 GTEX-1J8EW-0426-SM-CYPSY 0 B1 2 pieces; 1 with 20% internal fat 7.1 Nerve Nerve - Tibial 0001323 1090 918 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994512 180115 0.962748 0.995192 0.734895 23704 1 76 0.00225279 149 0 6.90787e+07 0.0369832 378178 6.94125e+07 4.76954e+06 23736 3.44373e+07 0 0.227853 0.995192 0.731361 6.90787e+07 0.00289183 1.51647e+07 6.49038e+06 1.52436e+07 158 1.51869e+07 9.69388e+06 0.00257209 1.52663e+07 50.1303 0.00544827 0.995871 0 50.1297 GTEX-1J8EW-0526-SM-CYPRE 1 B1 2 pieces; well trimmed, minimal plaque 6.2 Blood Vessel Artery - Tibial 0007610 1092 916 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994244 194518 0.969669 0.994877 0.781626 21810 1 76 0.0022574 163 0 7.55409e+07 0.0300156 484030 7.59299e+07 5.20452e+06 21838 3.76457e+07 0 0.188043 0.994877 0.777621 7.55409e+07 0.00285553 1.62861e+07 5.76244e+06 1.64147e+07 180 1.63446e+07 1.20191e+07 0.00255627 1.64039e+07 50.0905 0.0063747 0.995509 0 50.1966 GTEX-1J8EW-0626-SM-CM2TY 1 B1 2 pieces; 30% fibrofatty content in 1 piece 6.6 Heart Heart - Atrial Appendage 0006631 1107 901 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.99299 380263 0.968878 0.994456 0.768327 23448 1 76 0.00206152 199 0 8.91337e+07 0.0308516 2.23395e+06 8.96305e+07 5.65605e+06 23479 4.43871e+07 0 0.200551 0.994456 0.764068 8.91337e+07 0.0029816 1.94798e+07 1.33588e+07 1.97004e+07 254 1.96498e+07 1.15126e+07 0.00252088 1.96444e+07 49.9931 0.024924 0.995923 0 50.2815 GTEX-1J8EW-0926-SM-A9G33 1 B1 2 pieces; no lesions; <2% internal fat; 5% and 10% external fat 7.7 Heart Heart - Left Ventricle 0006566 1120 888 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.984196 229246 0.978269 0.990552 0.826435 21793 1 76 0.00358072 152 0 7.57566e+07 0.0215043 2.22987e+06 7.64792e+07 6.56252e+06 21819 3.75661e+07 0 0.151835 0.990552 0.818627 7.57566e+07 0.00418015 1.65982e+07 8.3501e+06 1.67768e+07 172 1.7004e+07 1.27507e+07 0.00387461 1.67929e+07 49.6876 0.0291565 0.996908 0 50.2675 GTEX-1J8EW-1026-SM-A96T7 1 B1 2 pieces; moderate vascular congestion, patchy alveolar hemorrhage and emphysema, foci of early bronchopneumonia 6.1 Lung Lung 0008952 1122 886 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.98925 191102 0.971624 0.990985 0.807455 23643 1 76 0.0022233 163 0 7.12902e+07 0.0277261 410106 7.19388e+07 2.4967e+06 23667 3.54953e+07 0 0.164169 0.990985 0.800176 7.12902e+07 0.00289979 1.5714e+07 8.43306e+06 1.59716e+07 185 1.59173e+07 1.09703e+07 0.00256095 1.5885e+07 49.9492 0.00570076 0.99272 0 50.4065 GTEX-1J8EW-1126-SM-A96T8 1 B1 2 pieces; well dissected; no lesions 6 Thyroid Thyroid 0002046 1127 881 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.990968 266907 0.965374 0.992496 0.687568 24812 1 76 0.0023135 156 0 7.7596e+07 0.0342742 291083 7.81826e+07 2.74729e+06 24851 3.86453e+07 0 0.277806 0.992496 0.682409 7.7596e+07 0.0026565 1.70217e+07 7.91677e+06 1.71658e+07 167 1.71942e+07 9.99611e+06 0.00248474 1.7104e+07 49.8686 0.00372312 0.994024 0 50.2107 GTEX-1J8EW-1226-SM-A9G34 1 B1 6 pieces; well dissected muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 1129 879 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846,LCSET-8173 11/17/2015 TruSeq.v1 RNASEQ 0.984003 245676 0.965059 0.989617 0.742502 24056 1 76 0.00324533 159 0 8.05117e+07 0.0347549 1.2727e+06 8.13564e+07 5.98959e+06 24089 3.99223e+07 0 0.222557 0.989617 0.734793 8.05117e+07 0.00418119 1.72968e+07 7.81935e+06 1.7517e+07 189 1.7634e+07 9.34993e+06 0.00370644 1.75902e+07 49.9378 0.0156435 0.99523 0 50.3162 GTEX-1J8EW-1326-SM-AHZ3S 1 B1 6 pieces; venous congestion 7.2 Esophagus Esophagus - Mucosa 0006920 1130 878 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988643 345729 0.970933 0.989998 0.785647 23788 1 76 0.00686864 161 0 9.62527e+07 0.028686 688915 9.72252e+07 1.71296e+07 23816 4.79084e+07 0 0.185287 0.989998 0.777788 9.62527e+07 0.00872889 2.14976e+07 1.47533e+07 2.17662e+07 200 2.17361e+07 1.46617e+07 0.00779749 2.16581e+07 49.9101 0.00708577 0.991352 0 50.3104 GTEX-1J8EW-1526-SM-CMKFZ 0 B1 2 pieces; low fibrous content: <2% 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1135 873 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994147 239316 0.976329 0.994982 0.817512 23953 1 76 0.00216895 377 0 1.11005e+08 0.0233537 1.1602e+06 1.11565e+08 7.9934e+06 23977 5.53301e+07 0 0.158818 0.994982 0.81341 1.11005e+08 0.00280253 2.4419e+07 1.22791e+07 2.48519e+07 353 2.48183e+07 1.68863e+07 0.00248547 2.45438e+07 49.7219 0.0103993 0.995818 0 50.4393 GTEX-1J8EW-1626-SM-C1YQ8 1 B1 2 pieces; mild vascular congestion 6.1 Liver Liver 0001114 1136 872 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105,LCSET-9328 06/16/2016 TruSeq.v1 RNASEQ 0.989307 422625 0.966914 0.991807 0.7588 21958 1 76 0.00242406 195 0 8.50772e+07 0.0329708 1.54839e+06 8.578e+07 7.96193e+06 21989 4.23334e+07 0 0.208114 0.991807 0.752583 8.50772e+07 0.00345406 1.85319e+07 1.41103e+07 1.86743e+07 253 1.86729e+07 9.289e+06 0.00293776 1.87169e+07 50.0589 0.0180507 0.994308 0 50.1913 GTEX-1J8EW-1826-SM-C1YQW 1 B1 2 pieces; high fat content: 40% & 60% 6 Adrenal Gland Adrenal Gland 0002369 1143 865 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990867 526187 0.961586 0.993058 0.779475 23587 1 76 0.00188277 268 0 8.19218e+07 0.0381657 2.7127e+06 8.24945e+07 3.89857e+06 23613 4.07757e+07 0 0.182111 0.993058 0.774063 8.19218e+07 0.00234542 1.76155e+07 1.51611e+07 1.78213e+07 257 1.78118e+07 9.32326e+06 0.00211359 1.77875e+07 49.9658 0.0328834 0.995248 0 50.2903 GTEX-1J8EW-1926-SM-CGQGR 1 B1 2 pieces; PANin 1; numerous islets, especially in 1 piece; high fat content: 30 & 20 % 5.7 Pancreas Pancreas 0001150 1142 866 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991387 839196 0.973172 0.993433 0.811626 23549 1 76 0.00367299 198 0 1.71644e+08 0.0261582 667616 1.72779e+08 1.26776e+07 23592 8.544e+07 0 0.161547 0.993433 0.806296 1.71644e+08 0.00387789 3.93065e+07 7.15676e+07 3.98667e+07 209 3.96566e+07 5.02967e+07 0.00376977 3.98355e+07 50.1125 0.003864 0.995478 0 50.3538 GTEX-1J8EW-2226-SM-AHZ3T 2 B1 6 pieces; mucosa moderately autolyzed; muscularis intact 6.1 Stomach Stomach 0000945 1149 859 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98196 200966 0.978021 0.983833 0.8164 23882 1 76 0.00660929 272 0 8.78836e+07 0.0215244 1.07839e+06 8.93278e+07 1.57659e+07 23913 4.37079e+07 0 0.161621 0.983833 0.803201 8.78836e+07 0.00927196 1.97658e+07 6.83797e+07 2.00864e+07 208 2.00436e+07 1.79635e+07 0.00793809 1.99653e+07 49.9021 0.0120723 0.985705 0 50.4022 GTEX-1J8EW-2426-SM-CE6T5 1 B1 6 pieces; muscularis well sampled; 1, 1.5mm focus of mucosa [labeled]; fat content up to 30% 5.7 Colon Colon - Sigmoid 0001159 1160 848 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987792 286891 0.971344 0.989424 0.763074 22264 1 76 0.00739543 123 0 6.36082e+07 0.0284775 741192 6.42881e+07 9.10644e+06 22287 3.16364e+07 0 0.20827 0.989424 0.755003 6.36082e+07 0.00786263 1.37719e+07 6.33776e+06 1.38807e+07 134 1.38826e+07 8.0543e+06 0.00762865 1.38673e+07 49.9724 0.0115292 0.991055 0 50.1966 GTEX-1J8EW-2526-SM-CKZO2 1 B1 6 pieces; fat content up to 20% in 4 of 6 6.7 Vagina Vagina 0000996 1163 845 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.99002 312286 0.963516 0.992104 0.697413 24145 1 76 0.00224035 143 0 7.77551e+07 0.0362858 306222 7.83739e+07 7.62818e+06 24187 3.87028e+07 0 0.266104 0.992104 0.691906 7.77551e+07 0.00359601 1.72146e+07 9.60089e+06 1.72579e+07 164 1.73298e+07 1.06341e+07 0.00291676 1.73009e+07 49.9583 0.00390719 0.994187 0 50.0629 GTEX-1J8EW-2626-SM-CL53E 1 B1 2 pieces; ducts and lobules in fibroadipose tissue 6.6 Breast Breast - Mammary Tissue 0008367 1168 840 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.9915 192047 0.969187 0.99292 0.742284 24561 1 76 0.00270622 142 0 7.10531e+07 0.0304328 497829 7.15598e+07 9.05167e+06 24607 3.53757e+07 0 0.226903 0.99292 0.737029 7.10531e+07 0.00378495 1.55824e+07 6.9749e+06 1.57657e+07 160 1.57555e+07 9.94764e+06 0.00324481 1.56862e+07 49.8898 0.00695683 0.994341 0 50.2923 GTEX-1J8EW-2726-SM-CY8HR 1 B1 6 pieces; well trimmed; up to 10% dermal fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1189 819 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990093 284661 0.969529 0.991751 0.777255 23457 1 76 0.00475107 181 0 8.3584e+07 0.0302331 394887 8.42792e+07 9.69787e+06 23499 4.16017e+07 0 0.192275 0.991751 0.770844 8.3584e+07 0.00740642 1.82011e+07 1.13248e+07 1.8326e+07 179 1.83341e+07 1.29348e+07 0.00607653 1.83238e+07 49.986 0.00468546 0.993409 0 50.1711 GTEX-1J8EW-2826-SM-A96T9 1 B1 2 pieces; several glands present; fat comprises 30%; 1mm skin present 7.7 Salivary Gland Minor Salivary Gland 0006330 1185 823 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.991892 267691 0.968263 0.99342 0.768081 25184 1 76 0.00224519 224 0 8.41834e+07 0.0308756 450009 8.4741e+07 2.84884e+06 25230 4.19165e+07 0 0.200182 0.99342 0.763027 8.41834e+07 0.00272407 1.85613e+07 1.05222e+07 1.87746e+07 238 1.87749e+07 1.29751e+07 0.00248426 1.86772e+07 49.8695 0.00531041 0.994947 0 50.2857 GTEX-1J8EW-2926-SM-A8N9A 1 B1 2 pieces 6.3 Brain Brain - Cerebellum 0002037 1227 781 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.983759 353571 0.946841 0.986969 0.751468 23867 1 76 0.0108973 127 0 6.93489e+07 0.0529427 2.19238e+06 7.02645e+07 1.26061e+07 23887 3.4419e+07 0 0.195372 0.986969 0.741676 6.93489e+07 0.0119378 1.47973e+07 1.5505e+07 1.51957e+07 151 1.52081e+07 6.24586e+06 0.0114159 1.49831e+07 49.6274 0.0312018 0.990179 0 50.6641 GTEX-1J8EW-3126-SM-AHZ3U 1 B1 1 piece; 40% stromal content 6.7 Pituitary Pituitary 0000007 1231 777 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98868 453646 0.957011 0.990155 0.741033 26475 1 76 0.00701424 201 0 1.01494e+08 0.042775 623054 1.02503e+08 1.79007e+07 26527 5.04962e+07 0 0.215978 0.990155 0.733738 1.01494e+08 0.00856569 2.125e+07 1.82355e+07 2.16047e+07 206 2.15828e+07 1.36486e+07 0.00778881 2.14138e+07 49.8035 0.00607838 0.991631 0 50.4139 GTEX-1J8JJ-0001-SM-EAZDE B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1034 BP-63049 RNA isolation_Trizol Manual (Cell Pellet) 05/01/2015 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.991478 727758 0.974298 0.992684 0.838581 21553 1 76 0.00210258 285 0 1.07538e+08 0.0249427 329742 1.0833e+08 8.55149e+06 21579 5.3556e+07 0 0.135717 0.992684 0.832446 1.07538e+08 0.00318933 2.40603e+07 1.20214e+07 2.41737e+07 279 2.4191e+07 2.61849e+07 0.0026453 2.41648e+07 49.9729 0.00304385 0.993889 0 50.1177 GTEX-1J8JJ-0004-SM-G8OXF B1 Blood Whole Blood 0013756 1034 BP-59978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J8JJ-0006-SM-CNNOX B1 8.2 Blood Whole Blood 0013756 1034 BP-59979 RNA isolation_PAXgene Blood RNA (Manual) 01/26/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.984287 811889 0.974329 0.986181 0.785646 19576 1 76 0.00248138 198 0 1.1654e+08 0.0246878 219271 1.18173e+08 1.17773e+07 19594 5.80025e+07 0 0.188683 0.986181 0.77479 1.1654e+08 0.00384726 2.73287e+07 1.53943e+08 2.73448e+07 236 2.74148e+07 3.0217e+07 0.00316301 2.75003e+07 50.0779 0.00185551 0.988075 0 50.0148 GTEX-1J8JJ-0011-R5a-SM-D4P2G B1, A1 5.8 Brain Brain - Caudate (basal ganglia) 0001873 1033 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.990926 531623 0.973186 0.992524 0.830679 21332 1 76 0.00290725 371 0 1.27841e+08 0.0267456 1.65148e+07 1.28804e+08 1.69695e+07 21342 6.37304e+07 0 0.142508 0.992524 0.824469 1.27841e+08 0.00403521 2.63642e+07 8.14577e+07 2.87977e+07 391 2.82228e+07 4.9866e+06 0.00347032 2.70239e+07 48.9149 0.128217 0.994122 0 52.2059 GTEX-1J8JJ-0011-R9a-SM-ACKVF B1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1033 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992634 360148 0.949552 0.994312 0.815375 22425 1 76 0.00304475 246 0 7.71179e+07 0.0501626 3.30323e+06 7.7559e+07 1.04677e+07 22438 3.84014e+07 0 0.134177 0.994312 0.810737 7.71179e+07 0.00381966 1.68478e+07 1.26104e+07 1.73006e+07 250 1.70534e+07 8.86103e+06 0.00343155 1.72212e+07 50.2448 0.0425899 0.99599 0 50.6629 GTEX-1J8JJ-0126-SM-D3L93 0 B1 2 pieces, trace interstitial fat, delineated 7.9 Muscle Muscle - Skeletal 0011907 1236 1137 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992988 523458 0.980432 0.994752 0.85993 21913 1 76 0.00240235 273 0 1.31092e+08 0.0193298 1.24973e+06 1.31784e+08 1.34461e+07 21935 6.53089e+07 0 0.120502 0.994752 0.855417 1.31092e+08 0.00320526 2.81241e+07 1.19857e+07 2.85506e+07 328 2.86565e+07 2.82409e+07 0.00280309 2.82182e+07 49.6147 0.00948315 0.996517 0 50.3763 GTEX-1J8JJ-0226-SM-CL53I 0 B1 6 pieces, trace dermal fat (delineated); prominent solar elastosis in dermis (rep foci delineated); squamous epithelium is ~30-40 microns 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1237 1136 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991787 468389 0.973206 0.993273 0.784918 25016 1 76 0.00273315 235 0 1.025e+08 0.0263611 416773 1.03194e+08 1.27972e+07 25067 5.10086e+07 0 0.188289 0.993273 0.779637 1.025e+08 0.00395895 2.22096e+07 1.21189e+07 2.23118e+07 243 2.23869e+07 1.77973e+07 0.00334513 2.22811e+07 49.8815 0.00403873 0.994758 0 50.1147 GTEX-1J8JJ-0326-SM-CMKG6 0 B1 2 pieces, ~30-40% fascia/vascular elements, rep delineated-sample with caution 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1237 1136 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994382 448129 0.961476 0.995279 0.760632 24352 1 76 0.00228537 215 0 8.90781e+07 0.0382383 463265 8.95006e+07 7.03603e+06 24405 4.43982e+07 0 0.200844 0.995279 0.757041 8.90781e+07 0.00275531 1.93269e+07 1.54515e+07 1.95222e+07 218 1.95192e+07 1.40381e+07 0.00252013 1.94115e+07 49.8617 0.00517611 0.996176 0 50.2513 GTEX-1J8JJ-0426-SM-CMKG7 0 B1 2 pieces, no adherent fat; atherosis occludes 30-40% of lumen, delineated 6.8 Blood Vessel Artery - Tibial 0007610 1240 1133 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993617 331619 0.971246 0.994395 0.753382 22982 1 76 0.00244216 197 0 9.06008e+07 0.0284249 382385 9.11115e+07 6.81917e+06 23019 4.51173e+07 0 0.217863 0.994395 0.749159 9.06008e+07 0.00293054 1.96392e+07 7.1182e+06 1.97705e+07 209 1.97613e+07 1.43324e+07 0.00268616 1.97219e+07 49.95 0.00419689 0.995173 0 50.1666 GTEX-1J8JJ-0526-SM-ARL8O 0 B1 2 pieces, trace nubbins of adherent fat up to ~0.5-1mm, delineated 6.1 Nerve Nerve - Tibial 0001323 1242 1131 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991191 731824 0.959625 0.991475 0.660043 23800 1 76 0.00215643 121 0 5.97569e+07 0.040128 171441 6.02707e+07 3.60733e+06 23847 2.96946e+07 0 0.299581 0.991475 0.654417 5.97569e+07 0.00278531 1.31295e+07 6.21891e+06 1.31036e+07 128 1.32903e+07 7.32466e+06 0.00247078 1.29613e+07 49.3733 0.00284452 0.99176 0 49.9506 GTEX-1J8JJ-0626-SM-ARZMQ 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~40 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1243 1130 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989389 654703 0.970883 0.991318 0.731729 24246 1 76 0.00267354 132 0 6.65373e+07 0.0288616 199443 6.712e+07 2.76758e+06 24284 3.30416e+07 0 0.239154 0.991318 0.725376 6.65373e+07 0.00378803 1.47117e+07 8.29523e+06 1.48167e+07 140 1.49771e+07 1.0736e+07 0.0032297 1.46726e+07 49.4867 0.00297144 0.993246 0 50.1777 GTEX-1J8JJ-0726-SM-AHZ3E 1 B1 2 pieces, no abnormalities 7.3 Thyroid Thyroid 0002046 1245 1128 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988017 354104 0.968835 0.989568 0.676467 25729 1 76 0.00689 138 0 9.29517e+07 0.0308419 207639 9.39316e+07 1.60836e+07 25783 4.62335e+07 0 0.292368 0.989568 0.66941 9.29517e+07 0.00853591 2.0487e+07 8.92062e+06 2.05825e+07 156 2.05987e+07 1.28421e+07 0.00771167 2.06101e+07 50.0138 0.00221053 0.991119 0 50.1162 GTEX-1J8JJ-0826-SM-AHZ3F 1 B1 2 pieces, incidental simple serous cysts, rep. delineated. Post menopausal atrophy 7.3 Ovary Ovary 0000992 1248 1125 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987644 295332 0.964689 0.989276 0.769192 23799 1 76 0.00674893 159 0 8.71713e+07 0.0350278 115892 8.81163e+07 1.51217e+07 23835 4.33607e+07 0 0.195497 0.989276 0.760943 8.71713e+07 0.00879538 1.89405e+07 1.16581e+07 1.91322e+07 157 1.90911e+07 1.70022e+07 0.00777047 1.91218e+07 50.0402 0.00131522 0.990908 0 50.2517 GTEX-1J8JJ-0926-SM-ARZMR 1 B1 6 pieces, atherosis layer up to ~1mm, focally calcifying (delineated) 6.1 Blood Vessel Artery - Aorta 0001496 1252 1121 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.98688 414218 0.968969 0.988617 0.711264 21900 1 76 0.00287762 124 0 6.52229e+07 0.0306448 207314 6.59739e+07 2.99705e+06 21938 3.23512e+07 0 0.257705 0.988617 0.703168 6.52229e+07 0.00408121 1.39519e+07 6.39421e+06 1.42611e+07 133 1.43462e+07 9.96539e+06 0.00347836 1.39754e+07 49.3453 0.00314236 0.990355 0 50.5479 GTEX-1J8JJ-1126-SM-CL55P 1 B1 2 pieces, moderate congestion/edema, atalectasis. Approaching score 2 in some areas 6 Lung Lung 0008952 1262 1111 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.989194 192519 0.974167 0.99092 0.76689 23081 1 76 0.0028852 164 0 8.01556e+07 0.025544 952111 8.08901e+07 1.07912e+07 23109 3.98828e+07 0 0.207277 0.99092 0.759927 8.01556e+07 0.00441584 1.76133e+07 7.63752e+06 1.78055e+07 192 1.77922e+07 1.10925e+07 0.00364919 1.77635e+07 49.9596 0.0117704 0.992646 0 50.2714 GTEX-1J8JJ-1726-SM-C1YQG 3 B1 6 pieces, autolyzed mucosa up to ~1mm, ~30% of thickness, glandular mucosa largely degraded 6.1 Stomach Stomach 0000945 1274 1099 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.972874 301286 0.986346 0.975538 0.855395 21743 1 76 0.00185432 432 0 9.11671e+07 0.0131292 928082 9.34531e+07 3.76688e+06 21757 4.5253e+07 0 0.130951 0.975538 0.83447 9.11671e+07 0.00232266 2.14687e+07 1.49137e+08 2.17512e+07 324 2.18826e+07 2.78743e+07 0.00208785 2.15791e+07 49.6508 0.00993099 0.978202 0 50.3268 GTEX-1J8JJ-2426-SM-D4P4A 1 B1 6 pieces, confirmed target muscularis 6 Colon Colon - Sigmoid 0001159 1294 1079 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993256 118557 0.968225 0.994221 0.78784 23320 1 76 0.00272291 201 0 8.18526e+07 0.0315844 1.84636e+06 8.23284e+07 9.90558e+06 23348 4.07788e+07 0 0.180385 0.994221 0.783287 8.18526e+07 0.00355112 1.76948e+07 7.45669e+06 1.8046e+07 231 1.79712e+07 9.63529e+06 0.00313661 1.78497e+07 49.8304 0.0224268 0.995186 0 50.4913 GTEX-1J8Q2-0002-SM-G8OXT B1 Blood Whole Blood 0013756 886 BP-59978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J8Q2-0006-SM-CNNOZ B1 8.6 Blood Whole Blood 0013756 886 BP-59979 RNA isolation_PAXgene Blood RNA (Manual) 01/26/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.984794 1.34196e+06 0.947419 0.987112 0.726647 18400 1 76 0.00258197 105 0 8.35883e+07 0.0518272 116199 8.46797e+07 9.151e+06 18413 4.15652e+07 0 0.220771 0.987112 0.717282 8.35883e+07 0.00437144 1.8801e+07 1.08213e+08 1.88974e+07 130 1.89229e+07 1.80833e+07 0.0034746 1.90134e+07 50.1192 0.00137222 0.98943 0 50.1278 GTEX-1J8Q2-0011-R10b-SM-D4P2C B1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 911 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994078 526048 0.965656 0.995389 0.869673 23537 1 76 0.00255695 374 0 1.11278e+08 0.0340027 5.28538e+06 1.11793e+08 1.31346e+07 23552 5.54557e+07 0 0.0959829 0.995389 0.865663 1.11278e+08 0.00340955 2.41374e+07 1.75838e+07 2.47751e+07 345 2.46621e+07 1.33456e+07 0.00298269 2.43663e+07 49.6984 0.0472781 0.996701 0 50.652 GTEX-1J8Q2-0011-R11a-SM-A9SKI B1, A1 6.1 Brain Brain - Cerebellar Hemisphere 0002037 911 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.988711 322565 0.961622 0.990558 0.802842 22497 1 76 0.00706336 266 0 9.50057e+07 0.0382027 6.13680e+06 9.59113e+07 1.72225e+07 22518 4.72832e+07 0 0.15878 0.990558 0.795262 9.50057e+07 0.00824558 2.02499e+07 2.44806e+07 2.11277e+07 295 2.09368e+07 6.29352e+06 0.00765337 2.0539e+07 49.5204 0.0639842 0.992406 0 51.0607 GTEX-1J8Q2-0011-R1a-SM-D4P2D B1, A1 6 Brain Brain - Hippocampus 0001954 911 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993455 316172 0.969788 0.994895 0.856588 21545 1 76 0.00305902 367 0 9.64899e+07 0.030099 1.56705e+07 9.69849e+07 1.21604e+07 21559 4.80918e+07 0 0.1132 0.994895 0.852215 9.64899e+07 0.00414642 2.07094e+07 3.17253e+07 2.20892e+07 369 2.15993e+07 4.8955e+06 0.00360194 2.12742e+07 49.6208 0.161577 0.996335 0 51.612 GTEX-1J8Q2-0011-R2b-SM-EAZ2X B1, A1 6.5 Brain Brain - Substantia nigra 0002038 911 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986079 315899 0.964683 0.986909 0.848585 23369 1 76 0.00230329 379 0 1.03737e+08 0.0351094 9.48348e+06 1.05113e+08 8.12505e+06 23389 5.17144e+07 0 0.116098 0.986909 0.837476 1.03737e+08 0.0031264 2.28192e+07 1.46103e+07 2.34058e+07 363 2.30399e+07 9.70011e+06 0.0027145 2.32604e+07 50.2381 0.0902215 0.987739 0 50.6346 GTEX-1J8Q2-0011-R3b-SM-ACKVG B1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 911 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.992666 286135 0.967995 0.993917 0.841088 24205 1 76 0.00298619 270 0 1.10207e+08 0.0317048 6.92528e+06 1.10882e+08 1.38521e+07 24229 5.49112e+07 0 0.126907 0.993917 0.835972 1.10207e+08 0.00366157 2.40112e+07 2.29722e+07 2.43481e+07 323 2.42304e+07 1.06133e+07 0.00332345 2.4239e+07 50.0089 0.0624565 0.995168 0 50.3483 GTEX-1J8Q2-0011-R4a-SM-ADEHA B1, A1 6 Brain Brain - Amygdala 0001876 911 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7849 10/20/2015 TruSeq.v1 RNASEQ 0.981448 412193 0.966235 0.98804 0.8486 22005 1 76 0.00388976 270 0 8.28597e+07 0.0335899 1.10978e+07 8.38627e+07 7.95312e+06 22022 4.10339e+07 0 0.117634 0.98804 0.838451 8.28597e+07 0.00386316 1.76212e+07 1.96404e+07 1.89405e+07 317 1.87955e+07 6.52829e+06 0.00387654 1.82082e+07 49.2065 0.132332 0.994631 0 51.8041 GTEX-1J8Q2-0011-R5b-SM-A9SKH B1, A1 7.2 Brain Brain - Caudate (basal ganglia) 0001873 911 BP-65257 RNA isolation_PAXgene Tissue miRNA 07/13/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990374 460535 0.964833 0.991899 0.833693 23874 1 76 0.00660707 267 0 9.68384e+07 0.0348914 5.6714e+06 9.76293e+07 1.67377e+07 23893 4.82276e+07 0 0.13114 0.991899 0.82694 9.68384e+07 0.00812336 2.09553e+07 2.45536e+07 2.14004e+07 287 2.13231e+07 9.91526e+06 0.00736405 2.11384e+07 49.7824 0.0580912 0.993425 0 50.5255 GTEX-1J8Q2-0011-R6a-SM-CKZPG B1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 911 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9108,LCSET-9513 07/27/2016 TruSeq.v1 RNASEQ 0.954991 2.32116e+06 0.962885 0.966234 0.825068 26449 1 76 0.00356529 524 0 1.96117e+08 0.0369083 1.7787e+07 2.0297e+08 1.5365e+07 26482 9.6131e+07 0 0.137817 0.966234 0.797209 1.96117e+08 0.00599824 4.13008e+07 9.9046e+07 4.2378e+07 516 4.27306e+07 2.07565e+07 0.00476761 4.288e+07 50.0873 0.0876335 0.977477 0 50.6437 GTEX-1J8Q2-0011-R7a-SM-CKZPF B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 911 BP-71931 RNA isolation_PAXgene Tissue miRNA 02/18/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992001 403219 0.9649 0.994243 0.852917 22240 1 76 0.0024235 370 0 8.69993e+07 0.0349587 9.96747e+06 8.75031e+07 8.42355e+06 22256 4.33254e+07 0 0.111983 0.994243 0.848006 8.69993e+07 0.0037236 1.86936e+07 2.08151e+07 1.9581e+07 335 1.92665e+07 6.08991e+06 0.00307209 1.91429e+07 49.8391 0.11391 0.996484 0 51.1593 GTEX-1J8Q2-0011-R8b-SM-D4P2E B1, A1 7 Brain Brain - Hypothalamus 0001898 911 BP-77574 RNA isolation_PAXgene Tissue miRNA 08/16/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993834 462012 0.968334 0.995355 0.863003 24465 1 76 0.00265112 377 0 1.28047e+08 0.0313936 6.07688e+06 1.28645e+08 1.61982e+07 24490 6.38119e+07 0 0.105331 0.995355 0.858994 1.28047e+08 0.0037358 2.78589e+07 2.65794e+07 2.8779e+07 363 2.8627e+07 1.38235e+07 0.00319263 2.81666e+07 49.5947 0.0472377 0.996877 0 50.8123 GTEX-1J8Q2-0126-SM-E9J2G 1 B1 2 pieces; skeletal muscle, trivila fat component 8.8 Muscle Muscle - Skeletal 0011907 1087 564 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.99239 523574 0.981565 0.992998 0.869276 21208 1 76 0.00166964 382 0 1.46171e+08 0.0180427 1.38646e+06 1.47201e+08 6.75676e+06 21227 7.28991e+07 0 0.112289 0.992998 0.863189 1.46171e+08 0.00220006 3.12436e+07 1.49011e+07 3.16239e+07 353 3.15855e+07 3.26384e+07 0.00193469 3.13601e+07 49.821 0.00941882 0.993606 0 50.3024 GTEX-1J8Q2-0526-SM-CM2RW 0 B1 6 pieces; well trimmed, epidermis measures 37 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1099 552 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992599 388832 0.970368 0.994203 0.74983 24770 1 76 0.00214335 286 0 1.03011e+08 0.0294264 468300 1.03612e+08 6.25245e+06 24812 5.13008e+07 0 0.220539 0.994203 0.745483 1.03011e+08 0.00274406 2.26272e+07 1.03894e+07 2.27338e+07 276 2.27965e+07 1.62954e+07 0.00244322 2.27216e+07 49.9177 0.00451976 0.995807 0 50.1175 GTEX-1J8Q2-1026-SM-ARU8I 1 B1 2 pieces; 1 includes up to 15% fat 6.3 Heart Heart - Atrial Appendage 0006631 1135 516 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992708 212042 0.974546 0.993925 0.779337 21736 1 76 0.00215952 127 0 6.54503e+07 0.0252489 1.9494e+06 6.58504e+07 2.09071e+06 21755 3.26141e+07 0 0.19521 0.993925 0.774602 6.54503e+07 0.00301948 1.42549e+07 6.02835e+06 1.43711e+07 162 1.43596e+07 8.09172e+06 0.00258897 1.43353e+07 49.9576 0.0296035 0.995142 0 50.203 GTEX-1J8Q2-1226-SM-A9G2W 1 B1 2 pieces; interstitial fibrosis 5.9 Heart Heart - Left Ventricle 0006566 1152 499 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.982526 177851 0.984907 0.989033 0.84721 20522 1 76 0.00415628 264 0 1.0069e+08 0.0150307 6.06139e+06 1.01806e+08 9.32128e+06 20530 4.99525e+07 0 0.137697 0.989033 0.837919 1.0069e+08 0.00470494 2.20933e+07 4.18977e+07 2.20867e+07 316 2.21627e+07 6.13313e+06 0.00442524 2.24565e+07 50.3292 0.0595384 0.995541 0 49.9925 GTEX-1J8Q2-2226-SM-CM2TZ 1 B1 2 pieces; mature fat, central defects 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1203 448 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.988019 219112 0.97593 0.98933 0.777192 22902 1 76 0.00237732 200 0 8.50828e+07 0.0237956 1.13992e+06 8.60004e+07 5.51694e+06 22934 4.23513e+07 0 0.198738 0.98933 0.768899 8.50828e+07 0.0032784 1.88889e+07 1.05904e+07 1.89911e+07 214 1.90248e+07 1.3155e+07 0.00282726 1.89649e+07 49.9211 0.0132548 0.990641 0 50.1349 GTEX-1J8Q2-2626-SM-ACKWQ 1 B1 6 pieces; essentially well trimmed, small attachment of fat, 1 piece 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1237 414 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7848 10/06/2015 TruSeq.v1 RNASEQ 0.991865 122126 0.97453 0.993469 0.761372 22405 1 76 0.00291224 133 0 5.89667e+07 0.0252758 513411 5.93543e+07 7.83432e+06 22430 2.93642e+07 0 0.213158 0.993469 0.756399 5.89667e+07 0.00407838 1.30331e+07 6.53913e+06 1.31532e+07 134 1.31393e+07 8.53038e+06 0.00349437 1.31389e+07 49.9991 0.00864993 0.995073 0 50.2294 GTEX-1J8Q2-2726-SM-A9G2X 1 B1 2 pieces; 70-80% fat, remainder is fibrocollagenous tissue with scattered small ducts/vessels/nerve 6.2 Breast Breast - Mammary Tissue 0008367 1243 408 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.983196 166133 0.973122 0.989364 0.748794 24075 1 76 0.00417128 167 0 7.8421e+07 0.0266229 512484 7.92641e+07 7.44917e+06 24116 3.8877e+07 0 0.224328 0.989364 0.740829 7.8421e+07 0.0042377 1.71431e+07 9.69597e+06 1.75032e+07 170 1.76634e+07 1.08022e+07 0.00420385 1.74218e+07 49.6556 0.00646553 0.995531 0 50.5197 GTEX-1J8Q2-2826-SM-A8N94 2 B1 1 piece; adenohypophysis, neurohypophysis 6.2 Pituitary Pituitary 0000007 1275 376 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.984246 325856 0.957737 0.987291 0.731755 26611 1 76 0.0105948 138 0 8.92793e+07 0.0420196 648236 9.04286e+07 1.50768e+07 26657 4.43336e+07 0 0.225983 0.987291 0.722454 8.92793e+07 0.0119077 1.93224e+07 1.18948e+07 1.95246e+07 164 1.9626e+07 1.16798e+07 0.0112492 1.94874e+07 49.8228 0.00716849 0.990335 0 50.2603 GTEX-1J8Q2-3026-SM-CKZN8 2 B1 4 pieces (fragmented); focus of many corpora amylacea 6.5 Brain Brain - Cortex 0001870 1281 370 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990793 653178 0.959687 0.992978 0.821605 24538 1 76 0.00220083 372 0 9.77e+07 0.0399965 4.19487e+06 9.83909e+07 9.52226e+06 24564 4.8645e+07 0 0.138082 0.992978 0.815836 9.77e+07 0.00352237 2.1199e+07 2.06634e+07 2.16521e+07 332 2.16472e+07 1.09818e+07 0.00286015 2.13894e+07 49.7005 0.0426347 0.995164 0 50.5286 GTEX-1J8Q3-0001-SM-G8OXO B1 Blood Whole Blood 0013756 -152 BP-59978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J8Q3-0005-SM-CNNOY B1 9.1 Blood Whole Blood 0013756 -152 BP-59979 RNA isolation_PAXgene Blood RNA (Manual) 01/26/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989682 1.71136e+06 0.952334 0.991636 0.791908 19413 1 76 0.00214303 268 0 1.23249e+08 0.0469669 270338 1.24288e+08 1.20844e+07 19430 6.13648e+07 0 0.160425 0.991636 0.785285 1.23249e+08 0.00373739 2.7729e+07 1.33808e+08 2.78333e+07 280 2.78936e+07 2.91258e+07 0.00293864 2.79249e+07 50.028 0.00217509 0.99359 0 50.0938 GTEX-1J8Q3-0126-SM-C1YSI 1 B1 2 pieces; not congested 6.9 Spleen Spleen 0002106 113 823 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98923 486135 0.961777 0.991777 0.734066 24057 1 76 0.00205363 158 0 7.76465e+07 0.0378248 310691 7.82903e+07 3.89176e+06 24101 3.86031e+07 0 0.227712 0.991777 0.72803 7.76465e+07 0.00272007 1.69643e+07 7.47905e+06 1.71311e+07 179 1.71672e+07 1.10057e+07 0.00238599 1.71076e+07 49.913 0.00396845 0.994325 0 50.2447 GTEX-1J8Q3-0226-SM-C1YR4 0 B1 2 pieces; no lesions; well dissected 6.9 Thyroid Thyroid 0002046 114 822 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990115 544412 0.967653 0.992549 0.75244 24214 1 76 0.00179618 276 0 9.91536e+07 0.0320888 342774 9.98979e+07 4.74259e+06 24265 4.93477e+07 0 0.215213 0.992549 0.746833 9.91536e+07 0.00221173 2.16999e+07 9.05453e+06 2.18701e+07 280 2.19085e+07 1.52099e+07 0.00200345 2.18783e+07 49.9655 0.00343124 0.994983 0 50.1953 GTEX-1J8Q3-0326-SM-CE6TD 1 B1 4 pieces; 1 piece with 70% fat 8.9 Adrenal Gland Adrenal Gland 0002369 114 822 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989918 596240 0.977812 0.991422 0.825196 23516 1 76 0.00755687 271 0 1.03959e+08 0.0218372 2.07726e+06 1.04858e+08 1.63531e+07 23549 5.17288e+07 0 0.152617 0.991422 0.818117 1.03959e+08 0.00728344 2.30834e+07 1.3198e+07 2.3181e+07 270 2.33194e+07 1.69913e+07 0.00742036 2.30757e+07 49.7373 0.0198102 0.992926 0 50.1056 GTEX-1J8Q3-0526-SM-ARL8U 0 B1 6 pieces; 5% dermal fat; well trimmed 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 117 819 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990993 676772 0.955066 0.991146 0.767035 23177 1 76 0.00176278 152 0 6.11986e+07 0.0446987 477668 6.17453e+07 5.32698e+06 23207 3.04211e+07 0 0.18803 0.991146 0.760244 6.11986e+07 0.00228472 1.32897e+07 1.59598e+07 1.33312e+07 142 1.35954e+07 1.05169e+07 0.00202371 1.3039e+07 48.9553 0.00773611 0.991299 0 50.0781 GTEX-1J8Q3-0626-SM-AHZ3V 0 B1 2 pieces; PANin 1A; 10% internal fat 8.3 Pancreas Pancreas 0001150 118 818 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988937 349453 0.979633 0.990431 0.856681 22754 1 76 0.00688781 132 0 1.12055e+08 0.0200236 249867 1.13138e+08 1.95859e+07 22776 5.57864e+07 0 0.122952 0.990431 0.848483 1.12055e+08 0.00894955 2.56399e+07 3.52263e+07 2.60495e+07 152 2.5927e+07 3.38992e+07 0.00791713 2.5929e+07 50.0019 0.00220852 0.991925 0 50.3961 GTEX-1J8Q3-0726-SM-AHZ3W 0 B1 2 pieces; active spermatogenesis 7.7 Testis Testis 0000473 120 816 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987212 294508 0.942017 0.988786 0.710496 31309 1 76 0.00672708 120 0 6.68903e+07 0.0577214 724257 6.76489e+07 1.21949e+07 31361 3.32544e+07 0 0.231522 0.988786 0.702528 6.68903e+07 0.00837317 1.42927e+07 7.72108e+06 1.4431e+07 127 1.44162e+07 9.22984e+06 0.00754882 1.44019e+07 49.9752 0.0107061 0.99036 0 50.2407 GTEX-1J8Q3-0826-SM-A8N8W 0 B1 2 pieces; no lesions 7.9 Lung Lung 0008952 122 814 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985221 237547 0.973031 0.987868 0.780682 23923 1 76 0.0107447 121 0 6.97001e+07 0.0266531 301940 7.0556e+07 1.2812e+07 23949 3.46293e+07 0 0.192349 0.987868 0.771211 6.97001e+07 0.0110408 1.53864e+07 6.70497e+06 1.55449e+07 132 1.55872e+07 1.17302e+07 0.0108923 1.55257e+07 49.9012 0.00427943 0.990515 0 50.2561 GTEX-1J8Q3-0926-SM-A96SU 0 B1 2 pieces; no lesions 8.4 Prostate Prostate 0002367 129 807 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.993267 264570 0.969228 0.994783 0.774231 24918 1 76 0.00176232 276 0 9.06114e+07 0.0304935 261556 9.10866e+07 2.79507e+06 24956 4.51595e+07 0 0.194997 0.994783 0.770191 9.06114e+07 0.00237769 1.98322e+07 8.27844e+06 1.99739e+07 257 1.99826e+07 1.57381e+07 0.00206954 1.99518e+07 49.9614 0.00287151 0.996298 0 50.1779 GTEX-1J8Q3-1026-SM-CGQED 1 B1 6 pieces; slight linear plaques; 1.8mm calcification 7.8 Blood Vessel Artery - Aorta 0001496 132 804 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99224 498181 0.974669 0.994053 0.839357 24377 1 76 0.00355057 524 0 1.60425e+08 0.0249997 296586 1.61385e+08 1.09013e+07 24411 7.98985e+07 0 0.135312 0.994053 0.834365 1.60425e+08 0.00387982 3.49043e+07 1.15574e+07 3.50357e+07 437 3.49879e+07 2.91285e+07 0.00370611 3.51792e+07 50.1363 0.00183775 0.995865 0 50.0939 GTEX-1J8Q3-1126-SM-ARU8N 0 B1 2 pieces; <5% fibrous content 8.7 Heart Heart - Atrial Appendage 0006631 138 798 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993902 423576 0.979042 0.995079 0.839083 22781 1 76 0.00168819 269 0 1.01668e+08 0.0206683 1.56031e+06 1.02171e+08 3.31624e+06 22801 5.06799e+07 0 0.139959 0.995079 0.834954 1.01668e+08 0.00221974 2.17905e+07 1.2973e+07 2.20689e+07 307 2.19776e+07 1.68105e+07 0.00195365 2.19723e+07 49.9939 0.0152715 0.996255 0 50.3174 GTEX-1J8Q3-1226-SM-CKZPT 1 B1 2 pieces; no lesions; <2% fat content 8.6 Heart Heart - Left Ventricle 0006566 138 798 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991641 558248 0.984506 0.993886 0.871685 21605 1 76 0.00161614 372 0 1.16859e+08 0.0151621 1.91044e+06 1.17577e+08 1.14189e+07 21624 5.81923e+07 0 0.11282 0.993886 0.866356 1.16859e+08 0.0028934 2.57519e+07 1.59722e+07 2.59214e+07 334 2.58836e+07 2.10929e+07 0.00225333 2.59955e+07 50.1079 0.0162483 0.99613 0 50.1641 GTEX-1J8Q3-1326-SM-CMKI1 0 B1 2 pieces; occasional ducts 7.1 Breast Breast - Mammary Tissue 0008367 141 795 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994867 391017 0.972718 0.995752 0.785165 24499 1 76 0.00200578 279 0 9.88621e+07 0.0269984 387320 9.92838e+07 7.06814e+06 24541 4.92882e+07 0 0.187553 0.995752 0.78183 9.88621e+07 0.00254125 2.17572e+07 8.39648e+06 2.1905e+07 268 2.19076e+07 1.68795e+07 0.00227328 2.18422e+07 49.9253 0.00390114 0.996637 0 50.1693 GTEX-1J8Q3-1426-SM-CKZPU 0 B1 2 fragmented pieces; no lesions; <10% internal fat 8.5 Muscle Muscle - Skeletal 0011907 143 793 BP-72085 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992849 429154 0.98479 0.994699 0.890369 19987 1 76 0.00159476 385 0 1.18498e+08 0.0149494 1.47981e+06 1.19129e+08 1.06367e+07 19994 5.90507e+07 0 0.0944207 0.994699 0.885648 1.18498e+08 0.00267639 2.56556e+07 1.39342e+07 2.59065e+07 344 2.59811e+07 2.64554e+07 0.00213457 2.57737e+07 49.7997 0.0124219 0.996548 0 50.2433 GTEX-1J8Q3-1526-SM-CMKGB 1 B1 2 pieces; <10% fibrous content 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 145 791 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.995087 315394 0.973344 0.995955 0.797331 26497 1 76 0.00190183 381 0 1.264e+08 0.0263442 602963 1.26913e+08 8.12271e+06 26544 6.30376e+07 0 0.176013 0.995955 0.794106 1.264e+08 0.0027839 2.78871e+07 1.06967e+07 2.80417e+07 341 2.80454e+07 2.24342e+07 0.00234248 2.79882e+07 49.9489 0.00475098 0.996824 0 50.1382 GTEX-1J8Q3-1626-SM-CMKGC 0 B1 6 pieces; well trimmed; 5% dermal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 149 787 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994975 236334 0.971728 0.995773 0.782807 24150 1 76 0.00204543 227 0 8.46958e+07 0.028037 457815 8.50554e+07 6.41756e+06 24177 4.2237e+07 0 0.188921 0.995773 0.779497 8.46958e+07 0.00240332 1.85583e+07 8.40467e+06 1.87456e+07 224 1.87423e+07 1.41231e+07 0.00222423 1.86273e+07 49.8461 0.00538255 0.99657 0 50.2511 GTEX-1J8Q3-1726-SM-CMKGD 1 B1 3 pieces; severe intimal sclerosis and mainly medial calcification; well trimmed 7 Blood Vessel Artery - Tibial 0007610 153 783 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994374 288254 0.973826 0.995305 0.793473 23162 1 76 0.00203467 211 0 9.20903e+07 0.0258603 259319 9.25247e+07 6.87761e+06 23196 4.58942e+07 0 0.180352 0.995305 0.789748 9.20903e+07 0.0027931 2.01222e+07 7.04308e+06 2.02391e+07 231 2.0211e+07 1.62007e+07 0.00241353 2.02405e+07 50.0365 0.0028027 0.996236 0 50.1448 GTEX-1J8Q3-1826-SM-A9SLJ 1 B1 2 fragmented pieces; 30% fat 7.6 Nerve Nerve - Tibial 0001323 154 782 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.989809 356897 0.96621 0.991338 0.729721 24376 1 76 0.00639484 151 0 8.0966e+07 0.033563 237551 8.16735e+07 1.38666e+07 24425 4.03068e+07 0 0.236489 0.991338 0.7234 8.0966e+07 0.0076829 1.77645e+07 7.44115e+06 1.78583e+07 152 1.78693e+07 1.16928e+07 0.00703788 1.78721e+07 50.0038 0.00290854 0.992867 0 50.1316 GTEX-1J8Q3-1926-SM-C1YSJ 1 B1 6 pieces; little muscularis in 4 pieces, none in 2 5.8 Stomach Stomach 0000945 159 777 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.983867 543195 0.97919 0.98686 0.846199 22288 1 76 0.00162938 326 0 9.12413e+07 0.0205487 1.29229e+06 9.24562e+07 4.06735e+06 22312 4.53111e+07 0 0.132992 0.98686 0.83508 9.12413e+07 0.00215322 2.08653e+07 7.99697e+07 2.11784e+07 263 2.1228e+07 2.2679e+07 0.0018905 2.10676e+07 49.8103 0.0139774 0.989853 0 50.3723 GTEX-1J8Q3-2026-SM-CE6R3 0 B1 6 pieces; well dissected 8.6 Esophagus Esophagus - Muscularis 0004648 161 775 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.991442 358746 0.978118 0.992448 0.831439 22573 1 76 0.00754467 167 0 8.3006e+07 0.0215625 452409 8.36377e+07 1.2532e+07 22592 4.13397e+07 0 0.14668 0.992448 0.82516 8.3006e+07 0.00706546 1.80141e+07 7.62088e+06 1.81178e+07 168 1.81473e+07 1.5637e+07 0.00730531 1.80624e+07 49.8827 0.00540915 0.993454 0 50.1436 GTEX-1J8Q3-2126-SM-ARU8O 0 B1 6 pieces; well dissected 8.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 164 772 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992836 348380 0.977061 0.993914 0.820909 22973 1 76 0.00183708 291 0 9.97463e+07 0.0226162 413120 1.00357e+08 3.31364e+06 23006 4.97295e+07 0 0.156152 0.993914 0.815913 9.97463e+07 0.0024076 2.16464e+07 8.01162e+06 2.17486e+07 283 2.17516e+07 1.91494e+07 0.00212203 2.17398e+07 49.9865 0.0041165 0.994993 0 50.1178 GTEX-1J8Q3-2226-SM-A8N8X 0 B1 6 pieces; well dissected; slight surface desquamation 9.7 Esophagus Esophagus - Mucosa 0006920 165 771 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.9829 1.88959e+06 0.924031 0.985072 0.74275 24552 1 76 0.0106279 176 0 1.03776e+08 0.0754733 572246 1.05349e+08 1.83948e+07 24576 5.15965e+07 0 0.181281 0.985072 0.731662 1.03776e+08 0.010615 2.19583e+07 7.69646e+07 2.23102e+07 182 2.2388e+07 1.87674e+07 0.0106214 2.21354e+07 49.7163 0.00543192 0.987244 0 50.3974 GTEX-1J8Q3-2326-SM-A8N8Y 0 B1 6 pieces; well preserved and dissected 8.2 Colon Colon - Transverse 0001157 172 764 BP-64643 RNA Extraction from Paxgene-derived Lysate Plate Based 06/18/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.987047 259722 0.970521 0.989035 0.775803 24464 1 76 0.0108883 178 0 8.64811e+07 0.028788 1.27193e+06 8.74399e+07 1.53775e+07 24497 4.29866e+07 0 0.194717 0.989035 0.767297 8.64811e+07 0.0102861 1.89551e+07 1.31318e+07 1.93489e+07 188 1.93643e+07 1.17618e+07 0.0105878 1.90872e+07 49.6397 0.0145463 0.991023 0 50.514 GTEX-1J8Q3-2426-SM-CL53S 0 B1 6 pieces; well dissected except for 1 piece with 4mm mucosa 8.4 Colon Colon - Sigmoid 0001159 173 763 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993165 485077 0.973749 0.994557 0.805759 23025 1 76 0.00246331 220 0 9.70217e+07 0.0259407 509045 9.75527e+07 1.20966e+07 23051 4.83241e+07 0 0.16799 0.994557 0.801373 9.70217e+07 0.00342695 2.10093e+07 8.31376e+06 2.11619e+07 255 2.11839e+07 1.69246e+07 0.00294446 2.11114e+07 49.9143 0.00521815 0.995948 0 50.1809 GTEX-1J8Q3-2526-SM-CNNQ4 0 B1 6 pieces; well preserved mucosa and numerous lymphoid nodules 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 175 761 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991447 816486 0.971246 0.99278 0.773194 24296 1 76 0.00244578 286 0 1.09678e+08 0.0284577 1.11996e+06 1.10475e+08 1.12827e+07 24337 5.45651e+07 0 0.198051 0.99278 0.767612 1.09678e+08 0.00324378 2.4165e+07 1.72999e+07 2.43858e+07 308 2.4626e+07 1.52953e+07 0.00284424 2.40412e+07 49.3992 0.0101376 0.994112 0 50.2274 GTEX-1J8Q3-5007-SM-AN484 B1 Heart Heart - Left Ventricle 0006566 140 ChIP-Seq GTEX-1J8Q3-5010-SM-AN486 B1 Muscle Muscle - Skeletal 0011907 144 ChIP-Seq GTEX-1J8QM-0004-SM-G8OXQ B1 Blood Whole Blood 0013756 -178 BP-59978 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2015 LCSET-11677 08/16/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1J8QM-0006-SM-CNNP1 B1 8.9 Blood Whole Blood 0013756 -178 BP-59979 RNA isolation_PAXgene Blood RNA (Manual) 01/26/2015 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989629 2.18109e+06 0.925105 0.991467 0.754244 19483 1 76 0.00261447 153 0 1.0287e+08 0.0740501 246255 1.03756e+08 1.09171e+07 19501 5.12083e+07 0 0.170862 0.991467 0.747808 1.0287e+08 0.0036932 2.23692e+07 1.30347e+08 2.24792e+07 194 2.2532e+07 2.26134e+07 0.00315284 2.2538e+07 50.0067 0.00237341 0.993305 0 50.1227 GTEX-1J8QM-0126-SM-D3L9A 1 B1 6 pieces; trace rim of adventitia 8 Blood Vessel Artery - Aorta 0001496 169 1182 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991158 456906 0.974041 0.993244 0.810964 23236 1 76 0.00242464 280 0 1.07437e+08 0.0255311 219995 1.08168e+08 1.05575e+07 23274 5.34798e+07 0 0.163077 0.993244 0.805486 1.07437e+08 0.00378569 2.3368e+07 8.33805e+06 2.35466e+07 316 2.36003e+07 1.97331e+07 0.00310374 2.35268e+07 49.922 0.00203383 0.995331 0 50.1904 GTEX-1J8QM-0226-SM-CYPSI 1 B1 2 pieces; patent lumen with atherosclerotic plaque; up to ~2mm adherent adventitia and external fat 8.2 Blood Vessel Artery - Coronary 0001621 178 1173 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995102 340850 0.975422 0.995757 0.828895 23759 1 76 0.00213811 280 0 1.03452e+08 0.024208 310696 1.03893e+08 7.46119e+06 23783 5.15939e+07 0 0.146527 0.995757 0.825379 1.03452e+08 0.00261279 2.24603e+07 7.02542e+06 2.26101e+07 299 2.25767e+07 2.11173e+07 0.00237529 2.25639e+07 49.9859 0.00299053 0.996412 0 50.1662 GTEX-1J8QM-0326-SM-CL53D 1 B1 2 pieces; one contains ~15% fat 8.9 Heart Heart - Atrial Appendage 0006631 181 1170 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992723 619950 0.97576 0.994573 0.837202 22253 1 76 0.00233374 203 0 8.77873e+07 0.0239021 1.80563e+06 8.82663e+07 1.09928e+07 22276 4.36977e+07 0 0.138558 0.994573 0.832658 8.77873e+07 0.0038224 1.89773e+07 8.51348e+06 1.92583e+07 218 1.92569e+07 1.55845e+07 0.00307669 1.91152e+07 49.8154 0.0204566 0.996422 0 50.3674 GTEX-1J8QM-0426-SM-AHZ3X 2 B1 2 pieces; 7.2 Heart Heart - Left Ventricle 0006566 194 1157 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.99038 517950 0.982052 0.991828 0.864328 23043 1 76 0.00655805 270 0 1.26868e+08 0.0176084 1.27494e+06 1.27913e+08 2.23532e+07 23061 6.31669e+07 0 0.117725 0.991828 0.857265 1.26868e+08 0.00823012 2.77789e+07 1.47961e+07 2.81282e+07 305 2.80744e+07 2.58281e+07 0.00739286 2.79869e+07 49.922 0.00996724 0.993277 0 50.3124 GTEX-1J8QM-0526-SM-AHZ3Y 1 B1 2 pieces; 1 piece includes large vessel, few thick walled vessels and focally collapsed alveolar spaces; congestion 6 Lung Lung 0008952 190 1161 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988505 402771 0.972991 0.990191 0.805705 25207 1 76 0.00687863 168 0 9.04864e+07 0.0265503 360035 9.13827e+07 1.61721e+07 25244 4.50131e+07 0 0.167286 0.990191 0.797802 9.04864e+07 0.00889984 1.99836e+07 8.39401e+06 2.02101e+07 175 2.02122e+07 1.6852e+07 0.00788751 2.01258e+07 49.8929 0.00393986 0.991878 0 50.2818 GTEX-1J8QM-0726-SM-CE6RF 1 B1 2 pieces; interstitial fibrosis and micronodularity with scattered lymphocytic aggregates likely Hashimoto's thyroiditis, 1 piece is ~ 40% fat/fibrous/vessels 7 Thyroid Thyroid 0002046 198 1153 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989296 239320 0.96494 0.990353 0.725992 24347 1 76 0.00821501 109 0 6.06328e+07 0.0343077 1.05932e+06 6.12235e+07 9.31218e+06 24376 3.0165e+07 0 0.238948 0.990353 0.718989 6.06328e+07 0.00740279 1.32565e+07 7.9496e+06 1.34369e+07 117 1.34317e+07 7.49746e+06 0.00780933 1.33214e+07 49.7939 0.0173025 0.99141 0 50.338 GTEX-1J8QM-0826-SM-CJI2P 1 B1 6 pieces; essentially well trimmed target muscularis 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 204 1147 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.994037 698304 0.976949 0.995067 0.836693 21933 1 76 0.00196552 179 0 7.78841e+07 0.0227077 346087 7.82702e+07 5.12201e+06 21949 3.87977e+07 0 0.140255 0.995067 0.832566 7.78841e+07 0.00231322 1.67856e+07 5.63315e+06 1.6949e+07 177 1.69902e+07 1.59237e+07 0.00213919 1.68193e+07 49.7472 0.00442169 0.996098 0 50.2422 GTEX-1J8QM-0926-SM-C1YQ9 1 B1 2 pieces; spleen, not liver; congestion 7.8 Spleen Spleen 0002106 214 1137 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.986226 526351 0.9596 0.988573 0.736423 24809 1 76 0.00237806 162 0 8.51087e+07 0.0394399 281447 8.60925e+07 4.02871e+06 24848 4.23094e+07 0 0.223177 0.988573 0.728008 8.51087e+07 0.00285492 1.85956e+07 1.23663e+07 1.87394e+07 183 1.88023e+07 1.3489e+07 0.00261592 1.87202e+07 49.8906 0.00326912 0.990919 0 50.1925 GTEX-1J8QM-1026-SM-C1YQA 1 B1 6 pieces; mucosa and submucosa with abundance of target lymphoid aggregates 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 218 1133 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988998 517556 0.968096 0.991384 0.76615 25542 1 76 0.00216872 278 0 9.69595e+07 0.0310719 698357 9.78021e+07 4.20967e+06 25592 4.82217e+07 0 0.201946 0.991384 0.759549 9.69595e+07 0.00263591 2.14184e+07 9.99739e+06 2.16011e+07 257 2.16853e+07 1.57413e+07 0.00240175 2.15403e+07 49.8324 0.00714051 0.993771 0 50.2123 GTEX-1J8QM-1126-SM-C1YQB 1 B1 6 pieces; gastric mucosa with variable attachment of submucosa 6.7 Stomach Stomach 0000945 216 1135 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.983041 344667 0.981812 0.985717 0.848298 22182 1 76 0.00172801 317 0 8.78107e+07 0.0179231 1.34685e+06 8.9083e+07 4.09558e+06 22202 4.36346e+07 0 0.133514 0.985717 0.836182 8.78107e+07 0.00230601 2.02141e+07 8.72775e+07 2.04769e+07 243 2.05947e+07 2.3742e+07 0.00201623 2.03188e+07 49.6628 0.015119 0.988394 0 50.3229 GTEX-1J8QM-1226-SM-CY8HI 1 B1 6 pieces; essentially well trimmed target muscularis 7.8 Colon Colon - Sigmoid 0001159 231 1120 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990261 515183 0.973835 0.992334 0.810864 23030 1 76 0.00450409 164 0 8.17544e+07 0.0258387 350624 8.2386e+07 9.43823e+06 23054 4.06752e+07 0 0.162972 0.992334 0.804648 8.17544e+07 0.00760691 1.76338e+07 6.54564e+06 1.77725e+07 167 1.78182e+07 1.52188e+07 0.00605226 1.77494e+07 49.9034 0.00425587 0.994407 0 50.1959 GTEX-1J8QM-1426-SM-A8N9B 1 B1 6 pieces; mucosa, submucosa, muscularis (variable in composition) 7.7 Colon Colon - Transverse 0001157 239 1112 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.985182 258168 0.971207 0.987627 0.803835 24301 1 76 0.0112021 173 0 8.02917e+07 0.0277181 1.59605e+06 8.12976e+07 1.48099e+07 24331 3.98702e+07 0 0.167371 0.987627 0.793889 8.02917e+07 0.0107747 1.76309e+07 1.12062e+07 1.80089e+07 168 1.80219e+07 1.1762e+07 0.010989 1.77912e+07 49.6778 0.0196322 0.990072 0 50.5303 GTEX-1J8QM-1526-SM-A8N9C 1 B1 2 pieces; mostly myometrium, one piece contains atrophic endometrial glands (outlined) 7.8 Uterus Uterus 0000995 241 1110 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7844 09/21/2015 TruSeq.v1 EXCLUDE 0.987508 241753 0.966815 0.989469 0.762535 25064 1 76 0.0108412 165 0 9.0043e+07 0.0329244 263159 9.10013e+07 1.62327e+07 25105 4.47819e+07 0 0.20428 0.989469 0.754505 9.0043e+07 0.0104091 1.96267e+07 9.70842e+06 1.98299e+07 168 1.98535e+07 1.4964e+07 0.0106256 1.97808e+07 49.9083 0.00289181 0.99143 0 50.2574 GTEX-1J8QM-1726-SM-A9G35 1 B1 6 pieces; well trimmed target muscularis 8.1 Esophagus Esophagus - Muscularis 0004648 260 1091 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7846 09/23/2015 TruSeq.v1 RNASEQ 0.985428 206701 0.972832 0.990876 0.80075 22810 1 76 0.00356202 172 0 7.99374e+07 0.0268974 507409 8.06734e+07 6.80492e+06 22831 3.96681e+07 0 0.172081 0.990876 0.793444 7.99374e+07 0.00416455 1.70657e+07 6.86312e+06 1.73258e+07 177 1.74356e+07 1.33499e+07 0.00385771 1.73424e+07 49.866 0.00628967 0.996324 0 50.3781 GTEX-1J8QM-1826-SM-A96TA 1 B1 2 pieces; lobules of salivary gland with attached squamous epithelium/lip (outlined), small amount of fat admixed, mild chronic inflammation 8.7 Salivary Gland Minor Salivary Gland 0006330 264 1087 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7845 09/19/2015 TruSeq.v1 RNASEQ 0.99023 323303 0.969793 0.991631 0.781061 25244 1 76 0.00254692 281 0 9.14854e+07 0.0281676 323874 9.22576e+07 3.08437e+06 25278 4.54964e+07 0 0.188732 0.991631 0.774524 9.14854e+07 0.00287509 2.03827e+07 1.28887e+07 2.0521e+07 258 2.05711e+07 1.5787e+07 0.00271077 2.04517e+07 49.8544 0.00351054 0.993031 0 50.1691 GTEX-1J8QM-1926-SM-AHZ3Z 1 B1 6 pieces; well preserved mucosa with scattered submucosal glands (outlined) 6.6 Esophagus Esophagus - Mucosa 0006920 280 1071 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.989499 257630 0.975264 0.991041 0.814152 22643 1 76 0.00497205 147 0 7.79461e+07 0.024283 323070 7.86507e+07 9.29405e+06 22662 3.88101e+07 0 0.161113 0.991041 0.806857 7.79461e+07 0.00651786 1.74684e+07 1.09396e+07 1.75975e+07 155 1.76136e+07 1.56367e+07 0.00574375 1.75681e+07 49.9353 0.00410765 0.992582 0 50.184 GTEX-1J8QM-2026-SM-ARZMW 1 B1 2 pieces; dense fibrofatty stroma and scattered ductal structures with a few residual small atrophic lobules, 30 and 50% fat 5.8 Breast Breast - Mammary Tissue 0008367 293 1058 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988749 642391 0.969783 0.99089 0.778194 24098 1 76 0.00250411 133 0 6.51014e+07 0.0294999 234290 6.57e+07 2.83786e+06 24132 3.23001e+07 0 0.191588 0.99089 0.771105 6.51014e+07 0.00377467 1.42285e+07 6.29423e+06 1.44156e+07 141 1.45971e+07 1.19623e+07 0.00313802 1.41757e+07 49.2677 0.00356606 0.993031 0 50.3265 GTEX-1J8QM-2126-SM-CYPSJ 1 B1 6 pieces; ~10% - 15% internal/periadnexal fat; epidermis ~35 microns thick 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 299 1052 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994954 234167 0.974666 0.995645 0.822542 22288 1 76 0.00220812 219 0 6.85069e+07 0.025092 379167 6.88066e+07 5.05692e+06 22313 3.4162e+07 0 0.152124 0.995645 0.818959 6.85069e+07 0.00274155 1.48393e+07 6.68741e+06 1.49224e+07 171 1.48885e+07 1.24044e+07 0.00247465 1.49245e+07 50.0605 0.00551062 0.996336 0 50.1396 GTEX-1J8QM-2226-SM-CYPSK 1 B1 2 pieces; mild to moderate autolysis 8 Muscle Muscle - Skeletal 0011907 309 1042 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995765 295710 0.981686 0.996519 0.866239 19812 1 76 0.00192431 175 0 7.4956e+07 0.0180793 816853 7.52179e+07 5.26492e+06 19825 3.73886e+07 0 0.115447 0.996519 0.863223 7.4956e+07 0.00246471 1.64974e+07 6.29799e+06 1.66594e+07 192 1.66346e+07 1.52348e+07 0.00219431 1.65727e+07 49.9068 0.0108598 0.997273 0 50.2443 GTEX-1J8QM-2326-SM-CYPSL 1 B1 2 pieces; mature adipose tissue with trace of fibrovascular component 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 254 1097 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994851 215161 0.974893 0.995596 0.817097 21845 1 76 0.00226723 144 0 6.4045e+07 0.0248249 461678 6.43283e+07 4.65945e+06 21866 3.1936e+07 0 0.157796 0.995596 0.813498 6.4045e+07 0.00265309 1.40332e+07 5.70224e+06 1.41827e+07 163 1.41465e+07 9.95707e+06 0.00246002 1.41174e+07 49.9485 0.0071769 0.99634 0 50.2649 GTEX-1J8QM-2426-SM-A9SLS 1 B1 6 pieces; ~5% - 10% periadnexal fat 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 316 1035 BP-64741 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2015 LCSET-7847 09/27/2015 TruSeq.v1 RNASEQ 0.990306 301768 0.970081 0.991688 0.782158 24211 1 76 0.00640396 188 0 9.19104e+07 0.0296834 453276 9.26807e+07 1.58656e+07 24251 4.57764e+07 0 0.187923 0.991688 0.775657 9.19104e+07 0.00763371 2.01437e+07 1.10945e+07 2.02942e+07 185 2.03013e+07 1.54752e+07 0.00701798 2.02607e+07 49.95 0.00489073 0.993071 0 50.1861 GTEX-1J8QM-2626-SM-CYPSM 1 B1 2 pieces; up to 40% internal/external fat 5.8 Nerve Nerve - Tibial 0001323 321 1030 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994223 169123 0.963135 0.994838 0.717335 23547 1 76 0.00232907 142 0 6.49299e+07 0.036645 191922 6.52668e+07 4.64881e+06 23587 3.23695e+07 0 0.245801 0.994838 0.713632 6.49299e+07 0.00278193 1.42237e+07 5.96661e+06 1.43142e+07 149 1.42637e+07 8.64712e+06 0.00255536 1.43154e+07 50.0905 0.00294058 0.995452 0 50.1586 GTEX-1J8QM-5004-SM-AN49A B1 Heart Heart - Left Ventricle 0006566 214 ChIP-Seq GTEX-1J8QM-5019-SM-AN499 B1 Muscle Muscle - Skeletal 0011907 308 ChIP-Seq GTEX-1JJ6O-0001-SM-DIND4 B1 Blood Whole Blood 0013756 893 BP-60193 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2015 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1JJ6O-0001-SM-DLIOO B1 Blood Whole Blood 0013756 893 BP-60193 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JJ6O-0005-SM-DHXJ4 B1 7.7 Blood Whole Blood 0013756 893 BP-60197 RNA isolation_PAXgene Blood RNA (Manual) 02/03/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.954706 245553 0.991028 0.955454 0.826734 16336 1 76 0.00223503 189 0 1.16364e+08 0.00786595 155575 1.2179e+08 5.64734e+06 16339 5.79494e+07 0 0.164293 0.955454 0.789906 1.16364e+08 0.00250767 2.81607e+07 2.04999e+08 2.81172e+07 230 2.81354e+07 3.56026e+07 0.00237124 2.8248e+07 50.0998 0.00127741 0.956201 0 49.9613 GTEX-1JJ6O-0011-R11b-SM-EXUS2 B1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 640 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99137 669794 0.963016 0.992229 0.829713 22967 1 76 0.00170178 269 0 8.72534e+07 0.0365076 2.76995e+06 8.79368e+07 2.27648e+06 22985 4.34454e+07 0 0.133302 0.992229 0.823266 8.72534e+07 0.00218031 1.90955e+07 9.61074e+06 1.93377e+07 312 1.93361e+07 1.14984e+07 0.00194084 1.91566e+07 49.7669 0.0314994 0.993089 0 50.3152 GTEX-1JJ6O-0011-R7b-SM-EXUTB B1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 640 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992187 326719 0.970589 0.993029 0.865395 21698 1 76 0.00150034 191 0 6.16465e+07 0.0291712 4.01756e+06 6.20792e+07 1.9701e+06 21710 3.07172e+07 0 0.105193 0.993029 0.859363 6.16465e+07 0.00201051 1.35640e+07 7.20286e+06 1.38603e+07 214 1.37297e+07 6.30948e+06 0.00175521 1.37338e+07 50.0074 0.0647167 0.993871 0 50.5401 GTEX-1JJ6O-0011-R9a-SM-EYYXP B1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 640 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.983585 199147 0.963724 0.987325 0.845644 22911 1 76 0.00214645 284 0 7.42755e+07 0.0359679 2.8312e+06 7.5229e+07 2.92071e+06 22928 3.69003e+07 0 0.118079 0.987325 0.834925 7.42755e+07 0.0039777 1.63295e+07 7.51219e+06 1.67083e+07 266 1.65624e+07 8.30031e+06 0.00305861 1.67227e+07 50.2409 0.0376344 0.991065 0 50.5733 GTEX-1JJ6O-0126-SM-E6CI8 1 B1 5 pieces; well trimmed epidermis measures 35 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 946 569 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992952 292825 0.972596 0.994018 0.778743 23389 1 76 0.0019281 302 0 1.00292e+08 0.0271494 356368 1.00896e+08 6.1773e+06 23427 4.9965e+07 0 0.193853 0.994018 0.774085 1.00292e+08 0.00242441 2.1793e+07 9.82455e+06 2.19109e+07 307 2.18398e+07 1.77569e+07 0.00217599 2.19569e+07 50.1337 0.00353204 0.995085 0 50.1349 GTEX-1JJ6O-0226-SM-E6CI9 1 B1 2 pieces; includes ~10% fibrous tissue/sweat glands/nerve etc, 1 piece has large defect (?poor fixation) 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 948 567 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992398 199799 0.980549 0.9937 0.857686 22323 1 76 0.00183562 282 0 1.01731e+08 0.0190456 679159 1.02376e+08 6.45143e+06 22350 5.06661e+07 0 0.122863 0.9937 0.852282 1.01731e+08 0.00241192 2.22995e+07 8.88292e+06 2.25421e+07 327 2.24221e+07 1.97293e+07 0.00212339 2.25345e+07 50.125 0.00663394 0.995002 0 50.2706 GTEX-1JJ6O-0326-SM-CYPSZ 1 B1 2 pieces; includes up to 15-20% internal/external fat 7 Nerve Nerve - Tibial 0001323 951 564 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994645 222293 0.970156 0.995317 0.752956 23603 1 76 0.00217435 175 0 7.78714e+07 0.0295638 283280 7.82377e+07 5.14242e+06 23644 3.88304e+07 0 0.2172 0.995317 0.74943 7.78714e+07 0.00268687 1.71377e+07 6.43739e+06 1.72512e+07 179 1.72182e+07 1.25165e+07 0.00243044 1.72218e+07 50.0052 0.00362076 0.99599 0 50.1649 GTEX-1JJ6O-0426-SM-ARZMS 1 B1 2 pieces; small attachment of fat/vessels, mild, eccentric plaque 7.9 Blood Vessel Artery - Tibial 0007610 955 560 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.99023 700415 0.972324 0.992196 0.799027 21891 1 76 0.00239416 140 0 7.1383e+07 0.0272993 258920 7.19444e+07 2.68517e+06 21913 3.54678e+07 0 0.173298 0.992196 0.792791 7.1383e+07 0.00354803 1.53791e+07 5.78946e+06 1.54643e+07 155 1.55958e+07 1.32867e+07 0.00296995 1.53759e+07 49.645 0.00359889 0.994161 0 50.1381 GTEX-1JJ6O-0526-SM-AHZ3G 1 B1 2 pieces; some hyalinization of tubules, reduced/absent spermatogenesis 6.2 Testis Testis 0000473 957 558 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987351 454934 0.933241 0.988729 0.693621 34018 1 76 0.00690034 212 0 1.06855e+08 0.0665135 1.67013e+06 1.08073e+08 1.864e+07 34103 5.31649e+07 0 0.23962 0.988729 0.685803 1.06855e+08 0.00805549 2.26497e+07 1.52479e+07 2.28216e+07 211 2.28462e+07 1.39438e+07 0.00747711 2.27558e+07 49.9008 0.0154537 0.990107 0 50.1891 GTEX-1JJ6O-0626-SM-AHZ3H 1 B1 2 pieces; some interstitial fibrosis 5.6 Thyroid Thyroid 0002046 959 556 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.986914 263252 0.96895 0.988795 0.74869 25673 1 76 0.00666361 156 0 8.49107e+07 0.0308186 1.00975e+06 8.58729e+07 1.4719e+07 25717 4.22227e+07 0 0.22026 0.988795 0.740301 8.49107e+07 0.00918486 1.86896e+07 1.18684e+07 1.89102e+07 181 1.88705e+07 9.7559e+06 0.00792184 1.88771e+07 50.0088 0.0117587 0.990675 0 50.2933 GTEX-1JJ6O-0726-SM-CY8HS 1 B1 2 pieces; predominantly fibromuscular stroma with few glands and focal mild chronic inflammation 5.9 Prostate Prostate 0002367 963 552 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990126 255169 0.965717 0.991858 0.763243 25095 1 76 0.00467042 162 0 8.43617e+07 0.0340385 1.0374e+06 8.50543e+07 9.81334e+06 25134 4.19773e+07 0 0.202474 0.991858 0.757028 8.43617e+07 0.00749514 1.84135e+07 8.34543e+06 1.85672e+07 181 1.85583e+07 1.23124e+07 0.00608032 1.85661e+07 50.0105 0.0121969 0.993589 0 50.2079 GTEX-1JJ6O-0826-SM-CXZJL 1 B1 1 pieces; liver, not skin 5.7 Liver Liver 0001114 963 552 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993802 247034 0.980074 0.995044 0.860863 20955 1 76 0.00215247 370 0 9.2943e+07 0.0192444 2.40054e+06 9.34059e+07 6.41403e+06 20974 4.63056e+07 0 0.119211 0.995044 0.856596 9.2943e+07 0.00279497 2.00912e+07 1.31917e+07 2.0724e+07 351 2.06787e+07 1.43796e+07 0.00247332 2.02453e+07 49.4705 0.0257001 0.996285 0 50.7752 GTEX-1JJ6O-0926-SM-CYPT1 1 B1 2 pieces; up to 5-10% internal fat, rare atrophic fibers 8.6 Muscle Muscle - Skeletal 0011907 964 551 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995324 268270 0.984091 0.995994 0.879483 19751 1 76 0.00189992 284 0 9.47077e+07 0.0156287 1.08204e+06 9.50885e+07 7.06626e+06 19765 4.72534e+07 0 0.104609 0.995994 0.87596 9.47077e+07 0.00217361 2.09347e+07 9.50934e+06 2.11e+07 302 2.10791e+07 1.94106e+07 0.00203667 2.10121e+07 49.9205 0.0113793 0.996665 0 50.1966 GTEX-1JJ6O-1426-SM-CY8HT 1 B1 6 pieces; muscularis 6.6 Esophagus Esophagus - Muscularis 0004648 982 533 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990447 249285 0.967783 0.992169 0.784149 23137 1 76 0.00457257 155 0 7.72194e+07 0.032012 1.35313e+06 7.78289e+07 8.66646e+06 23164 3.84269e+07 0 0.183634 0.992169 0.778008 7.72194e+07 0.0073084 1.67589e+07 7.13853e+06 1.6938e+07 176 1.69152e+07 1.05151e+07 0.00593811 1.69066e+07 49.9872 0.017386 0.99389 0 50.2657 GTEX-1JJ6O-1626-SM-CM2RM 2 B1 6 pieces; muscularis 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 983 532 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.988329 194630 0.967676 0.989645 0.783319 24242 1 76 0.00198506 373 0 1.10737e+08 0.0320976 3.0929e+06 1.11896e+08 6.71687e+06 24289 5.5131e+07 0 0.184358 0.989645 0.775207 1.10737e+08 0.00313566 2.41706e+07 9.98165e+06 2.43705e+07 366 2.43506e+07 1.43224e+07 0.0025596 2.43309e+07 49.9798 0.0276408 0.99096 0 50.2059 GTEX-1JJ6O-1826-SM-CL53J 1 B1 6 pieces; mild plaque 6.8 Blood Vessel Artery - Aorta 0001496 985 530 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990202 401723 0.973194 0.991858 0.737404 23945 1 76 0.00302696 156 0 8.32185e+07 0.0262479 307771 8.39016e+07 1.13327e+07 23986 4.1368e+07 0 0.23579 0.991858 0.7314 8.32185e+07 0.00426636 1.81797e+07 7.65617e+06 1.82268e+07 171 1.82993e+07 1.35679e+07 0.00364563 1.82442e+07 49.9246 0.00366824 0.993514 0 50.0647 GTEX-1JJ6O-2126-SM-CNNP6 1 B1 2 pieces 5.6 Heart Heart - Left Ventricle 0006566 995 520 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992969 189130 0.982959 0.995134 0.854057 21232 1 76 0.00202207 367 0 1.07254e+08 0.0169496 6.18671e+06 1.07778e+08 1.18317e+07 21246 5.34386e+07 0 0.128903 0.995134 0.849901 1.07254e+08 0.00321193 2.36739e+07 2.34523e+07 2.4318e+07 339 2.43772e+07 8.89821e+06 0.00261571 2.37954e+07 49.3962 0.0574023 0.9973 0 50.671 GTEX-1JJ6O-2226-SM-AHZ3I 1 B1 2 pieces; small attachment of fat, interstitial fibrosis 6.6 Heart Heart - Atrial Appendage 0006631 996 519 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989946 420981 0.973609 0.991329 0.791575 23648 1 76 0.0065613 199 0 1.05975e+08 0.0261631 1.85463e+06 1.06902e+08 1.77226e+07 23678 5.27462e+07 0 0.182034 0.991329 0.784711 1.05975e+08 0.00828619 2.27321e+07 1.15425e+07 2.30621e+07 253 2.30281e+07 1.60638e+07 0.00742254 2.28919e+07 49.8517 0.0173489 0.992712 0 50.3604 GTEX-1JJ6O-2426-SM-ARU8J 2 B1 6 pieces; full thickness sections, mucosa largely autolyzed 6.8 Colon Colon - Transverse 0001157 1003 512 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.990738 253865 0.970132 0.991866 0.803716 22840 1 76 0.00261279 129 0 6.02794e+07 0.0274698 326472 6.07737e+07 2.18441e+06 22868 2.99613e+07 0 0.166417 0.991866 0.797178 6.02794e+07 0.00320328 1.31685e+07 6.56786e+06 1.32737e+07 142 1.32863e+07 1.02101e+07 0.0029077 1.32187e+07 49.8726 0.00537192 0.992995 0 50.199 GTEX-1JJ6O-2526-SM-AHZ3J 1 B1 6 pieces; glomeruli in all sections, few sclerotic glomeruli, small portion of medulla 6 Kidney Kidney - Cortex 0001225 1006 509 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989589 297159 0.978615 0.990974 0.829706 23377 1 76 0.00659182 368 0 1.15121e+08 0.0212682 6.32727e+06 1.1617e+08 2.07865e+07 23395 5.73301e+07 0 0.148909 0.990974 0.822217 1.15121e+08 0.007927 2.52713e+07 3.60524e+07 2.59201e+07 340 2.5885e+07 8.2487e+06 0.00725848 2.54016e+07 49.5287 0.0544656 0.992359 0 50.6337 GTEX-1JJ6O-2726-SM-CNPOG 1 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1014 501 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985503 240905 0.972696 0.98837 0.768672 23894 1 76 0.00549888 169 0 8.2742e+07 0.0270948 664945 8.37156e+07 2.00871e+07 23932 4.11381e+07 0 0.204024 0.98837 0.759732 8.2742e+07 0.0083851 1.81525e+07 1.04204e+07 1.82856e+07 174 1.83325e+07 1.22674e+07 0.0069378 1.83307e+07 49.9975 0.0079429 0.991237 0 50.1827 GTEX-1JJ6O-2826-SM-CNNP7 1 B1 2 pieces; 10-20% fibrous/vessels 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1017 498 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992025 262860 0.977007 0.993888 0.827819 23937 1 76 0.00224703 378 0 1.09117e+08 0.0226693 715292 1.09788e+08 1.106e+07 23969 5.43469e+07 0 0.149188 0.993888 0.822759 1.09117e+08 0.00348691 2.39695e+07 1.26053e+07 2.42476e+07 337 2.42681e+07 1.87193e+07 0.00286581 2.41427e+07 49.8706 0.0065152 0.995751 0 50.2883 GTEX-1JJ6O-2926-SM-CE6RG 1 B1 1 piece; adenohypophysis and neurohypophysis 7 Pituitary Pituitary 0000007 1049 466 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990176 391352 0.961816 0.991145 0.735457 25626 1 76 0.00799845 128 0 7.87548e+07 0.0379408 454505 7.94584e+07 1.27638e+07 25669 3.91987e+07 0 0.226359 0.991145 0.728944 7.87548e+07 0.00706213 1.65967e+07 1.01177e+07 1.66985e+07 142 1.67766e+07 1.19361e+07 0.00753075 1.65935e+07 49.7257 0.00572004 0.992113 0 50.1528 GTEX-1JJ6O-3026-SM-C1YQH 1 B1 3 pieces; residual attached meninges, Purkinje cells with some ?hypoxic change 7.2 Brain Brain - Cerebellum 0002037 1051 464 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.988894 695608 0.94944 0.991577 0.722704 24303 1 76 0.00203244 268 0 9.68795e+07 0.0502503 1.95339e+06 9.77025e+07 4.47015e+06 24339 4.81569e+07 0 0.226737 0.991577 0.716616 9.68795e+07 0.00257593 2.09456e+07 1.52897e+07 2.12152e+07 306 2.12686e+07 1.08842e+07 0.00230345 2.11183e+07 49.8228 0.0199932 0.994259 0 50.3197 GTEX-1JJ6O-3126-SM-CNNP8 1 B1 3 pieces; some residual attached meninges 6.9 Brain Brain - Cortex 0001870 1050 465 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99288 366913 0.968708 0.994767 0.836019 25040 1 76 0.0021419 373 0 1.19036e+08 0.0309004 4.17689e+06 1.19662e+08 1.23306e+07 25071 5.92908e+07 0 0.132689 0.994767 0.831644 1.19036e+08 0.00332197 2.61893e+07 1.67644e+07 2.64302e+07 331 2.64684e+07 1.47902e+07 0.00273082 2.63475e+07 49.8855 0.0349058 0.996653 0 50.2289 GTEX-1JJE9-0003-SM-DE1KN B1 Blood Whole Blood 0013756 887 BP-60388 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2015 LCSET-10232,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1JJE9-0006-SM-CGQEB B1 5.8 Blood Whole Blood 0013756 887 BP-60387 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.955571 678695 0.984177 0.957924 0.815398 17188 1 76 0.00366673 262 0 2.2177e+08 0.0129253 487646 2.31511e+08 1.61094e+07 17190 1.10152e+08 0 0.168779 0.957924 0.781089 2.2177e+08 0.00390742 5.34657e+07 4.61125e+08 5.38088e+07 298 5.41592e+07 6.40318e+07 0.0037803 5.37816e+07 49.8251 0.00210636 0.960277 0 50.1599 GTEX-1JJE9-0226-SM-CY8HU 2 B1 2 pieces; several small (<1mm) foci of lymphocytes 6.9 Thyroid Thyroid 0002046 1079 433 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989455 340730 0.964681 0.991351 0.7564 23897 1 76 0.00463219 137 0 7.39039e+07 0.0350198 424361 7.45487e+07 8.6865e+06 23926 3.67579e+07 0 0.208281 0.991351 0.749858 7.39039e+07 0.00756331 1.61312e+07 9.32447e+06 1.62521e+07 149 1.62787e+07 1.24473e+07 0.00609495 1.62443e+07 49.9472 0.0056924 0.993247 0 50.1867 GTEX-1JJE9-0326-SM-CL53Z 1 B1 6 pieces; well trimmed; dermal fat up to 10% 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1084 428 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991174 413891 0.969926 0.992896 0.730765 25326 1 76 0.00270338 230 0 1.00643e+08 0.0298448 487082 1.01363e+08 1.34404e+07 25381 5.00899e+07 0 0.239161 0.992896 0.725573 1.00643e+08 0.00408896 2.20245e+07 1.00464e+07 2.21471e+07 226 2.2188e+07 1.54609e+07 0.00339497 2.21506e+07 49.9578 0.00480531 0.994618 0 50.1388 GTEX-1JJE9-0426-SM-D4P2P 3 B1 2 pieces; 1 piece has 60% glands which are totally autolyzed; other is largely intact smooth muscle stroma with 10% autolyzed glands 6.3 Prostate Prostate 0002367 1087 425 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992045 167326 0.966986 0.993383 0.79439 25253 1 76 0.00253366 274 0 9.72296e+07 0.032771 2.91788e+06 9.78772e+07 1.23458e+07 25289 4.84296e+07 0 0.172595 0.993383 0.789134 9.72296e+07 0.00381753 2.12891e+07 1.17846e+07 2.17162e+07 319 2.16318e+07 1.32988e+07 0.00317473 2.15052e+07 49.8533 0.0298117 0.994722 0 50.4965 GTEX-1JJE9-0726-SM-CNPOH 2 B1 2 pieces; well trimmed; up to 20% internal fat; nerve fibers appear swollen 6 Nerve Nerve - Tibial 0001323 1100 412 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98434 192050 0.968207 0.987202 0.733089 24966 1 76 0.00559989 187 0 9.26224e+07 0.0315048 638302 9.38231e+07 2.29477e+07 25018 4.60331e+07 0 0.235118 0.987202 0.723707 9.26224e+07 0.00849483 2.03438e+07 1.01247e+07 2.04451e+07 189 2.05047e+07 1.305e+07 0.00704317 2.0536e+07 50.0382 0.00680325 0.990065 0 50.1241 GTEX-1JJE9-0926-SM-CNNP9 2 B1 2 pieces; severe congestion; large numbers of alveolar macrophages; patchy edema, hemorrhage and pneumonitis 5.8 Lung Lung 0008952 1105 407 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989556 197583 0.973125 0.991994 0.81048 23743 1 76 0.00252104 166 0 7.9973e+07 0.0266076 492730 8.06184e+07 9.03353e+06 23768 3.9783e+07 0 0.162645 0.991994 0.803991 7.9973e+07 0.00374214 1.75387e+07 1.0478e+07 1.77196e+07 197 1.77085e+07 1.3456e+07 0.00313009 1.77411e+07 50.046 0.00611188 0.994433 0 50.2566 GTEX-1JJE9-1226-SM-CNPOI 1 B1 2 pieces; <5% fibrous content 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1111 401 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.980124 189476 0.976404 0.98321 0.808627 23113 1 76 0.00589634 148 0 7.45151e+07 0.0232518 661397 7.57875e+07 1.96345e+07 23142 3.70185e+07 0 0.167777 0.98321 0.79505 7.45151e+07 0.00820821 1.63316e+07 1.02439e+07 1.65449e+07 160 1.6609e+07 1.24029e+07 0.00704865 1.64905e+07 49.821 0.00872699 0.986297 0 50.3244 GTEX-1JJE9-1426-SM-ARL8P 1 B1 2 pieces; 5% patchy fibrosis; up to 1.5mm pericardial fat 6.4 Heart Heart - Left Ventricle 0006566 1113 399 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.99174 341682 0.974871 0.991912 0.774272 21103 1 76 0.001844 110 0 5.15916e+07 0.0249223 1.3792e+06 5.20122e+07 3.69012e+06 21127 2.56548e+07 0 0.200599 0.991912 0.76801 5.15916e+07 0.00238563 1.15002e+07 1.17071e+07 1.15524e+07 127 1.16762e+07 7.46838e+06 0.00211477 1.13872e+07 49.3734 0.0265169 0.992085 0 50.1132 GTEX-1JJE9-1526-SM-CM2RR 1 B1 2 pieces; 10% fibrous content 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1115 397 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992957 197756 0.975673 0.994092 0.793345 23500 1 76 0.00205374 378 0 1.04844e+08 0.0240149 1.21511e+06 1.05467e+08 6.68267e+06 23533 5.22304e+07 0 0.182328 0.994092 0.788657 1.04844e+08 0.00258956 2.32295e+07 1.48687e+07 2.33775e+07 337 2.34194e+07 1.65517e+07 0.00232135 2.33076e+07 49.8804 0.0115212 0.995227 0 50.1587 GTEX-1JJE9-2226-SM-CXZJM 2 B1 6 pieces; autolyzed mucosa with residual lymphoid tissue comprising 20-50% 5.6 Small Intestine Small Intestine - Terminal Ileum 0001211 1131 381 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990325 130594 0.963495 0.991429 0.736617 24352 1 76 0.00240745 163 0 7.85987e+07 0.0361679 669557 7.92782e+07 6.00186e+06 24385 3.91351e+07 0 0.226878 0.991429 0.730304 7.85987e+07 0.00288321 1.70453e+07 9.92229e+06 1.7344e+07 180 1.72862e+07 1.18223e+07 0.00264507 1.71978e+07 49.8718 0.00844566 0.992532 0 50.4343 GTEX-1JJE9-2326-SM-ARL8Q 1 B1 2 pieces; gynecomastoid hyperplasia 6.4 Breast Breast - Mammary Tissue 0008367 1132 380 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991724 254721 0.977633 0.991806 0.83515 22333 1 76 0.00164009 142 0 5.5015e+07 0.0220313 297351 5.54695e+07 4.15861e+06 22354 2.73778e+07 0 0.142483 0.991806 0.828307 5.5015e+07 0.00220293 1.20877e+07 6.96830e+06 1.21359e+07 131 1.22101e+07 1.23038e+07 0.00192149 1.20236e+07 49.6151 0.00536062 0.991889 0 50.0994 GTEX-1JJE9-2426-SM-D3L8T 2 B1 6 pieces; autolyzed mucosa; intact muscularis 7.9 Colon Colon - Transverse 0001157 1136 376 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990273 256402 0.969839 0.992168 0.825201 23006 1 76 0.00258499 192 0 7.85755e+07 0.029889 1.21912e+06 7.91958e+07 8.23231e+06 23026 3.91128e+07 0 0.144638 0.992168 0.818738 7.85755e+07 0.0036052 1.69388e+07 1.01112e+07 1.71695e+07 204 1.71407e+07 1.24625e+07 0.00309412 1.71147e+07 49.9621 0.0153937 0.994062 0 50.3382 GTEX-1JJE9-2526-SM-ARU8K 1 B1 6 pieces; well dissected muscularis except for focal submucosal stroma 5.6 Colon Colon - Sigmoid 0001159 1140 372 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991964 200917 0.968745 0.993066 0.805598 21305 1 76 0.00194536 129 0 5.96791e+07 0.0310405 1.3209e+06 6.00958e+07 2.14449e+06 21319 2.97256e+07 0 0.163147 0.993066 0.800012 5.96791e+07 0.00283398 1.27493e+07 6.92035e+06 1.29115e+07 148 1.28831e+07 9.39086e+06 0.00238918 1.2844e+07 49.9241 0.0219799 0.994168 0 50.3161 GTEX-1JJE9-2626-SM-ARZMT 1 B1 6 pieces; well dissected skin; <1% dermal fat 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1153 359 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988317 374829 0.970399 0.990112 0.72703 22973 1 76 0.0024098 131 0 6.12057e+07 0.0294083 400330 6.1817e+07 2.74124e+06 23008 3.04043e+07 0 0.243369 0.990112 0.719841 6.12057e+07 0.00356498 1.34051e+07 7.03794e+06 1.36149e+07 135 1.37138e+07 9.00875e+06 0.00298634 1.34043e+07 49.4294 0.00647605 0.991908 0 50.3882 GTEX-1JJE9-2826-SM-CNNPB 2 B1 1 piece; outer rim of adeno- & neurohypophysis with large central stromal core 6.2 Pituitary Pituitary 0000007 1177 335 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410,LCSET-9785 09/04/2016 TruSeq.v1 RNASEQ 0.989577 1.83718e+06 0.961747 0.991017 0.76778 28702 1 76 0.00186449 525 0 2.4595e+08 0.0378953 2.09986e+06 2.48179e+08 1.30855e+07 28792 1.22081e+08 0 0.193968 0.991017 0.760883 2.4595e+08 0.00222137 5.2809e+07 2.85259e+07 5.28996e+07 550 5.33088e+07 3.60578e+07 0.00204267 5.27373e+07 49.7305 0.00846108 0.992457 0 50.0429 GTEX-1JJE9-2926-SM-CY8HV 1 B1 4 pieces 6.1 Brain Brain - Cortex 0001870 1185 327 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989548 379436 0.96928 0.992161 0.840978 21422 1 76 0.00434353 366 0 8.35957e+07 0.0305984 8.81272e+06 8.42562e+07 9.92398e+06 21431 4.15922e+07 0 0.128302 0.992161 0.834385 8.35957e+07 0.00780393 1.80444e+07 2.86365e+07 1.88907e+07 351 1.84435e+07 4.80895e+06 0.00606917 1.86239e+07 50.2433 0.104594 0.994774 0 51.1456 GTEX-1JJE9-3026-SM-CNNPA 1 B1 4 fragmented pieces 5.8 Brain Brain - Cerebellum 0002037 1188 324 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990418 153844 0.96039 0.99275 0.785138 22955 1 76 0.00240421 195 0 7.71855e+07 0.0394213 3.55651e+06 7.77491e+07 7.49828e+06 22977 3.84072e+07 0 0.175252 0.99275 0.779446 7.71855e+07 0.00361866 1.6799e+07 9.20687e+06 1.72925e+07 254 1.72315e+07 6.17156e+06 0.00301001 1.70141e+07 49.6827 0.0457434 0.995082 0 50.7239 GTEX-1JJEA-0003-SM-DE1IJ B1 Blood Whole Blood 0013756 935 BP-60388 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JJEA-0006-SM-DHXJ2 B1 8.4 Blood Whole Blood 0013756 935 BP-60387 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.98205 423217 0.981581 0.982838 0.801795 19773 1 76 0.00242724 201 0 1.12125e+08 0.0175842 283382 1.14083e+08 5.9425e+06 19789 5.58569e+07 0 0.179786 0.982838 0.788034 1.12125e+08 0.00299665 2.6122e+07 1.45272e+08 2.61912e+07 240 2.62236e+07 2.88794e+07 0.00271171 2.61843e+07 49.9625 0.002484 0.983625 0 50.0661 GTEX-1JJEA-0011-R11a-SM-EXUTE B1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 937 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991618 652262 0.96085 0.99279 0.820621 22173 1 76 0.00164275 162 0 6.44461e+07 0.0387634 2.01296e+06 6.49141e+07 1.98476e+06 22195 3.20744e+07 0 0.140229 0.99279 0.814705 6.44461e+07 0.00227403 1.40938e+07 6.17423e+06 1.42196e+07 193 1.42417e+07 7.94238e+06 0.00195802 1.41322e+07 49.8071 0.0310096 0.993962 0 50.222 GTEX-1JJEA-0011-R3b-SM-EXUTD B1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 937 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991915 536443 0.971196 0.99302 0.874505 22299 1 76 0.00150861 202 0 6.6971e+07 0.028371 3.61119e+06 6.74417e+07 1.98635e+06 22313 3.3346e+07 0 0.096691 0.99302 0.868402 6.6971e+07 0.0021177 1.47918e+07 7.43173e+06 1.50126e+07 227 1.49297e+07 8.50894e+06 0.00181281 1.49315e+07 50.0031 0.0535453 0.994126 0 50.3704 GTEX-1JJEA-0011-R4a-SM-EXUTC B1, A1 5.7 Brain Brain - Amygdala 0001876 937 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.987506 184504 0.981785 0.989048 0.877345 19120 1 76 0.00136569 266 0 6.29322e+07 0.0181279 9.99884e+06 6.3629e+07 2.13396e+06 19125 3.13351e+07 0 0.10444 0.989048 0.867736 6.29322e+07 0.00191624 1.38202e+07 1.54176e+07 1.44025e+07 286 1.40323e+07 2.99611e+06 0.00164054 1.42422e+07 50.3712 0.157143 0.99059 0 51.0317 GTEX-1JJEA-0011-R6a-SM-EXUS1 B1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 937 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991071 432975 0.972795 0.992185 0.866768 21869 1 76 0.00154642 369 0 7.96968e+07 0.0270083 7.10536e+06 8.03245e+07 2.04452e+06 21880 3.96992e+07 0 0.106027 0.992185 0.859995 7.96968e+07 0.00202332 1.73832e+07 1.61561e+07 1.79951e+07 350 1.77703e+07 6.60261e+06 0.0017846 1.76685e+07 49.8563 0.0884582 0.9933 0 50.8648 GTEX-1JJEA-0126-SM-D3L8A 0 B1 2 pieces, ~5% interstitial fat 7.7 Muscle Muscle - Skeletal 0011907 1107 980 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992456 285142 0.985016 0.994659 0.880314 20140 1 76 0.00220012 269 0 9.93673e+07 0.0147404 1.45195e+06 9.99008e+07 1.04709e+07 20152 4.94916e+07 0 0.104702 0.994659 0.875613 9.93673e+07 0.00317321 2.15576e+07 9.6474e+06 2.1951e+07 309 2.19721e+07 2.01804e+07 0.00268559 2.17223e+07 49.7142 0.0145339 0.996863 0 50.4521 GTEX-1JJEA-0226-SM-COH2X 0 B1 2 pieces, ~20% fascia/vascular elements 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1109 978 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991377 254273 0.973895 0.992881 0.802779 23014 1 76 0.00356069 155 0 7.20504e+07 0.0258052 631847 7.2567e+07 7.65029e+06 23035 3.58778e+07 0 0.171117 0.992881 0.797063 7.20504e+07 0.0044179 1.57143e+07 6.89604e+06 1.58202e+07 171 1.58146e+07 1.14411e+07 0.00398864 1.58225e+07 50.0126 0.00870708 0.994384 0 50.1679 GTEX-1JJEA-0326-SM-CNPOT 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50-60 microns 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1110 977 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985977 332140 0.974603 0.988726 0.811264 23059 1 76 0.00572568 181 0 7.93882e+07 0.0250183 250036 8.02935e+07 2.03196e+07 23091 3.94688e+07 0 0.163339 0.988726 0.802118 7.93882e+07 0.00805723 1.70379e+07 1.0936e+07 1.71121e+07 163 1.72005e+07 1.41567e+07 0.00688822 1.71566e+07 49.9361 0.00311403 0.991474 0 50.1087 GTEX-1JJEA-0426-SM-COH2Y 0 B1 2 pieces, partial fibrous rim up to ~0.5mm 7.3 Nerve Nerve - Tibial 0001323 1114 973 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991027 270155 0.967149 0.992477 0.760266 23722 1 76 0.00375678 157 0 7.3464e+07 0.032525 368160 7.40209e+07 8.2887e+06 23760 3.65743e+07 0 0.206883 0.992477 0.754546 7.3464e+07 0.00436865 1.61605e+07 7.29802e+06 1.62395e+07 164 1.62315e+07 1.11975e+07 0.00406227 1.62724e+07 50.0629 0.00497373 0.993926 0 50.1219 GTEX-1JJEA-0526-SM-D3L95 0 B1 2 pieces, minimal atherosis, rim of fibrous tissue up to ~1mm 7.4 Blood Vessel Artery - Tibial 0007610 1116 971 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989887 347574 0.970881 0.992089 0.787365 20867 1 76 0.00272972 127 0 5.75278e+07 0.0287917 255222 5.79865e+07 6.29384e+06 20887 2.86046e+07 0 0.183516 0.992089 0.781137 5.75278e+07 0.00390941 1.22973e+07 4.55843e+06 1.24006e+07 134 1.23944e+07 9.69577e+06 0.00331825 1.24236e+07 50.0587 0.0044014 0.994291 0 50.2091 GTEX-1JJEA-0626-SM-D3L96 1 B1 2 pieces, few fibrofatty nubbins up to 1.5mm, delineated 7.2 Thyroid Thyroid 0002046 1119 968 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990187 416802 0.96325 0.992389 0.720124 24985 1 76 0.0027721 162 0 8.45195e+07 0.0364632 341827 8.51678e+07 8.80497e+06 25036 4.20479e+07 0 0.243126 0.992389 0.714643 8.45195e+07 0.00395047 1.83833e+07 9.04615e+06 1.85176e+07 179 1.85634e+07 1.23341e+07 0.00335998 1.85125e+07 49.9313 0.00401357 0.99459 0 50.182 GTEX-1JJEA-0726-SM-CYPSN 1 B1 6 pieces, minimal atherosis 5.9 Blood Vessel Artery - Aorta 0001496 1121 966 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.99273 164101 0.970606 0.993427 0.704217 22967 1 76 0.00255525 125 0 6.04585e+07 0.0290347 220834 6.08585e+07 4.41617e+06 23002 3.01048e+07 0 0.266388 0.993427 0.699589 6.04585e+07 0.00313305 1.32396e+07 5.60356e+06 1.33069e+07 132 1.32785e+07 8.72878e+06 0.00284395 1.33134e+07 50.0657 0.00362865 0.994125 0 50.1268 GTEX-1JJEA-0826-SM-CL53T 1 B1 2 pieces, moderate interstitial fibrosis,/chronic ischemic changes 6.8 Heart Heart - Left Ventricle 0006566 1122 965 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.994003 354784 0.981502 0.995454 0.8453 21628 1 76 0.00229742 368 0 1.02668e+08 0.0183626 7.52469e+06 1.03137e+08 1.32724e+07 21645 5.11567e+07 0 0.136202 0.995454 0.841457 1.02668e+08 0.00331759 2.24848e+07 2.12393e+07 2.31944e+07 346 2.33886e+07 1.07783e+07 0.00280676 2.24188e+07 48.9414 0.0729582 0.996905 0 50.7767 GTEX-1JJEA-0926-SM-CYPSO 1 B1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 1123 964 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994618 228871 0.980321 0.995362 0.787965 21201 1 76 0.00202781 153 0 7.17169e+07 0.0194357 1.82095e+06 7.2051e+07 4.75325e+06 21223 3.57646e+07 0 0.192355 0.995362 0.784311 7.17169e+07 0.00255239 1.55385e+07 7.50053e+06 1.57093e+07 189 1.56638e+07 9.39918e+06 0.0022899 1.56287e+07 49.9438 0.0252731 0.996106 0 50.2734 GTEX-1JJEA-1126-SM-CKZOC 1 B1 2 pieces, mild congestion, well-preserved bronchial mucosa, delineated. 5.6 Lung Lung 0008952 1128 959 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.988989 242239 0.968971 0.991177 0.701712 24616 1 76 0.00244037 146 0 7.657e+07 0.030744 514015 7.72516e+07 7.80901e+06 24654 3.80878e+07 0 0.267259 0.991177 0.695521 7.657e+07 0.00377743 1.68214e+07 8.60852e+06 1.6948e+07 167 1.69872e+07 9.76551e+06 0.00310743 1.69389e+07 49.9287 0.00665378 0.993366 0 50.1873 GTEX-1JJEA-1526-SM-CNNPK 1 B1 2 pieces, ~60-70% micro (predominately)/macrovesicular steatosis, mild chronic hepatitis 6.5 Liver Liver 0001114 1133 954 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99306 298468 0.974927 0.994831 0.83254 22966 1 76 0.00233724 268 0 1.08745e+08 0.0249026 1.46262e+06 1.0931e+08 1.14299e+07 22994 5.41736e+07 0 0.142387 0.994831 0.828236 1.08745e+08 0.00324428 2.33543e+07 1.49096e+07 2.38055e+07 329 2.37946e+07 1.76164e+07 0.00278996 2.35249e+07 49.715 0.0133805 0.996601 0 50.4784 GTEX-1JJEA-1826-SM-ARU8P 0 B1 6 pieces, no dermal fat; squamous epithelium is ~50-60 microns 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1139 948 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991396 273878 0.976867 0.992635 0.791795 21803 1 76 0.00212588 150 0 6.76654e+07 0.0229056 390396 6.81675e+07 2.3573e+06 21827 3.37096e+07 0 0.185072 0.992635 0.785963 6.76654e+07 0.00298144 1.48106e+07 7.85483e+06 1.48898e+07 160 1.49125e+07 1.12008e+07 0.00255313 1.48664e+07 49.9227 0.00572701 0.993873 0 50.1335 GTEX-1JJEA-1926-SM-AHZ41 2 B1 2 pieces, markedly decreased spermatogenesis 8.4 Testis Testis 0000473 1142 945 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132,LCSET-8324 01/08/2016 TruSeq.v1 RNASEQ 0.989001 281642 0.929572 0.991041 0.712908 31650 1 76 0.00200649 118 0 5.47995e+07 0.0701352 462325 5.52949e+07 2.06332e+06 31697 2.72771e+07 0 0.216664 0.991041 0.706521 5.47995e+07 0.00277963 1.14756e+07 6.75414e+06 1.15217e+07 113 1.15676e+07 8.53032e+06 0.00239226 1.15284e+07 49.915 0.00836108 0.993081 0 50.1002 GTEX-1JJEA-2526-SM-CY8HJ 1 B1 6 pieces, confirmed target muscularis 6.4 Colon Colon - Sigmoid 0001159 1159 928 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990514 279283 0.971365 0.992262 0.816002 22456 1 76 0.00464664 147 0 7.51554e+07 0.028413 839481 7.57415e+07 8.87967e+06 22474 3.73988e+07 0 0.155364 0.992262 0.809688 7.51554e+07 0.00730311 1.5968e+07 6.89484e+06 1.61389e+07 168 1.60971e+07 1.21653e+07 0.00597254 1.61379e+07 50.0632 0.0110835 0.99401 0 50.2661 GTEX-1JJEA-2726-SM-ARL8V 1 B1 2 pieces, prominent stromal and ductal (delineated) hyperplasia 8.7 Breast Breast - Mammary Tissue 0008367 1167 920 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.989592 305272 0.973387 0.989542 0.822112 22269 1 76 0.00186946 132 0 5.02359e+07 0.0262477 305328 5.07669e+07 5.25533e+06 22289 2.49611e+07 0 0.151275 0.989542 0.813514 5.02359e+07 0.00242588 1.10347e+07 6.46074e+06 1.11262e+07 122 1.12824e+07 1.04477e+07 0.00214768 1.08831e+07 49.0993 0.00601432 0.989492 0 50.2065 GTEX-1JJEA-2826-SM-ARU8R 1 B1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 1224 863 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993754 337067 0.966079 0.994844 0.831285 23432 1 76 0.00184141 267 0 8.4114e+07 0.0336437 4.36472e+06 8.455e+07 2.90819e+06 23452 4.19364e+07 0 0.134794 0.994844 0.826999 8.4114e+07 0.00227479 1.82909e+07 1.8863e+07 1.86869e+07 299 1.85273e+07 8.29277e+06 0.00205786 1.8514e+07 49.982 0.051623 0.995933 0 50.5354 GTEX-1JJEA-2926-SM-C1YSK 1 B1 4 pieces, no abnormalities 7.5 Brain Brain - Cerebellum 0002037 1225 862 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989791 516977 0.952704 0.99224 0.740969 23728 1 76 0.0019914 200 0 8.36933e+07 0.0469163 1.32864e+06 8.43478e+07 3.64615e+06 23758 4.16179e+07 0 0.211735 0.99224 0.735219 8.36933e+07 0.00238516 1.81047e+07 9.65579e+06 1.83119e+07 226 1.83402e+07 1.02921e+07 0.0021878 1.82509e+07 49.878 0.0157519 0.994689 0 50.2844 GTEX-1JJEA-3026-SM-E9TIC 1 B1 1 piece, adenohypophysis, rim of dura up to ~0.7mm 7.1 Pituitary Pituitary 0000007 1229 858 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.99071 506812 0.961829 0.991973 0.747491 28411 1 76 0.00203526 282 0 1.6043e+08 0.037878 1.10349e+06 1.61728e+08 8.76258e+06 28475 7.9913e+07 0 0.214338 0.991973 0.741491 1.6043e+08 0.00255531 3.45471e+07 2.0632e+07 3.47628e+07 325 3.46941e+07 2.35254e+07 0.00229495 3.47969e+07 50.0739 0.00682316 0.993237 0 50.1556 GTEX-1JK1U-0001-SM-DE1IM B1 Blood Whole Blood 0013756 -99 BP-60388 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/10/2015 LCSET-10232,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1JK1U-0006-SM-DHXJ3 B1 9.4 Blood Whole Blood 0013756 -99 BP-60387 RNA isolation_PAXgene Blood RNA (Manual) 02/10/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991624 697169 0.966456 0.992619 0.809972 19236 1 76 0.00248714 271 0 1.0759e+08 0.0329719 378659 1.0839e+08 5.96557e+06 19252 5.36034e+07 0 0.156484 0.992619 0.803993 1.0759e+08 0.00269572 2.38542e+07 5.51497e+07 2.40836e+07 275 2.40973e+07 2.37685e+07 0.00259133 2.39496e+07 49.8462 0.00349348 0.993614 0 50.2393 GTEX-1JK1U-0126-SM-C1YQY 1 B1 2 pieces, no abnormalities 7.2 Spleen Spleen 0002106 129 542 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.983445 774519 0.95992 0.986208 0.761326 24067 1 76 0.00344808 192 0 8.82379e+07 0.0353102 565632 8.94719e+07 4.30716e+06 24099 4.36332e+07 0 0.198594 0.986208 0.750826 8.82379e+07 0.00400982 1.9438e+07 1.96552e+07 1.95525e+07 207 1.96625e+07 1.18572e+07 0.00372816 1.95526e+07 49.8599 0.0063219 0.988971 0 50.1468 GTEX-1JK1U-0226-SM-ARZMX 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 130 541 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987868 636322 0.967156 0.990058 0.789542 22156 1 76 0.00248982 154 0 6.2119e+07 0.0326177 318702 6.27428e+07 2.78461e+06 22181 3.08293e+07 0 0.177614 0.990058 0.781693 6.2119e+07 0.00365226 1.34421e+07 9.32049e+06 1.36063e+07 143 1.37758e+07 1.04328e+07 0.00306976 1.33971e+07 49.3031 0.0050795 0.992248 0 50.3035 GTEX-1JK1U-0326-SM-CXZJH 1 B1 2 pieces few foci of lymphocytic (Hashimoto) thyroiditis, rep delineated 7.1 Thyroid Thyroid 0002046 132 539 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.99233 286213 0.96882 0.993821 0.77217 25173 1 76 0.00251913 208 0 9.52882e+07 0.0297477 340535 9.58807e+07 6.57524e+06 25219 4.74156e+07 0 0.19665 0.993821 0.767399 9.52882e+07 0.00319359 2.08254e+07 1.02932e+07 2.12364e+07 230 2.12439e+07 1.49611e+07 0.00285585 2.09546e+07 49.6572 0.00355165 0.995313 0 50.4886 GTEX-1JK1U-0426-SM-CYPSP 1 B1 2 pieces, atherosis up to ~0.7mm 7.1 Blood Vessel Artery - Aorta 0001496 141 530 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993867 508517 0.976973 0.994606 0.841965 21924 1 76 0.00211718 211 0 8.5971e+07 0.0226063 184279 8.64373e+07 5.97387e+06 21947 4.28618e+07 0 0.135008 0.994606 0.837423 8.5971e+07 0.00259296 1.86674e+07 5.88532e+06 1.87983e+07 209 1.87636e+07 1.72938e+07 0.00235489 1.87663e+07 50.0036 0.00213194 0.995345 0 50.1747 GTEX-1JK1U-0526-SM-CYPSQ 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic changes 8.3 Heart Heart - Left Ventricle 0006566 158 513 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.99534 353602 0.98631 0.996314 0.878721 20493 1 76 0.00222849 269 0 1.11375e+08 0.0134319 2.38926e+06 1.11787e+08 8.10576e+06 20505 5.55442e+07 0 0.107589 0.996314 0.875482 1.11375e+08 0.00284538 2.46349e+07 1.9219e+07 2.48297e+07 326 2.47308e+07 1.79428e+07 0.00253663 2.48187e+07 50.0886 0.0213733 0.997287 0 50.1969 GTEX-1JK1U-0626-SM-CKZOJ 1 B1 2 pieces, no abnormalities 8.7 Heart Heart - Atrial Appendage 0006631 168 503 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.992554 425375 0.980796 0.994644 0.848138 22712 1 76 0.00206751 373 0 1.30054e+08 0.0189453 2.91946e+06 1.30754e+08 1.22055e+07 22736 6.47843e+07 0 0.132658 0.994644 0.843596 1.30054e+08 0.00332698 2.80533e+07 2.61634e+07 2.84609e+07 345 2.84456e+07 1.88419e+07 0.00269592 2.82834e+07 49.8571 0.0223279 0.996734 0 50.3606 GTEX-1JK1U-0726-SM-C1YPZ 1 B1 2 pieces, spermatogenesis present, appears reduced 7.7 Testis Testis 0000473 172 499 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987451 1.10307e+06 0.934553 0.990155 0.724944 33845 1 76 0.00196276 220 0 1.00907e+08 0.0651168 743126 1.0191e+08 4.69378e+06 33925 5.01624e+07 0 0.209609 0.990155 0.717807 1.00907e+08 0.00236467 2.12902e+07 1.25967e+07 2.13672e+07 233 2.15592e+07 1.70196e+07 0.00216316 2.13303e+07 49.7331 0.00729199 0.992858 0 50.0903 GTEX-1JK1U-0826-SM-CM2S1 1 B1 2 pieces, subtotally occlusive (~80%) calcifying atherosis, rep delineated 5.9 Blood Vessel Artery - Coronary 0001621 185 486 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993932 248806 0.972221 0.995095 0.821941 22597 1 76 0.00196292 375 0 1.06657e+08 0.0274748 473629 1.07183e+08 6.45587e+06 22621 5.31401e+07 0 0.15028 0.995095 0.81791 1.06657e+08 0.00263593 2.31069e+07 8.19658e+06 2.3207e+07 331 2.31611e+07 1.86324e+07 0.00229903 2.32691e+07 50.1163 0.00441888 0.996259 0 50.108 GTEX-1JK1U-0926-SM-AHZ43 1 B1 2 pieces, diffuse suppurative/acute prostatitis, rep foci delineated 8 Prostate Prostate 0002367 177 494 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.989947 258073 0.97026 0.991358 0.764523 25011 1 76 0.00498582 148 0 7.57312e+07 0.0294548 218140 7.63914e+07 9.19885e+06 25044 3.77051e+07 0 0.205737 0.991358 0.757915 7.57312e+07 0.00608097 1.66388e+07 7.59735e+06 1.67644e+07 150 1.67488e+07 1.27157e+07 0.00553261 1.67555e+07 50.0099 0.00285556 0.992768 0 50.1881 GTEX-1JK1U-1026-SM-AHZ44 1 B1 2 pieces, islets well-preserved (rep encircled). Fibrosis and ductal proliferations consistent with remote pancreatitis, rep. ensquared. 7.6 Pancreas Pancreas 0001150 178 493 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989689 393020 0.97932 0.991107 0.843877 23952 1 76 0.00639997 166 0 1.10075e+08 0.0204157 280458 1.11063e+08 1.71818e+07 23983 5.48082e+07 0 0.135443 0.991107 0.836373 1.10075e+08 0.00828435 2.51595e+07 2.19415e+07 2.53159e+07 179 2.53232e+07 2.85791e+07 0.00734081 2.5306e+07 49.983 0.00252522 0.992526 0 50.1549 GTEX-1JK1U-1126-SM-CY8HK 1 B1 2 pieces, mild congestion; well preserved bronchial mucosa; rep foci delineated. Foci of bronchial metaplasia noted 8.6 Lung Lung 0008952 188 483 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99009 540093 0.976262 0.992149 0.817884 24755 1 76 0.00452557 215 0 1.04891e+08 0.0232966 366523 1.05721e+08 1.15409e+07 24800 5.21949e+07 0 0.158378 0.992149 0.811463 1.04891e+08 0.00778017 2.33391e+07 8.59409e+06 2.34668e+07 252 2.35543e+07 2.03618e+07 0.00614949 2.34544e+07 49.8937 0.00346688 0.994208 0 50.1364 GTEX-1JK1U-1226-SM-CNNPN 1 B1 6 pieces, ~20% target lymphoid aggregates, rep delineated 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 195 476 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991851 278068 0.974412 0.993587 0.801052 25624 1 76 0.00262979 278 0 1.2191e+08 0.0248494 782511 1.22697e+08 1.29328e+07 25668 6.07057e+07 0 0.17336 0.993587 0.795915 1.2191e+08 0.00352706 2.70124e+07 1.4546e+07 2.73228e+07 327 2.73166e+07 1.83568e+07 0.00307764 2.7209e+07 49.9013 0.0063776 0.995324 0 50.2857 GTEX-1JK1U-1326-SM-AHZ45 1 B1 6 pieces, mucosa well preserved, up to ~1mm, patchy microcystic glandular metapasia/gastropathy, rep. foci encircled 6.5 Stomach Stomach 0000945 205 466 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.98832 197510 0.981585 0.989799 0.855324 22169 1 76 0.00538484 258 0 8.44262e+07 0.0181631 1.58691e+06 8.52963e+07 1.1212e+07 22182 4.20471e+07 0 0.126261 0.989799 0.846599 8.44262e+07 0.00672143 1.89572e+07 4.40865e+07 1.93993e+07 231 1.92667e+07 1.51246e+07 0.00605213 1.91929e+07 49.904 0.0186046 0.991278 0 50.5763 GTEX-1JK1U-1426-SM-CNPOW 1 B1 6 pieces, confirmed target muscularis 7.8 Colon Colon - Sigmoid 0001159 203 468 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986558 332054 0.975652 0.989067 0.8335 23911 1 76 0.00569079 281 0 1.06955e+08 0.0240627 701813 1.08137e+08 2.75101e+07 23941 5.32105e+07 0 0.142152 0.989067 0.824388 1.06955e+08 0.00778023 2.32023e+07 1.18891e+07 2.34757e+07 290 2.35464e+07 1.80764e+07 0.00673286 2.33776e+07 49.8201 0.00649004 0.991577 0 50.2929 GTEX-1JK1U-1526-SM-AHZ46 1 B1 6 pieces, well preserved mucosa up to ~0.25mm 7 Colon Colon - Transverse 0001157 205 466 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988638 294999 0.975646 0.990127 0.816684 24905 1 76 0.0068468 282 0 1.14288e+08 0.0238642 1.84891e+06 1.15428e+08 1.93103e+07 24948 5.68852e+07 0 0.158962 0.990127 0.808621 1.14288e+08 0.00875396 2.52501e+07 1.80861e+07 2.55531e+07 314 2.54511e+07 1.48554e+07 0.00779894 2.54843e+07 50.0326 0.0160179 0.991617 0 50.2982 GTEX-1JK1U-1626-SM-CY8HL 1 B1 6 pieces, confirmed target muscularis 8.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 206 465 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.991389 490349 0.976908 0.993166 0.844557 23383 1 76 0.00444849 213 0 9.07249e+07 0.0226665 536764 9.13491e+07 9.7894e+06 23408 4.51582e+07 0 0.132351 0.993166 0.838785 9.07249e+07 0.00710737 1.98518e+07 7.27019e+06 2.00332e+07 207 2.00408e+07 1.68286e+07 0.00577555 1.9991e+07 49.9378 0.00587596 0.994943 0 50.2274 GTEX-1JK1U-1726-SM-CNNPM 1 B1 6 pieces squamous mucosa up to ~0.4mm, ~15% of thckness. Submucosal mucus glands present, rep.delineated 9.8 Esophagus Esophagus - Mucosa 0006920 209 462 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990402 465277 0.977595 0.992247 0.838729 24271 1 76 0.00236527 289 0 1.33205e+08 0.0219089 484060 1.34246e+08 1.47308e+07 24302 6.63443e+07 0 0.138866 0.992247 0.832227 1.33205e+08 0.00350269 2.99364e+07 2.16123e+07 3.01783e+07 321 3.0263e+07 2.86719e+07 0.00293292 3.00817e+07 49.8498 0.00360577 0.994093 0 50.2012 GTEX-1JK1U-1826-SM-ARL8W 1 B1 2 pieces, gynecomastoid stromal and ductal (rep encircled) hyperplasia 6.5 Breast Breast - Mammary Tissue 0008367 214 457 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.990786 1.21140e+06 0.962032 0.991009 0.704678 24188 1 76 0.0021097 135 0 6.5958e+07 0.0376954 210176 6.65564e+07 4.85389e+06 24227 3.27456e+07 0 0.257354 0.991009 0.698342 6.5958e+07 0.0025679 1.45595e+07 7.18363e+06 1.43653e+07 137 1.48658e+07 9.48524e+06 0.00233875 1.40728e+07 48.6298 0.00315786 0.991232 0 49.6642 GTEX-1JK1U-1926-SM-CJI38 1 B1 6 pieces, confirmed target muscularis 8.8 Esophagus Esophagus - Muscularis 0004648 216 455 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993807 963774 0.978152 0.994729 0.848378 22946 1 76 0.00200318 384 0 1.1614e+08 0.0215128 800800 1.16755e+08 7.15178e+06 22972 5.78624e+07 0 0.129775 0.994729 0.843905 1.1614e+08 0.00226235 2.52528e+07 1.0873e+07 2.55578e+07 343 2.56206e+07 2.1842e+07 0.00213265 2.52856e+07 49.671 0.0068588 0.99565 0 50.3001 GTEX-1JK1U-2026-SM-CM2RZ 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~35 microns 8.7 Skin Skin - Sun Exposed (Lower leg) 0004264 281 390 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993209 372121 0.972141 0.994637 0.797001 23957 1 76 0.00200543 253 0 8.83862e+07 0.0275805 333981 8.88628e+07 5.33519e+06 23988 4.40233e+07 0 0.175141 0.994637 0.792726 8.83862e+07 0.0027379 1.92549e+07 8.16942e+06 1.93029e+07 219 1.93721e+07 1.60029e+07 0.00237114 1.93073e+07 49.9163 0.00375839 0.996065 0 50.0623 GTEX-1JK1U-2126-SM-CNPOU 0 B1 2 pieces, ~30% fascia/vascular elements 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 287 384 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985813 293332 0.978693 0.988701 0.850904 23175 1 76 0.00573258 175 0 9.03811e+07 0.0209642 571513 9.14139e+07 2.37044e+07 23196 4.49402e+07 0 0.127789 0.988701 0.84129 9.03811e+07 0.00823224 1.97764e+07 9.57767e+06 2.00359e+07 199 2.00991e+07 1.66737e+07 0.00697876 1.99604e+07 49.8269 0.00625193 0.991589 0 50.326 GTEX-1JK1U-2226-SM-CNNPL 0 B1 2 pieces, ~5% interstitial fat; rep delineated 8.7 Muscle Muscle - Skeletal 0011907 293 378 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993011 370017 0.985276 0.994823 0.890486 20737 1 76 0.00218002 406 0 1.38061e+08 0.0144854 2.21287e+06 1.3878e+08 1.47362e+07 20746 6.87967e+07 0 0.0947901 0.994823 0.885876 1.38061e+08 0.00308551 3.00924e+07 1.59289e+07 3.04504e+07 342 3.0436e+07 2.86127e+07 0.00263195 3.03222e+07 49.9064 0.0159452 0.996635 0 50.2957 GTEX-1JK1U-2326-SM-CNPOV 0 B1 2 pieces, ~40% occlusive atherosis, rep delineated, no adherent fat 7.5 Blood Vessel Artery - Tibial 0007610 297 374 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985145 312257 0.974674 0.988115 0.80997 23220 1 76 0.00582948 212 0 9.7453e+07 0.024954 287637 9.86251e+07 2.61956e+07 23249 4.84363e+07 0 0.164704 0.988115 0.800344 9.7453e+07 0.00862345 2.10294e+07 8.81815e+06 2.12143e+07 209 2.1296e+07 1.77369e+07 0.00722227 2.12209e+07 49.9117 0.00291647 0.991084 0 50.2188 GTEX-1JK1U-2426-SM-CYPSR 0 B1 2 pieces, trace partial rim of adherent fat up to ~0.3mm 6.8 Nerve Nerve - Tibial 0001323 295 376 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994328 339083 0.970811 0.995088 0.760339 24174 1 76 0.00231298 222 0 9.30734e+07 0.0288851 197326 9.35328e+07 6.69069e+06 24215 4.63999e+07 0 0.210472 0.995088 0.756604 9.30734e+07 0.00269829 2.05575e+07 8.22875e+06 2.06926e+07 229 2.06755e+07 1.60557e+07 0.00250549 2.06459e+07 49.9641 0.0021097 0.995847 0 50.1637 GTEX-1JK1U-5007-SM-AN487 B1 Lung Lung 0008952 187 ChIP-Seq GTEX-1JK1U-5019-SM-AN488 B1 Muscle Muscle - Skeletal 0011907 293 ChIP-Seq GTEX-1JKYN-0004-SM-ANILP B1 Blood Whole Blood 0013756 -215 BP-60475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/13/2015 LCSET-8330 12/21/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1JKYN-0004-SM-AYROE B1 Blood Whole Blood 0013756 -215 BP-60475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/13/2015 LCSET-8653 03/25/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JKYN-0006-SM-DHXJ5 B1 8.7 Blood Whole Blood 0013756 -215 BP-60520 RNA isolation_PAXgene Blood RNA (Manual) 02/13/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.986671 500313 0.975494 0.987594 0.818412 19534 1 76 0.00237151 190 0 1.03292e+08 0.0237146 221736 1.04589e+08 5.62748e+06 19544 5.1454e+07 0 0.157082 0.987594 0.808259 1.03292e+08 0.00279568 2.38923e+07 1.08875e+08 2.40962e+07 207 2.40814e+07 2.70124e+07 0.0025834 2.40118e+07 49.9277 0.00212007 0.988518 0 50.2125 GTEX-1JKYN-0126-SM-AHZ4C 1 B1 2 pieces; predominantly adrenal cortex, trivial component of attached fat 8.7 Adrenal Gland Adrenal Gland 0002369 95 795 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.991458 294505 0.979424 0.992868 0.827347 22441 1 76 0.00499764 201 0 8.66108e+07 0.0201058 1.09653e+06 8.72329e+07 1.08824e+07 22465 4.31297e+07 0 0.152077 0.992868 0.821447 8.66108e+07 0.00627117 1.91735e+07 1.0068e+07 1.93361e+07 218 1.93276e+07 1.49276e+07 0.0056335 1.92803e+07 49.9388 0.0125702 0.994279 0 50.2111 GTEX-1JKYN-0226-SM-ARL9H 1 B1 6 pieces; mild plaque 6.4 Blood Vessel Artery - Aorta 0001496 98 792 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992609 787257 0.969693 0.992644 0.78478 21219 1 76 0.00179709 133 0 6.23323e+07 0.0299703 308287 6.27942e+07 4.35919e+06 21245 3.09835e+07 0 0.184913 0.992644 0.779007 6.23323e+07 0.00232209 1.35334e+07 5.73513e+06 1.35389e+07 144 1.37878e+07 1.04884e+07 0.00205958 1.3286e+07 49.0733 0.00490948 0.992678 0 50.0101 GTEX-1JKYN-0326-SM-AHZ4D 0 B1 2 pieces 7.8 Spleen Spleen 0002106 100 790 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988395 275887 0.965341 0.989957 0.771932 24492 1 76 0.00674725 139 0 8.06149e+07 0.0338738 457012 8.14327e+07 1.27799e+07 24522 4.01e+07 0 0.193409 0.989957 0.764179 8.06149e+07 0.00866675 1.771e+07 9.96728e+06 1.78102e+07 154 1.77919e+07 1.27062e+07 0.00770549 1.78455e+07 50.0752 0.00561214 0.991519 0 50.1409 GTEX-1JKYN-0426-SM-CGQG2 1 B1 2 pieces; acute pancreatitis 8.2 Pancreas Pancreas 0001150 102 788 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993621 1.176e+06 0.979274 0.995435 0.849045 25745 1 76 0.00340053 384 0 2.24443e+08 0.0203736 607735 2.25472e+08 1.50943e+07 25791 1.11833e+08 0 0.130228 0.995435 0.84517 2.24443e+08 0.00344961 5.08276e+07 3.97899e+07 5.07153e+07 385 5.12617e+07 5.61306e+07 0.00342369 5.06231e+07 49.6866 0.00269539 0.99725 0 49.9447 GTEX-1JKYN-0526-SM-CGQG3 0 B1 2 pieces 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 103 787 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993419 782223 0.977959 0.99509 0.814615 25731 1 76 0.00353071 527 0 1.87046e+08 0.0217768 1.77554e+06 1.87969e+08 1.23035e+07 25783 9.32245e+07 0 0.163344 0.99509 0.810615 1.87046e+08 0.0035859 4.13967e+07 1.87411e+07 4.17584e+07 434 4.17579e+07 3.11965e+07 0.00355677 4.16318e+07 49.9244 0.00944592 0.99676 0 50.2175 GTEX-1JKYN-0726-SM-ARZMY 0 B1 2 pieces; 1 is predominantly fat with <10% fibrous component, 2nd is predominantly stroma with scattered ducts with mild hyperplasia, bundles of smooth muscle, and ~15% fat 7 Breast Breast - Mammary Tissue 0008367 139 751 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988135 578897 0.971346 0.990286 0.782448 21943 1 76 0.00242125 135 0 6.14166e+07 0.0283769 528199 6.2019e+07 2.94356e+06 21966 3.04772e+07 0 0.188898 0.990286 0.774847 6.14166e+07 0.00360227 1.33254e+07 7.26471e+06 1.35652e+07 142 1.37627e+07 9.78415e+06 0.00301048 1.32408e+07 49.0336 0.00851672 0.992438 0 50.4458 GTEX-1JKYN-0826-SM-ARU8S 0 B1 6 pieces; well trimmed, up to 10% internal fat, hair-bearing skin 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 143 747 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.988878 156022 0.97033 0.989997 0.776037 22297 1 76 0.00208673 122 0 5.16689e+07 0.0294981 634272 5.21909e+07 1.92149e+06 22316 2.57531e+07 0 0.194294 0.989997 0.768274 5.16689e+07 0.00275746 1.13932e+07 5.23679e+06 1.15273e+07 128 1.14891e+07 7.26595e+06 0.00242171 1.14848e+07 49.9906 0.0121529 0.991117 0 50.2925 GTEX-1JKYN-0926-SM-AHZ47 1 B1 2 pieces; good admixture of glands/stroma 7.7 Prostate Prostate 0002367 156 734 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.989883 454594 0.966448 0.991156 0.7804 26181 1 76 0.00687672 278 0 1.15009e+08 0.0331317 454828 1.16036e+08 2.02814e+07 26229 5.72477e+07 0 0.186048 0.991156 0.773498 1.15009e+08 0.00831009 2.50993e+07 1.51286e+07 2.53573e+07 282 2.53151e+07 1.80044e+07 0.00759249 2.52748e+07 49.9602 0.00391973 0.992428 0 50.2556 GTEX-1JKYN-1026-SM-CGQG4 0 B1 2 pieces; decreased sperm maturation 7.6 Testis Testis 0000473 168 722 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992284 1.23844e+06 0.956868 0.994099 0.750629 35165 1 76 0.00360897 382 0 2.32835e+08 0.0428598 3.98854e+06 2.34217e+08 1.55637e+07 35292 1.16005e+08 0 0.206239 0.994099 0.746199 2.32835e+08 0.0035479 5.09217e+07 2.66743e+07 5.1178e+07 403 5.12755e+07 3.30959e+07 0.00358016 5.11294e+07 49.9286 0.0170293 0.995914 0 50.1255 GTEX-1JKYN-1126-SM-CGQG5 1 B1 2 pieces; mild nodular hyperplasia 7.8 Thyroid Thyroid 0002046 170 720 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99285 856478 0.973049 0.994786 0.798737 26616 1 76 0.00348362 384 0 2.13217e+08 0.0266213 673835 2.14335e+08 1.49014e+07 26686 1.06232e+08 0 0.174312 0.994786 0.794572 2.13217e+08 0.00369553 4.70077e+07 2.06893e+07 4.72644e+07 405 4.73397e+07 3.78292e+07 0.00358366 4.72414e+07 49.9481 0.00314384 0.996722 0 50.1362 GTEX-1JKYN-1226-SM-CGQG8 0 B1 2 pieces; adipose tissue with ~10% fibrous component, some tissue defects 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 172 718 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.989945 684275 0.973694 0.991651 0.793813 25451 1 76 0.00365132 383 0 1.65553e+08 0.0260258 1.10685e+06 1.66947e+08 1.17741e+07 25507 8.24687e+07 0 0.179881 0.991651 0.787186 1.65553e+08 0.00367242 3.63832e+07 1.61039e+07 3.66143e+07 417 3.6602e+07 2.57796e+07 0.00366129 3.66118e+07 50.0067 0.00662993 0.993358 0 50.1583 GTEX-1JKYN-1326-SM-CGQG9 0 B1 6 pieces; mostly well trimmed with minimal internal/external fat, 1 with ~10% attached fat, epidermis measures 41 microns 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 183 707 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992807 896169 0.973535 0.994676 0.801535 27524 1 76 0.00362149 558 0 2.02453e+08 0.0261536 1.08269e+06 2.03537e+08 1.40112e+07 27601 1.00854e+08 0 0.172 0.994676 0.797268 2.02453e+08 0.00374236 4.43022e+07 1.96164e+07 4.46262e+07 460 4.46641e+07 3.42742e+07 0.00367857 4.45621e+07 49.9429 0.00531936 0.996544 0 50.1822 GTEX-1JKYN-1526-SM-CGQGA 0 B1 6 pieces; intact with prominent muscularis mucosae, rare cluster of submucosal glands 8.8 Esophagus Esophagus - Mucosa 0006920 186 704 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992898 605709 0.978515 0.994792 0.838829 23654 1 76 0.00359318 384 0 1.26977e+08 0.0210839 723900 1.27641e+08 8.7352e+06 23690 6.32577e+07 0 0.139686 0.994792 0.834461 1.26977e+08 0.00376927 2.85522e+07 1.55078e+07 2.87533e+07 358 2.88241e+07 2.45536e+07 0.00367633 2.86794e+07 49.8742 0.00567136 0.996687 0 50.1755 GTEX-1JKYN-1626-SM-ARU8T 1 B1 6 pieces; target muscularis, small attachments of submucosa/adventitia 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 188 702 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992901 298968 0.974896 0.994056 0.808934 21869 1 76 0.00183273 174 0 7.46041e+07 0.0248525 667802 7.50502e+07 2.2771e+06 21894 3.71851e+07 0 0.165962 0.994056 0.804126 7.46041e+07 0.00259749 1.62389e+07 7.20693e+06 1.64173e+07 191 1.63774e+07 1.19463e+07 0.00221467 1.63547e+07 49.9653 0.00889807 0.995212 0 50.273 GTEX-1JKYN-1726-SM-AHZ48 1 B1 8 pieces; variable representation of mucosa, submucosa, and muscularis; dilated deep glands, moderate acute gastritis 9.1 Stomach Stomach 0000945 189 701 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.984557 293867 0.981648 0.985936 0.859331 23908 1 76 0.00682479 342 0 1.05534e+08 0.0176561 516025 1.07039e+08 1.95294e+07 23929 5.25142e+07 0 0.122317 0.985936 0.847246 1.05534e+08 0.0085155 2.39767e+07 6.92393e+07 2.4358e+07 266 2.42665e+07 2.59681e+07 0.00766896 2.4203e+07 49.9346 0.0048209 0.987316 0 50.3945 GTEX-1JKYN-1826-SM-ARZMZ 0 B1 2 pieces; skeletal muscle with <10% fat/fibrous component 6.9 Muscle Muscle - Skeletal 0011907 188 702 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985692 798642 0.984022 0.988417 0.863361 17369 1 76 0.00229211 131 0 5.32051e+07 0.0157914 977751 5.38286e+07 2.6435e+06 17377 2.63327e+07 0 0.120661 0.988417 0.853361 5.32051e+07 0.00365719 1.1417e+07 1.45187e+07 1.16864e+07 137 1.19377e+07 9.73922e+06 0.00297277 1.12737e+07 48.5699 0.0181642 0.991142 0 50.5829 GTEX-1JKYN-1926-SM-CMKH1 1 B1 2 pieces; includes 20 and 40% internal/external fat 7.9 Nerve Nerve - Tibial 0001323 203 687 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993616 898463 0.971354 0.995017 0.776607 28394 1 76 0.00326772 549 0 2.60943e+08 0.0283243 1.15448e+06 2.6225e+08 1.85996e+07 28492 1.30038e+08 0 0.194747 0.995017 0.772737 2.60943e+08 0.00334887 5.75742e+07 2.26217e+07 5.79619e+07 495 5.79042e+07 4.12966e+07 0.0033067 5.79246e+07 50.0088 0.00440222 0.996417 0 50.1678 GTEX-1JKYN-2026-SM-ARL9G 1 B1 2 pieces; focal intimal thickening 7.6 Blood Vessel Artery - Tibial 0007610 209 681 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.994017 448838 0.976067 0.99379 0.844413 20338 1 76 0.00166721 139 0 6.32234e+07 0.023501 307529 6.36185e+07 4.50284e+06 20353 3.14549e+07 0 0.131654 0.99379 0.839169 6.32234e+07 0.00213734 1.36056e+07 4.72414e+06 1.36591e+07 150 1.37919e+07 1.27118e+07 0.00190233 1.34626e+07 49.3958 0.00483396 0.993563 0 50.098 GTEX-1JKYN-2126-SM-ARU8W 1 B1 2 pieces; include pleura (target is 1 cm below pleura), some widening of airspaces, small bone marrow embolism 8.7 Lung Lung 0008952 219 671 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993428 378363 0.976111 0.994542 0.818991 23825 1 76 0.0020822 279 0 9.3981e+07 0.0234534 409503 9.44968e+07 3.27343e+06 23859 4.68376e+07 0 0.15712 0.994542 0.814522 9.3981e+07 0.00268932 2.09595e+07 7.26947e+06 2.10765e+07 270 2.11218e+07 1.79538e+07 0.00238542 2.10089e+07 49.866 0.00433351 0.995657 0 50.1392 GTEX-1JKYN-2226-SM-ARZNE 1 B1 6 pieces; target muscularis with small portion of residual submucosa/mucosa in 1 piece 8.2 Colon Colon - Sigmoid 0001159 220 670 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.991043 436715 0.974475 0.992951 0.81178 22313 1 76 0.00214349 147 0 6.97393e+07 0.0251795 485406 7.02344e+07 2.60677e+06 22335 3.46678e+07 0 0.162695 0.992951 0.806057 6.97393e+07 0.00344614 1.5071e+07 6.23029e+06 1.52613e+07 159 1.53189e+07 1.24461e+07 0.00279356 1.51283e+07 49.6871 0.00691123 0.994859 0 50.3137 GTEX-1JKYN-2326-SM-CGQG7 1 B1 6 pieces; variable representation of mucosa/submucosa/muscularis, small amount of adherent mucus 7.4 Colon Colon - Transverse 0001157 234 656 BP-69231 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2015 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992659 709045 0.975948 0.994504 0.821585 26644 1 76 0.00369129 548 0 2.4254e+08 0.0235052 4.45834e+06 2.4388e+08 1.6529e+07 26714 1.20834e+08 0 0.154363 0.994504 0.81707 2.4254e+08 0.00376802 5.39025e+07 3.46947e+07 5.47276e+07 452 5.45537e+07 3.44007e+07 0.0037275 5.43757e+07 49.9183 0.0182809 0.99635 0 50.3797 GTEX-1JKYR-0004-SM-DE1K8 B1 Blood Whole Blood 0013756 -3 BP-60475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JKYR-0004-SM-DJWYJ B1 Blood Whole Blood 0013756 -3 BP-60475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/13/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JKYR-0005-SM-DHXL5 B1 8.1 Blood Whole Blood 0013756 -3 BP-60520 RNA isolation_PAXgene Blood RNA (Manual) 02/13/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.987632 551542 0.977137 0.988421 0.828236 19279 1 76 0.00232392 206 0 1.08067e+08 0.0221726 548869 1.09333e+08 5.88781e+06 19292 5.38305e+07 0 0.148901 0.988421 0.818647 1.08067e+08 0.00270462 2.48272e+07 1.10039e+08 2.5116e+07 231 2.51059e+07 2.81157e+07 0.00251412 2.49255e+07 49.8198 0.00502018 0.989211 0 50.2891 GTEX-1JKYR-0126-SM-CNPOJ 0 B1 6 pieces; well trimmed; dermal fat 10% 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 409 491 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986854 193436 0.969933 0.989321 0.803723 24077 1 76 0.00543276 155 0 7.49111e+07 0.0298752 913585 7.57197e+07 1.66375e+07 24106 3.72651e+07 0 0.16621 0.989321 0.79514 7.49111e+07 0.00763968 1.63198e+07 9.12631e+06 1.65863e+07 162 1.65918e+07 1.16655e+07 0.00653347 1.64866e+07 49.841 0.0120654 0.991788 0 50.405 GTEX-1JKYR-0226-SM-CNPOK 0 B1 2 pieces; 20% fibrous content; 5% nerve 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 406 494 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412,LCSET-9786 09/04/2016 TruSeq.v1 RNASEQ 0.986273 836432 0.971891 0.988104 0.79012 25269 1 76 0.00333673 383 0 1.27108e+08 0.0277748 695123 1.28639e+08 1.51687e+07 25322 6.30774e+07 0 0.181771 0.988104 0.780721 1.27108e+08 0.00443119 2.80059e+07 1.14314e+07 2.7999e+07 363 2.82735e+07 2.21867e+07 0.00388294 2.79528e+07 49.7148 0.00540368 0.989935 0 49.9939 GTEX-1JKYR-0326-SM-CNPOL 0 B1 2 pieces; fat <5% 8.6 Muscle Muscle - Skeletal 0011907 414 486 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.987231 325448 0.986053 0.989934 0.886335 20479 1 76 0.00541584 274 0 1.04541e+08 0.0137066 2.27373e+06 1.05604e+08 2.66842e+07 20488 5.2016e+07 0 0.0997182 0.989934 0.877413 1.04541e+08 0.00781687 2.26205e+07 1.64656e+07 2.30099e+07 277 2.30367e+07 2.07897e+07 0.00661308 2.2832e+07 49.7769 0.0215307 0.992638 0 50.4267 GTEX-1JKYR-0426-SM-CNPOM 0 B1 2 pieces; 10% ezternal fibrous and fatty content 7.5 Nerve Nerve - Tibial 0001323 414 486 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985021 214095 0.967141 0.98795 0.783326 24051 1 76 0.00564236 166 0 7.64753e+07 0.0325607 551275 7.7408e+07 1.93217e+07 24079 3.802e+07 0 0.183815 0.98795 0.773887 7.64753e+07 0.00814533 1.67545e+07 7.4058e+06 1.68451e+07 158 1.68902e+07 1.2416e+07 0.00689014 1.69218e+07 50.0468 0.00712168 0.990879 0 50.1349 GTEX-1JKYR-0526-SM-ARZMU 1 B1 2 pieces; no plaques; well dissected 7.1 Blood Vessel Artery - Tibial 0007610 416 484 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988851 539184 0.970897 0.991084 0.810166 20601 1 76 0.00227481 144 0 7.02612e+07 0.0287517 606544 7.08933e+07 3.05254e+06 20619 3.48818e+07 0 0.160731 0.991084 0.802942 7.02612e+07 0.00365634 1.49848e+07 5.49564e+06 1.5161e+07 158 1.52784e+07 1.28952e+07 0.00296402 1.50074e+07 49.5525 0.00855573 0.993317 0 50.2922 GTEX-1JKYR-0626-SM-ARL8R 0 B1 6 pieces; well trimmed; <5% dermal fat 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 421 479 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992599 1.01175e+06 0.969683 0.992769 0.790225 23625 1 76 0.00173197 179 0 7.45365e+07 0.0300605 546075 7.50794e+07 3.61517e+06 23648 3.7057e+07 0 0.179458 0.992769 0.78451 7.45365e+07 0.0021822 1.63975e+07 9.93124e+06 1.63561e+07 168 1.668e+07 1.39774e+07 0.00195705 1.60901e+07 49.1 0.0072733 0.992938 0 49.9368 GTEX-1JKYR-0726-SM-AHZ3K 0 B1 2 pieces; well dissected; no extraneous tissue 7.4 Salivary Gland Minor Salivary Gland 0006330 422 478 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987607 341560 0.965255 0.989021 0.74551 24411 1 76 0.00711698 121 0 6.55434e+07 0.0341734 425451 6.6271e+07 1.27369e+07 24443 3.25712e+07 0 0.219745 0.989021 0.737324 6.55434e+07 0.00835839 1.43654e+07 7.34845e+06 1.45198e+07 128 1.44822e+07 9.55821e+06 0.0077368 1.4492e+07 50.017 0.00641987 0.990434 0 50.2673 GTEX-1JKYR-0826-SM-ARU8L 0 B1 2 pieces; well dissected; no extraneous tissue 7.3 Thyroid Thyroid 0002046 431 469 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992314 299146 0.964409 0.993384 0.737046 24067 1 76 0.00216721 158 0 7.87111e+07 0.0352958 311508 7.92353e+07 2.87831e+06 24111 3.92262e+07 0 0.227363 0.993384 0.732169 7.87111e+07 0.00268846 1.72023e+07 6.98268e+06 1.73108e+07 167 1.73378e+07 1.29475e+07 0.00242756 1.72502e+07 49.8734 0.00393143 0.994453 0 50.1572 GTEX-1JKYR-0926-SM-CMKGJ 1 B1 2 pieces; fibrofatty tissue without mammary ducts 7.8 Breast Breast - Mammary Tissue 0008367 434 466 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994643 355101 0.974844 0.995587 0.829713 23810 1 76 0.00186839 382 0 1.13178e+08 0.0247917 1.06971e+06 1.1368e+08 7.52779e+06 23838 5.64334e+07 0 0.145131 0.995587 0.826052 1.13178e+08 0.00282025 2.48906e+07 1.04056e+07 2.50807e+07 348 2.51034e+07 2.17443e+07 0.00234386 2.49736e+07 49.8704 0.00940985 0.996532 0 50.1902 GTEX-1JKYR-1026-SM-CGQGI 1 B1 2 pieces; 30 & 50% adipose content 8 Pancreas Pancreas 0001150 439 461 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.994023 652701 0.978159 0.995624 0.845108 25200 1 76 0.00361592 379 0 2.03777e+08 0.0215428 708159 2.04672e+08 1.41176e+07 25243 1.01565e+08 0 0.133051 0.995624 0.84141 2.03777e+08 0.00355347 4.64541e+07 4.31817e+07 4.66440e+07 360 4.67865e+07 5.60208e+07 0.00358641 4.66012e+07 49.9008 0.00345996 0.997224 0 50.102 GTEX-1JKYR-1126-SM-CGQGJ 1 B1 2 pieces; mildly congested 5.8 Spleen Spleen 0002106 435 465 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991089 613596 0.961781 0.99282 0.806229 26975 1 76 0.00400319 526 0 1.83405e+08 0.0374487 1.40096e+06 1.84732e+08 1.35463e+07 27032 9.13017e+07 0 0.155552 0.99282 0.80044 1.83405e+08 0.00404629 4.01216e+07 2.6808e+07 4.04123e+07 441 4.03496e+07 2.8106e+07 0.00402356 4.045e+07 50.0621 0.00758375 0.99455 0 50.1805 GTEX-1JKYR-1226-SM-CM2S7 0 B1 2 pieces; adipose tissue with minimal fibrous content 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 438 462 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993868 451800 0.975781 0.995286 0.824558 23616 1 76 0.00198249 378 0 1.02288e+08 0.0239496 1.49328e+06 1.02773e+08 6.39106e+06 23639 5.09687e+07 0 0.151223 0.995286 0.82067 1.02288e+08 0.00258813 2.25602e+07 1.0631e+07 2.27976e+07 338 2.2826e+07 1.72163e+07 0.00228488 2.26638e+07 49.8218 0.0145299 0.996703 0 50.2616 GTEX-1JKYR-1326-SM-ARU8M 0 B1 6 pieces; well dissected muscularis 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 448 452 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993541 287949 0.976019 0.994634 0.832942 22291 1 76 0.00186362 221 0 8.53821e+07 0.0236365 1.09113e+06 8.58427e+07 2.76647e+06 22312 4.2558e+07 0 0.143077 0.994634 0.828473 8.53821e+07 0.00257185 1.85848e+07 7.08210e+06 1.87298e+07 249 1.87282e+07 1.60998e+07 0.00221735 1.86725e+07 49.9255 0.0127108 0.995728 0 50.1944 GTEX-1JKYR-1626-SM-AHZ3L 1 B1 2 pieces; active spermatogenesis 6.9 Testis Testis 0000473 446 454 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.987451 519427 0.943248 0.989035 0.723526 33596 1 76 0.00681591 276 0 1.1635e+08 0.0565062 2.29279e+06 1.1764e+08 2.02153e+07 33660 5.78917e+07 0 0.219722 0.989035 0.715593 1.1635e+08 0.00850708 2.49745e+07 1.64424e+07 2.52135e+07 269 2.52077e+07 1.55577e+07 0.00766015 2.51406e+07 49.9334 0.0194899 0.990619 0 50.2382 GTEX-1JKYR-1726-SM-C1YR6 1 B1 2 pieces; no hyperplasia 7.6 Prostate Prostate 0002367 463 437 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.9895 447539 0.960135 0.991778 0.742649 25819 1 76 0.00200761 203 0 9.00243e+07 0.0396125 458531 9.07707e+07 4.3736e+06 25867 4.47784e+07 0 0.217486 0.991778 0.736543 9.00243e+07 0.00249285 1.95959e+07 8.61262e+06 1.97568e+07 213 1.9779e+07 1.35088e+07 0.00224967 1.97663e+07 49.984 0.00505153 0.994055 0 50.2045 GTEX-1JKYR-1926-SM-C1YR7 1 B1 6 pieces; well preserved; abundant mucus in lumen 8 Colon Colon - Transverse 0001157 470 430 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989339 358344 0.972042 0.991951 0.813304 23370 1 76 0.00199316 149 0 6.42154e+07 0.027089 1.02084e+06 6.47365e+07 3.00732e+06 23392 3.19127e+07 0 0.158738 0.991951 0.806758 6.42154e+07 0.00260454 1.42698e+07 6.62773e+06 1.42136e+07 156 1.4241e+07 1.07812e+07 0.00229805 1.43924e+07 50.2643 0.0157692 0.994563 0 49.9014 GTEX-1JKYR-2026-SM-CNPON 1 B1 6 pieces; 2 pieces have mucosa attached, 2 and 2.5mm long [labeled] 7.9 Colon Colon - Sigmoid 0001159 483 417 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984307 254882 0.97442 0.987662 0.830531 22701 1 76 0.00561847 150 0 7.08037e+07 0.0252757 989472 7.16882e+07 1.91663e+07 22717 3.51894e+07 0 0.143889 0.987662 0.820284 7.08037e+07 0.00845256 1.53264e+07 7.63785e+06 1.55037e+07 147 1.5574e+07 1.25684e+07 0.00703071 1.54743e+07 49.8395 0.0138024 0.991017 0 50.2876 GTEX-1JKYR-2126-SM-CNNPC 0 B1 6 pieces; moderate chronic esophagitis (focal lymphoid deposits in lamina propria) 9.8 Esophagus Esophagus - Mucosa 0006920 480 420 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989675 426388 0.976699 0.991685 0.840344 24586 1 76 0.00216374 387 0 1.40227e+08 0.022933 713652 1.41402e+08 1.49604e+07 24616 6.98368e+07 0 0.136355 0.991685 0.833357 1.40227e+08 0.00321091 3.14947e+07 2.19801e+07 3.1698e+07 332 3.18074e+07 3.01818e+07 0.00268626 3.16524e+07 49.8779 0.00504696 0.993696 0 50.1609 GTEX-1JMI6-0002-SM-DE1KA B1 Blood Whole Blood 0013756 1268 BP-60559 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/17/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMLX-0006-SM-DHXJ6 B1 8.4 Blood Whole Blood 0013756 1109 BP-60699 RNA isolation_PAXgene Blood RNA (Manual) 02/20/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.963614 224842 0.991665 0.964495 0.826682 17645 1 76 0.00199358 256 0 1.27795e+08 0.00704284 106789 1.325e+08 6.6886e+06 17650 6.35946e+07 0 0.164983 0.964495 0.797331 1.27795e+08 0.00244867 3.11537e+07 2.23008e+08 3.1111e+07 263 3.11727e+07 3.97262e+07 0.00222092 3.12061e+07 50.0268 0.000805957 0.965377 0 49.9657 GTEX-1JMLX-0011-R6b-SM-EXUT9 B1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1113 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991742 638094 0.964147 0.992987 0.844063 21937 1 76 0.00186171 126 0 4.91943e+07 0.0353815 1.79258e+06 4.95417e+07 1.67607e+06 21951 2.44663e+07 0 0.120083 0.992987 0.838144 4.91943e+07 0.00253858 1.07988e+07 4.09469e+06 1.08744e+07 147 1.09108e+07 6.97571e+06 0.00219972 1.08139e+07 49.777 0.0361832 0.994233 0 50.1743 GTEX-1JMLX-0011-R9a-SM-EYYXM B1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1113 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984549 194250 0.959656 0.987942 0.821453 22563 1 76 0.00235301 235 0 7.37169e+07 0.0399898 2.6751e+06 7.46166e+07 2.79242e+06 22585 3.66366e+07 0 0.138203 0.987942 0.811548 7.37169e+07 0.00384896 1.62109e+07 7.01098e+06 1.65748e+07 219 1.64419e+07 9.24693e+06 0.00309841 1.65696e+07 50.1934 0.0358513 0.991336 0 50.5549 GTEX-1JMLX-0126-SM-CMKG9 1 B1 2 pieces; 5% fibrous content; central holes in 1 piece 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1276 827 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994121 337977 0.971306 0.995103 0.771327 24571 1 76 0.00234392 284 0 1.02301e+08 0.0283488 632016 1.02804e+08 7.72995e+06 24618 5.09852e+07 0 0.199979 0.995103 0.767549 1.02301e+08 0.00307874 2.2382e+07 1.00476e+07 2.25867e+07 286 2.25912e+07 1.68743e+07 0.00271097 2.24704e+07 49.8659 0.00614776 0.996084 0 50.2277 GTEX-1JMLX-0226-SM-CM2RO 1 B1 6 pieces; <2% dermal fat; well trimmed 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1276 827 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992093 454675 0.965992 0.993397 0.801376 23286 1 76 0.00219878 258 0 9.17408e+07 0.0337178 733926 9.23506e+07 5.76476e+06 23312 4.56827e+07 0 0.164617 0.993397 0.796084 9.17408e+07 0.00303924 1.97876e+07 1.48535e+07 1.99344e+07 249 1.99398e+07 1.48437e+07 0.00261846 1.99009e+07 49.9511 0.00794717 0.994701 0 50.1847 GTEX-1JMLX-0326-SM-CM2RP 1 B1 2 pieces; <2% fat 8.3 Muscle Muscle - Skeletal 0011907 1277 826 BP-69588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/30/2015 LCSET-9115,LCSET-9513 07/27/2016 TruSeq.v1 RNASEQ 0.951922 1.69346e+06 0.98185 0.963974 0.853828 22729 1 76 0.00319613 375 0 1.30314e+08 0.0178788 1.40448e+06 1.35184e+08 1.23333e+07 22750 6.35068e+07 0 0.128022 0.963974 0.823068 1.30314e+08 0.00525222 2.76905e+07 1.63709e+07 2.76492e+07 349 2.85995e+07 2.80278e+07 0.00421132 2.81771e+07 49.628 0.0103894 0.976026 0 49.9626 GTEX-1JMLX-0426-SM-COH2Z 1 B1 3 pieces; 10% external fat 6.8 Nerve Nerve - Tibial 0001323 1278 825 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991092 245671 0.961339 0.992533 0.733327 24118 1 76 0.00364529 151 0 6.94687e+07 0.0384255 268464 6.99913e+07 6.91416e+06 24157 3.45984e+07 0 0.228012 0.992533 0.727851 6.94687e+07 0.00469441 1.51711e+07 6.45418e+06 1.52421e+07 152 1.52333e+07 9.86293e+06 0.00416909 1.52781e+07 50.0735 0.00383568 0.993975 0 50.1168 GTEX-1JMLX-0526-SM-ARL8S 1 B1 2 pieces; thin flat intimal plaques with focal calcifications 7.6 Blood Vessel Artery - Tibial 0007610 1279 824 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992189 1.02978e+06 0.971631 0.992392 0.813619 21430 1 76 0.00186455 133 0 6.1476e+07 0.0279634 147258 6.19473e+07 3.74047e+06 21446 3.05414e+07 0 0.158011 0.992392 0.807429 6.1476e+07 0.0025009 1.32872e+07 5.91849e+06 1.32489e+07 142 1.35589e+07 1.19541e+07 0.00218266 1.29972e+07 48.9424 0.00237715 0.992595 0 49.9279 GTEX-1JMLX-0626-SM-ARL8T 1 B1 6 pieces; well trimmed; <1% dermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1281 822 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.989617 361534 0.970662 0.989678 0.765901 22301 1 76 0.00213861 137 0 5.6678e+07 0.0290837 514062 5.72691e+07 4.04175e+06 22331 2.81802e+07 0 0.204762 0.989678 0.757995 5.6678e+07 0.00271163 1.24691e+07 7.16738e+06 1.25702e+07 132 1.27228e+07 8.76639e+06 0.0024251 1.23217e+07 49.1993 0.00897626 0.98974 0 50.2019 GTEX-1JMLX-0726-SM-AHZ3M 1 B1 2 pieces; active spermatogenesis 5.9 Testis Testis 0000473 1299 804 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98698 487696 0.910243 0.988395 0.68888 34419 1 76 0.00705398 163 0 9.96794e+07 0.0894168 1.00243e+06 1.0085e+08 1.78517e+07 34500 4.95931e+07 0 0.221363 0.988395 0.680886 9.96794e+07 0.00860436 2.00174e+07 1.68339e+07 2.0179e+07 162 2.02072e+07 1.47204e+07 0.00782806 2.01108e+07 49.8805 0.00993984 0.98981 0 50.201 GTEX-1JMLX-0826-SM-CNNPP 1 B1 2 pieces; no extraneous tissue 5.9 Thyroid Thyroid 0002046 1309 794 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991502 229814 0.965014 0.99332 0.732005 25068 1 76 0.00268354 206 0 9.32165e+07 0.0346793 412287 9.38433e+07 1.0365e+07 25120 4.64187e+07 0 0.233009 0.99332 0.727116 9.32165e+07 0.00348263 2.03257e+07 9.52052e+06 2.05063e+07 247 2.05473e+07 1.35107e+07 0.00308235 2.04413e+07 49.8707 0.00439335 0.995139 0 50.2212 GTEX-1JMLX-0826-SM-DKTR9 1 B1 2 pieces; no extraneous tissue Thyroid Thyroid 0002046 1309 794 BP-73232 DNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMLX-0826-SM-DLT2I 1 B1 2 pieces; no extraneous tissue Thyroid Thyroid 0002046 1309 794 BP-73232 DNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMLX-0926-SM-CNNPQ 1 B1 2 pieces; numerous pigmented alveolar macrophages 8.3 Lung Lung 0008952 1312 791 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991424 274491 0.974044 0.993351 0.774276 23540 1 76 0.00275727 166 0 7.88733e+07 0.0254788 187676 7.94012e+07 8.50658e+06 23578 3.9263e+07 0 0.199768 0.993351 0.769127 7.88733e+07 0.00375575 1.75115e+07 6.67994e+06 1.7598e+07 177 1.76499e+07 1.40894e+07 0.00325554 1.76034e+07 49.934 0.00236364 0.995278 0 50.1233 GTEX-1JMLX-1026-SM-D3L8U 0 B1 2 pieces; 5% fibrous content 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1321 782 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990943 284230 0.976588 0.993156 0.809293 23247 1 76 0.00275419 201 0 8.6267e+07 0.0231158 787608 8.68615e+07 9.00831e+06 23273 4.2938e+07 0 0.167294 0.993156 0.803755 8.6267e+07 0.00390341 1.88544e+07 9.74397e+06 1.9123e+07 208 1.91409e+07 1.48378e+07 0.00332752 1.90197e+07 49.8411 0.0090674 0.995369 0 50.3537 GTEX-1JMLX-1126-SM-CXZJN 2 B1 2 pieces; well dissected 7.1 Adrenal Gland Adrenal Gland 0002369 1325 778 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.99303 371855 0.970393 0.994676 0.772002 23438 1 76 0.00224245 371 0 1.02843e+08 0.0293129 2.27246e+06 1.03394e+08 6.78826e+06 23475 5.12381e+07 0 0.198391 0.994676 0.767892 1.02843e+08 0.00334071 2.20735e+07 1.20555e+07 2.25704e+07 332 2.25764e+07 1.38462e+07 0.00279067 2.22271e+07 49.6103 0.0219787 0.996323 0 50.5564 GTEX-1JMLX-1226-SM-CY8HW 2 B1 2 pieces; glands poorly preserved, stroma intact 5.9 Prostate Prostate 0002367 1327 776 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988967 486060 0.951412 0.991023 0.741858 24612 1 76 0.00501486 146 0 8.02106e+07 0.0483752 1.68805e+06 8.09371e+07 9.57468e+06 24650 3.98956e+07 0 0.209554 0.991023 0.735199 8.02106e+07 0.00787129 1.72148e+07 1.90249e+07 1.75234e+07 172 1.75055e+07 9.41344e+06 0.00644011 1.73984e+07 49.8465 0.0208563 0.993079 0 50.4441 GTEX-1JMLX-1326-SM-CXZJO 1 B1 2 pieces; minimal congestion; no inflammation 7 Liver Liver 0001114 1330 773 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993795 212230 0.976725 0.995044 0.816171 22384 1 76 0.00241032 201 0 8.2522e+07 0.0231416 2.21754e+06 8.29329e+07 5.7772e+06 22408 4.11215e+07 0 0.160554 0.995044 0.812126 8.2522e+07 0.00297495 1.79675e+07 9.57947e+06 1.85587e+07 221 1.8483e+07 1.19113e+07 0.00269228 1.81345e+07 49.5241 0.026739 0.996294 0 50.8092 GTEX-1JMLX-1426-SM-CNNPO 2 B1 2 pieces; mild congestion 6.4 Spleen Spleen 0002106 1329 774 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99024 340245 0.959061 0.992342 0.680896 26261 1 76 0.00289311 276 0 1.10534e+08 0.0404384 310292 1.11387e+08 1.08994e+07 26327 5.4998e+07 0 0.278166 0.992342 0.675681 1.10534e+08 0.00432055 2.40598e+07 1.50542e+07 2.42125e+07 263 2.42858e+07 1.60912e+07 0.00360532 2.42104e+07 49.9223 0.00278571 0.994443 0 50.1582 GTEX-1JMLX-1526-SM-AHZ3N 1 B1 6 pieces; scattered mild focal interstitial fibrosis; no sign of acute or chronic disease; 6.1 Kidney Kidney - Cortex 0001225 1331 772 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.990495 208120 0.976377 0.992146 0.81495 22148 1 76 0.00586361 122 0 6.05777e+07 0.023439 2.85615e+06 6.10572e+07 7.90922e+06 22162 3.01563e+07 0 0.161427 0.992146 0.808549 6.05777e+07 0.00753082 1.33956e+07 1.31978e+07 1.36395e+07 147 1.36188e+07 5.40609e+06 0.00669583 1.34916e+07 49.7654 0.0467783 0.993798 0 50.4512 GTEX-1JMLX-1626-SM-ARZMV 1 B1 2 pieces; several small foci of myofiber damage or drop-out (circled) 7.2 Heart Heart - Left Ventricle 0006566 1333 770 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988307 594792 0.977722 0.990561 0.814684 20879 1 76 0.00272183 155 0 7.07543e+07 0.0221158 3.85865e+06 7.14285e+07 2.96027e+06 20892 3.51147e+07 0 0.163037 0.990561 0.806994 7.07543e+07 0.00381389 1.53706e+07 1.96394e+07 1.5867e+07 179 1.60615e+07 9.76339e+06 0.00326662 1.53024e+07 48.7897 0.0540211 0.992814 0 50.7946 GTEX-1JMLX-1826-SM-CNPOX 1 B1 2 pieces; 30% & 10% fibrous content 6.3 Heart Heart - Atrial Appendage 0006631 1334 769 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986503 272654 0.976793 0.989448 0.816075 22979 1 76 0.00565473 267 0 1.03434e+08 0.0230108 3.11341e+06 1.04537e+08 2.42592e+07 23011 5.14504e+07 0 0.160718 0.989448 0.807464 1.03434e+08 0.00891297 2.1503e+07 1.57531e+07 2.17892e+07 304 2.18496e+07 1.33641e+07 0.007279 2.16844e+07 49.8102 0.0297828 0.992393 0 50.3306 GTEX-1JMLX-2026-SM-CMKGN 1 B1 2 pieces, 1 with abundant fibrous tissue and ducts, consistent with gynecomastoid change 5.8 Breast Breast - Mammary Tissue 0008367 1348 755 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993415 619729 0.955086 0.994254 0.743014 24317 1 76 0.00239718 170 0 8.50363e+07 0.0445872 430800 8.55277e+07 6.55239e+06 24352 4.23713e+07 0 0.212071 0.994254 0.738745 8.50363e+07 0.00288924 1.82997e+07 2.52984e+07 1.85511e+07 189 1.8534e+07 1.35533e+07 0.002643 1.84047e+07 49.8251 0.00503696 0.995094 0 50.3411 GTEX-1JMLX-2126-SM-CL54B 1 B1 6 pieces; well dissected muscularis 7.5 Esophagus Esophagus - Muscularis 0004648 1340 763 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990878 458805 0.968434 0.992622 0.756872 24167 1 76 0.00295437 208 0 1.04545e+08 0.031347 1.08032e+06 1.05322e+08 1.47941e+07 24215 5.20141e+07 0 0.211563 0.992622 0.751287 1.04545e+08 0.00422883 2.24137e+07 9.20167e+06 2.26676e+07 251 2.26815e+07 1.53294e+07 0.00359048 2.25742e+07 49.8815 0.0102573 0.994366 0 50.2816 GTEX-1JMLX-2226-SM-CNPOY 1 B1 6 pieces; well dissected muscularis 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1342 761 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983571 214634 0.968909 0.986497 0.74156 22652 1 76 0.00615278 113 0 6.18578e+07 0.0308429 533994 6.27045e+07 1.67973e+07 22680 3.07319e+07 0 0.227349 0.986497 0.731546 6.18578e+07 0.00832248 1.32946e+07 6.63161e+06 1.33979e+07 118 1.34296e+07 9.03232e+06 0.00723441 1.34358e+07 50.0117 0.00851604 0.989423 0 50.1936 GTEX-1JMLX-2326-SM-CXZJP 1 B1 6 pieces; mucosa well preserved; severe submucosal ductal dilatation with focal lymphoid aggregates 7.7 Esophagus Esophagus - Mucosa 0006920 1343 760 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.99274 273605 0.972541 0.994214 0.738095 24021 1 76 0.00234448 156 0 7.88625e+07 0.0270331 390888 7.93214e+07 5.29074e+06 24053 3.92758e+07 0 0.234446 0.994214 0.733824 7.88625e+07 0.00334685 1.76012e+07 8.66887e+06 1.78286e+07 173 1.78387e+07 1.22882e+07 0.00284492 1.77086e+07 49.8171 0.0049279 0.995688 0 50.3209 GTEX-1JMLX-2426-SM-CXZJQ 1 B1 6 pieces; mucosa moderately autolyzed focally 7.3 Stomach Stomach 0000945 1345 758 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.983967 226887 0.985785 0.985457 0.840676 22431 1 76 0.00216546 391 0 1.02093e+08 0.0137328 677534 1.036e+08 6.46172e+06 22457 5.08333e+07 0 0.145109 0.985457 0.82845 1.02093e+08 0.00305781 2.3614e+07 1.21757e+08 2.41754e+07 308 2.42412e+07 2.839e+07 0.00261096 2.37008e+07 49.4364 0.00653992 0.986948 0 50.5874 GTEX-1JMLX-2526-SM-CY8HX 1 B1 6 pieces; well dissected muscularis 6.1 Colon Colon - Sigmoid 0001159 1349 754 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989067 285995 0.968196 0.991263 0.774105 23649 1 76 0.00480624 153 0 7.9339e+07 0.031577 878228 8.00383e+07 9.43691e+06 23679 3.94559e+07 0 0.194091 0.991263 0.767342 7.9339e+07 0.00801859 1.70772e+07 7.14852e+06 1.72467e+07 168 1.72339e+07 1.17665e+07 0.00640886 1.72577e+07 50.0346 0.0109726 0.993458 0 50.2468 GTEX-1JMLX-2726-SM-CM2SB 2 B1 6 pieces; mucosa severely autolyzed; muscle intact 6.8 Colon Colon - Transverse 0001157 1352 751 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.992555 342895 0.965867 0.993812 0.772585 23999 1 76 0.00228834 191 0 8.19767e+07 0.0338941 1.05678e+06 8.24871e+07 5.16474e+06 24035 4.08115e+07 0 0.193282 0.993812 0.767804 8.19767e+07 0.0030634 1.77244e+07 7.29566e+06 1.78547e+07 205 1.7851e+07 1.16856e+07 0.00267538 1.78313e+07 49.9725 0.0128115 0.99507 0 50.1831 GTEX-1JMLX-2826-SM-C1YRH 1 B1 1 piece; mostly anterior lobe; small posterior lobe outlined 7.9 Pituitary Pituitary 0000007 1381 722 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990353 674561 0.959742 0.992744 0.727364 25854 1 76 0.00206915 165 0 8.66017e+07 0.0399913 328294 8.72347e+07 4.22679e+06 25902 4.30755e+07 0 0.232377 0.992744 0.722087 8.66017e+07 0.00245792 1.86071e+07 1.01282e+07 1.87108e+07 188 1.87931e+07 1.28878e+07 0.00226307 1.8715e+07 49.8959 0.00376334 0.995135 0 50.1389 GTEX-1JMLX-2926-SM-CL54C 1 B1 4 pieces; well sampled cortex 6.3 Brain Brain - Cortex 0001870 1387 716 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992459 769713 0.963078 0.9943 0.823447 25233 1 76 0.00289433 372 0 1.2279e+08 0.0365803 5.60034e+06 1.23494e+08 1.6762e+07 25262 6.11278e+07 0 0.139631 0.9943 0.818753 1.2279e+08 0.00408395 2.65306e+07 2.49391e+07 2.74284e+07 395 2.74533e+07 1.41004e+07 0.00348804 2.67024e+07 49.3068 0.045349 0.996141 0 50.8319 GTEX-1JMLX-3026-SM-EV79Q 1 B1 4 pieces 7.1 Brain Brain - Cerebellum 0002037 1389 714 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991174 819924 0.931919 0.992168 0.699462 25333 1 76 0.00269874 270 0 1.13456e+08 0.0677585 1.98822e+06 1.14352e+08 1.17492e+07 25382 5.65274e+07 0 0.232457 0.992168 0.693983 1.13456e+08 0.00372538 2.40618e+07 3.83666e+07 2.44494e+07 290 2.44251e+07 1.31624e+07 0.00321155 2.41903e+07 49.7585 0.0173869 0.993161 0 50.3995 GTEX-1JMOU-0004-SM-DE1KO B1 Blood Whole Blood 0013756 1301 BP-60698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/20/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMOU-0004-SM-DJWY8 B1 Blood Whole Blood 0013756 1301 BP-60698 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/20/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMOU-0006-SM-DHXJ7 B1 8.1 Blood Whole Blood 0013756 1301 BP-60699 RNA isolation_PAXgene Blood RNA (Manual) 02/20/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991752 550064 0.970811 0.992835 0.771774 20398 1 76 0.00265787 138 0 8.49236e+07 0.0286223 325165 8.55365e+07 4.75916e+06 20426 4.22908e+07 0 0.199037 0.992835 0.766244 8.49236e+07 0.00317781 1.90207e+07 5.35704e+07 1.92437e+07 160 1.92792e+07 1.76445e+07 0.00291756 1.90811e+07 49.7417 0.00380148 0.993918 0 50.2914 GTEX-1JMOU-0011-R11b-SM-EXUTA B1, A1 7.3 Brain Brain - Cerebellar Hemisphere 0002037 1300 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99138 396727 0.957071 0.992412 0.799911 21986 1 76 0.001716 145 0 5.9358e+07 0.0425807 2.05221e+06 5.98118e+07 1.85966e+06 22006 2.95514e+07 0 0.157159 0.992412 0.793841 5.9358e+07 0.00228569 1.29297e+07 6.85082e+06 1.3094e+07 170 1.30865e+07 6.70721e+06 0.00200055 1.29883e+07 49.8117 0.0343111 0.993444 0 50.3158 GTEX-1JMOU-0011-R3a-SM-EYYXN B1, A1 6.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1300 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982752 207506 0.970542 0.987702 0.870613 22726 1 76 0.00207203 267 0 7.41536e+07 0.0291222 4.86928e+06 7.50769e+07 2.88653e+06 22742 3.68006e+07 0 0.0999288 0.987702 0.859906 7.41536e+07 0.0038546 1.63017e+07 8.65845e+06 1.65013e+07 292 1.65463e+07 8.19072e+06 0.00295885 1.65717e+07 50.0383 0.0648572 0.992652 0 50.3042 GTEX-1JMOU-0126-SM-E9U53 1 B1 6 pieces, adherent fat/serosa up to ~1mm 5.5 Blood Vessel Artery - Aorta 0001496 1317 873 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.974369 236463 0.969303 0.97534 0.744986 22974 1 76 0.00214727 135 0 6.88482e+07 0.030367 196199 7.05889e+07 3.04063e+06 23003 3.42584e+07 0 0.224317 0.97534 0.726615 6.88482e+07 0.0031596 1.49505e+07 6.51432e+06 1.50401e+07 153 1.49963e+07 1.10442e+07 0.00265293 1.5062e+07 50.1093 0.00277946 0.97631 0 50.1494 GTEX-1JMOU-0226-SM-CNNPD 1 B1 2 pieces evidence of acute infarction, rep focus encircled 5.8 Heart Heart - Left Ventricle 0006566 1321 869 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992142 143038 0.987721 0.994642 0.873139 19758 1 76 0.002101 365 0 1.0085e+08 0.0122299 6.81965e+06 1.01393e+08 1.06137e+07 19765 5.02337e+07 0 0.114582 0.994642 0.86846 1.0085e+08 0.00359767 2.18818e+07 2.97979e+07 2.28657e+07 383 2.27808e+07 5.18495e+06 0.00284746 2.21501e+07 49.2982 0.0672594 0.997141 0 51.0994 GTEX-1JMOU-0326-SM-ARL8X 1 B1 2 pieces, no abnormalities 6.2 Heart Heart - Atrial Appendage 0006631 1324 866 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8137,LCSET-8790 03/22/2016 TruSeq.v1 RNASEQ 0.983359 965757 0.976926 0.985939 0.740737 24651 1 76 0.00386145 371 0 1.43321e+08 0.0229339 5.97263e+06 1.45365e+08 2.5934e+07 24702 7.11468e+07 0 0.236189 0.985939 0.730321 1.43321e+08 0.00527352 3.10201e+07 8.23427e+07 3.05073e+07 348 3.12064e+07 1.33088e+07 0.00456564 3.07039e+07 49.5942 0.0410871 0.988518 0 49.5833 GTEX-1JMOU-0526-SM-CNNPE 1 B1 2 pieces, mild edema/congestion 6.5 Lung Lung 0008952 1334 856 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991028 195603 0.973884 0.993301 0.773339 23930 1 76 0.00240685 167 0 7.88628e+07 0.0257902 205922 7.93947e+07 8.67439e+06 23958 3.92475e+07 0 0.200545 0.993301 0.768158 7.88628e+07 0.00354088 1.72956e+07 8.05929e+06 1.74158e+07 173 1.74511e+07 1.42448e+07 0.00297256 1.74298e+07 49.9695 0.00259365 0.995573 0 50.173 GTEX-1JMOU-1026-SM-CYPSS 0 B1 6 pieces, squamous epithelium is ~30-35 microns; focal adherent dermal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1350 840 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994568 305333 0.973128 0.995421 0.780878 24181 1 76 0.00217916 222 0 8.89062e+07 0.0266541 389954 8.93152e+07 6.47626e+06 24216 4.43315e+07 0 0.192251 0.995421 0.777302 8.89062e+07 0.00277612 1.95923e+07 9.86688e+06 1.97977e+07 224 1.97642e+07 1.49599e+07 0.00247738 1.97006e+07 49.9194 0.00436604 0.996273 0 50.2606 GTEX-1JMOU-1126-SM-CYPST 0 B1 2 pieces, rim of adherent fat up to ~2mm, rep delineated 6.5 Nerve Nerve - Tibial 0001323 1353 837 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993845 233230 0.967239 0.994618 0.720107 23598 1 76 0.00229907 142 0 6.74225e+07 0.0324922 245889 6.77873e+07 4.9764e+06 23643 3.36056e+07 0 0.247132 0.994618 0.716231 6.74225e+07 0.00277302 1.48503e+07 6.6857e+06 1.49528e+07 147 1.49306e+07 1.01787e+07 0.00253586 1.49245e+07 49.9898 0.00362736 0.995391 0 50.1719 GTEX-1JMOU-1326-SM-CNPOO 0 B1 2 pieces, minimal adherent fat/atherosis 8.3 Blood Vessel Artery - Tibial 0007610 1365 825 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986697 273938 0.971634 0.989139 0.795346 23431 1 76 0.00560946 216 0 9.67234e+07 0.0280093 435332 9.77855e+07 2.40173e+07 23464 4.81001e+07 0 0.176287 0.989139 0.786708 9.67234e+07 0.00759246 2.08896e+07 9.93547e+06 2.1049e+07 210 2.11078e+07 1.80622e+07 0.00659852 2.10531e+07 49.9351 0.00445191 0.991581 0 50.19 GTEX-1JMOU-1526-SM-CL54I 0 B1 6 pieces, squamous epithelium is ~35 microns; no dermal fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1370 820 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991912 427005 0.975094 0.993393 0.776464 24246 1 76 0.00272325 220 0 9.36632e+07 0.0245006 454584 9.42862e+07 1.29731e+07 24285 4.66203e+07 0 0.19863 0.993393 0.771334 9.36632e+07 0.00364249 2.06923e+07 9.17728e+06 2.07496e+07 217 2.08087e+07 1.62696e+07 0.00318219 2.07684e+07 49.9515 0.00482132 0.994874 0 50.0692 GTEX-1JMOU-2026-SM-CMKGU 1 B1 2 pieces, mainly adipose/fibrous elements; trace ductal elements, delineated 5.7 Breast Breast - Mammary Tissue 0008367 1393 797 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994291 236721 0.976356 0.994988 0.798408 23331 1 76 0.00208257 276 0 9.96093e+07 0.0233531 729539 1.00111e+08 7.32154e+06 23368 4.96596e+07 0 0.177948 0.994988 0.794406 9.96093e+07 0.0024985 2.1778e+07 1.17842e+07 2.20974e+07 329 2.20646e+07 1.60366e+07 0.00229039 2.1882e+07 49.7923 0.00728729 0.995685 0 50.364 GTEX-1JMOU-2626-SM-AHZ49 2 B1 1 piece, adenohypophysis 7.6 Pituitary Pituitary 0000007 1417 773 BP-67833 RNA Extraction from Paxgene-derived Lysate Plate Based 10/06/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.98766 312169 0.957408 0.989262 0.734357 25291 1 76 0.00676786 123 0 7.45608e+07 0.0423734 234015 7.53701e+07 1.34143e+07 25327 3.70636e+07 0 0.223051 0.989262 0.726471 7.45608e+07 0.00903848 1.56442e+07 1.04145e+07 1.58006e+07 141 1.57998e+07 1.07948e+07 0.00790133 1.57605e+07 49.9378 0.00310488 0.990863 0 50.2486 GTEX-1JMOU-2726-SM-CY8IO 1 B1 4 pieces, no abnormalities 6.6 Brain Brain - Cortex 0001870 1420 770 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990934 276504 0.968583 0.992937 0.835289 22851 1 76 0.00451108 129 0 5.85196e+07 0.031115 2.62487e+06 5.89359e+07 6.68553e+06 22866 2.91229e+07 0 0.133295 0.992937 0.829389 5.85196e+07 0.0070665 1.29033e+07 7.68457e+06 1.30963e+07 153 1.30985e+07 6.69539e+06 0.00578622 1.30006e+07 49.8125 0.0445377 0.99494 0 50.3712 GTEX-1JMOU-2826-SM-EV79R 1 B1 4 pieces, no abnormalities 7 Brain Brain - Cerebellum 0002037 1422 768 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990705 800819 0.93145 0.991684 0.710884 25599 1 76 0.00250195 269 0 1.10204e+08 0.0682376 2.3095e+06 1.11128e+08 1.21328e+07 25642 5.4904e+07 0 0.220565 0.991684 0.704972 1.10204e+08 0.00349876 2.32945e+07 3.84902e+07 2.37477e+07 301 2.37033e+07 1.15117e+07 0.00299986 2.34416e+07 49.7225 0.0207823 0.992663 0 50.4817 GTEX-1JMPY-0003-SM-DE1KK B1 Blood Whole Blood 0013756 -204 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMPY-0003-SM-DJWYO B1 Blood Whole Blood 0013756 -204 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMPY-0006-SM-DHXJ8 B1 8.4 Blood Whole Blood 0013756 -204 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992721 704545 0.959848 0.993452 0.794542 20398 1 76 0.00252841 198 0 9.2028e+07 0.0396531 273528 9.26346e+07 4.92728e+06 20416 4.58616e+07 0 0.165306 0.993452 0.789339 9.2028e+07 0.0027477 2.0222e+07 4.45692e+07 2.04352e+07 204 2.04469e+07 1.92827e+07 0.00263797 2.02833e+07 49.7992 0.00295276 0.994182 0 50.2622 GTEX-1JMPY-0126-SM-CJI39 1 B1 2 pieces; includes attachment of fat/vessels (5 and 15%); some interstitial fibrosis and few collections of lymphocytes 7.1 Thyroid Thyroid 0002046 162 914 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992993 819309 0.968067 0.994247 0.758455 24902 1 76 0.00201886 275 0 1.01391e+08 0.0316282 428508 1.01978e+08 5.7977e+06 24947 5.05098e+07 0 0.209612 0.994247 0.754092 1.01391e+08 0.00284106 2.21973e+07 9.27036e+06 2.23803e+07 269 2.24339e+07 1.60638e+07 0.00242944 2.22571e+07 49.8022 0.00420198 0.995502 0 50.2052 GTEX-1JMPY-0226-SM-CKZOK 1 B1 6 pieces; well trimmed hair-bearing skin 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 159 917 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991585 308135 0.968479 0.993458 0.798634 22135 1 76 0.00208369 185 0 6.89293e+07 0.0313495 1.00915e+06 6.93832e+07 6.5224e+06 22160 3.43325e+07 0 0.169845 0.993458 0.79341 6.89293e+07 0.00328149 1.50669e+07 1.06374e+07 1.5237e+07 175 1.52467e+07 9.91884e+06 0.00268146 1.51793e+07 49.8893 0.0145446 0.995332 0 50.2806 GTEX-1JMPY-0326-SM-CM2S2 0 B1 2 pieces; lobulated mature fat, includes few larger vessels 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 915 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993349 331174 0.967663 0.994777 0.827153 22907 1 76 0.00193793 272 0 8.36466e+07 0.0320775 977054 8.40858e+07 5.30208e+06 22932 4.16681e+07 0 0.14051 0.994777 0.822833 8.36466e+07 0.00274441 1.82015e+07 1.29625e+07 1.83712e+07 256 1.83669e+07 1.29152e+07 0.00234059 1.8321e+07 49.9374 0.0116197 0.996207 0 50.232 GTEX-1JMPY-0426-SM-C1YQ3 1 B1 6 pieces; full thickness sections 7.1 Colon Colon - Transverse 0001157 170 906 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.98608 924738 0.973248 0.989399 0.798555 23980 1 76 0.00214686 272 0 9.01612e+07 0.0260566 1.14481e+06 9.11273e+07 4.0321e+06 24011 4.47527e+07 0 0.174693 0.989399 0.790089 9.01612e+07 0.00284275 1.98837e+07 1.15654e+07 2.0173e+07 265 2.02172e+07 1.21329e+07 0.00249364 2.00995e+07 49.854 0.0125628 0.992717 0 50.3612 GTEX-1JMPY-0526-SM-CL54O 1 B1 2 pieces; minimal fat, predominantly dense fibrocollagenous stroma with numerous embedded ducts; detached floater 8.2 Breast Breast - Mammary Tissue 0008367 163 913 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992033 509746 0.966972 0.993631 0.749227 25671 1 76 0.00270165 282 0 1.10984e+08 0.0327379 465625 1.11695e+08 1.49235e+07 25728 5.52552e+07 0 0.217745 0.993631 0.744456 1.10984e+08 0.0036681 2.43296e+07 9.67782e+06 2.45266e+07 296 2.45731e+07 1.72457e+07 0.0031841 2.4451e+07 49.8755 0.00416871 0.995229 0 50.2017 GTEX-1JMPY-0726-SM-CE6RU 1 B1 6 pieces; target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 172 904 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990797 416814 0.977419 0.991995 0.826246 23560 1 76 0.00773553 214 0 9.56189e+07 0.0223142 587676 9.63905e+07 1.48774e+07 23588 4.76114e+07 0 0.151173 0.991995 0.819633 9.56189e+07 0.00721812 2.0879e+07 9.74749e+06 2.10942e+07 209 2.11412e+07 1.69376e+07 0.00747714 2.09388e+07 49.7595 0.00609683 0.993193 0 50.2563 GTEX-1JMPY-0826-SM-AHZ4A 1 B1 6 pieces; includes few lymphoid aggregates and clusters of submucosal glands 9.6 Esophagus Esophagus - Mucosa 0006920 174 902 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.990357 347330 0.975373 0.991886 0.820147 22900 1 76 0.00502638 147 0 7.82233e+07 0.0239842 482365 7.88632e+07 9.526e+06 22916 3.89337e+07 0 0.155226 0.991886 0.813492 7.82233e+07 0.00666438 1.74909e+07 1.03844e+07 1.76213e+07 160 1.76237e+07 1.52127e+07 0.00584412 1.7599e+07 49.9648 0.00611647 0.993414 0 50.1857 GTEX-1JMPY-0926-SM-ARL92 1 B1 6 pieces; full thickness sections, mild chronic gastritis 7.1 Stomach Stomach 0000945 189 887 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992125 506215 0.973244 0.992541 0.821049 22053 1 76 0.00173155 160 0 5.35296e+07 0.026541 566807 5.39319e+07 3.57194e+06 22068 2.66159e+07 0 0.152195 0.992541 0.814925 5.35296e+07 0.00234054 1.17906e+07 1.09532e+07 1.1856e+07 145 1.19822e+07 9.29614e+06 0.00203592 1.16858e+07 49.3739 0.0105097 0.992957 0 50.1382 GTEX-1JMPY-1026-SM-ARZN1 1 B1 6 pieces; predominantly target muscularis, but residual submucosa and strip of mucosa 7.8 Colon Colon - Sigmoid 0001159 194 882 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.985967 953682 0.971661 0.988134 0.800874 22271 1 76 0.00248555 136 0 5.94478e+07 0.0280277 404961 6.01617e+07 3.22094e+06 22287 2.94175e+07 0 0.170787 0.988134 0.791371 5.94478e+07 0.00382799 1.27773e+07 6.76976e+06 1.297e+07 136 1.33961e+07 9.98055e+06 0.0031553 1.2462e+07 48.1938 0.00673121 0.9903 0 50.3742 GTEX-1JMPY-1226-SM-CJI3A 0 B1 2 pieces 8.3 Muscle Muscle - Skeletal 0011907 378 698 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.993697 1.13074e+06 0.985705 0.994691 0.882301 19786 1 76 0.00177636 384 0 1.12358e+08 0.0140482 1.25723e+06 1.12957e+08 6.14169e+06 19794 5.59682e+07 0 0.103404 0.994691 0.877617 1.12358e+08 0.00218649 2.42933e+07 1.65897e+07 2.46438e+07 349 2.47275e+07 2.31394e+07 0.00198122 2.42962e+07 49.5601 0.0111301 0.995686 0 50.3582 GTEX-1JMPY-1326-SM-ARL8Y 1 B1 6 pieces; well trimmed, epidermis measured 38 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 384 692 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.992624 435758 0.967187 0.992726 0.787906 22807 1 76 0.00188344 176 0 6.39468e+07 0.0325985 541238 6.44154e+07 4.14956e+06 22839 3.18162e+07 0 0.179281 0.992726 0.782175 6.39468e+07 0.00246242 1.39399e+07 9.54754e+06 1.39937e+07 157 1.41006e+07 1.00236e+07 0.0021729 1.38416e+07 49.5364 0.00840231 0.992828 0 50.0963 GTEX-1JMPY-1426-SM-ARL8Z 1 B1 2 pieces; fat with 10-15% fibrous tissue/vessels/nerve 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 385 691 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.992985 680883 0.9712 0.993202 0.803292 22033 1 76 0.00177617 141 0 6.13113e+07 0.0284612 273361 6.1731e+07 3.66203e+06 22054 3.04927e+07 0 0.167908 0.993202 0.797831 6.13113e+07 0.00230076 1.33948e+07 7.54562e+06 1.34368e+07 148 1.36032e+07 1.11648e+07 0.00203841 1.32475e+07 49.3377 0.00442826 0.993419 0 50.0783 GTEX-1JMPY-1526-SM-ARL91 1 B1 2 pieces; intimal thickening 7.9 Blood Vessel Artery - Tibial 0007610 389 687 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.99283 489226 0.972818 0.992887 0.796735 21090 1 76 0.001803 116 0 5.03093e+07 0.0268116 247916 5.06697e+07 3.13322e+06 21110 2.50164e+07 0 0.176084 0.992887 0.791067 5.03093e+07 0.00236918 1.09523e+07 4.13399e+06 1.09398e+07 120 1.10874e+07 8.99887e+06 0.00208607 1.08105e+07 49.3677 0.00489278 0.992944 0 49.9716 GTEX-1JMPY-1626-SM-CMKGZ 1 B1 4 pieces; incomplete sections, include 20-40% attached and internal fat 6.4 Nerve Nerve - Tibial 0001323 390 686 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993625 262272 0.961787 0.994619 0.708085 24897 1 76 0.0022575 208 0 9.21262e+07 0.0379702 799447 9.26246e+07 6.81506e+06 24954 4.59021e+07 0 0.253702 0.994619 0.704275 9.21262e+07 0.00312635 2.01916e+07 8.47312e+06 2.03382e+07 216 2.03124e+07 1.19649e+07 0.00269149 2.03046e+07 49.9905 0.00863105 0.995614 0 50.1808 GTEX-1JMPZ-0004-SM-DE1JU B1 Blood Whole Blood 0013756 491 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMPZ-0004-SM-DJWX4 B1 Blood Whole Blood 0013756 491 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMPZ-0006-SM-DHXJ9 B1 8.5 Blood Whole Blood 0013756 491 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.955908 201189 0.993077 0.956595 0.835194 15117 1 76 0.00192492 185 0 1.14518e+08 0.00555858 71733 1.19714e+08 6.37715e+06 15118 5.69829e+07 0 0.157882 0.956595 0.798943 1.14518e+08 0.00224155 2.81743e+07 2.22547e+08 2.80374e+07 223 2.80994e+07 3.65044e+07 0.00208312 2.82015e+07 50.0906 0.000599203 0.957282 0 49.8782 GTEX-1JMPZ-0011-R3a-SM-EYYWX B1, A1 5.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 475 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984518 157131 0.964025 0.987193 0.860658 23430 1 76 0.00254862 272 0 7.6392e+07 0.0354974 3.88269e+06 7.7383e+07 2.77101e+06 23446 3.79933e+07 0 0.103366 0.987193 0.849636 7.6392e+07 0.0034699 1.66994e+07 8.10547e+06 1.69188e+07 276 1.68613e+07 9.64192e+06 0.00300801 1.69146e+07 50.0789 0.050175 0.989868 0 50.3263 GTEX-1JMPZ-0011-R5b-SM-EYYWY B1, A1 6 Brain Brain - Caudate (basal ganglia) 0001873 475 BP-80671 RNA isolation_PAXgene Tissue miRNA 11/17/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98438 172078 0.964059 0.986864 0.857742 23527 1 76 0.00253781 270 0 7.69462e+07 0.0356406 4.97136e+06 7.79704e+07 2.85421e+06 23544 3.82828e+07 0 0.106316 0.986864 0.846475 7.69462e+07 0.00364075 1.68323e+07 8.78317e+06 1.70685e+07 286 1.69859e+07 9.07916e+06 0.00308789 1.70725e+07 50.1272 0.0637596 0.989347 0 50.3482 GTEX-1JMPZ-0126-SM-CNPOZ 1 B1 2 pieces; 3mmx0.6mm cap of tendon [circled] on edge of 1 piece; several prominent arteries & veins in same piece 7.9 Muscle Muscle - Skeletal 0011907 737 523 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986473 347954 0.979189 0.989238 0.853714 22844 1 76 0.00571332 218 0 9.64305e+07 0.0205318 1.07509e+06 9.74796e+07 2.50378e+07 22860 4.79634e+07 0 0.125474 0.989238 0.844526 9.64305e+07 0.00824051 2.10278e+07 1.1957e+07 2.13182e+07 220 2.13703e+07 1.94791e+07 0.00697338 2.12181e+07 49.8212 0.0110289 0.992002 0 50.3429 GTEX-1JMPZ-0226-SM-CNPP1 1 B1 6 pieces; subcutaneous fat & blood vessels occupy 40% of 2 of 6 pieces; minimal dermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 740 520 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984941 355283 0.973932 0.987965 0.806955 23590 1 76 0.00599475 180 0 7.95304e+07 0.0257714 428491 8.04992e+07 2.1765e+07 23616 3.95219e+07 0 0.166978 0.987965 0.797243 7.95304e+07 0.00855919 1.72813e+07 1.10772e+07 1.73996e+07 161 1.74705e+07 1.41211e+07 0.00727305 1.74393e+07 49.9554 0.00532292 0.990988 0 50.1705 GTEX-1JMPZ-0426-SM-COH32 1 B1 2 pieces; 5% external fat 7 Nerve Nerve - Tibial 0001323 742 518 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.99235 234684 0.967178 0.993463 0.742287 24465 1 76 0.00381003 176 0 8.35001e+07 0.0325293 391481 8.40495e+07 9.24739e+06 24508 4.15948e+07 0 0.224891 0.993463 0.737435 8.35001e+07 0.00427552 1.82854e+07 8.44529e+06 1.83615e+07 177 1.83459e+07 1.31307e+07 0.00404252 1.83956e+07 50.0676 0.00465775 0.994577 0 50.1039 GTEX-1JMPZ-0526-SM-CYPT2 1 B1 2 pieces; thick adventitia & perivascular stroma up to 1.5mm 5.6 Blood Vessel Artery - Tibial 0007610 746 514 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994018 167663 0.97253 0.99476 0.792194 21805 1 76 0.00249734 143 0 6.5879e+07 0.027179 607062 6.6226e+07 4.76935e+06 21825 3.28329e+07 0 0.180336 0.99476 0.788043 6.5879e+07 0.00311395 1.42965e+07 5.72117e+06 1.43901e+07 153 1.43241e+07 1.09149e+07 0.00280541 1.44131e+07 50.1549 0.00916652 0.995503 0 50.163 GTEX-1JMPZ-0626-SM-CY8HY 1 B1 2 pieces; scattered foci of atrophy 7.4 Thyroid Thyroid 0002046 747 513 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989232 387101 0.965205 0.991383 0.738463 24081 1 76 0.0048102 131 0 7.53092e+07 0.0344697 90358 7.59638e+07 9.05245e+06 24114 3.74553e+07 0 0.226742 0.991383 0.7321 7.53092e+07 0.00769617 1.64038e+07 8.07704e+06 1.64788e+07 144 1.65394e+07 1.27469e+07 0.00625006 1.65006e+07 49.9413 0.00118949 0.993533 0 50.1141 GTEX-1JMPZ-0726-SM-CY8HZ 1 B1 6 pieces; well trimmed; minimal dermal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 748 512 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988782 367967 0.973999 0.991057 0.73343 24298 1 76 0.00490928 159 0 8.17756e+07 0.0257311 386778 8.25134e+07 9.64274e+06 24342 4.06601e+07 0 0.240568 0.991057 0.726872 8.17756e+07 0.00789736 1.79382e+07 8.41286e+06 1.80613e+07 159 1.81145e+07 1.27062e+07 0.00639989 1.80653e+07 49.932 0.00468745 0.993332 0 50.1709 GTEX-1JMPZ-0926-SM-CXZJR 1 B1 2 pieces; moderately congested 5.8 Spleen Spleen 0002106 751 509 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992369 187457 0.959725 0.993327 0.724302 24561 1 76 0.0025955 164 0 8.70734e+07 0.0396111 362205 8.76584e+07 5.85988e+06 24601 4.33532e+07 0 0.235423 0.993327 0.719469 8.70734e+07 0.00307732 1.8979e+07 1.64363e+07 1.91914e+07 186 1.91575e+07 1.28989e+07 0.00283618 1.9095e+07 49.9183 0.00413201 0.994285 0 50.2783 GTEX-1JMPZ-1026-SM-CXZJS 2 B1 2 pieces; acini & islets poorly preserved; ducts in better shape 5.7 Pancreas Pancreas 0001150 752 508 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992811 276491 0.963422 0.993955 0.729039 24779 1 76 0.00258512 147 0 8.72482e+07 0.0363283 346582 8.77788e+07 6.28613e+06 24828 4.34534e+07 0 0.234383 0.993955 0.724632 8.72482e+07 0.00313945 1.91242e+07 1.22476e+07 1.95507e+07 170 1.95195e+07 1.48728e+07 0.00286196 1.92578e+07 49.6626 0.00394835 0.995099 0 50.5513 GTEX-1JMPZ-1126-SM-ARU8X 2 B1 2 pieces; severe pulmonary vascular congestion & alveolar hemorrhage; moderate to severe fibrosis 6.7 Lung Lung 0008952 755 505 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992345 209409 0.976836 0.993381 0.796986 23009 1 76 0.00227656 128 0 5.85828e+07 0.0228108 122327 5.89731e+07 2.13548e+06 23029 2.91792e+07 0 0.17985 0.993381 0.791711 5.85828e+07 0.00293115 1.29718e+07 5.98577e+06 1.30604e+07 133 1.3038e+07 1.08178e+07 0.00260351 1.30545e+07 50.0315 0.00207428 0.994417 0 50.1702 GTEX-1JMPZ-1226-SM-ARU8Y 3 B1 6 pieces; no sign of chronic disease 5.8 Kidney Kidney - Cortex 0001225 757 503 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991684 203188 0.972253 0.992804 0.833323 23309 1 76 0.00214175 146 0 6.51058e+07 0.0274451 1.59165e+06 6.55778e+07 2.32637e+06 23331 3.24336e+07 0 0.13893 0.992804 0.827326 6.51058e+07 0.00293972 1.43421e+07 7.6953e+06 1.45223e+07 156 1.44927e+07 1.21264e+07 0.00254029 1.44469e+07 49.921 0.0242712 0.993924 0 50.3122 GTEX-1JMPZ-1426-SM-CJI3C 1 B1 2 pieces; extensive interstitial fibrosis 5.7 Heart Heart - Left Ventricle 0006566 766 494 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991894 668017 0.982606 0.993202 0.83289 21730 1 76 0.00271604 196 0 8.17647e+07 0.0171994 2.71396e+06 8.23244e+07 5.46129e+06 21750 4.06984e+07 0 0.149716 0.993202 0.827228 8.17647e+07 0.00304397 1.79311e+07 1.37428e+07 1.84588e+07 215 1.86367e+07 1.17362e+07 0.00287979 1.78497e+07 48.9215 0.0329667 0.99451 0 50.725 GTEX-1JMPZ-1626-SM-COH31 1 B1 2 pieces; fibrous tissue with mammary ducts: gynecomastoid change 5.8 Breast Breast - Mammary Tissue 0008367 778 482 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991158 152274 0.971165 0.992366 0.752566 23836 1 76 0.00387083 141 0 6.8897e+07 0.0284828 296674 6.9427e+07 7.72835e+06 23873 3.43079e+07 0 0.218599 0.992366 0.746821 6.8897e+07 0.0044907 1.51715e+07 7.09510e+06 1.52379e+07 147 1.5226e+07 1.15883e+07 0.00418039 1.52698e+07 50.0718 0.00427318 0.993573 0 50.1092 GTEX-1JMPZ-1726-SM-CNNPR 1 B1 6 pieces; mucularis with small [0.6mm] focus of squamous epithelium [labeled] 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 785 475 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 EXCLUDE 0.990959 174252 0.969556 0.99299 0.754266 24559 1 76 0.00273198 145 0 6.74045e+07 0.0301477 388781 6.78803e+07 7.73841e+06 24590 3.35387e+07 0 0.21529 0.99299 0.748979 6.74045e+07 0.0039847 1.48111e+07 7.27421e+06 1.49403e+07 150 1.49409e+07 1.05249e+07 0.00335706 1.49455e+07 50.0077 0.00572745 0.995021 0 50.2172 GTEX-1JMPZ-1826-SM-CXZJT 2 B1 6 pieces; glands autolyzed, muscle intact 6.6 Stomach Stomach 0000945 781 479 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990463 258246 0.977795 0.991804 0.792626 24225 1 76 0.00256184 321 0 1.01956e+08 0.0214374 947208 1.02798e+08 6.41186e+06 24253 5.07712e+07 0 0.185168 0.991804 0.78613 1.01956e+08 0.00346444 2.27607e+07 2.40012e+07 2.32869e+07 287 2.3243e+07 1.6917e+07 0.00301253 2.29334e+07 49.6647 0.00921422 0.993145 0 50.5714 GTEX-1JMPZ-1926-SM-E9TIT 1 B1 6 pieces; well dissected muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 786 474 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.981664 378465 0.976098 0.983405 0.824448 22891 1 76 0.002258 173 0 7.96233e+07 0.0236123 640889 8.09669e+07 3.63606e+06 22914 3.96109e+07 0 0.151649 0.983405 0.810767 7.96233e+07 0.00286895 1.7249e+07 6.66085e+06 1.74038e+07 185 1.73857e+07 1.49274e+07 0.00256294 1.74019e+07 50.0233 0.00791544 0.985146 0 50.2234 GTEX-1JMPZ-2026-SM-C1YR8 1 B1 6 pieces; well preserved epithelium; several submucosal glands 8.2 Esophagus Esophagus - Mucosa 0006920 787 473 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.985845 976134 0.973491 0.988802 0.772055 24101 1 76 0.00218575 206 0 9.26331e+07 0.0261351 326524 9.36821e+07 4.17176e+06 24134 4.60146e+07 0 0.201436 0.988802 0.76341 9.26331e+07 0.00274893 2.07052e+07 1.12291e+07 2.08556e+07 207 2.09423e+07 1.69908e+07 0.0024665 2.08737e+07 49.9179 0.00348545 0.991759 0 50.1809 GTEX-1JMPZ-2226-SM-CE6TE 1 B1 2 pieces; no normal spermatogenesis; maturation arrested; tubules not hyalinized; no Leydig cell hyperplasia 6.4 Testis Testis 0000473 790 470 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9106 06/02/2016 TruSeq.v1 EXCLUDE 0.987403 424542 0.957932 0.988935 0.700185 27023 1 76 0.00820541 122 0 6.98161e+07 0.0418745 2.37882e+06 7.05972e+07 1.11582e+07 27069 3.46993e+07 0 0.257747 0.988935 0.692438 6.98161e+07 0.00786457 1.52719e+07 7.97011e+06 1.53605e+07 132 1.54554e+07 8.55081e+06 0.00803525 1.52767e+07 49.7093 0.0336957 0.990468 0 50.1445 GTEX-1JMPZ-2326-SM-CE6RW 2 B1 2 pieces; glands moderately autolyzed 6.2 Prostate Prostate 0002367 791 469 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.987049 320858 0.960829 0.988727 0.736998 25960 1 76 0.00776242 137 0 7.93594e+07 0.0388662 427750 8.02642e+07 1.20717e+07 26002 3.9454e+07 0 0.22383 0.988727 0.728691 7.93594e+07 0.00821466 1.73391e+07 1.0604e+07 1.74244e+07 144 1.74759e+07 1.29458e+07 0.00798815 1.7423e+07 49.9242 0.00532928 0.990406 0 50.1227 GTEX-1JMPZ-2426-SM-C1YQP 2 B1 6 pieces; mucosa autolyzed, muscle intact; pericolonic fat is atrophic as in omentum 8.3 Colon Colon - Transverse 0001157 794 466 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989931 415685 0.971403 0.992153 0.795388 24724 1 76 0.00224411 207 0 8.98017e+07 0.0278084 319324 9.05119e+07 4.1258e+06 24751 4.46544e+07 0 0.176016 0.992153 0.789146 8.98017e+07 0.00270555 1.9521e+07 8.63562e+06 1.96704e+07 215 1.96854e+07 1.58295e+07 0.00247431 1.96907e+07 50.0068 0.00352798 0.994376 0 50.1905 GTEX-1JMPZ-2626-SM-ARU8Z 1 B1 6 pieces; well dissected muscularis 6.4 Colon Colon - Sigmoid 0001159 795 465 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992857 269272 0.971969 0.994022 0.793693 23256 1 76 0.00223338 150 0 6.87252e+07 0.0277489 374033 6.91385e+07 2.42912e+06 23280 3.42378e+07 0 0.178276 0.994022 0.788948 6.87252e+07 0.00301192 1.49075e+07 6.66679e+06 1.501e+07 153 1.50025e+07 1.23567e+07 0.00262219 1.49925e+07 49.9833 0.00540991 0.995187 0 50.1712 GTEX-1JMPZ-2726-SM-ARZNF 1 B1 5 pieces 6.8 Brain Brain - Cortex 0001870 830 430 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.990251 631935 0.957522 0.992282 0.796314 24169 1 76 0.00276821 135 0 6.59327e+07 0.0420738 2.15431e+06 6.64455e+07 2.74766e+06 24189 3.27402e+07 0 0.161207 0.992282 0.790169 6.59327e+07 0.00388414 1.42559e+07 1.15702e+07 1.45033e+07 160 1.45865e+07 8.96192e+06 0.00332503 1.42829e+07 49.4742 0.0324222 0.994314 0 50.43 GTEX-1JMPZ-2826-SM-C1YRA 1 B1 5 fragmented pieces 8.3 Brain Brain - Cerebellum 0002037 834 426 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.987862 903277 0.939446 0.990457 0.693716 25066 1 76 0.00231244 200 0 9.49181e+07 0.0601916 1.20586e+06 9.58326e+07 4.53668e+06 25115 4.71779e+07 0 0.24573 0.990457 0.687096 9.49181e+07 0.0027658 2.02972e+07 1.83096e+07 2.05005e+07 215 2.0583e+07 1.20308e+07 0.00253852 2.04383e+07 49.8236 0.0125829 0.993052 0 50.2491 GTEX-1JMPZ-2926-SM-C1YRG 1 B1 1 piece; no neural tissue in this cut 7.1 Pituitary Pituitary 0000007 835 425 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990153 571101 0.957152 0.992524 0.718074 25977 1 76 0.00209484 166 0 9.37306e+07 0.0425869 154963 9.44366e+07 4.41164e+06 26032 4.66153e+07 0 0.239078 0.992524 0.712705 9.37306e+07 0.00256658 2.00798e+07 1.35511e+07 2.02014e+07 195 2.02877e+07 1.46223e+07 0.00233015 2.01985e+07 49.8899 0.00164092 0.994894 0 50.1509 GTEX-1JMQI-0002-SM-DE1NG B1 Blood Whole Blood 0013756 -1287 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMQI-0002-SM-DJWWH B1 Blood Whole Blood 0013756 -1287 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMQI-0005-SM-DHXJA B1 8.7 Blood Whole Blood 0013756 -1287 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.952023 375117 0.986479 0.952928 0.827446 16462 1 76 0.00211449 184 0 1.16805e+08 0.0125646 150844 1.22575e+08 6.6223e+06 16465 5.81523e+07 0 0.159033 0.952928 0.788497 1.16805e+08 0.00263915 2.82452e+07 2.40665e+08 2.82852e+07 217 2.83212e+07 3.73575e+07 0.00237657 2.833e+07 50.0078 0.00123063 0.953833 0 50.0353 GTEX-1JMQI-0226-SM-ARZN3 1 B1 6 pieces; some plaque 6.9 Blood Vessel Artery - Aorta 0001496 515 1225 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987641 333943 0.967188 0.989676 0.748299 22336 1 76 0.00253606 127 0 6.55384e+07 0.0324961 189347 6.62221e+07 2.73511e+06 22367 3.25284e+07 0 0.218889 0.989676 0.740574 6.55384e+07 0.00398828 1.40718e+07 6.65985e+06 1.4291e+07 139 1.43501e+07 1.09832e+07 0.00326067 1.41381e+07 49.6279 0.00285927 0.991711 0 50.3864 GTEX-1JMQI-1026-SM-COH2U 1 B1 2 pieces; lobulated fat 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 571 1169 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991455 80465 0.978551 0.992655 0.832145 20828 1 76 0.00366704 119 0 4.717e+07 0.0211612 384229 4.7519e+07 5.31048e+06 20841 2.3496e+07 0 0.146406 0.992655 0.826033 4.717e+07 0.00436935 1.04064e+07 5.58181e+06 1.05106e+07 121 1.04952e+07 8.31455e+06 0.00401777 1.04807e+07 49.9656 0.0080858 0.993855 0 50.2489 GTEX-1JMQI-1126-SM-ARZN2 1 B1 2 pieces; includes portion of pleura (not target region), some collapse, some widened airspaces, congestion, edema 6 Lung Lung 0008952 563 1177 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987421 266549 0.96461 0.989752 0.712173 24118 1 76 0.00259737 116 0 6.11282e+07 0.0351282 483204 6.17611e+07 2.73538e+06 24158 3.03412e+07 0 0.252437 0.989752 0.704874 6.11282e+07 0.00412736 1.33057e+07 8.89308e+06 1.35405e+07 127 1.35969e+07 8.85085e+06 0.00336056 1.33814e+07 49.6005 0.00782375 0.992084 0 50.4373 GTEX-1JMQI-1726-SM-ARL93 1 B1 6 pieces; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 597 1143 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.991284 458058 0.968958 0.991342 0.69324 23477 1 76 0.00208009 134 0 6.60888e+07 0.0307824 864372 6.6666e+07 4.62888e+06 23520 3.28578e+07 0 0.275718 0.991342 0.687238 6.60888e+07 0.00266753 1.46279e+07 8.00018e+06 1.46349e+07 142 1.47759e+07 9.03446e+06 0.00237379 1.44956e+07 49.5211 0.0129657 0.9914 0 50.0119 GTEX-1JMQI-1826-SM-ARL94 1 B1 2 pieces; some intimal thickening, focal calcifications 7.6 Blood Vessel Artery - Tibial 0007610 693 1047 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137 02/23/2016 TruSeq.v1 RNASEQ 0.991671 647970 0.968977 0.991684 0.779235 21058 1 76 0.001964 118 0 5.43843e+07 0.0306798 209834 5.48403e+07 4.10804e+06 21072 2.7013e+07 0 0.189742 0.991684 0.772755 5.43843e+07 0.00254361 1.17544e+07 5.27394e+06 1.17514e+07 124 1.19568e+07 9.81573e+06 0.0022538 1.15552e+07 49.146 0.00382627 0.991697 0 49.9936 GTEX-1JMQI-2026-SM-CMKGP 1 B1 2 pieces; predominantly fat, 5 and 10-15% fibrous tissue/larger vessels 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 697 1043 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-,LCSET-9116 09/04/2016 TruSeq.v1 RNASEQ 0.991738 1.064e+06 0.9749 0.992703 0.776839 29010 1 76 0.00209263 745 0 4.5082e+08 0.0247346 3.58144e+06 4.54134e+08 3.4402e+07 29153 2.24615e+08 0 0.198062 0.992703 0.77117 4.5082e+08 0.00319418 9.89848e+07 5.03222e+07 9.99248e+07 592 9.97018e+07 6.85681e+07 0.00264287 9.96345e+07 49.9831 0.0078863 0.993667 0 50.2363 GTEX-1JMQI-2126-SM-CM2SC 1 B1 2 pieces; includes up to ~10% internal fat 8.3 Muscle Muscle - Skeletal 0011907 698 1042 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.994407 447473 0.978477 0.995661 0.845615 21815 1 76 0.00180837 377 0 1.13755e+08 0.0213113 1.14586e+06 1.14251e+08 5.87304e+06 21837 5.67055e+07 0 0.132862 0.995661 0.841946 1.13755e+08 0.00269028 2.49001e+07 1.05957e+07 2.50275e+07 336 2.50854e+07 2.14375e+07 0.00224877 2.49641e+07 49.8788 0.0100293 0.996915 0 50.1276 GTEX-1JMQI-2226-SM-CM2SD 1 B1 2 pieces; well trimmed, epidermis measures 33 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 702 1038 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993121 305168 0.971975 0.994344 0.795887 23695 1 76 0.00210856 192 0 8.33775e+07 0.0277871 722264 8.38518e+07 5.33534e+06 23721 4.15323e+07 0 0.176087 0.994344 0.791386 8.33775e+07 0.00279897 1.82273e+07 9.04282e+06 1.83137e+07 199 1.83438e+07 1.47078e+07 0.00245334 1.82983e+07 49.9379 0.00861358 0.995567 0 50.1182 GTEX-1JMQJ-0003-SM-DE1N6 B1 Blood Whole Blood 0013756 721 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMQJ-0003-SM-DJWY9 B1 Blood Whole Blood 0013756 721 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMQJ-0006-SM-DHXJD B1 8.4 Blood Whole Blood 0013756 721 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.961754 295864 0.989538 0.962488 0.813631 18017 1 76 0.00227538 191 0 1.21519e+08 0.00946656 189971 1.26255e+08 6.74287e+06 18026 6.05051e+07 0 0.175907 0.962488 0.783109 1.21519e+08 0.0026317 2.93474e+07 2.07169e+08 2.93321e+07 235 2.9351e+07 3.56187e+07 0.0024534 2.94331e+07 50.0699 0.00150466 0.963221 0 49.987 GTEX-1JMQJ-0011-R11a-SM-EXOJY B1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 725 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989632 408351 0.950738 0.991454 0.7594 23789 1 76 0.00219559 272 0 9.51093e+07 0.0487148 1.06305e+06 9.59291e+07 5.36615e+06 23830 4.731e+07 0 0.191339 0.991454 0.75291 9.51093e+07 0.00318704 2.05302e+07 1.0121e+07 2.06799e+07 266 2.07043e+07 1.38746e+07 0.00269041 2.0659e+07 49.9453 0.0110816 0.993275 0 50.1817 GTEX-1JMQJ-0011-R4b-SM-EXUT8 B1, A1 6.7 Brain Brain - Amygdala 0001876 725 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.987709 347546 0.968379 0.989414 0.880893 21855 1 76 0.00216056 206 0 6.85699e+07 0.0313375 4.96511e+06 6.93035e+07 2.54356e+06 21868 3.4128e+07 0 0.0874859 0.989414 0.871568 6.85699e+07 0.00263706 1.50796e+07 9.09228e+06 1.53505e+07 225 1.52746e+07 8.581e+06 0.0023984 1.52533e+07 49.965 0.071643 0.991119 0 50.4452 GTEX-1JMQJ-0011-R5a-SM-EYYXO B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 725 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98289 298343 0.964192 0.987777 0.855913 22374 1 76 0.00226588 146 0 5.71655e+07 0.0353537 3.95732e+06 5.78728e+07 2.40218e+06 22387 2.8356e+07 0 0.108279 0.987777 0.845452 5.71655e+07 0.00430959 1.24759e+07 8.35867e+06 1.2708e+07 167 1.27346e+07 6.45572e+06 0.00328268 1.26913e+07 49.9147 0.0683796 0.992665 0 50.461 GTEX-1JMQJ-0126-SM-E6CI2 0 B1 2 pieces; skeletal muscle with up to ~10% internal and attached fat/vessels, rare group of atrophic fibers 8.1 Muscle Muscle - Skeletal 0011907 851 1059 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99463 182869 0.982708 0.99596 0.867165 19999 1 76 0.00158464 198 0 8.96755e+07 0.016979 774734 9.00393e+07 5.52915e+06 20014 4.47004e+07 0 0.115543 0.99596 0.863662 8.96755e+07 0.00218762 1.86034e+07 6.62702e+06 1.87745e+07 234 1.87151e+07 2.08995e+07 0.00188573 1.87611e+07 50.0614 0.0086044 0.997289 0 50.2289 GTEX-1JMQJ-0326-SM-D5OW1 1 B1 2 pieces; atherosclerosis and medial calcification 6.9 Blood Vessel Artery - Tibial 0007610 857 1053 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.99075 134955 0.969228 0.992366 0.800551 22046 1 76 0.00377186 114 0 4.97008e+07 0.0304922 136889 5.00831e+07 5.89002e+06 22069 2.4743e+07 0 0.168677 0.992366 0.79444 4.97008e+07 0.00479447 1.08498e+07 6.70489e+06 1.09141e+07 111 1.08917e+07 8.64206e+06 0.00428233 1.09511e+07 50.1361 0.00273323 0.993983 0 50.1476 GTEX-1JMQJ-0526-SM-CYPSU 1 B1 6 pieces; well trimmed, epidermis measures 36 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 862 1048 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994016 255080 0.973052 0.994899 0.767449 23275 1 76 0.00229784 173 0 6.91624e+07 0.0266968 326140 6.9517e+07 5.00938e+06 23305 3.4476e+07 0 0.205603 0.994899 0.763534 6.91624e+07 0.00294937 1.50957e+07 7.31873e+06 1.51819e+07 154 1.5176e+07 1.19543e+07 0.00262331 1.51627e+07 49.9781 0.00469151 0.995781 0 50.1425 GTEX-1JMQJ-0726-SM-CXZJJ 2 B1 2 pieces; includes portion of rete testis, spermatogenesis is present 6.7 Testis Testis 0000473 868 1042 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990998 630118 0.919999 0.992453 0.692504 35610 1 76 0.00228735 386 0 1.30204e+08 0.0796796 1.10046e+06 1.31194e+08 9.16095e+06 35702 6.48599e+07 0 0.227495 0.992453 0.687278 1.30204e+08 0.00278364 2.6735e+07 2.00063e+07 2.7115e+07 331 2.72048e+07 2.00942e+07 0.00253513 2.68126e+07 49.637 0.00838805 0.993909 0 50.3529 GTEX-1JMQJ-0826-SM-CNPP7 1 B1 6 pieces; well trimmed, only focal attached fat 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 917 993 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.9836 380758 0.970021 0.986774 0.786519 23614 1 76 0.0059565 160 0 7.82972e+07 0.0297447 621531 7.93466e+07 2.18922e+07 23646 3.89073e+07 0 0.183502 0.986774 0.776117 7.82972e+07 0.00862845 1.70428e+07 1.46655e+07 1.72263e+07 162 1.72896e+07 1.20739e+07 0.00728818 1.72223e+07 49.9026 0.00783311 0.989949 0 50.2677 GTEX-1JMQJ-1026-SM-CNPP8 2 B1 6 pieces; target muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 921 989 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983919 289462 0.968739 0.987036 0.80198 23691 1 76 0.00598081 136 0 7.55004e+07 0.0310349 998305 7.64921e+07 2.07563e+07 23717 3.751e+07 0 0.166758 0.987036 0.791584 7.55004e+07 0.00849586 1.59883e+07 8.18153e+06 1.6244e+07 158 1.62794e+07 1.13766e+07 0.00723437 1.6171e+07 49.8329 0.0130511 0.990153 0 50.3966 GTEX-1JMQJ-1126-SM-CY8HO 1 B1 6 pieces; target muscularis 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 922 988 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988283 421525 0.965825 0.990465 0.780679 23812 1 76 0.00488972 146 0 7.59116e+07 0.0339596 1.26068e+06 7.66424e+07 9.26314e+06 23841 3.77336e+07 0 0.185146 0.990465 0.773235 7.59116e+07 0.00794662 1.63249e+07 7.40773e+06 1.65414e+07 171 1.65185e+07 1.02744e+07 0.0064148 1.65063e+07 49.9814 0.0164489 0.992646 0 50.3294 GTEX-1JMQJ-1226-SM-D3L97 1 B1 6 pieces; mucosa, prominent muscularis mucosae 8.3 Esophagus Esophagus - Mucosa 0006920 924 986 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989588 458280 0.976552 0.991962 0.710609 23905 1 76 0.00285997 210 0 1.06603e+08 0.0230897 953887 1.07467e+08 1.15162e+07 23952 5.30332e+07 0 0.265943 0.991962 0.704897 1.06603e+08 0.00385586 2.40191e+07 1.49245e+07 2.42169e+07 245 2.42899e+07 1.71832e+07 0.00335672 2.41901e+07 49.8971 0.00887609 0.994335 0 50.205 GTEX-1JMQJ-1326-SM-D4P3B 2 B1 6 pieces; full thickness sections 6.3 Stomach Stomach 0000945 926 984 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.986781 117449 0.982647 0.988379 0.84424 22637 1 76 0.00238283 294 0 6.67059e+07 0.0168859 754472 6.74902e+07 8.12547e+06 22652 3.3191e+07 0 0.138407 0.988379 0.834429 6.67059e+07 0.00404366 1.53639e+07 7.0424e+07 1.55076e+07 199 1.55027e+07 1.78235e+07 0.0032119 1.54801e+07 49.9635 0.011179 0.989977 0 50.2328 GTEX-1JMQJ-1726-SM-E9U4V 2 B1 6 pieces; glomeruli in all sections, some sclerotic/diabetic glomerulosclerosis 6.2 Kidney Kidney - Cortex 0001225 936 974 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.987661 236429 0.972769 0.988616 0.847275 23348 1 76 0.00178024 166 0 7.32464e+07 0.0269434 3.18919e+06 7.40899e+07 2.55107e+06 23368 3.65043e+07 0 0.125494 0.988616 0.837629 7.32464e+07 0.0026666 1.62635e+07 8.33478e+06 1.64597e+07 196 1.64022e+07 1.26836e+07 0.00222299 1.63951e+07 49.9892 0.0430449 0.98957 0 50.2998 GTEX-1JMQJ-1926-SM-D4P3A 1 B1 2 pieces; mature fat 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 938 972 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992439 115035 0.976387 0.993745 0.800425 23181 1 76 0.00296579 140 0 6.70525e+07 0.0232874 719289 6.74745e+07 8.27612e+06 23200 3.33899e+07 0 0.175961 0.993745 0.795419 6.70525e+07 0.00404527 1.47137e+07 7.98191e+06 1.49011e+07 153 1.4872e+07 1.13731e+07 0.00350482 1.48315e+07 49.9318 0.0106602 0.99505 0 50.3164 GTEX-1JMQJ-2026-SM-CNPP9 1 B1 2 pieces 6.7 Thyroid Thyroid 0002046 939 971 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98368 337811 0.969106 0.986962 0.723661 25610 1 76 0.00574517 167 0 9.51615e+07 0.030577 248423 9.64186e+07 2.50728e+07 25657 4.72841e+07 0 0.245445 0.986962 0.714226 9.51615e+07 0.0088359 2.08631e+07 1.27697e+07 2.09597e+07 175 2.1092e+07 1.4764e+07 0.00728539 2.1027e+07 49.9228 0.00257651 0.990244 0 50.1155 GTEX-1JMQJ-2126-SM-CNPPA 1 B1 2 pieces; some congestion/edema 5.9 Lung Lung 0008952 939 971 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.982497 257325 0.970797 0.985534 0.742439 25071 1 76 0.00616392 155 0 8.7271e+07 0.0289115 908475 8.85519e+07 2.36691e+07 25107 4.33453e+07 0 0.228358 0.985534 0.731699 8.7271e+07 0.00850052 1.91298e+07 1.07207e+07 1.93341e+07 175 1.93709e+07 1.16544e+07 0.00732862 1.935e+07 49.973 0.0102592 0.988572 0 50.2656 GTEX-1JMQJ-2426-SM-E9TIL 1 B1 6 pieces; mild plaque 6 Blood Vessel Artery - Aorta 0001496 942 968 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.965597 291271 0.976071 0.967145 0.802784 22634 1 76 0.0021424 176 0 8.35213e+07 0.0235401 238217 8.63586e+07 3.6547e+06 22656 4.15264e+07 0 0.173287 0.967145 0.776409 8.35213e+07 0.00281272 1.80294e+07 7.30956e+06 1.82429e+07 193 1.8189e+07 1.57131e+07 0.00247703 1.82171e+07 50.0386 0.00275846 0.968693 0 50.2943 GTEX-1JMQJ-2526-SM-CY8HP 1 B1 2 pieces; severe calcific atherosclerosis with narrowing of the lumen, 10-20% attachment of fat, inflammatory cells 6.2 Blood Vessel Artery - Coronary 0001621 945 965 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769,LCSET-9874 09/29/2016 TruSeq.v1 RNASEQ 0.987817 265271 0.96897 0.989112 0.743938 25032 1 76 0.00390459 165 0 8.88922e+07 0.0302012 381426 8.98707e+07 8.6124e+06 25074 4.4141e+07 0 0.225033 0.989112 0.735838 8.88922e+07 0.0057078 1.95667e+07 1.11047e+07 1.95108e+07 182 1.97334e+07 1.46373e+07 0.00480501 1.94622e+07 49.6541 0.00424416 0.990407 0 49.9284 GTEX-1JMQJ-2626-SM-CY8HQ 2 B1 6 pieces; target muscularis, few strips of residual autolyzed mucosa (not target) 6.8 Colon Colon - Sigmoid 0001159 948 962 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989982 277764 0.971614 0.991971 0.818798 23394 1 76 0.00473965 135 0 6.97997e+07 0.0281183 551968 7.03647e+07 8.44085e+06 23414 3.47197e+07 0 0.152816 0.991971 0.812223 6.97997e+07 0.00741549 1.50102e+07 5.84181e+06 1.51418e+07 152 1.51407e+07 1.20584e+07 0.00607489 1.5147e+07 50.0104 0.00784439 0.993959 0 50.2181 GTEX-1JMQJ-2926-SM-D5OV4 1 B1 1 piece; adenohypophysis and neurohypophysis 7.5 Pituitary Pituitary 0000007 979 931 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.989758 261881 0.958073 0.991554 0.744127 24924 1 76 0.00417276 123 0 6.74765e+07 0.0416377 335631 6.80513e+07 1.0089e+07 24960 3.3574e+07 0 0.213947 0.991554 0.737842 6.74765e+07 0.00481767 1.44603e+07 1.0732e+07 1.46564e+07 131 1.46766e+07 1.10163e+07 0.00449463 1.45554e+07 49.7928 0.00493203 0.993349 0 50.3366 GTEX-1JMQJ-3026-SM-D5OVS 1 B1 4 pieces; some residual meninges 6.3 Brain Brain - Cortex 0001870 981 929 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 EXCLUDE 0.990068 110346 0.961076 0.991651 0.815266 21402 1 76 0.00412089 135 0 5.09306e+07 0.0386725 2.18449e+06 5.13593e+07 7.06713e+06 21416 2.5359e+07 0 0.14581 0.991651 0.808459 5.09306e+07 0.00489614 1.11427e+07 5.77797e+06 1.14761e+07 131 1.13372e+07 6.19594e+06 0.0045079 1.13555e+07 50.0405 0.0425334 0.993235 0 50.737 GTEX-1JMQJ-3126-SM-EV79G 2 B1 4 pieces (fragmented) 6.6 Brain Brain - Cerebellum 0002037 983 927 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989632 838142 0.933529 0.9907 0.715633 25305 1 76 0.00264455 272 0 1.14421e+08 0.0661288 1.99288e+06 1.15496e+08 1.19122e+07 25346 5.69777e+07 0 0.217896 0.9907 0.708978 1.14421e+08 0.00382217 2.4225e+07 3.64509e+07 2.46545e+07 312 2.46389e+07 1.34218e+07 0.00323272 2.43588e+07 49.7141 0.017255 0.991768 0 50.4394 GTEX-1JMQK-0004-SM-DE1NE B1 Blood Whole Blood 0013756 714 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMQK-0004-SM-DJWWF B1 Blood Whole Blood 0013756 714 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMQK-0005-SM-CNPOE B1 8.3 Blood Whole Blood 0013756 714 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.981579 686639 0.970685 0.984374 0.775751 20834 1 76 0.00622203 136 0 9.31559e+07 0.0274299 293336 9.46347e+07 2.33486e+07 20852 4.62294e+07 0 0.194934 0.984374 0.763629 9.31559e+07 0.00890953 2.07685e+07 5.52259e+07 2.09361e+07 158 2.10537e+07 1.77986e+07 0.00756197 2.09146e+07 49.8342 0.00309967 0.987169 0 50.201 GTEX-1JMQK-0011-R2a-SM-EYYXQ B1, A1 7.5 Brain Brain - Substantia nigra 0002038 683 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98333 226993 0.965066 0.987489 0.843667 22696 1 76 0.00219619 182 0 6.30762e+07 0.034617 2.90643e+06 6.38754e+07 2.74973e+06 22715 3.13126e+07 0 0.121399 0.987489 0.833112 6.30762e+07 0.00393481 1.38826e+07 5.81633e+06 1.41787e+07 178 1.41266e+07 9.08897e+06 0.00306184 1.41838e+07 50.101 0.0455015 0.991647 0 50.5277 GTEX-1JMQK-0011-R7b-SM-EXUTF B1, A1 7.8 Brain Brain - Putamen (basal ganglia) 0001874 683 BP-81741 RNA isolation_PAXgene Tissue miRNA 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99097 466304 0.971664 0.992157 0.866274 22082 1 76 0.00153733 198 0 6.82043e+07 0.0281032 5.40195e+06 6.87435e+07 2.12401e+06 22091 3.39608e+07 0 0.10539 0.992157 0.859479 6.82043e+07 0.00212035 1.50113e+07 9.99213e+06 1.53202e+07 248 1.5234e+07 6.72082e+06 0.00182849 1.51625e+07 49.8825 0.0785812 0.993344 0 50.5092 GTEX-1JMQK-0126-SM-CM2S3 1 B1 2 pieces; 5% vascular content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 929 511 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993032 387697 0.977927 0.994459 0.830407 21182 1 76 0.00193916 147 0 6.77089e+07 0.0217759 577966 6.80862e+07 3.96455e+06 21199 3.37161e+07 0 0.14752 0.994459 0.825806 6.77089e+07 0.00262249 1.48762e+07 6.11384e+06 1.49849e+07 170 1.49964e+07 1.19489e+07 0.00228033 1.49588e+07 49.9372 0.00848874 0.995887 0 50.1819 GTEX-1JMQK-0226-SM-CL543 0 B1 6 pieces; well trimmed; <5% dermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 934 506 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992912 420042 0.975008 0.994283 0.807015 24624 1 76 0.00261444 395 0 1.17248e+08 0.0247175 721948 1.17922e+08 1.58086e+07 24664 5.84008e+07 0 0.167993 0.994283 0.802401 1.17248e+08 0.00350665 2.56579e+07 1.27935e+07 2.58162e+07 353 2.58413e+07 2.12563e+07 0.00305993 2.5789e+07 49.9494 0.00612224 0.995653 0 50.1538 GTEX-1JMQK-0326-SM-ARZN5 1 B1 2 pieces; 10% fat content 8.2 Muscle Muscle - Skeletal 0011907 936 504 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.99086 587029 0.980241 0.992923 0.846356 19892 1 76 0.00198209 173 0 6.88539e+07 0.0195447 774683 6.93447e+07 2.37648e+06 19910 3.42182e+07 0 0.133886 0.992923 0.840366 6.88539e+07 0.00331098 1.50705e+07 7.63762e+06 1.52703e+07 166 1.53816e+07 1.41442e+07 0.00264515 1.50805e+07 49.5058 0.0111715 0.994986 0 50.3293 GTEX-1JMQK-0426-SM-CL544 0 B1 3 pieces; 10% internal fat content 7.6 Nerve Nerve - Tibial 0001323 937 503 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990759 500466 0.964242 0.992523 0.714801 24432 1 76 0.00267641 182 0 8.67351e+07 0.0355215 268571 8.73885e+07 1.1496e+07 24475 4.31631e+07 0 0.249441 0.992523 0.709457 8.67351e+07 0.00402014 1.90093e+07 7.51476e+06 1.90882e+07 185 1.91248e+07 1.2651e+07 0.00334708 1.91209e+07 49.9949 0.0030733 0.994287 0 50.1036 GTEX-1JMQK-0526-SM-CM2S4 1 B1 2 pieces; 1 with large eccentric fibrotic intimal plaque; small calcific intimal deposits in both pieces 6.9 Blood Vessel Artery - Tibial 0007610 938 502 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993579 297401 0.970355 0.99461 0.792842 22257 1 76 0.00204557 274 0 9.8722e+07 0.0293517 654597 9.92569e+07 6.12499e+06 22298 4.91667e+07 0 0.177513 0.99461 0.788569 9.8722e+07 0.00261476 2.12375e+07 7.78885e+06 2.12946e+07 295 2.12945e+07 1.687e+07 0.00232987 2.13385e+07 50.0516 0.00659498 0.995642 0 50.0672 GTEX-1JMQK-0626-SM-D4P2R 1 B1 2 pieces; scattered patchy areas of mild interstitial fibrosis [<5%]; hypereosinophilic fibers suggestive of early ischemia 6.7 Heart Heart - Left Ventricle 0006566 940 500 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994095 342895 0.982175 0.995554 0.850988 22574 1 76 0.00225243 371 0 1.18991e+08 0.0176451 6.83349e+06 1.19522e+08 1.43469e+07 22599 5.9314e+07 0 0.131187 0.995554 0.847205 1.18991e+08 0.00340908 2.61934e+07 1.80209e+07 2.69401e+07 341 2.7005e+07 1.87153e+07 0.00282991 2.62799e+07 49.3196 0.0571734 0.997014 0 50.7026 GTEX-1JMQK-0926-SM-ARL96 1 B1 2 pieces; 40% fibrofatty content in 1 piece 6.3 Heart Heart - Atrial Appendage 0006631 946 494 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.990804 517552 0.974727 0.991001 0.771062 22001 1 76 0.00185198 121 0 5.94037e+07 0.0250416 1.77087e+06 5.99431e+07 4.41919e+06 22018 2.95123e+07 0 0.203665 0.991001 0.764124 5.94037e+07 0.00246178 1.28938e+07 8.0028e+06 1.29742e+07 145 1.32027e+07 8.49221e+06 0.00215682 1.26744e+07 48.9792 0.0295425 0.991199 0 50.1555 GTEX-1JMQK-1126-SM-CXZJW 1 B1 2 pieces; moderately congested 5.8 Spleen Spleen 0002106 947 493 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991073 275217 0.955477 0.992619 0.736874 24243 1 76 0.00238485 164 0 8.08707e+07 0.0438134 741435 8.1472e+07 5.34177e+06 24283 4.02464e+07 0 0.218603 0.992619 0.731435 8.08707e+07 0.00359859 1.74526e+07 1.34446e+07 1.77662e+07 191 1.77461e+07 1.044e+07 0.00299077 1.75987e+07 49.7916 0.00910049 0.994164 0 50.4452 GTEX-1JMQK-1226-SM-D4P2S 0 B1 6 pieces; dermal fat 5%; well dissected 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 951 489 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992587 406512 0.974159 0.994236 0.794106 24034 1 76 0.00251533 287 0 1.00468e+08 0.0256464 744662 1.01051e+08 1.33265e+07 24069 5.00486e+07 0 0.180052 0.994236 0.789529 1.00468e+08 0.00358331 2.20576e+07 1.32883e+07 2.24103e+07 267 2.23807e+07 1.70008e+07 0.00304843 2.22475e+07 49.8507 0.00736918 0.995885 0 50.3966 GTEX-1JMQK-1326-SM-CNPOR 0 B1 2 pieces; fibrous content <5% 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 952 488 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985995 274219 0.9798 0.988946 0.825429 23154 1 76 0.00553927 148 0 7.53629e+07 0.0199289 432137 7.62052e+07 1.89686e+07 23174 3.74676e+07 0 0.15437 0.988946 0.816305 7.53629e+07 0.00826061 1.65682e+07 9.50665e+06 1.6726e+07 156 1.67806e+07 1.4336e+07 0.00689588 1.67295e+07 49.9237 0.0056707 0.991898 0 50.2371 GTEX-1JMQK-1826-SM-CY8I1 2 B1 6 pieces; well dissected but not well preserved 5.9 Esophagus Esophagus - Muscularis 0004648 963 477 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989064 189823 0.971241 0.991381 0.789658 22114 1 76 0.00461499 122 0 5.89840e+07 0.0285999 1.22947e+06 5.94968e+07 7.00293e+06 22134 2.93382e+07 0 0.181583 0.991381 0.782853 5.89840e+07 0.00786836 1.29499e+07 5.82364e+06 1.31204e+07 142 1.31154e+07 7.90461e+06 0.00623787 1.3085e+07 49.942 0.0206644 0.993699 0 50.3269 GTEX-1JMQK-1926-SM-CJI3B 2 B1 6 pieces; moderate interstitial fibrosis 6.5 Kidney Kidney - Cortex 0001225 964 476 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99185 802604 0.974981 0.993288 0.835424 23896 1 76 0.00205787 204 0 8.45373e+07 0.0246049 3.10837e+06 8.51085e+07 5.40954e+06 23916 4.20752e+07 0 0.139557 0.993288 0.829817 8.45373e+07 0.00246488 1.86866e+07 1.16847e+07 1.91203e+07 245 1.91742e+07 1.31374e+07 0.00226108 1.87503e+07 49.4412 0.0365224 0.994726 0 50.5735 GTEX-1JMQK-2026-SM-C1YQN 2 B1 6 pieces; epithelium partially sloughed 6.4 Esophagus Esophagus - Mucosa 0006920 965 475 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990056 529216 0.970872 0.992473 0.785948 24219 1 76 0.00185446 207 0 9.34167e+07 0.0289315 361893 9.41252e+07 4.24573e+06 24252 4.64904e+07 0 0.184924 0.992473 0.780032 9.34167e+07 0.00239953 2.06925e+07 1.00218e+07 2.08692e+07 243 2.0905e+07 1.58617e+07 0.00212633 2.08692e+07 49.9572 0.0038448 0.99489 0 50.2126 GTEX-1JMQK-2126-SM-CY8I2 1 B1 2 pieces; focus of gland disruption wiith lymphoid cells and small foci of fibrosis 6.1 Thyroid Thyroid 0002046 966 474 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988696 197549 0.967387 0.990941 0.73274 22654 1 76 0.00460546 116 0 5.17536e+07 0.0324001 253411 5.22268e+07 5.89776e+06 22675 2.57365e+07 0 0.234647 0.990941 0.726102 5.17536e+07 0.00780541 1.13133e+07 5.07612e+06 1.13734e+07 122 1.14029e+07 7.4807e+06 0.00620181 1.13936e+07 49.9796 0.00485213 0.993186 0 50.1326 GTEX-1JMQK-2226-SM-ARU8U 2 B1 2 pieces; glands evenly distributed 5.9 Prostate Prostate 0002367 970 470 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992097 205977 0.965975 0.993173 0.768593 23624 1 76 0.00212465 133 0 6.05718e+07 0.0337653 642270 6.09882e+07 2.27855e+06 23647 3.01699e+07 0 0.197382 0.993173 0.763345 6.05718e+07 0.00283526 1.3286e+07 6.29252e+06 1.34454e+07 148 1.34233e+07 8.88932e+06 0.00247957 1.33725e+07 49.9052 0.0105311 0.994248 0 50.2981 GTEX-1JMQK-2326-SM-ARZN4 1 B1 6 pieces; all have small remnants of autolyzed mucosa (labeled); muscle intact 6.2 Colon Colon - Sigmoid 0001159 971 469 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987069 505089 0.962237 0.989086 0.779876 23124 1 76 0.00246861 143 0 7.29131e+07 0.0375328 666728 7.37177e+07 3.2459e+06 23149 3.62169e+07 0 0.182361 0.989086 0.771364 7.29131e+07 0.00348762 1.54397e+07 1.38422e+07 1.58654e+07 161 1.59272e+07 1.24957e+07 0.00297707 1.55169e+07 49.3476 0.00904435 0.991103 0 50.6799 GTEX-1JMQK-2426-SM-CXZJU 1 B1 6 pieces; 10 small lymphoid nodules in autolyzed mucosa (circled) LCM 5.8 Small Intestine Small Intestine - Terminal Ileum 0001211 971 469 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991837 135271 0.96937 0.993098 0.784611 24369 1 76 0.0020989 177 0 7.94733e+07 0.0303517 496041 8.00256e+07 5.33944e+06 24398 3.95785e+07 0 0.184759 0.993098 0.779196 7.94733e+07 0.00304485 1.72797e+07 8.13889e+06 1.75893e+07 185 1.75207e+07 1.38459e+07 0.00257127 1.74524e+07 49.9023 0.00619853 0.994359 0 50.4439 GTEX-1JMQK-2626-SM-COH2W 1 B1 2 pieces; fibrous stroma with mammary ducts: gynecomastoid change 5.7 Breast Breast - Mammary Tissue 0008367 974 466 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.989962 236421 0.970703 0.991618 0.756387 23693 1 76 0.00364821 147 0 6.92599e+07 0.0290938 309314 6.98454e+07 7.86045e+06 23728 3.44754e+07 0 0.214316 0.991618 0.750048 6.92599e+07 0.00448498 1.52047e+07 7.07515e+06 1.53211e+07 155 1.53017e+07 1.06919e+07 0.0040659 1.5339e+07 50.0608 0.00442855 0.993275 0 50.1906 GTEX-1JMQK-2726-SM-CNNPI 2 B1 2 pieces; 1 contains focus of rete testis <10% area [circled] 6.3 Testis Testis 0000473 975 465 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991116 321752 0.94513 0.993054 0.734403 32569 1 76 0.00243888 276 0 1.09171e+08 0.0546471 2.09986e+06 1.09935e+08 1.1499e+07 32643 5.43694e+07 0 0.210727 0.993054 0.729302 1.09171e+08 0.00349715 2.34307e+07 1.40455e+07 2.37242e+07 289 2.37836e+07 1.48245e+07 0.00296698 2.35585e+07 49.7623 0.019101 0.994993 0 50.3111 GTEX-1JMQK-2826-SM-CXZJV 1 B1 1 piece; 60% neuro, 40% adenohypophysis 7 Pituitary Pituitary 0000007 1023 417 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993337 496887 0.955216 0.994515 0.740376 26262 1 76 0.00218986 275 0 1.05405e+08 0.0445524 344800 1.05986e+08 6.88223e+06 26313 5.25213e+07 0 0.21484 0.994515 0.736315 1.05405e+08 0.00267514 2.27047e+07 1.6289e+07 2.30764e+07 289 2.30869e+07 1.63647e+07 0.00243222 2.2819e+07 49.7082 0.00325325 0.995692 0 50.406 GTEX-1JMQK-2926-SM-D4P2T 1 B1 4 pieces well dissected 7 Brain Brain - Cerebellum 0002037 1024 416 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991832 717071 0.943667 0.993279 0.709809 26037 1 76 0.00253477 375 0 1.56817e+08 0.0560039 2.77214e+06 1.57878e+08 1.80877e+07 26098 7.8102e+07 0 0.233858 0.993279 0.705039 1.56817e+08 0.00391757 3.36748e+07 3.38623e+07 3.40531e+07 338 3.41125e+07 1.78756e+07 0.00322516 3.38132e+07 49.7797 0.0175588 0.994727 0 50.2793 GTEX-1JMQK-3026-SM-ARL95 1 B1 4 pieces 6.3 Brain Brain - Cortex 0001870 1025 415 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.991198 651229 0.966647 0.991751 0.8132 23108 1 76 0.00174017 158 0 6.46938e+07 0.0330872 4.54834e+06 6.52319e+07 4.67792e+06 23121 3.21378e+07 0 0.153447 0.991751 0.806492 6.46938e+07 0.00232761 1.41133e+07 1.51064e+07 1.4227e+07 197 1.43891e+07 6.88638e+06 0.00203372 1.39685e+07 49.2584 0.0697258 0.992303 0 50.2007 GTEX-1JMQL-0004-SM-DE1KB B1 Blood Whole Blood 0013756 574 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JMQL-0004-SM-DJWX7 B1 Blood Whole Blood 0013756 574 BP-60758 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JMQL-0006-SM-DHXJB B1 7.2 Blood Whole Blood 0013756 574 BP-60761 RNA isolation_PAXgene Blood RNA (Manual) 02/23/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.966729 181072 0.990948 0.967448 0.831378 17656 1 76 0.00224148 145 0 1.06935e+08 0.00817239 171567 1.10534e+08 5.60692e+06 17659 5.32688e+07 0 0.15957 0.967448 0.804314 1.06935e+08 0.00274506 2.57572e+07 1.78125e+08 2.58215e+07 192 2.58286e+07 3.25053e+07 0.00249308 2.58411e+07 50.0121 0.00155217 0.968166 0 50.0623 GTEX-1JMQL-0126-SM-CY8HN 0 B1 2 pieces, ~5-10% interstitial fat/vascular elements, rep. delineated 7.3 Muscle Muscle - Skeletal 0011907 874 602 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99028 414826 0.981581 0.992232 0.818263 21175 1 76 0.00452863 158 0 8.8191e+07 0.0181764 863743 8.88814e+07 1.02452e+07 21195 4.39016e+07 0 0.163318 0.992232 0.811907 8.8191e+07 0.00746436 1.89446e+07 8.45819e+06 1.91523e+07 173 1.91825e+07 1.75009e+07 0.00599361 1.9069e+07 49.8517 0.00971792 0.994185 0 50.2727 GTEX-1JMQL-0226-SM-CNPP5 0 B1 2 pieces, minimal dermal fat; squamous epithelium is ~50 microns 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 876 600 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.981962 263840 0.972477 0.985393 0.716987 22633 1 76 0.00631848 133 0 7.50157e+07 0.0272264 846211 7.61277e+07 2.11399e+07 22670 3.72532e+07 0 0.25549 0.985393 0.706513 7.50157e+07 0.00888458 1.64907e+07 1.11333e+07 1.65942e+07 137 1.66856e+07 1.0933e+07 0.00759706 1.66452e+07 49.9394 0.0111157 0.988823 0 50.1565 GTEX-1JMQL-0326-SM-CNPP6 0 B1 2 pieces, ~15% fascia/vascular elements, rep delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 877 599 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985042 200699 0.980547 0.988039 0.748416 23147 1 76 0.00576511 167 0 9.16772e+07 0.0190915 1.183e+06 9.2787e+07 2.23443e+07 23187 4.5573e+07 0 0.23213 0.988039 0.739464 9.16772e+07 0.0088132 2.03134e+07 1.01633e+07 2.04326e+07 175 2.05196e+07 1.48773e+07 0.00728453 2.04912e+07 49.9654 0.0127497 0.991036 0 50.1463 GTEX-1JMQL-0526-SM-CM2RG 0 B1 2 pieces, small muscular artery, Monckeberg sclerosis delineated; focal atherosis. 6.1 Blood Vessel Artery - Tibial 0007610 880 596 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-9115 07/13/2016 TruSeq.v1 EXCLUDE 0.99201 266600 0.969765 0.993138 0.718466 24109 1 76 0.00235517 181 0 8.79252e+07 0.0299629 366862 8.85328e+07 6.00309e+06 24154 4.37724e+07 0 0.251299 0.993138 0.713536 8.79252e+07 0.0030263 1.92425e+07 8.7233e+06 1.93415e+07 198 1.93467e+07 1.30981e+07 0.00269036 1.93381e+07 49.9889 0.0041438 0.994265 0 50.1283 GTEX-1JMQL-0926-SM-CJI3F 1 B1 2 pieces, no abnormalities 6.2 Thyroid Thyroid 0002046 927 549 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.988287 478712 0.969809 0.989298 0.76534 23418 1 76 0.00228781 143 0 7.1629e+07 0.029931 475953 7.24038e+07 4.51214e+06 23439 3.56646e+07 0 0.204469 0.989298 0.75715 7.1629e+07 0.00302514 1.56896e+07 8.56581e+06 1.5848e+07 163 1.58608e+07 1.11214e+07 0.0026561 1.57487e+07 49.8227 0.00657359 0.99031 0 50.251 GTEX-1JMQL-1026-SM-CMKGV 1 B1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 928 548 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993328 223007 0.973085 0.994485 0.768532 23646 1 76 0.00224413 271 0 1.00234e+08 0.0266972 3.73242e+06 1.0079e+08 6.84187e+06 23689 4.99457e+07 0 0.204553 0.994485 0.764294 1.00234e+08 0.00347874 2.16197e+07 9.81863e+06 2.18316e+07 277 2.1784e+07 1.42643e+07 0.00286072 2.17794e+07 49.9948 0.0370316 0.995642 0 50.2439 GTEX-1JMQL-1126-SM-CKZOP 1 B1 2 pieces, moderate congestion/edema 5.7 Lung Lung 0008952 931 545 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.988705 205237 0.972011 0.991231 0.802106 23384 1 76 0.00230765 158 0 7.49429e+07 0.0277242 586381 7.56059e+07 7.02686e+06 23414 3.72809e+07 0 0.169905 0.991231 0.795072 7.49429e+07 0.00431033 1.64097e+07 8.73868e+06 1.65349e+07 178 1.65416e+07 1.25355e+07 0.00330644 1.6584e+07 50.064 0.00775576 0.993757 0 50.1901 GTEX-1JMQL-1426-SM-CL54J 1 B1 6 pieces, confirmed target muscularis 6 Esophagus Esophagus - Muscularis 0004648 938 538 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.990557 309864 0.970148 0.992173 0.741318 23713 1 76 0.00286557 206 0 9.46547e+07 0.0296368 1.44181e+06 9.54014e+07 1.17624e+07 23758 4.71022e+07 0 0.22883 0.992173 0.735515 9.46547e+07 0.00428346 2.06321e+07 9.07656e+06 2.08737e+07 224 2.08932e+07 1.26176e+07 0.00357336 2.07624e+07 49.843 0.0151131 0.993789 0 50.291 GTEX-1JMQL-2226-SM-CNPP4 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~50-60 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 951 525 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983615 250115 0.974483 0.9869 0.732816 23212 1 76 0.00608584 133 0 7.26592e+07 0.0252466 643451 7.36237e+07 1.89809e+07 23251 3.60942e+07 0 0.241667 0.9869 0.723217 7.26592e+07 0.00894817 1.61017e+07 9.78121e+06 1.61884e+07 138 1.62626e+07 1.09728e+07 0.00751224 1.62566e+07 49.9907 0.00873973 0.990186 0 50.1343 GTEX-1JMQL-2326-SM-CNNPV 1 B1 6 pieces, squamous mucosa up to ~0.1mm 5.6 Vagina Vagina 0000996 955 521 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989799 187733 0.97271 0.992125 0.750583 22366 1 76 0.00272329 166 0 7.85717e+07 0.0271162 522200 7.91953e+07 9.30743e+06 22391 3.91014e+07 0 0.222127 0.992125 0.744672 7.85717e+07 0.00397773 1.75551e+07 8.93902e+06 1.76932e+07 186 1.76971e+07 1.0649e+07 0.00334904 1.77309e+07 50.0477 0.00659383 0.994452 0 50.1958 GTEX-1JMQL-2426-SM-CNNPW 3 B1 6 pieces, target mucosa up to ~0.25mm, advanced autolysis with epithelial mucosa largely sloughed 5.7 Colon Colon - Transverse 0001157 958 518 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 EXCLUDE 0.989191 199240 0.976316 0.991685 0.78557 21639 1 76 0.00250589 177 0 7.68266e+07 0.0234693 1.22975e+06 7.74707e+07 8.33028e+06 21658 3.82224e+07 0 0.190745 0.991685 0.779039 7.68266e+07 0.00436563 1.66772e+07 1.05832e+07 1.68404e+07 191 1.6827e+07 1.11015e+07 0.00343342 1.6877e+07 50.0742 0.0158738 0.99418 0 50.2434 GTEX-1JMQL-2826-SM-ARU91 1 B1 4 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 995 481 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.991791 362250 0.962991 0.993172 0.81014 25762 1 76 0.00232877 270 0 8.27034e+07 0.0367573 4.47185e+06 8.3272e+07 2.86514e+06 25786 4.12003e+07 0 0.152851 0.993172 0.804608 8.27034e+07 0.00312077 1.81405e+07 1.15574e+07 1.84723e+07 285 1.84017e+07 9.13582e+06 0.00272422 1.83022e+07 49.8644 0.0537017 0.994552 0 50.4531 GTEX-1JMQL-2926-SM-CXZJI 1 B1 5 pieces (fragmented) no abnormalities 5.6 Brain Brain - Cerebellum 0002037 996 480 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 EXCLUDE 0.991835 993696 0.917642 0.993457 0.748396 25218 1 76 0.0024281 370 0 9.4517e+07 0.0821594 5.69244e+06 9.51396e+07 6.36298e+06 25248 4.70746e+07 0 0.169245 0.993457 0.743499 9.4517e+07 0.00327084 1.95138e+07 4.9886e+07 2.05038e+07 347 2.04245e+07 7.31214e+06 0.00284878 1.97444e+07 49.1534 0.0598325 0.995078 0 51.237 GTEX-1JMQL-3026-SM-D4P2Q 1 B1 1 piece mainly adenohypophysis; ~3.5x1mm nubbin of neurohypophysis delineated 6 Pituitary Pituitary 0000007 997 479 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992296 416868 0.960071 0.993896 0.717656 25029 1 76 0.00263447 205 0 1.05865e+08 0.0396718 759763 1.06516e+08 1.38578e+07 25086 5.27209e+07 0 0.242415 0.993896 0.713276 1.05865e+08 0.00368883 2.32448e+07 2.18446e+07 2.36354e+07 245 2.36481e+07 1.46838e+07 0.0031608 2.33973e+07 49.7334 0.00713288 0.995496 0 50.4166 GTEX-1JN1M-0004-SM-DE1NF B1 Blood Whole Blood 0013756 449 BP-61039 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JN1M-0004-SM-DJWWG B1 Blood Whole Blood 0013756 449 BP-61039 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JN1M-0006-SM-DHXJE B1 8.2 Blood Whole Blood 0013756 449 BP-61040 RNA isolation_PAXgene Blood RNA (Manual) 02/27/2015 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991878 1.23078e+06 0.962531 0.992824 0.788118 20068 1 76 0.00243536 204 0 1.05153e+08 0.0367863 427285 1.05913e+08 5.9057e+06 20085 5.23598e+07 0 0.174413 0.992824 0.782462 1.05153e+08 0.00275735 2.35913e+07 7.89608e+07 2.38498e+07 229 2.3864e+07 2.3969e+07 0.0025962 2.36982e+07 49.8257 0.00403429 0.993769 0 50.2724 GTEX-1JN1M-0011-R9a-SM-EZ6MR B1, A1 5.8 Brain Brain - Spinal cord (cervical c-1) 0006469 519 BP-79856 RNA isolation_PAXgene Tissue miRNA 10/26/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987183 390782 0.95937 0.988907 0.82587 24838 1 76 0.00251633 295 0 1.08733e+08 0.0403353 4.92978e+06 1.09952e+08 8.62979e+06 24869 5.41707e+07 0 0.1335 0.988907 0.816709 1.08733e+08 0.00341119 2.38718e+07 1.31319e+07 2.43153e+07 325 2.41224e+07 1.36033e+07 0.00296298 2.42311e+07 50.1125 0.0448356 0.990631 0 50.4602 GTEX-1JN1M-0126-SM-D4P23 0 B1 2 pieces, fascia/vascular elements are ~10% of tissue, rep delineated; focal fat necrosis, encircled 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 561 698 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994083 224149 0.979795 0.99528 0.789814 24040 1 76 0.00242122 276 0 1.06342e+08 0.0199295 820481 1.06847e+08 1.21334e+07 24078 5.30078e+07 0 0.189981 0.99528 0.786086 1.06342e+08 0.00342756 2.35171e+07 9.45857e+06 2.374e+07 322 2.3724e+07 1.84643e+07 0.00292378 2.3656e+07 49.9282 0.00767905 0.996478 0 50.2358 GTEX-1JN1M-0226-SM-D4P2U 0 B1 2 pieces, focal adherent fat up to ~0.6mm 6.8 Nerve Nerve - Tibial 0001323 567 692 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991888 261927 0.967783 0.993314 0.717616 24681 1 76 0.00261944 212 0 9.59696e+07 0.0320209 557962 9.66156e+07 1.29143e+07 24735 4.78108e+07 0 0.250168 0.993314 0.712817 9.59696e+07 0.00364626 2.10036e+07 9.55396e+06 2.12743e+07 224 2.12195e+07 1.29814e+07 0.00313211 2.11848e+07 49.959 0.00577507 0.994739 0 50.3201 GTEX-1JN1M-0326-SM-CYPT3 0 B1 6 pieces, no dermal fat; squamous epithelium is ~25 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 581 678 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994624 180507 0.978527 0.99527 0.766652 21882 1 76 0.00229185 149 0 6.94715e+07 0.021283 601297 6.98017e+07 5.12887e+06 21910 3.46391e+07 0 0.211874 0.99527 0.763026 6.94715e+07 0.00275617 1.54872e+07 6.81004e+06 1.55694e+07 164 1.5526e+07 1.0714e+07 0.00252386 1.55776e+07 50.0829 0.00861436 0.995915 0 50.1323 GTEX-1JN1M-0426-SM-CY8IN 0 B1 2 pieces, no significant atherosis or adherent fat 7.2 Blood Vessel Artery - Tibial 0007610 583 676 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989881 313141 0.9748 0.991803 0.795105 21890 1 76 0.00458532 151 0 7.83361e+07 0.0249468 395078 7.89835e+07 9.19053e+06 21915 3.89648e+07 0 0.179695 0.991803 0.788588 7.83361e+07 0.00730315 1.70251e+07 5.83807e+06 1.7148e+07 170 1.71339e+07 1.33691e+07 0.0059416 1.71857e+07 50.0755 0.00500203 0.993725 0 50.1797 GTEX-1JN1M-0526-SM-CJI3D 0 B1 2 pieces, ~10% interstitial fat/vascular elements 6.9 Muscle Muscle - Skeletal 0011907 584 675 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.99327 776091 0.979657 0.994408 0.843087 21150 1 76 0.00174581 285 0 9.47504e+07 0.0201216 913942 9.52831e+07 5.72164e+06 21168 4.72133e+07 0 0.136569 0.994408 0.838373 9.47504e+07 0.00234148 2.06425e+07 9.34239e+06 2.09784e+07 271 2.10073e+07 1.8972e+07 0.0020433 2.07039e+07 49.6363 0.00959185 0.995546 0 50.4035 GTEX-1JN1M-0926-SM-D4P2V 1 B1 2 pieces, calcifying atherosis, ~60% occlusive, delineated; partial rims adherent epicardial fat up to ~1mm 6.6 Blood Vessel Artery - Coronary 0001621 615 644 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992123 273672 0.970985 0.993529 0.728587 23795 1 76 0.00278848 159 0 8.59123e+07 0.0286921 276510 8.64719e+07 1.11372e+07 23841 4.27645e+07 0 0.242397 0.993529 0.723872 8.59123e+07 0.003789 1.8607e+07 6.95262e+06 1.8751e+07 180 1.87274e+07 1.33297e+07 0.00328803 1.87472e+07 50.0265 0.00319769 0.994934 0 50.1928 GTEX-1JN1M-1026-SM-CNPOS 1 B1 2 pieces, marked interstitial fibrosis/chronic ischemic changes 5.7 Heart Heart - Left Ventricle 0006566 622 637 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984908 162822 0.983697 0.988295 0.842842 21662 1 76 0.00572059 263 0 8.21863e+07 0.0162226 6.07853e+06 8.31597e+07 2.28225e+07 21678 4.08623e+07 0 0.140855 0.988295 0.832976 8.21863e+07 0.00855172 1.76852e+07 2.18032e+07 1.88652e+07 279 1.88172e+07 5.27169e+06 0.0071313 1.7922e+07 48.7817 0.0730947 0.991681 0 51.6141 GTEX-1JN1M-1826-SM-ARU92 1 B1 6 pieces, confirmed target muscularis 6.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 668 591 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 EXCLUDE 0.99092 336271 0.965148 0.992231 0.702736 25198 1 76 0.00239379 139 0 6.47524e+07 0.0345888 549140 6.52594e+07 2.37798e+06 25229 3.22384e+07 0 0.262412 0.992231 0.697277 6.47524e+07 0.00321822 1.42539e+07 7.32927e+06 1.42976e+07 137 1.43397e+07 9.79456e+06 0.00280546 1.42949e+07 49.9217 0.00841473 0.993542 0 50.0765 GTEX-1JN1M-2026-SM-D4P2W 1 B1 6 pieces, confirmed target muscularis 6.3 Esophagus Esophagus - Muscularis 0004648 682 577 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991732 297164 0.968885 0.993423 0.757739 24397 1 76 0.00256952 269 0 9.91739e+07 0.0309089 862904 9.98305e+07 1.26791e+07 24443 4.93765e+07 0 0.211146 0.993423 0.752755 9.91739e+07 0.00421135 2.14366e+07 8.96463e+06 2.16302e+07 257 2.1594e+07 1.42155e+07 0.00338903 2.16341e+07 50.0464 0.00864369 0.995114 0 50.2247 GTEX-1JN1M-2126-SM-D4P2X 1 B1 2 pieces, post menopausal atrophy 6 Ovary Ovary 0000992 687 572 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991323 336992 0.960303 0.992771 0.717432 25646 1 76 0.002705 204 0 9.56353e+07 0.0394999 952817 9.63317e+07 1.24613e+07 25700 4.76202e+07 0 0.242872 0.992771 0.712245 9.56353e+07 0.00366297 2.07859e+07 1.18146e+07 2.09951e+07 214 2.09475e+07 1.39463e+07 0.00318329 2.09717e+07 50.0288 0.009891 0.994219 0 50.2503 GTEX-1JN1M-2326-SM-ARZNG 2 B1 6 pieces, squamous mucosa is sloughing, where residual, ~38 microns 6.5 Vagina Vagina 0000996 695 564 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987281 386504 0.960081 0.989114 0.646757 24669 1 76 0.00277108 119 0 6.22597e+07 0.0395712 153824 6.29449e+07 3.02007e+06 24724 3.08904e+07 0 0.313324 0.989114 0.639716 6.22597e+07 0.00405429 1.34256e+07 6.08847e+06 1.37513e+07 119 1.38837e+07 8.81928e+06 0.0034115 1.34003e+07 49.1142 0.00244379 0.990948 0 50.5992 GTEX-1JN1M-2426-SM-ARU93 1 B1 2 pieces, ~50% glandular elements (delineated), rest is fat/connetive tissue 8.1 Salivary Gland Minor Salivary Gland 0006330 701 558 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.992438 461012 0.969349 0.993644 0.762441 25483 1 76 0.00229515 282 0 9.40098e+07 0.029943 631182 9.46112e+07 3.17625e+06 25520 4.68177e+07 0 0.206908 0.993644 0.757595 9.40098e+07 0.00283094 2.09352e+07 1.27214e+07 2.10649e+07 259 2.11385e+07 1.56182e+07 0.00256272 2.09642e+07 49.7931 0.00667133 0.99485 0 50.1544 GTEX-1JN1M-2626-SM-CY8I3 3 B1 6 pieces, mucosa with advanced autolysis, largely sloughed 6.6 Colon Colon - Transverse 0001157 714 545 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989138 259970 0.973084 0.991415 0.763956 23560 1 76 0.00450679 133 0 6.43372e+07 0.0266934 539930 6.48943e+07 7.27882e+06 23584 3.19951e+07 0 0.209128 0.991415 0.757398 6.43372e+07 0.00778288 1.40879e+07 7.30272e+06 1.41474e+07 137 1.41614e+07 1.0339e+07 0.00614107 1.4217e+07 50.0981 0.00832014 0.993693 0 50.1054 GTEX-1JN1M-2726-SM-CY8I4 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~25 microns 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 711 548 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990825 313855 0.975036 0.992649 0.781849 24711 1 76 0.00443379 189 0 9.62727e+07 0.024707 666453 9.69857e+07 1.04178e+07 24752 4.7932e+07 0 0.193187 0.992649 0.776101 9.62727e+07 0.00738875 2.11543e+07 1.09579e+07 2.12913e+07 198 2.13331e+07 1.78559e+07 0.00590856 2.12807e+07 49.9386 0.00687167 0.994472 0 50.1614 GTEX-1JN1M-2926-SM-CNNPJ 3 B1 6 pieces, mucosa up to ~0.8mm but with advanced autolysis 5.8 Stomach Stomach 0000945 720 539 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.987549 222539 0.974189 0.98983 0.798902 24290 1 76 0.00247172 274 0 7.82914e+07 0.0253913 2.12457e+06 7.90958e+07 9.26929e+06 24316 3.89536e+07 0 0.175287 0.98983 0.790776 7.82914e+07 0.00373819 1.77139e+07 5.12287e+07 1.78752e+07 221 1.7921e+07 1.49025e+07 0.0031035 1.78457e+07 49.8947 0.0268607 0.99211 0 50.2265 GTEX-1JN1M-3026-SM-CMKGK 1 B1 2 pieces, fibroadipose elements only 6.4 Breast Breast - Mammary Tissue 0008367 725 534 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.994815 314054 0.978134 0.995708 0.789415 23468 1 76 0.00209158 273 0 9.90245e+07 0.0215798 500617 9.94513e+07 7.5507e+06 23498 4.93654e+07 0 0.188719 0.995708 0.786027 9.90245e+07 0.00268221 2.19024e+07 8.0166e+06 2.20162e+07 258 2.20278e+07 1.8215e+07 0.00238663 2.19795e+07 49.945 0.00503379 0.996601 0 50.1295 GTEX-1JN1M-3126-SM-AHZ4E 1 B1 4 pieces, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 790 469 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132,LCSET-8323 01/06/2016 TruSeq.v1 RNASEQ 0.988738 429763 0.941505 0.990392 0.705187 23126 1 76 0.00545724 114 0 6.35381e+07 0.0581558 1.93164e+06 6.41545e+07 8.30956e+06 23150 3.16042e+07 0 0.236318 0.990392 0.698412 6.35381e+07 0.00679522 1.36498e+07 1.581e+07 1.38429e+07 131 1.38558e+07 7.17772e+06 0.00612511 1.37302e+07 49.7723 0.0301092 0.992046 0 50.3512 GTEX-1JN1M-3326-SM-CXZJX 1 B1 1 piec, adenohypophysis only 7.2 Pituitary Pituitary 0000007 791 468 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993556 402884 0.953173 0.994775 0.716587 26241 1 76 0.00205591 196 0 9.37636e+07 0.0466533 716219 9.42561e+07 5.77071e+06 26294 4.67255e+07 0 0.236586 0.994775 0.712843 9.37636e+07 0.00275443 1.97913e+07 1.32855e+07 2.00673e+07 215 2.00532e+07 1.30098e+07 0.00240474 1.99175e+07 49.8302 0.00759865 0.995994 0 50.3462 GTEX-1JN6P-0001-SM-DE1N7 B1 Blood Whole Blood 0013756 745 BP-61118 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JN6P-0001-SM-DJWYE B1 Blood Whole Blood 0013756 745 BP-61118 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JN6P-0005-SM-DIPEH B1 8.9 Blood Whole Blood 0013756 745 BP-61120 RNA isolation_PAXgene Blood RNA (Manual) 03/02/2015 LCSET-10311,LCSET-10533 01/26/2017 TruSeq.v1 RNASEQ 0.990691 914376 0.959493 0.992274 0.614054 20602 1 76 0.00297344 112 0 7.58384e+07 0.0400786 223674 7.64289e+07 6.00391e+06 20642 3.77264e+07 0 0.34544 0.992274 0.609309 7.58384e+07 0.00411664 1.68697e+07 3.02486e+07 1.68885e+07 126 1.69714e+07 1.05687e+07 0.00354413 1.69208e+07 49.9254 0.00292656 0.993857 0 50.0278 GTEX-1JN6P-0011-R4a-SM-EZ6MS B1, A1 5.8 Brain Brain - Amygdala 0001876 885 BP-79856 RNA isolation_PAXgene Tissue miRNA 10/26/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986264 390938 0.969662 0.987815 0.85827 21538 1 76 0.0026205 268 0 9.62971e+07 0.0302347 1.46667e+07 9.74849e+07 6.45101e+06 21552 4.79984e+07 0 0.111392 0.987815 0.847813 9.62971e+07 0.00371774 2.11263e+07 2.92637e+07 2.16575e+07 329 2.12524e+07 5.1251e+06 0.00316826 2.1623e+07 50.4322 0.150451 0.989366 0 50.6209 GTEX-1JN6P-0126-SM-D3L98 1 B1 6 pieces; well trimmed; up to 20% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 869 1006 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991019 397299 0.973939 0.993261 0.794338 23647 1 76 0.00266118 228 0 9.08546e+07 0.0257559 425948 9.14711e+07 9.01091e+06 23675 4.52188e+07 0 0.179601 0.993261 0.788985 9.08546e+07 0.00389627 1.98996e+07 1.04888e+07 2.00848e+07 213 2.01117e+07 1.59151e+07 0.00327733 2.00652e+07 49.9422 0.00465664 0.995502 0 50.2316 GTEX-1JN6P-0226-SM-COH34 1 B1 2 pieces; 10% & 20% fibrous content 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 883 992 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991047 232209 0.976867 0.992421 0.789606 22801 1 76 0.00375438 156 0 7.32482e+07 0.0227994 445355 7.38075e+07 8.12083e+06 22832 3.64667e+07 0 0.187261 0.992421 0.783621 7.32482e+07 0.00447055 1.6064e+07 7.29599e+06 1.61808e+07 167 1.61719e+07 1.21838e+07 0.00411197 1.61741e+07 50.0034 0.006034 0.993796 0 50.1812 GTEX-1JN6P-0326-SM-CNPPB 1 B1 2 pieces; 10% external fat content 7.5 Nerve Nerve - Tibial 0001323 885 990 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412,LCSET-9786 09/04/2016 TruSeq.v1 RNASEQ 0.987348 987344 0.964027 0.98974 0.736068 28160 1 76 0.00321754 532 0 2.04606e+08 0.035675 700123 2.06727e+08 1.90326e+07 28248 1.01689e+08 0 0.227959 0.98974 0.728516 2.04606e+08 0.00457785 4.48195e+07 2.05406e+07 4.49258e+07 443 4.51407e+07 2.94671e+07 0.00389605 4.50594e+07 49.955 0.00338671 0.992132 0 50.0592 GTEX-1JN6P-0426-SM-D3L99 1 B1 2 pieces; 10% external fat content 7.4 Blood Vessel Artery - Tibial 0007610 886 989 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990544 372855 0.972793 0.992871 0.811231 22564 1 76 0.0026216 216 0 9.26162e+07 0.026812 364535 9.32812e+07 1.00607e+07 22594 4.60768e+07 0 0.161561 0.992871 0.805448 9.26162e+07 0.00362313 1.97225e+07 8.93424e+06 1.9939e+07 223 1.995e+07 1.74023e+07 0.0031212 1.99145e+07 49.9554 0.00390792 0.995197 0 50.2729 GTEX-1JN6P-0526-SM-COH33 1 B1 2 pieces; 5% fat content 8.8 Muscle Muscle - Skeletal 0011907 887 988 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993351 368765 0.984044 0.994705 0.882283 20167 1 76 0.00323846 201 0 9.70426e+07 0.0156846 680362 9.75591e+07 1.01142e+07 20181 4.83705e+07 0 0.101761 0.994705 0.877611 9.70426e+07 0.00424089 2.07888e+07 9.74164e+06 2.09549e+07 248 2.09963e+07 2.14031e+07 0.00373899 2.08644e+07 49.8425 0.00697384 0.996059 0 50.1989 GTEX-1JN6P-0626-SM-ARZN6 2 B1 2 pieces; slight focal lymphoid deposits c/w lymphocytic thyroiditis 7 Thyroid Thyroid 0002046 951 924 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.987789 482230 0.968185 0.989748 0.761485 23922 1 76 0.00274464 125 0 6.39055e+07 0.0311674 238344 6.45674e+07 2.93586e+06 23949 3.17165e+07 0 0.2067 0.989748 0.753678 6.39055e+07 0.00378223 1.39468e+07 6.70129e+06 1.41382e+07 136 1.4285e+07 1.0896e+07 0.00326241 1.39182e+07 49.3497 0.0036914 0.991707 0 50.3408 GTEX-1JN6P-0726-SM-ARZN7 1 B1 2 pieces; edema, congestion, intra-alveolar macrophages 6.7 Lung Lung 0008952 957 918 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.986164 423920 0.969237 0.98795 0.723408 23917 1 76 0.00276105 126 0 6.58418e+07 0.030441 423909 6.66449e+07 3.07648e+06 23951 3.26728e+07 0 0.245829 0.98795 0.714691 6.58418e+07 0.00403521 1.44214e+07 7.99053e+06 1.46297e+07 141 1.48129e+07 9.25079e+06 0.00339698 1.4348e+07 49.2029 0.00636071 0.989737 0 50.3585 GTEX-1JN6P-0826-SM-ARL97 1 B1 2 pieces; low fat & fibrous content 6.9 Heart Heart - Atrial Appendage 0006631 959 916 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.989853 855469 0.973638 0.990154 0.723122 21690 1 76 0.00207035 106 0 5.30107e+07 0.0261147 1.02753e+06 5.35378e+07 4.86106e+06 21710 2.62918e+07 0 0.250515 0.990154 0.716003 5.30107e+07 0.00265008 1.17022e+07 7.41359e+06 1.16068e+07 122 1.19908e+07 6.85121e+06 0.00236013 1.13343e+07 48.5927 0.0191925 0.990455 0 49.7952 GTEX-1JN6P-1126-SM-CKZON 1 B1 2 pieces; scattered enlarged nuclei; minimal fat content 5.7 Heart Heart - Left Ventricle 0006566 975 900 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991293 115363 0.9907 0.993898 0.865236 16819 1 76 0.0021681 364 0 8.88912e+07 0.0092752 7.80137e+06 8.9437e+07 8.30656e+06 16820 4.42689e+07 0 0.125464 0.993898 0.859956 8.88912e+07 0.00395804 1.92408e+07 3.79235e+07 2.01898e+07 387 1.98413e+07 2.09319e+06 0.00306072 1.97104e+07 49.8345 0.0872275 0.996503 0 51.2034 GTEX-1JN6P-1626-SM-CYPSV 1 B1 2 pieces; 10% fibrous content in 1 piece 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 999 876 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770,LCSET-9874 09/29/2016 TruSeq.v1 RNASEQ 0.992368 297421 0.976672 0.993225 0.772756 23840 1 76 0.00235471 213 0 9.34799e+07 0.0229462 529846 9.41175e+07 5.67729e+06 23872 4.65074e+07 0 0.203916 0.993225 0.767521 9.34799e+07 0.00285995 2.06899e+07 9.89789e+06 2.07465e+07 230 2.08746e+07 1.52791e+07 0.00260711 2.06446e+07 49.7231 0.00562962 0.994083 0 50.0683 GTEX-1JN6P-2126-SM-ARL98 2 B1 6 pieces; well dissected muscularis, but not well preserved 5.9 Colon Colon - Sigmoid 0001159 1040 835 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8790 03/22/2016 TruSeq.v1 RNASEQ 0.984361 480018 0.95784 0.986049 0.801405 21579 1 76 0.00326099 153 0 6.72497e+07 0.0419305 1.45040e+06 6.82012e+07 9.90951e+06 21603 3.33917e+07 0 0.156434 0.986049 0.790225 6.72497e+07 0.0044437 1.42888e+07 1.4802e+07 1.44975e+07 177 1.46888e+07 7.11199e+06 0.00385133 1.42095e+07 49.1707 0.0212666 0.987736 0 50.3626 GTEX-1JN6P-2426-SM-ARL99 2 B1 2 pieces; mammary ducts, moderately autolyzed, in fibroadipose tissue in 1 piece; no ducts in other piece 6.2 Breast Breast - Mammary Tissue 0008367 1041 834 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8137,LCSET-8789 03/09/2016 TruSeq.v1 RNASEQ 0.989391 469059 0.973798 0.989453 0.750148 21739 1 76 0.00224669 125 0 5.90731e+07 0.0258306 465497 5.97028e+07 4.75411e+06 21772 2.93503e+07 0 0.22365 0.989453 0.742236 5.90731e+07 0.00269523 1.2966e+07 7.59849e+06 1.30584e+07 136 1.32955e+07 8.70237e+06 0.00247095 1.27365e+07 48.9263 0.0077969 0.989514 0 50.1776 GTEX-1JN6P-2526-SM-CNNPX 1 B1 2 pieces; 1 piece is all salivary gland; other is 50% gland with remainder fibroadipose and muscle tissue 7.8 Salivary Gland Minor Salivary Gland 0006330 1044 831 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.987718 326129 0.967786 0.989588 0.756221 26490 1 76 0.00308109 282 0 1.17965e+08 0.0301207 367242 1.19206e+08 1.35324e+07 26540 5.86025e+07 0 0.211565 0.989588 0.748347 1.17965e+08 0.00393978 2.61872e+07 1.71133e+07 2.64457e+07 313 2.65513e+07 1.84317e+07 0.00350962 2.62855e+07 49.7484 0.00308074 0.991458 0 50.2456 GTEX-1JN6P-2526-SM-E9IK1 1 B1 2 pieces; 1 piece is all salivary gland; other is 50% gland with remainder fibroadipose and muscle tissue Salivary Gland Minor Salivary Gland 0006330 1044 831 BP-73232 DNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-10755 04/03/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-1JN6P-2626-SM-D4P3C 2 B1 2 pieces; glandular epithelium severely autolyzed, stroma intact 6.3 Prostate Prostate 0002367 1050 825 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991962 178230 0.966205 0.993327 0.784192 24642 1 76 0.00273366 163 0 8.02007e+07 0.0335296 1.33484e+06 8.07394e+07 1.02679e+07 24673 3.99334e+07 0 0.182013 0.993327 0.778959 8.02007e+07 0.00369121 1.75695e+07 8.37181e+06 1.79328e+07 201 1.78821e+07 1.10829e+07 0.00321177 1.77282e+07 49.7839 0.0165326 0.994693 0 50.5117 GTEX-1JN6P-2826-SM-CXZJK 2 B1 2 pieces; active spermatogenesis 6.2 Testis Testis 0000473 1052 823 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990929 462394 0.916351 0.992397 0.688867 35449 1 76 0.0020107 289 0 1.29288e+08 0.0833179 1.15438e+06 1.30278e+08 7.84297e+06 35549 6.44214e+07 0 0.227484 0.992397 0.683629 1.29288e+08 0.00296212 2.64309e+07 1.91855e+07 2.67332e+07 324 2.67885e+07 1.97112e+07 0.00248571 2.65334e+07 49.7609 0.0088609 0.993865 0 50.2843 GTEX-1JN6P-2926-SM-CL54D 1 B1 6 pieces; hair-bearing skin with up to 6 hair follicles per piece; up to 40% dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1054 821 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.98938 569489 0.968553 0.991631 0.690256 26172 1 76 0.00280899 274 0 1.1342e+08 0.0312449 995141 1.14378e+08 1.51517e+07 26245 5.64027e+07 0 0.278297 0.991631 0.68448 1.1342e+08 0.00473596 2.50366e+07 1.51294e+07 2.52782e+07 268 2.53413e+07 1.40218e+07 0.00377029 2.52226e+07 49.8826 0.00870049 0.993883 0 50.2401 GTEX-1JN6P-3226-SM-D4P3D 1 B1 1 piece; neural tissue comprises <5% 7 Pituitary Pituitary 0000007 1136 739 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993507 418949 0.958742 0.994652 0.770927 25820 1 76 0.00250985 273 0 1.11209e+08 0.0409846 1.07535e+06 1.11807e+08 1.34148e+07 25870 5.54201e+07 0 0.187814 0.994652 0.766804 1.11209e+08 0.00349575 2.40824e+07 2.02059e+07 2.45702e+07 329 2.45487e+07 1.52847e+07 0.00300223 2.42285e+07 49.6717 0.00961791 0.995796 0 50.5013 GTEX-1JN76-0004-SM-DE1KU B1 Blood Whole Blood 0013756 -10 BP-61118 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1JN76-0004-SM-DJWYP B1 Blood Whole Blood 0013756 -10 BP-61118 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1JN76-0005-SM-EAZ3B B1 8.4 Blood Whole Blood 0013756 -10 BP-61398 RNA isolation_PAXgene Blood RNA (Manual) 03/06/2015 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990583 819904 0.963382 0.991262 0.836578 19135 1 76 0.00214656 208 0 9.78442e+07 0.0362541 852425 9.87067e+07 7.16509e+06 19143 4.87602e+07 0 0.126804 0.991262 0.829269 9.78442e+07 0.00290767 2.16812e+07 5.43326e+07 2.18336e+07 220 2.17917e+07 2.18491e+07 0.00252685 2.18067e+07 50.0173 0.00863594 0.991942 0 50.1751 GTEX-1JN76-0126-SM-CNPPE 0 B1 6 pieces; well trimmed with 5 - 20% dermal fat 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 123 468 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983015 301005 0.971243 0.986155 0.796087 23706 1 76 0.00588981 179 0 7.39532e+07 0.0285458 552500 7.49915e+07 2.05445e+07 23729 3.67574e+07 0 0.175156 0.986155 0.785066 7.39532e+07 0.00830847 1.62063e+07 9.74843e+06 1.6301e+07 153 1.63689e+07 1.26243e+07 0.00709529 1.63615e+07 49.9887 0.0073675 0.989296 0 50.1457 GTEX-1JN76-0226-SM-CMKGO 0 B1 2 pieces; <5% fibrous content 8.4 Adipose Tissue Adipose - Subcutaneous 0002190 125 466 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993708 451456 0.964762 0.994908 0.806677 21862 1 76 0.00194151 146 0 6.42425e+07 0.0349905 315377 6.45713e+07 4.75028e+06 21885 3.202e+07 0 0.158085 0.994908 0.802569 6.42425e+07 0.00291243 1.40187e+07 1.2292e+07 1.41474e+07 154 1.41511e+07 1.13171e+07 0.00242638 1.41025e+07 49.914 0.00488417 0.996109 0 50.2285 GTEX-1JN76-0326-SM-ARZNJ 0 B1 2 pieces; <5% fat content 8.6 Muscle Muscle - Skeletal 0011907 128 463 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.988157 1.14088e+06 0.982164 0.990764 0.866928 18924 1 76 0.00199925 198 0 8.40289e+07 0.0176285 931753 8.48122e+07 3.04934e+06 18928 4.16829e+07 0 0.115237 0.990764 0.858921 8.40289e+07 0.00331032 1.79496e+07 1.79778e+07 1.85892e+07 208 1.88701e+07 1.72249e+07 0.00265306 1.78412e+07 48.5986 0.0109861 0.99337 0 50.8754 GTEX-1JN76-0426-SM-ARZNK 1 B1 2 pieces; thin band of external fat around 1 piece [0.2mm thick] 7.5 Nerve Nerve - Tibial 0001323 133 458 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.989744 445664 0.968387 0.991462 0.779097 22988 1 76 0.00228434 148 0 6.28868e+07 0.031327 246641 6.34284e+07 2.84203e+06 23018 3.12412e+07 0 0.189291 0.991462 0.772445 6.28868e+07 0.00349959 1.36583e+07 6.21720e+06 1.40523e+07 142 1.4203e+07 1.10469e+07 0.00289091 1.36049e+07 48.9245 0.00388849 0.993179 0 50.7109 GTEX-1JN76-0526-SM-CM2SH 0 B1 2 pieces; well dissected, lesion free 8.8 Blood Vessel Artery - Tibial 0007610 134 457 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993369 404750 0.975048 0.994834 0.844066 21496 1 76 0.00182485 276 0 9.75914e+07 0.024598 482433 9.80982e+07 6.28778e+06 21519 4.85975e+07 0 0.130983 0.994834 0.839705 9.75914e+07 0.00256427 2.10833e+07 6.89578e+06 2.11762e+07 280 2.1203e+07 1.91611e+07 0.00219402 2.11957e+07 49.9913 0.00491786 0.996299 0 50.1099 GTEX-1JN76-0626-SM-CKZOQ 1 B1 6 pieces; well dissected; dermal fat <5% 8.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 137 454 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991607 420652 0.970254 0.99373 0.805303 23852 1 76 0.0018605 213 0 8.69804e+07 0.0295442 539681 8.75292e+07 7.62723e+06 23881 4.33169e+07 0 0.164951 0.99373 0.800254 8.69804e+07 0.00327469 1.91181e+07 1.05608e+07 1.92518e+07 208 1.93131e+07 1.62686e+07 0.00256608 1.9235e+07 49.8987 0.00616573 0.995853 0 50.1742 GTEX-1JN76-0826-SM-C1YRK 1 B1 2 pieces; atelectatic (?procedural); 1.5mm2 fibrovascular focus at one edge 8.7 Lung Lung 0008952 144 447 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.989053 611861 0.976562 0.991777 0.810046 23407 1 76 0.00183981 161 0 7.33971e+07 0.0231229 307836 7.40056e+07 3.26673e+06 23432 3.6491e+07 0 0.166516 0.991777 0.803386 7.33971e+07 0.00241515 1.64766e+07 6.24272e+06 1.63089e+07 174 1.6366e+07 1.36959e+07 0.00212669 1.66026e+07 50.3589 0.00415963 0.994502 0 49.7442 GTEX-1JN76-0926-SM-ARZNH 1 B1 6 pieces; 3 full thickness, 1 mucosa only, 1 mostly muscle, 1 all muscle; mucosa, where present, very well preserved 9.1 Stomach Stomach 0000945 149 442 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.990886 682711 0.975265 0.9929 0.829236 22038 1 76 0.00214233 151 0 6.8272e+07 0.0243376 246923 6.87602e+07 2.86432e+06 22056 3.39136e+07 0 0.146029 0.9929 0.823348 6.8272e+07 0.00332908 1.47667e+07 5.59164e+06 1.49104e+07 152 1.50783e+07 1.39168e+07 0.0027345 1.47229e+07 49.4038 0.00359107 0.994913 0 50.2421 GTEX-1JN76-1026-SM-ARZNI 0 B1 2 pieces; 1 with 10% fibrous content, other with <5% 8.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 153 438 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8136 01/23/2016 TruSeq.v1 RNASEQ 0.990376 824980 0.976625 0.992422 0.821302 22297 1 76 0.00220426 144 0 7.12616e+07 0.0231024 195216 7.18058e+07 2.8187e+06 22321 3.54031e+07 0 0.155323 0.992422 0.815079 7.12616e+07 0.00329469 1.56832e+07 6.28845e+06 1.58659e+07 159 1.60695e+07 1.42494e+07 0.00274835 1.56108e+07 49.2761 0.00271867 0.994468 0 50.2896 GTEX-1JN76-1126-SM-C1YRL 1 B1 5 pieces; well preserved lymphoid nodules; abundant well preserved mucosa; LCM 8 Small Intestine Small Intestine - Terminal Ileum 0001211 157 434 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105,LCSET-9327 06/16/2016 TruSeq.v1 RNASEQ 0.989319 686474 0.966164 0.991347 0.7554 27247 1 76 0.00257759 288 0 1.45843e+08 0.033377 577373 1.47115e+08 1.47827e+07 27312 7.26124e+07 0 0.210764 0.991347 0.748864 1.45843e+08 0.00341392 3.2169e+07 1.66268e+07 3.23336e+07 328 3.24255e+07 2.40358e+07 0.0029949 3.2355e+07 49.9456 0.00392462 0.993375 0 50.1277 GTEX-1JN76-1226-SM-C1YRM 1 B1 6 pieces; all full thickness; well preserved 8.4 Colon Colon - Transverse 0001157 163 428 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.990066 650892 0.974393 0.992731 0.812273 23879 1 76 0.00172052 283 0 1.05692e+08 0.0249951 1.10163e+06 1.06465e+08 4.65217e+06 23916 5.25719e+07 0 0.16212 0.992731 0.806369 1.05692e+08 0.00214632 2.35258e+07 1.26564e+07 2.37412e+07 327 2.37786e+07 1.79056e+07 0.00193285 2.37365e+07 49.9557 0.0103473 0.995396 0 50.2279 GTEX-1JN76-1326-SM-ARU94 1 B1 6 pieces; muscularis with varying amounts of fibrous and fatty tissue up to 30% 8.7 Colon Colon - Sigmoid 0001159 169 422 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8135 01/23/2016 TruSeq.v1 RNASEQ 0.993537 331807 0.975235 0.994632 0.833147 22509 1 76 0.00181409 216 0 8.43542e+07 0.0244265 415071 8.48095e+07 2.85699e+06 22532 4.20449e+07 0 0.142089 0.994632 0.828674 8.43542e+07 0.00233922 1.81831e+07 6.4845e+06 1.83347e+07 241 1.83246e+07 1.5761e+07 0.00207637 1.82787e+07 49.9374 0.00489416 0.995726 0 50.2076 GTEX-1JN76-1426-SM-AHZ4F 1 B1 2 pieces; large corpus luteum occupies 70% of 1 piece and 30% of the other 8.5 Ovary Ovary 0000992 173 418 BP-67880 RNA Extraction from Paxgene-derived Lysate Plate Based 10/07/2015 LCSET-8132 11/22/2015 TruSeq.v1 RNASEQ 0.988846 469919 0.968731 0.990468 0.750648 24782 1 76 0.0065387 173 0 9.51923e+07 0.0309804 118721 9.61085e+07 1.65864e+07 24830 4.73711e+07 0 0.218083 0.990468 0.743493 9.51923e+07 0.00828768 2.09706e+07 9.46318e+06 2.10857e+07 177 2.11178e+07 1.64532e+07 0.00741176 2.10849e+07 49.961 0.00123528 0.99209 0 50.1368 GTEX-1JN76-1526-SM-CNPPF 1 B1 6 pieces; foci of chronic inflammation 9.5 Vagina Vagina 0000996 177 414 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984773 365055 0.978539 0.987407 0.785113 24413 1 76 0.00548221 219 0 1.07019e+08 0.0211449 266663 1.08384e+08 2.62036e+07 24446 5.32388e+07 0 0.193426 0.987407 0.775226 1.07019e+08 0.00805358 2.41634e+07 1.70204e+07 2.42393e+07 242 2.43685e+07 2.00621e+07 0.00676447 2.4306e+07 49.9358 0.00246035 0.990041 0 50.0785 GTEX-1JN76-1626-SM-CNNQ3 0 B1 2 pieces; all myometrium 9.6 Uterus Uterus 0000995 179 412 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993171 185465 0.975971 0.995004 0.844046 21392 1 76 0.00205829 146 0 6.4579e+07 0.0236299 137330 6.49032e+07 6.76409e+06 21408 3.21679e+07 0 0.131925 0.995004 0.839829 6.4579e+07 0.00317397 1.41224e+07 4.52011e+06 1.42494e+07 147 1.42766e+07 1.333e+07 0.0026151 1.42042e+07 49.8729 0.00211592 0.996836 0 50.2239 GTEX-1K2DA-0002-SM-ANILQ B1 Blood Whole Blood 0013756 -57 BP-61441 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/09/2015 LCSET-8330 12/21/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1K2DA-0002-SM-AYROF B1 Blood Whole Blood 0013756 -57 BP-61441 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/09/2015 LCSET-8653 03/25/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1K2DA-0005-SM-DIPE7 B1 8.7 Blood Whole Blood 0013756 -57 BP-61440 RNA isolation_PAXgene Blood RNA (Manual) 03/09/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992899 923046 0.959041 0.994163 0.816778 19205 1 76 0.00273128 180 0 8.88907e+07 0.0403063 272007 8.94126e+07 6.68408e+06 19218 4.42725e+07 0 0.142264 0.994163 0.81201 8.88907e+07 0.00391901 1.92588e+07 2.63654e+07 1.93779e+07 193 1.94441e+07 1.81143e+07 0.00332439 1.93089e+07 49.8256 0.00304216 0.995428 0 50.1541 GTEX-1K2DA-0126-SM-CGQGV 0 B1 2 pieces; capsule is present on 1 piece, some congestion 7.5 Spleen Spleen 0002106 106 482 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991331 761223 0.964488 0.993265 0.770018 27164 1 76 0.00396674 522 0 1.72365e+08 0.034843 1.12670e+06 1.73533e+08 1.27885e+07 27239 8.57833e+07 0 0.19447 0.993265 0.764832 1.72365e+08 0.0042304 3.78309e+07 2.10857e+07 3.80347e+07 450 3.80561e+07 2.41655e+07 0.00409129 3.80784e+07 50.0147 0.00649273 0.995198 0 50.1343 GTEX-1K2DA-0226-SM-CGQGW 1 B1 2 pieces; both include small attachment of fat, predominantly cortex with small portion of medulla in 1 piece 7.3 Adrenal Gland Adrenal Gland 0002369 113 475 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990722 1.09114e+06 0.971549 0.992939 0.807575 25591 1 76 0.00351581 520 0 1.7405e+08 0.0282021 3.60099e+06 1.75287e+08 1.26257e+07 25659 8.66642e+07 0 0.163974 0.992939 0.801873 1.7405e+08 0.00375693 3.82975e+07 2.53489e+07 3.85156e+07 471 3.86346e+07 2.3144e+07 0.00362965 3.84707e+07 49.8938 0.0205433 0.995156 0 50.142 GTEX-1K2DA-0326-SM-CGQGX 1 B1 2 pieces; includes up to 10% attached and internal fat, islets well visualized, mild intralobular fibrosis, focal PanIN-1B 7.1 Pancreas Pancreas 0001150 122 466 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992643 1.14456e+06 0.973843 0.994711 0.814639 25241 1 76 0.00378071 374 0 1.88026e+08 0.0258802 460621 1.89026e+08 1.29661e+07 25292 9.36365e+07 0 0.159204 0.994711 0.81033 1.88026e+08 0.00380727 4.28553e+07 4.69032e+07 4.32801e+07 384 4.33551e+07 4.70856e+07 0.00379325 4.31437e+07 49.8778 0.00243682 0.99678 0 50.2466 GTEX-1K2DA-0526-SM-CGQGY 0 B1 6 pieces; target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 133 455 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993127 480292 0.971906 0.994789 0.817322 23972 1 76 0.00358788 277 0 1.0022e+08 0.0278494 476090 1.00745e+08 6.89438e+06 24004 4.99305e+07 0 0.154584 0.994789 0.813063 1.0022e+08 0.00350221 2.19081e+07 9.59958e+06 2.2064e+07 258 2.20334e+07 1.65106e+07 0.00354741 2.20694e+07 50.0408 0.00472571 0.996452 0 50.1773 GTEX-1K2DA-0626-SM-CGQGO 0 B1 6 pieces; parakeratosis with focal superficial exudate with possible fungal organisms; squamous hyperplasia (possible reflux) 9.8 Esophagus Esophagus - Mucosa 0006920 142 446 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991493 1.24346e+06 0.976178 0.993469 0.829475 24652 1 76 0.00343312 533 0 2.06501e+08 0.0234045 991750 2.07859e+08 1.28254e+07 24694 1.0286e+08 0 0.146704 0.993469 0.824057 2.06501e+08 0.00371418 4.65525e+07 3.41227e+07 4.67358e+07 422 4.68233e+07 3.95752e+07 0.00356573 4.67991e+07 49.9871 0.00477127 0.995446 0 50.0982 GTEX-1K2DA-0726-SM-CGQGC 0 B1 6 pieces; target muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 143 445 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992269 654604 0.975152 0.994267 0.832932 25476 1 76 0.00339025 518 0 1.68155e+08 0.0245582 773876 1.69125e+08 1.1278e+07 25514 8.37664e+07 0 0.142221 0.994267 0.828157 1.68155e+08 0.00386742 3.66651e+07 1.35582e+07 3.69384e+07 431 3.68981e+07 2.91688e+07 0.00361553 3.69636e+07 50.0444 0.00457576 0.996265 0 50.1856 GTEX-1K2DA-0826-SM-CGQGD 1 B1 6 pieces; variable representation of mucosa, submucosa, muscularis; multiple erosions, dilated deep glands 8.2 Stomach Stomach 0000945 149 439 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991372 1.17206e+06 0.974305 0.993434 0.824404 25702 1 76 0.00336501 532 0 1.91892e+08 0.0254216 972296 1.9316e+08 1.25092e+07 25749 9.55793e+07 0 0.149901 0.993434 0.81899 1.91892e+08 0.00373863 4.16448e+07 1.65026e+07 4.2046e+07 437 4.19812e+07 3.26434e+07 0.00354133 4.20162e+07 50.0209 0.00503362 0.995495 0 50.2397 GTEX-1K2DA-0926-SM-CGQGE 1 B1 6 pieces; atherosclerosis 8 Blood Vessel Artery - Aorta 0001496 157 431 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99358 843926 0.975183 0.995132 0.831517 25298 1 76 0.00360425 531 0 2.09945e+08 0.0244198 361586 2.10972e+08 1.52669e+07 25350 1.04617e+08 0 0.143667 0.995132 0.827469 2.09945e+08 0.00338587 4.51075e+07 1.54317e+07 4.53826e+07 426 4.53449e+07 3.85356e+07 0.00350111 4.53919e+07 50.0259 0.00171391 0.996684 0 50.152 GTEX-1K2DA-1026-SM-CGQGF 1 B1 6 pieces; includes up to ~10% mostly attached fat 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 159 429 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990745 518748 0.967493 0.992648 0.793106 26764 1 76 0.00342754 527 0 1.69573e+08 0.0323536 2.43076e+06 1.70829e+08 1.1399e+07 26830 8.44623e+07 0 0.174387 0.992648 0.787275 1.69573e+08 0.00384092 3.72356e+07 2.17183e+07 3.76931e+07 486 3.74953e+07 2.02009e+07 0.00362279 3.76991e+07 50.1355 0.0142292 0.994551 0 50.3053 GTEX-1K2DA-1126-SM-CGQGG 1 B1 2 pieces; predominantly fat, but with several larger vessels and portion of muscularis 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 160 428 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.9933 849221 0.976142 0.995045 0.83709 25153 1 76 0.00358147 526 0 1.91831e+08 0.0235756 1.73231e+06 1.92786e+08 1.4172e+07 25196 9.559e+07 0 0.139052 0.995045 0.832942 1.91831e+08 0.00347501 4.22049e+07 2.08587e+07 4.27916e+07 449 4.27706e+07 3.25471e+07 0.00353118 4.24793e+07 49.8291 0.00898564 0.99679 0 50.3451 GTEX-1K2DA-1226-SM-CGQGH 1 B1 2 pieces; prostatitis 7.9 Prostate Prostate 0002367 166 422 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993069 782105 0.969573 0.994805 0.789471 28055 1 76 0.00351179 387 0 2.02567e+08 0.0300808 849312 2.03625e+08 1.37303e+07 28126 1.00933e+08 0 0.180102 0.994805 0.78537 2.02567e+08 0.0036169 4.43806e+07 2.01482e+07 4.47053e+07 410 4.467e+07 3.15967e+07 0.00356142 4.46862e+07 50.0091 0.00417097 0.996541 0 50.1822 GTEX-1K2DA-1326-SM-CGQGP 1 B1 2 pieces; spermatogenesis is present, focal hyalinization of tubules 6.9 Testis Testis 0000473 175 413 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.992564 680800 0.946172 0.994163 0.74767 36036 1 76 0.00359407 382 0 2.0395e+08 0.0536049 3.53199e+06 2.05147e+08 1.39181e+07 36157 1.0164e+08 0 0.198502 0.994163 0.743306 2.0395e+08 0.00347959 4.3781e+07 2.47022e+07 4.4113e+07 411 4.41649e+07 2.68925e+07 0.00354 4.39613e+07 49.8845 0.0172169 0.995762 0 50.1889 GTEX-1K2DA-1526-SM-CGQGQ 1 B1 2 pieces; both include ~10% fat/vessels/connective tissue, mild to moderate autolysis 8 Thyroid Thyroid 0002046 183 405 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99309 679784 0.969412 0.994807 0.766986 27361 1 76 0.00350523 382 0 1.93265e+08 0.0302872 503068 1.94274e+08 1.30985e+07 27454 9.63007e+07 0 0.202426 0.994807 0.763003 1.93265e+08 0.00370178 4.25303e+07 1.70379e+07 4.27212e+07 411 4.27612e+07 3.2261e+07 0.00359805 4.27318e+07 49.9828 0.00258948 0.996525 0 50.112 GTEX-1K2DA-1626-SM-CGQGB 1 B1 6 pieces; predominantly target muscularis with portions of residual attached submucosa and mucosa 8.5 Colon Colon - Sigmoid 0001159 200 388 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99283 778586 0.975744 0.994625 0.84612 25210 1 76 0.00339038 542 0 1.961e+08 0.0239754 919624 1.97159e+08 1.30718e+07 25250 9.77011e+07 0 0.129624 0.994625 0.841572 1.961e+08 0.00365338 4.23888e+07 1.62754e+07 4.2638e+07 440 4.25985e+07 3.51438e+07 0.00351461 4.2695e+07 50.0566 0.00466437 0.996421 0 50.1465 GTEX-1K2DA-1726-SM-CGQGS 1 B1 2 pieces; predominantly fibrocollagenous stroma with scattered ducts, minor component of fat 8.2 Breast Breast - Mammary Tissue 0008367 189 399 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.993196 758593 0.96556 0.994792 0.761676 28223 1 76 0.00361156 416 0 2.04773e+08 0.0341568 609635 2.05845e+08 1.45995e+07 28315 1.02039e+08 0 0.203884 0.994792 0.757709 2.04773e+08 0.00346212 4.47887e+07 1.98379e+07 4.51092e+07 420 4.51379e+07 3.23716e+07 0.00354099 4.5008e+07 49.9279 0.00296163 0.996388 0 50.1783 GTEX-1K2DA-1826-SM-CGQGT 1 B1 6 pieces; well trimmed with <10% attached and internal fat, epidermis measures 26 microns 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 199 389 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990086 682964 0.972325 0.991913 0.822924 25835 1 76 0.00360043 562 0 1.71383e+08 0.0274078 771512 1.7278e+08 1.19912e+07 25884 8.5368e+07 0 0.149402 0.991913 0.816269 1.71383e+08 0.00386052 3.70462e+07 2.16738e+07 3.72603e+07 462 3.7248e+07 3.0063e+07 0.00372331 3.73192e+07 50.0478 0.00446527 0.99374 0 50.144 GTEX-1K2DA-1926-SM-CGQGU 1 B1 2 pieces; 30-60% fat and epineurium 7.3 Nerve Nerve - Tibial 0001323 207 381 BP-70539 RNA Extraction from Paxgene-derived Lysate Plate Based 01/08/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991625 568215 0.965389 0.99349 0.746944 26810 1 76 0.0037462 535 0 1.60282e+08 0.0343676 585748 1.61332e+08 1.2035e+07 26885 7.98092e+07 0 0.218445 0.99349 0.742082 1.60282e+08 0.00397629 3.5188e+07 1.40097e+07 3.53897e+07 447 3.53439e+07 2.23745e+07 0.00385489 3.5473e+07 50.0912 0.0036307 0.995355 0 50.1428 GTEX-1K2DA-2026-SM-CGQGK 1 B1 6 pieces; full thickness sections 7.5 Colon Colon - Transverse 0001157 224 364 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.99014 792237 0.974277 0.99231 0.833842 25050 1 76 0.00358821 524 0 1.76781e+08 0.0252117 3.92655e+06 1.78151e+08 1.25024e+07 25091 8.80083e+07 0 0.140435 0.99231 0.827429 1.76781e+08 0.00388412 3.93872e+07 2.22762e+07 3.97033e+07 460 3.96016e+07 2.43792e+07 0.00372796 3.97622e+07 50.1012 0.0220405 0.99448 0 50.1999 GTEX-1K2DA-2126-SM-CGQGL 0 B1 2 pieces; mature fat 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 213 375 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.991773 754077 0.974168 0.993755 0.828315 24233 1 76 0.00354578 523 0 1.56456e+08 0.0255432 1.12454e+06 1.57439e+08 1.15413e+07 24278 7.78937e+07 0 0.145853 0.993755 0.823142 1.56456e+08 0.00389484 3.43849e+07 1.55644e+07 3.46251e+07 450 3.46297e+07 2.43089e+07 0.00371067 3.46272e+07 49.9982 0.00714269 0.995737 0 50.174 GTEX-1K2DA-2226-SM-CGQGM 0 B1 2 pieces; includes ~10-15% internal and external fat/vessels, Pacinian corpuscle and detached fragment of tendon 8.5 Muscle Muscle - Skeletal 0011907 220 368 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.994644 767152 0.982892 0.996089 0.881143 22312 1 76 0.00331159 400 0 2.08711e+08 0.0168938 1.70025e+06 2.09531e+08 1.48399e+07 22335 1.04075e+08 0 0.101749 0.996089 0.877697 2.08711e+08 0.00298933 4.54683e+07 3.10404e+07 4.63007e+07 416 4.61371e+07 3.84504e+07 0.00315942 4.58084e+07 49.8212 0.00811458 0.997535 0 50.4535 GTEX-1K2DA-2326-SM-CGQGN 1 B1 2 pieces; intimal thickening 6.6 Blood Vessel Artery - Tibial 0007610 225 363 BP-70497 RNA Extraction from Paxgene-derived Lysate Plate Based 01/07/2016 LCSET-9104 06/20/2016 TruSeq.v1 RNASEQ 0.990372 726081 0.970838 0.992145 0.816842 24891 1 76 0.00375966 525 0 1.77326e+08 0.0288799 745762 1.7873e+08 1.33433e+07 24942 8.82969e+07 0 0.153996 0.992145 0.810425 1.77326e+08 0.00380682 3.80742e+07 1.45996e+07 3.84394e+07 442 3.82518e+07 2.78091e+07 0.00378195 3.84999e+07 50.1616 0.00417256 0.993918 0 50.2387 GTEX-1K2DU-0003-SM-DJWWE B1 Blood Whole Blood 0013756 383 BP-61441 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/09/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1K2DU-0004-SM-E6UGM B1 Blood Whole Blood 0013756 383 BP-61441 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/09/2015 LCSET-11020 05/20/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1K2DU-0005-SM-DIPE8 B1 8.1 Blood Whole Blood 0013756 383 BP-61603 RNA isolation_PAXgene Blood RNA (Manual) 03/13/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.965126 801730 0.971146 0.966375 0.809411 17960 1 76 0.00222802 133 0 1.08884e+08 0.0275113 100771 1.12672e+08 8.82168e+06 17967 5.41731e+07 0 0.161735 0.966375 0.782195 1.08884e+08 0.00332344 2.54765e+07 1.88298e+08 2.56066e+07 166 2.56719e+07 3.03727e+07 0.00277502 2.55784e+07 49.9087 0.000894373 0.967625 0 50.1273 GTEX-1K2DU-0126-SM-E9TIU 1 B1 2 pieces, mild goitrous features. ~1mm nubbin of adherent fat, delineated 5.6 Thyroid Thyroid 0002046 394 1221 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.975577 339580 0.959907 0.977207 0.700651 24341 1 76 0.00219414 152 0 7.90561e+07 0.0398889 316788 8.09001e+07 3.68168e+06 24389 3.9331e+07 0 0.259256 0.977207 0.684682 7.90561e+07 0.00281917 1.71412e+07 9.6565e+06 1.73307e+07 175 1.73111e+07 9.79401e+06 0.00250614 1.72842e+07 49.9611 0.00391579 0.978838 0 50.2748 GTEX-1K2DU-0226-SM-DIPF6 1 B1 2 pieces, no abnormalities 7.5 Heart Heart - Atrial Appendage 0006631 408 1207 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993723 419690 0.979191 0.994996 0.820417 22301 1 76 0.0020092 268 0 9.22766e+07 0.0205691 1.56452e+06 9.27407e+07 6.77817e+06 22322 4.59888e+07 0 0.158773 0.994996 0.816312 9.22766e+07 0.00304132 2.00614e+07 1.21526e+07 2.03548e+07 308 2.03733e+07 1.44347e+07 0.0025246 2.01517e+07 49.7266 0.0168699 0.996269 0 50.3631 GTEX-1K2DU-0526-SM-D4P2Y 1 B1 2 pieces, moderate edema 7.1 Lung Lung 0008952 431 1184 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992703 353584 0.97896 0.994149 0.781579 24820 1 76 0.00252896 276 0 1.15565e+08 0.0207055 1.02679e+06 1.16245e+08 1.43942e+07 24857 5.75649e+07 0 0.197381 0.994149 0.777006 1.15565e+08 0.00387032 2.56853e+07 1.13492e+07 2.59822e+07 330 2.59599e+07 2.05436e+07 0.00319867 2.58684e+07 49.9118 0.00883301 0.995595 0 50.2873 GTEX-1K2DU-0726-SM-DIPF7 1 B1 2 pieces, ~60% fat, ~40% hyperplastic fascia/mesothelial lining/vascular elements, rep delineated 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 457 1158 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992016 322932 0.978849 0.99298 0.835289 22471 1 76 0.00214889 211 0 8.9518e+07 0.0208676 249764 9.01509e+07 6.50774e+06 22494 4.46298e+07 0 0.14356 0.99298 0.829425 8.9518e+07 0.0028961 1.97815e+07 9.29438e+06 1.98806e+07 229 1.98711e+07 1.83372e+07 0.00252213 1.98791e+07 50.0102 0.00277051 0.993944 0 50.1249 GTEX-1K2DU-0826-SM-DHXKA 2 B1 2 pieces, cortex; moderately advanced autolysis 5.6 Adrenal Gland Adrenal Gland 0002369 460 1155 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.990402 493212 0.955805 0.991176 0.820616 22384 1 76 0.00210048 268 0 8.57386e+07 0.0439885 5.32952e+06 8.65019e+07 4.67398e+06 22403 4.27518e+07 0 0.135189 0.991176 0.813375 8.57386e+07 0.00251561 1.8324e+07 2.75538e+07 1.89816e+07 318 1.89043e+07 8.60111e+06 0.00230788 1.84577e+07 49.4023 0.0616116 0.991951 0 50.8814 GTEX-1K2DU-0926-SM-DHXKB 3 B1 6 pieces, glomeruli present 5.7 Kidney Kidney - Cortex 0001225 465 1150 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 EXCLUDE 0.989191 152757 0.975395 0.989695 0.832972 21726 1 76 0.00218607 168 0 6.98501e+07 0.0243773 4.06899e+06 7.05774e+07 3.91676e+06 21737 3.48103e+07 0 0.142423 0.989695 0.824388 6.98501e+07 0.00253043 1.54238e+07 1.21133e+07 1.58165e+07 182 1.56856e+07 1.2e+07 0.00235816 1.55968e+07 49.8582 0.0576529 0.990199 0 50.6285 GTEX-1K2DU-1026-SM-DHXKC 2 B1 2 pieces, moderately advanced saponification, Islets largely degenerated. one encircled 6.1 Pancreas Pancreas 0001150 468 1147 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993313 1.33198e+06 0.939489 0.994 0.743959 23684 1 76 0.0022708 172 0 9.06028e+07 0.06032 202564 9.11498e+07 4.878e+06 23716 4.51786e+07 0 0.195529 0.994 0.739495 9.06028e+07 0.00261391 1.96612e+07 4.35237e+07 1.99796e+07 178 1.99618e+07 1.75501e+07 0.00244224 1.97679e+07 49.7559 0.00222232 0.994687 0 50.4016 GTEX-1K2DU-1226-SM-CYPT4 0 B1 6 pieces, no dermal fat; squamous epithelium is ~80 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 481 1134 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994399 237687 0.973468 0.995168 0.754006 23649 1 76 0.00222769 185 0 7.89963e+07 0.0263277 399896 7.93799e+07 5.8684e+06 23685 3.93912e+07 0 0.219462 0.995168 0.750362 7.89963e+07 0.00270181 1.73883e+07 7.70284e+06 1.74992e+07 179 1.74739e+07 1.29034e+07 0.00246456 1.7473e+07 49.9987 0.00503775 0.995936 0 50.159 GTEX-1K2DU-1326-SM-CYPT5 1 B1 6 pieces, adherent serosa/fat up to ~1.5mm, rep delineated; minimal atherosis 6 Blood Vessel Artery - Aorta 0001496 482 1133 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.992207 173326 0.96847 0.992961 0.775503 21936 1 76 0.00239172 141 0 7.04898e+07 0.0311934 333924 7.09895e+07 5.33704e+06 21965 3.51108e+07 0 0.192967 0.992961 0.770044 7.04898e+07 0.0031493 1.51574e+07 6.28394e+06 1.52600e+07 163 1.5195e+07 1.14437e+07 0.00277022 1.52786e+07 50.1372 0.00470385 0.993715 0 50.1688 GTEX-1K2DU-1626-SM-DHXKD 1 B1 2 pieces, confirmed target muscularis 5.9 Esophagus Esophagus - Muscularis 0004648 511 1104 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993778 250259 0.969745 0.99475 0.801552 22756 1 76 0.00223637 271 0 8.52577e+07 0.0300715 1.84872e+06 8.57077e+07 4.72375e+06 22785 4.24803e+07 0 0.168193 0.99475 0.797344 8.52577e+07 0.0028707 1.85688e+07 7.69202e+06 1.8834e+07 267 1.87669e+07 1.12163e+07 0.00255323 1.87164e+07 49.9327 0.02157 0.995721 0 50.3545 GTEX-1K2DU-1726-SM-EV79S 1 B1 6 pieces; squamous mucosa up to ~0.4mm, ~25% of thickness 7.8 Esophagus Esophagus - Mucosa 0006920 514 1101 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.99001 400905 0.969327 0.99113 0.785332 23130 1 76 0.00242785 273 0 9.84217e+07 0.0304507 613404 9.93025e+07 1.0351e+07 23156 4.90412e+07 0 0.183995 0.99113 0.778366 9.84217e+07 0.0039865 2.18626e+07 1.26734e+07 2.20697e+07 272 2.20379e+07 1.63164e+07 0.0032063 2.20041e+07 49.9615 0.00617713 0.992251 0 50.2357 GTEX-1K2DU-2226-SM-CXZJY 2 B1 2 pieces; moderately advanced autolysis; spermatogenesis appears reduced 6.5 Testis Testis 0000473 551 1064 BP-75878 RNA Extraction from Paxgene-derived Lysate Plate Based 06/21/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992527 410465 0.938163 0.993797 0.729218 33096 1 76 0.00212439 214 0 9.73929e+07 0.0616086 1.39199e+06 9.80007e+07 6.65507e+06 33166 4.85325e+07 0 0.208945 0.993797 0.724695 9.73929e+07 0.00270455 2.03073e+07 1.48476e+07 2.07569e+07 241 2.07373e+07 1.38393e+07 0.0024141 2.04403e+07 49.6394 0.0142039 0.995067 0 50.5475 GTEX-1K2DU-2326-SM-E9TIV 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~60 microns 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 560 1055 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.981591 479827 0.972782 0.983567 0.790102 23508 1 76 0.00203386 193 0 8.17007e+07 0.0270135 542178 8.30657e+07 3.65931e+06 23543 4.06378e+07 0 0.18268 0.983567 0.777118 8.17007e+07 0.00271876 1.79476e+07 7.75045e+06 1.81108e+07 194 1.8117e+07 1.4418e+07 0.00237562 1.80988e+07 49.975 0.0065271 0.985544 0 50.2263 GTEX-1K2DU-2526-SM-D3L8V 0 B1 2 pieces adherent;interstitital fat is ~10% of tissue; rep delineated 8 Muscle Muscle - Skeletal 0011907 574 1041 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992729 473486 0.981746 0.994528 0.87572 21087 1 76 0.00221153 392 0 1.17376e+08 0.0180529 1.59148e+06 1.18022e+08 1.12202e+07 21103 5.84807e+07 0 0.106025 0.994528 0.870928 1.17376e+08 0.00315174 2.5755e+07 1.50964e+07 2.60909e+07 343 2.62138e+07 2.21673e+07 0.00268078 2.58217e+07 49.6233 0.0134846 0.996327 0 50.3239 GTEX-1K2DU-2626-SM-D3L8W 0 B1 2 pieces; nubbin of;adherent fat/fibrous tissue up to ~0.2mm, delineated 8 Nerve Nerve - Tibial 0001323 580 1035 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991931 315087 0.975324 0.993912 0.837394 23498 1 76 0.00247304 296 0 9.53509e+07 0.0242923 263921 9.5935e+07 1.03886e+07 23523 4.74805e+07 0 0.13793 0.993912 0.832296 9.53509e+07 0.00332142 2.09655e+07 7.78571e+06 2.11742e+07 283 2.11941e+07 1.84595e+07 0.00289638 2.11238e+07 49.917 0.00275104 0.995893 0 50.2477 GTEX-1K2DU-2726-SM-EXOJQ 0 B1 1 piece, correlates with -2725, longitudinal section of muscular artery. 7 Blood Vessel Artery - Tibial 0007610 582 1033 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984732 173743 0.977245 0.986406 0.852944 21031 1 76 0.00183242 166 0 6.98195e+07 0.0223456 407174 7.07817e+07 3.72008e+06 21046 3.4732e+07 0 0.124302 0.986406 0.841349 6.98195e+07 0.00331029 1.50957e+07 5.10867e+06 1.52298e+07 171 1.51559e+07 1.39477e+07 0.0025701 1.52803e+07 50.2044 0.00575254 0.98808 0 50.2211 GTEX-1K2DU-5001-SM-AN48D B1 Heart Heart - Left Ventricle 0006566 432 ChIP-Seq GTEX-1K9T9-0004-SM-DE1N9 B1 Blood Whole Blood 0013756 384 BP-61600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/13/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1K9T9-0004-SM-DJWYM B1 Blood Whole Blood 0013756 384 BP-61600 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/13/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1K9T9-0006-SM-DIPE9 B1 9.1 Blood Whole Blood 0013756 384 BP-61603 RNA isolation_PAXgene Blood RNA (Manual) 03/13/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992051 888509 0.966216 0.99326 0.78899 20683 1 76 0.00255348 191 0 1.0376e+08 0.0332001 107312 1.04464e+08 7.57628e+06 20707 5.16754e+07 0 0.177226 0.99326 0.783672 1.0376e+08 0.00357875 2.30404e+07 5.32918e+07 2.31575e+07 205 2.32559e+07 2.18229e+07 0.0030655 2.30773e+07 49.8073 0.00102726 0.994469 0 50.1267 GTEX-1K9T9-0126-SM-EVYCF 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~45 microns 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 440 860 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991144 337612 0.967366 0.991846 0.765883 24335 1 76 0.00187357 244 0 8.54846e+07 0.0324305 365126 8.61874e+07 3.68456e+06 24369 4.26154e+07 0 0.201483 0.991846 0.759638 8.54846e+07 0.00301753 1.84985e+07 7.92425e+06 1.86796e+07 209 1.86283e+07 1.40135e+07 0.00244515 1.86081e+07 49.9729 0.00423642 0.992549 0 50.2437 GTEX-1K9T9-0226-SM-E9U6K 0 B1 2 pieces, fascia/vascular elements are ~10% of tissue, rep delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 441 859 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.987845 234919 0.973615 0.98868 0.825974 22304 1 76 0.00176266 196 0 7.61261e+07 0.0260304 737474 7.69977e+07 3.6053e+06 22318 3.79349e+07 0 0.147642 0.98868 0.816623 7.61261e+07 0.0027296 1.67449e+07 6.44504e+06 1.68887e+07 203 1.68442e+07 1.25458e+07 0.00224572 1.68533e+07 50.0135 0.00957787 0.989514 0 50.2137 GTEX-1K9T9-0326-SM-EWRNQ 0 B1 2 pieces, interstitial fat/vascular elements are ~10% of tissue, rep delineated 7 Muscle Muscle - Skeletal 0011907 442 858 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989706 235379 0.982371 0.992516 0.88111 19554 1 76 0.00198364 133 0 6.58204e+07 0.0174498 765548 6.63167e+07 4.39998e+06 19560 3.27653e+07 0 0.10126 0.992516 0.874516 6.58204e+07 0.00285863 1.44246e+07 6.4582e+06 1.4586e+07 161 1.4592e+07 1.32212e+07 0.00240966 1.45666e+07 49.9564 0.0115438 0.995326 0 50.2781 GTEX-1K9T9-0426-SM-E9U6L 0 B1 2 pieces, adherent rims/nubbins of fat up to ~1.5mm, delineated 5.7 Nerve Nerve - Tibial 0001323 444 856 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986791 122827 0.969938 0.987468 0.796114 22661 1 76 0.00178761 162 0 6.18723e+07 0.0297447 266898 6.26576e+07 3.00423e+06 22683 3.08346e+07 0 0.173825 0.987468 0.786137 6.18723e+07 0.00256021 1.36373e+07 4.79698e+06 1.37428e+07 154 1.36825e+07 9.91944e+06 0.00217365 1.37396e+07 50.1039 0.00425963 0.988144 0 50.1926 GTEX-1K9T9-0526-SM-CYPT6 0 B1 2 pieces, no significant atherosis or adherent fat 5.9 Blood Vessel Artery - Tibial 0007610 445 855 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993822 172779 0.975101 0.994566 0.850461 20919 1 76 0.00208674 146 0 6.59711e+07 0.0245592 294531 6.63315e+07 4.96336e+06 20930 3.28771e+07 0 0.124641 0.994566 0.845839 6.59711e+07 0.00283032 1.42465e+07 4.77669e+06 1.43164e+07 163 1.42437e+07 1.29005e+07 0.00245825 1.43717e+07 50.2236 0.00444029 0.995309 0 50.1223 GTEX-1K9T9-0626-SM-CXZKY 2 B1 2 pieces, moderate congestion 6.3 Spleen Spleen 0002106 481 819 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991404 330870 0.954215 0.992846 0.692169 24127 1 76 0.00252843 139 0 7.37153e+07 0.0453738 285163 7.42465e+07 5.20120e+06 24168 3.66871e+07 0 0.262047 0.992846 0.687217 7.37153e+07 0.00348802 1.59296e+07 1.10302e+07 1.61271e+07 157 1.6116e+07 9.61226e+06 0.00300753 1.60479e+07 49.8942 0.00384076 0.994287 0 50.308 GTEX-1K9T9-0726-SM-CXZJZ 1 B1 2 pieces, minimal congestion 7.6 Liver Liver 0001114 484 816 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993837 289952 0.973412 0.995269 0.795927 22519 1 76 0.00195367 370 0 1.00456e+08 0.0262378 857185 1.00934e+08 6.43587e+06 22549 5.00582e+07 0 0.177485 0.995269 0.792161 1.00456e+08 0.00289339 2.17913e+07 1.38655e+07 2.22753e+07 352 2.22386e+07 1.45208e+07 0.00242285 2.19601e+07 49.6849 0.00849253 0.996701 0 50.5492 GTEX-1K9T9-0826-SM-EAZ4X 1 B1 2 pieces, no abnormalities 6.4 Thyroid Thyroid 0002046 487 813 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989252 400598 0.968812 0.990114 0.772627 24332 1 76 0.00206698 200 0 8.92994e+07 0.0309212 267498 9.01911e+07 7.56062e+06 24370 4.44826e+07 0 0.196185 0.990114 0.764989 8.92994e+07 0.00310377 1.95285e+07 7.99058e+06 1.96588e+07 215 1.96076e+07 1.45415e+07 0.00258493 1.96562e+07 50.0618 0.0029659 0.990976 0 50.1663 GTEX-1K9T9-0926-SM-D3L9C 1 B1 2 pieces, emphysematous changes 8.7 Lung Lung 0008952 489 811 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991365 474322 0.975994 0.99333 0.782907 25335 1 76 0.00273411 276 0 1.13533e+08 0.023515 257827 1.14295e+08 1.17617e+07 25379 5.65082e+07 0 0.193087 0.99333 0.777685 1.13533e+08 0.00360099 2.52147e+07 1.14476e+07 2.54206e+07 316 2.54889e+07 2.04446e+07 0.00316669 2.53586e+07 49.8719 0.0022558 0.995295 0 50.2033 GTEX-1K9T9-1026-SM-D3L9D 1 B1 1 piece artery, ensquared, no atherosis, adherent fat up to ~1mm; other piece is epicardial fat/myocardium 7.5 Blood Vessel Artery - Coronary 0001621 491 809 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990871 403364 0.97309 0.993275 0.8002 24037 1 76 0.00254444 169 0 8.74715e+07 0.0265965 217566 8.80637e+07 9.29622e+06 24067 4.35181e+07 0 0.172891 0.993275 0.794818 8.74715e+07 0.00404479 1.90293e+07 7.6429e+06 1.92027e+07 200 1.92313e+07 1.58239e+07 0.0032928 1.92019e+07 49.9618 0.00247055 0.995679 0 50.2267 GTEX-1K9T9-1126-SM-D3L9E 1 B1 2 pieces, patchy mild/moderate myocarditis, lymphocytic, with myocyte destruction 7.5 Heart Heart - Left Ventricle 0006566 492 808 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992214 244890 0.976512 0.994471 0.836888 21641 1 76 0.00239726 154 0 6.79286e+07 0.0233505 1.85068e+06 6.83062e+07 7.24386e+06 21653 3.38256e+07 0 0.139624 0.994471 0.832261 6.79286e+07 0.00353185 1.48803e+07 7.08572e+06 1.52157e+07 190 1.51802e+07 8.78886e+06 0.00296326 1.50514e+07 49.7871 0.0270938 0.996728 0 50.5572 GTEX-1K9T9-1226-SM-EVR4R 1 B1 2 pieces, no abnormalities 7.8 Heart Heart - Atrial Appendage 0006631 494 806 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 EXCLUDE 0.98998 348019 0.979487 0.991937 0.812203 24963 1 76 0.00224243 281 0 1.18524e+08 0.0201071 295308 1.19487e+08 8.86765e+06 25002 5.9003e+07 0 0.167284 0.991937 0.805654 1.18524e+08 0.00329938 2.61197e+07 1.20718e+07 2.63939e+07 315 2.64095e+07 2.44163e+07 0.00276986 2.63178e+07 49.913 0.00247146 0.993894 0 50.2611 GTEX-1K9T9-1326-SM-E6CJN 1 B1 6 pieces, no significant atherosis, adherent serosa/fat/peripheral nerve elments up to ~3mm, rep delineated 6.5 Blood Vessel Artery - Aorta 0001496 495 805 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99328 197881 0.973455 0.994291 0.792657 23236 1 76 0.00205218 276 0 1.01271e+08 0.0261061 209023 1.01852e+08 6.30039e+06 23269 5.04373e+07 0 0.180798 0.994291 0.788131 1.01271e+08 0.0026732 2.20077e+07 7.10515e+06 2.21214e+07 289 2.20697e+07 1.91743e+07 0.00236237 2.2151e+07 50.092 0.00205222 0.995301 0 50.1289 GTEX-1K9T9-1426-SM-DIPFQ 1 B1 2 pieces, atrophic ductal lobular units present, rep ensquared 7.1 Breast Breast - Mammary Tissue 0008367 498 802 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992723 432524 0.970524 0.99396 0.764479 25182 1 76 0.00229014 211 0 9.92343e+07 0.02907 502682 9.98373e+07 7.62654e+06 25228 4.94313e+07 0 0.206044 0.99396 0.759862 9.92343e+07 0.00321079 2.18345e+07 1.03879e+07 2.19878e+07 252 2.20038e+07 1.6229e+07 0.00274989 2.19401e+07 49.9275 0.00503501 0.995197 0 50.1749 GTEX-1K9T9-1526-SM-DIPFR 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~40-45 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 500 800 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992506 464182 0.966971 0.993838 0.746446 25540 1 76 0.00222119 383 0 1.11179e+08 0.0328315 701428 1.11868e+08 8.54204e+06 25587 5.53906e+07 0 0.220525 0.993838 0.741846 1.11179e+08 0.00321332 2.43529e+07 1.16561e+07 2.45403e+07 342 2.45217e+07 1.63747e+07 0.00271659 2.45126e+07 49.9907 0.00627011 0.99517 0 50.1916 GTEX-1K9T9-1626-SM-DIPFS 1 B1 2 pieces, ~150-20% vascular elements/fascia/mesothelial hyperplasia, rep delineated 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 500 800 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311,LCSET-10535 01/26/2017 TruSeq.v1 RNASEQ 0.992282 602891 0.97353 0.993811 0.802652 24904 1 76 0.00202722 376 0 1.16658e+08 0.0261625 736629 1.17384e+08 7.2087e+06 24944 5.80719e+07 0 0.170878 0.993811 0.797684 1.16658e+08 0.00294999 2.57027e+07 1.26577e+07 2.58655e+07 377 2.59159e+07 1.96397e+07 0.0024879 2.58252e+07 49.9124 0.00627537 0.99534 0 50.1578 GTEX-1K9T9-1726-SM-CXZK1 2 B1 2 pieces, mildl-moderate saponification; islets still visible, rep encircled, but with early degenerative changes 6.3 Pancreas Pancreas 0001150 501 799 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994108 281670 0.972353 0.995275 0.779734 22743 1 76 0.00237469 123 0 8.04672e+07 0.0275001 273520 8.08492e+07 5.3827e+06 22777 4.01011e+07 0 0.192619 0.995275 0.776049 8.04672e+07 0.00312156 1.81226e+07 1.42179e+07 1.84549e+07 141 1.84211e+07 1.88092e+07 0.00274769 1.82509e+07 49.7679 0.00338309 0.996442 0 50.4543 GTEX-1K9T9-1826-SM-CXZK2 1 B1 6 pieces, glomeruli present 6.8 Kidney Kidney - Cortex 0001225 503 797 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993377 167923 0.974783 0.994867 0.836925 21891 1 76 0.00189069 119 0 5.30228e+07 0.0249893 1.66038e+06 5.32964e+07 3.49107e+06 21904 2.64154e+07 0 0.137859 0.994867 0.832629 5.30228e+07 0.00289923 1.1701e+07 5.91066e+06 1.20746e+07 149 1.20621e+07 6.8078e+06 0.00239421 1.17853e+07 49.4197 0.0311537 0.996356 0 50.7858 GTEX-1K9T9-2026-SM-CXZK3 2 B1 6 pieces, partial sloughing of squamous mucosa, residual up to ~0.25mm 6.8 Esophagus Esophagus - Mucosa 0006920 543 757 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993342 189359 0.971939 0.994578 0.747546 23345 1 76 0.00218938 158 0 7.867e+07 0.0278982 276943 7.90989e+07 5.43252e+06 23377 3.91991e+07 0 0.224394 0.994578 0.743493 7.867e+07 0.00266929 1.75027e+07 8.13095e+06 1.77349e+07 178 1.76974e+07 1.21918e+07 0.00242903 1.7639e+07 49.9173 0.00350122 0.995814 0 50.3294 GTEX-1K9T9-2426-SM-DHXKT 1 B1 2 pieces, stroma, no abnormality, post menopausal atrophy 7.6 Ovary Ovary 0000992 549 751 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993086 233173 0.967714 0.993736 0.752755 22532 1 76 0.0023451 133 0 6.64925e+07 0.0320271 57527 6.69117e+07 3.82674e+06 22569 3.31377e+07 0 0.214958 0.993736 0.74804 6.64925e+07 0.0024383 1.45333e+07 6.90478e+06 1.46965e+07 137 1.46726e+07 1.31802e+07 0.00239167 1.46025e+07 49.8802 0.000859745 0.994385 0 50.2792 GTEX-1K9T9-2526-SM-D3L9B 1 B1 2 pieces, myometrium; trace residual basalis endometrium delineated (~0.5mm) 8 Uterus Uterus 0000995 552 748 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.99105 372970 0.96735 0.993116 0.778095 24070 1 76 0.00264863 209 0 9.52239e+07 0.0323649 81952 9.5884e+07 1.0598e+07 24108 4.73933e+07 0 0.189255 0.993116 0.772739 9.52239e+07 0.00368603 2.06801e+07 8.61822e+06 2.09033e+07 212 2.09072e+07 1.73458e+07 0.00316625 2.08656e+07 49.9502 0.0008547 0.995183 0 50.2683 GTEX-1K9T9-2726-SM-D4P3E 2 B1 6 pieces, target lymphoid aggregates ~20% total tissue, rep delineated 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 562 738 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991044 233619 0.966675 0.992354 0.766812 25603 1 76 0.00314552 207 0 9.50744e+07 0.0311098 836571 9.5807e+07 1.14852e+07 25636 4.72534e+07 0 0.199863 0.992354 0.760949 9.50744e+07 0.00441598 2.09149e+07 1.26796e+07 2.12019e+07 240 2.12189e+07 1.4061e+07 0.00377991 2.10123e+07 49.7554 0.00873184 0.993663 0 50.3408 GTEX-1K9T9-2826-SM-D4P3F 3 B1 6 pieces, target mucosa up to ~0.3mm, advanced autolysis, partially sloughed 6.4 Colon Colon - Transverse 0001157 563 737 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.990542 263972 0.968189 0.991835 0.793604 24930 1 76 0.00317379 208 0 9.01132e+07 0.0293318 482125 9.0855e+07 1.04618e+07 24969 4.47737e+07 0 0.174586 0.991835 0.787124 9.01132e+07 0.00446984 1.97764e+07 1.22552e+07 2.00306e+07 221 2.00215e+07 1.38046e+07 0.00382097 1.98934e+07 49.8396 0.00530653 0.993128 0 50.3192 GTEX-1K9T9-2926-SM-E9TKD 1 B1 6 pieces, confirmed target muscularis 6.5 Colon Colon - Sigmoid 0001159 565 735 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98507 640569 0.976567 0.986724 0.819249 22081 1 76 0.00195394 154 0 7.53153e+07 0.0231853 277201 7.63286e+07 3.38406e+06 22102 3.74383e+07 0 0.157318 0.986724 0.808372 7.53153e+07 0.00268886 1.64389e+07 5.84084e+06 1.65855e+07 174 1.66375e+07 1.41467e+07 0.00232079 1.65084e+07 49.8053 0.00363168 0.988377 0 50.2219 GTEX-1K9T9-5004-SM-AN48E B1 Muscle Muscle - Skeletal 0011907 443 ChIP-Seq GTEX-1K9T9-5010-SM-AN48G B1 Heart Heart - Left Ventricle 0006566 492 ChIP-Seq GTEX-1KAFJ-0003-SM-DE1KV B1 Blood Whole Blood 0013756 -211 BP-61652 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KAFJ-0003-SM-DJWYT B1 Blood Whole Blood 0013756 -211 BP-61652 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KAFJ-0006-SM-9WPO1 B1 8.7 Blood Whole Blood 0013756 -211 BP-61653 RNA isolation_PAXgene Blood RNA (Manual) 03/16/2015 LCSET-7429 07/20/2015 TruSeq.v1 RNASEQ 0.976528 352112 0.976387 0.977965 0.825912 18077 1 76 0.00632111 98 0 7.72111e+07 0.0220659 255339 7.89508e+07 1.26211e+07 18084 3.84134e+07 0 0.150475 0.977965 0.807714 7.72111e+07 0.00720229 1.78940e+07 8.92232e+07 1.80381e+07 121 1.80393e+07 1.98195e+07 0.00676105 1.8015e+07 49.9663 0.00323415 0.979403 0 50.2005 GTEX-1KAFJ-0126-SM-DIPEK 0 B1 6 pieces, 3 large, 3 small; well trimmed; <5% dermal fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 475 1321 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.991574 339647 0.972783 0.992891 0.779356 23400 1 76 0.0025774 235 0 9.27984e+07 0.0269791 827229 9.34628e+07 7.38286e+06 23438 4.62252e+07 0 0.193428 0.992891 0.773815 9.27984e+07 0.00368019 2.02889e+07 1.21569e+07 2.0452e+07 230 2.04415e+07 1.46194e+07 0.00312806 2.04186e+07 49.972 0.00885089 0.994208 0 50.2002 GTEX-1KAFJ-0226-SM-DIPEL 1 B1 2 pieces; gynecomastoid features: fibrous stroma and ducts, 10% fat 6.4 Breast Breast - Mammary Tissue 0008367 479 1317 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311,LCSET-10535 01/26/2017 TruSeq.v1 RNASEQ 0.992567 482542 0.974281 0.993805 0.774528 25365 1 76 0.00219909 381 0 1.22684e+08 0.0253879 546199 1.23449e+08 7.29184e+06 25422 6.1099e+07 0 0.199753 0.993805 0.76973 1.22684e+08 0.00296602 2.69669e+07 1.21238e+07 2.71416e+07 370 2.71647e+07 2.09451e+07 0.00258208 2.70922e+07 49.9332 0.00442449 0.995043 0 50.1615 GTEX-1KAFJ-0326-SM-DHXJG 1 B1 2 pieces; moderate vascular congestion, alveolar hemorrhages and pigmented macrophages 6.7 Lung Lung 0008952 520 1276 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992283 373803 0.973895 0.992965 0.764275 24512 1 76 0.0027118 212 0 9.5176e+07 0.0256849 414593 9.58503e+07 5.31604e+06 24560 4.74196e+07 0 0.20962 0.992965 0.758898 9.5176e+07 0.00291692 2.11018e+07 1.3319e+07 2.13655e+07 250 2.13479e+07 1.55434e+07 0.00281429 2.11829e+07 49.8059 0.00432542 0.993647 0 50.3105 GTEX-1KAFJ-0426-SM-DHXJH 2 B1 2 pieces; 5% fat at edge of 1 piece 6.1 Thyroid Thyroid 0002046 527 1269 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992609 338188 0.971831 0.993383 0.78415 24717 1 76 0.00272304 210 0 9.43027e+07 0.0278235 375303 9.49308e+07 7.07969e+06 24758 4.69888e+07 0 0.18768 0.993383 0.778962 9.43027e+07 0.00316578 2.06889e+07 9.19595e+06 2.09111e+07 222 2.08898e+07 1.68139e+07 0.00294424 2.07848e+07 49.874 0.00395344 0.994157 0 50.2671 GTEX-1KAFJ-0526-SM-DIPEM 2 B1 6 pieces; up to 20% external fibrofatty content 6 Esophagus Esophagus - Muscularis 0004648 535 1261 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.9928 403814 0.972062 0.994023 0.779661 23612 1 76 0.00246581 275 0 9.90431e+07 0.0277115 1.28095e+06 9.96387e+07 8.16596e+06 23657 4.93442e+07 0 0.192401 0.994023 0.775 9.90431e+07 0.00335539 2.15378e+07 1.01948e+07 2.17147e+07 274 2.17007e+07 1.49222e+07 0.00291005 2.16702e+07 49.9648 0.012856 0.995246 0 50.2045 GTEX-1KAFJ-0626-SM-D3L8X 1 B1 6 pieces; well dissected; only 1 small extraneous submucosal gland 8.4 Esophagus Esophagus - Mucosa 0006920 536 1260 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992325 573167 0.967158 0.994155 0.783285 23131 1 76 0.00265776 274 0 9.96181e+07 0.0325956 586782 1.00204e+08 1.01744e+07 23159 4.9609e+07 0 0.183873 0.994155 0.778707 9.96181e+07 0.00362469 2.21038e+07 1.65713e+07 2.23499e+07 264 2.23798e+07 1.68136e+07 0.00314034 2.2252e+07 49.8568 0.00585589 0.995985 0 50.2768 GTEX-1KAFJ-0726-SM-CXZKF 2 B1 2 pieces; moderate centrilobular congestion with mild centrilobular macrovesicular steatosis 6.4 Liver Liver 0001114 545 1251 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993021 217249 0.975924 0.994698 0.802475 21805 1 76 0.00223417 199 0 9.02603e+07 0.0234639 1.93304e+06 9.07415e+07 5.42935e+06 21830 4.49482e+07 0 0.173448 0.994698 0.79822 9.02603e+07 0.00345571 1.9591e+07 1.23893e+07 1.99291e+07 252 1.98969e+07 1.31204e+07 0.00284391 1.97592e+07 49.8264 0.0213027 0.996374 0 50.4277 GTEX-1KAFJ-0826-SM-CYPTF 1 B1 2 pieces; scattered empty spaces, possibly due to manual compression 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 547 1249 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994545 179374 0.977705 0.995328 0.799451 22127 1 76 0.00245022 135 0 6.24534e+07 0.0219548 467049 6.27465e+07 4.60915e+06 22150 3.11293e+07 0 0.178254 0.995328 0.795716 6.24534e+07 0.00307805 1.37695e+07 6.29428e+06 1.38608e+07 150 1.38266e+07 1.04023e+07 0.00276389 1.38565e+07 50.054 0.00744342 0.996111 0 50.1653 GTEX-1KAFJ-1026-SM-D4P2Z 2 B1 2 pieces; moderate to severe red pulp vascular congestion 6.7 Spleen Spleen 0002106 559 1237 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-10263,LCSET-9920 11/30/2016 TruSeq.v1 RNASEQ 0.989232 341723 0.958545 0.989287 0.728463 25040 1 76 0.00451833 206 0 9.72594e+07 0.0406134 1.26858e+06 9.83126e+07 1.63578e+07 25081 4.83522e+07 0 0.230082 0.989287 0.720659 9.72594e+07 0.00438709 2.08764e+07 1.73221e+07 2.15567e+07 223 2.14781e+07 1.24525e+07 0.00445271 2.097e+07 49.4016 0.0129035 0.989343 0 50.8016 GTEX-1KAFJ-1226-SM-D4P46 2 B1 2 pieces, 1 with well preserved acini and periurethral ducts; the other has severely autolyzed glands and intact stroma 6.4 Prostate Prostate 0002367 572 1224 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993387 207582 0.960813 0.994674 0.758435 24989 1 76 0.00271503 203 0 8.59351e+07 0.0389825 2.28357e+06 8.63952e+07 1.1017e+07 25024 4.28126e+07 0 0.202379 0.994674 0.754396 8.59351e+07 0.00401037 1.8759e+07 1.06536e+07 1.90332e+07 216 1.8982e+07 1.05522e+07 0.00336186 1.89172e+07 49.9145 0.0264316 0.995962 0 50.3629 GTEX-1KAFJ-1726-SM-CY8IC 2 B1 6 muscular pieces, 5 large, 1 small, plus 3 small nonmuscular fragments 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 588 1208 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769,LCSET-9874 09/29/2016 TruSeq.v1 RNASEQ 0.991613 425358 0.97095 0.992876 0.775265 24119 1 76 0.0034588 374 0 1.08349e+08 0.0288279 1.85453e+06 1.09126e+08 8.52428e+06 24156 5.39071e+07 0 0.195686 0.992876 0.769742 1.08349e+08 0.00467916 2.3614e+07 9.60455e+06 2.37166e+07 344 2.38088e+07 1.45827e+07 0.0040682 2.36529e+07 49.8358 0.0169943 0.99414 0 50.1084 GTEX-1KAFJ-2026-SM-CY8ID 1 B1 6 pieces; well trimmed; <5% dermal fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 614 1182 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989581 260810 0.972064 0.991519 0.785834 23485 1 76 0.0049112 181 0 7.7719e+07 0.0276817 574173 7.83838e+07 9.55829e+06 23514 3.86706e+07 0 0.18623 0.991519 0.779169 7.7719e+07 0.00787947 1.69217e+07 8.75974e+06 1.70128e+07 165 1.70247e+07 1.25743e+07 0.00639244 1.70543e+07 50.0435 0.00732515 0.993456 0 50.1343 GTEX-1KAFJ-2126-SM-CY8IE 1 B1 2 pieces; 10% & 30% fat content 6.7 Nerve Nerve - Tibial 0001323 620 1176 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.991411 230185 0.967566 0.992935 0.736398 24504 1 76 0.00447997 174 0 8.46603e+07 0.0321503 408771 8.52627e+07 8.70788e+06 24555 4.21473e+07 0 0.231168 0.992935 0.731195 8.46603e+07 0.00709903 1.8575e+07 7.69e+06 1.86223e+07 173 1.86196e+07 1.24865e+07 0.00578749 1.86987e+07 50.106 0.00479426 0.994459 0 50.0637 GTEX-1KAFJ-2226-SM-D3L8Y 0 B1 2 pieces; no plaques; well trimmed 7.6 Blood Vessel Artery - Tibial 0007610 623 1173 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991776 506327 0.975266 0.993779 0.830447 22420 1 76 0.00254657 276 0 1.07152e+08 0.0243496 405746 1.07823e+08 1.12009e+07 22447 5.33358e+07 0 0.14482 0.993779 0.82528 1.07152e+08 0.00352659 2.29538e+07 7.89596e+06 2.31804e+07 310 2.32004e+07 2.09444e+07 0.00303559 2.31323e+07 49.9265 0.00376307 0.995782 0 50.2455 GTEX-1KAFJ-2326-SM-D3L8Z 1 B1 2 pieces, 1 with 5% fat; other with 40% fat and fibrous content 8.3 Muscle Muscle - Skeletal 0011907 625 1171 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992821 567711 0.983731 0.994769 0.870527 21619 1 76 0.00266933 376 0 1.29166e+08 0.0160434 1.5848e+06 1.29845e+08 1.34107e+07 21638 6.43315e+07 0 0.113204 0.994769 0.865973 1.29166e+08 0.00375661 2.79568e+07 1.57542e+07 2.84372e+07 333 2.84995e+07 2.56706e+07 0.00321191 2.81163e+07 49.6616 0.0122053 0.996717 0 50.426 GTEX-1KAFJ-2426-SM-D4P32 1 B1 2 pieces. 1 all fat, other with 50% vascular and fibrous content 7 Adipose Tissue Adipose - Subcutaneous 0002190 632 1164 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993642 250439 0.975132 0.994884 0.813126 23557 1 76 0.00271919 211 0 9.42878e+07 0.0245176 995537 9.47726e+07 1.22165e+07 23589 4.69804e+07 0 0.162007 0.994884 0.808966 9.42878e+07 0.0036014 2.04654e+07 9.64914e+06 2.07847e+07 249 2.07452e+07 1.59019e+07 0.00315974 2.06147e+07 49.8422 0.0105045 0.996126 0 50.387 GTEX-1KANA-0003-SM-DE1N5 B1 Blood Whole Blood 0013756 -183 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10231,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1KANA-0003-SM-DJWY3 B1 Blood Whole Blood 0013756 -183 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KANA-0006-SM-9YFLB B1 8.1 Blood Whole Blood 0013756 -183 BP-61834 RNA isolation_PAXgene Blood RNA (Manual) 03/20/2015 LCSET-7536 08/08/2015 TruSeq.v1 RNASEQ 0.973092 500099 0.973697 0.974394 0.805431 18338 1 76 0.00236414 152 0 1.0661e+08 0.0259016 280685 1.09412e+08 3.98886e+06 18348 5.31139e+07 0 0.168266 0.974394 0.784807 1.0661e+08 0.00362673 2.46347e+07 1.37974e+08 2.47884e+07 188 2.48607e+07 2.7355e+07 0.00299459 2.47131e+07 49.8511 0.0025654 0.975696 0 50.1556 GTEX-1KANA-0226-SM-DIPF8 0 B1 2 pieces; well trimmed with scant attached fat 7.2 Nerve Nerve - Tibial 0001323 111 479 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99376 390003 0.971084 0.994839 0.791654 23699 1 76 0.00219524 289 0 9.538e+07 0.0286348 580138 9.58748e+07 7.5964e+06 23740 4.75336e+07 0 0.17943 0.994839 0.787568 9.538e+07 0.00299419 2.10409e+07 7.5835e+06 2.1174e+07 262 2.11513e+07 1.57461e+07 0.00259428 2.11618e+07 50.0123 0.00605099 0.995917 0 50.1577 GTEX-1KANA-0326-SM-CXKY8 1 B1 2 pieces; well trimmed, widely patent with focal intimal thickening 7.7 Blood Vessel Artery - Tibial 0007610 112 478 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.986718 309301 0.979519 0.98924 0.874504 20934 1 76 0.00713457 149 0 7.87842e+07 0.0200219 388413 7.96411e+07 1.38979e+07 20941 3.91496e+07 0 0.105015 0.98924 0.865094 7.87842e+07 0.0112937 1.69177e+07 6.47059e+06 1.70298e+07 155 1.70138e+07 1.70348e+07 0.00920882 1.71257e+07 50.1639 0.00487704 0.991761 0 50.1651 GTEX-1KANA-0426-SM-CXZKH 1 B1 6 pieces; target muscularis 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 120 470 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994101 227998 0.977466 0.995399 0.844569 21898 1 76 0.00179313 378 0 1.0453e+08 0.0222296 1.3699e+06 1.05013e+08 5.79754e+06 21911 5.21058e+07 0 0.132898 0.995399 0.840683 1.0453e+08 0.00278654 2.26055e+07 8.41861e+06 2.30331e+07 342 2.29546e+07 1.74623e+07 0.00228919 2.28085e+07 49.8404 0.013045 0.996696 0 50.4684 GTEX-1KANA-0526-SM-DIPF9 1 B1 6 pieces; target muscularis 8 Esophagus Esophagus - Muscularis 0004648 121 469 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.994173 466165 0.976959 0.995347 0.847228 22477 1 76 0.00204638 381 0 1.03416e+08 0.0227454 1.29718e+06 1.03899e+08 7.47413e+06 22500 5.15461e+07 0 0.129731 0.995347 0.843286 1.03416e+08 0.00308479 2.24133e+07 8.99423e+06 2.26388e+07 344 2.25881e+07 1.81532e+07 0.00256498 2.25758e+07 49.9864 0.012485 0.996522 0 50.2503 GTEX-1KANA-0626-SM-D4P3I 1 B1 6 pieces; predominantly mucosa, muscularis mucosae, submucosa, with few submucosal glands and rare portion of muscularis propria, some squamous hyperplasia suggestive of reflux 6.2 Esophagus Esophagus - Mucosa 0006920 125 465 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993234 507321 0.976761 0.994581 0.839043 23129 1 76 0.00264423 390 0 1.37345e+08 0.0228901 1.12399e+06 1.38093e+08 1.69035e+07 23151 6.84482e+07 0 0.137718 0.994581 0.834496 1.37345e+08 0.00358368 3.07481e+07 2.20505e+07 3.11883e+07 343 3.11617e+07 2.77816e+07 0.00311332 3.0945e+07 49.8256 0.00813935 0.995928 0 50.3554 GTEX-1KANA-0726-SM-D3L9I 0 B1 6 pieces; well trimmed, epidermis measures about 34 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 127 463 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990855 357869 0.968751 0.992938 0.789008 23333 1 76 0.00263152 201 0 7.83065e+07 0.0310621 651284 7.88635e+07 8.46293e+06 23358 3.89739e+07 0 0.179743 0.992938 0.783435 7.83065e+07 0.00364926 1.6993e+07 8.94128e+06 1.7188e+07 187 1.71757e+07 1.24598e+07 0.00313932 1.71607e+07 49.9782 0.00825837 0.995021 0 50.2852 GTEX-1KANA-0826-SM-D3L9J 0 B1 2 pieces; mature fat 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 129 461 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992247 337585 0.975339 0.994323 0.833278 21836 1 76 0.00248526 213 0 8.41532e+07 0.0243928 1.10024e+06 8.46337e+07 8.24766e+06 21857 4.19035e+07 0 0.142062 0.994323 0.828547 8.41532e+07 0.00376345 1.84991e+07 7.88971e+06 1.87208e+07 225 1.86865e+07 1.34945e+07 0.00312302 1.86949e+07 50.0113 0.0130001 0.996398 0 50.2978 GTEX-1KANA-0926-SM-D3L9K 0 B1 2 pieces; skeletal muscle with up to ~5-10% internal fat, small portion of tendon 8 Muscle Muscle - Skeletal 0011907 130 460 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992568 412606 0.98473 0.994742 0.884536 19728 1 76 0.00233548 374 0 1.064e+08 0.0150459 2.62583e+06 1.06963e+08 1.07139e+07 19736 5.29884e+07 0 0.100194 0.994742 0.879885 1.064e+08 0.00353716 2.34464e+07 1.34556e+07 2.39003e+07 337 2.38116e+07 1.86032e+07 0.00293501 2.37235e+07 49.9074 0.0245491 0.996915 0 50.4794 GTEX-1KANA-1026-SM-D3L9L 1 B1 2 pieces; admixture of glands and stroma 8.2 Prostate Prostate 0002367 131 459 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992191 382472 0.967365 0.993989 0.787882 25475 1 76 0.00258286 275 0 1.04455e+08 0.0323054 722390 1.05087e+08 1.0111e+07 25518 5.20201e+07 0 0.179483 0.993989 0.783146 1.04455e+08 0.00337903 2.28965e+07 1.01103e+07 2.31475e+07 307 2.31532e+07 1.5839e+07 0.00298023 2.30634e+07 49.9029 0.00687421 0.995787 0 50.2726 GTEX-1KANA-1126-SM-D3L9M 1 B1 6 pieces; full thickness with edema and focal chronic inflammation 7.9 Stomach Stomach 0000945 133 457 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989121 388812 0.980883 0.991331 0.853532 23583 1 76 0.00248688 427 0 1.28186e+08 0.0186552 1.84902e+06 1.29306e+08 1.2836e+07 23612 6.38114e+07 0 0.12735 0.991331 0.846133 1.28186e+08 0.00377964 2.90467e+07 6.84484e+07 2.93452e+07 386 2.93791e+07 2.59494e+07 0.00313182 2.92687e+07 49.9059 0.0142995 0.993541 0 50.2556 GTEX-1KANA-1226-SM-DHXKE 1 B1 2 pieces 5.8 Spleen Spleen 0002106 134 456 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992763 339729 0.967784 0.993693 0.813273 23879 1 76 0.00254281 273 0 9.53506e+07 0.0316124 677360 9.59557e+07 5.38309e+06 23911 4.75028e+07 0 0.154512 0.993693 0.808144 9.53506e+07 0.00276833 2.0944e+07 1.21037e+07 2.13156e+07 304 2.12524e+07 1.48184e+07 0.00265547 2.10845e+07 49.8017 0.00705909 0.994624 0 50.4397 GTEX-1KANA-1326-SM-DIPFA 1 B1 6 pieces; predominantly well trimmed with only small attachments of residual fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 135 455 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.961355 670425 0.958883 0.962632 0.784059 24158 1 76 0.00268191 222 0 9.13252e+07 0.0408665 916219 9.48704e+07 7.14031e+06 24184 4.54348e+07 0 0.174825 0.962632 0.75476 9.13252e+07 0.00373986 1.9852e+07 2.46834e+07 2.0096e+07 241 2.0065e+07 1.5264e+07 0.00321019 2.00008e+07 49.92 0.00965759 0.963909 0 50.3053 GTEX-1KANA-1426-SM-CY8IF 0 B1 2 pieces; mature fat 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 136 454 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.991554 279758 0.974788 0.993216 0.838779 23190 1 76 0.00440584 204 0 8.67056e+07 0.0249512 910505 8.72978e+07 9.82501e+06 23214 4.31794e+07 0 0.136009 0.993216 0.833088 8.67056e+07 0.00699142 1.91157e+07 8.68917e+06 1.92537e+07 204 1.92443e+07 1.57474e+07 0.00569646 1.92616e+07 50.0225 0.0104299 0.994877 0 50.1799 GTEX-1KANA-1526-SM-CXZKG 1 B1 2 pieces; 1 piece is ~50% fat, 2nd includes only minor proportion of fat 7.3 Pancreas Pancreas 0001150 137 453 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993705 281395 0.981453 0.995121 0.855825 22138 1 76 0.00196046 200 0 1.20773e+08 0.0181544 498966 1.21365e+08 6.89503e+06 22154 6.0194e+07 0 0.125628 0.995121 0.85165 1.20773e+08 0.0030222 2.78179e+07 3.14846e+07 2.83619e+07 223 2.83085e+07 3.60407e+07 0.00249058 2.80373e+07 49.7593 0.00411127 0.996538 0 50.4842 GTEX-1KANA-1626-SM-CXZL2 1 B1 2 pieces; active spermatogenesis 7.8 Testis Testis 0000473 138 452 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992849 187384 0.932262 0.993993 0.733463 30579 1 76 0.00199623 113 0 5.17755e+07 0.0674496 626719 5.20883e+07 3.20844e+06 30619 2.58091e+07 0 0.198799 0.993993 0.729057 5.17755e+07 0.00250916 1.08501e+07 6.16942e+06 1.09872e+07 107 1.10108e+07 8.70853e+06 0.0022524 1.08769e+07 49.6941 0.0120318 0.995137 0 50.3138 GTEX-1KANA-1726-SM-CY8IG 0 B1 6 pieces; target muscularis 7.8 Colon Colon - Sigmoid 0001159 140 450 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990891 390336 0.974346 0.992844 0.827407 22191 1 76 0.00440483 170 0 7.9304e+07 0.0254071 848559 7.98755e+07 9.02065e+06 22208 3.94696e+07 0 0.146939 0.992844 0.821486 7.9304e+07 0.00745913 1.72336e+07 6.83576e+06 1.73522e+07 184 1.73597e+07 1.25705e+07 0.00592898 1.73684e+07 50.0125 0.0106235 0.994797 0 50.1716 GTEX-1KANA-1926-SM-DHXKF 1 B1 6 pieces; full thickness sections, focal serositis 7.9 Colon Colon - Transverse 0001157 143 447 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993114 447790 0.975905 0.994181 0.818752 24338 1 76 0.00225598 297 0 1.11277e+08 0.0236593 1.75427e+06 1.11928e+08 5.8796e+06 24378 5.54478e+07 0 0.157153 0.994181 0.813987 1.11277e+08 0.00271703 2.46482e+07 1.41346e+07 2.50407e+07 322 2.49671e+07 1.73723e+07 0.00248626 2.48304e+07 49.8627 0.0156732 0.995247 0 50.395 GTEX-1KANA-2026-SM-DIPFB 1 B1 2 pieces; fat and fibrocollagenous stroma, 1 piece includes scattered ducts 8.2 Breast Breast - Mammary Tissue 0008367 146 444 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993987 399672 0.969616 0.994984 0.796918 25337 1 76 0.00212508 283 0 1.09175e+08 0.030053 692886 1.09725e+08 7.93709e+06 25378 5.44297e+07 0 0.172698 0.994984 0.79292 1.09175e+08 0.00282907 2.40342e+07 1.04733e+07 2.42008e+07 319 2.41954e+07 1.98382e+07 0.00247673 2.4142e+07 49.9447 0.00631472 0.99598 0 50.1727 GTEX-1KANB-0003-SM-DE1KX B1 Blood Whole Blood 0013756 578 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KANB-0003-SM-DJWWC B1 Blood Whole Blood 0013756 578 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KANB-0006-SM-DIPE6 B1 8.9 Blood Whole Blood 0013756 577 BP-61834 RNA isolation_PAXgene Blood RNA (Manual) 03/20/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992044 599828 0.975116 0.9933 0.775769 21795 1 76 0.00279723 170 0 1.04712e+08 0.0241293 330907 1.05418e+08 8.05157e+06 21830 5.21233e+07 0 0.199347 0.9933 0.770571 1.04712e+08 0.00384348 2.36552e+07 5.77667e+07 2.36898e+07 193 2.37805e+07 2.26831e+07 0.00331969 2.36998e+07 49.9151 0.00313899 0.994556 0 50.0365 GTEX-1KANB-0011-R9b-SM-EZ6MO B1, A1 5.9 Brain Brain - Spinal cord (cervical c-1) 0006469 541 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987251 266257 0.961334 0.9888 0.837618 22831 1 76 0.00308819 301 0 9.93284e+07 0.0384326 6.22557e+06 1.00453e+08 6.90604e+06 22856 4.94959e+07 0 0.123716 0.9888 0.828236 9.93284e+07 0.00462895 2.18721e+07 1.11107e+07 2.21936e+07 328 2.19172e+07 1.13691e+07 0.00385736 2.22872e+07 50.4184 0.0619747 0.990349 0 50.3648 GTEX-1KANB-0126-SM-E6CJT 0 B1 2 pieces, ~15% interstitial fat/vascular elements, rep delineated 7.4 Muscle Muscle - Skeletal 0011907 746 966 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994268 494287 0.978876 0.995509 0.850272 23077 1 76 0.0022907 273 0 1.06939e+08 0.0208172 991886 1.07421e+08 6.55404e+06 23101 5.32704e+07 0 0.128604 0.995509 0.846454 1.06939e+08 0.00281966 2.23983e+07 9.22545e+06 2.26608e+07 306 2.25e+07 2.26366e+07 0.00255485 2.26726e+07 50.1911 0.0092336 0.996751 0 50.2912 GTEX-1KANB-0326-SM-D4P3H 0 B1 2 pieces, peripheral nerve, trace adherent fat, delineated. 7 Nerve Nerve - Tibial 0001323 748 964 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992056 312768 0.964532 0.9937 0.717815 25971 1 76 0.00282344 286 0 1.13448e+08 0.0351633 342435 1.14168e+08 1.40188e+07 26036 5.649e+07 0 0.246717 0.9937 0.713293 1.13448e+08 0.00431483 2.48222e+07 1.0638e+07 2.50565e+07 289 2.50699e+07 1.70528e+07 0.0035679 2.49824e+07 49.9126 0.00299941 0.995344 0 50.2349 GTEX-1KANB-0526-SM-E6CJH 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40-45 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 755 957 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993577 199248 0.971787 0.994667 0.78027 24664 1 76 0.00221918 253 0 9.15452e+07 0.0279599 420265 9.2036e+07 5.03238e+06 24699 4.56151e+07 0 0.191517 0.994667 0.776109 9.15452e+07 0.0028439 1.97345e+07 9.06362e+06 1.98611e+07 223 1.97733e+07 1.68303e+07 0.0025312 1.99086e+07 50.1706 0.00456631 0.995758 0 50.1598 GTEX-1KANB-1026-SM-D3L9F 1 B1 2 pieces, mild chronic congestion 7.3 Lung Lung 0008952 765 947 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989062 272369 0.96995 0.991284 0.692804 25589 1 76 0.00328549 165 0 8.95956e+07 0.0297355 696659 9.03833e+07 9.53696e+06 25644 4.45528e+07 0 0.277147 0.991284 0.686765 8.95956e+07 0.00461988 1.96919e+07 9.02176e+06 1.98621e+07 186 1.98623e+07 1.10888e+07 0.00395119 1.988e+07 50.0222 0.00770783 0.993506 0 50.2152 GTEX-1KANB-1126-SM-DHXJT 1 B1 2 pieces, no abnormalities 6.7 Heart Heart - Atrial Appendage 0006631 764 948 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993594 370995 0.980176 0.994443 0.826646 22966 1 76 0.00350069 268 0 1.13838e+08 0.0196437 4.18003e+06 1.14474e+08 6.46582e+06 22993 5.67489e+07 0 0.153531 0.994443 0.822052 1.13838e+08 0.00374588 2.48551e+07 1.5279e+07 2.52618e+07 316 2.52806e+07 1.50197e+07 0.00362318 2.49229e+07 49.6438 0.036515 0.995292 0 50.4057 GTEX-1KANB-1526-SM-CXZK4 3 B1 6 pieces, target muscosa up to ~0.6mm, ~5-10% of thickness, glandular elements totally autolyzed 6.2 Colon Colon - Transverse 0001157 786 926 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991421 168812 0.968411 0.992452 0.805034 24361 1 76 0.00325094 197 0 8.72654e+07 0.0283656 637254 8.79291e+07 5.79388e+06 24383 4.33387e+07 0 0.163376 0.992452 0.798958 8.72654e+07 0.00391802 1.87759e+07 1.02641e+07 1.90895e+07 215 1.90483e+07 1.35707e+07 0.00358413 1.89064e+07 49.8131 0.00724736 0.993483 0 50.4141 GTEX-1KANB-1626-SM-CY8I5 1 B1 6 pieces, confirmed target muscularis 6.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 793 919 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989767 304955 0.974063 0.991669 0.752402 23540 1 76 0.00502654 143 0 7.93296e+07 0.0256517 929516 7.9996e+07 8.415e+06 23575 3.94582e+07 0 0.221661 0.991669 0.746134 7.93296e+07 0.00795457 1.72162e+07 7.03611e+06 1.73222e+07 157 1.73088e+07 1.12876e+07 0.00648775 1.73734e+07 50.0932 0.0116195 0.993572 0 50.1534 GTEX-1KANB-1826-SM-DHXJU 1 B1 6 pieces, squamous mucosa up to ~0.2 mm; abundant submucosal mucus glands, rep delineated 8.7 Esophagus Esophagus - Mucosa 0006920 792 920 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992766 535454 0.982289 0.993609 0.806604 21699 1 76 0.00258161 285 0 1.05058e+08 0.017359 725197 1.05734e+08 5.80285e+06 21725 5.2351e+07 0 0.175684 0.993609 0.801449 1.05058e+08 0.00305547 2.39302e+07 1.39769e+07 2.41727e+07 288 2.41966e+07 2.05698e+07 0.00281834 2.39929e+07 49.7886 0.00685869 0.994451 0 50.2521 GTEX-1KANB-1926-SM-D3L9H 1 B1 6 pieces, confirmed target muscularis 7.3 Esophagus Esophagus - Muscularis 0004648 792 920 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991013 348053 0.969382 0.992957 0.766978 23579 1 76 0.00316541 168 0 8.29734e+07 0.0303907 793026 8.35619e+07 8.14711e+06 23612 4.1284e+07 0 0.202404 0.992957 0.761576 8.29734e+07 0.00416868 1.77075e+07 7.75096e+06 1.7906e+07 193 1.78733e+07 1.13759e+07 0.00366606 1.78947e+07 50.0298 0.00949028 0.994901 0 50.2785 GTEX-1KANB-2026-SM-DIPEY 1 B1 2 pieces, prominent intraglandular calcospherules, encircled; glands with urothelial metaplasia ensquared 6.3 Prostate Prostate 0002367 802 910 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99145 405781 0.959257 0.99278 0.720915 26276 1 76 0.00273919 197 0 9.35033e+07 0.0405104 811174 9.41832e+07 7.67544e+06 26324 4.65668e+07 0 0.238342 0.99278 0.71571 9.35033e+07 0.00361085 2.04113e+07 1.18639e+07 2.05805e+07 206 2.05802e+07 1.33004e+07 0.00317444 2.05376e+07 49.9483 0.00861272 0.99411 0 50.2064 GTEX-1KANB-2126-SM-DHXJV 2 B1 2 pieces, spermatogenesis appears reduced 6 Testis Testis 0000473 805 907 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991133 523001 0.916187 0.991991 0.703193 33565 1 76 0.00259773 181 0 8.67352e+07 0.0834744 910308 8.74354e+07 4.64152e+06 33643 4.32127e+07 0 0.212994 0.991991 0.697561 8.67352e+07 0.00300595 1.74697e+07 1.30285e+07 1.76721e+07 170 1.77061e+07 1.34613e+07 0.00280166 1.75003e+07 49.7077 0.0104112 0.99285 0 50.288 GTEX-1KANB-2226-SM-DHXJW 1 B1 2 pieces, mild congestion 6.7 Liver Liver 0001114 808 904 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994946 260980 0.969232 0.995592 0.737945 22132 1 76 0.00326444 128 0 8.07244e+07 0.0306279 951931 8.10818e+07 4.27205e+06 22163 4.02416e+07 0 0.231287 0.995592 0.734692 8.07244e+07 0.00342656 1.74334e+07 1.0527e+07 1.77964e+07 163 1.7682e+07 1.11145e+07 0.00334545 1.75913e+07 49.8715 0.0117404 0.996238 0 50.5151 GTEX-1KANB-2426-SM-EV7BE 1 B1 2 pieces, ~40% fascia/mesothelial hyperplasia and vascular elements 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 811 901 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.985162 280084 0.970911 0.986661 0.752903 24283 1 76 0.00304426 154 0 7.68696e+07 0.0288142 1.13596e+06 7.79089e+07 8.45766e+06 24311 3.82386e+07 0 0.218009 0.986661 0.74286 7.68696e+07 0.00493213 1.68554e+07 8.18742e+06 1.70723e+07 172 1.70171e+07 1.05747e+07 0.00398676 1.70216e+07 50.0067 0.0145807 0.988161 0 50.3197 GTEX-1KANB-2626-SM-EV7BF 3 B1 2 pieces, cortex, advanced autolysis 6.1 Adrenal Gland Adrenal Gland 0002369 820 892 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988199 261239 0.967364 0.989431 0.742247 24669 1 76 0.00341989 268 0 1.00475e+08 0.0324354 4.08818e+06 1.01549e+08 1.14579e+07 24716 5.00566e+07 0 0.225117 0.989431 0.734402 1.00475e+08 0.00468757 2.16776e+07 1.44906e+07 2.19498e+07 295 2.19598e+07 9.45921e+06 0.00405294 2.17814e+07 49.7961 0.0402583 0.990663 0 50.312 GTEX-1KANB-2826-SM-CY8I6 0 B1 6 pieces, minimal dermal fat; prominent adnexal glands noted (apocrine and eccrine), encircled. Squamous epithelium is ~40-45 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 833 879 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99 289321 0.972044 0.991973 0.783808 23444 1 76 0.00510487 160 0 7.2351e+07 0.0276925 360231 7.29365e+07 9.07686e+06 23476 3.59945e+07 0 0.188237 0.991973 0.777516 7.2351e+07 0.00774447 1.56225e+07 8.75866e+06 1.56983e+07 147 1.57184e+07 1.26639e+07 0.00642205 1.57429e+07 50.0389 0.00493897 0.993945 0 50.121 GTEX-1KANB-3126-SM-D3L9G 1 B1 1 piece, adenohypophysis, adherent dura up to ~1mm 7.8 Pituitary Pituitary 0000007 890 822 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989221 937248 0.958882 0.991485 0.706049 27849 1 76 0.00298998 273 0 1.18389e+08 0.0408123 395250 1.19406e+08 1.20024e+07 27927 5.8877e+07 0 0.252833 0.991485 0.700037 1.18389e+08 0.00415124 2.47967e+07 1.2827e+07 2.49837e+07 298 2.50982e+07 1.7891e+07 0.00356928 2.49257e+07 49.8276 0.00331014 0.99375 0 50.1878 GTEX-1KANB-3226-SM-D4P3G 1 B1 2 pieces, no abnormalities 6.3 Brain Brain - Cerebellum 0002037 892 820 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99264 325928 0.958201 0.994158 0.785958 23665 1 76 0.00407004 370 0 1.0565e+08 0.0416334 6.64037e+06 1.06271e+08 1.28228e+07 23696 5.26239e+07 0 0.172243 0.994158 0.781366 1.0565e+08 0.00548211 2.25148e+07 2.25819e+07 2.31334e+07 355 2.30464e+07 7.11992e+06 0.004775 2.27364e+07 49.6614 0.0624853 0.995675 0 50.6775 GTEX-1KANC-0004-SM-DE1KF B1 Blood Whole Blood 0013756 -77 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KANC-0004-SM-DJWYC B1 Blood Whole Blood 0013756 -77 BP-61830 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/20/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KANC-0006-SM-9YFL8 B1 8.1 Blood Whole Blood 0013756 -77 BP-61834 RNA isolation_PAXgene Blood RNA (Manual) 03/20/2015 LCSET-7536,LCSET-7767 08/22/2015 TruSeq.v1 RNASEQ 0.969481 937284 0.959259 0.971593 0.792685 19561 1 76 0.00331786 193 0 1.22734e+08 0.0393884 323025 1.26322e+08 1.59565e+07 19579 6.1044e+07 0 0.166575 0.971593 0.770167 1.22734e+08 0.0052119 2.77113e+07 1.53738e+08 2.78062e+07 216 2.77885e+07 2.82152e+07 0.00426282 2.8003e+07 50.1922 0.00255716 0.973704 0 50.0854 GTEX-1KANC-0226-SM-E9TIW 1 B1 2 pieces; 1 mostly muscle, other with 40% subendothelial and subpericardial fibrous content 8 Heart Heart - Atrial Appendage 0006631 209 1330 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988746 344024 0.986076 0.990669 0.840075 21230 1 76 0.00327813 370 0 1.13126e+08 0.0136316 3.31042e+06 1.14191e+08 4.8069e+06 21247 5.63221e+07 0 0.146001 0.990669 0.832236 1.13126e+08 0.00388256 2.34564e+07 3.14042e+07 2.40825e+07 351 2.38296e+07 1.46605e+07 0.00357976 2.38594e+07 50.0313 0.0289902 0.992592 0 50.6585 GTEX-1KANC-0326-SM-D3LA7 1 B1 6 pieces; mild plaque formation 7.5 Blood Vessel Artery - Aorta 0001496 212 1327 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.993264 235307 0.972856 0.99493 0.819983 23172 1 76 0.00258745 280 0 9.85529e+07 0.0267246 267569 9.90552e+07 8.44189e+06 23206 4.909e+07 0 0.152872 0.99493 0.815825 9.85529e+07 0.00375432 2.10635e+07 7.42135e+06 2.12336e+07 266 2.12199e+07 1.8463e+07 0.00316991 2.12268e+07 50.0081 0.00270121 0.996596 0 50.201 GTEX-1KANC-0426-SM-CXZK5 1 B1 2 pieces; some enlarged nuclei, but no old or recent lesions 8.5 Heart Heart - Left Ventricle 0006566 212 1327 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.995103 281693 0.984397 0.9963 0.868064 21252 1 76 0.00278749 270 0 1.32382e+08 0.0153014 2.91061e+06 1.32873e+08 8.00661e+06 21272 6.6012e+07 0 0.116333 0.9963 0.864852 1.32382e+08 0.00357932 2.81802e+07 2.01411e+07 2.90405e+07 330 2.89223e+07 2.17686e+07 0.00318293 2.8412e+07 49.5549 0.0219052 0.997496 0 50.7517 GTEX-1KANC-0526-SM-D4P3T 1 B1 2 pieces; <1% fibrous content 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 216 1323 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993547 1.62893e+06 0.925316 0.994686 0.772041 23864 1 76 0.00272789 277 0 1.07192e+08 0.074262 842679 1.07764e+08 1.30323e+07 23894 5.34408e+07 0 0.153275 0.994686 0.767939 1.07192e+08 0.00371718 2.20246e+07 6.99498e+07 2.26194e+07 313 2.25549e+07 1.62884e+07 0.00322196 2.22295e+07 49.6367 0.00781964 0.995825 0 50.6661 GTEX-1KANC-0826-SM-D3LA8 1 B1 2 pieces; 1 mm focus of skeletal muscle on 1 edge 8.5 Thyroid Thyroid 0002046 223 1316 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.9919 416414 0.969248 0.99393 0.775772 24607 1 76 0.00281242 278 0 1.11355e+08 0.0304426 264516 1.12035e+08 1.18744e+07 24658 5.54525e+07 0 0.193476 0.99393 0.771063 1.11355e+08 0.00360917 2.42822e+07 1.2271e+07 2.44841e+07 283 2.45432e+07 2.05854e+07 0.00320998 2.44263e+07 49.8806 0.00236102 0.99596 0 50.207 GTEX-1KANC-0926-SM-D3LA9 1 B1 6 pieces; full thickness with some pericolonic fat on 3 pieces 7.6 Colon Colon - Transverse 0001157 224 1315 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991168 339715 0.972926 0.993145 0.805092 24864 1 76 0.00335826 388 0 1.26187e+08 0.0264271 2.20976e+06 1.27058e+08 1.20979e+07 24910 6.2822e+07 0 0.167834 0.993145 0.799573 1.26187e+08 0.00451416 2.75708e+07 1.63097e+07 2.79022e+07 332 2.78771e+07 1.81769e+07 0.00393506 2.78062e+07 49.9363 0.0173917 0.995121 0 50.2987 GTEX-1KANC-1026-SM-D3LAA 1 B1 2 pieces; large corpora albicantia occupy 50% are in 1 piece 7.9 Ovary Ovary 0000992 227 1312 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.99246 300156 0.965427 0.994212 0.744565 25150 1 76 0.00278521 280 0 1.08548e+08 0.034284 268624 1.0918e+08 1.07362e+07 25208 5.40668e+07 0 0.220862 0.994212 0.740256 1.08548e+08 0.00361879 2.37033e+07 1.0746e+07 2.39202e+07 287 2.39412e+07 1.83828e+07 0.00320127 2.38584e+07 49.9134 0.00246037 0.995965 0 50.2276 GTEX-1KANC-1126-SM-CY8I7 1 B1 2 pieces; all myometrium in these cuts, no endometrium 8 Uterus Uterus 0000995 229 1310 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99158 287335 0.970989 0.993278 0.80256 23373 1 76 0.00465439 168 0 8.25029e+07 0.0286596 227359 8.30612e+07 9.31517e+06 23404 4.10737e+07 0 0.168429 0.993278 0.797166 8.25029e+07 0.00740351 1.78646e+07 6.51943e+06 1.79307e+07 166 1.79355e+07 1.51207e+07 0.0060266 1.79906e+07 50.0767 0.00273725 0.994976 0 50.0924 GTEX-1KANC-1226-SM-CYPT7 1 B1 6 pieces; well trimmed; <5% dermal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 230 1309 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995388 184427 0.970779 0.99599 0.809217 23793 1 76 0.00257526 176 0 7.38603e+07 0.029006 699827 7.41576e+07 5.45548e+06 23816 3.68436e+07 0 0.161561 0.99599 0.805972 7.38603e+07 0.00286888 1.60888e+07 6.72482e+06 1.62257e+07 174 1.61613e+07 1.25389e+07 0.00272198 1.61966e+07 50.0545 0.00943702 0.996592 0 50.212 GTEX-1KANC-1326-SM-CYPT8 1 B1 1 piece; well trimmed, 20% internal fat; small foci of atrophy & fibrosis 6.9 Salivary Gland Minor Salivary Gland 0006330 232 1307 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994924 154742 0.980945 0.995754 0.883425 21397 1 76 0.00249484 212 0 6.13361e+07 0.0186386 247146 6.15977e+07 4.68165e+06 21407 3.05806e+07 0 0.0975193 0.995754 0.879674 6.13361e+07 0.00310007 1.37613e+07 8.84082e+06 1.38831e+07 160 1.3849e+07 1.32965e+07 0.0027972 1.38501e+07 50.002 0.00401226 0.996584 0 50.2204 GTEX-1KANC-1426-SM-CYPT9 1 B1 2 pieces; fibroadipose tissue with a few atrophic ducts 6.6 Breast Breast - Mammary Tissue 0008367 233 1306 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.996329 133621 0.97418 0.996884 0.827418 22353 1 76 0.0024053 165 0 7.31479e+07 0.0255612 589926 7.33765e+07 4.72576e+06 22375 3.64947e+07 0 0.146761 0.996884 0.82484 7.31479e+07 0.00292681 1.58928e+07 6.21832e+06 1.59871e+07 188 1.5895e+07 1.16429e+07 0.00266591 1.60218e+07 50.1986 0.00803971 0.997439 0 50.1479 GTEX-1KANC-1526-SM-D3LAB 1 B1 6 pieces; well trimmed, minimal dermal fat; few sweat glands 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 323 1216 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991509 347739 0.975272 0.993607 0.840287 22744 1 76 0.00289167 285 0 9.00558e+07 0.0244551 391294 9.06352e+07 9.45529e+06 22769 4.4837e+07 0 0.134985 0.993607 0.834915 9.00558e+07 0.00411875 1.92269e+07 1.1385e+07 1.93775e+07 224 1.93917e+07 1.70848e+07 0.00350391 1.93895e+07 49.9972 0.00431724 0.995706 0 50.195 GTEX-1KANC-1626-SM-E6CIA 1 B1 2 pieces; <5% internal fat 8.4 Muscle Muscle - Skeletal 0011907 328 1211 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.995038 311523 0.984888 0.996362 0.888152 19484 1 76 0.00204123 282 0 9.67754e+07 0.0148275 669435 9.71287e+07 6.05615e+06 19492 4.82322e+07 0 0.0967365 0.996362 0.884921 9.67754e+07 0.00255523 2.07256e+07 8.8553e+06 2.09376e+07 276 2.09086e+07 2.19277e+07 0.00229789 2.08603e+07 49.9422 0.00689225 0.997687 0 50.2543 GTEX-1KANC-1726-SM-E6CIB 1 B1 2 pieces; well trimmed; minimal intimal thickening 8 Blood Vessel Artery - Tibial 0007610 338 1201 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993906 378495 0.974342 0.994967 0.840326 21175 1 76 0.00202308 215 0 9.03822e+07 0.0251702 232528 9.08394e+07 5.53294e+06 21197 4.50095e+07 0 0.134017 0.994967 0.836097 9.03822e+07 0.00255787 1.926e+07 6.0222e+06 1.93803e+07 235 1.93171e+07 1.85405e+07 0.00229019 1.94058e+07 50.1145 0.00255977 0.996029 0 50.1556 GTEX-1KANC-1826-SM-CYPTA 1 B1 2 pieces; well trimmed; <1% internal fat 6.1 Nerve Nerve - Tibial 0001323 342 1197 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994762 148910 0.968699 0.99539 0.76769 22693 1 76 0.00250226 143 0 6.25714e+07 0.0310442 279778 6.28612e+07 4.45123e+06 22719 3.11939e+07 0 0.201009 0.99539 0.764151 6.25714e+07 0.00297823 1.36905e+07 5.00915e+06 1.37727e+07 149 1.37124e+07 9.52358e+06 0.00274009 1.37897e+07 50.1405 0.00445073 0.996018 0 50.1495 GTEX-1KD4Q-0002-SM-DE1NB B1 Blood Whole Blood 0013756 704 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KD4Q-0002-SM-DJWYV B1 Blood Whole Blood 0013756 704 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KD4Q-0006-SM-DIPEA B1 7.9 Blood Whole Blood 0013756 704 BP-62000 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.945439 243845 0.992804 0.946594 0.814641 16547 1 76 0.00186997 136 0 1.16554e+08 0.00608181 108736 1.2313e+08 9.68448e+06 16548 5.79955e+07 0 0.178163 0.946594 0.771134 1.16554e+08 0.00299361 2.84492e+07 2.38587e+08 2.85159e+07 188 2.85205e+07 3.69155e+07 0.00243111 2.85934e+07 50.0639 0.000883099 0.947749 0 50.0585 GTEX-1KD4Q-0011-R11b-SM-EXOIE B1, A1 7.6 Brain Brain - Cerebellar Hemisphere 0002037 706 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989798 489286 0.951382 0.991825 0.768034 24463 1 76 0.00212581 273 0 1.16745e+08 0.0481806 1.9265e+06 1.17708e+08 6.46652e+06 24500 5.80932e+07 0 0.183348 0.991825 0.761755 1.16745e+08 0.0032857 2.522e+07 1.34928e+07 2.53942e+07 313 2.54419e+07 1.49089e+07 0.00270457 2.53811e+07 49.9402 0.0163669 0.993851 0 50.1721 GTEX-1KD4Q-0011-R3b-SM-EXOID B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 706 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.986465 297243 0.970982 0.988919 0.868211 22508 1 76 0.00190842 371 0 8.68691e+07 0.0288152 8.07443e+06 8.78425e+07 5.27145e+06 22522 4.32216e+07 0 0.102771 0.988919 0.85859 8.68691e+07 0.00322102 1.9129e+07 1.21892e+07 1.96171e+07 353 1.9444e+07 7.2136e+06 0.00256309 1.94721e+07 50.0362 0.0919194 0.991373 0 50.6299 GTEX-1KD4Q-0226-SM-E9TJ9 1 B1 6 pieces; up to 20% dermal fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 818 885 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.984818 409802 0.97721 0.986571 0.834739 23437 1 76 0.00201504 225 0 8.68597e+07 0.0224536 352712 8.80421e+07 3.8595e+06 23467 4.32275e+07 0 0.142472 0.986571 0.823529 8.68597e+07 0.00259711 1.89003e+07 9.18071e+06 1.89868e+07 212 1.9026e+07 1.74232e+07 0.00230556 1.90081e+07 49.9765 0.00400618 0.988324 0 50.1142 GTEX-1KD4Q-0326-SM-E9TJA 1 B1 2 pieces; 10% internal fat in 1 piece 8.2 Muscle Muscle - Skeletal 0011907 829 874 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.989506 573991 0.984784 0.991598 0.879346 20195 1 76 0.00169061 204 0 9.15709e+07 0.0149032 981539 9.23468e+07 3.86607e+06 20206 4.55742e+07 0 0.105438 0.991598 0.871958 9.15709e+07 0.00243333 1.97171e+07 7.74423e+06 1.97806e+07 219 1.99231e+07 2.08752e+07 0.00206119 1.97426e+07 49.7725 0.0106288 0.99369 0 50.0804 GTEX-1KD4Q-0426-SM-E9TJB 1 B1 2 pieces; 10% fat content 6.3 Nerve Nerve - Tibial 0001323 837 866 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.975421 284269 0.96555 0.976935 0.759493 24436 1 76 0.00214565 208 0 8.86417e+07 0.0341229 301900 9.07345e+07 4.42804e+06 24471 4.40889e+07 0 0.206056 0.976935 0.741975 8.86417e+07 0.00271298 1.93818e+07 7.46759e+06 1.95772e+07 215 1.95416e+07 1.39426e+07 0.00242888 1.95473e+07 50.0073 0.00332729 0.978448 0 50.2507 GTEX-1KD4Q-0726-SM-DIPGE 1 B1 2 pieces; numerous artefactual 'cracked' myofibers; no active or chronic lesions 6 Heart Heart - Left Ventricle 0006566 933 770 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992708 160752 0.989635 0.99432 0.860072 18528 1 76 0.00187021 366 0 1.06749e+08 0.0103291 8.94797e+06 1.07359e+08 8.47919e+06 18531 5.32089e+07 0 0.129563 0.99432 0.855187 1.06749e+08 0.00311113 2.35192e+07 4.26839e+07 2.42451e+07 422 2.39563e+07 3.57637e+06 0.00248966 2.39285e+07 49.9711 0.0833462 0.995932 0 50.7598 GTEX-1KD4Q-0926-SM-CXZKI 2 B1 2 pieces; foci of alveolar macrophages 5.9 Lung Lung 0008952 939 764 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991787 141540 0.967116 0.993021 0.736246 23704 1 76 0.00243416 143 0 7.23374e+07 0.0326455 642391 7.28458e+07 5.39692e+06 23739 3.60203e+07 0 0.23087 0.993021 0.731108 7.23374e+07 0.00298001 1.57548e+07 9.11697e+06 1.60721e+07 172 1.60023e+07 8.8986e+06 0.00270674 1.59117e+07 49.858 0.0088185 0.994255 0 50.4985 GTEX-1KD4Q-1026-SM-CXZKJ 2 B1 2 pieces; poorly preserved follicular lining cells 6.6 Thyroid Thyroid 0002046 942 761 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993127 208059 0.966025 0.994476 0.744807 24971 1 76 0.0020108 270 0 9.75332e+07 0.0337055 332755 9.8075e+07 6.11522e+06 25025 4.86036e+07 0 0.221218 0.994476 0.740693 9.75332e+07 0.00295422 2.12437e+07 9.06863e+06 2.15241e+07 258 2.15071e+07 1.44283e+07 0.00248187 2.13904e+07 49.864 0.00339286 0.995825 0 50.3278 GTEX-1KD4Q-1126-SM-CXZKK 2 B1 6 pieces; largely desquamated squamous lining; better preserved prominent muscularis mucosae 5.9 Esophagus Esophagus - Mucosa 0006920 954 749 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994236 151239 0.973427 0.995355 0.807378 22613 1 76 0.00207655 266 0 8.21064e+07 0.0264284 1.18738e+06 8.24895e+07 5.60876e+06 22634 4.09284e+07 0 0.166048 0.995355 0.803628 8.21064e+07 0.0027463 1.82909e+07 8.83601e+06 1.88071e+07 262 1.87355e+07 9.75262e+06 0.00241105 1.84497e+07 49.6157 0.0143943 0.996475 0 50.6956 GTEX-1KD4Q-1226-SM-DIPFU 1 B1 6 pieces; well dissected generally 5.9 Esophagus Esophagus - Muscularis 0004648 953 750 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311,LCSET-10535 01/26/2017 TruSeq.v1 RNASEQ 0.992215 294791 0.972885 0.993746 0.833168 23407 1 76 0.00188512 371 0 1.23964e+08 0.0269506 4.31744e+06 1.24744e+08 7.32288e+06 23436 6.17393e+07 0 0.139717 0.993746 0.827958 1.23964e+08 0.00290653 2.72367e+07 1.35743e+07 2.74397e+07 388 2.74235e+07 1.29128e+07 0.00239504 2.74215e+07 49.9981 0.0346105 0.995277 0 50.1857 GTEX-1KD4Q-1326-SM-D4P3J 1 B1 6 pieces; well dissected muscularis 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 955 748 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992449 230564 0.972052 0.994179 0.8178 23272 1 76 0.00244549 369 0 9.52464e+07 0.0277972 2.63498e+06 9.58041e+07 1.17848e+07 23299 4.74297e+07 0 0.154252 0.994179 0.813039 9.52464e+07 0.00410714 2.07087e+07 1.03456e+07 2.11843e+07 356 2.1104e+07 1.02198e+07 0.00327487 2.09378e+07 49.8023 0.0275038 0.995909 0 50.5676 GTEX-1KD4Q-1426-SM-D4P3K 1 B1 2 pieces; minimal fibrous content 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 962 741 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992448 223518 0.974117 0.993803 0.804554 23760 1 76 0.00258015 173 0 8.16089e+07 0.0255625 279837 8.21178e+07 1.03448e+07 23788 4.0643e+07 0 0.169562 0.993803 0.799568 8.16089e+07 0.00373824 1.78627e+07 8.66254e+06 1.80825e+07 197 1.80351e+07 1.39002e+07 0.0031584 1.80176e+07 49.9757 0.00340775 0.995158 0 50.3058 GTEX-1KD4Q-1526-SM-D4P3L 2 B1 2 pieces; slight degree of congestion 5.7 Liver Liver 0001114 963 740 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991759 243627 0.969975 0.993562 0.804138 22621 1 76 0.00246696 367 0 9.37629e+07 0.0299162 3.30306e+06 9.43705e+07 1.17985e+07 22647 4.66896e+07 0 0.165837 0.993562 0.798961 9.37629e+07 0.00393361 2.03272e+07 1.5308e+07 2.1073e+07 359 2.09697e+07 8.26864e+06 0.00319895 2.05705e+07 49.5196 0.035001 0.995364 0 50.9007 GTEX-1KD4Q-1826-SM-DIPFV 2 B1 2 pieces; minimal fat content 5.9 Adrenal Gland Adrenal Gland 0002369 996 707 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992927 313808 0.974305 0.994228 0.829508 21746 1 76 0.00219549 368 0 1.04756e+08 0.0255079 1.00305e+07 1.05364e+08 7.68093e+06 21774 5.22147e+07 0 0.144798 0.994228 0.82472 1.04756e+08 0.0034549 2.28261e+07 1.68901e+07 2.32579e+07 373 2.32745e+07 7.84335e+06 0.00282437 2.29322e+07 49.6295 0.0951986 0.995529 0 50.4685 GTEX-1KD4Q-2126-SM-EV7A6 2 B1 2 pieces; active spermatogenesis, but poorly preserved 6 Testis Testis 0000473 1007 696 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990513 446777 0.922255 0.991563 0.734082 34784 1 76 0.00230577 290 0 1.22279e+08 0.0773397 1.0114e+06 1.2332e+08 1.28943e+07 34857 6.09413e+07 0 0.188173 0.991563 0.727888 1.22279e+08 0.00352288 2.49199e+07 1.78642e+07 2.51204e+07 303 2.51542e+07 2.15962e+07 0.00291368 2.49981e+07 49.8443 0.00820145 0.992613 0 50.2003 GTEX-1KD4Q-2326-SM-D4P3M 1 B1 2 pieces; fibrofatty tissue without mammary ducts 5.6 Breast Breast - Mammary Tissue 0008367 1025 678 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991545 142444 0.974818 0.993186 0.788523 25692 1 76 0.00254731 141 0 6.18721e+07 0.0248406 347106 6.22965e+07 7.78712e+06 25723 3.07969e+07 0 0.186294 0.993186 0.783151 6.18721e+07 0.00412169 1.35543e+07 6.06195e+06 1.37485e+07 148 1.37195e+07 1.0236e+07 0.0033332 1.36816e+07 49.9308 0.00557183 0.994828 0 50.3556 GTEX-1KD4Q-2526-SM-CXZKL 1 B1 2 pieces; well dissected glands with 10% internal fat 8.2 Salivary Gland Minor Salivary Gland 0006330 1020 683 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992086 314110 0.972369 0.993567 0.78036 25065 1 76 0.00223802 395 0 1.13126e+08 0.0263684 288607 1.13858e+08 7.38761e+06 25115 5.6313e+07 0 0.192009 0.993567 0.77534 1.13126e+08 0.0029165 2.54683e+07 2.26556e+07 2.60834e+07 340 2.61018e+07 1.86089e+07 0.00257675 2.56141e+07 49.5285 0.00253479 0.995048 0 50.5965 GTEX-1KD4Q-2926-SM-D3L9N 2 B1 4 pieces; 1mm external focus of debris, possible bone and tissue [labeled] 7.3 Brain Brain - Cortex 0001870 1149 554 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992482 615440 0.966387 0.994371 0.841335 24854 1 76 0.00237619 372 0 1.15258e+08 0.0332199 4.35822e+06 1.15911e+08 1.06664e+07 24880 5.7393e+07 0 0.125052 0.994371 0.836599 1.15258e+08 0.00335864 2.52697e+07 1.65599e+07 2.56678e+07 352 2.55972e+07 1.37981e+07 0.00286648 2.55238e+07 49.9282 0.0375998 0.99626 0 50.3908 GTEX-1KD4Q-3026-SM-EV7A7 2 B1 4 pieces 6.5 Brain Brain - Cerebellum 0002037 1152 551 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988227 678014 0.936255 0.989584 0.73217 24876 1 76 0.00253441 269 0 1.06684e+08 0.0634485 2.82570e+06 1.07807e+08 1.25007e+07 24913 5.31334e+07 0 0.204085 0.989584 0.724544 1.06684e+08 0.00369632 2.26365e+07 3.47551e+07 2.31058e+07 309 2.30877e+07 1.03153e+07 0.00311457 2.27875e+07 49.6728 0.0262107 0.990941 0 50.5131 GTEX-1KD5A-0001-SM-DE1KI B1 Blood Whole Blood 0013756 522 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KD5A-0001-SM-DJWXF B1 Blood Whole Blood 0013756 522 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KD5A-0006-SM-DIPEB B1 8.1 Blood Whole Blood 0013756 522 BP-62000 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.98097 514589 0.982499 0.982096 0.792482 18696 1 76 0.00241138 195 0 1.21355e+08 0.0165403 176739 1.23567e+08 8.9326e+06 18705 6.04054e+07 0 0.190017 0.982096 0.778294 1.21355e+08 0.0035876 2.86702e+07 1.75026e+08 2.87591e+07 238 2.8781e+07 3.23115e+07 0.00299881 2.87915e+07 50.0091 0.0014303 0.983222 0 50.0774 GTEX-1KD5A-0126-SM-E9U54 1 B1 6 pieces; hair-bearing skin, includes up to ~10% fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 531 506 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985838 373277 0.968803 0.986779 0.771133 24037 1 76 0.00180903 169 0 7.31784e+07 0.0309746 448911 7.41588e+07 2.86161e+06 24066 3.64633e+07 0 0.19767 0.986779 0.760937 7.31784e+07 0.00275553 1.60146e+07 9.94728e+06 1.61039e+07 168 1.60721e+07 1.25369e+07 0.00228183 1.61187e+07 50.0725 0.00605337 0.98772 0 50.139 GTEX-1KD5A-0226-SM-D5OV3 1 B1 6 pieces; essentially well trimmed, epidermis measures 39 microns 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 537 500 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.989433 277995 0.974872 0.991327 0.810824 23839 1 76 0.00391944 169 0 7.14361e+07 0.0248577 290980 7.2061e+07 9.79876e+06 23861 3.55585e+07 0 0.164049 0.991327 0.803791 7.14361e+07 0.00456381 1.56174e+07 6.96263e+06 1.57553e+07 154 1.57719e+07 1.33285e+07 0.00424101 1.57292e+07 49.9322 0.00403797 0.993221 0 50.2198 GTEX-1KD5A-0326-SM-D5OVD 1 B1 2 pieces; 20 and 50% fat, remainder is loose connective tissue, vessels, nerve 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 541 496 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.990671 183100 0.97808 0.992389 0.840641 22547 1 76 0.00391745 151 0 6.83714e+07 0.0215783 161885 6.88958e+07 9.57155e+06 22567 3.40433e+07 0 0.137439 0.992389 0.834242 6.83714e+07 0.00446931 1.50475e+07 6.23438e+06 1.51796e+07 150 1.51738e+07 1.40965e+07 0.00419291 1.51669e+07 49.9887 0.00234971 0.994107 0 50.2186 GTEX-1KD5A-0426-SM-D4P3X 1 B1 2 pieces; nodularity with scattered groups of lymphocytes 6.9 Thyroid Thyroid 0002046 543 494 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993482 181168 0.972208 0.994634 0.761749 24160 1 76 0.00264879 143 0 7.30562e+07 0.0273291 286704 7.34503e+07 9.31534e+06 24192 3.63947e+07 0 0.210459 0.994634 0.757662 7.30562e+07 0.0034548 1.60981e+07 7.2297e+06 1.62151e+07 157 1.62066e+07 1.22445e+07 0.00305133 1.61895e+07 49.9737 0.00390337 0.995786 0 50.1811 GTEX-1KD5A-0526-SM-E9U55 1 B1 2 pieces; nerve with trivial attachment of fat 6.7 Nerve Nerve - Tibial 0001323 546 491 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.987166 482939 0.954882 0.988134 0.725442 24083 1 76 0.00189834 173 0 7.47592e+07 0.0448259 299676 7.5657e+07 3.04052e+06 24122 3.72465e+07 0 0.229439 0.988134 0.716834 7.47592e+07 0.00279522 1.62838e+07 1.35957e+07 1.6381e+07 168 1.63477e+07 1.11146e+07 0.00234634 1.63925e+07 50.0685 0.00396098 0.989102 0 50.1489 GTEX-1KD5A-0626-SM-DIPEN 1 B1 2 pieces; mild plaque 8.7 Blood Vessel Artery - Tibial 0007610 548 489 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993631 558400 0.977152 0.994675 0.843491 21749 1 76 0.00209419 280 0 1.08855e+08 0.0224033 287059 1.09438e+08 8.35432e+06 21763 5.42456e+07 0 0.133661 0.994675 0.839 1.08855e+08 0.00298699 2.34004e+07 9.02156e+06 2.35429e+07 304 2.35799e+07 2.34758e+07 0.00254012 2.34734e+07 49.8869 0.00262303 0.995719 0 50.1519 GTEX-1KD5A-0726-SM-DIPEO 0 B1 2 pieces; up to 10% internal fat, some atrophy 8.1 Muscle Muscle - Skeletal 0011907 550 487 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.994512 494869 0.985693 0.995636 0.882941 20737 1 76 0.00174896 274 0 1.27382e+08 0.0140647 1.59301e+06 1.2794e+08 9.68423e+06 20750 6.3513e+07 0 0.102752 0.995636 0.879088 1.27382e+08 0.00254862 2.76132e+07 1.4544e+07 2.79674e+07 330 2.79587e+07 2.7734e+07 0.00214834 2.77412e+07 49.8047 0.0124512 0.996761 0 50.3186 GTEX-1KD5A-0826-SM-DKPQ9 1 B1 6 pieces; atherosclerotic plaque 6.2 Blood Vessel Artery - Aorta 0001496 553 484 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989694 247534 0.970886 0.992183 0.748844 23284 1 76 0.00285685 144 0 7.43405e+07 0.0287176 178120 7.49261e+07 7.16236e+06 23314 3.69685e+07 0 0.222042 0.992183 0.742991 7.43405e+07 0.00362742 1.61419e+07 7.67334e+06 1.62093e+07 156 1.62596e+07 1.24546e+07 0.00324117 1.62677e+07 50.0125 0.00237727 0.994673 0 50.1041 GTEX-1KD5A-0926-SM-D4P3U 1 B1 2 pieces; interstitial and patchy fibrosis 6.4 Heart Heart - Atrial Appendage 0006631 559 478 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993005 190473 0.987266 0.994493 0.845661 21345 1 76 0.00194626 369 0 1.25507e+08 0.0126344 1.24997e+07 1.26202e+08 1.57613e+07 21357 6.25762e+07 0 0.141605 0.994493 0.841004 1.25507e+08 0.00310815 2.75239e+07 4.49384e+07 2.90034e+07 379 2.87517e+07 8.31796e+06 0.00252633 2.79178e+07 49.2642 0.0990452 0.995981 0 51.3087 GTEX-1KD5A-1026-SM-CY8I8 1 B1 2 pieces; some interstitial fibrosis and minimal intervening fat 7.3 Heart Heart - Left Ventricle 0006566 563 474 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99132 360530 0.982918 0.993207 0.844479 21778 1 76 0.00435552 195 0 8.51799e+07 0.016869 3.00582e+06 8.57625e+07 9.97209e+06 21794 4.24095e+07 0 0.138439 0.993207 0.838743 8.51799e+07 0.00710821 1.91691e+07 8.24172e+06 1.93784e+07 213 1.94772e+07 1.36476e+07 0.00572925 1.92184e+07 49.6655 0.0350482 0.995094 0 50.2715 GTEX-1KD5A-1126-SM-CXZK6 1 B1 2 pieces; includes few larger vessels, many pigmented macrophages 6.5 Lung Lung 0008952 568 469 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993014 221438 0.974079 0.994215 0.756824 23570 1 76 0.00225759 204 0 9.00468e+07 0.0256475 685958 9.05707e+07 5.59307e+06 23611 4.48569e+07 0 0.217255 0.994215 0.752446 9.00468e+07 0.00295615 1.99412e+07 7.4391e+06 2.02293e+07 238 2.01644e+07 1.26417e+07 0.00260645 2.01085e+07 49.9307 0.00757373 0.995416 0 50.3587 GTEX-1KD5A-1226-SM-CXZK7 1 B1 2 pieces; mild to moderate steatosis 6.7 Liver Liver 0001114 571 466 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994475 282353 0.978801 0.995673 0.851036 21274 1 76 0.00210115 204 0 9.18603e+07 0.0208311 1.95815e+06 9.22595e+07 5.76687e+06 21291 4.57802e+07 0 0.127766 0.995673 0.847354 9.18603e+07 0.00290103 1.98343e+07 1.362e+07 2.02109e+07 242 2.02189e+07 1.80292e+07 0.00250061 1.99306e+07 49.6409 0.0212244 0.996872 0 50.4701 GTEX-1KD5A-1326-SM-CYPTB 1 B1 2 pieces; mature fat, some central defects 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 573 464 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.99338 197747 0.975791 0.99409 0.774872 22755 1 76 0.00220178 133 0 6.17615e+07 0.0238996 313778 6.21287e+07 4.33916e+06 22777 3.07848e+07 0 0.200919 0.99409 0.770292 6.17615e+07 0.00284348 1.36787e+07 5.86244e+06 1.37592e+07 145 1.37292e+07 1.05447e+07 0.0025224 1.37553e+07 50.0474 0.00505045 0.994799 0 50.1467 GTEX-1KD5A-1426-SM-D4P3V 2 B1 6 pieces; variable representation of mucosa and muscularis 5.7 Stomach Stomach 0000945 577 460 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991393 269276 0.96935 0.993039 0.746085 24357 1 76 0.0025491 172 0 8.65249e+07 0.0304177 898552 8.71314e+07 1.08082e+07 24400 4.30731e+07 0 0.223266 0.993039 0.740891 8.65249e+07 0.00420906 1.89306e+07 9.35612e+06 1.91352e+07 202 1.90905e+07 1.22758e+07 0.00337771 1.91115e+07 50.0276 0.0103126 0.994684 0 50.2687 GTEX-1KD5A-1526-SM-D4P3W 2 B1 2 pieces; congested 6.1 Spleen Spleen 0002106 579 458 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.990823 352127 0.955774 0.992295 0.738394 25194 1 76 0.00283608 266 0 1.01984e+08 0.0436689 921167 1.02776e+08 1.26694e+07 25240 5.07449e+07 0 0.21738 0.992295 0.732704 1.01984e+08 0.00453439 2.21229e+07 1.53474e+07 2.23056e+07 261 2.22617e+07 1.27903e+07 0.00368398 2.23145e+07 50.0592 0.00896287 0.993766 0 50.2057 GTEX-1KD5A-1826-SM-DHXJI 2 B1 2 pieces; reduced spermatogenesis 6.3 Testis Testis 0000473 590 447 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992227 643742 0.942342 0.993018 0.723428 32964 1 76 0.00243897 279 0 1.13481e+08 0.0573992 1.57843e+06 1.14279e+08 6.53971e+06 33039 5.65437e+07 0 0.218914 0.993018 0.718376 1.13481e+08 0.00255057 2.44059e+07 1.39621e+07 2.46689e+07 298 2.4702e+07 1.65211e+07 0.00249473 2.44555e+07 49.7493 0.0138121 0.993808 0 50.268 GTEX-1KD5A-1926-SM-DKPQA 0 B1 2 pieces; fat with minor component of stroma (~10%) 5.8 Breast Breast - Mammary Tissue 0008367 591 446 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.990795 222399 0.975187 0.993015 0.788322 23776 1 76 0.00262726 276 0 9.58296e+07 0.0245149 887272 9.65037e+07 9.21975e+06 23813 4.77056e+07 0 0.186865 0.993015 0.782816 9.58296e+07 0.00318518 2.11048e+07 1.08483e+07 2.13193e+07 288 2.13423e+07 1.46991e+07 0.0029056 2.12844e+07 49.9321 0.00919418 0.995235 0 50.2528 GTEX-1KD5A-2226-SM-EV79U 1 B1 2 pieces; well trimmed, 1 piece includes small amount of internal fat and some chronic inflammation 8.2 Salivary Gland Minor Salivary Gland 0006330 616 421 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988854 311753 0.978188 0.989999 0.829635 24194 1 76 0.00279303 292 0 1.12024e+08 0.0202324 377738 1.13156e+08 1.2999e+07 24227 5.57453e+07 0 0.148553 0.989999 0.821338 1.12024e+08 0.00385556 2.56497e+07 2.74196e+07 2.60123e+07 318 2.60169e+07 2.09732e+07 0.00332368 2.57676e+07 49.7593 0.00333821 0.991144 0 50.3509 GTEX-1KD5A-2526-SM-CXZK8 2 B1 2 pieces; neurohypophysis with attached dense fibrous tissue 6.2 Pituitary Pituitary 0000007 673 364 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992489 261870 0.967686 0.994131 0.724532 26131 1 76 0.00208391 205 0 9.38181e+07 0.032036 1.36867e+06 9.4372e+07 6.18056e+06 26180 4.6728e+07 0 0.243154 0.994131 0.720279 9.38181e+07 0.00309219 2.05475e+07 8.62136e+06 2.08712e+07 236 2.08686e+07 1.25158e+07 0.00258722 2.06964e+07 49.7929 0.0145029 0.995772 0 50.3907 GTEX-1KWVE-0003-SM-DE1ID B1 Blood Whole Blood 0013756 1242 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KWVE-0003-SM-DJWWN B1 Blood Whole Blood 0013756 1242 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KWVE-0005-SM-CYPSE B1 8.2 Blood Whole Blood 0013756 1242 BP-62000 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.975754 229363 0.986944 0.976399 0.813729 18688 1 76 0.0022195 121 0 9.52125e+07 0.0122524 188731 9.75139e+07 7.04444e+06 18696 4.74463e+07 0 0.173215 0.976399 0.794524 9.52125e+07 0.0025966 2.2584e+07 1.44376e+08 2.26782e+07 153 2.26584e+07 2.67356e+07 0.00240792 2.26737e+07 50.0169 0.00193543 0.977044 0 50.1041 GTEX-1KWVE-0005-SM-DIPE4 B1 8.2 Blood Whole Blood 0013756 1242 BP-62000 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2015 LCSET-10311 01/17/2017 TruSeq.v1 EXCLUDE 0.930903 1.39601e+07 0.644566 0.932205 0.428873 18915 1 76 0.00174785 100 0 1.38486e+08 0.35146 2.0147e+06 1.48557e+08 1.00466e+07 18933 6.87992e+07 0 0.215693 0.932205 0.399798 1.38486e+08 0.00312512 2.03867e+07 6.79127e+08 2.16779e+07 123 2.16037e+07 1.78509e+07 0.00243553 2.07906e+07 49.041 0.0135618 0.933508 0 51.5348 GTEX-1KWVE-0226-SM-E9TKK 1 B1 2 pieces; <5% fibrous content 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1341 1332 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.975524 237032 0.975641 0.977073 0.826287 23305 1 76 0.00207289 193 0 7.64345e+07 0.0240901 1.05625e+06 7.82281e+07 3.58106e+06 23327 3.80093e+07 0 0.149353 0.977073 0.807343 7.64345e+07 0.00262507 1.67651e+07 8.1878e+06 1.7076e+07 206 1.69943e+07 1.23744e+07 0.00234854 1.69618e+07 49.9522 0.0135022 0.978621 0 50.4594 GTEX-1KWVE-0326-SM-EV7AF 1 B1 2 pieces; central vein congestion 6.4 Liver Liver 0001114 1342 1331 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.982713 214326 0.968317 0.983806 0.789523 22417 1 76 0.00240371 265 0 9.03189e+07 0.0315711 2.57856e+06 9.18056e+07 1.02557e+07 22449 4.49916e+07 0 0.178793 0.983806 0.776738 9.03189e+07 0.00363505 1.97106e+07 1.20457e+07 2.0033e+07 314 1.99188e+07 1.05544e+07 0.0030187 1.99089e+07 49.9876 0.0280872 0.984899 0 50.4056 GTEX-1KWVE-0426-SM-DHXJX 2 B1 2 pieces; moderate vascular congestion and alveolar edema, hemorrhage and macrophages 6.6 Lung Lung 0008952 1342 1331 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993061 236239 0.971492 0.993743 0.744343 24625 1 76 0.00257388 204 0 8.97822e+07 0.0281079 349971 9.03476e+07 5.22395e+06 24667 4.47423e+07 0 0.227149 0.993743 0.739685 8.97822e+07 0.00268529 1.97712e+07 8.2148e+06 2.0026e+07 227 1.99892e+07 1.36246e+07 0.00262955 1.98685e+07 49.8486 0.00387361 0.994424 0 50.3201 GTEX-1KWVE-0726-SM-D4P3O 1 B1 2 pieces; 10% external fat 5.8 Adrenal Gland Adrenal Gland 0002369 1346 1327 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993018 232657 0.96933 0.994753 0.807184 23142 1 76 0.00231145 205 0 8.38472e+07 0.0304413 3.66346e+06 8.42895e+07 9.74171e+06 23174 4.1761e+07 0 0.162146 0.994753 0.802949 8.38472e+07 0.00415982 1.83015e+07 1.09436e+07 1.86015e+07 232 1.85675e+07 1.15793e+07 0.00323403 1.84749e+07 49.8751 0.0434628 0.996489 0 50.4065 GTEX-1KWVE-0826-SM-CXZKO 2 B1 6 pieces; no active or chronic lesions 5.6 Kidney Kidney - Cortex 0001225 1348 1325 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994553 199205 0.976266 0.995769 0.850532 22685 1 76 0.00191289 265 0 7.64816e+07 0.0235589 3.11034e+06 7.68066e+07 5.17157e+06 22701 3.81359e+07 0 0.125734 0.995769 0.846934 7.64816e+07 0.0024159 1.6786e+07 1.25775e+07 1.75595e+07 301 1.75655e+07 8.30002e+06 0.00216409 1.68718e+07 48.9928 0.0404958 0.996985 0 51.1262 GTEX-1KWVE-0926-SM-CXZKP 0 B1 2 fragmented pieces; striations visible; minimal fat content 8.1 Muscle Muscle - Skeletal 0011907 1349 1324 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.99475 232035 0.985073 0.995967 0.886538 19998 1 76 0.00168012 268 0 9.74445e+07 0.0146734 1.00647e+06 9.78392e+07 6.38018e+06 20009 4.859e+07 0 0.0985344 0.995967 0.882962 9.74445e+07 0.00237261 2.09482e+07 8.1145e+06 2.14121e+07 295 2.14298e+07 2.21961e+07 0.00202594 2.10335e+07 49.5334 0.010287 0.997183 0 50.5475 GTEX-1KWVE-1026-SM-D3L9O 1 B1 6 pieces; well trimmed; up to 10% dermal fat; up to 4 hair follicles per piece 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1349 1324 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990836 371150 0.973505 0.992971 0.768064 24560 1 76 0.00262438 224 0 8.99457e+07 0.0262439 385929 9.05824e+07 9.33654e+06 24610 4.47647e+07 0 0.205442 0.992971 0.762665 8.99457e+07 0.00365428 1.96398e+07 9.18127e+06 1.98292e+07 206 1.98621e+07 1.52247e+07 0.00313822 1.97886e+07 49.9073 0.00426053 0.995106 0 50.24 GTEX-1KWVE-1126-SM-DHXJY 1 B1 2 fragmented pieces; active spermatogenesis 7.1 Testis Testis 0000473 1353 1320 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992201 802746 0.922027 0.993032 0.718853 34546 1 76 0.00224793 289 0 1.16731e+08 0.0776152 736771 1.1755e+08 6.05688e+06 34623 5.81667e+07 0 0.203174 0.993032 0.713844 1.16731e+08 0.00258748 2.38937e+07 2.09446e+07 2.41013e+07 279 2.41869e+07 1.9868e+07 0.00241756 2.38918e+07 49.6931 0.00626773 0.993863 0 50.2163 GTEX-1KWVE-1226-SM-EV7AG 1 B1 2 pieces; unusually well preserved glands; 3x0.5mm fibrofatty cap at 1 end of 1 piece 6.9 Prostate Prostate 0002367 1353 1320 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.984869 288398 0.959638 0.986204 0.75333 27187 1 76 0.00252023 208 0 8.81978e+07 0.0400599 916317 8.94316e+07 9.55104e+06 27226 4.39089e+07 0 0.206308 0.986204 0.742937 8.81978e+07 0.00420212 1.93917e+07 1.08814e+07 1.96332e+07 241 1.9574e+07 1.03871e+07 0.00336003 1.95659e+07 49.9897 0.010246 0.98754 0 50.3095 GTEX-1KWVE-1326-SM-E6CJ1 1 B1 2 pieces; 20 & 40% fibrovascular content; small [0.3mm] focus of glandular carry-over [labeled] 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 1355 1318 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992654 330287 0.974453 0.993864 0.812565 24079 1 76 0.00190405 284 0 1.025e+08 0.0251816 334382 1.03133e+08 6.37108e+06 24111 5.10434e+07 0 0.161888 0.993864 0.807579 1.025e+08 0.00253592 2.23579e+07 8.38126e+06 2.25356e+07 322 2.24258e+07 1.95211e+07 0.0022196 2.25785e+07 50.1696 0.00324225 0.995074 0 50.198 GTEX-1KWVE-1426-SM-E9TJO 1 B1 6 fragmented pieces; up to 40% dermal fat content 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1355 1318 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983759 355139 0.970609 0.985765 0.763667 22735 1 76 0.00210266 155 0 6.14721e+07 0.0291847 284715 6.23598e+07 2.76445e+06 22767 3.05633e+07 0 0.206941 0.985765 0.752797 6.14721e+07 0.00279014 1.34035e+07 6.14839e+06 1.35383e+07 147 1.35378e+07 9.89818e+06 0.0024457 1.35206e+07 49.9682 0.00456568 0.987771 0 50.2503 GTEX-1KWVE-1526-SM-E6CJ2 1 B1 2 pieces; low fat content 7 Nerve Nerve - Tibial 0001323 1358 1315 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991912 140857 0.964241 0.993047 0.726793 23568 1 76 0.0020756 137 0 6.17109e+07 0.035453 187979 6.21429e+07 3.83039e+06 23607 3.07315e+07 0 0.237448 0.993047 0.721739 6.17109e+07 0.00272515 1.35097e+07 5.00513e+06 1.36313e+07 135 1.35555e+07 9.4403e+06 0.0024 1.36493e+07 50.1724 0.00302495 0.994182 0 50.224 GTEX-1KWVE-1626-SM-DKPPA 1 B1 2 pieces; well trimmed; minimal intimal thickening 6.1 Blood Vessel Artery - Tibial 0007610 1358 1315 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991831 334031 0.976076 0.994043 0.84081 21441 1 76 0.00273201 169 0 8.41716e+07 0.0235153 284778 8.4676e+07 9.23602e+06 21455 4.18902e+07 0 0.135266 0.994043 0.835801 8.41716e+07 0.00294818 1.79286e+07 6.95481e+06 1.8073e+07 195 1.80803e+07 1.70117e+07 0.00283986 1.80972e+07 50.0233 0.00336315 0.996254 0 50.2005 GTEX-1KWVE-2126-SM-CXZKM 1 B1 1 piece; all adenohypophysis 7.5 Pituitary Pituitary 0000007 1372 1301 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993218 553916 0.957451 0.994636 0.78468 26088 1 76 0.00199961 375 0 1.07077e+08 0.0423032 299084 1.07655e+08 6.87881e+06 26135 5.33533e+07 0 0.172771 0.994636 0.78047 1.07077e+08 0.00294573 2.22459e+07 1.64701e+07 2.26789e+07 337 2.26758e+07 1.78715e+07 0.00247199 2.23939e+07 49.6872 0.00277817 0.996053 0 50.4819 GTEX-1KWVE-2226-SM-CXZKN 1 B1 4 fragmented pieces 6.8 Brain Brain - Cerebellum 0002037 1373 1300 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992295 636212 0.938206 0.993889 0.711462 24670 1 76 0.00214837 269 0 9.56289e+07 0.0614957 1.60637e+06 9.62169e+07 6.22342e+06 24708 4.76136e+07 0 0.226743 0.993889 0.707114 9.56289e+07 0.00316875 2.03345e+07 2.27499e+07 2.07485e+07 267 2.07751e+07 1.03626e+07 0.00265774 2.04512e+07 49.6071 0.0166953 0.995483 0 50.5039 GTEX-1KWVE-2326-SM-D4P3N 1 B1 4 pieces; 2.5x2.5mm focus of bone and meningeal debris embedded in cortex [labeled] 6.6 Brain Brain - Cortex 0001870 1375 1298 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993838 474229 0.966405 0.995285 0.839757 25484 1 76 0.00225153 374 0 1.34232e+08 0.033123 4.5607e+06 1.34868e+08 1.55456e+07 25514 6.68858e+07 0 0.126648 0.995285 0.835798 1.34232e+08 0.00349283 2.93143e+07 2.2614e+07 2.98259e+07 345 2.97144e+07 1.70258e+07 0.00287128 2.95837e+07 49.8898 0.0338161 0.996732 0 50.4326 GTEX-1KXAM-0004-SM-DE1K5 B1 Blood Whole Blood 0013756 -85 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1KXAM-0004-SM-DJWX8 B1 Blood Whole Blood 0013756 -85 BP-61991 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1KXAM-0005-SM-DIPEC B1 9.8 Blood Whole Blood 0013756 -85 BP-62000 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99235 695907 0.966527 0.993584 0.799237 19769 1 76 0.0027199 159 0 9.61643e+07 0.0328673 181073 9.67853e+07 7.27386e+06 19785 4.78933e+07 0 0.16729 0.993584 0.794109 9.61643e+07 0.00384773 2.13208e+07 4.3381e+07 2.13901e+07 194 2.14703e+07 2.0383e+07 0.00328312 2.1361e+07 49.8723 0.00187087 0.994817 0 50.081 GTEX-1KXAM-0226-SM-EV7AP 1 B1 2 pieces, islets well-preserved, rep. encircled; ~30% adherent/interstitial fat, rep delineated 7.2 Pancreas Pancreas 0001150 116 869 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990583 228804 0.976303 0.991695 0.840732 22828 1 76 0.00248623 134 0 9.32809e+07 0.0233681 286698 9.40621e+07 1.02424e+07 22853 4.64851e+07 0 0.135571 0.991695 0.83375 9.32809e+07 0.00359919 2.13033e+07 2.52493e+07 2.15834e+07 156 2.15199e+07 2.62893e+07 0.00304209 2.14689e+07 49.9407 0.00304796 0.992807 0 50.3266 GTEX-1KXAM-0326-SM-EV7AQ 1 B1 2 pieces, cortex 8.5 Adrenal Gland Adrenal Gland 0002369 118 867 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.992897 332360 0.978229 0.993791 0.8396 24408 1 76 0.00237942 278 0 1.22707e+08 0.0213679 1.68005e+06 1.23474e+08 1.30706e+07 24438 6.11732e+07 0 0.138629 0.993791 0.834387 1.22707e+08 0.00337392 2.7254e+07 1.29067e+07 2.74914e+07 306 2.74094e+07 2.29509e+07 0.00287622 2.74287e+07 50.0176 0.0136066 0.994684 0 50.2169 GTEX-1KXAM-0426-SM-DHXKG 1 B1 2 pieces, patchy foci of acute pneumonia, ensquared 9.1 Lung Lung 0008952 122 863 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993473 483737 0.979691 0.9943 0.84108 24278 1 76 0.00235976 276 0 1.11581e+08 0.0199625 648471 1.12221e+08 6.16236e+06 24307 5.56168e+07 0 0.138611 0.9943 0.836285 1.11581e+08 0.002632 2.48627e+07 1.07075e+07 2.5197e+07 314 2.51768e+07 2.3088e+07 0.00249577 2.49707e+07 49.7945 0.00577854 0.995126 0 50.334 GTEX-1KXAM-0526-SM-DKPQN 1 B1 2 pieces, trace fascia/vascular elements, rep delineated 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 127 858 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992245 323329 0.9773 0.994357 0.825486 23745 1 76 0.00273755 276 0 1.01405e+08 0.0224183 706038 1.0198e+08 1.01159e+07 23775 5.0503e+07 0 0.151814 0.994357 0.820828 1.01405e+08 0.00323438 2.22992e+07 8.63781e+06 2.26068e+07 307 2.26313e+07 1.78888e+07 0.00298544 2.24747e+07 49.8264 0.0069233 0.996468 0 50.3425 GTEX-1KXAM-0626-SM-DHXKH 1 B1 6 pieces, confirmed target muscularis 9.2 Esophagus Esophagus - Muscularis 0004648 132 853 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993736 473248 0.97774 0.994636 0.845483 23137 1 76 0.00218417 293 0 1.13113e+08 0.0219354 787636 1.13723e+08 6.15825e+06 23167 5.63787e+07 0 0.132257 0.994636 0.840948 1.13113e+08 0.00252201 2.44066e+07 9.14462e+06 2.47935e+07 318 2.47365e+07 2.2062e+07 0.00235294 2.45595e+07 49.8205 0.00692592 0.995536 0 50.3931 GTEX-1KXAM-0726-SM-E9U5I 1 B1 6 pieces, confirmed target muscularis 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 135 850 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.9886 274720 0.974731 0.9895 0.831627 22502 1 76 0.00174145 208 0 8.21548e+07 0.0249817 536102 8.30265e+07 3.03325e+06 22518 4.0954e+07 0 0.143104 0.9895 0.822895 8.21548e+07 0.00269568 1.78595e+07 6.33528e+06 1.8022e+07 207 1.79547e+07 1.52523e+07 0.00221813 1.79977e+07 50.0599 0.006457 0.9904 0 50.2264 GTEX-1KXAM-0826-SM-CXZK9 1 B1 6 pieces, squamous mucosa up to ~0.7mm, ~30% of thickness. Rare submucosal mucus glands present, encircled 9.3 Esophagus Esophagus - Mucosa 0006920 136 849 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.99348 354871 0.976116 0.994858 0.83156 22947 1 76 0.00205469 280 0 1.06523e+08 0.0236265 619266 1.07073e+08 6.91129e+06 22974 5.30944e+07 0 0.144555 0.994858 0.827284 1.06523e+08 0.00268161 2.38331e+07 1.46222e+07 2.43146e+07 328 2.43195e+07 2.13229e+07 0.00236771 2.39661e+07 49.6341 0.00578357 0.996235 0 50.5 GTEX-1KXAM-0926-SM-CXZKA 1 B1 6 pieces, mucosa well - preserved, up to ~1mm, ~25% thickness. Microcystic metaplastic changes noted, delineated. 7.2 Stomach Stomach 0000945 139 846 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.988112 210542 0.979254 0.989734 0.827233 23347 1 76 0.00203987 337 0 9.45584e+07 0.0202764 667528 9.55392e+07 6.00544e+06 23374 4.70964e+07 0 0.15202 0.989734 0.818741 9.45584e+07 0.00307678 2.15378e+07 7.9131e+07 2.20728e+07 262 2.20923e+07 2.29457e+07 0.00255747 2.16672e+07 49.5143 0.00698695 0.991357 0 50.6134 GTEX-1KXAM-1026-SM-CY8IA 1 B1 2 pieces, localized stromal (delineated) and ductal (encircled) gynecomastoid hyperplasia. 8 Breast Breast - Mammary Tissue 0008367 143 842 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990011 388124 0.973186 0.992145 0.796313 24332 1 76 0.00460072 163 0 8.29925e+07 0.0264965 302019 8.36496e+07 9.79417e+06 24371 4.12968e+07 0 0.176873 0.992145 0.790058 8.29925e+07 0.00783127 1.82249e+07 7.23955e+06 1.83727e+07 170 1.83978e+07 1.49312e+07 0.00621252 1.83689e+07 49.9607 0.00361053 0.994279 0 50.2019 GTEX-1KXAM-1126-SM-E9TJU 1 B1 2 pieces, glandular hyperplastic pattern, patchy acute prostatis, rep foci encircled. 8.3 Prostate Prostate 0002367 144 841 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988391 559219 0.978664 0.990277 0.847494 23891 1 76 0.00192912 278 0 1.14219e+08 0.0209757 309826 1.1534e+08 4.767e+06 23912 5.68588e+07 0 0.13117 0.990277 0.839253 1.14219e+08 0.00249574 2.47686e+07 7.70418e+06 2.50347e+07 325 2.50346e+07 2.46641e+07 0.00221189 2.49695e+07 49.9349 0.00268619 0.992163 0 50.2671 GTEX-1KXAM-1226-SM-E9TJV 1 B1 6 pieces, atherosis up to ~0.2mm 7.4 Blood Vessel Artery - Aorta 0001496 147 838 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986327 428292 0.976816 0.988109 0.836556 22524 1 76 0.00198509 211 0 9.45115e+07 0.0227676 282669 9.56488e+07 4.03282e+06 22548 4.7031e+07 0 0.14026 0.988109 0.826608 9.45115e+07 0.00266135 2.05686e+07 5.96121e+06 2.0742e+07 247 2.07145e+07 1.85094e+07 0.00232261 2.07552e+07 50.0491 0.00295528 0.989891 0 50.2098 GTEX-1KXAM-1326-SM-E9TJW 1 B1 2 pieces, mild acute ischemic changes (contraction band necrosis) rep foci encircled 8.8 Heart Heart - Left Ventricle 0006566 149 836 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.990113 611438 0.985787 0.991959 0.867305 21852 1 76 0.00204259 374 0 1.31028e+08 0.0138855 2.88141e+06 1.3209e+08 5.18412e+06 21866 6.52284e+07 0 0.118482 0.991959 0.860331 1.31028e+08 0.00245573 2.87234e+07 2.71559e+07 2.88531e+07 343 2.89072e+07 2.39821e+07 0.00224878 2.88705e+07 49.9683 0.021814 0.993805 0 50.1127 GTEX-1KXAM-1426-SM-D3LAC 1 B1 2 pieces, no abnormalities 8.8 Heart Heart - Atrial Appendage 0006631 152 833 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992696 380116 0.980557 0.994724 0.855093 22025 1 76 0.00251426 269 0 1.15278e+08 0.0191575 2.59317e+06 1.15889e+08 1.15448e+07 22045 5.742e+07 0 0.125463 0.994724 0.850582 1.15278e+08 0.00364958 2.4822e+07 1.72665e+07 2.51869e+07 322 2.50869e+07 1.87235e+07 0.00308076 2.51108e+07 50.0238 0.0223762 0.996752 0 50.3648 GTEX-1KXAM-1526-SM-D4P3Y 1 B1 2 pieces, subtotally occlusive atherosis, delineated 6.4 Blood Vessel Artery - Coronary 0001621 157 828 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993617 171686 0.968565 0.994967 0.799236 22236 1 76 0.00259184 123 0 5.91561e+07 0.0311407 388694 5.94554e+07 7.74475e+06 22259 2.94793e+07 0 0.169329 0.994967 0.795214 5.91561e+07 0.0036338 1.28014e+07 6.99958e+06 1.30165e+07 133 1.29823e+07 9.94015e+06 0.00311211 1.2907e+07 49.8545 0.00653758 0.996316 0 50.4166 GTEX-1KXAM-1626-SM-D3LAD 0 B1 7 pieces, trace dermal fat, rep delineated; squamous epithelium is ~40 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 159 826 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990423 361926 0.971063 0.992674 0.785932 23418 1 76 0.00258513 196 0 8.21086e+07 0.0287334 471337 8.27146e+07 8.25988e+06 23455 4.08696e+07 0 0.185131 0.992674 0.780174 8.21086e+07 0.00405754 1.7996e+07 8.3189e+06 1.8129e+07 190 1.8137e+07 1.38251e+07 0.00331966 1.81641e+07 50.0373 0.00569835 0.994924 0 50.1841 GTEX-1KXAM-1726-SM-D3LAE 1 B1 2 pieces, no abnormalities 8.1 Thyroid Thyroid 0002046 168 817 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.99242 340936 0.969742 0.994111 0.772554 24923 1 76 0.00251962 276 0 1.1372e+08 0.0299396 336353 1.14394e+08 1.16417e+07 24977 5.66548e+07 0 0.197188 0.994111 0.768004 1.1372e+08 0.00316875 2.49373e+07 1.02616e+07 2.51474e+07 305 2.51768e+07 1.99973e+07 0.00284364 2.50841e+07 49.9078 0.00294031 0.995801 0 50.2097 GTEX-1KXAM-1826-SM-D3LAF 1 B1 2 pieces, spermatogenesis appears markedly reduced 7.2 Testis Testis 0000473 168 817 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990774 330367 0.949945 0.992827 0.737349 31483 1 76 0.00277914 162 0 8.11713e+07 0.0497967 1.0314e+06 8.17578e+07 8.63252e+06 31542 4.04126e+07 0 0.212597 0.992827 0.73206 8.11713e+07 0.00365768 1.75603e+07 8.86408e+06 1.77339e+07 172 1.7801e+07 1.2375e+07 0.0032175 1.76422e+07 49.7761 0.0126153 0.994881 0 50.2459 GTEX-1KXAM-1926-SM-D3LAG 1 B1 6 pieces, confirmed target muscularis 8.9 Colon Colon - Sigmoid 0001159 173 812 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.993321 318641 0.975764 0.994975 0.834831 23640 1 76 0.00227959 285 0 1.13238e+08 0.0239087 617894 1.1381e+08 9.72997e+06 23665 5.64218e+07 0 0.140933 0.994975 0.830636 1.13238e+08 0.00336965 2.43748e+07 8.71594e+06 2.45674e+07 312 2.45698e+07 2.18432e+07 0.00282371 2.45399e+07 49.9696 0.00542919 0.996629 0 50.1968 GTEX-1KXAM-2026-SM-DHXKI 1 B1 6 pieces, abundant target lymphoid aggregates are ~30% of tissue, rep delineated 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 176 809 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992696 386803 0.971826 0.993746 0.806483 24417 1 76 0.00262253 171 0 8.18542e+07 0.0273344 496400 8.23693e+07 4.48521e+06 24448 4.07603e+07 0 0.165343 0.993746 0.80144 8.18542e+07 0.00310882 1.8162e+07 9.50283e+06 1.84323e+07 193 1.84245e+07 1.44976e+07 0.00286542 1.82486e+07 49.7602 0.00602652 0.994796 0 50.3693 GTEX-1KXAM-2126-SM-CY8I9 1 B1 6 pieces, target mucosa up to ~0.5mm, ~10-15% thickness 7.4 Colon Colon - Transverse 0001157 180 805 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990272 295866 0.975501 0.992239 0.819999 24271 1 76 0.00475217 177 0 8.49352e+07 0.0240261 1.01232e+06 8.55995e+07 1.00954e+07 24298 4.22654e+07 0 0.155501 0.992239 0.813635 8.49352e+07 0.00766357 1.88704e+07 7.98035e+06 1.90349e+07 189 1.90308e+07 1.40961e+07 0.00620498 1.90293e+07 49.998 0.0118262 0.994205 0 50.217 GTEX-1KXAM-2226-SM-CYPTC 0 B1 6 pieces, trace dermal fat, rep delineated; squamous epithelium up to ~4-45 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 194 791 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994768 181470 0.971915 0.995465 0.787331 22254 1 76 0.00227726 161 0 6.43511e+07 0.0278707 331384 6.46443e+07 4.80651e+06 22277 3.20926e+07 0 0.184584 0.995465 0.78376 6.43511e+07 0.00280887 1.40148e+07 6.31759e+06 1.41076e+07 152 1.4067e+07 1.05378e+07 0.00254288 1.41003e+07 50.0591 0.00512627 0.996161 0 50.1649 GTEX-1KXAM-2326-SM-CYPTD 0 B1 2 pieces, fascia is ~20% tissue, rep delineated 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 192 793 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995308 233722 0.980004 0.995953 0.845284 21439 1 76 0.00216674 160 0 6.70164e+07 0.0196433 226524 6.72887e+07 4.84683e+06 21455 3.34229e+07 0 0.13472 0.995953 0.841864 6.70164e+07 0.00256935 1.48165e+07 5.26617e+06 1.49247e+07 158 1.4896e+07 1.37716e+07 0.00236791 1.48894e+07 49.989 0.00336645 0.9966 0 50.1819 GTEX-1KXAM-2426-SM-DIPFC 0 B1 2 pieces, interstitial fat is ~10% of tissue, rep delineated 9.2 Muscle Muscle - Skeletal 0011907 199 786 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993691 613480 0.985477 0.994976 0.880419 20350 1 76 0.00202549 382 0 1.25318e+08 0.0142564 1.38644e+06 1.2595e+08 9.25672e+06 20360 6.24621e+07 0 0.105058 0.994976 0.875996 1.25318e+08 0.00321203 2.70146e+07 1.46584e+07 2.72836e+07 336 2.72925e+07 2.58142e+07 0.00261799 2.71395e+07 49.8595 0.0110079 0.996261 0 50.2477 GTEX-1KXAM-2526-SM-DIPFD 0 B1 4 pieces, nubbins of adherent fat up to ~1mm, rep delineated 6.7 Nerve Nerve - Tibial 0001323 205 780 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992541 494543 0.96469 0.99361 0.73564 25630 1 76 0.00236522 382 0 1.13051e+08 0.0350658 539902 1.13778e+08 8.0608e+06 25684 5.63319e+07 0 0.22905 0.99361 0.730939 1.13051e+08 0.00326101 2.48083e+07 1.06616e+07 2.49396e+07 336 2.49236e+07 1.63431e+07 0.00281263 2.494e+07 50.0164 0.00474524 0.99468 0 50.1319 GTEX-1KXAM-5013-SM-AN492 B1 Heart Heart - Left Ventricle 0006566 152 ChIP-Seq GTEX-1KXAM-5019-SM-AN493 B1 Muscle Muscle - Skeletal 0011907 199 ChIP-Seq GTEX-1L5NE-0002-SM-DE1ND B1 Blood Whole Blood 0013756 -178 BP-62094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/30/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1L5NE-0002-SM-DJWXX B1 Blood Whole Blood 0013756 -178 BP-62094 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/30/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1L5NE-0005-SM-DIPEG B1 9 Blood Whole Blood 0013756 -178 BP-62096 RNA isolation_PAXgene Blood RNA (Manual) 03/30/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.991912 1.26539e+06 0.960981 0.993247 0.822528 19555 1 76 0.0023855 271 0 1.18907e+08 0.0385342 485339 1.19715e+08 8.698e+06 19565 5.92284e+07 0 0.138453 0.993247 0.816974 1.18907e+08 0.00331591 2.60257e+07 5.28997e+07 2.62195e+07 316 2.62827e+07 2.5691e+07 0.00285008 2.61304e+07 49.8548 0.00405412 0.994583 0 50.1855 GTEX-1L5NE-0326-SM-E6CIC 1 B1 6 pieces, minimal atherosis 7.1 Blood Vessel Artery - Aorta 0001496 89 498 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993613 221284 0.979678 0.994786 0.861152 21554 1 76 0.00174471 167 0 7.62875e+07 0.0198807 256888 7.66873e+07 4.38924e+06 21566 3.79998e+07 0 0.118526 0.994786 0.856662 7.62875e+07 0.00247953 1.67234e+07 4.7834e+06 1.68416e+07 189 1.67653e+07 1.62307e+07 0.00211169 1.68806e+07 50.1714 0.00334981 0.99596 0 50.176 GTEX-1L5NE-0426-SM-E9TIX 1 B1 2 pieces, moderate chronic ischemic changes/interstitial fibrosis; ~2mm remote micro-infarct encircled. 8.7 Heart Heart - Left Ventricle 0006566 95 492 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.991081 620594 0.987698 0.992812 0.885012 20598 1 76 0.00181523 375 0 1.29977e+08 0.0119829 3.88977e+06 1.30918e+08 5.04809e+06 20609 6.47266e+07 0 0.102686 0.992812 0.87865 1.29977e+08 0.002153 2.87653e+07 2.63864e+07 2.89469e+07 343 2.88903e+07 2.35667e+07 0.00198382 2.90084e+07 50.102 0.0297114 0.994542 0 50.1574 GTEX-1L5NE-0526-SM-DIPG5 1 B1 2 pieces, no abnormalities 8.5 Heart Heart - Atrial Appendage 0006631 98 489 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993942 280909 0.982136 0.995083 0.858147 21996 1 76 0.00204602 271 0 1.01793e+08 0.0175813 2.18235e+06 1.02296e+08 7.9777e+06 22008 5.07567e+07 0 0.123989 0.995083 0.853928 1.01793e+08 0.00288411 2.20882e+07 1.57294e+07 2.25118e+07 306 2.24043e+07 1.76299e+07 0.00246459 2.22827e+07 49.8639 0.0213336 0.996225 0 50.4749 GTEX-1L5NE-0726-SM-CXZKQ 1 B1 2 pieces, mild congestion 7.8 Lung Lung 0008952 101 486 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993945 233435 0.973162 0.995252 0.796902 24265 1 76 0.00195272 273 0 1.01722e+08 0.0265397 874618 1.02207e+08 5.57175e+06 24298 5.07026e+07 0 0.17626 0.995252 0.793119 1.01722e+08 0.00294902 2.24618e+07 7.91033e+06 2.27829e+07 324 2.27231e+07 1.64555e+07 0.00245022 2.26419e+07 49.9106 0.00855732 0.996559 0 50.3549 GTEX-1L5NE-0826-SM-DHXKU 1 B1 2 pieces, minimal fat. Islets well-preserved, rep encircled. 6.4 Pancreas Pancreas 0001150 105 482 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.99404 155232 0.981092 0.994943 0.860017 19710 1 76 0.00230957 86 0 5.09512e+07 0.0187667 308804 5.12102e+07 2.84834e+06 19725 2.54041e+07 0 0.121075 0.994943 0.855668 5.09512e+07 0.00258528 1.17163e+07 1.05787e+07 1.19202e+07 96 1.19003e+07 1.40322e+07 0.0024473 1.17788e+07 49.7435 0.00603013 0.995847 0 50.4314 GTEX-1L5NE-0926-SM-D4P3P 1 B1 2 pieces, no abnormalities 6.6 Spleen Spleen 0002106 107 480 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99208 267925 0.964249 0.993381 0.793317 24390 1 76 0.00293725 273 0 9.84713e+07 0.0343081 869384 9.91275e+07 1.13019e+07 24424 4.89981e+07 0 0.170932 0.993381 0.788065 9.84713e+07 0.00440252 2.15966e+07 1.36095e+07 2.17774e+07 297 2.17252e+07 1.43637e+07 0.00366893 2.1767e+07 50.0481 0.00877037 0.994681 0 50.2085 GTEX-1L5NE-1026-SM-D3LAP 1 B1 2 pieces, glandular hyperplastic pattern 7.5 Prostate Prostate 0002367 108 479 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990845 284438 0.971971 0.992975 0.801938 24781 1 76 0.0026496 170 0 8.35737e+07 0.0275968 442977 8.4165e+07 8.6087e+06 24816 4.15909e+07 0 0.170034 0.992975 0.796304 8.35737e+07 0.00378275 1.83805e+07 6.7971e+06 1.8576e+07 202 1.85672e+07 1.37248e+07 0.00321496 1.85583e+07 49.988 0.0052632 0.995105 0 50.2645 GTEX-1L5NE-1126-SM-D3L9P 0 B1 6 pieces, no dermal fat; squamous epithelium is ~40 microns 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 110 477 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991339 269833 0.972475 0.993561 0.82117 24004 1 76 0.00248604 201 0 8.31031e+07 0.0272899 1.39071e+06 8.36417e+07 8.43483e+06 24024 4.13717e+07 0 0.151305 0.993561 0.815883 8.31031e+07 0.0038603 1.8327e+07 9.19662e+06 1.85734e+07 213 1.85355e+07 1.35297e+07 0.00317164 1.85387e+07 50.0044 0.016627 0.995784 0 50.3339 GTEX-1L5NE-1226-SM-D3L9Q 1 B1 6 pieces, confirmed target muscularis 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 117 470 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992702 465185 0.978742 0.994538 0.857501 23946 1 76 0.00239977 384 0 1.14308e+08 0.0209088 956278 1.14935e+08 1.13388e+07 23968 5.69263e+07 0 0.121241 0.994538 0.852817 1.14308e+08 0.00339842 2.50059e+07 9.25508e+06 2.53118e+07 346 2.53067e+07 2.19753e+07 0.00289818 2.52018e+07 49.8961 0.00832013 0.996374 0 50.304 GTEX-1L5NE-1326-SM-CY8II 1 B1 6 pieces, confirmed target muscularis 8 Esophagus Esophagus - Muscularis 0004648 121 466 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.99004 396171 0.976842 0.992167 0.840144 21905 1 76 0.00454588 176 0 7.9586e+07 0.0229293 1.27363e+06 8.02143e+07 9.56324e+06 21925 3.96024e+07 0 0.136698 0.992167 0.833563 7.9586e+07 0.00735852 1.73919e+07 7.29351e+06 1.75654e+07 191 1.75569e+07 1.26055e+07 0.00594918 1.75555e+07 49.9979 0.0158778 0.994293 0 50.2482 GTEX-1L5NE-1426-SM-DHXKV 1 B1 6 pieces, squamous mucosa up to ~0.6mm, ~20-30% thickness 9.6 Esophagus Esophagus - Mucosa 0006920 122 465 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992474 465946 0.978504 0.993024 0.852293 21895 1 76 0.00318023 282 0 1.078e+08 0.0208979 556853 1.08558e+08 1.27673e+07 21913 5.37196e+07 0 0.126211 0.993024 0.846348 1.078e+08 0.00315496 2.43017e+07 2.02345e+07 2.44835e+07 281 2.44638e+07 2.43507e+07 0.0031676 2.43795e+07 49.9137 0.00512956 0.993574 0 50.1864 GTEX-1L5NE-1526-SM-DIPFW 1 B1 6 pieces, mucosa well preserved, up to~ 1mm, ~25% of thickness 7.5 Stomach Stomach 0000945 123 464 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.994084 344265 0.977884 0.995071 0.843795 23259 1 76 0.00195201 278 0 1.0356e+08 0.0218737 866302 1.04073e+08 6.72337e+06 23281 5.1646e+07 0 0.134089 0.995071 0.839636 1.0356e+08 0.00294624 2.27462e+07 9.61505e+06 2.29408e+07 322 2.29076e+07 1.92009e+07 0.00244863 2.28734e+07 49.9626 0.008324 0.996059 0 50.213 GTEX-1L5NE-1626-SM-DHXKW 1 B1 2 pieces, spermatogenesis is present but appears reduced 7.2 Testis Testis 0000473 126 461 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992801 574274 0.937703 0.993533 0.761691 33402 1 76 0.00222336 286 0 1.05177e+08 0.0619472 1.24895e+06 1.05862e+08 5.5928e+06 33476 5.24171e+07 0 0.176012 0.993533 0.756765 1.05177e+08 0.00243879 2.20057e+07 1.3543e+07 2.21308e+07 268 2.21627e+07 1.88422e+07 0.002331 2.20377e+07 49.8586 0.0117979 0.994264 0 50.1417 GTEX-1L5NE-1726-SM-DHXKX 1 B1 2 pieces, vascular elements/fascia are ~1015% of tissue, rep. delineated 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 128 459 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.995282 336306 0.979889 0.996011 0.854194 22432 1 76 0.00208536 277 0 8.58547e+07 0.0198587 943019 8.61986e+07 4.62160e+06 22454 4.27951e+07 0 0.125695 0.996011 0.850787 8.58547e+07 0.00262124 1.88875e+07 7.68511e+06 1.9213e+07 262 1.91033e+07 1.50694e+07 0.0023531 1.90531e+07 49.9341 0.0109401 0.99674 0 50.4271 GTEX-1L5NE-1826-SM-EV79T 1 B1 6 pieces, target lymphoid aggregates are ~10% of tissue 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 129 458 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989138 230596 0.97394 0.990199 0.829065 24800 1 76 0.00251549 275 0 9.71267e+07 0.0253502 1.05385e+06 9.80881e+07 1.03047e+07 24830 4.83785e+07 0 0.144876 0.990199 0.820939 9.71267e+07 0.003845 2.15178e+07 9.88962e+06 2.17302e+07 317 2.16488e+07 1.56051e+07 0.00317954 2.16909e+07 50.0485 0.0107439 0.99126 0 50.2455 GTEX-1L5NE-1926-SM-D3L9R 1 B1 6 pieces, confirmed target muscularis 8.2 Colon Colon - Sigmoid 0001159 130 457 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992148 497296 0.979363 0.994316 0.876879 21381 1 76 0.00235582 219 0 8.93837e+07 0.0203202 915590 8.98947e+07 8.72156e+06 21393 4.44893e+07 0 0.102484 0.994316 0.871894 8.93837e+07 0.00373665 1.94777e+07 7.17873e+06 1.96442e+07 244 1.96442e+07 1.74646e+07 0.00304473 1.96562e+07 50.0152 0.0101851 0.996484 0 50.2128 GTEX-1L5NE-2026-SM-CXZKR 1 B1 6 pieces, target mucosa well-preserved, ~10-20% of thickness 6.1 Colon Colon - Transverse 0001157 134 453 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993823 190370 0.974891 0.995146 0.814111 23711 1 76 0.00213841 372 0 9.6014e+07 0.0247815 3.66078e+06 9.64824e+07 6.11635e+06 23742 4.78531e+07 0 0.16078 0.995146 0.810159 9.6014e+07 0.00289872 2.10335e+07 1.34596e+07 2.18728e+07 363 2.17535e+07 9.14755e+06 0.00251806 2.12576e+07 49.4235 0.0379425 0.996468 0 50.9781 GTEX-1L5NE-2126-SM-CY8IH 0 B1 2 pieces, fibroadipose elements. Minute incidental soft tissue calcospherule noted, encircled. 8.1 Breast Breast - Mammary Tissue 0008367 136 451 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.991102 350446 0.982075 0.992994 0.853536 21748 1 76 0.00445635 277 0 9.56775e+07 0.01764 1.40175e+06 9.63525e+07 1.16033e+07 21762 4.76401e+07 0 0.128539 0.992994 0.847556 9.56775e+07 0.00720047 2.11474e+07 9.17271e+06 2.1397e+07 263 2.14063e+07 1.67693e+07 0.00582579 2.13031e+07 49.8792 0.0145481 0.994886 0 50.2933 GTEX-1L5NE-2226-SM-CXZKS 0 B1 2 pieces, interstitial fat/vascular elements are ~10% of tissue, rep delineated 8.5 Muscle Muscle - Skeletal 0011907 145 442 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.994518 238772 0.986867 0.995764 0.896623 19004 1 76 0.0016957 380 0 1.15318e+08 0.0128963 3.50219e+06 1.15808e+08 6.92566e+06 19010 5.75034e+07 0 0.0902446 0.995764 0.892825 1.15318e+08 0.00260985 2.49716e+07 1.45081e+07 2.55273e+07 356 2.54346e+07 2.23945e+07 0.0021522 2.51792e+07 49.7477 0.0302413 0.997011 0 50.5502 GTEX-1L5NE-2426-SM-E6CID 0 B1 2 pieces, trace nubbin of adherent fat, ~1mm, delineated 7.1 Nerve Nerve - Tibial 0001323 147 440 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993509 183179 0.974837 0.994547 0.78676 23493 1 76 0.00192539 224 0 8.93309e+07 0.0248255 354821 8.98207e+07 5.6445e+06 23526 4.45083e+07 0 0.188077 0.994547 0.78247 8.93309e+07 0.00237351 1.97507e+07 6.95769e+06 1.99092e+07 249 1.98133e+07 1.60382e+07 0.00214922 1.99303e+07 50.1472 0.00395033 0.995585 0 50.1999 GTEX-1L5NE-2526-SM-E6CIE 0 B1 6 pieces, adherent dermal fat up to ~1mm rep delineated; squamous epithelium is ~50 microns 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 150 437 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993745 152524 0.977189 0.994833 0.769797 22000 1 76 0.00184286 241 0 8.97756e+07 0.0226054 698200 9.02419e+07 5.56764e+06 22026 4.47402e+07 0 0.207392 0.994833 0.765819 8.97756e+07 0.00235702 1.95415e+07 8.2866e+06 1.96794e+07 244 1.95998e+07 1.60307e+07 0.00209966 1.97044e+07 50.1331 0.00773698 0.995921 0 50.1757 GTEX-1L5NE-2626-SM-E9U6P 0 B1 2 pieces, fascia/vascular elements are ~20% of tissue, rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 149 438 BP-83440 RNA Extraction from Paxgene-derived Lysate Plate Based 02/22/2017 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989487 236175 0.974766 0.990425 0.787817 22048 1 76 0.00176661 164 0 7.43943e+07 0.0249745 1.02829e+06 7.51135e+07 3.10086e+06 22073 3.70823e+07 0 0.186948 0.990425 0.780273 7.43943e+07 0.00267489 1.64314e+07 8.05613e+06 1.65511e+07 184 1.65177e+07 1.17313e+07 0.00222032 1.65327e+07 50.0228 0.0136899 0.991362 0 50.1815 GTEX-1L5NE-5001-SM-AN48J B1 Heart Heart - Left Ventricle 0006566 96 ChIP-Seq GTEX-1L5NE-5016-SM-AN48K B1 Muscle Muscle - Skeletal 0011907 145 ChIP-Seq GTEX-1LB8K-0003-SM-DE1NH B1 Blood Whole Blood 0013756 582 BP-62252 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/03/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LB8K-0003-SM-DJWWI B1 Blood Whole Blood 0013756 582 BP-62252 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/03/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LB8K-0005-SM-DIPED B1 8.4 Blood Whole Blood 0013756 582 BP-62263 RNA isolation_PAXgene Blood RNA (Manual) 04/03/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.97267 469239 0.983488 0.97411 0.810693 18916 1 76 0.00242558 156 0 1.09736e+08 0.0158437 311832 1.12652e+08 8.57672e+06 18923 5.461e+07 0 0.172794 0.97411 0.789704 1.09736e+08 0.00344143 2.56589e+07 1.47328e+08 2.58172e+07 190 2.58993e+07 2.84776e+07 0.00293275 2.57451e+07 49.8507 0.00276809 0.975549 0 50.1538 GTEX-1LB8K-0011-R1b-SM-EZ6MV B1, A1 7.1 Brain Brain - Hippocampus 0001954 651 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989517 310066 0.967783 0.991025 0.840669 24360 1 76 0.00266744 281 0 1.0677e+08 0.0318974 5.22823e+06 1.07737e+08 8.09007e+06 24387 5.3206e+07 0 0.127114 0.991025 0.833125 1.0677e+08 0.00372054 2.35878e+07 1.29752e+07 2.39801e+07 319 2.38469e+07 1.27739e+07 0.00319319 2.38525e+07 50.0059 0.0485278 0.992534 0 50.4124 GTEX-1LB8K-0011-R2a-SM-EZ6MQ B1, A1 5.9 Brain Brain - Substantia nigra 0002038 651 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987112 201717 0.95761 0.988585 0.835961 22305 1 76 0.00257132 296 0 9.63717e+07 0.0422019 9.77222e+06 9.74845e+07 6.77868e+06 22325 4.80355e+07 0 0.121649 0.988585 0.826419 9.63717e+07 0.00378251 2.11604e+07 1.136e+07 2.16043e+07 316 2.13034e+07 8.98581e+06 0.00317602 2.15754e+07 50.3171 0.100244 0.990058 0 50.519 GTEX-1LB8K-0011-R6a-SM-EXURT B1, A1 5.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 651 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989013 366356 0.976278 0.990262 0.8696 21001 1 76 0.00222553 367 0 7.98259e+07 0.0235817 1.06333e+07 8.06109e+07 2.07552e+06 21013 3.97464e+07 0 0.106679 0.990262 0.861132 7.98259e+07 0.00282548 1.75359e+07 1.75156e+07 1.81833e+07 360 1.79034e+07 4.89592e+06 0.00252513 1.78805e+07 49.968 0.131909 0.99151 0 50.9062 GTEX-1LB8K-0011-R9a-SM-EZ6MP B1, A1 6.9 Brain Brain - Spinal cord (cervical c-1) 0006469 651 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98366 152935 0.961019 0.985208 0.844852 22498 1 76 0.00258281 287 0 8.82748e+07 0.038772 7.19743e+06 8.96002e+07 6.32026e+06 22515 4.39974e+07 0 0.116167 0.985208 0.832355 8.82748e+07 0.00368752 1.95552e+07 1.10014e+07 1.98864e+07 286 1.96369e+07 7.69498e+06 0.0031343 1.99103e+07 50.3456 0.0803283 0.986755 0 50.4198 GTEX-1LB8K-0126-SM-EVYCN 1 B1 2 pieces; 2% internal fat 8 Muscle Muscle - Skeletal 0011907 812 919 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994422 395421 0.985769 0.994966 0.885777 19581 1 76 0.00171455 269 0 1.05201e+08 0.0139133 1.13189e+06 1.05733e+08 3.7711e+06 19589 5.24691e+07 0 0.099992 0.994966 0.881318 1.05201e+08 0.00268765 2.26927e+07 1.05402e+07 2.29966e+07 305 2.29018e+07 2.23218e+07 0.00220084 2.28294e+07 49.9209 0.0107052 0.99551 0 50.3326 GTEX-1LB8K-0226-SM-EWRNW 1 B1 6 pieces; intradermal nevus in 2 of 6 pieces [labeled]; well trimmed; 1% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 812 919 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984685 324812 0.97293 0.988559 0.794624 24473 1 76 0.00250906 327 0 1.02228e+08 0.0266963 362549 1.03411e+08 7.16439e+06 24510 5.08047e+07 0 0.178306 0.988559 0.785533 1.02228e+08 0.00355978 2.17979e+07 1.24853e+07 2.20257e+07 308 2.21433e+07 1.80054e+07 0.00302008 2.20316e+07 49.8736 0.0035059 0.992433 0 50.2598 GTEX-1LB8K-0326-SM-E9TJC 1 B1 2 pieces; 1 piece has 70% fat, 30% fibrous content; other piece has 40% fat, 60% fibrous dermis with sweat glands [arrowed] 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 813 918 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985072 376036 0.972805 0.986854 0.788535 23429 1 76 0.00216488 155 0 7.02796e+07 0.0268577 228763 7.12158e+07 3.26992e+06 23453 3.49539e+07 0 0.18427 0.986854 0.778169 7.02796e+07 0.00288962 1.53752e+07 5.6915e+06 1.55159e+07 159 1.55181e+07 1.27596e+07 0.0025266 1.54905e+07 49.9556 0.00321225 0.988636 0 50.2278 GTEX-1LB8K-0426-SM-EWRNX 1 B1 2 pieces; minimal intimal thickening; several small calcium deposits in media; well trimmed 7.2 Blood Vessel Artery - Tibial 0007610 816 915 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985014 342891 0.97524 0.988576 0.83254 22225 1 76 0.00246093 279 0 1.07911e+08 0.0243418 541140 1.09158e+08 7.47493e+06 22249 5.36297e+07 0 0.1427 0.988576 0.82303 1.07911e+08 0.00314813 2.29091e+07 8.31128e+06 2.32057e+07 314 2.32626e+07 2.07714e+07 0.00279526 2.31881e+07 49.9198 0.0049574 0.992139 0 50.3215 GTEX-1LB8K-0526-SM-E6CIT 1 B1 2 pieces; 30% external fat 6.4 Nerve Nerve - Tibial 0001323 817 914 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991709 232102 0.967765 0.992865 0.730328 24410 1 76 0.00219381 175 0 8.52738e+07 0.0319097 379332 8.58865e+07 5.22074e+06 24451 4.2457e+07 0 0.237437 0.992865 0.725117 8.52738e+07 0.00282894 1.87067e+07 7.47076e+06 1.88775e+07 194 1.87786e+07 1.27349e+07 0.00251101 1.88934e+07 50.1524 0.00441666 0.994021 0 50.2272 GTEX-1LB8K-0626-SM-D4P3Z 2 B1 2 pieces; minute 0.3mm lymphoid or parathyroid focus 6.9 Thyroid Thyroid 0002046 818 913 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993376 223317 0.969121 0.994511 0.666655 24967 1 76 0.0025357 201 0 9.72993e+07 0.0305703 397398 9.78363e+07 9.9973e+06 25029 4.84764e+07 0 0.302466 0.994511 0.662996 9.72993e+07 0.00381919 2.14298e+07 9.90529e+06 2.14977e+07 204 2.14937e+07 1.24225e+07 0.00317671 2.15403e+07 50.0541 0.00406187 0.995645 0 50.079 GTEX-1LB8K-0726-SM-D5OV2 1 B1 6 pieces; 10% dermal fat; well trimmed 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 819 912 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.990348 226882 0.971686 0.99203 0.770324 23246 1 76 0.00409762 180 0 7.66589e+07 0.0280964 223333 7.72748e+07 1.00257e+07 23273 3.81675e+07 0 0.201362 0.99203 0.764185 7.66589e+07 0.00479433 1.66539e+07 8.52127e+06 1.67925e+07 161 1.67951e+07 1.27009e+07 0.00444538 1.67717e+07 49.9652 0.00289012 0.993713 0 50.2073 GTEX-1LB8K-0826-SM-D4P41 1 B1 2 pieces; slight pulmonary edema; scattered alveolar macrophages 6.4 Lung Lung 0008952 820 911 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99304 155262 0.971083 0.994058 0.708076 24611 1 76 0.00282662 162 0 8.57548e+07 0.0286058 343621 8.62674e+07 1.03622e+07 24651 4.27036e+07 0 0.263007 0.994058 0.703869 8.57548e+07 0.00368045 1.88862e+07 7.98783e+06 1.89714e+07 182 1.89298e+07 1.16845e+07 0.0032531 1.9013e+07 50.1097 0.00398321 0.995075 0 50.1126 GTEX-1LB8K-0926-SM-D4P42 1 B1 3 pieces; 1 with 7x1.4mm external fat; 7 Heart Heart - Atrial Appendage 0006631 824 907 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994228 281474 0.976691 0.995459 0.764948 23413 1 76 0.00244016 270 0 1.05924e+08 0.023024 1.39149e+06 1.06407e+08 1.23842e+07 23453 5.27899e+07 0 0.211743 0.995459 0.761475 1.05924e+08 0.00378858 2.27847e+07 9.18537e+06 2.30441e+07 293 2.30227e+07 1.67453e+07 0.00311353 2.29244e+07 49.893 0.0130771 0.99669 0 50.2829 GTEX-1LB8K-1026-SM-DHXJJ 1 B1 2 pieces; no acute changes; enlarged nuclei; slight increase in interstitial fibrous tissue 5.8 Heart Heart - Left Ventricle 0006566 825 906 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.99348 158798 0.986334 0.994471 0.869781 20428 1 76 0.00273822 262 0 8.98058e+07 0.0135767 5.72797e+06 9.03051e+07 4.80487e+06 20440 4.47821e+07 0 0.116553 0.994471 0.864972 8.98058e+07 0.00311415 1.98426e+07 2.08074e+07 2.05225e+07 309 2.04124e+07 5.61572e+06 0.00292599 2.00129e+07 49.5059 0.0634291 0.995462 0 50.8422 GTEX-1LB8K-1126-SM-DIPEP 1 B1 6 pieces; well trimmed; plaque free 6.3 Blood Vessel Artery - Aorta 0001496 830 901 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.991739 294700 0.972715 0.992871 0.780137 22635 1 76 0.00245896 210 0 9.38698e+07 0.0268938 279598 9.45438e+07 7.51384e+06 22664 4.67354e+07 0 0.192578 0.992871 0.774575 9.38698e+07 0.00351782 2.02389e+07 8.00004e+06 2.03264e+07 222 2.03e+07 1.61175e+07 0.00298779 2.03697e+07 50.0857 0.00295734 0.994002 0 50.1078 GTEX-1LB8K-1326-SM-CXZKB 1 B1 6 pieces; squamous hyperplasia consistent with reflux; several small subepithelial lymphoid collections; partially sloughed epithelium 6.4 Esophagus Esophagus - Mucosa 0006920 838 893 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993286 191921 0.972054 0.994586 0.826348 21245 1 76 0.00228163 197 0 7.71412e+07 0.0277565 1.07807e+06 7.75611e+07 5.33532e+06 21258 3.84409e+07 0 0.145706 0.994586 0.821874 7.71412e+07 0.00309157 1.71849e+07 9.46056e+06 1.76322e+07 223 1.75701e+07 9.9514e+06 0.00268607 1.73462e+07 49.6795 0.0138996 0.995887 0 50.6424 GTEX-1LB8K-1426-SM-DHXJK 1 B1 6 pieces; well dissected 5.6 Esophagus Esophagus - Muscularis 0004648 840 891 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994177 286048 0.97029 0.994805 0.794107 22019 1 76 0.00247921 134 0 6.6607e+07 0.0294926 1.13982e+06 6.69548e+07 4.12114e+06 22035 3.31783e+07 0 0.176183 0.994805 0.789982 6.6607e+07 0.00279492 1.4334e+07 7.82052e+06 1.45697e+07 160 1.44951e+07 9.57266e+06 0.00263697 1.44528e+07 49.927 0.0170237 0.995434 0 50.4076 GTEX-1LB8K-1526-SM-E9U58 1 B1 6 pieces; minute submucosal gland 0.3 mm [labeled]; 25% fat in 1 pair 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 841 890 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.975816 138775 0.971303 0.976707 0.79772 21991 1 76 0.00210105 158 0 7.03338e+07 0.028498 1.71237e+06 7.20112e+07 3.20013e+06 22015 3.50403e+07 0 0.173583 0.976707 0.779138 7.03338e+07 0.00312437 1.53354e+07 6.11358e+06 1.55061e+07 187 1.54098e+07 8.78100e+06 0.00261224 1.54899e+07 50.1296 0.0237792 0.977598 0 50.2768 GTEX-1LB8K-2326-SM-DHXJL 1 B1 2 pieces; active spermatogenesis 6 Testis Testis 0000473 857 874 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992471 571044 0.92007 0.993261 0.72181 34676 1 76 0.0023658 294 0 1.18092e+08 0.0795682 934367 1.18893e+08 6.49239e+06 34754 5.88612e+07 0 0.19826 0.993261 0.716945 1.18092e+08 0.00268426 2.38853e+07 1.87761e+07 2.41718e+07 294 2.42007e+07 1.90608e+07 0.0025249 2.39366e+07 49.7257 0.00785889 0.99405 0 50.298 GTEX-1LB8K-2526-SM-DIPEQ 1 B1 6 pieces; generally well dissected except for a 0.6mm remnant of mucosa [labeled] 6.2 Colon Colon - Sigmoid 0001159 864 867 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993408 360341 0.974611 0.994463 0.794516 22626 1 76 0.002321 276 0 1.02398e+08 0.0251631 1.1549e+06 1.02968e+08 7.89338e+06 22655 5.10217e+07 0 0.180094 0.994463 0.790117 1.02398e+08 0.00323034 2.21321e+07 8.09241e+06 2.22803e+07 290 2.22361e+07 1.66215e+07 0.00277519 2.22823e+07 50.0519 0.0112161 0.995517 0 50.1669 GTEX-1LB8K-2926-SM-EVR4X 1 B1 1 piece; all adenohypophysis 6.6 Pituitary Pituitary 0000007 909 822 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987816 197040 0.96466 0.990036 0.75058 25792 1 76 0.00226176 204 0 8.32015e+07 0.0351075 804841 8.40389e+07 6.0768e+06 25839 4.14067e+07 0 0.21408 0.990036 0.743102 8.32015e+07 0.00377274 1.78468e+07 9.89942e+06 1.80109e+07 214 1.80003e+07 1.14001e+07 0.00301556 1.80245e+07 50.0335 0.009577 0.992255 0 50.2287 GTEX-1LB8K-3126-SM-E9U57 1 B1 4 pieces; outer, convex edges appear pale: possible artifact (not seen in cerebellum) 5.8 Brain Brain - Cortex 0001870 912 819 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 EXCLUDE 0.979692 328484 0.955917 0.980673 0.788845 22584 1 76 0.00192699 212 0 7.72185e+07 0.0438682 3.08906e+06 7.87403e+07 3.44751e+06 22612 3.84747e+07 0 0.167072 0.980673 0.7736 7.72185e+07 0.00289633 1.68585e+07 1.02169e+07 1.72154e+07 217 1.6983e+07 9.0487e+06 0.00241117 1.7163e+07 50.2636 0.039231 0.981654 0 50.5237 GTEX-1LBAC-0004-SM-DE1KR B1 Blood Whole Blood 0013756 -180 BP-62252 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/03/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LBAC-0004-SM-DJWYD B1 Blood Whole Blood 0013756 -180 BP-62252 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/03/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LBAC-0005-SM-DIPEE B1 9.2 Blood Whole Blood 0013756 -180 BP-62263 RNA isolation_PAXgene Blood RNA (Manual) 04/03/2015 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.984264 501298 0.976988 0.985292 0.81556 18889 1 76 0.0024061 144 0 1.00956e+08 0.0223106 168238 1.02463e+08 6.64789e+06 18896 5.02718e+07 0 0.161428 0.985292 0.803565 1.00956e+08 0.00321981 2.36609e+07 1.33331e+08 2.37394e+07 169 2.38045e+07 2.76981e+07 0.00281253 2.37117e+07 49.9024 0.00164194 0.986319 0 50.0829 GTEX-1LBAC-0126-SM-DIPEZ 0 B1 6 pieces; includes variable internal/external fat up to ~15%, epidermis measures 38 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 324 1217 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992772 383429 0.977273 0.994043 0.830069 23657 1 76 0.0023258 408 0 1.09125e+08 0.0224738 1.42024e+06 1.09779e+08 8.00368e+06 23682 5.43955e+07 0 0.147204 0.994043 0.825125 1.09125e+08 0.00360759 2.37323e+07 1.30376e+07 2.38554e+07 346 2.38507e+07 2.03424e+07 0.00296588 2.387e+07 50.0202 0.0129372 0.995314 0 50.1293 GTEX-1LBAC-0226-SM-DHXJZ 0 B1 2 pieces; ~10% fibrous component 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 326 1215 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994497 358635 0.978862 0.99537 0.81161 23171 1 76 0.00235023 214 0 8.74389e+07 0.0208483 825977 8.78456e+07 4.71073e+06 23193 4.35806e+07 0 0.167253 0.99537 0.807852 8.74389e+07 0.00280857 1.92934e+07 7.62096e+06 1.95432e+07 218 1.95285e+07 1.65742e+07 0.0025792 1.93809e+07 49.8104 0.0094026 0.996243 0 50.3215 GTEX-1LBAC-0326-SM-DIPF1 1 B1 2 pieces (fragmented); includes <10% fat 8.3 Muscle Muscle - Skeletal 0011907 332 1209 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993846 538464 0.984193 0.995001 0.881674 19916 1 76 0.00231883 380 0 1.20538e+08 0.015563 3.26231e+06 1.21144e+08 9.67564e+06 19927 6.00904e+07 0 0.102519 0.995001 0.877267 1.20538e+08 0.00313764 2.6205e+07 1.42616e+07 2.65696e+07 336 2.66079e+07 2.48188e+07 0.00272776 2.62875e+07 49.6971 0.0269292 0.996157 0 50.3455 GTEX-1LBAC-0426-SM-DKPQJ 1 B1 2 pieces; includes partial rim of fat (~10%) 6.8 Nerve Nerve - Tibial 0001323 335 1206 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992266 276518 0.962763 0.993914 0.737016 24803 1 76 0.00310778 224 0 9.76712e+07 0.0369455 445402 9.82693e+07 1.05869e+07 24847 4.86405e+07 0 0.225748 0.993914 0.73253 9.76712e+07 0.00291978 2.13933e+07 1.02617e+07 2.14785e+07 247 2.14836e+07 1.47108e+07 0.00301394 2.15387e+07 50.064 0.00453246 0.995561 0 50.0994 GTEX-1LBAC-0526-SM-D3L9S 1 B1 2 pieces; includes attachment of fat/fibrous tissue/vessels from 30-60% 8 Blood Vessel Artery - Tibial 0007610 336 1205 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991342 229776 0.97879 0.993495 0.868041 21651 1 76 0.00263726 180 0 8.1784e+07 0.0208021 439101 8.23195e+07 8.41497e+06 21663 4.06985e+07 0 0.110749 0.993495 0.862394 8.1784e+07 0.00361222 1.7668e+07 6.25302e+06 1.78225e+07 202 1.77977e+07 1.66589e+07 0.00312368 1.78624e+07 50.0907 0.00533411 0.995649 0 50.2176 GTEX-1LBAC-0626-SM-D3L9T 0 B1 2 pieces; salivary gland elements with minimal attached stroma 8 Salivary Gland Minor Salivary Gland 0006330 333 1208 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.986741 431300 0.971259 0.988697 0.804207 24572 1 76 0.00344889 382 0 1.17467e+08 0.0256034 323954 1.1881e+08 1.18064e+07 24610 5.8298e+07 0 0.167053 0.988697 0.795117 1.17467e+08 0.00432467 2.65991e+07 3.44347e+07 2.6967e+07 335 2.70454e+07 1.94331e+07 0.00388591 2.67358e+07 49.7122 0.00272665 0.990652 0 50.3434 GTEX-1LBAC-0726-SM-D3L9U 0 B1 2 pieces 7.4 Thyroid Thyroid 0002046 338 1203 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991773 470686 0.959158 0.993643 0.717237 26161 1 76 0.00282365 275 0 1.17579e+08 0.0405487 323609 1.18331e+08 1.16086e+07 26229 5.85414e+07 0 0.241921 0.993643 0.712678 1.17579e+08 0.00385878 2.54578e+07 1.18202e+07 2.56265e+07 298 2.56863e+07 1.77991e+07 0.00334024 2.55942e+07 49.9102 0.00273477 0.995514 0 50.1651 GTEX-1LBAC-0826-SM-CY8IJ 0 B1 6 pieces; includes <10% internal/external fat 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 344 1197 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.989089 291526 0.969941 0.991405 0.786275 23563 1 76 0.0048537 158 0 7.48732e+07 0.0298906 656644 7.55223e+07 8.66890e+06 23590 3.72466e+07 0 0.183666 0.991405 0.779518 7.48732e+07 0.00810887 1.64658e+07 8.91838e+06 1.66283e+07 165 1.66127e+07 1.09114e+07 0.00647748 1.66484e+07 50.0537 0.0086947 0.993722 0 50.2454 GTEX-1LBAC-0926-SM-CXKY9 1 B1 2 pieces; predominantly fat with 15-40% stroma, no ductal elements in this section 7.4 Breast Breast - Mammary Tissue 0008367 347 1194 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.986925 252109 0.977999 0.989517 0.851652 23042 1 76 0.00764447 157 0 8.47573e+07 0.0217141 532785 8.56552e+07 1.56362e+07 23057 4.21101e+07 0 0.126346 0.989517 0.842725 8.47573e+07 0.0119174 1.84885e+07 8.46272e+06 1.8733e+07 173 1.87099e+07 1.52084e+07 0.00977535 1.87214e+07 50.0153 0.00622011 0.992108 0 50.3285 GTEX-1LBAC-1026-SM-CXKYA 1 B1 2 pieces; mature fat 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 350 1191 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.98526 247035 0.976868 0.988302 0.83672 23311 1 76 0.00716572 151 0 8.32849e+07 0.0228879 672521 8.42706e+07 1.34738e+07 23334 4.13797e+07 0 0.140147 0.988302 0.826933 8.32849e+07 0.0122686 1.81649e+07 8.28295e+06 1.83715e+07 173 1.83593e+07 1.34894e+07 0.00970928 1.84139e+07 50.0742 0.00798049 0.991345 0 50.2828 GTEX-1LBAC-1126-SM-D3L9V 0 B1 6 pieces; target muscularis with few clusters of submucosal glands 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 355 1186 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992327 389170 0.974539 0.994154 0.833105 23221 1 76 0.00272464 279 0 9.68817e+07 0.0251824 768789 9.74514e+07 9.3343e+06 23249 4.82463e+07 0 0.141434 0.994154 0.828235 9.68817e+07 0.0037923 2.08045e+07 8.19684e+06 2.10597e+07 292 2.10176e+07 1.6556e+07 0.00325749 2.10043e+07 49.9841 0.00788895 0.995981 0 50.3048 GTEX-1LBAC-1226-SM-DHXK1 0 B1 6 pieces; includes several clusters of submucosal glands and few lymphoid aggregates 9.1 Esophagus Esophagus - Mucosa 0006920 359 1182 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992709 503063 0.976528 0.993404 0.830806 23735 1 76 0.00259818 284 0 1.08623e+08 0.022732 527522 1.09344e+08 5.73598e+06 23754 5.4124e+07 0 0.145722 0.993404 0.825326 1.08623e+08 0.00277521 2.44968e+07 1.5766e+07 2.46919e+07 296 2.47051e+07 2.19839e+07 0.00268663 2.45516e+07 49.8442 0.00482442 0.994098 0 50.1984 GTEX-1LBAC-1426-SM-CXZKT 1 B1 6 pieces; mucosa and submucosa 7.2 Stomach Stomach 0000945 370 1171 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.988358 241900 0.971736 0.989837 0.803747 24118 1 76 0.00319611 337 0 9.93635e+07 0.0260779 994385 1.00384e+08 6.81438e+06 24148 4.93794e+07 0 0.167989 0.989837 0.795579 9.93635e+07 0.00404616 2.22883e+07 5.59922e+07 2.27755e+07 294 2.28076e+07 1.79912e+07 0.0036205 2.23902e+07 49.5382 0.00990584 0.991317 0 50.5405 GTEX-1LBAC-1526-SM-CXZKU 1 B1 6 pieces; all include abundant lymphoid tissue 7.5 Small Intestine Small Intestine - Terminal Ileum 0001211 380 1161 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992392 295145 0.959458 0.993684 0.74302 25512 1 76 0.00263049 204 0 9.40412e+07 0.0398834 322322 9.46389e+07 6.43772e+06 25558 4.68323e+07 0 0.216438 0.993684 0.738328 9.40412e+07 0.00321667 2.04506e+07 1.05856e+07 2.07842e+07 213 2.07762e+07 1.43962e+07 0.0029232 2.05703e+07 49.751 0.00340581 0.994976 0 50.4046 GTEX-1LBAC-1626-SM-CXZKV 1 B1 6 pieces; full thickness sections 8 Colon Colon - Transverse 0001157 385 1156 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993166 328928 0.972463 0.994703 0.819039 23692 1 76 0.00217019 286 0 1.01679e+08 0.0272445 625618 1.02221e+08 6.345e+06 23713 5.06591e+07 0 0.153424 0.994703 0.8147 1.01679e+08 0.00304281 2.19208e+07 8.03261e+06 2.2298e+07 301 2.22605e+07 1.82559e+07 0.00260583 2.21016e+07 49.8209 0.00612027 0.99624 0 50.4266 GTEX-1LBAC-1726-SM-D3L9W 1 B1 6 pieces; target muscularis 8.2 Colon Colon - Sigmoid 0001159 391 1150 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992722 255806 0.974445 0.994504 0.840212 22706 1 76 0.00264563 218 0 8.66702e+07 0.0252632 581387 8.71492e+07 8.66733e+06 22726 4.31658e+07 0 0.134233 0.994504 0.835594 8.66702e+07 0.00376206 1.87536e+07 7.30189e+06 1.89088e+07 216 1.88808e+07 1.58468e+07 0.00320285 1.89214e+07 50.0536 0.00667117 0.996285 0 50.2061 GTEX-1LBAC-1826-SM-D3L9X 2 B1 2 pieces; active spermatogenesis 7.7 Testis Testis 0000473 394 1147 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.989349 753619 0.922832 0.991637 0.71061 35466 1 76 0.00272585 293 0 1.424e+08 0.0768015 1.06189e+06 1.43601e+08 1.4345e+07 35557 7.08652e+07 0 0.212222 0.991637 0.704668 1.424e+08 0.00390333 2.94196e+07 2.06803e+07 2.96037e+07 320 2.97733e+07 2.39295e+07 0.00331323 2.95264e+07 49.7918 0.00739474 0.993925 0 50.156 GTEX-1LBAC-1926-SM-DHXK2 1 B1 2 pieces; one piece includes portion of prostatic urethra 6.3 Prostate Prostate 0002367 397 1144 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992057 277574 0.962429 0.993042 0.768846 25491 1 76 0.00267056 273 0 9.42587e+07 0.0373829 829223 9.49192e+07 5.20475e+06 25533 4.69742e+07 0 0.193583 0.993042 0.763496 9.42587e+07 0.00332807 2.06122e+07 1.0606e+07 2.09739e+07 277 2.09117e+07 1.21037e+07 0.00299899 2.07581e+07 49.8156 0.0087361 0.994026 0 50.4349 GTEX-1LC46-0001-SM-DE1K7 B1 Blood Whole Blood 0013756 -126 BP-62276 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/06/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LC46-0001-SM-DJWX9 B1 Blood Whole Blood 0013756 -126 BP-62276 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/06/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1LC46-5001-SM-AN495 B1 Heart Heart - Left Ventricle 0006566 ChIP-Seq GTEX-1LC46-5004-SM-AN494 B1 Lung Lung 0008952 ChIP-Seq GTEX-1LC46-5019-SM-AN497 B1 Muscle Muscle - Skeletal 0011907 ChIP-Seq GTEX-1LC47-0002-SM-DE1NI B1 Blood Whole Blood 0013756 598 BP-62276 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/06/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LC47-0002-SM-DJWWJ B1 Blood Whole Blood 0013756 598 BP-62276 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/06/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LC47-0005-SM-COH2J B1 8.7 Blood Whole Blood 0013756 598 BP-62277 RNA isolation_PAXgene Blood RNA (Manual) 04/06/2015 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.973988 730943 0.972407 0.974998 0.810125 19666 1 76 0.00376151 195 0 1.12268e+08 0.0265116 446753 1.15146e+08 1.23885e+07 19674 5.58942e+07 0 0.162282 0.974998 0.789871 1.12268e+08 0.00428134 2.61044e+07 1.40816e+08 2.61741e+07 227 2.6206e+07 2.86215e+07 0.00402115 2.61899e+07 49.9846 0.00387987 0.976008 0 50.0666 GTEX-1LC47-0011-R10b-SM-EYYWE B1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 577 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.980751 265058 0.968881 0.985575 0.852373 21937 1 76 0.00245268 193 0 6.39278e+07 0.0309394 7.2541e+06 6.48635e+07 2.85067e+06 21950 3.17129e+07 0 0.116507 0.985575 0.840077 6.39278e+07 0.0042469 1.40242e+07 1.0354e+07 1.43856e+07 204 1.43054e+07 5.59374e+06 0.0033454 1.43602e+07 50.0956 0.111836 0.990399 0 50.6361 GTEX-1LC47-0011-R6b-SM-EZ6MI B1, A1 6.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 577 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.981765 345066 0.972651 0.983767 0.884177 21541 1 76 0.00278377 371 0 9.50707e+07 0.0272277 1.6203e+07 9.66394e+07 7.34409e+06 21551 4.73575e+07 0 0.0884741 0.983767 0.869825 9.50707e+07 0.00428589 2.10246e+07 2.23199e+07 2.1649e+07 338 2.13936e+07 6.88681e+06 0.0035333 2.14231e+07 50.0344 0.167665 0.985769 0 50.7316 GTEX-1LC47-0326-SM-E9TJP 0 B1 6 pieces; no dermal fat; squamous epithelium is ~30 microns. Notable dermal solar elastosis. 8 Skin Skin - Sun Exposed (Lower leg) 0004264 596 1004 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986652 309997 0.974651 0.988154 0.79034 23626 1 76 0.00211511 181 0 7.74106e+07 0.0251111 708162 7.83386e+07 3.17581e+06 23651 3.85417e+07 0 0.184311 0.988154 0.780977 7.74106e+07 0.00257306 1.70438e+07 6.94372e+06 1.71513e+07 176 1.71434e+07 1.43624e+07 0.00234374 1.71617e+07 50.0265 0.00903976 0.989655 0 50.1572 GTEX-1LC47-0526-SM-DKPQO 0 B1 2 pieces, minimal adherent fat 9.1 Nerve Nerve - Tibial 0001323 606 994 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991189 370487 0.968103 0.993271 0.738808 24818 1 76 0.00289967 288 0 1.04045e+08 0.0316251 442239 1.0475e+08 1.13521e+07 24871 5.17989e+07 0 0.229295 0.993271 0.733837 1.04045e+08 0.00307473 2.28747e+07 1.20188e+07 2.30596e+07 262 2.3113e+07 1.72361e+07 0.00298701 2.30279e+07 49.9078 0.00422184 0.995353 0 50.2013 GTEX-1LC47-0626-SM-DIPFE 0 B1 2 pieces, ~20% interstitial fat/vascular elements; rep delineated; adherent tendon fragment, ensquared 8.7 Muscle Muscle - Skeletal 0011907 610 990 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993969 547904 0.981452 0.995073 0.865971 21465 1 76 0.00208135 390 0 1.24433e+08 0.0182977 1.84508e+06 1.25049e+08 9.44902e+06 21486 6.20325e+07 0 0.11548 0.995073 0.861705 1.24433e+08 0.00286918 2.73286e+07 1.47386e+07 2.77281e+07 351 2.77797e+07 2.59166e+07 0.00247483 2.73984e+07 49.6545 0.0147549 0.996178 0 50.3628 GTEX-1LC47-1026-SM-D3LAH 0 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 624 976 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992738 284688 0.980456 0.994642 0.836903 21965 1 76 0.00256187 269 0 9.46822e+07 0.0193629 5.52602e+06 9.51922e+07 9.30677e+06 21979 4.71646e+07 0 0.143552 0.994642 0.83242 9.46822e+07 0.00353566 2.11018e+07 9.39857e+06 2.15257e+07 309 2.15471e+07 1.43356e+07 0.00304783 2.12485e+07 49.6511 0.0580512 0.996547 0 50.4972 GTEX-1LC47-1126-SM-D4P43 0 B1 2 pieces 6.5 Lung Lung 0008952 618 982 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99205 207224 0.971493 0.993346 0.724323 24591 1 76 0.00272735 161 0 8.83568e+07 0.028228 611362 8.89487e+07 1.17096e+07 24638 4.39987e+07 0 0.24717 0.993346 0.719503 8.83568e+07 0.00386666 1.95222e+07 1.32122e+07 1.96671e+07 181 1.96398e+07 1.38902e+07 0.00329626 1.96615e+07 50.0276 0.0068732 0.994642 0 50.1849 GTEX-1LC47-1226-SM-D4P44 0 B1 2 pieces, fibroadipose elements only; no ductal elements 6.3 Breast Breast - Mammary Tissue 0008367 635 965 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.99391 229660 0.975558 0.995106 0.792458 23318 1 76 0.00257174 210 0 9.18049e+07 0.0241793 1.11807e+06 9.22564e+07 1.1477e+07 23353 4.57543e+07 0 0.1831 0.995106 0.788579 9.18049e+07 0.00351745 2.02133e+07 9.7659e+06 2.05249e+07 236 2.04824e+07 1.47074e+07 0.00304403 2.03582e+07 49.848 0.0121191 0.996302 0 50.3825 GTEX-1LC47-1526-SM-CY8IB 1 B1 2 pieces; micro aggregates of polymorphonuclear leukocytes, delineated; vascular (rep encircled) and fascia elements are ~5-10% of tissue 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 644 956 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9769 09/18/2016 TruSeq.v1 EXCLUDE 0.989252 359837 0.975449 0.991267 0.739305 23234 1 76 0.00483027 152 0 8.33145e+07 0.0242286 797301 8.40485e+07 9.72143e+06 23260 4.14318e+07 0 0.236145 0.991267 0.732848 8.33145e+07 0.00790951 1.83254e+07 1.06839e+07 1.84064e+07 162 1.84167e+07 1.40543e+07 0.00636676 1.84823e+07 50.0889 0.0094862 0.993282 0 50.1103 GTEX-1LC47-1926-SM-DHXKJ 1 B1 6 pieces, confirmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 680 920 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991858 189160 0.968566 0.99275 0.794819 22857 1 76 0.00243794 156 0 7.20209e+07 0.0312706 3.6454e+06 7.25468e+07 3.85039e+06 22880 3.5881e+07 0 0.173747 0.99275 0.789057 7.20209e+07 0.00292268 1.57885e+07 8.16258e+06 1.60738e+07 192 1.59869e+07 8.64136e+06 0.00268009 1.59339e+07 49.9169 0.0502489 0.993642 0 50.4476 GTEX-1LC47-2026-SM-EV7AH 1 B1 6 pieces, confirmed target muscularis; trace 'contaminant' squamous mucosa, delineated 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 688 912 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 EXCLUDE 0.982118 212244 0.967755 0.983193 0.789384 23597 1 76 0.00241811 160 0 7.50079e+07 0.0320675 1.82714e+06 7.62902e+07 8.17992e+06 23619 3.73603e+07 0 0.178371 0.983193 0.776117 7.50079e+07 0.00394815 1.66778e+07 8.67208e+06 1.68808e+07 191 1.68035e+07 1.00377e+07 0.00318229 1.68384e+07 50.0519 0.0239498 0.984268 0 50.3025 GTEX-1LC47-2426-SM-DHXKK 3 B1 6 pieces, target mucosa up to ~0.3mm, complete mucosal glandular autolysis/sloughing 6.7 Salivary Gland Minor Salivary Gland 0006330 699 901 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992506 366432 0.968353 0.993576 0.760444 25049 1 76 0.00324717 229 0 9.36077e+07 0.0303365 1.05334e+06 9.42129e+07 9.54125e+06 25094 4.65718e+07 0 0.207908 0.993576 0.755559 9.36077e+07 0.00358374 2.09079e+07 1.38549e+07 2.11054e+07 252 2.10705e+07 1.39155e+07 0.00341527 2.10336e+07 49.9562 0.0111804 0.994645 0 50.2351 GTEX-1LC47-2926-SM-CXZKC 1 B1 2 pieces no abnormalities 6 Brain Brain - Cortex 0001870 773 827 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993078 634478 0.957059 0.994778 0.829154 23752 1 76 0.0022237 369 0 9.5298e+07 0.0427357 9.77599e+06 9.57983e+07 6.25147e+06 23767 4.74794e+07 0 0.127905 0.994778 0.824825 9.5298e+07 0.00318158 2.05517e+07 2.8975e+07 2.15233e+07 380 2.1428e+07 8.44653e+06 0.00270182 2.07974e+07 49.2533 0.102048 0.996479 0 51.1545 GTEX-1LG7Y-0001-SM-DE1KH B1 Blood Whole Blood 0013756 886 BP-62480 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LG7Y-0001-SM-DJWYK B1 Blood Whole Blood 0013756 886 BP-62480 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LG7Y-0005-SM-DKPQ7 B1 8.7 Blood Whole Blood 0013756 886 BP-62494 RNA isolation_PAXgene Blood RNA (Manual) 04/13/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.968066 556657 0.981413 0.970332 0.8033 19609 1 76 0.00255546 197 0 1.24954e+08 0.0171223 231574 1.28775e+08 1.3029e+07 19617 6.21168e+07 0 0.178113 0.970332 0.779468 1.24954e+08 0.0033552 2.91724e+07 1.8012e+08 2.94643e+07 241 2.94848e+07 3.43675e+07 0.00295439 2.94376e+07 49.9599 0.00179829 0.972597 0 50.2489 GTEX-1LG7Y-0011-R11a-SM-EXOIH B1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 899 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.990419 332010 0.954723 0.992372 0.775308 23096 1 76 0.00216765 200 0 7.91876e+07 0.0447213 946570 7.97963e+07 4.79589e+06 23127 3.9403e+07 0 0.179416 0.992372 0.769394 7.91876e+07 0.00317107 1.71894e+07 7.27692e+06 1.72631e+07 228 1.73111e+07 1.16804e+07 0.00266838 1.72785e+07 49.9529 0.0118623 0.994325 0 50.107 GTEX-1LG7Y-0011-R1a-SM-EYYWV B1, A1 5.8 Brain Brain - Hippocampus 0001954 899 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986815 219057 0.967624 0.989403 0.863908 22237 1 76 0.00217703 270 0 7.87647e+07 0.0321429 8.4042e+06 7.96082e+07 2.94947e+06 22246 3.91953e+07 0 0.103717 0.989403 0.854753 7.87647e+07 0.00301114 1.73142e+07 1.46906e+07 1.75933e+07 317 1.74744e+07 6.26029e+06 0.00259299 1.75946e+07 50.1715 0.10557 0.991992 0 50.3997 GTEX-1LG7Y-0011-R5a-SM-EZ6MU B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 899 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991736 477323 0.966499 0.99325 0.853963 24644 1 76 0.00232969 275 0 1.23385e+08 0.0330974 6.83259e+06 1.24224e+08 8.92326e+06 24669 6.14875e+07 0 0.112536 0.99325 0.848199 1.23385e+08 0.00341421 2.7031e+07 2.1133e+07 2.73234e+07 317 2.72564e+07 1.56827e+07 0.00287112 2.72627e+07 50.0058 0.0550021 0.994763 0 50.269 GTEX-1LG7Y-0126-SM-E6CJ8 0 B1 2 pieces, ~10% interstitial fat/vascular elements. 8.3 Muscle Muscle - Skeletal 0011907 1078 846 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993636 427213 0.987148 0.995224 0.885909 20273 1 76 0.00158425 276 0 1.34344e+08 0.0125563 928640 1.34989e+08 8.21532e+06 20285 6.69481e+07 0 0.101239 0.995224 0.881678 1.34344e+08 0.00234821 2.88761e+07 1.32943e+07 2.89879e+07 309 2.89789e+07 2.97203e+07 0.00196562 2.90636e+07 50.073 0.00687938 0.996812 0 50.0966 GTEX-1LG7Y-0226-SM-E9U5J 0 B1 2 pieces, trace adherent nubbins of adherent fat, up to ~0.4mm 5.6 Nerve Nerve - Tibial 0001323 1079 845 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.983139 210500 0.961971 0.984042 0.720548 24080 1 76 0.0019781 154 0 6.97644e+07 0.0377658 250225 7.08958e+07 3.28578e+06 24117 3.47483e+07 0 0.241423 0.984042 0.709049 6.97644e+07 0.00294975 1.52501e+07 7.14334e+06 1.53567e+07 160 1.53077e+07 9.59158e+06 0.00246348 1.5362e+07 50.0884 0.00352948 0.984945 0 50.1742 GTEX-1LG7Y-0326-SM-EYYWL 0 B1 2 pieces, no adherent fat; minimal atherosis 6.2 Blood Vessel Artery - Tibial 0007610 1080 844 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.981079 94050 0.976303 0.983005 0.859262 20881 1 76 0.00211401 166 0 6.94285e+07 0.023256 246463 7.06289e+07 2.64504e+06 20892 3.45501e+07 0 0.117041 0.983005 0.844658 6.94285e+07 0.00294374 1.48065e+07 6.26685e+06 1.49587e+07 168 1.49075e+07 1.47516e+07 0.00252806 1.4988e+07 50.1345 0.00348955 0.98493 0 50.2556 GTEX-1LG7Y-0426-SM-DKPQB 0 B1 2 pieces, ~10% fascia/vascular elements 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1082 842 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.990484 1.04297e+06 0.943805 0.992678 0.759152 23962 1 76 0.00280209 215 0 9.95134e+07 0.0558823 769565 1.00247e+08 1.06293e+07 23998 4.95267e+07 0 0.184653 0.992678 0.753593 9.95134e+07 0.00322398 2.09616e+07 4.3467e+07 2.1312e+07 241 2.13505e+07 1.61072e+07 0.00301257 2.11422e+07 49.7549 0.00767666 0.994872 0 50.4145 GTEX-1LG7Y-0526-SM-DKPQC 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40-45 microns 7 Skin Skin - Sun Exposed (Lower leg) 0004264 1080 844 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991117 301147 0.9714 0.993262 0.744967 25567 1 76 0.00267548 284 0 1.03111e+08 0.0283758 452974 1.03811e+08 9.1015e+06 25619 5.13357e+07 0 0.226433 0.993262 0.739948 1.03111e+08 0.00314634 2.26838e+07 1.16226e+07 2.28114e+07 272 2.28449e+07 1.62575e+07 0.0029104 2.28575e+07 50.0138 0.00436347 0.995408 0 50.1402 GTEX-1LG7Y-0626-SM-DHXJM 1 B1 2 pieces, feature of goitre; trace nubbins of fat/fibrous tissue up to ~1mm, delineated 7.2 Thyroid Thyroid 0002046 1085 839 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991999 312518 0.971199 0.992947 0.828215 24273 1 76 0.00221411 280 0 9.54065e+07 0.0284259 251283 9.60842e+07 5.51929e+06 24303 4.75521e+07 0 0.142985 0.992947 0.822373 9.54065e+07 0.00243833 2.08279e+07 1.02048e+07 2.11319e+07 267 2.1131e+07 1.94814e+07 0.00232611 2.09199e+07 49.749 0.00261524 0.993894 0 50.3623 GTEX-1LG7Y-0826-SM-E9TJX 1 B1 2 pieces, moderate congestion 6.4 Lung Lung 0008952 1086 838 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.975732 370727 0.974691 0.977406 0.776555 24473 1 76 0.00227798 207 0 9.55314e+07 0.024942 565508 9.77397e+07 4.54478e+06 24503 4.74901e+07 0 0.198136 0.977406 0.75901 9.55314e+07 0.00297542 2.09943e+07 9.5622e+06 2.12515e+07 234 2.11842e+07 1.55864e+07 0.0026261 2.12178e+07 50.0397 0.00578586 0.979081 0 50.3044 GTEX-1LG7Y-1126-SM-CYPTE 1 B1 2 pieces, trace vascular elements, rep. delineated 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1090 834 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993367 182753 0.976629 0.994176 0.812096 21674 1 76 0.00223757 131 0 5.98811e+07 0.023055 295569 6.02319e+07 4.3446e+06 21693 2.98416e+07 0 0.164532 0.994176 0.807367 5.98811e+07 0.00287443 1.31037e+07 6.82939e+06 1.31968e+07 148 1.31603e+07 1.05198e+07 0.00255574 1.31944e+07 50.0646 0.00490718 0.994986 0 50.177 GTEX-1LG7Y-1226-SM-CXZKD 1 B1 2 pieces, moderate interstitial fibrosis/ chronic ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 1093 831 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993365 104106 0.986465 0.995239 0.870898 19259 1 76 0.00177983 190 0 5.99473e+07 0.0134724 3.83584e+06 6.02341e+07 3.92851e+06 19262 2.98701e+07 0 0.115567 0.995239 0.866752 5.99473e+07 0.00299808 1.31623e+07 1.15969e+07 1.3947e+07 225 1.37393e+07 3.43109e+06 0.00238781 1.34664e+07 49.4984 0.0636823 0.997113 0 51.4473 GTEX-1LG7Y-1326-SM-D4P45 1 B1 6 pieces, minimal atherosis 6.2 Blood Vessel Artery - Aorta 0001496 1094 830 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.990837 188573 0.970548 0.99228 0.717274 23998 1 76 0.00277956 158 0 8.42063e+07 0.029069 281582 8.48614e+07 1.01083e+07 24042 4.18842e+07 0 0.253274 0.99228 0.711736 8.42063e+07 0.00397641 1.82943e+07 8.60263e+06 1.84034e+07 174 1.83783e+07 1.28032e+07 0.00337711 1.84406e+07 50.0846 0.00331814 0.993723 0 50.1486 GTEX-1LG7Y-1426-SM-D4P31 1 B1 2 pieces, no abnormalities 6.8 Heart Heart - Atrial Appendage 0006631 1095 829 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994066 152432 0.975684 0.99518 0.790446 23176 1 76 0.00243994 266 0 8.80361e+07 0.024113 3.0231e+06 8.84625e+07 1.04212e+07 23203 4.38778e+07 0 0.185239 0.99518 0.786636 8.80361e+07 0.00340749 1.91838e+07 1.13158e+07 1.97084e+07 268 1.9687e+07 1.03268e+07 0.00292318 1.92978e+07 49.5009 0.0341738 0.996294 0 50.6744 GTEX-1LG7Y-1626-SM-D4P24 1 B1 6 pieces, confirmed target muscularis 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 1110 814 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992385 158366 0.970195 0.993953 0.805649 22850 1 76 0.00256787 198 0 7.74641e+07 0.0296562 2.28197e+06 7.79354e+07 1.02338e+07 22872 3.85839e+07 0 0.164547 0.993953 0.800777 7.74641e+07 0.00387737 1.68079e+07 8.04586e+06 1.73043e+07 230 1.72435e+07 7.86782e+06 0.00322159 1.69807e+07 49.6161 0.0292803 0.995521 0 50.7276 GTEX-1LG7Y-1726-SM-EV7AR 1 B1 6 pieces, squamous mucosa with early separation, up to ~0.4mm, 20-30% of thickness 7.2 Esophagus Esophagus - Mucosa 0006920 1111 813 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.987148 289619 0.971614 0.988204 0.77723 22990 1 76 0.0025081 272 0 9.32795e+07 0.0281742 1.11358e+06 9.4393e+07 1.00151e+07 23022 4.64753e+07 0 0.194384 0.988204 0.768062 9.32795e+07 0.00403319 2.08277e+07 1.28433e+07 2.09944e+07 261 2.09294e+07 1.39774e+07 0.00326983 2.09943e+07 50.0773 0.0117973 0.989259 0 50.1992 GTEX-1LG7Y-2126-SM-DIPER 2 B1 6 pieces, target mucosa up to 0.4mm, ~10% of thickness, moderately advanced autolysis 5.7 Colon Colon - Transverse 0001157 1121 803 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992758 269153 0.968824 0.99391 0.807473 23720 1 76 0.00213495 274 0 9.63634e+07 0.0309432 1.58412e+06 9.69539e+07 6.79839e+06 23748 4.80154e+07 0 0.161351 0.99391 0.802556 9.63634e+07 0.0034595 2.08631e+07 1.27272e+07 2.10455e+07 303 2.10035e+07 1.51362e+07 0.00279646 2.10193e+07 50.0188 0.0163389 0.995062 0 50.2176 GTEX-1LG7Y-2226-SM-E9U5K 1 B1 6 pieces, confirmed target muscularis. 6.2 Colon Colon - Sigmoid 0001159 1124 800 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985868 207871 0.971088 0.986687 0.812214 22743 1 76 0.00178735 163 0 7.65612e+07 0.0286826 804912 7.75942e+07 3.10838e+06 22767 3.81596e+07 0 0.158874 0.986687 0.801401 7.65612e+07 0.00268215 1.64357e+07 6.32082e+06 1.65977e+07 197 1.65225e+07 1.24928e+07 0.00223438 1.65745e+07 50.0787 0.0103734 0.987506 0 50.2452 GTEX-1LG7Y-2326-SM-EVR56 2 B1 2 pieces, spermatogenesis appears reduced 6.1 Testis Testis 0000473 1125 799 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986314 346432 0.931749 0.988365 0.741505 33857 1 76 0.00221599 285 0 1.0427e+08 0.0679559 1.6315e+06 1.05498e+08 8.08862e+06 33936 5.18967e+07 0 0.190243 0.988365 0.732878 1.0427e+08 0.00366801 2.17263e+07 1.37508e+07 2.19282e+07 278 2.19335e+07 1.62072e+07 0.00294049 2.19082e+07 49.9711 0.0154648 0.990417 0 50.2312 GTEX-1LG7Y-2426-SM-EVR57 2 B1 2 pieces, glandular elements with advanced autolysis, hyperplastic pattern 5.7 Prostate Prostate 0002367 1125 799 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.976837 189510 0.96678 0.978984 0.804506 23617 1 76 0.00224583 154 0 6.60451e+07 0.0329391 1.5811e+06 6.74629e+07 5.23084e+06 23639 3.28337e+07 0 0.162274 0.978984 0.787599 6.60451e+07 0.00400668 1.45348e+07 7.58544e+06 1.48443e+07 178 1.47653e+07 7.95622e+06 0.00312433 1.47512e+07 49.9761 0.0234366 0.981132 0 50.5267 GTEX-1LG7Y-2526-SM-EWRO7 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~35microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1126 798 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986175 222734 0.974735 0.988767 0.753459 24465 1 76 0.00234529 219 0 9.14668e+07 0.0250534 773552 9.25059e+07 5.75064e+06 24514 4.55084e+07 0 0.221276 0.988767 0.744996 9.14668e+07 0.00315599 2.01042e+07 1.03821e+07 2.03207e+07 250 2.03094e+07 1.33716e+07 0.0027401 2.03327e+07 50.0288 0.00836219 0.99136 0 50.2678 GTEX-1LG7Y-2726-SM-D5OVW 2 B1 6 pieces, glomeruli present; tubules with advance autolysis/sloughing 6.1 Kidney Kidney - Cortex 0001225 1130 794 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-10263,LCSET-9949 11/30/2016 TruSeq.v1 RNASEQ 0.993263 266383 0.973079 0.993569 0.837421 24469 1 76 0.00403535 269 0 1.16542e+08 0.0267146 6.64618e+06 1.17297e+08 1.63316e+07 24505 5.80657e+07 0 0.135658 0.993569 0.832035 1.16542e+08 0.00380351 2.48809e+07 2.07151e+07 2.7159e+07 320 2.69814e+07 1.13728e+07 0.00391947 2.50777e+07 48.1716 0.0566613 0.993874 0 52.1887 GTEX-1LG7Y-2926-SM-CXZKE 1 B1 1 piece, ~20% neurohypophysis (delineated, ~5mm focus); rest is adenohypophysis 8 Pituitary Pituitary 0000007 1174 750 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.991914 285513 0.96248 0.993472 0.746527 24035 1 76 0.00197257 128 0 6.86571e+07 0.0372837 176115 6.91083e+07 4.20024e+06 24066 3.41991e+07 0 0.215953 0.993472 0.741654 6.86571e+07 0.0028964 1.49231e+07 1.03619e+07 1.51272e+07 144 1.5172e+07 1.13996e+07 0.00243376 1.49833e+07 49.6872 0.00254839 0.99503 0 50.3397 GTEX-1LG7Y-3026-SM-D5OVI 1 B1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1176 748 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9949 11/01/2016 TruSeq.v1 RNASEQ 0.990688 339535 0.965326 0.992573 0.838562 23692 1 76 0.0038722 268 0 8.51274e+07 0.0342793 3.00201e+06 8.57643e+07 1.18621e+07 23707 4.23826e+07 0 0.126764 0.992573 0.832334 8.51274e+07 0.00463882 1.86758e+07 1.31617e+07 1.8889e+07 265 1.89084e+07 1.07823e+07 0.00425478 1.88074e+07 49.8661 0.035003 0.994458 0 50.2838 GTEX-1LG7Y-3126-SM-EV7AS 1 B1 3 pieces, no abnormalities 7.1 Brain Brain - Cerebellum 0002037 1178 746 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989976 541082 0.942113 0.990941 0.698583 25381 1 76 0.00261305 271 0 1.16896e+08 0.0575193 1.60937e+06 1.17965e+08 1.21761e+07 25436 5.82201e+07 0 0.243531 0.990941 0.692254 1.16896e+08 0.00378426 2.51131e+07 2.09123e+07 2.53168e+07 303 2.5311e+07 1.40315e+07 0.00319808 2.52249e+07 49.9149 0.0136428 0.991906 0 50.202 GTEX-1LG7Z-0002-SM-DE1KD B1 Blood Whole Blood 0013756 -166 BP-62480 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LG7Z-0002-SM-DJWY1 B1 Blood Whole Blood 0013756 -166 BP-62480 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LG7Z-0005-SM-DKPQ6 B1 9.9 Blood Whole Blood 0013756 -166 BP-62494 RNA isolation_PAXgene Blood RNA (Manual) 04/13/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.97799 1.1281e+06 0.962628 0.980202 0.810214 19266 1 76 0.00290284 270 0 1.23524e+08 0.0364077 311572 1.26019e+08 1.28175e+07 19277 6.14452e+07 0 0.152413 0.980202 0.794173 1.23524e+08 0.00342707 2.79194e+07 1.46762e+08 2.82215e+07 264 2.83484e+07 3.127e+07 0.00316436 2.80806e+07 49.7627 0.00247243 0.982414 0 50.269 GTEX-1LG7Z-0126-SM-EV79V 1 B1 2 partially fragmented pieces; up to 0.28mm artefactual outer rim possibly due to drying or incorrect fixation; 5.5 Spleen Spleen 0002106 159 800 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983054 278832 0.963604 0.984163 0.777147 25027 1 76 0.0029352 271 0 9.80726e+07 0.0351425 976461 9.96508e+07 1.08529e+07 25065 4.87964e+07 0 0.186457 0.984163 0.764839 9.80726e+07 0.00426268 2.15332e+07 1.32831e+07 2.17654e+07 312 2.16757e+07 1.33262e+07 0.00359819 2.17237e+07 50.0553 0.00979883 0.985272 0 50.2681 GTEX-1LG7Z-0226-SM-E6CIG 1 B1 2 pieces, 1 fragmented 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 177 782 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993877 394425 0.975758 0.995044 0.83128 23580 1 76 0.00176708 280 0 1.04015e+08 0.0239014 613427 1.04533e+08 6.29038e+06 23606 5.18159e+07 0 0.144477 0.995044 0.827161 1.04015e+08 0.00233394 2.28486e+07 9.79346e+06 2.29742e+07 306 2.29075e+07 1.76641e+07 0.00205017 2.30184e+07 50.1208 0.00586829 0.996212 0 50.1371 GTEX-1LG7Z-0326-SM-DHXK3 1 B1 2 pieces plus a separate piece of fat; larger piece has up to 3mm external fat 7.1 Pancreas Pancreas 0001150 179 780 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993968 387422 0.982693 0.994655 0.866517 22553 1 76 0.00216085 201 0 1.16897e+08 0.0167599 244929 1.17525e+08 5.89049e+06 22576 5.82559e+07 0 0.116175 0.994655 0.861886 1.16897e+08 0.00246148 2.70509e+07 3.37772e+07 2.73885e+07 249 2.73473e+07 3.4712e+07 0.00231106 2.71687e+07 49.8362 0.00208406 0.995343 0 50.3101 GTEX-1LG7Z-0426-SM-D4P47 1 B1 2 pieces; cortex with up to 3mm external adherent fat 5.8 Adrenal Gland Adrenal Gland 0002369 183 776 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994016 332448 0.976912 0.995292 0.805611 24204 1 76 0.00228171 375 0 1.3348e+08 0.0228045 2.82899e+06 1.34111e+08 1.6405e+07 24255 6.65409e+07 0 0.171301 0.995292 0.801819 1.3348e+08 0.00339846 2.93225e+07 2.17039e+07 2.97689e+07 337 2.96425e+07 1.83321e+07 0.00283937 2.95933e+07 49.9585 0.0210944 0.996568 0 50.3777 GTEX-1LG7Z-0526-SM-D4P3Q 1 B1 2 pieces; 1 with up to 2.3mm adherent skeletal muscle [labeled] 7.1 Thyroid Thyroid 0002046 186 773 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.994546 215027 0.972056 0.995688 0.81149 24618 1 76 0.00218164 378 0 1.08393e+08 0.0276627 542806 1.08862e+08 1.11929e+07 24653 5.40397e+07 0 0.160566 0.995688 0.807992 1.08393e+08 0.00353133 2.36732e+07 1.08223e+07 2.39895e+07 334 2.39107e+07 1.76449e+07 0.00285571 2.38636e+07 49.9507 0.00498616 0.996831 0 50.3319 GTEX-1LG7Z-0626-SM-D3LA2 1 B1 6 pieces; fibrous intimal plaques of variable thickness 7.8 Blood Vessel Artery - Aorta 0001496 188 771 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991616 369304 0.979177 0.993855 0.849975 22330 1 76 0.00249846 200 0 8.82906e+07 0.0203999 324654 8.88365e+07 9.10894e+06 22349 4.39441e+07 0 0.129202 0.993855 0.844752 8.82906e+07 0.00377579 1.91262e+07 6.19659e+06 1.92898e+07 212 1.93008e+07 1.80018e+07 0.00313569 1.93019e+07 50.0015 0.00365451 0.996094 0 50.2129 GTEX-1LG7Z-0726-SM-CXKYD 1 B1 2 pieces; fibrofatty tissue without mammary ducts 7.4 Breast Breast - Mammary Tissue 0008367 190 769 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.987516 277719 0.973767 0.99009 0.806048 23602 1 76 0.00720558 154 0 8.60118e+07 0.026004 379764 8.68727e+07 1.46196e+07 23632 4.27453e+07 0 0.167718 0.99009 0.79806 8.60118e+07 0.0115512 1.87735e+07 8.79811e+06 1.90036e+07 174 1.89724e+07 1.39087e+07 0.00937274 1.90158e+07 50.0571 0.0043715 0.992663 0 50.3045 GTEX-1LG7Z-0826-SM-CXKYN 1 B1 2 pieces; 1 piece contains stroma and muscle without prostatic tissue [labeled] 6.2 Prostate Prostate 0002367 196 763 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.985067 321169 0.96815 0.988201 0.776767 25239 1 76 0.00726523 165 0 8.84274e+07 0.0316225 760902 8.94833e+07 1.51028e+07 25269 4.39086e+07 0 0.191383 0.988201 0.767601 8.84274e+07 0.0122865 1.9342e+07 1.0777e+07 1.9712e+07 186 1.96937e+07 1.08126e+07 0.0097679 1.96166e+07 49.9019 0.00850329 0.991334 0 50.4737 GTEX-1LG7Z-0926-SM-CXKYK 1 B1 6 pieces; 5 with submucosal mucous glands; 1 with periductal chronic inflammatory cells [labeled] 9.4 Esophagus Esophagus - Mucosa 0006920 204 755 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.983571 400912 0.978705 0.986565 0.848066 22693 1 76 0.00726259 177 0 9.88522e+07 0.0208473 532182 1.00198e+08 1.79154e+07 22708 4.91086e+07 0 0.13064 0.986565 0.836672 9.88522e+07 0.011871 2.22072e+07 1.64619e+07 2.24303e+07 192 2.24879e+07 1.98036e+07 0.00955981 2.24341e+07 49.9402 0.00531129 0.989559 0 50.2499 GTEX-1LG7Z-1026-SM-D3LA3 1 B1 6 pieces; well dissected muscularis 8.5 Esophagus Esophagus - Muscularis 0004648 206 753 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.9922 437457 0.978273 0.994416 0.855831 23103 1 76 0.00233011 387 0 1.13021e+08 0.0213676 586440 1.13655e+08 1.14768e+07 23122 5.6268e+07 0 0.122443 0.994416 0.851052 1.13021e+08 0.00358618 2.42142e+07 8.67415e+06 2.45748e+07 344 2.457e+07 2.14445e+07 0.00295675 2.44422e+07 49.8695 0.00515981 0.996632 0 50.3696 GTEX-1LG7Z-1126-SM-DIPF2 1 B1 6 pieces; variable amounts of fibrofatty external stroma 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 208 751 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99378 562331 0.973033 0.994966 0.82971 23298 1 76 0.00207874 281 0 1.03694e+08 0.0265939 462483 1.04219e+08 8.14632e+06 23325 5.16743e+07 0 0.143323 0.994966 0.825533 1.03694e+08 0.00295551 2.24014e+07 1.12761e+07 2.2634e+07 323 2.26101e+07 1.95884e+07 0.0025166 2.25425e+07 49.9252 0.00443762 0.996151 0 50.2583 GTEX-1LG7Z-1226-SM-DHXK4 1 B1 6 pieces; well preserved mucosa and submucosa, no muscularis 7 Stomach Stomach 0000945 210 749 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.990029 339696 0.981781 0.990979 0.838823 22903 1 76 0.00196953 432 0 1.16803e+08 0.0179651 1.29495e+06 1.17866e+08 6.48096e+06 22931 5.82094e+07 0 0.142958 0.990979 0.831256 1.16803e+08 0.00218609 2.66574e+07 8.41962e+07 2.71871e+07 368 2.71434e+07 2.62552e+07 0.0020777 2.6797e+07 49.6789 0.0109867 0.991929 0 50.4919 GTEX-1LG7Z-1326-SM-DIPF3 1 B1 6 pieces; 2 contain mucosa as well as muscularis 8.3 Colon Colon - Sigmoid 0001159 214 745 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993511 488991 0.977781 0.994785 0.848818 23064 1 76 0.00198903 386 0 1.14853e+08 0.0218797 654195 1.15455e+08 8.91471e+06 23088 5.72436e+07 0 0.128963 0.994785 0.844391 1.14853e+08 0.00312401 2.48562e+07 1.04686e+07 2.50732e+07 337 2.50814e+07 2.18004e+07 0.00255579 2.49809e+07 49.8997 0.00566621 0.996059 0 50.2173 GTEX-1LG7Z-1426-SM-CXKYV 1 B1 6 pieces; all contain mucosa and muscle 7.9 Colon Colon - Transverse 0001157 216 743 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.98531 402322 0.972672 0.988212 0.795846 24992 1 76 0.00735273 383 0 1.22985e+08 0.025938 2.20282e+06 1.24452e+08 1.99711e+07 25038 6.10365e+07 0 0.176826 0.988212 0.786465 1.22985e+08 0.0120556 2.72058e+07 1.92264e+07 2.75177e+07 343 2.75468e+07 1.64508e+07 0.00969728 2.74692e+07 49.9295 0.0177002 0.991113 0 50.285 GTEX-1LG7Z-1626-SM-CXKYR 1 B1 6 pieces; hair-bearing skin sampled; up to 20% dermal fat 5.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 227 732 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.984225 207288 0.969327 0.987834 0.772821 24338 1 76 0.00692596 151 0 7.47441e+07 0.0305006 707756 7.56646e+07 1.21442e+07 24362 3.71048e+07 0 0.196506 0.987834 0.763419 7.47441e+07 0.012672 1.63995e+07 9.07402e+06 1.65995e+07 156 1.65851e+07 9.81853e+06 0.0097885 1.66692e+07 50.1265 0.00935386 0.991443 0 50.303 GTEX-1LG7Z-1726-SM-D3LA4 1 B1 5 pieces; poorly trimmed: up to 2mm subcutaneous fat present 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 231 728 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990743 332706 0.968813 0.993108 0.794294 22358 1 76 0.00245745 218 0 7.61626e+07 0.0309186 284722 7.66912e+07 7.56516e+06 22391 3.79093e+07 0 0.174519 0.993108 0.78882 7.61626e+07 0.00383271 1.63491e+07 1.08193e+07 1.64762e+07 177 1.65018e+07 1.30804e+07 0.00314344 1.64925e+07 49.9859 0.00371258 0.995473 0 50.1938 GTEX-1LG7Z-1826-SM-D4P3R 1 B1 2 pieces 6.6 Nerve Nerve - Tibial 0001323 238 721 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993638 216756 0.969416 0.994906 0.76314 24956 1 76 0.00253864 282 0 1.06782e+08 0.0303072 388716 1.07328e+08 1.39219e+07 25004 5.32156e+07 0 0.206276 0.994906 0.759252 1.06782e+08 0.00334293 2.34044e+07 9.46065e+06 2.36788e+07 310 2.3646e+07 1.64379e+07 0.00294027 2.35619e+07 49.9109 0.00362175 0.996173 0 50.2915 GTEX-1LG7Z-1926-SM-DLHBO 1 B1 2 pieces; minimal plaque; well trimmed 7.2 Blood Vessel Artery - Tibial 0007610 239 720 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.990256 653016 0.973038 0.993059 0.843447 21012 1 76 0.00240587 280 0 9.73297e+07 0.0265348 352507 9.80099e+07 8.433e+06 21031 4.8389e+07 0 0.129591 0.993059 0.837592 9.73297e+07 0.00272229 2.06481e+07 1.00025e+07 2.09305e+07 263 2.09607e+07 1.94053e+07 0.00256363 2.08656e+07 49.8862 0.00359665 0.995863 0 50.3397 GTEX-1LG7Z-2026-SM-DLHBP 1 B1 2 pieces; 1 contains 25% fibrous tissue; 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 241 718 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.990628 516088 0.975464 0.993218 0.818053 22311 1 76 0.0025789 176 0 7.93736e+07 0.0242317 419221 7.99157e+07 7.23896e+06 22339 3.94585e+07 0 0.15741 0.993218 0.812505 7.93736e+07 0.00289693 1.74157e+07 8.02313e+06 1.76254e+07 189 1.76548e+07 1.44234e+07 0.0027375 1.75764e+07 49.8886 0.00524579 0.995807 0 50.2992 GTEX-1LG7Z-2126-SM-CXKYU 1 B1 2 pieces; 1 with 30% fat and vascular content 8.1 Muscle Muscle - Skeletal 0011907 243 716 BP-75925 RNA Extraction from Paxgene-derived Lysate Plate Based 06/22/2016 LCSET-9766 09/13/2016 TruSeq.v1 RNASEQ 0.987524 404540 0.982432 0.990121 0.87491 21895 1 76 0.00699024 211 0 1.07824e+08 0.0173046 983243 1.089e+08 1.83645e+07 21911 5.36075e+07 0 0.107522 0.990121 0.866267 1.07824e+08 0.0112273 2.34265e+07 1.1625e+07 2.38193e+07 252 2.38108e+07 2.08336e+07 0.00910324 2.36774e+07 49.8596 0.0090289 0.992718 0 50.4157 GTEX-1LGOU-0003-SM-DE1KS B1 Blood Whole Blood 0013756 -163 BP-62491,BP-62492 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LGOU-0003-SM-DJWYI B1 Blood Whole Blood 0013756 -163 BP-62491,BP-62492 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/13/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LGOU-0005-SM-DKPPW B1 8.1 Blood Whole Blood 0013756 -163 BP-62651 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.985477 1.08607e+06 0.950507 0.987482 0.789537 18924 1 76 0.00278856 201 0 1.07406e+08 0.0490878 377819 1.08768e+08 1.13517e+07 18938 5.348e+07 0 0.16097 0.987482 0.779653 1.07406e+08 0.0028724 2.36542e+07 1.02913e+08 2.39735e+07 247 2.40525e+07 2.33326e+07 0.0028304 2.37968e+07 49.7329 0.00347362 0.989486 0 50.3352 GTEX-1LGOU-0126-SM-EV79W 1 B1 2 pieces, moderate lymphocytic/Hashimoto thyroiditis, rep lymphoid aggregates encircled 7.5 Thyroid Thyroid 0002046 82 650 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989204 362265 0.963182 0.990385 0.734152 26752 1 76 0.0025117 277 0 1.17768e+08 0.0361958 282691 1.18911e+08 1.29821e+07 26818 5.86528e+07 0 0.22903 0.990385 0.727094 1.17768e+08 0.00369842 2.57379e+07 1.22951e+07 2.59459e+07 316 2.59121e+07 1.84252e+07 0.00310435 2.58993e+07 49.9877 0.00237732 0.991567 0 50.2012 GTEX-1LGOU-0326-SM-D3LAM 0 B1 2 pieces, no abnormalities 9 Heart Heart - Atrial Appendage 0006631 104 628 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992871 429180 0.98087 0.994875 0.852642 22714 1 76 0.00257074 270 0 1.26207e+08 0.0188344 2.18991e+06 1.26858e+08 1.31139e+07 22735 6.28615e+07 0 0.128229 0.994875 0.848272 1.26207e+08 0.00363732 2.7371e+07 1.90916e+07 2.77748e+07 330 2.773e+07 2.07728e+07 0.00310296 2.76302e+07 49.9099 0.0172628 0.996879 0 50.3661 GTEX-1LGOU-0426-SM-D3L8O 0 B1 2 pieces, no atherosis; rims of adherent fibrous tissue up to ~0.5mm 8.4 Blood Vessel Artery - Coronary 0001621 143 589 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992723 321481 0.974916 0.994635 0.832461 22486 1 76 0.00244056 211 0 9.3062e+07 0.0247514 330030 9.3564e+07 8.05535e+06 22505 4.63476e+07 0 0.142455 0.994635 0.827995 9.3062e+07 0.00329058 2.00603e+07 6.85446e+06 2.0356e+07 235 2.03097e+07 1.84248e+07 0.00286475 2.02715e+07 49.9529 0.00352732 0.996547 0 50.3658 GTEX-1LGOU-0526-SM-D3LAO 1 B1 6 pieces, squamous mucosa is ~0.35mm, ~30-40% of thickness. Incidental submucosal mucus gland encircled 9.5 Esophagus Esophagus - Mucosa 0006920 148 584 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991955 456542 0.977893 0.993981 0.844845 24199 1 76 0.00247549 387 0 1.26645e+08 0.0218078 652618 1.27412e+08 1.32588e+07 24226 6.30731e+07 0 0.133048 0.993981 0.839759 1.26645e+08 0.00353365 2.80728e+07 1.42956e+07 2.83518e+07 334 2.8363e+07 2.56028e+07 0.0030035 2.82951e+07 49.9401 0.00512213 0.996006 0 50.2473 GTEX-1LGOU-0626-SM-D3L8F 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 150 582 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992354 545352 0.977758 0.994389 0.844904 22686 1 76 0.00243686 381 0 1.10544e+08 0.0219032 902565 1.11168e+08 1.07495e+07 22716 5.50325e+07 0 0.132854 0.994389 0.840163 1.10544e+08 0.00365579 2.38993e+07 8.54268e+06 2.41308e+07 345 2.41584e+07 2.03859e+07 0.00304508 2.40771e+07 49.9157 0.00811892 0.996423 0 50.241 GTEX-1LGOU-0726-SM-E9TIY 1 B1 6 pieces, no abnormalities 8.9 Heart Heart - Left Ventricle 0006566 154 578 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.990103 700278 0.986913 0.992007 0.870028 21086 1 76 0.00204557 374 0 1.2643e+08 0.012838 2.5083e+06 1.27449e+08 4.79043e+06 21102 6.29337e+07 0 0.116885 0.992007 0.863074 1.2643e+08 0.00264519 2.78341e+07 2.34817e+07 2.80222e+07 360 2.79897e+07 2.34876e+07 0.00234481 2.80664e+07 50.0684 0.0196809 0.993911 0 50.1684 GTEX-1LGOU-0826-SM-DHXKL 1 B1 2 pieces, fascia/mesothelial hyerplasia/vascular elements are ~30% of tissue, rep delineated 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 167 565 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993886 371001 0.977575 0.994689 0.847781 23802 1 76 0.0025141 278 0 1.14731e+08 0.0221989 558611 1.15344e+08 8.75945e+06 23832 5.72035e+07 0 0.129793 0.994689 0.843279 1.14731e+08 0.0028287 2.52279e+07 1.2799e+07 2.55545e+07 317 2.5468e+07 2.05017e+07 0.00267127 2.54034e+07 49.9365 0.00484302 0.995492 0 50.3216 GTEX-1LGOU-0926-SM-DIPFT 1 B1 6 pieces, confirmed target muscularis 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 172 560 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993516 379043 0.977945 0.994791 0.844771 22536 1 76 0.00214306 280 0 1.03744e+08 0.0217625 1.07866e+06 1.04287e+08 7.5837e+06 22554 5.17052e+07 0 0.133173 0.994791 0.840371 1.03744e+08 0.00318082 2.24121e+07 9.71676e+06 2.26511e+07 321 2.26373e+07 1.80954e+07 0.00266127 2.25477e+07 49.9008 0.0103432 0.996067 0 50.2653 GTEX-1LGOU-1026-SM-DHXL4 1 B1 2 pieces, one all hilum other (ensquared) with ovarian parenchyma, incidental follicular cyst encircled 7.9 Ovary Ovary 0000992 179 553 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.99358 480399 0.968093 0.994435 0.76515 24462 1 76 0.00224771 279 0 1.03398e+08 0.0315977 237567 1.03977e+08 5.79335e+06 24512 5.1526e+07 0 0.202943 0.994435 0.760892 1.03398e+08 0.00264379 2.27326e+07 1.04963e+07 2.29606e+07 274 2.29539e+07 1.93406e+07 0.00244558 2.28215e+07 49.8555 0.00228481 0.99529 0 50.2495 GTEX-1LGOU-1126-SM-D3LAI 0 B1 6 pieces, squamous mucosa up to ~0.16mm visible on 4 sections 9 Vagina Vagina 0000996 182 550 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992005 492389 0.968744 0.993938 0.802231 24326 1 76 0.00248486 287 0 1.06466e+08 0.031007 375260 1.07115e+08 1.05159e+07 24355 5.30252e+07 0 0.166514 0.993938 0.797368 1.06466e+08 0.00369091 2.35115e+07 1.5825e+07 2.37823e+07 305 2.37974e+07 1.96899e+07 0.00308671 2.36929e+07 49.89 0.00350333 0.995871 0 50.2863 GTEX-1LGOU-1226-SM-D3L8L 1 B1 2 pieces, myometrium, no abnormalities 8.7 Uterus Uterus 0000995 183 549 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.99277 371771 0.97156 0.994503 0.791518 24275 1 76 0.00239128 286 0 1.1296e+08 0.028063 270737 1.13584e+08 1.07733e+07 24311 5.62618e+07 0 0.180042 0.994503 0.787167 1.1296e+08 0.00338905 2.47053e+07 8.85631e+06 2.49044e+07 319 2.49137e+07 2.03182e+07 0.00288929 2.4879e+07 49.9651 0.00238358 0.996236 0 50.2007 GTEX-1LGOU-1326-SM-D3L8M 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~30 microns 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 188 544 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991991 272131 0.971584 0.993961 0.806557 24295 1 76 0.00256763 218 0 9.05385e+07 0.0282068 1.21056e+06 9.10886e+07 9.03796e+06 24328 4.50887e+07 0 0.165026 0.993961 0.801686 9.05385e+07 0.00381962 1.99002e+07 8.90647e+06 2.01669e+07 242 2.01049e+07 1.45213e+07 0.00319238 2.01239e+07 50.0237 0.0132899 0.99593 0 50.3328 GTEX-1LGOU-1426-SM-D3L8N 1 B1 6 pieces, prominent lymphoid aggregates are ~20-25% of tissue, rep delineated 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 190 542 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990254 409729 0.963159 0.992627 0.743748 26513 1 76 0.00273901 277 0 1.14399e+08 0.0364401 442482 1.15249e+08 1.16363e+07 26575 5.69268e+07 0 0.219411 0.992627 0.738265 1.14399e+08 0.00360472 2.48883e+07 1.13254e+07 2.51707e+07 311 2.5229e+07 1.74467e+07 0.00317083 2.50815e+07 49.8534 0.00383935 0.995001 0 50.2821 GTEX-1LGOU-1526-SM-D3LAJ 1 B1 6 pieces, well-preserved target mucosa up to ~1mm, ~30% of thickness 8 Stomach Stomach 0000945 194 538 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.985901 283357 0.982014 0.987929 0.844538 23153 1 76 0.00259646 425 0 1.16481e+08 0.01761 1.01832e+06 1.17905e+08 1.27789e+07 23175 5.79943e+07 0 0.137476 0.987929 0.834343 1.16481e+08 0.00360176 2.67392e+07 1.14183e+08 2.71126e+07 334 2.71166e+07 2.96894e+07 0.00309808 2.69518e+07 49.8476 0.00863679 0.989957 0 50.3466 GTEX-1LGOU-1626-SM-D3LAK 1 B1 6 pieces, target mucosa up to ~0.3mm, ~10% of thickness 8 Colon Colon - Transverse 0001157 196 536 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.992057 335724 0.975458 0.994031 0.821591 24338 1 76 0.00260877 277 0 9.83929e+07 0.0242655 706448 9.89838e+07 1.01006e+07 24367 4.9e+07 0 0.153867 0.994031 0.816686 9.83929e+07 0.00360528 2.15334e+07 8.75878e+06 2.18916e+07 303 2.18541e+07 1.62625e+07 0.00310603 2.17475e+07 49.8778 0.00713701 0.996004 0 50.4125 GTEX-1LGOU-1726-SM-D3L8P 1 B1 6 pieces, confirmed target muscularis 8.8 Colon Colon - Sigmoid 0001159 204 528 BP-77611 RNA Extraction from Paxgene-derived Lysate Plate Based 08/17/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991637 334642 0.975384 0.993819 0.828206 22436 1 76 0.00248321 215 0 8.38974e+07 0.0242984 595607 8.44192e+07 8.46277e+06 22459 4.17694e+07 0 0.147178 0.993819 0.823086 8.38974e+07 0.00345277 1.80175e+07 6.6132e+06 1.82231e+07 213 1.82543e+07 1.55096e+07 0.00296692 1.81535e+07 49.8616 0.00705535 0.996 0 50.2837 GTEX-1LGOU-1826-SM-D3LAL 0 B1 2 pieces, no adherent fat 7.5 Nerve Nerve - Tibial 0001323 222 510 BP-77664 RNA Extraction from Paxgene-derived Lysate Plate Based 08/18/2016 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990696 394697 0.965246 0.993014 0.738184 25109 1 76 0.00257934 289 0 1.07672e+08 0.0344648 316996 1.08429e+08 1.04792e+07 25168 5.35863e+07 0 0.227062 0.993014 0.733027 1.07672e+08 0.00368185 2.35752e+07 9.50371e+06 2.37837e+07 289 2.3814e+07 1.71044e+07 0.00312931 2.37801e+07 49.9644 0.00292353 0.995333 0 50.2202 GTEX-1LGOU-1926-SM-DKPQP 0 B1 2 pieces, no atherosis or adherent fat 7.4 Blood Vessel Artery - Tibial 0007610 223 509 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992535 361357 0.975415 0.994457 0.851993 20513 1 76 0.00271892 210 0 8.95293e+07 0.0242236 522570 9.00284e+07 9.52389e+06 20531 4.45822e+07 0 0.123422 0.994457 0.84727 8.95293e+07 0.00280106 1.92365e+07 9.38843e+06 1.94488e+07 227 1.94175e+07 1.75658e+07 0.00275991 1.94334e+07 50.0205 0.0058045 0.996379 0 50.2744 GTEX-1LGOU-2026-SM-DIPFF 0 B1 6 pieces, moderate dermal fat, rep delineated; squamous epithelium is ~40 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 225 507 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993141 514305 0.971611 0.994374 0.805004 24280 1 76 0.00217824 311 0 1.06525e+08 0.0281589 1.09288e+06 1.07128e+08 7.99453e+06 24311 5.30929e+07 0 0.166607 0.994374 0.800475 1.06525e+08 0.00328371 2.32158e+07 1.40524e+07 2.33423e+07 318 2.33536e+07 1.9542e+07 0.00273029 2.33313e+07 49.9761 0.0102017 0.995607 0 50.1359 GTEX-1LGOU-2126-SM-DIPFG 0 B1 2 pieces, interstitial fat/vascular elements ~10% of tissue, rep delineated 8.2 Muscle Muscle - Skeletal 0011907 231 501 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993875 472782 0.986197 0.995032 0.883309 19210 1 76 0.00220655 275 0 9.37083e+07 0.0136249 1.19623e+06 9.41762e+07 7.01882e+06 19219 4.6707e+07 0 0.102887 0.995032 0.878921 9.37083e+07 0.00313951 2.06758e+07 1.44912e+07 2.10287e+07 282 2.09858e+07 1.83526e+07 0.00267248 2.08083e+07 49.7876 0.012702 0.99619 0 50.4232 GTEX-1LGOU-2226-SM-E9U56 0 B1 2 pieces, fascia/vascular elements ~5-10% of tissue, rep delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 232 500 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989535 297342 0.976761 0.990458 0.814725 22193 1 76 0.0018059 170 0 7.92461e+07 0.0229583 549895 8.00096e+07 2.98226e+06 22217 3.95077e+07 0 0.162036 0.990458 0.80695 7.92461e+07 0.00268484 1.74911e+07 7.1338e+06 1.76327e+07 200 1.75789e+07 1.36449e+07 0.00224496 1.76154e+07 50.0518 0.00687286 0.99138 0 50.2015 GTEX-1LGOU-5007-SM-AN49H B1 Heart Heart - Left Ventricle 0006566 165 ChIP-Seq GTEX-1LGOU-5013-SM-AN49I B1 Muscle Muscle - Skeletal 0011907 230 ChIP-Seq GTEX-1LGRB-0003-SM-ANILR B1 Blood Whole Blood 0013756 -44 BP-62493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/13/2015 LCSET-8330 12/21/2015 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-1LGRB-0003-SM-AYROG B1 Blood Whole Blood 0013756 -44 BP-62493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/13/2015 LCSET-8653 03/25/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LGRB-0003-SM-DE1N8 B1 Blood Whole Blood 0013756 -44 BP-62493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/13/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LGRB-0006-SM-DKPPB B1 9.1 Blood Whole Blood 0013756 -44 BP-62494 RNA isolation_PAXgene Blood RNA (Manual) 04/13/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.984775 792559 0.971543 0.987018 0.822288 19255 1 76 0.00281333 271 0 1.2432e+08 0.0277724 329492 1.25955e+08 1.2657e+07 19269 6.18575e+07 0 0.149256 0.987018 0.811613 1.2432e+08 0.00326268 2.81954e+07 1.10986e+08 2.84354e+07 287 2.85409e+07 3.11144e+07 0.0030375 2.83675e+07 49.8477 0.00261594 0.989261 0 50.2119 GTEX-1LGRB-0126-SM-CNNR6 1 B1 2 pieces; fragmented 7.6 Spleen Spleen 0002106 102 779 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.989091 290315 0.962161 0.991103 0.754837 25197 1 76 0.00315294 273 0 1.12157e+08 0.0355839 942725 1.13164e+08 1.17899e+07 25248 5.57206e+07 0 0.207324 0.991103 0.748121 1.12157e+08 0.00446335 2.46548e+07 1.81576e+07 2.49292e+07 305 2.49636e+07 1.57158e+07 0.00380681 2.48258e+07 49.8616 0.00833062 0.993115 0 50.2768 GTEX-1LGRB-0226-SM-CNPQK 0 B1 2 pieces; some widened airspaces, small focus of bronchopneumonia 8.2 Lung Lung 0008952 116 765 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984812 303705 0.972169 0.988082 0.814937 24212 1 76 0.00577131 160 0 8.25008e+07 0.0273765 359524 8.3496e+07 2.18045e+07 24243 4.09957e+07 0 0.157232 0.988082 0.805225 8.25008e+07 0.00880843 1.81878e+07 8.61908e+06 1.83064e+07 174 1.83489e+07 1.37443e+07 0.00728484 1.84015e+07 50.0716 0.00430588 0.991352 0 50.1624 GTEX-1LGRB-0326-SM-CNPQC 1 B1 2 pieces; predominantly adrenal cortex with small portion of medulla 9.5 Adrenal Gland Adrenal Gland 0002369 129 752 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985736 426446 0.978534 0.9886 0.839614 24411 1 76 0.00577523 277 0 1.20146e+08 0.0210533 2.05649e+06 1.21531e+08 3.2869e+07 24435 5.97452e+07 0 0.13892 0.9886 0.830042 1.20146e+08 0.00816249 2.64619e+07 2.01255e+07 2.68421e+07 304 2.69226e+07 2.12512e+07 0.0069654 2.66851e+07 49.7785 0.0169215 0.991465 0 50.3567 GTEX-1LGRB-0426-SM-CNNRD 1 B1 2 pieces; 20 and 80% is fat, mild fibrosis and chronic inflammation, foci of atrophy and PanIN-1B 8 Pancreas Pancreas 0001150 145 736 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992299 531438 0.97966 0.994058 0.859566 22979 1 76 0.0023635 270 0 1.28262e+08 0.0200744 507754 1.29029e+08 1.34507e+07 23006 6.38832e+07 0 0.120093 0.994058 0.854459 1.28262e+08 0.00316482 2.95802e+07 3.37157e+07 2.98419e+07 261 2.9802e+07 3.77008e+07 0.00276345 2.98351e+07 50.0277 0.00393519 0.995817 0 50.2202 GTEX-1LGRB-0526-SM-COH3A 0 B1 2 pieces; mature fat 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 157 724 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993239 357947 0.980577 0.99452 0.860667 22068 1 76 0.00333571 212 0 8.7336e+07 0.0190941 541616 8.78172e+07 8.6914e+06 22084 4.35292e+07 0 0.11991 0.99452 0.855951 8.7336e+07 0.00414906 1.91779e+07 8.13187e+06 1.93349e+07 224 1.93203e+07 1.75991e+07 0.00374186 1.92999e+07 49.9737 0.00616754 0.995802 0 50.2039 GTEX-1LGRB-0626-SM-CNNQH 1 B1 2 pieces; severe steatosis with mild chronic inflammation, Mallory's hyaline, consistent with history of alcohol abuse 9.6 Liver Liver 0001114 158 723 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993963 354877 0.983036 0.995492 0.86572 22401 1 76 0.00219994 277 0 1.40389e+08 0.01672 1.13892e+06 1.41025e+08 1.44084e+07 22428 6.99782e+07 0 0.117316 0.995492 0.861818 1.40389e+08 0.00301181 3.05945e+07 2.14746e+07 3.08654e+07 319 3.08406e+07 3.1021e+07 0.00260525 3.08043e+07 49.9706 0.00807601 0.997022 0 50.2204 GTEX-1LGRB-0726-SM-COH3B 1 B1 6 pieces; mild plaque 8.1 Blood Vessel Artery - Aorta 0001496 169 712 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993668 321736 0.978613 0.994655 0.850081 21872 1 76 0.00338558 217 0 9.16385e+07 0.0209486 231219 9.21309e+07 9.59802e+06 21892 4.56786e+07 0 0.128532 0.994655 0.845537 9.16385e+07 0.00373329 1.98843e+07 6.99396e+06 1.99865e+07 240 1.99686e+07 1.87085e+07 0.00355926 1.99943e+07 50.0321 0.00250968 0.995641 0 50.1282 GTEX-1LGRB-0826-SM-COH3J 1 B1 2 pieces; partial rim of adipose tissue (from 10-40%), intimal thickening 8.5 Blood Vessel Artery - Coronary 0001621 185 696 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993123 269528 0.973708 0.994331 0.839327 21933 1 76 0.00344491 171 0 7.6088e+07 0.0258438 213428 7.65218e+07 8.20664e+06 21951 3.79096e+07 0 0.13438 0.994331 0.834569 7.6088e+07 0.00388981 1.65453e+07 5.4366e+06 1.66458e+07 170 1.66454e+07 1.52066e+07 0.00366709 1.66374e+07 49.9881 0.00278911 0.995539 0 50.1514 GTEX-1LGRB-0926-SM-COH3K 0 B1 6 pieces; well trimmed with trivial internal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 200 681 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993088 215293 0.972129 0.994205 0.801414 22652 1 76 0.00346751 197 0 7.86395e+07 0.0276901 677927 7.90979e+07 8.10059e+06 22675 3.91994e+07 0 0.170715 0.994205 0.79677 7.86395e+07 0.0040951 1.72275e+07 7.99909e+06 1.73303e+07 189 1.72929e+07 1.30083e+07 0.00378095 1.73535e+07 50.0874 0.00857073 0.995321 0 50.1486 GTEX-1LGRB-1026-SM-CNPQD 0 B1 2 pieces; includes up to ~10% fat 8.7 Heart Heart - Atrial Appendage 0006631 199 682 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.988181 418054 0.971315 0.990587 0.825792 22634 1 76 0.00520803 272 0 1.19858e+08 0.0279755 2.26916e+06 1.20997e+08 2.67716e+07 22655 5.96301e+07 0 0.145522 0.990587 0.818019 1.19858e+08 0.00789251 2.49328e+07 2.37718e+07 2.52172e+07 309 2.51357e+07 1.92709e+07 0.00654701 2.52401e+07 50.1036 0.0187539 0.992993 0 50.2836 GTEX-1LGRB-1126-SM-CNPP2 1 B1 2 pieces; focal, mild interstitial fibrosis 8.5 Heart Heart - Left Ventricle 0006566 206 675 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.987515 449752 0.984196 0.990085 0.858356 23198 1 76 0.00550567 279 0 1.45698e+08 0.0155179 3.01622e+06 1.47157e+08 3.70659e+07 23221 7.25007e+07 0 0.12584 0.990085 0.849845 1.45698e+08 0.00794255 3.17719e+07 3.37026e+07 3.24109e+07 327 3.22603e+07 2.42356e+07 0.00672095 3.22012e+07 49.9542 0.0204966 0.992655 0 50.4977 GTEX-1LGRB-1226-SM-CNNPS 1 B1 2 pieces; nodular goiter 7.2 Thyroid Thyroid 0002046 222 659 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992731 251613 0.974417 0.994576 0.824607 24644 1 76 0.00232263 277 0 1.13919e+08 0.0251901 538746 1.14541e+08 1.21414e+07 24678 5.67506e+07 0 0.14981 0.994576 0.820134 1.13919e+08 0.00339617 2.50518e+07 1.0403e+07 2.53136e+07 323 2.53204e+07 2.01488e+07 0.0028584 2.52306e+07 49.9111 0.00470353 0.996421 0 50.26 GTEX-1LGRB-1426-SM-CNNPT 1 B1 6 pieces; 3 are full thickness, 3 are mucosa/submucosa 7.8 Colon Colon - Transverse 0001157 241 640 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990228 283098 0.97218 0.992285 0.802043 25044 1 76 0.00278753 284 0 1.2126e+08 0.0261281 2.44938e+06 1.22203e+08 1.35511e+07 25088 6.03002e+07 0 0.170137 0.992285 0.795856 1.2126e+08 0.00365964 2.69293e+07 1.71333e+07 2.71929e+07 315 2.72086e+07 1.75891e+07 0.00322268 2.71274e+07 49.9253 0.0200435 0.994342 0 50.2435 GTEX-1LGRB-1526-SM-COH4I 1 B1 6 pieces; target muscularis, small leiomyoma (1.2mm) 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 242 639 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993439 246313 0.97601 0.994351 0.835325 20718 1 76 0.00330719 147 0 6.24432e+07 0.0236883 484945 6.2798e+07 6.18922e+06 20734 3.11171e+07 0 0.140685 0.994351 0.830606 6.24432e+07 0.00377575 1.35445e+07 4.93219e+06 1.36124e+07 148 1.35922e+07 1.09161e+07 0.00354125 1.3617e+07 50.0456 0.00772231 0.995263 0 50.125 GTEX-1LGRB-1626-SM-CNNR7 1 B1 6 pieces; includes several clusters of submucosal glands and few lymphoid aggregates, focal acute exudate with apparent fungal organisms, 1.9mm leiomyoma 9.9 Esophagus Esophagus - Mucosa 0006920 246 635 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991001 362526 0.977393 0.992854 0.837223 24648 1 76 0.00241974 299 0 1.33919e+08 0.0219525 855848 1.34882e+08 1.50291e+07 24675 6.66873e+07 0 0.140169 0.992854 0.831241 1.33919e+08 0.00339229 3.01389e+07 1.95841e+07 3.03487e+07 326 3.04176e+07 2.735e+07 0.00290511 3.03015e+07 49.9044 0.00634514 0.994706 0 50.1734 GTEX-1LGRB-1726-SM-CNNRA 1 B1 6 pieces; chronic active gastritis 6.4 Stomach Stomach 0000945 256 625 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991618 210087 0.975504 0.993477 0.82279 24041 1 76 0.00258393 293 0 1.09166e+08 0.0238621 3.06833e+06 1.09882e+08 1.1848e+07 24069 5.43713e+07 0 0.152715 0.993477 0.817423 1.09166e+08 0.00370416 2.44108e+07 2.95968e+07 2.47719e+07 316 2.47251e+07 1.7249e+07 0.003143 2.4629e+07 49.9026 0.0279237 0.995336 0 50.3671 GTEX-1LGRB-1826-SM-CNPQL 1 B1 2 pieces; 50 and 70% fat, remainder is stroma with benign ducts and lobules 6.9 Breast Breast - Mammary Tissue 0008367 255 626 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983758 279107 0.969849 0.987287 0.773739 24523 1 76 0.00579046 146 0 7.95182e+07 0.0297789 411978 8.05421e+07 2.13293e+07 24555 3.95035e+07 0 0.19611 0.987287 0.763902 7.95182e+07 0.00891016 1.73762e+07 8.50588e+06 1.75135e+07 158 1.7561e+07 1.2658e+07 0.00734474 1.75919e+07 50.044 0.00511506 0.990816 0 50.1966 GTEX-1LGRB-2026-SM-COH47 1 B1 6 pieces; target muscularis, some with residual attached submucosa and fat 8.1 Colon Colon - Sigmoid 0001159 281 600 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993974 217971 0.973005 0.994925 0.810216 23084 1 76 0.00317722 225 0 9.04676e+07 0.026709 494501 9.0929e+07 8.30263e+06 23109 4.51055e+07 0 0.162789 0.994925 0.806104 9.04676e+07 0.0038916 1.9738e+07 7.43932e+06 1.97846e+07 240 1.97616e+07 1.61531e+07 0.00353407 1.98444e+07 50.1045 0.00543832 0.995877 0 50.0589 GTEX-1LGRB-2126-SM-COH48 0 B1 6 pieces; squamous mucosa is visible on 5 pieces, deep fat present on 3 7.2 Vagina Vagina 0000996 273 608 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993331 534815 0.961184 0.994385 0.769315 23480 1 76 0.00340608 172 0 8.63347e+07 0.0385363 198286 8.68222e+07 8.81566e+06 23510 4.3031e+07 0 0.191869 0.994385 0.764995 8.63347e+07 0.00394969 1.87704e+07 1.83136e+07 1.88969e+07 192 1.88856e+07 1.46033e+07 0.0036776 1.88847e+07 49.9989 0.00228382 0.995439 0 50.168 GTEX-1LGRB-2226-SM-CNNQI 0 B1 2 pieces; myometrium, prominent vessels, no endometrium in these sections 8.4 Uterus Uterus 0000995 294 587 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993026 246824 0.974252 0.994795 0.836911 23474 1 76 0.00218537 385 0 1.16533e+08 0.0253736 217744 1.17142e+08 1.21936e+07 23506 5.80549e+07 0 0.137341 0.994795 0.832555 1.16533e+08 0.00334695 2.56079e+07 1.09474e+07 2.58448e+07 337 2.58481e+07 2.25024e+07 0.00276513 2.58001e+07 49.9536 0.0018588 0.996565 0 50.2302 GTEX-1LGRB-2326-SM-CNNPU 1 B1 2 pieces; several corpora albicantia 8.3 Ovary Ovary 0000992 296 585 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992204 237030 0.972696 0.994284 0.799129 23410 1 76 0.0022497 283 0 9.70318e+07 0.0269433 210221 9.75897e+07 1.04176e+07 23453 4.83199e+07 0 0.173568 0.994284 0.794561 9.70318e+07 0.00340337 2.13895e+07 9.83102e+06 2.16061e+07 259 2.16421e+07 1.92345e+07 0.00282533 2.15463e+07 49.8891 0.00215413 0.996364 0 50.2519 GTEX-1LGRB-2426-SM-CNPP3 1 B1 2 pieces; mature fat, 1 piece has large central defect 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 372 509 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984487 297098 0.971542 0.987691 0.780549 24253 1 76 0.00586361 169 0 8.81991e+07 0.0281961 987384 8.92982e+07 2.40521e+07 24288 4.384e+07 0 0.190993 0.987691 0.770941 8.81991e+07 0.00834524 1.92248e+07 1.01453e+07 1.9477e+07 183 1.95567e+07 1.34332e+07 0.0071004 1.94073e+07 49.8083 0.0110571 0.990894 0 50.3257 GTEX-1LGRB-2526-SM-CNPPQ 1 B1 6 pieces; skin with up to ~10% internal fat, epidermis measures 25-35 microns 8 Skin Skin - Sun Exposed (Lower leg) 0004264 381 500 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986046 230141 0.973614 0.988785 0.783818 23455 1 76 0.0056849 212 0 8.16413e+07 0.0261643 542583 8.25673e+07 2.07944e+07 23479 4.0608e+07 0 0.189796 0.988785 0.775028 8.16413e+07 0.00820363 1.77106e+07 9.79662e+06 1.78569e+07 168 1.79061e+07 1.35078e+07 0.00694078 1.7873e+07 49.9538 0.0065714 0.991525 0 50.2058 GTEX-1LGRB-2626-SM-CNPPR 0 B1 2 pieces; skeletal muscle with small portion of attached and internal fat, scattered fibers with degenerative change 8.4 Muscle Muscle - Skeletal 0011907 399 482 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.987034 430335 0.984159 0.989502 0.883207 21942 1 76 0.00531976 396 0 1.41297e+08 0.015589 1.49327e+06 1.42796e+08 3.53612e+07 21954 7.03272e+07 0 0.100952 0.989502 0.873935 1.41297e+08 0.00780791 3.08718e+07 2.30737e+07 3.12662e+07 345 3.13123e+07 2.91465e+07 0.00656073 3.11291e+07 49.8533 0.0104574 0.99197 0 50.3174 GTEX-1LGRB-2726-SM-COH45 1 B1 2 pieces; medial calcific sclerosis, intimal thickening 7.8 Blood Vessel Artery - Tibial 0007610 421 460 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992761 258899 0.975888 0.993754 0.810862 22311 1 76 0.00353809 171 0 8.26398e+07 0.0237107 219553 8.31593e+07 9.02581e+06 22331 4.11736e+07 0 0.165027 0.993754 0.805797 8.26398e+07 0.00390385 1.80441e+07 5.99169e+06 1.81375e+07 190 1.8143e+07 1.52593e+07 0.00372079 1.81211e+07 49.9698 0.00264015 0.994748 0 50.1292 GTEX-1LGRB-2826-SM-COH46 1 B1 2 pieces; nerve with from 10-40% attached fat 7.3 Nerve Nerve - Tibial 0001323 409 472 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991925 256115 0.96849 0.993141 0.739549 23439 1 76 0.00362282 146 0 6.7378e+07 0.0312548 204756 6.78433e+07 7.45958e+06 23472 3.35618e+07 0 0.228941 0.993141 0.734476 6.7378e+07 0.00423196 1.48671e+07 6.1269e+06 1.48991e+07 141 1.492e+07 1.09424e+07 0.00392702 1.49264e+07 50.0107 0.00301807 0.994356 0 50.0539 GTEX-1LH75-0006-SM-CXZIP B1 8.1 Blood Whole Blood 0013756 1001 BP-62691 RNA isolation_PAXgene Blood RNA (Manual) 04/21/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.968754 612736 0.973563 0.970215 0.797358 18929 1 76 0.00184398 127 0 1.0655e+08 0.0252351 303592 1.09821e+08 7.01434e+06 18934 5.30235e+07 0 0.176205 0.970215 0.773609 1.0655e+08 0.00337933 2.43907e+07 1.76218e+08 2.51019e+07 157 2.50488e+07 2.79551e+07 0.0026105 2.46236e+07 49.572 0.00276443 0.971675 0 50.7185 GTEX-1LH75-0011-R2b-SM-EYYWQ B1, A1 6.9 Brain Brain - Substantia nigra 0002038 995 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.987166 238287 0.966864 0.989719 0.841863 23742 1 76 0.00230335 272 0 7.73917e+07 0.0327387 3.41453e+06 7.81956e+07 3.11066e+06 23761 3.85006e+07 0 0.125001 0.989719 0.833208 7.73917e+07 0.0029793 1.70075e+07 8.72514e+06 1.7296e+07 271 1.72213e+07 9.82271e+06 0.00264046 1.72482e+07 50.0391 0.0436666 0.992272 0 50.4205 GTEX-1LH75-0011-R6a-SM-EXURS B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 995 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992312 530284 0.960148 0.99289 0.820946 24047 1 76 0.00175557 160 0 6.90764e+07 0.0394608 3.07475e+06 6.9571e+07 2.65994e+06 24066 3.43898e+07 0 0.139202 0.99289 0.815109 6.90764e+07 0.00220915 1.51287e+07 6.61277e+06 1.52328e+07 200 1.52322e+07 9.3793e+06 0.00198223 1.51645e+07 49.8887 0.0441958 0.993467 0 50.1714 GTEX-1LH75-0011-R7a-SM-EXOIF B1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 995 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989147 438709 0.963211 0.991323 0.836197 25102 1 76 0.00202913 271 0 1.05229e+08 0.0365052 6.7861e+06 1.0615e+08 6.33692e+06 25127 5.23668e+07 0 0.127014 0.991323 0.828942 1.05229e+08 0.00310911 2.30127e+07 1.28141e+07 2.33459e+07 324 2.33006e+07 1.25345e+07 0.00256793 2.32549e+07 49.951 0.0639292 0.9935 0 50.3593 GTEX-1LH75-0426-SM-E9TJF 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic damage; microinfarct, ~0.6mm, encircled 7.4 Heart Heart - Left Ventricle 0006566 1029 796 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987736 480408 0.982153 0.98956 0.847984 21196 1 76 0.00183161 202 0 8.38977e+07 0.0176187 2.30089e+06 8.47828e+07 3.62649e+06 21213 4.17513e+07 0 0.134169 0.98956 0.839131 8.38977e+07 0.00237937 1.86625e+07 8.33461e+06 1.88183e+07 230 1.88526e+07 1.48857e+07 0.00210499 1.87636e+07 49.8817 0.0271386 0.991384 0 50.2079 GTEX-1LH75-0526-SM-DIPG2 1 B1 2 pieces, no abnormalities 7.2 Heart Heart - Atrial Appendage 0006631 1033 792 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99262 505487 0.979135 0.993987 0.803904 22999 1 76 0.00200774 371 0 1.13172e+08 0.0206352 1.89797e+06 1.13856e+08 8.65481e+06 23031 5.63894e+07 0 0.175231 0.993987 0.799071 1.13172e+08 0.00319551 2.43476e+07 1.37672e+07 2.45307e+07 337 2.45736e+07 1.80671e+07 0.00260081 2.44351e+07 49.8587 0.0166699 0.995354 0 50.1873 GTEX-1LH75-0626-SM-DIPG3 1 B1 2 pieces, no abnormalities 6.6 Thyroid Thyroid 0002046 1039 786 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992584 482104 0.96723 0.993852 0.733578 25258 1 76 0.00227706 274 0 1.07716e+08 0.0324905 467134 1.08382e+08 8.20448e+06 25316 5.36499e+07 0 0.233652 0.993852 0.729068 1.07716e+08 0.00349851 2.36207e+07 9.80047e+06 2.36564e+07 277 2.3691e+07 1.61827e+07 0.00288701 2.37165e+07 50.0269 0.00431007 0.99512 0 50.0377 GTEX-1LH75-0626-SM-DKTRU 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 1039 786 BP-78323 DNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1LH75-0626-SM-DLT2J 1 B1 2 pieces, no abnormalities Thyroid Thyroid 0002046 1039 786 BP-78323 DNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LH75-0726-SM-DIPG4 2 B1 4 pieces, target squamous mucosa up to ~0.25mm, sloughing 6.7 Esophagus Esophagus - Mucosa 0006920 1051 774 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 EXCLUDE 0.992734 430604 0.970221 0.993799 0.784891 24036 1 76 0.00234666 275 0 9.56899e+07 0.029548 731887 9.6287e+07 7.50238e+06 24073 4.76728e+07 0 0.18533 0.993799 0.780024 9.56899e+07 0.00303214 2.084e+07 8.40168e+06 2.09372e+07 278 2.0912e+07 1.51767e+07 0.00268903 2.09666e+07 50.0651 0.0076011 0.994864 0 50.1164 GTEX-1LH75-0926-SM-EAZ5C 1 B1 2 pieces, moderate passive congestion 7 Liver Liver 0001114 1056 769 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988342 455832 0.979828 0.989415 0.85099 20907 1 76 0.00214744 271 0 9.60786e+07 0.0198678 1.71074e+06 9.71065e+07 8.26807e+06 20927 4.78502e+07 0 0.128838 0.989415 0.841983 9.60786e+07 0.00324531 2.10317e+07 1.34968e+07 2.12724e+07 296 2.12108e+07 1.75372e+07 0.00269578 2.11877e+07 49.9727 0.0176171 0.990488 0 50.2845 GTEX-1LH75-1026-SM-EWROK 1 B1 2 pieces, fascia/mesothelial hyperplasia, vascular elements are ~10% of tissue, rep delineated 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1060 765 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987338 249304 0.980869 0.990083 0.849282 22324 1 76 0.00229141 212 0 8.24913e+07 0.0188205 534225 8.33175e+07 5.76448e+06 22339 4.10387e+07 0 0.131587 0.990083 0.84086 8.24913e+07 0.00292345 1.81283e+07 8.39808e+06 1.83701e+07 209 1.8381e+07 1.66386e+07 0.00259916 1.83238e+07 49.9221 0.00641192 0.992829 0 50.3312 GTEX-1LH75-1626-SM-EWROL 1 B1 2 pieces. myometrium 7 Uterus Uterus 0000995 1084 741 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.982886 320267 0.975374 0.986616 0.834702 22467 1 76 0.00231442 176 0 8.51643e+07 0.0243265 178041 8.63196e+07 5.8718e+06 22485 4.23004e+07 0 0.140671 0.986616 0.823531 8.51643e+07 0.00329346 1.82862e+07 7.65423e+06 1.85719e+07 199 1.85544e+07 1.72826e+07 0.00279064 1.85971e+07 50.0575 0.00206258 0.990345 0 50.3875 GTEX-1LH75-1726-SM-DHXKZ 2 B1 6 pieces, squamous mucosa sloughing, up to ~70 microns 7.7 Vagina Vagina 0000996 1087 738 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991691 423345 0.971985 0.992415 0.746216 25168 1 76 0.00269084 218 0 9.96816e+07 0.027253 298548 1.00443e+08 5.66654e+06 25207 4.96289e+07 0 0.225769 0.992415 0.740556 9.96816e+07 0.0028868 2.21886e+07 1.07818e+07 2.23809e+07 247 2.23798e+07 1.79316e+07 0.00278875 2.22635e+07 49.8697 0.0029723 0.993139 0 50.2157 GTEX-1LH75-1926-SM-DIPGD 3 B1 6 pieces, advanced mucosal glandular autolysis; target lymphoid aggregates are ~10% of tissue, delineated 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 1100 725 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.991925 487138 0.970775 0.993232 0.78977 24831 1 76 0.00225402 376 0 1.0737e+08 0.0289736 981429 1.08101e+08 8.39289e+06 24879 5.34828e+07 0 0.181005 0.993232 0.784425 1.0737e+08 0.00336795 2.34604e+07 1.05184e+07 2.36562e+07 337 2.36486e+07 1.77145e+07 0.00281025 2.36007e+07 49.9493 0.00907878 0.994538 0 50.2077 GTEX-1LH75-2026-SM-EVR5E 1 B1 "6 pieces, confirmed target muscularis; trace ""contaminant squamous mucosa, <1mm nubbin, delineated" 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 1106 719 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986122 251705 0.971719 0.988037 0.793007 23651 1 76 0.00227761 208 0 8.86711e+07 0.028011 468761 8.97447e+07 6.94899e+06 23685 4.4113e+07 0 0.178712 0.988037 0.78352 8.86711e+07 0.00355929 1.90891e+07 6.94152e+06 1.93546e+07 223 1.9304e+07 1.55932e+07 0.00291721 1.92988e+07 49.9931 0.00522327 0.989952 0 50.3453 GTEX-1LH75-2126-SM-EVR5F 3 B1 6 pieces, target mucosa up to ~0.4mm, complete glandular mucosal autolysis, remnant lamina propria intact 6.1 Colon Colon - Transverse 0001157 1112 713 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.985297 173412 0.975326 0.987348 0.834778 23827 1 76 0.00213174 207 0 8.04509e+07 0.0242831 860010 8.14818e+07 5.86175e+06 23848 4.00157e+07 0 0.140548 0.987348 0.824216 8.04509e+07 0.00355349 1.758e+07 7.09703e+06 1.77474e+07 212 1.76963e+07 1.42402e+07 0.00284114 1.77886e+07 50.13 0.0105546 0.989399 0 50.2369 GTEX-1LH75-2326-SM-E6CIV 0 B1 2 pieces, trace partial rim of adherent fat up to ~0.5mm, rep delineated 7.4 Nerve Nerve - Tibial 0001323 1117 708 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991727 341568 0.970175 0.993195 0.756751 24191 1 76 0.00199271 187 0 8.38722e+07 0.0294955 240727 8.44469e+07 5.29842e+06 24233 4.17538e+07 0 0.213424 0.993195 0.751602 8.38722e+07 0.00281214 1.84241e+07 6.39906e+06 1.85412e+07 193 1.8476e+07 1.44618e+07 0.00240182 1.8602e+07 50.1699 0.00285063 0.994664 0 50.1584 GTEX-1LH75-2426-SM-E9TJE 0 B1 6 pieces, minimal dermal fat; squamous epithelium up to ~35 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1118 707 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983171 179070 0.973777 0.98468 0.751629 22556 1 76 0.00208352 164 0 6.7739e+07 0.0260379 309864 6.87929e+07 2.79914e+06 22587 3.37214e+07 0 0.222148 0.98468 0.740114 6.7739e+07 0.00254205 1.48972e+07 5.98337e+06 1.50061e+07 154 1.49683e+07 1.07181e+07 0.00231243 1.50309e+07 50.1043 0.0045043 0.986189 0 50.1821 GTEX-1LH75-2526-SM-E9U5A 0 B1 3 pieces (fragemented), ~10% fascia/vascular elements, rep delineated 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 1119 706 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.988167 230058 0.975289 0.989068 0.782228 22301 1 76 0.00179983 166 0 7.58264e+07 0.024433 747659 7.66645e+07 2.6607e+06 22332 3.77952e+07 0 0.193061 0.989068 0.773676 7.58264e+07 0.00280741 1.67606e+07 6.74962e+06 1.68603e+07 184 1.68266e+07 1.27251e+07 0.00230316 1.68626e+07 50.0534 0.00975235 0.989969 0 50.1483 GTEX-1LH75-2626-SM-E9TKL 0 B1 2 pieces, ~10% interstital fat/vascular elements 7.8 Muscle Muscle - Skeletal 0011907 1120 705 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98894 310917 0.983988 0.990574 0.869579 18545 1 76 0.00172924 136 0 5.85972e+07 0.0157518 591357 5.91548e+07 2.38251e+06 18556 2.91668e+07 0 0.11441 0.990574 0.861382 5.85972e+07 0.00227647 1.25974e+07 5.20891e+06 1.27219e+07 144 1.27106e+07 1.27799e+07 0.0020024 1.26919e+07 49.9633 0.00999676 0.992208 0 50.2458 GTEX-1LH75-3026-SM-EV7A8 1 B1 1 piece, ~80% adenohypophysis; ~20% neurohypophysis, delineated, 3.5 x1.5mm nubbin 7.7 Pituitary Pituitary 0000007 1164 661 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991049 600637 0.958433 0.992154 0.74616 27243 1 76 0.00234393 275 0 1.36508e+08 0.041231 463316 1.37588e+08 1.43304e+07 27307 6.79974e+07 0 0.212273 0.992154 0.740305 1.36508e+08 0.00374637 2.70098e+07 1.93523e+07 2.71944e+07 311 2.72395e+07 2.38677e+07 0.00304437 2.71044e+07 49.8757 0.00336742 0.993258 0 50.1703 GTEX-1LKK1-0005-SM-CXZIT B1 8.6 Blood Whole Blood 0013756 675 BP-62819 RNA isolation_PAXgene Blood RNA (Manual) 04/24/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.948424 696814 0.983988 0.949425 0.814347 17029 1 76 0.00185878 261 0 1.74178e+08 0.0146143 344504 1.83457e+08 1.06147e+07 17034 8.67125e+07 0 0.169642 0.949425 0.773161 1.74178e+08 0.00266173 4.18703e+07 3.90899e+08 4.23433e+07 280 4.24025e+07 5.64542e+07 0.00225984 4.2015e+07 49.7705 0.00187785 0.950425 0 50.2808 GTEX-1LKK1-0011-R11a-SM-EXOIG B1, A1 5.6 Brain Brain - Cerebellar Hemisphere 0002037 660 BP-79941 RNA isolation_PAXgene Tissue miRNA 10/28/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984412 265402 0.96221 0.986798 0.828535 21681 1 76 0.00191724 370 0 9.34297e+07 0.037662 8.13956e+06 9.46796e+07 5.33984e+06 21710 4.64808e+07 0 0.133675 0.986798 0.817597 9.34297e+07 0.00331924 2.03344e+07 1.78956e+07 2.08347e+07 341 2.05423e+07 5.6677e+06 0.00261654 2.07983e+07 50.3097 0.0859696 0.989184 0 50.6076 GTEX-1LKK1-0626-SM-DKTRX 0 B1 2 pieces, no abnormalities Heart Heart - Atrial Appendage 0006631 878 756 BP-79432 DNA Extraction from Paxgene-derived Lysate Plate Based 10/13/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1LKK1-0626-SM-DLT2M 0 B1 2 pieces, no abnormalities Heart Heart - Atrial Appendage 0006631 878 756 BP-79432 DNA Extraction from Paxgene-derived Lysate Plate Based 10/13/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LKK1-1126-SM-DKPQD 2 B1 6 pieces, calcifed atherosis (rep delineated) up to ~1mm 5.5 Blood Vessel Artery - Aorta 0001496 912 722 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989596 350833 0.961666 0.991489 0.769992 22869 1 76 0.00308252 203 0 9.16865e+07 0.0380061 429078 9.24736e+07 1.04233e+07 22900 4.56174e+07 0 0.191674 0.991489 0.763438 9.16865e+07 0.00311159 1.94478e+07 1.78941e+07 1.96425e+07 209 1.96018e+07 1.57518e+07 0.00309703 1.96638e+07 50.079 0.00464001 0.993382 0 50.249 GTEX-1LKK1-1526-SM-EVYCO 1 B1 2 pieces, trace fascia 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 922 712 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989292 277511 0.977281 0.989863 0.816449 22647 1 76 0.00203814 208 0 8.51605e+07 0.0221508 1.0006e+06 8.60327e+07 3.89982e+06 22667 4.24342e+07 0 0.160833 0.989863 0.808172 8.51605e+07 0.00299667 1.86661e+07 9.49939e+06 1.89044e+07 237 1.88135e+07 1.39881e+07 0.00251713 1.88094e+07 49.9945 0.0116305 0.990434 0 50.3171 GTEX-1LKK1-1626-SM-EVR4Y 1 B1 2 pieces, post menopausal atrophy 6.7 Ovary Ovary 0000992 933 701 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988442 224711 0.97167 0.99035 0.729251 22976 1 76 0.00214673 217 0 9.72599e+07 0.0280697 95083 9.82076e+07 6.87035e+06 23036 4.84073e+07 0 0.242419 0.99035 0.722214 9.72599e+07 0.00348433 2.12767e+07 1.13693e+07 2.14931e+07 203 2.14472e+07 1.91406e+07 0.00281425 2.14992e+07 50.0606 0.000968184 0.992258 0 50.253 GTEX-1LKK1-2426-SM-DIPES 2 B1 6 pieces, confirmed target muscularis, unusually advanced autolysis; 'contaminant' autolyzed mucosa is ~10% of tissue, rep delineated 5.9 Colon Colon - Sigmoid 0001159 967 667 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992077 262474 0.972636 0.993115 0.800901 23609 1 76 0.00228473 378 0 1.07218e+08 0.0271382 1.03443e+06 1.07961e+08 8.6129e+06 23645 5.34162e+07 0 0.171735 0.993115 0.795387 1.07218e+08 0.00310314 2.32511e+07 1.14159e+07 2.34923e+07 349 2.34156e+07 1.77531e+07 0.00269351 2.34479e+07 50.0344 0.00958153 0.994152 0 50.258 GTEX-1LKK1-2626-SM-DKPQE 0 B1 6 pieces, moderate adherent/interstitial dermal fat up to ~1.5mm, rep delineated; squamous epithelium is ~25 microns 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 973 661 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991426 255661 0.976212 0.993565 0.804131 23187 1 76 0.0026172 387 0 1.04953e+08 0.0235887 957328 1.05633e+08 1.04519e+07 23224 5.22696e+07 0 0.172081 0.993565 0.798956 1.04953e+08 0.00310323 2.30328e+07 1.32061e+07 2.32487e+07 333 2.32493e+07 1.73059e+07 0.00285969 2.32407e+07 49.9907 0.00906276 0.995704 0 50.2333 GTEX-1LKK1-2926-SM-EVR4Z 1 B1 2 pieces, glandular elements are~95% of specimen 7.4 Salivary Gland Minor Salivary Gland 0006330 979 655 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987888 265246 0.975084 0.989965 0.785063 24191 1 76 0.00225784 283 0 1.09337e+08 0.0245162 483263 1.10445e+08 8.6206e+06 24228 5.44232e+07 0 0.190022 0.989965 0.777185 1.09337e+08 0.00324942 2.45514e+07 1.86724e+07 2.48432e+07 316 2.48484e+07 1.75219e+07 0.00275259 2.47584e+07 49.9093 0.00437559 0.992043 0 50.2954 GTEX-1LKK1-3026-SM-EAZ3W 2 B1 1 piece, ~15-20% neurohypophysis, delineated; rest is adenohypophysis; partial rim of adherent dura up to ~1.5mm 5.5 Pituitary Pituitary 0000007 1045 589 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988697 987659 0.943037 0.989618 0.703683 25585 1 76 0.00217458 207 0 9.48943e+07 0.0567418 891373 9.58898e+07 8.25933e+06 25635 4.7254e+07 0 0.239354 0.989618 0.696377 9.48943e+07 0.00293252 2.01445e+07 3.08165e+07 2.03933e+07 227 2.03641e+07 1.19337e+07 0.0025532 2.02838e+07 49.9013 0.00929581 0.990539 0 50.3069 GTEX-1LKK1-3126-SM-EWRNY 1 B1 2 pieces, no abnormalities 5.8 Brain Brain - Cortex 0001870 1046 588 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984408 432919 0.965587 0.988538 0.82966 24376 1 76 0.00229808 372 0 9.48621e+07 0.0341564 4.96452e+06 9.59621e+07 6.67849e+06 24401 4.71327e+07 0 0.135927 0.988538 0.82015 9.48621e+07 0.00336449 2.07621e+07 1.35517e+07 2.10557e+07 346 2.10574e+07 1.10101e+07 0.0028166 2.10977e+07 50.0478 0.0517342 0.992667 0 50.351 GTEX-1LNCM-0004-SM-DE1JR B1 Blood Whole Blood 0013756 429 BP-62874 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/27/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LNCM-0004-SM-DJWYR B1 Blood Whole Blood 0013756 429 BP-62874 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/27/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LNCM-0005-SM-CXZIR B1 8 Blood Whole Blood 0013756 429 BP-62901 RNA isolation_PAXgene Blood RNA (Manual) 04/27/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990702 699707 0.96661 0.992105 0.73795 20424 1 76 0.00233067 159 0 1.06041e+08 0.0329247 250555 1.06885e+08 6.58058e+06 20448 5.28143e+07 0 0.228661 0.992105 0.732123 1.06041e+08 0.00330374 2.35246e+07 6.61359e+07 2.39807e+07 201 2.40114e+07 2.04086e+07 0.00281652 2.36483e+07 49.6191 0.00234416 0.993508 0 50.48 GTEX-1LNCM-0226-SM-DIPF4 1 B1 2 pieces; 70 and 30% fat with dense stroma and ducts and lobules with focal microcalcification, sclerosing adenosis 6.3 Breast Breast - Mammary Tissue 0008367 462 987 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992218 318200 0.975143 0.993377 0.732414 24876 1 76 0.00240747 212 0 9.80083e+07 0.0243466 604704 9.86618e+07 7.81884e+06 24933 4.88065e+07 0 0.24273 0.993377 0.727563 9.80083e+07 0.00324242 2.16795e+07 9.36103e+06 2.18344e+07 228 2.18386e+07 1.49293e+07 0.00282446 2.17874e+07 49.9414 0.00612906 0.994535 0 50.178 GTEX-1LNCM-0326-SM-DIPF5 1 B1 6 pieces; atherosclerosis 7.4 Blood Vessel Artery - Aorta 0001496 470 979 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993186 469922 0.978777 0.994417 0.831981 21978 1 76 0.00219877 208 0 9.39521e+07 0.0208166 116790 9.44796e+07 7.38421e+06 21999 4.67962e+07 0 0.146796 0.994417 0.827336 9.39521e+07 0.00338045 2.02485e+07 7.18453e+06 2.03024e+07 220 2.03191e+07 1.93764e+07 0.00278888 2.03459e+07 50.0329 0.00123614 0.995647 0 50.0664 GTEX-1LNCM-0426-SM-DHXK6 1 B1 2 pieces; includes portion of capsule (target is 5mm below capsule), some congestion 5.5 Spleen Spleen 0002106 472 977 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991883 312616 0.955782 0.992552 0.725798 23080 1 76 0.00261383 119 0 6.15926e+07 0.0439412 514868 6.20548e+07 3.5322e+06 23110 3.06841e+07 0 0.229984 0.992552 0.720392 6.15926e+07 0.00295473 1.33484e+07 1.0482e+07 1.35278e+07 137 1.34966e+07 8.33002e+06 0.00278416 1.34257e+07 49.8685 0.00829699 0.99322 0 50.3336 GTEX-1LNCM-0626-SM-EV7AI 2 B1 6 pieces; mucosa is entirely sloughed on 1 piece which predominantly consists of autolyzed submucosal glands 7.2 Esophagus Esophagus - Mucosa 0006920 483 966 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988594 329633 0.973071 0.989535 0.788891 23136 1 76 0.00236205 275 0 9.77713e+07 0.0267428 628820 9.88052e+07 1.03893e+07 23164 4.8731e+07 0 0.18418 0.989535 0.780636 9.77713e+07 0.00346672 2.19236e+07 1.135e+07 2.20751e+07 290 2.2023e+07 1.6205e+07 0.00291386 2.20689e+07 50.052 0.00636424 0.990477 0 50.1722 GTEX-1LNCM-0726-SM-DKPQ5 1 B1 6 pieces 5.8 Esophagus Esophagus - Muscularis 0004648 486 963 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.990875 276440 0.969906 0.992891 0.771697 23102 1 76 0.00288906 199 0 9.02838e+07 0.0298126 304725 9.09303e+07 9.53483e+06 23134 4.49401e+07 0 0.198209 0.992891 0.766211 9.02838e+07 0.00304749 1.97627e+07 1.0002e+07 1.99155e+07 209 1.99384e+07 1.50274e+07 0.00296812 1.99142e+07 49.9697 0.00335119 0.994907 0 50.1925 GTEX-1LNCM-0826-SM-DHXL6 2 B1 2 pieces; 1 piece includes ~30% attached fat 5.5 Adrenal Gland Adrenal Gland 0002369 490 959 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993447 223721 0.973297 0.994202 0.82886 22060 1 76 0.00227924 154 0 6.65416e+07 0.0265115 4.18627e+06 6.69296e+07 3.78226e+06 22077 3.31615e+07 0 0.144437 0.994202 0.824055 6.65416e+07 0.00248564 1.44615e+07 7.84972e+06 1.48566e+07 195 1.47631e+07 7.57239e+06 0.00238236 1.45961e+07 49.7157 0.0625473 0.994957 0 50.6739 GTEX-1LNCM-0926-SM-DHXK5 0 B1 2 pieces; 1 piece is ovarian stroma with corpora albicantia/fibrosa and cyst with focal calcification, 2nd is predominantly vessels 7.4 Ovary Ovary 0000992 496 953 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993181 408520 0.969634 0.994032 0.745533 24088 1 76 0.00228099 218 0 1.05195e+08 0.0300883 129096 1.05826e+08 5.63576e+06 24134 5.24165e+07 0 0.224102 0.994032 0.741083 1.05195e+08 0.00270105 2.30498e+07 1.10391e+07 2.32806e+07 252 2.32711e+07 2.06650e+07 0.00249084 2.3153e+07 49.8728 0.00121989 0.994882 0 50.249 GTEX-1LNCM-1026-SM-E9U5D 0 B1 6 pieces; squamous mucosa present on all pieces 5.9 Vagina Vagina 0000996 502 947 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.977702 215777 0.970821 0.97854 0.790894 23837 1 76 0.00202102 374 0 9.98079e+07 0.0289933 1.13215e+06 1.01997e+08 5.71313e+06 23864 4.97329e+07 0 0.179926 0.97854 0.773922 9.98079e+07 0.00287058 2.21286e+07 9.7862e+06 2.22948e+07 342 2.2197e+07 1.40928e+07 0.00244543 2.2313e+07 50.1304 0.0110999 0.979377 0 50.1871 GTEX-1LNCM-1126-SM-E9U5E 0 B1 6 pieces; includes up to ~50% mostly attached fat and large vessels, epidermis measures about 34 microns, one piece is only fat and vessel 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 512 937 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.98737 278484 0.972297 0.988295 0.771226 23991 1 76 0.00181969 166 0 7.53858e+07 0.0274642 390929 7.62787e+07 2.85502e+06 24021 3.75744e+07 0 0.201071 0.988295 0.762199 7.53858e+07 0.00273997 1.65904e+07 6.92315e+06 1.66841e+07 173 1.66532e+07 1.26068e+07 0.0022794 1.66879e+07 50.052 0.00512501 0.989221 0 50.1408 GTEX-1LNCM-1226-SM-E9U5C 1 B1 2 pieces; skeletal muscle with from 5-10% fat and tendon 7 Muscle Muscle - Skeletal 0011907 515 934 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.98985 215837 0.98187 0.990793 0.873428 18168 1 76 0.00148522 130 0 6.02681e+07 0.0179434 1.21229e+06 6.08281e+07 2.21442e+06 18173 3.00517e+07 0 0.108442 0.990793 0.865386 6.02681e+07 0.00244421 1.31428e+07 5.62867e+06 1.32492e+07 151 1.32061e+07 1.19181e+07 0.00196426 1.3231e+07 50.0472 0.0199297 0.991735 0 50.2015 GTEX-1LSNL-0004-SM-DE1KG B1 Blood Whole Blood 0013756 1147 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LSNL-0004-SM-DJWYH B1 Blood Whole Blood 0013756 1147 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LSNL-0006-SM-CXZIV B1 7.7 Blood Whole Blood 0013756 1147 BP-63050 RNA isolation_PAXgene Blood RNA (Manual) 05/01/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.986632 526264 0.979829 0.987991 0.772387 21111 1 76 0.00214704 276 0 1.24184e+08 0.0194893 591190 1.25693e+08 7.47186e+06 21136 6.18457e+07 0 0.207442 0.987991 0.763112 1.24184e+08 0.00314334 2.8289e+07 9.03631e+07 2.87129e+07 284 2.87131e+07 2.72886e+07 0.00264451 2.84656e+07 49.7835 0.00470344 0.98935 0 50.3718 GTEX-1LSNL-0011-R2a-SM-EZ6MK B1, A1 6.6 Brain Brain - Substantia nigra 0002038 1143 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989262 201422 0.973283 0.991008 0.85826 23527 1 76 0.00282174 379 0 9.87496e+07 0.0264652 9.72443e+06 9.96456e+07 7.32279e+06 23546 4.92057e+07 0 0.115023 0.991008 0.850543 9.87496e+07 0.00419059 2.1842e+07 1.54181e+07 2.22088e+07 336 2.20525e+07 1.0087e+07 0.00350496 2.21351e+07 50.0935 0.0975902 0.992754 0 50.4164 GTEX-1LSNL-0011-R7a-SM-EYYWI B1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1143 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.987793 445273 0.959189 0.990172 0.852303 21684 1 76 0.00264472 267 0 7.91324e+07 0.0406267 7.37680e+06 7.99178e+07 2.85162e+06 21695 3.93936e+07 0 0.106887 0.990172 0.843926 7.91324e+07 0.00330049 1.71423e+07 2.37173e+07 1.74357e+07 292 1.73323e+07 6.27985e+06 0.00297182 1.73858e+07 50.077 0.0923049 0.992551 0 50.4243 GTEX-1LSNL-0011-R9b-SM-EYYWK B1, A1 6.7 Brain Brain - Spinal cord (cervical c-1) 0006469 1143 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982607 204743 0.962063 0.986917 0.830056 22266 1 76 0.00236106 180 0 6.27426e+07 0.0376698 2.88207e+06 6.35743e+07 2.46847e+06 22285 3.11557e+07 0 0.132008 0.986917 0.819196 6.27426e+07 0.00411363 1.38384e+07 6.25794e+06 1.41062e+07 173 1.40409e+07 7.81902e+06 0.00323352 1.41544e+07 50.2013 0.0453338 0.991226 0 50.4791 GTEX-1LSNL-0126-SM-EWRNR 0 B1 2 pieces. Some fibrillar atrophy. Interstitial fat/vascular elements (rep delineated) are ~20% of tissue 8.1 Muscle Muscle - Skeletal 0011907 1278 985 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988591 290955 0.983718 0.9923 0.877297 18901 1 76 0.00231633 155 0 7.5597e+07 0.016017 862771 7.61836e+07 5.20318e+06 18910 3.75958e+07 0 0.106421 0.9923 0.870542 7.5597e+07 0.00297832 1.65157e+07 7.66878e+06 1.6633e+07 179 1.67294e+07 1.54929e+07 0.00263834 1.66516e+07 49.8835 0.0113249 0.996009 0 50.1769 GTEX-1LSNL-0226-SM-EVYCG 0 B1 6 pieces, minimal dermal fat (rep delineated); squamous epithelium is ~30 microns 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1278 985 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 EXCLUDE 0.953937 1.18466e+07 0.61901 0.955078 0.405909 21336 1 76 0.00157032 147 0 1.06295e+08 0.378026 1.55903e+06 1.11295e+08 4.56924e+06 21357 5.2864e+07 0 0.2131 0.955078 0.387675 1.06295e+08 0.0025007 1.42692e+07 4.62429e+08 1.54066e+07 125 1.53326e+07 8.57885e+06 0.00203496 1.45884e+07 48.7564 0.0140081 0.95622 0 51.9164 GTEX-1LSNL-0326-SM-EVYCH 0 B1 2 pieces, nubbins of adherent fibrous/fatty tissue up to ~2mm, rep delineated. Minimal atherosis 7.2 Blood Vessel Artery - Tibial 0007610 1279 984 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.986806 288464 0.976753 0.987434 0.811831 21792 1 76 0.00202161 173 0 7.79288e+07 0.0228585 625595 7.89205e+07 3.57499e+06 21818 3.88168e+07 0 0.164922 0.987434 0.801629 7.79288e+07 0.00317329 1.6898e+07 7.53606e+06 1.71084e+07 188 1.70186e+07 1.40109e+07 0.00259709 1.70408e+07 50.0326 0.0079269 0.988061 0 50.3093 GTEX-1LSNL-0426-SM-DIPFH 0 B1 2 pieces, trace adherent fat 6.3 Nerve Nerve - Tibial 0001323 1281 982 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992416 524503 0.967973 0.99367 0.735166 24486 1 76 0.00240473 206 0 9.17001e+07 0.03174 404229 9.22843e+07 6.83354e+06 24529 4.56648e+07 0 0.232807 0.99367 0.730512 9.17001e+07 0.00354024 2.02002e+07 8.44313e+06 2.02687e+07 213 2.02693e+07 1.34554e+07 0.00297177 2.03086e+07 50.0485 0.00438026 0.994923 0 50.0846 GTEX-1LSNL-0526-SM-DIPFI 0 B1 2 pieces, fascia/vascular elements up to ~20% of tissue, rep delineated 7 Adipose Tissue Adipose - Subcutaneous 0002190 1282 981 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311,LCSET-10535 01/26/2017 TruSeq.v1 RNASEQ 0.991942 475603 0.9761 0.993293 0.816295 24465 1 76 0.00213705 386 0 1.26422e+08 0.0235072 576626 1.27275e+08 7.33689e+06 24509 6.29669e+07 0 0.159805 0.993293 0.81082 1.26422e+08 0.00271106 2.77421e+07 1.24504e+07 2.7894e+07 368 2.79153e+07 2.40738e+07 0.00242367 2.78869e+07 49.9746 0.00453054 0.994643 0 50.1365 GTEX-1LSNL-0626-SM-DIPFJ 1 B1 2 pieces, no abnormalities 6.1 Heart Heart - Atrial Appendage 0006631 1290 973 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993175 234493 0.980871 0.99427 0.806678 23148 1 76 0.00275222 368 0 1.04049e+08 0.0188642 5.44486e+06 1.04649e+08 7.84914e+06 23181 5.186e+07 0 0.174193 0.99427 0.802056 1.04049e+08 0.00366974 2.3079e+07 1.59194e+07 2.35758e+07 344 2.35401e+07 9.95411e+06 0.00321047 2.32078e+07 49.6447 0.0520298 0.995365 0 50.5324 GTEX-1LSNL-1426-SM-E6CJ9 1 B1 2 pieces, trace fascia 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1336 927 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992931 206033 0.97908 0.994235 0.842337 23947 1 76 0.00210375 281 0 1.10613e+08 0.0205655 947807 1.11254e+08 6.89308e+06 23971 5.51002e+07 0 0.136742 0.994235 0.837481 1.10613e+08 0.00268668 2.43512e+07 1.07408e+07 2.46638e+07 320 2.45511e+07 1.86839e+07 0.00239483 2.45938e+07 50.0434 0.0085193 0.995539 0 50.3188 GTEX-1LSNL-1626-SM-E9TJY 1 B1 6 pieces, confirmed target muscularis; adherent serosal fat (rep delineated) is ~30-40% of specimen 5.8 Colon Colon - Sigmoid 0001159 1359 904 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.97271 266313 0.974764 0.974061 0.833522 23092 1 76 0.0022053 376 0 1.06816e+08 0.0249925 2.6744e+06 1.0966e+08 6.23439e+06 23116 5.31527e+07 0 0.141243 0.974061 0.811901 1.06816e+08 0.00317341 2.31072e+07 9.8719e+06 2.3413e+07 364 2.33004e+07 1.68152e+07 0.00268869 2.33602e+07 50.0641 0.0243881 0.975411 0 50.3286 GTEX-1LSNL-2226-SM-DHXKM 1 B1 6 pieces, squamous mucosa, early surface sloughing, up to ~0.2mm, submucosal mucus glands present, rep delineated 6.1 Esophagus Esophagus - Mucosa 0006920 1382 881 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993094 239409 0.97543 0.99372 0.812569 23069 1 76 0.00282676 201 0 8.62173e+07 0.0243335 1.21420e+06 8.67622e+07 6.30975e+06 23090 4.29795e+07 0 0.162861 0.99372 0.807466 8.62173e+07 0.00320518 1.9389e+07 9.57218e+06 1.96103e+07 253 1.95307e+07 1.22202e+07 0.00301585 1.95206e+07 49.987 0.0139946 0.994347 0 50.2836 GTEX-1LSNL-2326-SM-DHXKN 2 B1 2 pieces, glandular elements with moderately advanced autolysis, hyperplastic pattern 5.9 Prostate Prostate 0002367 1389 874 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991764 244517 0.966069 0.992627 0.752267 25303 1 76 0.00259328 211 0 8.61256e+07 0.0336737 1.44229e+06 8.67653e+07 5.12002e+06 25336 4.29188e+07 0 0.213802 0.992627 0.746721 8.61256e+07 0.00280979 1.90069e+07 1.29846e+07 1.93147e+07 221 1.92648e+07 1.22448e+07 0.00270144 1.91314e+07 49.8263 0.0166229 0.993491 0 50.4016 GTEX-1LSNL-2426-SM-DHXKO 2 B1 2 pieces, moderately advanced autolysis, spermatogenesis appears markedly reduced 6.8 Testis Testis 0000473 1394 869 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992074 460665 0.94188 0.992924 0.723968 33747 1 76 0.00249111 279 0 1.1308e+08 0.0578626 1.62632e+06 1.13886e+08 5.77886e+06 33824 5.63609e+07 0 0.217912 0.992924 0.718845 1.1308e+08 0.002951 2.41874e+07 1.45456e+07 2.43699e+07 286 2.43725e+07 1.66581e+07 0.00272086 2.42704e+07 49.8951 0.0142802 0.993775 0 50.188 GTEX-1LSNL-2626-SM-EV7AT 1 B1 piece, ~90% glandular parenchyma 7.9 Salivary Gland Minor Salivary Gland 0006330 1394 869 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986661 392468 0.976699 0.987749 0.809517 24413 1 76 0.00276389 292 0 1.28472e+08 0.0207491 364688 1.30066e+08 1.36854e+07 24449 6.38616e+07 0 0.167182 0.987749 0.7996 1.28472e+08 0.0039539 2.96029e+07 3.74024e+07 2.98926e+07 330 2.98966e+07 2.3245e+07 0.00335824 2.97325e+07 49.8624 0.00280387 0.988838 0 50.2434 GTEX-1LSNL-2726-SM-E9TKJ 0 B1 6 pieces, squamous epithelium is ~50 microns; moderate adherent dermal fat up to ~1.5mm, rep delineated 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1398 865 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986509 373429 0.975304 0.988229 0.76045 23979 1 76 0.00217664 180 0 8.17341e+07 0.0244654 410549 8.27076e+07 3.70326e+06 24028 4.06559e+07 0 0.214854 0.988229 0.751498 8.17341e+07 0.00280391 1.79465e+07 8.18018e+06 1.80828e+07 183 1.80595e+07 1.37592e+07 0.00248973 1.8103e+07 50.0601 0.00496386 0.98995 0 50.1891 GTEX-1LSNL-2826-SM-E9U5L 1 B1 2 pieces, >99% fibroadipose elements; trace atrophic ducts present, delineated 7.4 Breast Breast - Mammary Tissue 0008367 1403 860 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742,LCSET-10947,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.971454 129499 0.968289 0.973335 0.803686 20731 1 76 0.00217541 113 0 3.94724e+07 0.0314295 370758 4.05538e+07 4.13407e+06 20746 1.96051e+07 0 0.164603 0.973335 0.782256 3.94724e+07 0.00362397 8.60743e+06 3.90013e+06 8.68077e+06 117 8.66812e+06 5.44997e+06 0.00289829 8.68932e+06 50.0611 0.00914238 0.975215 0 50.2121 GTEX-1LSNM-0004-SM-DE1KE B1 Blood Whole Blood 0013756 -129 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LSNM-0004-SM-DJWY7 B1 Blood Whole Blood 0013756 -129 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10394,LCSET-10559 02/03/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LSNM-0005-SM-CXZIW B1 9.1 Blood Whole Blood 0013756 -129 BP-63050 RNA isolation_PAXgene Blood RNA (Manual) 05/01/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.977974 798424 0.972927 0.97924 0.813924 18136 1 76 0.00177899 266 0 1.29625e+08 0.0263871 271869 1.32373e+08 7.94946e+06 18145 6.45714e+07 0 0.159003 0.97924 0.797026 1.29625e+08 0.00279419 2.99119e+07 1.70005e+08 3.04269e+07 285 3.04403e+07 3.47582e+07 0.00228594 3.00715e+07 49.6953 0.00205381 0.980505 0 50.4268 GTEX-1LSNM-0126-SM-EAZ57 0 B1 2 pieces; capsule present on 1 piece (target is 5mm below capsule) 8.1 Spleen Spleen 0002106 192 964 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988862 583483 0.956057 0.989725 0.769052 24281 1 76 0.00222449 159 0 7.84693e+07 0.0433162 514875 7.92839e+07 6.62957e+06 24307 3.90642e+07 0 0.187004 0.989725 0.761151 7.84693e+07 0.0031148 1.70769e+07 1.83608e+07 1.7223e+07 178 1.72055e+07 1.26728e+07 0.00266926 1.71658e+07 49.9422 0.00649407 0.990589 0 50.2129 GTEX-1LSNM-0426-SM-E9TIZ 1 B1 2 pieces; includes 10-20% fat 8.6 Heart Heart - Atrial Appendage 0006631 219 937 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.991102 680553 0.981511 0.992489 0.848153 22305 1 76 0.0017191 374 0 1.28843e+08 0.0181963 2.66578e+06 1.29819e+08 6.67008e+06 22327 6.4172e+07 0 0.133358 0.992489 0.841782 1.28843e+08 0.00222598 2.74522e+07 2.85604e+07 2.77429e+07 366 2.76828e+07 2.16521e+07 0.00197219 2.76532e+07 49.9732 0.0205347 0.993876 0 50.2634 GTEX-1LSNM-0526-SM-DIPG6 1 B1 2 pieces; 1 piece includes areas of acute extension of an older infarct, with hypereosinophilia and early coagulative necrosis surrounding patchy regions of scar 8.3 Heart Heart - Left Ventricle 0006566 222 934 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.994137 342128 0.985607 0.995119 0.872902 21093 1 76 0.00173967 271 0 1.1889e+08 0.014149 2.65441e+06 1.19473e+08 7.63573e+06 21104 5.92956e+07 0 0.112705 0.995119 0.868642 1.1889e+08 0.00274431 2.5917e+07 2.11932e+07 2.60251e+07 317 2.60298e+07 2.03699e+07 0.0022415 2.60066e+07 49.9777 0.0222176 0.996102 0 50.104 GTEX-1LSNM-0626-SM-DIPG7 0 B1 2 pieces; lobulated mature fat 8.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 224 932 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99398 406401 0.978379 0.995093 0.841146 23364 1 76 0.00196347 380 0 1.07495e+08 0.0213236 1.03986e+06 1.08025e+08 7.86785e+06 23390 5.3593e+07 0 0.137233 0.995093 0.837019 1.07495e+08 0.00278352 2.36334e+07 1.06181e+07 2.39103e+07 340 2.3871e+07 1.97475e+07 0.00237303 2.37849e+07 49.9096 0.00962611 0.996207 0 50.2912 GTEX-1LSNM-0726-SM-DHXL1 1 B1 2 pieces; small attachment of fat/nerve/vessels on 1 piece 7.7 Pancreas Pancreas 0001150 228 928 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993716 414170 0.98146 0.994649 0.865576 21906 1 76 0.00239437 157 0 1.07959e+08 0.0182338 183582 1.0854e+08 5.51529e+06 21931 5.37995e+07 0 0.115884 0.994649 0.860945 1.07959e+08 0.00279095 2.51077e+07 2.88692e+07 2.54073e+07 180 2.54051e+07 3.40444e+07 0.00259247 2.52134e+07 49.8106 0.00169138 0.995583 0 50.2965 GTEX-1LSNM-0826-SM-DIPG8 1 B1 6 pieces; well trimmed 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 230 926 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992313 420368 0.969445 0.993632 0.785103 24393 1 76 0.00210842 378 0 9.82281e+07 0.0304103 1.41139e+06 9.88576e+07 7.50984e+06 24430 4.89459e+07 0 0.184342 0.993632 0.780103 9.82281e+07 0.00332999 2.15653e+07 1.37023e+07 2.18865e+07 350 2.17459e+07 1.25005e+07 0.0027184 2.18235e+07 50.089 0.014277 0.994951 0 50.3696 GTEX-1LSNM-1026-SM-DHXL2 1 B1 6 pieces; full thickness sections 6.2 Stomach Stomach 0000945 236 920 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991697 259232 0.981758 0.992626 0.857092 23160 1 76 0.00195482 426 0 1.07375e+08 0.0179819 1.72382e+06 1.08173e+08 6.01546e+06 23184 5.35265e+07 0 0.124666 0.992626 0.850772 1.07375e+08 0.00239779 2.42576e+07 6.15825e+07 2.47236e+07 373 2.46596e+07 1.97756e+07 0.00217609 2.44043e+07 49.7398 0.0159358 0.993555 0 50.4757 GTEX-1LSNM-1126-SM-DIPG9 1 B1 6 pieces 8.7 Esophagus Esophagus - Mucosa 0006920 245 911 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 EXCLUDE 0.993801 423802 0.978332 0.994927 0.841362 22322 1 76 0.00200014 288 0 1.04047e+08 0.0213234 721526 1.04578e+08 8.40471e+06 22346 5.18617e+07 0 0.136969 0.994927 0.837094 1.04047e+08 0.00285528 2.25602e+07 8.81944e+06 2.27218e+07 305 2.27616e+07 1.93401e+07 0.00242722 2.26284e+07 49.8534 0.00689943 0.996054 0 50.1784 GTEX-1LSNM-1326-SM-E9TJ1 0 B1 2 pieces; 70 and 90% fat with stroma and rare duct 7.3 Breast Breast - Mammary Tissue 0008367 252 904 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987291 333589 0.968496 0.988987 0.772338 24505 1 76 0.00193354 172 0 8.24562e+07 0.0312377 414471 8.33744e+07 3.47636e+06 24539 4.10504e+07 0 0.196158 0.988987 0.763832 8.24562e+07 0.00243747 1.8104e+07 7.10023e+06 1.81877e+07 198 1.81918e+07 1.37576e+07 0.00218507 1.82282e+07 50.05 0.0049712 0.990683 0 50.1153 GTEX-1LSNM-1426-SM-E6CIH 1 B1 6 pieces; target muscularis 7.6 Colon Colon - Sigmoid 0001159 254 902 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992461 503496 0.978489 0.99416 0.84377 23057 1 76 0.00174513 388 0 1.09273e+08 0.0211434 454173 1.09915e+08 7.13293e+06 23079 5.44016e+07 0 0.134719 0.99416 0.838842 1.09273e+08 0.00241734 2.39017e+07 9.10377e+06 2.4173e+07 341 2.40672e+07 2.08577e+07 0.00208066 2.41731e+07 50.1097 0.00413204 0.995858 0 50.2823 GTEX-1LSNM-1926-SM-E6CII 1 B1 6 pieces; includes from 5-15% fat; epidermis measures ~35-40 microns 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 371 785 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993028 347169 0.974518 0.994417 0.799864 23637 1 76 0.00183879 315 0 1.03326e+08 0.0252141 495587 1.03906e+08 6.38624e+06 23673 5.14660e+07 0 0.174654 0.994417 0.795398 1.03326e+08 0.002484 2.24975e+07 9.52155e+06 2.25969e+07 317 2.25805e+07 1.87898e+07 0.00216094 2.26383e+07 50.0639 0.00476958 0.995805 0 50.1101 GTEX-1LSNM-2026-SM-E6CIJ 1 B1 2 pieces; mature fat 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 373 783 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992854 349294 0.976994 0.994403 0.812827 23444 1 76 0.00184537 217 0 8.72703e+07 0.0226556 455285 8.77615e+07 5.79047e+06 23471 4.34539e+07 0 0.164168 0.994403 0.808278 8.72703e+07 0.00243418 1.92091e+07 6.96975e+06 1.93082e+07 230 1.93027e+07 1.65547e+07 0.00213932 1.93364e+07 50.0436 0.00518775 0.995953 0 50.1286 GTEX-1LSNM-2126-SM-E6CIK 1 B1 2 pieces; well trimmed, intimal thickening/mild plaque, focus of medial calcification 7.8 Blood Vessel Artery - Tibial 0007610 375 781 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993144 556155 0.976855 0.994418 0.834348 21749 1 76 0.00180084 289 0 1.02224e+08 0.0226002 234609 1.02798e+08 6.26095e+06 21777 5.0881e+07 0 0.142506 0.994418 0.829691 1.02224e+08 0.00258093 2.219e+07 6.20729e+06 2.23236e+07 329 2.22667e+07 2.02797e+07 0.00219039 2.23678e+07 50.1132 0.00228224 0.995693 0 50.15 GTEX-1LSNM-2326-SM-EWRO8 0 B1 2 pieces; skeletal muscle with from 5-15% fat/vessels/nerve 8.2 Muscle Muscle - Skeletal 0011907 380 776 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989142 346677 0.983018 0.992199 0.87521 21319 1 76 0.00208319 285 0 1.11946e+08 0.0167641 1.68898e+06 1.12827e+08 8.13187e+06 21330 5.57158e+07 0 0.107807 0.992199 0.868383 1.11946e+08 0.00263723 2.45276e+07 1.70087e+07 2.47018e+07 319 2.48262e+07 2.14052e+07 0.00235288 2.46725e+07 49.8447 0.0149697 0.995256 0 50.1769 GTEX-1LSNM-5016-SM-AN498 B1 Muscle Muscle - Skeletal 0011907 380 ChIP-Seq GTEX-1LSVX-0003-SM-DE1K4 B1 Blood Whole Blood 0013756 513 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LSVX-0003-SM-DJWYB B1 Blood Whole Blood 0013756 513 BP-63048 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LSVX-0005-SM-DKPPI B1 8.1 Blood Whole Blood 0013756 514 BP-63050 RNA isolation_PAXgene Blood RNA (Manual) 05/01/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.963447 505183 0.985393 0.965665 0.809373 18548 1 76 0.00255502 266 0 1.39395e+08 0.0131449 394998 1.44352e+08 1.52034e+07 18557 6.92701e+07 0 0.17602 0.965665 0.781583 1.39395e+08 0.00333419 3.29322e+07 2.21343e+08 3.31647e+07 295 3.32583e+07 3.74544e+07 0.00294371 3.31602e+07 49.9261 0.00273636 0.967883 0 50.1759 GTEX-1LSVX-0011-R11b-SM-EXOIA B1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 560 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989842 425082 0.961708 0.991924 0.774811 23124 1 76 0.0020748 200 0 8.33481e+07 0.0377908 1.5778e+06 8.40267e+07 4.77593e+06 23152 4.14594e+07 0 0.186897 0.991924 0.768554 8.33481e+07 0.00326439 1.82904e+07 9.50194e+06 1.83885e+07 253 1.84417e+07 1.13727e+07 0.00266835 1.83922e+07 49.9327 0.0187773 0.994005 0 50.1337 GTEX-1LSVX-0011-R4b-SM-EXURP B1, A1 6.4 Brain Brain - Amygdala 0001876 560 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.990863 718167 0.966637 0.991954 0.855457 23169 1 76 0.00159604 264 0 7.40086e+07 0.0330301 4.61244e+06 7.46088e+07 1.96335e+06 23183 3.68456e+07 0 0.111179 0.991954 0.848575 7.40086e+07 0.00216089 1.62652e+07 1.22651e+07 1.66066e+07 257 1.65225e+07 8.98611e+06 0.00187815 1.64198e+07 49.8441 0.0618216 0.993046 0 50.5192 GTEX-1LSVX-0126-SM-EVYCY 2 B1 2 pieces; multiple 'empty' defects ; 10% fibrous content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 700 579 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991622 348189 0.974659 0.992289 0.783421 23331 1 76 0.00193401 172 0 7.95044e+07 0.0250268 354519 8.01222e+07 3.64951e+06 23361 3.96197e+07 0 0.191238 0.992289 0.77738 7.95044e+07 0.00299234 1.75047e+07 6.59228e+06 1.76916e+07 185 1.76498e+07 1.41585e+07 0.00246282 1.75993e+07 49.9285 0.00442473 0.992956 0 50.2655 GTEX-1LSVX-0626-SM-E9U59 2 B1 2 pieces; moderately congested; numerous alveolar macrophages 5.6 Lung Lung 0008952 732 547 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.979391 212271 0.968734 0.980234 0.763127 23762 1 76 0.00200725 155 0 7.1671e+07 0.0310249 604950 7.31162e+07 3.12676e+06 23782 3.56976e+07 0 0.205607 0.980234 0.748043 7.1671e+07 0.00292107 1.57625e+07 7.2615e+06 1.58672e+07 172 1.58065e+07 1.05697e+07 0.00246377 1.58874e+07 50.1277 0.00827381 0.981077 0 50.1655 GTEX-1LSVX-0726-SM-E9TJG 2 B1 2 pieces; 2 adenomatoid nodules <2mm 6.3 Thyroid Thyroid 0002046 735 544 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.982608 438042 0.972639 0.984341 0.736626 23893 1 76 0.00221874 152 0 7.5739e+07 0.0270219 365885 7.69439e+07 3.35554e+06 23929 3.76516e+07 0 0.236014 0.984341 0.72509 7.5739e+07 0.0029168 1.67563e+07 7.17997e+06 1.68762e+07 168 1.69022e+07 1.15683e+07 0.00256716 1.68534e+07 49.9277 0.00475522 0.986073 0 50.1781 GTEX-1LSVX-1026-SM-EWRO9 2 B1 6 pieces; up to 40% fat content 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 758 521 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.981952 223863 0.969072 0.984785 0.794176 23347 1 76 0.00239572 204 0 8.34582e+07 0.0307329 1.66316e+06 8.47476e+07 5.80938e+06 23372 4.14977e+07 0 0.174896 0.984785 0.782093 8.34582e+07 0.00329907 1.81284e+07 7.77482e+06 1.83176e+07 245 1.82905e+07 1.12522e+07 0.00283554 1.8365e+07 50.1016 0.0196248 0.987619 0 50.2596 GTEX-1LSVX-1226-SM-DHXJN 1 B1 6 pieces; focal sloughing of epithelium; prominent muscularis mucosae 6.8 Esophagus Esophagus - Mucosa 0006920 762 517 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.99391 278075 0.974192 0.994788 0.800818 23057 1 76 0.0022448 207 0 8.61287e+07 0.0256146 501622 8.658e+07 4.66012e+06 23087 4.29398e+07 0 0.173374 0.994788 0.796644 8.61287e+07 0.00262504 1.92615e+07 9.89681e+06 1.9576e+07 226 1.95491e+07 1.46682e+07 0.00243476 1.93628e+07 49.7606 0.00579374 0.995666 0 50.4049 GTEX-1LSVX-1326-SM-DIPET 2 B1 2 pieces; <5% fibrous content 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 763 516 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992139 477841 0.976747 0.993368 0.768955 23935 1 76 0.00235038 201 0 9.1192e+07 0.0229208 331842 9.18008e+07 6.96875e+06 23978 4.54179e+07 0 0.207791 0.993368 0.763856 9.1192e+07 0.00331677 2.02332e+07 1.09206e+07 2.02875e+07 210 2.03319e+07 1.62846e+07 0.00283298 2.03031e+07 49.9646 0.0036148 0.994598 0 50.0671 GTEX-1LSVX-1426-SM-DHXJO 2 B1 2 pieces; moderate vascular congestion in red pulp; well defined lymphoid tissue (white pulp) 5.8 Spleen Spleen 0002106 771 508 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991391 326732 0.963664 0.99231 0.703942 23592 1 76 0.0027966 141 0 7.83956e+07 0.0359865 596210 7.90031e+07 4.77393e+06 23636 3.90358e+07 0 0.259722 0.99231 0.698529 7.83956e+07 0.00302034 1.71472e+07 1.13281e+07 1.73533e+07 160 1.73325e+07 1.139e+07 0.00290836 1.72455e+07 49.8742 0.00754666 0.993229 0 50.2987 GTEX-1LSVX-1726-SM-DHXJP 2 B1 6 pieces; mucosa totally autolyzed, but muscularis intact and could be used to compare with sigmoid [LCM] 6 Colon Colon - Transverse 0001157 783 496 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.988636 253631 0.97077 0.989455 0.802404 25233 1 76 0.00323488 280 0 9.63038e+07 0.0265642 580664 9.73301e+07 7.70449e+06 25258 4.78564e+07 0 0.168366 0.989455 0.793943 9.63038e+07 0.00367557 2.11552e+07 1.19581e+07 2.14368e+07 273 2.14132e+07 1.61378e+07 0.00345504 2.12533e+07 49.8125 0.00596592 0.990275 0 50.3306 GTEX-1LSVX-2026-SM-E9TJD 2 B1 6 pieces; 3 pieces have autolyzed mucosal remnants [labeled] 6.1 Colon Colon - Sigmoid 0001159 794 485 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983094 187521 0.971183 0.984589 0.800956 22405 1 76 0.00203908 132 0 6.17758e+07 0.028566 524297 6.27427e+07 2.75342e+06 22426 3.07426e+07 0 0.170227 0.984589 0.788612 6.17758e+07 0.00261773 1.33013e+07 4.60206e+06 1.34376e+07 148 1.33899e+07 1.0159e+07 0.00232796 1.34392e+07 50.0918 0.0083563 0.986084 0 50.2548 GTEX-1LSVX-2126-SM-EV7A9 1 B1 2 pieces; slight reduction in mature spermatogenesis 6.3 Testis Testis 0000473 797 482 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989651 533460 0.933488 0.990796 0.725797 34593 1 76 0.00244458 287 0 1.32663e+08 0.0662074 1.80247e+06 1.33895e+08 1.54343e+07 34678 6.60932e+07 0 0.207691 0.990796 0.719117 1.32663e+08 0.00363593 2.80043e+07 1.89798e+07 2.82094e+07 317 2.82418e+07 2.02953e+07 0.00303957 2.81082e+07 49.8814 0.0134618 0.99194 0 50.1825 GTEX-1LSVX-2426-SM-E6CJX 1 B1 2 pieces; fibrofatty tissue without mammary ducts 6.1 Breast Breast - Mammary Tissue 0008367 803 476 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993073 238413 0.981205 0.99436 0.805777 24485 1 76 0.00190456 279 0 1.0485e+08 0.0184253 656945 1.05444e+08 6.75148e+06 24527 5.22145e+07 0 0.175428 0.99436 0.801232 1.0485e+08 0.00252077 2.33301e+07 9.25163e+06 2.35135e+07 315 2.34161e+07 1.76836e+07 0.00221226 2.35421e+07 50.1342 0.00623025 0.995646 0 50.1958 GTEX-1LSVX-2526-SM-DIPEU 1 B1 6 pieces; well trimmed; <10% dermal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 806 473 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311,LCSET-10533 01/26/2017 TruSeq.v1 RNASEQ 0.991904 769089 0.974762 0.993458 0.775183 26145 1 76 0.00215726 390 0 1.58623e+08 0.0249635 868112 1.59668e+08 7.48199e+06 26224 7.89285e+07 0 0.199579 0.993458 0.770112 1.58623e+08 0.0026123 3.49979e+07 1.91382e+07 3.50504e+07 407 3.52044e+07 2.83215e+07 0.00238443 3.50816e+07 49.9126 0.00543699 0.995012 0 50.0375 GTEX-1LSVX-2626-SM-DHXJQ 1 B1 1 piece; mostly anterior lobe; posterior labeled 6.2 Pituitary Pituitary 0000007 861 418 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993835 492415 0.966975 0.994741 0.777315 25574 1 76 0.00228429 270 0 1.00555e+08 0.032825 3.20818e+06 1.01087e+08 6.01262e+06 25621 5.0114e+07 0 0.18966 0.994741 0.773227 1.00555e+08 0.00250037 2.18214e+07 1.37678e+07 2.22882e+07 320 2.22148e+07 1.25302e+07 0.00239223 2.19792e+07 49.7335 0.0317369 0.995648 0 50.5291 GTEX-1LSVX-2826-SM-EVR58 1 B1 2 pieces 5.8 Brain Brain - Cerebellum 0002037 870 409 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.991673 473463 0.956791 0.992559 0.731298 25724 1 76 0.00236998 278 0 1.56485e+08 0.0428287 2.59472e+06 1.57658e+08 9.67597e+06 25787 7.7966e+07 0 0.225493 0.992559 0.725857 1.56485e+08 0.00261096 3.43202e+07 2.45947e+07 3.45177e+07 318 3.44825e+07 2.00931e+07 0.00249037 3.44783e+07 49.9969 0.0164578 0.993446 0 50.1434 GTEX-1LVA9-0004-SM-DE1KL B1 Blood Whole Blood 0013756 1131 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LVA9-0004-SM-DJWYS B1 Blood Whole Blood 0013756 1131 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LVA9-0006-SM-DKPPN B1 6.8 Blood Whole Blood 0013756 1131 BP-63078 RNA isolation_PAXgene Blood RNA (Manual) 05/04/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.971802 262970 0.986751 0.974124 0.812889 17750 1 76 0.00255774 126 0 1.01183e+08 0.0120649 358183 1.03871e+08 1.06349e+07 17757 5.03027e+07 0 0.173863 0.974124 0.791854 1.01183e+08 0.00350993 2.39583e+07 1.50473e+08 2.41629e+07 156 2.42426e+07 2.76006e+07 0.0030327 2.4121e+07 49.8743 0.00344835 0.976445 0 50.2126 GTEX-1LVA9-0011-R2a-SM-EZ6MJ B1, A1 6.2 Brain Brain - Substantia nigra 0002038 1142 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.981467 175842 0.969835 0.983076 0.870497 21360 1 76 0.00242769 388 0 9.06699e+07 0.0299567 1.08515e+07 9.22308e+07 6.89924e+06 21374 4.5185e+07 0 0.0993379 0.983076 0.855765 9.06699e+07 0.00344886 1.99728e+07 1.27579e+07 2.06796e+07 334 2.03339e+07 9.59828e+06 0.00293744 2.04281e+07 50.1155 0.117656 0.984685 0 50.8693 GTEX-1LVA9-0011-R6a-SM-EYYWH B1, A1 5.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1142 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984086 194777 0.967514 0.987372 0.870069 21726 1 76 0.00208615 268 0 7.30545e+07 0.0322559 6.75976e+06 7.39888e+07 2.71773e+06 21737 3.63326e+07 0 0.0974442 0.987372 0.859082 7.30545e+07 0.0032819 1.59045e+07 1.42864e+07 1.62424e+07 287 1.608e+07 6.22402e+06 0.00268204 1.62432e+07 50.2525 0.0913619 0.990658 0 50.5255 GTEX-1LVA9-0011-R7a-SM-EYYWG B1, A1 5.7 Brain Brain - Putamen (basal ganglia) 0001874 1142 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986603 248023 0.973657 0.989352 0.869473 19284 1 76 0.00194872 265 0 7.16187e+07 0.0262127 9.1331e+06 7.23895e+07 2.51449e+06 19290 3.56404e+07 0 0.104184 0.989352 0.860215 7.16187e+07 0.00320949 1.55607e+07 2.35527e+07 1.60187e+07 315 1.57181e+07 4.46214e+06 0.00257736 1.59858e+07 50.4222 0.126166 0.992101 0 50.7252 GTEX-1LVA9-0011-R9a-SM-EYYWF B1, A1 6.5 Brain Brain - Spinal cord (cervical c-1) 0006469 1142 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.974135 209529 0.965362 0.978383 0.870666 21757 1 76 0.00230085 208 0 6.35932e+07 0.0343456 5.05417e+06 6.49982e+07 2.8212e+06 21768 3.15625e+07 0 0.0946959 0.978383 0.851845 6.35932e+07 0.00374137 1.39652e+07 9.57866e+06 1.44009e+07 212 1.42621e+07 6.79566e+06 0.00301798 1.43297e+07 50.1182 0.0777586 0.982632 0 50.7681 GTEX-1LVA9-0226-SM-E9U5N 1 B1 2 pieces; mature fat, <10% fibrous tissue and nerve 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1211 895 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986873 138876 0.976416 0.987728 0.787043 21535 1 76 0.00184317 124 0 5.26606e+07 0.0232738 248479 5.33149e+07 2.44192e+06 21554 2.62374e+07 0 0.189373 0.987728 0.777384 5.26606e+07 0.00282014 1.16205e+07 4.29298e+06 1.17056e+07 130 1.16781e+07 8.83399e+06 0.00233123 1.16929e+07 50.0316 0.0046606 0.988582 0 50.1823 GTEX-1LVA9-0326-SM-DLHBU 0 B1 2 pieces; skeletal muscle with minimal internal fat 9.1 Muscle Muscle - Skeletal 0011907 1212 894 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.990914 671754 0.983518 0.993626 0.87022 20449 1 76 0.00219741 269 0 1.06324e+08 0.0162435 1.78806e+06 1.07006e+08 9.1629e+06 20463 5.28879e+07 0 0.113298 0.993626 0.864673 1.06324e+08 0.00239799 2.32577e+07 1.03414e+07 2.34835e+07 309 2.36352e+07 2.22428e+07 0.00229743 2.33559e+07 49.7029 0.01671 0.996338 0 50.2415 GTEX-1LVA9-0526-SM-E9U6W 1 B1 2 pieces; mild atherosclerosis with focal calcification 6.6 Blood Vessel Artery - Tibial 0007610 1213 893 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.983762 118886 0.972045 0.98453 0.833914 19953 1 76 0.00171089 125 0 5.22885e+07 0.0276365 431799 5.31102e+07 2.37593e+06 19963 2.60528e+07 0 0.138132 0.98453 0.821013 5.22885e+07 0.0025628 1.11567e+07 4.57896e+06 1.12719e+07 133 1.11989e+07 9.39232e+06 0.00213651 1.12713e+07 50.1611 0.00813025 0.985298 0 50.2568 GTEX-1LVA9-0926-SM-EVR5G 1 B1 2 pieces; patchy areas of scar, some fragmentation of fibers, small component of perivascular fat 5.7 Heart Heart - Left Ventricle 0006566 1278 828 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.985535 103831 0.989779 0.988075 0.875673 18841 1 76 0.00191754 365 0 8.03209e+07 0.0101677 9.83657e+06 8.12903e+07 6.39392e+06 18844 3.9974e+07 0 0.114106 0.988075 0.865231 8.03209e+07 0.00359713 1.78852e+07 2.6688e+07 1.83829e+07 366 1.8221e+07 3.49257e+06 0.00275517 1.82062e+07 49.9797 0.121006 0.990614 0 50.6862 GTEX-1LVA9-2126-SM-DLHBY 2 B1 5 pieces; squamous mucosa is largely sloughed 6.8 Esophagus Esophagus - Mucosa 0006920 1374 732 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.987122 245848 0.974925 0.989873 0.841909 23197 1 76 0.00256001 371 0 1.04866e+08 0.024914 3.03739e+06 1.05939e+08 9.9116e+06 23221 5.21378e+07 0 0.133016 0.989873 0.833383 1.04866e+08 0.00287067 2.31961e+07 1.48267e+07 2.40649e+07 381 2.40121e+07 1.01526e+07 0.00271491 2.35123e+07 49.4742 0.0286711 0.992624 0 50.9191 GTEX-1LVA9-2426-SM-EWROM 2 B1 6 pieces; target muscularis 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1377 729 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.975186 240850 0.973294 0.978731 0.838351 22184 1 76 0.00239476 267 0 8.10578e+07 0.0265238 4.0366e+06 8.28193e+07 5.99441e+06 22205 4.02731e+07 0 0.134943 0.978731 0.82052 8.10578e+07 0.00350611 1.7933e+07 1.10573e+07 1.81736e+07 307 1.81374e+07 8.36925e+06 0.00293543 1.82214e+07 50.1155 0.0487399 0.982275 0 50.3331 GTEX-1LVA9-2526-SM-EVR5H 1 B1 2 pieces; 1 piece is portion of lip, 2nd is salivary gland elements with attachment of fat (~20%) 7.8 Salivary Gland Minor Salivary Gland 0006330 1382 724 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987788 261344 0.976821 0.990016 0.804719 23740 1 76 0.00228226 243 0 8.45471e+07 0.0225031 288420 8.53998e+07 6.62384e+06 23770 4.20486e+07 0 0.172102 0.990016 0.796684 8.45471e+07 0.00384658 1.90614e+07 1.33315e+07 1.93571e+07 222 1.93424e+07 1.4802e+07 0.00306266 1.92548e+07 49.8866 0.00337729 0.992243 0 50.3848 GTEX-1LVA9-2626-SM-EVYD4 1 B1 6 pieces; mostly well trimmed, but few include ~10% fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1394 712 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988384 250251 0.975473 0.988979 0.788089 23000 1 76 0.00200152 152 0 7.1124e+07 0.0242815 351238 7.19166e+07 3.37209e+06 23034 3.54309e+07 0 0.187385 0.988979 0.779403 7.1124e+07 0.00313136 1.56826e+07 7.46437e+06 1.58364e+07 165 1.5777e+07 1.27172e+07 0.0025661 1.57892e+07 50.0194 0.00488397 0.989574 0 50.2441 GTEX-1LVA9-2826-SM-EAZ5D 2 B1 2 pieces; spermatogenesis is present 6.1 Testis Testis 0000473 1396 710 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.98927 496948 0.912536 0.990007 0.709355 34134 1 76 0.00204398 288 0 1.04736e+08 0.0871271 1.2767e+06 1.05793e+08 9.14296e+06 34210 5.21861e+07 0 0.203181 0.990007 0.702267 1.04736e+08 0.00283322 2.13493e+07 1.55406e+07 2.14953e+07 264 2.14579e+07 1.5379e+07 0.00243831 2.14551e+07 49.9966 0.0120679 0.990744 0 50.1703 GTEX-1LVA9-3026-SM-E9U5M 1 B1 4 pieces; small focus of pigmented macrophages with surrounding edema, consistent with old infarct 5.9 Brain Brain - Cortex 0001870 1436 670 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 EXCLUDE 0.972333 114042 0.964073 0.973268 0.854715 20315 1 76 0.00188778 182 0 5.82672e+07 0.0357242 4.91049e+06 5.98675e+07 2.91425e+06 20325 2.90348e+07 0 0.109358 0.973268 0.831867 5.82672e+07 0.00278019 1.28435e+07 6.69551e+06 1.32641e+07 183 1.30024e+07 6.5693e+06 0.00233355 1.31496e+07 50.2813 0.0820227 0.974204 0 50.8055 GTEX-1LVAM-0004-SM-DE1IQ B1 Blood Whole Blood 0013756 -67 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LVAM-0004-SM-DJWWR B1 Blood Whole Blood 0013756 -67 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LVAM-0005-SM-CXZJ4 B1 7.6 Blood Whole Blood 0013756 -67 BP-63078 RNA isolation_PAXgene Blood RNA (Manual) 05/04/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990325 658902 0.968671 0.991464 0.815517 18813 1 76 0.0022163 156 0 1.05507e+08 0.0304617 486878 1.06415e+08 6.95279e+06 18822 5.25523e+07 0 0.153154 0.991464 0.808556 1.05507e+08 0.00297576 2.3931e+07 1.05625e+08 2.4355e+07 195 2.43295e+07 2.53461e+07 0.0025956 2.40929e+07 49.7557 0.00457527 0.992603 0 50.4391 GTEX-1LVAM-0326-SM-DIPFL 0 C1 2 pieces, ~5% interstitial fat/vascular elements, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 380 470 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993735 532813 0.98425 0.994869 0.881881 19777 1 76 0.00187807 275 0 9.97615e+07 0.0155337 1.42407e+06 1.00276e+08 7.15394e+06 19786 4.97271e+07 0 0.102369 0.994869 0.877356 9.97615e+07 0.00276639 2.19249e+07 1.34151e+07 2.21182e+07 313 2.21542e+07 2.01369e+07 0.00232173 2.1984e+07 49.8073 0.0142015 0.996004 0 50.2195 GTEX-1LVAM-0426-SM-DIPFM 0 C1 2 pieces, no adherent fat 8.1 Nerve Nerve - Tibial 0001323 383 467 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993596 503758 0.969672 0.994658 0.76829 24986 1 76 0.00220161 291 0 1.04586e+08 0.0300026 341636 1.05148e+08 7.86067e+06 25035 5.21205e+07 0 0.201382 0.994658 0.764186 1.04586e+08 0.00313552 2.30787e+07 8.64553e+06 2.31992e+07 302 2.32258e+07 1.80425e+07 0.00266806 2.31566e+07 49.9254 0.00324911 0.99572 0 50.1302 GTEX-1LVAM-0726-SM-E6CIL 0 C1 6 pieces, no dermal fat; squamous epithelium is ~35 microns 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 387 463 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992986 360263 0.9752 0.994336 0.823491 23582 1 76 0.00181807 297 0 9.61169e+07 0.0245689 524728 9.66645e+07 6.3157e+06 23611 4.7878e+07 0 0.15171 0.994336 0.818826 9.61169e+07 0.00239585 2.09556e+07 9.59378e+06 2.11233e+07 305 2.10327e+07 1.79101e+07 0.00210657 2.11588e+07 50.1494 0.00542834 0.995685 0 50.1993 GTEX-1LVAM-0826-SM-EV79X 1 C1 2 pieces, mild nodular goitrous features. ~20% adherent fibrous tissue, rep delineated 7 Thyroid Thyroid 0002046 395 455 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990061 220231 0.966222 0.991152 0.755194 25433 1 76 0.00240985 274 0 1.06542e+08 0.0334895 432311 1.07493e+08 1.20658e+07 25479 5.30978e+07 0 0.211028 0.991152 0.748513 1.06542e+08 0.00373165 2.32925e+07 9.37908e+06 2.34753e+07 300 2.34337e+07 1.70623e+07 0.00307002 2.34397e+07 50.0064 0.00402177 0.992244 0 50.1955 GTEX-1LVAM-0926-SM-E9TJ2 0 C1 2 pieces, fibrocystic changes; lobular/ductal elements present, rep delineated 7.7 Breast Breast - Mammary Tissue 0008367 407 443 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986183 187788 0.968802 0.987856 0.779846 23139 1 76 0.00207038 120 0 4.92334e+07 0.03054 187637 4.98386e+07 2.18485e+06 23161 2.44982e+07 0 0.188956 0.987856 0.770375 4.92334e+07 0.00256209 1.08259e+07 4.29937e+06 1.08723e+07 117 1.08664e+07 8.97533e+06 0.00231582 1.09097e+07 50.0996 0.00376489 0.98953 0 50.1068 GTEX-1LVAM-1026-SM-DIPFK 1 C1 2 pieces, ~10% fascia/vascular elements, rep delineated 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 399 451 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992757 359042 0.980708 0.994099 0.848559 22527 1 76 0.00208219 372 0 1.06096e+08 0.0190965 2.69119e+06 1.06726e+08 7.88502e+06 22547 5.28782e+07 0 0.132149 0.994099 0.843551 1.06096e+08 0.00315284 2.33157e+07 1.74443e+07 2.38517e+07 363 2.36622e+07 1.25944e+07 0.00261679 2.36172e+07 49.9525 0.0252159 0.995441 0 50.5682 GTEX-1LVAM-1126-SM-DHXKP 1 C1 6 pieces, squamous mucosa up to ~0.5mm, ~20-30% thickness 9.5 Esophagus Esophagus - Mucosa 0006920 429 421 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992793 446736 0.978992 0.993507 0.84935 23191 1 76 0.00226567 281 0 1.15049e+08 0.0206857 514519 1.15801e+08 6.18574e+06 23214 5.73619e+07 0 0.129642 0.993507 0.843835 1.15049e+08 0.00250634 2.59616e+07 1.8091e+07 2.62471e+07 309 2.62588e+07 2.53591e+07 0.00238592 2.60265e+07 49.7779 0.00444314 0.994221 0 50.2734 GTEX-1LVAM-1426-SM-E9TJ4 1 C1 6 pieces, well-preserved target mucosa up to ~1mm, ~20% thickness 7.8 Stomach Stomach 0000945 412 438 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986797 414799 0.976313 0.988849 0.82367 22821 1 76 0.00191965 207 0 8.52355e+07 0.0233679 559245 8.61967e+07 3.71613e+06 22847 4.24183e+07 0 0.152643 0.988849 0.814486 8.52355e+07 0.00257297 1.86122e+07 6.43798e+06 1.87352e+07 213 1.8744e+07 1.57684e+07 0.00224563 1.87649e+07 50.0278 0.00648801 0.990901 0 50.1647 GTEX-1LVAM-1626-SM-EV79Y 1 C1 6 pieces, target mucosa up to ~0.4mm, ~15% thickness 6.8 Colon Colon - Transverse 0001157 456 394 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.99023 286149 0.97379 0.991268 0.811577 25247 1 76 0.00259506 284 0 1.23033e+08 0.0250089 2.48191e+06 1.24117e+08 1.31548e+07 25289 6.1263e+07 0 0.162213 0.991268 0.804491 1.23033e+08 0.00370359 2.73317e+07 1.73665e+07 2.75609e+07 325 2.74665e+07 1.71347e+07 0.00314874 2.75268e+07 50.0548 0.0199966 0.992307 0 50.2088 GTEX-1LVAM-1726-SM-DHXKQ 1 C1 6 pieces, trace adherent serosa or 'contaminant' autolyzed mucosa, rep delineated 8.7 Colon Colon - Sigmoid 0001159 465 385 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994345 446015 0.978684 0.995128 0.854964 23644 1 76 0.00208478 283 0 1.13328e+08 0.020966 780820 1.13883e+08 6.27486e+06 23663 5.64994e+07 0 0.123719 0.995128 0.850799 1.13328e+08 0.00235306 2.46932e+07 9.40941e+06 2.50342e+07 315 2.49874e+07 2.20237e+07 0.00221882 2.48186e+07 49.8305 0.00685632 0.99591 0 50.3429 GTEX-1LVAM-1826-SM-DHXKR 1 C1 2 pieces, post menopausal atrophy, normal stroma 8.7 Ovary Ovary 0000992 461 389 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.993752 421625 0.971456 0.99459 0.789253 24456 1 76 0.00213107 285 0 1.05582e+08 0.0282057 206286 1.06156e+08 5.70515e+06 24501 5.26207e+07 0 0.182204 0.99459 0.784983 1.05582e+08 0.00261746 2.3244e+07 1.07819e+07 2.35068e+07 280 2.35094e+07 2.18829e+07 0.00237406 2.33274e+07 49.8057 0.00194323 0.995428 0 50.281 GTEX-1LVAM-1926-SM-E6CIM 0 C1 6 pieces, squamous mucosa up to ~0.25mm 7.7 Vagina Vagina 0000996 454 396 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992833 325164 0.976698 0.994052 0.791149 24234 1 76 0.00195896 283 0 1.0319e+08 0.0230017 222635 1.03807e+08 6.63315e+06 24273 5.14019e+07 0 0.185548 0.994052 0.786444 1.0319e+08 0.00248171 2.31192e+07 1.11589e+07 2.3264e+07 279 2.32086e+07 2.06015e+07 0.00222002 2.32861e+07 50.0833 0.0021447 0.995271 0 50.1561 GTEX-1LVAN-0004-SM-ANILG B1 Blood Whole Blood 0013756 -60 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-8330 12/21/2015 Standard Exome Sequencing v5 (ICE) WES GTEX-1LVAN-0004-SM-AYROD B1 Blood Whole Blood 0013756 -60 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-8653 03/25/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LVAN-0005-SM-DKPPM B1 8.2 Blood Whole Blood 0013756 -60 BP-63078 RNA isolation_PAXgene Blood RNA (Manual) 05/04/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.972095 536007 0.979921 0.974226 0.831042 17502 1 76 0.00256609 187 0 1.15573e+08 0.0190946 548660 1.18631e+08 1.14561e+07 17505 5.74808e+07 0 0.148879 0.974226 0.809623 1.15573e+08 0.00323426 2.70687e+07 1.66628e+08 2.73118e+07 211 2.73937e+07 3.23675e+07 0.00289945 2.72377e+07 49.8572 0.00462494 0.976357 0 50.2235 GTEX-1LVAN-0126-SM-COH4H 1 C1 2 pieces; <5% fibrous content 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 316 884 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992889 331411 0.977553 0.993995 0.819438 22476 1 76 0.00352544 168 0 8.10541e+07 0.0221682 334830 8.15438e+07 8.22005e+06 22503 4.03924e+07 0 0.158115 0.993995 0.814517 8.10541e+07 0.00399902 1.78493e+07 6.81318e+06 1.79678e+07 192 1.79464e+07 1.43406e+07 0.00376197 1.79615e+07 50.0211 0.00410614 0.995101 0 50.1654 GTEX-1LVAN-0226-SM-COH3S 0 C1 6 pieces; 5-10% dermal fat; well trimmed 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 329 871 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992 294591 0.973044 0.993472 0.80512 22789 1 76 0.00359209 231 0 8.75973e+07 0.0267494 572805 8.81729e+07 9.21611e+06 22816 4.36415e+07 0 0.167924 0.993472 0.799864 8.75973e+07 0.00450883 1.91343e+07 8.93873e+06 1.92806e+07 218 1.92544e+07 1.39162e+07 0.00404978 1.92863e+07 50.0414 0.00649638 0.994943 0 50.1905 GTEX-1LVAN-0426-SM-CNPPD 1 C1 2 pieces; no plaques; well trimmed 6.8 Blood Vessel Artery - Tibial 0007610 354 846 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986042 381922 0.973145 0.988772 0.843344 20967 1 76 0.00566139 138 0 6.88006e+07 0.0264742 435315 6.95819e+07 1.72371e+07 20978 3.41987e+07 0 0.129801 0.988772 0.833875 6.88006e+07 0.00798807 1.47298e+07 8.15027e+06 1.48265e+07 145 1.48407e+07 1.28091e+07 0.00682152 1.48935e+07 50.0888 0.00625616 0.991502 0 50.1636 GTEX-1LVAN-0526-SM-CNNQ1 1 C1 2 pieces; 1% fat; well dissected 8.2 Muscle Muscle - Skeletal 0011907 358 842 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.99335 323008 0.983358 0.99522 0.878616 21011 1 76 0.00240086 379 0 1.27567e+08 0.0164595 2.49648e+06 1.2818e+08 1.38079e+07 21025 6.35665e+07 0 0.104742 0.99522 0.874417 1.27567e+08 0.00338424 2.78564e+07 1.48481e+07 2.8352e+07 348 2.83358e+07 2.2156e+07 0.00289163 2.80698e+07 49.7642 0.0194764 0.99709 0 50.4409 GTEX-1LVAN-0626-SM-CNPOQ 0 C1 6 pieces; 5% dermal fat; well trimmed 5.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 376 824 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.983242 285543 0.972437 0.986788 0.801897 23657 1 76 0.00611099 176 0 8.4049e+07 0.0273982 1.24786e+06 8.51744e+07 2.30561e+07 23682 4.1761e+07 0 0.17054 0.986788 0.791302 8.4049e+07 0.00919083 1.835e+07 1.32728e+07 1.87887e+07 187 1.88102e+07 1.07696e+07 0.00764537 1.86013e+07 49.7208 0.0146506 0.990334 0 50.5906 GTEX-1LVAN-0726-SM-CNNPF 1 C1 2 pieces; no lesions 6.8 Thyroid Thyroid 0002046 390 810 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992126 344137 0.963932 0.993993 0.777081 24113 1 76 0.00251209 205 0 8.56869e+07 0.0358009 511795 8.62048e+07 8.91934e+06 24151 4.26735e+07 0 0.186851 0.993993 0.772413 8.56869e+07 0.00349082 1.86028e+07 1.12354e+07 1.89005e+07 219 1.8911e+07 1.28448e+07 0.00300054 1.87392e+07 49.7718 0.00593697 0.995861 0 50.3969 GTEX-1LVAN-0826-SM-CNNPG 1 C1 2 pieces; 70% external fat in 1, 40% fat in other 9.1 Adrenal Gland Adrenal Gland 0002369 400 800 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993309 339667 0.979153 0.994998 0.847533 23635 1 76 0.00248454 275 0 1.2618e+08 0.0204632 2.92202e+06 1.26815e+08 1.33748e+07 23667 6.28656e+07 0 0.13162 0.994998 0.843293 1.2618e+08 0.00328789 2.8056e+07 1.49926e+07 2.81841e+07 325 2.81985e+07 2.0851e+07 0.00288554 2.82204e+07 50.0194 0.0230416 0.996686 0 50.1139 GTEX-1LVAN-0926-SM-CNNQ2 0 C1 4 pieces; 5% fibrous content 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 408 792 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991432 210186 0.977721 0.993909 0.846669 21972 1 76 0.0024932 142 0 6.1017e+07 0.0218896 394255 6.13909e+07 6.80116e+06 21992 3.03678e+07 0 0.131052 0.993909 0.841512 6.1017e+07 0.00417079 1.33999e+07 6.03148e+06 1.35712e+07 156 1.3568e+07 9.85965e+06 0.00332991 1.35436e+07 49.955 0.00642204 0.996385 0 50.3176 GTEX-1LVAN-1026-SM-CNNQZ 1 C1 2 pieces; no congestion 8.4 Spleen Spleen 0002106 409 791 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.987812 373911 0.965196 0.989826 0.778794 25940 1 76 0.00326863 278 0 1.35596e+08 0.0321331 654506 1.36989e+08 1.46182e+07 25986 6.73416e+07 0 0.186402 0.989826 0.770871 1.35596e+08 0.00451724 2.99132e+07 2.18291e+07 3.0148e+07 322 3.02548e+07 2.22296e+07 0.00389167 3.00565e+07 49.8356 0.00477779 0.991841 0 50.1955 GTEX-1LVAN-1126-SM-CNNRE 1 C1 2 pieces; no fibrosis; focal alveolar, bronchial and peribronchial collections of pigmented macrophages 6 Lung Lung 0008952 425 775 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992598 139992 0.96985 0.994166 0.762474 23365 1 76 0.00262505 126 0 6.56147e+07 0.0298389 673332 6.59997e+07 6.55372e+06 23401 3.26925e+07 0 0.207376 0.994166 0.758026 6.56147e+07 0.00323688 1.44488e+07 6.78982e+06 1.45705e+07 151 1.45657e+07 8.92367e+06 0.00293048 1.45427e+07 49.9605 0.010202 0.995733 0 50.2098 GTEX-1LVAN-1226-SM-CNNQY 1 C1 2 pieces; focal periductal fibrosis; 10% external fat content; 5% internal fat 7.1 Pancreas Pancreas 0001150 427 773 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992554 289956 0.977421 0.994428 0.831815 23554 1 76 0.00255194 201 0 1.1792e+08 0.022263 314090 1.18581e+08 1.31711e+07 23591 5.8741e+07 0 0.145606 0.994428 0.82718 1.1792e+08 0.00361416 2.70173e+07 3.24169e+07 2.73287e+07 254 2.73465e+07 3.21482e+07 0.00308205 2.72076e+07 49.8727 0.00264874 0.996302 0 50.2865 GTEX-1LVAN-1326-SM-CNPQE 1 C1 2 pieces; lobular and ductal elements in predominantly fibrous stroma; 10% fat content 7.3 Breast Breast - Mammary Tissue 0008367 435 765 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985147 339420 0.967849 0.988006 0.734591 25453 1 76 0.00585619 152 0 8.66357e+07 0.0316665 365720 8.76874e+07 2.17732e+07 25498 4.30576e+07 0 0.233259 0.988006 0.72578 8.66357e+07 0.00818897 1.90078e+07 9.63831e+06 1.91482e+07 162 1.92249e+07 1.31632e+07 0.0070192 1.91668e+07 49.9244 0.00417072 0.990865 0 50.184 GTEX-1LVAN-1426-SM-COH3X 1 C1 6 pieces; mild focal plaque formation 6.9 Blood Vessel Artery - Aorta 0001496 436 764 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992961 194815 0.971913 0.994021 0.762312 23084 1 76 0.00348832 159 0 8.00984e+07 0.0277602 300267 8.05802e+07 7.47214e+06 23111 3.99067e+07 0 0.209601 0.994021 0.757754 8.00984e+07 0.00426225 1.74506e+07 6.20771e+06 1.73949e+07 175 1.73678e+07 1.24052e+07 0.00387487 1.75613e+07 50.2769 0.00372631 0.995082 0 49.92 GTEX-1LVAN-1526-SM-CNPQN 0 C1 2 pieces; no fat and <1% fibrous content 7.4 Heart Heart - Atrial Appendage 0006631 448 752 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.987643 353454 0.974164 0.9901 0.807094 23078 1 76 0.00589033 266 0 9.7979e+07 0.0256433 2.25329e+06 9.89587e+07 2.38164e+07 23100 4.87528e+07 0 0.16707 0.9901 0.799103 9.7979e+07 0.00790338 2.05487e+07 2.07704e+07 2.09803e+07 266 2.11153e+07 1.20218e+07 0.00689436 2.06106e+07 49.3952 0.02277 0.992557 0 50.5197 GTEX-1LVAN-1626-SM-CNPQ7 0 C1 6 pieces; focally sloughed surface 7.8 Vagina Vagina 0000996 463 737 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.984874 300985 0.969927 0.987828 0.750725 23778 1 76 0.00583172 142 0 8.37646e+07 0.0298579 267070 8.47967e+07 2.18878e+07 23808 4.16469e+07 0 0.219202 0.987828 0.741587 8.37646e+07 0.00848629 1.84899e+07 1.26713e+07 1.85792e+07 159 1.86404e+07 1.34393e+07 0.00715504 1.8671e+07 50.0411 0.00314953 0.990782 0 50.1205 GTEX-1LVAN-1726-SM-CNNR1 1 C1 2 pieces; scattered enlarged myofibers; slight increase of interstitial fibrous tissue 7.4 Heart Heart - Left Ventricle 0006566 456 744 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.990884 234520 0.977489 0.993475 0.834969 20821 1 76 0.00257311 151 0 6.96039e+07 0.0223275 1.55586e+06 7.0061e+07 7.80868e+06 20839 3.46279e+07 0 0.14252 0.993475 0.829521 6.96039e+07 0.00444351 1.52265e+07 8.28418e+06 1.54367e+07 182 1.54814e+07 9.59009e+06 0.00350587 1.53317e+07 49.7571 0.0222073 0.996065 0 50.3426 GTEX-1LVAN-1826-SM-CNPOP 1 C1 2 pieces; moderately occlusive fibroatheromatous plaque; 1 piece has 40% untrimmed external adipose content 7.7 Blood Vessel Artery - Coronary 0001621 480 720 BP-73217 RNA Extraction from Paxgene-derived Lysate Plate Based 03/30/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986636 278199 0.973416 0.989183 0.815039 23662 1 76 0.00580872 169 0 9.02617e+07 0.026175 306658 9.12487e+07 2.37109e+07 23688 4.48875e+07 0 0.158377 0.989183 0.806222 9.02617e+07 0.00788981 1.93812e+07 7.86676e+06 1.95231e+07 187 1.95557e+07 1.62121e+07 0.00684659 1.95644e+07 50.0111 0.00336068 0.991729 0 50.1824 GTEX-1LVAN-2126-SM-CNPQ8 1 C1 6 pieces; well dissected muscularis propria 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 492 708 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.986142 343722 0.973417 0.988962 0.831125 23933 1 76 0.00573808 281 0 1.12407e+08 0.0262919 795796 1.13662e+08 3.02025e+07 23965 5.59057e+07 0 0.142292 0.988962 0.821951 1.12407e+08 0.00829146 2.39872e+07 1.13957e+07 2.4287e+07 300 2.43427e+07 1.94848e+07 0.00701113 2.42252e+07 49.8791 0.00700143 0.991783 0 50.3105 GTEX-1LVAN-2326-SM-CNNPY 1 C1 6 pieces; focal submucosal glands in 2 pieces 9.4 Esophagus Esophagus - Mucosa 0006920 503 697 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992 367371 0.972414 0.993817 0.797005 23569 1 76 0.00247588 278 0 1.13583e+08 0.0272934 407937 1.1429e+08 1.27014e+07 23600 5.65802e+07 0 0.175409 0.993817 0.792077 1.13583e+08 0.00345021 2.53433e+07 1.8562e+07 2.55832e+07 299 2.56295e+07 2.20499e+07 0.00296215 2.54903e+07 49.8638 0.00356933 0.995634 0 50.2355 GTEX-1LVAN-2426-SM-CNNPZ 2 C1 6 pieces; mucosal autolysis varies from slight to severe; muscularis missing on 1 piece 5.7 Stomach Stomach 0000945 521 679 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.985953 206187 0.979448 0.988866 0.849905 22512 1 76 0.00264444 340 0 9.01497e+07 0.0201398 2.36834e+06 9.11647e+07 1.03134e+07 22526 4.48355e+07 0 0.129543 0.988866 0.840443 9.01497e+07 0.00456889 2.04289e+07 6.11642e+07 2.08357e+07 318 2.08027e+07 1.42672e+07 0.00360383 2.06917e+07 49.8662 0.0259787 0.99178 0 50.4928 GTEX-1LVAN-2526-SM-CNPPC 2 C1 6 pieces; mucosal autolysis varies from slight to severe 7.1 Colon Colon - Transverse 0001157 521 679 BP-73249 RNA Extraction from Paxgene-derived Lysate Plate Based 03/31/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.981895 330802 0.973005 0.98529 0.844707 22917 1 76 0.0058117 138 0 7.34916e+07 0.026532 616984 7.45888e+07 1.90973e+07 22928 3.65103e+07 0 0.128298 0.98529 0.832282 7.34916e+07 0.00903538 1.58399e+07 7.81234e+06 1.60764e+07 161 1.60653e+07 1.16649e+07 0.00741799 1.60827e+07 50.0271 0.00827181 0.988685 0 50.3706 GTEX-1LVAN-2626-SM-CNPQF 1 C1 6 pieces; well dissected muscularis propria 7 Colon Colon - Sigmoid 0001159 541 659 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985484 320553 0.970388 0.988755 0.800314 23887 1 76 0.00563227 155 0 8.1079e+07 0.0293839 738472 8.20011e+07 2.02875e+07 23913 4.02962e+07 0 0.170073 0.988755 0.791315 8.1079e+07 0.00893605 1.74994e+07 8.1653e+06 1.76205e+07 169 1.76665e+07 1.23417e+07 0.0072787 1.76969e+07 50.0431 0.00900563 0.992025 0 50.1725 GTEX-1LVAN-2726-SM-CNPQG 0 C1 2 pieces; 1 with numerous corpora albicantia 7.7 Ovary Ovary 0000992 531 669 BP-73690 RNA Extraction from Paxgene-derived Lysate Plate Based 04/12/2016 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.98383 243559 0.970507 0.98717 0.760431 23831 1 76 0.00592287 134 0 7.62405e+07 0.0292051 295220 7.72314e+07 2.10075e+07 23861 3.78821e+07 0 0.210076 0.98717 0.750675 7.62405e+07 0.00877161 1.65411e+07 7.59143e+06 1.66598e+07 149 1.67004e+07 1.17366e+07 0.00734242 1.6745e+07 50.0666 0.00382254 0.99051 0 50.1788 GTEX-1LVAO-0003-SM-DE1KQ B1 Blood Whole Blood 0013756 851 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1LVAO-0003-SM-DJWXB B1 Blood Whole Blood 0013756 851 BP-63070 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/04/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1LVAO-0006-SM-CXZIU B1 7.6 Blood Whole Blood 0013756 851 BP-63078 RNA isolation_PAXgene Blood RNA (Manual) 05/04/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.980046 669587 0.977998 0.981362 0.766905 19875 1 76 0.00200546 268 0 1.31674e+08 0.0212273 465087 1.34175e+08 8.79057e+06 19894 6.55759e+07 0 0.211093 0.981362 0.752611 1.31674e+08 0.00281416 3.03714e+07 1.68237e+08 3.0977e+07 280 3.10254e+07 3.20566e+07 0.00240927 3.05135e+07 49.5841 0.00346627 0.982678 0 50.4935 GTEX-1LVAO-0011-R11b-SM-EXOI8 C1, B1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 884 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.988781 555894 0.953693 0.990975 0.75411 24608 1 76 0.00227885 373 0 1.19069e+08 0.0458111 3.6876e+06 1.20153e+08 6.21435e+06 24653 5.92008e+07 0 0.199583 0.990975 0.747305 1.19069e+08 0.00369363 2.58479e+07 1.31419e+07 2.60577e+07 335 2.60617e+07 1.42129e+07 0.00298467 2.6063e+07 50.0012 0.0306908 0.99317 0 50.2021 GTEX-1LVAO-0011-R2a-SM-EYYX1 C1, B1, A1 6.4 Brain Brain - Substantia nigra 0002038 884 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.983995 139941 0.977746 0.988226 0.877629 21895 1 76 0.00217061 277 0 9.196e+07 0.0219934 9.82458e+06 9.30557e+07 3.41711e+06 21906 4.5697e+07 0 0.100116 0.988226 0.867296 9.196e+07 0.00353308 2.04031e+07 1.44564e+07 2.08133e+07 323 2.0736e+07 1.0842e+07 0.00284893 2.08057e+07 50.0839 0.105578 0.992458 0 50.4977 GTEX-1LVAO-0011-R3a-SM-EXOI7 C1, B1, A1 5.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 884 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.990339 415984 0.973532 0.992204 0.882802 23783 1 76 0.00193793 375 0 1.15767e+08 0.0259886 8.22221e+06 1.16677e+08 6.40851e+06 23799 5.76355e+07 0 0.0907291 0.992204 0.87592 1.15767e+08 0.00296986 2.56631e+07 1.572e+07 2.59297e+07 335 2.58833e+07 1.5259e+07 0.00245292 2.58962e+07 50.0125 0.0704697 0.994068 0 50.2583 GTEX-1LVAO-0011-R4a-SM-EXURO C1, B1, A1 6 Brain Brain - Amygdala 0001876 884 BP-80059 RNA isolation_PAXgene Tissue miRNA 11/01/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.990675 466227 0.976249 0.991627 0.890929 21670 1 76 0.00164467 200 0 7.14341e+07 0.0233551 7.19804e+06 7.20373e+07 1.89892e+06 21684 3.55704e+07 0 0.0853198 0.991627 0.883469 7.14341e+07 0.00215722 1.58393e+07 9.70936e+06 1.62352e+07 254 1.60913e+07 8.78755e+06 0.0019007 1.60382e+07 49.9174 0.099921 0.992578 0 50.6172 GTEX-1LVAO-0011-R6b-SM-EZ6MX C1, B1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 884 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990143 316060 0.972456 0.99181 0.887655 22924 1 76 0.00234488 276 0 1.00068e+08 0.0271575 6.37054e+06 1.00895e+08 7.50422e+06 22936 4.98645e+07 0 0.0848009 0.99181 0.880385 1.00068e+08 0.00372025 2.20987e+07 1.30171e+07 2.23737e+07 319 2.23e+07 1.39636e+07 0.00303141 2.23138e+07 50.0154 0.0631405 0.993476 0 50.3092 GTEX-1LVAO-0011-R7a-SM-EYYWZ C1, B1, A1 7.4 Brain Brain - Putamen (basal ganglia) 0001874 884 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985674 273505 0.969376 0.989873 0.859581 23866 1 76 0.00215826 271 0 9.87151e+07 0.0303099 6.57042e+06 9.9725e+07 3.68953e+06 23885 4.90521e+07 0 0.109795 0.989873 0.850876 9.87151e+07 0.00388534 2.16411e+07 1.44004e+07 2.194e+07 314 2.19276e+07 1.1659e+07 0.00301814 2.20073e+07 50.0906 0.0658854 0.994072 0 50.3429 GTEX-1LVAO-0011-R9a-SM-EZ6MY C1, B1, A1 6.6 Brain Brain - Spinal cord (cervical c-1) 0006469 884 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985563 259236 0.961642 0.987266 0.836394 22640 1 76 0.00263056 287 0 8.22124e+07 0.038072 6.67573e+06 8.32728e+07 6.21836e+06 22661 4.09433e+07 0 0.125248 0.987266 0.825743 8.22124e+07 0.00405659 1.81453e+07 1.18711e+07 1.84916e+07 308 1.8306e+07 8.7459e+06 0.00334235 1.84486e+07 50.194 0.080167 0.98897 0 50.4726 GTEX-1LVAO-0226-SM-E9U6O 1 C1 2 pieces; 5 & 10% fibrous content 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 974 967 BP-83440 RNA Extraction from Paxgene-derived Lysate Plate Based 02/22/2017 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989175 225417 0.9753 0.990026 0.798716 21817 1 76 0.00178933 144 0 6.67867e+07 0.0243689 377626 6.74595e+07 3.18991e+06 21840 3.3268e+07 0 0.176584 0.990026 0.79075 6.67867e+07 0.00275302 1.45948e+07 6.38446e+06 1.46889e+07 155 1.46591e+07 1.23488e+07 0.00227076 1.4683e+07 50.0406 0.00559782 0.990877 0 50.1608 GTEX-1LVAO-0326-SM-E6CIW 1 C1 2 pieces; 20% internal and external fat content 6.1 Nerve Nerve - Tibial 0001323 976 965 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991118 313267 0.968756 0.992271 0.695911 23954 1 76 0.00216895 175 0 8.50653e+07 0.0309281 460531 8.57279e+07 5.09704e+06 23999 4.23354e+07 0 0.272845 0.992271 0.690532 8.50653e+07 0.00277912 1.86962e+07 7.48643e+06 1.88925e+07 185 1.87705e+07 1.20238e+07 0.00247368 1.89066e+07 50.1806 0.00537201 0.993424 0 50.2612 GTEX-1LVAO-0426-SM-EVYCI 1 C1 2 pieces; mild fibrous intimal thickening; well trimmed 7 Blood Vessel Artery - Tibial 0007610 980 961 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992341 219721 0.973635 0.992816 0.798605 20815 1 76 0.00195288 140 0 7.18924e+07 0.0260197 489649 7.24126e+07 3.00987e+06 20836 3.58393e+07 0 0.175031 0.992816 0.792868 7.18924e+07 0.00285014 1.54531e+07 4.98038e+06 1.55771e+07 165 1.55285e+07 1.31178e+07 0.0024013 1.55355e+07 50.0112 0.00676193 0.993291 0 50.1998 GTEX-1LVAO-0526-SM-EWRNS 1 C1 2 pieces; severe atrophy with 20% & 50% internal fat 5.9 Muscle Muscle - Skeletal 0011907 986 955 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987557 222691 0.977658 0.990063 0.802002 22925 1 76 0.00243187 276 0 9.16031e+07 0.0221384 2.38717e+06 9.25225e+07 6.26789e+06 22949 4.5599e+07 0 0.175656 0.990063 0.794032 9.16031e+07 0.00301376 2.01613e+07 1.11782e+07 2.04369e+07 299 2.03748e+07 1.23945e+07 0.00271528 2.0407e+07 50.0395 0.0258009 0.99257 0 50.3395 GTEX-1LVAO-0626-SM-EWRNT 1 C1 2 pieces; 10% fat content 5.9 Heart Heart - Atrial Appendage 0006631 1019 922 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988556 237145 0.979531 0.991286 0.824886 22097 1 76 0.00237091 267 0 9.35209e+07 0.0202716 3.01935e+06 9.4343e+07 6.30028e+06 22122 4.65491e+07 0 0.154645 0.991286 0.817698 9.35209e+07 0.00309879 2.04117e+07 1.30051e+07 2.04926e+07 306 2.05376e+07 1.27527e+07 0.00272534 2.05691e+07 50.0382 0.032004 0.994017 0 50.0989 GTEX-1LVAO-0826-SM-E6CIU 1 C1 6 pieces; minimal intimal fibrous thickening; well trimmed 5.9 Blood Vessel Artery - Aorta 0001496 1023 918 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991588 202855 0.974553 0.992634 0.780579 22194 1 76 0.00220008 170 0 8.22807e+07 0.0249868 225155 8.28912e+07 5.06945e+06 22228 4.09422e+07 0 0.193975 0.992634 0.774829 8.22807e+07 0.00270018 1.77958e+07 6.99101e+06 1.79444e+07 186 1.78632e+07 1.53387e+07 0.00244987 1.79566e+07 50.1304 0.00271627 0.99368 0 50.2078 GTEX-1LVAO-1226-SM-DIPGB 2 C1 2 piece; moderate interstitial fibrosis; 3mm focus of alveolar hemorrhage 7.4 Lung Lung 0008952 1041 900 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992587 455999 0.978616 0.9939 0.777791 23939 1 76 0.00239921 275 0 1.0771e+08 0.0210084 829972 1.08371e+08 7.75342e+06 23981 5.36453e+07 0 0.200824 0.9939 0.773046 1.0771e+08 0.00334786 2.38578e+07 9.01186e+06 2.40112e+07 304 2.40251e+07 1.90038e+07 0.00287291 2.39757e+07 49.9486 0.00765862 0.995212 0 50.1602 GTEX-1LVAO-2126-SM-DIPGA 1 C1 2 pieces; 5% stromal content 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1092 849 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993414 328193 0.97877 0.994509 0.80677 22879 1 76 0.00225978 211 0 9.26801e+07 0.0209414 1.05906e+06 9.31918e+07 7.21149e+06 22911 4.61773e+07 0 0.172 0.994509 0.802341 9.26801e+07 0.00309709 2.05353e+07 1.02237e+07 2.07085e+07 232 2.06935e+07 1.71533e+07 0.00267798 2.0654e+07 49.9523 0.0113643 0.995604 0 50.21 GTEX-1LVAO-2626-SM-EVR4S 1 C1 4 pieces; well dissected; focal interstitial scarring and atrophy; 20% fat content 7 Salivary Gland Minor Salivary Gland 0006330 1109 832 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987582 386320 0.972708 0.989813 0.768656 25937 1 76 0.00246604 292 0 1.21881e+08 0.0265408 1.24782e+06 1.23135e+08 9.21667e+06 25992 6.06163e+07 0 0.204052 0.989813 0.760826 1.21881e+08 0.00389859 2.71115e+07 1.50362e+07 2.73959e+07 330 2.73814e+07 1.95335e+07 0.0031807 2.73698e+07 49.9894 0.0101337 0.992043 0 50.2609 GTEX-1LVAO-2726-SM-E9TJ8 1 C1 6 pieces; well trimmed; 5% dermal fat 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1111 830 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983358 373121 0.976052 0.98524 0.74857 23711 1 76 0.00222079 167 0 7.87331e+07 0.0237263 706230 7.99126e+07 3.69386e+06 23749 3.91601e+07 0 0.227482 0.98524 0.73752 7.87331e+07 0.00287087 1.73541e+07 7.43768e+06 1.74909e+07 181 1.74778e+07 1.1972e+07 0.00254521 1.75075e+07 50.0425 0.00883753 0.987121 0 50.1963 GTEX-1LVAO-2826-SM-E9TJH 1 C1 6 pieces; well dissected muscularis 5.8 Colon Colon - Sigmoid 0001159 1115 826 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.971102 299811 0.968949 0.972534 0.818973 22199 1 76 0.00210653 162 0 7.48809e+07 0.0308079 1.29994e+06 7.69956e+07 3.35511e+06 22218 3.7249e+07 0 0.149976 0.972534 0.796479 7.48809e+07 0.00263014 1.60462e+07 1.04797e+07 1.62913e+07 183 1.62147e+07 1.27941e+07 0.00236795 1.62316e+07 50.026 0.0168833 0.973966 0 50.3789 GTEX-1M4P7-0004-SM-DE1JT B1 Blood Whole Blood 0013756 863 BP-63303,BP-63309 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1M4P7-0004-SM-DJWWT B1 Blood Whole Blood 0013756 863 BP-63303,BP-63309 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/08/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1M4P7-0005-SM-CXZIS B1 7.2 Blood Whole Blood 0013756 863 BP-63282 RNA isolation_PAXgene Blood RNA (Manual) 05/08/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.960567 430451 0.986336 0.961691 0.818803 18389 1 76 0.0017461 265 0 1.40744e+08 0.0125295 501956 1.4635e+08 9.34634e+06 18400 7.0101e+07 0 0.167532 0.961691 0.787436 1.40744e+08 0.00250446 3.33873e+07 2.45149e+08 3.39468e+07 292 3.39215e+07 4.19249e+07 0.00212483 3.35526e+07 49.7267 0.00342983 0.962814 0 50.4155 GTEX-1M4P7-0011-R11b-SM-EXOIK C1, B1, A1 6.5 Brain Brain - Cerebellar Hemisphere 0002037 922 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.988176 759983 0.945747 0.990387 0.772201 23949 1 76 0.00227588 372 0 1.11773e+08 0.0539241 4.18248e+06 1.12857e+08 6.77486e+06 23984 5.55848e+07 0 0.173545 0.990387 0.764778 1.11773e+08 0.0034743 2.38824e+07 2.41698e+07 2.43833e+07 352 2.43682e+07 1.11378e+07 0.00287375 2.41142e+07 49.7381 0.0370598 0.992599 0 50.519 GTEX-1M4P7-0011-R3a-SM-EYYX2 C1, B1, A1 5.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 922 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.978954 261419 0.972959 0.983766 0.86799 19033 1 76 0.0024755 265 0 7.00148e+07 0.0268503 1.26383e+07 7.11702e+07 2.8371e+06 19040 3.47562e+07 0 0.104969 0.983766 0.853899 7.00148e+07 0.0042315 1.53299e+07 2.24513e+07 1.57822e+07 315 1.56419e+07 2.97034e+06 0.0033492 1.57131e+07 50.1136 0.177578 0.988577 0 50.7269 GTEX-1M4P7-0126-SM-DKPQF 0 C1 2 pieces, ~30% adherent/interstitial fat/vascular elements 7.3 Muscle Muscle - Skeletal 0011907 1058 584 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992955 401273 0.977076 0.994818 0.852284 21958 1 76 0.00262504 271 0 1.07942e+08 0.0227252 2.49464e+06 1.08504e+08 1.1169e+07 21976 5.37899e+07 0 0.124792 0.994818 0.847867 1.07942e+08 0.00281019 2.3412e+07 1.4448e+07 2.38166e+07 307 2.39104e+07 2.21727e+07 0.00271744 2.35116e+07 49.5795 0.0229912 0.996682 0 50.4283 GTEX-1M4P7-0226-SM-DIPEV 0 C1 6 pieces, minimal dermal fat; squamous epithelium up to ~30 microns 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1059 583 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992876 396458 0.977858 0.994046 0.736027 25471 1 76 0.00240938 216 0 1.03976e+08 0.0218252 679614 1.04599e+08 7.951e+06 25522 5.17965e+07 0 0.241831 0.994046 0.731645 1.03976e+08 0.00334027 2.30757e+07 1.08815e+07 2.3099e+07 233 2.31661e+07 1.79963e+07 0.00287428 2.31257e+07 49.9563 0.00649734 0.995216 0 50.0252 GTEX-1M4P7-0426-SM-DKPQG 0 C1 2 pieces, prominent Monckeberg sclerosis; minimal atherosis; not adherent fat 6.9 Blood Vessel Artery - Tibial 0007610 1061 581 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989718 220548 0.974937 0.991759 0.805926 22279 1 76 0.00294736 202 0 9.38661e+07 0.0246686 351929 9.46461e+07 1.01135e+07 22306 4.66958e+07 0 0.169011 0.991759 0.799284 9.38661e+07 0.0032045 2.0264e+07 8.71478e+06 2.0372e+07 216 2.03944e+07 1.77882e+07 0.00307567 2.04281e+07 50.0413 0.00371837 0.993799 0 50.1329 GTEX-1M4P7-0526-SM-EVYCP 0 C1 2 pieces, nubbins of adherent fat up to ~1mm, rep delineated 6.4 Nerve Nerve - Tibial 0001323 1062 580 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.986319 251529 0.963647 0.986877 0.674194 24465 1 76 0.00222943 152 0 7.90551e+07 0.0361047 180348 8.01063e+07 3.43409e+06 24508 3.93711e+07 0 0.289453 0.986877 0.665347 7.90551e+07 0.00334733 1.73182e+07 7.40314e+06 1.74401e+07 165 1.73715e+07 1.05072e+07 0.00278806 1.74338e+07 50.0894 0.00225136 0.987436 0 50.1753 GTEX-1M4P7-0626-SM-EVR51 2 C1 2 pieces, no abnormality, moderately advanced autolysis 6.3 Thyroid Thyroid 0002046 1064 578 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98746 209884 0.96755 0.989312 0.742439 24387 1 76 0.00219108 168 0 8.32669e+07 0.032145 399405 8.41665e+07 5.54668e+06 24436 4.14358e+07 0 0.225111 0.989312 0.734504 8.32669e+07 0.00364931 1.82069e+07 8.3514e+06 1.83572e+07 180 1.83344e+07 1.38143e+07 0.00291883 1.83793e+07 50.0612 0.00474542 0.991165 0 50.2055 GTEX-1M4P7-0726-SM-E6CJ3 0 C1 6 pieces, minimal dermal fat; squamous epithelium is ~35 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1065 577 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992261 228193 0.977025 0.99365 0.748655 24012 1 76 0.00204647 171 0 7.75279e+07 0.0227562 522170 7.80234e+07 4.89268e+06 24043 3.85988e+07 0 0.228369 0.99365 0.743901 7.75279e+07 0.00256389 1.70496e+07 7.19623e+06 1.72075e+07 170 1.71276e+07 1.30990e+07 0.00230482 1.72257e+07 50.1427 0.00669248 0.995039 0 50.2304 GTEX-1M4P7-0826-SM-E9TJR 1 C1 2 pieces, moderate congestion/edema 6.9 Lung Lung 0008952 1066 576 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.974976 246661 0.972351 0.976336 0.756162 23147 1 76 0.00234405 146 0 7.25922e+07 0.0273953 712471 7.43517e+07 3.31687e+06 23177 3.60978e+07 0 0.216188 0.976336 0.738269 7.25922e+07 0.00294201 1.59515e+07 6.56851e+06 1.61613e+07 170 1.6105e+07 1.03044e+07 0.00264261 1.6106e+07 50.0015 0.00958245 0.977696 0 50.3267 GTEX-1M4P7-2626-SM-E9U5F 1 C1 2 pieces, fibroadipose elements only 6.9 Breast Breast - Mammary Tissue 0008367 1124 518 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.98144 291103 0.977685 0.982586 0.745971 22921 1 76 0.00199497 157 0 7.54535e+07 0.0220337 449653 7.67907e+07 3.18685e+06 22953 3.75749e+07 0 0.231713 0.982586 0.732981 7.54535e+07 0.00304522 1.67344e+07 8.34707e+06 1.68345e+07 172 1.67994e+07 1.18206e+07 0.00251949 1.68591e+07 50.0886 0.00585557 0.983733 0 50.1492 GTEX-1M4P7-2726-SM-E9TJQ 1 C1 4 pieces, no abnormalities 6 Brain Brain - Cortex 0001870 1180 462 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985049 481851 0.966465 0.98713 0.834386 23001 1 76 0.00218463 370 0 8.37734e+07 0.0333356 7.55298e+06 8.48656e+07 3.52674e+06 23018 4.16758e+07 0 0.132079 0.98713 0.823648 8.37734e+07 0.00283544 1.8295e+07 2.31208e+07 1.86541e+07 347 1.84723e+07 6.72728e+06 0.00250935 1.86276e+07 50.2093 0.0889993 0.989212 0 50.4859 GTEX-1M5QR-0003-SM-DE1IS B1 Blood Whole Blood 0013756 -36 BP-63543 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/15/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1M5QR-0003-SM-DJWWP B1 Blood Whole Blood 0013756 -36 BP-63543 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/15/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1M5QR-0005-SM-DKPPP B1 8.1 Blood Whole Blood 0013756 -36 BP-63545 RNA isolation_PAXgene Blood RNA (Manual) 05/15/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.978753 879070 0.967159 0.981301 0.816124 17656 1 76 0.00274825 150 0 1.1676e+08 0.0319849 222612 1.18985e+08 1.16996e+07 17666 5.80663e+07 0 0.151034 0.981301 0.800863 1.1676e+08 0.00390949 2.68242e+07 1.58762e+08 2.70694e+07 196 2.71455e+07 3.06682e+07 0.00332736 2.706e+07 49.9211 0.00187092 0.983848 0 50.2275 GTEX-1M5QR-0526-SM-EV7AW 1 B1 6 pieces; target muscularis, residual attached fat/vessels on 4 of 6 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 436 842 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986129 251036 0.969298 0.987366 0.779335 23671 1 76 0.00230384 274 0 9.79209e+07 0.0305141 1.61974e+06 9.91738e+07 1.06519e+07 23708 4.87758e+07 0 0.189964 0.987366 0.769489 9.79209e+07 0.00389782 2.12465e+07 9.52542e+06 2.14945e+07 314 2.14004e+07 1.39593e+07 0.00309983 2.14558e+07 50.0646 0.0163324 0.988604 0 50.2901 GTEX-1M5QR-0626-SM-EWROA 1 B1 6 pieces; target muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 437 841 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985983 220200 0.96873 0.988599 0.785008 23863 1 76 0.00236816 209 0 8.48964e+07 0.03107 887333 8.58755e+07 6.03105e+06 23898 4.22343e+07 0 0.183722 0.988599 0.776058 8.48964e+07 0.00303647 1.8353e+07 7.81067e+06 1.85779e+07 228 1.85505e+07 1.29985e+07 0.00269361 1.85783e+07 50.0376 0.0103328 0.991215 0 50.3045 GTEX-1M5QR-0726-SM-DHXK7 1 B1 6 pieces 6.3 Esophagus Esophagus - Mucosa 0006920 440 838 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994616 226968 0.973619 0.995391 0.812119 21577 1 76 0.00221829 110 0 4.78221e+07 0.0262138 189257 4.80436e+07 2.63052e+06 21590 2.38302e+07 0 0.161501 0.995391 0.808376 4.78221e+07 0.00273743 1.06836e+07 5.07181e+06 1.07912e+07 116 1.07505e+07 8.80806e+06 0.00247766 1.07622e+07 50.0271 0.00393928 0.996166 0 50.2506 GTEX-1M5QR-0926-SM-DHXK8 1 B1 2 pieces; both include internal and attached fat, up to 50% in one piece, mild fibrosis 6 Pancreas Pancreas 0001150 444 834 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.99082 291234 0.97092 0.991726 0.801894 23709 1 76 0.00236499 201 0 1.06068e+08 0.0287275 511039 1.06953e+08 6.03258e+06 23742 5.28632e+07 0 0.169026 0.991726 0.795259 1.06068e+08 0.00254492 2.39063e+07 1.98259e+07 2.44486e+07 235 2.43866e+07 2.45685e+07 0.00245488 2.40602e+07 49.6632 0.00477818 0.992631 0 50.5608 GTEX-1M5QR-1026-SM-DHXK9 1 B1 2 pieces; interstitial and focal patchy fibrosis 6 Heart Heart - Left Ventricle 0006566 454 824 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994768 277524 0.981495 0.9955 0.856211 21504 1 76 0.00182391 267 0 1.08332e+08 0.0183736 4.09002e+06 1.08822e+08 5.74652e+06 21523 5.40377e+07 0 0.125284 0.9955 0.852358 1.08332e+08 0.00206324 2.38855e+07 1.60827e+07 2.43344e+07 310 2.41983e+07 1.31512e+07 0.00194348 2.40812e+07 49.8787 0.0375845 0.996232 0 50.4654 GTEX-1M5QR-1126-SM-EYYWM 1 B1 2 pieces; one is disrupted due to calcific atherosclerosis, 2nd is 25-50% occluded with plaque and has partial rim of fat (1.5mm) 5.8 Blood Vessel Artery - Coronary 0001621 457 821 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984415 111217 0.975657 0.986434 0.848931 21447 1 76 0.00209152 163 0 7.09827e+07 0.0240312 431453 7.19589e+07 2.60167e+06 21460 3.53299e+07 0 0.126726 0.986434 0.837414 7.09827e+07 0.00295649 1.53091e+07 4.82963e+06 1.54237e+07 182 1.53779e+07 1.31542e+07 0.00252312 1.54947e+07 50.1891 0.00599583 0.988453 0 50.1865 GTEX-1M5QR-1226-SM-EWROB 1 B1 6 pieces; includes up to ~10% attached and internal fat, epidermis measures 7 Skin Skin - Sun Exposed (Lower leg) 0004264 459 819 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985809 244277 0.974191 0.988799 0.802947 23263 1 76 0.00230386 295 0 8.94665e+07 0.0255932 991759 9.048e+07 6.41512e+06 23294 4.45053e+07 0 0.171244 0.988799 0.793953 8.94665e+07 0.00303679 1.94745e+07 9.55532e+06 1.9747e+07 259 1.97558e+07 1.46006e+07 0.00266064 1.97025e+07 49.9325 0.0109611 0.991789 0 50.3473 GTEX-1M5QR-1326-SM-EWROC 0 B1 2 pieces; both include ~20 internal fat 7.9 Muscle Muscle - Skeletal 0011907 462 816 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989434 468326 0.98395 0.992511 0.881039 20111 1 76 0.00198367 282 0 1.15319e+08 0.0158333 1.7803e+06 1.1619e+08 7.93069e+06 20123 5.73921e+07 0 0.102911 0.992511 0.874441 1.15319e+08 0.00283257 2.51798e+07 1.40241e+07 2.5338e+07 325 2.54028e+07 2.41678e+07 0.00239688 2.54043e+07 50.0014 0.0153224 0.995587 0 50.1566 GTEX-1M5QR-1626-SM-E9U5O 1 B1 3 pieces; interstitial fibrosis and hypertrophy, 1 piece includes focus of lymphocytes and ~40% fat 6.5 Heart Heart - Atrial Appendage 0006631 472 806 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985702 152513 0.97547 0.986563 0.824633 21986 1 76 0.00156063 192 0 6.83564e+07 0.0243779 1.9935e+06 6.92874e+07 2.69305e+06 22004 3.40784e+07 0 0.150837 0.986563 0.813553 6.83564e+07 0.00241088 1.50954e+07 7.30362e+06 1.52513e+07 212 1.51399e+07 7.92363e+06 0.00198538 1.52543e+07 50.1882 0.0287714 0.987424 0 50.2568 GTEX-1M5QR-1726-SM-EV7AU 2 B1 2 pieces; 5 and 20% fat, predominantly cortex 6.5 Adrenal Gland Adrenal Gland 0002369 477 801 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.987358 267645 0.972237 0.988924 0.801875 23903 1 76 0.00225553 269 0 1.04614e+08 0.0275557 2.68445e+06 1.05785e+08 1.1492e+07 23938 5.21133e+07 0 0.170362 0.988924 0.792993 1.04614e+08 0.00408992 2.28161e+07 1.24008e+07 2.31854e+07 327 2.31173e+07 1.30912e+07 0.00317127 2.30309e+07 49.9064 0.0253764 0.990489 0 50.4014 GTEX-1M5QR-2026-SM-DKPQL 1 B1 2 pieces; atherosclerosis with luminal compromise >50%, medial calcific sclerosis 6.3 Blood Vessel Artery - Tibial 0007610 485 793 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991727 214401 0.97388 0.993788 0.801492 23137 1 76 0.00259387 274 0 9.31291e+07 0.0258076 497733 9.37112e+07 8.10632e+06 23163 4.63605e+07 0 0.172388 0.993788 0.796513 9.31291e+07 0.00310396 2.02907e+07 9.43704e+06 2.03757e+07 273 2.03775e+07 1.55483e+07 0.00284839 2.04672e+07 50.1097 0.00531135 0.99585 0 50.1045 GTEX-1M5QR-2126-SM-DKPQM 1 B1 2 pieces; fragmented, mature fat with <10% stroma/small vessels 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 487 791 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992276 224824 0.97422 0.994145 0.77899 23210 1 76 0.00278135 168 0 8.18021e+07 0.0254893 705670 8.22839e+07 8.19691e+06 23246 4.07402e+07 0 0.19523 0.994145 0.774429 8.18021e+07 0.00284393 1.80376e+07 8.40653e+06 1.82158e+07 195 1.82319e+07 1.31807e+07 0.00281258 1.81647e+07 49.9077 0.00857604 0.996013 0 50.2458 GTEX-1M5QR-2526-SM-E9U5P 1 B1 2 pieces; gynecomastia 7.6 Breast Breast - Mammary Tissue 0008367 508 770 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991012 300422 0.967763 0.991805 0.759725 25133 1 76 0.00174726 208 0 9.19207e+07 0.0319707 364366 9.26802e+07 3.48466e+06 25182 4.58297e+07 0 0.208038 0.991805 0.753499 9.19207e+07 0.00250189 2.02734e+07 9.13436e+06 2.03813e+07 239 2.03493e+07 1.54931e+07 0.00212428 2.03762e+07 50.0331 0.00393143 0.992597 0 50.1327 GTEX-1M5QR-2626-SM-EV7AV 1 B1 2 pieces; spermatogenesis is present 7.2 Testis Testis 0000473 509 769 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990095 445908 0.934806 0.991209 0.746105 34985 1 76 0.00237435 288 0 1.23395e+08 0.0648648 1.0217e+06 1.24489e+08 1.32875e+07 35067 6.14883e+07 0 0.188701 0.991209 0.739546 1.23395e+08 0.00347674 2.58164e+07 1.53451e+07 2.60103e+07 313 2.60177e+07 2.08238e+07 0.00292493 2.593e+07 49.9156 0.00820714 0.992323 0 50.1871 GTEX-1M5QR-5007-SM-AN49D B1 Heart Heart - Left Ventricle 0006566 455 ChIP-Seq GTEX-1M5QR-5013-SM-AN49C B1 Muscle Muscle - Skeletal 0011907 462 ChIP-Seq GTEX-1MA7W-0004-SM-DE1K6 B1 Blood Whole Blood 0013756 -218 BP-63591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MA7W-0004-SM-DJWYG B1 Blood Whole Blood 0013756 -218 BP-63591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MA7W-0006-SM-DKPPR B1 9.5 Blood Whole Blood 0013756 -218 BP-63592 RNA isolation_PAXgene Blood RNA (Manual) 05/18/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.981441 782718 0.969309 0.983426 0.804966 20459 1 76 0.00291835 270 0 1.36892e+08 0.0297359 168529 1.39199e+08 1.46894e+07 20480 6.81022e+07 0 0.164342 0.983426 0.791625 1.36892e+08 0.00318483 3.14047e+07 1.7189e+08 3.16997e+07 297 3.18207e+07 3.48069e+07 0.00305132 3.15592e+07 49.7937 0.00121071 0.985411 0 50.2337 GTEX-1MA7W-0426-SM-E9TJ5 1 C1 6 pieces, squamous mucosa up to ~0.4mm; ~15-20% thickness;incidental submucosal mucus glands delineated(rep) 8.8 Esophagus Esophagus - Mucosa 0006920 191 1222 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987949 602155 0.979923 0.989884 0.84582 23092 1 76 0.00190651 220 0 9.37188e+07 0.0196945 478874 9.46765e+07 3.78855e+06 23109 4.66424e+07 0 0.134103 0.989884 0.837264 9.37188e+07 0.00249217 2.1088e+07 1.0558e+07 2.11964e+07 248 2.13044e+07 2.04445e+07 0.00219876 2.11505e+07 49.8188 0.005058 0.99182 0 50.1282 GTEX-1MA7W-0526-SM-E6CIN 1 C1 2 pieces; incidental ~2.5mm omental lymph node present, delineated; ~5-10% fascia, vascular elements 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 193 1220 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992792 535704 0.982506 0.994592 0.845814 22230 1 76 0.00164993 380 0 1.07629e+08 0.0171781 773522 1.08214e+08 6.88726e+06 22250 5.35792e+07 0 0.136692 0.994592 0.84124 1.07629e+08 0.00248151 2.38795e+07 9.60852e+06 2.4025e+07 337 2.39202e+07 1.91207e+07 0.00206497 2.41559e+07 50.2452 0.00714805 0.996393 0 50.1519 GTEX-1MA7W-0626-SM-EV79Z 1 C1 6 pieces, mucosa well preserved, ~0.3mm, ~10-15% thickness 8.4 Colon Colon - Transverse 0001157 198 1215 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990742 518276 0.977091 0.992037 0.827492 25443 1 76 0.00231092 392 0 1.37328e+08 0.0221248 1.65489e+06 1.3843e+08 1.35794e+07 25483 6.83818e+07 0 0.149599 0.992037 0.820903 1.37328e+08 0.00393055 3.05101e+07 1.67576e+07 3.07853e+07 341 3.07347e+07 2.38245e+07 0.00311968 3.07181e+07 49.9865 0.0119547 0.993333 0 50.2245 GTEX-1MA7W-0826-SM-DKPPF 1 C1 6 pieces, ~target muscularis delineated, ~50% of tissue, rest is 'contaminant' serosa/mucosa 5.9 Colon Colon - Sigmoid 0001159 208 1205 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 EXCLUDE 0.992017 298597 0.974979 0.994035 0.80852 23422 1 76 0.00270382 276 0 9.4367e+07 0.0248011 738105 9.49333e+07 1.03544e+07 23448 4.70003e+07 0 0.166459 0.994035 0.803697 9.4367e+07 0.00280375 2.06002e+07 8.33324e+06 2.10264e+07 276 2.10245e+07 1.48273e+07 0.00275369 2.07812e+07 49.709 0.00777499 0.996052 0 50.5119 GTEX-1MA7W-0926-SM-DIPFN 1 C1 6 pieces, target muscularis (delineated) is ~60% of tissue, rest is 'contaminant' mucosa/serosa 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 211 1202 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993335 509300 0.977783 0.994743 0.834913 22721 1 76 0.00199309 385 0 1.13441e+08 0.0219147 794599 1.14041e+08 8.59795e+06 22748 5.65269e+07 0 0.142871 0.994743 0.830524 1.13441e+08 0.00328199 2.44695e+07 9.55798e+06 2.4742e+07 332 2.47238e+07 2.083e+07 0.00263663 2.46348e+07 49.9099 0.00696769 0.996152 0 50.2769 GTEX-1MA7W-1026-SM-DKPQK 0 C1 2 pieces, fibrous mastopathy. Rare atrophic duct/lobular units, rep delineated 7.4 Breast Breast - Mammary Tissue 0008367 213 1200 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991683 281487 0.968035 0.993965 0.778117 25855 1 76 0.00276108 286 0 1.1028e+08 0.031573 384082 1.10949e+08 1.17386e+07 25905 5.49033e+07 0 0.189918 0.993965 0.773421 1.1028e+08 0.0030611 2.40726e+07 1.05931e+07 2.43074e+07 316 2.43348e+07 1.91313e+07 0.00291075 2.42801e+07 49.9438 0.00346178 0.996247 0 50.2426 GTEX-1MA7W-1426-SM-EV7A1 1 C1 2 pieces, one largely hilum. Well-preserved oocyctes, rep. aggregates encircled; follicular cysts ensquared 8.4 Ovary Ovary 0000992 222 1191 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.992039 394521 0.9703 0.99305 0.786135 25022 1 76 0.00225468 283 0 1.01247e+08 0.029373 234840 1.01955e+08 1.11735e+07 25068 5.04516e+07 0 0.184165 0.99305 0.780671 1.01247e+08 0.00324145 2.23263e+07 9.77685e+06 2.24795e+07 277 2.24645e+07 1.96418e+07 0.00274757 2.24394e+07 49.9721 0.00230336 0.994062 0 50.1709 GTEX-1MA7W-1526-SM-DHXKS 1 C1 2 pieces, myometrium; trace ~0.5mm nubbin of endometrium delineated 9 Uterus Uterus 0000995 223 1190 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994617 507128 0.975322 0.995425 0.827396 24003 1 76 0.00203717 285 0 1.0705e+08 0.0242544 237920 1.07542e+08 5.57953e+06 24039 5.33627e+07 0 0.147926 0.995425 0.823611 1.0705e+08 0.00252605 2.34413e+07 8.11384e+06 2.36886e+07 308 2.3664e+07 2.19344e+07 0.00228141 2.35472e+07 49.8764 0.00221234 0.996233 0 50.2623 GTEX-1MA7W-1626-SM-DIPFO 0 C1 2 pieces, trace nubbin of adherent fat, delineated 6.4 Nerve Nerve - Tibial 0001323 223 1190 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99335 428670 0.967608 0.994659 0.748057 25521 1 76 0.00222968 281 0 1.06196e+08 0.0321612 555371 1.06766e+08 8.13383e+06 25565 5.29155e+07 0 0.219551 0.994659 0.744061 1.06196e+08 0.00309194 2.33246e+07 9.52618e+06 2.34951e+07 326 2.34828e+07 1.54693e+07 0.00266024 2.34679e+07 49.9841 0.00520175 0.995969 0 50.1821 GTEX-1MA7W-1826-SM-DIPFP 0 C1 2 pieces, ~5-10% interstitial fat, rep delineated 7.8 Muscle Muscle - Skeletal 0011907 231 1182 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993813 578905 0.983105 0.995183 0.862605 20964 1 76 0.00180355 384 0 1.2369e+08 0.0166708 1.35507e+06 1.24289e+08 9.07988e+06 20979 6.1648e+07 0 0.1205 0.995183 0.858449 1.2369e+08 0.00287466 2.71536e+07 1.69409e+07 2.75219e+07 350 2.754e+07 2.321e+07 0.00233836 2.72811e+07 49.7639 0.0109026 0.996552 0 50.3368 GTEX-1MA7W-1926-SM-E6CIO 0 C1 2 pieces, ~5% fascia/vascular elements 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 236 1177 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993404 397297 0.979331 0.994637 0.81787 23084 1 76 0.00179081 282 0 1.03143e+08 0.0203659 517335 1.03699e+08 6.5836e+06 23114 5.13721e+07 0 0.161461 0.994637 0.813484 1.03143e+08 0.00233869 2.26436e+07 8.27364e+06 2.28792e+07 326 2.27772e+07 1.79418e+07 0.00206442 2.28585e+07 50.0891 0.0049888 0.99587 0 50.2587 GTEX-1MA7W-2026-SM-E9TJ6 0 C1 6 pieces, trace dermal fat, ~1-2mm nubbins; squamous epithelium is ~50 microns 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 241 1172 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985716 390597 0.975242 0.987775 0.824989 22551 1 76 0.00195783 224 0 7.96685e+07 0.0245117 403741 8.06545e+07 3.50634e+06 22574 3.96508e+07 0 0.150253 0.987775 0.814903 7.96685e+07 0.00255208 1.72962e+07 7.61508e+06 1.73802e+07 195 1.74185e+07 1.56991e+07 0.00225433 1.74114e+07 49.9898 0.00500581 0.989835 0 50.1211 GTEX-1MA7X-0003-SM-DE1KY B1 Blood Whole Blood 0013756 864 BP-63591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MA7X-0003-SM-DJWWD B1 Blood Whole Blood 0013756 864 BP-63591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MA7X-0006-SM-CXZJ6 B1 8.9 Blood Whole Blood 0013756 864 BP-63592 RNA isolation_PAXgene Blood RNA (Manual) 05/18/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.953766 375281 0.989081 0.954902 0.811064 18401 1 76 0.00197743 262 0 1.49786e+08 0.00975868 204462 1.5686e+08 9.40098e+06 18409 7.45609e+07 0 0.178017 0.954902 0.774487 1.49786e+08 0.00290504 3.60415e+07 2.67818e+08 3.6485e+07 283 3.65547e+07 4.59568e+07 0.00244069 3.61576e+07 49.7269 0.00130347 0.956038 0 50.3057 GTEX-1MA7X-0011-R2b-SM-EZ6MT C1, B1, A1 6.5 Brain Brain - Substantia nigra 0002038 844 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989871 284218 0.969516 0.991475 0.863947 23234 1 76 0.0023692 284 0 1.09953e+08 0.0302855 1.18639e+07 1.10898e+08 8.67017e+06 23254 5.48025e+07 0 0.105569 0.991475 0.856582 1.09953e+08 0.00326075 2.41808e+07 2.0065e+07 2.47509e+07 321 2.44984e+07 9.54469e+06 0.00281426 2.45676e+07 50.0705 0.10698 0.993079 0 50.5825 GTEX-1MA7X-0011-R6a-SM-EYYWR C1, B1, A1 7.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 844 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986887 205292 0.964784 0.990074 0.855762 22251 1 76 0.00215749 151 0 5.90842e+07 0.0350091 4.65474e+06 5.96765e+07 2.48972e+06 22263 2.93701e+07 0 0.109021 0.990074 0.847268 5.90842e+07 0.00312129 1.28463e+07 7.64165e+06 1.30948e+07 193 1.29967e+07 5.28323e+06 0.00263784 1.30965e+07 50.1913 0.0779996 0.993262 0 50.479 GTEX-1MA7X-0011-R7b-SM-EYYWS C1, B1, A1 5.9 Brain Brain - Putamen (basal ganglia) 0001874 844 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986918 132274 0.976944 0.989441 0.866382 20266 1 76 0.00213129 267 0 7.45531e+07 0.0229392 1.03474e+07 7.53487e+07 2.79333e+06 20274 3.7107e+07 0 0.110562 0.989441 0.857233 7.45531e+07 0.00300397 1.6251e+07 2.07604e+07 1.66936e+07 317 1.63872e+07 4.67167e+06 0.00256652 1.66859e+07 50.4515 0.137327 0.991963 0 50.6717 GTEX-1MA7X-0626-SM-E9TJI 2 C1 2 pieces; moderately congested; scattered alveolar hemorrhages 5.5 Lung Lung 0008952 907 997 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.977078 346843 0.967545 0.978943 0.732189 22780 1 76 0.00224116 147 0 7.55901e+07 0.032206 476668 7.7216e+07 3.40751e+06 22814 3.75817e+07 0 0.235356 0.978943 0.716772 7.55901e+07 0.00308696 1.65359e+07 8.59822e+06 1.66927e+07 169 1.665e+07 1.08138e+07 0.00266326 1.67183e+07 50.1024 0.00617318 0.980809 0 50.2359 GTEX-1MA7X-0726-SM-EV7AB 1 C1 6 pieces; half of the specimens have high mucosal glycogen content; 6.3 Esophagus Esophagus - Mucosa 0006920 914 990 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.984073 272243 0.974273 0.985384 0.816964 22874 1 76 0.00248113 267 0 9.60419e+07 0.0254826 2.01195e+06 9.74665e+07 1.09645e+07 22894 4.78285e+07 0 0.157308 0.985384 0.805024 9.60419e+07 0.00430491 2.14835e+07 1.12831e+07 2.16592e+07 329 2.15822e+07 1.33115e+07 0.0033918 2.16849e+07 50.1186 0.0206425 0.986696 0 50.2037 GTEX-1MA7X-0826-SM-DIPGC 2 C1 6 pieces; well dissected 5.6 Esophagus Esophagus - Muscularis 0004648 914 990 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992391 265743 0.972449 0.993712 0.814352 23971 1 76 0.00223014 370 0 1.08879e+08 0.0273969 4.88064e+06 1.09568e+08 8.82817e+06 24002 5.42475e+07 0 0.158097 0.993712 0.809231 1.08879e+08 0.00344743 2.39573e+07 1.30587e+07 2.44457e+07 383 2.43323e+07 1.07299e+07 0.00283798 2.41961e+07 49.8597 0.0445443 0.995032 0 50.5045 GTEX-1MA7X-0926-SM-DIPEJ 2 C1 2 pieces; 1 focal lymphoid collection [1.7mm] on edge 6.6 Thyroid Thyroid 0002046 916 988 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.991738 386583 0.96756 0.992813 0.722294 25752 1 76 0.00255613 209 0 9.69839e+07 0.0318104 477139 9.76859e+07 7.57094e+06 25804 4.82936e+07 0 0.245266 0.992813 0.717103 9.69839e+07 0.00334799 2.13948e+07 1.07151e+07 2.14212e+07 221 2.14772e+07 1.4538e+07 0.00295163 2.14422e+07 49.9592 0.00488442 0.993889 0 50.0308 GTEX-1MA7X-1026-SM-DKPQ8 1 C1 2 pieces; fibrous content <2% 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 919 985 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.99014 259482 0.968431 0.99226 0.773274 23659 1 76 0.00290793 161 0 7.64322e+07 0.0312775 437457 7.70284e+07 7.90318e+06 23686 3.80393e+07 0 0.195157 0.99226 0.767289 7.64322e+07 0.00332543 1.66931e+07 1.17948e+07 1.69081e+07 176 1.69287e+07 1.19272e+07 0.00311624 1.68316e+07 49.8562 0.00567916 0.99438 0 50.3199 GTEX-1MA7X-1526-SM-DHXJF 2 C1 2 pieces; spermatogenesis present 6.5 Testis Testis 0000473 948 956 BP-78245 RNA Extraction from Paxgene-derived Lysate Plate Based 09/07/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.991697 583413 0.926689 0.992546 0.702619 34778 1 76 0.00243255 286 0 1.12258e+08 0.0730062 1.18588e+06 1.13101e+08 6.40249e+06 34863 5.59364e+07 0 0.22407 0.992546 0.697381 1.12258e+08 0.00274481 2.31744e+07 1.50436e+07 2.3416e+07 278 2.34578e+07 1.69762e+07 0.00258854 2.32121e+07 49.7368 0.0104852 0.993395 0 50.2593 GTEX-1MA7X-1626-SM-E9U5B 1 C1 2 pieces; 90% adipose; a 2mm fibrous focus with several mammary ducts 5.5 Breast Breast - Mammary Tissue 0008367 951 953 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985227 204660 0.973985 0.986028 0.773388 22910 1 76 0.00188724 161 0 7.16502e+07 0.0257423 655875 7.26654e+07 2.99448e+06 22940 3.57076e+07 0 0.200596 0.986028 0.762583 7.16502e+07 0.00269158 1.58153e+07 7.34188e+06 1.59197e+07 180 1.58733e+07 1.02214e+07 0.00228908 1.59174e+07 50.0694 0.00902595 0.98683 0 50.1646 GTEX-1MA7X-2126-SM-E6CIX 2 C1 2 pieces; 5% fibrous content 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 975 929 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992953 455183 0.97732 0.994189 0.811739 24813 1 76 0.0018849 293 0 1.17642e+08 0.0222964 292154 1.1833e+08 7.49519e+06 24849 5.85881e+07 0 0.165581 0.994189 0.807022 1.17642e+08 0.00243819 2.59539e+07 9.20514e+06 2.61781e+07 326 2.61118e+07 2.27397e+07 0.0021612 2.61488e+07 50.0353 0.00246898 0.995425 0 50.215 GTEX-1MA7X-2226-SM-E6CIY 1 C1 6 pieces; well dissected; 5% dermal fat 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 976 928 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993017 382131 0.974009 0.994203 0.79066 24825 1 76 0.00196951 214 0 8.79188e+07 0.0257242 327861 8.84315e+07 5.78902e+06 24862 4.37883e+07 0 0.183349 0.994203 0.786076 8.79188e+07 0.00244357 1.93117e+07 7.53083e+06 1.9433e+07 208 1.93618e+07 1.64362e+07 0.00220626 1.94744e+07 50.145 0.00370751 0.995388 0 50.1566 GTEX-1MA7X-2326-SM-EV7AA 1 C1 1 piece; posterior [labeled] and anterior lobes present 5.9 Pituitary Pituitary 0000007 1014 890 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.987069 347733 0.961203 0.98836 0.757514 26480 1 76 0.00251377 371 0 1.01248e+08 0.0386113 2.20765e+06 1.0244e+08 1.15412e+07 26526 5.04273e+07 0 0.203689 0.98836 0.748696 1.01248e+08 0.00394196 2.15585e+07 1.27565e+07 2.19216e+07 335 2.18341e+07 1.14034e+07 0.00322693 2.17673e+07 49.9234 0.0215507 0.989651 0 50.4175 GTEX-1MCC2-0004-SM-DE1JS B1 Blood Whole Blood 0013756 -149 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MCC2-0004-SM-DJWWS B1 Blood Whole Blood 0013756 -149 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MCC2-0006-SM-DKPPJ B1 8.6 Blood Whole Blood 0013756 -149 BP-63812 RNA isolation_PAXgene Blood RNA (Manual) 05/22/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.975983 713206 0.975707 0.978114 0.824846 18834 1 76 0.00301383 270 0 1.34372e+08 0.0231342 279462 1.37378e+08 1.37042e+07 18843 6.67975e+07 0 0.150862 0.978114 0.806793 1.34372e+08 0.00361477 3.10261e+07 1.5547e+08 3.12416e+07 297 3.13529e+07 3.529e+07 0.00331364 3.11931e+07 49.8723 0.00203425 0.980246 0 50.1731 GTEX-1MCC2-0226-SM-EVYD5 0 B1 2 pieces; ~15% internal fat 8.1 Heart Heart - Atrial Appendage 0006631 151 651 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994354 331001 0.977039 0.994927 0.861477 21282 1 76 0.00198696 268 0 9.52026e+07 0.0226406 2.04757e+06 9.56881e+07 4.06582e+06 21297 4.74724e+07 0 0.115563 0.994927 0.857107 9.52026e+07 0.00285551 2.02842e+07 1.00844e+07 2.06425e+07 292 2.04714e+07 1.69059e+07 0.00242098 2.04977e+07 50.0321 0.0213983 0.9955 0 50.4377 GTEX-1MCC2-0326-SM-EV7AK 1 B1 3 pieces; 8.9 Heart Heart - Left Ventricle 0006566 161 641 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.993053 382509 0.983644 0.993998 0.85227 22621 1 76 0.00252707 276 0 1.44337e+08 0.0160953 5.32806e+06 1.45209e+08 1.43391e+07 22644 7.19599e+07 0 0.131374 0.993998 0.847155 1.44337e+08 0.00364755 3.13543e+07 3.24279e+07 3.17636e+07 328 3.15407e+07 2.31745e+07 0.00308678 3.16812e+07 50.1111 0.0366925 0.994944 0 50.3242 GTEX-1MCC2-0426-SM-DKPQH 0 B1 6 pieces; up to 0.5mm attached adventitia; 7.6 Blood Vessel Artery - Aorta 0001496 171 631 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991926 293652 0.977402 0.994088 0.856828 22074 1 76 0.00272372 277 0 9.67682e+07 0.0222039 399503 9.73436e+07 1.0058e+07 22093 4.81869e+07 0 0.120574 0.994088 0.851763 9.67682e+07 0.00326009 2.09498e+07 8.027e+06 2.11653e+07 276 2.12023e+07 1.97743e+07 0.00299132 2.11066e+07 49.887 0.00410405 0.99625 0 50.2559 GTEX-1MCC2-0526-SM-DHXJS 1 B1 2 pieces; one piece with attached fibro adipose tissue (outlined); 7.6 Thyroid Thyroid 0002046 173 629 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992152 538738 0.970061 0.993117 0.786952 24932 1 76 0.00234256 277 0 1.11972e+08 0.0295919 227933 1.12748e+08 6.17762e+06 24977 5.58032e+07 0 0.183108 0.993117 0.781536 1.11972e+08 0.00289598 2.45642e+07 1.06571e+07 2.48508e+07 300 2.48476e+07 2.10002e+07 0.002619 2.46663e+07 49.817 0.00202161 0.994082 0 50.29 GTEX-1MCC2-0626-SM-DKPQI 1 B1 2 pieces; lobulated mature adipose tissue with septal fibrovascular component and one tinyl aggregate of mesothelial cells with lymphocytes (outlined) 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 179 623 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991633 286375 0.978116 0.993906 0.836498 22640 1 76 0.00289114 271 0 9.15197e+07 0.0215731 1.27938e+06 9.20809e+07 9.44552e+06 22664 4.55604e+07 0 0.141618 0.993906 0.8314 9.15197e+07 0.00357885 2.0117e+07 8.11965e+06 2.04352e+07 261 2.04137e+07 1.43809e+07 0.00323421 2.03303e+07 49.8976 0.0138941 0.996178 0 50.3924 GTEX-1MCC2-0726-SM-EV7AL 1 B1 2 pieces; collapsed alveoli (atelectasis)and enlarged alveolar spaces (ruptured alveoli); prominent vasculature; bronchioles filled with slought epithelia; congestion 8 Lung Lung 0008952 182 620 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990292 362616 0.969297 0.991366 0.786302 26945 1 76 0.00271128 281 0 1.16985e+08 0.0300645 809509 1.18004e+08 1.27853e+07 26989 5.82663e+07 0 0.182994 0.991366 0.779513 1.16985e+08 0.00386743 2.57811e+07 1.08716e+07 2.60574e+07 321 2.59894e+07 1.94723e+07 0.00328872 2.59648e+07 49.9763 0.00686001 0.99244 0 50.2665 GTEX-1MCC2-0826-SM-EV7AM 1 B1 2 pieces; 5.9 Spleen Spleen 0002106 192 610 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983233 252614 0.961553 0.984273 0.774476 24923 1 76 0.0035395 203 0 9.33859e+07 0.0363303 1.20014e+06 9.4878e+07 1.11304e+07 24967 4.64083e+07 0 0.187077 0.984273 0.762296 9.33859e+07 0.00468224 2.05425e+07 1.65764e+07 2.07345e+07 253 2.06757e+07 1.24586e+07 0.00411027 2.06917e+07 50.0193 0.0126493 0.985313 0 50.2326 GTEX-1MCC2-1026-SM-EVR5I 1 B1 3 pieces; ovarian cortex with corpora albicans and luteum and rare follicles (rep outlined) 6.7 Ovary Ovary 0000992 209 593 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988271 169832 0.978116 0.990238 0.849177 21988 1 76 0.00213343 174 0 7.86362e+07 0.0215962 337055 7.94114e+07 6.21542e+06 22009 3.91465e+07 0 0.128939 0.990238 0.840887 7.86362e+07 0.00352161 1.73633e+07 7.69607e+06 1.75724e+07 199 1.75079e+07 1.54703e+07 0.00282614 1.75707e+07 50.0895 0.00424441 0.992206 0 50.2993 GTEX-1MCC2-1126-SM-EVYD6 1 B1 6 pieces; two pieces contain surface squamous epithelium (outlined); fibromuscular stroma with vessels, nerves and two small aggregates of ganglion cells (arrows) 6.4 Vagina Vagina 0000996 215 587 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.988317 363966 0.974135 0.988917 0.830317 25059 1 76 0.00215275 386 0 1.28616e+08 0.0255024 816613 1.30057e+08 6.72817e+06 25095 6.40804e+07 0 0.143817 0.988917 0.821115 1.28616e+08 0.00274714 2.81747e+07 1.131e+07 2.85256e+07 396 2.83648e+07 2.25611e+07 0.00244976 2.84137e+07 50.043 0.00627888 0.989517 0 50.3094 GTEX-1MCC2-1626-SM-DIPEW 2 B1 6 pieces; mildly to moderately autolyzed target mucosa and well preserved target muscularis 7.1 Colon Colon - Transverse 0001157 275 527 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.993405 430439 0.978685 0.994764 0.848911 23677 1 76 0.00228876 383 0 1.03917e+08 0.0209354 1.23008e+06 1.04464e+08 8.22524e+06 23699 5.1777e+07 0 0.129774 0.994764 0.844466 1.03917e+08 0.00319563 2.27612e+07 9.3135e+06 2.2986e+07 339 2.2981e+07 1.87201e+07 0.00274158 2.28947e+07 49.9059 0.0117751 0.996122 0 50.2457 GTEX-1MCC2-1826-SM-DIPEX 2 B1 6 pieces; 5% to 20% external and internal/periadnexal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 241 561 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99323 477643 0.970269 0.994468 0.784408 23820 1 76 0.00233458 235 0 9.56172e+07 0.0295007 517126 9.61491e+07 7.00226e+06 23858 4.76511e+07 0 0.185862 0.994468 0.780068 9.56172e+07 0.00332936 2.09434e+07 1.3091e+07 2.10836e+07 249 2.11005e+07 1.60257e+07 0.00283135 2.10436e+07 49.9326 0.00537838 0.995706 0 50.1669 GTEX-1MCC2-1926-SM-DHXJR 1 B1 6 pieces; three pieces contain target squamous epithelium measuring ~ 0.3mm in thickness; focal superficial desquamation; well preserved muscularis 9.3 Esophagus Esophagus - Mucosa 0006920 258 544 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992615 640729 0.979284 0.993403 0.8406 22649 1 76 0.00255982 282 0 1.1579e+08 0.0202718 642839 1.16559e+08 6.57818e+06 22671 5.76975e+07 0 0.138684 0.993403 0.835055 1.1579e+08 0.00278826 2.61103e+07 1.71159e+07 2.64068e+07 318 2.64229e+07 2.40734e+07 0.00267395 2.61805e+07 49.7696 0.00551512 0.994191 0 50.2823 GTEX-1MCC2-2026-SM-EVR5J 1 B1 6 pieces; target muscularis with attached rim of serosa 8 Esophagus Esophagus - Muscularis 0004648 261 541 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.9889 196166 0.980133 0.99073 0.877464 21393 1 76 0.00218193 213 0 8.24934e+07 0.0195208 909148 8.32653e+07 6.43644e+06 21405 4.10699e+07 0 0.102668 0.99073 0.869329 8.24934e+07 0.00335211 1.76421e+07 6.06441e+06 1.78735e+07 235 1.77964e+07 1.63438e+07 0.00276594 1.78523e+07 50.0784 0.0109187 0.992559 0 50.3258 GTEX-1MCC2-2126-SM-EWRON 1 B1 2 pieces; fibroadipose tissue and ductal structures embedded in dense hyalinized stroma 7.4 Breast Breast - Mammary Tissue 0008367 271 531 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986506 290051 0.974914 0.989652 0.824543 24045 1 76 0.00247349 217 0 8.70242e+07 0.0246412 391762 8.79341e+07 6.1379e+06 24072 4.32627e+07 0 0.15037 0.989652 0.816012 8.70242e+07 0.00341923 1.90145e+07 7.84399e+06 1.92657e+07 209 1.92798e+07 1.65846e+07 0.00293381 1.9246e+07 49.9561 0.00445518 0.992799 0 50.328 GTEX-1MCC2-2226-SM-EV7AJ 1 B1 3 pieces; 95%, 50% and 25% of glandular and ductal elements of mucous gland and attached fibroadipose tissue and skeletal muscle fibers respectively 8.7 Salivary Gland Minor Salivary Gland 0006330 281 521 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990159 548304 0.972728 0.991462 0.820748 25790 1 76 0.00265349 398 0 1.32337e+08 0.026359 642728 1.33477e+08 1.42955e+07 25824 6.5893e+07 0 0.15198 0.991462 0.81374 1.32337e+08 0.00423492 2.97361e+07 2.79724e+07 3.00057e+07 333 3.0029e+07 2.52361e+07 0.00344316 2.9879e+07 49.8748 0.00481528 0.992765 0 50.2256 GTEX-1MCC2-2326-SM-E9U5G 1 B1 2 pieces; mature adipose tissue with fibrovascular septa 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 361 441 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742,LCSET-10947 05/01/2017 TruSeq.v1 RNASEQ 0.981043 268911 0.970871 0.982827 0.793796 21661 1 76 0.00200468 169 0 7.18978e+07 0.0288493 578544 7.31541e+07 6.89129e+06 21692 3.57495e+07 0 0.177075 0.982827 0.780165 7.18978e+07 0.00337229 1.57801e+07 8.78548e+06 1.59043e+07 178 1.58825e+07 1.14023e+07 0.00268724 1.5929e+07 50.0732 0.00790857 0.984612 0 50.1959 GTEX-1MCC2-2426-SM-E6CJ4 1 B1 2 pieces; one with trace of adherent fat (arrows) 7.1 Nerve Nerve - Tibial 0001323 368 434 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.989675 185109 0.967373 0.990583 0.776255 25231 1 76 0.00210181 304 0 1.30378e+08 0.0322776 595909 1.31618e+08 8.09736e+06 25287 6.49487e+07 0 0.191119 0.990583 0.768945 1.30378e+08 0.00256549 2.84663e+07 1.1452e+07 2.87411e+07 315 2.8533e+07 2.34268e+07 0.00233344 2.87808e+07 50.2162 0.00452758 0.991492 0 50.2402 GTEX-1MCC2-2726-SM-EWRN3 1 B1 2 pieces; ~15% internal fat 8.6 Muscle Muscle - Skeletal 0011907 386 416 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.990077 235967 0.98384 0.992992 0.895398 18654 1 76 0.0023061 172 0 7.08189e+07 0.0159174 1.06838e+06 7.13187e+07 5.02108e+06 18657 3.52526e+07 0 0.0884422 0.992992 0.889123 7.08189e+07 0.00294742 1.55322e+07 6.95598e+06 1.56881e+07 175 1.57044e+07 1.52756e+07 0.00261832 1.56839e+07 49.9674 0.0149804 0.995907 0 50.2497 GTEX-1MCC2-5017-SM-AN49G B1 Muscle Muscle - Skeletal 0011907 388 ChIP-Seq GTEX-1MCQQ-0002-SM-DE1K2 B1 Blood Whole Blood 0013756 1202 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MCQQ-0002-SM-DJWXD B1 Blood Whole Blood 0013756 1202 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MCQQ-0005-SM-DKPPV B1 7.6 Blood Whole Blood 0013756 1202 BP-63812 RNA isolation_PAXgene Blood RNA (Manual) 05/22/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.944383 372401 0.987594 0.94667 0.817622 17929 1 76 0.0023346 192 0 1.27476e+08 0.0112043 418506 1.34657e+08 1.33417e+07 17935 6.33435e+07 0 0.169972 0.94667 0.774018 1.27476e+08 0.00332406 3.0458e+07 2.58578e+08 3.07506e+07 224 3.08481e+07 3.76144e+07 0.00282814 3.06631e+07 49.8496 0.00310794 0.948956 0 50.239 GTEX-1MCQQ-0011-R3a-SM-EXURW C1, B1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1184 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989156 462136 0.971754 0.990615 0.875978 21125 1 76 0.00158163 180 0 5.79111e+07 0.027974 5.61724e+06 5.84597e+07 1.60414e+06 21136 2.88182e+07 0 0.0957758 0.990615 0.867757 5.79111e+07 0.00216706 1.28218e+07 8.99171e+06 1.31168e+07 209 1.30312e+07 5.32755e+06 0.00187391 1.29721e+07 49.8862 0.0960874 0.992075 0 50.5687 GTEX-1MCQQ-0626-SM-E9U5Q 1 C1 2 pieces; minimal internal fat 8.4 Muscle Muscle - Skeletal 0011907 1275 1176 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992049 626930 0.969239 0.993003 0.84525 20988 1 76 0.00144981 199 0 9.3206e+07 0.0305045 953402 9.38628e+07 3.20468e+06 21006 4.64731e+07 0 0.123989 0.993003 0.839336 9.3206e+07 0.0023097 1.98611e+07 1.76337e+07 2.00959e+07 250 2.00584e+07 1.94403e+07 0.00187934 1.99818e+07 49.9044 0.0101574 0.993957 0 50.2938 GTEX-1MCQQ-0826-SM-DLHC2 1 C1 6 pieces; well trimmed; 5% dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1283 1168 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.988945 475169 0.97061 0.992228 0.801849 24475 1 76 0.00236256 236 0 9.37881e+07 0.0291375 638254 9.45228e+07 7.55078e+06 24511 4.66026e+07 0 0.168761 0.992228 0.795617 9.37881e+07 0.00320817 2.03781e+07 1.14613e+07 2.05539e+07 236 2.0608e+07 1.65804e+07 0.00278397 2.06059e+07 49.9975 0.00675238 0.99551 0 50.2148 GTEX-1MCQQ-1026-SM-EV7AX 1 C1 6 pieces; focal chronic esophagitis; partial epithelial sloughing; well dissected mucosa 5.5 Esophagus Esophagus - Mucosa 0006920 1293 1158 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.971282 137652 0.980013 0.97249 0.852947 20688 1 76 0.00240174 369 0 9.28575e+07 0.0198421 2.24348e+06 9.54843e+07 1.05953e+07 20704 4.62492e+07 0 0.127066 0.97249 0.829482 9.28575e+07 0.00391278 2.10744e+07 1.08231e+07 2.15064e+07 336 2.13484e+07 9.43636e+06 0.00315632 2.13319e+07 49.9807 0.0234958 0.973697 0 50.5073 GTEX-1MCQQ-1426-SM-E6CJA 1 C1 1 piece; <1% fibrous content 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1309 1142 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.990441 218790 0.97688 0.991844 0.800011 23955 1 76 0.00202919 218 0 8.9538e+07 0.0227473 292176 9.02742e+07 5.68392e+06 23991 4.45724e+07 0 0.176869 0.991844 0.793486 8.9538e+07 0.00274818 1.96619e+07 9.03098e+06 1.9894e+07 236 1.98001e+07 1.62815e+07 0.00238817 1.98693e+07 50.0873 0.00323654 0.993248 0 50.2933 GTEX-1MCQQ-2226-SM-DLHC4 1 C1 2 pieces; 20% internal fat; well dissected 7.8 Salivary Gland Minor Salivary Gland 0006330 1330 1121 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.989467 587138 0.973959 0.992451 0.794069 25135 1 76 0.00250798 307 0 1.13809e+08 0.0253909 366299 1.14675e+08 8.34796e+06 25174 5.65625e+07 0 0.179889 0.992451 0.788075 1.13809e+08 0.00303413 2.56525e+07 1.90629e+07 2.58443e+07 325 2.59831e+07 2.09049e+07 0.00277026 2.58262e+07 49.8486 0.00319424 0.995435 0 50.1862 GTEX-1MCQQ-2326-SM-DLHBX 1 C1 2 pieces; active spermatogenesis 6 Testis Testis 0000473 1331 1120 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.98838 754505 0.916586 0.990916 0.708353 34938 1 76 0.00262081 291 0 1.2034e+08 0.0830513 1.09818e+06 1.21444e+08 1.03007e+07 35026 5.98504e+07 0 0.208233 0.990916 0.701918 1.2034e+08 0.00271712 2.44349e+07 1.95423e+07 2.4621e+07 288 2.4797e+07 1.93332e+07 0.00266884 2.45159e+07 49.715 0.00904272 0.993452 0 50.1897 GTEX-1MCQQ-2426-SM-DLHBZ 1 C1 1 piece; all anterior lobe 7.1 Pituitary Pituitary 0000007 1385 1066 BP-78279 RNA Extraction from Paxgene-derived Lysate Plate Based 09/08/2016 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.987521 447371 0.962263 0.990296 0.739931 26122 1 76 0.00276342 198 0 8.97790e+07 0.0375058 658768 9.06588e+07 8.11199e+06 26172 4.46213e+07 0 0.222332 0.990296 0.732751 8.97790e+07 0.00296717 1.9272e+07 1.03015e+07 1.95303e+07 210 1.96033e+07 1.25866e+07 0.00286501 1.94292e+07 49.7771 0.00726646 0.993072 0 50.3329 GTEX-1MCQQ-2526-SM-E9TJZ 1 C1 2 pieces; 1 has more neurons than the other 5.6 Brain Brain - Cortex 0001870 1390 1061 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 EXCLUDE 0.971036 167674 0.96361 0.973111 0.807013 21887 1 76 0.00210008 174 0 6.3513e+07 0.0361545 3.36283e+06 6.5268e+07 3.03842e+06 21906 3.15831e+07 0 0.156597 0.973111 0.785313 6.3513e+07 0.00293906 1.39661e+07 6.16092e+06 1.43503e+07 177 1.40995e+07 7.62917e+06 0.00251868 1.43387e+07 50.4207 0.0515234 0.975186 0 50.6783 GTEX-1MCYP-0003-SM-DE1KP B1 Blood Whole Blood 0013756 36 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MCYP-0003-SM-DJWXA B1 Blood Whole Blood 0013756 36 BP-63806 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/22/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MCYP-0005-SM-DKPPK B1 8.6 Blood Whole Blood 0013756 36 BP-63812 RNA isolation_PAXgene Blood RNA (Manual) 05/22/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989258 592241 0.966425 0.991038 0.813073 19060 1 76 0.00281365 273 0 1.10034e+08 0.0329902 625382 1.11029e+08 1.09519e+07 19075 5.47947e+07 0 0.153352 0.991038 0.805786 1.10034e+08 0.00291415 2.47205e+07 8.65481e+07 2.50075e+07 264 2.50859e+07 2.48981e+07 0.00286381 2.48389e+07 49.7527 0.0056326 0.992819 0 50.2886 GTEX-1MCYP-0126-SM-E6CIS 0 B1 2 pieces; fibrocollagenous stroma with scattered ducts/TDLUs 8.1 Breast Breast - Mammary Tissue 0008367 92 489 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993753 346065 0.973398 0.994909 0.801564 24401 1 76 0.00181485 216 0 8.63245e+07 0.0262018 187372 8.67662e+07 5.54377e+06 24437 4.29931e+07 0 0.171834 0.994909 0.797483 8.63245e+07 0.00231045 1.9009e+07 6.77737e+06 1.91228e+07 205 1.90611e+07 1.72546e+07 0.00206236 1.91583e+07 50.1271 0.0021595 0.996064 0 50.1492 GTEX-1MCYP-0226-SM-EV7A3 1 B1 2 pieces 7.5 Spleen Spleen 0002106 94 487 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990784 182088 0.96721 0.991764 0.780497 23918 1 76 0.00250149 161 0 7.65374e+07 0.0323094 580598 7.7173e+07 8.76622e+06 23949 3.81404e+07 0 0.186713 0.991764 0.774069 7.65374e+07 0.00363331 1.68466e+07 7.64178e+06 1.69872e+07 184 1.69362e+07 1.17895e+07 0.00306684 1.69649e+07 50.0424 0.00752333 0.992744 0 50.2079 GTEX-1MCYP-0426-SM-E6CIQ 1 B1 6 pieces 7.9 Blood Vessel Artery - Aorta 0001496 99 482 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99444 241585 0.980646 0.995439 0.862003 22103 1 76 0.00166951 283 0 1.00216e+08 0.0187565 367375 1.00676e+08 6.02629e+06 22128 4.99241e+07 0 0.118643 0.995439 0.858071 1.00216e+08 0.00225952 2.17226e+07 6.46681e+06 2.19225e+07 307 2.18305e+07 2.17101e+07 0.00196422 2.19004e+07 50.0799 0.0036491 0.996437 0 50.2291 GTEX-1MCYP-0526-SM-E9U6Q 1 B1 6 pieces; includes up to ~5-10% attached/internal fat, hair bearing sklin 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 102 479 BP-83440 RNA Extraction from Paxgene-derived Lysate Plate Based 02/22/2017 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985244 444310 0.963505 0.986051 0.763218 22002 1 76 0.00163399 169 0 7.11265e+07 0.0363602 1.37472e+06 7.21327e+07 3.30785e+06 22029 3.54586e+07 0 0.200286 0.986051 0.752572 7.11265e+07 0.00249331 1.56485e+07 1.34073e+07 1.58035e+07 185 1.57187e+07 9.20846e+06 0.0020633 1.58001e+07 50.1291 0.0190582 0.986858 0 50.2464 GTEX-1MCYP-1026-SM-DPRYB 0 B1 6 pieces 9 Esophagus Esophagus - Mucosa 0006920 118 463 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.99482 237416 0.979751 0.995458 0.861398 20436 1 76 0.00183413 153 0 6.08749e+07 0.0199297 326949 6.11527e+07 3.41153e+06 20446 3.03494e+07 0 0.118353 0.995458 0.857486 6.08749e+07 0.0023437 1.37016e+07 7.27106e+06 1.37875e+07 145 1.37687e+07 1.35594e+07 0.00208875 1.37558e+07 49.9767 0.00534644 0.996096 0 50.1562 GTEX-1MCYP-1126-SM-E9J2P 1 B1 6 pieces; full thickness sections, well preserved, foveolar surface partly sloughed 5.9 Stomach Stomach 0000945 124 457 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.980638 289830 0.975404 0.981474 0.835515 23154 1 76 0.00163199 279 0 8.95878e+07 0.0244125 1.15931e+06 9.12788e+07 4.65384e+06 23174 4.46498e+07 0 0.13989 0.981474 0.820036 8.95878e+07 0.00246879 1.96342e+07 7.68364e+06 1.99362e+07 283 1.97226e+07 1.40764e+07 0.00205004 1.99241e+07 50.254 0.0127007 0.982309 0 50.3816 GTEX-1MCYP-1226-SM-DTX8H 0 B1 2 pieces; myometrium and ~10% endometrium 8.2 Uterus Uterus 0000995 124 457 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992311 747622 0.977151 0.994283 0.862834 22008 1 76 0.0017058 171 0 7.65364e+07 0.0224462 142982 7.69765e+07 3.61428e+06 22027 3.80728e+07 0 0.114317 0.994283 0.857901 7.65364e+07 0.00220617 1.67326e+07 5.43775e+06 1.6792e+07 181 1.69134e+07 1.66936e+07 0.00195549 1.67545e+07 49.764 0.00185748 0.996254 0 50.0886 GTEX-1MCYP-1326-SM-EV7AD 0 B1 6 pieces; all have epithelium 9 Vagina Vagina 0000996 126 455 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989923 410729 0.979128 0.991122 0.844763 22571 1 76 0.00223603 281 0 9.80585e+07 0.0206098 297918 9.89369e+07 1.10116e+07 22592 4.88567e+07 0 0.134365 0.991122 0.837264 9.80585e+07 0.00376468 2.20269e+07 1.29247e+07 2.21802e+07 271 2.2197e+07 2.08621e+07 0.00299943 2.21275e+07 49.9216 0.00301119 0.992322 0 50.1733 GTEX-1MCYP-1826-SM-E9J2Q 0 B1 2 pieces; central defects, mature fat 8 Adipose Tissue Adipose - Subcutaneous 0002190 210 371 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.989607 402549 0.9792 0.990439 0.851469 21758 1 76 0.00161438 216 0 8.3576e+07 0.020464 503970 8.43828e+07 3.87327e+06 21776 4.16607e+07 0 0.127731 0.990439 0.843329 8.3576e+07 0.00243676 1.82635e+07 7.51058e+06 1.851e+07 220 1.84211e+07 1.63459e+07 0.00202522 1.84216e+07 50.0007 0.00597243 0.991272 0 50.3351 GTEX-1MCYP-1926-SM-E9J2R 0 B1 6 pieces; includes 10-20% attached and internal fat, epidermis measures 42 microns 6 Skin Skin - Sun Exposed (Lower leg) 0004264 212 369 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.972233 347585 0.970765 0.973219 0.808844 23923 1 76 0.00179845 282 0 9.13183e+07 0.0290367 1.01023e+06 9.38312e+07 4.85799e+06 23951 4.54721e+07 0 0.161921 0.973219 0.787182 9.13183e+07 0.00277002 2.00398e+07 9.40810e+06 2.03309e+07 283 2.01393e+07 1.29391e+07 0.00228374 2.03223e+07 50.2261 0.0107664 0.974205 0 50.3605 GTEX-1MCYP-2026-SM-DTXE4 0 B1 2 pieces 7.9 Muscle Muscle - Skeletal 0011907 216 365 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994709 802191 0.985338 0.995663 0.889464 19816 1 76 0.00161654 386 0 1.10853e+08 0.0144319 1.65893e+06 1.11336e+08 4.88317e+06 19824 5.52475e+07 0 0.0958748 0.995663 0.885606 1.10853e+08 0.00187927 2.43162e+07 1.32148e+07 2.4622e+07 351 2.47208e+07 2.28319e+07 0.00174778 2.4309e+07 49.5801 0.0149002 0.996617 0 50.3125 GTEX-1MCYP-2126-SM-E9J2S 0 B1 3 pieces; well trimmed 6.9 Nerve Nerve - Tibial 0001323 218 363 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.98222 350626 0.971128 0.982976 0.790254 23049 1 76 0.00177775 213 0 8.02431e+07 0.0285605 378852 8.16329e+07 3.97348e+06 23084 3.99748e+07 0 0.180874 0.982976 0.7768 8.02431e+07 0.0024726 1.77064e+07 7.49971e+06 1.78775e+07 204 1.77704e+07 1.34433e+07 0.00212491 1.78796e+07 50.1531 0.00464092 0.983731 0 50.2405 GTEX-1MGNQ-0001-SM-DE1IL B1 Blood Whole Blood 0013756 -47 BP-63872 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/26/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MGNQ-0001-SM-DJWXI B1 Blood Whole Blood 0013756 -47 BP-63872 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/26/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MGNQ-0005-SM-CXZJ1 B1 9.4 Blood Whole Blood 0013756 -47 BP-63870 RNA isolation_PAXgene Blood RNA (Manual) 05/26/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990713 1.35774e+06 0.959043 0.992073 0.807668 19797 1 76 0.0024237 272 0 1.25498e+08 0.040255 441391 1.265e+08 7.90756e+06 19812 6.25133e+07 0 0.151375 0.992073 0.801266 1.25498e+08 0.00319401 2.78402e+07 9.75338e+07 2.8267e+07 320 2.83228e+07 2.87119e+07 0.00280832 2.79747e+07 49.6909 0.00348925 0.993434 0 50.3803 GTEX-1MGNQ-0126-SM-EVYCJ 0 C1 6 pieces, adherent fat nubbins up to ~4mm; squamous epithelium is ~40-50 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 237 1274 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988917 583028 0.954264 0.989352 0.774486 23775 1 76 0.00191168 219 0 8.04518e+07 0.0454987 847371 8.13177e+07 3.3215e+06 23802 4.01257e+07 0 0.179778 0.989352 0.766239 8.04518e+07 0.00282358 1.72426e+07 2.1205e+07 1.7449e+07 212 1.7375e+07 1.27435e+07 0.00236743 1.73573e+07 49.9745 0.0104205 0.989787 0 50.2974 GTEX-1MGNQ-0226-SM-EVYCK 0 C1 2 pieces, fascia/vascular elements ~10% of tissue, rep. delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 240 1271 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990958 259572 0.975123 0.991609 0.803587 22739 1 76 0.00192058 206 0 8.36892e+07 0.0245754 437261 8.43974e+07 3.63818e+06 22769 4.17114e+07 0 0.171536 0.991609 0.796844 8.36892e+07 0.00312666 1.83212e+07 6.77174e+06 1.84966e+07 211 1.842e+07 1.43874e+07 0.00252322 1.84534e+07 50.0452 0.00518098 0.99226 0 50.2382 GTEX-1MGNQ-0526-SM-E9J2W 0 C1 2 pieces, no significant atherosis or adherent fat 8 Blood Vessel Artery - Tibial 0007610 247 1264 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.986666 195430 0.975348 0.98716 0.847696 20661 1 76 0.00172252 212 0 8.52775e+07 0.024244 371238 8.63866e+07 4.0827e+06 20676 4.25061e+07 0 0.127652 0.98716 0.836812 8.52775e+07 0.00230041 1.82922e+07 5.82369e+06 1.84573e+07 238 1.83353e+07 1.68803e+07 0.00201132 1.84622e+07 50.1725 0.0042974 0.987655 0 50.2246 GTEX-1MGNQ-0626-SM-E9J2X 0 C1 6 pieces; atherosis up to ~0.4mm; adherent fat to ~4mm 8.3 Blood Vessel Artery - Aorta 0001496 250 1261 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.992442 319731 0.978508 0.99325 0.85495 21352 1 76 0.00176272 176 0 7.62e+07 0.0210046 205425 7.67179e+07 3.67251e+06 21373 3.79729e+07 0 0.123558 0.99325 0.849179 7.62e+07 0.00254622 1.65763e+07 4.69527e+06 1.66944e+07 188 1.66366e+07 1.54521e+07 0.00215415 1.66971e+07 50.0907 0.00267767 0.994057 0 50.1774 GTEX-1MGNQ-0726-SM-DPRYH 0 C1 2 pieces, no abnormalities 6.9 Thyroid Thyroid 0002046 256 1255 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.99452 244627 0.969758 0.995328 0.78464 23165 1 76 0.00194314 134 0 6.47793e+07 0.0299228 219704 6.50834e+07 3.83775e+06 23197 3.22866e+07 0 0.185118 0.995328 0.780974 6.47793e+07 0.00264602 1.42011e+07 5.4547e+06 1.43508e+07 145 1.43316e+07 1.14613e+07 0.0022943 1.4268e+07 49.8887 0.00337573 0.996136 0 50.2621 GTEX-1MGNQ-0826-SM-EVR41 1 C1 2 pieces, mild congestion; moderate atelectasis; well-preserved intermediate bronchus, delineated 8.2 Lung Lung 0008952 258 1253 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989333 345288 0.974521 0.991501 0.796283 25322 1 76 0.00234623 279 0 1.22529e+08 0.0251459 437557 1.2358e+08 9.98888e+06 25368 6.09906e+07 0 0.178238 0.991501 0.789516 1.22529e+08 0.00349039 2.71946e+07 1.0072e+07 2.74794e+07 324 2.74591e+07 2.1379e+07 0.00291706 2.74617e+07 50.0024 0.00354069 0.993669 0 50.2605 GTEX-1MGNQ-1126-SM-EAZ4Y 1 C1 2 pieces, no abnormalities 6.4 Spleen Spleen 0002106 266 1245 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988759 360864 0.963807 0.989385 0.778684 25147 1 76 0.00267015 274 0 1.06615e+08 0.0349667 709389 1.07759e+08 8.87335e+06 25184 5.30765e+07 0 0.185123 0.989385 0.770418 1.06615e+08 0.00348082 2.34189e+07 1.37663e+07 2.35722e+07 329 2.35031e+07 1.57379e+07 0.00307523 2.3552e+07 50.0519 0.00658311 0.99001 0 50.1632 GTEX-1MGNQ-1226-SM-EV7BM 1 C1 2 pieces, rare but well-preserved Islets; rep delineated 7 Pancreas Pancreas 0001150 267 1244 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990437 232251 0.975395 0.991438 0.809662 22184 1 76 0.00249706 112 0 7.92875e+07 0.0243451 316526 7.99722e+07 8.43366e+06 22206 3.95092e+07 0 0.165733 0.991438 0.802729 7.92875e+07 0.00370171 1.81234e+07 1.89255e+07 1.83263e+07 128 1.82566e+07 2.11217e+07 0.00309878 1.82722e+07 50.0214 0.00395795 0.992439 0 50.2783 GTEX-1MGNQ-1626-SM-EAZ4Z 1 C1 6 pieces; squamous mucosa up to ~0.35mm, ~25% thickness. Rare mucus glands present; rep delineated 8.4 Esophagus Esophagus - Mucosa 0006920 284 1227 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.99213 497226 0.975313 0.992868 0.825082 23317 1 76 0.00210794 380 0 1.1874e+08 0.0244017 821761 1.19593e+08 9.89344e+06 23341 5.92049e+07 0 0.150231 0.992868 0.819198 1.1874e+08 0.00288616 2.65405e+07 1.6318e+07 2.67809e+07 336 2.67394e+07 2.30879e+07 0.00249676 2.66649e+07 49.9303 0.00687133 0.993606 0 50.2254 GTEX-1MGNQ-1726-SM-DTX8K 1 C1 6 pieces, confirmed target muscularis 8.4 Esophagus Esophagus - Muscularis 0004648 284 1227 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992901 847132 0.979823 0.994632 0.868482 21832 1 76 0.00176353 388 0 1.06453e+08 0.0198369 664161 1.07027e+08 4.74209e+06 21849 5.29778e+07 0 0.111341 0.994632 0.86382 1.06453e+08 0.00205525 2.29759e+07 7.44904e+06 2.29982e+07 350 2.31675e+07 2.18445e+07 0.00190914 2.29764e+07 49.793 0.00620555 0.996363 0 50.0243 GTEX-1MGNQ-1826-SM-DPRYI 1 C1 6 pieces, well-preserved mucosa up to ~1.4mm, ~80% of thickness 6.4 Stomach Stomach 0000945 288 1223 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992424 283201 0.977618 0.993437 0.823273 22162 1 76 0.00218168 189 0 7.16864e+07 0.0219921 1.11843e+06 7.21599e+07 3.98208e+06 22180 3.57088e+07 0 0.154345 0.993437 0.817871 7.16864e+07 0.00282205 1.6041e+07 2.01375e+07 1.63371e+07 194 1.62847e+07 1.10498e+07 0.00250154 1.61516e+07 49.7948 0.0154993 0.994451 0 50.4573 GTEX-1MGNQ-1926-SM-DTX8L 0 C1 2 pieces, ~99% glandular elements; good specimen 8.7 Salivary Gland Minor Salivary Gland 0006330 292 1219 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.987683 575061 0.972201 0.989613 0.802686 23000 1 76 0.00308855 134 0 6.20452e+07 0.0240992 161915 6.26965e+07 2.72104e+06 23019 3.0728e+07 0 0.169514 0.989613 0.794349 6.20452e+07 0.00345071 1.38289e+07 7.61633e+06 1.38002e+07 137 1.39907e+07 1.19285e+07 0.00326928 1.37496e+07 49.5654 0.00258252 0.991543 0 49.948 GTEX-1MGNQ-2026-SM-EAZ51 2 C1 6 pieces, surface mucosa moderately autolyzed, up to ~0.3mm 7.1 Colon Colon - Transverse 0001157 293 1218 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990593 523686 0.973512 0.991697 0.814123 24698 1 76 0.00235949 377 0 1.06126e+08 0.0256224 2.14297e+06 1.07015e+08 9.00132e+06 24736 5.28326e+07 0 0.159389 0.991697 0.807363 1.06126e+08 0.00338394 2.35205e+07 1.24842e+07 2.36748e+07 348 2.36494e+07 1.57586e+07 0.00287115 2.36527e+07 50.0036 0.020025 0.9928 0 50.1635 GTEX-1MGNQ-2126-SM-EV7AC 1 C1 6 pieces, confirmed target muscularis 7.8 Colon Colon - Sigmoid 0001159 295 1216 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991518 454100 0.976673 0.992578 0.840653 23671 1 76 0.00234426 293 0 1.19805e+08 0.0230055 1.10898e+06 1.20701e+08 1.34244e+07 23703 5.96951e+07 0 0.136019 0.992578 0.834414 1.19805e+08 0.00351402 2.60755e+07 1.03588e+07 2.63727e+07 328 2.63181e+07 2.18571e+07 0.00292852 2.62481e+07 49.9334 0.00918781 0.993637 0 50.2833 GTEX-1MGNQ-2226-SM-EV7A2 1 C1 2 pieces, hyperplastic glandular pattern 7.6 Prostate Prostate 0002367 298 1213 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988567 303423 0.968258 0.989919 0.75965 24372 1 76 0.00252918 123 0 6.06277e+07 0.0314772 283612 6.12452e+07 6.70885e+06 24406 3.0181e+07 0 0.208609 0.989919 0.751991 6.06277e+07 0.00411696 1.33208e+07 5.72715e+06 1.3442e+07 135 1.34378e+07 9.24261e+06 0.00332198 1.3406e+07 49.9408 0.00463076 0.99127 0 50.2264 GTEX-1MGNQ-2326-SM-EV7BG 1 C1 4 pieces, ~5-10% target lymphoid aggregates, rep delineated 6.9 Small Intestine Small Intestine - Terminal Ileum 0001211 305 1206 BP-83440 RNA Extraction from Paxgene-derived Lysate Plate Based 02/22/2017 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.985096 153578 0.964824 0.986067 0.814731 24788 1 76 0.00263181 277 0 8.70364e+07 0.0346392 576581 8.82662e+07 9.7414e+06 24819 4.3344e+07 0 0.150092 0.986067 0.803379 8.70364e+07 0.00383862 1.89607e+07 9.20391e+06 1.91913e+07 258 1.90371e+07 1.35973e+07 0.00323462 1.9195e+07 50.2065 0.00653229 0.987036 0 50.3022 GTEX-1MJIX-0002-SM-DE1KW B1 Blood Whole Blood 0013756 -49 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MJIX-0002-SM-DJWYZ B1 Blood Whole Blood 0013756 -49 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MJIX-0006-SM-DKPPU B1 8.4 Blood Whole Blood 0013756 -49 BP-64205 RNA isolation_PAXgene Blood RNA (Manual) 06/05/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.99158 1.36602e+06 0.946243 0.993592 0.804609 20626 1 76 0.00322494 278 0 1.092e+08 0.0532255 450526 1.09904e+08 1.15434e+07 20646 5.43632e+07 0 0.141634 0.993592 0.799454 1.092e+08 0.00350614 2.33699e+07 4.73157e+07 2.36692e+07 279 2.37459e+07 2.15253e+07 0.00336526 2.35238e+07 49.765 0.00409926 0.995604 0 50.3182 GTEX-1MJIX-0326-SM-EVR42 1 C1 2 pieces 6.8 Heart Heart - Left Ventricle 0006566 432 798 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988521 192708 0.983073 0.990624 0.827889 22156 1 76 0.00173809 370 0 1.24322e+08 0.0168296 2.15578e+06 1.25499e+08 9.24553e+06 22179 6.19216e+07 0 0.155184 0.990624 0.820127 1.24322e+08 0.00313435 2.70436e+07 3.68866e+07 2.75021e+07 343 2.71521e+07 1.16812e+07 0.00243474 2.75817e+07 50.3925 0.0171776 0.992726 0 50.4203 GTEX-1MJIX-0426-SM-DTXEN 1 C1 2 pieces; 50-60% is fat/fibrous/blood 8 Heart Heart - Atrial Appendage 0006631 433 797 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993406 684987 0.983652 0.994807 0.847557 21277 1 76 0.00161913 267 0 9.44382e+07 0.0161488 1.31767e+06 9.49312e+07 4.88558e+06 21295 4.70249e+07 0 0.136095 0.994807 0.843155 9.44382e+07 0.00207521 2.05496e+07 2.07748e+07 2.09161e+07 321 2.09643e+07 1.36414e+07 0.00184685 2.06056e+07 49.5685 0.0138802 0.996207 0 50.4419 GTEX-1MJIX-0626-SM-DTX8V 1 C1 2 pieces; numerous macrophages, areas of collapse, fibrosis, and dilated spaces, some carryover (circled) 8 Lung Lung 0008952 436 794 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990077 1.28877e+06 0.972366 0.992277 0.789664 24386 1 76 0.00206104 174 0 8.52888e+07 0.0271193 360182 8.59526e+07 4.04322e+06 24418 4.23672e+07 0 0.182702 0.992277 0.783565 8.52888e+07 0.00250696 1.90013e+07 6.78627e+06 1.89573e+07 201 1.92669e+07 1.49404e+07 0.0022835 1.88659e+07 49.4743 0.00419047 0.994477 0 49.942 GTEX-1MJIX-0726-SM-DPRYP 1 C1 2 pieces; 1 piece includes portion of capsule (target region is 1cm below), steatosis 6.6 Liver Liver 0001114 436 794 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.99271 242811 0.978022 0.994229 0.826264 20922 1 76 0.00239238 194 0 7.40193e+07 0.0210969 894339 7.44489e+07 3.60943e+06 20941 3.68376e+07 0 0.151758 0.994229 0.821496 7.40193e+07 0.00270483 1.61042e+07 1.34791e+07 1.64061e+07 237 1.6259e+07 8.14556e+06 0.00254837 1.63454e+07 50.1326 0.0120128 0.995748 0 50.4643 GTEX-1MJIX-0826-SM-DTXEO 1 C1 6 pieces; patchy eosinophilic squamous surface, chronic inflammation, and hyperplasia c/w reflux, fragment of mucosa of GE junction 8.7 Esophagus Esophagus - Mucosa 0006920 442 788 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994045 716719 0.978456 0.995104 0.850446 23162 1 76 0.00186842 218 0 8.61054e+07 0.0211709 354018 8.6529e+07 4.28774e+06 23183 4.2888e+07 0 0.12801 0.995104 0.846283 8.61054e+07 0.00232654 1.92993e+07 8.95832e+06 1.93767e+07 213 1.94816e+07 1.8221e+07 0.00209724 1.92816e+07 49.742 0.00409132 0.996163 0 50.1 GTEX-1MJIX-0926-SM-EV7AN 1 C1 6 pieces; predominantly muscularis, some residual submucosa/fat 7.6 Esophagus Esophagus - Muscularis 0004648 442 788 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990128 331889 0.971363 0.991263 0.806257 25057 1 76 0.00221165 283 0 1.15194e+08 0.0283763 507763 1.1621e+08 1.25075e+07 25094 5.74026e+07 0 0.165106 0.991263 0.799213 1.15194e+08 0.00366922 2.49565e+07 1.02862e+07 2.52156e+07 322 2.51177e+07 1.88655e+07 0.0029396 2.51706e+07 50.0526 0.00436937 0.992399 0 50.2582 GTEX-1MJIX-1126-SM-EV7AO 2 C1 6 pieces; mucosa and submucosa, superficial sloughing/autolysis 7.5 Stomach Stomach 0000945 444 786 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986414 352154 0.977177 0.987802 0.821512 24313 1 76 0.00239603 328 0 9.92421e+07 0.0222942 450335 1.00468e+08 1.08897e+07 24342 4.94066e+07 0 0.155665 0.987802 0.811492 9.92421e+07 0.00387489 2.26148e+07 5.50574e+07 2.28488e+07 282 2.28825e+07 2.29072e+07 0.00313442 2.27148e+07 49.8161 0.00448239 0.989191 0 50.2574 GTEX-1MJIX-1926-SM-E6CJE 1 C1 3 pieces; 2 pieces are artery with focal intimal thickening, 3rd piece is fat/fibrous/nerve 5.7 Blood Vessel Artery - Tibial 0007610 620 610 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992476 201369 0.972317 0.993785 0.831782 23066 1 76 0.00174337 282 0 1.05101e+08 0.0272516 240257 1.05758e+08 6.32992e+06 23098 5.23391e+07 0 0.140535 0.993785 0.826613 1.05101e+08 0.002511 2.24463e+07 1.01926e+07 2.26837e+07 310 2.25571e+07 2.1989e+07 0.00212668 2.26987e+07 50.1564 0.00227176 0.995094 0 50.263 GTEX-1MJIX-2026-SM-E9J39 1 C1 2 pieces; nerve with partial rim of fat comprising 25-40% of the specimen 7.5 Nerve Nerve - Tibial 0001323 620 610 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.977324 370915 0.966382 0.980187 0.740842 24274 1 76 0.00215354 198 0 8.45528e+07 0.0333625 221989 8.62619e+07 7.86929e+06 24317 4.19784e+07 0 0.22554 0.980187 0.726164 8.45528e+07 0.00383838 1.84413e+07 6.40952e+06 1.85914e+07 207 1.85425e+07 1.19145e+07 0.0029935 1.87215e+07 50.2402 0.00257343 0.98305 0 50.2027 GTEX-1MJIX-2126-SM-E9J3A 0 C1 2 pieces; skeletal muscle with small portion of tendon, fat 7.6 Muscle Muscle - Skeletal 0011907 620 610 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.990702 391254 0.97825 0.991548 0.852474 21347 1 76 0.00151233 205 0 8.06891e+07 0.0215268 582366 8.13769e+07 3.79511e+06 21367 4.02238e+07 0 0.125776 0.991548 0.845269 8.06891e+07 0.00222823 1.75471e+07 6.8243e+06 1.77375e+07 212 1.76834e+07 1.55665e+07 0.00186998 1.76601e+07 49.9671 0.0071564 0.992394 0 50.2698 GTEX-1MJK2-0004-SM-DE1NJ B1 Blood Whole Blood 0013756 982 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MJK2-0004-SM-DJWY4 B1 Blood Whole Blood 0013756 982 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MJK2-0006-SM-CXZIN B1 8.2 Blood Whole Blood 0013756 982 BP-64205 RNA isolation_PAXgene Blood RNA (Manual) 06/05/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.965082 504256 0.986129 0.966497 0.807852 19595 1 76 0.00193783 266 0 1.46032e+08 0.0131974 343813 1.51094e+08 8.56343e+06 19606 7.27139e+07 0 0.178276 0.966497 0.780787 1.46032e+08 0.0030603 3.45436e+07 2.35368e+08 3.50119e+07 300 3.50802e+07 4.13317e+07 0.00249825 3.47002e+07 49.7277 0.00227549 0.967912 0 50.3366 GTEX-1MJK2-0011-R2b-SM-EXUS5 B1, A1 6.7 Brain Brain - Substantia nigra 0002038 1022 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10976 05/25/2017 TruSeq.v1 EXCLUDE 0.990976 606195 0.966626 0.992107 0.860741 22312 1 76 0.00162534 181 0 6.24768e+07 0.0330265 3.27509e+06 6.29739e+07 2.69879e+06 22326 3.1076e+07 0 0.105885 0.992107 0.853947 6.24768e+07 0.00228208 1.37284e+07 7.22938e+06 1.39541e+07 205 1.39045e+07 7.39563e+06 0.00195334 1.38413e+07 49.8862 0.0520071 0.993238 0 50.4078 GTEX-1MJK2-0011-R6a-SM-EXUS3 B1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1022 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992364 675657 0.969026 0.993312 0.859765 22966 1 76 0.00159892 268 0 8.09835e+07 0.0305628 4.35284e+06 8.15287e+07 2.17268e+06 22983 4.03209e+07 0 0.109261 0.993312 0.854015 8.09835e+07 0.00217784 1.77757e+07 1.13214e+07 1.81308e+07 317 1.80798e+07 1.04155e+07 0.0018881 1.7891e+07 49.7375 0.0533903 0.994261 0 50.4944 GTEX-1MJK2-0011-R7a-SM-EXUS4 B1, A1 6.8 Brain Brain - Putamen (basal ganglia) 0001874 1022 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989741 498241 0.967154 0.991122 0.864141 21215 1 76 0.00162106 150 0 5.30226e+07 0.032612 3.95475e+06 5.34976e+07 2.1459e+06 21226 2.63733e+07 0 0.103013 0.991122 0.856469 5.30226e+07 0.00223735 1.16361e+07 9.82952e+06 1.19341e+07 181 1.18391e+07 5.28633e+06 0.00192878 1.17947e+07 49.9061 0.0739238 0.992503 0 50.6321 GTEX-1MJK2-0011-R9b-SM-EZ6MZ B1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1022 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985705 252157 0.957701 0.986874 0.829868 23311 1 76 0.00238227 298 0 7.76726e+07 0.0419642 2.14486e+06 7.87057e+07 6.08825e+06 23329 3.87181e+07 0 0.127833 0.986874 0.818975 7.76726e+07 0.00309285 1.72051e+07 9.07554e+06 1.73716e+07 257 1.72396e+07 1.07767e+07 0.00273714 1.74216e+07 50.2625 0.0272516 0.988043 0 50.2407 GTEX-1MJK2-0126-SM-EVR52 1 B1 2 pieces; atheromatous plaque with mural organizing thrombosis narrowing the lumen by ~50% and 75% (arrows); ~1mm of attached adventitia 6.5 Blood Vessel Artery - Tibial 0007610 1158 749 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987667 275916 0.976348 0.989622 0.808932 23947 1 76 0.00232869 280 0 1.02033e+08 0.0232585 316799 1.03103e+08 8.16757e+06 23989 5.07734e+07 0 0.167416 0.989622 0.800537 1.02033e+08 0.00351069 2.21876e+07 8.60564e+06 2.24021e+07 278 2.23851e+07 1.98437e+07 0.00291852 2.23894e+07 50.0049 0.00307266 0.991577 0 50.2406 GTEX-1MJK2-0426-SM-DTXE5 1 B1 6 pieces; 0 to 10% internal (periadnexal fat) and one piece with ~20% external fat (outlined); ~36 micron thick epidermis 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1165 742 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994238 699430 0.977317 0.995044 0.840564 22685 1 76 0.00194222 261 0 9.27283e+07 0.0223575 366714 9.31901e+07 4.28267e+06 22712 4.61918e+07 0 0.136753 0.995044 0.836398 9.27283e+07 0.0022705 2.00884e+07 1.06496e+07 2.01254e+07 247 2.02197e+07 1.87885e+07 0.00210623 2.00702e+07 49.8144 0.00393512 0.995851 0 50.0461 GTEX-1MJK2-0526-SM-DTXE6 1 B1 3 pieces; two pieces of mature adipose tissue with ~15% fibrovascular component and nerves (arrow); the third piece represents deep dermis and fat (outlined) 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1168 739 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993519 442926 0.976262 0.994453 0.83281 22592 1 76 0.00201654 179 0 7.5163e+07 0.0233587 274208 7.55823e+07 4.10943e+06 22613 3.7438e+07 0 0.143452 0.994453 0.828191 7.5163e+07 0.00248017 1.65157e+07 7.41828e+06 1.66307e+07 186 1.66674e+07 1.43775e+07 0.00224814 1.6551e+07 49.8249 0.00362794 0.995387 0 50.1736 GTEX-1MJK2-0726-SM-DTXE7 2 B1 2 pieces; well preserved fibromuscular stroma and glandular component with mostly sloughed autolyzed epithelium 6.6 Prostate Prostate 0002367 1250 657 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993135 449566 0.965179 0.993932 0.818549 24874 1 76 0.00200517 378 0 1.04622e+08 0.034474 1.20043e+06 1.05261e+08 5.66454e+06 24915 5.21389e+07 0 0.14663 0.993932 0.813582 1.04622e+08 0.00233915 2.29736e+07 1.62623e+07 2.32877e+07 336 2.32639e+07 1.78243e+07 0.00217202 2.30907e+07 49.8131 0.0114043 0.99473 0 50.3395 GTEX-1MJK2-0826-SM-DTXE8 1 B1 2 pieces; congestion 5.8 Thyroid Thyroid 0002046 1252 655 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993534 368982 0.970105 0.994054 0.84339 23450 1 76 0.00195596 211 0 8.6474e+07 0.0294998 292060 8.69912e+07 4.65371e+06 23476 4.30955e+07 0 0.126715 0.994054 0.838375 8.6474e+07 0.00221761 1.8945e+07 1.13005e+07 1.90977e+07 213 1.91426e+07 1.83352e+07 0.00208672 1.8958e+07 49.7577 0.00335735 0.994575 0 50.2006 GTEX-1MJK2-1126-SM-E9TJ7 1 B1 2 pieces; marked congestion and hemosiderosis; anthracosis; large and irregular in shape empty spaces bounded by congested capillaries; larger vessels included (arrows) 6.1 Lung Lung 0008952 1261 646 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.968691 257170 0.974065 0.970405 0.754576 24555 1 76 0.00230338 269 0 9.73525e+07 0.0256109 1.43779e+06 1.00322e+08 4.6535e+06 24605 4.83991e+07 0 0.219489 0.970405 0.732245 9.73525e+07 0.00305253 2.1497e+07 1.02157e+07 2.17443e+07 267 2.16633e+07 1.32129e+07 0.00267729 2.17381e+07 50.0861 0.0143318 0.97212 0 50.286 GTEX-1MJK2-1326-SM-EV7A4 1 B1 2 pieces; spermatogenesis present; congestion 6.8 Testis Testis 0000473 1263 644 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990978 435421 0.924345 0.991963 0.727189 34690 1 76 0.00235139 291 0 1.22562e+08 0.0752858 841931 1.23555e+08 1.32912e+07 34771 6.10862e+07 0 0.197156 0.991963 0.721344 1.22562e+08 0.00352035 2.51212e+07 1.63302e+07 2.52789e+07 300 2.53145e+07 2.10882e+07 0.00293529 2.51915e+07 49.8782 0.00681422 0.992947 0 50.1564 GTEX-1MJK2-1626-SM-EVYCQ 1 B1 2 pieces; ~10% interstitial fat; congestion 6 Heart Heart - Atrial Appendage 0006631 1278 629 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989343 310923 0.978232 0.990193 0.839138 21703 1 76 0.00173712 366 0 8.73651e+07 0.0216674 5.06473e+06 8.82304e+07 3.74059e+06 21720 4.3555e+07 0 0.139095 0.990193 0.830908 8.73651e+07 0.00278694 1.92013e+07 2.10508e+07 1.96999e+07 367 1.95924e+07 6.06859e+06 0.00226158 1.93703e+07 49.715 0.0574035 0.991044 0 50.6409 GTEX-1MJK2-2226-SM-EVYCR 2 B1 2 pieces; fibroadipose tissue and nerves with gynecomastoid ductal and stromal hyperplasia; sloughed autolyzed ductal epithelium 6.5 Breast Breast - Mammary Tissue 0008367 1297 610 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988948 592018 0.96121 0.989498 0.774153 24427 1 76 0.00191861 181 0 8.62674e+07 0.0384281 379764 8.7183e+07 3.82334e+06 24466 4.29916e+07 0 0.187057 0.989498 0.766024 8.62674e+07 0.00290106 1.8723e+07 2.00255e+07 1.90361e+07 199 1.89667e+07 1.58974e+07 0.00240956 1.88513e+07 49.8475 0.00435594 0.990049 0 50.4146 GTEX-1MJK2-2426-SM-EVYCS 1 B1 6 pieces; well trimmed target muscularis 6.2 Esophagus Esophagus - Muscularis 0004648 1306 601 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 EXCLUDE 0.960004 69883 0.990798 0.961155 0.924209 17451 1 76 0.00166671 513 0 8.91147e+07 0.00912345 8.06591e+06 9.27163e+07 4.33197e+06 17454 4.44105e+07 0 0.0665889 0.961155 0.888308 8.91147e+07 0.00306637 2.03825e+07 1.23588e+07 2.10812e+07 454 2.08456e+07 2.37461e+06 0.0023657 2.06946e+07 49.8183 0.0869955 0.962305 0 50.8425 GTEX-1MJK2-2526-SM-E9TJ3 1 B1 6 pieces; well trimmed target muscularis 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1307 600 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.962147 224570 0.976462 0.963776 0.819824 22177 1 76 0.00204255 203 0 7.77842e+07 0.023319 2.50548e+06 8.07077e+07 3.8881e+06 22200 3.86862e+07 0 0.156638 0.963776 0.790127 7.77842e+07 0.00272249 1.71977e+07 7.78694e+06 1.75212e+07 230 1.74714e+07 1.01655e+07 0.00238195 1.73616e+07 49.8424 0.0310438 0.965406 0 50.4658 GTEX-1MJK2-3026-SM-EV7A5 2 B1 4 pieces;2 of 4 with congested meninges (arrows); scattered Purkinje cells present 7.1 Brain Brain - Cerebellum 0002037 1342 565 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989729 1.30717e+06 0.94164 0.990738 0.734815 25227 1 76 0.00263241 272 0 1.16146e+08 0.0578734 1.94118e+06 1.17232e+08 1.33821e+07 25273 5.7764e+07 0 0.206826 0.990738 0.728009 1.16146e+08 0.00384738 2.49329e+07 3.46476e+07 2.51357e+07 305 2.54142e+07 1.61982e+07 0.00323928 2.47689e+07 49.3571 0.0165584 0.991747 0 50.2025 GTEX-1MJK3-0003-SM-DE1IP B1 Blood Whole Blood 0013756 -226 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MJK3-0003-SM-DJWWQ B1 Blood Whole Blood 0013756 -226 BP-64184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/05/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MJK3-0006-SM-DKPP9 B1 6.4 Blood Whole Blood 0013756 -226 BP-64205 RNA isolation_PAXgene Blood RNA (Manual) 06/05/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.990734 707359 0.965729 0.992904 0.839874 18863 1 76 0.00310839 214 0 1.03653e+08 0.0335769 450787 1.04394e+08 1.08388e+07 18874 5.15866e+07 0 0.125855 0.992904 0.833914 1.03653e+08 0.00360992 2.27766e+07 5.60792e+07 2.31634e+07 233 2.32138e+07 2.38188e+07 0.0033586 2.2941e+07 49.7045 0.00431812 0.995075 0 50.4209 GTEX-1MJK3-0126-SM-DPRYY 2 C1 2 pieces; mild congestion; small lymphoid follicles 7.1 Spleen Spleen 0002106 58 1431 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.993015 320766 0.963836 0.994023 0.778042 23848 1 76 0.00267584 158 0 7.288e+07 0.0356925 678691 7.33183e+07 3.46683e+06 23881 3.6299e+07 0 0.185794 0.994023 0.773392 7.288e+07 0.00279177 1.59734e+07 8.34944e+06 1.61125e+07 167 1.60903e+07 1.18541e+07 0.00273375 1.60639e+07 49.9589 0.00925678 0.995031 0 50.2168 GTEX-1MJK3-0326-SM-DTX96 2 C1 2 pieces; 0.7 mm focus of crystalline material. probably colloid 5.9 Thyroid Thyroid 0002046 460 1029 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988975 881405 0.96305 0.991118 0.718459 25009 1 76 0.00227774 150 0 7.85995e+07 0.0361653 207769 7.93039e+07 3.93518e+06 25054 3.90369e+07 0 0.244592 0.991118 0.712077 7.85995e+07 0.00266503 1.7242e+07 8.87063e+06 1.71962e+07 176 1.74346e+07 1.09761e+07 0.00247097 1.71572e+07 49.599 0.00261991 0.99326 0 49.9335 GTEX-1MJK3-0626-SM-E6CJB 1 C1 2 pieces; minimal fibrous content 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 481 1008 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993471 350894 0.979006 0.994858 0.847745 22719 1 76 0.00168974 282 0 1.00885e+08 0.0206718 483368 1.01407e+08 6.20546e+06 22738 5.02552e+07 0 0.131261 0.994858 0.843386 1.00885e+08 0.00228385 2.21631e+07 8.51218e+06 2.23919e+07 324 2.22781e+07 1.94353e+07 0.00198638 2.24025e+07 50.1393 0.00476662 0.996245 0 50.2568 GTEX-1MJK3-0726-SM-E6CJC 2 C1 6 pieces; minimal dermal fat; focal untrimmed subcutaneous fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 477 1012 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992343 273162 0.975992 0.993712 0.820689 23158 1 76 0.00182042 286 0 8.98421e+07 0.0237767 352565 9.04105e+07 5.64825e+06 23179 4.47525e+07 0 0.155304 0.993712 0.815529 8.98421e+07 0.00249557 1.97713e+07 9.26803e+06 1.99487e+07 259 1.9833e+07 1.65121e+07 0.00215753 1.99976e+07 50.2065 0.0038996 0.995082 0 50.2233 GTEX-1MJK3-0926-SM-EV7AY 2 C1 6 pieces; mucosa with variable states of autolysis 6 Colon Colon - Transverse 0001157 501 988 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986504 212298 0.971887 0.987716 0.819049 25173 1 76 0.00246478 274 0 1.01186e+08 0.02727 780573 1.02445e+08 1.11037e+07 25215 5.03716e+07 0 0.152838 0.987716 0.808987 1.01186e+08 0.00392253 2.22184e+07 1.14653e+07 2.24704e+07 330 2.2326e+07 1.47369e+07 0.00319276 2.24679e+07 50.1584 0.00761945 0.988927 0 50.2819 GTEX-1MJK3-1126-SM-E9J3F 2 C1 2 pieces; largely fat; few ducts in fibrous component 6 Breast Breast - Mammary Tissue 0008367 517 972 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.98743 582070 0.976799 0.988541 0.819715 22977 1 76 0.00176048 375 0 1.09384e+08 0.0229201 743454 1.10652e+08 5.47875e+06 23007 5.45098e+07 0 0.157084 0.988541 0.810322 1.09384e+08 0.00245116 2.39868e+07 1.12617e+07 2.43722e+07 356 2.4265e+07 1.77812e+07 0.00210543 2.42074e+07 49.9406 0.00671885 0.989652 0 50.3985 GTEX-1MJK3-1226-SM-E9J3G 2 C1 6 pieces; foci of chronic inflammation in lamina propria 6.8 Esophagus Esophagus - Mucosa 0006920 522 967 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 EXCLUDE 0.987853 502435 0.976226 0.988879 0.823959 22744 1 76 0.00173853 191 0 8.28405e+07 0.0234656 210572 8.37721e+07 4.00953e+06 22771 4.12701e+07 0 0.152268 0.988879 0.814795 8.28405e+07 0.00268395 1.82977e+07 7.08929e+06 1.84488e+07 205 1.83874e+07 1.5863e+07 0.00221075 1.84462e+07 50.0798 0.00251363 0.989905 0 50.2055 GTEX-1MJK3-1326-SM-E6CJD 2 C1 6 pieces; foci of squamous epithelium and glandular carry-over [labeled] <5% area 7.3 Esophagus Esophagus - Muscularis 0004648 520 969 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992222 188107 0.977346 0.993652 0.840685 22197 1 76 0.00171812 166 0 7.4613e+07 0.0223218 264536 7.50897e+07 4.7056e+06 22214 3.71672e+07 0 0.136661 0.993652 0.835348 7.4613e+07 0.00243842 1.61497e+07 5.79961e+06 1.62996e+07 194 1.62239e+07 1.40346e+07 0.00207775 1.63172e+07 50.1432 0.00352293 0.995081 0 50.231 GTEX-1MJK3-1426-SM-E9TK1 1 C1 2 pieces; internal fat <5% 8.1 Muscle Muscle - Skeletal 0011907 654 835 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.990405 462463 0.985582 0.992305 0.888693 18687 1 76 0.00164438 214 0 7.87292e+07 0.0142164 625213 7.93397e+07 2.99988e+06 18689 3.91898e+07 0 0.0968886 0.992305 0.881854 7.87292e+07 0.00221673 1.72849e+07 9.48594e+06 1.73975e+07 232 1.74439e+07 1.56415e+07 0.00193001 1.73678e+07 49.8906 0.0078802 0.994205 0 50.1624 GTEX-1MJK3-1526-SM-E6CJZ 1 C1 2 pieces; external fat 20%; small artery in external fat [labeled] 7.9 Nerve Nerve - Tibial 0001323 655 834 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994372 180417 0.973044 0.995208 0.791355 23690 1 76 0.00186604 222 0 8.21329e+07 0.0265731 175757 8.25284e+07 4.85871e+06 23723 4.09207e+07 0 0.181689 0.995208 0.787563 8.21329e+07 0.00227439 1.80686e+07 5.98816e+06 1.81885e+07 215 1.81149e+07 1.51108e+07 0.00207004 1.82022e+07 50.1201 0.00212965 0.996045 0 50.1652 GTEX-1MUQO-0004-SM-DE1JZ B1 Blood Whole Blood 0013756 -70 BP-64241 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/08/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1MUQO-0004-SM-DJWY6 B1 Blood Whole Blood 0013756 -70 BP-64241 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/08/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1MUQO-0005-SM-DKPPT B1 8.3 Blood Whole Blood 0013756 -70 BP-64242 RNA isolation_PAXgene Blood RNA (Manual) 06/08/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.979595 697636 0.973264 0.981735 0.835988 19275 1 76 0.00288408 271 0 1.40066e+08 0.025488 508594 1.42672e+08 1.43904e+07 19284 6.96696e+07 0 0.137276 0.981735 0.820718 1.40066e+08 0.00343575 3.21382e+07 1.47866e+08 3.23716e+07 304 3.25081e+07 3.50495e+07 0.00315932 3.23043e+07 49.8428 0.00356478 0.983874 0 50.1809 GTEX-1MUQO-0126-SM-EAZ58 0 B1 6 pieces moderate amounts of dermal fat, rep delineated; squamous epithelium is ~35-40 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 376 858 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989184 275117 0.974253 0.989822 0.821006 23915 1 76 0.001942 317 0 9.45808e+07 0.0254878 518917 9.55533e+07 8.24979e+06 23941 4.71428e+07 0 0.153247 0.989822 0.81265 9.45808e+07 0.00272566 2.0664e+07 9.71345e+06 2.08219e+07 290 2.07368e+07 1.71538e+07 0.00233358 2.08118e+07 50.0903 0.00543066 0.99046 0 50.1903 GTEX-1MUQO-0226-SM-E9TJL 0 B1 4 pieces, interstitial fat/vascular elements are ~10% of tissue; rep delineated 8.6 Muscle Muscle - Skeletal 0011907 378 856 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.989757 660557 0.983669 0.99147 0.881612 20045 1 76 0.00170419 283 0 9.86517e+07 0.0160452 1.15026e+06 9.95004e+07 4.20578e+06 20060 4.91104e+07 0 0.102057 0.99147 0.874092 9.86517e+07 0.00209846 2.14726e+07 1.17933e+07 2.16874e+07 313 2.17261e+07 2.15786e+07 0.00190098 2.15833e+07 49.8351 0.0115604 0.993183 0 50.2489 GTEX-1MUQO-0326-SM-E9J2Y 0 B1 2 pieces, no adherent fat. 6.8 Nerve Nerve - Tibial 0001323 379 855 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.978716 286778 0.973661 0.979374 0.837728 23062 1 76 0.00170179 281 0 8.80749e+07 0.0260551 375553 8.99298e+07 4.38905e+06 23093 4.3886e+07 0 0.135933 0.979374 0.820449 8.80749e+07 0.00239144 1.94043e+07 7.56831e+06 1.96186e+07 260 1.9467e+07 1.548e+07 0.00204638 1.96207e+07 50.1966 0.00417607 0.980032 0 50.2746 GTEX-1MUQO-0426-SM-E9J2Z 0 B1 2 pieces, no adherent fat; trace atherosis 7.6 Blood Vessel Artery - Tibial 0007610 380 854 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.988304 334737 0.979264 0.988814 0.883095 20558 1 76 0.00160124 217 0 8.9814e+07 0.0202796 230386 9.08301e+07 4.2111e+06 20568 4.47642e+07 0 0.0961684 0.988814 0.873217 8.9814e+07 0.00222512 1.941e+07 6.76062e+06 1.95339e+07 241 1.94282e+07 2.00842e+07 0.00191302 1.95661e+07 50.1768 0.00253645 0.989323 0 50.159 GTEX-1MUQO-0526-SM-E9J31 0 B1 2 pieces, ~5-10% fascia/vascular elements; rep delineated 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 380 854 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.977362 423824 0.972854 0.978261 0.818242 23990 1 76 0.00180297 380 0 1.274e+08 0.0267907 761526 1.30231e+08 6.94059e+06 24024 6.346e+07 0 0.154612 0.978261 0.800454 1.274e+08 0.00269364 2.78329e+07 1.51739e+07 2.82297e+07 427 2.80532e+07 2.17008e+07 0.0022479 2.81368e+07 50.0744 0.00584751 0.979161 0 50.3538 GTEX-1MUQO-0726-SM-E9TJM 0 B1 2 pieces, ~5 x1.5 adherent nubbin of perithyroidal fibrovascular tissue delineated. Floater in block, tagged. 6.5 Thyroid Thyroid 0002046 383 851 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.984291 474213 0.964874 0.986038 0.751451 24312 1 76 0.00194604 198 0 8.6088e+07 0.0348716 390102 8.7307e+07 3.74379e+06 24365 4.28422e+07 0 0.213422 0.986038 0.740959 8.6088e+07 0.00258126 1.87815e+07 1.05858e+07 1.89175e+07 211 1.89032e+07 1.25037e+07 0.00226309 1.89294e+07 50.0346 0.00446816 0.987785 0 50.1803 GTEX-1MUQO-0826-SM-EVYCZ 1 B1 2 pieces, trace fascia 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 384 850 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990222 286148 0.976506 0.990782 0.812481 21965 1 76 0.00178811 194 0 7.69741e+07 0.02323 421981 7.76903e+07 3.49519e+06 21988 3.83727e+07 0 0.164025 0.990782 0.804991 7.69741e+07 0.00280069 1.692e+07 6.88544e+06 1.71042e+07 209 1.70289e+07 1.20267e+07 0.00229411 1.70402e+07 50.0165 0.00543158 0.991342 0 50.2706 GTEX-1MUQO-1226-SM-E9TJK 1 B1 2 pieces, minimal chronic ischemic changes 8.3 Heart Heart - Left Ventricle 0006566 391 843 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98928 706446 0.98491 0.991233 0.869561 21031 1 76 0.00165378 371 0 1.10577e+08 0.0148132 1.62628e+06 1.11555e+08 4.5186e+06 21047 5.5027e+07 0 0.115349 0.991233 0.861938 1.10577e+08 0.00211045 2.42986e+07 1.75877e+07 2.44508e+07 353 2.44807e+07 2.0651e+07 0.00188166 2.44428e+07 49.9612 0.0145782 0.993187 0 50.1561 GTEX-1MUQO-1326-SM-EV7AE 1 B1 2 pieces, no abnormalities 6.3 Spleen Spleen 0002106 392 842 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986692 229647 0.958441 0.987494 0.772087 24525 1 76 0.00272518 206 0 8.71802e+07 0.0407922 446716 8.82842e+07 8.9807e+06 24560 4.3416e+07 0 0.186354 0.987494 0.762432 8.71802e+07 0.00385355 1.90186e+07 1.3252e+07 1.91856e+07 243 1.91044e+07 1.21633e+07 0.00328891 1.91689e+07 50.0842 0.00505998 0.988297 0 50.2186 GTEX-1MUQO-1426-SM-DPRYJ 1 B1 2 pieces, islets rare but well -preserved; rep encircled ~15% adherent fat; rep delineated 6.6 Pancreas Pancreas 0001150 402 832 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993953 257747 0.977328 0.995023 0.836139 20763 1 76 0.00189854 108 0 5.82024e+07 0.0225261 141885 5.84935e+07 3.07741e+06 20776 2.89967e+07 0 0.14119 0.995023 0.831977 5.82024e+07 0.00297835 1.33513e+07 1.36953e+07 1.35487e+07 116 1.3513e+07 1.61464e+07 0.00243786 1.34491e+07 49.8816 0.00242565 0.996093 0 50.3668 GTEX-1MUQO-1526-SM-DPRYK 1 B1 2 pieces, hyperplastic glandular pattern 6.4 Prostate Prostate 0002367 403 831 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.994374 263161 0.969655 0.995213 0.80088 23644 1 76 0.00251449 156 0 6.934e+07 0.0299852 501560 6.96735e+07 3.46296e+06 23672 3.45409e+07 0 0.168775 0.995213 0.797046 6.934e+07 0.00249095 1.5345e+07 6.86785e+06 1.54527e+07 171 1.54187e+07 1.0938e+07 0.00250273 1.54353e+07 50.027 0.00719872 0.996051 0 50.1749 GTEX-1MUQO-1626-SM-DTXED 1 B1 6 pieces, confirmed target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 406 828 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995086 659826 0.979108 0.995931 0.881941 21318 1 76 0.00173763 289 0 9.15579e+07 0.0205554 819946 9.1932e+07 4.88334e+06 21333 4.56255e+07 0 0.0971675 0.995931 0.878352 9.15579e+07 0.00205962 1.97239e+07 7.50016e+06 1.98813e+07 304 1.99353e+07 1.8174e+07 0.00189849 1.97434e+07 49.7582 0.00891904 0.996775 0 50.1988 GTEX-1MUQO-1926-SM-EAZ59 1 B1 6 pieces, mucosa well fixed, up to ~1mm, 40-50% of thickness 6.6 Stomach Stomach 0000945 410 824 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989179 296987 0.979092 0.990089 0.836512 23422 1 76 0.00187114 422 0 1.0233e+08 0.0205554 996179 1.03355e+08 8.55248e+06 23448 5.09815e+07 0 0.14258 0.990089 0.828221 1.0233e+08 0.00269662 2.33131e+07 5.80965e+07 2.34911e+07 347 2.34451e+07 2.19484e+07 0.0022835 2.34442e+07 49.9991 0.00963847 0.990998 0 50.1902 GTEX-1MUQO-2426-SM-EAZ5A 1 B1 6 pieces, ~40% target lymphoid aggregates, rep delineated 5.9 Small Intestine Small Intestine - Terminal Ileum 0001211 435 799 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.985657 283513 0.971721 0.986621 0.816938 25139 1 76 0.00198692 273 0 9.40482e+07 0.0278774 579817 9.53235e+07 7.8331e+06 25177 4.68469e+07 0 0.154783 0.986621 0.806009 9.40482e+07 0.0028852 2.07103e+07 9.24897e+06 2.08935e+07 315 2.08033e+07 1.49586e+07 0.00243562 2.08865e+07 50.0998 0.00608262 0.987585 0 50.2201 GTEX-1MUQO-2526-SM-E9TJN 1 B1 6 pieces, glomeruli present; patchy chronic interstitial inflammation 7.3 Kidney Kidney - Cortex 0001225 436 798 BP-79140 RNA Extraction from Paxgene-derived Lysate Plate Based 10/05/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987291 409554 0.975486 0.989118 0.823388 23595 1 76 0.00200791 139 0 6.49044e+07 0.02413 413407 6.56185e+07 2.76478e+06 23617 3.229e+07 0 0.152098 0.989118 0.814428 6.49044e+07 0.00265791 1.42917e+07 5.25149e+06 1.43831e+07 160 1.43982e+07 1.11639e+07 0.00233231 1.43851e+07 49.9773 0.00630016 0.990945 0 50.1593 GTEX-1MUQO-2626-SM-EWRO3 1 B1 6 pieces, mucosa up to ~0.3 mm, ~1--15% of thickness 7 Colon Colon - Transverse 0001157 438 796 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986322 162418 0.975206 0.989967 0.83493 21613 1 76 0.00213775 131 0 5.66803e+07 0.0245284 451048 5.72547e+07 3.73591e+06 21628 2.81789e+07 0 0.140275 0.989967 0.826554 5.66803e+07 0.00304079 1.23197e+07 4.96449e+06 1.24514e+07 140 1.24732e+07 9.48998e+06 0.00257705 1.24773e+07 50.0082 0.00787792 0.993613 0 50.2659 GTEX-1N2DV-0003-SM-DE1K1 B1 Blood Whole Blood 0013756 -131 BP-64417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/12/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N2DV-0003-SM-DJWXC B1 Blood Whole Blood 0013756 -131 BP-64417 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/12/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1N2DV-0226-SM-E6CJ6 0 B1 6 pieces, trace adherent fat. Squamous epithelium up to ~30 microns 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 161 1269 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992171 438922 0.973714 0.993417 0.79305 24690 1 76 0.00212344 290 0 1.02852e+08 0.0260407 854077 1.03534e+08 6.1109e+06 24727 5.12278e+07 0 0.180664 0.993417 0.787829 1.02852e+08 0.00273328 2.24906e+07 9.68168e+06 2.27176e+07 325 2.25572e+07 1.70202e+07 0.00242798 2.2761e+07 50.2249 0.00824927 0.994662 0 50.2511 GTEX-1N2DV-0326-SM-E6CJ7 0 B1 2 pieces, trace nubbins adherent fat, rep delineated 8.5 Nerve Nerve - Tibial 0001323 167 1263 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993967 223878 0.972164 0.994964 0.791708 24228 1 76 0.00198672 294 0 9.84562e+07 0.0275118 360237 9.89545e+07 5.97265e+06 24267 4.90628e+07 0 0.180456 0.994964 0.787721 9.84562e+07 0.00255556 2.16253e+07 8.76152e+06 2.18073e+07 281 2.16847e+07 1.82355e+07 0.00227086 2.18349e+07 50.1726 0.00364043 0.995961 0 50.2095 GTEX-1N2DV-0426-SM-E9J3B 0 B1 2 pieces, nubbins of adherent fascia up to ~1mm, rep delineated 6.6 Blood Vessel Artery - Tibial 0007610 170 1260 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.981616 364003 0.967102 0.982437 0.799226 21877 1 76 0.00210823 174 0 7.76977e+07 0.0325786 676356 7.90867e+07 4.22527e+06 21903 3.86929e+07 0 0.167876 0.982437 0.78519 7.76977e+07 0.00290174 1.67699e+07 1.03922e+07 1.70229e+07 196 1.68723e+07 1.20478e+07 0.00250465 1.69895e+07 50.1731 0.00855209 0.983258 0 50.3743 GTEX-1N2DV-0526-SM-DTX8W 0 B1 2 pieces (fragmented); ~10% interstitial fat/vascular elements, rep delineated; few foci of inflammatory myositis, rep encircled 9.2 Muscle Muscle - Skeletal 0011907 173 1257 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991269 1.19314e+06 0.983778 0.993467 0.869829 21070 1 76 0.00199866 214 0 9.28902e+07 0.0159743 1.33125e+06 9.3501e+07 4.1525e+06 21080 4.61713e+07 0 0.113949 0.993467 0.864146 9.28902e+07 0.0024582 2.01976e+07 9.86008e+06 2.03012e+07 242 2.05171e+07 1.87552e+07 0.00222792 2.01591e+07 49.5599 0.0142378 0.995666 0 50.128 GTEX-1N2DV-0626-SM-E9U5H 0 B1 2 pieces, 5-10% fascia/mesothelium/vascular elements, rep delineated 9.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 179 1251 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992546 343441 0.97886 0.993531 0.840873 22869 1 76 0.00188845 280 0 9.69695e+07 0.0208389 1.13045e+06 9.76009e+07 3.57122e+06 22894 4.83521e+07 0 0.137987 0.993531 0.835433 9.69695e+07 0.00270122 2.14048e+07 8.91274e+06 2.15733e+07 289 2.15237e+07 1.83151e+07 0.00229443 2.1544e+07 50.0236 0.0115824 0.994516 0 50.1961 GTEX-1N2DV-0926-SM-E9TJT 1 B1 6 pieces, mucosa up to ~0.7mm, ~20% of thickness. Focal mild microcystic metaplasia, rep foci delineated 8.3 Stomach Stomach 0000945 190 1240 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988389 495238 0.976984 0.990343 0.829706 23551 1 76 0.00210865 281 0 1.01411e+08 0.0227019 880169 1.024e+08 4.21702e+06 23575 5.04739e+07 0 0.147278 0.990343 0.821694 1.01411e+08 0.00277207 2.21217e+07 8.61444e+06 2.23332e+07 292 2.23317e+07 1.99237e+07 0.00243971 2.2308e+07 49.9734 0.00859542 0.992297 0 50.2378 GTEX-1N2DV-1426-SM-DPRYQ 1 B1 6 pieces, well-preserved mucosa up to ~0.35mm, ~10-15% thickness 8.2 Colon Colon - Transverse 0001157 206 1224 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992192 341552 0.974347 0.993219 0.810389 23035 1 76 0.0025509 183 0 7.39644e+07 0.0245552 1.37423e+06 7.44693e+07 4.33578e+06 23059 3.6816e+07 0 0.163958 0.993219 0.804894 7.39644e+07 0.00312182 1.6454e+07 9.69656e+06 1.66311e+07 183 1.65987e+07 1.17467e+07 0.00283607 1.65551e+07 49.9342 0.0184537 0.994246 0 50.2676 GTEX-1N2DV-1526-SM-DTXEP 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~35-40 microns 8.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 207 1223 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993357 832085 0.974171 0.994503 0.84009 22814 1 76 0.00216425 256 0 9.18741e+07 0.0255682 698390 9.2382e+07 4.89095e+06 22836 4.57607e+07 0 0.134082 0.994503 0.835472 9.18741e+07 0.00258334 2.01748e+07 1.25335e+07 2.02542e+07 242 2.03775e+07 1.78027e+07 0.00237355 2.01565e+07 49.7274 0.00755981 0.99565 0 50.0982 GTEX-1N2DV-1726-SM-DPRYR 1 B1 2 pieces, islets present but rare, well-preserved 6.5 Pancreas Pancreas 0001150 211 1219 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993243 306279 0.980418 0.994366 0.853177 20676 1 76 0.00231491 103 0 6.73025e+07 0.0192696 279548 6.76838e+07 3.6044e+06 20693 3.35216e+07 0 0.127241 0.994366 0.84837 6.73025e+07 0.00329784 1.55099e+07 1.70445e+07 1.57386e+07 110 1.57111e+07 1.92343e+07 0.00280582 1.5614e+07 49.845 0.0041302 0.995488 0 50.3659 GTEX-1N2DV-1826-SM-E6CJ5 1 B1 6 pieces, confirmed target muscularis 7.5 Colon Colon - Sigmoid 0001159 221 1209 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993787 274235 0.976067 0.994948 0.821753 23332 1 76 0.00202691 283 0 9.78438e+07 0.02364 712726 9.83406e+07 5.90917e+06 23367 4.87547e+07 0 0.154314 0.994948 0.817601 9.78438e+07 0.00262924 2.12301e+07 8.50951e+06 2.14362e+07 299 2.13172e+07 1.73567e+07 0.00232773 2.14463e+07 50.1509 0.00724752 0.996109 0 50.2415 GTEX-1N2DV-2026-SM-EV7BL 1 B1 6 pieces squamous mucosa up to ~0.4mm, ~20% of thickness 9.1 Esophagus Esophagus - Mucosa 0006920 224 1206 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990262 323362 0.978177 0.9912 0.846039 22710 1 76 0.00250097 281 0 1.10065e+08 0.0213984 733208 1.11042e+08 1.20854e+07 22733 5.485e+07 0 0.132138 0.9912 0.838593 1.10065e+08 0.00364737 2.47753e+07 1.50918e+07 2.49861e+07 319 2.49149e+07 2.23551e+07 0.00307363 2.49499e+07 50.0351 0.00660296 0.992137 0 50.2118 GTEX-1N2DW-0003-SM-DE1KC B1 Blood Whole Blood 0013756 867 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N2DW-0003-SM-DJWYX B1 Blood Whole Blood 0013756 867 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1N2DW-0006-SM-DKPP4 B1 7.8 Blood Whole Blood 0013756 867 BP-64490 RNA isolation_PAXgene Blood RNA (Manual) 06/15/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.962103 372428 0.98772 0.963986 0.808556 18580 1 76 0.00247708 269 0 1.37088e+08 0.0110115 283820 1.42209e+08 1.44602e+07 18589 6.81692e+07 0 0.179164 0.963986 0.779437 1.37088e+08 0.00285071 3.26883e+07 2.24641e+08 3.29992e+07 285 3.30721e+07 3.94399e+07 0.00266353 3.28835e+07 49.857 0.0019958 0.96587 0 50.2366 GTEX-1N2DW-0011-R11b-SM-EXOIL B1, A1 6.7 Brain Brain - Cerebellar Hemisphere 0002037 856 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989097 626128 0.95344 0.991278 0.759309 24017 1 76 0.00215816 272 0 1.14235e+08 0.0460601 1.85484e+06 1.1524e+08 6.7188e+06 24058 5.68039e+07 0 0.194131 0.991278 0.752687 1.14235e+08 0.00345262 2.4764e+07 1.16449e+07 2.49429e+07 321 2.50173e+07 1.51726e+07 0.00280397 2.49076e+07 49.8901 0.0160954 0.99346 0 50.18 GTEX-1N2DW-0011-R4b-SM-EZ6MD B1, A1 6.6 Brain Brain - Amygdala 0001876 856 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989435 283711 0.970026 0.990992 0.859614 24029 1 76 0.00232966 278 0 1.04476e+08 0.0296715 7.60204e+06 1.05426e+08 7.88259e+06 24050 5.20705e+07 0 0.110412 0.990992 0.85187 1.04476e+08 0.00318221 2.31009e+07 1.65638e+07 2.34899e+07 322 2.34026e+07 1.21712e+07 0.00275526 2.33229e+07 49.9146 0.0721078 0.992547 0 50.4174 GTEX-1N2DW-0011-R5a-SM-EYYX3 B1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 856 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985731 374837 0.966967 0.989488 0.85542 22515 1 76 0.00206994 267 0 8.40251e+07 0.0327201 6.42262e+06 8.49178e+07 3.17614e+06 22530 4.17686e+07 0 0.111547 0.989488 0.846428 8.40251e+07 0.00348213 1.82189e+07 2.21424e+07 1.86127e+07 326 1.85465e+07 7.59341e+06 0.00277336 1.85361e+07 49.9859 0.0756334 0.993244 0 50.5347 GTEX-1N2DW-0011-R6a-SM-EZ6MW B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 856 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989229 338737 0.967495 0.990897 0.86141 23657 1 76 0.00241076 376 0 1.05557e+08 0.0322931 8.63329e+06 1.06527e+08 8.2338e+06 23676 5.26025e+07 0 0.106085 0.990897 0.853569 1.05557e+08 0.00352113 2.28971e+07 1.93734e+07 2.37236e+07 338 2.35341e+07 9.94696e+06 0.00296501 2.32175e+07 49.6614 0.0810431 0.992566 0 50.8864 GTEX-1N2DW-0226-SM-E9TK2 1 B1 6 pieces; thickened dermis with spindle cell proliferation c/w dialysis related nephrogenic fibrosing dermopathy (arrows); trace of adherent fat; ~46 microns epidermis 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 882 531 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.979904 350099 0.977021 0.981721 0.818219 23292 1 76 0.00206922 182 0 8.03875e+07 0.0226739 454522 8.18843e+07 3.5744e+06 23320 3.99755e+07 0 0.158802 0.981721 0.803263 8.03875e+07 0.0026074 1.77127e+07 8.5411e+06 1.78285e+07 193 1.78445e+07 1.49413e+07 0.00233781 1.78322e+07 49.9827 0.00555078 0.983537 0 50.1629 GTEX-1N2DW-0326-SM-E9TK3 1 B1 4 pieces; mature adipose tissue with wide fibrous septa (dialysis related nephrogenic fibrosis); prominent vessels; one vessel with recanalization and calcium deposits (outlined) 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 890 523 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987491 442976 0.979657 0.988987 0.78959 23460 1 76 0.00202051 211 0 9.31086e+07 0.0200492 256906 9.41455e+07 3.46816e+06 23495 4.63436e+07 0 0.190066 0.988987 0.780895 9.31086e+07 0.00255587 2.07138e+07 8.49005e+06 2.08633e+07 231 2.09094e+07 1.7594e+07 0.00228779 2.07998e+07 49.8686 0.00272882 0.990483 0 50.1798 GTEX-1N2DW-0426-SM-E9TK4 1 B1 2 pieces; 60% and 10% internal fat 7.7 Muscle Muscle - Skeletal 0011907 892 521 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.990163 494315 0.98417 0.991881 0.872107 20296 1 76 0.00172321 272 0 1.00822e+08 0.0156437 1.099e+06 1.01648e+08 4.24753e+06 20311 5.02108e+07 0 0.112063 0.991881 0.865026 1.00822e+08 0.00211161 2.20203e+07 9.75537e+06 2.2185e+07 282 2.2247e+07 2.36693e+07 0.00191708 2.21111e+07 49.8468 0.0108119 0.9936 0 50.1863 GTEX-1N2DW-0726-SM-DTX97 1 B1 2 fragmented pieces of lobulated mature adipose tissue 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 904 509 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989544 1.04494e+06 0.980049 0.991674 0.753799 23850 1 76 0.00211807 192 0 9.26417e+07 0.0195033 438869 9.34195e+07 4.39276e+06 23881 4.60214e+07 0 0.22625 0.991674 0.747523 9.26417e+07 0.00261306 2.08002e+07 9.43998e+06 2.07139e+07 212 2.10482e+07 1.56464e+07 0.00236503 2.06568e+07 49.5308 0.00469783 0.993804 0 49.8961 GTEX-1N2DW-1126-SM-EVR59 1 B1 2 pieces; marked congestion; thick walled large vessels (arrows); couple of bronchioles (outlined) 6.6 Lung Lung 0008952 933 480 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986033 101229 0.979407 0.987832 0.78195 22720 1 76 0.002325 141 0 6.66009e+07 0.020283 541590 6.74213e+07 5.26266e+06 22739 3.31474e+07 0 0.197457 0.987832 0.772435 6.66009e+07 0.00351441 1.48899e+07 1.04303e+07 1.49891e+07 156 1.49536e+07 1.04855e+07 0.00291862 1.50389e+07 50.1423 0.00803292 0.989631 0 50.166 GTEX-1N2DW-1426-SM-EV7AZ 1 B1 6 pieces; squamous mucosa up to 0.4mm; submucosal glands (outlined) 6.2 Esophagus Esophagus - Mucosa 0006920 945 468 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.985232 328814 0.975004 0.986777 0.769027 22830 1 76 0.00246989 145 0 7.44949e+07 0.0247647 657883 7.54931e+07 8.40117e+06 22854 3.70731e+07 0 0.205977 0.986777 0.758858 7.44949e+07 0.00441753 1.6766e+07 9.97163e+06 1.68999e+07 161 1.68803e+07 1.26852e+07 0.00344218 1.69043e+07 50.0355 0.00871448 0.988322 0 50.1989 GTEX-1N2DW-1826-SM-EAZ54 1 B1 4 pieces; end stage renal disease 5.6 Kidney Kidney - Cortex 0001225 967 446 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.974966 182408 0.971202 0.975685 0.816696 26388 1 76 0.00216628 382 0 1.19782e+08 0.0282664 1.30689e+06 1.22768e+08 1.0884e+07 26435 5.9657e+07 0 0.154507 0.975685 0.796838 1.19782e+08 0.00296539 2.63446e+07 1.31263e+07 2.66151e+07 345 2.65161e+07 2.2508e+07 0.00256554 2.65411e+07 50.0236 0.0106453 0.976404 0 50.2554 GTEX-1N2DW-2826-SM-E9TK5 2 B1 4 pieces; focal calcifications (arrow) 5.5 Brain Brain - Cortex 0001870 1041 372 BP-79311 RNA Extraction from Paxgene-derived Lysate Plate Based 10/11/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.980667 269988 0.972015 0.982377 0.854877 22890 1 76 0.0019036 374 0 8.86246e+07 0.0277557 6.92289e+06 9.02145e+07 3.79888e+06 22907 4.41065e+07 0 0.117137 0.982377 0.839812 8.86246e+07 0.00246092 1.9512e+07 1.58351e+07 1.98217e+07 348 1.95801e+07 8.47079e+06 0.00218177 1.98697e+07 50.367 0.0767381 0.984087 0 50.3937 GTEX-1N2EE-0002-SM-DE1IR B1 Blood Whole Blood 0013756 1046 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N2EE-0002-SM-DJWWO B1 Blood Whole Blood 0013756 1046 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10394,LCSET-10559 02/03/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1N2EE-0005-SM-DKPP5 B1 7.9 Blood Whole Blood 0013756 1046 BP-64490 RNA isolation_PAXgene Blood RNA (Manual) 06/15/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.95585 480604 0.984526 0.958067 0.801783 18264 1 76 0.0025424 193 0 1.29036e+08 0.0137781 234986 1.34683e+08 1.23868e+07 18270 6.41316e+07 0 0.182743 0.958067 0.768161 1.29036e+08 0.00358849 3.07384e+07 2.44698e+08 3.09666e+07 243 3.10041e+07 3.60858e+07 0.00306424 3.09888e+07 49.9877 0.00174473 0.960283 0 50.1849 GTEX-1N2EE-0011-R11b-SM-EXOIJ B1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 1049 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989866 559940 0.955162 0.992024 0.772285 24750 1 76 0.00220066 273 0 1.18312e+08 0.0442709 1.4107e+06 1.19263e+08 6.82853e+06 24788 5.88501e+07 0 0.182878 0.992024 0.766125 1.18312e+08 0.00351812 2.57369e+07 1.16229e+07 2.58341e+07 314 2.59343e+07 1.72302e+07 0.00285796 2.58618e+07 49.93 0.0118284 0.994183 0 50.0942 GTEX-1N2EE-0011-R3b-SM-EXURY B1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1049 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991323 581554 0.96827 0.992364 0.85819 22720 1 76 0.00199514 191 0 6.75601e+07 0.0312697 2.97107e+06 6.80799e+07 1.76271e+06 22733 3.36327e+07 0 0.110081 0.992364 0.851637 6.75601e+07 0.0025076 1.48184e+07 8.53626e+06 1.51186e+07 205 1.50511e+07 8.47596e+06 0.0022511 1.49411e+07 49.8166 0.0436409 0.993406 0 50.5015 GTEX-1N2EE-0011-R4a-SM-EXOII B1, A1 6.3 Brain Brain - Amygdala 0001876 1049 BP-80114 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.987503 310411 0.971032 0.989526 0.848533 23596 1 76 0.00257596 372 0 1.07035e+08 0.0287685 1.04648e+07 1.08168e+08 6.29642e+06 23616 5.32868e+07 0 0.122499 0.989526 0.839645 1.07035e+08 0.00365745 2.32099e+07 2.35055e+07 2.39874e+07 339 2.36441e+07 8.40691e+06 0.0031156 2.37114e+07 50.071 0.0967458 0.991549 0 50.8237 GTEX-1N2EE-0226-SM-EYYX5 0 B1 2 pieces, minimal atherosis, no adherent fat. Monckeberg medial sclerosis; rep focus delineated 8.4 Blood Vessel Artery - Tibial 0007610 1156 1043 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.983862 131080 0.974986 0.98825 0.833071 20202 1 76 0.0020987 116 0 4.84329e+07 0.0245846 135534 4.90087e+07 1.93683e+06 20211 2.40378e+07 0 0.141915 0.98825 0.823283 4.84329e+07 0.00407147 1.03346e+07 3.17841e+06 1.04477e+07 113 1.04914e+07 9.3443e+06 0.0030807 1.04906e+07 49.998 0.00276551 0.992637 0 50.2721 GTEX-1N2EE-0626-SM-E76PW 0 B1 6 pieces; no dermal fat; squamous epithelium is ~45 microns 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1165 1034 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991872 459641 0.97516 0.993278 0.768534 23701 1 76 0.00201154 186 0 8.26906e+07 0.0246156 338165 8.32502e+07 5.15466e+06 23735 4.11621e+07 0 0.206626 0.993278 0.763368 8.26906e+07 0.00295887 1.8315e+07 8.54422e+06 1.83434e+07 190 1.84394e+07 1.3701e+07 0.00248454 1.83297e+07 49.8509 0.00406203 0.994685 0 50.0386 GTEX-1N2EE-0826-SM-E6CRI 1 B1 2 pieces, spermatogenesis is present 6.6 Testis Testis 0000473 1206 993 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.989343 717138 0.923712 0.991555 0.708856 33498 1 76 0.00245454 152 0 7.70824e+07 0.0759741 605440 7.77389e+07 1.37503e+07 33568 3.83216e+07 0 0.214856 0.991555 0.70287 7.70824e+07 0.00370769 1.61173e+07 1.0846e+07 1.58619e+07 150 1.59567e+07 1.22801e+07 0.00307972 1.6174e+07 50.3383 0.00778812 0.993767 0 49.6008 GTEX-1N2EE-1026-SM-EXUS8 2 B1 2 pieces, nodular glandular/stromal hyperplasia, glandular elements moderately autolyzed 6.2 Prostate Prostate 0002367 1212 987 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.982927 180720 0.968582 0.983383 0.808115 23177 1 76 0.00208297 124 0 5.28938e+07 0.0311289 867536 5.37876e+07 2.29792e+06 23200 2.63439e+07 0 0.160468 0.983383 0.794686 5.28938e+07 0.00262725 1.1598e+07 5.08504e+06 1.18046e+07 143 1.17373e+07 7.35139e+06 0.00235498 1.1692e+07 49.9034 0.0161289 0.98384 0 50.4413 GTEX-1N2EE-1526-SM-DTXE9 1 B1 2 pieces, ~5-10% fascia/vascular elements 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1222 977 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993655 435927 0.976101 0.994315 0.831336 23385 1 76 0.00207262 174 0 7.89224e+07 0.0235002 239973 7.93737e+07 4.08710e+06 23405 3.93199e+07 0 0.144765 0.994315 0.82661 7.89224e+07 0.00238655 1.73976e+07 8.16947e+06 1.74853e+07 196 1.75336e+07 1.50232e+07 0.00222948 1.74059e+07 49.8172 0.00302333 0.994975 0 50.1257 GTEX-1N2EE-2126-SM-E8VNN 1 B1 2 pieces, stromal and ductal (rep encircled) gynecomastoid hyperplasia. Pascinian corpuscle ensquared 7.2 Breast Breast - Mammary Tissue 0008367 1233 966 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.977762 410688 0.974982 0.979077 0.802005 24158 1 76 0.00181771 184 0 8.19574e+07 0.0246775 354130 8.37089e+07 4.89143e+06 24192 4.07826e+07 0 0.172977 0.979077 0.785225 8.19574e+07 0.00262498 1.8048e+07 7.82801e+06 1.82446e+07 191 1.81931e+07 1.5554e+07 0.0022208 1.82112e+07 50.0248 0.00423049 0.980391 0 50.2707 GTEX-1N2EE-2426-SM-EXOIO 1 B1 6 pieces, squamous mucosa up to ~0.3mm, ~20-25% of thickness. Submucosal mucus glands present, rep encircled 8.3 Esophagus Esophagus - Mucosa 0006920 1239 960 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.987512 183076 0.979857 0.989186 0.767678 21129 1 76 0.00223917 135 0 6.33974e+07 0.019882 882366 6.40905e+07 3.7547e+06 21148 3.15616e+07 0 0.212179 0.989186 0.759377 6.33974e+07 0.00328947 1.44636e+07 8.27159e+06 1.45062e+07 140 1.45031e+07 1.11829e+07 0.00276343 1.4568e+07 50.1116 0.0137675 0.99086 0 50.0736 GTEX-1N2EE-2926-SM-DPRYC 1 B1 1 piece; mainly adenohypophysis; ~6x3.5mm nubbin of neurohypophysis, delineated 9.5 Pituitary Pituitary 0000007 1261 938 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993878 470117 0.949985 0.994764 0.768268 24344 1 76 0.0019521 124 0 6.16464e+07 0.0497385 161221 6.19709e+07 3.64236e+06 24372 3.07104e+07 0 0.181717 0.994764 0.764245 6.16464e+07 0.00267276 1.25916e+07 1.45103e+07 1.28067e+07 135 1.28106e+07 1.10422e+07 0.00231211 1.26427e+07 49.6701 0.00260156 0.99565 0 50.4234 GTEX-1N2EF-0002-SM-DE1NA B1 Blood Whole Blood 0013756 600 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10231 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N2EF-0002-SM-DJWYQ B1 Blood Whole Blood 0013756 600 BP-64493 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1N2EF-0005-SM-CXZIL B1 7.8 Blood Whole Blood 0013756 600 BP-64490 RNA isolation_PAXgene Blood RNA (Manual) 06/15/2015 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.990419 526908 0.978773 0.991883 0.789511 20637 1 76 0.00216385 195 0 1.06743e+08 0.0207736 488231 1.07616e+08 6.43807e+06 20660 5.31699e+07 0 0.189262 0.991883 0.783102 1.06743e+08 0.0031999 2.41228e+07 6.35751e+07 2.45243e+07 214 2.45371e+07 2.31943e+07 0.00268111 2.42741e+07 49.7306 0.00453678 0.993347 0 50.4127 GTEX-1N2EF-0226-SM-EYYXB 1 B1 6 pieces; well trimmed; 10% dermal fat; TRF indicates skin, leg 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 615 653 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986439 192874 0.979105 0.989569 0.794704 23682 1 76 0.00222977 290 0 9.44088e+07 0.0206468 540384 9.5404e+07 3.64581e+06 23716 4.69599e+07 0 0.184401 0.989569 0.786414 9.44088e+07 0.00337232 2.08387e+07 8.41007e+06 2.1035e+07 265 2.11085e+07 1.75625e+07 0.00279924 2.10465e+07 49.9265 0.00566417 0.992699 0 50.2344 GTEX-1N2EF-0326-SM-EYYXC 1 B1 2 pieces; minimal plaque; well trimmed 5.5 Blood Vessel Artery - Tibial 0007610 617 651 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984981 103386 0.976026 0.987205 0.796493 20514 1 76 0.00212925 160 0 7.46957e+07 0.0237093 759325 7.56638e+07 2.79584e+06 20533 3.7173e+07 0 0.179533 0.987205 0.786302 7.46957e+07 0.00302671 1.62426e+07 5.48296e+06 1.63749e+07 181 1.63542e+07 1.24365e+07 0.00257697 1.64222e+07 50.1038 0.0100355 0.98943 0 50.2028 GTEX-1N2EF-0526-SM-E76OK 1 B1 2 pieces; 40 & 10% internal & external fat 7.3 Muscle Muscle - Skeletal 0011907 619 649 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.989891 693040 0.981133 0.991281 0.859596 21901 1 76 0.00163183 378 0 1.18248e+08 0.0185931 1.03364e+06 1.19288e+08 6.91188e+06 21921 5.89038e+07 0 0.121537 0.991281 0.852101 1.18248e+08 0.00248892 2.55204e+07 1.07597e+07 2.58764e+07 337 2.5923e+07 2.64665e+07 0.00205977 2.56195e+07 49.7056 0.00866503 0.992671 0 50.3464 GTEX-1N2EF-0626-SM-E9J32 1 B1 2 pieces; 1 has 10% stromal content 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 621 647 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.979479 346657 0.97356 0.980304 0.799715 22307 1 76 0.00186881 212 0 8.60676e+07 0.0262314 1.14298e+06 8.77968e+07 4.3238e+06 22329 4.28794e+07 0 0.173846 0.980304 0.783964 8.60676e+07 0.00269837 1.8861e+07 9.6991e+06 1.91111e+07 234 1.89715e+07 1.29778e+07 0.00228324 1.90747e+07 50.1357 0.0130185 0.981129 0 50.3293 GTEX-1N2EF-0926-SM-E8VNW 1 B1 2 pieces; low stromal content 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 627 641 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988463 751560 0.979581 0.989901 0.800635 22862 1 76 0.0017656 211 0 9.37933e+07 0.0201428 645503 9.47502e+07 4.91973e+06 22905 4.66976e+07 0 0.178945 0.989901 0.79255 9.37933e+07 0.00235597 2.06895e+07 8.23609e+06 2.09005e+07 225 2.08824e+07 1.77146e+07 0.00206036 2.08427e+07 49.9524 0.00681268 0.991339 0 50.2537 GTEX-1N2EF-1426-SM-EXUSH 2 B1 6 pieces; glomeruli in better shape than tubules; no sign of chronic disease 6.2 Kidney Kidney - Cortex 0001225 636 632 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.988824 382657 0.980125 0.989751 0.828036 21503 1 76 0.00187188 154 0 6.60689e+07 0.0197318 8.44743e+06 6.67531e+07 2.29403e+06 21523 3.28882e+07 0 0.152088 0.989751 0.81955 6.60689e+07 0.00244657 1.48588e+07 7.61619e+06 1.52482e+07 201 1.51679e+07 6.92734e+06 0.00215895 1.49882e+07 49.7022 0.126548 0.990678 0 50.6466 GTEX-1N2EF-1526-SM-EXOIY 2 B1 2 pieces; moderately congested; capsule included in 1 piece [arrowed] 5.9 Spleen Spleen 0002106 637 631 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.965932 224417 0.962667 0.967702 0.750316 25227 1 76 0.00297578 273 0 9.85586e+07 0.0353961 2.46009e+06 1.01848e+08 6.05656e+06 25266 4.89112e+07 0 0.212351 0.967702 0.726082 9.85586e+07 0.00447437 2.1738e+07 2.12408e+07 2.19785e+07 270 2.19157e+07 1.275e+07 0.0037237 2.19692e+07 50.0609 0.0241545 0.969472 0 50.2751 GTEX-1N2EF-1726-SM-EXUSI 1 B1 6 pieces; portion of autolyzed mucosa in 1 piece [circled]; variable amounts of submucosa in 5 pieces up to 25% area 6.8 Colon Colon - Sigmoid 0001159 645 623 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991203 354144 0.969611 0.991639 0.801895 20657 1 76 0.00170108 135 0 6.38923e+07 0.03017 544015 6.4431e+07 2.03568e+06 20674 3.18382e+07 0 0.167715 0.991639 0.795191 6.38923e+07 0.00226712 1.37566e+07 8.15654e+06 1.3908e+07 151 1.38709e+07 1.1151e+07 0.00198397 1.38293e+07 49.9249 0.00844337 0.992075 0 50.2737 GTEX-1N2EF-1926-SM-DTX8M 2 B1 6 pieces; mucosa severely autolyzed; muscularis moderately autolyzed 8.2 Colon Colon - Transverse 0001157 653 615 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991313 857813 0.977628 0.993324 0.806097 22391 1 76 0.00190218 157 0 7.70842e+07 0.0221164 501855 7.76023e+07 3.71593e+06 22412 3.83205e+07 0 0.171532 0.993324 0.800715 7.70842e+07 0.00231344 1.69989e+07 5.93412e+06 1.69556e+07 176 1.72043e+07 1.46241e+07 0.0021074 1.68954e+07 49.547 0.00646702 0.995335 0 49.9363 GTEX-1N2EF-2126-SM-DPRYL 2 B1 2 pieces; 40% external fat on 1; 10% fat & large duct on other 6.1 Pancreas Pancreas 0001150 656 612 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.993679 234390 0.971708 0.994694 0.776616 22077 1 76 0.00265353 127 0 7.45037e+07 0.0281429 346106 7.49011e+07 3.66562e+06 22101 3.71198e+07 0 0.195092 0.994694 0.772495 7.45037e+07 0.00286613 1.68164e+07 1.27001e+07 1.69629e+07 131 1.6956e+07 1.74059e+07 0.00275972 1.69036e+07 49.9225 0.00462084 0.995709 0 50.2169 GTEX-1N2EF-2226-SM-E9J33 1 B1 2 pieces; fibrofatty tissue without mammary ducts 6 Breast Breast - Mammary Tissue 0008367 657 611 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.971884 456169 0.972961 0.972772 0.826166 21903 1 76 0.00186476 377 0 1.04502e+08 0.0267813 2.19059e+06 1.07427e+08 5.64978e+06 21925 5.20635e+07 0 0.146794 0.972772 0.803672 1.04502e+08 0.00262169 2.29437e+07 1.92935e+07 2.3324e+07 358 2.31551e+07 1.77534e+07 0.00224288 2.32193e+07 50.0692 0.0203915 0.97366 0 50.411 GTEX-1N2EF-2326-SM-DTXEE 2 B1 6 pieces; small [10%] mucosal remnant on 1 piece [circled] 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 658 610 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994074 582889 0.977347 0.995013 0.847578 22233 1 76 0.00188081 278 0 1.00607e+08 0.0224025 1.00066e+06 1.01111e+08 5.39045e+06 22258 5.01199e+07 0 0.129768 0.995013 0.843352 1.00607e+08 0.00249207 2.19296e+07 8.64639e+06 2.21164e+07 306 2.20961e+07 1.9848e+07 0.00218615 2.20456e+07 49.9428 0.00989661 0.995952 0 50.212 GTEX-1N2EF-2826-SM-E6CQF 1 B1 2 pieces; 1x2mm focal hemorrhage at 1 corner 5.7 Heart Heart - Left Ventricle 0006566 665 603 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991949 265818 0.985427 0.994041 0.858227 19676 1 76 0.00222904 265 0 7.67703e+07 0.0144545 5.05783e+06 7.72305e+07 1.25244e+07 19687 3.82026e+07 0 0.1272 0.994041 0.853113 7.67703e+07 0.00340371 1.69635e+07 1.2478e+07 1.74782e+07 264 1.74587e+07 8.13790e+06 0.00281514 1.70762e+07 49.4463 0.0654901 0.996133 0 50.7471 GTEX-1N2EF-3026-SM-E6CRJ 2 B1 1 piece of partly fragmented adenohypophysis 5.9 Pituitary Pituitary 0000007 669 599 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990456 598680 0.964221 0.992626 0.752752 24122 1 76 0.00240327 138 0 7.02153e+07 0.0355602 530064 7.07369e+07 1.28163e+07 24155 3.49056e+07 0 0.211469 0.992626 0.747202 7.02153e+07 0.00362043 1.53079e+07 8.95626e+06 1.5243e+07 160 1.52885e+07 1.01159e+07 0.00301052 1.54031e+07 50.1868 0.00749346 0.994796 0 49.8937 GTEX-1N5O9-0004-SM-DE1KM B1 Blood Whole Blood 0013756 867 BP-64650 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N5O9-0004-SM-DJWYY B1 Blood Whole Blood 0013756 867 BP-64650 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/18/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1N5O9-0006-SM-DKPPS B1 8.7 Blood Whole Blood 0013756 867 BP-64649 RNA isolation_PAXgene Blood RNA (Manual) 06/18/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989132 1.09382e+06 0.962959 0.991232 0.759527 19584 1 76 0.00324142 143 0 9.84269e+07 0.0363211 555958 9.92975e+07 1.00453e+07 19603 4.89512e+07 0 0.203432 0.991232 0.752868 9.84269e+07 0.00370904 2.20946e+07 8.95911e+07 2.23285e+07 167 2.23450e+07 2.08034e+07 0.00347474 2.23034e+07 49.9533 0.00559891 0.993333 0 50.2632 GTEX-1N5O9-0526-SM-E8VNB 1 C1 2 pieces; atherosclerotic intimal plaque up to 0.66mm; patent lumen; early medial calcifications (arrows); internal elastic lamina with small red blood cells aggregates (outlined); up to 1.25mm attached adventitia 7.3 Blood Vessel Artery - Tibial 0007610 1003 962 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.987835 404582 0.975826 0.98884 0.823236 22355 1 76 0.00170101 221 0 9.0456e+07 0.0237522 428906 9.14768e+07 4.72817e+06 22385 4.50526e+07 0 0.15259 0.98884 0.814049 9.0456e+07 0.00219071 1.96397e+07 7.93466e+06 1.97472e+07 252 1.97053e+07 1.6975e+07 0.00194561 1.97692e+07 50.081 0.00468868 0.989845 0 50.1365 GTEX-1N5O9-0926-SM-E9J3C 1 C1 6 pieces; essentially well trimmed hair bearing skin; trace of internal (periadnexal) fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1051 914 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987373 1.16548e+06 0.950531 0.988388 0.750606 24995 1 76 0.0019296 291 0 1.0423e+08 0.0492227 520267 1.05455e+08 5.03921e+06 25033 5.19282e+07 0 0.199925 0.988388 0.741891 1.0423e+08 0.00270613 2.24345e+07 3.57387e+07 2.28275e+07 267 2.27722e+07 1.70745e+07 0.00231747 2.26192e+07 49.8315 0.00493355 0.989404 0 50.4342 GTEX-1N5O9-1026-SM-DTX8Y 1 C1 2 pieces; interstitial fibrosis with micronodularity; 15% and 5% external fat 6.8 Thyroid Thyroid 0002046 1052 913 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990636 858432 0.973021 0.992467 0.808551 23402 1 76 0.0020138 162 0 7.72035e+07 0.0265661 241206 7.77895e+07 3.33922e+06 23432 3.8375e+07 0 0.16447 0.992467 0.80246 7.72035e+07 0.0023925 1.70872e+07 8.1366e+06 1.70856e+07 174 1.7329e+07 1.5326e+07 0.0022028 1.69805e+07 49.4921 0.00310075 0.994297 0 49.9977 GTEX-1N5O9-1126-SM-DTXEQ 1 C1 2 pieces; mature adipose tissue with fibrovascular component: a few larger vessels and nerves (outlined); no ducts identified in these sections 7.5 Breast Breast - Mammary Tissue 0008367 1053 912 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992667 795717 0.968065 0.99376 0.722623 25068 1 76 0.00218448 176 0 8.77203e+07 0.0316353 397100 8.82711e+07 4.3659e+06 25114 4.36666e+07 0 0.245442 0.99376 0.718114 8.77203e+07 0.00284355 1.93618e+07 8.3916e+06 1.93655e+07 192 1.95058e+07 1.34586e+07 0.00251365 1.9313e+07 49.7517 0.00449864 0.994853 0 50.0047 GTEX-1N5O9-2026-SM-DTXA6 1 C1 6 pieces; well trimmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 1077 888 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989588 408379 0.973888 0.991581 0.790525 22367 1 76 0.00225292 164 0 6.83414e+07 0.0259162 2.50097e+06 6.89216e+07 3.3746e+06 22389 3.39729e+07 0 0.183364 0.991581 0.783869 6.83414e+07 0.00267312 1.5118e+07 7.05299e+06 1.52707e+07 192 1.53924e+07 7.42827e+06 0.0024626 1.51201e+07 49.5538 0.0362872 0.993573 0 50.2512 GTEX-1N5O9-2226-SM-E8VMN 1 C1 6 pieces; target muscularis; 2 pieces with adherent fat up to ~1mm 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1078 887 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98479 424120 0.973459 0.986102 0.773487 22214 1 76 0.00188605 156 0 7.42396e+07 0.0263369 1.17854e+06 7.5286e+07 3.7754e+06 22236 3.69664e+07 0 0.199971 0.986102 0.762737 7.42396e+07 0.00250088 1.61097e+07 5.67833e+06 1.62391e+07 183 1.61831e+07 1.04294e+07 0.00219306 1.62586e+07 50.1164 0.0156541 0.987414 0 50.2 GTEX-1N5O9-2726-SM-E76QH 2 C1 6 pieces; moderate to severe autolysis of mucosa, preserved muscularis; congestion; 6.2 Colon Colon - Transverse 0001157 1094 871 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99226 247940 0.968779 0.993781 0.796207 24204 1 76 0.00197323 199 0 8.08657e+07 0.0308041 1.21201e+06 8.13717e+07 5.12999e+06 24233 4.0263e+07 0 0.172572 0.993781 0.791256 8.08657e+07 0.00301384 1.75929e+07 6.9011e+06 1.76979e+07 207 1.77108e+07 1.23594e+07 0.00249274 1.76954e+07 49.9783 0.0148948 0.995303 0 50.1488 GTEX-1N5O9-2826-SM-E6CQI 2 C1 1 piece; adenohypophysis and outlined neurohypophysis; ~2mm cystic structure; congestion 7 Pituitary Pituitary 0000007 1107 858 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990889 731811 0.960709 0.992738 0.714086 26017 1 76 0.00250326 147 0 8.04612e+07 0.0389856 330186 8.10498e+07 1.35605e+07 26071 4.00013e+07 0 0.246623 0.992738 0.708901 8.04612e+07 0.00358027 1.75215e+07 8.25417e+06 1.73026e+07 169 1.73909e+07 1.15648e+07 0.00304076 1.75714e+07 50.2581 0.00407387 0.994587 0 49.6857 GTEX-1N5O9-2926-SM-EXUSN 2 C1 4 pieces; congested meninges with calcifications (arrows) 6.4 Brain Brain - Cortex 0001870 1108 857 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.988219 321077 0.969474 0.989896 0.844805 23045 1 76 0.00224728 199 0 7.19539e+07 0.0302441 4.77161e+06 7.26884e+07 2.84199e+06 23062 3.58032e+07 0 0.124668 0.989896 0.836269 7.19539e+07 0.00278516 1.58831e+07 8.97152e+06 1.61164e+07 234 1.59877e+07 7.29046e+06 0.00251577 1.61046e+07 50.1821 0.0656447 0.991573 0 50.3646 GTEX-1N7R6-0003-SM-DE1K9 B1 Blood Whole Blood 0013756 -46 BP-64725 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1N7R6-0003-SM-DJWYN B1 Blood Whole Blood 0013756 -46 BP-64725 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1NHNU-0004-SM-DE1K3 C1 Blood Whole Blood 0013756 -499 BP-64955 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/29/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1NHNU-0004-SM-DJWXE C1 Blood Whole Blood 0013756 -499 BP-64955 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/29/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1NHNU-0005-SM-DKPP3 C1 7.2 Blood Whole Blood 0013756 -499 BP-64953 RNA isolation_PAXgene Blood RNA (Manual) 06/29/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.980522 846321 0.968041 0.98262 0.813905 18118 1 76 0.00320431 270 0 1.37167e+08 0.0307873 206777 1.39593e+08 1.48832e+07 18126 6.82194e+07 0 0.154136 0.98262 0.79976 1.37167e+08 0.003746 3.14368e+07 1.61364e+08 3.18366e+07 294 3.19244e+07 3.52856e+07 0.00347458 3.1634e+07 49.7715 0.00148128 0.984718 0 50.3159 GTEX-1NHNU-0626-SM-E6CP1 1 B1 2 pieces; 10% fat content in 1 piece 7.7 Heart Heart - Atrial Appendage 0006631 221 1373 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992632 362996 0.980752 0.994544 0.859443 21019 1 76 0.00233053 267 0 8.51794e+07 0.0189721 3.29222e+06 8.56467e+07 1.42158e+07 21033 4.23912e+07 0 0.121308 0.994544 0.854754 8.51794e+07 0.00334136 1.86437e+07 1.28533e+07 1.88688e+07 263 1.87362e+07 1.3136e+07 0.00283497 1.88633e+07 50.169 0.0384396 0.996456 0 50.3 GTEX-1NHNU-0926-SM-E9J2T 1 B1 2 pieces; fibroadipose tissue without mammary ducts 6 Breast Breast - Mammary Tissue 0008367 276 1318 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.983733 394220 0.977475 0.98446 0.854691 22081 1 76 0.0018594 215 0 8.69566e+07 0.0222434 905939 8.83292e+07 3.73779e+06 22097 4.33381e+07 0 0.122784 0.98446 0.841409 8.69566e+07 0.0025452 1.90838e+07 7.45473e+06 1.93521e+07 237 1.9197e+07 1.6185e+07 0.00220205 1.93053e+07 50.1406 0.0102564 0.985187 0 50.3491 GTEX-1NHNU-1026-SM-E9J2A 1 B1 6 pieces; well trimmed; <5% dermal fat; 36um thick epidermis 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 286 1308 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.983293 1.47009e+06 0.926977 0.984133 0.747572 24356 1 76 0.00193623 225 0 9.79663e+07 0.0727691 954393 9.95458e+07 5.00981e+06 24390 4.88087e+07 0 0.179406 0.984133 0.73571 9.79663e+07 0.00264992 2.04139e+07 5.33877e+07 2.08851e+07 240 2.07718e+07 1.51144e+07 0.00229277 2.06664e+07 49.8729 0.00958748 0.984974 0 50.5705 GTEX-1NHNU-1126-SM-E9J2C 1 B1 2 pieces; 5 & 10% fibrovascular & neural content 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 287 1307 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985825 500381 0.974098 0.986588 0.811234 22691 1 76 0.00193672 182 0 8.02708e+07 0.0255991 283020 8.13621e+07 4.34201e+06 22717 3.9981e+07 0 0.162863 0.986588 0.800354 8.02708e+07 0.00266571 1.75349e+07 8.39294e+06 1.77264e+07 191 1.76244e+07 1.52837e+07 0.00230093 1.77072e+07 50.1172 0.00347853 0.987351 0 50.2715 GTEX-1NHNU-1226-SM-DTX8I 1 B1 2 pieces; 5 & 20% internal fat content 8.3 Muscle Muscle - Skeletal 0011907 288 1306 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992683 890645 0.982069 0.994648 0.891957 19818 1 76 0.00179817 381 0 1.0445e+08 0.017691 2.10118e+06 1.05012e+08 4.38314e+06 19827 5.1978e+07 0 0.0901129 0.994648 0.887183 1.0445e+08 0.0021278 2.29952e+07 1.02692e+07 2.32998e+07 332 2.3452e+07 2.27182e+07 0.00196266 2.30196e+07 49.5348 0.020009 0.996612 0 50.329 GTEX-1NHNU-1326-SM-E9J2D 1 B1 2 pieces; well trimmed; no plaques 5.8 Blood Vessel Artery - Tibial 0007610 298 1296 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.951354 345688 0.974191 0.951942 0.876641 22017 1 76 0.00175177 383 0 1.24797e+08 0.0253549 912834 1.31098e+08 6.54711e+06 22030 6.21602e+07 0 0.0975496 0.951942 0.834512 1.24797e+08 0.00255583 2.64919e+07 1.43862e+07 2.69179e+07 404 2.66268e+07 2.71839e+07 0.00215355 2.68847e+07 50.2409 0.00696301 0.952531 0 50.3988 GTEX-1NHNU-1426-SM-E8VMC 1 B1 2 pieces; up to 0.7mm external fat 7.1 Nerve Nerve - Tibial 0001323 300 1294 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.985028 711604 0.967642 0.986413 0.76852 24215 1 76 0.00185718 223 0 9.12823e+07 0.0320737 325527 9.25397e+07 5.02639e+06 24259 4.54372e+07 0 0.199122 0.986413 0.758078 9.12823e+07 0.00267198 1.99867e+07 8.03392e+06 2.01427e+07 222 2.00776e+07 1.51072e+07 0.00226401 2.0176e+07 50.1222 0.0035177 0.987797 0 50.1944 GTEX-1NHNU-1526-SM-E6CP2 1 B1 2 pieces; spermatogenesis 6.2 Testis Testis 0000473 549 1045 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990386 465430 0.933958 0.992138 0.722376 31302 1 76 0.0024717 140 0 7.10366e+07 0.0657729 948575 7.15995e+07 1.29256e+07 31356 3.53295e+07 0 0.211582 0.992138 0.716697 7.10366e+07 0.00335568 1.51815e+07 9.28343e+06 1.49665e+07 144 1.50151e+07 1.12074e+07 0.00291291 1.52409e+07 50.3732 0.0132484 0.993891 0 49.6434 GTEX-1NHNU-1726-SM-E76R1 1 B1 6 pieces; well dissected muscularis 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 553 1041 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99289 450867 0.974558 0.994458 0.819065 22840 1 76 0.00194794 197 0 8.42247e+07 0.0251794 660117 8.46941e+07 5.66408e+06 22864 4.19411e+07 0 0.155493 0.994458 0.814526 8.42247e+07 0.00297947 1.83197e+07 6.96285e+06 1.84529e+07 212 1.8463e+07 1.46131e+07 0.00246289 1.84306e+07 49.9562 0.00779413 0.996025 0 50.1812 GTEX-1NHNU-2326-SM-E6CQE 1 B1 6 pieces; well preserved mucosa & muscle 7 Colon Colon - Transverse 0001157 576 1018 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991948 367536 0.973903 0.993777 0.833257 23511 1 76 0.00249661 169 0 7.99469e+07 0.0254575 669545 8.04475e+07 1.40427e+07 23531 3.97719e+07 0 0.140645 0.993777 0.828072 7.99469e+07 0.00347284 1.76228e+07 8.11413e+06 1.74947e+07 199 1.74961e+07 1.37768e+07 0.00298383 1.77532e+07 50.3648 0.00832276 0.995607 0 49.8176 GTEX-1NSGN-0001-SM-DE1JW B1 Blood Whole Blood 0013756 -44 BP-65051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1NSGN-0001-SM-DJWYW B1 Blood Whole Blood 0013756 -44 BP-65051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1NSGN-0005-SM-DKPPX B1 8.9 Blood Whole Blood 0013756 -44 BP-65050 RNA isolation_PAXgene Blood RNA (Manual) 07/02/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.988219 650251 0.966976 0.990111 0.799753 20848 1 76 0.00310238 273 0 1.18703e+08 0.0323224 315521 1.19888e+08 1.20159e+07 20871 5.90902e+07 0 0.167223 0.990111 0.791844 1.18703e+08 0.0033051 2.67822e+07 9.98065e+07 2.69676e+07 273 2.7074e+07 2.7125e+07 0.00320355 2.68943e+07 49.8335 0.00263179 0.992003 0 50.1725 GTEX-1NSGN-0526-SM-E9J34 1 C1 2 pieces; patent vessels; 0.5mm and 1mm attached adventitia 7.4 Blood Vessel Artery - Tibial 0007610 412 1236 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.98496 602920 0.973737 0.98581 0.858044 21150 1 76 0.00189574 213 0 9.20721e+07 0.0258557 365517 9.33974e+07 4.55242e+06 21163 4.58586e+07 0 0.115693 0.98581 0.845868 9.20721e+07 0.00273864 1.95321e+07 9.05074e+06 1.98061e+07 234 1.96495e+07 1.84798e+07 0.00231683 1.97746e+07 50.1586 0.00391357 0.98666 0 50.3483 GTEX-1NSGN-0626-SM-E9J35 1 C1 2 pieces; well trimmed salivary gland; second piece represents adipose tissue with fibrovascular component 6.1 Salivary Gland Minor Salivary Gland 0006330 413 1235 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.956303 400538 0.978595 0.957305 0.871737 24580 1 76 0.00227658 383 0 1.23547e+08 0.0204624 595136 1.29057e+08 6.71749e+06 24600 6.14606e+07 0 0.106858 0.957305 0.834518 1.23547e+08 0.0031299 2.72859e+07 1.42905e+07 2.76691e+07 395 2.74722e+07 2.61667e+07 0.0027028 2.7629e+07 50.1423 0.00461142 0.958308 0 50.3486 GTEX-1NSGN-0726-SM-DTXEF 1 C1 6 pieces; well trimmed hair bearing skin; periadnexal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 424 1224 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993794 837390 0.975058 0.994743 0.826157 23254 1 76 0.00221698 233 0 9.24858e+07 0.02469 717183 9.29745e+07 4.74176e+06 23275 4.60645e+07 0 0.148902 0.994743 0.821814 9.24858e+07 0.00260063 2.03563e+07 1.15859e+07 2.04565e+07 249 2.05412e+07 1.6351e+07 0.00240862 2.03579e+07 49.776 0.00771376 0.995692 0 50.1228 GTEX-1NSGN-1126-SM-EXUR3 1 C1 6 pieces; up to 0.75mm attached adventitia 7.6 Blood Vessel Artery - Aorta 0001496 434 1214 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992427 589481 0.977359 0.992902 0.832111 21260 1 76 0.00186059 134 0 6.24217e+07 0.0222245 148135 6.28679e+07 1.88076e+06 21271 3.1079e+07 0 0.145248 0.992902 0.826205 6.24217e+07 0.00252949 1.34931e+07 3.7929e+06 1.35624e+07 151 1.35404e+07 1.19947e+07 0.00219488 1.35471e+07 50.0124 0.00235629 0.993378 0 50.128 GTEX-1NSGN-1226-SM-E76OL 1 C1 2 pieces; small lymphoid aggregates (outlined) 7.1 Heart Heart - Atrial Appendage 0006631 436 1212 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.990327 749320 0.97447 0.992432 0.830985 22384 1 76 0.00234565 141 0 6.75885e+07 0.0252451 1.00059e+06 6.81039e+07 4.68541e+06 22402 3.35705e+07 0 0.143485 0.992432 0.824697 6.75885e+07 0.00367195 1.47789e+07 7.31167e+06 1.48176e+07 170 1.50231e+07 1.10631e+07 0.00300739 1.46961e+07 49.4498 0.0146921 0.994538 0 50.0653 GTEX-1NSGN-1626-SM-EXOJF 1 C1 2 pieces; marked congestion: anthracosis; 8.1 Lung Lung 0008952 453 1195 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.980978 162895 0.970974 0.983239 0.728622 22143 1 76 0.00260647 114 0 4.89993e+07 0.0286067 236392 4.98345e+07 2.98079e+06 22170 2.43421e+07 0 0.242352 0.983239 0.71641 4.89993e+07 0.00426155 1.08522e+07 3.71261e+06 1.09548e+07 120 1.09223e+07 7.47588e+06 0.00343211 1.09863e+07 50.146 0.00474354 0.9855 0 50.2352 GTEX-1NSGN-1726-SM-EXOJG 1 C1 2 pieces; well preserved parenchyma and Langerhans islets (rep outlined); ~20% and 10% attached fat 6.6 Pancreas Pancreas 0001150 455 1193 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.988058 359728 0.975639 0.990032 0.823952 23511 1 76 0.00226181 165 0 9.89357e+07 0.0241648 275078 9.99318e+07 6.0025e+06 23541 4.92471e+07 0 0.151687 0.990032 0.815739 9.89357e+07 0.0034183 2.23795e+07 1.71768e+07 2.26322e+07 180 2.26444e+07 2.52427e+07 0.0028389 2.25527e+07 49.8986 0.00275266 0.992007 0 50.2807 GTEX-1NSGN-1826-SM-EXOJH 1 C1 6 pieces; essentially well trimmed target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 463 1185 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98336 231546 0.963913 0.985426 0.789319 23209 1 76 0.00229369 174 0 8.12349e+07 0.0357961 537582 8.24364e+07 4.87018e+06 23234 4.0393e+07 0 0.174594 0.985426 0.777815 8.12349e+07 0.00381413 1.73892e+07 6.0177e+06 1.75006e+07 189 1.74283e+07 1.34882e+07 0.00305232 1.76074e+07 50.2556 0.00652117 0.987491 0 50.1597 GTEX-1NSGN-1926-SM-E9J36 1 C1 6 pieces; two pieces devoid of gastric mucosa; well preserved muscularis 8 Stomach Stomach 0000945 473 1175 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.982029 375891 0.97629 0.982892 0.867322 22385 1 76 0.00194384 205 0 8.39958e+07 0.0233682 506687 8.54578e+07 4.32778e+06 22396 4.18433e+07 0 0.108968 0.982892 0.852484 8.39958e+07 0.00284849 1.81903e+07 7.33595e+06 1.84399e+07 209 1.82714e+07 1.71507e+07 0.00239577 1.84358e+07 50.2239 0.00592909 0.983756 0 50.3407 GTEX-1NSGN-2026-SM-DPRYM 1 C1 6 pieces; several submucosal glands (outlined); ~400 microns stratified squamous epithelium 9.6 Esophagus Esophagus - Mucosa 0006920 469 1179 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.991625 276001 0.982739 0.992687 0.873935 19414 1 76 0.00297428 171 0 7.62077e+07 0.0163006 293751 7.67691e+07 3.60747e+06 19422 3.79555e+07 0 0.108804 0.992687 0.867544 7.62077e+07 0.00300859 1.73116e+07 1.47011e+07 1.73911e+07 172 1.74073e+07 1.79215e+07 0.00299142 1.73741e+07 49.9522 0.00382642 0.993749 0 50.1145 GTEX-1NSGN-2126-SM-DPRYN 2 C1 6 pieces; moderately to severely autolyzed mucosa and abundant lymphoid tissue 6.2 Small Intestine Small Intestine - Terminal Ileum 0001211 487 1161 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992123 115658 0.972474 0.992922 0.846832 23028 1 76 0.00244987 138 0 5.86176e+07 0.0267505 307606 5.90354e+07 3.69467e+06 23045 2.91734e+07 0 0.125642 0.992922 0.840838 5.86176e+07 0.00326027 1.28157e+07 6.83053e+06 1.29865e+07 142 1.2902e+07 1.18743e+07 0.00285474 1.29486e+07 50.0902 0.00521053 0.993722 0 50.3309 GTEX-1NSGN-2226-SM-E6CQG 1 C1 6 pieces; well trimmed target muscularis 6.8 Esophagus Esophagus - Muscularis 0004648 471 1177 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991847 495973 0.970663 0.993559 0.798065 22636 1 76 0.00253832 164 0 7.64588e+07 0.0290357 479002 7.69545e+07 1.2917e+07 22658 3.80395e+07 0 0.172598 0.993559 0.792925 7.64588e+07 0.0034307 1.66258e+07 6.62787e+06 1.63613e+07 170 1.63654e+07 1.3003e+07 0.00298374 1.67417e+07 50.5682 0.00622448 0.99527 0 49.5991 GTEX-1NSGN-2326-SM-E9U5X 2 C1 6 pieces; very focal severe mucosal autolysis; preserved muscularis 5.5 Colon Colon - Transverse 0001157 489 1159 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989693 239730 0.970354 0.990669 0.791305 23997 1 76 0.00267956 200 0 8.11165e+07 0.0286708 1.04863e+06 8.18805e+07 3.08102e+06 24031 4.04004e+07 0 0.179049 0.990669 0.783921 8.11165e+07 0.00359543 1.7988e+07 1.07504e+07 1.80487e+07 208 1.80357e+07 1.0677e+07 0.00313705 1.80657e+07 50.0417 0.0128069 0.991645 0 50.0842 GTEX-1NT2E-0826-SM-DMZ2L 1 C1 2 pieces, mildly prominent mesothelial layer. History of disseminated sepsis excludes aliquot from molecular analysis. Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 487 BP-80465 DNA Extraction from Paxgene-derived Lysate Plate Based 11/10/2016 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1NT2E-0826-SM-DO3XN 1 C1 2 pieces, mildly prominent mesothelial layer. History of disseminated sepsis excludes aliquot from molecular analysis. Adipose Tissue Adipose - Visceral (Omentum) 0010414 161 487 BP-80465 DNA Extraction from Paxgene-derived Lysate Plate Based 11/10/2016 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1NUQO-0003-SM-DE1KJ C1 Blood Whole Blood 0013756 -104 BP-65167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1NUQO-0003-SM-DJWXG C1 Blood Whole Blood 0013756 -104 BP-65167 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2015 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1NUQO-0005-SM-DKPP2 C1 8.5 Blood Whole Blood 0013756 -104 BP-65172 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.989496 2.43965e+06 0.919184 0.991752 0.751717 20192 1 76 0.00268607 158 0 9.97315e+07 0.0805827 461936 1.00561e+08 1.0694e+07 20214 4.96426e+07 0 0.167467 0.991752 0.745516 9.97315e+07 0.00306809 2.11312e+07 9.9799e+07 2.1399e+07 179 2.14355e+07 2.03747e+07 0.00287665 2.13842e+07 49.9402 0.00459359 0.994007 0 50.3148 GTEX-1NUQO-0326-SM-DTXDK 1 B1 2 pieces; patent; ~0.2mm attached adventitia 6.5 Blood Vessel Artery - Tibial 0007610 486 460 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994772 462475 0.977027 0.995576 0.868714 19401 1 76 0.00173339 141 0 6.53977e+07 0.0225426 331038 6.56882e+07 3.19794e+06 19409 3.25934e+07 0 0.108313 0.995576 0.864871 6.53977e+07 0.00214391 1.3905e+07 4.39327e+06 1.40573e+07 158 1.40522e+07 1.35508e+07 0.00193848 1.39602e+07 49.8358 0.00503953 0.996381 0 50.2724 GTEX-1NUQO-0626-SM-E6CQT 1 B1 2 pieces; adrenal cortex; one with ~20% attached fibroadipose tissue (outlined) 7.7 Adrenal Gland Adrenal Gland 0002369 494 452 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991802 611367 0.976591 0.994022 0.818019 23900 1 76 0.00207723 270 0 1.06142e+08 0.0230825 1.11644e+06 1.0678e+08 1.83449e+07 23935 5.28229e+07 0 0.158572 0.994022 0.81313 1.06142e+08 0.00327112 2.33857e+07 1.16255e+07 2.34106e+07 304 2.35661e+07 1.85335e+07 0.00267284 2.34329e+07 49.8583 0.0104555 0.996243 0 50.0266 GTEX-1NUQO-0726-SM-E9J3K 2 B1 2 pieces; mild to moderat autolysis; generalized atrophy; one contains ~15% internal/external fat, fibromuscular component and empty spaces (arrows) 8.3 Muscle Muscle - Skeletal 0011907 495 451 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.992349 680157 0.984829 0.993345 0.881797 19712 1 76 0.001504 272 0 1.02151e+08 0.0149829 779708 1.02836e+08 4.88515e+06 19725 5.09132e+07 0 0.103033 0.993345 0.875928 1.02151e+08 0.00216087 2.23049e+07 1.01591e+07 2.26218e+07 330 2.25401e+07 2.05089e+07 0.00183211 2.24742e+07 49.9268 0.00758208 0.994341 0 50.3527 GTEX-1NUQO-0826-SM-DPS16 1 B1 2 pieces; essentially well preserved parenchyma; Langerhans islets present (rep outlined); attached dense fibrous tissue with ductal structures and fibroadipose tissue with nerves (arrows) 5.6 Pancreas Pancreas 0001150 498 448 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994193 204978 0.973207 0.995141 0.799552 20360 1 76 0.00211111 107 0 5.26797e+07 0.0266018 157859 5.29369e+07 3.13758e+06 20373 2.62386e+07 0 0.173655 0.995141 0.795667 5.26797e+07 0.00307819 1.19408e+07 9.95891e+06 1.22013e+07 117 1.21192e+07 1.28244e+07 0.00259419 1.20715e+07 49.9015 0.00298202 0.996089 0 50.5395 GTEX-1NUQO-0926-SM-DTXEX 1 B1 2 pieces; mild to moderate autolysis; 40% and 30% attached skeletal muscle and fibroadipose tissue (outlined) 6.7 Thyroid Thyroid 0002046 507 439 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994202 662949 0.963754 0.994918 0.724817 24774 1 76 0.00202132 201 0 9.00809e+07 0.0359994 236416 9.0541e+07 4.5772e+06 24822 4.48834e+07 0 0.238937 0.994918 0.721133 9.00809e+07 0.00226001 1.96899e+07 8.07052e+06 1.97264e+07 207 1.98233e+07 1.35787e+07 0.00214058 1.9652e+07 49.7831 0.00261115 0.995634 0 50.0463 GTEX-1NUQO-1126-SM-DTX98 1 B1 6 pieces; stratified squamous epithelium, submucosa with couple of glands (outlined) and muscularis 9 Esophagus Esophagus - Mucosa 0006920 518 428 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990647 1.09578e+06 0.9774 0.992798 0.815075 22894 1 76 0.00184869 182 0 8.61857e+07 0.0221877 265398 8.68108e+07 3.75162e+06 22919 4.2844e+07 0 0.162324 0.992798 0.809205 8.61857e+07 0.00230837 1.95184e+07 1.01726e+07 1.94768e+07 190 1.97823e+07 1.81607e+07 0.00207803 1.93871e+07 49.4956 0.0030572 0.994949 0 49.9466 GTEX-1NUQO-1226-SM-E76PK 1 B1 6 pieces; target muscularis persent 5.6 Esophagus Esophagus - Muscularis 0004648 518 428 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992678 446555 0.97255 0.994211 0.801479 24589 1 76 0.00172972 276 0 9.2125e+07 0.027218 737995 9.26614e+07 6.09575e+06 24622 4.58784e+07 0 0.171072 0.994211 0.796839 9.2125e+07 0.00263793 2.02476e+07 7.98688e+06 2.03941e+07 259 2.04405e+07 1.52093e+07 0.00218313 2.03302e+07 49.8647 0.00796443 0.995744 0 50.1802 GTEX-1NUQO-1826-SM-E6CQU 1 B1 6 pieces; one piece completely devoid of squamous epithelium; well preserved lamina propria 7.3 Vagina Vagina 0000996 538 408 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.9905 578207 0.974489 0.992494 0.764066 24473 1 76 0.00235697 169 0 9.2092e+07 0.0252348 122136 9.27886e+07 1.62522e+07 24510 4.58224e+07 0 0.210423 0.992494 0.758331 9.2092e+07 0.00333671 2.08017e+07 1.25634e+07 2.04761e+07 195 2.05608e+07 1.7187e+07 0.00284585 2.08868e+07 50.3933 0.00131628 0.994487 0 49.6057 GTEX-1NUQO-2226-SM-E9U68 1 B1 2 pieces; 50% and 5% adipose tissue; closely packed acini consistent with lactating breast 7.5 Breast Breast - Mammary Tissue 0008367 547 399 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991176 256341 0.975222 0.992064 0.800608 22994 1 76 0.0016289 181 0 7.93338e+07 0.0245298 366745 7.99685e+07 2.9219e+06 23022 3.95524e+07 0 0.174614 0.992064 0.794254 7.93338e+07 0.0024892 1.76387e+07 6.67379e+06 1.77761e+07 183 1.76944e+07 1.57207e+07 0.00205866 1.77868e+07 50.1302 0.00458612 0.992952 0 50.1939 GTEX-1NV5F-0004-SM-DE1IO C1 Blood Whole Blood 0013756 730 BP-65250 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2015 LCSET-10232,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1NV5F-0004-SM-DJWX3 C1 Blood Whole Blood 0013756 730 BP-65250 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2015 LCSET-10394,LCSET-10559 02/03/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1NV5F-0226-SM-E8VNY 1 C1 6 pieces; well trimmed; 10% dermal fat; 28um thick epidermis 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 918 522 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.980504 530089 0.972517 0.981748 0.826219 23652 1 76 0.00170334 278 0 9.14421e+07 0.0272579 1.2099e+06 9.31421e+07 5.0281e+06 23679 4.55391e+07 0 0.146298 0.981748 0.811139 9.14421e+07 0.00240736 2.00889e+07 1.10434e+07 2.02405e+07 257 2.0174e+07 1.57918e+07 0.00205491 2.02753e+07 50.1252 0.0129898 0.982993 0 50.1879 GTEX-1NV5F-0626-SM-DTXEG 1 C1 6 pieces; well trimmed; no dermal fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 936 504 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993855 605852 0.977704 0.994764 0.831949 22162 1 76 0.00197733 299 0 1.00881e+08 0.0220003 604707 1.01412e+08 5.44713e+06 22189 5.02612e+07 0 0.145756 0.994764 0.827592 1.00881e+08 0.0024648 2.22697e+07 9.68102e+06 2.23774e+07 296 2.24706e+07 1.92068e+07 0.00222084 2.22709e+07 49.7769 0.0059629 0.995672 0 50.1206 GTEX-1NV5F-0726-SM-DTXEH 1 C1 2 pieces; multinodular 6.1 Thyroid Thyroid 0002046 944 496 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992366 462827 0.970115 0.993127 0.812824 23935 1 76 0.00202294 280 0 1.01957e+08 0.029555 545354 1.02663e+08 5.60075e+06 23964 5.0795e+07 0 0.157291 0.993127 0.807237 1.01957e+08 0.0023874 2.22731e+07 1.44671e+07 2.24475e+07 292 2.24988e+07 1.93133e+07 0.00220503 2.231e+07 49.7893 0.0053121 0.993888 0 50.1949 GTEX-1NV5F-0926-SM-DTX8N 2 C1 2 pieces; moderate diffuse alveolar fibrosis; edema and patchy pneumonia 6.4 Lung Lung 0008952 950 490 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990983 482372 0.97768 0.992851 0.790612 22968 1 76 0.00207086 175 0 8.7764e+07 0.0219722 348795 8.8396e+07 4.31231e+06 22997 4.3658e+07 0 0.187067 0.992851 0.784961 8.7764e+07 0.0025396 1.94257e+07 1.06983e+07 1.95223e+07 201 1.96099e+07 1.64518e+07 0.00230479 1.94952e+07 49.8533 0.00394582 0.994719 0 50.124 GTEX-1NV5F-1726-SM-EXOIZ 1 C1 2 pieces; all myometrium (in this cut) no endometrium 6.4 Uterus Uterus 0000995 997 443 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.979742 205562 0.964155 0.981662 0.766681 23143 1 76 0.00216748 165 0 7.78477e+07 0.0356239 476381 7.9302e+07 4.84815e+06 23176 3.8711e+07 0 0.197474 0.981662 0.752621 7.78477e+07 0.00346672 1.69154e+07 7.8542e+06 1.71614e+07 197 1.70688e+07 1.07421e+07 0.00281583 1.71559e+07 50.1272 0.00600718 0.983582 0 50.361 GTEX-1NV5F-2226-SM-DTX8O 2 C1 6 pieces; mucosa largely sloughed; muscularis intact 6.3 Colon Colon - Transverse 0001157 1010 430 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988579 707114 0.974418 0.990794 0.810872 23684 1 76 0.00210153 168 0 7.42605e+07 0.0249787 546331 7.49505e+07 3.71134e+06 23708 3.68798e+07 0 0.163546 0.990794 0.803407 7.42605e+07 0.00257463 1.62369e+07 7.61385e+06 1.62481e+07 179 1.64661e+07 1.33511e+07 0.00233755 1.61776e+07 49.5581 0.00728922 0.993009 0 50.0172 GTEX-1NV5F-2526-SM-EXUSK 1 C1 2 pieces; 5% fibrovascular content 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1014 426 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989908 201244 0.980926 0.990249 0.749198 21685 1 76 0.0019414 134 0 5.69905e+07 0.0184562 304365 5.75517e+07 1.81828e+06 21709 2.8384e+07 0 0.231728 0.990249 0.741893 5.69905e+07 0.00242606 1.27437e+07 6.34404e+06 1.28207e+07 132 1.28142e+07 9.83754e+06 0.00218365 1.27754e+07 49.9241 0.00528855 0.990591 0 50.1505 GTEX-1NV5F-3026-SM-E9U5U 1 C1 1 piece; all anterior lobe 6.5 Pituitary Pituitary 0000007 1057 383 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990245 536337 0.946649 0.991217 0.728131 24655 1 76 0.00179696 139 0 7.26553e+07 0.053121 595647 7.32991e+07 2.95832e+06 24694 3.61936e+07 0 0.218518 0.991217 0.721736 7.26553e+07 0.00274391 1.49969e+07 1.6033e+07 1.51682e+07 163 1.51533e+07 1.03702e+07 0.00226997 1.50884e+07 49.8927 0.00812625 0.99219 0 50.2839 GTEX-1NV5F-3226-SM-EXUSL 1 C1 4 pieces; 1 x 2.6mm meninges at edge of 1 piece 6.6 Brain Brain - Cortex 0001870 1060 380 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.990828 214683 0.971498 0.991664 0.843036 21518 1 76 0.00161996 141 0 5.28726e+07 0.0282846 3.94125e+06 5.3317e+07 1.76169e+06 21533 2.63462e+07 0 0.128462 0.991664 0.836008 5.28726e+07 0.00218327 1.16944e+07 8.01003e+06 1.19304e+07 171 1.18177e+07 4.70851e+06 0.00190138 1.18399e+07 50.0468 0.073921 0.992499 0 50.4995 GTEX-1NV88-0926-SM-DKTS7 1 B1 2 pieces; interstitial fibrosis with nodularity; one piece with ~50% skeletal muscles and fibrovascular tissue (outlined) History of disseminated sepsis excludes aliquot from molecular analysis. Thyroid Thyroid 0002046 1047 459 BP-80409 DNA Extraction from Paxgene-derived Lysate Plate Based 11/09/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1NV88-0926-SM-DLT2P 1 B1 2 pieces; interstitial fibrosis with nodularity; one piece with ~50% skeletal muscles and fibrovascular tissue (outlined) History of disseminated sepsis excludes aliquot from molecular analysis. Thyroid Thyroid 0002046 1047 459 BP-80409 DNA Extraction from Paxgene-derived Lysate Plate Based 11/09/2016 LCSET-10476 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1NV8Z-0003-SM-DE1IN C1 Blood Whole Blood 0013756 993 BP-65424 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/17/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1NV8Z-0003-SM-DJWX2 C1 Blood Whole Blood 0013756 993 BP-65424 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/17/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1NV8Z-0005-SM-DKPQ3 C1 7.9 Blood Whole Blood 0013756 993 BP-65436 RNA isolation_PAXgene Blood RNA (Manual) 07/17/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.960735 567328 0.982399 0.962882 0.799958 19559 1 76 0.00278198 262 0 1.37086e+08 0.0164545 317559 1.42371e+08 1.45145e+07 19572 6.81528e+07 0 0.182442 0.962882 0.770264 1.37086e+08 0.00323507 3.23677e+07 2.4365e+08 3.27482e+07 262 3.28305e+07 3.94865e+07 0.00300802 3.25648e+07 49.7968 0.00223051 0.965028 0 50.2922 GTEX-1NV8Z-1426-SM-DTX91 1 B1 6 pieces, confirmed target muscularis 6 Esophagus Esophagus - Muscularis 0004648 1283 1183 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989163 880582 0.969248 0.991373 0.800513 24068 1 76 0.0019886 370 0 1.05038e+08 0.0305555 2.5713e+06 1.05952e+08 5.09679e+06 24112 5.21997e+07 0 0.168735 0.991373 0.793607 1.05038e+08 0.0025038 2.30157e+07 1.13328e+07 2.30772e+07 395 2.33023e+07 1.18902e+07 0.00224562 2.2995e+07 49.6681 0.0242685 0.993583 0 50.0667 GTEX-1NV8Z-1526-SM-DTX8X 1 B1 2 pieces, severe interstitial fibrosis/chronic ischemic damage with microinfarcts up to ~2mm, rep encircled 6.1 Heart Heart - Left Ventricle 0006566 1282 1184 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989211 268716 0.987058 0.991736 0.845984 18929 1 76 0.00155223 366 0 7.09052e+07 0.0128802 8.03691e+06 7.14961e+07 3.02016e+06 18936 3.52436e+07 0 0.141075 0.991736 0.838993 7.09052e+07 0.00196164 1.57278e+07 2.89748e+07 1.58781e+07 349 1.60053e+07 3.25423e+06 0.00175641 1.57581e+07 49.6108 0.112411 0.994261 0 50.2377 GTEX-1NV8Z-1626-SM-DPRYT 1 B1 2 pieces, mild passive congestion 6.5 Liver Liver 0001114 1284 1182 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993979 248673 0.972491 0.994923 0.833908 20192 1 76 0.00184351 125 0 5.85228e+07 0.0273725 1.36242e+06 5.88214e+07 3.38589e+06 20204 2.91658e+07 0 0.138584 0.994923 0.829674 5.85228e+07 0.00244689 1.27796e+07 6.51076e+06 1.3057e+07 153 1.30166e+07 9.12909e+06 0.00214492 1.28653e+07 49.7077 0.023162 0.995867 0 50.5368 GTEX-1NV8Z-2026-SM-E8VMD 1 B1 6 pieces, confirmed target muscularis; focal adherent serosal fat up to ~1.6mm, rep delineated 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1295 1171 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735,LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.96169 422348 0.969123 0.963758 0.807634 24862 1 76 0.00199364 522 0 1.75918e+08 0.0305805 5.35354e+06 1.82533e+08 1.34352e+07 24913 8.74967e+07 0 0.161488 0.963758 0.778364 1.75918e+08 0.00314343 3.86698e+07 2.01462e+07 3.93647e+07 459 3.91997e+07 2.10109e+07 0.0025673 3.91773e+07 49.9858 0.0293291 0.965826 0 50.4453 GTEX-1NV8Z-2226-SM-EXOJ2 2 B1 6 pieces, moderately advanced tubular autolysis 5.9 Kidney Kidney - Cortex 0001225 1293 1173 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.971699 175185 0.967069 0.973933 0.83457 24494 1 76 0.00198135 270 0 1.02161e+08 0.0326748 4.11428e+06 1.04896e+08 6.44896e+06 24523 5.08185e+07 0 0.1325 0.973933 0.812815 1.02161e+08 0.00321225 2.24268e+07 1.01434e+07 2.30511e+07 324 2.29663e+07 1.21308e+07 0.00259539 2.27044e+07 49.7132 0.0392226 0.976168 0 50.6863 GTEX-1NV8Z-2826-SM-E8VME 0 B1 2 pieces, fibroadipose elements only 6.3 Breast Breast - Mammary Tissue 0008367 1316 1150 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.979426 253223 0.97813 0.980494 0.801223 22313 1 76 0.00187356 164 0 7.05793e+07 0.0214872 316746 7.19834e+07 4.19138e+06 22341 3.5134e+07 0 0.176906 0.980494 0.785595 7.05793e+07 0.0024533 1.55793e+07 6.68473e+06 1.57383e+07 176 1.56925e+07 1.20515e+07 0.00216311 1.57014e+07 50.014 0.00440026 0.981562 0 50.2538 GTEX-1NV8Z-2926-SM-DPRYS 1 B1 1 piece, ~4x3mm focus of neurohypophysis; rest is adenohypophysis 7.9 Pituitary Pituitary 0000007 1349 1117 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993945 431588 0.962603 0.994792 0.771783 24792 1 76 0.00200539 137 0 7.13539e+07 0.0371099 157557 7.17274e+07 4.20172e+06 24826 3.55439e+07 0 0.190819 0.994792 0.767764 7.13539e+07 0.00261689 1.40542e+07 8.78352e+06 1.41764e+07 152 1.41941e+07 1.33964e+07 0.00231088 1.40946e+07 49.8242 0.00219661 0.99564 0 50.2164 GTEX-1NV8Z-3026-SM-DTX8Z 1 B1 4 pieces, no abnormalities 7.3 Brain Brain - Cerebellum 0002037 1350 1116 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.98942 1.94561e+06 0.947048 0.991542 0.736414 24348 1 76 0.00212749 272 0 9.79822e+07 0.0525639 1.14304e+06 9.8818e+07 4.48672e+06 24383 4.86431e+07 0 0.210634 0.991542 0.730185 9.79822e+07 0.0024813 2.12885e+07 1.90833e+07 2.11456e+07 264 2.16905e+07 1.34195e+07 0.00230401 2.09288e+07 49.1064 0.0115671 0.993663 0 49.8315 GTEX-1NV8Z-3126-SM-E76R3 1 B1 4 pieces, no abnormalities 6.8 Brain Brain - Cortex 0001870 1351 1115 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993464 511649 0.963695 0.994908 0.827603 24143 1 76 0.00176132 269 0 8.68128e+07 0.0359535 2.97651e+06 8.72572e+07 5.28641e+06 24166 4.32409e+07 0 0.136092 0.994908 0.823388 8.68128e+07 0.00243808 1.90198e+07 1.19929e+07 1.9194e+07 312 1.92406e+07 1.05694e+07 0.00209921 1.90761e+07 49.7853 0.0341119 0.996352 0 50.2279 GTEX-1O97I-0004-SM-DE1KT B1 Blood Whole Blood 0013756 1136 BP-65677 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1O97I-0004-SM-DJWYL B1 Blood Whole Blood 0013756 1136 BP-65677 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1O97I-0005-SM-DKPPY B1 7.5 Blood Whole Blood 0013756 1136 BP-65678 RNA isolation_PAXgene Blood RNA (Manual) 07/27/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.977719 427180 0.983076 0.979783 0.804764 19871 1 76 0.00273316 199 0 1.19503e+08 0.016131 421922 1.21969e+08 1.21625e+07 19884 5.94608e+07 0 0.178312 0.979783 0.788494 1.19503e+08 0.00333718 2.79207e+07 1.5327e+08 2.81443e+07 243 2.82533e+07 3.13291e+07 0.00303453 2.80603e+07 49.8287 0.00345926 0.981847 0 50.1995 GTEX-1O97I-0326-SM-EYYX7 1 C1 6 pieces; half well trimed; other 3 have up to 20% dermal fat 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1164 1305 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984725 116358 0.973303 0.9887 0.810481 22304 1 76 0.00203903 138 0 5.62598e+07 0.0264989 281910 5.69027e+07 1.97445e+06 22325 2.79606e+07 0 0.162821 0.9887 0.801323 5.62598e+07 0.00355293 1.22299e+07 5.16612e+06 1.23016e+07 131 1.23577e+07 1.02658e+07 0.00279294 1.23834e+07 50.0521 0.00495424 0.992675 0 50.1462 GTEX-1O97I-0826-SM-E8VNE 1 C1 2 pieces; mild increase in interstitial fibrous tissue 6.2 Heart Heart - Left Ventricle 0006566 1184 1285 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986115 136592 0.990355 0.987899 0.869176 18122 1 76 0.00188347 364 0 7.77418e+07 0.00960983 5.5345e+06 7.8694e+07 3.97216e+06 18126 3.87201e+07 0 0.121179 0.987899 0.858658 7.77418e+07 0.0026244 1.71212e+07 2.813e+07 1.75577e+07 370 1.73361e+07 2.84356e+06 0.00225326 1.74392e+07 50.1482 0.0703293 0.989683 0 50.6294 GTEX-1O97I-1026-SM-E76PI 1 C1 2 pieces; blood vessels at 1 pole 6.4 Thyroid Thyroid 0002046 1186 1283 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991875 378790 0.968204 0.993324 0.734068 24424 1 76 0.00204313 139 0 7.05426e+07 0.0314695 256031 7.10167e+07 4.74032e+06 24456 3.51179e+07 0 0.234136 0.993324 0.729167 7.05426e+07 0.00290885 1.54546e+07 6.93818e+06 1.55011e+07 151 1.55691e+07 1.1251e+07 0.00247536 1.54825e+07 49.8606 0.00360522 0.994773 0 50.0751 GTEX-1O97I-1126-SM-E9U69 1 C1 6 pieces; 3 well preserved; 3 have squamous fragmentation 5.5 Esophagus Esophagus - Mucosa 0006920 1187 1282 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 EXCLUDE 0.980269 135803 0.978814 0.981184 0.868947 18250 1 76 0.00186488 261 0 7.42558e+07 0.0210039 2.53602e+06 7.56798e+07 3.45756e+06 18256 3.70133e+07 0 0.109868 0.981184 0.852597 7.42558e+07 0.00289971 1.67323e+07 7.3568e+06 1.69089e+07 261 1.67985e+07 8.8255e+06 0.00238181 1.69059e+07 50.1593 0.0335099 0.982099 0 50.2625 GTEX-1O97I-1726-SM-EXOIP 2 C1 2 pieces; 50% internal fat; partially fibrotic islets 5.5 Pancreas Pancreas 0001150 1199 1270 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.965385 275888 0.972185 0.967298 0.848984 21884 1 76 0.00239144 265 0 9.74233e+07 0.0275182 2.65238e+06 1.00717e+08 5.7813e+06 21904 4.8483e+07 0 0.123201 0.967298 0.821221 9.74233e+07 0.00376646 2.19746e+07 2.4258e+07 2.24561e+07 306 2.23626e+07 1.70998e+07 0.00307759 2.22506e+07 49.8744 0.026335 0.969211 0 50.5419 GTEX-1O97I-1826-SM-EXUS9 1 C1 6 pieces; up to 10% fibrous content 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 1209 1260 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.978122 303142 0.971745 0.980017 0.830613 22029 1 76 0.00241961 192 0 7.26475e+07 0.0280758 2.83603e+06 7.41288e+07 2.88436e+06 22046 3.61314e+07 0 0.141133 0.980017 0.814015 7.26475e+07 0.0030297 1.59411e+07 7.19706e+06 1.62352e+07 221 1.61856e+07 7.77918e+06 0.00272407 1.61175e+07 49.8947 0.0382581 0.981912 0 50.457 GTEX-1O97I-2426-SM-DPRZ2 2 C1 2 pieces; spermatogenesis; focus of hyalinized tubules comprises 20% of 1 piece [outlined] 6.1 Testis Testis 0000473 1228 1241 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.991887 361014 0.921597 0.992742 0.715091 32473 1 76 0.00204676 152 0 6.9795e+07 0.0781066 795550 7.03053e+07 3.82964e+06 32527 3.47806e+07 0 0.206506 0.992742 0.709901 6.9795e+07 0.00253372 1.43756e+07 1.01393e+07 1.44834e+07 146 1.44978e+07 1.02395e+07 0.00229003 1.44108e+07 49.8495 0.0113156 0.993598 0 50.1867 GTEX-1O9I2-0004-SM-DE1IA B1 Blood Whole Blood 0013756 1154 BP-65852 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/31/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1O9I2-0004-SM-DJWWK B1 Blood Whole Blood 0013756 1154 BP-65852 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/31/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1O9I2-0005-SM-DKPQ1 B1 7.3 Blood Whole Blood 0013756 1154 BP-65860 RNA isolation_PAXgene Blood RNA (Manual) 07/31/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.972867 560913 0.982388 0.974804 0.821503 18795 1 76 0.00226093 272 0 1.35169e+08 0.0170449 247847 1.38662e+08 1.36373e+07 18809 6.72792e+07 0 0.160886 0.974804 0.800804 1.35169e+08 0.00269137 3.17383e+07 1.87729e+08 3.19313e+07 293 3.20604e+07 3.71385e+07 0.00247572 3.18814e+07 49.86 0.00178741 0.97674 0 50.1515 GTEX-1O9I2-0226-SM-EYYXD 0 C1 6 pieces, no dermal fat; squamous epithelium is ~30 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1248 1274 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984833 123912 0.974011 0.987115 0.74984 23676 1 76 0.00231946 148 0 7.19033e+07 0.0257933 513005 7.28419e+07 2.80078e+06 23711 3.57764e+07 0 0.22417 0.987115 0.740178 7.19033e+07 0.00321043 1.58858e+07 6.90299e+06 1.60372e+07 161 1.60185e+07 1.09642e+07 0.00276391 1.60615e+07 50.0672 0.00704272 0.989397 0 50.237 GTEX-1O9I2-0426-SM-E76PY 0 C1 2 pieces, prominent Monkeberg medial sclerosis, rep delineated; non adherent fat or significant atherosis 7.1 Blood Vessel Artery - Tibial 0007610 1259 1263 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992121 514311 0.976216 0.993685 0.827856 21749 1 76 0.00183807 279 0 1.03385e+08 0.023412 374122 1.04042e+08 6.46505e+06 21780 5.14772e+07 0 0.14836 0.993685 0.822628 1.03385e+08 0.00293786 2.2161e+07 8.08696e+06 2.23287e+07 311 2.23933e+07 2.04392e+07 0.0023871 2.2247e+07 49.8361 0.00359589 0.995249 0 50.1886 GTEX-1O9I2-0526-SM-EYYXI 0 C1 2 pieces, ~10% interstial fat, rep delineated 7.2 Muscle Muscle - Skeletal 0011907 1272 1250 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.990382 135156 0.9811 0.99223 0.857725 19963 1 76 0.00185338 206 0 7.78938e+07 0.0186938 730029 7.85038e+07 2.35436e+06 19971 3.88107e+07 0 0.123376 0.99223 0.85106 7.78938e+07 0.00281281 1.71546e+07 6.24528e+06 1.72973e+07 224 1.73064e+07 1.60498e+07 0.0023322 1.72746e+07 49.954 0.00929928 0.994078 0 50.2071 GTEX-1O9I2-1126-SM-DTXEA 1 C1 2 pieces, mild interstitial fibrosis/chronic ischemic change 5.6 Heart Heart - Left Ventricle 0006566 1297 1225 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994717 549206 0.983216 0.995287 0.884663 21323 1 76 0.00197093 373 0 1.12421e+08 0.0165761 3.13364e+06 1.12954e+08 6.23042e+06 21336 5.60212e+07 0 0.0985528 0.995287 0.880494 1.12421e+08 0.00231821 2.52103e+07 1.0499e+07 2.54278e+07 357 2.55653e+07 2.15129e+07 0.00214447 2.51298e+07 49.5705 0.0277427 0.995857 0 50.2148 GTEX-1O9I2-1226-SM-E6CQC 1 C1 2 pieces, regressive changes; adherent nubbins of fat up to ~1.5mm, rep delineated 5.5 Thyroid Thyroid 0002046 1306 1216 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514,LCSET-10947 05/01/2017 TruSeq.v1 RNASEQ 0.990049 526818 0.970566 0.992118 0.766364 24705 1 76 0.00207434 377 0 1.17714e+08 0.0291645 333388 1.1865e+08 1.18556e+07 24749 5.85499e+07 0 0.204202 0.992118 0.760323 1.17714e+08 0.00349349 2.58878e+07 1.5654e+07 2.60143e+07 352 2.60267e+07 1.90025e+07 0.00278243 2.61083e+07 50.0783 0.00280985 0.994187 0 50.1219 GTEX-1O9I2-1326-SM-E6CQD 1 C1 2 pieces, ~10-15% fascia/vascular elements 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1318 1204 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992374 352071 0.979475 0.993983 0.820767 22678 1 76 0.00227103 164 0 7.70457e+07 0.0202574 240101 7.75121e+07 1.268e+07 22695 3.8356e+07 0 0.158708 0.993983 0.815828 7.70457e+07 0.00313729 1.71461e+07 8.00259e+06 1.6966e+07 176 1.69775e+07 1.49937e+07 0.00270346 1.72536e+07 50.4033 0.00309759 0.995594 0 49.736 GTEX-1O9I2-2926-SM-DPRYD 1 C1 1 piece, all adenohypophysis 6.8 Pituitary Pituitary 0000007 1421 1101 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994597 429743 0.94997 0.995421 0.755187 23936 1 76 0.00187761 121 0 5.95034e+07 0.0497768 176911 5.97771e+07 3.29165e+06 23965 2.96521e+07 0 0.194784 0.995421 0.751729 5.95034e+07 0.00259289 1.22483e+07 1.61277e+07 1.24743e+07 134 1.24642e+07 9.8598e+06 0.00223495 1.23115e+07 49.6919 0.00295951 0.996246 0 50.4571 GTEX-1O9I2-3026-SM-E76PX 1 C1 4 pieces, no abnormalities 5.9 Brain Brain - Cortex 0001870 1428 1094 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992979 823826 0.955694 0.994374 0.8047 25389 1 76 0.00194136 380 0 1.05006e+08 0.0439448 3.18800e+06 1.056e+08 6.42932e+06 25418 5.22883e+07 0 0.150994 0.994374 0.800173 1.05006e+08 0.0026146 2.28229e+07 2.32918e+07 2.31712e+07 336 2.32223e+07 1.43344e+07 0.00227751 2.29011e+07 49.6519 0.0301894 0.995769 0 50.3786 GTEX-1OFPY-0004-SM-DE1JV C1 Blood Whole Blood 0013756 -103 BP-65924 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1OFPY-0004-SM-DJWX5 C1 Blood Whole Blood 0013756 -103 BP-65924 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2015 LCSET-10394,LCSET-10559 02/03/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1OFPY-0005-SM-DKPPZ C1 8.2 Blood Whole Blood 0013756 -103 BP-65929 RNA isolation_PAXgene Blood RNA (Manual) 08/04/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.984932 544688 0.977221 0.986873 0.841145 17593 1 76 0.00288898 198 0 1.12891e+08 0.022039 494283 1.14393e+08 1.07667e+07 17599 5.61801e+07 0 0.136076 0.986873 0.830103 1.12891e+08 0.00329108 2.60753e+07 1.0625e+08 2.62794e+07 250 2.63477e+07 2.86622e+07 0.00308963 2.62292e+07 49.8873 0.00432093 0.988813 0 50.1949 GTEX-1OFPY-0126-SM-EXOJ3 1 C1 2 pieces; slight congestion 7.6 Spleen Spleen 0002106 117 680 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.964841 241562 0.957067 0.966858 0.798129 23839 1 76 0.00277806 157 0 7.63613e+07 0.041831 296579 7.89789e+07 5.13198e+06 23859 3.79191e+07 0 0.158939 0.966858 0.771677 7.63613e+07 0.0042214 1.66515e+07 1.09245e+07 1.68373e+07 181 1.67516e+07 1.22581e+07 0.00349823 1.68848e+07 50.1979 0.00375517 0.968875 0 50.2774 GTEX-1OFPY-0326-SM-E76OI 1 C1 2 pieces; total sclerosis of tubules (no spermatogenesis) with Leydig cell hyperplasia. Changes consistent with Klinefelter syndrome. 7 Testis Testis 0000473 128 669 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 EXCLUDE 0.993244 546142 0.973363 0.994627 0.769767 24138 1 76 0.00186962 274 0 9.57565e+07 0.0263894 475922 9.62738e+07 6.02506e+06 24185 4.76864e+07 0 0.203595 0.994627 0.765632 9.57565e+07 0.0026636 2.11766e+07 8.20066e+06 2.12439e+07 261 2.1375e+07 1.55527e+07 0.00226606 2.11652e+07 49.7534 0.00494342 0.99601 0 50.0794 GTEX-1OFPY-0626-SM-EXOJ4 1 C1 2 pieces; 10% & 30% internal fat; several partially sclerosed islets [arrowed] 7.4 Pancreas Pancreas 0001150 141 656 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989894 340601 0.978807 0.991744 0.859735 22401 1 76 0.0021607 156 0 1.08133e+08 0.0209643 260257 1.09033e+08 6.17427e+06 22417 5.38451e+07 0 0.119072 0.991744 0.852637 1.08133e+08 0.00336658 2.4794e+07 2.46037e+07 2.50141e+07 192 2.49504e+07 3.27508e+07 0.00276252 2.50508e+07 50.1004 0.00238695 0.993594 0 50.221 GTEX-1OFPY-0826-SM-DTX8P 0 C1 2 pieces; 5% fibrous content 8.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 151 646 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991909 907054 0.981946 0.994076 0.872939 22366 1 76 0.00174018 214 0 8.87655e+07 0.017718 474758 8.92944e+07 3.76559e+06 22379 4.41481e+07 0 0.109007 0.994076 0.867768 8.87655e+07 0.00218418 1.96364e+07 7.36729e+06 1.96585e+07 239 1.98791e+07 1.82014e+07 0.00196169 1.95961e+07 49.6415 0.00531677 0.996244 0 50.0281 GTEX-1OFPY-0926-SM-DTX8Q 0 C1 2 pieces; 1 piece surrounded by up to 1.4mm fibrous subpericardial layer; other has 60% fibrofatty content 8.2 Heart Heart - Atrial Appendage 0006631 159 638 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990862 834141 0.98497 0.993376 0.853514 21037 1 76 0.00165793 370 0 1.05892e+08 0.0148162 2.35221e+06 1.06598e+08 4.75138e+06 21049 5.26432e+07 0 0.131455 0.993376 0.847861 1.05892e+08 0.00200052 2.24443e+07 2.43453e+07 2.26889e+07 369 2.27446e+07 1.57291e+07 0.00182879 2.26049e+07 49.846 0.0220661 0.995891 0 50.2709 GTEX-1OFPY-1026-SM-EXUSO 0 C1 2 pieces; minimal fibrous & fatty content 8 Heart Heart - Left Ventricle 0006566 158 639 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992924 433857 0.983662 0.993809 0.861815 20322 1 76 0.00147733 266 0 8.3621e+07 0.0160815 1.46962e+06 8.4142e+07 1.87035e+06 20337 4.16773e+07 0 0.121847 0.993809 0.85648 8.3621e+07 0.00203261 1.83518e+07 1.06622e+07 1.86555e+07 292 1.85181e+07 1.34611e+07 0.00175472 1.85405e+07 50.0303 0.0174659 0.994693 0 50.4102 GTEX-1OFPY-1126-SM-E8VNV 0 C1 2 pieces; atheromatous plaques of mild and moderate degree; perivascular fat eccentrically 7.3 Blood Vessel Artery - Coronary 0001621 158 639 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98221 630703 0.96537 0.983397 0.840512 22412 1 76 0.00181203 208 0 8.86862e+07 0.0340013 365446 9.01835e+07 4.9612e+06 22427 4.41518e+07 0 0.124858 0.983397 0.826557 8.86862e+07 0.00248266 1.88576e+07 1.67958e+07 1.9095e+07 232 1.89719e+07 1.66405e+07 0.00214694 1.91033e+07 50.1726 0.00405225 0.984583 0 50.3128 GTEX-1OFPY-1226-SM-E76OM 0 C1 6 pieces; well dissected muscularis propria with up to 10% submucosal stroma 8 Colon Colon - Sigmoid 0001159 163 634 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993471 580965 0.976196 0.994851 0.841196 22490 1 76 0.0016598 381 0 1.0401e+08 0.0235443 666932 1.04548e+08 6.29531e+06 22509 5.18118e+07 0 0.135 0.994851 0.836864 1.0401e+08 0.00255512 2.24932e+07 1.04206e+07 2.26754e+07 336 2.27438e+07 1.962e+07 0.00210684 2.2557e+07 49.7938 0.00637918 0.99623 0 50.2017 GTEX-1OFPY-1326-SM-E76ON 1 C1 6 pieces; well dissected 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 162 635 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993427 687589 0.977226 0.994826 0.828023 23003 1 76 0.00173369 277 0 9.83714e+07 0.022519 744930 9.88831e+07 6.2759e+06 23032 4.89854e+07 0 0.149202 0.994826 0.823739 9.83714e+07 0.0025034 2.14705e+07 9.40209e+06 2.16101e+07 321 2.17464e+07 1.72197e+07 0.00211801 2.14588e+07 49.6671 0.00753344 0.996224 0 50.162 GTEX-1OFPY-1426-SM-DTXEI 1 C1 6 pieces; 5-20% stromal content 9 Esophagus Esophagus - Muscularis 0004648 164 633 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99525 518214 0.981724 0.996054 0.895799 20573 1 76 0.00168498 214 0 8.19994e+07 0.017906 532378 8.23243e+07 3.90884e+06 20578 4.08598e+07 0 0.0859253 0.996054 0.892264 8.19994e+07 0.00233634 1.77026e+07 6.10326e+06 1.78072e+07 213 1.78317e+07 1.82391e+07 0.00201039 1.77443e+07 49.8771 0.00646684 0.996858 0 50.1474 GTEX-1OFPY-1526-SM-DTX8R 1 C1 2 pieces; well preserved; no lesions 7.1 Thyroid Thyroid 0002046 166 631 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990889 832571 0.972134 0.992992 0.800525 22795 1 76 0.0018129 171 0 7.99011e+07 0.0275754 283170 8.0465e+07 3.67383e+06 22823 3.97249e+07 0 0.171609 0.992992 0.794915 7.99011e+07 0.00234413 1.76479e+07 7.57157e+06 1.75912e+07 191 1.78233e+07 1.40529e+07 0.00207795 1.75686e+07 49.6402 0.00351917 0.995095 0 49.9196 GTEX-1OFPY-2126-SM-EXUSP 1 C1 2 pieces; well trimmed vessels 1 with eccentric fibrous plaque 1mm thick 5.7 Blood Vessel Artery - Tibial 0007610 385 412 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.980849 107039 0.971812 0.981279 0.824719 20406 1 76 0.00170244 115 0 5.7642e+07 0.0277921 227218 5.87417e+07 1.64563e+06 20419 2.87297e+07 0 0.147093 0.981279 0.809279 5.7642e+07 0.00216159 1.23745e+07 3.99042e+06 1.24813e+07 138 1.24383e+07 1.08435e+07 0.00193191 1.24407e+07 50.0049 0.00386809 0.981709 0 50.215 GTEX-1OFPY-2226-SM-E76OO 1 C1 2 pieces; prominent 40% internal fat content 7 Nerve Nerve - Tibial 0001323 383 414 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992156 619996 0.967215 0.993545 0.723985 25273 1 76 0.00196646 289 0 1.13081e+08 0.0325233 386782 1.13816e+08 6.81379e+06 25336 5.63072e+07 0 0.24323 0.993545 0.719311 1.13081e+08 0.00277811 2.48931e+07 9.95658e+06 2.49839e+07 323 2.51124e+07 1.68254e+07 0.00237172 2.49096e+07 49.7973 0.0033983 0.994933 0 50.091 GTEX-1OFPY-2326-SM-E8VNU 1 C1 2 pieces; 10% fibrous content 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 368 429 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986202 704271 0.974577 0.98755 0.827651 22579 1 76 0.00166467 212 0 9.33375e+07 0.025132 373571 9.45142e+07 4.61401e+06 22605 4.64709e+07 0 0.146926 0.98755 0.817347 9.33375e+07 0.00234888 2.04036e+07 1.12635e+07 2.06103e+07 253 2.05376e+07 1.66974e+07 0.00200631 2.06053e+07 50.0823 0.00395254 0.988898 0 50.252 GTEX-1OFPY-2426-SM-DTXEJ 1 C1 6 pieces; well trimmed; minimal dermal fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 374 423 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993801 516166 0.974522 0.994674 0.826965 22710 1 76 0.00198684 227 0 8.01024e+07 0.0252148 455199 8.05313e+07 4.48493e+06 22733 3.99022e+07 0 0.147557 0.994674 0.82256 8.01024e+07 0.00235366 1.75177e+07 8.07196e+06 1.76204e+07 207 1.76785e+07 1.45546e+07 0.00217009 1.75286e+07 49.7871 0.00565245 0.995548 0 50.1462 GTEX-1OFPY-2526-SM-DTXEK 1 C1 2 pieces; 5% fat content 8.1 Muscle Muscle - Skeletal 0011907 375 422 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.9948 349679 0.982632 0.995733 0.875811 19405 1 76 0.00169643 155 0 6.54808e+07 0.0171601 916803 6.57614e+07 3.2487e+06 19418 3.26436e+07 0 0.10682 0.995733 0.872074 6.54808e+07 0.00208954 1.43699e+07 6.3253e+06 1.45195e+07 165 1.4524e+07 1.32133e+07 0.0018928 1.4416e+07 49.8135 0.0139413 0.996666 0 50.259 GTEX-1OJC3-0003-SM-DE1JY C1 Blood Whole Blood 0013756 -126 BP-66074 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/07/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1OJC3-0003-SM-DJWXZ C1 Blood Whole Blood 0013756 -126 BP-66074 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/07/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1OJC3-0006-SM-DKPP1 C1 9.6 Blood Whole Blood 0013756 -126 BP-66075 RNA isolation_PAXgene Blood RNA (Manual) 08/07/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991692 1.59112e+06 0.949065 0.993574 0.797473 20844 1 76 0.00317612 276 0 1.21981e+08 0.0503893 460689 1.2277e+08 1.27467e+07 20863 6.07333e+07 0 0.151593 0.993574 0.792348 1.21981e+08 0.00329986 2.62791e+07 5.2759e+07 2.64813e+07 302 2.65814e+07 2.49342e+07 0.00323787 2.64177e+07 49.8455 0.00375247 0.995456 0 50.1916 GTEX-1OJC3-0126-SM-E76QX 1 C1 6 pieces; ; epidermis ~41 microns thick; 5% to 20% of periadnexal (internal) fat; a few hair follicles 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 172 664 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992605 435104 0.975228 0.994282 0.84482 22382 1 76 0.00185542 253 0 8.82332e+07 0.0245286 709118 8.87406e+07 5.4701e+06 22408 4.39394e+07 0 0.130408 0.994282 0.83999 8.82332e+07 0.0028954 1.92787e+07 9.10174e+06 1.93713e+07 236 1.94152e+07 1.67167e+07 0.00237453 1.93765e+07 49.9502 0.0079909 0.995958 0 50.1198 GTEX-1OJC3-0526-SM-E8VMF 1 C1 2 pieces; ~0.25mm rim of adventitia 8.7 Blood Vessel Artery - Tibial 0007610 178 658 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988977 471336 0.978644 0.990165 0.874096 20508 1 76 0.0015408 217 0 8.84151e+07 0.0208509 422373 8.92934e+07 4.16672e+06 20524 4.40448e+07 0 0.104548 0.990165 0.865499 8.84151e+07 0.00216895 1.88861e+07 5.81979e+06 1.90979e+07 222 1.90305e+07 1.9745e+07 0.0018545 1.90549e+07 50.0321 0.00473017 0.991352 0 50.2788 GTEX-1OJC3-0626-SM-E8VMO 1 C1 2 pieces; mild to moderate autolysis; interstitial fibrosis with lobulation 7.8 Thyroid Thyroid 0002046 192 644 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98878 481345 0.972147 0.989967 0.812484 23499 1 76 0.00168412 171 0 7.74252e+07 0.0275205 342991 7.82098e+07 3.99868e+06 23529 3.85632e+07 0 0.159663 0.989967 0.804333 7.74252e+07 0.00231266 1.68845e+07 6.68310e+06 1.70068e+07 190 1.69622e+07 1.39032e+07 0.00199802 1.70172e+07 50.0809 0.00438553 0.991155 0 50.1805 GTEX-1OJC3-0726-SM-DTX92 1 C1 2 pieces; mild to focally moderate autolysis; bronchioles and alveoli filled with hemosiderinophages (rep arrowed); collapsed alveolar spaces (atelectasis) 8.5 Lung Lung 0008952 207 629 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991528 1.04281e+06 0.974799 0.993462 0.807746 24175 1 76 0.00211928 170 0 8.44967e+07 0.0248177 490777 8.50528e+07 3.56968e+06 24203 4.20201e+07 0 0.167053 0.993462 0.802464 8.44967e+07 0.00244757 1.87884e+07 6.8349e+06 1.88046e+07 200 1.90336e+07 1.59039e+07 0.00228311 1.87095e+07 49.5706 0.00577026 0.995395 0 50.0215 GTEX-1OJC3-0826-SM-DPRYU 1 C1 6 pieces; mild to focally moderate autolysis; ~0.3mm thick epithelium: numerous submucosal glands 9.9 Esophagus Esophagus - Mucosa 0006920 229 607 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.99217 431941 0.98162 0.99321 0.863935 21652 1 76 0.00194394 176 0 7.90954e+07 0.0177025 391308 7.96361e+07 4.42131e+06 21664 3.93954e+07 0 0.117685 0.99321 0.858069 7.90954e+07 0.00284412 1.79686e+07 1.07964e+07 1.80974e+07 186 1.81013e+07 1.78282e+07 0.00239355 1.80426e+07 49.9187 0.0049137 0.99425 0 50.1785 GTEX-1OJC3-0926-SM-E6CQJ 1 C1 6 piece; essentially well trimmed with a narrow rim of serosa (arrows) 9 Esophagus Esophagus - Muscularis 0004648 230 606 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991965 657106 0.977558 0.993916 0.850283 22570 1 76 0.00219966 220 0 9.05135e+07 0.0220613 612681 9.10675e+07 1.5676e+07 22589 4.50321e+07 0 0.127275 0.993916 0.84511 9.05135e+07 0.00320085 1.9784e+07 7.9763e+06 1.95339e+07 242 1.95508e+07 1.74376e+07 0.00269927 1.99247e+07 50.4736 0.00672777 0.995867 0 49.682 GTEX-1OJC3-1026-SM-E6CQK 1 C1 2 pieces; well trimmed salivary gland 8.9 Salivary Gland Minor Salivary Gland 0006330 193 643 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990245 648720 0.974074 0.992213 0.809541 24213 1 76 0.00278458 172 0 8.68916e+07 0.0245027 313219 8.75736e+07 1.56953e+07 24240 4.31707e+07 0 0.164533 0.992213 0.803237 8.68916e+07 0.00363038 1.94168e+07 1.06822e+07 1.9262e+07 201 1.93671e+07 1.60981e+07 0.00320664 1.94763e+07 50.1406 0.00357664 0.994181 0 49.7999 GTEX-1OJC3-1226-SM-DTXER 1 C1 6 pieces; hair bearing skin with trace of periadnexal fat 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 211 625 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993842 665242 0.977932 0.994678 0.867915 21825 1 76 0.00201793 392 0 9.9218e+07 0.021813 813860 9.97488e+07 5.52492e+06 21843 4.94294e+07 0 0.110018 0.994678 0.863296 9.9218e+07 0.00248151 2.18617e+07 1.32557e+07 2.20324e+07 340 2.2068e+07 1.90039e+07 0.00224952 2.19111e+07 49.8217 0.00815909 0.995515 0 50.1945 GTEX-1OJC3-1326-SM-E9J3D 1 C1 2 pieces; lobulated adipose tissue; congestion 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 215 621 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.991037 529992 0.977008 0.99203 0.833521 23288 1 76 0.00181454 375 0 1.06087e+08 0.0227027 880915 1.06939e+08 5.15509e+06 23325 5.28764e+07 0 0.143487 0.99203 0.826877 1.06087e+08 0.00250505 2.32828e+07 9.12305e+06 2.35757e+07 343 2.35126e+07 1.79374e+07 0.00215945 2.34475e+07 49.9307 0.00823753 0.993022 0 50.3126 GTEX-1OJC3-1626-SM-E9U65 1 C1 6 pieces; target abundant mucosal lymphoid tissue; non-target muscularis present 8.6 Small Intestine Small Intestine - Terminal Ileum 0001211 241 595 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990288 247001 0.962596 0.991151 0.768215 25772 1 76 0.00243773 277 0 9.6322e+07 0.0359832 344057 9.7182e+07 3.43804e+06 25813 4.79631e+07 0 0.194381 0.991151 0.761418 9.6322e+07 0.00333199 2.11686e+07 1.28806e+07 2.13011e+07 257 2.12991e+07 1.68194e+07 0.00288447 2.12493e+07 49.9416 0.00354034 0.992015 0 50.1559 GTEX-1OJC3-1826-SM-DTX93 1 C1 6 pieces; target muscularis with ~1mm attached serosa 8.1 Colon Colon - Sigmoid 0001159 258 578 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989514 901532 0.972892 0.991891 0.803516 24313 1 76 0.00225964 215 0 8.66247e+07 0.0260148 916328 8.73329e+07 3.84235e+06 24342 4.30211e+07 0 0.169376 0.991891 0.797 8.66247e+07 0.00277674 1.92493e+07 1.07085e+07 1.92184e+07 220 1.94735e+07 1.41626e+07 0.00251757 1.91737e+07 49.6121 0.0104924 0.994267 0 49.9599 GTEX-1OJC3-1926-SM-DPRYV 1 C1 2 pieces; fibromuscular stroma and glandular hyperplasia with amylaceous bodies 8.2 Prostate Prostate 0002367 278 558 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993403 485985 0.968739 0.994347 0.788744 25017 1 76 0.00205159 167 0 7.73973e+07 0.0308976 375420 7.78373e+07 4.52963e+06 25051 3.85487e+07 0 0.179995 0.994347 0.784286 7.73973e+07 0.00264379 1.70225e+07 7.62926e+06 1.71878e+07 188 1.71915e+07 1.27016e+07 0.00234741 1.70864e+07 49.8466 0.00482314 0.995291 0 50.2415 GTEX-1OJC4-0001-SM-DE1IE B1 Blood Whole Blood 0013756 1227 BP-66074 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/07/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1OJC4-0001-SM-DJWWU B1 Blood Whole Blood 0013756 1227 BP-66074 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/07/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1OJC4-0005-SM-DKPQ4 B1 7.8 Blood Whole Blood 0013756 1227 BP-66075 RNA isolation_PAXgene Blood RNA (Manual) 08/07/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.983669 701739 0.97557 0.986019 0.791472 20562 1 76 0.00258899 262 0 1.25379e+08 0.0235615 607780 1.27157e+08 1.28412e+07 20574 6.23501e+07 0 0.184098 0.986019 0.780407 1.25379e+08 0.00334829 2.914e+07 1.444e+08 2.93662e+07 260 2.94574e+07 3.07995e+07 0.00296773 2.93551e+07 49.9131 0.00477976 0.98837 0 50.1933 GTEX-1OJC4-0011-R6a-SM-EXOIM B1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1219 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.990035 415041 0.96574 0.99204 0.854897 24150 1 76 0.00184105 372 0 9.82712e+07 0.0338497 4.65871e+06 9.90598e+07 5.47185e+06 24172 4.8908e+07 0 0.110843 0.99204 0.848092 9.82712e+07 0.00311934 2.15271e+07 1.05911e+07 2.17926e+07 331 2.17938e+07 1.28543e+07 0.0024789 2.17021e+07 49.8946 0.0470293 0.994044 0 50.3065 GTEX-1OJC4-0011-R7a-SM-EYYX4 B1, A1 5.8 Brain Brain - Putamen (basal ganglia) 0001874 1219 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.983997 224071 0.963495 0.98827 0.854868 22089 1 76 0.00204524 198 0 6.31962e+07 0.0360753 5.24318e+06 6.39463e+07 2.62216e+06 22104 3.13819e+07 0 0.108627 0.98827 0.84484 6.31962e+07 0.00368048 1.37848e+07 1.07549e+07 1.4081e+07 216 1.40188e+07 5.8942e+06 0.00285932 1.40684e+07 50.0883 0.0819935 0.992543 0 50.5314 GTEX-1OJC4-0011-R9a-SM-EZ6N1 B1, A1 6.3 Brain Brain - Spinal cord (cervical c-1) 0006469 1219 BP-80523 RNA isolation_PAXgene Tissue miRNA 11/14/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988882 204301 0.96655 0.99016 0.854635 22107 1 76 0.00212847 290 0 9.59047e+07 0.0332821 9.17595e+06 9.68578e+07 6.3319e+06 22126 4.78196e+07 0 0.111914 0.99016 0.846225 9.59047e+07 0.00313857 2.11986e+07 1.74972e+07 2.15056e+07 314 2.1229e+07 8.39627e+06 0.00263287 2.15605e+07 50.3873 0.0947362 0.991438 0 50.3594 GTEX-1OJC4-0126-SM-E9J2E 1 B1 6 pieces; relatively well trimmed, include up to ~10% mostly internal fat, epidermis measures 44 microns 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1270 1229 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.984307 371239 0.969599 0.985209 0.758643 24150 1 76 0.00189245 186 0 8.02721e+07 0.0301895 337860 8.14772e+07 4.21651e+06 24185 3.99802e+07 0 0.210956 0.985209 0.747422 8.02721e+07 0.0026808 1.74621e+07 7.35496e+06 1.76368e+07 194 1.75476e+07 1.24628e+07 0.00228626 1.76267e+07 50.1124 0.00414668 0.986112 0 50.2489 GTEX-1OJC4-0226-SM-E9J4U 1 B1 2 pieces; essentially well trimmed, <10% attachment of fat 7 Nerve Nerve - Tibial 0001323 1272 1227 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.991786 485934 0.960683 0.992918 0.697303 23755 1 76 0.00199654 141 0 6.09933e+07 0.0391062 238591 6.14283e+07 3.18988e+06 23796 3.03567e+07 0 0.26338 0.992918 0.692365 6.09933e+07 0.0028056 1.33309e+07 5.09788e+06 1.34336e+07 150 1.33835e+07 7.71379e+06 0.00240061 1.34475e+07 50.1193 0.00388406 0.99405 0 50.1918 GTEX-1OJC4-0526-SM-E6CQV 2 B1 2 pieces; nodular goiter, Hashimoto thyroiditis, one piece includes ~50% fat/fibrovascular tissue 5.9 Thyroid Thyroid 0002046 1280 1219 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.986933 424642 0.962364 0.989023 0.752972 24957 1 76 0.00320796 144 0 7.56573e+07 0.0351726 237990 7.6497e+07 1.32795e+07 24987 3.75112e+07 0 0.209392 0.989023 0.744706 7.56573e+07 0.0044838 1.67038e+07 1.37454e+07 1.65404e+07 163 1.66137e+07 1.12863e+07 0.00384453 1.67831e+07 50.2536 0.0031111 0.991114 0 49.7542 GTEX-1OJC4-0626-SM-DTXEY 1 B1 2 pieces; include pleura (target is 1cm below pleura), numerous pigmented macrophages, some congestion, fibrosis 6.4 Lung Lung 0008952 1282 1217 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992629 338274 0.972685 0.993278 0.764655 23339 1 76 0.00213086 269 0 9.50507e+07 0.0270797 1.5956e+06 9.56939e+07 5.3811e+06 23372 4.73574e+07 0 0.20803 0.993278 0.759516 9.50507e+07 0.00237208 2.10038e+07 1.12091e+07 2.11989e+07 320 2.11809e+07 1.13904e+07 0.00225139 2.10757e+07 49.8755 0.016674 0.993927 0 50.2312 GTEX-1OJC4-1726-SM-EXUSV 0 B1 2 pieces; 20-40% fibrovascular component 9.2 Adipose Tissue Adipose - Subcutaneous 0002190 1314 1185 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.984511 259283 0.968571 0.986335 0.810517 22973 1 76 0.00203429 159 0 7.06836e+07 0.0311248 221828 7.16629e+07 3.51076e+06 22997 3.51581e+07 0 0.158054 0.986335 0.799441 7.06836e+07 0.00268965 1.5374e+07 5.80668e+06 1.54637e+07 170 1.54749e+07 1.3247e+07 0.00236136 1.54812e+07 50.0102 0.00309544 0.988159 0 50.1454 GTEX-1OJC4-1826-SM-EXOJI 2 B1 2 pieces; congestion, one piece includes ~10% fat 9.6 Spleen Spleen 0002106 1315 1184 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 EXCLUDE 0.81034 236172 0.671081 0.816352 0.209749 24012 1 76 0.00447676 94 0 4.26184e+07 0.328126 457235 5.22059e+07 7.22002e+06 24142 2.08558e+07 0 0.461332 0.816352 0.171229 4.26184e+07 0.00695115 6.81833e+06 7.52166e+06 6.53671e+06 107 6.53644e+06 1.16902e+06 0.00570485 7.00773e+06 51.7398 0.0087583 0.822363 0 48.9456 GTEX-1OJC4-2026-SM-E6CQW 0 B1 2 pieces; corpora albicantia 6.2 Ovary Ovary 0000992 1323 1176 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990896 299932 0.966797 0.992813 0.769206 22595 1 76 0.00223971 153 0 7.08392e+07 0.0329907 305320 7.1352e+07 1.25683e+07 22621 3.52404e+07 0 0.197591 0.992813 0.763678 7.08392e+07 0.003301 1.56394e+07 9.81497e+06 1.53809e+07 158 1.53694e+07 1.28455e+07 0.00276933 1.57895e+07 50.6742 0.00427907 0.99473 0 49.5833 GTEX-1OJC4-2326-SM-DTXA5 2 B1 6 pieces; predominantly cortex, 2 are (largely) medulla, arteriosclerosis 6.7 Kidney Kidney - Cortex 0001225 1329 1170 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.99011 640572 0.966674 0.99228 0.804055 23669 1 76 0.00189268 165 0 6.9867e+07 0.0331315 3.13028e+06 7.04106e+07 3.3963e+06 23700 3.47269e+07 0 0.162619 0.99228 0.797848 6.9867e+07 0.00232074 1.53379e+07 7.27111e+06 1.54291e+07 194 1.56074e+07 9.46757e+06 0.00210624 1.53e+07 49.5026 0.0444575 0.99445 0 50.1483 GTEX-1OJC4-2726-SM-E76PJ 1 B1 6 pieces; 3 are well trimmed, 3 include ~5-10 % attached fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1337 1162 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992901 459038 0.974687 0.994301 0.758242 23496 1 76 0.00190169 215 0 8.91656e+07 0.0250829 380546 8.96767e+07 5.66709e+06 23534 4.44026e+07 0 0.216444 0.994301 0.753921 8.91656e+07 0.00273719 1.9484e+07 9.70624e+06 1.95095e+07 203 1.96366e+07 1.55e+07 0.00231885 1.94735e+07 49.7916 0.00424353 0.995701 0 50.0327 GTEX-1OJC4-2826-SM-E6CQX 1 B1 4 pieces (fragmented); some meninges present, includes significant white matter 6.6 Brain Brain - Cortex 0001870 1370 1129 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991091 699304 0.957416 0.99342 0.823827 24031 1 76 0.00212463 267 0 8.86618e+07 0.0422194 3.80287e+06 8.9249e+07 1.51912e+07 24050 4.41015e+07 0 0.133588 0.99342 0.818407 8.86618e+07 0.00333881 1.91969e+07 2.46869e+07 1.95909e+07 324 1.95981e+07 1.04755e+07 0.00273029 1.93542e+07 49.6869 0.0426096 0.99575 0 50.5079 GTEX-1OJC4-3026-SM-EXOJJ 1 B1 1 piece; adenohypophysis 7.4 Pituitary Pituitary 0000007 1372 1127 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.977067 134280 0.95139 0.978758 0.753461 23404 1 76 0.00204984 104 0 4.86179e+07 0.0484068 438981 4.96731e+07 2.92962e+06 23429 2.41773e+07 0 0.197929 0.978758 0.737455 4.86179e+07 0.00325323 1.02e+07 4.99824e+06 1.02944e+07 113 1.02404e+07 6.94645e+06 0.0026505 1.03243e+07 50.2041 0.00883741 0.980449 0 50.2304 GTEX-1OJC4-3126-SM-EXOJK 1 B1 2 pieces; 20 and 60% salivary gland elements, rest is mostly fat/nerve 5.5 Salivary Gland Minor Salivary Gland 0006330 1375 1124 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984025 351251 0.969268 0.986276 0.788332 24419 1 76 0.00246173 183 0 7.86497e+07 0.0289046 270642 7.97441e+07 4.74688e+06 24445 3.90432e+07 0 0.180936 0.986276 0.777513 7.86497e+07 0.0040936 1.76307e+07 1.26708e+07 1.77619e+07 182 1.77631e+07 1.35738e+07 0.0032758 1.7792e+07 50.0406 0.00339388 0.988528 0 50.1853 GTEX-1OKEX-0003-SM-DE1IK C1 Blood Whole Blood 0013756 -230 BP-66264 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/14/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1OKEX-0003-SM-DJWXH C1 Blood Whole Blood 0013756 -230 BP-66264 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/14/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1OKEX-0006-SM-DKPQ2 C1 8.4 Blood Whole Blood 0013756 -230 BP-66268 RNA isolation_PAXgene Blood RNA (Manual) 08/14/2015 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.986062 849758 0.969092 0.988604 0.824387 18851 1 76 0.00267158 271 0 1.28197e+08 0.0303364 510134 1.29674e+08 1.35833e+07 18862 6.37805e+07 0 0.144705 0.988604 0.814992 1.28197e+08 0.00365257 2.85258e+07 1.10673e+08 2.88685e+07 314 2.89652e+07 2.94024e+07 0.00316082 2.87446e+07 49.8089 0.00393396 0.991145 0 50.2985 GTEX-1OKEX-0626-SM-E76PZ 1 C1 2 pieces, one section with ~70% occlusive atherosis, delineated, other cut en-face, ~50% myometrium/fat, ensquared--sample with care 7.6 Blood Vessel Artery - Coronary 0001621 260 891 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993588 535997 0.978263 0.994918 0.863137 21949 1 76 0.00168748 216 0 9.56216e+07 0.0212298 368938 9.611e+07 5.66714e+06 21965 4.76244e+07 0 0.115126 0.994918 0.85875 9.56216e+07 0.00258262 2.06457e+07 6.65328e+06 2.07618e+07 254 2.07854e+07 2.0409e+07 0.00213445 2.07417e+07 49.9474 0.0038387 0.996248 0 50.1401 GTEX-1OKEX-0726-SM-DPRYE 1 C1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 7.9 Heart Heart - Left Ventricle 0006566 263 888 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.995165 274031 0.984176 0.996118 0.874831 19748 1 76 0.00157542 195 0 7.20217e+07 0.0156258 1.41718e+06 7.23024e+07 4.1941e+06 19759 3.59076e+07 0 0.109345 0.996118 0.871435 7.20217e+07 0.00213059 1.58849e+07 9.27055e+06 1.61265e+07 236 1.60301e+07 1.20214e+07 0.00185274 1.60249e+07 49.992 0.0196007 0.99707 0 50.3775 GTEX-1OKEX-0826-SM-E9J2B 1 C1 2 pieces, fibroadipose elements only 5.9 Breast Breast - Mammary Tissue 0008367 266 885 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.979756 243482 0.974254 0.980428 0.84247 22132 1 76 0.00161775 277 0 8.45544e+07 0.0254601 836388 8.62423e+07 4.39340e+06 22148 4.21453e+07 0 0.131784 0.980428 0.825981 8.45544e+07 0.00224337 1.85318e+07 9.69234e+06 1.88035e+07 265 1.8676e+07 1.43058e+07 0.00193035 1.87183e+07 50.0566 0.00969811 0.981101 0 50.3639 GTEX-1OKEX-0926-SM-E8VNJ 1 C1 2 pieces, ~5% vascular/fascia elements, rep delineated 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 270 881 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.989554 747135 0.978812 0.991068 0.832329 22934 1 76 0.00152191 275 0 9.54947e+07 0.0209316 705568 9.63554e+07 5.06276e+06 22958 4.75575e+07 0 0.146483 0.991068 0.824895 9.54947e+07 0.00221223 2.10655e+07 8.12717e+06 2.12894e+07 271 2.12684e+07 1.70962e+07 0.00186654 2.12219e+07 49.9453 0.00732256 0.992583 0 50.2644 GTEX-1OKEX-1126-SM-DTXEB 1 C1 6 pieces, ~20% target lymphoid aggregates 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 288 863 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994787 661635 0.978501 0.995677 0.851284 23078 1 76 0.00176683 381 0 9.81861e+07 0.0212051 854678 9.86125e+07 5.1519e+06 23098 4.89284e+07 0 0.127218 0.995677 0.847603 9.81861e+07 0.00215908 2.14784e+07 8.64979e+06 2.16316e+07 333 2.16745e+07 1.78586e+07 0.00196278 2.15148e+07 49.8151 0.00866704 0.996567 0 50.1777 GTEX-1OKEX-1226-SM-DTXEC 1 C1 6 piec, target mucosa partially sloughed but well-fixed, up to ~0.4mm 8.5 Colon Colon - Transverse 0001157 289 862 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995079 646744 0.979282 0.995861 0.861885 22275 1 76 0.00172077 207 0 8.31446e+07 0.0204159 433674 8.34902e+07 4.11312e+06 22291 4.14298e+07 0 0.117397 0.995861 0.858317 8.31446e+07 0.00214266 1.82888e+07 7.05103e+06 1.83818e+07 211 1.8447e+07 1.74625e+07 0.00193155 1.82874e+07 49.7828 0.00519431 0.996642 0 50.1268 GTEX-1OKEX-1326-SM-E9J2U 1 C1 6 piece, squamous mucosa up to ~0.3mm, ~25% thicknesss 8.8 Esophagus Esophagus - Mucosa 0006920 292 859 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987791 526161 0.97735 0.988746 0.849126 21602 1 76 0.00178462 177 0 7.82479e+07 0.0223847 392140 7.91385e+07 3.50823e+06 21620 3.89783e+07 0 0.128223 0.988746 0.839571 7.82479e+07 0.00261932 1.76187e+07 1.01327e+07 1.77771e+07 188 1.77168e+07 1.61637e+07 0.00220156 1.77598e+07 50.0606 0.00495511 0.989702 0 50.2238 GTEX-1OKEX-1426-SM-E6CP3 1 C1 6 pieces, confirmed target muscularis 7.8 Esophagus Esophagus - Muscularis 0004648 294 857 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991236 460927 0.978671 0.993278 0.853274 21936 1 76 0.00200871 210 0 8.17055e+07 0.0210633 771760 8.22585e+07 1.36013e+07 21953 4.06586e+07 0 0.125397 0.993278 0.847538 8.17055e+07 0.00315523 1.79084e+07 7.98898e+06 1.78589e+07 215 1.78555e+07 1.48647e+07 0.00258079 1.80623e+07 50.2879 0.00938214 0.99532 0 49.9308 GTEX-1OKEX-1726-SM-E9U4F 1 C1 2 pieces, ~20% fat, delineated, only rare Islets, well-preserved, rep encircled 5.9 Pancreas Pancreas 0001150 303 848 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.984004 468303 0.968945 0.985062 0.83251 21543 1 76 0.0018939 120 0 7.86979e+07 0.0308295 475737 7.98914e+07 2.69413e+06 21560 3.92216e+07 0 0.136435 0.985062 0.820074 7.86979e+07 0.002849 1.78571e+07 2.33335e+07 1.80455e+07 140 1.79928e+07 2.07171e+07 0.00237094 1.79978e+07 50.0069 0.0059548 0.98612 0 50.2624 GTEX-1OKEX-1826-SM-DTX8J 1 C1 2 pieces, glandular hyperplasia, focal acute prostatitis, delineated 7.1 Prostate Prostate 0002367 307 844 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990264 1.07116e+06 0.966996 0.99225 0.777574 25356 1 76 0.00190959 207 0 9.00046e+07 0.0327095 345110 9.07076e+07 4.10937e+06 25390 4.47289e+07 0 0.189422 0.99225 0.771547 9.00046e+07 0.00246497 1.97348e+07 9.32637e+06 1.96682e+07 224 1.99753e+07 1.44564e+07 0.00218672 1.96006e+07 49.5266 0.00380464 0.994235 0 49.9156 GTEX-1OKEX-1926-SM-E6CP7 1 C1 2 pieces, spermatogenesis is present 6.1 Testis Testis 0000473 309 842 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990006 875339 0.91671 0.991958 0.71392 34434 1 76 0.00220236 291 0 1.07288e+08 0.0829906 1.66928e+06 1.08158e+08 1.79649e+07 34513 5.33858e+07 0 0.20279 0.991958 0.708179 1.07288e+08 0.00321267 2.20643e+07 2.59501e+07 2.19546e+07 276 2.20479e+07 1.59915e+07 0.00270652 2.21504e+07 50.116 0.0154338 0.993911 0 49.8753 GTEX-1OKEX-2026-SM-E8VNL 0 C1 6 pieces, squamous epithelium up to ~50 microns; trace dermal fat, rep delineated 5.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 317 834 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 EXCLUDE 0.987082 312711 0.973596 0.988247 0.808607 23040 1 76 0.00157044 145 0 6.6069e+07 0.0261632 428578 6.68547e+07 3.33701e+06 23061 3.29217e+07 0 0.164989 0.988247 0.799104 6.6069e+07 0.0021921 1.46322e+07 6.51571e+06 1.47199e+07 164 1.46765e+07 1.13446e+07 0.0018809 1.47489e+07 50.123 0.00641059 0.989413 0 50.1493 GTEX-1OZHM-0003-SM-DCXSA B1 Blood Whole Blood 0013756 996 BP-66452 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1OZHM-0003-SM-DJWYU B1 Blood Whole Blood 0013756 996 BP-66452 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/21/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1P4AB-0001-SM-DE1JX B1 Blood Whole Blood 0013756 548 BP-66473 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/24/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1P4AB-0001-SM-DJWXJ B1 Blood Whole Blood 0013756 548 BP-66473 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/24/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1P4AB-0005-SM-CY8GM B1 6.7 Blood Whole Blood 0013756 548 BP-66475 RNA isolation_PAXgene Blood RNA (Manual) 08/24/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.955393 344727 0.986374 0.957099 0.814733 16480 1 76 0.00464296 100 0 1.0329e+08 0.0123305 332670 1.07919e+08 1.13057e+07 16483 5.1321e+07 0 0.171641 0.957099 0.77978 1.0329e+08 0.00755358 2.44672e+07 1.81536e+08 2.4721e+07 142 2.4633e+07 2.88461e+07 0.00609568 2.47599e+07 50.1285 0.00308258 0.958805 0 50.258 GTEX-1P4AB-0326-SM-EXUT3 1 B1 2 pieces; 5% internal fat content 6.9 Muscle Muscle - Skeletal 0011907 698 762 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.993462 319232 0.976235 0.993904 0.848155 20765 1 76 0.00160462 200 0 7.94283e+07 0.0235219 885831 7.99154e+07 2.39111e+06 20776 3.9609e+07 0 0.12808 0.993904 0.842984 7.94283e+07 0.00208946 1.71251e+07 7.4987e+06 1.74766e+07 209 1.74286e+07 1.47046e+07 0.00184693 1.72046e+07 49.6765 0.0110846 0.994346 0 50.5079 GTEX-1P4AB-0926-SM-E76PV 1 B1 2 pieces; no excess fat or fibrous stroma 7.3 Heart Heart - Atrial Appendage 0006631 784 676 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993558 449864 0.98072 0.994966 0.84139 22219 1 76 0.00206859 270 0 9.92726e+07 0.0189877 2.03306e+06 9.97749e+07 6.40173e+06 22241 4.94452e+07 0 0.13933 0.994966 0.837154 9.92726e+07 0.00280106 2.1708e+07 1.3493e+07 2.19414e+07 322 2.21012e+07 1.59095e+07 0.00243431 2.16729e+07 49.5108 0.0203764 0.996373 0 50.2673 GTEX-1P4AB-1026-SM-DTXES 1 B1 2 pieces; patchy emphysema; moderate number of alveolar macrophages 6.5 Lung Lung 0008952 788 672 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992641 555764 0.971939 0.993429 0.780827 24306 1 76 0.00226008 200 0 9.08722e+07 0.0277233 448322 9.14733e+07 5.0838e+06 24340 4.52432e+07 0 0.191111 0.993429 0.775697 9.08722e+07 0.00261142 1.99316e+07 9.53771e+06 2.00636e+07 216 2.01114e+07 1.56279e+07 0.00243561 1.99586e+07 49.8094 0.00490112 0.994217 0 50.165 GTEX-1P4AB-1126-SM-DTX94 2 B1 2 pieces; well trimmed 6.7 Thyroid Thyroid 0002046 793 667 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990077 1.00253e+06 0.968391 0.99199 0.791714 24099 1 76 0.00197888 175 0 8.33933e+07 0.0312544 180747 8.40667e+07 3.76157e+06 24129 4.14417e+07 0 0.176677 0.99199 0.785372 8.33933e+07 0.00242578 1.83201e+07 7.53713e+06 1.82464e+07 187 1.85363e+07 1.55008e+07 0.0022019 1.81805e+07 49.5156 0.00215004 0.993902 0 49.8993 GTEX-1P4AB-1226-SM-DTXET 1 B1 2 pieces; minimal fibrous content; central defect, possible fracture 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 799 661 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992669 655810 0.974129 0.993789 0.818202 23843 1 76 0.0020328 215 0 9.51482e+07 0.0255471 472923 9.57429e+07 5.09472e+06 23875 4.73684e+07 0 0.155927 0.993789 0.81312 9.51482e+07 0.00269541 2.08298e+07 1.01928e+07 2.09282e+07 237 2.10168e+07 1.83407e+07 0.00236373 2.08497e+07 49.8005 0.00493951 0.994908 0 50.1179 GTEX-1P4AB-1826-SM-E76PU 1 B1 2 pieces; fibroadipose tissue with mammary ducts 6.8 Breast Breast - Mammary Tissue 0008367 854 606 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.983006 375048 0.970276 0.984297 0.740707 24025 1 76 0.0020851 147 0 7.3773e+07 0.0293115 283567 7.49499e+07 4.52594e+06 24073 3.67204e+07 0 0.229569 0.984297 0.729076 7.3773e+07 0.00285487 1.63012e+07 7.98264e+06 1.63237e+07 161 1.641e+07 1.18525e+07 0.00246948 1.63084e+07 49.8447 0.00378342 0.985587 0 50.0345 GTEX-1P4AB-1926-SM-E6CQL 2 B1 2 pieces; 1 largely fibromuscular stroma; other with autolyzed glands & muscular stroma 5.5 Prostate Prostate 0002367 855 605 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.987504 234143 0.965852 0.989455 0.788551 24742 1 76 0.00266496 208 0 8.52985e+07 0.0339401 1.75357e+06 8.62076e+07 1.51292e+07 24780 4.24171e+07 0 0.177301 0.989455 0.780236 8.52985e+07 0.00394011 1.87239e+07 1.04431e+07 1.90355e+07 226 1.8997e+07 1.06135e+07 0.00330128 1.89187e+07 49.8967 0.0203412 0.991407 0 50.4126 GTEX-1P4AB-2626-SM-DTXEU 1 B1 6 pieces; thin remnants of mucosa on all; questionable value 6.1 Colon Colon - Sigmoid 0001159 893 567 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992202 473223 0.969663 0.992945 0.812502 23855 1 76 0.00222872 275 0 9.77752e+07 0.0300758 1.24096e+06 9.84698e+07 5.65332e+06 23891 4.86905e+07 0 0.157161 0.992945 0.806769 9.77752e+07 0.00259251 2.12366e+07 9.47308e+06 2.15116e+07 321 2.15419e+07 1.49044e+07 0.00241048 2.12784e+07 49.6923 0.0126025 0.993688 0 50.3216 GTEX-1P4AB-2926-SM-EXOJR 1 B1 2 pieces; larger is a well dissected gland; smaller contains gland with 50% skin [labeled] and stroma 7.1 Salivary Gland Minor Salivary Gland 0006330 949 511 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.986862 349759 0.965034 0.988958 0.743398 25207 1 76 0.00251507 212 0 9.28176e+07 0.033584 221794 9.38539e+07 5.71337e+06 25253 4.61167e+07 0 0.221636 0.988958 0.735189 9.28176e+07 0.00383359 2.04818e+07 9.77798e+06 2.06728e+07 220 2.06793e+07 1.4079e+07 0.00317293 2.06567e+07 49.9728 0.00236318 0.991055 0 50.2321 GTEX-1P4AB-3026-SM-EXOJS 2 B1 4 fragmented pieces 7.4 Brain Brain - Cerebellum 0002037 999 461 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989183 321532 0.948689 0.990983 0.726323 24281 1 76 0.0023337 269 0 1.04155e+08 0.0508737 1.30263e+06 1.05103e+08 6.06913e+06 24324 5.18174e+07 0 0.222366 0.990983 0.719774 1.04155e+08 0.00342004 2.25549e+07 9.45834e+06 2.27218e+07 294 2.27386e+07 1.31801e+07 0.00287588 2.27015e+07 49.9592 0.0123939 0.992784 0 50.1843 GTEX-1PAR6-0008-SM-DMZ2D B1 Skin Cells - Cultured fibroblasts EFO_0002009 160 BP-75713 RNA isolation_Trizol Manual (Cell Pellet) 06/15/2016 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1PBJI-0003-SM-DE1IF C1 Blood Whole Blood 0013756 961 BP-67461 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/25/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PBJI-0003-SM-DJWWV C1 Blood Whole Blood 0013756 961 BP-67461 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/25/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PBJI-0005-SM-CJI1Y C1 7.7 Blood Whole Blood 0013756 961 BP-67471 RNA isolation_PAXgene Blood RNA (Manual) 09/25/2015 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.991452 783437 0.971585 0.992754 0.793953 21986 1 76 0.00212537 168 0 9.20914e+07 0.0279231 397655 9.27635e+07 5.17172e+06 22018 4.58212e+07 0 0.177632 0.992754 0.7882 9.20914e+07 0.00312012 2.06919e+07 4.23613e+07 2.08686e+07 179 2.09234e+07 2.01344e+07 0.00262209 2.07726e+07 49.8191 0.00428676 0.994056 0 50.2126 GTEX-1PBJI-0426-SM-E8VNM 0 C1 2 pieces, ~10% fascia/vascular elements, rep delineated 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1258 1342 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.983539 636035 0.977704 0.984961 0.791866 23077 1 76 0.00197233 193 0 8.45996e+07 0.0219819 564309 8.58913e+07 4.72907e+06 23107 4.20975e+07 0 0.185838 0.984961 0.779957 8.45996e+07 0.00268484 1.86704e+07 6.94953e+06 1.88589e+07 214 1.88211e+07 1.35335e+07 0.00232807 1.88237e+07 50.0035 0.00657003 0.986383 0 50.2511 GTEX-1PBJI-0526-SM-E8VNK 0 C1 6 pieces, no significant dermal fat; squamous epithelium up to ~50 microns 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1259 1341 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.982726 505909 0.972103 0.984012 0.748399 25278 1 76 0.00200004 212 0 9.23996e+07 0.0276554 702477 9.39009e+07 5.12964e+06 25325 4.59967e+07 0 0.223704 0.984012 0.736434 9.23996e+07 0.002669 2.03564e+07 8.19617e+06 2.05353e+07 224 2.04697e+07 1.35704e+07 0.00233408 2.0538e+07 50.0834 0.00748104 0.985297 0 50.2188 GTEX-1PBJI-0726-SM-EXUSQ 1 C1 2 pieces, no abnormalities 9.6 Thyroid Thyroid 0002046 1262 1338 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.957003 139764 0.961469 0.957791 0.737749 23513 1 76 0.00206998 131 0 6.74622e+07 0.0382073 528822 7.04352e+07 2.44544e+06 23549 3.36084e+07 0 0.22372 0.957791 0.706609 6.74622e+07 0.00255679 1.47337e+07 7.88096e+06 1.48759e+07 157 1.48429e+07 9.03962e+06 0.00231319 1.48121e+07 49.9481 0.00750793 0.958579 0 50.2402 GTEX-1PBJI-1326-SM-E9J2V 0 C1 2 pieces, trace fascia/mesothelial hyperplasia 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1276 1324 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.979875 568334 0.973804 0.980978 0.762228 23970 1 76 0.00215793 376 0 1.19256e+08 0.0258919 704787 1.21568e+08 6.54081e+06 24017 5.93518e+07 0 0.211576 0.980978 0.747729 1.19256e+08 0.00306171 2.62088e+07 1.47194e+07 2.66301e+07 383 2.64657e+07 1.63927e+07 0.00260931 2.65138e+07 50.0454 0.00579745 0.982082 0 50.3987 GTEX-1PBJI-1426-SM-EYYXG 0 C1 6 pieces, no significant dermal fat; squamous epithelium is ~40 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1278 1322 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.97604 376800 0.946064 0.980217 0.710688 23305 1 76 0.0025049 117 0 5.36072e+07 0.0536409 334718 5.46891e+07 2.58632e+06 23331 2.65871e+07 0 0.235376 0.980217 0.696628 5.36072e+07 0.00416777 1.14572e+07 1.27845e+07 1.16036e+07 117 1.16251e+07 7.73846e+06 0.00333279 1.163e+07 50.0105 0.00612038 0.984394 0 50.3175 GTEX-1PBJI-2026-SM-DPRYF 1 C1 2 pieces, inactive stroma for reported age 6.1 Ovary Ovary 0000992 1289 1311 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994439 187945 0.97224 0.995093 0.747539 21214 1 76 0.00199745 120 0 4.97389e+07 0.027547 103306 4.99842e+07 2.89381e+06 21238 2.47809e+07 0 0.224701 0.995093 0.743871 4.97389e+07 0.00260881 1.09209e+07 4.6733e+06 1.10182e+07 122 1.09771e+07 8.12427e+06 0.00230293 1.09989e+07 50.0495 0.00206677 0.995746 0 50.2219 GTEX-1PBJI-2126-SM-DPRYG 2 C1 2 pieces, moderate-focally advanced saponification; rare degenerating Islets still visible, rep delineated 6 Pancreas Pancreas 0001150 1291 1309 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994076 184791 0.988729 0.994921 0.886503 17601 1 76 0.00213698 99 0 5.26768e+07 0.0110833 320065 5.29457e+07 3.07467e+06 17610 2.62375e+07 0 0.102226 0.994921 0.882 5.26768e+07 0.00296833 1.22455e+07 1.63388e+07 1.25413e+07 115 1.24051e+07 1.7955e+07 0.0025523 1.24245e+07 50.0391 0.00604515 0.995766 0 50.5967 GTEX-1PBJI-2326-SM-E6CP6 1 C1 2 pieces, myometrium only 7.5 Uterus Uterus 0000995 1294 1306 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991787 295480 0.968662 0.993406 0.780085 23118 1 76 0.00242761 139 0 6.91914e+07 0.031119 388256 6.96507e+07 1.22128e+07 23147 3.44264e+07 0 0.188577 0.993406 0.774941 6.91914e+07 0.0033974 1.5175e+07 6.72e+06 1.51462e+07 164 1.50989e+07 1.0186e+07 0.00291171 1.53348e+07 50.3877 0.00557433 0.995025 0 49.9524 GTEX-1PBJI-2526-SM-E6CP4 1 C1 6 pieces, confirmed target muscularis 7.3 Colon Colon - Sigmoid 0001159 1306 1294 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.98987 339461 0.972028 0.991691 0.769704 22729 1 76 0.00256502 130 0 6.48742e+07 0.0277358 881619 6.54178e+07 1.18936e+07 22761 3.22554e+07 0 0.202324 0.991691 0.763308 6.48742e+07 0.00355528 1.41465e+07 5.59411e+06 1.41197e+07 148 1.41082e+07 9.38408e+06 0.00305924 1.42709e+07 50.2867 0.0134767 0.993511 0 49.9525 GTEX-1PBJI-2726-SM-E6CP5 2 C1 1 piece, adenohypophysis only 7.3 Pituitary Pituitary 0000007 1337 1263 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991327 374419 0.967073 0.993176 0.754598 25110 1 76 0.00251701 148 0 7.20357e+07 0.0327039 1.17262e+06 7.25306e+07 1.24847e+07 25151 3.58336e+07 0 0.212476 0.993176 0.749448 7.20357e+07 0.00364577 1.58075e+07 8.37948e+06 1.59e+07 171 1.58863e+07 9.02349e+06 0.00308034 1.59435e+07 50.0899 0.0161672 0.995024 0 50.1459 GTEX-1PBJJ-0004-SM-DE1II C1 Blood Whole Blood 0013756 386 BP-67461 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/25/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PBJJ-0004-SM-DJWWY C1 Blood Whole Blood 0013756 386 BP-67461 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/25/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PBJJ-0005-SM-CKZND C1 8.9 Blood Whole Blood 0013756 386 BP-67471 RNA isolation_PAXgene Blood RNA (Manual) 09/25/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.978119 521386 0.98196 0.980413 0.800147 18709 1 76 0.00235093 145 0 1.01326e+08 0.0169852 362284 1.0335e+08 1.04679e+07 18722 5.03633e+07 0 0.181813 0.980413 0.784475 1.01326e+08 0.00395342 2.32544e+07 1.10134e+08 2.34941e+07 174 2.35739e+07 2.41585e+07 0.0031503 2.34063e+07 49.8217 0.00350541 0.982707 0 50.2564 GTEX-1PBJJ-0326-SM-E8VNT 1 C1 2 pieces; 10% and negligible internal fat 8.1 Muscle Muscle - Skeletal 0011907 677 1071 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.990026 533235 0.984324 0.991458 0.875117 19847 1 76 0.00156145 272 0 9.10016e+07 0.0154644 859790 9.17856e+07 4.36852e+06 19856 4.53465e+07 0 0.109206 0.991458 0.867642 9.10016e+07 0.00224707 1.97558e+07 9.27781e+06 2.00796e+07 282 2.0016e+07 1.77569e+07 0.00190377 1.99289e+07 49.891 0.00936737 0.99289 0 50.4064 GTEX-1PBJJ-0426-SM-E8VNP 1 C1 2 piece; ~15% internal fat 6.5 Nerve Nerve - Tibial 0001323 678 1070 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98556 600298 0.963273 0.98678 0.772262 23457 1 76 0.00184901 171 0 7.4953e+07 0.03641 314595 7.59572e+07 4.0061e+06 23482 3.73158e+07 0 0.191011 0.98678 0.762053 7.4953e+07 0.00247025 1.63343e+07 1.27771e+07 1.64968e+07 178 1.64391e+07 1.22487e+07 0.00215925 1.64889e+07 50.0756 0.00414174 0.988 0 50.2474 GTEX-1PBJJ-0626-SM-DPRYO 1 C1 2 pieces; congestion 6.1 Liver Liver 0001114 680 1068 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.992764 267276 0.97406 0.994142 0.846082 21394 1 76 0.00280645 197 0 7.38097e+07 0.0257502 1.72496e+06 7.42446e+07 3.82782e+06 21408 3.67532e+07 0 0.127978 0.994142 0.841126 7.38097e+07 0.00312676 1.61607e+07 1.07462e+07 1.64436e+07 218 1.63799e+07 9.18682e+06 0.00296638 1.63163e+07 49.9027 0.0232334 0.99552 0 50.4338 GTEX-1PBJJ-1026-SM-E76OS 1 C1 6 pieces; hair bearing skin with small amounts of mostly periadnexal fat 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 683 1065 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993943 289368 0.979765 0.995218 0.811103 22604 1 76 0.00193934 228 0 8.53142e+07 0.0199633 352818 8.57241e+07 5.31891e+06 22631 4.25179e+07 0 0.168662 0.995218 0.807224 8.53142e+07 0.0027121 1.86992e+07 9.66386e+06 1.87768e+07 236 1.87986e+07 1.56178e+07 0.00232522 1.87759e+07 49.9698 0.00411574 0.996492 0 50.1035 GTEX-1PBJJ-1926-SM-DTX8T 1 C1 2 pieces 6.6 Thyroid Thyroid 0002046 703 1045 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989786 863747 0.967767 0.991641 0.756761 25281 1 76 0.00210063 212 0 9.90331e+07 0.0318969 268547 9.9868e+07 5.18215e+06 25325 4.92309e+07 0 0.211007 0.991641 0.750435 9.90331e+07 0.00250471 2.16725e+07 9.18067e+06 2.1649e+07 233 2.19415e+07 1.63809e+07 0.00230229 2.15499e+07 49.5498 0.00268902 0.993495 0 49.9729 GTEX-1PBJJ-2026-SM-DTX8U 1 C1 6 pieces; target muscularis 6.7 Colon Colon - Sigmoid 0001159 704 1044 BP-78433 RNA Extraction from Paxgene-derived Lysate Plate Based 09/13/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990631 975656 0.973977 0.992888 0.857974 21301 1 76 0.00182795 161 0 7.67687e+07 0.0257889 418232 7.73186e+07 3.76108e+06 21314 3.81574e+07 0 0.116003 0.992888 0.851872 7.67687e+07 0.00247745 1.64592e+07 6.73032e+06 1.64957e+07 184 1.66617e+07 1.50504e+07 0.00215196 1.64577e+07 49.6921 0.0054092 0.995144 0 50.0554 GTEX-1PDJ9-0003-SM-DE1IC B1 Blood Whole Blood 0013756 -238 BP-67719 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PDJ9-0003-SM-DJWWM B1 Blood Whole Blood 0013756 -238 BP-67719 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PDJ9-0006-SM-CY8GN B1 8.5 Blood Whole Blood 0013756 -238 BP-67737 RNA isolation_PAXgene Blood RNA (Manual) 10/02/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.98736 947148 0.955584 0.989693 0.807633 18587 1 76 0.00493252 124 0 7.96014e+07 0.0439675 533850 8.04304e+07 9.48248e+06 18597 3.95804e+07 0 0.147951 0.989693 0.799309 7.96014e+07 0.0078567 1.73042e+07 3.80969e+07 1.74635e+07 147 1.75361e+07 1.58571e+07 0.00639116 1.74208e+07 49.835 0.00663742 0.992027 0 50.229 GTEX-1PDJ9-0226-SM-DPRYX 1 B1 2 pieces; slight congestion 7.4 Spleen Spleen 0002106 317 1155 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500,LCSET-10684 03/22/2017 TruSeq.v1 RNASEQ 0.992802 575745 0.964879 0.99437 0.804957 26233 1 76 0.00278421 382 0 1.62352e+08 0.0341846 1.06759e+06 1.63271e+08 6.28206e+06 26282 8.08129e+07 0 0.159923 0.99437 0.800425 1.62352e+08 0.00299294 3.56147e+07 2.19608e+07 3.59107e+07 360 3.58678e+07 2.7029e+07 0.00288841 3.58948e+07 50.0188 0.00653876 0.995939 0 50.2069 GTEX-1PDJ9-0326-SM-DTX95 1 B1 6 pieces; thick subcutaneous fat up to 1.6mm in 3 pieces; dermal fat 10% 8.9 Skin Skin - Sun Exposed (Lower leg) 0004264 835 637 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990399 1.05392e+06 0.978547 0.992573 0.814653 22572 1 76 0.0020219 187 0 7.66929e+07 0.0211596 762456 7.72667e+07 3.4554e+06 22592 3.81135e+07 0 0.163894 0.992573 0.808603 7.66929e+07 0.00244689 1.6907e+07 8.03281e+06 1.68442e+07 176 1.71199e+07 1.50135e+07 0.00223393 1.67912e+07 49.5153 0.00986784 0.994747 0 49.9069 GTEX-1PDJ9-0426-SM-E9J3E 1 B1 2 pieces; 5 & 20% fibrous content 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 847 625 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985917 511659 0.978065 0.987015 0.802017 22710 1 76 0.00211814 194 0 8.33923e+07 0.0216333 800976 8.44894e+07 3.90474e+06 22735 4.15314e+07 0 0.176048 0.987015 0.791603 8.33923e+07 0.00295406 1.84251e+07 8.34596e+06 1.86221e+07 209 1.8576e+07 1.39035e+07 0.00253564 1.85675e+07 49.9886 0.00948019 0.988112 0 50.266 GTEX-1PDJ9-0526-SM-DTXDL 1 B1 2 pieces; <5% fat content 6.5 Muscle Muscle - Skeletal 0011907 880 592 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994983 805991 0.984374 0.995729 0.883536 20169 1 76 0.00196833 279 0 1.114e+08 0.0153638 2.22559e+06 1.11878e+08 5.53267e+06 20181 5.5522e+07 0 0.100838 0.995729 0.879763 1.114e+08 0.00222808 2.47867e+07 1.26256e+07 2.51403e+07 321 2.53541e+07 2.32776e+07 0.00209811 2.46538e+07 49.2998 0.0198931 0.996476 0 50.354 GTEX-1PDJ9-0726-SM-E8VMH 1 B1 2 pieces; 20% internal & external fat content 7.1 Nerve Nerve - Tibial 0001323 889 583 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98397 540342 0.966697 0.985138 0.711411 24544 1 76 0.00192245 206 0 9.28142e+07 0.0330316 268164 9.42145e+07 4.52283e+06 24596 4.62101e+07 0 0.255286 0.985138 0.700838 9.28142e+07 0.00253634 2.03629e+07 8.95746e+06 2.05012e+07 211 2.04326e+07 1.36563e+07 0.00222903 2.05381e+07 50.1287 0.00284631 0.986305 0 50.1692 GTEX-1PDJ9-0826-SM-E76PS 1 B1 2 pieces; 5% stromal content 7.5 Thyroid Thyroid 0002046 947 525 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992466 596670 0.969324 0.993951 0.770946 24500 1 76 0.00203015 210 0 9.47071e+07 0.0303253 201172 9.52836e+07 6.22147e+06 24547 4.71535e+07 0 0.198378 0.993951 0.766282 9.47071e+07 0.00294282 2.07913e+07 8.68559e+06 2.08508e+07 217 2.09771e+07 1.66816e+07 0.0024858 2.07985e+07 49.7862 0.0021113 0.995435 0 50.0715 GTEX-1PDJ9-0926-SM-E8VOS 0 B1 6 pieces; no plaques; fibrous adventitia up to 1mm thick 7.5 Blood Vessel Artery - Aorta 0001496 950 522 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988614 370396 0.978308 0.989634 0.851801 22864 1 76 0.00166068 378 0 1.08848e+08 0.0212634 237449 1.09988e+08 5.92208e+06 22889 5.42324e+07 0 0.126507 0.989634 0.842972 1.08848e+08 0.00230833 2.35952e+07 8.38348e+06 2.37012e+07 344 2.3647e+07 2.34206e+07 0.00198417 2.37596e+07 50.1187 0.00215886 0.990654 0 50.112 GTEX-1PDJ9-1126-SM-EXUSW 1 B1 2 pieces; fibrofatty tissue with prominent slightly hyperplastic mammary ducts: gynecomastoid change 7.5 Breast Breast - Mammary Tissue 0008367 962 510 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.987033 204108 0.968181 0.987783 0.795156 22448 1 76 0.00188414 122 0 5.11271e+07 0.0315873 257088 5.17595e+07 2.24166e+06 22470 2.54616e+07 0 0.173025 0.987783 0.785442 5.11271e+07 0.00253987 1.12129e+07 4.33002e+06 1.13112e+07 127 1.12974e+07 8.80604e+06 0.00221176 1.12618e+07 49.9211 0.00496698 0.988532 0 50.2182 GTEX-1PDJ9-1226-SM-EXUSX 0 B1 6 pieces; up to 8 hair follicles per piece; subcutaneous fat up to 1mm thick 9.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 966 506 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.978109 142085 0.965749 0.978558 0.746472 22741 1 76 0.00190904 132 0 5.87555e+07 0.0339736 367051 6.00429e+07 1.98457e+06 22767 2.92782e+07 0 0.219278 0.978558 0.730466 5.87555e+07 0.00238766 1.2867e+07 6.537e+06 1.2966e+07 131 1.29164e+07 9.43633e+06 0.00214824 1.29342e+07 50.0345 0.00611314 0.979008 0 50.1915 GTEX-1PDJ9-1426-SM-DPRYW 1 B1 2 pieces; active spermatogenesis 6.2 Testis Testis 0000473 979 493 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992516 497971 0.917934 0.993502 0.720759 32953 1 76 0.00202726 179 0 8.32671e+07 0.0817461 884389 8.38117e+07 4.64226e+06 33022 4.14889e+07 0 0.197175 0.993502 0.716075 8.32671e+07 0.0027641 1.69456e+07 1.29279e+07 1.71129e+07 175 1.71334e+07 1.30122e+07 0.00239532 1.6995e+07 49.7973 0.0105521 0.994488 0 50.2456 GTEX-1PDJ9-1526-SM-DTXEV 1 B1 6 pieces; well dissected muscle except for a 0.5mm focus of squamous epithelium [labeled] 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 990 482 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993661 936310 0.973053 0.994631 0.798007 23391 1 76 0.00208348 214 0 9.22414e+07 0.0266596 460722 9.27393e+07 4.73221e+06 23427 4.59326e+07 0 0.175045 0.994631 0.793723 9.22414e+07 0.00259382 2.00778e+07 8.22985e+06 2.01789e+07 232 2.02985e+07 1.60323e+07 0.0023384 2.0043e+07 49.6833 0.00496792 0.9956 0 50.1255 GTEX-1PDJ9-1726-SM-E8VMG 1 B1 6 pieces; well dissected muscle with slight stromal content 7.4 Esophagus Esophagus - Muscularis 0004648 1012 460 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988852 886916 0.969703 0.990467 0.805535 22401 1 76 0.00180852 173 0 7.99787e+07 0.0300535 549641 8.07485e+07 4.20944e+06 22424 3.98036e+07 0 0.164168 0.990467 0.797855 7.99787e+07 0.00238626 1.72445e+07 1.05788e+07 1.74152e+07 197 1.73682e+07 1.3347e+07 0.00209692 1.7413e+07 50.0643 0.00680683 0.992081 0 50.2462 GTEX-1PDJ9-1826-SM-E9U66 1 B1 4 pieces; 50% lymphoid content in mucosa & submucosa 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 1018 454 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990594 255880 0.959418 0.991513 0.7523 25759 1 76 0.00219578 276 0 9.53091e+07 0.0399735 376500 9.61249e+07 3.48554e+06 25811 4.74955e+07 0 0.207118 0.991513 0.745915 9.53091e+07 0.00305329 2.08334e+07 1.13187e+07 2.09357e+07 257 2.09005e+07 1.487e+07 0.00262414 2.095e+07 50.0591 0.00391678 0.992431 0 50.1224 GTEX-1PDJ9-2026-SM-E76PT 1 B1 6 pieces; muscularis propria & submucosa 6.7 Colon Colon - Sigmoid 0001159 1037 435 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993168 279884 0.970111 0.994493 0.783056 23328 1 76 0.00202375 164 0 7.35069e+07 0.0296636 464535 7.39139e+07 4.53907e+06 23360 3.66182e+07 0 0.187055 0.994493 0.778744 7.35069e+07 0.0028465 1.59834e+07 6.30972e+06 1.60818e+07 175 1.60928e+07 1.14463e+07 0.00243458 1.60625e+07 49.9529 0.00628481 0.995818 0 50.1535 GTEX-1PFEY-0003-SM-DE1IB B1 Blood Whole Blood 0013756 -116 BP-67972 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PFEY-0003-SM-DJWWL B1 Blood Whole Blood 0013756 -116 BP-67972 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PFEY-0005-SM-CY8GO B1 8.7 Blood Whole Blood 0013756 -116 BP-67977 RNA isolation_PAXgene Blood RNA (Manual) 10/13/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.982853 989648 0.961791 0.984996 0.809208 19191 1 76 0.00503801 128 0 9.66709e+07 0.0372774 303194 9.81434e+07 1.12378e+07 19200 4.80546e+07 0 0.152583 0.984996 0.797067 9.66709e+07 0.00799166 2.14952e+07 7.84739e+07 2.16493e+07 164 2.17401e+07 2.14192e+07 0.00651162 2.16189e+07 49.8603 0.0030893 0.987139 0 50.1785 GTEX-1PFEY-0226-SM-EVR3M 1 C1 2 pieces, no abnormalities 7.3 Thyroid Thyroid 0002046 488 981 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988464 310153 0.967292 0.9905 0.732785 25197 1 76 0.00225425 275 0 1.15694e+08 0.032441 414771 1.16804e+08 9.08849e+06 25257 5.75913e+07 0 0.234508 0.9905 0.725823 1.15694e+08 0.00353857 2.52859e+07 1.11623e+07 2.55282e+07 309 2.55062e+07 1.72129e+07 0.00289509 2.55201e+07 50.0137 0.003551 0.992536 0 50.2384 GTEX-1PFEY-0526-SM-E76PG 1 C1 6 pieces, trace atherosis 8.2 Blood Vessel Artery - Aorta 0001496 508 961 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994514 438013 0.979727 0.995736 0.845871 22822 1 76 0.00170599 282 0 1.25311e+08 0.0197973 288713 1.25848e+08 7.89466e+06 22848 6.24504e+07 0 0.133856 0.995736 0.842264 1.25311e+08 0.00230958 2.70337e+07 8.97746e+06 2.72111e+07 322 2.72632e+07 2.69177e+07 0.00200742 2.71237e+07 49.8717 0.00229415 0.996959 0 50.1636 GTEX-1PFEY-0626-SM-E76PH 1 C1 2 pieces, no abnormalities. ~1mm focus seminal vesicle, encircled 6.5 Prostate Prostate 0002367 516 953 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993689 315672 0.974761 0.994976 0.789588 24054 1 76 0.00188089 206 0 8.41274e+07 0.0249414 308487 8.45522e+07 5.30587e+06 24085 4.19102e+07 0 0.185173 0.994976 0.785622 8.41274e+07 0.00265461 1.83384e+07 7.34658e+06 1.84427e+07 211 1.84543e+07 1.47149e+07 0.00226725 1.84302e+07 49.9674 0.00364848 0.996264 0 50.1417 GTEX-1PFEY-0726-SM-E76PO 1 C1 2 pieces, <5% vascular/mesothelial elements 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 521 948 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992792 699467 0.980284 0.994399 0.834994 23014 1 76 0.00173746 375 0 1.20425e+08 0.0194688 848917 1.21104e+08 7.98832e+06 23043 5.99781e+07 0 0.14529 0.994399 0.830317 1.20425e+08 0.00256255 2.67152e+07 1.48414e+07 2.68381e+07 360 2.70127e+07 1.99334e+07 0.00214934 2.67186e+07 49.7263 0.00700984 0.996006 0 50.1147 GTEX-1PFEY-0826-SM-E9U6A 1 C1 6 pieces, squamous mucosa up to ~0.2mm, ~20% thickness 8 Esophagus Esophagus - Mucosa 0006920 529 940 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992836 196524 0.973809 0.993611 0.815591 23160 1 76 0.00188163 159 0 7.42373e+07 0.0257098 316751 7.47147e+07 2.88797e+06 23185 3.7009e+07 0 0.158218 0.993611 0.81038 7.42373e+07 0.0027753 1.66282e+07 7.71597e+06 1.66946e+07 172 1.66722e+07 1.44655e+07 0.00232812 1.67071e+07 50.0523 0.00423948 0.994387 0 50.0996 GTEX-1PFEY-1026-SM-DTXEZ 1 C1 6 pieces, confirmed target muscularis; trace mucosa/gland, delineated 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 536 933 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994475 598210 0.976855 0.995403 0.838924 22241 1 76 0.00186244 170 0 7.61658e+07 0.0228553 508861 7.65175e+07 3.73812e+06 22258 3.79448e+07 0 0.137931 0.995403 0.835068 7.61658e+07 0.00230924 1.65766e+07 6.37541e+06 1.66435e+07 188 1.66937e+07 1.45927e+07 0.00208563 1.65964e+07 49.8539 0.00665025 0.996332 0 50.1008 GTEX-1PFEY-1126-SM-DPRZ3 1 C1 2 pieces. Islets relatively well preserved, low-moderate numbers, rep encircled 7.8 Pancreas Pancreas 0001150 538 931 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993978 280228 0.979026 0.995016 0.85767 20449 1 76 0.00205988 108 0 7.15139e+07 0.0208138 137621 7.18721e+07 3.81932e+06 20461 3.56401e+07 0 0.121356 0.995016 0.853396 7.15139e+07 0.00298255 1.65199e+07 1.57537e+07 1.66302e+07 118 1.66222e+07 2.14975e+07 0.00252073 1.66016e+07 49.9691 0.0019148 0.996055 0 50.1664 GTEX-1PFEY-1426-SM-E9U6U 1 C1 6 pieces, target muscoa unusually well-preserved, up to ~0.6mm 7.3 Colon Colon - Transverse 0001157 560 909 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989472 307196 0.970721 0.990481 0.80693 23580 1 76 0.00240986 165 0 7.78149e+07 0.0274207 755857 7.85628e+07 3.07304e+06 23608 3.87115e+07 0 0.163791 0.990481 0.799248 7.78149e+07 0.0033187 1.73163e+07 9.3989e+06 1.73931e+07 200 1.73677e+07 1.2218e+07 0.00286382 1.74115e+07 50.0629 0.00962106 0.991489 0 50.1106 GTEX-1PFEY-1526-SM-E76PP 0 C1 6 pieces, adherent dermal fat up to ~1mm, rep delineated; squamous epithelium is ~30 microns 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 557 912 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992375 404978 0.969845 0.993753 0.788784 23608 1 76 0.00189863 233 0 8.74565e+07 0.0299312 1.07189e+06 8.80063e+07 5.8385e+06 23647 4.35542e+07 0 0.181061 0.993753 0.783856 8.74565e+07 0.00275023 1.90542e+07 1.18835e+07 1.92142e+07 235 1.92303e+07 1.37115e+07 0.00232384 1.91514e+07 49.8972 0.0121797 0.995131 0 50.2091 GTEX-1PFEY-1626-SM-E9J3M 0 C1 2 pieces, fascia/vascular elements ~5-10% of tissue, rep delineated. 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 562 907 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.990017 560338 0.976802 0.990922 0.827495 23098 1 76 0.001842 276 0 1.01284e+08 0.0229044 655070 1.02212e+08 4.43241e+06 23128 5.04783e+07 0 0.149307 0.990922 0.819982 1.01284e+08 0.00267502 2.22176e+07 1.02018e+07 2.24804e+07 325 2.24216e+07 1.73703e+07 0.00225813 2.23694e+07 49.9418 0.00640892 0.991826 0 50.294 GTEX-1PFEY-1726-SM-DPRZ4 1 C1 6 pieces, confirmed target muscularis 6.9 Colon Colon - Sigmoid 0001159 567 902 BP-78473 RNA Extraction from Paxgene-derived Lysate Plate Based 09/14/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992485 403826 0.970782 0.993404 0.802518 23856 1 76 0.00218732 157 0 6.81144e+07 0.0281242 400875 6.85667e+07 3.51847e+06 23883 3.38991e+07 0 0.168263 0.993404 0.797225 6.81144e+07 0.00283552 1.49637e+07 7.2989e+06 1.5084e+07 165 1.50812e+07 1.08604e+07 0.00251112 1.50246e+07 49.906 0.0058465 0.994322 0 50.2001 GTEX-1PIEJ-0003-SM-DE1IH B1 Blood Whole Blood 0013756 -84 BP-68160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PIEJ-0003-SM-DJWWX B1 Blood Whole Blood 0013756 -84 BP-68160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PIEJ-0005-SM-DLZQL B1 7 Blood Whole Blood 0013756 -84 BP-68162 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.977299 678623 0.965752 0.986076 0.835615 18885 1 76 0.00277827 131 0 7.17099e+07 0.0336973 399130 7.27225e+07 5.74487e+06 18891 3.54409e+07 0 0.130137 0.986076 0.823979 7.17099e+07 0.0052589 1.57802e+07 3.30268e+07 1.58043e+07 142 1.61624e+07 1.60366e+07 0.00400755 1.60352e+07 49.8025 0.0054884 0.994852 0 50.0381 GTEX-1PIEJ-0326-SM-EVYB5 0 B1 2 pieces, interstitial fat/fvascular elements ~5-10% of tissue 8.1 Muscle Muscle - Skeletal 0011907 324 1346 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.994216 392511 0.984332 0.994754 0.884256 20519 1 76 0.0018277 287 0 1.07832e+08 0.0154366 1.55128e+06 1.08401e+08 4.35719e+06 20530 5.37909e+07 0 0.100076 0.994754 0.879617 1.07832e+08 0.00270735 2.40735e+07 1.10535e+07 2.44921e+07 326 2.44872e+07 2.32912e+07 0.00226729 2.41296e+07 49.6322 0.0143106 0.995292 0 50.431 GTEX-1PIEJ-0626-SM-DTX99 0 B1 2 pieces, ~95% glandular/ductal elements, delineated, good specimen 8.9 Salivary Gland Minor Salivary Gland 0006330 333 1337 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988651 802094 0.974271 0.990915 0.815958 23501 1 76 0.00258502 152 0 7.01267e+07 0.0236593 229365 7.07697e+07 3.13089e+06 23520 3.47823e+07 0 0.158313 0.990915 0.808545 7.01267e+07 0.00298445 1.56153e+07 7.29232e+06 1.5597e+07 156 1.5837e+07 1.38639e+07 0.00278428 1.5525e+07 49.5026 0.00324101 0.993179 0 49.9706 GTEX-1PIEJ-1026-SM-DTXEW 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 361 1309 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995113 441533 0.977927 0.995841 0.854549 21831 1 76 0.00198341 167 0 7.52877e+07 0.0217473 626740 7.56021e+07 3.7555e+06 21841 3.75184e+07 0 0.123378 0.995841 0.850995 7.52877e+07 0.00240808 1.63291e+07 5.96546e+06 1.64687e+07 189 1.64796e+07 1.42612e+07 0.00219559 1.63672e+07 49.829 0.00828998 0.996569 0 50.2129 GTEX-1PIEJ-1326-SM-EWRMM 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 382 1288 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989688 756997 0.977015 0.991926 0.848548 25684 1 76 0.00239775 402 0 2.28247e+08 0.0226188 1.47136e+06 2.30105e+08 1.41238e+07 25736 1.13627e+08 0 0.128467 0.991926 0.841696 2.28247e+08 0.00296962 4.89829e+07 1.8703e+07 4.97593e+07 428 4.96644e+07 4.34906e+07 0.00267635 4.9506e+07 49.9202 0.00639429 0.994163 0 50.3931 GTEX-1PIEJ-1526-SM-E6CP8 1 B1 6 pieces, ~30% target lymphoid aggregates, well preserved, excellent specimen 8.7 Small Intestine Small Intestine - Terminal Ileum 0001211 377 1293 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991335 423285 0.966016 0.993081 0.776087 24933 1 76 0.002561 174 0 8.90209e+07 0.0332936 316234 8.96411e+07 1.46767e+07 24977 4.42727e+07 0 0.189929 0.993081 0.770717 8.90209e+07 0.00371945 1.97409e+07 1.05453e+07 1.9465e+07 194 1.94985e+07 1.64836e+07 0.00313921 1.98552e+07 50.4532 0.00352778 0.994828 0 49.6482 GTEX-1PIEJ-1626-SM-E6CP9 1 B1 2 pieces, atrophic cortex for age, no abnormalities 8 Ovary Ovary 0000992 383 1287 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992167 436946 0.971431 0.993872 0.790262 23534 1 76 0.00226027 158 0 7.47335e+07 0.0283148 177208 7.51943e+07 1.27534e+07 23564 3.71827e+07 0 0.181169 0.993872 0.785419 7.47335e+07 0.00331091 1.66083e+07 8.98528e+06 1.63634e+07 165 1.63711e+07 1.39323e+07 0.00278469 1.67248e+07 50.5344 0.00235667 0.995577 0 49.6287 GTEX-1PIEJ-1726-SM-EVYB6 1 B1 2 pieces, myometrium, no abnormalities 8.2 Uterus Uterus 0000995 388 1282 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992402 149398 0.975411 0.992897 0.842742 21333 1 76 0.00187398 128 0 5.66668e+07 0.0241949 194006 5.70722e+07 2.41957e+06 21346 2.82591e+07 0 0.132669 0.992897 0.836757 5.66668e+07 0.00286951 1.22832e+07 4.17595e+06 1.24103e+07 132 1.23610e+07 1.17252e+07 0.0023715 1.23613e+07 50.0005 0.00339931 0.993393 0 50.2575 GTEX-1PIEJ-1826-SM-EWRMN 1 B1 6 pieces, confirmed target muscularis 7.4 Colon Colon - Sigmoid 0001159 396 1274 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984782 205609 0.978496 0.988302 0.869121 22547 1 76 0.00242268 174 0 7.94545e+07 0.0212182 654191 8.03949e+07 5.60238e+06 22559 3.94979e+07 0 0.109375 0.988302 0.858954 7.94545e+07 0.00341308 1.72081e+07 7.92759e+06 1.74282e+07 198 1.74245e+07 1.56923e+07 0.00290453 1.74585e+07 50.0487 0.00813722 0.991823 0 50.3177 GTEX-1PIEJ-1926-SM-EVYB7 2 B1 6 pieces, target mucosa moderately autolyzed, sloughing, up to ~25 microns residual 7.1 Vagina Vagina 0000996 393 1277 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988528 177151 0.966261 0.988927 0.750615 24443 1 76 0.00219978 153 0 7.34816e+07 0.0334363 538856 7.43044e+07 3.20787e+06 24480 3.66258e+07 0 0.215646 0.988927 0.742303 7.34816e+07 0.00311205 1.6078e+07 6.45003e+06 1.62432e+07 172 1.61481e+07 1.02336e+07 0.00265573 1.62034e+07 50.0854 0.00725201 0.989326 0 50.2555 GTEX-1PIEJ-2026-SM-E6CPA 1 B1 6 pieces, target mucosa well-preserved, up to ~0.35mm 8.7 Colon Colon - Transverse 0001157 399 1271 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.989138 536331 0.974553 0.990981 0.841466 23976 1 76 0.0030525 210 0 9.10701e+07 0.0232037 1.32219e+06 9.18989e+07 1.56006e+07 24009 4.51911e+07 0 0.133087 0.990981 0.833877 9.10701e+07 0.00403735 2.02868e+07 1.33019e+07 2.03e+07 255 2.03573e+07 1.56476e+07 0.00354401 2.03703e+07 50.016 0.0143874 0.992825 0 50.0163 GTEX-1PIGE-0001-SM-DE1IG B1 Blood Whole Blood 0013756 -120 BP-68160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PIGE-0001-SM-DJWWW B1 Blood Whole Blood 0013756 -120 BP-68160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PIGE-0005-SM-DLZQM B1 8.6 Blood Whole Blood 0013756 -120 BP-68162 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.97429 708663 0.964923 0.980981 0.804236 18995 1 76 0.00277101 128 0 9.0969e+07 0.0343246 165949 9.27327e+07 6.64659e+06 19007 4.50292e+07 0 0.160687 0.980981 0.78894 9.0969e+07 0.00480133 2.07492e+07 1.06249e+08 2.07377e+07 154 2.1115e+07 2.2976e+07 0.00377925 2.09942e+07 49.8565 0.00178954 0.987671 0 49.9862 GTEX-1PIGE-0126-SM-EVYBJ 0 B1 6 pieces; well dissected; <2% dermal fat 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 475 899 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.99216 360860 0.974764 0.992733 0.831695 23750 1 76 0.00203388 326 0 9.24016e+07 0.0249149 709989 9.3078e+07 4.12535e+06 23779 4.60721e+07 0 0.143069 0.992733 0.825651 9.24016e+07 0.00300434 1.98901e+07 9.23458e+06 2.01448e+07 261 2.00991e+07 1.73432e+07 0.00251883 1.99866e+07 49.8597 0.00762789 0.993307 0 50.318 GTEX-1PIGE-0226-SM-E76OT 1 B1 2 pieces; sliver of tendon in 1 piece, 2% of area [arrowed] 8.2 Muscle Muscle - Skeletal 0011907 483 891 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994301 366591 0.983868 0.995667 0.877606 19887 1 76 0.00177652 278 0 8.84888e+07 0.0159223 1.38298e+06 8.88739e+07 5.44694e+06 19895 4.40945e+07 0 0.106262 0.995667 0.873803 8.84888e+07 0.00265406 1.93687e+07 9.27762e+06 1.95646e+07 259 1.96311e+07 1.7833e+07 0.00221469 1.94046e+07 49.7099 0.0155611 0.997033 0 50.2516 GTEX-1PIGE-0326-SM-E8VNQ 1 B1 2 pieces; well trimmed; 5 & 10% internal & external fat 7.6 Nerve Nerve - Tibial 0001323 487 887 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986078 646820 0.965938 0.987427 0.772059 24217 1 76 0.00184393 192 0 8.44655e+07 0.0337313 322664 8.5541e+07 4.21814e+06 24260 4.2059e+07 0 0.193879 0.987427 0.762351 8.44655e+07 0.00253972 1.85338e+07 6.64385e+06 1.86567e+07 202 1.86021e+07 1.39581e+07 0.00219135 1.86974e+07 50.1279 0.00377204 0.988776 0 50.1653 GTEX-1PIGE-0426-SM-E9J3P 0 B1 2 pieces; well trimmed, no extraneous tissues; no lesions 7.2 Blood Vessel Artery - Tibial 0007610 494 880 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.982539 1.00213e+06 0.932569 0.983153 0.798489 20623 1 76 0.00179287 159 0 7.39271e+07 0.0671009 478990 7.51939e+07 3.67906e+06 20635 3.68411e+07 0 0.134079 0.983153 0.785037 7.39271e+07 0.00254888 1.49971e+07 3.65079e+07 1.53048e+07 174 1.51656e+07 1.28762e+07 0.00217064 1.52128e+07 50.0777 0.00637006 0.983767 0 50.5077 GTEX-1PIGE-0526-SM-DTXFA 0 B1 2 pieces; 20% fibrous content in 1 piece, 5% in other 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 486 888 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994551 459951 0.975789 0.995209 0.838678 23206 1 76 0.0020865 216 0 9.14534e+07 0.0238279 404530 9.18936e+07 4.5889e+06 23238 4.5575e+07 0 0.137111 0.995209 0.83466 9.14534e+07 0.00249942 2.00329e+07 8.97247e+06 2.01898e+07 254 2.02434e+07 1.76094e+07 0.00229283 2.00381e+07 49.7452 0.00440215 0.995867 0 50.195 GTEX-1PIGE-0726-SM-DPRZD 0 B1 2 pieces; well trimmed; no lesions 7.6 Thyroid Thyroid 0002046 508 866 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992877 389916 0.965116 0.99374 0.759744 23382 1 76 0.00199776 134 0 6.84808e+07 0.0345637 138530 6.89122e+07 3.5435e+06 23417 3.41226e+07 0 0.205372 0.99374 0.754988 6.84808e+07 0.0026293 1.4968e+07 6.17462e+06 1.50489e+07 145 1.50474e+07 1.19916e+07 0.00231325 1.5024e+07 49.9611 0.00201024 0.994602 0 50.1347 GTEX-1PIGE-0826-SM-DTXFB 0 B1 6 pieces; up to 40% adventitial stromal content 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 520 854 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994482 570142 0.972604 0.995111 0.813149 22882 1 76 0.00204406 205 0 8.37068e+07 0.0271061 778329 8.4118e+07 3.98984e+06 22907 4.17092e+07 0 0.159455 0.995111 0.809174 8.37068e+07 0.00242456 1.81978e+07 6.85894e+06 1.82774e+07 208 1.83097e+07 1.44596e+07 0.00223419 1.82167e+07 49.8728 0.00925282 0.995741 0 50.1092 GTEX-1PIGE-0926-SM-E9U5Z 0 B1 6 pieces; well dissected; mild to moderate squamous hyperplasia with focal lymphoid aggregates consistent with gastric reflux; no submucosal glands 9.5 Esophagus Esophagus - Mucosa 0006920 529 845 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10742,LCSET-10947 05/01/2017 TruSeq.v1 RNASEQ 0.981103 169900 0.971725 0.983061 0.815248 21741 1 76 0.00208467 145 0 6.81524e+07 0.0279584 446932 6.93268e+07 6.65201e+06 21755 3.38715e+07 0 0.156477 0.983061 0.801439 6.81524e+07 0.00324607 1.52098e+07 7.98486e+06 1.52619e+07 158 1.52987e+07 1.29136e+07 0.00266421 1.53009e+07 50.0037 0.00644675 0.985019 0 50.0855 GTEX-1PIGE-1026-SM-EWRMU 0 B1 6 pieces; well dissected; no lesions 7.5 Esophagus Esophagus - Muscularis 0004648 533 841 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987861 310841 0.975322 0.990927 0.834914 23734 1 76 0.00247907 281 0 1.03344e+08 0.0243627 922249 1.0429e+08 7.66347e+06 23766 5.14099e+07 0 0.140408 0.990927 0.827339 1.03344e+08 0.00314013 2.23995e+07 9.12531e+06 2.26916e+07 313 2.26939e+07 1.82485e+07 0.00280085 2.26645e+07 49.9676 0.00884312 0.993994 0 50.3238 GTEX-1PIGE-1126-SM-EWRMV 1 B1 6 pieces; well dissected, full thickness gastric mucosa and muscularis 7.9 Stomach Stomach 0000945 518 856 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988706 342419 0.977939 0.991274 0.838574 23699 1 76 0.00240075 381 0 1.07483e+08 0.0217345 774041 1.08429e+08 7.37529e+06 23730 5.34973e+07 0 0.139366 0.991274 0.831256 1.07483e+08 0.00300894 2.34186e+07 9.10665e+06 2.37245e+07 330 2.37446e+07 1.91278e+07 0.00269695 2.36327e+07 49.8819 0.00713867 0.993842 0 50.3244 GTEX-1PIGE-1226-SM-EVR3Q 0 B1 2 pieces; 1 piece with 10% fibrovascular content, other with <1% such content 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 535 839 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988849 304516 0.977557 0.990905 0.839641 24344 1 76 0.00233714 379 0 1.27244e+08 0.0221619 1.37654e+06 1.28412e+08 9.84606e+06 24378 6.33574e+07 0 0.137917 0.990905 0.832004 1.27244e+08 0.00353917 2.8012e+07 1.41126e+07 2.84128e+07 340 2.83575e+07 2.07328e+07 0.00293691 2.82994e+07 49.9487 0.0107197 0.992961 0 50.3551 GTEX-1PIGE-1426-SM-E9U61 2 B1 6 pieces; mucosa is main site of mild to moderate autolysis; muscle is intact 7.2 Colon Colon - Transverse 0001157 543 831 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989674 223193 0.968932 0.990413 0.787624 25293 1 76 0.00231003 276 0 9.23447e+07 0.0298995 765923 9.32385e+07 3.32636e+06 25336 4.60039e+07 0 0.181308 0.990413 0.780073 9.23447e+07 0.00304018 2.04384e+07 1.07673e+07 2.05647e+07 278 2.05334e+07 1.45465e+07 0.00267483 2.053e+07 49.9959 0.00821466 0.991152 0 50.1541 GTEX-1PIGE-1526-SM-DTXFC 1 B1 6 pieces; well dissected except for several foci of mucosa on 2 of 6 pieces, occupying 5%; arrowed 7.8 Colon Colon - Sigmoid 0001159 562 812 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994898 648132 0.972336 0.995548 0.811848 23644 1 76 0.00203374 220 0 9.31249e+07 0.0273451 635346 9.35413e+07 4.54143e+06 23683 4.64079e+07 0 0.160488 0.995548 0.808234 9.31249e+07 0.00242122 2.02966e+07 8.10585e+06 2.03515e+07 255 2.04221e+07 1.67402e+07 0.00222735 2.02824e+07 49.8285 0.00679214 0.996199 0 50.0675 GTEX-1PIGE-1626-SM-DPRZE 1 B1 2 pieces, 1 fragmented; active spermatogenesis 7.4 Testis Testis 0000473 548 826 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992292 517382 0.928064 0.993168 0.738988 33004 1 76 0.0019735 177 0 8.81305e+07 0.0715755 643259 8.87367e+07 4.60871e+06 33065 4.39211e+07 0 0.189075 0.993168 0.73394 8.81305e+07 0.00255018 1.82525e+07 1.0754e+07 1.82966e+07 197 1.83485e+07 1.59441e+07 0.00226159 1.82635e+07 49.8839 0.00724907 0.994045 0 50.0603 GTEX-1PIGE-1726-SM-E6CQH 1 B1 2 pieces; well preserved; no lesions 7.2 Prostate Prostate 0002367 573 801 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99064 471231 0.960614 0.992709 0.727326 25580 1 76 0.00257215 162 0 8.45169e+07 0.039086 445759 8.51377e+07 1.48101e+07 25633 4.20386e+07 0 0.233288 0.992709 0.722023 8.45169e+07 0.00390824 1.85376e+07 9.96908e+06 1.84929e+07 184 1.85119e+07 1.18352e+07 0.0032388 1.86806e+07 50.2268 0.00523574 0.994778 0 49.9396 GTEX-1PIGE-1826-SM-E8VOU 0 B1 6 pieces; several hair follicles; well trimmed; 1% dermal fat 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 567 807 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.980948 350889 0.971787 0.982008 0.872112 23615 1 76 0.00172481 383 0 1.01629e+08 0.0279985 801133 1.03491e+08 5.93794e+06 23632 5.0641e+07 0 0.0996747 0.982008 0.856421 1.01629e+08 0.00232258 2.21928e+07 1.60673e+07 2.25128e+07 344 2.23878e+07 2.09945e+07 0.00202337 2.2431e+07 50.0482 0.0077411 0.983068 0 50.3579 GTEX-1PIIG-0006-SM-DLZQF B1 7.5 Blood Whole Blood 0013756 1328 BP-68390 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.97845 597044 0.975318 0.984857 0.769907 19250 1 76 0.00268442 164 0 9.65227e+07 0.0241442 355925 9.80068e+07 6.79956e+06 19265 4.78178e+07 0 0.20541 0.984857 0.758248 9.65227e+07 0.00465845 2.17507e+07 6.56772e+07 2.17885e+07 182 2.20752e+07 2.0199e+07 0.00366501 2.20864e+07 50.0126 0.00363163 0.991264 0 50.0434 GTEX-1PIIG-0126-SM-E9J46 1 B1 2 pieces, well trimmed skeletal muscle 8.3 Muscle Muscle - Skeletal 0011907 1442 446 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.991742 709995 0.982813 0.992756 0.877683 19658 1 76 0.00158457 202 0 9.84611e+07 0.0169349 1.01272e+06 9.91796e+07 4.59837e+06 19673 4.90713e+07 0 0.10513 0.992756 0.871325 9.84611e+07 0.00234074 2.14924e+07 8.25539e+06 2.16959e+07 251 2.17188e+07 2.23533e+07 0.00196227 2.1561e+07 49.8177 0.010211 0.99377 0 50.2356 GTEX-1PIIG-0226-SM-EWRN6 1 B1 6 pieces; 10 to 25% internal (periadnexal) fat; trace of external fat (outlined); ~47 micron thick epidermis 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1443 445 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985228 365476 0.976466 0.988717 0.828205 22317 1 76 0.00248044 255 0 8.69772e+07 0.023188 488247 8.79698e+07 5.97077e+06 22346 4.32428e+07 0 0.148261 0.988717 0.81886 8.69772e+07 0.00334356 1.87567e+07 1.27366e+07 1.89398e+07 222 1.90233e+07 1.62121e+07 0.00290038 1.89473e+07 49.8999 0.00555017 0.992205 0 50.2429 GTEX-1PIIG-0326-SM-EVYBV 1 B1 2 pieces; mature adipose tissue and septal fibrous component (arrows) 5.5 Adipose Tissue Adipose - Subcutaneous 0002190 1445 443 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.987771 156047 0.97467 0.988096 0.810067 22614 1 76 0.00208862 168 0 7.17401e+07 0.0250128 696065 7.26044e+07 3.0722e+06 22631 3.57642e+07 0 0.164604 0.988096 0.800423 7.17401e+07 0.00296619 1.57955e+07 6.45289e+06 1.59478e+07 188 1.58701e+07 1.09261e+07 0.00252726 1.58973e+07 50.0428 0.00958709 0.988421 0 50.2399 GTEX-1PIIG-0526-SM-E6CQM 1 B1 2 pieces; spermatogenesis present 6.7 Testis Testis 0000473 1457 431 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990352 670051 0.91679 0.992285 0.717051 32972 1 76 0.00230203 166 0 8.45905e+07 0.0827855 464405 8.52482e+07 1.43639e+07 33029 4.20905e+07 0 0.199738 0.992285 0.711519 8.45905e+07 0.00333058 1.74461e+07 1.53095e+07 1.7078e+07 157 1.71821e+07 1.52238e+07 0.0028153 1.74848e+07 50.4365 0.00544768 0.994218 0 49.4669 GTEX-1PIIG-0626-SM-E8VMI 1 B1 2 pieces; congested adventitia measures up to 0.88mm 7.8 Blood Vessel Artery - Tibial 0007610 1459 429 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.987674 789869 0.978514 0.988913 0.849905 21290 1 76 0.00164689 274 0 9.76253e+07 0.0210639 419552 9.87198e+07 4.84649e+06 21306 4.862e+07 0 0.128608 0.988913 0.840483 9.76253e+07 0.00217594 2.07482e+07 8.88054e+06 2.0986e+07 262 2.09283e+07 2.06234e+07 0.00191109 2.09225e+07 49.9931 0.00424993 0.990152 0 50.2848 GTEX-1PIIG-0726-SM-E9J2I 1 B1 2 pieces; 10% and 15% external fat (outlined) and ~10% internal fat (arrow) 6.3 Nerve Nerve - Tibial 0001323 1461 427 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.97809 332503 0.965513 0.978859 0.705172 24934 1 76 0.00207791 215 0 9.60914e+07 0.0341931 537515 9.81667e+07 4.8517e+06 24993 4.78367e+07 0 0.260341 0.978859 0.690264 9.60914e+07 0.0030488 2.11314e+07 8.49085e+06 2.13596e+07 232 2.12194e+07 1.24374e+07 0.00256297 2.13498e+07 50.1533 0.00547553 0.979628 0 50.2686 GTEX-1PIIG-0926-SM-E6CQN 1 B1 6 pieces; target muscularis and adherent serosa 5.4 Esophagus Esophagus - Muscularis 0004648 1464 424 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.990422 233002 0.975858 0.991695 0.827332 23300 1 76 0.00227347 371 0 1.09602e+08 0.0239465 4.5806e+06 1.1052e+08 1.14578e+07 23326 5.4579e+07 0 0.148526 0.991695 0.820461 1.09602e+08 0.00324431 2.4041e+07 1.11274e+07 2.43825e+07 348 2.43716e+07 1.12827e+07 0.00275827 2.41814e+07 49.8041 0.0414457 0.992967 0 50.3526 GTEX-1PIIG-1226-SM-EXOIQ 1 B1 2 pieces; mild to moderated autolysis and congestion 5.5 Spleen Spleen 0002106 1467 421 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.962411 256815 0.954001 0.964144 0.741315 24626 1 76 0.00248019 208 0 8.83998e+07 0.0456202 1.35304e+06 9.16873e+07 5.62814e+06 24665 4.39673e+07 0 0.212687 0.964144 0.714734 8.83998e+07 0.00379333 1.90937e+07 1.50598e+07 1.93261e+07 231 1.92513e+07 1.18127e+07 0.00313558 1.93203e+07 50.0894 0.0147571 0.965877 0 50.3024 GTEX-1PIIG-1326-SM-EXOIR 1 B1 2 pieces; mild to moderate autolysis and marked central fatty degeneration 6 Liver Liver 0001114 1468 420 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.979028 282071 0.975626 0.980864 0.872725 20420 1 76 0.00217659 265 0 8.97579e+07 0.0242951 3.60774e+06 9.1509e+07 4.98943e+06 20431 4.469e+07 0 0.102901 0.980864 0.856025 8.97579e+07 0.00324661 1.97365e+07 1.7155e+07 2.03282e+07 326 2.00866e+07 7.25002e+06 0.0027106 2.01018e+07 50.019 0.039425 0.9827 0 50.7384 GTEX-1PIIG-1426-SM-EXOIS 2 B1 2 pieces; moderate to severe autolysis; ~20% external fat (outlined) 5.9 Adrenal Gland Adrenal Gland 0002369 1469 419 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.971771 339465 0.967687 0.973901 0.841698 22623 1 76 0.00204289 278 0 9.34352e+07 0.0319381 4.74776e+06 9.59391e+07 5.69322e+06 22644 4.64688e+07 0 0.125989 0.973901 0.819731 9.34352e+07 0.00371897 2.03193e+07 1.85926e+07 2.0679e+07 294 2.0607e+07 1.59237e+07 0.0028791 2.05898e+07 49.9791 0.0494873 0.976032 0 50.4387 GTEX-1PIIG-1826-SM-DTX7N 1 B1 2 pieces; congestion; anthracosis (arrows); enlarged pulmonary alveoli; focally collapsed alveolar spaces; skeletal muscle focus, possible floater (outlined) 6.5 Lung Lung 0008952 1472 416 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990413 709511 0.974996 0.992347 0.749278 22709 1 76 0.0023158 148 0 7.2762e+07 0.0246207 342684 7.33231e+07 3.63082e+06 22749 3.61595e+07 0 0.225718 0.992347 0.743543 7.2762e+07 0.00269959 1.61712e+07 6.04044e+06 1.61789e+07 163 1.63541e+07 1.1569e+07 0.00250732 1.61284e+07 49.6525 0.00467361 0.994281 0 50.0118 GTEX-1PIIG-2026-SM-DKTQ3 1 B1 2 pieces; trace adherent fat (outlined) and skeletal muscle(arrow); scattered small lymphocytic aggregates Thyroid Thyroid 0002046 1475 413 BP-80629 DNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1PIIG-2026-SM-DLT2G 1 B1 2 pieces; trace adherent fat (outlined) and skeletal muscle(arrow); scattered small lymphocytic aggregates Thyroid Thyroid 0002046 1475 413 BP-80629 DNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PIIG-2026-SM-EVR43 1 B1 2 pieces; trace adherent fat (outlined) and skeletal muscle(arrow); scattered small lymphocytic aggregates 5.7 Thyroid Thyroid 0002046 1475 413 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986465 255996 0.976277 0.988497 0.803771 24231 1 76 0.00232132 278 0 9.63073e+07 0.0233278 499946 9.7428e+07 7.97174e+06 24263 4.7925e+07 0 0.172506 0.988497 0.794525 9.63073e+07 0.00365685 2.1278e+07 9.25414e+06 2.15688e+07 262 2.15665e+07 1.71198e+07 0.00298771 2.14652e+07 49.8823 0.00513144 0.990528 0 50.3393 GTEX-1PIIG-2126-SM-EXUSD 1 B1 6 pieces; target muscularis 5.8 Colon Colon - Sigmoid 0001159 1475 413 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.973116 143550 0.969334 0.974172 0.833381 22379 1 76 0.0020961 166 0 6.81113e+07 0.0304065 1.35521e+06 6.99171e+07 3.93266e+06 22398 3.38965e+07 0 0.135953 0.974172 0.811856 6.81113e+07 0.00262402 1.44658e+07 5.79419e+06 1.4724e+07 187 1.46298e+07 1.00052e+07 0.00235977 1.46334e+07 50.0062 0.0193831 0.975228 0 50.4423 GTEX-1PIIG-2326-SM-DTXFR 1 B1 6 pieces; trace of periadnexal fat 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1478 410 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993285 635733 0.977475 0.9942 0.788396 23316 1 76 0.00212464 188 0 8.59553e+07 0.0222358 381992 8.64567e+07 4.45497e+06 23352 4.28116e+07 0 0.189079 0.9942 0.783824 8.59553e+07 0.00273697 1.90589e+07 1.04443e+07 1.90709e+07 201 1.91864e+07 1.5423e+07 0.00243052 1.9022e+07 49.7848 0.0044183 0.995115 0 50.0158 GTEX-1PIIG-2626-SM-E9U67 1 B1 1 piece: 90% adenohypophysis and 10% neurohypophysis (outlined); 7.3 Pituitary Pituitary 0000007 1480 408 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.99252 312429 0.96775 0.993336 0.749621 25305 1 76 0.00185923 273 0 1.04395e+08 0.0319557 807068 1.05095e+08 3.64629e+06 25360 5.20511e+07 0 0.218129 0.993336 0.744626 1.04395e+08 0.00269236 2.27214e+07 1.44978e+07 2.28896e+07 296 2.2896e+07 1.59396e+07 0.00227546 2.28025e+07 49.8976 0.00767942 0.994152 0 50.1843 GTEX-1PIIG-2726-SM-E76PQ 2 B1 4 pieces; attached meninges (arrows) 6.7 Brain Brain - Cortex 0001870 1481 407 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992878 689135 0.967913 0.994539 0.836017 25291 1 76 0.00195633 374 0 1.15767e+08 0.0316553 4.46692e+06 1.16403e+08 7.54688e+06 25315 5.76454e+07 0 0.131896 0.994539 0.831451 1.15767e+08 0.00288363 2.55052e+07 1.81098e+07 2.56965e+07 345 2.57794e+07 1.49363e+07 0.00241921 2.55793e+07 49.8052 0.0383746 0.9962 0 50.1867 GTEX-1PIIG-2826-SM-DTX7O 1 B1 4 pieces; attached meninges; Purkinje cells present 6.9 Brain Brain - Cerebellum 0002037 1482 406 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989747 746062 0.954789 0.991836 0.740685 23832 1 76 0.00215652 164 0 8.23408e+07 0.0448286 1.29498e+06 8.30186e+07 3.6338e+06 23858 4.09259e+07 0 0.214104 0.991836 0.734638 8.23408e+07 0.00265458 1.79755e+07 9.75858e+06 1.79902e+07 202 1.81714e+07 1.08428e+07 0.00240502 1.79495e+07 49.6928 0.0155987 0.993925 0 50.0204 GTEX-1POEN-0002-SM-DE1JF B1 Blood Whole Blood 0013756 1138 BP-68510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/29/2015 LCSET-10232,LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1POEN-0002-SM-DLIPZ B1 Blood Whole Blood 0013756 1138 BP-68510 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/29/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1POEN-0005-SM-DLZQN B1 6.2 Blood Whole Blood 0013756 1138 BP-68543 RNA isolation_PAXgene Blood RNA (Manual) 10/29/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.964044 361472 0.98463 0.970316 0.81094 19301 1 76 0.00217473 139 0 1.04267e+08 0.0137287 281016 1.07456e+08 7.99351e+06 19308 5.15787e+07 0 0.17369 0.970316 0.786868 1.04267e+08 0.00413917 2.47064e+07 1.57231e+08 2.47193e+07 166 2.50442e+07 2.96403e+07 0.0031506 2.50596e+07 50.0154 0.00261517 0.976589 0 50.0131 GTEX-1POEN-0126-SM-EYYXJ 0 B1 6 pieces, mild dermal fat (Rep delineated); squamous epithelium up to ~50 microns 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1159 749 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988382 213888 0.974787 0.991087 0.808679 23664 1 76 0.00215589 198 0 7.66577e+07 0.0249082 305310 7.73471e+07 2.4929e+06 23689 3.8142e+07 0 0.166108 0.991087 0.801472 7.66577e+07 0.00353357 1.67139e+07 7.5676e+06 1.68405e+07 179 1.68806e+07 1.43751e+07 0.00284285 1.68719e+07 49.9871 0.00394727 0.993792 0 50.1886 GTEX-1POEN-0226-SM-EYYXE 0 B1 2 pieces, trace fascia 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 1164 744 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985845 155677 0.972953 0.988855 0.803004 23446 1 76 0.00236027 170 0 7.67308e+07 0.026749 400827 7.75956e+07 2.93678e+06 23474 3.81614e+07 0 0.169949 0.988855 0.794055 7.67308e+07 0.00336669 1.67847e+07 6.5408e+06 1.69934e+07 194 1.70214e+07 1.21706e+07 0.00286195 1.69754e+07 49.9324 0.00516559 0.991866 0 50.309 GTEX-1POEN-0326-SM-EYYWB 0 B1 2 pieces, discontinuous rims of adherent fat up to ~0.7mm, rep delineated 6.4 Nerve Nerve - Tibial 0001323 1169 739 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982148 555849 0.970577 0.98567 0.801065 24380 1 76 0.00220305 214 0 9.00416e+07 0.0290836 318076 9.13506e+07 3.00429e+06 24417 4.47442e+07 0 0.169513 0.98567 0.789585 9.00416e+07 0.0039288 1.96475e+07 8.05506e+06 1.98585e+07 250 1.9917e+07 1.52331e+07 0.00306284 1.98857e+07 49.9607 0.00348192 0.989192 0 50.267 GTEX-1POEN-0526-SM-EVYC1 0 B1 2 pieces, no adherent fat or significant atherosis 7.1 Blood Vessel Artery - Tibial 0007610 1173 735 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.99176 344756 0.975351 0.992389 0.833726 21590 1 76 0.00187779 278 0 9.99719e+07 0.0242656 555550 1.00739e+08 4.28748e+06 21615 4.98368e+07 0 0.141625 0.992389 0.82738 9.99719e+07 0.00302291 2.12068e+07 7.34829e+06 2.15069e+07 308 2.14148e+07 1.90313e+07 0.00244999 2.13624e+07 49.9388 0.00551477 0.993018 0 50.3513 GTEX-1POEN-0626-SM-EVR4B 1 B1 2 pieces, moderate/marked interstitial fibrosis/ischemic changes 5.5 Heart Heart - Left Ventricle 0006566 1180 728 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98647 211693 0.980677 0.988376 0.8743 22080 1 76 0.00218897 271 0 9.40529e+07 0.0191188 7.17671e+06 9.5159e+07 6.96037e+06 22092 4.68342e+07 0 0.106377 0.988376 0.864137 9.40529e+07 0.00354513 2.0822e+07 8.56822e+06 2.11445e+07 320 2.11398e+07 1.57556e+07 0.00286574 2.09908e+07 49.8232 0.0754182 0.990283 0 50.3843 GTEX-1POEN-0726-SM-DTXDU 1 B1 2 pieces, no abnormalities, ~50% interstitial fat 5.7 Heart Heart - Atrial Appendage 0006631 1182 726 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992237 395150 0.981061 0.993179 0.849411 23139 1 76 0.00243148 368 0 1.30143e+08 0.0187914 8.78544e+06 1.31037e+08 7.09007e+06 23167 6.48538e+07 0 0.13165 0.993179 0.843617 1.30143e+08 0.00285205 2.87481e+07 2.24624e+07 2.92885e+07 390 2.94183e+07 1.11446e+07 0.00264156 2.87247e+07 49.4036 0.0670454 0.994121 0 50.4656 GTEX-1POEN-0926-SM-DTX88 1 B1 2 pieces, inactive ductal/lobular elements delineated (rep) 6.6 Breast Breast - Mammary Tissue 0008367 1195 713 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990606 543143 0.966657 0.992529 0.737562 25706 1 76 0.00213796 168 0 8.38254e+07 0.0329399 264696 8.44564e+07 3.95774e+06 25742 4.1683e+07 0 0.229096 0.992529 0.732051 8.38254e+07 0.00248298 1.84519e+07 8.31177e+06 1.84967e+07 180 1.86658e+07 1.41508e+07 0.00231014 1.84388e+07 49.6941 0.00313411 0.994452 0 50.0607 GTEX-1POEN-1026-SM-E8VNF 1 B1 6 pieces, layer of adherent serosa/fat up to ~1mm 5.5 Blood Vessel Artery - Aorta 0001496 1198 710 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.959108 309787 0.968387 0.960178 0.776809 23540 1 76 0.00200884 209 0 9.46658e+07 0.031159 609244 9.85919e+07 5.55634e+06 23575 4.7096e+07 0 0.191578 0.960178 0.745875 9.46658e+07 0.00261161 2.03247e+07 9.07916e+06 2.05437e+07 252 2.04368e+07 1.4434e+07 0.00230989 2.05408e+07 50.1269 0.00617945 0.961248 0 50.268 GTEX-1POEN-1626-SM-EVYC2 1 B1 2 pieces, trace mesothelial hyerplasia 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1218 690 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.980569 331598 0.974397 0.98107 0.858325 22606 1 76 0.00203991 263 0 8.53803e+07 0.0253185 970318 8.70278e+07 3.88306e+06 22623 4.25423e+07 0 0.116072 0.98107 0.842077 8.53803e+07 0.00316972 1.88095e+07 9.75407e+06 1.91179e+07 256 1.90053e+07 1.33809e+07 0.00260453 1.89758e+07 49.9611 0.0111495 0.981571 0 50.4066 GTEX-1POEN-2026-SM-E6CRL 3 B1 6 pieces, glandular mcuosa up to ~0.6mm; glandular elements totally sloughed, lamina propria only 5.6 Colon Colon - Transverse 0001157 1232 676 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991128 207397 0.96766 0.992824 0.812996 23585 1 76 0.00247062 158 0 7.11196e+07 0.0321186 1.934e+06 7.16337e+07 1.24276e+07 23606 3.53872e+07 0 0.154664 0.992824 0.807162 7.11196e+07 0.0034683 1.54462e+07 6.55895e+06 1.54596e+07 185 1.54303e+07 9.79106e+06 0.00296861 1.55854e+07 50.25 0.0269985 0.99452 0 50.0217 GTEX-1POEN-2226-SM-DPRXV 1 B1 4 pieces (fragmented), ~70% glandular elements, ensquared 7.9 Salivary Gland Minor Salivary Gland 0006330 1238 670 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.990064 238136 0.981717 0.990842 0.845611 22154 1 76 0.00238573 170 0 7.36347e+07 0.016636 170749 7.43153e+07 3.94463e+06 22169 3.66435e+07 0 0.136106 0.990842 0.837867 7.36347e+07 0.00294374 1.71016e+07 2.36431e+07 1.73913e+07 190 1.73902e+07 1.38425e+07 0.00266451 1.71597e+07 49.6664 0.00229763 0.99162 0 50.4199 GTEX-1POEN-2326-SM-E9J2L 0 B1 6 pieces, mild/moderate dermal fat; squamous epithelium is ~50-60 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1240 668 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.978985 231563 0.97387 0.979577 0.76348 23352 1 76 0.00199898 182 0 7.92077e+07 0.0259524 487738 8.08591e+07 3.91252e+06 23381 3.94697e+07 0 0.21039 0.979577 0.747888 7.92077e+07 0.00270364 1.74717e+07 8.31634e+06 1.75991e+07 197 1.74997e+07 1.1379e+07 0.0023511 1.76185e+07 50.1691 0.00603195 0.98017 0 50.1818 GTEX-1POEN-2726-SM-E9U6B 1 B1 2 pieces, no abnormalities 6.5 Brain Brain - Cerebellum 0002037 1303 605 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.98977 317204 0.94393 0.990524 0.73012 24079 1 76 0.00218044 270 0 8.76109e+07 0.0557629 1.37667e+06 8.8449e+07 3.18675e+06 24112 4.36651e+07 0 0.21381 0.990524 0.723202 8.76109e+07 0.00302128 1.8855e+07 1.51944e+07 1.89665e+07 257 1.89167e+07 1.00353e+07 0.00260054 1.89637e+07 50.0621 0.0155645 0.991279 0 50.1474 GTEX-1POEN-2826-SM-DPRZP 1 B1 1 piece, adenohypophysis; ~4x1.5mm nubbin of neurohypophysis (delineated) is ~10% of tissue 6.7 Pituitary Pituitary 0000007 1306 602 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994077 328780 0.958849 0.994946 0.76848 25017 1 76 0.00197252 140 0 6.74176e+07 0.0409078 430472 6.776e+07 3.30043e+06 25050 3.35948e+07 0 0.190369 0.994946 0.764596 6.74176e+07 0.00274555 1.43145e+07 8.08042e+06 1.44798e+07 159 1.44568e+07 1.01737e+07 0.0023587 1.43958e+07 49.8943 0.00635289 0.995815 0 50.2869 GTEX-1PPGY-0004-SM-DE1J9 B1 Blood Whole Blood 0013756 674 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PPGY-0004-SM-DLIQ8 B1 Blood Whole Blood 0013756 674 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PPGY-0326-SM-DTXFD 1 B1 2 pieces; mature adipose tissue and fibrovascular component 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 830 883 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993615 460076 0.976567 0.994519 0.837229 24329 1 76 0.00204892 381 0 1.06294e+08 0.0230837 384736 1.06879e+08 5.65586e+06 24362 5.29532e+07 0 0.139338 0.994519 0.832641 1.06294e+08 0.00265641 2.33228e+07 1.02029e+07 2.34412e+07 338 2.35098e+07 2.12811e+07 0.00235239 2.3349e+07 49.8284 0.00359972 0.995423 0 50.1267 GTEX-1PPGY-0426-SM-DTXFE 1 B1 2 pieces; trace of fat and vessels (arrows) 8.7 Muscle Muscle - Skeletal 0011907 832 881 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99514 757444 0.98492 0.996049 0.885911 20599 1 76 0.00182642 272 0 1.17759e+08 0.0148106 1.04356e+06 1.18227e+08 5.77351e+06 20616 5.86997e+07 0 0.0990089 0.996049 0.882411 1.17759e+08 0.00219488 2.55167e+07 1.03949e+07 2.58322e+07 316 2.59411e+07 2.81106e+07 0.00201048 2.54964e+07 49.5677 0.00882677 0.996958 0 50.3072 GTEX-1PPGY-0526-SM-E9J3Q 1 B1 2 pieces; trace of external/internal fat (arrows) 7.6 Nerve Nerve - Tibial 0001323 837 876 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.986373 613254 0.962148 0.987153 0.730862 24712 1 76 0.00203785 177 0 8.68779e+07 0.0375558 204307 8.80085e+07 4.06738e+06 24765 4.32738e+07 0 0.231285 0.987153 0.721473 8.68779e+07 0.00268958 1.89966e+07 9.70632e+06 1.91254e+07 197 1.90631e+07 1.32012e+07 0.00236346 1.9132e+07 50.0902 0.00232145 0.987934 0 50.169 GTEX-1PPGY-0726-SM-EXOJ7 1 B1 2 pieces; spermatogenesis present 7.2 Testis Testis 0000473 840 873 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98603 211259 0.923715 0.987892 0.727543 31570 1 76 0.00213034 126 0 5.8666e+07 0.0759187 296471 5.9385e+07 3.59747e+06 31613 2.91888e+07 0 0.196172 0.987892 0.718734 5.8666e+07 0.00333994 1.20567e+07 6.52408e+06 1.2116e+07 115 1.21155e+07 1.05764e+07 0.002734 1.21496e+07 50.0703 0.00499235 0.989754 0 50.1226 GTEX-1PPGY-0926-SM-DTXFF 1 B1 2 pieces; fibromuscular and adipose tissue; one with ~50% adipose tissue (outlined); congestion 7.6 Heart Heart - Atrial Appendage 0006631 905 808 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993822 489818 0.980148 0.994914 0.802908 23020 1 76 0.00212952 204 0 8.57855e+07 0.0195552 2.06364e+06 8.62241e+07 4.45093e+06 23042 4.27268e+07 0 0.17724 0.994914 0.798824 8.57855e+07 0.00269118 1.88894e+07 1.02834e+07 1.89665e+07 218 1.9082e+07 1.38489e+07 0.00241004 1.88602e+07 49.7076 0.0239334 0.996005 0 50.1018 GTEX-1PPGY-1126-SM-E76OU 1 B1 2 pieces; fatty streaks next to capillaries; accentuation of interstitium with congestion 7 Heart Heart - Left Ventricle 0006566 909 804 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994317 150790 0.982045 0.995673 0.84808 21475 1 76 0.00204291 368 0 9.40418e+07 0.01781 5.88869e+06 9.44505e+07 6.03888e+06 21486 4.68803e+07 0 0.133965 0.995673 0.844411 9.40418e+07 0.00279249 2.08682e+07 1.49098e+07 2.11615e+07 335 2.11769e+07 1.07766e+07 0.00241719 2.09644e+07 49.7479 0.0623469 0.99703 0 50.3488 GTEX-1PPGY-1226-SM-E76OV 1 B1 6 pieces; target muscularis with attached serosa (arrows) 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 915 798 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.990993 299236 0.969207 0.992236 0.807782 23846 1 76 0.00215602 371 0 9.55671e+07 0.0305808 2.52661e+06 9.63148e+07 6.11576e+06 23874 4.75817e+07 0 0.161424 0.992236 0.801511 9.55671e+07 0.00303083 2.09515e+07 1.02281e+07 2.12425e+07 342 2.12023e+07 1.24468e+07 0.00259288 2.11019e+07 49.8814 0.0262329 0.993479 0 50.3448 GTEX-1PPGY-1426-SM-EVR3R 1 B1 2 pieces; two empty spaces (simple cysts ?) (arrows) 7 Thyroid Thyroid 0002046 912 801 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987476 323353 0.971882 0.989425 0.8151 25555 1 76 0.00229046 281 0 1.22817e+08 0.0277526 252497 1.2413e+08 9.75498e+06 25594 6.11374e+07 0 0.156781 0.989425 0.806481 1.22817e+08 0.0036736 2.69292e+07 1.1075e+07 2.72186e+07 329 2.72204e+07 2.4593e+07 0.00298067 2.71547e+07 49.9396 0.00203414 0.991373 0 50.2673 GTEX-1PPGY-1526-SM-EVYBK 1 B1 3 pieces; fibrovascular and adipose tissue; no ductal structures identified 5.6 Breast Breast - Mammary Tissue 0008367 916 797 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.982096 228577 0.977403 0.982596 0.79506 22747 1 76 0.00215663 169 0 7.7842e+07 0.0222689 364673 7.92208e+07 3.70688e+06 22772 3.878e+07 0 0.182344 0.982596 0.781222 7.7842e+07 0.00326831 1.71561e+07 8.20887e+06 1.73724e+07 185 1.73135e+07 1.36466e+07 0.00271219 1.72598e+07 49.9224 0.00460325 0.983096 0 50.3132 GTEX-1PPGY-1626-SM-EVYBL 1 B1 6 pieces; well trimmed skin with trace of periadnexal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 918 795 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989513 389683 0.975465 0.990294 0.78952 23549 1 76 0.00206508 193 0 8.48045e+07 0.0243212 374251 8.56357e+07 3.81713e+06 23586 4.22638e+07 0 0.185945 0.990294 0.781857 8.48045e+07 0.00314857 1.85809e+07 8.78498e+06 1.87608e+07 201 1.87298e+07 1.48644e+07 0.0026064 1.86809e+07 49.9347 0.00437027 0.991074 0 50.2408 GTEX-1PPGY-1726-SM-EVR3S 1 B1 6 pieces; superficial desquamation; squamous epithelium up to 0.42mm 5.9 Esophagus Esophagus - Mucosa 0006920 920 793 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986405 252042 0.973916 0.988192 0.803891 23117 1 76 0.00232845 269 0 9.5345e+07 0.0258269 907659 9.64843e+07 7.29617e+06 23138 4.74609e+07 0 0.170025 0.988192 0.794398 9.5345e+07 0.00367978 2.12743e+07 1.05365e+07 2.1544e+07 313 2.14748e+07 1.40333e+07 0.00300289 2.15081e+07 50.0387 0.00940732 0.989978 0 50.3149 GTEX-1PPGY-1826-SM-EXOJ8 2 B1 2 pieces; moderate autolysis and severe congestion with red blood cells filling alveolar spaces; anthracosis (rep arrowed) 6.4 Lung Lung 0008952 919 794 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.9649 166459 0.959466 0.967309 0.7216 23753 1 76 0.00248943 137 0 7.35453e+07 0.0401833 438807 7.60308e+07 4.80757e+06 23796 3.65119e+07 0 0.237866 0.967309 0.69801 7.35453e+07 0.00415395 1.60051e+07 6.61147e+06 1.61379e+07 158 1.60601e+07 1.0433e+07 0.00331962 1.62385e+07 50.2762 0.00577144 0.969718 0 50.2066 GTEX-1PPGY-2826-SM-DTX9H 2 B1 6 pieces; moderately to severely autolyzed mucosa and preserved muscularis 5.6 Colon Colon - Transverse 0001157 938 775 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989328 961154 0.972093 0.99141 0.815788 24926 1 76 0.00210006 374 0 1.10044e+08 0.0275796 1.24524e+06 1.10998e+08 5.53759e+06 24965 5.46845e+07 0 0.156305 0.99141 0.80878 1.10044e+08 0.00260166 2.38267e+07 9.62682e+06 2.39332e+07 364 2.41934e+07 1.74677e+07 0.00235033 2.37813e+07 49.5705 0.0112186 0.993491 0 50.1114 GTEX-1PPGY-2926-SM-DPRZF 1 B1 1 piece; mildly autolyzed adenohypophysis; congestion; focal calcification (outlined) 7.3 Pituitary Pituitary 0000007 964 749 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994209 348306 0.965885 0.99513 0.795345 24846 1 76 0.00192788 160 0 7.67023e+07 0.0338553 474218 7.70777e+07 4.26048e+06 24879 3.82306e+07 0 0.17054 0.99513 0.791471 7.67023e+07 0.00279763 1.63973e+07 8.96856e+06 1.65754e+07 192 1.65781e+07 1.30607e+07 0.00236235 1.64597e+07 49.8208 0.00615247 0.996051 0 50.2701 GTEX-1PPGY-3126-SM-EXUSR 1 B1 5 pieces; minute meningeal calcifications (outlined) 7 Brain Brain - Cortex 0001870 973 740 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.988812 495520 0.966209 0.98986 0.840381 23002 1 76 0.00191216 185 0 6.9151e+07 0.0334982 3.46464e+06 6.98593e+07 1.97897e+06 23018 3.44298e+07 0 0.125828 0.98986 0.83186 6.9151e+07 0.00253 1.52133e+07 7.13438e+06 1.55256e+07 215 1.542e+07 7.84093e+06 0.00222075 1.53748e+07 49.9268 0.0495945 0.990909 0 50.508 GTEX-1PPH6-0005-SM-DLZQP B1 7.1 Blood Whole Blood 0013756 1193 BP-68602 RNA isolation_PAXgene Blood RNA (Manual) 11/02/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.971143 659897 0.96952 0.978682 0.781586 18752 1 76 0.00250704 122 0 8.97134e+07 0.0297605 169960 9.16676e+07 6.73423e+06 18758 4.43665e+07 0 0.187934 0.978682 0.764924 8.97134e+07 0.00485184 2.05433e+07 1.22101e+08 2.06129e+07 146 2.09877e+07 2.21941e+07 0.00367041 2.08723e+07 49.8622 0.00185409 0.986221 0 50.0846 GTEX-1PPH6-2726-SM-DKTRV 1 B1 2 pieces; one has 20% stroma; other has 20% glands, 80% skin and stroma Salivary Gland Minor Salivary Gland 0006330 1307 1046 BP-78746 DNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1PPH6-2726-SM-DLT2K 1 B1 2 pieces; one has 20% stroma; other has 20% glands, 80% skin and stroma Salivary Gland Minor Salivary Gland 0006330 1307 1046 BP-78746 DNA Extraction from Paxgene-derived Lysate Plate Based 09/23/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PPH7-0004-SM-DE1J8 B1 Blood Whole Blood 0013756 -321 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PPH7-0004-SM-DLIPD B1 Blood Whole Blood 0013756 -321 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PPH7-0005-SM-CKZNE B1 7.5 Blood Whole Blood 0013756 -321 BP-68602 RNA isolation_PAXgene Blood RNA (Manual) 11/02/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.971517 1.19501e+06 0.96869 0.973824 0.80662 18077 1 76 0.00211778 195 0 1.29305e+08 0.0300085 324565 1.32781e+08 1.24573e+07 18083 6.42683e+07 0 0.16207 0.973824 0.785505 1.29305e+08 0.00389409 3.00803e+07 2.07485e+08 3.02595e+07 246 3.03759e+07 3.56298e+07 0.00300383 3.02942e+07 49.9326 0.00244436 0.97613 0 50.1485 GTEX-1PPH7-0126-SM-E6CPB 1 B1 1 centrally fragmented piece 6.4 Spleen Spleen 0002106 348 1020 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.987431 217501 0.960615 0.98912 0.764723 23592 1 76 0.00252991 139 0 6.6202e+07 0.0390607 790640 6.69302e+07 1.16013e+07 23620 3.29257e+07 0 0.195891 0.98912 0.756403 6.6202e+07 0.00367322 1.44238e+07 8.61025e+06 1.4439e+07 157 1.44091e+07 9.12814e+06 0.00310059 1.45618e+07 50.2636 0.0118129 0.990808 0 50.0263 GTEX-1PPH7-0226-SM-E76Q1 1 B1 2 pieces; extensive alveolar hemorrhage; smaller piece fragmented 7.9 Lung Lung 0008952 562 806 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991099 379833 0.972388 0.992533 0.755788 24250 1 76 0.00217826 173 0 8.51153e+07 0.0272556 283469 8.57556e+07 5.60859e+06 24286 4.23533e+07 0 0.216601 0.992533 0.750145 8.51153e+07 0.00307306 1.88237e+07 1.40998e+07 1.89077e+07 192 1.89695e+07 1.39294e+07 0.00262501 1.88796e+07 49.8812 0.00330555 0.993968 0 50.1113 GTEX-1PPH7-0826-SM-E8VNX 1 B1 2 pieces; fibroadipose tissue with no mammary ducts 6 Breast Breast - Mammary Tissue 0008367 594 774 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.978197 431447 0.979914 0.979556 0.841933 22476 1 76 0.00170679 375 0 1.00269e+08 0.0197777 1.0244e+06 1.02361e+08 5.74148e+06 22500 4.99203e+07 0 0.137981 0.979556 0.82472 1.00269e+08 0.00250905 2.21988e+07 1.00521e+07 2.24243e+07 358 2.23389e+07 1.63026e+07 0.00210736 2.24206e+07 50.0912 0.0100076 0.980914 0 50.2527 GTEX-1PPH7-1126-SM-DTX9A 1 B1 5 pieces; abundant untrimmed subcutaneous fat; up to 7 hairs per piece 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 608 760 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991352 647858 0.975798 0.993165 0.764561 22779 1 76 0.00195393 170 0 7.42833e+07 0.0239649 585182 7.47945e+07 3.30875e+06 22810 3.6951e+07 0 0.211237 0.993165 0.759335 7.42833e+07 0.00228299 1.64382e+07 7.3396e+06 1.64313e+07 173 1.66077e+07 1.23758e+07 0.00211816 1.63902e+07 49.6705 0.00782387 0.994978 0 49.9895 GTEX-1PPH7-2026-SM-E9J3N 1 B1 2 pieces; 1 has 50% epicardial fat; other has 50% fibrous & fatty epicardial tissue 6.9 Heart Heart - Left Ventricle 0006566 663 705 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.972591 288777 0.977637 0.973248 0.747899 23663 1 76 0.00213776 213 0 9.48952e+07 0.0220012 528130 9.75037e+07 5.04606e+06 23704 4.72488e+07 0 0.229738 0.973248 0.727891 9.48952e+07 0.00281139 2.10583e+07 1.2715e+07 2.12197e+07 227 2.11282e+07 1.54973e+07 0.00247435 2.12228e+07 50.1117 0.00541651 0.973905 0 50.1909 GTEX-1PPH7-2326-SM-EVYB8 1 B1 6 pieces; 2 pieces have sloughed epidermis; subcutaneous fat up to 2mm thick 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 820 548 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990885 264445 0.975685 0.991366 0.796155 23947 1 76 0.00199072 178 0 7.86365e+07 0.0240419 644986 7.93214e+07 3.43482e+06 23978 3.92033e+07 0 0.179529 0.991366 0.789281 7.86365e+07 0.00293938 1.73793e+07 7.17685e+06 1.75451e+07 189 1.74923e+07 1.38237e+07 0.00246482 1.74728e+07 49.9721 0.0081313 0.991846 0 50.2374 GTEX-1PPH7-2526-SM-E76OJ 1 B1 2 pieces; minimal stroma 7.4 Muscle Muscle - Skeletal 0011907 826 542 BP-79363 RNA Extraction from Paxgene-derived Lysate Plate Based 10/12/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.994095 592062 0.982168 0.995409 0.874321 19972 1 76 0.00157633 276 0 1.0049e+08 0.0176308 1.50165e+06 1.00954e+08 6.57848e+06 19980 5.00693e+07 0 0.107847 0.995409 0.870307 1.0049e+08 0.00231706 2.21826e+07 9.97239e+06 2.23463e+07 306 2.25171e+07 2.2635e+07 0.0019462 2.21314e+07 49.568 0.0148746 0.996724 0 50.1837 GTEX-1PPH7-2726-SM-EVYB9 1 B1 2 pieces; longitudinal sections with up to 30% fatty stroma; no plaque 6.7 Blood Vessel Artery - Tibial 0007610 832 536 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988345 3.02741e+06 0.85255 0.989207 0.71225 21018 1 76 0.00169625 196 0 9.09291e+07 0.146885 910976 9.19212e+07 4.27505e+06 21032 4.52818e+07 0 0.1403 0.989207 0.704563 9.09291e+07 0.00274263 1.69403e+07 1.27846e+08 1.76212e+07 206 1.75889e+07 1.36665e+07 0.00221898 1.71493e+07 49.3673 0.0099104 0.990069 0 50.9851 GTEX-1PPH8-0003-SM-DE1JH B1 Blood Whole Blood 0013756 -150 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1PPH8-0003-SM-DLIPC B1 Blood Whole Blood 0013756 -150 BP-68594 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/02/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PPH8-0006-SM-CY8GS B1 6.3 Blood Whole Blood 0013756 -150 BP-68602 RNA isolation_PAXgene Blood RNA (Manual) 11/02/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.987072 1.01222e+06 0.944652 0.989432 0.81617 19088 1 76 0.00532875 133 0 7.38704e+07 0.0546988 328897 7.46593e+07 9.3698e+06 19101 3.67198e+07 0 0.128483 0.989432 0.807544 7.38704e+07 0.00860041 1.59837e+07 4.95193e+07 1.61663e+07 136 1.61963e+07 1.58143e+07 0.00696068 1.61594e+07 49.943 0.0044053 0.991792 0 50.2839 GTEX-1PPH8-0126-SM-EWRN8 0 B1 6 pieces; trace adherent fat; squamous epithleium is ~35 microns 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 446 852 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984106 426152 0.971665 0.987431 0.812209 22307 1 76 0.00264102 207 0 8.60837e+07 0.0281235 511354 8.71794e+07 5.85975e+06 22331 4.28086e+07 0 0.159456 0.987431 0.802001 8.60837e+07 0.00388962 1.8979e+07 1.25415e+07 1.91838e+07 210 1.92098e+07 1.38184e+07 0.00324862 1.92186e+07 50.0115 0.00586553 0.990757 0 50.2684 GTEX-1PPH8-0226-SM-E8VND 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~35-40 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 453 845 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986201 203615 0.969516 0.987261 0.797372 21386 1 76 0.00201675 121 0 4.78628e+07 0.0302684 333523 4.84804e+07 2.57609e+06 21399 2.38494e+07 0 0.172145 0.987261 0.787214 4.78628e+07 0.00259712 1.04812e+07 5.51475e+06 1.05631e+07 119 1.05185e+07 7.94399e+06 0.00230662 1.05757e+07 50.1356 0.00687955 0.988322 0 50.1946 GTEX-1PPH8-0326-SM-E76PR 0 B1 2 pieces; interstitial fat/vascular elements are ~10% of tissue 8.5 Muscle Muscle - Skeletal 0011907 455 843 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992953 659309 0.98495 0.994542 0.874485 20402 1 76 0.00234129 385 0 1.2554e+08 0.0148644 2.73556e+06 1.26228e+08 7.97544e+06 20412 6.25219e+07 0 0.110465 0.994542 0.869712 1.2554e+08 0.00302202 2.79171e+07 2.29292e+07 2.82088e+07 350 2.82641e+07 2.15777e+07 0.00268111 2.80249e+07 49.7876 0.0216715 0.996132 0 50.2598 GTEX-1PPH8-0526-SM-E9J2J 0 B1 2 pieces, one with adherent fibrous tissue up to ~1.5mm; other is sectioned at a bifurcation; sample carefully 6.2 Blood Vessel Artery - Tibial 0007610 465 833 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.984078 178054 0.970664 0.984647 0.808732 21835 1 76 0.00206185 165 0 7.33447e+07 0.0290223 445663 7.44883e+07 3.75238e+06 21855 3.65354e+07 0 0.161932 0.984647 0.796315 7.33447e+07 0.00284429 1.57461e+07 5.15407e+06 1.59391e+07 181 1.5788e+07 1.17665e+07 0.00245284 1.59386e+07 50.2373 0.00598299 0.985216 0 50.3046 GTEX-1PPH8-0626-SM-EWRN9 0 B1 2 pieces, ~15-20% fascia/vascular elements; rep delineated 6 Adipose Tissue Adipose - Subcutaneous 0002190 473 825 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987308 310134 0.975268 0.99028 0.811219 23499 1 76 0.0028587 279 0 1.06272e+08 0.0244396 1.49879e+06 1.07315e+08 7.82522e+06 23532 5.28697e+07 0 0.164049 0.99028 0.803333 1.06272e+08 0.00353141 2.32058e+07 1.23194e+07 2.35062e+07 323 2.35232e+07 1.62947e+07 0.00318618 2.34597e+07 49.9324 0.0139663 0.993252 0 50.3215 GTEX-1PPH8-0826-SM-DTX9T 1 B1 2 pieces; ~30% adherent/interstitial fat/fibrous tissue, rep delineated 7.3 Adrenal Gland Adrenal Gland 0002369 478 820 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990502 955916 0.977334 0.992864 0.823772 22225 1 76 0.00240035 165 0 8.11923e+07 0.0223533 1.50803e+06 8.17759e+07 3.69658e+06 22247 4.03354e+07 0 0.153562 0.992864 0.817893 8.11923e+07 0.00291551 1.80108e+07 9.27398e+06 1.80105e+07 202 1.82192e+07 1.31557e+07 0.00265732 1.79693e+07 49.6548 0.0184411 0.995226 0 49.9996 GTEX-1PPH8-0926-SM-DTX9U 1 B1 2 pieces, trace adherent fat, delineated 6.1 Thyroid Thyroid 0002046 478 820 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991788 502456 0.960217 0.99347 0.711622 23743 1 76 0.00229922 157 0 8.12858e+07 0.0395375 341349 8.18201e+07 3.77243e+06 23785 4.04482e+07 0 0.248595 0.99347 0.706975 8.12858e+07 0.00254469 1.76869e+07 8.77253e+06 1.76883e+07 174 1.78401e+07 1.11868e+07 0.00242175 1.76559e+07 49.7405 0.00417194 0.995152 0 50.002 GTEX-1PPH8-1026-SM-DPRXN 1 B1 2 pieces (fragmented), ~30-40% interstitial hypertrophic mesothelium/fascia 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 482 816 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994831 241143 0.977316 0.995642 0.830582 21224 1 76 0.00219291 121 0 5.01458e+07 0.0224586 593190 5.03652e+07 2.92208e+06 21235 2.49877e+07 0 0.146735 0.995642 0.826962 5.01458e+07 0.00279334 1.10437e+07 5.4896e+06 1.11821e+07 126 1.11541e+07 8.59684e+06 0.00249288 1.11083e+07 49.8971 0.0117778 0.996453 0 50.3114 GTEX-1PPH8-1226-SM-DPRXO 1 B1 2 pieces, spermatogenesis is present, appears reduced 5.9 Testis Testis 0000473 486 812 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.989641 303937 0.932928 0.990564 0.729536 30753 1 76 0.00227029 120 0 5.32979e+07 0.0668194 508835 5.38057e+07 2.77081e+06 30796 2.65445e+07 0 0.203393 0.990564 0.722652 5.32979e+07 0.00309408 1.12211e+07 6.94412e+06 1.13183e+07 115 1.13185e+07 7.9456e+06 0.0026818 1.1262e+07 49.875 0.00945691 0.991487 0 50.2156 GTEX-1PPH8-1326-SM-DTXFO 1 B1 6 pieces; mucosa up to ~0.8mm, 20-25% thickness 6.8 Stomach Stomach 0000945 488 810 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994291 567869 0.972937 0.995143 0.805732 23596 1 76 0.00224691 213 0 9.06914e+07 0.0267932 674294 9.11341e+07 4.507e+06 23628 4.51901e+07 0 0.167205 0.995143 0.801818 9.06914e+07 0.00278955 1.98422e+07 9.06757e+06 1.99198e+07 248 1.99488e+07 1.48172e+07 0.00251799 1.98826e+07 49.9169 0.00739892 0.995995 0 50.0975 GTEX-1PPH8-1426-SM-DTXA3 1 B1 2 pieces, glandular hyperplastic pattern in one section; other is largely stromal with prominent peri-prostatic ganglion delineated 5.8 Prostate Prostate 0002367 494 804 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989777 435279 0.959252 0.991761 0.710917 24274 1 76 0.00230632 137 0 6.71361e+07 0.0405294 355601 6.76938e+07 3.52014e+06 24314 3.33831e+07 0 0.248335 0.991761 0.70506 6.71361e+07 0.00285335 1.47033e+07 6.58932e+06 1.47831e+07 152 1.49098e+07 9.12630e+06 0.00257929 1.47016e+07 49.6486 0.00525308 0.993745 0 50.1352 GTEX-1PPH8-1526-SM-E6CQO 1 B1 3 pieces, ~60% glandular elements (delineated); 1 fragment largely stroma, sample carefully 8.1 Salivary Gland Minor Salivary Gland 0006330 494 804 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990993 425338 0.970696 0.992941 0.777385 24747 1 76 0.00276942 168 0 8.73768e+07 0.0281406 274866 8.79979e+07 1.53496e+07 24784 4.34409e+07 0 0.193312 0.992941 0.771897 8.73768e+07 0.00357821 1.94954e+07 9.9316e+06 1.92433e+07 193 1.9315e+07 1.5195e+07 0.00317302 1.95817e+07 50.3429 0.00312355 0.994889 0 49.6746 GTEX-1PPH8-1626-SM-E6CQP 1 B1 6 pieces, squamous mucosa up to ~0.3mm, ~10-15% thickness; submucosal mucus glands present, rep delineated 8.8 Esophagus Esophagus - Mucosa 0006920 501 797 BP-79585 RNA Extraction from Paxgene-derived Lysate Plate Based 10/18/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990152 506208 0.976081 0.991937 0.824066 22253 1 76 0.00251315 208 0 9.14319e+07 0.0233906 277155 9.21751e+07 1.57671e+07 22276 4.55048e+07 0 0.152015 0.991937 0.817422 9.14319e+07 0.00345038 2.08761e+07 1.73427e+07 2.05886e+07 211 2.06518e+07 1.87304e+07 0.00298092 2.09618e+07 50.3724 0.00300683 0.993722 0 49.6533 GTEX-1PPH8-1826-SM-EVR44 1 B1 6 pieces, confirmed target muscularis 5.5 Esophagus Esophagus - Muscularis 0004648 508 790 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987022 263088 0.97391 0.989004 0.81027 23787 1 76 0.0026937 276 0 1.05028e+08 0.0258513 1.4996e+06 1.06196e+08 8.21398e+06 23816 5.22771e+07 0 0.16364 0.989004 0.80136 1.05028e+08 0.00393231 2.2775e+07 1.11475e+07 2.31521e+07 322 2.30356e+07 1.44788e+07 0.00331176 2.30718e+07 50.0393 0.014121 0.990986 0 50.4105 GTEX-1PPH8-1926-SM-DTXDN 1 B1 6 pieces, confirmed target muscularis 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 512 786 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.991671 516624 0.976307 0.9926 0.824967 21414 1 76 0.00214504 148 0 6.733e+07 0.023399 470242 6.7832e+07 3.28831e+06 21434 3.35333e+07 0 0.15134 0.9926 0.818862 6.733e+07 0.00272489 1.46403e+07 5.5485e+06 1.46932e+07 162 1.47406e+07 1.17533e+07 0.00243469 1.46535e+07 49.8519 0.00693245 0.993529 0 50.09 GTEX-1PPH8-2026-SM-DTX7P 2 B1 6 pieces, target mucosa up to ~0.3mm, moderately advanced autolysis 7 Colon Colon - Transverse 0001157 514 784 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.98892 684743 0.972011 0.991304 0.802553 23709 1 76 0.0027884 149 0 7.04531e+07 0.025865 698410 7.10712e+07 3.41454e+06 23738 3.49305e+07 0 0.169458 0.991304 0.795573 7.04531e+07 0.00324755 1.54355e+07 8.19911e+06 1.55835e+07 170 1.57024e+07 1.06449e+07 0.00301742 1.5464e+07 49.6175 0.00982691 0.993687 0 50.2387 GTEX-1PPH8-2226-SM-EWRN7 1 B1 5 pieces, confirmed target muscularis; trace autolyzed mucosa, stromal elements 6.6 Colon Colon - Sigmoid 0001159 520 778 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984131 428855 0.973443 0.988555 0.801781 24659 1 76 0.00285105 281 0 9.79074e+07 0.025725 574302 9.90409e+07 7.37945e+06 24697 4.8603e+07 0 0.171662 0.988555 0.792605 9.79074e+07 0.0036047 2.13421e+07 1.22141e+07 2.15801e+07 289 2.16906e+07 1.55294e+07 0.00321737 2.16131e+07 49.9104 0.00579863 0.992979 0 50.2773 GTEX-1PPH8-2326-SM-EAZ48 1 B1 2 pieces, generally mild focally moderate saponification; islets generally well preserved, rep delineated 5.6 Pancreas Pancreas 0001150 522 776 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990964 441859 0.968117 0.991631 0.77257 23760 1 76 0.00234479 160 0 1.01195e+08 0.0316683 270125 1.02049e+08 8.08128e+06 23803 5.04334e+07 0 0.195547 0.991631 0.766105 1.01195e+08 0.00300364 2.27457e+07 1.79482e+07 2.28989e+07 181 2.28581e+07 2.2211e+07 0.00267399 2.28561e+07 49.9978 0.00264702 0.992298 0 50.1678 GTEX-1PWST-0005-SM-DLZQC B1 7.6 Blood Whole Blood 0013756 971 BP-68854 RNA isolation_PAXgene Blood RNA (Manual) 11/09/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.915379 450348 0.981811 0.921396 0.808794 14507 1 76 0.00184313 72 0 9.76878e+07 0.0169306 38170 1.06021e+08 7.70397e+06 14508 4.8353e+07 0 0.173017 0.921396 0.74522 9.76878e+07 0.00426008 2.36442e+07 2.44019e+08 2.34912e+07 126 2.38615e+07 3.16747e+07 0.00304372 2.39229e+07 50.0642 0.000360021 0.927414 0 49.8377 GTEX-1PWST-0226-SM-E76QJ 0 B1 6 pieces, no significant dermal fat; mild dermal solar elastosis. Squamous epithlium is ~50-55 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1006 1304 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993259 368841 0.976828 0.994703 0.802745 23944 1 76 0.00188965 292 0 9.98664e+07 0.0228945 334659 1.00398e+08 6.50924e+06 23976 4.97567e+07 0 0.174083 0.994703 0.798493 9.98664e+07 0.00257185 2.20279e+07 9.14174e+06 2.21280e+07 280 2.21964e+07 1.92835e+07 0.00223026 2.20945e+07 49.8849 0.00333332 0.996148 0 50.1134 GTEX-1PWST-0326-SM-EAZ42 0 B1 2 pieces, trace fascia/vascular elements 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 1009 1301 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986156 412110 0.976046 0.987022 0.814273 22451 1 76 0.00201778 212 0 8.92023e+07 0.0237004 400717 9.03752e+07 7.92647e+06 22475 4.4433e+07 0 0.161773 0.987022 0.803706 8.92023e+07 0.00299564 1.93217e+07 9.54868e+06 1.95504e+07 224 1.94689e+07 1.6389e+07 0.00250628 1.94889e+07 50.0257 0.00443393 0.987888 0 50.2942 GTEX-1PWST-0426-SM-E76QV 0 B1 2 pieces. Atrophic fibers, ~30-40% interstitial fat. Evidence of chronic myositis. 7.5 Muscle Muscle - Skeletal 0011907 1010 1300 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992612 520878 0.98126 0.994154 0.8388 20627 1 76 0.0016043 386 0 1.01872e+08 0.018498 520204 1.02471e+08 6.7209e+06 20651 5.07548e+07 0 0.14246 0.994154 0.833896 1.01872e+08 0.0024156 2.25618e+07 9.31937e+06 2.27596e+07 335 2.28656e+07 1.98892e+07 0.00200932 2.25998e+07 49.7077 0.00507658 0.995695 0 50.2182 GTEX-1PWST-0626-SM-EVYBA 0 B1 2 pieces, no adherent fat; trace atherosis. Monckeberg medial sclerosis, rep foci delineated. 6.9 Blood Vessel Artery - Tibial 0007610 1014 1296 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990614 328806 0.973309 0.991232 0.788808 21178 1 76 0.00195952 169 0 8.57387e+07 0.026386 335586 8.64971e+07 3.60959e+06 21205 4.2727e+07 0 0.184502 0.991232 0.781891 8.57387e+07 0.00299538 1.84256e+07 6.78344e+06 1.86186e+07 200 1.85672e+07 1.57967e+07 0.00247713 1.85344e+07 49.9557 0.00387974 0.99185 0 50.2605 GTEX-1PWST-0726-SM-EWRMO 1 B1 2 pieces, regressive changes 6.7 Thyroid Thyroid 0002046 1017 1293 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984729 216110 0.965011 0.988174 0.710249 23765 1 76 0.00249033 163 0 8.21979e+07 0.0347712 280773 8.31817e+07 5.79392e+06 23814 4.08575e+07 0 0.254762 0.988174 0.70185 8.21979e+07 0.00315303 1.78502e+07 7.94574e+06 1.80581e+07 181 1.8101e+07 1.10658e+07 0.00281278 1.80618e+07 49.9459 0.00337542 0.991618 0 50.2895 GTEX-1PWST-0826-SM-DTXF1 1 B1 2 pieces, moderate edema/congestion 7.4 Lung Lung 0008952 1018 1292 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994773 497241 0.976879 0.99533 0.815522 23527 1 76 0.0020909 212 0 9.53316e+07 0.0227416 253382 9.57789e+07 4.84773e+06 23561 4.75052e+07 0 0.161357 0.99533 0.811713 9.53316e+07 0.00231741 2.10498e+07 9.23272e+06 2.11449e+07 255 2.12075e+07 1.89868e+07 0.00220409 2.10431e+07 49.8054 0.00264549 0.995886 0 50.1127 GTEX-1PWST-1026-SM-DTXF2 1 B1 2 pieces, marked chronic ischemic change, 3mm remote infarct delineated; patchy hyperemic foci suggest acute ischemic events 7 Heart Heart - Left Ventricle 0006566 1022 1288 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994064 542251 0.98444 0.995023 0.836269 21233 1 76 0.00161138 372 0 1.33511e+08 0.0154376 4.27551e+06 1.34179e+08 6.11835e+06 21249 6.65516e+07 0 0.148172 0.995023 0.832107 1.33511e+08 0.00201538 2.9037e+07 4.14199e+07 2.94006e+07 360 2.93741e+07 1.4374e+07 0.00181319 2.91824e+07 49.8362 0.0318643 0.995982 0 50.3111 GTEX-1PWST-1526-SM-E9IK5 2 B1 2 pieces variably autolytic; one with well preserved islets (rep delineated); other with advanced saponification (ensquared)-sample carefully Pancreas Pancreas 0001150 1030 1280 BP-81798 DNA Extraction from Paxgene-derived Lysate Plate Based 12/22/2016 LCSET-10755 04/03/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1PWST-1526-SM-EXOIT 2 B1 2 pieces variably autolytic; one with well preserved islets (rep delineated); other with advanced saponification (ensquared)-sample carefully 6.3 Pancreas Pancreas 0001150 1030 1280 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.982506 290821 0.960974 0.9841 0.737198 23845 1 76 0.00223741 172 0 9.25454e+07 0.0388319 302044 9.40407e+07 5.06353e+06 23875 4.60612e+07 0 0.223775 0.9841 0.725477 9.25454e+07 0.00341475 2.05034e+07 1.32341e+07 2.06718e+07 189 2.06408e+07 1.65591e+07 0.00282513 2.06807e+07 50.0482 0.00321184 0.985694 0 50.2046 GTEX-1PWST-1626-SM-EXOIU 2 B1 2 pieces, moderate congestion 6.9 Spleen Spleen 0002106 1031 1279 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.982264 264109 0.967477 0.98407 0.712775 23636 1 76 0.00252485 151 0 7.86916e+07 0.0317176 309232 7.99654e+07 4.77962e+06 23677 3.91084e+07 0 0.254702 0.98407 0.701421 7.86916e+07 0.00378385 1.73113e+07 9.88201e+06 1.74801e+07 165 1.74464e+07 1.16734e+07 0.0031532 1.74832e+07 50.0528 0.00386707 0.985876 0 50.2425 GTEX-1PWST-2126-SM-DPRZ5 2 B1 2 pieces, cortex, ~25% adherent/interstitial fibrous tissue, rep delineated 6.5 Adrenal Gland Adrenal Gland 0002369 1046 1264 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993387 245819 0.971481 0.994121 0.81364 20280 1 76 0.00192176 129 0 5.42318e+07 0.0282031 615762 5.45525e+07 3.1838e+06 20293 2.70195e+07 0 0.157841 0.994121 0.808857 5.42318e+07 0.00253891 1.15881e+07 7.39572e+06 1.17613e+07 133 1.17088e+07 9.68545e+06 0.00223011 1.1681e+07 49.9406 0.0112875 0.994855 0 50.3711 GTEX-1PWST-2226-SM-EVR3G 2 B1 6 pieces, glomeruli present; moderate tubular autolysis 6.1 Kidney Kidney - Cortex 0001225 1046 1264 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986735 282045 0.97798 0.988442 0.788187 24240 1 76 0.00228857 276 0 9.74784e+07 0.0217038 724162 9.86182e+07 6.64382e+06 24275 4.8515e+07 0 0.189793 0.988442 0.779077 9.74784e+07 0.00344062 2.15732e+07 1.12997e+07 2.19231e+07 268 2.18427e+07 1.64415e+07 0.0028636 2.18145e+07 49.9676 0.00734308 0.990149 0 50.4022 GTEX-1PWST-2426-SM-EWRMP 3 B1 6 pieces; target mucosa up to ~0.2mm; glandular elements sloughed, lamina propria remains 6.2 Colon Colon - Transverse 0001157 1051 1259 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.980728 115035 0.972687 0.984394 0.788613 22814 1 76 0.00262682 122 0 5.37929e+07 0.0268026 174577 5.46457e+07 3.96366e+06 22835 2.67146e+07 0 0.184073 0.984394 0.776306 5.37929e+07 0.0035835 1.17253e+07 5.20529e+06 1.18798e+07 122 1.18758e+07 9.37811e+06 0.00309219 1.19126e+07 50.0774 0.00319471 0.988059 0 50.3272 GTEX-1PWST-2526-SM-E76QW 1 B1 6 pieces, confirmed target muscularis; nubbins of adherent fat up to ~1mm, prominent fibrosing mesothelial hyperplasia 6.3 Colon Colon - Sigmoid 0001159 1053 1257 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 EXCLUDE 0.99242 418138 0.976229 0.993934 0.769269 23019 1 76 0.00196248 176 0 8.60194e+07 0.0235441 334855 8.65444e+07 5.59893e+06 23047 4.28331e+07 0 0.206959 0.993934 0.764603 8.60194e+07 0.0027917 1.88656e+07 7.56687e+06 1.89849e+07 197 1.90149e+07 1.50342e+07 0.00237646 1.89631e+07 49.9317 0.00386917 0.995448 0 50.1575 GTEX-1PWST-2626-SM-E8VN8 1 B1 2 pieces, glandular elements with mild-moderately advanced autolysis 6.3 Prostate Prostate 0002367 1055 1255 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986196 475323 0.977926 0.987475 0.799167 22676 1 76 0.00176861 191 0 8.8157e+07 0.0217954 207835 8.92751e+07 4.87091e+06 22700 4.38874e+07 0 0.178759 0.987475 0.789158 8.8157e+07 0.0025358 1.93336e+07 7.2372e+06 1.94999e+07 205 1.94321e+07 1.71617e+07 0.00215171 1.95163e+07 50.1082 0.00232803 0.988755 0 50.2141 GTEX-1PWST-2926-SM-DKTQ4 1 B1 1 piece, adenohypophysis Pituitary Pituitary 0000007 1080 1230 BP-80675 DNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) EXCLUDE GTEX-1PWST-2926-SM-DLT2H 1 B1 1 piece, adenohypophysis Pituitary Pituitary 0000007 1080 1230 BP-80675 DNA Extraction from Paxgene-derived Lysate Plate Based 11/17/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1PWST-2926-SM-EAZ3G 1 B1 1 piece, adenohypophysis 7.6 Pituitary Pituitary 0000007 1080 1230 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991714 409730 0.968179 0.992276 0.761829 24927 1 76 0.0021 209 0 9.38795e+07 0.0313121 320315 9.46102e+07 7.74818e+06 24972 4.6777e+07 0 0.20635 0.992276 0.755945 9.38795e+07 0.00274902 2.05555e+07 9.96374e+06 2.06642e+07 237 2.0646e+07 1.53256e+07 0.00242432 2.063e+07 49.9806 0.00338563 0.992838 0 50.1318 GTEX-1PWST-3026-SM-EAZ3H 1 B1 4 pieces (fragmented); no abnormalities 7 Brain Brain - Cerebellum 0002037 1081 1229 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990796 485315 0.942778 0.991612 0.725577 24726 1 76 0.00231106 202 0 9.09558e+07 0.0569143 1.07272e+06 9.17252e+07 7.70562e+06 24767 4.5308e+07 0 0.217201 0.991612 0.719491 9.09558e+07 0.00309749 1.95461e+07 1.62393e+07 1.97175e+07 251 1.96949e+07 1.1057e+07 0.00270395 1.96413e+07 49.9319 0.0116949 0.992428 0 50.2183 GTEX-1PWST-3126-SM-EXUSE 1 B1 4 pieces (fragmented); no abnormalities 6.6 Brain Brain - Cortex 0001870 1083 1227 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991241 479235 0.964343 0.992116 0.818404 23237 1 76 0.00172519 148 0 6.00194e+07 0.0353881 2.07586e+06 6.04964e+07 1.55892e+06 23252 2.98999e+07 0 0.145939 0.992116 0.811951 6.00194e+07 0.00222919 1.31373e+07 8.4314e+06 1.33907e+07 171 1.33387e+07 7.37769e+06 0.00197697 1.32341e+07 49.8032 0.0343138 0.99299 0 50.4776 GTEX-1QAET-0006-SM-DLZQQ B1 7.5 Blood Whole Blood 0013756 326 BP-68854 RNA isolation_PAXgene Blood RNA (Manual) 11/09/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.959044 845890 0.962226 0.970592 0.79693 18335 1 76 0.00265032 105 0 8.40255e+07 0.0356231 114430 8.65715e+07 6.04263e+06 18339 4.13013e+07 0 0.165297 0.970592 0.773493 8.40255e+07 0.00607291 1.91485e+07 1.30417e+08 1.90858e+07 125 1.97e+07 2.21321e+07 0.00434126 1.95603e+07 49.822 0.0013218 0.982139 0 49.9179 GTEX-1QAET-0226-SM-EVR3T 1 B1 2 pieces; 10% stromal & vascular content in 1 piece 5.9 Thyroid Thyroid 0002046 355 1385 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987086 290298 0.963136 0.989129 0.73322 24900 1 76 0.00228605 209 0 9.79447e+07 0.036564 567801 9.90212e+07 6.78173e+06 24948 4.87369e+07 0 0.229916 0.989129 0.725248 9.79447e+07 0.00394501 2.12659e+07 1.04833e+07 2.14948e+07 228 2.148e+07 1.5393e+07 0.00311382 2.14723e+07 49.991 0.00573413 0.991172 0 50.2677 GTEX-1QAET-0326-SM-EVR3U 0 B1 6 pieces; well dissected; no dermal fat; single large hair complex in several pieces 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 357 1383 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988392 244328 0.9697 0.990231 0.786297 24563 1 76 0.00225638 283 0 9.93451e+07 0.0300628 624905 1.00325e+08 7.67969e+06 24599 4.94668e+07 0 0.183403 0.990231 0.778616 9.93451e+07 0.00333977 2.17958e+07 1.06292e+07 2.20272e+07 285 2.19882e+07 1.72069e+07 0.00279707 2.20025e+07 50.0162 0.0062288 0.992071 0 50.264 GTEX-1QAET-0426-SM-EXUSM 1 B1 2 pieces; pulmonary edema & early pneumonia; no sign of chronic disease 6.4 Lung Lung 0008952 359 1381 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.986956 349036 0.966129 0.987534 0.73961 23300 1 76 0.00217798 117 0 5.32828e+07 0.0331445 636059 5.39554e+07 1.8713e+06 23318 2.6514e+07 0 0.226519 0.987534 0.73039 5.32828e+07 0.00282408 1.17118e+07 6.56148e+06 1.18452e+07 130 1.18192e+07 7.34574e+06 0.00250084 1.17726e+07 49.9014 0.0117886 0.988112 0 50.283 GTEX-1QAET-0526-SM-EYYXF 1 B1 6 pieces; minimal fibrous intimal thickening; well dissected 6.5 Blood Vessel Artery - Aorta 0001496 365 1375 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.979857 171069 0.971295 0.982784 0.807962 22614 1 76 0.00229959 168 0 7.62793e+07 0.0283436 221607 7.76155e+07 3.30578e+06 22630 3.78943e+07 0 0.163333 0.982784 0.794053 7.62793e+07 0.00366847 1.64497e+07 6.64825e+06 1.66363e+07 186 1.66348e+07 1.31392e+07 0.00298199 1.66692e+07 50.0517 0.00285519 0.985711 0 50.2819 GTEX-1QAET-0826-SM-E76QR 1 B1 4 pieces; extensive replacement of intima & media by fibrous & atheromatous, focally calcified, material, but lumen patent; up to 1.6mm perivascular intrimmed fat 6.4 Blood Vessel Artery - Coronary 0001621 368 1372 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993311 270495 0.975569 0.994505 0.823953 23047 1 76 0.00188018 205 0 8.45985e+07 0.0241226 250786 8.50659e+07 5.63028e+06 23065 4.21427e+07 0 0.151616 0.994505 0.819425 8.45985e+07 0.00253339 1.83841e+07 7.84684e+06 1.84674e+07 207 1.84652e+07 1.69901e+07 0.0022064 1.84881e+07 50.031 0.00294814 0.995698 0 50.1131 GTEX-1QAET-0926-SM-E76QM 1 B1 6 pieces; well trimmed; 10% dermal fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 371 1369 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991293 529370 0.968534 0.99276 0.800315 24041 1 76 0.00194334 287 0 9.79528e+07 0.031186 802059 9.86671e+07 6.08816e+06 24069 4.87873e+07 0 0.16822 0.99276 0.794521 9.79528e+07 0.00282095 2.14305e+07 1.2282e+07 2.15168e+07 268 2.15759e+07 1.77568e+07 0.0023815 2.15081e+07 49.9213 0.00812894 0.994227 0 50.1004 GTEX-1QAET-1126-SM-E8VML 1 B1 2 pieces; 10% fibrous content in one 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 375 1365 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986367 782544 0.974121 0.987792 0.815893 24278 1 76 0.00176772 214 0 9.90315e+07 0.0256214 627834 1.00255e+08 4.87905e+06 24304 4.93108e+07 0 0.158229 0.987792 0.805932 9.90315e+07 0.00246174 2.1943e+07 9.61913e+06 2.21185e+07 244 2.20828e+07 1.89072e+07 0.00211423 2.21158e+07 50.0374 0.00626235 0.989217 0 50.1992 GTEX-1QAET-1226-SM-DTX9I 1 B1 2 partly fragmented pieces; 10% fibrous content in one 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 376 1364 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990127 828490 0.973698 0.992279 0.786986 24122 1 76 0.00205421 172 0 8.38334e+07 0.0259093 452382 8.44857e+07 4.06625e+06 24152 4.16658e+07 0 0.186712 0.992279 0.78091 8.38334e+07 0.00253766 1.85083e+07 8.70518e+06 1.84911e+07 199 1.87437e+07 1.44392e+07 0.00229541 1.84288e+07 49.5765 0.00535454 0.994432 0 49.9767 GTEX-1QAET-1326-SM-E9U64 2 B1 2 pieces; minimal fat content 5.9 Pancreas Pancreas 0001150 378 1362 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.99078 287636 0.97279 0.991626 0.807523 22059 1 76 0.00181762 129 0 8.05972e+07 0.027054 401930 8.12778e+07 2.95531e+06 22079 4.01836e+07 0 0.165267 0.991626 0.800761 8.05972e+07 0.00270084 1.81722e+07 1.41279e+07 1.82358e+07 144 1.82675e+07 1.99871e+07 0.00225885 1.82133e+07 49.9256 0.00494514 0.992471 0 50.0872 GTEX-1QAET-1426-SM-DKTRZ 1 B1 6 pieces; well dissected muscularis propria; several very small foci of skeletal muscle up to 0.05mmsq in 3 pieces [labeled], <1% area Esophagus Esophagus - Muscularis 0004648 383 1357 BP-79699 DNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1QAET-1426-SM-DLT2N 1 B1 6 pieces; well dissected muscularis propria; several very small foci of skeletal muscle up to 0.05mmsq in 3 pieces [labeled], <1% area Esophagus Esophagus - Muscularis 0004648 383 1357 BP-79699 DNA Extraction from Paxgene-derived Lysate Plate Based 10/21/2016 LCSET-10476 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QAET-1526-SM-EWRMW 1 B1 6 pieces; 3 pieces have 30% fatty stroma 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 388 1352 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.964293 165324 0.974909 0.967884 0.846621 23035 1 76 0.00243308 370 0 8.85665e+07 0.0249086 5.12902e+06 9.15053e+07 6.59859e+06 23054 4.40061e+07 0 0.128288 0.967884 0.819431 8.85665e+07 0.00332103 1.96234e+07 1.08531e+07 1.99845e+07 354 1.99236e+07 9.76448e+06 0.00286503 1.99701e+07 50.0583 0.0560516 0.971474 0 50.4558 GTEX-1QAET-1926-SM-DPRZG 1 B1 2 pieces; severely reduced mature spermatogenesis 6.3 Testis Testis 0000473 409 1331 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992862 349538 0.957737 0.993738 0.750577 28931 1 76 0.00207613 140 0 7.14516e+07 0.0419921 788530 7.19019e+07 3.98532e+06 28971 3.56019e+07 0 0.20716 0.993738 0.745877 7.14516e+07 0.00267448 1.55035e+07 8.11542e+06 1.56576e+07 157 1.56586e+07 1.13469e+07 0.00237504 1.55611e+07 49.8438 0.0109668 0.994614 0 50.2474 GTEX-1QAET-2026-SM-E9J3S 1 B1 2 partly fragmented pieces; minimal fat content 8.3 Muscle Muscle - Skeletal 0011907 410 1330 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.990878 689809 0.982049 0.991903 0.869228 20409 1 76 0.00157042 275 0 9.50407e+07 0.0176984 1.12637e+06 9.58165e+07 4.22171e+06 20419 4.73583e+07 0 0.112821 0.991903 0.86219 9.50407e+07 0.00230499 2.06436e+07 9.42414e+06 2.08449e+07 270 2.08271e+07 1.9047e+07 0.00193733 2.07489e+07 49.906 0.0117555 0.992927 0 50.2426 GTEX-1QAET-2326-SM-EXOJ1 2 B1 2 pieces; focally congested 5.6 Spleen Spleen 0002106 418 1322 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.977475 381692 0.960367 0.979106 0.754024 24222 1 76 0.00308587 207 0 9.24837e+07 0.0368334 933014 9.44573e+07 5.52715e+06 24258 4.58855e+07 0 0.206343 0.979106 0.738269 9.24837e+07 0.00429993 2.03547e+07 2.33834e+07 2.05233e+07 247 2.04979e+07 1.26006e+07 0.00369189 2.05316e+07 50.0411 0.00987762 0.980736 0 50.2062 GTEX-1QAET-2526-SM-E9J3R 1 B1 3 pieces; moderate intimal atherosclerosis; intimal and medial calcifications; well trimmed 7.2 Blood Vessel Artery - Tibial 0007610 427 1313 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985959 361539 0.975656 0.986852 0.816015 22942 1 76 0.00181171 210 0 9.48651e+07 0.0240383 464468 9.6129e+07 4.51641e+06 22969 4.72722e+07 0 0.159642 0.986852 0.805285 9.48651e+07 0.00272408 2.06981e+07 7.19941e+06 2.0862e+07 241 2.07747e+07 1.81397e+07 0.00226748 2.08725e+07 50.1174 0.00483171 0.987744 0 50.1972 GTEX-1QCLY-0002-SM-DE1IV B1 Blood Whole Blood 0013756 -229 BP-68840 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/09/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QCLY-0002-SM-DLIQA B1 Blood Whole Blood 0013756 -229 BP-68840 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/09/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QCLY-0005-SM-DLZQS B1 7.8 Blood Whole Blood 0013756 -229 BP-68854 RNA isolation_PAXgene Blood RNA (Manual) 11/09/2015 LCSET-10314,LCSET-10684 03/22/2017 TruSeq.v1 RNASEQ 0.973296 1.22958e+06 0.966982 0.977997 0.805053 19594 1 76 0.00284786 270 0 1.47652e+08 0.0311213 192412 1.50974e+08 7.08581e+06 19604 7.30615e+07 0 0.161929 0.977997 0.787339 1.47652e+08 0.00397766 3.41368e+07 1.91805e+08 3.40913e+07 298 3.44714e+07 3.88922e+07 0.00341005 3.44788e+07 50.0054 0.00127447 0.982697 0 49.9666 GTEX-1QCLY-0126-SM-DPRZV 1 B1 2 pieces, no abnormalities 6.1 Spleen Spleen 0002106 456 1277 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.989427 264603 0.95774 0.990367 0.755959 23608 1 76 0.00318754 124 0 6.02426e+07 0.0396334 289773 6.08286e+07 3.72114e+06 23638 2.98996e+07 0 0.201781 0.990367 0.748677 6.02426e+07 0.00421969 1.32498e+07 1.19813e+07 1.33571e+07 134 1.33343e+07 9.00837e+06 0.00370313 1.33297e+07 49.9913 0.00476376 0.991308 0 50.2017 GTEX-1QCLY-0226-SM-EWRNH 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~35 microns 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 842 891 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985795 388953 0.965368 0.988932 0.794385 24165 1 76 0.00260657 226 0 9.0049e+07 0.0344111 525648 9.10569e+07 6.03048e+06 24194 4.47918e+07 0 0.170983 0.988932 0.785592 9.0049e+07 0.00347647 1.96344e+07 1.37113e+07 1.98319e+07 226 1.98813e+07 1.53652e+07 0.00302998 1.98416e+07 49.95 0.00577274 0.992068 0 50.2502 GTEX-1QCLY-0326-SM-E8VOG 0 B1 6 pieces, moderate dermal fat, rep. delineated; squamous epithelium is ~40 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 848 885 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.985207 565402 0.969834 0.986487 0.791998 23771 1 76 0.00193982 248 0 9.17688e+07 0.0298981 353888 9.30258e+07 4.51928e+06 23798 4.57118e+07 0 0.177836 0.986487 0.781296 9.17688e+07 0.00260856 1.98533e+07 1.00855e+07 1.99776e+07 231 1.99475e+07 1.56328e+07 0.00227375 1.99953e+07 50.0598 0.00380419 0.987768 0 50.1561 GTEX-1QCLY-0426-SM-E8VOH 0 B1 2 pieces, ~10% interstitial/adherent fat/vascular elements, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 849 884 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.990791 1.01174e+06 0.983821 0.993124 0.887007 21366 1 76 0.00212184 292 0 1.51446e+08 0.0158431 831000 1.52495e+08 1.19742e+07 21383 7.53449e+07 0 0.0968144 0.993124 0.880908 1.51446e+08 0.00322936 3.33654e+07 1.44772e+07 3.3466e+07 314 3.37906e+07 3.67432e+07 0.0026743 3.33279e+07 49.6554 0.00544936 0.995457 0 50.0752 GTEX-1QCLY-0526-SM-EAZ47 0 B1 2 pieces, ~5-10% adherent fascia/peripheral nerve elements, rep delineated. 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 852 881 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.9862 186835 0.973619 0.986623 0.829088 23500 1 76 0.00222516 278 0 9.91526e+07 0.0260294 764798 1.00497e+08 7.88194e+06 23535 4.94259e+07 0 0.144531 0.986623 0.817997 9.91526e+07 0.00283514 2.16049e+07 9.09351e+06 2.18159e+07 328 2.17015e+07 1.72531e+07 0.00253002 2.17656e+07 50.0738 0.00761016 0.987046 0 50.243 GTEX-1QCLY-0626-SM-EAZ3Y 0 B1 2 pieces, no significant atherosis or adherent fat 6.1 Blood Vessel Artery - Tibial 0007610 855 878 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988928 352687 0.973409 0.989533 0.845272 22247 1 76 0.00209735 281 0 9.96014e+07 0.0261521 327319 1.00655e+08 8.41615e+06 22268 4.96383e+07 0 0.128137 0.989533 0.836425 9.96014e+07 0.00286184 2.12565e+07 7.6659e+06 2.14437e+07 284 2.13403e+07 1.98919e+07 0.00247936 2.14252e+07 50.0992 0.00325189 0.990137 0 50.2191 GTEX-1QCLY-0726-SM-DTXDX 0 B1 2 pieces, no significant adherent fat 6.3 Nerve Nerve - Tibial 0001323 857 876 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993506 423143 0.96262 0.994262 0.739904 24524 1 76 0.00231292 183 0 8.5864e+07 0.0370835 303949 8.63596e+07 4.62611e+06 24568 4.27789e+07 0 0.222716 0.994262 0.735658 8.5864e+07 0.00258059 1.87822e+07 7.19712e+06 1.88727e+07 201 1.89068e+07 1.28406e+07 0.00244665 1.88104e+07 49.8722 0.00351958 0.995017 0 50.1202 GTEX-1QCLY-0826-SM-DTX8A 1 B1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 858 875 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990592 615079 0.962018 0.992432 0.752629 24033 1 76 0.00220178 147 0 7.18366e+07 0.0377202 289240 7.23845e+07 3.23782e+06 24068 3.57215e+07 0 0.20939 0.992432 0.746932 7.18366e+07 0.00257376 1.55912e+07 7.78926e+06 1.56467e+07 167 1.57991e+07 1.02375e+07 0.00238742 1.55597e+07 49.6182 0.00399588 0.994271 0 50.0888 GTEX-1QCLY-1026-SM-EWRNI 1 B1 2 pieces, trace edema, pronounced ataletctasis 6.9 Lung Lung 0008952 862 871 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989885 204470 0.968622 0.992247 0.790494 24789 1 76 0.00272526 209 0 7.93516e+07 0.0309865 341509 7.99716e+07 5.12655e+06 24827 3.94946e+07 0 0.178129 0.992247 0.784365 7.93516e+07 0.00314538 1.74118e+07 6.85749e+06 1.7638e+07 219 1.76306e+07 1.32121e+07 0.00292991 1.7577e+07 49.9238 0.00427038 0.994608 0 50.3227 GTEX-1QCLY-1126-SM-EAZ4J 2 B1 6 pieces, mucosa up to ~1mm, moderately advanced autolysis 5.6 Stomach Stomach 0000945 865 868 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.9854 248820 0.973949 0.986285 0.815811 23901 1 76 0.00258776 297 0 9.00734e+07 0.0257039 958940 9.13259e+07 7.2182e+06 23929 4.4872e+07 0 0.158138 0.986285 0.804622 9.00734e+07 0.0035564 2.01599e+07 2.84981e+07 2.03676e+07 264 2.02885e+07 1.38503e+07 0.00307165 2.03122e+07 50.0292 0.0105002 0.98717 0 50.2562 GTEX-1QCLY-1226-SM-EVYC3 1 B1 2 pieces, trace mesothelium fascia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 867 866 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990793 350785 0.973976 0.991403 0.8169 22836 1 76 0.00211478 179 0 7.94251e+07 0.0257517 319928 8.01138e+07 3.5336e+06 22860 3.95935e+07 0 0.157076 0.991403 0.809877 7.94251e+07 0.00318898 1.74382e+07 7.96188e+06 1.76657e+07 198 1.76045e+07 1.39902e+07 0.00265155 1.75508e+07 49.9237 0.00399342 0.992013 0 50.3241 GTEX-1QCLY-1426-SM-E76P8 1 B1 6 pieces, confirmed target muscularis; few adherent nubbins of serosal fat, delineated, ~1-2mm 6.6 Esophagus Esophagus - Muscularis 0004648 873 860 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993147 554058 0.974252 0.994597 0.827194 22693 1 76 0.00206788 216 0 9.00205e+07 0.0254677 556639 9.05095e+07 5.93257e+06 22713 4.48181e+07 0 0.147058 0.994597 0.822724 9.00205e+07 0.00303789 1.93403e+07 7.5452e+06 1.94686e+07 238 1.9545e+07 1.56956e+07 0.00255218 1.93801e+07 49.7881 0.00615006 0.996048 0 50.1654 GTEX-1QCLY-1526-SM-DPRXX 1 B1 6 pieces, squamous mucosa is ~0.5mm, 20-50% thickness, submucosal mucus glands present, rep delineated. 9.1 Esophagus Esophagus - Mucosa 0006920 876 857 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.991984 366945 0.967791 0.993284 0.773765 22482 1 76 0.00284125 145 0 6.84596e+07 0.0318736 306870 6.89225e+07 3.3597e+06 22507 3.40805e+07 0 0.194027 0.993284 0.768568 6.84596e+07 0.00316492 1.52171e+07 8.90537e+06 1.53128e+07 147 1.53277e+07 1.2361e+07 0.00300287 1.52871e+07 49.9338 0.00445239 0.994584 0 50.1567 GTEX-1QCLY-1626-SM-DTXDW 0 B1 2 pieces, gynecomastoid stromal and ductal (rep delineated) hyperplasia 7.7 Breast Breast - Mammary Tissue 0008367 878 855 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994232 474059 0.963984 0.994996 0.751518 25102 1 76 0.00222591 172 0 8.24077e+07 0.0357067 241105 8.28222e+07 4.24365e+06 25145 4.10626e+07 0 0.212465 0.994996 0.747757 8.24077e+07 0.00256071 1.80103e+07 7.35944e+06 1.81202e+07 184 1.81688e+07 1.37517e+07 0.00239318 1.80221e+07 49.7974 0.00291111 0.995759 0 50.1522 GTEX-1QCLY-1726-SM-DPRXY 2 B1 6 pieces, target mucosa ~0.3mm, moderate-severe advanced autolysis 7.6 Colon Colon - Transverse 0001157 880 853 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993469 208122 0.971658 0.994306 0.79798 23471 1 76 0.00252192 139 0 6.70305e+07 0.0274865 671464 6.74144e+07 3.82928e+06 23504 3.33831e+07 0 0.173677 0.994306 0.793436 6.70305e+07 0.00307062 1.48623e+07 7.89182e+06 1.50308e+07 161 1.50011e+07 9.88667e+06 0.00279604 1.49383e+07 49.895 0.00996025 0.995143 0 50.2819 GTEX-1QCLY-1826-SM-DTX89 1 B1 2 pieces, hyperplastic glandular pattern 5.7 Prostate Prostate 0002367 882 851 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990061 440252 0.966234 0.99192 0.776385 25760 1 76 0.00219116 377 0 1.06179e+08 0.0334552 591427 1.07043e+08 5.20856e+06 25800 5.28172e+07 0 0.189848 0.99192 0.770112 1.06179e+08 0.00261512 2.32383e+07 1.07236e+07 2.34926e+07 339 2.36116e+07 1.67917e+07 0.00240275 2.33072e+07 49.6756 0.00552511 0.993779 0 50.2721 GTEX-1QCLY-2026-SM-EVR4C 1 B1 6 pieces, confirmed target muscularis; adherent serosal fat up to ~2mm 5.6 Colon Colon - Sigmoid 0001159 887 846 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987034 120957 0.967994 0.988686 0.762929 22954 1 76 0.0024748 140 0 6.59826e+07 0.0318171 712241 6.67376e+07 4.85047e+06 22985 3.28554e+07 0 0.205065 0.988686 0.754297 6.59826e+07 0.00351777 1.4339e+07 6.48269e+06 1.44658e+07 154 1.44113e+07 8.55023e+06 0.00299541 1.44877e+07 50.1322 0.0106723 0.990338 0 50.2202 GTEX-1QCLZ-0001-SM-DLIQ3 B1 Blood Whole Blood 0013756 -139 BP-68840 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/09/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QCLZ-0003-SM-DHP2G B1 Blood Whole Blood 0013756 -139 BP-68840 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/09/2015 LCSET-10344 12/18/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QCLZ-0006-SM-CY8GW B1 7.8 Blood Whole Blood 0013756 -139 BP-68854 RNA isolation_PAXgene Blood RNA (Manual) 11/09/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.988712 886540 0.959667 0.991027 0.826671 18325 1 76 0.00500031 135 0 7.79195e+07 0.0398921 573754 7.8625e+07 9.57423e+06 18334 3.8747e+07 0 0.132996 0.991027 0.819253 7.79195e+07 0.00822014 1.69635e+07 3.09813e+07 1.70821e+07 149 1.71506e+07 1.61225e+07 0.00660647 1.7088e+07 49.9085 0.00729735 0.993342 0 50.1741 GTEX-1QCLZ-0326-SM-DTXG2 1 B1 2 pieces; ~25% and 20% internal/external fat (outlined) 7.6 Muscle Muscle - Skeletal 0011907 255 554 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994602 663403 0.984226 0.9956 0.880875 19831 1 76 0.00164727 274 0 8.72808e+07 0.0155511 1.00306e+06 8.76665e+07 4.39275e+06 19846 4.34933e+07 0 0.103351 0.9956 0.876999 8.72808e+07 0.00214959 1.92935e+07 9.1016e+06 1.94671e+07 259 1.95392e+07 1.82497e+07 0.00189818 1.9296e+07 49.6869 0.0114418 0.996598 0 50.224 GTEX-1QCLZ-0526-SM-E8VNO 1 B1 2 pieces; early atherosis; lumina open 8.3 Blood Vessel Artery - Tibial 0007610 258 551 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.990402 403925 0.975486 0.991451 0.818053 21544 1 76 0.00165827 209 0 8.67073e+07 0.0241047 337620 8.7455e+07 4.08991e+06 21567 4.3197e+07 0 0.157433 0.991451 0.81106 8.67073e+07 0.00212869 1.87625e+07 5.63079e+06 1.89145e+07 226 1.88907e+07 1.64306e+07 0.00189323 1.88743e+07 49.9784 0.0038605 0.992499 0 50.2017 GTEX-1QCLZ-0626-SM-E6CR2 1 B1 2 pieces; one shows diffuse interstitial lymphoid infiltration with germinal centers; the second shows interstitial fibrosis with micro nodularity, variable size of follicles and interstitial lymphoid infiltrate; Hashimoto disease (lymphocytic thyroiditis) 6.5 Thyroid Thyroid 0002046 265 544 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.989642 474965 0.962636 0.991873 0.727042 25067 1 76 0.00260763 143 0 7.66028e+07 0.036599 326882 7.72304e+07 1.39311e+07 25113 3.80757e+07 0 0.235594 0.991873 0.721133 7.66028e+07 0.00357644 1.68429e+07 9.72118e+06 1.67006e+07 162 1.67731e+07 1.13975e+07 0.00309094 1.69314e+07 50.2348 0.00423255 0.994105 0 49.7879 GTEX-1QCLZ-0826-SM-EWRNA 1 B1 2 pieces; early atherosis and up to 1.6mm attached adventitia and fat 7.2 Blood Vessel Artery - Coronary 0001621 276 533 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988103 379344 0.974771 0.990901 0.828116 23716 1 76 0.00231438 278 0 1.08565e+08 0.0248419 433083 1.09562e+08 7.83638e+06 23743 5.40159e+07 0 0.146655 0.990901 0.820581 1.08565e+08 0.00293179 2.32212e+07 8.04383e+06 2.35265e+07 315 2.35432e+07 2.06815e+07 0.00261499 2.34687e+07 49.9208 0.00395286 0.9937 0 50.3265 GTEX-1QCLZ-0926-SM-E6CQZ 1 B1 2 pieces; subtle interstitial/perivascular connective tissue accentuation; well trimmed 7.6 Heart Heart - Left Ventricle 0006566 278 531 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992493 396048 0.983397 0.994702 0.865932 20373 1 76 0.00185162 196 0 7.88453e+07 0.0163599 1.87193e+06 7.92652e+07 1.30653e+07 20384 3.9238e+07 0 0.117465 0.994702 0.861345 7.88453e+07 0.00301085 1.75023e+07 1.19635e+07 1.74336e+07 239 1.74531e+07 1.34238e+07 0.00242995 1.75903e+07 50.1958 0.023616 0.996912 0 49.9017 GTEX-1QCLZ-1026-SM-E6CR1 1 B1 2 pieces; congestion 5.5 Spleen Spleen 0002106 281 528 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990392 242271 0.96144 0.992201 0.777964 24782 1 76 0.00255736 206 0 8.91731e+07 0.0377275 820863 8.9874e+07 1.53604e+07 24814 4.43476e+07 0 0.183477 0.992201 0.771896 8.91731e+07 0.00369385 1.95577e+07 1.21612e+07 1.95577e+07 244 1.95313e+07 1.25899e+07 0.00312457 1.97352e+07 50.2596 0.00913348 0.99401 0 50 GTEX-1QCLZ-1126-SM-EWRNB 1 B1 2 pieces; one well trimmed fibromuscular tissue and other with ~15% internal/external fat 7.9 Heart Heart - Atrial Appendage 0006631 282 527 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987363 559393 0.97766 0.991465 0.845502 23119 1 76 0.00206833 373 0 1.30727e+08 0.0220587 2.64722e+06 1.31852e+08 9.15463e+06 23144 6.49929e+07 0 0.132158 0.991465 0.838286 1.30727e+08 0.00307724 2.83195e+07 2.51524e+07 2.85343e+07 346 2.84942e+07 2.02529e+07 0.00255891 2.87863e+07 50.255 0.0200771 0.995566 0 50.1889 GTEX-1QCLZ-1226-SM-EAZ49 1 B1 2 pieces; diffuse fatty degeneration (large and small fat droplets);one with bile ducts surrounded by dense fibrous tissue (outlined) and other covered by capsule at two sides (arrows) 8.1 Liver Liver 0001114 288 521 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993466 607887 0.982081 0.994327 0.856598 22545 1 76 0.00188963 375 0 1.47993e+08 0.0176737 1.34551e+06 1.48837e+08 1.15568e+07 22572 7.37976e+07 0 0.125483 0.994327 0.851739 1.47993e+08 0.00280744 3.15006e+07 2.74686e+07 3.16972e+07 343 3.16921e+07 3.31863e+07 0.00234814 3.1618e+07 49.9415 0.00904015 0.995188 0 50.1555 GTEX-1QCLZ-1526-SM-EXUSS 1 B1 6 pieces; well trimmed target muscularis 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 303 506 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.990367 289389 0.974497 0.9907 0.823809 21682 1 76 0.00155561 141 0 6.42197e+07 0.0251857 383124 6.48226e+07 2.49705e+06 21701 3.19956e+07 0 0.150688 0.9907 0.816147 6.42197e+07 0.00209011 1.38735e+07 4.70344e+06 1.40203e+07 150 1.39544e+07 1.2479e+07 0.00182277 1.39625e+07 50.0145 0.00591035 0.991032 0 50.2632 GTEX-1QCLZ-1626-SM-E9U5R 1 B1 6 pieces; stratified squamous epithelium up to 0.27 mm 8.8 Esophagus Esophagus - Mucosa 0006920 306 503 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992596 267915 0.978946 0.993369 0.834706 22313 1 76 0.001776 217 0 8.67264e+07 0.0207392 341864 8.73053e+07 3.02e+06 22333 4.32523e+07 0 0.14424 0.993369 0.829171 8.67264e+07 0.00261205 1.96151e+07 1.14081e+07 1.96982e+07 227 1.97076e+07 1.88258e+07 0.0021937 1.96695e+07 49.9515 0.00391573 0.994142 0 50.1057 GTEX-1QCLZ-1726-SM-DTX7Q 1 B1 6 pieces; target muscularis and fibrovascular tissue of submucosa (arrows) 6.3 Esophagus Esophagus - Muscularis 0004648 311 498 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990124 751520 0.977441 0.992233 0.827771 22794 1 76 0.00173891 176 0 7.93295e+07 0.0222522 569333 7.99505e+07 3.4468e+06 22817 3.94675e+07 0 0.14967 0.992233 0.821341 7.93295e+07 0.00219732 1.72778e+07 5.84069e+06 1.73413e+07 197 1.74543e+07 1.48058e+07 0.00196763 1.7318e+07 49.804 0.00712107 0.994341 0 50.0916 GTEX-1QCLZ-1826-SM-DPRXP 1 B1 6 pieces; mild autolysis of mucosa and submucosa 5.9 Stomach Stomach 0000945 313 496 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.987022 357070 0.983073 0.988626 0.853373 22172 1 76 0.0023273 270 0 7.50849e+07 0.0164562 799050 7.59488e+07 3.73451e+06 22191 3.73399e+07 0 0.1297 0.988626 0.843666 7.50849e+07 0.00250512 1.72605e+07 7.02211e+07 1.75383e+07 200 1.75449e+07 2.03275e+07 0.00241607 1.73715e+07 49.7517 0.0105209 0.990229 0 50.3992 GTEX-1QCLZ-1926-SM-E6CR3 1 B1 6 pieces; mild to moderate autolysis of mucosa; outlined attached serosa and fat 6.3 Colon Colon - Transverse 0001157 314 495 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.988011 401607 0.968899 0.989891 0.818549 24370 1 76 0.00350225 207 0 8.61989e+07 0.0267091 648422 8.70791e+07 1.37498e+07 24401 4.27005e+07 0 0.150349 0.989891 0.810275 8.61989e+07 0.00462256 1.91618e+07 1.42866e+07 1.91682e+07 219 1.92219e+07 1.35183e+07 0.00406134 1.9252e+07 50.039 0.00744635 0.991771 0 50.0083 GTEX-1QCLZ-2026-SM-EAZ4A 1 B1 6 pieces; preserved target muscularis and not target moderaterly to severely autolyzed mucosa (outlined) 5.7 Colon Colon - Sigmoid 0001159 326 483 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987473 388450 0.969293 0.988157 0.769677 23894 1 76 0.00203192 275 0 9.86952e+07 0.0304976 667840 9.98781e+07 7.73765e+06 23933 4.91739e+07 0 0.199616 0.988157 0.760561 9.86952e+07 0.00292057 2.13491e+07 8.4015e+06 2.15745e+07 286 2.14601e+07 1.41666e+07 0.00247593 2.15328e+07 50.0846 0.00668655 0.98884 0 50.2626 GTEX-1QCLZ-2126-SM-EWRNC 2 B1 6 pieces; autolyzed mucosa; at least 50% of tissue are residual target lymphoid aggregates (outlined) 7 Small Intestine Small Intestine - Terminal Ileum 0001211 327 482 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98719 366746 0.974336 0.990329 0.815923 24382 1 76 0.00233183 275 0 9.74777e+07 0.0254101 671381 9.84296e+07 7.00866e+06 24418 4.84783e+07 0 0.158413 0.990329 0.808032 9.74777e+07 0.00309663 2.12007e+07 8.08759e+06 2.14933e+07 313 2.15145e+07 1.58153e+07 0.00270407 2.14475e+07 49.922 0.00682092 0.993467 0 50.3427 GTEX-1QCLZ-2226-SM-DTX7R 1 B1 6 pieces; fibromuscular tissue with vessels, nerves and fat and focal trace of residual epithelium (arrow) 6 Vagina Vagina 0000996 329 480 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991527 727883 0.971587 0.993415 0.769859 24563 1 76 0.00193639 197 0 8.90632e+07 0.0280813 476276 8.96536e+07 3.97767e+06 24599 4.43082e+07 0 0.201728 0.993415 0.764789 8.90632e+07 0.00227251 1.95378e+07 8.00092e+06 1.95658e+07 207 1.97547e+07 1.56021e+07 0.00210413 1.95089e+07 49.6871 0.0053124 0.995302 0 50.0357 GTEX-1QCLZ-2326-SM-DTXDO 1 B1 2 pieces; 60% mature adipose tissue and 40% fibrovascular tissue and nerves; no definite ducts or lobules identified 5.7 Breast Breast - Mammary Tissue 0008367 334 475 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994234 602166 0.974278 0.995148 0.808013 23952 1 76 0.00197313 195 0 8.22773e+07 0.0254511 655279 8.26785e+07 4.44712e+06 23974 4.09855e+07 0 0.166265 0.995148 0.804092 8.22773e+07 0.00230081 1.81273e+07 7.13181e+06 1.82209e+07 205 1.8308e+07 1.45414e+07 0.00213682 1.8114e+07 49.7337 0.00792563 0.996061 0 50.1287 GTEX-1QCLZ-2426-SM-EVYBW 1 B1 6 pieces; hair bearing skin and internal/external fat up to 40% 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 333 476 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991787 323671 0.971038 0.992324 0.782137 24973 1 76 0.00191081 226 0 9.00868e+07 0.0287382 554206 9.07837e+07 3.93813e+06 25009 4.49218e+07 0 0.188901 0.992324 0.776134 9.00868e+07 0.00277959 1.97898e+07 8.08167e+06 1.99929e+07 237 1.99305e+07 1.53263e+07 0.00234496 1.99009e+07 49.9629 0.00610469 0.992861 0 50.2552 GTEX-1QCLZ-2526-SM-EXUST 1 B1 2 pieces; 20% and 60% of glandular component(outlined) surrounded by fibroadipose and vascular tissue; ductal elements arrowed 9.3 Salivary Gland Minor Salivary Gland 0006330 336 473 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.987331 143034 0.970787 0.987622 0.798089 22570 1 76 0.001926 113 0 4.82475e+07 0.0284619 296213 4.88522e+07 2.08519e+06 22581 2.40279e+07 0 0.172698 0.987622 0.78821 4.82475e+07 0.00238451 1.07191e+07 5.0164e+06 1.07978e+07 111 1.07664e+07 8.96132e+06 0.00215519 1.07625e+07 49.991 0.00606345 0.987913 0 50.1828 GTEX-1QEPI-0001-SM-DE1JM B1 Blood Whole Blood 0013756 607 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QEPI-0001-SM-DLIPF B1 Blood Whole Blood 0013756 607 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QEPI-0006-SM-CY8GY B1 7.2 Blood Whole Blood 0013756 607 BP-68986 RNA isolation_PAXgene Blood RNA (Manual) 11/13/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.965336 396691 0.98335 0.967075 0.796216 19435 1 76 0.00460133 120 0 1.03476e+08 0.0150715 233073 1.06999e+08 1.26082e+07 19445 5.14215e+07 0 0.187134 0.967075 0.770001 1.03476e+08 0.00753118 2.42845e+07 1.46281e+08 2.44832e+07 149 2.44799e+07 2.71878e+07 0.00606362 2.44726e+07 49.9926 0.00217828 0.968814 0 50.2037 GTEX-1QEPI-0126-SM-EWRMQ 1 B1 6 pieces; well trimmed; 10% dermal fat 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 660 1262 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988915 263304 0.969508 0.991488 0.784356 25202 1 76 0.00248495 238 0 8.73165e+07 0.0302126 245678 8.80661e+07 5.88051e+06 25235 4.34572e+07 0 0.185151 0.991488 0.77768 8.73165e+07 0.00297091 1.88219e+07 8.34973e+06 1.89887e+07 225 1.9041e+07 1.55577e+07 0.00272161 1.89659e+07 49.9013 0.0027897 0.994061 0 50.2206 GTEX-1QEPI-0226-SM-EWRMR 1 B1 2 pieces; 1 with 25% fibrous content; other with 30% fascia, 30% fibrous stroma; calcium deposits in both 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 663 1259 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988731 276501 0.971744 0.991169 0.79728 24783 1 76 0.00258577 213 0 9.29592e+07 0.0279576 343874 9.37874e+07 6.5272e+06 24819 4.62633e+07 0 0.174464 0.991169 0.790239 9.29592e+07 0.00311754 2.03396e+07 8.26948e+06 2.05911e+07 250 2.06112e+07 1.66832e+07 0.00284478 2.05203e+07 49.8894 0.00366653 0.993607 0 50.3072 GTEX-1QEPI-0326-SM-EVYBB 1 B1 2 pieces; 20% external fat 6.7 Nerve Nerve - Tibial 0001323 665 1257 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.982094 199563 0.972018 0.982507 0.81408 23668 1 76 0.00202492 216 0 8.6647e+07 0.027672 367568 8.81897e+07 4.29701e+06 23702 4.31842e+07 0 0.157938 0.982507 0.79984 8.6647e+07 0.00296663 1.89892e+07 8.70381e+06 1.92198e+07 217 1.91012e+07 1.63481e+07 0.00249557 1.91516e+07 50.0658 0.00416792 0.98292 0 50.3019 GTEX-1QEPI-0526-SM-E76QF 1 B1 2 pieces; minimal fatty content 7.9 Muscle Muscle - Skeletal 0011907 669 1253 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993604 706661 0.981285 0.995056 0.874204 22853 1 76 0.00163834 375 0 1.26546e+08 0.0184726 1.4034e+06 1.27174e+08 7.91643e+06 22874 6.30455e+07 0 0.107081 0.995056 0.869881 1.26546e+08 0.00246946 2.74479e+07 1.2645e+07 2.77401e+07 340 2.78582e+07 2.75015e+07 0.00205329 2.74863e+07 49.664 0.0110352 0.996508 0 50.2647 GTEX-1QEPI-0626-SM-E76QE 1 B1 2 pieces; well dissected; focal atrophy & lymphoid infiltrate; smaller piece has 25% fat content 7.8 Salivary Gland Minor Salivary Gland 0006330 678 1244 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99181 596692 0.974919 0.99338 0.801382 25706 1 76 0.00210124 397 0 1.14585e+08 0.0242862 657604 1.15348e+08 7.15565e+06 25754 5.70348e+07 0 0.173536 0.99338 0.796078 1.14585e+08 0.00287759 2.57513e+07 1.77257e+07 2.59175e+07 342 2.60616e+07 2.14697e+07 0.0024888 2.57763e+07 49.7248 0.00570102 0.994951 0 50.1609 GTEX-1QEPI-0726-SM-E76QG 2 B1 2 pieces; 1 piece has 10% fibrous content 6.6 Thyroid Thyroid 0002046 684 1238 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992058 342447 0.971948 0.993513 0.754961 24714 1 76 0.00202043 169 0 8.37914e+07 0.0277222 417138 8.43385e+07 5.45145e+06 24759 4.17219e+07 0 0.216988 0.993513 0.750063 8.37914e+07 0.00296997 1.84827e+07 7.41886e+06 1.85194e+07 187 1.86025e+07 1.40413e+07 0.0024945 1.85157e+07 49.883 0.004946 0.994968 0 50.0496 GTEX-1QEPI-0826-SM-DTX9B 1 B1 2 pieces; moderate vascular congestion, alveolar hemorrhage and edema 6.2 Lung Lung 0008952 690 1232 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989952 550911 0.9752 0.991619 0.742054 23110 1 76 0.00227849 131 0 6.80616e+07 0.0244667 292619 6.86368e+07 3.30217e+06 23140 3.38233e+07 0 0.233145 0.991619 0.735835 6.80616e+07 0.00270091 1.51228e+07 7.01311e+06 1.51271e+07 151 1.53183e+07 1.04421e+07 0.00248934 1.50396e+07 49.541 0.0042633 0.993287 0 50.0071 GTEX-1QEPI-0926-SM-DTXF3 1 B1 2 pieces; fibrofatty tissue without mammary ducts 6.8 Breast Breast - Mammary Tissue 0008367 702 1220 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992479 666749 0.977245 0.993224 0.807197 24619 1 76 0.00219098 212 0 9.44891e+07 0.0223921 538440 9.51338e+07 4.75686e+06 24650 4.70499e+07 0 0.170048 0.993224 0.801727 9.44891e+07 0.00260195 2.09312e+07 8.77487e+06 2.1003e+07 232 2.10988e+07 1.74425e+07 0.00239631 2.09062e+07 49.7707 0.00565982 0.993969 0 50.0856 GTEX-1QEPI-1126-SM-E8VN7 1 B1 3 pieces; 1 has 40% fibrofatty content 6.2 Heart Heart - Atrial Appendage 0006631 719 1203 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.985442 483433 0.974994 0.986609 0.778686 23669 1 76 0.00172314 205 0 9.781e+07 0.0246758 945492 9.91375e+07 5.04334e+06 23706 4.87172e+07 0 0.196309 0.986609 0.768258 9.781e+07 0.00232533 2.10987e+07 7.70452e+06 2.12246e+07 239 2.12031e+07 1.71081e+07 0.00202388 2.12279e+07 50.0292 0.00953718 0.987777 0 50.1487 GTEX-1QEPI-1626-SM-EAZ3I 2 B1 2 pieces; fat comprises 30 & 50%; some parts are severely autolyzed 6.5 Pancreas Pancreas 0001150 727 1195 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989518 338982 0.984029 0.990234 0.860674 21049 1 76 0.00236205 106 0 9.19057e+07 0.0156383 501736 9.28122e+07 7.44824e+06 21066 4.57909e+07 0 0.123354 0.990234 0.852269 9.19057e+07 0.00324695 2.1361e+07 3.35469e+07 2.16177e+07 126 2.14798e+07 3.00784e+07 0.00280418 2.15725e+07 50.1078 0.00540593 0.99095 0 50.2986 GTEX-1QEPI-1826-SM-EAZ3J 1 B1 6 pieces; moderate sloughing of squamous epithelium; well dissected 6.2 Esophagus Esophagus - Mucosa 0006920 792 1130 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.971667 275997 0.971478 0.972397 0.814413 22217 1 76 0.00228507 268 0 8.47333e+07 0.0283418 1.65974e+06 8.71386e+07 7.87774e+06 22237 4.22348e+07 0 0.157064 0.972397 0.791933 8.47333e+07 0.00311335 1.89451e+07 1.3296e+07 1.91946e+07 269 1.9088e+07 1.08365e+07 0.0026989 1.91215e+07 50.0438 0.0190471 0.973126 0 50.3271 GTEX-1QEPI-2226-SM-E8VN6 1 B1 2 pieces; 1% fibrous content 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 747 1175 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.974486 767076 0.962618 0.975738 0.718504 23457 1 76 0.00214445 203 0 9.4266e+07 0.0370268 1.27959e+06 9.661e+07 5.21301e+06 23493 4.69032e+07 0 0.244114 0.975738 0.701071 9.4266e+07 0.0027928 2.0627e+07 2.41479e+07 2.08919e+07 221 2.08462e+07 1.31767e+07 0.00246821 2.08069e+07 49.9528 0.0132449 0.97699 0 50.3191 GTEX-1QEPI-2626-SM-DTXF4 1 B1 6 pieces; up to 60% subcutaneous fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 759 1163 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994285 534829 0.973119 0.99505 0.780404 24514 1 76 0.00212816 218 0 8.87e+07 0.0266318 362036 8.91412e+07 4.67742e+06 24555 4.41946e+07 0 0.192715 0.99505 0.776541 8.87e+07 0.00238558 1.93877e+07 8.35666e+06 1.94426e+07 208 1.95211e+07 1.5869e+07 0.00225677 1.93743e+07 49.8114 0.00406137 0.995815 0 50.0707 GTEX-1QEPI-2726-SM-DPRZ6 1 B1 2 pieces; 1 piece has 50% corpora albicantia 6 Ovary Ovary 0000992 763 1159 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993659 181280 0.95833 0.994232 0.673735 22072 1 76 0.00217699 112 0 4.95398e+07 0.0414757 201289 4.98272e+07 3.08315e+06 22105 2.46768e+07 0 0.284594 0.994232 0.669849 4.95398e+07 0.00261339 1.07765e+07 7.48206e+06 1.08854e+07 115 1.08335e+07 6.33121e+06 0.00239507 1.08626e+07 50.067 0.00403974 0.994804 0 50.2513 GTEX-1QEPI-2926-SM-EXOIV 1 B1 1 piece; anterior pituitary (not brain cortex) 6 Pituitary Pituitary 0000007 1043 879 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.987279 346026 0.964733 0.989048 0.781619 25455 1 76 0.00213629 202 0 8.76598e+07 0.0350472 1.15154e+06 8.86305e+07 5.45686e+06 25497 4.36304e+07 0 0.183114 0.989048 0.773059 8.76598e+07 0.00328044 1.82347e+07 9.55508e+06 1.84474e+07 245 1.84224e+07 1.23014e+07 0.00270735 1.83995e+07 49.9689 0.0129926 0.990816 0 50.29 GTEX-1QEPI-3026-SM-EXOIW 1 B1 4 partly fragmented pieces 5.6 Brain Brain - Cerebellum 0002037 1038 884 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.983613 192077 0.957959 0.985722 0.793265 23194 1 76 0.0023411 370 0 9.41228e+07 0.0418317 4.33153e+06 9.54861e+07 5.67766e+06 23223 4.68192e+07 0 0.164693 0.985722 0.781939 9.41228e+07 0.00376258 2.0508e+07 1.10965e+07 2.07929e+07 339 2.07089e+07 7.29668e+06 0.00305032 2.07534e+07 50.0537 0.0453629 0.987832 0 50.3449 GTEX-1QL29-0002-SM-DE1JQ B1 Blood Whole Blood 0013756 -121 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QL29-0002-SM-DLIPA B1 Blood Whole Blood 0013756 -121 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-1QMI2-0004-SM-DE1JO B1 Blood Whole Blood 0013756 658 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QMI2-0004-SM-DLIQH B1 Blood Whole Blood 0013756 658 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QMI2-0006-SM-CY8H1 B1 7.3 Blood Whole Blood 0013756 658 BP-68986 RNA isolation_PAXgene Blood RNA (Manual) 11/13/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.923268 331748 0.987729 0.924909 0.811892 18626 1 76 0.00455528 113 0 1.15714e+08 0.0105279 254619 1.25109e+08 1.52267e+07 18634 5.74968e+07 0 0.175837 0.924909 0.750926 1.15714e+08 0.00751336 2.77652e+07 2.22657e+08 2.78582e+07 155 2.79113e+07 3.43769e+07 0.0060317 2.79541e+07 50.0384 0.00203518 0.92655 0 50.0836 GTEX-1QMI2-0226-SM-EVYBX 0 B1 6 pieces; trace dermal fat; squamous epithelium is ~35-40 microns 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 730 1119 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992606 418216 0.978545 0.993207 0.800528 23086 1 76 0.00195257 260 0 9.21839e+07 0.0211561 231816 9.28144e+07 3.86833e+06 23115 4.59601e+07 0 0.178017 0.993207 0.79509 9.21839e+07 0.00301493 2.00869e+07 9.49438e+06 2.02318e+07 243 2.02511e+07 1.66041e+07 0.00248343 2.01226e+07 49.8408 0.00249763 0.993807 0 50.1797 GTEX-1QMI2-0326-SM-EVYBY 0 B1 2 pieces, no adherent fat 6.7 Nerve Nerve - Tibial 0001323 732 1117 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989668 212404 0.964877 0.989952 0.728936 23404 1 76 0.00208928 144 0 6.41055e+07 0.0348104 247230 6.47562e+07 2.84258e+06 23432 3.19417e+07 0 0.235941 0.989952 0.721612 6.41055e+07 0.00293289 1.40955e+07 5.56716e+06 1.42035e+07 144 1.41406e+07 9.43226e+06 0.00251096 1.41784e+07 50.0667 0.00381786 0.990236 0 50.1908 GTEX-1QMI2-0426-SM-EWRND 0 B1 2 pieces, ~50% glandular elements, delineated; sample with care 7.9 Salivary Gland Minor Salivary Gland 0006330 734 1115 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986921 394284 0.971535 0.989991 0.763958 25495 1 76 0.00260389 231 0 9.1454e+07 0.0278839 380375 9.23786e+07 6.49883e+06 25538 4.54633e+07 0 0.207577 0.989991 0.756311 9.1454e+07 0.00349803 2.02075e+07 1.00118e+07 2.04664e+07 224 2.05448e+07 1.50773e+07 0.00303912 2.03809e+07 49.7998 0.00411757 0.99306 0 50.3183 GTEX-1QMI2-0526-SM-DTXFU 0 B1 2 pieces, trace interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 735 1114 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99595 579203 0.982896 0.996531 0.868176 20652 1 76 0.00172346 271 0 9.89104e+07 0.0168635 958774 9.92547e+07 4.20857e+06 20671 4.93121e+07 0 0.11472 0.996531 0.865164 9.89104e+07 0.00215547 2.16616e+07 8.66559e+06 2.17893e+07 288 2.18384e+07 2.19954e+07 0.00193934 2.16544e+07 49.7885 0.00965973 0.997111 0 50.1469 GTEX-1QMI2-0726-SM-E9J4F 0 B1 2 pieces, fibroadipose elements only 6.5 Breast Breast - Mammary Tissue 0008367 759 1090 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.977889 218531 0.978207 0.978524 0.810251 23684 1 76 0.00197375 279 0 1.0054e+08 0.0214458 906513 1.02747e+08 5.02698e+06 23718 5.01027e+07 0 0.167956 0.978524 0.79285 1.0054e+08 0.00266004 2.22105e+07 9.58574e+06 2.24265e+07 316 2.23026e+07 1.73853e+07 0.00231667 2.24021e+07 50.1114 0.00882276 0.979158 0 50.242 GTEX-1QMI2-0826-SM-EXUT4 1 B1 2 pieces, multinodular goitre; regressive changes 7.3 Thyroid Thyroid 0002046 768 1081 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.99044 526611 0.97294 0.99112 0.775804 23736 1 76 0.00187846 149 0 7.05237e+07 0.0266487 252047 7.11555e+07 2.19826e+06 23768 3.51197e+07 0 0.197136 0.99112 0.768915 7.05237e+07 0.0025294 1.55964e+07 6.25125e+06 1.56919e+07 157 1.57119e+07 1.26471e+07 0.00220371 1.56282e+07 49.8664 0.0035422 0.991801 0 50.1526 GTEX-1QMI2-0926-SM-DTX7S 1 B1 1 piece; pronounced edema; moderate-marked septal fibrosis 6.1 Lung Lung 0008952 770 1079 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.99032 667540 0.975217 0.992241 0.763526 24665 1 76 0.00217585 164 0 8.31776e+07 0.0243115 275195 8.38281e+07 3.79164e+06 24706 4.13471e+07 0 0.211691 0.992241 0.757601 8.31776e+07 0.00264953 1.83803e+07 6.70456e+06 1.83946e+07 184 1.85816e+07 1.43092e+07 0.00241223 1.83442e+07 49.6786 0.00328285 0.994161 0 50.0194 GTEX-1QMI2-1026-SM-DTX7T 1 B1 2 pieces, no abnormalities 6.6 Heart Heart - Atrial Appendage 0006631 779 1070 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991072 820361 0.982441 0.993284 0.81294 21385 1 76 0.00197039 195 0 8.65978e+07 0.0172627 2.2416e+06 8.71833e+07 3.70258e+06 21410 4.30447e+07 0 0.1695 0.993284 0.807481 8.65978e+07 0.00258262 1.83314e+07 8.07577e+06 1.83698e+07 219 1.85229e+07 1.4381e+07 0.00227582 1.83401e+07 49.7521 0.0257114 0.995496 0 50.0523 GTEX-1QMI2-1526-SM-EXOJT 2 B1 2 pieces, moderate congestion 5.5 Spleen Spleen 0002106 794 1055 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.976401 265868 0.958941 0.978366 0.734944 24805 1 76 0.00244537 203 0 8.786e+07 0.0405154 716091 8.98028e+07 5.19375e+06 24847 4.36671e+07 0 0.223997 0.978366 0.719044 8.786e+07 0.00382139 1.90282e+07 1.20664e+07 1.92158e+07 204 1.9167e+07 1.2481e+07 0.003132 1.92434e+07 50.0994 0.00797404 0.980331 0 50.2453 GTEX-1QMI2-1626-SM-EYYXK 1 B1 2 pieces, fragmented, ~10% fascia/mesothelial hyperplasia 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 795 1054 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984667 169393 0.975456 0.986862 0.781618 23314 1 76 0.00231254 165 0 7.74953e+07 0.024215 759615 7.85269e+07 2.93047e+06 23342 3.85509e+07 0 0.193838 0.986862 0.77135 7.74953e+07 0.00349717 1.70251e+07 7.26278e+06 1.72144e+07 189 1.71901e+07 1.18832e+07 0.00290354 1.72125e+07 50.0326 0.00967331 0.989058 0 50.2764 GTEX-1QMI2-1926-SM-EAZ4B 3 B1 2 pieces, cortex, advanced autolysis; ~15-20% adherent fat, delineated 5.7 Adrenal Gland Adrenal Gland 0002369 801 1048 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986252 383382 0.974751 0.987039 0.846376 23281 1 76 0.00220734 375 0 9.51905e+07 0.02493 3.17468e+06 9.64405e+07 8.06979e+06 23298 4.74295e+07 0 0.128374 0.987039 0.835406 9.51905e+07 0.00300347 2.08477e+07 1.29324e+07 2.11561e+07 335 2.10848e+07 1.51344e+07 0.00260509 2.10046e+07 49.9047 0.0329185 0.987825 0 50.3672 GTEX-1QMI2-2126-SM-DPRXQ 2 B1 6 pieces, mucosa up to ~1mm, 50-70% thickness, moderately-advanced autolysis 5.6 Stomach Stomach 0000945 812 1037 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.987219 131226 0.985963 0.988455 0.842372 20616 1 76 0.00201299 266 0 5.12341e+07 0.0136996 741252 5.18326e+07 2.71066e+06 20630 2.5505e+07 0 0.143591 0.988455 0.832646 5.12341e+07 0.00288281 1.18981e+07 6.18736e+07 1.20981e+07 165 1.20932e+07 1.26909e+07 0.00244735 1.19624e+07 49.728 0.0143009 0.98969 0 50.4168 GTEX-1QMI2-2326-SM-E76PE 2 B1 6 pieces; confirmed target muscularis 5.6 Esophagus Esophagus - Muscularis 0004648 819 1030 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992398 406975 0.969575 0.993805 0.748786 23799 1 76 0.0021322 273 0 1.01795e+08 0.0302144 1.45692e+06 1.0243e+08 6.45858e+06 23846 5.06914e+07 0 0.220789 0.993805 0.744148 1.01795e+08 0.00296951 2.2037e+07 9.24806e+06 2.22553e+07 285 2.22463e+07 1.42364e+07 0.00255026 2.21836e+07 49.9295 0.0142236 0.995212 0 50.2464 GTEX-1QMI2-2526-SM-E8VNZ 0 B1 6 pieces, trace dermal fat, squamous epithelium is 30-45 microns 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 825 1024 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988494 331609 0.974398 0.98969 0.773974 23156 1 76 0.00182252 167 0 7.06426e+07 0.0253572 235219 7.13785e+07 3.49441e+06 23188 3.51931e+07 0 0.200423 0.98969 0.765995 7.06426e+07 0.00233268 1.54566e+07 6.78277e+06 1.55256e+07 157 1.55382e+07 1.27663e+07 0.00207729 1.55246e+07 49.9782 0.00329537 0.990885 0 50.1113 GTEX-1QMI2-2626-SM-E6CR4 3 B1 6 pieces, target mucosa up to ~0.4mm, ~20-25% thickness. Glandular elements sloughed, lamina propria only 5.5 Colon Colon - Transverse 0001157 829 1020 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990526 342850 0.971383 0.992537 0.77974 24285 1 76 0.00259191 152 0 7.52277e+07 0.0282753 691215 7.57933e+07 1.36778e+07 24315 3.74132e+07 0 0.191643 0.992537 0.773921 7.52277e+07 0.00364299 1.64779e+07 7.62218e+06 1.64213e+07 173 1.64179e+07 1.13514e+07 0.00311638 1.6623e+07 50.3103 0.00911974 0.994549 0 49.914 GTEX-1QMI2-2826-SM-DPRXR 2 B1 2 pieces, moderate tubular autolysis; spermatogenesis is present, appears reduced 6.8 Testis Testis 0000473 834 1015 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992897 323167 0.926589 0.993622 0.721772 32914 1 76 0.00208765 152 0 7.62656e+07 0.0730806 596626 7.67551e+07 4.3218e+06 32974 3.80097e+07 0 0.204816 0.993622 0.717169 7.62656e+07 0.0025385 1.5728e+07 9.55816e+06 1.58288e+07 155 1.58369e+07 1.24782e+07 0.00231291 1.57667e+07 49.8889 0.00777311 0.994347 0 50.1597 GTEX-1QMI2-3026-SM-E9U5W 2 B1 1 piece (fragmented), adenohypophysis with ~4x1.5mm neurohypophysis, delineated, ~20% of specimen 6.4 Pituitary Pituitary 0000007 1055 794 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990976 278090 0.964656 0.991806 0.772139 25016 1 76 0.00195766 155 0 7.38177e+07 0.0350863 230102 7.44276e+07 2.94242e+06 25049 3.67896e+07 0 0.192517 0.991806 0.765812 7.38177e+07 0.00273343 1.56473e+07 8.40159e+06 1.5719e+07 169 1.5712e+07 1.18954e+07 0.00234522 1.57126e+07 50.001 0.00309162 0.992635 0 50.1142 GTEX-1QMI2-3126-SM-EXUT5 1 B1 5 pieces, fragmented, no abnormalities 6.4 Brain Brain - Cortex 0001870 1059 790 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.992048 502207 0.966611 0.992754 0.829496 23186 1 76 0.00190453 160 0 6.80887e+07 0.0330718 2.13748e+06 6.85857e+07 2.06029e+06 23199 3.39159e+07 0 0.137115 0.992754 0.823486 6.80887e+07 0.00249454 1.49847e+07 6.15805e+06 1.5155e+07 199 1.51068e+07 8.44052e+06 0.00219933 1.50679e+07 49.9356 0.0311651 0.993461 0 50.2826 GTEX-1QP28-0004-SM-DE1JK B1 Blood Whole Blood 0013756 -149 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP28-0004-SM-DLIQJ B1 Blood Whole Blood 0013756 -149 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP28-0006-SM-DLZQW B1 7.2 Blood Whole Blood 0013756 -149 BP-68986 RNA isolation_PAXgene Blood RNA (Manual) 11/13/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.975421 587643 0.972992 0.982708 0.820816 17002 1 76 0.00224581 120 0 8.65389e+07 0.026338 342479 8.80617e+07 6.79587e+06 17006 4.28181e+07 0 0.152176 0.982708 0.806622 8.65389e+07 0.00430392 1.98852e+07 9.62446e+07 1.99421e+07 151 2.02891e+07 2.20669e+07 0.00326723 2.01808e+07 49.8661 0.00388908 0.989994 0 50.0714 GTEX-1QP28-0226-SM-E9J2N 0 B1 2 pieces, 10-15% fascia, rep delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 785 906 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.98423 269100 0.975027 0.984951 0.815501 22520 1 76 0.00184005 200 0 8.16564e+07 0.0247177 485615 8.2904e+07 4.22504e+06 22542 4.06926e+07 0 0.159526 0.984951 0.803229 8.16564e+07 0.00253711 1.79041e+07 7.32953e+06 1.81023e+07 214 1.79842e+07 1.40501e+07 0.00218832 1.80844e+07 50.1389 0.00585755 0.985671 0 50.2753 GTEX-1QP28-0326-SM-DTXDY 0 B1 2 pieces, adherent fatty nubbins up to ~2.5mm, ~30-35% of total tissue. Sample with care 7 Nerve Nerve - Tibial 0001323 787 904 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993981 508178 0.965186 0.99456 0.73645 23851 1 76 0.00210518 177 0 7.85723e+07 0.0345382 196274 7.9002e+07 4.1441e+06 23890 3.91466e+07 0 0.228736 0.99456 0.732444 7.85723e+07 0.00239014 1.72736e+07 7.26828e+06 1.73302e+07 175 1.73883e+07 1.22632e+07 0.00224758 1.72627e+07 49.8187 0.00248442 0.99514 0 50.0818 GTEX-1QP28-0426-SM-E8VOL 0 B1 2 pieces, no adherent fat or significant atherosis 7.1 Blood Vessel Artery - Tibial 0007610 789 902 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988483 267171 0.973794 0.989617 0.824907 19024 1 76 0.00171909 123 0 4.83325e+07 0.0258292 211735 4.88396e+07 2.62418e+06 19038 2.40674e+07 0 0.148888 0.989617 0.816342 4.83325e+07 0.00226619 1.0415e+07 3.12372e+06 1.04976e+07 124 1.04626e+07 8.89398e+06 0.00199233 1.05035e+07 50.0976 0.00433531 0.990752 0 50.1975 GTEX-1QP28-0526-SM-E8VNR 0 B1 2 pieces, ~30% adherent/interstitial fat/vascular elements, rep delineated. Sample carefully. 8 Muscle Muscle - Skeletal 0011907 794 897 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.990806 451743 0.984048 0.992203 0.884998 18580 1 76 0.00146601 168 0 6.76409e+07 0.0157243 819261 6.81724e+07 3.24251e+06 18589 3.36988e+07 0 0.0990498 0.992203 0.878097 6.76409e+07 0.00205346 1.50147e+07 8.19136e+06 1.51879e+07 178 1.51836e+07 1.40336e+07 0.00175932 1.51011e+07 49.8638 0.0120175 0.9936 0 50.2868 GTEX-1QP28-0626-SM-E76P5 1 B1 2 pieces, ~15-20% adherent fat/vascular elements, delineated; nodular goitre, regressive changes 7.6 Thyroid Thyroid 0002046 853 838 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992178 438927 0.973291 0.99366 0.80745 24956 1 76 0.00185674 277 0 1.01406e+08 0.0262791 221100 1.02053e+08 6.47675e+06 24993 5.05121e+07 0 0.165841 0.99366 0.802331 1.01406e+08 0.00267462 2.22914e+07 8.82242e+06 2.24336e+07 293 2.24851e+07 2.03291e+07 0.00226507 2.23785e+07 49.8812 0.00216652 0.995141 0 50.1589 GTEX-1QP28-0926-SM-EVR4D 1 B1 2 pieces, mesothelial hyerplasia/vascular elements 5-10% of tissue, rep delineated. 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 863 828 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98963 360282 0.976902 0.991362 0.833195 24789 1 76 0.00217258 383 0 1.25021e+08 0.022729 453861 1.2611e+08 9.13499e+06 24825 6.22558e+07 0 0.143708 0.991362 0.825998 1.25021e+08 0.00317862 2.75605e+07 1.24885e+07 2.78229e+07 337 2.77733e+07 2.34488e+07 0.00267472 2.78104e+07 50.0334 0.00359892 0.993095 0 50.2369 GTEX-1QP28-1026-SM-EAZ4K 1 B1 2 pieces, mild saponification; islets well- preserved, moderate numbers, rep encircled 6.2 Pancreas Pancreas 0001150 866 825 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991459 461064 0.978402 0.992073 0.84836 22623 1 76 0.00222526 155 0 1.12837e+08 0.0211602 256634 1.13738e+08 9.07549e+06 22656 5.62424e+07 0 0.130042 0.992073 0.841635 1.12837e+08 0.00302741 2.60277e+07 3.47314e+07 2.62272e+07 176 2.61211e+07 3.46501e+07 0.00262609 2.62037e+07 50.0789 0.00225636 0.992687 0 50.1909 GTEX-1QP28-1126-SM-EVYC4 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~30-40 microns 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 871 820 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990151 326411 0.970652 0.99072 0.779148 22584 1 76 0.0020015 184 0 7.74339e+07 0.0291576 371846 7.81592e+07 3.60472e+06 22613 3.86024e+07 0 0.191504 0.99072 0.771918 7.74339e+07 0.00294824 1.69873e+07 8.6962e+06 1.71514e+07 182 1.71022e+07 1.2931e+07 0.0024746 1.70874e+07 49.9784 0.00475755 0.99129 0 50.2403 GTEX-1QP28-1226-SM-E9J2M 0 B1 2 pieces, mainly fibradipose elements; focal duct/lobular elements, ensquared 6.7 Breast Breast - Mammary Tissue 0008367 882 809 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.982843 348888 0.970012 0.983663 0.835359 22387 1 76 0.00184116 170 0 7.42786e+07 0.0296318 713418 7.55122e+07 4.07374e+06 22401 3.70001e+07 0 0.134653 0.983663 0.821712 7.42786e+07 0.00262437 1.61928e+07 1.0461e+07 1.64395e+07 198 1.63282e+07 1.26908e+07 0.00223244 1.6371e+07 50.0654 0.00944772 0.984483 0 50.3781 GTEX-1QP28-1326-SM-DPRXZ 0 B1 2 pieces, normal post menopausal regressive changes 7.4 Ovary Ovary 0000992 906 785 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994119 233903 0.966323 0.994874 0.7222 22402 1 76 0.00197024 122 0 5.63898e+07 0.0334745 90737 5.66804e+07 3.08329e+06 22438 2.80972e+07 0 0.244123 0.994874 0.718497 5.63898e+07 0.0025735 1.23638e+07 6.46309e+06 1.24863e+07 121 1.24609e+07 9.55485e+06 0.00227164 1.24336e+07 49.9451 0.00160085 0.995628 0 50.2465 GTEX-1QP28-1426-SM-EVR4E 1 B1 6 pieces, squamous mucosa up to ~0.2mm 7.3 Vagina Vagina 0000996 910 781 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988104 415098 0.973861 0.990207 0.784321 25490 1 76 0.00228282 283 0 1.39951e+08 0.0257732 143242 1.41335e+08 1.08138e+07 25534 6.96638e+07 0 0.189539 0.990207 0.776641 1.39951e+08 0.0037747 3.13555e+07 1.94337e+07 3.16197e+07 328 3.16762e+07 2.75445e+07 0.00302718 3.15814e+07 49.925 0.00101349 0.99231 0 50.2097 GTEX-1QP28-1526-SM-E76P6 1 B1 2 pieces, myometrium only 7.7 Uterus Uterus 0000995 911 780 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.9936 553617 0.972958 0.994902 0.833641 22613 1 76 0.00176793 182 0 8.32156e+07 0.0267538 57181 8.3642e+07 5.06393e+06 22632 4.14345e+07 0 0.139317 0.994902 0.829392 8.32156e+07 0.00257639 1.81687e+07 7.80012e+06 1.82245e+07 191 1.83123e+07 1.81505e+07 0.00217163 1.81889e+07 49.8309 0.00068364 0.996204 0 50.0767 GTEX-1QP28-1626-SM-E8VOI 1 B1 6 pieces, confirmed target muscularis, few ~1mm nubbins of adherent cardiac mucosa 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 917 774 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.989344 911193 0.97686 0.991715 0.839384 24944 1 76 0.00208503 301 0 1.57026e+08 0.0227401 362221 1.58337e+08 1.31778e+07 24981 7.81189e+07 0 0.137477 0.991715 0.83243 1.57026e+08 0.00327753 3.39195e+07 1.40891e+07 3.4784e+07 330 3.51226e+07 3.49846e+07 0.00267985 3.38936e+07 49.1096 0.00228765 0.994086 0 50.6292 GTEX-1QP28-1726-SM-E6CRK 1 B1 6 pieces, target lymphoid aggregates up to ~40% of specimen 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 921 770 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990668 407306 0.959681 0.992475 0.740906 24560 1 76 0.00254625 148 0 7.45802e+07 0.0397556 195294 7.51456e+07 1.31806e+07 24603 3.70861e+07 0 0.218775 0.992475 0.735331 7.45802e+07 0.00347385 1.6402e+07 9.55148e+06 1.61647e+07 157 1.62172e+07 1.24091e+07 0.0030092 1.6478e+07 50.3988 0.00259887 0.994282 0 49.6357 GTEX-1QP28-1826-SM-EAZ4L 1 B1 6 pieces, squamous mucosa is ~0.2mm, ~10% of thickness, prominent submucosal mucus gland present, rep delineated 8.6 Esophagus Esophagus - Mucosa 0006920 928 763 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.992091 583168 0.969842 0.993004 0.794521 24899 1 76 0.00207473 385 0 1.28667e+08 0.0297842 470241 1.29574e+08 1.05254e+07 24934 6.41356e+07 0 0.175321 0.993004 0.788963 1.28667e+08 0.00310416 2.86778e+07 1.73022e+07 2.88962e+07 338 2.8879e+07 2.57435e+07 0.00258897 2.88046e+07 49.9355 0.00362913 0.993918 0 50.1896 GTEX-1QP28-2126-SM-DTX8B 1 B1 6 pieces, target mucosa up to 0.9m, ~10-20% thickness. Early surface sloughing 7.4 Stomach Stomach 0000945 936 755 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991794 684645 0.973014 0.99361 0.799435 22611 1 76 0.00189529 176 0 7.86362e+07 0.0267594 349223 7.91419e+07 3.70002e+06 22635 3.91145e+07 0 0.173578 0.99361 0.794327 7.86362e+07 0.00227465 1.71669e+07 6.85005e+06 1.72034e+07 193 1.734e+07 1.32954e+07 0.00208463 1.71628e+07 49.7433 0.00441262 0.995426 0 50.0531 GTEX-1QP28-2226-SM-DTX8C 1 B1 6 pieces, confirmed target muscularis. 7.4 Colon Colon - Sigmoid 0001159 942 749 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990611 1.02832e+06 0.974992 0.992694 0.81136 22105 1 76 0.00191626 175 0 7.7167e+07 0.0247436 323034 7.7735e+07 3.64147e+06 22123 3.83438e+07 0 0.163632 0.992694 0.805432 7.7167e+07 0.00239676 1.67912e+07 6.38541e+06 1.67591e+07 183 1.70304e+07 1.38819e+07 0.002156 1.66638e+07 49.456 0.00415558 0.994777 0 49.9523 GTEX-1QP29-0004-SM-DE1JL B1 Blood Whole Blood 0013756 -133 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP29-0004-SM-DLIQG B1 Blood Whole Blood 0013756 -133 BP-68994 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP29-0005-SM-DLZQX B1 7.9 Blood Whole Blood 0013756 -133 BP-68986 RNA isolation_PAXgene Blood RNA (Manual) 11/13/2015 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.972422 888192 0.953458 0.983949 0.794726 18833 1 76 0.00259455 128 0 6.98461e+07 0.046197 189841 7.09856e+07 5.1309e+06 18845 3.44206e+07 0 0.158732 0.983949 0.781969 6.98461e+07 0.00553425 1.49742e+07 2.60859e+07 1.49812e+07 141 1.54213e+07 1.35409e+07 0.00404718 1.53147e+07 49.8266 0.00267436 0.995476 0 50.0117 GTEX-1QP29-0126-SM-EAZ3S 1 B1 2 pieces; congestion 5.8 Spleen Spleen 0002106 326 950 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988994 363861 0.96112 0.989592 0.783274 24505 1 76 0.00286232 207 0 9.08891e+07 0.0367552 448815 9.18451e+07 7.56245e+06 24536 4.52155e+07 0 0.177846 0.989592 0.775121 9.08891e+07 0.0036018 1.99705e+07 1.59381e+07 2.00823e+07 243 2.00518e+07 1.39398e+07 0.00323184 2.00568e+07 50.0062 0.00488665 0.990189 0 50.1395 GTEX-1QP29-0226-SM-EVYBM 1 B1 6 pieces; atherosis (rep arrowed) 8.2 Blood Vessel Artery - Aorta 0001496 327 949 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.993061 535384 0.979357 0.993622 0.863772 22068 1 76 0.00172652 283 0 1.03236e+08 0.0201621 178741 1.03898e+08 4.26049e+06 22086 5.1467e+07 0 0.115585 0.993622 0.858262 1.03236e+08 0.00273246 2.2329e+07 6.44467e+06 2.25901e+07 305 2.25734e+07 2.34085e+07 0.0022292 2.2403e+07 49.8105 0.00172035 0.994182 0 50.2906 GTEX-1QP29-0326-SM-E6CQ4 1 B1 2 pieces; cortex and medulla and prominent vein (arrow); ~1mm rim of fat 7.9 Adrenal Gland Adrenal Gland 0002369 327 949 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991929 582801 0.973754 0.99406 0.811945 23599 1 76 0.00216631 271 0 9.20251e+07 0.0259384 1.2799e+06 9.2575e+07 1.51881e+07 23630 4.57893e+07 0 0.161808 0.99406 0.807122 9.20251e+07 0.00325422 2.02537e+07 1.04113e+07 2.04183e+07 272 2.04422e+07 1.43565e+07 0.0027091 2.0393e+07 49.9398 0.0138256 0.996191 0 50.2023 GTEX-1QP29-0426-SM-EVR3Y 1 B1 2 pieces; decreased spermatogenesis and predominance of Sertolii cells 5.9 Testis Testis 0000473 530 746 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98881 433394 0.945035 0.990901 0.744495 34132 1 76 0.00234084 282 0 1.40745e+08 0.0547069 1.21208e+06 1.42037e+08 1.11411e+07 34198 7.00594e+07 0 0.200541 0.990901 0.73772 1.40745e+08 0.0034699 3.01552e+07 1.52461e+07 3.03992e+07 319 3.04343e+07 2.19928e+07 0.00290418 3.03837e+07 49.9585 0.00853356 0.992992 0 50.2015 GTEX-1QP29-0526-SM-EAZ3T 1 B1 2 pieces; mild to moderate autolysis; fibromuscular stroma and glandular component with focally sloughed epithelium 6.6 Prostate Prostate 0002367 533 743 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989409 395190 0.964197 0.99023 0.762377 24984 1 76 0.00215486 210 0 8.74831e+07 0.0354841 300285 8.83463e+07 7.66501e+06 25025 4.35818e+07 0 0.20182 0.99023 0.754928 8.74831e+07 0.00295283 1.92696e+07 8.59994e+06 1.94034e+07 224 1.93534e+07 1.28013e+07 0.00255352 1.93948e+07 50.0534 0.00339895 0.991051 0 50.173 GTEX-1QP29-0626-SM-EWRMX 1 B1 6 pieces; trace periadnexal fat; epidermis 36 micron thick; rare hair follicles (arrows) 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 539 737 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.983379 272727 0.971701 0.986533 0.774851 24581 1 76 0.00251465 231 0 9.01602e+07 0.028078 444206 9.1391e+07 6.68778e+06 24621 4.48256e+07 0 0.196851 0.986533 0.764416 9.01602e+07 0.00343365 1.96134e+07 8.50884e+06 1.98693e+07 218 1.98983e+07 1.45625e+07 0.00296194 1.98426e+07 49.9299 0.0048605 0.989687 0 50.3241 GTEX-1QP29-0726-SM-DTXFM 1 B1 2 pieces; mature adipose tissue, fibrovascular component and nerves (outlined) 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 543 733 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994402 495457 0.977639 0.995415 0.828015 22690 1 76 0.00195098 281 0 8.94065e+07 0.0220449 458449 8.98183e+07 4.64475e+06 22713 4.45557e+07 0 0.149623 0.995415 0.824219 8.94065e+07 0.00238746 1.97087e+07 8.17308e+06 1.98533e+07 267 1.98909e+07 1.59614e+07 0.002169 1.97616e+07 49.8369 0.00510418 0.996429 0 50.1827 GTEX-1QP29-0826-SM-E9J4Q 1 B1 2 pieces; over 1mm attached adventitia with vessels 7.7 Blood Vessel Artery - Tibial 0007610 547 729 BP-83440 RNA Extraction from Paxgene-derived Lysate Plate Based 02/22/2017 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987748 628455 0.975184 0.988716 0.812655 21611 1 76 0.0018658 205 0 8.9061e+07 0.0244287 194148 9.00774e+07 4.55940e+06 21633 4.43431e+07 0 0.162529 0.988716 0.803484 8.9061e+07 0.00275037 1.92783e+07 6.11904e+06 1.93987e+07 215 1.93269e+07 1.69288e+07 0.00230765 1.94372e+07 50.1424 0.00215535 0.989683 0 50.1556 GTEX-1QP29-0926-SM-EVYBN 1 B1 2 pieces; nerve fascicles surrounded by prineurium; trace of internal and external fat (arrows) 7.1 Nerve Nerve - Tibial 0001323 550 726 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988933 393495 0.967337 0.989637 0.757609 23932 1 76 0.00205851 201 0 8.15886e+07 0.0323833 140971 8.2443e+07 3.80106e+06 23973 4.06506e+07 0 0.209728 0.989637 0.749758 8.15886e+07 0.00309297 1.78984e+07 7.06392e+06 1.80807e+07 191 1.80162e+07 1.31295e+07 0.00257537 1.80232e+07 50.0098 0.00170992 0.990341 0 50.2534 GTEX-1QP29-1226-SM-E6CQ1 1 B1 6 pieces; patchy intra-alveolar red blood cell extravasation and fresh hemorrhage (outlined); patchy neutrophilic infiltration of alveolar septa and intra-alveolar aggregates of neutrophils (arrows) 8.2 Lung Lung 0008952 583 693 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992882 324785 0.973207 0.994491 0.794654 23601 1 76 0.0023068 163 0 7.53234e+07 0.0264653 220156 7.57407e+07 1.36078e+07 23627 3.74988e+07 0 0.178553 0.994491 0.790276 7.53234e+07 0.00313139 1.68396e+07 6.55598e+06 1.6588e+07 170 1.66212e+07 1.37278e+07 0.00271843 1.69205e+07 50.4461 0.00290671 0.9961 0 49.6237 GTEX-1QP29-1326-SM-E6CQ2 1 B1 2 pieces; ~1mm eccentric fibrosclerotic plaque narrowing the lumen by 50%; up to 2mm adventitial fat 7.3 Blood Vessel Artery - Coronary 0001621 607 669 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992477 469489 0.974567 0.994235 0.807224 23601 1 76 0.00225977 171 0 8.68142e+07 0.024992 163749 8.73177e+07 1.52153e+07 23631 4.32027e+07 0 0.167343 0.994235 0.80257 8.68142e+07 0.00325556 1.90221e+07 7.45019e+06 1.8736e+07 197 1.87733e+07 1.68607e+07 0.00275678 1.91252e+07 50.4642 0.00187533 0.995992 0 49.6211 GTEX-1QP29-1426-SM-DTX9Q 1 B1 2 pieces; essentially well trimmed fibromuscular tissue 7.6 Heart Heart - Atrial Appendage 0006631 608 668 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990436 1.27598e+06 0.973609 0.992379 0.802812 22603 1 76 0.00182745 190 0 8.0365e+07 0.0261838 559149 8.09822e+07 3.56700e+06 22637 3.98897e+07 0 0.170797 0.992379 0.796693 8.0365e+07 0.00220694 1.73869e+07 1.056e+07 1.72205e+07 207 1.76921e+07 1.27337e+07 0.00201682 1.70463e+07 49.0705 0.00690459 0.994322 0 49.7596 GTEX-1QP29-1526-SM-EXUSY 1 B1 2 pieces; accentuation of interstitial connective tissue 7.6 Heart Heart - Left Ventricle 0006566 609 667 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.990291 209843 0.976479 0.990653 0.839229 20693 1 76 0.00147295 152 0 6.67417e+07 0.023338 698437 6.73714e+07 1.81386e+06 20714 3.32845e+07 0 0.137249 0.990653 0.831385 6.67417e+07 0.00193669 1.46783e+07 5.67064e+06 1.4817e+07 172 1.47684e+07 1.17397e+07 0.00170474 1.47439e+07 49.9584 0.010367 0.991016 0 50.2351 GTEX-1QP29-1626-SM-EXUSZ 1 B1 2 pieces; lobulated mature adipose tissue with fibrovascular component 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 633 643 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989427 309428 0.969458 0.990085 0.788209 21541 1 76 0.00169718 125 0 5.3687e+07 0.0302939 237884 5.42247e+07 1.46665e+06 21562 2.67537e+07 0 0.181249 0.990085 0.780394 5.3687e+07 0.0022247 1.17587e+07 4.43512e+06 1.18521e+07 137 1.1836e+07 8.31361e+06 0.00196076 1.18069e+07 49.9383 0.00438701 0.990744 0 50.1979 GTEX-1QP29-1726-SM-E8VMQ 1 B1 2 pieces; adipose tissue and gynecomastoid ductal and stromal hyperplasia 6.6 Breast Breast - Mammary Tissue 0008367 634 642 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.975182 311743 0.971159 0.97625 0.815706 23942 1 76 0.00164442 179 0 7.9009e+07 0.0285855 455095 8.09311e+07 4.2535e+06 23973 3.93481e+07 0 0.155454 0.97625 0.796333 7.9009e+07 0.00224082 1.72937e+07 8.19235e+06 1.74724e+07 195 1.73801e+07 1.49732e+07 0.0019423 1.74759e+07 50.1375 0.00562324 0.977319 0 50.257 GTEX-1QP29-1826-SM-DTX9S 1 B1 4 pieces; hair bearing skin and ~5% periadnexal (internal) fat (outlined) 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 635 641 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989842 1.90741e+06 0.964237 0.992 0.805081 23059 1 76 0.00191525 187 0 8.26819e+07 0.0355145 255709 8.33487e+07 3.80511e+06 23080 4.10487e+07 0 0.159156 0.992 0.798641 8.26819e+07 0.00246111 1.82071e+07 1.98479e+07 1.8083e+07 177 1.86645e+07 1.78323e+07 0.00218759 1.78052e+07 48.8219 0.00306794 0.994159 0 49.8291 GTEX-1QP29-1926-SM-DPRZO 1 B1 2 pieces; well preserved gland and Langerhans islets (rep outlined) 6.9 Pancreas Pancreas 0001150 636 640 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994029 250132 0.977159 0.994902 0.830432 21311 1 76 0.00211921 102 0 6.47717e+07 0.0224967 68886 6.51036e+07 3.74696e+06 21334 3.22753e+07 0 0.146727 0.994902 0.826198 6.47717e+07 0.00264906 1.48604e+07 1.52696e+07 1.50305e+07 107 1.50032e+07 1.8375e+07 0.0023839 1.49471e+07 49.9065 0.0010581 0.995774 0 50.2845 GTEX-1QP29-2026-SM-DTX9R 1 B1 6 pieces; well trimmed target muscularis 8 Esophagus Esophagus - Muscularis 0004648 643 633 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992347 772598 0.973784 0.994229 0.817727 22669 1 76 0.00184051 212 0 8.86866e+07 0.025891 229405 8.92014e+07 3.964e+06 22690 4.41293e+07 0 0.156057 0.994229 0.813008 8.86866e+07 0.00221177 1.91181e+07 6.80258e+06 1.92307e+07 216 1.93859e+07 1.7009e+07 0.00202579 1.9115e+07 49.6481 0.00257176 0.996111 0 50.1469 GTEX-1QP29-2126-SM-E6CPZ 1 B1 6 pieces; only focal superficial desquamation; stratified squamous epithelium measures ~ 0.2mm in thickness; submucosal glands (outlined) and dystrophic calcifications (arrows) 5.6 Esophagus Esophagus - Mucosa 0006920 645 631 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991455 247600 0.969627 0.993162 0.798062 23024 1 76 0.00228388 140 0 6.98042e+07 0.0301398 490717 7.02848e+07 1.23421e+07 23045 3.47339e+07 0 0.171565 0.993162 0.792605 6.98042e+07 0.00334312 1.53814e+07 7.39891e+06 1.5329e+07 165 1.52854e+07 1.12456e+07 0.00281259 1.55357e+07 50.406 0.00698183 0.994869 0 49.9147 GTEX-1QP29-2326-SM-EXOJO 1 B1 6 pieces; mild to focally moderate colonic mucosa autolysis and well preserved muscularis; lymphoid aggregates 7.7 Stomach Stomach 0000945 651 625 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.967657 164139 0.957207 0.970146 0.812367 23407 1 76 0.00203563 239 0 7.10065e+07 0.0425724 446938 7.31916e+07 4.91172e+06 23432 3.52662e+07 0 0.144839 0.970146 0.788115 7.10065e+07 0.00358747 1.56612e+07 3.48809e+07 1.58929e+07 201 1.58016e+07 1.34313e+07 0.00280956 1.59072e+07 50.1664 0.00610641 0.972636 0 50.3672 GTEX-1QP29-2526-SM-E6CQ3 1 B1 6 pieces; well trimmed target muscularis 6.7 Colon Colon - Sigmoid 0001159 663 613 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991086 509221 0.968925 0.993233 0.776351 23883 1 76 0.00228568 171 0 8.03448e+07 0.0308369 293734 8.08922e+07 1.46761e+07 23909 3.9958e+07 0 0.192574 0.993233 0.771098 8.03448e+07 0.00340447 1.75238e+07 7.97428e+06 1.7423e+07 184 1.74512e+07 1.29947e+07 0.00284386 1.76556e+07 50.291 0.00363118 0.99538 0 49.8558 GTEX-1QP2A-0126-SM-E9J43 1 B1 6 pieces; 3 with and 3 without subcutaneous fat up to 1.2mm 8 Skin Skin - Sun Exposed (Lower leg) 0004264 398 584 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987896 628959 0.968799 0.988916 0.783072 24980 1 76 0.00183605 298 0 1.11186e+08 0.0309305 656961 1.12432e+08 5.25856e+06 25024 5.54104e+07 0 0.185727 0.988916 0.774393 1.11186e+08 0.0026975 2.42539e+07 1.50603e+07 2.4521e+07 329 2.44936e+07 1.94881e+07 0.00226633 2.43948e+07 49.899 0.00584316 0.989936 0 50.2738 GTEX-1QP2A-0226-SM-EVYBC 1 B1 2 partly fragmented pieces; 20% fibrous content in 1 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 400 582 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990937 325554 0.975928 0.991488 0.820377 22955 1 76 0.00191835 213 0 8.47053e+07 0.023723 665685 8.54325e+07 3.68215e+06 22980 4.22302e+07 0 0.155551 0.991488 0.813394 8.47053e+07 0.00288739 1.85569e+07 7.03199e+06 1.87778e+07 221 1.87107e+07 1.48758e+07 0.0024026 1.86714e+07 49.9474 0.00779194 0.992039 0 50.2958 GTEX-1QP2A-0326-SM-EVR3J 0 B1 2 pieces; 10 & 20 % internal fat content 5.5 Nerve Nerve - Tibial 0001323 404 578 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986891 168046 0.970649 0.988942 0.765828 23603 1 76 0.00221734 179 0 7.82759e+07 0.0290793 368129 7.91512e+07 6.01922e+06 23636 3.89596e+07 0 0.204821 0.988942 0.757359 7.82759e+07 0.00357905 1.71407e+07 6.62469e+06 1.73087e+07 183 1.72727e+07 1.24381e+07 0.00289678 1.73252e+07 50.0758 0.00465096 0.990993 0 50.2438 GTEX-1QP2A-0426-SM-E9J44 1 B1 2 pieces; well trimmed; mild focal intimal fibrous thickening 7.8 Blood Vessel Artery - Tibial 0007610 406 576 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.988766 536887 0.975881 0.989614 0.829348 22466 1 76 0.001813 281 0 1.00011e+08 0.0236945 440812 1.01061e+08 4.69691e+06 22493 4.98369e+07 0 0.146533 0.989614 0.820734 1.00011e+08 0.00247759 2.16588e+07 8.28627e+06 2.18754e+07 291 2.18149e+07 1.93254e+07 0.00214501 2.18027e+07 49.9861 0.00436184 0.990461 0 50.2488 GTEX-1QP2A-0526-SM-E8VN5 1 B1 2 pieces; <5% internal fat 7.9 Muscle Muscle - Skeletal 0011907 410 572 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.991353 466138 0.985068 0.992605 0.894955 18877 1 76 0.00140342 275 0 8.81484e+07 0.0146508 1.14845e+06 8.88052e+07 4.5202e+06 18883 4.39354e+07 0 0.0901126 0.992605 0.888336 8.81484e+07 0.00192081 1.91131e+07 9.86218e+06 1.93537e+07 257 1.93572e+07 1.96833e+07 0.00166179 1.92014e+07 49.798 0.0129323 0.993856 0 50.3127 GTEX-1QP2A-0626-SM-DKTRW 1 B1 2 pieces; no lesions; no nodules Thyroid Thyroid 0002046 420 562 BP-78545 DNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2016 LCSET-10450 01/17/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP2A-0626-SM-DLT2L 1 B1 2 pieces; no lesions; no nodules Thyroid Thyroid 0002046 420 562 BP-78545 DNA Extraction from Paxgene-derived Lysate Plate Based 09/16/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP2A-0626-SM-DTX9C 1 B1 2 pieces; no lesions; no nodules 7.6 Thyroid Thyroid 0002046 420 562 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990944 1.13118e+06 0.971015 0.992909 0.747245 24109 1 76 0.00194367 170 0 9.03322e+07 0.0286899 286647 9.09773e+07 3.88299e+06 24148 4.49256e+07 0 0.22377 0.992909 0.741946 9.03322e+07 0.00233926 1.99399e+07 8.02004e+06 1.98942e+07 193 2.0176e+07 1.56684e+07 0.00214108 1.98181e+07 49.5525 0.00315075 0.994873 0 49.9426 GTEX-1QP2A-0826-SM-DTXF5 1 B1 6 pieces; slight intimal fibrous thickening; well trimmed 6.5 Blood Vessel Artery - Aorta 0001496 431 551 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99356 641773 0.97803 0.994271 0.824476 21587 1 76 0.00207579 190 0 8.45583e+07 0.0216028 316598 8.50455e+07 4.73341e+06 21613 4.21132e+07 0 0.153553 0.994271 0.819753 8.45583e+07 0.00236176 1.84204e+07 6.20377e+06 1.84872e+07 206 1.85518e+07 1.58134e+07 0.00221867 1.84149e+07 49.8147 0.00372269 0.994983 0 50.0905 GTEX-1QP2A-0926-SM-E76QU 1 B1 2 pieces; focal mural sclerosis with large, up to 1.2mm, calcium deposits 7 Blood Vessel Artery - Coronary 0001621 442 540 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992899 458255 0.974664 0.994361 0.824938 22073 1 76 0.00178625 199 0 8.51778e+07 0.0249912 404325 8.56608e+07 5.51321e+06 22096 4.24101e+07 0 0.149726 0.994361 0.820287 8.51778e+07 0.00286448 1.83424e+07 5.86615e+06 1.84576e+07 211 1.84806e+07 1.59217e+07 0.00232457 1.84371e+07 49.9411 0.00472007 0.995824 0 50.1566 GTEX-1QP2A-1126-SM-EVR3H 1 B1 2 pieces; several small foci of fibrosis in 1 piece 8.3 Heart Heart - Left Ventricle 0006566 448 534 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990829 393154 0.984362 0.99291 0.865864 22168 1 76 0.00186677 373 0 1.42007e+08 0.0154163 2.58534e+06 1.43021e+08 1.07283e+07 22187 7.07137e+07 0 0.118498 0.99291 0.859725 1.42007e+08 0.00306526 3.09448e+07 2.19401e+07 3.13019e+07 338 3.11981e+07 2.51545e+07 0.00246476 3.13057e+07 50.0861 0.0180766 0.994991 0 50.2869 GTEX-1QP2A-1226-SM-EVR3I 1 B1 2 pieces; slight alveolar edema; moderate numbers of alveolar macrophages; no fibrosis; focal carbon deposits 7.9 Lung Lung 0008952 460 522 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989435 290301 0.976332 0.991354 0.794886 24411 1 76 0.00235577 278 0 1.14084e+08 0.0232836 519580 1.15079e+08 8.48863e+06 24451 5.67918e+07 0 0.181446 0.991354 0.788013 1.14084e+08 0.00352031 2.52889e+07 9.75127e+06 2.55475e+07 313 2.55173e+07 2.05537e+07 0.00293692 2.55213e+07 50.0039 0.00451498 0.993273 0 50.2543 GTEX-1QP2A-1326-SM-EAZ3K 1 B1 2 pieces; well preserved; 30% internal fat content 6.5 Pancreas Pancreas 0001150 493 489 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990119 525430 0.972112 0.990921 0.806007 23455 1 76 0.00237896 133 0 1.00287e+08 0.0275808 424411 1.01206e+08 8.202e+06 23486 4.99753e+07 0 0.166105 0.990921 0.798689 1.00287e+08 0.00323301 2.28296e+07 3.04789e+07 2.30697e+07 162 2.29854e+07 2.61609e+07 0.00280564 2.30007e+07 50.0166 0.00419354 0.991722 0 50.2615 GTEX-1QP2A-1526-SM-E6CPN 1 B1 2 pieces; well preserved glands with mild hyperplasia 5.8 Prostate Prostate 0002367 496 486 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.989417 196667 0.968372 0.991583 0.80623 23476 1 76 0.00227193 156 0 6.80197e+07 0.031409 1.49493e+06 6.85971e+07 1.21133e+07 23504 3.38287e+07 0 0.162142 0.991583 0.799443 6.80197e+07 0.00357505 1.49399e+07 8.47924e+06 1.53764e+07 195 1.53337e+07 7.07974e+06 0.00292207 1.5109e+07 49.6308 0.0217929 0.993748 0 50.7199 GTEX-1QP2A-1626-SM-E6CPO 1 B1 2 partially fragmented pieces; active spermatogenesis 6.6 Testis Testis 0000473 495 487 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991848 533400 0.930882 0.993501 0.733552 33036 1 76 0.00218894 213 0 9.25924e+07 0.0687625 1.05794e+06 9.31981e+07 1.55024e+07 33103 4.61e+07 0 0.19733 0.993501 0.728785 9.25924e+07 0.00295225 1.95035e+07 1.27726e+07 1.91668e+07 205 1.92622e+07 1.58817e+07 0.00256996 1.95379e+07 50.3552 0.0113515 0.995155 0 49.5646 GTEX-1QP2A-1726-SM-E76QC 0 B1 6 pieces; <5% dermal fat; well trimmed 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 497 485 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99132 485674 0.974929 0.992758 0.805514 22889 1 76 0.00179814 400 0 1.06099e+08 0.024869 671561 1.06872e+08 6.64967e+06 22922 5.28561e+07 0 0.169415 0.992758 0.799681 1.06099e+08 0.00256799 2.33099e+07 1.1409e+07 2.3449e+07 342 2.35273e+07 1.91386e+07 0.00218251 2.33741e+07 49.8367 0.00628376 0.994197 0 50.1487 GTEX-1QP2A-1826-SM-E76QD 0 B1 6 pieces; well dissected muscularis 7.4 Esophagus Esophagus - Muscularis 0004648 505 477 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992771 447797 0.975604 0.994306 0.81904 22754 1 76 0.00177765 282 0 9.97803e+07 0.0241292 853298 1.00352e+08 6.28511e+06 22777 4.97037e+07 0 0.156565 0.994306 0.814376 9.97803e+07 0.00273927 2.15312e+07 8.14098e+06 2.17041e+07 320 2.1753e+07 1.7396e+07 0.00225772 2.16252e+07 49.8526 0.00850308 0.995842 0 50.1999 GTEX-1QP2A-1926-SM-EXOJ9 0 B1 6 pieces; 1 piece has dilated submucosal ducts with inspissated material 7.6 Esophagus Esophagus - Mucosa 0006920 508 474 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975,LCSET-11230 06/05/2017 TruSeq.v1 RNASEQ 0.987546 420135 0.977083 0.989879 0.834158 22975 1 76 0.00392391 278 0 1.14999e+08 0.0224964 301743 1.16175e+08 5.87625e+06 22999 5.72226e+07 0 0.142925 0.989879 0.825716 1.14999e+08 0.00256189 2.59019e+07 1.55108e+07 2.60319e+07 317 2.60735e+07 2.49759e+07 0.0032445 2.61092e+07 50.0341 0.00259731 0.992213 0 50.1252 GTEX-1QP2A-2026-SM-DTX9D 0 B1 6 pieces; well dissected muscularis 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 502 480 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.99201 771970 0.976896 0.993888 0.828774 21613 1 76 0.00179377 163 0 7.12324e+07 0.0228301 594102 7.16705e+07 3.10445e+06 21634 3.54278e+07 0 0.148122 0.993888 0.823708 7.12324e+07 0.00218433 1.54882e+07 5.79238e+06 1.54508e+07 177 1.56241e+07 1.26481e+07 0.00198868 1.54368e+07 49.6986 0.00828935 0.995765 0 49.9395 GTEX-1QP2A-2126-SM-DPRZ7 1 B1 6 pieces; disruption of basal chief cell layer 6.4 Stomach Stomach 0000945 507 475 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.987251 183929 0.983317 0.988578 0.856764 20864 1 76 0.0016404 297 0 6.1537e+07 0.0164805 1.04854e+06 6.22481e+07 3.47165e+06 20876 3.06394e+07 0 0.126553 0.988578 0.846978 6.1537e+07 0.00254858 1.42125e+07 6.48885e+07 1.44121e+07 209 1.44152e+07 1.47863e+07 0.00209388 1.42856e+07 49.7742 0.0168445 0.989905 0 50.3486 GTEX-1QP2A-2226-SM-DTXF6 1 B1 6 pieces; variable amounts of perimuscular fat in 3 pieces, up to 40% area 7.9 Colon Colon - Sigmoid 0001159 513 469 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993994 797507 0.976717 0.995026 0.832402 23203 1 76 0.00187133 280 0 9.49606e+07 0.0229591 615183 9.54353e+07 4.98457e+06 23228 4.73001e+07 0 0.144315 0.995026 0.828262 9.49606e+07 0.00242182 2.0765e+07 7.64786e+06 2.08258e+07 267 2.09041e+07 1.72372e+07 0.00214629 2.0784e+07 49.856 0.00644607 0.996058 0 50.0731 GTEX-1QP2A-2426-SM-EXOJA 1 B1 6 pieces; 3 have abundant lymphoid deposits 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 521 461 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.97791 200446 0.962181 0.979966 0.792786 22577 1 76 0.0022193 121 0 5.52387e+07 0.0374447 554390 5.63679e+07 3.3618e+06 22598 2.74679e+07 0 0.169395 0.979966 0.776904 5.52387e+07 0.00372089 1.21088e+07 6.24148e+06 1.22501e+07 141 1.21731e+07 7.79127e+06 0.00296852 1.22851e+07 50.2289 0.0098352 0.982023 0 50.2901 GTEX-1QP2A-2526-SM-EXOJB 1 B1 2 pieces; 1 partially fragmented 7.9 Spleen Spleen 0002106 522 460 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.963836 217119 0.948016 0.966451 0.756228 23966 1 76 0.00259794 141 0 6.93107e+07 0.0510685 454553 7.17167e+07 4.77742e+06 24004 3.43984e+07 0 0.191788 0.966451 0.730857 6.93107e+07 0.00437016 1.49679e+07 8.61170e+06 1.51038e+07 157 1.50486e+07 1.05446e+07 0.00348165 1.51835e+07 50.223 0.00633818 0.969067 0 50.226 GTEX-1QP2A-2626-SM-EAZ3L 1 B1 2 pieces; cortex; 1 piece has 70% external fat 9 Adrenal Gland Adrenal Gland 0002369 527 455 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993085 589838 0.978697 0.993958 0.837683 23429 1 76 0.0018099 374 0 1.30168e+08 0.0209615 1.37249e+06 1.30959e+08 1.05782e+07 23465 6.48938e+07 0 0.141014 0.993958 0.832621 1.30168e+08 0.00252873 2.87041e+07 1.3653e+07 2.8988e+07 352 2.90107e+07 2.29565e+07 0.002169 2.8783e+07 49.8031 0.0104803 0.99483 0 50.246 GTEX-1QP66-0002-SM-DCXS5 B1 Blood Whole Blood 0013756 -37 BP-69036 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/16/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP66-0002-SM-DLIP7 B1 Blood Whole Blood 0013756 -37 BP-69036 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/16/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP66-0005-SM-CY8H4 B1 8.2 Blood Whole Blood 0013756 -37 BP-69038 RNA isolation_PAXgene Blood RNA (Manual) 11/16/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.990133 999873 0.964227 0.99209 0.83916 18750 1 76 0.00481491 206 0 9.94301e+07 0.0352326 595277 1.00223e+08 1.16713e+07 18762 4.94744e+07 0 0.125067 0.99209 0.832523 9.94301e+07 0.0077132 2.15712e+07 2.77478e+07 2.17325e+07 213 2.18029e+07 2.04381e+07 0.0062612 2.16945e+07 49.8754 0.00593954 0.994048 0 50.1863 GTEX-1QP66-0126-SM-EAZ3N 1 2 pieces; congestion; capsule included (arrows) 7.1 Spleen Spleen 0002106 47 1205 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986147 448454 0.961431 0.986778 0.770263 24914 1 76 0.00316754 273 0 1.07425e+08 0.0350782 478945 1.08864e+08 8.94642e+06 24954 5.33371e+07 0 0.191168 0.986778 0.760079 1.07425e+08 0.00393385 2.3672e+07 2.28921e+07 2.38258e+07 322 2.37865e+07 1.60594e+07 0.00355045 2.37818e+07 49.995 0.00439947 0.987409 0 50.1619 GTEX-1QP66-0226-SM-DPRXS 1 2 pieces; capsule included (Arrows) 6.8 Liver Liver 0001114 49 1203 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994826 295616 0.981969 0.995701 0.855737 20078 1 76 0.00186143 154 0 7.48051e+07 0.0174994 733501 7.51281e+07 3.7718e+06 20088 3.7273e+07 0 0.126231 0.995701 0.852058 7.48051e+07 0.00257536 1.60381e+07 1.23677e+07 1.62098e+07 199 1.61834e+07 1.4254e+07 0.00221808 1.61184e+07 49.8993 0.00976334 0.996576 0 50.2662 GTEX-1QP66-0326-SM-DTX7V 2 2 pieces; mild to moderate autolysis 5.7 Thyroid Thyroid 0002046 577 675 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991052 628231 0.967487 0.992859 0.758128 24427 1 76 0.00189152 208 0 9.12996e+07 0.0322476 226739 9.19562e+07 4.43277e+06 24472 4.54213e+07 0 0.209359 0.992859 0.752714 9.12996e+07 0.00225848 2.00039e+07 8.27359e+06 2.00348e+07 220 2.0201e+07 1.46096e+07 0.00207466 1.99929e+07 49.7411 0.00246573 0.994666 0 50.0385 GTEX-1QP66-0526-SM-E6CR5 1 6 pieces; target muscularis and serosa 7.4 Esophagus Esophagus - Muscularis 0004648 584 668 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992363 604937 0.977129 0.994298 0.847743 22345 1 76 0.00210804 214 0 9.3212e+07 0.0226014 355156 9.37466e+07 1.60417e+07 22363 4.63959e+07 0 0.129386 0.994298 0.842909 9.3212e+07 0.00324511 2.02999e+07 8.33824e+06 2.00827e+07 252 2.00866e+07 1.81938e+07 0.00267547 2.046e+07 50.4604 0.00378847 0.996232 0 49.7311 GTEX-1QP66-0626-SM-E76PD 1 2 pieces; adipose tissue and fibrovascular component 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 588 664 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993775 497548 0.976844 0.995187 0.81801 24695 1 76 0.00178729 379 0 1.20125e+08 0.0228928 708237 1.20706e+08 7.87983e+06 24734 5.98556e+07 0 0.158834 0.995187 0.814073 1.20125e+08 0.00261451 2.64234e+07 1.20611e+07 2.66651e+07 338 2.67449e+07 2.0831e+07 0.00220031 2.64996e+07 49.7697 0.00586747 0.996598 0 50.2276 GTEX-1QP66-1126-SM-DTXDP 1 6 pieces; early atherosis; up to 2.6mm attached adventitia with fat 7.1 Blood Vessel Artery - Aorta 0001496 611 641 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994586 745195 0.975325 0.995409 0.83264 22959 1 76 0.00188766 283 0 9.89654e+07 0.0242646 179808 9.94219e+07 4.77966e+06 22982 4.93061e+07 0 0.142685 0.995409 0.828817 9.89654e+07 0.00240563 2.14976e+07 6.63326e+06 2.15643e+07 275 2.16587e+07 1.94153e+07 0.00214643 2.1485e+07 49.7987 0.00180854 0.996232 0 50.0774 GTEX-1QP66-1226-SM-DTX7U 1 6 pieces; hair bearing skin with up to 40% external fat; ~7 hair follicles with associated sweat and apocrine glands (outlined 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 832 420 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991495 721459 0.97578 0.99321 0.80434 24517 1 76 0.00185855 180 0 8.27914e+07 0.0239212 385421 8.33574e+07 3.54806e+06 24544 4.11789e+07 0 0.171441 0.99321 0.798878 8.27914e+07 0.00222686 1.83978e+07 7.74131e+06 1.83614e+07 197 1.85772e+07 1.55487e+07 0.00204239 1.83129e+07 49.6417 0.00462372 0.994926 0 49.9505 GTEX-1QP66-1326-SM-DTXDQ 1 2 pieces; mature adipose with ~25% fibrovascular component and nerves 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 836 416 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995223 605120 0.979409 0.99595 0.842773 23431 1 76 0.00177864 282 0 1.11599e+08 0.0203255 664974 1.12053e+08 4.75462e+06 23456 5.56386e+07 0 0.136636 0.99595 0.83936 1.11599e+08 0.00218764 2.45945e+07 1.26493e+07 2.47737e+07 326 2.48692e+07 2.2155e+07 0.00198299 2.45766e+07 49.7041 0.00593448 0.996678 0 50.1815 GTEX-1QP66-1626-SM-E76PC 1 2 pieces; ~5% of moderately autolyzed internal fat 8.2 Muscle Muscle - Skeletal 0011907 837 415 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99328 659769 0.978347 0.994711 0.830995 22514 1 76 0.00162939 384 0 1.26544e+08 0.0213853 477828 1.27217e+08 7.94048e+06 22543 6.30533e+07 0 0.147352 0.994711 0.8266 1.26544e+08 0.00236057 2.75096e+07 1.0678e+07 2.77431e+07 343 2.78603e+07 2.60129e+07 0.00199445 2.7551e+07 49.7209 0.003756 0.996142 0 50.2113 GTEX-1QP66-1726-SM-E8VO1 1 6 pieces; up to 20% moderately autolyzed internal/external fat (outlined); epidermis ~35 micron thick 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 834 418 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.984078 308314 0.97139 0.985156 0.792009 23794 1 76 0.00167772 223 0 8.53597e+07 0.0284215 651584 8.66459e+07 4.24814e+06 23824 4.25385e+07 0 0.179381 0.985156 0.780252 8.53597e+07 0.00223231 1.87168e+07 9.04448e+06 1.89156e+07 241 1.87985e+07 1.2935e+07 0.00195472 1.89224e+07 50.1643 0.00752008 0.986234 0 50.2641 GTEX-1QP67-0004-SM-DE1JC B1 Blood Whole Blood 0013756 -62 BP-69036 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/16/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP67-0004-SM-DLIP9 B1 Blood Whole Blood 0013756 -62 BP-69036 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/16/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP67-0006-SM-CY8H5 B1 8.8 Blood Whole Blood 0013756 -62 BP-69038 RNA isolation_PAXgene Blood RNA (Manual) 11/16/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.987668 1.09194e+06 0.950668 0.990139 0.796776 19417 1 76 0.00495632 136 0 8.6486e+07 0.0487642 241664 8.73474e+07 1.06386e+07 19428 4.29816e+07 0 0.153892 0.990139 0.788919 8.6486e+07 0.00802724 1.88423e+07 5.09444e+07 1.89511e+07 154 1.90627e+07 1.75243e+07 0.00648795 1.89612e+07 49.8666 0.0027667 0.99261 0 50.144 GTEX-1QP67-0326-SM-EVR45 1 B1 2 pieces, no abnormalities 5.6 Thyroid Thyroid 0002046 251 780 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98444 241409 0.964915 0.986875 0.761133 24259 1 76 0.00226059 164 0 8.10484e+07 0.0348377 447973 8.21263e+07 6.43461e+06 24294 4.03152e+07 0 0.203782 0.986875 0.751143 8.10484e+07 0.0040162 1.76294e+07 8.06224e+06 1.78455e+07 193 1.77928e+07 1.13927e+07 0.00313623 1.78605e+07 50.095 0.00545469 0.98931 0 50.3047 GTEX-1QP67-0726-SM-DPRY1 1 B1 6 pieces, squamous mucosa up to ~0.4mm, ~20% thickness; submucosal mucus glands numerous, rep encircled 9.1 Esophagus Esophagus - Mucosa 0006920 263 768 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994468 266480 0.977984 0.995245 0.836842 22721 1 76 0.00194876 151 0 7.11909e+07 0.0215707 402923 7.1531e+07 4.10897e+06 22741 3.5484e+07 0 0.141142 0.995245 0.832863 7.11909e+07 0.00256357 1.60612e+07 8.13213e+06 1.61741e+07 160 1.61661e+07 1.52939e+07 0.00225593 1.61193e+07 49.9276 0.00563284 0.996022 0 50.1751 GTEX-1QP67-0826-SM-EVR46 1 B1 6 pieces, confirmed target muscularis; adherent rims of serosa up to ~1mm 8.1 Esophagus Esophagus - Muscularis 0004648 264 767 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990426 392014 0.976431 0.992345 0.849973 23141 1 76 0.00213706 287 0 1.08708e+08 0.0232174 1.40102e+06 1.09546e+08 8.54018e+06 23162 5.41186e+07 0 0.126457 0.992345 0.843467 1.08708e+08 0.00326632 2.34935e+07 1.21647e+07 2.38165e+07 317 2.37616e+07 2.00764e+07 0.0027006 2.37371e+07 49.9742 0.0127893 0.994265 0 50.3413 GTEX-1QP67-1026-SM-EVR47 1 B1 6 pieces; mucosa up to ~1mm, 30-80% thickness. Microglandular microcystic changes noted, rep ensquared (PRC consensus) 5.9 Stomach Stomach 0000945 268 763 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986722 154534 0.973637 0.988804 0.819503 22379 1 76 0.00214129 146 0 6.18819e+07 0.0260845 933229 6.25826e+07 4.88224e+06 22395 3.07908e+07 0 0.154133 0.988804 0.810328 6.18819e+07 0.00373082 1.35289e+07 5.10192e+06 1.36995e+07 154 1.36297e+07 9.95615e+06 0.00293438 1.37196e+07 50.1644 0.0149119 0.990885 0 50.3133 GTEX-1QP67-1126-SM-EAZ4C 1 B1 2 pieces, ~5-10% mesothelial/fascia hyerplasia, interstitial 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 270 761 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990192 369320 0.973246 0.99104 0.83065 23557 1 76 0.00218181 373 0 9.57389e+07 0.0265263 2.83935e+06 9.66044e+07 8.41934e+06 23585 4.77146e+07 0 0.142596 0.99104 0.823207 9.57389e+07 0.00289773 2.1028e+07 1.17228e+07 2.14114e+07 348 2.12414e+07 1.24328e+07 0.00253947 2.12679e+07 50.0312 0.0293915 0.991888 0 50.4518 GTEX-1QP67-1326-SM-EAZ4D 1 B1 6 pieces, fragmented, target mucosa (rep encircled) well-fixed, up to ~0.5mm 6.5 Colon Colon - Transverse 0001157 276 755 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990968 427396 0.972206 0.991873 0.81415 24974 1 76 0.00253324 376 0 1.11651e+08 0.0262532 2.81802e+06 1.12566e+08 9.20037e+06 25009 5.55627e+07 0 0.158055 0.991873 0.807534 1.11651e+08 0.00344249 2.48207e+07 1.4472e+07 2.50269e+07 352 2.495e+07 1.51496e+07 0.00298745 2.49822e+07 50.0322 0.0250344 0.992778 0 50.2068 GTEX-1QP67-1426-SM-E8VOO 1 B1 6 pieces, confirmed target muscularis 7.3 Colon Colon - Sigmoid 0001159 278 753 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98876 426645 0.975935 0.990055 0.836562 22164 1 76 0.00164693 203 0 7.74157e+07 0.0237761 640772 7.81933e+07 4.16043e+06 22178 3.85499e+07 0 0.139373 0.990055 0.828242 7.74157e+07 0.00241727 1.68863e+07 5.84178e+06 1.70023e+07 203 1.69579e+07 1.3875e+07 0.00203159 1.70262e+07 50.1006 0.00819472 0.99135 0 50.1711 GTEX-1QP67-1526-SM-E76P4 1 B1 2 pieces, ~50% target ovarian stroma, post menopausal atrophic changes (ensquared). rest is hilar vessel/connective tissues 6.2 Ovary Ovary 0000992 281 750 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993602 354372 0.969335 0.994876 0.797839 24891 1 76 0.00187557 278 0 1.03396e+08 0.0304076 684721 1.03929e+08 6.43523e+06 24934 5.15133e+07 0 0.171497 0.994876 0.79375 1.03396e+08 0.00261689 2.25822e+07 9.79494e+06 2.27094e+07 325 2.27069e+07 1.81129e+07 0.00224576 2.27084e+07 50.0016 0.00658838 0.996149 0 50.1405 GTEX-1QP67-1626-SM-EAZ3X 1 B1 6 pieces, moderate dermal fat; squamous epithelium is ~405-50 microns 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 431 600 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987329 284226 0.974477 0.988039 0.813957 24586 1 76 0.00208754 282 0 9.62847e+07 0.0252526 883610 9.74503e+07 8.46757e+06 24623 4.79872e+07 0 0.16052 0.988039 0.804221 9.62847e+07 0.00290313 2.11371e+07 8.97063e+06 2.13645e+07 284 2.12648e+07 1.64964e+07 0.00249504 2.13089e+07 50.0518 0.00906729 0.988748 0 50.2675 GTEX-1QP67-1726-SM-E8VOP 0 B1 2 pieces, trace vascular elements, rep delineated 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 431 600 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988668 801951 0.954536 0.989986 0.808029 22082 1 76 0.00180898 209 0 8.87701e+07 0.0451852 1.13444e+06 8.96681e+07 5.06455e+06 22104 4.42181e+07 0 0.146506 0.989986 0.799938 8.87701e+07 0.00250343 1.90853e+07 2.98148e+07 1.9407e+07 252 1.93519e+07 1.36423e+07 0.00215574 1.92745e+07 49.8998 0.0126515 0.991304 0 50.4178 GTEX-1QP67-1826-SM-DTX8D 0 B1 2 pieces, ~5% tendon/vascular elements, delineated 8.2 Muscle Muscle - Skeletal 0011907 431 600 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.99136 1.09145e+06 0.982258 0.993482 0.872289 19561 1 76 0.00178135 198 0 8.22173e+07 0.0175474 1.44575e+06 8.27567e+07 3.52818e+06 19573 4.08643e+07 0 0.10997 0.993482 0.866603 8.22173e+07 0.00222186 1.81938e+07 1.03548e+07 1.82124e+07 214 1.85218e+07 1.63641e+07 0.00200114 1.80372e+07 49.3373 0.0174699 0.995603 0 50.0256 GTEX-1QP67-2026-SM-E8VO7 0 B1 2 pieces, no significant atherosis or adherent fat 6.4 Blood Vessel Artery - Tibial 0007610 431 600 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.984289 449274 0.972989 0.985467 0.848622 21255 1 76 0.00163873 283 0 9.65938e+07 0.0266274 693641 9.80183e+07 4.92495e+06 21275 4.81093e+07 0 0.124367 0.985467 0.836289 9.65938e+07 0.00226374 2.07011e+07 9.18766e+06 2.09028e+07 295 2.07914e+07 1.88223e+07 0.00195086 2.09262e+07 50.1616 0.00707665 0.986645 0 50.2423 GTEX-1QP6S-0001-SM-DCXR3 B1 Blood Whole Blood 0013756 1035 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP6S-0001-SM-DLIQM B1 Blood Whole Blood 0013756 1035 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP6S-0126-SM-E9J4K 1 B1 2 pieces (fragmented); mature adipose tissue and fibrovascular component 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1249 581 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.99322 237102 0.977522 0.993769 0.793701 23114 1 76 0.0018714 278 0 8.73646e+07 0.0221499 611291 8.79124e+07 4.27913e+06 23146 4.35269e+07 0 0.183821 0.993769 0.788756 8.73646e+07 0.00251962 1.9353e+07 8.77841e+06 1.95225e+07 266 1.94368e+07 1.33053e+07 0.00219533 1.94853e+07 50.0623 0.00695341 0.994319 0 50.218 GTEX-1QP6S-0326-SM-DTXF7 1 B1 6 pieces; dermal cracks 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1253 577 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 EXCLUDE 0.993682 488647 0.977303 0.994518 0.808368 23606 1 76 0.00209136 172 0 7.75607e+07 0.0223544 274194 7.79882e+07 4.18968e+06 23636 3.86295e+07 0 0.168936 0.994518 0.803936 7.75607e+07 0.00251633 1.71518e+07 6.71253e+06 1.72095e+07 182 1.72702e+07 1.45335e+07 0.00230367 1.71553e+07 49.8332 0.00351584 0.995353 0 50.0839 GTEX-1QP6S-0426-SM-DTXG4 1 B1 2 pieces; <5% interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 1255 575 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995664 733839 0.984599 0.996375 0.881206 19384 1 76 0.00166597 200 0 9.86597e+07 0.015082 614851 9.90186e+07 4.71359e+06 19393 4.91765e+07 0 0.103393 0.996375 0.878012 9.86597e+07 0.00197848 2.14652e+07 7.69641e+06 2.15383e+07 251 2.16902e+07 2.30189e+07 0.00182211 2.13756e+07 49.6347 0.00620945 0.997086 0 50.085 GTEX-1QP6S-0526-SM-E9J4L 1 B1 3 pieces; external fat up to 1.7mm; trace to 25% internal fat (outlined) 6.2 Nerve Nerve - Tibial 0001323 1256 574 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.983757 410894 0.959556 0.984406 0.705588 25074 1 76 0.0020588 224 0 9.27307e+07 0.0401506 337190 9.41996e+07 4.78875e+06 25125 4.61841e+07 0 0.253968 0.984406 0.694585 9.27307e+07 0.00269913 2.02111e+07 1.20147e+07 2.04188e+07 221 2.03354e+07 1.26129e+07 0.00237876 2.03596e+07 50.0298 0.00357953 0.985055 0 50.2556 GTEX-1QP6S-0626-SM-E8VN4 1 B1 2 pieces; lumina open; rim of adherent adventitia 5.8 Blood Vessel Artery - Tibial 0007610 1258 572 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.97822 477693 0.969992 0.97934 0.815267 21153 1 76 0.00178105 174 0 8.05318e+07 0.0295898 429343 8.22306e+07 4.36021e+06 21175 4.00759e+07 0 0.154725 0.97934 0.798424 8.05318e+07 0.00249181 1.70395e+07 1.13187e+07 1.7287e+07 192 1.71665e+07 1.55301e+07 0.00213602 1.72596e+07 50.1353 0.00522121 0.98046 0 50.3604 GTEX-1QP6S-0726-SM-E76QS 2 B1 2 pieces; glandular hyperplasia and generalized sloughing of glandular epithelium; periglandular lymphocytic infiltrates (arrows);fibromuscular stroma; focal calcification (outlined) 5.8 Prostate Prostate 0002367 1259 571 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991859 170987 0.966373 0.993134 0.770676 28101 1 76 0.00200087 168 0 7.75887e+07 0.0332692 696035 7.81251e+07 4.52721e+06 28138 3.86388e+07 0 0.195696 0.993134 0.765385 7.75887e+07 0.00283594 1.69384e+07 7.11235e+06 1.7035e+07 185 1.70395e+07 1.25212e+07 0.00241787 1.7028e+07 49.9832 0.00890924 0.994409 0 50.1422 GTEX-1QP6S-0826-SM-E6CPP 1 B1 2 pieces; spermatogenesis present; congestion; 5.9 Testis Testis 0000473 1262 568 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99034 493789 0.936264 0.991979 0.735532 31775 1 76 0.00235606 147 0 7.53237e+07 0.063445 785302 7.59328e+07 1.33548e+07 31836 3.74606e+07 0 0.200732 0.991979 0.729632 7.53237e+07 0.00319981 1.60983e+07 9.48824e+06 1.59272e+07 159 1.59947e+07 1.16581e+07 0.00277724 1.61425e+07 50.23 0.0103421 0.993618 0 49.7329 GTEX-1QP6S-1026-SM-DTXFW 1 B1 2 pieces; fibromuscular tissue and ~50% internal/external fat (outlined) 5.6 Heart Heart - Atrial Appendage 0006631 1265 565 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99214 739112 0.979925 0.993393 0.815713 23810 1 76 0.00190229 369 0 1.13363e+08 0.0198865 3.70473e+06 1.14117e+08 6.25721e+06 23838 5.64084e+07 0 0.164212 0.993393 0.810324 1.13363e+08 0.00255599 2.50001e+07 2.18281e+07 2.51453e+07 405 2.5379e+07 1.19171e+07 0.00222873 2.48834e+07 49.507 0.0324644 0.994647 0 50.1447 GTEX-1QP6S-1326-SM-DPRZ8 1 B1 2 pieces; marked congestion; mild to moderate fatty degeneration 6.6 Liver Liver 0001114 1273 557 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994388 247868 0.977066 0.995308 0.843907 20346 1 76 0.00187708 123 0 5.92809e+07 0.0227427 1.20516e+06 5.95604e+07 3.3583e+06 20358 2.95396e+07 0 0.13316 0.995308 0.839947 5.92809e+07 0.00260247 1.2915e+07 6.88047e+06 1.31309e+07 149 1.3086e+07 1.05086e+07 0.00223944 1.30071e+07 49.8488 0.0202342 0.996228 0 50.4144 GTEX-1QP6S-1526-SM-EXUSG 1 B1 6 pieces; mild to moderate cortical autolysis; arterio and arteriolonephrosclerosis with hyalinized glomeruli (rep arrows); interstitial fibrosis with scarring and lymphocytic infiltrates; scattered ductal calcifications (outlined); congestion 5.5 Kidney Kidney - Cortex 0001225 1277 553 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.983566 203798 0.976554 0.984438 0.870636 22196 1 76 0.00161092 158 0 5.98026e+07 0.0232381 3.08434e+06 6.0748e+07 2.31151e+06 22208 2.97825e+07 0 0.105918 0.984438 0.857088 5.98026e+07 0.00221148 1.3271e+07 6.2599e+06 1.3605e+07 199 1.35154e+07 6.6914e+06 0.00191093 1.34057e+07 49.7962 0.0507728 0.98531 0 50.6214 GTEX-1QP6S-1626-SM-EVYC5 1 B1 2 pieces (fragmented); lobulated mature adipose tissue with mesothelial outlines (rep arrowed); 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1278 552 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.984341 244789 0.974098 0.984915 0.761704 23363 1 76 0.00210877 152 0 7.18724e+07 0.0255652 412073 7.29732e+07 3.43404e+06 23391 3.57987e+07 0 0.212393 0.984915 0.750214 7.18724e+07 0.00328018 1.58541e+07 8.55378e+06 1.60554e+07 172 1.59812e+07 1.09148e+07 0.00269414 1.59733e+07 49.9875 0.00564691 0.985489 0 50.3154 GTEX-1QP6S-2526-SM-DTX9Z 1 B1 2 pieces;15% and 5% fat mostly perivascular (outlined); couple of empty spaces (arrows) 6.3 Thyroid Thyroid 0002046 1297 533 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.98898 1.00003e+06 0.972881 0.990859 0.750951 23222 1 76 0.00210815 134 0 6.27863e+07 0.0267768 345661 6.33655e+07 3.13994e+06 23253 3.11646e+07 0 0.221931 0.990859 0.744086 6.27863e+07 0.00250603 1.39854e+07 5.79703e+06 1.38111e+07 146 1.42113e+07 1.01849e+07 0.00230672 1.36974e+07 49.0793 0.00545504 0.992739 0 49.6865 GTEX-1QP6S-2926-SM-DTXF8 1 B1 4 fragmented pieces; tiny remnants of meninges with calcifications (outlined) 6.6 Brain Brain - Cortex 0001870 1357 473 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993008 679230 0.96254 0.994101 0.809506 24232 1 76 0.00207936 375 0 1.00865e+08 0.0371647 3.35398e+06 1.01464e+08 5.55851e+06 24262 5.02299e+07 0 0.153034 0.994101 0.804731 1.00865e+08 0.00250737 2.21212e+07 1.16222e+07 2.24847e+07 362 2.24625e+07 1.25651e+07 0.00229313 2.22424e+07 49.7538 0.0330559 0.995195 0 50.4075 GTEX-1QP6S-3026-SM-EAZ4N 1 B1 4 pieces; Purkinje cells present; tiny remnants of meninges (arrows) 6.4 Brain Brain - Cerebellum 0002037 1358 472 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991098 806864 0.944074 0.992008 0.721363 25930 1 76 0.00227022 374 0 1.33668e+08 0.0555507 1.59438e+06 1.34745e+08 1.08371e+07 25987 6.65771e+07 0 0.22271 0.992008 0.715598 1.33668e+08 0.00315716 2.86994e+07 2.24521e+07 2.89795e+07 349 2.89751e+07 1.62513e+07 0.00271328 2.88181e+07 49.8642 0.0118326 0.992919 0 50.2428 GTEX-1QP6S-3126-SM-DPRZY 1 B1 1 piece: 70% adenohypophysis and 30% neurohypophysis 6.6 Pituitary Pituitary 0000007 1360 470 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994296 240230 0.962986 0.995037 0.762429 23838 1 76 0.00189928 111 0 5.13945e+07 0.0367948 311602 5.16508e+07 2.55944e+06 23865 2.55992e+07 0 0.200557 0.995037 0.758646 5.13945e+07 0.00277423 1.05122e+07 5.00413e+06 1.06079e+07 120 1.0579e+07 8.02574e+06 0.00233643 1.05767e+07 49.9946 0.00603286 0.995779 0 50.2265 GTEX-1QP9N-0004-SM-DCXS1 B1 Blood Whole Blood 0013756 -90 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QP9N-0004-SM-DLIP4 B1 Blood Whole Blood 0013756 -90 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QP9N-0005-SM-CY8H9 B1 9.1 Blood Whole Blood 0013756 -90 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.987722 1.09314e+06 0.950997 0.989903 0.78649 19807 1 76 0.00483828 138 0 9.15261e+07 0.048498 231557 9.24597e+07 1.1434e+07 19822 4.55131e+07 0 0.164506 0.989903 0.778549 9.15261e+07 0.0078605 1.99262e+07 5.96444e+07 2.01057e+07 160 2.01879e+07 1.86384e+07 0.00634606 2.00614e+07 49.8428 0.00250441 0.992084 0 50.2242 GTEX-1QP9N-0126-SM-DPRZS 1 B1 2 pieces; no lesions; well dissected except for a 1mm fibrofatty focus on edge 6.8 Thyroid Thyroid 0002046 180 948 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993881 348828 0.966798 0.99461 0.751991 23806 1 76 0.00197912 158 0 7.53625e+07 0.0329457 293963 7.57709e+07 4.26246e+06 23845 3.7562e+07 0 0.214807 0.99461 0.747938 7.53625e+07 0.00253969 1.65228e+07 6.7011e+06 1.66208e+07 167 1.66143e+07 1.20595e+07 0.0022592 1.65763e+07 49.9428 0.00387963 0.995339 0 50.1479 GTEX-1QP9N-0226-SM-E9J4A 0 B1 6 pieces; well dissected; no lesions 7.9 Blood Vessel Artery - Aorta 0001496 185 943 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.989303 365408 0.974897 0.990001 0.83844 21650 1 76 0.00171406 215 0 8.75302e+07 0.0247291 268043 8.84143e+07 4.12701e+06 21672 4.36217e+07 0 0.136457 0.990001 0.830056 8.75302e+07 0.0025006 1.89715e+07 5.58697e+06 1.91232e+07 229 1.90352e+07 1.691e+07 0.00210705 1.9125e+07 50.1177 0.00303167 0.990699 0 50.1992 GTEX-1QP9N-0426-SM-DTXFT 1 B1 2 pieces; 5 & 10% fibrous content 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 199 929 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995435 422422 0.976107 0.996016 0.839345 22682 1 76 0.00199528 206 0 7.49902e+07 0.0236102 701507 7.52901e+07 3.9932e+06 22697 3.73821e+07 0 0.136762 0.996016 0.836001 7.49902e+07 0.00218959 1.64357e+07 6.22432e+06 1.65697e+07 205 1.65796e+07 1.30142e+07 0.00209238 1.64659e+07 49.828 0.00931739 0.996597 0 50.203 GTEX-1QP9N-0526-SM-DTX9P 0 B1 6 pieces; 10% fibrofatty stromal content 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 202 926 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991802 749433 0.976208 0.993704 0.826407 22174 1 76 0.00187672 172 0 7.5776e+07 0.0235272 587508 7.62562e+07 3.36262e+06 22201 3.76888e+07 0 0.1498 0.993704 0.821204 7.5776e+07 0.00232574 1.65304e+07 5.64244e+06 1.65414e+07 187 1.66877e+07 1.33718e+07 0.0021008 1.65166e+07 49.7424 0.0077044 0.995605 0 50.0166 GTEX-1QP9N-0826-SM-DTX9O 0 B1 6 pieces; well dissected muscularis propria 6.7 Colon Colon - Sigmoid 0001159 225 903 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991362 690739 0.973633 0.993404 0.813498 22606 1 76 0.00197468 162 0 7.35226e+07 0.0261224 676405 7.40109e+07 3.42672e+06 22629 3.65628e+07 0 0.160136 0.993404 0.808132 7.35226e+07 0.00235988 1.5926e+07 5.81226e+06 1.59229e+07 176 1.60927e+07 1.27022e+07 0.00216688 1.58937e+07 49.6889 0.00913927 0.995445 0 49.9951 GTEX-1QP9N-0926-SM-E9U5S 0 B1 6 pieces; esophagus mucosa, not muscularis; all have prominent submucosal glands occupying 10% 8.6 Esophagus Esophagus - Mucosa 0006920 227 901 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992327 414704 0.978651 0.993183 0.848949 22825 1 76 0.00171532 283 0 9.85636e+07 0.0210138 583676 9.92401e+07 3.42809e+06 22846 4.91399e+07 0 0.129702 0.993183 0.843162 9.85636e+07 0.00250044 2.22475e+07 1.07813e+07 2.24239e+07 298 2.23976e+07 2.09789e+07 0.00210754 2.23542e+07 49.9516 0.00588145 0.994039 0 50.1975 GTEX-1QP9N-1026-SM-E6CPX 1 B1 6 pieces; full thickness with focal excess of fatty adventitia 6.5 Colon Colon - Transverse 0001157 233 895 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.98995 491444 0.973448 0.992257 0.814332 23226 1 76 0.00263426 190 0 7.82475e+07 0.0256973 2.06592e+06 7.88581e+07 1.25553e+07 23254 3.88737e+07 0 0.159116 0.992257 0.808026 7.82475e+07 0.00401585 1.72867e+07 1.00623e+07 1.76018e+07 205 1.75466e+07 1.05367e+07 0.00332345 1.74853e+07 49.9125 0.0261979 0.994563 0 50.4516 GTEX-1QP9N-1226-SM-E76QN 0 B1 6 pieces; several hair follicles in each piece; well trimmed; <10% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 262 866 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992777 415131 0.973392 0.994099 0.838729 23515 1 76 0.00188015 287 0 9.53311e+07 0.0264033 1.06753e+06 9.5897e+07 6.02559e+06 23538 4.74957e+07 0 0.134663 0.994099 0.833779 9.53311e+07 0.00272957 2.09852e+07 1.15584e+07 2.11646e+07 295 2.11493e+07 1.75549e+07 0.00230429 2.11229e+07 49.9689 0.011132 0.995421 0 50.2128 GTEX-1QP9N-1326-SM-DPRZN 1 B1 2 pieces; active spermatogenesis; no lesions 6.8 Testis Testis 0000473 266 862 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993217 320980 0.939305 0.99406 0.758846 31677 1 76 0.00194136 144 0 6.95864e+07 0.0604022 881030 7.00022e+07 3.50817e+06 31726 3.46799e+07 0 0.180459 0.99406 0.754339 6.95864e+07 0.00267129 1.47084e+07 8.02658e+06 1.47982e+07 149 1.48083e+07 1.17917e+07 0.00230602 1.47464e+07 49.8952 0.0125857 0.994903 0 50.1523 GTEX-1QP9N-1426-SM-DTXFL 0 B1 6 pieces; 10% dermal fat with appendages; well trimmed 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 277 851 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993237 567646 0.972507 0.994177 0.827618 23385 1 76 0.00207282 298 0 9.88941e+07 0.0272787 1.2474e+06 9.94733e+07 5.31317e+06 23413 4.92765e+07 0 0.144889 0.994177 0.822799 9.88941e+07 0.00241431 2.16746e+07 1.34057e+07 2.18891e+07 329 2.19299e+07 1.69875e+07 0.0022434 2.17266e+07 49.7672 0.0125401 0.995118 0 50.2461 GTEX-1QP9N-1526-SM-DTXFK 0 B1 2 pieces; sweat glands and ducts embedded in fibrous stroma comprise 10% 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 280 848 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994385 386110 0.97691 0.995118 0.834591 23549 1 76 0.00194983 279 0 8.84513e+07 0.0228159 694496 8.88853e+07 4.32278e+06 23582 4.40858e+07 0 0.142319 0.995118 0.830516 8.84513e+07 0.00242717 1.94753e+07 8.49118e+06 1.96094e+07 267 1.96384e+07 1.6095e+07 0.00218833 1.9508e+07 49.8334 0.0078134 0.995851 0 50.1715 GTEX-1QP9N-1626-SM-DTXFJ 0 B1 2 pieces; well dissected; <10% fat content 6.1 Nerve Nerve - Tibial 0001323 283 845 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993513 314493 0.967239 0.994178 0.759369 24186 1 76 0.00211523 221 0 8.70777e+07 0.0324841 453395 8.75877e+07 4.4668e+06 24227 4.34091e+07 0 0.20787 0.994178 0.754948 8.70777e+07 0.0024265 1.91158e+07 7.05433e+06 1.92268e+07 225 1.92121e+07 1.36942e+07 0.00227076 1.91867e+07 49.967 0.00517647 0.994843 0 50.1448 GTEX-1QP9N-1726-SM-E8VMM 0 B1 2 pieces; well dissected; no lesions 7.9 Blood Vessel Artery - Tibial 0007610 285 843 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.990327 457033 0.975121 0.991356 0.845914 20800 1 76 0.00160445 276 0 9.30273e+07 0.024474 435777 9.38384e+07 4.59775e+06 20818 4.63471e+07 0 0.129207 0.991356 0.838602 9.30273e+07 0.00214254 1.99898e+07 5.86575e+06 2.01224e+07 270 2.00433e+07 1.80108e+07 0.00187321 2.0162e+07 50.1476 0.00464391 0.992386 0 50.1653 GTEX-1QP9N-1826-SM-E8VMP 0 B1 2 pieces; fibro fatty tissue without obvious mammary ducts 6 Breast Breast - Mammary Tissue 0008367 288 840 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986188 297489 0.978652 0.987372 0.84853 21431 1 76 0.00174612 199 0 7.56093e+07 0.0210772 884268 7.65764e+07 3.96396e+06 21447 3.76748e+07 0 0.130122 0.987372 0.837814 7.56093e+07 0.00236486 1.66749e+07 7.01397e+06 1.68942e+07 213 1.67975e+07 1.22549e+07 0.00205512 1.68573e+07 50.0888 0.0115475 0.988555 0 50.3267 GTEX-1QP9N-1926-SM-E6CPY 0 B1 3 pieces; <5% internal fat 7.9 Muscle Muscle - Skeletal 0011907 290 838 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992285 534440 0.985303 0.9943 0.888682 18702 1 76 0.00215893 161 0 7.60318e+07 0.0144967 1.34905e+06 7.64676e+07 1.30378e+07 18708 3.78348e+07 0 0.0966209 0.9943 0.883616 7.60318e+07 0.00310709 1.69537e+07 9.49295e+06 1.70228e+07 191 1.70184e+07 1.49799e+07 0.00263205 1.70687e+07 50.0739 0.0176422 0.996316 0 50.1016 GTEX-1QP9N-2026-SM-DPRZT 0 B1 1 piece; very well dissected gland 7.9 Salivary Gland Minor Salivary Gland 0006330 310 818 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.991567 455276 0.977488 0.992474 0.811855 23704 1 76 0.00230929 213 0 8.82287e+07 0.021316 302031 8.88978e+07 5.00409e+06 23730 4.39186e+07 0 0.165633 0.992474 0.805745 8.82287e+07 0.00292042 1.99228e+07 1.83146e+07 2.02272e+07 254 2.03012e+07 1.62167e+07 0.00261457 1.99266e+07 49.5344 0.00339751 0.99338 0 50.379 GTEX-1QPFJ-0004-SM-DCXR4 B1 Blood Whole Blood 0013756 -67 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QPFJ-0004-SM-DLIQN B1 Blood Whole Blood 0013756 -67 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QPFJ-0006-SM-CY8HB B1 7.6 Blood Whole Blood 0013756 -67 BP-69363 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-9769 09/18/2016 TruSeq.v1 RNASEQ 0.976185 826370 0.96839 0.978646 0.82142 18678 1 76 0.00469795 120 0 8.74091e+07 0.0306851 433805 8.93164e+07 1.08198e+07 18686 4.34183e+07 0 0.14697 0.978646 0.803879 8.74091e+07 0.00854173 1.99124e+07 9.58116e+07 2.00662e+07 140 2.01143e+07 2.17539e+07 0.00661501 2.01102e+07 49.9949 0.00485695 0.981107 0 50.1923 GTEX-1QPFJ-0126-SM-E9J4B 0 B1 2 pieces; 10% fibrous content 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 347 546 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985816 376936 0.973474 0.986661 0.791363 23468 1 76 0.00188592 210 0 9.18724e+07 0.0262172 260548 9.31144e+07 4.59245e+06 23505 4.57817e+07 0 0.182111 0.986661 0.780807 9.18724e+07 0.0024681 2.01707e+07 8.86103e+06 2.03153e+07 254 2.02531e+07 1.53436e+07 0.00217676 2.03127e+07 50.0734 0.00279815 0.987506 0 50.1786 GTEX-1QPFJ-0226-SM-E76PB 1 B1 6 pieces; 10-20% dermal fat 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 349 544 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993401 485408 0.97509 0.994711 0.783783 23623 1 76 0.00190106 305 0 9.81836e+07 0.0246911 254565 9.87056e+07 6.21074e+06 23658 4.89115e+07 0 0.191307 0.994711 0.779638 9.81836e+07 0.00268587 2.1468e+07 9.54636e+06 2.15692e+07 281 2.16676e+07 1.64966e+07 0.00229295 2.14893e+07 49.7934 0.00257903 0.996022 0 50.1175 GTEX-1QPFJ-0326-SM-E8VO2 1 B1 2 pieces plus fragments; 10% internal fat content 5.5 Muscle Muscle - Skeletal 0011907 358 535 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.987311 484953 0.975205 0.988612 0.820897 21796 1 76 0.00150602 286 0 9.02899e+07 0.0246237 1.03182e+06 9.13299e+07 4.42896e+06 21824 4.49966e+07 0 0.154308 0.988612 0.811549 9.02899e+07 0.00215366 1.98933e+07 9.60506e+06 2.01305e+07 271 2.00735e+07 1.5095e+07 0.00182942 2.00574e+07 49.9798 0.0112978 0.989914 0 50.2964 GTEX-1QPFJ-0426-SM-E8VNC 0 B1 1 piece; artery not nerve; well trimmed 7.8 Blood Vessel Artery - Tibial 0007610 363 530 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.99027 357183 0.974967 0.991378 0.78841 21311 1 76 0.00175955 153 0 6.9336e+07 0.024609 116038 6.9939e+07 3.50192e+06 21342 3.45257e+07 0 0.186556 0.991378 0.781613 6.9336e+07 0.00231517 1.50515e+07 4.31081e+06 1.51123e+07 157 1.50979e+07 1.28818e+07 0.00203705 1.51411e+07 50.0715 0.00165913 0.992487 0 50.1008 GTEX-1QPFJ-0526-SM-DTXDR 0 B1 1 piece; nerve not artery; 20% internal fat 5.8 Nerve Nerve - Tibial 0001323 362 531 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.992854 539959 0.969075 0.993936 0.734357 24372 1 76 0.00203673 208 0 8.6693e+07 0.0306763 232238 8.72219e+07 4.25305e+06 24421 4.31792e+07 0 0.234717 0.993936 0.729904 8.6693e+07 0.00266773 1.90919e+07 7.76442e+06 1.9134e+07 203 1.92066e+07 1.32414e+07 0.00235189 1.91094e+07 49.8732 0.00266261 0.995018 0 50.0551 GTEX-1QPFJ-0626-SM-DTX7Y 1 B1 2 pieces; no lesions; generally well dissected; some tissue fractures 6.7 Thyroid Thyroid 0002046 366 527 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992043 532524 0.96617 0.993916 0.732999 23700 1 76 0.00189413 142 0 7.43131e+07 0.033565 167720 7.47679e+07 3.37521e+06 23738 3.69793e+07 0 0.23317 0.993916 0.72854 7.43131e+07 0.00221947 1.62814e+07 6.47669e+06 1.62815e+07 162 1.6422e+07 1.17365e+07 0.0020565 1.62675e+07 49.7637 0.00224321 0.995789 0 50 GTEX-1QPFJ-0726-SM-DTXDS 0 B1 6 pieces; no plaques; well dissected 7.8 Blood Vessel Artery - Aorta 0001496 369 524 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99451 691458 0.977241 0.995245 0.835577 22426 1 76 0.00179701 281 0 1.0317e+08 0.0223819 233488 1.03663e+08 4.87398e+06 22456 5.14054e+07 0 0.141664 0.995245 0.831604 1.0317e+08 0.00245339 2.2441e+07 7.24684e+06 2.25077e+07 327 2.25956e+07 2.04742e+07 0.00212495 2.2432e+07 49.8184 0.00225238 0.99598 0 50.0742 GTEX-1QPFJ-0826-SM-EYYXL 0 B1 2 pieces; no plaques; widely patent; perivascular fat up to 1.8mm thick 6.6 Blood Vessel Artery - Coronary 0001621 375 518 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98438 118880 0.972521 0.987498 0.800891 21445 1 76 0.00211414 131 0 6.36676e+07 0.0271807 250102 6.44736e+07 2.4677e+06 21464 3.16532e+07 0 0.17163 0.987498 0.790878 6.36676e+07 0.00368174 1.36558e+07 4.19311e+06 1.38011e+07 150 1.37927e+07 1.05327e+07 0.00289546 1.38516e+07 50.1065 0.00387914 0.990616 0 50.2647 GTEX-1QPFJ-0926-SM-EVR3K 1 B1 2 pieces; 10% internal fat 8.9 Heart Heart - Atrial Appendage 0006631 377 516 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.991719 307436 0.977259 0.993492 0.819346 23387 1 76 0.00197303 272 0 1.12516e+08 0.0224468 1.04839e+06 1.13253e+08 8.05148e+06 23417 5.60463e+07 0 0.157913 0.993492 0.814014 1.12516e+08 0.00299577 2.37522e+07 1.18726e+07 2.40321e+07 304 2.39638e+07 2.10907e+07 0.00248349 2.39879e+07 50.0252 0.00925705 0.995265 0 50.2929 GTEX-1QPFJ-1026-SM-E6CR6 1 B1 2 pieces; artery bisects smaller piece (arrow); no lesions 8.5 Heart Heart - Left Ventricle 0006566 379 514 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992662 707883 0.982417 0.99461 0.844474 22027 1 76 0.00205659 268 0 1.0723e+08 0.0173116 1.46486e+06 1.07811e+08 1.77413e+07 22052 5.33702e+07 0 0.137943 0.99461 0.839922 1.0723e+08 0.00306414 2.35618e+07 1.41467e+07 2.35595e+07 318 2.35423e+07 2.00770e+07 0.00255938 2.37132e+07 50.1808 0.0135873 0.996559 0 49.9976 GTEX-1QPFJ-1126-SM-E9U5V 1 B1 2 pieces; extensive panlobular macrovesicular steatosis; fibrous tissue on edge of 1 piece occupies 20% [outlined] 7.8 Liver Liver 0001114 382 511 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.993833 425212 0.982375 0.994682 0.836902 21363 1 76 0.00166459 271 0 1.06455e+08 0.0174037 322549 1.07024e+08 3.65105e+06 21384 5.30889e+07 0 0.145474 0.994682 0.832451 1.06455e+08 0.00238037 2.34999e+07 1.26594e+07 2.36264e+07 298 2.3629e+07 2.25947e+07 0.00202217 2.35796e+07 49.9476 0.00301379 0.995532 0 50.1341 GTEX-1QPFJ-1226-SM-EAZ3M 1 B1 4 pieces; slight sloughing of surface on 2 pieces; slightly edematous stroma; abundant submucosal fibrous stroma, without glands 9.8 Esophagus Esophagus - Mucosa 0006920 388 505 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991301 510546 0.977757 0.992153 0.830488 23499 1 76 0.00201159 382 0 1.13745e+08 0.0218915 462704 1.14645e+08 9.68586e+06 23529 5.67006e+07 0 0.147269 0.992153 0.823972 1.13745e+08 0.00298897 2.54643e+07 1.29724e+07 2.5645e+07 337 2.56076e+07 2.40636e+07 0.00249986 2.55996e+07 49.9922 0.00403598 0.993006 0 50.1767 GTEX-1QPFJ-1426-SM-DTX7W 1 B1 6 pieces; 4 pieces well dissected muscularis, 2 have 20% fibrofatty adventitia with prominent nerves 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 392 501 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992885 502402 0.979782 0.994744 0.848138 21292 1 76 0.00173399 228 0 8.34494e+07 0.019879 410274 8.38903e+07 3.57967e+06 21312 4.1548e+07 0 0.131644 0.994744 0.84368 8.34494e+07 0.00207652 1.80294e+07 6.25315e+06 1.81943e+07 224 1.82325e+07 1.64703e+07 0.00190494 1.81295e+07 49.8584 0.0048906 0.996603 0 50.2277 GTEX-1QPFJ-1526-SM-DPRXT 1 B1 6 pieces; 5 of 6 have full thickness wall, 1 has no muscularis; submucosa edematous 7.1 Stomach Stomach 0000945 395 498 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.988998 267100 0.981348 0.990197 0.827778 22007 1 76 0.001854 281 0 7.31623e+07 0.0183769 235125 7.38866e+07 3.76908e+06 22026 3.64275e+07 0 0.15357 0.990197 0.819663 7.31623e+07 0.00287867 1.68532e+07 7.24787e+07 1.70016e+07 201 1.70463e+07 2.00022e+07 0.00236572 1.68947e+07 49.7767 0.00318224 0.991396 0 50.2192 GTEX-1QPFJ-1626-SM-DTX7X 0 B1 6 pieces; all full thickness with no lesions in epithelium 6.5 Vagina Vagina 0000996 397 496 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990657 785138 0.971505 0.992749 0.762972 22802 1 76 0.00202351 131 0 6.32703e+07 0.028224 95207 6.37325e+07 2.92217e+06 22833 3.14505e+07 0 0.208533 0.992749 0.75744 6.32703e+07 0.00254248 1.3762e+07 5.05531e+06 1.38086e+07 146 1.39157e+07 1.09213e+07 0.00228245 1.37781e+07 49.7515 0.00149385 0.99484 0 50.0846 GTEX-1QPFJ-1726-SM-EXOJU 1 B1 2 pieces; several large follicular cysts 7.8 Ovary Ovary 0000992 398 495 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989566 376971 0.970144 0.991559 0.748591 23776 1 76 0.00203123 216 0 9.56449e+07 0.0295668 123742 9.64591e+07 5.71776e+06 23826 4.75974e+07 0 0.221553 0.991559 0.742273 9.56449e+07 0.00334928 2.10868e+07 9.06034e+06 2.12156e+07 218 2.12346e+07 1.75823e+07 0.00268893 2.12486e+07 50.0165 0.00128284 0.993553 0 50.1522 GTEX-1QPFJ-1826-SM-EWRMS 0 B1 2 pieces; no endometrium (in these cuts); 1 piece is 40% endocervix (arrowed) 7 Uterus Uterus 0000995 402 491 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 EXCLUDE 0.98473 288984 0.963115 0.988206 0.742735 25092 1 76 0.00253492 172 0 8.51322e+07 0.0366278 137142 8.61483e+07 6.32355e+06 25144 4.23107e+07 0 0.22038 0.988206 0.733975 8.51322e+07 0.00339521 1.85145e+07 8.4149e+06 1.87361e+07 191 1.87825e+07 1.3002e+07 0.00295349 1.8737e+07 49.9393 0.00159193 0.991681 0 50.2975 GTEX-1QPFJ-1926-SM-EVYBD 0 B1 6 pieces; well trimmed; <5% dermal fat 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 404 489 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991627 431015 0.97489 0.992328 0.798929 23452 1 76 0.00189725 304 0 1.08361e+08 0.0248895 357264 1.09199e+08 4.67362e+06 23482 5.40311e+07 0 0.175961 0.992328 0.7928 1.08361e+08 0.00283319 2.37416e+07 1.09594e+07 2.39977e+07 328 2.39545e+07 1.9326e+07 0.00236489 2.3862e+07 49.9032 0.00327168 0.993029 0 50.2682 GTEX-1QPFJ-2026-SM-EVYBE 1 B1 2 pieces; several atrophic ducts in fibrofatty tissue 7.9 Breast Breast - Mammary Tissue 0008367 410 483 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992801 396678 0.97729 0.993378 0.819079 24309 1 76 0.00189444 281 0 1.03435e+08 0.0223156 189425 1.04125e+08 4.5113e+06 24344 5.15767e+07 0 0.158212 0.993378 0.813655 1.03435e+08 0.00287431 2.27551e+07 9.2113e+06 2.30774e+07 302 2.30313e+07 2.0779e+07 0.00238409 2.28594e+07 49.8128 0.00181921 0.993956 0 50.3517 GTEX-1QPFJ-2126-SM-EXOJV 0 B1 2 pieces; 5% fibrovascular content 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 416 477 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98631 382432 0.975556 0.988308 0.817314 24355 1 76 0.00220076 277 0 9.96539e+07 0.023782 315427 1.00833e+08 5.85806e+06 24391 4.95574e+07 0 0.158243 0.988308 0.807757 9.96539e+07 0.00362855 2.19132e+07 8.91185e+06 2.20663e+07 290 2.21112e+07 1.81487e+07 0.00291321 2.20563e+07 49.9379 0.00312822 0.990305 0 50.174 GTEX-1QPFJ-2226-SM-EXOJW 2 B1 2 pieces; islets are only slightly autolyzed; 40% fat content 8 Pancreas Pancreas 0001150 420 473 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989659 288668 0.978315 0.991751 0.838509 21921 1 76 0.00209562 124 0 8.15521e+07 0.0214427 136262 8.22304e+07 4.94641e+06 21943 4.05859e+07 0 0.139806 0.991751 0.831592 8.15521e+07 0.00352497 1.85805e+07 1.54414e+07 1.88131e+07 137 1.87865e+07 2.31193e+07 0.00280879 1.87712e+07 49.9797 0.00165708 0.993843 0 50.311 GTEX-1QPFJ-2326-SM-E6CR7 2 B1 6 pieces; mucosa moderate autolysis, muscularis slight autolysis; 1 has no mucosa 7.8 Colon Colon - Transverse 0001157 422 471 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99182 581923 0.975475 0.993832 0.803971 24720 1 76 0.00229347 222 0 9.15834e+07 0.024123 441262 9.21517e+07 1.61203e+07 24758 4.55732e+07 0 0.171504 0.993832 0.799012 9.15834e+07 0.00329739 2.04532e+07 9.98074e+06 2.03249e+07 220 2.04098e+07 1.74791e+07 0.00279441 2.0536e+07 50.1542 0.00478843 0.995845 0 49.8427 GTEX-1QPFJ-2426-SM-EVR3L 1 B1 6 pieces; generally well dissected; 1 has 1mm fibrofatty adventitia 8.2 Colon Colon - Sigmoid 0001159 426 467 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.99049 256904 0.976965 0.992232 0.816548 23692 1 76 0.00210127 288 0 1.13709e+08 0.0227321 541139 1.146e+08 8.7615e+06 23729 5.66245e+07 0 0.160417 0.992232 0.810205 1.13709e+08 0.0031733 2.46185e+07 9.81997e+06 2.48629e+07 317 2.4798e+07 2.16523e+07 0.00263634 2.48643e+07 50.0668 0.004722 0.993974 0 50.2469 GTEX-1QPFJ-2526-SM-EXOJX 1 B1 2 pieces; well preserved cortex; 20 & 30% adherent fat 7.7 Adrenal Gland Adrenal Gland 0002369 434 459 BP-81757 RNA Extraction from Paxgene-derived Lysate Plate Based 12/21/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98591 205551 0.981574 0.987912 0.849601 22253 1 76 0.00188347 369 0 8.96027e+07 0.0182065 2.62593e+06 9.06992e+07 5.19085e+06 22275 4.45992e+07 0 0.131972 0.987912 0.839331 8.96027e+07 0.00303735 1.98754e+07 1.09556e+07 2.02142e+07 342 2.00639e+07 1.02507e+07 0.00245924 2.01731e+07 50.1358 0.0289521 0.989913 0 50.4225 GTEX-1QPFJ-2626-SM-DPRZU 1 B1 6 pieces; lymphoid-rich mucosa on all pieces comprise 80% of area; glands partially sloughed 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 432 461 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992813 320797 0.964912 0.993772 0.734969 25021 1 76 0.00218131 166 0 7.98185e+07 0.0344716 252699 8.03187e+07 4.48488e+06 25062 3.97574e+07 0 0.229943 0.993772 0.730392 7.98185e+07 0.00299837 1.7588e+07 8.60592e+06 1.76674e+07 170 1.76806e+07 1.33747e+07 0.00258944 1.76456e+07 49.9505 0.0031462 0.994731 0 50.1127 GTEX-1QW4Y-0003-SM-DCXR5 B1 Blood Whole Blood 0013756 -35 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1QW4Y-0003-SM-DLIQP B1 Blood Whole Blood 0013756 -35 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1QW4Y-0005-SM-DO93W B1 8 Blood Whole Blood 0013756 -35 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.9902 727876 0.96811 0.991065 0.817184 18581 1 76 0.00214322 137 0 8.32808e+07 0.031465 201281 8.40316e+07 5.02028e+06 18590 4.1469e+07 0 0.150927 0.991065 0.809882 8.32808e+07 0.00267455 1.86914e+07 6.08051e+07 1.88617e+07 161 1.88819e+07 1.85907e+07 0.00240865 1.87427e+07 49.8151 0.0023953 0.99193 0 50.2268 GTEX-1QW4Y-0126-SM-DPRZQ 1 B1 2 pieces, no abnormalities 6.3 Spleen Spleen 0002106 447 801 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993955 213568 0.965936 0.994749 0.799327 22512 1 76 0.00216318 120 0 5.29862e+07 0.033252 297154 5.32659e+07 3.20266e+06 22532 2.63896e+07 0 0.16661 0.994749 0.795129 5.29862e+07 0.00279046 1.16379e+07 6.96632e+06 1.17823e+07 129 1.17345e+07 8.68479e+06 0.00247657 1.17241e+07 49.9779 0.00557869 0.995543 0 50.3082 GTEX-1QW4Y-0226-SM-EAZ3U 1 B1 2 pieces, prominent Hashimoto thyroiditis with regressive changes; rep lymphoid aggregates delineated 7 Thyroid Thyroid 0002046 452 796 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986628 286787 0.960059 0.987341 0.724512 25816 1 76 0.00264676 165 0 8.58687e+07 0.0376759 311404 8.69697e+07 6.97714e+06 25868 4.26991e+07 0 0.235547 0.987341 0.715341 8.58687e+07 0.00342456 1.88529e+07 1.35725e+07 1.89408e+07 184 1.89198e+07 1.28989e+07 0.00303538 1.89345e+07 50.0194 0.0035806 0.988055 0 50.1163 GTEX-1QW4Y-0326-SM-E8VOT 0 B1 6 pieces, atherosis up to ~0.3mm 6.6 Blood Vessel Artery - Aorta 0001496 454 794 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.984678 462424 0.975756 0.98602 0.833829 23232 1 76 0.00182239 214 0 8.89863e+07 0.0233819 331162 9.0248e+07 5.14092e+06 23247 4.42752e+07 0 0.141927 0.98602 0.822172 8.89863e+07 0.00263784 1.93566e+07 7.5941e+06 1.95155e+07 234 1.94712e+07 1.6443e+07 0.00222956 1.95189e+07 50.0611 0.00366947 0.987363 0 50.2043 GTEX-1QW4Y-0426-SM-E76P2 1 B1 6 pieces, target muscularis; no mucosa. Switch with -0525 7.2 Esophagus Esophagus - Muscularis 0004648 460 788 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993247 451379 0.977653 0.994579 0.84002 23364 1 76 0.00169989 274 0 9.388e+07 0.0220657 919082 9.43917e+07 5.34015e+06 23387 4.67677e+07 0 0.137633 0.994579 0.835466 9.388e+07 0.0024542 2.03689e+07 7.7151e+06 2.05557e+07 298 2.05795e+07 1.65617e+07 0.00207654 2.04562e+07 49.8497 0.00973689 0.995911 0 50.2283 GTEX-1QW4Y-0526-SM-EAZ3V 2 B1 6 pieces target squamous mucosa is partly sloughing, ~0.2mm, ~5-10% thickness. Chronic lymphoid aggregates in lamina propria. Switch with -0425 7.8 Esophagus Esophagus - Mucosa 0006920 458 790 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990389 446896 0.974068 0.991207 0.815873 25417 1 76 0.00252324 281 0 1.18738e+08 0.0243876 667246 1.19791e+08 1.02338e+07 25451 5.9105e+07 0 0.158195 0.991207 0.808699 1.18738e+08 0.00318882 2.65454e+07 1.56309e+07 2.67291e+07 329 2.67206e+07 2.13687e+07 0.00285576 2.66473e+07 49.9314 0.00557006 0.992025 0 50.1724 GTEX-1QW4Y-0626-SM-E9J2O 1 B1 6 pieces, confirmed target muscularis. Adherent rim of serosa up to ~1.5mm 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 463 785 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.986934 376298 0.973781 0.987688 0.819973 23176 1 76 0.00171269 209 0 8.72712e+07 0.0259573 981911 8.8359e+07 4.18520e+06 23198 4.34826e+07 0 0.153807 0.987688 0.809878 8.72712e+07 0.00245461 1.89235e+07 6.46435e+06 1.91075e+07 251 1.89817e+07 1.39401e+07 0.00208337 1.91147e+07 50.1746 0.0111127 0.988443 0 50.2419 GTEX-1QW4Y-0726-SM-DTX8E 2 B1 6 pieces, target mucosa partly sloughed, up to ~0.5mm, moderately autolyzed 8.1 Stomach Stomach 0000945 475 773 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991627 739282 0.977199 0.993734 0.82825 22897 1 76 0.00179159 170 0 7.54004e+07 0.0224633 480504 7.58758e+07 3.54567e+06 22915 3.7501e+07 0 0.148949 0.993734 0.823061 7.54004e+07 0.00220079 1.65219e+07 6.00276e+06 1.65154e+07 185 1.66982e+07 1.41662e+07 0.00199576 1.64847e+07 49.6783 0.00633277 0.995842 0 49.9901 GTEX-1QW4Y-0826-SM-DTXE1 0 B1 2 pieces, trace mesothelium/fascia 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 485 763 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994415 534963 0.976851 0.995304 0.834881 22690 1 76 0.00183958 159 0 7.00844e+07 0.0228646 412513 7.0415e+07 3.46446e+06 22708 3.49169e+07 0 0.14197 0.995304 0.83096 7.00844e+07 0.00233546 1.54327e+07 6.23225e+06 1.55298e+07 176 1.5609e+07 1.26304e+07 0.0020873 1.54128e+07 49.6837 0.00585831 0.996193 0 50.1568 GTEX-1QW4Y-0926-SM-DPRY2 1 B1 2 pieces, islets numerous and well-preserved, rep encircled, only trace fat 6.3 Pancreas Pancreas 0001150 489 759 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993987 253836 0.983413 0.99489 0.86219 19562 1 76 0.00189314 93 0 5.54162e+07 0.016398 189965 5.57009e+07 2.93937e+06 19576 2.76108e+07 0 0.121223 0.99489 0.857785 5.54162e+07 0.00271031 1.28098e+07 1.56554e+07 1.30265e+07 106 1.29721e+07 1.7454e+07 0.00230135 1.29096e+07 49.8793 0.00341045 0.995793 0 50.4192 GTEX-1QW4Y-1026-SM-DTXE2 0 B1 2 pieces, fibroadipose elements only 7 Breast Breast - Mammary Tissue 0008367 493 755 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99426 440381 0.975224 0.994962 0.816906 23358 1 76 0.00188383 210 0 8.37626e+07 0.0244903 539814 8.41868e+07 4.27419e+06 23388 4.17436e+07 0 0.158318 0.994962 0.81279 8.37626e+07 0.00236228 1.84045e+07 7.24943e+06 1.84968e+07 217 1.85394e+07 1.47416e+07 0.00212288 1.842e+07 49.8385 0.0064121 0.995664 0 50.125 GTEX-1QW4Y-1126-SM-DTXE3 0 B1 6 pieces, moderate dermal fat; squamous epithelium is ~50-60 microns 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 496 752 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993058 613611 0.971826 0.994127 0.776882 24315 1 76 0.0019884 227 0 9.10669e+07 0.0279925 698230 9.16049e+07 4.80629e+06 24348 4.53644e+07 0 0.194944 0.994127 0.772319 9.10669e+07 0.00234393 2.01412e+07 9.88554e+06 2.027e+07 231 2.03246e+07 1.48038e+07 0.00216597 2.01832e+07 49.8256 0.00762219 0.995196 0 50.1594 GTEX-1QW4Y-1226-SM-EWRMY 1 B1 5 pieces, target lymphoid aggregates well preserved, ~10-20% of tissue, rep delineated 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 505 743 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987786 340431 0.975671 0.990512 0.836369 25497 1 76 0.00231829 377 0 1.08067e+08 0.0238887 1.17684e+06 1.09102e+08 7.45785e+06 25530 5.37694e+07 0 0.139302 0.990512 0.828434 1.08067e+08 0.00293183 2.36287e+07 1.03415e+07 2.38641e+07 331 2.38634e+07 1.74791e+07 0.00261704 2.387e+07 50.007 0.0107866 0.993238 0 50.2478 GTEX-1QW4Y-1326-SM-EWRMZ 1 B1 6 pieces, target mucosa well-fixed, partially stripped, 0.4mm, ~10-20% of thickness 7.9 Colon Colon - Transverse 0001157 518 730 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988751 369769 0.976119 0.991564 0.838018 24624 1 76 0.00215646 384 0 1.20739e+08 0.02355 1.01878e+06 1.21766e+08 7.75968e+06 24657 6.00792e+07 0 0.138101 0.991564 0.830948 1.20739e+08 0.0030904 2.61866e+07 1.02291e+07 2.64655e+07 334 2.64879e+07 2.17736e+07 0.00261119 2.64498e+07 49.964 0.00836673 0.994377 0 50.2649 GTEX-1QW4Y-1426-SM-E76P3 1 B1 6 pieces, target muscularis is ~60% of tissue, sample with care 7.3 Colon Colon - Sigmoid 0001159 526 722 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993104 497614 0.973159 0.994568 0.804827 23831 1 76 0.00178267 284 0 1.0114e+08 0.0265712 799021 1.01692e+08 6.48223e+06 23866 5.03698e+07 0 0.168332 0.994568 0.800456 1.0114e+08 0.00260439 2.1922e+07 8.45815e+06 2.20297e+07 327 2.20992e+07 1.73499e+07 0.00219293 2.19822e+07 49.8674 0.00785724 0.996033 0 50.1226 GTEX-1QW4Y-1526-SM-EAZ3Z 0 B1 6 pieces, moderate dermal fat (rep delineated); squamous epithelium is ~50-60 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 735 513 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987708 280703 0.971567 0.98863 0.790644 24715 1 76 0.00202727 176 0 8.02634e+07 0.0281253 740420 8.11864e+07 6.93254e+06 24746 3.99819e+07 0 0.180923 0.98863 0.781655 8.02634e+07 0.00298207 1.77008e+07 7.19419e+06 1.78008e+07 198 1.7762e+07 1.35111e+07 0.00250423 1.78125e+07 50.071 0.00912 0.989553 0 50.1409 GTEX-1QW4Y-1626-SM-EAZ41 0 B1 2 pieces, trace fascia 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 735 513 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987088 338594 0.976422 0.987883 0.829994 23838 1 76 0.00203875 377 0 9.92778e+07 0.0232168 731740 1.00495e+08 8.55986e+06 23868 4.94598e+07 0 0.146428 0.987883 0.819938 9.92778e+07 0.00282281 2.17868e+07 9.88951e+06 2.20746e+07 336 2.20107e+07 1.67792e+07 0.00243047 2.19294e+07 49.9075 0.00728132 0.988679 0 50.3281 GTEX-1QW4Y-1726-SM-EWRN1 0 B1 2 pieces, ~10-15% interstitial fat/vascular elements, rep delineated 7.9 Muscle Muscle - Skeletal 0011907 738 510 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98989 340347 0.983076 0.992647 0.875905 21363 1 76 0.00207529 275 0 1.10091e+08 0.0167096 1.32149e+06 1.10907e+08 7.70859e+06 21380 5.48075e+07 0 0.107171 0.992647 0.869465 1.10091e+08 0.00261281 2.42531e+07 1.12667e+07 2.4456e+07 314 2.45204e+07 2.26324e+07 0.00233701 2.44325e+07 49.9102 0.0119153 0.995403 0 50.2083 GTEX-1QW4Y-1826-SM-EVYBO 0 B1 3 pieces, discontinuous rims of adherent fat up to ~0.5mm 6.8 Nerve Nerve - Tibial 0001323 740 508 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.987826 472545 0.963119 0.988519 0.749193 23747 1 76 0.00193172 160 0 7.56429e+07 0.036585 282298 7.65214e+07 3.29703e+06 23789 3.76852e+07 0 0.213926 0.988519 0.740591 7.56429e+07 0.00317102 1.64725e+07 1.30054e+07 1.66831e+07 173 1.66223e+07 1.18617e+07 0.00255093 1.65908e+07 49.9525 0.00368914 0.989212 0 50.3177 GTEX-1QW4Y-1926-SM-E8VO3 0 B1 2 pieces, no significant atherosis or adherent fat, partial edge of fibrous tissue up to ~1.5mm (sections are longitudinal, not cross sections) 7.3 Blood Vessel Artery - Tibial 0007610 741 507 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.988155 794635 0.975777 0.990222 0.842288 24662 1 76 0.00200125 390 0 1.4788e+08 0.0236937 375234 1.4934e+08 1.06783e+07 24703 7.35604e+07 0 0.133489 0.990222 0.834053 1.4788e+08 0.00319456 3.16292e+07 1.31152e+07 3.23453e+07 331 3.26466e+07 3.34438e+07 0.00259666 3.15943e+07 49.1809 0.00251262 0.99229 0 50.5597 GTEX-1R46S-0003-SM-DE1JG B1 Blood Whole Blood 0013756 759 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R46S-0003-SM-DLIQ7 B1 Blood Whole Blood 0013756 759 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R46S-0006-SM-DO93Y B1 6.4 Blood Whole Blood 0013756 759 BP-69363 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993227 640421 0.977977 0.9939 0.831458 17764 1 76 0.00223288 164 0 8.93335e+07 0.0215778 724488 8.98818e+07 5.20925e+06 17771 4.45099e+07 0 0.146518 0.9939 0.826386 8.93335e+07 0.00272948 1.98687e+07 3.58479e+07 2.00085e+07 196 1.99698e+07 1.91356e+07 0.00248101 1.99716e+07 50.0023 0.00806045 0.994572 0 50.1752 GTEX-1R46S-0011-R6a-SM-EZ6N6 B1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 761 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989417 292222 0.971761 0.991411 0.853041 22785 1 76 0.00299569 370 0 1.01817e+08 0.0281248 9.58622e+06 1.02699e+08 7.45133e+06 22801 5.0719e+07 0 0.11872 0.991411 0.845715 1.01817e+08 0.00422156 2.20634e+07 2.54331e+07 2.27334e+07 332 2.23695e+07 7.02954e+06 0.00360739 2.25579e+07 50.2096 0.0933429 0.993405 0 50.7477 GTEX-1R46S-0011-R7b-SM-EXUTH B1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 761 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.991268 258647 0.981652 0.992251 0.863175 19724 1 76 0.00238719 366 0 8.08393e+07 0.0182644 9.38124e+06 8.14706e+07 2.15141e+06 19732 4.0268e+07 0 0.118477 0.992251 0.856486 8.08393e+07 0.00287057 1.76276e+07 2.53771e+07 1.83003e+07 358 1.79242e+07 4.2174e+06 0.00262864 1.80373e+07 50.1573 0.115149 0.993233 0 50.9361 GTEX-1R46S-0011-R9a-SM-EZ6N7 B1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 761 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989757 402437 0.965896 0.991505 0.81943 24422 1 76 0.00265179 388 0 1.00978e+08 0.0337624 1.80742e+06 1.01843e+08 7.85104e+06 24449 5.02955e+07 0 0.146466 0.991505 0.812468 1.00978e+08 0.0041043 2.24419e+07 9.7678e+06 2.27214e+07 335 2.26032e+07 1.5009e+07 0.00337677 2.27177e+07 50.1263 0.0177471 0.993252 0 50.3094 GTEX-1R46S-0126-SM-E9J3O 0 B1 2 pieces, no significant adherent fat 6.4 Nerve Nerve - Tibial 0001323 870 967 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.979223 378266 0.964376 0.979915 0.746971 24206 1 76 0.00202334 221 0 8.8044e+07 0.0353693 433937 8.98486e+07 4.39628e+06 24251 4.38582e+07 0 0.217405 0.979915 0.731968 8.8044e+07 0.00279224 1.92843e+07 1.1325e+07 1.94789e+07 216 1.93538e+07 1.31208e+07 0.00240752 1.94747e+07 50.1557 0.00482965 0.980607 0 50.251 GTEX-1R46S-0326-SM-EWRNE 0 B1 2 pieces, ~5% interstitial fat rep delineated 7.2 Muscle Muscle - Skeletal 0011907 871 966 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989246 202439 0.982407 0.992144 0.866989 19666 1 76 0.0022964 224 0 7.51133e+07 0.017369 739660 7.57081e+07 5.00471e+06 19682 3.73866e+07 0 0.115418 0.992144 0.860178 7.51133e+07 0.00303313 1.65427e+07 8.26857e+06 1.67392e+07 204 1.6714e+07 1.43893e+07 0.00265507 1.67465e+07 50.0486 0.0097699 0.995042 0 50.2952 GTEX-1R46S-0426-SM-EVR48 1 B1 2 pieces, few ~1mm colloid cysts 5.9 Thyroid Thyroid 0002046 872 965 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988221 209660 0.968341 0.990123 0.736067 24260 1 76 0.00228701 161 0 8.64385e+07 0.031411 245720 8.73008e+07 6.45867e+06 24302 4.30287e+07 0 0.232273 0.990123 0.728797 8.64385e+07 0.00361265 1.88882e+07 7.8024e+06 1.90953e+07 202 1.90773e+07 1.282e+07 0.00294856 1.9058e+07 49.9747 0.00281464 0.992025 0 50.2726 GTEX-1R46S-0526-SM-EVYBZ 0 B1 2 pieces, ~10% fascia/ vascular elements; rep delineated 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 872 965 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990375 398323 0.973569 0.990961 0.779747 22651 1 76 0.00209238 159 0 7.78156e+07 0.0261845 323634 7.85254e+07 3.32832e+06 22688 3.87808e+07 0 0.193822 0.990961 0.772699 7.78156e+07 0.0030549 1.70822e+07 7.95312e+06 1.72483e+07 185 1.718e+07 1.24151e+07 0.00257336 1.71993e+07 50.028 0.00412139 0.991547 0 50.2419 GTEX-1R46S-0626-SM-E9J41 0 B1 6 pieces, moderate dermal fat; squamous epithelium is ~35 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 873 964 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.98605 547710 0.965513 0.986774 0.776851 23020 1 76 0.00190829 217 0 8.55884e+07 0.034296 588950 8.67356e+07 3.86201e+06 23054 4.2664e+07 0 0.188662 0.986774 0.766576 8.55884e+07 0.00256796 1.86809e+07 1.49772e+07 1.88401e+07 208 1.87752e+07 1.4229e+07 0.00223788 1.88185e+07 50.0576 0.00679018 0.987499 0 50.2121 GTEX-1R46S-0726-SM-E9J42 1 B1 6 pieces, trace atherosis 6.2 Blood Vessel Artery - Aorta 0001496 874 963 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.977856 524475 0.970947 0.978727 0.759396 23315 1 76 0.00217523 181 0 8.92544e+07 0.0286799 346248 9.11944e+07 4.56352e+06 23361 4.44022e+07 0 0.211551 0.978727 0.743242 8.92544e+07 0.00306297 1.93319e+07 7.17754e+06 1.94986e+07 203 1.94024e+07 1.45812e+07 0.00261871 1.95092e+07 50.1373 0.00379681 0.979598 0 50.2146 GTEX-1R46S-1026-SM-E8VN3 1 B1 2 pieces, adherent nubbins of fat up to ~1mm, delineated; mild atherosis, ~10-15% luminal occlusion 6.6 Blood Vessel Artery - Coronary 0001621 878 959 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.983245 413872 0.972532 0.984392 0.78517 23200 1 76 0.0018427 171 0 8.20222e+07 0.027176 213794 8.33227e+07 4.45683e+06 23232 4.08365e+07 0 0.187362 0.984392 0.772915 8.20222e+07 0.00252366 1.7712e+07 7.49959e+06 1.78856e+07 188 1.78106e+07 1.48203e+07 0.00218279 1.78834e+07 50.102 0.00256585 0.985538 0 50.2438 GTEX-1R46S-1426-SM-EXOJD 2 B1 2 pieces, ~40% adherent/interstitial fat, rep delinated. Islets poorly preserved, moderately-advanced saponification 7.1 Pancreas Pancreas 0001150 883 954 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.975937 223102 0.96413 0.978148 0.802251 22046 1 76 0.00222429 129 0 7.36693e+07 0.0356558 249058 7.5315e+07 4.66196e+06 22065 3.66224e+07 0 0.161879 0.978148 0.784721 7.36693e+07 0.00395138 1.64601e+07 1.14158e+07 1.65994e+07 139 1.66137e+07 1.69177e+07 0.00308588 1.66074e+07 49.9906 0.00330688 0.980359 0 50.2106 GTEX-1R46S-2026-SM-DTX9E 1 B1 6 pieces, confirmed target muscularis 6 Esophagus Esophagus - Muscularis 0004648 892 945 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990583 617690 0.974361 0.992692 0.806476 22377 1 76 0.00205888 205 0 8.65375e+07 0.0254436 1.43392e+06 8.71746e+07 4.02483e+06 22405 4.30384e+07 0 0.167885 0.992692 0.800583 8.65375e+07 0.00259698 1.90675e+07 7.80952e+06 1.91139e+07 229 1.92614e+07 1.32947e+07 0.00232736 1.90898e+07 49.7762 0.0164488 0.994801 0 50.0608 GTEX-1R46S-2426-SM-E76QA 0 B1 6 pieces, minimal dermal fat; squamous epithelium is ~40 microns 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 895 942 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992734 464818 0.973809 0.994105 0.762035 23323 1 76 0.00195887 293 0 1.02536e+08 0.0259848 491893 1.03144e+08 6.36154e+06 23364 5.10856e+07 0 0.211774 0.994105 0.757543 1.02536e+08 0.00271353 2.26063e+07 9.81575e+06 2.27027e+07 285 2.27913e+07 1.75945e+07 0.00233568 2.26476e+07 49.8419 0.00476899 0.995477 0 50.1064 GTEX-1R46S-2526-SM-E8VN2 1 B1 2 pieces, mainly fibroadipose elements, trace atrophic ductal elements encircled. Fibrous mastopathy. 7.6 Breast Breast - Mammary Tissue 0008367 900 937 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988959 782960 0.965719 0.990294 0.779489 23758 1 76 0.00178371 172 0 8.17826e+07 0.0339474 270107 8.25841e+07 4.05293e+06 23786 4.07283e+07 0 0.18623 0.990294 0.771924 8.17826e+07 0.00230687 1.78186e+07 1.694e+07 1.80276e+07 187 1.79917e+07 1.45589e+07 0.00204493 1.79654e+07 49.9634 0.00327069 0.99163 0 50.2915 GTEX-1R46S-2926-SM-EXOJE 2 B1 1 piece, adenohypophysis 7.9 Pituitary Pituitary 0000007 933 904 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984409 242221 0.958701 0.986236 0.732891 24165 1 76 0.00211178 120 0 6.48413e+07 0.0410374 230545 6.57462e+07 3.82241e+06 24200 3.22507e+07 0 0.22581 0.986236 0.722804 6.48413e+07 0.00348101 1.39472e+07 7.62992e+06 1.4039e+07 134 1.40313e+07 1.01974e+07 0.00279513 1.40648e+07 50.0597 0.00350659 0.988063 0 50.1641 GTEX-1R46S-3026-SM-DTXFP 1 B1 4 pieces (fragmented), no abnormalities 6.2 Brain Brain - Cortex 0001870 934 903 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 EXCLUDE 0.993953 436369 0.958681 0.994522 0.786891 24400 1 76 0.00236279 389 0 1.11661e+08 0.0410347 3.77029e+06 1.12276e+08 6.05399e+06 24438 5.5654e+07 0 0.17179 0.994522 0.78258 1.11661e+08 0.00266631 2.44152e+07 1.04799e+07 2.48751e+07 344 2.46798e+07 1.43338e+07 0.00251447 2.46664e+07 49.9864 0.0335807 0.99509 0 50.4665 GTEX-1R46S-3126-SM-DPRZ9 1 B1 4 pieces, no abnormalities 6.6 Brain Brain - Cerebellum 0002037 935 902 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.992835 444024 0.942792 0.993947 0.741639 23290 1 76 0.00288629 130 0 6.83639e+07 0.0569058 1.18368e+06 6.87802e+07 3.31904e+06 23311 3.40393e+07 0 0.201153 0.993947 0.737149 6.83639e+07 0.00308373 1.46832e+07 1.47416e+07 1.48212e+07 158 1.47812e+07 8.03306e+06 0.0029849 1.47938e+07 50.0213 0.0172097 0.995058 0 50.2339 GTEX-1R7EU-0003-SM-DE1JE B1 Blood Whole Blood 0013756 -124 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R7EU-0003-SM-DLIQ4 B1 Blood Whole Blood 0013756 -124 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R7EU-0006-SM-DO93C B1 7.6 Blood Whole Blood 0013756 -124 BP-69363 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993244 955005 0.96986 0.993982 0.835008 18585 1 76 0.00219146 274 0 1.18628e+08 0.0296454 390091 1.19346e+08 6.84691e+06 18595 5.91146e+07 0 0.134852 0.993982 0.829982 1.18628e+08 0.00261194 2.64664e+07 6.84703e+07 2.66436e+07 307 2.66752e+07 2.74177e+07 0.00240154 2.65264e+07 49.8601 0.00326858 0.994719 0 50.1668 GTEX-1R7EU-0126-SM-EVR4F 1 B1 2 pieces; one with 90% fibromuscular stroma and 10% adipose tissue and other with fibromuscular stroma and moderately autolyzed glandular component with cystic dilatation 5.8 Prostate Prostate 0002367 379 446 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988751 288728 0.971421 0.990548 0.789699 25637 1 76 0.00223954 273 0 1.06128e+08 0.0282753 387178 1.07141e+08 7.68687e+06 25685 5.28331e+07 0 0.181722 0.990548 0.782234 1.06128e+08 0.0035243 2.30385e+07 9.28354e+06 2.33264e+07 309 2.32518e+07 1.71372e+07 0.00288076 2.32927e+07 50.0439 0.00361373 0.992344 0 50.3104 GTEX-1R7EU-0226-SM-EVR4G 1 B1 4 pieces; tangentially cut hair bearing skin; ~34 microns thick epidermis 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 384 441 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987826 322418 0.974583 0.98977 0.827372 23892 1 76 0.00222754 321 0 1.02307e+08 0.0251296 585487 1.03365e+08 7.85206e+06 23925 5.09287e+07 0 0.147211 0.98977 0.818908 1.02307e+08 0.00348574 2.22988e+07 1.14639e+07 2.25495e+07 308 2.25219e+07 1.90686e+07 0.0028554 2.251e+07 49.9868 0.00566429 0.991714 0 50.2795 GTEX-1R7EU-0326-SM-EWRNJ 1 B1 2 pieces; mature adipose tissue and fibrovascular component 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 387 438 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98825 288054 0.977443 0.990737 0.843081 23363 1 76 0.00237536 280 0 9.27046e+07 0.0222308 657301 9.35714e+07 6.37849e+06 23387 4.61435e+07 0 0.134362 0.990737 0.835271 9.27046e+07 0.00289754 2.03316e+07 8.46696e+06 2.0581e+07 288 2.0595e+07 1.70873e+07 0.00262969 2.0519e+07 49.9076 0.00702459 0.993223 0 50.3049 GTEX-1R7EU-0426-SM-EVR4H 1 B1 2 pieces; early atherosis; focal medial calcification (outlined); ~1.4mm attached adventitia 6.6 Blood Vessel Artery - Tibial 0007610 389 436 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987345 255668 0.974945 0.989163 0.819925 21866 1 76 0.0022882 210 0 8.92312e+07 0.0246537 299455 9.02088e+07 7.3154e+06 21886 4.44011e+07 0 0.15502 0.989163 0.811039 8.92312e+07 0.00346015 1.92978e+07 6.01301e+06 1.94904e+07 234 1.94561e+07 1.62307e+07 0.0028731 1.94847e+07 50.0367 0.00331958 0.99098 0 50.2482 GTEX-1R7EU-0526-SM-E76QO 1 B1 3 pieces; 1mm epineurium with external fat 6.5 Nerve Nerve - Tibial 0001323 391 434 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992545 547503 0.973446 0.993984 0.807963 24171 1 76 0.00197664 290 0 1.01879e+08 0.0261664 314571 1.02496e+08 6.53042e+06 24210 5.07378e+07 0 0.165483 0.993984 0.803102 1.01879e+08 0.00278792 2.24684e+07 8.78815e+06 2.26288e+07 322 2.27389e+07 1.86676e+07 0.00238169 2.24959e+07 49.7315 0.00306911 0.995423 0 50.1778 GTEX-1R7EU-0626-SM-DTX9N 1 B1 2 pieces; small amount of perivascular fat (outlined); rim of epimysium (arrow) 8.7 Muscle Muscle - Skeletal 0011907 393 432 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992214 901527 0.982999 0.994086 0.864947 21048 1 76 0.00177899 214 0 8.90019e+07 0.0167343 1.05012e+06 8.95314e+07 3.32434e+06 21064 4.42762e+07 0 0.118052 0.994086 0.859832 8.90019e+07 0.00216329 1.94507e+07 8.95952e+06 1.9551e+07 236 1.97698e+07 1.81022e+07 0.00197078 1.93725e+07 49.4925 0.011729 0.995958 0 50.1285 GTEX-1R7EU-0726-SM-DPRZM 1 B1 2 pieces; preserved parenchyma with Langerhans islets (rep outlined); moderately autolyzed septal fat; larger ductal structure (arrow) with fibrotic band 7.9 Pancreas Pancreas 0001150 395 430 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994855 116721 0.984233 0.995729 0.877076 19046 1 76 0.00186113 92 0 5.16095e+07 0.0154555 102890 5.18308e+07 2.60063e+06 19055 2.57306e+07 0 0.107156 0.995729 0.873331 5.16095e+07 0.00277653 1.19668e+07 1.30147e+07 1.20823e+07 103 1.20246e+07 1.68666e+07 0.00231842 1.20698e+07 50.0937 0.00198511 0.996604 0 50.2401 GTEX-1R7EU-0826-SM-DPRZL 1 B1 6 pieces; focal desquamation of the surface; ~0.3mm thick squamous epithelium; submucosa with focal lymphoid aggregates (arrows); submucosal gland (outlined) 9.4 Esophagus Esophagus - Mucosa 0006920 403 422 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994519 172027 0.977434 0.99531 0.841725 21259 1 76 0.00185876 126 0 6.0308e+07 0.0222589 245439 6.05922e+07 3.07405e+06 21272 3.00691e+07 0 0.135708 0.99531 0.837778 6.0308e+07 0.00257452 1.3548e+07 7.77885e+06 1.36432e+07 137 1.36229e+07 1.29871e+07 0.00221636 1.36146e+07 49.9849 0.00405067 0.996101 0 50.1751 GTEX-1R7EU-0926-SM-E6CQ5 1 B1 6 pieces; target muscularis and up to 1.12mm attached moderately autolyzed serosa 7.8 Esophagus Esophagus - Muscularis 0004648 407 418 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991757 531434 0.979079 0.993867 0.850034 22698 1 76 0.002232 287 0 9.21582e+07 0.0206028 498273 9.27268e+07 1.66495e+07 22717 4.58621e+07 0 0.129044 0.993867 0.844821 9.21582e+07 0.00319192 2.01885e+07 8.78182e+06 2.00468e+07 257 2.00653e+07 1.79358e+07 0.00271094 2.03463e+07 50.3476 0.00537356 0.995977 0 49.8238 GTEX-1R7EU-1026-SM-EVR4I 1 B1 6 pieces; target muscularis with rim of serosa and perimysium with ganglions, nerves and vessels 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 410 415 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98881 303567 0.977437 0.990874 0.840601 23507 1 76 0.00213718 387 0 1.22091e+08 0.0222293 844081 1.23215e+08 9.29945e+06 23540 6.07795e+07 0 0.136836 0.990874 0.83293 1.22091e+08 0.00360009 2.6345e+07 1.08769e+07 2.66104e+07 338 2.65058e+07 2.28333e+07 0.00286711 2.66749e+07 50.159 0.00685047 0.992937 0 50.2507 GTEX-1R7EU-1126-SM-EAZ4M 1 B1 7 pieces; mild to moderate autolysis of mucosa and moderate autolysis of submucosa; preserved muscularis; scattered lymphoid aggregates in submucosa (arrows) 5.8 Stomach Stomach 0000945 412 413 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987288 384515 0.977441 0.988228 0.823191 24027 1 76 0.0023286 426 0 1.17132e+08 0.0218735 1.39778e+06 1.18527e+08 9.58861e+06 24058 5.83388e+07 0 0.15425 0.988228 0.813501 1.17132e+08 0.00314667 2.66209e+07 7.91362e+07 2.69203e+07 398 2.68772e+07 2.40595e+07 0.00273725 2.67641e+07 49.8946 0.0117929 0.989169 0 50.2796 GTEX-1R7EU-1226-SM-E8VMR 1 B1 2 pieces; ~60% fibrovascular and neural tissue and ~40% adipose tissues; no ductal structures seen 6.5 Breast Breast - Mammary Tissue 0008367 415 410 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98573 543730 0.967614 0.987017 0.777355 24845 1 76 0.00176178 215 0 8.96523e+07 0.0321121 385759 9.08316e+07 4.86776e+06 24885 4.46479e+07 0 0.190259 0.987017 0.767262 8.96523e+07 0.00245359 1.96407e+07 9.12424e+06 1.98618e+07 218 1.98053e+07 1.51854e+07 0.00210723 1.9812e+07 50.0084 0.00424697 0.988303 0 50.2799 GTEX-1R7EU-1326-SM-E6CQ6 2 B1 6 piece; moderately autolyzed mucosa; residual target lymphoid aggregates are over 25% of tissue 6.5 Small Intestine Small Intestine - Terminal Ileum 0001211 421 404 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99078 451807 0.974381 0.992759 0.815685 23991 1 76 0.00268534 169 0 8.32686e+07 0.0246753 807847 8.38759e+07 1.42879e+07 24018 4.13965e+07 0 0.158696 0.992759 0.809778 8.32686e+07 0.0038766 1.85495e+07 9.75548e+06 1.86303e+07 202 1.86484e+07 1.35018e+07 0.00327978 1.86739e+07 50.0341 0.00963145 0.994737 0 50.1087 GTEX-1R7EU-1626-SM-DTXG3 1 B1 6 pieces; insignificant periadnexal fat 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 419 406 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993725 684081 0.973859 0.994741 0.809221 23263 1 76 0.00196254 248 0 8.91717e+07 0.0259119 383144 8.96431e+07 4.88099e+06 23298 4.44171e+07 0 0.164637 0.994741 0.804966 8.91717e+07 0.00250277 1.94821e+07 9.53117e+06 1.95651e+07 223 1.96664e+07 1.64765e+07 0.00223238 1.94703e+07 49.7495 0.0042741 0.995757 0 50.1062 GTEX-1R7EU-1726-SM-DTX9M 1 B1 2 pieces; spermatogenesis present 6.5 Testis Testis 0000473 420 405 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989687 1.14342e+06 0.931888 0.99185 0.752853 32743 1 76 0.00205122 185 0 8.78121e+07 0.0677423 837312 8.85337e+07 3.89254e+06 32805 4.36448e+07 0 0.179035 0.99185 0.746717 8.78121e+07 0.00234658 1.81985e+07 1.12164e+07 1.81083e+07 186 1.84497e+07 1.53057e+07 0.00219858 1.80142e+07 49.4028 0.00945756 0.994013 0 49.8757 GTEX-1R7EU-1826-SM-DTX9L 1 B1 6 pieces; target muscularis 7.6 Colon Colon - Sigmoid 0001159 423 402 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991605 712466 0.973905 0.993651 0.817908 22396 1 76 0.00189984 179 0 7.62969e+07 0.025847 553523 7.67845e+07 3.31296e+06 22414 3.79472e+07 0 0.155997 0.993651 0.812715 7.62969e+07 0.00241077 1.66682e+07 6.36869e+06 1.66815e+07 190 1.6824e+07 1.29013e+07 0.00215478 1.66645e+07 49.7618 0.00720879 0.995697 0 50.0199 GTEX-1R7EU-1926-SM-E9U62 1 B1 6 pieces; mildly autolyzed mucosa and preserved muscularis 6.8 Colon Colon - Transverse 0001157 422 403 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990452 305992 0.97234 0.991303 0.814327 24298 1 76 0.00213205 280 0 9.40565e+07 0.026604 1.14094e+06 9.48818e+07 3.23108e+06 24328 4.68614e+07 0 0.158013 0.991303 0.807244 9.40565e+07 0.00296361 2.08135e+07 1.17493e+07 2.09632e+07 295 2.09167e+07 1.45517e+07 0.00254747 2.09269e+07 50.0122 0.0120248 0.992153 0 50.1791 GTEX-1R7EU-2026-SM-E9U63 1 B1 2 pieces; mild congestion 7.7 Spleen Spleen 0002106 424 401 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991939 389832 0.967996 0.992781 0.775769 24424 1 76 0.00204575 208 0 9.35246e+07 0.0313484 275967 9.42047e+07 3.29141e+06 24465 4.66103e+07 0 0.192228 0.992781 0.770168 9.35246e+07 0.00283792 2.0671e+07 8.8297e+06 2.07343e+07 254 2.07376e+07 1.59961e+07 0.0024415 2.07426e+07 50.006 0.00292944 0.993622 0 50.0764 GTEX-1R7EV-0002-SM-DE1JB B1 Blood Whole Blood 0013756 -86 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R7EV-0002-SM-DLIQ9 B1 Blood Whole Blood 0013756 -86 BP-69280 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/20/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R7EV-0005-SM-DO938 B1 7 Blood Whole Blood 0013756 -86 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.97375 398008 0.986349 0.974314 0.839381 16417 1 76 0.00200466 262 0 1.24464e+08 0.012548 199483 1.27745e+08 6.98685e+06 16419 6.20043e+07 0 0.146969 0.974314 0.81782 1.24464e+08 0.00254355 2.98656e+07 1.80881e+08 2.98469e+07 275 2.98802e+07 3.66529e+07 0.00227395 2.99122e+07 50.0268 0.00156157 0.974879 0 49.9843 GTEX-1R7EV-0126-SM-EAZ3O 1 B1 2 pieces; congestion; small fragment of capsule (arrow); larger vessel included (outlined) 6.7 Spleen Spleen 0002106 233 800 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987093 375266 0.963128 0.987818 0.796661 24723 1 76 0.00241168 375 0 1.05442e+08 0.0359869 702519 1.06742e+08 8.18842e+06 24774 5.25098e+07 0 0.166467 0.987818 0.786956 1.05442e+08 0.00337115 2.3185e+07 1.56183e+07 2.33523e+07 332 2.3283e+07 1.72706e+07 0.00289107 2.33301e+07 50.0505 0.00658146 0.988543 0 50.1798 GTEX-1R7EV-0326-SM-E76PA 1 B1 2 pieces; fatty streaks along the vessels (outlined); one piece with ~25% external fat (arrow) 6.7 Heart Heart - Left Ventricle 0006566 328 705 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992927 437565 0.985744 0.994481 0.850208 20947 1 76 0.00155751 372 0 1.2539e+08 0.0140933 3.72053e+06 1.26086e+08 8.28397e+06 20958 6.2476e+07 0 0.135536 0.994481 0.845516 1.2539e+08 0.00225903 2.7183e+07 3.82325e+07 2.76233e+07 357 2.75168e+07 1.55668e+07 0.00190772 2.74298e+07 49.9208 0.029508 0.996035 0 50.4016 GTEX-1R7EV-0426-SM-DTX7Z 1 B1 2 pieces; 5-10% internal (interstitial, perivascular and subepicardial) fat (arrows) 8.1 Heart Heart - Atrial Appendage 0006631 352 681 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992313 763145 0.980283 0.994374 0.844443 21777 1 76 0.00158772 370 0 9.34801e+07 0.0194544 1.88912e+06 9.4009e+07 3.83279e+06 21795 4.65045e+07 0 0.13584 0.994374 0.839692 9.34801e+07 0.00193195 1.97388e+07 1.29668e+07 1.99411e+07 334 1.99821e+07 1.47685e+07 0.00175948 1.9856e+07 49.8417 0.0200951 0.996436 0 50.2548 GTEX-1R7EV-1026-SM-DTX81 1 B1 2 pieces; lobulated mature adipose tissue and fibrovascular component 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 371 662 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991318 817067 0.980641 0.993665 0.84823 21888 1 76 0.00175367 203 0 7.96092e+07 0.0191163 1.03916e+06 8.01168e+07 3.64130e+06 21902 3.95835e+07 0 0.13241 0.993665 0.842857 7.96092e+07 0.0022161 1.76941e+07 7.86531e+06 1.77202e+07 219 1.79171e+07 1.39484e+07 0.00198434 1.7667e+07 49.6487 0.0129705 0.996012 0 50.0369 GTEX-1R7EV-1126-SM-DPRXU 2 B1 2 pieces; rare Langerhans islets (outlined) 7.6 Pancreas Pancreas 0001150 373 660 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.995487 173088 0.980778 0.996165 0.862562 20225 1 76 0.00186291 103 0 6.36059e+07 0.0190473 169240 6.38508e+07 3.32994e+06 20234 3.17158e+07 0 0.118216 0.996165 0.859254 6.36059e+07 0.00254836 1.47168e+07 1.36508e+07 1.48154e+07 109 1.47783e+07 1.93463e+07 0.0022054 1.47965e+07 50.0308 0.00265055 0.996842 0 50.1669 GTEX-1R7EV-1226-SM-DTX82 2 B1 6 pieces; moderately to severely autolyzed mucosa and 3 of 6 pieces contain preserved lymphoid aggregates (outlined) 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 381 652 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988826 642579 0.97187 0.99083 0.813223 24073 1 76 0.00252677 161 0 7.44524e+07 0.0262203 342665 7.51415e+07 3.45608e+06 24101 3.69497e+07 0 0.158647 0.99083 0.805766 7.44524e+07 0.00300797 1.64448e+07 7.74164e+06 1.64328e+07 183 1.66112e+07 1.24207e+07 0.00276689 1.64046e+07 49.687 0.00456026 0.992834 0 49.9818 GTEX-1R7EV-1526-SM-E8VOD 1 B1 2 pieces; mature adipose tissue and ~15% fibrovascular component; no evidence of ductal structures 6.9 Breast Breast - Mammary Tissue 0008367 388 645 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.987463 490134 0.979418 0.989033 0.84586 21418 1 76 0.00158886 203 0 8.09448e+07 0.0203513 998008 8.18423e+07 4.06804e+06 21430 4.0324e+07 0 0.133558 0.989033 0.836584 8.09448e+07 0.00206761 1.78559e+07 8.30622e+06 1.81413e+07 252 1.81507e+07 1.32536e+07 0.00182785 1.79612e+07 49.7377 0.0121943 0.990602 0 50.3964 GTEX-1R7EV-1726-SM-E6CR8 1 B1 2 pieces; mildly to moderately autolyzed adrenal cortex 5.7 Adrenal Gland Adrenal Gland 0002369 397 636 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991566 382325 0.973644 0.993857 0.829384 22243 1 76 0.00220712 201 0 7.66516e+07 0.0261322 1.9116e+06 7.71254e+07 1.31907e+07 22265 3.81332e+07 0 0.144261 0.993857 0.824289 7.66516e+07 0.00348697 1.68109e+07 1.18068e+07 1.70612e+07 223 1.70723e+07 9.80466e+06 0.00284557 1.69364e+07 49.8003 0.0247856 0.996148 0 50.3695 GTEX-1R7EV-1926-SM-EVYBF 1 B1 2 piece; mature adipose tissue and fibrovascular components 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 404 629 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992033 347461 0.980081 0.992656 0.85794 21618 1 76 0.00178727 273 0 9.39663e+07 0.0196998 1.11585e+06 9.46615e+07 3.8922e+06 21632 4.68629e+07 0 0.122141 0.992656 0.85164 9.39663e+07 0.00270198 2.08119e+07 9.309e+06 2.11066e+07 326 2.10273e+07 1.57728e+07 0.00224434 2.09439e+07 49.9006 0.0117878 0.993279 0 50.3515 GTEX-1R7EV-2026-SM-DTX83 1 B1 2 pieces; fragmented specimen 7.3 Muscle Muscle - Skeletal 0011907 493 540 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991891 795138 0.979724 0.993934 0.862854 20147 1 76 0.00163586 174 0 7.73325e+07 0.0200753 698979 7.78044e+07 3.45844e+06 20161 3.84695e+07 0 0.11687 0.993934 0.85762 7.73325e+07 0.00212681 1.68429e+07 7.92474e+06 1.68793e+07 192 1.70546e+07 1.60496e+07 0.00188083 1.68046e+07 49.6309 0.00898379 0.995977 0 50.0539 GTEX-1R7EV-2126-SM-E9J2K 1 B1 2 pieces; small amounts of internal fat 5.9 Nerve Nerve - Tibial 0001323 497 536 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.982077 248467 0.967586 0.982662 0.734712 23510 1 76 0.00194903 175 0 7.70298e+07 0.0321205 378982 7.83889e+07 4.26736e+06 23550 3.83614e+07 0 0.232874 0.982662 0.721974 7.70298e+07 0.00259305 1.69418e+07 8.50130e+06 1.71391e+07 184 1.70258e+07 1.0995e+07 0.00227085 1.71052e+07 50.1163 0.00483464 0.983246 0 50.2895 GTEX-1R7EV-2226-SM-E8VOE 1 B1 2 pieces; atherosclerotic plaque and medial calcifications (arrows); ~50% attached adventitia and fat (outlined) 7.1 Blood Vessel Artery - Tibial 0007610 498 535 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986304 336482 0.976864 0.987329 0.840858 22423 1 76 0.0016341 211 0 8.87222e+07 0.022788 241704 8.98609e+07 4.09089e+06 22443 4.42049e+07 0 0.136007 0.987329 0.830203 8.87222e+07 0.00222956 1.93445e+07 7.18594e+06 1.94504e+07 237 1.93836e+07 1.75688e+07 0.00193152 1.95056e+07 50.1568 0.00268976 0.988354 0 50.1366 GTEX-1R7EV-2426-SM-EVYBG 1 B1 6 pieces; thin epidermis up to ~30 micron thick; ~50% external fat 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 509 524 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988772 264674 0.976167 0.989365 0.77291 23512 1 76 0.00197479 201 0 7.9542e+07 0.0235696 483975 8.03971e+07 3.21046e+06 23545 3.96441e+07 0 0.203257 0.989365 0.76469 7.9542e+07 0.00318894 1.74621e+07 7.22651e+06 1.7597e+07 190 1.7543e+07 1.31772e+07 0.0025815 1.75658e+07 50.0325 0.00601981 0.989957 0 50.1924 GTEX-1R9JW-0002-SM-DO93B B1 7.6 Blood Whole Blood 0013756 -56 BP-69363 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.992619 878829 0.964474 0.993444 0.816091 19263 1 76 0.0020017 204 0 1.02545e+08 0.0350193 661177 1.03222e+08 5.78062e+06 19278 5.11026e+07 0 0.148383 0.993444 0.810741 1.02545e+08 0.00265901 2.29605e+07 7.11279e+07 2.3096e+07 248 2.31332e+07 2.35702e+07 0.00233008 2.30151e+07 49.872 0.00640541 0.994269 0 50.1471 GTEX-1R9JW-0005-SM-DE1JN B1 Blood Whole Blood 0013756 -56 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9JW-0005-SM-DLIPE B1 Blood Whole Blood 0013756 -56 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9JW-0126-SM-EAZ4P 1 B1 2 pieces, no abnormalities 7.1 Spleen Spleen 0002106 128 997 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.983916 476085 0.960594 0.984789 0.736031 25609 1 76 0.00374825 271 0 1.10249e+08 0.0347601 603587 1.11952e+08 9.3226e+06 25655 5.46408e+07 0 0.224564 0.984789 0.724834 1.10249e+08 0.00466034 2.43682e+07 2.39142e+07 2.4494e+07 271 2.4495e+07 1.53542e+07 0.00420389 2.44634e+07 49.9677 0.00539149 0.985661 0 50.1287 GTEX-1R9JW-0226-SM-EVR4K 1 B1 2 pieces, adherent fat/fibrous tissue up to ~1.5mm, delineated 6.5 Thyroid Thyroid 0002046 266 859 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989615 118388 0.968155 0.991347 0.75361 23107 1 76 0.0022635 107 0 5.472e+07 0.0315357 188168 5.51977e+07 4.05878e+06 23134 2.72513e+07 0 0.214545 0.991347 0.747089 5.472e+07 0.00344338 1.20181e+07 4.62314e+06 1.20715e+07 116 1.20604e+07 8.96522e+06 0.00285241 1.21156e+07 50.1141 0.00340898 0.993079 0 50.1108 GTEX-1R9JW-0326-SM-EAZ45 0 B1 2 pieces, fibrous mastopathy 5.7 Breast Breast - Mammary Tissue 0008367 271 854 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.985158 200002 0.979091 0.985871 0.859024 22912 1 76 0.00204548 181 0 7.784e+07 0.0206059 638500 7.89556e+07 6.78342e+06 22925 3.87956e+07 0 0.120067 0.985871 0.846887 7.784e+07 0.00274911 1.70654e+07 8.07454e+06 1.7244e+07 188 1.71582e+07 1.70709e+07 0.00239704 1.72109e+07 50.0767 0.00808683 0.986584 0 50.2603 GTEX-1R9JW-0426-SM-E76QL 1 B1 2 pieces, no abnormalities 7.9 Heart Heart - Atrial Appendage 0006631 276 849 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993389 575820 0.978341 0.994861 0.827285 23122 1 76 0.00202823 271 0 1.23947e+08 0.0213679 1.70903e+06 1.24588e+08 8.0897e+06 23154 6.17518e+07 0 0.151056 0.994861 0.823034 1.23947e+08 0.00268921 2.6631e+07 1.84869e+07 2.68665e+07 322 2.6922e+07 2.05689e+07 0.00235823 2.67275e+07 49.8187 0.0137175 0.996333 0 50.2201 GTEX-1R9JW-0526-SM-EWRNK 1 B1 2 pieces, minimal interstitial fibrosis/ischemic damage 7.2 Heart Heart - Left Ventricle 0006566 279 846 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988408 427635 0.985765 0.991772 0.849736 22213 1 76 0.0026587 373 0 1.39342e+08 0.014007 2.49274e+06 1.40498e+08 9.36065e+06 22245 6.93354e+07 0 0.136028 0.991772 0.842744 1.39342e+08 0.00355272 3.08002e+07 3.21257e+07 3.06607e+07 333 3.07039e+07 2.10558e+07 0.00309375 3.11019e+07 50.322 0.0177422 0.995135 0 49.8865 GTEX-1R9JW-0726-SM-DTXFH 1 B1 6 pieces, trace atherosis, <0.1mm 7.1 Blood Vessel Artery - Aorta 0001496 294 831 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993864 487018 0.973345 0.994679 0.812959 22454 1 76 0.00208442 171 0 8.44238e+07 0.0262761 327405 8.48754e+07 4.44487e+06 22477 4.20506e+07 0 0.160386 0.994679 0.808634 8.44238e+07 0.00254372 1.82613e+07 6.32903e+06 1.8351e+07 202 1.83896e+07 1.56071e+07 0.00231388 1.82902e+07 49.8645 0.00385748 0.995494 0 50.1225 GTEX-1R9JW-0826-SM-DPRZJ 1 B1 2 pieces, diffuse macrovesicular steatosis, severe, >90% of parenchyma 8.7 Liver Liver 0001114 298 827 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994256 430335 0.980442 0.995242 0.850571 21287 1 76 0.00215065 199 0 8.82006e+07 0.0180992 1.01135e+06 8.86223e+07 4.73489e+06 21303 4.39012e+07 0 0.129871 0.995242 0.846524 8.82006e+07 0.00279747 1.88228e+07 1.35491e+07 1.89435e+07 234 1.89798e+07 1.8564e+07 0.00247374 1.88581e+07 49.8392 0.011412 0.996227 0 50.1598 GTEX-1R9JW-1326-SM-E6CQ7 1 B1 2 pieces, myometrium only 7.1 Uterus Uterus 0000995 320 805 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991917 431421 0.970468 0.993771 0.778646 23508 1 76 0.0023233 164 0 7.85272e+07 0.0291905 190392 7.90194e+07 1.44862e+07 23546 3.90657e+07 0 0.191823 0.993771 0.773795 7.85272e+07 0.00334353 1.7389e+07 6.94876e+06 1.71118e+07 173 1.71363e+07 1.36827e+07 0.00283246 1.75065e+07 50.5344 0.00240943 0.995625 0 49.5983 GTEX-1R9JW-1426-SM-DTX9K 0 B1 6 pieces, squamous mucosa up to ~0.15mm 8.5 Vagina Vagina 0000996 324 801 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990354 700396 0.97606 0.992642 0.781455 23396 1 76 0.0020501 153 0 6.98354e+07 0.0236563 196409 7.03531e+07 3.16014e+06 23426 3.47114e+07 0 0.194604 0.992642 0.775705 6.98354e+07 0.00261036 1.5648e+07 6.4401e+06 1.56177e+07 154 1.58307e+07 1.31755e+07 0.00232958 1.55852e+07 49.6093 0.00279176 0.99493 0 49.9515 GTEX-1R9JW-1526-SM-DPRZK 1 B1 6 pieces, squamous mucosa up to ~0.4mm, ~15-20% thickness 9.6 Esophagus Esophagus - Mucosa 0006920 332 793 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994215 237253 0.979135 0.995093 0.831493 21051 1 76 0.00206188 129 0 5.6419e+07 0.0203483 254289 5.66972e+07 3.14234e+06 21067 2.81131e+07 0 0.147642 0.995093 0.827413 5.6419e+07 0.00288791 1.27024e+07 6.7114e+06 1.28267e+07 127 1.28231e+07 1.17970e+07 0.00247453 1.27513e+07 49.8595 0.00448504 0.995972 0 50.2433 GTEX-1R9JW-1626-SM-E76QK 1 B1 6 pieces, confirmed target muscularis 8 Esophagus Esophagus - Muscularis 0004648 333 792 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993646 476573 0.978523 0.994955 0.857982 23123 1 76 0.00175866 283 0 1.19986e+08 0.0211338 648274 1.20594e+08 6.59264e+06 23141 5.97926e+07 0 0.12054 0.994955 0.853654 1.19986e+08 0.00253623 2.56593e+07 8.82065e+06 2.59018e+07 324 2.5908e+07 2.43068e+07 0.00214693 2.57905e+07 49.8864 0.00537567 0.996265 0 50.2352 GTEX-1R9JW-1926-SM-EVR4J 1 B1 6 pieces, target lymphoid aggregates are ~10% tissue, borderline, rep delineated 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 354 771 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990509 245451 0.97544 0.992458 0.82683 23219 1 76 0.00223276 211 0 8.55743e+07 0.0242451 537991 8.62246e+07 6.39777e+06 23243 4.26071e+07 0 0.148611 0.992458 0.820594 8.55743e+07 0.00352911 1.85842e+07 6.99521e+06 1.87798e+07 233 1.87435e+07 1.55814e+07 0.00287966 1.87697e+07 50.035 0.00623941 0.994407 0 50.2617 GTEX-1R9JW-2026-SM-EAZ4O 1 B1 6 pieces, target mucosa well- fixed, up to ~0.5mm, ~10-80% thickness 7.2 Colon Colon - Transverse 0001157 358 767 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.992687 602691 0.974975 0.993519 0.810363 25526 1 76 0.00212164 381 0 1.20155e+08 0.0246586 875651 1.20939e+08 9.80885e+06 25573 5.98848e+07 0 0.164612 0.993519 0.805111 1.20155e+08 0.00289725 2.64855e+07 1.01993e+07 2.66718e+07 348 2.66502e+07 2.14206e+07 0.00250912 2.66035e+07 49.9561 0.00724042 0.994351 0 50.1753 GTEX-1R9JW-2126-SM-E76QT 1 B1 6 pieces, confirmed target muscularis, adherent fatty nubbins up to ~3mm 7.6 Colon Colon - Sigmoid 0001159 368 757 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993212 478902 0.976375 0.994543 0.817334 23395 1 76 0.00197763 283 0 9.89957e+07 0.0232436 488419 9.95388e+07 6.07846e+06 23423 4.93096e+07 0 0.15904 0.994543 0.812874 9.89957e+07 0.00269435 2.14808e+07 8.38761e+06 2.16328e+07 275 2.17276e+07 1.93983e+07 0.00233551 2.15048e+07 49.7423 0.00490682 0.995875 0 50.1763 GTEX-1R9JW-2226-SM-E8VMS 0 B1 2 pieces, trace adherent fat 6.9 Nerve Nerve - Tibial 0001323 463 662 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.982729 495386 0.964694 0.983955 0.758443 24054 1 76 0.00186662 191 0 8.2394e+07 0.0350274 275633 8.37375e+07 4.5205e+06 24097 4.10111e+07 0 0.206252 0.983955 0.746273 8.2394e+07 0.00263808 1.80232e+07 9.14593e+06 1.82104e+07 195 1.81355e+07 1.32543e+07 0.00225187 1.81987e+07 50.087 0.00329163 0.985181 0 50.2584 GTEX-1R9JW-2326-SM-E9J3U 0 B1 2 pieces rim of adherent fat/fibrous tissue up to ~0.8mm, ~40% total tissue; sample with care 7.9 Blood Vessel Artery - Tibial 0007610 464 661 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.987534 468911 0.974758 0.988507 0.803627 22004 1 76 0.00199978 163 0 7.57442e+07 0.0248479 277845 7.66249e+07 3.96813e+06 22025 3.77137e+07 0 0.171131 0.988507 0.79439 7.57442e+07 0.00276331 1.64149e+07 5.43094e+06 1.65622e+07 176 1.64855e+07 1.38875e+07 0.00238117 1.65662e+07 50.1222 0.00362604 0.989479 0 50.2233 GTEX-1R9JW-2426-SM-DTXFI 0 B1 2 pieces, myo-atrophy; interstitial fat/fibrous tissue up to ~40%, rep delineated. 8.9 Muscle Muscle - Skeletal 0011907 466 659 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.99403 853877 0.979215 0.995215 0.857737 21125 1 76 0.00180258 212 0 8.97832e+07 0.020473 284200 9.02149e+07 4.54534e+06 21143 4.47169e+07 0 0.121477 0.995215 0.853633 8.97832e+07 0.00240986 1.95671e+07 8.30793e+06 1.97477e+07 211 1.98798e+07 2.10083e+07 0.00210586 1.95335e+07 49.5607 0.00315026 0.9964 0 50.2296 GTEX-1R9K4-0002-SM-DE1JP B1 Blood Whole Blood 0013756 954 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9K4-0002-SM-DLIQI B1 Blood Whole Blood 0013756 954 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9K4-0006-SM-CYPRM B1 6.8 Blood Whole Blood 0013756 954 BP-69363 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.974049 567490 0.981396 0.974683 0.808738 16089 1 76 0.00227164 141 0 1.11507e+08 0.0169578 263104 1.14403e+08 8.31585e+06 16092 5.55228e+07 0 0.172658 0.974683 0.788263 1.11507e+08 0.00270087 2.67723e+07 2.0414e+08 2.67981e+07 193 2.68498e+07 3.20936e+07 0.00248611 2.6811e+07 49.9638 0.0022998 0.975317 0 50.0242 GTEX-1R9K4-0011-R11a-SM-EZ6N9 B1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 1140 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989015 436243 0.956451 0.99091 0.80936 23568 1 76 0.00268099 373 0 1.05273e+08 0.0432302 4.56019e+06 1.06239e+08 8.30799e+06 23598 5.24066e+07 0 0.147091 0.99091 0.802003 1.05273e+08 0.00402264 2.29038e+07 1.46446e+07 2.31668e+07 338 2.31285e+07 1.19489e+07 0.00335053 2.31121e+07 49.9822 0.0429239 0.992806 0 50.2854 GTEX-1R9K4-0011-R5b-SM-EZ6N8 B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1140 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990864 451164 0.965539 0.992736 0.857532 23931 1 76 0.00254733 372 0 9.63204e+07 0.0341533 5.58238e+06 9.70252e+07 7.42389e+06 23949 4.79712e+07 0 0.108008 0.992736 0.851303 9.63204e+07 0.00396344 2.1071e+07 1.6165e+07 2.13989e+07 335 2.1344e+07 1.15044e+07 0.00325405 2.12795e+07 49.9242 0.0575354 0.994608 0 50.386 GTEX-1R9K4-0126-SM-DTX9X 1 B1 6 pieces; psoriasiform epidermal hyperplasia; epidermis over 200 microns thick; stasis dermatitis and dermal fibrosis and vascular accentuation with scar/keloid like features; possible dermal mucin (sample from the right leg) 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1013 1112 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.989216 1.07309e+06 0.977209 0.991366 0.808072 22918 1 76 0.00204836 139 0 6.863e+07 0.0225162 219704 6.92278e+07 3.23384e+06 22940 3.40707e+07 0 0.169137 0.991366 0.801095 6.863e+07 0.00256246 1.55723e+07 8.8044e+06 1.54191e+07 152 1.58141e+07 1.37255e+07 0.00230485 1.53184e+07 49.2038 0.00317364 0.993515 0 49.7529 GTEX-1R9K4-0326-SM-EVYBQ 1 B1 2 pieces; rim of external fat (outlined) 7.6 Nerve Nerve - Tibial 0001323 1018 1107 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990136 365850 0.970849 0.990697 0.763992 23845 1 76 0.00209308 221 0 8.91235e+07 0.0287822 247287 8.99604e+07 3.94444e+06 23883 4.44188e+07 0 0.206857 0.990697 0.756884 8.91235e+07 0.00303853 1.9624e+07 7.75184e+06 1.984e+07 210 1.98017e+07 1.5169e+07 0.00256554 1.97141e+07 49.8892 0.00274884 0.991257 0 50.2738 GTEX-1R9K4-0526-SM-E76P1 1 B1 1 piece; 60% glandular ductal elements and 40% fibrovascular tissue, fat and muscle 8.1 Salivary Gland Minor Salivary Gland 0006330 1017 1108 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.991362 599646 0.980408 0.992637 0.85619 23886 1 76 0.002278 383 0 1.1395e+08 0.0186947 479408 1.14796e+08 6.22055e+06 23915 5.67202e+07 0 0.124218 0.992637 0.849886 1.1395e+08 0.00292252 2.59812e+07 2.67423e+07 2.62954e+07 354 2.64685e+07 2.21405e+07 0.00259985 2.59476e+07 49.5031 0.00417618 0.993912 0 50.3005 GTEX-1R9K4-0626-SM-E76OZ 1 B1 2 pieces; 20% and 10% internal fibrovascular and fatty tissue 8 Muscle Muscle - Skeletal 0011907 1026 1099 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993104 581657 0.984427 0.994575 0.876119 20936 1 76 0.00175299 376 0 1.14263e+08 0.0153268 1.48906e+06 1.14886e+08 7.12938e+06 20955 5.6922e+07 0 0.108308 0.994575 0.871366 1.14263e+08 0.00250113 2.51092e+07 1.16618e+07 2.542e+07 339 2.54926e+07 2.48984e+07 0.0021265 2.51824e+07 49.6939 0.0129612 0.996046 0 50.3075 GTEX-1R9K4-0726-SM-EWRN2 1 B1 2 pieces; interstitial fibrosis and variably sized micro nodules; focal calcification (outlined) 6.1 Thyroid Thyroid 0002046 1032 1093 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985411 208105 0.9693 0.988376 0.693178 22993 1 76 0.00263171 123 0 6.46923e+07 0.0304064 292959 6.54531e+07 4.64573e+06 23031 3.21661e+07 0 0.276122 0.988376 0.685121 6.46923e+07 0.0033023 1.41969e+07 9.29836e+06 1.43519e+07 134 1.43929e+07 8.76968e+06 0.00295816 1.43335e+07 49.8967 0.00447586 0.991342 0 50.2715 GTEX-1R9K4-1026-SM-EXUT1 1 B1 2 pieces; congestion 9.6 Heart Heart - Atrial Appendage 0006631 1046 1079 BP-81912 RNA Extraction from Paxgene-derived Lysate Plate Based 01/04/2017 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.977369 103087 0.977701 0.977944 0.804712 21488 1 76 0.00191442 156 0 6.55066e+07 0.0219494 3.13614e+06 6.6984e+07 2.01092e+06 21504 3.26507e+07 0 0.172989 0.977944 0.786963 6.55066e+07 0.00234528 1.42595e+07 6.10127e+06 1.44195e+07 172 1.4324e+07 9.38371e+06 0.00212973 1.437e+07 50.0802 0.0468191 0.978518 0 50.279 GTEX-1R9K4-1126-SM-E9J4G 1 B1 2 pieces; atherosclerotic plaque and medial calcification narrowing the lumen by ~50%; attached adventitia and fat, ~50% of tissue (outlined) 6.7 Blood Vessel Artery - Coronary 0001621 1066 1059 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.980427 364902 0.980864 0.981395 0.774855 23122 1 76 0.00213277 216 0 9.15373e+07 0.0187596 1.39506e+06 9.32726e+07 4.60853e+06 23157 4.55795e+07 0 0.206009 0.981395 0.760439 9.15373e+07 0.00289866 2.03666e+07 1.07943e+07 2.06119e+07 233 2.05379e+07 1.46211e+07 0.00251534 2.05292e+07 49.9894 0.0149568 0.982363 0 50.2993 GTEX-1R9K4-1326-SM-DTX8G 1 B1 2 pieces; interstitial fibrosis 6.9 Heart Heart - Left Ventricle 0006566 1068 1057 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990087 847296 0.985662 0.992271 0.853523 21741 1 76 0.00202968 371 0 1.05114e+08 0.0141117 4.86303e+06 1.05933e+08 5.20269e+06 21757 5.22313e+07 0 0.13214 0.992271 0.846925 1.05114e+08 0.00240872 2.35467e+07 1.68707e+07 2.34578e+07 372 2.39553e+07 1.6723e+07 0.00221878 2.325e+07 49.2529 0.0459065 0.994454 0 49.9055 GTEX-1R9K4-1426-SM-DPRY4 1 B1 2 pieces; lobulated mature adipose tissue with fibrovascular component 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1068 1057 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.990977 266023 0.975085 0.992303 0.763284 22801 1 76 0.00285731 142 0 6.89217e+07 0.0244436 866757 6.94563e+07 3.55918e+06 22826 3.42887e+07 0 0.211801 0.992303 0.757409 6.89217e+07 0.00313662 1.51873e+07 8.03017e+06 1.53925e+07 163 1.53632e+07 9.78548e+06 0.00299678 1.53067e+07 49.908 0.0124792 0.993629 0 50.3356 GTEX-1R9K4-1526-SM-DPRY5 1 B1 2 pieces; thick capsule included (arrows); congestion 5.6 Spleen Spleen 0002106 1071 1054 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.990745 257466 0.972742 0.99185 0.744176 23043 1 76 0.0031335 136 0 6.89141e+07 0.0263925 497540 6.94803e+07 3.20751e+06 23072 3.42662e+07 0 0.228566 0.99185 0.738111 6.89141e+07 0.00341071 1.52889e+07 9.92368e+06 1.54132e+07 151 1.53898e+07 1.05566e+07 0.00327195 1.53913e+07 50.0024 0.00716088 0.992956 0 50.2024 GTEX-1R9K4-1826-SM-EVYBP 1 B1 6 pieces; well trimmed target muscularis 6.9 Esophagus Esophagus - Muscularis 0004648 1089 1036 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989544 237663 0.973495 0.990018 0.793144 23076 1 76 0.00210892 209 0 9.29373e+07 0.0262325 939376 9.38744e+07 4.48429e+06 23102 4.63101e+07 0 0.180351 0.990018 0.785227 9.29373e+07 0.00308019 1.9976e+07 7.63346e+06 2.02365e+07 245 2.01279e+07 1.52571e+07 0.00259432 2.01336e+07 50.007 0.0100067 0.990492 0 50.3238 GTEX-1R9K4-1926-SM-DPRZW 1 B1 6 pieces; stratified squamous epithelium ~0.5mm thick; submucosal glands (outlined) 7 Esophagus Esophagus - Mucosa 0006920 1085 1040 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994428 151826 0.970744 0.995059 0.729154 21157 1 76 0.00211097 108 0 4.77854e+07 0.0290862 585508 4.80226e+07 2.84150e+06 21173 2.38181e+07 0 0.24159 0.995059 0.725552 4.77854e+07 0.00263685 1.06932e+07 5.41432e+06 1.07767e+07 112 1.07421e+07 7.03376e+06 0.00237374 1.07579e+07 50.0368 0.0121923 0.995691 0 50.1944 GTEX-1R9K4-2326-SM-E6CRB 2 B1 6 pieces; autolyzed mucosa, preserved muscularis and residual target lymphoid aggregates 5.5 Small Intestine Small Intestine - Terminal Ileum 0001211 1095 1030 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990801 255126 0.969026 0.992215 0.753991 25421 1 76 0.00246675 284 0 1.22643e+08 0.0305241 508972 1.23605e+08 1.98852e+07 25486 6.10278e+07 0 0.215034 0.992215 0.748122 1.22643e+08 0.00337139 2.71502e+07 1.55341e+07 2.67614e+07 321 2.67148e+07 2.08915e+07 0.00291842 2.73633e+07 50.5996 0.00411772 0.993629 0 49.6395 GTEX-1R9K4-2826-SM-DTX8F 1 B1 6 pieces; essentially well trimmed skin with focal internal fat (outlined); ~45 micron thick epidermis 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1118 1007 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990463 820541 0.97731 0.99244 0.775396 22817 1 76 0.00219024 173 0 7.44895e+07 0.0224383 509488 7.5057e+07 3.52574e+06 22845 3.70252e+07 0 0.201914 0.99244 0.769534 7.44895e+07 0.00260443 1.65556e+07 7.71125e+06 1.64978e+07 175 1.67492e+07 1.20783e+07 0.00239692 1.64428e+07 49.5384 0.00678802 0.994416 0 49.9126 GTEX-1R9K4-2926-SM-DPRY3 1 B1 1 piece; 20% neurohypophysis and 80% adenohypophysis 6.1 Pituitary Pituitary 0000007 1373 752 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993982 167330 0.967946 0.994864 0.759582 23156 1 76 0.00207267 112 0 4.81634e+07 0.0318434 405494 4.8412e+07 2.69935e+06 23174 2.39936e+07 0 0.208363 0.994864 0.755681 4.81634e+07 0.00293669 1.04934e+07 6.07836e+06 1.06247e+07 117 1.059e+07 6.68738e+06 0.0025043 1.05678e+07 49.9476 0.00837589 0.995745 0 50.3108 GTEX-1R9K4-3126-SM-DTX9Y 1 B1 4 fragmented pieces; mild to moderate autolysis; attached small fragments of meninges outlined 6.2 Brain Brain - Cortex 0001870 1374 751 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990323 833923 0.967864 0.992663 0.837019 23182 1 76 0.00212031 203 0 7.35889e+07 0.0318232 3.73037e+06 7.41327e+07 3.5553e+06 23199 3.65585e+07 0 0.130845 0.992663 0.830878 7.35889e+07 0.00258581 1.62534e+07 1.12838e+07 1.6291e+07 227 1.64891e+07 8.57333e+06 0.00235251 1.6202e+07 49.5608 0.0503201 0.995004 0 50.0578 GTEX-1R9K5-0002-SM-DCXS2 B1 Blood Whole Blood 0013756 -55 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9K5-0002-SM-DLIP5 B1 Blood Whole Blood 0013756 -55 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9K5-0006-SM-DO939 B1 8.6 Blood Whole Blood 0013756 -55 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.987611 1.11677e+06 0.953154 0.988236 0.802009 18096 1 76 0.00186196 134 0 9.02451e+07 0.0464433 266525 9.13194e+07 4.8762e+06 18101 4.49814e+07 0 0.151145 0.988236 0.792575 9.02451e+07 0.00237133 2.02264e+07 9.65914e+07 2.03431e+07 164 2.03573e+07 2.16945e+07 0.00211649 2.0296e+07 49.9245 0.0029186 0.988862 0 50.1438 GTEX-1R9K5-0226-SM-EWRNF 0 B1 2 pieces, ~5-10% fascia/vascular elements; rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 395 570 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98955 263188 0.97457 0.992009 0.808332 23995 1 76 0.0024541 217 0 9.0061e+07 0.0250751 180275 9.07864e+07 5.9572e+06 24027 4.48263e+07 0 0.166238 0.992009 0.801873 9.0061e+07 0.0029248 1.97005e+07 7.73638e+06 1.99234e+07 242 1.99476e+07 1.71019e+07 0.00268336 1.98695e+07 49.902 0.0019857 0.994468 0 50.2813 GTEX-1R9K5-0326-SM-EWRNG 0 B1 2 pieces, fragemented; ~5-10% interstitial fat/vascular elements; rep delineated 7.2 Muscle Muscle - Skeletal 0011907 398 567 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98962 387206 0.980521 0.992215 0.856233 22673 1 76 0.00229741 279 0 1.08621e+08 0.0191918 787328 1.09473e+08 7.67583e+06 22694 5.4075e+07 0 0.124288 0.992215 0.849567 1.08621e+08 0.00280464 2.33894e+07 9.71486e+06 2.3645e+07 300 2.36922e+07 2.34672e+07 0.00254442 2.35737e+07 49.8746 0.00719196 0.99481 0 50.2717 GTEX-1R9K5-0426-SM-E8VOV 0 B1 2 pieces, partial rim of trace adherent fat, up to ~0.3mm 7.5 Nerve Nerve - Tibial 0001323 390 575 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.987304 349067 0.969341 0.988338 0.774888 24677 1 76 0.00180892 290 0 9.95121e+07 0.0303365 237766 1.00686e+08 5.26768e+06 24718 4.95689e+07 0 0.194453 0.988338 0.765852 9.95121e+07 0.00230246 2.19163e+07 7.32126e+06 2.20593e+07 266 2.20295e+07 1.69347e+07 0.00205543 2.20447e+07 50.0173 0.00236145 0.989372 0 50.1626 GTEX-1R9K5-0526-SM-DTXF9 0 B1 2 pieces, no significant atherosis or adherent fat; focal Monckeberg sclerosis, encircled 8.4 Blood Vessel Artery - Tibial 0007610 393 572 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.995558 467569 0.975207 0.99601 0.834426 21991 1 76 0.00199361 223 0 8.90262e+07 0.0243282 232090 8.93828e+07 4.25794e+06 22014 4.43782e+07 0 0.140781 0.99601 0.831096 8.90262e+07 0.00222705 1.92508e+07 5.95404e+06 1.93538e+07 247 1.94115e+07 1.83154e+07 0.00211028 1.92321e+07 49.7679 0.00259658 0.996462 0 50.1334 GTEX-1R9K5-0626-SM-DPRZB 0 B1 2 pieces, ~80% glandular elements, delineated 8.6 Salivary Gland Minor Salivary Gland 0006330 407 558 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994049 226195 0.9729 0.994717 0.798713 23765 1 76 0.00219097 139 0 6.39576e+07 0.0261671 184811 6.42973e+07 3.42113e+06 23795 3.1859e+07 0 0.174187 0.994717 0.794494 6.39576e+07 0.00267789 1.41815e+07 5.86742e+06 1.42687e+07 141 1.42613e+07 1.21836e+07 0.00243426 1.42266e+07 49.9391 0.00287432 0.995385 0 50.1533 GTEX-1R9K5-0726-SM-EAZ4E 1 B1 2 pieces, micronodular goitre; ~1mm colloid cyst noted 6.3 Thyroid Thyroid 0002046 414 551 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989885 295968 0.959482 0.990671 0.722239 23695 1 76 0.00223553 116 0 5.93323e+07 0.0401951 121232 5.9891e+07 4.94247e+06 23726 2.95515e+07 0 0.237243 0.990671 0.715501 5.93323e+07 0.00310168 1.28812e+07 4.99382e+06 1.29377e+07 126 1.29332e+07 9.2146e+06 0.00266826 1.29317e+07 49.997 0.00202421 0.991458 0 50.1094 GTEX-1R9K5-1026-SM-EAZ4F 1 B1 6 pieces, mucosa very well preserved, valuable specimen, up to ~1mm, 30-90% of thickness 5.6 Stomach Stomach 0000945 481 484 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517,LCSET-10947 05/01/2017 TruSeq.v1 RNASEQ 0.985569 454079 0.976981 0.987404 0.826114 25421 1 76 0.00203315 439 0 1.57125e+08 0.0226643 1.44923e+06 1.5913e+08 1.04591e+07 25464 7.82148e+07 0 0.150867 0.987404 0.815709 1.57125e+08 0.0033489 3.56574e+07 9.33197e+07 3.58225e+07 425 3.58749e+07 3.47792e+07 0.0026898 3.58667e+07 49.9943 0.00910719 0.989239 0 50.1155 GTEX-1R9K5-1126-SM-EAZ4G 1 B1 2 pieces, no abnormalities 6.7 Spleen Spleen 0002106 427 538 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989107 336276 0.962523 0.989722 0.797569 24319 1 76 0.00262378 212 0 8.61104e+07 0.0361807 243147 8.70046e+07 7.16224e+06 24351 4.28726e+07 0 0.164953 0.989722 0.789372 8.61104e+07 0.00320203 1.88977e+07 1.41987e+07 1.90373e+07 222 1.89899e+07 1.47338e+07 0.00291273 1.90013e+07 50.015 0.00279465 0.990337 0 50.1839 GTEX-1R9K5-1226-SM-E6CPQ 1 B1 2 pieces. ductal proliferation and fibrosis consistent with prior pancreatitis (rep foci ensquared); islets fairly well preserved, rep encircled. Reviewed by PRC consensus. 8.2 Pancreas Pancreas 0001150 448 517 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992377 463400 0.979696 0.994257 0.850132 23556 1 76 0.00246627 128 0 9.03256e+07 0.0198977 235267 9.08473e+07 1.6073e+07 23579 4.49473e+07 0 0.129565 0.994257 0.845249 9.03256e+07 0.00349027 2.06145e+07 2.27806e+07 2.06389e+07 148 2.06718e+07 2.55604e+07 0.0029773 2.07376e+07 50.0795 0.0025897 0.996136 0 50.0296 GTEX-1R9K5-1326-SM-E6CPR 1 B1 2 pieces, moderate interstitial fibrosis/chronic ischemic change 7.9 Heart Heart - Left Ventricle 0006566 444 521 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992662 592202 0.980743 0.994557 0.856143 21849 1 76 0.00251571 267 0 9.32891e+07 0.0190289 2.12131e+06 9.37997e+07 1.53597e+07 21867 4.64283e+07 0 0.1246 0.994557 0.851483 9.32891e+07 0.00351823 2.04739e+07 1.30955e+07 2.06453e+07 285 2.07169e+07 1.56985e+07 0.00301602 2.05165e+07 49.7571 0.0226153 0.996453 0 50.2084 GTEX-1R9K5-1426-SM-DTX9F 1 B1 6 pieces. atherosis up to ~0.2mm 8.3 Blood Vessel Artery - Aorta 0001496 443 522 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.980869 690389 0.972273 0.982695 0.809587 22546 1 76 0.00226317 198 0 8.91673e+07 0.0272424 196831 9.07375e+07 3.99716e+06 22574 4.42957e+07 0 0.162686 0.982695 0.795577 8.91673e+07 0.00260026 1.925e+07 8.52444e+06 1.92451e+07 203 1.94332e+07 1.76588e+07 0.0024314 1.92126e+07 49.7146 0.00216924 0.984521 0 49.9937 GTEX-1R9K5-1526-SM-DPRZA 1 B1 4 pieces, squamous mucosa up to ~0.4mm, ~30% thickness 9.7 Esophagus Esophagus - Mucosa 0006920 468 497 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993633 307396 0.975284 0.994437 0.820357 21585 1 76 0.00207014 130 0 5.53596e+07 0.0244016 192719 5.56693e+07 3.10384e+06 21599 2.75818e+07 0 0.154927 0.994437 0.815793 5.53596e+07 0.00264482 1.24097e+07 6.49869e+06 1.24772e+07 124 1.24819e+07 1.13915e+07 0.00235725 1.2447e+07 49.9299 0.00346186 0.995241 0 50.1356 GTEX-1R9K5-1626-SM-E76QB 1 B1 6 pieces, confirmed target muscularis 8.7 Esophagus Esophagus - Muscularis 0004648 471 494 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993436 433321 0.97439 0.994882 0.827825 24578 1 76 0.00188998 299 0 1.29956e+08 0.0252287 638450 1.30625e+08 8.08116e+06 24617 6.47516e+07 0 0.146565 0.994882 0.823588 1.29956e+08 0.00277679 2.81304e+07 1.05808e+07 2.83468e+07 324 2.84144e+07 2.52765e+07 0.00233274 2.82325e+07 49.8395 0.00488766 0.996328 0 50.1916 GTEX-1R9K5-1726-SM-EVR49 1 B1 6 pieces, confirmed target muscularis 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 460 505 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990651 279949 0.973043 0.992315 0.818401 24008 1 76 0.00224821 292 0 1.1999e+08 0.026607 562706 1.2092e+08 8.50577e+06 24044 5.97541e+07 0 0.154642 0.992315 0.812111 1.1999e+08 0.00324423 2.58415e+07 9.98172e+06 2.60644e+07 312 2.60284e+07 2.22632e+07 0.00274538 2.60532e+07 50.0239 0.00465356 0.993978 0 50.2148 GTEX-1R9K5-2026-SM-E6CPS 2 B1 4 pieces. target lymphoid aggregates are ~40% of tissue 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 508 457 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990857 378342 0.970183 0.992761 0.816241 25320 1 76 0.00288995 159 0 7.55612e+07 0.0280121 216624 7.61122e+07 1.37139e+07 25350 3.75366e+07 0 0.153942 0.992761 0.810332 7.55612e+07 0.00387231 1.67124e+07 8.44873e+06 1.65287e+07 169 1.65765e+07 1.35676e+07 0.00338019 1.6797e+07 50.3303 0.00284611 0.994665 0 49.7237 GTEX-1R9K5-2126-SM-E8VN1 1 B1 6 pieces, mucosa up to ~0.5mm-variably fixed, mainly score 1, focal areas score 2 with gland sloughing 8.2 Colon Colon - Transverse 0001157 494 471 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988914 516881 0.974111 0.990153 0.824419 23035 1 76 0.00173821 175 0 7.39701e+07 0.0254995 236110 7.47057e+07 3.5797e+06 23056 3.6843e+07 0 0.149692 0.990153 0.816301 7.39701e+07 0.00229341 1.61877e+07 6.17258e+06 1.63391e+07 171 1.63359e+07 1.45289e+07 0.00201546 1.62774e+07 49.9103 0.00316053 0.991392 0 50.2328 GTEX-1R9K5-2226-SM-DTX9G 1 B1 6 pieces, confirmed target muscularis 8.3 Colon Colon - Sigmoid 0001159 504 461 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991298 960699 0.977335 0.993566 0.849349 22011 1 76 0.00187579 178 0 7.57236e+07 0.0223036 344613 7.6214e+07 3.3726e+06 22026 3.76477e+07 0 0.127986 0.993566 0.843883 7.57236e+07 0.00241165 1.65149e+07 5.66232e+06 1.65064e+07 178 1.67158e+07 1.53581e+07 0.00214311 1.64622e+07 49.6179 0.00452165 0.995833 0 49.987 GTEX-1R9K5-2326-SM-DPRZC 1 B1 2 pieces, spermatogenesis is present 7.4 Testis Testis 0000473 508 457 BP-78507 RNA Extraction from Paxgene-derived Lysate Plate Based 09/15/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992834 369170 0.934197 0.99367 0.73527 32270 1 76 0.00204364 144 0 6.95496e+07 0.0654763 549565 6.99927e+07 3.73773e+06 32321 3.46574e+07 0 0.198927 0.99367 0.730616 6.95496e+07 0.00268485 1.45176e+07 7.79512e+06 1.45927e+07 140 1.46185e+07 1.20102e+07 0.00236398 1.45413e+07 49.8675 0.00785175 0.994506 0 50.129 GTEX-1R9PM-0001-SM-DE1JJ B1 Blood Whole Blood 0013756 -43 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9PM-0001-SM-DLIQD B1 Blood Whole Blood 0013756 -43 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9PM-0006-SM-CYPTI B1 7.6 Blood Whole Blood 0013756 -43 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.989283 733398 0.958653 0.99017 0.810388 19069 1 76 0.00270081 134 0 7.52277e+07 0.0407755 417964 7.59745e+07 5.37303e+06 19080 3.74682e+07 0 0.148266 0.99017 0.802422 7.52277e+07 0.00338136 1.67241e+07 5.8819e+07 1.68454e+07 143 1.68467e+07 1.71319e+07 0.00304078 1.68087e+07 49.9436 0.00550137 0.991057 0 50.1807 GTEX-1R9PM-0126-SM-DPRY6 1 B1 2 pieces, no abnormalities 6.5 Spleen Spleen 0002106 124 617 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.992386 265682 0.965271 0.993446 0.783327 23689 1 76 0.00283348 141 0 6.94288e+07 0.0341707 659810 6.98868e+07 3.29532e+06 23711 3.45497e+07 0 0.181944 0.993446 0.778193 6.94288e+07 0.00317967 1.52612e+07 6.98841e+06 1.54022e+07 165 1.53618e+07 1.02703e+07 0.00300639 1.53713e+07 50.0154 0.00944112 0.994506 0 50.2299 GTEX-1R9PM-0226-SM-DPRY7 1 B1 2 pieces, nodular goitre; regressive changes 7.1 Thyroid Thyroid 0002046 967 1214 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993683 237244 0.961632 0.994537 0.747197 22962 1 76 0.00201698 116 0 5.11353e+07 0.0380957 101516 5.14162e+07 2.9311e+06 22995 2.54703e+07 0 0.214435 0.994537 0.743115 5.11353e+07 0.00275879 1.10818e+07 4.76679e+06 1.11834e+07 118 1.1165e+07 8.28451e+06 0.00238756 1.11436e+07 49.9518 0.0019744 0.995391 0 50.2283 GTEX-1R9PM-0326-SM-EVYBI 1 B1 6 pieces, adherent serosa/fat up to ~1mm 6.6 Blood Vessel Artery - Aorta 0001496 969 1212 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.987147 288743 0.976115 0.987639 0.838604 21493 1 76 0.00192778 152 0 6.86687e+07 0.0234751 207676 6.95282e+07 3.17063e+06 21509 3.42114e+07 0 0.137511 0.987639 0.828238 6.86687e+07 0.00308899 1.48156e+07 5.46828e+06 1.49714e+07 163 1.49012e+07 1.36436e+07 0.0025081 1.49253e+07 50.0404 0.00298693 0.98813 0 50.2615 GTEX-1R9PM-0426-SM-EVR3P 1 B1 2 pieces, trace congestion 8 Lung Lung 0008952 972 1209 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989749 386129 0.975356 0.991509 0.82539 26307 1 76 0.00257939 381 0 1.34897e+08 0.0238632 248740 1.36052e+08 1.03546e+07 26353 6.71346e+07 0 0.149966 0.991509 0.818382 1.34897e+08 0.00366414 2.99553e+07 1.37289e+07 3.024e+07 331 3.02392e+07 2.68311e+07 0.0031208 3.01796e+07 49.9507 0.00182827 0.993269 0 50.2364 GTEX-1R9PM-0926-SM-DPRYA 1 B1 6 pieces, squamous mucosa up to ~0.4mm, ~10-20% thickness. Few submucosal mucus glands present, rep encircled 9 Esophagus Esophagus - Mucosa 0006920 1001 1180 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994031 262934 0.975717 0.994819 0.811366 21206 1 76 0.00201132 123 0 5.49168e+07 0.024065 232990 5.52028e+07 2.94088e+06 21218 2.73704e+07 0 0.164351 0.994819 0.807162 5.49168e+07 0.00262305 1.23599e+07 7.44577e+06 1.24299e+07 123 1.24347e+07 1.09563e+07 0.00231694 1.23953e+07 49.9207 0.00422062 0.995607 0 50.1413 GTEX-1R9PM-1026-SM-EVR3N 1 B1 6 pieces, confirmed target muscularis 7.3 Esophagus Esophagus - Muscularis 0004648 1005 1176 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988617 254913 0.970724 0.99057 0.81025 23916 1 76 0.00229 277 0 1.02075e+08 0.0290588 1.18522e+06 1.03047e+08 7.6427e+06 23945 5.08146e+07 0 0.160475 0.99057 0.802609 1.02075e+08 0.00360504 2.20753e+07 1.03844e+07 2.23451e+07 307 2.22558e+07 1.52279e+07 0.00294623 2.2344e+07 50.0988 0.0115017 0.992522 0 50.3037 GTEX-1R9PM-1126-SM-E76OX 1 B1 "5 pieces, confirmed target muscularis; ~10% ""contaminant"" mucosa, rep delineated" 5.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 1013 1168 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992094 344480 0.970785 0.993575 0.81374 23366 1 76 0.0019785 199 0 7.91174e+07 0.0289956 1.07802e+06 7.96291e+07 5.0134e+06 23390 3.93866e+07 0 0.157045 0.993575 0.808512 7.91174e+07 0.0030205 1.72718e+07 8.80452e+06 1.7437e+07 213 1.74537e+07 1.18295e+07 0.00249872 1.73636e+07 49.8706 0.013538 0.995055 0 50.238 GTEX-1R9PM-1526-SM-DPRY8 1 B1 6 pieces, target mucosa up to ~0.4mm, 15-20% thickness 6.4 Colon Colon - Transverse 0001157 1027 1154 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994254 144358 0.970557 0.994991 0.793713 23195 1 76 0.00206963 127 0 5.5687e+07 0.0290789 739468 5.59673e+07 3.07704e+06 23225 2.77498e+07 0 0.176844 0.994991 0.789737 5.5687e+07 0.0026976 1.22321e+07 6.10483e+06 1.24402e+07 140 1.2371e+07 7.80881e+06 0.00238339 1.23343e+07 49.9256 0.0132125 0.995728 0 50.4216 GTEX-1R9PM-1626-SM-DPRY9 1 B1 6 pieces, target lymphoid aggregates up to ~25% of tissue, rep delineated 6.4 Small Intestine Small Intestine - Terminal Ileum 0001211 1025 1156 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10500,LCSET-10685 03/22/2017 TruSeq.v1 RNASEQ 0.993321 161820 0.971981 0.994405 0.806036 24127 1 76 0.00265778 159 0 7.19527e+07 0.0277077 443124 7.23576e+07 3.61777e+06 24152 3.58368e+07 0 0.165945 0.994405 0.801526 7.19527e+07 0.00287998 1.57701e+07 6.08451e+06 1.59365e+07 174 1.58578e+07 1.16661e+07 0.00276876 1.59215e+07 50.1002 0.00612409 0.995489 0 50.2623 GTEX-1R9PM-1726-SM-E8VOA 1 B1 3 pieces (fragmented), target glandular elements ~70% of tissue, delineated; rest is stroma 7.5 Salivary Gland Minor Salivary Gland 0006330 1032 1149 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.988711 794969 0.978468 0.991193 0.86009 24956 1 76 0.00217259 332 0 1.46972e+08 0.0210268 737865 1.48278e+08 1.18738e+07 24987 7.30997e+07 0 0.118378 0.991193 0.852515 1.46972e+08 0.00352572 3.2301e+07 1.88751e+07 3.30552e+07 328 3.33917e+07 3.29567e+07 0.00284746 3.22796e+07 49.1533 0.00497624 0.993676 0 50.577 GTEX-1R9PM-1826-SM-EVYBH 0 B1 2 pieces. mainly adipose, trace fibrous elements 6.2 Breast Breast - Mammary Tissue 0008367 1037 1144 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.986802 206455 0.974756 0.98733 0.836831 22775 1 76 0.00203087 166 0 7.02398e+07 0.024967 1.14211e+06 7.11412e+07 3.22128e+06 22794 3.50123e+07 0 0.137926 0.98733 0.826228 7.02398e+07 0.0029725 1.54006e+07 6.5823e+06 1.56538e+07 190 1.55658e+07 1.0734e+07 0.00250143 1.55238e+07 49.9325 0.0160541 0.987858 0 50.4078 GTEX-1R9PM-1926-SM-EVR3O 0 B1 6 pieces, moderate dermal fat, rep delineated; squamous epithelium is ~40-50 microns 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1040 1141 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987349 336135 0.972687 0.98943 0.804198 24405 1 76 0.00232769 298 0 1.0373e+08 0.0271121 607947 1.04838e+08 8.47404e+06 24442 5.16368e+07 0 0.168488 0.98943 0.795698 1.0373e+08 0.0036072 2.26164e+07 1.39582e+07 2.29148e+07 313 2.28643e+07 1.74767e+07 0.0029661 2.2865e+07 50.0007 0.00579891 0.991511 0 50.3277 GTEX-1R9PM-2026-SM-E76OY 0 B1 6 pieces, adherent/dermal fat, moderate, squamous epithelium is ~50-6- microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1048 1133 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.992894 464148 0.973973 0.994287 0.800492 23004 1 76 0.00194375 259 0 9.56457e+07 0.0257222 434258 9.61952e+07 6.05420e+06 23037 4.76366e+07 0 0.173481 0.994287 0.795919 9.56457e+07 0.0029252 2.06884e+07 1.18892e+07 2.07448e+07 252 2.08196e+07 1.72172e+07 0.00243379 2.07382e+07 49.902 0.00451434 0.99568 0 50.0681 GTEX-1R9PM-2126-SM-E8VOB 0 B1 2 pieces, interstitial fascia is ~10% 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 1054 1127 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.983229 273853 0.976525 0.984455 0.817731 22124 1 76 0.0018907 164 0 7.10247e+07 0.0231226 819321 7.21462e+07 3.76553e+06 22147 3.53662e+07 0 0.158795 0.984455 0.805019 7.10247e+07 0.00257825 1.5691e+07 5.96368e+06 1.57913e+07 178 1.57679e+07 1.20458e+07 0.00223405 1.57995e+07 50.0501 0.0113564 0.985681 0 50.1593 GTEX-1R9PM-2226-SM-E8VOC 0 B1 2 pieces, adherent/interstitial fat/vascular elements is ~20% of tissue 7.3 Muscle Muscle - Skeletal 0011907 1060 1121 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.99125 299812 0.98129 0.992379 0.868342 19850 1 76 0.00147534 210 0 8.14711e+07 0.0185009 1.60711e+06 8.20968e+07 3.78578e+06 19859 4.06162e+07 0 0.112948 0.992379 0.861724 8.14711e+07 0.00207858 1.78307e+07 6.91341e+06 1.79524e+07 220 1.7958e+07 1.61937e+07 0.00177662 1.79066e+07 49.9284 0.0195758 0.993508 0 50.17 GTEX-1R9PM-2326-SM-EWRMT 0 B1 2 pieces, trace nubbin of adherent fat, ~0.5mm 6.3 Nerve Nerve - Tibial 0001323 1068 1113 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984039 268597 0.966212 0.986929 0.767039 24293 1 76 0.00254149 212 0 8.50551e+07 0.0335183 406455 8.61815e+07 5.96894e+06 24332 4.2292e+07 0 0.199173 0.986929 0.757013 8.50551e+07 0.00336559 1.85497e+07 7.81784e+06 1.8784e+07 205 1.8788e+07 1.25709e+07 0.0029427 1.87672e+07 49.9723 0.00471626 0.989819 0 50.3138 GTEX-1R9PN-0004-SM-DE1JI B1 Blood Whole Blood 0013756 -274 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9PN-0004-SM-DLIQC B1 Blood Whole Blood 0013756 -274 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9PN-0006-SM-DTX7L B1 8.3 Blood Whole Blood 0013756 -274 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990292 1.01035e+06 0.962043 0.992158 0.830597 18934 1 76 0.00243248 149 0 8.1646e+07 0.0373885 523139 8.22913e+07 3.77410e+06 18944 4.05787e+07 0 0.131447 0.992158 0.824083 8.1646e+07 0.00297823 1.7954e+07 3.48876e+07 1.79877e+07 166 1.81858e+07 1.77816e+07 0.00270484 1.791e+07 49.618 0.00635716 0.994024 0 50.0468 GTEX-1R9PN-0226-SM-DTX84 1 B1 6 pieces; minimal plaque; 4 pieces have hemorrhage in adventitia up to 2mm thick 7.3 Blood Vessel Artery - Aorta 0001496 386 419 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990879 985674 0.976083 0.992946 0.830477 22711 1 76 0.00191707 190 0 8.47647e+07 0.0235609 381597 8.53669e+07 4.00002e+06 22733 4.21283e+07 0 0.145606 0.992946 0.824618 8.47647e+07 0.00235879 1.84309e+07 5.9584e+06 1.84619e+07 213 1.86893e+07 1.56031e+07 0.00213747 1.83656e+07 49.5632 0.00447008 0.995013 0 50.042 GTEX-1R9PN-0326-SM-DTX85 1 B1 2 pieces, 1 fragmented; ducts and lobules present 7 Breast Breast - Mammary Tissue 0008367 387 418 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.99043 878492 0.973569 0.992453 0.811737 24313 1 76 0.00204841 174 0 8.30348e+07 0.0256746 385537 8.36662e+07 3.42832e+06 24348 4.12563e+07 0 0.161832 0.992453 0.805611 8.30348e+07 0.00242319 1.84065e+07 7.24467e+06 1.83775e+07 200 1.86238e+07 1.52372e+07 0.00223541 1.83168e+07 49.5845 0.00460804 0.994476 0 49.9606 GTEX-1R9PN-0426-SM-DTXDT 0 B1 4 pieces; well trimmed; dermal fat 5% 5.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 390 415 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993703 705871 0.97269 0.994782 0.795871 23920 1 76 0.00194808 380 0 1.04741e+08 0.0271386 1.21355e+06 1.05291e+08 5.16952e+06 23951 5.21933e+07 0 0.176819 0.994782 0.791719 1.04741e+08 0.00255982 2.31524e+07 1.26819e+07 2.32779e+07 337 2.33186e+07 1.63846e+07 0.00225362 2.32166e+07 49.8903 0.0115257 0.995862 0 50.1352 GTEX-1R9PN-0526-SM-DTX86 1 B1 2 pieces; proliferative endometrium 10%, with endometrial hyperplastic polyp, 30%; myometrium comprises 60% 7.4 Uterus Uterus 0000995 391 414 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.991506 776340 0.970357 0.993405 0.782575 23313 1 76 0.00203095 167 0 7.86349e+07 0.0293758 373209 7.91569e+07 3.41701e+06 23341 3.91055e+07 0 0.187782 0.993405 0.777414 7.86349e+07 0.00240781 1.71922e+07 5.85602e+06 1.71983e+07 184 1.73339e+07 1.32218e+07 0.00221902 1.71964e+07 49.8009 0.0047148 0.995305 0 50.0089 GTEX-1R9PN-0626-SM-E6CR9 1 B1 2 pieces; variety of cysts: follicular, corpus luteum, albicans 5.7 Ovary Ovary 0000992 393 412 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990351 287005 0.963145 0.992224 0.702582 23234 1 76 0.00235971 126 0 6.45629e+07 0.0366575 302027 6.50689e+07 1.14468e+07 23274 3.21131e+07 0 0.260563 0.992224 0.697119 6.45629e+07 0.0035523 1.42547e+07 7.11861e+06 1.41208e+07 137 1.41376e+07 9.27223e+06 0.00295488 1.43542e+07 50.38 0.00464165 0.994096 0 49.7641 GTEX-1R9PN-1026-SM-DTX87 1 B1 6 pieces; well dissected muscularis except for a 0.4mm focus of epithelium in 1 [circled] 8.2 Esophagus Esophagus - Muscularis 0004648 399 406 BP-78670 RNA Extraction from Paxgene-derived Lysate Plate Based 09/21/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990746 1.0897e+06 0.977833 0.993022 0.839742 22637 1 76 0.00180613 211 0 8.69567e+07 0.0218727 555088 8.75677e+07 4.12862e+06 22655 4.32089e+07 0 0.138091 0.993022 0.833882 8.69567e+07 0.00230726 1.89569e+07 6.66565e+06 1.89481e+07 225 1.9193e+07 1.61581e+07 0.00205612 1.88958e+07 49.6099 0.00633896 0.995297 0 49.9883 GTEX-1R9PN-1826-SM-E8VO4 1 B1 2 pieces; 1 piece has a large fatty band between 2 muscle bundles 8 Muscle Muscle - Skeletal 0011907 413 392 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.991442 1.29508e+06 0.983839 0.993677 0.881137 21751 1 76 0.00182624 288 0 1.77099e+08 0.0158939 1.30848e+06 1.78225e+08 1.29654e+07 21770 8.81283e+07 0 0.102702 0.993677 0.875565 1.77099e+08 0.00293401 3.85302e+07 1.63741e+07 3.8912e+07 318 3.93027e+07 4.04057e+07 0.00237888 3.84638e+07 49.4606 0.00734169 0.995911 0 50.2464 GTEX-1R9PN-1926-SM-E8VO5 1 B1 2 pieces; 1 with several edematous nerve bundles 6.5 Nerve Nerve - Tibial 0001323 414 391 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.982699 352647 0.971194 0.98396 0.794411 23831 1 76 0.00172915 223 0 9.2586e+07 0.0285057 541231 9.40954e+07 4.80463e+06 23867 4.61215e+07 0 0.176782 0.98396 0.781669 9.2586e+07 0.00248631 2.04023e+07 7.96409e+06 2.05633e+07 255 2.04748e+07 1.51414e+07 0.00210725 2.0604e+07 50.1573 0.00575194 0.985221 0 50.1965 GTEX-1R9PO-0004-SM-DCXR6 B1 Blood Whole Blood 0013756 1041 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1R9PO-0004-SM-DLIQO B1 Blood Whole Blood 0013756 1041 BP-69352 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/23/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1R9PO-0006-SM-DO937 B1 7.7 Blood Whole Blood 0013756 1041 BP-69362 RNA isolation_PAXgene Blood RNA (Manual) 11/23/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.978017 388854 0.986283 0.978669 0.821539 18509 1 76 0.0020991 193 0 1.09706e+08 0.0130089 251972 1.12098e+08 6.23023e+06 18516 5.46451e+07 0 0.164744 0.978669 0.804015 1.09706e+08 0.00255571 2.59386e+07 1.44218e+08 2.60562e+07 213 2.60896e+07 3.04657e+07 0.00232726 2.59886e+07 49.9031 0.00224779 0.979322 0 50.1131 GTEX-1R9PO-0011-R11b-SM-EZ6NB B1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 1040 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991566 246490 0.959434 0.992947 0.790372 23638 1 76 0.00252014 206 0 8.08118e+07 0.0400231 1.36939e+06 8.13859e+07 5.81426e+06 23666 4.02527e+07 0 0.169062 0.992947 0.784797 8.08118e+07 0.00333061 1.7796e+07 1.5261e+07 1.78591e+07 253 1.79049e+07 1.13398e+07 0.00292482 1.785e+07 49.9232 0.0168258 0.994328 0 50.0885 GTEX-1R9PO-0011-R5a-SM-EZ6NA B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 1040 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991497 312530 0.966214 0.992976 0.857011 24080 1 76 0.00243424 274 0 9.76329e+07 0.0334756 3.90082e+06 9.83236e+07 7.28558e+06 24098 4.86528e+07 0 0.109202 0.992976 0.850991 9.76329e+07 0.00343188 2.14512e+07 1.19102e+07 2.17034e+07 328 2.16424e+07 1.25951e+07 0.00293232 2.16405e+07 49.9977 0.0396733 0.994454 0 50.2922 GTEX-1R9PO-0226-SM-E6CHS 1 B1 6 pieces; ~0.7mm attached adventitia 6.6 Blood Vessel Artery - Aorta 0001496 1070 1255 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991676 315585 0.971008 0.992666 0.783945 22371 1 76 0.0021096 169 0 7.82211e+07 0.0284657 94547 7.8799e+07 4.64394e+06 22393 3.89385e+07 0 0.187063 0.992666 0.778195 7.82211e+07 0.00260142 1.68035e+07 1.12048e+07 1.69396e+07 173 1.68818e+07 1.54736e+07 0.00235526 1.69363e+07 50.0805 0.00119985 0.993656 0 50.2016 GTEX-1R9PO-0326-SM-DTXA1 1 B1 2 pieces; interstitial fibrosis; couple of small vessels with atherosis and markedly compromised lumen (outlined) 6.9 Heart Heart - Left Ventricle 0006566 1073 1252 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988262 1.01784e+06 0.982738 0.990814 0.852928 20447 1 76 0.00195432 159 0 7.14692e+07 0.0170574 3.01875e+06 7.21317e+07 3.3984e+06 20459 3.5446e+07 0 0.12981 0.990814 0.845093 7.14692e+07 0.00240594 1.59536e+07 1.02134e+07 1.58096e+07 202 1.62965e+07 1.08398e+07 0.00217954 1.5628e+07 48.9529 0.0418505 0.993367 0 49.7733 GTEX-1R9PO-0926-SM-E9U4Q 1 B1 2 pieces; lobulated mature adipose tissue 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1085 1240 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.980701 333382 0.973262 0.981551 0.772993 22266 1 76 0.0019613 148 0 6.78829e+07 0.0264258 244784 6.91588e+07 2.79031e+06 22294 3.38162e+07 0 0.200268 0.981551 0.758733 6.78829e+07 0.00284565 1.49043e+07 1.01944e+07 1.50114e+07 159 1.49661e+07 1.15388e+07 0.00240309 1.50124e+07 50.0771 0.00353945 0.982401 0 50.179 GTEX-1R9PO-1226-SM-E6CHR 1 B1 6 pieces; well trimmed target muscularis 6.6 Esophagus Esophagus - Muscularis 0004648 1095 1230 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99254 325626 0.963455 0.993718 0.774678 22993 1 76 0.00198924 138 0 7.09609e+07 0.0362326 368692 7.14094e+07 4.59458e+06 23014 3.53439e+07 0 0.188777 0.993718 0.769812 7.09609e+07 0.0024931 1.51229e+07 1.2494e+07 1.52519e+07 160 1.5183e+07 1.21633e+07 0.00224087 1.52719e+07 50.146 0.00516307 0.994897 0 50.2125 GTEX-1R9PO-1626-SM-E6CPT 2 B1 6 pieces; arterio and arteriolo nephrosclerosis (rep vessels arrowed) 6.2 Kidney Kidney - Cortex 0001225 1106 1219 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990696 421878 0.975105 0.992412 0.828956 24034 1 76 0.00236206 163 0 7.70748e+07 0.024524 1.42528e+06 7.76641e+07 1.34518e+07 24051 3.83413e+07 0 0.146149 0.992412 0.822666 7.70748e+07 0.00334952 1.72162e+07 1.07534e+07 1.71226e+07 183 1.71394e+07 1.44393e+07 0.00285494 1.73314e+07 50.2785 0.0183518 0.994127 0 49.8637 GTEX-1R9PO-2026-SM-E9J4N 2 B1 6 pieces; moderately to severely autolyzed colonic mucosa and preserved target muscularis 5.8 Colon Colon - Sigmoid 0001159 1120 1205 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.974001 315953 0.974177 0.974877 0.811446 22648 1 76 0.0019236 212 0 8.99251e+07 0.0255448 720918 9.22425e+07 5.02859e+06 22668 4.47797e+07 0 0.162731 0.974877 0.79106 8.99251e+07 0.00278091 1.93593e+07 7.97658e+06 1.96015e+07 235 1.9457e+07 1.51233e+07 0.00235187 1.95941e+07 50.1756 0.00781546 0.975753 0 50.3109 GTEX-1R9PO-2126-SM-E9J4O 1 B1 6 pieces; solar elastosis; up to 37 microns thick epidermis; mostly periadnexal fat 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1130 1195 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.984864 258678 0.969825 0.985554 0.767664 24848 1 76 0.0019527 279 0 9.67936e+07 0.0298947 753385 9.82124e+07 5.00367e+06 24891 4.82336e+07 0 0.20216 0.985554 0.756575 9.67936e+07 0.00257105 2.12812e+07 8.5768e+06 2.14898e+07 268 2.13922e+07 1.48112e+07 0.00226166 2.14469e+07 50.0638 0.00767098 0.986245 0 50.2439 GTEX-1R9PO-2426-SM-EVYBS 1 B1 2 pieces; ~30% internal fat with vessels 8 Muscle Muscle - Skeletal 0011907 1133 1192 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.993045 505017 0.981314 0.993722 0.856366 21312 1 76 0.00177367 278 0 9.97299e+07 0.018418 661377 1.0036e+08 4.32977e+06 21334 4.97249e+07 0 0.124949 0.993722 0.85099 9.97299e+07 0.0027097 2.18662e+07 9.54115e+06 2.23025e+07 319 2.22121e+07 1.95555e+07 0.00224137 2.20154e+07 49.7776 0.00659005 0.994399 0 50.494 GTEX-1R9PO-2526-SM-EVYBT 1 B1 2 pieces; lumina open; ~0.7mm attached adventitia 5.5 Blood Vessel Artery - Tibial 0007610 1134 1191 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.985404 811465 0.954813 0.986429 0.737482 23482 1 76 0.00225934 274 0 1.06378e+08 0.044898 545718 1.07842e+08 6.13713e+06 23520 5.29584e+07 0 0.217331 0.986429 0.727474 1.06378e+08 0.00307578 2.26336e+07 2.61991e+07 2.2987e+07 274 2.28922e+07 1.52783e+07 0.00266714 2.28468e+07 49.9504 0.00506036 0.987455 0 50.3873 GTEX-1R9PO-2626-SM-E6CPU 1 B1 6 pieces; 40% glandular/ductal elements (outlined) and skeletal muscle, fibrovascular and adipose tissue 7.7 Salivary Gland Minor Salivary Gland 0006330 1139 1186 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991237 511728 0.974509 0.993224 0.773764 24504 1 76 0.00239832 197 0 8.93426e+07 0.0251977 346923 8.99521e+07 1.54012e+07 24539 4.44425e+07 0 0.200744 0.993224 0.768521 8.93426e+07 0.00344248 2.00246e+07 1.0509e+07 1.98357e+07 204 1.98883e+07 1.51387e+07 0.00291936 2.01401e+07 50.3146 0.00385675 0.99521 0 49.7631 GTEX-1R9PO-2826-SM-E6CPV 1 B1 3 pieces (fragmented); Purkinjie cells present 7.3 Brain Brain - Cerebellum 0002037 1169 1156 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990696 486536 0.953532 0.992665 0.727149 23765 1 76 0.00260279 157 0 7.86028e+07 0.0460847 771073 7.91836e+07 1.39916e+07 23799 3.9077e+07 0 0.226383 0.992665 0.721815 7.86028e+07 0.00377907 1.72395e+07 1.21756e+07 1.71368e+07 180 1.72048e+07 9.89098e+06 0.00318976 1.73111e+07 50.154 0.00973779 0.994635 0 49.8507 GTEX-1R9PO-2926-SM-EVYBR 1 B1 2 pieces 6.2 Brain Brain - Cortex 0001870 1169 1156 BP-80643 RNA Extraction from Paxgene-derived Lysate Plate Based 11/16/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991656 724851 0.954827 0.992527 0.819017 24658 1 76 0.00200266 270 0 8.9813e+07 0.0447828 2.43793e+06 9.04893e+07 4.01375e+06 24680 4.47554e+07 0 0.13581 0.992527 0.812896 8.9813e+07 0.00321406 1.94833e+07 2.00057e+07 1.98185e+07 313 1.97504e+07 1.18365e+07 0.00260783 1.96288e+07 49.8456 0.0269417 0.993397 0 50.4265 GTEX-1RAZA-0002-SM-DE1JD B1 Blood Whole Blood 0013756 -125 BP-69485 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RAZA-0002-SM-DLIQ6 B1 Blood Whole Blood 0013756 -125 BP-69485 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/25/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RAZA-0006-SM-CKZO9 B1 7.9 Blood Whole Blood 0013756 -125 BP-69490 RNA isolation_PAXgene Blood RNA (Manual) 11/25/2015 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.962865 555232 0.979355 0.964659 0.828544 17437 1 76 0.00212943 190 0 1.18947e+08 0.0189322 187818 1.23305e+08 1.19019e+07 17442 5.91439e+07 0 0.150811 0.964659 0.799263 1.18947e+08 0.00350543 2.84129e+07 2.04197e+08 2.84244e+07 242 2.85474e+07 3.51243e+07 0.00281615 2.84948e+07 49.9539 0.0015232 0.966454 0 50.0101 GTEX-1RAZA-0126-SM-E6CI3 1 B1 6 pieces; mostly periadnexal fat (outlined); ~36microns thick epidermis 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 319 1143 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993754 179063 0.972312 0.994815 0.805705 23891 1 76 0.00192181 291 0 9.32079e+07 0.0274566 458322 9.36937e+07 5.55808e+06 23922 4.64491e+07 0 0.166608 0.994815 0.801527 9.32079e+07 0.00243128 2.03116e+07 8.64237e+06 2.05097e+07 291 2.03956e+07 1.6071e+07 0.00217628 2.05078e+07 50.1372 0.00489171 0.995876 0 50.2427 GTEX-1RAZA-0226-SM-E9U4W 1 B1 2 pieces; mature adipose tissue with fibrovascular component and larger vessel (arrow) 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 324 1138 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.989611 281760 0.977494 0.990563 0.829222 22246 1 76 0.00177645 162 0 7.15633e+07 0.0222129 177452 7.22451e+07 2.48696e+06 22264 3.56741e+07 0 0.148272 0.990563 0.821396 7.15633e+07 0.00270167 1.57436e+07 5.6041e+06 1.58449e+07 168 1.58012e+07 1.40129e+07 0.00223861 1.58563e+07 50.0871 0.00245625 0.991514 0 50.1602 GTEX-1RAZA-0326-SM-E6CI4 1 B1 2 pieces; lumina open; adherent adventitia and smaller vessels (outlined) 8 Blood Vessel Artery - Tibial 0007610 327 1135 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994426 412672 0.978611 0.995415 0.86202 20830 1 76 0.00172383 285 0 9.59908e+07 0.0208638 295868 9.64329e+07 5.91837e+06 20845 4.78125e+07 0 0.116592 0.995415 0.858067 9.59908e+07 0.00222007 2.05798e+07 5.88367e+06 2.06974e+07 284 2.0645e+07 2.13321e+07 0.00197171 2.07175e+07 50.0876 0.00306812 0.996404 0 50.1424 GTEX-1RAZA-0426-SM-E8VMW 1 B1 2 pieces; nerve and prineurium 6 Nerve Nerve - Tibial 0001323 326 1136 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.982182 286990 0.971864 0.983141 0.818346 23715 1 76 0.0017837 221 0 8.99998e+07 0.0278245 434180 9.15431e+07 4.5714e+06 23746 4.48244e+07 0 0.153518 0.983141 0.80455 8.99998e+07 0.0023362 1.97489e+07 6.9249e+06 1.99479e+07 251 1.98325e+07 1.53081e+07 0.00205968 1.99496e+07 50.1472 0.0047429 0.984101 0 50.2507 GTEX-1RAZA-0526-SM-E76R2 1 B1 2 pieces; ~20% washed off internal fat (empty spaces)(arrows) 8.3 Muscle Muscle - Skeletal 0011907 334 1128 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993579 628310 0.984122 0.994979 0.873243 21067 1 76 0.0017587 379 0 1.12361e+08 0.0156142 1.12763e+06 1.12928e+08 6.93925e+06 21083 5.59772e+07 0 0.110878 0.994979 0.868859 1.12361e+08 0.00244975 2.43816e+07 1.22169e+07 2.45895e+07 335 2.46876e+07 2.34164e+07 0.00210374 2.44163e+07 49.7238 0.00998539 0.99638 0 50.2123 GTEX-1RAZA-0626-SM-EAZ4H 1 B1 2 pieces; mucous glandular and ductal elements and fragmented fibrovascular tissue with fat and nerves (outlined) 7.3 Salivary Gland Minor Salivary Gland 0006330 324 1138 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990048 516685 0.974159 0.990729 0.806223 24704 1 76 0.00253701 381 0 1.22152e+08 0.0243051 246433 1.23295e+08 9.70316e+06 24743 6.08112e+07 0 0.167936 0.990729 0.798748 1.22152e+08 0.00318657 2.77705e+07 3.11948e+07 2.81247e+07 338 2.81362e+07 2.08669e+07 0.00286156 2.78391e+07 49.7347 0.00199872 0.99141 0 50.3168 GTEX-1RAZA-0826-SM-EAZ4I 2 B1 2 pieces; fibrous septa and micronodularity 6.6 Thyroid Thyroid 0002046 344 1118 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990217 342080 0.96508 0.990926 0.776514 24258 1 76 0.00209745 276 0 9.62318e+07 0.0346492 301931 9.7113e+07 7.85898e+06 24302 4.79638e+07 0 0.188566 0.990926 0.769469 9.62318e+07 0.00296789 2.0991e+07 8.9329e+06 2.1152e+07 264 2.10937e+07 1.48803e+07 0.00253236 2.11154e+07 50.0256 0.00310907 0.991636 0 50.191 GTEX-1RAZA-0926-SM-E6CQ8 1 B1 2 pieces; lobulated mature adipose tissue with fibrovascular component 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 348 1114 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991883 734738 0.975023 0.993738 0.820595 24160 1 76 0.00233302 279 0 9.48482e+07 0.0246737 440665 9.54459e+07 1.66362e+07 24184 4.71914e+07 0 0.154427 0.993738 0.815456 9.48482e+07 0.00328173 2.09940e+07 9.52632e+06 2.08646e+07 259 2.09828e+07 1.73469e+07 0.00280649 2.10374e+07 50.065 0.00461691 0.995592 0 49.8454 GTEX-1RAZA-1026-SM-E6CQ9 1 B1 2 pieces; congestion; capsule included (arrows) 7.4 Spleen Spleen 0002106 355 1107 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.988854 355407 0.96665 0.990953 0.785137 23451 1 76 0.00318947 131 0 7.00334e+07 0.0311431 391392 7.06728e+07 1.27786e+07 23479 3.47478e+07 0 0.181513 0.990953 0.778034 7.00334e+07 0.0044339 1.5655e+07 1.58566e+07 1.55108e+07 149 1.55731e+07 1.17875e+07 0.00381037 1.57318e+07 50.2535 0.00553809 0.993051 0 49.7687 GTEX-1RAZA-1126-SM-E8VMV 1 B1 6 pieces; suggestive of evolving atherosis (rep arrowed); 0.4mm attached adventitia 7.7 Blood Vessel Artery - Aorta 0001496 352 1110 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.988018 595416 0.97498 0.989183 0.828485 22504 1 76 0.00166754 275 0 1.01912e+08 0.0245666 283516 1.03027e+08 4.555e+06 22532 5.07597e+07 0 0.146495 0.989183 0.819523 1.01912e+08 0.00226245 2.2104e+07 6.88837e+06 2.22624e+07 265 2.22148e+07 2.00451e+07 0.00196465 2.22684e+07 50.0602 0.00275187 0.990348 0 50.1785 GTEX-1RAZA-1226-SM-E6CQA 1 B1 6 pieces; target muscularis; attached serosa (outlined) 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 381 1081 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991765 504292 0.974261 0.993626 0.831289 22479 1 76 0.00226493 160 0 7.33252e+07 0.0254149 427828 7.37956e+07 1.29905e+07 22502 3.64697e+07 0 0.142972 0.993626 0.825991 7.33252e+07 0.0032716 1.60177e+07 6.25898e+06 1.58336e+07 172 1.58484e+07 1.35406e+07 0.00276732 1.61309e+07 50.4417 0.00579747 0.995487 0 49.7111 GTEX-1RAZA-1326-SM-DPS12 1 B1 6 pieces; focal superficial desquamation of stratified squamous epithelium; ~0.4mm thick epithelium; submucosal glands (outlined) 9.9 Esophagus Esophagus - Mucosa 0006920 374 1088 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992935 339979 0.980174 0.993813 0.859477 20470 1 76 0.00203595 146 0 6.58416e+07 0.0194558 281957 6.62515e+07 3.75013e+06 20479 3.28073e+07 0 0.120697 0.993813 0.85416 6.58416e+07 0.00269448 1.49722e+07 1.03372e+07 1.50684e+07 148 1.50821e+07 1.50009e+07 0.00236492 1.50137e+07 49.8864 0.00425586 0.994691 0 50.1601 GTEX-1RAZA-1426-SM-EV79H 1 B1 6 pieces; target muscularis; 3 pieces contain esophageal mucosa (arrows) 8.4 Esophagus Esophagus - Muscularis 0004648 378 1084 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991169 277072 0.974526 0.992255 0.823891 23317 1 76 0.00239912 285 0 1.01718e+08 0.0251795 720207 1.02512e+08 1.16008e+07 23343 5.06899e+07 0 0.150635 0.992255 0.81751 1.01718e+08 0.00368503 2.18182e+07 8.65786e+06 2.20753e+07 298 2.1988e+07 1.82451e+07 0.00304138 2.20043e+07 50.0186 0.00702561 0.99334 0 50.2929 GTEX-1RAZA-1626-SM-EV79I 1 B1 2 pieces; well preserved parenchyma; Langerhans islets present (rep outlined) 7.3 Pancreas Pancreas 0001150 385 1077 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991609 270701 0.981887 0.992621 0.851747 22463 1 76 0.00258837 157 0 1.10201e+08 0.0177031 288508 1.1102e+08 1.1792e+07 22483 5.49231e+07 0 0.13014 0.992621 0.845461 1.10201e+08 0.00376844 2.53413e+07 2.89294e+07 2.56725e+07 183 2.55425e+07 3.42261e+07 0.0031778 2.55763e+07 50.0331 0.00259871 0.993632 0 50.3246 GTEX-1RAZA-1726-SM-DPS13 1 B1 6 pieces; target mucosa and muscularis present 7.2 Colon Colon - Transverse 0001157 400 1062 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.994166 205633 0.973334 0.995043 0.811693 22304 1 76 0.00220491 139 0 6.09392e+07 0.0262324 1.12297e+06 6.12428e+07 3.41877e+06 22326 3.03665e+07 0 0.161641 0.995043 0.80767 6.09392e+07 0.00274267 1.35406e+07 7.2306e+06 1.3716e+07 153 1.3661e+07 8.66842e+06 0.00247355 1.36377e+07 49.9575 0.0183364 0.99592 0 50.3218 GTEX-1RAZA-1826-SM-DTXA2 2 B1 6 pieces; moderate to severe autolysis of mucosa and preserved muscularis; abundant residual mucosal lymphoid aggregates (outlined) 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 401 1061 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.988568 1.12297e+06 0.969585 0.990605 0.797831 24586 1 76 0.00267887 165 0 8.01247e+07 0.0284662 252276 8.08846e+07 3.79187e+06 24612 3.97242e+07 0 0.171754 0.990605 0.790336 8.01247e+07 0.00313996 1.77082e+07 9.31391e+06 1.76491e+07 175 1.80398e+07 1.5021e+07 0.00290894 1.74687e+07 49.1958 0.00311896 0.992643 0 49.9165 GTEX-1RAZA-2126-SM-EVR4A 1 B1 2 pieces; spermatogenesis present 6 Testis Testis 0000473 395 1067 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990425 438357 0.933489 0.992213 0.75311 35053 1 76 0.00228362 290 0 1.40412e+08 0.0661612 1.03511e+06 1.41514e+08 1.08437e+07 35143 6.9927e+07 0 0.180379 0.992213 0.747246 1.40412e+08 0.00320881 2.91688e+07 1.76671e+07 2.93458e+07 312 2.93727e+07 2.44367e+07 0.00274538 2.93557e+07 49.9855 0.00731458 0.994001 0 50.1512 GTEX-1RAZA-2226-SM-E9U4X 1 B1 6 pieces; hair bearing skin; mostly periadnexal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 393 1069 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.985766 164580 0.971081 0.986674 0.814136 23390 1 76 0.00183015 143 0 6.28014e+07 0.028677 460546 6.36496e+07 2.67484e+06 23413 3.13002e+07 0 0.156944 0.986674 0.803287 6.28014e+07 0.00277291 1.38798e+07 6.0611e+06 1.39706e+07 150 1.3928e+07 1.16232e+07 0.00230109 1.39792e+07 50.0916 0.00723564 0.987582 0 50.1631 GTEX-1RAZQ-0001-SM-DE1JA B1 Blood Whole Blood 0013756 -175 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RAZQ-0001-SM-DLIQ1 B1 Blood Whole Blood 0013756 -175 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RAZQ-0005-SM-DO93U B1 5.7 Blood Whole Blood 0013756 -175 BP-69568 RNA isolation_PAXgene Blood RNA (Manual) 11/30/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.987269 463361 0.978197 0.988159 0.845905 17164 1 76 0.00204331 126 0 7.19894e+07 0.0213639 607071 7.2852e+07 4.34763e+06 17171 3.58376e+07 0 0.132292 0.988159 0.835888 7.19894e+07 0.00290939 1.65803e+07 7.24354e+07 1.66529e+07 138 1.66773e+07 1.80798e+07 0.00247596 1.66266e+07 49.924 0.00833293 0.989049 0 50.1093 GTEX-1RAZQ-0126-SM-EV7B1 1 B1 2 pieces; no abnormalities 7.9 Spleen Spleen 0002106 440 740 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.987675 390881 0.96517 0.989153 0.785909 24273 1 76 0.00279479 209 0 9.22579e+07 0.033522 665754 9.32696e+07 9.6914e+06 24312 4.58991e+07 0 0.179261 0.989153 0.777384 9.22579e+07 0.0045325 2.03665e+07 2.36008e+07 2.05556e+07 226 2.05642e+07 1.63534e+07 0.00366235 2.04912e+07 49.911 0.00713795 0.99063 0 50.231 GTEX-1RAZQ-0226-SM-EV7BK 1 B1 2 pieces, cortex, ~15% adherent fat, delineated 7.5 Adrenal Gland Adrenal Gland 0002369 444 736 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991404 427920 0.975255 0.99279 0.825199 23888 1 76 0.00229811 373 0 1.13836e+08 0.024419 2.97823e+06 1.14663e+08 1.28319e+07 23913 5.6706e+07 0 0.150055 0.99279 0.81925 1.13836e+08 0.00368598 2.50659e+07 1.74931e+07 2.5338e+07 334 2.52636e+07 1.60619e+07 0.00299108 2.52759e+07 50.0123 0.0259739 0.994176 0 50.2698 GTEX-1RAZQ-0326-SM-E9J45 0 B1 2 pieces, 2 mm nubbin adherent fat, delineated, otherwise clean 6.4 Nerve Nerve - Tibial 0001323 464 716 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.981447 372504 0.965773 0.982331 0.722333 24072 1 76 0.00199221 192 0 8.43593e+07 0.0339504 463070 8.58767e+07 4.23626e+06 24116 4.20113e+07 0 0.24344 0.982331 0.70957 8.43593e+07 0.00283071 1.85556e+07 7.66867e+06 1.87439e+07 202 1.86488e+07 1.16126e+07 0.00241108 1.87259e+07 50.1031 0.00539227 0.983214 0 50.2523 GTEX-1RAZQ-0426-SM-DTXFQ 0 B1 2 pieces, interstitial/adherent fat/vascular elements, rep delineated 8.6 Muscle Muscle - Skeletal 0011907 466 714 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994858 760351 0.984293 0.995841 0.875425 20101 1 76 0.00164656 378 0 1.13316e+08 0.0154146 1.16802e+06 1.1379e+08 5.71666e+06 20112 5.64739e+07 0 0.108868 0.995841 0.871784 1.13316e+08 0.00203565 2.45538e+07 1.32422e+07 2.50087e+07 337 2.5093e+07 2.2649e+07 0.00184091 2.45578e+07 49.4611 0.0102648 0.996823 0 50.4589 GTEX-1RAZQ-0526-SM-E8VOQ 0 B1 2 pieces, trace atherosis delineated; adherent 2 mm nubbin fibrous tissue, otherwise clean 6.9 Blood Vessel Artery - Tibial 0007610 474 706 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.984534 716755 0.975847 0.985906 0.84644 21259 1 76 0.0016535 207 0 8.85942e+07 0.0237505 314436 8.98608e+07 4.63811e+06 21272 4.41036e+07 0 0.129407 0.985906 0.83451 8.85942e+07 0.00233838 1.90421e+07 7.86671e+06 1.92345e+07 227 1.9149e+07 1.75285e+07 0.00199546 1.92504e+07 50.132 0.00349915 0.987277 0 50.2513 GTEX-1RAZQ-0626-SM-E8VOR 0 B1 2 pieces, ~15% fascia, rep delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 478 702 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.986272 895079 0.976595 0.988008 0.800702 23439 1 76 0.00171827 275 0 1.02327e+08 0.0231389 547021 1.0357e+08 4.93782e+06 23476 5.09439e+07 0 0.175893 0.988008 0.7911 1.02327e+08 0.00236507 2.25405e+07 9.21329e+06 2.2789e+07 323 2.27614e+07 1.68773e+07 0.00204111 2.27306e+07 49.9662 0.00528168 0.989743 0 50.274 GTEX-1RAZQ-0726-SM-EAZ43 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~50-60 microns. 6 Skin Skin - Sun Exposed (Lower leg) 0004264 480 700 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.98689 272101 0.972697 0.987624 0.782406 23877 1 76 0.00205885 203 0 8.11033e+07 0.0270307 653394 8.21196e+07 6.66406e+06 23912 4.04112e+07 0 0.190291 0.987624 0.772723 8.11033e+07 0.00291827 1.78358e+07 7.51008e+06 1.80235e+07 209 1.79545e+07 1.20443e+07 0.00248824 1.79578e+07 50.0046 0.00795662 0.988358 0 50.2617 GTEX-1RAZQ-0826-SM-EVR4L 1 B1 2 pieces, mild glandular hyperplasia 6.2 Prostate Prostate 0002367 668 512 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986678 140658 0.964365 0.988559 0.762981 24282 1 76 0.00218968 161 0 7.63846e+07 0.0353795 654669 7.72686e+07 5.77075e+06 24322 3.80304e+07 0 0.201384 0.988559 0.754252 7.63846e+07 0.00321082 1.67764e+07 7.35364e+06 1.69804e+07 199 1.69446e+07 1.03193e+07 0.00269928 1.69452e+07 50.0008 0.00847264 0.990441 0 50.3021 GTEX-1RAZQ-0926-SM-EAZ4Q 1 B1 2 pieces, no abnromalities 5.7 Thyroid Thyroid 0002046 674 506 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989771 318809 0.961939 0.99053 0.706659 24528 1 76 0.0021186 164 0 8.82848e+07 0.0377982 219423 8.91288e+07 7.43476e+06 24589 4.39894e+07 0 0.255279 0.99053 0.699967 8.82848e+07 0.00299593 1.92111e+07 7.76804e+06 1.93099e+07 195 1.92909e+07 1.24271e+07 0.00255693 1.92934e+07 50.0032 0.00246186 0.991289 0 50.1282 GTEX-1RAZQ-1026-SM-EAZ4R 1 B1 2 pieces, patchy acute pneumonia; foci ensquared. Evidence of chronic congestion 7.5 Lung Lung 0008952 675 505 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991755 377817 0.976297 0.992459 0.781411 23696 1 76 0.00216968 167 0 8.11187e+07 0.0233399 367645 8.17351e+07 6.36229e+06 23735 4.04158e+07 0 0.194887 0.992459 0.775518 8.11187e+07 0.00293349 1.80727e+07 7.30976e+06 1.81563e+07 182 1.81446e+07 1.50607e+07 0.00255132 1.81406e+07 49.9945 0.00449801 0.993164 0 50.1153 GTEX-1RAZQ-1126-SM-EAZ4S 1 B1 2 pieces, spermatogenesis present, appears reduced 6.3 Testis Testis 0000473 678 502 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991892 503715 0.929545 0.992622 0.723722 33606 1 76 0.00199056 218 0 9.16061e+07 0.0701127 832390 9.2287e+07 7.14596e+06 33675 4.56611e+07 0 0.205823 0.992622 0.718382 9.16061e+07 0.00275966 1.90868e+07 1.29871e+07 1.91452e+07 210 1.91543e+07 1.52019e+07 0.00237483 1.91391e+07 49.9801 0.00901958 0.993352 0 50.0763 GTEX-1RAZQ-1226-SM-EWRNL 1 B1 2 pieces, gynecomastoid stromal and ductal (rep ensquared) hyperplasia 6.1 Breast Breast - Mammary Tissue 0008367 692 488 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987108 335719 0.965914 0.98982 0.74659 25432 1 76 0.0023779 277 0 1.01018e+08 0.0338219 441613 1.02057e+08 6.5477e+06 25492 5.02599e+07 0 0.219324 0.98982 0.73899 1.01018e+08 0.00307482 2.20664e+07 9.31159e+06 2.23289e+07 277 2.23591e+07 1.51625e+07 0.00271726 2.22751e+07 49.9059 0.00432712 0.992532 0 50.2956 GTEX-1RAZQ-1326-SM-E9TK6 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~50-60 microns. 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 698 482 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.984856 341945 0.972505 0.986348 0.78782 22502 1 76 0.00196312 217 0 8.11163e+07 0.0273276 600707 8.22391e+07 3.47725e+06 22532 4.0379e+07 0 0.184685 0.986348 0.777064 8.11163e+07 0.00246335 1.78665e+07 9.98684e+06 1.80248e+07 205 1.79784e+07 1.33104e+07 0.00221285 1.80298e+07 50.0714 0.0073044 0.987839 0 50.2206 GTEX-1RAZQ-1426-SM-EV7B2 1 B1 2 pieces, islets rare, degenerating (encircled), cystic metaplasia (ensquared) 7 Pancreas Pancreas 0001150 701 479 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990678 380373 0.977206 0.992016 0.848658 22799 1 76 0.00241914 164 0 1.03565e+08 0.0225149 183585 1.04399e+08 1.07834e+07 22823 5.15873e+07 0 0.128548 0.992016 0.841882 1.03565e+08 0.00410426 2.36057e+07 2.1441e+07 2.38798e+07 178 2.38612e+07 2.89152e+07 0.00326056 2.37649e+07 49.8989 0.0017585 0.993354 0 50.2886 GTEX-1RAZQ-1526-SM-E6CJI 1 B1 2 pieces, trace interstitial vascular elements/fascia 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 704 476 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993206 257091 0.977741 0.994517 0.82301 23188 1 76 0.00180634 280 0 1.05363e+08 0.021932 532474 1.05944e+08 6.87890e+06 23222 5.2495e+07 0 0.154731 0.994517 0.818497 1.05363e+08 0.00234331 2.30811e+07 1.11092e+07 2.3219e+07 317 2.31621e+07 1.79925e+07 0.00207447 2.32598e+07 50.1053 0.00502601 0.995827 0 50.149 GTEX-1RAZQ-1626-SM-E9U6C 1 B1 6 pieces, confirmed target muscularis 7.1 Esophagus Esophagus - Muscularis 0004648 708 472 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991907 176615 0.974941 0.992611 0.821349 22445 1 76 0.00166263 208 0 8.4125e+07 0.0247891 571994 8.47512e+07 3.15218e+06 22468 4.19387e+07 0 0.153591 0.992611 0.815281 8.4125e+07 0.00254206 1.81838e+07 6.8099e+06 1.83078e+07 247 1.82296e+07 1.42738e+07 0.00210203 1.8319e+07 50.1223 0.0067491 0.993315 0 50.1698 GTEX-1RAZQ-1726-SM-EAZ4T 1 B1 5 pieces, Squamous mucosa is ~0.4mm, ~25-30% thickness approaching score 2, surface sloughing. 8.6 Esophagus Esophagus - Mucosa 0006920 709 471 BP-80588 RNA Extraction from Paxgene-derived Lysate Plate Based 11/15/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.991792 535505 0.969175 0.99256 0.783515 23088 1 76 0.00198413 176 0 8.62167e+07 0.0305429 166114 8.6863e+07 6.73302e+06 23121 4.29613e+07 0 0.18566 0.99256 0.777685 8.62167e+07 0.00286199 1.93013e+07 1.29687e+07 1.93621e+07 188 1.93751e+07 1.7142e+07 0.00242272 1.93579e+07 49.9778 0.00191237 0.993327 0 50.0785 GTEX-1RAZQ-1826-SM-E76P9 1 B1 6 pieces, confirmed target muscularis 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 714 466 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993291 617958 0.975085 0.994635 0.81215 23496 1 76 0.00182612 279 0 1.10274e+08 0.0246158 616075 1.10869e+08 6.81926e+06 23533 5.49251e+07 0 0.162935 0.994635 0.807793 1.10274e+08 0.00261658 2.38337e+07 9.11949e+06 2.39903e+07 327 2.40743e+07 1.9902e+07 0.00222082 2.38849e+07 49.8026 0.0055568 0.995979 0 50.1638 GTEX-1RAZQ-2026-SM-E76P7 1 B1 6 pieces, confirmed target muscularis 5.8 Colon Colon - Sigmoid 0001159 722 458 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.993182 289918 0.975039 0.994471 0.795366 22064 1 76 0.0018406 206 0 8.33017e+07 0.0247584 531877 8.37648e+07 5.47532e+06 22098 4.14912e+07 0 0.179673 0.994471 0.790969 8.33017e+07 0.00264966 1.81642e+07 7.10373e+06 1.82999e+07 223 1.83068e+07 1.24824e+07 0.00224461 1.82621e+07 49.939 0.00634965 0.99576 0 50.1861 GTEX-1RAZQ-2126-SM-DTX9V 2 B1 6 pieces, target mucosa with moderately advanced autolysis, up to ~0.4mm, ~10-20% thickness 7.4 Colon Colon - Transverse 0001157 731 449 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.992269 505098 0.975122 0.993916 0.805469 22413 1 76 0.00177605 171 0 7.68438e+07 0.0245893 385922 7.73142e+07 3.11453e+06 22438 3.82424e+07 0 0.169653 0.993916 0.800569 7.68438e+07 0.00213238 1.68282e+07 6.08161e+06 1.68446e+07 193 1.69666e+07 1.32471e+07 0.00195392 1.68195e+07 49.7824 0.0049916 0.995563 0 50.0243 GTEX-1RAZQ-2226-SM-DPRZR 1 B1 6 pieces, target lymphoid aggregates ~40% of tissue, rep delineated 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 726 454 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.992813 249151 0.959846 0.993759 0.71925 23962 1 76 0.00211113 125 0 6.07963e+07 0.0397484 168064 6.11781e+07 3.30722e+06 23998 3.02834e+07 0 0.240596 0.993759 0.714761 6.07963e+07 0.00295222 1.327e+07 7.56233e+06 1.33961e+07 129 1.3379e+07 9.77278e+06 0.00253127 1.33415e+07 49.9298 0.00274713 0.994704 0 50.2364 GTEX-1RAZR-0003-SM-DCXS4 B1 Blood Whole Blood 0013756 -84 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RAZR-0003-SM-DLIQL B1 Blood Whole Blood 0013756 -84 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RAZR-0006-SM-DLHBR B1 8.8 Blood Whole Blood 0013756 -84 BP-69568 RNA isolation_PAXgene Blood RNA (Manual) 11/30/2015 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.986925 980948 0.963287 0.989815 0.810235 20516 1 76 0.00300624 205 0 1.07021e+08 0.0359428 253343 1.08122e+08 9.489e+06 20533 5.31633e+07 0 0.153052 0.989815 0.801982 1.07021e+08 0.00337634 2.38242e+07 8.03641e+07 2.40556e+07 216 2.42235e+07 2.44292e+07 0.00319075 2.39636e+07 49.7304 0.00234312 0.992706 0 50.2416 GTEX-1RAZR-0226-SM-EVYC6 0 B1 2 pieces; 1 with 5% other with 20% fibrous content 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 471 788 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.9917 325884 0.975127 0.992214 0.812315 23209 1 76 0.00196884 175 0 8.14886e+07 0.0245514 298610 8.21281e+07 3.47865e+06 23236 4.06273e+07 0 0.162812 0.992214 0.80599 8.14886e+07 0.00296104 1.78438e+07 7.07082e+06 1.80825e+07 197 1.80388e+07 1.53609e+07 0.00246468 1.79314e+07 49.8508 0.00363591 0.992727 0 50.3323 GTEX-1RAZR-0326-SM-EWRNM 0 B1 2 pieces; 1 with 5% internal fat 8.1 Muscle Muscle - Skeletal 0011907 474 785 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.990595 410665 0.98433 0.993376 0.870027 21376 1 76 0.0021286 378 0 1.36021e+08 0.0154321 1.35906e+06 1.36928e+08 9.51088e+06 21393 6.77225e+07 0 0.114304 0.993376 0.864263 1.36021e+08 0.00262544 2.98582e+07 2.05241e+07 3.00382e+07 327 3.01101e+07 2.50241e+07 0.00237051 3.00781e+07 49.9734 0.00992541 0.996156 0 50.1503 GTEX-1RAZR-0426-SM-EVYC7 0 B1 2 pieces: well trimmed 7.1 Nerve Nerve - Tibial 0001323 477 782 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989353 299027 0.968184 0.989855 0.760908 22956 1 76 0.00201197 143 0 6.05549e+07 0.0315212 212267 6.11755e+07 2.76006e+06 22984 3.01669e+07 0 0.207276 0.989855 0.753189 6.05549e+07 0.00315428 1.33352e+07 4.81918e+06 1.34447e+07 143 1.3387e+07 9.79626e+06 0.00258283 1.34237e+07 50.0683 0.0034698 0.990358 0 50.2045 GTEX-1RAZR-0626-SM-E6CJO 0 B1 6 pieces; no plaques, no lesions; well trimmed 8.1 Blood Vessel Artery - Aorta 0001496 505 754 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99438 309917 0.980333 0.995327 0.86903 21192 1 76 0.00177214 178 0 7.97005e+07 0.0190133 127113 8.00747e+07 5.00767e+06 21209 3.96957e+07 0 0.111303 0.995327 0.86497 7.97005e+07 0.00219585 1.72683e+07 4.81789e+06 1.73464e+07 200 1.73188e+07 1.81435e+07 0.00198379 1.73625e+07 50.0631 0.00158743 0.996275 0 50.1129 GTEX-1RAZR-0726-SM-EV7BA 1 B1 2 pieces; area of subpleural fibrosis at edge of 1 piece (10% of area) [arrowed]; numerous alveolar macrophages 6.9 Lung Lung 0008952 523 736 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.9894 289121 0.974589 0.990547 0.791409 25197 1 76 0.00268331 209 0 8.87771e+07 0.0250341 218937 8.96244e+07 1.02334e+07 25230 4.42132e+07 0 0.18318 0.990547 0.783927 8.87771e+07 0.00393781 1.96563e+07 8.451e+06 1.98264e+07 210 1.97855e+07 1.61052e+07 0.00330983 1.97975e+07 50.0152 0.00244283 0.991694 0 50.2154 GTEX-1RAZR-0826-SM-EYYWP 1 B1 2 pieces; 2 glands, 1 with 30% lip at edge [marked] 7 Salivary Gland Minor Salivary Gland 0006330 521 738 BP-79105 RNA Extraction from Paxgene-derived Lysate Plate Based 10/04/2016 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.972548 135994 0.965816 0.974936 0.869265 20563 1 76 0.00281332 130 0 6.3289e+07 0.0308448 298011 6.49161e+07 2.57642e+06 20573 3.1378e+07 0 0.0965511 0.974936 0.847477 6.3289e+07 0.0037889 1.42506e+07 2.04449e+07 1.45091e+07 151 1.4478e+07 1.24007e+07 0.00329991 1.44322e+07 49.9209 0.00459071 0.977323 0 50.4494 GTEX-1RAZR-1026-SM-E8VOJ 0 B1 2 pieces; fatty tissue with <5% stroma 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 530 729 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.988368 851932 0.976395 0.990717 0.820777 26003 1 76 0.00220599 294 0 1.5584e+08 0.0231247 694410 1.573e+08 1.29077e+07 26058 7.75138e+07 0 0.155618 0.990717 0.813157 1.5584e+08 0.00356707 3.41462e+07 1.56068e+07 3.47558e+07 321 3.50921e+07 2.99947e+07 0.00288491 3.41228e+07 49.2998 0.00441454 0.993065 0 50.4423 GTEX-1RAZR-1126-SM-E6CRC 1 B1 2 pieces; well dissected thyroid with <5% stroma 7.3 Thyroid Thyroid 0002046 533 726 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.992592 337382 0.969456 0.994249 0.779262 23428 1 76 0.00225623 140 0 7.05232e+07 0.0302083 176801 7.09311e+07 1.19516e+07 23457 3.51041e+07 0 0.190193 0.994249 0.774781 7.05232e+07 0.00313718 1.56226e+07 6.33296e+06 1.53789e+07 153 1.5422e+07 1.26062e+07 0.00269597 1.56905e+07 50.4314 0.00249257 0.995906 0 49.6069 GTEX-1RAZR-1226-SM-E6CRD 0 B1 6 pieces; moderately hyperplastic squamous epithelium with chronic inflammation in lamina propria and squamous metaplasia of glandular ducts [circled]; a few submucosal glands [arrowed] 9.1 Esophagus Esophagus - Mucosa 0006920 544 715 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991237 440068 0.974942 0.993149 0.824389 21931 1 76 0.00227602 141 0 6.7077e+07 0.0246081 115388 6.75397e+07 1.18107e+07 21947 3.3364e+07 0 0.150554 0.993149 0.818741 6.7077e+07 0.00343023 1.52943e+07 8.83082e+06 1.48992e+07 146 1.49628e+07 1.44136e+07 0.00285202 1.53536e+07 50.6446 0.00170845 0.995061 0 49.3457 GTEX-1RAZR-1426-SM-EVR4M 0 B1 5 pieces; 2 have 10 & 20% stromal contents 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 558 701 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989658 260114 0.973546 0.991383 0.830128 23557 1 76 0.0021059 277 0 1.12355e+08 0.0261652 614620 1.13332e+08 8.61643e+06 23584 5.59566e+07 0 0.143418 0.991383 0.822974 1.12355e+08 0.00322549 2.40032e+07 8.98916e+06 2.43169e+07 310 2.42537e+07 2.03341e+07 0.00266472 2.42421e+07 49.988 0.0054232 0.993107 0 50.3247 GTEX-1RAZR-1526-SM-EAZ4U 2 B1 6 pieces; mucosa ranges from slight to moderate autolysis; muscularis has slight autolysis 6.7 Stomach Stomach 0000945 561 698 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.986695 358431 0.979409 0.987689 0.851814 23431 1 76 0.00197855 332 0 1.02155e+08 0.0203471 404841 1.03428e+08 8.85622e+06 23456 5.08878e+07 0 0.127595 0.987689 0.841328 1.02155e+08 0.00271691 2.35249e+07 8.595e+07 2.37217e+07 268 2.37107e+07 2.73533e+07 0.00234736 2.36428e+07 49.9283 0.00391422 0.988684 0 50.2083 GTEX-1RAZR-1626-SM-EAZ4V 1 B1 2 pieces; moderately congested 6.4 Spleen Spleen 0002106 563 696 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987946 898148 0.934176 0.988476 0.674102 25551 1 76 0.00250955 166 0 9.56785e+07 0.0652877 320912 9.67939e+07 7.09395e+06 25600 4.76498e+07 0 0.260074 0.988476 0.666334 9.56785e+07 0.0033027 2.03172e+07 3.32875e+07 2.05013e+07 199 2.04789e+07 1.29796e+07 0.00290591 2.04155e+07 49.9225 0.00331541 0.989005 0 50.2255 GTEX-1RAZR-1826-SM-E6CRE 1 B1 5 pieces; abundant lymphoid nodules in 4 pieces [circled]; well dissected 7 Small Intestine Small Intestine - Terminal Ileum 0001211 576 683 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.99113 320603 0.964666 0.993073 0.751235 25293 1 76 0.0025275 162 0 8.00432e+07 0.0348613 322736 8.06014e+07 1.45948e+07 25336 3.98168e+07 0 0.213431 0.993073 0.746032 8.00432e+07 0.00355423 1.76609e+07 8.65252e+06 1.74283e+07 174 1.74647e+07 1.29633e+07 0.00303986 1.77718e+07 50.4359 0.0040041 0.995017 0 49.6686 GTEX-1RAZR-1926-SM-E6CRF 1 B1 5 pieces; well dissected full thickness 7 Colon Colon - Transverse 0001157 583 676 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990941 395182 0.972723 0.993013 0.80555 22976 1 76 0.00245177 155 0 7.11149e+07 0.0266169 844383 7.16153e+07 1.2248e+07 22998 3.53605e+07 0 0.167173 0.993013 0.799921 7.11149e+07 0.00351241 1.58979e+07 8.05257e+06 1.59187e+07 171 1.59486e+07 1.1195e+07 0.00298098 1.59986e+07 50.0782 0.0117905 0.995086 0 50.0327 GTEX-1RAZR-2026-SM-E9TKE 0 B1 6 pieces; muscularis; abundant adjacent fat on 2 6.9 Colon Colon - Sigmoid 0001159 592 667 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988513 539061 0.976639 0.990267 0.832293 22722 1 76 0.00195519 219 0 8.89519e+07 0.0230341 349686 8.98262e+07 3.87353e+06 22747 4.42629e+07 0 0.144346 0.990267 0.824192 8.89519e+07 0.00252537 1.92096e+07 6.38322e+06 1.93958e+07 224 1.94295e+07 1.7424e+07 0.00223978 1.93176e+07 49.8556 0.00389292 0.992021 0 50.2412 GTEX-1RAZR-2126-SM-E9U6T 0 B1 6 pieces; well trimmed; a few hair follicles; 5% dermal fat 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 604 655 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991608 278804 0.975063 0.992505 0.820532 23704 1 76 0.00174738 222 0 8.27638e+07 0.0246657 418468 8.33888e+07 3.30421e+06 23727 4.1256e+07 0 0.154532 0.992505 0.814382 8.27638e+07 0.00271612 1.81848e+07 8.06324e+06 1.83002e+07 208 1.82716e+07 1.56529e+07 0.00223131 1.82871e+07 50.0211 0.00501828 0.993402 0 50.1582 GTEX-1RAZR-2226-SM-E6CRG 1 B1 2 pieces; active spermatogenesis 6.7 Testis Testis 0000473 605 654 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.989842 596469 0.934682 0.992144 0.739892 32552 1 76 0.00230606 165 0 8.02713e+07 0.065042 1.10392e+06 8.09069e+07 1.33869e+07 32614 3.99187e+07 0 0.194789 0.992144 0.73408 8.02713e+07 0.00343313 1.69554e+07 9.9404e+06 1.67404e+07 173 1.68089e+07 1.21823e+07 0.00286829 1.70464e+07 50.3506 0.0136443 0.994447 0 49.6811 GTEX-1RAZS-0004-SM-DCXS3 B1 Blood Whole Blood 0013756 1010 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RAZS-0005-SM-DO93D B1 7.7 Blood Whole Blood 0013756 1010 BP-69568 RNA isolation_PAXgene Blood RNA (Manual) 11/30/2015 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.975761 593312 0.977615 0.976882 0.775748 18821 1 76 0.00208423 114 0 9.69071e+07 0.0214317 90934 9.92003e+07 5.73984e+06 18831 4.81732e+07 0 0.201867 0.976882 0.757814 9.69071e+07 0.00305619 2.26804e+07 1.65425e+08 2.28359e+07 139 2.28546e+07 2.53649e+07 0.00256965 2.27825e+07 49.9211 0.00091667 0.978003 0 50.1708 GTEX-1RAZS-0426-SM-E9J4C 1 B1 2 pieces; nerve with prineurium and insignificant internal fat (outlined) 6.9 Nerve Nerve - Tibial 0001323 1207 1312 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.984722 289914 0.965474 0.985333 0.75459 24133 1 76 0.00208769 207 0 8.48778e+07 0.034235 269493 8.61412e+07 3.65502e+06 24173 4.22966e+07 0 0.210884 0.985333 0.743522 8.48778e+07 0.00278621 1.866e+07 7.45575e+06 1.87881e+07 206 1.87074e+07 1.30158e+07 0.00243673 1.87938e+07 50.1153 0.0031285 0.985944 0 50.1711 GTEX-1RAZS-0526-SM-E9J4D 1 B1 2 pieces; fibrosclerotic plaque (arrows); medial discrete calcifications (outlined); lumina open with ~25% narrowing; attached rim of adventitia 5.9 Blood Vessel Artery - Tibial 0007610 1212 1307 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.983271 399537 0.968628 0.9841 0.754157 23858 1 76 0.00229568 196 0 8.91578e+07 0.0309945 294714 9.05983e+07 4.51213e+06 23903 4.44019e+07 0 0.21447 0.9841 0.742166 8.91578e+07 0.00297073 1.93297e+07 9.12434e+06 1.94566e+07 206 1.93856e+07 1.4352e+07 0.00263292 1.9475e+07 50.115 0.00325297 0.984928 0 50.1636 GTEX-1RAZS-0826-SM-E76QP 1 B1 2 pieces; perivascular fat (outlined); mild interstitial fibrosis; one piece with ~1mm rim of fat (arrow) 5.8 Heart Heart - Left Ventricle 0006566 1240 1279 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.990513 137521 0.987512 0.992438 0.885383 18796 1 76 0.00238278 365 0 8.72414e+07 0.0124355 8.066e+06 8.79061e+07 5.78748e+06 18801 4.34554e+07 0 0.102129 0.992438 0.878687 8.72414e+07 0.00351718 1.93721e+07 2.26141e+07 1.97204e+07 378 1.9582e+07 3.4014e+06 0.00294888 1.96194e+07 50.0477 0.091757 0.994363 0 50.4455 GTEX-1RAZS-1026-SM-E9TID 1 B1 2 pieces; interstitial fibrosis with discrete nodularity 5.7 Thyroid Thyroid 0002046 1248 1271 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.979594 445113 0.958508 0.981337 0.719042 24651 1 76 0.0023349 127 0 6.478e+07 0.0412173 238843 6.60119e+07 2.92206e+06 24689 3.22151e+07 0 0.239465 0.981337 0.705623 6.478e+07 0.00298738 1.39838e+07 1.05475e+07 1.41127e+07 141 1.41088e+07 9.45521e+06 0.00266056 1.40991e+07 49.9828 0.00361818 0.983081 0 50.2295 GTEX-1RAZS-1226-SM-E8VMT 1 B1 2 pieces; gynecomastoid stromal and ductal hyperplasia;~50% mature adipose tissue 6.7 Breast Breast - Mammary Tissue 0008367 1258 1261 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.979798 826391 0.971298 0.981376 0.747984 25251 1 76 0.00207235 210 0 9.41877e+07 0.0283859 836544 9.59751e+07 4.62163e+06 25300 4.68722e+07 0 0.223314 0.981376 0.734053 9.41877e+07 0.00271375 2.07443e+07 9.30296e+06 2.09857e+07 224 2.0952e+07 1.42293e+07 0.00239254 2.0914e+07 49.9547 0.00871626 0.982954 0 50.2892 GTEX-1RAZS-2226-SM-E8VMU 2 B1 2 pieces; pulmonary tissue with pleura; massive congestion; patchy subpleural lymphocytic infiltrates; focal inflammatory cell infiltrate with fresh hemorrhage (outlined); thick-walled vessels 5.5 Lung Lung 0008952 1278 1241 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.963459 406593 0.97146 0.964566 0.805687 24270 1 76 0.00205841 373 0 1.05124e+08 0.0282247 522743 1.08985e+08 6.12279e+06 24300 5.2322e+07 0 0.165773 0.964566 0.777138 1.05124e+08 0.002754 2.3115e+07 1.16932e+07 2.33989e+07 344 2.32677e+07 1.60006e+07 0.0024058 2.33673e+07 50.1068 0.00479645 0.965673 0 50.3051 GTEX-1RAZS-2526-SM-E6CHT 1 B1 6 pieces; well trimmed skin with rare hair follicles 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1287 1232 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992869 251289 0.975169 0.994126 0.811527 24608 1 76 0.0020354 302 0 1.14986e+08 0.024585 448102 1.15666e+08 7.33183e+06 24651 5.72842e+07 0 0.163643 0.994126 0.80676 1.14986e+08 0.00266504 2.48979e+07 1.11041e+07 2.51329e+07 324 2.50057e+07 2.16429e+07 0.00234982 2.51494e+07 50.1433 0.00387411 0.995384 0 50.2349 GTEX-1RAZS-2626-SM-EV79C 1 B1 6 pieces; ~ 280 microns stratified squamous epithelium; submucosal glands (outlined) 5.8 Esophagus Esophagus - Mucosa 0006920 1289 1230 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983332 259283 0.975575 0.984404 0.808004 22608 1 76 0.00265537 268 0 8.83868e+07 0.0240686 1.27862e+06 8.97871e+07 9.76277e+06 22630 4.4012e+07 0 0.167571 0.984404 0.795403 8.83868e+07 0.00414968 1.9823e+07 1.02018e+07 2.00505e+07 259 1.99625e+07 1.19126e+07 0.00340171 2.00032e+07 50.051 0.0142405 0.985476 0 50.2852 GTEX-1RAZS-2926-SM-EVR4T 1 B1 1 piece; 70% adenohypophysis and 30% neurohypophysis (outlined) 5.5 Pituitary Pituitary 0000007 1341 1178 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986131 313734 0.962412 0.988266 0.761838 26983 1 76 0.00250904 272 0 1.02825e+08 0.037333 1.06157e+06 1.04046e+08 7.97548e+06 27037 5.11582e+07 0 0.200574 0.988266 0.752899 1.02825e+08 0.0038978 2.23847e+07 1.10754e+07 2.27164e+07 307 2.26749e+07 1.35249e+07 0.00320192 2.26286e+07 49.9488 0.0102029 0.990401 0 50.3678 GTEX-1RB15-0004-SM-DE1J7 B1 Blood Whole Blood 0013756 1166 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RB15-0004-SM-DLIQB B1 Blood Whole Blood 0013756 1166 BP-69563 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RB15-0005-SM-CL53N B1 7.3 Blood Whole Blood 0013756 1166 BP-69568 RNA isolation_PAXgene Blood RNA (Manual) 11/30/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.983848 789169 0.966066 0.985449 0.815102 19345 1 76 0.00277467 165 0 1.11261e+08 0.0329009 252112 1.12903e+08 1.28075e+07 19353 5.53163e+07 0 0.150964 0.985449 0.803242 1.11261e+08 0.00404318 2.51303e+07 1.12281e+08 2.53163e+07 200 2.53811e+07 2.65873e+07 0.00340789 2.52641e+07 49.8845 0.00223299 0.987051 0 50.1844 GTEX-1RB15-0326-SM-E6CQB 1 B1 2 pieces, mild interstitial fibrosis/chronic ischemic changes 8.2 Heart Heart - Left Ventricle 0006566 1737 953 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991595 499214 0.984311 0.99387 0.870121 20310 1 76 0.00206589 144 0 6.68856e+07 0.0153562 1.34863e+06 6.72981e+07 1.15408e+07 20320 3.32586e+07 0 0.11419 0.99387 0.864788 6.68856e+07 0.00324472 1.47177e+07 9.4455e+06 1.48572e+07 174 1.47971e+07 1.13317e+07 0.00265395 1.48736e+07 50.129 0.0200396 0.996146 0 50.2358 GTEX-1RB15-0426-SM-E9U4Y 1 B1 2 pieces, no abnormalities 8.2 Heart Heart - Atrial Appendage 0006631 1739 951 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991352 198563 0.98153 0.99226 0.855731 21097 1 76 0.00152117 156 0 7.06277e+07 0.0182378 1.0773e+06 7.11786e+07 2.43884e+06 21107 3.52263e+07 0 0.125799 0.99226 0.849107 7.06277e+07 0.00233371 1.50526e+07 7.53661e+06 1.5279e+07 198 1.51343e+07 1.19029e+07 0.00192707 1.52489e+07 50.1886 0.0151352 0.993168 0 50.3732 GTEX-1RB15-0826-SM-E9U4Z 1 B1 6 pieces, confirmed target muscularis 7.7 Esophagus Esophagus - Muscularis 0004648 1753 937 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990904 308639 0.971998 0.991794 0.822284 22696 1 76 0.00165075 215 0 8.45346e+07 0.0277097 651030 8.52341e+07 3.14417e+06 22721 4.2149e+07 0 0.149714 0.991794 0.815536 8.45346e+07 0.00256434 1.8351e+07 1.04752e+07 1.85495e+07 248 1.84466e+07 1.46222e+07 0.00210713 1.85246e+07 50.1055 0.00763814 0.992685 0 50.2689 GTEX-1RB15-0926-SM-E9U5Y 1 B1 6 pieces, confirmed target muscularis, trace 'contaminant' squamous mucosa 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1758 932 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 EXCLUDE 0.983664 250996 0.973948 0.984722 0.844968 21785 1 76 0.00174445 258 0 7.0752e+07 0.0256747 857945 7.18498e+07 2.87713e+06 21800 3.52415e+07 0 0.128979 0.984722 0.832059 7.0752e+07 0.00273085 1.61637e+07 6.01457e+07 1.63e+07 200 1.62496e+07 1.70022e+07 0.00223712 1.62713e+07 50.0334 0.0119408 0.98578 0 50.2099 GTEX-1RB15-1026-SM-E9U6V 1 B1 6 pieces, target mucosa extremely well preserved, good specimen, ~40-60% thickness 7 Stomach Stomach 0000945 1760 930 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986294 179758 0.980252 0.987278 0.837845 22345 1 76 0.00177181 349 0 9.36869e+07 0.0193314 1.68862e+06 9.48941e+07 3.49808e+06 22368 4.66902e+07 0 0.142407 0.987278 0.827186 9.36869e+07 0.00260975 2.14815e+07 7.48011e+07 2.16037e+07 293 2.15625e+07 2.16279e+07 0.00219036 2.15922e+07 50.0344 0.0177948 0.988263 0 50.1419 GTEX-1RB15-1126-SM-E8VMX 1 B1 2 pieces, trace interstitial fat 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1771 919 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.98225 662935 0.974159 0.984778 0.845549 24080 1 76 0.00233279 400 0 1.4333e+08 0.0253878 378809 1.45545e+08 1.25336e+07 24105 7.12459e+07 0 0.12861 0.984778 0.832678 1.4333e+08 0.00364469 3.16774e+07 3.24778e+07 3.24354e+07 349 3.27776e+07 2.81733e+07 0.00298706 3.16646e+07 49.1365 0.00260269 0.987306 0 50.5911 GTEX-1RB15-1326-SM-E76Q9 0 B1 6 pieces, squamous epithelium is ~50-60 microns, abundant dermal fat up to ~2.8mm 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1777 913 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.99279 385673 0.976345 0.99414 0.825624 24404 1 76 0.00179929 282 0 1.00451e+08 0.0234282 595030 1.01043e+08 6.00096e+06 24423 5.00596e+07 0 0.150722 0.99414 0.820786 1.00451e+08 0.00259983 2.22148e+07 1.29299e+07 2.23466e+07 330 2.2396e+07 1.79094e+07 0.00219902 2.2292e+07 49.8836 0.00588888 0.99549 0 50.1479 GTEX-1RB15-1926-SM-EV79J 1 B1 2 pieces, spermatogenesis present 6.3 Testis Testis 0000473 1813 877 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.99055 449323 0.928347 0.991626 0.725736 34567 1 76 0.00238358 286 0 1.19837e+08 0.0713267 1.86429e+06 1.20849e+08 1.28632e+07 34654 5.9716e+07 0 0.202611 0.991626 0.719658 1.19837e+08 0.00367161 2.4781e+07 1.72139e+07 2.49282e+07 306 2.49093e+07 1.75964e+07 0.0030269 2.49037e+07 49.9944 0.0154266 0.992701 0 50.148 GTEX-1RB15-2126-SM-E9TIM 0 B1 6 pieces, moderate dermal fat, focal adherent fat up to ~1.5mm, rep delineated. Squamous epithelium is ~40-50microns 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1938 752 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.982394 299567 0.976282 0.984314 0.830715 22443 1 76 0.00206874 179 0 7.02354e+07 0.0234507 342841 7.13547e+07 3.21703e+06 22461 3.49411e+07 0 0.145567 0.984314 0.817684 7.02354e+07 0.00276585 1.5397e+07 6.2949e+06 1.55125e+07 174 1.54988e+07 1.30555e+07 0.00241662 1.55407e+07 50.0675 0.00480474 0.986233 0 50.1868 GTEX-1RB15-2226-SM-DTXFZ 0 B1 2 pieces, ~15-20% interstitial fat/vascular elements 7.9 Muscle Muscle - Skeletal 0011907 2075 615 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994152 669427 0.984785 0.99546 0.887084 18951 1 76 0.00170971 202 0 8.23972e+07 0.0149966 696157 8.2773e+07 4.07425e+06 18961 4.1034e+07 0 0.0977004 0.99546 0.883057 8.23972e+07 0.0022464 1.82741e+07 8.50197e+06 1.83667e+07 214 1.84728e+07 1.7422e+07 0.0019777 1.82599e+07 49.7102 0.00841044 0.996768 0 50.1264 GTEX-1RB15-2426-SM-E8VMY 0 B1 2 pieces, confirmed target muscular artery, no significant atherosis/adherent fat 6.2 Blood Vessel Artery - Tibial 0007610 2076 614 BP-79633 RNA Extraction from Paxgene-derived Lysate Plate Based 10/19/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.982463 326640 0.975532 0.983575 0.829382 22572 1 76 0.00170037 281 0 9.81567e+07 0.0240769 492349 9.97959e+07 5.11777e+06 22596 4.88872e+07 0 0.14615 0.983575 0.81576 9.81567e+07 0.00226862 2.13682e+07 8.99268e+06 2.15874e+07 293 2.14854e+07 1.86333e+07 0.00198417 2.15776e+07 50.1071 0.00493356 0.984687 0 50.2551 GTEX-1RDX4-0005-SM-DLHBS B1 7.9 Blood Whole Blood 0013756 726 BP-69719 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2015 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.949155 605037 0.97633 0.952028 0.779486 19698 1 76 0.00254618 110 0 1.01521e+08 0.0225445 147311 1.06637e+08 8.94604e+06 19711 5.03913e+07 0 0.196844 0.952028 0.742092 1.01521e+08 0.00331156 2.37068e+07 1.75894e+08 2.38817e+07 145 2.40112e+07 2.6663e+07 0.00292772 2.38858e+07 49.8692 0.00138142 0.9549 0 50.1838 GTEX-1RDX4-0008-SM-G8OXP B1 Skin Cells - Cultured fibroblasts EFO_0002009 741 BP-75711 RNA isolation_Trizol Manual (Cell Pellet) 06/15/2016 LCSET-11677,LCSET-11989 10/06/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1RDX4-0126-SM-E9J4P 1 B1 6 pieces; well trimmed; 5% dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 741 689 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.980865 510917 0.971162 0.982065 0.786081 23392 1 76 0.00203402 189 0 8.03774e+07 0.0285651 341106 8.18454e+07 4.04912e+06 23428 4.0014e+07 0 0.185081 0.982065 0.771983 8.03774e+07 0.00294311 1.75864e+07 8.18382e+06 1.77183e+07 188 1.76751e+07 1.35104e+07 0.00248801 1.77278e+07 50.0745 0.00416769 0.983264 0 50.1868 GTEX-1RDX4-0226-SM-DTXG1 1 B1 2 pieces; high fibrous content: 80% in 1 piece 40% in other; focus of sweat glands in 1 [arrowed] 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 741 689 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994378 515367 0.977577 0.995091 0.838791 23512 1 76 0.00206358 380 0 1.0674e+08 0.0220534 408031 1.07267e+08 5.85635e+06 23546 5.31865e+07 0 0.138785 0.995091 0.834673 1.0674e+08 0.00251798 2.35812e+07 9.67003e+06 2.37049e+07 340 2.37834e+07 2.11502e+07 0.00229061 2.35774e+07 49.7825 0.00380388 0.995804 0 50.1308 GTEX-1RDX4-0526-SM-EAZ44 1 B1 2 pieces; moderate intimal sclerosis with large, 1cm, calcific deposit in 1 piece 5.8 Blood Vessel Artery - Tibial 0007610 744 686 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987171 194241 0.963991 0.987527 0.754667 24591 1 76 0.00226561 278 0 1.01774e+08 0.0356995 758758 1.03059e+08 7.82116e+06 24648 5.07536e+07 0 0.209323 0.987527 0.745254 1.01774e+08 0.00265642 2.19851e+07 1.13876e+07 2.2119e+07 268 2.20435e+07 1.49026e+07 0.00246095 2.20959e+07 50.0594 0.00736235 0.987883 0 50.1518 GTEX-1RDX4-0726-SM-E8VO8 1 B1 2 pieces; no endometrium; mostly myometrium; 25% of 1 piece is endocervix [labeled] 6.4 Uterus Uterus 0000995 786 644 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.981007 385032 0.966538 0.982177 0.694249 24428 1 76 0.00206895 174 0 9.32497e+07 0.033144 229874 9.49418e+07 5.0667e+06 24481 4.64011e+07 0 0.272288 0.982177 0.681876 9.32497e+07 0.00266615 2.03166e+07 8.24507e+06 2.04536e+07 199 2.0383e+07 1.41204e+07 0.0023672 2.05019e+07 50.1454 0.00242121 0.983348 0 50.1681 GTEX-1RDX4-0826-SM-E9TK7 1 B1 2 pieces; moderately scarred 6.4 Ovary Ovary 0000992 787 643 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985243 482353 0.969778 0.98699 0.728768 23146 1 76 0.00224243 178 0 8.86436e+07 0.0299561 377218 8.98121e+07 3.89804e+06 23190 4.4093e+07 0 0.241009 0.98699 0.719287 8.86436e+07 0.00279689 1.94676e+07 1.34399e+07 1.97097e+07 190 1.97043e+07 1.51913e+07 0.00251917 1.96287e+07 49.904 0.00420008 0.988737 0 50.309 GTEX-1RDX4-0926-SM-E9U6D 1 B1 2 pieces; well dissected 6.4 Thyroid Thyroid 0002046 790 640 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.984335 174838 0.963485 0.98547 0.729398 24485 1 76 0.00209784 138 0 7.26439e+07 0.0362097 311009 7.3715e+07 6.51213e+06 24525 3.61456e+07 0 0.234087 0.98547 0.7188 7.26439e+07 0.00274975 1.5831e+07 6.77808e+06 1.58801e+07 164 1.58838e+07 1.0088e+07 0.00242342 1.59131e+07 50.046 0.00421907 0.986604 0 50.0775 GTEX-1RDX4-1126-SM-E9U6E 1 B1 2 pieces; slight intimal sclerosis with large, 1.5cm, calcific deposit in 1 piece; large amount of perivascular fat up to 2.4cm thick 5.5 Blood Vessel Artery - Coronary 0001621 800 630 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.983346 232574 0.968156 0.98405 0.736468 23734 1 76 0.00213897 174 0 7.70651e+07 0.0314929 738782 7.83142e+07 2.94458e+06 23769 3.83933e+07 0 0.231688 0.98405 0.724721 7.70651e+07 0.00298646 1.69247e+07 1.13469e+07 1.70363e+07 180 1.69958e+07 1.11522e+07 0.00256241 1.70235e+07 50.0408 0.00943356 0.984755 0 50.1643 GTEX-1RDX4-1626-SM-EVR53 2 B1 2 pieces; moderate numbers of pigmented alveolar macrophages; scattered areas of interstitial fibrosis 5.5 Lung Lung 0008952 810 620 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.983042 175382 0.968879 0.984807 0.799926 24647 1 76 0.0024122 208 0 8.12875e+07 0.0307801 416314 8.25416e+07 6.02757e+06 24686 4.0445e+07 0 0.168953 0.984807 0.787773 8.12875e+07 0.00381662 1.76638e+07 7.5951e+06 1.78478e+07 204 1.77578e+07 1.3593e+07 0.00311315 1.78922e+07 50.1885 0.00504369 0.986572 0 50.2591 GTEX-1RDX4-1826-SM-EVR54 2 B1 6 pieces; 3 with full mucosa, 3 with minimal mucosa; muscle better preserved; full muscle on 5, scraps on 1 6 Colon Colon - Transverse 0001157 820 610 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.986493 264612 0.971462 0.988361 0.795648 25022 1 76 0.00255938 209 0 8.98287e+07 0.027689 900655 9.08865e+07 6.79353e+06 25057 4.46816e+07 0 0.175814 0.988361 0.786387 8.98287e+07 0.00389433 1.96334e+07 9.01336e+06 1.98917e+07 239 1.98482e+07 1.45749e+07 0.0032256 1.98328e+07 49.9806 0.00990966 0.990229 0 50.3268 GTEX-1RDX4-1926-SM-E6CJJ 1 B1 6 pieces; well dissected muscularis on 5, submucosa attached on 1 5.8 Colon Colon - Sigmoid 0001159 823 607 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992268 268880 0.973767 0.99335 0.801636 24719 1 76 0.00221187 281 0 1.26016e+08 0.0254583 1.01608e+06 1.26859e+08 7.8238e+06 24756 6.27352e+07 0 0.172131 0.99335 0.796305 1.26016e+08 0.00288604 2.72266e+07 1.22424e+07 2.74776e+07 315 2.73558e+07 2.09099e+07 0.00254859 2.74673e+07 50.1017 0.00800948 0.994433 0 50.2294 GTEX-1RDX4-2126-SM-EV7B3 1 B1 6 pieces; well preserved & well dissected mucosa with <5% submucosal glands 6.6 Esophagus Esophagus - Mucosa 0006920 833 597 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.98523 258816 0.974822 0.986403 0.836857 22215 1 76 0.00263702 268 0 9.43047e+07 0.0248589 1.56509e+06 9.56047e+07 1.09055e+07 22231 4.69786e+07 0 0.137965 0.986403 0.825478 9.43047e+07 0.00384537 2.10419e+07 1.1862e+07 2.12776e+07 318 2.12123e+07 1.40553e+07 0.00324048 2.12158e+07 50.0041 0.0163705 0.987576 0 50.2785 GTEX-1RDX4-2826-SM-E6CRA 1 B1 2 pieces; 5% lymphoid content; <5% fibrovascular content 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 847 583 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 EXCLUDE 0.982921 187896 0.971755 0.984506 0.738476 22052 1 76 0.00519407 110 0 5.7564e+07 0.0194332 250583 5.84699e+07 1.03635e+07 22077 2.8372e+07 0 0.233279 0.984506 0.727034 5.7564e+07 0.005867 1.31418e+07 2.17871e+07 1.28896e+07 116 1.29138e+07 8.16311e+06 0.00553 1.31968e+07 50.5419 0.00428567 0.986091 0 49.5156 GTEX-1RDX4-2926-SM-E8VOF 1 B1 6 pieces; well trimmed; almost hair free; <5% dermal fat 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 850 580 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 EXCLUDE 0.986885 777098 0.972661 0.989211 0.773294 26549 1 76 0.00237615 287 0 1.46591e+08 0.0269019 511620 1.4819e+08 1.24659e+07 26603 7.29017e+07 0 0.199367 0.989211 0.764951 1.46591e+08 0.00349657 3.21651e+07 1.44016e+07 3.27541e+07 320 3.30728e+07 2.57763e+07 0.00293504 3.21453e+07 49.2889 0.00345246 0.991537 0 50.4537 GTEX-1RDX4-3226-SM-DPS14 1 B1 4 pieces; well dissected 6.2 Brain Brain - Cerebellum 0002037 894 536 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993392 255909 0.953805 0.99437 0.76826 21817 1 76 0.00221528 116 0 5.14952e+07 0.045941 1.13097e+06 5.17868e+07 2.86015e+06 21835 2.56436e+07 0 0.185545 0.99437 0.763935 5.14952e+07 0.00299939 1.1179e+07 5.80782e+06 1.13118e+07 132 1.12746e+07 5.89130e+06 0.00260695 1.12558e+07 49.9583 0.0218391 0.995349 0 50.2953 GTEX-1RLM8-0005-SM-DO121 B1 8.1 Blood Whole Blood 0013756 745 BP-69778 RNA isolation_PAXgene Blood RNA (Manual) 12/07/2015 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.944713 166154 0.993001 0.948138 0.827907 15298 1 76 0.0024543 184 0 1.20091e+08 0.0047439 79628 1.2666e+08 1.24706e+07 15299 5.95509e+07 0 0.165094 0.948138 0.784971 1.20091e+08 0.00467883 2.95599e+07 2.43505e+08 2.94179e+07 237 2.9631e+07 3.74057e+07 0.00356255 2.97961e+07 50.1389 0.000628676 0.951564 0 49.8796 GTEX-1RLM8-0011-R2a-SM-EZ6N4 B1, A1 5.9 Brain Brain - Substantia nigra 0002038 727 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988013 167591 0.974535 0.98969 0.863272 21467 1 76 0.00286889 376 0 9.58019e+07 0.0253321 1.12765e+07 9.67998e+07 7.54642e+06 21479 4.77439e+07 0 0.111263 0.98969 0.854372 9.58019e+07 0.00398084 2.08873e+07 2.19553e+07 2.16313e+07 331 2.11739e+07 6.74271e+06 0.00342392 2.14381e+07 50.31 0.116493 0.991368 0 50.8749 GTEX-1RLM8-0011-R6a-SM-EYYXS B1, A1 5.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 727 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.9839 95819 0.977669 0.987151 0.879267 19264 1 76 0.00271981 148 0 5.47983e+07 0.0221673 8.45498e+06 5.55116e+07 1.87945e+06 19271 2.72455e+07 0 0.0984014 0.987151 0.86797 5.47983e+07 0.00399721 1.2089e+07 1.10635e+07 1.24147e+07 188 1.22727e+07 2.8228e+06 0.00335641 1.23483e+07 50.1535 0.15231 0.990402 0 50.6647 GTEX-1RLM8-0011-R8a-SM-EYYXR B1, A1 7.7 Brain Brain - Hypothalamus 0001898 727 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985452 257846 0.970834 0.989224 0.870892 22340 1 76 0.00229462 139 0 5.50582e+07 0.0288617 1.72842e+06 5.5658e+07 2.07913e+06 22352 2.73466e+07 0 0.0999419 0.989224 0.861507 5.50582e+07 0.00393271 1.2177e+07 5.29708e+06 1.23406e+07 157 1.23476e+07 7.53264e+06 0.00311054 1.23544e+07 50.0138 0.0310543 0.992995 0 50.3337 GTEX-1RLM8-0226-SM-E6CJY 1 B1 2 pieces, no abnormalities 5.5 Heart Heart - Atrial Appendage 0006631 803 1027 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994526 275437 0.982974 0.995753 0.858244 21271 1 76 0.00211596 268 0 1.06751e+08 0.016858 3.28055e+06 1.07207e+08 6.48711e+06 21283 5.31985e+07 0 0.124729 0.995753 0.8546 1.06751e+08 0.00260626 2.30328e+07 1.56058e+07 2.31406e+07 308 2.3052e+07 1.44319e+07 0.00236081 2.32195e+07 50.1811 0.0306003 0.99698 0 50.1168 GTEX-1RLM8-0526-SM-E8VOK 1 B1 6 pieces, trace atherosis 5.6 Blood Vessel Artery - Aorta 0001496 812 1018 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10945 05/01/2017 TruSeq.v1 RNASEQ 0.988638 748289 0.975105 0.99087 0.819702 25035 1 76 0.00233538 301 0 1.62142e+08 0.0243395 315402 1.63636e+08 1.3573e+07 25085 8.06253e+07 0 0.155403 0.99087 0.812218 1.62142e+08 0.00369005 3.5002e+07 1.49574e+07 3.55693e+07 325 3.58935e+07 3.5193e+07 0.00301119 3.49974e+07 49.368 0.00192746 0.993102 0 50.4019 GTEX-1RLM8-0626-SM-DKTS6 1 B1 2 pieces, trace congestion; atalectasis Lung Lung 0008952 817 1013 BP-79907 DNA Extraction from Paxgene-derived Lysate Plate Based 10/27/2016 LCSET-10450,LCSET-10654 03/03/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-1RLM8-0626-SM-DLT2O 1 B1 2 pieces, trace congestion; atalectasis Lung Lung 0008952 817 1013 BP-79907 DNA Extraction from Paxgene-derived Lysate Plate Based 10/27/2016 LCSET-10476 01/29/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RLM8-0626-SM-E76OW 1 B1 2 pieces, trace congestion; atalectasis 6 Lung Lung 0008952 817 1013 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10515 03/31/2017 TruSeq.v1 RNASEQ 0.984672 308875 0.975063 0.986067 0.811963 23904 1 76 0.00214444 164 0 8.08827e+07 0.024568 249180 8.20256e+07 5.43383e+06 23929 4.02712e+07 0 0.163101 0.986067 0.800649 8.08827e+07 0.00308536 1.80191e+07 1.88763e+07 1.81262e+07 176 1.8142e+07 1.62949e+07 0.00261424 1.81163e+07 49.9647 0.00303783 0.987461 0 50.1482 GTEX-1RLM8-0726-SM-E6CRH 2 B1 6 pieces, moderately advanced autolysis; target squamous mucosa up to ~0.2mm, partially sloughing 6.1 Esophagus Esophagus - Mucosa 0006920 826 1004 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.990648 456830 0.966972 0.992757 0.774722 23349 1 76 0.00259813 204 0 8.86193e+07 0.0328264 879226 8.92658e+07 1.61077e+07 23378 4.40804e+07 0 0.192249 0.992757 0.769111 8.86193e+07 0.00389394 1.96834e+07 1.1778e+07 1.9843e+07 227 1.9847e+07 1.15329e+07 0.00324466 1.9854e+07 50.0088 0.00984953 0.994867 0 50.2018 GTEX-1RLM8-0926-SM-EWROD 1 B1 6 pieces, confirmed target muscularis 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 834 996 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984091 280903 0.970648 0.987177 0.817023 23009 1 76 0.00250017 211 0 8.55176e+07 0.0291096 873077 8.66284e+07 5.97154e+06 23037 4.25038e+07 0 0.153625 0.987177 0.806547 8.55176e+07 0.0034481 1.83837e+07 8.85207e+06 1.86256e+07 224 1.86167e+07 1.43883e+07 0.00296157 1.86321e+07 50.0207 0.0100784 0.990263 0 50.3268 GTEX-1RLM8-1026-SM-EWROE 1 B1 2 pieces, trace fascia/mesothelium 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 836 994 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987723 203166 0.976729 0.990085 0.83492 22171 1 76 0.00267896 139 0 6.39101e+07 0.0229868 353661 6.45501e+07 4.56568e+06 22186 3.18043e+07 0 0.141809 0.990085 0.826642 6.39101e+07 0.00311451 1.39677e+07 7.05878e+06 1.41254e+07 147 1.41137e+07 1.21453e+07 0.00289112 1.4115e+07 50.0023 0.00547886 0.992448 0 50.2807 GTEX-1RLM8-1726-SM-E9TKF 1 B1 6 pieces, confirmed target muscularis. 6.2 Colon Colon - Sigmoid 0001159 882 948 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986581 631773 0.975064 0.988217 0.814504 22941 1 76 0.0022066 167 0 8.08694e+07 0.0246225 301118 8.18336e+07 3.47115e+06 22968 4.02259e+07 0 0.16056 0.988217 0.804907 8.08694e+07 0.00272362 1.75903e+07 9.07232e+06 1.77689e+07 182 1.78078e+07 1.58475e+07 0.00246468 1.76788e+07 49.8183 0.00367964 0.989854 0 50.2526 GTEX-1RLM8-2226-SM-EVYD1 1 B1 2 pieces, one with gyencomastoid stromal and duct (rep delineated) hyperplasia 6.2 Breast Breast - Mammary Tissue 0008367 914 916 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.987043 313274 0.975162 0.987892 0.825725 21847 1 76 0.00226791 202 0 8.14089e+07 0.0246125 1.6246e+06 8.24067e+07 3.78743e+06 21865 4.05583e+07 0 0.149437 0.987892 0.815727 8.14089e+07 0.00340496 1.78001e+07 1.13264e+07 1.80738e+07 233 1.79516e+07 1.09557e+07 0.00283595 1.79878e+07 50.0504 0.0197145 0.988741 0 50.3815 GTEX-1RLM8-2326-SM-EWRN4 0 B1 6 pieces, no significant dermal fat; squamous epithelium is ~30-40 microns 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 927 903 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985181 274899 0.97332 0.988339 0.808678 24038 1 76 0.00254364 208 0 8.39403e+07 0.0264332 516109 8.49308e+07 5.89498e+06 24065 4.17451e+07 0 0.164642 0.988339 0.799247 8.39403e+07 0.00342523 1.83824e+07 9.15804e+06 1.86362e+07 202 1.86491e+07 1.47904e+07 0.00297272 1.86056e+07 49.9417 0.00607682 0.991496 0 50.3429 GTEX-1RLM8-2626-SM-E8VOM 0 B1 2 pieces, trace nubbin of adherent fat, <0.5mm, delineated 5.5 Nerve Nerve - Tibial 0001323 934 896 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 EXCLUDE 0.981295 333026 0.977872 0.9825 0.839806 22035 1 76 0.0019093 200 0 7.57595e+07 0.0218311 942145 7.71089e+07 3.71382e+06 22054 3.77228e+07 0 0.138066 0.9825 0.825109 7.57595e+07 0.00251657 1.67121e+07 9.38185e+06 1.68709e+07 207 1.67845e+07 1.23749e+07 0.00221256 1.68819e+07 50.1447 0.0122184 0.983705 0 50.2364 GTEX-1RLM8-2926-SM-E8VON 0 B1 6 piecesm mild adherent dermal fat, up to ~0.5mm;squamous epithelium is ~20-30 microns 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 940 890 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10735 03/31/2017 TruSeq.v1 RNASEQ 0.98806 319783 0.97426 0.989077 0.80888 23365 1 76 0.00177525 224 0 8.66408e+07 0.0254948 409713 8.75976e+07 4.39183e+06 23393 4.31736e+07 0 0.165381 0.989077 0.800045 8.66408e+07 0.00230529 1.90643e+07 9.11667e+06 1.91984e+07 220 1.91555e+07 1.6007e+07 0.00204 1.91951e+07 50.0516 0.00467722 0.990095 0 50.1752 GTEX-1RLM8-3026-SM-E6CPC 1 B1 1 piece, adenohypophysis only 6.8 Pituitary Pituitary 0000007 1004 826 BP-79870 RNA Extraction from Paxgene-derived Lysate Plate Based 10/26/2016 LCSET-10514 03/25/2017 TruSeq.v1 RNASEQ 0.991848 526080 0.95657 0.9935 0.749125 24769 1 76 0.00236995 136 0 7.45174e+07 0.043142 268713 7.5005e+07 1.27739e+07 24808 3.70683e+07 0 0.207446 0.9935 0.744256 7.45174e+07 0.00333854 1.54877e+07 1.2471e+07 1.53345e+07 153 1.53885e+07 1.25774e+07 0.00285344 1.55471e+07 50.2562 0.0035826 0.995153 0 49.7515 GTEX-1RMOY-0003-SM-DE1IT B1 Blood Whole Blood 0013756 -75 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RMOY-0003-SM-DLIQE B1 Blood Whole Blood 0013756 -75 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RMOY-0005-SM-DO11X B1 7.9 Blood Whole Blood 0013756 -75 BP-70008 RNA isolation_PAXgene Blood RNA (Manual) 12/11/2015 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.978106 827783 0.966826 0.981919 0.807384 18209 1 76 0.00243341 150 0 1.04458e+08 0.032453 261199 1.06381e+08 8.85573e+06 18217 5.18798e+07 0 0.159442 0.981919 0.792786 1.04458e+08 0.00502745 2.40625e+07 1.36595e+08 2.41458e+07 194 2.43262e+07 2.6952e+07 0.0037254 2.42891e+07 49.9618 0.00245531 0.985732 0 50.0864 GTEX-1RMOY-0126-SM-EWRNN 1 B1 2 pieces; ~15% external fat (outlined); interstitial fibrosis with fibrous septa and micronodularity 7 Thyroid Thyroid 0002046 213 1007 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987723 360287 0.969156 0.990271 0.759047 25268 1 76 0.00260057 275 0 1.01177e+08 0.0304383 435394 1.02171e+08 7.49537e+06 25320 5.03391e+07 0 0.210108 0.990271 0.751662 1.01177e+08 0.00305427 2.20937e+07 9.46588e+06 2.23695e+07 283 2.24178e+07 1.59112e+07 0.00282153 2.22676e+07 49.832 0.00426141 0.992818 0 50.3102 GTEX-1RMOY-0626-SM-E9TIE 1 B1 2 pieces; interstitial and perivascular fibrosis (rep arrows) 8.6 Heart Heart - Left Ventricle 0006566 227 993 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98958 792985 0.984948 0.99157 0.854466 20991 1 76 0.00195421 371 0 1.07966e+08 0.0147719 2.28738e+06 1.08884e+08 4.45062e+06 21007 5.37115e+07 0 0.130482 0.99157 0.847263 1.07966e+08 0.00235705 2.37708e+07 2.26541e+07 2.38084e+07 333 2.39091e+07 1.8706e+07 0.00215523 2.38469e+07 49.9349 0.0210075 0.99356 0 50.0395 GTEX-1RMOY-0726-SM-EV79D 1 B1 2 pieces; congestion 7.2 Spleen Spleen 0002106 239 981 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988904 407119 0.959946 0.990022 0.736063 25201 1 76 0.00300667 206 0 9.67659e+07 0.0388255 614731 9.77412e+07 1.07002e+07 25247 4.81464e+07 0 0.223883 0.990022 0.728719 9.67659e+07 0.00431514 2.11698e+07 1.48018e+07 2.13456e+07 250 2.13545e+07 1.43076e+07 0.00366017 2.12596e+07 49.8887 0.00628938 0.991141 0 50.2067 GTEX-1RMOY-0826-SM-E9TIF 1 B1 2 pieces; lobulated mature adipose tissue 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 240 980 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988922 527770 0.976406 0.990694 0.827815 23379 1 76 0.00203014 217 0 8.77756e+07 0.0232686 557887 8.86001e+07 3.49402e+06 23398 4.36969e+07 0 0.148591 0.990694 0.820111 8.77756e+07 0.00254712 1.93313e+07 7.4566e+06 1.95098e+07 220 1.95115e+07 1.66014e+07 0.00228817 1.9474e+07 49.952 0.00629668 0.992466 0 50.2297 GTEX-1RMOY-0926-SM-E9TIG 1 B1 6 pieces; target muscularis 8.2 Esophagus Esophagus - Muscularis 0004648 250 970 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988782 553347 0.978259 0.990681 0.840518 22000 1 76 0.00197988 287 0 9.3217e+07 0.0214114 713133 9.40939e+07 4.03971e+06 22025 4.63972e+07 0 0.137741 0.990681 0.832685 9.3217e+07 0.00255644 2.02163e+07 7.47361e+06 2.0407e+07 267 2.04216e+07 1.75036e+07 0.00226761 2.03615e+07 49.9264 0.00757895 0.992579 0 50.2347 GTEX-1RMOY-1126-SM-EV79E 1 B1 6 pieces; gastric mucosa, submucosa and muscularis 5.9 Stomach Stomach 0000945 242 978 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.986497 261395 0.978028 0.987851 0.826319 23899 1 76 0.00268521 418 0 1.05074e+08 0.0215293 2.08691e+06 1.06366e+08 1.21966e+07 23926 5.23346e+07 0 0.151709 0.987851 0.81628 1.05074e+08 0.00393242 2.36506e+07 5.7782e+07 2.41048e+07 357 2.4027e+07 1.88906e+07 0.00330796 2.3848e+07 49.8131 0.0196201 0.989204 0 50.4755 GTEX-1RMOY-1326-SM-E9TIH 1 B1 6 pieces; hair bearing skin and periadnexal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 254 966 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.97664 333580 0.968099 0.97836 0.766176 23460 1 76 0.0021616 218 0 8.35434e+07 0.0317351 914353 8.53912e+07 3.76243e+06 23489 4.15697e+07 0 0.201923 0.97836 0.749596 8.35434e+07 0.00289304 1.81941e+07 1.00192e+07 1.84517e+07 216 1.83547e+07 1.14276e+07 0.00252667 1.84269e+07 50.0981 0.0107078 0.980081 0 50.3514 GTEX-1RMOY-1626-SM-EVYC8 1 B1 6 pieces; target muscularis (outlined); 3 pieces with colonic mucosa (arrows) 6.6 Colon Colon - Transverse 0001157 265 955 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992351 294105 0.97537 0.992969 0.824867 23475 1 76 0.0019241 212 0 8.4705e+07 0.0243221 719775 8.53047e+07 3.67623e+06 23497 4.22333e+07 0 0.150503 0.992969 0.819067 8.4705e+07 0.00287552 1.84867e+07 7.17462e+06 1.87405e+07 226 1.86546e+07 1.45423e+07 0.00239951 1.86237e+07 49.9587 0.00843769 0.993588 0 50.3409 GTEX-1RMOY-1726-SM-EVYC9 1 B1 6 pieces; target muscularis and attached serosa 7.5 Colon Colon - Sigmoid 0001159 267 953 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.993191 313561 0.974619 0.993651 0.833033 22137 1 76 0.00185759 282 0 9.20698e+07 0.0250639 782882 9.26581e+07 3.88424e+06 22159 4.59235e+07 0 0.141586 0.993651 0.827745 9.20698e+07 0.00275285 1.99283e+07 8.75848e+06 2.0229e+07 273 2.01198e+07 1.68069e+07 0.00230501 2.008e+07 49.9505 0.00844915 0.994112 0 50.3745 GTEX-1RMOY-1926-SM-EVYCA 1 B1 2 pieces; open lumina; narrow rim of adventitia 8.4 Blood Vessel Artery - Tibial 0007610 281 939 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992783 482765 0.972669 0.993284 0.831409 21207 1 76 0.00192555 281 0 9.63988e+07 0.0268722 436130 9.70505e+07 4.05817e+06 21222 4.80437e+07 0 0.14126 0.993284 0.825826 9.63988e+07 0.00294632 2.062e+07 1.03196e+07 2.08737e+07 271 2.08171e+07 1.8955e+07 0.00243568 2.07303e+07 49.8956 0.00449384 0.993785 0 50.3058 GTEX-1RNSC-0002-SM-DE1NY B1 Blood Whole Blood 0013756 385 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RNSC-0002-SM-DLIQK B1 Blood Whole Blood 0013756 385 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RNSC-0011-R11b-SM-EXUTG B1, A1 5.7 Brain Brain - Cerebellar Hemisphere 0002037 466 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10976 05/25/2017 TruSeq.v1 EXCLUDE 0.984724 217535 0.973811 0.986208 0.870583 18507 1 76 0.00231022 189 0 5.78062e+07 0.0261224 7.56687e+06 5.86146e+07 2.19459e+06 18514 2.87813e+07 0 0.103228 0.986208 0.858576 5.78062e+07 0.00292658 1.27341e+07 1.40856e+07 1.32155e+07 224 1.30535e+07 1.73785e+06 0.00261793 1.29601e+07 49.8204 0.129095 0.987692 0 50.9276 GTEX-1RNSC-0011-R5a-SM-EZ6N5 B1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 466 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987642 375267 0.972963 0.989403 0.858955 20386 1 76 0.00300076 369 0 9.41721e+07 0.026959 1.5011e+07 9.51808e+07 7.17597e+06 20396 4.69254e+07 0 0.114009 0.989403 0.849852 9.41721e+07 0.00410018 2.02236e+07 3.40782e+07 2.13436e+07 347 2.06954e+07 4.93543e+06 0.00354949 2.0961e+07 50.3188 0.15771 0.991164 0 51.3472 GTEX-1RNSC-1126-SM-E9TIP 1 B1 2 pieces, no abnormalities 5.9 Thyroid Thyroid 0002046 584 602 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.964485 246119 0.970056 0.966148 0.773392 24146 1 76 0.00224741 194 0 8.62795e+07 0.029631 988374 8.93025e+07 4.05374e+06 24178 4.2915e+07 0 0.196663 0.966148 0.747211 8.62795e+07 0.00289427 1.88307e+07 1.07344e+07 1.9068e+07 208 1.90011e+07 1.36294e+07 0.00257028 1.90431e+07 50.0551 0.0110677 0.967811 0 50.3132 GTEX-1RNSC-1226-SM-E9U52 1 B1 2 pieces, mild/moderate edema 6.7 Lung Lung 0008952 591 595 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.986152 245627 0.973842 0.986939 0.771205 23239 1 76 0.00211767 157 0 7.44732e+07 0.0257619 699691 7.54587e+07 3.02252e+06 23266 3.70989e+07 0 0.202638 0.986939 0.761132 7.44732e+07 0.00294633 1.64509e+07 1.0392e+07 1.6591e+07 171 1.65193e+07 1.23712e+07 0.00253167 1.65849e+07 50.0991 0.0092725 0.987727 0 50.212 GTEX-1RNSC-1626-SM-EVR4U 0 B1 2 pieces, trace fascia/mesothelial hyperplasia 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 604 582 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 EXCLUDE 0.927045 1.21141e+07 0.589607 0.929209 0.361872 21591 1 76 0.00187349 114 0 1.14985e+08 0.406054 3.14980e+06 1.23745e+08 9.42726e+06 21610 5.70455e+07 0 0.227734 0.929209 0.336255 1.14985e+08 0.00319084 1.47392e+07 5.82268e+08 1.58684e+07 120 1.58838e+07 7.3092e+06 0.00253063 1.50526e+07 48.6565 0.025454 0.931373 0 51.8445 GTEX-1RNSC-2926-SM-EV79L 1 B1 2 pieces, ~60% glandular/ductal elements, rep. delineated; rest is interstitial fat 7.6 Salivary Gland Minor Salivary Gland 0006330 699 487 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990661 322239 0.973609 0.991557 0.796818 25208 1 76 0.00258668 289 0 1.1586e+08 0.0257139 776055 1.16846e+08 1.06631e+07 25257 5.77202e+07 0 0.17679 0.991557 0.790091 1.1586e+08 0.0035377 2.60697e+07 1.90462e+07 2.64326e+07 320 2.63842e+07 1.95045e+07 0.00306176 2.62184e+07 49.8424 0.00664166 0.992452 0 50.3456 GTEX-1RNSC-3126-SM-EVR4V 1 B1 4 pieces, no abnormalities 5.7 Brain Brain - Cerebellum 0002037 728 458 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.981339 827629 0.946842 0.983054 0.78848 24158 1 76 0.00280191 372 0 1.48204e+08 0.0529293 9.76984e+06 1.50759e+08 9.82295e+06 24200 7.37318e+07 0 0.158362 0.983054 0.775118 1.48204e+08 0.00373316 3.16825e+07 4.70057e+07 3.26542e+07 393 3.22442e+07 9.78583e+06 0.00326672 3.22941e+07 50.0387 0.0648044 0.98477 0 50.7552 GTEX-1RNTQ-0003-SM-DE1IU B1 Blood Whole Blood 0013756 -107 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RNTQ-0003-SM-DLIQF B1 Blood Whole Blood 0013756 -107 BP-70005 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/11/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RNTQ-0006-SM-CYPRG B1 8.6 Blood Whole Blood 0013756 -107 BP-70008 RNA isolation_PAXgene Blood RNA (Manual) 12/11/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994168 1.13545e+06 0.950832 0.994987 0.826618 19422 1 76 0.00306171 212 0 9.40974e+07 0.0480931 705648 9.45715e+07 6.89673e+06 19433 4.68763e+07 0 0.124213 0.994987 0.822474 9.40974e+07 0.00342527 2.03527e+07 3.87723e+07 2.05444e+07 228 2.05841e+07 1.91413e+07 0.00324334 2.04143e+07 49.793 0.00746153 0.995806 0 50.2344 GTEX-1RNTQ-0726-SM-E9U6F 1 B1 6 pieces; up to ~0.7mm attached adventitia 7.3 Blood Vessel Artery - Aorta 0001496 482 960 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991389 476192 0.967848 0.99218 0.847514 22242 1 76 0.00183283 279 0 9.20963e+07 0.0317412 212433 9.28222e+07 3.38965e+06 22261 4.59262e+07 0 0.120334 0.99218 0.840886 9.20963e+07 0.00259512 1.96586e+07 1.6692e+07 1.98769e+07 264 1.98202e+07 1.95387e+07 0.00221367 1.97931e+07 49.9657 0.0022886 0.992971 0 50.2761 GTEX-1RNTQ-0826-SM-E9TK8 1 B1 2 pieces; lobulated mature adipose tissue with 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 485 957 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.989482 662730 0.975885 0.991267 0.825734 23439 1 76 0.00228875 277 0 1.09925e+08 0.0238102 677452 1.10893e+08 4.6301e+06 23467 5.47168e+07 0 0.150152 0.991267 0.818523 1.09925e+08 0.00284661 2.41905e+07 1.28762e+07 2.43739e+07 321 2.4417e+07 2.04717e+07 0.00256717 2.43252e+07 49.9059 0.00610905 0.993053 0 50.1888 GTEX-1RNTQ-1026-SM-EV7B4 1 B1 2 pieces; marked congestion 8.1 Spleen Spleen 0002106 492 950 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.98688 261086 0.958659 0.987885 0.748141 24202 1 76 0.00380083 120 0 6.89784e+07 0.0380338 143580 6.98243e+07 6.53054e+06 24233 3.42517e+07 0 0.210518 0.987885 0.739077 6.89784e+07 0.00509291 1.51456e+07 1.53164e+07 1.52635e+07 138 1.52754e+07 1.09642e+07 0.00444622 1.52014e+07 49.8786 0.00205631 0.988891 0 50.1938 GTEX-1RNTQ-1126-SM-E9TK9 1 B1 6 pieces; target muscularis; 3 pieces with squamous epithelium (arrows), submucosa and submucosal glands (outlined) 8.3 Esophagus Esophagus - Muscularis 0004648 500 942 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988747 560880 0.978167 0.990482 0.843041 22212 1 76 0.00214299 212 0 8.73644e+07 0.0215169 399816 8.82039e+07 3.83558e+06 22229 4.34586e+07 0 0.135127 0.990482 0.835017 8.73644e+07 0.00282679 1.8856e+07 6.68098e+06 1.9029e+07 222 1.89789e+07 1.63672e+07 0.00248429 1.90451e+07 50.0871 0.00453286 0.992217 0 50.2283 GTEX-1RQEC-0004-SM-DE1NX B1 Blood Whole Blood 0013756 1020 BP-70051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/14/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RQEC-0004-SM-DLIQ2 B1 Blood Whole Blood 0013756 1020 BP-70051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/14/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RQEC-0006-SM-CL542 B1 8 Blood Whole Blood 0013756 1020 BP-70085 RNA isolation_PAXgene Blood RNA (Manual) 12/15/2015 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.94666 495801 0.984295 0.948644 0.791133 18684 1 76 0.00209538 144 0 1.38747e+08 0.0130438 132652 1.46258e+08 1.68908e+07 18696 6.88382e+07 0 0.193162 0.948644 0.750504 1.38747e+08 0.004615 3.3265e+07 2.90076e+08 3.33812e+07 190 3.35144e+07 3.92855e+07 0.00335255 3.3442e+07 49.9459 0.000906974 0.950628 0 50.0872 GTEX-1RQEC-0011-R9a-SM-EZ6N3 B1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 1038 BP-80111 RNA isolation_PAXgene Tissue miRNA 11/02/2016 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990725 386809 0.964259 0.992224 0.838885 24466 1 76 0.0023141 294 0 1.12314e+08 0.0353688 2.76038e+06 1.13194e+08 8.14231e+06 24495 5.59637e+07 0 0.125374 0.992224 0.832362 1.12314e+08 0.00355103 2.48995e+07 1.00141e+07 2.52123e+07 330 2.50593e+07 1.60908e+07 0.00293163 2.52021e+07 50.142 0.0243863 0.993723 0 50.312 GTEX-1RQEC-0126-SM-E9J2H 1 B1 2 pieces; 10% fat in 1 piece 8.6 Muscle Muscle - Skeletal 0011907 1212 546 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.992442 504471 0.984725 0.993126 0.88813 20572 1 76 0.00149172 372 0 1.25382e+08 0.0150198 984080 1.2625e+08 5.487e+06 20583 6.25315e+07 0 0.0965949 0.993126 0.882024 1.25382e+08 0.00212055 2.727e+07 1.15431e+07 2.75553e+07 333 2.7525e+07 2.83692e+07 0.00180592 2.73773e+07 49.8655 0.0077947 0.993809 0 50.2602 GTEX-1RQEC-0226-SM-E9J3V 1 B1 2 pieces; widely patent with mild fibrous plaque & focal intimal calcification; well trimmed 8 Blood Vessel Artery - Tibial 0007610 1213 545 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985622 537480 0.975047 0.986589 0.828813 21795 1 76 0.00184644 179 0 8.18097e+07 0.0245437 244735 8.29218e+07 4.14495e+06 21817 4.07309e+07 0 0.146234 0.986589 0.817698 8.18097e+07 0.00279423 1.75613e+07 5.97894e+06 1.77147e+07 193 1.76375e+07 1.6147e+07 0.00231987 1.77188e+07 50.1149 0.00295139 0.987555 0 50.2174 GTEX-1RQEC-0426-SM-E6CHU 1 B1 6 pieces; well trimmed; 5% dermal fat; prominent dermal artery (0.4mm) in 1 piece [marked] 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1214 544 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992848 241377 0.971045 0.99389 0.771207 25048 1 76 0.00189325 233 0 9.63116e+07 0.0287343 295741 9.69037e+07 5.80014e+06 25095 4.79756e+07 0 0.199838 0.99389 0.766496 9.63116e+07 0.00251496 2.07654e+07 8.56434e+06 2.09657e+07 254 2.0865e+07 1.69059e+07 0.00220377 2.09532e+07 50.1055 0.00305191 0.994933 0 50.24 GTEX-1RQEC-0526-SM-E6CHV 1 B1 2 partly fragmented pieces; 2.3mm nerve in 1 piece [marked] 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1215 543 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992984 177814 0.977647 0.994121 0.83417 22775 1 76 0.00186025 211 0 8.36106e+07 0.0220082 430802 8.41051e+07 5.1679e+06 22801 4.16486e+07 0 0.143477 0.994121 0.829266 8.36106e+07 0.00253858 1.83813e+07 6.88428e+06 1.85181e+07 243 1.84215e+07 1.46708e+07 0.00219903 1.85606e+07 50.1881 0.00512219 0.995257 0 50.1854 GTEX-1RQEC-0926-SM-EWROG 1 B1 2 pieces; no active or chronic lesions 6.8 Heart Heart - Left Ventricle 0006566 1243 515 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989434 271756 0.982038 0.991952 0.859626 21136 1 76 0.00208519 267 0 8.73912e+07 0.0177682 2.77032e+06 8.81002e+07 5.4119e+06 21152 4.35018e+07 0 0.122412 0.991952 0.852708 8.73912e+07 0.00297796 1.93463e+07 9.77135e+06 1.94343e+07 287 1.94719e+07 1.57742e+07 0.00252001 1.94857e+07 50.0177 0.0314451 0.99447 0 50.1135 GTEX-1RQEC-1026-SM-EVR5B 2 B1 2 pieces; small [2mm] fat nodule on 1 edge 6.4 Thyroid Thyroid 0002046 1260 498 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.985467 149110 0.968044 0.987215 0.779552 23767 1 76 0.00232009 137 0 6.48979e+07 0.0316907 223811 6.57384e+07 4.87955e+06 23801 3.22878e+07 0 0.188492 0.987215 0.769585 6.48979e+07 0.00362332 1.41918e+07 6.37796e+06 1.43501e+07 150 1.43121e+07 1.03992e+07 0.00297055 1.43385e+07 50.0461 0.00340457 0.988962 0 50.2773 GTEX-1RQEC-1126-SM-EAZ5E 2 B1 2 pieces; moderate central vein and centrilobular congestion 6.2 Liver Liver 0001114 1268 490 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.977127 422598 0.97188 0.978187 0.834085 23565 1 76 0.00206482 517 0 1.49295e+08 0.0279948 2.97348e+06 1.52624e+08 1.27682e+07 23604 7.43653e+07 0 0.137795 0.978187 0.815891 1.49295e+08 0.00297039 3.28083e+07 2.52903e+07 3.35711e+07 465 3.32297e+07 1.2008e+07 0.00251712 3.327e+07 50.0303 0.0194824 0.979246 0 50.5746 GTEX-1RQEC-1926-SM-DTX7M 1 B1 3 pieces; 10% external fat content 6.5 Adrenal Gland Adrenal Gland 0002369 1289 469 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10501 03/19/2017 TruSeq.v1 RNASEQ 0.990868 534199 0.97404 0.992835 0.77961 22663 1 76 0.00197361 160 0 7.21457e+07 0.0257358 1.60008e+06 7.26663e+07 3.41982e+06 22696 3.58821e+07 0 0.194429 0.992835 0.774025 7.21457e+07 0.00236028 1.58585e+07 7.01855e+06 1.59144e+07 182 1.60719e+07 1.04655e+07 0.00216656 1.58328e+07 49.6254 0.0220196 0.994803 0 50.088 GTEX-1RQEC-2026-SM-DTXDM 1 B1 2 pieces; several ductal foci [arrowed] in elongated piece; other piece is fibrofatty without ducts (in this cut) 5.6 Breast Breast - Mammary Tissue 0008367 1296 462 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.992221 356115 0.969299 0.993081 0.773665 25117 1 76 0.0021041 376 0 1.07354e+08 0.0304082 819183 1.08102e+08 6.61746e+06 25165 5.34761e+07 0 0.195635 0.993081 0.768311 1.07354e+08 0.00259671 2.35991e+07 1.16857e+07 2.38127e+07 340 2.38225e+07 1.68412e+07 0.00235019 2.36756e+07 49.8454 0.00757786 0.993941 0 50.2252 GTEX-1RQEC-2126-SM-DPS15 2 B1 6 pieces; deep mucosa better preserved than superficial 7.1 Stomach Stomach 0000945 1298 460 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.977621 128480 0.990035 0.978642 0.897305 20418 1 76 0.00150599 302 0 7.3559e+07 0.00930154 200423 7.51643e+07 4.23605e+06 20424 3.6624e+07 0 0.0927298 0.978642 0.87814 7.3559e+07 0.00228943 1.74485e+07 1.28994e+08 1.77057e+07 197 1.76795e+07 2.67382e+07 0.0018973 1.75447e+07 49.8087 0.00266646 0.979663 0 50.3658 GTEX-1RQEC-2526-SM-EVYD2 0 B1 2 pieces; <2% stromal content 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1310 448 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990014 388734 0.976907 0.990808 0.790265 23320 1 76 0.00199931 173 0 7.87403e+07 0.0227904 532157 7.94708e+07 3.65154e+06 23343 3.92283e+07 0 0.186642 0.990808 0.783 7.87403e+07 0.00320776 1.74418e+07 8.76802e+06 1.76361e+07 202 1.75795e+07 1.2211e+07 0.00260305 1.75617e+07 49.9747 0.00669626 0.991601 0 50.2769 GTEX-1RQEC-2626-SM-EVR3Z 1 B1 6 pieces; small autolyzed mucosal remnant & fat on one piece [outlined] otherwise good muscularis 6.2 Colon Colon - Sigmoid 0001159 1315 443 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.983465 259499 0.969114 0.985467 0.823711 23779 1 76 0.00220804 272 0 9.2615e+07 0.0306682 849923 9.39809e+07 7.00709e+06 23805 4.60846e+07 0 0.145404 0.985467 0.811739 9.2615e+07 0.00374542 1.97708e+07 8.2325e+06 2.00726e+07 302 1.99795e+07 1.40044e+07 0.00297517 2.00375e+07 50.0724 0.00904357 0.987468 0 50.3787 GTEX-1RQEC-2926-SM-EVR5A 1 B1 4 pieces 5.6 Brain Brain - Cortex 0001870 1360 398 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988972 179356 0.970985 0.990772 0.85873 22981 1 76 0.00200762 268 0 7.98053e+07 0.0287493 4.77772e+06 8.05486e+07 5.366e+06 22996 3.97446e+07 0 0.112256 0.990772 0.850805 7.98053e+07 0.003301 1.75973e+07 1.39266e+07 1.77529e+07 294 1.7682e+07 7.76232e+06 0.00265314 1.77864e+07 50.1472 0.0593147 0.992572 0 50.2202 GTEX-1RQEC-3026-SM-DPRXM 2 B1 4 fragmented pieces 6.1 Brain Brain - Cerebellum 0002037 1362 396 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10500 02/22/2017 TruSeq.v1 RNASEQ 0.993739 202180 0.954544 0.994535 0.764703 22680 1 76 0.00207357 125 0 5.67302e+07 0.0452121 1.39568e+06 5.7042e+07 3.20544e+06 22700 2.82636e+07 0 0.189841 0.994535 0.760524 5.67302e+07 0.00264896 1.23107e+07 7.07866e+06 1.25352e+07 147 1.24669e+07 5.88667e+06 0.00236103 1.2413e+07 49.8917 0.0244677 0.995331 0 50.4518 GTEX-1RQED-0001-SM-DE1NW B1 Blood Whole Blood 0013756 1013 BP-70051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/14/2015 LCSET-10258 12/09/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1RQED-0001-SM-DLIP3 B1 Blood Whole Blood 0013756 1013 BP-70051 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/14/2015 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1RQED-0005-SM-DO11Z B1 7.2 Blood Whole Blood 0013756 1013 BP-70085 RNA isolation_PAXgene Blood RNA (Manual) 12/15/2015 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.966271 294415 0.987701 0.970248 0.814105 19027 1 76 0.00235808 154 0 1.03719e+08 0.011294 286800 1.069e+08 1.00978e+07 19036 5.14792e+07 0 0.173597 0.970248 0.789883 1.03719e+08 0.00504473 2.45798e+07 1.51188e+08 2.45881e+07 188 2.47569e+07 2.83848e+07 0.0036959 2.48356e+07 50.0793 0.00268289 0.974224 0 50.0084 GTEX-1RQED-0126-SM-E9U6M 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~30-40 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1025 1159 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 EXCLUDE 0.980912 124225 0.973526 0.981544 0.832209 21890 1 76 0.00199239 138 0 6.14441e+07 0.0261448 524858 6.25994e+07 3.18e+06 21906 3.0616e+07 0 0.141317 0.981544 0.81685 6.14441e+07 0.0028277 1.34754e+07 7.12872e+06 1.36321e+07 158 1.35771e+07 9.83032e+06 0.00240978 1.35721e+07 49.9908 0.00838439 0.982176 0 50.289 GTEX-1RQED-0426-SM-E6CJP 0 B1 2 pieces, ~25% interstitial/adherent fat/vascular elements, rep delineated 7.6 Muscle Muscle - Skeletal 0011907 1034 1150 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.995815 240301 0.984351 0.996806 0.883479 20750 1 76 0.0017723 274 0 1.19372e+08 0.0153891 2.10888e+06 1.19754e+08 6.37266e+06 20768 5.95278e+07 0 0.100873 0.996806 0.880657 1.19372e+08 0.0022846 2.64453e+07 1.24213e+07 2.65021e+07 286 2.64274e+07 2.44523e+07 0.0020282 2.66e+07 50.1627 0.0176101 0.997796 0 50.0536 GTEX-1RQED-0926-SM-EWRNZ 1 B1 2 pieces, a few minute colloid cysts (~1.5mm) 7.1 Thyroid Thyroid 0002046 1042 1142 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98019 483421 0.967783 0.984603 0.769446 25260 1 76 0.00280967 174 0 8.45768e+07 0.0316842 444138 8.58994e+07 6.25518e+06 25303 4.19619e+07 0 0.198337 0.984603 0.757599 8.45768e+07 0.00395602 1.84319e+07 9.16022e+06 1.86961e+07 191 1.88017e+07 1.32056e+07 0.00336687 1.86701e+07 49.8244 0.00517044 0.989017 0 50.3558 GTEX-1RQED-1026-SM-EVYCT 1 B1 2 pieces, marked congestion. Hyaline cartilage foci present, rep delineated 6.9 Lung Lung 0008952 1044 1140 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988434 302873 0.977973 0.989077 0.727183 22690 1 76 0.00237692 129 0 6.2731e+07 0.0216368 295594 6.34238e+07 3.07998e+06 22713 3.122e+07 0 0.250791 0.989077 0.719239 6.2731e+07 0.00358266 1.39988e+07 7.77251e+06 1.40935e+07 138 1.40725e+07 9.56139e+06 0.0029794 1.40617e+07 49.9809 0.00466061 0.98972 0 50.1686 GTEX-1RQED-1126-SM-EVYCU 1 B1 6 pieces, trace atherosis 7.7 Blood Vessel Artery - Aorta 0001496 1046 1138 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988884 240561 0.969789 0.989174 0.768294 22742 1 76 0.00218083 143 0 6.98291e+07 0.0297983 153934 7.05933e+07 3.32073e+06 22771 3.47757e+07 0 0.201495 0.989174 0.759977 6.98291e+07 0.00304414 1.50868e+07 6.36182e+06 1.52166e+07 155 1.5156e+07 1.20989e+07 0.00261236 1.5177e+07 50.0346 0.00218058 0.989464 0 50.2142 GTEX-1RQED-1626-SM-EAZ55 1 B1 2 pieces, moderate atrophy. Reduced spermatogenesis, marked. 6.1 Testis Testis 0000473 1066 1118 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.99096 505559 0.919452 0.991533 0.706146 33571 1 76 0.00211535 175 0 8.97925e+07 0.0802297 1.00232e+06 9.05592e+07 6.59524e+06 33640 4.47455e+07 0 0.213306 0.991533 0.700168 8.97925e+07 0.00282785 1.84542e+07 1.40426e+07 1.85576e+07 192 1.85483e+07 1.37082e+07 0.00247139 1.85099e+07 49.9482 0.0110681 0.992107 0 50.1396 GTEX-1S3DN-0001-SM-DE1IZ B1 Blood Whole Blood 0013756 -153 BP-70184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/18/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S3DN-0001-SM-DJWXL B1 Blood Whole Blood 0013756 -153 BP-70184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/18/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S3DN-0006-SM-DO127 B1 8.3 Blood Whole Blood 0013756 -153 BP-70189 RNA isolation_PAXgene Blood RNA (Manual) 12/18/2015 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.980745 376402 0.974084 0.984497 0.829913 17168 1 76 0.00227737 134 0 8.22853e+07 0.0252421 357287 8.3581e+07 7.01414e+06 17174 4.08767e+07 0 0.144171 0.984497 0.817047 8.22853e+07 0.005024 1.86384e+07 7.81991e+07 1.8712e+07 154 1.87961e+07 1.99384e+07 0.00364545 1.885e+07 50.0716 0.00427474 0.988249 0 50.0985 GTEX-1S3DN-0626-SM-E9U51 1 B1 6 pieces, atherosis up to ~0.5mm 7 Blood Vessel Artery - Aorta 0001496 216 1099 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990474 249129 0.976676 0.991267 0.832716 21544 1 76 0.00178352 142 0 7.06841e+07 0.0229524 214608 7.13068e+07 2.52887e+06 21561 3.52327e+07 0 0.14396 0.991267 0.825444 7.06841e+07 0.00266349 1.52645e+07 5.30117e+06 1.53566e+07 161 1.53125e+07 1.4387e+07 0.00222315 1.53647e+07 50.0851 0.00300964 0.99206 0 50.1503 GTEX-1S3DN-0726-SM-E9TIO 1 B1 2 pieces, ~10% epicardial fat, delineated; moderate interstitial fibrosis/chronic ischemic changes 7.9 Heart Heart - Left Ventricle 0006566 219 1096 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98983 195098 0.985047 0.991774 0.847886 19874 1 76 0.00200842 123 0 5.61841e+07 0.0147491 1.37845e+06 5.66501e+07 2.29748e+06 19884 2.79772e+07 0 0.13716 0.991774 0.840912 5.61841e+07 0.00248262 1.24041e+07 9.78745e+06 1.25418e+07 147 1.24994e+07 8.48364e+06 0.00224505 1.25344e+07 50.07 0.0243326 0.993718 0 50.2759 GTEX-1S3DN-1426-SM-EWRNO 1 B1 6 pieces, confirmed target muscularis 6.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 239 1076 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.985576 284812 0.972615 0.988732 0.785746 23706 1 76 0.00249965 205 0 8.72739e+07 0.0271768 1.0874e+06 8.82685e+07 6.16663e+06 23738 4.33949e+07 0 0.186869 0.988732 0.776892 8.72739e+07 0.00341814 1.89578e+07 7.75413e+06 1.91874e+07 237 1.91962e+07 1.25045e+07 0.00294669 1.91884e+07 49.9899 0.0123193 0.991888 0 50.3009 GTEX-1S3DN-1526-SM-EVYCB 3 B1 6 pieces, target mucosa up to ~0.5mm, advanced autolysis/sloughing 6.9 Stomach Stomach 0000945 240 1075 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989817 410133 0.96871 0.990481 0.777383 23304 1 76 0.00208331 161 0 7.70487e+07 0.0310067 509940 7.77892e+07 3.34351e+06 23337 3.8384e+07 0 0.191327 0.990481 0.769983 7.70487e+07 0.00316435 1.67407e+07 8.22567e+06 1.69063e+07 185 1.68564e+07 1.18631e+07 0.00262347 1.68431e+07 49.9803 0.00655541 0.991146 0 50.246 GTEX-1S3DN-1626-SM-EVYCC 0 B1 2 pieces, trace mesothelium/fascia 7.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 242 1073 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.993205 340524 0.978681 0.993714 0.832828 23769 1 76 0.00189666 377 0 1.04842e+08 0.0210217 481511 1.05505e+08 4.40383e+06 23803 5.22919e+07 0 0.145853 0.993714 0.827593 1.04842e+08 0.00284595 2.32021e+07 9.37513e+06 2.34663e+07 331 2.33802e+07 1.90973e+07 0.00237106 2.33403e+07 49.9572 0.00456387 0.994222 0 50.283 GTEX-1S3DN-1826-SM-EV79K 3 B1 6 pieces, target mucosa up to ~0.3mm, advanced autolysis 7 Colon Colon - Transverse 0001157 248 1067 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988143 779272 0.968912 0.98916 0.780546 26505 1 76 0.00325698 280 0 1.19032e+08 0.0286584 1.4799e+06 1.20336e+08 1.2976e+07 26563 5.90926e+07 0 0.188366 0.98916 0.772085 1.19032e+08 0.00429748 2.63254e+07 1.79898e+07 2.64556e+07 316 2.66554e+07 1.78742e+07 0.0037767 2.62281e+07 49.5959 0.0122981 0.990177 0 50.1233 GTEX-1S3DN-1926-SM-E6CIR B1 6.9 Prostate Prostate 0002367 255 1060 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992968 229916 0.975037 0.994054 0.792568 24125 1 76 0.00199502 167 0 8.09787e+07 0.0245892 333256 8.14631e+07 4.80198e+06 24164 4.03261e+07 0 0.182469 0.994054 0.787855 8.09787e+07 0.00253192 1.75919e+07 6.12903e+06 1.77746e+07 195 1.76701e+07 1.43461e+07 0.00226318 1.77747e+07 50.1476 0.00409088 0.99514 0 50.2583 GTEX-1S3DN-2126-SM-E9TIN 0 B1 6 pieces, adherent dermal fat up to ~3mm, squamous epithelium is ~25-30 microns 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 274 1041 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.979532 194857 0.972395 0.981237 0.80917 22756 1 76 0.00207229 181 0 6.97006e+07 0.02742 694445 7.10333e+07 3.07232e+06 22777 3.4696e+07 0 0.163225 0.981237 0.793988 6.97006e+07 0.00259121 1.52678e+07 7.43611e+06 1.54252e+07 180 1.53604e+07 1.06074e+07 0.0023313 1.54388e+07 50.1273 0.00977632 0.982943 0 50.2565 GTEX-1S3DN-2226-SM-EVYCD 0 B1 6 pieces, minimal dermal fat; squamous epitheliumis ~30-40 microns 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 281 1034 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990858 418904 0.971289 0.991565 0.79147 23740 1 76 0.00198276 318 0 1.01326e+08 0.0284719 515034 1.02188e+08 4.26786e+06 23772 5.05218e+07 0 0.179818 0.991565 0.784794 1.01326e+08 0.00314245 2.18648e+07 1.103e+07 2.21216e+07 316 2.20806e+07 1.73527e+07 0.00256219 2.19765e+07 49.8819 0.00504009 0.992272 0 50.2919 GTEX-1S3DN-2626-SM-EVYCE 0 B1 2 pieces, no significant atherosis; trace adherent fibrous tissue 6.2 Blood Vessel Artery - Tibial 0007610 942 373 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991212 212689 0.975088 0.991708 0.825601 21168 1 76 0.00194434 212 0 9.40348e+07 0.0245008 455009 9.4821e+07 4.05023e+06 21192 4.68738e+07 0 0.149487 0.991708 0.818755 9.40348e+07 0.00286914 2.01833e+07 6.46264e+06 2.04445e+07 251 2.03403e+07 1.80846e+07 0.00240651 2.03352e+07 49.9938 0.00479861 0.992205 0 50.3215 GTEX-1S5VW-0001-SM-DE1IW B1 Blood Whole Blood 0013756 882 BP-70184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/18/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S5VW-0001-SM-DJWXN B1 Blood Whole Blood 0013756 882 BP-70184 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/18/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S5VW-0005-SM-CYPS4 B1 7.9 Blood Whole Blood 0013756 882 BP-70189 RNA isolation_PAXgene Blood RNA (Manual) 12/18/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.953984 298352 0.986547 0.954685 0.813289 16420 1 76 0.0019366 102 0 9.69188e+07 0.0122182 176489 1.01519e+08 7.71591e+06 16423 4.82666e+07 0 0.173258 0.954685 0.776435 9.69188e+07 0.0025413 2.3092e+07 1.85404e+08 2.32881e+07 144 2.32666e+07 2.83043e+07 0.00223872 2.31832e+07 49.9102 0.00173848 0.955386 0 50.2114 GTEX-1S5VW-0426-SM-E9U6G 0 B1 2 pieces, no adherent fat; Monckeberg sclerosis, rep encircled; '20-30% occlusive atherosis 8.2 Blood Vessel Artery - Tibial 0007610 922 1402 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.991767 285152 0.975434 0.992565 0.831097 22343 1 76 0.001753 213 0 8.81817e+07 0.0241922 220749 8.88422e+07 3.10959e+06 22369 4.39579e+07 0 0.144338 0.992565 0.824918 8.81817e+07 0.00261099 1.91916e+07 7.20690e+06 1.93141e+07 239 1.92874e+07 1.77421e+07 0.00218165 1.92897e+07 50.0029 0.00248473 0.993363 0 50.1591 GTEX-1S5VW-0526-SM-E6CHL 0 B1 2 pieces, ~5-10% interstitial fat/vascular elements; rep delineated 8.4 Muscle Muscle - Skeletal 0011907 924 1400 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.995034 322059 0.98375 0.996316 0.884072 20707 1 76 0.00164605 279 0 1.34584e+08 0.0160023 1.27143e+06 1.35081e+08 7.65746e+06 20723 6.71066e+07 0 0.0996782 0.996316 0.880815 1.34584e+08 0.00219906 2.92237e+07 1.35895e+07 2.95553e+07 308 2.94589e+07 3.12364e+07 0.0019222 2.94593e+07 50.0003 0.0094123 0.997598 0 50.2821 GTEX-1S5VW-0926-SM-EWRNU 1 B1 2 pieces, moderate congestion 6.7 Lung Lung 0008952 943 1381 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986126 230522 0.975387 0.988463 0.787157 23440 1 76 0.00255593 164 0 7.86941e+07 0.0242504 190633 7.96126e+07 5.17476e+06 23471 3.91469e+07 0 0.18823 0.988463 0.778075 7.86941e+07 0.00326443 1.72885e+07 7.84165e+06 1.75041e+07 178 1.74953e+07 1.34452e+07 0.00290106 1.74628e+07 49.9535 0.00239451 0.9908 0 50.3098 GTEX-1S5VW-1326-SM-E9TKA 1 B1 2 pieces, moderate-marked interstitial fibrosis/chronic ischemic changes 5.7 Heart Heart - Left Ventricle 0006566 958 1366 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 EXCLUDE 0.979327 103143 0.993593 0.981265 0.843289 15773 1 76 0.00239422 369 0 8.45425e+07 0.00638781 6.9129e+06 8.61566e+07 3.59231e+06 15773 4.20787e+07 0 0.150304 0.981265 0.82749 8.45425e+07 0.00279876 1.83528e+07 5.69137e+07 1.85199e+07 365 1.85066e+07 3.03022e+06 0.00259609 1.8498e+07 49.9884 0.0802364 0.983204 0 50.2265 GTEX-1S5VW-1826-SM-EAZ53 1 B1 2 pieces, macrovesicular steatosis, moderate 5.5 Liver Liver 0001114 986 1338 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988337 269109 0.978741 0.989259 0.875877 19290 1 76 0.00224235 265 0 7.36847e+07 0.0211183 2.05094e+06 7.44848e+07 6.40319e+06 19300 3.67236e+07 0 0.102864 0.989259 0.866469 7.36847e+07 0.00292797 1.64272e+07 1.24243e+07 1.67001e+07 294 1.65983e+07 6.83994e+06 0.00258484 1.65849e+07 49.9798 0.027535 0.990181 0 50.4119 GTEX-1S5VW-2426-SM-EAZ52 1 B1 2 pieces, trace fascia 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1005 1319 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.98366 393329 0.974248 0.984441 0.7961 23912 1 76 0.00220141 275 0 1.0004e+08 0.0254475 516944 1.01621e+08 8.72211e+06 23948 4.98235e+07 0 0.178148 0.984441 0.783714 1.0004e+08 0.00323069 2.19925e+07 1.23606e+07 2.21934e+07 289 2.21088e+07 1.64098e+07 0.00271564 2.21627e+07 50.0609 0.00508699 0.985222 0 50.2274 GTEX-1S5VW-2626-SM-EVR4W 2 B1 2 pieces, spermatogenesis appears reduced 5.5 Testis Testis 0000473 1010 1314 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519,LCSET-11115 05/31/2017 TruSeq.v1 RNASEQ 0.989814 606262 0.927475 0.991039 0.734356 36260 1 76 0.00233684 396 0 1.76218e+08 0.0721737 2.48142e+06 1.77812e+08 1.02937e+07 36365 8.77913e+07 0 0.19312 0.991039 0.727775 1.76218e+08 0.00289615 3.63443e+07 2.40311e+07 3.67584e+07 340 3.6723e+07 2.72331e+07 0.00261615 3.6566e+07 49.8929 0.0139553 0.992264 0 50.2832 GTEX-1S5VW-2926-SM-E9U6H 3 B1 4 pieces, mucosa up to ~0.6mm, glandular mucosa autolyzed, mainly lamina propria 6.4 Colon Colon - Transverse 0001157 1037 1287 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.978579 161499 0.971017 0.979292 0.833532 23651 1 76 0.00195287 206 0 8.09123e+07 0.0286275 1.42995e+06 8.26232e+07 3.6292e+06 23667 4.03212e+07 0 0.137485 0.979292 0.816271 8.09123e+07 0.00280276 1.77309e+07 8.05845e+06 1.79269e+07 242 1.78461e+07 1.27291e+07 0.0023775 1.78705e+07 50.0342 0.0173069 0.980005 0 50.2749 GTEX-1S5VW-3026-SM-EV7B5 1 B1 1 piece, mainly adenohypophysis; ~3mm nubbin of neurohypophysis, delineated 6.1 Pituitary Pituitary 0000007 1236 1088 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990367 331708 0.962455 0.991457 0.759622 25301 1 76 0.00251164 203 0 8.6367e+07 0.037333 576647 8.71113e+07 9.34312e+06 25344 4.30247e+07 0 0.202833 0.991457 0.753132 8.6367e+07 0.00396228 1.85111e+07 9.68116e+06 1.86855e+07 224 1.86491e+07 1.237e+07 0.00323616 1.86378e+07 49.9848 0.00661966 0.992546 0 50.2343 GTEX-1S5ZA-0004-SM-DE1J6 B1 Blood Whole Blood 0013756 -280 BP-70275 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S5ZA-0004-SM-DJWYF B1 Blood Whole Blood 0013756 -280 BP-70275 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S5ZA-0005-SM-CYPS2 B1 8.2 Blood Whole Blood 0013756 -280 BP-70222 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.988255 585883 0.970055 0.989078 0.827494 18032 1 76 0.00264153 158 0 9.35348e+07 0.0293223 328405 9.45676e+07 7.17524e+06 18042 4.66125e+07 0 0.142561 0.989078 0.818456 9.35348e+07 0.00308085 2.12425e+07 8.18455e+07 2.14317e+07 179 2.14363e+07 2.25288e+07 0.002861 2.13233e+07 49.8679 0.0034727 0.989901 0 50.2217 GTEX-1S5ZA-0126-SM-EVYCV 0 B1 6 pieces, trace dermal fat; squamous epithelium is ~30-40 microns 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 237 475 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989053 186997 0.970155 0.989363 0.81557 22415 1 76 0.00208302 180 0 6.89548e+07 0.0296279 526709 6.96961e+07 3.01889e+06 22437 3.43741e+07 0 0.154585 0.989363 0.806895 6.89548e+07 0.00316983 1.49967e+07 7.51177e+06 1.51563e+07 170 1.50631e+07 1.17307e+07 0.00262625 1.51114e+07 50.08 0.00755722 0.989674 0 50.2646 GTEX-1S5ZA-0326-SM-EWRN5 0 B1 2 pieces, pristine specimen 7.6 Nerve Nerve - Tibial 0001323 244 468 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.986257 405824 0.968895 0.989913 0.819479 24769 1 76 0.00253353 292 0 1.10629e+08 0.0308037 481532 1.11756e+08 8.05305e+06 24810 5.50021e+07 0 0.149416 0.989913 0.811213 1.10629e+08 0.00323018 2.40408e+07 1.24187e+07 2.44092e+07 322 2.4465e+07 1.98275e+07 0.00287242 2.43486e+07 49.8808 0.00430878 0.993568 0 50.3802 GTEX-1S5ZA-0426-SM-E6CJR 0 B1 2 pieces, trace adherent fibrous tissue; no atherosis 7.9 Blood Vessel Artery - Tibial 0007610 245 467 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993629 335622 0.977412 0.994707 0.864232 20660 1 76 0.00181948 213 0 9.0206e+07 0.0220988 396612 9.06861e+07 5.50838e+06 20681 4.49219e+07 0 0.11318 0.994707 0.859657 9.0206e+07 0.00249791 1.92389e+07 5.62491e+06 1.93931e+07 249 1.92952e+07 1.95291e+07 0.00215833 1.94238e+07 50.1661 0.00437346 0.995784 0 50.1996 GTEX-1S5ZA-0526-SM-EWRO1 0 B1 2 pieces, interstitial fat/vascular elements are ~10% of tissue, rep delineated 7.7 Muscle Muscle - Skeletal 0011907 252 460 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.989537 350277 0.98225 0.992752 0.873536 21191 1 76 0.00239764 286 0 1.22501e+08 0.0175188 1.79306e+06 1.23395e+08 8.23383e+06 21209 6.09625e+07 0 0.108714 0.992752 0.867205 1.22501e+08 0.00312692 2.66897e+07 1.2978e+07 2.70061e+07 318 2.69544e+07 2.33324e+07 0.00275257 2.70539e+07 50.0921 0.0145311 0.995967 0 50.2947 GTEX-1S5ZA-0926-SM-EVR55 1 B1 6 pieces, confirmed target muscularis, trace 'contaminant' mucosa 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 273 439 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.99038 336321 0.978295 0.992331 0.861027 23179 1 76 0.00223825 282 0 1.18215e+08 0.0213695 753549 1.19128e+08 9.21626e+06 23198 5.88637e+07 0 0.117268 0.992331 0.854424 1.18215e+08 0.00346328 2.52479e+07 9.7249e+06 2.57524e+07 320 2.56567e+07 2.40754e+07 0.00284956 2.55499e+07 49.8957 0.00632553 0.994283 0 50.4946 GTEX-1S5ZA-1026-SM-EWRO2 1 B1 2 pieces, ~10-15% fascia/mesothelial hyperplasia 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 275 437 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984183 186543 0.975867 0.988463 0.84755 21487 1 76 0.00260533 157 0 6.53169e+07 0.0239099 996988 6.60792e+07 4.56716e+06 21506 3.24484e+07 0 0.128316 0.988463 0.837772 6.53169e+07 0.0036778 1.4324e+07 6.2247e+06 1.44858e+07 166 1.44901e+07 1.02797e+07 0.00312671 1.45694e+07 50.1364 0.0150878 0.992743 0 50.2809 GTEX-1S5ZA-1126-SM-EVYBU 1 B1 6 pieces, trace atherosis 8.2 Blood Vessel Artery - Aorta 0001496 277 435 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.992046 185403 0.979137 0.99235 0.872922 22204 1 76 0.00183735 281 0 9.6835e+07 0.0204175 309108 9.75815e+07 3.82583e+06 22221 4.83141e+07 0 0.106216 0.99235 0.866244 9.6835e+07 0.00268308 2.09683e+07 7.14517e+06 2.12002e+07 295 2.11378e+07 2.20995e+07 0.00226009 2.10615e+07 49.9096 0.00316769 0.992654 0 50.2749 GTEX-1S5ZA-1326-SM-EV7BB 1 B1 6 pieces, target lymphoid aggregates are ~20% of tissue, rep delineated; good specimen 6.3 Small Intestine Small Intestine - Terminal Ileum 0001211 283 429 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988786 233799 0.962849 0.989854 0.749692 26295 1 76 0.00285709 275 0 9.4791e+07 0.0367828 917191 9.57626e+07 1.09061e+07 26345 4.72241e+07 0 0.213157 0.989854 0.742085 9.4791e+07 0.00391857 2.06259e+07 1.04021e+07 2.0851e+07 271 2.07614e+07 1.24814e+07 0.00338726 2.08065e+07 50.0542 0.00957776 0.990922 0 50.2714 GTEX-1S5ZA-1426-SM-E6CJQ 1 B1 6 pieces, confirmed target muscularis 7 Colon Colon - Sigmoid 0001159 289 423 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99433 189756 0.975236 0.995377 0.823673 22545 1 76 0.00198263 209 0 8.0205e+07 0.0244876 647851 8.05775e+07 4.85942e+06 22568 3.99656e+07 0 0.151562 0.995377 0.819866 8.0205e+07 0.00249204 1.74368e+07 6.64123e+06 1.75984e+07 217 1.75117e+07 1.42834e+07 0.00223706 1.75944e+07 50.1178 0.0080401 0.996425 0 50.2307 GTEX-1S5ZA-1626-SM-E9TKG 1 B1 2 pieces, glandular hyerplasia 6.6 Prostate Prostate 0002367 301 411 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.984215 415346 0.968857 0.986096 0.79519 24195 1 76 0.00225942 163 0 7.54667e+07 0.0308931 449240 7.65308e+07 3.29491e+06 24230 3.75223e+07 0 0.173667 0.986096 0.784134 7.54667e+07 0.00291854 1.63519e+07 5.86616e+06 1.65403e+07 181 1.64756e+07 1.20262e+07 0.00258835 1.65499e+07 50.1124 0.00587005 0.987977 0 50.2864 GTEX-1S5ZU-0004-SM-DE1J3 B1 Blood Whole Blood 0013756 454 BP-70275 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S5ZU-0004-SM-DJWX6 B1 Blood Whole Blood 0013756 454 BP-70275 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/23/2015 LCSET-10394,LCSET-10575 02/10/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S5ZU-0005-SM-CYPS3 B1 7.3 Blood Whole Blood 0013756 454 BP-70222 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2015 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.983659 333136 0.977139 0.984519 0.789362 18946 1 76 0.00231282 118 0 8.22918e+07 0.0223454 312511 8.35858e+07 5.94463e+06 18958 4.10031e+07 0 0.187777 0.984519 0.777142 8.22918e+07 0.00307843 1.90529e+07 8.70871e+07 1.91523e+07 141 1.91514e+07 1.96586e+07 0.00269529 1.91335e+07 49.9766 0.0037388 0.985379 0 50.1301 GTEX-1S5ZU-0226-SM-E6CHW 0 B1 2 pieces; 10% fibrous content 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 485 593 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.991526 256869 0.974563 0.992858 0.803654 23667 1 76 0.00192833 280 0 1.0824e+08 0.0250955 647219 1.09018e+08 6.76743e+06 23707 5.39027e+07 0 0.170909 0.992858 0.797914 1.0824e+08 0.00241969 2.36079e+07 9.90547e+06 2.38463e+07 318 2.37444e+07 1.9055e+07 0.00217368 2.38378e+07 50.0982 0.00593678 0.99419 0 50.2512 GTEX-1S5ZU-0526-SM-E9U4S 1 B1 2 pieces; no lesions; external fat on 1 piece 7.9 Blood Vessel Artery - Tibial 0007610 503 575 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.988915 336895 0.974681 0.989831 0.832698 20729 1 76 0.0017366 160 0 7.25825e+07 0.0248931 366227 7.33281e+07 2.81679e+06 20745 3.61541e+07 0 0.141982 0.989831 0.824231 7.25825e+07 0.00271352 1.57646e+07 5.55384e+06 1.58341e+07 172 1.5811e+07 1.43355e+07 0.0022246 1.5854e+07 50.0679 0.00499436 0.990747 0 50.11 GTEX-1S5ZU-0726-SM-EWROH 2 B1 2 pieces; no lesions; well trimmed 6.3 Thyroid Thyroid 0002046 559 519 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.982422 175369 0.962304 0.984812 0.743408 23787 1 76 0.00241775 165 0 8.51926e+07 0.0374623 568768 8.65065e+07 5.89595e+06 23820 4.2372e+07 0 0.218896 0.984812 0.732117 8.51926e+07 0.00306918 1.8413e+07 8.09309e+06 1.86972e+07 196 1.86678e+07 1.24576e+07 0.00273506 1.86282e+07 49.9469 0.00657486 0.987202 0 50.3829 GTEX-1S5ZU-2326-SM-EAZ5B 1 B1 2 pieces; ovum present 6 Ovary Ovary 0000992 629 449 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987741 382057 0.963515 0.98857 0.751082 23266 1 76 0.00211746 217 0 9.53286e+07 0.0362523 398093 9.64308e+07 8.44722e+06 23302 4.74843e+07 0 0.212433 0.98857 0.742497 9.53286e+07 0.003085 2.08163e+07 1.18536e+07 2.09678e+07 226 2.08985e+07 1.59179e+07 0.00260082 2.09744e+07 50.0905 0.00412828 0.989399 0 50.1812 GTEX-1S5ZU-2526-SM-E6CIF 1 B1 4 pieces; well trimmed; <2% dermal fat 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 625 453 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99282 256379 0.973386 0.994009 0.75805 24122 1 76 0.00195835 230 0 9.78012e+07 0.0263634 506085 9.83906e+07 6.34254e+06 24164 4.87104e+07 0 0.215336 0.994009 0.753508 9.78012e+07 0.00251647 2.14386e+07 8.73072e+06 2.15989e+07 243 2.14964e+07 1.75751e+07 0.00223708 2.16447e+07 50.1719 0.00514363 0.995198 0 50.1862 GTEX-1S5ZU-2626-SM-E9TII 2 B1 6 pieces; epithelium largely sloughed 5.9 Vagina Vagina 0000996 635 443 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.951512 165651 0.966232 0.95309 0.789703 22309 1 76 0.00211759 170 0 7.30843e+07 0.0335294 1.93298e+06 7.66814e+07 3.62422e+06 22327 3.63476e+07 0 0.176529 0.95309 0.752658 7.30843e+07 0.00287234 1.60573e+07 7.53563e+06 1.62699e+07 188 1.62093e+07 1.0604e+07 0.00249434 1.62355e+07 50.0403 0.0252079 0.954668 0 50.3287 GTEX-1S82P-0002-SM-DE1IY B1 Blood Whole Blood 0013756 -139 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S82P-0002-SM-DJWXK B1 Blood Whole Blood 0013756 -139 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S82P-0005-SM-CM2RX B1 7.2 Blood Whole Blood 0013756 -139 BP-70291 RNA isolation_PAXgene Blood RNA (Manual) 12/23/2015 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.991087 819748 0.96424 0.992408 0.829988 17917 1 76 0.00217983 160 0 9.57419e+07 0.0353624 406675 9.64744e+07 5.05118e+06 17922 4.76713e+07 0 0.134252 0.992408 0.823687 9.57419e+07 0.00297188 2.15054e+07 7.95397e+07 2.16036e+07 184 2.16417e+07 2.24697e+07 0.00257533 2.16171e+07 49.9716 0.00421537 0.993728 0 50.1138 GTEX-1S82P-0226-SM-E6CI6 1 B1 2 pieces; mature adipose tissue with 60% and 15% dense connective tissue component 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 281 604 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993804 323999 0.978809 0.99501 0.83131 22480 1 76 0.00191567 218 0 8.70054e+07 0.0208778 283087 8.74417e+07 5.28359e+06 22507 4.33442e+07 0 0.147499 0.99501 0.827162 8.70054e+07 0.00252767 1.91755e+07 6.97881e+06 1.93533e+07 230 1.9268e+07 1.68602e+07 0.0022213 1.93548e+07 50.1124 0.00323744 0.996215 0 50.2308 GTEX-1S82P-0326-SM-E9TIR 1 B1 2 pieces; small amounts of external fat 8.6 Muscle Muscle - Skeletal 0011907 284 601 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.989689 517463 0.983498 0.991663 0.876858 19451 1 76 0.00193111 210 0 8.32902e+07 0.016277 1.0946e+06 8.39903e+07 3.51612e+06 19462 4.14582e+07 0 0.10664 0.991663 0.869548 8.32902e+07 0.00254309 1.81612e+07 9.7133e+06 1.8426e+07 214 1.84418e+07 1.72985e+07 0.00223649 1.82903e+07 49.7937 0.0130325 0.993638 0 50.3619 GTEX-1S82P-0526-SM-EVR4N 1 B1 2 pieces; medial calcifications (outlined); atherosis; lumina patent 7.9 Blood Vessel Artery - Tibial 0007610 289 596 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988961 226004 0.974669 0.990761 0.847697 21632 1 76 0.00211293 286 0 1.03116e+08 0.0249066 366779 1.04078e+08 7.65398e+06 21653 5.13388e+07 0 0.126973 0.990761 0.839865 1.03116e+08 0.00346008 2.20801e+07 7.79766e+06 2.23601e+07 303 2.22933e+07 2.05404e+07 0.00278528 2.23185e+07 50.0282 0.00352408 0.992561 0 50.3151 GTEX-1S82P-0726-SM-EVR4O 1 B1 1 piece; 80% glandular and ductal elements and attached skeletal muscle, trace of fat and fibrovascular tissue (arrows); internal fat (outlined) 7.6 Salivary Gland Minor Salivary Gland 0006330 275 610 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988589 343494 0.974747 0.99042 0.812232 25052 1 76 0.00234874 396 0 1.28576e+08 0.0247782 591682 1.29819e+08 9.5229e+06 25095 6.40059e+07 0 0.162515 0.99042 0.80445 1.28576e+08 0.00352653 2.89929e+07 2.26349e+07 2.92586e+07 337 2.92368e+07 2.28298e+07 0.00293655 2.92366e+07 49.9999 0.00455774 0.99225 0 50.2281 GTEX-1S82P-0826-SM-EVR4P 1 B1 2 pieces; congestion and focal alveolar collapse; thick walled vessels; 7.7 Lung Lung 0008952 301 584 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.990019 471108 0.96808 0.991827 0.784565 25861 1 76 0.00238726 284 0 1.29443e+08 0.0313282 430890 1.3051e+08 9.84478e+06 25914 6.44349e+07 0 0.183515 0.991827 0.778153 1.29443e+08 0.0035491 2.8569e+07 1.57445e+07 2.88044e+07 323 2.87953e+07 2.33418e+07 0.00296712 2.87929e+07 49.9979 0.00330159 0.993635 0 50.2052 GTEX-1S82P-0926-SM-EWRNP 1 B1 2 fragmented pieces; lobulated mature adipose tissue 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 304 581 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988606 347292 0.976031 0.99167 0.824374 22720 1 76 0.00243187 160 0 7.15974e+07 0.0235853 319926 7.21988e+07 4.94246e+06 22741 3.56075e+07 0 0.151657 0.99167 0.817507 7.15974e+07 0.00315569 1.57544e+07 6.92441e+06 1.59289e+07 168 1.5957e+07 1.27542e+07 0.0027842 1.59188e+07 49.9401 0.00443118 0.994733 0 50.2753 GTEX-1S82P-1026-SM-EAZ4W 1 B1 2 pieces; mild autolysis of parenchyma and septal fat; mild interstitial fibrosis; preserved Langerhans islets (rep outlined); scattered pancreatic ducts lined by mucinous rich cytoplasm cells/Pan1N (arrows) 7.5 Pancreas Pancreas 0001150 310 575 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.993306 432913 0.978242 0.994012 0.857638 22711 1 76 0.00231695 158 0 1.2117e+08 0.0213609 270138 1.219e+08 1.04093e+07 22732 6.04121e+07 0 0.120604 0.994012 0.852502 1.2117e+08 0.00303387 2.78332e+07 3.56376e+07 2.81558e+07 198 2.80364e+07 3.85481e+07 0.00267516 2.80364e+07 50 0.00221606 0.994718 0 50.2881 GTEX-1S82P-1126-SM-EV79M 1 B1 2 pieces; mildly autolyzed adrenal cortex; ~15% external fat (outlined) 9.1 Adrenal Gland Adrenal Gland 0002369 316 569 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.992472 397311 0.975448 0.993751 0.826031 23588 1 76 0.00238233 271 0 1.01488e+08 0.0241701 1.25833e+06 1.02127e+08 1.09032e+07 23623 5.05587e+07 0 0.149417 0.993751 0.820869 1.01488e+08 0.00390989 2.24177e+07 1.0233e+07 2.25925e+07 311 2.2579e+07 1.77568e+07 0.00314513 2.25417e+07 49.9587 0.0123213 0.995029 0 50.1942 GTEX-1S82P-1626-SM-EVR4Q 1 B1 5 pieces; well trimmed target muscularis 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 349 536 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987164 269280 0.973923 0.989404 0.821987 23891 1 76 0.00223228 282 0 1.12424e+08 0.0257891 785095 1.13628e+08 8.5277e+06 23927 5.59589e+07 0 0.151936 0.989404 0.813278 1.12424e+08 0.00382171 2.44435e+07 1.05325e+07 2.47534e+07 319 2.47117e+07 1.93874e+07 0.0030252 2.47115e+07 49.9997 0.00690935 0.991645 0 50.3149 GTEX-1S82P-2026-SM-E9TIQ 1 B1 5 pieces; two pieces with small fragments of mucosa and serosal fat (outlined); 7.1 Colon Colon - Sigmoid 0001159 364 521 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986099 309135 0.975624 0.987738 0.82278 22316 1 76 0.00208061 163 0 6.94792e+07 0.0240778 469414 7.03418e+07 3.11968e+06 22334 3.45756e+07 0 0.152844 0.987738 0.812691 6.94792e+07 0.00264929 1.51641e+07 5.74831e+06 1.52888e+07 173 1.52638e+07 1.1636e+07 0.00236448 1.52961e+07 50.0528 0.00667333 0.989376 0 50.2047 GTEX-1S82P-2126-SM-E6CI5 1 B1 6 pieces; small amounts of periadnexal fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 353 532 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992526 220627 0.974978 0.993907 0.801543 22074 1 76 0.00193852 161 0 6.89775e+07 0.0248068 248904 6.94004e+07 4.51225e+06 22098 3.43553e+07 0 0.173435 0.993907 0.79666 6.89775e+07 0.00260684 1.51279e+07 6.27326e+06 1.52961e+07 163 1.52354e+07 1.23469e+07 0.00227222 1.52735e+07 50.0624 0.00358649 0.995289 0 50.2765 GTEX-1S82U-0004-SM-DE1J4 B1 Blood Whole Blood 0013756 -107 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S82U-0004-SM-DJWY5 B1 Blood Whole Blood 0013756 -107 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S82U-0005-SM-CYPRW B1 9.2 Blood Whole Blood 0013756 -107 BP-70324 RNA isolation_PAXgene Blood RNA (Manual) 12/28/2015 LCSET-9770,LCSET-9874 09/29/2016 TruSeq.v1 RNASEQ 0.99232 1.24934e+06 0.953068 0.993269 0.799144 19598 1 76 0.00233884 207 0 1.12113e+08 0.0464603 367315 1.12873e+08 5.30301e+06 19616 5.58582e+07 0 0.153925 0.993269 0.793764 1.12113e+08 0.0027683 2.46263e+07 7.58741e+07 2.48614e+07 251 2.49221e+07 2.40236e+07 0.00255337 2.47014e+07 49.7777 0.00325425 0.994218 0 50.2375 GTEX-1S82U-0726-SM-E9TKI 1 B1 6 pieces, target mucosa well preserved, up to ~0.5mm, ~10% of thickness in 4/6 sections 7.8 Colon Colon - Transverse 0001157 148 1223 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988903 546075 0.980165 0.990696 0.864104 21719 1 76 0.00182331 219 0 8.80688e+07 0.0195173 655891 8.88958e+07 3.76764e+06 21738 4.38191e+07 0 0.116061 0.990696 0.856065 8.80688e+07 0.00248064 1.91159e+07 7.76585e+06 1.92946e+07 249 1.93021e+07 1.71422e+07 0.00215138 1.9253e+07 49.9363 0.0073782 0.99249 0 50.2326 GTEX-1S82U-1026-SM-E6CJK 0 B1 6 pieces, squamous epithelium is ~35-40 microns; adherent nubbins dermal fat up to ~1.5mm, delineated 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 157 1214 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993795 270277 0.976484 0.994895 0.80516 23297 1 76 0.00175817 295 0 1.0994e+08 0.0232934 560937 1.10504e+08 6.76881e+06 23327 5.47932e+07 0 0.171323 0.994895 0.80105 1.0994e+08 0.00230603 2.42679e+07 1.12627e+07 2.44663e+07 305 2.43653e+07 1.92559e+07 0.0020318 2.44719e+07 50.1092 0.00507619 0.995994 0 50.2036 GTEX-1S82U-1126-SM-E9U6I 0 B1 2 pieces, adipose elements only 6.6 Breast Breast - Mammary Tissue 0008367 159 1212 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.99175 268261 0.974595 0.992634 0.819054 24122 1 76 0.00172371 276 0 9.83968e+07 0.0250583 618008 9.91269e+07 3.55803e+06 24153 4.90671e+07 0 0.155541 0.992634 0.813021 9.83968e+07 0.00259834 2.15806e+07 1.01336e+07 2.18823e+07 313 2.18011e+07 1.77361e+07 0.00216064 2.17421e+07 49.9323 0.00623451 0.993518 0 50.347 GTEX-1S82U-1226-SM-E9TKB 1 B1 2 pieces, myometrium only 7.3 Uterus Uterus 0000995 161 1210 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985258 230891 0.976924 0.986627 0.849325 21407 1 76 0.00180104 146 0 6.72376e+07 0.0226939 165371 6.81489e+07 2.83689e+06 21426 3.3465e+07 0 0.127598 0.986627 0.837968 6.72376e+07 0.00236161 1.46469e+07 4.70907e+06 1.47902e+07 162 1.47107e+07 1.3567e+07 0.00208093 1.48155e+07 50.1775 0.00242661 0.987997 0 50.2435 GTEX-1S82U-1326-SM-E9U6J 0 B1 2 pieces, trace adherent fat 7 Nerve Nerve - Tibial 0001323 164 1207 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.992055 319393 0.975094 0.992964 0.824269 23233 1 76 0.00170715 225 0 8.85936e+07 0.0245701 257737 8.92213e+07 3.40009e+06 23257 4.41665e+07 0 0.150825 0.992964 0.81847 8.85936e+07 0.00267622 1.95946e+07 7.11740e+06 1.97142e+07 237 1.9672e+07 1.72668e+07 0.00219124 1.97155e+07 50.0552 0.00288874 0.993874 0 50.1521 GTEX-1S82U-1426-SM-E6CJL 0 B1 2 pieces, trace interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 165 1206 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.995044 363254 0.987679 0.99643 0.890979 20627 1 76 0.00154577 280 0 1.42333e+08 0.0119966 1.38301e+06 1.42843e+08 8.87155e+06 20640 7.09506e+07 0 0.0966993 0.99643 0.887798 1.42333e+08 0.00208026 3.12677e+07 1.8403e+07 3.17061e+07 317 3.15625e+07 2.86502e+07 0.00181264 3.15662e+07 50.0029 0.00968201 0.997815 0 50.3481 GTEX-1S82Y-0004-SM-DE1IX B1 Blood Whole Blood 0013756 -211 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S82Y-0004-SM-DJWXO B1 Blood Whole Blood 0013756 -211 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S82Y-0005-SM-DO123 B1 7.6 Blood Whole Blood 0013756 -211 BP-70324 RNA isolation_PAXgene Blood RNA (Manual) 12/28/2015 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.980259 846564 0.958449 0.984729 0.81373 18406 1 76 0.00270701 135 0 7.86983e+07 0.0407267 305365 7.99188e+07 8.04217e+06 18409 3.90491e+07 0 0.144719 0.984729 0.801304 7.86983e+07 0.00558902 1.74158e+07 7.07859e+07 1.76451e+07 143 1.7747e+07 1.82667e+07 0.00414147 1.7662e+07 49.88 0.00382094 0.989199 0 50.327 GTEX-1S82Y-1026-SM-EV7BJ 1 B1 2 pieces, moderate congestion 5.5 Liver Liver 0001114 449 444 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.97629 212089 0.972539 0.977783 0.844 21364 1 76 0.00266807 367 0 8.69249e+07 0.0270485 878591 8.89e+07 9.96494e+06 21382 4.32706e+07 0 0.128539 0.977783 0.825249 8.69249e+07 0.00438973 1.9122e+07 1.33749e+07 1.96774e+07 337 1.94894e+07 6.08764e+06 0.00352759 1.94104e+07 49.8984 0.00988291 0.979275 0 50.7157 GTEX-1S82Y-1226-SM-EV7BD 1 B1 6 pieces, squamous mucosa up to ~0.6mm, ~20-25% thickness. Submucosal mucus glands present, rep delineated 6.6 Esophagus Esophagus - Mucosa 0006920 465 428 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.984697 247951 0.970357 0.985657 0.791945 22599 1 76 0.00253899 202 0 8.62715e+07 0.0294362 770342 8.75269e+07 9.35617e+06 22628 4.29725e+07 0 0.178412 0.985657 0.780587 8.62715e+07 0.00395696 1.93304e+07 1.04699e+07 1.95762e+07 239 1.94764e+07 1.19449e+07 0.00324728 1.95158e+07 50.0504 0.0088012 0.986618 0 50.3159 GTEX-1S82Y-2026-SM-EVYCM 0 B1 6 pieces, squamous epithelium ~40-45 microns; moderate dermal fat 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 515 378 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989998 349383 0.97038 0.990706 0.783265 24198 1 76 0.00206332 206 0 8.44132e+07 0.0293706 341373 8.52052e+07 3.85372e+06 24234 4.2067e+07 0 0.187115 0.990706 0.775985 8.44132e+07 0.00303098 1.83776e+07 8.74991e+06 1.85506e+07 202 1.84997e+07 1.46037e+07 0.0025468 1.849e+07 49.9868 0.00400648 0.991413 0 50.2342 GTEX-1S82Y-2226-SM-EWRNV 0 B1 2 pieces, ~10% adherent/interstitial fat/tendon, rep delineated 6.6 Muscle Muscle - Skeletal 0011907 518 375 BP-81298 RNA Extraction from Paxgene-derived Lysate Plate Based 12/06/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.991079 397214 0.982824 0.993395 0.873127 21849 1 76 0.00211675 283 0 1.17379e+08 0.0168859 889759 1.18159e+08 7.63042e+06 21866 5.84619e+07 0 0.109696 0.993395 0.86736 1.17379e+08 0.00275171 2.50943e+07 1.19231e+07 2.53174e+07 313 2.5354e+07 2.55261e+07 0.00242606 2.52704e+07 49.9175 0.00753016 0.995711 0 50.2213 GTEX-1S82Y-2426-SM-E9U6N 0 B1 2 pieces, 89% occlusive atherosis, delineated 6 Blood Vessel Artery - Tibial 0007610 525 368 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.990751 213135 0.969858 0.991356 0.829343 21847 1 76 0.00179475 167 0 7.3423e+07 0.0297386 282496 7.40632e+07 2.9872e+06 21868 3.65946e+07 0 0.140515 0.991356 0.822174 7.3423e+07 0.00257892 1.57664e+07 8.20621e+06 1.58899e+07 176 1.58217e+07 1.44271e+07 0.00218659 1.58828e+07 50.0964 0.00381426 0.991961 0 50.195 GTEX-1S82Z-0003-SM-DE1J2 B1 Blood Whole Blood 0013756 -140 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S82Z-0003-SM-DJWXY B1 Blood Whole Blood 0013756 -140 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S82Z-0006-SM-DLHC5 B1 8.3 Blood Whole Blood 0013756 -140 BP-70324 RNA isolation_PAXgene Blood RNA (Manual) 12/28/2015 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.989591 1.52763e+06 0.943653 0.992426 0.807368 18923 1 76 0.00284885 168 0 9.79255e+07 0.0558667 540121 9.86728e+07 8.28272e+06 18935 4.86728e+07 0 0.136285 0.992426 0.801253 9.79255e+07 0.0032934 2.09077e+07 5.9706e+07 2.11666e+07 202 2.12443e+07 2.06231e+07 0.00307049 2.11135e+07 49.8457 0.00547386 0.995261 0 50.3077 GTEX-1S82Z-0626-SM-E9TIJ 1 B1 6 pieces, confirmed target muscularis; few ~1.5mm nubbins of adherent serosa, delineated 8.3 Esophagus Esophagus - Muscularis 0004648 153 445 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986801 420997 0.978554 0.988724 0.850782 21100 1 76 0.00184268 168 0 7.80752e+07 0.0211604 621319 7.89657e+07 3.23921e+06 21116 3.88622e+07 0 0.127772 0.988724 0.841188 7.80752e+07 0.0023335 1.68114e+07 6.0846e+06 1.69595e+07 202 1.69491e+07 1.43027e+07 0.00208761 1.69564e+07 50.0108 0.00786822 0.990646 0 50.2193 GTEX-1S82Z-0726-SM-E6CHX 1 B1 2 pieces, adipose elements, trace fibrous tissue 8.1 Breast Breast - Mammary Tissue 0008367 158 440 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993088 471043 0.979041 0.994369 0.839879 23123 1 76 0.00168932 285 0 1.11285e+08 0.0205937 375328 1.11915e+08 6.35223e+06 23151 5.54469e+07 0 0.139162 0.994369 0.83515 1.11285e+08 0.00231376 2.44237e+07 1.18473e+07 2.46608e+07 316 2.45994e+07 2.34045e+07 0.00200114 2.46079e+07 50.0086 0.00335368 0.995651 0 50.2416 GTEX-1S82Z-0826-SM-E6CHY 0 B1 6 pieces, squamous epithelium is ~40 microns; abundant dermal fat up to ~4.5mm 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 165 433 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99391 217719 0.973284 0.994795 0.797901 24291 1 76 0.00181409 318 0 1.03452e+08 0.0264404 314714 1.03993e+08 5.73201e+06 24335 5.15519e+07 0 0.175383 0.994795 0.793748 1.03452e+08 0.00225086 2.2385e+07 9.20582e+06 2.25579e+07 328 2.24177e+07 1.94863e+07 0.00203228 2.2607e+07 50.2103 0.00302629 0.995679 0 50.1923 GTEX-1S82Z-1726-SM-E6CHZ 1 B1 6 pieces, target mucosa well-preserved, ~25-30% thickness, excellent specimen 6.9 Stomach Stomach 0000945 208 390 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992919 219111 0.978431 0.994273 0.85069 21820 1 76 0.00174255 280 0 8.50243e+07 0.0212473 625491 8.5514e+07 5.40585e+06 21839 4.23468e+07 0 0.127741 0.994273 0.845818 8.50243e+07 0.00234021 1.85684e+07 6.56726e+06 1.87605e+07 261 1.86364e+07 1.53428e+07 0.00204098 1.87923e+07 50.2083 0.00731448 0.995626 0 50.2573 GTEX-1S82Z-1826-SM-E9TIK 1 B1 6 pieces, target lymphoid aggregates present, rep delineated; sample carefully, < 10% tissue 8.4 Small Intestine Small Intestine - Terminal Ileum 0001211 213 385 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987394 298294 0.98022 0.989261 0.863552 21746 1 76 0.0018114 155 0 6.56149e+07 0.019467 503221 6.63272e+07 2.51233e+06 21759 3.2666e+07 0 0.116668 0.989261 0.854279 6.56149e+07 0.0023975 1.43579e+07 4.82485e+06 1.44818e+07 168 1.44577e+07 1.22766e+07 0.0021039 1.44959e+07 50.066 0.00758695 0.991128 0 50.2148 GTEX-1S831-0002-SM-DE1J5 B1 Blood Whole Blood 0013756 -141 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S831-0002-SM-DJWYA B1 Blood Whole Blood 0013756 -141 BP-70323 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/28/2015 LCSET-10394 01/18/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S831-0006-SM-DLHC1 B1 9 Blood Whole Blood 0013756 -141 BP-70324 RNA isolation_PAXgene Blood RNA (Manual) 12/28/2015 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.989596 1.23607e+06 0.956795 0.992197 0.81618 19608 1 76 0.00267887 274 0 1.09759e+08 0.0427648 755048 1.10622e+08 9.28434e+06 19626 5.45857e+07 0 0.140615 0.992197 0.80981 1.09759e+08 0.0030009 2.40888e+07 6.2955e+07 2.42953e+07 272 2.44228e+07 2.38727e+07 0.00283946 2.42433e+07 49.8156 0.00682548 0.994797 0 50.2134 GTEX-1S831-0326-SM-EVYD3 1 B1 2 fragmented pieces; mature adipose tissue 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 141 811 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991818 464815 0.975691 0.992552 0.835459 22025 1 76 0.00196942 185 0 8.05393e+07 0.0239956 302854 8.11436e+07 3.64022e+06 22046 4.01402e+07 0 0.140231 0.992552 0.829237 8.05393e+07 0.00315489 1.76454e+07 8.27045e+06 1.7876e+07 200 1.78218e+07 1.54246e+07 0.00256172 1.77631e+07 49.9174 0.00373232 0.993286 0 50.3246 GTEX-1S831-0526-SM-EYYWO 1 B1 2 pieces; up to 1mm attached adventitia 7.8 Blood Vessel Artery - Tibial 0007610 143 809 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982376 219154 0.978978 0.985013 0.876691 20235 1 76 0.00202918 146 0 6.85093e+07 0.0206464 224318 6.95517e+07 2.52298e+06 20244 3.40626e+07 0 0.102287 0.985013 0.863553 6.85093e+07 0.0033354 1.4646e+07 4.85432e+06 1.48393e+07 163 1.47975e+07 1.49401e+07 0.00268054 1.48647e+07 50.1133 0.0032252 0.98765 0 50.3278 GTEX-1S831-0626-SM-EV79N 1 B1 2 pieces; well preserved parenchyma with Langerhans islets (rep outlined); accentuation of periductal connective tissue (rep arrows); mild to moderate autolysis of septal fat 7.7 Pancreas Pancreas 0001150 147 805 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.991007 410389 0.980116 0.992373 0.848072 23025 1 76 0.00254552 163 0 1.10622e+08 0.0195735 245688 1.11473e+08 1.22481e+07 23052 5.50958e+07 0 0.132044 0.992373 0.841603 1.10622e+08 0.0039795 2.53348e+07 2.2878e+07 2.55774e+07 190 2.5548e+07 3.20767e+07 0.00326152 2.55165e+07 49.9692 0.00220402 0.993738 0 50.2383 GTEX-1S831-0726-SM-EV79O 1 B1 2 pieces; congestion 6.8 Spleen Spleen 0002106 148 804 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.98894 218652 0.964381 0.989794 0.792523 23852 1 76 0.00293169 163 0 7.50138e+07 0.0347163 646895 7.57874e+07 8.61468e+06 23881 3.7346e+07 0 0.171858 0.989794 0.784434 7.50138e+07 0.00395661 1.64735e+07 9.28373e+06 1.66153e+07 178 1.65484e+07 1.12469e+07 0.00344371 1.66022e+07 50.0811 0.00853566 0.990647 0 50.2143 GTEX-1S831-0826-SM-E9TIS 1 B1 6 pieces; well trimmed target muscularis 8.9 Esophagus Esophagus - Muscularis 0004648 151 801 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.98917 499090 0.979265 0.990955 0.841619 22099 1 76 0.00204321 220 0 8.705e+07 0.0204342 491930 8.78446e+07 3.57547e+06 22123 4.33355e+07 0 0.137645 0.990955 0.834007 8.705e+07 0.00261359 1.89568e+07 6.99108e+06 1.91427e+07 228 1.91408e+07 1.65744e+07 0.00232788 1.91018e+07 49.9489 0.00560001 0.992739 0 50.244 GTEX-1S831-1026-SM-EVR5C 1 B1 6 pieces; target muscularis 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 160 792 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989803 245957 0.97575 0.991708 0.825026 23386 1 76 0.00221919 282 0 9.65827e+07 0.0239644 629969 9.73903e+07 7.30857e+06 23413 4.80797e+07 0 0.150724 0.991708 0.818185 9.65827e+07 0.00366267 2.09947e+07 7.9686e+06 2.12947e+07 285 2.12244e+07 1.73139e+07 0.00293954 2.12358e+07 50.0134 0.0064685 0.993613 0 50.3547 GTEX-1S831-1126-SM-EWROI 1 B1 6 pieces; full thickness gastric wall; preserved gastric mucosa and muscularis; mild to moderate autolysis of submucosa 7.9 Stomach Stomach 0000945 162 790 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98871 298210 0.977935 0.991448 0.835774 22788 1 76 0.00232848 214 0 8.76715e+07 0.0218113 517998 8.84278e+07 5.88257e+06 22810 4.36215e+07 0 0.142161 0.991448 0.828626 8.76715e+07 0.00324817 1.91378e+07 7.01752e+06 1.93917e+07 233 1.93699e+07 1.60989e+07 0.00277631 1.93723e+07 50.0031 0.00585787 0.994185 0 50.3295 GTEX-1S831-1226-SM-EVR5D 1 B1 2 pieces; glandular component and fibromuscular stroma; attached external fat with fibrovascular tissue and nerves (outlined) 6.9 Prostate Prostate 0002367 165 787 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987692 245000 0.970667 0.989847 0.797406 24496 1 76 0.00237351 161 0 7.50326e+07 0.0290719 394544 7.58023e+07 6.18621e+06 24521 3.73333e+07 0 0.173261 0.989847 0.78931 7.50326e+07 0.00384955 1.63609e+07 7.09784e+06 1.66017e+07 175 1.6554e+07 1.21735e+07 0.00310992 1.65573e+07 50.0049 0.00520491 0.992002 0 50.3652 GTEX-1S831-1726-SM-EWROJ 1 B1 6 pieces; target muscularis; small fragment of colonic mucosa (outlined) 8.4 Colon Colon - Sigmoid 0001159 184 768 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988537 313542 0.976598 0.991568 0.841086 22839 1 76 0.00233702 290 0 1.01867e+08 0.0230642 478552 1.02733e+08 7.22444e+06 22859 5.06757e+07 0 0.135512 0.991568 0.833994 1.01867e+08 0.00304838 2.20567e+07 8.85127e+06 2.23523e+07 311 2.23852e+07 1.97174e+07 0.0026833 2.22934e+07 49.8973 0.00465821 0.994599 0 50.3328 GTEX-1S831-1826-SM-EWROF 1 B1 6 pieces; hair bearing skin; small amounts of periadnexal adipose tissue 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 187 765 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.98323 195108 0.968951 0.986389 0.805563 21992 1 76 0.0025493 124 0 4.84252e+07 0.0308859 656161 4.90934e+07 3.57272e+06 22003 2.40816e+07 0 0.163388 0.986389 0.794599 4.84252e+07 0.00326034 1.05826e+07 6.88241e+06 1.0715e+07 114 1.07106e+07 7.89192e+06 0.00289536 1.07232e+07 50.0295 0.0133656 0.989548 0 50.311 GTEX-1S831-1926-SM-EV79P 1 B1 3 pieces; lobulated mature adipose tissue 8.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 189 763 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990363 225322 0.9765 0.9915 0.830742 22972 1 76 0.00239326 210 0 8.00406e+07 0.023218 584300 8.07267e+07 8.8464e+06 22996 3.98856e+07 0 0.145758 0.9915 0.82368 8.00406e+07 0.00375032 1.76214e+07 6.7101e+06 1.77629e+07 222 1.77314e+07 1.40664e+07 0.00307101 1.77388e+07 50.0104 0.007238 0.992637 0 50.1999 GTEX-1S831-2026-SM-EXOJP 1 B1 2 pieces; spermatogenesis present 6.8 Testis Testis 0000473 189 763 BP-78705 RNA Extraction from Paxgene-derived Lysate Plate Based 09/22/2016 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.989813 444103 0.938053 0.99174 0.747214 33565 1 76 0.00213522 213 0 9.66617e+07 0.0616433 933271 9.74668e+07 5.42356e+06 33639 4.81163e+07 0 0.190839 0.99174 0.741042 9.66617e+07 0.00340889 2.03893e+07 1.10131e+07 2.05156e+07 242 2.05448e+07 1.61275e+07 0.00277082 2.05195e+07 49.9693 0.00957527 0.993666 0 50.1545 GTEX-1S83E-0004-SM-DE1J1 B1 Blood Whole Blood 0013756 -44 BP-70330 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2015 LCSET-10232 12/16/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-1S83E-0004-SM-DJWXM B1 Blood Whole Blood 0013756 -44 BP-70330 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/30/2015 LCSET-10394 01/21/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-1S83E-0006-SM-DLHBW B1 8.3 Blood Whole Blood 0013756 -44 BP-70332 RNA isolation_PAXgene Blood RNA (Manual) 12/31/2015 LCSET-10317 01/24/2017 TruSeq.v1 RNASEQ 0.968746 986897 0.972284 0.971709 0.812217 19164 1 76 0.00262501 267 0 1.32585e+08 0.0265124 288021 1.36446e+08 1.17266e+07 19179 6.5814e+07 0 0.160066 0.971709 0.789239 1.32585e+08 0.00319417 3.07513e+07 1.77529e+08 3.09254e+07 290 3.10596e+07 3.58822e+07 0.00290872 3.10253e+07 49.9724 0.00211089 0.974673 0 50.1411 GTEX-1S83E-0126-SM-EWRO4 1 B1 6 pieces; ~10% mostly periadnexal fat; ~37 microns thick epidermis 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 447 859 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984585 220387 0.969332 0.988624 0.803097 22744 1 76 0.00231515 199 0 7.22874e+07 0.0304256 383705 7.31192e+07 4.80465e+06 22768 3.59189e+07 0 0.166235 0.988624 0.793961 7.22874e+07 0.003472 1.55554e+07 7.99388e+06 1.56952e+07 172 1.57437e+07 1.20886e+07 0.00287769 1.57684e+07 50.0393 0.00524766 0.992664 0 50.2237 GTEX-1S83E-0226-SM-EVYCW 1 B1 2 pieces; mature adipose tissue with 10% and 30% fibrovascular component; adnexa and hair bulb present (outlined); deep subcutaneous fat likely 8 Adipose Tissue Adipose - Subcutaneous 0002190 452 854 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991905 185734 0.974879 0.992214 0.832004 22520 1 76 0.00185891 167 0 7.15189e+07 0.024788 277781 7.20801e+07 3.30695e+06 22541 3.56521e+07 0 0.142875 0.992214 0.825526 7.15189e+07 0.00280829 1.5567e+07 5.95078e+06 1.57503e+07 174 1.5673e+07 1.38565e+07 0.00233345 1.56728e+07 49.9997 0.00385378 0.992522 0 50.2927 GTEX-1S83E-0326-SM-EVYCX 1 B1 2 pieces; nerve fascicles, prineurium and epineurium with attached rim of adipose tissue 8.1 Nerve Nerve - Tibial 0001323 454 852 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991318 366006 0.974055 0.991955 0.830718 22831 1 76 0.00185257 192 0 7.39039e+07 0.0255585 192936 7.45033e+07 3.38265e+06 22855 3.68212e+07 0 0.143337 0.991955 0.824035 7.39039e+07 0.00309241 1.62484e+07 5.49307e+06 1.64026e+07 181 1.63547e+07 1.44951e+07 0.00247209 1.63455e+07 49.986 0.00258963 0.992591 0 50.2361 GTEX-1S83E-0626-SM-E9TKC 1 B1 2 pieces;~15% glandular/ductal elements and 60% squamous epithelium and 25% submucosa 7.6 Salivary Gland Minor Salivary Gland 0006330 463 843 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.988162 470059 0.974052 0.989886 0.807906 24100 1 76 0.00223801 147 0 6.97925e+07 0.0250934 312370 7.05056e+07 2.90427e+06 24122 3.46974e+07 0 0.166146 0.989886 0.799735 6.97925e+07 0.0028 1.54507e+07 6.52875e+06 1.55321e+07 157 1.55746e+07 1.32638e+07 0.00251852 1.55195e+07 49.9114 0.00443043 0.99161 0 50.1315 GTEX-1S83E-0726-SM-EV7B6 1 B1 2 pieces; mild to moderate autolysis; a few small aggregates of lymphocytes (outlined); central area of empty spaces and blood vessels (arrows) 7.1 Thyroid Thyroid 0002046 466 840 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989907 416750 0.962113 0.991008 0.74948 26400 1 76 0.00265807 278 0 1.15844e+08 0.0368327 346489 1.16895e+08 1.2262e+07 26460 5.76699e+07 0 0.212633 0.991008 0.742741 1.15844e+08 0.00403234 2.52194e+07 1.53595e+07 2.53969e+07 302 2.53944e+07 1.97419e+07 0.00334444 2.53415e+07 49.9479 0.0029641 0.992109 0 50.1754 GTEX-1S83E-0826-SM-EV7B7 1 B1 6 pieces; 0.35mm thick stratified squamous epithelium; subtle surface desquamation; submucosal glands (outlined) 9.1 Esophagus Esophagus - Mucosa 0006920 480 826 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.989731 384100 0.977821 0.990755 0.833266 23236 1 76 0.00247066 286 0 1.11106e+08 0.0216986 464240 1.12143e+08 1.20462e+07 23253 5.53645e+07 0 0.144555 0.990755 0.825563 1.11106e+08 0.0037306 2.51034e+07 1.9165e+07 2.52928e+07 306 2.52765e+07 2.38065e+07 0.00309998 2.52288e+07 49.9528 0.00413972 0.99178 0 50.188 GTEX-1S83E-1026-SM-EWRO5 1 B1 6 pieces; target muscularis and two small fragments of squamous epithelium (outlined) 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 486 820 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988929 276024 0.97398 0.991853 0.832701 23788 1 76 0.00221852 282 0 1.02628e+08 0.0256913 513849 1.03471e+08 6.60561e+06 23816 5.10614e+07 0 0.141279 0.991853 0.825917 1.02628e+08 0.00307546 2.21043e+07 8.65691e+06 2.2377e+07 307 2.23918e+07 1.92658e+07 0.00263571 2.23492e+07 49.9523 0.0049661 0.994778 0 50.3066 GTEX-1S83E-1326-SM-E6CJM 1 B1 6 pieces; hair bearing skin and external fat up to 30% (outlined) 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 496 810 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992363 457503 0.972825 0.993683 0.782753 24619 1 76 0.00185973 403 0 1.12528e+08 0.0269173 370102 1.13243e+08 7.1762e+06 24660 5.60446e+07 0 0.190072 0.993683 0.777809 1.12528e+08 0.00261671 2.45436e+07 1.27447e+07 2.47125e+07 334 2.46482e+07 2.05744e+07 0.00223772 2.47416e+07 50.0945 0.00326821 0.995004 0 50.1715 GTEX-1S83E-1426-SM-EV7B8 1 B1 2 pieces; preserved parenchyma with Langerhans islets (rep outlined); moderate autolysis of septal fat 6.3 Pancreas Pancreas 0001150 498 808 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.990681 332953 0.978355 0.991877 0.838273 23292 1 76 0.0026456 203 0 1.20171e+08 0.0213075 261214 1.21155e+08 1.35912e+07 23322 5.98792e+07 0 0.140082 0.991877 0.831463 1.20171e+08 0.00397161 2.75234e+07 3.74921e+07 2.80029e+07 217 2.78938e+07 3.56497e+07 0.00330781 2.77706e+07 49.8894 0.00215602 0.993073 0 50.4318 GTEX-1S83E-1626-SM-EV7B9 1 B1 6 pieces; mild to moderate mucosal autolysis; muscularis preserved 6.6 Colon Colon - Transverse 0001157 511 795 BP-80217 RNA Extraction from Paxgene-derived Lysate Plate Based 11/04/2016 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988021 495859 0.971509 0.989638 0.80108 25069 1 76 0.00285583 380 0 1.11163e+08 0.0270801 1.82837e+06 1.12327e+08 1.24731e+07 25108 5.52748e+07 0 0.170429 0.989638 0.792779 1.11163e+08 0.00455145 2.46578e+07 1.58425e+07 2.48447e+07 336 2.48566e+07 1.62187e+07 0.00370225 2.48015e+07 49.9445 0.0162772 0.991254 0 50.1887 GTEX-1S83E-2126-SM-EWRO6 2 B1 2 fragmented pieces; well trimmed skeletal muscle 7 Muscle Muscle - Skeletal 0011907 572 734 BP-81344 RNA Extraction from Paxgene-derived Lysate Plate Based 12/07/2016 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.988668 404899 0.983578 0.99229 0.879739 21159 1 76 0.00214957 280 0 1.20788e+08 0.016176 1.2504e+06 1.21726e+08 8.65783e+06 21173 6.00826e+07 0 0.103839 0.99229 0.872956 1.20788e+08 0.00268752 2.62963e+07 1.38261e+07 2.65425e+07 315 2.66301e+07 2.5196e+07 0.00241127 2.6571e+07 49.9445 0.0102723 0.995913 0 50.233 GTEX-N7MS-0007-SM-26GME C1 8.2 Blood Whole Blood 0013756 BP-16653 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2011 Tech Dev EXCLUDE GTEX-N7MS-0007-SM-26GMV C1 8.2 Blood Whole Blood 0013756 BP-16653 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2011 Tech Dev EXCLUDE GTEX-N7MS-0007-SM-2D43E C1 8.2 Blood Whole Blood 0013756 BP-16653 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0007-SM-2D7W1 C1 8.2 Blood Whole Blood 0013756 BP-16653 RNA isolation_PAXgene Blood RNA (Manual) 05/17/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.874337 434676 0.956469 0.877069 0.736062 18188 1 101 0.00271258 78 0 6.34269e+07 0.0422561 175348 7.23169e+07 7.2943e+06 18197 3.14892e+07 0 0.220407 0.877069 0.645577 6.34269e+07 0.00466133 1.41967e+07 9.03198e+07 1.47802e+07 123 1.48106e+07 1.89837e+07 0.00368392 1.43616e+07 49.2305 0.00242472 0.879801 0 51.0068 GTEX-N7MS-0008-SM-4E3JI C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989146 955582 0.967279 0.992626 0.862472 20232 1 76 0.00229562 177 0 8.81464e+07 0.0324005 325050 8.88013e+07 9.80241e+06 20246 4.38124e+07 0 0.104807 0.992626 0.856112 8.81464e+07 0.00351591 1.94356e+07 2.33614e+07 1.96136e+07 191 1.97597e+07 2.21664e+07 0.00290363 1.95966e+07 49.7928 0.00366042 0.996105 0 50.2279 GTEX-N7MS-0009-SM-2BWY4 C1 Blood Whole Blood 0013756 BP-16657 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764057_R01C01 GTEX-N7MS-0009-SM-2XK1D C1 Blood Whole Blood 0013756 BP-16657 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R05C02 GTEX-N7MS-0009-SM-3USRT C1 Blood Whole Blood 0013756 BP-16657 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-N7MS-0009-SM-5JK3E C1 Blood Whole Blood 0013756 BP-16657 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/17/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-N7MS-0011-R10A-SM-2HMJK C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 1106 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.958315 284143 0.964442 0.966475 0.853071 24631 1 76 0.00294045 269 0 1.05495e+08 0.0350804 4.78668e+06 1.09154e+08 1.46137e+07 24650 5.21215e+07 0 0.111372 0.966475 0.824472 1.05495e+08 0.0091161 2.28568e+07 1.75289e+07 2.3324e+07 291 2.36532e+07 1.31357e+07 0.0060022 2.328e+07 49.6024 0.0438524 0.974635 0 50.5059 GTEX-N7MS-0011-R10A-SM-2IZJW C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 1106 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R11A-SM-2HMJS C1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 1106 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.959323 229907 0.95013 0.966496 0.769079 23964 1 76 0.00294235 271 0 1.00920e+08 0.0494613 1.28118e+06 1.04419e+08 1.41088e+07 23998 4.98972e+07 0 0.181051 0.966496 0.743311 1.00920e+08 0.00924474 2.15636e+07 1.34127e+07 2.18366e+07 287 2.21529e+07 1.31517e+07 0.00607016 2.19181e+07 49.7336 0.0122696 0.973669 0 50.3146 GTEX-N7MS-0011-R11A-SM-2IZJZ C1, A1 6.6 Brain Brain - Cerebellar Hemisphere 0002037 1106 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R1a-SM-2AXVJ C1, A1 7.3 Brain Brain - Hippocampus 0001954 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R1a-SM-2HMJG C1, A1 7.3 Brain Brain - Hippocampus 0001954 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.864616 204727 0.964379 0.87125 0.845731 23955 1 76 0.00289955 270 0 8.57691e+07 0.0352989 3.48072e+06 9.84437e+07 1.39312e+07 23972 4.24025e+07 0 0.118648 0.87125 0.736843 8.57691e+07 0.00957903 1.86256e+07 1.317e+07 1.89757e+07 284 1.91415e+07 9.44266e+06 0.00621386 1.90121e+07 49.8305 0.0353575 0.877884 0 50.4655 GTEX-N7MS-0011-R2a-SM-2HML6 C1, A1 7 Brain Brain - Substantia nigra 0002038 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.679 149220 0.963762 0.684089 0.844971 23507 1 76 0.00277276 141 0 6.38613e+07 0.0357955 2.24152e+06 9.33523e+07 1.44939e+07 23530 3.15377e+07 0 0.118791 0.684089 0.578035 6.38613e+07 0.00954666 1.39779e+07 8.16234e+06 1.42805e+07 147 1.44417e+07 9.2848e+06 0.00613451 1.42432e+07 49.6539 0.0240114 0.689178 0 50.5354 GTEX-N7MS-0011-R2a-SM-2IZK7 C1, A1 7 Brain Brain - Substantia nigra 0002038 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R3a-SM-2AXVU C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R3a-SM-2HMKD C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.135469 97774 0.958601 0.150591 0.824788 21723 1 76 0.00420181 96 0 3.95759e+07 0.0404541 875927 2.62804e+08 9.80309e+07 21731 1.76504e+07 0 0.133813 0.150591 0.124206 3.95759e+07 0.101499 7.7298e+06 8.01457e+06 7.89411e+06 112 9.61522e+06 5.61548e+06 0.0479654 9.49964e+06 49.6977 0.00333301 0.165713 0 50.5258 GTEX-N7MS-0011-R3a-SM-33HC6 C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.964166 712309 0.963467 0.966576 0.84401 26764 1 76 0.00231869 522 0 1.81379e+08 0.03596 5.29536e+06 1.87651e+08 1.66148e+07 26797 9.01229e+07 0 0.119457 0.966576 0.8158 1.81379e+08 0.0061153 3.95939e+07 2.44522e+07 4.02482e+07 491 4.02663e+07 2.41214e+07 0.00421226 3.99572e+07 49.8073 0.0282191 0.968987 0 50.4097 GTEX-N7MS-0011-R3a-SM-5SI8H C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.99233 630669 0.955815 0.994272 0.83255 24141 1 76 0.00208056 270 0 8.80166e+07 0.0435422 1.94219e+06 8.85237e+07 7.92713e+06 24164 4.3818e+07 0 0.123265 0.994272 0.827781 8.80166e+07 0.00307959 1.91702e+07 1.82872e+07 1.92468e+07 271 1.92566e+07 1.29129e+07 0.0025791 1.93255e+07 50.0893 0.0219398 0.996213 0 50.0997 GTEX-N7MS-0011-R4a-SM-2AXW2 C1, A1 6.2 Brain Brain - Amygdala 0001876 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R4a-SM-2HMKW C1, A1 6.2 Brain Brain - Amygdala 0001876 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.718481 125563 0.964373 0.72262 0.832063 23085 1 76 0.00285344 151 0 6.61032e+07 0.0352086 3.00479e+06 9.14772e+07 1.53189e+07 23104 3.25728e+07 0 0.132311 0.72262 0.601265 6.61032e+07 0.00951166 1.44269e+07 7.95801e+06 1.48587e+07 152 1.49273e+07 8.83325e+06 0.00616349 1.46901e+07 49.5996 0.0328474 0.726758 0 50.7374 GTEX-N7MS-0011-R5a-SM-2AXW7 C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R5a-SM-2HMK8 C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.969 295333 0.962563 0.976325 0.826528 25869 1 76 0.00288622 272 0 1.17758e+08 0.0370294 5.43649e+06 1.20613e+08 1.58678e+07 25897 5.82515e+07 0 0.136035 0.976325 0.806959 1.17758e+08 0.00899217 2.53868e+07 1.80867e+07 2.61437e+07 290 2.6441e+07 1.45238e+07 0.00591629 2.58417e+07 49.4269 0.0450737 0.983649 0 50.7345 GTEX-N7MS-0011-R6a-SM-2AXWD C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R6a-SM-2HMJ4 C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.957307 204787 0.962229 0.964269 0.835657 24864 1 76 0.00286871 270 0 9.48012e+07 0.0372727 3.60917e+06 9.8314e+07 1.21446e+07 24888 4.69029e+07 0 0.126572 0.964269 0.805799 9.48012e+07 0.00896637 2.04858e+07 1.1099e+07 2.09468e+07 286 2.12281e+07 1.32263e+07 0.00589553 2.08057e+07 49.4975 0.0367106 0.971231 0 50.5563 GTEX-N7MS-0011-R7a-SM-2AXV5 C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R7a-SM-2HMKN C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.737536 149171 0.965549 0.744275 0.843183 22487 1 76 0.00302325 128 0 5.949e+07 0.0341734 4.24037e+06 7.99302e+07 1.3235e+07 22499 2.93265e+07 0 0.122366 0.744275 0.62756 5.949e+07 0.00991789 1.26409e+07 1.09405e+07 1.34904e+07 144 1.35753e+07 5.83588e+06 0.00643936 1.29842e+07 48.8872 0.0530509 0.751014 0 51.6255 GTEX-N7MS-0011-R8a-SM-2AXVD C1, A1 6.8 Brain Brain - Hypothalamus 0001898 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0011-R8a-SM-2YUMK C1, A1 6.8 Brain Brain - Hypothalamus 0001898 1106 BP-17395 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.876246 318965 0.952348 0.877472 0.808358 23090 1 76 0.00228251 181 0 6.96863e+07 0.0472307 2.72468e+06 7.94171e+07 6.54978e+06 23115 3.45378e+07 0 0.143991 0.877472 0.709311 6.96863e+07 0.00364502 1.50253e+07 1.69538e+07 1.56599e+07 176 1.55563e+07 1.01882e+07 0.00296281 1.52204e+07 49.4543 0.0343084 0.878697 0 51.0341 GTEX-N7MS-0126-SM-3TW8O 3 C1 OK 9.1 Testis Testis 0000473 1076 1561 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.989365 1.18696e+06 0.889469 0.991106 0.665827 34815 1 76 0.00284377 223 0 1.07737e+08 0.110155 732748 1.08704e+08 1.45032e+07 34902 5.36492e+07 0 0.223641 0.991106 0.659905 1.07737e+08 0.00433769 2.12484e+07 5.34316e+07 2.14726e+07 242 2.15495e+07 1.61901e+07 0.00358942 2.13454e+07 49.762 0.00674075 0.992846 0 50.2624 GTEX-N7MS-0225-SM-4E3HO 1 C1 OK for analysis 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1180 1563 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.983234 572033 0.967182 0.986639 0.767181 25612 1 76 0.00267925 168 0 8.48963e+07 0.0325568 373401 8.60459e+07 9.23269e+06 25647 4.21711e+07 0 0.200002 0.986639 0.756931 8.48963e+07 0.00413881 1.86522e+07 1.11948e+07 1.87716e+07 181 1.88593e+07 1.44061e+07 0.00340651 1.88512e+07 49.9893 0.00433955 0.990045 0 50.1595 GTEX-N7MS-0326-SM-4E3K2 1 C1 OK for analysis 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 1183 1560 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986872 480656 0.96878 0.989859 0.774826 24088 1 76 0.00278414 168 0 8.07483e+07 0.0309598 373700 8.15756e+07 9.03549e+06 24124 4.01277e+07 0 0.193954 0.989859 0.766969 8.07483e+07 0.0041287 1.76461e+07 1.0886e+07 1.77523e+07 185 1.77985e+07 1.23451e+07 0.00345439 1.78395e+07 50.0575 0.00458103 0.992845 0 50.1501 GTEX-N7MS-0426-SM-2QU34 1 C1 OK for analysis 6.6 Muscle Muscle - Skeletal 0011907 1193 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-N7MS-0426-SM-2YUN6 1 C1 OK for analysis 6.6 Muscle Muscle - Skeletal 0011907 1193 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.815867 510837 0.959635 0.819071 0.824557 21166 1 76 0.00217179 151 0 7.85833e+07 0.0401386 1.07124e+06 9.59421e+07 8.3047e+06 21185 3.88739e+07 0 0.135079 0.819071 0.67537 7.85833e+07 0.00373368 1.66728e+07 2.2401e+07 1.72121e+07 171 1.73112e+07 1.49687e+07 0.00294968 1.68388e+07 49.3083 0.0111655 0.822274 0 50.7958 GTEX-N7MS-0526-SM-4E3JP 1 C1 OK for analysis 7.4 Nerve Nerve - Tibial 0001323 1203 1560 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.983599 593735 0.959016 0.987523 0.710658 25368 1 76 0.00286663 175 0 8.89097e+07 0.0407064 207854 9.0033e+07 1.06968e+07 25418 4.41463e+07 0 0.248358 0.987523 0.701792 8.89097e+07 0.00413213 1.9361e+07 1.23383e+07 1.94736e+07 186 1.95982e+07 1.25836e+07 0.00349687 1.95759e+07 49.9715 0.00230864 0.991448 0 50.1449 GTEX-N7MS-0626-SM-2QU2Q 1 C1 Medial calcif., OK for analysis 8.8 Blood Vessel Artery - Tibial 0007610 1206 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-N7MS-0626-SM-2YUN7 1 C1 Medial calcif., OK for analysis 8.8 Blood Vessel Artery - Tibial 0007610 1206 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.896448 183978 0.968087 0.899149 0.770546 23089 1 76 0.00230872 143 0 7.93339e+07 0.0314034 132220 8.82322e+07 7.55435e+06 23123 3.92647e+07 0 0.197541 0.899149 0.692835 7.93339e+07 0.00346777 1.69849e+07 8.24112e+06 1.73333e+07 163 1.74473e+07 1.49784e+07 0.0028865 1.70953e+07 49.4905 0.00149854 0.90185 0 50.5076 GTEX-N7MS-0826-SM-2AXU2 1 C1 Ok for analysis 8.5 Heart Heart - Left Ventricle 0006566 1229 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0826-SM-2HML4 1 C1 Ok for analysis 8.5 Heart Heart - Left Ventricle 0006566 1229 1560 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.869377 284005 0.977224 0.876199 0.832856 22865 1 76 0.00304865 197 0 8.95157e+07 0.0225724 4.98928e+06 1.02164e+08 1.50094e+07 22886 4.42136e+07 0 0.144368 0.876199 0.729747 8.95157e+07 0.00961497 1.94231e+07 1.58111e+07 2.00488e+07 231 2.03468e+07 1.29205e+07 0.00630625 1.972e+07 49.2178 0.0488362 0.883021 0 50.7925 GTEX-N7MS-0926-SM-2AXU3 2 C1 OK for analysis 8.7 Lung Lung 0008952 1232 1561 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-0926-SM-2HMIZ 2 C1 OK for analysis 8.7 Lung Lung 0008952 1232 1561 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.775177 133492 0.964723 0.781608 0.698629 23683 1 76 0.00310126 115 0 6.75791e+07 0.0349627 315593 8.64617e+07 1.32782e+07 23722 3.33406e+07 0 0.266094 0.781608 0.546054 6.75791e+07 0.00972553 1.46688e+07 8.20953e+06 1.4817e+07 126 1.50282e+07 9.02828e+06 0.00638614 1.49696e+07 49.9023 0.00365009 0.788039 0 50.2513 GTEX-N7MS-1126-SM-3LK5E 1 C1 OK for analysis 7.1 Esophagus Esophagus - Muscularis 0004648 1238 1441 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.885571 458772 0.963013 0.886329 0.809477 22523 1 76 0.00276335 197 0 7.92852e+07 0.036706 2.4379e+06 8.94535e+07 9.45168e+06 22551 3.93341e+07 0 0.153536 0.886329 0.717464 7.92852e+07 0.00400944 1.74051e+07 1.7045e+07 1.77137e+07 248 1.76529e+07 8.31044e+06 0.00338586 1.75345e+07 49.8319 0.0272533 0.887087 0 50.4393 GTEX-N7MS-1225-SM-3LK5G 1 C1 OK for analysis 7.1 Esophagus Esophagus - Mucosa 0006920 1239 1442 BP-16740 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.816589 362161 0.960752 0.817585 0.790242 22560 1 76 0.00277898 125 0 6.2335e+07 0.0390292 1.39174e+06 7.62429e+07 1.32485e+07 22582 3.09597e+07 0 0.170511 0.817585 0.64609 6.2335e+07 0.00413741 1.34971e+07 1.26067e+07 1.37285e+07 156 1.36962e+07 6.87216e+06 0.00345737 1.36096e+07 49.8415 0.018254 0.818581 0 50.425 GTEX-N7MS-1626-SM-3LK5F 2 C1 OK to analyze 6.8 Kidney Kidney - Cortex 0001225 1250 1442 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-2234 12/16/2012 TruSeq.v1 EXCLUDE 0.933063 439211 0.96528 0.93396 0.88508 22073 1 76 0.00258923 271 0 7.66902e+07 0.0344377 9.09218e+06 8.21129e+07 8.5787e+06 22086 3.80874e+07 0 0.0801995 0.93396 0.82663 7.66902e+07 0.00366993 1.70073e+07 1.80845e+07 1.73389e+07 259 1.7294e+07 1.10415e+07 0.00312906 1.71224e+07 49.7507 0.110728 0.934857 0 50.4828 GTEX-N7MS-2326-SM-2AXU4 1 C1 OK to analyze 8.5 Thyroid Thyroid 0002046 1269 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-2326-SM-2HMLD 1 C1 OK to analyze 8.5 Thyroid Thyroid 0002046 1269 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 RNASEQ 0.669704 181126 0.966245 0.679156 0.775505 25865 1 76 0.00344541 164 0 8.82448e+07 0.0334129 439375 1.29933e+08 3.18611e+07 25900 4.32628e+07 0 0.19074 0.679156 0.526689 8.82448e+07 0.0127516 1.89323e+07 1.32759e+07 1.91648e+07 166 1.96356e+07 1.43691e+07 0.00803375 1.96004e+07 49.9551 0.00338155 0.688609 0 50.305 GTEX-N7MS-2425-SM-26GMD 1 C1 OK to analyze 8.7 Brain Brain - Cortex 0001870 1285 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 Tech Dev EXCLUDE GTEX-N7MS-2425-SM-26GMU 1 C1 OK to analyze 8.7 Brain Brain - Cortex 0001870 1285 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 Tech Dev EXCLUDE GTEX-N7MS-2425-SM-2D43D 1 C1 OK to analyze 8.7 Brain Brain - Cortex 0001870 1285 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-2526-SM-26GMA 1 C1 OK to analyze 9.6 Brain Brain - Cerebellum 0002037 1286 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 Tech Dev EXCLUDE GTEX-N7MS-2526-SM-26GMR 1 C1 OK to analyze 9.6 Brain Brain - Cerebellum 0002037 1286 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 Tech Dev EXCLUDE GTEX-N7MS-2526-SM-2D43A 1 C1 OK to analyze 9.6 Brain Brain - Cerebellum 0002037 1286 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-N7MS-2526-SM-2D7W3 1 C1 OK to analyze 9.6 Brain Brain - Cerebellum 0002037 1286 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.817643 79908 0.952227 0.819653 0.70498 22018 1 101 0.00290695 87 0 4.7521e+07 0.0471779 576288 5.7977e+07 5.49261e+06 22029 2.35911e+07 0 0.247247 0.819653 0.577839 4.7521e+07 0.004763 1.0336e+07 4.39452e+06 1.03605e+07 124 1.04046e+07 8.02766e+06 0.0038327 1.03972e+07 49.9822 0.00993994 0.821662 0 50.0593 GTEX-N7MS-2625-SM-3LK77 1 C1 OK to analyze 7 Pituitary Pituitary 0000007 1287 1560 BP-16741 RNA isolation_PAXgene Tissue miRNA 05/19/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.746172 436015 0.952592 0.74788 0.773212 24269 1 76 0.00250439 109 0 5.12077e+07 0.0471144 237671 6.84705e+07 8.06046e+06 24291 2.53448e+07 0 0.179379 0.74788 0.57827 5.12077e+07 0.00468177 1.07114e+07 1.27397e+07 1.08486e+07 112 1.08794e+07 8.64796e+06 0.00359059 1.08005e+07 49.8178 0.00347114 0.749587 0 50.3182 GTEX-N7MT-0007-SM-3GACQ D1 7.9 Blood Whole Blood 0013756 BP-16697 RNA isolation_PAXgene Blood RNA (Manual) 05/18/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.883439 706042 0.959459 0.886751 0.791597 19643 1 76 0.0028348 114 0 7.58634e+07 0.0396778 172631 8.5552e+07 1.22277e+07 19657 3.75974e+07 0 0.167862 0.886751 0.701949 7.58634e+07 0.00970105 1.68142e+07 6.23092e+07 1.70752e+07 135 1.72178e+07 1.61099e+07 0.0062551 1.6959e+07 49.6213 0.00201785 0.890064 0 50.3851 GTEX-N7MT-0009-SM-2BWYA D1 Blood Whole Blood 0013756 BP-16702 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764057_R02C01 GTEX-N7MT-0009-SM-3UZEY D1 Blood Whole Blood 0013756 BP-16702 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2011 LCSET-2665,LCSET-2791 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-N7MT-0009-SM-5JK4X D1 Blood Whole Blood 0013756 BP-16702 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/18/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-N7MT-0011-R10A-SM-2I3E1 D1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 443 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.940862 237456 0.960056 0.945675 0.832284 23610 1 76 0.002544 268 0 7.68213e+07 0.0395689 4.73591e+06 8.12343e+07 8.3396e+06 23628 3.80716e+07 0 0.127772 0.945675 0.78707 7.68213e+07 0.00380184 1.66826e+07 1.52541e+07 1.69184e+07 268 1.69639e+07 8.85017e+06 0.00316972 1.69706e+07 50.01 0.0582994 0.950488 0 50.3509 GTEX-N7MT-0011-R10A-SM-2IZHQ D1, A1 6.8 Brain Brain - Frontal Cortex (BA9) 0009834 443 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R10a-SM-AHZ7Z D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 443 ChIP-Seq GTEX-N7MT-0011-R11A-SM-2I3DZ D1, A1 6.4 Brain Brain - Cerebellar Hemisphere 0002037 443 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.887851 186470 0.962707 0.890734 0.832184 23281 1 76 0.00234421 196 0 6.96127e+07 0.0369589 5.0998e+06 7.81521e+07 8.80288e+06 23295 3.4566e+07 0 0.130523 0.890734 0.741254 6.96127e+07 0.00362517 1.50782e+07 1.28867e+07 1.55166e+07 240 1.55183e+07 7.52954e+06 0.00298262 1.52533e+07 49.5693 0.0652549 0.893617 0 50.7163 GTEX-N7MT-0011-R11A-SM-2IZHP D1, A1 6.4 Brain Brain - Cerebellar Hemisphere 0002037 443 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R1a-SM-2AXWA D1, A1 7 Brain Brain - Hippocampus 0001954 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R1a-SM-2TC6G D1, A1 7 Brain Brain - Hippocampus 0001954 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 TruSeq.v1 EXCLUDE 0.15389 57824 0.931429 0.154777 0.776381 16525 1 76 0.00330443 87 0 6.18496e+06 0.0668317 292044 3.99605e+07 1.03118e+07 16528 2.99265e+06 0 0.155048 0.154777 0.120166 6.18496e+06 0.0200534 1.2896e+06 3.14434e+06 1.35252e+06 98 1.36471e+06 652104 0.0116309 1.31535e+06 49.0791 0.00730832 0.155664 0 51.1908 GTEX-N7MT-0011-R1a-SM-5SI7S D1, A1 7 Brain Brain - Hippocampus 0001954 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.991489 464653 0.958011 0.993775 0.825763 23343 1 76 0.00186305 269 0 7.67293e+07 0.0417245 4.23998e+06 7.721e+07 7.03671e+06 23369 3.81972e+07 0 0.132249 0.993775 0.820622 7.67293e+07 0.00299665 1.67158e+07 1.89097e+07 1.69009e+07 295 1.67391e+07 7.82719e+06 0.00242855 1.7045e+07 50.4528 0.0549149 0.996061 0 50.2754 GTEX-N7MT-0011-R1a-SM-CNPO1 D1, A1 7 Brain Brain - Hippocampus 0001954 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-9412 07/31/2016 TruSeq.v1 RNASEQ 0.985068 787496 0.95808 0.987911 0.814835 24957 1 76 0.00558032 272 0 1.03729e+08 0.0416582 6.77609e+06 1.04999e+08 2.70982e+07 24983 5.15741e+07 0 0.143245 0.987911 0.804985 1.03729e+08 0.00787081 2.22121e+07 3.61792e+07 2.29363e+07 323 2.28483e+07 1.07304e+07 0.00672227 2.25403e+07 49.6607 0.064535 0.990754 0 50.802 GTEX-N7MT-0011-R2a-SM-2AXW5 D1, A1 6.6 Brain Brain - Substantia nigra 0002038 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R2a-SM-2I3GI D1, A1 6.6 Brain Brain - Substantia nigra 0002038 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.793671 616417 0.920525 0.79553 0.764361 22029 1 76 0.00242559 131 0 5.4822e+07 0.0791786 2.63748e+06 6.89126e+07 7.98803e+06 22046 2.7237e+07 0 0.156164 0.79553 0.608072 5.4822e+07 0.00379477 1.14346e+07 2.96802e+07 1.1906e+07 133 1.18678e+07 6.32971e+06 0.00310858 1.15849e+07 49.3968 0.0382728 0.797388 0 51.0099 GTEX-N7MT-0011-R3a-SM-2AXVY D1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R3a-SM-2I3GC D1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.773435 1.47187e+06 0.892128 0.777905 0.728012 22941 1 76 0.00243493 139 0 6.46688e+07 0.107431 2.83832e+06 8.31321e+07 1.13892e+07 22957 3.1994e+07 0 0.164117 0.777905 0.566324 6.46688e+07 0.00406342 1.30388e+07 5.93496e+07 1.34727e+07 145 1.3527e+07 7.32652e+06 0.00324449 1.33006e+07 49.5781 0.0341423 0.782374 0 50.8183 GTEX-N7MT-0011-R4a-SM-2AXVR D1, A1 6.5 Brain Brain - Amygdala 0001876 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R4a-SM-2I3G9 D1, A1 6.5 Brain Brain - Amygdala 0001876 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.822842 434941 0.950821 0.826056 0.81394 22954 1 76 0.00231746 198 0 6.71466e+07 0.0488857 5.76645e+06 8.12857e+07 9.15814e+06 22975 3.3302e+07 0 0.136881 0.826056 0.67236 6.71466e+07 0.0038242 1.4147e+07 2.39826e+07 1.50632e+07 212 1.50268e+07 6.62762e+06 0.0030679 1.4388e+07 48.9143 0.0709405 0.82927 0 51.5684 GTEX-N7MT-0011-R5a-SM-2AXVM D1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R5a-SM-2I3G6 D1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 RNASEQ 0.754302 439579 0.953298 0.759572 0.803568 25717 1 76 0.00349055 268 0 9.65566e+07 0.0462987 4.20616e+06 1.2712e+08 4.31164e+07 25742 4.77788e+07 0 0.149731 0.759572 0.610368 9.65566e+07 0.010376 2.05454e+07 2.70554e+07 2.12384e+07 282 2.14578e+07 1.18556e+07 0.00690941 2.08969e+07 49.3379 0.0330882 0.764842 0 50.8292 GTEX-N7MT-0011-R6a-SM-2I3G3 D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.953479 191894 0.962366 0.956786 0.818453 24786 1 76 0.00249895 271 0 8.93118e+07 0.0372193 3.86049e+06 9.33457e+07 9.7677e+06 24810 4.43561e+07 0 0.143913 0.956786 0.783084 8.93118e+07 0.00362475 1.93574e+07 1.27108e+07 1.97631e+07 285 1.9803e+07 1.18402e+07 0.00305991 1.95816e+07 49.7189 0.041357 0.960092 0 50.5185 GTEX-N7MT-0011-R6a-SM-2IZIT D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R7a-SM-2AXV9 D1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R7a-SM-2I3FZ D1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.870853 1.48271e+06 0.910238 0.875565 0.758906 24134 1 76 0.00239986 268 0 8.48503e+07 0.0894022 4.56637e+06 9.69093e+07 1.17213e+07 24153 4.20376e+07 0 0.151332 0.875565 0.664471 8.48503e+07 0.00387107 1.71627e+07 6.62185e+07 1.79339e+07 272 1.79747e+07 8.53785e+06 0.0031315 1.74898e+07 49.3163 0.04712 0.880276 0 51.0987 GTEX-N7MT-0011-R8a-SM-2AXV2 D1, A1 5.3 Brain Brain - Hypothalamus 0001898 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0011-R8a-SM-2I5GU D1, A1 5.3 Brain Brain - Hypothalamus 0001898 443 BP-17394 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 RNASEQ 0.590433 1.70997e+06 0.902111 0.597342 0.75494 24804 1 76 0.00380988 208 0 9.25834e+07 0.0972037 7.05451e+06 1.54992e+08 4.90025e+07 24826 4.54066e+07 0 0.147171 0.597342 0.450957 9.25834e+07 0.0140704 1.8572e+07 8.22779e+07 1.94234e+07 215 1.96086e+07 8.29548e+06 0.00888079 1.92616e+07 49.5537 0.0455152 0.604251 0 51.1204 GTEX-N7MT-0126-SM-26GMB 1 D1 10x9 mm 9.1 Lung Lung 0008952 456 1665 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 Tech Dev EXCLUDE GTEX-N7MT-0126-SM-26GMS 1 D1 10x9 mm 9.1 Lung Lung 0008952 456 1665 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 Tech Dev EXCLUDE GTEX-N7MT-0126-SM-2D43B 1 D1 10x9 mm 9.1 Lung Lung 0008952 456 1665 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-0126-SM-2D7VT 1 D1 10x9 mm 9.1 Lung Lung 0008952 456 1665 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.872764 91574 0.968183 0.874832 0.695397 22847 1 101 0.00283568 107 0 4.51231e+07 0.0310842 100637 5.15791e+07 4.63473e+06 22864 2.24043e+07 0 0.272786 0.874832 0.608355 4.51231e+07 0.0042934 9.90416e+06 4.69837e+06 9.97928e+06 126 1.00142e+07 9.55551e+06 0.00356282 9.97036e+06 49.8904 0.00195112 0.876899 0 50.1889 GTEX-N7MT-0226-SM-48TC3 0 D1 7.4 Esophagus Esophagus - Muscularis 0004648 467 1654 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.985349 275020 0.96165 0.987248 0.729894 23009 1 76 0.00196268 116 0 5.81645e+07 0.0381138 489299 5.89158e+07 3.16161e+06 23037 2.89343e+07 0 0.231756 0.987248 0.720586 5.81645e+07 0.00275532 1.25971e+07 8.72106e+06 1.27094e+07 133 1.27279e+07 8.01887e+06 0.00235824 1.26916e+07 49.9286 0.00830505 0.989147 0 50.2219 GTEX-N7MT-0326-SM-48TDP 0 D1 9.9 Esophagus Esophagus - Mucosa 0006920 470 1651 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.987814 403317 0.961062 0.989723 0.745829 22160 1 76 0.00184796 117 0 5.51699e+07 0.038714 262699 5.57428e+07 2.76269e+06 22181 2.74533e+07 0 0.215233 0.989723 0.738164 5.51699e+07 0.00247389 1.21874e+07 1.09227e+07 1.22431e+07 123 1.22813e+07 8.78344e+06 0.00216032 1.22617e+07 49.96 0.0047127 0.991631 0 50.1141 GTEX-N7MT-0726-SM-3TW8S 0 D1 11x8 mm; atrophic endometrium, calcified arteries 5.5 Uterus Uterus 0000995 512 1609 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.986502 404209 0.957081 0.988606 0.669894 24889 1 76 0.00310544 168 0 8.95802e+07 0.0425989 391786 9.06126e+07 1.32466e+07 24950 4.44913e+07 0 0.287188 0.988606 0.662261 8.95802e+07 0.00469618 1.94574e+07 1.8046e+07 1.94844e+07 172 1.95461e+07 1.30817e+07 0.00389912 1.95827e+07 50.0468 0.00432375 0.99071 0 50.0346 GTEX-N7MT-0826-SM-EV794 0 D1 14x6 mm; partly sloughed; thin squamous surface; cyst 5.7 Cervix Uteri Cervix - Ectocervix 0012249 506 1615 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.978435 244816 0.961544 0.979278 0.660368 25053 1 76 0.00274546 150 0 8.18343e+07 0.0381391 443798 8.3566e+07 8.06458e+06 25115 4.07138e+07 0 0.301176 0.979278 0.646684 8.18343e+07 0.00390826 1.78334e+07 1.06999e+07 1.79898e+07 156 1.78964e+07 1.20797e+07 0.00332636 1.80068e+07 50.1538 0.00531075 0.980121 0 50.2183 GTEX-N7MT-1026-SM-3TW8T 0 D1 16x6 mm; anterior and poasterior 6 Pituitary Pituitary 0000007 539 1582 BP-16829 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.988469 812784 0.946559 0.990215 0.727839 26354 1 76 0.00273348 206 0 9.60372e+07 0.0531266 459742 9.69862e+07 1.20756e+07 26407 4.78135e+07 0 0.21872 0.990215 0.720717 9.60372e+07 0.00428834 2.02224e+07 2.89974e+07 2.03399e+07 240 2.03942e+07 1.48054e+07 0.00350954 2.03428e+07 49.937 0.00474028 0.99196 0 50.1449 GTEX-N7MT-1126-SM-2QU53 0 D1 1, 6.6x3.6 mm 7.2 Brain Brain - Cortex 0001870 536 1585 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-N7MT-1126-SM-2YUNQ 0 D1 1, 6.6x3.6 mm 7.2 Brain Brain - Cortex 0001870 536 1585 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.117451 105879 0.929929 0.114066 0.734742 18503 1 76 0.00240233 94 0 1.11381e+07 0.0677946 412997 9.7646e+07 1.25273e+07 18507 5.21907e+06 0 0.195187 0.114066 0.0838089 1.11381e+07 0.0110316 2.39809e+06 4.78662e+06 2.53003e+06 96 2.38263e+06 1.25907e+06 0.00684505 2.2467e+06 48.5318 0.00422953 0.11068 0 51.3387 GTEX-N7MT-1126-SM-5SI7V 0 D1 1, 6.6x3.6 mm 7.2 Brain Brain - Cortex 0001870 536 1585 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990347 594755 0.952993 0.993059 0.786783 23438 1 76 0.00195546 160 0 6.51233e+07 0.0467624 3.06185e+06 6.55785e+07 5.89255e+06 23452 3.23848e+07 0 0.16621 0.993059 0.781322 6.51233e+07 0.00330965 1.42268e+07 1.6704e+07 1.4238e+07 187 1.41115e+07 6.81936e+06 0.00263071 1.45378e+07 50.744 0.0466899 0.99577 0 50.0196 GTEX-N7MT-1126-SM-CYPQY 0 D1 1, 6.6x3.6 mm 7.2 Brain Brain - Cortex 0001870 536 1585 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.991907 1.06048e+06 0.956825 0.993463 0.787363 26748 1 76 0.00351336 377 0 1.45135e+08 0.0429155 7.31865e+06 1.4609e+08 1.36304e+07 26798 7.22635e+07 0 0.169462 0.993463 0.782216 1.45135e+08 0.0054782 3.16828e+07 2.8993e+07 3.21538e+07 406 3.19658e+07 1.5503e+07 0.00449424 3.20791e+07 50.0885 0.050097 0.995019 0 50.3689 GTEX-N7MT-1226-SM-26GMC 0 D1 1 piece 7.8x4 mm 9.5 Brain Brain - Cerebellum 0002037 538 1583 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 Tech Dev EXCLUDE GTEX-N7MT-1226-SM-26GMT 0 D1 1 piece 7.8x4 mm 9.5 Brain Brain - Cerebellum 0002037 538 1583 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 Tech Dev EXCLUDE GTEX-N7MT-1226-SM-2D7W4 0 D1 1 piece 7.8x4 mm 9.5 Brain Brain - Cerebellum 0002037 538 1583 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 EXCLUDE 0.97985 258407 0.937736 0.981906 0.65496 23330 1 101 0.00276723 101 0 5.95056e+07 0.0617912 1.18996e+06 6.06022e+07 4.42838e+06 23350 2.95946e+07 0 0.282776 0.981906 0.643109 5.95056e+07 0.0040631 1.27152e+07 1.08841e+07 1.28192e+07 161 1.28405e+07 7.98924e+06 0.00341381 1.28049e+07 49.9305 0.0196355 0.983962 0 50.2037 GTEX-N7MT-1226-SM-2TC6K 0 D1 1 piece 7.8x4 mm 9.5 Brain Brain - Cerebellum 0002037 538 1583 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-1477 05/27/2012 TruSeq.v1 EXCLUDE 0.697079 221392 0.937079 0.700614 0.673855 23714 1 76 0.00353949 86 0 5.82678e+07 0.0625504 1.12582e+06 8.31668e+07 2.4317e+07 23750 2.88267e+07 0 0.263225 0.700614 0.472112 5.82678e+07 0.0168451 1.24445e+07 1.25816e+07 1.25042e+07 99 1.25936e+07 6.1133e+06 0.0101587 1.26105e+07 50.0336 0.0135369 0.704149 0 50.1197 GTEX-N7MT-1226-SM-DKPOK 0 D1 1 piece 7.8x4 mm 9.5 Brain Brain - Cerebellum 0002037 538 1583 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.990452 931148 0.94253 0.992606 0.717245 25525 1 76 0.00297975 270 0 1.13826e+08 0.0571359 2.27849e+06 1.14674e+08 1.16309e+07 25576 5.66345e+07 0 0.225286 0.992606 0.711942 1.13826e+08 0.00321254 2.43701e+07 2.42881e+07 2.46961e+07 318 2.47812e+07 1.28546e+07 0.00309589 2.45183e+07 49.7333 0.0198693 0.99476 0 50.3322 GTEX-N7MT-1326-SM-2AXUA 0 D1 Fatty infiltration of myocardium; 1 piece 12x5 mm 7.9 Heart Heart - Left Ventricle 0006566 465 1656 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-N7MT-1326-SM-2I3FV 0 D1 Fatty infiltration of myocardium; 1 piece 12x5 mm 7.9 Heart Heart - Left Ventricle 0006566 465 1656 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.837473 324696 0.967192 0.841595 0.817775 19541 1 76 0.00216615 259 0 6.73735e+07 0.032754 4.42096e+06 8.00545e+07 8.84195e+06 19546 3.34017e+07 0 0.149417 0.841595 0.688235 6.73735e+07 0.00374209 1.39892e+07 3.14653e+07 1.53732e+07 257 1.53374e+07 2.7147e+06 0.00295026 1.42272e+07 48.1224 0.0552244 0.845716 0 52.3569 GTEX-N7MT-1426-SM-3LK5M 0 D1 3 pieces 8x1.5 mm; punctate medial calcification 8.9 Blood Vessel Artery - Aorta 0001496 469 1652 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.94595 496323 0.961946 0.946705 0.729988 23375 1 76 0.00265163 143 0 7.72939e+07 0.0377015 261486 8.16452e+07 7.96297e+06 23421 3.83651e+07 0 0.231958 0.946705 0.691083 7.72939e+07 0.00374474 1.66781e+07 1.55089e+07 1.67641e+07 161 1.67746e+07 1.24564e+07 0.00319775 1.67396e+07 49.9477 0.00320271 0.94746 0 50.1285 GTEX-N7MT-1626-SM-3LK71 1 D1 10x8 mm; good parenchymal preservation; autolysis of ducts; ~10% of aliquot is adipose 5.2 Pancreas Pancreas 0001150 475 1646 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.882757 535397 0.94319 0.884128 0.717226 24000 1 76 0.00271277 133 0 8.55389e+07 0.0564407 719952 9.67494e+07 1.02671e+07 24039 4.24613e+07 0 0.225964 0.884128 0.634119 8.55389e+07 0.00406092 1.85156e+07 2.6668e+07 1.889e+07 161 1.89007e+07 1.41929e+07 0.0033858 1.86418e+07 49.6551 0.00744141 0.885499 0 50.5005 GTEX-N7MT-1926-SM-3LK5N 0 D1 3 pieces, 9x4.8 mm; 9.5 Vagina Vagina 0000996 502 1619 BP-16831 RNA isolation_PAXgene Tissue miRNA 05/24/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.979779 552366 0.961694 0.980511 0.677995 24008 1 76 0.00260825 146 0 7.78581e+07 0.0380486 271083 7.94057e+07 7.98211e+06 24059 3.86342e+07 0 0.283699 0.980511 0.664781 7.78581e+07 0.00376343 1.71757e+07 1.735e+07 1.72872e+07 152 1.73301e+07 1.19279e+07 0.00318541 1.72038e+07 49.8171 0.0034139 0.981243 0 50.1618 GTEX-NFK9-0004-SM-2BWYG C1 Blood Whole Blood 0013756 183 BP-16974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/01/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764057_R03C01 GTEX-NFK9-0004-SM-2XK1E C1 Blood Whole Blood 0013756 183 BP-16974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/01/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R01C02 GTEX-NFK9-0004-SM-3UZFC C1 Blood Whole Blood 0013756 183 BP-16974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/01/2011 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-NFK9-0004-SM-5JK4Y C1 Blood Whole Blood 0013756 183 BP-16974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/01/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-NFK9-0006-SM-3GACS C1 7 Blood Whole Blood 0013756 183 BP-16997 RNA isolation_PAXgene Blood RNA (Manual) 06/02/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.927321 1.12728e+06 0.942842 0.930823 0.782829 17584 1 76 0.0024899 94 0 6.65832e+07 0.0558731 217471 7.15315e+07 1.07997e+07 17592 3.30611e+07 0 0.160013 0.930823 0.728675 6.65832e+07 0.00962377 1.4907e+07 1.10699e+08 1.5241e+07 122 1.52737e+07 1.64375e+07 0.00604342 1.51447e+07 49.7879 0.00304021 0.934325 0 50.554 GTEX-NFK9-0008-SM-4E3JE C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990456 847723 0.97082 0.992901 0.857805 20369 1 76 0.00236653 182 0 8.66264e+07 0.0288035 411390 8.72458e+07 9.58742e+06 20386 4.30923e+07 0 0.113015 0.992901 0.851715 8.66264e+07 0.0034327 1.92784e+07 1.87959e+07 1.93454e+07 182 1.94447e+07 2.17417e+07 0.00289831 1.93902e+07 49.9298 0.0047153 0.995346 0 50.0868 GTEX-NFK9-0126-SM-3LK5H 1 C1 Mild autolysis 8.7 Testis Testis 0000473 202 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.78515 438556 0.931792 0.784711 0.739546 32028 1 76 0.00255357 138 0 7.21338e+07 0.0677412 888913 9.1924e+07 1.04456e+07 32075 3.58368e+07 0 0.192246 0.784711 0.58033 7.21338e+07 0.00408002 1.51144e+07 1.71284e+07 1.53434e+07 149 1.53041e+07 1.1033e+07 0.00331722 1.51281e+07 49.7109 0.00967009 0.784273 0 50.376 GTEX-NFK9-0226-SM-2AXU5 0 C1 OK for anlysis 9.6 Skin Skin - Sun Exposed (Lower leg) 0004264 294 1569 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NFK9-0226-SM-2HMKQ 0 C1 OK for anlysis 9.6 Skin Skin - Sun Exposed (Lower leg) 0004264 294 1569 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.753353 152069 0.969408 0.759448 0.810404 23599 1 76 0.00290524 185 0 7.41993e+07 0.0303782 688938 9.77016e+07 1.44702e+07 23623 3.66403e+07 0 0.159004 0.759448 0.61546 7.41993e+07 0.00963538 1.58425e+07 9.91926e+06 1.61509e+07 157 1.63621e+07 1.24173e+07 0.0062433 1.61646e+07 49.6964 0.00705145 0.765544 0 50.4819 GTEX-NFK9-0326-SM-3MJGV 0 C1 OK for analysis 8.7 Adipose Tissue Adipose - Subcutaneous 0002190 296 1571 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.950758 671365 0.960367 0.954341 0.762438 24261 1 76 0.00300887 224 0 9.70915e+07 0.0392864 737556 1.01737e+08 1.689e+07 24297 4.81721e+07 0 0.197929 0.954341 0.727626 9.70915e+07 0.00568188 2.07515e+07 2.01195e+07 2.10781e+07 227 2.11831e+07 1.56054e+07 0.00434036 2.09886e+07 49.7694 0.00724966 0.957925 0 50.3905 GTEX-NFK9-0426-SM-2QU4B 0 C1 OK for analysis 9.5 Nerve Nerve - Tibial 0001323 318 1561 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NFK9-0426-SM-2YUNK 0 C1 OK for analysis 9.5 Nerve Nerve - Tibial 0001323 318 1561 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.808225 133351 0.965852 0.80885 0.754684 23619 1 76 0.00239111 171 0 7.02785e+07 0.0338288 354351 8.6887e+07 8.09902e+06 23662 3.46841e+07 0 0.211168 0.80885 0.610426 7.02785e+07 0.00375751 1.53979e+07 6.68157e+06 1.56048e+07 152 1.55966e+07 1.14643e+07 0.00307378 1.54586e+07 49.7779 0.0040783 0.809475 0 50.3338 GTEX-NFK9-0526-SM-2QU51 0 C1 OK for analysis 9.7 Blood Vessel Artery - Tibial 0007610 321 1561 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NFK9-0526-SM-2YUNL 0 C1 OK for analysis 9.7 Blood Vessel Artery - Tibial 0007610 321 1561 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.820349 98933 0.976446 0.820996 0.84088 20866 1 76 0.0022686 145 0 6.38286e+07 0.0230801 251618 7.77454e+07 9.68671e+06 20878 3.16551e+07 0 0.135566 0.820996 0.690359 6.38286e+07 0.00352499 1.37021e+07 5.1049e+06 1.39833e+07 143 1.39758e+07 1.29806e+07 0.0028963 1.37515e+07 49.5956 0.00323644 0.821642 0 50.5078 GTEX-NFK9-0626-SM-2AXU6 0 C1 OK for analysis 9.9 Muscle Muscle - Skeletal 0011907 330 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NFK9-0626-SM-2HMIV 0 C1 OK for analysis 9.9 Muscle Muscle - Skeletal 0011907 330 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.948104 201154 0.981239 0.95628 0.895029 20254 1 76 0.0027332 275 0 9.90611e+07 0.0185656 1.79984e+06 1.0359e+08 1.38895e+07 20264 4.89648e+07 0 0.0862103 0.95628 0.855899 9.90611e+07 0.00907308 2.14951e+07 1.37494e+07 2.1783e+07 292 2.21006e+07 1.97349e+07 0.00587604 2.19183e+07 49.7929 0.0173747 0.964457 0 50.3327 GTEX-NFK9-0726-SM-2AXU7 1 C1 OK for analysis 8.8 Thyroid Thyroid 0002046 345 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NFK9-0726-SM-2HMJW 1 C1 OK for analysis 8.8 Thyroid Thyroid 0002046 345 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.944545 273069 0.95875 0.951355 0.710802 25527 1 76 0.00308696 205 0 1.03052e+08 0.0409945 638888 1.08321e+08 1.51574e+07 25592 5.09718e+07 0 0.247948 0.951355 0.676225 1.03052e+08 0.00940645 2.20688e+07 1.57179e+07 2.24297e+07 229 2.27272e+07 1.34629e+07 0.00622409 2.24235e+07 49.6637 0.00589809 0.958164 0 50.4055 GTEX-NFK9-0926-SM-2AXU8 0 C1 minimal interstitial fibrosis 9.4 Heart Heart - Left Ventricle 0006566 351 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NFK9-0926-SM-2HMJU 0 C1 minimal interstitial fibrosis 9.4 Heart Heart - Left Ventricle 0006566 351 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.95526 263501 0.978009 0.96281 0.840306 21975 1 76 0.00324298 265 0 1.10178e+08 0.0218271 4.53624e+06 1.14434e+08 1.58776e+07 22000 5.45069e+07 0 0.137703 0.96281 0.809055 1.10178e+08 0.00970656 2.33913e+07 2.92054e+07 2.45476e+07 290 2.45862e+07 1.22423e+07 0.00644943 2.39206e+07 49.3139 0.0396407 0.97036 0 51.206 GTEX-NFK9-1026-SM-2AXU9 1 C1 mild congestion with atalectasis 7.6 Lung Lung 0008952 354 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NFK9-1026-SM-2HMK1 1 C1 mild congestion with atalectasis 7.6 Lung Lung 0008952 354 1560 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.907421 154036 0.967179 0.914411 0.742093 25826 1 76 0.00330031 163 0 9.44491e+07 0.0318897 516619 1.0329e+08 1.43585e+07 25876 4.66458e+07 0 0.225086 0.914411 0.678578 9.44491e+07 0.00989662 2.05994e+07 1.06307e+07 2.09346e+07 187 2.12083e+07 1.43023e+07 0.00657325 2.09877e+07 49.7387 0.00500166 0.9214 0 50.4035 GTEX-NFK9-1126-SM-3LK78 1 C1 OK for analysis 9 Esophagus Esophagus - Mucosa 0006920 356 1561 BP-16993 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.976643 1.43369e+06 0.925099 0.977584 0.758312 21887 1 76 0.00244363 122 0 5.99566e+07 0.0744754 383424 6.13314e+07 5.86514e+06 21899 2.9805e+07 0 0.166787 0.977584 0.741314 5.99566e+07 0.00364274 1.27765e+07 3.71963e+07 1.28422e+07 125 1.28439e+07 1.08173e+07 0.0030426 1.28882e+07 50.0861 0.00625167 0.978526 0 50.1281 GTEX-NFK9-1226-SM-3LK79 1 C1 OK for analysis 9.1 Esophagus Esophagus - Muscularis 0004648 359 1561 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.86029 562971 0.962146 0.860323 0.817456 22404 1 76 0.00240791 173 0 7.47807e+07 0.037531 693619 8.69218e+07 8.19976e+06 22421 3.71333e+07 0 0.14469 0.860323 0.703276 7.47807e+07 0.00390872 1.59044e+07 1.70712e+07 1.61292e+07 179 1.60856e+07 1.25312e+07 0.00315828 1.59624e+07 49.8079 0.00797981 0.860355 0 50.351 GTEX-NFK9-1326-SM-3LK5I 1 C1 OK for analysis 9.3 Blood Vessel Artery - Aorta 0001496 361 1561 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.983048 1.07145e+06 0.959334 0.983874 0.850922 21441 1 76 0.00223862 219 0 8.96631e+07 0.0402159 249655 9.11328e+07 8.11042e+06 21454 4.4582e+07 0 0.108412 0.983874 0.8372 8.96631e+07 0.0034095 1.90582e+07 2.64591e+07 1.91924e+07 221 1.91873e+07 1.89517e+07 0.00282357 1.91592e+07 49.9634 0.00273946 0.9847 0 50.1754 GTEX-NFK9-1426-SM-43ISG 2 C1 2. On the key sent with slides, specimen ID on key is listed as 1525; slide says 1425; barcode 215748 matches key and slide (spleen). 3. Also, the error is on the spreadsheet that is on the DVD. On 7/26/11, PRC determined that since morphologically the slides have the correct labels, PRC will use the slide labels as the correct identification. No further action pending. 8.7 Spleen Spleen 0002106 363 1561 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-3085 TruSeq.v1 RNASEQ 0.986788 352438 0.950699 0.988402 0.73469 23306 1 76 0.00255355 107 0 5.51039e+07 0.0480448 317754 5.57505e+07 2.85129e+06 23342 2.73963e+07 0 0.216009 0.988402 0.726169 5.51039e+07 0.00314709 1.19966e+07 1.40576e+07 1.20442e+07 119 1.20741e+07 7.7904e+06 0.00284984 1.20585e+07 49.9676 0.00569957 0.990016 0 50.0991 GTEX-NFK9-1526-SM-3LK7B 1 C1 Remarkably well preserved; single focus lymphocytic gastritis 9.5 Stomach Stomach 0000945 366 1560 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.962004 1.10732e+06 0.960222 0.963092 0.815758 23553 1 76 0.0024312 363 0 1.02313e+08 0.0394957 1.35491e+06 1.06234e+08 9.3217e+06 23581 5.08915e+07 0 0.144464 0.963092 0.78565 1.02313e+08 0.00370038 2.27075e+07 9.24121e+07 2.29393e+07 323 2.29343e+07 2.13505e+07 0.00306508 2.28546e+07 49.913 0.012754 0.96418 0 50.2539 GTEX-NFK9-1626-SM-3LK5J 1 C1 Remarkably well-preserved; good islets 6.9 Pancreas Pancreas 0001150 368 1560 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.905433 898468 0.958077 0.90595 0.806723 22263 1 76 0.00263851 110 0 8.50531e+07 0.0415608 321323 9.38828e+07 8.8815e+06 22287 4.22537e+07 0 0.151355 0.90595 0.73085 8.50531e+07 0.00399849 1.90935e+07 4.195e+07 1.9377e+07 133 1.93059e+07 2.28221e+07 0.00331811 1.92321e+07 49.9043 0.0034226 0.906466 0 50.3685 GTEX-NFK9-1726-SM-3TW8P 1 C1 All cortex, OK for analysis 9.6 Adrenal Gland Adrenal Gland 0002369 371 1560 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992871 988350 0.956586 0.994449 0.78027 24448 1 76 0.0029909 272 0 1.11723e+08 0.0431351 2.29621e+06 1.12347e+08 1.48352e+07 24496 5.56632e+07 0 0.176316 0.994449 0.775939 1.11723e+08 0.00439687 2.41396e+07 3.60911e+07 2.4238e+07 297 2.42867e+07 1.49099e+07 0.00369277 2.42579e+07 49.9704 0.0204387 0.996028 0 50.1017 GTEX-NFK9-2026-SM-3LK5K 1 C1 remarkably well preserved; minimal superficial autolysis 8.3 Colon Colon - Transverse 0001157 377 1560 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.962994 541323 0.965102 0.963799 0.804385 23950 1 76 0.00269879 274 0 9.00993e+07 0.0346719 2.47499e+06 9.34835e+07 8.22778e+06 23985 4.48044e+07 0 0.160717 0.963799 0.775266 9.00993e+07 0.00382692 1.96225e+07 2.12368e+07 1.97837e+07 307 1.97482e+07 1.05142e+07 0.00326238 1.97224e+07 49.9673 0.0264752 0.964605 0 50.2045 GTEX-NFK9-2226-SM-3MJGP 1 C1 Glands remarkably well-preserved 6 Prostate Prostate 0002367 382 1560 BP-16994 RNA isolation_PAXgene Tissue miRNA 06/02/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.963912 789044 0.961155 0.966658 0.814534 26011 1 76 0.00344409 377 0 1.42675e+08 0.0385396 3.00644e+06 1.47596e+08 2.38202e+07 26063 7.09133e+07 0 0.146621 0.966658 0.787376 1.42675e+08 0.00566686 3.05604e+07 3.84881e+07 3.20666e+07 337 3.20224e+07 1.65221e+07 0.00455232 3.09681e+07 49.1631 0.0203694 0.969403 0 51.2026 GTEX-NL3G-0007-SM-4SOIF C1 8.5 Blood Whole Blood 0013756 BP-17084 RNA isolation_PAXgene Blood RNA (Manual) 06/10/2011 LCSET-3995 09/19/2013 TruSeq.v1 EXCLUDE 0.983688 772956 0.956789 0.986439 0.757344 18138 1 76 0.00253812 98 0 6.34926e+07 0.0417875 194867 6.43655e+07 3.78873e+06 18144 3.15073e+07 0 0.199444 0.986439 0.747074 6.34926e+07 0.00331987 1.44175e+07 9.31717e+07 1.47675e+07 114 1.47929e+07 1.53483e+07 0.00292791 1.46049e+07 49.6802 0.00302751 0.989189 0 50.5997 GTEX-NL3G-0008-SM-4E3JX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.990934 861902 0.973442 0.993502 0.859739 20981 1 76 0.00226201 284 0 1.01976e+08 0.026248 262454 1.02643e+08 1.17211e+07 20995 5.07385e+07 0 0.113703 0.993502 0.854153 1.01976e+08 0.00314533 2.26193e+07 2.12028e+07 2.27342e+07 262 2.28556e+07 2.61227e+07 0.00270253 2.27599e+07 49.8951 0.00255697 0.99607 0 50.1267 GTEX-NL3G-0010-SM-4YUVQ C1 Blood Whole Blood 0013756 BP-17085 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/10/2011 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-NL3G-0010-SM-53ITK C1 Blood Whole Blood 0013756 BP-17085 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/10/2011 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-NL3G-0010-SM-7DRPG C1 Blood Whole Blood 0013756 BP-17085 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/10/2011 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-NL3G-0226-SM-4RGLU 1 C1 Artifactual holes 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 472 1574 BP-17209 RNA isolation_PAXgene Tissue miRNA 06/20/2011 LCSET-3879 09/26/2013 TruSeq.v1 EXCLUDE 0.989723 341299 0.97486 0.992051 0.75457 23207 1 76 0.00240355 164 0 7.77496e+07 0.0248072 437579 7.83726e+07 6.54668e+06 23243 3.86509e+07 0 0.220291 0.992051 0.748571 7.77496e+07 0.00314788 1.71284e+07 8.51067e+06 1.72783e+07 183 1.72933e+07 1.148e+07 0.00277484 1.7295e+07 50.0024 0.00558332 0.994378 0 50.2178 GTEX-NL3G-0526-SM-4RTWW 1 C1 Mild-moderate congestion 5.7 Lung Lung 0008952 528 1560 BP-17209 RNA isolation_PAXgene Tissue miRNA 06/20/2011 LCSET-3905 09/11/2013 TruSeq.v1 EXCLUDE 0.990988 276596 0.966268 0.992892 0.7427 23252 1 76 0.00236828 134 0 6.37543e+07 0.0335465 605415 6.42107e+07 3.41054e+06 23284 3.17073e+07 0 0.223568 0.992892 0.737421 6.37543e+07 0.00320591 1.38992e+07 6.98649e+06 1.41162e+07 157 1.40743e+07 7.54331e+06 0.00278629 1.40626e+07 49.9792 0.00942857 0.994796 0 50.3873 GTEX-NL3G-2526-SM-4SOIE 1 C1 Squamous mucosa ~2-3% of thickness 6.3 Vagina Vagina 0000996 583 1560 BP-17209 RNA isolation_PAXgene Tissue miRNA 06/20/2011 LCSET-3995 09/19/2013 TruSeq.v1 EXCLUDE 0.98461 486897 0.969627 0.986489 0.738473 23273 1 76 0.00240257 144 0 7.29856e+07 0.0301452 433018 7.39852e+07 3.76002e+06 23300 3.62962e+07 0 0.231155 0.986489 0.728495 7.29856e+07 0.0028518 1.62594e+07 1.03455e+07 1.63287e+07 163 1.63218e+07 1.08773e+07 0.00262676 1.6406e+07 50.1287 0.00585277 0.988368 0 50.1064 GTEX-NL3H-0006-SM-2AXUR C1 6.5 Blood Whole Blood 0013756 676 BP-17149 RNA isolation_PAXgene Blood RNA (Manual) 06/15/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0006-SM-2I3FW C1 6.5 Blood Whole Blood 0013756 676 BP-17149 RNA isolation_PAXgene Blood RNA (Manual) 06/15/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.739935 854344 0.948338 0.747837 0.777428 20274 1 76 0.00421944 106 0 8.94145e+07 0.0497797 1.10394e+06 1.19564e+08 5.26663e+07 20281 4.40489e+07 0 0.170909 0.747837 0.58139 8.94145e+07 0.0248289 1.95391e+07 1.45534e+08 2.04375e+07 121 2.07533e+07 2.03305e+07 0.0144153 2.01255e+07 49.2321 0.00923304 0.755739 0 51.1237 GTEX-NL3H-0008-SM-4E3HU C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990419 906937 0.969685 0.993281 0.856942 20778 1 76 0.00231796 215 0 9.33499e+07 0.0299969 288682 9.39813e+07 1.04768e+07 20791 4.64283e+07 0 0.112743 0.993281 0.851184 9.33499e+07 0.00331102 2.06354e+07 2.25435e+07 2.07925e+07 206 2.08982e+07 2.36762e+07 0.00281306 2.08004e+07 49.8828 0.0030717 0.996144 0 50.1896 GTEX-NL3H-0009-SM-2BWYN C1 Blood Whole Blood 0013756 BP-17146 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828067_R04C01 GTEX-NL3H-0009-SM-2XK1L C1 Blood Whole Blood 0013756 BP-17146 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R03C01 GTEX-NL3H-0009-SM-4X5ZJ C1 Blood Whole Blood 0013756 BP-17146 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-NL3H-0009-SM-5JK37 C1 Blood Whole Blood 0013756 BP-17146 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2011 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-NL3H-0011-R10A-SM-2I3E9 C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 680 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.969258 222893 0.961196 0.972039 0.842228 23564 1 76 0.002745 270 0 9.07177e+07 0.0381935 4.73447e+06 9.33272e+07 8.72e+06 23582 4.50859e+07 0 0.118968 0.972039 0.818678 9.07177e+07 0.0038942 1.97347e+07 1.25804e+07 2.01872e+07 286 2.02483e+07 1.26974e+07 0.00331796 1.99034e+07 49.5705 0.0507298 0.97482 0 50.5667 GTEX-NL3H-0011-R10A-SM-2IZHY C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 680 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R10A-SM-CYKWA C1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 680 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 RIP-Seq GTEX-NL3H-0011-R11A-SM-2I3E6 C1, A1 7 Brain Brain - Cerebellar Hemisphere 0002037 680 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.826954 322930 0.932667 0.828979 0.707589 22852 1 76 0.0028656 124 0 6.98197e+07 0.0669088 1.31627e+06 8.42237e+07 9.14254e+06 22889 3.46714e+07 0 0.225078 0.828979 0.586577 6.98197e+07 0.00454112 1.47697e+07 1.84961e+07 1.50655e+07 145 1.51224e+07 8.30817e+06 0.00370131 1.48646e+07 49.5702 0.0156283 0.831004 0 50.4958 GTEX-NL3H-0011-R11A-SM-2IZHV C1, A1 7 Brain Brain - Cerebellar Hemisphere 0002037 680 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R1a-SM-2AXV7 C1, A1 6.6 Brain Brain - Hippocampus 0001954 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R1a-SM-48TDJ C1, A1 6.7 Brain Brain - Hippocampus 0001954 680 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.988154 328373 0.964854 0.990765 0.866744 20784 1 76 0.00251028 196 0 6.39609e+07 0.0350034 1.03688e+07 6.45571e+07 3.44462e+06 20792 3.18312e+07 0 0.0981098 0.990765 0.85874 6.39609e+07 0.00321184 1.41591e+07 1.68402e+07 1.4408e+07 231 1.42239e+07 3.94542e+06 0.00286013 1.44777e+07 50.4422 0.160614 0.993375 0 50.4358 GTEX-NL3H-0011-R2a-SM-2AXWF C1, A1 6.3 Brain Brain - Substantia nigra 0002038 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R2a-SM-2I3GG C1, A1 6.3 Brain Brain - Substantia nigra 0002038 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.480119 342991 0.962898 0.486781 0.845447 22870 1 76 0.0043287 156 0 8.28114e+07 0.0368515 1.11069e+07 1.70121e+08 4.67802e+07 22879 4.0647e+07 0 0.117451 0.486781 0.411547 8.28114e+07 0.0282985 1.75654e+07 2.77429e+07 1.86773e+07 176 1.88817e+07 6.29374e+06 0.0161496 1.82525e+07 49.1528 0.0652883 0.493442 0 51.5341 GTEX-NL3H-0011-R3a-SM-2AXW9 C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R3a-SM-2I3GL C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.947494 611481 0.951676 0.950672 0.824284 23778 1 76 0.00276831 271 0 1.03137e+08 0.0479664 9.41637e+06 1.08488e+08 1.08237e+07 23794 5.12155e+07 0 0.127392 0.950672 0.783624 1.03137e+08 0.00397062 2.18038e+07 3.38412e+07 2.29529e+07 298 2.27977e+07 9.964e+06 0.00336746 2.22009e+07 49.3369 0.086796 0.95385 0 51.2837 GTEX-NL3H-0011-R4a-SM-2AXW4 C1, A1 7 Brain Brain - Amygdala 0001876 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R4a-SM-2I3GK C1, A1 7 Brain Brain - Amygdala 0001876 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.7032 594823 0.941443 0.706165 0.817057 20983 1 76 0.00294725 119 0 5.85091e+07 0.0583196 8.12937e+06 8.28547e+07 1.05827e+07 20996 2.89992e+07 0 0.124387 0.706165 0.576976 5.85091e+07 0.0047137 1.20014e+07 3.16107e+07 1.31694e+07 157 1.29976e+07 4.47577e+06 0.00382676 1.23272e+07 48.6763 0.0981159 0.709129 0 52.3203 GTEX-NL3H-0011-R5a-SM-2AXVW C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R5a-SM-2I3GB C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.869091 1.00415e+06 0.936353 0.871857 0.795834 22883 1 76 0.00290887 267 0 8.30776e+07 0.0633449 9.02443e+06 9.52881e+07 1.05017e+07 22898 4.12722e+07 0 0.140519 0.871857 0.693854 8.30776e+07 0.00429072 1.74093e+07 4.95964e+07 1.81508e+07 270 1.80458e+07 7.71522e+06 0.00359761 1.76998e+07 49.5159 0.0947068 0.874623 0 51.0426 GTEX-NL3H-0011-R6a-SM-2AXVQ C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R6a-SM-2I3G8 C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.946757 399583 0.952097 0.950039 0.808489 24068 1 76 0.00280015 268 0 9.21978e+07 0.0473868 6.08152e+06 9.70463e+07 1.04035e+07 24091 4.57868e+07 0 0.143608 0.950039 0.768097 9.21978e+07 0.00402774 1.96341e+07 2.20814e+07 2.04576e+07 283 2.04868e+07 1.14821e+07 0.00341182 1.98712e+07 49.2373 0.0626661 0.953322 0 51.0271 GTEX-NL3H-0011-R7a-SM-2AXVL C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R7a-SM-2I3G5 C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 RNASEQ 0.676555 305666 0.9686 0.682164 0.843318 21971 1 76 0.00393577 266 0 8.60075e+07 0.0311771 1.25901e+07 1.2608e+08 2.78615e+07 21983 4.2487e+07 0 0.125282 0.682164 0.575282 8.60075e+07 0.0110988 1.80569e+07 3.03022e+07 1.97105e+07 278 1.96243e+07 5.85956e+06 0.00748782 1.86111e+07 48.6751 0.0998573 0.687774 0 52.1892 GTEX-NL3H-0011-R8a-SM-2QU3M C1, A1 7.1 Brain Brain - Hypothalamus 0001898 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NL3H-0011-R8a-SM-2YUNH C1, A1 7.1 Brain Brain - Hypothalamus 0001898 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 TruSeq.v1 EXCLUDE 0.108203 92019 0.919413 0.103975 0.778858 15796 1 76 0.00276053 104 0 7.61224e+06 0.0790876 787935 7.32121e+07 1.01556e+07 15796 3.55462e+06 0 0.140554 0.103975 0.080982 7.61224e+06 0.0115215 1.62811e+06 4.8314e+06 1.78916e+06 95 1.64059e+06 680723 0.00731916 1.49299e+06 47.6449 0.0107624 0.0997472 0 52.3564 GTEX-NL3H-0011-R8a-SM-5S2VF C1, A1 7.1 Brain Brain - Hypothalamus 0001898 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.990451 450289 0.964716 0.993318 0.841724 22199 1 76 0.00254548 379 0 9.99674e+07 0.0350909 1.48773e+07 1.0064e+08 1.06146e+07 22210 4.97389e+07 0 0.122992 0.993318 0.8361 9.99674e+07 0.00363929 2.18365e+07 3.13635e+07 2.24772e+07 352 2.21114e+07 8.435e+06 0.00309081 2.24369e+07 50.3654 0.147827 0.996186 0 50.7229 GTEX-NL3H-0011-R8a-SM-DIPDY C1, A1 7.1 Brain Brain - Hypothalamus 0001898 680 BP-17413 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.990731 461931 0.966913 0.992149 0.851455 22240 1 76 0.00274858 379 0 1.01011e+08 0.0328844 1.6021e+07 1.01811e+08 7.22554e+06 22253 5.03344e+07 0 0.115458 0.992149 0.844769 1.01011e+08 0.00388616 2.2226e+07 2.2724e+07 2.29834e+07 378 2.25898e+07 9.33959e+06 0.00331656 2.2733e+07 50.158 0.15736 0.993566 0 50.8377 GTEX-NL4W-0006-SM-2I3GH D1 7 Blood Whole Blood 0013756 713 BP-17247 RNA isolation_PAXgene Blood RNA (Manual) 06/22/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.610201 217301 0.98456 0.618831 0.81786 17718 1 76 0.00387603 82 0 8.9781e+07 0.0122864 416646 1.45082e+08 5.4154e+07 17718 4.39976e+07 0 0.1667 0.618831 0.506117 8.9781e+07 0.0249929 2.06963e+07 1.853e+08 2.16842e+07 107 2.21552e+07 2.53398e+07 0.0142872 2.15034e+07 49.2535 0.0028718 0.627461 0 51.1654 GTEX-NL4W-0006-SM-2IZIU D1 7 Blood Whole Blood 0013756 713 BP-17247 RNA isolation_PAXgene Blood RNA (Manual) 06/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NL4W-0008-SM-4E3I2 D1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.99121 867048 0.971802 0.993566 0.885891 19968 1 76 0.00225463 283 0 1.03114e+08 0.0278588 299825 1.03782e+08 1.14828e+07 19978 5.13293e+07 0 0.0859104 0.993566 0.880191 1.03114e+08 0.00316746 2.28305e+07 2.51436e+07 2.29841e+07 274 2.3083e+07 2.788e+07 0.00270996 2.2975e+07 49.8827 0.002889 0.99592 0 50.1677 GTEX-NL4W-0009-SM-2BWZB D1 Blood Whole Blood 0013756 813 BP-17243 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764036_R04C01 GTEX-NL4W-0009-SM-2XK1I D1 Blood Whole Blood 0013756 813 BP-17243 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R03C01 GTEX-NL4W-0009-SM-3UZFE D1 Blood Whole Blood 0013756 813 BP-17243 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2011 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-NL4W-0009-SM-5JK3O D1 Blood Whole Blood 0013756 813 BP-17243 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-NL4W-0011-R10A-SM-2I3DY D1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 852 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.966791 197441 0.96858 0.973338 0.853982 23147 1 76 0.00274543 267 0 7.9023e+07 0.0310735 7.38337e+06 8.11876e+07 7.33566e+06 23159 3.91337e+07 0 0.114598 0.973338 0.831213 7.9023e+07 0.00378879 1.71338e+07 1.44272e+07 1.77372e+07 263 1.78015e+07 8.86472e+06 0.0032636 1.75103e+07 49.5877 0.090942 0.979884 0 50.8651 GTEX-NL4W-0011-R10A-SM-2IZHO D1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 852 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R10a-SM-AHZ7W D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 852 ChIP-Seq GTEX-NL4W-0011-R11A-SM-2I3DW D1, A1 5 Brain Brain - Cerebellar Hemisphere 0002037 852 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.906309 205043 0.948416 0.90855 0.77661 22944 1 76 0.00278979 270 0 8.17498e+07 0.0512857 2.20353e+06 8.99783e+07 1.02867e+07 22967 4.06179e+07 0 0.171806 0.90855 0.705589 8.17498e+07 0.00417429 1.75381e+07 1.27826e+07 1.78376e+07 260 1.78311e+07 8.88231e+06 0.00348033 1.77126e+07 49.8333 0.0244895 0.910791 0 50.4234 GTEX-NL4W-0011-R11A-SM-2IZHM D1, A1 5 Brain Brain - Cerebellar Hemisphere 0002037 852 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R1a-SM-2AXVC D1, A1 5.4 Brain Brain - Hippocampus 0001954 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R2a-SM-2AXV4 D1, A1 5.1 Brain Brain - Substantia nigra 0002038 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R2a-SM-2I5GV D1, A1 5.1 Brain Brain - Substantia nigra 0002038 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.619956 392696 0.955625 0.624074 0.827026 21505 1 76 0.00351505 105 0 5.99732e+07 0.0440723 6.5392e+06 9.60995e+07 2.15733e+07 21514 2.96182e+07 0 0.128599 0.624074 0.516125 5.99732e+07 0.0114828 1.28192e+07 2.59464e+07 1.33247e+07 138 1.3218e+07 4.7412e+06 0.00747264 1.31738e+07 49.9163 0.0680461 0.628191 0 50.9668 GTEX-NL4W-0011-R3a-SM-2AXWB D1, A1 5.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R4a-SM-2AXW6 D1, A1 5.9 Brain Brain - Amygdala 0001876 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R4a-SM-2I5GZ D1, A1 5.9 Brain Brain - Amygdala 0001876 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.933797 867336 0.943098 0.938846 0.822608 23901 1 76 0.00339438 269 0 1.00922e+08 0.0565583 1.18049e+07 1.07496e+08 2.26952e+07 23918 5.00425e+07 0 0.120491 0.938846 0.772302 1.00922e+08 0.0108021 2.16233e+07 5.07004e+07 2.19245e+07 302 2.18834e+07 9.73972e+06 0.00707831 2.20512e+07 50.191 0.109818 0.943895 0 50.3458 GTEX-NL4W-0011-R5a-SM-2AXVZ D1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R5a-SM-2I3GD D1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.878247 1.14294e+06 0.927243 0.882519 0.784219 23581 1 76 0.00278665 195 0 7.74302e+07 0.0724336 5.58325e+06 8.77377e+07 1.04839e+07 23599 3.83915e+07 0 0.143024 0.882519 0.692088 7.74302e+07 0.00430619 1.61025e+07 4.80712e+07 1.6639e+07 238 1.66356e+07 7.54412e+06 0.00354274 1.63998e+07 49.6431 0.0636357 0.886791 0 50.8194 GTEX-NL4W-0011-R6a-SM-2AXVS D1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R6a-SM-2I3GA D1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.927141 2.41094e+06 0.901271 0.93098 0.748287 24606 1 76 0.002792 268 0 1.07271e+08 0.0982887 8.55088e+06 1.15224e+08 1.21807e+07 24630 5.3231e+07 0 0.152984 0.93098 0.69664 1.07271e+08 0.00414477 2.15374e+07 1.00667e+08 2.24416e+07 290 2.24648e+07 1.00866e+07 0.0034656 2.18532e+07 49.31 0.0742111 0.934819 0 51.028 GTEX-NL4W-0011-R8a-SM-2AXVI D1, A1 6.5 Brain Brain - Hypothalamus 0001898 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R8a-SM-2I3G4 D1, A1 6.5 Brain Brain - Hypothalamus 0001898 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.916224 573277 0.948365 0.919498 0.823544 24094 1 76 0.00276752 269 0 8.35544e+07 0.0513141 5.70532e+06 9.08696e+07 9.51592e+06 24112 4.1502e+07 0 0.124821 0.919498 0.757246 8.35544e+07 0.00417836 1.791e+07 2.991e+07 1.85543e+07 281 1.85763e+07 9.25209e+06 0.00347043 1.81426e+07 49.4094 0.0627858 0.922771 0 50.8834 GTEX-NL4W-0011-R9a-SM-2AXVA D1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NL4W-0011-R9a-SM-2I3G1 D1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 852 BP-17409 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.92259 494585 0.949052 0.927018 0.827404 22645 1 76 0.00284046 284 0 8.51984e+07 0.0506941 7.59843e+06 9.19058e+07 9.95622e+06 22663 4.22629e+07 0 0.121648 0.927018 0.767018 8.51984e+07 0.00412403 1.84122e+07 2.85073e+07 1.90088e+07 290 1.89672e+07 8.90936e+06 0.00347918 1.87986e+07 49.7768 0.0826763 0.931446 0 50.7971 GTEX-NPJ7-0006-SM-3GACR D1 5.7 Blood Whole Blood 0013756 508 BP-17261 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.923738 338079 0.970004 0.928664 0.816054 20628 1 76 0.00308612 134 0 7.0012e+07 0.0290179 1.32222e+06 7.539e+07 1.1014e+07 20637 3.47028e+07 0 0.15395 0.928664 0.75784 7.0012e+07 0.0105013 1.52134e+07 3.11145e+07 1.55588e+07 143 1.56355e+07 1.35711e+07 0.00677406 1.55008e+07 49.7838 0.0175385 0.93359 0 50.5612 GTEX-NPJ7-0008-SM-4E3JS D1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990204 789024 0.970431 0.992977 0.865187 20515 1 76 0.00230632 179 0 8.45758e+07 0.0292324 424459 8.5174e+07 9.54446e+06 20527 4.207e+07 0 0.105244 0.992977 0.859111 8.45758e+07 0.0031855 1.86443e+07 1.96677e+07 1.87798e+07 186 1.88671e+07 2.11952e+07 0.00274468 1.87906e+07 49.8984 0.00498343 0.99575 0 50.181 GTEX-NPJ7-0009-SM-2BWYS D1 Blood Whole Blood 0013756 508 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764036_R01C01 GTEX-NPJ7-0009-SM-2XJZQ D1 Blood Whole Blood 0013756 508 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R01C01 GTEX-NPJ7-0009-SM-3USRM D1 Blood Whole Blood 0013756 508 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-NPJ7-0009-SM-5JK4M D1 Blood Whole Blood 0013756 508 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-NPJ7-0011-R10A-SM-2I3E5 D1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 650 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.895201 895955 0.922428 0.896915 0.776531 23973 1 76 0.00253733 199 0 7.83425e+07 0.0771117 3.41387e+06 8.73466e+07 9.36529e+06 23999 3.89712e+07 0 0.145898 0.896915 0.696482 7.83425e+07 0.00389096 1.62032e+07 4.45053e+07 1.68307e+07 230 1.67971e+07 9.16229e+06 0.00321285 1.63527e+07 49.3296 0.0390842 0.898629 0 50.9497 GTEX-NPJ7-0011-R10A-SM-2IZHU D1, A1 7.3 Brain Brain - Frontal Cortex (BA9) 0009834 650 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R10a-SM-AHZ7T D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 650 ChIP-Seq GTEX-NPJ7-0011-R11A-SM-2I3E8 D1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 650 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.944578 251618 0.947169 0.948147 0.740491 23951 1 76 0.00297273 268 0 9.59262e+07 0.0523579 2.486e+06 1.01172e+08 1.07486e+07 23984 4.75856e+07 0 0.206679 0.948147 0.702094 9.59262e+07 0.00427513 2.05737e+07 1.46044e+07 2.08887e+07 271 2.102e+07 1.16742e+07 0.00362148 2.07562e+07 49.6843 0.0245719 0.951717 0 50.3798 GTEX-NPJ7-0011-R11A-SM-2IZHX D1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 650 BP-19109 RNA isolation_PAXgene Tissue miRNA 09/28/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R1a-SM-3GACT D1, A1 6.7 Brain Brain - Hippocampus 0001954 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.873638 218697 0.967673 0.877299 0.855647 22911 1 76 0.00279712 168 0 7.41198e+07 0.0321261 6.56382e+06 8.44864e+07 1.99141e+07 22926 3.68216e+07 0 0.112026 0.877299 0.750658 7.41198e+07 0.00910432 1.62009e+07 1.41081e+07 1.67022e+07 210 1.66051e+07 6.17869e+06 0.00593756 1.65483e+07 49.9143 0.0776909 0.88096 0 50.7619 GTEX-NPJ7-0011-R2a-SM-2AXWC D1, A1 7 Brain Brain - Substantia nigra 0002038 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R2a-SM-2I3GF D1, A1 7 Brain Brain - Substantia nigra 0002038 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.857835 182482 0.962333 0.861568 0.832886 23051 1 76 0.00258138 221 0 7.53044e+07 0.0373163 3.98668e+06 8.7404e+07 9.94258e+06 23070 3.73418e+07 0 0.129447 0.861568 0.717587 7.53044e+07 0.0040036 1.64856e+07 1.03133e+07 1.69461e+07 238 1.69649e+07 1.03981e+07 0.00328941 1.67591e+07 49.6949 0.0456122 0.8653 0 50.6888 GTEX-NPJ7-0011-R4a-SM-2AXW1 D1, A1 6 Brain Brain - Amygdala 0001876 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R4a-SM-2I3GJ D1, A1 6 Brain Brain - Amygdala 0001876 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.951511 1.05915e+06 0.937196 0.954644 0.796353 23460 1 76 0.00278224 272 0 9.43169e+07 0.0625622 9.03396e+06 9.87981e+07 1.00704e+07 23481 4.68722e+07 0 0.140844 0.954644 0.760233 9.43169e+07 0.00423153 1.94483e+07 5.45043e+07 2.06546e+07 290 2.0526e+07 7.6842e+06 0.00350451 1.9789e+07 49.086 0.0914386 0.957776 0 51.504 GTEX-NPJ7-0011-R5a-SM-2AXVT D1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R5a-SM-2I5GY D1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 EXCLUDE 0.407925 788901 0.922791 0.425933 0.778282 22145 1 76 0.00413862 100 0 5.90253e+07 0.0766169 6.78506e+06 1.38579e+08 4.73797e+07 22155 2.80811e+07 0 0.144509 0.425933 0.331496 5.90253e+07 0.0629811 1.16074e+07 4.33802e+07 1.23956e+07 124 1.32135e+07 4.09309e+06 0.032316 1.28219e+07 49.2478 0.0489617 0.44394 0 51.6419 GTEX-NPJ7-0011-R5a-SM-33HBK D1, A1 5.9 Brain Brain - Caudate (basal ganglia) 0001873 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.830893 719623 0.964298 0.832735 0.842352 25127 1 76 0.00260786 375 0 1.56337e+08 0.0354789 1.79842e+07 1.8774e+08 1.75811e+07 25162 7.77223e+07 0 0.121946 0.832735 0.701456 1.56337e+08 0.00615254 3.41872e+07 4.16025e+07 3.50046e+07 401 3.46922e+07 1.34958e+07 0.00437628 3.47537e+07 50.0443 0.0957933 0.834576 0 50.5906 GTEX-NPJ7-0011-R6a-SM-2AXVN D1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R6a-SM-2I3G7 D1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.957295 591687 0.944861 0.959788 0.798226 24469 1 76 0.00276531 268 0 9.06149e+07 0.0547978 5.8294e+06 9.44113e+07 9.48214e+06 24498 4.50497e+07 0 0.146635 0.959788 0.766128 9.06149e+07 0.00405092 1.91021e+07 2.83182e+07 1.99716e+07 296 1.99072e+07 1.01323e+07 0.00340644 1.93529e+07 49.294 0.0617447 0.962282 0 51.1127 GTEX-NPJ7-0011-R7a-SM-EV79B D1, A1 5.6 Brain Brain - Putamen (basal ganglia) 0001874 650 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988753 509708 0.973282 0.99036 0.862305 22425 1 76 0.00283191 372 0 1.01633e+08 0.0265642 1.33832e+07 1.02622e+08 1.07683e+07 22438 5.06125e+07 0 0.110977 0.99036 0.853993 1.01633e+08 0.00449298 2.21539e+07 3.19993e+07 2.30284e+07 368 2.25813e+07 7.58872e+06 0.0036611 2.27116e+07 50.1439 0.130413 0.991967 0 50.9678 GTEX-NPJ7-0011-R8a-SM-2AXVB D1, A1 7.1 Brain Brain - Hypothalamus 0001898 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R8a-SM-2I3G2 D1, A1 7.1 Brain Brain - Hypothalamus 0001898 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.715874 157170 0.962083 0.716399 0.836509 23042 1 76 0.00269803 129 0 5.72236e+07 0.0374789 2.47666e+06 7.98767e+07 1.07373e+07 23058 2.82846e+07 0 0.125575 0.716399 0.599274 5.72236e+07 0.00435851 1.24927e+07 9.21418e+06 1.28654e+07 140 1.28396e+07 7.83731e+06 0.00352766 1.25499e+07 49.4295 0.031006 0.716923 0 50.735 GTEX-NPJ7-0011-R9a-SM-2AXV3 D1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-0011-R9a-SM-2TC5R D1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 650 BP-17410 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.262424 121567 0.939671 0.264752 0.795714 18616 1 76 0.00337621 115 0 1.59699e+07 0.0600372 672869 6.03204e+07 1.40241e+07 18620 7.81709e+06 0 0.143957 0.264752 0.210667 1.59699e+07 0.0189276 3.42363e+06 6.3458e+06 3.50784e+06 104 3.5443e+06 1.97475e+06 0.0110835 3.51306e+06 49.7787 0.0111549 0.267079 0 50.6074 GTEX-NPJ7-1326-SM-3MJHO 1 D1 One of 2 arteries is 2.5mm in diameter in 9 x 2.6mm fatty specimen 6.7 Blood Vessel Artery - Coronary 0001621 656 1625 BP-17313 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.985561 263320 0.972374 0.987781 0.803221 23572 1 76 0.00290953 281 0 1.02094e+08 0.0272707 485679 1.03357e+08 1.56848e+07 23612 5.07298e+07 0 0.169153 0.987781 0.793406 1.02094e+08 0.00506539 2.20256e+07 9.85973e+06 2.23163e+07 262 2.23523e+07 1.82053e+07 0.00398504 2.22088e+07 49.839 0.00469905 0.990002 0 50.3277 GTEX-NPJ7-1726-SM-2QU3I 1 D1 Nerve tissue is ~80% of specimen ; remainder fat ; (key says peripheral instead of tibial) 6.8 Nerve Nerve - Tibial 0001323 586 255 BP-17313 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ7-1726-SM-2YUNA 1 D1 Nerve tissue is ~80% of specimen ; remainder fat ; (key says peripheral instead of tibial) 6.8 Nerve Nerve - Tibial 0001323 586 255 BP-17313 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.710673 133728 0.969077 0.711136 0.770835 23502 1 76 0.00232409 169 0 7.15777e+07 0.0306238 283326 1.00653e+08 1.03938e+07 23539 3.53746e+07 0 0.198242 0.711136 0.548169 7.15777e+07 0.00423532 1.56903e+07 7.35387e+06 1.59919e+07 157 1.59853e+07 1.22885e+07 0.00327908 1.57417e+07 49.6161 0.00281489 0.7116 0 50.476 GTEX-NPJ7-2526-SM-EV79A 1 D1 Squamous mucosa is 1% total thickness of specimen 5.5 Vagina Vagina 0000996 623 1658 BP-17313 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983691 312111 0.970984 0.98519 0.754731 24552 1 76 0.00245841 186 0 8.62458e+07 0.0287622 314443 8.75423e+07 8.86127e+06 24593 4.29051e+07 0 0.216252 0.98519 0.743554 8.62458e+07 0.00460487 1.89368e+07 1.07008e+07 1.91189e+07 186 1.90397e+07 1.53442e+07 0.00353001 1.91516e+07 50.1465 0.0035919 0.986689 0 50.2393 GTEX-NPJ7-2726-SM-2AXTV 1 D1 OK for analysis 8.9 Brain Brain - Cortex 0001870 643 1638 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-2726-SM-2I3FT 1 D1 OK for analysis 8.9 Brain Brain - Cortex 0001870 643 1638 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.850454 303141 0.96005 0.853868 0.825463 23321 1 76 0.00277782 198 0 7.04746e+07 0.0396656 4.88193e+06 8.25357e+07 9.14518e+06 23335 3.49683e+07 0 0.134587 0.853868 0.704837 7.04746e+07 0.00434578 1.50369e+07 1.78893e+07 1.58475e+07 223 1.57867e+07 7.11514e+06 0.00355867 1.53167e+07 49.2444 0.0591493 0.857282 0 51.3124 GTEX-NPJ7-2826-SM-2AXTW 1 D1 OK for analysis 9.4 Brain Brain - Cerebellum 0002037 646 1635 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ7-2826-SM-2I3FU 1 D1 OK for analysis 9.4 Brain Brain - Cerebellum 0002037 646 1635 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.924326 297675 0.945704 0.931932 0.728741 24969 1 76 0.00281747 267 0 9.31478e+07 0.0539854 3.60402e+06 9.99513e+07 1.02901e+07 25015 4.60198e+07 0 0.216963 0.931932 0.679137 9.31478e+07 0.00417111 1.96636e+07 1.60191e+07 2.04127e+07 277 2.06377e+07 8.83999e+06 0.00348876 2.0097e+07 49.3363 0.0360578 0.939537 0 50.9345 GTEX-NPJ7-2926-SM-3MJGQ 1 D1 "Mild autolysis (""score 1"")" 7 Pituitary Pituitary 0000007 654 1627 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.963357 904590 0.952732 0.965258 0.762265 26571 1 76 0.00301236 279 0 1.21996e+08 0.0469308 580450 1.26387e+08 1.88691e+07 26623 6.06821e+07 0 0.190467 0.965258 0.735783 1.21996e+08 0.00490959 2.61421e+07 3.38916e+07 2.64658e+07 306 2.64906e+07 1.99491e+07 0.00395911 2.63579e+07 49.8745 0.00459266 0.96716 0 50.3077 GTEX-NPJ8-0004-SM-2BWYM D1 Blood Whole Blood 0013756 284 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764057_R04C01 GTEX-NPJ8-0004-SM-2XK1F D1 Blood Whole Blood 0013756 284 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R03C01 GTEX-NPJ8-0004-SM-3UZFD D1 Blood Whole Blood 0013756 284 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-NPJ8-0004-SM-5JK3D D1 Blood Whole Blood 0013756 284 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-NPJ8-0004-SM-CLTG5 D1 Blood Whole Blood 0013756 284 BP-17263 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/23/2011 LCSET-9400 07/27/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-NPJ8-0007-SM-26GMF D1 5.5 Blood Whole Blood 0013756 910 BP-17261 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2011 Tech Dev EXCLUDE GTEX-NPJ8-0007-SM-26GMW D1 5.5 Blood Whole Blood 0013756 910 BP-17261 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2011 Tech Dev EXCLUDE GTEX-NPJ8-0007-SM-2D43F D1 5.5 Blood Whole Blood 0013756 910 BP-17261 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0007-SM-2D7VX D1 5.5 Blood Whole Blood 0013756 910 BP-17261 RNA isolation_PAXgene Blood RNA (Manual) 06/23/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.8874 229370 0.983024 0.89106 0.837555 15684 1 101 0.00245661 88 0 7.78033e+07 0.0151037 469495 8.73154e+07 9.22723e+06 15684 3.85877e+07 0 0.145468 0.89106 0.746312 7.78033e+07 0.00469424 1.83066e+07 1.27899e+08 1.87757e+07 154 1.88433e+07 2.82022e+07 0.00357083 1.85589e+07 49.6198 0.005377 0.894721 0 50.6325 GTEX-NPJ8-0011-R10A-SM-2QU5B D1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 379 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R10A-SM-2YUMO D1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 379 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.787597 292754 0.951646 0.788924 0.811399 24101 1 76 0.00216539 201 0 7.38469e+07 0.0479135 2.97238e+06 9.36046e+07 8.18274e+06 24129 3.6578e+07 0 0.140247 0.788924 0.640132 7.38469e+07 0.0036629 1.5914e+07 1.49853e+07 1.62903e+07 215 1.63264e+07 1.01439e+07 0.00291288 1.59856e+07 49.4727 0.0317547 0.790252 0 50.5843 GTEX-NPJ8-0011-R10A-SM-DIQCU-PFC2_A1 D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 379 DroNc-seq GTEX-NPJ8-0011-R10A-SM-DIQCU-PFC2_A2 D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 379 DroNc-seq GTEX-NPJ8-0011-R10A-SM-DIQCU-PFC2_A3 D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 379 DroNc-seq GTEX-NPJ8-0011-R11A-SM-2QU5D D1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 379 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R11A-SM-2YUMS D1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 379 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.636569 238973 0.935478 0.637759 0.709311 22822 1 76 0.00255263 106 0 5.9594e+07 0.064064 1.19404e+06 9.34429e+07 9.88257e+06 22853 2.94017e+07 0 0.226167 0.637759 0.45237 5.9594e+07 0.00450698 1.26451e+07 1.32572e+07 1.28851e+07 125 1.29195e+07 7.31524e+06 0.00352798 1.27016e+07 49.5748 0.0127783 0.638949 0 50.47 GTEX-NPJ8-0011-R1a-SM-2AXVF D1, A1 6.6 Brain Brain - Hippocampus 0001954 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R1a-SM-2HMLC D1, A1 6.6 Brain Brain - Hippocampus 0001954 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.315209 148753 0.963417 0.32953 0.829542 21730 1 76 0.00371302 88 0 5.02749e+07 0.0362067 4.40101e+06 1.52565e+08 5.65491e+07 21736 2.39152e+07 0 0.133876 0.32953 0.273359 5.02749e+07 0.0635361 1.03965e+07 1.387e+07 1.09845e+07 104 1.17827e+07 4.28588e+06 0.0323247 1.1481e+07 49.3517 0.0288467 0.343851 0 51.3753 GTEX-NPJ8-0011-R1a-SM-33HCB D1, A1 6.6 Brain Brain - Hippocampus 0001954 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.897828 1.70183e+06 0.966708 0.90417 0.834881 25225 1 76 0.00235472 516 0 1.55604e+08 0.0330845 1.5076e+07 1.72095e+08 1.70186e+07 25269 7.67849e+07 0 0.131828 0.90417 0.754874 1.55604e+08 0.00693232 3.42038e+07 2.90513e+07 3.49186e+07 539 3.4723e+07 1.19149e+07 0.00462746 3.53252e+07 50.4299 0.0876022 0.910513 0 50.5171 GTEX-NPJ8-0011-R1a-SM-5SI8B D1, A1 6.6 Brain Brain - Hippocampus 0001954 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989676 563730 0.96151 0.9929 0.821627 23134 1 76 0.00217053 371 0 9.12952e+07 0.0382818 8.02966e+06 9.1948e+07 8.96497e+06 23152 4.54068e+07 0 0.139883 0.9929 0.815793 9.12952e+07 0.00338248 1.98842e+07 3.11091e+07 2.02437e+07 342 2.00815e+07 7.89992e+06 0.00277454 2.02903e+07 50.2586 0.0873283 0.996125 0 50.4479 GTEX-NPJ8-0011-R2a-SM-2AXV6 D1, A1 5.9 Brain Brain - Substantia nigra 0002038 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R2a-SM-2TC6M D1, A1 5.9 Brain Brain - Substantia nigra 0002038 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.704732 2.49399e+06 0.844504 0.709033 0.698545 21755 1 76 0.00317148 97 0 6.26619e+07 0.154808 5.44382e+06 8.83766e+07 1.75111e+07 21768 3.10029e+07 0 0.145959 0.709033 0.495291 6.26619e+07 0.0171228 1.19276e+07 1.06528e+08 1.24732e+07 119 1.24488e+07 4.64855e+06 0.0101048 1.22244e+07 49.5453 0.061598 0.713333 0 51.1178 GTEX-NPJ8-0011-R3a-SM-2AXWE D1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R3a-SM-2HMIW D1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 RNASEQ 0.71576 194432 0.963304 0.722915 0.812946 25356 1 76 0.00365592 206 0 9.65668e+07 0.0363511 4.91196e+06 1.3358e+08 3.58626e+07 25381 4.75694e+07 0 0.150358 0.722915 0.587691 9.65668e+07 0.0132194 2.08138e+07 1.4679e+07 2.16175e+07 233 2.18943e+07 1.26592e+07 0.00839032 2.13968e+07 49.4254 0.0367717 0.73007 0 50.9471 GTEX-NPJ8-0011-R4a-SM-2AXW8 D1, A1 6.5 Brain Brain - Amygdala 0001876 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R4a-SM-2HML3 D1, A1 6.5 Brain Brain - Amygdala 0001876 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.8019 209390 0.968103 0.807797 0.849579 22888 1 76 0.00275341 196 0 7.68748e+07 0.0316792 9.37806e+06 9.51659e+07 1.61759e+07 22902 3.79966e+07 0 0.118524 0.807797 0.686288 7.68748e+07 0.00938174 1.66907e+07 1.69888e+07 1.73938e+07 248 1.74181e+07 7.05472e+06 0.00604338 1.71064e+07 49.5485 0.0985442 0.813695 0 51.0313 GTEX-NPJ8-0011-R5a-SM-2AXW3 D1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R5a-SM-2HMJY D1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.814943 230457 0.964848 0.822149 0.823327 24521 1 76 0.0027142 198 0 8.19839e+07 0.0348286 6.96544e+06 9.9719e+07 1.49409e+07 24541 4.04458e+07 0 0.141521 0.822149 0.676898 8.19839e+07 0.00956665 1.76594e+07 1.41819e+07 1.83647e+07 231 1.85179e+07 9.59085e+06 0.00611039 1.81115e+07 49.4452 0.0698507 0.829356 0 50.979 GTEX-NPJ8-0011-R6a-SM-2AXVV D1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R6a-SM-2HMKB D1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.927144 264765 0.959174 0.937092 0.810565 25997 1 76 0.00268886 269 0 1.00897e+08 0.0404249 5.44869e+06 1.0767e+08 1.5166e+07 26027 4.9732e+07 0 0.148609 0.937092 0.759574 1.00897e+08 0.00916769 2.16436e+07 1.23916e+07 2.22079e+07 289 2.25488e+07 1.30395e+07 0.00589388 2.22402e+07 49.6555 0.0506056 0.947041 0 50.6434 GTEX-NPJ8-0011-R7a-SM-2AXVP D1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R7a-SM-2HMJV D1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.767113 188971 0.970023 0.773167 0.85497 22469 1 76 0.00281719 197 0 7.09825e+07 0.0297581 9.71465e+06 9.18075e+07 1.58202e+07 22479 3.5081e+07 0 0.115052 0.773167 0.661034 7.09825e+07 0.00928306 1.55675e+07 1.482e+07 1.59678e+07 213 1.60826e+07 6.67742e+06 0.00602482 1.58946e+07 49.7061 0.105815 0.77922 0 50.6345 GTEX-NPJ8-0011-R8a-SM-2AXVK D1, A1 7.9 Brain Brain - Hypothalamus 0001898 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R8a-SM-2HMLG D1, A1 7.9 Brain Brain - Hypothalamus 0001898 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.884171 192733 0.961098 0.889575 0.821409 25962 1 76 0.002258 271 0 1.06981e+08 0.0384701 2.96571e+06 1.20261e+08 1.67833e+07 26000 5.29651e+07 0 0.139688 0.889575 0.730705 1.06981e+08 0.0083756 2.32371e+07 1.11415e+07 2.35895e+07 284 2.37927e+07 1.49549e+07 0.00529822 2.3614e+07 49.8115 0.0246607 0.894979 0 50.3763 GTEX-NPJ8-0011-R9a-SM-2QU2O D1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-0011-R9a-SM-2YUN5 D1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 379 BP-17411 RNA isolation_PAXgene Tissue miRNA 07/05/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.670688 690864 0.926869 0.672803 0.772755 23265 1 76 0.00224937 164 0 6.58415e+07 0.0727578 3.04961e+06 9.78616e+07 1.03073e+07 23281 3.25027e+07 0 0.154114 0.672803 0.519912 6.58415e+07 0.00409155 1.38757e+07 3.30705e+07 1.45036e+07 158 1.44546e+07 8.95007e+06 0.00316757 1.41161e+07 49.4077 0.0311625 0.674918 0 51.1063 GTEX-NPJ8-0126-SM-2QU56 0 D1 Epidermis is 3% of total thickness of specimen. 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 311 1635 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-0126-SM-2YUNR 0 D1 Epidermis is 3% of total thickness of specimen. 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 311 1635 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.365977 86908 0.971001 0.365729 0.798776 20658 1 76 0.00234179 113 0 3.19739e+07 0.0287679 417735 8.74252e+07 1.08645e+07 20673 1.56957e+07 0 0.172224 0.365729 0.292136 3.19739e+07 0.00500619 6.98624e+06 4.32367e+06 7.12368e+06 105 7.09043e+06 5.55615e+06 0.00367489 6.99985e+06 49.6786 0.0047782 0.365481 0 50.487 GTEX-NPJ8-0226-SM-48TBN 1 D1 Central 95% of specimen drop-out probably due to poor fixation. Recommend re-fix/embed/cut (See Note below) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 314 1632 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-3085,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.990119 440869 0.970552 0.99173 0.795179 22293 1 76 0.00176732 167 0 7.78695e+07 0.0292211 513434 7.85189e+07 3.24706e+06 22316 3.87673e+07 0 0.175373 0.99173 0.788603 7.78695e+07 0.00238392 1.70141e+07 1.28215e+07 1.71294e+07 191 1.712e+07 1.36901e+07 0.00207512 1.71509e+07 50.0452 0.00653899 0.99334 0 50.1688 GTEX-NPJ8-0326-SM-26GMG 1 D1 Mild congestion 8.8 Lung Lung 0008952 320 1626 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-0326-SM-26GMX 1 D1 Mild congestion 8.8 Lung Lung 0008952 320 1626 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-0326-SM-2D43G 1 D1 Mild congestion 8.8 Lung Lung 0008952 320 1626 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0326-SM-2D7VV 1 D1 Mild congestion 8.8 Lung Lung 0008952 320 1626 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.793765 99460 0.96341 0.795411 0.697446 21798 1 101 0.00277441 101 0 3.75583e+07 0.0362499 370318 4.72187e+07 4.77671e+06 21807 1.86561e+07 0 0.265963 0.795411 0.554757 3.75583e+07 0.00467876 8.21915e+06 6.38123e+06 8.31312e+06 128 8.32596e+06 7.2876e+06 0.00372461 8.27939e+06 49.8598 0.00784262 0.797058 0 50.2842 GTEX-NPJ8-0426-SM-2AXU1 1 D1 minimal interstitial fibrosis 8.8 Heart Heart - Left Ventricle 0006566 325 1621 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-0426-SM-2HMK6 1 D1 minimal interstitial fibrosis 8.8 Heart Heart - Left Ventricle 0006566 325 1621 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.813722 147265 0.978772 0.820653 0.854455 21352 1 76 0.00268971 195 0 7.76206e+07 0.0210768 6.10222e+06 9.45839e+07 1.29511e+07 21363 3.83368e+07 0 0.124317 0.820653 0.701211 7.76206e+07 0.00951577 1.70493e+07 1.30938e+07 1.75715e+07 218 1.78183e+07 1.01913e+07 0.00607391 1.73542e+07 49.3403 0.0645165 0.827584 0 50.7542 GTEX-NPJ8-0526-SM-3MJHN 0 D1 Vessel wall is 78-90% of thickness of specimen 9.5 Blood Vessel Artery - Aorta 0001496 329 1617 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.96707 593158 0.964272 0.969877 0.78254 23232 1 76 0.00291223 173 0 8.93327e+07 0.0354058 198849 9.21072e+07 1.59894e+07 23266 4.43719e+07 0 0.181732 0.969877 0.758967 8.93327e+07 0.00536187 1.91357e+07 1.99201e+07 1.93986e+07 187 1.94482e+07 1.68743e+07 0.0041335 1.93373e+07 49.857 0.00215889 0.972685 0 50.3411 GTEX-NPJ8-0626-SM-48TBO 1 D1 Moderate congestion 8.2 Spleen Spleen 0002106 331 1615 BP-17314 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.982614 387193 0.95553 0.984533 0.742487 22983 1 76 0.00246867 129 0 6.71217e+07 0.0426457 737862 6.81762e+07 3.83276e+06 23011 3.33427e+07 0 0.213042 0.984533 0.731004 6.71217e+07 0.00329026 1.47634e+07 2.56951e+07 1.48716e+07 146 1.49183e+07 9.62701e+06 0.00287867 1.48513e+07 49.8875 0.0108229 0.986452 0 50.1826 GTEX-NPJ8-1226-SM-3MJHM 0 D1 Complete seminiferous tubular atrophy/hyalinization. 8.5 Testis Testis 0000473 359 1587 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 EXCLUDE 0.970084 723198 0.95492 0.97308 0.742585 27494 1 76 0.00290667 203 0 9.77085e+07 0.0448195 942887 1.00412e+08 1.56463e+07 27546 4.85359e+07 0 0.212334 0.97308 0.722595 9.77085e+07 0.00531389 2.10667e+07 2.52243e+07 2.13519e+07 206 2.14236e+07 1.6038e+07 0.00410657 2.12879e+07 49.8411 0.00939023 0.976077 0 50.3362 GTEX-NPJ8-1326-SM-2AXTY 1 D1 50% occlusive atherosclerosis, calcified; artery is ~75% of specimen. 7.1 Blood Vessel Artery - Coronary 0001621 365 1581 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-1326-SM-3LK6B 1 D1 50% occlusive atherosclerosis, calcified; artery is ~75% of specimen. 7.1 Blood Vessel Artery - Coronary 0001621 365 1581 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.951696 413352 0.96108 0.952326 0.740812 22880 1 76 0.00258311 150 0 7.34443e+07 0.0386293 680520 7.71209e+07 7.31586e+06 22911 3.6479e+07 0 0.220268 0.952326 0.705495 7.34443e+07 0.0036321 1.59933e+07 1.73879e+07 1.61391e+07 158 1.61445e+07 1.1781e+07 0.00310726 1.60482e+07 49.8504 0.00882406 0.952955 0 50.2269 GTEX-NPJ8-1426-SM-3MJHR 1 D1 Reasonably well-preserved 8 Pituitary Pituitary 0000007 379 1567 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987124 1.1277e+06 0.946475 0.98892 0.724829 27880 1 76 0.0028172 280 0 1.63886e+08 0.0532201 3.32073e+06 1.65722e+08 2.50737e+07 27959 8.15912e+07 0 0.221646 0.98892 0.716798 1.63886e+08 0.00441403 3.27444e+07 4.36315e+07 3.30177e+07 298 3.30604e+07 2.41457e+07 0.00361417 3.29699e+07 49.9315 0.0200379 0.990717 0 50.2078 GTEX-NPJ8-1526-SM-26GMH 0 D1 Well preserved 9.4 Brain Brain - Cortex 0001870 379 1567 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-1526-SM-26GMY 0 D1 Well preserved 9.4 Brain Brain - Cortex 0001870 379 1567 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-1526-SM-2D43H 0 D1 Well preserved 9.4 Brain Brain - Cortex 0001870 379 1567 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-1526-SM-2D7VU 0 D1 Well preserved 9.4 Brain Brain - Cortex 0001870 379 1567 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.776923 115351 0.958894 0.77846 0.78252 22535 1 101 0.0025323 96 0 4.42388e+07 0.0406228 1.82875e+06 5.68286e+07 5.94202e+06 22545 2.19769e+07 0 0.176374 0.77846 0.60916 4.42388e+07 0.00406919 9.65355e+06 5.55209e+06 9.82019e+06 137 9.81406e+06 7.57512e+06 0.00329923 9.73874e+06 49.8074 0.0321801 0.779996 0 50.4278 GTEX-NPJ8-1626-SM-2AXTZ 0 D1 ~85% muscle, 15% adipose centrally intermixed. 9.8 Muscle Muscle - Skeletal 0011907 308 1638 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-1626-SM-2HMIY 0 D1 ~85% muscle, 15% adipose centrally intermixed. 9.8 Muscle Muscle - Skeletal 0011907 308 1638 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.597162 99133 0.980754 0.605883 0.855498 21252 1 76 0.00343961 162 0 8.90229e+07 0.0189162 1.1626e+06 1.46931e+08 4.56717e+07 21265 4.3692e+07 0 0.125256 0.605883 0.518332 8.90229e+07 0.0261685 1.85753e+07 1.36684e+07 1.91386e+07 155 1.96608e+07 1.86314e+07 0.0146405 1.92e+07 49.4071 0.00791257 0.614604 0 50.7469 GTEX-NPJ8-1726-SM-2QU3J 0 D1 Nerve is 95% of specimen, rest intermingled adipose tissue 8.7 Nerve Nerve - Tibial 0001323 310 1636 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-1726-SM-2YUNB 0 D1 Nerve is 95% of specimen, rest intermingled adipose tissue 8.7 Nerve Nerve - Tibial 0001323 310 1636 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.691654 203335 0.968329 0.694224 0.756562 23540 1 76 0.002293 157 0 7.68745e+07 0.0313726 226410 1.10734e+08 1.18501e+07 23578 3.79384e+07 0 0.211766 0.694224 0.525224 7.68745e+07 0.00390488 1.67771e+07 9.9284e+06 1.70265e+07 160 1.713e+07 1.37289e+07 0.00309596 1.6952e+07 49.7388 0.00204462 0.696793 0 50.3689 GTEX-NPJ8-1826-SM-2QU3L 0 D1 Good clean specimen. 8.9 Blood Vessel Artery - Tibial 0007610 315 1631 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-NPJ8-1826-SM-2YUNC 0 D1 Good clean specimen. 8.9 Blood Vessel Artery - Tibial 0007610 315 1631 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.869579 157448 0.976106 0.871193 0.834959 20985 1 76 0.00214807 161 0 7.74225e+07 0.0235271 288713 8.88696e+07 7.6751e+06 21004 3.83718e+07 0 0.141146 0.871193 0.72741 7.74225e+07 0.0033229 1.68506e+07 8.81667e+06 1.70922e+07 172 1.71352e+07 1.64664e+07 0.0027344 1.69484e+07 49.7261 0.00324873 0.872806 0 50.3559 GTEX-NPJ8-1926-SM-3MJGB 0 D1 Epithelium is ~20% of total thickness. 9.2 Esophagus Esophagus - Mucosa 0006920 328 1618 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.94641 906630 0.961188 0.948191 0.751234 24126 1 76 0.00281962 212 0 1.01808e+08 0.0386028 821498 1.07371e+08 1.72161e+07 24161 5.05897e+07 0 0.209954 0.948191 0.712314 1.01808e+08 0.00508082 2.2429e+07 2.83637e+07 2.27045e+07 224 2.27252e+07 1.76664e+07 0.00394809 2.26141e+07 49.8775 0.00765101 0.949973 0 50.3053 GTEX-NPJ8-2026-SM-3TW91 0 D1 6 pieces, adequate for evaluation 7.5 Esophagus Esophagus - Muscularis 0004648 330 1616 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.99002 976729 0.947874 0.991865 0.740129 24713 1 76 0.00279101 276 0 1.14632e+08 0.051915 3.35330e+06 1.15572e+08 1.51743e+07 24760 5.70645e+07 0 0.207745 0.991865 0.734108 1.14632e+08 0.00435685 2.46965e+07 3.93076e+07 2.48529e+07 308 2.48403e+07 1.46016e+07 0.00357247 2.49221e+07 50.0822 0.0290148 0.993711 0 50.1579 GTEX-NPJ8-2126-SM-3MJGK 1 D1 reasonably good specimen, minimal saponification 8.7 Pancreas Pancreas 0001150 335 1611 BP-17315 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.970011 564655 0.952896 0.97278 0.734265 24471 1 76 0.00307641 167 0 1.0191e+08 0.0468783 1.08287e+06 1.04761e+08 1.59284e+07 24515 5.06416e+07 0 0.218631 0.97278 0.714278 1.0191e+08 0.0054384 2.23541e+07 2.75507e+07 2.28194e+07 192 2.28661e+07 1.78678e+07 0.00425405 2.25927e+07 49.6993 0.0103365 0.975548 0 50.515 GTEX-NPJ8-2226-SM-3TW8D 1 D1 Glomeruli appear healthy 7.2 Kidney Kidney - Cortex 0001225 342 1604 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.989226 455986 0.970557 0.9911 0.869023 22872 1 76 0.00290745 372 0 1.01577e+08 0.0293257 2.22452e+07 1.02489e+08 1.41435e+07 22885 5.05606e+07 0 0.101534 0.9911 0.861289 1.01577e+08 0.00451838 2.28259e+07 2.43034e+07 2.32851e+07 342 2.31552e+07 8.53015e+06 0.00371139 2.31155e+07 49.9571 0.21705 0.992973 0 50.4979 GTEX-NPJ8-2426-SM-3MJHL 2 D1 Glands poorly preserved 6.7 Prostate Prostate 0002367 356 1590 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.957379 455853 0.961428 0.961338 0.749808 25177 1 76 0.00298423 214 0 9.98568e+07 0.0383358 1.89926e+06 1.03873e+08 1.71329e+07 25226 4.95356e+07 0 0.21162 0.961338 0.720819 9.98568e+07 0.0055783 2.1529e+07 2.06842e+07 2.19225e+07 234 2.19917e+07 1.53754e+07 0.00427593 2.18586e+07 49.8482 0.0182845 0.965297 0 50.4528 GTEX-NPJ8-2526-SM-2AXTX 0 D1 2x1.3mm perithyroidal adipose tissue present on one pole or ~10% of specimen length. . 7.9 Thyroid Thyroid 0002046 362 1584 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-2526-SM-2HML8 0 D1 2x1.3mm perithyroidal adipose tissue present on one pole or ~10% of specimen length. . 7.9 Thyroid Thyroid 0002046 362 1584 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.564987 449954 0.951936 0.573263 0.756578 25056 1 76 0.00392248 131 0 8.58368e+07 0.0478155 2.25541e+06 1.49734e+08 5.10234e+07 25088 4.20482e+07 0 0.195358 0.573263 0.433719 8.58368e+07 0.0254541 1.81505e+07 3.02792e+07 1.84977e+07 140 1.90045e+07 1.26584e+07 0.0145328 1.87704e+07 49.6901 0.0150628 0.58154 0 50.4737 GTEX-NPJ8-2626-SM-26GMI 1 D1 Reasonably well-preserved 8.8 Brain Brain - Cerebellum 0002037 380 1566 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-2626-SM-26GMZ 1 D1 Reasonably well-preserved 8.8 Brain Brain - Cerebellum 0002037 380 1566 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 Tech Dev EXCLUDE GTEX-NPJ8-2626-SM-2D43I 1 D1 Reasonably well-preserved 8.8 Brain Brain - Cerebellum 0002037 380 1566 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-NPJ8-2626-SM-2D7W2 1 D1 Reasonably well-preserved 8.8 Brain Brain - Cerebellum 0002037 380 1566 BP-17316 RNA isolation_PAXgene Tissue miRNA 06/27/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.968443 126657 0.941268 0.971 0.662039 22804 1 101 0.00284891 102 0 5.65571e+07 0.058356 1.58399e+06 5.82463e+07 4.23956e+06 22824 2.81152e+07 0 0.279229 0.971 0.64284 5.65571e+07 0.00402368 1.21103e+07 7.06177e+06 1.22613e+07 154 1.22913e+07 7.38246e+06 0.00343475 1.2212e+07 49.8381 0.0271947 0.973558 0 50.3097 GTEX-O5YT-0007-SM-32PK7 B1 7.8 Blood Whole Blood 0013756 -47 BP-17470 RNA isolation_PAXgene Blood RNA (Manual) 07/08/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.843897 335426 0.972575 0.847467 0.857484 19103 1 76 0.00254431 146 0 8.81317e+07 0.027151 572094 1.03994e+08 1.97616e+07 19107 4.37468e+07 0 0.115091 0.847467 0.726689 8.81317e+07 0.00719707 1.93928e+07 2.89434e+07 1.9592e+07 180 1.96296e+07 1.90606e+07 0.00486089 1.97103e+07 50.1026 0.0055012 0.851036 0 50.2555 GTEX-O5YT-0008-SM-4E3IQ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 239 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990039 863009 0.974786 0.993104 0.868929 20519 1 76 0.00226062 282 0 1.07043e+08 0.0249322 253137 1.07787e+08 1.26011e+07 20531 5.32398e+07 0 0.105856 0.993104 0.862937 1.07043e+08 0.0032365 2.38463e+07 2.15731e+07 2.40716e+07 276 2.42406e+07 2.82559e+07 0.00274705 2.39994e+07 49.7499 0.0023485 0.996169 0 50.235 GTEX-O5YT-0010-SM-325AG B1 Blood Whole Blood 0013756 -47 BP-17475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/08/2011 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 6992696016_R02C01 GTEX-O5YT-0010-SM-325HV B1 Blood Whole Blood 0013756 -47 BP-17475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/08/2011 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R02C01 GTEX-O5YT-0010-SM-3UZF5 B1 Blood Whole Blood 0013756 -47 BP-17475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/08/2011 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-O5YT-0010-SM-5JK31 B1 Blood Whole Blood 0013756 -47 BP-17475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/08/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-O5YT-0126-SM-48TBW 0 B1 3 pieces; no lesions 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 242 1588 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.98775 201371 0.976244 0.989866 0.855101 21485 1 76 0.00169628 141 0 5.82596e+07 0.0235651 351030 5.88561e+07 3.06577e+06 21497 2.89907e+07 0 0.121143 0.989866 0.846436 5.82596e+07 0.00244172 1.2853e+07 6.69645e+06 1.29718e+07 148 1.29623e+07 1.12962e+07 0.0020682 1.29861e+07 50.0459 0.00596421 0.991981 0 50.2301 GTEX-O5YT-0226-SM-32PK5 0 B1 (80% centrally unfixed); 12x13.6mm aliquot: too large; Refixed: still has smaller central holes 6 Adipose Tissue Adipose - Subcutaneous 0002190 244 1586 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.668607 77515 0.972362 0.67325 0.785158 20310 1 76 0.00257786 125 0 3.83462e+07 0.027357 158187 5.69568e+07 6.74008e+06 20322 1.89498e+07 0 0.187204 0.67325 0.528608 3.83462e+07 0.00704806 8.40953e+06 4.41317e+06 8.43348e+06 128 8.51589e+06 6.28462e+06 0.00479754 8.57876e+06 50.1839 0.00277732 0.677893 0 50.0711 GTEX-O5YT-0326-SM-32PKA 0 B1 1 piece 13x8 mm 8 Heart Heart - Left Ventricle 0006566 139 251 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.962839 1.29205e+06 0.954735 0.966551 0.823179 21903 1 76 0.00231691 342 0 1.16928e+08 0.0449925 6.20742e+06 1.20975e+08 1.21142e+07 21926 5.80667e+07 0 0.131556 0.966551 0.795645 1.16928e+08 0.00698638 2.52385e+07 4.76403e+07 2.54514e+07 345 2.53526e+07 1.66716e+07 0.00464268 2.57609e+07 50.3994 0.0513118 0.970263 0 50.2099 GTEX-O5YT-0426-SM-3MJHD 0 B1 3 pieces 8.2 Blood Vessel Artery - Aorta 0001496 147 243 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.989384 318162 0.976665 0.991297 0.838273 23016 1 76 0.00268822 280 0 1.05039e+08 0.0229744 234304 1.05961e+08 1.56859e+07 23046 5.22538e+07 0 0.138392 0.991297 0.830978 1.05039e+08 0.0045702 2.28679e+07 9.54366e+06 2.31345e+07 317 2.31749e+07 2.07247e+07 0.00362739 2.30209e+07 49.8333 0.00221123 0.99321 0 50.2898 GTEX-O5YT-0526-SM-32PK8 1 B1 (large unfixed center) Extensive hemorrhage and pneumonia 6.9 Lung Lung 0008952 131 259 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.909039 172378 0.972299 0.912157 0.784257 24370 1 76 0.00239579 183 0 9.23695e+07 0.0274808 412580 1.01265e+08 1.13882e+07 24413 4.58724e+07 0 0.188042 0.912157 0.715366 9.23695e+07 0.0067882 2.04027e+07 7.98424e+06 2.05148e+07 221 2.04869e+07 1.37508e+07 0.00458449 2.07319e+07 50.2972 0.00407426 0.915276 0 50.1369 GTEX-O5YT-0726-SM-3MJHA 0 B1 3 pieces 8.5 Esophagus Esophagus - Muscularis 0004648 201 1629 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987899 331318 0.978255 0.99015 0.847834 23430 1 76 0.00265336 381 0 1.11845e+08 0.0214609 743821 1.12958e+08 1.72014e+07 23459 5.56248e+07 0 0.130421 0.99015 0.839483 1.11845e+08 0.00487082 2.4348e+07 1.09575e+07 2.47631e+07 337 2.47952e+07 2.10087e+07 0.00375957 2.45525e+07 49.7541 0.00658495 0.992402 0 50.4226 GTEX-O5YT-0826-SM-3TW8N 0 B1 Mild central hypoxia 7.4 Liver Liver 0001114 168 1662 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.990757 445437 0.967317 0.992356 0.815766 24986 1 76 0.00263264 283 0 1.22379e+08 0.0324432 5.78411e+06 1.23322e+08 1.6211e+07 25022 6.09829e+07 0 0.151551 0.992356 0.80953 1.22379e+08 0.00402209 2.70594e+07 2.39331e+07 2.73027e+07 305 2.73113e+07 2.38212e+07 0.00332625 2.72359e+07 49.9309 0.0469026 0.993955 0 50.2237 GTEX-O5YT-0926-SM-48TDG 0 B1 Mild congestion 7 Spleen Spleen 0002106 118 272 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990863 203815 0.969458 0.992258 0.821064 22287 1 76 0.00188039 130 0 5.84648e+07 0.0301041 278807 5.8921e+07 3.15126e+06 22301 2.91056e+07 0 0.148394 0.992258 0.814708 5.84648e+07 0.0026207 1.28716e+07 6.13964e+06 1.29439e+07 143 1.29436e+07 1.02443e+07 0.00225003 1.29518e+07 50.0157 0.00473188 0.993653 0 50.14 GTEX-O5YT-1026-SM-3MJGF 0 B1 large aliquot 20.5 x 12.8 6.7 Pancreas Pancreas 0001150 124 266 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.947543 206586 0.975256 0.952176 0.826284 23456 1 76 0.00286304 166 0 1.04431e+08 0.0245139 322177 1.09676e+08 1.86307e+07 23494 5.17745e+07 0 0.148971 0.952176 0.786768 1.04431e+08 0.00579636 2.34308e+07 1.99784e+07 2.4012e+07 182 2.41395e+07 2.60898e+07 0.00432257 2.38055e+07 49.6516 0.00293753 0.956808 0 50.6126 GTEX-O5YT-1326-SM-3MJGR 0 B1 3 pieces; cortex, well preserved 8 Adrenal Gland Adrenal Gland 0002369 112 278 BP-17532 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.961041 249734 0.979223 0.963764 0.848922 23497 1 76 0.00261778 274 0 1.14873e+08 0.0204184 934182 1.19192e+08 1.78358e+07 23528 5.71208e+07 0 0.130301 0.963764 0.818161 1.14873e+08 0.00510519 2.52934e+07 1.21585e+07 2.58484e+07 319 2.5937e+07 2.17315e+07 0.00385797 2.55033e+07 49.5785 0.00783764 0.966487 0 50.5426 GTEX-O5YT-1426-SM-3MJHC 1 B1 sloughed mucosa in 1 of 3 pieces 8.8 Colon Colon - Transverse 0001157 213 1617 BP-17533 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.985851 424475 0.97379 0.987867 0.822778 24829 1 76 0.00273034 289 0 1.06827e+08 0.0259104 1.12993e+06 1.08139e+08 1.63091e+07 24866 5.31458e+07 0 0.151012 0.987867 0.812796 1.06827e+08 0.00463731 2.34382e+07 1.31017e+07 2.3818e+07 316 2.3855e+07 2.10703e+07 0.00368188 2.36088e+07 49.7407 0.0104488 0.989884 0 50.4018 GTEX-O5YT-1626-SM-32PK6 0 B1 1 piece 14x8 mm 7.7 Muscle Muscle - Skeletal 0011907 248 1582 BP-17533 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.954091 132098 0.984176 0.956711 0.872298 20212 1 76 0.00221512 276 0 1.14477e+08 0.0155552 1.6361e+06 1.19657e+08 1.14358e+07 20221 5.6935e+07 0 0.111878 0.956711 0.834537 1.14477e+08 0.006412 2.44445e+07 1.09106e+07 2.45224e+07 318 2.44665e+07 2.10843e+07 0.00430781 2.47675e+07 50.3057 0.0136733 0.959331 0 50.0795 GTEX-O5YT-1726-SM-3NMD7 0 B1 2 pieces; no llesions 7 Nerve Nerve - Tibial 0001323 253 1577 BP-17533 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991099 326449 0.971575 0.993253 0.786367 24423 1 76 0.00278734 282 0 1.03222e+08 0.0281858 347452 1.03923e+08 1.27255e+07 24471 5.13809e+07 0 0.185208 0.993253 0.781062 1.03222e+08 0.00406522 2.27565e+07 1.23669e+07 2.27903e+07 315 2.28111e+07 1.74713e+07 0.0034249 2.29511e+07 50.153 0.00334337 0.995407 0 50.0371 GTEX-O5YT-1826-SM-32PK9 0 B1 2 pieces; no lesions 8.4 Blood Vessel Artery - Tibial 0007610 258 1572 BP-17533 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.977553 164830 0.978327 0.980916 0.84023 22372 1 76 0.00231397 220 0 1.04532e+08 0.0213055 265412 1.06566e+08 9.71092e+06 22400 5.19078e+07 0 0.138096 0.980916 0.824195 1.04532e+08 0.0070145 2.28085e+07 7.55777e+06 2.29252e+07 254 2.29323e+07 2.01386e+07 0.00465618 2.31444e+07 50.2302 0.00249058 0.984278 0 50.1276 GTEX-O5YT-2126-SM-3MJGD 1 B1 2 pieces 6.6 Testis Testis 0000473 222 1608 BP-17533 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.979324 330956 0.941715 0.981588 0.759613 33539 1 76 0.00281831 277 0 1.10143e+08 0.0580026 2.06524e+06 1.12209e+08 1.67626e+07 33615 5.47609e+07 0 0.182103 0.981588 0.745627 1.10143e+08 0.00503757 2.33607e+07 1.46705e+07 2.37646e+07 315 2.38111e+07 1.68101e+07 0.00392538 2.35399e+07 49.7136 0.0184053 0.983853 0 50.4286 GTEX-O5YU-0004-SM-53IT8 C1 Blood Whole Blood 0013756 421 BP-17487 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2011 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-O5YU-0008-SM-4E3I7 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989733 815508 0.9769 0.992877 0.865734 20744 1 76 0.00228416 284 0 1.03252e+08 0.0228275 201907 1.03993e+08 1.15114e+07 20760 5.13463e+07 0 0.111166 0.992877 0.859567 1.03252e+08 0.00335497 2.30818e+07 1.73344e+07 2.31664e+07 269 2.33291e+07 2.64153e+07 0.00281787 2.32409e+07 49.9054 0.00194154 0.996022 0 50.0914 GTEX-O5YU-0726-SM-EV792 0 C1 eccentric plaque, wide lumen 5.7 Blood Vessel Artery - Coronary 0001621 533 1564 BP-17534 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.981596 204081 0.9748 0.982731 0.793324 22671 1 76 0.00279878 128 0 5.84216e+07 0.0247149 288142 5.94482e+07 6.45895e+06 22690 2.90705e+07 0 0.181476 0.982731 0.779624 5.84216e+07 0.00450546 1.27677e+07 6.36446e+06 1.28664e+07 133 1.28152e+07 1.00597e+07 0.00365113 1.28862e+07 50.1381 0.00484694 0.983866 0 50.1925 GTEX-O5YV-0004-SM-2BWZ5 C1 Blood Whole Blood 0013756 151 BP-17499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764036_R03C01 GTEX-O5YV-0004-SM-2XJZR C1 Blood Whole Blood 0013756 151 BP-17499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R03C02 GTEX-O5YV-0004-SM-4X5ZE C1 Blood Whole Blood 0013756 151 BP-17499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-O5YV-0004-SM-5JK2N C1 Blood Whole Blood 0013756 151 BP-17499 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-O5YV-0006-SM-2AXVG C1 8.7 Blood Whole Blood 0013756 BP-17518 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-O5YV-0006-SM-2I5GX C1 8.7 Blood Whole Blood 0013756 BP-17518 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.452212 1.49118e+06 0.938528 0.459882 0.736817 21703 1 76 0.00425004 99 0 9.9391e+07 0.0601399 354834 2.16123e+08 7.07644e+07 21721 4.85335e+07 0 0.20171 0.459882 0.338849 9.9391e+07 0.0307001 2.12988e+07 1.32138e+08 2.18163e+07 122 2.25088e+07 2.02757e+07 0.0172545 2.21682e+07 49.6188 0.00164182 0.467552 0 50.6001 GTEX-O5YV-0008-SM-4E3HP C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988845 823710 0.969827 0.992282 0.843162 21453 1 76 0.00229069 286 0 1.02896e+08 0.0298315 334038 1.03697e+08 1.23581e+07 21469 5.11569e+07 0 0.126665 0.992282 0.836655 1.02896e+08 0.00338426 2.27175e+07 2.34938e+07 2.28749e+07 265 2.30445e+07 2.54686e+07 0.00283558 2.28968e+07 49.8393 0.0032213 0.995719 0 50.1727 GTEX-O5YV-0226-SM-48TBY 0 C1 26740: 0; central 40% hollow, unfixed. See Request below. 26794: 0; 15% hollow space' 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 237 1577 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991196 335439 0.978083 0.993082 0.815819 21815 1 76 0.00176345 166 0 7.64454e+07 0.0215958 543905 7.69779e+07 3.88968e+06 21837 3.80517e+07 0 0.162264 0.993082 0.810175 7.64454e+07 0.00247083 1.68415e+07 6.68027e+06 1.69166e+07 191 1.69543e+07 1.33732e+07 0.00211647 1.69439e+07 49.9847 0.00706573 0.994968 0 50.1113 GTEX-O5YV-0326-SM-2AXWH 0 C1 10x8 mm; 6.9 Heart Heart - Left Ventricle 0006566 248 1568 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-O5YV-0326-SM-2I5H2 0 C1 10x8 mm; 6.9 Heart Heart - Left Ventricle 0006566 248 1568 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.93944 293773 0.975332 0.944814 0.839726 22663 1 76 0.00301318 268 0 1.18912e+08 0.0244974 4.58e+06 1.25858e+08 2.55984e+07 22682 5.89642e+07 0 0.135605 0.944814 0.793385 1.18912e+08 0.010504 2.60543e+07 2.39724e+07 2.64168e+07 298 2.65317e+07 1.6674e+07 0.0067373 2.64571e+07 49.9296 0.0363904 0.950188 0 50.3455 GTEX-O5YV-0426-SM-3LK66 0 C1 20% adipose and stroma; wide lumen 7.7 Blood Vessel Artery - Coronary 0001621 252 1565 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.94501 174948 0.974327 0.945836 0.825812 22664 1 76 0.0023515 207 0 8.84319e+07 0.0253112 173473 9.3496e+07 9.09274e+06 22685 4.39449e+07 0 0.148515 0.945836 0.781083 8.84319e+07 0.00361014 1.91244e+07 8.83241e+06 1.93197e+07 215 1.93037e+07 1.75317e+07 0.00298027 1.9222e+07 49.8939 0.00185541 0.946662 0 50.2541 GTEX-O5YV-0526-SM-26GMJ 0 C1 10x6 mm; 2 mm defect, possible fixation artifact 6.1 Lung Lung 0008952 255 1562 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 Tech Dev EXCLUDE GTEX-O5YV-0526-SM-26GN1 0 C1 10x6 mm; 2 mm defect, possible fixation artifact 6.1 Lung Lung 0008952 255 1562 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 Tech Dev EXCLUDE GTEX-O5YV-0526-SM-2D7VZ 0 C1 10x6 mm; 2 mm defect, possible fixation artifact 6.1 Lung Lung 0008952 255 1562 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 Tech Dev EXCLUDE 0.970678 140704 0.974345 0.974399 0.805956 23563 1 101 0.00335879 204 0 7.92612e+07 0.0241858 534907 8.13437e+07 5.50302e+06 23576 3.9325e+07 0 0.168389 0.974399 0.785323 7.92612e+07 0.00451407 1.74252e+07 8.71812e+06 1.76734e+07 265 1.77455e+07 1.78108e+07 0.00393422 1.76357e+07 49.8448 0.00657589 0.97812 0 50.3535 GTEX-O5YV-0526-SM-2I5GE 0 C1 10x6 mm; 2 mm defect, possible fixation artifact 7.4 Lung Lung 0008952 255 1562 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.951527 305923 0.972763 0.957853 0.80083 25815 1 76 0.00337523 276 0 1.20374e+08 0.0264698 749108 1.25671e+08 2.40228e+07 25852 5.95812e+07 0 0.171933 0.957853 0.767077 1.20374e+08 0.0105418 2.64794e+07 1.89119e+07 2.66887e+07 293 2.69573e+07 2.21516e+07 0.00693486 2.69486e+07 49.9919 0.00596087 0.964179 0 50.1968 GTEX-O5YV-0526-SM-2M49G 0 C1 10x6 mm; 2 mm defect, possible fixation artifact 7.4 Lung Lung 0008952 255 1562 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-O5YV-0626-SM-3LK64 0 C1 3 pieces 7.6 Blood Vessel Artery - Aorta 0001496 258 1561 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.948583 238440 0.977284 0.948958 0.853404 22656 1 76 0.00228433 279 0 1.07619e+08 0.022264 182096 1.13408e+08 1.11094e+07 22678 5.34623e+07 0 0.12388 0.948958 0.809844 1.07619e+08 0.00348168 2.34646e+07 1.06316e+07 2.36099e+07 325 2.3627e+07 2.18209e+07 0.00288277 2.34953e+07 49.8602 0.00160568 0.949332 0 50.1543 GTEX-O5YV-0726-SM-EV798 0 C1 12x7 mm; apsule present; should be 1 cm deeper 5.7 Liver Liver 0001114 260 1560 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.988272 290815 0.978173 0.989447 0.828511 21251 1 76 0.00249788 268 0 9.69496e+07 0.0208272 1.62824e+06 9.79837e+07 1.00711e+07 21275 4.82644e+07 0 0.149661 0.989447 0.819768 9.69496e+07 0.0040407 2.1314e+07 1.5262e+07 2.15799e+07 311 2.15199e+07 1.61608e+07 0.00326837 2.14828e+07 49.9569 0.0166174 0.990622 0 50.3099 GTEX-O5YV-1026-SM-3LK72 0 C1 3 pieces 8.2 Esophagus Esophagus - Mucosa 0006920 270 1560 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.933395 287121 0.970046 0.933977 0.801698 22159 1 76 0.00246919 174 0 8.30593e+07 0.0296297 396604 8.89307e+07 8.24911e+06 22176 4.1288e+07 0 0.168348 0.933977 0.748768 8.30593e+07 0.00371324 1.8523e+07 1.36016e+07 1.86852e+07 186 1.86907e+07 1.57171e+07 0.00309083 1.85755e+07 49.8454 0.00445969 0.934559 0 50.2181 GTEX-O5YV-1126-SM-3LK73 1 C1 25% adipose 6.6 Adrenal Gland Adrenal Gland 0002369 273 1560 BP-17536 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.897717 234956 0.966122 0.898738 0.786797 23641 1 76 0.00251078 199 0 8.28375e+07 0.0333483 1.92855e+06 9.21709e+07 9.23511e+06 23671 4.11179e+07 0 0.179325 0.898738 0.707124 8.28375e+07 0.00384735 1.76977e+07 1.30722e+07 1.79727e+07 208 1.79439e+07 1.21042e+07 0.0031783 1.78192e+07 49.8257 0.0209236 0.899759 0 50.3854 GTEX-O5YV-1226-SM-EV795 1 C1 10x6 mm; CORTICAL TISSUE not medulla 5.6 Kidney Kidney - Cortex 0001225 275 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.984153 483539 0.977961 0.98552 0.807913 22493 1 76 0.00262604 190 0 7.45096e+07 0.021815 4.30978e+06 7.56044e+07 7.82127e+06 22508 3.70305e+07 0 0.170048 0.98552 0.796214 7.45096e+07 0.004426 1.6385e+07 3.09827e+07 1.64836e+07 207 1.66348e+07 8.53315e+06 0.00352477 1.63059e+07 49.5008 0.0570044 0.986887 0 50.15 GTEX-O5YV-1526-SM-EV799 1 C1 8x4 mm 5.7 Thyroid Thyroid 0002046 282 1560 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983473 343907 0.963192 0.98485 0.747364 24479 1 76 0.00245288 167 0 8.53814e+07 0.0365904 527698 8.66948e+07 9.06986e+06 24519 4.25029e+07 0 0.215828 0.98485 0.736041 8.53814e+07 0.00423931 1.84881e+07 9.10453e+06 1.86671e+07 194 1.86079e+07 1.25024e+07 0.00334485 1.86687e+07 50.0815 0.00608685 0.986227 0 50.2409 GTEX-O5YV-1626-SM-2QU48 0 C1 0; artery is 24% of area; mostly nerves 7.5 Blood Vessel Artery - Tibial 0007610 284 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-O5YV-1626-SM-2YUNJ 0 C1 0; artery is 24% of area; mostly nerves 7.5 Blood Vessel Artery - Tibial 0007610 284 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.966827 172314 0.973578 0.969952 0.837102 22259 1 76 0.00207625 227 0 8.96425e+07 0.0258817 388229 9.24196e+07 6.40366e+06 22284 4.44161e+07 0 0.136476 0.969952 0.811949 8.96425e+07 0.00290967 1.93592e+07 8.11101e+06 1.96581e+07 233 1.97633e+07 1.78032e+07 0.00249162 1.95267e+07 49.6989 0.00420072 0.973077 0 50.3831 GTEX-O5YV-1826-SM-2QU4A 0 C1 5x1.7 mm; 2.5 mm fatty tail 7.1 Nerve Nerve - Tibial 0001323 289 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-O5YV-1826-SM-2YUNI 0 C1 5x1.7 mm; 2.5 mm fatty tail 7.1 Nerve Nerve - Tibial 0001323 289 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.83271 175910 0.967344 0.834655 0.761581 23877 1 76 0.00224543 197 0 7.95706e+07 0.0323436 346029 9.53335e+07 8.66084e+06 23912 3.93454e+07 0 0.205763 0.834655 0.635657 7.95706e+07 0.00366056 1.74284e+07 9.00795e+06 1.77205e+07 179 1.77738e+07 1.28645e+07 0.00295135 1.75516e+07 49.6855 0.00362967 0.8366 0 50.4154 GTEX-O5YV-1926-SM-EV797 2 C1 2 (varies from 1-3) 5.5 Stomach Stomach 0000945 291 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.98565 230950 0.975089 0.986964 0.804711 23808 1 76 0.00249676 255 0 8.63637e+07 0.0247114 2.0631e+06 8.75044e+07 9.81924e+06 23847 4.30141e+07 0 0.170378 0.986964 0.794221 8.63637e+07 0.00404545 1.93184e+07 2.89514e+07 1.9552e+07 236 1.95260e+07 1.55723e+07 0.00327007 1.94578e+07 49.9125 0.023577 0.988278 0 50.3004 GTEX-O5YV-2026-SM-26GMK 0 C1 7x1 mm 7.1 Muscle Muscle - Skeletal 0011907 293 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 Tech Dev EXCLUDE GTEX-O5YV-2026-SM-26GN2 0 C1 7x1 mm 7.1 Muscle Muscle - Skeletal 0011907 293 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 Tech Dev EXCLUDE GTEX-O5YV-2026-SM-2D7VS 0 C1 7x1 mm 7.1 Muscle Muscle - Skeletal 0011907 293 1560 BP-17538 RNA isolation_PAXgene Tissue miRNA 07/12/2011 LCSET-1010_1 10/30/2011 TruSeq.v1 RNASEQ 0.833973 39210 0.982383 0.835765 0.853398 18411 1 101 0.00231557 124 0 4.67813e+07 0.0173385 1.38622e+06 5.59742e+07 5.59144e+06 18413 2.32595e+07 0 0.128985 0.835765 0.71324 4.67813e+07 0.00425065 1.0201e+07 4.15246e+06 1.0445e+07 146 1.04592e+07 1.09195e+07 0.00328104 1.02767e+07 49.5601 0.0247654 0.837557 0 50.5911 GTEX-O5YW-0003-SM-2H2WT B1 Blood Whole Blood 0013756 -43 BP-17579 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828068_R01C01 GTEX-O5YW-0003-SM-2XK1J B1 Blood Whole Blood 0013756 -43 BP-17579 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R05C02 GTEX-O5YW-0003-SM-4X5ZF B1 Blood Whole Blood 0013756 -43 BP-17579 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-O5YW-0003-SM-5JK2Y B1 Blood Whole Blood 0013756 -43 BP-17579 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/13/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-O5YW-0006-SM-2D45A B1 7.4 Blood Whole Blood 0013756 -43 BP-17612 RNA isolation_PAXgene Blood RNA (Manual) 07/14/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-O5YW-0006-SM-3LK6E B1 7.4 Blood Whole Blood 0013756 -43 BP-17612 RNA isolation_PAXgene Blood RNA (Manual) 07/14/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.808786 623356 0.961885 0.809386 0.789471 19621 1 76 0.0025041 131 0 8.79449e+07 0.0373761 378374 1.08656e+08 1.0978e+07 19631 4.36935e+07 0 0.172414 0.809386 0.638986 8.79449e+07 0.00427421 1.96062e+07 9.36869e+07 2.00001e+07 156 1.99675e+07 1.94122e+07 0.0033885 1.97376e+07 49.7104 0.0034823 0.809985 0 50.4972 GTEX-O5YW-0008-SM-4E3IE B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990537 785597 0.965722 0.993144 0.847755 21195 1 76 0.00230828 223 0 9.9199e+07 0.033929 567018 9.98838e+07 1.17258e+07 21214 4.93645e+07 0 0.117967 0.993144 0.841943 9.9199e+07 0.00329789 2.19333e+07 2.67845e+07 2.20678e+07 248 2.21924e+07 2.47679e+07 0.00280178 2.20625e+07 49.8532 0.00567678 0.995751 0 50.1529 GTEX-O5YW-0126-SM-2D45C 0 B1 3 pieces 5.4 Skin Skin - Sun Exposed (Lower leg) 0004264 194 1582 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-O5YW-0126-SM-3LK6D 0 B1 3 pieces 5.4 Skin Skin - Sun Exposed (Lower leg) 0004264 194 1582 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.967834 331505 0.967605 0.968667 0.816494 23475 1 76 0.00234007 216 0 8.25246e+07 0.0322061 844107 8.5194e+07 8.8371e+06 23501 4.10284e+07 0 0.151111 0.968667 0.790911 8.25246e+07 0.00346202 1.80255e+07 1.24047e+07 1.82479e+07 235 1.81902e+07 1.28766e+07 0.00290056 1.81559e+07 49.9527 0.00990806 0.969501 0 50.3066 GTEX-O5YW-0326-SM-2D45D 0 B1 9x8 mm 8 Heart Heart - Left Ventricle 0006566 138 1638 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-O5YW-0326-SM-2I5EI 0 B1 9x8 mm 8 Heart Heart - Left Ventricle 0006566 138 1638 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.831665 184192 0.981372 0.835954 0.845233 20390 1 76 0.00282392 194 0 8.25402e+07 0.0184027 3.09539e+06 9.87378e+07 2.1352e+07 20403 4.09155e+07 0 0.136139 0.835954 0.706575 8.25402e+07 0.0102963 1.78173e+07 2.44265e+07 1.82481e+07 214 1.81334e+07 1.11981e+07 0.00654097 1.81438e+07 50.0144 0.0313496 0.840242 0 50.5973 GTEX-O5YW-0426-SM-3MJHJ 0 B1 3 pieces, 1.7 mm thick 7.7 Blood Vessel Artery - Aorta 0001496 135 1641 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.986361 315429 0.974501 0.988775 0.842429 23166 1 76 0.00271345 277 0 9.89362e+07 0.0251214 321637 1.00059e+08 1.54536e+07 23187 4.9187e+07 0 0.132072 0.988775 0.832972 9.89362e+07 0.00481981 2.135e+07 1.01121e+07 2.17137e+07 290 2.17313e+07 1.81523e+07 0.00376405 2.15598e+07 49.8019 0.00321446 0.99119 0 50.4223 GTEX-O5YW-0526-SM-2M47W 0 B1 16x6 mm; mild edema 8.8 Lung Lung 0008952 132 1644 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-O5YW-0526-SM-2YUMX 0 B1 16x6 mm; mild edema 8.8 Lung Lung 0008952 132 1644 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.809183 139894 0.977446 0.812374 0.826101 23524 1 76 0.00212564 212 0 8.48295e+07 0.0221028 329461 1.04422e+08 1.0566e+07 23554 4.19133e+07 0 0.151345 0.812374 0.671103 8.48295e+07 0.00377605 1.87689e+07 7.496e+06 1.91153e+07 222 1.9261e+07 1.63696e+07 0.0029476 1.89402e+07 49.58 0.0031551 0.815565 0 50.4571 GTEX-O5YW-1426-SM-3MJHF 1 B1 3 pieces 2.6 mm thick, mucosa 0.4 mm; slight surface autolysis 8.5 Colon Colon - Transverse 0001157 161 1615 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-2269 01/27/2013 TruSeq.v1 RNASEQ 0.9711 299059 0.971203 0.972193 0.803109 25666 1 76 0.00254665 301 0 1.23257e+08 0.0284542 1.23434e+06 1.26782e+08 1.78205e+07 25716 6.13882e+07 0 0.168094 0.972193 0.780777 1.23257e+08 0.00385306 2.67448e+07 1.48541e+07 2.72636e+07 297 2.72639e+07 2.15598e+07 0.00319912 2.68633e+07 49.6299 0.00973589 0.973287 0 50.4802 GTEX-O5YW-1526-SM-3MJGL 1 B1 3 pieces, 3.4 mm width; mucosa 0.7 mm thick; mild surface autolysis 6.6 Stomach Stomach 0000945 169 1607 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.980496 809395 0.963192 0.982872 0.8304 23428 1 76 0.00280948 387 0 1.08757e+08 0.0361183 778030 1.10652e+08 1.70538e+07 23460 5.40645e+07 0 0.132792 0.982872 0.816177 1.08757e+08 0.00512983 2.42677e+07 1.58449e+08 2.51843e+07 315 2.51896e+07 2.8724e+07 0.00396685 2.45376e+07 49.3444 0.00703134 0.985247 0 50.9268 GTEX-O5YW-1826-SM-2M47V 0 B1 2 pieces, 3x2 mm; 80% atheromatous intimal narrowing 7.7 Blood Vessel Artery - Tibial 0007610 203 1573 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-O5YW-1826-SM-2YUN2 0 B1 2 pieces, 3x2 mm; 80% atheromatous intimal narrowing 7.7 Blood Vessel Artery - Tibial 0007610 203 1573 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.527284 105641 0.970972 0.527465 0.826693 20144 1 76 0.00209041 99 0 4.22747e+07 0.0286123 200481 8.01469e+07 1.081e+07 20152 2.09155e+07 0 0.144279 0.527465 0.436052 4.22747e+07 0.00364582 9.00692e+06 5.24494e+06 9.2484e+06 99 9.22084e+06 7.70714e+06 0.00286785 9.04445e+06 49.5172 0.00250142 0.527647 0 50.6614 GTEX-O5YW-3026-SM-3MJHI 0 B1 2 pieces, 2.9 mm diameter; 40% atherosclerotic occlusion 7.9 Blood Vessel Artery - Coronary 0001621 148 1628 BP-17669 RNA isolation_PAXgene Tissue miRNA 07/18/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.958178 314300 0.973918 0.960933 0.841222 23731 1 76 0.00275605 377 0 1.07205e+08 0.0257381 476150 1.11563e+08 1.76772e+07 23758 5.32849e+07 0 0.132696 0.960933 0.808358 1.07205e+08 0.00521519 2.30154e+07 1.20079e+07 2.35181e+07 331 2.35004e+07 2.00426e+07 0.0039821 2.33135e+07 49.8004 0.00426798 0.963687 0 50.5401 GTEX-OHPJ-0003-SM-2H2WV C1 Blood Whole Blood 0013756 289 BP-17641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array EXCLUDE 6293828068_R02C01 GTEX-OHPJ-0003-SM-2XK1G C1 Blood Whole Blood 0013756 289 BP-17641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/15/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R05C02 GTEX-OHPJ-0006-SM-2D459 C1 8.4 Blood Whole Blood 0013756 BP-17640 RNA isolation_PAXgene Blood RNA (Manual) 07/15/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-0006-SM-3LK6G C1 8.4 Blood Whole Blood 0013756 BP-17640 RNA isolation_PAXgene Blood RNA (Manual) 07/15/2011 LCSET-2234 12/16/2012 TruSeq.v1 EXCLUDE 0.866868 756218 0.956009 0.867571 0.780059 20803 1 76 0.00248589 124 0 8.47456e+07 0.0431952 155163 9.76815e+07 9.42285e+06 20821 4.21107e+07 0 0.17595 0.867571 0.676756 8.47456e+07 0.00391528 1.89233e+07 8.57504e+07 1.90794e+07 151 1.90643e+07 1.87618e+07 0.00320001 1.90245e+07 49.9478 0.00158846 0.868274 0 50.2054 GTEX-OHPJ-0008-SM-4E3JG C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.988442 974353 0.966753 0.9922 0.859923 20315 1 76 0.0022826 177 0 8.90119e+07 0.0329507 226553 8.97117e+07 1.04652e+07 20329 4.42289e+07 0 0.10683 0.9922 0.853216 8.90119e+07 0.00348957 1.96661e+07 2.44495e+07 1.97956e+07 194 1.99606e+07 2.26832e+07 0.0028838 1.98337e+07 49.8406 0.00252535 0.995958 0 50.164 GTEX-OHPJ-0226-SM-2D45E 0 C1 Epidermis is ~3-4% of total specimen thickness 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 406 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-0526-SM-2D45B 1 C1 2 x 1 mm adenomatoid nodule, peripheral 6.6 Thyroid Thyroid 0002046 424 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-0526-SM-2HMJR 1 C1 2 x 1 mm adenomatoid nodule, peripheral 6.6 Thyroid Thyroid 0002046 424 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.536421 460829 0.957137 0.543131 0.774948 25549 1 76 0.00398462 133 0 8.80604e+07 0.0423187 775029 1.62135e+08 4.34781e+07 25588 4.31963e+07 0 0.182189 0.543131 0.420899 8.80604e+07 0.0140494 1.87469e+07 2.48906e+07 1.91437e+07 160 1.96236e+07 1.30043e+07 0.00895484 1.92482e+07 49.5172 0.00478016 0.549842 0 50.5237 GTEX-OHPJ-0526-SM-EZ6XQ 1 C1 2 x 1 mm adenomatoid nodule, peripheral Thyroid Thyroid 0002046 424 1560 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-OHPJ-0626-SM-2M47U 1 C1 2 pieces (fragments) of smooth muscle, probable small muscular artery origin, c/w corresponding -25 block 7.8 Blood Vessel Artery - Tibial 0007610 425 1561 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OHPJ-0626-SM-2YUMY 1 C1 2 pieces (fragments) of smooth muscle, probable small muscular artery origin, c/w corresponding -25 block 7.8 Blood Vessel Artery - Tibial 0007610 425 1561 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.88041 124634 0.974775 0.883819 0.825678 20967 1 76 0.0021524 141 0 6.90007e+07 0.0248111 299682 7.80711e+07 6.60297e+06 20984 3.4131e+07 0 0.149098 0.883819 0.729749 6.90007e+07 0.00342311 1.47985e+07 5.33532e+06 1.50759e+07 157 1.51728e+07 1.29369e+07 0.00278531 1.49482e+07 49.6271 0.00383858 0.887228 0 50.4643 GTEX-OHPJ-0726-SM-2M47S 1 C1 1 piece adipose tissue; probably reflects periperhal 'contaminant' fat noted in corresponding =25 block but would require additional dissection, hence unacceptabe 7.5 Nerve Nerve - Tibial 0001323 428 1561 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OHPJ-0726-SM-2YUNM 1 C1 1 piece adipose tissue; probably reflects periperhal 'contaminant' fat noted in corresponding =25 block but would require additional dissection, hence unacceptabe 7.5 Nerve Nerve - Tibial 0001323 428 1561 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.760997 113440 0.971683 0.762369 0.794394 23614 1 76 0.00216233 194 0 8.08413e+07 0.0278805 267845 1.0604e+08 1.03362e+07 23647 3.99989e+07 0 0.177289 0.762369 0.605621 8.08413e+07 0.00371775 1.77366e+07 6.49236e+06 1.805e+07 194 1.80949e+07 1.42208e+07 0.00293864 1.78339e+07 49.6368 0.0025259 0.763741 0 50.4379 GTEX-OHPJ-0926-SM-2D45G 0 C1 Minimal ischemic changes 8.2 Heart Heart - Left Ventricle 0006566 437 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-0926-SM-2HMJ1 0 C1 Minimal ischemic changes 8.2 Heart Heart - Left Ventricle 0006566 437 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 EXCLUDE 0.665536 55886 0.981331 0.66902 0.861777 20366 1 76 0.00250992 105 0 5.67784e+07 0.0184623 1.25422e+06 8.4868e+07 1.34852e+07 20374 2.81338e+07 0 0.119555 0.66902 0.576546 5.67784e+07 0.00927663 1.22182e+07 6.73839e+06 1.26864e+07 134 1.27696e+07 8.6015e+06 0.00587565 1.23659e+07 49.197 0.0147785 0.672504 0 50.94 GTEX-OHPJ-1026-SM-2D45F 0 C1 Remarkably well-preserved; minimal inflammation 8.1 Lung Lung 0008952 442 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-1026-SM-2HMLE 0 C1 Remarkably well-preserved; minimal inflammation 8.1 Lung Lung 0008952 442 1560 BP-17749 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 EXCLUDE 0.646897 80499 0.970226 0.653004 0.772201 24068 1 76 0.00288119 118 0 6.04701e+07 0.0293184 340544 9.2603e+07 1.61019e+07 24096 2.97984e+07 0 0.198026 0.653004 0.50425 6.04701e+07 0.0102998 1.31785e+07 5.91882e+06 1.34436e+07 121 1.36555e+07 9.68944e+06 0.00655579 1.34886e+07 49.6926 0.00367746 0.65911 0 50.4977 GTEX-OHPJ-1326-SM-3MJHG 0 C1 6 pieces 6.8 Esophagus Esophagus - Muscularis 0004648 449 1560 BP-17750 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 EXCLUDE 0.983968 344718 0.973629 0.986284 0.812133 23795 1 76 0.00282791 379 0 1.14825e+08 0.0261613 1.48363e+06 1.16422e+08 1.76797e+07 23827 5.70932e+07 0 0.161495 0.986284 0.800994 1.14825e+08 0.00501651 2.47009e+07 1.46896e+07 2.53004e+07 334 2.52856e+07 1.70842e+07 0.00391964 2.49546e+07 49.6706 0.0127436 0.988601 0 50.5995 GTEX-OHPJ-1626-SM-2D458 0 C1 Minimal interstitial fat 7.5 Muscle Muscle - Skeletal 0011907 456 1560 BP-17750 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPJ-1626-SM-2HMKO 0 C1 Minimal interstitial fat 7.5 Muscle Muscle - Skeletal 0011907 456 1560 BP-17750 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 EXCLUDE 0.858714 153659 0.981395 0.865218 0.881438 19612 1 76 0.00246814 207 0 8.92958e+07 0.0183735 1.68854e+06 1.03206e+08 1.49171e+07 19621 4.41507e+07 0 0.0999567 0.865218 0.762636 8.92958e+07 0.00929693 1.86605e+07 1.3145e+07 1.94354e+07 215 1.95786e+07 1.76537e+07 0.00585687 1.90562e+07 49.3239 0.0163609 0.871721 0 51.017 GTEX-OHPK-0003-SM-2H2WX B1 Blood Whole Blood 0013756 -232 BP-17684 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828068_R03C01 GTEX-OHPK-0003-SM-2XJZU B1 Blood Whole Blood 0013756 -232 BP-17684 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R03C02 GTEX-OHPK-0003-SM-3USRN B1 Blood Whole Blood 0013756 -232 BP-17684 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OHPK-0003-SM-5JK4Z B1 Blood Whole Blood 0013756 -232 BP-17684 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2011 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS v1 (HiSeq2000) EXCLUDE GTEX-OHPK-0006-SM-2D45H B1 6.7 Blood Whole Blood 0013756 -232 BP-17677 RNA isolation_PAXgene Blood RNA (Manual) 07/18/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPK-0006-SM-2HMKH B1 6.7 Blood Whole Blood 0013756 -232 BP-17677 RNA isolation_PAXgene Blood RNA (Manual) 07/18/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.87119 764927 0.950147 0.877445 0.786572 18840 1 76 0.0032857 124 0 9.34942e+07 0.0487527 229973 1.06553e+08 1.69568e+07 18850 4.6222e+07 0 0.163575 0.877445 0.690174 9.34942e+07 0.0100473 2.02037e+07 1.01696e+08 2.08955e+07 152 2.12099e+07 2.09696e+07 0.0066424 2.05274e+07 49.1823 0.0021583 0.883701 0 50.8417 GTEX-OHPK-0008-SM-4E3JL B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 264 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989337 1.05049e+06 0.966956 0.992614 0.845587 21355 1 76 0.00247427 222 0 9.924e+07 0.0327223 399057 9.99784e+07 1.08632e+07 21374 4.93287e+07 0 0.121369 0.992614 0.839341 9.924e+07 0.00365477 2.17228e+07 2.54938e+07 2.19197e+07 225 2.20651e+07 2.4513e+07 0.00306257 2.19043e+07 49.8171 0.00399143 0.995891 0 50.2256 GTEX-OHPK-0226-SM-3MJH6 0 B1 section is ragged and has large holes. Most of the nuclei have fallen out of the section. Evaluation limited by poor technical quality of section. Aliquot is oversized (17.7x13mm). Central 90% is unfixed; REFIX 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 275 245 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.983739 251896 0.973266 0.986224 0.803405 24360 1 76 0.00313876 286 0 1.08901e+08 0.0263816 637762 1.10422e+08 1.71163e+07 24403 5.41289e+07 0 0.16986 0.986224 0.792338 1.08901e+08 0.00536098 2.37289e+07 1.1523e+07 2.41744e+07 318 2.42198e+07 1.82055e+07 0.00424707 2.39388e+07 49.7083 0.00577568 0.988709 0 50.465 GTEX-OHPK-0326-SM-2D456 0 B1 section is ragged and has holes. Autolysis is minimal, but tissue shows ischemic change (contraction bands). Also there is scar c/w old infarct/ischemic heart disease. Aliquot is oversized (20x10mm). Central part is poorly fixed. No need to re-fix. 7.3 Heart Heart - Left Ventricle 0006566 313 1647 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPK-0326-SM-2HMJO 0 B1 section is ragged and has holes. Autolysis is minimal, but tissue shows ischemic change (contraction bands). Also there is scar c/w old infarct/ischemic heart disease. Aliquot is oversized (20x10mm). Central part is poorly fixed. No need to re-fix. 7.3 Heart Heart - Left Ventricle 0006566 313 1647 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.964952 113825 0.983124 0.972609 0.85437 21381 1 76 0.0039217 267 0 1.06418e+08 0.0166542 4.06904e+06 1.09415e+08 1.4387e+07 21396 5.26513e+07 0 0.128754 0.972609 0.830968 1.06418e+08 0.0101794 2.23705e+07 2.41093e+07 2.32114e+07 293 2.31971e+07 1.46774e+07 0.00702591 2.29899e+07 49.7758 0.0371892 0.980265 0 50.9224 GTEX-OHPK-0426-SM-3MJH3 0 B1 fairly well preserved, although endothelium is denuded 7.8 Blood Vessel Artery - Aorta 0001496 314 1646 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.988522 309828 0.973351 0.990311 0.838969 23708 1 76 0.0028825 285 0 1.30146e+08 0.0261945 398779 1.31419e+08 1.95849e+07 23743 6.48099e+07 0 0.134381 0.990311 0.830841 1.30146e+08 0.00438703 2.78581e+07 1.34765e+07 2.83205e+07 298 2.83264e+07 2.56258e+07 0.00363341 2.80668e+07 49.7698 0.0030344 0.9921 0 50.4115 GTEX-OHPK-0526-SM-2D455 2 B1 looks like severe aspiration pneumonia. Sloughing of alveolar epithelium is probably postmortem. There are large cells vs. aspirated material throughout. Aliquot is oversized (14.7x13.7mm). Central part is poorly fixed. REFIX. 6.5 Lung Lung 0008952 315 1645 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPK-0526-SM-2HMJB 2 B1 looks like severe aspiration pneumonia. Sloughing of alveolar epithelium is probably postmortem. There are large cells vs. aspirated material throughout. Aliquot is oversized (14.7x13.7mm). Central part is poorly fixed. REFIX. 6.5 Lung Lung 0008952 315 1645 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.60478 114084 0.969832 0.614877 0.776004 25571 1 76 0.00431818 134 0 9.18155e+07 0.0298795 954412 1.49323e+08 5.56305e+07 25601 4.49691e+07 0 0.193828 0.614877 0.477147 9.18155e+07 0.0257496 1.97075e+07 1.10379e+07 2.01783e+07 149 2.07513e+07 1.29706e+07 0.0148579 2.05105e+07 49.7082 0.00639158 0.624974 0 50.5902 GTEX-OHPK-1326-SM-3MJGN 1 B1 surprisingly good quality for an autopsy. Both cortex and medulla are present 7.1 Adrenal Gland Adrenal Gland 0002369 316 1644 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984803 301870 0.975253 0.987273 0.836083 24375 1 76 0.00372383 373 0 1.17256e+08 0.0244538 3.22295e+06 1.18768e+08 1.919e+07 24408 5.83002e+07 0 0.13917 0.987273 0.825443 1.17256e+08 0.00594857 2.53071e+07 1.70693e+07 2.60697e+07 335 2.60156e+07 1.61697e+07 0.00483342 2.5602e+07 49.5994 0.0271366 0.989743 0 50.7422 GTEX-OHPK-1526-SM-3MJGM 1 B1 corpus mucosa, good preservation 7.1 Stomach Stomach 0000945 315 1645 BP-17780 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.981208 275293 0.97718 0.983932 0.84542 24108 1 76 0.00337262 429 0 1.1668e+08 0.0221717 1.94495e+06 1.18586e+08 1.88485e+07 24141 5.79792e+07 0 0.131759 0.983932 0.831836 1.1668e+08 0.0057087 2.60193e+07 8.21741e+07 2.68355e+07 342 2.68607e+07 2.61668e+07 0.00453743 2.62966e+07 49.4694 0.0164012 0.986657 0 50.7721 GTEX-OHPK-1626-SM-2M47T 1 B1 but fixation is suboptimal and section has shattered. Aliquot is oversized (18x12.6mm). Central part is poorly fixed. REFIX 6.9 Muscle Muscle - Skeletal 0011907 441 1519 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OHPK-1626-SM-2YUN3 1 B1 but fixation is suboptimal and section has shattered. Aliquot is oversized (18x12.6mm). Central part is poorly fixed. REFIX 6.9 Muscle Muscle - Skeletal 0011907 441 1519 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.850745 326741 0.963124 0.852329 0.855748 19890 1 76 0.00259492 132 0 7.72485e+07 0.0365984 981913 9.06323e+07 8.46754e+06 19894 3.82428e+07 0 0.107376 0.852329 0.729379 7.72485e+07 0.00418744 1.57317e+07 1.6444e+07 1.62788e+07 160 1.62599e+07 1.55056e+07 0.0033897 1.58614e+07 49.3797 0.010834 0.853913 0 50.8546 GTEX-OHPK-1726-SM-48TC4 1 B1 perineural edema 5.9 Nerve Nerve - Tibial 0001323 441 1519 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.988272 156632 0.97159 0.98974 0.824346 22271 1 76 0.00199513 145 0 6.10376e+07 0.0281243 317414 6.16703e+07 3.25166e+06 22292 3.03955e+07 0 0.147244 0.98974 0.815889 6.10376e+07 0.00264896 1.33879e+07 5.34912e+06 1.34726e+07 152 1.34548e+07 1.04698e+07 0.00232156 1.34947e+07 50.074 0.00514695 0.991208 0 50.1577 GTEX-OHPK-1826-SM-2M47R 1 B1 mild athersclerotic vascular disease 6.7 Blood Vessel Artery - Tibial 0007610 441 1519 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OHPK-1826-SM-2YUMR 1 B1 mild athersclerotic vascular disease 6.7 Blood Vessel Artery - Tibial 0007610 441 1519 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.845319 188643 0.972971 0.847167 0.843354 22190 1 76 0.00237267 280 0 9.40817e+07 0.0266398 470311 1.11054e+08 9.77689e+06 22213 4.65294e+07 0 0.129617 0.847167 0.714462 9.40817e+07 0.00372711 2.00051e+07 8.90252e+06 2.03866e+07 257 2.0418e+07 1.79404e+07 0.00304841 2.01582e+07 49.6798 0.00423496 0.849016 0 50.4722 GTEX-OHPK-2026-SM-3MJH7 1 B1 myometrium, lots of parametrical vessels, no endomterium 6.6 Uterus Uterus 0000995 321 1639 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.888013 306537 0.967441 0.888631 0.79819 24173 1 76 0.00296972 208 0 9.63718e+07 0.0321975 518196 1.0845e+08 1.63201e+07 24202 4.78476e+07 0 0.169251 0.888631 0.709296 9.63718e+07 0.00518941 2.09133e+07 1.17513e+07 2.13466e+07 236 2.12875e+07 1.65151e+07 0.00407879 2.10388e+07 49.7061 0.00477821 0.889249 0 50.5127 GTEX-OHPK-2326-SM-3MJH2 1 B1 isthmic portion 6.1 Fallopian Tube Fallopian Tube 0003889 520 1440 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.98865 245836 0.972711 0.990964 0.834999 23909 1 76 0.0030772 280 0 1.04206e+08 0.0269263 589716 1.05157e+08 1.60904e+07 23937 5.18175e+07 0 0.137712 0.990964 0.827454 1.04206e+08 0.00518422 2.23902e+07 1.03911e+07 2.28604e+07 308 2.28341e+07 1.87306e+07 0.00412825 2.26425e+07 49.7894 0.00560798 0.993278 0 50.5196 GTEX-OHPK-2426-SM-3MJGH 1 B1 lots of corpora albicantia 8.1 Ovary Ovary 0000992 521 1439 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.980906 282460 0.967931 0.983235 0.802154 23841 1 76 0.00293788 221 0 1.03117e+08 0.0317749 255688 1.04875e+08 1.45506e+07 23877 5.12723e+07 0 0.165777 0.983235 0.788706 1.03117e+08 0.00512923 2.24183e+07 1.35361e+07 2.28478e+07 241 2.28591e+07 2.05519e+07 0.00403096 2.26452e+07 49.765 0.00243801 0.985565 0 50.4745 GTEX-OHPK-2526-SM-3MJH9 1 B1 unremarkable 7.3 Vagina Vagina 0000996 321 1639 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984944 296978 0.971208 0.987144 0.799775 24162 1 76 0.00317823 179 0 8.96219e+07 0.0282285 301860 9.07891e+07 1.39256e+07 24199 4.45466e+07 0 0.171433 0.987144 0.789493 8.96219e+07 0.00510857 1.97009e+07 1.30713e+07 2.00081e+07 186 2.00491e+07 1.72416e+07 0.00414125 1.98505e+07 49.7512 0.00332485 0.989344 0 50.3868 GTEX-OHPK-2626-SM-2D457 1 B1 nodular change. Aliquot is oversized (15x9mm). Central part is poorly fixed. REFIX. 6.1 Thyroid Thyroid 0002046 521 1439 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OHPK-2626-SM-2HMK9 1 B1 nodular change. Aliquot is oversized (15x9mm). Central part is poorly fixed. REFIX. 6.1 Thyroid Thyroid 0002046 521 1439 BP-17781 RNA isolation_PAXgene Tissue miRNA 07/20/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.935766 237181 0.963349 0.945538 0.758575 25311 1 76 0.00320073 208 0 9.87785e+07 0.0363824 674921 1.04468e+08 1.38751e+07 25363 4.87112e+07 0 0.204774 0.945538 0.717262 9.87785e+07 0.00951745 2.112e+07 1.39402e+07 2.14218e+07 216 2.18523e+07 1.5073e+07 0.00632645 2.16055e+07 49.716 0.00646055 0.955311 0 50.3547 GTEX-OHPL-0003-SM-2BWY5 B1 Blood Whole Blood 0013756 -81 BP-17728 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828067_R01C01 GTEX-OHPL-0003-SM-2XJZS B1 Blood Whole Blood 0013756 -81 BP-17728 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R05C01 GTEX-OHPL-0003-SM-4X5ZG B1 Blood Whole Blood 0013756 -81 BP-17728 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OHPL-0003-SM-5JK38 B1 Blood Whole Blood 0013756 -81 BP-17728 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/19/2011 LCSET-5036,LCSET-7900 10/03/2015 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-OHPL-0006-SM-3MJHB B1 8.8 Blood Whole Blood 0013756 -81 BP-17762 RNA isolation_PAXgene Blood RNA (Manual) 07/20/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.94511 961872 0.953947 0.947316 0.75014 20448 1 76 0.00296221 202 0 1.11877e+08 0.0456116 277390 1.18098e+08 1.88837e+07 20464 5.56004e+07 0 0.203808 0.947316 0.710619 1.11877e+08 0.00545687 2.41861e+07 7.48172e+07 2.46737e+07 221 2.47443e+07 2.14826e+07 0.00420664 2.4373e+07 49.622 0.0023488 0.949522 0 50.499 GTEX-OHPL-0008-SM-4E3I9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98815 1.02662e+06 0.968615 0.991652 0.861514 21860 1 76 0.00228198 288 0 1.11668e+08 0.0310701 647311 1.12608e+08 1.30364e+07 21878 5.55072e+07 0 0.1071 0.991652 0.854322 1.11668e+08 0.00345858 2.4509e+07 2.70128e+07 2.46825e+07 298 2.48357e+07 2.76049e+07 0.0028682 2.4742e+07 49.9055 0.00574837 0.995154 0 50.1764 GTEX-OHPL-0126-SM-2AXUS 0 B1 3 pieces. 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 189 1563 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPL-0126-SM-2HMJ7 0 B1 3 pieces. 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 189 1563 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.778724 133089 0.97023 0.783852 0.812461 22828 1 76 0.00270625 144 0 6.71973e+07 0.0295964 721907 8.5727e+07 1.32935e+07 22850 3.32396e+07 0 0.157769 0.783852 0.636849 6.71973e+07 0.00963512 1.46738e+07 9.04432e+06 1.48348e+07 146 1.50086e+07 1.06177e+07 0.00614802 1.48975e+07 49.8142 0.008421 0.788981 0 50.2728 GTEX-OHPL-0326-SM-2AXV1 0 B1 Hypertrophic nuclei 8.5 Heart Heart - Left Ventricle 0006566 84 1653 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPL-0326-SM-2HMKS 0 B1 Hypertrophic nuclei 8.5 Heart Heart - Left Ventricle 0006566 84 1653 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.143425 34520 0.982025 0.158063 0.865692 18577 1 76 0.00384276 82 0 3.93703e+07 0.0167978 1.08517e+06 2.4908e+08 9.45905e+07 18579 1.76756e+07 0 0.116333 0.158063 0.136834 3.93703e+07 0.099472 7.85005e+06 6.69595e+06 7.9293e+06 100 9.4587e+06 6.21715e+06 0.0472293 9.45636e+06 49.9938 0.00435672 0.172701 0 50.2511 GTEX-OHPL-0326-SM-33HC8 0 B1 Hypertrophic nuclei 8.5 Heart Heart - Left Ventricle 0006566 84 1653 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.947568 278334 0.985756 0.950361 0.865285 21918 1 76 0.00210658 517 0 1.6045e+08 0.0140019 4.86796e+06 1.68831e+08 1.45769e+07 21934 7.97679e+07 0 0.120471 0.950361 0.822333 1.6045e+08 0.00612628 3.49856e+07 3.92155e+07 3.56924e+07 473 3.49784e+07 2.05048e+07 0.00411053 3.60058e+07 50.7237 0.0288333 0.953153 0 50.5 GTEX-OHPL-0426-SM-3TW8X 1 B1 No lesions 7.8 Blood Vessel Artery - Aorta 0001496 94 1645 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.993088 325738 0.977512 0.994635 0.867115 22174 1 76 0.00240527 280 0 1.17003e+08 0.0220902 377033 1.17634e+08 1.54534e+07 22188 5.82977e+07 0 0.110397 0.994635 0.862463 1.17003e+08 0.0038127 2.5478e+07 1.22642e+07 2.57614e+07 303 2.57793e+07 2.33934e+07 0.00310789 2.5632e+07 49.8567 0.00320514 0.996182 0 50.2765 GTEX-OHPL-0526-SM-2AXUW 1 B1 Bronchopneumonia; aspiration? 8.5 Lung Lung 0008952 104 1635 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPL-0526-SM-2HMIX 1 B1 Bronchopneumonia; aspiration? 8.5 Lung Lung 0008952 104 1635 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 EXCLUDE 0.712211 82762 0.975749 0.717377 0.833946 23531 1 76 0.00275963 134 0 6.66399e+07 0.0234433 430317 9.28939e+07 1.40367e+07 23551 3.28706e+07 0 0.141803 0.717377 0.598254 6.66399e+07 0.00967312 1.4643e+07 6.19053e+06 1.48854e+07 142 1.50616e+07 1.23508e+07 0.00619148 1.49122e+07 49.7508 0.00463235 0.722543 0 50.4105 GTEX-OHPL-0526-SM-3NM8U 1 B1 Bronchopneumonia; aspiration? 8.5 Lung Lung 0008952 104 1635 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989279 478739 0.973707 0.9917 0.821622 25034 1 76 0.00400609 278 0 1.08133e+08 0.0254183 500939 1.09038e+08 2.09731e+07 25060 5.37495e+07 0 0.152085 0.9917 0.814802 1.08133e+08 0.00523509 2.40002e+07 1.30435e+07 2.40393e+07 288 2.40989e+07 2.02581e+07 0.00461909 2.42003e+07 50.105 0.00459417 0.994121 0 50.0407 GTEX-OHPL-0526-SM-4M1XS 1 B1 Bronchopneumonia; aspiration? 8.5 Lung Lung 0008952 104 1635 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-3633 08/24/2013 TruSeq.v1 EXCLUDE 0.989857 183161 0.975821 0.992554 0.827014 22517 1 76 0.00196506 130 0 5.9719e+07 0.0233056 269956 6.0167e+07 2.01504e+06 22534 2.96896e+07 0 0.148807 0.992554 0.820856 5.9719e+07 0.00282864 1.32328e+07 5.17467e+06 1.33813e+07 149 1.3407e+07 1.12757e+07 0.00239568 1.3366e+07 49.9236 0.00448678 0.995251 0 50.2791 GTEX-OHPL-0626-SM-3MJGJ 0 B1 3 pieces. 8.3 Esophagus Esophagus - Muscularis 0004648 117 1623 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2269 11/19/2012 TruSeq.v1 EXCLUDE 0.855466 321111 0.976241 0.856366 0.856272 23197 1 76 0.00283598 277 0 9.99114e+07 0.0233157 551583 1.16669e+08 1.96512e+07 23217 4.96145e+07 0 0.119969 0.856366 0.733283 9.99114e+07 0.00517623 2.22597e+07 1.69051e+07 2.28035e+07 274 2.27569e+07 2.03419e+07 0.00400487 2.24107e+07 49.6168 0.00472776 0.857267 0 50.6034 GTEX-OHPL-0726-SM-3TW8U 0 B1 Good epithelium 8.3 Esophagus Esophagus - Mucosa 0006920 120 1621 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2622 01/26/2013 TruSeq.v1 EXCLUDE 0.993145 345515 0.975204 0.994603 0.848112 24554 1 76 0.00243758 285 0 1.20366e+08 0.024455 845030 1.21019e+08 1.58165e+07 24577 5.99794e+07 0 0.127092 0.994603 0.843535 1.20366e+08 0.00381123 2.63133e+07 1.38776e+07 2.64959e+07 305 2.65052e+07 2.27621e+07 0.0031234 2.64656e+07 49.9626 0.00698261 0.996061 0 50.1729 GTEX-OHPL-1026-SM-3MJGI 0 B1 Fat is about 20% of aliquot 6.8 Pancreas Pancreas 0001150 138 1604 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.988172 310001 0.977074 0.99048 0.856836 22421 1 76 0.00298316 134 0 9.54408e+07 0.022416 491080 9.63580e+07 1.45407e+07 22441 4.74748e+07 0 0.120239 0.99048 0.848679 9.54408e+07 0.0050759 2.15612e+07 2.52015e+07 2.2148e+07 154 2.21091e+07 2.70931e+07 0.00402709 2.18188e+07 49.6695 0.00509641 0.992789 0 50.6713 GTEX-OHPL-1326-SM-3MJGG 0 B1 1 piece 9.1 Adrenal Gland Adrenal Gland 0002369 63 1673 BP-17822 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.978367 369649 0.976444 0.980714 0.845071 23931 1 76 0.00268845 375 0 1.1839e+08 0.0232198 2.97899e+06 1.20718e+08 1.85159e+07 23962 5.88859e+07 0 0.131373 0.980714 0.828773 1.1839e+08 0.0049302 2.60358e+07 1.55015e+07 2.67237e+07 340 2.66856e+07 2.00883e+07 0.00380665 2.63156e+07 49.6509 0.0246772 0.983061 0 50.652 GTEX-OHPL-1626-SM-2AXUX 1 B1 Mislabeled ovary in Aperio; slide number correct in Aperio 8 Muscle Muscle - Skeletal 0011907 193 1561 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPL-1626-SM-2HMIR 1 B1 Mislabeled ovary in Aperio; slide number correct in Aperio 8 Muscle Muscle - Skeletal 0011907 193 1561 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.941525 114209 0.983186 0.948179 0.882557 20966 1 76 0.00240988 274 0 9.38704e+07 0.0165842 1.2979e+06 9.90008e+07 1.39423e+07 20977 4.647e+07 0 0.100629 0.948179 0.836822 9.38704e+07 0.00869436 2.01234e+07 8.94718e+06 2.05232e+07 262 2.07463e+07 1.91922e+07 0.00553007 2.04639e+07 49.6574 0.01311 0.954832 0 50.4918 GTEX-OHPL-1826-SM-2QU3B 0 B1 Artery, vein, nerve 7.8 Blood Vessel Artery - Tibial 0007610 191 1561 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OHPL-1826-SM-2YUN8 0 B1 Artery, vein, nerve 7.8 Blood Vessel Artery - Tibial 0007610 191 1561 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.966915 146524 0.976784 0.970341 0.821226 23598 1 76 0.00204679 277 0 9.32393e+07 0.0229119 473715 9.60892e+07 7.35704e+06 23636 4.61771e+07 0 0.155559 0.970341 0.796869 9.32393e+07 0.0029818 2.03921e+07 7.36281e+06 2.07625e+07 257 2.0868e+07 1.69409e+07 0.00251264 2.05958e+07 49.6718 0.00492995 0.973767 0 50.4501 GTEX-OHPL-2026-SM-3TW8R 1 B1 small number of glands 7.6 Uterus Uterus 0000995 154 1590 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992075 483375 0.970477 0.993681 0.807881 24469 1 76 0.00248503 284 0 1.28941e+08 0.0292552 514856 1.29761e+08 1.69946e+07 24505 6.42366e+07 0 0.162597 0.993681 0.802776 1.28941e+08 0.00391329 2.81998e+07 1.72812e+07 2.84593e+07 310 2.84626e+07 2.2747e+07 0.00319801 2.83936e+07 49.9394 0.00396773 0.995287 0 50.229 GTEX-OHPL-2426-SM-48TDN 1 B1 parenchyma ~20% 5.9 Ovary Ovary 0000992 141 1602 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99096 208008 0.970522 0.992898 0.804041 21547 1 76 0.00162345 134 0 5.90558e+07 0.0293012 222771 5.94782e+07 2.96253e+06 21563 2.94044e+07 0 0.166481 0.992898 0.798331 5.90558e+07 0.00227837 1.30369e+07 6.72835e+06 1.31257e+07 146 1.31169e+07 9.80646e+06 0.00195027 1.31538e+07 50.0703 0.00374542 0.994835 0 50.1699 GTEX-OHPL-2526-SM-3MJGT 1 B1 3 pieces. Mild chronic inflammation 8.4 Vagina Vagina 0000996 166 1580 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.986662 415977 0.972306 0.98893 0.82044 25280 1 76 0.00284373 382 0 1.12105e+08 0.0268695 346596 1.1336e+08 1.72299e+07 25322 5.57064e+07 0 0.151865 0.98893 0.811358 1.12105e+08 0.00506025 2.46571e+07 1.35916e+07 2.50351e+07 335 2.50922e+07 2.09834e+07 0.00394945 2.48453e+07 49.7528 0.00305749 0.991197 0 50.3803 GTEX-OHPL-2626-SM-2AXUT 1 B1 Chronic inflammation, atrophy, fibrosis (severe) consistent with Hashimoto's thyroiditis 8.3 Thyroid Thyroid 0002046 99 1641 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPL-2626-SM-2HMJA 1 B1 Chronic inflammation, atrophy, fibrosis (severe) consistent with Hashimoto's thyroiditis 8.3 Thyroid Thyroid 0002046 99 1641 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.696009 109565 0.974072 0.701904 0.817907 23910 1 76 0.0032375 135 0 7.13049e+07 0.023635 239707 1.01588e+08 1.70004e+07 23936 3.50757e+07 0 0.156165 0.701904 0.574092 7.13049e+07 0.00998605 1.56401e+07 1.01788e+07 1.58374e+07 145 1.6086e+07 1.30347e+07 0.00658344 1.59499e+07 49.7876 0.0023596 0.707798 0 50.3133 GTEX-OHPL-2626-SM-DO3X3 1 B1 Chronic inflammation, atrophy, fibrosis (severe) consistent with Hashimoto's thyroiditis Thyroid Thyroid 0002046 99 1641 BP-61949 DNA Extraction from Paxgene-derived Lysate Plate Based 03/25/2015 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-OHPL-3026-SM-3MJGS 1 B1 Moderate calcified atherosclerosis, wide lumen 7 Blood Vessel Artery - Coronary 0001621 89 1649 BP-17823 RNA isolation_PAXgene Tissue miRNA 07/21/2011 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.983706 338094 0.975452 0.985875 0.860374 23283 1 76 0.00270457 381 0 1.20006e+08 0.0241487 533402 1.21726e+08 1.90153e+07 23309 5.96826e+07 0 0.115078 0.985875 0.848221 1.20006e+08 0.00485888 2.59251e+07 1.22499e+07 2.63773e+07 337 2.64112e+07 2.42026e+07 0.00377935 2.61416e+07 49.7435 0.004382 0.988043 0 50.4323 GTEX-OHPM-0003-SM-2BWYB B1 Blood Whole Blood 0013756 -105 BP-17791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/20/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828067_R02C01 GTEX-OHPM-0003-SM-2XK1K B1 Blood Whole Blood 0013756 -105 BP-17791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/20/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R01C02 GTEX-OHPM-0003-SM-4X5ZH B1 Blood Whole Blood 0013756 -105 BP-17791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/20/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OHPM-0003-SM-5JK4I B1 Blood Whole Blood 0013756 -105 BP-17791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/20/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OHPM-0006-SM-2AXV8 B1 7.9 Blood Whole Blood 0013756 -105 BP-17815 RNA isolation_PAXgene Blood RNA (Manual) 07/21/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPM-0006-SM-2HMKU B1 7.9 Blood Whole Blood 0013756 -105 BP-17815 RNA isolation_PAXgene Blood RNA (Manual) 07/21/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.872701 714139 0.954484 0.880101 0.790856 19093 1 76 0.00276565 117 0 8.86538e+07 0.0444303 275473 1.00731e+08 1.58294e+07 19104 4.37542e+07 0 0.163628 0.880101 0.696034 8.86538e+07 0.00957868 1.95681e+07 1.1088e+08 2.01393e+07 143 2.04974e+07 2.09566e+07 0.00614352 1.99379e+07 49.3081 0.00273473 0.887502 0 50.7192 GTEX-OHPM-0008-SM-4E3IP B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989394 717084 0.974864 0.992868 0.86923 20631 1 76 0.00224995 218 0 9.27098e+07 0.0248418 360981 9.33757e+07 1.05466e+07 20649 4.60932e+07 0 0.105634 0.992868 0.863031 9.27098e+07 0.00335842 2.07546e+07 1.77264e+07 2.08345e+07 212 2.0994e+07 2.4491e+07 0.00280225 2.09135e+07 49.904 0.0038659 0.996342 0 50.096 GTEX-OHPM-0126-SM-2QU3F 0 B1 Epidermis is ~2% of specimen thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 149 1649 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OHPM-0126-SM-2YUN9 0 B1 Epidermis is ~2% of specimen thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 149 1649 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.86605 118807 0.971005 0.868509 0.787912 23176 1 76 0.00224927 178 0 6.76253e+07 0.0287836 1.04371e+06 7.78637e+07 6.53273e+06 23201 3.34691e+07 0 0.183093 0.868509 0.684308 6.76253e+07 0.00368279 1.46926e+07 7.00137e+06 1.49924e+07 164 1.50119e+07 9.71864e+06 0.002964 1.48452e+07 49.7208 0.0134043 0.870967 0 50.5049 GTEX-OHPM-0226-SM-3LK61 0 B1 slight underfixation centrally 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 148 1629 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.966482 353085 0.974679 0.967262 0.817073 24365 1 76 0.00222166 285 0 1.05569e+08 0.0249487 546498 1.09142e+08 1.00882e+07 24403 5.24438e+07 0 0.157606 0.967262 0.790323 1.05569e+08 0.00349645 2.30865e+07 1.05889e+07 2.3404e+07 329 2.3429e+07 1.98224e+07 0.00285854 2.31507e+07 49.7013 0.00500723 0.968042 0 50.3414 GTEX-OHPM-0326-SM-2AXUU 0 B1 Moderate ischemic changes: contraction band necrosis, nuclear hypertrophy 7.3 Heart Heart - Left Ventricle 0006566 72 1603 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPM-0326-SM-2HMKT 0 B1 Moderate ischemic changes: contraction band necrosis, nuclear hypertrophy 7.3 Heart Heart - Left Ventricle 0006566 72 1603 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.203615 37794 0.981197 0.222864 0.85486 19077 1 76 0.00391125 81 0 4.42715e+07 0.0181596 1.51528e+06 1.98647e+08 7.18539e+07 19082 2.00577e+07 0 0.126336 0.222864 0.190518 4.42715e+07 0.0964659 8.91412e+06 7.26967e+06 9.08985e+06 98 1.07081e+07 6.59797e+06 0.0461915 1.05993e+07 49.7448 0.007628 0.242114 0 50.488 GTEX-OHPM-0326-SM-33HCA 0 B1 Moderate ischemic changes: contraction band necrosis, nuclear hypertrophy 7.3 Heart Heart - Left Ventricle 0006566 72 1603 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.334796 78211 0.980151 0.33709 0.859172 19779 1 76 0.00230335 99 0 4.48338e+07 0.0190087 1.52167e+06 1.33002e+08 1.61937e+07 19784 2.19215e+07 0 0.120979 0.33709 0.289618 4.48338e+07 0.00861037 9.87542e+06 5.92448e+06 1.00647e+07 117 1.01036e+07 5.74976e+06 0.0054354 1.01169e+07 50.0328 0.0114409 0.339384 0 50.4746 GTEX-OHPM-0426-SM-3TW8V 1 B1 minimal atherosclerosis. Vessel wall is ~75% of thickness 6.6 Blood Vessel Artery - Aorta 0001496 70 1600 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992429 401658 0.975859 0.994022 0.861431 22764 1 76 0.00245781 288 0 1.30991e+08 0.0237089 515265 1.31779e+08 1.78698e+07 22789 6.52539e+07 0 0.114429 0.994022 0.856281 1.30991e+08 0.00393549 2.82895e+07 1.29055e+07 2.85441e+07 311 2.85439e+07 2.56862e+07 0.00319547 2.84822e+07 49.9459 0.00391008 0.995614 0 50.224 GTEX-OHPM-0526-SM-2AXUY 1 B1 bronchial mucosal sloughing, early. No significant inflammation; clean specimen 7.8 Lung Lung 0008952 126 1651 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPM-0526-SM-2YUMJ 1 B1 bronchial mucosal sloughing, early. No significant inflammation; clean specimen 7.8 Lung Lung 0008952 126 1651 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.856832 93286 0.978531 0.858559 0.853502 22210 1 76 0.00206837 138 0 6.9158e+07 0.0210754 291452 8.05513e+07 7.29988e+06 22231 3.42752e+07 0 0.125028 0.858559 0.732782 6.9158e+07 0.00332123 1.5312e+07 5.18478e+06 1.56314e+07 162 1.56768e+07 1.40695e+07 0.00269354 1.53992e+07 49.5534 0.00361822 0.860286 0 50.516 GTEX-OHPM-0726-SM-3LK7A 0 B1 Adequate for study 8.4 Esophagus Esophagus - Muscularis 0004648 106 1668 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.987071 294574 0.978072 0.987775 0.87635 21685 1 76 0.0020923 284 0 1.03893e+08 0.0215406 1.07859e+06 1.05179e+08 8.8137e+06 21702 5.17028e+07 0 0.101721 0.987775 0.865637 1.03893e+08 0.00316859 2.2457e+07 1.00254e+07 2.27027e+07 325 2.26694e+07 2.02899e+07 0.00263006 2.25595e+07 49.8785 0.0102548 0.988478 0 50.272 GTEX-OHPM-1026-SM-3LK74 1 B1 90% parenchyma, 10% fat. Remarkably well-preserved; numerous islets of Langherhans noted. 7 Pancreas Pancreas 0001150 85 1583 BP-17841 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.969614 384478 0.974483 0.970734 0.842608 22704 1 76 0.0024954 131 0 9.89693e+07 0.0252075 460754 1.01953e+08 9.50454e+06 22730 4.92369e+07 0 0.131874 0.970734 0.817948 9.89693e+07 0.00374722 2.27205e+07 3.50328e+07 2.29879e+07 159 2.29623e+07 2.82502e+07 0.00312059 2.28745e+07 49.9042 0.00451927 0.971853 0 50.2926 GTEX-OHPM-1426-SM-3TW8Y 1 B1 superficial sloughing. Mucosa is ~20-23% specimen thickness 7.4 Colon Colon - Transverse 0001157 115 1660 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992039 270250 0.973552 0.993573 0.832239 24340 1 76 0.00266112 291 0 1.15006e+08 0.025819 1.91845e+06 1.1575e+08 1.51704e+07 24372 5.72906e+07 0 0.141313 0.993573 0.82689 1.15006e+08 0.00403484 2.54463e+07 1.77492e+07 2.55496e+07 303 2.55294e+07 1.79161e+07 0.00334692 2.56257e+07 50.0941 0.0165741 0.995107 0 50.1013 GTEX-OHPM-1526-SM-EV796 1 B1 1, in some areas 0. Extremely well-preserved mucosa-25-30% of specimen thickness 5.5 Stomach Stomach 0000945 110 1665 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-10740 05/07/2017 TruSeq.v1 RNASEQ 0.983116 241143 0.983132 0.98451 0.867648 22971 1 76 0.00254454 334 0 9.9678e+07 0.0164441 1.90698e+06 1.01246e+08 1.12094e+07 22992 4.96395e+07 0 0.115484 0.98451 0.854208 9.9678e+07 0.00398536 2.27603e+07 6.95539e+07 2.31731e+07 311 2.31489e+07 2.26548e+07 0.00326393 2.29129e+07 49.7438 0.018835 0.985904 0 50.4493 GTEX-OHPM-1626-SM-2AXUZ 1 B1 less than 1% intermingled adipose tissue 8.5 Muscle Muscle - Skeletal 0011907 155 1624 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPM-1626-SM-2HMK4 1 B1 less than 1% intermingled adipose tissue 8.5 Muscle Muscle - Skeletal 0011907 155 1624 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.483827 126040 0.983235 0.492582 0.886816 21225 1 76 0.00359671 169 0 9.55575e+07 0.0164806 1.86381e+06 1.93993e+08 6.07628e+07 21233 4.67025e+07 0 0.0964187 0.492582 0.436829 9.55575e+07 0.0272469 2.04289e+07 1.47291e+07 2.07875e+07 166 2.1533e+07 1.95939e+07 0.0152116 2.11897e+07 49.5982 0.0096076 0.501337 0 50.435 GTEX-OHPM-1826-SM-2QU3Z 0 B1 Prominent atherosclerotic narrowing (~40%). Vessel is central 75% of specimen; peripheral fat/connective tissue 8.4 Blood Vessel Artery - Tibial 0007610 152 1625 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OHPM-1826-SM-2YUNF 0 B1 Prominent atherosclerotic narrowing (~40%). Vessel is central 75% of specimen; peripheral fat/connective tissue 8.4 Blood Vessel Artery - Tibial 0007610 152 1625 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.848727 89926 0.97721 0.850084 0.839157 21548 1 76 0.00209979 152 0 7.15989e+07 0.0222726 407059 8.42256e+07 8.21487e+06 21567 3.54882e+07 0 0.138054 0.850084 0.713354 7.15989e+07 0.00346906 1.5413e+07 5.0396e+06 1.57437e+07 164 1.57728e+07 1.4098e+07 0.00278333 1.5487e+07 49.5428 0.00483296 0.851441 0 50.5308 GTEX-OHPM-2126-SM-3LK75 1 B1 good clean specimen; all parenchyma 6.5 Testis Testis 0000473 123 1653 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.976069 1.71861e+06 0.845317 0.977029 0.623217 33201 1 76 0.00234693 161 0 9.41328e+07 0.15412 1.16358e+06 9.6346e+07 8.05355e+06 33268 4.68035e+07 0 0.2221 0.977029 0.608901 9.41328e+07 0.0036192 1.7704e+07 9.78607e+07 1.82695e+07 164 1.83375e+07 1.28786e+07 0.00298244 1.77531e+07 49.1904 0.012077 0.977989 0 50.7861 GTEX-OHPM-2626-SM-2AXUV 1 B1 Reasonably well preserved for endocrine organ 7.3 Thyroid Thyroid 0002046 76 1594 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPM-2626-SM-2HMJL 1 B1 Reasonably well preserved for endocrine organ 7.3 Thyroid Thyroid 0002046 76 1594 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.372485 73761 0.969275 0.388227 0.805341 23170 1 76 0.0035351 110 0 6.35415e+07 0.0303248 554089 1.63671e+08 4.87392e+07 23186 3.03129e+07 0 0.163934 0.388227 0.312655 6.35415e+07 0.0639576 1.32577e+07 7.91163e+06 1.36681e+07 116 1.47792e+07 1.08367e+07 0.0325213 1.4451e+07 49.4387 0.00338539 0.40397 0 50.7622 GTEX-OHPM-2626-SM-33HC5 1 B1 Reasonably well preserved for endocrine organ 7.3 Thyroid Thyroid 0002046 76 1594 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.972849 884263 0.96942 0.976863 0.793691 25135 1 76 0.00224613 377 0 1.4802e+08 0.0302268 1.03015e+06 1.51526e+08 1.35657e+07 25193 7.3382e+07 0 0.175729 0.976863 0.775327 1.4802e+08 0.00683255 3.24334e+07 1.28928e+07 3.27381e+07 393 3.28433e+07 2.51643e+07 0.00452991 3.28941e+07 50.0386 0.00679854 0.980877 0 50.2338 GTEX-OHPM-2626-SM-5SI7I 1 B1 Reasonably well preserved for endocrine organ 7.3 Thyroid Thyroid 0002046 76 1594 BP-17842 RNA isolation_PAXgene Tissue miRNA 07/22/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990271 227629 0.969964 0.993351 0.809401 21845 1 76 0.00188844 120 0 5.25379e+07 0.0297466 309458 5.28896e+07 4.99907e+06 21861 2.61204e+07 0 0.160563 0.993351 0.804019 5.25379e+07 0.00322662 1.15542e+07 5.27034e+06 1.15903e+07 128 1.15966e+07 9.42868e+06 0.00255545 1.17036e+07 50.2296 0.00585102 0.996432 0 50.0779 GTEX-OHPN-0004-SM-2BWYH C1 Blood Whole Blood 0013756 346 BP-17838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/22/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828067_R03C01 GTEX-OHPN-0004-SM-2XJZT C1 Blood Whole Blood 0013756 346 BP-17838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/22/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R01C01 GTEX-OHPN-0004-SM-4X5ZI C1 Blood Whole Blood 0013756 346 BP-17838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/22/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OHPN-0004-SM-5JK2V C1 Blood Whole Blood 0013756 346 BP-17838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/22/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OHPN-0005-SM-2AXVX C1 7.2 Blood Whole Blood 0013756 BP-17872 RNA isolation_PAXgene Blood RNA (Manual) 07/25/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPN-0005-SM-2YUML C1 7.2 Blood Whole Blood 0013756 BP-17872 RNA isolation_PAXgene Blood RNA (Manual) 07/25/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.65929 576187 0.948152 0.660362 0.782076 19543 1 76 0.00226254 105 0 6.6498e+07 0.0512816 204832 1.00699e+08 1.1026e+07 19549 3.28386e+07 0 0.166076 0.660362 0.516453 6.6498e+07 0.00435494 1.46969e+07 8.73732e+07 1.52599e+07 117 1.53079e+07 1.62585e+07 0.00330704 1.47586e+07 49.0865 0.0020341 0.661435 0 50.9397 GTEX-OHPN-0008-SM-4E3HW C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990059 900795 0.971018 0.992991 0.867749 21130 1 76 0.00231777 282 0 1.03295e+08 0.0286728 573441 1.04025e+08 1.14358e+07 21146 5.13774e+07 0 0.103268 0.992991 0.861667 1.03295e+08 0.00345301 2.28188e+07 2.35625e+07 2.29626e+07 272 2.30871e+07 2.62909e+07 0.00288371 2.29973e+07 49.9025 0.00551255 0.995923 0 50.1571 GTEX-OHPN-0011-R10A-SM-2I5FL C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 EXCLUDE 0.199347 659736 0.903138 0.223142 0.766322 20506 1 76 0.00706971 91 0 4.12804e+07 0.0963317 5.42958e+06 1.84996e+08 1.37501e+08 20511 1.81742e+07 0 0.136816 0.223142 0.170998 4.12804e+07 0.0777239 7.35888e+06 4.92037e+07 8.02437e+06 115 9.66864e+06 2.60434e+06 0.0386297 9.24607e+06 48.883 0.0293496 0.246936 0 52.163 GTEX-OHPN-0011-R10A-SM-2IZJA C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R10A-SM-33HBU C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.650685 255486 0.972877 0.655129 0.860954 23406 1 76 0.00273397 368 0 8.79194e+07 0.0268968 1.19455e+07 1.34202e+08 1.57557e+07 23418 4.34127e+07 0 0.111923 0.655129 0.564035 8.79194e+07 0.00747012 1.93738e+07 1.72946e+07 1.99462e+07 345 1.9896e+07 6.8964e+06 0.00508598 1.99295e+07 50.0421 0.0890118 0.659573 0 50.7279 GTEX-OHPN-0011-R10A-SM-5S2U3 C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.982836 436667 0.899302 0.985897 0.727829 28292 1 76 0.00244827 196 0 7.89759e+07 0.100526 8.2374e+06 8.01057e+07 7.94415e+06 28305 3.9239e+07 0 0.171473 0.985897 0.717564 7.89759e+07 0.00377989 1.6305e+07 1.87323e+07 1.6431e+07 226 1.62737e+07 5.61388e+06 0.00311201 1.66788e+07 50.6146 0.102832 0.988957 0 50.1924 GTEX-OHPN-0011-R11A-SM-2I5FM C1, A1 5.9 Brain Brain - Cerebellar Hemisphere 0002037 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.955381 1.40394e+06 0.908056 0.960805 0.724788 24744 1 76 0.00345392 265 0 1.09749e+08 0.0916421 8.43333e+06 1.14226e+08 2.25402e+07 24781 5.43915e+07 0 0.183268 0.960805 0.69638 1.09749e+08 0.0107033 2.22893e+07 8.21671e+07 2.31795e+07 296 2.30918e+07 6.8442e+06 0.00705815 2.27914e+07 49.6727 0.0738301 0.96623 0 50.979 GTEX-OHPN-0011-R11A-SM-2IZJB C1, A1 5.9 Brain Brain - Cerebellar Hemisphere 0002037 350 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R1A-SM-2I5GB C1, A1 6 Brain Brain - Hippocampus 0001954 350 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.852832 1.37233e+06 0.879228 0.858141 0.746674 21952 1 76 0.00352823 115 0 6.52646e+07 0.120499 9.36369e+06 7.60534e+07 1.58586e+07 21964 3.23034e+07 0 0.132554 0.858141 0.640752 6.52646e+07 0.0108119 1.27253e+07 7.73062e+07 1.37469e+07 146 1.35793e+07 2.93031e+06 0.00714752 1.31296e+07 49.1582 0.12312 0.86345 0 51.9296 GTEX-OHPN-0011-R1A-SM-2M49D C1, A1 6 Brain Brain - Hippocampus 0001954 350 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R2A-SM-2I5FB C1, A1 6 Brain Brain - Substantia nigra 0002038 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.861909 872963 0.932917 0.868463 0.800473 23162 1 76 0.00331723 204 0 8.59069e+07 0.06686 9.55047e+06 9.89183e+07 1.86295e+07 23177 4.24923e+07 0 0.132444 0.868463 0.695181 8.59069e+07 0.0107916 1.79083e+07 5.21247e+07 1.88221e+07 226 1.87225e+07 6.39718e+06 0.00702621 1.8458e+07 49.6443 0.0965491 0.875016 0 51.244 GTEX-OHPN-0011-R2A-SM-2IZJ3 C1, A1 6 Brain Brain - Substantia nigra 0002038 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R3A-SM-2I5FC C1, A1 5.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 EXCLUDE 0.972906 2.61328e+06 0.879259 0.977788 0.74281 23359 1 76 0.00332881 267 0 1.08614e+08 0.120283 1.65626e+07 1.11082e+08 2.07333e+07 23379 5.39027e+07 0 0.136449 0.977788 0.726311 1.08614e+08 0.0102308 2.14212e+07 1.4462e+08 2.24464e+07 295 2.21429e+07 6.71998e+06 0.00676257 2.20545e+07 49.9 0.149103 0.98267 0 51.1686 GTEX-OHPN-0011-R3A-SM-2IZJ4 C1, A1 5.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R4A-SM-2I5FD C1, A1 5 Brain Brain - Amygdala 0001876 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.932434 1.45292e+06 0.919559 0.939145 0.791208 23287 1 76 0.00343305 268 0 1.01038e+08 0.080132 1.45698e+07 1.07585e+08 2.18474e+07 23304 5.00169e+07 0 0.128351 0.939145 0.743059 1.01038e+08 0.0106232 2.05473e+07 8.82336e+07 2.18615e+07 296 2.16533e+07 6.59121e+06 0.00700241 2.11912e+07 49.4607 0.135426 0.945856 0 51.5495 GTEX-OHPN-0011-R4A-SM-2IZJ5 C1, A1 5 Brain Brain - Amygdala 0001876 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R5A-SM-2I5FF C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.519479 1.18031e+06 0.917004 0.527491 0.764491 25639 1 76 0.00437997 121 0 8.58238e+07 0.0823579 5.60600e+06 1.62702e+08 6.07727e+07 25658 4.20093e+07 0 0.152513 0.527491 0.403262 8.58238e+07 0.0277656 1.73214e+07 6.53197e+07 1.81637e+07 146 1.85843e+07 8.19498e+06 0.0158952 1.79769e+07 49.1693 0.0344557 0.535503 0 51.1869 GTEX-OHPN-0011-R5A-SM-2IZJ6 C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R6A-SM-2I5FH C1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.913435 1.57658e+06 0.907073 0.91952 0.725145 26064 1 76 0.00347761 196 0 9.72016e+07 0.0925848 8.13365e+06 1.05709e+08 2.03645e+07 26097 4.81154e+07 0 0.181928 0.91952 0.666785 9.72016e+07 0.0105981 1.95191e+07 8.19518e+07 2.06439e+07 241 2.06505e+07 7.69861e+06 0.00701429 1.9961e+07 49.151 0.0769437 0.925605 0 51.4004 GTEX-OHPN-0011-R6A-SM-2IZJ7 C1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R7A-SM-2I5FI C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.724799 672300 0.933046 0.729785 0.796494 23187 1 76 0.00351907 116 0 6.56821e+07 0.0666258 7.11709e+06 9.00019e+07 1.93513e+07 23200 3.24486e+07 0 0.136551 0.729785 0.58127 6.56821e+07 0.0114515 1.35112e+07 4.07989e+07 1.43699e+07 144 1.43241e+07 4.9e+06 0.00745816 1.38436e+07 49.147 0.0790771 0.734772 0 51.5398 GTEX-OHPN-0011-R7A-SM-2IZJ8 C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R8A-SM-2I5FJ C1, A1 5.4 Brain Brain - Hypothalamus 0001898 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.151684 597849 0.89527 0.169541 0.74572 19622 1 76 0.00703499 84 0 3.28755e+07 0.104278 3.10856e+06 1.93909e+08 1.7002e+08 19626 1.45576e+07 0 0.14955 0.169541 0.12643 3.28755e+07 0.0765947 5.93855e+06 4.29589e+07 6.20562e+06 103 7.49335e+06 2.14222e+06 0.0381515 7.41372e+06 49.7329 0.0160311 0.187399 0 51.0996 GTEX-OHPN-0011-R8A-SM-2IZJ9 C1, A1 5.4 Brain Brain - Hypothalamus 0001898 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R8A-SM-33HBT C1, A1 5.4 Brain Brain - Hypothalamus 0001898 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.968169 441961 0.974204 0.971813 0.847737 24242 1 76 0.00263793 516 0 1.52012e+08 0.0255792 1.47736e+07 1.56421e+08 1.39382e+07 24280 7.53672e+07 0 0.126467 0.971813 0.823842 1.52012e+08 0.006941 3.34892e+07 2.34879e+07 3.4899e+07 552 3.45494e+07 1.20797e+07 0.00478139 3.42971e+07 49.8168 0.0944475 0.975458 0 51.0307 GTEX-OHPN-0011-R9A-SM-2IZJL C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-0011-R9A-SM-2YUMN C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.890214 226291 0.962118 0.892127 0.813433 23774 1 76 0.00243852 217 0 8.01167e+07 0.0375801 3.21196e+06 8.98042e+07 7.38344e+06 23799 3.9713e+07 0 0.148686 0.892127 0.725686 8.01167e+07 0.00366497 1.76068e+07 1.21226e+07 1.81294e+07 240 1.81104e+07 1.08085e+07 0.00305043 1.77829e+07 49.5438 0.0357663 0.89404 0 50.7312 GTEX-OHPN-0011-R9A-SM-4DXUH C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-3206 06/04/2013 TruSeq.v1 EXCLUDE 0.983259 589458 0.959951 0.987348 0.810079 24029 1 76 0.00254756 214 0 7.85089e+07 0.0397604 2.95345e+06 7.95149e+07 7.60918e+06 24056 3.89705e+07 0 0.149872 0.987348 0.79983 7.85089e+07 0.00348226 1.73323e+07 1.40207e+07 1.74904e+07 217 1.75157e+07 1.03972e+07 0.00301298 1.76213e+07 50.1503 0.0371434 0.991437 0 50.2269 GTEX-OHPN-0011-R9A-SM-5TDEJ C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 350 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-5048 04/03/2014 TruSeq.v1 RNASEQ 0.987354 466087 0.959316 0.989978 0.806773 24016 1 76 0.00255932 211 0 8.12227e+07 0.0404151 3.10166e+06 8.2045e+07 9.24871e+06 24041 4.03655e+07 0 0.152542 0.989978 0.798688 8.12227e+07 0.00433899 1.79092e+07 1.53830e+07 1.8093e+07 231 1.79819e+07 1.02585e+07 0.0034468 1.82237e+07 50.3339 0.0378044 0.992602 0 50.2551 GTEX-OHPN-0226-SM-48TBV 1 C1 Poor fixation centrally. Specimen averages 10mm x 5-7mm 7 Adipose Tissue Adipose - Subcutaneous 0002190 397 256 BP-17888 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991196 248211 0.976139 0.993146 0.795611 21881 1 76 0.00193977 126 0 5.7588e+07 0.0235546 297783 5.79854e+07 2.80457e+06 21902 2.86599e+07 0 0.180527 0.993146 0.790158 5.7588e+07 0.00263326 1.28651e+07 5.11985e+06 1.29036e+07 140 1.29552e+07 9.50348e+06 0.00228583 1.29218e+07 49.9356 0.00513548 0.995097 0 50.0747 GTEX-OHPN-0426-SM-E9TI6 1 C1 2 x 3mm clean specimen; no atherosclerosis 5.5 Blood Vessel Artery - Coronary 0001621 440 248 BP-17888 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983089 383082 0.970278 0.984901 0.764864 23831 1 76 0.00224935 149 0 7.35949e+07 0.0294258 308009 7.47232e+07 3.08298e+06 23859 3.66027e+07 0 0.205413 0.984901 0.753315 7.35949e+07 0.00292017 1.60182e+07 6.34332e+06 1.61342e+07 166 1.61297e+07 1.20403e+07 0.00258414 1.61524e+07 50.0352 0.004122 0.986712 0 50.1804 GTEX-OHPN-1026-SM-E9TI8 1 C1 Mucosa present; approximately 7-9% total specimen thickness 5.7 Esophagus Esophagus - Mucosa 0006920 452 246 BP-17888 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.985233 365199 0.970679 0.987053 0.781088 24020 1 76 0.00215319 202 0 8.67747e+07 0.0291361 547637 8.79129e+07 3.58603e+06 24049 4.31941e+07 0 0.189592 0.987053 0.770975 8.67747e+07 0.00278698 1.93166e+07 8.74856e+06 1.94535e+07 216 1.94381e+07 1.36885e+07 0.0024695 1.94866e+07 50.0623 0.00622931 0.988872 0 50.1765 GTEX-OHPN-1926-SM-E9TI9 2 C1 (glands/stroma); 1 (myometrium. A 0.8 x 2.8mm glandular focus on one pole of a 10x 4mm aliquot 5.5 Uterus Uterus 0000995 477 241 BP-17889 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.986093 481868 0.967061 0.987954 0.757483 24498 1 76 0.00215861 205 0 9.06307e+07 0.032712 342913 9.17358e+07 3.63562e+06 24540 4.50988e+07 0 0.209578 0.987954 0.748358 9.06307e+07 0.00289179 1.97355e+07 8.26892e+06 1.98902e+07 213 1.98875e+07 1.44401e+07 0.00252451 1.99009e+07 50.0168 0.00373805 0.989814 0 50.1952 GTEX-OHPN-2026-SM-E9TIA 3 C1 Mucosa is ~15--30% of specimen thickness where present; 40-50% is sloughed 5.9 Colon Colon - Transverse 0001157 479 241 BP-17889 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.983828 387306 0.973764 0.985858 0.792677 24318 1 76 0.00231199 241 0 7.57291e+07 0.025836 687630 7.68155e+07 3.28153e+06 24346 3.76519e+07 0 0.181088 0.985858 0.781467 7.57291e+07 0.00308192 1.69498e+07 2.34502e+07 1.70563e+07 203 1.70812e+07 1.32726e+07 0.00269616 1.70784e+07 49.996 0.00895171 0.987889 0 50.1566 GTEX-OHPN-2226-SM-E9TI7 1 C1 Epithelium is present, beginning to slough 5.5 Cervix Uteri Cervix - Endocervix 0000458 484 241 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.980722 400644 0.969663 0.982429 0.736318 23891 1 76 0.00235135 157 0 7.91399e+07 0.0300485 271943 8.05553e+07 3.48722e+06 23930 3.93584e+07 0 0.233345 0.982429 0.72338 7.91399e+07 0.00286601 1.73145e+07 7.83467e+06 1.74546e+07 170 1.7437e+07 1.28208e+07 0.00260823 1.7465e+07 50.0401 0.00337585 0.984136 0 50.2015 GTEX-OHPN-2426-SM-E9TI5 1 C1 Largely denuded epithelium less than 0.1% of total thickness 5.7 Vagina Vagina 0000996 487 242 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.984357 444248 0.969885 0.986339 0.739519 24230 1 76 0.0023244 139 0 6.89364e+07 0.0298283 212955 6.98912e+07 3.13344e+06 24262 3.42752e+07 0 0.230366 0.986339 0.729417 6.89364e+07 0.00293441 1.51959e+07 6.5333e+06 1.52913e+07 150 1.53186e+07 1.13044e+07 0.00262879 1.53029e+07 49.9745 0.00304695 0.98832 0 50.1564 GTEX-OHPN-2526-SM-2I5H3 1 C1 Fragment of meninges present in block 6.8 Brain Brain - Cortex 0001870 506 243 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.891758 448763 0.965075 0.89758 0.821803 25237 1 76 0.00313193 270 0 1.05501e+08 0.0346579 7.34814e+06 1.17539e+08 2.16142e+07 25261 5.22338e+07 0 0.143271 0.89758 0.737634 1.05501e+08 0.0102407 2.28462e+07 2.56145e+07 2.34708e+07 290 2.35297e+07 1.12866e+07 0.00666324 2.3302e+07 49.7568 0.0625165 0.903402 0 50.6742 GTEX-OHPN-2526-SM-2IZJH 1 C1 Fragment of meninges present in block 6.8 Brain Brain - Cortex 0001870 506 243 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-2626-SM-2I5H1 2 C1 2(granular layer) 1 (cortex) 6.3 Brain Brain - Cerebellum 0002037 507 244 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.953413 462107 0.946472 0.959954 0.759574 25444 1 76 0.00336304 267 0 1.13396e+08 0.0533166 6.71945e+06 1.18127e+08 2.2842e+07 25481 5.6132e+07 0 0.186898 0.959954 0.729155 1.13396e+08 0.010321 2.41883e+07 2.99173e+07 2.45876e+07 297 2.46443e+07 8.34974e+06 0.0068183 2.46905e+07 50.0468 0.0568835 0.966494 0 50.4093 GTEX-OHPN-2626-SM-2IZJG 2 C1 2(granular layer) 1 (cortex) 6.3 Brain Brain - Cerebellum 0002037 507 244 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OHPN-2726-SM-2AXWJ 0 C1 Appear atrophic; 50% adipose 7 Muscle Muscle - Skeletal 0011907 510 242 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OHPN-2726-SM-2I5H4 0 C1 Appear atrophic; 50% adipose 7 Muscle Muscle - Skeletal 0011907 510 242 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.9617 282253 0.968222 0.966838 0.818626 24692 1 76 0.00300356 276 0 1.41932e+08 0.031553 1.69637e+06 1.468e+08 2.88398e+07 24725 7.0399e+07 0 0.149595 0.966838 0.791479 1.41932e+08 0.0100952 3.04431e+07 2.35902e+07 3.08503e+07 309 3.09539e+07 2.13878e+07 0.00653056 3.09228e+07 49.9748 0.0115556 0.971976 0 50.3321 GTEX-OHPN-2826-SM-3LK67 0 C1 1 x 2mm nodule of fat attached to 2.6 x 2.8mm vessel 6.4 Blood Vessel Artery - Tibial 0007610 512 242 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.985655 296244 0.971691 0.98628 0.806669 23816 1 76 0.00244831 278 0 9.76393e+07 0.0279249 413573 9.89975e+07 9.38431e+06 23842 4.85045e+07 0 0.165023 0.98628 0.795601 9.76393e+07 0.00350874 2.12386e+07 1.06312e+07 2.14167e+07 272 2.14229e+07 1.72182e+07 0.00297819 2.12977e+07 49.8534 0.00417761 0.986905 0 50.2088 GTEX-OHPN-2926-SM-3LK65 1 C1 Nerve is approximately 80% of specimen; 20 is adipose (along one pole) 6.2 Nerve Nerve - Tibial 0001323 514 241 BP-17890 RNA isolation_PAXgene Tissue miRNA 07/26/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.974903 203240 0.966045 0.9755 0.757558 24628 1 76 0.00260683 160 0 7.45963e+07 0.0336392 317595 7.64698e+07 7.47509e+06 24663 3.7051e+07 0 0.208487 0.9755 0.738997 7.45963e+07 0.00363317 1.63468e+07 8.49078e+06 1.64753e+07 168 1.64892e+07 1.12698e+07 0.00311969 1.63799e+07 49.8338 0.00415321 0.976096 0 50.1958 GTEX-OIZF-0004-SM-2BWYY B1 Blood Whole Blood 0013756 -34 BP-18058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293764036_R02C01 GTEX-OIZF-0004-SM-2XK1H B1 Blood Whole Blood 0013756 -34 BP-18058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R01C02 GTEX-OIZF-0004-SM-3USRU B1 Blood Whole Blood 0013756 -34 BP-18058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OIZF-0004-SM-5JK4C B1 Blood Whole Blood 0013756 -34 BP-18058 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/04/2011 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OIZF-0006-SM-2AXUB B1 7.6 Blood Whole Blood 0013756 -34 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-0006-SM-2I5GQ B1 7.6 Blood Whole Blood 0013756 -34 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.947774 1.16978e+06 0.938296 0.954058 0.77472 21680 1 76 0.00355579 168 0 1.09043e+08 0.0610534 498073 1.14293e+08 2.36811e+07 21708 5.39796e+07 0 0.163576 0.954058 0.739128 1.09043e+08 0.0109643 2.31809e+07 7.01996e+07 2.34662e+07 199 2.37365e+07 2.07826e+07 0.00723563 2.35681e+07 49.8221 0.00435784 0.960343 0 50.3058 GTEX-OIZF-0126-SM-7SB8I 0 B1 Epidermis is 3% of aliquot thickness 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 215 256 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 RNASEQ 0.989177 287348 0.960626 0.992165 0.633486 25540 1 76 0.00279517 144 0 7.17974e+07 0.0391442 305050 7.23644e+07 8.12914e+06 25598 3.56887e+07 0 0.32714 0.992165 0.628523 7.17974e+07 0.00436514 1.55936e+07 9.21617e+06 1.574e+07 132 1.58119e+07 9.78915e+06 0.00357779 1.57309e+07 49.8715 0.00421547 0.995152 0 50.2336 GTEX-OIZF-0226-SM-E9TI3 1 B1 Oversized (17mm) aliquot with central portion unfixed. Thin outer rim preserved 5.5 Adipose Tissue Adipose - Subcutaneous 0002190 221 250 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.980853 388401 0.975645 0.982556 0.802932 22654 1 76 0.00210182 167 0 7.40529e+07 0.0240244 475427 7.53676e+07 3.43547e+06 22677 3.68386e+07 0 0.172713 0.982556 0.788925 7.40529e+07 0.0026779 1.62726e+07 6.79469e+06 1.64021e+07 179 1.63749e+07 1.26895e+07 0.00238936 1.6424e+07 50.0748 0.00630811 0.98426 0 50.1981 GTEX-OIZF-0326-SM-3MJGY 0 B1 Well preserved myocardium 8.2 Heart Heart - Left Ventricle 0006566 121 350 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.989398 332751 0.982903 0.991532 0.85874 22099 1 76 0.00253323 373 0 1.18568e+08 0.0168269 2.20993e+06 1.19581e+08 1.79761e+07 22118 5.90241e+07 0 0.124163 0.991532 0.851468 1.18568e+08 0.0045952 2.57029e+07 2.16303e+07 2.67616e+07 332 2.65897e+07 1.97153e+07 0.003562 2.60559e+07 49.493 0.0184806 0.993665 0 51.009 GTEX-OIZF-0426-SM-2AXUM 0 B1 3 pieces: 11x1.8 mm. 7.1 Blood Vessel Artery - Aorta 0001496 124 347 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-0426-SM-7PBZP 0 B1 3 pieces: 11x1.8 mm. 6.1 Blood Vessel Artery - Aorta 0001496 124 347 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761,LCSET-7211 05/15/2015 TruSeq.v1 RNASEQ 0.98969 244507 0.971506 0.99273 0.81793 24833 1 76 0.0025579 382 0 1.57094e+08 0.028156 488744 1.58244e+08 1.87361e+07 24879 7.813e+07 0 0.153576 0.99273 0.811984 1.57094e+08 0.00421088 3.35162e+07 1.23313e+07 3.38288e+07 382 3.38626e+07 2.68935e+07 0.00338186 3.39294e+07 50.0493 0.00308854 0.995771 0 50.2321 GTEX-OIZF-0526-SM-7MXVM 1 B1 Alveolar cellular exudates, possible ventilator damage 6.8 Lung Lung 0008952 132 339 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6757 03/27/2015 TruSeq.v1 RNASEQ 0.976236 124634 0.967592 0.985912 0.770566 25147 1 76 0.00310467 139 0 7.27138e+07 0.0320449 300456 7.37528e+07 1.18254e+07 25177 3.59213e+07 0 0.197027 0.985912 0.75971 7.27138e+07 0.00436689 1.58198e+07 7.49525e+06 1.59313e+07 160 1.61916e+07 1.13457e+07 0.00372959 1.62167e+07 50.0388 0.00407383 0.995589 0 50.1756 GTEX-OIZF-0626-SM-2AXUP 1 B1 Epithelium is 10% of aliquot thickness 9.3 Esophagus Esophagus - Mucosa 0006920 171 300 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-0626-SM-2I5GT 1 B1 Epithelium is 10% of aliquot thickness 9.3 Esophagus Esophagus - Mucosa 0006920 171 300 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 EXCLUDE 0.456256 140899 0.974788 0.462369 0.813253 24214 1 76 0.00377771 154 0 8.8631e+07 0.0244088 342898 1.91689e+08 5.67368e+07 24241 4.3472e+07 0 0.161535 0.462369 0.376023 8.8631e+07 0.0288696 1.94854e+07 1.46007e+07 1.98642e+07 140 2.03817e+07 1.7925e+07 0.0161578 2.00813e+07 49.6288 0.00178883 0.468481 0 50.4813 GTEX-OIZF-0626-SM-7MKHG 1 B1 Epithelium is 10% of aliquot thickness 9.3 Esophagus Esophagus - Mucosa 0006920 171 300 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.988575 239883 0.977757 0.992019 0.832299 23016 1 76 0.00343944 211 0 8.24017e+07 0.0217948 285735 8.30647e+07 1.04082e+07 23034 4.09457e+07 0 0.145458 0.992019 0.825656 8.24017e+07 0.00448603 1.84104e+07 1.13219e+07 1.85904e+07 203 1.87274e+07 1.78004e+07 0.00396092 1.85475e+07 49.7588 0.00343991 0.995462 0 50.2433 GTEX-OIZF-0726-SM-7PC15 1 B1 3 pieces: 13x3 mm. 8.1 Esophagus Esophagus - Muscularis 0004648 173 298 BP-58308 RNA Extraction from Paxgene-derived Lysate Plate Based 11/21/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989364 213349 0.975614 0.992845 0.840846 23240 1 76 0.00268593 284 0 1.05422e+08 0.0240583 500389 1.06182e+08 1.43714e+07 23264 5.24146e+07 0 0.134768 0.992845 0.83483 1.05422e+08 0.00463673 2.248e+07 8.62964e+06 2.2709e+07 290 2.27886e+07 1.99272e+07 0.00365791 2.2736e+07 49.9422 0.00471256 0.996327 0 50.2534 GTEX-OIZF-0826-SM-3MJGO 0 B1 50-60% macrovesicular steatosis 8.3 Liver Liver 0001114 101 370 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.788255 274609 0.977198 0.789677 0.8416 22609 1 76 0.0026279 202 0 9.48095e+07 0.0224252 396479 1.20061e+08 1.94928e+07 22631 4.70232e+07 0 0.135598 0.789677 0.664593 9.48095e+07 0.00531561 2.03387e+07 1.34613e+07 2.07875e+07 217 2.07724e+07 2.1311e+07 0.00396934 2.05022e+07 49.6728 0.00330231 0.791099 0 50.5456 GTEX-OIZF-0926-SM-7MKH7 1 B1 12x10 mm. 7.8 Spleen Spleen 0002106 93 378 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6756 03/23/2015 TruSeq.v1 RNASEQ 0.985742 278866 0.963232 0.989964 0.764058 24767 1 76 0.00417417 138 0 7.83199e+07 0.035842 377763 7.91139e+07 1.04225e+07 24803 3.88365e+07 0 0.199174 0.989964 0.756389 7.83199e+07 0.00536342 1.70485e+07 9.46682e+06 1.7308e+07 161 1.74651e+07 1.29587e+07 0.00476626 1.72061e+07 49.6265 0.00477493 0.994186 0 50.3776 GTEX-OIZF-1026-SM-2AXUK 1 B1 Well preserved pancreas with about 40% fat in aliquot 6.8 Pancreas Pancreas 0001150 97 374 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-1026-SM-2HML5 1 B1 Well preserved pancreas with about 40% fat in aliquot 6.8 Pancreas Pancreas 0001150 97 374 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.761098 209766 0.976127 0.767375 0.859428 22667 1 76 0.0026788 114 0 7.92952e+07 0.0236568 244349 1.03333e+08 1.63744e+07 22678 3.91444e+07 0 0.116699 0.767375 0.659504 7.92952e+07 0.00937016 1.77608e+07 1.83043e+07 1.81468e+07 137 1.84461e+07 2.10824e+07 0.00599711 1.80912e+07 49.5143 0.00236468 0.773653 0 50.5375 GTEX-OIZF-1026-SM-7P8QV 1 B1 Well preserved pancreas with about 40% fat in aliquot 7.5 Pancreas Pancreas 0001150 97 374 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 EXCLUDE 0.990016 771145 0.97257 0.992611 0.802945 26378 1 76 0.0028265 276 0 1.10771e+08 0.0271309 407485 1.11595e+08 1.47428e+07 26424 5.51007e+07 0 0.169625 0.992611 0.797013 1.10771e+08 0.00434781 2.43431e+07 1.04713e+07 2.46389e+07 296 2.4744e+07 1.94685e+07 0.00358516 2.45008e+07 49.7531 0.00365145 0.995207 0 50.302 GTEX-OIZF-1326-SM-3MJGU 1 B1 21x4 mm. Abundant well preserved cortex. 8.2 Adrenal Gland Adrenal Gland 0002369 91 380 BP-18081 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.866558 270840 0.975798 0.868457 0.837412 22803 1 76 0.00266517 270 0 9.21298e+07 0.0238348 923309 1.06084e+08 1.70833e+07 22828 4.57317e+07 0 0.138386 0.868457 0.727256 9.21298e+07 0.00539987 2.00837e+07 1.11159e+07 2.06805e+07 258 2.07038e+07 1.58996e+07 0.00402953 2.02317e+07 49.4234 0.00870353 0.870356 0 50.732 GTEX-OIZF-1326-SM-7SB8E 1 B1 21x4 mm. Abundant well preserved cortex. 6.9 Adrenal Gland Adrenal Gland 0002369 91 380 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6763 04/27/2015 TruSeq.v1 EXCLUDE 0.988429 289501 0.964202 0.991983 0.738979 25315 1 76 0.00255722 168 0 8.84358e+07 0.0355317 463302 8.91505e+07 1.02845e+07 25368 4.3949e+07 0 0.225223 0.991983 0.733054 8.84358e+07 0.00454826 1.91543e+07 9.69778e+06 1.93931e+07 193 1.94453e+07 1.36622e+07 0.00354917 1.94023e+07 49.9448 0.00519685 0.995537 0 50.3099 GTEX-OIZF-1426-SM-2AXUE 1 B1 Well preserved. Mucosa is 10% wall thickness 7.8 Colon Colon - Transverse 0001157 179 292 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-1426-SM-2HML2 1 B1 Well preserved. Mucosa is 10% wall thickness 7.8 Colon Colon - Transverse 0001157 179 292 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.877796 130802 0.972388 0.884441 0.809882 25248 1 76 0.00277311 213 0 9.33531e+07 0.0267785 1.11653e+06 1.0555e+08 1.53313e+07 25280 4.6142e+07 0 0.162506 0.884441 0.716293 9.33531e+07 0.00930902 2.04426e+07 1.17057e+07 2.08619e+07 249 2.10809e+07 1.48898e+07 0.00601651 2.08323e+07 49.7034 0.0105782 0.891087 0 50.5077 GTEX-OIZF-1526-SM-2AXUI 1 B1 Gastric body mucosa with little muscle and much mucosa 6.5 Stomach Stomach 0000945 187 284 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZF-1526-SM-2I5GR 1 B1 Gastric body mucosa with little muscle and much mucosa 6.5 Stomach Stomach 0000945 187 284 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.926312 192903 0.984354 0.932763 0.879887 22226 1 76 0.00310462 423 0 1.18827e+08 0.0140836 657669 1.27393e+08 2.65691e+07 22243 5.87761e+07 0 0.104466 0.932763 0.820726 1.18827e+08 0.010704 2.74931e+07 2.43031e+08 2.83052e+07 325 2.85614e+07 3.92036e+07 0.00687802 2.80555e+07 49.5533 0.00516254 0.939214 0 50.7277 GTEX-OIZF-1626-SM-2QU3W 0 B1 12x9 mm. 7.9 Muscle Muscle - Skeletal 0011907 222 249 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OIZF-1626-SM-2YUNE 0 B1 12x9 mm. 7.9 Muscle Muscle - Skeletal 0011907 222 249 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.889426 149693 0.980128 0.891745 0.877123 19409 1 76 0.00186489 158 0 7.47436e+07 0.0196484 775520 8.38173e+07 7.14074e+06 19416 3.70457e+07 0 0.103005 0.891745 0.78217 7.47436e+07 0.00340123 1.59225e+07 8.17355e+06 1.64144e+07 176 1.6456e+07 1.57988e+07 0.00263106 1.6052e+07 49.3786 0.0092525 0.894063 0 50.7606 GTEX-OIZF-1726-SM-7PC3H 0 B1 Nerve comprises 60% of tissue area; remainder is fibrofatty tissue 6.7 Nerve Nerve - Tibial 0001323 169 302 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.987328 495539 0.968049 0.990439 0.75674 25221 1 76 0.00338122 213 0 9.65245e+07 0.0316362 283143 9.74563e+07 1.54652e+07 25266 4.79155e+07 0 0.211309 0.990439 0.749505 9.65245e+07 0.00498878 2.11127e+07 9.32478e+06 2.12871e+07 210 2.14493e+07 1.60906e+07 0.00418248 2.12444e+07 49.76 0.00290533 0.99355 0 50.2056 GTEX-OIZF-1826-SM-2QU4O 0 B1 Minimal intimal thickening, small focal calcification, no surrounding fat 7.7 Blood Vessel Artery - Tibial 0007610 230 241 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OIZF-1826-SM-2YUNO 0 B1 Minimal intimal thickening, small focal calcification, no surrounding fat 7.7 Blood Vessel Artery - Tibial 0007610 230 241 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.817516 224488 0.973193 0.820802 0.861448 21023 1 76 0.00203538 170 0 7.66162e+07 0.026322 265549 9.33431e+07 8.67003e+06 21036 3.78404e+07 0 0.111745 0.820802 0.707078 7.66162e+07 0.00352125 1.6213e+07 9.01953e+06 1.65683e+07 179 1.6674e+07 1.61889e+07 0.00277534 1.63915e+07 49.5728 0.00284487 0.824087 0 50.5419 GTEX-OIZF-1926-SM-7PBZS 3 B1 Mucosa largely sloughed. Muscle has mild autolysis 7.1 Bladder Bladder 0001255 137 334 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6761 04/12/2015 TruSeq.v1 RNASEQ 0.989145 189737 0.977789 0.992704 0.840761 23537 1 76 0.0027266 278 0 1.18123e+08 0.0219195 567087 1.18991e+08 1.68502e+07 23566 5.87317e+07 0 0.137027 0.992704 0.834627 1.18123e+08 0.00447519 2.5485e+07 1.00488e+07 2.57891e+07 316 2.58694e+07 2.22752e+07 0.00359776 2.57931e+07 49.9262 0.0047658 0.996263 0 50.2966 GTEX-OIZF-2026-SM-3MJH1 1 B1 Mixed atrophy and hyperplasia 6.2 Prostate Prostate 0002367 148 323 BP-18080 RNA isolation_PAXgene Tissue miRNA 08/05/2011 TruSeq.v1 RNASEQ 0.981733 297250 0.965736 0.984025 0.780616 26372 1 76 0.00277343 275 0 1.16766e+08 0.033968 556566 1.18661e+08 1.79319e+07 26425 5.80601e+07 0 0.18512 0.984025 0.768146 1.16766e+08 0.00488952 2.52395e+07 1.31715e+07 2.57659e+07 325 2.57705e+07 1.67329e+07 0.00382901 2.5488e+07 49.7244 0.00469038 0.986318 0 50.5161 GTEX-OIZF-2126-SM-7P8R2 1 B1 13x8 mm. 7.1 Testis Testis 0000473 166 305 BP-58273 RNA Extraction from Paxgene-derived Lysate Plate Based 11/20/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.988938 425030 0.93247 0.990954 0.759651 33775 1 76 0.00277483 217 0 1.03134e+08 0.0671686 892398 1.04075e+08 1.50676e+07 33844 5.13491e+07 0 0.172819 0.990954 0.752779 1.03134e+08 0.00364007 2.14169e+07 1.55435e+07 2.16506e+07 249 2.17695e+07 1.89221e+07 0.00320657 2.14792e+07 49.6643 0.00857454 0.992969 0 50.2714 GTEX-OIZF-2626-SM-7P8QZ 1 B1 10x6 mm. 6.6 Thyroid Thyroid 0002046 111 360 BP-58243 RNA Extraction from Paxgene-derived Lysate Plate Based 11/19/2014 LCSET-6758 04/05/2015 TruSeq.v1 RNASEQ 0.991815 303951 0.967774 0.99338 0.784703 24755 1 76 0.00280783 277 0 1.07381e+08 0.0319418 664827 1.08096e+08 1.46295e+07 24800 5.35006e+07 0 0.183072 0.99338 0.779508 1.07381e+08 0.00345043 2.34152e+07 1.43234e+07 2.37756e+07 279 2.38405e+07 1.68556e+07 0.00312862 2.35061e+07 49.6468 0.00615032 0.994946 0 50.3819 GTEX-OIZF-3026-SM-7PC3D 0 B1 Moderate atherosclerosis, 50% lumen narrowed 7.6 Blood Vessel Artery - Coronary 0001621 118 353 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6762 04/10/2015 TruSeq.v1 RNASEQ 0.984348 416634 0.976869 0.987985 0.845895 23904 1 76 0.0031239 281 0 1.03191e+08 0.0226798 350302 1.04446e+08 1.56896e+07 23930 5.12422e+07 0 0.130974 0.987985 0.835731 1.03191e+08 0.00477117 2.22612e+07 8.66298e+06 2.24489e+07 278 2.26103e+07 2.13855e+07 0.00394451 2.2453e+07 49.8254 0.00335391 0.991622 0 50.2098 GTEX-OIZG-0003-SM-2BWYZ C1 Blood Whole Blood 0013756 597 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828062_R02C01 GTEX-OIZG-0003-SM-2XK2R C1 Blood Whole Blood 0013756 597 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R05C02 GTEX-OIZG-0003-SM-4X5ZK C1 Blood Whole Blood 0013756 597 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OIZG-0003-SM-5JK3W C1 Blood Whole Blood 0013756 597 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OIZG-0005-SM-2AXUC C1 8.1 Blood Whole Blood 0013756 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-0005-SM-2HMJC C1 8.1 Blood Whole Blood 0013756 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.609606 887132 0.949427 0.618986 0.75369 21647 1 76 0.0041623 112 0 9.65854e+07 0.0492184 301897 1.56038e+08 4.91208e+07 21665 4.72899e+07 0 0.195737 0.618986 0.466523 9.65854e+07 0.0259012 2.08729e+07 1.07542e+08 2.15586e+07 128 2.2189e+07 2.04591e+07 0.014867 2.1645e+07 49.3794 0.00193476 0.628366 0 50.808 GTEX-OIZG-0008-SM-4E3J2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990388 732719 0.97464 0.993271 0.870165 19970 1 76 0.00223953 169 0 7.97425e+07 0.0250444 293240 8.02827e+07 8.81875e+06 19990 3.96565e+07 0 0.104475 0.993271 0.86431 7.97425e+07 0.00338473 1.77872e+07 1.50241e+07 1.7898e+07 166 1.80242e+07 2.06489e+07 0.00281047 1.78899e+07 49.813 0.00365259 0.996154 0 50.1553 GTEX-OIZG-0126-SM-E9TI2 2 C1 12x5 mm 5.6 Testis Testis 0000473 653 1620 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.987889 790554 0.917955 0.98979 0.724003 33436 1 76 0.00207488 220 0 9.68232e+07 0.0817129 1.49085e+06 9.78219e+07 4.00953e+06 33504 4.81848e+07 0 0.193952 0.98979 0.716611 9.68232e+07 0.00249224 1.97125e+07 2.02185e+07 1.98994e+07 241 1.99879e+07 1.50661e+07 0.00228316 1.97792e+07 49.7376 0.0152404 0.991691 0 50.2358 GTEX-OIZG-0226-SM-2AXUG 1 C1 9x8mm 7 Thyroid Thyroid 0002046 712 240 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-0226-SM-2TC5L 1 C1 9x8mm 7 Thyroid Thyroid 0002046 712 240 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.758029 217262 0.957351 0.764432 0.764561 23443 1 76 0.00311843 102 0 5.82701e+07 0.0423223 415105 7.62267e+07 1.46093e+07 23468 2.87781e+07 0 0.192789 0.764432 0.584455 5.82701e+07 0.0169003 1.25387e+07 1.17745e+07 1.26321e+07 107 1.28127e+07 9.0287e+06 0.00995164 1.2798e+07 49.9713 0.00544566 0.770835 0 50.1856 GTEX-OIZG-0426-SM-3LK5W 1 C1 Endothelium partially sloughed 6.6 Blood Vessel Artery - Aorta 0001496 717 249 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.979575 295691 0.970983 0.980305 0.833882 23300 1 76 0.00228237 278 0 1.08662e+08 0.0286806 455986 1.10845e+08 1.07503e+07 23330 5.39999e+07 0 0.137101 0.980305 0.817458 1.08662e+08 0.00335699 2.3379e+07 1.11568e+07 2.36323e+07 326 2.3609e+07 1.94224e+07 0.00281928 2.34877e+07 49.8712 0.00411372 0.981035 0 50.2694 GTEX-OIZG-0526-SM-2AXUH 1 C1 Mild alveolar cellular exudates. 8.6x5.8mm aliquot 7.4 Lung Lung 0008952 720 249 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-0526-SM-2HMLF 1 C1 Mild alveolar cellular exudates. 8.6x5.8mm aliquot 7.4 Lung Lung 0008952 720 249 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.66541 114525 0.971123 0.67047 0.790457 23658 1 76 0.00276191 118 0 5.92976e+07 0.0285026 434363 8.84418e+07 1.40692e+07 23683 2.92571e+07 0 0.180667 0.67047 0.529978 5.92976e+07 0.00970033 1.2932e+07 5.69953e+06 1.32303e+07 127 1.33833e+07 9.18034e+06 0.00620494 1.31833e+07 49.6236 0.00491129 0.67553 0 50.57 GTEX-OIZG-0726-SM-2AXUL 0 C1 Epidermis is 3% of aliquot thickness 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 730 241 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-0726-SM-2I5GS 0 C1 Epidermis is 3% of aliquot thickness 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 730 241 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.386521 161093 0.963545 0.401389 0.832405 23744 1 76 0.00363869 118 0 6.96555e+07 0.035394 603235 1.73536e+08 5.96232e+07 23756 3.32501e+07 0 0.13114 0.401389 0.334118 6.96555e+07 0.0641706 1.43509e+07 1.41857e+07 1.48024e+07 118 1.58724e+07 1.13407e+07 0.0327835 1.56034e+07 49.5727 0.00347613 0.416257 0 50.7743 GTEX-OIZG-0726-SM-33HBL 0 C1 Epidermis is 3% of aliquot thickness 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 730 241 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.951029 316286 0.972606 0.954683 0.850989 25186 1 76 0.00240486 529 0 1.42064e+08 0.0270051 835718 1.48808e+08 1.56526e+07 25224 7.04006e+07 0 0.121617 0.954683 0.812425 1.42064e+08 0.00716532 3.08454e+07 1.76865e+07 3.13411e+07 479 3.12989e+07 2.43449e+07 0.00477598 3.14261e+07 50.1014 0.00561609 0.958338 0 50.3986 GTEX-OIZG-0826-SM-E9TI4 1 C1 7x9 mm. well fixed tissue 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 732 241 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.980931 346503 0.976185 0.982872 0.815403 22117 1 76 0.00207577 156 0 6.7468e+07 0.0234874 752250 6.86437e+07 2.80731e+06 22145 3.35556e+07 0 0.160783 0.982872 0.801437 6.7468e+07 0.00278681 1.48468e+07 6.48846e+06 1.49799e+07 171 1.49788e+07 1.11648e+07 0.00243059 1.49691e+07 49.9838 0.0109588 0.984814 0 50.2231 GTEX-OIZG-0926-SM-3LK5Y 0 C1 2 pieces, 9x4 mm 7.1 Esophagus Esophagus - Muscularis 0004648 736 240 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.977131 312428 0.970803 0.977967 0.809464 24477 1 76 0.00226236 379 0 1.0493e+08 0.0289219 777067 1.07294e+08 9.58789e+06 24516 5.2144e+07 0 0.161339 0.977967 0.791629 1.0493e+08 0.00338888 2.27943e+07 1.17777e+07 2.29532e+07 332 2.29377e+07 1.70722e+07 0.00282514 2.2897e+07 49.9557 0.00724239 0.978804 0 50.1737 GTEX-OIZG-1026-SM-3LK5X 0 C1 3 pieces up to 8x2 mm. Squamous hyperplasia. Large submucosal glands in one piece 8.6 Esophagus Esophagus - Mucosa 0006920 739 240 BP-18122 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.979965 240037 0.974208 0.980863 0.826041 22193 1 76 0.00235162 172 0 8.17516e+07 0.0253844 318418 8.33466e+07 8.04157e+06 22209 4.06556e+07 0 0.148167 0.980863 0.810233 8.17516e+07 0.0034356 1.8326e+07 1.29631e+07 1.84469e+07 188 1.84599e+07 1.6763e+07 0.00289311 1.83922e+07 49.9082 0.00382041 0.98176 0 50.1645 GTEX-OIZG-1126-SM-2AXUQ 0 C1 7.5x6mm aliquot 6.7 Heart Heart - Left Ventricle 0006566 741 240 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-1126-SM-2HMIU 0 C1 7.5x6mm aliquot 6.7 Heart Heart - Left Ventricle 0006566 741 240 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.911819 100140 0.983223 0.917897 0.849319 21314 1 76 0.00235809 263 0 8.45404e+07 0.0166412 3.14456e+06 9.21023e+07 1.32565e+07 21330 4.18581e+07 0 0.133904 0.917897 0.779587 8.45404e+07 0.00884315 1.83152e+07 1.77806e+07 1.89872e+07 289 1.89606e+07 8.52382e+06 0.00557915 1.87029e+07 49.6578 0.034142 0.923975 0 50.9007 GTEX-OIZG-1326-SM-2AXUO 1 C1 Moderate tissue fracture 7.8 Muscle Muscle - Skeletal 0011907 748 242 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZG-1326-SM-2HMIQ 1 C1 Moderate tissue fracture 7.8 Muscle Muscle - Skeletal 0011907 748 242 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.828363 123087 0.982309 0.834634 0.883461 20411 1 76 0.00234087 272 0 9.27386e+07 0.0174588 1.28237e+06 1.11113e+08 1.69294e+07 20420 4.58461e+07 0 0.0988487 0.834634 0.737366 9.27386e+07 0.00917902 2.00068e+07 9.94671e+06 2.03601e+07 259 2.06461e+07 1.87491e+07 0.00573425 2.03194e+07 49.6012 0.0115412 0.840905 0 50.4377 GTEX-OIZG-1426-SM-E6CHG 1 C1 About 10% fat 5.7 Nerve Nerve - Tibial 0001323 752 240 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993514 297999 0.969749 0.99458 0.775565 24634 1 76 0.00201386 289 0 9.40406e+07 0.0299358 318008 9.4553e+07 6.11307e+06 24677 4.68412e+07 0 0.194184 0.99458 0.771362 9.40406e+07 0.00253125 2.06420e+07 8.69555e+06 2.08382e+07 269 2.07433e+07 1.55914e+07 0.00227228 2.08283e+07 50.1023 0.00336328 0.995647 0 50.2364 GTEX-OIZG-1526-SM-2QU3R 0 C1 Minimal intimal thickening 6.6 Blood Vessel Artery - Tibial 0007610 754 240 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OIZG-1526-SM-2YUNG 0 C1 Minimal intimal thickening 6.6 Blood Vessel Artery - Tibial 0007610 754 240 BP-18123 RNA isolation_PAXgene Tissue miRNA 08/09/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.187016 28855 0.967884 0.184829 0.808995 17408 1 76 0.00222982 93 0 1.55275e+07 0.0316626 79762 8.40098e+07 1.12875e+07 17410 7.53638e+06 0 0.158889 0.184829 0.149526 1.55275e+07 0.00698338 3.31341e+06 1.87796e+06 3.42668e+06 99 3.33300e+06 2.84287e+06 0.00463472 3.23116e+06 49.2243 0.000949437 0.182642 0 50.8402 GTEX-OIZH-0003-SM-2BWZ6 B1 Blood Whole Blood 0013756 -96 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828062_R03C01 GTEX-OIZH-0003-SM-2XK32 B1 Blood Whole Blood 0013756 -96 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R02C02 GTEX-OIZH-0003-SM-3USSF B1 Blood Whole Blood 0013756 -96 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/05/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OIZH-0003-SM-5JK41 B1 Blood Whole Blood 0013756 -96 BP-18079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OIZH-0005-SM-2AXUD B1 8.5 Blood Whole Blood 0013756 -96 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-0005-SM-2HMJN B1 8.5 Blood Whole Blood 0013756 -96 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.70358 325243 0.967724 0.71106 0.816308 18137 1 76 0.00281047 85 0 6.23833e+07 0.0315813 262718 8.77329e+07 1.37114e+07 18142 3.06984e+07 0 0.151415 0.71106 0.580444 6.23833e+07 0.0103838 1.39287e+07 6.60185e+07 1.4298e+07 104 1.45857e+07 1.51466e+07 0.00655729 1.42878e+07 49.4842 0.00299452 0.71854 0 50.6541 GTEX-OIZH-0126-SM-2D44Z 0 B1 Epidermis is 3-5% of specimen thickness 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 219 294 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-0126-SM-2HMIS 0 B1 Epidermis is 3-5% of specimen thickness 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 219 294 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.945206 140823 0.975953 0.953257 0.867182 23270 1 76 0.00276023 233 0 8.57353e+07 0.0237909 483277 8.99393e+07 1.27148e+07 23289 4.2368e+07 0 0.108771 0.953257 0.826647 8.57353e+07 0.00905478 1.84895e+07 1.0792e+07 1.88196e+07 218 1.91081e+07 1.63691e+07 0.00588092 1.88639e+07 49.6784 0.00537337 0.961307 0 50.4424 GTEX-OIZH-0226-SM-2AXUJ 0 B1 Central 85% of specimen is unfixed and dropped out 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 224 289 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-0226-SM-2YUMH 0 B1 Central 85% of specimen is unfixed and dropped out 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 224 289 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.933181 134831 0.976677 0.938818 0.819723 22333 1 76 0.00220354 146 0 7.08197e+07 0.0229482 303307 7.54349e+07 6.17862e+06 22355 3.49625e+07 0 0.156955 0.938818 0.76957 7.08197e+07 0.0032612 1.54275e+07 6.39803e+06 1.57791e+07 162 1.59534e+07 1.29482e+07 0.00272919 1.56533e+07 49.5252 0.00402078 0.944456 0 50.5634 GTEX-OIZH-0326-SM-2AXUF 1 B1 Patchy ischemic changes. A number of central tears in specimen. 11x 6mm 7.6 Heart Heart - Left Ventricle 0006566 126 387 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-0326-SM-2HMKC 1 B1 Patchy ischemic changes. A number of central tears in specimen. 11x 6mm 7.6 Heart Heart - Left Ventricle 0006566 126 387 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.666006 69190 0.981278 0.670492 0.853528 20611 1 76 0.00268953 101 0 6.39831e+07 0.0184902 1.65806e+06 9.54271e+07 1.59527e+07 20623 3.16165e+07 0 0.12775 0.670492 0.572284 6.39831e+07 0.00983308 1.38874e+07 8.19455e+06 1.42835e+07 138 1.44018e+07 1.04699e+07 0.00623741 1.41062e+07 49.4815 0.0173752 0.674977 0 50.7031 GTEX-OIZH-0526-SM-2AXUN 1 B1 Mild emphysematous changes. 11.7 x 9.4 mm 8.1 Lung Lung 0008952 131 382 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTExDonor1-20_Sept2011 10/11/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-0526-SM-2HMKV 1 B1 Mild emphysematous changes. 11.7 x 9.4 mm 8.1 Lung Lung 0008952 131 382 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.965423 181976 0.973767 0.972145 0.829601 25694 1 76 0.0028124 280 0 1.16304e+08 0.025703 578720 1.19637e+08 1.63842e+07 25734 5.75639e+07 0 0.144166 0.972145 0.806493 1.16304e+08 0.00920126 2.55633e+07 1.11931e+07 2.5901e+07 296 2.62396e+07 2.22623e+07 0.00598474 2.59645e+07 49.7365 0.00483731 0.978868 0 50.3282 GTEX-OIZH-0626-SM-3NB1L 0 B1 Mucosa averages 20-25% thickness of specimen thickness0 9 Esophagus Esophagus - Mucosa 0006920 171 342 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985401 504877 0.974762 0.989656 0.833002 23444 1 76 0.00397998 222 0 1.14453e+08 0.024662 753198 1.15649e+08 1.89792e+07 23470 5.68023e+07 0 0.14176 0.989656 0.824386 1.14453e+08 0.00603307 2.56913e+07 2.16201e+07 2.58094e+07 253 2.5904e+07 2.38792e+07 0.00500211 2.60799e+07 50.1692 0.0065128 0.993911 0 50.1147 GTEX-OIZH-0726-SM-3NB1I 0 B1 Aliquots average 8 x 4mm 7.9 Esophagus Esophagus - Muscularis 0004648 172 341 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984974 394221 0.974527 0.989685 0.849556 23562 1 76 0.00385747 279 0 1.01185e+08 0.0251444 1.04402e+06 1.0224e+08 1.80747e+07 23584 5.01856e+07 0 0.124971 0.989685 0.840793 1.01185e+08 0.00574892 2.191e+07 1.15869e+07 2.20785e+07 265 2.21613e+07 1.82094e+07 0.00479869 2.22804e+07 50.134 0.0102115 0.994397 0 50.1915 GTEX-OIZH-0926-SM-48TBR 2 B1 11.8 x 6.2 mm specimen 6.1 Spleen Spleen 0002106 133 380 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.985334 242228 0.964762 0.987554 0.784064 23298 1 76 0.00243928 131 0 6.20743e+07 0.0337455 271806 6.28566e+07 3.3949e+06 23321 3.08302e+07 0 0.180698 0.987554 0.774306 6.20743e+07 0.00321799 1.36462e+07 7.99718e+06 1.37361e+07 147 1.37733e+07 9.54341e+06 0.00282776 1.37455e+07 49.9495 0.00432423 0.989775 0 50.1641 GTEX-OIZH-1326-SM-3NB1H 1 B1 Well preserved. 1.3 x 6mm nubbin of cortex attached to a 12 x 7mm fat globule, roughly 10% of specimen. Fat is under-fixed centrally. 8 Adrenal Gland Adrenal Gland 0002369 89 424 BP-18147 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986799 474527 0.973477 0.991038 0.849033 22797 1 76 0.0039066 272 0 1.00352e+08 0.0262074 3.30274e+06 1.01259e+08 1.66114e+07 22819 4.98196e+07 0 0.124444 0.991038 0.841424 1.00352e+08 0.00583947 2.21087e+07 1.77204e+07 2.22976e+07 280 2.23535e+07 1.62871e+07 0.0048689 2.2454e+07 50.1122 0.0326167 0.995276 0 50.2127 GTEX-OIZH-1426-SM-3NB1O 1 B1 Remarkably well-preserved epithelium and mucosa. Mucosal thickness ranges from 15-20% of specimen 6.8 Colon Colon - Transverse 0001157 180 333 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985627 292856 0.972231 0.989959 0.820045 24807 1 76 0.0040987 379 0 1.08443e+08 0.0270424 2.52734e+06 1.09543e+08 1.8289e+07 24839 5.37952e+07 0 0.152186 0.989959 0.811811 1.08443e+08 0.00597751 2.38334e+07 1.38734e+07 2.41233e+07 352 2.41356e+07 1.54391e+07 0.00503399 2.42544e+07 50.1227 0.0230717 0.994292 0 50.3023 GTEX-OIZH-1526-SM-3NB1J 1 B1 Some areas approach 0-remarkably well-preserved. Approximately 50% of specimen is 'pure' mucosa 7.3 Stomach Stomach 0000945 187 326 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98508 381659 0.971958 0.989773 0.836882 22860 1 76 0.00392637 195 0 8.72213e+07 0.0277708 758138 8.81225e+07 1.50782e+07 22882 4.32618e+07 0 0.135076 0.989773 0.828323 8.72213e+07 0.00602787 1.88069e+07 1.10277e+07 1.89989e+07 203 1.90395e+07 1.52386e+07 0.00497214 1.91581e+07 50.1552 0.00860322 0.994466 0 50.2539 GTEX-OIZH-1626-SM-2D451 0 B1 Approximately 15 x 5mm, good specimen 7.9 Muscle Muscle - Skeletal 0011907 234 279 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-1626-SM-2HMKI 0 B1 Approximately 15 x 5mm, good specimen 7.9 Muscle Muscle - Skeletal 0011907 234 279 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.945905 163143 0.982471 0.952756 0.886356 20456 1 76 0.00255206 278 0 1.12217e+08 0.0172877 2.50457e+06 1.17781e+08 1.61932e+07 20464 5.55403e+07 0 0.0961155 0.952756 0.844481 1.12217e+08 0.008903 2.41194e+07 1.43266e+07 2.45115e+07 295 2.48515e+07 2.20831e+07 0.00570469 2.44616e+07 49.6047 0.0212646 0.959607 0 50.4032 GTEX-OIZH-1826-SM-2QU54 1 B1 4 x 6.5mm specimen. Foci of Monckeberg's medial sclerosis 7.4 Blood Vessel Artery - Tibial 0007610 241 272 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OIZH-1826-SM-2YUNP 1 B1 4 x 6.5mm specimen. Foci of Monckeberg's medial sclerosis 7.4 Blood Vessel Artery - Tibial 0007610 241 272 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.83184 101570 0.976899 0.833898 0.848281 20448 1 76 0.00211934 137 0 6.66537e+07 0.0226559 258148 7.99303e+07 7.16402e+06 20462 3.29872e+07 0 0.128619 0.833898 0.707379 6.66537e+07 0.00355107 1.43503e+07 5.07636e+06 1.464e+07 152 1.46825e+07 1.33756e+07 0.00283344 1.44592e+07 49.6168 0.00322966 0.835955 0 50.4997 GTEX-OIZH-2026-SM-3NB1M 1 B1 Peripheral specimen, glandular atrophy 6 Prostate Prostate 0002367 157 356 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983853 707613 0.955611 0.988567 0.752419 26319 1 76 0.00418514 374 0 1.18749e+08 0.0441259 1.32308e+06 1.20122e+08 2.16879e+07 26372 5.88957e+07 0 0.203192 0.988567 0.743816 1.18749e+08 0.00605606 2.56864e+07 3.0036e+07 2.61301e+07 358 2.61962e+07 1.47584e+07 0.00511614 2.61571e+07 49.9626 0.0110145 0.99328 0 50.4282 GTEX-OIZH-2126-SM-3NB1P 1 B1 10.5 x 4.5. Complete spermatogenesis is present 7.7 Testis Testis 0000473 193 320 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984171 552147 0.932415 0.988717 0.733926 34034 1 76 0.00391445 207 0 1.08076e+08 0.067227 718257 1.09309e+08 1.91457e+07 34102 5.36113e+07 0 0.198489 0.988717 0.725645 1.08076e+08 0.0058283 2.25449e+07 1.79005e+07 2.26915e+07 203 2.28905e+07 1.91112e+07 0.00486698 2.27959e+07 49.8965 0.00657087 0.993262 0 50.162 GTEX-OIZH-2626-SM-2D44X 1 B1 10.5 x 11.5 mm specimen, no adenomatoid nodules noted 6.6 Thyroid Thyroid 0002046 104 409 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OIZH-2626-SM-2HMJM 1 B1 10.5 x 11.5 mm specimen, no adenomatoid nodules noted 6.6 Thyroid Thyroid 0002046 104 409 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.621906 158273 0.966717 0.631436 0.789359 25081 1 76 0.0037198 124 0 8.49169e+07 0.0329916 569065 1.34482e+08 3.73845e+07 25117 4.16291e+07 0 0.177358 0.631436 0.498429 8.49169e+07 0.0246018 1.8261e+07 1.04704e+07 1.85382e+07 142 1.90401e+07 1.33484e+07 0.0140032 1.89112e+07 49.8301 0.00423152 0.640966 0 50.3766 GTEX-OIZH-3026-SM-3NB1G 1 B1 Good clean specimen. 8.9 Blood Vessel Artery - Coronary 0001621 123 390 BP-18148 RNA isolation_PAXgene Tissue miRNA 08/10/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.988185 448367 0.976239 0.991908 0.853148 22499 1 76 0.00365541 215 0 1.02379e+08 0.0233656 267715 1.03214e+08 1.62217e+07 22514 5.08571e+07 0 0.123091 0.991908 0.846244 1.02379e+08 0.00545724 2.22174e+07 1.0999e+07 2.24141e+07 232 2.24955e+07 2.20853e+07 0.00455295 2.25068e+07 50.0126 0.00259378 0.99563 0 50.2204 GTEX-OIZI-0005-SM-2XCED C1 7.7 Blood Whole Blood 0013756 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.72303 413050 0.963096 0.724584 0.782132 20035 1 76 0.00319044 140 0 7.71276e+07 0.036266 415153 1.06444e+08 1.21372e+07 20056 3.81214e+07 0 0.180964 0.724584 0.566721 7.71276e+07 0.0108797 1.68155e+07 2.11782e+07 1.70052e+07 159 1.69652e+07 1.39599e+07 0.00702685 1.70072e+07 50.0618 0.0039002 0.726139 0 50.2804 GTEX-OIZI-0005-SM-2XV5F C1 7.7 Blood Whole Blood 0013756 BP-18095 RNA isolation_PAXgene Blood RNA (Manual) 08/08/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0008-SM-2XCFD C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.979309 253089 0.976045 0.982139 0.833706 23585 1 76 0.0020567 302 0 1.44909e+08 0.0235866 828044 1.47545e+08 1.5757e+07 23626 7.20153e+07 0 0.142339 0.982139 0.818815 1.44909e+08 0.00888576 3.21106e+07 1.21957e+07 3.22073e+07 320 3.23058e+07 3.11226e+07 0.00546139 3.24161e+07 50.0852 0.00561215 0.984969 0 50.0752 GTEX-OIZI-0008-SM-2XV77 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0126-SM-3NB13 1 C1 Active spermatogenesis 6.7 Testis Testis 0000473 354 241 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98551 561843 0.940637 0.989426 0.739512 34939 1 76 0.00389023 378 0 1.34256e+08 0.0591042 2.47617e+06 1.35691e+08 2.18046e+07 35018 6.66585e+07 0 0.201125 0.989426 0.731692 1.34256e+08 0.00537619 2.83831e+07 2.07001e+07 2.85579e+07 341 2.86998e+07 1.94824e+07 0.00463027 2.87204e+07 50.0179 0.0182486 0.993342 0 50.1535 GTEX-OIZI-0226-SM-2XCEE 1 C1 About 25% unfixed 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 394 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.871281 98058 0.974733 0.875373 0.779061 22720 1 76 0.00253486 140 0 6.33894e+07 0.0249747 221388 7.24142e+07 8.21179e+06 22742 3.14205e+07 0 0.195672 0.875373 0.681969 6.33894e+07 0.00985755 1.39678e+07 5.84876e+06 1.39877e+07 147 1.40828e+07 1.01264e+07 0.00617909 1.41502e+07 50.1194 0.00305725 0.879464 0 50.0355 GTEX-OIZI-0226-SM-2XV4P 1 C1 About 25% unfixed 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 394 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0426-SM-2XCEF 1 C1 No fat in aliquot. 5x2.6mm 7.4 Nerve Nerve - Tibial 0001323 413 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.886888 120777 0.964766 0.889396 0.752525 24761 1 76 0.00252755 182 0 8.65536e+07 0.0349694 367015 9.73173e+07 1.13692e+07 24811 4.29714e+07 0 0.212241 0.889396 0.669293 8.65536e+07 0.00925594 1.89732e+07 7.6404e+06 1.89554e+07 185 1.90012e+07 1.25334e+07 0.00588226 1.91507e+07 50.196 0.00377132 0.891904 0 49.9767 GTEX-OIZI-0426-SM-2XV52 1 C1 No fat in aliquot. 5x2.6mm 7.4 Nerve Nerve - Tibial 0001323 413 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0526-SM-2XCEG 0 C1 No lesion. 2mm diameter 7.3 Blood Vessel Artery - Tibial 0007610 414 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.877592 129620 0.972247 0.880916 0.816362 22601 1 76 0.00244328 167 0 8.49751e+07 0.0273511 387648 9.64623e+07 1.60543e+07 22629 4.21586e+07 0 0.155885 0.880916 0.719146 8.49751e+07 0.00926507 1.83181e+07 7.75902e+06 1.83632e+07 187 1.84297e+07 1.50927e+07 0.00584131 1.85449e+07 50.1558 0.00401865 0.884239 0 50.0615 GTEX-OIZI-0526-SM-2XV55 0 C1 No lesion. 2mm diameter 7.3 Blood Vessel Artery - Tibial 0007610 414 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0626-SM-2XCEH 1 C1 7.6x7mm 8.4 Muscle Muscle - Skeletal 0011907 418 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.90193 145279 0.982255 0.905043 0.865126 20772 1 76 0.00242567 200 0 9.40734e+07 0.0174621 941433 1.03944e+08 1.29592e+07 20793 4.67025e+07 0 0.117129 0.905043 0.782976 9.40734e+07 0.00963938 2.01092e+07 1.00164e+07 2.04017e+07 235 2.03086e+07 1.55598e+07 0.00602012 2.0454e+07 50.1784 0.00905715 0.908156 0 50.361 GTEX-OIZI-0626-SM-2XV6K 1 C1 7.6x7mm 8.4 Muscle Muscle - Skeletal 0011907 418 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0726-SM-2XCEI 1 C1 8 x 6.7 mm. Focal scar <10% 7.1 Thyroid Thyroid 0002046 445 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.9721 190370 0.965392 0.975074 0.746687 25577 1 76 0.00243961 211 0 1.1212e+08 0.0343016 451570 1.14986e+08 1.18504e+07 25645 5.56751e+07 0 0.218705 0.975074 0.728075 1.1212e+08 0.00918152 2.44671e+07 1.03316e+07 2.45883e+07 240 2.46263e+07 1.60467e+07 0.00580028 2.47427e+07 50.1178 0.00392716 0.978047 0 50.1235 GTEX-OIZI-0726-SM-2XV6V 1 C1 8 x 6.7 mm. Focal scar <10% 7.1 Thyroid Thyroid 0002046 445 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-OIZI-0926-SM-E6CHF 1 C1 Patchy hypereosinophilia (ischemia). Central fracture artifact, possible underfixation. Refixation confirms initial poor fixation. 8.9x9.8mm 5.6 Heart Heart - Left Ventricle 0006566 455 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.994532 315472 0.979867 0.995778 0.842002 22906 1 76 0.00190345 272 0 1.00074e+08 0.0198458 495234 1.00498e+08 6.15527e+06 22928 4.98763e+07 0 0.137865 0.995778 0.838448 1.00074e+08 0.0024162 2.21926e+07 8.94812e+06 2.24145e+07 291 2.23711e+07 1.9559e+07 0.00215951 2.23421e+07 49.9676 0.00492781 0.997025 0 50.2487 GTEX-OIZI-1026-SM-2VCU2 1 C1 Atelectasis Lung Lung 0008952 459 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762330002_R02C01 GTEX-OIZI-1026-SM-2XK39 1 C1 Atelectasis Lung Lung 0008952 459 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R04C01 GTEX-OIZI-1026-SM-3NB1K 1 C1 Atelectasis 8.1 Lung Lung 0008952 459 240 BP-18178 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985105 394624 0.969401 0.989289 0.778101 25429 1 76 0.00403269 274 0 1.08669e+08 0.0301946 567494 1.09846e+08 1.82803e+07 25474 5.39215e+07 0 0.1913 0.989289 0.769767 1.08669e+08 0.0058136 2.38455e+07 1.24345e+07 2.40359e+07 266 2.41415e+07 1.80287e+07 0.00491938 2.41759e+07 50.0355 0.00516628 0.993473 0 50.1988 GTEX-OIZI-1026-SM-4SVQ7 1 C1 Atelectasis Lung Lung 0008952 459 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OIZI-1026-SM-5JK2X 1 C1 Atelectasis Lung Lung 0008952 459 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-OIZI-1026-SM-CLTGE 1 C1 Atelectasis Lung Lung 0008952 459 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-OIZI-1126-SM-3NB1F 1 C1 endothelium sloughed. 11 x 1.5mm 8.3 Blood Vessel Artery - Aorta 0001496 462 240 BP-18180 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985298 540637 0.971546 0.989824 0.831437 23892 1 76 0.00381191 378 0 1.21093e+08 0.0280651 333990 1.22338e+08 2.1917e+07 23923 6.00754e+07 0 0.140108 0.989824 0.822976 1.21093e+08 0.00564967 2.57141e+07 1.5812e+07 2.60135e+07 352 2.60955e+07 2.38337e+07 0.00472659 2.61641e+07 50.0656 0.00273005 0.994349 0 50.2894 GTEX-OIZI-1326-SM-3NB1B 0 C1 well-visualized ganglion cells 8.2 Esophagus Esophagus - Muscularis 0004648 466 240 BP-18180 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985199 411402 0.973245 0.989907 0.821017 23317 1 76 0.00379761 212 0 9.6314e+07 0.0265074 538003 9.7296e+07 1.63206e+07 23345 4.77767e+07 0 0.152228 0.989907 0.81273 9.6314e+07 0.00568467 2.05361e+07 1.21043e+07 2.07324e+07 223 2.07881e+07 1.70604e+07 0.00473666 2.09078e+07 50.1434 0.00552955 0.994614 0 50.2378 GTEX-OIZI-1426-SM-3NB1T 1 C1 Squamous mucosa with prominent muscularis mucosae 8.8 Esophagus Esophagus - Mucosa 0006920 469 240 BP-18180 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984719 484856 0.972648 0.989259 0.813099 24701 1 76 0.00399939 271 0 1.14852e+08 0.0267366 401505 1.16099e+08 2.04888e+07 24732 5.6975e+07 0 0.159549 0.989259 0.804366 1.14852e+08 0.00605744 2.56273e+07 1.91729e+07 2.58237e+07 259 2.59859e+07 2.30027e+07 0.00502369 2.5978e+07 49.9924 0.00345829 0.993799 0 50.1909 GTEX-OIZI-1526-SM-E6CHI 1 C1 9 x 9 mm 5.5 Pancreas Pancreas 0001150 471 240 BP-18180 RNA isolation_PAXgene Tissue miRNA 08/11/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993698 279188 0.976402 0.995136 0.837158 22587 1 76 0.00198494 150 0 9.52128e+07 0.023384 228909 9.56783e+07 6.15352e+06 22611 4.74355e+07 0 0.139243 0.995136 0.833086 9.52128e+07 0.00250402 2.16997e+07 2.08093e+07 2.19772e+07 165 2.18334e+07 2.66544e+07 0.0022441 2.19693e+07 50.1551 0.00239249 0.996573 0 50.3177 GTEX-OOBJ-0003-SM-2BWZC B1 Blood Whole Blood 0013756 -56 BP-18166 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828062_R04C01 GTEX-OOBJ-0003-SM-2XK2P B1 Blood Whole Blood 0013756 -56 BP-18166 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R01C02 GTEX-OOBJ-0003-SM-4X61D B1 Blood Whole Blood 0013756 -56 BP-18166 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OOBJ-0003-SM-5JK45 B1 Blood Whole Blood 0013756 -56 BP-18166 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/11/2011 LCSET-5036,LCSET-7729 09/08/2015 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-OOBJ-0006-SM-2D44R B1 8.6 Blood Whole Blood 0013756 BP-18161 RNA isolation_PAXgene Blood RNA (Manual) 08/11/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBJ-0006-SM-2I3F4 B1 8.6 Blood Whole Blood 0013756 BP-18161 RNA isolation_PAXgene Blood RNA (Manual) 08/11/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.852053 807144 0.946257 0.854685 0.799414 19492 1 76 0.00286467 107 0 6.9184e+07 0.0531724 270507 8.09468e+07 9.43317e+06 19502 3.43553e+07 0 0.146843 0.854685 0.683247 6.9184e+07 0.00457198 1.50223e+07 6.30498e+07 1.55209e+07 130 1.55944e+07 1.5476e+07 0.0037157 1.5161e+07 49.2955 0.00334179 0.857317 0 50.8163 GTEX-OOBJ-0008-SM-3NB26 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.9883 809579 0.973188 0.992137 0.87476 21717 1 76 0.00371432 285 0 1.1599e+08 0.0264695 312243 1.1691e+08 1.97633e+07 21733 5.76237e+07 0 0.0984284 0.992137 0.867882 1.1599e+08 0.00540916 2.55225e+07 2.15125e+07 2.58679e+07 327 2.5965e+07 2.62142e+07 0.00455846 2.58621e+07 49.9007 0.0026708 0.995974 0 50.3361 GTEX-OOBJ-0008-SM-DO3X5 B1 Skin Cells - Cultured fibroblasts EFO_0002009 BP-63833 RNA isolation_Trizol Manual (Cell Pellet) 05/22/2015 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-OOBJ-0126-SM-E6CJW 1 B1 Epidermis is ~2-3% of specimen thickness. Patchy areas of soft tissue (deep) are poorly fixed. 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 211 1337 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992953 340054 0.976073 0.994248 0.82789 24113 1 76 0.0020596 398 0 1.15832e+08 0.0237057 782076 1.16502e+08 7.46462e+06 24144 5.76868e+07 0 0.148183 0.994248 0.823128 1.15832e+08 0.00282114 2.51541e+07 1.14681e+07 2.54423e+07 336 2.52634e+07 1.94168e+07 0.00243988 2.54608e+07 50.1946 0.00671298 0.995544 0 50.2847 GTEX-OOBJ-0226-SM-2D453 1 B1 18x11mm. Central 80% is unfixed 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 210 1338 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBJ-0226-SM-2YUMM 1 B1 18x11mm. Central 80% is unfixed 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 210 1338 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.864324 111470 0.974757 0.869135 0.81811 22363 1 76 0.0023499 140 0 6.60341e+07 0.0248719 286502 7.59768e+07 6.46834e+06 22384 3.2607e+07 0 0.156648 0.869135 0.711047 6.60341e+07 0.00356055 1.42094e+07 5.21201e+06 1.4494e+07 152 1.46285e+07 1.16361e+07 0.00295188 1.44151e+07 49.6326 0.00377091 0.873945 0 50.4959 GTEX-OOBJ-0326-SM-2D452 1 B1 9.4x7mm. Clean specimen. Diffuse contraction bands + nuclear hypertrophy c/w mild ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 119 1429 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBJ-0326-SM-2I3F8 1 B1 9.4x7mm. Clean specimen. Diffuse contraction bands + nuclear hypertrophy c/w mild ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 119 1429 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.361461 59258 0.980669 0.377017 0.853357 20471 1 76 0.00366998 93 0 6.37125e+07 0.0190561 1.76765e+06 1.68991e+08 5.77587e+07 20480 3.03744e+07 0 0.127312 0.377017 0.32173 6.37125e+07 0.0690104 1.33583e+07 9.04075e+06 1.38269e+07 112 1.49197e+07 1.0914e+07 0.0349921 1.45557e+07 49.3826 0.01046 0.392574 0 50.8617 GTEX-OOBJ-0326-SM-33HBO 1 B1 9.4x7mm. Clean specimen. Diffuse contraction bands + nuclear hypertrophy c/w mild ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 119 1429 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.684437 162569 0.98099 0.688404 0.863049 21674 1 76 0.0023138 266 0 9.81293e+07 0.0187582 2.77931e+06 1.42546e+08 1.68023e+07 21690 4.85777e+07 0 0.117942 0.688404 0.594126 9.81293e+07 0.0068782 2.15055e+07 1.26491e+07 2.21224e+07 312 2.2293e+07 1.62359e+07 0.00458284 2.18383e+07 49.4849 0.0194976 0.692371 0 50.707 GTEX-OOBJ-0326-SM-5SI84 1 B1 9.4x7mm. Clean specimen. Diffuse contraction bands + nuclear hypertrophy c/w mild ischemic changes 7.5 Heart Heart - Left Ventricle 0006566 119 1429 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990362 298728 0.979491 0.993716 0.854543 20719 1 76 0.00201168 197 0 8.35294e+07 0.0202545 2.00203e+06 8.40576e+07 8.14523e+06 20734 4.155e+07 0 0.124947 0.993716 0.849174 8.35294e+07 0.00306057 1.85803e+07 1.43075e+07 1.83529e+07 252 1.83762e+07 1.5832e+07 0.00253436 1.88096e+07 50.5828 0.0238174 0.997071 0 49.6922 GTEX-OOBJ-0426-SM-3NB1S 1 B1 Specimens average 1.8mm thickness, clean sections. 6.8 Blood Vessel Artery - Aorta 0001496 124 1424 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984859 327170 0.973852 0.989428 0.828396 23748 1 76 0.00401438 213 0 1.01338e+08 0.0257021 256411 1.0242e+08 1.79674e+07 23776 5.02513e+07 0 0.145456 0.989428 0.819638 1.01338e+08 0.0057945 2.18877e+07 1.05091e+07 2.20614e+07 245 2.2171e+07 1.84815e+07 0.00490033 2.222e+07 50.0551 0.00250352 0.993997 0 50.1976 GTEX-OOBJ-0526-SM-48TDK 1 B1 9 x 14mm. Diffuse mild edema. 6.7 Lung Lung 0008952 129 1419 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989404 223987 0.968453 0.991775 0.801582 23658 1 76 0.00229015 128 0 6.01228e+07 0.0311795 173882 6.06213e+07 3.16025e+06 23680 2.99045e+07 0 0.166871 0.991775 0.79499 6.01228e+07 0.00303969 1.31753e+07 6.24764e+06 1.32884e+07 149 1.33117e+07 8.74906e+06 0.00266402 1.3288e+07 49.9556 0.00286833 0.994147 0 50.2136 GTEX-OOBJ-0826-SM-3NB2K 1 B1 11.2x 8.3mm. About 10% macrovesicular steatosis. 7.2 Liver Liver 0001114 139 1409 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985 422508 0.975095 0.989724 0.83293 22768 1 76 0.00409947 192 0 1.02267e+08 0.0244952 990755 1.03328e+08 1.82225e+07 22790 5.07115e+07 0 0.142165 0.989724 0.824371 1.02267e+08 0.00596374 2.17964e+07 1.85685e+07 2.19341e+07 216 2.20633e+07 2.10582e+07 0.00502716 2.21117e+07 50.0548 0.00958842 0.994448 0 50.1574 GTEX-OOBJ-0926-SM-48TDO 2 B1 9.7x5.5mm. Foci appear poorly fixed. 7.5 Spleen Spleen 0002106 133 1415 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.983962 243059 0.957799 0.986244 0.720985 24171 1 76 0.00294025 119 0 6.56561e+07 0.0400276 139981 6.65718e+07 3.66596e+06 24209 3.25718e+07 0 0.236814 0.986244 0.711068 6.56561e+07 0.00360678 1.44027e+07 1.13225e+07 1.4463e+07 136 1.4555e+07 9.65893e+06 0.00327274 1.44591e+07 49.8347 0.00210271 0.988527 0 50.1046 GTEX-OOBJ-1026-SM-3NB2L 1 B1 11.2x8.3mm. Well preserved, less than 5% fat. 6.3 Pancreas Pancreas 0001150 137 1411 BP-18253 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984433 372548 0.978728 0.988491 0.852617 21943 1 76 0.00408174 114 0 1.06228e+08 0.0207016 160489 1.07464e+08 1.82193e+07 21962 5.27405e+07 0 0.126111 0.988491 0.842804 1.06228e+08 0.00604834 2.44348e+07 5.32115e+07 2.49008e+07 132 2.48659e+07 3.36434e+07 0.005061 2.49023e+07 50.0366 0.00149342 0.992548 0 50.4722 GTEX-OOBJ-1426-SM-E6CHH 2 B1 Much of specimen also poorly fixed (adipose portions-separation and fragmenting of sections. Mucosal thickness averages 150-200 microns, ~ 10% specimen thicknesss 5.8 Colon Colon - Transverse 0001157 174 1374 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992519 347400 0.97434 0.993843 0.825915 23695 1 76 0.00231238 274 0 9.03997e+07 0.0246032 542046 9.09598e+07 5.58315e+06 23730 4.49923e+07 0 0.148424 0.993843 0.82083 9.03997e+07 0.00294988 2.01467e+07 1.1604e+07 2.03273e+07 292 2.02965e+07 1.46466e+07 0.00263071 2.02726e+07 49.9705 0.00595919 0.995167 0 50.2231 GTEX-OOBJ-1526-SM-3NB1Q 1 B1 Extremely well preserved. 1 of 4 pieces with little-no mucosa, which averages .8mm thickness in 3 pieces-two of which are 30-50%mucosa in thickness. Focal adipose areas underfixed. 7.1 Stomach Stomach 0000945 179 1369 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.980282 406508 0.974119 0.985031 0.809837 24665 1 76 0.00450937 349 0 1.09351e+08 0.0246601 716837 1.11012e+08 1.97237e+07 24695 5.41634e+07 0 0.164282 0.985031 0.797714 1.09351e+08 0.00657475 2.45563e+07 7.44167e+07 2.50066e+07 278 2.51685e+07 2.26871e+07 0.00553708 2.49075e+07 49.7394 0.00645727 0.989779 0 50.4543 GTEX-OOBJ-1626-SM-2D44Y 0 B1 17 x 9mm specimen, minimal fat. 8 Muscle Muscle - Skeletal 0011907 217 1331 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBJ-1626-SM-2I3F7 0 B1 17 x 9mm specimen, minimal fat. 8 Muscle Muscle - Skeletal 0011907 217 1331 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.737432 153746 0.977148 0.740475 0.879916 18386 1 76 0.00235869 142 0 6.2163e+07 0.0226189 761843 8.39501e+07 1.02668e+07 18390 3.0841e+07 0 0.0972318 0.740475 0.651556 6.2163e+07 0.00440908 1.32348e+07 1.1427e+07 1.37072e+07 146 1.37509e+07 1.24371e+07 0.00337967 1.34073e+07 49.3676 0.00907495 0.743518 0 50.8767 GTEX-OOBJ-1826-SM-3NB1C 1 B1 4.4 x 6.8 mm specimen. 7.5 Blood Vessel Artery - Tibial 0007610 224 1324 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983429 420429 0.972256 0.988469 0.822815 22912 1 76 0.00405685 215 0 9.87227e+07 0.0273376 314965 9.98743e+07 1.81135e+07 22938 4.89147e+07 0 0.149442 0.988469 0.813327 9.87227e+07 0.00604637 2.10186e+07 1.06355e+07 2.11916e+07 224 2.12929e+07 1.81042e+07 0.00504654 2.13922e+07 50.1164 0.00315361 0.993509 0 50.2049 GTEX-OOBJ-2026-SM-3NB1R 1 B1 13 x 9.7mm. Remarkably well preserved. Patchy glandular (papillary) hyperplasia, focal chronic prostatitis 7.2 Prostate Prostate 0002367 157 1391 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.978351 477676 0.958084 0.983688 0.712046 25587 1 76 0.00434512 141 0 8.33373e+07 0.0412051 350987 8.47192e+07 1.77958e+07 25643 4.11926e+07 0 0.246038 0.983688 0.700431 8.33373e+07 0.00606972 1.79524e+07 1.04937e+07 1.80022e+07 165 1.81638e+07 1.11473e+07 0.00520274 1.82156e+07 50.0712 0.00414294 0.989025 0 50.0693 GTEX-OOBJ-2126-SM-3NB1N 1 B1 12 x 8.8mm. Good spermatogenesis evident 6.7 Testis Testis 0000473 183 1365 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.982916 1.18731e+06 0.894671 0.987434 0.669006 34358 1 76 0.00416177 180 0 1.01391e+08 0.105007 926086 1.02682e+08 1.7735e+07 34436 5.02947e+07 0 0.225666 0.987434 0.660599 1.01391e+08 0.00607011 2.02189e+07 5.2606e+07 2.04701e+07 179 2.06132e+07 1.43216e+07 0.00511158 2.05064e+07 49.8702 0.009019 0.991952 0 50.3086 GTEX-OOBJ-2626-SM-2D44W 1 B1 Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section. 6.2 Thyroid Thyroid 0002046 105 1443 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBJ-2626-SM-2I3F6 1 B1 Possible 0.4 x 0.6mm occult papillary ca, pending slide review. Patchy areas of peripheral adipose tissue are poorly fixed, tears and holes in section. 6.2 Thyroid Thyroid 0002046 105 1443 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.8991 223157 0.952354 0.901671 0.715608 24650 1 76 0.00269538 129 0 7.30955e+07 0.0474014 461130 8.10667e+07 8.39865e+06 24702 3.63116e+07 0 0.236746 0.901671 0.645243 7.30955e+07 0.00423986 1.5607e+07 1.36186e+07 1.59245e+07 152 1.59623e+07 9.33991e+06 0.00346542 1.57544e+07 49.6723 0.00568828 0.904243 0 50.5036 GTEX-OOBJ-3026-SM-3NB1D 1 B1 4.8 x 5.1mm specimen. ~20 circumferential atherosclerotic narrowing 7.3 Blood Vessel Artery - Coronary 0001621 117 1431 BP-18254 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984251 370186 0.971381 0.988974 0.828079 23629 1 76 0.00404826 172 0 8.92898e+07 0.0282028 403469 9.02852e+07 1.57162e+07 23649 4.42677e+07 0 0.143302 0.988974 0.818949 8.92898e+07 0.00614777 1.90905e+07 1.0527e+07 1.934e+07 201 1.93911e+07 1.6237e+07 0.005093 1.94454e+07 50.07 0.00446883 0.993697 0 50.3246 GTEX-OOBK-0004-SM-2BWYT B1 Blood Whole Blood 0013756 -118 BP-18209 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2011 GTExHapMap_5M_Sept2011 10/18/2011 Illumina OMNI SNP Array OMNI 6293828062_R01C01 GTEX-OOBK-0004-SM-2XK1M B1 Blood Whole Blood 0013756 -118 BP-18209 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R05C02 GTEX-OOBK-0004-SM-3USRV B1 Blood Whole Blood 0013756 -118 BP-18209 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2011 LCSET-2654,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-OOBK-0004-SM-5JK4J B1 Blood Whole Blood 0013756 -118 BP-18209 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/12/2011 LCSET-5036 03/26/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OOBK-0005-SM-2D43L B1 8.3 Blood Whole Blood 0013756 -118 BP-18235 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBK-0005-SM-2YUMG B1 8.3 Blood Whole Blood 0013756 -118 BP-18235 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.674298 774129 0.917716 0.676918 0.755877 17789 1 76 0.00228586 96 0 4.92311e+07 0.0818107 104183 7.27284e+07 7.05944e+06 17796 2.43033e+07 0 0.161839 0.676918 0.511667 4.92311e+07 0.0043545 1.02156e+07 5.61579e+07 1.06501e+07 105 1.07417e+07 1.0429e+07 0.00331618 1.0303e+07 48.9578 0.00143249 0.679538 0 51.0414 GTEX-OOBK-0008-SM-3NB27 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986516 1.02403e+06 0.968029 0.990482 0.853971 22952 1 76 0.00361094 381 0 1.25889e+08 0.031608 435390 1.27098e+08 2.22666e+07 22978 6.25378e+07 0 0.114058 0.990482 0.845843 1.25889e+08 0.00530536 2.7659e+07 2.84466e+07 2.79044e+07 346 2.80612e+07 2.76649e+07 0.00445476 2.79996e+07 49.9451 0.00342561 0.994449 0 50.2209 GTEX-OOBK-0126-SM-2QU3Y 1 B1 0-1. 9.7x3mm. Epithelium is ~115micronc, 3-5% of specimen thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 261 731 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-OOBK-0126-SM-2YUND 1 B1 0-1. 9.7x3mm. Epithelium is ~115micronc, 3-5% of specimen thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 261 731 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.79567 103663 0.975048 0.797321 0.79738 23251 1 76 0.00222092 156 0 6.80487e+07 0.0247007 357354 8.53467e+07 7.5172e+06 23275 3.36673e+07 0 0.177668 0.797321 0.635768 6.80487e+07 0.00404123 1.47714e+07 6.70408e+06 1.50681e+07 153 1.51093e+07 1.1767e+07 0.00312919 1.48618e+07 49.5871 0.00418709 0.798971 0 50.4972 GTEX-OOBK-0226-SM-2YUMF 1 B1 1. 5.7x5.4mm. Small central area (~15-20%)poorly fixed 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 269 725 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.487529 58893 0.976943 0.481971 0.80131 20651 1 76 0.00222845 102 0 4.16572e+07 0.0226437 150444 8.64309e+07 9.93759e+06 20658 2.03326e+07 0 0.175633 0.481971 0.386208 4.16572e+07 0.00515766 9.29583e+06 4.14477e+06 9.5398e+06 105 9.30417e+06 7.32153e+06 0.00370995 9.0691e+06 49.3603 0.00174063 0.476413 0 50.6476 GTEX-OOBK-0425-SM-3LK5O 1 B1 1. 10x1.6mm. Clean specimen 6.9 Blood Vessel Artery - Aorta 0001496 201 725 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.871637 270496 0.974179 0.871636 0.845088 23447 1 76 0.00221397 276 0 1.06806e+08 0.0254257 342744 1.22535e+08 1.18411e+07 23468 5.30524e+07 0 0.129092 0.871636 0.736609 1.06806e+08 0.00349033 2.32122e+07 1.09048e+07 2.35613e+07 319 2.34476e+07 2.03488e+07 0.00285215 2.33315e+07 49.8759 0.00279712 0.871636 0 50.3732 GTEX-OOBK-0526-SM-2D43Q 1 B1 1. 13.5x7mm. Patchy emphysematous changes, mild edema 8.2 Lung Lung 0008952 177 798 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBK-0526-SM-2HMJJ 1 B1 1. 13.5x7mm. Patchy emphysematous changes, mild edema 8.2 Lung Lung 0008952 177 798 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.928532 172320 0.97473 0.937806 0.816913 24861 1 76 0.00284695 206 0 9.61988e+07 0.0248733 424926 1.02579e+08 1.48122e+07 24892 4.74451e+07 0 0.157817 0.937806 0.766106 9.61988e+07 0.00931044 2.11009e+07 9.48521e+06 2.14108e+07 240 2.18297e+07 1.77188e+07 0.00604674 2.15732e+07 49.7045 0.00414244 0.947081 0 50.3646 GTEX-OOBK-0625-SM-3LK5P 1 B1 0-1. Epithelial thickness ranges from 245-445microns. 8.8 Esophagus Esophagus - Mucosa 0006920 207 774 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.86635 256227 0.976176 0.866463 0.846234 23120 1 76 0.00231451 280 0 9.9901e+07 0.023236 704289 1.15297e+08 1.11298e+07 23143 4.96515e+07 0 0.129942 0.866463 0.733231 9.9901e+07 0.00357564 2.24282e+07 1.4534e+07 2.26794e+07 310 2.26219e+07 2.04157e+07 0.00294499 2.25148e+07 49.8814 0.00610846 0.866577 0 50.2785 GTEX-OOBK-0726-SM-3LK5Q 1 B1 0-1. One of three pieces with poor central fixation, sizes average 9x4mm 7.7 Esophagus Esophagus - Muscularis 0004648 211 774 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.968552 205967 0.977284 0.969444 0.85485 22330 1 76 0.00215368 275 0 9.07271e+07 0.0224221 939071 9.35867e+07 8.14674e+06 22348 4.5124e+07 0 0.122434 0.969444 0.828729 9.07271e+07 0.00329125 1.97339e+07 9.0281e+06 1.99258e+07 304 1.98968e+07 1.62671e+07 0.00272194 1.98441e+07 49.9337 0.0100342 0.970336 0 50.2419 GTEX-OOBK-1026-SM-48TC2 1 B1 1. 11.5x10.4mm. Remarkably well-preserved 5.9 Pancreas Pancreas 0001150 211 774 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990939 197321 0.973279 0.992685 0.837347 20506 1 76 0.00188116 107 0 6.37381e+07 0.0265481 333704 6.42078e+07 3.39298e+06 20518 3.17416e+07 0 0.135932 0.992685 0.831222 6.37381e+07 0.0025502 1.44742e+07 1.17985e+07 1.46409e+07 118 1.46173e+07 1.62878e+07 0.00221509 1.46102e+07 49.9879 0.00519725 0.994431 0 50.2863 GTEX-OOBK-1626-SM-2D43R 1 B1 0-1. 12x7mm specimen. 7.9 Muscle Muscle - Skeletal 0011907 285 725 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBK-1626-SM-2HMKG 1 B1 0-1. 12x7mm specimen. 7.9 Muscle Muscle - Skeletal 0011907 285 725 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.590656 80591 0.98497 0.596258 0.891021 18480 1 76 0.00243567 97 0 5.7906e+07 0.0147213 819725 9.71158e+07 1.65739e+07 18483 2.85002e+07 0 0.0939493 0.596258 0.531278 5.7906e+07 0.0099069 1.21298e+07 6.18465e+06 1.22857e+07 119 1.2532e+07 1.25567e+07 0.00613619 1.23492e+07 49.6325 0.0084407 0.601859 0 50.3192 GTEX-OOBK-2025-SM-3LK5S 1 B1 1. 12 x 8.2mm. Mild glandular hyperplasia 6.1 Prostate Prostate 0002367 196 786 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.941386 358054 0.966777 0.941948 0.816259 23706 1 76 0.00221454 271 0 9.42975e+07 0.0329636 777907 1.00109e+08 9.47045e+06 23735 4.68611e+07 0 0.150518 0.941948 0.768873 9.42975e+07 0.00337761 2.03049e+07 1.44949e+07 2.05991e+07 307 2.05598e+07 1.51434e+07 0.00279573 2.04033e+07 49.8089 0.0077706 0.942511 0 50.3596 GTEX-OOBK-2126-SM-3LK5T 2 B1 1-2. 11.7 x 5 mm. 6.4 Testis Testis 0000473 282 731 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.965086 271538 0.917361 0.966169 0.712521 32504 1 76 0.00233536 147 0 7.19128e+07 0.0823053 564026 7.44309e+07 6.61687e+06 32557 3.57408e+07 0 0.204841 0.966169 0.688416 7.19128e+07 0.00358976 1.46903e+07 1.19305e+07 1.48177e+07 142 1.48666e+07 1.15102e+07 0.00296186 1.47166e+07 49.7464 0.00757785 0.967253 0 50.2159 GTEX-OOBK-2626-SM-2D43S 1 B1 1. 13.2x8mm. A few central holes 7.2 Thyroid Thyroid 0002046 189 782 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OOBK-2626-SM-2HMKY 1 B1 1. 13.2x8mm. A few central holes 7.2 Thyroid Thyroid 0002046 189 782 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.498743 99926 0.970986 0.519717 0.790754 24150 1 76 0.0037129 107 0 7.57004e+07 0.0285543 300023 1.45657e+08 4.2934e+07 24173 3.61848e+07 0 0.180233 0.519717 0.410968 7.57004e+07 0.0645873 1.58766e+07 9.59488e+06 1.62614e+07 116 1.75897e+07 1.29162e+07 0.0329218 1.72973e+07 49.581 0.00205979 0.540691 0 50.5987 GTEX-OOBK-3025-SM-48TBP 1 B1 Incorrect specimen-12.5x15.5 mm cardiac muscle, autolysis score 1.Central areas (fat) with poor fixation 8.2 Heart Heart - Left Ventricle 0006566 220 756 BP-18257 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.991789 402355 0.971177 0.993437 0.842877 20588 1 76 0.00160158 123 0 5.64413e+07 0.028496 153165 5.68142e+07 2.94981e+06 20601 2.80922e+07 0 0.1283 0.993437 0.837345 5.64413e+07 0.00232826 1.21576e+07 6.64567e+06 1.22877e+07 135 1.22918e+07 1.15267e+07 0.00196432 1.22522e+07 49.9191 0.0026959 0.995085 0 50.2661 GTEX-OOBK-3125-SM-3LK5R 2 B1 1-2. 15.2 x 15.7 mm. Focal area centrally with poor fixation 8 Adrenal Gland Adrenal Gland 0002369 156 817 BP-18256 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.982041 325310 0.974557 0.982988 0.838481 23527 1 76 0.00230836 270 0 9.26182e+07 0.0250996 1.61496e+06 9.4221e+07 8.90484e+06 23555 4.60207e+07 0 0.136076 0.982988 0.824217 9.26182e+07 0.00354281 2.05087e+07 1.16265e+07 2.06656e+07 287 2.06953e+07 1.54264e+07 0.00292499 2.05597e+07 49.8356 0.0171402 0.983936 0 50.1906 GTEX-OXRK-0004-SM-2H2WZ C1 Blood Whole Blood 0013756 267 BP-18237 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828068_R04C01 GTEX-OXRK-0004-SM-2XJZV C1 Blood Whole Blood 0013756 267 BP-18237 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R05C01 GTEX-OXRK-0004-SM-3USRO C1 Blood Whole Blood 0013756 267 BP-18237 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2011 LCSET-2654,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-OXRK-0004-SM-5JK32 C1 Blood Whole Blood 0013756 267 BP-18237 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OXRK-0006-SM-2D43M C1 8.1 Blood Whole Blood 0013756 BP-18235 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRK-0006-SM-2HML1 C1 8.1 Blood Whole Blood 0013756 BP-18235 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.539577 265855 0.978295 0.54955 0.805689 19127 1 76 0.00376966 78 0 8.05623e+07 0.0192608 217050 1.46597e+08 4.87558e+07 19130 3.9285e+07 0 0.172606 0.54955 0.442766 8.05623e+07 0.0270796 1.84302e+07 1.36792e+08 1.90772e+07 106 1.96843e+07 2.25696e+07 0.0152131 1.93267e+07 49.5417 0.00148059 0.559522 0 50.8625 GTEX-OXRK-0008-SM-3NB28 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.981797 1.38114e+06 0.956423 0.986755 0.846613 21513 1 76 0.00363973 177 0 9.14654e+07 0.0432538 452427 9.26932e+07 1.61649e+07 21531 4.53616e+07 0 0.10981 0.986755 0.835399 9.14654e+07 0.00564433 1.9832e+07 3.62865e+07 2.00408e+07 180 2.01712e+07 2.18382e+07 0.004637 2.01879e+07 50.0206 0.00488091 0.991713 0 50.2619 GTEX-OXRK-0126-SM-3NB1E 1 C1 Well preserved cortex 8.7 Adrenal Gland Adrenal Gland 0002369 278 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.987061 366489 0.97597 0.991155 0.830532 23328 1 76 0.00383545 203 0 1.00983e+08 0.0237261 1.80297e+06 1.01884e+08 1.73335e+07 23354 5.01294e+07 0 0.145439 0.991155 0.823185 1.00983e+08 0.00563187 2.22499e+07 1.33586e+07 2.23397e+07 250 2.2447e+07 1.76034e+07 0.00472995 2.25271e+07 50.089 0.0176962 0.995249 0 50.1007 GTEX-OXRK-0226-SM-2M485 1 C1 8.5x4mm. Epidermis 0.084mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 280 240 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRK-0226-SM-2YUN1 1 C1 8.5x4mm. Epidermis 0.084mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 280 240 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.799009 107090 0.976352 0.801648 0.816582 23396 1 76 0.00236119 193 0 7.4204e+07 0.0233877 900573 9.25642e+07 8.94191e+06 23416 3.66666e+07 0 0.159771 0.801648 0.654611 7.4204e+07 0.00411564 1.61261e+07 6.76743e+06 1.6409e+07 177 1.64778e+07 1.23271e+07 0.00323552 1.62806e+07 49.699 0.00972917 0.804288 0 50.4348 GTEX-OXRK-0226-SM-3NB2G 1 C1 8.5x4mm. Epidermis 0.084mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 280 240 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984827 395462 0.973039 0.989414 0.805918 25064 1 76 0.00403846 305 0 1.09223e+08 0.0266913 1.50811e+06 1.10391e+08 1.95823e+07 25096 5.41754e+07 0 0.167121 0.989414 0.797387 1.09223e+08 0.00594474 2.36941e+07 1.44895e+07 2.39405e+07 298 2.40134e+07 1.75445e+07 0.00498718 2.40948e+07 50.0846 0.0136615 0.994001 0 50.2587 GTEX-OXRK-0326-SM-2M47J 0 C1 About 8% unfixed centrally. 8.5x6.5mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 283 240 BP-18389 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRK-0326-SM-2YUMQ 0 C1 About 8% unfixed centrally. 8.5x6.5mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 283 240 BP-18389 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.804413 106302 0.975422 0.806377 0.811562 23008 1 76 0.00221495 161 0 7.25e+07 0.0242272 611059 8.99083e+07 8.21931e+06 23038 3.58546e+07 0 0.16386 0.806377 0.654425 7.25e+07 0.00375247 1.58158e+07 5.98449e+06 1.61387e+07 167 1.61939e+07 1.2816e+07 0.00298184 1.59267e+07 49.5841 0.00679647 0.808341 0 50.5052 GTEX-OXRK-0326-SM-3NB3R 0 C1 About 8% unfixed centrally. 8.5x6.5mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 283 240 BP-18389 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98603 446600 0.973812 0.990256 0.807497 24857 1 76 0.0038102 378 0 1.17096e+08 0.0258772 928951 1.18248e+08 1.89976e+07 24896 5.81047e+07 0 0.166314 0.990256 0.799629 1.17096e+08 0.00570444 2.5585e+07 1.21746e+07 2.57879e+07 348 2.59061e+07 1.99365e+07 0.00475328 2.5939e+07 50.0317 0.00785597 0.994482 0 50.1975 GTEX-OXRK-0426-SM-2M47N 1 C1 Contains 19 nerve bundles. <10% fat. 5.8x2mm 6.4 Nerve Nerve - Tibial 0001323 287 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRK-0426-SM-2YUMT 1 C1 Contains 19 nerve bundles. <10% fat. 5.8x2mm 6.4 Nerve Nerve - Tibial 0001323 287 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.699373 138704 0.96824 0.701241 0.768368 23336 1 76 0.00234821 159 0 7.05298e+07 0.0314609 313298 1.00578e+08 9.32993e+06 23367 3.49147e+07 0 0.199872 0.701241 0.538811 7.05298e+07 0.00373339 1.54148e+07 7.60894e+06 1.56885e+07 158 1.57436e+07 1.13319e+07 0.00303896 1.55391e+07 49.673 0.00311496 0.703109 0 50.4398 GTEX-OXRK-0426-SM-3NB2E 1 C1 Contains 19 nerve bundles. <10% fat. 5.8x2mm 6.4 Nerve Nerve - Tibial 0001323 287 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 EXCLUDE 0.983227 516117 0.967849 0.988104 0.764173 24719 1 76 0.00401133 210 0 9.5925e+07 0.0318967 418218 9.70798e+07 1.66975e+07 24764 4.75424e+07 0 0.203676 0.988104 0.755083 9.5925e+07 0.00603939 2.09625e+07 1.19194e+07 2.11753e+07 213 2.12709e+07 1.49085e+07 0.00502035 2.13179e+07 50.0551 0.00430798 0.992981 0 50.2525 GTEX-OXRK-0426-SM-DKPOI 1 C1 Contains 19 nerve bundles. <10% fat. 5.8x2mm 6.4 Nerve Nerve - Tibial 0001323 287 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991693 423185 0.970284 0.993674 0.777942 24515 1 76 0.00294168 290 0 1.0538e+08 0.0294476 437981 1.06051e+08 1.19234e+07 24558 5.24702e+07 0 0.192342 0.993674 0.773021 1.0538e+08 0.00298737 2.31488e+07 1.189e+07 2.33915e+07 304 2.342e+07 1.74991e+07 0.00296448 2.33223e+07 49.8955 0.0041299 0.995655 0 50.2608 GTEX-OXRK-0526-SM-2M47L 0 C1 No lesion. 3x2mm diameter. 6.9 Blood Vessel Artery - Tibial 0007610 288 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRK-0526-SM-2YUMW 0 C1 No lesion. 3x2mm diameter. 6.9 Blood Vessel Artery - Tibial 0007610 288 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1433 06/09/2012 TruSeq.v1 EXCLUDE 0.961725 105060 0.976777 0.963334 0.827141 21112 1 76 0.00225965 198 0 8.62488e+07 0.0228264 668653 8.95316e+07 6.80666e+06 21131 4.27542e+07 0 0.149636 0.963334 0.796813 8.62488e+07 0.00336337 1.85054e+07 5.70481e+06 1.88836e+07 213 1.88862e+07 1.52776e+07 0.00281058 1.86371e+07 49.668 0.00746835 0.964944 0 50.5058 GTEX-OXRK-0526-SM-3NB2F 0 C1 No lesion. 3x2mm diameter. 6.9 Blood Vessel Artery - Tibial 0007610 288 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983594 611524 0.973921 0.988616 0.819625 22630 1 76 0.0040188 269 0 1.09196e+08 0.0256926 883011 1.10453e+08 1.97131e+07 22653 5.40976e+07 0 0.154297 0.988616 0.810294 1.09196e+08 0.00601655 2.34413e+07 1.20436e+07 2.36604e+07 265 2.37889e+07 1.91737e+07 0.0050126 2.38356e+07 50.049 0.00799443 0.993638 0 50.2325 GTEX-OXRK-0626-SM-2D44M 1 C1 Slight nodularity. 9x8.6mm 6.4 Thyroid Thyroid 0002046 291 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRK-0626-SM-2HMJ5 1 C1 Slight nodularity. 9x8.6mm 6.4 Thyroid Thyroid 0002046 291 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.880936 209859 0.963806 0.886859 0.781509 24602 1 76 0.00282384 162 0 8.00738e+07 0.0358293 1.0334e+06 9.02892e+07 1.22838e+07 24631 3.96161e+07 0 0.182297 0.886859 0.693088 8.00738e+07 0.00941972 1.73019e+07 1.22546e+07 1.76208e+07 165 1.7825e+07 1.17969e+07 0.00609975 1.75732e+07 49.6444 0.0114455 0.892783 0 50.4565 GTEX-OXRK-0826-SM-2D44K 1 C1 Early ischemic changes. 6.6 x 6.4 mm 8.6 Heart Heart - Left Ventricle 0006566 303 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRK-0826-SM-2HMK7 1 C1 Early ischemic changes. 6.6 x 6.4 mm 8.6 Heart Heart - Left Ventricle 0006566 303 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.953826 147257 0.983697 0.9606 0.867468 21776 1 76 0.00264586 268 0 1.0343e+08 0.0159871 3.15619e+06 1.07672e+08 1.48888e+07 21795 5.12032e+07 0 0.116229 0.9606 0.83329 1.0343e+08 0.00895951 2.26674e+07 1.32567e+07 2.29411e+07 288 2.32103e+07 1.88087e+07 0.00578043 2.29939e+07 49.7659 0.0293129 0.967373 0 50.3001 GTEX-OXRK-0926-SM-2D44V 1 C1 Mild-moderate emphysema; focal atelectasis. Pleura sampled 8.6 Lung Lung 0008952 305 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRK-0926-SM-2HMKP 1 C1 Mild-moderate emphysema; focal atelectasis. Pleura sampled 8.6 Lung Lung 0008952 305 240 BP-18261 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.897837 366998 0.964557 0.906671 0.799061 25538 1 76 0.00301838 214 0 1.0277e+08 0.0341049 618093 1.13349e+08 1.57047e+07 25579 5.06352e+07 0 0.165496 0.906671 0.724485 1.0277e+08 0.00957903 2.22902e+07 1.97121e+07 2.27125e+07 244 2.31313e+07 1.8218e+07 0.00626674 2.28072e+07 49.6473 0.005453 0.915505 0 50.4691 GTEX-OXRK-1326-SM-3NB1A 1 C1 Squamous epithelium 0.2 mm thick; scattered fracture defects 8.8 Esophagus Esophagus - Mucosa 0006920 314 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985727 403186 0.975249 0.989954 0.821753 23879 1 76 0.00405385 215 0 1.06897e+08 0.0243221 647292 1.07982e+08 1.78725e+07 23907 5.30678e+07 0 0.153496 0.989954 0.813498 1.06897e+08 0.00598673 2.38688e+07 1.7807e+07 2.40858e+07 238 2.42187e+07 2.11103e+07 0.00501617 2.41784e+07 49.9583 0.00599445 0.994182 0 50.2263 GTEX-OXRK-1426-SM-3NB19 1 C1 Fracture defects 7.9 Esophagus Esophagus - Muscularis 0004648 315 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986014 378750 0.974282 0.990582 0.835356 23452 1 76 0.00389771 217 0 9.86263e+07 0.0254344 995451 9.9564e+07 1.77115e+07 23471 4.89397e+07 0 0.138926 0.990582 0.827489 9.86263e+07 0.00588086 2.1203e+07 1.08585e+07 2.14682e+07 232 2.15386e+07 1.75943e+07 0.00488471 2.1554e+07 50.0179 0.0099981 0.99515 0 50.3108 GTEX-OXRK-1526-SM-E6CHJ 1 C1 Well preserved, minimal fat. 9 x 6 mm 5.5 Pancreas Pancreas 0001150 317 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99376 431555 0.978613 0.99511 0.834949 22731 1 76 0.00189837 147 0 1.0251e+08 0.0210464 436142 1.03013e+08 6.08097e+06 22753 5.10589e+07 0 0.143664 0.99511 0.830866 1.0251e+08 0.00255809 2.35223e+07 2.44804e+07 2.38902e+07 170 2.37523e+07 2.92375e+07 0.00222779 2.37933e+07 50.0432 0.00423384 0.996461 0 50.388 GTEX-OXRK-1626-SM-3NB17 2 C1 deep mucosa well preserved; surface autolyzed. 7x3mm 6.2 Stomach Stomach 0000945 318 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.972017 201892 0.981094 0.977007 0.845067 22522 1 76 0.00415035 358 0 8.32127e+07 0.0175085 1.04259e+06 8.5171e+07 1.55983e+07 22536 4.12164e+07 0 0.136028 0.977007 0.825636 8.32127e+07 0.00653841 1.90237e+07 1.26612e+08 1.96081e+07 242 1.96641e+07 2.31807e+07 0.00533828 1.93772e+07 49.6326 0.0122411 0.981997 0 50.7564 GTEX-OXRK-1726-SM-3NB16 1 C1 Well preserved. Abundant mucosa in 2 pieces; sparse mucosa in 1 7 Colon Colon - Transverse 0001157 320 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.982399 343731 0.969396 0.98711 0.788276 25015 1 76 0.00452699 212 0 9.65058e+07 0.0288007 2.00688e+06 9.77659e+07 1.65012e+07 25054 4.77821e+07 0 0.181119 0.98711 0.778116 9.65058e+07 0.00672396 2.1402e+07 1.4339e+07 2.15368e+07 223 2.16439e+07 1.40625e+07 0.00562023 2.17224e+07 50.0905 0.0205274 0.991822 0 50.1569 GTEX-OXRK-1826-SM-2D44B 1 C1 Numerous defects. 10x6.5mm 7.6 Muscle Muscle - Skeletal 0011907 322 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRK-1826-SM-2HMJE 1 C1 Numerous defects. 10x6.5mm 7.6 Muscle Muscle - Skeletal 0011907 322 240 BP-18262 RNA isolation_PAXgene Tissue miRNA 08/16/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.643824 91084 0.980448 0.649695 0.870642 19618 1 76 0.00251788 127 0 6.01805e+07 0.0193091 1.25459e+06 9.26288e+07 1.49907e+07 19624 2.96547e+07 0 0.109806 0.649695 0.565652 6.01805e+07 0.00975485 1.29186e+07 6.65226e+06 1.32469e+07 128 1.34527e+07 1.20409e+07 0.00610367 1.31982e+07 49.5225 0.0135442 0.655565 0 50.6273 GTEX-OXRL-0003-SM-2H2X2 B1 Blood Whole Blood 0013756 -63 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828063_R01C01 GTEX-OXRL-0003-SM-2XK1Q B1 Blood Whole Blood 0013756 -63 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R02C02 GTEX-OXRL-0003-SM-4X611 B1 Blood Whole Blood 0013756 -63 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-OXRL-0003-SM-5JK3X B1 Blood Whole Blood 0013756 -63 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OXRL-0005-SM-2D43N B1 8.9 Blood Whole Blood 0013756 -65 BP-18292 RNA isolation_PAXgene Blood RNA (Manual) 08/17/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRL-0005-SM-3LK6A B1 8.9 Blood Whole Blood 0013756 -65 BP-18292 RNA isolation_PAXgene Blood RNA (Manual) 08/17/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.964227 1.3611e+06 0.935975 0.965332 0.749928 19522 1 76 0.00260031 126 0 9.33713e+07 0.0634043 232007 9.67246e+07 8.67877e+06 19538 4.64035e+07 0 0.186046 0.965332 0.72393 9.33713e+07 0.00406995 2.01205e+07 9.49918e+07 2.03959e+07 161 2.04396e+07 1.88352e+07 0.00333429 2.02296e+07 49.7417 0.00239864 0.966437 0 50.3398 GTEX-OXRL-0008-SM-3NB29 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 310 BP-20433 RNA isolation_Trizol Manual (Cell Pellet) 12/01/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.987098 946354 0.967878 0.991254 0.84174 22662 1 76 0.00357043 382 0 1.20362e+08 0.0318017 468358 1.21424e+08 2.1406e+07 22686 5.97711e+07 0 0.126139 0.991254 0.834378 1.20362e+08 0.00530564 2.63446e+07 2.65344e+07 2.65963e+07 339 2.67397e+07 2.58025e+07 0.0044344 2.66886e+07 49.9522 0.00385722 0.99541 0 50.2378 GTEX-OXRL-0126-SM-2M47I 1 B1 Prominent defects along subcutaneous fat. 7.6x3.5 mm 6 Skin Skin - Sun Exposed (Lower leg) 0004264 312 852 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRL-0126-SM-2YUMP 1 B1 Prominent defects along subcutaneous fat. 7.6x3.5 mm 6 Skin Skin - Sun Exposed (Lower leg) 0004264 312 852 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.839063 88816 0.969685 0.840376 0.776216 23668 1 76 0.0021817 133 0 6.42042e+07 0.0301414 1.13246e+06 7.63994e+07 6.70016e+06 23696 3.18285e+07 0 0.193469 0.840376 0.652314 6.42042e+07 0.00381983 1.40331e+07 6.5208e+06 1.43447e+07 158 1.43126e+07 8.02082e+06 0.00299949 1.41532e+07 49.7201 0.0148229 0.84169 0 50.549 GTEX-OXRL-0226-SM-3NB18 1 B1 Central 10% hollow. 12 x 9mm 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 319 847 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985201 361129 0.973051 0.989692 0.801904 24902 1 76 0.00377626 207 0 9.48108e+07 0.0266851 456698 9.57982e+07 1.62708e+07 24935 4.70338e+07 0 0.171147 0.989692 0.793638 9.48108e+07 0.00579918 2.07525e+07 1.08126e+07 2.09203e+07 219 2.10037e+07 1.64002e+07 0.00478313 2.10762e+07 50.0861 0.00476729 0.994184 0 50.2013 GTEX-OXRL-0326-SM-2D44H 1 B1 Pericardial fat layer poorly fixed. 13x5.6mm. Possible early ischemia. 7.8 Heart Heart - Left Ventricle 0006566 250 917 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRL-0326-SM-2I3F2 1 B1 Pericardial fat layer poorly fixed. 13x5.6mm. Possible early ischemia. 7.8 Heart Heart - Left Ventricle 0006566 250 917 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.963102 104757 0.982519 0.965676 0.854158 20906 1 76 0.00225571 265 0 8.58612e+07 0.0172865 1.85989e+06 8.8913e+07 9.19374e+06 20920 4.27005e+07 0 0.128361 0.965676 0.82484 8.58612e+07 0.00349752 1.85209e+07 1.54625e+07 1.92059e+07 283 1.91562e+07 1.3676e+07 0.00287496 1.87262e+07 49.4325 0.0209181 0.968251 0 50.9078 GTEX-OXRL-0326-SM-447BG 1 B1 Pericardial fat layer poorly fixed. 13x5.6mm. Possible early ischemia. 7.8 Heart Heart - Left Ventricle 0006566 250 917 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2912 04/18/2013 TruSeq.v1 EXCLUDE 0.992142 226618 0.980934 0.994227 0.858597 20085 1 76 0.00162349 150 0 6.3405e+07 0.0188851 993620 6.37731e+07 2.99785e+06 20095 3.15631e+07 0 0.122337 0.994227 0.85364 6.3405e+07 0.0022443 1.39754e+07 9.11214e+06 1.3935e+07 177 1.39336e+07 1.01477e+07 0.00193324 1.40895e+07 50.2781 0.0155805 0.996312 0 49.9277 GTEX-OXRL-0326-SM-4MVNY 1 B1 Pericardial fat layer poorly fixed. 13x5.6mm. Possible early ischemia. 7.8 Heart Heart - Left Ventricle 0006566 250 917 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-3652 08/10/2013 TruSeq.v1 EXCLUDE 0.988748 350662 0.980993 0.992171 0.849919 20710 1 76 0.00196919 193 0 7.61314e+07 0.0188184 1.17919e+06 7.67321e+07 6.67303e+06 20718 3.78127e+07 0 0.131074 0.992171 0.843265 7.61314e+07 0.00300256 1.65717e+07 1.65516e+07 1.66696e+07 215 1.66463e+07 1.21063e+07 0.00248409 1.68152e+07 50.2523 0.0153677 0.995595 0 50.1473 GTEX-OXRL-0426-SM-3NM97 1 B1 Perimural fat =50% aliquot. 8.5mm long; wall 1.5; fat>1.5mm 7.1 Blood Vessel Artery - Aorta 0001496 240 929 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990205 360526 0.972882 0.992595 0.821166 24305 1 76 0.00374667 376 0 1.15142e+08 0.0268052 412878 1.16001e+08 2.20158e+07 24335 5.72657e+07 0 0.151716 0.992595 0.815085 1.15142e+08 0.00491669 2.50662e+07 1.15063e+07 2.51324e+07 337 2.5146e+07 1.98498e+07 0.00433027 2.53162e+07 50.1687 0.00355927 0.994986 0 50.066 GTEX-OXRL-0526-SM-2D44C 1 B1 Moderate emphysema, vascular sclerosis. Focal hemorrhage. 10x8.6mm 8.4 Lung Lung 0008952 251 926 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRL-0526-SM-2I3EZ 1 B1 Moderate emphysema, vascular sclerosis. Focal hemorrhage. 10x8.6mm 8.4 Lung Lung 0008952 251 926 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.95426 124430 0.971999 0.959021 0.810318 24435 1 76 0.00274073 209 0 8.29368e+07 0.0274216 439373 8.64807e+07 9.09239e+06 24469 4.11187e+07 0 0.161681 0.959021 0.777113 8.29368e+07 0.0041132 1.82696e+07 7.6939e+06 1.85406e+07 214 1.87064e+07 1.54283e+07 0.00342355 1.84915e+07 49.7113 0.00508059 0.963783 0 50.3681 GTEX-OXRL-0626-SM-3NM9C 1 B1 Well preserved squamous epithelium. 5.5x3.8mm 8.8 Esophagus Esophagus - Mucosa 0006920 260 901 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989882 430454 0.972593 0.9923 0.803094 24707 1 76 0.00378616 279 0 1.06121e+08 0.0269837 538108 1.06945e+08 2.10675e+07 24741 5.27863e+07 0 0.169499 0.9923 0.79691 1.06121e+08 0.00499702 2.37504e+07 1.677e+07 2.38073e+07 267 2.38634e+07 1.96225e+07 0.00439012 2.39489e+07 50.0894 0.00503165 0.994719 0 50.0598 GTEX-OXRL-0726-SM-3NM9A 1 B1 Cassette pressure marks. 9.8x5mm 8.1 Esophagus Esophagus - Muscularis 0004648 263 897 BP-18390 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989517 523689 0.972843 0.992211 0.847744 23386 1 76 0.00371929 376 0 1.1604e+08 0.026915 812859 1.16951e+08 2.37992e+07 23405 5.7694e+07 0 0.125099 0.992211 0.841141 1.1604e+08 0.00492938 2.48437e+07 1.41426e+07 2.49336e+07 340 2.49025e+07 2.0886e+07 0.00432269 2.51758e+07 50.2728 0.00695045 0.994905 0 50.0903 GTEX-OXRL-1426-SM-3NM9E 2 B1 2 of 3 with mucosa. 9.6x5.8mm 6.7 Colon Colon - Transverse 0001157 269 864 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989133 343532 0.973297 0.991991 0.833713 24498 1 76 0.00372248 376 0 1.09261e+08 0.0264565 1.077e+06 1.10143e+08 2.27473e+07 24527 5.43325e+07 0 0.139584 0.991991 0.827036 1.09261e+08 0.00500185 2.37623e+07 1.27361e+07 2.39302e+07 335 2.39526e+07 1.77654e+07 0.00436032 2.40362e+07 50.0871 0.00977822 0.99485 0 50.176 GTEX-OXRL-1526-SM-E6CHQ 1 B1 Deep glands OK; surface autolyzed. 5.5 Stomach Stomach 0000945 266 869 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.99036 248421 0.985527 0.991897 0.878752 22308 1 76 0.00175618 429 0 9.75214e+07 0.0142058 1.40594e+06 9.83181e+07 6.05917e+06 22324 4.8577e+07 0 0.106775 0.991897 0.871632 9.75214e+07 0.00239158 2.24059e+07 7.84868e+07 2.24742e+07 364 2.24575e+07 2.17821e+07 0.00207339 2.25495e+07 50.1021 0.0142999 0.993435 0 50.0761 GTEX-OXRL-1626-SM-2M47M 1 B1 Severe tissue fracture, probably fixation artifact. Plenty of good muscle otherwise. 12x9mm. 10% fat at edges. 7.9 Muscle Muscle - Skeletal 0011907 323 816 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRL-1626-SM-2YUMU 1 B1 Severe tissue fracture, probably fixation artifact. Plenty of good muscle otherwise. 12x9mm. 10% fat at edges. 7.9 Muscle Muscle - Skeletal 0011907 323 816 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.932859 150548 0.977908 0.934752 0.864066 19638 1 76 0.00185457 159 0 7.10834e+07 0.0218688 699697 7.60451e+07 5.88967e+06 19647 3.52868e+07 0 0.113842 0.934752 0.807688 7.10834e+07 0.00292566 1.53248e+07 8.62663e+06 1.57629e+07 173 1.58164e+07 1.42925e+07 0.00238903 1.53998e+07 49.3327 0.00920107 0.936646 0 50.7045 GTEX-OXRL-1826-SM-2M47K 1 B1 Minimal sclerosis. Two sections. 6 x 2.5mm 8 Blood Vessel Artery - Tibial 0007610 335 810 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRL-1826-SM-2YUMV 1 B1 Minimal sclerosis. Two sections. 6 x 2.5mm 8 Blood Vessel Artery - Tibial 0007610 335 810 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.800472 1.22082e+06 0.926897 0.801576 0.772818 21195 1 76 0.00212509 133 0 7.40722e+07 0.0726716 336545 9.24082e+07 8.72853e+06 21211 3.66639e+07 0 0.15408 0.801576 0.619472 7.40722e+07 0.0037406 1.5009e+07 4.4712e+07 1.54637e+07 152 1.54802e+07 1.3588e+07 0.00293173 1.50925e+07 49.3659 0.00364194 0.802681 0 50.7461 GTEX-OXRL-2026-SM-E6CHN 2 B1 10 x 11 mm 5.5 Prostate Prostate 0002367 284 841 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992274 306148 0.967427 0.993581 0.769713 25763 1 76 0.00197573 205 0 8.93061e+07 0.0323131 457228 8.98831e+07 5.67533e+06 25802 4.44738e+07 0 0.197714 0.993581 0.764772 8.93061e+07 0.00266921 1.952e+07 8.44115e+06 1.97058e+07 249 1.96345e+07 1.31079e+07 0.00232201 1.96987e+07 50.0816 0.00508692 0.994888 0 50.2369 GTEX-OXRL-2126-SM-3NM98 1 B1 Spermatogenesis. 12x8mm 7.2 Testis Testis 0000473 292 835 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990348 470685 0.926996 0.992429 0.734811 34099 1 76 0.00378194 220 0 1.05931e+08 0.0726417 820122 1.06739e+08 1.98282e+07 34173 5.27044e+07 0 0.192186 0.992429 0.729247 1.05931e+08 0.00489442 2.20235e+07 1.69136e+07 2.20067e+07 214 2.2118e+07 1.83044e+07 0.00433701 2.21119e+07 49.993 0.00768343 0.99451 0 49.9809 GTEX-OXRL-2626-SM-2D44F 1 B1 9.4x6.7. no lesion 6.9 Thyroid Thyroid 0002046 283 846 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRL-2626-SM-2I3F1 1 B1 9.4x6.7. no lesion 6.9 Thyroid Thyroid 0002046 283 846 BP-18391 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1167_3 04/02/2012 TruSeq.v1 RNASEQ 0.72445 161924 0.962885 0.730913 0.740653 25683 1 76 0.00338616 158 0 9.30346e+07 0.0368109 592235 1.27285e+08 3.37164e+07 25732 4.59267e+07 0 0.222231 0.730913 0.541353 9.30346e+07 0.0099695 2.00687e+07 1.12543e+07 2.02536e+07 192 2.05834e+07 1.31524e+07 0.00664872 2.04712e+07 49.8634 0.00465281 0.737376 0 50.2292 GTEX-OXRN-0003-SM-2H2X4 C1 Blood Whole Blood 0013756 514 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828063_R02C01 GTEX-OXRN-0003-SM-2XK1N C1 Blood Whole Blood 0013756 514 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R01C02 GTEX-OXRN-0003-SM-3USRW C1 Blood Whole Blood 0013756 514 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OXRN-0003-SM-5JK51 C1 Blood Whole Blood 0013756 514 BP-18295 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/17/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OXRN-0005-SM-2D43O C1 7.8 Blood Whole Blood 0013756 BP-18292 RNA isolation_PAXgene Blood RNA (Manual) 08/17/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-0005-SM-2I5EU C1 7.8 Blood Whole Blood 0013756 BP-18292 RNA isolation_PAXgene Blood RNA (Manual) 08/17/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.417747 1.21168e+06 0.936626 0.435275 0.755836 19693 1 76 0.00418218 83 0 7.97476e+07 0.0611324 332199 1.83212e+08 5.93443e+07 19699 3.80366e+07 0 0.18079 0.435275 0.328996 7.97476e+07 0.0670373 1.68302e+07 1.45447e+08 1.74427e+07 104 1.88451e+07 1.81729e+07 0.0343442 1.84455e+07 49.4641 0.00181319 0.452803 0 50.8935 GTEX-OXRN-0011-R10A-SM-2I5GC C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 514 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.951096 1.25117e+06 0.930889 0.958703 0.790798 24778 1 76 0.00309718 267 0 1.10892e+08 0.068743 9.06524e+06 1.15669e+08 2.21497e+07 24798 5.48369e+07 0 0.140091 0.958703 0.75814 1.10892e+08 0.0103007 2.29143e+07 6.64929e+07 2.39304e+07 301 2.39102e+07 9.63085e+06 0.00667036 2.3567e+07 49.6385 0.0783725 0.96631 0 51.0845 GTEX-OXRN-0011-R10A-SM-2M49E C1, A1 7.4 Brain Brain - Frontal Cortex (BA9) 0009834 514 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRN-0011-R10a-SM-AHZM9 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 514 ChIP-Seq GTEX-OXRN-0011-R5A-SM-2D45L C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 514 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-0011-R5A-SM-2I5EF C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 514 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.759376 1.09956e+06 0.919994 0.763677 0.772585 22336 1 76 0.00296655 115 0 7.07647e+07 0.0797 7.86843e+06 9.2663e+07 2.30685e+07 22349 3.50306e+07 0 0.147409 0.763677 0.590005 7.07647e+07 0.0103536 1.43809e+07 6.31758e+07 1.5141e+07 163 1.50922e+07 4.8129e+06 0.00663926 1.46378e+07 49.2357 0.0849144 0.767979 0 51.2873 GTEX-OXRN-0011-R8A-SM-2D45Q C1, A1 5.3 Brain Brain - Hypothalamus 0001898 514 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-0011-R8A-SM-E9TI1 C1, A1 5.7 Brain Brain - Hypothalamus 0001898 514 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-10741 04/06/2017 TruSeq.v1 RNASEQ 0.982952 189505 0.978999 0.985087 0.856124 20157 1 76 0.00202047 184 0 5.60447e+07 0.0209161 7.91382e+06 5.68931e+07 2.38643e+06 20165 2.78866e+07 0 0.122875 0.985087 0.843356 5.60447e+07 0.00262543 1.2287e+07 1.94333e+07 1.26006e+07 205 1.2399e+07 2.75813e+06 0.00232229 1.25798e+07 50.3619 0.1391 0.987222 0 50.63 GTEX-OXRN-0126-SM-48TDM 1 C1 Hollow defects in dermal fat. 8.6 Skin Skin - Sun Exposed (Lower leg) 0004264 572 364 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990559 353925 0.968843 0.992432 0.803409 22894 1 76 0.00183183 179 0 6.99902e+07 0.0309157 500280 7.05239e+07 3.63711e+06 22918 3.48433e+07 0 0.165433 0.992432 0.797329 6.99902e+07 0.00252321 1.52734e+07 9.34074e+06 1.53403e+07 168 1.53768e+07 1.21928e+07 0.00217686 1.53698e+07 49.9886 0.00709377 0.994306 0 50.1092 GTEX-OXRN-0226-SM-2D44T 1 C1 Central 30% unfixed zone 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 574 363 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-0226-SM-2I5EJ 1 C1 Central 30% unfixed zone 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 574 363 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.874072 176130 0.975595 0.880115 0.814114 24330 1 76 0.0029985 213 0 9.4714e+07 0.0240492 568700 1.07615e+08 2.08919e+07 24351 4.68504e+07 0 0.161481 0.880115 0.716514 9.4714e+07 0.0103411 2.05949e+07 1.12942e+07 2.10226e+07 209 2.12592e+07 1.7126e+07 0.00664459 2.0956e+07 49.6409 0.00528456 0.886159 0 50.5139 GTEX-OXRN-0526-SM-2D44N 1 C1 Mild fibrosis and congestion. 11x6.6mm 5.1 Lung Lung 0008952 701 240 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-0526-SM-2I5EN 1 C1 Mild fibrosis and congestion. 11x6.6mm 5.1 Lung Lung 0008952 701 240 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.860083 221031 0.969961 0.865025 0.743391 23944 1 76 0.00332766 131 0 8.55201e+07 0.0296935 1.6782e+06 9.88643e+07 2.00466e+07 23987 4.23364e+07 0 0.226569 0.865025 0.643052 8.55201e+07 0.0107748 1.87681e+07 1.48011e+07 1.8962e+07 164 1.90826e+07 1.14379e+07 0.00702994 1.90946e+07 50.0157 0.0169747 0.869968 0 50.257 GTEX-OXRN-1226-SM-2D44Q 1 C1 Artery with 60% occlusion by atheromatous plaque 6 Blood Vessel Artery - Tibial 0007610 721 241 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-1226-SM-2I5EL 1 C1 Artery with 60% occlusion by atheromatous plaque 6 Blood Vessel Artery - Tibial 0007610 721 241 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.953312 193878 0.969121 0.959224 0.760951 25552 1 76 0.00315235 207 0 1.04339e+08 0.0305713 697764 1.08774e+08 1.96231e+07 25605 5.16729e+07 0 0.208171 0.959224 0.729922 1.04339e+08 0.0101727 2.27428e+07 1.23529e+07 2.28577e+07 228 2.30516e+07 1.57247e+07 0.00664089 2.31317e+07 50.0867 0.0064148 0.965136 0 50.126 GTEX-OXRN-1326-SM-3LK5V 1 C1 ~10% intramuscular fat 7.3 Muscle Muscle - Skeletal 0011907 733 240 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.97459 217505 0.979544 0.975482 0.869844 21108 1 76 0.00207358 276 0 9.97779e+07 0.0202024 1.59317e+06 1.02286e+08 9.11415e+06 21124 4.96261e+07 0 0.1097 0.975482 0.848517 9.97779e+07 0.00318327 2.17792e+07 1.06094e+07 2.19669e+07 323 2.19764e+07 2.00952e+07 0.00262792 2.18498e+07 49.8556 0.0155757 0.976375 0 50.2145 GTEX-OXRN-1326-SM-CYKP9 1 C1 ~10% intramuscular fat 7.3 Muscle Muscle - Skeletal 0011907 733 240 BP-18407 RNA isolation_PAXgene Tissue miRNA 08/22/2011 RIP-Seq GTEX-OXRN-1426-SM-3LK5U 1 C1 13 nerve bundles; 20% fat. 3.7x3mm 6.3 Nerve Nerve - Tibial 0001323 731 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.972355 287306 0.971656 0.973036 0.764133 24369 1 76 0.00241289 288 0 9.79112e+07 0.0280375 387527 1.00624e+08 9.3443e+06 24409 4.86439e+07 0 0.207523 0.973036 0.743529 9.79112e+07 0.00347002 2.1566e+07 1.19267e+07 2.17406e+07 271 2.17561e+07 1.5769e+07 0.00294108 2.16215e+07 49.8449 0.00385122 0.973718 0 50.2016 GTEX-OXRN-1526-SM-2D44J 1 C1 Focal fibrosis, 20%. 9x7 mm 5.4 Thyroid Thyroid 0002046 735 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRN-1526-SM-E6CHM 1 C1 Focal fibrosis, 20%. 9x7 mm 5.5 Thyroid Thyroid 0002046 735 240 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.992357 242859 0.970617 0.993564 0.749698 23692 1 76 0.00195519 164 0 8.13971e+07 0.0291068 538354 8.19244e+07 4.79489e+06 23725 4.05369e+07 0 0.220918 0.993564 0.744873 8.13971e+07 0.00277902 1.78774e+07 8.20501e+06 1.80331e+07 183 1.79455e+07 1.34318e+07 0.00236661 1.80549e+07 50.1519 0.00657135 0.99477 0 50.2167 GTEX-OXRN-1726-SM-3NM9B 1 C1 Well preserved squamous layer. 9.5x1.7mm 6.8 Esophagus Esophagus - Mucosa 0006920 748 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990159 317604 0.972073 0.99265 0.804169 22864 1 76 0.00397269 372 0 1.12795e+08 0.0276496 2.04946e+06 1.13631e+08 2.22439e+07 22893 5.61157e+07 0 0.167903 0.99265 0.798258 1.12795e+08 0.00516967 2.51294e+07 1.82035e+07 2.52776e+07 337 2.53004e+07 1.59548e+07 0.00456968 2.53822e+07 50.0807 0.0180362 0.99514 0 50.147 GTEX-OXRN-2026-SM-E6CHK 3 C1 Severely autolyzed mucosa 5.7 Colon Colon - Transverse 0001157 757 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-10507 03/25/2017 TruSeq.v1 RNASEQ 0.993282 281595 0.976809 0.994451 0.84355 23459 1 76 0.00199921 276 0 9.06378e+07 0.0224165 626861 9.11436e+07 5.72693e+06 23476 4.51252e+07 0 0.133259 0.994451 0.838869 9.06378e+07 0.00251854 1.96979e+07 8.05113e+06 1.98852e+07 279 1.98063e+07 1.69041e+07 0.00225857 1.98717e+07 50.0825 0.00687773 0.99562 0 50.2366 GTEX-OXRN-2426-SM-2I5EQ 1 C1 4.9x4.4mm 7.2 Brain Brain - Cortex 0001870 786 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.678089 421463 0.954247 0.681594 0.817822 22698 1 76 0.00296983 114 0 6.47622e+07 0.0452212 5.13092e+06 9.50158e+07 2.14051e+07 22710 3.20127e+07 0 0.136425 0.681594 0.557422 6.47622e+07 0.0106235 1.37938e+07 2.40628e+07 1.43194e+07 150 1.43072e+07 6.04823e+06 0.00677699 1.40363e+07 49.5221 0.0540007 0.685098 0 50.9348 GTEX-OXRN-2426-SM-2M48I 1 C1 4.9x4.4mm 7.2 Brain Brain - Cortex 0001870 786 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRN-2626-SM-48TBX 2 C1 Anterior pituitary. 6.5x5.7mm 5.9 Pituitary Pituitary 0000007 787 240 BP-18408 RNA isolation_PAXgene Tissue miRNA 08/22/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989896 348361 0.960609 0.991639 0.745062 24225 1 76 0.00187975 126 0 6.51608e+07 0.0391801 804728 6.57103e+07 3.50248e+06 24259 3.24227e+07 0 0.215547 0.991639 0.738832 6.51608e+07 0.00260607 1.38332e+07 8.25768e+06 1.39105e+07 149 1.39405e+07 9.42142e+06 0.00224227 1.3918e+07 49.9595 0.0122466 0.993382 0 50.1394 GTEX-OXRO-0003-SM-2H2X6 D1 Blood Whole Blood 0013756 809 BP-18340 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828063_R03C01 GTEX-OXRO-0003-SM-2XK2O D1 Blood Whole Blood 0013756 809 BP-18340 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R04C02 GTEX-OXRO-0003-SM-3USSA D1 Blood Whole Blood 0013756 809 BP-18340 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/18/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OXRO-0003-SM-5JK2R D1 Blood Whole Blood 0013756 809 BP-18340 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/15/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OXRO-0006-SM-2D44O D1 7.9 Blood Whole Blood 0013756 809 BP-18358 RNA isolation_PAXgene Blood RNA (Manual) 08/19/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRO-0006-SM-2I5EM D1 7.9 Blood Whole Blood 0013756 809 BP-18358 RNA isolation_PAXgene Blood RNA (Manual) 08/19/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.905614 432972 0.968622 0.910805 0.793737 19278 1 76 0.00317301 115 0 8.18991e+07 0.0301726 718517 8.99195e+07 1.78033e+07 19287 4.05602e+07 0 0.174885 0.910805 0.722939 8.18991e+07 0.0111033 1.86248e+07 9.53257e+07 1.90899e+07 133 1.92377e+07 1.87744e+07 0.00711556 1.89376e+07 49.607 0.00799067 0.915995 0 50.6166 GTEX-OXRO-0011-R10A-SM-2D45I D1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRO-0011-R10A-SM-2I5EH D1, A1 6.1 Brain Brain - Frontal Cortex (BA9) 0009834 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.963202 2.34588e+06 0.902996 0.971112 0.759564 24007 1 76 0.00282485 269 0 1.27983e+08 0.0966138 2.03701e+07 1.31791e+08 2.30436e+07 24031 6.33003e+07 0 0.143431 0.971112 0.737622 1.27983e+08 0.00934325 2.56556e+07 1.30618e+08 2.70997e+07 293 2.69018e+07 7.31961e+06 0.00605751 2.65213e+07 49.6438 0.154564 0.979021 0 51.3686 GTEX-OXRO-0011-R10a-SM-AHZ7U D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 825 ChIP-Seq GTEX-OXRO-0011-R2A-SM-3NB1W D1, A1 6.3 Brain Brain - Substantia nigra 0002038 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985012 522035 0.95946 0.989814 0.842366 22519 1 76 0.00394808 375 0 1.01166e+08 0.0403792 1.86069e+07 1.02208e+08 1.79995e+07 22543 5.01956e+07 0 0.117094 0.989814 0.833786 1.01166e+08 0.0059574 2.21456e+07 3.02343e+07 2.28754e+07 407 2.25305e+07 8.10358e+06 0.00494786 2.29286e+07 50.4378 0.182051 0.994616 0 50.8106 GTEX-OXRO-0011-R5A-SM-2D45J D1, A1 5.3 Brain Brain - Caudate (basal ganglia) 0001873 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRO-0011-R5A-SM-2I5EG D1, A1 5.3 Brain Brain - Caudate (basal ganglia) 0001873 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.866677 614132 0.950944 0.873626 0.82416 19444 1 76 0.00286104 111 0 6.19384e+07 0.0489623 1.26785e+07 7.08981e+07 1.53781e+07 19449 3.0623e+07 0 0.126785 0.873626 0.720008 6.19384e+07 0.0101622 1.2904e+07 4.18085e+07 1.38422e+07 162 1.37064e+07 2.47045e+06 0.00648257 1.32935e+07 49.2355 0.178827 0.880576 0 51.7539 GTEX-OXRO-0011-R9A-SM-3NB1X D1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984642 638835 0.957815 0.989278 0.820945 23327 1 76 0.00384848 382 0 1.08615e+08 0.041904 1.26922e+07 1.09792e+08 1.9237e+07 23350 5.38775e+07 0 0.13687 0.989278 0.812142 1.08615e+08 0.0056733 2.3875e+07 3.02281e+07 2.46046e+07 382 2.43828e+07 1.09169e+07 0.00475661 2.45628e+07 50.1838 0.115602 0.993914 0 50.7525 GTEX-OXRO-0011-R9A-SM-5S2RR D1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-4988,LCSET-5335 04/11/2014 TruSeq.v1 EXCLUDE 0.981997 362340 0.961112 0.983495 0.821487 21725 1 76 0.00186776 278 0 7.71351e+07 0.0385662 8.24711e+06 7.84296e+07 4.15987e+06 21736 3.83686e+07 0 0.139625 0.983495 0.807928 7.71351e+07 0.00273747 1.7146e+07 1.84142e+07 1.74998e+07 280 1.7143e+07 7.49381e+06 0.00230195 1.7607e+07 50.6675 0.105153 0.984992 0 50.5105 GTEX-OXRO-0011-R9A-SM-5S2W3 D1, A1 6.1 Brain Brain - Spinal cord (cervical c-1) 0006469 825 BP-19075 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.99072 428236 0.959287 0.993329 0.823048 21907 1 76 0.00193874 282 0 8.24238e+07 0.0404855 9.66188e+06 8.29773e+07 8.66212e+06 21927 4.10171e+07 0 0.136239 0.993329 0.817558 8.24238e+07 0.00314204 1.8346e+07 2.20436e+07 1.85385e+07 330 1.82966e+07 7.9556e+06 0.00253881 1.88009e+07 50.6797 0.11644 0.995939 0 50.261 GTEX-OXRO-0126-SM-2M48E 1 D1 3 pieces 9.5x1.8mm. Epidermis 30um 7 Skin Skin - Sun Exposed (Lower leg) 0004264 835 1179 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRO-0126-SM-2YUN4 1 D1 3 pieces 9.5x1.8mm. Epidermis 30um 7 Skin Skin - Sun Exposed (Lower leg) 0004264 835 1179 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.784498 149857 0.973347 0.786339 0.760311 24715 1 76 0.00229981 219 0 9.03911e+07 0.0263848 442519 1.14952e+08 1.04954e+07 24754 4.47227e+07 0 0.213036 0.786339 0.597862 9.03911e+07 0.00400591 1.98179e+07 9.39943e+06 2.01492e+07 230 2.02249e+07 1.48809e+07 0.00315086 1.99434e+07 49.6496 0.0038496 0.78818 0 50.4145 GTEX-OXRO-0226-SM-3LK6F 2 D1 Large 16x12.8 aliquot. Most appears empty with central unfixed spaces 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 838 1176 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.963552 186469 0.972475 0.964679 0.766622 23419 1 76 0.00244278 165 0 7.95148e+07 0.0272137 333940 8.24262e+07 7.9008e+06 23451 3.95044e+07 0 0.205853 0.964679 0.739544 7.95148e+07 0.00367094 1.7395e+07 8.99208e+06 1.75321e+07 184 1.75649e+07 1.29501e+07 0.00305615 1.74502e+07 49.8362 0.00405138 0.965806 0 50.1963 GTEX-OXRO-0326-SM-2D45W 1 D1 Alveolar exudates. 10x10mm 6.1 Lung Lung 0008952 845 1169 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRO-0326-SM-2I5EE 1 D1 Alveolar exudates. 10x10mm 6.1 Lung Lung 0008952 845 1169 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.399911 202320 0.964735 0.418223 0.720448 24584 1 76 0.00409269 95 0 7.37781e+07 0.0340154 544159 1.76408e+08 6.09066e+07 24608 3.50829e+07 0 0.244287 0.418223 0.301308 7.37781e+07 0.0685604 1.53199e+07 1.40293e+07 1.5734e+07 102 1.72026e+07 1.04458e+07 0.0349152 1.68303e+07 49.453 0.00308466 0.436536 0 50.6667 GTEX-OXRO-0326-SM-33HBM 1 D1 Alveolar exudates. 10x10mm 6.1 Lung Lung 0008952 845 1169 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.743478 213566 0.970248 0.748794 0.714853 24879 1 76 0.00250436 156 0 8.76568e+07 0.0294433 514394 1.17064e+08 1.56854e+07 24925 4.32784e+07 0 0.255394 0.748794 0.535277 8.76568e+07 0.00726234 1.91587e+07 8.13184e+06 1.93932e+07 183 1.96369e+07 1.20425e+07 0.00486646 1.95108e+07 49.839 0.00439412 0.754109 0 50.3041 GTEX-OXRO-0726-SM-E9U4C 3 D1 Mucosa, 1 wall. Three pieces: 9.5x1.9mm. Moderate fracture 5.9 Colon Colon - Transverse 0001157 860 1154 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-10742,LCSET-10946 05/03/2017 TruSeq.v1 RNASEQ 0.986498 447183 0.967736 0.987608 0.78235 24995 1 76 0.0027108 375 0 1.05398e+08 0.0296293 1.92012e+06 1.0672e+08 5.17705e+06 25027 5.23538e+07 0 0.185386 0.987608 0.772655 1.05398e+08 0.00368512 2.32206e+07 1.57895e+07 2.32795e+07 332 2.33007e+07 1.62859e+07 0.00319741 2.33138e+07 50.0141 0.0179921 0.988718 0 50.0633 GTEX-OXRO-1226-SM-48TDL 2 D1 12x12mm. Moderate fractures. Foci of microadenosis 7.1 Thyroid Thyroid 0002046 880 1134 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.988616 289227 0.964256 0.990893 0.770138 23076 1 76 0.00185321 142 0 6.9265e+07 0.035501 1.56864e+06 6.99015e+07 3.77155e+06 23101 3.44563e+07 0 0.194118 0.990893 0.763125 6.9265e+07 0.0025813 1.51826e+07 1.01038e+07 1.52435e+07 160 1.52983e+07 1.13172e+07 0.00221642 1.52873e+07 49.982 0.0224408 0.993171 0 50.1 GTEX-OXRO-1726-SM-2D45U 1 D1 Severe atrophy, fibrosis, and fatty infiltration (>50%) with scattered hypertrophic fibers. 14.4x6.8mm. 6.4 Muscle Muscle - Skeletal 0011907 832 1182 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRO-1726-SM-3LK6C 1 D1 Severe atrophy, fibrosis, and fatty infiltration (>50%) with scattered hypertrophic fibers. 14.4x6.8mm. 6.4 Muscle Muscle - Skeletal 0011907 832 1182 BP-18448 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.981835 307053 0.956444 0.982862 0.732345 25783 1 76 0.00227455 274 0 1.13111e+08 0.0433011 687013 1.15084e+08 1.07389e+07 25833 5.62191e+07 0 0.224098 0.982862 0.719795 1.13111e+08 0.00328054 2.42619e+07 1.35408e+07 2.4448e+07 310 2.45001e+07 1.82387e+07 0.00277702 2.43219e+07 49.8175 0.00596968 0.983889 0 50.191 GTEX-OXRO-1926-SM-2M488 1 D1 2 pieces: 4.9x3.4mm; 3.5x1.4mm 6.1 Blood Vessel Artery - Tibial 0007610 838 1176 BP-18450 RNA isolation_PAXgene Tissue miRNA 08/23/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRO-1926-SM-2S1O3 1 D1 2 pieces: 4.9x3.4mm; 3.5x1.4mm 6.1 Blood Vessel Artery - Tibial 0007610 838 1176 BP-18450 RNA isolation_PAXgene Tissue miRNA 08/23/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.496478 38789 0.972257 0.498588 0.771847 19381 1 76 0.00458363 104 0 3.31504e+07 0.0274117 140632 6.64884e+07 2.3676e+07 19389 1.63656e+07 0 0.20041 0.498588 0.384834 3.31504e+07 0.00893597 7.12326e+06 3.60394e+06 7.33113e+06 102 7.38075e+06 5.48727e+06 0.00675059 7.2034e+06 49.392 0.00211514 0.500699 0 50.7191 GTEX-OXRO-2026-SM-2M484 1 D1 11x11mm. Moderate fractures. 5.1 Heart Heart - Left Ventricle 0006566 848 1166 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRO-2026-SM-2YUMZ 1 D1 11x11mm. Moderate fractures. 5.1 Heart Heart - Left Ventricle 0006566 848 1166 BP-20384 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1433 06/09/2012 TruSeq.v1 RNASEQ 0.941998 152396 0.981731 0.946574 0.875333 18745 1 76 0.00199745 365 0 7.65489e+07 0.0182199 1.34559e+07 8.08694e+07 6.53604e+06 18755 3.78425e+07 0 0.106398 0.946574 0.828567 7.65489e+07 0.00313761 1.68023e+07 1.66064e+07 1.78331e+07 357 1.76366e+07 3.84095e+06 0.00256477 1.72754e+07 49.4827 0.166391 0.951149 0 51.4881 GTEX-OXRP-0003-SM-2H2X8 C1 Blood Whole Blood 0013756 993 BP-18401 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/22/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828063_R04C01 GTEX-OXRP-0003-SM-2XJZW C1 Blood Whole Blood 0013756 993 BP-18401 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/22/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R01C01 GTEX-OXRP-0003-SM-3USRP C1 Blood Whole Blood 0013756 993 BP-18401 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/22/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-OXRP-0003-SM-5JK3P C1 Blood Whole Blood 0013756 993 BP-18401 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/22/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-OXRP-0006-SM-2I3FN C1 7.2 Blood Whole Blood 0013756 BP-18415 RNA isolation_PAXgene Blood RNA (Manual) 08/22/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.927505 655410 0.967027 0.931026 0.800336 17614 1 76 0.00268583 117 0 8.72944e+07 0.032167 442722 9.37616e+07 1.03914e+07 17618 4.33374e+07 0 0.166691 0.931026 0.745133 8.72944e+07 0.00415988 1.99209e+07 1.21642e+08 2.0514e+07 149 2.0631e+07 2.24871e+07 0.00342007 2.01347e+07 49.3912 0.00472178 0.934546 0 50.7334 GTEX-OXRP-0006-SM-2IZIO C1 7.2 Blood Whole Blood 0013756 BP-18415 RNA isolation_PAXgene Blood RNA (Manual) 08/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-OXRP-0126-SM-3NB32 1 C1 3 pieces. Epidermis is 1.5-2.5% of total specimen thickness (~1.5mm) 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1063 240 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985271 636610 0.9699 0.989709 0.801332 25675 1 76 0.00388813 393 0 1.18367e+08 0.0297315 476172 1.19597e+08 2.0338e+07 25717 5.87147e+07 0 0.168568 0.989709 0.793086 1.18367e+08 0.0057805 2.56326e+07 1.96336e+07 2.57805e+07 334 2.59325e+07 2.11196e+07 0.00483008 2.59908e+07 50.0561 0.00398146 0.994147 0 50.1439 GTEX-OXRP-0126-SM-48TDI 1 C1 3 pieces. Epidermis is 1.5-2.5% of total specimen thickness (~1.5mm) 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 1063 240 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.989392 233863 0.974567 0.991879 0.82176 22342 1 76 0.00176779 139 0 5.64817e+07 0.0251663 199871 5.69441e+07 3.00904e+06 22363 2.80959e+07 0 0.152807 0.991879 0.815087 5.64817e+07 0.0025648 1.23376e+07 6.34107e+06 1.23846e+07 137 1.24419e+07 1.05397e+07 0.0021653 1.2417e+07 49.9499 0.00350995 0.994366 0 50.095 GTEX-OXRP-0226-SM-3NB14 1 C1 10x7mm aliquot. Small central area is under-fixed. 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1065 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.982857 323592 0.971569 0.987544 0.758942 24569 1 76 0.00400143 212 0 1.04207e+08 0.0280684 621567 1.05521e+08 1.86404e+07 24611 5.16586e+07 0 0.212627 0.987544 0.749489 1.04207e+08 0.00601343 2.28681e+07 1.25869e+07 2.2986e+07 240 2.31034e+07 1.5572e+07 0.00500266 2.32148e+07 50.1203 0.00589043 0.992231 0 50.1286 GTEX-OXRP-0226-SM-48TDH 1 C1 10x7mm aliquot. Small central area is under-fixed. 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 1065 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.990711 163029 0.974156 0.992031 0.784507 21496 1 76 0.00182483 117 0 5.29994e+07 0.0255275 326104 5.34251e+07 2.637e+06 21522 2.63935e+07 0 0.189649 0.992031 0.778255 5.29994e+07 0.00244117 1.16918e+07 5.13571e+06 1.17434e+07 131 1.17548e+07 8.14801e+06 0.00213259 1.17485e+07 49.9865 0.00610394 0.993351 0 50.1101 GTEX-OXRP-0326-SM-2D444 1 C1 8x5mm. Regressive changes/fibrosis 5.9 Thyroid Thyroid 0002046 1068 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRP-0326-SM-2I5ET 1 C1 8x5mm. Regressive changes/fibrosis 5.9 Thyroid Thyroid 0002046 1068 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.277162 226957 0.958827 0.288568 0.768968 22515 1 76 0.00380448 103 0 5.37161e+07 0.040066 509443 1.86147e+08 5.79735e+07 22530 2.55915e+07 0 0.189859 0.288568 0.2219 5.37161e+07 0.0664966 1.1087e+07 1.56536e+07 1.14363e+07 107 1.23691e+07 8.37108e+06 0.0339115 1.2086e+07 49.4213 0.00273678 0.299974 0 50.7754 GTEX-OXRP-0326-SM-33HBJ 1 C1 8x5mm. Regressive changes/fibrosis 5.9 Thyroid Thyroid 0002046 1068 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.89176 269406 0.972749 0.896174 0.783581 24593 1 76 0.00239237 274 0 1.21398e+08 0.0268898 685137 1.35463e+08 1.44921e+07 24632 6.00858e+07 0 0.189168 0.896174 0.702225 1.21398e+08 0.00774401 2.66208e+07 1.43155e+07 2.69384e+07 290 2.71613e+07 2.02686e+07 0.00505501 2.69689e+07 49.8223 0.00505774 0.900588 0 50.2965 GTEX-OXRP-0326-SM-5SI7J 1 C1 8x5mm. Regressive changes/fibrosis 5.9 Thyroid Thyroid 0002046 1068 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.9896 272624 0.973753 0.992403 0.79335 22818 1 76 0.00197648 159 0 7.47173e+07 0.0259522 411410 7.52893e+07 7.26316e+06 22849 3.71519e+07 0 0.180403 0.992403 0.787323 7.47173e+07 0.00310318 1.64816e+07 8.40745e+06 1.65695e+07 176 1.65925e+07 1.28974e+07 0.00253824 1.66671e+07 50.1122 0.00546439 0.995206 0 50.133 GTEX-OXRP-0526-SM-2D441 2 C1 9x8mm. Emphysema-moderate/severe. Foci of chronic interstitial inflammation, non-specific 6.3 Lung Lung 0008952 1072 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-OXRP-0526-SM-2I3EW 2 C1 9x8mm. Emphysema-moderate/severe. Foci of chronic interstitial inflammation, non-specific 6.3 Lung Lung 0008952 1072 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.813242 100172 0.974313 0.817311 0.776577 23977 1 76 0.00299213 139 0 7.50156e+07 0.0244303 232231 9.17833e+07 1.1903e+07 24009 3.71277e+07 0 0.197737 0.817311 0.634705 7.50156e+07 0.00459725 1.64867e+07 8.52940e+06 1.66857e+07 155 1.68412e+07 1.36216e+07 0.00379069 1.66885e+07 49.7723 0.00253021 0.821381 0 50.3 GTEX-OXRP-0926-SM-48TC1 1 C1 3 10x1mm pieces. Mucosa is ~10% of specimen thickness 5.9 Esophagus Esophagus - Mucosa 0006920 1082 240 BP-18483 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.98178 171805 0.967816 0.983498 0.7948 21845 1 76 0.00179518 157 0 7.0718e+07 0.0320162 921602 7.19045e+07 3.83425e+06 21862 3.52129e+07 0 0.173016 0.983498 0.781685 7.0718e+07 0.00246197 1.56202e+07 9.16115e+06 1.57371e+07 190 1.57361e+07 9.63884e+06 0.00212799 1.57401e+07 50.0063 0.012817 0.985217 0 50.1864 GTEX-OXRP-2326-SM-2M476 1 C1 7.4x 4.5mm & 5.3x3.4mm. Sparse interfibrillar fat, a few foci of which are under fixed 8 Muscle Muscle - Skeletal 0011907 1113 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRP-2326-SM-2S1NL 1 C1 7.4x 4.5mm & 5.3x3.4mm. Sparse interfibrillar fat, a few foci of which are under fixed 8 Muscle Muscle - Skeletal 0011907 1113 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.432747 46998 0.980969 0.435685 0.880532 16491 1 76 0.00407823 86 0 3.03292e+07 0.018754 207583 6.96126e+07 2.55345e+07 16495 1.49499e+07 0 0.100436 0.435685 0.383635 3.03292e+07 0.00969646 6.31809e+06 3.99134e+06 6.56683e+06 98 6.64791e+06 6.71332e+06 0.0068684 6.42066e+06 49.1305 0.00298197 0.438623 0 50.9652 GTEX-OXRP-2426-SM-2M47D 1 C1 4.7x1.5mm. Good clean specimen, minimal atherosclerotic damage 6.5 Blood Vessel Artery - Tibial 0007610 1115 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRP-2426-SM-2S1NR 1 C1 4.7x1.5mm. Good clean specimen, minimal atherosclerotic damage 6.5 Blood Vessel Artery - Tibial 0007610 1115 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.381288 50265 0.967168 0.38382 0.759604 18927 1 76 0.0047009 99 0 2.45806e+07 0.0324891 145450 6.40419e+07 2.52901e+07 18937 1.20773e+07 0 0.207565 0.38382 0.291551 2.45806e+07 0.00966952 5.24757e+06 4.06335e+06 5.37371e+06 104 5.43504e+06 3.84312e+06 0.00716882 5.33241e+06 49.5234 0.00227117 0.386352 0 50.5938 GTEX-OXRP-2526-SM-2M47A 1 C1 4.5x2.7mm nerve with surrounding rim of fat .2-.8mm in thickness 6.8 Nerve Nerve - Tibial 0001323 1116 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-OXRP-2526-SM-2S1NO 1 C1 4.5x2.7mm nerve with surrounding rim of fat .2-.8mm in thickness 6.8 Nerve Nerve - Tibial 0001323 1116 240 BP-18484 RNA isolation_PAXgene Tissue miRNA 08/25/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.391178 67712 0.96417 0.394038 0.730422 20632 1 76 0.00461497 122 0 3.0279e+07 0.035518 123218 7.6843e+07 2.70664e+07 20656 1.48862e+07 0 0.233748 0.394038 0.287814 3.0279e+07 0.00942457 6.54854e+06 4.66272e+06 6.69325e+06 111 6.77567e+06 4.34105e+06 0.00700232 6.67054e+06 49.609 0.0016035 0.396897 0 50.5464 GTEX-P44G-0006-SM-2TC6A C1 8.4 Blood Whole Blood 0013756 BP-18415 RNA isolation_PAXgene Blood RNA (Manual) 08/22/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.540477 627379 0.93873 0.545136 0.765963 17884 1 76 0.00341043 90 0 5.16161e+07 0.0602734 281568 9.46847e+07 2.22172e+07 17887 2.54425e+07 0 0.172767 0.545136 0.417554 5.16161e+07 0.018983 1.13107e+07 7.08317e+07 1.15221e+07 106 1.16776e+07 1.14951e+07 0.0111302 1.15834e+07 49.7975 0.00297374 0.549796 0 50.4629 GTEX-P44G-0011-R10A-SM-2I3FF C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.927605 763384 0.936828 0.929051 0.804456 23884 1 76 0.00241149 268 0 9.03696e+07 0.0625799 3.74668e+06 9.72709e+07 9.76447e+06 23905 4.49676e+07 0 0.132372 0.929051 0.747381 9.03696e+07 0.00368595 1.90883e+07 3.83679e+07 1.96786e+07 286 1.96804e+07 1.13666e+07 0.00304773 1.92065e+07 49.3907 0.038518 0.930496 0 50.7615 GTEX-P44G-0011-R11A-SM-2D45R C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R11A-SM-2I3FD C1, A1 8.4 Brain Brain - Cerebellar Hemisphere 0002037 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.977222 212414 0.949942 0.981261 0.740297 23772 1 76 0.00272748 268 0 9.48799e+07 0.0494933 1.62743e+06 9.66917e+07 9.32229e+06 23816 4.70649e+07 0 0.209645 0.981261 0.726425 9.48799e+07 0.00384819 2.04474e+07 1.14847e+07 2.06607e+07 266 2.08246e+07 1.2555e+07 0.00328553 2.06305e+07 49.7659 0.0168311 0.985301 0 50.2595 GTEX-P44G-0011-R1A-SM-2D45S C1, A1 7.3 Brain Brain - Hippocampus 0001954 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R1A-SM-2I3FE C1, A1 7.3 Brain Brain - Hippocampus 0001954 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.954591 197831 0.967042 0.962856 0.849741 23490 1 76 0.00252878 269 0 8.32438e+07 0.0326163 6.30143e+06 8.64551e+07 8.53886e+06 23503 4.11259e+07 0 0.117301 0.962856 0.818178 8.32438e+07 0.00378172 1.7942e+07 1.44139e+07 1.85493e+07 285 1.87343e+07 8.65891e+06 0.00314987 1.83679e+07 49.5061 0.0728868 0.97112 0 50.8321 GTEX-P44G-0011-R2A-SM-2XCD2 C1, A1 6.5 Brain Brain - Substantia nigra 0002038 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.912809 336472 0.952729 0.91847 0.830662 22017 1 76 0.00291556 129 0 5.57362e+07 0.0470363 4.37079e+06 6.06837e+07 7.11662e+06 22030 2.76276e+07 0 0.122067 0.91847 0.762939 5.57362e+07 0.0128269 1.21556e+07 1.47016e+07 1.23831e+07 152 1.23515e+07 5.57588e+06 0.00784068 1.24958e+07 50.2902 0.0720257 0.924131 0 50.4635 GTEX-P44G-0011-R2A-SM-2XV51 C1, A1 6.5 Brain Brain - Substantia nigra 0002038 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R3A-SM-2I3FC C1, A1 7.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.943779 197940 0.963777 0.948114 0.845032 23615 1 76 0.00251244 267 0 8.08665e+07 0.0356818 3.75356e+06 8.5292e+07 9.23424e+06 23635 4.01127e+07 0 0.118745 0.948114 0.801186 8.08665e+07 0.00383045 1.76881e+07 1.15716e+07 1.78877e+07 272 1.7973e+07 1.07106e+07 0.00316843 1.79232e+07 49.9307 0.0440084 0.95245 0 50.2806 GTEX-P44G-0011-R4A-SM-2D45O C1, A1 6.6 Brain Brain - Amygdala 0001876 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R4A-SM-2I3FB C1, A1 6.6 Brain Brain - Amygdala 0001876 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.87958 205539 0.969191 0.883598 0.853387 22536 1 76 0.00242943 267 0 7.79725e+07 0.0304459 6.86231e+06 8.82443e+07 9.15828e+06 22550 3.86838e+07 0 0.115804 0.883598 0.754051 7.79725e+07 0.00391381 1.68907e+07 1.84811e+07 1.76063e+07 285 1.75591e+07 7.40337e+06 0.00316824 1.72049e+07 49.4906 0.0777649 0.887616 0 51.0371 GTEX-P44G-0011-R5A-SM-2D45M C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R5A-SM-2I3FA C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.922768 333055 0.960149 0.926167 0.822078 23995 1 76 0.00249277 268 0 8.89679e+07 0.0395365 6.2096e+06 9.60604e+07 1.02578e+07 24013 4.41853e+07 0 0.138071 0.926167 0.761381 8.89679e+07 0.00385199 1.89625e+07 2.46183e+07 1.98782e+07 286 1.9805e+07 8.99061e+06 0.00316988 1.92835e+07 49.333 0.0646427 0.929565 0 51.1789 GTEX-P44G-0011-R6A-SM-2XCD3 C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.876241 165092 0.963261 0.882459 0.814399 24699 1 76 0.00279439 134 0 7.15087e+07 0.036404 3.38608e+06 8.10335e+07 1.39121e+07 24724 3.54133e+07 0 0.148862 0.882459 0.718673 7.15087e+07 0.0125303 1.56694e+07 8.68721e+06 1.57186e+07 172 1.58662e+07 8.23271e+06 0.00762805 1.59755e+07 50.1716 0.0417862 0.888677 0 50.0784 GTEX-P44G-0011-R6A-SM-2XV5M C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R7A-SM-2D45K C1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0011-R7A-SM-2I3F9 C1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 574 BP-19130 RNA isolation_PAXgene Tissue miRNA 09/29/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.912289 1.25768e+06 0.93515 0.916177 0.796334 23309 1 76 0.00252924 268 0 9.87551e+07 0.0645466 8.94294e+06 1.0779e+08 1.10571e+07 23323 4.90182e+07 0 0.138816 0.916177 0.729582 9.87551e+07 0.00384908 2.02665e+07 6.39932e+07 2.15555e+07 288 2.15052e+07 8.27156e+06 0.00318636 2.06277e+07 48.9586 0.0829659 0.920064 0 51.5411 GTEX-P44G-0226-SM-2D44P 1 C1 . Epidermis is 2-3% of specimen thickness. Areas of poor fixation, subcutaneous fat 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 667 248 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0226-SM-2I3F3 1 C1 . Epidermis is 2-3% of specimen thickness. Areas of poor fixation, subcutaneous fat 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 667 248 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.537596 121314 0.970716 0.545005 0.802592 24840 1 76 0.00378569 149 0 8.42248e+07 0.028996 1.06618e+06 1.5454e+08 3.99306e+07 24869 4.13055e+07 0 0.168124 0.545005 0.437417 8.42248e+07 0.0261746 1.81684e+07 1.17575e+07 1.85693e+07 155 1.90216e+07 1.23965e+07 0.0148279 1.8755e+07 49.6472 0.00689907 0.552414 0 50.5456 GTEX-P44G-0526-SM-2D44L 1 C1 8.6x6.8mm ~50% intermingled adipose tissue 7.6 Muscle Muscle - Skeletal 0011907 698 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0526-SM-2XCD1 1 C1 8.6x6.8mm ~50% intermingled adipose tissue 7.6 Muscle Muscle - Skeletal 0011907 698 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.839757 86774 0.978236 0.846676 0.848232 19912 1 76 0.00249822 114 0 5.38215e+07 0.0215331 505333 6.35679e+07 7.19821e+06 19921 2.66345e+07 0 0.130003 0.846676 0.718178 5.38215e+07 0.0124175 1.1643e+07 5.93543e+06 1.18872e+07 121 1.2035e+07 9.90616e+06 0.00741732 1.1902e+07 49.7221 0.0079495 0.853596 0 50.519 GTEX-P44G-0526-SM-DMRPR 1 C1 8.6x6.8mm ~50% intermingled adipose tissue Muscle Muscle - Skeletal 0011907 698 240 BP-23761 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-P44G-0526-SM-DMZ38 1 C1 8.6x6.8mm ~50% intermingled adipose tissue Muscle Muscle - Skeletal 0011907 698 240 BP-23761 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-P44G-0626-SM-2D44I 3 C1 9x6.5mm. Less-well preserved than usual 5.8 Thyroid Thyroid 0002046 709 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0626-SM-2I5EO 3 C1 9x6.5mm. Less-well preserved than usual 5.8 Thyroid Thyroid 0002046 709 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.76482 245193 0.963834 0.768997 0.778849 22706 1 76 0.00295872 125 0 6.80909e+07 0.0359251 664350 8.85451e+07 1.78425e+07 22731 3.37125e+07 0 0.184985 0.768997 0.598933 6.80909e+07 0.0105813 1.47639e+07 1.37728e+07 1.49964e+07 140 1.5083e+07 8.93457e+06 0.00674931 1.49995e+07 49.8611 0.00750296 0.773175 0 50.3906 GTEX-P44G-0826-SM-2D44D 1 C1 9x3mm. Mild ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 713 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-0826-SM-2I5ES 1 C1 9x3mm. Mild ischemic changes 5.9 Heart Heart - Left Ventricle 0006566 713 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 RNASEQ 0.671742 252058 0.977818 0.677076 0.849106 19825 1 76 0.00356379 262 0 8.84924e+07 0.0220289 9.0641e+06 1.30698e+08 3.49237e+07 19832 4.37186e+07 0 0.128712 0.677076 0.574909 8.84924e+07 0.014058 1.91695e+07 3.16986e+07 2.00149e+07 286 2.00465e+07 4.49254e+06 0.00876954 1.95113e+07 49.3235 0.0693515 0.682409 0 51.0787 GTEX-P44G-0926-SM-325AM 3 C1 7.6x6mm. Extremely hemorrhagic/edema? Pending glass review. Poorly fixed throughout Lung Lung 0008952 716 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 6992696016_R04C01 GTEX-P44G-0926-SM-325I2 3 C1 7.6x6mm. Extremely hemorrhagic/edema? Pending glass review. Poorly fixed throughout Lung Lung 0008952 716 240 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R04C01 GTEX-P44G-1126-SM-3NM9D 1 C1 11 x 6.8mm. Focal area poor fixation, hole/tears 6 Liver Liver 0001114 722 240 BP-18460 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988515 269140 0.973448 0.991019 0.857493 20369 1 76 0.00383229 369 0 9.95088e+07 0.0260648 3.62623e+06 1.00411e+08 1.98251e+07 20384 4.94938e+07 0 0.115955 0.991019 0.849792 9.95088e+07 0.00496044 2.19919e+07 1.95786e+07 2.23762e+07 340 2.22891e+07 9.2172e+06 0.00439494 2.23014e+07 50.0137 0.0361141 0.993524 0 50.4331 GTEX-P44G-2326-SM-2XCCZ 1 C1 6.7x5.4. Well-fixed. 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 753 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.873755 79089 0.979691 0.879206 0.817449 20071 1 76 0.0027787 122 0 5.00749e+07 0.0200563 752214 5.69547e+07 6.05217e+06 20087 2.47882e+07 0 0.162242 0.879206 0.718706 5.00749e+07 0.012412 1.11555e+07 5.32318e+06 1.1147e+07 148 1.12116e+07 6.22319e+06 0.0075655 1.13747e+07 50.3609 0.0132072 0.884657 0 49.9811 GTEX-P44G-2326-SM-2XV5B 1 C1 6.7x5.4. Well-fixed. 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 753 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44G-2426-SM-2D44E 2 C1 5 x 3.4mm 7.5 Brain Brain - Cortex 0001870 782 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-2426-SM-2I5ER 2 C1 5 x 3.4mm 7.5 Brain Brain - Cortex 0001870 782 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.873928 199732 0.969985 0.879128 0.865418 23405 1 76 0.00296395 195 0 8.643e+07 0.0294958 4.64802e+06 9.83133e+07 1.78357e+07 23423 4.28121e+07 0 0.104568 0.879128 0.760813 8.643e+07 0.0101699 1.88619e+07 1.2887e+07 1.93901e+07 254 1.94994e+07 1.07498e+07 0.0065456 1.91656e+07 49.5683 0.0472776 0.884329 0 50.6905 GTEX-P44G-2526-SM-2D44S 2 C1 4.5x6.8 Areas of poor fixation 7 Brain Brain - Cerebellum 0002037 784 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P44G-2526-SM-2I5EK 2 C1 4.5x6.8 Areas of poor fixation 7 Brain Brain - Cerebellum 0002037 784 240 BP-18461 RNA isolation_PAXgene Tissue miRNA 08/24/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.757314 214726 0.942295 0.761654 0.709906 23083 1 76 0.0032056 91 0 5.76718e+07 0.0573342 1.90849e+06 7.57192e+07 1.67463e+07 23109 2.85103e+07 0 0.232389 0.761654 0.540703 5.76718e+07 0.0105997 1.22716e+07 1.16607e+07 1.25371e+07 115 1.26371e+07 5.2743e+06 0.00688156 1.24524e+07 49.6318 0.0252049 0.765995 0 50.5352 GTEX-P44H-0006-SM-2XCFB C1 8 Blood Whole Blood 0013756 BP-18547 RNA isolation_PAXgene Blood RNA (Manual) 08/29/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.500032 258391 0.968341 0.504172 0.743196 20205 1 76 0.00274099 119 0 5.25563e+07 0.0312192 288110 1.04243e+08 1.3924e+07 20219 2.58621e+07 0 0.225145 0.504172 0.374698 5.25563e+07 0.0112016 1.15379e+07 2.09948e+07 1.16649e+07 128 1.18424e+07 8.89235e+06 0.00693656 1.17738e+07 49.8548 0.00276384 0.508311 0 50.2737 GTEX-P44H-0006-SM-2XV4L C1 8 Blood Whole Blood 0013756 BP-18547 RNA isolation_PAXgene Blood RNA (Manual) 08/29/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0008-SM-48TDW C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99288 401286 0.977679 0.994691 0.871522 20234 1 76 0.00148963 157 0 6.90315e+07 0.0219055 131936 6.93999e+07 3.73661e+06 20247 3.43835e+07 0 0.106157 0.994691 0.866895 6.90315e+07 0.0020197 1.53478e+07 8.19517e+06 1.54879e+07 161 1.55427e+07 1.65812e+07 0.00175418 1.54152e+07 49.7941 0.0019011 0.996501 0 50.2273 GTEX-P44H-0011-R10A-SM-2XCEK C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.747762 90564 0.964209 0.752631 0.853579 22684 1 76 0.00250396 122 0 5.24931e+07 0.0353851 2.12286e+06 6.97461e+07 9.12168e+06 22698 2.59523e+07 0 0.110629 0.752631 0.642431 5.24931e+07 0.0100509 1.14772e+07 5.8945e+06 1.15451e+07 151 1.16236e+07 5.75006e+06 0.00625301 1.17042e+07 50.1728 0.030437 0.7575 0 50.1476 GTEX-P44H-0011-R10A-SM-2XV6E C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R10A-SM-CYKW8 C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 RIP-Seq GTEX-P44H-0011-R10a-SM-AHZM7 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 280 ChIP-Seq GTEX-P44H-0011-R11A-SM-2XCER C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.836515 247734 0.943388 0.839258 0.743158 25758 1 76 0.00247077 375 0 1.43972e+08 0.0561912 1.43841e+06 1.71546e+08 1.99724e+07 25812 7.1399e+07 0 0.20023 0.839258 0.623702 1.43972e+08 0.00938235 3.08179e+07 1.48189e+07 3.08736e+07 430 3.10201e+07 1.77624e+07 0.00591527 3.10887e+07 50.0552 0.00838496 0.842001 0 50.0452 GTEX-P44H-0011-R11A-SM-2XV6S C1, A1 6.9 Brain Brain - Cerebellar Hemisphere 0002037 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R1A-SM-2XV5Z C1, A1 6.5 Brain Brain - Hippocampus 0001954 280 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R1A-SM-3NM8J C1, A1 6.5 Brain Brain - Hippocampus 0001954 280 BP-19250 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989501 919461 0.951141 0.992151 0.817696 25324 1 76 0.00382569 374 0 1.02718e+08 0.0484957 2.70184e+06 1.0353e+08 2.12203e+07 25364 5.10525e+07 0 0.133445 0.992151 0.811278 1.02718e+08 0.00513787 2.23088e+07 2.75595e+07 2.24499e+07 352 2.24189e+07 1.24029e+07 0.00448003 2.26073e+07 50.2092 0.0260971 0.994801 0 50.1576 GTEX-P44H-0011-R3A-SM-2XCEQ C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 EXCLUDE 0.196736 24105 0.963394 0.202738 0.832249 19817 1 76 0.00287945 110 0 1.58896e+07 0.0360602 604775 7.83751e+07 1.42476e+07 19823 7.55224e+06 0 0.131145 0.202738 0.168729 1.58896e+07 0.0152927 3.35713e+06 2.166e+06 3.44271e+06 124 3.63822e+06 1.80154e+06 0.0089023 3.5937e+06 49.6922 0.00771641 0.208741 0 50.6293 GTEX-P44H-0011-R3A-SM-2XV6J C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R3A-SM-5SI8A C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989544 707206 0.95417 0.992853 0.831948 23971 1 76 0.00193256 269 0 8.11472e+07 0.0454731 3.22175e+06 8.17313e+07 7.75916e+06 23988 4.03387e+07 0 0.122222 0.992853 0.826002 8.11472e+07 0.00325512 1.75813e+07 2.06812e+07 1.77125e+07 307 1.76644e+07 9.42331e+06 0.00259164 1.78844e+07 50.3095 0.0394188 0.996161 0 50.1857 GTEX-P44H-0011-R3A-SM-D3L8E C1, A1 6.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991697 799277 0.957971 0.993912 0.839228 25120 1 76 0.00239175 373 0 1.09365e+08 0.0416499 4.57247e+06 1.10035e+08 1.00914e+07 25149 5.44339e+07 0 0.118743 0.993912 0.834119 1.09365e+08 0.00392174 2.37692e+07 2.04806e+07 2.41171e+07 362 2.40904e+07 1.32271e+07 0.00315504 2.40114e+07 49.9179 0.0415546 0.996127 0 50.3633 GTEX-P44H-0011-R4A-SM-2XCEW C1, A1 6.5 Brain Brain - Amygdala 0001876 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.746368 96779 0.971612 0.754369 0.865859 23226 1 76 0.00243244 163 0 6.75481e+07 0.0280529 3.74388e+06 8.95425e+07 1.32254e+07 23242 3.32452e+07 0 0.105753 0.754369 0.653177 6.75481e+07 0.011089 1.48044e+07 7.59981e+06 1.50171e+07 194 1.52389e+07 6.98079e+06 0.0067148 1.52067e+07 49.947 0.0418112 0.762369 0 50.3566 GTEX-P44H-0011-R4A-SM-2XV64 C1, A1 6.5 Brain Brain - Amygdala 0001876 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R5A-SM-2XCEX C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.783677 181910 0.960391 0.787005 0.829505 25444 1 76 0.00234175 255 0 9.87105e+07 0.0392246 2.97588e+06 1.25425e+08 1.54177e+07 25471 4.89108e+07 0 0.130886 0.787005 0.652825 9.87105e+07 0.00949819 2.14802e+07 1.10638e+07 2.16114e+07 268 2.17378e+07 1.17549e+07 0.00590484 2.17114e+07 49.9696 0.0237263 0.790334 0 50.1522 GTEX-P44H-0011-R5A-SM-2XV6B C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R6A-SM-2XCF3 C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.706634 117816 0.953536 0.710112 0.786699 25914 1 76 0.00241456 174 0 8.48107e+07 0.0461377 3.323e+06 1.19433e+08 1.63458e+07 25959 4.19762e+07 0 0.166837 0.710112 0.558645 8.48107e+07 0.00975577 1.83454e+07 7.72406e+06 1.86089e+07 214 1.8669e+07 9.54877e+06 0.00606719 1.8657e+07 49.9839 0.0278232 0.71359 0 50.3566 GTEX-P44H-0011-R6A-SM-2XV5S C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0011-R8A-SM-2XCEL C1, A1 6.9 Brain Brain - Hypothalamus 0001898 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.849288 227504 0.959542 0.852039 0.837249 25287 1 76 0.00252603 375 0 1.08393e+08 0.0401153 4.20098e+06 1.27216e+08 1.46928e+07 25315 5.37557e+07 0 0.122292 0.852039 0.713369 1.08393e+08 0.00913589 2.37672e+07 1.36142e+07 2.38906e+07 388 2.39281e+07 1.22521e+07 0.00582029 2.40327e+07 50.1091 0.0330225 0.85479 0 50.1294 GTEX-P44H-0011-R8A-SM-2XV5U C1, A1 6.9 Brain Brain - Hypothalamus 0001898 280 BP-19253 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0226-SM-2XCEU 1 C1 3 ~9x2mm pieces. Epithelium is ~1% or less of specimen thickness. Areas of poor fixation with tears/holes in dermis 7 Skin Skin - Sun Exposed (Lower leg) 0004264 458 461 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.982108 216640 0.970288 0.985298 0.781862 25034 1 76 0.0023351 266 0 1.22154e+08 0.0294434 731291 1.23977e+08 1.20937e+07 25082 6.06692e+07 0 0.188425 0.985298 0.770368 1.22154e+08 0.00936644 2.66676e+07 1.19359e+07 2.69699e+07 289 2.69589e+07 1.83265e+07 0.00583939 2.70496e+07 50.084 0.0058986 0.988488 0 50.2817 GTEX-P44H-0226-SM-2XV67 1 C1 3 ~9x2mm pieces. Epithelium is ~1% or less of specimen thickness. Areas of poor fixation with tears/holes in dermis 7 Skin Skin - Sun Exposed (Lower leg) 0004264 458 461 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0326-SM-2XCES 0 C1 Well-fixed. 8.5x7mm 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 461 459 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.781907 151702 0.968687 0.78433 0.749774 23787 1 76 0.00253345 170 0 9.05453e+07 0.0310146 603580 1.15443e+08 1.52025e+07 23826 4.48513e+07 0 0.218913 0.78433 0.588071 9.05453e+07 0.00949351 1.99374e+07 9.97502e+06 1.98603e+07 196 2.00844e+07 1.25562e+07 0.00600273 1.99771e+07 49.8661 0.00522839 0.786753 0 49.9031 GTEX-P44H-0326-SM-2XV4H 0 C1 Well-fixed. 8.5x7mm 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 461 459 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0426-SM-2XCEZ 1 C1 9x7mm. Central 7.7x1.4mm wedge of adipose tissue-focal areas of poor fixation 7.9 Muscle Muscle - Skeletal 0011907 487 434 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.846837 135162 0.977052 0.851723 0.837605 21902 1 76 0.0021517 216 0 1.091e+08 0.0227181 725121 1.28093e+08 1.72426e+07 21933 5.40565e+07 0 0.139446 0.851723 0.713407 1.091e+08 0.00944618 2.34444e+07 1.08786e+07 2.35359e+07 251 2.3698e+07 1.95133e+07 0.00577802 2.38362e+07 50.1454 0.00566089 0.856609 0 50.0974 GTEX-P44H-0426-SM-2XV5L 1 C1 9x7mm. Central 7.7x1.4mm wedge of adipose tissue-focal areas of poor fixation 7.9 Muscle Muscle - Skeletal 0011907 487 434 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0526-SM-2XCF1 2 C1 4.3x4.1mm. Specimen is 40% associated adipose tissue 6.8 Nerve Nerve - Tibial 0001323 490 432 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.967329 227579 0.962376 0.970627 0.722375 26328 1 76 0.00250394 290 0 1.43013e+08 0.0373302 322987 1.47341e+08 1.71113e+07 26403 7.09543e+07 0 0.240001 0.970627 0.701157 1.43013e+08 0.00963142 3.11722e+07 1.25908e+07 3.13404e+07 320 3.14247e+07 1.98641e+07 0.00605557 3.15434e+07 50.0943 0.0021921 0.973926 0 50.1345 GTEX-P44H-0526-SM-2XV4U 2 C1 4.3x4.1mm. Specimen is 40% associated adipose tissue 6.8 Nerve Nerve - Tibial 0001323 490 432 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0626-SM-2XCF2 2 C1 2.6x2.5mm. Clean specimen 7.2 Blood Vessel Artery - Tibial 0007610 491 432 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.310828 22695 0.971481 0.321452 0.825742 18983 1 76 0.0027768 131 0 2.04303e+07 0.0280552 129084 6.35563e+07 1.09126e+07 18988 9.76947e+06 0 0.145739 0.321452 0.265437 2.04303e+07 0.0141441 4.22697e+06 2.2244e+06 4.2884e+06 133 4.59042e+06 3.7126e+06 0.00827259 4.56109e+06 49.8398 0.00203102 0.332076 0 50.3607 GTEX-P44H-0626-SM-2XV4S 2 C1 2.6x2.5mm. Clean specimen 7.2 Blood Vessel Artery - Tibial 0007610 491 432 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-0726-SM-48TBT 2 C1 9.3x8.2. Centrally poorly fixed/ autolytic: doubt infarct as no inflammation noted, pending glass review 5.9 Heart Heart - Left Ventricle 0006566 504 421 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991452 191919 0.975776 0.993318 0.806627 21605 1 76 0.00169391 150 0 6.97842e+07 0.0240747 1.53276e+06 7.02536e+07 3.85777e+06 21630 3.47534e+07 0 0.169149 0.993318 0.801237 6.97842e+07 0.00243479 1.54643e+07 8.31201e+06 1.55431e+07 198 1.55655e+07 8.78638e+06 0.00206365 1.55584e+07 49.9886 0.0218175 0.995184 0 50.1271 GTEX-P44H-1026-SM-3NM96 2 C1 3 ~8x1 mm pieces 7.6 Blood Vessel Artery - Aorta 0001496 514 420 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989999 373972 0.971194 0.99233 0.77502 24537 1 76 0.00403599 281 0 1.12828e+08 0.0284827 184330 1.137e+08 2.13703e+07 24578 5.60925e+07 0 0.196174 0.99233 0.769075 1.12828e+08 0.00515567 2.44146e+07 1.18928e+07 2.44671e+07 273 2.45124e+07 2.06223e+07 0.00459452 2.4625e+07 50.1146 0.00162119 0.99466 0 50.0536 GTEX-P44H-1126-SM-2VCU3 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages Lung Lung 0008952 516 420 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_5M_batch6_Apr12 05/03/2012 Illumina OMNI SNP Array OMNI 7319532002_R02C01 GTEX-P44H-1126-SM-2XK3A 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages Lung Lung 0008952 516 420 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R06C02 GTEX-P44H-1126-SM-48TBU 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages 5.9 Lung Lung 0008952 516 420 BP-18616 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.988964 205612 0.965226 0.990804 0.699321 23266 1 76 0.00207146 111 0 5.48471e+07 0.0345501 337951 5.53561e+07 2.78465e+06 23300 2.72859e+07 0 0.265905 0.990804 0.69289 5.48471e+07 0.00273313 1.20584e+07 6.37666e+06 1.21058e+07 124 1.21278e+07 6.98517e+06 0.00240168 1.21331e+07 50.011 0.00610503 0.992645 0 50.0981 GTEX-P44H-1126-SM-4SVQD 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages Lung Lung 0008952 516 420 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-P44H-1126-SM-5JK39 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages Lung Lung 0008952 516 420 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-P44H-1126-SM-CLTFW 2 C1 9x8mm. Patchy chronic vascular congestion with foci of hemosiderin-laden macrophages Lung Lung 0008952 516 420 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-P44H-1426-SM-E9U4O 2 C1 3 ~ 6.5x2.5mm pieces. Poorly fixed 5.6 Esophagus Esophagus - Muscularis 0004648 557 397 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.983292 285284 0.968967 0.984378 0.764784 21589 1 76 0.0018898 122 0 5.53175e+07 0.0308744 565841 5.61954e+07 2.49988e+06 21608 2.75437e+07 0 0.204183 0.984378 0.752836 5.53175e+07 0.00295927 1.20067e+07 4.83004e+06 1.21136e+07 137 1.2079e+07 7.60076e+06 0.00242395 1.20996e+07 50.0425 0.0100692 0.985464 0 50.2216 GTEX-P44H-2226-SM-E9U4P 2 C1 3 ~8x3mm pieces. Mucosa completely sloughed. Poorly fixed muscle, many holes/tears 5.7 Bladder Bladder 0001255 577 382 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.984555 317017 0.969036 0.985577 0.76557 22611 1 76 0.00194802 143 0 6.91595e+07 0.0307452 422370 7.01715e+07 2.69339e+06 22640 3.44432e+07 0 0.203466 0.985577 0.754528 6.91595e+07 0.00284597 1.50549e+07 6.74497e+06 1.51555e+07 163 1.50956e+07 1.07371e+07 0.00239653 1.51854e+07 50.1482 0.00601911 0.9866 0 50.1665 GTEX-P44H-2426-SM-2XCEJ 2 C1 5.4x3.7. Not cortex but cerebellum 7.1 Brain Brain - Cerebellum 0002037 597 363 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.909767 314096 0.935945 0.91339 0.676159 25140 1 76 0.00259871 163 0 9.07669e+07 0.0637171 795239 9.93737e+07 1.14479e+07 25184 4.49852e+07 0 0.259786 0.91339 0.617597 9.07669e+07 0.00983813 1.93211e+07 1.36714e+07 1.94295e+07 196 1.95281e+07 1.02649e+07 0.00620406 1.95423e+07 50.0182 0.00800251 0.917012 0 50.1398 GTEX-P44H-2426-SM-2XV73 2 C1 5.4x3.7. Not cortex but cerebellum 7.1 Brain Brain - Cerebellum 0002037 597 363 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P44H-2626-SM-2XCET 2 C1 6x3.7mm 6.3 Pituitary Pituitary 0000007 599 362 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.746866 266422 0.962238 0.751853 0.842862 24065 1 76 0.00242172 180 0 8.1612e+07 0.0373323 2.71215e+06 1.08548e+08 1.45909e+07 24092 4.03479e+07 0 0.119377 0.751853 0.633708 8.1612e+07 0.0103066 1.78009e+07 1.41576e+07 1.80218e+07 222 1.81755e+07 9.62364e+06 0.00633803 1.81311e+07 49.9389 0.0249857 0.75684 0 50.3083 GTEX-P44H-2626-SM-2XV61 2 C1 6x3.7mm 6.3 Pituitary Pituitary 0000007 599 362 BP-18617 RNA isolation_PAXgene Tissue miRNA 09/01/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-P4PP-0004-SM-2H2WW B1 Blood Whole Blood 0013756 -68 BP-18590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828041_R02C01 GTEX-P4PP-0004-SM-2XJZY B1 Blood Whole Blood 0013756 -68 BP-18590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R05C01 GTEX-P4PP-0004-SM-3UZF8 B1 Blood Whole Blood 0013756 -68 BP-18590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-P4PP-0004-SM-5JK2S B1 Blood Whole Blood 0013756 -68 BP-18590 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 LCSET-5036 03/04/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-P4PP-0005-SM-2D45V B1 9.2 Blood Whole Blood 0013756 -68 BP-18598 RNA isolation_PAXgene Blood RNA (Manual) 08/31/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PP-0005-SM-2HMKX B1 9.2 Blood Whole Blood 0013756 -68 BP-18598 RNA isolation_PAXgene Blood RNA (Manual) 08/31/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.839795 927418 0.943115 0.845682 0.782091 17787 1 76 0.00300355 105 0 8.01067e+07 0.0549115 264660 9.47244e+07 1.65304e+07 17794 3.95741e+07 0 0.161023 0.845682 0.661401 8.01067e+07 0.00967492 1.73829e+07 1.15257e+08 1.80919e+07 126 1.82774e+07 1.87677e+07 0.00631602 1.77295e+07 49.2391 0.002794 0.85157 0 50.9993 GTEX-P4PP-0008-SM-48TDV B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 198 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992818 413737 0.980892 0.994714 0.858077 20312 1 76 0.00143031 157 0 7.23696e+07 0.0187913 154402 7.27541e+07 3.70838e+06 20330 3.60424e+07 0 0.122815 0.994714 0.853542 7.23696e+07 0.002017 1.61949e+07 7.51008e+06 1.63487e+07 158 1.64337e+07 1.86136e+07 0.00172309 1.62442e+07 49.7101 0.00212224 0.996611 0 50.2363 GTEX-P4PP-0126-SM-2D442 1 B1 3 ~8x1.5mm pieces. Squamous epithelium is 1-2% of thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 196 854 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PP-0126-SM-3LK69 1 B1 3 ~8x1.5mm pieces. Squamous epithelium is 1-2% of thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 196 854 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.925209 183595 0.972745 0.925634 0.848906 22857 1 76 0.00238672 215 0 8.1185e+07 0.0270475 334862 8.77075e+07 8.6771e+06 22874 4.03498e+07 0 0.123839 0.925634 0.785777 8.1185e+07 0.00357864 1.77817e+07 9.78667e+06 1.79754e+07 216 1.79336e+07 1.50161e+07 0.00298241 1.78631e+07 49.9015 0.00381794 0.92606 0 50.2709 GTEX-P4PP-0226-SM-2M479 1 B1 ~10x10mm. Central 60% unfixed with large hole/tear 8 Adipose Tissue Adipose - Subcutaneous 0002190 193 857 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PP-0226-SM-2S1NN 1 B1 ~10x10mm. Central 60% unfixed with large hole/tear 8 Adipose Tissue Adipose - Subcutaneous 0002190 193 857 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.0927564 6983 0.974201 0.0930004 0.816566 14694 1 76 0.00469136 100 0 4.95184e+06 0.0254512 23068 5.32454e+07 1.8989e+07 14694 2.40852e+06 0 0.157634 0.0930004 0.075941 4.95184e+06 0.0115746 1.08345e+06 700598 1.1049e+06 99 1.11111e+06 917639 0.00812393 1.0902e+06 49.525 0.00043324 0.0932443 0 50.4902 GTEX-P4PP-0226-SM-5S2VR 1 B1 ~10x10mm. Central 60% unfixed with large hole/tear 8 Adipose Tissue Adipose - Subcutaneous 0002190 193 857 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.990924 269491 0.977129 0.993511 0.822036 22397 1 76 0.0019941 172 0 7.89159e+07 0.0225615 435944 7.94313e+07 7.9717e+06 22416 3.92724e+07 0 0.155093 0.993511 0.816702 7.89159e+07 0.00301765 1.74623e+07 8.80288e+06 1.75094e+07 195 1.75195e+07 1.47197e+07 0.00250454 1.76481e+07 50.1828 0.00548831 0.996099 0 50.0673 GTEX-P4PP-0226-SM-D4P1Z 1 B1 ~10x10mm. Central 60% unfixed with large hole/tear 8 Adipose Tissue Adipose - Subcutaneous 0002190 193 857 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993713 541673 0.977607 0.995014 0.820673 23970 1 76 0.00242877 380 0 1.22909e+08 0.0220861 682067 1.23525e+08 1.47179e+07 24005 6.12573e+07 0 0.156934 0.995014 0.816581 1.22909e+08 0.00340582 2.70741e+07 1.37488e+07 2.7365e+07 343 2.73993e+07 2.32548e+07 0.00291665 2.71903e+07 49.8086 0.0055217 0.996315 0 50.2672 GTEX-P4PP-0326-SM-2D43Z 1 B1 8x4.5mm. Contraction bands and nuclear hypertrophy c/w ischemic damage 8.6 Heart Heart - Left Ventricle 0006566 78 972 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PP-0326-SM-2HML9 1 B1 8x4.5mm. Contraction bands and nuclear hypertrophy c/w ischemic damage 8.6 Heart Heart - Left Ventricle 0006566 78 972 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1156_1 04/02/2012 TruSeq.v1 EXCLUDE 0.216456 62044 0.982933 0.239258 0.85643 19645 1 76 0.004179 84 0 6.14098e+07 0.0163008 1.27659e+06 2.56668e+08 9.7487e+07 19648 2.75617e+07 0 0.126502 0.239258 0.204907 6.14098e+07 0.102153 1.22687e+07 1.38601e+07 1.23313e+07 101 1.47312e+07 9.14203e+06 0.0484976 1.47769e+07 50.0774 0.00497371 0.262059 0 50.1273 GTEX-P4PP-0326-SM-33HC4 1 B1 8x4.5mm. Contraction bands and nuclear hypertrophy c/w ischemic damage 8.6 Heart Heart - Left Ventricle 0006566 78 972 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.832782 353638 0.985618 0.833441 0.858853 21756 1 76 0.00250384 517 0 1.67608e+08 0.0141679 3.59387e+06 2.01103e+08 1.91911e+07 21781 8.31453e+07 0 0.126765 0.833441 0.715803 1.67608e+08 0.00636274 3.69742e+07 3.97914e+07 3.66776e+07 469 3.61631e+07 2.00581e+07 0.00443176 3.74919e+07 50.9021 0.0178708 0.834099 0 49.7987 GTEX-P4PP-0326-SM-5S2TQ 1 B1 8x4.5mm. Contraction bands and nuclear hypertrophy c/w ischemic damage 8.6 Heart Heart - Left Ventricle 0006566 78 972 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.988988 227865 0.985759 0.990993 0.845316 20141 1 76 0.00228532 268 0 1.00686e+08 0.0140344 1.96239e+06 1.01601e+08 1.04652e+07 20150 5.01641e+07 0 0.140444 0.990993 0.837702 1.00686e+08 0.00326299 2.21389e+07 4.13096e+07 2.17702e+07 316 2.17183e+07 1.43652e+07 0.00277316 2.237e+07 50.739 0.0193147 0.992998 0 49.5802 GTEX-P4PP-0426-SM-3NM9H 1 B1 3 ~11x1.5mm pieces 7.4 Blood Vessel Artery - Aorta 0001496 84 966 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991065 304972 0.973275 0.993235 0.819904 22753 1 76 0.00379039 278 0 1.05857e+08 0.0263228 343127 1.06578e+08 2.11925e+07 22779 5.26691e+07 0 0.153371 0.993235 0.814357 1.05857e+08 0.00492646 2.29306e+07 1.04416e+07 2.29959e+07 288 2.3026e+07 1.9179e+07 0.00435719 2.3123e+07 50.1052 0.00321948 0.995405 0 50.0711 GTEX-P4PP-0526-SM-2HMKE 1 B1 ~9x8mm. Dense areas granulomatous pneumonitis /hemorrhage. Foreign body giant cells, and lipoid-like structures. Probable Aspiration pneumonia. 8.8 Lung Lung 0008952 103 947 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.883808 124029 0.973872 0.890385 0.811982 25143 1 76 0.002698 210 0 9.73463e+07 0.0257003 383556 1.09331e+08 1.52186e+07 25167 4.81442e+07 0 0.16189 0.890385 0.722977 9.73463e+07 0.00935754 2.13511e+07 9.16163e+06 2.18404e+07 242 2.21342e+07 1.79962e+07 0.00600317 2.1727e+07 49.5359 0.00350822 0.896961 0 50.5665 GTEX-P4PP-0526-SM-2M49R 1 B1 ~9x8mm. Dense areas granulomatous pneumonitis /hemorrhage. Foreign body giant cells, and lipoid-like structures. Probable Aspiration pneumonia. 8.8 Lung Lung 0008952 103 947 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PP-0626-SM-3NM9X 1 B1 3 ~6x2mm pieces. Squamous mucosa is 20-25% of thickness 9.1 Esophagus Esophagus - Mucosa 0006920 114 936 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.98865 465588 0.973411 0.991178 0.812575 25137 1 76 0.00411651 281 0 1.10634e+08 0.0257482 457826 1.11619e+08 2.21074e+07 25171 5.49813e+07 0 0.160836 0.991178 0.805406 1.10634e+08 0.00544744 2.46395e+07 1.69958e+07 2.47276e+07 269 2.48147e+07 2.08623e+07 0.00478028 2.48281e+07 50.0135 0.00410169 0.993706 0 50.0893 GTEX-P4PP-0726-SM-3NM9S 0 B1 3 ~8.5x3.5mm pieces; small floater of ?bronchial mucosa 8.3 Esophagus Esophagus - Muscularis 0004648 112 938 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991092 383324 0.975905 0.993519 0.849871 22779 1 76 0.00380081 280 0 1.04644e+08 0.0237996 528817 1.05326e+08 1.98113e+07 22798 5.20656e+07 0 0.126034 0.993519 0.844363 1.04644e+08 0.00517943 2.25351e+07 1.14743e+07 2.26425e+07 294 2.26344e+07 1.94351e+07 0.00448843 2.27856e+07 50.1664 0.00502075 0.995946 0 50.1189 GTEX-P4PP-0926-SM-48TBZ 2 B1 9x7mm, areas of under-fixation 8 Spleen Spleen 0002106 66 984 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.988611 248170 0.965927 0.990122 0.78499 23491 1 76 0.00313799 154 0 7.50058e+07 0.0296417 340276 7.57541e+07 3.69291e+06 23519 3.7179e+07 0 0.180937 0.990122 0.777236 7.50058e+07 0.00382029 1.67064e+07 1.46582e+07 1.67477e+07 168 1.68103e+07 1.17676e+07 0.00347862 1.6754e+07 49.9162 0.00449185 0.991633 0 50.0617 GTEX-P4PP-1026-SM-3NM9O 1 B1 ~9x9mm, well fixed, about 20% intermingled fat 7.2 Pancreas Pancreas 0001150 73 977 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989213 275065 0.979617 0.991918 0.850625 21689 1 76 0.00424542 111 0 9.82902e+07 0.0200194 350257 9.9091e+07 2.05141e+07 21708 4.88786e+07 0 0.128993 0.991918 0.84375 9.82902e+07 0.00565447 2.26247e+07 3.87839e+07 2.29486e+07 137 2.29163e+07 2.90677e+07 0.00494803 2.29268e+07 50.0114 0.0035347 0.994622 0 50.3554 GTEX-P4PP-1426-SM-3NM9L 1 B1 3 ~9x2-2.5mm pieces. Mucosa well preserved, 10-15% of thickness 8.2 Colon Colon - Transverse 0001157 137 913 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989772 389104 0.972453 0.991951 0.818582 25193 1 76 0.00406374 287 0 1.12695e+08 0.0267758 1.15985e+06 1.13609e+08 2.16915e+07 25229 5.60415e+07 0 0.153871 0.991951 0.811993 1.12695e+08 0.00517512 2.48951e+07 1.54399e+07 2.49353e+07 326 2.49884e+07 1.82664e+07 0.00461821 2.50756e+07 50.087 0.0102091 0.994129 0 50.0403 GTEX-P4PP-1526-SM-3P61M 1 B1 3 ~8x3mm pieces. Foveolar cells focally simulate intestinal metaplasia because of their mucous vacuoles, but they are too regular and apical, rarely barrel-shaped; without dysplasia. Mucosa is ~20-25% of specimen thickness. No sign of an inflammatory infiltrate or atrophy of the glandular cells. 7.7 Stomach Stomach 0000945 126 924 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.94674 231881 0.979397 0.967981 0.837114 23641 1 76 0.00312468 450 0 1.16105e+08 0.0201556 599349 1.19946e+08 1.57858e+07 23669 5.66765e+07 0 0.142283 0.967981 0.810311 1.16105e+08 0.00442209 2.58987e+07 9.56566e+07 2.61651e+07 368 2.72662e+07 2.66054e+07 0.00375915 2.71261e+07 49.8712 0.00499683 0.989221 0 50.2559 GTEX-P4PP-1626-SM-2D43X 1 B1 2 ~8x7mm pieces, 50% fat. ? myositis/atrophic process. Withered muscle, fibrosis with fatty infiltration 8.5 Muscle Muscle - Skeletal 0011907 200 867 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PP-1626-SM-2HMJF 1 B1 2 ~8x7mm pieces, 50% fat. ? myositis/atrophic process. Withered muscle, fibrosis with fatty infiltration 8.5 Muscle Muscle - Skeletal 0011907 200 867 BP-18662 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.750714 123701 0.972171 0.757652 0.824834 22279 1 76 0.00271586 148 0 7.54493e+07 0.0275485 608528 9.95831e+07 1.56613e+07 22305 3.71821e+07 0 0.147337 0.757652 0.624937 7.54493e+07 0.00926265 1.6324e+07 9.51959e+06 1.66245e+07 158 1.69066e+07 1.32802e+07 0.00595928 1.66425e+07 49.6065 0.00611076 0.764589 0 50.456 GTEX-P4PP-1726-SM-2M47H 1 B1 2 ~1-1.5mm d. sections. ~40-50% both specimens are rinds of adipose tissue 7.6 Nerve Nerve - Tibial 0001323 203 864 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PP-1726-SM-2S1NS 1 B1 2 ~1-1.5mm d. sections. ~40-50% both specimens are rinds of adipose tissue 7.6 Nerve Nerve - Tibial 0001323 203 864 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.393514 47882 0.969213 0.396448 0.791115 19441 1 76 0.00446516 116 0 2.27014e+07 0.0304824 79626 5.72619e+07 1.90586e+07 19449 1.11739e+07 0 0.178097 0.396448 0.313636 2.27014e+07 0.00889906 4.90881e+06 3.21511e+06 5.04042e+06 110 5.10277e+06 3.81942e+06 0.0066657 5.00400e+06 49.5114 0.00139056 0.399382 0 50.6614 GTEX-P4PP-1826-SM-2M47G 1 B1 2 ~1.5mm diameter sections 8 Blood Vessel Artery - Tibial 0007610 207 860 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PP-1826-SM-2S1NT 1 B1 2 ~1.5mm diameter sections 8 Blood Vessel Artery - Tibial 0007610 207 860 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.55995 63568 0.971152 0.562548 0.824369 19387 1 76 0.00436192 108 0 3.56897e+07 0.0284766 123777 6.34431e+07 2.16091e+07 19392 1.76407e+07 0 0.146784 0.562548 0.463747 3.56897e+07 0.00908496 7.56166e+06 4.48773e+06 7.80285e+06 101 7.85851e+06 6.56855e+06 0.00671253 7.65621e+06 49.3481 0.00195099 0.565145 0 50.7849 GTEX-P4PP-2026-SM-3P61N 1 B1 ~7x6mm piece; a 3.3x1.2mm area of weakly proliferative stroma/glands on one edge 8.1 Uterus Uterus 0000995 151 916 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951236 457821 0.961145 0.972809 0.728331 25698 1 76 0.00326477 282 0 1.23816e+08 0.0385963 249084 1.27277e+08 1.69815e+07 25759 6.03999e+07 0 0.232815 0.972809 0.708527 1.23816e+08 0.00463216 2.64767e+07 1.71e+07 2.66469e+07 300 2.78121e+07 1.99069e+07 0.0039333 2.77359e+07 49.9314 0.00195702 0.994381 0 50.1601 GTEX-P4PP-2426-SM-3P61L 1 B1 15x9mm, postmenopausal 7.4 Ovary Ovary 0000992 143 924 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952348 444296 0.965327 0.973971 0.767522 25490 1 76 0.00314881 282 0 1.20242e+08 0.0343996 256155 1.23456e+08 1.5989e+07 25543 5.86664e+07 0 0.197805 0.973971 0.747544 1.20242e+08 0.00441581 2.57987e+07 1.73014e+07 2.59804e+07 311 2.71083e+07 2.13692e+07 0.00376824 2.70408e+07 49.9377 0.00207488 0.995593 0 50.1754 GTEX-P4PP-2526-SM-3P61P 0 B1 3 ~6x2.5mm pieces. Non keratinizing squamous mucosa is ~2-3% of specimen thickness 7.5 Vagina Vagina 0000996 165 902 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951535 281948 0.968578 0.973108 0.775695 25404 1 76 0.00322869 285 0 1.04348e+08 0.0311202 285918 1.07232e+08 1.44348e+07 25445 5.0915e+07 0 0.192883 0.973108 0.754835 1.04348e+08 0.00453355 2.25384e+07 1.21034e+07 2.26418e+07 273 2.36035e+07 1.78603e+07 0.00386665 2.36342e+07 50.0325 0.00266635 0.99468 0 50.1144 GTEX-P4PP-3026-SM-3P61O 1 B1 2 ~2mm d sections, one with approximately equal amount of fat on edge (~2x2mm) 7.5 Blood Vessel Artery - Coronary 0001621 91 976 BP-18663 RNA isolation_PAXgene Tissue miRNA 09/06/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952559 437947 0.971497 0.974264 0.82055 24186 1 76 0.00308528 276 0 1.05578e+08 0.0281848 598114 1.08367e+08 1.29126e+07 24219 5.14912e+07 0 0.150946 0.974264 0.799433 1.05578e+08 0.00454521 2.26302e+07 1.26789e+07 2.27409e+07 323 2.36818e+07 1.77845e+07 0.00379898 2.37663e+07 50.0891 0.00551935 0.99597 0 50.122 GTEX-P4PQ-0003-SM-2H2WY B1 Blood Whole Blood 0013756 -171 BP-18599 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828041_R03C01 GTEX-P4PQ-0003-SM-2XK1P B1 Blood Whole Blood 0013756 -171 BP-18599 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R06C02 GTEX-P4PQ-0003-SM-3UZFF B1 Blood Whole Blood 0013756 -171 BP-18599 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-P4PQ-0003-SM-5JK3Q B1 Blood Whole Blood 0013756 -171 BP-18599 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/31/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-P4PQ-0005-SM-2D45X B1 9.1 Blood Whole Blood 0013756 -171 BP-18598 RNA isolation_PAXgene Blood RNA (Manual) 08/31/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PQ-0005-SM-2HMKJ B1 9.1 Blood Whole Blood 0013756 -171 BP-18598 RNA isolation_PAXgene Blood RNA (Manual) 08/31/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.852668 1.29578e+06 0.928109 0.860111 0.747384 18852 1 76 0.0029015 121 0 8.71926e+07 0.0711654 211932 1.01374e+08 1.46145e+07 18862 4.30376e+07 0 0.180725 0.860111 0.642834 8.71926e+07 0.00971468 1.83469e+07 8.77818e+07 1.87745e+07 145 1.91211e+07 1.71279e+07 0.00627861 1.87056e+07 49.4508 0.0020906 0.867555 0 50.576 GTEX-P4PQ-0008-SM-48TDX B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 235 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993128 338986 0.980879 0.99493 0.889744 18521 1 76 0.00140678 130 0 5.25197e+07 0.0187912 223181 5.27874e+07 2.57246e+06 18526 2.61571e+07 0 0.0911354 0.99493 0.885233 5.25197e+07 0.00202247 1.16707e+07 6.58186e+06 1.17584e+07 118 1.17762e+07 1.43441e+07 0.00171407 1.17541e+07 49.9531 0.00422792 0.996731 0 50.1871 GTEX-P4PQ-0126-SM-2M47B 1 B1 6 ~8x2.5mm pieces. Squamous mucosa is ~1-2% of thickness. Areas of poor fixation with tears. 6 Skin Skin - Sun Exposed (Lower leg) 0004264 235 1220 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PQ-0126-SM-2S1NM 1 B1 6 ~8x2.5mm pieces. Squamous mucosa is ~1-2% of thickness. Areas of poor fixation with tears. 6 Skin Skin - Sun Exposed (Lower leg) 0004264 235 1220 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.374664 26864 0.97127 0.37683 0.827389 19995 1 76 0.00454339 109 0 2.34784e+07 0.0285292 195523 6.23049e+07 2.34344e+07 20002 1.1555e+07 0 0.143881 0.37683 0.311785 2.34784e+07 0.00959498 5.06107e+06 2.99305e+06 5.22323e+06 105 5.25984e+06 3.84084e+06 0.00705467 5.14684e+06 49.4571 0.00313817 0.378996 0 50.7884 GTEX-P4PQ-0226-SM-2M477 1 B1 19x5mm with 6x1mm central hole tear of under-fixation 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 237 1219 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4PQ-0226-SM-2S1NK 1 B1 19x5mm with 6x1mm central hole tear of under-fixation 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 237 1219 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.501623 50722 0.976132 0.504204 0.813159 20632 1 76 0.00443433 108 0 3.73239e+07 0.0235642 110347 7.40254e+07 2.55649e+07 20643 1.84264e+07 0 0.162973 0.504204 0.409998 3.73239e+07 0.00923912 8.10128e+06 4.24982e+06 8.3254e+06 103 8.38953e+06 6.93569e+06 0.00682443 8.21489e+06 49.4741 0.00149066 0.506785 0 50.6822 GTEX-P4PQ-0326-SM-2D43Y 1 B1 2 ~7x7mm pieces. Ischemic changes, numerous contraction bands noted 8.2 Heart Heart - Left Ventricle 0006566 164 1274 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PQ-0326-SM-2HMJ8 1 B1 2 ~7x7mm pieces. Ischemic changes, numerous contraction bands noted 8.2 Heart Heart - Left Ventricle 0006566 164 1274 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.932454 148763 0.986097 0.940238 0.879244 21138 1 76 0.00258038 268 0 1.02114e+08 0.0136188 3.26343e+06 1.08605e+08 1.43917e+07 21147 5.04819e+07 0 0.106852 0.940238 0.826699 1.02114e+08 0.00883091 2.22895e+07 1.76423e+07 2.27993e+07 288 2.29564e+07 1.69508e+07 0.00567977 2.27719e+07 49.7982 0.0300486 0.948021 0 50.5653 GTEX-P4PQ-0426-SM-3NMCI 1 B1 6 ~7x1.5mm pieces 8.1 Blood Vessel Artery - Aorta 0001496 159 1279 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990589 246128 0.972504 0.992833 0.859742 22297 1 76 0.00280162 274 0 9.78518e+07 0.0272031 268914 9.85582e+07 1.24295e+07 22320 4.86853e+07 0 0.112761 0.992833 0.85358 9.78518e+07 0.00414047 2.10968e+07 9.42354e+06 2.12242e+07 321 2.12014e+07 1.82648e+07 0.00346954 2.13294e+07 50.1505 0.00272848 0.995076 0 50.1504 GTEX-P4PQ-0526-SM-2D449 1 B1 2 ~12x7mm pieces, fairly clean, minimal inflammation, patchy atelectasis 7.4 Lung Lung 0008952 156 1281 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PQ-0526-SM-2HMKR 1 B1 2 ~12x7mm pieces, fairly clean, minimal inflammation, patchy atelectasis 7.4 Lung Lung 0008952 156 1281 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.94701 181484 0.968438 0.954065 0.794464 25984 1 76 0.00276216 276 0 1.04098e+08 0.0312394 872685 1.0911e+08 1.52329e+07 26030 5.14644e+07 0 0.173975 0.954065 0.75797 1.04098e+08 0.00919081 2.26403e+07 1.05581e+07 2.31305e+07 270 2.3377e+07 1.72496e+07 0.00595272 2.30955e+07 49.6971 0.00799818 0.961121 0 50.5355 GTEX-P4PQ-0626-SM-3NMCU 1 B1 4 ~4x3mm pieces. Squamous mucosa is ~8-10% of thickness 8.9 Esophagus Esophagus - Mucosa 0006920 195 1254 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989428 492198 0.976472 0.992148 0.853182 22866 1 76 0.00297547 217 0 9.4419e+07 0.0230578 512454 9.51663e+07 1.18748e+07 22881 4.69616e+07 0 0.123289 0.992148 0.846483 9.4419e+07 0.00447323 2.11404e+07 1.36529e+07 2.12423e+07 221 2.1305e+07 2.03693e+07 0.0037223 2.13303e+07 50.0296 0.00538483 0.994868 0 50.1203 GTEX-P4PQ-0726-SM-3NMCR 1 B1 4 ~8x4.5mm pieces 8.2 Esophagus Esophagus - Muscularis 0004648 196 1254 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.99237 251963 0.977852 0.994303 0.866361 23133 1 76 0.00272403 289 0 1.1825e+08 0.0218174 1.00951e+06 1.18928e+08 1.40418e+07 23160 5.89014e+07 0 0.111491 0.994303 0.861425 1.1825e+08 0.00402054 2.57322e+07 1.14308e+07 2.58543e+07 328 2.58352e+07 2.31501e+07 0.00337102 2.59643e+07 50.1247 0.00848847 0.996235 0 50.1183 GTEX-P4PQ-0926-SM-E9U4D 2 B1 2 ~8x8mm pieces 5.7 Spleen Spleen 0002106 151 1284 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.987591 300594 0.965491 0.988426 0.817885 23594 1 76 0.00264752 272 0 8.81592e+07 0.0319476 663575 8.91915e+07 3.15054e+06 23620 4.38447e+07 0 0.147607 0.988426 0.808419 8.81592e+07 0.00343096 1.95239e+07 1.88285e+07 1.96723e+07 271 1.96447e+07 1.36773e+07 0.00303891 1.9618e+07 49.966 0.00743989 0.989262 0 50.1894 GTEX-P4PQ-1026-SM-3NMCN 1 B1 2 ~9x9mm pieces; ~20-30% intermingled fat 6.6 Pancreas Pancreas 0001150 162 1278 BP-18708 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988533 265026 0.975877 0.990928 0.858864 22788 1 76 0.00304182 159 0 1.04148e+08 0.0237782 469767 1.05102e+08 1.25824e+07 22807 5.18302e+07 0 0.117012 0.990928 0.851073 1.04148e+08 0.00444336 2.38134e+07 3.47085e+07 2.4062e+07 174 2.40475e+07 3.00204e+07 0.00374089 2.40817e+07 50.0356 0.00446965 0.993324 0 50.2596 GTEX-P4PQ-1526-SM-3NMCK 1 B1 6 pieces; 3 with mucosa, ~1.2x5mm, well preserved 8.2 Stomach Stomach 0000945 203 1249 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989967 432666 0.974955 0.992612 0.852127 22951 1 76 0.00278394 211 0 9.09862e+07 0.0247459 562144 9.16634e+07 1.16783e+07 22975 4.52385e+07 0 0.122827 0.992612 0.845831 9.09862e+07 0.00433008 1.98088e+07 1.11965e+07 1.99511e+07 239 1.99734e+07 1.70494e+07 0.00355495 2.00229e+07 50.0619 0.0061327 0.995257 0 50.179 GTEX-P4PQ-1626-SM-2D43W 1 B1 2 ~11x7mm pieces, ~10-20% intermingled fat 8.4 Muscle Muscle - Skeletal 0011907 241 1216 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PQ-1626-SM-2HMKK 1 B1 2 ~11x7mm pieces, ~10-20% intermingled fat 8.4 Muscle Muscle - Skeletal 0011907 241 1216 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.951324 155191 0.974074 0.958792 0.84763 23020 1 76 0.0025588 280 0 1.09143e+08 0.0255492 2.79785e+06 1.13834e+08 1.59726e+07 23040 5.39743e+07 0 0.126444 0.958792 0.812701 1.09143e+08 0.00901271 2.33425e+07 1.54533e+07 2.37481e+07 301 2.40427e+07 2.03951e+07 0.00576062 2.37595e+07 49.7038 0.0245783 0.966261 0 50.4306 GTEX-P4PQ-1726-SM-3NB15 1 B1 4 ~2-3mm d. pieces of nerve with ~1mm rim of fat/fibrous tissue 6.9 Nerve Nerve - Tibial 0001323 246 1213 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985615 323210 0.97056 0.989878 0.791455 24415 1 76 0.00395038 186 0 8.95806e+07 0.0291534 346692 9.04965e+07 1.57936e+07 24442 4.44528e+07 0 0.179106 0.989878 0.783444 8.95806e+07 0.00590171 1.96111e+07 1.07291e+07 1.97784e+07 202 1.9844e+07 1.51485e+07 0.00492184 1.99139e+07 50.0879 0.003831 0.994142 0 50.2123 GTEX-P4PQ-2026-SM-E9U4E 1 B1 2 ~8.5x6.5mm pieces. Glandular and stromal hyperplasia 5.8 Prostate Prostate 0002367 185 1261 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-10742 04/16/2017 TruSeq.v1 RNASEQ 0.98757 577653 0.960976 0.988791 0.760548 25009 1 76 0.00195601 156 0 7.37404e+07 0.03882 589619 7.45763e+07 3.08081e+06 25045 3.67243e+07 0 0.200428 0.988791 0.752022 7.37404e+07 0.00290707 1.60545e+07 1.01904e+07 1.62071e+07 177 1.61564e+07 1.02451e+07 0.00243095 1.61945e+07 50.0589 0.00790625 0.990012 0 50.2364 GTEX-P4PQ-2126-SM-3NMCV 1 B1 11x6.4mm, slightly fragmented, well preserved 6 Testis Testis 0000473 249 1211 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-2385 12/16/2012 TruSeq.v1 EXCLUDE 0.990037 284871 0.945346 0.992199 0.744755 30593 1 76 0.00295108 205 0 9.52576e+07 0.054408 1.55311e+06 9.60065e+07 1.11008e+07 30662 4.74129e+07 0 0.200592 0.992199 0.738945 9.52576e+07 0.00420523 2.05834e+07 1.25056e+07 2.05804e+07 254 2.06212e+07 1.33264e+07 0.00357679 2.07276e+07 50.1286 0.0161771 0.994362 0 49.9964 GTEX-P4PQ-2626-SM-2D445 1 B1 2 ~11x7mm pieces 6.4 Thyroid Thyroid 0002046 182 1262 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4PQ-2626-SM-2HMKM 1 B1 2 ~11x7mm pieces 6.4 Thyroid Thyroid 0002046 182 1262 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.184292 39355 0.963288 0.20199 0.74681 21743 1 76 0.00410637 105 0 3.52176e+07 0.0361902 285828 1.74353e+08 6.11864e+07 21755 1.58833e+07 0 0.216477 0.20199 0.150848 3.52176e+07 0.0932287 6.90525e+06 5.51311e+06 7.15531e+06 115 8.48894e+06 4.73483e+06 0.0447632 8.27714e+06 49.3684 0.00163937 0.219688 0 50.8892 GTEX-P4PQ-2626-SM-33HC9 1 B1 2 ~11x7mm pieces 6.4 Thyroid Thyroid 0002046 182 1262 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.960977 1.4004e+06 0.961875 0.966136 0.712454 26079 1 76 0.00248533 332 0 1.36011e+08 0.0378706 823454 1.40778e+08 1.33948e+07 26158 6.72953e+07 0 0.249421 0.966136 0.688328 1.36011e+08 0.00722519 2.94948e+07 1.55194e+07 2.97775e+07 339 2.99313e+07 1.65954e+07 0.00484261 2.99984e+07 50.056 0.00584931 0.971295 0 50.2385 GTEX-P4PQ-2626-SM-5SI7K 1 B1 2 ~11x7mm pieces 6.4 Thyroid Thyroid 0002046 182 1262 BP-18709 RNA isolation_PAXgene Tissue miRNA 09/07/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.98849 263851 0.964288 0.991876 0.749576 23413 1 76 0.00203687 132 0 6.43981e+07 0.0354883 397645 6.49256e+07 5.74098e+06 23445 3.20139e+07 0 0.214712 0.991876 0.743487 6.43981e+07 0.00351958 1.40219e+07 7.8156e+06 1.40761e+07 151 1.40887e+07 8.90193e+06 0.00277569 1.42139e+07 50.2213 0.00612462 0.995261 0 50.0964 GTEX-P4QR-0004-SM-2H2X5 C1 Blood Whole Blood 0013756 275 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828040_R02C01 GTEX-P4QR-0004-SM-2XK1O C1 Blood Whole Blood 0013756 275 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R04C01 GTEX-P4QR-0004-SM-3USRX C1 Blood Whole Blood 0013756 275 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-P4QR-0004-SM-5JK2Q C1 Blood Whole Blood 0013756 275 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-P4QR-0006-SM-2I5GN C1 6.7 Blood Whole Blood 0013756 275 BP-18694 RNA isolation_PAXgene Blood RNA (Manual) 09/07/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 EXCLUDE 0.898104 963621 0.949601 0.903289 0.815977 19357 1 76 0.00328469 130 0 8.30883e+07 0.049698 589460 9.19842e+07 1.91009e+07 19366 4.1156e+07 0 0.133624 0.903289 0.737063 8.30883e+07 0.0111745 1.79546e+07 8.34416e+07 1.84597e+07 140 1.86092e+07 1.89263e+07 0.00720694 1.82527e+07 49.5164 0.00640827 0.908473 0 50.6936 GTEX-P4QR-0006-SM-2M49O C1 6.7 Blood Whole Blood 0013756 275 BP-18694 RNA isolation_PAXgene Blood RNA (Manual) 09/07/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QR-0008-SM-48TE2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 412 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.993788 481163 0.979863 0.995329 0.868563 19860 1 76 0.00138907 150 0 7.05759e+07 0.0198266 386902 7.09071e+07 3.44298e+06 19869 3.51474e+07 0 0.111299 0.995329 0.864506 7.05759e+07 0.00192973 1.584e+07 8.53893e+06 1.59183e+07 155 1.59685e+07 1.82694e+07 0.00165898 1.58999e+07 49.8924 0.00545646 0.99687 0 50.1233 GTEX-P4QR-0226-SM-3NMCH 2 C1 2 ~8x5mm pieces 6 Testis Testis 0000473 379 742 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-2385 12/16/2012 TruSeq.v1 EXCLUDE 0.988937 378667 0.943476 0.991305 0.738188 33198 1 76 0.00304475 216 0 1.00641e+08 0.0561733 1.30638e+06 1.01524e+08 1.22513e+07 33258 5.00617e+07 0 0.205288 0.991305 0.731769 1.00641e+08 0.00446738 2.15321e+07 1.83075e+07 2.15537e+07 219 2.16256e+07 1.70652e+07 0.00375437 2.16837e+07 50.067 0.0128677 0.993673 0 50.025 GTEX-P4QR-0326-SM-2M47P 1 C1 6 ~5-8x2.5mm pieces. Squamous epithelium is ~2% of specimen thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 411 712 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QR-0326-SM-2S1NU 1 C1 6 ~5-8x2.5mm pieces. Squamous epithelium is ~2% of specimen thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 411 712 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.184378 17152 0.97003 0.185701 0.786833 17790 1 76 0.00470536 111 0 1.16819e+07 0.0297525 115566 6.2907e+07 2.27215e+07 17795 5.7101e+06 0 0.183196 0.185701 0.146116 1.16819e+07 0.0101457 2.54702e+06 1.83952e+06 2.61334e+06 106 2.64217e+06 1.91037e+06 0.00740614 2.59472e+06 49.547 0.00183709 0.187024 0 50.6425 GTEX-P4QR-0326-SM-5SI8P 1 C1 6 ~5-8x2.5mm pieces. Squamous epithelium is ~2% of specimen thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 411 712 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990565 277215 0.974591 0.992931 0.810086 23251 1 76 0.00197219 174 0 7.67436e+07 0.0252142 837067 7.72899e+07 6.91986e+06 23274 3.81899e+07 0 0.164505 0.992931 0.804359 7.67436e+07 0.00324054 1.70469e+07 8.92047e+06 1.717e+07 195 1.71313e+07 1.28116e+07 0.00260485 1.72652e+07 50.1946 0.0108302 0.995298 0 50.1799 GTEX-P4QR-0426-SM-2M47O 1 C1 2 ~7x7mm pieces, well-fixed 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 414 715 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QR-0426-SM-2S1NV 1 C1 2 ~7x7mm pieces, well-fixed 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 414 715 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.590841 48853 0.972867 0.594048 0.77787 21037 1 76 0.00439591 113 0 3.78339e+07 0.0268234 123850 6.36883e+07 2.19753e+07 21055 1.86854e+07 0 0.194997 0.594048 0.462092 3.78339e+07 0.00998303 8.18862e+06 4.36003e+06 8.38017e+06 104 8.45439e+06 6.51236e+06 0.00717439 8.30587e+06 49.5569 0.00194463 0.597254 0 50.578 GTEX-P4QR-0726-SM-2I5GO 1 C1 2 pieces, ~ 9x7mm, areas of poor fixation 7.7 Muscle Muscle - Skeletal 0011907 445 693 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 EXCLUDE 0.952604 126701 0.978629 0.958209 0.856363 21835 1 76 0.00281277 288 0 1.05538e+08 0.0211424 2.25459e+06 1.10141e+08 2.10965e+07 21856 5.23351e+07 0 0.122267 0.958209 0.820574 1.05538e+08 0.00995604 2.28283e+07 1.34863e+07 2.32485e+07 300 2.33882e+07 1.89255e+07 0.00636351 2.32059e+07 49.8044 0.0204701 0.963814 0 50.456 GTEX-P4QR-0726-SM-2M49P 1 C1 2 pieces, ~ 9x7mm, areas of poor fixation 7.7 Muscle Muscle - Skeletal 0011907 445 693 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QR-1026-SM-2I5GP 2 C1 2 ~9x8mm pieces. Mild edema, focal mucus plugging in bronchioles 6.5 Lung Lung 0008952 476 666 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 EXCLUDE 0.959223 137318 0.97727 0.963477 0.747704 24859 1 76 0.00326524 273 0 1.1255e+08 0.0223803 2.0159e+06 1.16817e+08 2.20124e+07 24910 5.58369e+07 0 0.229567 0.963477 0.720395 1.1255e+08 0.010226 2.50126e+07 1.31335e+07 2.51583e+07 259 2.52491e+07 1.67214e+07 0.00673023 2.53727e+07 50.1221 0.0172569 0.967732 0 50.1452 GTEX-P4QR-1026-SM-2M49Q 2 C1 2 ~9x8mm pieces. Mild edema, focal mucus plugging in bronchioles 6.5 Lung Lung 0008952 476 666 BP-18830 RNA isolation_PAXgene Tissue miRNA 09/14/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QS-0003-SM-2H2X1 B1 Blood Whole Blood 0013756 -221 BP-18630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828041_R04C01 GTEX-P4QS-0003-SM-2XK1S B1 Blood Whole Blood 0013756 -221 BP-18630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R06C02 GTEX-P4QS-0003-SM-4X5ZO B1 Blood Whole Blood 0013756 -221 BP-18630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-P4QS-0003-SM-5JK4U B1 Blood Whole Blood 0013756 -221 BP-18630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/02/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-P4QS-0005-SM-2D447 B1 6.3 Blood Whole Blood 0013756 -221 BP-18694 RNA isolation_PAXgene Blood RNA (Manual) 09/07/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QS-0005-SM-2I3EY B1 6.3 Blood Whole Blood 0013756 -221 BP-18694 RNA isolation_PAXgene Blood RNA (Manual) 09/07/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.943529 729732 0.962931 0.948214 0.823907 14829 1 76 0.0026115 91 0 8.54923e+07 0.0360862 510629 9.01613e+07 9.75068e+06 14829 4.24013e+07 0 0.139023 0.948214 0.781241 8.54923e+07 0.00401762 1.91940e+07 1.45792e+08 2.03318e+07 138 2.04424e+07 2.41277e+07 0.00331108 1.94987e+07 48.8187 0.0056635 0.9529 0 51.4392 GTEX-P4QS-0008-SM-48TDY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 204 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993136 355628 0.979724 0.994877 0.873305 19180 1 76 0.00156748 122 0 5.2509e+07 0.0199318 182609 5.27794e+07 2.56095e+06 19190 2.61479e+07 0 0.10642 0.994877 0.86883 5.2509e+07 0.00215727 1.17454e+07 6.1005e+06 1.1821e+07 114 1.18614e+07 1.39113e+07 0.00186186 1.17992e+07 49.8685 0.00345985 0.996617 0 50.1603 GTEX-P4QS-0226-SM-3NB1U 1 B1 2 ~9x8mm pieces. Central ~75% of both is unfixed with large holes 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 202 385 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983807 356873 0.973314 0.988513 0.799449 23679 1 76 0.00410072 177 0 8.43618e+07 0.0263597 352116 8.53422e+07 1.5403e+07 23712 4.18222e+07 0 0.173865 0.988513 0.790266 8.43618e+07 0.00589334 1.8382e+07 9.89544e+06 1.8542e+07 180 1.86573e+07 1.49067e+07 0.00499276 1.86474e+07 49.9868 0.00412593 0.993219 0 50.2166 GTEX-P4QS-0326-SM-2D43U 1 B1 2 ~8x6mm pieces. Prominent acute infarct with polys/edema 8.8 Heart Heart - Left Ventricle 0006566 83 504 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QS-0326-SM-2I3EU 1 B1 2 ~8x6mm pieces. Prominent acute infarct with polys/edema 8.8 Heart Heart - Left Ventricle 0006566 83 504 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.923388 133575 0.978889 0.927369 0.857525 22335 1 76 0.00273979 207 0 8.30581e+07 0.0208074 1.30455e+06 8.95632e+07 9.46914e+06 22347 4.12247e+07 0 0.121365 0.927369 0.795242 8.30581e+07 0.00419941 1.80989e+07 8.6455e+06 1.87182e+07 212 1.88327e+07 1.67577e+07 0.00346646 1.8309e+07 49.295 0.0145657 0.931349 0 50.8411 GTEX-P4QS-0426-SM-3NMCQ 1 B1 6 ~7x1mm pieces 8.1 Blood Vessel Artery - Aorta 0001496 87 500 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991269 298948 0.974875 0.993342 0.844809 23288 1 76 0.00289078 281 0 1.11115e+08 0.024746 285819 1.1186e+08 1.30697e+07 23311 5.53136e+07 0 0.130066 0.993342 0.839184 1.11115e+08 0.00420988 2.40022e+07 1.00577e+07 2.4118e+07 324 2.4121e+07 2.17607e+07 0.00354896 2.42195e+07 50.1019 0.00255515 0.995415 0 50.1203 GTEX-P4QS-0526-SM-2D43T 1 B1 2 ~9x 6mm pieces. Moderate congestion 7.9 Lung Lung 0008952 101 486 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QS-0526-SM-2I3ET 1 B1 2 ~9x 6mm pieces. Moderate congestion 7.9 Lung Lung 0008952 101 486 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.976967 173220 0.9735 0.979474 0.817612 23868 1 76 0.00283135 206 0 8.46444e+07 0.0261167 501566 8.64183e+07 8.21932e+06 23891 4.20834e+07 0 0.155887 0.979474 0.800829 8.46444e+07 0.00397784 1.85532e+07 1.12267e+07 1.88225e+07 217 1.88569e+07 1.54965e+07 0.00340313 1.87207e+07 49.8188 0.00580393 0.981981 0 50.3602 GTEX-P4QS-0626-SM-3NMD1 1 B1 6 ~6x2mm pieces. Squamous mucosa is ~10% of thickness. Patchy focally intense chronic esophagitis 8.1 Esophagus Esophagus - Mucosa 0006920 120 467 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.986109 377951 0.972094 0.98845 0.818601 25226 1 76 0.00331102 282 0 1.06887e+08 0.0271394 434364 1.08136e+08 1.28486e+07 25260 5.31524e+07 0 0.153493 0.98845 0.809146 1.06887e+08 0.00465079 2.37358e+07 1.50197e+07 2.38197e+07 295 2.38601e+07 2.04092e+07 0.00397932 2.39345e+07 50.0779 0.00401684 0.990791 0 50.0882 GTEX-P4QS-0726-SM-3NMCZ 1 B1 6 ~6.5x4mm pieces 7.8 Esophagus Esophagus - Muscularis 0004648 124 463 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991992 257837 0.976211 0.994137 0.858563 22995 1 76 0.00301743 285 0 1.10752e+08 0.0234874 847219 1.11405e+08 1.32986e+07 23021 5.51358e+07 0 0.117649 0.994137 0.853529 1.10752e+08 0.00432865 2.40597e+07 1.23168e+07 2.41915e+07 326 2.41549e+07 2.00476e+07 0.00367162 2.43227e+07 50.173 0.00760487 0.996282 0 50.1365 GTEX-P4QS-0926-SM-48TBS 1 B1 2 ~7x6.5mm pieces, focally under-fixed, with holes/tears 6.7 Spleen Spleen 0002106 69 518 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989627 215759 0.966254 0.991143 0.790649 23117 1 76 0.00248666 131 0 6.36781e+07 0.0325139 369178 6.42472e+07 3.27085e+06 23137 3.16643e+07 0 0.175605 0.991143 0.783647 6.36781e+07 0.00321492 1.39723e+07 7.13342e+06 1.40817e+07 151 1.40908e+07 9.50579e+06 0.00285023 1.40543e+07 49.9352 0.00574621 0.99266 0 50.195 GTEX-P4QS-1026-SM-3NMCW 1 B1 2 ~7x8mm pieces, well preserved. Islets well represented. 6 Pancreas Pancreas 0001150 105 482 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990614 378795 0.969105 0.992999 0.823343 23335 1 76 0.00314984 161 0 9.6973e+07 0.0306068 253648 9.76567e+07 1.18499e+07 23360 4.82646e+07 0 0.145763 0.992999 0.817578 9.6973e+07 0.00451129 2.19333e+07 2.21877e+07 2.19802e+07 174 2.20273e+07 2.35963e+07 0.00382893 2.21214e+07 50.1065 0.00259734 0.995383 0 50.0535 GTEX-P4QS-1126-SM-3NMD5 1 B1 6 ~ 6.5x2-3mm pieces, all with glomeruli 6.4 Kidney Kidney - Cortex 0001225 157 430 BP-18727 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.993152 270676 0.977529 0.995077 0.84542 24121 1 76 0.00372774 271 0 1.30523e+08 0.022202 3.04002e+06 1.31169e+08 1.55471e+07 24150 6.50294e+07 0 0.132109 0.995077 0.841258 1.30523e+08 0.00495439 2.81916e+07 2.23783e+07 2.8667e+07 315 2.85296e+07 1.61759e+07 0.00433988 2.85299e+07 50.0003 0.0231764 0.997002 0 50.418 GTEX-P4QS-1326-SM-3NMCD 1 B1 2 ~ 8x6mm pieces. Both cortex and medulla well-preserved 8.8 Adrenal Gland Adrenal Gland 0002369 144 443 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.99266 371553 0.977018 0.99468 0.839076 23637 1 76 0.00320866 273 0 1.16368e+08 0.0225911 1.75471e+06 1.16991e+08 1.40088e+07 23663 5.79384e+07 0 0.137942 0.99468 0.834612 1.16368e+08 0.00447229 2.56147e+07 1.4347e+07 2.56623e+07 322 2.56739e+07 2.02239e+07 0.00383919 2.58164e+07 50.1383 0.0149987 0.996699 0 50.0464 GTEX-P4QS-1626-SM-2M474 1 B1 3 pieces, ~7x7mm pieces areas of underfixation 7.4 Muscle Muscle - Skeletal 0011907 213 374 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QS-1626-SM-2S1NH 1 B1 3 pieces, ~7x7mm pieces areas of underfixation 7.4 Muscle Muscle - Skeletal 0011907 213 374 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.715224 61388 0.980822 0.718931 0.876226 17477 1 76 0.00472105 106 0 4.19044e+07 0.0189159 587211 5.82871e+07 1.97227e+07 17477 2.0707e+07 0 0.104596 0.718931 0.629946 4.19044e+07 0.00779138 8.785e+06 6.50046e+06 9.16363e+06 104 9.22642e+06 7.75001e+06 0.0062483 8.91068e+06 49.1296 0.0100745 0.722639 0 51.0548 GTEX-P4QS-1726-SM-3NB1V 1 B1 2 pieces, central 0.5mm nerve, surrounded by rind of 0.5-1mm fat/fibrous tissue 6.7 Nerve Nerve - Tibial 0001323 224 363 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984097 436343 0.968836 0.988909 0.76925 24786 1 76 0.00416542 202 0 9.52169e+07 0.0308818 354885 9.62848e+07 1.73198e+07 24834 4.72093e+07 0 0.199586 0.988909 0.760718 9.52169e+07 0.00625302 2.07878e+07 1.21594e+07 2.09327e+07 205 2.10521e+07 1.53541e+07 0.00520414 2.11101e+07 50.0688 0.00368578 0.993721 0 50.1736 GTEX-P4QS-1826-SM-2M475 1 B1 2 ~2.5mm pieces, with 0.5-1mm rim of fat/fibrous tissue 6.7 Blood Vessel Artery - Tibial 0007610 227 360 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QS-1826-SM-2S1NI 1 B1 2 ~2.5mm pieces, with 0.5-1mm rim of fat/fibrous tissue 6.7 Blood Vessel Artery - Tibial 0007610 227 360 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.265222 23945 0.972134 0.267167 0.809223 18169 1 76 0.00470147 108 0 1.97915e+07 0.027517 113048 7.40793e+07 2.37278e+07 18173 9.73662e+06 0 0.162911 0.267167 0.216197 1.97915e+07 0.0085431 4.18682e+06 1.95472e+06 4.32519e+06 113 4.3725e+06 3.42291e+06 0.00660831 4.27146e+06 49.4155 0.00152604 0.269111 0 50.8128 GTEX-P4QS-2026-SM-3NMCG 1 B1 2 ~ 9x6mm pieces, one with stromal hyperplasia devoid of glands, the other with seminal vesicle 6.1 Prostate Prostate 0002367 177 410 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988483 234015 0.961723 0.990969 0.751349 25020 1 76 0.00320858 164 0 8.72754e+07 0.0380445 339744 8.80708e+07 1.03658e+07 25059 4.33949e+07 0 0.210375 0.990969 0.744563 8.72754e+07 0.0046889 1.8887e+07 9.84873e+06 1.89889e+07 196 1.901e+07 1.25209e+07 0.00394688 1.90721e+07 50.0815 0.00385763 0.993455 0 50.1345 GTEX-P4QS-2126-SM-3NMCF 1 B1 2 ~7.5x7mm pieces, good sperm maturation evident 7 Testis Testis 0000473 188 399 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990758 470719 0.926795 0.992725 0.739533 34074 1 76 0.00320766 281 0 1.09498e+08 0.0728921 1.12263e+06 1.10301e+08 1.29585e+07 34141 5.45293e+07 0 0.187262 0.992725 0.734153 1.09498e+08 0.00453745 2.26401e+07 2.43229e+07 2.28379e+07 278 2.28992e+07 1.74256e+07 0.00387124 2.27693e+07 49.8577 0.0101779 0.994692 0 50.2174 GTEX-P4QS-2626-SM-2D43V 1 B1 2 ~10x 3-7mm pieces 6.8 Thyroid Thyroid 0002046 96 491 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QS-2626-SM-2I3EV 1 B1 2 ~10x 3-7mm pieces 6.8 Thyroid Thyroid 0002046 96 491 BP-18728 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 RNASEQ 0.694622 269434 0.959696 0.696084 0.762806 25111 1 76 0.00378115 161 0 9.3543e+07 0.040032 624092 1.34385e+08 3.20869e+07 25158 4.61557e+07 0 0.19689 0.696084 0.530977 9.3543e+07 0.0104163 1.97869e+07 1.85816e+07 2.06864e+07 186 2.06205e+07 1.32687e+07 0.00709174 1.99987e+07 49.2346 0.00464407 0.697547 0 51.1112 GTEX-P4QT-0003-SM-2H2X3 B1 Blood Whole Blood 0013756 -169 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828040_R01C01 GTEX-P4QT-0003-SM-2XJZX B1 Blood Whole Blood 0013756 -169 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R03C02 GTEX-P4QT-0003-SM-3USRQ B1 Blood Whole Blood 0013756 -169 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-P4QT-0003-SM-5JK2P B1 Blood Whole Blood 0013756 -169 BP-18659 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/06/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-P4QT-0008-SM-48TDZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 214 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993501 526899 0.981731 0.995162 0.877902 19753 1 76 0.00146039 149 0 7.29151e+07 0.0179471 422234 7.32696e+07 3.77222e+06 19761 3.63198e+07 0 0.103829 0.995162 0.873655 7.29151e+07 0.00198878 1.63928e+07 8.39868e+06 1.65027e+07 159 1.65563e+07 1.94103e+07 0.00172414 1.64615e+07 49.8564 0.00576275 0.996823 0 50.1671 GTEX-P4QT-0126-SM-2I3FL 1 B1 6 ~5-6x 2.5mm pieces. Squamous epithelium is ~1% of specimen thickness 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 212 369 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.742275 94151 0.974925 0.746177 0.837286 21517 1 76 0.00265737 161 0 6.43126e+07 0.0248549 477065 8.61895e+07 1.19279e+07 21530 3.18481e+07 0 0.137639 0.746177 0.624763 6.43126e+07 0.00444948 1.39218e+07 6.77023e+06 1.41134e+07 152 1.42217e+07 1.1087e+07 0.00354874 1.41183e+07 49.8176 0.00553507 0.750078 0 50.3417 GTEX-P4QT-0226-SM-2D446 1 B1 2 pieces, ~8x8mm. One with focal central under-fixation 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 209 372 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QT-0226-SM-3LK68 1 B1 2 pieces, ~8x8mm. One with focal central under-fixation 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 209 372 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.972631 277115 0.974026 0.97337 0.811838 23963 1 76 0.00229459 283 0 9.76719e+07 0.0256046 330265 1.00344e+08 8.89241e+06 23996 4.85672e+07 0 0.162188 0.97337 0.790219 9.76719e+07 0.00340248 2.14451e+07 1.02226e+07 2.15901e+07 275 2.16062e+07 1.82959e+07 0.00284811 2.15061e+07 49.884 0.00329133 0.974109 0 50.1686 GTEX-P4QT-0526-SM-2D443 1 B1 2 ~7x5mm pieces. Chronic congestion, ? diffuse alveolar damage sequence 7.8 Lung Lung 0008952 111 470 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_96Affy3_Oct2011 11/24/2011 Affymetrix Expression EXCLUDE GTEX-P4QT-0526-SM-2I3EX 1 B1 2 ~7x5mm pieces. Chronic congestion, ? diffuse alveolar damage sequence 7.8 Lung Lung 0008952 111 470 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.976228 115889 0.973468 0.979127 0.804339 24156 1 76 0.00283561 205 0 8.80949e+07 0.0260936 412167 8.99729e+07 9.03789e+06 24191 4.37835e+07 0 0.169129 0.979127 0.78755 8.80949e+07 0.00409562 1.94451e+07 7.83074e+06 1.97727e+07 244 1.98519e+07 1.56153e+07 0.00346375 1.96038e+07 49.6855 0.00458101 0.982025 0 50.4176 GTEX-P4QT-0626-SM-3NMCP 1 B1 6 pieces ~4x4mm. Squamous mucosa is 10-15% of thickness 7.9 Esophagus Esophagus - Mucosa 0006920 132 449 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.987446 393385 0.975904 0.989703 0.821872 23855 1 76 0.0032648 217 0 9.0709e+07 0.0235033 581257 9.16528e+07 1.27143e+07 23877 4.50417e+07 0 0.154032 0.989703 0.813409 9.0709e+07 0.00457115 2.02809e+07 1.31807e+07 2.03529e+07 217 2.05585e+07 1.72564e+07 0.00391648 2.02712e+07 49.6482 0.00634195 0.99196 0 50.0885 GTEX-P4QT-0726-SM-3NMCM 1 B1 6 pieces, ~5-10x4mm. 7.9 Esophagus Esophagus - Muscularis 0004648 134 447 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990999 559389 0.979284 0.993319 0.876992 24102 1 76 0.00273864 391 0 2.16742e+08 0.020334 1.04663e+06 2.182e+08 2.79305e+07 24133 1.07848e+08 0 0.102293 0.993319 0.871132 2.16742e+08 0.00413491 4.69327e+07 2.225e+07 4.72564e+07 418 4.71562e+07 4.25377e+07 0.00343514 4.75095e+07 50.1866 0.00479666 0.995639 0 50.1718 GTEX-P4QT-0926-SM-EZ6KQ 2 B1 2 ~9x5mm pieces. 5.8 Spleen Spleen 0002106 106 475 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985396 139260 0.963736 0.987117 0.780739 22604 1 76 0.00330468 115 0 5.41343e+07 0.033589 168529 5.48408e+07 3.96132e+06 22623 2.68946e+07 0 0.182997 0.987117 0.770681 5.41343e+07 0.004796 1.19344e+07 8.52188e+06 1.19783e+07 122 1.19983e+07 8.1545e+06 0.00404904 1.19999e+07 50.0033 0.00307306 0.988838 0 50.0919 GTEX-P4QT-1326-SM-3NMD3 1 B1 2 ~9x5mm pieces, well-preserved 8 Adrenal Gland Adrenal Gland 0002369 89 492 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.98118 308857 0.979408 0.983398 0.850642 22974 1 76 0.00294807 372 0 1.10367e+08 0.0202495 1.89605e+06 1.12231e+08 1.35084e+07 23002 5.49235e+07 0 0.128766 0.983398 0.836519 1.10367e+08 0.0043064 2.4521e+07 1.30999e+07 2.45324e+07 332 2.45928e+07 1.76499e+07 0.0036257 2.46882e+07 50.0968 0.0168942 0.985615 0 50.0115 GTEX-P4QT-1426-SM-3NMCX 2 B1 6 well-preserved pieces, ~7x2mm. Mucosa is ~20-25% thickness. Areas of under-fixation with tears 6.6 Colon Colon - Transverse 0001157 148 433 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990211 278058 0.971808 0.992502 0.807806 24809 1 76 0.00311226 283 0 1.10142e+08 0.0277536 1.62689e+06 1.10975e+08 1.33842e+07 24847 5.48117e+07 0 0.164001 0.992502 0.801749 1.10142e+08 0.00446318 2.43794e+07 1.42612e+07 2.46003e+07 328 2.45792e+07 1.63555e+07 0.00378616 2.46225e+07 50.044 0.01466 0.994793 0 50.2255 GTEX-P4QT-1526-SM-3NMCT 1 B1 2 pieces. Mucosa extremely well-preserved, ~10 of thickness. Focal poor fixation with tears 7.2 Stomach Stomach 0000945 138 443 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990794 328169 0.973036 0.993232 0.857519 22147 1 76 0.00282218 281 0 9.27201e+07 0.0267035 616022 9.33519e+07 1.11994e+07 22170 4.61427e+07 0 0.115517 0.993232 0.851715 9.27201e+07 0.00434294 2.01688e+07 1.35249e+07 2.03343e+07 267 2.03075e+07 1.69373e+07 0.00358069 2.04122e+07 50.1286 0.00659892 0.995669 0 50.2043 GTEX-P4QT-1626-SM-2M47E 1 B1 2 ~8x4mm pieces, areas of poor fixation with tears/holes 8.3 Muscle Muscle - Skeletal 0011907 215 366 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QT-1626-SM-2S1NP 1 B1 2 ~8x4mm pieces, areas of poor fixation with tears/holes 8.3 Muscle Muscle - Skeletal 0011907 215 366 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.319976 28844 0.980943 0.322072 0.883486 16206 1 76 0.00440368 110 0 2.47887e+07 0.0187336 282189 7.69663e+07 2.83317e+07 16206 1.22065e+07 0 0.0974564 0.322072 0.284546 2.47887e+07 0.00929231 5.17994e+06 3.76055e+06 5.38684e+06 103 5.4507e+06 4.8181e+06 0.00683209 5.26023e+06 49.1109 0.0036664 0.324167 0 50.979 GTEX-P4QT-1626-SM-5S2UR 1 B1 2 ~8x4mm pieces, areas of poor fixation with tears/holes 8.3 Muscle Muscle - Skeletal 0011907 215 366 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.993179 239181 0.984772 0.994893 0.888234 19045 1 76 0.00183319 283 0 8.45309e+07 0.014928 1.06493e+06 8.49648e+07 8.26437e+06 19048 4.21207e+07 0 0.0965382 0.994893 0.883698 8.45309e+07 0.00278291 1.82795e+07 1.29706e+07 1.82822e+07 276 1.82585e+07 1.65927e+07 0.00230723 1.84361e+07 50.2421 0.0125338 0.996607 0 50.0038 GTEX-P4QT-1626-SM-DHXIR 1 B1 2 ~8x4mm pieces, areas of poor fixation with tears/holes 8.3 Muscle Muscle - Skeletal 0011907 215 366 BP-18729 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994389 436278 0.985799 0.995152 0.89387 19521 1 76 0.0021517 287 0 1.02828e+08 0.0138941 1.26902e+06 1.03329e+08 5.60144e+06 19527 5.12694e+07 0 0.0919287 0.995152 0.889536 1.02828e+08 0.00230672 2.22655e+07 1.38406e+07 2.25554e+07 320 2.25188e+07 2.09715e+07 0.00222915 2.23703e+07 49.8346 0.0122814 0.995914 0 50.3234 GTEX-P4QT-1726-SM-2M47C 2 B1 2 pieces, unusually poorly preserved. 1x2mm nerve is surround by fat/connective tissue, nerve is~40% of total specimen 7 Nerve Nerve - Tibial 0001323 219 362 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QT-1726-SM-2S1NQ 2 B1 2 pieces, unusually poorly preserved. 1x2mm nerve is surround by fat/connective tissue, nerve is~40% of total specimen 7 Nerve Nerve - Tibial 0001323 219 362 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.400705 51621 0.965815 0.403641 0.784299 20686 1 76 0.00468607 118 0 3.08009e+07 0.0338719 149578 7.63076e+07 2.95845e+07 20699 1.51553e+07 0 0.181517 0.403641 0.316575 3.08009e+07 0.00939587 6.6498e+06 4.13369e+06 6.82711e+06 105 6.91008e+06 4.93888e+06 0.00702384 6.77262e+06 49.4977 0.0019602 0.406578 0 50.6578 GTEX-P4QT-1826-SM-2M478 1 B1 2 pieces of 2 small arteries joined by connective tissue, each ~1mm in diameter. Focal atherosis 7.7 Blood Vessel Artery - Tibial 0007610 221 360 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P4QT-1826-SM-2S1NJ 1 B1 2 pieces of 2 small arteries joined by connective tissue, each ~1mm in diameter. Focal atherosis 7.7 Blood Vessel Artery - Tibial 0007610 221 360 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.37479 27203 0.971381 0.376218 0.823972 18477 1 76 0.00449186 104 0 2.18363e+07 0.0281994 82811 5.80417e+07 2.2111e+07 18482 1.07584e+07 0 0.14741 0.376218 0.309993 2.18363e+07 0.0087007 4.63283e+06 2.39736e+06 4.77148e+06 102 4.79686e+06 4.06104e+06 0.00658829 4.68154e+06 49.3917 0.00142675 0.377646 0 50.7372 GTEX-P4QT-2026-SM-3NMCJ 1 B1 No endometrial glands/ stroma. 2 ~ 6x8mm pieces, one with a 4.6x4mm leiomyoma. Some areas poorly fixed with tears/holes 7.8 Uterus Uterus 0000995 175 406 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991448 296608 0.968692 0.993571 0.783436 24152 1 76 0.00287505 219 0 9.82115e+07 0.0309156 233350 9.88469e+07 1.13006e+07 24196 4.8877e+07 0 0.185256 0.993571 0.7784 9.82115e+07 0.00426222 2.1512e+07 1.05822e+07 2.15477e+07 252 2.15805e+07 1.70198e+07 0.00356715 2.16796e+07 50.1145 0.00236072 0.995695 0 50.0416 GTEX-P4QT-2426-SM-3NMCL 1 B1 2 ~6.6x4.3mm pieces, post-menopausal stroma 7.3 Ovary Ovary 0000992 156 425 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990381 417178 0.965183 0.992721 0.745416 24439 1 76 0.00282412 277 0 1.11742e+08 0.0345724 309653 1.12561e+08 1.41061e+07 24502 5.55882e+07 0 0.219767 0.992721 0.73999 1.11742e+08 0.00406001 2.44925e+07 1.66987e+07 2.45401e+07 318 2.45939e+07 1.85181e+07 0.00344061 2.46924e+07 50.0999 0.00275098 0.995061 0 50.0485 GTEX-P4QT-2626-SM-2I3FM 1 B1 16.7x7.1mm. 1.8mm colloid cyst 6.7 Thyroid Thyroid 0002046 100 481 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.895117 118389 0.96802 0.898626 0.784607 24553 1 76 0.00269846 204 0 8.78308e+07 0.031586 625521 9.7739e+07 1.09971e+07 24590 4.35861e+07 0 0.183412 0.898626 0.705069 8.78308e+07 0.00404305 1.90181e+07 9.77455e+06 1.9503e+07 240 1.95807e+07 1.39505e+07 0.00336813 1.92354e+07 49.5552 0.00639991 0.902135 0 50.6294 GTEX-P4QT-2626-SM-2IZIN 1 B1 16.7x7.1mm. 1.8mm colloid cyst 6.7 Thyroid Thyroid 0002046 100 481 BP-18731 RNA isolation_PAXgene Tissue miRNA 09/08/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0004-SM-2MRIA C1 Blood Whole Blood 0013756 362 BP-18741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321051_R01C01 GTEX-P78B-0004-SM-2XK12 C1 Blood Whole Blood 0013756 362 BP-18741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R06C01 GTEX-P78B-0004-SM-4X5ZL C1 Blood Whole Blood 0013756 362 BP-18741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-P78B-0004-SM-5JK48 C1 Blood Whole Blood 0013756 362 BP-18741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/08/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-P78B-0005-SM-2I5GM C1 8.5 Blood Whole Blood 0013756 362 BP-18759 RNA isolation_PAXgene Blood RNA (Manual) 09/09/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 RNASEQ 0.78359 1.05354e+06 0.950096 0.794395 0.758522 20765 1 76 0.0038903 110 0 9.29782e+07 0.0487608 532164 1.17043e+08 3.58616e+07 20782 4.56354e+07 0 0.191573 0.794395 0.602566 9.29782e+07 0.0145532 2.0504e+07 1.08232e+08 2.07093e+07 133 2.11826e+07 2.00501e+07 0.00914925 2.12518e+07 50.0815 0.00454674 0.8052 0 50.2491 GTEX-P78B-0005-SM-2M49N C1 8.5 Blood Whole Blood 0013756 362 BP-18759 RNA isolation_PAXgene Blood RNA (Manual) 09/09/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0008-SM-48TE1 C1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 479 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992045 561362 0.973346 0.994101 0.8408 21040 1 76 0.00156779 289 0 8.73008e+07 0.0263201 239419 8.78188e+07 4.83517e+06 21060 4.34609e+07 0 0.132546 0.994101 0.83584 8.73008e+07 0.00217344 1.94537e+07 9.62149e+06 1.95251e+07 266 1.96679e+07 1.79204e+07 0.00186999 1.94795e+07 49.7595 0.00272628 0.996157 0 50.0915 GTEX-P78B-0226-SM-3NB1Z 1 C1 2 overly large pieces, 12x11 and 12.6x7 mm. Both with focal central under-fixation. Staining debris. 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 481 636 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985645 385717 0.970802 0.989959 0.796719 24470 1 76 0.0038594 280 0 1.07615e+08 0.0289202 913482 1.08706e+08 1.80208e+07 24508 5.33998e+07 0 0.174082 0.989959 0.78872 1.07615e+08 0.00567965 2.34584e+07 1.34381e+07 2.35876e+07 273 2.36884e+07 1.77311e+07 0.00476556 2.38004e+07 50.1179 0.0084032 0.994273 0 50.1373 GTEX-P78B-0426-SM-2I5F5 1 C1 2 pieces ~10x5mm. one piece partially fixed (fractures) 7.9 Heart Heart - Left Ventricle 0006566 532 587 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.818687 138565 0.980852 0.82415 0.857561 21512 1 76 0.00295948 149 0 8.52378e+07 0.0189218 2.31724e+06 1.03425e+08 2.18158e+07 21528 4.21736e+07 0 0.123292 0.82415 0.706759 8.52378e+07 0.0107622 1.85716e+07 1.14954e+07 1.92459e+07 196 1.93818e+07 1.38071e+07 0.006835 1.8887e+07 49.3536 0.022405 0.829613 0 50.8915 GTEX-P78B-0426-SM-2M48K 1 C1 2 pieces ~10x5mm. one piece partially fixed (fractures) 7.9 Heart Heart - Left Ventricle 0006566 532 587 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0526-SM-2I5F7 1 C1 2 ~9x7 mm pieces 7.2 Thyroid Thyroid 0002046 542 577 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 RNASEQ 0.616326 329475 0.960992 0.623485 0.768314 25225 1 76 0.00375819 132 0 8.76092e+07 0.038479 521233 1.40515e+08 4.17521e+07 25266 4.30189e+07 0 0.192678 0.623485 0.479032 8.76092e+07 0.0146295 1.88023e+07 1.7941e+07 1.91163e+07 149 1.95335e+07 1.42388e+07 0.00913142 1.9307e+07 49.7084 0.00370944 0.630645 0 50.414 GTEX-P78B-0526-SM-2M48M 1 C1 2 ~9x7 mm pieces 7.2 Thyroid Thyroid 0002046 542 577 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0626-SM-2M48C 1 C1 2 pieces, 4.4 and 4.9 mm fat/connective tissue, nerve is~25% of total specimen 6.8 Nerve Nerve - Tibial 0001323 544 576 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0626-SM-2S1O5 1 C1 2 pieces, 4.4 and 4.9 mm fat/connective tissue, nerve is~25% of total specimen 6.8 Nerve Nerve - Tibial 0001323 544 576 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.122852 15525 0.960271 0.124276 0.746352 16912 1 76 0.00498027 115 0 7.72031e+06 0.0394625 45876 6.21224e+07 2.37111e+07 16914 3.74839e+06 0 0.213918 0.124276 0.0927535 7.72031e+06 0.0118623 1.66049e+06 1.36424e+06 1.68959e+06 102 1.72719e+06 1.14126e+06 0.00838186 1.70384e+06 49.6597 0.000738478 0.1257 0 50.4343 GTEX-P78B-0626-SM-5S2W4 1 C1 2 pieces, 4.4 and 4.9 mm fat/connective tissue, nerve is~25% of total specimen 6.8 Nerve Nerve - Tibial 0001323 544 576 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.992308 272480 0.965977 0.993958 0.752579 24596 1 76 0.00200492 286 0 9.43289e+07 0.0337621 607336 9.49023e+07 8.48122e+06 24636 4.69698e+07 0 0.213399 0.993958 0.748031 9.43289e+07 0.00286572 2.07225e+07 9.63522e+06 2.08734e+07 267 2.08108e+07 1.41304e+07 0.00243461 2.09351e+07 50.1489 0.00639959 0.995608 0 50.1814 GTEX-P78B-0626-SM-DIPE1 1 C1 2 pieces, 4.4 and 4.9 mm fat/connective tissue, nerve is~25% of total specimen 6.8 Nerve Nerve - Tibial 0001323 544 576 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.99249 553805 0.96705 0.993648 0.760593 25097 1 76 0.00225008 386 0 1.10673e+08 0.0326764 651921 1.1138e+08 8.08874e+06 25155 5.51486e+07 0 0.206457 0.993648 0.755761 1.10673e+08 0.00319344 2.43371e+07 1.10359e+07 2.45243e+07 334 2.45148e+07 1.76631e+07 0.00272121 2.44689e+07 49.9532 0.0058531 0.994805 0 50.1916 GTEX-P78B-0726-SM-2M48A 1 C1 2 pieces of 2 muscular arteries ; slight intimal thickening. Focal atherosis 6.5 Blood Vessel Artery - Tibial 0007610 548 572 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-0726-SM-2S1O2 1 C1 2 pieces of 2 muscular arteries ; slight intimal thickening. Focal atherosis 6.5 Blood Vessel Artery - Tibial 0007610 548 572 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.461945 55351 0.968865 0.46561 0.797202 19342 1 76 0.00463859 107 0 3.22283e+07 0.0307893 268850 6.92173e+07 2.71193e+07 19350 1.58317e+07 0 0.171664 0.46561 0.371185 3.22283e+07 0.00998316 6.81896e+06 4.17617e+06 6.99901e+06 106 7.08931e+06 5.46908e+06 0.00728984 6.9577e+06 49.5315 0.00388414 0.469275 0 50.6515 GTEX-P78B-0826-SM-3NMCA 1 C1 6 pieces. 8x1.5mm. focal fatty deposit 7.6 Blood Vessel Artery - Aorta 0001496 550 571 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990009 260474 0.97176 0.992422 0.807026 23303 1 76 0.00291006 211 0 9.05469e+07 0.0278831 296589 9.12383e+07 1.16555e+07 23338 4.50191e+07 0 0.164734 0.992422 0.80091 9.05469e+07 0.00430573 1.94226e+07 9.43752e+06 1.95148e+07 224 1.95468e+07 1.60228e+07 0.0036062 1.96017e+07 50.0702 0.00325071 0.994835 0 50.1184 GTEX-P78B-0926-SM-2I5FA 1 C1 2 ~8 mm pieces. Emphysema, fibrosis 6.9 Lung Lung 0008952 554 567 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.948135 214230 0.968822 0.952712 0.780454 25057 1 76 0.00324377 159 0 9.06834e+07 0.0309381 1.03821e+06 9.51845e+07 1.80429e+07 25099 4.49829e+07 0 0.188368 0.952712 0.743548 9.06834e+07 0.0104677 1.99738e+07 1.34285e+07 2.00667e+07 188 2.01631e+07 1.24308e+07 0.00683837 2.02614e+07 50.1216 0.0109074 0.957288 0 50.116 GTEX-P78B-0926-SM-2M48P 1 C1 2 ~8 mm pieces. Emphysema, fibrosis 6.9 Lung Lung 0008952 554 567 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-1026-SM-3NMC4 1 C1 6 pieces ~7.5x1-2 mm 7.6 Esophagus Esophagus - Mucosa 0006920 561 561 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990051 215989 0.968869 0.992456 0.742607 24680 1 76 0.00291943 209 0 9.44846e+07 0.0309372 463515 9.52028e+07 1.19761e+07 24726 4.70014e+07 0 0.226262 0.992456 0.737005 9.44846e+07 0.00426075 2.10318e+07 1.23917e+07 2.11045e+07 222 2.11481e+07 1.4352e+07 0.00358846 2.12036e+07 50.0655 0.00486871 0.994862 0 50.0862 GTEX-P78B-1126-SM-3P615 1 C1 6 pieces, ~8.5x3 mm. well-oriented specimens. 7.8 Esophagus Esophagus - Muscularis 0004648 563 559 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952023 341487 0.97253 0.973594 0.815725 23670 1 76 0.00312874 276 0 1.10206e+08 0.0272209 974558 1.13195e+08 1.55122e+07 23702 5.37655e+07 0 0.156805 0.973594 0.794184 1.10206e+08 0.00445273 2.31216e+07 1.24427e+07 2.33565e+07 316 2.42847e+07 1.83794e+07 0.00377607 2.42972e+07 50.0129 0.00860958 0.995164 0 50.2527 GTEX-P78B-1226-SM-EZ6KP 1 C1 2 ~9x6 mm pieces. Capsule present 5.8 Spleen Spleen 0002106 570 553 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985678 187092 0.962197 0.987118 0.774647 24382 1 76 0.00289264 207 0 8.44775e+07 0.0367233 499698 8.55799e+07 6.30564e+06 24419 4.20568e+07 0 0.18755 0.987118 0.764668 8.44775e+07 0.00412589 1.85475e+07 1.19867e+07 1.86322e+07 237 1.8619e+07 1.2622e+07 0.00350837 1.86742e+07 50.0741 0.00583897 0.988559 0 50.1139 GTEX-P78B-1326-SM-3P611 1 C1 2 pieces ~8x7mm; mild steatosis 7.8 Liver Liver 0001114 573 550 BP-19089 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.953239 288385 0.976077 0.974651 0.834941 21942 1 76 0.00309912 269 0 1.04558e+08 0.0229474 1.19863e+06 1.07277e+08 1.39889e+07 21966 5.09979e+07 0 0.141135 0.974651 0.813777 1.04558e+08 0.00435586 2.20297e+07 1.80492e+07 2.21436e+07 294 2.3082e+07 2.01581e+07 0.00371368 2.30725e+07 49.9897 0.0111732 0.996063 0 50.129 GTEX-P78B-1626-SM-2M489 1 C1 2 ~8x7mm pieces, small areas of poor fixation with tears 8.1 Muscle Muscle - Skeletal 0011907 587 538 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-P78B-1626-SM-2S1O1 1 C1 2 ~8x7mm pieces, small areas of poor fixation with tears 8.1 Muscle Muscle - Skeletal 0011907 587 538 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.333818 43850 0.973258 0.336093 0.852822 16128 1 76 0.00451041 96 0 2.04606e+07 0.0265005 302084 6.08777e+07 2.57477e+07 16130 1.00391e+07 0 0.120436 0.336093 0.286628 2.04606e+07 0.00892621 4.34660e+06 3.3061e+06 4.51124e+06 102 4.56438e+06 3.73896e+06 0.00670337 4.41818e+06 49.1862 0.00496214 0.338368 0 50.9293 GTEX-P78B-1626-SM-5SI85 1 C1 2 ~8x7mm pieces, small areas of poor fixation with tears 8.1 Muscle Muscle - Skeletal 0011907 587 538 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991404 280127 0.980334 0.994031 0.870468 19367 1 76 0.00176217 210 0 7.84926e+07 0.0194372 1.27772e+06 7.89639e+07 7.23924e+06 19379 3.90719e+07 0 0.109867 0.994031 0.865272 7.84926e+07 0.00290116 1.72163e+07 1.02629e+07 1.71862e+07 229 1.71791e+07 1.50616e+07 0.00233016 1.74105e+07 50.3345 0.0161811 0.996658 0 49.9562 GTEX-P78B-1726-SM-3P5ZV 2 C1 6 pieces, Max 9x2mm. Tissue separation with tears 6.6 Colon Colon - Transverse 0001157 590 536 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.948175 548441 0.96669 0.97028 0.777031 25620 1 76 0.00342661 276 0 1.00965e+08 0.032267 837598 1.04058e+08 1.41771e+07 25661 4.91469e+07 0 0.189659 0.97028 0.753937 1.00965e+08 0.00490991 2.16365e+07 1.53841e+07 2.16436e+07 261 2.25767e+07 1.49557e+07 0.00415136 2.27285e+07 50.1675 0.00804933 0.992384 0 50.0082 GTEX-P78B-1826-SM-3P5YX 1 C1 6 pieces ~8.5x2mm. Slight to focally moderate chronic gastritis 6.5 Stomach Stomach 0000945 592 534 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.945712 304902 0.970414 0.967852 0.783255 24851 1 76 0.00382973 248 0 9.42367e+07 0.0276385 1.00364e+06 9.73669e+07 1.22452e+07 24887 4.5795e+07 0 0.187159 0.967852 0.758074 9.42367e+07 0.0054918 2.07597e+07 3.5189e+07 2.08054e+07 222 2.17388e+07 1.69508e+07 0.00464176 2.17822e+07 50.0499 0.0103078 0.989992 0 50.0549 GTEX-P78B-1926-SM-3P616 1 C1 2 ~7 x 6 mm post-menopausal stroma 7.7 Ovary Ovary 0000992 598 529 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.95246 444588 0.965696 0.973978 0.769637 24986 1 76 0.00309253 284 0 1.07952e+08 0.0340036 189514 1.10836e+08 1.38975e+07 25035 5.26561e+07 0 0.196059 0.973978 0.74961 1.07952e+08 0.00442435 2.31483e+07 1.49415e+07 2.32817e+07 264 2.43043e+07 2.06401e+07 0.00374373 2.4247e+07 49.941 0.00170986 0.995495 0 50.1437 GTEX-P78B-2226-SM-3P5ZZ 0 C1 6 ~8x3 mm pieces; well preserved squamous epithelium 0.13 mm thick 7.8 Vagina Vagina 0000996 606 523 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950034 442251 0.969668 0.97221 0.752258 25109 1 76 0.00320901 172 0 9.51e+07 0.0300674 185445 9.78184e+07 1.28649e+07 25153 4.63513e+07 0 0.21741 0.97221 0.731353 9.51e+07 0.00471236 2.06796e+07 1.42142e+07 2.07603e+07 191 2.17044e+07 1.70555e+07 0.00394354 2.16981e+07 49.9927 0.00189581 0.994387 0 50.0975 GTEX-P78B-2326-SM-EZ6KO 0 C1 4 ~5x3 mm pieces of fibromuscular stroma with virtually no epithelium; 5.8 Cervix Uteri Cervix - Ectocervix 0012249 609 520 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98726 217081 0.965086 0.988698 0.751413 25429 1 76 0.00254974 277 0 1.08179e+08 0.0346695 354213 1.09416e+08 8.22463e+06 25480 5.39079e+07 0 0.213673 0.988698 0.74292 1.08179e+08 0.00346705 2.36939e+07 1.0907e+07 2.37899e+07 276 2.37773e+07 1.69028e+07 0.00300773 2.38546e+07 50.0812 0.00323731 0.990136 0 50.101 GTEX-P78B-2426-SM-EWRM2 0 C1 4 ~5x2.5 mm pieces of fibromuscular stroma and one gland 5.5 Cervix Uteri Cervix - Endocervix 0000458 611 519 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984924 310184 0.954682 0.987552 0.725065 24335 1 76 0.00252729 136 0 7.22813e+07 0.0451306 483031 7.31923e+07 4.95404e+06 24376 3.59397e+07 0 0.229617 0.987552 0.71604 7.22813e+07 0.00312142 1.55609e+07 9.13578e+06 1.58245e+07 161 1.58061e+07 9.22186e+06 0.00281662 1.57515e+07 49.9134 0.00659947 0.990181 0 50.4199 GTEX-P78B-2526-SM-3P5ZY 1 C1 2 pieces: 10x2mm with abundant endometrium; 7.6x2 with little endometrium 8 Uterus Uterus 0000995 615 516 BP-19090 RNA isolation_PAXgene Tissue miRNA 09/27/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951146 395481 0.964333 0.972927 0.749018 24186 1 76 0.00315991 172 0 9.34016e+07 0.035421 188553 9.60006e+07 1.11644e+07 24229 4.55276e+07 0 0.215315 0.972927 0.72874 9.34016e+07 0.00475799 1.98704e+07 1.04721e+07 1.99888e+07 195 2.0828e+07 1.53583e+07 0.00394106 2.08844e+07 50.0677 0.00196408 0.994708 0 50.1485 GTEX-PLZ4-0003-SM-2IJGB C1 Blood Whole Blood 0013756 578 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101016_R01C01 GTEX-PLZ4-0003-SM-2XJZZ C1 Blood Whole Blood 0013756 578 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R02C01 GTEX-PLZ4-0003-SM-3UZF9 C1 Blood Whole Blood 0013756 578 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-PLZ4-0003-SM-5JK4H C1 Blood Whole Blood 0013756 578 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-5036 03/24/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PLZ4-0006-SM-2M47Z C1 7.5 Blood Whole Blood 0013756 578 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-0006-SM-2S1NY C1 7.5 Blood Whole Blood 0013756 578 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.250579 218876 0.919736 0.252494 0.705669 16032 1 76 0.00530941 93 0 1.58993e+07 0.0794017 67697 6.29688e+07 2.28808e+07 16032 7.79366e+06 0 0.214067 0.252494 0.178177 1.58993e+07 0.0111699 3.28855e+06 1.72157e+07 3.40400e+06 105 3.4554e+06 2.70706e+06 0.0082174 3.35057e+06 49.2299 0.00107509 0.25441 0 50.8625 GTEX-PLZ4-0006-SM-5SI8L C1 7.5 Blood Whole Blood 0013756 578 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.984491 466252 0.970253 0.988553 0.771125 19930 1 76 0.00274587 119 0 6.94883e+07 0.0286186 303498 7.0293e+07 7.23704e+06 19942 3.44714e+07 0 0.199128 0.988553 0.762298 6.94883e+07 0.00430883 1.53448e+07 3.5677e+07 1.55582e+07 135 1.56245e+07 1.33383e+07 0.00352414 1.55671e+07 49.9079 0.00431762 0.992615 0 50.3452 GTEX-PLZ4-0006-SM-CYPR7 C1 7.5 Blood Whole Blood 0013756 578 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993087 439715 0.971801 0.993999 0.77604 19738 1 76 0.00288965 121 0 7.28536e+07 0.0270575 333184 7.32935e+07 5.11063e+06 19753 3.62733e+07 0 0.195762 0.993999 0.771382 7.28536e+07 0.00381588 1.62503e+07 3.55018e+07 1.63442e+07 141 1.63391e+07 1.42528e+07 0.00335234 1.63312e+07 49.9878 0.00454589 0.99491 0 50.1441 GTEX-PLZ4-0008-SM-48TE6 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 653 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993525 368715 0.978769 0.995205 0.867134 19885 1 76 0.00142617 146 0 6.38413e+07 0.0208732 229087 6.41489e+07 3.32811e+06 19894 3.18003e+07 0 0.111635 0.995205 0.862976 6.38413e+07 0.00199503 1.421e+07 6.88772e+06 1.43371e+07 143 1.43841e+07 1.60511e+07 0.00171012 1.42701e+07 49.8012 0.00357118 0.996886 0 50.2227 GTEX-PLZ4-0126-SM-2QU4D 1 C1 6 ~10x1.5mm pieces. Squamous epithelium is ~1-1.5% of aliquot thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 652 843 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-0126-SM-2S1OG 1 C1 6 ~10x1.5mm pieces. Squamous epithelium is ~1-1.5% of aliquot thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 652 843 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.223702 20993 0.970595 0.226014 0.796505 18319 1 76 0.00482012 114 0 1.32395e+07 0.0291429 84100 5.8578e+07 2.42005e+07 18324 6.47414e+06 0 0.17409 0.226014 0.180021 1.32395e+07 0.010648 2.84778e+06 1.99458e+06 2.92510e+06 102 2.9804e+06 2.08951e+06 0.00770423 2.91826e+06 49.4732 0.00143569 0.228326 0 50.6697 GTEX-PLZ4-0126-SM-5SI8O 1 C1 6 ~10x1.5mm pieces. Squamous epithelium is ~1-1.5% of aliquot thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 652 843 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.989685 306774 0.973395 0.992677 0.8038 23460 1 76 0.00203469 176 0 7.30028e+07 0.0263814 502577 7.35413e+07 7.33529e+06 23481 3.63114e+07 0 0.169595 0.992677 0.797914 7.30028e+07 0.00322991 1.60042e+07 8.99076e+06 1.61436e+07 185 1.61162e+07 1.16181e+07 0.0026305 1.62433e+07 50.1965 0.00683394 0.995669 0 50.2168 GTEX-PLZ4-0226-SM-2M482 2 C1 2 ~9x9mm pieces, well-fixed 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 656 840 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-0226-SM-2S1NW 2 C1 2 ~9x9mm pieces, well-fixed 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 656 840 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.335298 69418 0.967816 0.33775 0.786053 19273 1 76 0.00474121 101 0 2.35840e+07 0.0318471 180735 6.9827e+07 2.5638e+07 19280 1.1583e+07 0 0.181763 0.33775 0.265489 2.35840e+07 0.00969428 5.08121e+06 4.74752e+06 5.22901e+06 104 5.29727e+06 3.89886e+06 0.00719976 5.17071e+06 49.3955 0.00258833 0.340202 0 50.7168 GTEX-PLZ4-0226-SM-5SI7M 2 C1 2 ~9x9mm pieces, well-fixed 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 656 840 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989481 346600 0.97574 0.992891 0.806032 23301 1 76 0.00210995 207 0 8.59471e+07 0.0239434 629510 8.65625e+07 8.73942e+06 23329 4.27253e+07 0 0.169708 0.992891 0.800302 8.59471e+07 0.00330854 1.88865e+07 1.00338e+07 1.90435e+07 214 1.90643e+07 1.49278e+07 0.00270719 1.91509e+07 50.1133 0.00727231 0.9963 0 50.2069 GTEX-PLZ4-0226-SM-CYPR1 2 C1 2 ~9x9mm pieces, well-fixed 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 656 840 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.992126 779271 0.975641 0.99359 0.803041 25541 1 76 0.00358558 379 0 1.53985e+08 0.024043 1.1546e+06 1.54978e+08 1.42378e+07 25586 7.66753e+07 0 0.1726 0.99359 0.797894 1.53985e+08 0.00540171 3.39457e+07 1.72815e+07 3.41585e+07 404 3.41595e+07 2.71136e+07 0.00449231 3.41724e+07 50.0094 0.00745009 0.995054 0 50.1562 GTEX-PLZ4-0726-SM-2QU59 2 C1 2 ~9.5x6mm pieces. Moderate congestion. 7.3 Lung Lung 0008952 682 820 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-0726-SM-2TC6Q 2 C1 2 ~9.5x6mm pieces. Moderate congestion. 7.3 Lung Lung 0008952 682 820 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.572955 147706 0.972627 0.576765 0.777667 22992 1 76 0.00338045 98 0 6.21682e+07 0.0269171 167174 1.07788e+08 2.37965e+07 23010 3.06978e+07 0 0.194961 0.576765 0.448531 6.21682e+07 0.0177151 1.36026e+07 9.59254e+06 1.37093e+07 105 1.38526e+07 1.08198e+07 0.0105004 1.38373e+07 49.9725 0.00155095 0.580574 0 50.1953 GTEX-PLZ4-0926-SM-2QU4F 1 C1 2 ~7x7mm pieces. Interstitial fat is ~10% of both aliquots. Areas of under-fixation with holes/tears 7.2 Muscle Muscle - Skeletal 0011907 680 824 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-0926-SM-2S1OI 1 C1 2 ~7x7mm pieces. Interstitial fat is ~10% of both aliquots. Areas of under-fixation with holes/tears 7.2 Muscle Muscle - Skeletal 0011907 680 824 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.742764 115372 0.96508 0.746527 0.811672 19380 1 76 0.00448593 106 0 5.11838e+07 0.0347288 1.0222e+06 6.85625e+07 2.50925e+07 19395 2.52817e+07 0 0.153409 0.746527 0.605935 5.11838e+07 0.00832481 1.08973e+07 1.20439e+07 1.13948e+07 110 1.14524e+07 8.10893e+06 0.0063957 1.10642e+07 49.1381 0.014909 0.75029 0 51.1157 GTEX-PLZ4-1126-SM-EZ6KT 2 C1 2 ~ 4x3mm pieces, each ~10% fat intermingled 5.8 Nerve Nerve - Tibial 0001323 684 826 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989692 259838 0.96754 0.991115 0.749457 24437 1 76 0.00260243 222 0 9.23376e+07 0.0322092 411623 9.31655e+07 7.07564e+06 24481 4.60092e+07 0 0.218083 0.991115 0.742798 9.23376e+07 0.00358099 2.0283e+07 8.69054e+06 2.03768e+07 251 2.03661e+07 1.42392e+07 0.00309101 2.04163e+07 50.0615 0.00441819 0.992538 0 50.1154 GTEX-PLZ4-1226-SM-2I5FE 2 C1 "2 ~9x8mm pieces, extensive regressive change? ""burned-out"" Hashimoto's dz" 6.2 Thyroid Thyroid 0002046 687 824 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.913127 236019 0.958172 0.920613 0.734661 25381 1 76 0.00314405 162 0 9.33181e+07 0.0415249 599125 1.01365e+08 1.9864e+07 25430 4.60455e+07 0 0.223511 0.920613 0.676339 9.33181e+07 0.010335 2.0128e+07 1.3687e+07 2.01586e+07 166 2.04034e+07 1.43501e+07 0.00671026 2.05728e+07 50.2067 0.00591056 0.9281 0 50.038 GTEX-PLZ4-1226-SM-2M48Q 2 C1 "2 ~9x8mm pieces, extensive regressive change? ""burned-out"" Hashimoto's dz" 6.2 Thyroid Thyroid 0002046 687 824 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-1326-SM-2QU2W 2 C1 2 ~ 4x3mm pieces; 50% of aliquot is fat/connective tissue 6.3 Blood Vessel Artery - Tibial 0007610 688 823 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ4-1326-SM-2S1O7 2 C1 2 ~ 4x3mm pieces; 50% of aliquot is fat/connective tissue 6.3 Blood Vessel Artery - Tibial 0007610 688 823 BP-19215 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.530338 38671 0.969123 0.532509 0.791769 19798 1 76 0.00451671 112 0 3.23326e+07 0.0305252 166072 6.07174e+07 2.09755e+07 19810 1.59764e+07 0 0.177354 0.532509 0.421624 3.23326e+07 0.0091561 6.85826e+06 3.09172e+06 7.0505e+06 103 7.08413e+06 5.6877e+06 0.00682695 6.94439e+06 49.5019 0.00273516 0.534681 0 50.6911 GTEX-PLZ4-1626-SM-3P618 1 C1 6 ~6x2mm pieces. Squamous mucosa is ~10% of specimen thickness1 7.6 Esophagus Esophagus - Mucosa 0006920 695 819 BP-19216 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949908 473172 0.966679 0.971781 0.750265 23613 1 76 0.00328045 200 0 9.90311e+07 0.0329048 421812 1.01907e+08 1.30581e+07 23646 4.82635e+07 0 0.216414 0.971781 0.729094 9.90311e+07 0.00470103 2.1623e+07 1.76308e+07 2.16856e+07 207 2.26455e+07 1.66973e+07 0.00397476 2.26861e+07 50.0448 0.00413919 0.993654 0 50.0723 GTEX-PLZ4-2226-SM-EZ6KS 2 C1 2 (stroma); 4 ~5x3mm pieces; no visible mucosal/glands 5.9 Cervix Uteri Cervix - Endocervix 0000458 712 809 BP-19216 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988493 291999 0.968133 0.989955 0.780403 24280 1 76 0.00245241 281 0 1.06443e+08 0.0315908 364375 1.07523e+08 7.53097e+06 24317 5.30352e+07 0 0.187731 0.989955 0.772564 1.06443e+08 0.00369515 2.30478e+07 1.22256e+07 2.3183e+07 306 2.31476e+07 1.95939e+07 0.00307286 2.32362e+07 50.0956 0.0033888 0.991417 0 50.1461 GTEX-PLZ4-2326-SM-EYYV5 3 C1 2 ~ 4mm d. pieces. Mucosa totally autolyzed/sloughed 5.6 Fallopian Tube Fallopian Tube 0003889 714 809 BP-19216 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982332 374546 0.965527 0.985837 0.770025 23439 1 76 0.00237992 168 0 7.79782e+07 0.0341679 274084 7.90985e+07 3.27498e+06 23465 3.87241e+07 0 0.195502 0.985837 0.759119 7.79782e+07 0.00373006 1.67624e+07 1.20792e+07 1.6967e+07 172 1.69955e+07 1.38638e+07 0.00305259 1.69996e+07 50.0061 0.0034651 0.989341 0 50.3033 GTEX-PLZ4-2726-SM-3P61A 1 C1 6 ~ 7.5x1.5mm pieces. Squamous mucosa, partially sloughed, on 3; less than 1% of specimen thickness 6.4 Vagina Vagina 0000996 727 799 BP-19216 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950086 295657 0.968224 0.971913 0.753328 25311 1 76 0.00326633 219 0 1.0509e+08 0.0314525 368683 1.08127e+08 1.42606e+07 25352 5.12281e+07 0 0.214896 0.971913 0.732169 1.0509e+08 0.0048309 2.27176e+07 1.44062e+07 2.27351e+07 226 2.37277e+07 1.86338e+07 0.00403105 2.38498e+07 50.1283 0.00340971 0.993741 0 50.0192 GTEX-PLZ4-2826-SM-3P617 1 C1 2 ~7x5mm pieces. Numerous corpora albicantia 6 Ovary Ovary 0000992 730 798 BP-19216 RNA isolation_PAXgene Tissue miRNA 10/04/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950494 353851 0.964878 0.972364 0.741301 24299 1 76 0.00314912 182 0 1.00612e+08 0.0348804 416597 1.03472e+08 1.36693e+07 24350 4.90302e+07 0 0.223577 0.972364 0.720814 1.00612e+08 0.00458309 2.14758e+07 1.59435e+07 2.156e+07 202 2.24967e+07 1.894e+07 0.00384998 2.25524e+07 50.0618 0.00402619 0.994233 0 50.0978 GTEX-PLZ5-0003-SM-2H2X9 B1 Blood Whole Blood 0013756 -178 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTExBatch2_SNP5M_Nov11 12/12/2011 Illumina OMNI SNP Array OMNI 6293828040_R04C01 GTEX-PLZ5-0003-SM-2XK1R B1 Blood Whole Blood 0013756 -178 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R04C01 GTEX-PLZ5-0003-SM-3UZFG B1 Blood Whole Blood 0013756 -178 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-PLZ5-0003-SM-5JK3C B1 Blood Whole Blood 0013756 -178 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PLZ5-0003-SM-AXTS8 B1 Blood Whole Blood 0013756 -178 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-8709 03/24/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-PLZ5-0006-SM-2M47Y B1 8.1 Blood Whole Blood 0013756 -178 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ5-0006-SM-2S1NZ B1 8.1 Blood Whole Blood 0013756 -178 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.261861 526348 0.845338 0.263452 0.653678 16539 1 76 0.0049066 103 0 1.92828e+07 0.154159 81010 7.31929e+07 2.74429e+07 16542 9.48843e+06 0 0.19166 0.263452 0.172213 1.92828e+07 0.00994514 3.66406e+06 3.8276e+07 3.8428e+06 115 3.88732e+06 3.20895e+06 0.00741066 3.72691e+06 48.9467 0.0011068 0.265043 0 51.1905 GTEX-PLZ5-0006-SM-5S2W5 B1 8.1 Blood Whole Blood 0013756 -178 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.988713 795794 0.954097 0.990546 0.801518 19495 1 76 0.0023746 122 0 7.69204e+07 0.0451799 283892 7.76545e+07 7.59952e+06 19504 3.82733e+07 0 0.152579 0.990546 0.793941 7.69204e+07 0.00374954 1.69464e+07 7.03199e+07 1.71944e+07 142 1.71761e+07 1.72212e+07 0.0030608 1.71204e+07 49.9188 0.00365583 0.992379 0 50.3631 GTEX-PLZ5-0006-SM-DIPE2 B1 8.1 Blood Whole Blood 0013756 -178 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.986303 1.07669e+06 0.957108 0.987448 0.812243 20294 1 76 0.00256178 189 0 1.09256e+08 0.0423193 386638 1.10645e+08 8.55218e+06 20313 5.44238e+07 0 0.144865 0.987448 0.802048 1.09256e+08 0.00357287 2.42586e+07 9.77764e+07 2.44789e+07 204 2.44789e+07 2.60608e+07 0.00306674 2.44161e+07 49.9357 0.0034944 0.988593 0 50.226 GTEX-PLZ5-0326-SM-3P614 1 B1 2 ~3x8mm pieces. All cortex, well-preserved 8.1 Adrenal Gland Adrenal Gland 0002369 66 1226 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952103 375876 0.975366 0.97386 0.812799 23632 1 76 0.00318412 270 0 1.01305e+08 0.0243213 984463 1.04024e+08 1.39326e+07 23667 4.94159e+07 0 0.162566 0.97386 0.791553 1.01305e+08 0.0046403 2.16766e+07 1.39535e+07 2.18532e+07 286 2.27696e+07 1.6679e+07 0.00389594 2.27367e+07 49.9639 0.00946377 0.995617 0 50.2029 GTEX-PLZ5-0426-SM-3P612 1 B1 6 ~ 8.5 x 2mm pieces 8 Blood Vessel Artery - Aorta 0001496 93 1200 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951614 324679 0.973331 0.97346 0.824495 23230 1 76 0.00315231 210 0 9.54659e+07 0.0262784 225404 9.80686e+07 1.25129e+07 23258 4.65599e+07 0 0.148836 0.97346 0.802613 9.54659e+07 0.00460706 2.03544e+07 8.84358e+06 2.05204e+07 255 2.14091e+07 1.78429e+07 0.00386336 2.1357e+07 49.939 0.00229843 0.995307 0 50.203 GTEX-PLZ5-0626-SM-2I5F8 0 B1 2 ~12x7mm pieces; one is ~30% epicardial fat 8.1 Heart Heart - Left Ventricle 0006566 120 1174 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.958405 154211 0.986208 0.964914 0.864753 21551 1 76 0.00305162 266 0 1.11049e+08 0.0136109 4.03359e+06 1.15087e+08 2.25509e+07 21562 5.5016e+07 0 0.121455 0.964914 0.834412 1.11049e+08 0.010065 2.38798e+07 2.47594e+07 2.47309e+07 286 2.46258e+07 1.60162e+07 0.00653467 2.44417e+07 49.8124 0.0350482 0.971423 0 50.8754 GTEX-PLZ5-0626-SM-2M48N 0 B1 2 ~12x7mm pieces; one is ~30% epicardial fat 8.1 Heart Heart - Left Ventricle 0006566 120 1174 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ5-0726-SM-2I5F9 1 B1 2 ~6.5x5mm pieces. Well preserved; no inflammation; pronounced emphasymatous changes 7.8 Lung Lung 0008952 123 1172 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 RNASEQ 0.6875 159828 0.968215 0.694502 0.780765 25576 1 76 0.00392636 156 0 9.44469e+07 0.0312745 663953 1.35992e+08 4.22084e+07 25618 4.64805e+07 0 0.18745 0.694502 0.542243 9.44469e+07 0.0140003 2.05432e+07 1.15717e+07 2.08717e+07 172 2.11934e+07 1.44459e+07 0.00891254 2.11055e+07 49.8961 0.00488228 0.701503 0 50.3965 GTEX-PLZ5-0726-SM-2M48O 1 B1 2 ~6.5x5mm pieces. Well preserved; no inflammation; pronounced emphasymatous changes 7.8 Lung Lung 0008952 123 1172 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ5-0826-SM-3P5ZW 1 B1 6 ~8x4mm pieces 7.1 Esophagus Esophagus - Muscularis 0004648 124 1173 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952877 283609 0.975027 0.974273 0.822549 24301 1 76 0.00306986 287 0 1.21645e+08 0.0246882 914895 1.24857e+08 1.60005e+07 24336 5.93755e+07 0 0.152478 0.974273 0.801387 1.21645e+08 0.00434867 2.60777e+07 1.39392e+07 2.62965e+07 317 2.736e+07 2.09344e+07 0.00369522 2.73692e+07 50.0084 0.00732756 0.995669 0 50.2088 GTEX-PLZ5-0826-SM-4E3JR 1 B1 6 ~8x4mm pieces 7.1 Esophagus Esophagus - Muscularis 0004648 124 1173 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.986957 421039 0.97564 0.991008 0.830696 23073 1 76 0.00255075 214 0 8.7115e+07 0.0240991 625825 8.79055e+07 1.01439e+07 23095 4.32742e+07 0 0.144944 0.991008 0.823226 8.7115e+07 0.00440748 1.90757e+07 8.68873e+06 1.91889e+07 223 1.92769e+07 1.47913e+07 0.00347532 1.93237e+07 50.0606 0.0071193 0.995059 0 50.1479 GTEX-PLZ5-0926-SM-3TW8L 1 B1 4 ~ 3x2.5mm pieces; mucosae is ~10 of specimen thickness 9.2 Esophagus Esophagus - Mucosa 0006920 126 1172 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.990559 449700 0.970404 0.992048 0.803499 24534 1 76 0.00264211 285 0 1.17651e+08 0.0291793 479088 1.18594e+08 1.54888e+07 24565 5.86173e+07 0 0.166905 0.992048 0.79711 1.17651e+08 0.0040133 2.63398e+07 2.45328e+07 2.64895e+07 298 2.6508e+07 2.24297e+07 0.00332668 2.64845e+07 49.9778 0.00403974 0.993538 0 50.1417 GTEX-PLZ5-0926-SM-4RGM9 1 B1 4 ~ 3x2.5mm pieces; mucosae is ~10 of specimen thickness 9.2 Esophagus Esophagus - Mucosa 0006920 126 1172 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-3879 09/26/2013 TruSeq.v1 EXCLUDE 0.990501 465113 0.976293 0.992352 0.814669 23139 1 76 0.0023297 214 0 8.73672e+07 0.0233133 357145 8.80405e+07 7.57625e+06 23163 4.34977e+07 0 0.161625 0.992352 0.808438 8.73672e+07 0.00285133 1.96542e+07 1.3083e+07 1.98178e+07 218 1.98223e+07 1.68477e+07 0.00259003 1.98064e+07 49.98 0.0040566 0.994204 0 50.2073 GTEX-PLZ5-1126-SM-3P613 1 B1 6 ~5-6mm pieces. Areas of poor fixation. Mucosa is ~ 10% specimen thickness 7.8 Colon Colon - Transverse 0001157 140 1160 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949645 434820 0.968875 0.971469 0.794868 24571 1 76 0.00362734 280 0 1.00454e+08 0.0293207 1.35393e+06 1.03405e+08 1.31232e+07 24611 4.88998e+07 0 0.174007 0.971469 0.77219 1.00454e+08 0.00514955 2.17735e+07 1.66765e+07 2.1953e+07 286 2.28094e+07 1.44887e+07 0.00437135 2.29006e+07 50.0997 0.0130935 0.993293 0 50.2053 GTEX-PLZ5-1226-SM-EXOHA 2 B1 6 ~10x4mm pieces; mucosa is ~25% specimen thickness but with partial-total autolysis 5.5 Stomach Stomach 0000945 152 1148 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.986248 247090 0.980436 0.988629 0.856439 22917 1 76 0.00205458 283 0 8.17888e+07 0.0191032 482965 8.27295e+07 4.54891e+06 22934 4.06741e+07 0 0.123997 0.988629 0.8467 8.17888e+07 0.00364059 1.85196e+07 4.93335e+07 1.86956e+07 236 1.86695e+07 1.83176e+07 0.00284567 1.87274e+07 50.0775 0.00583788 0.991009 0 50.2364 GTEX-PLZ5-1526-SM-3P5ZX 1 B1 2 ~ 8 .56mm pieces, one with attached 7x4mm piece of fibrous tissue 6.6 Testis Testis 0000473 168 1139 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951226 362446 0.945967 0.972599 0.776445 33403 1 76 0.00326378 278 0 1.16369e+08 0.053748 2.12377e+06 1.19648e+08 1.6003e+07 33474 5.67897e+07 0 0.169522 0.972599 0.75517 1.16369e+08 0.00454433 2.44385e+07 1.80121e+07 2.45282e+07 302 2.55887e+07 1.81843e+07 0.00388999 2.55716e+07 49.9833 0.0177502 0.993973 0 50.0916 GTEX-PLZ5-1626-SM-3NB21 1 B1 2 ~ 2.5x1mm nerve pieces; attached fat is ~ 50% of each aliquot 6.2 Nerve Nerve - Tibial 0001323 200 1107 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.982483 382738 0.965659 0.987771 0.765281 25333 1 76 0.00406112 214 0 9.50592e+07 0.0340955 440723 9.62361e+07 1.64986e+07 25369 4.70979e+07 0 0.200378 0.987771 0.755923 9.50592e+07 0.00601874 2.06881e+07 1.2138e+07 2.08611e+07 224 2.09609e+07 1.33187e+07 0.00503469 2.10703e+07 50.1302 0.0045796 0.993059 0 50.2082 GTEX-PLZ5-1726-SM-2I5F6 1 B1 2 ~ 9x4.5mm pieces. Areas of underfixation, tears/holes. ~ 10% interspersed fat 8 Muscle Muscle - Skeletal 0011907 208 1100 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.807821 156028 0.978632 0.812189 0.863799 19770 1 76 0.00291754 141 0 7.57498e+07 0.0211608 2.1501e+06 9.32662e+07 1.82181e+07 19779 3.75505e+07 0 0.114834 0.812189 0.701567 7.57498e+07 0.010502 1.63615e+07 1.25363e+07 1.6677e+07 161 1.67311e+07 1.26376e+07 0.00668935 1.6613e+07 49.8229 0.0230533 0.816557 0 50.4776 GTEX-PLZ5-1726-SM-2M48L 1 B1 2 ~ 9x4.5mm pieces. Areas of underfixation, tears/holes. ~ 10% interspersed fat 8 Muscle Muscle - Skeletal 0011907 208 1100 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ5-1826-SM-3NB22 1 B1 2 ~13x9mm pieces. Well fixed 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 203 1151 BP-19181 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984697 388961 0.974753 0.98949 0.80661 24183 1 76 0.00394416 215 0 1.01944e+08 0.0249449 518883 1.03026e+08 1.85151e+07 24220 5.05547e+07 0 0.168143 0.98949 0.798132 1.01944e+08 0.00583346 2.23365e+07 1.1228e+07 2.25207e+07 245 2.26384e+07 1.71321e+07 0.00488423 2.26851e+07 50.0515 0.0050364 0.994282 0 50.2053 GTEX-PLZ5-2026-SM-2M48B 1 B1 6 ~7x2mm pieces; squamous epithelium is ~ 2-3% of specimen thickness 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 210 1146 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ5-2026-SM-2S1O4 1 B1 6 ~7x2mm pieces; squamous epithelium is ~ 2-3% of specimen thickness 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 210 1146 BP-19182 RNA isolation_PAXgene Tissue miRNA 10/03/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.423302 30594 0.965581 0.424437 0.78272 20516 1 76 0.00464629 123 0 2.69995e+07 0.0342268 193461 6.36125e+07 2.30042e+07 20524 1.32982e+07 0 0.182861 0.424437 0.332216 2.69995e+07 0.00858791 5.82163e+06 3.42778e+06 5.98023e+06 104 5.98498e+06 3.90723e+06 0.00661183 5.87772e+06 49.5479 0.00304124 0.425572 0 50.6719 GTEX-PLZ6-0003-SM-2IJGD B1 Blood Whole Blood 0013756 -240 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101016_R02C01 GTEX-PLZ6-0003-SM-2XK1U B1 Blood Whole Blood 0013756 -240 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R04C01 GTEX-PLZ6-0003-SM-3UZFH B1 Blood Whole Blood 0013756 -240 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-PLZ6-0003-SM-5JK4W B1 Blood Whole Blood 0013756 -240 BP-18956 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/19/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PLZ6-0006-SM-2I5FQ B1 7.6 Blood Whole Blood 0013756 -241 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 EXCLUDE 0.3735 625725 0.953946 0.379634 0.784476 19229 1 76 0.00424835 85 0 7.43009e+07 0.0445652 555709 1.95717e+08 6.6781e+07 19236 3.6242e+07 0 0.16947 0.379634 0.297814 7.43009e+07 0.0304025 1.63012e+07 9.46038e+07 1.65976e+07 103 1.70792e+07 1.67038e+07 0.0171142 1.69792e+07 49.8532 0.00283935 0.385768 0 50.4505 GTEX-PLZ6-0006-SM-2M48W B1 7.6 Blood Whole Blood 0013756 -241 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ6-0006-SM-33HBZ B1 7.6 Blood Whole Blood 0013756 -241 BP-18940 RNA isolation_PAXgene Blood RNA (Manual) 09/19/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.93762 841406 0.959342 0.941839 0.781508 19378 1 76 0.00277536 179 0 1.31114e+08 0.037169 1.10038e+06 1.3921e+08 1.66661e+07 19398 6.47118e+07 0 0.177834 0.941839 0.736055 1.31114e+08 0.00780682 2.85636e+07 8.86137e+07 2.97054e+07 224 2.95827e+07 2.698e+07 0.00527982 2.92313e+07 49.7013 0.00790446 0.946058 0 50.9798 GTEX-PLZ6-0008-SM-48TD5 B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 219 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992748 409042 0.976116 0.994554 0.845698 20053 1 76 0.00150582 150 0 6.76923e+07 0.0235142 149245 6.8063e+07 3.60787e+06 20067 3.37124e+07 0 0.130418 0.994554 0.841092 6.76923e+07 0.00198835 1.5086e+07 6.93689e+06 1.51789e+07 158 1.52473e+07 1.48194e+07 0.00174665 1.51328e+07 49.8115 0.00219275 0.996359 0 50.1535 GTEX-PLZ6-0126-SM-48TC6 1 B1 2, ~11x7 mm pieces. Moderate congestion. Capsule present 7.9 Spleen Spleen 0002106 75 1267 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990701 284819 0.962137 0.992707 0.781751 23988 1 76 0.002066 161 0 7.52458e+07 0.0372351 653858 7.57986e+07 4.13494e+06 24011 3.74443e+07 0 0.180387 0.992707 0.776049 7.52458e+07 0.00267021 1.65055e+07 1.05864e+07 1.65814e+07 184 1.66203e+07 1.167e+07 0.0023675 1.66091e+07 49.9831 0.00862625 0.994714 0 50.1148 GTEX-PLZ6-0226-SM-3P61I 1 B1 2, ~3x7mm adrenal cortex and medulla, well preserved. 3x0.6mm attached nerve in one 8.5 Adrenal Gland Adrenal Gland 0002369 117 1226 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951818 376801 0.973057 0.973362 0.814787 24994 1 76 0.00309617 273 0 1.12908e+08 0.0266433 1.90768e+06 1.15998e+08 1.49698e+07 25035 5.50992e+07 0 0.15827 0.973362 0.793083 1.12908e+08 0.00446251 2.44202e+07 1.73728e+07 2.45864e+07 319 2.55729e+07 1.85051e+07 0.00376422 2.56351e+07 50.0607 0.0164458 0.994906 0 50.1696 GTEX-PLZ6-0326-SM-3P61J 1 B1 6 pieces. 10x1.3mm. no fatty deposits. Sparse adherent stroma 7.2 Blood Vessel Artery - Aorta 0001496 133 1210 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950207 473386 0.970057 0.972474 0.794761 23421 1 76 0.0031105 211 0 9.70618e+07 0.0295945 381748 9.98091e+07 1.31254e+07 23448 4.72851e+07 0 0.175295 0.972474 0.772885 9.70618e+07 0.00474574 2.05728e+07 1.04441e+07 2.06764e+07 218 2.15594e+07 1.70728e+07 0.00390939 2.16447e+07 50.0988 0.00382478 0.994742 0 50.1255 GTEX-PLZ6-0426-SM-2I5FG 1 B1 2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia 8.9 Lung Lung 0008952 140 1205 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 EXCLUDE 0.813022 120429 0.97349 0.817981 0.817689 24561 1 76 0.00311758 135 0 8.08957e+07 0.0260374 500953 9.88968e+07 2.00253e+07 24586 4.00469e+07 0 0.155801 0.817981 0.668854 8.08957e+07 0.0113143 1.78036e+07 8.14762e+06 1.8095e+07 154 1.82767e+07 1.54349e+07 0.0071911 1.80712e+07 49.7174 0.00506541 0.82294 0 50.4058 GTEX-PLZ6-0426-SM-2M48R 1 B1 2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia 8.9 Lung Lung 0008952 140 1205 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PLZ6-0426-SM-5IFK2 1 B1 2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia 8.9 Lung Lung 0008952 140 1205 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.991046 293237 0.975307 0.992694 0.854854 24559 1 76 0.00334423 275 0 1.01612e+08 0.0242846 549397 1.0236e+08 7.08256e+06 24580 5.05883e+07 0 0.120452 0.992694 0.848609 1.01612e+08 0.00399877 2.24396e+07 1.01546e+07 2.27658e+07 304 2.2672e+07 1.82505e+07 0.00367096 2.26938e+07 50.0241 0.00536731 0.994342 0 50.3608 GTEX-PLZ6-0426-SM-5IJDW 1 B1 2 ~10x7 & 8x7mm pieces. Patchy bronchopneumonia 8.9 Lung Lung 0008952 140 1205 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.991693 324555 0.972229 0.993758 0.864545 24386 1 76 0.00282939 375 0 1.01788e+08 0.027434 587325 1.02427e+08 1.19206e+07 24406 5.06446e+07 0 0.107684 0.993758 0.859148 1.01788e+08 0.0043208 2.24063e+07 1.16716e+07 2.26049e+07 358 2.24239e+07 1.66038e+07 0.00357354 2.28029e+07 50.419 0.00573407 0.995822 0 50.2207 GTEX-PLZ6-0526-SM-3P61C 1 B1 6 pieces,~5 mm sq with well preserved epithelium (0.25 mm thick) 9.6 Esophagus Esophagus - Mucosa 0006920 151 1195 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951882 265929 0.976631 0.973458 0.829466 22834 1 76 0.00316184 281 0 9.87234e+07 0.0228425 562272 1.01415e+08 1.3115e+07 22856 4.81734e+07 0 0.147165 0.973458 0.80745 9.87234e+07 0.00450426 2.17326e+07 1.58248e+07 2.18952e+07 266 2.28325e+07 2.04425e+07 0.00381817 2.27856e+07 49.9486 0.00554426 0.995033 0 50.1863 GTEX-PLZ6-0626-SM-3P61B 1 B1 5 pieces, ~9x4.5 mm. well-oriented specimens. 8.5 Esophagus Esophagus - Muscularis 0004648 157 1193 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952355 370887 0.975089 0.973979 0.819876 22818 1 76 0.00301663 282 0 1.0695e+08 0.0246192 1.02147e+06 1.09807e+08 1.42272e+07 22845 5.21734e+07 0 0.155213 0.973979 0.798542 1.0695e+08 0.00446736 2.25218e+07 1.16515e+07 2.26959e+07 303 2.35824e+07 1.85278e+07 0.00372589 2.36911e+07 50.1149 0.00930242 0.995604 0 50.1925 GTEX-PLZ6-0626-SM-5J1P1 1 B1 5 pieces, ~9x4.5 mm. well-oriented specimens. 8.5 Esophagus Esophagus - Muscularis 0004648 157 1193 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4816 03/22/2014 TruSeq.v1 EXCLUDE 0.990581 319069 0.974704 0.992087 0.816608 22590 1 76 0.00379419 278 0 9.91064e+07 0.0250199 935743 9.98969e+07 5.06964e+06 22614 4.93041e+07 0 0.158096 0.992087 0.810146 9.91064e+07 0.00441294 2.13157e+07 9.74448e+06 2.14244e+07 266 2.13564e+07 1.68123e+07 0.0041031 2.15254e+07 50.1971 0.00936709 0.993593 0 50.1272 GTEX-PLZ6-0626-SM-5K7WJ 1 B1 5 pieces, ~9x4.5 mm. well-oriented specimens. 8.5 Esophagus Esophagus - Muscularis 0004648 157 1193 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4818 03/13/2014 TruSeq.v1 EXCLUDE 0.987886 327589 0.975082 0.989777 0.81507 22664 1 76 0.00423719 283 0 1.04121e+08 0.0246291 983800 1.05196e+08 6.73220e+06 22689 5.1778e+07 0 0.160012 0.989777 0.806737 1.04121e+08 0.00459624 2.22866e+07 1.23706e+07 2.24644e+07 269 2.24154e+07 1.82388e+07 0.00441637 2.2522e+07 50.1186 0.00935203 0.991668 0 50.1986 GTEX-PLZ6-0726-SM-3P619 0 B1 2, ~ 10x8 mm pieces,<1% fat; focal fixation fractures 6.8 Pancreas Pancreas 0001150 171 1182 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952351 281669 0.977386 0.973838 0.838599 22703 1 76 0.00327155 154 0 1.13891e+08 0.0223933 207131 1.1695e+08 1.52109e+07 22729 5.55965e+07 0 0.138787 0.973838 0.816659 1.13891e+08 0.00459514 2.56698e+07 3.577e+07 2.60183e+07 184 2.7069e+07 3.33548e+07 0.00391874 2.69725e+07 49.9107 0.0017711 0.995324 0 50.3371 GTEX-PLZ6-0826-SM-3P61K 1 B1 6 pieces, ~7x4.5mm. Very good mucosal (0.87mm) preservation in 2 pieces; none in others 8.1 Stomach Stomach 0000945 180 1174 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.95152 387239 0.974139 0.973634 0.808817 24043 1 76 0.00306107 279 0 1.10175e+08 0.0255968 650565 1.13158e+08 1.46337e+07 24085 5.37241e+07 0 0.165322 0.973634 0.787491 1.10175e+08 0.00452086 2.35041e+07 1.24475e+07 2.36608e+07 319 2.46598e+07 1.91729e+07 0.00377439 2.47046e+07 50.0453 0.00574917 0.995747 0 50.1661 GTEX-PLZ6-0926-SM-3P5ZQ 1 B1 4 pieces, 7x2mm. Good mucosal preservation. Tissue separation with tears 7.7 Colon Colon - Transverse 0001157 188 1167 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951222 259007 0.973503 0.972597 0.818101 24957 1 76 0.00344826 279 0 1.10839e+08 0.025014 1.61467e+06 1.13962e+08 1.54564e+07 24990 5.40302e+07 0 0.155402 0.972597 0.795682 1.10839e+08 0.00469077 2.40386e+07 1.78276e+07 2.41323e+07 305 2.50713e+07 1.6909e+07 0.00405586 2.52323e+07 50.1601 0.0141684 0.993972 0 50.0972 GTEX-PLZ6-1126-SM-3P5ZR 1 B1 2 ~10x10 & 9 x 6mm; focal atrophy 7.3 Prostate Prostate 0002367 194 1164 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950849 424056 0.95976 0.972997 0.744873 25904 1 76 0.00322212 203 0 9.38901e+07 0.03996 541156 9.64958e+07 1.28828e+07 25947 4.57621e+07 0 0.214887 0.972997 0.724759 9.38901e+07 0.00479196 2.00099e+07 1.3756e+07 2.01163e+07 215 2.09658e+07 1.30729e+07 0.00398917 2.10395e+07 50.0878 0.00560808 0.995145 0 50.1326 GTEX-PLZ6-1226-SM-3P5ZS 1 B1 2 pieces ~10mm sq; >60% atrophic, sclerotic tubules; remainder with minimal spermatogenesis. Capsule partially present. 6.7 Testis Testis 0000473 199 1160 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951471 353673 0.951377 0.973108 0.735152 32181 1 76 0.00316031 168 0 9.29339e+07 0.0483254 520338 9.55022e+07 1.23162e+07 32240 4.53256e+07 0 0.216226 0.973108 0.715382 9.29339e+07 0.00454646 1.96235e+07 1.22711e+07 1.96997e+07 193 2.05756e+07 1.45794e+07 0.00383797 2.05457e+07 49.9637 0.00544844 0.994744 0 50.0969 GTEX-PLZ6-1326-SM-3NB24 1 B1 2 pieces, 10.5x8 & 11.5x7 mm. No fixation artifacts. Adherent vessel, 1 x 3 mm 6 Adipose Tissue Adipose - Subcutaneous 0002190 224 1137 BP-19254 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.987479 434499 0.976201 0.991327 0.81278 24014 1 76 0.00375658 379 0 1.26159e+08 0.0235155 777879 1.27263e+08 2.14563e+07 24054 6.26578e+07 0 0.163422 0.991327 0.80573 1.26159e+08 0.00545213 2.76601e+07 1.53476e+07 2.78174e+07 367 2.79519e+07 2.11244e+07 0.00460107 2.79859e+07 50.0304 0.00611238 0.995175 0 50.1417 GTEX-PLZ6-1426-SM-2QU4V 1 B1 6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation) 7 Skin Skin - Sun Exposed (Lower leg) 0004264 231 1131 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ6-1426-SM-2S1OQ 1 B1 6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation) 7 Skin Skin - Sun Exposed (Lower leg) 0004264 231 1131 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.325576 45332 0.968259 0.327623 0.79434 19970 1 76 0.00461869 134 0 2.74792e+07 0.0315298 202081 8.38746e+07 3.20645e+07 19980 1.35256e+07 0 0.173919 0.327623 0.260244 2.74792e+07 0.0099192 5.89339e+06 4.30921e+06 6.0432e+06 103 6.09875e+06 4.31241e+06 0.00725238 5.9936e+06 49.5652 0.00240932 0.32967 0 50.6275 GTEX-PLZ6-1426-SM-5S2TR 1 B1 6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation) 7 Skin Skin - Sun Exposed (Lower leg) 0004264 231 1131 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.99141 312563 0.97053 0.99359 0.803465 22775 1 76 0.00199462 193 0 7.43041e+07 0.0292646 549773 7.47834e+07 7.35277e+06 22798 3.6979e+07 0 0.167065 0.99359 0.798314 7.43041e+07 0.00339336 1.61977e+07 9.91663e+06 1.63076e+07 187 1.62463e+07 1.20409e+07 0.00269246 1.64236e+07 50.2713 0.00735153 0.99577 0 50.169 GTEX-PLZ6-1426-SM-DKPOT 1 B1 6 ~10x3.7 mm (maximum) pieces. Fragmented dermis in 2 pieces (poor fixation) 7 Skin Skin - Sun Exposed (Lower leg) 0004264 231 1131 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991299 392751 0.972052 0.993502 0.812874 24118 1 76 0.00279046 394 0 1.07226e+08 0.0277289 775900 1.07928e+08 1.08168e+07 24147 5.33941e+07 0 0.159178 0.993502 0.807592 1.07226e+08 0.00306705 2.33024e+07 1.37322e+07 2.36528e+07 336 2.36618e+07 1.84214e+07 0.00292845 2.35219e+07 49.8518 0.00718907 0.995705 0 50.3731 GTEX-PLZ6-1526-SM-2QU3D 1 B1 2 pieces ~9x8 & 6x7 mm pieces, large areas (>50%) with tears in the larger piece, probable poor fixation 7.9 Muscle Muscle - Skeletal 0011907 242 1121 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ6-1526-SM-2S1OC 1 B1 2 pieces ~9x8 & 6x7 mm pieces, large areas (>50%) with tears in the larger piece, probable poor fixation 7.9 Muscle Muscle - Skeletal 0011907 242 1121 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.540219 49550 0.978116 0.542985 0.861806 18164 1 76 0.00424256 101 0 3.63712e+07 0.0216498 349964 6.69838e+07 2.46475e+07 18169 1.79608e+07 0 0.11631 0.542985 0.467948 3.63712e+07 0.00888253 7.74196e+06 4.91907e+06 8.04319e+06 103 8.09822e+06 6.77438e+06 0.00655073 7.8529e+06 49.231 0.00522461 0.54575 0 50.9542 GTEX-PLZ6-1626-SM-3NB23 1 B1 2 pieces of 2 muscular arteries about 2mm in diameter; calcified deposits in intima; 10% adherent fat in one piece 7.3 Blood Vessel Artery - Tibial 0007610 244 1122 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984397 442133 0.971971 0.98891 0.800292 23114 1 76 0.00393177 278 0 1.08249e+08 0.0276625 488445 1.09462e+08 1.97212e+07 23157 5.36565e+07 0 0.171679 0.98891 0.791417 1.08249e+08 0.00575069 2.32363e+07 1.01894e+07 2.34237e+07 264 2.35447e+07 1.88498e+07 0.00483708 2.35764e+07 50.0337 0.00446222 0.993424 0 50.2009 GTEX-PLZ6-1726-SM-2QU2Z 1 B1 2 pieces, ~4 mm fat/connective tissue <10% of total specimen 6.8 Nerve Nerve - Tibial 0001323 249 1118 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PLZ6-1726-SM-2S1O6 1 B1 2 pieces, ~4 mm fat/connective tissue <10% of total specimen 6.8 Nerve Nerve - Tibial 0001323 249 1118 BP-19256 RNA isolation_PAXgene Tissue miRNA 10/05/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.401783 57555 0.963139 0.404317 0.748399 21008 1 76 0.00466295 116 0 3.06213e+07 0.0365768 126639 7.57359e+07 2.84807e+07 21023 1.508e+07 0 0.21474 0.404317 0.30259 3.06213e+07 0.00966383 6.60909e+06 4.36872e+06 6.77274e+06 102 6.84512e+06 4.54636e+06 0.00714772 6.7142e+06 49.5173 0.00167211 0.40685 0 50.6115 GTEX-POMQ-0003-SM-2H2X7 B1 Blood Whole Blood 0013756 -58 BP-19072 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2011 GTExBatch2_SNP5M_Nov11 12/14/2011 Illumina OMNI SNP Array OMNI 6293828040_R03C01 GTEX-POMQ-0003-SM-2IJGF B1 Blood Whole Blood 0013756 -58 BP-19072 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array EXCLUDE 6298101016_R03C01 GTEX-POMQ-0003-SM-2XK11 B1 Blood Whole Blood 0013756 -58 BP-19072 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R04C02 GTEX-POMQ-0003-SM-4X5ZM B1 Blood Whole Blood 0013756 -58 BP-19072 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-POMQ-0003-SM-5JK46 B1 Blood Whole Blood 0013756 -58 BP-19072 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/26/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-POMQ-0006-SM-2I5F4 B1 8.5 Blood Whole Blood 0013756 -58 BP-19063 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.208656 442934 0.958679 0.231447 0.786103 18606 1 76 0.00415636 84 0 6.154e+07 0.0390086 155485 2.65892e+08 1.10329e+08 18609 2.75353e+07 0 0.172576 0.231447 0.181941 6.154e+07 0.105345 1.25328e+07 8.52814e+07 1.28467e+07 112 1.55778e+07 1.44848e+07 0.0497687 1.5398e+07 49.7097 0.000584766 0.254238 0 50.6184 GTEX-POMQ-0006-SM-2M48J B1 8.5 Blood Whole Blood 0013756 -58 BP-19063 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-0006-SM-33HBY B1 8.5 Blood Whole Blood 0013756 -58 BP-19063 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2011 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.48819 232358 0.971759 0.495086 0.822735 19668 1 76 0.002311 90 0 5.23553e+07 0.0276353 169740 1.0575e+08 1.65397e+07 19672 2.55614e+07 0 0.149024 0.495086 0.407325 5.23553e+07 0.00904515 1.18981e+07 4.78551e+07 1.19825e+07 105 1.22937e+07 1.27087e+07 0.00563118 1.22768e+07 49.9655 0.00160511 0.501982 0 50.1768 GTEX-POMQ-0006-SM-5SI7D B1 8.5 Blood Whole Blood 0013756 -58 BP-19063 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.982286 550584 0.968206 0.984486 0.806951 18379 1 76 0.00202026 104 0 7.79841e+07 0.0304097 134102 7.9213e+07 8.34518e+06 18386 3.87852e+07 0 0.161256 0.984486 0.794432 7.79841e+07 0.00335393 1.78674e+07 8.52269e+07 1.80699e+07 137 1.80515e+07 1.93327e+07 0.00268561 1.80716e+07 50.0278 0.00169293 0.986687 0 50.2818 GTEX-POMQ-0008-SM-48TE7 B1 8.8 Skin Cells - Cultured fibroblasts EFO_0002009 355 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991498 545531 0.974044 0.993775 0.849705 21258 1 76 0.00162832 221 0 7.76707e+07 0.0255978 219550 7.81573e+07 4.12958e+06 21270 3.86597e+07 0 0.124339 0.993775 0.844415 7.76707e+07 0.00220967 1.72326e+07 8.78035e+06 1.73293e+07 206 1.74427e+07 1.66337e+07 0.00191833 1.72857e+07 49.7739 0.00280908 0.996051 0 50.1399 GTEX-POMQ-0126-SM-48TD6 1 B1 2 pieces, 6x8mm; moderately congested 7.3 Spleen Spleen 0002106 162 1467 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989471 214943 0.970104 0.991096 0.795398 22495 1 76 0.002616 116 0 5.54811e+07 0.0280001 188695 5.59795e+07 2.90291e+06 22512 2.75759e+07 0 0.174706 0.991096 0.788316 5.54811e+07 0.0033903 1.23523e+07 9.46894e+06 1.2401e+07 127 1.24308e+07 9.2785e+06 0.00300252 1.24103e+07 49.9588 0.00337079 0.992721 0 50.0983 GTEX-POMQ-0326-SM-2I5FO 1 B1 2 pieces, 7x5 & 7x8mm; includes papillary muscles 8.1 Heart Heart - Left Ventricle 0006566 214 1419 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.968274 192990 0.982175 0.972867 0.847972 22325 1 76 0.00321322 269 0 1.23168e+08 0.0175646 3.45138e+06 1.26603e+08 2.46633e+07 22349 6.11533e+07 0 0.134203 0.972867 0.824964 1.23168e+08 0.0104523 2.67645e+07 2.69627e+07 2.71293e+07 295 2.69745e+07 1.93217e+07 0.00681567 2.72608e+07 50.2639 0.0272614 0.977461 0 50.3384 GTEX-POMQ-0326-SM-2M48U 1 B1 2 pieces, 7x5 & 7x8mm; includes papillary muscles 8.1 Heart Heart - Left Ventricle 0006566 214 1419 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-0426-SM-3P61G 1 B1 6 pieces, 10x1.3mm 8 Blood Vessel Artery - Aorta 0001496 217 1420 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951539 365172 0.971961 0.973283 0.820949 23355 1 76 0.00327922 282 0 1.02517e+08 0.02761 227380 1.05331e+08 1.38299e+07 23383 5.00037e+07 0 0.151011 0.973283 0.799016 1.02517e+08 0.00465686 2.16216e+07 1.04727e+07 2.17926e+07 269 2.27492e+07 2.0287e+07 0.00395265 2.26688e+07 49.9115 0.00215871 0.995028 0 50.1969 GTEX-POMQ-0526-SM-2QU4T 1 B1 2 pieces, ~10x8 & 7x7mm; bronchopneumonia and alveolar desquamation 8.1 Lung Lung 0008952 222 1416 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-0526-SM-3GADD 1 B1 2 pieces, ~10x8 & 7x7mm; bronchopneumonia and alveolar desquamation 8.1 Lung Lung 0008952 222 1416 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.960493 284024 0.970684 0.964927 0.787618 24703 1 76 0.00277155 146 0 9.05398e+07 0.0288398 270604 9.38306e+07 1.33756e+07 24739 4.493e+07 0 0.183067 0.964927 0.759994 9.05398e+07 0.00944201 1.98871e+07 1.14108e+07 2.01737e+07 183 2.03009e+07 1.54904e+07 0.00609145 2.01548e+07 49.8194 0.00288396 0.969361 0 50.3577 GTEX-POMQ-0626-SM-3P61E 1 B1 6 pieces, ~8x3mm; 5 of the 6 have major muscle fragmentation/tears; 8 Esophagus Esophagus - Muscularis 0004648 231 1408 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950384 308173 0.97333 0.972357 0.831132 23168 1 76 0.00326702 213 0 8.55477e+07 0.0263462 601746 8.79798e+07 1.15076e+07 23188 4.17186e+07 0 0.142198 0.972357 0.808157 8.55477e+07 0.00466897 1.79992e+07 1.01641e+07 1.81267e+07 206 1.88885e+07 1.59418e+07 0.00395215 1.89139e+07 50.0336 0.0068396 0.99433 0 50.1764 GTEX-POMQ-0826-SM-3P61H 1 B1 6 pieces, ~8x2.5mm, mucosa 0.8mm, mild chronic gastritis, well-preserved fundic mucosa 7.4 Stomach Stomach 0000945 227 1418 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950156 311363 0.974869 0.971851 0.809341 24637 1 76 0.0036679 318 0 1.01247e+08 0.0240772 741027 1.0418e+08 1.3674e+07 24671 4.93457e+07 0 0.165528 0.971851 0.78656 1.01247e+08 0.00511316 2.22545e+07 4.09134e+07 2.24975e+07 274 2.34835e+07 1.98144e+07 0.0043744 2.33142e+07 49.8192 0.00711296 0.993547 0 50.2715 GTEX-POMQ-1226-SM-3P61F 1 B1 2 pieces ~8 x 7mm; No endometrium , only myometium 8.4 Uterus Uterus 0000995 265 1384 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952567 319325 0.973429 0.97409 0.819658 23854 1 76 0.00321807 279 0 1.02531e+08 0.0261608 190695 1.05258e+08 1.36014e+07 23881 5.00313e+07 0 0.153771 0.97409 0.798421 1.02531e+08 0.00454534 2.18027e+07 1.0181e+07 2.19479e+07 267 2.28912e+07 2.08819e+07 0.00386704 2.28541e+07 49.9595 0.00181168 0.995613 0 50.166 GTEX-POMQ-1426-SM-3P61D 1 B1 2 pieces, ~8x8 & 13x5mm; a few primordial follicles; probable old endometriosis 7.1 Ovary Ovary 0000992 258 1393 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950423 504573 0.959422 0.972555 0.738665 25030 1 76 0.00332688 167 0 8.95507e+07 0.0402478 109485 9.20778e+07 1.26581e+07 25077 4.36388e+07 0 0.220757 0.972555 0.718393 8.95507e+07 0.00486864 1.90775e+07 1.63295e+07 1.92117e+07 175 2.00717e+07 1.52999e+07 0.00408022 2.00254e+07 49.9423 0.00118905 0.994687 0 50.1752 GTEX-POMQ-1926-SM-3NB1Y 1 B1 2 pieces, ~8x8 & 10x10mm, larger piece has extensive fracture artifact, probable fixation effect 8.2 Muscle Muscle - Skeletal 0011907 313 1354 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.987242 281983 0.980768 0.991304 0.864007 21557 1 76 0.00388589 208 0 1.02449e+08 0.0189723 994248 1.03348e+08 1.75999e+07 21577 5.08816e+07 0 0.116761 0.991304 0.856493 1.02449e+08 0.00580136 2.21742e+07 1.12797e+07 2.2295e+07 226 2.23713e+07 2.11527e+07 0.0048397 2.24823e+07 50.1238 0.00962043 0.995365 0 50.1358 GTEX-POMQ-2026-SM-2QU3S 0 B1 2 pieces, ~1.8x1mm, ~50% fat and blood vessels 7.3 Nerve Nerve - Tibial 0001323 351 1317 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-2026-SM-2S1OD 0 B1 2 pieces, ~1.8x1mm, ~50% fat and blood vessels 7.3 Nerve Nerve - Tibial 0001323 351 1317 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.812266 106033 0.968341 0.814766 0.801618 22787 1 76 0.00459787 125 0 5.86236e+07 0.0313143 165216 7.19515e+07 2.55009e+07 22810 2.89765e+07 0 0.166723 0.814766 0.653132 5.86236e+07 0.0076055 1.26532e+07 6.57554e+06 1.29509e+07 127 1.29795e+07 9.7957e+06 0.00609707 1.27915e+07 49.6351 0.00229622 0.817267 0 50.5814 GTEX-POMQ-2126-SM-2QU4E 0 B1 2 pieces, ~2 x 0.6mm, normal artery 7.8 Blood Vessel Artery - Tibial 0007610 354 1315 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-2126-SM-2S1OJ 0 B1 2 pieces, ~2 x 0.6mm, normal artery 7.8 Blood Vessel Artery - Tibial 0007610 354 1315 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.535739 47730 0.975156 0.539601 0.848327 19169 1 76 0.0046554 108 0 4.06296e+07 0.0244292 199796 7.52956e+07 2.93823e+07 19175 2.00071e+07 0 0.126829 0.539601 0.457759 4.06296e+07 0.00991461 8.51147e+06 3.87533e+06 8.76812e+06 104 8.87086e+06 7.85073e+06 0.00726618 8.66958e+06 49.4262 0.00265349 0.543464 0 50.7426 GTEX-POMQ-2226-SM-2I5FK 0 B1 6 pieces, ~8x3mm. focal dermal hemorrhages 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 362 1308 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.842206 540543 0.960789 0.846275 0.837715 22323 1 76 0.00310008 147 0 8.05438e+07 0.0388976 419773 9.51745e+07 2.0442e+07 22342 3.99329e+07 0 0.123074 0.846275 0.708938 8.05438e+07 0.0107189 1.7281e+07 2.96054e+07 1.77014e+07 157 1.78087e+07 1.53849e+07 0.00689118 1.75327e+07 49.6095 0.00441056 0.850346 0 50.6008 GTEX-POMQ-2226-SM-2M48S 0 B1 6 pieces, ~8x3mm. focal dermal hemorrhages 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 362 1308 BP-19351 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-2326-SM-2QU32 0 B1 2 large pieces, 9x11 and 10x11 mm. Both with large empty central areas of under-fixation. 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 364 1307 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-POMQ-2326-SM-2S1O8 0 B1 2 large pieces, 9x11 and 10x11 mm. Both with large empty central areas of under-fixation. 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 364 1307 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.227814 27860 0.975376 0.229266 0.846084 17940 1 76 0.00474288 106 0 1.57197e+07 0.0242439 81150 6.85652e+07 2.62031e+07 17940 7.70502e+06 0 0.129292 0.229266 0.193978 1.57197e+07 0.00987312 3.39846e+06 2.42363e+06 3.50506e+06 108 3.54211e+06 3.07973e+06 0.00729176 3.45429e+06 49.3724 0.00118355 0.230718 0 50.772 GTEX-POMQ-2326-SM-5S2VS 0 B1 2 large pieces, 9x11 and 10x11 mm. Both with large empty central areas of under-fixation. 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 364 1307 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.991748 312418 0.976753 0.993975 0.85554 22019 1 76 0.00201063 157 0 7.01361e+07 0.022932 350997 7.05612e+07 6.70664e+06 22033 3.49095e+07 0 0.121213 0.993975 0.850386 7.01361e+07 0.00318896 1.54241e+07 9.58507e+06 1.55149e+07 170 1.54906e+07 1.40563e+07 0.00259848 1.56044e+07 50.1829 0.00497437 0.996203 0 50.1467 GTEX-POMQ-2326-SM-DHXIS 0 B1 2 large pieces, 9x11 and 10x11 mm. Both with large empty central areas of under-fixation. 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 364 1307 BP-19350 RNA isolation_PAXgene Tissue miRNA 10/12/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994171 336561 0.979567 0.994992 0.862668 22992 1 76 0.00224659 281 0 9.37477e+07 0.0201055 463483 9.42196e+07 4.65436e+06 23010 4.6735e+07 0 0.116899 0.994992 0.858348 9.37477e+07 0.00273277 2.05672e+07 1.03236e+07 2.09003e+07 266 2.08421e+07 1.98481e+07 0.00248948 2.07056e+07 49.8357 0.00491918 0.995813 0 50.4016 GTEX-POYW-0006-SM-2XCF4 C1 8.1 Blood Whole Blood 0013756 562 BP-19132 RNA isolation_PAXgene Blood RNA (Manual) 09/29/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.428471 106319 0.971702 0.437926 0.778165 19178 1 76 0.00311843 119 0 2.74014e+07 0.0272457 113534 6.25709e+07 9.00832e+06 19181 1.32918e+07 0 0.193537 0.437926 0.340778 2.74014e+07 0.0132098 6.10076e+06 1.90555e+07 6.14283e+06 128 6.41374e+06 5.48805e+06 0.00805518 6.3948e+06 49.9261 0.00181449 0.44738 0 50.1718 GTEX-POYW-0006-SM-2XV6I C1 8.1 Blood Whole Blood 0013756 562 BP-19132 RNA isolation_PAXgene Blood RNA (Manual) 09/29/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-POYW-0008-SM-48TE4 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 669 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.994239 293934 0.98278 0.995685 0.887298 17954 1 76 0.00134856 130 0 5.35102e+07 0.0168849 81366 5.37421e+07 2.64816e+06 17958 2.66611e+07 0 0.0954827 0.995685 0.883469 5.35102e+07 0.0019276 1.20562e+07 5.72552e+06 1.2111e+07 121 1.21537e+07 1.45267e+07 0.00163765 1.20917e+07 49.8723 0.00151401 0.997132 0 50.1134 GTEX-POYW-0426-SM-2XCEV 1 C1 2 pieces ~5x3.5mm pieces, one ~40% fat one edge 6.5 Nerve Nerve - Tibial 0001323 663 1345 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.487635 83149 0.966535 0.490545 0.733933 23226 1 76 0.00258212 138 0 5.70368e+07 0.0330056 197676 1.16272e+08 1.48389e+07 23253 2.81608e+07 0 0.232602 0.490545 0.360027 5.70368e+07 0.0104171 1.2413e+07 6.29892e+06 1.25569e+07 138 1.26748e+07 8.27684e+06 0.00647636 1.26278e+07 49.907 0.00170011 0.493455 0 50.288 GTEX-POYW-0426-SM-2XV4T 1 C1 2 pieces ~5x3.5mm pieces, one ~40% fat one edge 6.5 Nerve Nerve - Tibial 0001323 663 1345 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-POYW-0526-SM-2XCEY 1 C1 2 pieces, ~9x6mm, ~40% intermingled f 7.7 Muscle Muscle - Skeletal 0011907 666 1343 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.971098 157204 0.975495 0.974622 0.805793 22718 1 76 0.00234087 233 0 1.21699e+08 0.0242951 1.68913e+06 1.24867e+08 1.44367e+07 22766 6.04365e+07 0 0.169703 0.974622 0.785344 1.21699e+08 0.00967335 2.66461e+07 1.29373e+07 2.67863e+07 267 2.68918e+07 2.17434e+07 0.00599385 2.69479e+07 50.0521 0.0135274 0.978147 0 50.1311 GTEX-POYW-0526-SM-2XV5Y 1 C1 2 pieces, ~9x6mm, ~40% intermingled f 7.7 Muscle Muscle - Skeletal 0011907 666 1343 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-POYW-0526-SM-5KM2H 1 C1 2 pieces, ~9x6mm, ~40% intermingled f 7.7 Muscle Muscle - Skeletal 0011907 666 1343 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-4820 03/21/2014 TruSeq.v1 EXCLUDE 0.987682 238846 0.976081 0.989878 0.818885 21971 1 76 0.00366946 280 0 1.03424e+08 0.0237078 1.34339e+06 1.04482e+08 4.45372e+06 21999 5.14586e+07 0 0.157196 0.989878 0.810596 1.03424e+08 0.00474827 2.28104e+07 1.19227e+07 2.30044e+07 271 2.30558e+07 2.02808e+07 0.00420767 2.29772e+07 49.9146 0.0128577 0.992074 0 50.2116 GTEX-POYW-0726-SM-2XCEO 1 C1 2 ~ 10x5.5mm pieces, well-fixed. 7 Adipose Tissue Adipose - Subcutaneous 0002190 672 1339 BP-19381 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.935116 160872 0.976556 0.93886 0.802073 24371 1 76 0.00238312 269 0 1.27055e+08 0.0231475 1.25236e+06 1.35329e+08 1.48767e+07 24408 6.3007e+07 0 0.174483 0.93886 0.753034 1.27055e+08 0.00933074 2.81842e+07 1.40789e+07 2.82365e+07 287 2.84041e+07 2.22541e+07 0.00584308 2.84997e+07 50.084 0.0092542 0.942604 0 50.0463 GTEX-POYW-0826-SM-2XCEM 1 C1 2 ~9.5x8mm pieces 6.3 Thyroid Thyroid 0002046 676 1336 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.594612 181591 0.948121 0.598595 0.637688 24301 1 76 0.0030239 123 0 7.27683e+07 0.0515674 184571 1.21565e+08 1.69011e+07 24355 3.5878e+07 0 0.310433 0.598595 0.381717 7.27683e+07 0.0103714 1.55026e+07 1.09327e+07 1.55196e+07 143 1.57576e+07 7.65928e+06 0.00667322 1.57108e+07 49.9257 0.00151829 0.602578 0 50.0274 GTEX-POYW-0826-SM-2XV4Y 1 C1 2 ~9.5x8mm pieces 6.3 Thyroid Thyroid 0002046 676 1336 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-POYW-1126-SM-48TCI 1 C1 6 pieces, ~ 9x1.2mm. 6.2 Blood Vessel Artery - Aorta 0001496 683 1333 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989216 207689 0.971558 0.991156 0.751109 21929 1 76 0.00204878 119 0 6.23066e+07 0.0281217 95124 6.28626e+07 3.37843e+06 21950 3.09807e+07 0 0.220449 0.991156 0.744466 6.23066e+07 0.00269596 1.3559e+07 5.31175e+06 1.3626e+07 136 1.36525e+07 1.04277e+07 0.00237174 1.36535e+07 50.0017 0.00151321 0.993097 0 50.1233 GTEX-POYW-1226-SM-2XCEP 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) 6.6 Lung Lung 0008952 687 1330 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.798081 161921 0.968686 0.800539 0.746344 23896 1 76 0.00255863 200 0 1.07964e+08 0.0309262 656674 1.34864e+08 1.46586e+07 23939 5.35352e+07 0 0.222343 0.800539 0.597477 1.07964e+08 0.00971298 2.36233e+07 1.02806e+07 2.37807e+07 235 2.37974e+07 1.52341e+07 0.00612482 2.39213e+07 50.1298 0.00486916 0.802998 0 50.166 GTEX-POYW-1226-SM-2XK2C 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R03C02 GTEX-POYW-1226-SM-2XV5C 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) 6.6 Lung Lung 0008952 687 1330 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-POYW-1226-SM-325A1 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003078_R01C01 GTEX-POYW-1226-SM-325HG 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R03C02 GTEX-POYW-1226-SM-4SVQN 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-POYW-1226-SM-5JK3K 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-POYW-1226-SM-5LU5O 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) 6.6 Lung Lung 0008952 687 1330 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-4824 03/23/2014 TruSeq.v1 EXCLUDE 0.991296 230954 0.970092 0.993116 0.764707 24201 1 76 0.00392011 157 0 8.27774e+07 0.0295935 519453 8.33512e+07 8.92736e+06 24235 4.11909e+07 0 0.205385 0.993116 0.759442 8.27774e+07 0.00381658 1.82621e+07 1.04248e+07 1.82787e+07 179 1.82657e+07 1.30184e+07 0.00386844 1.84274e+07 50.2204 0.0062321 0.994935 0 50.0227 GTEX-POYW-1226-SM-5LZWQ 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) 6.6 Lung Lung 0008952 687 1330 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-4900 03/23/2014 TruSeq.v1 EXCLUDE 0.989349 291385 0.97013 0.99049 0.770074 23839 1 76 0.00270042 139 0 7.3938e+07 0.0295531 435348 7.46479e+07 3.42486e+06 23867 3.67832e+07 0 0.200056 0.99049 0.762751 7.3938e+07 0.00343733 1.62929e+07 9.69928e+06 1.63892e+07 164 1.6384e+07 1.19998e+07 0.00306845 1.63857e+07 50.0026 0.00583202 0.991631 0 50.1473 GTEX-POYW-1226-SM-CLTGA 2 C1 2 pieces, ~ 9.5x7.5mm -at least one aliquot appears peripheral (contains fat) Lung Lung 0008952 687 1330 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 07/27/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-POYW-1326-SM-48TCG 1 C1 6 pieces, , ~5-7x1.5mm. Squamous mucosa is ~30% of thicknes14 5.9 Esophagus Esophagus - Mucosa 0006920 688 1331 BP-19380 RNA isolation_PAXgene Tissue miRNA 10/13/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.985255 160085 0.971786 0.986702 0.831537 20530 1 76 0.00195821 151 0 6.38996e+07 0.0279781 786976 6.47608e+07 3.57723e+06 20541 3.18309e+07 0 0.140249 0.986702 0.820479 6.38996e+07 0.00258194 1.41419e+07 7.80014e+06 1.42373e+07 178 1.42237e+07 8.49854e+06 0.00226962 1.42442e+07 50.036 0.012152 0.98815 0 50.1681 GTEX-PSDG-0004-SM-2IJGH C1 Blood Whole Blood 0013756 238 BP-19190 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101016_R04C01 GTEX-PSDG-0004-SM-2XK1T C1 Blood Whole Blood 0013756 238 BP-19190 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R02C02 GTEX-PSDG-0004-SM-3USRY C1 Blood Whole Blood 0013756 238 BP-19190 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-PSDG-0004-SM-5JK3L C1 Blood Whole Blood 0013756 238 BP-19190 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/03/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PSDG-0005-SM-2M481 C1 8 Blood Whole Blood 0013756 238 BP-19187 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0005-SM-3GADC C1 8 Blood Whole Blood 0013756 238 BP-19187 RNA isolation_PAXgene Blood RNA (Manual) 10/03/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.948622 449661 0.970613 0.953938 0.78611 20455 1 76 0.0027686 131 0 8.56118e+07 0.028871 329675 8.97456e+07 1.32645e+07 20469 4.24372e+07 0 0.184503 0.953938 0.749901 8.56118e+07 0.0104344 1.8864e+07 3.5411e+07 1.91816e+07 157 1.93474e+07 1.63752e+07 0.00658012 1.91599e+07 49.7565 0.00367344 0.959255 0 50.4175 GTEX-PSDG-0008-SM-48TE5 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 412 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993525 391978 0.98269 0.995108 0.885283 18975 1 76 0.0013601 149 0 6.72129e+07 0.0169959 117149 6.75433e+07 3.62714e+06 18980 3.3487e+07 0 0.0974073 0.995108 0.880952 6.72129e+07 0.00192098 1.50777e+07 6.86832e+06 1.51544e+07 152 1.52127e+07 1.7967e+07 0.0016401 1.51275e+07 49.8597 0.00173443 0.996691 0 50.1268 GTEX-PSDG-0226-SM-2I5FR 0 C1 6 pieces, ~8x2.5mm; good appendages 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 411 1337 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.188565 67418 0.969957 0.208594 0.808863 21648 1 76 0.00428118 145 0 4.91942e+07 0.0293136 346111 2.35837e+08 9.46338e+07 21660 2.20376e+07 0 0.161094 0.208594 0.168724 4.91942e+07 0.0971364 9.51966e+06 8.78951e+06 9.82609e+06 112 1.18895e+07 8.06618e+06 0.0462509 1.1622e+07 49.4312 0.00146758 0.228623 0 50.792 GTEX-PSDG-0226-SM-2M48X 0 C1 6 pieces, ~8x2.5mm; good appendages 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 411 1337 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0226-SM-33HC1 0 C1 6 pieces, ~8x2.5mm; good appendages 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 411 1337 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.581727 157489 0.972867 0.583887 0.810309 23150 1 76 0.0022093 240 0 8.77602e+07 0.0267238 548964 1.50303e+08 1.68125e+07 23188 4.33751e+07 0 0.162558 0.583887 0.473129 8.77602e+07 0.00661499 1.89273e+07 9.55466e+06 1.91799e+07 212 1.9254e+07 1.45999e+07 0.004404 1.9172e+07 49.8933 0.00365237 0.586047 0 50.3314 GTEX-PSDG-0226-SM-DKPOZ 0 C1 6 pieces, ~8x2.5mm; good appendages 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 411 1337 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991504 383415 0.973069 0.993675 0.828022 22851 1 76 0.00275056 256 0 9.11346e+07 0.0266431 496706 9.17146e+07 9.78577e+06 22885 4.538e+07 0 0.145047 0.993675 0.822785 9.11346e+07 0.00322836 1.97802e+07 1.21398e+07 1.99643e+07 236 1.99864e+07 1.67517e+07 0.00298894 1.99446e+07 49.9476 0.00541578 0.995846 0 50.2315 GTEX-PSDG-0326-SM-48TCP 1 C1 2 pieces, 9x7 and 9x6 mm. 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 415 1334 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991875 189636 0.976211 0.993288 0.809453 22590 1 76 0.00173787 165 0 6.83507e+07 0.0235016 458138 6.88126e+07 3.60471e+06 22614 3.40465e+07 0 0.166759 0.993288 0.80402 6.83507e+07 0.00234169 1.5155e+07 6.75138e+06 1.52048e+07 176 1.5221e+07 1.11752e+07 0.00203935 1.52323e+07 50.0185 0.00665776 0.994701 0 50.0819 GTEX-PSDG-0426-SM-2QU46 1 C1 2 pieces, ~7x7 & 9x5 mm, about 60% and 25% fat and stroma 7.6 Muscle Muscle - Skeletal 0011907 464 1287 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0426-SM-2S1OF 1 C1 2 pieces, ~7x7 & 9x5 mm, about 60% and 25% fat and stroma 7.6 Muscle Muscle - Skeletal 0011907 464 1287 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.26513 22601 0.976358 0.263895 0.858847 15825 1 76 0.0042291 105 0 1.62546e+07 0.0234386 158327 6.15948e+07 2.31382e+07 15825 7.94562e+06 0 0.117511 0.263895 0.226645 1.62546e+07 0.00867717 3.51075e+06 2.57002e+06 3.63538e+06 106 3.59501e+06 3.02714e+06 0.00646354 3.4792e+06 49.1814 0.00257046 0.26266 0 50.872 GTEX-PSDG-0426-SM-5SI86 1 C1 2 pieces, ~7x7 & 9x5 mm, about 60% and 25% fat and stroma 7.6 Muscle Muscle - Skeletal 0011907 464 1287 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988648 277366 0.980701 0.992451 0.864786 20312 1 76 0.00176557 279 0 8.27023e+07 0.0190873 889581 8.33314e+07 8.99472e+06 20326 4.1121e+07 0 0.115915 0.992451 0.858257 8.27023e+07 0.00294261 1.80374e+07 1.31085e+07 1.80951e+07 258 1.81478e+07 1.57728e+07 0.00235184 1.82668e+07 50.1634 0.0106752 0.996255 0 50.0799 GTEX-PSDG-0526-SM-2QU4G 1 C1 2 pieces, ~2.5 mm diameter 7.6 Blood Vessel Artery - Tibial 0007610 469 1283 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0526-SM-2S1OH 1 C1 2 pieces, ~2.5 mm diameter 7.6 Blood Vessel Artery - Tibial 0007610 469 1283 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.79559 59679 0.972586 0.799849 0.816432 20167 1 76 0.00443008 110 0 4.89324e+07 0.027041 144378 6.1177e+07 2.16451e+07 20183 2.41708e+07 0 0.156154 0.799849 0.653022 4.89324e+07 0.00914521 1.04125e+07 4.81143e+06 1.06998e+07 106 1.07865e+07 8.91542e+06 0.00677509 1.05635e+07 49.4776 0.00236 0.804107 0 50.6805 GTEX-PSDG-0626-SM-2QU42 1 C1 2 pieces, ~6x3 mm, <2% fat 7.3 Nerve Nerve - Tibial 0001323 470 1283 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0626-SM-2S1OE 1 C1 2 pieces, ~6x3 mm, <2% fat 7.3 Nerve Nerve - Tibial 0001323 470 1283 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.498417 54127 0.968739 0.501447 0.762892 21385 1 76 0.0045052 106 0 3.36957e+07 0.0310086 58873 6.71969e+07 2.48199e+07 21401 1.65916e+07 0 0.205847 0.501447 0.38255 3.36957e+07 0.00971762 7.31352e+06 4.31302e+06 7.4681e+06 101 7.54544e+06 5.56032e+06 0.00709567 7.42453e+06 49.5962 0.000876127 0.504476 0 50.5229 GTEX-PSDG-0726-SM-2I5FN 1 C1 2 pieces, 9x6 & 8x5mm; 6.7 Thyroid Thyroid 0002046 490 1265 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 EXCLUDE 0.48045 187881 0.957287 0.487694 0.703635 25737 1 76 0.0040151 114 0 8.39769e+07 0.0420399 500354 1.72192e+08 5.33991e+07 25790 4.11509e+07 0 0.253652 0.487694 0.343159 8.39769e+07 0.0285913 1.79146e+07 1.36921e+07 1.81443e+07 127 1.86791e+07 1.09887e+07 0.0161207 1.85374e+07 49.8096 0.00290579 0.494939 0 50.3186 GTEX-PSDG-0726-SM-2M48T 1 C1 2 pieces, 9x6 & 8x5mm; 6.7 Thyroid Thyroid 0002046 490 1265 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-0826-SM-48TCZ 1 C1 2 pieces, ~2.7mm diameter ; ~20% adipose tissue around one and 5% around the other; eccentric intimal fibrosis 7 Blood Vessel Artery - Coronary 0001621 493 1262 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990492 324182 0.96849 0.991884 0.799023 22659 1 76 0.00180752 165 0 7.68571e+07 0.0312393 206298 7.74859e+07 3.87018e+06 22681 3.82634e+07 0 0.169467 0.991884 0.792538 7.68571e+07 0.00251246 1.65834e+07 6.89478e+06 1.66625e+07 186 1.66658e+07 1.34061e+07 0.00215949 1.66882e+07 50.0336 0.00266239 0.993276 0 50.1189 GTEX-PSDG-0926-SM-2I5FP 1 C1 2 pieces, ~10.5x6 mm; <5% fat; small foci of fibrosis 7.1 Heart Heart - Left Ventricle 0006566 495 1261 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.835358 120992 0.980566 0.841642 0.839885 21627 1 76 0.00283309 195 0 8.58735e+07 0.019264 2.77833e+06 1.02031e+08 2.02816e+07 21647 4.24842e+07 0 0.140681 0.841642 0.706883 8.58735e+07 0.0106128 1.87404e+07 1.71434e+07 1.9181e+07 229 1.92099e+07 1.07932e+07 0.00669392 1.91575e+07 49.9316 0.0272303 0.847926 0 50.5809 GTEX-PSDG-0926-SM-2M48V 1 C1 2 pieces, ~10.5x6 mm; <5% fat; small foci of fibrosis 7.1 Heart Heart - Left Ventricle 0006566 495 1261 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-1026-SM-48TCV 1 C1 6 pieces, 10x1.5mm 7.7 Blood Vessel Artery - Aorta 0001496 498 1259 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991219 249669 0.971383 0.99291 0.791418 22109 1 76 0.00184606 132 0 6.10064e+07 0.0282211 129918 6.14421e+07 3.21156e+06 22129 3.03639e+07 0 0.179965 0.99291 0.785806 6.10064e+07 0.00253274 1.32301e+07 5.10901e+06 1.32769e+07 142 1.33072e+07 1.06842e+07 0.00218881 1.33016e+07 49.9894 0.00211448 0.9946 0 50.0882 GTEX-PSDG-1126-SM-2QU4R 1 C1 2 pieces, ~10x7 mm; patchy bronchopneumonia, 'heart failure' cells, prominent arteries 7.4 Lung Lung 0008952 500 1258 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PSDG-1126-SM-2S1ON 1 C1 2 pieces, ~10x7 mm; patchy bronchopneumonia, 'heart failure' cells, prominent arteries 7.4 Lung Lung 0008952 500 1258 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.45087 86212 0.966447 0.453676 0.748218 20689 1 76 0.00475062 96 0 3.22885e+07 0.0332369 165483 7.11708e+07 2.41703e+07 20704 1.58935e+07 0 0.218229 0.453676 0.339449 3.22885e+07 0.00967247 7.00598e+06 5.93011e+06 7.20538e+06 103 7.26828e+06 4.65458e+06 0.00719632 7.12827e+06 49.5137 0.00232515 0.456482 0 50.7015 GTEX-PSDG-1326-SM-48TD2 1 C1 6 pieces, ~8x1.3 mm; mucosa=~0.25mm thick. Well preserved mucosa 8.7 Esophagus Esophagus - Mucosa 0006920 504 1258 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992064 292280 0.971071 0.993639 0.759268 23079 1 76 0.00180407 131 0 6.63815e+07 0.028656 171538 6.68065e+07 3.58278e+06 23106 3.30574e+07 0 0.211803 0.993639 0.754438 6.63815e+07 0.00238882 1.48562e+07 7.77239e+06 1.49077e+07 144 1.49517e+07 1.16285e+07 0.00209598 1.49152e+07 49.939 0.00256769 0.995213 0 50.0865 GTEX-PSDG-1426-SM-48TD1 1 C1 6 pieces, ~7x3.5 mm; 4 aliquots contain prominent submucosal glands and dilated ducts; ganglion cells well preserved 7.5 Esophagus Esophagus - Muscularis 0004648 506 1257 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.9912 263250 0.971001 0.9929 0.794128 22844 1 76 0.00178755 140 0 6.6976e+07 0.0287316 358948 6.7455e+07 3.52806e+06 22869 3.33293e+07 0 0.176872 0.9929 0.78849 6.6976e+07 0.00241279 1.45358e+07 5.92739e+06 1.46021e+07 161 1.46257e+07 1.10305e+07 0.00209964 1.46231e+07 49.9956 0.0053213 0.994599 0 50.1138 GTEX-PSDG-1526-SM-48TCY 1 C1 2 pieces ~10x8 mm 6.1 Pancreas Pancreas 0001150 509 1255 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99127 233513 0.976604 0.992894 0.799997 21065 1 76 0.00201581 100 0 6.03964e+07 0.0232454 109868 6.08286e+07 3.12998e+06 21080 3.00725e+07 0 0.176607 0.992894 0.794312 6.03964e+07 0.00268444 1.37774e+07 1.22622e+07 1.38986e+07 109 1.39091e+07 1.49755e+07 0.00234958 1.38661e+07 49.9225 0.00180619 0.994518 0 50.2189 GTEX-PSDG-1626-SM-48TCQ 1 C1 2 ~8x8 mm adipose pieces with <1% mammary tissue; 1, 3.2x2.3 mm folded fibrous piece with a few mammary ducts 6.3 Breast Breast - Mammary Tissue 0008367 511 1255 BP-19411 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989831 219510 0.974915 0.992415 0.830253 21123 1 76 0.00171969 135 0 6.08281e+07 0.0248206 706862 6.1293e+07 3.38774e+06 21139 3.02641e+07 0 0.144662 0.992415 0.823956 6.08281e+07 0.00238922 1.33897e+07 6.45389e+06 1.34939e+07 158 1.35286e+07 9.75263e+06 0.00205359 1.35033e+07 49.9532 0.0115325 0.995 0 50.1937 GTEX-PSDG-1826-SM-EAZ2S 3 C1 6 pieces, ~10x2.5mm, poorly preserved mucosa 5.5 Colon Colon - Transverse 0001157 516 1252 BP-19412 RNA isolation_PAXgene Tissue miRNA 10/17/2011 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.988956 369595 0.97171 0.989881 0.788251 24241 1 76 0.00207615 195 0 7.81532e+07 0.0280289 673272 7.89521e+07 6.89533e+06 24274 3.89345e+07 0 0.183459 0.989881 0.780275 7.81532e+07 0.00286161 1.7109e+07 7.45182e+06 1.7336e+07 206 1.72674e+07 1.06922e+07 0.00246851 1.72437e+07 49.9656 0.0085276 0.990807 0 50.3296 GTEX-PVOW-0006-SM-2XV5H C1 6.8 Blood Whole Blood 0013756 506 BP-19375 RNA isolation_PAXgene Blood RNA (Manual) 10/13/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0006-SM-3NMB8 C1 6.8 Blood Whole Blood 0013756 506 BP-19375 RNA isolation_PAXgene Blood RNA (Manual) 10/13/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.930681 740548 0.975472 0.933518 0.79495 18996 1 76 0.00347153 109 0 1.04793e+08 0.0229143 265835 1.12256e+08 1.41049e+07 19005 5.19739e+07 0 0.180522 0.933518 0.7421 1.04793e+08 0.00548259 2.44548e+07 2.18112e+08 2.46607e+07 144 2.47573e+07 2.97337e+07 0.00447401 2.46798e+07 49.9217 0.00236811 0.936354 0 50.2096 GTEX-PVOW-0008-SM-48TE8 C1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 635 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993212 369799 0.977308 0.994687 0.867532 19883 1 76 0.00150017 143 0 6.37468e+07 0.0222964 159591 6.40873e+07 3.30587e+06 19891 3.17581e+07 0 0.109776 0.994687 0.862923 6.37468e+07 0.00207055 1.42635e+07 5.61839e+06 1.43603e+07 156 1.44211e+07 1.39003e+07 0.00178494 1.42909e+07 49.7733 0.00249021 0.996162 0 50.169 GTEX-PVOW-0011-R10A-SM-EXOHB C1, A1 5.5 Brain Brain - Frontal Cortex (BA9) 0009834 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.990272 521840 0.965982 0.992164 0.866136 24161 1 76 0.00185723 274 0 1.09421e+08 0.0334827 3.49952e+06 1.10286e+08 6.21061e+06 24180 5.44648e+07 0 0.0998457 0.992164 0.85935 1.09421e+08 0.00295554 2.39959e+07 1.18047e+07 2.42268e+07 329 2.41839e+07 1.55585e+07 0.00240534 2.42138e+07 50.0309 0.0317314 0.994056 0 50.2394 GTEX-PVOW-0011-R10a-SM-AHZMA C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 517 ChIP-Seq GTEX-PVOW-0011-R1A-SM-2XV5W C1, A1 6.7 Brain Brain - Hippocampus 0001954 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0011-R1A-SM-32PL6 C1, A1 6.7 Brain Brain - Hippocampus 0001954 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.442232 123234 0.966575 0.443881 0.856388 22377 1 76 0.00223819 147 0 5.92312e+07 0.0328516 2.93774e+06 1.33439e+08 1.61826e+07 22398 2.92667e+07 0 0.110188 0.443881 0.380135 5.92312e+07 0.00721555 1.3072e+07 6.26179e+06 1.3221e+07 183 1.31818e+07 6.67990e+06 0.00471763 1.33164e+07 50.2538 0.0220155 0.445531 0 50.2834 GTEX-PVOW-0011-R3A-SM-2XV66 C1, A1 7.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0011-R3A-SM-32PKX C1, A1 7.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.966459 245223 0.965679 0.970067 0.847542 25930 1 76 0.00221005 519 0 1.45725e+08 0.0337341 4.66533e+06 1.50221e+08 1.43944e+07 25970 7.23289e+07 0 0.118136 0.970067 0.822173 1.45725e+08 0.0069023 3.21367e+07 1.14013e+07 3.21372e+07 545 3.213e+07 1.93338e+07 0.00454745 3.26322e+07 50.3877 0.0310564 0.973676 0 50.0003 GTEX-PVOW-0011-R5A-SM-2XV6T C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0011-R5A-SM-32PL7 C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 517 BP-19400 RNA isolation_PAXgene Tissue miRNA 10/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.975889 321626 0.96356 0.979197 0.823198 26443 1 76 0.00220231 518 0 1.53371e+08 0.036049 7.33865e+06 1.56629e+08 1.54165e+07 26491 7.6171e+07 0 0.140362 0.979197 0.806073 1.53371e+08 0.00651081 3.35771e+07 1.57563e+07 3.392e+07 535 3.38109e+07 1.7076e+07 0.00434928 3.4139e+07 50.2414 0.0468537 0.982506 0 50.254 GTEX-PVOW-0126-SM-2XCFA 1 C1 6 pieces~8.5x2.5mm; many sweat and sebaceous glands; tissue tears 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 634 832 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.975617 205501 0.975352 0.978905 0.751748 25680 1 76 0.00241019 361 0 1.43045e+08 0.0242823 865786 1.46127e+08 1.62038e+07 25769 7.10044e+07 0 0.223604 0.978905 0.735891 1.43045e+08 0.00941598 3.11058e+07 1.46594e+07 3.1199e+07 332 3.13333e+07 2.15645e+07 0.00590132 3.14172e+07 50.0668 0.00592488 0.982194 0 50.0748 GTEX-PVOW-0126-SM-2XV68 1 C1 6 pieces~8.5x2.5mm; many sweat and sebaceous glands; tissue tears 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 634 832 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0426-SM-2XCF8 1 C1 2 pieces ~8mm. foci of patchy fibrosis c/w infarcts 6.9 Heart Heart - Left Ventricle 0006566 651 812 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 EXCLUDE 0.451634 56328 0.977144 0.458707 0.83893 21382 1 76 0.00237555 112 0 4.96582e+07 0.0226639 3.08292e+06 1.08257e+08 1.68966e+07 21390 2.42788e+07 0 0.138214 0.458707 0.384824 4.96582e+07 0.0113649 1.09085e+07 5.53339e+06 1.11385e+07 145 1.14198e+07 4.18367e+06 0.00680089 1.13117e+07 49.7624 0.0284778 0.465781 0 50.5217 GTEX-PVOW-0426-SM-2XV5E 1 C1 2 pieces ~8mm. foci of patchy fibrosis c/w infarcts 6.9 Heart Heart - Left Ventricle 0006566 651 812 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0426-SM-5MR5R 1 C1 2 pieces ~8mm. foci of patchy fibrosis c/w infarcts 6.9 Heart Heart - Left Ventricle 0006566 651 812 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-4902 03/22/2014 TruSeq.v1 RNASEQ 0.989999 289890 0.979847 0.990556 0.810304 22065 1 76 0.00242853 369 0 1.10145e+08 0.0200287 7.14139e+06 1.11196e+08 4.15558e+06 22088 5.49123e+07 0 0.169543 0.990556 0.802652 1.10145e+08 0.00251204 2.41331e+07 4.21881e+07 2.43472e+07 354 2.42822e+07 9.95227e+06 0.00247026 2.42816e+07 49.9994 0.0642237 0.991114 0 50.2208 GTEX-PVOW-0426-SM-5N9DW 1 C1 2 pieces ~8mm. foci of patchy fibrosis c/w infarcts 6.9 Heart Heart - Left Ventricle 0006566 651 812 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-4904 03/22/2014 TruSeq.v1 EXCLUDE 0.992872 243909 0.976574 0.993727 0.816449 21770 1 76 0.00251079 264 0 8.44716e+07 0.023296 5.19766e+06 8.50048e+07 3.89685e+06 21789 4.20882e+07 0 0.160125 0.993727 0.811328 8.44716e+07 0.00302907 1.86744e+07 2.27204e+07 1.86977e+07 324 1.86632e+07 8.15671e+06 0.00276971 1.87765e+07 50.1513 0.0611454 0.994583 0 50.0312 GTEX-PVOW-0626-SM-2XCF6 1 C1 2 pieces,~4x2mm;4.5x3.5mm; ~30% fat on outside of each piece 6.1 Nerve Nerve - Tibial 0001323 666 800 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.815217 407478 0.954458 0.817689 0.683136 25806 1 76 0.00253509 223 0 1.22327e+08 0.0451711 431487 1.496e+08 1.66354e+07 25870 6.06691e+07 0 0.271322 0.817689 0.558593 1.22327e+08 0.00958059 2.64581e+07 1.87585e+07 2.66681e+07 245 2.67105e+07 1.5527e+07 0.00604719 2.6767e+07 50.0529 0.00288426 0.820161 0 50.1976 GTEX-PVOW-0626-SM-2XV4R 1 C1 2 pieces,~4x2mm;4.5x3.5mm; ~30% fat on outside of each piece 6.1 Nerve Nerve - Tibial 0001323 666 800 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-0726-SM-2XCF5 0 C1 2 pieces, ~2x1.3 mm. Minimal intimal sclerosis; no adherent fat (good dissection); focal tissue tears (probably not due to fixation) 8.7 Blood Vessel Artery - Tibial 0007610 667 800 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.96644 139739 0.972667 0.969292 0.803917 22940 1 76 0.00235297 217 0 1.14238e+08 0.0269071 456588 1.17857e+08 1.35523e+07 22972 5.66993e+07 0 0.168749 0.969292 0.779231 1.14238e+08 0.00940719 2.44916e+07 7.52553e+06 2.45697e+07 252 2.46524e+07 1.95739e+07 0.0058697 2.47141e+07 50.0625 0.00387407 0.972144 0 50.0797 GTEX-PVOW-0726-SM-2XV5G 0 C1 2 pieces, ~2x1.3 mm. Minimal intimal sclerosis; no adherent fat (good dissection); focal tissue tears (probably not due to fixation) 8.7 Blood Vessel Artery - Tibial 0007610 667 800 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-1026-SM-2XCF9 2 C1 2 pieces,~7x4mm; congested 6.4 Lung Lung 0008952 700 770 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.927388 168446 0.970272 0.930833 0.725625 25682 1 76 0.00266599 208 0 1.12913e+08 0.0293932 677309 1.21303e+08 1.59854e+07 25755 5.60014e+07 0 0.244647 0.930833 0.675435 1.12913e+08 0.00974419 2.4886e+07 1.03539e+07 2.49611e+07 244 2.50727e+07 1.4387e+07 0.00619199 2.51687e+07 50.0956 0.0055836 0.934278 0 50.0754 GTEX-PVOW-1026-SM-2XV5D 2 C1 2 pieces,~7x4mm; congested 6.4 Lung Lung 0008952 700 770 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-1026-SM-325A8 2 C1 2 pieces,~7x4mm; congested Lung Lung 0008952 700 770 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003067_R04C01 GTEX-PVOW-1026-SM-325HO 2 C1 2 pieces,~7x4mm; congested Lung Lung 0008952 700 770 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R04C01 GTEX-PVOW-1026-SM-4SVQZ 2 C1 2 pieces,~7x4mm; congested Lung Lung 0008952 700 770 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PVOW-1026-SM-5JK3V 2 C1 2 pieces,~7x4mm; congested Lung Lung 0008952 700 770 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-PVOW-1026-SM-5NQ7M 2 C1 2 pieces,~7x4mm; congested 6.4 Lung Lung 0008952 700 770 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-4906 03/22/2014 TruSeq.v1 EXCLUDE 0.990226 231210 0.970876 0.991659 0.744111 24001 1 76 0.00231519 137 0 6.79867e+07 0.0288073 385153 6.85586e+07 5.58057e+06 24027 3.38254e+07 0 0.226765 0.991659 0.737904 6.79867e+07 0.00317191 1.50244e+07 7.6531e+06 1.50989e+07 156 1.50601e+07 9.6183e+06 0.00274293 1.51615e+07 50.1677 0.00561787 0.993092 0 50.1236 GTEX-PVOW-1026-SM-5O9B9 2 C1 2 pieces,~7x4mm; congested 6.4 Lung Lung 0008952 700 770 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-4909 03/20/2014 TruSeq.v1 EXCLUDE 0.98797 331838 0.971487 0.990832 0.7491 25102 1 76 0.00241468 207 0 9.42393e+07 0.0281785 607668 9.51112e+07 1.138e+07 25136 4.68225e+07 0 0.222387 0.990832 0.742233 9.42393e+07 0.00387105 2.07324e+07 1.05579e+07 2.09943e+07 231 2.09893e+07 1.33922e+07 0.00314076 2.10042e+07 50.0177 0.00638903 0.993695 0 50.3138 GTEX-PVOW-1026-SM-CLTG9 2 C1 2 pieces,~7x4mm; congested Lung Lung 0008952 700 770 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-PVOW-1426-SM-EZ6LO 1 C1 6 pieces, ~9x1.5mm; focal plaques 5.8 Blood Vessel Artery - Aorta 0001496 710 764 BP-19441 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.984412 215603 0.966621 0.985918 0.738406 23476 1 76 0.00276407 161 0 8.40825e+07 0.0330432 270107 8.52834e+07 6.67908e+06 23507 4.18612e+07 0 0.228215 0.985918 0.728008 8.40825e+07 0.00393549 1.81175e+07 7.38277e+06 1.81396e+07 198 1.81248e+07 1.24059e+07 0.00334889 1.82533e+07 50.1766 0.00316717 0.987424 0 50.0305 GTEX-PVOW-1626-SM-48TC9 1 C1 6 pieces,~6x1.2mm; epithelium 0.3mm 7.2 Esophagus Esophagus - Mucosa 0006920 719 757 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990135 194225 0.976578 0.991984 0.777346 21582 1 76 0.00184167 129 0 6.33754e+07 0.0232078 586807 6.38875e+07 3.21109e+06 21599 3.15481e+07 0 0.199232 0.991984 0.771115 6.33754e+07 0.00247835 1.43435e+07 7.11001e+06 1.44104e+07 151 1.44388e+07 9.68585e+06 0.00215942 1.44301e+07 49.9851 0.00918501 0.993833 0 50.1162 GTEX-PVOW-2126-SM-EZ6LN 2 C1 2 piececs,~8x6mm; spermatogenesis 5.8 Testis Testis 0000473 732 748 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990323 277314 0.920096 0.991793 0.723155 33249 1 76 0.00246784 150 0 7.51249e+07 0.0795674 705639 7.57465e+07 5.63739e+06 33305 3.74385e+07 0 0.196941 0.991793 0.71722 7.51249e+07 0.00348285 1.53185e+07 1.25275e+07 1.54061e+07 157 1.54375e+07 1.18754e+07 0.00297459 1.53839e+07 49.9131 0.00931579 0.993264 0 50.1427 GTEX-PVOW-2526-SM-2XCF7 2 C1 4 pieces,~5-6x3mm; tissue tears 7.1 Brain Brain - Cortex 0001870 755 729 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.964631 307886 0.962633 0.967897 0.836383 25438 1 76 0.00225096 518 0 1.28388e+08 0.0369057 3.86179e+06 1.32646e+08 1.39587e+07 25466 6.37431e+07 0 0.12625 0.967897 0.809533 1.28388e+08 0.00924997 2.81481e+07 1.59237e+07 2.83288e+07 471 2.83526e+07 1.56245e+07 0.00573866 2.84905e+07 50.1212 0.0291134 0.971163 0 50.1599 GTEX-PVOW-2526-SM-2XV6F 2 C1 4 pieces,~5-6x3mm; tissue tears 7.1 Brain Brain - Cortex 0001870 755 729 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-2526-SM-CYKP7 2 C1 4 pieces,~5-6x3mm; tissue tears 7.1 Brain Brain - Cortex 0001870 755 729 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 RIP-Seq GTEX-PVOW-2626-SM-2XV6W 1 C1 4 pieces, ~6x3 mm; moderate tissue tears 7.1 Brain Brain - Cerebellum 0002037 758 727 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-PVOW-2626-SM-32PL8 1 C1 4 pieces, ~6x3 mm; moderate tissue tears 7.1 Brain Brain - Cerebellum 0002037 758 727 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.958783 523874 0.946774 0.961886 0.713487 25469 1 76 0.0024204 347 0 1.28287e+08 0.0528365 1.57626e+06 1.3337e+08 1.09841e+07 25528 6.36544e+07 0 0.233288 0.961886 0.686293 1.28287e+08 0.00664343 2.75928e+07 1.60702e+07 2.77753e+07 340 2.78232e+07 1.51968e+07 0.0045251 2.7918e+07 50.0851 0.0118187 0.96499 0 50.1648 GTEX-PVOW-2726-SM-48TCA 2 C1 1 piece, 6x5.6 mm 6.4 Pituitary Pituitary 0000007 762 724 BP-19443 RNA isolation_PAXgene Tissue miRNA 10/18/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989623 476889 0.953317 0.991772 0.787362 24725 1 76 0.001814 164 0 7.47689e+07 0.0464503 232957 7.53892e+07 3.94002e+06 24756 3.72001e+07 0 0.165956 0.991772 0.780883 7.47689e+07 0.00259177 1.59469e+07 1.46317e+07 1.60772e+07 190 1.61139e+07 1.14473e+07 0.00220204 1.60733e+07 49.937 0.00309006 0.99392 0 50.2034 GTEX-PW2O-0004-SM-2IJGJ B1 Blood Whole Blood 0013756 -126 BP-19372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410051_R01C01 GTEX-PW2O-0004-SM-2XK1V B1 Blood Whole Blood 0013756 -126 BP-19372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R06C02 GTEX-PW2O-0004-SM-4X61N B1 Blood Whole Blood 0013756 -126 BP-19372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PW2O-0004-SM-5JK3M B1 Blood Whole Blood 0013756 -126 BP-19372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/13/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PW2O-0006-SM-2I3DV B1 7.4 Blood Whole Blood 0013756 -126 BP-19375 RNA isolation_PAXgene Blood RNA (Manual) 10/13/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.85329 619030 0.964159 0.856431 0.804998 17535 1 76 0.00235594 93 0 8.09424e+07 0.0348808 332020 9.45113e+07 1.16116e+07 17540 4.01787e+07 0 0.159161 0.856431 0.689426 8.09424e+07 0.00412863 1.86044e+07 1.53355e+08 1.91196e+07 129 1.92435e+07 2.27114e+07 0.00323904 1.87857e+07 49.3982 0.00351302 0.859573 0 50.6829 GTEX-PW2O-0006-SM-2IZHL B1 7.4 Blood Whole Blood 0013756 -126 BP-19375 RNA isolation_PAXgene Blood RNA (Manual) 10/13/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-0008-SM-48TEB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 274 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.993699 498152 0.976765 0.995141 0.872146 19913 1 76 0.00139375 148 0 7.14066e+07 0.0229148 356397 7.17553e+07 3.48063e+06 19925 3.55767e+07 0 0.104619 0.995141 0.867908 7.14066e+07 0.00199301 1.57832e+07 9.3933e+06 1.59049e+07 163 1.59306e+07 1.7669e+07 0.00169294 1.58642e+07 49.8956 0.00496684 0.996584 0 50.1921 GTEX-PW2O-0126-SM-48TC8 2 B1 2 ~9x7.5mm aliquots 7.8 Spleen Spleen 0002106 115 1448 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.987264 272206 0.962015 0.988589 0.754718 23561 1 76 0.00351439 125 0 6.78652e+07 0.0317306 332837 6.86485e+07 3.29881e+06 23590 3.35787e+07 0 0.207297 0.988589 0.746106 6.78652e+07 0.0040961 1.50797e+07 1.62292e+07 1.50872e+07 145 1.51541e+07 9.73367e+06 0.00380485 1.51006e+07 49.9115 0.00484842 0.989914 0 50.0124 GTEX-PW2O-0226-SM-48TC7 2 B1 2 ~6.5x4.5mm aliquots; both with partially autolyzed medulla and well-preserved cortex 6.6 Adrenal Gland Adrenal Gland 0002369 119 1447 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991561 256295 0.975124 0.993562 0.808847 22348 1 76 0.00169589 152 0 7.08493e+07 0.024624 1.36083e+06 7.13083e+07 3.58107e+06 22369 3.52774e+07 0 0.166277 0.993562 0.80364 7.08493e+07 0.00230104 1.55331e+07 6.84972e+06 1.56308e+07 195 1.56192e+07 9.54651e+06 0.00199786 1.56676e+07 50.0775 0.0190837 0.995564 0 50.1567 GTEX-PW2O-0426-SM-48TCC 1 B1 6 ~9x1mm pieces. Minimal atherosclerosis 7.8 Blood Vessel Artery - Aorta 0001496 177 1390 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992554 285934 0.972769 0.994028 0.820978 21896 1 76 0.00169874 168 0 7.51613e+07 0.0268247 161061 7.56128e+07 3.87014e+06 21919 3.74258e+07 0 0.151791 0.994028 0.816075 7.51613e+07 0.00229163 1.61857e+07 5.90985e+06 1.6243e+07 186 1.6265e+07 1.38517e+07 0.00199474 1.62736e+07 50.0131 0.00213008 0.995502 0 50.0884 GTEX-PW2O-0526-SM-2I3DX 2 B1 2 ~ 8.5x7mm aliquots, one with focal fibrosis/consolidation-pending slide review 8.3 Lung Lung 0008952 184 1384 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.969029 134211 0.972497 0.971395 0.757099 24722 1 76 0.00267756 202 0 8.47337e+07 0.0271909 605289 8.72289e+07 8.88326e+06 24760 4.21386e+07 0 0.215398 0.971395 0.735442 8.47337e+07 0.00390021 1.88132e+07 8.50584e+06 1.9055e+07 213 1.91367e+07 1.3824e+07 0.0032874 1.8923e+07 49.7193 0.00693909 0.97376 0 50.3193 GTEX-PW2O-0526-SM-2IZHN 2 B1 2 ~ 8.5x7mm aliquots, one with focal fibrosis/consolidation-pending slide review 8.3 Lung Lung 0008952 184 1384 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-0826-SM-48TC5 1 B1 2 ~8.5x7.5mm aliquots. Exceptionally well-preserved; Islets appear reduced in number 6 Pancreas Pancreas 0001150 196 1375 BP-19458 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99116 165792 0.975699 0.992626 0.801249 21520 1 76 0.00195561 96 0 5.48698e+07 0.0241729 182672 5.52774e+07 2.78027e+06 21540 2.73288e+07 0 0.17445 0.992626 0.795341 5.48698e+07 0.00258176 1.24479e+07 1.17373e+07 1.25341e+07 108 1.25438e+07 1.34814e+07 0.00226822 1.25159e+07 49.9442 0.00330464 0.994093 0 50.1726 GTEX-PW2O-1226-SM-48TCH 1 B1 5 ~6.5x3.5mm pieces; mucosa exceptionally well-preserved and ~15-20% of thickness 6.3 Stomach Stomach 0000945 221 1355 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.985966 153560 0.979453 0.987768 0.832091 22399 1 76 0.00175403 282 0 6.74393e+07 0.0201973 797351 6.82745e+07 3.47688e+06 22417 3.35678e+07 0 0.147362 0.987768 0.821912 6.74393e+07 0.00248385 1.5554e+07 5.89145e+07 1.56097e+07 211 1.56416e+07 1.48388e+07 0.00211827 1.56357e+07 49.9907 0.0116786 0.98957 0 50.0893 GTEX-PW2O-1426-SM-48TCD 1 B1 2 ~10x8mm aliquots, one with area of central under-fixation 6.3 Testis Testis 0000473 237 1338 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99159 260268 0.935125 0.993043 0.759631 31762 1 76 0.00171486 142 0 6.48548e+07 0.0645862 836627 6.53092e+07 3.353e+06 31804 3.23006e+07 0 0.175494 0.993043 0.754347 6.48548e+07 0.0023453 1.35303e+07 7.92664e+06 1.35734e+07 145 1.36028e+07 1.05136e+07 0.00202962 1.35869e+07 49.9707 0.0128102 0.994497 0 50.0795 GTEX-PW2O-1526-SM-2I5FT 1 B1 6 ~ 7x3.5 pieces; squamous mucosa is ~1.5-2% of thickness 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 278 1299 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 TruSeq.v1 EXCLUDE 0.535201 218235 0.936403 0.543137 0.765088 33467 1 76 0.00393289 120 0 8.94408e+07 0.0632917 1.63977e+06 1.64674e+08 5.11108e+07 33534 4.38624e+07 0 0.171315 0.543137 0.415548 8.94408e+07 0.0276279 1.82605e+07 1.59413e+07 1.86415e+07 137 1.91496e+07 1.3637e+07 0.0156073 1.88696e+07 49.6318 0.00995766 0.551073 0 50.5163 GTEX-PW2O-1526-SM-2IZJD 1 B1 6 ~ 7x3.5 pieces; squamous mucosa is ~1.5-2% of thickness 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 278 1299 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-1526-SM-7RHHB 1 B1 6 ~ 7x3.5 pieces; squamous mucosa is ~1.5-2% of thickness 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 278 1299 BP-58200 RNA Extraction from Paxgene-derived Lysate Plate Based 11/18/2014 LCSET-6760 04/19/2015 TruSeq.v1 RNASEQ 0.991988 134954 0.966396 0.993885 0.773198 23994 1 76 0.00247779 151 0 6.55597e+07 0.0334277 607439 6.5963e+07 6.30646e+06 24013 3.2641e+07 0 0.193198 0.993885 0.76847 6.55597e+07 0.00390703 1.42716e+07 6.98884e+06 1.44521e+07 157 1.44106e+07 9.01194e+06 0.00319104 1.44276e+07 50.0295 0.00920878 0.995783 0 50.3142 GTEX-PW2O-1726-SM-2QU4Y 1 B1 2 ~ 10x7mm aliquots, ~15% interfascicular fat 6.7 Muscle Muscle - Skeletal 0011907 283 1296 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-1726-SM-2S1OO 1 B1 2 ~ 10x7mm aliquots, ~15% interfascicular fat 6.7 Muscle Muscle - Skeletal 0011907 283 1296 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.453407 55395 0.974663 0.456137 0.852605 17469 1 76 0.00415784 89 0 3.16677e+07 0.0251393 354071 6.94257e+07 2.65197e+07 17474 1.56244e+07 0 0.122058 0.456137 0.388905 3.16677e+07 0.00895863 6.60715e+06 5.14742e+06 6.93964e+06 101 6.97864e+06 5.35112e+06 0.00654387 6.73083e+06 49.0962 0.0051 0.458868 0 51.2272 GTEX-PW2O-1826-SM-2QU3A 1 B1 2 ~4x3.5mm pieces, relatively clean 6.3 Nerve Nerve - Tibial 0001323 287 1292 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-1826-SM-2S1OA 1 B1 2 ~4x3.5mm pieces, relatively clean 6.3 Nerve Nerve - Tibial 0001323 287 1292 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 TruSeq.v1 EXCLUDE 0.110962 12755 0.961625 0.11087 0.747988 16804 1 76 0.00484378 101 0 6.93322e+06 0.0380528 29335 6.25347e+07 2.20974e+07 16807 3.34241e+06 0 0.213637 0.11087 0.0829294 6.93322e+06 0.0118938 1.51087e+06 1.21780e+06 1.54294e+06 99 1.53845e+06 1.03028e+06 0.00837173 1.50868e+06 49.5115 0.0004691 0.110778 0 50.525 GTEX-PW2O-1826-SM-5SI7R 1 B1 2 ~4x3.5mm pieces, relatively clean 6.3 Nerve Nerve - Tibial 0001323 287 1292 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.987835 321235 0.966214 0.991517 0.750801 24681 1 76 0.00203627 210 0 8.62023e+07 0.033531 354387 8.69398e+07 9.07230e+06 24724 4.28289e+07 0 0.215413 0.991517 0.744432 8.62023e+07 0.0031892 1.89119e+07 9.14326e+06 1.90634e+07 209 1.90933e+07 1.28042e+07 0.0026106 1.91916e+07 50.1284 0.00407623 0.9952 0 50.1995 GTEX-PW2O-1926-SM-2QU39 1 B1 2 ~ 2x1mm pieces, relatively clean 7.7 Blood Vessel Artery - Tibial 0007610 297 1283 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PW2O-1926-SM-2S1OB 1 B1 2 ~ 2x1mm pieces, relatively clean 7.7 Blood Vessel Artery - Tibial 0007610 297 1283 BP-19459 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.939839 93044 0.973348 0.942603 0.81643 20682 1 76 0.00427265 139 0 7.01078e+07 0.0262228 278285 7.43769e+07 2.23949e+07 20703 3.47239e+07 0 0.156918 0.942603 0.769569 7.01078e+07 0.00671543 1.4883e+07 6.335e+06 1.52639e+07 144 1.53054e+07 1.263e+07 0.00549046 1.50279e+07 49.5425 0.00374155 0.945367 0 50.6317 GTEX-PWCY-0001-SM-2IJGL B1 Blood Whole Blood 0013756 BP-19391 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/14/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410051_R02C01 GTEX-PWCY-0001-SM-2XK14 B1 Blood Whole Blood 0013756 BP-19391 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/14/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R04C02 GTEX-PWCY-0001-SM-4X5ZP B1 Blood Whole Blood 0013756 BP-19391 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/14/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PWCY-0001-SM-5JK3J B1 Blood Whole Blood 0013756 BP-19391 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/14/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PWCY-0005-SM-2I3E2 B1 7.3 Blood Whole Blood 0013756 -446 BP-19393 RNA isolation_PAXgene Blood RNA (Manual) 10/14/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.537082 524209 0.960272 0.561266 0.794053 18100 1 76 0.00390897 92 0 7.08103e+07 0.0382954 254214 1.26162e+08 4.02363e+07 18102 3.37157e+07 0 0.166219 0.561266 0.445675 7.08103e+07 0.0696955 1.49892e+07 9.10513e+07 1.57608e+07 110 1.70903e+07 1.6419e+07 0.0353849 1.65157e+07 49.1451 0.00201499 0.585451 0 51.2546 GTEX-PWCY-0005-SM-2IZHR B1 7.3 Blood Whole Blood 0013756 -446 BP-19393 RNA isolation_PAXgene Blood RNA (Manual) 10/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWCY-0005-SM-33HBP B1 7.3 Blood Whole Blood 0013756 -446 BP-19393 RNA isolation_PAXgene Blood RNA (Manual) 10/14/2011 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.790552 953854 0.954894 0.79359 0.791695 18816 1 76 0.00260434 136 0 9.91856e+07 0.043191 365209 1.24984e+08 1.37874e+07 18829 4.91354e+07 0 0.163199 0.79359 0.628281 9.91856e+07 0.00769573 2.19178e+07 1.05239e+08 2.24678e+07 157 2.24955e+07 2.22878e+07 0.0051403 2.22815e+07 49.761 0.00292206 0.796627 0 50.6195 GTEX-PWCY-0005-SM-DHXL3 B1 7.3 Blood Whole Blood 0013756 -446 BP-19393 RNA isolation_PAXgene Blood RNA (Manual) 10/14/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.978722 1.01438e+06 0.964905 0.979567 0.809826 17178 1 76 0.00224746 199 0 1.08013e+08 0.0344909 290295 1.10266e+08 6.02324e+06 17186 5.38053e+07 0 0.155079 0.979567 0.79328 1.08013e+08 0.00282164 2.46841e+07 1.44084e+08 2.49752e+07 219 2.49732e+07 2.78941e+07 0.0025343 2.47829e+07 49.8088 0.00263267 0.980413 0 50.2931 GTEX-PWCY-0008-SM-48TE9 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 276 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992876 474915 0.975836 0.994557 0.851055 20009 1 76 0.00148852 143 0 6.44556e+07 0.023805 170271 6.48083e+07 3.27171e+06 20024 3.20985e+07 0 0.124781 0.994557 0.846423 6.44556e+07 0.0020763 1.436e+07 6.68393e+06 1.44527e+07 151 1.45236e+07 1.38426e+07 0.00178191 1.43902e+07 49.7693 0.0026273 0.996237 0 50.1608 GTEX-PWCY-0226-SM-48TD8 0 B1 2 pieces, 15x5 mm; cortex & medulla well preserved; 30% periadrenal fat 7.7 Adrenal Gland Adrenal Gland 0002369 189 827 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991544 302806 0.978082 0.993804 0.851517 21361 1 76 0.00159075 149 0 6.40191e+07 0.0216104 1.25112e+06 6.44182e+07 3.45068e+06 21374 3.1864e+07 0 0.126565 0.993804 0.846241 6.40191e+07 0.00227989 1.41792e+07 6.2219e+06 1.4255e+07 171 1.42626e+07 1.06985e+07 0.00193454 1.4304e+07 50.0724 0.0194219 0.996065 0 50.1333 GTEX-PWCY-0326-SM-43IRU 0 B1 6 pieces, ~9x1 mm; normal aorta 7.2 Blood Vessel Artery - Aorta 0001496 194 822 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/13/2013 TruSeq.v1 RNASEQ 0.993408 344613 0.974229 0.994502 0.83143 21183 1 76 0.0016095 145 0 6.71313e+07 0.0253752 189571 6.75024e+07 3.36052e+06 21199 3.34298e+07 0 0.142799 0.994502 0.826859 6.71313e+07 0.00220421 1.45832e+07 4.87389e+06 1.46312e+07 157 1.46526e+07 1.32193e+07 0.00190653 1.46357e+07 49.9711 0.00280836 0.995597 0 50.0823 GTEX-PWCY-0426-SM-48TCW 0 B1 2 pieces, 2.2 mm diameter; normal 8.4 Blood Vessel Artery - Coronary 0001621 198 819 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992826 249125 0.973445 0.994492 0.841775 20322 1 76 0.00156865 126 0 5.78512e+07 0.0261383 246944 5.81716e+07 2.88833e+06 20334 2.88123e+07 0 0.13167 0.994492 0.837139 5.78512e+07 0.00225823 1.23543e+07 4.49595e+06 1.24414e+07 137 1.24442e+07 1.17163e+07 0.00191286 1.24428e+07 49.9972 0.0042451 0.996157 0 50.1758 GTEX-PWCY-0526-SM-2I3ER 0 B1 2 pieces, ~10x8 mm; normal, < 5% fat 8.8 Heart Heart - Left Ventricle 0006566 203 815 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 EXCLUDE 0.873431 78506 0.984216 0.875144 0.876351 20496 1 76 0.00221556 196 0 7.37232e+07 0.0154927 1.80019e+06 8.42411e+07 9.10368e+06 20506 3.6679e+07 0 0.107864 0.875144 0.766934 7.37232e+07 0.00370844 1.60212e+07 7.86975e+06 1.66634e+07 210 1.66205e+07 1.3836e+07 0.00296054 1.61721e+07 49.3163 0.0213695 0.876858 0 50.9824 GTEX-PWCY-0526-SM-2IZIG 0 B1 2 pieces, ~10x8 mm; normal, < 5% fat 8.8 Heart Heart - Left Ventricle 0006566 203 815 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWCY-0526-SM-5P9HG 0 B1 2 pieces, ~10x8 mm; normal, < 5% fat 8.8 Heart Heart - Left Ventricle 0006566 203 815 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.989892 451357 0.983668 0.990232 0.850778 22192 1 76 0.00254459 376 0 1.52805e+08 0.0160651 3.23702e+06 1.54313e+08 4.5985e+06 22210 7.61628e+07 0 0.13289 0.990232 0.842468 1.52805e+08 0.00301682 3.31769e+07 4.54959e+07 3.35877e+07 349 3.32434e+07 2.86649e+07 0.00278062 3.35761e+07 50.249 0.020977 0.990572 0 50.3077 GTEX-PWCY-0526-SM-5PNU8 0 B1 2 pieces, ~10x8 mm; normal, < 5% fat 8.8 Heart Heart - Left Ventricle 0006566 203 815 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4917 03/27/2014 TruSeq.v1 EXCLUDE 0.992691 220818 0.983242 0.994851 0.86448 20064 1 76 0.00161606 198 0 7.65189e+07 0.0164897 1.59073e+06 7.69149e+07 7.55611e+06 20071 3.81125e+07 0 0.118762 0.994851 0.860029 7.65189e+07 0.00260088 1.67768e+07 1.40246e+07 1.68597e+07 228 1.68012e+07 1.43163e+07 0.0021074 1.69876e+07 50.2758 0.0206817 0.997011 0 50.1232 GTEX-PWCY-0726-SM-48TCS 1 B1 4 pieces, ~6x4 mm; some epithelium with excess glycogen 9.2 Esophagus Esophagus - Mucosa 0006920 216 803 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990582 301037 0.977014 0.992826 0.836685 20912 1 76 0.00169934 142 0 6.414e+07 0.0227428 381951 6.46035e+07 3.43769e+06 20923 3.19306e+07 0 0.140329 0.992826 0.830683 6.414e+07 0.0024275 1.4343e+07 8.48613e+06 1.44565e+07 151 1.44989e+07 1.32003e+07 0.0020626 1.44391e+07 49.8968 0.00591223 0.995071 0 50.1971 GTEX-PWCY-0826-SM-48TCR 0 B1 6 pieces, up to 7x3mm 8.3 Esophagus Esophagus - Muscularis 0004648 218 802 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990477 269262 0.976253 0.993047 0.827151 20868 1 76 0.00161346 138 0 5.7981e+07 0.0234514 456499 5.83869e+07 3.10191e+06 20885 2.88466e+07 0 0.149102 0.993047 0.8214 5.7981e+07 0.00233307 1.25414e+07 4.60289e+06 1.2598e+07 143 1.26234e+07 1.01811e+07 0.00197233 1.26574e+07 50.0672 0.00781851 0.995617 0 50.1126 GTEX-PWCY-0926-SM-48TD7 1 B1 6 pieces, up to 10x4mm. mucosa varies in preservation from very good to moderate 7.3 Stomach Stomach 0000945 221 799 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.98727 165870 0.982024 0.989017 0.859827 20822 1 76 0.00148324 249 0 5.75954e+07 0.0175555 513281 5.8235e+07 2.95998e+06 20833 2.86611e+07 0 0.122197 0.989017 0.850384 5.75954e+07 0.00214684 1.33299e+07 5.2841e+07 1.339e+07 167 1.34396e+07 1.56911e+07 0.00181445 1.33794e+07 49.8877 0.00881396 0.990763 0 50.1125 GTEX-PWCY-1026-SM-48TD4 2 B1 6 pieces, ~6x2 mm; mucosa varies in preservation from good to poor 7 Colon Colon - Transverse 0001157 230 791 BP-19460 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.989339 264649 0.975457 0.99137 0.81245 22389 1 76 0.00185722 154 0 6.22206e+07 0.0236987 1.26944e+06 6.27622e+07 2.80421e+06 22408 3.09426e+07 0 0.163006 0.99137 0.805438 6.22206e+07 0.00264697 1.38799e+07 7.1147e+06 1.39208e+07 169 1.39205e+07 8.159e+06 0.00225129 1.39901e+07 50.1248 0.0202262 0.9934 0 50.0736 GTEX-PWCY-1326-SM-48TCU 0 B1 2 pieces, 10x4 mm; numerous ova and follicles in various stages of normal function 7.5 Ovary Ovary 0000992 249 775 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99196 270689 0.968285 0.993527 0.767777 22954 1 76 0.00165144 132 0 6.1363e+07 0.0314509 115652 6.17628e+07 3.33519e+06 22985 3.05577e+07 0 0.200509 0.993527 0.762807 6.1363e+07 0.00227775 1.35446e+07 6.57428e+06 1.36097e+07 139 1.36429e+07 1.11838e+07 0.0019641 1.36099e+07 49.9395 0.00187252 0.995095 0 50.1199 GTEX-PWCY-1426-SM-48TCT 0 B1 2 pieces, 10x9mm, 11x11mm; endometrium is 5x1 mm maximum 6.7 Uterus Uterus 0000995 255 770 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.98843 206143 0.962325 0.990039 0.758646 23555 1 76 0.00176496 135 0 6.52164e+07 0.0374258 238189 6.58725e+07 2.98579e+06 23584 3.24569e+07 0 0.203679 0.990039 0.751089 6.52164e+07 0.00246908 1.41777e+07 6.09689e+06 1.42446e+07 150 1.42535e+07 1.03709e+07 0.00211645 1.42736e+07 50.0352 0.00361591 0.991649 0 50.1177 GTEX-PWCY-1726-SM-48TD3 1 B1 6 pieces, ~9x3mm, 5x6mm; all with squamous lining 8.2 Vagina Vagina 0000996 272 755 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991733 297112 0.975351 0.993239 0.78871 22031 1 76 0.00180269 118 0 5.53387e+07 0.0243131 125053 5.57154e+07 2.73211e+06 22048 2.75554e+07 0 0.18664 0.993239 0.783377 5.53387e+07 0.00250503 1.2389e+07 6.89563e+06 1.24433e+07 126 1.24859e+07 1.03136e+07 0.00215333 1.24291e+07 49.8862 0.0022445 0.994744 0 50.1094 GTEX-PWCY-1826-SM-2QU4P 1 B1 6 pieces, ~8x3 mm.; numerous tissue tears in dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 281 747 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWCY-1826-SM-2S1OK 1 B1 6 pieces, ~8x3 mm.; numerous tissue tears in dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 281 747 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.144591 9064 0.97171 0.145129 0.824717 16885 1 76 0.00450324 107 0 8.60849e+06 0.0280934 66137 5.93162e+07 2.33792e+07 16887 4.22547e+06 0 0.146993 0.145129 0.11969 8.60849e+06 0.00893108 1.86216e+06 1.10774e+06 1.91757e+06 102 1.9251e+06 1.45025e+06 0.00670896 1.88388e+06 49.459 0.00111499 0.145666 0 50.733 GTEX-PWCY-1826-SM-5SI7U 1 B1 6 pieces, ~8x3 mm.; numerous tissue tears in dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 281 747 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990889 203859 0.972864 0.993262 0.831451 22273 1 76 0.00188884 142 0 5.80631e+07 0.0269543 433562 5.84569e+07 5.3324e+06 22290 2.88991e+07 0 0.141413 0.993262 0.825849 5.80631e+07 0.00319166 1.27272e+07 6.39073e+06 1.28273e+07 150 1.27897e+07 9.80116e+06 0.00253869 1.2903e+07 50.2206 0.00741677 0.995636 0 50.1959 GTEX-PWCY-1826-SM-DHXIZ 1 B1 6 pieces, ~8x3 mm.; numerous tissue tears in dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 281 747 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994692 322428 0.97386 0.995567 0.838074 23026 1 76 0.00219109 180 0 7.22501e+07 0.0259418 485294 7.25718e+07 4.17524e+06 23046 3.60121e+07 0 0.135786 0.995567 0.834358 7.22501e+07 0.00252759 1.58253e+07 7.92653e+06 1.60565e+07 181 1.60006e+07 1.3299e+07 0.00235919 1.5945e+07 49.913 0.00668709 0.996441 0 50.3626 GTEX-PWCY-1926-SM-3NB25 1 B1 2 pieces, large aliquots 17x11 mm,15x15 mm; central, probably unfixed, defects 7 Adipose Tissue Adipose - Subcutaneous 0002190 285 744 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985546 408805 0.976754 0.990201 0.827065 22603 1 76 0.0037923 210 0 9.45057e+07 0.0228947 730714 9.5441e+07 1.65584e+07 22626 4.68872e+07 0 0.14969 0.990201 0.81896 9.45057e+07 0.00590028 2.07378e+07 1.08805e+07 2.08862e+07 234 2.10163e+07 1.61199e+07 0.00484134 2.10286e+07 50.0145 0.00765619 0.994855 0 50.1783 GTEX-PWCY-2026-SM-2S1NF 1 B1 2 pieces, ~10x10 mm; one with 10% fat 8.1 Muscle Muscle - Skeletal 0011907 290 740 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.166824 6800 0.975808 0.162453 0.860134 13456 1 76 0.00402092 92 0 7.806e+06 0.0239386 80109 4.80507e+07 1.60635e+07 13456 3.73427e+06 0 0.115674 0.162453 0.139732 7.806e+06 0.0106144 1.72457e+06 1.09027e+06 1.78116e+06 101 1.68089e+06 1.33921e+06 0.00740638 1.62484e+06 49.1522 0.00166718 0.158083 0 50.807 GTEX-PWCY-2026-SM-5Q5BF 1 B1 2 pieces, ~10x10 mm; one with 10% fat 8.1 Muscle Muscle - Skeletal 0011907 290 740 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4952 03/29/2014 TruSeq.v1 EXCLUDE 0.989445 234557 0.984139 0.992418 0.878203 18470 1 76 0.00153231 202 0 7.22644e+07 0.0156608 835035 7.28165e+07 5.73034e+06 18474 3.59514e+07 0 0.105935 0.992418 0.871545 7.22644e+07 0.00259601 1.57626e+07 1.13103e+07 1.58729e+07 205 1.58243e+07 1.36485e+07 0.00206257 1.59972e+07 50.2718 0.0114677 0.995391 0 50.1743 GTEX-PWCY-2026-SM-5QGQ9 1 B1 2 pieces, ~10x10 mm; one with 10% fat 8.1 Muscle Muscle - Skeletal 0011907 290 740 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4954 03/29/2014 TruSeq.v1 EXCLUDE 0.994378 172220 0.984305 0.995412 0.874668 17734 1 76 0.00157481 136 0 6.25685e+07 0.0155114 769582 6.28569e+07 4.33427e+06 17737 3.1199e+07 0 0.109637 0.995412 0.870655 6.25685e+07 0.00230522 1.36355e+07 1.11233e+07 1.37307e+07 165 1.36455e+07 1.18562e+07 0.00193963 1.378e+07 50.2451 0.0122434 0.996446 0 50.1739 GTEX-PWCY-2026-SM-5SI8R 1 B1 2 pieces, ~10x10 mm; one with 10% fat 8.1 Muscle Muscle - Skeletal 0011907 290 740 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.992803 266085 0.983988 0.994624 0.866833 19710 1 76 0.00165722 278 0 1.11288e+08 0.0158052 1.51242e+06 1.11889e+08 9.75295e+06 19719 5.54566e+07 0 0.117155 0.994624 0.862173 1.11288e+08 0.00260766 2.41882e+07 2.36672e+07 2.41017e+07 327 2.40394e+07 2.16034e+07 0.00213157 2.44289e+07 50.4019 0.0135171 0.996445 0 49.9104 GTEX-PWCY-2126-SM-48TEC 0 B1 2 pieces, ~4.5x2.5; one with 20% fat on edge 7.5 Nerve Nerve - Tibial 0001323 293 738 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992914 269825 0.975665 0.994208 0.813031 22483 1 76 0.00162334 142 0 6.6427e+07 0.0240225 192076 6.6814e+07 3.41055e+06 22504 3.30836e+07 0 0.162634 0.994208 0.808322 6.6427e+07 0.00226866 1.46576e+07 5.30466e+06 1.4737e+07 163 1.47556e+07 1.18678e+07 0.00194558 1.47249e+07 49.9479 0.00287479 0.995502 0 50.1351 GTEX-PWCY-2226-SM-2QU4X 0 B1 2 pieces, 2 mm diameter; no extraneous fat 8.4 Blood Vessel Artery - Tibial 0007610 298 733 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWCY-2226-SM-2S1OP 0 B1 2 pieces, 2 mm diameter; no extraneous fat 8.4 Blood Vessel Artery - Tibial 0007610 298 733 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.659219 44555 0.974288 0.661013 0.829955 18943 1 76 0.00429474 101 0 4.34788e+07 0.0253604 131839 6.57761e+07 2.58612e+07 18950 2.15178e+07 0 0.144333 0.661013 0.548611 4.34788e+07 0.00767318 9.16554e+06 3.67624e+06 9.4419e+06 99 9.45843e+06 8.30876e+06 0.00597938 9.25412e+06 49.4541 0.00200436 0.662806 0 50.7426 GTEX-PWCY-2326-SM-2I3EQ 1 B1 2 pieces, 8x8mm, 9x9mm; several cystic follicles 6.9 Thyroid Thyroid 0002046 312 721 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.772454 89365 0.96745 0.775195 0.759224 23377 1 76 0.00244817 129 0 6.66546e+07 0.0322446 293399 8.59843e+07 1.04221e+07 23412 3.30752e+07 0 0.208225 0.775195 0.588547 6.66546e+07 0.00421583 1.44902e+07 6.42307e+06 1.47577e+07 141 1.48361e+07 1.03779e+07 0.00332888 1.46237e+07 49.6396 0.00341224 0.777936 0 50.4574 GTEX-PWCY-2326-SM-2IZIF 1 B1 2 pieces, 8x8mm, 9x9mm; several cystic follicles 6.9 Thyroid Thyroid 0002046 312 721 BP-19461 RNA isolation_PAXgene Tissue miRNA 10/19/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-0004-SM-2IJGN B1 Blood Whole Blood 0013756 -124 BP-19476 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410051_R03C01 GTEX-PWN1-0004-SM-2XK15 B1 Blood Whole Blood 0013756 -124 BP-19476 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R06C01 GTEX-PWN1-0004-SM-4X62D B1 Blood Whole Blood 0013756 -124 BP-19476 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PWN1-0004-SM-5JK3S B1 Blood Whole Blood 0013756 -124 BP-19476 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/19/2011 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PWN1-0006-SM-2IZJQ B1 9.4 Blood Whole Blood 0013756 -124 BP-19462 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-0006-SM-2S1NG B1 9.4 Blood Whole Blood 0013756 -124 BP-19462 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2011 LCSET-1464 06/08/2012 TruSeq.v1 EXCLUDE 0.1371 166611 0.883815 0.138179 0.634842 15730 1 76 0.00503631 99 0 1.08439e+07 0.115774 16038 7.84771e+07 2.56906e+07 15731 5.30207e+06 0 0.248973 0.138179 0.0877217 1.08439e+07 0.0101586 2.1374e+06 1.11122e+07 2.1986e+06 109 2.23419e+06 1.57853e+06 0.00757746 2.1767e+06 49.3483 0.000204365 0.139257 0 50.7058 GTEX-PWN1-0006-SM-5SI7T B1 9.4 Blood Whole Blood 0013756 -124 BP-19462 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989652 554690 0.947915 0.992648 0.75983 20327 1 76 0.00237123 119 0 6.62117e+07 0.0516053 111199 6.67021e+07 6.17476e+06 20342 3.29242e+07 0 0.188085 0.992648 0.754244 6.62117e+07 0.00367547 1.41899e+07 2.3481e+07 1.43053e+07 136 1.43622e+07 1.2048e+07 0.00302138 1.43324e+07 49.9481 0.0016671 0.995644 0 50.2024 GTEX-PWN1-0006-SM-CYPR2 B1 9.4 Blood Whole Blood 0013756 -124 BP-19462 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.985449 972203 0.952416 0.986321 0.768823 21096 1 76 0.00261646 206 0 1.00335e+08 0.0470704 179527 1.01727e+08 6.8545e+06 21129 4.99946e+07 0 0.183593 0.986321 0.758307 1.00335e+08 0.00314355 2.1793e+07 4.0554e+07 2.18641e+07 222 2.19169e+07 1.96189e+07 0.00287977 2.18319e+07 49.9028 0.00176479 0.987193 0 50.0814 GTEX-PWN1-0008-SM-48TEA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 210 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992667 439131 0.976424 0.994577 0.876222 19253 1 76 0.00143402 124 0 5.35513e+07 0.0232366 135290 5.38432e+07 2.65923e+06 19263 2.66623e+07 0 0.100201 0.994577 0.871471 5.35513e+07 0.00212069 1.19071e+07 7.0518e+06 1.20178e+07 123 1.20684e+07 1.33589e+07 0.00177669 1.19625e+07 49.7797 0.00251266 0.996488 0 50.2312 GTEX-PWN1-0126-SM-2I3FK 1 B1 6 pieces up to 8x2.5 mm 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 212 1078 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.528459 92214 0.969999 0.549564 0.807102 23801 1 76 0.00361766 149 0 8.02478e+07 0.0297229 530486 1.46021e+08 4.14311e+07 23822 3.84415e+07 0 0.162896 0.549564 0.443554 8.02478e+07 0.0668289 1.6641e+07 1.0863e+07 1.71028e+07 136 1.84026e+07 1.29265e+07 0.0340095 1.80748e+07 49.5508 0.00363295 0.57067 0 50.6843 GTEX-PWN1-0126-SM-2IZIM 1 B1 6 pieces up to 8x2.5 mm 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 212 1078 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-0226-SM-2QU2P 1 B1 2 pieces up to 11x9mm; central defects from poor fixation 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 209 1081 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-0226-SM-2S1OZ 1 B1 2 pieces up to 11x9mm; central defects from poor fixation 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 209 1081 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.368838 37816 0.972982 0.368215 0.813522 19602 1 76 0.00254189 102 0 3.27076e+07 0.0257441 161127 8.88276e+07 6.63056e+06 19611 1.60834e+07 0 0.15946 0.368215 0.299551 3.27076e+07 0.0173067 7.09847e+06 3.47884e+06 7.37588e+06 111 7.35513e+06 5.31149e+06 0.00993682 7.08048e+06 49.0487 0.00181393 0.367591 0 50.9583 GTEX-PWN1-0226-SM-5SI7O 1 B1 2 pieces up to 11x9mm; central defects from poor fixation 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 209 1081 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.988609 327292 0.974787 0.992646 0.825404 22335 1 76 0.00198646 203 0 7.85853e+07 0.0249119 389842 7.91675e+07 7.23681e+06 22354 3.90517e+07 0 0.149383 0.992646 0.819334 7.85853e+07 0.00333304 1.72161e+07 8.78926e+06 1.73198e+07 207 1.73757e+07 1.33651e+07 0.00265701 1.74627e+07 50.1248 0.00492427 0.996683 0 50.1502 GTEX-PWN1-0226-SM-DKPO9 1 B1 2 pieces up to 11x9mm; central defects from poor fixation 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 209 1081 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992618 412214 0.975966 0.994539 0.832982 22774 1 76 0.00286729 280 0 9.6322e+07 0.0237212 457533 9.68509e+07 1.04856e+07 22798 4.79771e+07 0 0.142984 0.994539 0.828433 9.6322e+07 0.00290474 2.10871e+07 9.99193e+06 2.13959e+07 289 2.14297e+07 1.72657e+07 0.00288598 2.1229e+07 49.7647 0.0047241 0.99646 0 50.3635 GTEX-PWN1-0626-SM-48TDT 1 B1 6 pieces, 4 with mucosa, 2 without, mucosa up to 0.4mm; up to 7.5x2mm 9.1 Esophagus Esophagus - Mucosa 0006920 126 1164 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991066 267969 0.977513 0.993067 0.837351 21354 1 76 0.0016891 137 0 6.44999e+07 0.0222453 326142 6.49502e+07 3.39190e+06 21367 3.21118e+07 0 0.140161 0.993067 0.831546 6.44999e+07 0.00254852 1.44554e+07 7.36604e+06 1.45471e+07 151 1.45796e+07 1.33417e+07 0.00211794 1.45482e+07 49.946 0.00502142 0.995068 0 50.158 GTEX-PWN1-0726-SM-48TDR 1 B1 6 pieces, up to 7.7x4 mm 8.2 Esophagus Esophagus - Muscularis 0004648 128 1162 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991081 217927 0.977545 0.993293 0.869569 21182 1 76 0.00154392 167 0 6.62336e+07 0.02217 504507 6.66808e+07 3.62748e+06 21192 3.29684e+07 0 0.107976 0.993293 0.863736 6.62336e+07 0.00221215 1.43058e+07 5.42007e+06 1.44099e+07 175 1.44012e+07 1.22712e+07 0.00187729 1.44525e+07 50.0888 0.007566 0.995504 0 50.1813 GTEX-PWN1-1426-SM-48TDF 1 B1 6 pieces up to ~8x3 mm; mucosa up to 0.4mm 7.6 Colon Colon - Transverse 0001157 142 1148 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.99196 202392 0.973615 0.993554 0.803876 22432 1 76 0.00178375 140 0 6.12244e+07 0.0258669 696589 6.16216e+07 3.18974e+06 22457 3.04936e+07 0 0.169738 0.993554 0.798695 6.12244e+07 0.0024902 1.36508e+07 6.99636e+06 1.37166e+07 156 1.36829e+07 9.04123e+06 0.00213641 1.377e+07 50.1586 0.0113043 0.995148 0 50.1203 GTEX-PWN1-1526-SM-48TDA 1 B1 6 pieces, one not well stained/preserved; mucosa 0.8 mm; ~7x3mm 7 Stomach Stomach 0000945 132 1158 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.984892 187018 0.982774 0.986867 0.859568 21376 1 76 0.00168907 265 0 6.5734e+07 0.0169237 337549 6.66087e+07 3.3268e+06 21391 3.27091e+07 0 0.123206 0.986867 0.84828 6.5734e+07 0.00241247 1.5208e+07 6.78839e+07 1.53088e+07 184 1.53742e+07 1.91372e+07 0.00205005 1.52739e+07 49.8364 0.00506764 0.988842 0 50.1653 GTEX-PWN1-1626-SM-2QU4N 1 B1 2 pieces, one 14 x 6mm with moderate fragmentation 8.1 Muscle Muscle - Skeletal 0011907 220 1070 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-1626-SM-2S1OL 1 B1 2 pieces, one 14 x 6mm with moderate fragmentation 8.1 Muscle Muscle - Skeletal 0011907 220 1070 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.524842 79401 0.977118 0.527485 0.865577 17738 1 76 0.00423581 96 0 4.09065e+07 0.0226356 452743 7.75502e+07 3.0026e+07 17744 2.01838e+07 0 0.111541 0.527485 0.456579 4.09065e+07 0.008845 8.68351e+06 7.13528e+06 9.09749e+06 102 9.15486e+06 7.60028e+06 0.00652886 8.80458e+06 49.0248 0.00583807 0.530128 0 51.1641 GTEX-PWN1-1726-SM-2QU37 1 B1 2 pieces; 40% of aliquot is fat and stroma; nerve is ~1.2mm 6.6 Nerve Nerve - Tibial 0001323 217 1073 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-1726-SM-2S1O9 1 B1 2 pieces; 40% of aliquot is fat and stroma; nerve is ~1.2mm 6.6 Nerve Nerve - Tibial 0001323 217 1073 BP-19817 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1464 06/08/2012 TruSeq.v1 RNASEQ 0.725646 85005 0.96822 0.729182 0.789745 22723 1 76 0.00446753 137 0 5.9135e+07 0.0314651 276380 8.10977e+07 2.86948e+07 22747 2.92094e+07 0 0.178475 0.729182 0.575868 5.9135e+07 0.00860683 1.27826e+07 6.65818e+06 1.31388e+07 127 1.3222e+07 9.39128e+06 0.00652714 1.29646e+07 49.5084 0.00340799 0.732719 0 50.687 GTEX-PWN1-1826-SM-2QU3G 1 B1 2 pieces, 1 with 1 mm artery and vein; 1 with 1 mm artery; each with 20% fat and stroma 7.8 Blood Vessel Artery - Tibial 0007610 219 1071 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWN1-1826-SM-2S1PE 1 B1 2 pieces, 1 with 1 mm artery and vein; 1 with 1 mm artery; each with 20% fat and stroma 7.8 Blood Vessel Artery - Tibial 0007610 219 1071 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.829591 58539 0.974912 0.835903 0.840934 21334 1 76 0.00245684 110 0 6.32492e+07 0.0246874 258774 7.56656e+07 5.95813e+06 21351 3.12661e+07 0 0.133978 0.835903 0.70294 6.32492e+07 0.016479 1.34748e+07 4.7785e+06 1.37226e+07 117 1.39103e+07 1.19171e+07 0.00941497 1.37023e+07 49.6233 0.00341997 0.842216 0 50.4556 GTEX-PWN1-2026-SM-48TD9 1 B1 2 pieces, 1, 6x6 mm with secretory endometrium 2mm thick; 1, 14x7.7 mm without endometrium 8.3 Uterus Uterus 0000995 162 1128 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992804 342907 0.972896 0.994462 0.837451 21579 1 76 0.00159762 140 0 6.69243e+07 0.0267594 108877 6.7297e+07 3.55252e+06 21594 3.33254e+07 0 0.135445 0.994462 0.832814 6.69243e+07 0.00228972 1.45075e+07 5.00691e+06 1.45757e+07 159 1.45781e+07 1.28609e+07 0.00194309 1.46129e+07 50.0597 0.00161786 0.996121 0 50.1172 GTEX-PWN1-2426-SM-48TDD 0 B1 2 pieces up to 13x8 mm; recent corpora lutea, no ova; 1 with 60% vessels and stroma 7.7 Ovary Ovary 0000992 157 1133 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991737 311577 0.966492 0.993808 0.772056 22854 1 76 0.00166336 169 0 7.62761e+07 0.0332707 146629 7.67514e+07 4.11724e+06 22889 3.79704e+07 0 0.194436 0.993808 0.767275 7.62761e+07 0.0022459 1.6755e+07 7.57339e+06 1.68471e+07 174 1.68935e+07 1.38567e+07 0.00195402 1.68638e+07 49.956 0.00191044 0.995879 0 50.1372 GTEX-PWN1-2526-SM-48TDS 1 B1 6 pieces up to 7x3.5 mm; good epithelial preservation ~0.3 mm thick 8.1 Vagina Vagina 0000996 189 1101 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992248 229063 0.972518 0.993829 0.796869 22537 1 76 0.001743 130 0 6.04192e+07 0.0272601 148641 6.07943e+07 2.9716e+06 22557 3.00933e+07 0 0.17565 0.993829 0.791951 6.04192e+07 0.00233683 1.33063e+07 6.04981e+06 1.33704e+07 142 1.33926e+07 1.06515e+07 0.00203944 1.33775e+07 49.9718 0.00244498 0.995409 0 50.1201 GTEX-PWN1-2626-SM-2I3FH 1 B1 2 pieces up to 10.5x6.5 mm 7.3 Thyroid Thyroid 0002046 116 1174 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.721566 72933 0.965569 0.723184 0.732526 23316 1 76 0.0024619 111 0 5.73465e+07 0.034157 342202 7.92972e+07 1.03981e+07 23351 2.84871e+07 0 0.233043 0.723184 0.529751 5.73465e+07 0.00421701 1.24112e+07 5.06248e+06 1.26665e+07 121 1.26724e+07 8.13925e+06 0.00333749 1.25145e+07 49.6865 0.00431544 0.724803 0 50.509 GTEX-PWN1-2626-SM-2IZIJ 1 B1 2 pieces up to 10.5x6.5 mm 7.3 Thyroid Thyroid 0002046 116 1174 BP-19818 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0004-SM-2IJGP D1 Blood Whole Blood 0013756 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410051_R04C01 GTEX-PWO3-0004-SM-2XK16 D1 Blood Whole Blood 0013756 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R02C01 GTEX-PWO3-0004-SM-4X622 D1 Blood Whole Blood 0013756 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PWO3-0004-SM-5JK3T D1 Blood Whole Blood 0013756 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PWO3-0005-SM-2I5FS D1 6.9 Blood Whole Blood 0013756 1278 BP-19495 RNA isolation_PAXgene Blood RNA (Manual) 10/20/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.534966 530989 0.965504 0.542623 0.777814 21200 1 76 0.00422855 119 0 9.79197e+07 0.0333092 856592 1.80456e+08 5.79658e+07 21212 4.79852e+07 0 0.187689 0.542623 0.42206 9.79197e+07 0.0297276 2.13279e+07 7.68185e+07 2.1995e+07 137 2.25612e+07 2.00223e+07 0.0167981 2.20943e+07 49.4772 0.00474681 0.55028 0 50.77 GTEX-PWO3-0005-SM-2IZJC D1 6.9 Blood Whole Blood 0013756 1278 BP-19495 RNA isolation_PAXgene Blood RNA (Manual) 10/20/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R10a-SM-AHZ7S D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1279 ChIP-Seq GTEX-PWO3-0011-R1A-SM-2I5EW D1, A1 6.8 Brain Brain - Hippocampus 0001954 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.773185 683434 0.934938 0.776587 0.816813 22503 1 76 0.00291932 129 0 6.82736e+07 0.0646632 7.38790e+06 8.79149e+07 1.70632e+07 22522 3.38319e+07 0 0.118125 0.776587 0.634326 6.82736e+07 0.0100963 1.42619e+07 3.83662e+07 1.51212e+07 164 1.50521e+07 6.27715e+06 0.00649209 1.45412e+07 49.1369 0.0840347 0.779988 0 51.4623 GTEX-PWO3-0011-R1A-SM-2IZIW D1, A1 6.8 Brain Brain - Hippocampus 0001954 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R2A-SM-2IZJO D1, A1 6.7 Brain Brain - Substantia nigra 0002038 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R2A-SM-2S1OX D1, A1 6.7 Brain Brain - Substantia nigra 0002038 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.728541 1.01449e+06 0.902859 0.733353 0.768668 21608 1 76 0.00251125 119 0 5.53038e+07 0.0968603 4.41091e+06 7.54122e+07 6.18994e+06 21622 2.73533e+07 0 0.134192 0.733353 0.563705 5.53038e+07 0.0165391 1.11991e+07 4.57268e+07 1.18736e+07 118 1.19107e+07 4.80809e+06 0.00947915 1.14456e+07 49.0042 0.0584907 0.738165 0 51.4617 GTEX-PWO3-0011-R3A-SM-2I5EX D1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.918426 1.01414e+06 0.935255 0.92455 0.802721 24541 1 76 0.00296173 268 0 9.83827e+07 0.0644282 8.5501e+06 1.06411e+08 2.12742e+07 24565 4.87044e+07 0 0.132534 0.92455 0.742156 9.83827e+07 0.0102106 2.06944e+07 5.55145e+07 2.12224e+07 309 2.11964e+07 8.98653e+06 0.00656216 2.1208e+07 50.0136 0.0803494 0.930673 0 50.6298 GTEX-PWO3-0011-R3A-SM-2IZIX D1, A1 6.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R5A-SM-2I5EZ D1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.941314 894961 0.946736 0.94758 0.810989 24938 1 76 0.00292194 268 0 1.14568e+08 0.0530002 1.14236e+07 1.20906e+08 2.22792e+07 24962 5.67466e+07 0 0.135747 0.94758 0.768477 1.14568e+08 0.00994784 2.41111e+07 5.51432e+07 2.51999e+07 300 2.5033e+07 9.97006e+06 0.00641166 2.47671e+07 49.733 0.0944836 0.953846 0 51.104 GTEX-PWO3-0011-R5A-SM-2IZIZ D1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R6A-SM-2I5F3 D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.675796 655654 0.930714 0.679222 0.76574 24251 1 76 0.00304852 103 0 6.0033e+07 0.0687052 3.75291e+06 8.83849e+07 1.93962e+07 24274 2.96573e+07 0 0.164974 0.679222 0.520108 6.0033e+07 0.010473 1.25223e+07 3.22742e+07 1.30071e+07 126 1.30867e+07 6.5744e+06 0.00674206 1.2685e+07 49.2206 0.0424609 0.682648 0 50.9494 GTEX-PWO3-0011-R6A-SM-2IZJ2 D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R8A-SM-2I5GD D1, A1 7.8 Brain Brain - Hypothalamus 0001898 1279 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.933551 1.07947e+06 0.934088 0.940879 0.776615 27246 1 76 0.0029608 273 0 1.19374e+08 0.065521 5.37552e+06 1.26874e+08 2.39472e+07 27288 5.90375e+07 0 0.157473 0.940879 0.730701 1.19374e+08 0.0100617 2.51374e+07 5.64312e+07 2.57279e+07 293 2.59858e+07 1.38337e+07 0.00648358 2.56638e+07 49.6882 0.0423688 0.948208 0 50.5805 GTEX-PWO3-0011-R8A-SM-2M49F D1, A1 7.8 Brain Brain - Hypothalamus 0001898 1279 BP-20392 RNA isolation_PAXgene Tissue miRNA 11/29/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-0011-R9A-SM-EVR2V D1, A1 5.5 Brain Brain - Spinal cord (cervical c-1) 0006469 1279 BP-20083 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.98495 203039 0.955316 0.986753 0.826935 22144 1 76 0.0021738 157 0 5.83386e+07 0.0444878 2.50602e+06 5.91217e+07 4.56514e+06 22157 2.90264e+07 0 0.128381 0.986753 0.815981 5.83386e+07 0.00345109 1.27378e+07 6.59253e+06 1.31092e+07 162 1.2874e+07 7.52418e+06 0.00281127 1.30709e+07 50.3795 0.0423874 0.988556 0 50.7183 GTEX-PWO3-0926-SM-2I5EY 1 D1 4 pieces, ~ 7x4mm 5.4 Brain Brain - Cortex 0001870 1374 1099 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.877439 379090 0.964704 0.882538 0.844083 23021 1 76 0.00299362 194 0 8.27788e+07 0.0350449 8.28678e+06 9.37964e+07 2.07232e+07 23033 4.10289e+07 0 0.120621 0.882538 0.744935 8.27788e+07 0.0104183 1.78927e+07 2.48948e+07 1.85743e+07 247 1.84574e+07 6.83436e+06 0.00668452 1.83163e+07 49.8082 0.0883486 0.887637 0 50.9346 GTEX-PWO3-0926-SM-2IZIY 1 D1 4 pieces, ~ 7x4mm 5.4 Brain Brain - Cortex 0001870 1374 1099 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-1026-SM-2I5F2 2 D1 4 ~6x5mm pieces, granular layer more autolyzed 6 Brain Brain - Cerebellum 0002037 1376 1099 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.826923 421915 0.941448 0.83572 0.72348 24746 1 76 0.00325503 152 0 8.88498e+07 0.0582429 2.99687e+06 1.06315e+08 2.0859e+07 24786 4.37596e+07 0 0.217969 0.83572 0.604627 8.88498e+07 0.0110346 1.87718e+07 2.22841e+07 1.91289e+07 179 1.93679e+07 8.55374e+06 0.00710388 1.93244e+07 49.9437 0.0281885 0.844518 0 50.4711 GTEX-PWO3-1026-SM-2IZJ1 2 D1 4 ~6x5mm pieces, granular layer more autolyzed 6 Brain Brain - Cerebellum 0002037 1376 1099 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWO3-1526-SM-48TCM 1 D1 6 ~8x1.5mm pieces. Squamous mucosa is 1.5-2% of thickness 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1290 1187 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.989831 252409 0.971315 0.991732 0.767023 22960 1 76 0.00187508 144 0 6.71477e+07 0.0284928 416503 6.77075e+07 3.68593e+06 22984 3.34212e+07 0 0.204292 0.991732 0.760681 6.71477e+07 0.00241398 1.47164e+07 8.93637e+06 1.47873e+07 156 1.48103e+07 1.0663e+07 0.00214401 1.48194e+07 50.0154 0.00615151 0.993633 0 50.12 GTEX-PWO3-1626-SM-2IZJM 1 D1 2 ~ 9x7mm aliquots, areas of poor/under-fixation centrally 5.1 Adipose Tissue Adipose - Subcutaneous 0002190 1301 1176 BP-19825 RNA isolation_PAXgene Tissue miRNA 11/01/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-0004-SM-2IJGC B1 Blood Whole Blood 0013756 -27 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101025_R01C01 GTEX-PWOO-0004-SM-2XK17 B1 Blood Whole Blood 0013756 -27 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R04C02 GTEX-PWOO-0004-SM-3UZFA B1 Blood Whole Blood 0013756 -27 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-PWOO-0004-SM-5JK4A B1 Blood Whole Blood 0013756 -27 BP-19509 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/20/2011 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-PWOO-0006-SM-2I3E3 B1 9.1 Blood Whole Blood 0013756 -27 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 EXCLUDE 0.780534 332037 0.960863 0.783766 0.817764 19052 1 76 0.0026344 112 0 6.27274e+07 0.0387325 294054 8.00333e+07 8.98152e+06 19064 3.11081e+07 0 0.143099 0.783766 0.640936 6.27274e+07 0.00440341 1.36213e+07 2.05772e+07 1.38627e+07 130 1.39716e+07 1.3044e+07 0.00351526 1.37587e+07 49.6162 0.00367414 0.786998 0 50.4392 GTEX-PWOO-0006-SM-2IZHS B1 9.1 Blood Whole Blood 0013756 -27 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-0008-SM-48TDU B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 235 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.992493 324162 0.973622 0.994224 0.846957 19547 1 76 0.00159815 127 0 5.21017e+07 0.0260127 170297 5.24043e+07 2.59832e+06 19559 2.59482e+07 0 0.126666 0.994224 0.842065 5.21017e+07 0.00211101 1.15804e+07 5.34865e+06 1.1661e+07 126 1.17208e+07 1.0591e+07 0.00185414 1.16051e+07 49.752 0.00324967 0.995955 0 50.1733 GTEX-PWOO-0326-SM-48TDB 1 B1 2 aliquots, ~ 9x3.5mm, cortex only, well preserved. One aliquot ~30% adherent fat on one edge 8.7 Adrenal Gland Adrenal Gland 0002369 96 1310 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.991385 303284 0.977396 0.993689 0.835714 22248 1 76 0.00182007 160 0 7.21907e+07 0.0222958 1.26588e+06 7.26492e+07 3.6859e+06 22266 3.59279e+07 0 0.141682 0.993689 0.83044 7.21907e+07 0.00250188 1.5912e+07 6.58363e+06 1.60012e+07 185 1.60416e+07 1.21714e+07 0.00216018 1.60234e+07 49.9716 0.0174245 0.995993 0 50.1398 GTEX-PWOO-0426-SM-48TZF 1 B1 2 aliquots, one ~3x2mm, one 1.6x0.6mm. Larger aliquot with sub-total atherosclerotic occlusion. 7.6 Blood Vessel Artery - Coronary 0001621 112 1304 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3084 04/18/2013 TruSeq.v1 EXCLUDE 0.990418 366499 0.970135 0.992511 0.82526 22878 1 76 0.00194651 275 0 8.49436e+07 0.0296103 474428 8.55845e+07 4.24681e+06 22898 4.23051e+07 0 0.144875 0.992511 0.81908 8.49436e+07 0.00264995 1.84058e+07 1.03212e+07 1.86503e+07 257 1.8621e+07 1.43535e+07 0.00229749 1.86058e+07 49.9795 0.00554338 0.994605 0 50.3298 GTEX-PWOO-0526-SM-2QU5E 1 B1 2 ~7x6mm aliquots. Contraction band ischemic changes noted; focal fat in one aliquot 8.3 Heart Heart - Left Ventricle 0006566 123 1293 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-0526-SM-2S1Q3 1 B1 2 ~7x6mm aliquots. Contraction band ischemic changes noted; focal fat in one aliquot 8.3 Heart Heart - Left Ventricle 0006566 123 1293 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.926904 113703 0.980579 0.932016 0.85869 20576 1 76 0.0025453 135 0 8.44964e+07 0.019228 2.94409e+06 9.06598e+07 6.63332e+06 20588 4.18804e+07 0 0.121889 0.932016 0.800313 8.44964e+07 0.0164034 1.84739e+07 1.09842e+07 1.90156e+07 172 1.89863e+07 1.19445e+07 0.00943636 1.88413e+07 49.8082 0.0324741 0.937128 0 50.7224 GTEX-PWOO-0626-SM-48TZH 1 B1 2 ~ 9x7mm pieces, remarkably well-preserved; good clean specimens. Minimal peri-pancreatic saponification 6.5 Pancreas Pancreas 0001150 171 1246 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3084 04/18/2013 TruSeq.v1 EXCLUDE 0.992114 256195 0.972665 0.993598 0.821116 22182 1 76 0.0020108 144 0 7.74268e+07 0.0271505 254422 7.79257e+07 3.44071e+06 22207 3.85858e+07 0 0.151549 0.993598 0.81586 7.74268e+07 0.00264544 1.75391e+07 1.21065e+07 1.76851e+07 155 1.77101e+07 1.76935e+07 0.00232765 1.76318e+07 49.8893 0.00326493 0.995083 0 50.2073 GTEX-PWOO-0726-SM-2I3EB 1 B1 2 ~11x5mm aliquots. Diffuse mild-moderate acute pneumonitis/edema 7.5 Lung Lung 0008952 174 1244 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 EXCLUDE 0.914668 139743 0.973767 0.917078 0.798987 23690 1 76 0.00274907 157 0 7.68135e+07 0.0259843 848641 8.37589e+07 8.9639e+06 23718 3.81837e+07 0 0.17478 0.917078 0.732734 7.68135e+07 0.00408732 1.68481e+07 1.00747e+07 1.72391e+07 195 1.72638e+07 1.18914e+07 0.00341644 1.70017e+07 49.6175 0.0101319 0.919488 0 50.5736 GTEX-PWOO-0726-SM-2IZI1 1 B1 2 ~11x5mm aliquots. Diffuse mild-moderate acute pneumonitis/edema 7.5 Lung Lung 0008952 174 1244 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-0826-SM-48TCL 1 B1 2 ~9X8mm aliquots, extensive patterned microvesicular steatosis ? drug/toxic effect 7.8 Liver Liver 0001114 178 1242 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.990518 266537 0.980607 0.992891 0.84448 19369 1 76 0.00161221 114 0 5.38321e+07 0.0188197 395243 5.42175e+07 2.59897e+06 19381 2.67768e+07 0 0.136127 0.992891 0.838476 5.38321e+07 0.00228375 1.19035e+07 6.77225e+06 1.19323e+07 133 1.19569e+07 1.03073e+07 0.00194718 1.19992e+07 50.0882 0.00728995 0.995263 0 50.0605 GTEX-PWOO-0926-SM-2I3EC 1 B1 1 13x9mm aliquot. Good clean specimen 6.6 Thyroid Thyroid 0002046 182 1239 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1167_3 04/02/2012 TruSeq.v1 EXCLUDE 0.703781 165613 0.959824 0.710428 0.740778 25185 1 76 0.0035347 156 0 8.6994e+07 0.0399607 1.43645e+06 1.22453e+08 2.83357e+07 25226 4.28994e+07 0 0.219046 0.710428 0.526269 8.6994e+07 0.0107238 1.87006e+07 1.28601e+07 1.89399e+07 179 1.92133e+07 9.99506e+06 0.00709559 1.91478e+07 49.9146 0.0117306 0.717075 0 50.318 GTEX-PWOO-0926-SM-2IZI2 1 B1 1 13x9mm aliquot. Good clean specimen 6.6 Thyroid Thyroid 0002046 182 1239 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-1026-SM-48TCN 1 B1 6 ~7x3.5mm pieces. Single 0.6mm focus of sub mucosa mucous/serous glands noted in one piece 7.8 Esophagus Esophagus - Muscularis 0004648 195 1227 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.991561 312395 0.974501 0.99363 0.828655 22129 1 76 0.00168243 165 0 7.13765e+07 0.0252486 500829 7.18341e+07 3.72088e+06 22145 3.55326e+07 0 0.145845 0.99363 0.823376 7.13765e+07 0.00228391 1.56515e+07 6.85289e+06 1.57422e+07 181 1.57505e+07 1.26623e+07 0.00198255 1.5784e+07 50.0531 0.00697203 0.995698 0 50.1444 GTEX-PWOO-1226-SM-48TCO 1 B1 6 ~7x3.5mm pieces. Mucosa overall well-preserved, focally with superficial moderate autolysis. Chronic gastritis (patchy). Mucosa ranges from ~30-60% of thickness. 6.3 Stomach Stomach 0000945 197 1226 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.990678 170732 0.977547 0.992226 0.833862 21952 1 76 0.00192369 224 0 6.40707e+07 0.0219604 1.0677e+06 6.45727e+07 3.25296e+06 21967 3.18916e+07 0 0.143685 0.992226 0.82738 6.40707e+07 0.00266679 1.45803e+07 3.03644e+07 1.46809e+07 174 1.47065e+07 1.39508e+07 0.00229466 1.46513e+07 49.9061 0.0165348 0.993775 0 50.1719 GTEX-PWOO-1326-SM-48TCJ 2 B1 6 ~ 8x3.75mm pieces; mucosa is ~ 5-10% of thickness 8.1 Colon Colon - Transverse 0001157 201 1223 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.989355 278418 0.973042 0.99167 0.809391 22845 1 76 0.00223357 175 0 6.95169e+07 0.0249158 671880 7.01009e+07 3.64455e+06 22874 3.4527e+07 0 0.163651 0.99167 0.802649 6.95169e+07 0.00297708 1.5536e+07 8.84439e+06 1.55686e+07 168 1.56235e+07 1.15095e+07 0.00260445 1.56274e+07 50.0063 0.00958447 0.993985 0 50.0525 GTEX-PWOO-1526-SM-48TCK 1 B1 2 ~10x4mm aliquots. 99% myometrium; rare focal glands, probably lower uterine segment/upper endocervix 8.1 Uterus Uterus 0000995 214 1211 BP-19857 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.993004 322287 0.975011 0.994411 0.820557 22362 1 76 0.00169398 158 0 7.10382e+07 0.0246819 158235 7.14375e+07 3.68595e+06 22381 3.53843e+07 0 0.154454 0.994411 0.815971 7.10382e+07 0.00231156 1.56219e+07 5.96691e+06 1.56756e+07 167 1.56839e+07 1.35455e+07 0.00200234 1.57152e+07 50.0499 0.00221501 0.995818 0 50.0857 GTEX-PWOO-1726-SM-48TDC 0 B1 2 ~9x5mm aliquots. No visible ova, involuted corpus luteum noted 8.5 Ovary Ovary 0000992 216 1211 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.992472 358876 0.973673 0.994082 0.810802 23161 1 76 0.00172397 160 0 7.56246e+07 0.0260476 180471 7.60748e+07 3.73134e+06 23187 3.76624e+07 0 0.162871 0.994082 0.806003 7.56246e+07 0.0024125 1.66109e+07 6.49965e+06 1.66918e+07 173 1.67171e+07 1.4765e+07 0.00206768 1.67047e+07 49.9814 0.00237228 0.995692 0 50.1215 GTEX-PWOO-2026-SM-48TDE 0 B1 6 ~6x2.5mm pieces; squamous mucosa is ~10 thickness/ r/o dysplasia on glass 7.1 Vagina Vagina 0000996 225 1205 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-3085 04/12/2013 TruSeq.v1 EXCLUDE 0.992783 176903 0.974483 0.994045 0.790415 22668 1 76 0.00181343 135 0 6.39344e+07 0.0253052 307658 6.43174e+07 3.37259e+06 22692 3.18562e+07 0 0.184068 0.994045 0.785709 6.39344e+07 0.00237753 1.42267e+07 6.69054e+06 1.42877e+07 146 1.42937e+07 1.12537e+07 0.00209512 1.43017e+07 50.014 0.00478343 0.995308 0 50.1069 GTEX-PWOO-2226-SM-2QU2S 1 B1 2 ~11x9mm aliquots. Large areas of central under-fixation with holes/tears 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 245 1187 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-2226-SM-2S1P1 1 B1 2 ~11x9mm aliquots. Large areas of central under-fixation with holes/tears 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 245 1187 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.847604 85119 0.973525 0.852796 0.815527 22318 1 76 0.00268118 115 0 6.75054e+07 0.0261696 324459 7.91577e+07 6.30575e+06 22339 3.34121e+07 0 0.157998 0.852796 0.695478 6.75054e+07 0.0162367 1.47635e+07 6.55149e+06 1.49607e+07 126 1.51886e+07 1.11922e+07 0.00941768 1.48967e+07 49.5148 0.00409889 0.857987 0 50.3317 GTEX-PWOO-2326-SM-2QU4C 0 B1 2 ~10x6mm aliquots, ~ 20% interstitial fat. Focal areas of scarring 7.8 Muscle Muscle - Skeletal 0011907 251 1182 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-2326-SM-2S1PQ 0 B1 2 ~10x6mm aliquots, ~ 20% interstitial fat. Focal areas of scarring 7.8 Muscle Muscle - Skeletal 0011907 251 1182 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.618126 79131 0.9736 0.624744 0.846988 18040 1 76 0.00243106 108 0 3.66438e+07 0.0261498 282165 5.86541e+07 5.08639e+06 18044 1.80436e+07 0 0.126612 0.624744 0.529151 3.66438e+07 0.0170703 7.76237e+06 4.98947e+06 8.00599e+06 109 8.15998e+06 6.79404e+06 0.00967313 7.94878e+06 49.3444 0.00481066 0.631362 0 50.7725 GTEX-PWOO-2426-SM-2IZJI 0 B1 2 ~ 1.5d aliquots, good clean specimens 8.4 Blood Vessel Artery - Tibial 0007610 254 1180 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-2426-SM-2S1OV 0 B1 2 ~ 1.5d aliquots, good clean specimens 8.4 Blood Vessel Artery - Tibial 0007610 254 1180 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.668615 40052 0.976281 0.672814 0.848847 19936 1 76 0.00248718 109 0 5.10838e+07 0.0232611 203889 7.59255e+07 1.02919e+07 19947 2.5274e+07 0 0.127434 0.672814 0.571117 5.10838e+07 0.0160175 1.09436e+07 3.80239e+06 1.12177e+07 116 1.13381e+07 1.01619e+07 0.00921012 1.11048e+07 49.4803 0.00268538 0.677013 0 50.6184 GTEX-PWOO-2526-SM-2QU3N 0 B1 2 ~ 5.5x3.5mm aliquots, clean specimens 6.6 Nerve Nerve - Tibial 0001323 255 1180 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PWOO-2526-SM-2S1PG 0 B1 2 ~ 5.5x3.5mm aliquots, clean specimens 6.6 Nerve Nerve - Tibial 0001323 255 1180 BP-19856 RNA isolation_PAXgene Tissue miRNA 11/02/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.744661 58832 0.967859 0.749595 0.743107 23176 1 76 0.00275889 110 0 6.41549e+07 0.0319055 220246 8.55862e+07 1.17592e+07 23204 3.17493e+07 0 0.224753 0.749595 0.557029 6.41549e+07 0.0166108 1.39632e+07 5.7184e+06 1.41156e+07 110 1.43296e+07 9.03297e+06 0.00963924 1.41198e+07 49.6313 0.00257338 0.754529 0 50.2714 GTEX-PX3G-0004-SM-2IJGE B1 Blood Whole Blood 0013756 -32 BP-19591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/24/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101025_R02C01 GTEX-PX3G-0004-SM-2XK13 B1 Blood Whole Blood 0013756 -32 BP-19591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/24/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R02C01 GTEX-PX3G-0004-SM-4X612 B1 Blood Whole Blood 0013756 -32 BP-19591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/24/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-PX3G-0004-SM-5JK53 B1 Blood Whole Blood 0013756 -32 BP-19591 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/24/2011 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-PX3G-0006-SM-2I3E4 B1 9.8 Blood Whole Blood 0013756 -32 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.344038 422670 0.953931 0.379885 0.760408 20312 1 76 0.00406587 93 0 6.99334e+07 0.045183 184576 1.84091e+08 6.69668e+07 20321 3.15439e+07 0 0.193523 0.379885 0.288867 6.99334e+07 0.102952 1.38804e+07 6.01015e+07 1.43168e+07 110 1.7247e+07 1.39446e+07 0.0488432 1.68416e+07 49.4053 0.00100263 0.415732 0 50.7739 GTEX-PX3G-0006-SM-2IZHT B1 9.8 Blood Whole Blood 0013756 -32 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-0006-SM-33HBQ B1 9.8 Blood Whole Blood 0013756 -32 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.528443 255045 0.963686 0.534045 0.780341 20923 1 76 0.002529 108 0 5.69229e+07 0.0357212 175345 1.06588e+08 1.24676e+07 20935 2.79338e+07 0 0.183345 0.534045 0.416737 5.69229e+07 0.00868275 1.25484e+07 3.43369e+07 1.27181e+07 114 1.29909e+07 1.16098e+07 0.0055736 1.28537e+07 49.7345 0.00164507 0.539646 0 50.3357 GTEX-PX3G-0006-SM-5SI7E B1 9.8 Blood Whole Blood 0013756 -32 BP-19557 RNA isolation_PAXgene Blood RNA (Manual) 10/22/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.986009 695246 0.960983 0.988395 0.778984 20551 1 76 0.00216974 153 0 9.18505e+07 0.0381074 186199 9.29289e+07 8.77013e+06 20571 4.56921e+07 0 0.181999 0.988395 0.769944 9.18505e+07 0.0035136 2.05103e+07 7.60299e+07 2.06734e+07 174 2.07232e+07 1.99316e+07 0.00284005 2.06936e+07 49.9643 0.00200367 0.990781 0 50.198 GTEX-PX3G-0008-SM-48U2L B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.994103 617682 0.977648 0.995456 0.887609 19590 1 76 0.00156141 219 0 8.25893e+07 0.022034 141821 8.29663e+07 3.81262e+06 19601 4.11622e+07 0 0.0900387 0.995456 0.883575 8.25893e+07 0.00215981 1.8445e+07 1.31445e+07 1.85784e+07 218 1.8651e+07 2.19259e+07 0.0018602 1.84881e+07 49.7807 0.00170938 0.996809 0 50.1801 GTEX-PX3G-0126-SM-2I3EN 1 B1 6 pieces, up to 7.5x2.5 mm; scattered dermal fractures 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 247 373 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.939166 185523 0.96587 0.942652 0.805091 22534 1 76 0.00305355 197 0 7.28413e+07 0.0337281 453621 7.72728e+07 7.52653e+06 22561 3.61405e+07 0 0.160779 0.942652 0.758921 7.28413e+07 0.00419909 1.56781e+07 1.31352e+07 1.57986e+07 169 1.58871e+07 1.23878e+07 0.00362421 1.58315e+07 49.9123 0.00587039 0.946138 0 50.1915 GTEX-PX3G-0126-SM-2IZIC 1 B1 6 pieces, up to 7.5x2.5 mm; scattered dermal fractures 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 247 373 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-0226-SM-2S1OU 0 B1 3 pieces, up to 10x7 mm; some central defects 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 242 378 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.783502 142036 0.965729 0.788086 0.756829 23169 1 76 0.00279076 112 0 6.28993e+07 0.0339872 336586 7.98128e+07 6.62412e+06 23193 3.1116e+07 0 0.208899 0.788086 0.596447 6.28993e+07 0.0164662 1.36784e+07 8.6239e+06 1.38922e+07 117 1.40416e+07 9.39772e+06 0.00958872 1.38476e+07 49.6522 0.00421719 0.79267 0 50.3878 GTEX-PX3G-0226-SM-3NB2C 0 B1 3 pieces, up to 10x7 mm; some central defects 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 242 378 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-2318 12/16/2012 TruSeq.v1 EXCLUDE 0.982164 324956 0.968678 0.986995 0.765789 24721 1 76 0.00408674 195 0 9.27418e+07 0.0310258 521868 9.39637e+07 1.64674e+07 24757 4.59748e+07 0 0.202889 0.986995 0.75583 9.27418e+07 0.00598806 2.02686e+07 1.12373e+07 2.04169e+07 205 2.05222e+07 1.42054e+07 0.00503275 2.05897e+07 50.0821 0.00555393 0.991826 0 50.1823 GTEX-PX3G-0226-SM-DKPOF 0 B1 3 pieces, up to 10x7 mm; some central defects 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 242 378 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.991429 323367 0.970944 0.993729 0.773574 24750 1 76 0.00272377 282 0 1.08844e+08 0.0287326 586740 1.09531e+08 1.00019e+07 24799 5.41863e+07 0 0.197369 0.993729 0.768723 1.08844e+08 0.0034717 2.38895e+07 1.1059e+07 2.40424e+07 327 2.40983e+07 1.75461e+07 0.00309687 2.40665e+07 49.967 0.00535682 0.996029 0 50.1595 GTEX-PX3G-0326-SM-2I3EO 1 B1 2 pieces, about 9mm squared; a 2 mm coronary artery is at 1 edge embedded in <5% fat 8.7 Heart Heart - Left Ventricle 0006566 119 501 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.924508 122149 0.982405 0.930934 0.848518 21072 1 76 0.00233875 265 0 8.24195e+07 0.0173255 2.41422e+06 8.85342e+07 9.91657e+06 21088 4.07956e+07 0 0.133887 0.930934 0.789915 8.24195e+07 0.00380029 1.7687e+07 1.59323e+07 1.82639e+07 271 1.82469e+07 1.30505e+07 0.00306448 1.81522e+07 49.87 0.0272687 0.93736 0 50.8023 GTEX-PX3G-0326-SM-2IZID 1 B1 2 pieces, about 9mm squared; a 2 mm coronary artery is at 1 edge embedded in <5% fat 8.7 Heart Heart - Left Ventricle 0006566 119 501 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-0426-SM-48U1C 0 B1 6 pieces, ~9x1.5 mm 8.7 Blood Vessel Artery - Aorta 0001496 123 497 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99298 212634 0.972392 0.99432 0.81668 22530 1 76 0.00191406 140 0 6.63237e+07 0.0271996 148610 6.67026e+07 3.02208e+06 22557 3.30489e+07 0 0.155712 0.99432 0.812041 6.63237e+07 0.00257864 1.43312e+07 5.21046e+06 1.44368e+07 152 1.44659e+07 1.2569e+07 0.0022459 1.43874e+07 49.8639 0.00222795 0.99566 0 50.1835 GTEX-PX3G-0526-SM-2I3EM 1 B1 2 pieces, up to 12x6 mm 7.9 Lung Lung 0008952 109 511 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.931533 130973 0.973295 0.935249 0.808955 24872 1 76 0.0026433 203 0 8.52091e+07 0.0263293 518871 9.11085e+07 9.73272e+06 24900 4.23026e+07 0 0.16434 0.935249 0.756575 8.52091e+07 0.00404187 1.87229e+07 8.92765e+06 1.91438e+07 240 1.92392e+07 1.49605e+07 0.0033398 1.89338e+07 49.6 0.00569509 0.938966 0 50.5557 GTEX-PX3G-0526-SM-2IZIB 1 B1 2 pieces, up to 12x6 mm 7.9 Lung Lung 0008952 109 511 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-0626-SM-EZ6LW 1 B1 6 pieces, ~6x2 mm, 3 have glandular mucosa in part or total; one shows intestinal metaplasia; several, squamous hyperplasia of reflux type 5.7 Esophagus Esophagus - Mucosa 0006920 149 471 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.987824 141713 0.974617 0.989361 0.795573 23889 1 76 0.00239845 297 0 8.64284e+07 0.0251672 1.15926e+06 8.73578e+07 6.82257e+06 23919 4.3079e+07 0 0.179044 0.989361 0.787109 8.64284e+07 0.00338663 1.94398e+07 2.80455e+07 1.95928e+07 269 1.95637e+07 1.52958e+07 0.00289177 1.95847e+07 50.0269 0.0132703 0.990897 0 50.1959 GTEX-PX3G-0726-SM-48TZT 1 B1 6 pieces, up to ~9x3 mm; 1 has small <1mm of squamous mucosa 8.5 Esophagus Esophagus - Muscularis 0004648 151 469 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992569 252516 0.974064 0.993956 0.832515 22618 1 76 0.00188546 209 0 8.13417e+07 0.0256238 644523 8.18363e+07 3.83943e+06 22639 4.05372e+07 0 0.141549 0.993956 0.827483 8.13417e+07 0.00252152 1.7441e+07 7.55108e+06 1.75929e+07 245 1.75591e+07 1.43899e+07 0.00220305 1.75776e+07 50.0263 0.00787575 0.995343 0 50.2168 GTEX-PX3G-0826-SM-48TZS 1 B1 2 pieces,~ 6x8 mm; central sinusoidal dilatation; focal fragmentation 7.5 Liver Liver 0001114 222 398 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99171 197245 0.979257 0.993865 0.856285 20382 1 76 0.00202768 127 0 6.66813e+07 0.0194802 642783 6.70929e+07 3.19155e+06 20391 3.31701e+07 0 0.122972 0.993865 0.851032 6.66813e+07 0.00279923 1.43825e+07 9.15129e+06 1.43754e+07 154 1.44211e+07 1.38132e+07 0.00241262 1.44692e+07 50.0832 0.00958049 0.996021 0 49.9876 GTEX-PX3G-0926-SM-48U12 1 B1 2 pieces, ~6 mm cubed; moderate congestion 7.8 Spleen Spleen 0002106 105 515 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.987374 282236 0.962973 0.989539 0.785731 23512 1 76 0.0032695 152 0 7.41465e+07 0.0319842 325296 7.49303e+07 3.80015e+06 23536 3.67253e+07 0 0.177242 0.989539 0.777511 7.41465e+07 0.00400786 1.64634e+07 1.8335e+07 1.65805e+07 166 1.66557e+07 1.12621e+07 0.00363787 1.65423e+07 49.8292 0.00434131 0.991703 0 50.1771 GTEX-PX3G-1026-SM-48TZW 1 B1 2 pieces, 7x7 & 10x4 mm; very good exo and endocrine glands and ducts; <5% fat; 7 Pancreas Pancreas 0001150 170 450 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990326 220805 0.979769 0.992376 0.853371 21317 1 76 0.00206923 95 0 6.88705e+07 0.0198035 143000 6.93996e+07 3.5069e+06 21334 3.429e+07 0 0.126398 0.992376 0.846865 6.88705e+07 0.00274635 1.58254e+07 2.09635e+07 1.60503e+07 110 1.60351e+07 2.10806e+07 0.00240709 1.59781e+07 49.911 0.00206053 0.994426 0 50.3527 GTEX-PX3G-1326-SM-48U18 1 B1 2 pieces, ~7x2 mm; ~10% adipose; very small medulla 9 Adrenal Gland Adrenal Gland 0002369 102 518 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992429 228553 0.974378 0.994 0.819362 22998 1 76 0.0021334 128 0 6.50537e+07 0.024976 775174 6.54464e+07 3.18603e+06 23022 3.23986e+07 0 0.155017 0.994 0.814445 6.50537e+07 0.00281684 1.44e+07 6.77221e+06 1.45122e+07 162 1.454e+07 1.04592e+07 0.00247458 1.44629e+07 49.8671 0.0118444 0.995571 0 50.194 GTEX-PX3G-1426-SM-48U1J 1 B1 6 pieces, ~6x4 mm; only 2 have abundant mucosa 8.3 Colon Colon - Transverse 0001157 164 456 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990585 200413 0.972314 0.992298 0.811687 23344 1 76 0.00237238 139 0 6.37915e+07 0.0258759 638646 6.42866e+07 3.03361e+06 23363 3.17225e+07 0 0.160627 0.992298 0.805435 6.37915e+07 0.00310521 1.40213e+07 7.46411e+06 1.41617e+07 155 1.41739e+07 1.00823e+07 0.00273816 1.41061e+07 49.8801 0.00993436 0.994011 0 50.2492 GTEX-PX3G-1526-SM-48U11 1 B1 6 pieces, ~10x4 mm; very good and abundant mucosa up to 1 mm thick 6.7 Stomach Stomach 0000945 158 462 BP-19882 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.975006 150571 0.986456 0.977353 0.878767 20887 1 76 0.00157296 331 0 7.78279e+07 0.0131768 477286 7.96313e+07 3.91824e+06 20899 3.87379e+07 0 0.107689 0.977353 0.858866 7.78279e+07 0.00229881 1.82214e+07 1.2141e+08 1.85221e+07 234 1.85923e+07 2.46723e+07 0.00193502 1.83317e+07 49.6472 0.0059937 0.9797 0 50.4092 GTEX-PX3G-1626-SM-2QU4K 1 B1 2 pieces, ~8.5x5 mm; focal fragmentation 8.7 Muscle Muscle - Skeletal 0011907 255 365 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-1626-SM-2S1PT 1 B1 2 pieces, ~8.5x5 mm; focal fragmentation 8.7 Muscle Muscle - Skeletal 0011907 255 365 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.502825 201575 0.954556 0.506483 0.815515 18893 1 76 0.00229016 95 0 4.28822e+07 0.0449021 410709 8.46666e+07 7.10801e+06 18901 2.11845e+07 0 0.139041 0.506483 0.413044 4.28822e+07 0.0169633 8.70926e+06 1.381e+07 9.09584e+06 104 9.21552e+06 8.05994e+06 0.00957377 8.85577e+06 49.0047 0.0048509 0.51014 0 51.0856 GTEX-PX3G-1826-SM-2QU3P 1 B1 2 pieces, 5.5x2 mm 2 veins and 1 artery& 3x2 mm 2 arteries & 1 vein; up to 30% adipose 7.3 Blood Vessel Artery - Tibial 0007610 260 360 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-1826-SM-2S1PK 1 B1 2 pieces, 5.5x2 mm 2 veins and 1 artery& 3x2 mm 2 arteries & 1 vein; up to 30% adipose 7.3 Blood Vessel Artery - Tibial 0007610 260 360 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.75883 112059 0.971813 0.763263 0.826733 21779 1 76 0.00246294 108 0 5.92601e+07 0.0278969 486525 7.76406e+07 5.86134e+06 21795 2.935e+07 0 0.14508 0.763263 0.631015 5.92601e+07 0.0163344 1.26247e+07 6.84708e+06 1.29114e+07 113 1.30304e+07 1.05883e+07 0.00935838 1.27976e+07 49.5492 0.00626638 0.767695 0 50.5612 GTEX-PX3G-2026-SM-48U1H 1 B1 2 pieces; only one, 8.7x3.8 mm, has endometrium, 0.8x1.8mm; other all muscle 8.3 Uterus Uterus 0000995 199 421 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991668 301945 0.970519 0.993463 0.809049 23881 1 76 0.00194193 275 0 9.02303e+07 0.0291402 191973 9.08241e+07 4.4671e+06 23910 4.49426e+07 0 0.16147 0.993463 0.80376 9.02303e+07 0.00258609 1.97605e+07 8.45835e+06 1.99212e+07 266 1.99675e+07 1.61932e+07 0.00226343 1.98695e+07 49.877 0.00211368 0.995258 0 50.2025 GTEX-PX3G-2426-SM-48TZZ 0 B1 2 pieces, 15x2mm & 11x3 mm; ova and corpora 8.3 Ovary Ovary 0000992 185 435 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99059 245321 0.966895 0.992996 0.767717 23002 1 76 0.00191457 144 0 6.94725e+07 0.0328167 120333 6.99626e+07 3.48787e+06 23041 3.45832e+07 0 0.199177 0.992996 0.76234 6.94725e+07 0.00257663 1.51826e+07 7.91389e+06 1.5308e+07 150 1.53795e+07 1.31055e+07 0.0022448 1.52732e+07 49.8265 0.00171996 0.995401 0 50.2057 GTEX-PX3G-2526-SM-48TZV 1 B1 6 pieces, up to 11x4 mm 8.3 Vagina Vagina 0000996 206 414 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99188 234971 0.971676 0.993622 0.781096 24364 1 76 0.00207189 141 0 7.28163e+07 0.0280143 174372 7.32837e+07 3.63201e+06 24394 3.62708e+07 0 0.19058 0.993622 0.776114 7.28163e+07 0.00266832 1.61018e+07 7.44063e+06 1.62016e+07 165 1.62554e+07 1.29274e+07 0.00236958 1.61689e+07 49.8666 0.00237941 0.995364 0 50.1544 GTEX-PX3G-2626-SM-2I3EG 1 B1 2 pieces, 6.6x8.8 mm & ~6mm 7.5 Thyroid Thyroid 0002046 131 489 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 RNASEQ 0.701037 314920 0.95497 0.706361 0.704467 25860 1 76 0.0036249 131 0 9.42727e+07 0.0447565 351996 1.33462e+08 4.67033e+07 25912 4.66148e+07 0 0.250503 0.706361 0.497608 9.42727e+07 0.0107528 2.01913e+07 1.82612e+07 2.05076e+07 159 2.0795e+07 1.38996e+07 0.00716197 2.05472e+07 49.7003 0.00263742 0.711685 0 50.3885 GTEX-PX3G-2626-SM-2IZI6 1 B1 2 pieces, 6.6x8.8 mm & ~6mm 7.5 Thyroid Thyroid 0002046 131 489 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-PX3G-3026-SM-48TZR 1 B1 2 pieces, 2.8mm diameter; 30% atherosclerotic plaque & 30% adipose in one; 20% plaque & <5% adipose in other 6.6 Blood Vessel Artery - Coronary 0001621 116 504 BP-19883 RNA isolation_PAXgene Tissue miRNA 11/03/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989601 185419 0.966459 0.99146 0.757715 23994 1 76 0.00205784 131 0 6.93756e+07 0.0332925 366431 6.99732e+07 3.34107e+06 24026 3.45432e+07 0 0.208744 0.99146 0.751244 6.93756e+07 0.00274933 1.50825e+07 6.54455e+06 1.51593e+07 163 1.51693e+07 9.70821e+06 0.00240294 1.51945e+07 50.0415 0.00523673 0.99332 0 50.127 GTEX-Q2AG-0003-SM-2IJGG C1 Blood Whole Blood 0013756 611 BP-19641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101025_R03C01 GTEX-Q2AG-0003-SM-2XK18 C1 Blood Whole Blood 0013756 611 BP-19641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R06C01 GTEX-Q2AG-0003-SM-4X61P C1 Blood Whole Blood 0013756 611 BP-19641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-Q2AG-0003-SM-5JK4S C1 Blood Whole Blood 0013756 611 BP-19641 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/25/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-Q2AG-0005-SM-2HMK3 C1 7.4 Blood Whole Blood 0013756 611 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.185431 116079 0.973068 0.205265 0.787482 17919 1 76 0.00645881 91 0 4.17097e+07 0.0241845 231405 2.03199e+08 1.41806e+08 17922 1.85805e+07 0 0.185587 0.205265 0.161643 4.17097e+07 0.0708633 8.57713e+06 6.24554e+07 8.88248e+06 111 1.06611e+07 9.30212e+06 0.0355494 1.04915e+07 49.599 0.00113881 0.2251 0 50.8745 GTEX-Q2AG-0005-SM-2IZK2 C1 7.4 Blood Whole Blood 0013756 611 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0005-SM-33HBX C1 7.4 Blood Whole Blood 0013756 611 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.321791 184020 0.968964 0.325029 0.786625 18171 1 76 0.00250355 106 0 3.71382e+07 0.0291649 200416 1.14261e+08 1.52739e+07 18176 1.80946e+07 0 0.182338 0.325029 0.255676 3.71382e+07 0.00960336 8.3453e+06 4.52539e+07 8.61474e+06 120 8.72187e+06 8.64818e+06 0.00601809 8.60836e+06 49.6725 0.00175402 0.328268 0 50.7944 GTEX-Q2AG-0005-SM-5SI7F C1 7.4 Blood Whole Blood 0013756 611 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.982808 436430 0.975103 0.985594 0.798841 18832 1 76 0.00210305 120 0 8.08965e+07 0.0241497 388581 8.20789e+07 8.25415e+06 18838 4.02151e+07 0 0.176261 0.985594 0.787333 8.08965e+07 0.00370629 1.85846e+07 9.61594e+07 1.87083e+07 145 1.87104e+07 1.87099e+07 0.0029024 1.88236e+07 50.1509 0.00473424 0.988379 0 50.1659 GTEX-Q2AG-0008-SM-48U2K C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 696 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99383 255278 0.975682 0.995146 0.875154 20699 1 76 0.00205275 210 0 7.37389e+07 0.0241149 299413 7.40986e+07 3.35097e+06 20712 3.67605e+07 0 0.100528 0.995146 0.870906 7.37389e+07 0.00260801 1.62577e+07 8.48434e+06 1.64562e+07 226 1.64454e+07 1.39229e+07 0.00233001 1.63622e+07 49.8732 0.00404074 0.996462 0 50.3034 GTEX-Q2AG-0011-R10A-SM-2HMLA C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.84661 236953 0.965314 0.853515 0.841473 24593 1 76 0.00251558 268 0 9.42548e+07 0.0339303 2.48881e+06 1.10431e+08 1.62513e+07 24617 4.6522e+07 0 0.12384 0.853515 0.71821 9.42548e+07 0.00931456 2.05926e+07 1.09951e+07 2.07284e+07 284 2.10602e+07 1.40723e+07 0.00588757 2.09268e+07 49.8411 0.0225371 0.860421 0 50.1642 GTEX-Q2AG-0011-R10A-SM-2IZK9 C1, A1 8.5 Brain Brain - Frontal Cortex (BA9) 0009834 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R11A-SM-2HMKZ C1, A1 9.5 Brain Brain - Cerebellar Hemisphere 0002037 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.79676 283825 0.947492 0.804448 0.727182 24028 1 76 0.00282454 124 0 7.58857e+07 0.05187 755537 9.43326e+07 1.39068e+07 24077 3.73771e+07 0 0.22031 0.804448 0.58498 7.58857e+07 0.00964115 1.6211e+07 1.00172e+07 1.64029e+07 145 1.67024e+07 1.07109e+07 0.00620027 1.65613e+07 49.7879 0.00800928 0.812136 0 50.2942 GTEX-Q2AG-0011-R11A-SM-2IZK6 C1, A1 9.5 Brain Brain - Cerebellar Hemisphere 0002037 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R1A-SM-2HMJI C1, A1 8.3 Brain Brain - Hippocampus 0001954 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.921 259627 0.96364 0.927627 0.846143 24256 1 76 0.00247068 272 0 9.17318e+07 0.0358629 3.6869e+06 9.88886e+07 1.31469e+07 24280 4.53831e+07 0 0.117497 0.927627 0.784906 9.17318e+07 0.00879117 2.00051e+07 1.28055e+07 2.03592e+07 287 2.06099e+07 1.23572e+07 0.00560834 2.03363e+07 49.6659 0.0372834 0.934255 0 50.4386 GTEX-Q2AG-0011-R1A-SM-2IZJV C1, A1 8.3 Brain Brain - Hippocampus 0001954 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R2A-SM-2HMIT C1, A1 8.1 Brain Brain - Substantia nigra 0002038 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.968436 266261 0.961454 0.97757 0.828079 24841 1 76 0.00241619 292 0 1.05943e+08 0.0380853 3.93479e+06 1.08373e+08 1.30001e+07 24872 5.23057e+07 0 0.133375 0.97757 0.809505 1.05943e+08 0.00844627 2.30885e+07 1.3215e+07 2.36066e+07 297 2.39386e+07 1.51177e+07 0.00540306 2.36538e+07 49.7008 0.0363076 0.986703 0 50.5547 GTEX-Q2AG-0011-R2A-SM-2IZKB C1, A1 8.1 Brain Brain - Substantia nigra 0002038 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R3A-SM-2HMJ9 C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.705204 159007 0.963796 0.708929 0.846625 23393 1 76 0.00245677 147 0 6.93549e+07 0.0355782 2.33547e+06 9.78305e+07 1.38885e+07 23407 3.42929e+07 0 0.117171 0.708929 0.600198 6.93549e+07 0.00931095 1.50305e+07 8.70944e+06 1.54861e+07 168 1.55964e+07 9.81191e+06 0.00586585 1.52359e+07 49.4153 0.0238726 0.712655 0 50.7463 GTEX-Q2AG-0011-R3A-SM-2IZJT C1, A1 7.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R4A-SM-2HMKA C1, A1 7.7 Brain Brain - Amygdala 0001876 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.906386 143831 0.967648 0.911002 0.848819 24335 1 76 0.00244826 270 0 9.21378e+07 0.0318676 4.674e+06 1.01139e+08 1.35312e+07 24359 4.5669e+07 0 0.118829 0.911002 0.773276 9.21378e+07 0.00883585 2.00822e+07 9.75294e+06 2.05803e+07 301 2.07053e+07 1.21873e+07 0.00562587 2.03529e+07 49.5709 0.0462137 0.915619 0 50.6125 GTEX-Q2AG-0011-R4A-SM-2IZK4 C1, A1 7.7 Brain Brain - Amygdala 0001876 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R5A-SM-2HMJH C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.955408 282259 0.96357 0.962792 0.835242 25490 1 76 0.00252977 270 0 1.10555e+08 0.0359346 5.05337e+06 1.14828e+08 1.56613e+07 25522 5.46723e+07 0 0.128329 0.962792 0.804164 1.10555e+08 0.00892568 2.38561e+07 1.70171e+07 2.44982e+07 294 2.48613e+07 1.46319e+07 0.0057032 2.42187e+07 49.3453 0.0440082 0.970177 0 50.664 GTEX-Q2AG-0011-R5A-SM-2IZJU C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R6A-SM-2HML7 C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.921711 304394 0.963295 0.932761 0.837125 25089 1 76 0.0024908 271 0 1.08997e+08 0.0362051 5.08337e+06 1.16854e+08 1.6589e+07 25114 5.36463e+07 0 0.126169 0.932761 0.780838 1.08997e+08 0.00884295 2.34437e+07 1.58508e+07 2.40988e+07 292 2.46374e+07 1.43386e+07 0.00562925 2.40411e+07 49.3875 0.0435017 0.94381 0 50.6889 GTEX-Q2AG-0011-R6A-SM-2IZK8 C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R7A-SM-2HMJP C1, A1 8.8 Brain Brain - Putamen (basal ganglia) 0001874 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.863386 324662 0.95995 0.870972 0.815263 24162 1 76 0.00247046 268 0 9.11238e+07 0.0397448 5.72736e+06 1.04623e+08 1.53381e+07 24183 4.49929e+07 0 0.144687 0.870972 0.710072 9.11238e+07 0.00910314 1.92888e+07 2.51584e+07 2.0217e+07 293 2.03851e+07 9.04553e+06 0.00575791 1.97446e+07 49.2019 0.0547429 0.878559 0 51.1747 GTEX-Q2AG-0011-R7A-SM-2IZKA C1, A1 8.8 Brain Brain - Putamen (basal ganglia) 0001874 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R8A-SM-2HMK5 C1, A1 6.5 Brain Brain - Hypothalamus 0001898 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.79103 176578 0.966901 0.797521 0.848587 23671 1 76 0.00243664 202 0 7.73929e+07 0.032805 5.90423e+06 9.70418e+07 1.46513e+07 23689 3.82191e+07 0 0.118314 0.797521 0.676766 7.73929e+07 0.00913581 1.68293e+07 1.29256e+07 1.74069e+07 255 1.76109e+07 8.11614e+06 0.00575896 1.71445e+07 49.3291 0.0608421 0.804012 0 50.8436 GTEX-Q2AG-0011-R8A-SM-2IZK3 C1, A1 6.5 Brain Brain - Hypothalamus 0001898 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0011-R9A-SM-2HMJ6 C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.714192 235471 0.957823 0.718836 0.846611 20947 1 76 0.00236603 183 0 6.13384e+07 0.0418599 4.29638e+06 8.53301e+07 1.32672e+07 20961 3.03287e+07 0 0.111211 0.718836 0.608575 6.13384e+07 0.00905618 1.33028e+07 1.6076e+07 1.3904e+07 167 1.39242e+07 5.89621e+06 0.00568949 1.36046e+07 49.4195 0.0503502 0.723481 0 51.105 GTEX-Q2AG-0011-R9A-SM-2IZJS C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 615 BP-20085 RNA isolation_PAXgene Tissue miRNA 11/14/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0126-SM-2HMLB 1 C1 6 ~8x2.5mm pieces. Squamous epithelium is ~1--2% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 696 1171 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.202102 53002 0.968689 0.226036 0.789713 23060 1 76 0.00658319 127 0 5.02984e+07 0.0307837 298611 2.22524e+08 1.51071e+08 23077 2.23129e+07 0 0.178976 0.226036 0.178503 5.02984e+07 0.0730188 9.70042e+06 9.36331e+06 9.97896e+06 109 1.23122e+07 7.81357e+06 0.0362837 1.20433e+07 49.4479 0.00134193 0.24997 0 50.7077 GTEX-Q2AG-0126-SM-2IZJX 1 C1 6 ~8x2.5mm pieces. Squamous epithelium is ~1--2% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 696 1171 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0126-SM-33HBV 1 C1 6 ~8x2.5mm pieces. Squamous epithelium is ~1--2% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 696 1171 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.95612 354473 0.968494 0.959013 0.779789 26905 1 76 0.00230343 539 0 1.54937e+08 0.0312667 769699 1.61558e+08 1.66594e+07 26966 7.69517e+07 0 0.188705 0.959013 0.747828 1.54937e+08 0.00617829 3.35817e+07 1.73583e+07 3.40294e+07 480 3.40568e+07 2.36247e+07 0.00423502 3.4002e+07 49.9598 0.00476422 0.961906 0 50.3311 GTEX-Q2AG-0226-SM-2QU2T 1 C1 2 ~9x6mm aliquots, fragmented 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 700 1168 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0226-SM-2S1P4 1 C1 2 ~9x6mm aliquots, fragmented 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 700 1168 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.422851 60684 0.966512 0.429078 0.806194 19281 1 76 0.00267508 103 0 2.30547e+07 0.0329987 149841 5.37308e+07 6.43591e+06 19287 1.12887e+07 0 0.160318 0.429078 0.34592 2.30547e+07 0.0179882 4.90454e+06 3.5096e+06 5.06312e+06 113 5.22062e+06 3.46467e+06 0.0102205 5.04942e+06 49.1665 0.00278874 0.435305 0 50.7954 GTEX-Q2AG-0326-SM-48U1O 1 C1 2 ~9x7mm aliquots, ~ 70% ductal/lobular units, good specimen 6.6 Breast Breast - Mammary Tissue 0008367 714 1155 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990629 173499 0.970374 0.992076 0.737831 24331 1 76 0.00205919 132 0 6.59313e+07 0.0292912 247431 6.6458e+07 3.07779e+06 24365 3.28442e+07 0 0.232542 0.992076 0.731985 6.59313e+07 0.0027359 1.45598e+07 6.41521e+06 1.45702e+07 144 1.45979e+07 1.00072e+07 0.00239705 1.46237e+07 50.0441 0.00372312 0.993524 0 50.0179 GTEX-Q2AG-0426-SM-2QU4J 1 C1 2 ~7x6.5mm aliquots, ~20% interspersed fat 8.1 Muscle Muscle - Skeletal 0011907 718 1151 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0426-SM-2S1PU 1 C1 2 ~7x6.5mm aliquots, ~20% interspersed fat 8.1 Muscle Muscle - Skeletal 0011907 718 1151 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.626938 113659 0.963518 0.635533 0.836128 17657 1 76 0.00243553 94 0 2.90296e+07 0.0362767 253566 4.56776e+07 4.72377e+06 17660 1.42535e+07 0 0.127389 0.635533 0.531387 2.90296e+07 0.0179764 6.02911e+06 6.66418e+06 6.23498e+06 112 6.40733e+06 5.28361e+06 0.0101009 6.20055e+06 49.1799 0.00555121 0.644128 0 50.8393 GTEX-Q2AG-0526-SM-2QU4W 1 C1 2 ~2mm d aliquots, clean specimens 8.4 Blood Vessel Artery - Tibial 0007610 729 1142 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0526-SM-2S1PW 1 C1 2 ~2mm d aliquots, clean specimens 8.4 Blood Vessel Artery - Tibial 0007610 729 1142 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.894032 99155 0.976107 0.899562 0.828067 21569 1 76 0.00257531 132 0 9.14366e+07 0.0235307 224869 1.01646e+08 7.48411e+06 21582 4.52781e+07 0 0.14804 0.899562 0.744897 9.14366e+07 0.0166407 1.97567e+07 7.20719e+06 2.01033e+07 158 2.0338e+07 1.74716e+07 0.00956477 2.00129e+07 49.5972 0.00221228 0.905091 0 50.4348 GTEX-Q2AG-0626-SM-2QU4M 2 C1 2 ~6x4.5mm aliquots, both with ~6mm rim of fat. 6.3 Nerve Nerve - Tibial 0001323 731 1141 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0626-SM-2S1PV 2 C1 2 ~6x4.5mm aliquots, both with ~6mm rim of fat. 6.3 Nerve Nerve - Tibial 0001323 731 1141 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.751296 114955 0.967502 0.756584 0.740661 23856 1 76 0.00270093 111 0 7.02002e+07 0.032273 169698 9.27857e+07 7.84739e+06 23895 3.46863e+07 0 0.226841 0.756584 0.560373 7.02002e+07 0.0172032 1.52995e+07 7.67278e+06 1.5507e+07 120 1.5721e+07 1.04346e+07 0.00990139 1.55241e+07 49.685 0.00182892 0.761872 0 50.3368 GTEX-Q2AG-0826-SM-2HMKF 2 C1 2 ~8x6.5mm aliquots 6.3 Thyroid Thyroid 0002046 800 1074 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 RNASEQ 0.723386 195628 0.959739 0.731155 0.740782 25618 1 76 0.00343005 135 0 8.65048e+07 0.039983 524306 1.18313e+08 2.86779e+07 25673 4.25739e+07 0 0.218957 0.731155 0.541626 8.65048e+07 0.0125364 1.85242e+07 1.15265e+07 1.87738e+07 159 1.91441e+07 1.24395e+07 0.00793483 1.89927e+07 49.8016 0.00443153 0.738924 0 50.3347 GTEX-Q2AG-0826-SM-2IZK5 2 C1 2 ~8x6.5mm aliquots 6.3 Thyroid Thyroid 0002046 800 1074 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-0926-SM-48U1Q 1 C1 6 ~9x1.5mm pieces, minimal atherosis 7 Blood Vessel Artery - Aorta 0001496 803 1072 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990743 209272 0.972525 0.992133 0.780373 21912 1 76 0.00217791 136 0 6.84383e+07 0.0270898 130433 6.8981e+07 3.21628e+06 21943 3.40715e+07 0 0.192152 0.992133 0.774234 6.84383e+07 0.00288 1.48098e+07 6.21971e+06 1.48524e+07 155 1.48843e+07 1.15495e+07 0.00252846 1.4874e+07 49.9826 0.00189085 0.993523 0 50.0718 GTEX-Q2AG-1026-SM-2HMJX 2 C1 2 ~8x6.5mm aliquots, areas of interstitial fibrosis/inflammation 8.1 Lung Lung 0008952 806 1070 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1156_2 04/02/2012 TruSeq.v1 EXCLUDE 0.359676 56144 0.967411 0.372776 0.722783 22933 1 76 0.00380084 102 0 5.27808e+07 0.0321384 384516 1.41589e+08 4.04561e+07 22955 2.52034e+07 0 0.244629 0.372776 0.269436 5.27808e+07 0.0611754 1.11198e+07 6.13204e+06 1.13889e+07 112 1.21872e+07 7.20592e+06 0.03148 1.19911e+07 49.5945 0.00271573 0.385875 0 50.5976 GTEX-Q2AG-1026-SM-2IZK1 2 C1 2 ~8x6.5mm aliquots, areas of interstitial fibrosis/inflammation 8.1 Lung Lung 0008952 806 1070 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-1026-SM-33HBW 2 C1 2 ~8x6.5mm aliquots, areas of interstitial fibrosis/inflammation 8.1 Lung Lung 0008952 806 1070 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.972314 314850 0.967671 0.974811 0.706892 26350 1 76 0.00239137 520 0 1.59607e+08 0.0319386 996378 1.63731e+08 1.46998e+07 26436 7.92249e+07 0 0.260779 0.974811 0.689086 1.59607e+08 0.0061986 3.51171e+07 1.37109e+07 3.52937e+07 469 3.54267e+07 2.07078e+07 0.00429011 3.53749e+07 49.9634 0.00608544 0.977308 0 50.1254 GTEX-Q2AG-1126-SM-48U1P 1 C1 2 ~9x7.5mm aliquots, patchy mixed micro-and macro-vesicular steatosis, ~25% 6.2 Liver Liver 0001114 807 1071 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.986412 857401 0.93843 0.987913 0.793342 21218 1 76 0.00198842 190 0 6.60804e+07 0.0614251 1.34376e+06 6.68889e+07 3.10892e+06 21232 3.29161e+07 0 0.145088 0.987913 0.783753 6.60804e+07 0.00270744 1.40188e+07 3.09967e+07 1.42018e+07 205 1.41686e+07 5.65899e+06 0.00234739 1.41668e+07 49.9968 0.0200895 0.989413 0 50.3244 GTEX-Q2AG-1226-SM-4GICA 1 C1 6 ~7x2.5mm pieces 6.3 Esophagus Esophagus - Muscularis 0004648 809 1069 BP-19901 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.985302 261679 0.969651 0.988356 0.78309 23157 1 76 0.00241744 194 0 8.19881e+07 0.0301404 1.12192e+06 8.2954e+07 8.47258e+06 23185 4.07406e+07 0 0.186562 0.988356 0.773971 8.19881e+07 0.00381664 1.76961e+07 7.72902e+06 1.77845e+07 212 1.78169e+07 1.11e+07 0.00311488 1.79048e+07 50.123 0.0135246 0.99141 0 50.1246 GTEX-Q2AG-1326-SM-43V8K 2 C1 6 ~7x1mm pieces. Squamous mucosa focally sloughing, ~ 40-50% of thickness 8.5 Esophagus Esophagus - Mucosa 0006920 811 1069 BP-19902 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990775 232489 0.978888 0.992717 0.744217 21279 1 76 0.0020318 166 0 7.96936e+07 0.0208775 1.06842e+06 8.02782e+07 3.92799e+06 21304 3.96834e+07 0 0.234672 0.992717 0.738796 7.96936e+07 0.00270374 1.81698e+07 9.57193e+06 1.8167e+07 180 1.82277e+07 1.27766e+07 0.00236711 1.82612e+07 50.0459 0.013309 0.994659 0 49.9962 GTEX-Q2AG-2326-SM-EZ6KY 3 C1 4 ~6.5x4mm aliquots. Autolyzed endocervical glands with tunnel clusters/Nabothian cysts present 5.8 Cervix Uteri Cervix - Ectocervix 0012249 838 1050 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985797 205810 0.967119 0.987163 0.738525 24088 1 76 0.00254346 210 0 8.95518e+07 0.0326192 170468 9.07163e+07 6.76229e+06 24127 4.46214e+07 0 0.228595 0.987163 0.729044 8.95518e+07 0.00362452 1.96836e+07 9.58267e+06 1.96936e+07 242 1.96811e+07 1.41283e+07 0.00308324 1.98127e+07 50.1666 0.00187913 0.988528 0 50.0127 GTEX-Q2AG-2826-SM-2HMJQ 2 C1 4 ~6x4 fragmented aliquots 6.3 Brain Brain - Cerebellum 0002037 854 1038 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1156_2 02/15/2012 TruSeq.v1 RNASEQ 0.713087 101397 0.94813 0.715061 0.714169 23539 1 76 0.0027863 106 0 6.35563e+07 0.0515524 1.14738e+06 8.88824e+07 1.45593e+07 23573 3.12795e+07 0 0.233962 0.715061 0.510674 6.35563e+07 0.00955136 1.35776e+07 7.27912e+06 1.3924e+07 127 1.39668e+07 7.24648e+06 0.00615949 1.36818e+07 49.4846 0.012909 0.717036 0 50.6298 GTEX-Q2AG-2826-SM-2IZJY 2 C1 4 ~6x4 fragmented aliquots 6.3 Brain Brain - Cerebellum 0002037 854 1038 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-2926-SM-2HMJ3 2 C1 4 fragmented aliquots, ~ 6x4mm 6 Brain Brain - Cortex 0001870 851 1041 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1156_1 02/15/2012 TruSeq.v1 RNASEQ 0.712682 213968 0.864268 0.719462 0.646251 31986 1 76 0.00284953 104 0 7.34078e+07 0.135463 2.67468e+06 1.02031e+08 1.63115e+07 32008 3.60782e+07 0 0.218017 0.719462 0.464953 7.34078e+07 0.00960694 1.43742e+07 1.01193e+07 1.46316e+07 138 1.48594e+07 6.26645e+06 0.00619639 1.46832e+07 49.7017 0.0262142 0.726242 0 50.4436 GTEX-Q2AG-2926-SM-2IZJR 2 C1 4 fragmented aliquots, ~ 6x4mm 6 Brain Brain - Cortex 0001870 851 1041 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AG-3026-SM-48U1L 2 C1 Fragmented ~9x7mm aliquot 6.5 Pituitary Pituitary 0000007 855 1038 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989141 389609 0.954972 0.990858 0.761475 24474 1 76 0.00193051 132 0 6.98343e+07 0.0448444 315113 7.04786e+07 3.28259e+06 24506 3.47644e+07 0 0.193498 0.990858 0.754514 6.98343e+07 0.00273651 1.38179e+07 1.01174e+07 1.38792e+07 159 1.38936e+07 1.07259e+07 0.00233281 1.39232e+07 50.0533 0.00447104 0.992575 0 50.1107 GTEX-Q2AH-0004-SM-2IJGI B1 Blood Whole Blood 0013756 -79 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6298101025_R04C01 GTEX-Q2AH-0004-SM-2XK1W B1 Blood Whole Blood 0013756 -79 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R02C02 GTEX-Q2AH-0004-SM-4X62O B1 Blood Whole Blood 0013756 -79 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-Q2AH-0004-SM-5JK52 B1 Blood Whole Blood 0013756 -79 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-Q2AH-0005-SM-2I3FI B1 7.8 Blood Whole Blood 0013756 -79 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.196319 208237 0.970513 0.220882 0.812158 17338 1 76 0.00680072 90 0 4.771e+07 0.0268929 213618 2.15998e+08 1.49579e+08 17340 2.09834e+07 0 0.158355 0.220882 0.179391 4.771e+07 0.0765017 9.50486e+06 5.94248e+07 9.79934e+06 107 1.21091e+07 1.09156e+07 0.0377757 1.19707e+07 49.7126 0.000988983 0.245445 0 50.7627 GTEX-Q2AH-0005-SM-2IZIK B1 7.8 Blood Whole Blood 0013756 -79 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-0005-SM-33HBR B1 7.8 Blood Whole Blood 0013756 -79 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.960687 773974 0.970187 0.965641 0.827548 18582 1 76 0.00315348 177 0 1.1852e+08 0.026881 598334 1.22737e+08 1.23372e+07 18589 5.84795e+07 0 0.142638 0.965641 0.799114 1.1852e+08 0.00867176 2.60848e+07 9.26954e+07 2.70346e+07 201 2.6954e+07 2.74706e+07 0.00589846 2.67489e+07 49.8091 0.00487493 0.970595 0 50.894 GTEX-Q2AH-0005-SM-5SI7G B1 7.8 Blood Whole Blood 0013756 -79 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.983323 537872 0.974269 0.986561 0.83724 16978 1 76 0.00242057 120 0 7.37462e+07 0.0250589 280669 7.47508e+07 7.99292e+06 16983 3.66491e+07 0 0.137029 0.986561 0.825988 7.37462e+07 0.00408864 1.65992e+07 6.95375e+07 1.67551e+07 139 1.67646e+07 1.76019e+07 0.00325187 1.68349e+07 50.1047 0.00375473 0.989799 0 50.2336 GTEX-Q2AH-0008-SM-48U2J B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 180 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993359 349129 0.979909 0.99501 0.872044 19615 1 76 0.00178465 148 0 6.47858e+07 0.0197648 199468 6.51107e+07 3.21077e+06 19624 3.22821e+07 0 0.107864 0.99501 0.867693 6.47858e+07 0.00240319 1.4442e+07 8.67538e+06 1.46081e+07 143 1.46531e+07 1.68393e+07 0.00209341 1.4503e+07 49.7425 0.00306352 0.99666 0 50.2858 GTEX-Q2AH-0126-SM-48U2B 1 B1 2 pieces up to 9x2.8 mm; 6x1 mm adipose on 1 aliquot's suface; 10% adipose on other 8.9 Adrenal Gland Adrenal Gland 0002369 72 1220 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99339 233453 0.977595 0.995007 0.839647 21584 1 76 0.00219408 161 0 7.0704e+07 0.0221206 1.24458e+06 7.10588e+07 3.22052e+06 21603 3.52264e+07 0 0.137947 0.995007 0.835455 7.0704e+07 0.00284124 1.55827e+07 8.55971e+06 1.57449e+07 175 1.57437e+07 1.22268e+07 0.00251713 1.5686e+07 49.9081 0.0175148 0.996624 0 50.2588 GTEX-Q2AH-0226-SM-48U1I 1 B1 2 pieces about 7mm sq; large infarcts, 15 and 20% of aliquots; several thrombosed arteries, large and small; thickened capsule (0.25mm) along one surface and thick trabeculae. Only ~30% of splenic parenchyma present. 6.5 Spleen Spleen 0002106 78 1215 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989723 208821 0.966208 0.991333 0.775747 23492 1 76 0.00253674 159 0 7.49522e+07 0.0330414 444376 7.56074e+07 3.71587e+06 23521 3.73026e+07 0 0.190461 0.991333 0.769023 7.49522e+07 0.00330615 1.64867e+07 8.98538e+06 1.65584e+07 174 1.65702e+07 1.13379e+07 0.00292082 1.65918e+07 50.0326 0.00587741 0.992943 0 50.1084 GTEX-Q2AH-0326-SM-48U1K 1 B1 6 pieces up too 10.5x1.9 mm 7.4 Blood Vessel Artery - Aorta 0001496 106 1188 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991174 235960 0.975762 0.993085 0.845994 21482 1 76 0.00198335 161 0 7.19309e+07 0.0239436 184656 7.24317e+07 3.42122e+06 21494 3.58211e+07 0 0.129768 0.993085 0.840144 7.19309e+07 0.00273854 1.56723e+07 5.79588e+06 1.57517e+07 178 1.5788e+07 1.35074e+07 0.00236022 1.57729e+07 49.9761 0.00254938 0.994997 0 50.1263 GTEX-Q2AH-0426-SM-2I3EP 1 B1 2 pieces, 11x7.5 & 9x6mm 8.1 Lung Lung 0008952 106 1189 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.967139 145054 0.970273 0.972048 0.795709 24516 1 76 0.00284752 159 0 8.16817e+07 0.0292683 335978 8.40305e+07 8.38553e+06 24549 4.04972e+07 0 0.174564 0.972048 0.773468 8.16817e+07 0.00404313 1.78742e+07 7.7822e+06 1.81056e+07 195 1.82562e+07 1.46333e+07 0.00344231 1.81099e+07 49.7988 0.00399829 0.976957 0 50.3216 GTEX-Q2AH-0426-SM-2IZIE 1 B1 2 pieces, 11x7.5 & 9x6mm 8.1 Lung Lung 0008952 106 1189 BP-19904 RNA isolation_PAXgene Tissue miRNA 11/04/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-0526-SM-2I3ED 1 B1 2 pieces, 8x6mm 8.2 Heart Heart - Left Ventricle 0006566 108 1188 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.96092 141926 0.982522 0.965231 0.855914 20846 1 76 0.00288795 266 0 8.57625e+07 0.0171829 2.52442e+06 8.88518e+07 8.61722e+06 20861 4.25641e+07 0 0.126609 0.965231 0.826155 8.57625e+07 0.00410428 1.86139e+07 1.67065e+07 1.89526e+07 256 1.90051e+07 1.43216e+07 0.0034934 1.8881e+07 49.8362 0.0284115 0.969543 0 50.4509 GTEX-Q2AH-0526-SM-2IZI3 1 B1 2 pieces, 8x6mm 8.2 Heart Heart - Left Ventricle 0006566 108 1188 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-0626-SM-48TZJ 1 B1 2 pieces up to 4.5x5mm, large non-occlusive atheromatous plaques; ~3.7x1.5 mm adipose tissue on exterior of each aliquot 7.6 Blood Vessel Artery - Coronary 0001621 115 1181 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990738 289342 0.973504 0.992832 0.826301 23395 1 76 0.0022916 207 0 8.30066e+07 0.025883 266337 8.3606e+07 3.93563e+06 23416 4.13128e+07 0 0.147203 0.992832 0.820378 8.30066e+07 0.00306982 1.80935e+07 8.12890e+06 1.81995e+07 212 1.82289e+07 1.5345e+07 0.00267989 1.82335e+07 50.0063 0.00318562 0.994925 0 50.146 GTEX-Q2AH-0726-SM-2I3EA 1 B1 2 pieces 9x9 & 12x8 mm 6.8 Thyroid Thyroid 0002046 118 1179 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.935003 152059 0.961012 0.937206 0.724655 24708 1 76 0.00296813 129 0 7.78462e+07 0.0384549 359188 8.3062e+07 8.39912e+06 24754 3.86987e+07 0 0.236357 0.937206 0.679151 7.78462e+07 0.00433814 1.68035e+07 9.78882e+06 1.70663e+07 157 1.71138e+07 1.12184e+07 0.00365153 1.69169e+07 49.7106 0.00432434 0.939409 0 50.388 GTEX-Q2AH-0726-SM-2IZHZ 1 B1 2 pieces 9x9 & 12x8 mm 6.8 Thyroid Thyroid 0002046 118 1179 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-0826-SM-48TZN 1 B1 6 pieces up to 7.7x5.2 mm; tissue tears 9.3 Esophagus Esophagus - Mucosa 0006920 123 1175 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.992774 627651 0.975945 0.993621 0.83221 23824 1 76 0.00250953 383 0 1.38136e+08 0.0236579 813086 1.39022e+08 1.04921e+07 23851 6.88494e+07 0 0.143735 0.993621 0.826902 1.38136e+08 0.00289552 3.10731e+07 2.15008e+07 3.12374e+07 349 3.12281e+07 2.83908e+07 0.00270236 3.12e+07 49.9775 0.0058486 0.994468 0 50.1319 GTEX-Q2AH-0926-SM-48TZK 1 B1 2 pieces 11x8 & 9x9; fatty attachment about 25% of 1 aliquot 7.1 Pancreas Pancreas 0001150 126 1173 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989734 245874 0.973355 0.991838 0.837585 22304 1 76 0.00236102 120 0 7.02454e+07 0.0264944 322345 7.08235e+07 3.57738e+06 22315 3.49706e+07 0 0.13577 0.991838 0.830748 7.02454e+07 0.00312404 1.58732e+07 1.23039e+07 1.60014e+07 138 1.60081e+07 1.64766e+07 0.00274172 1.60136e+07 50.0085 0.00455139 0.993941 0 50.201 GTEX-Q2AH-1026-SM-48TZI 1 B1 5 pieces up to 9x3 mm; numerous tissue tears in mucosa of 4 of 5 aliquots 8 Esophagus Esophagus - Muscularis 0004648 128 1172 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992022 209270 0.976108 0.99388 0.841715 21194 1 76 0.00211116 137 0 6.69311e+07 0.0236086 546212 6.73433e+07 3.24255e+06 21206 3.33407e+07 0 0.134393 0.99388 0.836564 6.69311e+07 0.00276729 1.44235e+07 6.70518e+06 1.45352e+07 161 1.45489e+07 1.21413e+07 0.00243861 1.45284e+07 49.9647 0.00811086 0.995738 0 50.1929 GTEX-Q2AH-1126-SM-48TZM 1 B1 6 pieces up to 12 x 4.4 mm; good mucosa 8 Stomach Stomach 0000945 131 1170 BP-19999 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.984985 333498 0.978927 0.985921 0.84955 23209 1 76 0.00282985 441 0 1.13096e+08 0.0201743 1.04388e+06 1.14711e+08 8.72545e+06 23235 5.63147e+07 0 0.129378 0.985921 0.837589 1.13096e+08 0.0033349 2.56956e+07 9.71309e+07 2.62737e+07 352 2.62682e+07 2.84546e+07 0.00308213 2.5807e+07 49.5571 0.00910004 0.986858 0 50.5562 GTEX-Q2AH-1226-SM-48TZL 1 B1 6 pieces up to 9x3.6 mm; reactive lymphoid hyperplasia; good mucosa; edematous submucosa 8 Colon Colon - Transverse 0001157 134 1168 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989953 190582 0.97299 0.991494 0.826644 23020 1 76 0.00308311 210 0 7.7395e+07 0.0242439 1.03839e+06 7.80589e+07 3.67648e+06 23041 3.84619e+07 0 0.146346 0.991494 0.819613 7.7395e+07 0.00371004 1.722e+07 1.26351e+07 1.73628e+07 210 1.73816e+07 1.25604e+07 0.00339609 1.73086e+07 49.8947 0.0133027 0.993035 0 50.2065 GTEX-Q2AH-1426-SM-EXOHC 1 B1 2 pieces, ~10x 7x5 & 8.8x5 mm; hyperplasia 5.5 Prostate Prostate 0002367 145 1160 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.988013 256026 0.966104 0.989791 0.770773 24842 1 76 0.00229151 208 0 8.94154e+07 0.0336951 709962 9.03377e+07 5.47241e+06 24876 4.45147e+07 0 0.19533 0.989791 0.762904 8.94154e+07 0.00344523 1.94203e+07 8.16757e+06 1.95849e+07 253 1.95286e+07 1.26473e+07 0.00286733 1.96223e+07 50.1196 0.00785898 0.991568 0 50.211 GTEX-Q2AH-1526-SM-48TZG 1 B1 2 pieces, 9x4, 13x8 mm; both contain thick capsule; spermatogenesis present 7.1 Testis Testis 0000473 154 1152 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989848 492138 0.92033 0.991654 0.713006 33284 1 76 0.00220167 171 0 8.71135e+07 0.079341 608406 8.78467e+07 4.03525e+06 33355 4.33884e+07 0 0.207324 0.991654 0.707055 8.71135e+07 0.00283228 1.79126e+07 1.99699e+07 1.80742e+07 187 1.81637e+07 1.40231e+07 0.0025164 1.7972e+07 49.7347 0.00692577 0.99346 0 50.2245 GTEX-Q2AH-1626-SM-2QU36 1 B1 6 pieces up to 7.7x2.6 mm; several sectioning lines and tissue tears 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 186 1120 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-1626-SM-3GAF8 1 B1 6 pieces up to 7.7x2.6 mm; several sectioning lines and tissue tears 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 186 1120 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.922743 210587 0.967955 0.923667 0.782617 23041 1 76 0.00228864 530 0 1.43415e+08 0.0317268 971132 1.55267e+08 9.10818e+06 23087 7.12581e+07 0 0.185338 0.923667 0.722878 1.43415e+08 0.00740962 3.11249e+07 1.30535e+07 3.13675e+07 466 3.10604e+07 2.12083e+07 0.00484656 3.15741e+07 50.4101 0.00625459 0.924592 0 50.1941 GTEX-Q2AH-1726-SM-2S1OT 1 B1 2 pieces, 14x10 & 16x8mm; largest with central hollow defect; 2 large veins in one aliquot 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 188 1119 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.651834 36310 0.975196 0.657173 0.830833 19528 1 76 0.00286605 106 0 3.09494e+07 0.0245075 175495 4.70948e+07 3.7027e+06 19538 1.52888e+07 0 0.144363 0.657173 0.546001 3.09494e+07 0.017121 6.6445e+06 3.10304e+06 6.82329e+06 114 6.91792e+06 5.1929e+06 0.00993562 6.77313e+06 49.4712 0.00372642 0.662512 0 50.6638 GTEX-Q2AH-1726-SM-3NB2B 1 B1 2 pieces, 14x10 & 16x8mm; largest with central hollow defect; 2 large veins in one aliquot 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 188 1119 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-2318 12/16/2012 TruSeq.v1 EXCLUDE 0.98516 368660 0.9753 0.989747 0.837425 23546 1 76 0.00418183 276 0 1.02787e+08 0.0244398 613254 1.03852e+08 1.86186e+07 23573 5.09932e+07 0 0.137875 0.989747 0.828839 1.02787e+08 0.00605169 2.22456e+07 1.1543e+07 2.25187e+07 272 2.25876e+07 1.71903e+07 0.00511243 2.26256e+07 50.042 0.00590509 0.994334 0 50.305 GTEX-Q2AH-1726-SM-DIPDV 1 B1 2 pieces, 14x10 & 16x8mm; largest with central hollow defect; 2 large veins in one aliquot 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 188 1119 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-10311,LCSET-10533 01/26/2017 TruSeq.v1 RNASEQ 0.992997 512278 0.976795 0.99429 0.852238 24705 1 76 0.00220952 388 0 1.87111e+08 0.0229109 1.14192e+06 1.88185e+08 7.18755e+06 24740 9.32581e+07 0 0.124557 0.99429 0.847372 1.87111e+08 0.00247156 4.06532e+07 1.92477e+07 4.09678e+07 370 4.09265e+07 3.33912e+07 0.00234037 4.09181e+07 49.9949 0.00606808 0.995583 0 50.1927 GTEX-Q2AH-1826-SM-2QU55 1 B1 2 pieces , 10x6 & 9x6mm; large tissue tears in one piece 8.2 Muscle Muscle - Skeletal 0011907 190 1118 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-1826-SM-2S1Q2 1 B1 2 pieces , 10x6 & 9x6mm; large tissue tears in one piece 8.2 Muscle Muscle - Skeletal 0011907 190 1118 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.868328 64616 0.981002 0.873424 0.863791 20094 1 76 0.00258985 117 0 7.44479e+07 0.0187101 551794 8.52368e+07 6.27708e+06 20101 3.68809e+07 0 0.117211 0.873424 0.754456 7.44479e+07 0.0161295 1.55667e+07 7.14936e+06 1.59822e+07 131 1.60897e+07 1.5063e+07 0.00932019 1.5816e+07 49.5711 0.00647366 0.878521 0 50.6584 GTEX-Q2AH-1926-SM-2QU43 1 B1 2 pieces ~5x2.6mm; minor fat tissue 7.4 Nerve Nerve - Tibial 0001323 195 1113 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-1926-SM-2S1PN 1 B1 2 pieces ~5x2.6mm; minor fat tissue 7.4 Nerve Nerve - Tibial 0001323 195 1113 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.826701 85520 0.967851 0.831439 0.773489 22650 1 76 0.00291578 119 0 5.71825e+07 0.0319012 156304 6.87753e+07 5.71477e+06 22673 2.83056e+07 0 0.194362 0.831439 0.643109 5.71825e+07 0.0162278 1.24368e+07 6.10045e+06 1.25993e+07 127 1.27212e+07 9.02516e+06 0.00953385 1.26002e+07 49.7609 0.00227268 0.836177 0 50.3245 GTEX-Q2AH-2026-SM-2QU4Q 1 B1 2 pieces with arteries, 3x1.6mm; veins, 1 large; minor fat component 8.2 Blood Vessel Artery - Tibial 0007610 221 1088 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AH-2026-SM-2S1PX 1 B1 2 pieces with arteries, 3x1.6mm; veins, 1 large; minor fat component 8.2 Blood Vessel Artery - Tibial 0007610 221 1088 BP-20000 RNA isolation_PAXgene Tissue miRNA 11/09/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.584685 22645 0.977104 0.591343 0.835324 18563 1 76 0.00264841 102 0 2.90507e+07 0.0224635 75213 4.91266e+07 5.3534e+06 18569 1.42919e+07 0 0.14178 0.591343 0.493963 2.90507e+07 0.0168076 6.16022e+06 2.11883e+06 6.31668e+06 112 6.45583e+06 5.72337e+06 0.00964831 6.314e+06 49.4447 0.001531 0.598001 0 50.627 GTEX-Q2AI-0003-SM-2IJGK B1 Blood Whole Blood 0013756 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410089_R01C01 GTEX-Q2AI-0003-SM-2XK1X B1 Blood Whole Blood 0013756 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R04C01 GTEX-Q2AI-0003-SM-3UZFI B1 Blood Whole Blood 0013756 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-Q2AI-0003-SM-5JK3F B1 Blood Whole Blood 0013756 BP-19660 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/26/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-Q2AI-0006-SM-2I3FG B1 8.6 Blood Whole Blood 0013756 -87 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.932111 438369 0.967532 0.936601 0.830471 18509 1 76 0.00264967 151 0 8.2988e+07 0.031961 440612 8.86055e+07 9.4924e+06 18517 4.11684e+07 0 0.137061 0.936601 0.77782 8.2988e+07 0.00409053 1.81835e+07 5.29053e+07 1.87847e+07 177 1.8961e+07 1.85139e+07 0.00336665 1.83937e+07 49.2407 0.00497274 0.941091 0 50.8131 GTEX-Q2AI-0006-SM-2IZII B1 8.6 Blood Whole Blood 0013756 -87 BP-19649 RNA isolation_PAXgene Blood RNA (Manual) 10/26/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-0008-SM-48U2H B1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 186 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993212 370019 0.971162 0.994727 0.844134 20825 1 76 0.00174662 175 0 7.21181e+07 0.0284675 241650 7.25004e+07 3.59859e+06 20839 3.59386e+07 0 0.127027 0.994727 0.839683 7.21181e+07 0.00237807 1.59812e+07 9.72755e+06 1.60586e+07 193 1.61419e+07 1.49163e+07 0.00206186 1.59964e+07 49.7736 0.00333309 0.996243 0 50.1207 GTEX-Q2AI-0226-SM-48U1D 1 B1 2 pieces ~9x1 mm; good cortical morphology 9.1 Adrenal Gland Adrenal Gland 0002369 65 678 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993146 203773 0.978501 0.994785 0.849791 21136 1 76 0.00179107 127 0 6.2908e+07 0.0211127 1.21580e+06 6.32377e+07 3.02635e+06 21150 3.13453e+07 0 0.128709 0.994785 0.84536 6.2908e+07 0.00246073 1.39252e+07 6.87654e+06 1.40045e+07 159 1.40453e+07 1.13753e+07 0.00212534 1.39747e+07 49.8739 0.0192259 0.996425 0 50.1418 GTEX-Q2AI-0326-SM-2I3EK 1 B1 2 pieces 11x7 & 10x8mm; 1.3mm circular defect corresponds to cassette's center-point 7.2 Thyroid Thyroid 0002046 99 644 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.935953 160556 0.967346 0.940632 0.776551 24950 1 76 0.00245761 272 0 9.27077e+07 0.0323604 547321 9.8559e+07 1.02554e+07 24994 4.59655e+07 0 0.190796 0.940632 0.730448 9.27077e+07 0.00376431 2.01285e+07 9.25394e+06 2.04488e+07 263 2.06063e+07 1.55812e+07 0.00310771 2.03874e+07 49.733 0.00555324 0.94531 0 50.3947 GTEX-Q2AI-0326-SM-2IZI9 1 B1 2 pieces 11x7 & 10x8mm; 1.3mm circular defect corresponds to cassette's center-point 7.2 Thyroid Thyroid 0002046 99 644 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-0426-SM-48U13 1 B1 2 pieces 12x8 & 7x7 mm; ~20% fat in each (included amongst the parenchyma, not outside) 7.1 Pancreas Pancreas 0001150 103 640 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992078 192831 0.97177 0.993586 0.842136 20704 1 76 0.00214072 102 0 6.05997e+07 0.0279433 280118 6.09909e+07 2.97573e+06 20717 3.01977e+07 0 0.129635 0.993586 0.836735 6.05997e+07 0.00283207 1.3741e+07 1.25099e+07 1.39249e+07 109 1.39089e+07 1.60826e+07 0.00248587 1.38492e+07 49.8925 0.00459279 0.995095 0 50.3323 GTEX-Q2AI-0526-SM-2I3EJ 1 B1 2 pieces ~9x7 mm; extensive bronchopneumonia 8.4 Lung Lung 0008952 111 632 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.56074 151562 0.972683 0.570758 0.819226 24745 1 76 0.00380849 132 0 9.18543e+07 0.0268839 655093 1.60934e+08 4.50471e+07 24767 4.49038e+07 0 0.153457 0.570758 0.46758 9.18543e+07 0.0278749 1.98357e+07 1.27307e+07 2.03539e+07 154 2.10435e+07 1.699e+07 0.0156305 2.06582e+07 49.5381 0.00407057 0.580776 0 50.6446 GTEX-Q2AI-0526-SM-2IZI8 1 B1 2 pieces ~9x7 mm; extensive bronchopneumonia 8.4 Lung Lung 0008952 111 632 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-0626-SM-48TZU 1 B1 6 pieces up to 7x2.5 mm; hyperplastic mucosa up to 0.7mm; 9.3 Esophagus Esophagus - Mucosa 0006920 129 614 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99032 204261 0.976727 0.992443 0.836035 21625 1 76 0.00202495 138 0 6.58721e+07 0.0229154 435837 6.63737e+07 3.17663e+06 21638 3.28032e+07 0 0.140692 0.992443 0.829717 6.58721e+07 0.0027798 1.47929e+07 9.64254e+06 1.49694e+07 152 1.50266e+07 1.32781e+07 0.00240157 1.48681e+07 49.7349 0.00656641 0.994566 0 50.2965 GTEX-Q2AI-0826-SM-48TZO 1 B1 6 pieces up to 8x4.5 mm; good mucosa; many mucosal tissue tears in every piece, doesn't appear to be poor fixation 7.2 Stomach Stomach 0000945 134 609 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.986184 125740 0.981567 0.987975 0.862224 21196 1 76 0.00177949 256 0 6.28687e+07 0.0181254 1.29566e+06 6.36338e+07 2.99718e+06 21212 3.13114e+07 0 0.119342 0.987975 0.851856 6.28687e+07 0.00250434 1.44771e+07 5.48923e+07 1.4652e+07 184 1.46999e+07 1.62001e+07 0.00214126 1.45383e+07 49.7237 0.0203612 0.989766 0 50.3001 GTEX-Q2AI-0926-SM-48U1F 1 B1 6 pieces up to 7.5x4 mm; good mucosa 8.2 Colon Colon - Transverse 0001157 137 606 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991003 167781 0.977017 0.992539 0.841622 22256 1 76 0.00194549 185 0 6.57467e+07 0.0223673 867211 6.62409e+07 3.13528e+06 22271 3.27552e+07 0 0.135395 0.992539 0.835342 6.57467e+07 0.00263786 1.46757e+07 7.97414e+06 1.47738e+07 175 1.47727e+07 1.14419e+07 0.00229114 1.4769e+07 49.9937 0.0130918 0.994074 0 50.1666 GTEX-Q2AI-1126-SM-48U19 1 B1 2 pieces 9x6 & 7x7 mm; hyperplastic 7.3 Prostate Prostate 0002367 153 590 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991205 207314 0.960622 0.992647 0.735905 24495 1 76 0.00202247 133 0 6.82783e+07 0.0391268 306710 6.87841e+07 3.15574e+06 24527 3.40126e+07 0 0.224718 0.992647 0.730493 6.82783e+07 0.00274969 1.5012e+07 6.63608e+06 1.50693e+07 154 1.50772e+07 9.21907e+06 0.00238555 1.51012e+07 50.0398 0.00445902 0.994088 0 50.0953 GTEX-Q2AI-1226-SM-48U14 1 B1 2 pieces up to 10x6 mm; spermatogenesis 7.8 Testis Testis 0000473 157 586 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990809 447218 0.9238 0.992338 0.735027 31743 1 76 0.00197392 147 0 7.27166e+07 0.0758383 570673 7.32781e+07 3.60538e+06 31797 3.6229e+07 0 0.188773 0.992338 0.729395 7.27166e+07 0.00260203 1.49739e+07 1.70487e+07 1.50882e+07 147 1.51678e+07 1.28071e+07 0.00228749 1.5e+07 49.7219 0.00778778 0.993866 0 50.19 GTEX-Q2AI-1326-SM-2QU41 1 B1 6 pieces up to 8x3 mm; moderate tissue tears 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 185 558 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-1326-SM-2S1PL 1 B1 6 pieces up to 8x3 mm; moderate tissue tears 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 185 558 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.439019 41238 0.970242 0.444823 0.79735 19996 1 76 0.0025901 110 0 2.50511e+07 0.0292786 254915 5.63171e+07 5.53515e+06 20003 1.22817e+07 0 0.172892 0.444823 0.354679 2.50511e+07 0.017886 5.37288e+06 3.2224e+06 5.56139e+06 113 5.69304e+06 3.86597e+06 0.0101383 5.53669e+06 49.3038 0.00452642 0.450627 0 50.862 GTEX-Q2AI-1426-SM-2QU2Y 1 B1 2 pieces 10x8 & 13x10 with large central hollow fixation defects 7 Adipose Tissue Adipose - Subcutaneous 0002190 177 566 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-1426-SM-2S1P5 1 B1 2 pieces 10x8 & 13x10 with large central hollow fixation defects 7 Adipose Tissue Adipose - Subcutaneous 0002190 177 566 BP-20043 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.582738 60796 0.973278 0.586093 0.789819 22260 1 76 0.00257058 106 0 5.94284e+07 0.0260994 299069 1.01398e+08 8.88349e+06 22280 2.93607e+07 0 0.183458 0.586093 0.462908 5.94284e+07 0.0167279 1.2944e+07 5.54184e+06 1.32354e+07 111 1.33887e+07 9.34122e+06 0.00960869 1.30998e+07 49.4546 0.00294947 0.589449 0 50.5565 GTEX-Q2AI-1526-SM-2QU49 1 B1 2 pieces, 10x6 & 14x6 mm; minimal fat and stroma 8.4 Muscle Muscle - Skeletal 0011907 186 557 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-1526-SM-3GIJ3 1 B1 2 pieces, 10x6 & 14x6 mm; minimal fat and stroma 8.4 Muscle Muscle - Skeletal 0011907 186 557 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.882102 84795 0.983057 0.885533 0.874009 17668 1 76 0.00246709 167 0 3.78972e+07 0.0167066 634104 4.27959e+07 3.57094e+06 17670 1.87682e+07 0 0.109048 0.885533 0.773964 3.78972e+07 0.00795886 8.27795e+06 3.32315e+06 8.15586e+06 175 8.17057e+06 7.23993e+06 0.00520234 8.3946e+06 50.6762 0.0148169 0.888965 0 49.6286 GTEX-Q2AI-1626-SM-2QU33 1 B1 2, 2mm pieces each with 1 mm nerves and 50-60% surrounding fat 7.7 Nerve Nerve - Tibial 0001323 187 556 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-1626-SM-2S1P9 1 B1 2, 2mm pieces each with 1 mm nerves and 50-60% surrounding fat 7.7 Nerve Nerve - Tibial 0001323 187 556 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.504077 26227 0.971884 0.511992 0.789315 20367 1 76 0.00278799 108 0 2.42989e+07 0.0278349 98513 4.74595e+07 4.91209e+06 20374 1.18978e+07 0 0.182569 0.511992 0.404123 2.42989e+07 0.0178517 5.20141e+06 2.48052e+06 5.3336e+06 108 5.50488e+06 4.01890e+06 0.0102034 5.3729e+06 49.3933 0.00207573 0.519906 0 50.6274 GTEX-Q2AI-1726-SM-2QU4Z 1 B1 2 pieces each with 1mm artery and 0.8 mm vein plus ~30% of each 2.5 mm aliquot with surrounding fat and stroma 8.5 Blood Vessel Artery - Tibial 0007610 187 556 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q2AI-1726-SM-2S1PZ 1 B1 2 pieces each with 1mm artery and 0.8 mm vein plus ~30% of each 2.5 mm aliquot with surrounding fat and stroma 8.5 Blood Vessel Artery - Tibial 0007610 187 556 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.525273 20966 0.975612 0.53619 0.843224 18691 1 76 0.0025715 106 0 2.43232e+07 0.0240073 89076 4.53629e+07 5.85338e+06 18696 1.18484e+07 0 0.132388 0.53619 0.452128 2.43232e+07 0.0182123 5.13392e+06 1.90612e+06 5.24116e+06 109 5.45975e+06 4.84151e+06 0.0102327 5.36037e+06 49.5408 0.00196363 0.547107 0 50.5168 GTEX-Q734-0001-SM-2IJGM B1 Blood Whole Blood 0013756 -64 BP-19877 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/03/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410089_R02C01 GTEX-Q734-0001-SM-2XK1A B1 Blood Whole Blood 0013756 -64 BP-19877 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/03/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R04C02 GTEX-Q734-0001-SM-3UZFB B1 Blood Whole Blood 0013756 -64 BP-19877 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/03/2011 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-Q734-0001-SM-5JK3N B1 Blood Whole Blood 0013756 -64 BP-19877 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/03/2011 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-Q734-0006-SM-2I3FJ B1 8 Blood Whole Blood 0013756 -64 BP-19878 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.831916 381654 0.963409 0.834778 0.814793 19946 1 76 0.00297981 110 0 6.78552e+07 0.0356526 768068 8.12854e+07 9.48106e+06 19952 3.36755e+07 0 0.148616 0.834778 0.680171 6.78552e+07 0.00485979 1.49368e+07 5.13594e+07 1.54731e+07 129 1.55525e+07 1.51506e+07 0.00391658 1.50847e+07 49.2364 0.00944903 0.837639 0 50.8818 GTEX-Q734-0006-SM-2IZIL B1 8 Blood Whole Blood 0013756 -64 BP-19878 RNA isolation_PAXgene Blood RNA (Manual) 11/03/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q734-0008-SM-48U2I B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 130 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993176 362660 0.976083 0.99471 0.844506 20632 1 76 0.00178347 175 0 7.48095e+07 0.0235757 291079 7.52074e+07 3.65324e+06 20649 3.72778e+07 0 0.131578 0.99471 0.840039 7.48095e+07 0.00243615 1.66111e+07 8.89017e+06 1.67345e+07 174 1.67925e+07 1.70183e+07 0.00210931 1.66642e+07 49.8083 0.00387035 0.996246 0 50.185 GTEX-Q734-0126-SM-48U1E 1 B1 2 ~8.5x6mm aliquots. Cortex only, no visible medulla 7.9 Adrenal Gland Adrenal Gland 0002369 40 1156 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992252 210812 0.975726 0.993902 0.825845 22104 1 76 0.00200913 200 0 7.32652e+07 0.0240345 1.44775e+06 7.37147e+07 3.52249e+06 22128 3.65073e+07 0 0.149881 0.993902 0.820809 7.32652e+07 0.00258981 1.61564e+07 8.52197e+06 1.63236e+07 211 1.63371e+07 1.12917e+07 0.00229899 1.62523e+07 49.87 0.0196399 0.995552 0 50.2574 GTEX-Q734-0226-SM-48U1A 2 B1 2 ~8.5x7.5mm aliquots 7.8 Spleen Spleen 0002106 43 1153 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.985265 284868 0.960837 0.986852 0.77839 23370 1 76 0.00420404 153 0 7.65048e+07 0.0321563 580002 7.75241e+07 3.61188e+06 23396 3.7812e+07 0 0.182447 0.986852 0.768156 7.65048e+07 0.00487649 1.70072e+07 2.1744e+07 1.70671e+07 169 1.71253e+07 1.08338e+07 0.00453972 1.70696e+07 49.9185 0.00748157 0.98844 0 50.0878 GTEX-Q734-0326-SM-48U15 1 B1 2 ~7.5x7.5mm aliquots. Severe bridging fibrosis/early cirrhosis with steatotis and chronic hepatitis. 8.7 Liver Liver 0001114 45 1151 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992398 226709 0.976394 0.993925 0.840589 21978 1 76 0.0020286 198 0 8.2489e+07 0.0232121 677085 8.29931e+07 3.9618e+06 21991 4.11066e+07 0 0.135804 0.993925 0.835483 8.2489e+07 0.00261426 1.79353e+07 1.10373e+07 1.80165e+07 223 1.80691e+07 1.71602e+07 0.00232098 1.79968e+07 49.8997 0.00815832 0.995453 0 50.1129 GTEX-Q734-0426-SM-48TZX 1 B1 2 ~8.5x8mm aliquots, well preserved, clean with minimal fat 8.1 Pancreas Pancreas 0001150 49 1147 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993158 197260 0.982578 0.99457 0.860887 20318 1 76 0.00216265 89 0 7.21789e+07 0.0170845 247811 7.25729e+07 3.4933e+06 20328 3.59695e+07 0 0.121691 0.99457 0.856212 7.21789e+07 0.00286458 1.65711e+07 2.02747e+07 1.69813e+07 108 1.68989e+07 2.32942e+07 0.00251312 1.67509e+07 49.7802 0.00341465 0.995982 0 50.6112 GTEX-Q734-0526-SM-2I3EH 1 B1 1 ~14x7mm aliquot, no visible goiter 7.3 Thyroid Thyroid 0002046 54 1142 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.852737 122965 0.961314 0.855868 0.731452 24451 1 76 0.00261663 129 0 7.27646e+07 0.0384065 1.08542e+06 8.50184e+07 9.25216e+06 24496 3.61047e+07 0 0.229862 0.855868 0.626027 7.27646e+07 0.00401475 1.57564e+07 7.51041e+06 1.60195e+07 149 1.61043e+07 1.04204e+07 0.00331313 1.59122e+07 49.7 0.0127669 0.859 0 50.414 GTEX-Q734-0526-SM-2IZI7 1 B1 1 ~14x7mm aliquot, no visible goiter 7.3 Thyroid Thyroid 0002046 54 1142 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q734-0626-SM-2I3EF 1 B1 2 ~11x8mm aliquots. Dense conolidation, pneumonia, fibrosis, pending glass review 8 Lung Lung 0008952 58 1138 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.828283 129206 0.968101 0.831024 0.746279 25217 1 76 0.00308562 130 0 7.50117e+07 0.0304469 615427 9.02642e+07 1.03134e+07 25255 3.71894e+07 0 0.221823 0.831024 0.620176 7.50117e+07 0.0044991 1.65016e+07 1.01229e+07 1.68516e+07 156 1.6944e+07 1.13287e+07 0.00379003 1.66408e+07 49.5485 0.00681807 0.833765 0 50.5247 GTEX-Q734-0626-SM-2IZI5 1 B1 2 ~11x8mm aliquots. Dense conolidation, pneumonia, fibrosis, pending glass review 8 Lung Lung 0008952 58 1138 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q734-0726-SM-48TZP 1 B1 2 ~ 15x11mm aliquots. Corpora albicantia and an occasional ovum noted. 8.5 Ovary Ovary 0000992 66 1130 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991998 281059 0.964498 0.993529 0.746717 23326 1 76 0.0019997 141 0 7.22411e+07 0.0351867 191866 7.27117e+07 3.58512e+06 23361 3.59962e+07 0 0.217781 0.993529 0.741885 7.22411e+07 0.00260062 1.58581e+07 9.73562e+06 1.59516e+07 152 1.59972e+07 1.2823e+07 0.0022997 1.59187e+07 49.8771 0.00263872 0.995059 0 50.1469 GTEX-Q734-0826-SM-48U1G 1 B1 6 ~9x3mm pieces 8.5 Esophagus Esophagus - Muscularis 0004648 75 1121 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992424 243990 0.972314 0.993811 0.809114 22488 1 76 0.0019487 138 0 6.59353e+07 0.0274076 445810 6.6346e+07 3.01121e+06 22507 3.28543e+07 0 0.163199 0.993811 0.804107 6.59353e+07 0.0026428 1.43827e+07 6.25907e+06 1.44712e+07 152 1.44673e+07 1.16213e+07 0.00229527 1.44754e+07 50.0142 0.00671947 0.995197 0 50.1534 GTEX-Q734-1026-SM-48U16 2 B1 6 ~7.5x3mm pieces. Mucosa is fairly well preserved, ~20-25% of thickness 6.7 Stomach Stomach 0000945 81 1115 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.984465 149740 0.981107 0.986205 0.849171 21510 1 76 0.00208928 274 0 6.39469e+07 0.0184639 593959 6.48413e+07 3.18636e+06 21530 3.18484e+07 0 0.131936 0.986205 0.837457 6.39469e+07 0.00283039 1.47782e+07 6.99914e+07 1.50596e+07 186 1.51109e+07 1.72264e+07 0.00245918 1.48339e+07 49.5374 0.00916019 0.987945 0 50.4715 GTEX-Q734-1126-SM-48TZY 1 B1 6 ~8.5x3m pieces. Mucosa is well-preserved, ~ 15% of thickness 8.3 Colon Colon - Transverse 0001157 87 1109 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990901 199743 0.971722 0.992391 0.816528 23207 1 76 0.00234923 172 0 6.9039e+07 0.0269389 897138 6.95683e+07 3.35255e+06 23228 3.43627e+07 0 0.155195 0.992391 0.810315 6.9039e+07 0.00299981 1.53268e+07 8.01413e+06 1.54311e+07 171 1.54539e+07 1.13544e+07 0.00267403 1.53975e+07 49.9087 0.0128958 0.993881 0 50.1696 GTEX-Q734-1426-SM-48TZQ 2 B1 6 ~8x2.5mm pieces. Squamous mucosa is ~ 5-7% of thickness 7.4 Vagina Vagina 0000996 112 1084 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 EXCLUDE 0.991889 197264 0.973236 0.993406 0.808137 22961 1 76 0.00207241 166 0 7.27157e+07 0.0264916 359260 7.31983e+07 3.34551e+06 22989 3.62266e+07 0 0.165099 0.993406 0.802808 7.27157e+07 0.00283915 1.59248e+07 6.39391e+06 1.60368e+07 175 1.60349e+07 1.2455e+07 0.0024552 1.60336e+07 49.998 0.00490803 0.994923 0 50.1752 GTEX-Q734-1426-SM-DTXFX 2 B1 6 ~8x2.5mm pieces. Squamous mucosa is ~ 5-7% of thickness 8.6 Vagina Vagina 0000996 112 1084 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.993631 608651 0.976995 0.994554 0.799613 23043 1 76 0.00216463 171 0 8.03534e+07 0.0226642 444458 8.07934e+07 4.26425e+06 23063 4.00306e+07 0 0.177382 0.994554 0.795258 8.03534e+07 0.00261167 1.81137e+07 9.62212e+06 1.81295e+07 180 1.82497e+07 1.53164e+07 0.00238795 1.80667e+07 49.748 0.00550117 0.995477 0 50.0218 GTEX-Q734-1626-SM-48U1B 1 B1 2 aliquots ~10x3mm. Trace minute glands, adenomyosis. 7.1 Uterus Uterus 0000995 117 1079 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992241 210197 0.969239 0.993745 0.775656 23042 1 76 0.00201653 165 0 7.74264e+07 0.0304836 328894 7.79138e+07 3.76521e+06 23070 3.85783e+07 0 0.193583 0.993745 0.770804 7.74264e+07 0.00261906 1.70026e+07 6.98092e+06 1.71138e+07 185 1.71308e+07 1.30153e+07 0.00231734 1.70957e+07 49.9488 0.00422126 0.995249 0 50.1629 GTEX-Q734-1826-SM-2I3EL 1 B1 2 ~8.5x6mm aliquots. Areas of under/poor fixation centrally 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 127 1069 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.880802 105517 0.977501 0.883352 0.81998 23193 1 76 0.00260214 164 0 7.99731e+07 0.0221484 539678 9.05337e+07 1.01527e+07 23222 3.97469e+07 0 0.157521 0.883352 0.724331 7.99731e+07 0.00402978 1.7686e+07 6.93437e+06 1.79468e+07 197 1.80349e+07 1.54419e+07 0.0033139 1.78138e+07 49.6916 0.00596107 0.885903 0 50.366 GTEX-Q734-1826-SM-2IZIA 1 B1 2 ~8.5x6mm aliquots. Areas of under/poor fixation centrally 8.3 Adipose Tissue Adipose - Subcutaneous 0002190 127 1069 BP-20044 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q734-1926-SM-2I5EV 0 B1 6 pieces, ~8x3mm. Squamous epithelium is ~1.5-2% of thickness 5.4 Skin Skin - Sun Exposed (Lower leg) 0004264 130 1066 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.649112 201864 0.962641 0.654195 0.789186 23343 1 76 0.00322005 97 0 5.8598e+07 0.0371023 647009 8.95726e+07 1.84205e+07 23360 2.88958e+07 0 0.173454 0.654195 0.516282 5.8598e+07 0.0109114 1.25823e+07 1.22389e+07 1.29076e+07 118 1.30444e+07 7.78585e+06 0.00703582 1.28484e+07 49.6216 0.00722329 0.659279 0 50.6382 GTEX-Q734-1926-SM-2IZIV 0 B1 6 pieces, ~8x3mm. Squamous epithelium is ~1.5-2% of thickness 5.4 Skin Skin - Sun Exposed (Lower leg) 0004264 130 1066 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-Q734-2026-SM-2QU4S 1 B1 2 ~9x7mm aliquots, one fragmented. Poorly fixed. 8.5 Muscle Muscle - Skeletal 0011907 135 1061 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q734-2026-SM-3GADA 1 B1 2 ~9x7mm aliquots, one fragmented. Poorly fixed. 8.5 Muscle Muscle - Skeletal 0011907 135 1061 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.889564 318118 0.971715 0.89551 0.846617 20886 1 76 0.00238432 136 0 7.66625e+07 0.0280295 606853 8.56077e+07 1.24326e+07 20899 3.79848e+07 0 0.125099 0.89551 0.758153 7.66625e+07 0.00981168 1.61326e+07 1.29956e+07 1.65754e+07 160 1.67287e+07 1.45588e+07 0.00607335 1.64489e+07 49.5782 0.00708877 0.901455 0 50.677 GTEX-Q734-2226-SM-2QU4H 1 B1 2 ~4x2mm aliquots. ~50% of aliquots are peri-arterial connective tissue, fat, small vessels 8.4 Blood Vessel Artery - Tibial 0007610 141 1055 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-Q734-2226-SM-3GAD9 1 B1 2 ~4x2mm aliquots. ~50% of aliquots are peri-arterial connective tissue, fat, small vessels 8.4 Blood Vessel Artery - Tibial 0007610 141 1055 BP-20047 RNA isolation_PAXgene Tissue miRNA 11/10/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.863404 210566 0.973634 0.867167 0.816303 23949 1 76 0.00251948 186 0 1.04319e+08 0.0259933 278703 1.20298e+08 1.73689e+07 23981 5.1782e+07 0 0.157331 0.867167 0.707871 1.04319e+08 0.00911776 2.26487e+07 9.75204e+06 2.29787e+07 216 2.31195e+07 1.90523e+07 0.0058043 2.29356e+07 49.8004 0.00231677 0.87093 0 50.3616 GTEX-QCQG-0003-SM-2IJGO B1 Blood Whole Blood 0013756 -127 BP-20079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410089_R03C01 GTEX-QCQG-0003-SM-2XK19 B1 Blood Whole Blood 0013756 -127 BP-20079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R02C01 GTEX-QCQG-0003-SM-4X61E B1 Blood Whole Blood 0013756 -127 BP-20079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2011 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-QCQG-0003-SM-5JK44 B1 Blood Whole Blood 0013756 -127 BP-20079 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/14/2011 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-QCQG-0006-SM-2IZJN B1 8.2 Blood Whole Blood 0013756 -127 BP-20111 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-0006-SM-2S1OW B1 8.2 Blood Whole Blood 0013756 -127 BP-20111 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.293617 263486 0.906266 0.295028 0.712119 15882 1 76 0.00305261 99 0 1.79851e+07 0.09308 67723 6.09607e+07 1.18119e+07 15884 8.819e+06 0 0.194147 0.295028 0.210095 1.79851e+07 0.0185199 3.58514e+06 1.48987e+07 3.80301e+06 111 3.83819e+06 2.9776e+06 0.0107493 3.62034e+06 48.5395 0.00111093 0.296439 0 51.4745 GTEX-QCQG-0006-SM-5SI8M B1 8.2 Blood Whole Blood 0013756 -127 BP-20111 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989642 799744 0.95426 0.99236 0.796099 19010 1 76 0.0025128 131 0 7.35908e+07 0.0451419 309250 7.41573e+07 7.3844e+06 19024 3.65929e+07 0 0.158162 0.99236 0.790017 7.35908e+07 0.00393223 1.57663e+07 3.21485e+07 1.60211e+07 151 1.60583e+07 1.44006e+07 0.00322057 1.59345e+07 49.8064 0.00417019 0.995078 0 50.4009 GTEX-QCQG-0006-SM-DIPE5 B1 8.2 Blood Whole Blood 0013756 -127 BP-20111 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2011 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992834 1.03705e+06 0.957655 0.994134 0.803007 19541 1 76 0.002649 194 0 9.6582e+07 0.0418376 447186 9.71519e+07 7.3159e+06 19558 4.80979e+07 0 0.154649 0.994134 0.798297 9.6582e+07 0.00393595 2.09131e+07 3.77224e+07 2.09586e+07 208 2.10267e+07 1.90907e+07 0.00329163 2.09809e+07 49.9454 0.00460296 0.995435 0 50.0544 GTEX-QCQG-0008-SM-48U2G B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 301 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991742 341584 0.976962 0.993917 0.845711 21480 1 76 0.00175343 184 0 7.64851e+07 0.0226919 224896 7.69532e+07 3.76606e+06 21498 3.80895e+07 0 0.13125 0.993917 0.840567 7.64851e+07 0.00236441 1.70397e+07 9.23761e+06 1.7178e+07 184 1.72595e+07 1.80603e+07 0.00205825 1.71188e+07 49.7953 0.0029225 0.996092 0 50.2021 GTEX-QCQG-0126-SM-48U27 1 B1 2 pieces, 7x3 mm, cortex 8.7 Adrenal Gland Adrenal Gland 0002369 151 1127 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992604 208310 0.976737 0.994341 0.843971 21545 1 76 0.00207567 128 0 6.32278e+07 0.0229186 1.223e+06 6.35876e+07 3.13226e+06 21564 3.15023e+07 0 0.132766 0.994341 0.839195 6.32278e+07 0.00275872 1.39742e+07 7.43458e+06 1.40983e+07 157 1.41137e+07 1.07592e+07 0.0024166 1.4057e+07 49.8993 0.0192333 0.996078 0 50.2212 GTEX-QCQG-0226-SM-48U28 1 B1 2 pieces, 8x7 & 8x6 mm, no congestion 6.6 Spleen Spleen 0002106 152 1127 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990789 254944 0.959802 0.992522 0.805792 23297 1 76 0.00311659 130 0 6.08011e+07 0.0394743 469563 6.12592e+07 2.9649e+06 23314 3.02584e+07 0 0.15401 0.992522 0.799766 6.08011e+07 0.00379648 1.32668e+07 9.59642e+06 1.33376e+07 145 1.33393e+07 8.44504e+06 0.00345594 1.33681e+07 50.0539 0.00766519 0.994255 0 50.1331 GTEX-QCQG-0326-SM-2I3ES 1 B1 2 pieces, 11x6 & 9x9 mm; no inflammation 7.7 Lung Lung 0008952 200 1079 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.816916 82168 0.971552 0.819705 0.784536 24007 1 76 0.00265297 140 0 7.01111e+07 0.0280994 422020 8.55321e+07 9.1436e+06 24043 3.48033e+07 0 0.187016 0.819705 0.643089 7.01111e+07 0.00440304 1.53713e+07 5.83828e+06 1.56792e+07 151 1.57375e+07 1.18294e+07 0.00352503 1.5534e+07 49.6747 0.00493406 0.822495 0 50.4958 GTEX-QCQG-0326-SM-2IZIH 1 B1 2 pieces, 11x6 & 9x9 mm; no inflammation 7.7 Lung Lung 0008952 200 1079 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-0426-SM-48U29 1 B1 2 pieces, 8x8 & 10x8 mm, 10-20% embedded fat 7.2 Pancreas Pancreas 0001150 204 1076 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991869 380457 0.977601 0.99371 0.847105 21778 1 76 0.00185934 108 0 6.62513e+07 0.0221686 255701 6.66707e+07 3.2981e+06 21792 3.29613e+07 0 0.130495 0.99371 0.841777 6.62513e+07 0.00251037 1.50627e+07 1.33564e+07 1.5153e+07 118 1.5191e+07 1.83074e+07 0.00218425 1.51469e+07 49.9273 0.00383528 0.995551 0 50.1495 GTEX-QCQG-0526-SM-48U2A 1 B1 7 pieces up to 10x4 mm; mucosa ~1 mm thick 8.1 Stomach Stomach 0000945 207 1073 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99002 321561 0.976182 0.992146 0.833575 22760 1 76 0.0022596 215 0 7.38705e+07 0.0232285 574814 7.44552e+07 3.78733e+06 22772 3.67441e+07 0 0.142608 0.992146 0.827028 7.38705e+07 0.00292932 1.66927e+07 2.3119e+07 1.67369e+07 190 1.67824e+07 1.47175e+07 0.00259374 1.67958e+07 50.0199 0.00772026 0.994272 0 50.0661 GTEX-QCQG-0626-SM-48U21 1 B1 5 pieces ~7x3mm, all with good epithelium 9.4 Esophagus Esophagus - Mucosa 0006920 215 1066 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990751 218212 0.97661 0.992882 0.84038 22446 1 76 0.00209381 214 0 8.07226e+07 0.0229961 485564 8.13014e+07 4.06373e+06 22462 4.01992e+07 0 0.13623 0.992882 0.834398 8.07226e+07 0.00275001 1.81128e+07 9.67526e+06 1.82436e+07 217 1.83068e+07 1.63682e+07 0.00242121 1.82117e+07 49.8698 0.0059724 0.995013 0 50.1798 GTEX-QCQG-0726-SM-48U1Z 1 B1 5 pieces up to 7x5mm 7.6 Esophagus Esophagus - Muscularis 0004648 218 1063 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.992546 475627 0.974646 0.993492 0.840317 23225 1 76 0.00233878 377 0 1.21469e+08 0.0251163 1.06466e+06 1.22264e+08 9.18056e+06 23248 6.05326e+07 0 0.134329 0.993492 0.834848 1.21469e+08 0.00278667 2.63202e+07 1.14803e+07 2.66869e+07 356 2.65956e+07 2.0436e+07 0.00256251 2.65272e+07 49.9357 0.00870783 0.994437 0 50.3459 GTEX-QCQG-1226-SM-48U23 1 B1 6 pieces, up to 11x5.5 mm; atrophic epithelium 8.4 Vagina Vagina 0000996 233 1052 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991551 192170 0.973195 0.993365 0.800467 23797 1 76 0.00215609 140 0 6.5969e+07 0.0263448 171095 6.64096e+07 3.3267e+06 23819 3.28543e+07 0 0.172728 0.993365 0.795156 6.5969e+07 0.00287432 1.46618e+07 6.5201e+06 1.47846e+07 146 1.48329e+07 1.23981e+07 0.00251455 1.47279e+07 49.8224 0.00257636 0.995179 0 50.2085 GTEX-QCQG-1326-SM-48U24 1 B1 2 pieces up to ~8x3mm, atrophic endometrium 8 Uterus Uterus 0000995 234 1051 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991384 192320 0.966631 0.993059 0.778387 23037 1 76 0.00207637 132 0 6.32719e+07 0.0331271 137262 6.37142e+07 3.16153e+06 23066 3.15195e+07 0 0.188244 0.993059 0.772984 6.32719e+07 0.00274872 1.38588e+07 6.69207e+06 1.39998e+07 142 1.40215e+07 1.05076e+07 0.00241198 1.39369e+07 49.8489 0.00215434 0.994734 0 50.253 GTEX-QCQG-1426-SM-48U22 1 B1 2 pieces each ~10x4.5mm; corpora, no ova 7.7 Ovary Ovary 0000992 236 1050 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992251 167028 0.973353 0.993856 0.795112 22518 1 76 0.00194641 135 0 6.09702e+07 0.0263923 172938 6.13471e+07 2.73117e+06 22545 3.0379e+07 0 0.178241 0.993856 0.790227 6.09702e+07 0.00255079 1.346e+07 5.67015e+06 1.35613e+07 140 1.35825e+07 1.10182e+07 0.00224811 1.35329e+07 49.9084 0.00281901 0.995461 0 50.1876 GTEX-QCQG-1526-SM-48U25 1 B1 6 pieces ~9x1.5mm; no plaques 7.1 Blood Vessel Artery - Aorta 0001496 240 1046 BP-20113 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992206 222708 0.975358 0.993929 0.840319 22910 1 76 0.00203751 206 0 7.92216e+07 0.0243413 311162 7.97055e+07 3.85464e+06 22931 3.94688e+07 0 0.135039 0.993929 0.835218 7.92216e+07 0.00271287 1.73123e+07 6.87206e+06 1.74794e+07 222 1.74832e+07 1.46936e+07 0.00237461 1.74379e+07 49.9351 0.0039039 0.995652 0 50.2402 GTEX-QCQG-1626-SM-48U26 2 B1 6 pieces up to ~11x4.7 mm 6.8 Colon Colon - Transverse 0001157 250 1037 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989882 209646 0.972739 0.991801 0.824761 23169 1 76 0.00250578 167 0 7.24642e+07 0.0258732 1.07922e+06 7.30633e+07 3.59883e+06 23187 3.60417e+07 0 0.147978 0.991801 0.817998 7.24642e+07 0.00321461 1.60945e+07 9.21002e+06 1.62603e+07 191 1.62393e+07 1.05758e+07 0.00285951 1.62359e+07 49.9948 0.0147711 0.993719 0 50.2562 GTEX-QCQG-1726-SM-2QU57 1 B1 6 pieces, up to 9x3.6 mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 298 989 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-1726-SM-3GIJ9 1 B1 6 pieces, up to 9x3.6 mm 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 298 989 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.765314 79361 0.970653 0.768396 0.805769 22037 1 76 0.00279949 174 0 4.68125e+07 0.0290223 248872 6.09224e+07 5.86328e+06 22061 2.31862e+07 0 0.164884 0.768396 0.61915 4.68125e+07 0.00805786 1.01066e+07 4.31032e+06 1.02325e+07 170 1.01994e+07 7.50472e+06 0.00541813 1.03178e+07 50.2885 0.00408507 0.771477 0 50.3093 GTEX-QCQG-1826-SM-2QU2R 1 B1 2 pieces, ~10x10 mm; large central defects, probably fixation artifacts 7 Adipose Tissue Adipose - Subcutaneous 0002190 305 983 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-1826-SM-2S1P2 1 B1 2 pieces, ~10x10 mm; large central defects, probably fixation artifacts 7 Adipose Tissue Adipose - Subcutaneous 0002190 305 983 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.865418 217056 0.964224 0.870865 0.768625 23484 1 76 0.00286507 118 0 7.34426e+07 0.0354888 349265 8.43329e+07 6.38269e+06 23513 3.63544e+07 0 0.195599 0.870865 0.669369 7.34426e+07 0.0167893 1.58784e+07 1.21969e+07 1.61266e+07 131 1.63368e+07 1.06717e+07 0.00978363 1.60647e+07 49.5801 0.0041415 0.876312 0 50.3877 GTEX-QCQG-1926-SM-2QU3U 1 B1 2 pieces, each ~2.5x3.5 mm; minimal adipose 7.6 Blood Vessel Artery - Tibial 0007610 310 978 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-1926-SM-2S1PI 1 B1 2 pieces, each ~2.5x3.5 mm; minimal adipose 7.6 Blood Vessel Artery - Tibial 0007610 310 978 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.292981 14912 0.972834 0.298723 0.813516 17844 1 76 0.00274774 100 0 1.71314e+07 0.0266749 60145 5.73488e+07 7.63225e+06 17847 8.32741e+06 0 0.159318 0.298723 0.243016 1.71314e+07 0.0186215 3.58619e+06 1.5617e+06 3.70413e+06 106 3.84579e+06 3.09248e+06 0.0105321 3.73892e+06 49.2955 0.00104876 0.304464 0 50.8089 GTEX-QCQG-1926-SM-5SI7Q 1 B1 2 pieces, each ~2.5x3.5 mm; minimal adipose 7.6 Blood Vessel Artery - Tibial 0007610 310 978 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991348 341064 0.973343 0.993908 0.826149 22695 1 76 0.00201844 279 0 9.24544e+07 0.0262751 323960 9.30211e+07 8.1522e+06 22718 4.6002e+07 0 0.147194 0.993908 0.821117 9.24544e+07 0.00316355 1.9925e+07 8.96319e+06 2.00718e+07 273 2.00765e+07 1.72117e+07 0.00258952 2.0148e+07 50.0888 0.00348265 0.996469 0 50.1835 GTEX-QCQG-2026-SM-2QU3K 1 B1 2 pieces , each 3.8x3mm; minimal adipose 8 Nerve Nerve - Tibial 0001323 312 977 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-2026-SM-2S1PH 1 B1 2 pieces , each 3.8x3mm; minimal adipose 8 Nerve Nerve - Tibial 0001323 312 977 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.503944 53089 0.965802 0.504992 0.754723 23051 1 76 0.00269683 120 0 5.09568e+07 0.0338301 172470 1.00906e+08 8.19606e+06 23084 2.51646e+07 0 0.211079 0.504992 0.381129 5.09568e+07 0.0166223 1.11195e+07 4.52793e+06 1.13189e+07 114 1.13264e+07 7.93603e+06 0.00964509 1.11843e+07 49.6845 0.00170921 0.50604 0 50.4444 GTEX-QCQG-2126-SM-2QU35 1 B1 2 pieces up to ~11x6mm 7.9 Muscle Muscle - Skeletal 0011907 315 974 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QCQG-2126-SM-2S1P8 1 B1 2 pieces up to ~11x6mm 7.9 Muscle Muscle - Skeletal 0011907 315 974 BP-20114 RNA isolation_PAXgene Tissue miRNA 11/15/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.710025 83713 0.977448 0.714076 0.8574 19681 1 76 0.00248038 114 0 7.01273e+07 0.0222582 716405 9.8207e+07 7.66535e+06 19690 3.47364e+07 0 0.120049 0.714076 0.612249 7.01273e+07 0.0164832 1.49031e+07 8.31553e+06 1.53779e+07 131 1.54428e+07 1.27625e+07 0.00944208 1.51615e+07 49.5404 0.00729484 0.718127 0 50.7841 GTEX-QCQG-2126-SM-DTXFV 1 B1 2 pieces up to ~11x6mm 8.2 Muscle Muscle - Skeletal 0011907 315 974 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10503 03/19/2017 TruSeq.v1 RNASEQ 0.994778 807071 0.983086 0.995691 0.875568 19640 1 76 0.00185412 276 0 9.28712e+07 0.0166833 839218 9.32731e+07 4.49118e+06 19651 4.62662e+07 0 0.107517 0.995691 0.871796 9.28712e+07 0.00223232 2.0233e+07 1.06739e+07 2.05593e+07 271 2.062e+07 1.92529e+07 0.00204305 2.02427e+07 49.5384 0.00899743 0.996604 0 50.4 GTEX-QDT8-0006-SM-2XV5I C1 8.1 Blood Whole Blood 0013756 330 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0006-SM-32PL3 C1 8.1 Blood Whole Blood 0013756 330 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 LCSET-1665 09/12/2012 TruSeq.v1 EXCLUDE 0.285512 55859 0.96817 0.296239 0.789761 18184 1 76 0.00336757 116 0 1.62617e+07 0.0313242 93148 5.48937e+07 1.04946e+07 18188 7.69413e+06 0 0.178409 0.296239 0.233958 1.62617e+07 0.0126389 3.51097e+06 9.34323e+06 3.52610e+06 125 3.78659e+06 3.26732e+06 0.00783538 3.79673e+06 50.0668 0.00169688 0.306967 0 50.1075 GTEX-QDT8-0006-SM-5SI8N C1 8.1 Blood Whole Blood 0013756 330 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.981778 626101 0.965801 0.984886 0.780605 19240 1 76 0.00254163 113 0 7.16279e+07 0.0332071 106392 7.27271e+07 7.51805e+06 19245 3.55801e+07 0 0.185197 0.984886 0.768806 7.16279e+07 0.00421725 1.60681e+07 7.65548e+07 1.6262e+07 126 1.63123e+07 1.63839e+07 0.0033768 1.62602e+07 49.92 0.00146289 0.987993 0 50.2999 GTEX-QDT8-0006-SM-CXZJC C1 8.1 Blood Whole Blood 0013756 330 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.985377 649642 0.969997 0.986913 0.785875 19867 1 76 0.00237962 142 0 9.60913e+07 0.0292952 129485 9.73655e+07 5.61841e+06 19881 4.78461e+07 0 0.184121 0.986913 0.775591 9.60913e+07 0.00377 2.16594e+07 9.09033e+07 2.19791e+07 166 2.20185e+07 2.27906e+07 0.00307373 2.1784e+07 49.7322 0.00132989 0.988449 0 50.3662 GTEX-QDT8-0008-SM-48U2F C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 448 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992475 325727 0.978153 0.994003 0.84968 20363 1 76 0.00169226 160 0 7.38455e+07 0.0214877 314349 7.4291e+07 3.54832e+06 20379 3.6797e+07 0 0.128473 0.994003 0.844585 7.38455e+07 0.00228341 1.65137e+07 9.98638e+06 1.66504e+07 160 1.67027e+07 1.8994e+07 0.00198738 1.65715e+07 49.8029 0.00423132 0.995531 0 50.206 GTEX-QDT8-0011-R10A-SM-32PKG C1, A1 9 Brain Brain - Frontal Cortex (BA9) 0009834 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.94767 274384 0.962328 0.950783 0.820723 25862 1 76 0.00225663 519 0 1.29082e+08 0.0370734 2.90802e+06 1.35763e+08 1.25697e+07 25903 6.40821e+07 0 0.141605 0.950783 0.78033 1.29082e+08 0.00647788 2.82573e+07 8.72238e+06 2.83307e+07 485 2.8387e+07 1.7438e+07 0.00436034 2.85785e+07 50.1681 0.0214197 0.953897 0 50.0649 GTEX-QDT8-0011-R11A-SM-32PKD C1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.924035 405563 0.945946 0.927288 0.715753 26089 1 76 0.002443 520 0 1.48768e+08 0.0535927 1.81205e+06 1.60433e+08 1.52238e+07 26149 7.38163e+07 0 0.230193 0.927288 0.663708 1.48768e+08 0.0067617 3.19636e+07 1.31741e+07 3.20676e+07 471 3.21733e+07 1.79718e+07 0.00459477 3.2323e+07 50.116 0.0112947 0.93054 0 50.0812 GTEX-QDT8-0011-R1A-SM-32PKS C1, A1 6.2 Brain Brain - Hippocampus 0001954 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.614424 75789 0.970906 0.620568 0.852326 22632 1 76 0.00247346 126 0 5.281e+07 0.0286826 3.37387e+06 8.50994e+07 1.14661e+07 22649 2.60263e+07 0 0.118579 0.620568 0.528927 5.281e+07 0.00773689 1.15977e+07 4.92167e+06 1.17784e+07 149 1.196e+07 6.13513e+06 0.00507912 1.18976e+07 49.8693 0.0396462 0.626713 0 50.3864 GTEX-QDT8-0011-R2A-SM-32PKQ C1, A1 7.1 Brain Brain - Substantia nigra 0002038 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.826102 140809 0.968108 0.83083 0.839974 25365 1 76 0.00234465 373 0 1.17098e+08 0.0314869 5.46961e+06 1.40941e+08 1.81741e+07 25408 5.80201e+07 0 0.128134 0.83083 0.697876 1.17098e+08 0.00659709 2.58208e+07 9.84586e+06 2.60487e+07 427 2.61446e+07 1.4202e+07 0.00445877 2.6328e+07 50.1747 0.0388078 0.835559 0 50.2197 GTEX-QDT8-0011-R3A-SM-32PKR C1, A1 6.6 Brain Brain - Anterior cingulate cortex (BA24) 0009835 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.954203 263000 0.971127 0.957934 0.849635 25751 1 76 0.00252119 519 0 1.52356e+08 0.0284599 1.01124e+07 1.59046e+08 1.69668e+07 25795 7.55971e+07 0 0.121492 0.957934 0.813894 1.52356e+08 0.0072445 3.38587e+07 1.46524e+07 3.38926e+07 546 3.3807e+07 1.69899e+07 0.00487364 3.44638e+07 50.481 0.0635814 0.961665 0 50.025 GTEX-QDT8-0011-R4A-SM-32PKM C1, A1 7.3 Brain Brain - Amygdala 0001876 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.618002 193401 0.966737 0.620453 0.831062 24700 1 76 0.00245397 373 0 1.12796e+08 0.0328183 8.05452e+06 1.81797e+08 2.02875e+07 24740 5.59337e+07 0 0.135675 0.620453 0.515635 1.12796e+08 0.00672817 2.48159e+07 1.03484e+07 2.52562e+07 429 2.52148e+07 1.18086e+07 0.00458263 2.52673e+07 50.052 0.0443051 0.622904 0 50.4397 GTEX-QDT8-0011-R5A-SM-32PKN C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.877619 157493 0.972076 0.882761 0.847889 24166 1 76 0.00244159 371 0 1.10971e+08 0.0276821 1.02848e+07 1.25709e+08 1.44503e+07 24190 5.49935e+07 0 0.124188 0.882761 0.748482 1.10971e+08 0.00713244 2.45539e+07 1.41632e+07 2.47985e+07 403 2.48217e+07 9.94866e+06 0.00477335 2.50854e+07 50.2642 0.081814 0.887902 0 50.2479 GTEX-QDT8-0011-R6A-SM-32PKI C1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.889435 211249 0.970466 0.892231 0.846643 25825 1 76 0.00242278 520 0 1.5219e+08 0.0292298 1.2738e+07 1.70573e+08 1.75168e+07 25875 7.56252e+07 0 0.123822 0.892231 0.755402 1.5219e+08 0.00648703 3.36711e+07 1.6191e+07 3.41723e+07 499 3.40843e+07 1.49986e+07 0.00444854 3.41572e+07 50.0534 0.074678 0.895027 0 50.3694 GTEX-QDT8-0011-R7A-SM-32PKF C1, A1 8.9 Brain Brain - Putamen (basal ganglia) 0001874 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.957861 271923 0.960299 0.961382 0.814156 26275 1 76 0.00242104 518 0 1.41106e+08 0.0393242 5.70574e+06 1.46774e+08 1.36033e+07 26329 7.00435e+07 0 0.146143 0.961382 0.782715 1.41106e+08 0.00690711 3.08211e+07 1.21066e+07 3.09464e+07 540 3.09557e+07 1.64276e+07 0.00465586 3.12638e+07 50.2476 0.0388744 0.964903 0 50.1014 GTEX-QDT8-0011-R8A-SM-32PKE C1, A1 7.2 Brain Brain - Hypothalamus 0001898 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.318479 34297 0.962453 0.327859 0.816657 20052 1 76 0.00295033 114 0 2.0345e+07 0.0372046 1.21818e+06 6.20541e+07 9.63859e+06 20060 9.81128e+06 0 0.145797 0.327859 0.267749 2.0345e+07 0.010505 4.3223e+06 2.55983e+06 4.44511e+06 123 4.68602e+06 2.1155e+06 0.00661959 4.63334e+06 49.7174 0.019631 0.33724 0 50.7004 GTEX-QDT8-0011-R9A-SM-32PKH C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-1665 09/12/2012 TruSeq.v1 EXCLUDE 0.151971 18452 0.960513 0.156343 0.793707 18969 1 76 0.00294407 132 0 1.35097e+07 0.0389357 277476 8.64108e+07 1.64354e+07 18975 6.41827e+06 0 0.166805 0.156343 0.12409 1.35097e+07 0.0113632 2.87646e+06 1.62638e+06 2.96843e+06 123 3.11302e+06 1.8656e+06 0.00703594 3.08264e+06 49.7548 0.00321113 0.160715 0 50.7868 GTEX-QDT8-0011-R9A-SM-5SI8J C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990638 392050 0.958522 0.993563 0.79901 23187 1 76 0.00200934 173 0 6.63871e+07 0.041077 1.25005e+06 6.68173e+07 6.65744e+06 23210 3.30101e+07 0 0.159512 0.993563 0.793867 6.63871e+07 0.00323708 1.46561e+07 9.78009e+06 1.48559e+07 173 1.47659e+07 9.64382e+06 0.00262141 1.49362e+07 50.2867 0.0187085 0.996487 0 50.3386 GTEX-QDT8-0011-R9A-SM-CYPRD C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 370 BP-20394 RNA isolation_PAXgene Tissue miRNA 11/29/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995153 449768 0.960691 0.995941 0.806482 23843 1 76 0.00228895 235 0 8.0197e+07 0.0388913 1.60538e+06 8.05238e+07 5.93397e+06 23866 3.99802e+07 0 0.154209 0.995941 0.803209 8.0197e+07 0.00276624 1.77759e+07 1.05351e+07 1.80708e+07 223 1.79405e+07 1.23197e+07 0.0025274 1.79672e+07 50.0372 0.0199367 0.996728 0 50.4113 GTEX-QDT8-0126-SM-48TZ1 1 C1 6 ~7x1.5mm pieces. Squamous epithelium is ~ 2-4% of thickness% 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 446 731 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.987261 194940 0.969946 0.989199 0.773268 23687 1 76 0.00223584 159 0 7.05607e+07 0.0298524 479381 7.13312e+07 3.49903e+06 23713 3.51175e+07 0 0.196678 0.989199 0.764916 7.05607e+07 0.003004 1.54636e+07 7.10983e+06 1.55568e+07 168 1.55658e+07 1.03247e+07 0.00261917 1.55847e+07 50.0303 0.0067205 0.991137 0 50.1501 GTEX-QDT8-0126-SM-CKJTD 1 C1 6 ~7x1.5mm pieces. Squamous epithelium is ~ 2-4% of thickness% Skin Skin - Sun Exposed (Lower leg) 0004264 446 731 BP-68788 DNA Extraction from Paxgene-derived Lysate Plate Based 11/06/2015 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-QDT8-0226-SM-2XV5J 1 C1 2 ~8x7mm aliquots, focal areas centrally are under-fixed 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 450 728 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0226-SM-32PL4 1 C1 2 ~8x7mm aliquots, focal areas centrally are under-fixed 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 450 728 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.955388 221348 0.972157 0.958724 0.754015 25071 1 76 0.00249584 521 0 1.45313e+08 0.0275762 979576 1.5157e+08 1.62079e+07 25140 7.21557e+07 0 0.218141 0.958724 0.722892 1.45313e+08 0.00675688 3.18385e+07 1.27824e+07 3.19895e+07 455 3.19871e+07 2.08664e+07 0.00461894 3.23185e+07 50.2576 0.00646287 0.962059 0 50.1183 GTEX-QDT8-0326-SM-2XV4W 1 C1 2 ~6.5x3.5mm aliquots. ~0.5mm rim of fat around both. 6.7 Nerve Nerve - Tibial 0001323 472 707 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0326-SM-32PL1 1 C1 2 ~6.5x3.5mm aliquots. ~0.5mm rim of fat around both. 6.7 Nerve Nerve - Tibial 0001323 472 707 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.978877 235647 0.96563 0.982105 0.733213 26032 1 76 0.00248895 526 0 1.53093e+08 0.0340605 628520 1.55882e+08 1.50796e+07 26110 7.60251e+07 0 0.232417 0.982105 0.720092 1.53093e+08 0.00662826 3.34648e+07 1.23169e+07 3.35765e+07 483 3.36044e+07 2.09954e+07 0.0045518 3.3912e+07 50.2278 0.00403202 0.985333 0 50.0833 GTEX-QDT8-0426-SM-2XV4J 1 C1 2 ~2.5x1.5mm aliquots 7 Blood Vessel Artery - Tibial 0007610 474 706 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0426-SM-32PKZ 1 C1 2 ~2.5x1.5mm aliquots 7 Blood Vessel Artery - Tibial 0007610 474 706 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.942182 163489 0.973778 0.945142 0.834396 23577 1 76 0.0023824 521 0 1.43713e+08 0.0258126 649218 1.52054e+08 1.74982e+07 23619 7.13816e+07 0 0.139382 0.945142 0.788623 1.43713e+08 0.00659253 3.10198e+07 1.11823e+07 3.11004e+07 474 3.10827e+07 2.60282e+07 0.00448087 3.14667e+07 50.307 0.00426966 0.948103 0 50.0649 GTEX-QDT8-0526-SM-2XV5Q 1 C1 2 ~8x6mm pieces, ~5% interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 507 674 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0526-SM-32PL5 1 C1 2 ~8x6mm pieces, ~5% interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 507 674 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 EXCLUDE 0.606638 120111 0.978124 0.609539 0.837818 21042 1 76 0.00230993 167 0 8.26908e+07 0.0216344 1.11843e+06 1.35661e+08 1.57417e+07 21068 4.09181e+07 0 0.140306 0.609539 0.510682 8.26908e+07 0.00700059 1.78474e+07 7.37215e+06 1.80162e+07 200 1.79675e+07 1.39272e+07 0.00464409 1.82463e+07 50.385 0.00824428 0.61244 0 50.2353 GTEX-QDT8-0526-SM-3NMD8 1 C1 2 ~8x6mm pieces, ~5% interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 507 674 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992427 229919 0.978914 0.994579 0.85205 21922 1 76 0.00273804 274 0 1.04164e+08 0.0208784 1.19367e+06 1.04732e+08 1.27472e+07 21942 5.18709e+07 0 0.126864 0.994579 0.847431 1.04164e+08 0.00396021 2.27983e+07 1.14434e+07 2.28316e+07 310 2.28104e+07 1.97814e+07 0.00334781 2.3024e+07 50.233 0.0113974 0.99673 0 50.0365 GTEX-QDT8-0526-SM-4LMJR 1 C1 2 ~8x6mm pieces, ~5% interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 507 674 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3631 08/07/2013 TruSeq.v1 EXCLUDE 0.988418 378024 0.980345 0.992055 0.854877 21222 1 76 0.00226896 272 0 9.29689e+07 0.0194611 1.1029e+06 9.37135e+07 7.48424e+06 21236 4.62104e+07 0 0.125467 0.992055 0.848085 9.29689e+07 0.00298039 2.01471e+07 1.3014e+07 2.0424e+07 280 2.04254e+07 1.70111e+07 0.00262337 2.0454e+07 50.035 0.0117688 0.995691 0 50.3413 GTEX-QDT8-0626-SM-48TYW 1 C1 2 ~10x8mm pieces, both with atrophic TDLUs, one with more adipose tissue; the other with more stroma 7.4 Breast Breast - Mammary Tissue 0008367 530 652 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.98945 165953 0.970087 0.991135 0.747471 23489 1 76 0.00256712 119 0 5.82451e+07 0.0283242 141198 5.87661e+07 2.7082e+06 23515 2.89614e+07 0 0.222615 0.991135 0.740845 5.82451e+07 0.00319794 1.28351e+07 6.2946e+06 1.28952e+07 123 1.29368e+07 9.95638e+06 0.00288199 1.28881e+07 49.9056 0.00240271 0.99282 0 50.1167 GTEX-QDT8-0926-SM-2XV59 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) 6.1 Lung Lung 0008952 581 605 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-QDT8-0926-SM-325A6 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) Lung Lung 0008952 581 605 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003131_R03C01 GTEX-QDT8-0926-SM-325HN 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) Lung Lung 0008952 581 605 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R01C02 GTEX-QDT8-0926-SM-32PL2 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) 6.1 Lung Lung 0008952 581 605 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.462301 76840 0.969478 0.465219 0.700707 23773 1 76 0.0026765 124 0 5.48241e+07 0.0301379 186122 1.17846e+08 1.49363e+07 23811 2.70188e+07 0 0.268771 0.465219 0.325982 5.48241e+07 0.00771649 1.19906e+07 5.37269e+06 1.21171e+07 127 1.22229e+07 7.52468e+06 0.00518069 1.22123e+07 49.9782 0.00157937 0.468136 0 50.2624 GTEX-QDT8-0926-SM-4SVPN 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) Lung Lung 0008952 581 605 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) EXCLUDE GTEX-QDT8-0926-SM-7DRQ9 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) Lung Lung 0008952 581 605 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-QDT8-0926-SM-CLTFX 2 C1 2 ~7x6mm aliquots, evidence of chronic pulmonary congestion (aggregates of hemosiderin-laden macrophages) Lung Lung 0008952 581 605 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-QDT8-1026-SM-43V6X 1 C1 6 ~9x1.5mm pieces, patchy atheromatous deposition 6.2 Blood Vessel Artery - Aorta 0001496 615 573 BP-20205 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991075 218752 0.970814 0.9923 0.810955 22247 1 76 0.00215276 163 0 7.38154e+07 0.0288181 183351 7.43881e+07 3.30064e+06 22269 3.67381e+07 0 0.159859 0.9923 0.804711 7.38154e+07 0.00280812 1.59244e+07 6.55319e+06 1.59897e+07 173 1.59819e+07 1.36478e+07 0.00248003 1.60272e+07 50.0707 0.00246479 0.993526 0 50.1022 GTEX-QDT8-1226-SM-EVR35 1 C1 2 '7x8.5mm aliquots, relatively 'clean' specimens 5.5 Thyroid Thyroid 0002046 625 565 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987367 299009 0.961421 0.989298 0.680998 24979 1 76 0.00246902 207 0 9.98622e+07 0.038294 189481 1.00943e+08 7.36119e+06 25047 4.96885e+07 0 0.280424 0.989298 0.673709 9.98622e+07 0.00380338 2.1667e+07 1.04461e+07 2.18272e+07 229 2.18212e+07 1.38721e+07 0.00313489 2.1854e+07 50.0375 0.00187712 0.991229 0 50.1841 GTEX-QDT8-1326-SM-48TYY 1 C1 6 ~6.5x2.5mm pieces 7 Esophagus Esophagus - Muscularis 0004648 628 566 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991309 191255 0.972485 0.992829 0.806723 22380 1 76 0.00213515 135 0 6.44883e+07 0.0272705 368638 6.4954e+07 3.08931e+06 22405 3.21035e+07 0 0.165762 0.992829 0.800938 6.44883e+07 0.00290694 1.38695e+07 5.23627e+06 1.398e+07 153 1.39817e+07 1.08046e+07 0.00252045 1.39665e+07 49.9728 0.00567537 0.994349 0 50.1984 GTEX-QDT8-1426-SM-EXUR4 2 C1 6 ~6x2mm pieces. Squamous mucosa is unusually poorly preserved with superficial sloughing; it is ~ 5-10% of thickness 5.5 Esophagus Esophagus - Mucosa 0006920 630 565 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10976 05/25/2017 TruSeq.v1 EXCLUDE 0.985774 155630 0.967928 0.985902 0.752327 22876 1 76 0.00191913 107 0 5.01283e+07 0.0317906 177000 5.08451e+07 1.92556e+06 22897 2.49826e+07 0 0.215601 0.985902 0.74172 5.01283e+07 0.00240249 1.09771e+07 5.00821e+06 1.10722e+07 113 1.10227e+07 7.86315e+06 0.00216078 1.1037e+07 50.0323 0.00348116 0.98603 0 50.2156 GTEX-QDT8-1526-SM-EXOHP 2 C1 2 ~7.5x6.5mm aliquots, foci of adherent extraspenic vascular/fibrous tissue present (~4x1mm) 5.5 Spleen Spleen 0002106 633 563 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98387 364779 0.964916 0.985928 0.734633 24588 1 76 0.00316622 167 0 8.98832e+07 0.0325004 303068 9.1166e+07 5.57754e+06 24629 4.45946e+07 0 0.230284 0.985928 0.724295 8.98832e+07 0.00460698 1.98517e+07 1.98191e+07 2.00032e+07 188 2.00414e+07 1.35115e+07 0.00388509 1.99877e+07 49.933 0.00332435 0.987986 0 50.1901 GTEX-QDT8-1726-SM-EYYV6 2 C1 6 ~6.5x3.5mm pieces. Tubules more autolyzed than glomeruli 5.6 Kidney Kidney - Cortex 0001225 636 545 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988268 296340 0.96709 0.990653 0.80011 24820 1 76 0.0023722 271 0 9.92759e+07 0.03267 2.77272e+06 1.00213e+08 3.63638e+06 24852 4.94105e+07 0 0.166979 0.990653 0.792632 9.92759e+07 0.00312437 2.17765e+07 1.46641e+07 2.20359e+07 304 2.19988e+07 1.25025e+07 0.00274738 2.20192e+07 50.0231 0.0276684 0.993038 0 50.296 GTEX-QDT8-2026-SM-EZ6LS 3 C1 6 ~7.5x3mm pieces. Autolyzed mucosa is ~3-45% of thickness 5.9 Stomach Stomach 0000945 645 557 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98753 283936 0.975852 0.989424 0.79818 24429 1 76 0.00267562 292 0 9.43109e+07 0.0238621 542932 9.5319e+07 7.63952e+06 24460 4.69621e+07 0 0.177672 0.989424 0.789739 9.43109e+07 0.00391781 2.08193e+07 1.74012e+07 2.09642e+07 262 2.09821e+07 1.70167e+07 0.00329553 2.09725e+07 49.9886 0.00569595 0.991319 0 50.1734 GTEX-QDT8-2226-SM-EZ6LT 2 C1 2 9x8mm aliquots. Post-menopausal-appearing, remote corpora albicantia present 5.7 Ovary Ovary 0000992 648 556 BP-20206 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98792 171624 0.962798 0.9897 0.701258 22096 1 76 0.00268368 118 0 5.23875e+07 0.0370144 108337 5.29327e+07 3.92525e+06 22132 2.60828e+07 0 0.26154 0.9897 0.694034 5.23875e+07 0.00419067 1.14294e+07 5.50178e+06 1.14484e+07 112 1.1454e+07 8.48806e+06 0.00343582 1.15143e+07 50.1314 0.00204669 0.991479 0 50.0414 GTEX-QDT8-2526-SM-48TYX 2 C1 6 ~7x3mm pieces; squamous mucosa, focally beginning to slough, is ~2-3% of thickness 7.4 Vagina Vagina 0000996 659 549 BP-20207 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989247 197618 0.968434 0.991087 0.696055 24509 1 76 0.0022953 137 0 7.08164e+07 0.031314 192305 7.14532e+07 3.45361e+06 24546 3.52451e+07 0 0.272379 0.991087 0.689851 7.08164e+07 0.00306613 1.56103e+07 6.91215e+06 1.56767e+07 145 1.57139e+07 1.05011e+07 0.00268 1.57037e+07 49.9838 0.00269134 0.992928 0 50.106 GTEX-QDT8-2926-SM-32PKC 1 C1 4 ~6x4mm aliquots. Some have a ~ 0.1mm layer of adherent pia arachnoid 6.5 Brain Brain - Cortex 0001870 694 518 BP-20207 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.903919 554324 0.954185 0.906923 0.815497 24936 1 76 0.00247619 371 0 1.07265e+08 0.0454568 4.99794e+06 1.18274e+08 1.17424e+07 24972 5.32788e+07 0 0.138688 0.906923 0.739594 1.07265e+08 0.00658355 2.33872e+07 2.44271e+07 2.35861e+07 406 2.35529e+07 1.18635e+07 0.00452307 2.37446e+07 50.2026 0.0422574 0.909927 0 50.2116 GTEX-QDT8-3026-SM-32PKB 1 C1 4 ~5x5mm aliquots 7.3 Brain Brain - Cerebellum 0002037 696 516 BP-20207 RNA isolation_PAXgene Tissue miRNA 11/18/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.872707 285179 0.942022 0.876405 0.694377 25038 1 76 0.00260944 205 0 1.08342e+08 0.0576511 1.42163e+06 1.23621e+08 1.23228e+07 25085 5.37326e+07 0 0.247645 0.876405 0.608555 1.08342e+08 0.00699767 2.31957e+07 1.47878e+07 2.32865e+07 250 2.33956e+07 1.21112e+07 0.00479429 2.35085e+07 50.1204 0.0114999 0.880103 0 50.0976 GTEX-QDVJ-0003-SM-2MRI3 C1 Blood Whole Blood 0013756 343 BP-20173 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/17/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321087_R02C01 GTEX-QDVJ-0003-SM-2XK1Y C1 Blood Whole Blood 0013756 343 BP-20173 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/17/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R06C02 GTEX-QDVJ-0003-SM-3USRZ C1 Blood Whole Blood 0013756 343 BP-20173 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/17/2011 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-QDVJ-0003-SM-5URC5 C1 Blood Whole Blood 0013756 343 BP-20173 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 11/17/2011 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QDVJ-0005-SM-2QU5C C1 8.6 Blood Whole Blood 0013756 343 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-0005-SM-2TC5X C1 8.6 Blood Whole Blood 0013756 343 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.855176 1.45028e+06 0.901556 0.861007 0.726033 20346 1 76 0.00360317 102 0 7.01948e+07 0.0969249 304790 8.15264e+07 1.65061e+07 20361 3.47003e+07 0 0.175523 0.861007 0.625119 7.01948e+07 0.0185553 1.44813e+07 9.34985e+07 1.48221e+07 110 1.50042e+07 1.34092e+07 0.0110286 1.47467e+07 49.5673 0.00373855 0.866837 0 50.5816 GTEX-QDVJ-0008-SM-48U2E C1 8.8 Skin Cells - Cultured fibroblasts EFO_0002009 536 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993189 349547 0.972328 0.994732 0.833645 20897 1 76 0.00186225 227 0 7.69969e+07 0.0273147 214230 7.74047e+07 3.83059e+06 20918 3.83667e+07 0 0.138683 0.994732 0.829254 7.69969e+07 0.002457 1.71266e+07 9.37078e+06 1.71926e+07 218 1.72586e+07 1.52852e+07 0.00215916 1.71717e+07 49.8738 0.00276766 0.996275 0 50.0962 GTEX-QDVJ-0226-SM-2I5FV 2 C1 2 pieces 8.6x9.5; nodular hyperplasia and fibrosis 6.2 Thyroid Thyroid 0002046 474 435 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.936408 432281 0.956769 0.942124 0.719524 24875 1 76 0.00329792 202 0 1.05467e+08 0.0429984 1.10934e+06 1.11946e+08 2.1628e+07 24930 5.22443e+07 0 0.237246 0.942124 0.67788 1.05467e+08 0.0101068 2.26098e+07 2.43441e+07 2.31473e+07 235 2.33562e+07 1.25066e+07 0.00668173 2.29477e+07 49.559 0.00990953 0.947839 0 50.5873 GTEX-QDVJ-0226-SM-2M48Z 2 C1 2 pieces 8.6x9.5; nodular hyperplasia and fibrosis 6.2 Thyroid Thyroid 0002046 474 435 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-0426-SM-2I5FW 1 C1 2 pieces 7x7 mm; contraction bands 8.2 Heart Heart - Left Ventricle 0006566 479 431 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.915196 398562 0.975086 0.924507 0.844232 21929 1 76 0.00322036 198 0 9.68981e+07 0.0246755 1.84781e+06 1.04811e+08 2.00027e+07 21942 4.7814e+07 0 0.130855 0.924507 0.780498 9.68981e+07 0.0106875 2.08577e+07 2.55831e+07 2.14765e+07 227 2.16021e+07 1.55927e+07 0.00691634 2.14864e+07 49.8657 0.01763 0.933818 0 50.7309 GTEX-QDVJ-0426-SM-2M491 1 C1 2 pieces 7x7 mm; contraction bands 8.2 Heart Heart - Left Ventricle 0006566 479 431 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-0626-SM-48U1T 1 C1 6 pieces up to 8.5x2 mm 7.8 Blood Vessel Artery - Aorta 0001496 485 427 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991577 230333 0.975373 0.993693 0.833569 21119 1 76 0.00197428 136 0 6.27963e+07 0.0242118 109515 6.31949e+07 3.04417e+06 21137 3.12666e+07 0 0.141804 0.993693 0.828312 6.27963e+07 0.0027137 1.36582e+07 5.18943e+06 1.37929e+07 144 1.38413e+07 1.22137e+07 0.0023432 1.37391e+07 49.8147 0.00173297 0.995809 0 50.2454 GTEX-QDVJ-0726-SM-48U1W 1 C1 5 pieces up to 6x2.6mm; focal parakeratosis 9.2 Esophagus Esophagus - Mucosa 0006920 487 432 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99063 221161 0.976417 0.992543 0.825292 21607 1 76 0.00214545 138 0 6.55278e+07 0.0231768 273553 6.60201e+07 3.21431e+06 21621 3.26359e+07 0 0.151125 0.992543 0.819138 6.55278e+07 0.00285274 1.4742e+07 1.03963e+07 1.48628e+07 147 1.49236e+07 1.31681e+07 0.00249841 1.48023e+07 49.7961 0.00414348 0.994456 0 50.204 GTEX-QDVJ-0826-SM-48U1S 1 C1 6 pieces up to 8.7x4mm 8.1 Esophagus Esophagus - Muscularis 0004648 489 431 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990991 225603 0.977674 0.99301 0.835642 22138 1 76 0.00197689 207 0 8.18556e+07 0.0220522 422774 8.24318e+07 4.02149e+06 22163 4.0773e+07 0 0.142031 0.99301 0.829801 8.18556e+07 0.00258969 1.7824e+07 6.93186e+06 1.79822e+07 242 1.80171e+07 1.50527e+07 0.00228267 1.79444e+07 49.899 0.00512877 0.995029 0 50.2209 GTEX-QDVJ-0926-SM-2I5FU 1 C1 2 pieces, 8x8 & 9x9mm; no inflammation 8.7 Lung Lung 0008952 491 430 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.861901 170957 0.975794 0.866363 0.833835 24361 1 76 0.0032377 165 0 8.61407e+07 0.0236895 476522 9.94279e+07 2.03113e+07 24382 4.26899e+07 0 0.141959 0.866363 0.722403 8.61407e+07 0.0107209 1.89794e+07 1.0983e+07 1.93548e+07 166 1.95055e+07 1.66373e+07 0.00696001 1.9236e+07 49.6521 0.00479264 0.870825 0 50.4896 GTEX-QDVJ-0926-SM-2M48Y 1 C1 2 pieces, 8x8 & 9x9mm; no inflammation 8.7 Lung Lung 0008952 491 430 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-1126-SM-48U1U 1 C1 2 pieces ~14x4 mm, cortex & medulla; 10% fat 7.6 Adrenal Gland Adrenal Gland 0002369 497 425 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99176 260232 0.976057 0.993774 0.840985 22707 1 76 0.00215636 201 0 7.89218e+07 0.0236271 1.34493e+06 7.94163e+07 3.77753e+06 22726 3.93131e+07 0 0.135072 0.993774 0.835749 7.89218e+07 0.00281498 1.74968e+07 9.70268e+06 1.76436e+07 238 1.76716e+07 1.25479e+07 0.002485 1.76117e+07 49.9151 0.0169352 0.995788 0 50.2089 GTEX-QDVJ-1226-SM-48U1V 1 C1 2 pieces up to 9x8 mm; minimal fat; 6.8 Pancreas Pancreas 0001150 499 424 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991622 190212 0.976911 0.993526 0.843601 22198 1 76 0.00207896 128 0 7.2845e+07 0.0229305 202857 7.33196e+07 3.5079e+06 22215 3.62908e+07 0 0.13331 0.993526 0.838139 7.2845e+07 0.00279036 1.64489e+07 1.23132e+07 1.65907e+07 139 1.6659e+07 1.823e+07 0.00243398 1.65212e+07 49.7924 0.00276675 0.995429 0 50.2145 GTEX-QDVJ-1326-SM-48U1X 1 C1 6 pieces up to 7x3.5mm; 4 have mucosa at this level of sectioning 7.3 Colon Colon - Transverse 0001157 504 420 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989858 238042 0.975559 0.992078 0.837393 22834 1 76 0.0022601 160 0 6.83204e+07 0.0235945 823778 6.88659e+07 3.27118e+06 22855 3.39928e+07 0 0.138165 0.992078 0.830759 6.83204e+07 0.00300869 1.50276e+07 7.07014e+06 1.51615e+07 169 1.51932e+07 1.13164e+07 0.00263356 1.5135e+07 49.904 0.0119621 0.994299 0 50.2217 GTEX-QDVJ-1426-SM-48U1Y 1 C1 5 pieces up to 6.6x2 mm; 3 have good mucosal volume (1mm), 2 have very little mucosa 7.2 Stomach Stomach 0000945 506 419 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990459 164325 0.979281 0.992459 0.84517 22037 1 76 0.0021862 217 0 6.35743e+07 0.0203493 541487 6.40574e+07 3.11045e+06 22052 3.16576e+07 0 0.134112 0.992459 0.838796 6.35743e+07 0.00287599 1.44701e+07 3.51396e+07 1.46106e+07 168 1.46575e+07 1.41459e+07 0.0025304 1.45444e+07 49.8063 0.00845316 0.994459 0 50.2414 GTEX-QDVJ-1726-SM-2I5FX 1 C1 6 pieces up to 7x3 mm 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 535 393 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 RNASEQ 0.68969 129542 0.970711 0.695661 0.781879 25122 1 76 0.00385534 184 0 9.22142e+07 0.0289262 955604 1.32556e+08 4.05954e+07 25162 4.54951e+07 0 0.188833 0.695661 0.543922 9.22142e+07 0.0132918 1.98803e+07 1.27691e+07 2.01608e+07 177 2.03847e+07 1.30371e+07 0.00853305 2.03754e+07 49.9887 0.00720904 0.701632 0 50.3502 GTEX-QDVJ-1726-SM-2M492 1 C1 6 pieces up to 7x3 mm 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 535 393 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-1826-SM-2QU2U 1 C1 2 pieces 10x6 & 7x6 mm; well fixed; no hollow core 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 538 391 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-1826-SM-2S1P3 1 C1 2 pieces 10x6 & 7x6 mm; well fixed; no hollow core 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 538 391 BP-20259 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.444456 39042 0.974204 0.450888 0.790891 19670 1 76 0.00281944 104 0 2.75249e+07 0.0253801 129729 6.1046e+07 6.83563e+06 19680 1.3489e+07 0 0.183314 0.450888 0.356603 2.75249e+07 0.017942 5.9513e+06 3.20899e+06 6.10645e+06 110 6.3e+06 4.5112e+06 0.0102729 6.11699e+06 49.2631 0.0021251 0.457319 0 50.6434 GTEX-QDVJ-1926-SM-2QU3T 1 C1 2 pieces; 9x6 & 8x7mm; severe tissue fracture in one piece (histology origin) 7.8 Muscle Muscle - Skeletal 0011907 540 390 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-1926-SM-2S1PJ 1 C1 2 pieces; 9x6 & 8x7mm; severe tissue fracture in one piece (histology origin) 7.8 Muscle Muscle - Skeletal 0011907 540 390 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.700473 141271 0.974729 0.7054 0.851541 20371 1 76 0.00264336 118 0 6.9389e+07 0.0249994 926147 9.83682e+07 8.10029e+06 20379 3.43137e+07 0 0.123188 0.7054 0.600677 6.9389e+07 0.0171782 1.48305e+07 9.66088e+06 1.5309e+07 131 1.54715e+07 1.15727e+07 0.00985999 1.50714e+07 49.3452 0.0094151 0.710327 0 50.7937 GTEX-QDVJ-2026-SM-2QU3H 1 C1 2 pieces, 5x3 mm; 5% external fat 6.1 Nerve Nerve - Tibial 0001323 541 390 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-2026-SM-2S1PD 1 C1 2 pieces, 5x3 mm; 5% external fat 6.1 Nerve Nerve - Tibial 0001323 541 390 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.342724 29112 0.96858 0.347277 0.741437 19361 1 76 0.00275209 106 0 2.0708e+07 0.0306961 118683 5.96296e+07 6.17979e+06 19368 1.01124e+07 0 0.227143 0.347277 0.257484 2.0708e+07 0.0183074 4.42757e+06 2.67976e+06 4.58696e+06 109 4.70793e+06 3.05309e+06 0.0104278 4.55902e+06 49.1966 0.00199034 0.35183 0 50.8841 GTEX-QDVJ-2126-SM-2QU44 2 C1 2 pieces, 2.4 mm; mild intimal thickening; no external fat 7.1 Blood Vessel Artery - Tibial 0007610 543 388 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVJ-2126-SM-2S1PO 2 C1 2 pieces, 2.4 mm; mild intimal thickening; no external fat 7.1 Blood Vessel Artery - Tibial 0007610 543 388 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 TruSeq.v1 EXCLUDE 0.099428 5753 0.969691 0.0947406 0.805949 15211 1 76 0.00275503 106 0 7.01476e+06 0.0296496 26021 7.40418e+07 8.08686e+06 15212 3.24605e+06 0 0.163742 0.0947406 0.076356 7.01476e+06 0.022869 1.56438e+06 1.00023e+06 1.65814e+06 111 1.47896e+06 1.30006e+06 0.0133096 1.41428e+06 48.8822 0.000351437 0.0900531 0 51.4547 GTEX-QDVJ-2126-SM-5S2U2 2 C1 2 pieces, 2.4 mm; mild intimal thickening; no external fat 7.1 Blood Vessel Artery - Tibial 0007610 543 388 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.992146 338324 0.973737 0.994145 0.839999 21889 1 76 0.00193896 212 0 8.93227e+07 0.0259033 260904 8.98488e+07 8.18066e+06 21903 4.44661e+07 0 0.133737 0.994145 0.835081 8.93227e+07 0.00307745 1.93803e+07 1.11155e+07 1.95663e+07 238 1.95318e+07 1.80277e+07 0.00250706 1.9592e+07 50.0769 0.00290381 0.996144 0 50.2388 GTEX-QDVJ-2126-SM-DHXIQ 2 C1 2 pieces, 2.4 mm; mild intimal thickening; no external fat 7.1 Blood Vessel Artery - Tibial 0007610 543 388 BP-20260 RNA isolation_PAXgene Tissue miRNA 11/21/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.994897 483781 0.975527 0.995683 0.845107 21901 1 76 0.00218223 213 0 9.26772e+07 0.0241129 259599 9.3079e+07 4.87423e+06 21925 4.6189e+07 0 0.13042 0.995683 0.841458 9.26772e+07 0.00259521 2.01258e+07 9.90295e+06 2.0368e+07 253 2.0325e+07 1.95084e+07 0.00238855 2.02437e+07 49.8998 0.00278902 0.996468 0 50.299 GTEX-QDVN-0003-SM-2IJGQ B1 Blood Whole Blood 0013756 -279 BP-20185 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/17/2011 GTExBatch3_SNP5M_Dec11 12/22/2011 Illumina OMNI SNP Array OMNI 6762410089_R04C01 GTEX-QDVN-0003-SM-2XK1Z B1 Blood Whole Blood 0013756 -279 BP-20185 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/17/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R02C02 GTEX-QDVN-0003-SM-3UZFJ B1 Blood Whole Blood 0013756 -279 BP-20185 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/17/2011 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-QDVN-0003-SM-5URBU B1 Blood Whole Blood 0013756 -279 BP-20185 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/17/2011 LCSET-5270 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QDVN-0006-SM-48U1R B1 7.1 Blood Whole Blood 0013756 -279 BP-20176 RNA isolation_PAXgene Blood RNA (Manual) 11/17/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.983091 470485 0.973018 0.985495 0.837927 15799 1 76 0.00181674 103 0 6.62604e+07 0.026428 87060 6.72357e+07 3.6609e+06 15804 3.29683e+07 0 0.135091 0.985495 0.825773 6.62604e+07 0.00299325 1.50731e+07 6.64932e+07 1.51771e+07 125 1.52237e+07 1.63412e+07 0.00240356 1.51969e+07 49.9559 0.00129485 0.987899 0 50.1719 GTEX-QDVN-0008-SM-48U2D B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 260 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.99341 295546 0.973225 0.994796 0.833949 20787 1 76 0.00178114 144 0 6.78607e+07 0.0264473 196886 6.82157e+07 3.28877e+06 20808 3.38196e+07 0 0.139276 0.994796 0.829609 6.78607e+07 0.00238742 1.51131e+07 7.1217e+06 1.52034e+07 160 1.52602e+07 1.39659e+07 0.00208386 1.51434e+07 49.808 0.00288623 0.996181 0 50.149 GTEX-QDVN-0126-SM-4GIC9 1 B1 2 aliquots, 3x2mm & 5x1mm, each with ~1mm rim of surrounding fat; minimal occlusive atherosclerosis 8 Blood Vessel Artery - Coronary 0001621 111 920 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.988109 409756 0.974732 0.99136 0.826468 22448 1 76 0.00219952 192 0 8.58347e+07 0.0249825 192674 8.65828e+07 8.85483e+06 22473 4.26702e+07 0 0.148263 0.99136 0.819327 8.58347e+07 0.00366141 1.86752e+07 7.22600e+06 1.87885e+07 206 1.88095e+07 1.61402e+07 0.00292807 1.89266e+07 50.1552 0.00222531 0.99461 0 50.1512 GTEX-QDVN-0226-SM-48TZ9 1 B1 6 ~10x1.2mm pieces 8.5 Blood Vessel Artery - Aorta 0001496 120 911 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993168 202976 0.975297 0.994675 0.841457 20882 1 76 0.0017857 134 0 6.72714e+07 0.0243756 98806 6.76316e+07 3.15261e+06 20895 3.35239e+07 0 0.133841 0.994675 0.836976 6.72714e+07 0.00250692 1.46147e+07 5.55886e+06 1.47496e+07 157 1.4762e+07 1.36981e+07 0.00214576 1.47025e+07 49.899 0.00146094 0.996181 0 50.2296 GTEX-QDVN-0326-SM-2I3FS 1 B1 2 ~11x10mm aliquots. Mild interstitial fibrosis, subacute ischemic changes (boxcar nuclei; contraction bands) 8.7 Heart Heart - Left Ventricle 0006566 125 906 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1167_4 02/17/2012 TruSeq.v1 RNASEQ 0.913983 89250 0.982744 0.916427 0.869251 20552 1 76 0.00222668 268 0 8.03738e+07 0.0170033 1.90739e+06 8.77034e+07 1.00431e+07 20563 3.99666e+07 0 0.113492 0.916427 0.796605 8.03738e+07 0.00357522 1.73782e+07 1.08573e+07 1.8197e+07 259 1.81241e+07 1.37068e+07 0.00289915 1.75926e+07 49.2558 0.0217482 0.91887 0 51.1508 GTEX-QDVN-0326-SM-2IZIS 1 B1 2 ~11x10mm aliquots. Mild interstitial fibrosis, subacute ischemic changes (boxcar nuclei; contraction bands) 8.7 Heart Heart - Left Ventricle 0006566 125 906 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-0426-SM-48TZ6 1 B1 2 ~22x3mm aliquots, clean, well-preserved 9.2 Adrenal Gland Adrenal Gland 0002369 130 901 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992526 222634 0.979201 0.994291 0.840428 21384 1 76 0.00181146 154 0 6.61051e+07 0.0204808 696560 6.64847e+07 3.23003e+06 21400 3.29312e+07 0 0.138773 0.994291 0.83563 6.61051e+07 0.00248654 1.46486e+07 6.96523e+06 1.48027e+07 166 1.48046e+07 1.18449e+07 0.0021484 1.47514e+07 49.9101 0.010477 0.996057 0 50.2616 GTEX-QDVN-0526-SM-48TZ4 1 B1 2 ~12x9mm aliquots. Reasonably well-preserved 7.7 Spleen Spleen 0002106 135 896 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.988983 253154 0.963316 0.990731 0.775687 23716 1 76 0.00268873 134 0 6.73507e+07 0.0344567 202935 6.79808e+07 3.19117e+06 23742 3.34601e+07 0 0.187629 0.990731 0.768497 6.73507e+07 0.00346724 1.47957e+07 9.84331e+06 1.48764e+07 151 1.49209e+07 1.06775e+07 0.0030773 1.48688e+07 49.9127 0.00298518 0.992479 0 50.136 GTEX-QDVN-0626-SM-2I3FP 1 B1 2 ~12x10mm aliquots, one with incidental 0.5mm adenoma 6.9 Thyroid Thyroid 0002046 144 887 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 RNASEQ 0.89699 138994 0.963188 0.901071 0.751589 24521 1 76 0.00255255 161 0 8.04034e+07 0.0364825 274934 8.92309e+07 1.00099e+07 24561 3.98716e+07 0 0.211599 0.901071 0.677235 8.04034e+07 0.00409654 1.73793e+07 9.11454e+06 1.76412e+07 180 1.77664e+07 1.28392e+07 0.00332105 1.75846e+07 49.7429 0.00308115 0.905152 0 50.3738 GTEX-QDVN-0626-SM-2M49S 1 B1 2 ~12x10mm aliquots, one with incidental 0.5mm adenoma 6.9 Thyroid Thyroid 0002046 144 887 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-0726-SM-2I3FO 2 B1 2 ~13x7mm aliquots. Diffuse mild acute pneumonia/mild congestion 8.1 Lung Lung 0008952 148 883 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1167_3 02/17/2012 TruSeq.v1 EXCLUDE 0.745896 96860 0.971874 0.751312 0.772045 23270 1 76 0.00257575 110 0 6.0994e+07 0.0278611 222105 8.11834e+07 1.01873e+07 23295 3.01256e+07 0 0.199829 0.751312 0.580047 6.0994e+07 0.00449129 1.33651e+07 6.4429e+06 1.35423e+07 129 1.37211e+07 9.99278e+06 0.00352662 1.36005e+07 49.7793 0.00273584 0.756728 0 50.3293 GTEX-QDVN-0726-SM-2IZIP 2 B1 2 ~13x7mm aliquots. Diffuse mild acute pneumonia/mild congestion 8.1 Lung Lung 0008952 148 883 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-0726-SM-4B64L 2 B1 2 ~13x7mm aliquots. Diffuse mild acute pneumonia/mild congestion 8.1 Lung Lung 0008952 148 883 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989325 597682 0.97216 0.992166 0.771396 24612 1 76 0.00233401 203 0 8.91339e+07 0.0275863 243929 8.98377e+07 8.43286e+06 24645 4.43304e+07 0 0.200764 0.992166 0.765353 8.91339e+07 0.00309807 1.97147e+07 8.90428e+06 1.97834e+07 231 1.98572e+07 1.43784e+07 0.00271494 1.98816e+07 50.0308 0.00271522 0.995007 0 50.0869 GTEX-QDVN-0826-SM-48TZ2 1 B1 2 ~9.5x8mm aliquots. Macrovesicular steatohepatitis (~20% fat), bridging fibrosis focally approaching early cirrhosis; moderate chronic inflammation 8.8 Liver Liver 0001114 152 879 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.993685 188818 0.982381 0.995014 0.864872 20570 1 76 0.00179285 128 0 6.79712e+07 0.0169621 290470 6.83118e+07 3.04782e+06 20577 3.38696e+07 0 0.11751 0.995014 0.86056 6.79712e+07 0.00239581 1.49647e+07 9.61108e+06 1.50507e+07 159 1.50784e+07 1.49391e+07 0.00209393 1.50234e+07 49.9086 0.00425212 0.996344 0 50.1433 GTEX-QDVN-0926-SM-2I5GL 1 B1 2 ~7.5x6.5mm aliquots, ~30% interstitial fat, reduced numbers of Islets 7.1 Pancreas Pancreas 0001150 164 867 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 RNASEQ 0.683262 298943 0.965714 0.689576 0.794301 24643 1 76 0.0037735 130 0 9.3247e+07 0.0338725 437500 1.35224e+08 4.64135e+07 24674 4.59783e+07 0 0.171413 0.689576 0.547731 9.3247e+07 0.0140436 2.05858e+07 2.47724e+07 2.10032e+07 139 2.13023e+07 2.08272e+07 0.00886153 2.10978e+07 49.7589 0.00323538 0.69589 0 50.5018 GTEX-QDVN-1026-SM-48TZA 1 B1 4 5x3mm pieces; squamous mucosa is ~10% of thickness 9.4 Esophagus Esophagus - Mucosa 0006920 174 857 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.991684 654026 0.976423 0.992652 0.834135 24074 1 76 0.00218639 380 0 1.30201e+08 0.023247 583996 1.31164e+08 1.0065e+07 24106 6.48713e+07 0 0.142288 0.992652 0.828006 1.30201e+08 0.00268271 2.92508e+07 1.79814e+07 2.94843e+07 364 2.9515e+07 2.70623e+07 0.00243431 2.93502e+07 49.86 0.0044524 0.993621 0 50.1988 GTEX-QDVN-1126-SM-48TZ7 1 B1 6 ~5x4mm pieces 7.5 Esophagus Esophagus - Muscularis 0004648 178 853 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991834 247475 0.972521 0.993467 0.811917 22411 1 76 0.00183827 164 0 7.2181e+07 0.0272789 418053 7.26556e+07 3.43006e+06 22435 3.59543e+07 0 0.160604 0.993467 0.806613 7.2181e+07 0.00256609 1.57758e+07 6.83248e+06 1.59201e+07 185 1.58998e+07 1.17222e+07 0.00220158 1.59121e+07 50.0194 0.0057539 0.9951 0 50.2277 GTEX-QDVN-1226-SM-48TZ5 1 B1 6 ~9.5x3.5mm pieces. Well-preserved mucosa is 20-30% of thickness 7.9 Stomach Stomach 0000945 184 847 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989775 196966 0.975732 0.991727 0.820996 22381 1 76 0.00202982 169 0 6.28793e+07 0.0236902 528870 6.34038e+07 2.97815e+06 22400 3.13012e+07 0 0.154735 0.991727 0.814204 6.28793e+07 0.00285006 1.41683e+07 1.95741e+07 1.43156e+07 152 1.43523e+07 1.27157e+07 0.00243913 1.42484e+07 49.8183 0.00834129 0.993678 0 50.2586 GTEX-QDVN-1326-SM-48TZ3 2 B1 6 ~9x3.5mm pieces; mucosa is ~10-12% thickness, only seen in 4 of 6 pieces 8.3 Colon Colon - Transverse 0001157 194 837 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.989587 297636 0.970886 0.991359 0.827524 23549 1 76 0.00243933 170 0 7.64002e+07 0.0262797 321446 7.70662e+07 3.81039e+06 23572 3.79504e+07 0 0.143363 0.991359 0.820373 7.64002e+07 0.00315091 1.69166e+07 1.14783e+07 1.70669e+07 193 1.71132e+07 1.39334e+07 0.00279448 1.69986e+07 49.8321 0.00417104 0.99313 0 50.2212 GTEX-QDVN-1526-SM-2IZJP 1 B1 2 ~9x6mm aliquots, patchy glandular hyperplasia 5.2 Prostate Prostate 0002367 216 815 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-1626-SM-48TZC 2 B1 6 ~8.5x3.5mm pieces. Diffuse interstitial fibrosis with chronic interstitial nephritis 7.3 Kidney Kidney - Cortex 0001225 227 804 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.992478 195456 0.978751 0.994253 0.85117 22564 1 76 0.00179834 267 0 8.16943e+07 0.0210849 1.55138e+06 8.21665e+07 3.90451e+06 22578 4.07087e+07 0 0.127581 0.994253 0.846278 8.16943e+07 0.00255749 1.80645e+07 1.12272e+07 1.82306e+07 296 1.81087e+07 1.08643e+07 0.00217724 1.83087e+07 50.2746 0.018881 0.996029 0 50.2289 GTEX-QDVN-1926-SM-48TZ8 1 B1 2 ~11x5mm aliquots. Spermatogenesis appears reduced/arrested 7 Testis Testis 0000473 237 794 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-3084 04/18/2013 TruSeq.v1 EXCLUDE 0.990068 325606 0.956004 0.992001 0.755064 27934 1 76 0.00204452 156 0 7.69738e+07 0.0437917 1.34173e+06 7.75945e+07 3.68216e+06 27969 3.83224e+07 0 0.20094 0.992001 0.749024 7.69738e+07 0.00284916 1.68257e+07 8.39946e+06 1.6829e+07 188 1.68608e+07 1.05909e+07 0.00244606 1.69321e+07 50.1055 0.0172916 0.993934 0 50.005 GTEX-QDVN-2026-SM-2QU4I 1 B1 6 ~6.5x2.5mm pieces; squamous epithelium is ~1--2% of thickness 6 Skin Skin - Sun Exposed (Lower leg) 0004264 260 771 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-2026-SM-3GAEP 1 B1 6 ~6.5x2.5mm pieces; squamous epithelium is ~1--2% of thickness 6 Skin Skin - Sun Exposed (Lower leg) 0004264 260 771 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.96224 190621 0.973815 0.963758 0.825402 23806 1 76 0.0020324 357 0 1.24201e+08 0.0259144 636137 1.28871e+08 8.4274e+06 23839 6.17583e+07 0 0.148413 0.963758 0.795488 1.24201e+08 0.00737468 2.72262e+07 1.22192e+07 2.74088e+07 346 2.72481e+07 2.08441e+07 0.00469933 2.75969e+07 50.318 0.00493622 0.965277 0 50.1671 GTEX-QDVN-2126-SM-2I3FR 1 B1 2 ~9x6mm aliquots, one with ~40% fibrous (?scar) tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 263 768 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1167_4 04/02/2012 TruSeq.v1 EXCLUDE 0.389512 66813 0.972156 0.406223 0.798466 23766 1 76 0.00357262 114 0 6.6655e+07 0.0275429 492765 1.64084e+08 4.50536e+07 23777 3.1776e+07 0 0.17369 0.406223 0.324356 6.6655e+07 0.0670799 1.38692e+07 9.14644e+06 1.42889e+07 110 1.54716e+07 1.07324e+07 0.0340199 1.51515e+07 49.4775 0.00300312 0.422935 0 50.7451 GTEX-QDVN-2126-SM-2IZIR 1 B1 2 ~9x6mm aliquots, one with ~40% fibrous (?scar) tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 263 768 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-2126-SM-33HBS 1 B1 2 ~9x6mm aliquots, one with ~40% fibrous (?scar) tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 263 768 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.5827 270930 0.972852 0.583796 0.789702 24331 1 76 0.00225662 238 0 1.04053e+08 0.0266665 640847 1.78236e+08 1.95577e+07 24373 5.15349e+07 0 0.183149 0.583796 0.461025 1.04053e+08 0.00665011 2.27363e+07 1.04017e+07 2.31011e+07 261 2.31021e+07 1.61794e+07 0.00444924 2.29445e+07 49.8288 0.0035955 0.584892 0 50.3979 GTEX-QDVN-2126-SM-5SI7X 1 B1 2 ~9x6mm aliquots, one with ~40% fibrous (?scar) tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 263 768 BP-20293 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.987284 315003 0.974187 0.991271 0.805231 24050 1 76 0.00197063 201 0 8.27059e+07 0.0256059 484006 8.34342e+07 7.99451e+06 24073 4.10892e+07 0 0.168956 0.991271 0.798203 8.27059e+07 0.00324362 1.81425e+07 9.00846e+06 1.82652e+07 208 1.83074e+07 1.41322e+07 0.00260457 1.84235e+07 50.158 0.00580105 0.995259 0 50.1685 GTEX-QDVN-2226-SM-2QU3V 1 B1 2 ~7.5x4mm aliquots, nerve bundles widely dispersed; ~ 70% both aliquots is interstitial fat 6.5 Nerve Nerve - Tibial 0001323 271 760 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-2226-SM-2S1PM 1 B1 2 ~7.5x4mm aliquots, nerve bundles widely dispersed; ~ 70% both aliquots is interstitial fat 6.5 Nerve Nerve - Tibial 0001323 271 760 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.942715 119885 0.971745 0.948145 0.782895 24331 1 76 0.00262974 140 0 9.10647e+07 0.0280322 224129 9.60451e+07 6.98228e+06 24367 4.51008e+07 0 0.18885 0.948145 0.742298 9.10647e+07 0.0162824 1.98546e+07 9.33534e+06 2.00844e+07 162 2.03329e+07 1.52517e+07 0.00941697 2.0068e+07 49.6721 0.00233358 0.953574 0 50.2877 GTEX-QDVN-2326-SM-2QU3O 1 B1 2 7x6mm aliquots; prominent peripheral atherosclerosis 6.1 Blood Vessel Artery - Tibial 0007610 277 754 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-2326-SM-2S1PF 1 B1 2 7x6mm aliquots; prominent peripheral atherosclerosis 6.1 Blood Vessel Artery - Tibial 0007610 277 754 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.479075 31222 0.971922 0.484638 0.789828 19712 1 76 0.00267829 106 0 3.4749e+07 0.0276214 127262 7.17008e+07 6.90627e+06 19722 1.70744e+07 0 0.182094 0.484638 0.382781 3.4749e+07 0.0174318 7.37666e+06 3.28911e+06 7.57037e+06 113 7.74651e+06 6.14377e+06 0.00997034 7.55802e+06 49.3842 0.0017749 0.490202 0 50.648 GTEX-QDVN-2426-SM-2QU5A 1 B1 2 ~9x6mm aliquots, ~40% interstitial adipose tissue 7.7 Muscle Muscle - Skeletal 0011907 281 750 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QDVN-2426-SM-2S1Q4 1 B1 2 ~9x6mm aliquots, ~40% interstitial adipose tissue 7.7 Muscle Muscle - Skeletal 0011907 281 750 BP-20294 RNA isolation_PAXgene Tissue miRNA 11/22/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.777849 133932 0.972769 0.782784 0.824719 20870 1 76 0.00240269 131 0 7.65745e+07 0.0268456 554968 9.78232e+07 8.92395e+06 20886 3.79116e+07 0 0.14805 0.782784 0.645577 7.65745e+07 0.0165178 1.642e+07 1.19047e+07 1.68708e+07 141 1.70564e+07 1.41547e+07 0.00941573 1.66556e+07 49.4055 0.00567317 0.78772 0 50.6771 GTEX-QEG4-0003-SM-2MRI5 C1 Blood Whole Blood 0013756 785 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321087_R03C01 GTEX-QEG4-0003-SM-2XK24 C1 Blood Whole Blood 0013756 785 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R05C01 GTEX-QEG4-0003-SM-3USS4 C1 Blood Whole Blood 0013756 785 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QEG4-0003-SM-5URCG C1 Blood Whole Blood 0013756 785 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 LCSET-5270 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QEG4-0006-SM-2I5FY C1 8 Blood Whole Blood 0013756 785 BP-20244 RNA isolation_PAXgene Blood RNA (Manual) 11/21/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.945393 657653 0.964132 0.953518 0.762152 20999 1 76 0.00332444 118 0 9.99247e+07 0.0347279 315367 1.04796e+08 2.22113e+07 21019 4.93479e+07 0 0.20198 0.953518 0.726726 9.99247e+07 0.0111499 2.23648e+07 1.20619e+08 2.29449e+07 146 2.327e+07 2.22815e+07 0.00720383 2.28729e+07 49.5698 0.00300935 0.961643 0 50.6401 GTEX-QEG4-0006-SM-2M493 C1 8 Blood Whole Blood 0013756 785 BP-20244 RNA isolation_PAXgene Blood RNA (Manual) 11/21/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-0008-SM-48TYZ C1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 893 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.991484 293582 0.974134 0.993104 0.841095 20362 1 76 0.00189498 184 0 6.92014e+07 0.0255083 169221 6.96819e+07 3.33679e+06 20375 3.44752e+07 0 0.13304 0.993104 0.835295 6.92014e+07 0.00251963 1.53818e+07 7.72434e+06 1.54329e+07 172 1.55167e+07 1.38358e+07 0.0022068 1.53983e+07 49.8086 0.00242848 0.994723 0 50.0829 GTEX-QEG4-0126-SM-48TZE 2 C1 2 ~7.5x5.5mm aliquots. Mature spermatozoa are evident 6.4 Testis Testis 0000473 826 1165 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.990127 599752 0.893188 0.991644 0.684205 31337 1 76 0.0021303 125 0 5.88096e+07 0.106465 420167 5.93052e+07 2.80628e+06 31380 2.92986e+07 0 0.208982 0.991644 0.678488 5.88096e+07 0.00284063 1.15524e+07 2.64723e+07 1.17795e+07 112 1.18283e+07 9.14839e+06 0.00248492 1.15951e+07 49.5021 0.00708483 0.993161 0 50.4867 GTEX-QEG4-0226-SM-2QU52 1 C1 6 ~7.5x2.5mm pieces. Squamous epithelium is ~1-2% of thickness; several pieces have adherent aggregates of subcutaneous fat up to ~9x2mm. 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 893 1099 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-0226-SM-2S1PY 1 C1 6 ~7.5x2.5mm pieces. Squamous epithelium is ~1-2% of thickness; several pieces have adherent aggregates of subcutaneous fat up to ~9x2mm. 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 893 1099 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.662235 86035 0.970048 0.666495 0.788443 23001 1 76 0.00284765 129 0 5.50187e+07 0.0296782 529044 8.25493e+07 8.54101e+06 23023 2.71952e+07 0 0.181605 0.666495 0.525494 5.50187e+07 0.0171968 1.18874e+07 7.09464e+06 1.21409e+07 116 1.22776e+07 8.36575e+06 0.00997638 1.20564e+07 49.5455 0.00640883 0.670755 0 50.5275 GTEX-QEG4-0326-SM-2S1OS 1 C1 2 ~8.5x8mm aliquots 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 896 1097 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 TruSeq.v1 EXCLUDE 0.131424 15780 0.957248 0.125507 0.749381 16761 1 76 0.00281802 103 0 8.55298e+06 0.0391548 54179 6.81477e+07 7.65301e+06 16762 4.00201e+06 0 0.207867 0.125507 0.0940523 8.55298e+06 0.023025 1.86472e+06 1.77032e+06 2.02806e+06 112 1.84565e+06 1.16389e+06 0.0133979 1.67804e+06 47.6217 0.000795023 0.119589 0 52.098 GTEX-QEG4-0326-SM-5S2UQ 1 C1 2 ~8.5x8mm aliquots 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 896 1097 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.992406 242351 0.971986 0.99412 0.808731 23144 1 76 0.00217598 204 0 8.0621e+07 0.0277141 474548 8.10979e+07 7.81071e+06 23169 4.01485e+07 0 0.163255 0.99412 0.803976 8.0621e+07 0.00330494 1.75973e+07 8.98229e+06 1.77083e+07 210 1.76718e+07 1.25522e+07 0.00273948 1.77663e+07 50.1333 0.00585155 0.995835 0 50.1572 GTEX-QEG4-0326-SM-DIPE3 1 C1 2 ~8.5x8mm aliquots 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 896 1097 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-10311 01/17/2017 TruSeq.v1 RNASEQ 0.992686 618372 0.972483 0.994019 0.814793 24381 1 76 0.00234742 378 0 1.15559e+08 0.0272146 674715 1.16254e+08 8.13209e+06 24417 5.7575e+07 0 0.157691 0.994019 0.809919 1.15559e+08 0.0034018 2.51706e+07 1.25023e+07 2.54064e+07 350 2.54014e+07 1.87996e+07 0.0028739 2.53202e+07 49.92 0.00580379 0.995352 0 50.2331 GTEX-QEG4-0426-SM-2I5GK 1 C1 2 ~8x6.5mm aliquots. Mild ischemic changes. Minute (0.7x0.3mm) fibrous scar) 7.2 Heart Heart - Left Ventricle 0006566 899 1094 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.38007 116880 0.976764 0.391827 0.84157 20966 1 76 0.00404081 80 0 6.13452e+07 0.0228639 3.01462e+06 1.56562e+08 5.29749e+07 20975 2.92605e+07 0 0.135193 0.391827 0.32975 6.13452e+07 0.0662838 1.29144e+07 1.26284e+07 1.34373e+07 97 1.41946e+07 8.59991e+06 0.0342285 1.37192e+07 49.1486 0.0192551 0.403584 0 50.992 GTEX-QEG4-0426-SM-2M49M 1 C1 2 ~8x6.5mm aliquots. Mild ischemic changes. Minute (0.7x0.3mm) fibrous scar) 7.2 Heart Heart - Left Ventricle 0006566 899 1094 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-0426-SM-33HC3 1 C1 2 ~8x6.5mm aliquots. Mild ischemic changes. Minute (0.7x0.3mm) fibrous scar) 7.2 Heart Heart - Left Ventricle 0006566 899 1094 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.966685 992437 0.978409 0.970069 0.83174 23667 1 76 0.00255323 516 0 1.53452e+08 0.0213461 5.90076e+06 1.58187e+08 1.2436e+07 23712 7.61265e+07 0 0.146669 0.970069 0.806846 1.53452e+08 0.00666218 3.38187e+07 1.6417e+07 3.42483e+07 517 3.43877e+07 2.21377e+07 0.00460054 3.4158e+07 49.8324 0.0373025 0.973453 0 50.3155 GTEX-QEG4-0426-SM-5S2VQ 1 C1 2 ~8x6.5mm aliquots. Mild ischemic changes. Minute (0.7x0.3mm) fibrous scar) 7.2 Heart Heart - Left Ventricle 0006566 899 1094 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.990877 315017 0.980395 0.993656 0.845387 21571 1 76 0.00226454 267 0 8.96488e+07 0.0194089 3.42562e+06 9.02212e+07 8.82761e+06 21586 4.4613e+07 0 0.135009 0.993656 0.840023 8.96488e+07 0.0033807 1.98813e+07 1.5552e+07 1.97451e+07 282 1.98881e+07 1.44011e+07 0.00282106 1.99564e+07 50.0857 0.0379691 0.996434 0 49.8281 GTEX-QEG4-0526-SM-48TZD 2 C1 2 ~7x6.5mm aliquots. Diffuse severe congestion/?hemorrhagic pneumonitis 6.7 Lung Lung 0008952 904 1090 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3084 04/18/2013 TruSeq.v1 RNASEQ 0.986718 226122 0.969956 0.988227 0.728302 23945 1 76 0.00242325 135 0 7.19719e+07 0.0296826 276160 7.28294e+07 3.38928e+06 23980 3.58246e+07 0 0.241654 0.988227 0.719727 7.19719e+07 0.00314538 1.58921e+07 9.28928e+06 1.59435e+07 156 1.59814e+07 1.03293e+07 0.00278376 1.59573e+07 49.9623 0.00379188 0.989735 0 50.0808 GTEX-QEG4-0626-SM-2M487 1 C1 2 ~10x6mm aliquots; ~5% interstitial adipose tissue in one 8.5 Muscle Muscle - Skeletal 0011907 907 1088 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-0626-SM-2S1OY 1 C1 2 ~10x6mm aliquots; ~5% interstitial adipose tissue in one 8.5 Muscle Muscle - Skeletal 0011907 907 1088 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.849606 175670 0.972995 0.855521 0.857753 18989 1 76 0.00246659 95 0 6.26513e+07 0.0267265 676440 7.32317e+07 5.52679e+06 19001 3.09958e+07 0 0.115242 0.855521 0.733826 6.26513e+07 0.0162269 1.30853e+07 1.00487e+07 1.34313e+07 109 1.36372e+07 1.27091e+07 0.00929919 1.32459e+07 49.2722 0.00923698 0.861436 0 50.6524 GTEX-QEG4-0726-SM-4R1JL 1 C1 6 ~6x1.2mm pieces; squamous mucosa is ~25-40% of thickness 7.4 Esophagus Esophagus - Mucosa 0006920 909 1087 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991028 295919 0.970534 0.992875 0.792351 21652 1 76 0.00206144 122 0 5.34876e+07 0.0292495 379272 5.38715e+07 3.08457e+06 21667 2.66081e+07 0 0.178183 0.992875 0.786705 5.34876e+07 0.00289736 1.19187e+07 6.58328e+06 1.19777e+07 138 1.19656e+07 7.93283e+06 0.00247863 1.20343e+07 50.1432 0.00704031 0.994721 0 50.1235 GTEX-QEG4-0726-SM-CNNRF 1 C1 6 ~6x1.2mm pieces; squamous mucosa is ~25-40% of thickness 7.4 Esophagus Esophagus - Mucosa 0006920 909 1087 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.992668 370993 0.969166 0.994098 0.791878 24385 1 76 0.00232589 275 0 1.13489e+08 0.0306021 1.06982e+06 1.14163e+08 1.12657e+07 24416 5.65705e+07 0 0.177288 0.994098 0.787205 1.13489e+08 0.00295367 2.51627e+07 1.74863e+07 2.54027e+07 272 2.54261e+07 1.75524e+07 0.00263933 2.52898e+07 49.8657 0.00937097 0.995528 0 50.2374 GTEX-QEG4-0826-SM-EAZAY 2 C1 6 ~7x2mm pieces 5.5 Esophagus Esophagus - Muscularis 0004648 910 1086 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.986168 331468 0.965746 0.987154 0.788967 22959 1 76 0.00228474 159 0 7.92328e+07 0.0340788 1.21952e+06 8.02639e+07 5.9602e+06 22983 3.94645e+07 0 0.176779 0.987154 0.778832 7.92328e+07 0.00354588 1.69614e+07 9.51261e+06 1.71571e+07 201 1.70511e+07 1.06098e+07 0.00291468 1.7145e+07 50.1373 0.0151939 0.98814 0 50.2869 GTEX-QEG4-0926-SM-4R1JO 1 C1 6 ~8.5x1.5mm pieces, several with adherent fat/fibrous tissue up to ~5.2mm 7.1 Blood Vessel Artery - Aorta 0001496 912 1085 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.988588 383424 0.968052 0.990858 0.745095 21704 1 76 0.00227138 124 0 5.69128e+07 0.0315923 89369 5.74378e+07 3.33089e+06 21728 2.82565e+07 0 0.222957 0.990858 0.738284 5.69128e+07 0.00308135 1.22046e+07 5.95732e+06 1.22765e+07 130 1.22883e+07 8.9329e+06 0.00267544 1.23272e+07 50.0791 0.00155593 0.993129 0 50.1468 GTEX-QEG4-1126-SM-2QU2V 1 C1 2 ~4.3x2.3mm aliquots; peripheral fat is ~10% of specimen (focally ~0.5mm) 6.5 Nerve Nerve - Tibial 0001323 928 1070 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-1126-SM-2S1P7 1 C1 2 ~4.3x2.3mm aliquots; peripheral fat is ~10% of specimen (focally ~0.5mm) 6.5 Nerve Nerve - Tibial 0001323 928 1070 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.832102 92474 0.962021 0.838134 0.741591 24391 1 76 0.00286238 118 0 6.9095e+07 0.0377338 319640 8.24391e+07 6.53164e+06 24438 3.41576e+07 0 0.22043 0.838134 0.621553 6.9095e+07 0.0170215 1.49676e+07 6.85903e+06 1.51201e+07 122 1.53472e+07 9.49241e+06 0.00989099 1.51812e+07 49.7281 0.00387729 0.844166 0 50.2535 GTEX-QEG4-1226-SM-2QU2X 1 C1 2 ~2.3x1.2mm aliquots, good clean specimens 8 Blood Vessel Artery - Tibial 0007610 929 1074 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG4-1226-SM-2S1P6 1 C1 2 ~2.3x1.2mm aliquots, good clean specimens 8 Blood Vessel Artery - Tibial 0007610 929 1074 BP-20319 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.703333 40789 0.97412 0.709145 0.835536 19700 1 76 0.00263386 108 0 4.29787e+07 0.0253291 175918 6.06063e+07 5.76482e+06 19709 2.12209e+07 0 0.138584 0.709145 0.592516 4.29787e+07 0.0167484 9.04219e+06 3.37918e+06 9.22184e+06 109 9.37464e+06 8.14891e+06 0.0096333 9.20309e+06 49.5383 0.00290263 0.714958 0 50.4918 GTEX-QEG4-1826-SM-447AK 2 C1 2 ~8x7mm aliquots. Focal macrovesicular steatosis involves !0% of parenchyma 7.4 Liver Liver 0001114 970 1037 BP-20320 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-2912 TruSeq.v1 EXCLUDE 0.98622 190197 0.960409 0.987998 0.753651 24485 1 76 0.00223826 114 0 5.61646e+07 0.0393567 534278 5.68468e+07 2.85685e+06 24511 2.79384e+07 0 0.206758 0.987998 0.744606 5.61646e+07 0.00291254 1.22374e+07 6.29627e+06 1.22888e+07 132 1.23111e+07 7.19273e+06 0.00257479 1.23117e+07 50.0011 0.00939856 0.989777 0 50.1048 GTEX-QEG4-1826-SM-4R1JN 2 C1 2 ~8x7mm aliquots. Focal macrovesicular steatosis involves !0% of parenchyma 7.4 Liver Liver 0001114 970 1037 BP-20320 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.992433 358326 0.966316 0.994056 0.82958 20048 1 76 0.00218876 124 0 5.84703e+07 0.0335744 1.30252e+06 5.88199e+07 3.29355e+06 20062 2.91094e+07 0 0.136736 0.994056 0.824649 5.84703e+07 0.00296379 1.28064e+07 1.0731e+07 1.28643e+07 150 1.28133e+07 8.67557e+06 0.00257564 1.29554e+07 50.2758 0.0221443 0.99568 0 50.1128 GTEX-QEG4-1826-SM-CKZN9 2 C1 2 ~8x7mm aliquots. Focal macrovesicular steatosis involves !0% of parenchyma 7.4 Liver Liver 0001114 970 1037 BP-20320 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.990847 453993 0.971205 0.993135 0.832713 21104 1 76 0.00228532 197 0 8.32543e+07 0.0286701 1.98947e+06 8.38299e+07 8.1116e+06 21124 4.14495e+07 0 0.138493 0.993135 0.826996 8.32543e+07 0.00365465 1.81522e+07 1.21912e+07 1.84997e+07 217 1.85051e+07 1.30398e+07 0.00296841 1.83119e+07 49.7376 0.0237322 0.995422 0 50.4741 GTEX-QEG4-2226-SM-4R1JM 2 C1 2 ~9.5x7.5mm aliquots, one with prominent glandular hyperplasia; the other with prominent stromal hyperplasia 6.1 Prostate Prostate 0002367 978 1033 BP-20320 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.99027 251963 0.960318 0.99189 0.75261 24454 1 76 0.00223561 123 0 5.74177e+07 0.0394688 632063 5.78872e+07 3.45746e+06 24482 2.85687e+07 0 0.207708 0.99189 0.746507 5.74177e+07 0.00302433 1.25003e+07 6.78089e+06 1.26042e+07 142 1.25702e+07 7.27983e+06 0.00262932 1.26301e+07 50.1188 0.0109189 0.993511 0 50.2069 GTEX-QEG4-2226-SM-CXZJD 2 C1 2 ~9.5x7.5mm aliquots, one with prominent glandular hyperplasia; the other with prominent stromal hyperplasia 6.1 Prostate Prostate 0002367 978 1033 BP-20320 RNA isolation_PAXgene Tissue miRNA 11/23/2011 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.992873 334082 0.959975 0.994122 0.751265 26304 1 76 0.00244388 267 0 9.51136e+07 0.0397949 1.07113e+06 9.5676e+07 6.65319e+06 26351 4.73918e+07 0 0.208709 0.994122 0.74685 9.51136e+07 0.00298626 2.05456e+07 1.14389e+07 2.10215e+07 257 2.09746e+07 1.22559e+07 0.00271473 2.0709e+07 49.6814 0.0111954 0.995371 0 50.5724 GTEX-QEG5-0003-SM-2MRI7 C1 Blood Whole Blood 0013756 496 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321087_R04C01 GTEX-QEG5-0003-SM-2XK26 C1 Blood Whole Blood 0013756 496 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R03C02 GTEX-QEG5-0003-SM-3USS5 C1 Blood Whole Blood 0013756 496 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QEG5-0003-SM-5URCP C1 Blood Whole Blood 0013756 496 BP-20248 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2011 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QEG5-0006-SM-2I5FZ C1 7.5 Blood Whole Blood 0013756 496 BP-20244 RNA isolation_PAXgene Blood RNA (Manual) 11/21/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.891718 576697 0.964463 0.896979 0.80644 20244 1 76 0.0034703 127 0 9.17411e+07 0.0347192 721238 1.02278e+08 2.22043e+07 20256 4.54279e+07 0 0.158023 0.896979 0.72336 9.17411e+07 0.0114072 2.01602e+07 6.68722e+07 2.06162e+07 156 2.07764e+07 1.92698e+07 0.00741549 2.05122e+07 49.68 0.00705175 0.90224 0 50.5591 GTEX-QEG5-0006-SM-2IZJE C1 7.5 Blood Whole Blood 0013756 496 BP-20244 RNA isolation_PAXgene Blood RNA (Manual) 11/21/2011 GTEx_Batch3Affy_Dec2011 01/13/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0008-SM-4R1KL C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 591 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.992753 405776 0.97585 0.994406 0.848523 19673 1 76 0.00168382 129 0 5.95726e+07 0.0237679 271208 5.99077e+07 3.48428e+06 19684 2.96675e+07 0 0.127327 0.994406 0.843777 5.95726e+07 0.00218631 1.33735e+07 8.43342e+06 1.33991e+07 127 1.34323e+07 1.47655e+07 0.00193465 1.34391e+07 50.0126 0.0045271 0.996058 0 50.0478 GTEX-QEG5-0008-SM-CE6QS C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 591 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.990963 756092 0.978356 0.991978 0.852526 21527 1 76 0.00777496 183 0 9.79671e+07 0.0212507 489787 9.87594e+07 1.60284e+07 21550 4.87709e+07 0 0.12583 0.991978 0.845687 9.79671e+07 0.00683488 2.20577e+07 1.29751e+07 2.20819e+07 175 2.22185e+07 2.43586e+07 0.0073054 2.20253e+07 49.7816 0.0049594 0.992992 0 50.0274 GTEX-QEG5-0126-SM-4R1JR 2 C1 2 pieces 8x5 & 7x6 mm;spermatogenesis 6 Testis Testis 0000473 517 880 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-3812,LCSET-4104 10/13/2013 TruSeq.v1 EXCLUDE 0.987857 576178 0.934779 0.990717 0.727427 31930 1 76 0.00215913 159 0 7.49492e+07 0.0648777 691307 7.56515e+07 6.06238e+06 31977 3.72343e+07 0 0.207353 0.990717 0.720674 7.49492e+07 0.00337923 1.56193e+07 1.29121e+07 1.57004e+07 153 1.57662e+07 1.273e+07 0.00276742 1.57568e+07 49.9851 0.00913804 0.993576 0 50.1294 GTEX-QEG5-0126-SM-CMKFD 2 C1 2 pieces 8x5 & 7x6 mm;spermatogenesis 6 Testis Testis 0000473 517 880 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.992622 824754 0.936293 0.993491 0.729355 33888 1 76 0.00225874 284 0 1.14797e+08 0.0633272 1.32577e+06 1.15549e+08 7.84195e+06 33965 5.72033e+07 0 0.206939 0.993491 0.724607 1.14797e+08 0.00261092 2.39227e+07 1.89002e+07 2.40862e+07 272 2.41558e+07 1.94776e+07 0.00243468 2.39421e+07 49.7779 0.0114737 0.994361 0 50.1703 GTEX-QEG5-0226-SM-2I5GI 1 C1 6 pieces up to 7x3 mm 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 590 808 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.66565 139516 0.972846 0.675401 0.796912 25463 1 76 0.0042108 150 0 9.5258e+07 0.0267195 897661 1.41039e+08 5.16715e+07 25497 4.67057e+07 0 0.175935 0.675401 0.538235 9.5258e+07 0.0267408 2.05009e+07 1.46761e+07 2.09434e+07 150 2.15137e+07 1.62632e+07 0.0153132 2.11984e+07 49.6309 0.00636462 0.685152 0 50.5338 GTEX-QEG5-0226-SM-2M49K 1 C1 6 pieces up to 7x3 mm 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 590 808 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0326-SM-2QU3C 1 C1 2 pieces 8x7 & 7.5x6.5 mm; good fixation 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 593 806 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0326-SM-2S1PB 1 C1 2 pieces 8x7 & 7.5x6.5 mm; good fixation 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 593 806 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.800337 69777 0.976256 0.806733 0.809543 20877 1 76 0.00276418 105 0 4.98688e+07 0.0234713 343639 6.18157e+07 8.35398e+06 20891 2.46392e+07 0 0.166713 0.806733 0.653085 4.98688e+07 0.016347 1.08803e+07 5.28194e+06 1.11002e+07 113 1.12927e+07 8.09542e+06 0.00950174 1.10341e+07 49.4209 0.00555909 0.81313 0 50.5002 GTEX-QEG5-0426-SM-2I5GJ 1 C1 2 pieces 7x6 & 9x7 mm; severe fracture artifacts appear histologic not fixation 7.8 Muscle Muscle - Skeletal 0011907 612 790 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.907847 208364 0.981195 0.912836 0.87403 19896 1 76 0.00299511 208 0 9.59522e+07 0.0185209 1.44931e+06 1.05114e+08 2.13757e+07 19904 4.7588e+07 0 0.107166 0.912836 0.797846 9.59522e+07 0.0105686 2.08156e+07 1.56833e+07 2.11444e+07 233 2.12905e+07 1.84974e+07 0.00676118 2.11067e+07 49.7833 0.013788 0.917825 0 50.3918 GTEX-QEG5-0426-SM-2M49L 1 C1 2 pieces 7x6 & 9x7 mm; severe fracture artifacts appear histologic not fixation 7.8 Muscle Muscle - Skeletal 0011907 612 790 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0526-SM-2QU38 1 C1 2 pieces , each ~6.5x3 mm 6.7 Nerve Nerve - Tibial 0001323 620 783 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0526-SM-2S1PC 1 C1 2 pieces , each ~6.5x3 mm 6.7 Nerve Nerve - Tibial 0001323 620 783 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1465 06/02/2012 TruSeq.v1 EXCLUDE 0.307353 17390 0.970047 0.317344 0.772045 17617 1 76 0.00302423 110 0 1.21471e+07 0.0296565 48908 3.82775e+07 5.42898e+06 17619 5.81749e+06 0 0.198003 0.317344 0.245004 1.21471e+07 0.0198945 2.56045e+06 1.52278e+06 2.62564e+06 111 2.79724e+06 2.00782e+06 0.0111938 2.73415e+06 49.4297 0.00127772 0.327335 0 50.6285 GTEX-QEG5-0526-SM-5S2V3 1 C1 2 pieces , each ~6.5x3 mm 6.7 Nerve Nerve - Tibial 0001323 620 783 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992165 278563 0.973466 0.994117 0.776683 23588 1 76 0.00207833 214 0 9.20868e+07 0.026257 341496 9.26317e+07 8.90543e+06 23626 4.58401e+07 0 0.196782 0.994117 0.772115 9.20868e+07 0.00301708 2.02991e+07 1.02454e+07 2.04468e+07 236 2.04028e+07 1.5602e+07 0.00254678 2.05238e+07 50.1478 0.0036866 0.996069 0 50.1812 GTEX-QEG5-0626-SM-2QU47 1 C1 2 pieces, each with 1 1mm artery and 1.5mm vein; 20% adipose tissue 7.9 Blood Vessel Artery - Tibial 0007610 622 781 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0626-SM-2S1PP 1 C1 2 pieces, each with 1 1mm artery and 1.5mm vein; 20% adipose tissue 7.9 Blood Vessel Artery - Tibial 0007610 622 781 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1465 06/02/2012 TruSeq.v1 RNASEQ 0.686542 52190 0.977092 0.6876 0.841661 20887 1 76 0.00245091 114 0 6.63739e+07 0.0225037 234620 9.65298e+07 6.73499e+06 20896 3.28093e+07 0 0.135431 0.6876 0.578726 6.63739e+07 0.015944 1.43765e+07 5.30272e+06 1.46383e+07 124 1.46531e+07 1.28528e+07 0.00918706 1.44319e+07 49.6197 0.00243054 0.688657 0 50.4512 GTEX-QEG5-0726-SM-4R1JQ 1 C1 2 pieces up to 10x6 mm; ducts; ~30% adipose 7.2 Breast Breast - Mammary Tissue 0008367 664 740 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990686 302537 0.968469 0.992306 0.718108 23799 1 76 0.0021654 134 0 6.58716e+07 0.0312576 299523 6.63823e+07 3.72322e+06 23834 3.27832e+07 0 0.250361 0.992306 0.712583 6.58716e+07 0.0028397 1.45328e+07 6.20258e+06 1.46052e+07 145 1.46105e+07 9.84342e+06 0.002502 1.46335e+07 50.0393 0.00451209 0.993926 0 50.1243 GTEX-QEG5-0726-SM-D4P1T 1 C1 2 pieces up to 10x6 mm; ducts; ~30% adipose 7.2 Breast Breast - Mammary Tissue 0008367 664 740 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.992476 345843 0.968392 0.993947 0.715806 25682 1 76 0.00277231 276 0 1.0892e+08 0.0313229 520520 1.09583e+08 1.41299e+07 25750 5.42559e+07 0 0.252586 0.993947 0.711473 1.0892e+08 0.00356871 2.39898e+07 1.06887e+07 2.41396e+07 280 2.41753e+07 1.64389e+07 0.00316992 2.41062e+07 49.9284 0.00475001 0.995417 0 50.1556 GTEX-QEG5-0826-SM-2I5GF 2 C1 2 pieces ~7x7 & 7x4mm; vascular congestion 7.7 Thyroid Thyroid 0002046 682 722 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.966219 372650 0.963671 0.972095 0.784114 25336 1 76 0.00312375 275 0 1.2125e+08 0.0360194 392239 1.24731e+08 2.3664e+07 25378 6.00763e+07 0 0.179557 0.972095 0.762233 1.2125e+08 0.0102817 2.62313e+07 2.18319e+07 2.64377e+07 299 2.6654e+07 2.07008e+07 0.00668111 2.66768e+07 50.0214 0.00314469 0.977972 0 50.1959 GTEX-QEG5-0826-SM-2M49H 2 C1 2 pieces ~7x7 & 7x4mm; vascular congestion 7.7 Thyroid Thyroid 0002046 682 722 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0926-SM-2M49I 1 C1 2 pieces ~7.8x6 mm; 7 Heart Heart - Left Ventricle 0006566 685 720 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-0926-SM-2TC64 1 C1 2 pieces ~7.8x6 mm; 7 Heart Heart - Left Ventricle 0006566 685 720 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.668144 390994 0.961483 0.672507 0.827212 21649 1 76 0.00321623 103 0 7.28702e+07 0.0382831 5.76391e+06 1.08356e+08 2.33258e+07 21661 3.60386e+07 0 0.134271 0.672507 0.556306 7.28702e+07 0.017669 1.5865e+07 1.90029e+07 1.6229e+07 136 1.63856e+07 1.11299e+07 0.0103957 1.61345e+07 49.6139 0.0531942 0.676871 0 50.567 GTEX-QEG5-1026-SM-4R1KT 1 C1 2 pieces each with 2 mm artery; small plaque 7.8 Blood Vessel Artery - Coronary 0001621 687 719 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990787 346474 0.97636 0.99313 0.829201 21813 1 76 0.00195892 144 0 6.83384e+07 0.0232782 139500 6.88112e+07 3.94562e+06 21827 3.39911e+07 0 0.147159 0.99313 0.823505 6.83384e+07 0.00269607 1.48846e+07 6.10313e+06 1.50042e+07 154 1.50159e+07 1.41003e+07 0.00232662 1.50338e+07 50.0299 0.00202729 0.995473 0 50.2001 GTEX-QEG5-1026-SM-DKPOO 1 C1 2 pieces each with 2 mm artery; small plaque 7.8 Blood Vessel Artery - Coronary 0001621 687 719 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992493 426447 0.97715 0.994455 0.832781 23389 1 76 0.00272661 279 0 1.17068e+08 0.0224508 235769 1.17721e+08 1.1691e+07 23416 5.82966e+07 0 0.144368 0.994455 0.828163 1.17068e+08 0.00305985 2.54587e+07 1.08846e+07 2.56989e+07 318 2.57575e+07 2.48882e+07 0.0028929 2.56216e+07 49.8677 0.00200277 0.996416 0 50.2347 GTEX-QEG5-1126-SM-2I5GH 1 C1 2 pieces up to 9.6x7 mm; focal hemorrhages, anthracotic pigment focally 8.1 Lung Lung 0008952 689 718 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.18223 1.62344e+06 0.851401 0.202935 0.625578 21764 1 76 0.00665828 96 0 4.6275e+07 0.146308 475143 2.28029e+08 1.53522e+08 21783 2.05373e+07 0 0.225823 0.202935 0.126952 4.6275e+07 0.0762937 7.94966e+06 8.53489e+07 8.25015e+06 103 1.01613e+07 5.74500e+06 0.0379237 9.86891e+06 49.2701 0.00208369 0.223639 0 50.9275 GTEX-QEG5-1126-SM-2M49J 1 C1 2 pieces up to 9.6x7 mm; focal hemorrhages, anthracotic pigment focally 8.1 Lung Lung 0008952 689 718 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QEG5-1126-SM-33HC2 1 C1 2 pieces up to 9.6x7 mm; focal hemorrhages, anthracotic pigment focally 8.1 Lung Lung 0008952 689 718 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.965714 398159 0.977976 0.969121 0.762544 25654 1 76 0.00264679 360 0 1.4648e+08 0.0214145 702712 1.51148e+08 1.39206e+07 25717 7.26482e+07 0 0.215432 0.969121 0.738998 1.4648e+08 0.00737868 3.26252e+07 1.40257e+07 3.30038e+07 360 3.30824e+07 2.32179e+07 0.00500442 3.30553e+07 49.9795 0.00464918 0.972528 0 50.2884 GTEX-QEG5-1126-SM-5SI88 1 C1 2 pieces up to 9.6x7 mm; focal hemorrhages, anthracotic pigment focally 8.1 Lung Lung 0008952 689 718 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989426 253690 0.97803 0.992682 0.784278 23217 1 76 0.00231449 159 0 7.41301e+07 0.0213505 337847 7.46766e+07 7.7521e+06 23249 3.68449e+07 0 0.193752 0.992682 0.778538 7.41301e+07 0.00357307 1.64894e+07 7.92576e+06 1.6687e+07 170 1.67095e+07 1.26762e+07 0.00294172 1.67054e+07 49.9939 0.00452413 0.995937 0 50.2978 GTEX-QEG5-1226-SM-447AR 1 C1 6 pieces up to 9.6x1.7 mm 6.6 Blood Vessel Artery - Aorta 0001496 691 718 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.989929 213367 0.974518 0.991778 0.783116 21803 1 76 0.00213699 131 0 6.6996e+07 0.0250804 102881 6.75514e+07 3.2673e+06 21826 3.33155e+07 0 0.191403 0.991778 0.776677 6.6996e+07 0.00277968 1.45874e+07 6.01606e+06 1.46452e+07 144 1.46878e+07 1.25579e+07 0.00245774 1.46692e+07 49.9682 0.001523 0.993626 0 50.0988 GTEX-QEG5-1326-SM-4R1JS 1 C1 6 pieces up to 7x3 mm; all are muscularis propria; re-label as Esophagus - muscularis 6.1 Esophagus Esophagus - Muscularis 0004648 693 717 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.991434 333849 0.972331 0.992976 0.772027 22621 1 76 0.0020936 131 0 6.31708e+07 0.0274516 617074 6.36176e+07 3.63315e+06 22647 3.14243e+07 0 0.200304 0.992976 0.766605 6.31708e+07 0.0028417 1.37912e+07 5.73123e+06 1.3871e+07 151 1.3847e+07 9.72884e+06 0.00246707 1.39139e+07 50.1205 0.00969974 0.994518 0 50.1443 GTEX-QEG5-1426-SM-447AS 1 C1 6 pieces up to 8.6x3 mm; all have mucosa not muscularis propria; re-label as Esophagus- mucosa; surface desquamation and separation of epithelium from lamina propria; possible chemical exposure 7.3 Esophagus Esophagus - Mucosa 0006920 695 716 BP-20332 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.991349 236180 0.972836 0.992913 0.805549 22449 1 76 0.00195065 135 0 6.84438e+07 0.0269449 234679 6.89323e+07 3.31991e+06 22469 3.40734e+07 0 0.167288 0.992913 0.79984 6.84438e+07 0.00257254 1.5332e+07 9.36804e+06 1.5437e+07 157 1.5469e+07 1.24252e+07 0.00226111 1.54078e+07 49.9009 0.00340448 0.994478 0 50.1707 GTEX-QEG5-1826-SM-4R1JP 2 C1 2 pieces 18x9 & 14x6 mm 6.2 Adrenal Gland Adrenal Gland 0002369 705 709 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990074 582774 0.957614 0.99247 0.778495 22144 1 76 0.00211427 134 0 5.9445e+07 0.0421708 2.73090e+06 5.9896e+07 3.52035e+06 22163 2.95444e+07 0 0.179119 0.99247 0.772632 5.9445e+07 0.00307232 1.28548e+07 1.29754e+07 1.2921e+07 149 1.29141e+07 8.73404e+06 0.00259214 1.30152e+07 50.195 0.0455941 0.994866 0 50.1285 GTEX-QEG5-1826-SM-CE6QW 2 C1 2 pieces 18x9 & 14x6 mm 6.2 Adrenal Gland Adrenal Gland 0002369 705 709 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.989293 462855 0.967505 0.990644 0.786758 22791 1 76 0.0081696 129 0 6.66214e+07 0.0322767 3.70595e+06 6.72507e+07 1.11313e+07 22815 3.31385e+07 0 0.180747 0.990644 0.779397 6.66214e+07 0.00756086 1.45552e+07 8.92284e+06 1.46688e+07 137 1.47095e+07 9.88376e+06 0.00786565 1.46043e+07 49.8206 0.0551065 0.991994 0 50.1944 GTEX-QEG5-2426-SM-EYYVC 3 C1 2 pieces 9x8 & 8x7 mm; glands autolyzed (3), stroma preserved (1) 5.9 Prostate Prostate 0002367 719 703 BP-20333 RNA isolation_PAXgene Tissue miRNA 11/28/2011 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985724 239793 0.964805 0.988769 0.767301 24364 1 76 0.00231992 160 0 7.25995e+07 0.0349891 454161 7.34241e+07 2.83549e+06 24397 3.60895e+07 0 0.197504 0.988769 0.758684 7.25995e+07 0.00351491 1.57889e+07 7.24514e+06 1.59807e+07 174 1.59813e+07 1.03061e+07 0.00291557 1.60021e+07 50.0326 0.00618545 0.991814 0 50.3018 GTEX-QEL4-0004-SM-2RXF3 C1 Blood Whole Blood 0013756 375 BP-20344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/28/2011 GTEx_5Mbatch5_March12 05/03/2012 Illumina OMNI SNP Array OMNI 6992629005_R03C01 GTEX-QEL4-0008-SM-447AZ C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 477 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.992474 335309 0.975933 0.994144 0.847592 20460 1 76 0.00175946 149 0 6.52949e+07 0.0236938 157950 6.56795e+07 3.19655e+06 20476 3.25239e+07 0 0.128341 0.994144 0.842628 6.52949e+07 0.00226606 1.44961e+07 7.63195e+06 1.45579e+07 146 1.45983e+07 1.51242e+07 0.00201233 1.45609e+07 49.9358 0.00240486 0.995814 0 50.1063 GTEX-QEL4-0226-SM-2TWAW 1 C1 6 ~8x3mm pieces. Squamous epithelium is ~1-2% of thickness. ~1mm layer of subcutaneous fat present in 5 pieces 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 476 1387 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0326-SM-2TWAX 1 C1 2 ~9x9mm aliquots 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 480 1384 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0326-SM-3GAE5 1 C1 2 ~9x9mm aliquots 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 480 1384 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.86835 91406 0.974935 0.87096 0.786041 20966 1 76 0.0021671 146 0 4.67155e+07 0.0247854 265252 5.36368e+07 4.15513e+06 20988 2.31747e+07 0 0.188893 0.87096 0.684611 4.67155e+07 0.00792915 1.02761e+07 3.94203e+06 1.03508e+07 156 1.0351e+07 7.27547e+06 0.00503949 1.04105e+07 50.1433 0.00494533 0.873571 0 50.1811 GTEX-QEL4-0426-SM-3GACZ 1 C1 2 ~6x5mm aliquots, ~10% interstitial/peripheral adipose tissue 6.9 Nerve Nerve - Tibial 0001323 489 1377 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.865869 184917 0.966807 0.870799 0.729687 24665 1 76 0.00262131 159 0 8.26465e+07 0.0329579 246167 9.49088e+07 1.3932e+07 24708 4.09518e+07 0 0.23712 0.870799 0.63541 8.26465e+07 0.00947614 1.80383e+07 7.67386e+06 1.82567e+07 171 1.84118e+07 1.16908e+07 0.00602932 1.83268e+07 49.8844 0.00259372 0.875729 0 50.3009 GTEX-QEL4-0526-SM-2TWAR 1 C1 2 ~3mm d aliquots, clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 495 1372 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0526-SM-3GIJ4 1 C1 2 ~3mm d aliquots, clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 495 1372 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.852792 61008 0.971495 0.856149 0.800369 19641 1 76 0.00257646 135 0 3.73042e+07 0.0281807 139202 4.35721e+07 3.70408e+06 19658 1.84913e+07 0 0.171125 0.856149 0.685235 3.73042e+07 0.00753716 8.02848e+06 2.48498e+06 8.08349e+06 149 8.09427e+06 6.02763e+06 0.00504709 8.15933e+06 50.2001 0.00319475 0.859505 0 50.1707 GTEX-QEL4-0626-SM-2TWB7 1 C1 2 ~11x6mm aliquot; <5% interstitial adipose tissue, clean specimens 7.7 Muscle Muscle - Skeletal 0011907 504 1364 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0626-SM-3GIJM 1 C1 2 ~11x6mm aliquot; <5% interstitial adipose tissue, clean specimens 7.7 Muscle Muscle - Skeletal 0011907 504 1364 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.825845 92403 0.981244 0.829372 0.862208 18889 1 76 0.00248881 133 0 5.68116e+07 0.0185781 761289 6.84996e+07 6.83526e+06 18901 2.81725e+07 0 0.119036 0.829372 0.715091 5.68116e+07 0.00777539 1.23361e+07 6.40336e+06 1.24583e+07 151 1.24446e+07 9.9028e+06 0.00512086 1.25603e+07 50.2314 0.0111138 0.832899 0 50.2465 GTEX-QEL4-0726-SM-2TWCQ 1 C1 2 ~9.5x5.5mm aliquots. Adenomatoid nodules with regressive changes 6.5 Thyroid Thyroid 0002046 516 1353 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0726-SM-3GIJ5 1 C1 2 ~9.5x5.5mm aliquots. Adenomatoid nodules with regressive changes 6.5 Thyroid Thyroid 0002046 516 1353 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.901365 148768 0.957508 0.904101 0.71161 23162 1 76 0.00262875 131 0 5.75705e+07 0.0422588 291383 6.36771e+07 5.03248e+06 23194 2.85769e+07 0 0.245898 0.904101 0.643368 5.75705e+07 0.00729077 1.24217e+07 5.88647e+06 1.25439e+07 146 1.25355e+07 7.17275e+06 0.00495271 1.25938e+07 50.116 0.00457595 0.906838 0 50.2447 GTEX-QEL4-0826-SM-2TWC4 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation 6.2 Lung Lung 0008952 520 1350 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0826-SM-325AI 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation Lung Lung 0008952 520 1350 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array EXCLUDE 8222003117_R03C01 GTEX-QEL4-0826-SM-325HZ 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation Lung Lung 0008952 520 1350 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R05C02 GTEX-QEL4-0826-SM-3GAF2 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation 6.2 Lung Lung 0008952 520 1350 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.432972 113129 0.96573 0.433765 0.70953 22591 1 76 0.00238818 138 0 4.19194e+07 0.0339159 219255 9.66408e+07 9.68545e+06 22614 2.06821e+07 0 0.256201 0.433765 0.307769 4.19194e+07 0.00868393 9.17229e+06 5.15128e+06 9.30753e+06 154 9.28651e+06 5.59010e+06 0.00553029 9.27087e+06 49.9579 0.00226876 0.434559 0 50.3659 GTEX-QEL4-0826-SM-4X62N 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation Lung Lung 0008952 520 1350 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-QEL4-0826-SM-DMRPX 2 C1 2 ~9x8mm aliquots, diffuse emphysematous changes, patchy chronic peribronchial inflammation Lung Lung 0008952 520 1350 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-QEL4-0926-SM-2TWBY 1 C1 2 9x8mm aliquots, patchy interstitial fibrosis 6.7 Heart Heart - Left Ventricle 0006566 523 1348 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QEL4-0926-SM-3GAD1 1 C1 2 9x8mm aliquots, patchy interstitial fibrosis 6.7 Heart Heart - Left Ventricle 0006566 523 1348 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.654102 98349 0.971179 0.665476 0.821992 19533 1 76 0.0027653 101 0 3.25153e+07 0.0286679 1.03689e+06 4.88602e+07 8.23157e+06 19538 1.59234e+07 0 0.149186 0.665476 0.547016 3.25153e+07 0.0112997 7.00187e+06 4.99723e+06 7.24935e+06 117 7.48044e+06 4.36104e+06 0.00695955 7.30163e+06 49.3952 0.0212216 0.67685 0 50.8683 GTEX-QEL4-1026-SM-4R1JK 1 C1 2 ~3.5x2.5mm aliquots, one with partial ~0.5mm rim of fat. Minimal/no atherosclerotic deposition 8.1 Blood Vessel Artery - Coronary 0001621 535 1337 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.991838 425169 0.975702 0.993819 0.839426 22234 1 76 0.00185927 212 0 8.79647e+07 0.0239176 207895 8.85118e+07 5.24563e+06 22247 4.37752e+07 0 0.136275 0.993819 0.834237 8.79647e+07 0.00264167 1.89484e+07 6.68661e+06 1.90927e+07 217 1.90753e+07 1.78589e+07 0.00224969 1.91327e+07 50.0751 0.00234878 0.995799 0 50.1896 GTEX-QEL4-1126-SM-4R1JJ 1 C1 6 ~9x1.5mm pieces. Minimal atherosis 7.3 Blood Vessel Artery - Aorta 0001496 530 1343 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990538 388670 0.971393 0.992301 0.763298 21711 1 76 0.00206767 130 0 6.05291e+07 0.0282922 96691 6.09987e+07 3.45185e+06 21729 3.00927e+07 0 0.208096 0.992301 0.757421 6.05291e+07 0.00289928 1.3118e+07 5.14439e+06 1.31711e+07 142 1.3161e+07 9.83811e+06 0.00248274 1.3237e+07 50.1441 0.00158513 0.994063 0 50.1009 GTEX-QEL4-1126-SM-DLZQ4 1 C1 6 ~9x1.5mm pieces. Minimal atherosis 7.3 Blood Vessel Artery - Aorta 0001496 530 1343 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.970564 500488 0.96966 0.982135 0.757868 22272 1 76 0.00258293 124 0 6.53264e+07 0.0300051 106329 6.65147e+07 4.63086e+06 22298 3.21814e+07 0 0.211792 0.982135 0.744328 6.53264e+07 0.00529698 1.39899e+07 6.70292e+06 1.4e+07 138 1.43574e+07 1.11038e+07 0.00392397 1.43538e+07 49.9936 0.00159858 0.993706 0 50.018 GTEX-QEL4-1226-SM-447A4 1 C1 2 ~7.5x7.5mm aliquots, diffuse macrovesicular steatosis and chronic hepatitis with bridging fibrosis 7.9 Liver Liver 0001114 532 1342 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.988495 260243 0.975873 0.990807 0.823528 21246 1 76 0.00197651 131 0 6.91834e+07 0.0237929 341111 6.98253e+07 3.46108e+06 21265 3.44174e+07 0 0.152345 0.990807 0.815957 6.91834e+07 0.00265619 1.51114e+07 8.44451e+06 1.51797e+07 156 1.5212e+07 1.34513e+07 0.00231556 1.52306e+07 50.0306 0.00488521 0.993119 0 50.1128 GTEX-QEL4-1326-SM-447AD 1 C1 2 ~7x6.5mm aliquots, remarkably well preserved no saponification. One aliquot with 5x0.5mm adherent fat; otherwise clean specimens 6.9 Pancreas Pancreas 0001150 537 1340 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.986943 328375 0.972969 0.989223 0.813686 20592 1 76 0.00231 96 0 5.89897e+07 0.0268583 289749 5.96323e+07 2.99874e+06 20611 2.9326e+07 0 0.159284 0.989223 0.804917 5.89897e+07 0.00308695 1.33912e+07 1.60293e+07 1.35912e+07 110 1.35921e+07 1.56682e+07 0.00269758 1.35286e+07 49.8829 0.00485892 0.991503 0 50.3705 GTEX-QEL4-1426-SM-447AC 1 C1 6 ~6x1mm pieces; squamous mucosa is 15-40% of thickness 9.4 Esophagus Esophagus - Mucosa 0006920 541 1337 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.988839 287715 0.972211 0.991177 0.766986 21704 1 76 0.00202712 116 0 5.44091e+07 0.0274667 97960 5.48934e+07 2.64647e+06 21726 2.7059e+07 0 0.205226 0.991177 0.760219 5.44091e+07 0.00271221 1.22011e+07 7.49834e+06 1.22508e+07 116 1.23122e+07 1.02804e+07 0.00236886 1.22662e+07 49.9064 0.00178455 0.993516 0 50.1016 GTEX-QEL4-1526-SM-447AB 1 C1 6 ~7x4mm pieces 6.8 Esophagus Esophagus - Muscularis 0004648 542 1336 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.986331 209538 0.969461 0.988666 0.772535 21594 1 76 0.00208644 115 0 5.45976e+07 0.0303056 443751 5.52235e+07 2.63279e+06 21614 2.71421e+07 0 0.196926 0.988666 0.76378 5.45976e+07 0.00279277 1.18295e+07 5.1934e+06 1.18891e+07 125 1.19244e+07 8.54962e+06 0.00243877 1.19166e+07 49.9836 0.00803555 0.991001 0 50.1257 GTEX-QEL4-1826-SM-EZ6KU 2 C1 6 ~8.5x4mm pieces. Urothelium is <1% of thickness, partly sloughed; some areas of cystitis cystica/ reactive changes 5.7 Bladder Bladder 0001255 550 1337 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989601 281970 0.97282 0.991098 0.808026 23914 1 76 0.00248306 278 0 1.12997e+08 0.026934 975258 1.14012e+08 8.01034e+06 23946 5.6307e+07 0 0.164793 0.991098 0.800833 1.12997e+08 0.00369869 2.43868e+07 1.03171e+07 2.45533e+07 312 2.45012e+07 1.92655e+07 0.00308996 2.45947e+07 50.0953 0.00855398 0.992594 0 50.17 GTEX-QEL4-1926-SM-4R1JI 2 C1 6 ~ 9x3/5mm pieces. Mucosa generally well-preserved, some autolysis superficially, is ~10% of thickness 8 Colon Colon - Transverse 0001157 552 1335 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.99006 318985 0.969795 0.991933 0.779284 23642 1 76 0.00241294 148 0 6.50521e+07 0.0286625 761667 6.55812e+07 3.68383e+06 23664 3.23262e+07 0 0.190511 0.991933 0.772997 6.50521e+07 0.00316953 1.43552e+07 7.91301e+06 1.45249e+07 154 1.45154e+07 9.62981e+06 0.00279052 1.448e+07 49.9389 0.0116141 0.993805 0 50.2939 GTEX-QEL4-1926-SM-D3L8D 2 C1 6 ~ 9x3/5mm pieces. Mucosa generally well-preserved, some autolysis superficially, is ~10% of thickness 8 Colon Colon - Transverse 0001157 552 1335 BP-20413 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.990446 612367 0.96865 0.992508 0.772242 26589 1 76 0.00291853 384 0 1.41444e+08 0.0299825 1.71818e+06 1.42512e+08 1.32064e+07 26654 7.03335e+07 0 0.196409 0.992508 0.766456 1.41444e+08 0.00399273 3.11697e+07 1.92227e+07 3.14073e+07 338 3.15037e+07 2.11068e+07 0.00345451 3.13391e+07 49.869 0.0120564 0.994571 0 50.1898 GTEX-QEL4-2126-SM-447AE 1 C1 2 ~9.5x6.5mm aliquots. Ductal elements visible in both 7.2 Breast Breast - Mammary Tissue 0008367 558 1331 BP-20412 RNA isolation_PAXgene Tissue miRNA 11/30/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.986972 334300 0.969789 0.98958 0.761299 22568 1 76 0.00195623 118 0 5.36621e+07 0.0299211 201062 5.42272e+07 2.77798e+06 22592 2.66483e+07 0 0.20849 0.98958 0.753366 5.36621e+07 0.00261117 1.18087e+07 5.49253e+06 1.18217e+07 123 1.18818e+07 8.76126e+06 0.00228284 1.18844e+07 50.0054 0.00370777 0.992188 0 50.0274 GTEX-QESD-0001-SM-2MRI9 B1 Blood Whole Blood 0013756 240 BP-20419 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762330006_R01C01 GTEX-QESD-0001-SM-2XK21 B1 Blood Whole Blood 0013756 240 BP-20419 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R05C01 GTEX-QESD-0001-SM-3USS1 B1 Blood Whole Blood 0013756 240 BP-20419 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QESD-0001-SM-5URC9 B1 Blood Whole Blood 0013756 240 BP-20419 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2011 LCSET-5270,LCSET-5436 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QESD-0006-SM-2I5G6 B1 8 Blood Whole Blood 0013756 240 BP-20442 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.83097 654976 0.961408 0.835955 0.788014 19396 1 76 0.00321576 119 0 8.30487e+07 0.0376659 243947 9.93459e+07 2.2138e+07 19408 4.1106e+07 0 0.173394 0.835955 0.658744 8.30487e+07 0.0112355 1.83097e+07 1.03829e+08 1.90098e+07 130 1.91693e+07 1.87474e+07 0.00720172 1.86321e+07 49.2895 0.00245553 0.84094 0 50.938 GTEX-QESD-0006-SM-2M499 B1 8 Blood Whole Blood 0013756 240 BP-20442 RNA isolation_PAXgene Blood RNA (Manual) 12/01/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QESD-0008-SM-447B2 B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 327 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.991377 378203 0.972606 0.993656 0.828748 21392 1 76 0.00172095 185 0 7.1387e+07 0.026988 236990 7.18428e+07 3.63953e+06 21412 3.55322e+07 0 0.143858 0.993656 0.823491 7.1387e+07 0.00219489 1.57972e+07 8.14155e+06 1.58886e+07 168 1.596e+07 1.53075e+07 0.00195738 1.58806e+07 49.8752 0.00329873 0.995935 0 50.1443 GTEX-QESD-0126-SM-EXOHG 1 B1 2 pieces ~10x8mm; slight congestion 5.5 Spleen Spleen 0002106 216 1411 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.985432 338002 0.961096 0.98723 0.767064 25687 1 76 0.00225381 278 0 9.1976e+07 0.0384599 1.26364e+06 9.31657e+07 5.24304e+06 25724 4.57663e+07 0 0.194032 0.98723 0.757269 9.1976e+07 0.00357929 2.02505e+07 2.07668e+07 2.03843e+07 275 2.03795e+07 1.29798e+07 0.00291534 2.04128e+07 50.0409 0.0135634 0.989028 0 50.1647 GTEX-QESD-0226-SM-447BH 1 B1 2 pieces, ~9x7 & 8x8 mm; focal atrophic lobule; <10% adipose; islets ~150um appear normal 6.2 Pancreas Pancreas 0001150 225 1403 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990997 174860 0.984216 0.993035 0.854746 18819 1 76 0.00194442 90 0 6.06477e+07 0.0155091 213532 6.1073e+07 3.02291e+06 18827 3.01832e+07 0 0.12947 0.993035 0.848793 6.06477e+07 0.00257552 1.40398e+07 1.64774e+07 1.41727e+07 101 1.41841e+07 1.81584e+07 0.00225932 1.41532e+07 49.9454 0.00349634 0.995073 0 50.2356 GTEX-QESD-0326-SM-47J4F 1 B1 2 pieces, ~2.5 mm arteries with focal eccentric plaques; ~20% peripheral adipose tissue 7.9 Blood Vessel Artery - Coronary 0001621 229 1400 BP-36881 RNA isolation_PAXgene Tissue miRNA 03/12/2013 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992017 480175 0.971629 0.994103 0.835209 21118 1 76 0.00187177 136 0 6.43139e+07 0.0279915 176791 6.46954e+07 4.08934e+06 21131 3.20035e+07 0 0.13642 0.994103 0.830284 6.43139e+07 0.00274229 1.39636e+07 6.99071e+06 1.40096e+07 153 1.4047e+07 1.21516e+07 0.00230612 1.40586e+07 50.0206 0.00273267 0.996189 0 50.0821 GTEX-QESD-0426-SM-4R1JZ 1 B1 6 pieces, up to 11x3 mm; no plaques; 2 pieces have about 40% periaortic adipose tissue 8.3 Blood Vessel Artery - Aorta 0001496 236 1393 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.993271 297893 0.976586 0.994795 0.856189 20045 1 76 0.00173063 126 0 5.67815e+07 0.0230174 97671 5.70786e+07 3.15535e+06 20059 2.82719e+07 0 0.120397 0.994795 0.851733 5.67815e+07 0.00240561 1.23981e+07 4.20524e+06 1.24698e+07 139 1.24703e+07 1.14372e+07 0.0020676 1.24862e+07 50.0319 0.00171117 0.99632 0 50.1441 GTEX-QESD-0426-SM-DKPOG 1 B1 6 pieces, up to 11x3 mm; no plaques; 2 pieces have about 40% periaortic adipose tissue 8.3 Blood Vessel Artery - Aorta 0001496 236 1393 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992801 307580 0.97712 0.994808 0.85685 21095 1 76 0.00254377 167 0 8.02149e+07 0.0224753 138216 8.06335e+07 8.04720e+06 21107 3.9947e+07 0 0.120271 0.994808 0.852401 8.02149e+07 0.00290405 1.74867e+07 6.04974e+06 1.7615e+07 192 1.7667e+07 1.65e+07 0.00272355 1.75875e+07 49.8872 0.00171413 0.996816 0 50.1826 GTEX-QESD-0526-SM-2I5G5 1 B1 2 pieces, 11x7 & 9x8.7; few contraction bands 8 Heart Heart - Left Ventricle 0006566 242 1388 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.853029 151868 0.984593 0.857405 0.860599 20470 1 76 0.00271065 264 0 9.4906e+07 0.0151492 2.80323e+06 1.1069e+08 2.41764e+07 20482 4.70677e+07 0 0.123994 0.857405 0.737882 9.4906e+07 0.0100239 2.0526e+07 1.99357e+07 2.12246e+07 282 2.11127e+07 1.44736e+07 0.00634863 2.09182e+07 49.7686 0.0253251 0.86178 0 50.8365 GTEX-QESD-0526-SM-2M498 1 B1 2 pieces, 11x7 & 9x8.7; few contraction bands 8 Heart Heart - Left Ventricle 0006566 242 1388 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QESD-0626-SM-2I5G4 0 B1 2 pieces ~8x6 mm; good morphology, no inflammation 8.3 Lung Lung 0008952 251 1380 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1168_5 02/25/2012 TruSeq.v1 RNASEQ 0.706936 130465 0.97315 0.711707 0.797071 23462 1 76 0.00304816 112 0 7.10435e+07 0.0264367 295695 9.98213e+07 2.1217e+07 23485 3.50965e+07 0 0.176079 0.711707 0.567281 7.10435e+07 0.0111081 1.55403e+07 7.34196e+06 1.57911e+07 136 1.59876e+07 1.25163e+07 0.00705114 1.57877e+07 49.6854 0.00296224 0.716479 0 50.4003 GTEX-QESD-0626-SM-2M497 0 B1 2 pieces ~8x6 mm; good morphology, no inflammation 8.3 Lung Lung 0008952 251 1380 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QESD-0726-SM-4R1KQ 1 B1 6 pieces up to 8.5x4.9 mm; good muscle layer 7 Esophagus Esophagus - Muscularis 0004648 275 1356 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.992516 257249 0.975747 0.994111 0.832997 20083 1 76 0.00173683 123 0 5.22496e+07 0.0240585 514410 5.25591e+07 3.02527e+06 20094 2.60092e+07 0 0.14275 0.994111 0.828092 5.22496e+07 0.00253119 1.13791e+07 4.81861e+06 1.14083e+07 145 1.13601e+07 7.84660e+06 0.00213337 1.15095e+07 50.3266 0.00978726 0.995707 0 50.064 GTEX-QESD-0726-SM-COH23 1 B1 6 pieces up to 8.5x4.9 mm; good muscle layer 7 Esophagus Esophagus - Muscularis 0004648 275 1356 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.993032 425076 0.974805 0.994367 0.827053 21743 1 76 0.0032805 205 0 8.19746e+07 0.0249828 886191 8.24389e+07 8.38794e+06 21764 4.08359e+07 0 0.147752 0.994367 0.822395 8.19746e+07 0.00408609 1.78045e+07 8.30389e+06 1.78978e+07 218 1.78873e+07 1.25821e+07 0.00368276 1.79138e+07 50.0371 0.0107497 0.995702 0 50.1306 GTEX-QESD-0826-SM-47J4G 1 B1 6 pieces up to 5.9x3.8 mm; good squamous mucosa 8.9 Esophagus Esophagus - Mucosa 0006920 279 1353 BP-36881 RNA isolation_PAXgene Tissue miRNA 03/12/2013 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990867 337272 0.978236 0.992957 0.833209 21631 1 76 0.00202137 173 0 8.09583e+07 0.0214013 257551 8.15325e+07 5.87864e+06 21647 4.03102e+07 0 0.145027 0.992957 0.82734 8.09583e+07 0.00285299 1.82959e+07 1.15394e+07 1.84069e+07 200 1.84791e+07 1.6801e+07 0.00243631 1.83831e+07 49.8698 0.00315887 0.995047 0 50.1513 GTEX-QESD-1426-SM-2QU4L 1 B1 6 pieces, up to ~5 x 3.8 mm; epidermis ~90um 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 326 1313 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QESD-1426-SM-2S1R9 1 B1 6 pieces, up to ~5 x 3.8 mm; epidermis ~90um 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 326 1313 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.680349 97626 0.969967 0.683782 0.812089 20734 1 76 0.00221838 120 0 3.89666e+07 0.0298556 383738 5.69868e+07 6.13547e+06 20745 1.92765e+07 0 0.157878 0.683782 0.555292 3.89666e+07 0.00867126 8.42484e+06 5.51585e+06 8.52295e+06 99 8.60068e+06 6.62788e+06 0.00542862 8.52291e+06 49.7729 0.0067338 0.687215 0 50.2895 GTEX-QESD-1526-SM-2S1QT 1 B1 2 pieces, 13x9 & 13x8 mm; large central defects, probably poorly fixed in these large aliquots 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 336 1304 BP-20480 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.650133 50931 0.973983 0.651305 0.819472 20510 1 76 0.00207169 93 0 4.39146e+07 0.0257445 257179 6.74256e+07 8.37613e+06 20518 2.17842e+07 0 0.154511 0.651305 0.533726 4.39146e+07 0.00839076 9.62755e+06 3.52944e+06 9.7599e+06 95 9.77649e+06 7.62091e+06 0.00522554 9.67575e+06 49.7411 0.00381426 0.652476 0 50.3413 GTEX-QESD-1626-SM-2QU58 1 B1 2 pieces, 10x8.6 & 9.4x7.9 mm 7.8 Muscle Muscle - Skeletal 0011907 338 1302 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QESD-1626-SM-2S1RB 1 B1 2 pieces, 10x8.6 & 9.4x7.9 mm 7.8 Muscle Muscle - Skeletal 0011907 338 1302 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.842759 90047 0.979162 0.846194 0.874989 18135 1 76 0.00185369 84 0 5.05949e+07 0.0205501 637946 5.97911e+07 6.13751e+06 18139 2.5092e+07 0 0.104172 0.846194 0.740411 5.05949e+07 0.00813043 1.06638e+07 5.50278e+06 1.08829e+07 105 1.0945e+07 1.04701e+07 0.00497932 1.07741e+07 49.6065 0.0106696 0.849629 0 50.5085 GTEX-QESD-1726-SM-2QU3X 1 B1 2 pieces, 2.5x4 & 2.5x3 mm, minimal peripheral adipose 6.6 Nerve Nerve - Tibial 0001323 351 1290 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QESD-1726-SM-2S1R7 1 B1 2 pieces, 2.5x4 & 2.5x3 mm, minimal peripheral adipose 6.6 Nerve Nerve - Tibial 0001323 351 1290 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.429433 64755 0.967836 0.430787 0.747523 20767 1 76 0.00219319 97 0 3.51384e+07 0.0318828 154364 8.15681e+07 7.0324e+06 20785 1.74027e+07 0 0.220313 0.430787 0.322023 3.51384e+07 0.00846758 7.69255e+06 3.81952e+06 7.78225e+06 97 7.82193e+06 5.14307e+06 0.00532052 7.75245e+06 49.7769 0.00189246 0.432141 0 50.2898 GTEX-QESD-2026-SM-447BI 1 B1 2 pieces ~9x8mm; central pallor; no fibrosis or inflammation 7.4 Liver Liver 0001114 367 1277 BP-20481 RNA isolation_PAXgene Tissue miRNA 12/02/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.992123 165154 0.974693 0.993609 0.847073 20700 1 76 0.00181674 108 0 5.24922e+07 0.0251604 1.03094e+06 5.28299e+07 2.38423e+06 20711 2.61425e+07 0 0.12762 0.993609 0.841659 5.24922e+07 0.00239804 1.15343e+07 6.39954e+06 1.15077e+07 122 1.15314e+07 1.08905e+07 0.00210696 1.15836e+07 50.113 0.0195143 0.995096 0 49.9422 GTEX-QLQ7-0003-SM-2MRIB B1 Blood Whole Blood 0013756 -37 BP-20534 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762330006_R02C01 GTEX-QLQ7-0003-SM-2XK22 B1 Blood Whole Blood 0013756 -37 BP-20534 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R01C01 GTEX-QLQ7-0003-SM-3USS2 B1 Blood Whole Blood 0013756 -37 BP-20534 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QLQ7-0003-SM-5URCS B1 Blood Whole Blood 0013756 -37 BP-20534 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/05/2011 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QLQ7-0005-SM-2M486 B1 8.8 Blood Whole Blood 0013756 -37 BP-20521 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-0005-SM-2S1QP B1 8.8 Blood Whole Blood 0013756 -37 BP-20521 RNA isolation_PAXgene Blood RNA (Manual) 12/05/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.613739 931720 0.912081 0.612635 0.720413 18709 1 76 0.00218564 83 0 5.686e+07 0.087544 130900 9.28123e+07 7.15850e+06 18720 2.81458e+07 0 0.191668 0.612635 0.44135 5.686e+07 0.00854825 1.18993e+07 6.00387e+07 1.21901e+07 94 1.21324e+07 1.05766e+07 0.00537268 1.18486e+07 49.4082 0.00141037 0.611531 0 50.6035 GTEX-QLQ7-0008-SM-447AW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 173 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.992703 324175 0.976504 0.994425 0.844111 20689 1 76 0.00173155 153 0 6.70019e+07 0.0231402 172548 6.73775e+07 3.19686e+06 20702 3.33734e+07 0 0.132392 0.994425 0.839405 6.70019e+07 0.00230228 1.49391e+07 8.40826e+06 1.50555e+07 147 1.51149e+07 1.60117e+07 0.00201642 1.499e+07 49.7925 0.00256091 0.996147 0 50.194 GTEX-QLQ7-0126-SM-4R1JW 1 B1 2 ~7.5x2mm aliquots, cortex only; one with 2.5x 1.5 mm nodule of fat on one end. 8.3 Adrenal Gland Adrenal Gland 0002369 75 666 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812,LCSET-4104 10/13/2013 TruSeq.v1 EXCLUDE 0.985687 423182 0.976344 0.988358 0.834242 22102 1 76 0.00216212 160 0 7.64113e+07 0.0233309 1.47803e+06 7.73113e+07 6.35803e+06 22130 3.79873e+07 0 0.142102 0.988358 0.82453 7.64113e+07 0.00321794 1.67794e+07 8.43828e+06 1.67564e+07 198 1.67444e+07 1.21054e+07 0.0026886 1.69829e+07 50.3536 0.0191179 0.99103 0 49.9658 GTEX-QLQ7-0126-SM-CL55R 1 B1 2 ~7.5x2mm aliquots, cortex only; one with 2.5x 1.5 mm nodule of fat on one end. 8.3 Adrenal Gland Adrenal Gland 0002369 75 666 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.992804 697649 0.975854 0.994507 0.827431 23352 1 76 0.00274382 371 0 1.05917e+08 0.0238174 2.43503e+06 1.06502e+08 1.33279e+07 23379 5.27257e+07 0 0.148423 0.994507 0.822886 1.05917e+08 0.00386474 2.3057e+07 1.25392e+07 2.34376e+07 339 2.34768e+07 1.65649e+07 0.00330332 2.31734e+07 49.6748 0.0228637 0.99621 0 50.4093 GTEX-QLQ7-0326-SM-4R1JV 1 B1 2 ~3x2mm aliquots, 30% occlusive calcified atherosis in one 7.5 Blood Vessel Artery - Coronary 0001621 85 656 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.99034 305557 0.974504 0.992556 0.84221 21940 1 76 0.00208313 127 0 5.72613e+07 0.0248248 241869 5.76908e+07 3.40257e+06 21951 2.84789e+07 0 0.132294 0.992556 0.835941 5.72613e+07 0.00286668 1.2477e+07 5.71711e+06 1.25411e+07 141 1.25319e+07 1.10001e+07 0.00247403 1.26169e+07 50.169 0.00419251 0.994772 0 50.128 GTEX-QLQ7-0326-SM-DHXIO 1 B1 2 ~3x2mm aliquots, 30% occlusive calcified atherosis in one 7.5 Blood Vessel Artery - Coronary 0001621 85 656 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.985533 459894 0.974942 0.986361 0.844092 23502 1 76 0.00238899 276 0 9.40278e+07 0.024322 386745 9.5328e+07 4.83814e+06 23529 4.68423e+07 0 0.130851 0.986361 0.832579 9.40278e+07 0.00287548 2.0443e+07 9.71271e+06 2.06967e+07 268 2.06591e+07 1.89532e+07 0.00263203 2.05609e+07 49.881 0.00405699 0.987188 0 50.3083 GTEX-QLQ7-0426-SM-4R1JU 1 B1 6 ~8x1.5mm pieces, mild patchy atherosis 7.8 Blood Vessel Artery - Aorta 0001496 88 653 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991676 258940 0.976393 0.993783 0.848699 20847 1 76 0.00178624 131 0 5.8738e+07 0.02318 162211 5.91055e+07 3.3013e+06 20860 2.92321e+07 0 0.127693 0.993783 0.843423 5.8738e+07 0.00251833 1.27207e+07 4.84894e+06 1.27399e+07 143 1.27476e+07 1.18015e+07 0.00215151 1.28392e+07 50.1792 0.00274443 0.995889 0 50.0377 GTEX-QLQ7-0426-SM-DHXIN 1 B1 6 ~8x1.5mm pieces, mild patchy atherosis 7.8 Blood Vessel Artery - Aorta 0001496 88 653 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.995054 400933 0.978291 0.995767 0.853021 22171 1 76 0.00220173 211 0 8.83645e+07 0.021242 245058 8.87401e+07 5.14673e+06 22187 4.40444e+07 0 0.125269 0.995767 0.849411 8.83645e+07 0.00241133 1.90854e+07 6.44383e+06 1.9297e+07 242 1.92665e+07 1.86469e+07 0.00230646 1.9179e+07 49.8861 0.00276152 0.99648 0 50.2757 GTEX-QLQ7-0526-SM-2I5G3 1 B1 2 ~9x8mm aliquots, minimal ischemic changes 7.9 Heart Heart - Left Ventricle 0006566 91 650 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.952025 173419 0.984018 0.957562 0.855018 21723 1 76 0.0032276 268 0 1.18848e+08 0.0157089 3.53403e+06 1.24116e+08 2.29016e+07 21744 5.8934e+07 0 0.129 0.957562 0.818732 1.18848e+08 0.0103001 2.58038e+07 2.83504e+07 2.63411e+07 297 2.61693e+07 1.86913e+07 0.00674342 2.6402e+07 50.2213 0.0284737 0.963099 0 50.5152 GTEX-QLQ7-0526-SM-2M496 1 B1 2 ~9x8mm aliquots, minimal ischemic changes 7.9 Heart Heart - Left Ventricle 0006566 91 650 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-0626-SM-4R1JT 1 B1 2 ~14x8mm aliquots, relatively clean, 5x2mm nodule of fat on end of one aliquot 6.8 Pancreas Pancreas 0001150 96 645 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990478 369120 0.973773 0.993047 0.837324 20505 1 76 0.0021058 115 0 5.78106e+07 0.0259956 255727 5.82154e+07 3.51438e+06 20513 2.87442e+07 0 0.136449 0.993047 0.831502 5.78106e+07 0.0029986 1.30644e+07 1.50185e+07 1.32939e+07 119 1.32459e+07 1.60905e+07 0.00255104 1.32696e+07 50.0447 0.00439277 0.995617 0 50.4353 GTEX-QLQ7-0626-SM-CE6QX 1 B1 2 ~14x8mm aliquots, relatively clean, 5x2mm nodule of fat on end of one aliquot 6.8 Pancreas Pancreas 0001150 96 645 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.988434 505277 0.978404 0.990212 0.847548 20735 1 76 0.00772989 106 0 6.37443e+07 0.0211153 303583 6.43744e+07 9.39996e+06 20746 3.16881e+07 0 0.130856 0.990212 0.839252 6.37443e+07 0.00801608 1.45515e+07 1.68863e+07 1.47394e+07 112 1.47618e+07 1.86544e+07 0.00787273 1.46428e+07 49.7975 0.00471589 0.991989 0 50.3208 GTEX-QLQ7-0726-SM-2I5G2 1 B1 2 ~9x7mm aliquots, patchy areas of regression/fibrosis 7.5 Thyroid Thyroid 0002046 103 638 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1168_6 02/25/2012 TruSeq.v1 RNASEQ 0.950599 250693 0.967945 0.956994 0.776361 25788 1 76 0.00321561 274 0 1.16828e+08 0.0313434 608269 1.22078e+08 2.34446e+07 25839 5.78386e+07 0 0.191584 0.956994 0.742973 1.16828e+08 0.0104549 2.55175e+07 1.64268e+07 2.57177e+07 277 2.59565e+07 1.94129e+07 0.00681108 2.59739e+07 50.0167 0.00498264 0.963389 0 50.1953 GTEX-QLQ7-0726-SM-2M495 1 B1 2 ~9x7mm aliquots, patchy areas of regression/fibrosis 7.5 Thyroid Thyroid 0002046 103 638 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-0826-SM-447B3 1 B1 6 ~8x3mm pieces; mucosa generally well preserved, ~20-25% of thickness 7.1 Stomach Stomach 0000945 136 605 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.977005 177939 0.981616 0.979978 0.857885 21124 1 76 0.00207091 263 0 6.03825e+07 0.0178994 641897 6.16162e+07 3.05523e+06 21138 3.00056e+07 0 0.123732 0.979978 0.840708 6.03825e+07 0.00271969 1.38916e+07 6.53437e+07 1.41086e+07 177 1.41823e+07 1.68462e+07 0.00239432 1.39949e+07 49.6674 0.0104177 0.98295 0 50.3875 GTEX-QLQ7-0926-SM-447BC 1 B1 6 ~7x2mm pieces with squamous mucosa ~10% of thickness 8.9 Esophagus Esophagus - Mucosa 0006920 124 617 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-2912,LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.991959 461862 0.975103 0.992807 0.836652 23541 1 76 0.00229767 281 0 1.07439e+08 0.0244863 548957 1.08218e+08 8.22997e+06 23560 5.35421e+07 0 0.138452 0.992807 0.830634 1.07439e+08 0.00269338 2.41094e+07 1.42241e+07 2.42774e+07 321 2.42909e+07 2.18967e+07 0.00249536 2.41894e+07 49.8953 0.0050727 0.993655 0 50.1736 GTEX-QLQ7-1026-SM-447BB 1 B1 6 ~8x2.5mm pieces 8.4 Esophagus Esophagus - Muscularis 0004648 121 620 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-2912 04/12/2013 TruSeq.v1 EXCLUDE 0.989346 290126 0.97708 0.9912 0.846211 21669 1 76 0.00187728 134 0 6.07811e+07 0.0226396 275627 6.13207e+07 3.0871e+06 21683 3.02625e+07 0 0.130869 0.9912 0.838765 6.07811e+07 0.00251004 1.33546e+07 5.95423e+06 1.34363e+07 143 1.34443e+07 1.18814e+07 0.00219307 1.34553e+07 50.0204 0.00449485 0.993055 0 50.1523 GTEX-QLQ7-1126-SM-4R1KN 1 B1 6 ~8.5x3mm pieces; mucosa is generally well-preserved, ~ 10% of thickness 8.1 Colon Colon - Transverse 0001157 131 610 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.992376 342216 0.977326 0.994301 0.842383 21759 1 76 0.00183195 138 0 6.09794e+07 0.0224007 302809 6.13289e+07 3.52454e+06 21774 3.03527e+07 0 0.134944 0.994301 0.837582 6.09794e+07 0.00251796 1.3411e+07 5.73275e+06 1.35028e+07 147 1.34831e+07 1.17567e+07 0.00217429 1.3549e+07 50.1219 0.00493746 0.996226 0 50.1704 GTEX-QLQ7-1126-SM-CYPRB 1 B1 6 ~8.5x3mm pieces; mucosa is generally well-preserved, ~ 10% of thickness 8.1 Colon Colon - Transverse 0001157 131 610 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995237 414177 0.977081 0.9959 0.840715 23332 1 76 0.0021422 283 0 1.03112e+08 0.0226327 559008 1.03536e+08 7.56588e+06 23355 5.14338e+07 0 0.136366 0.9959 0.837269 1.03112e+08 0.00244577 2.27038e+07 1.02481e+07 2.28718e+07 304 2.28293e+07 2.01212e+07 0.00229388 2.2814e+07 49.9833 0.00539914 0.996563 0 50.1843 GTEX-QLQ7-1326-SM-4R1JY 1 B1 2 ~11x8.5mm aliquots. Diffuse cystic glandular atrophy and patchy chronic prostatits 6.8 Prostate Prostate 0002367 148 593 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812,LCSET-4104 10/13/2013 TruSeq.v1 EXCLUDE 0.987295 348965 0.967666 0.990237 0.77127 24554 1 76 0.00212372 146 0 7.19974e+07 0.0319909 269176 7.27072e+07 6.08825e+06 24582 3.57861e+07 0 0.196396 0.990237 0.763741 7.19974e+07 0.00318536 1.56938e+07 7.74526e+06 1.58135e+07 165 1.58256e+07 1.11518e+07 0.00265296 1.58882e+07 50.0988 0.00370219 0.993179 0 50.19 GTEX-QLQ7-1326-SM-CNNOR 1 B1 2 ~11x8.5mm aliquots. Diffuse cystic glandular atrophy and patchy chronic prostatits 6.8 Prostate Prostate 0002367 148 593 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991423 483076 0.968737 0.993291 0.773258 26513 1 76 0.00247196 276 0 1.21625e+08 0.0308979 540453 1.22446e+08 1.31705e+07 26564 6.05708e+07 0 0.195479 0.993291 0.76807 1.21625e+08 0.00334092 2.65076e+07 1.30249e+07 2.67952e+07 310 2.68348e+07 1.92988e+07 0.00290562 2.66804e+07 49.8557 0.0044138 0.99516 0 50.2698 GTEX-QLQ7-1426-SM-4R1JX 1 B1 2 ~11x9mm aliquots. Spermatogenesis is present but appears reduced 7 Testis Testis 0000473 157 584 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.99083 309117 0.937239 0.99229 0.736097 31588 1 76 0.00208892 127 0 6.37788e+07 0.0624642 596296 6.42744e+07 3.81191e+06 31636 3.17621e+07 0 0.201142 0.99229 0.730421 6.37788e+07 0.00268862 1.35586e+07 7.65089e+06 1.36035e+07 135 1.3634e+07 1.02192e+07 0.00238833 1.36155e+07 49.9661 0.00927735 0.99375 0 50.0826 GTEX-QLQ7-1526-SM-2S1QA 1 B1 2 ~11x8m aliquots 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 175 566 BP-20570 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.858655 74091 0.971452 0.861702 0.789428 22062 1 76 0.00228315 99 0 4.95351e+07 0.0282587 349432 5.74852e+07 6.3553e+06 22086 2.45515e+07 0 0.182023 0.861702 0.680252 4.95351e+07 0.00834027 1.08016e+07 4.44538e+06 1.08935e+07 103 1.09627e+07 7.99137e+06 0.00530101 1.089e+07 49.8336 0.00607865 0.864748 0 50.2119 GTEX-QLQ7-1626-SM-2QU45 1 B1 6 ~6.5x2.5mm pieces; squamous epithelium is ~1-2% of thickness 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 178 563 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-1626-SM-2S1R8 1 B1 6 ~6.5x2.5mm pieces; squamous epithelium is ~1-2% of thickness 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 178 563 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.848465 127266 0.963378 0.851241 0.753974 24482 1 76 0.00230668 150 0 7.21946e+07 0.0364158 700906 8.4811e+07 8.89795e+06 24520 3.5811e+07 0 0.209404 0.851241 0.641814 7.21946e+07 0.0085388 1.56296e+07 7.8038e+06 1.58008e+07 144 1.58524e+07 1.05233e+07 0.00541258 1.57771e+07 49.881 0.00826433 0.854017 0 50.2723 GTEX-QLQ7-1726-SM-2M48G 1 B1 2 ~11x6mm aliquots, <5-10% interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 182 559 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-1726-SM-2S1QQ 1 B1 2 ~11x6mm aliquots, <5-10% interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 182 559 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.903324 122920 0.978031 0.906118 0.86492 19730 1 76 0.00203049 103 0 6.42937e+07 0.0216188 704120 7.09551e+07 5.92671e+06 19739 3.1906e+07 0 0.113111 0.906118 0.78372 6.42937e+07 0.008206 1.33678e+07 8.32083e+06 1.36008e+07 129 1.36531e+07 1.3197e+07 0.00510872 1.34768e+07 49.6752 0.00992346 0.908912 0 50.432 GTEX-QLQ7-1826-SM-2QU3E 1 B1 2 ~6x4mm aliquots, ~10% interstitial fat 6.4 Nerve Nerve - Tibial 0001323 191 550 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-1826-SM-2S1R5 1 B1 2 ~6x4mm aliquots, ~10% interstitial fat 6.4 Nerve Nerve - Tibial 0001323 191 550 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.918687 81819 0.969281 0.920812 0.780713 23606 1 76 0.00221208 147 0 6.92948e+07 0.0304324 421658 7.52541e+07 5.48674e+06 23640 3.44141e+07 0 0.188568 0.920812 0.71889 6.92948e+07 0.00824696 1.51761e+07 6.05588e+06 1.53056e+07 142 1.53452e+07 1.11766e+07 0.00522256 1.52738e+07 49.8834 0.00560313 0.922936 0 50.2125 GTEX-QLQ7-1926-SM-2QU3Q 1 B1 2 ~2x1mm aliquots, substantial rims of fat/fibrous tissue around both (up to 1-2mm). Focal Monckeberg's medial sclerosis noted 7 Blood Vessel Artery - Tibial 0007610 192 549 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QLQ7-1926-SM-2S1R6 1 B1 2 ~2x1mm aliquots, substantial rims of fat/fibrous tissue around both (up to 1-2mm). Focal Monckeberg's medial sclerosis noted 7 Blood Vessel Artery - Tibial 0007610 192 549 BP-20571 RNA isolation_PAXgene Tissue miRNA 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.806371 53026 0.975407 0.809858 0.832551 21343 1 76 0.00211517 105 0 5.25797e+07 0.0242299 301672 6.49246e+07 5.52633e+06 21358 2.60521e+07 0 0.142856 0.809858 0.674248 5.25797e+07 0.00845048 1.13483e+07 3.90719e+06 1.14868e+07 111 1.15634e+07 9.8539e+06 0.00526919 1.14738e+07 49.8056 0.0046465 0.813345 0 50.3031 GTEX-QLQW-0001-SM-2MRID B1 Blood Whole Blood 0013756 -104 BP-20558 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762330006_R03C01 GTEX-QLQW-0001-SM-2XK23 B1 Blood Whole Blood 0013756 -104 BP-20558 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R03C02 GTEX-QLQW-0001-SM-3USS3 B1 Blood Whole Blood 0013756 -104 BP-20558 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QLQW-0001-SM-5URCU B1 Blood Whole Blood 0013756 -104 BP-20558 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/06/2011 LCSET-5434,LCSET-5270 07/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-QLQW-0005-SM-2QU4U B1 9.2 Blood Whole Blood 0013756 -104 BP-20565 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2011 GTEX_AffyBatch5_March12 03/29/2012 Affymetrix Expression EXCLUDE GTEX-QLQW-0005-SM-2S1RA B1 9.2 Blood Whole Blood 0013756 -104 BP-20565 RNA isolation_PAXgene Blood RNA (Manual) 12/06/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.907965 810787 0.935365 0.911018 0.75688 18831 1 76 0.00224401 78 0 7.24052e+07 0.0639618 116477 7.94773e+07 6.42189e+06 18838 3.59465e+07 0 0.178485 0.911018 0.689531 7.24052e+07 0.00892403 1.59961e+07 1.09568e+08 1.6429e+07 106 1.65282e+07 1.73295e+07 0.00557283 1.6135e+07 49.398 0.00146554 0.914071 0 50.6676 GTEX-QLQW-0126-SM-447BK 1 B1 2 pieces ~8x7 mm; not congested 6.2 Spleen Spleen 0002106 77 1169 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-2912,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.987722 303682 0.965435 0.989883 0.791915 23243 1 76 0.00235433 135 0 6.5519e+07 0.0338319 330338 6.61886e+07 3.14157e+06 23264 3.25623e+07 0 0.17352 0.989883 0.783903 6.5519e+07 0.00306675 1.44414e+07 1.05622e+07 1.45076e+07 154 1.45513e+07 9.97441e+06 0.00270976 1.45352e+07 49.9722 0.00499086 0.992044 0 50.1143 GTEX-QLQW-0226-SM-447BJ 1 B1 2 pieces 9.8x2.6 & 9x1.7 mm; mostly cortex; minimal adipose 8.8 Adrenal Gland Adrenal Gland 0002369 79 1167 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.991994 241223 0.977495 0.99409 0.844337 21474 1 76 0.00204718 116 0 5.41436e+07 0.021853 475323 5.44655e+07 2.56466e+06 21489 2.69457e+07 0 0.133158 0.99409 0.839348 5.41436e+07 0.00264401 1.20073e+07 6.64665e+06 1.21214e+07 128 1.21585e+07 1.02986e+07 0.00234497 1.20728e+07 49.8232 0.00872705 0.996187 0 50.2364 GTEX-QLQW-0326-SM-447A8 1 B1 2 pieces 11.9x8 & 9x9 mm; well formed islets ~230um; focal interstitial fibrosis; ~10% interstitial fat 6.9 Pancreas Pancreas 0001150 84 1162 BP-20691 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990404 257817 0.982113 0.992301 0.856931 20255 1 76 0.00210234 90 0 6.17622e+07 0.0176219 199114 6.22414e+07 3.00745e+06 20268 3.07427e+07 0 0.125183 0.992301 0.850333 6.17622e+07 0.00274959 1.41541e+07 1.45733e+07 1.43786e+07 106 1.43734e+07 1.75227e+07 0.00242534 1.42773e+07 49.8323 0.00319906 0.994198 0 50.3934 GTEX-QLQW-0426-SM-447A7 1 B1 6 pieces up to 8x3 mm; ~540um thick mucosa; muscularis propria on 4 pieces 8.2 Colon Colon - Transverse 0001157 102 1144 BP-20691 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.987306 307646 0.974898 0.990175 0.824475 22999 1 76 0.00244603 148 0 6.61341e+07 0.0235524 722920 6.67903e+07 3.41279e+06 23020 3.28415e+07 0 0.150423 0.990175 0.816374 6.61341e+07 0.00312196 1.46643e+07 7.83024e+06 1.47827e+07 161 1.48224e+07 1.06796e+07 0.00278302 1.47963e+07 49.956 0.0108237 0.993043 0 50.2011 GTEX-QLQW-0526-SM-4R1KS 1 B1 6 pieces up to 6.7x2.8 mm' 3 pieces with hyperplastic squamous epithelium, 2 with fundic-type glandular epithelium; 1 with glandular and squamous epi.; probable reflux changes; no intestinal metaplasia 8.9 Esophagus Esophagus - Mucosa 0006920 111 1135 BP-20693 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.991807 267637 0.975342 0.993372 0.811147 22103 1 76 0.00207861 137 0 5.79075e+07 0.0241161 312980 5.82939e+07 3.32909e+06 22120 2.8831e+07 0 0.164195 0.993372 0.805771 5.79075e+07 0.00272897 1.30209e+07 7.4702e+06 1.30807e+07 135 1.30874e+07 1.08131e+07 0.00240328 1.31054e+07 50.0344 0.005369 0.994938 0 50.1146 GTEX-QLQW-0626-SM-447A6 0 B1 6 pieces up to 8.7x4.3 mm 7.5 Esophagus Esophagus - Muscularis 0004648 109 1137 BP-20693 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.987401 220204 0.974797 0.989602 0.817346 21095 1 76 0.00193525 121 0 5.42963e+07 0.0249603 320991 5.48668e+07 2.60366e+06 21112 2.70104e+07 0 0.15745 0.989602 0.808848 5.42963e+07 0.00263237 1.16981e+07 4.34361e+06 1.18174e+07 131 1.18059e+07 9.20609e+06 0.00228303 1.18276e+07 50.0459 0.00585037 0.991803 0 50.2537 GTEX-QLQW-0726-SM-447AA 1 B1 6 pieces up to 7x2 mm; good oxyntic mucosa on all, up to 0.8 mm; foveolar surface largely sloughed 6.9 Stomach Stomach 0000945 117 1129 BP-20693 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.973049 154358 0.985977 0.97544 0.873898 20359 1 76 0.0017369 267 0 6.2576e+07 0.0136654 503511 6.41515e+07 2.99359e+06 20369 3.11187e+07 0 0.11208 0.97544 0.852435 6.2576e+07 0.00235859 1.46531e+07 8.38311e+07 1.47823e+07 173 1.48485e+07 1.96341e+07 0.00204698 1.47354e+07 49.8089 0.00784878 0.977831 0 50.2194 GTEX-QLQW-1026-SM-447A9 1 B1 2 pieces 14x7 & 9x12 mm; spermatogenesis present 7.2 Testis Testis 0000473 136 1110 BP-20691 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.988659 303962 0.935735 0.990891 0.750609 31615 1 76 0.00210589 141 0 6.98227e+07 0.0639469 787063 7.04646e+07 3.65696e+06 31666 3.47502e+07 0 0.185126 0.990891 0.743772 6.98227e+07 0.00271783 1.46734e+07 1.08094e+07 1.4765e+07 146 1.48326e+07 1.17115e+07 0.00241117 1.47486e+07 49.8581 0.0111696 0.993123 0 50.1555 GTEX-QLQW-1126-SM-2S1Q8 1 B1 6 pieces up to 9x3 mm; epidermis 66um thick 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 159 1087 BP-20691 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.916894 164419 0.969877 0.91964 0.771166 24850 1 76 0.00236292 157 0 7.94998e+07 0.0299157 773869 8.64466e+07 6.76144e+06 24888 3.94488e+07 0 0.198711 0.91964 0.709195 7.94998e+07 0.00844443 1.73963e+07 8.33851e+06 1.7559e+07 158 1.76218e+07 1.24761e+07 0.00539459 1.75386e+07 49.8817 0.00895199 0.922386 0 50.2327 GTEX-QLQW-1126-SM-2TO72 1 B1 6 pieces up to 9x3 mm; epidermis 66um thick 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 159 1087 BP-20691 RNA isolation_PAXgene Tissue miRNA 12/09/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QLQW-1226-SM-2S1Q9 1 B1 2 pieces ~12x7 & 9x9 mm; up to 10% centrally empty (unfixed or fractured) 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 155 1091 BP-20693 RNA isolation_PAXgene Tissue miRNA 12/09/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.607394 64500 0.971427 0.611107 0.802093 19586 1 76 0.00225616 97 0 2.71487e+07 0.0282896 267595 4.44255e+07 4.26867e+06 19591 1.34152e+07 0 0.169335 0.611107 0.490164 2.71487e+07 0.00874842 5.96772e+06 3.11651e+06 6.03723e+06 98 6.10544e+06 4.45618e+06 0.00548257 6.0515e+06 49.7782 0.00602345 0.61482 0 50.2895 GTEX-QLQW-1326-SM-2M48H 1 B1 2 pieces: 15x11 & 9.5x9.5 mm; ~5% internal fat 8.1 Muscle Muscle - Skeletal 0011907 168 1078 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QLQW-1326-SM-2S1QS 1 B1 2 pieces: 15x11 & 9.5x9.5 mm; ~5% internal fat 8.1 Muscle Muscle - Skeletal 0011907 168 1078 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.409364 54996 0.977559 0.411644 0.86862 17274 1 76 0.00207884 92 0 2.67701e+07 0.0221846 478679 6.50323e+07 6.38145e+06 17275 1.32267e+07 0 0.108939 0.411644 0.357562 2.67701e+07 0.00880195 5.64150e+06 3.73015e+06 5.77474e+06 98 5.82498e+06 5.3063e+06 0.00542178 5.71776e+06 49.5356 0.00736064 0.413923 0 50.5836 GTEX-QLQW-1426-SM-2S1QU 1 B1 2 pieces ~3x1.5, & 2x2 mm; embedded in ~30% stroma & fat 7.1 Nerve Nerve - Tibial 0001323 170 1076 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.504989 102296 0.966977 0.504193 0.776907 22280 1 76 0.00225597 102 0 4.50977e+07 0.0327081 250602 8.94453e+07 7.19295e+06 22305 2.2302e+07 0 0.19007 0.504193 0.391711 4.50977e+07 0.00881123 9.88694e+06 5.6632e+06 1.00066e+07 95 9.955e+06 7.42169e+06 0.00553877 9.85926e+06 49.7584 0.00280174 0.503397 0 50.3008 GTEX-QLQW-1426-SM-2TO4N 1 B1 2 pieces ~3x1.5, & 2x2 mm; embedded in ~30% stroma & fat 7.1 Nerve Nerve - Tibial 0001323 170 1076 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QLQW-1526-SM-2S1QV 1 B1 2 pieces ~3x2 mm; 2 arteries and 1 vein; tissue tears (histologic); embedded in ~40% stroma 7.6 Blood Vessel Artery - Tibial 0007610 171 1075 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.234176 30408 0.972894 0.235495 0.80908 17469 1 76 0.00226544 101 0 1.31513e+07 0.0266782 70469 5.58455e+07 5.55633e+06 17473 6.35999e+06 0 0.163814 0.235495 0.190534 1.31513e+07 0.0104419 2.82918e+06 1.27585e+06 2.85969e+06 104 2.88096e+06 2.3892e+06 0.00633079 2.87527e+06 49.9506 0.00126186 0.236813 0 50.2681 GTEX-QLQW-1526-SM-2TO4Z 1 B1 2 pieces ~3x2 mm; 2 arteries and 1 vein; tissue tears (histologic); embedded in ~40% stroma 7.6 Blood Vessel Artery - Tibial 0007610 171 1075 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QLQW-1626-SM-4R1K1 1 B1 6 pieces, ~6x2.5 mm; numerous red cell casts 8.4 Kidney Kidney - Cortex 0001225 812 434 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.99309 302753 0.97826 0.994722 0.834896 23154 1 76 0.00200156 159 0 6.99617e+07 0.0215058 834256 7.0333e+07 4.06427e+06 23176 3.48442e+07 0 0.143364 0.994722 0.830489 6.99617e+07 0.00261239 1.55455e+07 7.76949e+06 1.5758e+07 179 1.56984e+07 1.14625e+07 0.00230648 1.57133e+07 50.0238 0.0118615 0.996354 0 50.3394 GTEX-QLQW-1626-SM-CMKFE 1 B1 6 pieces, ~6x2.5 mm; numerous red cell casts 8.4 Kidney Kidney - Cortex 0001225 812 434 BP-20740 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.99467 759325 0.977455 0.995529 0.824433 26174 1 76 0.00216353 379 0 1.54902e+08 0.022282 2.1366e+06 1.55597e+08 1.12572e+07 26217 7.7228e+07 0 0.153021 0.995529 0.820747 1.54902e+08 0.00257248 3.42221e+07 2.65264e+07 3.46909e+07 341 3.46492e+07 2.6686e+07 0.00236783 3.43791e+07 49.8044 0.0137316 0.996388 0 50.3401 GTEX-QMR6-0005-SM-32PKY D1 6.8 Blood Whole Blood 0013756 780 BP-20678 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.742256 2.72614e+06 0.873589 0.746345 0.671933 15141 1 76 0.00249398 82 0 7.40186e+07 0.122994 210438 9.91748e+07 1.21113e+07 15141 3.65966e+07 0 0.201655 0.746345 0.501494 7.40186e+07 0.00794352 1.54421e+07 2.22471e+08 1.61819e+07 121 1.61865e+07 1.76406e+07 0.00520382 1.5864e+07 49.4969 0.00212189 0.750434 0 51.1696 GTEX-QMR6-0008-SM-447AV D1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 791 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.992094 266280 0.975337 0.993771 0.846884 20254 1 76 0.0017024 145 0 6.17963e+07 0.0242942 127614 6.21836e+07 3.16135e+06 20268 3.07734e+07 0 0.128453 0.993771 0.841609 6.17963e+07 0.00225279 1.38151e+07 7.60983e+06 1.38989e+07 139 1.39519e+07 1.4328e+07 0.00197713 1.38627e+07 49.8397 0.00205221 0.995448 0 50.1512 GTEX-QMR6-0011-R10A-SM-32PKO D1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.774472 149042 0.965405 0.777689 0.843811 25187 1 76 0.00216604 372 0 1.13977e+08 0.034116 3.81002e+06 1.46558e+08 1.62948e+07 25228 5.65294e+07 0 0.121594 0.777689 0.656222 1.13977e+08 0.00649053 2.49736e+07 9.99116e+06 2.51112e+07 410 2.51709e+07 1.38445e+07 0.00431934 2.53371e+07 50.1646 0.0259966 0.780905 0 50.1373 GTEX-QMR6-0011-R10a-SM-AHZ7X D1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 783 ChIP-Seq GTEX-QMR6-0011-R11A-SM-32PKK D1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.860559 223436 0.948312 0.864379 0.752833 24791 1 76 0.00237363 372 0 1.22323e+08 0.0512878 2.06082e+06 1.41515e+08 1.5536e+07 24834 6.06422e+07 0 0.19548 0.864379 0.650732 1.22323e+08 0.00674567 2.63305e+07 1.22641e+07 2.64128e+07 413 2.65237e+07 1.39513e+07 0.00454999 2.67045e+07 50.1698 0.0145625 0.868199 0 50.078 GTEX-QMR6-0011-R1A-SM-32PKW D1, A1 6.1 Brain Brain - Hippocampus 0001954 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.582475 147864 0.963082 0.583843 0.847658 22199 1 76 0.002135 377 0 1.07817e+08 0.0364117 5.01053e+06 1.84667e+08 2.01821e+07 22224 5.34847e+07 0 0.115424 0.583843 0.494899 1.07817e+08 0.00633833 2.36944e+07 9.51371e+06 2.41461e+07 432 2.38258e+07 1.26946e+07 0.00423174 2.42555e+07 50.4469 0.0271328 0.585211 0 50.4721 GTEX-QMR6-0011-R2A-SM-32PKV D1, A1 7.3 Brain Brain - Substantia nigra 0002038 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.948861 186518 0.968345 0.951834 0.845699 25451 1 76 0.00216277 522 0 1.56382e+08 0.0313098 6.84822e+06 1.64295e+08 1.65527e+07 25495 7.76943e+07 0 0.122646 0.951834 0.804966 1.56382e+08 0.00641912 3.46145e+07 1.27904e+07 3.50512e+07 537 3.48247e+07 1.7763e+07 0.0042843 3.52679e+07 50.3162 0.0416823 0.954807 0 50.3134 GTEX-QMR6-0011-R4A-SM-32PKU D1, A1 6.6 Brain Brain - Amygdala 0001876 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.434645 57683 0.965107 0.439631 0.845244 21146 1 76 0.00227785 114 0 3.87338e+07 0.0346152 2.50432e+06 8.81052e+07 1.13204e+07 21157 1.90133e+07 0 0.119863 0.439631 0.371596 3.87338e+07 0.00735116 8.46862e+06 4.2759e+06 8.59777e+06 125 8.68493e+06 3.87285e+06 0.00478574 8.79438e+06 50.3131 0.0284242 0.444617 0 50.3784 GTEX-QMR6-0011-R5A-SM-32PKT D1, A1 6.8 Brain Brain - Caudate (basal ganglia) 0001873 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.825099 201080 0.966591 0.828327 0.838422 24672 1 76 0.0022049 519 0 1.17972e+08 0.0331309 7.34988e+06 1.42422e+08 1.65069e+07 24707 5.85594e+07 0 0.128169 0.828327 0.694488 1.17972e+08 0.00641134 2.6046e+07 1.41298e+07 2.62459e+07 460 2.61387e+07 1.13334e+07 0.00429992 2.65606e+07 50.4003 0.0516063 0.831556 0 50.1911 GTEX-QMR6-0011-R6A-SM-32PKP D1, A1 8.1 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.973801 274224 0.959727 0.977116 0.81699 26466 1 76 0.00226426 519 0 1.56126e+08 0.0398407 5.50626e+06 1.59783e+08 1.58015e+07 26517 7.75232e+07 0 0.142738 0.977116 0.798293 1.56126e+08 0.00662427 3.4018e+07 1.38067e+07 3.42907e+07 535 3.4316e+07 1.86613e+07 0.00443687 3.44676e+07 50.1102 0.0344609 0.98043 0 50.1996 GTEX-QMR6-0011-R7A-SM-32PKL D1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.983095 352657 0.967104 0.986211 0.84722 24354 1 76 0.00221399 518 0 1.53513e+08 0.0326297 1.09979e+07 1.5566e+08 1.42822e+07 24389 7.62716e+07 0 0.119884 0.986211 0.835537 1.53513e+08 0.00651063 3.40388e+07 1.99547e+07 3.43508e+07 535 3.40112e+07 1.2998e+07 0.00435552 3.47974e+07 50.5713 0.0706535 0.989326 0 50.2281 GTEX-QMR6-0011-R8A-SM-32PKJ D1, A1 8.4 Brain Brain - Hypothalamus 0001898 783 BP-20819 RNA isolation_PAXgene Tissue miRNA 12/14/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.884615 196214 0.96241 0.887305 0.825496 26120 1 76 0.00221029 520 0 1.21013e+08 0.0370251 2.30272e+06 1.36382e+08 1.39054e+07 26160 6.00946e+07 0 0.136914 0.887305 0.732466 1.21013e+08 0.00630634 2.66046e+07 9.58046e+06 2.66664e+07 437 2.67245e+07 1.70947e+07 0.00425211 2.68843e+07 50.149 0.0168843 0.889994 0 50.058 GTEX-QMR6-1326-SM-32PLB 2 D1 4 ~6x5mm aliquots 6.9 Brain Brain - Cerebellum 0002037 881 1148 BP-20743 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.971053 452562 0.944127 0.974951 0.719655 25976 1 76 0.00245951 519 0 1.50685e+08 0.0555694 2.6332e+06 1.54556e+08 1.48248e+07 26038 7.47412e+07 0 0.224473 0.974951 0.701628 1.50685e+08 0.0072248 3.23228e+07 2.0689e+07 3.25952e+07 508 3.26317e+07 1.52947e+07 0.00483263 3.28183e+07 50.1426 0.0170371 0.978848 0 50.2098 GTEX-QMR6-1426-SM-32PLA 1 D1 4 ~6x4mm aliquots 6.9 Brain Brain - Cortex 0001870 883 1146 BP-20743 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.966568 576815 0.956408 0.970276 0.810589 25725 1 76 0.00230737 518 0 1.2539e+08 0.0431835 3.30352e+06 1.29231e+08 1.26549e+07 25766 6.22458e+07 0 0.145819 0.970276 0.786494 1.2539e+08 0.00685081 2.73379e+07 2.28417e+07 2.74994e+07 486 2.74721e+07 1.47324e+07 0.00457041 2.78023e+07 50.2987 0.0255629 0.973983 0 50.1473 GTEX-QMR6-1926-SM-2XK2D 3 D1 2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing Lung Lung 0008952 808 1239 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R06C01 GTEX-QMR6-1926-SM-32PL9 3 D1 2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing 6 Lung Lung 0008952 808 1239 BP-20743 RNA isolation_PAXgene Tissue miRNA 12/12/2011 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.693197 228114 0.969231 0.694448 0.739388 24279 1 76 0.00255686 376 0 1.39352e+08 0.0303108 390636 2.00666e+08 2.34241e+07 24339 6.89342e+07 0 0.229843 0.694448 0.513467 1.39352e+08 0.00706164 3.06328e+07 1.50867e+07 3.0778e+07 371 3.06761e+07 2.08553e+07 0.00480519 3.09776e+07 50.2445 0.0019467 0.695699 0 50.1183 GTEX-QMR6-1926-SM-3L285 3 D1 2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing Lung Lung 0008952 808 1239 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_Batch8_rOM5_Sept12 09/23/2012 Illumina OMNI SNP Array OMNI 8514840003_R02C01 GTEX-QMR6-1926-SM-4SVPX 3 D1 2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing Lung Lung 0008952 808 1239 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-QMR6-1926-SM-7DRQ1 3 D1 2 ~10x7mm aliquots, patchy dense congestion. Bronchiolar lining badly sloughing Lung Lung 0008952 808 1239 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QMRM-0002-SM-2MRIF B1 Blood Whole Blood 0013756 -32 BP-20681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762330006_R04C01 GTEX-QMRM-0002-SM-2XK25 B1 Blood Whole Blood 0013756 -32 BP-20681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R01C01 GTEX-QMRM-0002-SM-3UZFK B1 Blood Whole Blood 0013756 -32 BP-20681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2011 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-QMRM-0002-SM-5URC1 B1 Blood Whole Blood 0013756 -32 BP-20681 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/09/2011 LCSET-5270,LCSET-5435 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QMRM-0005-SM-2M48F B1 9.5 Blood Whole Blood 0013756 -32 BP-20678 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QMRM-0005-SM-2S1QR B1 9.5 Blood Whole Blood 0013756 -32 BP-20678 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2011 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.513559 348068 0.914586 0.51692 0.758231 16700 1 76 0.00240157 93 0 2.40774e+07 0.0850688 90136 4.65786e+07 1.46788e+07 16702 1.19012e+07 0 0.156354 0.51692 0.391945 2.40774e+07 0.0091418 4.98958e+06 2.33193e+07 5.1595e+06 103 5.22919e+06 4.79282e+06 0.00574977 5.06291e+06 49.1922 0.00193514 0.52028 0 50.8371 GTEX-QMRM-0005-SM-3NB2A B1 9.5 Blood Whole Blood 0013756 -32 BP-20678 RNA isolation_PAXgene Blood RNA (Manual) 12/09/2011 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.981685 1.0388e+06 0.957039 0.986385 0.806334 21065 1 76 0.00435253 187 0 1.1124e+08 0.0423274 381572 1.12776e+08 2.0499e+07 21080 5.51678e+07 0 0.150705 0.986385 0.795355 1.1124e+08 0.00639208 2.43059e+07 7.63111e+07 2.46347e+07 204 2.48006e+07 2.37703e+07 0.00536745 2.46623e+07 49.8603 0.00338345 0.991084 0 50.3359 GTEX-QMRM-0008-SM-447B1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 206 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.989883 348345 0.974516 0.99281 0.839793 20678 1 76 0.00173204 137 0 6.01738e+07 0.0250894 154269 6.06095e+07 2.85376e+06 20694 2.99309e+07 0 0.134723 0.99281 0.833755 6.01738e+07 0.00229159 1.33904e+07 7.31966e+06 1.35086e+07 132 1.3602e+07 1.42146e+07 0.00201099 1.34679e+07 49.7524 0.00254529 0.995737 0 50.2196 GTEX-QMRM-0126-SM-4R1K9 0 B1 2 pieces 17x6.8 & 8.5x7.6 mm; cortex and medulla, slightly nodular;<10% adipose 9.1 Adrenal Gland Adrenal Gland 0002369 88 1014 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.993257 390076 0.975435 0.994656 0.833462 21787 1 76 0.00184748 135 0 6.41625e+07 0.0241865 919965 6.45072e+07 3.70492e+06 21809 3.19539e+07 0 0.141973 0.994656 0.829008 6.41625e+07 0.00249716 1.41493e+07 7.45032e+06 1.42578e+07 158 1.42625e+07 1.1003e+07 0.00217186 1.42328e+07 49.9478 0.0142614 0.996056 0 50.1911 GTEX-QMRM-0126-SM-CJI1R 0 B1 2 pieces 17x6.8 & 8.5x7.6 mm; cortex and medulla, slightly nodular;<10% adipose 9.1 Adrenal Gland Adrenal Gland 0002369 88 1014 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.992767 1.24974e+06 0.977756 0.994054 0.842681 23432 1 76 0.0019413 375 0 1.14022e+08 0.021887 1.81735e+06 1.14704e+08 7.12645e+06 23460 5.67692e+07 0 0.135074 0.994054 0.837671 1.14022e+08 0.00225197 2.50765e+07 1.44896e+07 2.53576e+07 335 2.54849e+07 2.08846e+07 0.00209643 2.50728e+07 49.5924 0.0158438 0.995342 0 50.2787 GTEX-QMRM-0226-SM-4R1K7 1 B1 2 pieces 9x6 & 9x7 mm 7.2 Spleen Spleen 0002106 90 1012 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.989924 406721 0.96113 0.991897 0.779056 22988 1 76 0.00225918 129 0 6.11003e+07 0.0382264 296619 6.15995e+07 3.66521e+06 23016 3.03963e+07 0 0.182073 0.991897 0.772743 6.11003e+07 0.00298731 1.33638e+07 1.05126e+07 1.34815e+07 145 1.34874e+07 9.5665e+06 0.00262252 1.348e+07 49.9863 0.00481528 0.99387 0 50.2191 GTEX-QMRM-0226-SM-CL55S 1 B1 2 pieces 9x6 & 9x7 mm 7.2 Spleen Spleen 0002106 90 1012 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.991024 729152 0.965111 0.992589 0.784773 24739 1 76 0.00301526 208 0 9.94246e+07 0.0342373 556540 1.00167e+08 1.24886e+07 24778 4.94771e+07 0 0.180338 0.992589 0.778957 9.94246e+07 0.00406343 2.18363e+07 1.31781e+07 2.20049e+07 245 2.20405e+07 1.54099e+07 0.00353852 2.19557e+07 49.9036 0.00555612 0.994153 0 50.1922 GTEX-QMRM-0326-SM-4R1K5 1 B1 2 pieces 14x7 & 8x7 mm; islets up to 334 um. <5% peripheral fat 7.4 Pancreas Pancreas 0001150 94 1008 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991469 353158 0.976138 0.993144 0.846124 20374 1 76 0.00213264 103 0 5.90233e+07 0.0235926 138891 5.94307e+07 3.44832e+06 20385 2.93927e+07 0 0.130014 0.993144 0.840323 5.90233e+07 0.00291741 1.34583e+07 1.44851e+07 1.37277e+07 110 1.3702e+07 1.6715e+07 0.00252436 1.3587e+07 49.7892 0.00233702 0.994819 0 50.4955 GTEX-QMRM-0326-SM-CKZNB 1 B1 2 pieces 14x7 & 8x7 mm; islets up to 334 um. <5% peripheral fat 7.4 Pancreas Pancreas 0001150 94 1008 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.991007 591578 0.980663 0.993417 0.843109 22189 1 76 0.00220576 130 0 9.77303e+07 0.0189799 235946 9.83779e+07 9.80525e+06 22215 4.86292e+07 0 0.137555 0.993417 0.837558 9.77303e+07 0.00356679 2.24595e+07 2.14663e+07 2.27124e+07 150 2.27896e+07 2.88641e+07 0.00288462 2.2612e+07 49.8044 0.00239836 0.995827 0 50.2799 GTEX-QMRM-0426-SM-4R1K2 1 B1 2 ~3.3 mm; no sclerosis; slight histologic tears; ~15% peripheral adipose 8.1 Blood Vessel Artery - Coronary 0001621 100 1002 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.993695 1.95704e+06 0.973326 0.994917 0.845218 27846 1 76 0.00185796 541 0 4.10363e+08 0.0261949 2.28495e+06 4.12459e+08 2.27837e+07 27923 2.04275e+08 0 0.128108 0.994917 0.840922 4.10363e+08 0.00262395 8.85021e+07 3.71175e+07 8.88348e+07 582 8.86134e+07 8.06541e+07 0.00224048 8.92511e+07 50.1793 0.00553983 0.996139 0 50.0938 GTEX-QMRM-0526-SM-2I5GA 1 B1 2 pieces 8x7 & 7x7 mm; slight histologic tears 8.4 Heart Heart - Left Ventricle 0006566 104 998 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1168_6 04/02/2012 TruSeq.v1 RNASEQ 0.689529 141668 0.981754 0.699252 0.849555 21477 1 76 0.00344558 151 0 8.64893e+07 0.0178027 2.64594e+06 1.23688e+08 3.43496e+07 21492 4.24011e+07 0 0.132199 0.699252 0.594053 8.64893e+07 0.0137026 1.84985e+07 2.17476e+07 1.91441e+07 181 1.93114e+07 1.21494e+07 0.00850276 1.92334e+07 49.8987 0.021392 0.708975 0 50.8576 GTEX-QMRM-0526-SM-2M49C 1 B1 2 pieces 8x7 & 7x7 mm; slight histologic tears 8.4 Heart Heart - Left Ventricle 0006566 104 998 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QMRM-0626-SM-447BQ 1 B1 6 pieces up to 10x1.5 mm; 7.8 Blood Vessel Artery - Aorta 0001496 111 991 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.982794 268212 0.972909 0.98519 0.835846 21464 1 76 0.00192934 129 0 6.13786e+07 0.0266651 172524 6.23012e+07 3.0119e+06 21482 3.05084e+07 0 0.137063 0.98519 0.823467 6.13786e+07 0.0026166 1.32233e+07 5.04647e+06 1.32856e+07 142 1.33452e+07 1.18616e+07 0.00227214 1.33071e+07 49.9284 0.00276919 0.987586 0 50.1174 GTEX-QMRM-0726-SM-2I5G8 1 B1 2 pieces 11x8 & 9x7 mm; slightly nodular; peripheral cassette marks 7.5 Thyroid Thyroid 0002046 115 987 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.522926 169813 0.964595 0.531774 0.759861 25539 1 76 0.00403065 110 0 8.67347e+07 0.0350293 560065 1.63104e+08 6.02423e+07 25586 4.24159e+07 0 0.204734 0.531774 0.404074 8.67347e+07 0.0279698 1.85972e+07 1.32117e+07 1.88677e+07 129 1.94618e+07 1.36911e+07 0.0158011 1.93051e+07 49.7979 0.00343378 0.540621 0 50.361 GTEX-QMRM-0726-SM-2M49B 1 B1 2 pieces 11x8 & 9x7 mm; slightly nodular; peripheral cassette marks 7.5 Thyroid Thyroid 0002046 115 987 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QMRM-0826-SM-2I5G7 1 B1 2 pieces 11.6x10 & 9x8 mm; no inflammation 8.9 Lung Lung 0008952 119 983 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1168_5 04/02/2012 TruSeq.v1 EXCLUDE 0.326641 179063 0.963041 0.341784 0.76906 24104 1 76 0.00398286 99 0 6.05221e+07 0.0357812 276088 1.77077e+08 5.43633e+07 24127 2.86948e+07 0 0.19398 0.341784 0.262852 6.05221e+07 0.0689786 1.25538e+07 1.20914e+07 1.28882e+07 103 1.40966e+07 9.9827e+06 0.0350409 1.38124e+07 49.4908 0.00155914 0.356927 0 50.6573 GTEX-QMRM-0826-SM-2M49A 1 B1 2 pieces 11.6x10 & 9x8 mm; no inflammation 8.9 Lung Lung 0008952 119 983 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEx_Batch4Affy_Jan2012 02/07/2012 Affymetrix Expression EXCLUDE GTEX-QMRM-0826-SM-3NB33 1 B1 2 pieces 11.6x10 & 9x8 mm; no inflammation 8.8 Lung Lung 0008952 119 983 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984623 802205 0.963736 0.989252 0.764862 25711 1 76 0.00406605 209 0 1.02728e+08 0.0358917 325108 1.03844e+08 1.81315e+07 25761 5.09382e+07 0 0.198874 0.989252 0.756641 1.02728e+08 0.00594316 2.24370e+07 1.70584e+07 2.26122e+07 225 2.27691e+07 1.66241e+07 0.00500021 2.27509e+07 49.98 0.00313072 0.993882 0 50.1943 GTEX-QMRM-0926-SM-447BR 0 B1 6 pieces ~ 8x4 mm; good neurons 7.9 Esophagus Esophagus - Muscularis 0004648 133 969 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990342 231823 0.974573 0.99236 0.837419 21328 1 76 0.00188303 137 0 6.02198e+07 0.0251493 453168 6.06834e+07 2.88375e+06 21341 2.99734e+07 0 0.137154 0.99236 0.831021 6.02198e+07 0.00254237 1.29757e+07 5.21054e+06 1.30326e+07 147 1.30398e+07 1.04345e+07 0.00221203 1.30804e+07 50.0778 0.00746774 0.994378 0 50.1095 GTEX-QMRM-1126-SM-447BN 1 B1 6 pieces up to 10x4.7 mm; good mucosal preservation, up to 1mm thick 7.1 Stomach Stomach 0000945 142 960 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.983539 191929 0.980452 0.986288 0.848401 21832 1 76 0.00196498 254 0 6.23762e+07 0.0189761 389723 6.32434e+07 3.19580e+06 21846 3.10052e+07 0 0.132051 0.986288 0.836768 6.23762e+07 0.00261916 1.42742e+07 5.58134e+07 1.43811e+07 181 1.44454e+07 1.5622e+07 0.00229116 1.43767e+07 49.8809 0.00616227 0.989036 0 50.1865 GTEX-QMRM-1226-SM-447C6 1 B1 6 pieces up to 6.5x3 mm; good mucosal preservation; moderate histologic tissue tears 7.8 Colon Colon - Transverse 0001157 148 954 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.9899 280789 0.975604 0.991893 0.848066 22949 1 76 0.00224133 169 0 7.34542e+07 0.0224817 498177 7.40546e+07 3.13532e+06 22966 3.64887e+07 0 0.127537 0.991893 0.841191 7.34542e+07 0.00292354 1.62922e+07 7.99855e+06 1.63125e+07 190 1.63595e+07 1.30957e+07 0.00258175 1.63847e+07 50.0384 0.00672716 0.993886 0 50.0311 GTEX-QMRM-1426-SM-4R1K8 1 B1 2 pieces 11x8 & 9x7 mm; focally nodular; one surface has prostatic urethra; one large peripheral defect 4x1.5 mm 6.7 Prostate Prostate 0002367 165 937 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812,LCSET-4104 10/13/2013 TruSeq.v1 EXCLUDE 0.984413 529872 0.962525 0.989433 0.772911 25108 1 76 0.00206796 169 0 7.73515e+07 0.0372205 589891 7.81776e+07 7.08264e+06 25139 3.83532e+07 0 0.189614 0.989433 0.764744 7.73515e+07 0.00333403 1.67659e+07 1.16063e+07 1.69781e+07 190 1.70358e+07 1.10476e+07 0.00269778 1.70807e+07 50.0658 0.00754552 0.994453 0 50.3145 GTEX-QMRM-1426-SM-CM2U2 1 B1 2 pieces 11x8 & 9x7 mm; focally nodular; one surface has prostatic urethra; one large peripheral defect 4x1.5 mm 6.7 Prostate Prostate 0002367 165 937 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.993025 362634 0.964679 0.994321 0.777401 25200 1 76 0.00207906 208 0 8.55562e+07 0.0350933 705201 8.60448e+07 5.45984e+06 25247 4.26106e+07 0 0.187279 0.994321 0.772986 8.55562e+07 0.00277134 1.8677e+07 9.69922e+06 1.88359e+07 224 1.88301e+07 1.22992e+07 0.00242475 1.879e+07 49.9467 0.00819574 0.995617 0 50.2119 GTEX-QMRM-1526-SM-4R1K6 1 B1 2 pieces 10x8 & 7x6 mm. spermatogenesis 7.2 Testis Testis 0000473 172 930 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.99076 375981 0.935381 0.992211 0.746865 31333 1 76 0.00199217 133 0 6.18575e+07 0.0643455 873833 6.23431e+07 3.51076e+06 31379 3.07993e+07 0 0.188516 0.992211 0.741047 6.18575e+07 0.00265344 1.30314e+07 7.67136e+06 1.31098e+07 137 1.31238e+07 9.70275e+06 0.00232232 1.30997e+07 49.954 0.0140165 0.993662 0 50.1501 GTEX-QMRM-1626-SM-4R1KV 1 B1 2 pieces 15.7x9 & 11x10 mm; central defects probable fixation effects; no mammary ducts, only adipose and a few fibrous strands 7 Breast Breast - Mammary Tissue 0008367 181 921 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991842 289200 0.974572 0.993518 0.814443 21389 1 76 0.00193429 130 0 5.59356e+07 0.025172 504816 5.63005e+07 3.24365e+06 21410 2.78402e+07 0 0.160129 0.993518 0.809164 5.59356e+07 0.00270581 1.23948e+07 5.6512e+06 1.24007e+07 148 1.23782e+07 8.40476e+06 0.00231939 1.25131e+07 50.2711 0.00896646 0.995195 0 50.0118 GTEX-QMRM-1626-SM-D4P1U 1 B1 2 pieces 15.7x9 & 11x10 mm; central defects probable fixation effects; no mammary ducts, only adipose and a few fibrous strands 7 Breast Breast - Mammary Tissue 0008367 181 921 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993909 393552 0.974563 0.995264 0.811585 23976 1 76 0.0023777 375 0 1.14273e+08 0.0251516 1.10803e+06 1.14817e+08 1.30789e+07 24013 5.69608e+07 0 0.162978 0.995264 0.807742 1.14273e+08 0.00356884 2.51052e+07 1.39991e+07 2.54318e+07 341 2.54662e+07 1.73333e+07 0.00297246 2.52141e+07 49.7512 0.00965037 0.996618 0 50.3231 GTEX-QMRM-1726-SM-2S1QG 1 B1 2 pieces 14.6x11 &9x6 mm; central (probable fixation) defects 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 204 898 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.683336 45223 0.971692 0.688377 0.803335 20327 1 76 0.00223042 94 0 2.9462e+07 0.0279974 209401 4.27992e+07 4.44626e+06 20333 1.4537e+07 0 0.168356 0.688377 0.552997 2.9462e+07 0.00875347 6.40024e+06 2.80656e+06 6.48809e+06 97 6.57987e+06 4.87915e+06 0.00546806 6.50659e+06 49.72 0.00489264 0.693418 0 50.3408 GTEX-QMRM-1726-SM-2TO4I 1 B1 2 pieces 14.6x11 &9x6 mm; central (probable fixation) defects 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 204 898 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV31-0003-SM-2MRI2 B1 Blood Whole Blood 0013756 -179 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321106_R01C01 GTEX-QV31-0003-SM-2XK27 B1 Blood Whole Blood 0013756 -179 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R05C01 GTEX-QV31-0003-SM-3USS6 B1 Blood Whole Blood 0013756 -179 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QV31-0003-SM-5URDH B1 Blood Whole Blood 0013756 -179 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QV31-0005-SM-2S1Q6 B1 8.3 Blood Whole Blood 0013756 -179 BP-20770 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2011 TruSeq.v1 EXCLUDE 0.114047 87296 0.927014 0.108583 0.731273 15095 1 76 0.00256644 88 0 8.20578e+06 0.0725764 35418 7.55714e+07 8.58229e+06 15095 3.82591e+06 0 0.195741 0.108583 0.0794039 8.20578e+06 0.0158248 1.82756e+06 5.24456e+06 1.87876e+06 99 1.68048e+06 1.40655e+06 0.00952921 1.626e+06 49.1761 0.000468669 0.103119 0 50.6908 GTEX-QV31-0005-SM-2TO5P B1 8.3 Blood Whole Blood 0013756 -179 BP-20770 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV31-0006-SM-793B5 B1 8.1 Blood Whole Blood 0013756 -179 BP-20770 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2011 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.993388 575604 0.952097 0.994463 0.776847 18202 1 76 0.00254832 94 0 5.42321e+07 0.0476157 189643 5.4534e+07 4.75756e+06 18216 2.70237e+07 0 0.17525 0.994463 0.772546 5.42321e+07 0.00289224 1.18928e+07 2.90913e+07 1.18957e+07 110 1.19315e+07 1.04171e+07 0.00272009 1.19106e+07 49.9562 0.00347752 0.995539 0 50.0061 GTEX-QV31-0008-SM-447AT B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 221 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.991247 434335 0.971825 0.993723 0.838968 21183 1 76 0.0017722 217 0 7.66279e+07 0.0277853 236271 7.7112e+07 3.85397e+06 21199 3.81406e+07 0 0.132857 0.993723 0.833702 7.66279e+07 0.0024245 1.70233e+07 1.14223e+07 1.70997e+07 205 1.71967e+07 1.6599e+07 0.00209754 1.71051e+07 49.8665 0.003064 0.996199 0 50.1119 GTEX-QV31-0126-SM-447BP 2 B1 2 8x6mm aliquots 6.5 Spleen Spleen 0002106 153 1087 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.98711 250611 0.966363 0.989278 0.807059 22829 1 76 0.00226798 132 0 6.18542e+07 0.0328741 356567 6.25246e+07 3.02716e+06 22850 3.07472e+07 0 0.159304 0.989278 0.798406 6.18542e+07 0.00298926 1.36484e+07 8.0104e+06 1.36976e+07 149 1.37273e+07 9.71593e+06 0.00262783 1.37482e+07 50.0381 0.00570283 0.991447 0 50.0899 GTEX-QV31-0226-SM-447BO 1 B1 2 ~7x6mm aliquots, good clean specimens with no peripancreatic fat; ~5% interstitial fat/fibrous tissue 6.2 Pancreas Pancreas 0001150 157 1084 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.989586 309977 0.972707 0.991575 0.853666 20046 1 76 0.00207571 93 0 6.06732e+07 0.027067 204456 6.11888e+07 3.05625e+06 20057 3.01921e+07 0 0.119041 0.991575 0.846474 6.06732e+07 0.0027829 1.39078e+07 1.85179e+07 1.40696e+07 104 1.40757e+07 1.77137e+07 0.0024286 1.40276e+07 49.9144 0.0033414 0.993564 0 50.2891 GTEX-QV31-0326-SM-447BM 0 B1 6 ~10x1.5mm pieces, a few with adherent layer of ~0.5mm fibrous tissue on serosal edges 8.5 Blood Vessel Artery - Aorta 0001496 161 1081 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.991371 337839 0.974592 0.992967 0.842725 21040 1 76 0.00183046 137 0 6.78809e+07 0.0250464 160714 6.83616e+07 3.00229e+06 21052 3.37903e+07 0 0.131867 0.992967 0.836798 6.78809e+07 0.00254665 1.47189e+07 5.02352e+06 1.47789e+07 158 1.47958e+07 1.33514e+07 0.00218798 1.4809e+07 50.0222 0.00235094 0.994563 0 50.1017 GTEX-QV31-0426-SM-447C4 0 B1 6 ~5x4mm pieces. Non keratinizing squamous mucosa is ~10-20% of thickness 9.6 Esophagus Esophagus - Mucosa 0006920 170 1074 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 EXCLUDE 0.989815 203683 0.97533 0.992302 0.847037 20817 1 76 0.00190371 119 0 5.40234e+07 0.0244187 372376 5.44425e+07 2.59338e+06 20827 2.68739e+07 0 0.128293 0.992302 0.840516 5.40234e+07 0.00255092 1.15906e+07 4.4278e+06 1.16458e+07 133 1.1653e+07 9.51211e+06 0.00222651 1.17101e+07 50.1221 0.0068398 0.994788 0 50.1189 GTEX-QV31-0526-SM-447C3 0 B1 6 ~6x4mm pieces 8.1 Esophagus Esophagus - Muscularis 0004648 170 1075 BP-20785 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 EXCLUDE 0.988335 302182 0.977352 0.991322 0.846506 21490 1 76 0.00201463 148 0 6.64507e+07 0.0220903 369395 6.70325e+07 3.23255e+06 21502 3.30357e+07 0 0.130846 0.991322 0.83916 6.64507e+07 0.00272736 1.49507e+07 8.70954e+06 1.50309e+07 151 1.51061e+07 1.42714e+07 0.00236992 1.50697e+07 49.9397 0.00551069 0.994309 0 50.1337 GTEX-QV31-0626-SM-447C5 1 B1 6 ~6x4mm pieces; mucosa well-preserved, ~25% of thickness in most pieces 7.5 Stomach Stomach 0000945 174 1072 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.984219 215888 0.979383 0.987344 0.847505 21039 1 76 0.00189925 227 0 5.51279e+07 0.0201975 450213 5.58345e+07 2.61028e+06 21050 2.73742e+07 0 0.131878 0.987344 0.836779 5.51279e+07 0.00251872 1.26922e+07 4.5833e+07 1.26778e+07 153 1.27586e+07 1.35966e+07 0.00220801 1.27789e+07 50.0398 0.00806334 0.99047 0 49.9716 GTEX-QV31-0726-SM-2TO6J 0 B1 2 ~9x8mm aliquots, one with ~1.5mm layer of peripheral fat along one edge 7 Thyroid Thyroid 0002046 177 1071 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV31-0726-SM-3GAEG 0 B1 2 ~9x8mm aliquots, one with ~1.5mm layer of peripheral fat along one edge 7 Thyroid Thyroid 0002046 177 1071 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.881817 347796 0.967695 0.883882 0.736669 23359 1 76 0.00212576 141 0 7.1681e+07 0.0320389 357328 8.1098e+07 5.61279e+06 23391 3.55609e+07 0 0.231026 0.883882 0.651128 7.1681e+07 0.00752441 1.58008e+07 6.68587e+06 1.57769e+07 167 1.57488e+07 9.79143e+06 0.00481878 1.59837e+07 50.3701 0.00440613 0.885946 0 49.9621 GTEX-QV31-0826-SM-4R1KR 1 B1 6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness 8.1 Colon Colon - Transverse 0001157 185 1064 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.988503 323816 0.973825 0.990299 0.817636 22362 1 76 0.00241621 160 0 6.02266e+07 0.0250458 788500 6.08166e+07 3.55602e+06 22380 2.99427e+07 0 0.15619 0.990299 0.809704 6.02266e+07 0.00317618 1.33882e+07 8.61595e+06 1.35909e+07 153 1.35562e+07 9.16637e+06 0.00279551 1.35246e+07 49.9417 0.0129652 0.992094 0 50.3757 GTEX-QV31-0826-SM-CKZNC 1 B1 6 ~7.5x3mm pieces; mucosa well-preserved, ~15-40% of thickness 8.1 Colon Colon - Transverse 0001157 185 1064 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.989034 592834 0.974541 0.991362 0.817634 24587 1 76 0.0024303 386 0 1.13571e+08 0.0243132 1.5198e+06 1.14561e+08 1.00335e+07 24622 5.64812e+07 0 0.156907 0.991362 0.810572 1.13571e+08 0.0038312 2.53254e+07 1.61802e+07 2.54435e+07 339 2.55508e+07 1.80192e+07 0.00312911 2.54476e+07 49.8989 0.0132663 0.99369 0 50.1163 GTEX-QV31-1026-SM-4R1K3 1 B1 2 ~9.5x7mm aliquots. Glands well-preserved 8.3 Prostate Prostate 0002367 200 1052 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990705 452940 0.959209 0.992652 0.743092 23639 1 76 0.00204142 120 0 5.38612e+07 0.0405488 230199 5.42599e+07 3.1719e+06 23666 2.67733e+07 0 0.216117 0.992652 0.737632 5.38612e+07 0.00285733 1.18114e+07 7.74058e+06 1.18526e+07 129 1.18538e+07 7.73253e+06 0.00244857 1.19189e+07 50.1369 0.00424252 0.994599 0 50.0871 GTEX-QV31-1026-SM-CNNOS 1 B1 2 ~9.5x7mm aliquots. Glands well-preserved 8.3 Prostate Prostate 0002367 200 1052 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.991929 647633 0.960202 0.993796 0.739091 26651 1 76 0.00252876 277 0 1.14129e+08 0.0394887 620952 1.14842e+08 1.26821e+07 26702 5.68292e+07 0 0.221111 0.993796 0.734506 1.14129e+08 0.00338426 2.50042e+07 1.71059e+07 2.52052e+07 290 2.5288e+07 1.61456e+07 0.0029557 2.51227e+07 49.836 0.00540702 0.995664 0 50.2001 GTEX-QV31-1126-SM-4R1K4 1 B1 2 7x6mm aliquots. Robust spermatogenesis 6.7 Testis Testis 0000473 206 1047 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990749 288667 0.923377 0.992388 0.732946 31678 1 76 0.00201414 128 0 5.56423e+07 0.07632 594898 5.60691e+07 3.23016e+06 31723 2.77045e+07 0 0.190431 0.992388 0.727367 5.56423e+07 0.00259468 1.15046e+07 8.03877e+06 1.15754e+07 118 1.15939e+07 8.8355e+06 0.00230393 1.157e+07 49.9483 0.0106101 0.994027 0 50.1534 GTEX-QV31-1126-SM-CKZNA 1 B1 2 7x6mm aliquots. Robust spermatogenesis 6.7 Testis Testis 0000473 206 1047 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-9108 07/07/2016 TruSeq.v1 RNASEQ 0.986081 690368 0.923989 0.988293 0.731756 34805 1 76 0.00209976 292 0 1.07817e+08 0.075689 1.20198e+06 1.09094e+08 9.6136e+06 34877 5.36645e+07 0 0.192233 0.988293 0.72319 1.07817e+08 0.00351544 2.22927e+07 1.60567e+07 2.23861e+07 274 2.25455e+07 1.76184e+07 0.00280601 2.23367e+07 49.7674 0.0110178 0.990505 0 50.1045 GTEX-QV31-1326-SM-2S1QE 0 B1 2 ~14x10mm aliquots, centrally under-fixed with tears/holes 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 225 1032 BP-20786 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.896845 202329 0.973591 0.899443 0.799316 22989 1 76 0.00215628 165 0 7.91752e+07 0.0261283 492203 8.80269e+07 1.15371e+07 23020 3.9271e+07 0 0.174275 0.899443 0.71894 7.91752e+07 0.00829651 1.73417e+07 7.23491e+06 1.75271e+07 166 1.7587e+07 1.30728e+07 0.00521752 1.7482e+07 49.8504 0.00559151 0.902042 0 50.2658 GTEX-QV31-1426-SM-2S1QD 0 B1 2 ~11x8mm aliquots, minimal (<5%) interstitial fat 8 Muscle Muscle - Skeletal 0011907 226 1032 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.717508 119134 0.981467 0.721148 0.881235 18403 1 76 0.002104 89 0 4.31909e+07 0.0183262 771559 5.98919e+07 6.91596e+06 18406 2.13735e+07 0 0.100232 0.721148 0.635501 4.31909e+07 0.00844169 9.18681e+06 4.44444e+06 9.3845e+06 97 9.42548e+06 8.21649e+06 0.00525685 9.32239e+06 49.725 0.0128825 0.724788 0 50.5323 GTEX-QV31-1426-SM-2TO6Z 0 B1 2 ~11x8mm aliquots, minimal (<5%) interstitial fat 8 Muscle Muscle - Skeletal 0011907 226 1032 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV31-1526-SM-2S1QB 0 B1 2 ~4.5x3mm aliquots, good clean specimens 6.5 Nerve Nerve - Tibial 0001323 231 1028 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.233362 20935 0.961086 0.23731 0.761187 17571 1 76 0.0026661 103 0 8.10158e+06 0.0386694 45864 3.41392e+07 7.00318e+06 17573 3.89935e+06 0 0.199899 0.23731 0.180638 8.10158e+06 0.0111267 1.73344e+06 1.04766e+06 1.75352e+06 102 1.81235e+06 1.20028e+06 0.006826 1.79762e+06 49.7961 0.00134344 0.241259 0 50.288 GTEX-QV31-1526-SM-2TO58 0 B1 2 ~4.5x3mm aliquots, good clean specimens 6.5 Nerve Nerve - Tibial 0001323 231 1028 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV31-1626-SM-2S1QC 0 B1 2 ~3mm d aliquots, one with extra 2mm artery segment attached. Good clean specimen 7.6 Blood Vessel Artery - Tibial 0007610 234 1026 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.839858 71153 0.972476 0.844333 0.816446 19670 1 76 0.00225112 91 0 3.87754e+07 0.0272285 145376 4.59243e+07 5.37809e+06 19677 1.91795e+07 0 0.15603 0.844333 0.689352 3.87754e+07 0.00871358 8.28819e+06 3.00187e+06 8.36912e+06 101 8.44790e+06 7.11415e+06 0.00546523 8.39572e+06 49.8451 0.00316556 0.848808 0 50.2429 GTEX-QV31-1626-SM-2TO5A 0 B1 2 ~3mm d aliquots, one with extra 2mm artery segment attached. Good clean specimen 7.6 Blood Vessel Artery - Tibial 0007610 234 1026 BP-20787 RNA isolation_PAXgene Tissue miRNA 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-0003-SM-2MRI4 B1 Blood Whole Blood 0013756 -50 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321106_R02C01 GTEX-QV44-0003-SM-2XK2A B1 Blood Whole Blood 0013756 -50 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R05C01 GTEX-QV44-0003-SM-4SVQB B1 Blood Whole Blood 0013756 -50 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-QV44-0003-SM-5SOEM B1 Blood Whole Blood 0013756 -50 BP-20754 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/12/2011 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QV44-0006-SM-2S1Q7 B1 9.3 Blood Whole Blood 0013756 -50 BP-20770 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2011 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.567416 410446 0.934898 0.572779 0.786812 19797 1 76 0.00224484 87 0 3.06191e+07 0.0646859 127665 5.3457e+07 7.31957e+06 19799 1.50779e+07 0 0.148087 0.572779 0.45067 3.06191e+07 0.00919854 6.6151e+06 3.1091e+07 6.77782e+06 99 6.91598e+06 6.61413e+06 0.00568913 6.74844e+06 49.3869 0.00238818 0.578143 0 50.6075 GTEX-QV44-0006-SM-2TO6Q B1 9.3 Blood Whole Blood 0013756 -50 BP-20770 RNA isolation_PAXgene Blood RNA (Manual) 12/13/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-0008-SM-447AX B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 196 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990735 299344 0.974758 0.993132 0.829988 20618 1 76 0.0017155 158 0 6.47705e+07 0.024874 186124 6.52184e+07 3.23723e+06 20638 3.22389e+07 0 0.14477 0.993132 0.824287 6.47705e+07 0.00226573 1.44065e+07 7.8129e+06 1.44984e+07 146 1.45737e+07 1.42413e+07 0.00198995 1.44786e+07 49.8363 0.00285386 0.995529 0 50.1591 GTEX-QV44-0126-SM-4R1KH 1 B1 2 pieces both 6.5x7 mm; little congestion 7.4 Spleen Spleen 0002106 75 1075 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.982951 374299 0.959484 0.98479 0.780482 22532 1 76 0.00413014 117 0 5.56464e+07 0.0341806 287042 5.65058e+07 3.2116e+06 22546 2.74582e+07 0 0.179001 0.98479 0.768611 5.56464e+07 0.0050229 1.23988e+07 1.66672e+07 1.23661e+07 129 1.24473e+07 7.93046e+06 0.00457569 1.24274e+07 49.96 0.00507987 0.986629 0 49.9341 GTEX-QV44-0126-SM-CJI1X 1 B1 2 pieces both 6.5x7 mm; little congestion 7.4 Spleen Spleen 0002106 75 1075 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.984385 703077 0.963865 0.985571 0.79628 24376 1 76 0.00431086 272 0 1.06496e+08 0.0289645 634582 1.08055e+08 6.25382e+06 24409 5.25996e+07 0 0.167585 0.985571 0.784791 1.06496e+08 0.00502049 2.37975e+07 3.36289e+07 2.39497e+07 296 2.41522e+07 1.58887e+07 0.00466525 2.3716e+07 49.5444 0.00587276 0.986756 0 50.1593 GTEX-QV44-0326-SM-4R1KD 1 B1 2 pieces 10x7&8x6.7 mm; good preservation, no lesions 8.5 Liver Liver 0001114 83 1067 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991464 253326 0.980041 0.993702 0.853571 19967 1 76 0.00183046 108 0 5.63348e+07 0.0195092 515563 5.66919e+07 3.30811e+06 19976 2.80361e+07 0 0.126469 0.993702 0.848195 5.63348e+07 0.00244399 1.21317e+07 7.87851e+06 1.21593e+07 126 1.21893e+07 1.26495e+07 0.00213654 1.22227e+07 50.0685 0.00909413 0.995939 0 50.0568 GTEX-QV44-0326-SM-C1YQX 1 B1 2 pieces 10x7&8x6.7 mm; good preservation, no lesions 8.5 Liver Liver 0001114 83 1067 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-9105 05/16/2016 TruSeq.v1 RNASEQ 0.99032 674653 0.98043 0.992788 0.855163 21845 1 76 0.00182181 269 0 1.08926e+08 0.0192292 1.15243e+06 1.09717e+08 4.68925e+06 21865 5.42061e+07 0 0.125268 0.992788 0.848995 1.08926e+08 0.00224895 2.33946e+07 1.64263e+07 2.35131e+07 299 2.35952e+07 2.5207e+07 0.00203485 2.35439e+07 49.9456 0.0105037 0.995256 0 50.1263 GTEX-QV44-0426-SM-4R1KF 1 B1 2 pieces 9.7x7 & 8.5x8.3 mm; good preservation; islets ~250 um; ~10% adipose 7.5 Pancreas Pancreas 0001150 88 1062 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.991376 308812 0.97335 0.993489 0.831321 20547 1 76 0.00195311 95 0 5.54457e+07 0.0264626 182657 5.58091e+07 3.25787e+06 20555 2.76006e+07 0 0.14203 0.993489 0.825908 5.54457e+07 0.00264848 1.2721e+07 1.93225e+07 1.28479e+07 107 1.28286e+07 1.55972e+07 0.00230005 1.28593e+07 50.0598 0.00327289 0.995602 0 50.2482 GTEX-QV44-0526-SM-2S1RE 1 B1 2 pieces 8x6.8 mm; early ischemic changes; <5% embedded fat 8.1 Heart Heart - Left Ventricle 0006566 104 1046 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.896293 135075 0.976691 0.898622 0.83095 21207 1 76 0.00185292 119 0 7.24362e+07 0.0230747 1.75226e+06 8.0608e+07 5.85266e+06 21231 3.59695e+07 0 0.145741 0.898622 0.74671 7.24362e+07 0.00803549 1.59237e+07 8.94474e+06 1.61496e+07 162 1.61605e+07 1.13388e+07 0.00493619 1.60436e+07 49.8186 0.021738 0.900952 0 50.3521 GTEX-QV44-0526-SM-2TO51 1 B1 2 pieces 8x6.8 mm; early ischemic changes; <5% embedded fat 8.1 Heart Heart - Left Ventricle 0006566 104 1046 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-0626-SM-4R1KJ 1 B1 6 pieces up to 8x2 mm 7.2 Blood Vessel Artery - Aorta 0001496 101 1049 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.991554 218414 0.973257 0.993277 0.828581 21008 1 76 0.00180043 126 0 5.20968e+07 0.0264157 197989 5.24494e+07 2.73368e+06 21020 2.59284e+07 0 0.144676 0.993277 0.82301 5.20968e+07 0.00246892 1.12756e+07 3.89689e+06 1.13454e+07 133 1.13119e+07 9.04732e+06 0.00213409 1.14006e+07 50.1952 0.00377486 0.995 0 50.1543 GTEX-QV44-0726-SM-4R1KP 1 B1 2 arteries up to 2.8 mm; with calcified plaques and >50% occlusion 7.9 Blood Vessel Artery - Coronary 0001621 110 1040 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812,LCSET-4104 10/13/2013 TruSeq.v1 EXCLUDE 0.988252 922421 0.975109 0.990345 0.83734 22641 1 76 0.00187932 163 0 7.44734e+07 0.0244919 626756 7.51995e+07 5.89093e+06 22660 3.69484e+07 0 0.137769 0.990345 0.829255 7.44734e+07 0.00300346 1.61529e+07 7.75782e+06 1.61181e+07 179 1.63023e+07 1.41079e+07 0.0024402 1.61217e+07 49.7215 0.00833458 0.992439 0 49.9462 GTEX-QV44-0726-SM-DKPON 1 B1 2 arteries up to 2.8 mm; with calcified plaques and >50% occlusion 7.9 Blood Vessel Artery - Coronary 0001621 110 1040 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992123 452595 0.974726 0.994241 0.838437 23917 1 76 0.00256024 377 0 1.12878e+08 0.0248759 989228 1.13532e+08 1.08524e+07 23939 5.6201e+07 0 0.136289 0.994241 0.833608 1.12878e+08 0.00296453 2.43386e+07 1.01802e+07 2.46528e+07 336 2.46739e+07 2.07757e+07 0.00276196 2.45327e+07 49.8565 0.0087132 0.996358 0 50.3206 GTEX-QV44-0826-SM-2S1RG 1 B1 2 pieces 10x7&8x5 mm; no nodularity; focal fibrosis 7.1 Thyroid Thyroid 0002046 116 1034 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.889895 224639 0.951591 0.89257 0.70272 24329 1 76 0.00222639 109 0 6.58865e+07 0.0481536 452688 7.38166e+07 7.24777e+06 24377 3.26505e+07 0 0.248871 0.89257 0.627227 6.58865e+07 0.00817462 1.4169e+07 7.96886e+06 1.42293e+07 126 1.42966e+07 8.51926e+06 0.00519159 1.42734e+07 49.9594 0.0061326 0.895244 0 50.1062 GTEX-QV44-0826-SM-2TO6M 1 B1 2 pieces 10x7&8x5 mm; no nodularity; focal fibrosis 7.1 Thyroid Thyroid 0002046 116 1034 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-0926-SM-2S1RH 1 B1 6 pieces up to 8.3x3.4 mm with severe interstitial and alveolar fibrosis & severe hemorrhage 7.8 Lung Lung 0008952 124 1026 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.628794 133187 0.958251 0.637197 0.757119 20933 1 76 0.00252004 94 0 2.59502e+07 0.0413692 146482 4.07255e+07 6.72719e+06 20943 1.27259e+07 0 0.201131 0.637197 0.482434 2.59502e+07 0.0097356 5.58324e+06 6.49315e+06 5.65745e+06 101 5.80659e+06 4.10126e+06 0.00608024 5.75486e+06 49.7763 0.00359681 0.645601 0 50.3301 GTEX-QV44-0926-SM-2TO6O 1 B1 6 pieces up to 8.3x3.4 mm with severe interstitial and alveolar fibrosis & severe hemorrhage 7.8 Lung Lung 0008952 124 1026 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-1026-SM-447CG 1 B1 6 pieces 10.5x3.3 mm; moderate tissue tears 7.7 Esophagus Esophagus - Muscularis 0004648 140 1010 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.988489 244980 0.973794 0.991065 0.835808 21831 1 76 0.00177197 163 0 6.81188e+07 0.0259434 467524 6.8733e+07 3.55224e+06 21841 3.38752e+07 0 0.137985 0.991065 0.82834 6.81188e+07 0.00247498 1.46723e+07 6.34564e+06 1.47359e+07 172 1.47582e+07 1.18682e+07 0.00212256 1.48146e+07 50.0953 0.00680203 0.99364 0 50.1081 GTEX-QV44-1126-SM-4R1KO 1 B1 6 pieces up to 8.3x2.3 moderate tissue tears 9.5 Esophagus Esophagus - Mucosa 0006920 143 1007 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.992242 375469 0.974554 0.993648 0.824791 21731 1 76 0.00184706 149 0 6.72178e+07 0.0249833 393525 6.76475e+07 3.60042e+06 21744 3.34497e+07 0 0.149763 0.993648 0.819551 6.72178e+07 0.0025423 1.50655e+07 8.97738e+06 1.50614e+07 157 1.5053e+07 1.35897e+07 0.00219419 1.51723e+07 50.1974 0.00581728 0.995053 0 49.9932 GTEX-QV44-1126-SM-CL55C 1 B1 6 pieces up to 8.3x2.3 moderate tissue tears 9.5 Esophagus Esophagus - Mucosa 0006920 143 1007 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-9114 07/13/2016 TruSeq.v1 RNASEQ 0.993152 479442 0.974232 0.994475 0.824355 23333 1 76 0.00256955 284 0 1.08157e+08 0.0252805 651960 1.08758e+08 1.38129e+07 23354 5.38893e+07 0 0.149877 0.994475 0.8198 1.08157e+08 0.00360072 2.41284e+07 1.67102e+07 2.43291e+07 314 2.43629e+07 2.23226e+07 0.00308445 2.42332e+07 49.8665 0.00599459 0.995798 0 50.2071 GTEX-QV44-1226-SM-447CJ 1 B1 6 pieces up to 9.7x3.4 mm; excellent fundic mucosa 7.2 Stomach Stomach 0000945 143 1007 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-2912 TruSeq.v1 EXCLUDE 0.991391 281504 0.97529 0.993423 0.832749 21265 1 76 0.00197364 94 0 6.87507e+07 0.0244532 200346 6.92058e+07 3.52322e+06 21283 3.4229e+07 0 0.142541 0.993423 0.827272 6.87507e+07 0.00257681 1.57886e+07 2.31369e+07 1.59714e+07 112 1.59864e+07 1.94372e+07 0.00227461 1.59146e+07 49.8875 0.00289493 0.995456 0 50.2878 GTEX-QV44-1226-SM-4R1KE 1 B1 6 pieces up to 9.7x3.4 mm; excellent fundic mucosa 7.2 Stomach Stomach 0000945 143 1007 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.983435 123930 0.985872 0.985385 0.869524 20412 1 76 0.00166144 305 0 5.81644e+07 0.013555 462725 5.9027e+07 3.40636e+06 20419 2.89452e+07 0 0.116349 0.985385 0.856816 5.81644e+07 0.00229249 1.34948e+07 8.39131e+07 1.39067e+07 191 1.39229e+07 1.74355e+07 0.00197634 1.35939e+07 49.4023 0.00783921 0.987336 0 50.7516 GTEX-QV44-1226-SM-CJI1S 1 B1 6 pieces up to 9.7x3.4 mm; excellent fundic mucosa 7.2 Stomach Stomach 0000945 143 1007 BP-20868 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-9107 07/06/2016 TruSeq.v1 RNASEQ 0.981108 456904 0.984584 0.982669 0.854322 21605 1 76 0.00182406 370 0 7.99396e+07 0.0151207 766061 8.13495e+07 5.1897e+06 21616 3.97306e+07 0 0.130262 0.982669 0.839515 7.99396e+07 0.00228009 1.85573e+07 1.10915e+08 1.88772e+07 255 1.89853e+07 2.34072e+07 0.00205171 1.85694e+07 49.4463 0.00941691 0.98423 0 50.4274 GTEX-QV44-1526-SM-4R1KI 1 B1 2 pieces 12x8&8x7 mm; hyperplasia and atrophy 5.8 Prostate Prostate 0002367 163 987 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.989103 263671 0.963777 0.991501 0.781773 23972 1 76 0.00192493 137 0 6.02523e+07 0.0360078 545446 6.07688e+07 3.703e+06 23996 2.99566e+07 0 0.182004 0.991501 0.775128 6.02523e+07 0.0027529 1.31164e+07 7.05652e+06 1.32514e+07 154 1.323e+07 8.27666e+06 0.00233791 1.32808e+07 50.0958 0.00897576 0.993899 0 50.256 GTEX-QV44-1526-SM-DHXIP 1 B1 2 pieces 12x8&8x7 mm; hyperplasia and atrophy 5.8 Prostate Prostate 0002367 163 987 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-10303 01/14/2017 TruSeq.v1 RNASEQ 0.992366 389983 0.965833 0.993373 0.78863 24663 1 76 0.00230143 160 0 7.7164e+07 0.0339396 702576 7.76788e+07 4.56698e+06 24693 3.84453e+07 0 0.177202 0.993373 0.783404 7.7164e+07 0.00254282 1.67567e+07 8.63316e+06 1.71155e+07 193 1.70518e+07 1.14059e+07 0.00242201 1.68957e+07 49.7701 0.00904463 0.994379 0 50.5296 GTEX-QV44-1726-SM-4R1KG 1 B1 2 pieces 12x5&12x8 mm; reduced spermatogenesis 7.3 Testis Testis 0000473 179 971 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-3812 09/05/2013 TruSeq.v1 RNASEQ 0.990321 417075 0.936877 0.992363 0.753144 31571 1 76 0.00188771 144 0 6.82225e+07 0.0628384 1.19257e+06 6.87475e+07 3.92843e+06 31617 3.39521e+07 0 0.183733 0.992363 0.747392 6.82225e+07 0.00253654 1.44611e+07 1.06248e+07 1.44843e+07 151 1.45171e+07 1.09423e+07 0.00221146 1.45623e+07 50.0778 0.0173471 0.994405 0 50.0402 GTEX-QV44-1825-SM-447CF 1 B1 2 pieces 14x11 & 13x13 mm; large central holes; only outer 1-2 mm rim appears fixed; should have been labeled 1825 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 192 958 BP-20865 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.98997 281466 0.973594 0.991839 0.798203 22962 1 76 0.00191904 143 0 6.67155e+07 0.0260965 342934 6.72645e+07 3.33481e+06 22985 3.31875e+07 0 0.17539 0.991839 0.791689 6.67155e+07 0.00252821 1.4687e+07 6.5372e+06 1.47321e+07 159 1.47849e+07 1.11494e+07 0.00222305 1.47569e+07 49.9525 0.00509829 0.993708 0 50.0766 GTEX-QV44-1926-SM-2S1RF 1 B1 6 pieces up to 9x3 mm; moderate tissue tears 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 196 954 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.863387 76962 0.968053 0.867012 0.808662 22897 1 76 0.00218348 118 0 5.31475e+07 0.0317713 380182 6.12996e+07 9.14182e+06 22921 2.63463e+07 0 0.159391 0.867012 0.70112 5.31475e+07 0.00839705 1.15129e+07 5.87898e+06 1.16447e+07 117 1.16912e+07 8.49052e+06 0.00527728 1.16622e+07 49.9379 0.00620203 0.870637 0 50.2847 GTEX-QV44-1926-SM-2TO4T 1 B1 6 pieces up to 9x3 mm; moderate tissue tears 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 196 954 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-2026-SM-2S1RD 1 B1 2 pieces 12x8&9x9 mm; 10% adipose in 1; severe tissue tears 8.9 Muscle Muscle - Skeletal 0011907 199 951 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.969652 196944 0.97582 0.971182 0.861212 20546 1 76 0.00170561 209 0 8.93291e+07 0.0239103 1.02479e+06 9.19798e+07 6.23350e+06 20555 4.4422e+07 0 0.114609 0.971182 0.836393 8.93291e+07 0.00757075 1.87477e+07 1.228e+07 1.90254e+07 237 1.9018e+07 1.75326e+07 0.00463356 1.88566e+07 49.7869 0.0111415 0.972711 0 50.3676 GTEX-QV44-2026-SM-2TO57 1 B1 2 pieces 12x8&9x9 mm; 10% adipose in 1; severe tissue tears 8.9 Muscle Muscle - Skeletal 0011907 199 951 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QV44-2226-SM-447A3 1 B1 2 arteries ~4 mm and 2 veins; minimal intimal thickening 7.7 Blood Vessel Artery - Tibial 0007610 210 940 BP-20869 RNA isolation_PAXgene Tissue miRNA 12/15/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990167 201875 0.972736 0.992143 0.809534 20560 1 76 0.00185483 118 0 5.35683e+07 0.0268712 238257 5.39925e+07 2.46555e+06 20575 2.66444e+07 0 0.163202 0.992143 0.803173 5.35683e+07 0.00243445 1.15041e+07 4.54377e+06 1.15591e+07 125 1.1578e+07 9.6761e+06 0.00214407 1.15897e+07 50.0254 0.00441278 0.994119 0 50.1193 GTEX-QVJO-0002-SM-2MRI6 D1 Blood Whole Blood 0013756 1211 BP-20947 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321106_R03C01 GTEX-QVJO-0002-SM-2XK1B D1 Blood Whole Blood 0013756 1211 BP-20947 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R06C01 GTEX-QVJO-0002-SM-3USRR D1 Blood Whole Blood 0013756 1211 BP-20947 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2011 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-QVJO-0002-SM-5URD6 D1 Blood Whole Blood 0013756 1211 BP-20947 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/19/2011 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QVJO-0006-SM-2S1RC D1 7.1 Blood Whole Blood 0013756 1211 BP-20990 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.67275 602099 0.936607 0.674247 0.757652 17543 1 76 0.00232521 73 0 5.38088e+07 0.0625354 324275 7.98059e+07 8.63686e+06 17546 2.67012e+07 0 0.178955 0.674247 0.510844 5.38088e+07 0.00907417 1.19903e+07 8.85205e+07 1.23798e+07 97 1.24197e+07 1.2748e+07 0.0056922 1.20744e+07 49.2952 0.0040633 0.675744 0 50.7991 GTEX-QVJO-0006-SM-2TO6V D1 7.1 Blood Whole Blood 0013756 1211 BP-20990 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0008-SM-447AU D1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 1222 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.991857 283511 0.974655 0.994035 0.838933 19840 1 76 0.00171262 132 0 5.63823e+07 0.0249579 166140 5.67206e+07 2.6662e+06 19855 2.80681e+07 0 0.135722 0.994035 0.833929 5.63823e+07 0.00223045 1.25546e+07 6.66441e+06 1.26543e+07 130 1.27187e+07 1.21512e+07 0.00197097 1.26065e+07 49.7786 0.00292909 0.996214 0 50.1978 GTEX-QVJO-0011-R10A-SM-2S1QJ D1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.658167 171884 0.952072 0.661421 0.814851 22467 1 76 0.0021661 93 0 4.51207e+07 0.0473236 1.06176e+06 6.82178e+07 6.48994e+06 22478 2.23091e+07 0 0.137221 0.661421 0.538959 4.51207e+07 0.00863318 9.71507e+06 8.44247e+06 9.85877e+06 104 9.93047e+06 6.3822e+06 0.00538373 9.83432e+06 49.7567 0.0155643 0.664675 0 50.3671 GTEX-QVJO-0011-R10A-SM-2TO6Y D1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R1A-SM-2S1QI D1, A1 7.6 Brain Brain - Hippocampus 0001954 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.451584 441952 0.924075 0.451651 0.780386 22220 1 76 0.00219548 88 0 3.87783e+07 0.0754744 1.79316e+06 8.5859e+07 8.21472e+06 22232 1.9162e+07 0 0.143689 0.451651 0.352462 3.87783e+07 0.00885413 8.1297e+06 2.07793e+07 8.3759e+06 95 8.35201e+06 4.70769e+06 0.00552431 8.14356e+06 49.3682 0.0208849 0.451718 0 50.7458 GTEX-QVJO-0011-R1A-SM-2TO64 D1, A1 7.6 Brain Brain - Hippocampus 0001954 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R2A-SM-2S1QK D1, A1 7.1 Brain Brain - Substantia nigra 0002038 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.922704 416266 0.942902 0.924937 0.824751 22835 1 76 0.00214197 123 0 6.11298e+07 0.0566782 3.29369e+06 6.60908e+07 5.65775e+06 22853 3.03461e+07 0 0.118151 0.924937 0.762843 6.11298e+07 0.00817497 1.30527e+07 2.21298e+07 1.34205e+07 145 1.34332e+07 7.42574e+06 0.00515119 1.31549e+07 49.4766 0.0498358 0.92717 0 50.6946 GTEX-QVJO-0011-R2A-SM-2TO61 D1, A1 7.1 Brain Brain - Substantia nigra 0002038 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R4A-SM-2S1QL D1, A1 7.7 Brain Brain - Amygdala 0001876 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.923376 368048 0.953559 0.925465 0.826208 24702 1 76 0.00214492 270 0 8.7741e+07 0.0459678 3.89301e+06 9.48075e+07 7.70374e+06 24727 4.35599e+07 0 0.127352 0.925465 0.764626 8.7741e+07 0.00820494 1.89179e+07 1.95757e+07 1.93644e+07 275 1.93941e+07 1.13543e+07 0.00516809 1.90364e+07 49.5347 0.0410622 0.927554 0 50.5831 GTEX-QVJO-0011-R4A-SM-2TO67 D1, A1 7.7 Brain Brain - Amygdala 0001876 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R5A-SM-2S1QM D1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.911298 391979 0.943067 0.914336 0.798965 24279 1 76 0.00217923 153 0 7.311e+07 0.0564978 2.71579e+06 7.99596e+07 6.65292e+06 24304 3.62538e+07 0 0.144102 0.914336 0.730523 7.311e+07 0.00829858 1.55696e+07 2.09142e+07 1.58824e+07 166 1.59456e+07 9.28923e+06 0.00522873 1.57021e+07 49.6153 0.0339646 0.917375 0 50.4973 GTEX-QVJO-0011-R5A-SM-2TO63 D1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R6A-SM-2S1QN D1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.939111 242582 0.95244 0.941109 0.806157 24820 1 76 0.00217599 156 0 7.91106e+07 0.0469575 2.23456e+06 8.40611e+07 6.86267e+06 24848 3.92725e+07 0 0.146284 0.941109 0.758681 7.91106e+07 0.00823694 1.71275e+07 1.18679e+07 1.72865e+07 182 1.73461e+07 1.17434e+07 0.00520003 1.72064e+07 49.7979 0.0265825 0.943107 0 50.2311 GTEX-QVJO-0011-R6A-SM-2TO5X D1, A1 7.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R7A-SM-2S1QO D1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.207391 49676 0.943991 0.208413 0.80652 18295 1 76 0.00224371 89 0 1.07102e+07 0.0555067 383221 5.13892e+07 4.91576e+06 18299 5.21991e+06 0 0.137471 0.208413 0.168089 1.07102e+07 0.01008 2.27314e+06 2.78956e+06 2.33854e+06 99 2.35783e+06 1.41758e+06 0.00614266 2.29953e+06 49.3741 0.00745723 0.209434 0 50.709 GTEX-QVJO-0011-R7A-SM-2TO6W D1, A1 7.6 Brain Brain - Putamen (basal ganglia) 0001874 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0011-R8A-SM-447C7 D1, A1 5.9 Brain Brain - Hypothalamus 0001898 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.988569 367382 0.962508 0.991813 0.847223 23422 1 76 0.0018762 163 0 6.62784e+07 0.0371485 2.84480e+06 6.68255e+07 3.43899e+06 23436 3.29413e+07 0 0.115285 0.991813 0.840287 6.62784e+07 0.00258025 1.45684e+07 1.16038e+07 1.46712e+07 200 1.47086e+07 8.76637e+06 0.00222707 1.4735e+07 50.0449 0.0425707 0.995056 0 50.1758 GTEX-QVJO-0011-R9A-SM-2S1QH D1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.936524 834480 0.918565 0.93898 0.762885 24856 1 76 0.00224594 168 0 7.59635e+07 0.0809963 2.68865e+06 8.09e+07 6.89782e+06 24886 3.76959e+07 0 0.15568 0.93898 0.716334 7.59635e+07 0.00826472 1.58219e+07 4.05767e+07 1.62729e+07 167 1.62999e+07 9.24564e+06 0.00524746 1.59611e+07 49.4749 0.0332342 0.941436 0 50.7025 GTEX-QVJO-0011-R9A-SM-2TO5M D1, A1 7.9 Brain Brain - Spinal cord (cervical c-1) 0006469 1201 BP-21964 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0126-SM-2TO62 1 D1 2 ~12x7mm aliquots, good clean specimens, <5% interstitial fat 8.7 Muscle Muscle - Skeletal 0011907 1220 1047 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0126-SM-3GIK4 1 D1 2 ~12x7mm aliquots, good clean specimens, <5% interstitial fat 8.7 Muscle Muscle - Skeletal 0011907 1220 1047 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.683861 183316 0.974 0.686257 0.824218 19593 1 76 0.00230824 137 0 4.1037e+07 0.0257695 351018 5.97982e+07 5.65829e+06 19603 2.03178e+07 0 0.149782 0.686257 0.565626 4.1037e+07 0.00734832 8.88774e+06 3.99996e+06 8.84721e+06 153 8.87979e+06 7.09007e+06 0.00481948 8.98096e+06 50.2832 0.00587004 0.688654 0 49.8857 GTEX-QVJO-0226-SM-2S1R2 1 D1 2 ~8x7mm aliquots, extreme separation falsely implies larger dimensions 7 Adipose Tissue Adipose - Subcutaneous 0002190 1225 1042 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.262659 19227 0.966869 0.271813 0.790152 16940 1 76 0.00266357 99 0 8.03722e+06 0.0328205 52847 2.9569e+07 5.13261e+06 16942 3.82924e+06 0 0.176717 0.271813 0.214774 8.03722e+06 0.0120821 1.69232e+06 1.31688e+06 1.72489e+06 99 1.84963e+06 1.31635e+06 0.00721426 1.81627e+06 49.545 0.00178725 0.280967 0 50.4767 GTEX-QVJO-0226-SM-2TO4P 1 D1 2 ~8x7mm aliquots, extreme separation falsely implies larger dimensions 7 Adipose Tissue Adipose - Subcutaneous 0002190 1225 1042 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0326-SM-2S1R1 1 D1 2 ~5x3mm aliquots; good clean specimens 6.6 Nerve Nerve - Tibial 0001323 1229 1038 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.22702 55977 0.960527 0.225261 0.739321 20770 1 76 0.00230299 97 0 2.4345e+07 0.0390572 136162 1.08075e+08 8.88171e+06 20779 1.19329e+07 0 0.221206 0.225261 0.16654 2.4345e+07 0.00970659 5.33332e+06 3.54541e+06 5.41023e+06 97 5.31633e+06 3.59735e+06 0.00603371 5.24448e+06 49.6598 0.00125989 0.223501 0 50.3579 GTEX-QVJO-0326-SM-2TO5B 1 D1 2 ~5x3mm aliquots; good clean specimens 6.6 Nerve Nerve - Tibial 0001323 1229 1038 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-0526-SM-447CE 1 D1 6 ~8.5x1.5mm pieces, some with 0.5-1mm attached fibroadipose tissue on serosal surfaces 6.1 Blood Vessel Artery - Aorta 0001496 1238 1029 BP-20980 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-2912,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.974953 155898 0.969195 0.976914 0.788858 21207 1 76 0.00218001 121 0 5.7026e+07 0.0304032 106377 5.83736e+07 2.6402e+06 21223 2.83274e+07 0 0.180338 0.976914 0.770646 5.7026e+07 0.00290174 1.22938e+07 6.0497e+06 1.23357e+07 132 1.23893e+07 9.54527e+06 0.00254015 1.23542e+07 49.929 0.00182235 0.978875 0 50.0851 GTEX-QVJO-1226-SM-4R1KA 2 D1 10x5mm aliquot with 3.5x2mm portion of neuohypophysis appended 6.6 Pituitary Pituitary 0000007 1276 998 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-3812,LCSET-4325 11/02/2013 TruSeq.v1 RNASEQ 0.991834 443134 0.963607 0.993333 0.767611 25495 1 76 0.00202745 169 0 8.11152e+07 0.0361072 789502 8.16596e+07 5.45632e+06 25537 4.03694e+07 0 0.195996 0.993333 0.762494 8.11152e+07 0.00286309 1.75513e+07 9.36529e+06 1.76341e+07 196 1.7604e+07 1.23846e+07 0.00244464 1.77064e+07 50.1449 0.0096682 0.994832 0 50.1177 GTEX-QVJO-1325-SM-2S1QX 2 D1 4 ~6x5mm aliquots 7.3 Brain Brain - Cerebellum 0002037 1276 998 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.853898 166221 0.94097 0.856199 0.703214 23339 1 76 0.00245973 93 0 5.86659e+07 0.0586566 869174 6.8519e+07 6.22902e+06 23366 2.90962e+07 0 0.237755 0.856199 0.602092 5.86659e+07 0.00852017 1.25756e+07 8.5995e+06 1.26752e+07 113 1.27357e+07 6.95648e+06 0.0054818 1.26513e+07 49.8339 0.0126852 0.858501 0 50.1972 GTEX-QVJO-1325-SM-2TO6N 2 D1 4 ~6x5mm aliquots 7.3 Brain Brain - Cerebellum 0002037 1276 998 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-1426-SM-2S1QY 2 D1 3 ~7x3 mm aliquots; 1 ~4x1.5mm aliquot; 1 ~3.5x3.5mm fragment of dura 6.9 Brain Brain - Cortex 0001870 1279 995 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.764525 154040 0.96178 0.767576 0.842375 22145 1 76 0.00217181 91 0 4.76664e+07 0.0378302 1.78028e+06 6.20999e+07 5.15084e+06 22157 2.36232e+07 0 0.119405 0.767576 0.646587 4.76664e+07 0.00865353 1.03662e+07 7.93438e+06 1.05773e+07 114 1.06242e+07 6.11138e+06 0.00539979 1.04713e+07 49.6376 0.028668 0.770626 0 50.504 GTEX-QVJO-1426-SM-2TO5V 2 D1 3 ~7x3 mm aliquots; 1 ~4x1.5mm aliquot; 1 ~3.5x3.5mm fragment of dura 6.9 Brain Brain - Cortex 0001870 1279 995 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-1626-SM-2S1QW 1 D1 6 ~9x1.5mm pieces. Squamous epithelium is ~2-3% of thickness 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1222 1052 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.480076 64042 0.966702 0.482301 0.788308 21236 1 76 0.00231066 107 0 3.54117e+07 0.0330726 251142 7.34224e+07 7.25338e+06 21249 1.75051e+07 0 0.178395 0.482301 0.380202 3.54117e+07 0.00892645 7.65246e+06 4.65517e+06 7.77021e+06 98 7.82029e+06 5.254e+06 0.0056033 7.74529e+06 49.7591 0.00342051 0.484526 0 50.3817 GTEX-QVJO-1626-SM-2TO5E 1 D1 6 ~9x1.5mm pieces. Squamous epithelium is ~2-3% of thickness 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1222 1052 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-1726-SM-2S1R3 1 D1 2 ~5mm d aliquots-good clean specimens 6.4 Blood Vessel Artery - Tibial 0007610 1227 1047 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 EXCLUDE 0.154382 24737 0.964786 0.151546 0.779155 17104 1 76 0.00230549 93 0 1.17972e+07 0.0349136 57640 7.78462e+07 8.61095e+06 17106 5.67043e+06 0 0.185631 0.151546 0.118077 1.17972e+07 0.0116784 2.56326e+06 1.50214e+06 2.59028e+06 98 2.47576e+06 1.96995e+06 0.00707964 2.46655e+06 49.9068 0.000740434 0.148709 0 50.2622 GTEX-QVJO-1726-SM-2TO4L 1 D1 2 ~5mm d aliquots-good clean specimens 6.4 Blood Vessel Artery - Tibial 0007610 1227 1047 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-1826-SM-447C9 1 D1 2 11x9mm aliquots. Atrophic mammary ductal and lobular elements noted. 5.9 Breast Breast - Mammary Tissue 0008367 1234 1040 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.987143 187683 0.976191 0.989684 0.78773 22311 1 76 0.00205372 121 0 5.58239e+07 0.0235131 234365 5.64057e+07 2.8628e+06 22331 2.77471e+07 0 0.188461 0.989684 0.779605 5.58239e+07 0.00286298 1.23273e+07 6.31164e+06 1.23583e+07 137 1.24093e+07 8.57713e+06 0.00245731 1.24147e+07 50.011 0.00415498 0.992226 0 50.0629 GTEX-QVJO-1926-SM-2S1QZ 1 D1 2 ~10x10mm aliquots, one ~25% attached adipose pericardial fat (10x5mm) 6.6 Heart Heart - Left Ventricle 0006566 1249 1029 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-1466 05/21/2012 TruSeq.v1 RNASEQ 0.403395 52151 0.969776 0.409523 0.859028 15994 1 76 0.00219996 71 0 1.30953e+07 0.030134 796390 3.19769e+07 4.36412e+06 15995 6.4161e+06 0 0.110747 0.409523 0.351792 1.30953e+07 0.00940747 2.81937e+06 3.21286e+06 2.98773e+06 97 3.06952e+06 714786 0.00574979 2.91101e+06 48.6748 0.0249052 0.415652 0 51.4496 GTEX-QVJO-1926-SM-2TO5L 1 D1 2 ~10x10mm aliquots, one ~25% attached adipose pericardial fat (10x5mm) 6.6 Heart Heart - Left Ventricle 0006566 1249 1029 BP-20981 RNA isolation_PAXgene Tissue miRNA 12/20/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QVJO-2526-SM-4R1KB 1 D1 6 ~9x4.5mm pieces. Squamous mucosa is ~3-5% of thickness 6.8 Vagina Vagina 0000996 1283 999 BP-20982 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.990691 198473 0.976773 0.991976 0.756218 22380 1 76 0.0021207 130 0 5.79782e+07 0.0229496 330349 5.84472e+07 3.39443e+06 22399 2.88483e+07 0 0.220555 0.991976 0.75015 5.79782e+07 0.00288263 1.3017e+07 7.62136e+06 1.3023e+07 134 1.30129e+07 9.78215e+06 0.00250117 1.31065e+07 50.1792 0.0056521 0.993262 0 50.0116 GTEX-QVJO-2526-SM-CYPRA 1 D1 6 ~9x4.5mm pieces. Squamous mucosa is ~3-5% of thickness 6.8 Vagina Vagina 0000996 1283 999 BP-20982 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993999 187859 0.977495 0.99469 0.761241 22820 1 76 0.00240421 146 0 6.99295e+07 0.0222086 446562 7.03028e+07 5.00778e+06 22851 3.48582e+07 0 0.216254 0.99469 0.757199 6.99295e+07 0.00302069 1.56804e+07 9.36451e+06 1.57689e+07 153 1.57444e+07 1.22981e+07 0.00271223 1.57561e+07 50.0185 0.00635198 0.995381 0 50.1408 GTEX-QVJO-3126-SM-4R1KC 1 D1 2 ~10x8mm aliquots. Post menopausal atrophic cortex, corpora albicantia noted 6.3 Ovary Ovary 0000992 1287 995 BP-20982 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-3812 09/05/2013 TruSeq.v1 EXCLUDE 0.991183 227540 0.966787 0.992467 0.783316 22706 1 76 0.0019245 137 0 5.64661e+07 0.0329601 149805 5.68947e+07 3.23059e+06 22728 2.80998e+07 0 0.183471 0.992467 0.777416 5.64661e+07 0.0026348 1.23069e+07 6.93798e+06 1.23472e+07 133 1.23128e+07 1.08228e+07 0.00227919 1.24247e+07 50.2262 0.00263302 0.993752 0 50.0816 GTEX-QVJO-3126-SM-COH22 1 D1 2 ~10x8mm aliquots. Post menopausal atrophic cortex, corpora albicantia noted 6.3 Ovary Ovary 0000992 1287 995 BP-20982 RNA isolation_PAXgene Tissue miRNA 12/20/2011 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991685 340767 0.96666 0.99313 0.782115 24270 1 76 0.00338863 176 0 8.53784e+07 0.0330494 275189 8.5969e+07 8.27512e+06 24302 4.25075e+07 0 0.184545 0.99313 0.776742 8.53784e+07 0.00457981 1.8561e+07 1.11126e+07 1.86633e+07 182 1.86625e+07 1.67376e+07 0.00398335 1.86939e+07 50.042 0.00320102 0.994576 0 50.1373 GTEX-QVUS-0001-SM-2RXET D1 Blood Whole Blood 0013756 915 BP-20984 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2011 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428098_R02C01 GTEX-QVUS-0001-SM-2XK2W D1 Blood Whole Blood 0013756 915 BP-20984 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R03C01 GTEX-QVUS-0001-SM-3UZFP D1 Blood Whole Blood 0013756 915 BP-20984 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2011 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-QVUS-0001-SM-5URDT D1 Blood Whole Blood 0013756 915 BP-20984 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/20/2011 LCSET-5270,LCSET-5432 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QVUS-0006-SM-2TWBV D1 7.5 Blood Whole Blood 0013756 915 BP-20990 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0006-SM-3GAE8 D1 7.5 Blood Whole Blood 0013756 915 BP-20990 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2011 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.962227 418160 0.976638 0.964427 0.75416 18671 1 76 0.00255026 136 0 8.41795e+07 0.0208422 138270 8.72844e+07 6.44086e+06 18686 4.17065e+07 0 0.222478 0.964427 0.727333 8.41795e+07 0.00832314 1.91019e+07 5.77454e+07 1.95318e+07 155 1.94281e+07 1.74107e+07 0.00543011 1.93838e+07 49.943 0.00158413 0.966628 0 50.5565 GTEX-QVUS-0008-SM-447AY D1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 924 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.990699 377898 0.976384 0.993375 0.843932 20170 1 76 0.00175303 155 0 6.11528e+07 0.0232116 143833 6.15606e+07 3.02166e+06 20184 3.04236e+07 0 0.132452 0.993375 0.838341 6.11528e+07 0.00241375 1.36348e+07 7.03038e+06 1.37546e+07 139 1.38459e+07 1.37285e+07 0.0020825 1.36994e+07 49.7342 0.00233645 0.996051 0 50.2187 GTEX-QVUS-0011-R10A-SM-2TWCC D1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R10A-SM-3GIK3 D1, A1 7.8 Brain Brain - Frontal Cortex (BA9) 0009834 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.949281 219424 0.965624 0.952056 0.8446 24031 1 76 0.00249225 227 0 8.52536e+07 0.0340239 3.01556e+06 8.95468e+07 8.80769e+06 24053 4.23273e+07 0 0.121025 0.952056 0.804106 8.52536e+07 0.00712813 1.86402e+07 7.89325e+06 1.89672e+07 271 1.88445e+07 9.61285e+06 0.00480343 1.89847e+07 50.1854 0.0336758 0.954831 0 50.4347 GTEX-QVUS-0011-R1A-SM-2TWC2 D1, A1 7.6 Brain Brain - Hippocampus 0001954 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R1A-SM-3GAD2 D1, A1 7.6 Brain Brain - Hippocampus 0001954 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.971606 294050 0.962777 0.976215 0.812116 25485 1 76 0.00253338 170 0 8.73249e+07 0.0368416 2.28479e+06 8.94525e+07 1.19592e+07 25519 4.33184e+07 0 0.150661 0.976215 0.7928 8.73249e+07 0.00921783 1.90578e+07 1.11266e+07 1.94701e+07 215 1.95267e+07 1.19861e+07 0.00585982 1.93811e+07 49.8129 0.025542 0.980825 0 50.535 GTEX-QVUS-0011-R3A-SM-2TWCR D1, A1 7.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R3A-SM-3GAFD D1, A1 7.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.905094 222938 0.961141 0.90755 0.84501 22658 1 76 0.00213554 145 0 5.51066e+07 0.0384353 1.84674e+06 6.07201e+07 4.8438e+06 22670 2.73278e+07 0 0.116132 0.90755 0.766889 5.51066e+07 0.00779075 1.20089e+07 6.2067e+06 1.21612e+07 172 1.2116e+07 6.88701e+06 0.00495549 1.21843e+07 50.1405 0.0304139 0.910006 0 50.3151 GTEX-QVUS-0011-R4A-SM-2TWBU D1, A1 6.8 Brain Brain - Amygdala 0001876 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R4A-SM-3GAE7 D1, A1 6.8 Brain Brain - Amygdala 0001876 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.830048 153962 0.967359 0.832258 0.851292 23500 1 76 0.00219348 208 0 7.94208e+07 0.0323056 5.33175e+06 9.54281e+07 1.77177e+07 23530 3.94192e+07 0 0.116067 0.832258 0.708495 7.94208e+07 0.00799495 1.75428e+07 7.63714e+06 1.77765e+07 258 1.75128e+07 8.93012e+06 0.00508651 1.79943e+07 50.6779 0.0558719 0.834469 0 50.3308 GTEX-QVUS-0011-R6A-SM-2TWBT D1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R6A-SM-3GACX D1, A1 6.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.729539 199672 0.960026 0.737341 0.846839 22396 1 76 0.00259763 107 0 4.71209e+07 0.0396466 3.15922e+06 6.39065e+07 1.03104e+07 22410 2.32426e+07 0 0.113186 0.737341 0.624409 4.71209e+07 0.00984815 1.01333e+07 1.00667e+07 1.0462e+07 125 1.06453e+07 5.57007e+06 0.00618453 1.04296e+07 49.4883 0.049435 0.745142 0 50.7978 GTEX-QVUS-0011-R8A-SM-2TWCG D1, A1 7.6 Brain Brain - Hypothalamus 0001898 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R8A-SM-3GAD7 D1, A1 7.6 Brain Brain - Hypothalamus 0001898 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.938974 252181 0.965105 0.944241 0.85124 24514 1 76 0.00251335 165 0 7.73036e+07 0.0345023 1.64463e+06 8.18684e+07 1.21983e+07 24535 3.83195e+07 0 0.113865 0.944241 0.803776 7.73036e+07 0.00979425 1.68858e+07 9.19215e+06 1.7235e+07 198 1.73558e+07 1.10983e+07 0.00613349 1.71637e+07 49.7217 0.0200887 0.949508 0 50.5118 GTEX-QVUS-0011-R9A-SM-2TWAU D1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0011-R9A-SM-3GIJA D1, A1 6 Brain Brain - Spinal cord (cervical c-1) 0006469 923 BP-22309 RNA isolation_PAXgene Tissue miRNA 02/09/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.687202 49769 0.961662 0.690155 0.840736 21125 1 76 0.00258217 127 0 3.76332e+07 0.0380538 1.11312e+06 5.45286e+07 7.02095e+06 21138 1.86457e+07 0 0.120926 0.690155 0.580238 3.76332e+07 0.00720601 8.27635e+06 3.10525e+06 8.42596e+06 130 8.36208e+06 4.92136e+06 0.0048842 8.49722e+06 50.4008 0.0204135 0.693108 0 50.4479 GTEX-QVUS-0226-SM-2TWBX 1 D1 2 ~ 8x8mm aliquots, fragmented, one with 5x1.5mm central fatty area 6.9 Muscle Muscle - Skeletal 0011907 930 1176 BP-21018 RNA isolation_PAXgene Tissue miRNA 12/22/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-0226-SM-3GIJY 1 D1 2 ~ 8x8mm aliquots, fragmented, one with 5x1.5mm central fatty area 6.9 Muscle Muscle - Skeletal 0011907 930 1176 BP-21018 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.941736 98227 0.974393 0.944456 0.82111 20662 1 76 0.0024528 142 0 6.73213e+07 0.0254227 1.03866e+06 7.12804e+07 6.58116e+06 20682 3.3443e+07 0 0.153283 0.944456 0.775503 6.73213e+07 0.00711135 1.44167e+07 6.07534e+06 1.46015e+07 170 1.44838e+07 1.05111e+07 0.00477537 1.47038e+07 50.3768 0.0145715 0.947176 0 50.3185 GTEX-QVUS-0426-SM-48FE3 1 D1 6 ~ 8.5x1mm 10.5x8.5 pieces 6.2 Blood Vessel Artery - Aorta 0001496 945 1163 BP-21018 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.98794 302267 0.97362 0.990642 0.820198 22440 1 76 0.00215213 143 0 6.75864e+07 0.0260933 104412 6.82248e+07 6.73522e+06 22455 3.35819e+07 0 0.153422 0.990642 0.812523 6.75864e+07 0.00301267 1.46466e+07 7.40869e+06 1.4732e+07 159 1.4765e+07 1.26559e+07 0.00258122 1.47975e+07 50.0549 0.00153041 0.993343 0 50.1453 GTEX-QVUS-0626-SM-447CC 1 D1 6 ~ 5x1.5mm pieces; squamous mucosa is 10-20% of thickness 6.5 Esophagus Esophagus - Mucosa 0006920 956 1154 BP-21018 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-2912 04/12/2013 TruSeq.v1 RNASEQ 0.986235 238811 0.968247 0.988611 0.775205 21910 1 76 0.00200641 121 0 5.70359e+07 0.0315631 368461 5.76929e+07 3.01635e+06 21931 2.83563e+07 0 0.193042 0.988611 0.766376 5.70359e+07 0.00267594 1.26695e+07 7.16921e+06 1.2763e+07 136 1.28228e+07 8.68673e+06 0.00234037 1.27441e+07 49.8461 0.00638659 0.990988 0 50.1837 GTEX-QVUS-2026-SM-CYKPC 2 D1 2 ~ 10.5x8.5 aliquots. Bronchiolar mucosa largely sloughed; moderate-alveolar congestion 5.6 Lung Lung 0008952 942 1231 BP-21030 RNA isolation_PAXgene Tissue miRNA 12/22/2011 RIP-Seq GTEX-QVUS-2026-SM-EYYW9 2 D1 2 ~ 10.5x8.5 aliquots. Bronchiolar mucosa largely sloughed; moderate-alveolar congestion 5.6 Lung Lung 0008952 942 1231 BP-21030 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.977388 630811 0.97073 0.983075 0.784569 24473 1 76 0.00244028 156 0 7.4277e+07 0.0289853 225944 7.55557e+07 2.81286e+06 24499 3.67908e+07 0 0.186161 0.983075 0.77129 7.4277e+07 0.00467013 1.61403e+07 9.12005e+06 1.63207e+07 167 1.64209e+07 1.26396e+07 0.00354876 1.64475e+07 50.0405 0.00299043 0.988763 0 50.2779 GTEX-QVUS-2826-SM-2TWCH 1 D1 4 ~4x4mm aliquots 6.1 Brain Brain - Cortex 0001870 997 1181 BP-21031 RNA isolation_PAXgene Tissue miRNA 12/22/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-2826-SM-3GADB 1 D1 4 ~4x4mm aliquots 6.1 Brain Brain - Cortex 0001870 997 1181 BP-21031 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.780217 317985 0.953738 0.787287 0.810507 23799 1 76 0.00262608 121 0 6.08104e+07 0.0459678 2.22739e+06 7.72404e+07 1.27331e+07 23814 3.00358e+07 0 0.143232 0.787287 0.638101 6.08104e+07 0.00984534 1.306e+07 1.46319e+07 1.3357e+07 145 1.35414e+07 7.00578e+06 0.00620329 1.33822e+07 49.7045 0.0288371 0.794358 0 50.5623 GTEX-QVUS-2826-SM-CYKP8 1 D1 4 ~4x4mm aliquots 6.1 Brain Brain - Cortex 0001870 997 1181 BP-21031 RNA isolation_PAXgene Tissue miRNA 12/22/2011 RIP-Seq GTEX-QVUS-2926-SM-2TWDD 2 D1 4 ~5x4mm aliquots, granular layer with more autolytic changes 7.2 Brain Brain - Cerebellum 0002037 1002 1176 BP-21031 RNA isolation_PAXgene Tissue miRNA 12/22/2011 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-QVUS-2926-SM-3GIJB 2 D1 4 ~5x4mm aliquots, granular layer with more autolytic changes 7.2 Brain Brain - Cerebellum 0002037 1002 1176 BP-21031 RNA isolation_PAXgene Tissue miRNA 12/22/2011 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.953643 503087 0.935794 0.95633 0.700274 23713 1 76 0.00263653 141 0 7.04077e+07 0.0638829 1.01098e+06 7.36228e+07 5.29076e+06 23741 3.49449e+07 0 0.235519 0.95633 0.669694 7.04077e+07 0.0073351 1.49668e+07 1.58438e+07 1.51525e+07 167 1.51556e+07 7.85978e+06 0.00497921 1.51584e+07 50.0047 0.0137319 0.959018 0 50.3082 GTEX-QXCU-0004-SM-2MRI8 C1 Blood Whole Blood 0013756 836 BP-20999 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2011 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321106_R04C01 GTEX-QXCU-0004-SM-2XK33 C1 Blood Whole Blood 0013756 836 BP-20999 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2011 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R04C01 GTEX-QXCU-0004-SM-3USSG C1 Blood Whole Blood 0013756 836 BP-20999 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2011 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-QXCU-0004-SM-5URDS C1 Blood Whole Blood 0013756 836 BP-20999 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2011 LCSET-5270,LCSET-5432 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-QXCU-0006-SM-2TC5K C1 9.4 Blood Whole Blood 0013756 836 BP-21039 RNA isolation_PAXgene Blood RNA (Manual) 12/23/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.754071 527760 0.945191 0.759012 0.668973 21418 1 76 0.00339026 102 0 6.73601e+07 0.0544492 88699 8.87471e+07 1.9204e+07 21458 3.33051e+07 0 0.276218 0.759012 0.507759 6.73601e+07 0.0173462 1.4483e+07 3.05952e+07 1.46457e+07 105 1.48278e+07 1.04471e+07 0.0103228 1.47106e+07 49.8016 0.000999458 0.763952 0 50.2794 GTEX-QXCU-0006-SM-2TO4H C1 9.4 Blood Whole Blood 0013756 836 BP-21039 RNA isolation_PAXgene Blood RNA (Manual) 12/23/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0008-SM-48FCH C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1104 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992559 520714 0.980189 0.994576 0.863718 19645 1 76 0.00173626 137 0 6.44152e+07 0.0195113 194586 6.47665e+07 6.30149e+06 19658 3.20543e+07 0 0.116471 0.994576 0.859034 6.44152e+07 0.00244165 1.44495e+07 7.42372e+06 1.45046e+07 142 1.45509e+07 1.63557e+07 0.00208824 1.45345e+07 49.9719 0.00300443 0.996594 0 50.0951 GTEX-QXCU-0126-SM-2TC5Q 1 C1 2 ~6x4mm aliquots, both with ~0.5mm rim of adherent fat 7.8 Nerve Nerve - Tibial 0001323 1031 1425 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.643623 107851 0.956985 0.647177 0.744673 23273 1 76 0.00329275 117 0 5.07849e+07 0.0427244 203172 7.84714e+07 1.65193e+07 23301 2.50825e+07 0 0.212312 0.647177 0.481935 5.07849e+07 0.0169256 1.09723e+07 7.41082e+06 1.10971e+07 108 1.11873e+07 7.39787e+06 0.0100718 1.11334e+07 49.8793 0.00258912 0.650732 0 50.2827 GTEX-QXCU-0126-SM-2TO4U 1 C1 2 ~6x4mm aliquots, both with ~0.5mm rim of adherent fat 7.8 Nerve Nerve - Tibial 0001323 1031 1425 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0226-SM-2TC5W 1 C1 2 ~2.5mm d. aliquots; excellent clean specimens 7.3 Blood Vessel Artery - Tibial 0007610 1033 1423 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.562307 74163 0.970433 0.566807 0.827732 20537 1 76 0.00314005 103 0 4.2451e+07 0.0291452 190213 7.48949e+07 1.72902e+07 20545 2.09357e+07 0 0.142702 0.566807 0.469164 4.2451e+07 0.0179737 8.93539e+06 5.21271e+06 9.128e+06 105 9.24353e+06 8.25457e+06 0.010498 9.12212e+06 49.6695 0.00253973 0.571308 0 50.5332 GTEX-QXCU-0226-SM-2TO52 1 C1 2 ~2.5mm d. aliquots; excellent clean specimens 7.3 Blood Vessel Artery - Tibial 0007610 1033 1423 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0326-SM-2TC63 1 C1 2 ~8x6.5mm aliquots 7.2 Thyroid Thyroid 0002046 1051 1406 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.71801 198681 0.960194 0.722739 0.690263 23619 1 76 0.00324145 99 0 6.88159e+07 0.0395662 301728 9.52154e+07 1.89597e+07 23663 3.40344e+07 0 0.269932 0.722739 0.49888 6.88159e+07 0.0175991 1.49128e+07 1.17688e+07 1.50455e+07 110 1.52144e+07 8.84596e+06 0.0103733 1.51512e+07 49.8959 0.0031689 0.727468 0 50.2215 GTEX-QXCU-0326-SM-2TO68 1 C1 2 ~8x6.5mm aliquots 7.2 Thyroid Thyroid 0002046 1051 1406 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0626-SM-2TC69 1 C1 2 ~8.5x8mm aliquots, minimal congestion 8.1 Lung Lung 0008952 1058 1403 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.795561 125198 0.969473 0.800516 0.765146 22907 1 76 0.0032729 114 0 7.05464e+07 0.0301213 226034 8.81263e+07 1.74221e+07 22939 3.49135e+07 0 0.204326 0.800516 0.612511 7.05464e+07 0.0170137 1.54655e+07 9.08623e+06 1.55959e+07 123 1.57595e+07 1.13361e+07 0.0101008 1.57034e+07 49.9108 0.00256489 0.80547 0 50.2098 GTEX-QXCU-0626-SM-2TO5N 1 C1 2 ~8.5x8mm aliquots, minimal congestion 8.1 Lung Lung 0008952 1058 1403 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0826-SM-2TC6F 1 C1 2 ~7.5x5.5mm aliquots, early ischemic changes (contraction bands) 7.8 Heart Heart - Left Ventricle 0006566 1062 1401 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 EXCLUDE 0.144324 31952 0.971175 0.144858 0.834505 15247 1 76 0.00321304 77 0 9.48838e+06 0.0283172 292370 6.55013e+07 1.69589e+07 15248 4.64129e+06 0 0.13667 0.144858 0.120885 9.48838e+06 0.0194371 2.07824e+06 2.16608e+06 2.12694e+06 97 2.13367e+06 1.1833e+06 0.0112952 2.10117e+06 49.6164 0.00446357 0.145391 0 50.5791 GTEX-QXCU-0826-SM-2TO5Q 1 C1 2 ~7.5x5.5mm aliquots, early ischemic changes (contraction bands) 7.8 Heart Heart - Left Ventricle 0006566 1062 1401 BP-21102 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-0926-SM-48FEP 0 C1 6 ~7x2mm pieces, several with up to 0.5mm layer of adherent serosal adipose/fibrous tissue 7.8 Blood Vessel Artery - Aorta 0001496 1064 1400 BP-21103 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.98923 399435 0.968937 0.991637 0.78819 22094 1 76 0.0021864 129 0 6.14751e+07 0.0306648 113202 6.19935e+07 6.26322e+06 22115 3.05511e+07 0 0.180747 0.991637 0.781599 6.14751e+07 0.00300306 1.32554e+07 6.82196e+06 1.32951e+07 142 1.3334e+07 1.05866e+07 0.00259374 1.33609e+07 50.0504 0.00182603 0.994045 0 50.0748 GTEX-QXCU-1126-SM-48FE5 1 C1 6 ~8x3mm pieces 6.5 Esophagus Esophagus - Muscularis 0004648 1069 1396 BP-21103 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.986854 249604 0.970138 0.989613 0.774858 22197 1 76 0.00226678 131 0 6.74094e+07 0.0296837 564276 6.8117e+07 7.09026e+06 22226 3.34995e+07 0 0.195279 0.989613 0.76681 6.74094e+07 0.00307069 1.45007e+07 7.39932e+06 1.45953e+07 162 1.46078e+07 9.10174e+06 0.00266762 1.46655e+07 50.0985 0.00828393 0.992371 0 50.1625 GTEX-QXCU-1326-SM-48FE2 1 C1 2 ~12x3.5mm aliquots. Adherent 1mm layer of fat on both 7.1 Adrenal Gland Adrenal Gland 0002369 1075 1396 BP-21103 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990879 367920 0.968905 0.993126 0.768709 20869 1 76 0.00217369 128 0 6.59373e+07 0.0308937 1.01466e+06 6.63937e+07 6.57412e+06 20890 3.28028e+07 0 0.200196 0.993126 0.763425 6.59373e+07 0.00298923 1.437e+07 1.16928e+07 1.43795e+07 161 1.44073e+07 8.16909e+06 0.00258054 1.44802e+07 50.1263 0.0152824 0.995374 0 50.0164 GTEX-QXCU-1726-SM-2TC6L 0 C1 2 ~9x7.5mm aliquots. Interstitial fat ~10% of specimens 7.3 Muscle Muscle - Skeletal 0011907 1086 1389 BP-21104 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.76165 386119 0.966861 0.766298 0.835325 20186 1 76 0.00296067 116 0 7.7147e+07 0.0328839 1.32767e+06 1.00675e+08 2.05551e+07 20196 3.81978e+07 0 0.131536 0.766298 0.640108 7.7147e+07 0.0174078 1.64302e+07 2.23682e+07 1.67991e+07 140 1.69165e+07 1.30541e+07 0.0101404 1.66827e+07 49.652 0.0131877 0.770946 0 50.555 GTEX-QXCU-1726-SM-2TO54 0 C1 2 ~9x7.5mm aliquots. Interstitial fat ~10% of specimens 7.3 Muscle Muscle - Skeletal 0011907 1086 1389 BP-21104 RNA isolation_PAXgene Tissue miRNA 12/29/2011 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-QXCU-1926-SM-48FE4 1 C1 6 8x2.5mm pieces; mucosa well preserved generally, 20-30% of thickness 6.7 Stomach Stomach 0000945 1091 1387 BP-21104 RNA isolation_PAXgene Tissue miRNA 12/29/2011 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.984789 273247 0.982062 0.987161 0.832596 21898 1 76 0.00224979 272 0 7.51988e+07 0.0174911 463788 7.61769e+07 7.37914e+06 21916 3.73958e+07 0 0.149467 0.987161 0.821906 7.51988e+07 0.00305964 1.71725e+07 6.31955e+07 1.72656e+07 206 1.72944e+07 1.72718e+07 0.00265374 1.73153e+07 50.0302 0.0060883 0.989533 0 50.1352 GTEX-R3RS-0001-SM-2RXF4 C1 Blood Whole Blood 0013756 1048 BP-21163 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/04/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762436038_R03C01 GTEX-R3RS-0001-SM-2XK2Z C1 Blood Whole Blood 0013756 1048 BP-21163 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/04/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R03C01 GTEX-R3RS-0001-SM-3USSD C1 Blood Whole Blood 0013756 1048 BP-21163 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/04/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-R3RS-0001-SM-5URBE C1 Blood Whole Blood 0013756 1048 BP-21163 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/04/2012 LCSET-5270,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-R3RS-0005-SM-2TO73 C1 8.7 Blood Whole Blood 0013756 1048 BP-21182 RNA isolation_PAXgene Blood RNA (Manual) 01/05/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-0005-SM-3GAEH C1 8.7 Blood Whole Blood 0013756 1048 BP-21182 RNA isolation_PAXgene Blood RNA (Manual) 01/05/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.532035 146542 0.976572 0.53381 0.795357 16801 1 76 0.00228293 97 0 3.35797e+07 0.0204087 47120 6.29057e+07 9.20629e+06 16806 1.65506e+07 0 0.181215 0.53381 0.42457 3.35797e+07 0.00892489 7.92024e+06 4.22032e+07 7.9136e+06 120 7.90751e+06 8.35886e+06 0.00559286 8.03677e+06 50.4054 0.000749058 0.535586 0 49.9791 GTEX-R3RS-0008-SM-48FF1 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1152 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.99219 509938 0.975987 0.994289 0.866365 20318 1 76 0.00170355 154 0 6.5787e+07 0.0236599 175216 6.61649e+07 6.59525e+06 20332 3.27417e+07 0 0.109621 0.994289 0.861418 6.5787e+07 0.00234349 1.46413e+07 9.65127e+06 1.46538e+07 148 1.47017e+07 1.6232e+07 0.00202284 1.47362e+07 50.0586 0.00264817 0.996388 0 50.0213 GTEX-R3RS-0126-SM-2TO5G 1 C1 6 pieces, up to 8x2.5 mm 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1151 755 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-0126-SM-3GIJL 1 C1 6 pieces, up to 8x2.5 mm 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 1151 755 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.65469 96336 0.969408 0.656441 0.765223 22756 1 76 0.00246445 141 0 4.92416e+07 0.0304233 271097 7.5013e+07 7.03706e+06 22782 2.44346e+07 0 0.204185 0.656441 0.502324 4.92416e+07 0.00713546 1.06853e+07 4.45848e+06 1.07967e+07 136 1.07865e+07 6.86362e+06 0.00479373 1.08226e+07 50.0835 0.003614 0.658191 0 50.2591 GTEX-R3RS-0226-SM-EYYVE 1 C1 2 pieces, 9x7 & 11x 6mm 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 1154 752 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.986694 121528 0.970882 0.988867 0.756663 22282 1 76 0.00226165 108 0 5.08937e+07 0.0287744 261636 5.14667e+07 1.8172e+06 22310 2.53273e+07 0 0.214219 0.988867 0.748239 5.08937e+07 0.00323088 1.11455e+07 5.33034e+06 1.12304e+07 118 1.12215e+07 7.4397e+06 0.0027452 1.12569e+07 50.0787 0.00508359 0.991039 0 50.1895 GTEX-R3RS-0426-SM-2TO5J 1 C1 2 pieces 3.8x3.5 & 5x1.8 mm 6.8 Nerve Nerve - Tibial 0001323 1169 742 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-0526-SM-2TO59 1 C1 2 pieces 11x5 & 8.6x5 mm; 1 with ~10% adipose and adjacent blood vessels and nerve 7.6 Muscle Muscle - Skeletal 0011907 1175 736 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-0526-SM-3GADG 1 C1 2 pieces 11x5 & 8.6x5 mm; 1 with ~10% adipose and adjacent blood vessels and nerve 7.6 Muscle Muscle - Skeletal 0011907 1175 736 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.962705 343947 0.976488 0.967158 0.841689 21481 1 76 0.00230951 142 0 8.90396e+07 0.023297 682830 9.20631e+07 1.32779e+07 21496 4.41955e+07 0 0.134799 0.967158 0.814046 8.90396e+07 0.00906746 1.90478e+07 1.05142e+07 1.93894e+07 185 1.95182e+07 1.74761e+07 0.00567292 1.92896e+07 49.7055 0.00741698 0.971612 0 50.4444 GTEX-R3RS-0626-SM-48FE1 2 C1 2 pieces 7x7 & 7x6 mm; 1 piece has 90% adjacent adipose tissue; other has ducts and lobules with ~20% admixed adipose tissue 6.6 Breast Breast - Mammary Tissue 0008367 1185 727 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988372 336238 0.972318 0.99062 0.709445 24122 1 76 0.00237205 130 0 6.73354e+07 0.0271472 148590 6.7973e+07 6.95326e+06 24159 3.34556e+07 0 0.262872 0.99062 0.702791 6.73354e+07 0.00317826 1.48974e+07 7.30873e+06 1.495e+07 140 1.50013e+07 1.04987e+07 0.00277424 1.49955e+07 49.9904 0.00218601 0.992868 0 50.0881 GTEX-R3RS-0726-SM-2TO5R 2 C1 2 pieces 7x6.7 & 8x7 mm 6 Thyroid Thyroid 0002046 1190 723 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-0726-SM-3GIJR 2 C1 2 pieces 7x6.7 & 8x7 mm 6 Thyroid Thyroid 0002046 1190 723 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.300605 48219 0.96011 0.303418 0.770347 19962 1 76 0.00295559 125 0 1.74223e+07 0.0395998 107886 5.74202e+07 8.47759e+06 19968 8.5243e+06 0 0.189763 0.303418 0.233737 1.74223e+07 0.0090053 3.73904e+06 2.26756e+06 3.79e+06 129 3.8567e+06 2.63443e+06 0.0059524 3.83101e+06 49.8329 0.00187889 0.306231 0 50.3384 GTEX-R3RS-1026-SM-2TO5T 2 C1 2 pieces 11x10 & 10 x 8 mm; no infiltrates 6.5 Lung Lung 0008952 1197 717 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R3RS-1026-SM-3GADF 2 C1 2 pieces 11x10 & 10 x 8 mm; no infiltrates 6.5 Lung Lung 0008952 1197 717 BP-21198 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.465023 58237 0.966906 0.479976 0.747743 19855 1 76 0.00307992 109 0 1.98172e+07 0.0326362 57443 4.12879e+07 8.47731e+06 19860 9.5362e+06 0 0.219162 0.479976 0.358898 1.98172e+07 0.0119494 4.18121e+06 3.72865e+06 4.28716e+06 111 4.58349e+06 3.1207e+06 0.00737649 4.48606e+06 49.4629 0.00139128 0.494929 0 50.6256 GTEX-R3RS-1326-SM-48FE7 1 C1 6 pieces up to 6.5x1.4 mm; well preserved squamous mucosa and submucosal glands 7.5 Esophagus Esophagus - Mucosa 0006920 1208 708 BP-21199 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989802 293348 0.966979 0.991597 0.739673 22397 1 76 0.00217426 131 0 6.7141e+07 0.0328277 464291 6.77099e+07 6.60820e+06 22422 3.34131e+07 0 0.227306 0.991597 0.733458 6.7141e+07 0.00295731 1.49921e+07 1.08313e+07 1.50471e+07 146 1.50734e+07 1.03997e+07 0.00256507 1.50915e+07 50.0301 0.00685706 0.993391 0 50.0915 GTEX-R3RS-1426-SM-EXOHE 1 C1 6 pieces up to 9x2 mm 5.5 Esophagus Esophagus - Muscularis 0004648 1210 706 BP-21199 RNA isolation_PAXgene Tissue miRNA 01/06/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984655 309809 0.969482 0.986489 0.786716 23546 1 76 0.00213209 165 0 8.18779e+07 0.030279 1.05405e+06 8.29993e+07 5.07074e+06 23571 4.07251e+07 0 0.182765 0.986489 0.776087 8.18779e+07 0.0033622 1.76824e+07 7.98978e+06 1.78774e+07 202 1.78121e+07 1.288e+07 0.002746 1.78915e+07 50.1112 0.0126995 0.988322 0 50.2741 GTEX-R45C-0003-SM-2RXEW C1 Blood Whole Blood 0013756 904 BP-21186 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/05/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6992696029_R04C01 GTEX-R45C-0003-SM-2XK31 C1 Blood Whole Blood 0013756 904 BP-21186 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/05/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R05C02 GTEX-R45C-0006-SM-2TWCB C1 8.1 Blood Whole Blood 0013756 904 BP-21182 RNA isolation_PAXgene Blood RNA (Manual) 01/05/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R45C-0006-SM-3GAD6 C1 8.1 Blood Whole Blood 0013756 904 BP-21182 RNA isolation_PAXgene Blood RNA (Manual) 01/05/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.857635 146646 0.989128 0.862585 0.795871 16985 1 76 0.00263564 89 0 7.75537e+07 0.00892342 84978 8.99085e+07 1.40515e+07 16987 3.84102e+07 0 0.193258 0.862585 0.686506 7.75537e+07 0.0108407 1.83907e+07 1.47164e+08 1.88935e+07 124 1.8975e+07 2.16751e+07 0.00671463 1.87826e+07 49.7452 0.000945161 0.867534 0 50.6743 GTEX-R45C-0008-SM-48FF2 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1036 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991555 420843 0.977939 0.993882 0.860794 20332 1 76 0.00177081 154 0 6.57869e+07 0.0217185 184913 6.61919e+07 6.74086e+06 20340 3.27354e+07 0 0.117145 0.993882 0.855527 6.57869e+07 0.00249379 1.46874e+07 8.5218e+06 1.47553e+07 146 1.48122e+07 1.6375e+07 0.00213145 1.47863e+07 49.9562 0.00279359 0.996208 0 50.1153 GTEX-R45C-0126-SM-EAZ2R 1 C1 6 pieces up to 9X3 mm; 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1035 1430 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.981092 257808 0.970889 0.981879 0.745082 24612 1 76 0.00207074 216 0 9.06415e+07 0.0288894 874140 9.23143e+07 7.79758e+06 24654 4.51603e+07 0 0.225807 0.981879 0.731581 9.06415e+07 0.0029297 1.99688e+07 9.27355e+06 2.01566e+07 241 2.00676e+07 1.23645e+07 0.00249987 2.01315e+07 50.0796 0.00946917 0.982667 0 50.2341 GTEX-R45C-0226-SM-EVYAJ 1 C1 2 pieces, 12x9 & 11x9 mm, one with large central unfixed hole 5.5 Adipose Tissue Adipose - Subcutaneous 0002190 1039 1427 BP-21288 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.99057 254372 0.975807 0.99117 0.789992 22710 1 76 0.00197137 170 0 7.59176e+07 0.0238219 365880 7.6594e+07 3.28653e+06 22749 3.78392e+07 0 0.185815 0.99117 0.783017 7.59176e+07 0.00291516 1.67485e+07 6.97034e+06 1.69154e+07 185 1.68754e+07 1.29051e+07 0.00244298 1.68349e+07 49.9399 0.00477688 0.991769 0 50.2479 GTEX-R45C-0326-SM-2TWB2 2 C1 2 pieces, 4x4 & 3x3 mm arteries; one with medial calcification 6.1 Blood Vessel Artery - Tibial 0007610 1063 1404 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R45C-0526-SM-2TWC1 2 C1 2 pieces, both 9x7 mm; 6.5 Muscle Muscle - Skeletal 0011907 1068 1401 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R45C-0926-SM-2TWCY 1 C1 2 pieces, 10x9 & 10x7 mm; slight to moderate interstitial fibrosis; no inflammation or obvious infarction 6 Heart Heart - Left Ventricle 0006566 1113 1360 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R45C-0926-SM-3GAD4 1 C1 2 pieces, 10x9 & 10x7 mm; slight to moderate interstitial fibrosis; no inflammation or obvious infarction 6 Heart Heart - Left Ventricle 0006566 1113 1360 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.739951 116336 0.979955 0.745497 0.872293 19897 1 76 0.00224273 120 0 5.85073e+07 0.0199118 2.70823e+06 7.8481e+07 1.39293e+07 19901 2.8962e+07 0 0.107662 0.745497 0.650291 5.85073e+07 0.00937551 1.29422e+07 8.86558e+06 1.3339e+07 171 1.35187e+07 5.54443e+06 0.00578259 1.31613e+07 49.3302 0.0345081 0.751042 0 50.7549 GTEX-R45C-1226-SM-48FEE 2 C1 6 pieces up to 7x2 mm; squamous surface partly sloughed and detached; dilated submucosal veins (varices) 6.2 Esophagus Esophagus - Mucosa 0006920 1120 1358 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.986591 319971 0.964561 0.989139 0.774554 23052 1 76 0.0021266 130 0 6.18833e+07 0.035259 518143 6.25627e+07 6.22784e+06 23076 3.07649e+07 0 0.190006 0.989139 0.766142 6.18833e+07 0.00301492 1.36472e+07 9.96417e+06 1.3724e+07 150 1.37463e+07 8.94734e+06 0.00256961 1.37838e+07 50.0681 0.00828197 0.991687 0 50.1403 GTEX-R45C-2126-SM-EZ6KZ 3 C1 8 pieces up to 7.4x1.2 mm; mucosa completely autolyzed, muscularis slight to moderate autolysis 5.8 Colon Colon - Transverse 0001157 1178 1307 BP-21288 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987052 189450 0.974225 0.988514 0.801903 24386 1 76 0.00252388 211 0 8.65628e+07 0.0253021 657706 8.75686e+07 6.42481e+06 24411 4.31181e+07 0 0.172322 0.988514 0.792692 8.65628e+07 0.00380411 1.89661e+07 8.79692e+06 1.90277e+07 250 1.90098e+07 1.50528e+07 0.00316305 1.91058e+07 50.1258 0.00751075 0.989975 0 50.0811 GTEX-R45C-2826-SM-EZ6XR 1 C1 2 pieces, 9x8 & 8x7 mm; no endometrium, only myometrium Uterus Uterus 0000995 1198 1293 BP-83108 DNA Extraction from Paxgene-derived Lysate Plate Based 02/07/2017 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-R53T-0003-SM-2RXEX B1 Blood Whole Blood 0013756 -64 BP-21208 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428098_R04C01 GTEX-R53T-0003-SM-2XK2X B1 Blood Whole Blood 0013756 -64 BP-21208 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R05C02 GTEX-R53T-0003-SM-3UZFQ B1 Blood Whole Blood 0013756 -64 BP-21208 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-R53T-0003-SM-5URBL B1 Blood Whole Blood 0013756 -64 BP-21208 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/06/2012 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-R53T-0005-SM-2TO74 B1 9.1 Blood Whole Blood 0013756 -64 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-0005-SM-3GADK B1 9.1 Blood Whole Blood 0013756 -64 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.948742 550878 0.963222 0.953784 0.793567 20183 1 76 0.00286872 118 0 8.22712e+07 0.035577 258154 8.62577e+07 1.22345e+07 20190 4.07747e+07 0 0.169655 0.953784 0.756891 8.22712e+07 0.0105442 1.83706e+07 8.04473e+07 1.88034e+07 138 1.89391e+07 1.89861e+07 0.00668617 1.86777e+07 49.6525 0.00299282 0.958827 0 50.5821 GTEX-R53T-0008-SM-48FEW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 185 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992616 421182 0.982073 0.994635 0.893504 19331 1 76 0.00169306 152 0 6.69462e+07 0.0175704 292569 6.73073e+07 6.73358e+06 19338 3.33272e+07 0 0.0885686 0.994635 0.888711 6.69462e+07 0.00235147 1.49881e+07 8.16573e+06 1.49953e+07 150 1.50278e+07 1.79498e+07 0.0020216 1.50943e+07 50.1103 0.00434677 0.996654 0 50.012 GTEX-R53T-0226-SM-48FEH 1 B1 2 aliquots, ~9x7mm. Foci of chronic inflammation 9.2 Adrenal Gland Adrenal Gland 0002369 66 1135 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990692 307597 0.974503 0.993302 0.819992 22314 1 76 0.00195474 122 0 5.84478e+07 0.025169 990805 5.88419e+07 5.9469e+06 22335 2.907e+07 0 0.154511 0.993302 0.8145 5.84478e+07 0.00269039 1.29639e+07 7.04756e+06 1.2921e+07 139 1.29786e+07 1.03404e+07 0.0023216 1.30522e+07 50.1414 0.0168384 0.995912 0 49.9172 GTEX-R53T-0326-SM-48FEC 1 B1 2 aliquots, ~8x7mm. Moderate congestion 9.4 Liver Liver 0001114 69 1132 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990042 421447 0.977899 0.992938 0.854359 20401 1 76 0.00193101 115 0 6.66723e+07 0.0217518 56279 6.71465e+07 6.56885e+06 20419 3.31506e+07 0 0.123539 0.992938 0.848326 6.66723e+07 0.00272441 1.44101e+07 9.87385e+06 1.44159e+07 130 1.4495e+07 1.76685e+07 0.00232656 1.45174e+07 50.0386 0.000838153 0.995834 0 50.01 GTEX-R53T-0426-SM-48FEM 1 B1 2 aliquots, ~10x7mm. Remarkably well-preserved, minimal fat (<5%) 7.9 Pancreas Pancreas 0001150 74 1127 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057,LCSET-3181 05/26/2013 TruSeq.v1 RNASEQ 0.990388 402323 0.981909 0.992317 0.871538 21347 1 76 0.00223063 109 0 7.81047e+07 0.017684 350027 7.87095e+07 6.76517e+06 21359 3.8838e+07 0 0.110371 0.992317 0.864841 7.81047e+07 0.00303821 1.80551e+07 2.11104e+07 1.81715e+07 122 1.81623e+07 2.40087e+07 0.00263364 1.82218e+07 50.0817 0.00444708 0.994246 0 50.1607 GTEX-R53T-0526-SM-2TO76 1 B1 2 ~9x7mm aliquots. Scattered colloid cysts, up to 3mm in dimensions 6.2 Thyroid Thyroid 0002046 84 1117 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-0526-SM-3GADL 1 B1 2 ~9x7mm aliquots. Scattered colloid cysts, up to 3mm in dimensions 6.2 Thyroid Thyroid 0002046 84 1117 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.929538 639018 0.944298 0.934273 0.706158 24766 1 76 0.0025414 134 0 7.98766e+07 0.0553967 533159 8.5496e+07 1.21914e+07 24813 3.96184e+07 0 0.238141 0.934273 0.659744 7.98766e+07 0.00912267 1.69608e+07 2.29377e+07 1.71833e+07 154 1.73395e+07 1.13874e+07 0.00581536 1.71885e+07 49.7814 0.00623607 0.939008 0 50.3258 GTEX-R53T-0626-SM-2TO5Y 1 B1 2 aliquots, ~9x5mm. Patchy mild edema, a few hyaline membranes 7.5 Lung Lung 0008952 89 1112 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-0726-SM-48FCS 0 B1 2 aliquots, ~3mm d, mild atherosclerosis (<20% occlusion), one aliquot with nubbin of fat 6.6 Blood Vessel Artery - Coronary 0001621 93 1108 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990101 251375 0.971995 0.992263 0.816246 22956 1 76 0.00205585 134 0 6.54589e+07 0.0276104 385289 6.59693e+07 6.60938e+06 22979 3.25547e+07 0 0.155749 0.992263 0.809931 6.54589e+07 0.00281757 1.425e+07 5.5833e+06 1.42641e+07 150 1.42968e+07 1.22276e+07 0.00243588 1.4357e+07 50.105 0.00584043 0.994426 0 50.0247 GTEX-R53T-0826-SM-48FCP 1 B1 6 pieces, ~8.5x1mm; 4 of 6 have ~1.5mm layer of adherent fibroadipose tissue 5.9 Blood Vessel Artery - Aorta 0001496 96 1105 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989944 368975 0.972211 0.992043 0.814317 23103 1 76 0.00201429 154 0 7.10586e+07 0.0274099 559166 7.16285e+07 7.05559e+06 23132 3.53348e+07 0 0.157894 0.992043 0.807838 7.10586e+07 0.00282089 1.55037e+07 5.96055e+06 1.55612e+07 174 1.55769e+07 1.19803e+07 0.00241673 1.56369e+07 50.0961 0.00780647 0.994143 0 50.0926 GTEX-R53T-0926-SM-2TO5U 1 B1 2 aliquots, ~8x6mm. Mild ischemic changes 7.4 Heart Heart - Left Ventricle 0006566 100 1101 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-0926-SM-3GADH 1 B1 2 aliquots, ~8x6mm. Mild ischemic changes 7.4 Heart Heart - Left Ventricle 0006566 100 1101 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.91246 225302 0.980587 0.917205 0.849638 21557 1 76 0.00219202 152 0 8.10248e+07 0.0191377 3.29391e+06 8.83389e+07 1.16624e+07 21583 4.02048e+07 0 0.130949 0.917205 0.779292 8.10248e+07 0.00890119 1.77078e+07 9.98808e+06 1.81687e+07 194 1.82344e+07 1.26774e+07 0.00552925 1.80035e+07 49.6814 0.0372872 0.92195 0 50.6424 GTEX-R53T-1026-SM-48FCO 0 B1 6 pieces, ~8.5x3mm 7.6 Esophagus Esophagus - Muscularis 0004648 116 1085 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988019 471647 0.971651 0.990625 0.815755 22199 1 76 0.00201566 134 0 6.35598e+07 0.0280566 540003 6.41613e+07 6.43954e+06 22218 3.15923e+07 0 0.155896 0.990625 0.808107 6.35598e+07 0.0028614 1.37401e+07 5.62498e+06 1.37556e+07 151 1.3765e+07 1.0997e+07 0.00243742 1.38911e+07 50.2281 0.00841634 0.99323 0 50.0282 GTEX-R53T-1126-SM-48FD4 0 B1 6 pieces, ~9x1.5mm. Squamous mucosa is ~15-20% of thickness. 9.3 Esophagus Esophagus - Mucosa 0006920 120 1081 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.98461 376735 0.973317 0.986658 0.798242 22701 1 76 0.00208455 146 0 7.0209e+07 0.0263103 415324 7.11584e+07 6.9459e+06 22722 3.4935e+07 0 0.175075 0.986658 0.787592 7.0209e+07 0.00280636 1.5692e+07 9.10111e+06 1.56689e+07 155 1.57047e+07 1.3705e+07 0.00244471 1.57993e+07 50.1501 0.00583662 0.988707 0 49.963 GTEX-R53T-1226-SM-48FCT 1 B1 6 pieces, ~8.5x3mm. Mucosa remarkably well preserved, ~20-25% of thickness 6.9 Stomach Stomach 0000945 131 1070 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.983751 250162 0.983081 0.986036 0.855511 21678 1 76 0.00183043 299 0 7.12697e+07 0.0166527 446887 7.2279e+07 6.97053e+06 21692 3.5446e+07 0 0.127571 0.986036 0.843564 7.12697e+07 0.00260975 1.65277e+07 9.01437e+07 1.67148e+07 211 1.67735e+07 2.10255e+07 0.00221919 1.66324e+07 49.7888 0.0061828 0.988321 0 50.2815 GTEX-R53T-1326-SM-48FCQ 1 B1 6 pieces, ~8x2mm. Mucosa moderately well preserved, ~10-15% of thickness 8.2 Colon Colon - Transverse 0001157 138 1063 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987425 392055 0.969234 0.989892 0.790096 23754 1 76 0.00256998 164 0 7.32263e+07 0.0284904 810074 7.3974e+07 7.27995e+06 23785 3.63274e+07 0 0.179138 0.989892 0.78211 7.32263e+07 0.00340262 1.63561e+07 1.01056e+07 1.62426e+07 173 1.6289e+07 1.1981e+07 0.00298526 1.64828e+07 50.2956 0.0109508 0.99236 0 49.8259 GTEX-R53T-1526-SM-48FEK 0 B1 2 aliquots, ~11x8mm. Rare minute foci of atrophic ductal elements 6.6 Breast Breast - Mammary Tissue 0008367 176 1025 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990709 340217 0.972239 0.992735 0.796288 23402 1 76 0.00208429 140 0 6.52058e+07 0.0273519 748293 6.5683e+07 6.27713e+06 23423 3.2432e+07 0 0.175951 0.992735 0.790502 6.52058e+07 0.00280575 1.4353e+07 6.35121e+06 1.43429e+07 157 1.43713e+07 1.04969e+07 0.00244428 1.44531e+07 50.1419 0.0113925 0.99476 0 49.9823 GTEX-R53T-1626-SM-3GAEW 0 B1 2 aliquots, ~9x6mm 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 183 1018 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.799263 150109 0.972546 0.800642 0.796406 22066 1 76 0.00204856 175 0 8.04842e+07 0.0270188 703381 1.00525e+08 7.30614e+06 22096 3.9963e+07 0 0.17614 0.800642 0.637636 8.04842e+07 0.00754327 1.76354e+07 6.10192e+06 1.78634e+07 199 1.77826e+07 1.27473e+07 0.00479118 1.78447e+07 50.0872 0.0069971 0.802021 0 50.3211 GTEX-R53T-1826-SM-2TO5Z 0 B1 2 aliquots, ~11x6mm. Minimal fat 7.2 Muscle Muscle - Skeletal 0011907 190 1011 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-1826-SM-3GIJX 0 B1 2 aliquots, ~11x6mm. Minimal fat 7.2 Muscle Muscle - Skeletal 0011907 190 1011 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.894841 298630 0.978007 0.897314 0.864318 19855 1 76 0.00214294 171 0 7.70606e+07 0.0218038 3.19796e+06 8.58791e+07 6.86808e+06 19863 3.82844e+07 0 0.113689 0.897314 0.775565 7.70606e+07 0.00684479 1.65706e+07 1.20985e+07 1.68032e+07 213 1.6683e+07 1.22367e+07 0.00448739 1.68626e+07 50.2676 0.0372379 0.899788 0 50.3486 GTEX-R53T-2026-SM-2TO4X 0 B1 2 aliquots, ~4mm d. Good clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 206 995 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R53T-2026-SM-3GIJF 0 B1 2 aliquots, ~4mm d. Good clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 206 995 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.905842 151113 0.976175 0.908517 0.836054 20398 1 76 0.00240188 150 0 5.66869e+07 0.0233879 336917 6.23949e+07 4.63829e+06 20411 2.81299e+07 0 0.140122 0.908517 0.759569 5.66869e+07 0.00725649 1.21831e+07 3.82996e+06 1.23890e+07 163 1.23394e+07 9.97854e+06 0.00482203 1.23936e+07 50.1095 0.00539975 0.911192 0 50.4191 GTEX-R55C-0003-SM-2RXF1 B1 Blood Whole Blood 0013756 -67 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_5Mbatch5_March12 05/03/2012 Illumina OMNI SNP Array OMNI 6992629005_R02C01 GTEX-R55C-0003-SM-2XK34 B1 Blood Whole Blood 0013756 -67 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R06C02 GTEX-R55C-0003-SM-3USSH B1 Blood Whole Blood 0013756 -67 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-R55C-0003-SM-5URCJ B1 Blood Whole Blood 0013756 -67 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-5270,LCSET-5435 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-R55C-0005-SM-2TO5O B1 8.4 Blood Whole Blood 0013756 -67 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-0005-SM-3GAE9 B1 8.4 Blood Whole Blood 0013756 -67 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.97982 966533 0.95161 0.981603 0.768619 18684 1 76 0.00229074 127 0 1.00282e+08 0.0457838 395966 1.02161e+08 6.61578e+06 18700 4.97499e+07 0 0.182991 0.981603 0.754479 1.00282e+08 0.0080463 2.22612e+07 9.84675e+07 2.26765e+07 152 2.25627e+07 2.21268e+07 0.00516329 2.25569e+07 49.9936 0.0038759 0.983386 0 50.4621 GTEX-R55C-0008-SM-48FCF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 241 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990437 787446 0.980485 0.992882 0.880788 19593 1 76 0.00166782 147 0 6.63343e+07 0.0191816 235676 6.68099e+07 6.47853e+06 19603 3.29844e+07 0 0.0996964 0.992882 0.874518 6.63343e+07 0.00221648 1.48406e+07 9.48373e+06 1.49009e+07 145 1.49244e+07 1.78126e+07 0.00194147 1.49743e+07 50.0835 0.00352756 0.995326 0 50.1014 GTEX-R55C-0126-SM-48FEQ 1 B1 2 pieces, 10x7 & 11x6 mm; capsule present on one piece (aliquot should be 5 mm beneath capsule) 7.1 Spleen Spleen 0002106 132 1045 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 TruSeq.v1 RNASEQ 0.989527 324087 0.96242 0.99176 0.796118 23211 1 76 0.00232265 132 0 6.27839e+07 0.0366699 506442 6.33055e+07 6.30251e+06 23235 3.12044e+07 0 0.166302 0.99176 0.789557 6.27839e+07 0.00305081 1.38012e+07 1.10374e+07 1.3804e+07 149 1.3828e+07 9.86913e+06 0.00268591 1.39176e+07 50.1616 0.00799996 0.993992 0 50.0051 GTEX-R55C-0226-SM-48FEO 1 B1 2 pieces, 9x7 & 9x7 mm; 1 with ~20% nerves and ganglion cells; other with 50% adipose tissue centrally 8.2 Adrenal Gland Adrenal Gland 0002369 136 1042 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990194 342010 0.971503 0.992799 0.816438 23667 1 76 0.00203948 154 0 6.69305e+07 0.0281378 1.20382e+06 6.7416e+07 6.95657e+06 23689 3.32806e+07 0 0.155065 0.992799 0.810559 6.69305e+07 0.00282179 1.481e+07 8.20094e+06 1.48328e+07 177 1.48579e+07 9.57698e+06 0.00242961 1.49482e+07 50.1515 0.0178566 0.995404 0 50.0386 GTEX-R55C-0326-SM-2TO5H 1 B1 2 pieces, 9x7 & 9x7 mm; 1 has ~10% adipose 8.1 Heart Heart - Left Ventricle 0006566 146 1033 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-0326-SM-3GAF1 1 B1 2 pieces, 9x7 & 9x7 mm; 1 has ~10% adipose 8.1 Heart Heart - Left Ventricle 0006566 146 1033 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.971531 187228 0.984493 0.973191 0.844777 19806 1 76 0.00183683 191 0 7.7301e+07 0.0153272 2.02106e+06 7.94305e+07 5.23167e+06 19822 3.84404e+07 0 0.139716 0.973191 0.822129 7.7301e+07 0.00729643 1.68427e+07 1.44875e+07 1.71216e+07 234 1.67254e+07 9.46218e+06 0.00456197 1.72833e+07 50.8202 0.0254444 0.974851 0 50.4106 GTEX-R55C-0426-SM-EVR2W 0 B1 6 pieces up to 8.6x1.5 mm; minimal intimal thickening 5.5 Blood Vessel Artery - Aorta 0001496 148 1032 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.989032 279909 0.973775 0.990837 0.822888 22867 1 76 0.00205201 279 0 1.21075e+08 0.025839 516991 1.22194e+08 9.12162e+06 22908 6.0285e+07 0 0.150887 0.990837 0.815348 1.21075e+08 0.00315845 2.63441e+07 9.47147e+06 2.66266e+07 313 2.65725e+07 2.16387e+07 0.00260422 2.65985e+07 50.0244 0.00423089 0.992642 0 50.2667 GTEX-R55C-0526-SM-2TO6D 1 B1 2 pieces, 10x7 & 8x5 mm; patchy emphysema 8 Lung Lung 0008952 154 1027 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-0526-SM-3GIKA 1 B1 2 pieces, 10x7 & 8x5 mm; patchy emphysema 8 Lung Lung 0008952 154 1027 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.967316 416597 0.97156 0.970576 0.788129 24286 1 76 0.00251133 173 0 7.99641e+07 0.0279797 520012 8.23882e+07 6.39721e+06 24316 3.96743e+07 0 0.183431 0.970576 0.764939 7.99641e+07 0.00743599 1.76345e+07 6.34067e+06 1.77754e+07 203 1.7825e+07 1.22497e+07 0.00496539 1.78406e+07 50.0218 0.00631173 0.973837 0 50.199 GTEX-R55C-0626-SM-2TF4Q 1 B1 2 pieces, 9x9 & 10x5 mm 6.6 Thyroid Thyroid 0002046 158 1024 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.675917 149598 0.962623 0.67823 0.709254 23447 1 76 0.00233046 117 0 5.98559e+07 0.0370839 302234 8.82531e+07 9.36801e+06 23489 2.95041e+07 0 0.253369 0.67823 0.481037 5.98559e+07 0.00386018 1.30007e+07 6.31224e+06 1.31259e+07 131 1.31054e+07 8.00475e+06 0.00309271 1.3201e+07 50.1816 0.00342463 0.680543 0 50.2397 GTEX-R55C-0626-SM-2TO5I 1 B1 2 pieces, 9x9 & 10x5 mm 6.6 Thyroid Thyroid 0002046 158 1024 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-0726-SM-48FCN 0 B1 6 pieces up to 10x5.6 mm; 7.1 Esophagus Esophagus - Muscularis 0004648 169 1013 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.954275 235226 0.97539 0.956469 0.824744 21444 1 76 0.0019313 137 0 6.1729e+07 0.0243374 738858 6.45383e+07 6.34471e+06 21459 3.06999e+07 0 0.150645 0.956469 0.788843 6.1729e+07 0.00272513 1.33563e+07 5.31457e+06 1.33434e+07 152 1.33517e+07 1.03752e+07 0.00232731 1.34824e+07 50.2435 0.0114484 0.958664 0 49.9759 GTEX-R55C-0826-SM-48FCL 0 B1 3 pieces up to 6.4x4.6 mm; 1 has prominent muscularis mucosae 8.6 Esophagus Esophagus - Mucosa 0006920 170 1013 BP-21397 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987115 374789 0.975574 0.989623 0.822954 21806 1 76 0.00205771 156 0 7.1321e+07 0.0241619 476898 7.20689e+07 7.31558e+06 21826 3.54801e+07 0 0.152621 0.989623 0.814414 7.1321e+07 0.00295363 1.60548e+07 1.02239e+07 1.61069e+07 168 1.61383e+07 1.33656e+07 0.00250453 1.61994e+07 50.0943 0.00661725 0.992132 0 50.081 GTEX-R55C-1026-SM-48FCM 1 B1 6 pieces up to 8x4.5 mm; all have had their mucosa removed so that only the muscularis and submucosa remain 8.3 Stomach Stomach 0000945 181 1004 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990243 419982 0.975998 0.992563 0.833503 21633 1 76 0.00184583 143 0 6.69544e+07 0.0237309 371965 6.74561e+07 6.61024e+06 21648 3.3312e+07 0 0.142495 0.992563 0.827304 6.69544e+07 0.00264049 1.47702e+07 8.08476e+06 1.48009e+07 164 1.48151e+07 1.21527e+07 0.00224223 1.49105e+07 50.1605 0.00551418 0.994882 0 50.0518 GTEX-R55C-1126-SM-48FCJ 1 B1 6 pieces up to 8x5 mm; 5 of 6 have mucosa 6.3 Colon Colon - Transverse 0001157 186 1000 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987355 280030 0.973415 0.990307 0.816778 22796 1 76 0.0021046 156 0 6.50252e+07 0.0260595 1.417e+06 6.56616e+07 6.76955e+06 22817 3.23115e+07 0 0.156637 0.990307 0.808861 6.50252e+07 0.00302393 1.44359e+07 8.41488e+06 1.44075e+07 183 1.43874e+07 8.01927e+06 0.0025629 1.46317e+07 50.4209 0.0215804 0.99326 0 49.9508 GTEX-R55C-1426-SM-48FED 1 B1 2 pieces, 8x6 & 8x7 mm; good spermatogenesis 7 Testis Testis 0000473 208 981 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.9884 514390 0.930738 0.991194 0.743004 32358 1 76 0.0020809 167 0 7.77874e+07 0.0689647 753929 7.84785e+07 7.90006e+06 32415 3.86744e+07 0 0.187734 0.991194 0.736461 7.77874e+07 0.00291709 1.62649e+07 1.40542e+07 1.62626e+07 168 1.63445e+07 1.24062e+07 0.00249782 1.63866e+07 50.0642 0.00960682 0.993987 0 49.9965 GTEX-R55C-1626-SM-48FEG 1 B1 2 pieces, 16.7x9 & 10.7x8.6 mm; large central holes in both (inadequate fixation); only outer ~1.5 mm preserved for molecular studies 7 Adipose Tissue Adipose - Subcutaneous 0002190 246 944 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.98848 493016 0.975676 0.991591 0.822396 22331 1 76 0.00202734 165 0 7.19319e+07 0.0239971 416710 7.25419e+07 7.15892e+06 22347 3.57407e+07 0 0.15328 0.991591 0.81548 7.19319e+07 0.00292277 1.58712e+07 7.28356e+06 1.58953e+07 179 1.59593e+07 1.25014e+07 0.00247365 1.60258e+07 50.104 0.00574441 0.994701 0 50.0379 GTEX-R55C-1726-SM-2TO69 1 B1 2 pieces, 9x7 & 9x8 mm 7 Muscle Muscle - Skeletal 0011907 250 941 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-1726-SM-3GADJ 1 B1 2 pieces, 9x7 & 9x8 mm 7 Muscle Muscle - Skeletal 0011907 250 941 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.797216 201517 0.981832 0.801172 0.880135 18525 1 76 0.0022541 133 0 6.65871e+07 0.0179842 1.26166e+06 8.31122e+07 1.27994e+07 18528 3.30145e+07 0 0.101697 0.801172 0.705139 6.65871e+07 0.00958676 1.44928e+07 1.17985e+07 1.49089e+07 175 1.48702e+07 1.0329e+07 0.00590233 1.48046e+07 49.8894 0.0151803 0.805127 0 50.7077 GTEX-R55C-1826-SM-2TO5C 1 B1 2 pieces, 3x2.5 & 4x1.8 mm; clean (no adipose tissue); mildly elevated intimal plaques 7.7 Blood Vessel Artery - Tibial 0007610 255 937 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55C-1826-SM-3GADI 1 B1 2 pieces, 3x2.5 & 4x1.8 mm; clean (no adipose tissue); mildly elevated intimal plaques 7.7 Blood Vessel Artery - Tibial 0007610 255 937 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.975295 218907 0.975915 0.980195 0.829599 21325 1 76 0.0024996 144 0 7.46198e+07 0.0236965 256465 7.61275e+07 1.08754e+07 21340 3.69973e+07 0 0.146316 0.980195 0.813169 7.46198e+07 0.0097183 1.60338e+07 5.37383e+06 1.62782e+07 167 1.63799e+07 1.34902e+07 0.0060909 1.62761e+07 49.8411 0.00336889 0.985095 0 50.3782 GTEX-R55C-1926-SM-2TF4K 1 B1 2 pieces, 4x4 & 3x3 mm; 10% peripheral fat in 1; <5% in other. 6.2 Nerve Nerve - Tibial 0001323 257 936 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.906945 130999 0.964633 0.909794 0.748544 23725 1 76 0.00236026 163 0 7.22836e+07 0.0351164 414855 7.94504e+07 7.17525e+06 23760 3.57962e+07 0 0.216088 0.909794 0.681021 7.22836e+07 0.0035502 1.57051e+07 6.78513e+06 1.59796e+07 174 1.59503e+07 9.65534e+06 0.00295337 1.59454e+07 49.9924 0.00522156 0.912644 0 50.4331 GTEX-R55C-1926-SM-2TO4Y 1 B1 2 pieces, 4x4 & 3x3 mm; 10% peripheral fat in 1; <5% in other. 6.2 Nerve Nerve - Tibial 0001323 257 936 BP-21341 RNA isolation_PAXgene Tissue miRNA 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0006-SM-2TWBJ C1 8.6 Blood Whole Blood 0013756 265 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0006-SM-3GIJS C1 8.6 Blood Whole Blood 0013756 265 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.729829 218403 0.970961 0.732448 0.778179 18759 1 76 0.00318476 126 0 5.1742e+07 0.0274169 173989 7.06426e+07 7.07136e+06 18768 2.56215e+07 0 0.192782 0.732448 0.569976 5.1742e+07 0.00818484 1.1506e+07 2.41038e+07 1.16579e+07 145 1.16806e+07 9.9874e+06 0.00567586 1.16669e+07 49.9707 0.00246295 0.735067 0 50.328 GTEX-R55D-0008-SM-48FEV C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 360 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992508 442267 0.980099 0.99444 0.879087 19674 1 76 0.00179994 156 0 6.87273e+07 0.0195555 300930 6.91116e+07 6.81785e+06 19682 3.4214e+07 0 0.101012 0.99444 0.874199 6.87273e+07 0.00244079 1.53594e+07 9.19361e+06 1.54022e+07 151 1.54328e+07 1.80315e+07 0.00211975 1.54657e+07 50.0532 0.00435426 0.996371 0 50.0695 GTEX-R55D-0126-SM-48FEL 1 C1 2 aliquots. Spermatogenesis present 6.3 Testis Testis 0000473 327 1198 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988793 371966 0.931562 0.991329 0.727357 31501 1 76 0.00229709 133 0 6.43388e+07 0.0681485 727866 6.49016e+07 6.58492e+06 31552 3.19986e+07 0 0.204205 0.991329 0.72105 6.43388e+07 0.0031786 1.34513e+07 1.06612e+07 1.34562e+07 134 1.35214e+07 1.00449e+07 0.00273672 1.35378e+07 50.0303 0.0112149 0.993864 0 50.009 GTEX-R55D-0226-SM-2TWBG 0 C1 6 pieces. Squamous epithelium is -2-3% of thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 360 1166 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0326-SM-48FES 1 C1 2 aliquots 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 363 1163 BP-21289 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989518 395100 0.974739 0.992267 0.795885 22802 1 76 0.00226583 166 0 7.66782e+07 0.0249724 353415 7.72758e+07 7.97927e+06 22825 3.81146e+07 0 0.178854 0.992267 0.78973 7.66782e+07 0.00312418 1.68598e+07 7.61323e+06 1.68807e+07 185 1.69354e+07 1.26614e+07 0.00269382 1.70117e+07 50.1124 0.00457343 0.995015 0 50.031 GTEX-R55D-0426-SM-2TWB1 0 C1 2 aliquots. Good clean specimen, minimal adherent fat 7.4 Blood Vessel Artery - Tibial 0007610 371 1156 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0526-SM-EWRM3 0 C1 2 aliquots. Good clean specimen, minimal adherent fat 5.5 Nerve Nerve - Tibial 0001323 372 1156 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984896 275060 0.965397 0.987896 0.749267 24302 1 76 0.00256209 224 0 8.77793e+07 0.0343552 282724 8.88548e+07 6.33241e+06 24345 4.36481e+07 0 0.21613 0.987896 0.740198 8.77793e+07 0.00325043 1.91451e+07 7.79092e+06 1.94141e+07 212 1.94207e+07 1.27752e+07 0.00289716 1.93765e+07 49.943 0.00318187 0.990897 0 50.3488 GTEX-R55D-0626-SM-2TWBB 0 C1 2 aliquots. Minimal (<5%) interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 380 1148 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0626-SM-3GAD5 0 C1 2 aliquots. Minimal (<5%) interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 380 1148 BP-21287 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.937685 281407 0.970795 0.94166 0.841066 21643 1 76 0.00241379 203 0 1.01952e+08 0.0289652 1.1295e+06 1.08269e+08 1.57595e+07 21663 5.0643e+07 0 0.129729 0.94166 0.791998 1.01952e+08 0.0090621 2.15959e+07 1.44756e+07 2.20109e+07 221 2.2114e+07 1.93788e+07 0.00572391 2.18787e+07 49.7326 0.0104324 0.945635 0 50.4759 GTEX-R55D-0826-SM-48FEA 1 C1 2 aliquots. One all adipose tissue, the other with focal ductal elements 6.7 Breast Breast - Mammary Tissue 0008367 403 1126 BP-21290 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987935 282428 0.974447 0.991224 0.813683 21832 1 76 0.0023673 135 0 6.40631e+07 0.0253129 411206 6.46304e+07 6.75907e+06 21847 3.18391e+07 0 0.160763 0.991224 0.806542 6.40631e+07 0.00328208 1.41199e+07 7.15308e+06 1.40905e+07 158 1.41165e+07 9.74226e+06 0.00282317 1.42939e+07 50.3122 0.00636243 0.994513 0 49.9479 GTEX-R55D-0926-SM-2TWDB 1 C1 2 aliquots. DAD type changes and alveolar congestion present 7.4 Lung Lung 0008952 406 1124 BP-21289 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-0926-SM-325AK 1 C1 2 aliquots. DAD type changes and alveolar congestion present Lung Lung 0008952 406 1124 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003157_R04C01 GTEX-R55D-0926-SM-325I1 1 C1 2 aliquots. DAD type changes and alveolar congestion present Lung Lung 0008952 406 1124 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R02C02 GTEX-R55D-0926-SM-3GAEU 1 C1 2 aliquots. DAD type changes and alveolar congestion present 7.4 Lung Lung 0008952 406 1124 BP-21289 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.456774 25599 0.969101 0.459215 0.773551 19350 1 76 0.00256807 118 0 1.68553e+07 0.0306259 126026 3.67046e+07 4.30747e+06 19359 8.27584e+06 0 0.19555 0.459215 0.355226 1.68553e+07 0.00913505 3.70405e+06 1.46138e+06 3.74221e+06 129 3.75703e+06 2.33655e+06 0.00583411 3.77698e+06 50.1324 0.00343352 0.461655 0 50.2563 GTEX-R55D-0926-SM-4X61C 1 C1 2 aliquots. DAD type changes and alveolar congestion present Lung Lung 0008952 406 1124 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-R55D-0926-SM-7DRPI 1 C1 2 aliquots. DAD type changes and alveolar congestion present Lung Lung 0008952 406 1124 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-R55D-0926-SM-CLTGD 1 C1 2 aliquots. DAD type changes and alveolar congestion present Lung Lung 0008952 406 1124 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-R55D-1026-SM-2TWC3 1 C1 6 pieces, several with up to 1.5 mm adherent fibrous tissue 8.1 Blood Vessel Artery - Aorta 0001496 407 1124 BP-21289 RNA isolation_PAXgene Tissue miRNA 01/10/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55D-1026-SM-3GAEQ 1 C1 6 pieces, several with up to 1.5 mm adherent fibrous tissue 8.1 Blood Vessel Artery - Aorta 0001496 407 1124 BP-21289 RNA isolation_PAXgene Tissue miRNA 01/10/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.878115 164672 0.974356 0.880106 0.810029 23757 1 76 0.00223343 173 0 9.37966e+07 0.0251529 253516 1.06574e+08 8.94842e+06 23789 4.65841e+07 0 0.164327 0.880106 0.712911 9.37966e+07 0.0075996 2.03392e+07 6.59847e+06 2.05591e+07 214 2.04929e+07 1.63448e+07 0.00491045 2.06037e+07 50.1349 0.00237877 0.882096 0 50.2689 GTEX-R55D-1126-SM-48FEB 0 C1 6 pieces, Squamous mucosa, well-preserved, 15-20% of thickness 8.6 Esophagus Esophagus - Mucosa 0006920 411 1120 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987541 474692 0.968761 0.990251 0.794078 23363 1 76 0.00270983 168 0 7.7995e+07 0.0301237 272419 7.87629e+07 7.84882e+06 23386 3.87497e+07 0 0.174683 0.990251 0.786337 7.7995e+07 0.00346965 1.73563e+07 1.36999e+07 1.74297e+07 177 1.75202e+07 1.34935e+07 0.0030887 1.74727e+07 49.9322 0.00345872 0.992961 0 50.1055 GTEX-R55D-1226-SM-48FE9 0 C1 6 pieces 7.9 Esophagus Esophagus - Muscularis 0004648 413 1119 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991171 277433 0.973139 0.993079 0.813266 21936 1 76 0.00223054 133 0 6.15327e+07 0.026553 448796 6.19616e+07 6.09779e+06 21953 3.06224e+07 0 0.159873 0.993079 0.807637 6.15327e+07 0.00299876 1.33567e+07 5.66808e+06 1.33658e+07 146 1.33642e+07 1.01278e+07 0.00261391 1.34703e+07 50.1977 0.00724313 0.994987 0 50.0171 GTEX-R55D-1426-SM-48FEN 1 C1 2 aliquots, remarkably well-preserved, minimal adipose tissue 6.2 Pancreas Pancreas 0001150 419 1114 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989584 269338 0.977571 0.992084 0.825229 21430 1 76 0.00231567 100 0 6.99357e+07 0.0222445 246252 7.04937e+07 6.99624e+06 21448 3.47826e+07 0 0.152342 0.992084 0.818697 6.99357e+07 0.00313743 1.6076e+07 2.14227e+07 1.61927e+07 113 1.61904e+07 1.89753e+07 0.00272551 1.62543e+07 50.0985 0.00349325 0.994585 0 50.1809 GTEX-R55D-1526-SM-48FEJ 1 C1 6 pieces, mucosa well-preserved, ~25% of thickness 8 Stomach Stomach 0000945 421 1113 BP-21337 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989608 287092 0.971647 0.992514 0.809812 22400 1 76 0.00217841 160 0 7.17294e+07 0.0281295 480328 7.22704e+07 7.53156e+06 22424 3.56655e+07 0 0.161835 0.992514 0.80375 7.17294e+07 0.00302056 1.55758e+07 6.82149e+06 1.56324e+07 171 1.56423e+07 1.17878e+07 0.00259825 1.57626e+07 50.1914 0.00664626 0.995419 0 50.0908 GTEX-R55D-1826-SM-48FEF 1 C1 6 pieces, mucosa less well preserved, 15-20% of thickness 7.8 Colon Colon - Transverse 0001157 427 1109 BP-21338 RNA isolation_PAXgene Tissue miRNA 01/11/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987705 334076 0.971126 0.990736 0.79894 22772 1 76 0.00274737 134 0 6.0967e+07 0.0275853 1.03806e+06 6.1537e+07 6.19953e+06 22793 3.02632e+07 0 0.172186 0.990736 0.791538 6.0967e+07 0.00361097 1.36362e+07 8.22891e+06 1.35324e+07 146 1.35882e+07 8.90179e+06 0.00317785 1.37461e+07 50.2887 0.0168688 0.993768 0 49.809 GTEX-R55E-0003-SM-2MRIC C1 Blood Whole Blood 0013756 716 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321051_R02C01 GTEX-R55E-0003-SM-2XK28 C1 Blood Whole Blood 0013756 716 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R01C01 GTEX-R55E-0003-SM-3UZFL C1 Blood Whole Blood 0013756 716 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-R55E-0003-SM-5URBX C1 Blood Whole Blood 0013756 716 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-R55E-0006-SM-2TC5G C1 7.1 Blood Whole Blood 0013756 716 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.776813 741244 0.925929 0.782174 0.756336 19433 1 76 0.00376598 99 0 4.94204e+07 0.0734289 497091 6.31834e+07 1.37262e+07 19443 2.4433e+07 0 0.169593 0.782174 0.591586 4.94204e+07 0.0174856 1.04426e+07 5.27874e+07 1.07707e+07 111 1.08938e+07 9.16918e+06 0.0105788 1.06353e+07 49.3997 0.00786743 0.787535 0 50.7733 GTEX-R55E-0006-SM-2TO6I C1 7.1 Blood Whole Blood 0013756 716 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0008-SM-48FCG C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 925 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991125 592340 0.980473 0.993527 0.87375 20357 1 76 0.0017292 185 0 8.14509e+07 0.0191831 303473 8.19816e+07 8.27976e+06 20364 4.05267e+07 0 0.106724 0.993527 0.868094 8.14509e+07 0.00242764 1.81919e+07 1.13272e+07 1.82704e+07 181 1.83173e+07 2.17583e+07 0.00207758 1.83384e+07 50.0288 0.00370172 0.99593 0 50.1077 GTEX-R55E-0011-R11A-SM-2TC6I C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.957167 318827 0.940504 0.962319 0.702963 24581 1 76 0.00340468 124 0 8.96555e+07 0.0589125 920405 9.31661e+07 1.5897e+07 24628 4.43949e+07 0 0.237541 0.962319 0.676475 8.96555e+07 0.0157245 1.9152e+07 1.71675e+07 1.92423e+07 148 1.94229e+07 1.17674e+07 0.00953161 1.93926e+07 49.961 0.00987918 0.967471 0 50.1176 GTEX-R55E-0011-R11A-SM-2TO6C C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R1A-SM-2TC6N C1, A1 6.2 Brain Brain - Hippocampus 0001954 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.640231 373819 0.953206 0.645851 0.834779 23191 1 76 0.00327227 106 0 6.46352e+07 0.046127 3.86023e+06 1.00078e+08 2.13787e+07 23204 3.18638e+07 0 0.118427 0.645851 0.539142 6.46352e+07 0.0180461 1.39158e+07 1.93931e+07 1.42189e+07 135 1.43742e+07 7.55966e+06 0.0105949 1.42384e+07 49.7628 0.0385723 0.65147 0 50.5387 GTEX-R55E-0011-R1A-SM-2TO6L C1, A1 6.2 Brain Brain - Hippocampus 0001954 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R2A-SM-EYYV9 C1, A1 5.6 Brain Brain - Substantia nigra 0002038 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.983485 200888 0.970789 0.987551 0.854273 23595 1 76 0.00250868 278 0 8.50276e+07 0.0287629 7.28836e+06 8.60994e+07 3.39665e+06 23617 4.22359e+07 0 0.116516 0.987551 0.843639 8.50276e+07 0.00384335 1.87998e+07 1.02418e+07 1.91694e+07 308 1.91396e+07 1.07248e+07 0.00317327 1.91341e+07 49.9928 0.0846505 0.991618 0 50.4867 GTEX-R55E-0011-R4A-SM-2TC5H C1, A1 6.9 Brain Brain - Amygdala 0001876 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.697914 372025 0.950467 0.702554 0.829039 23155 1 76 0.00323818 108 0 6.14735e+07 0.0489684 3.13804e+06 8.75e+07 1.85341e+07 23172 3.0422e+07 0 0.121428 0.702554 0.582445 6.14735e+07 0.0165991 1.32534e+07 1.85191e+07 1.34778e+07 127 1.3599e+07 8.05414e+06 0.00987449 1.3482e+07 49.784 0.0358633 0.707195 0 50.4198 GTEX-R55E-0011-R4A-SM-2TO6H C1, A1 6.9 Brain Brain - Amygdala 0001876 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R5A-SM-2TC5N C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.659054 411480 0.944725 0.662746 0.81329 22748 1 76 0.00332759 93 0 5.56349e+07 0.0547945 3.44833e+06 8.39461e+07 1.76157e+07 22762 2.7521e+07 0 0.131435 0.662746 0.539005 5.56349e+07 0.017318 1.19349e+07 2.09008e+07 1.21754e+07 112 1.2237e+07 6.49366e+06 0.0102838 1.21371e+07 49.7949 0.0410779 0.666438 0 50.4987 GTEX-R55E-0011-R5A-SM-2TO4Q C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R6A-SM-2TC5T C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.835074 359358 0.952583 0.839312 0.827646 23348 1 76 0.00329033 106 0 6.64614e+07 0.0469081 3.88452e+06 7.91856e+07 1.52213e+07 23365 3.29338e+07 0 0.124938 0.839312 0.694653 6.64614e+07 0.0171309 1.4401e+07 1.79289e+07 1.46246e+07 135 1.47062e+07 8.4623e+06 0.0101756 1.46061e+07 49.8293 0.049056 0.84355 0 50.3851 GTEX-R55E-0011-R6A-SM-2TO6K C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R7A-SM-2TC5Z C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.597781 618266 0.932704 0.601879 0.798504 22648 1 76 0.00335505 97 0 5.82241e+07 0.0667986 3.54561e+06 9.67373e+07 2.10214e+07 22661 2.87768e+07 0 0.1342 0.601879 0.480603 5.82241e+07 0.0180857 1.22661e+07 3.087e+07 1.26548e+07 115 1.27508e+07 6.51081e+06 0.0106702 1.25086e+07 49.5206 0.036652 0.605976 0 50.7798 GTEX-R55E-0011-R7A-SM-2TO6A C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R8A-SM-2TC66 C1, A1 6.6 Brain Brain - Hypothalamus 0001898 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.656641 461940 0.938741 0.660696 0.791101 23483 1 76 0.00331732 110 0 5.98374e+07 0.0608012 3.22638e+06 9.05673e+07 1.93267e+07 23502 2.95859e+07 0 0.14764 0.660696 0.522677 5.98374e+07 0.0177517 1.27764e+07 2.41149e+07 1.30657e+07 117 1.31535e+07 7.20198e+06 0.0104902 1.3012e+07 49.7295 0.0356241 0.66475 0 50.5598 GTEX-R55E-0011-R8A-SM-2TO6E C1, A1 6.6 Brain Brain - Hypothalamus 0001898 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0011-R9A-SM-2TC6C C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.431154 296047 0.934396 0.433111 0.774355 21789 1 76 0.00322392 111 0 3.44955e+07 0.0650738 1.07517e+06 7.9646e+07 1.70421e+07 21801 1.69684e+07 0 0.160041 0.433111 0.335382 3.44955e+07 0.0181401 7.32794e+06 1.49534e+07 7.5508e+06 103 7.5799e+06 4.54789e+06 0.0106483 7.4413e+06 49.5387 0.0134994 0.435067 0 50.7489 GTEX-R55E-0011-R9A-SM-2TO6R C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 720 BP-21968 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0126-SM-2TC5Y 1 C1 6 pieces up to 7x3.5 mm 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 924 1258 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.918974 129848 0.967663 0.924594 0.766665 25143 1 76 0.00334942 156 0 8.06366e+07 0.0320963 404874 8.7213e+07 1.704e+07 25179 3.99283e+07 0 0.200997 0.924594 0.708854 8.06366e+07 0.0165653 1.75769e+07 9.74298e+06 1.77341e+07 141 1.78958e+07 1.31951e+07 0.00991721 1.78582e+07 49.9474 0.00464236 0.930214 0 50.2226 GTEX-R55E-0126-SM-2TO6U 1 C1 6 pieces up to 7x3.5 mm 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 924 1258 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0326-SM-48FD2 1 C1 2 pieces, 4x2 & 3x3 mm; ~60% adipose surrounds vessels 5.9 Blood Vessel Artery - Tibial 0007610 939 1244 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989276 316364 0.971362 0.992178 0.823356 22131 1 76 0.00208328 139 0 6.4436e+07 0.0282993 309558 6.4944e+07 6.4538e+06 22153 3.2022e+07 0 0.148006 0.992178 0.816916 6.4436e+07 0.00294506 1.39396e+07 6.09478e+06 1.39793e+07 154 1.40157e+07 1.13073e+07 0.00251291 1.40854e+07 50.124 0.00476653 0.99508 0 50.0712 GTEX-R55E-0426-SM-2TC65 1 C1 2 pieces, 5x4 & 5x3 mm; ~20% adipose in and around nerve 6.3 Nerve Nerve - Tibial 0001323 940 1244 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.662218 199310 0.95556 0.667042 0.743558 23838 1 76 0.00321985 114 0 6.04617e+07 0.0441594 305344 9.06416e+07 1.74672e+07 23875 2.98674e+07 0 0.212003 0.667042 0.495984 6.04617e+07 0.0177281 1.30181e+07 1.1209e+07 1.31529e+07 103 1.33087e+07 8.89424e+06 0.0104215 1.32611e+07 49.9105 0.0033687 0.671866 0 50.2575 GTEX-R55E-0426-SM-2TO4J 1 C1 2 pieces, 5x4 & 5x3 mm; ~20% adipose in and around nerve 6.3 Nerve Nerve - Tibial 0001323 940 1244 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0526-SM-2TC6B 1 C1 2 pieces, 10x5 & 11x5 8 Muscle Muscle - Skeletal 0011907 944 1240 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.847465 498548 0.963242 0.851974 0.853283 19661 1 76 0.00295769 121 0 8.32946e+07 0.0364744 1.72814e+06 9.77666e+07 1.99359e+07 19668 4.13046e+07 0 0.109959 0.851974 0.726975 8.32946e+07 0.0166817 1.75671e+07 2.56306e+07 1.79965e+07 149 1.81022e+07 1.5741e+07 0.00978338 1.78281e+07 49.6186 0.0176762 0.856483 0 50.6037 GTEX-R55E-0526-SM-2TO56 1 C1 2 pieces, 10x5 & 11x5 8 Muscle Muscle - Skeletal 0011907 944 1240 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-0726-SM-48FCZ 1 C1 2 pieces, 7x6 & 8x5 mm; spermatogenesis 5.9 Testis Testis 0000473 958 1228 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989657 438771 0.919932 0.991351 0.720184 32084 1 76 0.00219617 154 0 7.14785e+07 0.0797757 1.08646e+06 7.21021e+07 6.71892e+06 32140 3.55691e+07 0 0.199748 0.991351 0.713955 7.14785e+07 0.00290473 1.4808e+07 1.21501e+07 1.47967e+07 152 1.48225e+07 1.03223e+07 0.00254984 1.48993e+07 50.1293 0.0150684 0.993045 0 49.9809 GTEX-R55E-0826-SM-2TC5M 1 C1 2 pieces, 8.7x6 & 7x7 mm 6.9 Thyroid Thyroid 0002046 962 1225 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.755125 455273 0.946747 0.759331 0.793295 23102 1 76 0.00320919 107 0 5.96944e+07 0.052922 254627 7.86145e+07 1.56062e+07 23124 2.95659e+07 0 0.153451 0.759331 0.602374 5.96944e+07 0.0178316 1.26755e+07 2.09955e+07 1.28673e+07 107 1.29764e+07 1.036e+07 0.0104799 1.2869e+07 49.7922 0.00323893 0.763538 0 50.3756 GTEX-R55E-0826-SM-2TO6B 1 C1 2 pieces, 8.7x6 & 7x7 mm 6.9 Thyroid Thyroid 0002046 962 1225 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-1026-SM-2TC5S 1 C1 2 pieces, 7.4x8.7 & 7.7x6.5 mm 7.2 Heart Heart - Left Ventricle 0006566 967 1221 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.724133 382964 0.965053 0.72891 0.847612 21165 1 76 0.00332174 100 0 6.96454e+07 0.0347228 3.26206e+06 9.55472e+07 2.0634e+07 21179 3.44589e+07 0 0.117441 0.72891 0.617833 6.96454e+07 0.0178697 1.50536e+07 2.02446e+07 1.54397e+07 131 1.56135e+07 1.10506e+07 0.010548 1.52716e+07 49.4464 0.0341408 0.733688 0 50.6331 GTEX-R55E-1026-SM-2TO6T 1 C1 2 pieces, 7.4x8.7 & 7.7x6.5 mm 7.2 Heart Heart - Left Ventricle 0006566 967 1221 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-1126-SM-48FDZ 1 C1 6 pieces up to 8.5x1 mm; recent adventitial hemorrhage in all, up to 20% of piece 6.7 Blood Vessel Artery - Aorta 0001496 968 1221 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988735 303718 0.972986 0.991161 0.770579 22196 1 76 0.00231565 135 0 6.98274e+07 0.0266514 141663 7.04501e+07 7.24926e+06 22221 3.46916e+07 0 0.202407 0.991161 0.763768 6.98274e+07 0.00309442 1.50822e+07 5.67057e+06 1.51325e+07 158 1.51858e+07 1.10749e+07 0.00270408 1.51939e+07 50.0132 0.00201083 0.993588 0 50.0831 GTEX-R55E-1326-SM-48FCR 1 C1 6 pieces up to 7x1.8 mm; 7.3 Esophagus Esophagus - Mucosa 0006920 977 1214 BP-21406 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989633 581889 0.966121 0.992012 0.787928 22231 1 76 0.00211435 132 0 6.65708e+07 0.0336921 516176 6.71069e+07 6.3991e+06 22246 3.30994e+07 0 0.178193 0.992012 0.781634 6.65708e+07 0.00296948 1.48262e+07 1.14419e+07 1.48591e+07 155 1.48804e+07 1.0636e+07 0.00254089 1.49625e+07 50.1376 0.00769185 0.99439 0 50.0556 GTEX-R55E-1826-SM-EXOHD 1 C1 2 pieces 13x5 mm each; 1 has 7.5x2 mm adipose tissue along edge 5.5 Adrenal Gland Adrenal Gland 0002369 986 1209 BP-21444 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.986877 494723 0.971949 0.989056 0.835424 22795 1 76 0.00216958 372 0 1.04717e+08 0.0278037 5.14952e+06 1.05875e+08 5.67134e+06 22821 5.21128e+07 0 0.136524 0.989056 0.826281 1.04717e+08 0.00359715 2.28434e+07 1.22842e+07 2.3173e+07 345 2.31557e+07 1.48493e+07 0.00288179 2.30686e+07 49.9058 0.0486375 0.991236 0 50.3581 GTEX-R55E-2026-SM-EZ6L1 1 C1 2 pieces, 7.5x7.5 mm & 10x5 mm; 10x5mm is all medulla; 7.5 square piece is 25% medulla, 75% cortex; 5.7 Kidney Kidney - Medulla 0001293 992 1204 BP-21444 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989655 282359 0.960058 0.991107 0.780171 25153 1 76 0.00267936 272 0 1.00966e+08 0.0397408 2.13998e+06 1.01872e+08 7.79238e+06 25196 5.03168e+07 0 0.179886 0.991107 0.773233 1.00966e+08 0.00367671 2.19064e+07 1.08807e+07 2.21106e+07 303 2.21056e+07 1.31341e+07 0.0031773 2.20462e+07 49.9327 0.0210066 0.992558 0 50.232 GTEX-R55E-2526-SM-2TC6H 1 C1 4 pieces ~5 mm cubed, 1 piece fragmented 6.7 Brain Brain - Cerebellum 0002037 1002 1200 BP-21446 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.834799 450388 0.940029 0.839567 0.736261 24538 1 76 0.00362778 122 0 8.00919e+07 0.0596719 1.43722e+06 9.53966e+07 1.96064e+07 24571 3.96335e+07 0 0.203768 0.839567 0.618141 8.00919e+07 0.0174009 1.7025e+07 2.27933e+07 1.72585e+07 142 1.74046e+07 8.72833e+06 0.0104752 1.72768e+07 49.8158 0.0150657 0.844336 0 50.3405 GTEX-R55E-2526-SM-2TO6F 1 C1 4 pieces ~5 mm cubed, 1 piece fragmented 6.7 Brain Brain - Cerebellum 0002037 1002 1200 BP-21446 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55E-2726-SM-48FCX 1 C1 1 piece 5x5 mm anterior pituitary 6.8 Pituitary Pituitary 0000007 1005 1198 BP-21446 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988399 648469 0.948024 0.991357 0.747808 25365 1 76 0.00224267 149 0 7.49383e+07 0.0517474 375354 7.55916e+07 7.77758e+06 25407 3.7238e+07 0 0.200215 0.991357 0.741345 7.49383e+07 0.00321271 1.5742e+07 1.77455e+07 1.58563e+07 166 1.59177e+07 1.12521e+07 0.00272624 1.59017e+07 49.9749 0.00496555 0.994316 0 50.1809 GTEX-R55F-0005-SM-2TF4W D1 6.7 Blood Whole Blood 0013756 1276 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.599275 794718 0.883658 0.604074 0.64705 16881 1 76 0.00284762 98 0 4.67899e+07 0.115618 413065 7.74573e+07 9.54267e+06 16890 2.29583e+07 0 0.236608 0.604074 0.390866 4.67899e+07 0.00483826 9.34345e+06 7.878e+07 9.99635e+06 115 1.00938e+07 7.67504e+06 0.00383503 9.58945e+06 48.7188 0.00533281 0.608872 0 51.688 GTEX-R55F-0005-SM-2TWC8 D1 6.7 Blood Whole Blood 0013756 1276 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-0008-SM-48FE6 D1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 1284 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-3057 04/18/2013 TruSeq.v1 EXCLUDE 0.993529 335700 0.983979 0.995184 0.878497 18872 1 76 0.0016963 173 0 7.37946e+07 0.0156524 413138 7.41518e+07 7.22868e+06 18878 3.67551e+07 0 0.105482 0.995184 0.874266 7.37946e+07 0.00224379 1.6364e+07 7.81556e+06 1.6425e+07 170 1.64206e+07 1.89524e+07 0.00196959 1.64898e+07 50.1052 0.00557152 0.996838 0 50.093 GTEX-R55F-0011-R5A-SM-2TF5L D1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.516708 546086 0.931983 0.517366 0.816896 20627 1 76 0.00267776 123 0 5.51492e+07 0.0675917 5.34752e+06 1.06596e+08 1.30559e+07 20649 2.71758e+07 0 0.115087 0.517366 0.422634 5.51492e+07 0.00450827 1.15017e+07 2.84365e+07 1.23741e+07 160 1.22348e+07 4.21056e+06 0.00359185 1.16782e+07 48.8362 0.0501662 0.518024 0 51.827 GTEX-R55F-0011-R5A-SM-2TWCL D1, A1 6.7 Brain Brain - Caudate (basal ganglia) 0001873 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-0011-R6A-SM-2TF4L D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.833099 641786 0.936365 0.837529 0.809663 22399 1 76 0.0026258 153 0 6.8742e+07 0.0632996 5.13996e+06 8.20771e+07 7.32157e+06 22418 3.39952e+07 0 0.126702 0.837529 0.678116 6.8742e+07 0.0037745 1.43777e+07 2.74302e+07 1.5164e+07 201 1.51594e+07 6.62782e+06 0.00319711 1.47072e+07 49.243 0.0626235 0.841959 0 51.3308 GTEX-R55F-0011-R6A-SM-2TWCP D1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-0011-R8A-SM-2TF4F D1, A1 7.5 Brain Brain - Hypothalamus 0001898 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.486264 427193 0.922876 0.486175 0.767697 21534 1 76 0.00254297 101 0 3.50499e+07 0.0766575 1.6063e+06 7.20932e+07 8.08009e+06 21553 1.72335e+07 0 0.155179 0.486175 0.373235 3.50499e+07 0.00443676 7.29455e+06 1.76479e+07 7.65851e+06 113 7.57116e+06 3.62407e+06 0.00349004 7.37019e+06 49.3275 0.0222809 0.486086 0 51.217 GTEX-R55F-0011-R8A-SM-2TWCT D1, A1 7.5 Brain Brain - Hypothalamus 0001898 1275 BP-22466 RNA isolation_PAXgene Tissue miRNA 02/14/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-0126-SM-48FCK 1 D1 6 pieces up to 9x3 mm; 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1287 1129 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 EXCLUDE 0.986794 275817 0.970912 0.988901 0.781612 23310 1 76 0.0021817 130 0 6.18709e+07 0.0288843 293415 6.25654e+07 5.93964e+06 23325 3.07587e+07 0 0.1893 0.988901 0.772937 6.18709e+07 0.00306807 1.35539e+07 7.76058e+06 1.36434e+07 142 1.36642e+07 1.09617e+07 0.00262394 1.36672e+07 50.0055 0.00468974 0.991008 0 50.1644 GTEX-R55F-0226-SM-48FCI 1 D1 2 piece, 7x5 & 7x6 mm;40-50% adipose tiissue 5.8 Nerve Nerve - Tibial 0001323 1290 1126 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-3057 04/18/2013 TruSeq.v1 EXCLUDE 0.987415 232135 0.962956 0.989478 0.717237 23170 1 76 0.00226418 129 0 5.64758e+07 0.0368038 262108 5.70764e+07 5.68395e+06 23196 2.80787e+07 0 0.245719 0.989478 0.70969 5.64758e+07 0.00294489 1.233e+07 6.91108e+06 1.23889e+07 124 1.24159e+07 8.08819e+06 0.00260383 1.24191e+07 50.0066 0.00459223 0.99154 0 50.1193 GTEX-R55F-0326-SM-3G3SE 2 D1 2 pieces, 9x9 & 8x8 mm; patchy emphysema & interstitial fibrosis Lung Lung 0008952 1300 1116 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840042_R04C01 GTEX-R55F-0326-SM-3G3TF 2 D1 2 pieces, 9x9 & 8x8 mm; patchy emphysema & interstitial fibrosis Lung Lung 0008952 1300 1116 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R04C01 GTEX-R55F-0326-SM-4X616 2 D1 2 pieces, 9x9 & 8x8 mm; patchy emphysema & interstitial fibrosis Lung Lung 0008952 1300 1116 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-R55F-0326-SM-7DRPK 2 D1 2 pieces, 9x9 & 8x8 mm; patchy emphysema & interstitial fibrosis Lung Lung 0008952 1300 1116 BP-23760 DNA Isolation from Tissue via QIAgen Spin Column 04/03/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-R55F-1226-SM-2TF59 1 D1 4 pieces up to 5x4 mm; good Purkinje cells 6.1 Brain Brain - Cerebellum 0002037 1363 1045 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.606148 243460 0.933093 0.60717 0.707971 22139 1 76 0.00275622 102 0 5.24067e+07 0.0665862 1.62286e+06 8.6313e+07 9.73310e+06 22167 2.58205e+07 0 0.225123 0.60717 0.429859 5.24067e+07 0.00435974 1.10217e+07 1.14531e+07 1.13842e+07 125 1.13358e+07 4.48155e+06 0.00355663 1.11396e+07 49.5635 0.0188021 0.608192 0 50.8087 GTEX-R55F-1226-SM-2TWB5 1 D1 4 pieces up to 5x4 mm; good Purkinje cells 6.1 Brain Brain - Cerebellum 0002037 1363 1045 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-1326-SM-2TF5F 1 D1 4 pieces up to 6x5 mm; two pieces with focal artifacts and bone fragments 6.2 Brain Brain - Cortex 0001870 1366 1036 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.0931499 42007 0.948627 0.0911016 0.800504 17425 1 76 0.00272314 87 0 8.55564e+06 0.050418 385557 9.39132e+07 1.47951e+07 17429 4.00045e+06 0 0.148123 0.0911016 0.0729272 8.55564e+06 0.010266 1.85777e+06 2.24364e+06 1.96293e+06 103 1.86e+06 905952 0.00657935 1.78439e+06 48.9626 0.00410546 0.0890532 0 51.3762 GTEX-R55F-1326-SM-2TWBM 1 D1 4 pieces up to 6x5 mm; two pieces with focal artifacts and bone fragments 6.2 Brain Brain - Cortex 0001870 1366 1036 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-1326-SM-5S2V4 1 D1 4 pieces up to 6x5 mm; two pieces with focal artifacts and bone fragments 6.2 Brain Brain - Cortex 0001870 1366 1036 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.992204 575147 0.958644 0.994418 0.832249 24046 1 76 0.00205954 371 0 9.95952e+07 0.0410134 5.1235e+06 1.00154e+08 1.03044e+07 24060 4.95813e+07 0 0.126394 0.994418 0.827604 9.95952e+07 0.00309822 2.17666e+07 2.4978e+07 2.18652e+07 349 2.17839e+07 1.13904e+07 0.00257772 2.20531e+07 50.3071 0.0511561 0.996632 0 50.1129 GTEX-R55F-1426-SM-2TF53 1 D1 2 pieces, 9x8 &&7x6 mm; larger piece has adjacent veins on one side [~10%] 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1283 1125 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.910996 140858 0.977892 0.914265 0.794263 22797 1 76 0.00232963 169 0 8.11856e+07 0.0217635 233422 8.87988e+07 7.58097e+06 22841 4.02063e+07 0 0.18363 0.914265 0.726167 8.11856e+07 0.0035336 1.77921e+07 7.16437e+06 1.80701e+07 191 1.8119e+07 1.43132e+07 0.00292946 1.80228e+07 49.8669 0.00262866 0.917534 0 50.3875 GTEX-R55F-1426-SM-2TWAS 1 D1 2 pieces, 9x8 &&7x6 mm; larger piece has adjacent veins on one side [~10%] 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1283 1125 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-1526-SM-2TF4X 1 D1 2 pieces, 10x7 && 8x7 mm; larger piece has attached veins & adipose tissue, ~30% 6.5 Muscle Muscle - Skeletal 0011907 1288 1120 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.906926 159844 0.973102 0.909993 0.837151 19875 1 76 0.00232094 137 0 7.22263e+07 0.0266978 1.43352e+06 7.93701e+07 6.96542e+06 19891 3.5803e+07 0 0.135951 0.909993 0.761802 7.22263e+07 0.00352618 1.54455e+07 1.08905e+07 1.58685e+07 159 1.59093e+07 1.4426e+07 0.00292153 1.5629e+07 49.5555 0.0180612 0.913061 0 50.6755 GTEX-R55F-1526-SM-2TWBA 1 D1 2 pieces, 10x7 && 8x7 mm; larger piece has attached veins & adipose tissue, ~30% 6.5 Muscle Muscle - Skeletal 0011907 1288 1120 BP-21443 RNA isolation_PAXgene Tissue miRNA 01/13/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55F-1726-SM-2TF4R 1 D1 2 pieces, 12x6 & 10x4 mm; gynecomastia: ducts and fibrous tissue 6.9 Breast Breast - Mammary Tissue 0008367 1299 1109 BP-21404 RNA isolation_PAXgene Tissue miRNA 01/12/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.803384 127451 0.966662 0.80545 0.699961 24722 1 76 0.002549 146 0 7.50512e+07 0.0330138 352198 9.31792e+07 8.61072e+06 24782 3.71272e+07 0 0.266701 0.80545 0.563783 7.50512e+07 0.0039407 1.64146e+07 6.95538e+06 1.65906e+07 158 1.66167e+07 1.04843e+07 0.00324307 1.65708e+07 49.9309 0.00377979 0.807517 0 50.2666 GTEX-R55G-0003-SM-2MRIE B1 Blood Whole Blood 0013756 -72 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321051_R03C01 GTEX-R55G-0003-SM-2XK1C B1 Blood Whole Blood 0013756 -72 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R03C01 GTEX-R55G-0003-SM-3USRS B1 Blood Whole Blood 0013756 -72 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-R55G-0003-SM-5URBQ B1 Blood Whole Blood 0013756 -72 BP-21231 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/09/2012 LCSET-5270,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-R55G-0006-SM-2TC6O B1 9 Blood Whole Blood 0013756 -72 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.766398 974922 0.932125 0.771074 0.774492 17165 1 76 0.0033037 81 0 6.85728e+07 0.0667374 308678 8.89316e+07 1.92425e+07 17168 3.39329e+07 0 0.157633 0.771074 0.59719 6.85728e+07 0.0181868 1.50076e+07 1.09232e+08 1.52995e+07 104 1.54167e+07 1.61628e+07 0.0107001 1.52857e+07 49.7867 0.00347096 0.77575 0 50.4815 GTEX-R55G-0006-SM-2TO6P B1 9 Blood Whole Blood 0013756 -72 BP-21229 RNA isolation_PAXgene Blood RNA (Manual) 01/09/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55G-0008-SM-48FEX B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 189 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991747 483297 0.979818 0.993936 0.874415 19731 1 76 0.00172243 152 0 6.72229e+07 0.0198569 253519 6.7633e+07 6.65337e+06 19740 3.3451e+07 0 0.105403 0.993936 0.869112 6.72229e+07 0.00246911 1.50442e+07 8.70583e+06 1.50925e+07 147 1.51396e+07 1.74756e+07 0.00209495 1.51502e+07 50.0176 0.00374845 0.996125 0 50.0802 GTEX-R55G-0126-SM-48FDS 1 B1 2 aliquots, ~9x7mm. Mainly cortex, 5mm medulla fragment present 9.4 Adrenal Gland Adrenal Gland 0002369 73 845 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992591 276395 0.975685 0.99449 0.844617 21927 1 76 0.00185192 152 0 6.75269e+07 0.0238979 1.38485e+06 6.79011e+07 6.67039e+06 21942 3.36123e+07 0 0.131068 0.99449 0.839963 6.75269e+07 0.00248609 1.49885e+07 7.30787e+06 1.49812e+07 172 1.50002e+07 1.2059e+07 0.0021684 1.50845e+07 50.1401 0.0203952 0.996389 0 49.9877 GTEX-R55G-0226-SM-48FEI 1 B1 2 aliquots, ~8x7mm 7.7 Spleen Spleen 0002106 75 843 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987233 238670 0.959283 0.98925 0.769866 22770 1 76 0.00246768 115 0 5.55726e+07 0.0399675 255239 5.61765e+07 5.61425e+06 22789 2.76246e+07 0 0.189417 0.98925 0.76159 5.55726e+07 0.00316055 1.21793e+07 8.99196e+06 1.21938e+07 125 1.2219e+07 9.00946e+06 0.00281341 1.22643e+07 50.0926 0.00454352 0.991267 0 50.0297 GTEX-R55G-0326-SM-48FDM 1 B1 2 aliquots, ~8x6mm 7.8 Pancreas Pancreas 0001150 79 839 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989766 357431 0.97753 0.992247 0.856535 21110 1 76 0.00212736 113 0 6.45666e+07 0.0222852 187526 6.50711e+07 6.51006e+06 21122 3.2109e+07 0 0.120995 0.992247 0.849895 6.45666e+07 0.00305818 1.48059e+07 1.42862e+07 1.48565e+07 115 1.48849e+07 1.82121e+07 0.0025916 1.49457e+07 50.1018 0.00288186 0.994729 0 50.0854 GTEX-R55G-0426-SM-48FDH 0 B1 2 aliquots, ~2mm d. >50% of both aliquots with adipose tissue, LDACC alert 8.8 Blood Vessel Artery - Coronary 0001621 83 835 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.993296 692455 0.974859 0.994115 0.848783 23073 1 76 0.00206275 376 0 1.32095e+08 0.0247847 479940 1.32877e+08 1.01949e+07 23099 6.58329e+07 0 0.126076 0.994115 0.843788 1.32095e+08 0.00246252 2.8543e+07 1.14467e+07 2.87474e+07 352 2.86828e+07 2.67775e+07 0.00226247 2.87232e+07 50.0352 0.00361191 0.994934 0 50.1784 GTEX-R55G-0526-SM-2TC5O 1 B1 2 aliquots, ~8x6mm 9.1 Heart Heart - Left Ventricle 0006566 85 833 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.888984 144526 0.977721 0.893729 0.849752 22169 1 76 0.0027618 122 0 8.41474e+07 0.021975 1.53039e+06 9.41532e+07 1.68013e+07 22190 4.17346e+07 0 0.127969 0.893729 0.759448 8.41474e+07 0.0171606 1.8421e+07 1.06563e+07 1.8678e+07 156 1.87892e+07 1.57887e+07 0.00992297 1.8682e+07 49.8569 0.0162542 0.898473 0 50.3463 GTEX-R55G-0526-SM-2TO6S 1 B1 2 aliquots, ~8x6mm 9.1 Heart Heart - Left Ventricle 0006566 85 833 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-R55G-0626-SM-48FDB 0 B1 6 pieces, ~8x2mm. Several have up to ~1mm adherent fibroadipose tissue 7.3 Blood Vessel Artery - Aorta 0001496 88 830 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989362 329790 0.974365 0.992241 0.831288 21996 1 76 0.0019263 133 0 6.33349e+07 0.0253131 197622 6.38302e+07 6.32e+06 22015 3.14797e+07 0 0.143077 0.992241 0.824839 6.33349e+07 0.00287802 1.38536e+07 5.6142e+06 1.38684e+07 148 1.39229e+07 1.22666e+07 0.00240078 1.39788e+07 50.1001 0.00309606 0.995121 0 50.0268 GTEX-R55G-0726-SM-2TC6J 0 B1 "2 aliquots, ~9x7mm. Patchy, diffuse lymphocytic/""Hashimoto"" thyroiditis" 7.4 Thyroid Thyroid 0002046 94 824 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.393188 75638 0.952467 0.392501 0.700168 21458 1 76 0.0034391 97 0 2.41216e+07 0.0466903 129523 6.14562e+07 1.53384e+07 21475 1.18092e+07 0 0.252298 0.392501 0.274817 2.41216e+07 0.0175895 5.21845e+06 5.12669e+06 5.29061e+06 108 5.25064e+06 3.24673e+06 0.0105267 5.21712e+06 49.8399 0.00210756 0.391814 0 50.3433 GTEX-R55G-0726-SM-2TWCM 0 B1 "2 aliquots, ~9x7mm. Patchy, diffuse lymphocytic/""Hashimoto"" thyroiditis" 7.4 Thyroid Thyroid 0002046 94 824 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55G-0826-SM-2TC5U 1 B1 2 aliquots ~9x8mm. Patchy marked congestion/hemorrhage 9 Lung Lung 0008952 98 820 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.766183 184649 0.971913 0.770552 0.826856 23400 1 76 0.00308009 113 0 6.97883e+07 0.0276965 354431 9.05692e+07 1.87918e+07 23424 3.45481e+07 0 0.145057 0.770552 0.637135 6.97883e+07 0.0172105 1.53774e+07 1.11762e+07 1.55717e+07 123 1.57034e+07 1.40076e+07 0.0101052 1.56129e+07 49.8554 0.00391337 0.774921 0 50.3139 GTEX-R55G-0826-SM-2TWCO 1 B1 2 aliquots ~9x8mm. Patchy marked congestion/hemorrhage 9 Lung Lung 0008952 98 820 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55G-0926-SM-48FDN 0 B1 6 pieces, ~9x3mm 8.5 Esophagus Esophagus - Muscularis 0004648 107 811 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990528 350066 0.974202 0.992862 0.828566 21400 1 76 0.00191268 139 0 6.39856e+07 0.0255331 540522 6.44456e+07 6.49122e+06 21416 3.18302e+07 0 0.145636 0.992862 0.822652 6.39856e+07 0.00279213 1.38638e+07 6.02510e+06 1.38982e+07 157 1.38862e+07 1.08357e+07 0.00235137 1.40198e+07 50.2394 0.00838726 0.995196 0 50.0619 GTEX-R55G-1026-SM-48FDI 0 B1 6 pieces, ~7x2mm. Squamous mucosa is ~20% of thickness. Numerous mucosal mucus glands noted. 9.3 Esophagus Esophagus - Mucosa 0006920 112 806 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988335 419477 0.975592 0.991551 0.838911 21442 1 76 0.00201433 151 0 6.8148e+07 0.0241565 375414 6.87287e+07 6.99502e+06 21455 3.38755e+07 0 0.136681 0.991551 0.831823 6.8148e+07 0.00289967 1.52537e+07 1.03073e+07 1.52512e+07 159 1.53133e+07 1.40315e+07 0.00245557 1.54098e+07 50.157 0.00546226 0.994766 0 49.996 GTEX-R55G-1126-SM-48FDG 1 B1 6 pieces, ~9x4mm. Mucosa extremely well preserved, ~25% of thickness 8.6 Stomach Stomach 0000945 116 802 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991772 267097 0.977782 0.993697 0.832838 21001 1 76 0.00182738 127 0 5.5964e+07 0.0219429 275341 5.6319e+07 5.49405e+06 21009 2.78493e+07 0 0.144944 0.993697 0.827589 5.5964e+07 0.00268944 1.23791e+07 4.94456e+06 1.24172e+07 139 1.24183e+07 1.01322e+07 0.00225757 1.2484e+07 50.132 0.00488895 0.995622 0 50.0768 GTEX-R55G-1226-SM-48FDC 1 B1 6 pieces, ~9x3mm. Mucosa well preserved, ~10-15% of thickness 8.2 Colon Colon - Transverse 0001157 122 796 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991225 314765 0.973534 0.993079 0.823706 22700 1 76 0.00207675 179 0 7.13581e+07 0.0257947 1.06788e+06 7.18554e+07 7.07343e+06 22717 3.55009e+07 0 0.149828 0.993079 0.818006 7.13581e+07 0.00280496 1.59539e+07 8.05268e+06 1.59102e+07 187 1.58982e+07 1.1462e+07 0.00244018 1.60922e+07 50.3033 0.0148616 0.994934 0 49.9313 GTEX-R55G-1526-SM-48FER 0 B1 2 aliquots, ~9x6mm. Prominent corpora albicantia, no visible oocytes noted 7.4 Ovary Ovary 0000992 138 780 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991339 393618 0.972181 0.99339 0.827584 22100 1 76 0.0019155 153 0 7.0333e+07 0.0275576 276734 7.0801e+07 7.08912e+06 22116 3.49875e+07 0 0.144597 0.99339 0.822113 7.0333e+07 0.00266697 1.52135e+07 6.6006e+06 1.52666e+07 172 1.52516e+07 1.25692e+07 0.00229046 1.53714e+07 50.1956 0.00390862 0.99544 0 50.0872 GTEX-R55G-1626-SM-48FF4 1 B1 2 aliquots, ~9x9mm. Well preserved 7x2mm (aggregate) proliferative phase pattern endometrium 8.8 Uterus Uterus 0000995 147 771 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991705 544885 0.974525 0.993637 0.840867 21852 1 76 0.00183463 165 0 7.73923e+07 0.0251583 130816 7.78879e+07 7.4751e+06 21872 3.85151e+07 0 0.133659 0.993637 0.835516 7.73923e+07 0.00267448 1.68634e+07 7.12993e+06 1.6945e+07 182 1.69336e+07 1.56374e+07 0.00225374 1.70248e+07 50.1343 0.00167954 0.995568 0 50.1206 GTEX-R55G-2126-SM-2TC67 0 B1 2 aliquots, ~2mm d peripheral nerve, no artery present. May be retained for study as nerve after re-labeling 7 Nerve Nerve - Tibial 0001323 185 733 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.897733 124006 0.972771 0.902052 0.818438 23467 1 76 0.00305692 147 0 8.34766e+07 0.0269238 279244 9.25408e+07 1.79543e+07 23497 4.13493e+07 0 0.154333 0.902052 0.738274 8.34766e+07 0.0158311 1.82819e+07 9.14363e+06 1.84649e+07 160 1.85683e+07 1.45553e+07 0.00941341 1.85432e+07 49.9662 0.00301752 0.906371 0 50.249 GTEX-R55G-2126-SM-2TWB4 0 B1 2 aliquots, ~2mm d peripheral nerve, no artery present. May be retained for study as nerve after re-labeling 7 Nerve Nerve - Tibial 0001323 185 733 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55G-2326-SM-2TC61 0 B1 2 aliquots, ~10x7mm, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 187 731 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.551809 73351 0.975766 0.554621 0.869528 18589 1 76 0.002809 98 0 4.15058e+07 0.0240208 537073 7.48364e+07 1.96552e+07 18594 2.05557e+07 0 0.106238 0.554621 0.482259 4.15058e+07 0.0165942 9.14396e+06 5.35155e+06 9.32054e+06 104 9.38994e+06 7.66208e+06 0.00966663 9.25952e+06 49.6503 0.00717663 0.557434 0 50.4782 GTEX-R55G-2326-SM-2TWC5 0 B1 2 aliquots, ~10x7mm, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 187 731 BP-22238 RNA isolation_PAXgene Tissue miRNA 02/07/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-R55G-2426-SM-2TC5I 0 B1 2 aliquots, ~9x7mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 188 730 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.607804 205774 0.959523 0.611144 0.789782 20921 1 76 0.00310057 101 0 4.46249e+07 0.0401424 322950 7.30187e+07 1.65954e+07 20932 2.20526e+07 0 0.169741 0.611144 0.48267 4.46249e+07 0.0173069 9.62491e+06 1.17079e+07 9.76168e+06 107 9.83918e+06 7.13825e+06 0.0101649 9.76953e+06 49.8224 0.00442284 0.614484 0 50.3527 GTEX-R55G-2526-SM-2TC6D 0 B1 6 pieces ~8x2mm. Squamous epithelium is 2-3% of thickness 7 Skin Skin - Sun Exposed (Lower leg) 0004264 189 729 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.611802 100851 0.963492 0.615955 0.761104 23145 1 76 0.00315595 126 0 4.9369e+07 0.0362915 381090 8.01504e+07 1.79649e+07 23166 2.43626e+07 0 0.202388 0.615955 0.468806 4.9369e+07 0.018093 1.0665e+07 7.58895e+06 1.07914e+07 108 1.09032e+07 7.59906e+06 0.0105741 1.0854e+07 49.887 0.00475469 0.620108 0 50.2946 GTEX-REY6-0004-SM-2RXEZ C1 Blood Whole Blood 0013756 253 BP-21251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762436038_R01C01 GTEX-REY6-0004-SM-2XK3B C1 Blood Whole Blood 0013756 253 BP-21251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R02C02 GTEX-REY6-0004-SM-3UZFS C1 Blood Whole Blood 0013756 253 BP-21251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-REY6-0004-SM-5URD2 C1 Blood Whole Blood 0013756 253 BP-21251 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/09/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-REY6-0005-SM-2TF54 C1 9.1 Blood Whole Blood 0013756 253 BP-21312 RNA isolation_PAXgene Blood RNA (Manual) 01/11/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.892388 2.87443e+06 0.855762 0.896458 0.626499 19676 1 76 0.0027998 106 0 9.68444e+07 0.143279 324628 1.0803e+08 1.02272e+07 19706 4.792e+07 0 0.229263 0.896458 0.56163 9.68444e+07 0.00409659 1.88405e+07 1.84476e+08 1.98636e+07 141 1.99803e+07 1.59387e+07 0.00344525 1.91856e+07 48.9854 0.00300498 0.900528 0 51.3217 GTEX-REY6-0005-SM-2TO6X C1 9.1 Blood Whole Blood 0013756 253 BP-21312 RNA isolation_PAXgene Blood RNA (Manual) 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0126-SM-48FDT 1 C1 2 pieces, 8x5 & 7x7 mm; spermatogenesis 7.1 Testis Testis 0000473 270 1010 BP-21546 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987461 567417 0.91318 0.989605 0.713425 32340 1 76 0.00213161 154 0 7.26017e+07 0.0864451 639539 7.33643e+07 7.4524e+06 32387 3.61191e+07 0 0.199755 0.989605 0.706009 7.26017e+07 0.00280306 1.4798e+07 1.89286e+07 1.48334e+07 143 1.49097e+07 1.22018e+07 0.00246661 1.487e+07 49.9333 0.00871731 0.99175 0 50.0596 GTEX-REY6-0326-SM-2TF5A 1 C1 2 pieces, 9x4 & 8x5 mm 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 283 998 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.86647 212014 0.970977 0.870036 0.796976 22227 1 76 0.00235935 189 0 8.08451e+07 0.0286974 440380 9.29216e+07 8.49908e+06 22257 4.00236e+07 0 0.174001 0.870036 0.693398 8.08451e+07 0.00350117 1.7575e+07 9.87335e+06 1.79819e+07 203 1.80494e+07 1.29905e+07 0.00292792 1.78194e+07 49.6794 0.00473926 0.873602 0 50.5721 GTEX-REY6-0426-SM-2TF5G 1 C1 pieces ; patchy alveolar dilatation; focal bronchial hemorrhage 7.2 Lung Lung 0008952 285 999 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.251204 49233 0.963346 0.249662 0.715475 20214 1 76 0.00274408 98 0 2.00558e+07 0.0356341 98075 8.03318e+07 9.98173e+06 20220 9.69098e+06 0 0.247872 0.249662 0.178627 2.00558e+07 0.00672527 4.38069e+06 2.94733e+06 4.50582e+06 109 4.43624e+06 2.82496e+06 0.00474697 4.35073e+06 49.5134 0.00122087 0.248121 0 50.704 GTEX-REY6-0426-SM-2TO5S 1 C1 pieces ; patchy alveolar dilatation; focal bronchial hemorrhage 7.2 Lung Lung 0008952 285 999 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0526-SM-2TF5M 1 C1 2 pieces atrophic; possible small parathyroid focus 1mm 6.8 Thyroid Thyroid 0002046 288 996 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.866762 238079 0.959426 0.871385 0.680266 24526 1 76 0.00251597 128 0 7.28358e+07 0.0402627 483603 8.35862e+07 7.24968e+06 24581 3.59859e+07 0 0.27916 0.871385 0.592773 7.28358e+07 0.00364343 1.57156e+07 8.90709e+06 1.59095e+07 152 1.6006e+07 9.00475e+06 0.00307671 1.59732e+07 49.9488 0.00578568 0.876008 0 50.3066 GTEX-REY6-0526-SM-2TO71 1 C1 2 pieces atrophic; possible small parathyroid focus 1mm 6.8 Thyroid Thyroid 0002046 288 996 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0626-SM-2TF4G 1 C1 2 pieces, 6x3 & 5x3 mm; ~20% adipose intermixed and at periphery 7.2 Nerve Nerve - Tibial 0001323 290 995 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.932687 634190 0.964158 0.938661 0.718275 23419 1 76 0.00267565 143 0 6.8333e+07 0.0355738 327737 7.27984e+07 6.54524e+06 23466 3.37083e+07 0 0.245884 0.938661 0.674216 6.8333e+07 0.00403393 1.48322e+07 6.88981e+06 1.50353e+07 153 1.51147e+07 9.64643e+06 0.00335047 1.51574e+07 50.0705 0.00450198 0.944635 0 50.34 GTEX-REY6-0626-SM-2TO4G 1 C1 2 pieces, 6x3 & 5x3 mm; ~20% adipose intermixed and at periphery 7.2 Nerve Nerve - Tibial 0001323 290 995 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0726-SM-2TF4M 1 C1 2 pieces, each 2mm arteries with no sclerosis or adherent adipose [good clean specimens] 8.2 Blood Vessel Artery - Tibial 0007610 291 995 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.970133 435180 0.968825 0.974639 0.787533 21567 1 76 0.00239787 150 0 7.50449e+07 0.0308312 318486 7.69976e+07 6.27031e+06 21600 3.71209e+07 0 0.181292 0.974639 0.76756 7.50449e+07 0.00383371 1.58521e+07 6.09248e+06 1.62879e+07 178 1.62962e+07 1.27462e+07 0.00311247 1.61624e+07 49.7938 0.00413631 0.979144 0 50.678 GTEX-REY6-0726-SM-2TO4O 1 C1 2 pieces, each 2mm arteries with no sclerosis or adherent adipose [good clean specimens] 8.2 Blood Vessel Artery - Tibial 0007610 291 995 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0826-SM-2TF4S 1 C1 2 pieces 9x5 & 7x6 mm; minimal adipose 8 Muscle Muscle - Skeletal 0011907 293 994 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.84773 125365 0.976412 0.850122 0.838654 20018 1 76 0.00205828 156 0 8.24357e+07 0.0233199 820332 9.69693e+07 9.21891e+06 20043 4.08595e+07 0 0.137758 0.850122 0.712958 8.24357e+07 0.00328457 1.70111e+07 9.9221e+06 1.78254e+07 198 1.77795e+07 1.54786e+07 0.0026697 1.725e+07 49.2442 0.00845971 0.852514 0 51.1686 GTEX-REY6-0826-SM-2TO4M 1 C1 2 pieces 9x5 & 7x6 mm; minimal adipose 8 Muscle Muscle - Skeletal 0011907 293 994 BP-21547 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-0926-SM-48FDA 1 C1 2 pieces 1-2mm arteries with 50% surrounding adipose; small plaque 5.8 Blood Vessel Artery - Coronary 0001621 295 992 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988036 230663 0.972001 0.990574 0.803028 22001 1 76 0.00215034 130 0 6.30874e+07 0.0276914 400721 6.36877e+07 6.42176e+06 22027 3.13519e+07 0 0.168974 0.990574 0.795458 6.30874e+07 0.00300819 1.37288e+07 6.30437e+06 1.37738e+07 152 1.3789e+07 1.0242e+07 0.00257817 1.38712e+07 50.1486 0.00629197 0.993111 0 50.0818 GTEX-REY6-1026-SM-2TF4Y 1 C1 2 pieces, 9x6 & 7x7 mm; no sign of hypertrophy or ischemia 6.3 Heart Heart - Left Ventricle 0006566 298 991 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.90411 194483 0.973427 0.90722 0.827277 21634 1 76 0.00221392 263 0 8.37553e+07 0.0264145 3.85459e+06 9.23207e+07 8.56331e+06 21659 4.14845e+07 0 0.14615 0.90722 0.750522 8.37553e+07 0.00340794 1.82068e+07 1.3804e+07 1.90161e+07 330 1.88874e+07 8.53282e+06 0.00280888 1.85553e+07 49.5566 0.0417522 0.91033 0 51.0871 GTEX-REY6-1026-SM-2TO6G 1 C1 2 pieces, 9x6 & 7x7 mm; no sign of hypertrophy or ischemia 6.3 Heart Heart - Left Ventricle 0006566 298 991 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-REY6-1126-SM-48FDU 1 C1 6 pieces up to 8x1.6 mm; minimal plaques 7.5 Blood Vessel Artery - Aorta 0001496 300 990 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990661 285018 0.972942 0.992513 0.791825 21999 1 76 0.00214724 119 0 5.76573e+07 0.0267248 260730 5.80923e+07 5.48447e+06 22016 2.86715e+07 0 0.181116 0.992513 0.785897 5.76573e+07 0.00295588 1.25073e+07 5.37671e+06 1.2537e+07 133 1.25577e+07 1.01046e+07 0.00255081 1.25934e+07 50.0709 0.00448821 0.994365 0 50.0593 GTEX-REY6-1226-SM-48FDR 1 C1 2 pieces, 8x7 & 7x6 mm; no congestion 6.2 Liver Liver 0001114 304 986 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989712 336608 0.978182 0.99175 0.840042 20698 1 76 0.00201131 163 0 7.20296e+07 0.0215869 155976 7.26287e+07 6.98865e+06 20715 3.58293e+07 0 0.13814 0.99175 0.833112 7.20296e+07 0.00286507 1.58979e+07 9.00551e+06 1.59006e+07 194 1.58879e+07 1.17653e+07 0.00243731 1.60526e+07 50.2578 0.00214758 0.993789 0 50.0044 GTEX-REY6-1326-SM-48FDO 0 C1 6 pieces up to 6.7x2.5 mm; well preserved, well cut 8.7 Esophagus Esophagus - Mucosa 0006920 306 985 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990457 298566 0.971745 0.992759 0.7936 22164 1 76 0.00219973 120 0 5.93543e+07 0.0280299 291608 5.97872e+07 5.94815e+06 22184 2.95279e+07 0 0.178145 0.992759 0.787854 5.93543e+07 0.0030827 1.32092e+07 8.82582e+06 1.32307e+07 130 1.32601e+07 1.12483e+07 0.00264019 1.33161e+07 50.1053 0.00487743 0.995062 0 50.0406 GTEX-REY6-1426-SM-48FDK 1 C1 6 pieces, up to 7.5x2 mm; 7.7 Esophagus Esophagus - Muscularis 0004648 308 984 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.98881 307206 0.972586 0.991701 0.794777 22373 1 76 0.00209397 136 0 6.92294e+07 0.0271509 461846 6.98088e+07 7.23541e+06 22399 3.44084e+07 0 0.177809 0.991701 0.788181 6.92294e+07 0.00291242 1.49951e+07 6.51188e+06 1.50167e+07 158 1.50605e+07 1.17756e+07 0.002502 1.51437e+07 50.1376 0.00661587 0.994591 0 50.0359 GTEX-REY6-1726-SM-48FDL 2 C1 2 pieces 10x4&9x5 mm; 1 has 25% adipose 6.8 Adrenal Gland Adrenal Gland 0002369 316 978 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057,LCSET-3181 05/26/2013 TruSeq.v1 RNASEQ 0.9895 369573 0.967913 0.99116 0.775934 22041 1 76 0.00206264 132 0 6.20295e+07 0.0318725 1.61626e+06 6.25828e+07 5.46916e+06 22062 3.0854e+07 0 0.191979 0.99116 0.769075 6.20295e+07 0.00287288 1.35009e+07 9.79123e+06 1.35134e+07 156 1.35273e+07 8.01641e+06 0.00246709 1.35895e+07 50.1147 0.0258259 0.99282 0 50.0232 GTEX-REY6-1826-SM-EAZAT 1 C1 6 pieces, up to 7x3 mm; 5 are cortex, 1 is medulla; 5.5 Kidney Kidney - Cortex 0001225 319 976 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.991822 175419 0.975614 0.992758 0.8253 21203 1 76 0.00175208 194 0 6.4491e+07 0.024266 3.39998e+06 6.49615e+07 4.6386e+06 21213 3.21591e+07 0 0.150314 0.992758 0.819323 6.4491e+07 0.00255497 1.41573e+07 1.88325e+07 1.44142e+07 240 1.43494e+07 5.26826e+06 0.00215315 1.42707e+07 49.8626 0.0523383 0.993694 0 50.4496 GTEX-REY6-2126-SM-48FD9 2 C1 2 pieces, 9x7 & 9x8 mm; glandular hyperplasia 7.1 Prostate Prostate 0002367 329 968 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988853 310779 0.960055 0.991026 0.725206 24474 1 76 0.00231595 121 0 6.07289e+07 0.0396048 338103 6.12788e+07 6.01268e+06 24504 3.01876e+07 0 0.23485 0.991026 0.718697 6.07289e+07 0.00321849 1.32033e+07 7.84753e+06 1.32998e+07 135 1.33172e+07 8.54029e+06 0.00276623 1.33178e+07 50.0013 0.00551745 0.993199 0 50.1821 GTEX-REY6-2426-SM-48FF5 1 C1 2 pieces, 8x8 & 8x7 mm; all adipose tissue; no mammary ducts 7.2 Breast Breast - Mammary Tissue 0008367 335 964 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992209 426905 0.979206 0.993751 0.81572 22114 1 76 0.00198526 203 0 8.5745e+07 0.0204885 519164 8.62842e+07 8.21315e+06 22138 4.26872e+07 0 0.163486 0.993751 0.810623 8.5745e+07 0.00261744 1.90442e+07 9.20670e+06 1.90368e+07 248 1.90657e+07 1.47977e+07 0.00230086 1.91427e+07 50.1008 0.00601691 0.995293 0 49.9903 GTEX-RM2N-0002-SM-2RXEV B1 Blood Whole Blood 0013756 -225 BP-21336 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/11/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428098_R03C01 GTEX-RM2N-0002-SM-2XK37 B1 Blood Whole Blood 0013756 -225 BP-21336 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/11/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R06C02 GTEX-RM2N-0002-SM-4X62E B1 Blood Whole Blood 0013756 -225 BP-21336 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/11/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-RM2N-0002-SM-5SOEB B1 Blood Whole Blood 0013756 -225 BP-21336 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/11/2012 LCSET-5226,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RM2N-0006-SM-2TF5H B1 7.8 Blood Whole Blood 0013756 -225 BP-21312 RNA isolation_PAXgene Blood RNA (Manual) 01/11/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.561648 629790 0.881193 0.559328 0.66326 18337 1 76 0.00272456 97 0 4.39896e+07 0.118253 119173 7.86471e+07 9.97696e+06 18354 2.16432e+07 0 0.217932 0.559328 0.37098 4.39896e+07 0.00480473 8.75185e+06 4.88786e+07 9.18493e+06 111 9.07609e+06 6.7846e+06 0.00376896 8.69462e+06 48.9267 0.00151529 0.557008 0 51.2072 GTEX-RM2N-0006-SM-2TO4R B1 7.8 Blood Whole Blood 0013756 -225 BP-21312 RNA isolation_PAXgene Blood RNA (Manual) 01/11/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-0008-SM-48FF3 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 227 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.99312 532336 0.979849 0.99481 0.890558 19099 1 76 0.00167261 145 0 6.67078e+07 0.0198336 199677 6.70557e+07 6.36582e+06 19105 3.32174e+07 0 0.0892907 0.99481 0.885937 6.67078e+07 0.00229452 1.49335e+07 9.87046e+06 1.49482e+07 148 1.49785e+07 1.80881e+07 0.00198304 1.502e+07 50.0692 0.00297778 0.996501 0 50.0245 GTEX-RM2N-0126-SM-48FDD 1 B1 2 aliquots, ~11x6mm 8.7 Adrenal Gland Adrenal Gland 0002369 110 1137 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989775 351484 0.977394 0.99279 0.843938 21291 1 76 0.00201706 133 0 6.12418e+07 0.0222741 1.34339e+06 6.16866e+07 6.1442e+06 21312 3.04373e+07 0 0.133456 0.99279 0.837853 6.12418e+07 0.00284365 1.36511e+07 6.82466e+06 1.35774e+07 155 1.36062e+07 1.03591e+07 0.0024291 1.37944e+07 50.3435 0.0217777 0.995805 0 49.8648 GTEX-RM2N-0326-SM-48FD8 1 B1 2 aliquots ~10x6mm, remarkably well-preserved 6.4 Pancreas Pancreas 0001150 119 1128 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989632 226715 0.976999 0.991786 0.841648 20239 1 76 0.00226242 97 0 6.05727e+07 0.0227824 287576 6.10744e+07 6.14986e+06 20250 3.0142e+07 0 0.135351 0.991786 0.834734 6.05727e+07 0.00313637 1.39634e+07 2.10536e+07 1.40637e+07 110 1.40466e+07 1.74462e+07 0.00269844 1.41165e+07 50.1242 0.00470862 0.99394 0 50.1789 GTEX-RM2N-0426-SM-2TF4T 1 B1 2 aliquots, ~12x6mm, minimal congestion, well - preserved 7.5 Lung Lung 0008952 122 1125 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.944308 130573 0.971349 0.945287 0.802315 24281 1 76 0.00235653 275 0 9.4e+07 0.0282467 600205 9.94407e+07 8.13205e+06 24327 4.67088e+07 0 0.169033 0.945287 0.758418 9.4e+07 0.00331734 2.07118e+07 8.51611e+06 2.10084e+07 267 2.09319e+07 1.56704e+07 0.00283644 2.08762e+07 49.9334 0.00603581 0.946265 0 50.3555 GTEX-RM2N-0426-SM-2TO75 1 B1 2 aliquots, ~12x6mm, minimal congestion, well - preserved 7.5 Lung Lung 0008952 122 1125 BP-21548 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-0526-SM-2TF4N 1 B1 2 aliquots, ~10x6mm. Small parathyroid gland fragment, 2mm on one edge. Focal lymphocytic thyroiditis 7.1 Thyroid Thyroid 0002046 137 1110 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.780236 144515 0.961508 0.781452 0.725238 23887 1 76 0.00229711 138 0 7.18968e+07 0.0382062 446435 9.20041e+07 8.52409e+06 23934 3.56093e+07 0 0.236271 0.781452 0.566739 7.18968e+07 0.00364004 1.56267e+07 8.54333e+06 1.58367e+07 158 1.57631e+07 1.01482e+07 0.00296753 1.57994e+07 50.0576 0.00485234 0.782669 0 50.3337 GTEX-RM2N-0526-SM-2TO66 1 B1 2 aliquots, ~10x6mm. Small parathyroid gland fragment, 2mm on one edge. Focal lymphocytic thyroiditis 7.1 Thyroid Thyroid 0002046 137 1110 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-0626-SM-48FD6 0 B1 6 pieces, ~8x5mm 8.2 Esophagus Esophagus - Muscularis 0004648 143 1104 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990431 339496 0.974712 0.993123 0.840534 22280 1 76 0.0019545 174 0 7.77182e+07 0.0249953 673130 7.82563e+07 8.0476e+06 22300 3.86518e+07 0 0.134178 0.993123 0.834754 7.77182e+07 0.00285789 1.6732e+07 6.71091e+06 1.67562e+07 199 1.67642e+07 1.42397e+07 0.00240497 1.69176e+07 50.2277 0.00860161 0.995816 0 50.036 GTEX-RM2N-0726-SM-48FD5 0 B1 6 pieces, 6x1.5mm. Squamous mucosa is ~20-30% of thickness 9.2 Esophagus Esophagus - Mucosa 0006920 145 1102 BP-21549 RNA isolation_PAXgene Tissue miRNA 01/18/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990992 367220 0.974399 0.992964 0.838828 22170 1 76 0.00204822 147 0 6.87763e+07 0.0252125 405192 6.92636e+07 6.75449e+06 22187 3.42279e+07 0 0.135571 0.992964 0.832926 6.87763e+07 0.00281538 1.54163e+07 1.02769e+07 1.54116e+07 157 1.54442e+07 1.41883e+07 0.00243104 1.55185e+07 50.1199 0.00585 0.994937 0 49.9924 GTEX-RM2N-0826-SM-48FD3 1 B1 6 pieces, 7.5x1.5mm. Mucosa extremely well-preserved, 40-50% of thickness 7.4 Stomach Stomach 0000945 150 1097 BP-21575 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.980391 234832 0.983632 0.983402 0.859928 21450 1 76 0.00192162 301 0 7.29345e+07 0.0157784 613197 7.41655e+07 7.4575e+06 21468 3.62297e+07 0 0.123704 0.983402 0.845655 7.29345e+07 0.00274652 1.68467e+07 9.38625e+07 1.72247e+07 212 1.73407e+07 2.15531e+07 0.00233281 1.6957e+07 49.4407 0.00826796 0.986414 0 50.5548 GTEX-RM2N-0926-SM-48FD1 1 B1 6 pieces, ~6x1.2mm. Mucosa moderately well preserved, ~30% of thickness 8 Colon Colon - Transverse 0001157 158 1089 BP-21575 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988529 372541 0.970305 0.991291 0.781115 23130 1 76 0.0023625 155 0 6.42614e+07 0.0286224 1.16791e+06 6.4826e+07 6.52001e+06 23161 3.1918e+07 0 0.18919 0.991291 0.774312 6.42614e+07 0.00313567 1.43228e+07 8.3013e+06 1.4266e+07 155 1.42753e+07 9.18123e+06 0.00274801 1.44794e+07 50.3549 0.018016 0.994053 0 49.9007 GTEX-RM2N-1126-SM-48FCY 1 B1 2 ~9x6.5mm aliquots, patchy glandular/stroma hyperplasia 6.2 Prostate Prostate 0002367 174 1073 BP-21575 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989213 342169 0.964147 0.991452 0.73798 24458 1 76 0.00211534 155 0 7.73104e+07 0.0356446 484837 7.7977e+07 7.61449e+06 24502 3.84491e+07 0 0.226167 0.991452 0.731672 7.73104e+07 0.00283119 1.67986e+07 8.25326e+06 1.68667e+07 177 1.6886e+07 1.06399e+07 0.00247246 1.69486e+07 50.0926 0.00621769 0.99369 0 50.1011 GTEX-RM2N-1326-SM-48FCW 1 B1 2 aliquots ~11x6mm. Spermatogenesis reduced but present 7.1 Testis Testis 0000473 190 1057 BP-21575 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990201 411383 0.928503 0.992184 0.732463 31013 1 76 0.00208984 128 0 5.87391e+07 0.0711998 591563 5.92018e+07 5.77905e+06 31056 2.92231e+07 0 0.19604 0.992184 0.726738 5.87391e+07 0.00282359 1.23419e+07 8.86743e+06 1.23269e+07 121 1.23803e+07 9.88732e+06 0.00245598 1.2398e+07 50.0357 0.00999231 0.994166 0 49.9696 GTEX-RM2N-1426-SM-2TF4H 0 B1 6 pieces, ~8.5x2mm. Squamous epithelium is 2-3% of thickness 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 227 1020 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.80566 124357 0.965686 0.80861 0.744578 24628 1 76 0.00245781 197 0 7.94879e+07 0.0341088 717023 9.83019e+07 9.6074e+06 24675 3.93661e+07 0 0.221108 0.80861 0.602073 7.94879e+07 0.00361151 1.71794e+07 7.75795e+06 1.73944e+07 182 1.74048e+07 1.15251e+07 0.00303256 1.74314e+07 50.0381 0.00729409 0.81156 0 50.311 GTEX-RM2N-1426-SM-2TO53 0 B1 6 pieces, ~8.5x2mm. Squamous epithelium is 2-3% of thickness 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 227 1020 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-1626-SM-2TF5N 0 B1 2 aliquots, ~8.5x5mm. Minimal interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 221 1026 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.663971 95921 0.974978 0.664404 0.85374 19742 1 76 0.00214448 139 0 6.0319e+07 0.0246394 873975 9.07867e+07 1.01242e+07 19754 2.97626e+07 0 0.121239 0.664404 0.567228 6.0319e+07 0.00371065 1.28891e+07 7.78432e+06 1.3321e+07 150 1.32437e+07 1.104e+07 0.00292705 1.29989e+07 49.5336 0.00962668 0.664837 0 50.8239 GTEX-RM2N-1626-SM-2TO4W 0 B1 2 aliquots, ~8.5x5mm. Minimal interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 221 1026 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-1726-SM-2TF55 0 B1 2 aliquots, ~9x7mm. 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 223 1024 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.652595 80032 0.9696 0.654134 0.758675 22269 1 76 0.00237985 119 0 5.60958e+07 0.0300857 350381 8.57558e+07 9.45917e+06 22301 2.76714e+07 0 0.210925 0.654134 0.496275 5.60958e+07 0.00388393 1.2245e+07 5.11303e+06 1.24212e+07 130 1.24065e+07 8.29301e+06 0.00313012 1.23815e+07 49.9496 0.0040858 0.655674 0 50.3572 GTEX-RM2N-1826-SM-2TF5B 0 B1 2 aliquots, ~1.5mm d. One has ~0.5mm nubbins of adherent fat. 6.9 Blood Vessel Artery - Tibial 0007610 231 1016 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.844073 111517 0.96861 0.845441 0.807593 21090 1 76 0.00232831 165 0 7.84475e+07 0.0309771 503542 9.27889e+07 8.71131e+06 21120 3.88747e+07 0 0.161017 0.845441 0.682772 7.84475e+07 0.00348137 1.67473e+07 5.67486e+06 1.70304e+07 195 1.69822e+07 1.28485e+07 0.0029039 1.69078e+07 49.8902 0.00542675 0.846809 0 50.4191 GTEX-RM2N-1826-SM-2TO4K 0 B1 2 aliquots, ~1.5mm d. One has ~0.5mm nubbins of adherent fat. 6.9 Blood Vessel Artery - Tibial 0007610 231 1016 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RM2N-1926-SM-48FCU 0 B1 2 aliquots, ~9x9mm, diffuse macrovesicular steatosis involves 80+% of parenchyma 8.9 Liver Liver 0001114 505 742 BP-21576 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.991702 319862 0.982118 0.993822 0.865486 20026 1 76 0.00212798 127 0 7.11247e+07 0.0161721 869378 7.15668e+07 7.0071e+06 20041 3.53463e+07 0 0.116632 0.993822 0.860139 7.11247e+07 0.00284461 1.55904e+07 1.0711e+07 1.54763e+07 159 1.55365e+07 1.58754e+07 0.00248553 1.56676e+07 50.2101 0.0121478 0.995943 0 49.8164 GTEX-RN5K-0001-SM-DINCK D1 Blood Whole Blood 0013756 1294 BP-21410 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-RN5K-0001-SM-DLIOT D1 Blood Whole Blood 0013756 1294 BP-21410 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-RN5K-2826-SM-EZ6L3 1 D1 2 aliquots, ~ 8x8mm 5.7 Thyroid Thyroid 0002046 1367 1296 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986448 211489 0.968082 0.987996 0.784617 23753 1 76 0.00248789 209 0 9.04337e+07 0.0316513 1.06915e+06 9.15324e+07 7.09658e+06 23785 4.50597e+07 0 0.183464 0.987996 0.775199 9.04337e+07 0.00375429 1.98528e+07 9.18864e+06 1.99301e+07 251 1.99236e+07 1.50086e+07 0.0031201 1.9997e+07 50.0919 0.0116805 0.989544 0 50.0972 GTEX-RN64-0004-SM-2MRIG C1 Blood Whole Blood 0013756 578 BP-21412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 GTEx_Batch4_OM5_Jan12 02/06/2012 Illumina OMNI SNP Array OMNI 6762321051_R04C01 GTEX-RN64-0004-SM-2XK29 C1 Blood Whole Blood 0013756 578 BP-21412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R03C02 GTEX-RN64-0004-SM-3USS7 C1 Blood Whole Blood 0013756 578 BP-21412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-RN64-0004-SM-5URBC C1 Blood Whole Blood 0013756 578 BP-21412 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/12/2012 LCSET-5270,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RN64-0005-SM-793B4 C1 8.4 Blood Whole Blood 0013756 578 BP-21432 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2012 LCSET-6376,LCSET-6778 02/19/2015 TruSeq.v1 RNASEQ 0.992466 475629 0.962309 0.99372 0.720375 20488 1 76 0.00283286 98 0 6.09637e+07 0.0371094 133802 6.1349e+07 5.04546e+06 20512 3.03539e+07 0 0.241934 0.99372 0.715851 6.09637e+07 0.00331603 1.36183e+07 3.00572e+07 1.35849e+07 114 1.3656e+07 1.08516e+07 0.00307414 1.36224e+07 49.9384 0.002181 0.994974 0 49.9387 GTEX-RN64-0006-SM-2TC6P C1 8.7 Blood Whole Blood 0013756 578 BP-21432 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2012 TruSeq.v1 EXCLUDE 0.085393 70372 0.953742 0.0855369 0.73181 17726 1 76 0.00386656 90 0 1.43273e+07 0.0387635 63136 1.67499e+08 3.92828e+07 17729 6.84954e+06 0 0.221932 0.0855369 0.0625968 1.43273e+07 0.0237318 3.1096e+06 1.12713e+07 3.24294e+06 104 3.30404e+06 2.73074e+06 0.0137825 3.14978e+06 48.8048 0.000376934 0.0856808 0 51.0495 GTEX-RN64-0006-SM-2TO5F C1 8.7 Blood Whole Blood 0013756 578 BP-21432 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-0008-SM-48FEZ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 677 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992343 443444 0.977403 0.994436 0.878374 19500 1 76 0.00179337 146 0 6.14544e+07 0.0222371 240565 6.17982e+07 6.15497e+06 19506 3.0589e+07 0 0.0990285 0.994436 0.873487 6.14544e+07 0.00248816 1.36388e+07 9.14887e+06 1.3679e+07 140 1.37134e+07 1.55374e+07 0.00214003 1.37387e+07 50.0462 0.00389275 0.99653 0 50.0736 GTEX-RN64-0126-SM-2TC68 1 C1 6 pieces, ~6.5x2mm. Squamous epithelium is ~2% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 676 1113 BP-21626 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.805717 102551 0.967627 0.811099 0.757916 25037 1 76 0.00326709 135 0 7.18251e+07 0.0321084 403594 8.85528e+07 1.6633e+07 25073 3.5529e+07 0 0.20971 0.811099 0.614745 7.18251e+07 0.0174402 1.56277e+07 8.92044e+06 1.57883e+07 124 1.59586e+07 1.1238e+07 0.0103066 1.58937e+07 49.8982 0.00455767 0.816481 0 50.2556 GTEX-RN64-0126-SM-2TO55 1 C1 6 pieces, ~6.5x2mm. Squamous epithelium is ~2% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 676 1113 BP-21626 RNA isolation_PAXgene Tissue miRNA 01/20/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-0326-SM-2TC5J 0 C1 2 aliquots, ~10x5mm, minimal interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 695 1095 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.816747 430533 0.96537 0.820992 0.847654 19881 1 76 0.00294692 104 0 7.8875e+07 0.0343657 1.13851e+06 9.60727e+07 1.84192e+07 19894 3.91062e+07 0 0.117716 0.820992 0.695917 7.8875e+07 0.0170814 1.65196e+07 2.25827e+07 1.70144e+07 138 1.70835e+07 1.52534e+07 0.00997764 1.67881e+07 49.5639 0.0118505 0.825238 0 50.7377 GTEX-RN64-0326-SM-2TO5K 0 C1 2 aliquots, ~10x5mm, minimal interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 695 1095 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-0526-SM-2TC5P 0 C1 2 aliquots, 2.5mm d. Good clean specimens 8.1 Blood Vessel Artery - Tibial 0007610 708 1085 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.683194 83433 0.970863 0.688178 0.802532 22264 1 76 0.00317661 115 0 6.30988e+07 0.0286931 272411 9.16897e+07 1.84512e+07 22288 3.11643e+07 0 0.168331 0.688178 0.552284 6.30988e+07 0.0171578 1.33881e+07 6.03516e+06 1.35861e+07 110 1.37463e+07 1.14396e+07 0.0101166 1.36358e+07 49.7982 0.00297101 0.693161 0 50.3671 GTEX-RN64-0526-SM-2TO4V 0 C1 2 aliquots, 2.5mm d. Good clean specimens 8.1 Blood Vessel Artery - Tibial 0007610 708 1085 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-0626-SM-2TC5V 1 C1 2 aliquots, ~8x6mm. Patchy regressive changes 6.2 Thyroid Thyroid 0002046 748 1048 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.8934 354616 0.94947 0.898351 0.731563 25427 1 76 0.00337478 128 0 8.70646e+07 0.0502331 547237 9.6916e+07 1.81125e+07 25468 4.31223e+07 0 0.217908 0.898351 0.6572 8.70646e+07 0.0166678 1.8612e+07 1.94861e+07 1.87357e+07 145 1.88928e+07 1.2736e+07 0.00998464 1.8884e+07 49.9883 0.00564651 0.903301 0 50.1655 GTEX-RN64-0626-SM-2TO65 1 C1 2 aliquots, ~8x6mm. Patchy regressive changes 6.2 Thyroid Thyroid 0002046 748 1048 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-0726-SM-48FCV 1 C1 2 aliquots, 2.5x1mm. LDACC ALERT both have ~4x2mm adherent nubbins of fat on one edge 6 Blood Vessel Artery - Coronary 0001621 762 1041 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987985 231751 0.965815 0.990004 0.738047 22489 1 76 0.00246194 122 0 5.95647e+07 0.0338547 172258 6.01661e+07 5.94678e+06 22525 2.9594e+07 0 0.227768 0.990004 0.73067 5.95647e+07 0.00329438 1.27979e+07 5.39973e+06 1.28474e+07 132 1.28674e+07 8.88349e+06 0.00287731 1.2897e+07 50.0575 0.00286304 0.992024 0 50.0966 GTEX-RN64-0826-SM-2TC62 1 C1 2 aliquots, ~8x6mm 6.5 Heart Heart - Left Ventricle 0006566 764 1040 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.663349 315563 0.971068 0.666968 0.844553 20140 1 76 0.00358433 107 0 6.98232e+07 0.0287669 4.30222e+06 1.04688e+08 2.30853e+07 20150 3.4543e+07 0 0.126515 0.666968 0.563289 6.98232e+07 0.0179001 1.51943e+07 2.63821e+07 1.56875e+07 159 1.5664e+07 3.34294e+06 0.0107034 1.53612e+07 49.512 0.0410958 0.670586 0 50.7986 GTEX-RN64-0826-SM-2TO5W 1 C1 2 aliquots, ~8x6mm 6.5 Heart Heart - Left Ventricle 0006566 764 1040 BP-21577 RNA isolation_PAXgene Tissue miRNA 01/19/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-1026-SM-48FDX 1 C1 6 pieces ~7x1mm. Squamous mucosa, well preserved, is ~40-50% of thickness 7.6 Esophagus Esophagus - Mucosa 0006920 767 1039 BP-21626 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989213 279124 0.968944 0.991249 0.80384 21113 1 76 0.0021905 120 0 5.80516e+07 0.0308217 637661 5.85641e+07 5.67818e+06 21126 2.88841e+07 0 0.165104 0.991249 0.796806 5.80516e+07 0.00312148 1.29753e+07 9.5446e+06 1.29798e+07 144 1.299e+07 8.6655e+06 0.00265503 1.30842e+07 50.1806 0.0108883 0.993285 0 50.0087 GTEX-RN64-1226-SM-2TC6E 2 C1 2 aliquots, ~ 7.5x7.5mm, badly autolyzed, moderate congestion 6.6 Lung Lung 0008952 771 1036 BP-21626 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-1477 05/27/2012 TruSeq.v1 RNASEQ 0.580488 192513 0.964435 0.584905 0.689269 23581 1 76 0.00359253 97 0 5.44199e+07 0.0351359 498970 9.30405e+07 2.06289e+07 23612 2.6856e+07 0 0.275166 0.584905 0.403157 5.44199e+07 0.0179873 1.1877e+07 1.256e+07 1.20249e+07 108 1.21783e+07 6.58553e+06 0.0107356 1.2106e+07 49.8511 0.00536293 0.589323 0 50.3094 GTEX-RN64-1226-SM-2TO5D 2 C1 2 aliquots, ~ 7.5x7.5mm, badly autolyzed, moderate congestion 6.6 Lung Lung 0008952 771 1036 BP-21626 RNA isolation_PAXgene Tissue miRNA 01/20/2012 GTEX_Affy_Batch6_Apr12 05/01/2012 Affymetrix Expression EXCLUDE GTEX-RN64-1626-SM-48FD7 2 C1 2 aliquots, ~8.5x8mm. All cortex, may be used when re-labled as cortex. Tubules autolyzed, crystalloid deposits in tubular lumina 6.6 Kidney Kidney - Cortex 0001225 780 1032 BP-21627 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057,LCSET-3181 05/26/2013 TruSeq.v1 RNASEQ 0.989199 397118 0.954641 0.990906 0.710672 25494 1 76 0.00231358 137 0 7.39282e+07 0.0451078 565565 7.46067e+07 6.58764e+06 25540 3.67482e+07 0 0.243968 0.990906 0.704209 7.39282e+07 0.00304846 1.5961e+07 9.54882e+06 1.6048e+07 160 1.61013e+07 9.75871e+06 0.00268038 1.60389e+07 49.9028 0.00758062 0.992612 0 50.1358 GTEX-RN64-1826-SM-48FDV 1 C1 2 aliquots, ~8x6mm, moderate congestion 6.4 Liver Liver 0001114 784 1030 BP-21627 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989528 250885 0.961201 0.991895 0.773695 20974 1 76 0.002463 108 0 5.63344e+07 0.0386608 871201 5.67948e+07 5.73771e+06 20994 2.80158e+07 0 0.187506 0.991895 0.767424 5.63344e+07 0.00327444 1.22629e+07 8.83548e+06 1.21843e+07 138 1.21573e+07 6.93686e+06 0.00286775 1.2415e+07 50.5245 0.0153395 0.994262 0 49.8393 GTEX-RN64-2326-SM-48FDW 1 C1 2 aliquots, ~8x7mm. Spermatogenesis appears arrested 6.4 Testis Testis 0000473 794 1025 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988431 365260 0.932736 0.990717 0.720027 30924 1 76 0.00235183 126 0 6.24383e+07 0.0670454 976349 6.30233e+07 6.43259e+06 30966 3.10477e+07 0 0.21271 0.990717 0.713342 6.24383e+07 0.00306208 1.32345e+07 9.12161e+06 1.32449e+07 138 1.32831e+07 8.31319e+06 0.00270613 1.33295e+07 50.0872 0.0154919 0.993003 0 50.0196 GTEX-RN64-2426-SM-EZ6L2 3 C1 6 pieces ~6x4mm. All detrusor muscle: Urothelium completely autolyzed/sloughed 5.7 Bladder Bladder 0001255 796 1023 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.989997 181979 0.966113 0.991408 0.811993 23987 1 76 0.00262042 272 0 9.02987e+07 0.0336965 1.0074e+06 9.10813e+07 6.61675e+06 24011 4.49852e+07 0 0.15412 0.991408 0.805016 9.02987e+07 0.00389452 1.93657e+07 8.43967e+06 1.95324e+07 307 1.94387e+07 1.23254e+07 0.00325656 1.95828e+07 50.1847 0.0110605 0.99282 0 50.2143 GTEX-RNOR-0001-SM-2RXF2 C1 Blood Whole Blood 0013756 680 BP-21434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762436038_R02C01 GTEX-RNOR-0001-SM-2XK2U C1 Blood Whole Blood 0013756 680 BP-21434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R05C02 GTEX-RNOR-0001-SM-3UZFO C1 Blood Whole Blood 0013756 680 BP-21434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-RNOR-0001-SM-5URCF C1 Blood Whole Blood 0013756 680 BP-21434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/13/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RNOR-0005-SM-2TF4Z C1 7.5 Blood Whole Blood 0013756 680 BP-21432 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.728278 1.46034e+06 0.864313 0.728558 0.641594 19371 1 76 0.00290885 108 0 5.90063e+07 0.134903 315082 8.09905e+07 9.42369e+06 19391 2.91885e+07 0 0.222719 0.728558 0.467438 5.90063e+07 0.00469553 1.15636e+07 1.03761e+08 1.23588e+07 119 1.2297e+07 9.61038e+06 0.00380185 1.16856e+07 48.7254 0.00389036 0.728837 0 51.662 GTEX-RNOR-0005-SM-2TWBH C1 7.5 Blood Whole Blood 0013756 680 BP-21432 RNA isolation_PAXgene Blood RNA (Manual) 01/13/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0008-SM-48FEY C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 825 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.990298 536688 0.979737 0.993315 0.877408 20073 1 76 0.0018299 157 0 7.27979e+07 0.01995 407540 7.32878e+07 7.30627e+06 20080 3.61993e+07 0 0.102329 0.993315 0.871542 7.27979e+07 0.00258005 1.62378e+07 9.99968e+06 1.63029e+07 158 1.63736e+07 1.89469e+07 0.00220384 1.63909e+07 50.0264 0.00556082 0.996332 0 50.1001 GTEX-RNOR-0011-R1A-SM-2TF5D C1, A1 6.3 Brain Brain - Hippocampus 0001954 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.196526 101708 0.93836 0.194168 0.80868 18769 1 76 0.00292355 98 0 1.49652e+07 0.0611406 659018 7.70736e+07 1.24937e+07 18772 7.1692e+06 0 0.12968 0.194168 0.15702 1.49652e+07 0.0082298 3.20542e+06 5.68784e+06 3.33849e+06 114 3.22142e+06 1.68498e+06 0.00560889 3.1442e+06 49.3934 0.0085505 0.19181 0 51.0167 GTEX-RNOR-0011-R1A-SM-2TWD5 C1, A1 6.3 Brain Brain - Hippocampus 0001954 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R1A-SM-5SI8F C1, A1 6.3 Brain Brain - Hippocampus 0001954 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989758 660626 0.959454 0.99291 0.839868 23824 1 76 0.00232516 270 0 9.12228e+07 0.0400444 4.11003e+06 9.18742e+07 9.49748e+06 23836 4.53687e+07 0 0.119587 0.99291 0.833913 9.12228e+07 0.00348582 1.9853e+07 2.51118e+07 1.98693e+07 307 1.9776e+07 1.15281e+07 0.00290364 2.02074e+07 50.5394 0.0447354 0.996063 0 50.0205 GTEX-RNOR-0011-R1A-SM-CNNP5 C1, A1 6.3 Brain Brain - Hippocampus 0001954 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-9410 07/26/2016 TruSeq.v1 RNASEQ 0.993208 726182 0.964816 0.994974 0.852433 24970 1 76 0.00260969 375 0 1.26801e+08 0.0347245 6.56212e+06 1.27442e+08 1.27643e+07 24990 6.31565e+07 0 0.112383 0.994974 0.848149 1.26801e+08 0.00353493 2.76736e+07 2.69498e+07 2.80288e+07 334 2.79871e+07 1.52758e+07 0.00307149 2.7914e+07 49.9346 0.0514912 0.996741 0 50.3188 GTEX-RNOR-0011-R3A-SM-2TF5J C1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.16864 104227 0.929577 0.157633 0.786937 18556 1 76 0.00270819 94 0 1.3792e+07 0.0698097 520267 8.74941e+07 1.32254e+07 18559 6.2894e+06 0 0.14264 0.157633 0.124048 1.3792e+07 0.0116093 3.08909e+06 5.8234e+06 3.22867e+06 110 2.75767e+06 1.58134e+06 0.00746951 2.67424e+06 49.232 0.00594631 0.146627 0 51.1046 GTEX-RNOR-0011-R3A-SM-2TWD1 C1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R3A-SM-5SI8E C1, A1 7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991353 925043 0.956769 0.993898 0.846478 24216 1 76 0.00219883 373 0 1.06465e+08 0.0427476 4.29846e+06 1.07119e+08 1.06522e+07 24236 5.29789e+07 0 0.11029 0.993898 0.841313 1.06465e+08 0.00323569 2.31799e+07 2.81646e+07 2.32137e+07 335 2.31754e+07 1.38744e+07 0.00271593 2.34783e+07 50.3246 0.0401279 0.996444 0 50.0365 GTEX-RNOR-0011-R4A-SM-2TWCS C1, A1 6.2 Brain Brain - Amygdala 0001876 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R4A-SM-3GAD3 C1, A1 6.2 Brain Brain - Amygdala 0001876 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.89649 157892 0.971099 0.900132 0.866733 23178 1 76 0.00275252 159 0 7.52195e+07 0.0285085 4.42619e+06 8.3565e+07 1.19708e+07 23199 3.73422e+07 0 0.104366 0.900132 0.780174 7.52195e+07 0.00919469 1.65917e+07 8.39962e+06 1.69372e+07 195 1.69767e+07 9.75629e+06 0.00596057 1.68209e+07 49.7694 0.052967 0.903773 0 50.5152 GTEX-RNOR-0011-R5A-SM-2TF4J C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.686364 537405 0.936601 0.686098 0.805457 23160 1 76 0.00259287 137 0 6.29647e+07 0.0628121 2.12551e+06 9.17721e+07 9.39398e+06 23177 3.11229e+07 0 0.131143 0.686098 0.552623 6.29647e+07 0.00421229 1.34041e+07 2.35136e+07 1.36701e+07 167 1.35436e+07 7.83884e+06 0.0034029 1.35202e+07 49.9567 0.0231607 0.685831 0 50.4912 GTEX-RNOR-0011-R5A-SM-2TWD3 C1, A1 7.9 Brain Brain - Caudate (basal ganglia) 0001873 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R6A-SM-2TWCF C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R7A-SM-2TF4V C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.849026 1.21836e+06 0.901778 0.849453 0.746942 23438 1 76 0.00285306 198 0 8.67404e+07 0.0977757 4.78576e+06 1.02113e+08 9.50311e+06 23469 4.2969e+07 0 0.154837 0.849453 0.634491 8.67404e+07 0.00419714 1.74848e+07 6.54991e+07 1.85339e+07 241 1.83144e+07 7.74775e+06 0.00352476 1.77634e+07 49.2364 0.0468672 0.849879 0 51.4563 GTEX-RNOR-0011-R7A-SM-2TWCV C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0011-R8A-SM-EZ6MN C1, A1 5.7 Brain Brain - Hypothalamus 0001898 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987545 256308 0.963618 0.98935 0.853162 22877 1 76 0.00275243 209 0 6.60854e+07 0.036158 5.7929e+06 6.67967e+07 5.08878e+06 22892 3.29103e+07 0 0.110456 0.98935 0.844076 6.60854e+07 0.00414206 1.44975e+07 9.37178e+06 1.48028e+07 207 1.46661e+07 7.59016e+06 0.00344598 1.47361e+07 50.119 0.0867242 0.991156 0 50.5209 GTEX-RNOR-0011-R9A-SM-2TF52 C1, A1 7.1 Brain Brain - Spinal cord (cervical c-1) 0006469 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.383074 525689 0.879201 0.380283 0.679043 21422 1 76 0.00266226 117 0 3.10848e+07 0.120225 582721 8.17411e+07 1.27738e+07 21437 1.5182e+07 0 0.200158 0.380283 0.258229 3.10848e+07 0.00587023 6.22961e+06 2.91335e+07 6.55454e+06 122 6.37066e+06 3.57306e+06 0.00427802 6.20662e+06 49.3479 0.00712886 0.377492 0 51.2708 GTEX-RNOR-0011-R9A-SM-2TWB8 C1, A1 7.1 Brain Brain - Spinal cord (cervical c-1) 0006469 680 BP-22572 RNA isolation_PAXgene Tissue miRNA 02/21/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0126-SM-2TF57 1 C1 6 pieces up to 7x3 mm; 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 827 636 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 EXCLUDE 0.964144 155211 0.96533 0.966184 0.739925 25514 1 76 0.00268821 218 0 9.64686e+07 0.0344836 767299 9.9845e+07 8.26605e+06 25584 4.78672e+07 0 0.225405 0.966184 0.714903 9.64686e+07 0.00374083 2.09328e+07 1.10849e+07 2.13085e+07 237 2.12381e+07 1.29663e+07 0.00321341 2.11863e+07 49.9389 0.0076849 0.968223 0 50.4446 GTEX-RNOR-0126-SM-2TWAZ 1 C1 6 pieces up to 7x3 mm; 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 827 636 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0126-SM-E9J4R 1 C1 6 pieces up to 7x3 mm; 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 827 636 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.981272 590274 0.967374 0.982425 0.749805 25168 1 76 0.00212798 224 0 1.02404e+08 0.0324274 715817 1.04236e+08 5.54882e+06 25208 5.09837e+07 0 0.217569 0.982425 0.736628 1.02404e+08 0.00315344 2.23671e+07 1.14581e+07 2.26039e+07 254 2.25091e+07 1.50899e+07 0.00264011 2.2583e+07 50.0819 0.00686729 0.983579 0 50.2632 GTEX-RNOR-0226-SM-EZ6MF 0 C1 2 pieces, 8x7 & 8x7 mm; well fixed 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 824 640 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987872 277864 0.972253 0.989521 0.78061 23569 1 76 0.00266585 218 0 8.67547e+07 0.0274648 606906 8.76735e+07 6.47339e+06 23603 4.32045e+07 0 0.191643 0.989521 0.77243 8.67547e+07 0.00408392 1.90445e+07 8.25371e+06 1.9153e+07 220 1.91559e+07 1.35859e+07 0.0033737 1.91736e+07 50.023 0.00692234 0.991169 0 50.142 GTEX-RNOR-0326-SM-2TF51 0 C1 2 pieces, 5x3 & 5x4 mm; ~30% adipose in and around nerve bundles 7.4 Nerve Nerve - Tibial 0001323 840 624 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.426499 92671 0.958323 0.427395 0.739472 22578 1 76 0.00257228 117 0 4.25074e+07 0.0413575 219412 9.94569e+07 1.82362e+07 22604 2.09654e+07 0 0.218851 0.427395 0.316047 4.25074e+07 0.00431826 9.18357e+06 4.9011e+06 9.33955e+06 111 9.31865e+06 5.82203e+06 0.00344344 9.28428e+06 49.9076 0.0022061 0.428291 0 50.421 GTEX-RNOR-0326-SM-2TWB6 0 C1 2 pieces, 5x3 & 5x4 mm; ~30% adipose in and around nerve bundles 7.4 Nerve Nerve - Tibial 0001323 840 624 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0426-SM-2TF4U 0 C1 2 pieces, 2x2 & 2.5x1 mm; <5% adipose 7.8 Blood Vessel Artery - Tibial 0007610 844 621 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.815948 145042 0.968235 0.818177 0.799607 22706 1 76 0.00240654 168 0 7.85109e+07 0.0313875 370814 9.59584e+07 9.28448e+06 22732 3.88305e+07 0 0.168628 0.818177 0.65422 7.85109e+07 0.00383232 1.67094e+07 7.47722e+06 1.70556e+07 181 1.70332e+07 1.35219e+07 0.00311749 1.69276e+07 49.8444 0.00386432 0.820406 0 50.5127 GTEX-RNOR-0426-SM-2TWAN 0 C1 2 pieces, 2x2 & 2.5x1 mm; <5% adipose 7.8 Blood Vessel Artery - Tibial 0007610 844 621 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0526-SM-2TF4O 0 C1 2 pieces, 9x6 & 9x7 mm; minimal adipose 8.3 Muscle Muscle - Skeletal 0011907 870 596 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.924238 194201 0.97446 0.927795 0.852726 19571 1 76 0.00233072 147 0 8.02976e+07 0.0253059 1.02323e+06 8.65466e+07 7.27706e+06 19590 3.97902e+07 0 0.121734 0.927795 0.791155 8.02976e+07 0.00355565 1.69369e+07 1.29718e+07 1.71836e+07 178 1.71831e+07 1.61478e+07 0.00294084 1.72076e+07 50.0356 0.0118229 0.931353 0 50.3616 GTEX-RNOR-0526-SM-2TWB9 0 C1 2 pieces, 9x6 & 9x7 mm; minimal adipose 8.3 Muscle Muscle - Skeletal 0011907 870 596 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0726-SM-2TF5I 1 C1 2 pieces, 9x6 & 8x5 mm; extensive recent hemorrhage 7 Lung Lung 0008952 923 544 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.922087 230807 0.97282 0.92564 0.711964 23618 1 76 0.00258507 202 0 9.25565e+07 0.0268115 629803 9.9992e+07 7.78348e+06 23663 4.58284e+07 0 0.260856 0.92564 0.659022 9.25565e+07 0.00346407 2.04421e+07 9.32856e+06 2.06544e+07 228 2.07539e+07 1.24271e+07 0.00302288 2.06786e+07 49.9091 0.00629854 0.929193 0 50.2584 GTEX-RNOR-0726-SM-2TWBF 1 C1 2 pieces, 9x6 & 8x5 mm; extensive recent hemorrhage 7 Lung Lung 0008952 923 544 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0826-SM-2TF5C 1 C1 2 pieces, 8x6 & 8x6 mm; 6.6 Heart Heart - Left Ventricle 0006566 925 543 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.703504 132735 0.975955 0.705125 0.842676 20794 1 76 0.00285332 121 0 6.26039e+07 0.0238055 3.09259e+06 8.87842e+07 9.47937e+06 20813 3.08596e+07 0 0.13328 0.705125 0.594191 6.26039e+07 0.00461424 1.34357e+07 9.06865e+06 1.41959e+07 150 1.41639e+07 9.25857e+06 0.00373175 1.35833e+07 48.9536 0.0348326 0.706746 0 51.3756 GTEX-RNOR-0826-SM-2TWBE 1 C1 2 pieces, 8x6 & 8x6 mm; 6.6 Heart Heart - Left Ventricle 0006566 925 543 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-0926-SM-2TF56 1 C1 2 pieces,9x6 & 8x5 mm; 6.8 Thyroid Thyroid 0002046 929 540 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.809407 265807 0.955122 0.812374 0.744406 24368 1 76 0.00258743 131 0 6.95678e+07 0.044556 459175 8.56352e+07 8.30992e+06 24407 3.44081e+07 0 0.210716 0.812374 0.604737 6.95678e+07 0.00393889 1.48794e+07 1.30897e+07 1.51524e+07 152 1.51776e+07 1.05262e+07 0.00326069 1.50924e+07 49.8592 0.00536199 0.815341 0 50.4545 GTEX-RNOR-0926-SM-2TWCZ 1 C1 2 pieces,9x6 & 8x5 mm; 6.8 Thyroid Thyroid 0002046 929 540 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-1026-SM-48FDF 1 C1 6 pieces up to 8x2 mm; minimal plaque 7 Blood Vessel Artery - Aorta 0001496 930 539 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 TruSeq.v1 RNASEQ 0.98789 330116 0.974654 0.990679 0.783036 22128 1 76 0.00225305 131 0 6.5362e+07 0.0249601 213389 6.59769e+07 6.75752e+06 22146 3.24543e+07 0 0.191618 0.990679 0.775738 6.5362e+07 0.00311542 1.40984e+07 5.64346e+06 1.41439e+07 147 1.41858e+07 1.12258e+07 0.00268302 1.42365e+07 50.0891 0.0032343 0.993469 0 50.0804 GTEX-RNOR-1226-SM-48FDQ 1 C1 6 pieces up to 7x3 mm; 7.3 Esophagus Esophagus - Mucosa 0006920 936 536 BP-21628 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989219 388225 0.965459 0.991384 0.77001 23044 1 76 0.00218377 127 0 6.31335e+07 0.0343263 416767 6.36822e+07 6.39972e+06 23068 3.13922e+07 0 0.195449 0.991384 0.763376 6.31335e+07 0.0030417 1.40063e+07 1.11933e+07 1.40703e+07 143 1.41014e+07 1.02678e+07 0.0026118 1.41138e+07 50.0219 0.00654449 0.99355 0 50.1141 GTEX-RNOR-1326-SM-48FDE 1 C1 6 pieces up to 7x4 mm; 5.9 Esophagus Esophagus - Muscularis 0004648 938 535 BP-21627 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.988019 297591 0.965115 0.990394 0.759771 23114 1 76 0.00235838 138 0 6.62053e+07 0.0346745 722078 6.68474e+07 6.82905e+06 23138 3.2898e+07 0 0.205345 0.990394 0.752472 6.62053e+07 0.00310559 1.41984e+07 6.92758e+06 1.42525e+07 153 1.42605e+07 9.22492e+06 0.00273109 1.43434e+07 50.1449 0.0108019 0.992769 0 50.0952 GTEX-RNOR-1426-SM-48FDJ 1 C1 2 pieces, 9x7 & 7x7 mm; 6.2 Liver Liver 0001114 940 533 BP-21627 RNA isolation_PAXgene Tissue miRNA 01/20/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.987863 229062 0.966152 0.990916 0.793413 21675 1 76 0.0026964 143 0 6.61464e+07 0.0337317 1.82308e+06 6.67528e+07 6.97376e+06 21697 3.2876e+07 0 0.172739 0.990916 0.786205 6.61464e+07 0.00344318 1.44561e+07 9.68156e+06 1.44126e+07 168 1.43815e+07 7.52145e+06 0.00306864 1.46678e+07 50.4929 0.027311 0.993969 0 49.9247 GTEX-RNOR-1626-SM-EZ6MM 1 C1 2 pieces, 12x6 & 11x6 mm; 10-20% adipose 5.8 Adrenal Gland Adrenal Gland 0002369 943 532 BP-21668 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98756 249667 0.971342 0.989212 0.833326 24285 1 76 0.00293581 270 0 1.05414e+08 0.0284765 7.81277e+06 1.06564e+08 7.87855e+06 24315 5.25372e+07 0 0.138015 0.989212 0.824336 1.05414e+08 0.00418227 2.30276e+07 1.46074e+07 2.34206e+07 315 2.33547e+07 1.09236e+07 0.003558 2.32418e+07 49.8788 0.0733154 0.990863 0 50.423 GTEX-RNOR-2226-SM-2TF5O 1 C1 4 pieces up to 5x3.5 mm; 6.7 Brain Brain - Cerebellum 0002037 964 515 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.917049 457376 0.935604 0.919828 0.706488 24610 1 76 0.00280433 151 0 8.06628e+07 0.0640183 1.45764e+06 8.76934e+07 7.83607e+06 24652 3.99305e+07 0 0.229116 0.919828 0.649847 8.06628e+07 0.00397789 1.70557e+07 2.04785e+07 1.74293e+07 182 1.74477e+07 9.23866e+06 0.00338934 1.72603e+07 49.73 0.016622 0.922606 0 50.5417 GTEX-RNOR-2226-SM-2TWDA 1 C1 4 pieces up to 5x3.5 mm; 6.7 Brain Brain - Cerebellum 0002037 964 515 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-2326-SM-2TF4I 1 C1 4 pieces up to 5x5 mm; 6.2 Brain Brain - Cortex 0001870 966 515 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.934673 367236 0.958367 0.941409 0.818852 23598 1 76 0.00286539 181 0 7.52055e+07 0.041288 2.80229e+06 7.98861e+07 6.99149e+06 23617 3.71158e+07 0 0.139515 0.941409 0.770875 7.52055e+07 0.00417802 1.60926e+07 1.28442e+07 1.67189e+07 213 1.67572e+07 8.26032e+06 0.00351701 1.65228e+07 49.6478 0.0350786 0.948145 0 50.9544 GTEX-RNOR-2326-SM-2TWC7 1 C1 4 pieces up to 5x5 mm; 6.2 Brain Brain - Cortex 0001870 966 515 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RNOR-2426-SM-48FDY 1 C1 2 pieces, 10x6 (anterior), 3x2 mm (posterior) 6.6 Pituitary Pituitary 0000007 966 516 BP-21667 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.989064 374763 0.95493 0.991152 0.75843 24217 1 76 0.00230862 122 0 5.86554e+07 0.0448456 202782 5.9179e+07 5.7119e+06 24241 2.91618e+07 0 0.196501 0.991152 0.751719 5.86554e+07 0.00324596 1.22082e+07 9.4483e+06 1.2268e+07 134 1.22946e+07 9.05093e+06 0.0027763 1.23082e+07 50.0275 0.00342659 0.993241 0 50.1222 GTEX-RTLS-0004-SM-2RXEU C1 Blood Whole Blood 0013756 550 BP-21496 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6992696029_R03C01 GTEX-RTLS-0004-SM-2XK2Y C1 Blood Whole Blood 0013756 550 BP-21496 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R01C02 GTEX-RTLS-0004-SM-3USSE C1 Blood Whole Blood 0013756 550 BP-21496 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-RTLS-0004-SM-7DLGV C1 Blood Whole Blood 0013756 550 BP-21496 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RTLS-0006-SM-2TF58 C1 8 Blood Whole Blood 0013756 550 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.869213 1.26484e+06 0.91209 0.871524 0.645642 19780 1 76 0.00275973 92 0 8.35211e+07 0.0870499 245156 9.58334e+07 9.28289e+06 19804 4.13528e+07 0 0.266448 0.871524 0.562692 8.35211e+07 0.00404893 1.77121e+07 1.34338e+08 1.84582e+07 117 1.85076e+07 1.58151e+07 0.00340262 1.78915e+07 49.1537 0.00255815 0.873834 0 51.0313 GTEX-RTLS-0006-SM-2TWAQ C1 8 Blood Whole Blood 0013756 550 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0008-SM-48FET C1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 633 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3057 04/18/2013 TruSeq.v1 RNASEQ 0.992137 544307 0.971715 0.994079 0.840643 20636 1 76 0.00188797 154 0 6.77628e+07 0.0278831 218607 6.81664e+07 6.58636e+06 20650 3.37166e+07 0 0.131072 0.994079 0.835666 6.77628e+07 0.0024639 1.50445e+07 8.90343e+06 1.507e+07 158 1.51359e+07 1.40158e+07 0.00217537 1.51051e+07 49.9491 0.00320696 0.996021 0 50.0424 GTEX-RTLS-0126-SM-447CA 1 C1 6 pieces up to 8.6x2.2 mm; 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 632 783 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-2912,LCSET-3246 05/11/2013 TruSeq.v1 RNASEQ 0.987123 205984 0.977228 0.989167 0.82799 22211 1 76 0.00201723 146 0 6.23527e+07 0.0225452 448024 6.30355e+07 2.80611e+06 22229 3.10123e+07 0 0.149238 0.989167 0.819021 6.23527e+07 0.00273543 1.38018e+07 6.40139e+06 1.38492e+07 154 1.38777e+07 1.09068e+07 0.00237559 1.38968e+07 50.0345 0.00710748 0.991211 0 50.0858 GTEX-RTLS-0226-SM-2TF5E 1 C1 2 pieces, 8x7 mm each; well fixed 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 635 781 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.789147 272797 0.965374 0.794525 0.748741 22896 1 76 0.00258662 148 0 7.39364e+07 0.0342869 532419 9.30575e+07 9.74198e+06 22937 3.64287e+07 0 0.216632 0.794525 0.594894 7.39364e+07 0.00400404 1.59513e+07 1.24583e+07 1.63392e+07 169 1.64736e+07 1.00053e+07 0.00329053 1.62818e+07 49.7073 0.0057214 0.799902 0 50.6006 GTEX-RTLS-0326-SM-2TF6A 1 C1 2 pieces, 6x3 & 4x3 mm; 1 has ~30% adipose 6.8 Nerve Nerve - Tibial 0001323 638 778 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.56951 120966 0.949257 0.571133 0.701234 21932 1 76 0.00597971 117 0 3.65005e+07 0.0496676 185966 6.39089e+07 1.96206e+07 21953 1.79223e+07 0 0.248023 0.571133 0.400498 3.65005e+07 0.0137932 7.74764e+06 9.26454e+06 8.10389e+06 104 8.05834e+06 4.88220e+06 0.00987534 7.88063e+06 49.4425 0.00290986 0.572757 0 51.1237 GTEX-RTLS-0326-SM-2TWAO 1 C1 2 pieces, 6x3 & 4x3 mm; 1 has ~30% adipose 6.8 Nerve Nerve - Tibial 0001323 638 778 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0426-SM-2TF5K 1 C1 2 pieces, ~2 mm arteries with ~30% peripheral adipose, fibrous and nerve tissue 7.4 Blood Vessel Artery - Tibial 0007610 639 778 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.956798 283962 0.970606 0.964406 0.810993 22878 1 76 0.00242578 282 0 1.03483e+08 0.0289939 539311 1.07302e+08 9.67244e+06 22906 5.10794e+07 0 0.159613 0.964406 0.782126 1.03483e+08 0.00354655 2.18805e+07 8.0223e+06 2.22593e+07 316 2.24808e+07 1.8465e+07 0.00298175 2.23853e+07 49.8936 0.00502609 0.972014 0 50.429 GTEX-RTLS-0426-SM-2TWBI 1 C1 2 pieces, ~2 mm arteries with ~30% peripheral adipose, fibrous and nerve tissue 7.4 Blood Vessel Artery - Tibial 0007610 639 778 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0526-SM-2TF64 1 C1 2 pieces, 7x7 & 7x7 mm; ~10% adipose within pieces 7.7 Muscle Muscle - Skeletal 0011907 641 776 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.855884 300441 0.966193 0.861781 0.841718 20443 1 76 0.00482008 111 0 6.36571e+07 0.0334663 690709 7.38669e+07 2.28962e+07 20451 3.14155e+07 0 0.124475 0.861781 0.725377 6.36571e+07 0.01233 1.32824e+07 1.66945e+07 1.38672e+07 123 1.39569e+07 1.13083e+07 0.00854934 1.35768e+07 49.3099 0.00935072 0.867678 0 51.0769 GTEX-RTLS-0526-SM-2TWBW 1 C1 2 pieces, 7x7 & 7x7 mm; ~10% adipose within pieces 7.7 Muscle Muscle - Skeletal 0011907 641 776 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0626-SM-2TF6G 2 C1 2 pieces, 10x6 & 10x7 mm; ~25% skeletal muscle at edge of 1 piece 6.5 Thyroid Thyroid 0002046 648 770 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.143792 59615 0.927989 0.14017 0.648656 17754 1 76 0.00572031 91 0 8.87137e+06 0.0657047 87962 6.32901e+07 2.3238e+07 17757 4.14405e+06 0 0.279333 0.14017 0.0909221 8.87137e+06 0.0175385 1.76927e+06 4.88312e+06 2.10588e+06 99 1.89455e+06 1.04109e+06 0.0117821 1.77981e+06 48.4386 0.00138982 0.136548 0 54.3431 GTEX-RTLS-0626-SM-2TWAT 2 C1 2 pieces, 10x6 & 10x7 mm; ~25% skeletal muscle at edge of 1 piece 6.5 Thyroid Thyroid 0002046 648 770 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0626-SM-5SI7Z 2 C1 2 pieces, 10x6 & 10x7 mm; ~25% skeletal muscle at edge of 1 piece 6.5 Thyroid Thyroid 0002046 648 770 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.987697 283154 0.963002 0.991326 0.726947 24592 1 76 0.00218324 165 0 8.28445e+07 0.0367489 659401 8.35694e+07 8.1697e+06 24634 4.11695e+07 0 0.236055 0.991326 0.720641 8.28445e+07 0.00339109 1.80369e+07 9.40369e+06 1.81899e+07 190 1.82417e+07 1.12908e+07 0.00278496 1.82683e+07 50.0364 0.00789046 0.994954 0 50.2111 GTEX-RTLS-0726-SM-46MV4 1 C1 2 pieces, ~2.5 mm each; 1 has ~60% adipose and 20% myocardium 7 Blood Vessel Artery - Coronary 0001621 656 763 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990951 237605 0.9767 0.992985 0.813869 21279 1 76 0.00205019 114 0 5.63095e+07 0.0229366 285883 5.67074e+07 3.73304e+06 21294 2.80107e+07 0 0.162831 0.992985 0.80816 5.63095e+07 0.00301691 1.22477e+07 5.45949e+06 1.22978e+07 128 1.23185e+07 1.05486e+07 0.00253256 1.23406e+07 50.0448 0.00504137 0.995019 0 50.1021 GTEX-RTLS-0826-SM-2TF5Q 1 C1 2 pieces, 10x6 & 6x6 mm; 6.4 Heart Heart - Left Ventricle 0006566 658 764 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1479 06/01/2012 TruSeq.v1 RNASEQ 0.862526 159694 0.977644 0.864233 0.831411 21419 1 76 0.00277001 367 0 8.78892e+07 0.0222375 5.36434e+06 1.01696e+08 9.55942e+06 21444 4.35701e+07 0 0.146233 0.864233 0.718532 8.78892e+07 0.00400743 1.91978e+07 1.51534e+07 2.04054e+07 335 2.03013e+07 7.98293e+06 0.0033875 1.94391e+07 48.9152 0.0527487 0.86594 0 51.5246 GTEX-RTLS-0826-SM-2TWCX 1 C1 2 pieces, 10x6 & 6x6 mm; 6.4 Heart Heart - Left Ventricle 0006566 658 764 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-0926-SM-2TF5X 1 C1 2 pieces, 7x6 & 10x5 mm; focal hemorrhages 7.4 Lung Lung 0008952 660 763 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.671379 110825 0.968938 0.674537 0.72352 23361 1 76 0.00548618 108 0 5.03525e+07 0.030335 271678 7.46475e+07 2.54124e+07 23386 2.46843e+07 0 0.245418 0.674537 0.488041 5.03525e+07 0.0132045 1.09381e+07 1.00029e+07 1.13205e+07 108 1.13277e+07 7.16684e+06 0.00932729 1.11632e+07 49.6344 0.00363948 0.677695 0 50.8589 GTEX-RTLS-0926-SM-2TWBR 1 C1 2 pieces, 7x6 & 10x5 mm; focal hemorrhages 7.4 Lung Lung 0008952 660 763 BP-21669 RNA isolation_PAXgene Tissue miRNA 01/23/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RTLS-1126-SM-46MUQ 1 C1 6 pieces up to 6x2 mm; 7.7 Esophagus Esophagus - Mucosa 0006920 664 760 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988734 262607 0.974507 0.991331 0.764136 22965 1 76 0.00218526 142 0 7.29458e+07 0.0252445 406465 7.35837e+07 5.05169e+06 22991 3.6269e+07 0 0.21037 0.991331 0.757512 7.29458e+07 0.00310679 1.62938e+07 8.29466e+06 1.63404e+07 161 1.63991e+07 1.23184e+07 0.00264482 1.64201e+07 50.0319 0.00552384 0.993928 0 50.0714 GTEX-RTLS-1226-SM-46MUP 1 C1 6 pieces up to 7x3 mm; 6 Esophagus Esophagus - Muscularis 0004648 666 759 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987353 228202 0.969053 0.990162 0.78617 22875 1 76 0.00227231 132 0 6.66089e+07 0.0307193 1.07394e+06 6.72707e+07 4.60467e+06 22900 3.31024e+07 0 0.182884 0.990162 0.778436 6.66089e+07 0.00325111 1.44167e+07 6.13158e+06 1.45193e+07 160 1.45365e+07 9.31393e+06 0.00276032 1.4576e+07 50.0678 0.0159645 0.992972 0 50.1772 GTEX-RTLS-1326-SM-46MUN 1 C1 2 pieces, 7x6 & 7x6 mm; no lesions 6.6 Liver Liver 0001114 668 758 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991349 235705 0.974669 0.993039 0.831335 20582 1 76 0.00217717 153 0 7.14111e+07 0.0252034 1.13638e+06 7.19117e+07 4.41952e+06 20599 3.55568e+07 0 0.143334 0.993039 0.825548 7.14111e+07 0.00293372 1.57142e+07 8.30625e+06 1.58097e+07 177 1.58134e+07 1.19297e+07 0.0025548 1.5825e+07 50.0183 0.0158024 0.994728 0 50.1515 GTEX-RTLS-2326-SM-46MUH 1 C1 2 pieces, 10x6 & 10x5 mm; corpora albicans; no ova 7 Ovary Ovary 0000992 690 742 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.984515 165816 0.958403 0.986983 0.735589 22883 1 76 0.002123 143 0 6.80347e+07 0.0413453 115583 6.8932e+07 4.82778e+06 22920 3.38231e+07 0 0.222814 0.986983 0.726014 6.80347e+07 0.00298734 1.47164e+07 8.72067e+06 1.47741e+07 140 1.48036e+07 1.3041e+07 0.00255409 1.48457e+07 50.0709 0.00167677 0.989452 0 50.0979 GTEX-RTLS-2426-SM-46MUO 1 C1 2 pieces, 9x7 & 7x7s; no glands 7.1 Uterus Uterus 0000995 693 739 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.988445 237491 0.962548 0.990569 0.69927 23839 1 76 0.00235708 139 0 7.33009e+07 0.0371601 166384 7.39988e+07 4.06509e+06 23878 3.64337e+07 0 0.263278 0.990569 0.692675 7.33009e+07 0.00310556 1.59753e+07 7.11713e+06 1.60021e+07 149 1.60583e+07 1.11374e+07 0.00273052 1.60692e+07 50.017 0.00224847 0.992693 0 50.042 GTEX-RTLS-2626-SM-46MUJ 2 C1 6 pieces up to 7x2 mm; mucosa moderately autolyzed 6.2 Stomach Stomach 0000945 696 737 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987761 163966 0.980206 0.989924 0.838744 22552 1 76 0.00241073 203 0 6.93002e+07 0.0188816 1.15894e+06 7.00056e+07 4.71666e+06 22567 3.44569e+07 0 0.141462 0.989924 0.830293 6.93002e+07 0.0033177 1.56267e+07 1.91618e+07 1.57071e+07 189 1.57258e+07 1.14279e+07 0.00286323 1.57522e+07 50.0419 0.016555 0.992088 0 50.1284 GTEX-RU1J-0002-SM-2RXF5 B1 Blood Whole Blood 0013756 -41 BP-21501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 GTEx_5Mbatch5_March12 05/03/2012 Illumina OMNI SNP Array OMNI 6992629005_R04C01 GTEX-RU1J-0002-SM-2XK2V B1 Blood Whole Blood 0013756 -41 BP-21501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R01C02 GTEX-RU1J-0002-SM-3USSC B1 Blood Whole Blood 0013756 -41 BP-21501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-RU1J-0002-SM-5URDF B1 Blood Whole Blood 0013756 -41 BP-21501 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/17/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RU1J-0003-SM-2XV76 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -41 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-RU1J-0003-SM-3K2A8 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -41 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.967918 538339 0.971031 0.972475 0.795512 21073 1 76 0.013929 127 0 7.34434e+07 0.0283479 564601 7.55221e+07 2.36086e+07 21099 3.64227e+07 0 0.175519 0.972475 0.773616 7.34434e+07 0.014695 1.62398e+07 1.76994e+07 1.64635e+07 112 1.66191e+07 1.68094e+07 0.0143102 1.64172e+07 49.6943 0.00747597 0.977032 0 50.3419 GTEX-RU1J-0006-SM-2TF6M B1 8.5 Blood Whole Blood 0013756 -41 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.560595 926367 0.882047 0.562918 0.690979 18645 1 76 0.00565048 100 0 3.99384e+07 0.116359 147489 7.09489e+07 2.51057e+07 18654 1.95968e+07 0 0.191068 0.562918 0.388964 3.99384e+07 0.0139605 7.79243e+06 4.96656e+07 8.27623e+06 106 8.2939e+06 6.53824e+06 0.00978834 7.94033e+06 48.911 0.00207881 0.56524 0 51.5054 GTEX-RU1J-0006-SM-2TWC6 B1 8.5 Blood Whole Blood 0013756 -41 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU1J-0008-SM-46MV9 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 281 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992724 393562 0.975784 0.994714 0.867906 19909 1 76 0.00180885 139 0 6.10339e+07 0.0238367 147526 6.13583e+07 3.96116e+06 19922 3.03943e+07 0 0.107878 0.994714 0.863319 6.10339e+07 0.00249981 1.35512e+07 8.77812e+06 1.3612e+07 138 1.36669e+07 1.48906e+07 0.00215364 1.36161e+07 49.907 0.00240434 0.996705 0 50.1118 GTEX-RU1J-0126-SM-2TF6Y 1 B1 2 pieces, 8x6 & 6x6; several dilated air spaces 8.8 Lung Lung 0008952 200 1098 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.584826 114571 0.968113 0.585446 0.796405 22495 1 76 0.00515085 94 0 5.13403e+07 0.0298288 175708 8.76944e+07 2.60197e+07 22515 2.52236e+07 0 0.171707 0.585446 0.466252 5.13403e+07 0.0129879 1.11142e+07 8.38092e+06 1.1644e+07 97 1.15986e+07 9.32867e+06 0.00906521 1.12765e+07 49.2959 0.00200364 0.586066 0 51.164 GTEX-RU1J-0126-SM-2TWBN 1 B1 2 pieces, 8x6 & 6x6; several dilated air spaces 8.8 Lung Lung 0008952 200 1098 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU1J-0226-SM-2TF5Y 1 B1 2 pieces, 11x5 & 9x7 mm; 6.9 Thyroid Thyroid 0002046 207 1092 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.46824 525642 0.915967 0.467676 0.669253 21447 1 76 0.00538835 96 0 3.6007e+07 0.0827719 163102 7.69913e+07 2.47259e+07 21463 1.75736e+07 0 0.246714 0.467676 0.312993 3.6007e+07 0.0138182 7.31096e+06 2.52363e+07 7.77847e+06 102 7.59588e+06 4.49786e+06 0.00960835 7.45297e+06 49.5252 0.00211845 0.467111 0 51.5491 GTEX-RU1J-0226-SM-2TWBC 1 B1 2 pieces, 11x5 & 9x7 mm; 6.9 Thyroid Thyroid 0002046 207 1092 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU1J-0326-SM-46MUM 0 B1 6 pieces up to 6x4 mm; excellent specimen 9.8 Esophagus Esophagus - Mucosa 0006920 212 1087 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990483 306510 0.975057 0.992653 0.830362 21889 1 76 0.00209881 163 0 7.55617e+07 0.0246031 265102 7.6121e+07 4.96410e+06 21901 3.76162e+07 0 0.144695 0.992653 0.824261 7.55617e+07 0.00288263 1.70092e+07 1.03968e+07 1.70464e+07 172 1.71035e+07 1.52856e+07 0.00248986 1.71096e+07 50.009 0.00348264 0.994823 0 50.0546 GTEX-RU1J-0426-SM-46MUK 0 B1 6 pieces up to 7x3 mm; 8.9 Esophagus Esophagus - Muscularis 0004648 218 1082 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992272 279641 0.975609 0.994267 0.839455 20750 1 76 0.00198111 155 0 5.85558e+07 0.024068 284499 5.88934e+07 3.76106e+06 20762 2.91491e+07 0 0.136154 0.994267 0.834642 5.85558e+07 0.00276158 1.26801e+07 4.44139e+06 1.26936e+07 140 1.27111e+07 1.07832e+07 0.00237056 1.27744e+07 50.1241 0.00483075 0.996263 0 50.0267 GTEX-RU1J-0526-SM-46MUT 1 B1 6 pieces up to 8x5 mm; well preserved oxyntic mucosa with slight surface sloughing 8.6 Stomach Stomach 0000945 225 1076 BP-21803 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990852 309905 0.97356 0.993397 0.825621 22192 1 76 0.00203691 183 0 7.66837e+07 0.0261349 288519 7.71934e+07 5.4528e+06 22214 3.81639e+07 0 0.147939 0.993397 0.820169 7.66837e+07 0.00308324 1.66345e+07 6.40714e+06 1.67159e+07 185 1.67578e+07 1.36834e+07 0.00255873 1.67744e+07 50.0248 0.00373761 0.995942 0 50.122 GTEX-RU1J-0626-SM-4WAWY 1 B1 2 pieces, 11x10 & 10x10 mm; 50 & 70% adipose tissue; abundant lobular and ductal components; unfixed central areas in adipose tissue 7.7 Breast Breast - Mammary Tissue 0008367 229 1073 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-4162,LCSET-4325 11/02/2013 TruSeq.v1 RNASEQ 0.989613 494007 0.966012 0.991491 0.75779 24299 1 76 0.00253543 157 0 7.77592e+07 0.0329524 229230 7.84266e+07 6.82434e+06 24327 3.86494e+07 0 0.208221 0.991491 0.751343 7.77592e+07 0.00332747 1.71402e+07 1.12776e+07 1.72085e+07 170 1.72191e+07 1.26577e+07 0.0029307 1.72783e+07 50.0858 0.00292286 0.99337 0 50.0994 GTEX-RU1J-0826-SM-46MUU 1 B1 2 pieces, 10x8 & 9x8 mm; numerous ova and follicles present 7.5 Ovary Ovary 0000992 239 1065 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.990129 323179 0.96664 0.992298 0.729169 23066 1 76 0.00210192 131 0 6.70747e+07 0.0331195 104735 6.75954e+07 3.617e+06 23108 3.33665e+07 0 0.23747 0.992298 0.723553 6.70747e+07 0.00294507 1.48058e+07 7.12177e+06 1.48385e+07 142 1.48972e+07 1.07577e+07 0.00252257 1.48909e+07 49.9895 0.00154944 0.994466 0 50.0551 GTEX-RU1J-1026-SM-46MUR 1 B1 2 pieces, 10x9 & 9x8 mm; no glands present 8.7 Uterus Uterus 0000995 243 1063 BP-21804 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992201 262994 0.971186 0.994133 0.796681 22138 1 76 0.00206745 141 0 6.57225e+07 0.0284269 93359 6.61103e+07 4.44069e+06 22164 3.27188e+07 0 0.174505 0.994133 0.792007 6.57225e+07 0.00287079 1.43794e+07 5.26023e+06 1.44009e+07 144 1.44396e+07 1.21594e+07 0.00246834 1.44634e+07 50.0413 0.00141217 0.996065 0 50.0375 GTEX-RU1J-1326-SM-46MUL 1 B1 6 pieces up to 7.6x8.7 mm; surface partially sloughed 6.9 Colon Colon - Transverse 0001157 259 1049 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989227 239969 0.971558 0.991974 0.821653 23075 1 76 0.00227857 164 0 7.02665e+07 0.0280783 725979 7.0835e+07 5.02469e+06 23093 3.49522e+07 0 0.149905 0.991974 0.815058 7.02665e+07 0.00320168 1.53765e+07 7.38894e+06 1.55195e+07 182 1.551e+07 1.00414e+07 0.00273885 1.55591e+07 50.0791 0.0102489 0.994722 0 50.2314 GTEX-RU1J-1426-SM-46MUV 0 B1 6 pieces up to 9x5 mm; excellent preservation 8.1 Vagina Vagina 0000996 263 1046 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99204 271935 0.974659 0.994003 0.794485 23133 1 76 0.00215207 142 0 6.87677e+07 0.0249731 192565 6.91826e+07 4.87967e+06 23159 3.42357e+07 0 0.180174 0.994003 0.789721 6.87677e+07 0.00294599 1.51152e+07 5.29772e+06 1.51707e+07 154 1.52145e+07 1.2147e+07 0.00254825 1.51988e+07 49.9741 0.00278343 0.995966 0 50.0917 GTEX-RU1J-1726-SM-2TF5S 0 B1 2 pieces, 11x9 & 9x6 mm; minimal adipose interspersed 6.9 Muscle Muscle - Skeletal 0011907 289 1023 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.572201 185099 0.966769 0.576133 0.850627 18610 1 76 0.00505644 96 0 4.69351e+07 0.0324052 1.4928e+06 8.14657e+07 2.647e+07 18615 2.30221e+07 0 0.116143 0.576133 0.490074 4.69351e+07 0.0138769 9.85663e+06 1.27067e+07 1.03299e+07 104 1.03968e+07 8.76401e+06 0.00943658 1.00758e+07 49.2159 0.0183243 0.580066 0 51.1722 GTEX-RU1J-1726-SM-2TWCK 0 B1 2 pieces, 11x9 & 9x6 mm; minimal adipose interspersed 6.9 Muscle Muscle - Skeletal 0011907 289 1023 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU1J-1926-SM-2TF6S 0 B1 2 pieces 2 mm in diameter; normal arteries minimal adipose tissue 8.3 Blood Vessel Artery - Tibial 0007610 333 980 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.60805 96141 0.972309 0.611586 0.807111 21619 1 76 0.00508169 112 0 5.80561e+07 0.0258847 228101 9.49271e+07 2.91102e+07 21633 2.84976e+07 0 0.165197 0.611586 0.493618 5.80561e+07 0.0135188 1.23269e+07 7.10701e+06 1.28135e+07 103 1.29305e+07 1.0691e+07 0.00927584 1.25736e+07 49.3003 0.00240291 0.615123 0 50.9678 GTEX-RU1J-1926-SM-2TWBP 0 B1 2 pieces 2 mm in diameter; normal arteries minimal adipose tissue 8.3 Blood Vessel Artery - Tibial 0007610 333 980 BP-21805 RNA isolation_PAXgene Tissue miRNA 01/25/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0004-SM-2RXF6 C1 Blood Whole Blood 0013756 319 BP-21530 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/18/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762436038_R04C01 GTEX-RU72-0004-SM-2XK2S C1 Blood Whole Blood 0013756 319 BP-21530 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/18/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R01C02 GTEX-RU72-0004-SM-4X623 C1 Blood Whole Blood 0013756 319 BP-21530 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/18/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-RU72-0004-SM-5SOEJ C1 Blood Whole Blood 0013756 319 BP-21530 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/18/2012 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RU72-0006-SM-2TF65 C1 7.9 Blood Whole Blood 0013756 319 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.644813 1.593e+06 0.870308 0.648789 0.663977 18137 1 76 0.00580861 91 0 5.14957e+07 0.127623 195184 7.93721e+07 2.60333e+07 18145 2.53381e+07 0 0.206331 0.648789 0.43078 5.14957e+07 0.0145508 1.04078e+07 1.26848e+08 1.0795e+07 106 1.08307e+07 9.70208e+06 0.0101529 1.06557e+07 49.5929 0.0024591 0.652764 0 50.9131 GTEX-RU72-0006-SM-2TWCA C1 7.9 Blood Whole Blood 0013756 319 BP-21535 RNA isolation_PAXgene Blood RNA (Manual) 01/18/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0008-SM-46MV8 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 458 BP-33389 RNA isolation_Trizol Manual (Cell Pellet) 11/19/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991352 408044 0.981616 0.99393 0.888751 19793 1 76 0.00172206 189 0 8.10756e+07 0.0180173 335050 8.15707e+07 5.83429e+06 19801 4.03542e+07 0 0.0928651 0.99393 0.883356 8.10756e+07 0.00252362 1.81133e+07 1.02865e+07 1.82429e+07 186 1.8324e+07 2.1913e+07 0.0021218 1.82396e+07 49.8846 0.00410748 0.996508 0 50.1782 GTEX-RU72-0011-R10A-SM-2TF6D C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.541191 6.07819e+06 0.547286 0.542844 0.27793 19427 1 76 0.00607855 75 0 4.69472e+07 0.447848 2.77975e+06 8.64837e+07 2.94895e+07 19432 2.30349e+07 0 0.269356 0.542844 0.150872 4.69472e+07 0.0137917 5.56732e+06 2.79222e+08 6.24658e+06 95 6.14891e+06 1.03943e+06 0.00992341 5.77006e+06 48.4108 0.0321419 0.544496 0 52.8749 GTEX-RU72-0011-R10A-SM-2TWD4 C1, A1 6.4 Brain Brain - Frontal Cortex (BA9) 0009834 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R11A-SM-2TF6J C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.361899 350193 0.905545 0.362976 0.659278 20738 1 76 0.00549534 86 0 2.79387e+07 0.0911692 601645 7.69712e+07 2.60929e+07 20749 1.36455e+07 0 0.246267 0.362976 0.239302 2.79387e+07 0.0151691 5.60089e+06 1.80655e+07 5.97017e+06 99 5.97576e+06 3.02601e+06 0.0103179 5.7163e+06 48.8904 0.00781649 0.364053 0 51.5957 GTEX-RU72-0011-R11A-SM-2TWD7 C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R11A-SM-5SI8G C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990261 511457 0.942239 0.992713 0.737787 23658 1 76 0.00222161 200 0 8.64947e+07 0.0572934 2.0578e+06 8.71296e+07 7.57784e+06 23688 4.30179e+07 0 0.204452 0.992713 0.732411 8.64947e+07 0.00325071 1.85207e+07 1.8118e+07 1.86479e+07 255 1.86385e+07 1.03271e+07 0.00273489 1.87249e+07 50.1155 0.0236176 0.995166 0 50.1711 GTEX-RU72-0011-R11A-SM-CM2U1 C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-9115 07/13/2016 TruSeq.v1 RNASEQ 0.991852 750409 0.94426 0.99351 0.743418 24291 1 76 0.0021886 271 0 1.04451e+08 0.0552706 2.41323e+06 1.05133e+08 6.49369e+06 24329 5.19824e+07 0 0.200842 0.99351 0.738594 1.04451e+08 0.00300029 2.24602e+07 1.82356e+07 2.2579e+07 320 2.26649e+07 1.32048e+07 0.00259377 2.25324e+07 49.8534 0.022954 0.995169 0 50.1319 GTEX-RU72-0011-R1A-SM-2TWD2 C1, A1 7.4 Brain Brain - Hippocampus 0001954 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R2A-SM-2TF6O C1, A1 6.1 Brain Brain - Substantia nigra 0002038 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.890801 1.37654e+06 0.875825 0.895208 0.72384 20980 1 76 0.00532526 103 0 4.58423e+07 0.12372 3.98206e+06 5.12086e+07 1.41569e+07 20989 2.26131e+07 0 0.151986 0.895208 0.647987 4.58423e+07 0.0114388 8.98589e+06 5.95813e+07 9.51649e+06 121 9.37827e+06 2.80762e+06 0.00836698 9.29965e+06 49.7895 0.0777616 0.899614 0 51.4339 GTEX-RU72-0011-R2A-SM-2TWDC C1, A1 6.1 Brain Brain - Substantia nigra 0002038 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R5A-SM-2TF6U C1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.540584 383327 0.938458 0.543294 0.792995 22175 1 76 0.00528859 88 0 4.89994e+07 0.0595084 3.34085e+06 9.01895e+07 2.90264e+07 22187 2.39863e+07 0 0.145463 0.543294 0.43083 4.89994e+07 0.0141783 1.02017e+07 2.24139e+07 1.08314e+07 104 1.08047e+07 4.90483e+06 0.00971126 1.0476e+07 49.2276 0.0370426 0.546004 0 51.4969 GTEX-RU72-0011-R5A-SM-2TWCN C1, A1 7.3 Brain Brain - Caudate (basal ganglia) 0001873 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R6A-SM-2TF71 C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.507854 336396 0.936823 0.508838 0.793673 21271 1 76 0.0052142 88 0 3.84004e+07 0.0612058 2.8093e+06 7.54669e+07 2.43202e+07 21283 1.88555e+07 0 0.14315 0.508838 0.403851 3.84004e+07 0.0135213 8.02682e+06 1.82808e+07 8.51868e+06 102 8.42204e+06 3.49948e+06 0.00935969 8.19626e+06 49.3207 0.0372256 0.509822 0 51.4864 GTEX-RU72-0011-R6A-SM-2TWCU C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R7A-SM-2TF5U C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.629254 1.1557e+06 0.891833 0.6342 0.757788 20256 1 76 0.00553851 97 0 4.63394e+07 0.107421 5.2559e+06 7.30675e+07 2.41691e+07 20265 2.27195e+07 0 0.134045 0.6342 0.480589 4.63394e+07 0.0135093 9.19224e+06 5.43181e+07 9.79178e+06 113 9.67828e+06 2.63122e+06 0.00949284 9.56594e+06 49.7081 0.0719322 0.639145 0 51.5791 GTEX-RU72-0011-R7A-SM-2TWD8 C1, A1 6.4 Brain Brain - Putamen (basal ganglia) 0001874 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R8A-SM-2TF61 C1, A1 7.4 Brain Brain - Hypothalamus 0001898 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.567164 414837 0.921129 0.569997 0.764276 22015 1 76 0.00547528 98 0 3.42302e+07 0.0777277 1.76412e+06 6.00532e+07 2.35568e+07 22027 1.68016e+07 0 0.156854 0.569997 0.435635 3.42302e+07 0.0139555 7.05723e+06 2.18529e+07 7.44528e+06 103 7.46041e+06 3.6705e+06 0.0096943 7.20728e+06 49.1371 0.029376 0.57283 0 51.3379 GTEX-RU72-0011-R8A-SM-2TWCW C1, A1 7.4 Brain Brain - Hypothalamus 0001898 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0011-R9A-SM-2TF67 C1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.676682 972261 0.900947 0.681304 0.759789 20216 1 76 0.0053123 122 0 4.64262e+07 0.0982464 4.01512e+06 6.81432e+07 2.25034e+07 20228 2.28155e+07 0 0.141158 0.681304 0.517647 4.64262e+07 0.0143235 9.38079e+06 4.36462e+07 1.00719e+07 116 9.95612e+06 3.75577e+06 0.00978734 9.77448e+06 49.5397 0.0589217 0.685925 0 51.7763 GTEX-RU72-0011-R9A-SM-2TWBL C1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 323 BP-22593 RNA isolation_PAXgene Tissue miRNA 02/22/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0126-SM-2TF6Z 1 C1 2 aliquots, ~8x5mm. 7 Thyroid Thyroid 0002046 432 1418 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.620049 152091 0.957338 0.624026 0.687312 23522 1 76 0.00530851 103 0 4.62796e+07 0.041664 285086 7.41629e+07 2.36573e+07 23550 2.27438e+07 0 0.270026 0.624026 0.428901 4.62796e+07 0.0135571 9.89604e+06 9.71801e+06 1.0201e+07 102 1.02974e+07 6.11518e+06 0.00940654 1.00864e+07 49.4825 0.00384405 0.628002 0 50.7588 GTEX-RU72-0126-SM-2TWBK 1 C1 2 aliquots, ~8x5mm. 7 Thyroid Thyroid 0002046 432 1418 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0226-SM-46MUD 1 C1 2 aliquots, ~2x1mm. LDACC NOTE: large adherent aggegates of fat (1-2mm) surround both 6 Blood Vessel Artery - Coronary 0001621 437 1413 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988436 237947 0.972736 0.990552 0.770865 22288 1 76 0.00214744 129 0 6.57069e+07 0.0270073 212032 6.63336e+07 4.53094e+06 22307 3.26712e+07 0 0.201871 0.990552 0.763582 6.57069e+07 0.0030793 1.43705e+07 5.54224e+06 1.44679e+07 148 1.44801e+07 1.08523e+07 0.00261237 1.44955e+07 50.0266 0.00319645 0.992669 0 50.1689 GTEX-RU72-0326-SM-2TF5T 1 C1 2 aliquots, ~7x6mm. Mild ischemic changes 7.8 Heart Heart - Left Ventricle 0006566 439 1412 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.811959 150012 0.973693 0.817357 0.813764 21322 1 76 0.00488794 94 0 6.11371e+07 0.025696 1.64724e+06 7.47985e+07 2.34975e+07 21340 3.01697e+07 0 0.159928 0.817357 0.665136 6.11371e+07 0.0133142 1.32616e+07 1.12632e+07 1.37998e+07 116 1.39157e+07 9.75494e+06 0.00907324 1.35171e+07 49.2735 0.0220224 0.822755 0 50.9944 GTEX-RU72-0326-SM-2TWCE 1 C1 2 aliquots, ~7x6mm. Mild ischemic changes 7.8 Heart Heart - Left Ventricle 0006566 439 1412 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0526-SM-2TF5Z 2 C1 2 aliquots, ~8x5mm. Severe diffuse alveolar congestion/edema 6.9 Lung Lung 0008952 447 1406 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.62859 81642 0.965016 0.630312 0.694628 21979 1 76 0.00546503 100 0 3.59849e+07 0.0344593 207015 5.70907e+07 1.9213e+07 21997 1.76751e+07 0 0.270388 0.630312 0.437833 3.59849e+07 0.0134578 7.77409e+06 6.4206e+06 8.06926e+06 106 8.02071e+06 4.63352e+06 0.00945051 7.90864e+06 49.6482 0.00362607 0.632035 0 50.9315 GTEX-RU72-0526-SM-2TWBS 2 C1 2 aliquots, ~8x5mm. Severe diffuse alveolar congestion/edema 6.9 Lung Lung 0008952 447 1406 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-0626-SM-46MUI 1 C1 2 aliquots, ~9x7mm. Multiple atrophic TDLUs noted on images 6.3 Breast Breast - Mammary Tissue 0008367 449 1405 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989069 273074 0.971041 0.991462 0.713533 24600 1 76 0.0022654 142 0 7.20609e+07 0.028545 508632 7.26815e+07 4.8918e+06 24638 3.58268e+07 0 0.257509 0.991462 0.707441 7.20609e+07 0.00322323 1.59342e+07 7.19057e+06 1.59526e+07 154 1.60137e+07 1.05699e+07 0.00274316 1.60412e+07 50.0429 0.00699809 0.993855 0 50.0287 GTEX-RU72-0726-SM-46MUW 1 C1 6 pieces, 6.5x1.5mm. Squamous mucosa is ~10-15% of thickness 8.4 Esophagus Esophagus - Mucosa 0006920 454 1401 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991064 290824 0.970858 0.993056 0.775736 22875 1 76 0.00212942 130 0 6.70343e+07 0.0289208 174190 6.75031e+07 4.42667e+06 22899 3.33687e+07 0 0.195123 0.993056 0.770349 6.70343e+07 0.00307572 1.49948e+07 7.88481e+06 1.50283e+07 144 1.5082e+07 1.21922e+07 0.00260162 1.5073e+07 49.985 0.00258048 0.995049 0 50.0557 GTEX-RU72-0826-SM-46MUS 1 C1 6 pieces, 8x4mm 6.5 Esophagus Esophagus - Muscularis 0004648 456 1399 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99132 216819 0.968843 0.993107 0.765101 22474 1 76 0.00214699 126 0 6.29749e+07 0.0309441 694919 6.34121e+07 4.26729e+06 22504 3.13457e+07 0 0.203741 0.993107 0.759827 6.29749e+07 0.00300276 1.36e+07 5.86553e+06 1.36489e+07 146 1.3656e+07 8.85561e+06 0.00257411 1.36987e+07 50.0782 0.0109588 0.994893 0 50.0897 GTEX-RU72-0926-SM-2TF6B 0 C1 6 pieces, ~7.5x3mm; squamous epithelium is ~1-2% of thickness 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 457 1399 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.484087 96506 0.962016 0.486105 0.748137 21220 1 76 0.00529788 110 0 3.01057e+07 0.0367618 352918 6.19325e+07 2.12057e+07 21229 1.47308e+07 0 0.213879 0.486105 0.363673 3.01057e+07 0.0146147 6.39647e+06 5.98748e+06 6.76004e+06 107 6.73981e+06 4.24872e+06 0.00993696 6.54518e+06 49.2675 0.00569843 0.488123 0 51.3817 GTEX-RU72-0926-SM-2TWAP 0 C1 6 pieces, ~7.5x3mm; squamous epithelium is ~1-2% of thickness 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 457 1399 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-1026-SM-46MUG 0 C1 2 aliquots, ~9x8mm 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 460 1397 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99022 206820 0.972377 0.992388 0.771876 22742 1 76 0.00220441 131 0 6.25995e+07 0.0272775 326736 6.30797e+07 4.29852e+06 22768 3.11467e+07 0 0.200501 0.992388 0.766001 6.25995e+07 0.00307358 1.37348e+07 6.07719e+06 1.37518e+07 144 1.37878e+07 9.73395e+06 0.00263804 1.38286e+07 50.0739 0.00517973 0.994557 0 50.031 GTEX-RU72-1126-SM-2TF6H 0 C1 2 aliquots, ~4.5x3mm. Discontinuous rim of fat, up to ~0.5mm 6.4 Nerve Nerve - Tibial 0001323 469 1389 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.390681 52597 0.956766 0.392509 0.682867 20691 1 76 0.00528075 105 0 2.39243e+07 0.0409884 126762 6.09523e+07 2.11309e+07 20705 1.16812e+07 0 0.273899 0.392509 0.268032 2.39243e+07 0.0147243 5.06036e+06 4.57808e+06 5.37131e+06 105 5.38371e+06 2.99987e+06 0.00998055 5.18328e+06 49.0516 0.00207969 0.394338 0 51.4904 GTEX-RU72-1126-SM-2TWAV 0 C1 2 aliquots, ~4.5x3mm. Discontinuous rim of fat, up to ~0.5mm 6.4 Nerve Nerve - Tibial 0001323 469 1389 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-1226-SM-2TF6N 0 C1 2 aliquots, ~2.5mm d. Excellent clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 470 1388 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.850711 104828 0.969259 0.855861 0.772669 21960 1 76 0.00512139 113 0 6.52557e+07 0.0303531 428371 7.62457e+07 2.4482e+07 21988 3.21951e+07 0 0.19659 0.855861 0.661297 6.52557e+07 0.0127724 1.38413e+07 7.07425e+06 1.4184e+07 118 1.4289e+07 1.05026e+07 0.00892386 1.40938e+07 49.6562 0.0056183 0.861011 0 50.6115 GTEX-RU72-1226-SM-2TWBD 0 C1 2 aliquots, ~2.5mm d. Excellent clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 470 1388 BP-21837 RNA isolation_PAXgene Tissue miRNA 01/26/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-1326-SM-2TF6T 1 C1 2 9x5mm aliquots, minimal interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 481 1379 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.68827 200317 0.970549 0.691993 0.841971 19370 1 76 0.00483566 95 0 5.22203e+07 0.0283015 776518 7.54636e+07 2.4967e+07 19378 2.57286e+07 0 0.128578 0.691993 0.582638 5.22203e+07 0.0131925 1.10548e+07 1.19197e+07 1.15975e+07 100 1.16999e+07 1.02444e+07 0.00899159 1.12384e+07 48.9939 0.01029 0.695716 0 51.1979 GTEX-RU72-1326-SM-2TWC9 1 C1 2 9x5mm aliquots, minimal interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 481 1379 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-1426-SM-46MUF 1 C1 2 aliquots, ~7x6mm. Moderate congestion, focal microvesicular steatosis involves ~10-15% of parenchyma 6.2 Liver Liver 0001114 502 1358 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990093 202446 0.973394 0.992223 0.840631 20712 1 76 0.00223416 145 0 6.26227e+07 0.0263542 1.64127e+06 6.31135e+07 4.05562e+06 20729 3.11657e+07 0 0.132764 0.992223 0.834093 6.26227e+07 0.00311291 1.35995e+07 9.56315e+06 1.36315e+07 167 1.36524e+07 8.75047e+06 0.00267259 1.37047e+07 50.0957 0.0260051 0.994354 0 50.0588 GTEX-RU72-1926-SM-EAZ3F 2 C1 2 aliquots, ~8x6mm. Minor (~20-30%) 'contamination' by cortex with glomeruli, noted on images 5.5 Kidney Kidney - Medulla 0001293 515 1348 BP-21934 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.987662 379436 0.971541 0.988565 0.848264 24127 1 76 0.00209541 372 0 9.62019e+07 0.0282629 7.91044e+06 9.73147e+07 7.82498e+06 24154 4.79453e+07 0 0.123277 0.988565 0.838564 9.62019e+07 0.00301248 2.13621e+07 1.47099e+07 2.16723e+07 347 2.15908e+07 1.16669e+07 0.00255353 2.15379e+07 49.9386 0.0812872 0.989469 0 50.3605 GTEX-RU72-2226-SM-46MUE 1 C1 2 aliquots, ~9x7mm. Postmenopausal atrophy, prominent corpora albicantia 7 Ovary Ovary 0000992 521 1344 BP-21934 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989654 285947 0.966064 0.99201 0.779701 22902 1 76 0.00199757 154 0 7.24593e+07 0.0336929 159846 7.30429e+07 4.91884e+06 22936 3.60354e+07 0 0.186363 0.99201 0.773471 7.24593e+07 0.00290106 1.57985e+07 8.87896e+06 1.58551e+07 161 1.588e+07 1.38479e+07 0.00244824 1.59428e+07 50.0987 0.00218839 0.994367 0 50.0893 GTEX-RU72-2526-SM-EWRML 3 C1 6 pieces, ~6x2.5mm, urothelium totally sloughed 5.5 Bladder Bladder 0001255 526 1342 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.978338 201229 0.973331 0.981505 0.835462 21822 1 76 0.00247863 202 0 7.43154e+07 0.0264993 1.87605e+06 7.57158e+07 4.8041e+06 21838 3.6944e+07 0 0.137869 0.981505 0.820009 7.43154e+07 0.00323833 1.62658e+07 8.42402e+06 1.65772e+07 216 1.65271e+07 9.30041e+06 0.00284837 1.65302e+07 50.0047 0.0247775 0.984671 0 50.4741 GTEX-RU72-2626-SM-4GIE1 2 C1 2 aliquots, ~6x6mm. Endometrial glands/stroma are ~10% of thickness, glands poorly preserved 6.7 Uterus Uterus 0000995 530 1339 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-3479 07/19/2013 TruSeq.v1 EXCLUDE 0.984253 312956 0.963604 0.988115 0.761802 24270 1 76 0.00246453 170 0 8.12104e+07 0.0361542 236788 8.21872e+07 8.64027e+06 24304 4.0326e+07 0 0.201802 0.988115 0.752748 8.12104e+07 0.00443357 1.76552e+07 9.0434e+06 1.77455e+07 184 1.78182e+07 1.2831e+07 0.0034452 1.78921e+07 50.1034 0.00288108 0.991977 0 50.1275 GTEX-RU72-2626-SM-4TT75 2 C1 2 aliquots, ~6x6mm. Endometrial glands/stroma are ~10% of thickness, glands poorly preserved 6.7 Uterus Uterus 0000995 530 1339 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-4016 09/28/2013 TruSeq.v1 EXCLUDE 0.988801 543687 0.956275 0.991638 0.750475 24728 1 76 0.00279401 202 0 9.27248e+07 0.0434892 294562 9.35067e+07 8.8138e+06 24768 4.60816e+07 0 0.2058 0.991638 0.744199 9.27248e+07 0.00408985 2.00411e+07 1.74866e+07 2.01333e+07 213 2.01487e+07 1.45155e+07 0.00344008 2.02914e+07 50.1764 0.00315017 0.994475 0 50.1148 GTEX-RU72-2626-SM-CYPS6 2 C1 2 aliquots, ~6x6mm. Endometrial glands/stroma are ~10% of thickness, glands poorly preserved 6.7 Uterus Uterus 0000995 530 1339 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.991797 943966 0.963333 0.993286 0.757693 27102 1 76 0.003388 386 0 1.73214e+08 0.0364113 587728 1.74385e+08 1.65129e+07 27173 8.62374e+07 0 0.20564 0.993286 0.752606 1.73214e+08 0.00508814 3.77173e+07 2.03359e+07 3.80054e+07 407 3.79947e+07 2.78538e+07 0.0042368 3.79886e+07 49.996 0.0033703 0.994774 0 50.1902 GTEX-RU72-2926-SM-2TF66 2 C1 4pieces, ~5x4mm. Granular layer more autolyzed 7.4 Brain Brain - Cerebellum 0002037 542 1328 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.712941 440149 0.937995 0.717641 0.746303 23576 1 76 0.0052764 95 0 6.10875e+07 0.0611897 1.29869e+06 8.51226e+07 2.69157e+07 23598 3.0034e+07 0 0.191691 0.717641 0.535578 6.10875e+07 0.0134334 1.28216e+07 2.20811e+07 1.32786e+07 110 1.33888e+07 7.83498e+06 0.00932818 1.30796e+07 49.416 0.0152567 0.722342 0 50.8755 GTEX-RU72-2926-SM-2TWB3 2 C1 4pieces, ~5x4mm. Granular layer more autolyzed 7.4 Brain Brain - Cerebellum 0002037 542 1328 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-3026-SM-2TF6C 1 C1 4 pieces, ~5x5mm 6.7 Brain Brain - Cortex 0001870 544 1327 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 TruSeq.v1 EXCLUDE 0.1003 68660 0.925817 0.0995337 0.737303 16959 1 76 0.0059723 83 0 7.87101e+06 0.0637445 351162 7.90788e+07 2.75631e+07 16960 3.67324e+06 0 0.188514 0.0995337 0.0733865 7.87101e+06 0.0213522 1.5179e+06 4.69777e+06 1.86045e+06 97 1.77948e+06 764527 0.0137214 1.58747e+06 47.1486 0.00444066 0.0987679 0 55.0699 GTEX-RU72-3026-SM-2TWCD 1 C1 4 pieces, ~5x5mm 6.7 Brain Brain - Cortex 0001870 544 1327 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RU72-3026-SM-5SI7Y 1 C1 4 pieces, ~5x5mm 6.7 Brain Brain - Cortex 0001870 544 1327 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989356 308510 0.967883 0.992987 0.843641 23183 1 76 0.00206818 268 0 8.41217e+07 0.0317903 4.91642e+06 8.47158e+07 8.02178e+06 23195 4.18258e+07 0 0.124242 0.992987 0.837724 8.41217e+07 0.0033383 1.84482e+07 1.75685e+07 1.85039e+07 298 1.84611e+07 9.06338e+06 0.00270091 1.87561e+07 50.3963 0.0580343 0.996618 0 50.0753 GTEX-RU72-3026-SM-CYPRV 1 C1 4 pieces, ~5x5mm 6.7 Brain Brain - Cortex 0001870 544 1327 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.995708 352559 0.969698 0.996425 0.852395 23559 1 76 0.00223537 269 0 9.80754e+07 0.0299644 5.76924e+06 9.84272e+07 7.26836e+06 23578 4.89163e+07 0 0.117302 0.996425 0.849348 9.80754e+07 0.00251675 2.16229e+07 1.48158e+07 2.19454e+07 327 2.18277e+07 1.09651e+07 0.00237596 2.18001e+07 49.9683 0.0586143 0.997142 0 50.3701 GTEX-RU72-3126-SM-46MUB 2 C1 1 8.5x6mm aliquot 7.1 Pituitary Pituitary 0000007 545 1326 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988841 293620 0.964092 0.991466 0.782411 24075 1 76 0.00213861 126 0 5.93478e+07 0.0356308 371053 5.98586e+07 3.84998e+06 24104 2.95046e+07 0 0.181681 0.991466 0.775734 5.93478e+07 0.00317614 1.2718e+07 7.54423e+06 1.27536e+07 141 1.28061e+07 9.40389e+06 0.002656 1.28143e+07 50.016 0.00619883 0.994091 0 50.07 GTEX-RUSQ-0001-SM-2RXER B1 Blood Whole Blood 0013756 2 BP-21585 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/19/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428098_R01C01 GTEX-RUSQ-0001-SM-2XK38 B1 Blood Whole Blood 0013756 2 BP-21585 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/19/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R02C02 GTEX-RUSQ-0001-SM-3UZFR B1 Blood Whole Blood 0013756 2 BP-21585 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/19/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-RUSQ-0001-SM-5JK34 B1 Blood Whole Blood 0013756 2 BP-21585 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/19/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-RUSQ-0003-SM-2XCEB B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 2 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.406742 167137 0.96901 0.413274 0.791567 20642 1 76 0.00281068 133 0 3.69081e+07 0.0301562 447901 8.93067e+07 1.20022e+07 20656 1.80044e+07 0 0.177443 0.413274 0.327134 3.69081e+07 0.0138941 7.99257e+06 5.9311e+06 8.2298e+06 129 8.48743e+06 8.06431e+06 0.00826479 8.29353e+06 49.4223 0.00501531 0.419805 0 50.7312 GTEX-RUSQ-0003-SM-2XV75 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 2 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-0006-SM-2TF6P B1 6.4 Blood Whole Blood 0013756 2 BP-21622 RNA isolation_PAXgene Blood RNA (Manual) 01/20/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.569358 1.03365e+06 0.896047 0.573339 0.71561 15070 1 76 0.00590712 86 0 4.32318e+07 0.100472 256074 7.54035e+07 2.42223e+07 15070 2.11194e+07 0 0.180437 0.573339 0.410288 4.32318e+07 0.0143201 8.83702e+06 9.9896e+07 9.42455e+06 108 9.43283e+06 9.10318e+06 0.0100844 9.13702e+06 49.2035 0.00339605 0.57732 0 51.6086 GTEX-RUSQ-0006-SM-2TWBZ B1 6.4 Blood Whole Blood 0013756 2 BP-21622 RNA isolation_PAXgene Blood RNA (Manual) 01/20/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-0126-SM-47JWV 1 B1 2 aliquots, ~10x6mm. Better preserved than usual, mild red pulp congestion 6 Spleen Spleen 0002106 167 1283 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986887 354519 0.965255 0.989616 0.809269 23286 1 76 0.00295999 208 0 8.37906e+07 0.0330493 562599 8.46699e+07 8.83825e+06 23310 4.15847e+07 0 0.155986 0.989616 0.800865 8.37906e+07 0.00350222 1.85101e+07 1.33586e+07 1.84847e+07 229 1.85297e+07 1.31278e+07 0.00323036 1.86896e+07 50.2148 0.00664462 0.992344 0 49.9656 GTEX-RUSQ-0226-SM-47JWT 1 B1 2 aliquots, ~10x7mm. All cortex. Unusually well-preserved 9.4 Adrenal Gland Adrenal Gland 0002369 172 1279 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989525 389414 0.9756 0.992621 0.833039 22309 1 76 0.00223077 156 0 7.12591e+07 0.0241493 1.32695e+06 7.17888e+07 7.96562e+06 22326 3.54191e+07 0 0.142561 0.992621 0.826892 7.12591e+07 0.00271263 1.59213e+07 8.20301e+06 1.58771e+07 172 1.59395e+07 1.32342e+07 0.00247095 1.60703e+07 50.2044 0.0184841 0.995716 0 49.9304 GTEX-RUSQ-0326-SM-47JWS 1 B1 6 pieces, ~9x2mm. Several with layer of atherosis, up to 0.5mm in areas 7.9 Blood Vessel Artery - Aorta 0001496 177 1275 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98804 306282 0.977023 0.991297 0.838801 20429 1 76 0.00235186 135 0 6.50281e+07 0.0225936 218189 6.5599e+07 7.09717e+06 20441 3.22972e+07 0 0.138222 0.991297 0.831502 6.50281e+07 0.00290534 1.41871e+07 4.99238e+06 1.41954e+07 150 1.42562e+07 1.26395e+07 0.00262769 1.43345e+07 50.137 0.0033261 0.994554 0 50.0147 GTEX-RUSQ-0426-SM-47JWR 1 B1 4 pieces ~2.5mm d. Several with ~0.5mm discontinuous adherent fat; several with ~20% atherosclerotic narrowing 7.4 Blood Vessel Artery - Coronary 0001621 194 1260 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987492 305963 0.975038 0.990912 0.844221 21494 1 76 0.00235675 150 0 6.88593e+07 0.0246012 283881 6.94909e+07 7.37323e+06 21507 3.41981e+07 0 0.130817 0.990912 0.836548 6.88593e+07 0.00304918 1.49925e+07 5.63804e+06 1.50148e+07 166 1.50618e+07 1.27928e+07 0.00270177 1.51736e+07 50.1849 0.00408515 0.994332 0 50.0372 GTEX-RUSQ-0526-SM-2TF72 1 B1 2 aliquots, ~10x5mm. Mild ischemic changes, focal contraction banding noted 7.8 Heart Heart - Left Ventricle 0006566 197 1258 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.67266 79320 0.980087 0.675715 0.849818 18704 1 76 0.00453112 81 0 4.7502e+07 0.0189459 1.52745e+06 7.02988e+07 1.99131e+07 18708 2.33842e+07 0 0.13027 0.675715 0.574234 4.7502e+07 0.0120543 1.03069e+07 8.95352e+06 1.08756e+07 105 1.08367e+07 6.18059e+06 0.00827569 1.05239e+07 49.2677 0.0217279 0.67877 0 51.3424 GTEX-RUSQ-0526-SM-2TWCI 1 B1 2 aliquots, ~10x5mm. Mild ischemic changes, focal contraction banding noted 7.8 Heart Heart - Left Ventricle 0006566 197 1258 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-0626-SM-2TF5V 1 B1 2 aliquots, ~9x6mm. Minimal congestion/edema 8.4 Lung Lung 0008952 200 1256 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.69223 419102 0.947915 0.696856 0.757851 21856 1 76 0.00514141 96 0 4.38206e+07 0.0513161 291852 6.28833e+07 2.11475e+07 21872 2.15882e+07 0 0.190064 0.696856 0.528113 4.38206e+07 0.0139869 9.26512e+06 1.91559e+07 9.58295e+06 100 9.66699e+06 7.16412e+06 0.0095348 9.45638e+06 49.4493 0.00464117 0.701483 0 50.8431 GTEX-RUSQ-0626-SM-2TWD6 1 B1 2 aliquots, ~9x6mm. Minimal congestion/edema 8.4 Lung Lung 0008952 200 1256 BP-21930 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-0826-SM-47JWW 0 B1 6 pieces, ~7x3mm. Squamous mucosa well preserved, ~5-10% of thickness 9.6 Esophagus Esophagus - Mucosa 0006920 217 1242 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988635 341443 0.978582 0.991867 0.822748 22951 1 76 0.00242851 139 0 7.42426e+07 0.0209648 190417 7.48514e+07 8.31639e+06 22969 3.69002e+07 0 0.155834 0.991867 0.816056 7.42426e+07 0.00292472 1.67764e+07 9.98507e+06 1.67703e+07 156 1.68763e+07 1.58758e+07 0.0026758 1.69065e+07 50.0446 0.00254394 0.995098 0 49.9909 GTEX-RUSQ-0926-SM-47JWU 0 B1 6 pieces, ~7x4mm 8.8 Esophagus Esophagus - Muscularis 0004648 222 1238 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988498 427040 0.974148 0.991836 0.808452 22679 1 76 0.00231471 170 0 8.1606e+07 0.0256043 671096 8.22777e+07 8.9877e+06 22696 4.05432e+07 0 0.165696 0.991836 0.801851 8.1606e+07 0.00291392 1.79119e+07 8.08536e+06 1.78625e+07 201 1.79146e+07 1.43984e+07 0.0026133 1.81215e+07 50.2871 0.00815647 0.995174 0 49.9309 GTEX-RUSQ-1026-SM-2TF6V 1 B1 2 aliquots, ~1.5x7.5mm 6.3 Thyroid Thyroid 0002046 228 1233 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.565568 187929 0.954646 0.568188 0.714802 21933 1 76 0.00509527 95 0 4.25254e+07 0.0440664 638484 7.48438e+07 2.52397e+07 21950 2.08793e+07 0 0.239845 0.568188 0.406142 4.25254e+07 0.0137297 9.04432e+06 1.1134e+07 9.44390e+06 104 9.47112e+06 4.92310e+06 0.0093926 9.22638e+06 49.3455 0.00853089 0.570809 0 51.0806 GTEX-RUSQ-1026-SM-2TWD9 1 B1 2 aliquots, ~1.5x7.5mm 6.3 Thyroid Thyroid 0002046 228 1233 BP-21838 RNA isolation_PAXgene Tissue miRNA 01/26/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-1126-SM-EAZAU 1 B1 6 pieces, ~7.5x3mm. Mucosa up to 700microns thick, ~20-25% of thickness. Superficial 10% mucosa badly autolyzed; deeper is excellent. 5.5 Stomach Stomach 0000945 232 1230 BP-21934 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.992325 271914 0.976615 0.993214 0.83446 22479 1 76 0.00188132 278 0 8.74865e+07 0.0230422 524496 8.80842e+07 6.63874e+06 22499 4.36129e+07 0 0.142155 0.993214 0.828797 8.74865e+07 0.00280053 1.92265e+07 7.25984e+06 1.93338e+07 256 1.92945e+07 1.69646e+07 0.00234051 1.93409e+07 50.0601 0.00595448 0.994103 0 50.1391 GTEX-RUSQ-1526-SM-2TF62 0 B1 6 pieces ~9x4mm. Squamous epithelium is ~1% of thickness. 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 288 1178 BP-21934 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.38273 62704 0.963052 0.383624 0.771517 20744 1 76 0.00527815 102 0 3.03938e+07 0.0317709 257978 7.92281e+07 2.88323e+07 20749 1.47951e+07 0 0.191535 0.383624 0.295972 3.03938e+07 0.0155866 6.39742e+06 5.96973e+06 6.84625e+06 102 6.84992e+06 4.59188e+06 0.0104204 6.57497e+06 48.976 0.00325614 0.384517 0 51.6945 GTEX-RUSQ-1526-SM-2TWBQ 0 B1 6 pieces ~9x4mm. Squamous epithelium is ~1% of thickness. 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 288 1178 BP-21934 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-1626-SM-EZ6L4 0 B1 2 aliquots, ~13x10mm 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 292 1175 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988999 246557 0.97785 0.990521 0.815234 23201 1 76 0.00236436 276 0 9.74572e+07 0.0218199 899696 9.83898e+07 6.90887e+06 23230 4.85639e+07 0 0.162616 0.990521 0.807506 9.74572e+07 0.00368277 2.15267e+07 9.3933e+06 2.16395e+07 314 2.16273e+07 1.60482e+07 0.00302255 2.16755e+07 50.0557 0.0091442 0.992044 0 50.1306 GTEX-RUSQ-1726-SM-2TF68 0 B1 2 aliquots, ~11x7mm. Moderate interstitial fat. 8.1 Muscle Muscle - Skeletal 0011907 297 1171 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.459262 357698 0.935004 0.459933 0.784991 17478 1 76 0.00504149 105 0 3.1983e+07 0.063228 566658 6.95384e+07 2.49285e+07 17480 1.55962e+07 0 0.150013 0.459933 0.361043 3.1983e+07 0.0146643 6.41258e+06 1.84255e+07 6.87154e+06 107 6.80924e+06 4.95989e+06 0.00984587 6.52988e+06 48.9529 0.00814885 0.460604 0 51.7275 GTEX-RUSQ-1726-SM-2TWCJ 0 B1 2 aliquots, ~11x7mm. Moderate interstitial fat. 8.1 Muscle Muscle - Skeletal 0011907 297 1171 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_Affy_Batch7_Apr12 05/03/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-1826-SM-2TF6E 0 B1 2 aliquots, ~3.5mm d. LCACC note: One has adherent nubbin of fat ~2x1mm. 7.6 Nerve Nerve - Tibial 0001323 302 1167 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.853885 115621 0.96935 0.861069 0.75898 23076 1 76 0.00499479 124 0 6.28059e+07 0.0302643 194902 7.29395e+07 2.37879e+07 23102 3.09106e+07 0 0.21037 0.861069 0.653535 6.28059e+07 0.0131539 1.35663e+07 7.87114e+06 1.38565e+07 120 1.4036e+07 9.84684e+06 0.00904029 1.38851e+07 49.7297 0.00267211 0.868254 0 50.5291 GTEX-RUSQ-1826-SM-2XU9Q 0 B1 2 aliquots, ~3.5mm d. LCACC note: One has adherent nubbin of fat ~2x1mm. 7.6 Nerve Nerve - Tibial 0001323 302 1167 BP-21951 RNA isolation_PAXgene Tissue miRNA 01/30/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-1926-SM-2TF6K 0 B1 2 aliquots, ~3mm d. LDACC NOTE: Good clean specimens, no adipose tissue 7.9 Blood Vessel Artery - Tibial 0007610 303 1167 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.69435 163109 0.968484 0.69887 0.81134 20382 1 76 0.00503685 106 0 5.81235e+07 0.030635 313141 8.31678e+07 2.82066e+07 20393 2.85794e+07 0 0.157144 0.69887 0.567021 5.81235e+07 0.013938 1.22848e+07 9.8055e+06 1.27228e+07 107 1.28292e+07 1.03731e+07 0.00945864 1.25413e+07 49.4325 0.00376517 0.703389 0 50.8758 GTEX-RUSQ-1926-SM-2XUA4 0 B1 2 aliquots, ~3mm d. LDACC NOTE: Good clean specimens, no adipose tissue 7.9 Blood Vessel Artery - Tibial 0007610 303 1167 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RUSQ-2026-SM-4GIAK 0 B1 2 aliquots, ~9x9mm. All fibroadipose tissue; no ductal elements noted 6.9 Breast Breast - Mammary Tissue 0008367 317 1153 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.988843 375492 0.978125 0.99174 0.837278 22314 1 76 0.0022158 276 0 9.34937e+07 0.0216362 579571 9.42724e+07 9.06624e+06 22335 4.65016e+07 0 0.140847 0.99174 0.830362 9.34937e+07 0.00366282 2.07406e+07 9.1791e+06 2.07673e+07 288 2.08048e+07 1.56932e+07 0.00293719 2.09629e+07 50.1892 0.00614783 0.994637 0 50.0322 GTEX-RUSQ-2126-SM-47JXK 1 B1 2 aliquots, ~10x7mm. Reduced spermatogeneisis 6.5 Testis Testis 0000473 327 1144 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988183 383989 0.933389 0.990953 0.732967 31919 1 76 0.00242427 152 0 7.29039e+07 0.0663318 938189 7.35695e+07 7.81584e+06 31973 3.62368e+07 0 0.200422 0.990953 0.726336 7.29039e+07 0.00302 1.52882e+07 1.02761e+07 1.52119e+07 154 1.52795e+07 1.11202e+07 0.0027213 1.54085e+07 50.2102 0.0127524 0.993723 0 49.8749 GTEX-RVPU-0001-SM-2RXES C1 Blood Whole Blood 0013756 1244 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6992696029_R02C01 GTEX-RVPU-0001-SM-2XK36 C1 Blood Whole Blood 0013756 1244 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R04C01 GTEX-RVPU-0001-SM-4X62C C1 Blood Whole Blood 0013756 1244 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-RVPU-0001-SM-7DLFD C1 Blood Whole Blood 0013756 1244 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 LCSET-6363 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-RVPU-0005-SM-2TF6L C1 7.7 Blood Whole Blood 0013756 1244 BP-21696 RNA isolation_PAXgene Blood RNA (Manual) 01/24/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.488895 651387 0.913476 0.488294 0.688027 16796 1 76 0.0058557 83 0 3.73428e+07 0.0832128 103799 7.64761e+07 2.6143e+07 16798 1.82061e+07 0 0.22545 0.488294 0.335959 3.73428e+07 0.013627 7.88595e+06 7.34114e+07 8.42233e+06 106 8.23031e+06 7.34377e+06 0.00974615 8.05583e+06 49.4643 0.00135727 0.487693 0 51.6445 GTEX-RVPU-0005-SM-2XU97 C1 7.7 Blood Whole Blood 0013756 1244 BP-21696 RNA isolation_PAXgene Blood RNA (Manual) 01/24/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0008-SM-3NM8B C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1431 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 EXCLUDE 0.991827 665212 0.980849 0.993949 0.880833 21487 1 76 0.00348213 286 0 1.14662e+08 0.0188437 468650 1.1536e+08 2.22469e+07 21505 5.70745e+07 0 0.100016 0.993949 0.875503 1.14662e+08 0.00471604 2.55961e+07 1.64999e+07 2.56965e+07 278 2.57526e+07 3.03136e+07 0.00409777 2.57863e+07 50.0327 0.00406248 0.996072 0 50.0979 GTEX-RVPU-0011-R10A-SM-2XCAH C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.786443 190048 0.960475 0.790447 0.847859 22262 1 76 0.00241916 134 0 6.00089e+07 0.0391982 4.04802e+06 7.59178e+07 7.81707e+06 22276 2.97169e+07 0 0.112616 0.790447 0.670188 6.00089e+07 0.0115447 1.30195e+07 1.06818e+07 1.33391e+07 167 1.32967e+07 5.08355e+06 0.00695882 1.3322e+07 50.0474 0.0533211 0.79445 0 50.6062 GTEX-RVPU-0011-R10A-SM-2XU9G C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R11A-SM-2XCAF C1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.608523 177815 0.966513 0.610655 0.84865 20711 1 76 0.00244018 147 0 6.34133e+07 0.0324385 5.4449e+06 1.03845e+08 1.09159e+07 20723 3.13398e+07 0 0.117863 0.610655 0.518232 6.34133e+07 0.0120056 1.40009e+07 1.3213e+07 1.41918e+07 201 1.40568e+07 2.94554e+06 0.00720619 1.43165e+07 50.4576 0.052433 0.612786 0 50.3387 GTEX-RVPU-0011-R11A-SM-2XU9W C1, A1 7.5 Brain Brain - Cerebellar Hemisphere 0002037 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R1A-SM-2XCAI C1, A1 6.5 Brain Brain - Hippocampus 0001954 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.627749 168729 0.972356 0.632596 0.867782 19786 1 76 0.00237795 111 0 4.44708e+07 0.0271267 5.38975e+06 7.02989e+07 7.3474e+06 19793 2.1936e+07 0 0.104574 0.632596 0.548956 4.44708e+07 0.0120334 9.77447e+06 1.21233e+07 9.93865e+06 148 9.90354e+06 2.34141e+06 0.00716869 1.00744e+07 50.4275 0.0766691 0.637444 0 50.4164 GTEX-RVPU-0011-R1A-SM-2XUA7 C1, A1 6.5 Brain Brain - Hippocampus 0001954 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R2A-SM-2XCAG C1, A1 6.8 Brain Brain - Substantia nigra 0002038 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.407342 45250 0.966206 0.413334 0.859797 16622 1 76 0.00261872 104 0 1.44827e+07 0.0323772 1.38813e+06 3.50387e+07 4.74286e+06 16624 7.0829e+06 0 0.106409 0.413334 0.355383 1.44827e+07 0.0130873 3.14322e+06 3.03205e+06 3.27337e+06 121 3.3197e+06 784629 0.00777711 3.29998e+06 49.8511 0.0396171 0.419326 0 51.0141 GTEX-RVPU-0011-R2A-SM-2XU9N C1, A1 6.8 Brain Brain - Substantia nigra 0002038 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R3A-SM-2XCAE C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.962333 368231 0.969478 0.965582 0.866467 22536 1 76 0.002231 367 0 9.77557e+07 0.0303254 1.04622e+07 1.0124e+08 7.98802e+06 22556 4.85787e+07 0 0.103011 0.965582 0.836645 9.77557e+07 0.0106352 2.13558e+07 2.31863e+07 2.20323e+07 375 2.18744e+07 6.09597e+06 0.00641895 2.16961e+07 49.7955 0.10334 0.968831 0 50.7796 GTEX-RVPU-0011-R3A-SM-2XUA9 C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R4A-SM-2TF6X C1, A1 6.2 Brain Brain - Amygdala 0001876 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.377326 448457 0.916422 0.378581 0.784347 17310 1 76 0.00515391 89 0 2.99437e+07 0.079945 3.5498e+06 7.90947e+07 2.58876e+07 17311 1.46047e+07 0 0.132074 0.378581 0.296939 2.99437e+07 0.0154418 6.01495e+06 2.61906e+07 6.63292e+06 103 6.53416e+06 1.09406e+06 0.0102808 6.22527e+06 48.7895 0.0448804 0.379836 0 52.443 GTEX-RVPU-0011-R4A-SM-2XU9Y C1, A1 6.2 Brain Brain - Amygdala 0001876 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R4A-SM-5SI8K C1, A1 6.2 Brain Brain - Amygdala 0001876 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989192 355953 0.968739 0.992463 0.831417 19533 1 76 0.00183997 369 0 7.38081e+07 0.0311884 9.77692e+06 7.43686e+07 6.89087e+06 19539 3.67064e+07 0 0.137322 0.992463 0.825151 7.38081e+07 0.00332302 1.60125e+07 3.39826e+07 1.60641e+07 353 1.5648e+07 3.23037e+06 0.00257905 1.66147e+07 51.4981 0.131466 0.995735 0 50.0805 GTEX-RVPU-0011-R5A-SM-2XCAD C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.900922 237537 0.962876 0.905122 0.835746 23411 1 76 0.00238141 154 0 6.77178e+07 0.0368811 4.7873e+06 7.48162e+07 7.35814e+06 23433 3.35651e+07 0 0.12713 0.905122 0.756453 6.77178e+07 0.01172 1.47865e+07 1.3375e+07 1.49931e+07 203 1.49082e+07 5.65767e+06 0.00702903 1.51076e+07 50.3321 0.0639875 0.909323 0 50.3468 GTEX-RVPU-0011-R5A-SM-2XU9Z C1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R6A-SM-2XCAC C1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.633068 54737 0.978754 0.637995 0.887422 17383 1 76 0.00231446 113 0 3.12328e+07 0.0210873 3.79874e+06 4.89546e+07 1.45204e+07 17387 1.54332e+07 0 0.0913328 0.637995 0.566171 3.12328e+07 0.0118134 7.03606e+06 5.57056e+06 7.06378e+06 134 7.00926e+06 1.31003e+06 0.00702726 7.27975e+06 50.9465 0.0775973 0.642923 0 50.0983 GTEX-RVPU-0011-R6A-SM-2XU9I C1, A1 7.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R7A-SM-2XCAB C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.849987 183743 0.963921 0.852791 0.842953 21015 1 76 0.002395 129 0 5.29266e+07 0.0359393 4.81726e+06 6.20628e+07 5.6557e+06 21023 2.62683e+07 0 0.120968 0.852791 0.718863 5.29266e+07 0.0111889 1.15099e+07 1.02873e+07 1.19762e+07 153 1.17798e+07 3.59609e+06 0.00677751 1.18192e+07 50.0834 0.0776191 0.855595 0 50.9926 GTEX-RVPU-0011-R7A-SM-2XU9D C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R8A-SM-2TF74 C1, A1 6.3 Brain Brain - Hypothalamus 0001898 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.353285 229264 0.938617 0.352822 0.798952 18976 1 76 0.00505083 112 0 2.78335e+07 0.0575607 2.05615e+06 7.88882e+07 2.72033e+07 18980 1.35508e+07 0 0.139666 0.352822 0.281887 2.78335e+07 0.0150742 5.73408e+06 1.37123e+07 6.38150e+06 105 6.22629e+06 2.23734e+06 0.0100691 5.8994e+06 48.6521 0.0260641 0.352358 0 52.6719 GTEX-RVPU-0011-R8A-SM-2XU94 C1, A1 6.3 Brain Brain - Hypothalamus 0001898 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R8A-SM-5SI8I C1, A1 6.3 Brain Brain - Hypothalamus 0001898 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990379 422818 0.962303 0.99325 0.836814 21544 1 76 0.00187844 277 0 7.23168e+07 0.0375088 5.73044e+06 7.28083e+07 6.71353e+06 21560 3.59784e+07 0 0.125489 0.99325 0.831166 7.23168e+07 0.00324218 1.58785e+07 2.17595e+07 1.5902e+07 273 1.56434e+07 6.36979e+06 0.00255834 1.63208e+07 51.0596 0.0787058 0.996121 0 50.0369 GTEX-RVPU-0011-R9A-SM-2XUAM C1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-0011-R9A-SM-3NM8E C1, A1 7.6 Brain Brain - Spinal cord (cervical c-1) 0006469 1254 BP-22923 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-2351 12/16/2012 TruSeq.v1 EXCLUDE 0.978995 1.59152e+06 0.914113 0.981596 0.77156 20970 1 76 0.00395081 209 0 7.96601e+07 0.0854251 3.21758e+06 8.11536e+07 1.61992e+07 20987 3.96176e+07 0 0.142553 0.981596 0.75736 7.96601e+07 0.00529199 1.68534e+07 4.91545e+07 1.72601e+07 202 1.69491e+07 9.53936e+06 0.00461962 1.73647e+07 50.6056 0.039648 0.984197 0 50.5961 GTEX-RVPU-1526-SM-47JXQ 1 C1 2 aliquots, ~3mm d. Subtoally occlusive calcified atherosclerosis; also Monckeberg's medial sclerosis 5.9 Blood Vessel Artery - Tibial 0007610 1416 1337 BP-22263 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-2974 04/11/2013 TruSeq.v1 EXCLUDE 0.986662 266618 0.969304 0.98969 0.794657 22518 1 76 0.0025446 141 0 6.64883e+07 0.0304321 292373 6.71809e+07 7.7173e+06 22548 3.3023e+07 0 0.174647 0.98969 0.786465 6.64883e+07 0.00311681 1.43494e+07 7.48724e+06 1.44153e+07 157 1.44521e+07 1.08409e+07 0.00282983 1.45105e+07 50.1008 0.00435203 0.992718 0 50.1146 GTEX-RVPU-2226-SM-2XCAQ 1 C1 6 pieces, ~7x2.5mm. Squamous epithelium is ~1-2% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1431 1327 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.973962 160999 0.974456 0.97697 0.81235 24206 1 76 0.00245514 230 0 1.16818e+08 0.0251895 691869 1.19572e+08 8.98344e+06 24252 5.80324e+07 0 0.162106 0.97697 0.793641 1.16818e+08 0.0108222 2.54481e+07 1.23018e+07 2.562e+07 248 2.56916e+07 1.9694e+07 0.00662579 2.57071e+07 50.015 0.0057862 0.979977 0 50.1683 GTEX-RVPU-2226-SM-2XU9A 1 C1 6 pieces, ~7x2.5mm. Squamous epithelium is ~1-2% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1431 1327 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-2326-SM-2TF6R 1 C1 2 aliquots, ~7x5mm. NOTE: ~50% of one is vessel and fibrous tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1434 1325 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.492679 65223 0.966792 0.495001 0.772333 21161 1 76 0.0050822 111 0 3.86988e+07 0.0317808 208532 7.81793e+07 2.70018e+07 21180 1.89808e+07 0 0.194459 0.495001 0.382306 3.86988e+07 0.0142037 8.22492e+06 6.32895e+06 8.6248e+06 108 8.64546e+06 6.04343e+06 0.00962157 8.39937e+06 49.2781 0.00266736 0.497324 0 51.1866 GTEX-RVPU-2326-SM-2XU8D 1 C1 2 aliquots, ~7x5mm. NOTE: ~50% of one is vessel and fibrous tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1434 1325 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-2426-SM-2XCAR 1 C1 2 aliquots, ~9x7mm. Moderte interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 1435 1324 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.623214 97539 0.980406 0.624973 0.865418 20157 1 76 0.00220838 146 0 8.51276e+07 0.0185789 680199 1.3621e+08 1.25218e+07 20169 4.21935e+07 0 0.114988 0.624973 0.540863 8.51276e+07 0.0113532 1.84252e+07 9.30307e+06 1.87541e+07 174 1.88027e+07 1.69103e+07 0.0067679 1.86346e+07 49.7756 0.00499375 0.626732 0 50.4423 GTEX-RVPU-2426-SM-2XU9M 1 C1 2 aliquots, ~9x7mm. Moderte interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 1435 1324 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPU-2426-SM-CYKV9 1 C1 2 aliquots, ~9x7mm. Moderte interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 1435 1324 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 RIP-Seq GTEX-RVPV-0003-SM-2RXEQ D1 Blood Whole Blood 0013756 1401 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 GTEx_5Mbatch5_March12 05/02/2012 Illumina OMNI SNP Array OMNI 6992696029_R01C01 GTEX-RVPV-0003-SM-2XK35 D1 Blood Whole Blood 0013756 1401 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R02C02 GTEX-RVPV-0003-SM-3USSI D1 Blood Whole Blood 0013756 1401 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-RVPV-0003-SM-6UH3S D1 Blood Whole Blood 0013756 1401 BP-21655 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/23/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-RVPV-0006-SM-2TF6Q D1 8 Blood Whole Blood 0013756 1401 BP-21696 RNA isolation_PAXgene Blood RNA (Manual) 01/24/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.70655 1.34777e+06 0.894768 0.709508 0.675663 17600 1 76 0.00585195 86 0 4.84323e+07 0.102449 261753 6.82618e+07 2.14491e+07 17606 2.3834e+07 0 0.219105 0.709508 0.479388 4.84323e+07 0.0131577 1.01652e+07 1.14752e+08 1.05653e+07 103 1.05e+07 1.01238e+07 0.00948958 1.03931e+07 49.7442 0.00383455 0.712466 0 50.965 GTEX-RVPV-0006-SM-2XUA6 D1 8 Blood Whole Blood 0013756 1401 BP-21696 RNA isolation_PAXgene Blood RNA (Manual) 01/24/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-0008-SM-47JYW D1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1410 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98915 649697 0.980004 0.992689 0.876134 20014 1 76 0.00208593 180 0 8.04318e+07 0.0196617 145071 8.10242e+07 9.356e+06 20025 3.99718e+07 0 0.10387 0.992689 0.869728 8.04318e+07 0.00258868 1.79791e+07 1.14678e+07 1.79205e+07 175 1.80549e+07 2.15975e+07 0.00233641 1.81293e+07 50.1028 0.00179047 0.996228 0 49.9184 GTEX-RVPV-0011-R11A-SM-2TF6F D1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.865853 501785 0.931386 0.869927 0.690456 23701 1 76 0.00538116 103 0 7.43756e+07 0.0680184 1.29808e+06 8.54964e+07 2.51406e+07 23747 3.67758e+07 0 0.24093 0.869927 0.600646 7.43756e+07 0.0120324 1.57052e+07 2.62565e+07 1.59166e+07 128 1.60421e+07 8.56266e+06 0.00869123 1.5886e+07 49.7555 0.0151828 0.874001 0 50.3342 GTEX-RVPV-0011-R11A-SM-2XU98 D1, A1 6 Brain Brain - Cerebellar Hemisphere 0002037 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-0011-R3A-SM-2TF63 D1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.733817 758045 0.921515 0.737651 0.772761 23017 1 76 0.00509904 106 0 5.68701e+07 0.0776301 2.75846e+06 7.70962e+07 2.37601e+07 23032 2.80397e+07 0 0.148754 0.737651 0.570028 5.68701e+07 0.0131295 1.17365e+07 3.73574e+07 1.22709e+07 122 1.22499e+07 5.54747e+06 0.00909342 1.20115e+07 49.5086 0.0357794 0.741485 0 51.1129 GTEX-RVPV-0011-R3A-SM-2XUAE D1, A1 6.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-0011-R5A-SM-2TF69 D1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.387844 376704 0.910882 0.387016 0.740142 20364 1 76 0.00522701 82 0 2.45623e+07 0.0858869 1.08309e+06 6.34659e+07 1.99795e+07 20371 1.19714e+07 0 0.17074 0.387016 0.286447 2.45623e+07 0.0145537 4.94605e+06 1.95713e+07 5.39038e+06 98 5.29370e+06 2.11338e+06 0.00990036 5.02886e+06 48.7171 0.0170657 0.386187 0 52.1493 GTEX-RVPV-0011-R5A-SM-2XUAC D1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 1407 BP-22921 RNA isolation_PAXgene Tissue miRNA 03/07/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-0126-SM-EAZAW 1 D1 6 pieces up to 11x5 mm; 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1410 1401 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.984799 251248 0.977447 0.985847 0.848909 22703 1 76 0.00197524 161 0 6.89126e+07 0.0223509 361577 6.99019e+07 5.13306e+06 22723 3.43245e+07 0 0.128538 0.985847 0.836894 6.89126e+07 0.00334475 1.52205e+07 7.74583e+06 1.53688e+07 175 1.52691e+07 1.26173e+07 0.00265927 1.53962e+07 50.2072 0.00517263 0.986895 0 50.2423 GTEX-RVPV-0226-SM-2TF6W 1 D1 2 pieces ~ 4x2 mm; ~40% peripheral adipose 7.3 Blood Vessel Artery - Tibial 0007610 1417 1394 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.725459 105945 0.969478 0.729357 0.811419 21471 1 76 0.00499654 114 0 5.9582e+07 0.0295617 302054 8.1691e+07 2.6385e+07 21492 2.93624e+07 0 0.158059 0.729357 0.591814 5.9582e+07 0.0129083 1.24382e+07 8.03407e+06 1.29272e+07 114 1.29897e+07 1.01074e+07 0.00893129 1.2685e+07 49.4068 0.00369752 0.733256 0 50.9639 GTEX-RVPV-0226-SM-2XU9L 1 D1 2 pieces ~ 4x2 mm; ~40% peripheral adipose 7.3 Blood Vessel Artery - Tibial 0007610 1417 1394 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-0526-SM-47JYL 1 D1 6 pieces up to 6x3 mm; very good mucosa preservation; moderate venous congestion 6.1 Esophagus Esophagus - Mucosa 0006920 1442 1369 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.985971 263245 0.97227 0.989643 0.808292 22906 1 76 0.00249034 193 0 7.47645e+07 0.0275228 809239 7.5547e+07 8.15535e+06 22928 3.71316e+07 0 0.163978 0.989643 0.79992 7.47645e+07 0.00309175 1.6698e+07 9.06136e+06 1.66799e+07 204 1.67426e+07 9.98786e+06 0.00278993 1.69021e+07 50.2371 0.0107117 0.993315 0 49.973 GTEX-RVPV-0926-SM-47JXU 1 D1 2 pieces, 13x8 & 11x8 mm; 5.9 Muscle Muscle - Skeletal 0011907 1461 1350 BP-21954 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-2974 04/11/2013 TruSeq.v1 EXCLUDE 0.985211 178268 0.983673 0.988442 0.885245 19227 1 76 0.00225719 262 0 7.1336e+07 0.0162305 3.31269e+06 7.21702e+07 8.04355e+06 19234 3.54602e+07 0 0.0984277 0.988442 0.875013 7.1336e+07 0.00296535 1.643e+07 1.02739e+07 1.59007e+07 273 1.59336e+07 7.15398e+06 0.00261011 1.66025e+07 51.028 0.0459011 0.991673 0 49.1814 GTEX-RVPV-1126-SM-EAZAV 2 D1 2 pieces, 13x6 &11x9 mm; spermatogenesis; 4x3 mm rete testis at one pole; 3x1.5 mm capsule in other piece 5.5 Testis Testis 0000473 1471 1341 BP-21957 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.99062 776803 0.905396 0.991646 0.705851 33961 1 76 0.00213173 219 0 1.0065e+08 0.0942498 1.16816e+06 1.01498e+08 8.07235e+06 34026 5.01601e+07 0 0.199546 0.991646 0.699954 1.0065e+08 0.00299873 2.00885e+07 3.24373e+07 2.03593e+07 246 2.03761e+07 1.57055e+07 0.00256478 2.01657e+07 49.7405 0.0115092 0.992671 0 50.3347 GTEX-RVPV-1226-SM-2TF73 2 D1 2 pieces, 10x10 & 10x8 mm; 7.3 Thyroid Thyroid 0002046 1475 1346 BP-21957 RNA isolation_PAXgene Tissue miRNA 01/31/2012 LCSET-1480 06/02/2012 TruSeq.v1 RNASEQ 0.706629 199947 0.95704 0.709406 0.767553 22698 1 76 0.00487646 115 0 4.67677e+07 0.0415842 185631 6.59252e+07 1.83561e+07 22721 2.3035e+07 0 0.189487 0.709406 0.544507 4.67677e+07 0.0122047 9.96747e+06 1.14348e+07 1.0335e+07 115 1.03652e+07 7.7524e+06 0.00852623 1.0136e+07 49.4409 0.00281578 0.712184 0 50.905 GTEX-RVPV-1226-SM-2XUAG 2 D1 2 pieces, 10x10 & 10x8 mm; 7.3 Thyroid Thyroid 0002046 1475 1346 BP-21957 RNA isolation_PAXgene Tissue miRNA 01/31/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-1526-SM-EXOHF 1 D1 2 pieces, 13x10 & 11x10 mm; well fixed 5.5 Adipose Tissue Adipose - Subcutaneous 0002190 1412 1409 BP-22259 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.984171 324108 0.97538 0.986234 0.820074 23040 1 76 0.00203816 209 0 8.7061e+07 0.0243173 766435 8.82762e+07 4.92209e+06 23067 4.33109e+07 0 0.155305 0.986234 0.808785 8.7061e+07 0.00353006 1.91151e+07 8.09281e+06 1.93351e+07 247 1.92766e+07 1.38718e+07 0.00278255 1.93431e+07 50.0862 0.00868224 0.988297 0 50.2861 GTEX-RVPV-1726-SM-2NKAQ 2 D1 2 pieces, 9x8 & 8x7 mm; moderate patchy recent hemorrhages and congestion 6.93433 Lung Lung 0008952 1423 1398 BP-22263,BP-22264,BP-95175,BP-95176 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-10314 01/27/2017 TruSeq.v1 RNASEQ 0.973686 427691 0.975566 0.983738 0.720269 23756 1 76 0.00284494 134 0 6.98886e+07 0.0239855 279087 7.10439e+07 5.06738e+06 23797 3.44668e+07 0 0.255297 0.983738 0.708556 6.98886e+07 0.00523173 1.54348e+07 8.65565e+06 1.54584e+07 148 1.58157e+07 1.04004e+07 0.00402614 1.57649e+07 49.9195 0.00392838 0.993791 0 50.0382 GTEX-RVPV-1726-SM-2TF5W 2 D1 2 pieces, 9x8 & 8x7 mm; moderate patchy recent hemorrhages and congestion 6.9 Lung Lung 0008952 1423 1398 BP-22263 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-1480 06/02/2012 TruSeq.v1 EXCLUDE 0.286314 81919 0.957761 0.286187 0.674336 19698 1 76 0.00559968 101 0 1.92431e+07 0.038213 97555 6.72396e+07 2.32437e+07 19705 9.30464e+06 0 0.283425 0.286187 0.192986 1.92431e+07 0.0158075 4.0364e+06 6.1964e+06 4.41799e+06 106 4.34682e+06 2.58747e+06 0.0107059 4.14056e+06 48.7849 0.00145086 0.286059 0 52.2568 GTEX-RVPV-1726-SM-2XU8R 2 D1 2 pieces, 9x8 & 8x7 mm; moderate patchy recent hemorrhages and congestion 6.9 Lung Lung 0008952 1423 1398 BP-22263 RNA isolation_PAXgene Tissue miRNA 02/08/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RVPV-1726-SM-5SI8C 2 D1 2 pieces, 9x8 & 8x7 mm; moderate patchy recent hemorrhages and congestion 6.9 Lung Lung 0008952 1423 1398 BP-22263 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.987704 269856 0.975787 0.990832 0.714589 23276 1 76 0.00237264 132 0 6.55212e+07 0.0237608 248094 6.61275e+07 6.31946e+06 23308 3.25306e+07 0 0.261199 0.990832 0.708038 6.55212e+07 0.00368345 1.45634e+07 8.18224e+06 1.46369e+07 146 1.46658e+07 9.41202e+06 0.00302598 1.47357e+07 50.1189 0.00375175 0.993961 0 50.1258 GTEX-RVPV-2526-SM-EYYVL 3 D1 2 pieces, 8x8 & 8x7 mm; hyperplastic; autolysis varies from 2 to 3 5.6 Prostate Prostate 0002367 1478 1348 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.97511 153602 0.969618 0.977587 0.793328 24544 1 76 0.00227472 203 0 7.84648e+07 0.0300884 1.46772e+06 8.02637e+07 3.03281e+06 24581 3.90142e+07 0 0.17629 0.977587 0.775548 7.84648e+07 0.00346377 1.73311e+07 8.63906e+06 1.75796e+07 235 1.75527e+07 1.01865e+07 0.00286774 1.75433e+07 49.9866 0.0182863 0.980063 0 50.3559 GTEX-RWS6-0001-SM-3NMAL B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 102 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 EXCLUDE 0.990947 995001 0.96344 0.993053 0.805749 22674 1 76 0.00387149 216 0 1.10217e+08 0.0360303 503025 1.10988e+08 2.12152e+07 22704 5.48252e+07 0 0.157691 0.993053 0.800151 1.10217e+08 0.0049644 2.4422e+07 2.29112e+07 2.44116e+07 241 2.45416e+07 2.34216e+07 0.00441679 2.45283e+07 49.9864 0.00453223 0.995158 0 49.9893 GTEX-RWS6-0004-SM-2RXEY B1 Blood Whole Blood 0013756 102 BP-21741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2012 GTEx_5Mbatch5_March12 05/03/2012 Illumina OMNI SNP Array OMNI 6992629005_R01C01 GTEX-RWS6-0004-SM-2XK2T B1 Blood Whole Blood 0013756 102 BP-21741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R03C01 GTEX-RWS6-0004-SM-3USSB B1 Blood Whole Blood 0013756 102 BP-21741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-RWS6-0004-SM-5JK3Z B1 Blood Whole Blood 0013756 102 BP-21741 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/24/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-RWS6-0005-SM-2XCAN B1 9 Blood Whole Blood 0013756 102 BP-21792 RNA isolation_PAXgene Blood RNA (Manual) 01/25/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.698877 670221 0.946359 0.701983 0.76937 19323 1 76 0.00283454 114 0 7.02129e+07 0.0527086 233009 1.00021e+08 9.79537e+06 19334 3.47421e+07 0 0.176989 0.701983 0.540084 7.02129e+07 0.0126359 1.51276e+07 5.95962e+07 1.54471e+07 131 1.55528e+07 1.38225e+07 0.00771354 1.53426e+07 49.6599 0.00232961 0.705089 0 50.5225 GTEX-RWS6-0005-SM-2XU9T B1 9 Blood Whole Blood 0013756 102 BP-21792 RNA isolation_PAXgene Blood RNA (Manual) 01/25/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-0008-SM-47JYV B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 234 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.990592 457450 0.974845 0.993306 0.863003 19949 1 76 0.00211581 159 0 6.93339e+07 0.0247614 305272 6.98012e+07 7.7677e+06 19958 3.44816e+07 0 0.111842 0.993306 0.857226 6.93339e+07 0.00247088 1.53517e+07 1.13209e+07 1.53201e+07 153 1.53842e+07 1.69588e+07 0.00229286 1.54813e+07 50.1572 0.00437345 0.99602 0 49.9485 GTEX-RWS6-0226-SM-2XCA9 1 B1 2 pieces, 8x8 & 9x6 mm; patchy dilated air spaces 8.1 Lung Lung 0008952 138 978 BP-22259 RNA isolation_PAXgene Tissue miRNA 02/08/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.838021 117779 0.970541 0.840669 0.777351 23835 1 76 0.00250396 139 0 7.12702e+07 0.0289918 347382 8.4778e+07 7.13961e+06 23863 3.5269e+07 0 0.19319 0.840669 0.653495 7.12702e+07 0.0117837 1.56929e+07 6.2063e+06 1.58489e+07 156 1.58442e+07 1.13707e+07 0.00712921 1.59147e+07 50.111 0.00409755 0.843317 0 50.2474 GTEX-RWS6-0226-SM-2XUAO 1 B1 2 pieces, 8x8 & 9x6 mm; patchy dilated air spaces 8.1 Lung Lung 0008952 138 978 BP-22259 RNA isolation_PAXgene Tissue miRNA 02/08/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-0326-SM-2XCAP 0 B1 2 pieces, 8x7 mm each; 8 Heart Heart - Left Ventricle 0006566 143 974 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.908827 120662 0.983488 0.913548 0.852615 21042 1 76 0.00220981 200 0 9.19416e+07 0.0163396 2.82974e+06 1.00642e+08 9.2117e+06 21056 4.5582e+07 0 0.130873 0.913548 0.778905 9.19416e+07 0.0114586 2.01436e+07 1.46965e+07 2.03494e+07 240 2.03223e+07 1.12183e+07 0.0068103 2.05033e+07 50.2217 0.0281168 0.918268 0 50.2541 GTEX-RWS6-0326-SM-2XUAF 0 B1 2 pieces, 8x7 mm each; 8 Heart Heart - Left Ventricle 0006566 143 974 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-0426-SM-47JXH 1 B1 2 pieces ~ 2 mm arteries; 1 has a 60% narrowing by atheromatous plaque; both surrounded by ~20% adipose 6.3 Blood Vessel Artery - Coronary 0001621 150 968 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986455 288992 0.973939 0.990045 0.832286 20914 1 76 0.00230866 159 0 7.25333e+07 0.0258318 471450 7.32627e+07 7.76795e+06 20929 3.60281e+07 0 0.141653 0.990045 0.824001 7.25333e+07 0.0029876 1.5856e+07 6.37586e+06 1.58701e+07 183 1.58625e+07 1.22802e+07 0.0026469 1.61161e+07 50.3965 0.00643507 0.993634 0 50.0223 GTEX-RWS6-0526-SM-4GIAJ 1 B1 6 pieces up to 10x2 mm; 6.6 Blood Vessel Artery - Aorta 0001496 155 963 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987085 331792 0.971328 0.989875 0.861061 21447 1 76 0.00222251 206 0 7.97185e+07 0.0284326 211452 8.05339e+07 8.10804e+06 21464 3.96338e+07 0 0.110267 0.989875 0.852343 7.97185e+07 0.00358186 1.71537e+07 7.08973e+06 1.72916e+07 223 1.7261e+07 1.34006e+07 0.00290027 1.74051e+07 50.2078 0.00262563 0.992666 0 50.2001 GTEX-RWS6-0626-SM-2XCAS 1 B1 2 pieces, 10x7 & 10x9 mm 6.7 Thyroid Thyroid 0002046 160 959 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.892431 305486 0.955617 0.897663 0.714408 24430 1 76 0.00243031 122 0 7.37543e+07 0.0441609 452334 8.21625e+07 7.58088e+06 24480 3.65235e+07 0 0.24121 0.897663 0.641297 7.37543e+07 0.0118717 1.58336e+07 1.35244e+07 1.60089e+07 143 1.6146e+07 9.49871e+06 0.00712347 1.60868e+07 49.908 0.00550536 0.902894 0 50.2753 GTEX-RWS6-0626-SM-2XUAT 1 B1 2 pieces, 10x7 & 10x9 mm 6.7 Thyroid Thyroid 0002046 160 959 BP-22343 RNA isolation_PAXgene Tissue miRNA 02/10/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-0726-SM-47JXI 1 B1 6 pieces up to 8x4 mm; 8.8 Esophagus Esophagus - Muscularis 0004648 172 948 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988983 307871 0.97655 0.992106 0.836089 21478 1 76 0.00232877 162 0 6.98729e+07 0.0231522 581253 7.04289e+07 8.05953e+06 21495 3.47296e+07 0 0.140461 0.992106 0.829489 6.98729e+07 0.00270676 1.52053e+07 6.58348e+06 1.51477e+07 167 1.51969e+07 1.2826e+07 0.00251717 1.53644e+07 50.274 0.00825305 0.995229 0 49.9051 GTEX-RWS6-0826-SM-47JXF 0 B1 6 pieces up to 5x4 mm; 9.9 Esophagus Esophagus - Mucosa 0006920 174 946 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987225 411938 0.974263 0.991042 0.813506 21862 1 76 0.0024552 137 0 6.69797e+07 0.0254806 362135 6.75851e+07 7.30003e+06 21879 3.32642e+07 0 0.160758 0.991042 0.806218 6.69797e+07 0.00322754 1.50907e+07 9.72749e+06 1.50172e+07 147 1.51153e+07 1.33788e+07 0.00283988 1.52451e+07 50.2139 0.00535821 0.994859 0 49.878 GTEX-RWS6-0926-SM-47JXE 1 B1 6 pieces up to 9x4.5 mm; good oxyntic mucosa 6.9 Stomach Stomach 0000945 178 943 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.984809 219266 0.981772 0.988471 0.866045 20762 1 76 0.00234519 270 0 6.65243e+07 0.0180667 1.27669e+06 6.73002e+07 7.6287e+06 20773 3.30497e+07 0 0.115728 0.988471 0.85606 6.65243e+07 0.00294577 1.51386e+07 4.86618e+07 1.5234e+07 214 1.52502e+07 1.24146e+07 0.00264437 1.5346e+07 50.1565 0.0189701 0.992133 0 50.157 GTEX-RWS6-1026-SM-47JXD 1 B1 2 pieces, 9x6 & 8x7 mm; atrophic, a few corpora albicans 8.2 Ovary Ovary 0000992 181 941 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989495 355636 0.969779 0.992363 0.744124 22660 1 76 0.00239616 136 0 6.93699e+07 0.0299715 122901 6.99038e+07 7.74379e+06 22690 3.44863e+07 0 0.225655 0.992363 0.738441 6.93699e+07 0.00294652 1.53107e+07 7.85377e+06 1.53486e+07 149 1.54162e+07 1.14723e+07 0.00267054 1.54398e+07 50.0382 0.00175814 0.99523 0 50.0618 GTEX-RWS6-1126-SM-47JXC 1 B1 2 pieces, 9x8 & 8x7 mm; ~20-40% adipose in and around parenchyma 7.2 Pancreas Pancreas 0001150 184 938 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988352 318354 0.975634 0.991593 0.837603 21498 1 76 0.00250432 100 0 6.98396e+07 0.0241585 269144 7.04318e+07 7.81133e+06 21513 3.47138e+07 0 0.138031 0.991593 0.830561 6.98396e+07 0.00317703 1.60138e+07 1.93079e+07 1.60969e+07 110 1.60969e+07 2.00243e+07 0.00283958 1.62447e+07 50.2286 0.00382134 0.994834 0 50.1293 GTEX-RWS6-1326-SM-47JXB 1 B1 2 pieces, 7x6 & 7x6 mm; both without glands 7.5 Uterus Uterus 0000995 197 927 BP-22345 RNA isolation_PAXgene Tissue miRNA 02/10/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988885 273378 0.966456 0.991673 0.787553 23230 1 76 0.00235 132 0 6.35864e+07 0.0332799 126350 6.41203e+07 6.84445e+06 23252 3.16098e+07 0 0.178903 0.991673 0.780995 6.35864e+07 0.00279718 1.385e+07 7.40063e+06 1.38947e+07 141 1.39267e+07 1.16924e+07 0.00257296 1.39956e+07 50.1234 0.00197051 0.99446 0 50.0805 GTEX-RWS6-1726-SM-47JXP 1 B1 6 pieces up to 7x5 mm; 5 have atrophic epithelium; 1 without epithelium 7.3 Vagina Vagina 0000996 220 908 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988795 286119 0.970984 0.99144 0.798922 23264 1 76 0.00249502 132 0 6.17734e+07 0.028565 190639 6.23068e+07 6.7112e+06 23286 3.07088e+07 0 0.172062 0.99144 0.792083 6.17734e+07 0.00293159 1.36466e+07 6.18966e+06 1.36276e+07 141 1.36649e+07 1.09439e+07 0.00271273 1.37693e+07 50.1901 0.00305968 0.994085 0 49.9651 GTEX-RWS6-1826-SM-47JXX 1 B1 6 pieces up to 9x5 mm; 3 pieces have mucosa, 3 (thicker) others are all muscle 7.6 Colon Colon - Transverse 0001157 226 903 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98946 298221 0.976081 0.992401 0.832647 22197 1 76 0.00234382 206 0 8.20627e+07 0.0236589 771190 8.26911e+07 9.58851e+06 22218 4.07981e+07 0 0.143434 0.992401 0.826319 8.20627e+07 0.00276402 1.78876e+07 7.65569e+06 1.7819e+07 233 1.7854e+07 1.39002e+07 0.0025533 1.80827e+07 50.3182 0.00932616 0.995342 0 49.9039 GTEX-RWS6-1926-SM-47JXY 1 B1 2 pieces, each 11x8 mm; atrophic with a few ducts; >90% and ~80% adipose 7.3 Breast Breast - Mammary Tissue 0008367 231 899 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989626 294181 0.970314 0.992082 0.791618 24157 1 76 0.00254392 143 0 7.1166e+07 0.0290022 284834 7.1734e+07 7.64416e+06 24178 3.53714e+07 0 0.178696 0.992082 0.78535 7.1166e+07 0.00302447 1.56481e+07 7.12582e+06 1.56355e+07 162 1.56827e+07 1.21186e+07 0.0027836 1.57716e+07 50.1412 0.0039707 0.994538 0 49.9798 GTEX-RWS6-2026-SM-2XCB5 1 B1 6 pieces up to 8x4 mm; large holes in the dermis of the thicker pieces (unfixed?) 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 235 895 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.941688 125783 0.970239 0.945867 0.803328 24057 1 76 0.00243778 180 0 8.52047e+07 0.0295363 526830 9.00811e+07 8.28143e+06 24084 4.227e+07 0 0.166911 0.945867 0.759841 8.52047e+07 0.0114999 1.84665e+07 8.80264e+06 1.86681e+07 190 1.87195e+07 1.33777e+07 0.00694882 1.87657e+07 50.0616 0.0058484 0.950045 0 50.2714 GTEX-RWS6-2026-SM-2XU8X 1 B1 6 pieces up to 8x4 mm; large holes in the dermis of the thicker pieces (unfixed?) 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 235 895 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-2126-SM-2XCAV 1 B1 2 pieces, 9x9 & 8X8 mm; ~20% adipose among the muscle bundles 8 Muscle Muscle - Skeletal 0011907 239 892 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.880901 136711 0.980128 0.885906 0.867324 20481 1 76 0.00221971 141 0 7.95706e+07 0.019619 957960 8.98183e+07 9.05937e+06 20495 3.94263e+07 0 0.112804 0.885906 0.768368 7.95706e+07 0.0112589 1.71474e+07 8.55491e+06 1.73434e+07 172 1.7463e+07 1.51444e+07 0.00671375 1.74283e+07 49.9503 0.0106655 0.890912 0 50.2843 GTEX-RWS6-2126-SM-2XU95 1 B1 2 pieces, 9x9 & 8X8 mm; ~20% adipose among the muscle bundles 8 Muscle Muscle - Skeletal 0011907 239 892 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-2326-SM-2XCB4 1 B1 2 pieces, 3x2 mm each; a 1 mm adipose nodule at the edge of 1 piece 7.2 Blood Vessel Artery - Tibial 0007610 245 887 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.793827 115848 0.971539 0.798121 0.803227 21853 1 76 0.00243742 145 0 8.09515e+07 0.0279576 496391 1.01428e+08 9.63519e+06 21882 4.00606e+07 0 0.168312 0.798121 0.641072 8.09515e+07 0.0114096 1.73226e+07 6.59706e+06 1.75254e+07 165 1.76682e+07 1.35406e+07 0.00689939 1.75848e+07 49.8816 0.00489404 0.802415 0 50.291 GTEX-RWS6-2326-SM-2XU8O 1 B1 2 pieces, 3x2 mm each; a 1 mm adipose nodule at the edge of 1 piece 7.2 Blood Vessel Artery - Tibial 0007610 245 887 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWS6-2426-SM-2XCB9 1 B1 2 pieces, 6x3 mm each; ~20% adipose within and around nerves 7 Nerve Nerve - Tibial 0001323 246 887 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.931352 154914 0.966279 0.935964 0.742387 24867 1 76 0.00247923 200 0 9.90508e+07 0.033419 413541 1.05828e+08 1.12785e+07 24921 4.90832e+07 0 0.223892 0.935964 0.694847 9.90508e+07 0.0113895 2.16507e+07 8.96921e+06 2.18661e+07 204 2.19937e+07 1.41484e+07 0.00691243 2.19769e+07 49.9809 0.00390769 0.940576 0 50.2475 GTEX-RWS6-2426-SM-2XU8G 1 B1 2 pieces, 6x3 mm each; ~20% adipose within and around nerves 7 Nerve Nerve - Tibial 0001323 246 887 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0003-SM-2VCTT C1 Blood Whole Blood 0013756 1096 BP-21791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428021_R02C01 GTEX-RWSA-0003-SM-2XK2E C1 Blood Whole Blood 0013756 1096 BP-21791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R02C01 GTEX-RWSA-0003-SM-4X61Z C1 Blood Whole Blood 0013756 1096 BP-21791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-RWSA-0003-SM-5JK4L C1 Blood Whole Blood 0013756 1096 BP-21791 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-RWSA-0005-SM-2XCAO C1 9 Blood Whole Blood 0013756 1096 BP-21792 RNA isolation_PAXgene Blood RNA (Manual) 01/25/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.79152 422480 0.962567 0.795504 0.714898 19075 1 76 0.00292042 118 0 5.74095e+07 0.0368172 137674 7.21675e+07 7.26565e+06 19091 2.84187e+07 0 0.247668 0.795504 0.568704 5.74095e+07 0.0124901 1.27402e+07 3.97138e+07 1.29493e+07 133 1.30673e+07 1.02098e+07 0.00768128 1.29141e+07 49.7051 0.0019077 0.799487 0 50.407 GTEX-RWSA-0005-SM-2XU8W C1 9 Blood Whole Blood 0013756 1096 BP-21792 RNA isolation_PAXgene Blood RNA (Manual) 01/25/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0008-SM-47JYX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1285 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.991465 591783 0.97978 0.994021 0.875184 19614 1 76 0.00201036 160 0 7.35729e+07 0.0198995 148833 7.40154e+07 7.82501e+06 19622 3.65959e+07 0 0.104595 0.994021 0.869952 7.35729e+07 0.00229383 1.65157e+07 1.0042e+07 1.64798e+07 162 1.65644e+07 1.93369e+07 0.00215173 1.66191e+07 50.0824 0.00201084 0.996577 0 49.9456 GTEX-RWSA-0126-SM-2XCBB 0 C1 6 pieces ~6.5x2.5mm. Squamous epithelium is ~1-3% of thickness 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1284 1425 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.465246 58903 0.968825 0.466298 0.798266 20660 1 76 0.00256791 163 0 3.25413e+07 0.0296525 150984 6.97865e+07 6.96194e+06 20671 1.60262e+07 0 0.170559 0.466298 0.37223 3.25413e+07 0.0124911 6.94349e+06 4.22e+06 7.18535e+06 144 7.19763e+06 5.46661e+06 0.00751834 7.03198e+06 49.4179 0.00216351 0.467349 0 50.8559 GTEX-RWSA-0126-SM-2XU9X 0 C1 6 pieces ~6.5x2.5mm. Squamous epithelium is ~1-3% of thickness 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1284 1425 BP-22521 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0226-SM-2XCBA 1 C1 2 aliquots, ~9x5mm 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 1287 1423 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.463672 81916 0.970322 0.465191 0.795686 21238 1 76 0.00254466 129 0 4.04566e+07 0.0283804 231472 8.69678e+07 9.03788e+06 21252 1.98913e+07 0 0.174635 0.465191 0.370146 4.04566e+07 0.012446 8.71399e+06 4.89396e+06 8.97099e+06 138 9.00623e+06 6.29715e+06 0.0074792 8.83851e+06 49.5301 0.00266158 0.466709 0 50.7266 GTEX-RWSA-0526-SM-2XCBC 0 C1 2 aliquots, ~1.5mm in d. Good, clean specimens, no adherent fat 7.9 Blood Vessel Artery - Tibial 0007610 1333 1379 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.973307 168682 0.974892 0.976516 0.833649 23414 1 76 0.00228897 379 0 1.39696e+08 0.0246824 623572 1.43056e+08 1.15994e+07 23453 6.93792e+07 0 0.141243 0.976516 0.814071 1.39696e+08 0.0108821 2.98428e+07 1.15983e+07 2.99453e+07 364 2.99949e+07 2.65576e+07 0.0065714 3.01975e+07 50.1683 0.00435894 0.979724 0 50.0857 GTEX-RWSA-0526-SM-2XU8U 0 C1 2 aliquots, ~1.5mm in d. Good, clean specimens, no adherent fat 7.9 Blood Vessel Artery - Tibial 0007610 1333 1379 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0626-SM-2XCBD 1 C1 2 aliquots, ~9x6mm, mild interstitial fibrosis 7.3 Heart Heart - Left Ventricle 0006566 1335 1377 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.912981 167400 0.97957 0.91516 0.836812 21720 1 76 0.00220687 246 0 1.01784e+08 0.0202211 3.77722e+06 1.1122e+08 7.85534e+06 21748 5.05482e+07 0 0.142758 0.91516 0.765817 1.01784e+08 0.0105245 2.28206e+07 1.1227e+07 2.2505e+07 272 2.25265e+07 1.14957e+07 0.00635579 2.29645e+07 50.4815 0.0339617 0.917339 0 49.6519 GTEX-RWSA-0626-SM-2XU9U 1 C1 2 aliquots, ~9x6mm, mild interstitial fibrosis 7.3 Heart Heart - Left Ventricle 0006566 1335 1377 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0726-SM-2XCBE 0 C1 2 aliquots, ~10x5mm, essentially no interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 1349 1364 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.78524 149977 0.982134 0.787223 0.872765 19580 1 76 0.00216354 128 0 7.2985e+07 0.0175358 933899 9.27121e+07 8.49297e+06 19590 3.6124e+07 0 0.109369 0.787223 0.68706 7.2985e+07 0.0115911 1.59696e+07 7.66859e+06 1.58103e+07 162 1.57838e+07 1.43707e+07 0.00686543 1.6152e+07 50.5764 0.0100731 0.789205 0 49.7493 GTEX-RWSA-0826-SM-2XCBF 1 C1 2 aliquots, ~7x7mm 6 Thyroid Thyroid 0002046 1350 1364 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.907138 247216 0.962037 0.910201 0.738447 24619 1 76 0.00246538 189 0 9.96103e+07 0.0376588 700410 1.09438e+08 1.1772e+07 24667 4.94467e+07 0 0.22359 0.910201 0.672135 9.96103e+07 0.0108007 2.16695e+07 1.39405e+07 2.17916e+07 206 2.18596e+07 1.16176e+07 0.006619 2.19052e+07 50.0521 0.00640008 0.913264 0 50.1405 GTEX-RWSA-0826-SM-2XUAA 1 C1 2 aliquots, ~7x7mm 6 Thyroid Thyroid 0002046 1350 1364 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-0926-SM-47JXW 1 C1 6 pieces, ~7.5x1.2 mm 8.1 Blood Vessel Artery - Aorta 0001496 1352 1363 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987972 443922 0.968531 0.990913 0.778925 22394 1 76 0.00259967 160 0 7.79507e+07 0.0310275 126944 7.86655e+07 8.64339e+06 22420 3.87038e+07 0 0.189605 0.990913 0.771847 7.79507e+07 0.0030933 1.67372e+07 7.9143e+06 1.67501e+07 172 1.68365e+07 1.37936e+07 0.00284575 1.68732e+07 50.0545 0.00161372 0.993855 0 50.0193 GTEX-RWSA-1126-SM-2XCAZ 1 C1 2 aliquots, ~9x6mm. Fairly well preserved, minimal congestion 8.3 Lung Lung 0008952 1356 1361 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.704439 85184 0.970098 0.709513 0.724459 23055 1 76 0.00272147 117 0 5.42231e+07 0.0294882 177421 7.6423e+07 6.95113e+06 23081 2.67548e+07 0 0.245638 0.709513 0.514013 5.42231e+07 0.0118185 1.18262e+07 5.18559e+06 1.19788e+07 124 1.21229e+07 7.87523e+06 0.00723744 1.20493e+07 49.8479 0.00232157 0.714587 0 50.3204 GTEX-RWSA-1126-SM-2XU92 1 C1 2 aliquots, ~9x6mm. Fairly well preserved, minimal congestion 8.3 Lung Lung 0008952 1356 1361 BP-22523 RNA isolation_PAXgene Tissue miRNA 02/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-RWSA-1326-SM-47JX9 1 C1 6 pieces, ~5.5x1.5mm 6.8 Esophagus Esophagus - Muscularis 0004648 1359 1360 BP-22527 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988716 259022 0.97158 0.991364 0.790234 22919 1 76 0.00247531 154 0 7.34319e+07 0.0281816 531297 7.40716e+07 8.16864e+06 22949 3.65019e+07 0 0.181346 0.991364 0.783409 7.34319e+07 0.00297005 1.57144e+07 6.36411e+06 1.57347e+07 173 1.57597e+07 1.15428e+07 0.00272202 1.58739e+07 50.1805 0.00717275 0.994011 0 50.0322 GTEX-RWSA-1426-SM-47JXA 1 C1 2 aliquots, ~7x6mm. Fairly well preserved, minimal fat 6.4 Liver Liver 0001114 1361 1358 BP-22527 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.984982 324872 0.976435 0.989177 0.838306 20753 1 76 0.00240265 266 0 8.19421e+07 0.0234155 1.23136e+06 8.28387e+07 9.7322e+06 20771 4.06804e+07 0 0.138129 0.989177 0.829233 8.19421e+07 0.00316702 1.82255e+07 1.18242e+07 1.81754e+07 256 1.82035e+07 1.17441e+07 0.00278321 1.85185e+07 50.4289 0.0148645 0.993372 0 49.9312 GTEX-RWSA-1726-SM-47JX7 1 C1 2 aliquots, ~16x3mm. All cortex 7.1 Adrenal Gland Adrenal Gland 0002369 1369 1352 BP-22527 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-3181 07/18/2013 TruSeq.v1 RNASEQ 0.990543 576930 0.968934 0.991462 0.764867 22069 1 76 0.00226043 372 0 1.20814e+08 0.0308739 2.43705e+06 1.21854e+08 9.1401e+06 22107 6.01914e+07 0 0.204067 0.991462 0.758336 1.20814e+08 0.00276161 2.60809e+07 1.94222e+07 2.63872e+07 375 2.63493e+07 1.43276e+07 0.00251079 2.62318e+07 49.8883 0.0199997 0.992381 0 50.2919 GTEX-RWSA-2026-SM-47JX8 1 C1 2 aliquots, ~9x7mm. Diffuse glandular hyperplasia. Mucosa unusually well-preserved 6.1 Prostate Prostate 0002367 1376 1347 BP-22527 RNA isolation_PAXgene Tissue miRNA 02/15/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986935 275793 0.959809 0.989668 0.719877 25710 1 76 0.0026031 202 0 8.91215e+07 0.0399642 564543 9.00519e+07 1.02003e+07 25753 4.42905e+07 0 0.239932 0.989668 0.71244 8.91215e+07 0.00306222 1.94195e+07 9.61288e+06 1.94869e+07 234 1.95452e+07 1.07558e+07 0.00283203 1.96e+07 50.07 0.00626908 0.992401 0 50.0866 GTEX-RWSA-2426-SM-47JXR 1 C1 2 aliquots, ~8x5mm. Spermatogenesis visible but appears slightly reduced 6.9 Testis Testis 0000473 1383 1343 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987326 364002 0.933715 0.990378 0.736721 31864 1 76 0.00254507 145 0 6.98081e+07 0.066001 867942 7.04863e+07 8.17792e+06 31920 3.4696e+07 0 0.196994 0.990378 0.729632 6.98081e+07 0.00304429 1.4693e+07 1.02944e+07 1.46569e+07 146 1.4742e+07 1.08454e+07 0.00279391 1.48047e+07 50.1062 0.0123136 0.993431 0 49.9386 GTEX-S32W-0001-SM-2VCTS B1 Blood Whole Blood 0013756 -130 BP-21842 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428020_R01C01 GTEX-S32W-0001-SM-2XK2F B1 Blood Whole Blood 0013756 -130 BP-21842 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R04C02 GTEX-S32W-0001-SM-3USSK B1 Blood Whole Blood 0013756 -130 BP-21842 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-S32W-0001-SM-5JK4N B1 Blood Whole Blood 0013756 -130 BP-21842 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S32W-0004-SM-2XCE9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -130 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.960826 311957 0.974294 0.968078 0.86704 21066 1 76 0.00274408 152 0 8.06873e+07 0.0252766 578912 8.33479e+07 9.08292e+06 21083 3.99469e+07 0 0.107254 0.968078 0.839363 8.06873e+07 0.0130632 1.79125e+07 1.28381e+07 1.80075e+07 157 1.82478e+07 1.96762e+07 0.007865 1.82546e+07 50.0093 0.00694573 0.975331 0 50.1322 GTEX-S32W-0004-SM-2XUAW B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -130 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-0004-SM-5S2SG B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -130 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0006-SM-2XCAK B1 7.8 Blood Whole Blood 0013756 -130 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.860894 502967 0.969526 0.865702 0.781912 14549 1 76 0.00239078 83 0 6.24892e+07 0.0271949 54450 7.21833e+07 6.81305e+06 14550 3.08856e+07 0 0.187614 0.865702 0.676902 6.24892e+07 0.0126297 1.45372e+07 1.31598e+08 1.50243e+07 128 1.50631e+07 1.75309e+07 0.0074818 1.48602e+07 49.6611 0.000754329 0.87051 0 50.8239 GTEX-S32W-0006-SM-2XU8J B1 7.8 Blood Whole Blood 0013756 -130 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-0006-SM-5S2SW B1 7.8 Blood Whole Blood 0013756 -130 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0126-SM-4AD61 1 B1 2 pieces 9x7 & 8x6 mm; ~10% adipose 9.1 Adrenal Gland Adrenal Gland 0002369 228 989 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.9921 331854 0.97406 0.99388 0.812671 23358 1 76 0.00187278 159 0 7.47765e+07 0.0256441 647177 7.52369e+07 5.08038e+06 23377 3.72503e+07 0 0.161389 0.99388 0.807698 7.47765e+07 0.00250291 1.65613e+07 8.31774e+06 1.66435e+07 179 1.67029e+07 1.35937e+07 0.00218728 1.66267e+07 49.8856 0.00860185 0.995661 0 50.1238 GTEX-S32W-0326-SM-2XCBI 1 B1 2 pieces 11x4 & 9x8 mm; patchy pneumonia ~10%; 7.5 Lung Lung 0008952 237 982 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.94263 198939 0.971664 0.947087 0.785256 25247 1 76 0.0024711 183 0 1.0397e+08 0.0279832 473180 1.09779e+08 9.26139e+06 25279 5.15572e+07 0 0.186408 0.947087 0.743706 1.0397e+08 0.0113927 2.28894e+07 9.89357e+06 2.3076e+07 218 2.31939e+07 1.57905e+07 0.00691092 2.32293e+07 50.0381 0.0043103 0.951544 0 50.203 GTEX-S32W-0326-SM-2XUAN 1 B1 2 pieces 11x4 & 9x8 mm; patchy pneumonia ~10%; 7.5 Lung Lung 0008952 237 982 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-0326-SM-5S2T4 1 B1 2 pieces 11x4 & 9x8 mm; patchy pneumonia ~10%; 7.5 Lung Lung 0008952 237 982 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0426-SM-4AD6H 1 B1 6 pieces up to 8x1.5 mm; no peripheral adipose 7.7 Blood Vessel Artery - Aorta 0001496 245 974 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991751 294122 0.973457 0.993646 0.828867 21523 1 76 0.00186091 142 0 6.78667e+07 0.0261904 213216 6.83007e+07 4.12552e+06 21542 3.37906e+07 0 0.14459 0.993646 0.823601 6.78667e+07 0.00255868 1.47186e+07 5.19957e+06 1.47458e+07 162 1.47593e+07 1.251e+07 0.00220913 1.48294e+07 50.1185 0.00312173 0.995541 0 50.0461 GTEX-S32W-0526-SM-4AD6F 1 B1 2 pieces ~3.5 mm; mild intimal thickening; <5% peripheral adipose 8.1 Blood Vessel Artery - Coronary 0001621 257 963 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991521 264567 0.974788 0.993475 0.84427 21300 1 76 0.00183097 133 0 6.02926e+07 0.0248766 247930 6.06885e+07 3.71913e+06 21314 3.002e+07 0 0.130517 0.993475 0.838762 6.02926e+07 0.00254736 1.30482e+07 4.59169e+06 1.30942e+07 145 1.30854e+07 1.18e+07 0.00218846 1.31718e+07 50.1646 0.00408529 0.99543 0 50.0878 GTEX-S32W-0626-SM-2XCBG 1 B1 2 pieces 10x8 & 7x7 mm; 8.6 Heart Heart - Left Ventricle 0006566 264 957 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.967511 189252 0.981382 0.971498 0.854745 22320 1 76 0.00205478 268 0 1.17103e+08 0.0183672 3.47339e+06 1.20538e+08 9.61009e+06 22345 5.81284e+07 0 0.126636 0.971498 0.830384 1.17103e+08 0.0111239 2.61139e+07 1.39521e+07 2.62051e+07 306 2.61772e+07 1.80023e+07 0.00657075 2.65187e+07 50.324 0.0288157 0.975486 0 50.0871 GTEX-S32W-0626-SM-2XUA5 1 B1 2 pieces 10x8 & 7x7 mm; 8.6 Heart Heart - Left Ventricle 0006566 264 957 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-0626-SM-5S2TC 1 B1 2 pieces 10x8 & 7x7 mm; 8.6 Heart Heart - Left Ventricle 0006566 264 957 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0726-SM-2XCBL 1 B1 2 pieces 13x5 & 9x5 mm; 2 hyperplastic foci 7.2 Thyroid Thyroid 0002046 278 943 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.600139 79981 0.962992 0.610494 0.758854 22045 1 76 0.00267564 109 0 3.60781e+07 0.0367656 284814 5.90966e+07 7.51267e+06 22058 1.76136e+07 0 0.204139 0.610494 0.463276 3.60781e+07 0.0127902 7.74346e+06 4.73277e+06 7.82202e+06 116 8.05994e+06 4.92132e+06 0.00764716 8.072e+06 50.0374 0.00481946 0.620848 0 50.2523 GTEX-S32W-0726-SM-2XUAY 1 B1 2 pieces 13x5 & 9x5 mm; 2 hyperplastic foci 7.2 Thyroid Thyroid 0002046 278 943 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-0726-SM-5S2T3 1 B1 2 pieces 13x5 & 9x5 mm; 2 hyperplastic foci 7.2 Thyroid Thyroid 0002046 278 943 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0826-SM-4AD5Z 1 B1 2 pieces 13x6 & 11x7 mm; good preservation; focal scarring; 50% peripheral adipose in one, 40% peripheral and internal adipose in the other 7.3 Pancreas Pancreas 0001150 287 935 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990304 371445 0.969742 0.99241 0.793727 22854 1 76 0.00203059 124 0 7.33646e+07 0.0300266 263643 7.39257e+07 5.09461e+06 22887 3.65231e+07 0 0.176015 0.99241 0.787702 7.33646e+07 0.002755 1.65987e+07 1.35406e+07 1.66916e+07 137 1.67188e+07 1.67671e+07 0.00239203 1.67289e+07 50.0152 0.00356632 0.994516 0 50.1395 GTEX-S32W-0826-SM-5S2SI 1 B1 2 pieces 13x6 & 11x7 mm; good preservation; focal scarring; 50% peripheral adipose in one, 40% peripheral and internal adipose in the other 7.3 Pancreas Pancreas 0001150 287 935 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-0926-SM-4AD5X 0 B1 6 pieces up to 9x2 mm; there are also 2 slightly attached pieces of muscularis propria 9.2 Esophagus Esophagus - Mucosa 0006920 304 921 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991208 262760 0.975542 0.992867 0.812786 21797 1 76 0.00203957 136 0 6.4821e+07 0.024225 246412 6.52867e+07 4.22778e+06 21815 3.22995e+07 0 0.162756 0.992867 0.806988 6.4821e+07 0.00271037 1.46286e+07 9.06665e+06 1.46565e+07 144 1.46899e+07 1.29138e+07 0.00237441 1.46976e+07 50.013 0.0037743 0.994526 0 50.0476 GTEX-S32W-1026-SM-4AD5W 1 B1 6 pieces up to 10x4 mm; 8 Esophagus Esophagus - Muscularis 0004648 305 920 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989419 272522 0.97541 0.991132 0.829608 21916 1 76 0.00188493 161 0 7.08726e+07 0.0243323 679600 7.15067e+07 4.72757e+06 21934 3.53031e+07 0 0.145802 0.991132 0.822251 7.08726e+07 0.00241242 1.53968e+07 6.74871e+06 1.54959e+07 183 1.54761e+07 1.20843e+07 0.00214822 1.55314e+07 50.0891 0.009504 0.992844 0 50.1604 GTEX-S32W-1126-SM-4AD5V 1 B1 6 pieces up to 11x5 mm; only 1 piece has mucosa, but a very small area; the others are all muscle 8 Bladder Bladder 0001255 315 911 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991789 288384 0.975846 0.993614 0.827869 21999 1 76 0.00183299 129 0 6.14833e+07 0.02387 411789 6.18784e+07 3.79977e+06 22016 3.06171e+07 0 0.147977 0.993614 0.822582 6.14833e+07 0.00253225 1.3441e+07 5.1556e+06 1.35095e+07 147 1.35057e+07 1.1401e+07 0.00218198 1.35543e+07 50.0897 0.00665481 0.995439 0 50.1271 GTEX-S32W-1226-SM-4AD67 0 B1 2 pieces 9x8 & 7x7 mm; atrophic; lots of corpora albicans 6.5 Ovary Ovary 0000992 322 905 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990406 260451 0.964658 0.992059 0.739558 23084 1 76 0.00194081 145 0 7.05365e+07 0.0351231 218241 7.11011e+07 4.57083e+06 23123 3.51319e+07 0 0.2251 0.992059 0.733685 7.05365e+07 0.00263026 1.54715e+07 8.75959e+06 1.54776e+07 153 1.54958e+07 1.20054e+07 0.00228496 1.55701e+07 50.1195 0.00306944 0.993712 0 50.0098 GTEX-S32W-1326-SM-4AD5Q 1 B1 2 pieces 5x4 & 5x3 mm; good epithelium; one has 60% vessels and fibromuscular stroma 6.8 Fallopian Tube Fallopian Tube 0003889 324 903 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990819 329571 0.956802 0.99264 0.728488 24837 1 76 0.00203331 121 0 6.04065e+07 0.0429617 164150 6.08543e+07 3.86430e+06 24874 3.00729e+07 0 0.228313 0.99264 0.723127 6.04065e+07 0.00273155 1.31408e+07 6.47183e+06 1.31629e+07 133 1.31771e+07 9.06301e+06 0.00238179 1.32327e+07 50.1053 0.00269742 0.994461 0 50.0421 GTEX-S32W-1426-SM-4AD66 1 B1 2 pieces 11x7 & 8x7 mm; one piece has proliferative endometrium; other has no glands 7.3 Uterus Uterus 0000995 331 898 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992912 304126 0.968919 0.994386 0.781893 23291 1 76 0.00196374 160 0 7.55414e+07 0.030818 147852 7.59679e+07 5.01236e+06 23315 3.76398e+07 0 0.187025 0.994386 0.777504 7.55414e+07 0.00253429 1.65e+07 7.73087e+06 1.65834e+07 170 1.65923e+07 1.35424e+07 0.00224859 1.66011e+07 50.0133 0.00194624 0.995859 0 50.1261 GTEX-S32W-1526-SM-4AD6Z 1 B1 4 pieces up to 7.5x5 mm; all have squamous component; one has some cervical glands 6.6 Cervix Uteri Cervix - Ectocervix 0012249 342 887 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990782 322927 0.971425 0.992592 0.806861 22877 1 76 0.0019242 142 0 6.78082e+07 0.0282974 167736 6.83142e+07 4.35462e+06 22895 3.37632e+07 0 0.164564 0.992592 0.800884 6.78082e+07 0.00267189 1.4891e+07 7.21927e+06 1.49758e+07 159 1.49726e+07 1.25356e+07 0.00229736 1.50191e+07 50.0775 0.00245536 0.994403 0 50.142 GTEX-S32W-1626-SM-4AD6G 2 B1 4 pieces up to 7x4 mm; all endocervix 6.6 Cervix Uteri Cervix - Endocervix 0000458 347 883 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990496 344247 0.972672 0.99256 0.817551 23102 1 76 0.00193441 158 0 7.32965e+07 0.027028 193191 7.38459e+07 4.72306e+06 23121 3.64789e+07 0 0.155122 0.99256 0.811468 7.32965e+07 0.00269218 1.61116e+07 7.00735e+06 1.61572e+07 172 1.6174e+07 1.39036e+07 0.00231251 1.62489e+07 50.1155 0.00261614 0.994624 0 50.0707 GTEX-S32W-1926-SM-4AD63 1 B1 2 pieces 10x7 & 8x7 mm; large area of hemorrhage in each: 10 and 25% of specimen 7.3 Liver Liver 0001114 363 871 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.99174 359566 0.97829 0.993701 0.855925 21598 1 76 0.00206817 161 0 7.75427e+07 0.0202192 418355 7.80342e+07 4.94349e+06 21613 3.85644e+07 0 0.122365 0.993701 0.850533 7.75427e+07 0.00271504 1.7082e+07 1.06399e+07 1.70608e+07 187 1.71347e+07 1.61622e+07 0.00239097 1.71547e+07 50.0292 0.00536117 0.995662 0 49.9688 GTEX-S32W-2026-SM-4AD6E 1 B1 2 pieces 10x8 & 9x7 mm; atrophic; one large duct, several small ductal units; ~50% adipose content 6.6 Breast Breast - Mammary Tissue 0008367 377 857 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990463 285641 0.97391 0.992297 0.820818 23141 1 76 0.00198593 204 0 7.83701e+07 0.02577 478588 7.89785e+07 5.08773e+06 23166 3.90288e+07 0 0.153092 0.992297 0.814495 7.83701e+07 0.00270359 1.73015e+07 8.71305e+06 1.73578e+07 216 1.73717e+07 1.23916e+07 0.0023441 1.74282e+07 50.0813 0.00605973 0.994131 0 50.0813 GTEX-S32W-2126-SM-2XCB1 1 B1 6 pieces up to 9x3 mm; up to 1.8 mm of subcutaneous adipose; trim visible fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 393 842 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.967314 169158 0.973164 0.97042 0.800604 24367 1 76 0.00240567 244 0 1.17764e+08 0.0264545 518180 1.21354e+08 1.00127e+07 24411 5.84925e+07 0 0.17256 0.97042 0.776922 1.17764e+08 0.0108122 2.57005e+07 1.22922e+07 2.57757e+07 250 2.58854e+07 2.03042e+07 0.00659546 2.59401e+07 50.0528 0.00427 0.973526 0 50.073 GTEX-S32W-2126-SM-2XU8S 1 B1 6 pieces up to 9x3 mm; up to 1.8 mm of subcutaneous adipose; trim visible fat 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 393 842 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-2226-SM-2XCAY 1 B1 2 pieces 15x14 & 13x11 mm; central holes of unfixed tissue up to 5.7 mm; aliquots too large 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 395 841 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.795958 214536 0.970093 0.800171 0.810375 22824 1 76 0.00244149 143 0 7.13925e+07 0.0294373 382457 8.92215e+07 9.03575e+06 22847 3.53432e+07 0 0.159718 0.800171 0.648439 7.13925e+07 0.0115766 1.55385e+07 1.07171e+07 1.57675e+07 157 1.58924e+07 1.13038e+07 0.00698502 1.57735e+07 49.8121 0.0042866 0.804385 0 50.3658 GTEX-S32W-2226-SM-5S2S7 1 B1 2 pieces 15x14 & 13x11 mm; central holes of unfixed tissue up to 5.7 mm; aliquots too large 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 395 841 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-2326-SM-2XCAW 1 B1 2 pieces 12x8 & 8x8 mm; minimal adipose; tissue cracking (may be histologic) 8.1 Muscle Muscle - Skeletal 0011907 399 837 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.941632 161815 0.97855 0.945945 0.856808 21388 1 76 0.00217101 185 0 1.0075e+08 0.0212441 897212 1.06507e+08 9.6826e+06 21403 4.99757e+07 0 0.121742 0.945945 0.810493 1.0075e+08 0.0115592 2.22318e+07 1.05286e+07 2.23408e+07 226 2.23805e+07 1.90205e+07 0.00684369 2.26051e+07 50.2496 0.00842398 0.950258 0 50.1222 GTEX-S32W-2326-SM-2XU9H 1 B1 2 pieces 12x8 & 8x8 mm; minimal adipose; tissue cracking (may be histologic) 8.1 Muscle Muscle - Skeletal 0011907 399 837 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-2326-SM-5S2S6 1 B1 2 pieces 12x8 & 8x8 mm; minimal adipose; tissue cracking (may be histologic) 8.1 Muscle Muscle - Skeletal 0011907 399 837 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-S32W-2426-SM-2XCAT 0 B1 2 pieces 2.4x1.2 & 1.4x1.8 mm; mostly fat free 7.2 Blood Vessel Artery - Tibial 0007610 419 820 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.846075 110475 0.971995 0.849333 0.825652 22236 1 76 0.00233075 142 0 8.1821e+07 0.0276449 376892 9.63356e+07 8.41505e+06 22258 4.05616e+07 0 0.146342 0.849333 0.701253 8.1821e+07 0.0111213 1.7534e+07 6.55781e+06 1.76418e+07 172 1.76989e+07 1.45081e+07 0.00670917 1.77627e+07 50.0899 0.00391228 0.85259 0 50.1531 GTEX-S32W-2426-SM-2XU8T 0 B1 2 pieces 2.4x1.2 & 1.4x1.8 mm; mostly fat free 7.2 Blood Vessel Artery - Tibial 0007610 419 820 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S32W-2526-SM-2XCB8 0 B1 2 pieces 4x2 & 4x1.5 mm; no extraneous fat 7.3 Nerve Nerve - Tibial 0001323 417 821 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.439038 42174 0.96585 0.450108 0.772692 20641 1 76 0.00293341 124 0 2.39694e+07 0.0337938 122262 5.32525e+07 7.69931e+06 20653 1.15459e+07 0 0.193158 0.450108 0.347795 2.39694e+07 0.0140923 5.09086e+06 2.81187e+06 5.2025e+06 120 5.44406e+06 3.79691e+06 0.00837565 5.39353e+06 49.7669 0.00229589 0.461178 0 50.5423 GTEX-S32W-2526-SM-2XU8Y 0 B1 2 pieces 4x2 & 4x1.5 mm; no extraneous fat 7.3 Nerve Nerve - Tibial 0001323 417 821 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-0004-SM-2VCTX C1 Blood Whole Blood 0013756 168 BP-21846,BP-21847 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428021_R04C01 GTEX-S33H-0004-SM-2XK2J C1 Blood Whole Blood 0013756 168 BP-21846,BP-21847 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164003_R06C01 GTEX-S33H-0004-SM-4SVPL C1 Blood Whole Blood 0013756 168 BP-21846,BP-21847 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S33H-0004-SM-5JK2W C1 Blood Whole Blood 0013756 168 BP-21846,BP-21847 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/26/2012 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S33H-0005-SM-2XCAL C1 8.7 Blood Whole Blood 0013756 168 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.586865 297429 0.96613 0.587845 0.786371 18845 1 76 0.00266368 127 0 4.94151e+07 0.0325453 226748 8.40614e+07 7.8144e+06 18856 2.44216e+07 0 0.179759 0.587845 0.462264 4.94151e+07 0.013013 1.10296e+07 3.41222e+07 1.12908e+07 154 1.1315e+07 1.00664e+07 0.0078297 1.11348e+07 49.5986 0.00269741 0.588824 0 50.5852 GTEX-S33H-0005-SM-2XU96 C1 8.7 Blood Whole Blood 0013756 168 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-0008-SM-4AD6C C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 235 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992239 405710 0.974966 0.994269 0.864752 20104 1 76 0.00168433 146 0 6.56888e+07 0.0246718 276847 6.60674e+07 4.18068e+06 20117 3.2718e+07 0 0.110214 0.994269 0.859796 6.56888e+07 0.00234727 1.44982e+07 1.03341e+07 1.45889e+07 147 1.46361e+07 1.61105e+07 0.00201512 1.45867e+07 49.9154 0.00419037 0.9963 0 50.1559 GTEX-S33H-0126-SM-4AD62 1 C1 1 pieces 8x6 & 6x5 mm; reduced spermatogenesis 7.7 Testis Testis 0000473 190 993 BP-22609 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990768 325361 0.936457 0.99254 0.734036 31817 1 76 0.00203796 142 0 7.08738e+07 0.0632682 956760 7.14065e+07 4.49935e+06 31864 3.52979e+07 0 0.202422 0.99254 0.72856 7.08738e+07 0.00273715 1.50578e+07 8.59002e+06 1.50858e+07 148 1.51471e+07 1.14059e+07 0.00238693 1.51114e+07 49.941 0.0133988 0.994313 0 50.0464 GTEX-S33H-0326-SM-4AD6N 0 C1 2 pieces 9x9 & 8x7 mm; several foci of mammary ducts in abundant fibroadipose tissue 6 Breast Breast - Mammary Tissue 0008367 209 975 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.987262 284620 0.952071 0.989242 0.791545 25277 1 76 0.00228963 160 0 7.34766e+07 0.0476971 483322 7.42756e+07 4.79246e+06 25303 3.65742e+07 0 0.160526 0.989242 0.783029 7.34766e+07 0.00300417 1.57752e+07 7.08993e+06 1.58544e+07 184 1.58645e+07 1.08391e+07 0.00264618 1.59039e+07 50.0619 0.00650714 0.991221 0 50.1253 GTEX-S33H-0526-SM-2XCBK 1 C1 2 pieces 7x6 & 7x5 mm; <10% internal adipose 6.4 Heart Heart - Left Ventricle 0006566 218 968 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.216661 19160 0.974984 0.217834 0.841635 16412 1 76 0.0026024 94 0 1.38347e+07 0.0202518 999350 6.35105e+07 7.07563e+06 16414 6.66113e+06 0 0.133349 0.217834 0.183337 1.38347e+07 0.0152682 3.02901e+06 2.35602e+06 3.17696e+06 126 3.19923e+06 888867 0.0089012 3.11600e+06 49.3411 0.0157352 0.219007 0 51.192 GTEX-S33H-0526-SM-2XUAH 1 C1 2 pieces 7x6 & 7x5 mm; <10% internal adipose 6.4 Heart Heart - Left Ventricle 0006566 218 968 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-0526-SM-5SI83 1 C1 2 pieces 7x6 & 7x5 mm; <10% internal adipose 6.4 Heart Heart - Left Ventricle 0006566 218 968 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.986002 194090 0.983394 0.990077 0.831851 20421 1 76 0.0018093 368 0 8.92278e+07 0.0165334 7.56125e+06 9.01221e+07 8.34292e+06 20430 4.43582e+07 0 0.151543 0.990077 0.823597 8.92278e+07 0.00320257 1.95814e+07 3.86211e+07 1.94194e+07 353 1.93349e+07 6.26545e+06 0.00250307 1.99421e+07 50.7729 0.0839 0.994152 0 49.7923 GTEX-S33H-0526-SM-COH1W 1 C1 2 pieces 7x6 & 7x5 mm; <10% internal adipose 6.4 Heart Heart - Left Ventricle 0006566 218 968 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.992757 248444 0.982987 0.994207 0.850407 20724 1 76 0.00309632 367 0 9.67346e+07 0.0169371 8.41201e+06 9.72983e+07 9.08579e+06 20740 4.82172e+07 0 0.13258 0.994207 0.845481 9.67346e+07 0.00395673 2.13837e+07 2.79149e+07 2.16316e+07 364 2.15864e+07 6.69993e+06 0.0035259 2.15241e+07 49.9278 0.0864559 0.995657 0 50.2882 GTEX-S33H-0626-SM-2XCBJ 1 C1 2 pieces 7x6 & 7x5 mm; moderate venous congestion; moderate alveolar fluid; no pneumonia 7.8 Lung Lung 0008952 220 966 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.966825 236025 0.974547 0.971527 0.793483 25276 1 76 0.00251815 175 0 1.0821e+08 0.0250852 483820 1.11381e+08 9.40022e+06 25315 5.36234e+07 0 0.181064 0.971527 0.77089 1.0821e+08 0.0115006 2.39582e+07 1.12979e+07 2.40843e+07 212 2.42647e+07 1.94837e+07 0.00698762 2.42725e+07 50.0081 0.00434382 0.97623 0 50.1312 GTEX-S33H-0626-SM-2XUAP 1 C1 2 pieces 7x6 & 7x5 mm; moderate venous congestion; moderate alveolar fluid; no pneumonia 7.8 Lung Lung 0008952 220 966 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-0726-SM-4AD6M 1 C1 6 pieces up to 9x2 mm; focal plaque and small dissection 6.9 Blood Vessel Artery - Aorta 0001496 222 965 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989526 204515 0.969565 0.991319 0.761597 22589 1 76 0.00215941 112 0 5.45706e+07 0.0301063 120496 5.50485e+07 3.43221e+06 22609 2.71539e+07 0 0.207968 0.991319 0.754985 5.45706e+07 0.002836 1.18512e+07 4.99632e+06 1.187e+07 123 1.1898e+07 9.00676e+06 0.0024971 1.19188e+07 50.0437 0.00218891 0.993112 0 50.0397 GTEX-S33H-0826-SM-4AD5Y 0 C1 6 pieces up to 6x2.5 mm; 3 have up to 1 x2 mm muscularis propria at edge 8.4 Esophagus Esophagus - Mucosa 0006920 230 958 BP-22611 RNA isolation_PAXgene Tissue miRNA 02/23/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990677 279986 0.969801 0.992285 0.778015 22422 1 76 0.00206353 138 0 6.67503e+07 0.0300076 447998 6.72692e+07 4.27418e+06 22440 3.32518e+07 0 0.191786 0.992285 0.772013 6.67503e+07 0.00279247 1.49449e+07 8.20113e+06 1.49932e+07 154 1.50132e+07 1.09411e+07 0.00242741 1.50313e+07 50.03 0.00665977 0.993893 0 50.0806 GTEX-S33H-1026-SM-EZ6L6 0 C1 6 pieces up to 6x3 mm; minimal subcutaneous adipose 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 234 955 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986635 285476 0.972639 0.988151 0.83314 24414 1 76 0.00242338 291 0 1.00932e+08 0.0271544 810789 1.02142e+08 7.69346e+06 24441 5.03052e+07 0 0.139499 0.988151 0.823268 1.00932e+08 0.00345113 2.20963e+07 1.12938e+07 2.21528e+07 313 2.21336e+07 1.82475e+07 0.00293647 2.22543e+07 50.1359 0.00793788 0.989667 0 50.0639 GTEX-S33H-1126-SM-2XCB6 0 C1 2 pieces 7x5 & 7x6 mm: well fixed; 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 236 954 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.964788 231584 0.9712 0.968208 0.80213 24728 1 76 0.00233386 281 0 1.22465e+08 0.0284929 898321 1.26486e+08 1.02076e+07 24772 6.08064e+07 0 0.169069 0.968208 0.776629 1.22465e+08 0.0107312 2.6793e+07 1.24487e+07 2.69694e+07 286 2.70553e+07 1.91465e+07 0.00651768 2.71037e+07 50.0448 0.00710212 0.971628 0 50.1641 GTEX-S33H-1226-SM-4AD69 1 C1 2 pieces 10x7 & 9x7 mm; ~10-20% adipose within aliquot 6.4 Pancreas Pancreas 0001150 239 951 BP-22720 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990052 255461 0.972259 0.991695 0.799862 21432 1 76 0.0021958 100 0 6.00253e+07 0.0275287 276330 6.0528e+07 3.80564e+06 21450 2.98993e+07 0 0.172397 0.991695 0.793219 6.00253e+07 0.00292636 1.36403e+07 1.56202e+07 1.37248e+07 111 1.37149e+07 1.50823e+07 0.00256047 1.37533e+07 50.0699 0.00456533 0.993338 0 50.1543 GTEX-S33H-1326-SM-4AD6A 1 C1 2 pieces 11x6 & 9x9 mm;~ 20-30% peripheral adipose; largely cortex 6.3 Adrenal Gland Adrenal Gland 0002369 241 951 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.987106 303721 0.967422 0.989595 0.806045 22564 1 76 0.00207446 148 0 6.37201e+07 0.0323762 2.78201e+06 6.43901e+07 4.26637e+06 22589 3.17093e+07 0 0.161377 0.989595 0.797658 6.37201e+07 0.00293048 1.39082e+07 9.61179e+06 1.40002e+07 174 1.40032e+07 7.67299e+06 0.00250139 1.40542e+07 50.0909 0.0432055 0.992084 0 50.1648 GTEX-S33H-1426-SM-EZ6L7 1 C1 6 pieces up to 8x3 mm; all cortex; good glomeruli 5.8 Kidney Kidney - Cortex 0001225 244 948 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991276 1.12643e+06 0.948846 0.992778 0.785268 24202 1 76 0.002253 270 0 1.20737e+08 0.0510171 6.8741e+06 1.21616e+08 7.92181e+06 24236 6.01914e+07 0 0.163578 0.992778 0.779596 1.20737e+08 0.00309347 2.58194e+07 6.63938e+07 2.62336e+07 325 2.63311e+07 9.66028e+06 0.0026726 2.58912e+07 49.5788 0.0565231 0.99428 0 50.3978 GTEX-S33H-1626-SM-4AD68 1 C1 2 pieces 8x5 & 7x7 mm; not congested 6.6 Liver Liver 0001114 248 946 BP-22722 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991309 282321 0.970701 0.992957 0.817748 21312 1 76 0.00206249 141 0 6.63354e+07 0.0283959 1.17754e+06 6.6806e+07 4.27957e+06 21336 3.30174e+07 0 0.152953 0.992957 0.811988 6.63354e+07 0.00276973 1.44781e+07 8.74197e+06 1.45256e+07 172 1.45168e+07 9.65634e+06 0.00241552 1.45886e+07 50.1233 0.0176263 0.994605 0 50.082 GTEX-S33H-1826-SM-4AD65 1 C1 2 pieces 8x7 & 8x5 mm; fibromuscular content, no glands 6.1 Prostate Prostate 0002367 253 941 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989451 317498 0.96265 0.991423 0.761266 25765 1 76 0.00204774 275 0 9.35342e+07 0.0371623 912306 9.43434e+07 6.42032e+06 25809 4.65654e+07 0 0.201383 0.991423 0.754737 9.35342e+07 0.00272237 2.04883e+07 1.07884e+07 2.05947e+07 299 2.06258e+07 1.19606e+07 0.00238438 2.06364e+07 50.0127 0.00967006 0.993394 0 50.1295 GTEX-S33H-1926-SM-EYYVH 3 C1 6 pieces up to 9x5.8 mm; mucosa largely sloughed, shows cassette grid compression artifact; muscle only slightly autolyzed 5.9 Bladder Bladder 0001255 255 940 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988829 200290 0.971813 0.991347 0.784947 24044 1 76 0.00214227 162 0 7.29009e+07 0.0279402 588584 7.35372e+07 2.67171e+06 24072 3.6275e+07 0 0.186867 0.991347 0.778154 7.29009e+07 0.00318976 1.61145e+07 7.15914e+06 1.6237e+07 184 1.6245e+07 1.10058e+07 0.00266468 1.62804e+07 50.0544 0.00800389 0.993864 0 50.1893 GTEX-S33H-2226-SM-2XCB7 1 C1 2 pieces 6x6 & 7x7 mm;<5% internal adipose 7.8 Muscle Muscle - Skeletal 0011907 261 936 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.326218 27790 0.97851 0.328624 0.860458 16769 1 76 0.00236648 107 0 1.93484e+07 0.0198602 233554 5.88769e+07 7.58036e+06 16771 9.43051e+06 0 0.118051 0.328624 0.282767 1.93484e+07 0.0135266 3.9993e+06 2.35004e+06 4.28244e+06 119 4.3377e+06 3.48043e+06 0.00790569 4.09805e+06 48.5795 0.00396682 0.33103 0 51.7094 GTEX-S33H-2226-SM-2XU99 1 C1 2 pieces 6x6 & 7x7 mm;<5% internal adipose 7.8 Muscle Muscle - Skeletal 0011907 261 936 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-2226-SM-5S2UF 1 C1 2 pieces 6x6 & 7x7 mm;<5% internal adipose 7.8 Muscle Muscle - Skeletal 0011907 261 936 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.993719 202465 0.983075 0.995295 0.8769 19920 1 76 0.00164079 267 0 8.68501e+07 0.0166785 1.0833e+06 8.72606e+07 8.72445e+06 19926 4.32879e+07 0 0.106175 0.995295 0.872774 8.68501e+07 0.00259793 1.87222e+07 1.32711e+07 1.86165e+07 266 1.85779e+07 1.65026e+07 0.0021186 1.88859e+07 50.4111 0.0124146 0.996872 0 49.8585 GTEX-S33H-2226-SM-DKPOP 1 C1 2 pieces 6x6 & 7x7 mm;<5% internal adipose 7.8 Muscle Muscle - Skeletal 0011907 261 936 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992838 420706 0.983457 0.99493 0.883623 20853 1 76 0.00244606 270 0 1.17371e+08 0.0162959 1.52494e+06 1.17969e+08 1.21038e+07 20867 5.84674e+07 0 0.0998332 0.99493 0.879144 1.17371e+08 0.00247914 2.49956e+07 1.46202e+07 2.56281e+07 324 2.56881e+07 2.33103e+07 0.00246257 2.51535e+07 49.4742 0.0129266 0.997022 0 50.6248 GTEX-S33H-2326-SM-2XCB3 0 C1 2 pieces 5x3 & 5x4 mm; ~30% adipose circular envelope between 0.5 and 1.0 mm thick (could be trimmed) 6.6 Nerve Nerve - Tibial 0001323 263 934 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.927404 152988 0.965403 0.931972 0.752148 25033 1 76 0.00245805 158 0 8.7843e+07 0.0343091 352670 9.4255e+07 8.108e+06 25069 4.35241e+07 0 0.213255 0.931972 0.700981 8.7843e+07 0.011529 1.91625e+07 7.8223e+06 1.93585e+07 177 1.94812e+07 1.30841e+07 0.00697129 1.94419e+07 49.9496 0.00374166 0.93654 0 50.2544 GTEX-S33H-2326-SM-2XU8P 0 C1 2 pieces 5x3 & 5x4 mm; ~30% adipose circular envelope between 0.5 and 1.0 mm thick (could be trimmed) 6.6 Nerve Nerve - Tibial 0001323 263 934 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S33H-2426-SM-2XCB2 0 C1 2 pieces, 2 mm artery; one clean, other ~40% fibroadipose peripherally 7.7 Blood Vessel Artery - Tibial 0007610 264 934 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.856354 152950 0.97085 0.859313 0.805029 22819 1 76 0.0023975 148 0 8.8844e+07 0.0285635 393148 1.03389e+08 8.48364e+06 22850 4.40303e+07 0 0.165821 0.859313 0.691772 8.8844e+07 0.0112798 1.89647e+07 6.30804e+06 1.92019e+07 184 1.92516e+07 1.54276e+07 0.00682334 1.92033e+07 49.9372 0.00380259 0.862272 0 50.3107 GTEX-S33H-2426-SM-2XU8L 0 C1 2 pieces, 2 mm artery; one clean, other ~40% fibroadipose peripherally 7.7 Blood Vessel Artery - Tibial 0007610 264 934 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-0001-SM-2VCTY B1 Blood Whole Blood 0013756 -148 BP-21856 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/27/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428020_R04C01 GTEX-S341-0001-SM-2XK2K B1 Blood Whole Blood 0013756 -148 BP-21856 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/27/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R02C01 GTEX-S341-0001-SM-3USS9 B1 Blood Whole Blood 0013756 -148 BP-21856 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/27/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-S341-0001-SM-5JK33 B1 Blood Whole Blood 0013756 -148 BP-21856 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/27/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S341-0006-SM-2XUA1 B1 7.3 Blood Whole Blood 0013756 -148 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-0006-SM-3NM8D B1 7.3 Blood Whole Blood 0013756 -148 BP-21854 RNA isolation_PAXgene Blood RNA (Manual) 01/27/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.975411 881860 0.961221 0.978433 0.795585 18304 1 76 0.0046967 119 0 9.26511e+07 0.0373656 191959 9.46934e+07 1.86585e+07 18313 4.59958e+07 0 0.165636 0.978433 0.778426 9.26511e+07 0.00658681 2.08479e+07 1.09037e+08 2.10727e+07 140 2.11111e+07 2.21478e+07 0.00563884 2.11007e+07 49.9877 0.00202716 0.981454 0 50.2681 GTEX-S341-0008-SM-4AD6D B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 225 BP-33214 RNA isolation_Trizol Manual (Cell Pellet) 11/16/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992817 429738 0.979163 0.994659 0.866776 20621 1 76 0.00196571 179 0 7.754e+07 0.0204105 178487 7.79564e+07 5.19806e+06 20638 3.8624e+07 0 0.112387 0.994659 0.862146 7.754e+07 0.00254194 1.73813e+07 8.46369e+06 1.74177e+07 177 1.74862e+07 1.86972e+07 0.00225329 1.74526e+07 49.9519 0.00228957 0.996501 0 50.0523 GTEX-S341-0126-SM-4AD64 1 B1 2 aliquots, ~ 10x7 & 2x1mm, the smaller attached to a large nubbin of fat, ~8x5mm--LDACC ALERT 8 Adrenal Gland Adrenal Gland 0002369 145 1053 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992342 372444 0.976295 0.994195 0.828136 24056 1 76 0.00245742 271 0 8.95425e+07 0.0233567 1.50008e+06 9.00653e+07 5.54609e+06 24087 4.45945e+07 0 0.148159 0.994195 0.823328 8.95425e+07 0.0031665 1.97874e+07 9.81711e+06 1.99142e+07 263 1.98778e+07 1.41075e+07 0.0028113 1.99698e+07 50.1154 0.0166554 0.996048 0 50.1597 GTEX-S341-0226-SM-2XCAX 1 B1 2 aliquots, ~ 9xx8mm. Microglandular adenomatoid nodule in squares; focal skeletal muscle encircled. LDACC ALERT 7 Thyroid Thyroid 0002046 154 1044 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 EXCLUDE 0.291098 44279 0.962007 0.294674 0.726985 20148 1 76 0.00310971 114 0 2.11557e+07 0.0363138 72405 7.17938e+07 8.60829e+06 20160 1.02897e+07 0 0.235021 0.294674 0.214224 2.11557e+07 0.013898 4.45794e+06 3.27193e+06 4.68097e+06 119 4.79985e+06 3.2143e+06 0.00843837 4.6086e+06 48.9836 0.00100851 0.29825 0 51.2202 GTEX-S341-0226-SM-2XU9O 1 B1 2 aliquots, ~ 9xx8mm. Microglandular adenomatoid nodule in squares; focal skeletal muscle encircled. LDACC ALERT 7 Thyroid Thyroid 0002046 154 1044 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-0226-SM-5S2VG 1 B1 2 aliquots, ~ 9xx8mm. Microglandular adenomatoid nodule in squares; focal skeletal muscle encircled. LDACC ALERT 7 Thyroid Thyroid 0002046 154 1044 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.992201 340171 0.962565 0.993837 0.733803 23811 1 76 0.00229845 159 0 8.02011e+07 0.0370945 211788 8.06985e+07 7.79915e+06 23852 3.99434e+07 0 0.228763 0.993837 0.72928 8.02011e+07 0.00320828 1.74566e+07 1.15184e+07 1.76077e+07 169 1.75674e+07 1.24872e+07 0.00275262 1.76187e+07 50.0728 0.00262443 0.995472 0 50.2154 GTEX-S341-0226-SM-D4P1Y 1 B1 2 aliquots, ~ 9xx8mm. Microglandular adenomatoid nodule in squares; focal skeletal muscle encircled. LDACC ALERT 7 Thyroid Thyroid 0002046 154 1044 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993296 420602 0.966095 0.994716 0.737859 24794 1 76 0.00269781 208 0 1.05091e+08 0.033568 270375 1.05649e+08 1.24402e+07 24843 5.23595e+07 0 0.228236 0.994716 0.733961 1.05091e+08 0.00399387 2.29472e+07 1.07867e+07 2.31259e+07 242 2.31328e+07 1.66799e+07 0.00334491 2.30779e+07 49.9406 0.00255917 0.996137 0 50.1939 GTEX-S341-0326-SM-2XCAU 1 B1 2 aliquots, ~ 9x6mm. Mild congestion; prominent mucoid secretions in bronchus 6.4 Lung Lung 0008952 170 1029 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.96643 165290 0.967511 0.971059 0.800131 25212 1 76 0.00296808 161 0 8.8555e+07 0.0319731 557367 9.11943e+07 7.84063e+06 25248 4.38915e+07 0 0.16738 0.971059 0.776974 8.8555e+07 0.0121324 1.92867e+07 9.28054e+06 1.95684e+07 189 1.95579e+07 1.30949e+07 0.00752842 1.96886e+07 50.1665 0.00611186 0.975687 0 50.3626 GTEX-S341-0326-SM-2XUAR 1 B1 2 aliquots, ~ 9x6mm. Mild congestion; prominent mucoid secretions in bronchus 6.4 Lung Lung 0008952 170 1029 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-0426-SM-4AD5L 1 B1 6 pieces, ~ 7x4mm 7.9 Esophagus Esophagus - Muscularis 0004648 170 1029 BP-22727 RNA isolation_PAXgene Tissue miRNA 02/28/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991567 223919 0.973838 0.993219 0.821844 21461 1 76 0.00224116 127 0 5.78307e+07 0.0258358 373217 5.82256e+07 3.55032e+06 21475 2.88063e+07 0 0.151994 0.993219 0.816271 5.78307e+07 0.00291498 1.24291e+07 4.64216e+06 1.25177e+07 137 1.24897e+07 9.7439e+06 0.00257751 1.25454e+07 50.1112 0.00640985 0.99487 0 50.1776 GTEX-S341-0526-SM-4AD5U 1 B1 6 pieces, ~6x2mm. Squamous mucosa is ~20% of thickness 9.6 Esophagus Esophagus - Mucosa 0006920 174 1026 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991098 292456 0.975202 0.992575 0.826224 22164 1 76 0.00236978 157 0 7.39103e+07 0.0243553 370482 7.44632e+07 4.64320e+06 22182 3.68266e+07 0 0.148978 0.992575 0.820089 7.39103e+07 0.00299998 1.66501e+07 1.1555e+07 1.67186e+07 168 1.67308e+07 1.43056e+07 0.00268441 1.67402e+07 50.0141 0.00497537 0.994052 0 50.1027 GTEX-S341-0626-SM-4AD5T 0 B1 6 pieces, ~ 10x4mm. Mucosa extremely well preserved, ~30% of thickness 6.9 Stomach Stomach 0000945 177 1024 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.988388 219314 0.975251 0.990162 0.823998 23119 1 76 0.00252769 279 0 8.18121e+07 0.0238627 634977 8.2625e+07 5.56165e+06 23146 4.07236e+07 0 0.151253 0.990162 0.815891 8.18121e+07 0.0031775 1.84847e+07 4.88617e+07 1.8665e+07 226 1.86493e+07 1.65664e+07 0.00285202 1.8634e+07 49.9794 0.00768505 0.991936 0 50.2426 GTEX-S341-0726-SM-4AD5R 0 B1 2 aliquots, ~ 9x7mm. Rare residual oocytes, involuting corpus luteum 7.3 Ovary Ovary 0000992 182 1020 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991766 324393 0.965536 0.993461 0.782729 22977 1 76 0.00216105 168 0 7.74614e+07 0.0342215 139674 7.79713e+07 4.85135e+06 23016 3.85828e+07 0 0.182807 0.993461 0.77761 7.74614e+07 0.00288132 1.69511e+07 8.32319e+06 1.70063e+07 175 1.70098e+07 1.37202e+07 0.00252057 1.70761e+07 50.0973 0.00179135 0.995155 0 50.0812 GTEX-S341-0826-SM-4AD73 0 B1 2 aliquots, ~ 4.5mm d. Mucosa extremely well preserved 7.6 Fallopian Tube Fallopian Tube 0003889 185 1017 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992187 289091 0.969447 0.993743 0.804227 23820 1 76 0.0021893 161 0 7.11444e+07 0.0302125 255315 7.15923e+07 4.44211e+06 23842 3.54388e+07 0 0.16522 0.993743 0.799195 7.11444e+07 0.00289148 1.54854e+07 6.35048e+06 1.55364e+07 176 1.55318e+07 1.11856e+07 0.00253984 1.55964e+07 50.1036 0.00356623 0.995299 0 50.0821 GTEX-S341-1026-SM-4AD71 1 B1 2 aliquots, ~ 9x7mm. All myometrium, no visible endometrial glands or stroma 7.1 Uterus Uterus 0000995 190 1014 BP-22768 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990847 343139 0.969533 0.992665 0.817418 21902 1 76 0.00214571 133 0 6.40913e+07 0.0301514 139910 6.45649e+07 4.12478e+06 21918 3.19071e+07 0 0.152115 0.992665 0.811422 6.40913e+07 0.00293605 1.37612e+07 5.84945e+06 1.38223e+07 146 1.37888e+07 1.17712e+07 0.00254016 1.39088e+07 50.2166 0.00216697 0.994484 0 50.1108 GTEX-S341-1126-SM-4AD6T 1 B1 4 aliquots, ~ 12x9mm. 3 show focal squamous mucosa, ~100 microns thick, encircled; one with single layer endocervical mucosa, 10 microns thick, en squared 7.4 Cervix Uteri Cervix - Ectocervix 0012249 193 1011 BP-22768 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992169 403947 0.969159 0.993781 0.806761 23913 1 76 0.00218662 174 0 8.33596e+07 0.0304152 148797 8.38813e+07 5.11709e+06 23940 4.15039e+07 0 0.162398 0.993781 0.801744 8.33596e+07 0.00282215 1.81884e+07 7.41061e+06 1.82592e+07 200 1.82668e+07 1.51236e+07 0.00250387 1.83136e+07 50.064 0.0017739 0.995393 0 50.0971 GTEX-S341-1226-SM-4AD5S 1 B1 6 pieces, ~ 5x4mm, squamous mucosa is ~ 2-3% of thickness, present at least focally in 5 of 6 aliquots 8.9 Vagina Vagina 0000996 196 1009 BP-22768 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991326 377474 0.973421 0.993017 0.778615 22948 1 76 0.0023242 174 0 8.8517e+07 0.0262099 283179 8.91394e+07 5.69952e+06 22971 4.40897e+07 0 0.194805 0.993017 0.773178 8.8517e+07 0.00295227 1.97956e+07 1.32667e+07 1.98419e+07 198 1.98857e+07 1.60728e+07 0.0026377 1.98928e+07 50.0089 0.00317681 0.994709 0 50.0584 GTEX-S341-1326-SM-4AD72 1 B1 4 aliquots, ~ 7x7mm. One shows endocervical surface mucosa with early squamous metaplasia encircled, and deeper endocervical glands en squared; other 3 with no glands, only stroma 7.5 Cervix Uteri Cervix - Endocervix 0000458 197 1009 BP-22768 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990603 254444 0.961564 0.992552 0.759076 24126 1 76 0.00229677 125 0 5.64126e+07 0.0380112 126280 5.68359e+07 3.5837e+06 24151 2.80779e+07 0 0.202488 0.992552 0.753422 5.64126e+07 0.00304976 1.23203e+07 5.36105e+06 1.23769e+07 124 1.2401e+07 9.57283e+06 0.00267253 1.24012e+07 50.0004 0.00222183 0.9945 0 50.1146 GTEX-S341-1426-SM-4AD6U 1 B1 6 pieces, ~7x3.5mm. Mucosa reasonably well preserved, ~8-10% of thickness 7.6 Colon Colon - Transverse 0001157 205 1002 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992581 303830 0.971121 0.994111 0.812295 23369 1 76 0.00223563 169 0 7.83955e+07 0.028596 456913 7.88599e+07 4.97264e+06 23388 3.90577e+07 0 0.158826 0.994111 0.807511 7.83955e+07 0.00287428 1.70772e+07 7.51587e+06 1.7133e+07 191 1.71142e+07 1.32485e+07 0.00255446 1.72099e+07 50.1394 0.00579398 0.995641 0 50.0815 GTEX-S341-1526-SM-4AD6K 1 B1 2 aliquots, ~8x5mm. Focal areas of fibrocystic (microcystic) change encircled; normal TDLUs en squared 7.2 Breast Breast - Mammary Tissue 0008367 210 997 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990856 273814 0.965896 0.992495 0.75429 24462 1 76 0.00237695 138 0 6.876e+07 0.033462 120902 6.928e+07 4.14810e+06 24495 3.42297e+07 0 0.211606 0.992495 0.748629 6.876e+07 0.00294571 1.50688e+07 6.61789e+06 1.51037e+07 148 1.51276e+07 1.12226e+07 0.00266086 1.51547e+07 50.0447 0.00174512 0.994134 0 50.0579 GTEX-S341-1626-SM-3K2B8 0 B1 2 aliquots, ~9x8mm 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 221 987 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.577702 133281 0.969423 0.580767 0.822373 20537 1 76 0.0143033 112 0 3.45011e+07 0.0302879 183540 5.94061e+07 2.11732e+07 20543 1.69719e+07 0 0.14705 0.580767 0.477607 3.45011e+07 0.0162514 7.44654e+06 5.55861e+06 7.58553e+06 116 7.62712e+06 5.37979e+06 0.0152722 7.57402e+06 49.8254 0.00308958 0.583833 0 50.4623 GTEX-S341-1726-SM-2XU8C 0 B1 6 pieces, ~ 7.5x2.5mm. Squamous epithelium is 2-3% of thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 224 985 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-1726-SM-3K2AK 0 B1 6 pieces, ~ 7.5x2.5mm. Squamous epithelium is 2-3% of thickness 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 224 985 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.636428 100190 0.967168 0.64399 0.821908 20030 1 76 0.0138891 175 0 3.1641e+07 0.0325361 125992 4.91328e+07 1.81429e+07 20039 1.55414e+07 0 0.14526 0.64399 0.5293 3.1641e+07 0.0172007 6.63699e+06 6.12685e+06 6.74377e+06 122 6.87682e+06 5.18094e+06 0.0155255 6.84648e+06 49.8895 0.00256432 0.651551 0 50.399 GTEX-S341-1826-SM-2XU9V 0 B1 2 aliquots, ~ 8x5mm. 2.5x1mm focus of fibrous tissue in one, encircled. Minimal interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 225 984 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-1826-SM-3K2AB 0 B1 2 aliquots, ~ 8x5mm. 2.5x1mm focus of fibrous tissue in one, encircled. Minimal interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 225 984 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.958651 185655 0.976502 0.964111 0.864884 19401 1 76 0.0141736 119 0 5.25753e+07 0.02327 704527 5.45324e+07 1.84687e+07 19407 2.606e+07 0 0.111618 0.964111 0.833844 5.25753e+07 0.0156348 1.14374e+07 8.09607e+06 1.16482e+07 117 1.16987e+07 1.00077e+07 0.0149001 1.16511e+07 49.8981 0.0129194 0.96957 0 50.4565 GTEX-S341-1926-SM-2XU91 0 B1 2 aliquots, ~ 4.5mm d. Good clean specimens 6.9 Nerve Nerve - Tibial 0001323 242 968 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S341-1926-SM-3K2BA 0 B1 2 aliquots, ~ 4.5mm d. Good clean specimens 6.9 Nerve Nerve - Tibial 0001323 242 968 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.970014 239366 0.960043 0.976333 0.766053 23829 1 76 0.0142694 129 0 6.79237e+07 0.0397198 327480 6.95702e+07 2.37157e+07 23863 3.36191e+07 0 0.19399 0.976333 0.747923 6.79237e+07 0.0158306 1.46828e+07 1.03912e+07 1.48209e+07 126 1.49368e+07 9.33213e+06 0.015045 1.49745e+07 50.063 0.00470719 0.982652 0 50.234 GTEX-S341-2026-SM-2XCAA 0 B1 2 aliquots, ~2mm d. Good clean specimens 7.1 Blood Vessel Artery - Tibial 0007610 244 967 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-1559 09/11/2012 TruSeq.v1 RNASEQ 0.704349 38511 0.973659 0.709229 0.838808 19400 1 76 0.00258784 126 0 2.86406e+07 0.0257726 83625 4.03827e+07 3.8975e+06 19404 1.4148e+07 0 0.134851 0.709229 0.594907 2.86406e+07 0.0119671 6.1122e+06 2.55406e+06 6.23198e+06 130 6.28927e+06 5.41002e+06 0.0072452 6.24713e+06 49.8319 0.00207081 0.714109 0 50.4851 GTEX-S341-2026-SM-2XU8A 0 B1 2 aliquots, ~2mm d. Good clean specimens 7.1 Blood Vessel Artery - Tibial 0007610 244 967 BP-22843 RNA isolation_PAXgene Tissue miRNA 03/02/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3LF-0001-SM-DINCJ C1 Blood Whole Blood 0013756 561 BP-21919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/30/2012 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-S3LF-0001-SM-DLIOS C1 Blood Whole Blood 0013756 561 BP-21919 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/30/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-S3LF-0226-SM-EZ6LJ 1 C1 2 aliquots, ~8x6mm 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 669 1430 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.985559 188779 0.97382 0.987104 0.798995 23071 1 76 0.0025791 279 0 9.11532e+07 0.0258926 1.20122e+06 9.2344e+07 7.14437e+06 23094 4.54111e+07 0 0.174825 0.987104 0.788692 9.11532e+07 0.00392289 2.01812e+07 1.46237e+07 2.02239e+07 261 2.02307e+07 1.55376e+07 0.00324994 2.03109e+07 50.0989 0.0130081 0.98865 0 50.0529 GTEX-S3LF-0526-SM-EZ6LK 2 C1 2 alqiuots, ~7x7mm. Minimal interstital fat, unusally poorly preserved 5.7 Muscle Muscle - Skeletal 0011907 688 1414 BP-22766 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.988079 218925 0.984085 0.98971 0.881325 19939 1 76 0.00227689 372 0 9.42395e+07 0.0157906 1.75848e+07 9.52193e+07 7.06692e+06 19951 4.69739e+07 0 0.10276 0.98971 0.872256 9.42395e+07 0.00350807 2.13101e+07 1.60455e+07 2.18068e+07 347 2.16712e+07 1.14986e+07 0.00289147 2.15723e+07 49.8856 0.184677 0.991341 0 50.5761 GTEX-S3LF-1126-SM-EVR33 3 C1 2 aliquots, ~7x6mm. Badly autolyzed, severe congestion 5.5 Lung Lung 0008952 717 1389 BP-22768 RNA isolation_PAXgene Tissue miRNA 02/29/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.983687 182146 0.969908 0.985707 0.80274 23839 1 76 0.00216604 222 0 8.89711e+07 0.0297905 769340 9.02612e+07 6.50964e+06 23862 4.42722e+07 0 0.167167 0.985707 0.791267 8.89711e+07 0.00369332 1.97495e+07 2.12158e+07 1.99436e+07 227 1.98968e+07 1.60607e+07 0.00292812 1.99697e+07 50.0914 0.00852349 0.987728 0 50.2445 GTEX-S3XE-0003-SM-2VCTV B1 Blood Whole Blood 0013756 -153 BP-21967 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/31/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428021_R03C01 GTEX-S3XE-0003-SM-2XK2I B1 Blood Whole Blood 0013756 -153 BP-21967 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/31/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R04C02 GTEX-S3XE-0003-SM-3UZFM B1 Blood Whole Blood 0013756 -153 BP-21967 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/31/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-S3XE-0003-SM-6WBUO B1 Blood Whole Blood 0013756 -153 BP-21967 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 01/31/2012 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-S3XE-0006-SM-2XU9B B1 8.7 Blood Whole Blood 0013756 -153 BP-22035 RNA isolation_PAXgene Blood RNA (Manual) 02/01/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-0006-SM-3K2AA B1 8.7 Blood Whole Blood 0013756 -153 BP-22035 RNA isolation_PAXgene Blood RNA (Manual) 02/01/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.932987 520923 0.957137 0.939291 0.789793 18124 1 76 0.0144092 105 0 5.0633e+07 0.0419668 130963 5.39055e+07 1.9485e+07 18128 2.5054e+07 0 0.167344 0.939291 0.741846 5.0633e+07 0.0164074 1.10985e+07 5.25547e+07 1.12533e+07 123 1.13613e+07 1.04495e+07 0.0154016 1.13258e+07 49.9217 0.00242949 0.945596 0 50.3462 GTEX-S3XE-0008-SM-3NM8O B1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 207 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.992149 593260 0.972183 0.994126 0.841316 22512 1 76 0.00363633 295 0 1.12484e+08 0.0274843 347215 1.13149e+08 1.99488e+07 22539 5.59945e+07 0 0.130867 0.994126 0.836374 1.12484e+08 0.00469659 2.5088e+07 1.55121e+07 2.50657e+07 317 2.51687e+07 2.35974e+07 0.0041654 2.5199e+07 50.03 0.00306866 0.996103 0 49.9778 GTEX-S3XE-0126-SM-4AD4R 1 B1 2 pieces 18x5 & 12x9 mm; cortex; ~20% adipose 8.9 Adrenal Gland Adrenal Gland 0002369 78 504 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.993404 303295 0.977343 0.995012 0.851353 23007 1 76 0.00194452 273 0 9.56489e+07 0.0223385 1.52859e+06 9.61284e+07 5.84608e+06 23027 4.76628e+07 0 0.12599 0.995012 0.847106 9.56489e+07 0.00256359 2.12257e+07 9.52149e+06 2.13403e+07 309 2.13169e+07 1.72316e+07 0.00225355 2.13879e+07 50.0831 0.0159015 0.99662 0 50.1346 GTEX-S3XE-0226-SM-4AD6I 1 B1 2 pieces 5x4 & 3x2 mm; larger with focally calcified plaque & 50% occlusion & 10% adipose 8.1 Blood Vessel Artery - Coronary 0001621 83 499 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992672 201943 0.973453 0.99421 0.831007 21471 1 76 0.00185767 126 0 5.90847e+07 0.0262065 310339 5.94288e+07 3.62684e+06 21487 2.9439e+07 0 0.142446 0.99421 0.826196 5.90847e+07 0.00246631 1.27679e+07 4.89972e+06 1.28091e+07 140 1.27991e+07 1.11187e+07 0.00216152 1.28672e+07 50.1326 0.00522203 0.995748 0 50.0804 GTEX-S3XE-0326-SM-4AD6L 1 B1 6 pieces up to 10x2 mm; mild linear medial calcification; minimal adipose 7 Blood Vessel Artery - Aorta 0001496 86 496 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.99048 209752 0.976417 0.992404 0.849488 21423 1 76 0.00185694 159 0 7.15386e+07 0.0232666 274581 7.20861e+07 4.83086e+06 21433 3.56249e+07 0 0.126929 0.992404 0.843036 7.15386e+07 0.00269522 1.56799e+07 5.13958e+06 1.57058e+07 180 1.57009e+07 1.32158e+07 0.00227527 1.58189e+07 50.1871 0.00380907 0.994329 0 50.0413 GTEX-S3XE-0426-SM-2XUAK 1 B1 2 pieces 10x9 & 8x8 mm; minimal adipose 8.8 Heart Heart - Left Ventricle 0006566 90 492 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-0426-SM-3K2AC 1 B1 2 pieces 10x9 & 8x8 mm; minimal adipose 8.8 Heart Heart - Left Ventricle 0006566 90 492 BP-22845 RNA isolation_PAXgene Tissue miRNA 03/02/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.981869 208065 0.983797 0.986308 0.870426 19340 1 76 0.0138267 114 0 7.13386e+07 0.0160047 2.1474e+06 7.23289e+07 2.2348e+07 19346 3.54284e+07 0 0.113371 0.986308 0.858509 7.13386e+07 0.0147935 1.55829e+07 1.62662e+07 1.58473e+07 141 1.57526e+07 1.00455e+07 0.0143079 1.58567e+07 50.1647 0.0296893 0.990747 0 50.4205 GTEX-S3XE-0526-SM-4AD4G 0 B1 2 pieces ~9mm square; scattered adipose cells throughout, <10% 7.1 Pancreas Pancreas 0001150 96 486 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.988625 331882 0.978978 0.990527 0.857019 21677 1 76 0.00203931 126 0 9.43958e+07 0.0207114 430035 9.52986e+07 6.52467e+06 21698 4.70068e+07 0 0.121958 0.990527 0.848901 9.43958e+07 0.00284965 2.16415e+07 2.71398e+07 2.19287e+07 150 2.18639e+07 2.82721e+07 0.0024437 2.18926e+07 50.0328 0.0045125 0.992429 0 50.3296 GTEX-S3XE-0626-SM-4AD6B 1 B1 2 pieces 11x7 & 8x8; no congestion 6.2 Spleen Spleen 0002106 100 482 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.987296 259788 0.967429 0.989307 0.804098 23710 1 76 0.0023705 164 0 7.74236e+07 0.0315292 416883 7.82605e+07 5.14608e+06 23732 3.85141e+07 0 0.163331 0.989307 0.7955 7.74236e+07 0.00306415 1.70874e+07 9.5014e+06 1.71654e+07 194 1.71778e+07 1.20301e+07 0.00271662 1.72263e+07 50.0704 0.00532687 0.991318 0 50.1139 GTEX-S3XE-0826-SM-4AD4U 1 B1 6 pieces up to 10x4.4 mm; 8.6 Esophagus Esophagus - Muscularis 0004648 129 453 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990947 296112 0.976314 0.992808 0.842904 22416 1 76 0.00187755 165 0 7.19962e+07 0.0233947 500383 7.25177e+07 4.603e+06 22431 3.58575e+07 0 0.13341 0.992808 0.836842 7.19962e+07 0.00267061 1.58142e+07 6.48751e+06 1.58639e+07 176 1.58678e+07 1.37085e+07 0.00227334 1.59386e+07 50.1114 0.00690015 0.99467 0 50.0784 GTEX-S3XE-0926-SM-4AD4S 1 B1 6 pieces up to 8x3.2 mm; 9.2 Esophagus Esophagus - Mucosa 0006920 134 448 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.988783 225611 0.97827 0.990456 0.839744 22565 1 76 0.00206082 159 0 7.18968e+07 0.0213986 479141 7.25896e+07 4.85414e+06 22578 3.58238e+07 0 0.138526 0.990456 0.83173 7.18968e+07 0.00270152 1.61416e+07 1.08927e+07 1.62376e+07 165 1.62588e+07 1.47398e+07 0.00238063 1.62356e+07 49.9643 0.00660069 0.99213 0 50.1482 GTEX-S3XE-1026-SM-4AD4O 1 B1 7 pieces up to 9x3 mm; chronic gastritis; oxyntic mucosa 7.4 Stomach Stomach 0000945 141 441 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.983985 256330 0.976318 0.986111 0.839142 22265 1 76 0.00274361 215 0 6.6509e+07 0.0219108 791320 6.74458e+07 4.34333e+06 22286 3.30171e+07 0 0.137176 0.986111 0.827487 6.6509e+07 0.00354558 1.51646e+07 4.07346e+07 1.52673e+07 173 1.5317e+07 1.45247e+07 0.00314373 1.52522e+07 49.894 0.0117327 0.988236 0 50.1687 GTEX-S3XE-1126-SM-4AD4N 1 B1 6 pieces up to 11x4 mm; each has well preserved mucosa and all layers intact 8.4 Colon Colon - Transverse 0001157 152 430 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991284 277136 0.974546 0.993148 0.829752 23059 1 76 0.00204296 150 0 6.83981e+07 0.0248722 594476 6.887e+07 4.16676e+06 23082 3.40553e+07 0 0.144794 0.993148 0.824067 6.83981e+07 0.00277494 1.49301e+07 6.20882e+06 1.50511e+07 161 1.5051e+07 1.22996e+07 0.00240826 1.50508e+07 49.9996 0.00863185 0.995012 0 50.2019 GTEX-S3XE-1226-SM-4AD4L 1 B1 6 pieces up to 10x3.5 mm; focally sloughed epithelium 8.5 Bladder Bladder 0001255 160 422 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992269 341439 0.972469 0.994066 0.792203 24142 1 76 0.00201381 210 0 8.46094e+07 0.027248 618606 8.51145e+07 5.82957e+06 24172 4.21469e+07 0 0.180266 0.994066 0.787502 8.46094e+07 0.00265554 1.86264e+07 8.11871e+06 1.88036e+07 215 1.88108e+07 1.46045e+07 0.0023341 1.87632e+07 49.9367 0.00726793 0.995863 0 50.2368 GTEX-S3XE-1326-SM-4AD4H 1 B1 2 pieces 13x10 & 13x7 mm; glandular and stromal hyperplasia; a few urethral structures along one side of each piece 7.8 Prostate Prostate 0002367 169 413 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991139 330239 0.974343 0.992982 0.80071 23294 1 76 0.00191973 149 0 7.02807e+07 0.0253937 385457 7.07774e+07 4.52181e+06 23313 3.49817e+07 0 0.173633 0.992982 0.79509 7.02807e+07 0.00270766 1.54511e+07 5.7264e+06 1.55224e+07 166 1.55246e+07 1.20371e+07 0.00231296 1.55745e+07 50.0801 0.00544604 0.994825 0 50.1151 GTEX-S3XE-1526-SM-4AD5A 1 B1 2 pieces 10x8 & 9x9 mm; reduced spermatogenesis 7.7 Testis Testis 0000473 185 397 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990938 297554 0.940664 0.992768 0.759359 31601 1 76 0.0020856 141 0 6.74876e+07 0.0590388 689797 6.79792e+07 4.5474e+06 31648 3.36157e+07 0 0.181305 0.992768 0.753867 6.74876e+07 0.00267411 1.43595e+07 8.7571e+06 1.43866e+07 141 1.44493e+07 1.18662e+07 0.00237931 1.44088e+07 49.9299 0.0101472 0.994597 0 50.0471 GTEX-S3XE-1626-SM-3K2AJ 0 B1 2 pieces 13x7 & 12x5 mm; 20-30% loose fibrous component 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 205 377 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.909946 237715 0.972342 0.91477 0.806429 22403 1 76 0.0138277 121 0 6.77894e+07 0.0274333 303625 7.41054e+07 2.37383e+07 22420 3.35782e+07 0 0.165913 0.91477 0.737697 6.77894e+07 0.014923 1.47857e+07 9.70243e+06 1.49514e+07 127 1.50519e+07 1.08882e+07 0.0143725 1.50155e+07 49.9395 0.0040972 0.919594 0 50.2786 GTEX-S3XE-1726-SM-2XU9F 0 B1 6 pieces up to 9x3.6 mm; 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 207 375 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-1726-SM-3K2AM 0 B1 6 pieces up to 9x3.6 mm; 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 207 375 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.965622 190212 0.969554 0.971595 0.788688 22112 1 76 0.0140855 137 0 5.5157e+07 0.0302797 623558 5.67696e+07 1.80118e+07 22126 2.73185e+07 0 0.180867 0.971595 0.766285 5.5157e+07 0.0155074 1.20547e+07 9.23863e+06 1.21758e+07 124 1.22651e+07 8.09294e+06 0.0147921 1.22813e+07 50.0331 0.010984 0.977567 0 50.2501 GTEX-S3XE-1826-SM-2XU8Z 0 B1 2 pieces of 5mm artery; clean, no adipose; no sclerosis 7.4 Blood Vessel Artery - Tibial 0007610 215 367 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-1826-SM-3K2B4 0 B1 2 pieces of 5mm artery; clean, no adipose; no sclerosis 7.4 Blood Vessel Artery - Tibial 0007610 215 367 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.970497 179556 0.973865 0.976837 0.831239 20824 1 76 0.0137777 115 0 6.15448e+07 0.0258196 246777 6.30041e+07 2.0997e+07 20834 3.04635e+07 0 0.142626 0.976837 0.811985 6.15448e+07 0.0155071 1.32214e+07 6.95281e+06 1.33832e+07 127 1.34996e+07 1.07823e+07 0.0146368 1.34762e+07 49.9567 0.00391684 0.983178 0 50.3041 GTEX-S3XE-1926-SM-2XU8H 1 B1 4 pieces up to 11x5 mm; ~30% adipose in and around nerve bundles 6.3 Nerve Nerve - Tibial 0001323 218 364 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-1926-SM-3K2B3 1 B1 4 pieces up to 11x5 mm; ~30% adipose in and around nerve bundles 6.3 Nerve Nerve - Tibial 0001323 218 364 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.966373 196361 0.966929 0.972561 0.77786 23465 1 76 0.0139116 122 0 6.71241e+07 0.0328628 356854 6.90179e+07 2.39301e+07 23493 3.32363e+07 0 0.18907 0.972561 0.756516 6.71241e+07 0.0157143 1.46392e+07 8.983e+06 1.47868e+07 126 1.49009e+07 9.54512e+06 0.0148072 1.49229e+07 50.0368 0.00517046 0.978749 0 50.2507 GTEX-S3XE-2026-SM-2XU9P 1 B1 2 pieces 11x9 & 9x7 mm; <10% adipose; 8.5 Muscle Muscle - Skeletal 0011907 221 361 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S3XE-2026-SM-3K2B5 1 B1 2 pieces 11x9 & 9x7 mm; <10% adipose; 8.5 Muscle Muscle - Skeletal 0011907 221 361 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.76635 148963 0.979455 0.771179 0.873468 18412 1 76 0.0135388 110 0 4.91908e+07 0.0202848 840572 6.37865e+07 2.11987e+07 18415 2.43289e+07 0 0.105987 0.771179 0.673601 4.91908e+07 0.0159109 1.05066e+07 7.7368e+06 1.07616e+07 111 1.08173e+07 9.04541e+06 0.0147174 1.07055e+07 49.7402 0.0131779 0.776008 0 50.5994 GTEX-S4P3-0004-SM-2VCTW B1 Blood Whole Blood 0013756 105 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428020_R03C01 GTEX-S4P3-0004-SM-2XK2G B1 Blood Whole Blood 0013756 105 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311015_R06C01 GTEX-S4P3-0004-SM-4X5ZQ B1 Blood Whole Blood 0013756 105 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S4P3-0004-SM-5JK4R B1 Blood Whole Blood 0013756 105 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S4P3-0006-SM-2XU8F B1 8.4 Blood Whole Blood 0013756 105 BP-22094 RNA isolation_PAXgene Blood RNA (Manual) 02/03/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4P3-0006-SM-3K2AW B1 8.4 Blood Whole Blood 0013756 105 BP-22094 RNA isolation_PAXgene Blood RNA (Manual) 02/03/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.777707 583225 0.944472 0.783887 0.741769 18457 1 76 0.0145237 108 0 5.33361e+07 0.0549904 123363 6.80406e+07 2.57811e+07 18466 2.63433e+07 0 0.202704 0.783887 0.581463 5.33361e+07 0.0170981 1.13298e+07 3.35691e+07 1.14835e+07 110 1.16394e+07 8.82442e+06 0.0158008 1.15746e+07 49.8603 0.00181308 0.790067 0 50.3368 GTEX-S4P3-0008-SM-3NM8R B1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 230 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.992205 552036 0.972609 0.99414 0.832219 22624 1 76 0.00358947 300 0 1.19549e+08 0.0270334 377697 1.20254e+08 2.24515e+07 22656 5.95169e+07 0 0.14039 0.99414 0.827342 1.19549e+08 0.0045554 2.65276e+07 1.47047e+07 2.67065e+07 323 2.67958e+07 2.33747e+07 0.00407149 2.66541e+07 49.8674 0.00314083 0.996074 0 50.168 GTEX-S4P3-0226-SM-2XUAX 1 B1 2 pieces12x9 & 8x8 mm; <5% adipose 6.5 Thyroid Thyroid 0002046 167 1180 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4P3-0226-SM-3K2BD 1 B1 2 pieces12x9 & 8x8 mm; <5% adipose 6.5 Thyroid Thyroid 0002046 167 1180 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.970049 206436 0.963528 0.97604 0.740498 22854 1 76 0.0140641 112 0 5.34615e+07 0.0362572 290538 5.47738e+07 1.77728e+07 22879 2.64691e+07 0 0.22303 0.97604 0.722756 5.34615e+07 0.0148814 1.16202e+07 7.81222e+06 1.16812e+07 121 1.178e+07 6.80797e+06 0.0144703 1.18156e+07 50.0755 0.00530432 0.982032 0 50.1307 GTEX-S4P3-0326-SM-4AD6P 1 B1 6 pieces up to 8x1.3 mm; clean adventitia 6 Blood Vessel Artery - Aorta 0001496 176 1172 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990044 176729 0.972879 0.991855 0.825221 21439 1 76 0.00197784 128 0 5.93927e+07 0.0268224 238427 5.98804e+07 3.7985e+06 21455 2.9569e+07 0 0.147658 0.991855 0.818499 5.93927e+07 0.00270039 1.28839e+07 4.47603e+06 1.29292e+07 147 1.2911e+07 9.96861e+06 0.00233845 1.30067e+07 50.1846 0.00398172 0.993665 0 50.0877 GTEX-S4P3-0426-SM-4AD56 1 B1 6 pieces up to 6x4 mm; lots of good squamous mucosa 9.9 Esophagus Esophagus - Mucosa 0006920 223 1125 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991168 339791 0.978501 0.993178 0.834701 22306 1 76 0.00207026 280 0 9.3643e+07 0.0212065 416756 9.42863e+07 6.35445e+06 22324 4.66445e+07 0 0.143801 0.993178 0.829006 9.3643e+07 0.00284799 2.11881e+07 1.38796e+07 2.12859e+07 271 2.13593e+07 1.91964e+07 0.00245834 2.12949e+07 49.9244 0.00442011 0.995188 0 50.1151 GTEX-S4P3-0526-SM-4AD58 0 B1 6 pieces up to 9x4 mm; 8.2 Esophagus Esophagus - Muscularis 0004648 224 1125 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992544 251480 0.976562 0.994248 0.830947 22276 1 76 0.00190241 166 0 7.43322e+07 0.0231474 635032 7.47622e+07 5.10696e+06 22297 3.70344e+07 0 0.145614 0.994248 0.826168 7.43322e+07 0.00253117 1.60889e+07 6.43627e+06 1.61506e+07 189 1.6151e+07 1.29586e+07 0.00221625 1.62064e+07 50.0856 0.00849403 0.995953 0 50.0958 GTEX-S4P3-0626-SM-4AD59 1 B1 2 pieces 8x7 & 7x6 mm; larger has ~20% scarring, 30% parenchyma, and 50% adipose: smaller is ~80% adipose, 20% parenchyma 6.8 Pancreas Pancreas 0001150 177 1173 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991447 305353 0.979163 0.993237 0.850849 21968 1 76 0.00218909 124 0 8.12304e+07 0.0204219 257076 8.17836e+07 5.25537e+06 21989 4.04523e+07 0 0.128313 0.993237 0.845094 8.12304e+07 0.00300687 1.86207e+07 1.70013e+07 1.87679e+07 141 1.87515e+07 2.23723e+07 0.00259725 1.87845e+07 50.0439 0.00314337 0.995026 0 50.1968 GTEX-S4P3-0726-SM-4AD57 1 B1 6 pieces up to 9x4 mm; 4 have well preserved oxyntic mucosa, 2 have only muscularis 8.5 Stomach Stomach 0000945 183 1167 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991443 270956 0.97725 0.993337 0.834856 21614 1 76 0.00180959 135 0 5.88763e+07 0.0224621 238100 5.92713e+07 3.65755e+06 21626 2.93215e+07 0 0.142394 0.993337 0.829293 5.88763e+07 0.00258681 1.28838e+07 4.81852e+06 1.29422e+07 142 1.29389e+07 1.11268e+07 0.00219746 1.29964e+07 50.111 0.00401712 0.995231 0 50.113 GTEX-S4P3-0926-SM-4AD54 1 B1 2 pieces 10x10 & 10x7 mm; atrophic, no ova, corpora albicantia 6.8 Ovary Ovary 0000992 193 1158 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.988693 244097 0.967677 0.990398 0.744622 24037 1 76 0.00195704 170 0 8.74977e+07 0.0320839 212669 8.8346e+07 5.72323e+06 24082 4.35695e+07 0 0.223055 0.990398 0.737471 8.74977e+07 0.00258598 1.92531e+07 9.65718e+06 1.92739e+07 200 1.92814e+07 1.47636e+07 0.00227097 1.93931e+07 50.1443 0.00240723 0.992102 0 50.0271 GTEX-S4P3-1126-SM-4AD52 1 B1 6 pieces up to 10x4 mm; 7.4 Vagina Vagina 0000996 205 1148 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990684 255422 0.973619 0.992749 0.758124 23285 1 76 0.00209085 136 0 6.7473e+07 0.0261513 257089 6.79658e+07 4.34506e+06 23307 3.35909e+07 0 0.215495 0.992749 0.752627 6.7473e+07 0.00286471 1.50205e+07 7.3081e+06 1.50281e+07 151 1.50598e+07 1.07976e+07 0.00247697 1.51236e+07 50.1056 0.00378262 0.994813 0 50.0127 GTEX-S4P3-1226-SM-4AD4Y 1 B1 6 pieces up to 7x4 mm; surface sloughing; 6.6 Colon Colon - Transverse 0001157 210 1143 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990651 257907 0.973723 0.992595 0.802117 23769 1 76 0.0020094 204 0 7.98568e+07 0.0259188 1.36388e+06 8.04526e+07 5.00407e+06 23801 3.97642e+07 0 0.171606 0.992595 0.796177 7.98568e+07 0.00271645 1.7662e+07 8.98392e+06 1.77709e+07 239 1.77127e+07 1.02479e+07 0.00236224 1.78578e+07 50.2039 0.0169526 0.994538 0 50.1537 GTEX-S4P3-1326-SM-4AD6V 1 B1 2 pieces 9x8 & 13x10 mm; large ducts, no lobules; 80-90% adipose; central unfixed adipose especially in large piece 9.3 Breast Breast - Mammary Tissue 0008367 216 1138 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991451 344010 0.968355 0.993161 0.777969 23536 1 76 0.00203459 136 0 6.44017e+07 0.0313181 272896 6.48452e+07 4.05656e+06 23565 3.20699e+07 0 0.190386 0.993161 0.772649 6.44017e+07 0.00272308 1.41053e+07 9.2689e+06 1.4166e+07 152 1.41775e+07 1.01571e+07 0.00237824 1.42051e+07 50.0487 0.00420842 0.994872 0 50.1072 GTEX-S4P3-1526-SM-3K2AV 1 B1 2 pieces 15x13 & 13x10 mm; excessively large aliquots with large central unfixed holes 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 219 1136 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.937345 253375 0.973854 0.943607 0.828136 22537 1 76 0.0139064 126 0 7.38753e+07 0.0258994 455853 7.82904e+07 2.47003e+07 22555 3.6575e+07 0 0.145717 0.943607 0.781435 7.38753e+07 0.0156034 1.60742e+07 1.21132e+07 1.62878e+07 144 1.64117e+07 1.05715e+07 0.0147492 1.63979e+07 49.979 0.00582259 0.949869 0 50.33 GTEX-S4P3-1526-SM-E9J3W 1 B1 2 pieces 15x13 & 13x10 mm; excessively large aliquots with large central unfixed holes 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 219 1136 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.988112 561144 0.979426 0.989157 0.849889 22035 1 76 0.00176989 195 0 7.90115e+07 0.0202866 343341 7.98777e+07 3.88346e+06 22050 3.93578e+07 0 0.129536 0.989157 0.840674 7.90115e+07 0.00265994 1.74522e+07 6.68939e+06 1.76118e+07 216 1.75406e+07 1.40395e+07 0.00221445 1.76066e+07 50.0938 0.00429834 0.990203 0 50.2276 GTEX-S4P3-1626-SM-2XUAB 0 B1 2 pieces 9x9 & 9x5 mm; clean except for a 1 mm nodule of fibroadipose 8.1 Muscle Muscle - Skeletal 0011907 237 1119 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4P3-1626-SM-3K2AZ 0 B1 2 pieces 9x9 & 9x5 mm; clean except for a 1 mm nodule of fibroadipose 8.1 Muscle Muscle - Skeletal 0011907 237 1119 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.744465 134047 0.979649 0.747304 0.873788 18796 1 76 0.0131751 104 0 5.14559e+07 0.0201225 827383 6.88554e+07 2.41358e+07 18804 2.54827e+07 0 0.10586 0.747304 0.652986 5.14559e+07 0.0142844 1.12307e+07 7.07756e+06 1.1466e+07 108 1.14997e+07 9.78105e+06 0.0137277 1.13626e+07 49.7003 0.0120162 0.750144 0 50.5184 GTEX-S4P3-1826-SM-2XU8N 0 B1 2 pieces 2 mm artery 7 Blood Vessel Artery - Tibial 0007610 241 1116 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4P3-1826-SM-3K2AL 0 B1 2 pieces 2 mm artery 7 Blood Vessel Artery - Tibial 0007610 241 1116 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.952985 292194 0.972735 0.959144 0.831185 23654 1 76 0.0139424 170 0 1.08654e+08 0.02692 422015 1.13283e+08 3.83631e+07 23680 5.37837e+07 0 0.14155 0.959144 0.797226 1.08654e+08 0.0158725 2.32954e+07 1.30735e+07 2.35559e+07 198 2.37237e+07 1.8792e+07 0.0149012 2.37684e+07 50.0471 0.00372533 0.965302 0 50.2781 GTEX-S4Q7-0001-SM-2VCU1 B1 Blood Whole Blood 0013756 -157 BP-22096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2012 GTEx_5M_batch6_Apr12 05/03/2012 Illumina OMNI SNP Array OMNI 7319532002_R01C01 GTEX-S4Q7-0001-SM-2XK2L B1 Blood Whole Blood 0013756 -157 BP-22096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172005_R04C02 GTEX-S4Q7-0001-SM-3UZFN B1 Blood Whole Blood 0013756 -157 BP-22096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-S4Q7-0001-SM-5JK3A B1 Blood Whole Blood 0013756 -157 BP-22096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/03/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S4Q7-0003-SM-3NM8M B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -157 BP-25565 RNA isolation_Trizol Manual (Cell Pellet) 05/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990533 1.46074e+06 0.961808 0.992765 0.745619 23940 1 76 0.00409489 286 0 1.2771e+08 0.0375884 1.27222e+06 1.28641e+08 2.52178e+07 24004 6.35036e+07 0 0.216189 0.992765 0.740224 1.2771e+08 0.00507948 2.82229e+07 2.48995e+07 2.82817e+07 287 2.8411e+07 2.61671e+07 0.00458607 2.83749e+07 49.9682 0.00988968 0.994997 0 50.0519 GTEX-S4Q7-0006-SM-2XUA8 B1 9.2 Blood Whole Blood 0013756 -157 BP-22094 RNA isolation_PAXgene Blood RNA (Manual) 02/03/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-0006-SM-3K2AT B1 9.2 Blood Whole Blood 0013756 -157 BP-22094 RNA isolation_PAXgene Blood RNA (Manual) 02/03/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.953605 373974 0.960002 0.959448 0.798383 18359 1 76 0.0143323 106 0 5.3275e+07 0.0396256 199910 5.55268e+07 1.85207e+07 18367 2.63886e+07 0 0.16162 0.959448 0.766007 5.3275e+07 0.015249 1.16894e+07 2.76953e+07 1.17654e+07 119 1.18926e+07 1.02357e+07 0.0147879 1.1876e+07 49.9651 0.00360025 0.965292 0 50.1621 GTEX-S4Q7-0008-SM-3NM8A B1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 212 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.993483 419724 0.975854 0.994954 0.834526 23290 1 76 0.00357288 292 0 1.37873e+08 0.0237646 397039 1.38572e+08 2.53449e+07 23329 6.86926e+07 0 0.141328 0.994954 0.830315 1.37873e+08 0.00427928 3.07868e+07 1.43685e+07 3.08556e+07 314 3.09345e+07 2.85599e+07 0.00392556 3.08954e+07 49.9684 0.00286522 0.996425 0 50.0558 GTEX-S4Q7-0126-SM-4AD5P 1 B1 2 aliquots, ~12x8mm 3.1 Spleen Spleen 0002106 93 480 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.986061 833393 0.946449 0.987748 0.818566 23716 1 76 0.00249498 211 0 8.57108e+07 0.0525009 397226 8.67739e+07 5.82993e+06 23738 4.26442e+07 0 0.127882 0.987748 0.808538 8.57108e+07 0.00323166 1.84934e+07 3.16026e+07 1.8643e+07 241 1.86214e+07 1.37088e+07 0.00286269 1.86803e+07 50.0789 0.00457771 0.989435 0 50.2014 GTEX-S4Q7-0226-SM-4AD5O 1 B1 2 aliquots, 7x6mm. All cortex, well-preserved 9.2 Adrenal Gland Adrenal Gland 0002369 98 475 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.99286 215768 0.978924 0.994599 0.846421 21672 1 76 0.00204257 130 0 6.30628e+07 0.0206508 946366 6.34053e+07 4.07864e+06 21687 3.14199e+07 0 0.132503 0.994599 0.841849 6.30628e+07 0.00267063 1.4006e+07 6.36247e+06 1.40817e+07 153 1.41037e+07 1.1452e+07 0.00235605 1.40787e+07 49.9556 0.0149257 0.996338 0 50.1348 GTEX-S4Q7-0326-SM-2XUAU 0 B1 2 aliquots, ~12x8mm. Diffuse Hashimoto's/lymphocytic thyroiditis. Germinal centers encircled. 7.8 Thyroid Thyroid 0002046 111 462 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-0326-SM-3K2B1 0 B1 2 aliquots, ~12x8mm. Diffuse Hashimoto's/lymphocytic thyroiditis. Germinal centers encircled. 7.8 Thyroid Thyroid 0002046 111 462 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.966535 261549 0.962588 0.971584 0.746336 24431 1 76 0.0141902 105 0 7.21157e+07 0.0368217 263050 7.42249e+07 2.30449e+07 24466 3.57484e+07 0 0.216252 0.971584 0.725128 7.21157e+07 0.0148376 1.56754e+07 1.17175e+07 1.58216e+07 118 1.59403e+07 1.05375e+07 0.0145122 1.58933e+07 49.9261 0.00354396 0.976633 0 50.2321 GTEX-S4Q7-0426-SM-2XUAZ 1 B1 2 aliquots, ~9x7mm. Diffuse mild chronic active pneumonitis and edema 8.4 Lung Lung 0008952 118 455 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-0426-SM-3K2BJ 1 B1 2 aliquots, ~9x7mm. Diffuse mild chronic active pneumonitis and edema 8.4 Lung Lung 0008952 118 455 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.93291 328218 0.969211 0.939591 0.807463 23858 1 76 0.0138783 119 0 7.27241e+07 0.030463 296557 7.73998e+07 2.66403e+07 23876 3.59833e+07 0 0.161749 0.939591 0.758684 7.27241e+07 0.0154796 1.58726e+07 1.27731e+07 1.60678e+07 124 1.62713e+07 1.27901e+07 0.0146733 1.6153e+07 49.8175 0.00383149 0.946271 0 50.3056 GTEX-S4Q7-0526-SM-4AD5N 1 B1 6 pieces, ~9x3mm. 8.6 Esophagus Esophagus - Muscularis 0004648 131 442 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992086 261892 0.976951 0.993917 0.837761 22443 1 76 0.00199798 170 0 7.47161e+07 0.0227761 309951 7.51734e+07 5.01385e+06 22462 3.72177e+07 0 0.13919 0.993917 0.832665 7.47161e+07 0.00273953 1.64579e+07 6.32741e+06 1.65752e+07 189 1.65707e+07 1.36694e+07 0.00236807 1.6594e+07 50.0351 0.00412315 0.995747 0 50.1776 GTEX-S4Q7-0626-SM-4AD5M 0 B1 6 pieces, ~7x2mm. Squamous mucosa well preserved, ~15-20% of thickness. Submucosal mucus glands encircled 8.6 Esophagus Esophagus - Mucosa 0006920 138 435 BP-23024 RNA isolation_PAXgene Tissue miRNA 03/12/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991737 332440 0.973824 0.993438 0.823711 22287 1 76 0.00212375 166 0 7.29699e+07 0.0257805 394051 7.34519e+07 5.01761e+06 22308 3.63497e+07 0 0.150113 0.993438 0.818306 7.29699e+07 0.00282773 1.63708e+07 1.00031e+07 1.64458e+07 167 1.64666e+07 1.41973e+07 0.00247513 1.64724e+07 50.0088 0.00536475 0.995139 0 50.1143 GTEX-S4Q7-0726-SM-4AD5F 0 B1 6 pieces,~10x2.5mm. Mucosa extremely well preserved, 30-50% of thickness. Basal lymphoid aggregates encircled 7.3 Stomach Stomach 0000945 144 429 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.987812 238042 0.975734 0.989915 0.827888 22967 1 76 0.00215913 207 0 7.17782e+07 0.0239666 988903 7.25095e+07 4.79322e+06 22988 3.57277e+07 0 0.147846 0.989915 0.819539 7.17782e+07 0.00288102 1.61712e+07 2.68909e+07 1.63331e+07 185 1.63362e+07 1.40268e+07 0.00251931 1.63126e+07 49.9639 0.0136383 0.992019 0 50.249 GTEX-S4Q7-0826-SM-4AD5E 1 B1 6 pieces, ~9x3mm. Mucosa reasonably well-preserved, ~10% of thickness 7.1 Colon Colon - Transverse 0001157 155 418 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990389 261029 0.974106 0.992308 0.800866 23301 1 76 0.00258816 164 0 7.06512e+07 0.0247938 895344 7.11989e+07 4.86833e+06 23331 3.5153e+07 0 0.17324 0.992308 0.794706 7.06512e+07 0.00313722 1.57383e+07 8.6205e+06 1.58026e+07 176 1.57838e+07 1.0098e+07 0.00286216 1.58802e+07 50.1521 0.0125752 0.994227 0 50.102 GTEX-S4Q7-0926-SM-4AD5D 1 B1 7 pieces, ~7x3.5mm. Urothelium remarkably well-preserved, ~2-3% of thickness 7.7 Bladder Bladder 0001255 161 412 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990838 290714 0.973011 0.993009 0.801211 23205 1 76 0.00202882 131 0 6.1337e+07 0.0266825 212377 6.17688e+07 3.68304e+06 23225 3.05295e+07 0 0.1718 0.993009 0.79561 6.1337e+07 0.00277657 1.3458e+07 5.39762e+06 1.34897e+07 141 1.35107e+07 1.09892e+07 0.00240188 1.35657e+07 50.1015 0.00343826 0.995181 0 50.0589 GTEX-S4Q7-1026-SM-4AD75 1 B1 2 aliquots, ~10x8mm. Glandular epithelium remarkably well-preserved, prominent glandular hyperplasia 8.1 Prostate Prostate 0002367 170 403 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992374 336582 0.963481 0.993836 0.707244 24327 1 76 0.00226434 133 0 6.74377e+07 0.0363169 204653 6.78559e+07 4.29169e+06 24360 3.35906e+07 0 0.256237 0.993836 0.702884 6.74377e+07 0.00279867 1.48628e+07 6.29181e+06 1.49503e+07 142 1.49815e+07 9.09428e+06 0.00253111 1.49252e+07 49.9059 0.00301599 0.995298 0 50.1468 GTEX-S4Q7-1126-SM-4AD6R 0 B1 2 aliquots, ~18x9mm. Male ductal units well-seen in one, examples encircled 6.9 Breast Breast - Mammary Tissue 0008367 178 395 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991912 296320 0.975538 0.993634 0.82615 22314 1 76 0.0020619 162 0 7.22589e+07 0.024193 373065 7.27218e+07 4.81874e+06 22334 3.59943e+07 0 0.149388 0.993634 0.82089 7.22589e+07 0.00269821 1.58661e+07 7.04459e+06 1.59343e+07 179 1.59244e+07 1.24935e+07 0.0023795 1.59963e+07 50.1126 0.00513003 0.995356 0 50.1072 GTEX-S4Q7-1226-SM-4AD5I 1 B1 2 aliquots, ~12x7mm. Spermatogenesis appears markedly reduced 8 Testis Testis 0000473 184 389 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989677 411937 0.934376 0.991908 0.746977 32507 1 76 0.00214371 170 0 8.13736e+07 0.0652705 522074 8.20375e+07 5.64266e+06 32564 4.05111e+07 0 0.187399 0.991908 0.740932 8.13736e+07 0.00275924 1.70353e+07 1.07709e+07 1.70737e+07 165 1.71831e+07 1.48202e+07 0.00245078 1.70906e+07 49.865 0.00636385 0.994139 0 50.0563 GTEX-S4Q7-1326-SM-4AD74 0 B1 2 aliquots, ~4.5mm d. Fairly clean specimens 7 Blood Vessel Artery - Tibial 0007610 202 371 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989079 248254 0.974759 0.990585 0.835559 22412 1 76 0.00213074 195 0 8.32374e+07 0.0248975 259799 8.40285e+07 5.42911e+06 22434 4.14417e+07 0 0.1392 0.990585 0.827692 8.32374e+07 0.0028572 1.80108e+07 6.51661e+06 1.80747e+07 206 1.80676e+07 1.59102e+07 0.00249342 1.81445e+07 50.1061 0.0030918 0.992091 0 50.0885 GTEX-S4Q7-1426-SM-2XU8I 0 B1 2 aliquots, ~2.5mm d. LDACC NOTE: Rim of fat/fibrous tissue up to ~1mm, discontinuous 6.8 Nerve Nerve - Tibial 0001323 203 370 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-1426-SM-3K2B9 0 B1 2 aliquots, ~2.5mm d. LDACC NOTE: Rim of fat/fibrous tissue up to ~1mm, discontinuous 6.8 Nerve Nerve - Tibial 0001323 203 370 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.311525 79272 0.962388 0.312625 0.751285 21029 1 76 0.0138296 117 0 2.61021e+07 0.0372566 115693 8.34933e+07 2.92173e+07 21041 1.27381e+07 0 0.211103 0.312625 0.23487 2.61021e+07 0.0181071 5.61153e+06 4.20082e+06 5.80635e+06 119 5.80667e+06 3.65645e+06 0.0159608 5.69416e+06 49.5109 0.00138566 0.313725 0 50.8531 GTEX-S4Q7-1526-SM-2XU9C 0 B1 2 aliquots, 11x7mm. Minimal interstitial fat. 8.4 Muscle Muscle - Skeletal 0011907 206 367 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-1526-SM-3K2AG 0 B1 2 aliquots, 11x7mm. Minimal interstitial fat. 8.4 Muscle Muscle - Skeletal 0011907 206 367 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.957696 201265 0.980163 0.963358 0.871659 20111 1 76 0.0136554 137 0 6.10144e+07 0.0196064 700752 6.33351e+07 2.07546e+07 20114 3.02325e+07 0 0.108504 0.963358 0.839719 6.10144e+07 0.0151376 1.31736e+07 7.56224e+06 1.33258e+07 123 1.34418e+07 1.15845e+07 0.0143922 1.33744e+07 49.8743 0.0110642 0.96902 0 50.2871 GTEX-S4Q7-1626-SM-2XU8B 0 B1 2 aliquots, ~10x9mm. 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 208 365 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Q7-1626-SM-3K2AE 0 B1 2 aliquots, ~10x9mm. 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 208 365 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.975571 183475 0.974434 0.980869 0.818051 22062 1 76 0.0137377 115 0 5.59346e+07 0.0253081 132050 5.70256e+07 1.61649e+07 22077 2.77288e+07 0 0.156383 0.980869 0.802401 5.59346e+07 0.0150779 1.2218e+07 7.25376e+06 1.23345e+07 121 1.24286e+07 9.76631e+06 0.0144042 1.24089e+07 49.9602 0.00231563 0.986167 0 50.2372 GTEX-S4UY-0003-SM-2VCTU C1 Blood Whole Blood 0013756 212 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762428020_R02C01 GTEX-S4UY-0003-SM-2XK2Q C1 Blood Whole Blood 0013756 212 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7991783154_R03C01 GTEX-S4UY-0003-SM-4X61Q C1 Blood Whole Blood 0013756 212 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S4UY-0003-SM-5JK3Y C1 Blood Whole Blood 0013756 212 BP-22044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/01/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S4UY-0006-SM-3K2A7 C1 8.1 Blood Whole Blood 0013756 212 BP-22035 RNA isolation_PAXgene Blood RNA (Manual) 02/01/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.63795 264536 0.956392 0.642051 0.751157 19190 1 76 0.0145281 131 0 2.79306e+07 0.0429227 116585 4.35022e+07 1.63352e+07 19196 1.37466e+07 0 0.205234 0.642051 0.482281 2.79306e+07 0.017193 6.07883e+06 1.71553e+07 6.20871e+06 151 6.2653e+06 4.7833e+06 0.015852 6.19923e+06 49.735 0.00267998 0.646151 0 50.5285 GTEX-S4UY-0008-SM-3NM8H C1 8.5 Skin Cells - Cultured fibroblasts EFO_0002009 324 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.993084 554199 0.973819 0.994755 0.842209 22510 1 76 0.00352729 304 0 1.35094e+08 0.02579 508240 1.35806e+08 2.51255e+07 22540 6.72817e+07 0 0.13161 0.994755 0.837792 1.35094e+08 0.00440591 3.00739e+07 1.74849e+07 3.01665e+07 323 3.02514e+07 2.80859e+07 0.00396586 3.02055e+07 49.962 0.00374239 0.996426 0 50.0769 GTEX-S4UY-0126-SM-2XU9R 0 C1 6pieces, 6.5x2.5mm, squamous epithelium is ~1-3% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 323 750 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4UY-0126-SM-3K2BB 0 C1 6pieces, 6.5x2.5mm, squamous epithelium is ~1-3% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 323 750 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.773699 175330 0.968515 0.776741 0.806461 21703 1 76 0.0135854 136 0 4.78968e+07 0.0312258 274368 6.16638e+07 1.87557e+07 21719 2.37038e+07 0 0.162055 0.776741 0.626411 4.78968e+07 0.014569 1.03269e+07 8.12662e+06 1.04372e+07 119 1.04708e+07 8.0238e+06 0.0140753 1.04672e+07 49.9914 0.00444942 0.779782 0 50.2656 GTEX-S4UY-0226-SM-3K2AP 0 C1 2 aliquots, 8x6mm 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 326 748 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.863013 421590 0.96942 0.868266 0.789941 25835 1 76 0.0138416 376 0 1.46597e+08 0.0302967 789126 1.68839e+08 5.55042e+07 25888 7.25981e+07 0 0.179479 0.868266 0.685878 1.46597e+08 0.0154944 3.18377e+07 2.37083e+07 3.21945e+07 336 3.24597e+07 2.15799e+07 0.014663 3.23732e+07 49.9333 0.00467384 0.873519 0 50.2786 GTEX-S4UY-0426-SM-2XU8M 0 C1 2 aliquots, ~1.5mm d. 7.3 Blood Vessel Artery - Tibial 0007610 352 724 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4UY-0426-SM-3K2AF 0 C1 2 aliquots, ~1.5mm d. 7.3 Blood Vessel Artery - Tibial 0007610 352 724 BP-22873 RNA isolation_PAXgene Tissue miRNA 03/05/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.957428 189084 0.968874 0.962781 0.825427 20860 1 76 0.0137384 109 0 6.19443e+07 0.030829 256899 6.4339e+07 1.81878e+07 20872 3.07058e+07 0 0.143446 0.962781 0.794706 6.19443e+07 0.0152717 1.31617e+07 7.59596e+06 1.33707e+07 114 1.34347e+07 1.08269e+07 0.0145008 1.34096e+07 49.9533 0.0039929 0.968134 0 50.3939 GTEX-S4UY-0526-SM-2XUA3 0 C1 2 aliquots, ~7x6mm. Minimal (<5%) interstitial fat 9 Muscle Muscle - Skeletal 0011907 362 714 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4UY-0526-SM-3K2AN 0 C1 2 aliquots, ~7x6mm. Minimal (<5%) interstitial fat 9 Muscle Muscle - Skeletal 0011907 362 714 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.971503 169364 0.979191 0.976168 0.864919 20358 1 76 0.0137167 137 0 7.37479e+07 0.0205479 649091 7.55484e+07 2.56481e+07 20366 3.66099e+07 0 0.114271 0.976168 0.844306 7.37479e+07 0.0146201 1.6001e+07 1.04496e+07 1.62282e+07 139 1.62706e+07 1.38563e+07 0.0141663 1.62598e+07 49.9833 0.00859172 0.980832 0 50.3526 GTEX-S4UY-0626-SM-2XUAQ 0 C1 2 aliquots, ~7x6mm, diffuse lymphocytic/Hashimoto's thyroiditis with prominent regressive changes 7 Thyroid Thyroid 0002046 403 674 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4UY-0626-SM-3K2AO 0 C1 2 aliquots, ~7x6mm, diffuse lymphocytic/Hashimoto's thyroiditis with prominent regressive changes 7 Thyroid Thyroid 0002046 403 674 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.974329 237570 0.958722 0.980324 0.722442 24245 1 76 0.0146832 106 0 5.98092e+07 0.03969 988894 6.10096e+07 1.82989e+07 24279 2.95643e+07 0 0.23628 0.980324 0.708227 5.98092e+07 0.0157881 1.30453e+07 1.29994e+07 1.31111e+07 122 1.32024e+07 6.21009e+06 0.0152323 1.3274e+07 50.1351 0.0162088 0.986318 0 50.1257 GTEX-S4UY-0726-SM-4AD6X 0 C1 2 aliquots, ~7x5mm. Post-menopausal TDLUs present, encricled 7.4 Breast Breast - Mammary Tissue 0008367 406 672 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991494 276782 0.967863 0.99329 0.78198 24209 1 76 0.002128 141 0 6.70646e+07 0.0317561 498170 6.75177e+07 4.44762e+06 24236 3.33973e+07 0 0.185883 0.99329 0.776733 6.70646e+07 0.00279593 1.47405e+07 7.17951e+06 1.48379e+07 160 1.48194e+07 1.05758e+07 0.00246136 1.48742e+07 50.0923 0.00737836 0.995085 0 50.1647 GTEX-S4UY-0826-SM-4AD4Z 1 C1 6 pieces, ~6x2mm; mucosa moderately well-preserved, ~10-15% of thickness 7.4 Colon Colon - Transverse 0001157 411 668 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989337 1.56016e+06 0.909294 0.991052 0.709594 24393 1 76 0.0020978 169 0 8.11297e+07 0.0901156 1.35395e+06 8.18622e+07 4.95327e+06 24426 4.04043e+07 0 0.199701 0.991052 0.703244 8.11297e+07 0.00271904 1.67473e+07 6.22415e+07 1.70444e+07 183 1.70303e+07 1.07798e+07 0.00240788 1.69222e+07 49.8407 0.0165394 0.992767 0 50.4396 GTEX-S4UY-0926-SM-4AD6O 1 C1 6 pieces, ~6x4 mm; urothelium unusually well-preserved, ~5% of thickness 8.3 Bladder Bladder 0001255 417 663 BP-22895 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991563 284844 0.968034 0.993436 0.758423 24770 1 76 0.00220833 143 0 7.26281e+07 0.0314278 348322 7.3108e+07 4.91798e+06 24802 3.6159e+07 0 0.209611 0.993436 0.753445 7.26281e+07 0.00279091 1.60274e+07 7.43257e+06 1.60955e+07 160 1.61117e+07 1.19205e+07 0.00249907 1.61399e+07 50.0438 0.00476449 0.995309 0 50.1059 GTEX-S4UY-1026-SM-4AD53 1 C1 2 aliquots, ~9x6.5mm. Post-menopausal atrophic changes 8.2 Ovary Ovary 0000992 421 661 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.990161 280845 0.974257 0.992236 0.794627 23048 1 76 0.00213305 141 0 7.14458e+07 0.0255158 231964 7.20049e+07 4.67647e+06 23073 3.55731e+07 0 0.179629 0.992236 0.788458 7.14458e+07 0.00287195 1.59668e+07 9.80721e+06 1.59803e+07 162 1.60158e+07 1.2928e+07 0.00250173 1.60747e+07 50.0918 0.0032215 0.994311 0 50.0211 GTEX-S4UY-1226-SM-4AD51 1 C1 2 aliquots ~8x7mm. One has remote placental implantation site scarring, encircled. No endometrial glandular or stromal tissue is evident 8 Uterus Uterus 0000995 427 656 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990606 243199 0.969335 0.992499 0.800861 22232 1 76 0.00195634 129 0 5.89795e+07 0.0303065 166493 5.94252e+07 3.69588e+06 22259 2.93671e+07 0 0.168474 0.992499 0.794854 5.89795e+07 0.00260287 1.28312e+07 5.4102e+06 1.28564e+07 136 1.2862e+07 1.07675e+07 0.00227899 1.29347e+07 50.1408 0.00280172 0.994392 0 50.0491 GTEX-S4UY-1326-SM-4AD4X 1 C1 6 pieces, 7x2.5mm. Squamous mucosa is ~10% of thickness 7.9 Vagina Vagina 0000996 428 658 BP-22899 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991249 424299 0.963481 0.993257 0.766477 24697 1 76 0.00202791 210 0 8.70888e+07 0.0362594 418838 8.768e+07 6.0523e+06 24729 4.33697e+07 0 0.197005 0.993257 0.761308 8.70888e+07 0.00267092 1.89214e+07 1.23127e+07 1.90703e+07 228 1.9093e+07 1.42774e+07 0.00234876 1.90659e+07 49.9646 0.00477689 0.995265 0 50.1959 GTEX-S4UY-1426-SM-4AD6Y 1 C1 4 aliquots, ~6x4mm. Squamous mucosa present on 2 of 4 pieces, ~5% of thickness. No dysplasia evident 6.8 Cervix Uteri Cervix - Ectocervix 0012249 433 654 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989119 324040 0.969142 0.991324 0.788106 23675 1 76 0.00204559 156 0 7.28435e+07 0.0305157 163671 7.3481e+07 4.83057e+06 23709 3.62444e+07 0 0.181036 0.991324 0.781269 7.28435e+07 0.00278612 1.59224e+07 7.19814e+06 1.59899e+07 165 1.60093e+07 1.29944e+07 0.00241503 1.60608e+07 50.0802 0.00222739 0.993529 0 50.1057 GTEX-S4UY-1626-SM-4AD55 0 C1 6 pieces, ~6x4mm pieces. Mucosa extremely well-preserved, ~20-30% of thickness 7.4 Stomach Stomach 0000945 439 650 BP-22893 RNA isolation_PAXgene Tissue miRNA 03/06/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989941 175101 0.974687 0.991625 0.811388 23023 1 76 0.0021752 258 0 7.12492e+07 0.0248124 1.24358e+06 7.18509e+07 4.69378e+06 23045 3.54868e+07 0 0.163298 0.991625 0.804593 7.12492e+07 0.00283746 1.60981e+07 4.18509e+07 1.6222e+07 206 1.61851e+07 1.31858e+07 0.00250577 1.62482e+07 50.0972 0.0173077 0.99331 0 50.1917 GTEX-S4Z8-0003-SM-2VCTZ B1 Blood Whole Blood 0013756 -40 BP-22150 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/06/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762330002_R01C01 GTEX-S4Z8-0003-SM-2XK2M B1 Blood Whole Blood 0013756 -40 BP-22150 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/06/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985172006_R06C01 GTEX-S4Z8-0003-SM-4X62P B1 Blood Whole Blood 0013756 -40 BP-22150 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/06/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S4Z8-0003-SM-5JK3I B1 Blood Whole Blood 0013756 -40 BP-22150 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/06/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S4Z8-0006-SM-2XU8E B1 8.2 Blood Whole Blood 0013756 -40 BP-22295 RNA isolation_PAXgene Blood RNA (Manual) 02/09/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-0006-SM-3K2AQ B1 8.2 Blood Whole Blood 0013756 -40 BP-22295 RNA isolation_PAXgene Blood RNA (Manual) 02/09/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.966791 503934 0.9571 0.973561 0.799382 18751 1 76 0.0144492 106 0 6.01688e+07 0.0424494 178445 6.18028e+07 2.09974e+07 18762 2.97739e+07 0 0.157718 0.973561 0.778247 6.01688e+07 0.0167344 1.30874e+07 3.55722e+07 1.32023e+07 120 1.33702e+07 1.17217e+07 0.0155839 1.3325e+07 49.9154 0.00288733 0.980331 0 50.2185 GTEX-S4Z8-0008-SM-33HAZ B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 182 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.941308 614002 0.973943 0.943933 0.845657 21725 1 76 0.00188985 234 0 1.18618e+08 0.0256537 589323 1.25663e+08 1.06298e+07 21750 5.88652e+07 0 0.128286 0.943933 0.798244 1.18618e+08 0.00592835 2.62055e+07 1.8479e+07 2.66254e+07 254 2.66889e+07 2.77763e+07 0.00390348 2.64913e+07 49.8141 0.00468971 0.946559 0 50.3974 GTEX-S4Z8-0126-SM-4GICC 1 B1 2 pieces 10x6 & 8x7 mm; cortex 9.1 Adrenal Gland Adrenal Gland 0002369 96 1030 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.989045 457629 0.976677 0.991974 0.847227 22620 1 76 0.00226963 269 0 9.38349e+07 0.0229914 1.56504e+06 9.45941e+07 9.05323e+06 22645 4.66693e+07 0 0.129451 0.991974 0.840427 9.38349e+07 0.00365 2.07439e+07 1.08243e+07 2.07998e+07 312 2.08234e+07 1.52776e+07 0.00295778 2.09795e+07 50.1866 0.0165448 0.994903 0 50.0673 GTEX-S4Z8-0226-SM-4AD5K 1 B1 2 pieces 9x8 & 9x7 mm; mild congestion 7.4 Spleen Spleen 0002106 104 1023 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.987194 317712 0.96511 0.989354 0.80111 24399 1 76 0.00266054 201 0 8.37964e+07 0.0330891 489842 8.46981e+07 5.8211e+06 24423 4.16381e+07 0 0.164 0.989354 0.792581 8.37964e+07 0.00343315 1.84413e+07 1.17018e+07 1.85291e+07 213 1.85693e+07 1.29496e+07 0.003046 1.85758e+07 50.0088 0.00578339 0.991513 0 50.1188 GTEX-S4Z8-0326-SM-2XUAS 0 B1 2 pieces 11x9 & 9x4 mm; 1, 4mm cystic follicle 8.7 Thyroid Thyroid 0002046 113 1015 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-0326-SM-3K2AU 0 B1 2 pieces 11x9 & 9x4 mm; 1, 4mm cystic follicle 8.7 Thyroid Thyroid 0002046 113 1015 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.962819 255880 0.968351 0.967926 0.781871 24185 1 76 0.0138244 113 0 7.40548e+07 0.0313729 169460 7.65087e+07 2.61212e+07 24209 3.67191e+07 0 0.18648 0.967926 0.756793 7.40548e+07 0.0151462 1.61762e+07 9.9327e+06 1.62817e+07 123 1.64369e+07 1.25842e+07 0.0144818 1.63781e+07 49.9105 0.00221491 0.973032 0 50.1625 GTEX-S4Z8-0426-SM-2XUA2 0 B1 2 pieces 11x8 & 10x8 mm; no congestion or exudates 8.4 Lung Lung 0008952 118 1011 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-0426-SM-3K2AH 0 B1 2 pieces 11x8 & 10x8 mm; no congestion or exudates 8.4 Lung Lung 0008952 118 1011 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.961505 207354 0.975545 0.967296 0.823184 22462 1 76 0.013684 111 0 5.54804e+07 0.0241075 182046 5.73562e+07 1.61612e+07 22478 2.74784e+07 0 0.152361 0.967296 0.796263 5.54804e+07 0.0152912 1.22128e+07 6.31061e+06 1.23828e+07 117 1.25021e+07 1.0396e+07 0.0144828 1.24074e+07 49.8099 0.00317395 0.973086 0 50.3454 GTEX-S4Z8-0526-SM-4AD4T 1 B1 2 pieces 11x8 & 10x8 mm; moderate macrovesicular steatosis; mild microvesicular steatosis 8.7 Liver Liver 0001114 127 1002 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991533 232306 0.980949 0.993078 0.864091 20890 1 76 0.00185828 150 0 7.54758e+07 0.0183532 433833 7.60019e+07 4.84161e+06 20903 3.76017e+07 0 0.116858 0.993078 0.85811 7.54758e+07 0.00236943 1.63966e+07 1.09875e+07 1.63944e+07 181 1.64273e+07 1.66254e+07 0.00211346 1.64697e+07 50.0645 0.00570819 0.994623 0 49.9966 GTEX-S4Z8-0626-SM-4AD6J 1 B1 6 pieces up to 9x1.7 mm; scattered medial calcification 6.8 Blood Vessel Artery - Aorta 0001496 128 1003 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991099 253798 0.972092 0.993154 0.821655 22467 1 76 0.00194354 155 0 7.30184e+07 0.0275859 161967 7.35218e+07 4.99773e+06 22490 3.63531e+07 0 0.150437 0.993154 0.81603 7.30184e+07 0.00264653 1.58407e+07 5.73944e+06 1.59193e+07 176 1.59289e+07 1.30856e+07 0.00229431 1.59736e+07 50.0701 0.00220298 0.995209 0 50.1237 GTEX-S4Z8-0726-SM-4GICB 1 B1 6 pieces up to 10x3.8 mm; all muscle no mucosa; Relabel as muscularis 8.4 Esophagus Esophagus - Muscularis 0004648 143 988 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.989535 410874 0.977063 0.992349 0.843949 22144 1 76 0.0021329 203 0 8.38388e+07 0.0226535 449417 8.44852e+07 8.52773e+06 22163 4.16833e+07 0 0.133114 0.992349 0.837492 8.38388e+07 0.0036265 1.82153e+07 7.57324e+06 1.83424e+07 214 1.83524e+07 1.53078e+07 0.00287758 1.84334e+07 50.1101 0.00531948 0.995164 0 50.1739 GTEX-S4Z8-0826-SM-4AD4J 1 B1 6 pieces up to 6x2 mm; all mucosa; relabel as mucosa. epithelium partially sloughed 7.9 Esophagus Esophagus - Mucosa 0006920 147 985 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.991812 276632 0.977697 0.993789 0.840245 23284 1 76 0.00184999 164 0 7.95165e+07 0.0220534 238364 8.00134e+07 5.37794e+06 23300 3.96062e+07 0 0.137452 0.993789 0.835026 7.95165e+07 0.00257189 1.75401e+07 7.19109e+06 1.76699e+07 197 1.76642e+07 1.56158e+07 0.00221022 1.76959e+07 50.045 0.00297905 0.995765 0 50.1843 GTEX-S4Z8-0926-SM-4AD6Q 1 B1 pieces 4x2 mm arteries with a 3x2 mm adherent adipose attachment; eccentric plaque 7.9 Blood Vessel Artery - Coronary 0001621 148 985 BP-23119 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.992174 298955 0.974551 0.993905 0.843251 20869 1 76 0.00187881 121 0 5.82427e+07 0.0251032 139006 5.85998e+07 3.63761e+06 20878 2.89995e+07 0 0.1313 0.993905 0.838112 5.82427e+07 0.00256736 1.25626e+07 4.41191e+06 1.25937e+07 138 1.25936e+07 1.16583e+07 0.00222248 1.2659e+07 50.1296 0.00237212 0.995636 0 50.0619 GTEX-S4Z8-1026-SM-2XUAL 1 B1 2 pieces 10x9 & 8x8 mm; 7.4 Heart Heart - Left Ventricle 0006566 151 983 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-1026-SM-3K2AI 1 B1 2 pieces 10x9 & 8x8 mm; 7.4 Heart Heart - Left Ventricle 0006566 151 983 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 TruSeq.v1 EXCLUDE 0.916729 152388 0.97109 0.922364 0.80683 23316 1 76 0.0138713 128 0 6.96544e+07 0.0282477 1.52494e+06 7.55172e+07 2.44436e+07 23340 3.45023e+07 0 0.16426 0.922364 0.744191 6.96544e+07 0.0146543 1.54052e+07 1.32905e+07 1.5481e+07 139 1.5541e+07 8.19466e+06 0.0142604 1.56813e+07 50.2246 0.0201933 0.927999 0 50.1227 GTEX-S4Z8-1026-SM-72D6N 1 B1 2 pieces 10x9 & 8x8 mm; 6.4 Heart Heart - Left Ventricle 0006566 151 983 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-6122 11/06/2014 TruSeq.v1 EXCLUDE 0.99431 312680 0.971084 0.994941 0.790614 25608 1 76 0.00245965 387 0 1.51595e+08 0.0281682 1.87141e+06 1.52366e+08 7.2149e+06 25666 7.55795e+07 0 0.18047 0.994941 0.786614 1.51595e+08 0.0030208 3.37111e+07 1.96656e+07 3.39595e+07 364 3.39002e+07 2.18835e+07 0.00274005 3.38503e+07 49.9632 0.0122823 0.995572 0 50.1835 GTEX-S4Z8-1026-SM-CM2RE 1 B1 2 pieces 10x9 & 8x8 mm; 6.4 Heart Heart - Left Ventricle 0006566 151 983 BP-54558 RNA Extraction from Paxgene-derived Lysate Plate Based 07/01/2014 LCSET-9115 07/13/2016 TruSeq.v1 EXCLUDE 0.993237 158996 0.971689 0.994367 0.811512 22331 1 76 0.00198507 136 0 6.05212e+07 0.027647 958077 6.0864e+07 3.55543e+06 22354 3.01428e+07 0 0.160177 0.994367 0.806941 6.05212e+07 0.00256887 1.34529e+07 6.52059e+06 1.35418e+07 158 1.35201e+07 8.73753e+06 0.00227664 1.35282e+07 50.0151 0.0157413 0.995497 0 50.1646 GTEX-S4Z8-1126-SM-4AD5C 1 B1 2 pieces 12x6 & 10x7; two cysts up to 2 mm. patchy fibrosis; interna; and external adipose ~40%. 7.2 Pancreas Pancreas 0001150 153 982 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.991518 330310 0.968546 0.993155 0.797955 23360 1 76 0.00200201 151 0 7.42188e+07 0.0311547 313668 7.47303e+07 4.83639e+06 23387 3.69659e+07 0 0.170591 0.993155 0.792493 7.42188e+07 0.00274215 1.60499e+07 7.49879e+06 1.61023e+07 174 1.60619e+07 1.25722e+07 0.00237147 1.62127e+07 50.2336 0.00419733 0.994793 0 50.0815 GTEX-S4Z8-1226-SM-4AD6W 2 B1 6 pieces up to 11x5 mm; deep oxyntic mucosa better preserved than surface; varies from piece to piece 7.8 Stomach Stomach 0000945 156 980 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989973 233174 0.973417 0.991816 0.827428 22468 1 76 0.00199422 199 0 7.46258e+07 0.0263935 913772 7.52416e+07 5.0858e+06 22489 3.71552e+07 0 0.145989 0.991816 0.820656 7.46258e+07 0.00271219 1.61644e+07 6.66102e+06 1.63154e+07 216 1.6246e+07 1.00585e+07 0.00235254 1.63601e+07 50.175 0.0121445 0.993658 0 50.2325 GTEX-S4Z8-1426-SM-4AD5G 1 B1 2 pieces 12x11 & 10x9 mm; nodular hyperplasia 7.3 Prostate Prostate 0002367 165 972 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.991478 347566 0.977496 0.993275 0.844992 21578 1 76 0.00207874 103 0 7.54302e+07 0.0221955 229956 7.59409e+07 4.90274e+06 21594 3.75595e+07 0 0.132504 0.993275 0.839309 7.54302e+07 0.00291152 1.72767e+07 2.00573e+07 1.74499e+07 122 1.74108e+07 2.17233e+07 0.00249438 1.7455e+07 50.0634 0.00302809 0.995072 0 50.2493 GTEX-S4Z8-1426-SM-72D7I 1 B1 2 pieces 12x11 & 10x9 mm; nodular hyperplasia 6.5 Prostate Prostate 0002367 165 972 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6122,LCSET-6436,LCSET-6557 12/20/2014 TruSeq.v1 EXCLUDE 0.992909 157166 0.97572 0.994382 0.808342 21915 1 76 0.002679 104 0 7.77428e+07 0.0240898 221428 7.81821e+07 4.2535e+06 21938 3.87235e+07 0 0.167378 0.994382 0.8038 7.77428e+07 0.00347955 1.77205e+07 1.6512e+07 1.78975e+07 122 1.78511e+07 2.06514e+07 0.00307868 1.78808e+07 50.0415 0.00283221 0.995854 0 50.2485 GTEX-S4Z8-1426-SM-CM2U3 1 B1 2 pieces 12x11 & 10x9 mm; nodular hyperplasia 6.5 Prostate Prostate 0002367 165 972 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-9115 07/13/2016 TruSeq.v1 EXCLUDE 0.993973 359231 0.976821 0.995283 0.824168 22153 1 76 0.00199637 120 0 8.93951e+07 0.0228513 327864 8.98188e+07 5.25119e+06 22176 4.45335e+07 0 0.152652 0.995283 0.820281 8.93951e+07 0.00268678 2.04141e+07 2.09635e+07 2.06039e+07 144 2.0554e+07 2.4541e+07 0.00234112 2.05773e+07 50.0284 0.00365028 0.996593 0 50.2313 GTEX-S4Z8-1526-SM-4AD5B 1 B1 6 pieces up to 11x4 mm; 8.2 Colon Colon - Transverse 0001157 173 965 BP-23051 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 EXCLUDE 0.991572 385105 0.981275 0.993992 0.861736 20859 1 76 0.00179903 195 0 7.57218e+07 0.0184832 1.10390e+06 7.61795e+07 4.94144e+06 20871 3.76905e+07 0 0.119539 0.993992 0.856559 7.57218e+07 0.0026501 1.67454e+07 9.28885e+06 1.66935e+07 219 1.67098e+07 1.2799e+07 0.00222353 1.68975e+07 50.2792 0.0144908 0.996411 0 49.9224 GTEX-S4Z8-1526-SM-731D2 1 B1 6 pieces up to 11x4 mm; 8 Colon Colon - Transverse 0001157 173 965 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-6123,LCSET-6511 12/19/2014 TruSeq.v1 EXCLUDE 0.992233 149684 0.981176 0.994029 0.852176 20279 1 76 0.00257997 151 0 7.02547e+07 0.0185563 857649 7.06767e+07 3.17717e+06 20290 3.49903e+07 0 0.129 0.994029 0.847088 7.02547e+07 0.00281934 1.5463e+07 7.02384e+06 1.56292e+07 183 1.5605e+07 1.19812e+07 0.00269944 1.55925e+07 49.9799 0.0121348 0.995825 0 50.2673 GTEX-S4Z8-1526-SM-D4P48 1 B1 6 pieces up to 11x4 mm; 8 Colon Colon - Transverse 0001157 173 965 BP-54602 RNA Extraction from Paxgene-derived Lysate Plate Based 07/02/2014 LCSET-9920 10/26/2016 TruSeq.v1 EXCLUDE 0.9927 413620 0.983919 0.993925 0.847337 22802 1 76 0.0020503 377 0 1.77433e+08 0.0158263 2.60998e+06 1.78518e+08 2.19366e+07 22831 8.84773e+07 0 0.136582 0.993925 0.842189 1.77433e+08 0.00311494 3.84357e+07 4.94938e+07 3.88315e+07 343 3.86375e+07 3.04569e+07 0.00258196 3.88032e+07 50.107 0.0146203 0.99515 0 50.2561 GTEX-S4Z8-1726-SM-2XU8V 0 B1 2 pieces 10x7 & 8x6 mm; good specimen 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 187 952 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-1726-SM-3K2AX 0 B1 2 pieces 10x7 & 8x6 mm; good specimen 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 187 952 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.969306 173549 0.971163 0.974954 0.816346 22209 1 76 0.0136986 115 0 5.77416e+07 0.0285848 352990 5.92249e+07 1.63591e+07 22228 2.86048e+07 0 0.154817 0.974954 0.7959 5.77416e+07 0.0148547 1.24958e+07 6.99520e+06 1.26699e+07 123 1.27591e+07 9.11441e+06 0.0142733 1.2716e+07 49.9153 0.00596016 0.980601 0 50.3458 GTEX-S4Z8-1826-SM-2XU9S 1 B1 2 pieces 12x8 & 9x7 mm; ~25% internal and external adipose 8.5 Muscle Muscle - Skeletal 0011907 189 950 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-1826-SM-3K2BH 1 B1 2 pieces 12x8 & 9x7 mm; ~25% internal and external adipose 8.5 Muscle Muscle - Skeletal 0011907 189 950 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.977719 257601 0.978565 0.983471 0.867826 19678 1 76 0.0136763 115 0 5.87299e+07 0.0212126 860510 5.97169e+07 1.95654e+07 19685 2.91038e+07 0 0.110739 0.983471 0.853482 5.87299e+07 0.0148994 1.26808e+07 8.77525e+06 1.28234e+07 125 1.29191e+07 1.1056e+07 0.0142843 1.28897e+07 49.9431 0.0144098 0.989222 0 50.2796 GTEX-S4Z8-1926-SM-2XU8Q 1 B1 2 pieces ~5x3 mm; clean, no expernal adipose; ~10% internal adipose 7.7 Nerve Nerve - Tibial 0001323 191 949 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-1926-SM-3K2AR 1 B1 2 pieces ~5x3 mm; clean, no expernal adipose; ~10% internal adipose 7.7 Nerve Nerve - Tibial 0001323 191 949 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.965809 183903 0.969556 0.971248 0.785732 23052 1 76 0.0138497 123 0 6.12298e+07 0.0301839 133850 6.30424e+07 1.96098e+07 23074 3.03427e+07 0 0.183824 0.971248 0.763141 6.12298e+07 0.014905 1.33739e+07 7.52861e+06 1.35237e+07 120 1.36307e+07 9.92016e+06 0.0143744 1.35884e+07 49.9223 0.00212317 0.976688 0 50.2784 GTEX-S4Z8-2026-SM-2XU8K 1 B1 2 pieces ~2.6 mm; moderate Monckeberg sclerosis; clean, no adipose 8.3 Blood Vessel Artery - Tibial 0007610 193 948 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S4Z8-2026-SM-3K2A9 1 B1 2 pieces ~2.6 mm; moderate Monckeberg sclerosis; clean, no adipose 8.3 Blood Vessel Artery - Tibial 0007610 193 948 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.97299 234351 0.972302 0.97868 0.835388 20571 1 76 0.0138514 111 0 5.23343e+07 0.0273618 130869 5.34743e+07 1.73019e+07 20579 2.59265e+07 0 0.136914 0.97868 0.817578 5.23343e+07 0.0152694 1.12341e+07 7.10627e+06 1.13835e+07 117 1.1473e+07 9.24912e+06 0.0145563 1.14288e+07 49.9036 0.00244732 0.98437 0 50.3304 GTEX-S4Z8-2126-SM-4AD5H 1 B1 2 pieces 12x7 & 9x8 mm; 5x1 mm capsule along one edge; reduced spermatogenesis 7.5 Testis Testis 0000473 195 946 BP-23077 RNA isolation_PAXgene Tissue miRNA 03/13/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991346 293914 0.954671 0.992972 0.752367 30094 1 76 0.00211746 202 0 8.3447e+07 0.0451023 1.24668e+06 8.40377e+07 5.49488e+06 30147 4.15734e+07 0 0.202304 0.992972 0.747079 8.3447e+07 0.00270852 1.82006e+07 8.73144e+06 1.82629e+07 214 1.83005e+07 1.20348e+07 0.00241251 1.82866e+07 49.9811 0.0148348 0.994597 0 50.0853 GTEX-S7PM-0006-SM-3NM8C C1 8.6 Blood Whole Blood 0013756 1127 BP-22532 RNA isolation_PAXgene Blood RNA (Manual) 02/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.975886 510274 0.971506 0.978791 0.7281 20368 1 76 0.00459206 116 0 8.78397e+07 0.0273813 139489 8.97431e+07 1.82202e+07 20389 4.36129e+07 0 0.243406 0.978791 0.712658 8.78397e+07 0.00629225 1.99803e+07 9.01601e+07 2.01979e+07 131 2.0275e+07 1.80309e+07 0.00543963 2.01622e+07 49.8605 0.00155431 0.981696 0 50.2708 GTEX-S7PM-0008-SM-3NM9Q C1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 1267 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991157 817901 0.973677 0.993548 0.847732 22271 1 76 0.00379659 290 0 1.1213e+08 0.025927 268829 1.12859e+08 2.21058e+07 22294 5.57806e+07 0 0.125944 0.993548 0.842263 1.1213e+08 0.00503767 2.49332e+07 1.5827e+07 2.50357e+07 307 2.51648e+07 2.34734e+07 0.00441564 2.50627e+07 49.8984 0.002382 0.99594 0 50.1026 GTEX-S7PM-0011-R5A-SM-3NM8G C1, A1 6.3 Brain Brain - Caudate (basal ganglia) 0001873 1167 BP-22978 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.98959 648674 0.963577 0.992343 0.827808 22378 1 76 0.00477827 367 0 9.42191e+07 0.0362695 1.11776e+07 9.49461e+07 1.96979e+07 22393 4.68566e+07 0 0.13577 0.992343 0.821469 9.42191e+07 0.0061609 2.0046e+07 4.88234e+07 2.07428e+07 356 2.02838e+07 5.45411e+06 0.00546766 2.07187e+07 50.5303 0.117725 0.995097 0 50.8541 GTEX-S7PM-0011-R6A-SM-3NM8F C1, A1 6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1167 BP-22978 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988981 674080 0.964743 0.992025 0.832545 22407 1 76 0.00479791 366 0 1.00035e+08 0.0351137 1.28986e+07 1.00839e+08 1.97508e+07 22421 4.97287e+07 0 0.132198 0.992025 0.825906 1.00035e+08 0.00629826 2.14195e+07 4.91241e+07 2.19799e+07 377 2.14472e+07 5.46077e+06 0.00554579 2.22451e+07 50.9131 0.127913 0.99507 0 50.6455 GTEX-S7PM-0126-SM-4AD6S 1 C1 6 pieces, ~7x3mm. Squamous mucosa is ~2-3% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1266 1177 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.989403 303641 0.974685 0.991464 0.829366 23745 1 76 0.0022861 180 0 8.04971e+07 0.0249844 462919 8.11902e+07 5.66421e+06 23773 4.0059e+07 0 0.145318 0.991464 0.822287 8.04971e+07 0.00308501 1.77964e+07 8.93022e+06 1.78232e+07 193 1.78641e+07 1.5194e+07 0.00268472 1.79183e+07 50.0758 0.00570166 0.993525 0 50.0377 GTEX-S7PM-0426-SM-3NM91 1 C1 2 aliquots, ~2.5mm d. Monckeberg's sclerosis noted; representative foci encircled 6.8 Blood Vessel Artery - Tibial 0007610 1276 1169 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990117 454742 0.969525 0.992566 0.814946 23925 1 76 0.00391189 276 0 1.1186e+08 0.0301133 295066 1.12698e+08 2.2587e+07 23960 5.56243e+07 0 0.154579 0.992566 0.808887 1.1186e+08 0.00525593 2.3941e+07 1.39076e+07 2.40403e+07 323 2.40695e+07 1.97986e+07 0.00458225 2.4177e+07 50.1113 0.0026182 0.995015 0 50.1034 GTEX-S7PM-0526-SM-3NM92 2 C1 2 aliquots, ~9x7mm. Minimal interstital fat. Unusually poorly preserved 7.1 Muscle Muscle - Skeletal 0011907 1278 1168 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991836 379993 0.979069 0.993977 0.868125 21273 1 76 0.00376115 199 0 1.06147e+08 0.0206505 755485 1.0679e+08 2.03208e+07 21287 5.28279e+07 0 0.110944 0.993977 0.862897 1.06147e+08 0.00495688 2.26918e+07 1.21115e+07 2.27096e+07 255 2.27176e+07 2.26336e+07 0.00435773 2.28986e+07 50.1984 0.00707447 0.996119 0 50.0196 GTEX-S7PM-0626-SM-4AD4Q 3 C1 2 aliquots, ~7.5x6mm. probable spermatogenesis, autolysis compromises assessment 5.9 Testis Testis 0000473 1300 1146 BP-23122 RNA isolation_PAXgene Tissue miRNA 03/14/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990065 440610 0.921367 0.991943 0.716078 33287 1 76 0.00218415 177 0 8.6326e+07 0.0782845 692059 8.70272e+07 5.58300e+06 33356 4.2983e+07 0 0.205289 0.991943 0.710308 8.6326e+07 0.00291652 1.76026e+07 1.27074e+07 1.76287e+07 174 1.76978e+07 1.39723e+07 0.00254964 1.76807e+07 49.9759 0.00795221 0.99382 0 50.037 GTEX-S7PM-0926-SM-3PYK3 3 C1 2 aliquots, ~8x6mm. Probable diffuse congestion, too autolyzed for definitive assessment Lung Lung 0008952 1312 1137 BP-23123 DNA Isolation from Tissue via QIAgen Spin Column 03/14/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R01C01 GTEX-S7PM-0926-SM-3PZ76 3 C1 2 aliquots, ~8x6mm. Probable diffuse congestion, too autolyzed for definitive assessment Lung Lung 0008952 1312 1137 BP-23123 DNA Isolation from Tissue via QIAgen Spin Column 03/14/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340005_R01C01 GTEX-S7PM-0926-SM-4X617 3 C1 2 aliquots, ~8x6mm. Probable diffuse congestion, too autolyzed for definitive assessment Lung Lung 0008952 1312 1137 BP-23123 DNA Isolation from Tissue via QIAgen Spin Column 03/14/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S7PM-0926-SM-5JK36 3 C1 2 aliquots, ~8x6mm. Probable diffuse congestion, too autolyzed for definitive assessment Lung Lung 0008952 1312 1137 BP-23123 DNA Isolation from Tissue via QIAgen Spin Column 03/14/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-S7PM-0926-SM-CLTGC 3 C1 2 aliquots, ~8x6mm. Probable diffuse congestion, too autolyzed for definitive assessment Lung Lung 0008952 1312 1137 BP-23123 DNA Isolation from Tissue via QIAgen Spin Column 03/14/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-S7SE-0004-SM-2XK2B C1 Blood Whole Blood 0013756 816 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R01C01 GTEX-S7SE-0004-SM-325A3 C1 Blood Whole Blood 0013756 816 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003131_R02C01 GTEX-S7SE-0004-SM-325HK C1 Blood Whole Blood 0013756 816 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R06C01 GTEX-S7SE-0004-SM-3USS8 C1 Blood Whole Blood 0013756 816 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-S7SE-0004-SM-5JK4E C1 Blood Whole Blood 0013756 816 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S7SE-0005-SM-2XCEA C1 9.5 Blood Whole Blood 0013756 816 BP-22532 RNA isolation_PAXgene Blood RNA (Manual) 02/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.940843 370477 0.970632 0.949209 0.750084 22037 1 76 0.00318917 132 0 8.48643e+07 0.0288561 196337 8.94053e+07 1.07266e+07 22062 4.1928e+07 0 0.220548 0.949209 0.711986 8.48643e+07 0.0137147 1.88327e+07 3.26009e+07 1.8964e+07 146 1.93098e+07 1.55477e+07 0.00840557 1.92102e+07 49.8706 0.00219603 0.957574 0 50.1737 GTEX-S7SE-0005-SM-2XV5X C1 9.5 Blood Whole Blood 0013756 816 BP-22532 RNA isolation_PAXgene Blood RNA (Manual) 02/16/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0008-SM-33HB1 C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 937 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.970172 438516 0.977747 0.972787 0.847365 22840 1 76 0.0020624 531 0 1.52505e+08 0.0218889 533344 1.56771e+08 1.24195e+07 22871 7.58364e+07 0 0.130382 0.972787 0.824306 1.52505e+08 0.00620346 3.40692e+07 1.4992e+07 3.43045e+07 468 3.43806e+07 3.21506e+07 0.00412736 3.43729e+07 49.9944 0.00340206 0.975402 0 50.1721 GTEX-S7SE-0011-R10A-SM-2XCDF C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.89861 217766 0.966226 0.904148 0.842577 24398 1 76 0.00278678 160 0 8.54385e+07 0.0331639 1.9308e+06 9.44962e+07 1.05655e+07 24423 4.23301e+07 0 0.123649 0.904148 0.761814 8.54385e+07 0.0125851 1.87266e+07 8.07229e+06 1.88342e+07 194 1.90071e+07 1.20135e+07 0.00765592 1.90276e+07 50.027 0.0204325 0.909687 0 50.1432 GTEX-S7SE-0011-R10A-SM-2XV6P C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R10A-SM-CYKW9 C1, A1 7.5 Brain Brain - Frontal Cortex (BA9) 0009834 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 RIP-Seq GTEX-S7SE-0011-R10a-SM-AHZNW C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 822 ChIP-Seq GTEX-S7SE-0011-R11A-SM-2XCDD C1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.492309 61969 0.95217 0.500279 0.770826 21321 1 76 0.00305 100 0 3.26527e+07 0.0472881 432394 6.52691e+07 1.02372e+07 21331 1.59762e+07 0 0.181344 0.500279 0.385628 3.26527e+07 0.0136129 6.91466e+06 4.27377e+06 7.05644e+06 109 7.28308e+06 4.33519e+06 0.00824729 7.1725e+06 49.6175 0.00662479 0.508249 0 50.5074 GTEX-S7SE-0011-R11A-SM-2XV71 C1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R1A-SM-2XCDE C1, A1 6.7 Brain Brain - Hippocampus 0001954 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.797591 160789 0.967196 0.803886 0.84536 23082 1 76 0.00321448 137 0 6.78064e+07 0.0325722 5.23533e+06 8.43483e+07 1.05335e+07 23098 3.35386e+07 0 0.121836 0.803886 0.679573 6.78064e+07 0.0134103 1.47902e+07 1.13545e+07 1.51155e+07 178 1.51575e+07 5.40881e+06 0.00827249 1.51943e+07 50.0607 0.062068 0.81018 0 50.544 GTEX-S7SE-0011-R1A-SM-2XV6O C1, A1 6.7 Brain Brain - Hippocampus 0001954 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R2A-SM-2XCDC C1, A1 6.2 Brain Brain - Substantia nigra 0002038 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.897183 122415 0.967854 0.902994 0.846108 22987 1 76 0.00298507 141 0 6.62043e+07 0.0318391 3.19423e+06 7.33164e+07 7.91565e+06 23005 3.27842e+07 0 0.121745 0.902994 0.764031 6.62043e+07 0.0129369 1.45773e+07 5.77242e+06 1.49176e+07 172 1.49107e+07 7.91659e+06 0.00792895 1.49651e+07 50.091 0.0435678 0.908805 0 50.5768 GTEX-S7SE-0011-R2A-SM-2XV69 C1, A1 6.2 Brain Brain - Substantia nigra 0002038 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R4A-SM-2XCDB C1, A1 7.7 Brain Brain - Amygdala 0001876 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.921442 229993 0.966493 0.92974 0.849271 23844 1 76 0.0029768 160 0 7.4679e+07 0.0330963 4.07059e+06 8.03225e+07 9.0759e+06 23865 3.69073e+07 0 0.117223 0.92974 0.789601 7.4679e+07 0.0128711 1.63618e+07 1.10334e+07 1.64479e+07 186 1.66485e+07 8.46664e+06 0.00787978 1.67527e+07 50.156 0.050678 0.938037 0 50.1311 GTEX-S7SE-0011-R4A-SM-2XV6H C1, A1 7.7 Brain Brain - Amygdala 0001876 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R5A-SM-2XCDA C1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.648619 92893 0.963631 0.662304 0.831693 21779 1 76 0.00310364 106 0 3.27295e+07 0.0359025 1.46406e+06 4.94177e+07 6.58501e+06 21786 1.59715e+07 0 0.131938 0.662304 0.550833 3.27295e+07 0.0141829 7.02119e+06 4.95069e+06 7.1397e+06 115 7.43954e+06 4.09877e+06 0.00852879 7.36061e+06 49.7334 0.0296263 0.675989 0 50.4185 GTEX-S7SE-0011-R5A-SM-2XV6C C1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R6A-SM-2XCD9 C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.775976 159954 0.963877 0.783231 0.838199 23697 1 76 0.00300446 121 0 5.77281e+07 0.0357409 2.71408e+06 7.37051e+07 9.11073e+06 23712 2.85009e+07 0 0.125678 0.783231 0.656503 5.77281e+07 0.0131631 1.25898e+07 7.12172e+06 1.27306e+07 145 1.28928e+07 7.14119e+06 0.00803675 1.29125e+07 50.0382 0.0368235 0.790485 0 50.2779 GTEX-S7SE-0011-R6A-SM-2XV62 C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R7A-SM-2XCDI C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.675618 191019 0.960306 0.67999 0.849978 22476 1 76 0.00301065 116 0 5.60403e+07 0.0393409 2.92199e+06 8.24134e+07 9.75383e+06 22489 2.77439e+07 0 0.110328 0.67999 0.577976 5.60403e+07 0.0128846 1.2171e+07 1.03772e+07 1.23852e+07 140 1.24513e+07 6.35006e+06 0.00791588 1.24304e+07 49.9581 0.0354552 0.684361 0 50.4363 GTEX-S7SE-0011-R7A-SM-2XV6D C1, A1 6.1 Brain Brain - Putamen (basal ganglia) 0001874 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0011-R8A-SM-2XCDG C1, A1 7.5 Brain Brain - Hypothalamus 0001898 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.861581 116414 0.965491 0.87009 0.830365 23662 1 76 0.00306227 119 0 5.89867e+07 0.034094 2.5797e+06 6.77938e+07 8.36581e+06 23681 2.9121e+07 0 0.135125 0.87009 0.722492 5.89867e+07 0.0134677 1.29684e+07 6.94457e+06 1.2995e+07 144 1.31842e+07 6.9361e+06 0.00821408 1.3301e+07 50.2206 0.0380521 0.878598 0 50.0512 GTEX-S7SE-0011-R8A-SM-2XV6X C1, A1 7.5 Brain Brain - Hypothalamus 0001898 822 BP-22979 RNA isolation_PAXgene Tissue miRNA 03/08/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0126-SM-2XCD5 1 C1 6 pieces, 6xx3mm. Squamous mucosa is ~2-3% of thickness. 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 936 1233 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.973275 169966 0.971183 0.978367 0.813636 24168 1 76 0.00279543 196 0 9.00442e+07 0.0284232 446212 9.20352e+07 9.49378e+06 24201 4.46706e+07 0 0.157547 0.978367 0.796035 9.00442e+07 0.0119084 1.94225e+07 1.11573e+07 1.94852e+07 183 1.96384e+07 1.56368e+07 0.0073282 1.9704e+07 50.0834 0.00484827 0.983458 0 50.0806 GTEX-S7SE-0126-SM-2XV4Z 1 C1 6 pieces, 6xx3mm. Squamous mucosa is ~2-3% of thickness. 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 936 1233 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0226-SM-2XCD4 1 C1 2 aliquots, ~8x6mm. 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 940 1230 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.86935 181437 0.96615 0.874133 0.78406 23259 1 76 0.00292648 132 0 6.9692e+07 0.033572 659693 7.9727e+07 1.06059e+07 23284 3.45408e+07 0 0.18209 0.874133 0.685373 6.9692e+07 0.0122172 1.51658e+07 9.65149e+06 1.52698e+07 147 1.5377e+07 1.02331e+07 0.00754644 1.54085e+07 50.0511 0.0082744 0.878917 0 50.1708 GTEX-S7SE-0326-SM-4AT5Q 2 C1 2 aliquots, ~8x5mm. Spermatogenesis is noted 6.4 Testis Testis 0000473 946 1224 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989885 302507 0.931107 0.991619 0.734429 32083 1 76 0.00207145 139 0 6.73032e+07 0.0685674 496970 6.78721e+07 5.74392e+06 32137 3.35113e+07 0 0.196678 0.991619 0.728273 6.73032e+07 0.00273846 1.40721e+07 1.01297e+07 1.4121e+07 139 1.41721e+07 1.11781e+07 0.00240437 1.413e+07 49.9256 0.00732216 0.993352 0 50.0866 GTEX-S7SE-0526-SM-2XCD8 1 C1 2 aliquoqts, ~2.5mm. Good clean speimens 7 Blood Vessel Artery - Tibial 0007610 968 1205 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.869691 89309 0.973185 0.876165 0.810965 21510 1 76 0.00284796 130 0 5.88066e+07 0.0264451 222366 6.71182e+07 7.98423e+06 21522 2.90921e+07 0 0.16222 0.876165 0.710539 5.88066e+07 0.013001 1.25453e+07 5.07847e+06 1.26376e+07 134 1.27817e+07 1.07809e+07 0.00788695 1.28033e+07 50.0421 0.00331305 0.88264 0 50.1834 GTEX-S7SE-0526-SM-2XV4N 1 C1 2 aliquoqts, ~2.5mm. Good clean speimens 7 Blood Vessel Artery - Tibial 0007610 968 1205 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0726-SM-2XCD7 1 C1 2 aliquots, ~8x6mm 7.1 Thyroid Thyroid 0002046 1057 1118 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.815061 135186 0.963306 0.821158 0.766749 24013 1 76 0.00289713 124 0 5.82306e+07 0.0363543 211628 7.09128e+07 7.78792e+06 24041 2.88107e+07 0 0.196557 0.821158 0.629622 5.82306e+07 0.0130253 1.25889e+07 7.00518e+06 1.26923e+07 129 1.28636e+07 9.87026e+06 0.0079236 1.2822e+07 49.9188 0.00298434 0.827254 0 50.2046 GTEX-S7SE-0726-SM-2XV5T 1 C1 2 aliquots, ~8x6mm 7.1 Thyroid Thyroid 0002046 1057 1118 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0826-SM-4AT4D 1 C1 2 aliquots, ~8x8mm. No ductal elements noted. 5.9 Breast Breast - Mammary Tissue 0008367 1059 1116 BP-23281 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.985837 204871 0.97413 0.987665 0.805604 22530 1 76 0.00207357 142 0 6.58006e+07 0.0255342 280885 6.66224e+07 5.72666e+06 22553 3.27434e+07 0 0.168526 0.987665 0.795667 6.58006e+07 0.00281879 1.44586e+07 8.45139e+06 1.4481e+07 160 1.45031e+07 1.08966e+07 0.00244549 1.45578e+07 50.0943 0.00421607 0.989492 0 50.0388 GTEX-S7SE-0926-SM-2XCD6 2 C1 2 aliquots, 10x 7mm, foci of chronic inflammation--areas of emphysematous damage 6.8 Lung Lung 0008952 1061 1115 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.855132 133156 0.961947 0.861922 0.733582 23913 1 76 0.0035345 138 0 5.17659e+07 0.0365918 92972 6.00587e+07 7.4842e+06 23934 2.55378e+07 0 0.228365 0.861922 0.632291 5.17659e+07 0.0136684 1.12529e+07 8.06274e+06 1.13665e+07 151 1.15302e+07 7.81273e+06 0.00856154 1.14732e+07 49.8762 0.00154802 0.868712 0 50.2511 GTEX-S7SE-0926-SM-2XV63 2 C1 2 aliquots, 10x 7mm, foci of chronic inflammation--areas of emphysematous damage 6.8 Lung Lung 0008952 1061 1115 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SE-0926-SM-CYKVJ 2 C1 2 aliquots, 10x 7mm, foci of chronic inflammation--areas of emphysematous damage 6.8 Lung Lung 0008952 1061 1115 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 RIP-Seq GTEX-S7SE-2526-SM-2XCDL 2 C1 4 pieces, ~4x3mm 6.9 Brain Brain - Cerebellum 0002037 1098 1089 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.963495 716193 0.931874 0.970903 0.706853 24883 1 76 0.00313162 141 0 8.94061e+07 0.0678 1.18489e+06 9.20855e+07 1.05397e+07 24923 4.4211e+07 0 0.225021 0.970903 0.686285 8.94061e+07 0.0135361 1.87922e+07 2.86013e+07 1.90924e+07 181 1.93293e+07 1.0172e+07 0.00829416 1.91924e+07 49.8222 0.0128673 0.97831 0 50.3962 GTEX-S7SE-2526-SM-2XV6R 2 C1 4 pieces, ~4x3mm 6.9 Brain Brain - Cerebellum 0002037 1098 1089 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0001-SM-2XV74 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -9 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0001-SM-3K2BE B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -9 BP-23551 RNA isolation_Trizol Manual (Cell Pellet) 03/29/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.964175 1.03392e+06 0.961 0.968624 0.749471 23088 1 76 0.0141031 136 0 9.43497e+07 0.0384429 1.04105e+06 9.74059e+07 3.10744e+07 23123 4.67934e+07 0 0.211529 0.968624 0.725956 9.43497e+07 0.0144778 2.06826e+07 2.42315e+07 2.09815e+07 137 2.11609e+07 1.96465e+07 0.0142895 2.09123e+07 49.7046 0.0106877 0.973073 0 50.3588 GTEX-S7SF-0003-SM-2VCU4 B1 Blood Whole Blood 0013756 -6 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array OMNI 6762330002_R03C01 GTEX-S7SF-0003-SM-2XK2H B1 Blood Whole Blood 0013756 -6 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311034_R02C01 GTEX-S7SF-0003-SM-3USSM B1 Blood Whole Blood 0013756 -6 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-S7SF-0003-SM-5JK43 B1 Blood Whole Blood 0013756 -6 BP-22464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/14/2012 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S7SF-0006-SM-2XUAD B1 9.1 Blood Whole Blood 0013756 -7 BP-22532 RNA isolation_PAXgene Blood RNA (Manual) 02/16/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0006-SM-3K2B6 B1 9.1 Blood Whole Blood 0013756 -7 BP-22532 RNA isolation_PAXgene Blood RNA (Manual) 02/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.938955 448592 0.954401 0.946203 0.787495 19473 1 76 0.0141907 107 0 5.49219e+07 0.045181 203206 5.80445e+07 2.05705e+07 19482 2.71515e+07 0 0.166906 0.946203 0.74513 5.49219e+07 0.0164168 1.18885e+07 3.10865e+07 1.20024e+07 117 1.21703e+07 1.04591e+07 0.0152952 1.21222e+07 49.9008 0.00350087 0.953451 0 50.2385 GTEX-S7SF-0008-SM-3NM8T B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 345 BP-25393 RNA isolation_Trizol Manual (Cell Pellet) 05/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.992794 557745 0.977194 0.994708 0.856039 22298 1 76 0.0035887 296 0 1.33859e+08 0.0224433 474708 1.34571e+08 2.64865e+07 22325 6.66545e+07 0 0.121154 0.994708 0.851509 1.33859e+08 0.00453732 2.97969e+07 1.68403e+07 2.99279e+07 326 3.00255e+07 2.86566e+07 0.0040621 2.994e+07 49.9287 0.00352757 0.996623 0 50.1097 GTEX-S7SF-0226-SM-2XUAJ 0 B1 2 pieces 10x6 mm; 10% peripheral fibroadipose 6.9 Thyroid Thyroid 0002046 273 833 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0226-SM-3K2BI 0 B1 2 pieces 10x6 mm; 10% peripheral fibroadipose 6.9 Thyroid Thyroid 0002046 273 833 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.343312 55483 0.962149 0.346387 0.756271 20774 1 76 0.0137238 101 0 2.22081e+07 0.0374255 113588 6.41135e+07 2.36591e+07 20785 1.08191e+07 0 0.205878 0.346387 0.261963 2.22081e+07 0.0184074 4.7445e+06 3.61641e+06 4.87189e+06 108 4.93537e+06 3.24732e+06 0.0160448 4.86026e+06 49.6166 0.00177167 0.349463 0 50.6624 GTEX-S7SF-0226-SM-5SI7H 0 B1 2 pieces 10x6 mm; 10% peripheral fibroadipose 6.9 Thyroid Thyroid 0002046 273 833 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.991499 217828 0.963837 0.993728 0.764782 23617 1 76 0.00202485 138 0 6.84056e+07 0.0359105 341582 6.88373e+07 5.82168e+06 23647 3.40526e+07 0 0.199055 0.993728 0.759985 6.84056e+07 0.00320507 1.48831e+07 7.88704e+06 1.50011e+07 156 1.49849e+07 1.06323e+07 0.00261364 1.50461e+07 50.1019 0.00496216 0.995956 0 50.1974 GTEX-S7SF-0426-SM-2XUAV 1 B1 2 pieces 11x87 10x9 mm; Bronchopneumonia in ~40% and interstitial fibrosis in ~60% 7 Lung Lung 0008952 282 823 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0426-SM-3K2B7 1 B1 2 pieces 11x87 10x9 mm; Bronchopneumonia in ~40% and interstitial fibrosis in ~60% 7 Lung Lung 0008952 282 823 BP-23146 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.965939 227963 0.974152 0.971822 0.834461 22965 1 76 0.0140244 111 0 6.14919e+07 0.0255893 153175 6.32748e+07 2.0446e+07 22980 3.04628e+07 0 0.139691 0.971822 0.810948 6.14919e+07 0.0154397 1.34653e+07 8.41564e+06 1.36382e+07 120 1.37456e+07 1.09926e+07 0.0147277 1.37083e+07 49.932 0.00242079 0.977705 0 50.3189 GTEX-S7SF-0526-SM-2XUAI 1 B1 2 pieces 13x7 & 10x10 mm; no adipose 8.7 Heart Heart - Left Ventricle 0006566 287 817 BP-23149 RNA isolation_PAXgene Tissue miRNA 03/15/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-0526-SM-3K2BC 1 B1 2 pieces 13x7 & 10x10 mm; no adipose 8.7 Heart Heart - Left Ventricle 0006566 287 817 BP-23149 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.721879 184154 0.978928 0.726807 0.857454 19031 1 76 0.0138793 111 0 3.49649e+07 0.0208375 945659 4.81076e+07 1.92866e+07 19036 1.72356e+07 0 0.121474 0.726807 0.623204 3.49649e+07 0.0170234 7.66062e+06 5.00912e+06 7.80711e+06 128 7.85942e+06 5.82177e+06 0.0154407 7.80805e+06 49.836 0.0196572 0.731735 0 50.4736 GTEX-S7SF-0626-SM-4AD4V 1 B1 6 pieces up to 10x4.8 mm; 3 have antral (not body) mucosa with mild chronic gastritis; 3 are only muscularis 7.6 Stomach Stomach 0000945 292 812 BP-23149 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.99194 224382 0.974168 0.993506 0.824282 23857 1 76 0.00210979 162 0 7.14898e+07 0.025265 626043 7.19572e+07 4.66193e+06 23875 3.56105e+07 0 0.149885 0.993506 0.818929 7.14898e+07 0.00275671 1.56778e+07 6.55682e+06 1.57237e+07 171 1.57294e+07 1.2762e+07 0.00243274 1.57779e+07 50.0769 0.00870022 0.995071 0 50.0731 GTEX-S7SF-0826-SM-4AD4W 0 B1 2 pieces 8x7 mm; all myometrium, no endometrium 7.9 Uterus Uterus 0000995 298 804 BP-23149 RNA isolation_PAXgene Tissue miRNA 03/15/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991673 269060 0.970482 0.993216 0.784211 23038 1 76 0.00199165 131 0 6.24078e+07 0.0292137 115908 6.28341e+07 3.8202e+06 23058 3.10789e+07 0 0.186272 0.993216 0.77889 6.24078e+07 0.00262409 1.36819e+07 5.62289e+06 1.37047e+07 141 1.37149e+07 1.11058e+07 0.00230737 1.37675e+07 50.0957 0.00184467 0.994758 0 50.0415 GTEX-S7SF-0926-SM-4AD4M 0 B1 6 pieces up to 8x3.5 mm; all have mucosa and abundant submucosal glands 8.1 Esophagus Esophagus - Mucosa 0006920 308 793 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.991489 295003 0.975393 0.993256 0.824653 22474 1 76 0.00197815 148 0 6.95003e+07 0.0241899 291788 6.99722e+07 4.26383e+06 22492 3.46125e+07 0 0.15074 0.993256 0.819091 6.95003e+07 0.00270016 1.55681e+07 7.76862e+06 1.5658e+07 160 1.56844e+07 1.369e+07 0.00233851 1.56615e+07 49.9636 0.00417005 0.995022 0 50.144 GTEX-S7SF-1026-SM-4AD4I 1 B1 6 pieces up to 7x4 mm; 1 has a 2.8 mm circular focus of fibrotic submucosa 7.1 Esophagus Esophagus - Muscularis 0004648 310 790 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.990653 254951 0.975795 0.992539 0.84116 21901 1 76 0.00197105 144 0 6.48611e+07 0.0239336 852294 6.53487e+07 3.94163e+06 21916 3.22953e+07 0 0.134635 0.992539 0.834884 6.48611e+07 0.00272921 1.41042e+07 5.40412e+06 1.42066e+07 162 1.41937e+07 1.11546e+07 0.00234941 1.42338e+07 50.0705 0.0130423 0.994426 0 50.1808 GTEX-S7SF-1326-SM-4AD4P 0 B1 2 pieces 10x9 & 10x8 mm; atrophic, no ova, old corpora 6 Ovary Ovary 0000992 321 776 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3098 05/14/2013 TruSeq.v1 RNASEQ 0.988145 287436 0.965326 0.989972 0.740229 23376 1 76 0.00207258 160 0 7.82934e+07 0.034422 296938 7.90865e+07 5.20978e+06 23421 3.89634e+07 0 0.225098 0.989972 0.732806 7.82934e+07 0.00279909 1.72146e+07 7.47152e+06 1.72664e+07 171 1.72875e+07 1.27239e+07 0.00243516 1.73338e+07 50.0668 0.0037546 0.991799 0 50.0751 GTEX-S7SF-1426-SM-4AT5A 0 B1 6 pieces up to 8x4 mm; well preserved mucosa on all pieces 7.8 Vagina Vagina 0000996 324 773 BP-23169 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988849 288563 0.974209 0.990719 0.79544 22705 1 76 0.00193849 158 0 7.46523e+07 0.0255932 213134 7.53516e+07 6.49806e+06 22727 3.71579e+07 0 0.178769 0.990719 0.788058 7.46523e+07 0.00271685 1.67058e+07 1.04255e+07 1.67282e+07 172 1.67454e+07 1.34622e+07 0.00232693 1.68302e+07 50.1263 0.00282853 0.992589 0 50.0335 GTEX-S7SF-1626-SM-2XU9K 1 B1 6 pieces up to 9x4.5 mm; subcutaneous fat is up to 2.5 mm thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 339 754 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-1626-SM-3K2AY 1 B1 6 pieces up to 9x4.5 mm; subcutaneous fat is up to 2.5 mm thick 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 339 754 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.965651 189343 0.9719 0.971103 0.816017 22183 1 76 0.0141235 142 0 6.38086e+07 0.0278097 498508 6.57073e+07 2.14623e+07 22197 3.16257e+07 0 0.155883 0.971103 0.792437 6.38086e+07 0.015363 1.38843e+07 1.08543e+07 1.40279e+07 122 1.4126e+07 1.08809e+07 0.0147398 1.41225e+07 49.9938 0.0075868 0.976555 0 50.2573 GTEX-S7SF-1826-SM-3K2AD 1 B1 2 pieces 16x14 & 14x12 mm; aliquots are too large and have central unfixed areas. Each contains 1.5 mm blood vessels 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 343 749 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.954297 221759 0.974572 0.959973 0.816434 21835 1 76 0.0138972 122 0 6.92928e+07 0.0251095 524714 7.2182e+07 2.45847e+07 21858 3.43227e+07 0 0.158138 0.959973 0.783755 6.92928e+07 0.0154562 1.51028e+07 1.01824e+07 1.52741e+07 132 1.53966e+07 1.04371e+07 0.0146721 1.53516e+07 49.9269 0.00726932 0.96565 0 50.282 GTEX-S7SF-1926-SM-4AT5B 1 B1 6 pieces up to 6x4 mm; good mucosal morphology; full thickness wall 7.5 Colon Colon - Transverse 0001157 349 743 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990338 272915 0.972484 0.992327 0.801395 24117 1 76 0.00221006 209 0 8.43432e+07 0.026766 1.1592e+06 8.49954e+07 7.63609e+06 24143 4.1969e+07 0 0.171089 0.992327 0.795246 8.43432e+07 0.00289664 1.87008e+07 9.88236e+06 1.88077e+07 245 1.88019e+07 1.23343e+07 0.00255266 1.88639e+07 50.0824 0.0136383 0.994315 0 50.1425 GTEX-S7SF-2026-SM-2XU9J 0 B1 2 pieces 12x6 & 7x7 mm; minimal adipose 8.2 Muscle Muscle - Skeletal 0011907 355 737 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-2026-SM-3K2AS 0 B1 2 pieces 12x6 & 7x7 mm; minimal adipose 8.2 Muscle Muscle - Skeletal 0011907 355 737 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.977213 187830 0.978992 0.982868 0.865173 19058 1 76 0.0137846 130 0 6.84778e+07 0.0207466 932501 6.96714e+07 2.35245e+07 19070 3.39532e+07 0 0.113819 0.982868 0.850351 6.84778e+07 0.0155815 1.5139e+07 1.1037e+07 1.53269e+07 132 1.54428e+07 1.28765e+07 0.0146779 1.53788e+07 49.8961 0.0133843 0.988523 0 50.3084 GTEX-S7SF-2126-SM-3K2B2 0 B1 2 pieces 6x4 & 3x3 mm; <10% adipose in larger 6.6 Nerve Nerve - Tibial 0001323 356 736 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.956906 204997 0.965808 0.963015 0.782652 23556 1 76 0.0139359 131 0 7.19575e+07 0.0339696 472057 7.47211e+07 2.41196e+07 23579 3.56287e+07 0 0.183156 0.963015 0.753705 7.19575e+07 0.0154156 1.56694e+07 1.00962e+07 1.58377e+07 133 1.59574e+07 1.06961e+07 0.0146711 1.59731e+07 50.0247 0.00631759 0.969124 0 50.2671 GTEX-S7SF-2226-SM-2XU93 0 B1 2 pieces: 3x2 & 1.8x1.7 mm; larger contains 2 normal arteries, 1 small vein & 40% surrounding fibrous stroma; Smaller artery has 20% stroma 7.9 Blood Vessel Artery - Tibial 0007610 358 734 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 GTEx_AffyBatch8_May12 05/23/2012 Affymetrix Expression EXCLUDE GTEX-S7SF-2226-SM-3K2BG 0 B1 2 pieces: 3x2 & 1.8x1.7 mm; larger contains 2 normal arteries, 1 small vein & 40% surrounding fibrous stroma; Smaller artery has 20% stroma 7.9 Blood Vessel Artery - Tibial 0007610 358 734 BP-23171 RNA isolation_PAXgene Tissue miRNA 03/16/2012 LCSET-2147 09/27/2012 TruSeq.v1 EXCLUDE 0.963856 189831 0.9709 0.96887 0.839988 21428 1 76 0.0137883 123 0 7.36441e+07 0.0287628 462526 7.60103e+07 2.52595e+07 21446 3.65217e+07 0 0.130913 0.96887 0.813839 7.36441e+07 0.0145848 1.56155e+07 9.20483e+06 1.58397e+07 134 1.59241e+07 1.29826e+07 0.0141845 1.5869e+07 49.9133 0.00608504 0.973883 0 50.3563 GTEX-S95S-0002-SM-3NM8K B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -142 BP-25565 RNA isolation_Trizol Manual (Cell Pellet) 05/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991285 1.24801e+06 0.962189 0.993432 0.807476 22449 1 76 0.00394763 220 0 1.08316e+08 0.0370647 716978 1.09032e+08 2.07464e+07 22485 5.38676e+07 0 0.154713 0.993432 0.802173 1.08316e+08 0.00501391 2.39312e+07 2.41111e+07 2.39966e+07 227 2.40947e+07 2.49274e+07 0.00447962 2.40709e+07 49.9754 0.00657585 0.995579 0 50.0682 GTEX-S95S-0004-SM-325A4 B1 Blood Whole Blood 0013756 -142 BP-22575 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003078_R02C01 GTEX-S95S-0004-SM-325HJ B1 Blood Whole Blood 0013756 -142 BP-22575 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R04C02 GTEX-S95S-0004-SM-4X613 B1 Blood Whole Blood 0013756 -142 BP-22575 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-S95S-0004-SM-5JK3U B1 Blood Whole Blood 0013756 -142 BP-22575 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-S95S-0005-SM-2XCEC B1 8.8 Blood Whole Blood 0013756 -142 BP-22576 RNA isolation_PAXgene Blood RNA (Manual) 02/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.732421 494879 0.959015 0.745209 0.802086 19476 1 76 0.00324305 104 0 5.77721e+07 0.0403922 230091 7.75246e+07 1.1333e+07 19485 2.82916e+07 0 0.156929 0.745209 0.597722 5.77721e+07 0.0146195 1.24833e+07 4.10061e+07 1.25733e+07 117 1.30432e+07 1.18024e+07 0.00883364 1.2957e+07 49.8342 0.00296797 0.757998 0 50.1795 GTEX-S95S-0005-SM-2XV5N B1 8.8 Blood Whole Blood 0013756 -142 BP-22576 RNA isolation_PAXgene Blood RNA (Manual) 02/21/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S95S-0008-SM-4AT5M B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 277 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991104 484748 0.969578 0.993301 0.832588 21186 1 76 0.00174306 194 0 7.42635e+07 0.0300178 282238 7.47643e+07 6.74674e+06 21209 3.69635e+07 0 0.136991 0.993301 0.82701 7.42635e+07 0.00239599 1.64682e+07 1.03877e+07 1.65284e+07 174 1.65998e+07 1.59095e+07 0.0020688 1.65589e+07 49.9383 0.00377503 0.995499 0 50.0911 GTEX-S95S-0226-SM-4B656 0 B1 6 pieces, ~9x1.5mm 6.4 Blood Vessel Artery - Aorta 0001496 236 1041 BP-23279 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984996 348940 0.970433 0.988231 0.84576 21223 1 76 0.00222861 138 0 6.42802e+07 0.029248 230114 6.50458e+07 6.00082e+06 21235 3.19477e+07 0 0.124672 0.988231 0.835806 6.42802e+07 0.00335696 1.38372e+07 8.07985e+06 1.39316e+07 156 1.39498e+07 1.17278e+07 0.00279094 1.40209e+07 50.1271 0.00353772 0.991465 0 50.17 GTEX-S95S-0326-SM-4B66U 1 B1 6 pieces, ~7x3mm 7.7 Esophagus Esophagus - Muscularis 0004648 240 1038 BP-23279 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990245 480258 0.976061 0.992867 0.84358 23199 1 76 0.00212168 281 0 1.00801e+08 0.0236868 1.18494e+06 1.01525e+08 9.77266e+06 23220 5.01592e+07 0 0.132481 0.992867 0.837563 1.00801e+08 0.00295868 2.18722e+07 1.03674e+07 2.20225e+07 324 2.20176e+07 1.70031e+07 0.00253908 2.21215e+07 50.1177 0.0116714 0.995489 0 50.1711 GTEX-S95S-0426-SM-4B64I 1 B1 6 pieces, ~6x3mm. Squmous mucosa well-preserved, ~8-10% of thickness 8.5 Esophagus Esophagus - Mucosa 0006920 242 1037 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987797 486576 0.974536 0.9913 0.823575 23045 1 76 0.00220616 210 0 8.84474e+07 0.0251288 787146 8.92237e+07 8.8077e+06 23064 4.39685e+07 0 0.150961 0.9913 0.816409 8.84474e+07 0.00317597 1.97186e+07 1.17907e+07 1.98638e+07 230 1.99316e+07 1.65854e+07 0.00268935 1.99494e+07 50.0224 0.00882216 0.994803 0 50.1834 GTEX-S95S-0626-SM-EZ6L8 2 B1 4 pieces, ~6x4mm, no visible urothelium; LDCC NOTE: 2 are ~50% fat, encircled 5.8 Bladder Bladder 0001255 248 1033 BP-23281 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990017 213209 0.970432 0.991299 0.806308 23770 1 76 0.00239734 276 0 9.35248e+07 0.0292985 995617 9.43457e+07 6.26496e+06 23798 4.66151e+07 0 0.164124 0.991299 0.799292 9.35248e+07 0.00330192 2.02072e+07 7.95149e+06 2.03382e+07 293 2.02823e+07 1.48254e+07 0.00284905 2.03692e+07 50.1068 0.0105529 0.992581 0 50.1616 GTEX-S95S-0726-SM-4B64H 1 B1 2 aliquots ~8x6mm. LDACC NOTE: 2 foci of low grade ductal dyplasia, ~0.3mm in dimensions noted in one aliquot, ensquared. Good islets, representative ones encircled. Overall excellent preservation with minimal fat. 6.1 Pancreas Pancreas 0001150 254 1028 BP-23281 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.982333 1.06683e+06 0.936986 0.985869 0.795338 21100 1 76 0.00231483 106 0 7.18784e+07 0.0628057 386584 7.29087e+07 6.8861e+06 21112 3.5714e+07 0 0.141648 0.985869 0.784099 7.18784e+07 0.00347647 1.57014e+07 4.70719e+07 1.59659e+07 119 1.5983e+07 1.78615e+07 0.00289357 1.5962e+07 49.9671 0.0053023 0.989404 0 50.4175 GTEX-S95S-0826-SM-4B64N 1 B1 6 pieces, ~10x2mm. Mucosa extremely well-preserved, up to 50% of thickness in well-oriented pieces. 6.9 Stomach Stomach 0000945 258 1025 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984322 464258 0.975905 0.987883 0.843661 22725 1 76 0.00227271 329 0 8.56835e+07 0.0236137 1.76672e+06 8.67344e+07 8.43575e+06 22747 4.25644e+07 0 0.132243 0.987883 0.833439 8.56835e+07 0.00327427 1.94419e+07 5.70254e+07 1.95398e+07 273 1.96218e+07 1.69916e+07 0.00277168 1.96488e+07 50.0343 0.0203693 0.991444 0 50.1256 GTEX-S95S-1026-SM-4B64M 1 B1 2 aliquots, ~10x7mm, prominent nodular glandular hyperplasia ensquared 6.1 Prostate Prostate 0002367 269 1015 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.986384 427495 0.962815 0.989713 0.757852 25490 1 76 0.00239601 159 0 8.18419e+07 0.0369158 379039 8.26926e+07 7.6359e+06 25532 4.06711e+07 0 0.204964 0.989713 0.750055 8.18419e+07 0.00344786 1.7823e+07 9.77287e+06 1.78983e+07 201 1.79345e+07 1.09826e+07 0.00292016 1.8048e+07 50.1577 0.00458371 0.993042 0 50.1055 GTEX-S95S-1126-SM-4B64E 1 B1 2 aliquots, ~10x8mm. Spermatogenesis appears present but reduced 6.2 Testis Testis 0000473 271 1014 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.985969 857121 0.915219 0.989742 0.718179 33906 1 76 0.00237755 214 0 9.99513e+07 0.0844647 1.01694e+06 1.00987e+08 9.78059e+06 33972 4.96669e+07 0 0.197039 0.989742 0.710813 9.99513e+07 0.00336451 2.02679e+07 2.78216e+07 2.04626e+07 246 2.06197e+07 1.53861e+07 0.00286915 2.04494e+07 49.7928 0.01007 0.993515 0 50.239 GTEX-S95S-1226-SM-4GICG 0 B1 6 pieces, ~7x2.5mm. Squamous epithelium is ~1-3% of thickness 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 275 1011 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.985722 190361 0.970815 0.988532 0.814187 25374 1 76 0.00230003 205 0 7.69788e+07 0.0290192 785554 7.78718e+07 7.53331e+06 25392 3.82837e+07 0 0.156628 0.988532 0.80485 7.69788e+07 0.00363633 1.68092e+07 8.40688e+06 1.69165e+07 206 1.68989e+07 1.15619e+07 0.00296628 1.70356e+07 50.2015 0.0100878 0.991342 0 50.1592 GTEX-S95S-1326-SM-2XCDK 0 B1 2 aliquots, ~9x6mm 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 277 1010 BP-23281 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.79132 211241 0.968799 0.798295 0.823553 22235 1 76 0.00274408 125 0 6.07112e+07 0.0309325 381816 7.60510e+07 9.4571e+06 22249 2.99968e+07 0 0.145246 0.798295 0.657438 6.07112e+07 0.0131408 1.31213e+07 1.0494e+07 1.32671e+07 134 1.34461e+07 1.00994e+07 0.00789704 1.34409e+07 49.9903 0.00502052 0.80527 0 50.2764 GTEX-S95S-1426-SM-2XCDM 0 B1 2 aliquots, ~5x4mm, one additional fragment ~3.5mm. Minimal interstitial fat 7 Muscle Muscle - Skeletal 0011907 279 1009 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.851314 113653 0.97818 0.859896 0.868964 19353 1 76 0.00248802 115 0 5.88278e+07 0.0216472 1.07382e+06 6.84127e+07 9.10228e+06 19361 2.90612e+07 0 0.109216 0.859896 0.747218 5.88278e+07 0.0127613 1.28372e+07 9.12119e+06 1.29548e+07 144 1.30989e+07 9.01176e+06 0.00757341 1.32148e+07 50.2201 0.0156962 0.868478 0 50.2281 GTEX-S95S-1426-SM-2XV5A 0 B1 2 aliquots, ~5x4mm, one additional fragment ~3.5mm. Minimal interstitial fat 7 Muscle Muscle - Skeletal 0011907 279 1009 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S95S-1526-SM-2XCDH 0 B1 2 aliquots, ~5x3mm, discontinuous adherent rim of fat, up to 0.5mm thickness 6 Nerve Nerve - Tibial 0001323 304 984 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.976079 236980 0.966417 0.982523 0.766336 24826 1 76 0.00286173 169 0 9.32294e+07 0.0333226 314025 9.48877e+07 1.00291e+07 24871 4.61664e+07 0 0.200081 0.982523 0.752943 9.32294e+07 0.0126814 2.02588e+07 8.62574e+06 2.04966e+07 200 2.06572e+07 1.34293e+07 0.00773937 2.06667e+07 50.0115 0.00330944 0.988968 0 50.2918 GTEX-S95S-1526-SM-2XV56 0 B1 2 aliquots, ~5x3mm, discontinuous adherent rim of fat, up to 0.5mm thickness 6 Nerve Nerve - Tibial 0001323 304 984 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-S95S-1626-SM-2XCDJ 0 B1 2 aliquots, ~2mm d. Small tags of focally adherent fibrous tissue ensquared. 7.2 Blood Vessel Artery - Tibial 0007610 312 977 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.760952 69419 0.97066 0.772648 0.82743 20978 1 76 0.00272303 109 0 4.38468e+07 0.0289907 226030 5.67487e+07 7.82592e+06 20986 2.15218e+07 0 0.14323 0.772648 0.639313 4.38468e+07 0.0143482 9.16884e+06 3.83853e+06 9.33806e+06 114 9.60234e+06 7.6004e+06 0.00844763 9.52032e+06 49.7856 0.003983 0.784345 0 50.4572 GTEX-S95S-1626-SM-2XV5P 0 B1 2 aliquots, ~2mm d. Small tags of focally adherent fibrous tissue ensquared. 7.2 Blood Vessel Artery - Tibial 0007610 312 977 BP-23283 RNA isolation_PAXgene Tissue miRNA 03/21/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SE5C-0003-SM-325AC B1 Blood Whole Blood 0013756 -130 BP-22604 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003117_R01C01 GTEX-SE5C-0003-SM-325HT B1 Blood Whole Blood 0013756 -130 BP-22604 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R03C02 GTEX-SE5C-0003-SM-4X61V B1 Blood Whole Blood 0013756 -130 BP-22604 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) EXCLUDE GTEX-SE5C-0003-SM-6WBS1 B1 Blood Whole Blood 0013756 -130 BP-22604 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/23/2012 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-SE5C-0006-SM-4BRW5 B1 8.1 Blood Whole Blood 0013756 -130 BP-22634 RNA isolation_PAXgene Blood RNA (Manual) 02/24/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.986013 894374 0.945488 0.988225 0.801499 17806 1 76 0.0027532 118 0 6.00115e+07 0.0537941 490019 6.07266e+07 6.05086e+06 17813 2.9832e+07 0 0.143989 0.988225 0.792061 6.00115e+07 0.00384211 1.29393e+07 3.75632e+07 1.30935e+07 123 1.31299e+07 1.19903e+07 0.00329644 1.30515e+07 49.8503 0.00806927 0.990437 0 50.296 GTEX-SE5C-0008-SM-4B64J B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 230 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.991596 1.01377e+06 0.964205 0.993933 0.829799 22737 1 76 0.00202591 302 0 1.15454e+08 0.0353861 353903 1.16158e+08 1.05515e+07 22768 5.74663e+07 0 0.134405 0.993933 0.824765 1.15454e+08 0.00275777 2.53482e+07 2.83924e+07 2.56188e+07 308 2.57304e+07 2.59222e+07 0.00239098 2.5497e+07 49.7722 0.00304673 0.99627 0 50.2654 GTEX-SE5C-0326-SM-4BRWX 1 B1 2 pieces 9x8 & 8x4 mm; over 50% external adipose tissue 6.6 Pancreas Pancreas 0001150 158 994 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990574 488669 0.972297 0.992832 0.819838 21184 1 76 0.00250718 107 0 6.4352e+07 0.0275426 258679 6.48166e+07 6.18379e+06 21201 3.20202e+07 0 0.152459 0.992832 0.813962 6.4352e+07 0.00326906 1.4619e+07 1.50152e+07 1.47418e+07 116 1.47531e+07 1.58875e+07 0.00288725 1.4757e+07 50.0065 0.00399094 0.99509 0 50.2092 GTEX-SE5C-0426-SM-4BRUI 1 B1 2 pieces 4 mm arteries with virtually no sclerosis; ~20% adherent adipose 7.7 Blood Vessel Artery - Coronary 0001621 163 990 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.99184 429693 0.978951 0.993998 0.871155 20971 1 76 0.00211962 162 0 7.38012e+07 0.020677 278278 7.42468e+07 7.54906e+06 20981 3.67381e+07 0 0.107796 0.993998 0.865927 7.38012e+07 0.00284827 1.6217e+07 5.81670e+06 1.63123e+07 180 1.63455e+07 1.52805e+07 0.00248315 1.63381e+07 49.9886 0.00374801 0.996157 0 50.1465 GTEX-SE5C-0526-SM-2XCE1 1 B1 2 pieces 10x6 mm; patchy emphysema 6.6 Lung Lung 0008952 165 989 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.594668 74954 0.97185 0.601731 0.804957 21137 1 76 0.00294391 138 0 3.39443e+07 0.0276088 217822 5.64111e+07 7.518e+06 21153 1.66827e+07 0 0.166894 0.601731 0.484367 3.39443e+07 0.0141924 7.38127e+06 3.16627e+06 7.52435e+06 160 7.64847e+06 5.09675e+06 0.00850216 7.63497e+06 49.9558 0.00386133 0.608793 0 50.48 GTEX-SE5C-0526-SM-2XV6Y 1 B1 2 pieces 10x6 mm; patchy emphysema 6.6 Lung Lung 0008952 165 989 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SE5C-0526-SM-CKJTH 1 B1 2 pieces 10x6 mm; patchy emphysema Lung Lung 0008952 165 989 BP-23388 DNA Isolation from Tissue via QIAgen Spin Column 03/26/2012 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-SE5C-0626-SM-2XCDV 1 B1 2 pieces 11x7 & 9x5 mm; no extraneous tissue 8.6 Heart Heart - Left Ventricle 0006566 167 988 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.966526 194602 0.981703 0.97219 0.860419 21683 1 76 0.00250291 223 0 1.13472e+08 0.0180137 2.77502e+06 1.16718e+08 1.35779e+07 21702 5.62977e+07 0 0.121284 0.97219 0.836491 1.13472e+08 0.0124667 2.47506e+07 1.51334e+07 2.5192e+07 266 2.51365e+07 1.84537e+07 0.00745577 2.53428e+07 50.2044 0.0237755 0.977854 0 50.4418 GTEX-SE5C-0626-SM-3P5ZJ 1 B1 2 pieces 11x7 & 9x5 mm; no extraneous tissue 8.6 Heart Heart - Left Ventricle 0006566 167 988 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-2386 12/16/2012 TruSeq.v1 EXCLUDE 0.952743 370683 0.981834 0.974455 0.859072 20725 1 76 0.00284375 270 0 9.40027e+07 0.0178876 2.1475e+06 9.6467e+07 1.30668e+07 20741 4.5864e+07 0 0.122762 0.974455 0.837127 9.40027e+07 0.00416666 2.02061e+07 1.99225e+07 2.024e+07 294 2.10012e+07 1.6501e+07 0.00349046 2.12474e+07 50.2914 0.0222615 0.996167 0 50.0419 GTEX-SE5C-0626-SM-4IHLJ 1 B1 2 pieces 11x7 & 9x5 mm; no extraneous tissue 8.6 Heart Heart - Left Ventricle 0006566 167 988 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.991772 312903 0.982925 0.993894 0.8749 18903 1 76 0.00196142 118 0 5.611e+07 0.0168064 1.19026e+06 5.64547e+07 3.93709e+06 18910 2.79296e+07 0 0.108025 0.993894 0.869558 5.611e+07 0.00262478 1.23521e+07 6.61592e+06 1.25341e+07 147 1.24797e+07 9.4795e+06 0.00229239 1.25041e+07 50.0489 0.0210835 0.996016 0 50.3656 GTEX-SE5C-0726-SM-4BRWY 1 B1 2 pieces8x4 & 9x6 mm 5.8 Thyroid Thyroid 0002046 170 985 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989952 328109 0.962413 0.992253 0.729947 22894 1 76 0.00232071 113 0 5.4256e+07 0.0373457 321282 5.46796e+07 5.08852e+06 22926 2.69943e+07 0 0.232466 0.992253 0.724292 5.4256e+07 0.00306079 1.18227e+07 5.10141e+06 1.18851e+07 121 1.19232e+07 7.90518e+06 0.00268989 1.19027e+07 49.9571 0.00587572 0.994554 0 50.1316 GTEX-SE5C-0926-SM-4BRUF 0 B1 2 pieces 8x3 & 6x5 mm; excellent preservation 8.5 Fallopian Tube Fallopian Tube 0003889 180 976 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989508 326942 0.974511 0.991638 0.823571 22276 1 76 0.00215748 118 0 5.54776e+07 0.0252137 203081 5.59455e+07 4.95722e+06 22289 2.76165e+07 0 0.15094 0.991638 0.816684 5.54776e+07 0.00284433 1.2159e+07 5.30189e+06 1.2271e+07 129 1.22851e+07 1.06107e+07 0.00250017 1.22629e+07 49.9547 0.00362998 0.993768 0 50.2293 GTEX-SE5C-1026-SM-4BRUG 1 B1 6 pieces up to 8x5 mm; only one piece has mucosa 7.7 Bladder Bladder 0001255 185 972 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991046 394834 0.97632 0.993359 0.848322 21412 1 76 0.00221069 158 0 7.20529e+07 0.0234005 491168 7.25345e+07 7.10549e+06 21427 3.58567e+07 0 0.127998 0.993359 0.842688 7.20529e+07 0.00291208 1.53892e+07 5.93035e+06 1.55196e+07 172 1.55018e+07 1.36655e+07 0.00256057 1.55585e+07 50.0913 0.0067715 0.995672 0 50.2108 GTEX-SE5C-1126-SM-4BRWZ 0 B1 6 pieces up to 8x4 mm; all with epithelium 8.4 Vagina Vagina 0000996 186 972 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991091 441925 0.97305 0.993002 0.825223 21958 1 76 0.00223751 139 0 6.46143e+07 0.0267346 313228 6.50697e+07 5.97203e+06 21971 3.21677e+07 0 0.147826 0.993002 0.819448 6.46143e+07 0.00297972 1.4318e+07 9.12302e+06 1.44251e+07 152 1.44353e+07 1.19764e+07 0.0026079 1.44294e+07 49.9898 0.00481373 0.994913 0 50.1863 GTEX-SE5C-1226-SM-4BRWV 1 B1 6 pieces up to 6x3 mm; all are MUCOSA, 9 Esophagus Esophagus - Mucosa 0006920 188 970 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990172 395414 0.976798 0.992818 0.834125 21900 1 76 0.00224552 156 0 7.12543e+07 0.0228269 515972 7.17697e+07 7.01906e+06 21915 3.54534e+07 0 0.142673 0.992818 0.828134 7.12543e+07 0.00292772 1.59414e+07 9.22523e+06 1.60671e+07 165 1.6119e+07 1.3991e+07 0.00258571 1.60706e+07 49.9248 0.00718927 0.995464 0 50.1964 GTEX-SE5C-1326-SM-4BRUH 1 B1 6 pieces up to 6x3 mm;3 are muscularis 3 are adventitia 8.3 Esophagus Esophagus - Muscularis 0004648 190 968 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991803 410288 0.97254 0.993615 0.823081 22406 1 76 0.00219638 152 0 6.68175e+07 0.0271809 473988 6.72469e+07 6.08076e+06 22427 3.3267e+07 0 0.149458 0.993615 0.817825 6.68175e+07 0.00290327 1.46156e+07 5.66814e+06 1.47242e+07 158 1.47237e+07 1.19953e+07 0.00254918 1.47309e+07 50.0123 0.00704847 0.995426 0 50.1851 GTEX-SE5C-1526-SM-4BRWU 0 B1 6 pieces up to 7x4 mm; mucosa ~0.4 mm; very good mucosal preservation in all 6 pieces 7.7 Colon Colon - Transverse 0001157 200 961 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989711 403401 0.972807 0.992191 0.814421 22902 1 76 0.00236075 141 0 6.22589e+07 0.0264963 952657 6.27489e+07 6.264e+06 22928 3.09579e+07 0 0.158387 0.992191 0.80806 6.22589e+07 0.00318138 1.37128e+07 7.14705e+06 1.38467e+07 156 1.3815e+07 9.38139e+06 0.00277004 1.38836e+07 50.1239 0.015182 0.99467 0 50.2429 GTEX-SE5C-1626-SM-2XCE3 0 B1 6 pieces up to 8x3 mm 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 215 946 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 TruSeq.v1 RNASEQ 0.975552 367388 0.972392 0.980668 0.856272 23769 1 76 0.00255532 351 0 1.318e+08 0.0273902 1.62087e+06 1.34398e+08 1.48575e+07 23790 6.54273e+07 0 0.11612 0.980668 0.839719 1.318e+08 0.0120874 2.87506e+07 1.93108e+07 2.88732e+07 331 2.8989e+07 2.38972e+07 0.0072965 2.9241e+07 50.2163 0.0120602 0.985785 0 50.1064 GTEX-SE5C-1826-SM-2XCE4 1 B1 2 pieces 13x6 & 10x6 mm; minimal adipose 7.7 Muscle Muscle - Skeletal 0011907 223 940 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.905676 192094 0.976949 0.910454 0.860919 22211 1 76 0.002482 158 0 8.06448e+07 0.0228363 953801 8.85764e+07 8.67123e+06 22226 3.99938e+07 0 0.11603 0.910454 0.783828 8.06448e+07 0.0116611 1.77596e+07 6.93186e+06 1.76608e+07 185 1.77341e+07 1.4602e+07 0.00704746 1.80655e+07 50.4628 0.0107681 0.915233 0 49.8605 GTEX-SE5C-2026-SM-EAZ2U 1 B1 2 pieces 2 mm arteries with no abnormalities 5.5 Blood Vessel Artery - Tibial 0007610 230 934 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990129 467388 0.973175 0.990889 0.846473 21591 1 76 0.00191277 209 0 8.5033e+07 0.0265003 373634 8.58148e+07 7.38765e+06 21611 4.23665e+07 0 0.126703 0.990889 0.83876 8.5033e+07 0.00266797 1.82868e+07 6.87908e+06 1.84151e+07 220 1.83584e+07 1.65152e+07 0.00229008 1.84105e+07 50.0709 0.00435396 0.991648 0 50.1748 GTEX-SE5C-2126-SM-4BRUJ 1 B1 2 pieces 9x7 & 8x5 mm; fibrocystic changes; ~20 & 40% adipose admixed 6 Breast Breast - Mammary Tissue 0008367 221 944 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990715 355098 0.972229 0.993001 0.834048 22305 1 76 0.00220834 124 0 5.54002e+07 0.027412 455395 5.57907e+07 5.05628e+06 22321 2.75609e+07 0 0.138181 0.993001 0.828211 5.54002e+07 0.00293618 1.21841e+07 6.22438e+06 1.22716e+07 141 1.22699e+07 9.43618e+06 0.00257142 1.2309e+07 50.0795 0.00816256 0.995288 0 50.1788 GTEX-SIU7-0001-SM-3NMAW B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -65 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2351 12/16/2012 TruSeq.v1 EXCLUDE 0.990406 1.63517e+06 0.960211 0.992659 0.820754 22435 1 76 0.00411134 222 0 1.08626e+08 0.0386493 789572 1.09429e+08 2.05386e+07 22462 5.40011e+07 0 0.139457 0.992659 0.814729 1.08626e+08 0.00530282 2.39343e+07 2.50911e+07 2.39773e+07 221 2.40795e+07 2.51756e+07 0.00470573 2.4088e+07 50.0088 0.00721536 0.994912 0 50.0449 GTEX-SIU7-0002-SM-2VCU5 B1 Blood Whole Blood 0013756 -65 BP-22654 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2012 GTEx_5M_batch6_Apr12 05/03/2012 Illumina OMNI SNP Array OMNI 7319532002_R03C01 GTEX-SIU7-0002-SM-2XK2N B1 Blood Whole Blood 0013756 -65 BP-22654 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R02C01 GTEX-SIU7-0002-SM-4SVPJ B1 Blood Whole Blood 0013756 -65 BP-22654 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SIU7-0002-SM-5JK4G B1 Blood Whole Blood 0013756 -65 BP-22654 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/24/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-SIU7-0006-SM-2XCE6 B1 6.9 Blood Whole Blood 0013756 -65 BP-22705 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.944442 1.42506e+06 0.936607 0.950363 0.780119 20198 1 76 0.00374746 150 0 1.1317e+08 0.0624429 205031 1.19081e+08 1.51145e+07 20214 5.60434e+07 0 0.156488 0.950363 0.741396 1.1317e+08 0.0135581 2.3663e+07 9.27999e+07 2.39438e+07 182 2.42548e+07 2.19739e+07 0.0086222 2.40256e+07 49.7627 0.00172178 0.956284 0 50.2948 GTEX-SIU7-0226-SM-4BRX2 1 B1 2 pieces 8x5 & 7x5 mm; eccentric plaques with wide lumens; 40% external adipose 6 Blood Vessel Artery - Coronary 0001621 75 1062 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.991233 571508 0.974581 0.992907 0.83762 23667 1 76 0.00270156 275 0 9.51555e+07 0.0247229 552909 9.58353e+07 8.98188e+06 23695 4.73557e+07 0 0.136961 0.992907 0.831678 9.51555e+07 0.00328454 2.09745e+07 9.41261e+06 2.10767e+07 297 2.10956e+07 1.70669e+07 0.00299256 2.11063e+07 50.0126 0.00576937 0.994581 0 50.1215 GTEX-SIU7-0426-SM-2XCDX 1 B1 2pieces 9x6 & 8x7 mm; patchy fibrosis <10%(old infarcts) 7.3 Heart Heart - Left Ventricle 0006566 83 1055 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.437962 44472 0.981758 0.443992 0.866832 18345 1 76 0.00303485 93 0 3.12500e+07 0.0179095 1.07854e+06 7.03843e+07 1.04113e+07 18347 1.53174e+07 0 0.114926 0.443992 0.384866 3.12500e+07 0.0139403 6.77776e+06 4.40714e+06 7.00074e+06 111 7.1151e+06 3.99222e+06 0.00841353 7.04647e+06 49.7577 0.0153235 0.450021 0 50.8092 GTEX-SIU7-0426-SM-2XV6U 1 B1 2pieces 9x6 & 8x7 mm; patchy fibrosis <10%(old infarcts) 7.3 Heart Heart - Left Ventricle 0006566 83 1055 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU7-0526-SM-2XV5V 1 B1 2 pieces 8x8 mm; no inflammation 8.7 Lung Lung 0008952 85 1054 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU7-0526-SM-3NM8I 1 B1 2 pieces 8x8 mm; no inflammation 8.7 Lung Lung 0008952 85 1054 BP-23387 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 EXCLUDE 0.991332 453903 0.97454 0.993456 0.826473 23827 1 76 0.00386486 208 0 9.75874e+07 0.0250612 346463 9.82303e+07 1.83215e+07 23855 4.8546e+07 0 0.148067 0.993456 0.821065 9.75874e+07 0.00493869 2.15879e+07 1.2201e+07 2.16187e+07 242 2.16626e+07 1.86444e+07 0.00440063 2.17466e+07 50.0968 0.00352705 0.995579 0 50.0357 GTEX-SIU7-0926-SM-4BRX1 1 B1 2 pieces 11x8 & 8x8 mm; ~50 % adipose intermingled with parenchyma; islets present 7.1 Pancreas Pancreas 0001150 98 1044 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.990351 540897 0.972585 0.992502 0.833302 21955 1 76 0.00263701 113 0 7.60257e+07 0.0271446 233609 7.66e+07 7.5204e+06 21974 3.7812e+07 0 0.139283 0.992502 0.827054 7.60257e+07 0.00346391 1.72804e+07 1.74755e+07 1.74559e+07 127 1.74918e+07 1.98061e+07 0.00304957 1.74103e+07 49.8832 0.00304973 0.994654 0 50.2526 GTEX-SIU7-1126-SM-2XCDW 1 B1 2 pieces 11x9 & 10x7 mm; microfollicular adenomatoid nodules 6.6 Thyroid Thyroid 0002046 113 1030 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.973703 1.54684e+06 0.914262 0.979707 0.671284 24135 1 76 0.00297976 137 0 9.67247e+07 0.08541 721179 9.87282e+07 1.06899e+07 24191 4.79328e+07 0 0.242979 0.979707 0.657661 9.67247e+07 0.0124456 1.98743e+07 6.3987e+07 2.0104e+07 166 2.02873e+07 1.25028e+07 0.00768369 2.02619e+07 49.9687 0.00730469 0.985711 0 50.2873 GTEX-SIU7-1126-SM-2XV72 1 B1 2 pieces 11x9 & 10x7 mm; microfollicular adenomatoid nodules 6.6 Thyroid Thyroid 0002046 113 1030 BP-23389 RNA isolation_PAXgene Tissue miRNA 03/26/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU7-1326-SM-2VCU7 1 B1 6 pieces up to 9x5 mm; Esophagus Esophagus - Muscularis 0004648 120 1025 BP-23466 DNA Isolation from Tissue via QIAgen Spin Column 03/27/2012 GTEx_5M_batch6_Apr12 05/03/2012 Illumina OMNI SNP Array EXCLUDE 7319532002_R04C01 GTEX-SIU7-1326-SM-2XK3D 1 B1 6 pieces up to 9x5 mm; Esophagus Esophagus - Muscularis 0004648 120 1025 BP-23466 DNA Isolation from Tissue via QIAgen Spin Column 03/27/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R06C02 GTEX-SIU7-1326-SM-4BRWW 1 B1 6 pieces up to 9x5 mm; 6.8 Esophagus Esophagus - Muscularis 0004648 120 1025 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.990778 320586 0.975878 0.992756 0.835989 21227 1 76 0.00238768 132 0 5.88173e+07 0.0238814 814365 5.92465e+07 5.56971e+06 21242 2.92762e+07 0 0.139889 0.992756 0.829933 5.88173e+07 0.00307437 1.28186e+07 5.3042e+06 1.29074e+07 144 1.29048e+07 9.78789e+06 0.00273034 1.29302e+07 50.0493 0.0137454 0.994734 0 50.1725 GTEX-SIU7-1426-SM-4BRWT 1 B1 6 pieces up to 10x4 mm; 3 with muscularis; all with mucosa 6.4 Stomach Stomach 0000945 125 1020 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.991308 345763 0.976071 0.993414 0.838252 22240 1 76 0.00239792 157 0 6.43417e+07 0.0235489 838298 6.47682e+07 6.58758e+06 22253 3.20247e+07 0 0.137818 0.993414 0.832732 6.43417e+07 0.00314267 1.41571e+07 9.65523e+06 1.42371e+07 159 1.42437e+07 1.14141e+07 0.00276951 1.42774e+07 50.0591 0.012943 0.99552 0 50.1409 GTEX-SIU7-1526-SM-4BRWQ 1 B1 2 pieces 13x8 & 11x11 mm; complete arrest of spermatogenesis; only Sertoli cells remain (germ cell aplasia) 7 Testis Testis 0000473 135 1011 BP-23390 RNA isolation_PAXgene Tissue miRNA 03/26/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.990654 564593 0.967586 0.992938 0.791332 23885 1 76 0.0025372 149 0 7.08961e+07 0.0321882 1.18636e+06 7.14004e+07 6.50934e+06 23916 3.52567e+07 0 0.176255 0.992938 0.785743 7.08961e+07 0.00328252 1.55959e+07 7.49136e+06 1.56826e+07 170 1.57256e+07 1.01629e+07 0.00290901 1.5703e+07 49.9641 0.0166156 0.995222 0 50.1385 GTEX-SIU7-1626-SM-4BRUK 1 B1 2 pieces 10x7 & 11x7 mm; fibrocystic change in gynecomastia; 60% adipose 7.2 Breast Breast - Mammary Tissue 0008367 165 981 BP-23467 RNA isolation_PAXgene Tissue miRNA 03/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.989658 357313 0.9666 0.991969 0.753464 23497 1 76 0.00248767 116 0 5.77742e+07 0.0331159 218729 5.82419e+07 5.13227e+06 23522 2.87373e+07 0 0.213136 0.991969 0.747413 5.77742e+07 0.00323639 1.26928e+07 5.58935e+06 1.27541e+07 126 1.27896e+07 9.23282e+06 0.00286116 1.27862e+07 49.9932 0.00375552 0.994281 0 50.1204 GTEX-SIU7-1726-SM-2XCDZ 1 B1 6 pieces up to 9x4 mm 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 168 979 BP-23467 RNA isolation_PAXgene Tissue miRNA 03/27/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.949809 156697 0.975957 0.956658 0.819828 23512 1 76 0.00277423 173 0 9.18138e+07 0.0237666 405755 9.59736e+07 1.19181e+07 23538 4.54634e+07 0 0.156129 0.956658 0.784295 9.18138e+07 0.0125659 2.01008e+07 8.00953e+06 2.02362e+07 196 2.04482e+07 1.53344e+07 0.00763499 2.05021e+07 50.0658 0.00422778 0.963506 0 50.1678 GTEX-SIU7-1726-SM-2XV4K 1 B1 6 pieces up to 9x4 mm 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 168 979 BP-23467 RNA isolation_PAXgene Tissue miRNA 03/27/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU7-1826-SM-2VCU6 1 B1 2 pieces 10x10 & 11x8 mm; moderate to severe atrophy and vacuolar degeneration; ~40% adipose in one aliquot; <10% in the other Muscle Muscle - Skeletal 0011907 169 979 BP-23579 DNA Isolation from Tissue via QIAgen Spin Column 03/29/2012 GTEx_5M_batch6_Apr12 05/02/2012 Illumina OMNI SNP Array EXCLUDE 6762330002_R04C01 GTEX-SIU7-1826-SM-2XCE2 1 B1 2 pieces 10x10 & 11x8 mm; moderate to severe atrophy and vacuolar degeneration; ~40% adipose in one aliquot; <10% in the other 8 Muscle Muscle - Skeletal 0011907 169 979 BP-23467 RNA isolation_PAXgene Tissue miRNA 03/27/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.54097 85235 0.977057 0.545715 0.866198 19465 1 76 0.00277422 136 0 3.79702e+07 0.0224423 429070 6.95788e+07 8.94811e+06 19469 1.8711e+07 0 0.110858 0.545715 0.472697 3.79702e+07 0.013592 8.11367e+06 5.16114e+06 8.29212e+06 151 8.37125e+06 7.66668e+06 0.00813607 8.34195e+06 49.9123 0.00616668 0.55046 0 50.5439 GTEX-SIU7-1826-SM-2XK3C 1 B1 2 pieces 10x10 & 11x8 mm; moderate to severe atrophy and vacuolar degeneration; ~40% adipose in one aliquot; <10% in the other Muscle Muscle - Skeletal 0011907 169 979 BP-23579 DNA Isolation from Tissue via QIAgen Spin Column 03/29/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7985164002_R04C01 GTEX-SIU7-1826-SM-2XV6Z 1 B1 2 pieces 10x10 & 11x8 mm; moderate to severe atrophy and vacuolar degeneration; ~40% adipose in one aliquot; <10% in the other 8 Muscle Muscle - Skeletal 0011907 169 979 BP-23467 RNA isolation_PAXgene Tissue miRNA 03/27/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0002-SM-325AJ C1 Blood Whole Blood 0013756 1115 BP-22669 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 6992696016_R03C01 GTEX-SIU8-0002-SM-325HY C1 Blood Whole Blood 0013756 1115 BP-22669 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R03C01 GTEX-SIU8-0002-SM-4SVQ6 C1 Blood Whole Blood 0013756 1115 BP-22669 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SIU8-0002-SM-5JK47 C1 Blood Whole Blood 0013756 1115 BP-22669 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/27/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-SIU8-0006-SM-2XCE5 C1 8.4 Blood Whole Blood 0013756 1115 BP-22705 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.705411 253257 0.974667 0.709248 0.754633 20218 1 76 0.00314976 116 0 6.37296e+07 0.0242319 136383 8.98551e+07 1.19077e+07 20229 3.14802e+07 0 0.220035 0.709248 0.535222 6.37296e+07 0.0139631 1.47057e+07 6.64276e+07 1.46205e+07 140 1.47217e+07 1.37271e+07 0.00852718 1.49562e+07 50.395 0.00151781 0.713086 0 49.8546 GTEX-SIU8-0006-SM-2XV6N C1 8.4 Blood Whole Blood 0013756 1115 BP-22705 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0008-SM-4BRUC C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 1232 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992099 489273 0.975441 0.994176 0.845668 21074 1 76 0.00214169 190 0 7.72992e+07 0.0241843 239707 7.7752e+07 7.44446e+06 21094 3.84846e+07 0 0.129773 0.994176 0.840742 7.72992e+07 0.00271689 1.72714e+07 9.1487e+06 1.74038e+07 181 1.74938e+07 1.69615e+07 0.00242869 1.73334e+07 49.7697 0.00308297 0.996252 0 50.1909 GTEX-SIU8-0126-SM-2XCDT 1 C1 6 pieces, ~7x3mm. Squamous epithelium is ~2-3% thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1231 1063 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.937827 128973 0.971634 0.945014 0.807224 24173 1 76 0.00284912 148 0 8.11939e+07 0.0281562 501535 8.59182e+07 9.86362e+06 24198 4.01828e+07 0 0.16441 0.945014 0.762838 8.11939e+07 0.0128171 1.77542e+07 9.17506e+06 1.79068e+07 171 1.80938e+07 1.29022e+07 0.00779522 1.81484e+07 50.0753 0.00583735 0.952202 0 50.2139 GTEX-SIU8-0126-SM-2XV58 1 C1 6 pieces, ~7x3mm. Squamous epithelium is ~2-3% thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1231 1063 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0226-SM-2XCDS 1 C1 2 pieces, ~8x6mm 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1234 1061 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.768759 143891 0.972911 0.773564 0.804376 23505 1 76 0.00281783 146 0 7.72685e+07 0.0267227 354266 9.98864e+07 1.17991e+07 23538 3.82376e+07 0 0.168535 0.773564 0.622236 7.72685e+07 0.0127965 1.68338e+07 7.72406e+06 1.70296e+07 172 1.71429e+07 1.19127e+07 0.00777617 1.71654e+07 50.0327 0.00354669 0.778369 0 50.2891 GTEX-SIU8-0226-SM-2XV4Q 1 C1 2 pieces, ~8x6mm 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1234 1061 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0326-SM-2XCDR 1 C1 2 pieces 7.4 Nerve Nerve - Tibial 0001323 1256 1040 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.94803 174474 0.964402 0.952945 0.752916 25410 1 76 0.00283779 180 0 1.00693e+08 0.0353098 232519 1.05666e+08 1.20117e+07 25459 4.99489e+07 0 0.211486 0.952945 0.717488 1.00693e+08 0.0118932 2.20084e+07 1.00959e+07 2.20884e+07 189 2.22753e+07 1.56725e+07 0.00734213 2.23031e+07 50.0311 0.00220052 0.957859 0 50.0908 GTEX-SIU8-0326-SM-2XV4V 1 C1 2 pieces 7.4 Nerve Nerve - Tibial 0001323 1256 1040 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0426-SM-4BRUE 1 C1 2 pieces ~2mm d. Good, clean specimens 5.9 Blood Vessel Artery - Tibial 0007610 1259 1037 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98683 377152 0.968049 0.988941 0.780369 22049 1 76 0.00240426 129 0 6.27916e+07 0.0316713 284967 6.34938e+07 6.00059e+06 22069 3.12209e+07 0 0.18768 0.988941 0.771739 6.27916e+07 0.00324395 1.35113e+07 5.50707e+06 1.36121e+07 146 1.36178e+07 1.00436e+07 0.00282321 1.36336e+07 50.0288 0.00448811 0.991052 0 50.1858 GTEX-SIU8-0526-SM-2XCDP 1 C1 2 pieces, ~9x6mm. LDACC NOTE: One has ~15% central interstital fatty streak 8.4 Muscle Muscle - Skeletal 0011907 1263 1035 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.743571 111878 0.978692 0.750189 0.860184 20175 1 76 0.00247899 116 0 6.90294e+07 0.0210309 561832 9.2016e+07 1.22626e+07 20184 3.41128e+07 0 0.118508 0.750189 0.6453 6.90294e+07 0.0129235 1.47649e+07 7.64864e+06 1.50264e+07 143 1.52191e+07 1.33081e+07 0.00765517 1.51295e+07 49.8525 0.00610581 0.756806 0 50.4388 GTEX-SIU8-0526-SM-2XV5O 1 C1 2 pieces, ~9x6mm. LDACC NOTE: One has ~15% central interstital fatty streak 8.4 Muscle Muscle - Skeletal 0011907 1263 1035 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0626-SM-2XCDN 1 C1 2 pieces ~8x7mm, focus of entrapped skeletal muscle encircled (probable embedding artifact) 7 Thyroid Thyroid 0002046 1304 994 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.955782 230221 0.960968 0.963125 0.69419 25984 1 76 0.00302774 146 0 9.08268e+07 0.0386963 211999 9.43043e+07 1.10731e+07 26044 4.49092e+07 0 0.266778 0.963125 0.668592 9.08268e+07 0.0133279 1.96125e+07 8.84381e+06 1.97896e+07 172 2.00538e+07 1.20954e+07 0.00813854 1.99856e+07 49.9148 0.00224803 0.970468 0 50.2247 GTEX-SIU8-0626-SM-2XV5R 1 C1 2 pieces ~8x7mm, focus of entrapped skeletal muscle encircled (probable embedding artifact) 7 Thyroid Thyroid 0002046 1304 994 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0826-SM-2XCDQ 1 C1 2 pieces, ~8x6mm. Mild interstital fibrosis.chronic ischemic changes 6.6 Heart Heart - Left Ventricle 0006566 1310 990 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.619251 58967 0.975904 0.629389 0.844111 19969 1 76 0.0027204 104 0 3.2956e+07 0.023971 1.37476e+06 5.23619e+07 6.72002e+06 19976 1.6156e+07 0 0.131794 0.629389 0.531274 3.2956e+07 0.013614 7.21733e+06 4.26804e+06 7.30862e+06 120 7.50899e+06 3.59898e+06 0.00807949 7.51513e+06 50.0204 0.0262549 0.639527 0 50.3143 GTEX-SIU8-0826-SM-2XV65 1 C1 2 pieces, ~8x6mm. Mild interstital fibrosis.chronic ischemic changes 6.6 Heart Heart - Left Ventricle 0006566 1310 990 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0926-SM-2XCDO 2 C1 2 pieces ~8x7mm, moderate congestion 6.1 Lung Lung 0008952 1312 989 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 EXCLUDE 0.269514 26377 0.966043 0.278968 0.740534 19269 1 76 0.00343509 114 0 1.51975e+07 0.0332997 85880 5.44777e+07 8.66408e+06 19274 7.27059e+06 0 0.225509 0.278968 0.206585 1.51975e+07 0.0158195 3.18646e+06 2.43827e+06 3.2944e+06 116 3.52645e+06 2.09915e+06 0.00941742 3.4506e+06 49.4564 0.00157642 0.288422 0 50.8328 GTEX-SIU8-0926-SM-2XV6Q 2 C1 2 pieces ~8x7mm, moderate congestion 6.1 Lung Lung 0008952 1312 989 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SIU8-0926-SM-5SI87 2 C1 2 pieces ~8x7mm, moderate congestion 6.1 Lung Lung 0008952 1312 989 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990617 228638 0.970686 0.992832 0.750452 23275 1 76 0.00228468 153 0 7.37469e+07 0.0288686 354302 7.42793e+07 6.01527e+06 23305 3.66827e+07 0 0.220235 0.992832 0.745072 7.37469e+07 0.00328366 1.62891e+07 8.41146e+06 1.63799e+07 174 1.63484e+07 1.03507e+07 0.00278305 1.64789e+07 50.1988 0.00476986 0.995046 0 50.139 GTEX-SIU8-0926-SM-COH1X 2 C1 2 pieces ~8x7mm, moderate congestion 6.1 Lung Lung 0008952 1312 989 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-9414 08/03/2016 TruSeq.v1 RNASEQ 0.991477 268315 0.971133 0.992838 0.760792 23454 1 76 0.0039457 159 0 7.95842e+07 0.0284203 394771 8.01583e+07 8.74702e+06 23495 3.96269e+07 0 0.210341 0.992838 0.755343 7.95842e+07 0.00449691 1.75871e+07 9.36389e+06 1.77108e+07 180 1.77084e+07 1.1559e+07 0.00422093 1.76944e+07 49.9803 0.00492489 0.994199 0 50.1752 GTEX-SIU8-2226-SM-EAZ2T 3 C1 2 pieces ~8x7mm, glandular mucosa badly autolyzed, probable glandular hyperplasia based on pattern 5.5 Prostate Prostate 0002367 1346 972 BP-23768 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.985588 222131 0.962768 0.986322 0.767423 24973 1 76 0.0021188 160 0 7.67089e+07 0.0369934 985350 7.77726e+07 6.13513e+06 25006 3.82222e+07 0 0.195345 0.986322 0.756927 7.67089e+07 0.00299621 1.68061e+07 7.76571e+06 1.70108e+07 201 1.69376e+07 9.6609e+06 0.00255718 1.69384e+07 50.0012 0.0126696 0.987057 0 50.3027 GTEX-SJXC-0003-SM-325AA C1 Blood Whole Blood 0013756 866 BP-22708 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003078_R04C01 GTEX-SJXC-0003-SM-325HP C1 Blood Whole Blood 0013756 866 BP-22708 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R06C02 GTEX-SJXC-0003-SM-4SVPY C1 Blood Whole Blood 0013756 866 BP-22708 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SJXC-0003-SM-5JK2U C1 Blood Whole Blood 0013756 866 BP-22708 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2012 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-SJXC-0005-SM-2XCE7 C1 7.7 Blood Whole Blood 0013756 866 BP-22705 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.920505 243153 0.978977 0.927243 0.772176 18893 1 76 0.00339942 117 0 6.85691e+07 0.0190921 163330 7.39495e+07 9.32085e+06 18902 3.39015e+07 0 0.206802 0.927243 0.715994 6.85691e+07 0.0147522 1.5778e+07 9.7702e+07 1.61223e+07 144 1.62637e+07 1.56629e+07 0.00903456 1.61282e+07 49.7909 0.00220867 0.93398 0 50.5395 GTEX-SJXC-0005-SM-2XV6A C1 7.7 Blood Whole Blood 0013756 866 BP-22705 RNA isolation_PAXgene Blood RNA (Manual) 02/28/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-0008-SM-4DM7G C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 974 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988712 580168 0.970428 0.991767 0.845494 20307 1 76 0.00184812 145 0 6.22648e+07 0.0292339 202544 6.27817e+07 4.49236e+06 20319 3.09531e+07 0 0.124934 0.991767 0.838533 6.22648e+07 0.00316731 1.37614e+07 1.21028e+07 1.38266e+07 132 1.39095e+07 1.54057e+07 0.00250568 1.38715e+07 49.9316 0.00322616 0.994822 0 50.1181 GTEX-SJXC-0126-SM-2XCFF 1 C1 6 pieces ~7x2.5mm. Squamous epithelium is 2-3% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 973 753 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.43827 75355 0.971909 0.440067 0.808508 22205 1 76 0.00257992 151 0 4.97237e+07 0.0273718 242946 1.12991e+08 1.44701e+07 22228 2.45222e+07 0 0.163401 0.440067 0.355797 4.97237e+07 0.0106916 1.06968e+07 5.30756e+06 1.08904e+07 149 1.09385e+07 8.15988e+06 0.00661919 1.08461e+07 49.7879 0.00215013 0.441863 0 50.4484 GTEX-SJXC-0126-SM-2XV4I 1 C1 6 pieces ~7x2.5mm. Squamous epithelium is 2-3% of thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 973 753 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-0226-SM-2XCDU 1 C1 2 pieces ~8x7mm 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 977 750 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1561 09/11/2012 TruSeq.v1 RNASEQ 0.820633 194536 0.967876 0.827814 0.801868 23348 1 76 0.00286777 128 0 6.99102e+07 0.0318143 562363 8.44517e+07 1.0502e+07 23369 3.45473e+07 0 0.166008 0.827814 0.663797 6.99102e+07 0.0125148 1.51445e+07 1.15742e+07 1.53031e+07 149 1.55146e+07 1.02678e+07 0.00764944 1.54891e+07 49.9588 0.00665899 0.834994 0 50.2605 GTEX-SJXC-0326-SM-2XCFI 1 C1 2 pieces ~4mm d. Reasonably clean specimens, minute amounts of adherent fat, ~0.3mm thick 6.4 Nerve Nerve - Tibial 0001323 1015 712 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.794962 101150 0.956075 0.797397 0.668268 22841 1 76 0.00260848 143 0 4.60493e+07 0.0436241 146734 5.77495e+07 7.01951e+06 22878 2.27822e+07 0 0.287806 0.797397 0.532875 4.60493e+07 0.00989279 1.00038e+07 4.44870e+06 1.00449e+07 150 1.0057e+07 5.14354e+06 0.00623952 1.01151e+07 50.1439 0.00254087 0.799832 0 50.1026 GTEX-SJXC-0326-SM-2XV4O 1 C1 2 pieces ~4mm d. Reasonably clean specimens, minute amounts of adherent fat, ~0.3mm thick 6.4 Nerve Nerve - Tibial 0001323 1015 712 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-0426-SM-2XCFH 1 C1 2 pieces, ~2mm d 7.2 Blood Vessel Artery - Tibial 0007610 1017 711 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.963402 180900 0.97004 0.966641 0.773876 23557 1 76 0.00238396 230 0 1.20194e+08 0.0295944 578818 1.24342e+08 1.15857e+07 23607 5.96562e+07 0 0.196164 0.966641 0.74806 1.20194e+08 0.00934925 2.57961e+07 8.94777e+06 2.60893e+07 276 2.60526e+07 1.80449e+07 0.00585494 2.62021e+07 50.1431 0.00465503 0.969881 0 50.2825 GTEX-SJXC-0426-SM-2XV53 1 C1 2 pieces, ~2mm d 7.2 Blood Vessel Artery - Tibial 0007610 1017 711 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-0526-SM-2XCFG 1 C1 2 pieces, ~10x6mm, Minimal interstitial fat (<5%) 8.2 Muscle Muscle - Skeletal 0011907 1023 706 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.962463 147834 0.979287 0.965721 0.849685 22232 1 76 0.00226653 270 0 1.3415e+08 0.020208 1.36162e+06 1.38912e+08 1.6151e+07 22257 6.65944e+07 0 0.129602 0.965721 0.820559 1.3415e+08 0.0095059 2.7927e+07 1.20696e+07 2.80116e+07 300 2.79677e+07 2.54241e+07 0.005874 2.83502e+07 50.3396 0.00980204 0.968979 0 50.0755 GTEX-SJXC-0526-SM-2XV57 1 C1 2 pieces, ~10x6mm, Minimal interstitial fat (<5%) 8.2 Muscle Muscle - Skeletal 0011907 1023 706 BP-23696 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-0726-SM-2XCFJ 1 C1 2 pieces ~8x5mm, good clean specimens 7.3 Thyroid Thyroid 0002046 1040 690 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.972849 214517 0.963777 0.976048 0.752055 25702 1 76 0.00242027 211 0 1.14902e+08 0.035877 397236 1.17722e+08 1.27645e+07 25765 5.70369e+07 0 0.211721 0.976048 0.734042 1.14902e+08 0.00936058 2.50295e+07 1.07168e+07 2.51429e+07 243 2.52316e+07 1.75813e+07 0.00587906 2.52843e+07 50.0522 0.00337437 0.979247 0 50.1131 GTEX-SJXC-0726-SM-2XV6M 1 C1 2 pieces ~8x5mm, good clean specimens 7.3 Thyroid Thyroid 0002046 1040 690 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 GTEx_AffyBatch9_May12 06/01/2012 Affymetrix Expression EXCLUDE GTEX-SJXC-1026-SM-EYYVA 3 C1 2 pieces ~7x6mm. Diffuse severe congestion/edema, badly autolyzed 5.6 Lung Lung 0008952 1053 680 BP-23698 RNA isolation_PAXgene Tissue miRNA 04/02/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.956184 353351 0.959455 0.959721 0.685422 24047 1 76 0.0035945 134 0 7.41293e+07 0.0402231 515427 7.72405e+07 2.75707e+06 24086 3.67252e+07 0 0.274033 0.959721 0.657814 7.41293e+07 0.00511825 1.61737e+07 1.69292e+07 1.63266e+07 160 1.63501e+07 8.31296e+06 0.00435357 1.64021e+07 50.0794 0.00667302 0.963259 0 50.2352 GTEX-SJXC-1126-SM-4DM6Y 1 C1 6 pieces ~8x1.5mm, several with up to 0.4mm atheromatous plaque, encircled 5.7 Blood Vessel Artery - Aorta 0001496 1055 678 BP-23766 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-3205 07/23/2013 TruSeq.v1 EXCLUDE 0.983276 330746 0.96864 0.98572 0.721937 23784 1 76 0.00243802 137 0 7.55833e+07 0.0309416 296716 7.66783e+07 4.25595e+06 23817 3.75509e+07 0 0.246703 0.98572 0.711628 7.55833e+07 0.00348373 1.65605e+07 1.08933e+07 1.66425e+07 162 1.66864e+07 1.09301e+07 0.00295958 1.67032e+07 50.0252 0.00386962 0.988164 0 50.1234 GTEX-SJXC-1226-SM-4DM78 2 C1 2 pieces ~10x8mm. Moderate congestion, moderately autolyzed 6 Liver Liver 0001114 1060 675 BP-23766 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-3205 07/23/2013 TruSeq.v1 RNASEQ 0.98414 946986 0.941291 0.986919 0.792029 20774 1 76 0.00211186 183 0 7.4108e+07 0.0585758 1.09721e+06 7.50903e+07 4.34474e+06 20790 3.68295e+07 0 0.149262 0.986919 0.781668 7.4108e+07 0.0032625 1.56913e+07 3.31068e+07 1.58857e+07 207 1.5851e+07 8.31444e+06 0.00268556 1.59318e+07 50.127 0.0146119 0.989698 0 50.3078 GTEX-SJXC-1426-SM-EYYVB 3 C1 6 pieces ~6x1.5mm, squamous mucosa is badly autolyzed and sloughing 5.9 Esophagus Esophagus - Mucosa 0006920 1064 672 BP-23766 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985034 146766 0.97387 0.987268 0.795969 23231 1 76 0.00221958 202 0 8.09769e+07 0.0259293 657228 8.20211e+07 3.05245e+06 23254 4.02988e+07 0 0.177901 0.987268 0.785835 8.09769e+07 0.00307597 1.81285e+07 7.9602e+06 1.82964e+07 252 1.82715e+07 1.13447e+07 0.00264681 1.83261e+07 50.0747 0.00801291 0.989503 0 50.2306 GTEX-SJXC-1526-SM-EZ6L5 2 C1 6 pieces ~6x3mm 5.8 Esophagus Esophagus - Muscularis 0004648 1066 670 BP-23766 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985425 187242 0.970826 0.986894 0.799693 23612 1 76 0.00250138 269 0 9.44319e+07 0.0289732 1.8048e+06 9.5686e+07 6.99704e+06 23641 4.7054e+07 0 0.171133 0.986894 0.789212 9.44319e+07 0.00384327 2.05329e+07 8.42253e+06 2.06054e+07 310 2.0577e+07 1.2061e+07 0.00317133 2.06878e+07 50.1343 0.0188617 0.988363 0 50.0881 GTEX-SJXC-2026-SM-4DM6N 3 C1 2 pieces ~8x7mm. Pattern of glandular hyperplasia but mucosa severely autolyzed 5.8 Prostate Prostate 0002367 1088 652 BP-23768 RNA isolation_PAXgene Tissue miRNA 04/03/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.982089 218780 0.962651 0.983977 0.740504 23580 1 76 0.00238605 115 0 5.5097e+07 0.0370322 419536 5.59942e+07 4.12756e+06 23602 2.73978e+07 0 0.222147 0.983977 0.728639 5.5097e+07 0.00376803 1.21427e+07 7.37134e+06 1.21764e+07 126 1.21989e+07 7.7959e+06 0.00307571 1.22242e+07 50.0519 0.00749249 0.985865 0 50.0692 GTEX-SJXC-2226-SM-EVYAK 3 C1 6 pieces ~8x2mm, mucosa badly autolyzed 5.5 Colon Colon - Transverse 0001157 1092 650 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.986865 196617 0.971904 0.987315 0.818819 24116 1 76 0.00206353 206 0 8.43612e+07 0.0276145 949127 8.5445e+07 4.09817e+06 24140 4.20342e+07 0 0.153084 0.987315 0.808433 8.43612e+07 0.00303823 1.83839e+07 7.65649e+06 1.86088e+07 246 1.8508e+07 1.26771e+07 0.00255066 1.85294e+07 50.0289 0.011108 0.987765 0 50.3039 GTEX-SN8G-0001-SM-3NM8L C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 966 BP-25565 RNA isolation_Trizol Manual (Cell Pellet) 05/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991538 723471 0.966633 0.993375 0.778407 22193 1 76 0.00391339 222 0 1.11023e+08 0.0329268 759419 1.11764e+08 2.07417e+07 22240 5.52503e+07 0 0.188226 0.993375 0.773251 1.11023e+08 0.00473149 2.46038e+07 2.13935e+07 2.45448e+07 245 2.46304e+07 2.43266e+07 0.00432169 2.47187e+07 50.0895 0.00679487 0.995212 0 49.94 GTEX-SN8G-0002-SM-325AH C1 Blood Whole Blood 0013756 966 BP-22838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003157_R03C01 GTEX-SN8G-0002-SM-325HX C1 Blood Whole Blood 0013756 966 BP-22838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R01C02 GTEX-SN8G-0002-SM-4SVRA C1 Blood Whole Blood 0013756 966 BP-22838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SN8G-0002-SM-5JK4B C1 Blood Whole Blood 0013756 966 BP-22838 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/02/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-SN8G-0006-SM-32PLD C1 8.2 Blood Whole Blood 0013756 966 BP-22831 RNA isolation_PAXgene Blood RNA (Manual) 03/02/2012 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.912999 175293 0.986151 0.917455 0.815197 19696 1 76 0.00285563 130 0 8.90229e+07 0.0125212 270037 9.70324e+07 1.08152e+07 19707 4.41157e+07 0 0.170955 0.917455 0.747906 8.90229e+07 0.0080825 2.03971e+07 7.98754e+07 2.07642e+07 149 2.08587e+07 2.07626e+07 0.00545638 2.07396e+07 49.8569 0.00278296 0.921911 0 50.4459 GTEX-SN8G-0008-SM-4DM4X C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 1035 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990416 643953 0.968355 0.992656 0.828712 21246 1 76 0.00199831 199 0 7.83064e+07 0.0312303 252330 7.88858e+07 5.87968e+06 21265 3.89586e+07 0 0.139642 0.992656 0.822627 7.83064e+07 0.00325088 1.73038e+07 1.29623e+07 1.73841e+07 190 1.74899e+07 1.63837e+07 0.00262318 1.73593e+07 49.8125 0.00319868 0.994896 0 50.1158 GTEX-SN8G-0126-SM-32PLI 1 C1 6 pieces, ~7x2mm. Squamous epithelium is ~2-3% thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1034 1043 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.859128 93329 0.973525 0.863506 0.79132 21449 1 76 0.00253964 152 0 4.74233e+07 0.0262188 172924 5.49195e+07 4.84197e+06 21461 2.35187e+07 0 0.182204 0.863506 0.68331 4.74233e+07 0.00803994 1.03352e+07 6.49615e+06 1.04193e+07 118 1.05156e+07 8.74904e+06 0.00527585 1.04704e+07 49.8925 0.00314868 0.867884 0 50.2026 GTEX-SN8G-0226-SM-4DM6B 1 C1 2 pieces, ~7x6mm 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 1038 1040 BP-23794 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.985131 343766 0.968638 0.987393 0.78563 22480 1 76 0.00234228 139 0 6.33766e+07 0.0310563 204411 6.41858e+07 4.85488e+06 22506 3.15049e+07 0 0.183008 0.987393 0.775726 6.33766e+07 0.00372506 1.38284e+07 8.35775e+06 1.38747e+07 150 1.39131e+07 1.04092e+07 0.00303208 1.39381e+07 50.0449 0.00318468 0.989656 0 50.0835 GTEX-SN8G-0326-SM-32PLG 1 C1 2 pieces, ~10x5mm. Interstitial fat is ~15% of specimens 8 Muscle Muscle - Skeletal 0011907 1040 1039 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.867848 153471 0.978567 0.871918 0.850268 22218 1 76 0.00224598 374 0 1.22247e+08 0.02121 887922 1.40205e+08 1.49437e+07 22239 6.06743e+07 0 0.1283 0.871918 0.741364 1.22247e+08 0.00700658 2.62841e+07 1.17558e+07 2.65029e+07 349 2.65693e+07 2.29107e+07 0.00461517 2.67352e+07 50.1557 0.00633304 0.875989 0 50.2072 GTEX-SN8G-0426-SM-32PLF 1 C1 2 pieces ~4mm d. Discontinuous rim of fat around both, ~0.2-3mm 6.1 Nerve Nerve - Tibial 0001323 1042 1037 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.274082 52432 0.959832 0.276107 0.692042 21628 1 76 0.00270384 142 0 3.19782e+07 0.039349 133607 1.15818e+08 1.55902e+07 21655 1.56003e+07 0 0.26779 0.276107 0.191078 3.19782e+07 0.00919846 6.8935e+06 3.45273e+06 7.00664e+06 142 7.07822e+06 4.17177e+06 0.00592733 7.04768e+06 49.8919 0.00115359 0.278132 0 50.407 GTEX-SN8G-0526-SM-32PLE 1 C1 2 pieces, ~2mm d. Good clean specimens 6.9 Blood Vessel Artery - Tibial 0007610 1043 1037 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-1665 09/12/2012 TruSeq.v1 RNASEQ 0.97477 204136 0.968832 0.978359 0.764522 23793 1 76 0.00242802 353 0 1.33495e+08 0.0308025 407396 1.36448e+08 1.26068e+07 23840 6.62373e+07 0 0.20431 0.978359 0.747977 1.33495e+08 0.00688358 2.87193e+07 1.03609e+07 2.88953e+07 341 2.89628e+07 2.08477e+07 0.00464763 2.91118e+07 50.1282 0.00298573 0.981948 0 50.1527 GTEX-SN8G-0926-SM-4DM5I 2 C1 2 pieces, ~7x5mm. Minimal congestion 5.8 Lung Lung 0008952 1080 1004 BP-23794 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.982827 242319 0.972843 0.985319 0.808244 22269 1 76 0.00234604 121 0 5.46415e+07 0.0266836 173595 5.54556e+07 3.91134e+06 22288 2.71525e+07 0 0.164599 0.985319 0.796378 5.46415e+07 0.00367005 1.19665e+07 7.95164e+06 1.20439e+07 128 1.20598e+07 9.89937e+06 0.00300637 1.20893e+07 50.061 0.00313034 0.987811 0 50.1612 GTEX-SN8G-1526-SM-4DM79 1 C1 2 pieces, ~7x6mm 5.9 Thyroid Thyroid 0002046 1095 999 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986855 306013 0.959836 0.988673 0.748125 24321 1 76 0.00232329 144 0 7.28837e+07 0.0398537 124829 7.37186e+07 5.30436e+06 24353 3.62552e+07 0 0.211712 0.988673 0.739651 7.28837e+07 0.0035281 1.57944e+07 1.08826e+07 1.58278e+07 156 1.58618e+07 1.20219e+07 0.00292459 1.58943e+07 50.0512 0.00169332 0.990492 0 50.0528 GTEX-SN8G-2426-SM-EVR31 1 C1 2 pieces ~8x8mm. One aliquot with marked congestion approaching hemorrhagic infarction 5.5 Ovary Ovary 0000992 1118 995 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.987039 248545 0.972945 0.989029 0.78908 23254 1 76 0.00214763 227 0 9.5334e+07 0.0267979 360558 9.63916e+07 7.06219e+06 23291 4.74441e+07 0 0.183865 0.989029 0.780423 9.5334e+07 0.00354844 2.07622e+07 1.13069e+07 2.10573e+07 226 2.10022e+07 1.97328e+07 0.00284663 2.10032e+07 50.0012 0.00374056 0.991018 0 50.3528 GTEX-SN8G-2626-SM-EXUQT 2 C1 6 pieces ~9x3mm. Squamous mucosa nearly completely sloughed 5.5 Vagina Vagina 0000996 1122 992 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.973776 184420 0.9697 0.974213 0.725738 22812 1 76 0.0019873 129 0 5.47086e+07 0.0300195 333276 5.61567e+07 2.18909e+06 22829 2.72351e+07 0 0.243961 0.974213 0.707023 5.47086e+07 0.00258769 1.20699e+07 6.43429e+06 1.22447e+07 128 1.21891e+07 8.40766e+06 0.00228736 1.21563e+07 49.9325 0.00593475 0.97465 0 50.3594 GTEX-SNMC-0004-SM-2XJZO B1 Blood Whole Blood 0013756 -175 BP-22878 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/05/2012 GTEx_96Exome_May12 06/06/2012 Illumina Human Exome SNP Array EXCLUDE 7983311048_R03C02 GTEX-SNMC-0004-SM-3259Z B1 Blood Whole Blood 0013756 -175 BP-22878 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/05/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003131_R01C01 GTEX-SNMC-0004-SM-325HH B1 Blood Whole Blood 0013756 -175 BP-22878 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/05/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R05C01 GTEX-SNMC-0004-SM-4X61G B1 Blood Whole Blood 0013756 -175 BP-22878 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/05/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SNMC-0004-SM-5JK4Q B1 Blood Whole Blood 0013756 -175 BP-22878 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/05/2012 LCSET-5036,LCSET-7900 10/03/2015 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-SNMC-0006-SM-2XCFE B1 9.1 Blood Whole Blood 0013756 -175 BP-22912 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.387274 229740 0.939797 0.390617 0.738506 19935 1 76 0.00292038 135 0 4.41392e+07 0.0595802 138725 1.12998e+08 1.62792e+07 19945 2.16063e+07 0 0.201291 0.390617 0.288473 4.41392e+07 0.0114238 9.22905e+06 1.03759e+07 9.36796e+06 147 9.5584e+06 6.8737e+06 0.00713568 9.39458e+06 49.5678 0.00122767 0.39396 0 50.3735 GTEX-SNMC-0006-SM-2XV4M B1 9.1 Blood Whole Blood 0013756 -175 BP-22912 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SNMC-0008-SM-4DM5A B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 277 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990113 510048 0.963619 0.992317 0.831509 20331 1 76 0.00190526 157 0 6.84111e+07 0.0360189 212277 6.89408e+07 4.92538e+06 20348 3.40485e+07 0 0.13211 0.992317 0.825121 6.84111e+07 0.00314046 1.50961e+07 1.43765e+07 1.51526e+07 159 1.52268e+07 1.40082e+07 0.00252149 1.51642e+07 49.897 0.00307912 0.994521 0 50.0935 GTEX-SNMC-0126-SM-2XCFO 0 B1 2 pieces 8x7 & 8x6 mm; contraction bands (hypoxia) no scars or infarcts; no adipose 8.9 Heart Heart - Left Ventricle 0006566 185 1084 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.463975 81409 0.981627 0.467011 0.872244 19748 1 76 0.00209481 115 0 4.61326e+07 0.0178115 1.13049e+06 9.87826e+07 1.28967e+07 19754 2.26851e+07 0 0.109383 0.467011 0.407348 4.61326e+07 0.0104181 1.01135e+07 4.5186e+06 1.01878e+07 134 1.01826e+07 7.05877e+06 0.00622941 1.03726e+07 50.4622 0.0114442 0.470048 0 50.1829 GTEX-SNMC-0126-SM-2XV6G 0 B1 2 pieces 8x7 & 8x6 mm; contraction bands (hypoxia) no scars or infarcts; no adipose 8.9 Heart Heart - Left Ventricle 0006566 185 1084 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SNMC-0226-SM-4DM6F 0 B1 2 pieces 4x2 & 3x2 mm; larger has 50% adherent adipose; smaller has <10% adipose; minimal plaque 8.5 Blood Vessel Artery - Coronary 0001621 187 1083 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989392 317375 0.971083 0.991481 0.832286 20935 1 76 0.00196954 119 0 5.45394e+07 0.028593 200996 5.5008e+07 3.8127e+06 20947 2.71369e+07 0 0.138797 0.991481 0.825196 5.45394e+07 0.00344542 1.17415e+07 4.94264e+06 1.17552e+07 130 1.17405e+07 1.0259e+07 0.00270593 1.18706e+07 50.2756 0.00365394 0.99357 0 50.0292 GTEX-SNMC-0426-SM-4DM5Y 0 B1 6 pieces up to 5x4 mm; clean no adipose or submucosa 8.3 Esophagus Esophagus - Muscularis 0004648 213 1058 BP-23791 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990551 391719 0.974321 0.992468 0.843374 21755 1 76 0.0019516 168 0 7.73257e+07 0.0253984 531569 7.79126e+07 5.52633e+06 21772 3.84925e+07 0 0.130946 0.992468 0.837022 7.73257e+07 0.003265 1.66278e+07 7.60014e+06 1.66508e+07 196 1.66187e+07 1.39739e+07 0.00260703 1.68019e+07 50.2741 0.00682263 0.994385 0 50.0344 GTEX-SNMC-0426-SM-DMRPY 0 B1 6 pieces up to 5x4 mm; clean no adipose or submucosa Esophagus Esophagus - Muscularis 0004648 213 1058 BP-23792 DNA Isolation from Tissue via QIAgen Spin Column 04/04/2012 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-SNMC-0526-SM-4DM69 0 B1 6 pieces up to 7x2 mm; all with good squamous mucosa 8.7 Esophagus Esophagus - Mucosa 0006920 213 1058 BP-23794 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990179 351797 0.976002 0.992082 0.847283 21653 1 76 0.001976 160 0 7.29595e+07 0.0237051 419275 7.35418e+07 4.96284e+06 21669 3.63176e+07 0 0.128719 0.992082 0.840575 7.29595e+07 0.00340458 1.64129e+07 1.03714e+07 1.64421e+07 172 1.64587e+07 1.48224e+07 0.00268892 1.65362e+07 50.1175 0.00570118 0.993986 0 50.0444 GTEX-SNMC-0626-SM-4DM6H 1 B1 6 pieces up to 9x4 mm; all with well preserved mucosa; gastric gland dilatation. 7.6 Stomach Stomach 0000945 215 1057 BP-23794 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98409 422446 0.974126 0.986771 0.847696 21387 1 76 0.00208158 245 0 6.12029e+07 0.0255217 443615 6.20234e+07 4.57043e+06 21399 3.04128e+07 0 0.12643 0.986771 0.836482 6.12029e+07 0.00350757 1.3981e+07 6.1933e+07 1.40773e+07 171 1.41329e+07 1.56782e+07 0.00279264 1.4097e+07 49.9363 0.00715238 0.989452 0 50.1717 GTEX-SNMC-0826-SM-4DM66 2 B1 6 pieces up to 8x4 mm; mucosa is variably preserved: some areas well and some sloughed 8.6 Bladder Bladder 0001255 230 1045 BP-23794 RNA isolation_PAXgene Tissue miRNA 04/04/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988295 293534 0.967582 0.990607 0.763716 23092 1 76 0.00208335 110 0 5.17735e+07 0.0321327 235558 5.22644e+07 3.63722e+06 23118 2.57604e+07 0 0.203866 0.990607 0.756543 5.17735e+07 0.00345301 1.1429e+07 6.11536e+06 1.1465e+07 112 1.15072e+07 9.0544e+06 0.00276658 1.15029e+07 49.9907 0.00450704 0.992919 0 50.0785 GTEX-SNMC-0926-SM-4DM5U 1 B1 2 pieces 8x8 & 7x7 mm; well preserved glands 7.1 Prostate Prostate 0002367 235 1041 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986278 338717 0.959387 0.989004 0.775676 22757 1 76 0.00216404 113 0 5.14845e+07 0.040249 275015 5.20569e+07 3.65134e+06 22774 2.55865e+07 0 0.183711 0.989004 0.767147 5.14845e+07 0.00356561 1.13015e+07 9.31732e+06 1.13435e+07 127 1.13721e+07 7.06962e+06 0.00286289 1.14123e+07 50.0882 0.00528297 0.991731 0 50.0927 GTEX-SNMC-1026-SM-4DM7K 1 B1 2 pieces 8x6 & 7x5 mm; spermatogenesis throughout 7.3 Testis Testis 0000473 236 1041 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989008 437011 0.923061 0.990723 0.718706 32197 1 76 0.00212801 131 0 6.44578e+07 0.0766537 462881 6.50613e+07 4.38668e+06 32241 3.2082e+07 0 0.204355 0.990723 0.712039 6.44578e+07 0.00342108 1.34167e+07 9.19791e+06 1.34115e+07 132 1.34602e+07 1.01517e+07 0.00277342 1.34705e+07 50.0191 0.00711453 0.992439 0 49.9903 GTEX-SNMC-1126-SM-4DM5M 1 B1 6 pieces up to 8x4 mm; well preserved mucosa; well visualized ganglion cells 7.8 Colon Colon - Transverse 0001157 253 1025 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988446 346992 0.97324 0.990457 0.837767 22837 1 76 0.00195442 154 0 6.64442e+07 0.0265137 646917 6.70844e+07 4.70397e+06 22853 3.30667e+07 0 0.135473 0.990457 0.829773 6.64442e+07 0.00335848 1.45294e+07 6.8622e+06 1.45586e+07 169 1.45387e+07 1.0828e+07 0.00265502 1.46747e+07 50.2327 0.00964333 0.992468 0 50.0502 GTEX-SNMC-1226-SM-2XCFP 1 B1 6 pieces up to 7x4 mm; thin remnant of subcutaneous fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 269 1009 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.754129 172706 0.974187 0.761364 0.767645 23754 1 76 0.00237411 188 0 8.15399e+07 0.0255898 704113 1.07097e+08 1.4117e+07 23788 4.02209e+07 0 0.206542 0.761364 0.584457 8.15399e+07 0.0102501 1.75429e+07 8.95912e+06 1.76218e+07 177 1.79411e+07 1.18361e+07 0.00627466 1.79434e+07 50.0032 0.00657452 0.768599 0 50.1122 GTEX-SNMC-1226-SM-2XV54 1 B1 6 pieces up to 7x4 mm; thin remnant of subcutaneous fat 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 269 1009 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SNMC-1326-SM-2XCFK 1 B1 2 pieces 9x8 & 9x7 mm; central holes (unfixed); ~10% fibrous stroma 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 273 1007 BP-23820 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.918653 159731 0.975713 0.922819 0.806849 24068 1 76 0.00234433 276 0 1.24826e+08 0.0239752 897098 1.35266e+08 1.66585e+07 24122 6.189e+07 0 0.168864 0.922819 0.744576 1.24826e+08 0.00967184 2.75844e+07 1.01026e+07 2.76058e+07 312 2.77627e+07 1.87506e+07 0.00599154 2.79457e+07 50.1643 0.0066321 0.926985 0 50.0194 GTEX-SNMC-1426-SM-2XCFM 1 B1 2 pieces 10x7 & 8x6 mm; minimal adipose 7.9 Muscle Muscle - Skeletal 0011907 274 1007 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.952663 142601 0.979402 0.956494 0.858383 21612 1 76 0.00216941 236 0 1.11372e+08 0.0203814 1.70031e+06 1.16438e+08 1.34604e+07 21639 5.52947e+07 0 0.121019 0.956494 0.821038 1.11372e+08 0.00945646 2.44868e+07 9.35605e+06 2.42872e+07 266 2.44176e+07 2.0444e+07 0.00579834 2.47575e+07 50.3456 0.0146027 0.960326 0 49.7953 GTEX-SNMC-1426-SM-2XV6L 1 B1 2 pieces 10x7 & 8x6 mm; minimal adipose 7.9 Muscle Muscle - Skeletal 0011907 274 1007 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SNMC-1526-SM-2XCFN 0 B1 2 pieces 5x2 & 3x2 mm; larger with an artery and vein; other with artery. clean, no adherent adipose, no lesions 7.9 Blood Vessel Artery - Tibial 0007610 282 999 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-1562 09/11/2012 TruSeq.v1 RNASEQ 0.977387 186969 0.972563 0.981045 0.805011 22578 1 76 0.00235281 213 0 1.12533e+08 0.0270582 409829 1.14707e+08 1.2359e+07 22611 5.58431e+07 0 0.167552 0.981045 0.789752 1.12533e+08 0.00948415 2.40554e+07 6.99669e+06 2.42362e+07 252 2.42801e+07 1.87659e+07 0.00590518 2.43919e+07 50.1149 0.00357283 0.984703 0 50.1872 GTEX-SNMC-1526-SM-2XV4X 0 B1 2 pieces 5x2 & 3x2 mm; larger with an artery and vein; other with artery. clean, no adherent adipose, no lesions 7.9 Blood Vessel Artery - Tibial 0007610 282 999 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 GTEx_AffyBatch9_May12 05/31/2012 Affymetrix Expression EXCLUDE GTEX-SNMC-1626-SM-4DM52 0 B1 2 pieces 5x3 & 2x2 mm; minimal adipose 5.7 Nerve Nerve - Tibial 0001323 284 998 BP-23823 RNA isolation_PAXgene Tissue miRNA 04/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.983208 693740 0.961212 0.985542 0.774889 23224 1 76 0.00221464 144 0 6.47113e+07 0.0385625 268919 6.56606e+07 4.70722e+06 23246 3.21434e+07 0 0.186322 0.985542 0.763686 6.47113e+07 0.00367522 1.40634e+07 8.21115e+06 1.41834e+07 156 1.41916e+07 9.43954e+06 0.0029432 1.42044e+07 50.0226 0.00409559 0.987875 0 50.2124 GTEX-SNOS-0003-SM-3NMAO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -1226 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991054 1.053e+06 0.966682 0.993351 0.824179 22107 1 76 0.00378373 222 0 1.11307e+08 0.0327562 902217 1.12052e+08 2.1154e+07 22136 5.53687e+07 0 0.142503 0.993351 0.818699 1.11307e+08 0.00497615 2.45942e+07 2.24603e+07 2.47436e+07 246 2.48403e+07 2.62622e+07 0.00437856 2.47557e+07 49.9147 0.00805174 0.995648 0 50.1514 GTEX-SNOS-0004-SM-325AE B1 Blood Whole Blood 0013756 -1226 BP-22897 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/06/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003157_R02C01 GTEX-SNOS-0004-SM-325HU B1 Blood Whole Blood 0013756 -1226 BP-22897 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/06/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R06C01 GTEX-SNOS-0004-SM-4X61S B1 Blood Whole Blood 0013756 -1226 BP-22897 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/06/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-SNOS-0004-SM-5SOEL B1 Blood Whole Blood 0013756 -1226 BP-22897 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/06/2012 LCSET-5226,LCSET-5435 07/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-SNOS-0006-SM-32PLH B1 9.1 Blood Whole Blood 0013756 -1226 BP-22912 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.733611 587239 0.95835 0.733858 0.804366 19150 1 76 0.00243302 119 0 7.26628e+07 0.0413618 240186 9.90149e+07 1.00818e+07 19160 3.60191e+07 0 0.153985 0.733858 0.59029 7.26628e+07 0.0078346 1.57948e+07 3.05782e+07 1.59915e+07 137 1.59732e+07 1.51742e+07 0.0051329 1.5836e+07 49.7843 0.00242576 0.734105 0 50.3094 GTEX-SNOS-0008-SM-4DM6I B1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 191 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990702 729166 0.963903 0.992601 0.833148 20698 1 76 0.00188983 154 0 7.34854e+07 0.0357464 237492 7.40332e+07 5.27089e+06 20712 3.65748e+07 0 0.130756 0.992601 0.826983 7.34854e+07 0.00311721 1.61885e+07 1.74121e+07 1.6278e+07 163 1.63492e+07 1.59003e+07 0.00250235 1.62544e+07 49.8547 0.00320791 0.994501 0 50.1379 GTEX-SNOS-0226-SM-32PLR 1 B1 2 pieces 11x6 & 9x4 mm; focus of blood vessels at edge of one aliquot 8.5 Thyroid Thyroid 0002046 110 1206 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.721462 101220 0.96421 0.729719 0.759623 21270 1 76 0.0023902 107 0 3.33068e+07 0.0355074 111236 4.56433e+07 4.68732e+06 21289 1.64105e+07 0 0.204587 0.729719 0.554311 3.33068e+07 0.00836526 7.19142e+06 4.89917e+06 7.27405e+06 107 7.44497e+06 5.97871e+06 0.00534392 7.3837e+06 49.7934 0.00243707 0.737976 0 50.2856 GTEX-SNOS-0326-SM-4DM6C 1 B1 6 pieces up to 9x4 mm; no adventitial adipose 7.6 Blood Vessel Artery - Aorta 0001496 118 1199 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.99007 440146 0.968534 0.991867 0.807907 21915 1 76 0.00205867 136 0 6.92358e+07 0.0311279 193867 6.98035e+07 4.73757e+06 21931 3.44595e+07 0 0.160627 0.991867 0.801337 6.92358e+07 0.00343307 1.4969e+07 8.98065e+06 1.49899e+07 156 1.50074e+07 1.25929e+07 0.00274462 1.50765e+07 50.1148 0.00277732 0.993664 0 50.0349 GTEX-SNOS-0426-SM-32PMH 1 B1 2 pieces 12x8 & 7x5 mm; patchy atelectasis 8.7 Lung Lung 0008952 128 1189 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.961977 174998 0.974739 0.964971 0.823579 22923 1 76 0.00240183 125 0 6.64249e+07 0.0247538 356797 6.88362e+07 6.48336e+06 22939 3.30169e+07 0 0.151161 0.964971 0.79473 6.64249e+07 0.00740952 1.47163e+07 7.879e+06 1.48649e+07 140 1.49318e+07 1.30197e+07 0.0048979 1.48464e+07 49.8566 0.00518328 0.967966 0 50.2512 GTEX-SNOS-0526-SM-4DM54 1 B1 6 pieces up to 10x5 mm; mucosa not in sections 9 Bladder Bladder 0001255 143 1175 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989018 367455 0.964679 0.991335 0.770081 23033 1 76 0.00225588 116 0 5.21386e+07 0.0345398 276270 5.25943e+07 3.64572e+06 23060 2.5919e+07 0 0.194597 0.991335 0.763409 5.21386e+07 0.00359392 1.15153e+07 8.08736e+06 1.15371e+07 118 1.15772e+07 8.78944e+06 0.00292334 1.15962e+07 50.0409 0.00525285 0.993652 0 50.0473 GTEX-SNOS-0626-SM-4DM5F 1 B1 6 pieces up to 7x4 mm; mild chronic esophagitis with erosions 9 Esophagus Esophagus - Mucosa 0006920 145 1174 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.984994 408458 0.972817 0.988083 0.824963 22417 1 76 0.00228565 141 0 6.20682e+07 0.0264793 407319 6.28168e+07 4.65719e+06 22435 3.08348e+07 0 0.147854 0.988083 0.815132 6.20682e+07 0.00377459 1.391e+07 9.58526e+06 1.39521e+07 144 1.40048e+07 1.18778e+07 0.00302779 1.40484e+07 50.0777 0.00648424 0.991173 0 50.0757 GTEX-SNOS-0726-SM-4DM5Z 1 B1 6 pieces up to 8x4 mm; 7.9 Esophagus Esophagus - Muscularis 0004648 148 1172 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.985644 360949 0.972375 0.988982 0.825963 22156 1 76 0.00204653 140 0 6.282e+07 0.0273837 533669 6.35199e+07 4.80999e+06 22168 3.12095e+07 0 0.146411 0.988982 0.816863 6.282e+07 0.00354168 1.35994e+07 6.69281e+06 1.36854e+07 154 1.36999e+07 1.06639e+07 0.00279158 1.37869e+07 50.1583 0.00840161 0.992319 0 50.1576 GTEX-SNOS-0826-SM-4DM5N 0 B1 6 pieces up to 8x5 mm; very good mucosal preservation 7.6 Stomach Stomach 0000945 153 1168 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98445 425772 0.974935 0.987283 0.835306 23263 1 76 0.00233483 268 0 8.14638e+07 0.0242964 740247 8.25131e+07 5.99801e+06 23285 4.04738e+07 0 0.139629 0.987283 0.824684 8.14638e+07 0.00385279 1.83988e+07 4.3046e+07 1.8464e+07 217 1.85375e+07 1.75339e+07 0.00309164 1.85549e+07 50.0234 0.00897127 0.990115 0 50.0884 GTEX-SNOS-0926-SM-4DM7A 0 B1 2 pieces 10x9 & 10x2 mm; <10& peripheral adipose; good preservation 7 Pancreas Pancreas 0001150 155 1167 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987956 448184 0.976416 0.990867 0.84863 21359 1 76 0.00227156 109 0 7.45565e+07 0.0233074 218486 7.52437e+07 5.63979e+06 21377 3.70472e+07 0 0.127787 0.990867 0.840879 7.45565e+07 0.00379439 1.70962e+07 1.97699e+07 1.7263e+07 121 1.7296e+07 2.12712e+07 0.00303074 1.72879e+07 49.9884 0.00290371 0.993777 0 50.2427 GTEX-SNOS-1026-SM-4DM4Y 1 B1 2 pieces 10x7 & 8x8 mm; mostly fibromuscular hyperplasia; a few glands in one aliquot 8 Prostate Prostate 0002367 163 1159 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989745 345411 0.967146 0.991658 0.756171 23548 1 76 0.002176 114 0 5.64546e+07 0.0324256 251540 5.69296e+07 3.93043e+06 23580 2.80766e+07 0 0.210974 0.991658 0.749863 5.64546e+07 0.00351001 1.23688e+07 6.10438e+06 1.24307e+07 128 1.24493e+07 8.70615e+06 0.00284172 1.2459e+07 50.0195 0.00441844 0.99357 0 50.1248 GTEX-SNOS-1126-SM-4DM67 1 B1 2 pieces 10x8 & 10x8 mm; slight decrease iin spermatogenesis 7.1 Testis Testis 0000473 167 1156 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988626 523499 0.924949 0.990534 0.725133 32401 1 76 0.00216424 139 0 6.78878e+07 0.0747096 596083 6.85366e+07 4.68185e+06 32455 3.37772e+07 0 0.199816 0.990534 0.718269 6.78878e+07 0.00347363 1.41109e+07 1.04904e+07 1.40893e+07 137 1.4155e+07 1.133e+07 0.00281767 1.41656e+07 50.0186 0.0086973 0.992441 0 49.9617 GTEX-SNOS-1226-SM-4DM5H 1 B1 6 pieces up to 7x3 mm; good mucosal preservation 5.8 Colon Colon - Transverse 0001157 178 1146 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986432 531661 0.960425 0.98837 0.828511 22454 1 76 0.00237877 139 0 6.19438e+07 0.0383163 1.02053e+06 6.26727e+07 4.26237e+06 22473 3.07803e+07 0 0.131915 0.98837 0.818875 6.19438e+07 0.00378104 1.35817e+07 1.60461e+07 1.36776e+07 164 1.36355e+07 8.94296e+06 0.00307853 1.37433e+07 50.1969 0.0162835 0.990308 0 50.1759 GTEX-SNOS-1426-SM-32PLY 1 B1 2 pieces 12x9 & 11x10 mm; large central unfixed empty zones 40-50% of aliquots 7 Adipose Tissue Adipose - Subcutaneous 0002190 195 1130 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.981918 337359 0.973133 0.984713 0.832636 24457 1 76 0.00226312 378 0 1.21995e+08 0.0265606 541198 1.23888e+08 1.05579e+07 24495 6.0624e+07 0 0.140497 0.984713 0.819907 1.21995e+08 0.00736693 2.68044e+07 1.66496e+07 2.70293e+07 360 2.71148e+07 2.25017e+07 0.00480778 2.70554e+07 49.9451 0.00436843 0.987508 0 50.2089 GTEX-SNOS-1526-SM-32PLW 0 B1 2 pieces 9x7 & 7x7 mm; larger has ~10% adipose between muscle bundles 8.4 Muscle Muscle - Skeletal 0011907 201 1125 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.855465 91691 0.982632 0.858656 0.880927 18889 1 76 0.00207009 135 0 6.06179e+07 0.0171397 1.02906e+06 7.05963e+07 6.36982e+06 18895 3.01157e+07 0 0.101704 0.858656 0.756414 6.06179e+07 0.00768001 1.32619e+07 6.61406e+06 1.34564e+07 143 1.35158e+07 1.22123e+07 0.00486463 1.34083e+07 49.8003 0.0145767 0.861846 0 50.364 GTEX-SNOS-1626-SM-3NMA4 0 B1 2 pieces 5x3 & 4x3 mm; <10% peripheral adipose 7.7 Nerve Nerve - Tibial 0001323 248 1079 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988407 414100 0.969245 0.991408 0.763032 24653 1 76 0.00389545 210 0 9.74176e+07 0.030503 261309 9.82619e+07 2.05478e+07 24695 4.84124e+07 0 0.206213 0.991408 0.756476 9.74176e+07 0.00523302 2.13988e+07 1.1797e+07 2.14952e+07 214 2.15578e+07 1.5645e+07 0.00456221 2.16218e+07 50.0741 0.00265931 0.994409 0 50.1124 GTEX-SNOS-1726-SM-32PLN 0 B1 2 pieces ,2 mm artery; a few punctate calcium deposits in intima; clean, no adipose 8.2 Blood Vessel Artery - Tibial 0007610 249 1078 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.963429 147549 0.974654 0.966055 0.818648 22613 1 76 0.0022845 270 0 1.09996e+08 0.0249712 383527 1.13861e+08 9.54461e+06 22647 5.46753e+07 0 0.156006 0.966055 0.790859 1.09996e+08 0.00725983 2.38125e+07 7.92838e+06 2.39841e+07 264 2.40187e+07 2.03514e+07 0.0047654 2.40573e+07 50.0402 0.00336839 0.968682 0 50.1794 GTEX-SSA3-0001-SM-325A5 B1 Blood Whole Blood 0013756 -1114 BP-23011 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/12/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003067_R03C01 GTEX-SSA3-0001-SM-325HL B1 Blood Whole Blood 0013756 -1114 BP-23011 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/12/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R03C01 GTEX-SSA3-0001-SM-3USRH B1 Blood Whole Blood 0013756 -1114 BP-23011 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/12/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-SSA3-0001-SM-5URCI B1 Blood Whole Blood 0013756 -1114 BP-23011 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/12/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-SSA3-0002-SM-3P61R B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -1114 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951177 998428 0.960331 0.972498 0.79233 22727 1 76 0.00379658 225 0 1.07645e+08 0.038827 379463 1.10689e+08 1.44549e+07 22770 5.24924e+07 0 0.168001 0.972498 0.77054 1.07645e+08 0.00501233 2.32065e+07 2.12774e+07 2.33255e+07 252 2.43926e+07 2.42182e+07 0.00439113 2.42423e+07 49.8455 0.00342819 0.993819 0 50.1279 GTEX-SSA3-0005-SM-32QOT B1 8.9 Blood Whole Blood 0013756 -1114 BP-23111 RNA isolation_PAXgene Blood RNA (Manual) 03/14/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.959754 674808 0.964313 0.964577 0.778297 21074 1 76 0.00296263 134 0 1.06872e+08 0.0344924 178541 1.10797e+08 1.55222e+07 21092 5.29825e+07 0 0.186016 0.964577 0.750728 1.06872e+08 0.00950087 2.40476e+07 1.17588e+08 2.4452e+07 155 2.45728e+07 2.34577e+07 0.0062154 2.44631e+07 49.8881 0.00161142 0.969401 0 50.417 GTEX-SSA3-0008-SM-47JWJ B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 35 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.991189 447191 0.974822 0.993712 0.847427 20640 1 76 0.00231815 165 0 7.1705e+07 0.0247709 148172 7.21588e+07 7.61602e+06 20657 3.56704e+07 0 0.127395 0.993712 0.842098 7.1705e+07 0.00257883 1.60537e+07 9.09566e+06 1.60266e+07 159 1.61121e+07 1.6351e+07 0.00244816 1.61404e+07 50.0439 0.00205342 0.996234 0 49.9578 GTEX-SSA3-0126-SM-32QPU 0 B1 5 pieces + one fragment, ~8x2mm. Squamous epithelium is ~2-3% of thickness. 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 40 1310 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.836207 119427 0.965896 0.845248 0.783047 25079 1 76 0.00269846 162 0 8.38961e+07 0.0338729 611627 9.92562e+07 1.708e+07 25113 4.13603e+07 0 0.182849 0.845248 0.661869 8.38961e+07 0.00828826 1.81231e+07 9.5791e+06 1.81027e+07 180 1.8425e+07 1.28413e+07 0.00546346 1.8649e+07 50.3021 0.0061621 0.854289 0 49.9719 GTEX-SSA3-0226-SM-32QPN 0 B1 2 pieces ~10 x 10mm. One with extreme separation but seems well preserved. 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 45 1305 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.826106 160975 0.974245 0.82887 0.8358 23252 1 76 0.00252492 189 0 9.44453e+07 0.0254108 507932 1.13945e+08 1.77574e+07 23279 4.6835e+07 0 0.138445 0.82887 0.692769 9.44453e+07 0.00793973 2.06665e+07 8.52128e+06 2.08744e+07 214 2.08899e+07 1.71344e+07 0.0052233 2.09433e+07 50.0638 0.0044577 0.831633 0 50.2502 GTEX-SSA3-0326-SM-32QPS 0 B1 2 pieces ~8x7mm. Prominent band of scarring/fibrosis encircled, largest confluent focus ~1.5x1mm in one aliquot, ~15 % of specimen 8.2 Muscle Muscle - Skeletal 0011907 55 1295 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.976586 126396 0.971851 0.980594 0.796251 22512 1 76 0.00243896 158 0 9.45732e+07 0.0278398 1.02226e+06 9.64448e+07 1.30593e+07 22550 4.69695e+07 0 0.1756 0.980594 0.780799 9.45732e+07 0.00787323 2.00111e+07 8.43953e+06 2.03085e+07 190 2.03232e+07 1.73497e+07 0.00514499 2.03391e+07 50.0195 0.0105994 0.984602 0 50.3687 GTEX-SSA3-0326-SM-47JWY 0 B1 2 pieces ~8x7mm. Prominent band of scarring/fibrosis encircled, largest confluent focus ~1.5x1mm in one aliquot, ~15 % of specimen 8.2 Muscle Muscle - Skeletal 0011907 55 1295 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-2974 04/11/2013 TruSeq.v1 EXCLUDE 0.989275 296191 0.974554 0.992405 0.818301 21531 1 76 0.00252721 126 0 7.15522e+07 0.0251839 706103 7.20998e+07 7.89766e+06 21554 3.55686e+07 0 0.156254 0.992405 0.812086 7.15522e+07 0.00317594 1.55287e+07 6.8841e+06 1.54111e+07 148 1.54569e+07 1.4138e+07 0.00285055 1.56948e+07 50.3818 0.00979341 0.995535 0 49.81 GTEX-SSA3-0426-SM-32QPI 0 B1 2 pieces ~4mm d. Rim of fibrous tissue 0.5 --1mm around larger aliquot 7.8 Blood Vessel Artery - Tibial 0007610 84 1266 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.97609 171078 0.974545 0.980011 0.819713 23730 1 76 0.00252389 176 0 9.80355e+07 0.0250795 308737 1.00035e+08 1.37419e+07 23761 4.86788e+07 0 0.154831 0.980011 0.803328 9.80355e+07 0.0080618 2.11152e+07 7.76147e+06 2.13148e+07 210 2.13537e+07 1.85247e+07 0.00528177 2.14472e+07 50.1092 0.00308629 0.983932 0 50.2352 GTEX-SSA3-0526-SM-32QPL 0 B1 2 pieces ~4.5mm d. Discontinuous rims of adherent fat around both ~0.5--1.5mm thick, representative foci encircled. 7 Nerve Nerve - Tibial 0001323 94 1256 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.972658 240867 0.966312 0.978023 0.784482 24775 1 76 0.00272498 182 0 9.17377e+07 0.0333527 240967 9.37991e+07 1.32675e+07 24818 4.54627e+07 0 0.181829 0.978023 0.767242 9.17377e+07 0.00921077 1.99827e+07 7.33252e+06 2.02039e+07 207 2.02671e+07 1.45038e+07 0.00595009 2.03936e+07 50.1556 0.00256897 0.983388 0 50.2752 GTEX-SUCS-0001-SM-325A7 B1 Blood Whole Blood 0013756 -196 BP-23160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003078_R03C01 GTEX-SUCS-0001-SM-325HM B1 Blood Whole Blood 0013756 -196 BP-23160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R05C02 GTEX-SUCS-0001-SM-3USRI B1 Blood Whole Blood 0013756 -196 BP-23160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-SUCS-0001-SM-5URDQ B1 Blood Whole Blood 0013756 -196 BP-23160 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/16/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-SUCS-0002-SM-3NMAJ B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -196 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991274 1.45356e+06 0.963019 0.993411 0.810093 23038 1 76 0.0040336 287 0 1.16932e+08 0.0361043 687898 1.17708e+08 2.28211e+07 23078 5.81564e+07 0 0.152927 0.993411 0.804755 1.16932e+08 0.00505347 2.58153e+07 2.01701e+07 2.58983e+07 269 2.60069e+07 2.724e+07 0.00454243 2.59574e+07 49.9524 0.00584411 0.995549 0 50.0802 GTEX-SUCS-0006-SM-4DM59 B1 9.6 Blood Whole Blood 0013756 -197 BP-23215 RNA isolation_PAXgene Blood RNA (Manual) 03/19/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988563 840990 0.948647 0.990577 0.798035 17169 1 76 0.00250452 114 0 6.74057e+07 0.0509529 251769 6.80469e+07 4.50013e+06 17177 3.35321e+07 0 0.150611 0.990577 0.790515 6.74057e+07 0.00399438 1.44394e+07 3.8463e+07 1.45557e+07 136 1.45824e+07 1.33376e+07 0.00324794 1.45598e+07 49.9612 0.00369993 0.99259 0 50.2006 GTEX-SUCS-0008-SM-4DM53 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.991094 609920 0.972265 0.993423 0.857803 19612 1 76 0.00179588 149 0 6.75943e+07 0.0274083 187490 6.80418e+07 5.0436e+06 19620 3.3629e+07 0 0.114462 0.993423 0.852162 6.75943e+07 0.00308595 1.5003e+07 1.3695e+07 1.51002e+07 145 1.51606e+07 1.7249e+07 0.0024394 1.51036e+07 49.9059 0.00275551 0.995752 0 50.1615 GTEX-SUCS-0226-SM-32PLQ 1 B1 2 pieces 9x5 & 7x4 mm; 7.2 Thyroid Thyroid 0002046 145 1188 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.833416 246923 0.957704 0.837945 0.737373 23947 1 76 0.00239353 119 0 6.35755e+07 0.04203 389302 7.58707e+07 7.2455e+06 23978 3.15139e+07 0 0.220331 0.837945 0.617878 6.35755e+07 0.00794517 1.37105e+07 1.14902e+07 1.38314e+07 127 1.39498e+07 9.93122e+06 0.00515434 1.39087e+07 49.9263 0.00513112 0.842474 0 50.2194 GTEX-SUCS-0326-SM-32PLL 1 B1 2 pieces 8x6 & 7x7 mm; contraction bands; no fibrosis or fat 8.9 Heart Heart - Left Ventricle 0006566 146 1188 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.947744 159403 0.981565 0.950327 0.859111 21043 1 76 0.00217574 150 0 8.37457e+07 0.0181285 954744 8.8123e+07 8.27056e+06 21055 4.16513e+07 0 0.122454 0.950327 0.816436 8.37457e+07 0.00733468 1.85171e+07 8.08771e+06 1.86323e+07 184 1.86308e+07 1.61564e+07 0.0047482 1.87167e+07 50.115 0.0108342 0.952911 0 50.155 GTEX-SUCS-0526-SM-4DM56 1 B1 2 pieces 8x6 & 7x7 mm; cortex; one has ~30% adipose 8.5 Adrenal Gland Adrenal Gland 0002369 156 1178 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989452 421982 0.970112 0.991834 0.84427 20922 1 76 0.00208262 117 0 5.32029e+07 0.0295798 961997 5.3641e+07 3.74977e+06 20937 2.64562e+07 0 0.125843 0.991834 0.837375 5.32029e+07 0.00344356 1.16974e+07 9.21710e+06 1.1748e+07 131 1.17592e+07 9.50737e+06 0.00276145 1.1809e+07 50.1057 0.017934 0.994217 0 50.1078 GTEX-SUCS-0626-SM-32PM5 1 B1 2 pieces 11x4 & 7x7 mm; patchy emphysema and fibrosis; no inflammation 7.5 Lung Lung 0008952 170 1165 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.955754 192063 0.97297 0.958843 0.810742 25536 1 76 0.00259512 277 0 1.1814e+08 0.0264796 933664 1.23211e+08 1.12346e+07 25572 5.86842e+07 0 0.162228 0.958843 0.777375 1.1814e+08 0.00800029 2.61746e+07 1.16793e+07 2.64063e+07 320 2.64543e+07 2.03104e+07 0.005289 2.64827e+07 50.0269 0.00757779 0.961933 0 50.2203 GTEX-SUCS-0726-SM-4DM7J 1 B1 6 pieces up to 7x4 mm; all have mucosa, no muscularis propria 9.4 Esophagus Esophagus - Mucosa 0006920 172 1163 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-3309 06/09/2013 TruSeq.v1 RNASEQ 0.983727 598716 0.958366 0.988385 0.799979 22345 1 76 0.0020535 139 0 7.31515e+07 0.0413471 347257 7.40111e+07 5.11327e+06 22362 3.6313e+07 0 0.158387 0.988385 0.790688 7.31515e+07 0.00298012 1.60841e+07 2.30327e+07 1.62538e+07 159 1.63819e+07 1.39882e+07 0.00251463 1.62903e+07 49.8599 0.00469196 0.993043 0 50.2623 GTEX-SUCS-0926-SM-4DM4Z 1 B1 6 pieces up to 6x4 mm; 3 have mainly mucosa, 1 largely muscle 6.4 Stomach Stomach 0000945 178 1158 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.979037 219981 0.976512 0.981527 0.873171 20403 1 76 0.0019515 245 0 5.31493e+07 0.0232861 1.17637e+06 5.41497e+07 3.79598e+06 20411 2.64191e+07 0 0.10334 0.981527 0.857041 5.31493e+07 0.00336184 1.20562e+07 4.78522e+07 1.22743e+07 172 1.22404e+07 1.2127e+07 0.00265488 1.22176e+07 49.9534 0.0217244 0.984017 0 50.4482 GTEX-SUCS-1126-SM-4DM61 1 B1 2 pieces 9x7 & 8x7 mm; hyperplasia; one piece with ~30% adipose7on one side 7.2 Prostate Prostate 0002367 185 1152 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988498 419536 0.970726 0.991397 0.824175 22511 1 76 0.00206753 155 0 7.33361e+07 0.0289881 358428 7.39725e+07 5.43133e+06 22539 3.64618e+07 0 0.146551 0.991397 0.817085 7.33361e+07 0.00343508 1.59011e+07 7.45753e+06 1.59223e+07 173 1.59467e+07 1.31864e+07 0.0027493 1.60815e+07 50.2104 0.00484543 0.994297 0 50.0332 GTEX-SUCS-1326-SM-4DM5T 1 B1 2 pieces 8x7 & 8x6 mm; moderately reduced spermatogenesis 6.6 Testis Testis 0000473 190 1148 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988942 552818 0.91875 0.990733 0.731062 31835 1 76 0.00218673 134 0 6.64106e+07 0.0809837 852292 6.70318e+07 4.76051e+06 31888 3.30604e+07 0 0.187688 0.990733 0.724287 6.64106e+07 0.00345496 1.37104e+07 1.81253e+07 1.37377e+07 139 1.37637e+07 1.00888e+07 0.0028197 1.37988e+07 50.0637 0.0127147 0.992524 0 50.0497 GTEX-SUCS-1426-SM-4DM5W 1 B1 2 pieces 11x4 & 9x7 mm; mild patchy fibrosis; ~10% adipose at one edge; scattered adipose in parenchyma 7.4 Pancreas Pancreas 0001150 196 1142 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986742 298266 0.975016 0.989563 0.836663 21406 1 76 0.00222409 109 0 6.19845e+07 0.0247384 327915 6.26382e+07 4.51372e+06 21421 3.08041e+07 0 0.138353 0.989563 0.827931 6.19845e+07 0.00370596 1.41976e+07 1.69737e+07 1.43034e+07 117 1.43281e+07 1.69615e+07 0.00296291 1.43505e+07 50.0392 0.00523506 0.992384 0 50.1856 GTEX-SUCS-1626-SM-32PLS 0 B1 2 pieces 10x7 & 9x9 mm; no adipose 7.8 Muscle Muscle - Skeletal 0011907 200 1140 BP-24624 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.947699 180093 0.980144 0.951596 0.875023 20914 1 76 0.00216233 215 0 9.86006e+07 0.0196106 1.37814e+06 1.03616e+08 8.45726e+06 20929 4.89732e+07 0 0.105121 0.951596 0.832669 9.86006e+07 0.00755423 2.1691e+07 1.26008e+07 2.20083e+07 234 2.20855e+07 1.97708e+07 0.00484724 2.19771e+07 49.877 0.0133005 0.955493 0 50.363 GTEX-SUCS-1726-SM-32PM8 1 B1 2 pieces 6x3 & 5x3 mm; virtually fat free; 6.4 Nerve Nerve - Tibial 0001323 202 1138 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.694781 48734 0.971067 0.702832 0.792455 21579 1 76 0.00244056 122 0 3.78535e+07 0.0286763 191128 5.38586e+07 5.71691e+06 21594 1.86256e+07 0 0.178612 0.702832 0.556963 3.78535e+07 0.00870347 8.21398e+06 3.35306e+06 8.33891e+06 114 8.51541e+06 6.35232e+06 0.00553614 8.45411e+06 49.8194 0.0035487 0.710884 0 50.3774 GTEX-SUCS-1826-SM-32PM1 1 B1 pieces 10x5 & 11x9 mm; adipose tissue and an embedded 3x1 mm nerve 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 203 1137 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.942342 145900 0.979167 0.94612 0.850601 22935 1 76 0.00233063 212 0 9.59107e+07 0.0205426 806103 1.01373e+08 8.88569e+06 22956 4.76237e+07 0 0.128566 0.94612 0.804771 9.59107e+07 0.00785146 2.11609e+07 9.09897e+06 2.13845e+07 236 2.14968e+07 1.74071e+07 0.00508002 2.14111e+07 49.9001 0.00795188 0.949898 0 50.2627 GTEX-SUCS-1926-SM-32PM3 1 B1 6 pieces up to 8x2 mm; most subcutaneous adipose removed; considerable tissue fracture 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 209 1131 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.969361 165598 0.970592 0.97293 0.81489 24640 1 76 0.00245809 282 0 1.11841e+08 0.0291752 781858 1.14953e+08 1.0026e+07 24668 5.5545e+07 0 0.155702 0.97293 0.792831 1.11841e+08 0.00802039 2.43039e+07 1.25268e+07 2.45365e+07 272 2.46084e+07 1.89745e+07 0.00522904 2.46189e+07 50.0107 0.00680154 0.9765 0 50.2381 GTEX-T2IS-0002-SM-3259Y C1 Blood Whole Blood 0013756 1110 BP-23334 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/22/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003067_R01C01 GTEX-T2IS-0002-SM-325HF C1 Blood Whole Blood 0013756 1110 BP-23334 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/22/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R01C01 GTEX-T2IS-0002-SM-4X5ZR C1 Blood Whole Blood 0013756 1110 BP-23334 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/22/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-T2IS-0002-SM-5SOEK C1 Blood Whole Blood 0013756 1110 BP-23334 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/22/2012 LCSET-5226,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T2IS-0008-SM-4DM75 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1077 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990342 586633 0.966749 0.992539 0.831156 20482 1 76 0.001861 145 0 6.57692e+07 0.0329207 238410 6.62636e+07 4.67094e+06 20497 3.27261e+07 0 0.135594 0.992539 0.824954 6.57692e+07 0.00306927 1.4474e+07 1.61868e+07 1.45863e+07 138 1.46398e+07 1.59448e+07 0.00246379 1.45688e+07 49.8784 0.0035979 0.994736 0 50.1931 GTEX-T2IS-0011-R11A-SM-32QPC C1, A1 8.5 Brain Brain - Cerebellar Hemisphere 0002037 1099 BP-24010 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.983228 357281 0.95417 0.986994 0.764945 24411 1 76 0.00244493 231 0 1.10526e+08 0.0452712 978219 1.11982e+08 1.40378e+07 24457 5.48525e+07 0 0.189226 0.986994 0.754996 1.10526e+08 0.00774391 2.38938e+07 1.24755e+07 2.40531e+07 257 2.41494e+07 1.61841e+07 0.00508431 2.41792e+07 50.0308 0.00873549 0.990761 0 50.1661 GTEX-T2IS-0011-R2A-SM-32QPF C1, A1 6 Brain Brain - Substantia nigra 0002038 1099 BP-24010 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.97905 212249 0.968662 0.983377 0.835778 24628 1 76 0.00263833 278 0 1.08814e+08 0.0309572 5.32724e+06 1.10653e+08 1.49902e+07 24659 5.39865e+07 0 0.132884 0.983377 0.821885 1.08814e+08 0.00840466 2.41292e+07 1.05742e+07 2.44862e+07 328 2.43437e+07 1.40525e+07 0.00550881 2.47002e+07 50.3635 0.0481436 0.987703 0 50.3672 GTEX-T2IS-0011-R3A-SM-32QPB C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1099 BP-24010 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.924824 321043 0.969373 0.929495 0.870493 23827 1 76 0.00237121 271 0 1.01338e+08 0.0301026 3.48628e+06 1.09025e+08 1.50183e+07 23851 5.02441e+07 0 0.0988799 0.929495 0.809119 1.01338e+08 0.00787322 2.20958e+07 8.71617e+06 2.2716e+07 321 2.27261e+07 1.35003e+07 0.00510839 2.2527e+07 49.78 0.031977 0.934166 0 50.6921 GTEX-T2IS-0011-R5A-SM-32QP4 C1, A1 7 Brain Brain - Caudate (basal ganglia) 0001873 1099 BP-24010 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.981844 238575 0.963127 0.985022 0.85157 24453 1 76 0.00219415 372 0 1.26607e+08 0.0364291 5.39048e+06 1.28532e+08 1.60886e+07 24491 6.29309e+07 0 0.111557 0.985022 0.838815 1.26607e+08 0.00690375 2.78445e+07 1.22237e+07 2.75577e+07 399 2.75104e+07 1.41526e+07 0.00454135 2.82489e+07 50.6623 0.0419388 0.9882 0 49.7412 GTEX-T2IS-0011-R6A-SM-32QP2 C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1099 BP-24010 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.965537 241530 0.967796 0.970368 0.849455 25003 1 76 0.00252335 372 0 1.07099e+08 0.0317525 5.12744e+06 1.10369e+08 1.54071e+07 25025 5.31137e+07 0 0.118341 0.970368 0.824285 1.07099e+08 0.00832227 2.33347e+07 1.16589e+07 2.39335e+07 362 2.39978e+07 1.35678e+07 0.00540837 2.37365e+07 49.7264 0.046457 0.975201 0 50.6334 GTEX-T2IS-0126-SM-4DM6O 0 C1 6 pieces ~ 6x3mm. Squamous epithelium is ~2-3% of thickness 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1076 1357 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986998 361112 0.968214 0.989044 0.813387 22350 1 76 0.00228001 156 0 5.98099e+07 0.0315665 193589 6.04725e+07 4.27131e+06 22372 2.9761e+07 0 0.154827 0.989044 0.804475 5.98099e+07 0.00378237 1.2996e+07 8.90707e+06 1.30057e+07 144 1.30266e+07 1.02771e+07 0.00302964 1.30978e+07 50.1363 0.00320127 0.991089 0 50.0187 GTEX-T2IS-0226-SM-32QPH 0 C1 2 ~8x7 mm pieces 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 1079 1354 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.66246 108017 0.97209 0.674818 0.803684 22600 1 76 0.00262952 128 0 4.88748e+07 0.0276183 187582 7.24267e+07 1.55365e+07 22619 2.38538e+07 0 0.168406 0.674818 0.54234 4.88748e+07 0.00997013 1.04458e+07 5.31938e+06 1.06007e+07 128 1.09589e+07 8.15384e+06 0.00623261 1.09242e+07 49.9208 0.00258996 0.687175 0 50.368 GTEX-T2IS-0426-SM-32QPE 1 C1 2 pieces, ~6x6mm, mimimal ischemic changes 6.2 Heart Heart - Left Ventricle 0006566 1119 1316 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.968535 154121 0.988378 0.972078 0.864659 21159 1 76 0.00280251 365 0 1.32703e+08 0.0115378 8.76862e+06 1.36515e+08 2.02286e+07 21182 6.5973e+07 0 0.123719 0.972078 0.840516 1.32703e+08 0.00770936 2.84632e+07 4.13459e+07 3.08098e+07 436 3.02406e+07 7.47055e+06 0.00524699 2.92276e+07 49.1483 0.064232 0.975621 0 51.9795 GTEX-T2IS-0526-SM-32QP9 1 C1 2 pieces ~9x4mm, mild-moderate emphysematous changes 7.2 Lung Lung 0008952 1122 1313 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.856099 286645 0.97047 0.861039 0.780089 24969 1 76 0.00291464 175 0 8.91877e+07 0.0290793 179290 1.03582e+08 1.47427e+07 25010 4.41439e+07 0 0.190381 0.861039 0.671687 8.91877e+07 0.00884961 1.95178e+07 1.043e+07 1.96609e+07 187 1.97893e+07 1.47963e+07 0.0058651 1.98786e+07 50.1126 0.00173091 0.865979 0 50.1826 GTEX-T2IS-0626-SM-32QP6 1 C1 2 pieces, ~8x7mm. Good clean specimens 7.4 Thyroid Thyroid 0002046 1124 1312 BP-24455 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.976433 225416 0.969024 0.98041 0.79998 24987 1 76 0.00248599 192 0 1.05398e+08 0.0305133 148086 1.07504e+08 1.49279e+07 25037 5.23188e+07 0 0.169044 0.98041 0.784309 1.05398e+08 0.00819916 2.29109e+07 1.00585e+07 2.30558e+07 226 2.31343e+07 1.8998e+07 0.00533098 2.32339e+07 50.1075 0.0013775 0.984388 0 50.1576 GTEX-T2IS-0826-SM-4DM6L 0 C1 6 pieces ~ 5x2mm, squamous mucosa is ~10-15% thickness 7.8 Esophagus Esophagus - Mucosa 0006920 1128 1309 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98764 443203 0.964169 0.989971 0.770078 22478 1 76 0.0022551 122 0 5.7811e+07 0.0356201 326196 5.83966e+07 4.07218e+06 22496 2.87412e+07 0 0.194091 0.989971 0.762355 5.7811e+07 0.00374522 1.2776e+07 1.02647e+07 1.28299e+07 133 1.28667e+07 9.1311e+06 0.0029984 1.28789e+07 50.0237 0.00558587 0.992302 0 50.1053 GTEX-T2IS-0926-SM-4DM5B 1 C1 6 pieces ~7x7mm 6.7 Esophagus Esophagus - Muscularis 0004648 1130 1308 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987331 295834 0.967436 0.989251 0.806626 23150 1 76 0.00224986 159 0 7.40216e+07 0.0323531 669271 7.48258e+07 5.34902e+06 23170 3.68208e+07 0 0.16081 0.989251 0.797956 7.40216e+07 0.00359549 1.58388e+07 8.0185e+06 1.5879e+07 184 1.58657e+07 1.10721e+07 0.00292137 1.59901e+07 50.1953 0.00894438 0.991171 0 50.0634 GTEX-T2IS-1026-SM-32QP1 0 C1 2 pieces, ~ 2mm d. Good clean specimens, no atherosclerosis 8 Blood Vessel Artery - Tibial 0007610 1137 1302 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.690268 299917 0.975284 0.694412 0.824552 22048 1 76 0.00245434 200 0 9.85541e+07 0.0242998 338093 1.41925e+08 2.43706e+07 22084 4.87799e+07 0 0.150732 0.694412 0.572579 9.85541e+07 0.00818817 2.08978e+07 8.12847e+06 2.12598e+07 223 2.13777e+07 1.74071e+07 0.00530415 2.13305e+07 49.9448 0.0023822 0.698555 0 50.4294 GTEX-T2IS-1126-SM-4DM6Z 0 C1 2 pieces, ~4mm d. Good clean specimens 6.9 Nerve Nerve - Tibial 0001323 1138 1302 BP-24457 RNA isolation_PAXgene Tissue miRNA 04/23/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987192 227638 0.96699 0.989423 0.815407 22182 1 76 0.00217502 125 0 5.18005e+07 0.0326901 208231 5.23542e+07 3.69885e+06 22201 2.57611e+07 0 0.151583 0.989423 0.806783 5.18005e+07 0.0035588 1.13311e+07 6.4818e+06 1.137e+07 128 1.13858e+07 8.6771e+06 0.00286535 1.14313e+07 50.0996 0.00397735 0.991655 0 50.0856 GTEX-T2IS-1526-SM-32QPR 1 C1 2 pieces ~ 10x8mm. Large areolar ductal units, fibrotic stroma 7 Breast Breast - Mammary Tissue 0008367 1196 1248 BP-24514 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.956901 176270 0.971711 0.962063 0.775075 24913 1 76 0.00269041 181 0 9.3158e+07 0.027869 161821 9.68315e+07 1.41293e+07 24956 4.61659e+07 0 0.196637 0.962063 0.745671 9.3158e+07 0.00884843 2.04895e+07 1.05199e+07 2.05566e+07 194 2.06832e+07 1.62934e+07 0.0057529 2.08431e+07 50.1925 0.00167116 0.967226 0 50.0818 GTEX-T2IS-1926-SM-4DM74 1 C1 6 pieces, ~7x3mm, squamous mucosa is ~5-10% thickness 6.5 Vagina Vagina 0000996 1206 1252 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 07/23/2013 TruSeq.v1 RNASEQ 0.983215 712534 0.94864 0.985362 0.737341 23752 1 76 0.00216182 131 0 6.72668e+07 0.0511561 217839 6.82661e+07 3.76949e+06 23779 3.34497e+07 0 0.211299 0.985362 0.726548 6.72668e+07 0.00325312 1.45531e+07 2.05696e+07 1.47057e+07 147 1.4735e+07 1.04586e+07 0.00270628 1.46838e+07 49.913 0.00319103 0.987508 0 50.2608 GTEX-T2IS-2026-SM-4DM6W 1 C1 2 pieces ~7x6mm. Oocytes present, one cumulous oophorous noted, + hemorrhagic cyst. 6.5 Ovary Ovary 0000992 1208 1250 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986963 613337 0.945035 0.989674 0.705325 22741 1 76 0.00223802 116 0 5.31174e+07 0.0547289 60446 5.36716e+07 3.81676e+06 22771 2.63996e+07 0 0.23971 0.989674 0.698042 5.31174e+07 0.00358769 1.13493e+07 1.74038e+07 1.14129e+07 112 1.14618e+07 8.72464e+06 0.00291101 1.14557e+07 49.9866 0.00112622 0.992385 0 50.1397 GTEX-T2IS-2226-SM-4DM65 2 C1 2 pieces, ~8mm x 8mm. 2x2mm focus of totaly autolyzed endometrium in one aliquot 8.4 Uterus Uterus 0000995 1214 1245 BP-24519 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988394 375372 0.964278 0.990504 0.799531 22297 1 76 0.00214336 123 0 5.81047e+07 0.0354625 52652 5.86618e+07 4.17418e+06 22313 2.89061e+07 0 0.164747 0.990504 0.791938 5.81047e+07 0.00350949 1.25418e+07 8.14747e+06 1.26037e+07 130 1.26044e+07 1.07042e+07 0.00282497 1.26677e+07 50.1252 0.000897552 0.992613 0 50.1231 GTEX-T2IS-2626-SM-32QPP 0 C1 2 pieces ~11x6mm, minimal interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 1224 1240 BP-24530 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.964167 214132 0.98462 0.968954 0.879425 21152 1 76 0.00234583 249 0 1.21715e+08 0.0151284 1.07933e+06 1.25614e+08 1.76648e+07 21172 6.03993e+07 0 0.105194 0.968954 0.852123 1.21715e+08 0.0086086 2.63626e+07 1.18453e+07 2.70301e+07 280 2.70491e+07 2.39709e+07 0.00546174 2.68628e+07 49.8273 0.00859243 0.973742 0 50.6251 GTEX-T2IS-2926-SM-32QPO 1 C1 4 pieces, ~5x5mm 7.2 Brain Brain - Cerebellum 0002037 1232 1234 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.980541 325579 0.950573 0.984095 0.728228 24583 1 76 0.00254461 172 0 9.83903e+07 0.0490272 904320 9.99805e+07 1.30061e+07 24625 4.88449e+07 0 0.222345 0.984095 0.716646 9.83903e+07 0.00744707 2.12018e+07 1.34583e+07 2.14563e+07 217 2.15152e+07 1.24383e+07 0.00498699 2.14619e+07 49.938 0.00904496 0.987649 0 50.2983 GTEX-T2IS-3026-SM-32QPM 1 C1 4 pieces, ~4.5x4.5mm 7.2 Brain Brain - Cortex 0001870 1235 1232 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.971965 467821 0.963325 0.975657 0.844763 24226 1 76 0.00250375 339 0 1.05402e+08 0.0362362 3.18487e+06 1.08032e+08 1.30641e+07 24244 5.23447e+07 0 0.118562 0.975657 0.8242 1.05402e+08 0.00805282 2.28994e+07 1.97951e+07 2.35843e+07 341 2.3558e+07 1.23013e+07 0.00526779 2.32704e+07 49.693 0.0294807 0.97935 0 50.7367 GTEX-T2IS-3126-SM-32QPK 1 C1 1 piece, ~5x5mm, reasonably well preserved for an endocrine organ 7.8 Pituitary Pituitary 0000007 1229 1238 BP-24528 RNA isolation_PAXgene Tissue miRNA 04/24/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.542997 239835 0.951504 0.547921 0.74949 23819 1 76 0.00256781 116 0 5.29396e+07 0.0481335 152914 9.66189e+07 1.75344e+07 23854 2.60736e+07 0 0.202014 0.547921 0.410662 5.29396e+07 0.00815624 1.11898e+07 1.02895e+07 1.12747e+07 126 1.14433e+07 8.49718e+06 0.00533691 1.14806e+07 50.0814 0.00158265 0.552846 0 50.1889 GTEX-T2YK-0003-SM-325AB C1 Blood Whole Blood 0013756 650 BP-23335 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/23/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003157_R01C01 GTEX-T2YK-0003-SM-325HR C1 Blood Whole Blood 0013756 650 BP-23335 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/23/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R05C01 GTEX-T2YK-0003-SM-3USRJ C1 Blood Whole Blood 0013756 650 BP-23335 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/23/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-T2YK-0003-SM-5URCD C1 Blood Whole Blood 0013756 650 BP-23335 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/23/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T2YK-0005-SM-32QOV C1 6.8 Blood Whole Blood 0013756 650 BP-23336 RNA isolation_PAXgene Blood RNA (Manual) 03/23/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.54951 184564 0.969372 0.557146 0.777188 20459 1 76 0.00352122 135 0 4.58453e+07 0.0298411 362321 8.22859e+07 1.94985e+07 20467 2.24429e+07 0 0.192184 0.557146 0.433007 4.58453e+07 0.0103185 1.00685e+07 2.0903e+07 1.01768e+07 133 1.04382e+07 7.9593e+06 0.00687326 1.04024e+07 49.9141 0.00440319 0.564782 0 50.2676 GTEX-T2YK-0008-SM-4DM6M C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 860 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989843 698878 0.974002 0.99245 0.866893 20232 1 76 0.00194613 185 0 8.41976e+07 0.0256278 222872 8.48382e+07 6.18385e+06 20245 4.18899e+07 0 0.107109 0.99245 0.860347 8.41976e+07 0.00316051 1.87873e+07 1.67766e+07 1.88055e+07 179 1.89019e+07 2.23646e+07 0.00255172 1.8914e+07 50.0161 0.00262703 0.995056 0 50.0242 GTEX-T2YK-0226-SM-4DM5O 1 C1 2 pieces 10x7 & 8x8 mm; patchy fibrosis; ~40% adipose in aliquots 5.7 Muscle Muscle - Skeletal 0011907 844 1163 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-3205 05/31/2013 TruSeq.v1 EXCLUDE 0.978901 246530 0.969592 0.981369 0.841092 20093 1 76 0.00354271 126 0 5.72925e+07 0.030286 4.17278e+06 5.83802e+07 4.14908e+06 20102 2.84924e+07 0 0.1285 0.981369 0.825422 5.72925e+07 0.00498963 1.253e+07 1.32139e+07 1.2643e+07 159 1.25772e+07 4.40833e+06 0.00426435 1.27233e+07 50.2889 0.071476 0.983837 0 50.2244 GTEX-T2YK-0326-SM-4DM7D 1 C1 2 pieces 5x3 & 5x4 mm; ~20 & 40% peripheral adipose 5.9 Nerve Nerve - Tibial 0001323 846 1162 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-3205 07/23/2013 TruSeq.v1 RNASEQ 0.986195 370374 0.965762 0.987912 0.764883 23418 1 76 0.00228866 158 0 7.54037e+07 0.0339675 309719 7.63263e+07 4.1986e+06 23441 3.75112e+07 0 0.20088 0.987912 0.755637 7.54037e+07 0.00332994 1.65273e+07 1.08743e+07 1.66064e+07 168 1.66256e+07 1.22414e+07 0.0028084 1.66436e+07 50.0271 0.00405783 0.98963 0 50.1195 GTEX-T2YK-0526-SM-32QPJ 1 C1 6 pieces up to 8x3.5 mm; subcutaneous adipose up to 0.6mm 7 Skin Skin - Sun Exposed (Lower leg) 0004264 859 1152 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.625971 207094 0.977217 0.631039 0.801622 21006 1 76 0.00297125 153 0 5.96498e+07 0.0223627 583898 9.45264e+07 1.65035e+07 21031 2.94093e+07 0 0.175595 0.631039 0.505855 5.96498e+07 0.00913934 1.29487e+07 6.8488e+06 1.31434e+07 137 1.33096e+07 1.02751e+07 0.00603053 1.32367e+07 49.8627 0.00617709 0.636107 0 50.3732 GTEX-T2YK-1126-SM-EVYAL 1 C1 2 pieces 2x2 mm; 1 ~80% adipose; other 100% adipose 5.5 Blood Vessel Artery - Coronary 0001621 878 1138 BP-24624 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.972876 247753 0.971708 0.973538 0.804885 22706 1 76 0.0025215 208 0 8.64843e+07 0.0280627 2.09125e+06 8.8835e+07 3.93403e+06 22733 4.30841e+07 0 0.166822 0.973538 0.783587 8.64843e+07 0.00372579 1.903e+07 1.35485e+07 1.93424e+07 238 1.92373e+07 1.14895e+07 0.00312323 1.92008e+07 49.9525 0.0235409 0.9742 0 50.4071 GTEX-T2YK-1326-SM-4DM6S 1 C1 6 pieces up to 7x2 mm; squamous mucosa well preserved; submucosal glands moderately autolyzed 6.7 Esophagus Esophagus - Mucosa 0006920 882 1141 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.97921 382859 0.95933 0.982139 0.780429 20416 1 76 0.00273126 119 0 5.65592e+07 0.0404475 746361 5.75878e+07 4.32908e+06 20425 2.81091e+07 0 0.1789 0.982139 0.76649 5.65592e+07 0.00416015 1.24338e+07 1.38343e+07 1.25604e+07 141 1.25922e+07 7.11694e+06 0.00344358 1.25728e+07 49.9615 0.0129604 0.985067 0 50.2532 GTEX-T2YK-2226-SM-32QPT 2 C1 2 pieces 10x7 & 9x8 mm; gynecomastia with ductal and fibrous tissue; 80 and 60 % adipose 6 Breast Breast - Mammary Tissue 0008367 905 1128 BP-24618 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.358338 66832 0.970664 0.36289 0.73403 22272 1 76 0.00301917 130 0 3.73929e+07 0.0287432 353313 1.03042e+08 2.05773e+07 22291 1.82707e+07 0 0.236635 0.36289 0.266372 3.73929e+07 0.00999905 8.08561e+06 4.53654e+06 8.20673e+06 132 8.39847e+06 5.67835e+06 0.00646533 8.34268e+06 49.8334 0.00342883 0.367443 0 50.3717 GTEX-T2YK-2326-SM-EZ6LA 3 C1 6 pieces up to 9x4 mm; all epithelium sloughed 5.9 Bladder Bladder 0001255 907 1131 BP-24624 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.984887 127522 0.974884 0.986217 0.822964 22796 1 76 0.00251739 281 0 8.81415e+07 0.0248687 920888 8.93733e+07 6.59443e+06 22809 4.39235e+07 0 0.15192 0.986217 0.811621 8.81415e+07 0.00355693 1.93633e+07 1.11215e+07 1.94597e+07 263 1.94215e+07 1.7084e+07 0.00303646 1.95178e+07 50.1236 0.0103038 0.987548 0 50.1242 GTEX-T5JC-0001-SM-3NMAK C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 461 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990403 643916 0.968675 0.992712 0.77429 21852 1 76 0.00395605 183 0 1.03652e+08 0.0309258 615909 1.04413e+08 1.96359e+07 21894 5.15395e+07 0 0.194385 0.992712 0.768647 1.03652e+08 0.00508617 2.29934e+07 1.94997e+07 2.30588e+07 195 2.31562e+07 2.27741e+07 0.00451979 2.31374e+07 49.9796 0.00589877 0.995021 0 50.071 GTEX-T5JC-0001-SM-5S2S4 C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 461 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0002-SM-325A9 C1 Blood Whole Blood 0013756 461 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003131_R04C01 GTEX-T5JC-0002-SM-325HQ C1 Blood Whole Blood 0013756 461 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R02C02 GTEX-T5JC-0002-SM-4X62I C1 Blood Whole Blood 0013756 461 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-T5JC-0002-SM-5SOER C1 Blood Whole Blood 0013756 461 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 LCSET-5226,LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T5JC-0005-SM-4DM7B C1 7.4 Blood Whole Blood 0013756 461 BP-23374 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2012 LCSET-3205 05/31/2013 TruSeq.v1 EXCLUDE 0.977902 311905 0.9772 0.980041 0.794504 16983 1 76 0.00230064 91 0 5.17346e+07 0.0212082 216361 5.27882e+07 3.68878e+06 16985 2.56829e+07 0 0.182696 0.980041 0.778646 5.17346e+07 0.00404659 1.20213e+07 7.4827e+07 1.21658e+07 109 1.21768e+07 1.32418e+07 0.00317171 1.21325e+07 49.9089 0.00409866 0.982179 0 50.2986 GTEX-T5JC-0005-SM-5S2SQ C1 7.4 Blood Whole Blood 0013756 461 BP-23374 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0006-SM-EZ6L9 C1 5.9 Blood Whole Blood 0013756 461 BP-23374 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.9668 251199 0.987178 0.968651 0.831036 18650 1 76 0.00254741 185 0 1.03892e+08 0.0119039 660425 1.07255e+08 8.22957e+06 18656 5.17082e+07 0 0.156142 0.968651 0.804984 1.03892e+08 0.00419283 2.44046e+07 1.38689e+08 2.45338e+07 203 2.45304e+07 2.74116e+07 0.00336855 2.46072e+07 50.0782 0.00615755 0.970503 0 50.1319 GTEX-T5JC-0008-SM-4DM6A C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 664 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.99173 676058 0.963992 0.993638 0.834109 21244 1 76 0.00191728 191 0 7.91832e+07 0.035596 225686 7.96901e+07 5.65599e+06 21259 3.94196e+07 0 0.129883 0.993638 0.828802 7.91832e+07 0.00310789 1.7464e+07 1.83817e+07 1.74998e+07 183 1.75786e+07 1.733e+07 0.00251144 1.75333e+07 49.9355 0.00283204 0.995546 0 50.0513 GTEX-T5JC-0011-R10A-SM-32PM2 C1, A1 9.4 Brain Brain - Frontal Cortex (BA9) 0009834 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.931559 242102 0.965836 0.935019 0.852555 24111 1 76 0.00220952 202 0 8.43547e+07 0.0335051 2.24296e+06 9.02171e+07 7.65036e+06 24128 4.18856e+07 0 0.113281 0.935019 0.797156 8.43547e+07 0.00770311 1.8491e+07 1.10116e+07 1.87349e+07 222 1.88515e+07 1.28604e+07 0.00494615 1.86553e+07 49.7385 0.0248618 0.938479 0 50.3276 GTEX-T5JC-0011-R10A-SM-5S2TK C1, A1 9.4 Brain Brain - Frontal Cortex (BA9) 0009834 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0011-R11A-SM-32PMB C1, A1 9.8 Brain Brain - Cerebellar Hemisphere 0002037 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.968029 187579 0.951864 0.971044 0.748894 23131 1 76 0.00256544 134 0 7.52332e+07 0.0475471 716009 7.74766e+07 5.76941e+06 23154 3.73533e+07 0 0.20297 0.971044 0.727209 7.52332e+07 0.00759471 1.63057e+07 9.62142e+06 1.6415e+07 155 1.65148e+07 1.1053e+07 0.00507227 1.64194e+07 49.8552 0.00924162 0.974059 0 50.167 GTEX-T5JC-0011-R11A-SM-5S2RX C1, A1 9.8 Brain Brain - Cerebellar Hemisphere 0002037 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0011-R1A-SM-32PM6 C1, A1 8.3 Brain Brain - Hippocampus 0001954 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.610043 66294 0.966801 0.618433 0.850046 21080 1 76 0.00233662 95 0 3.07334e+07 0.0327754 2.02125e+06 4.96955e+07 5.99661e+06 21086 1.5092e+07 0 0.116756 0.618433 0.525697 3.07334e+07 0.00872885 6.66937e+06 4.40103e+06 6.86936e+06 102 7.04913e+06 3.80244e+06 0.00548937 6.88245e+06 49.4018 0.0406728 0.626824 0 50.7386 GTEX-T5JC-0011-R2A-SM-32PLZ C1, A1 8 Brain Brain - Substantia nigra 0002038 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.690907 118648 0.971318 0.694294 0.846351 23216 1 76 0.00229155 171 0 7.43127e+07 0.0282923 4.89921e+06 1.07034e+08 1.06723e+07 23235 3.68503e+07 0 0.124967 0.694294 0.587616 7.43127e+07 0.00783784 1.646e+07 8.05885e+06 1.68999e+07 190 1.69537e+07 1.0341e+07 0.00505117 1.67359e+07 49.6767 0.0457726 0.697681 0 50.6593 GTEX-T5JC-0011-R4A-SM-32PLT C1, A1 8.6 Brain Brain - Amygdala 0001876 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.798005 213969 0.968829 0.799698 0.862626 23969 1 76 0.00221775 263 0 8.6587e+07 0.030758 4.45776e+06 1.08275e+08 1.0061e+07 23988 4.30067e+07 0 0.106202 0.799698 0.68984 8.6587e+07 0.00736665 1.91992e+07 1.19687e+07 1.93469e+07 261 1.9329e+07 1.14566e+07 0.00478675 1.93727e+07 50.0564 0.0411709 0.801391 0 50.1916 GTEX-T5JC-0011-R5A-SM-32PLK C1, A1 8.9 Brain Brain - Caudate (basal ganglia) 0001873 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.84208 160087 0.96575 0.845498 0.857597 22032 1 76 0.00220116 119 0 5.1661e+07 0.0338172 2.96306e+06 6.11013e+07 1.12676e+07 22040 2.56453e+07 0 0.108153 0.845498 0.725096 5.1661e+07 0.00740795 1.1386e+07 9.58454e+06 1.14888e+07 141 1.15284e+07 6.44161e+06 0.00479403 1.1525e+07 49.9926 0.0484942 0.848916 0 50.2246 GTEX-T5JC-0011-R6A-SM-32PMI C1, A1 9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 TruSeq.v1 EXCLUDE 0.347845 27766 0.966376 0.371369 0.822797 19442 1 76 0.00399059 121 0 2.50807e+07 0.0333069 1.06524e+06 6.75357e+07 8.83482e+06 19447 1.17351e+07 0 0.143579 0.371369 0.305561 2.50807e+07 0.187201 5.13406e+06 3.19892e+06 5.33188e+06 154 5.97375e+06 2.39129e+06 0.0897931 5.84642e+06 49.4614 0.015773 0.394894 0 50.9451 GTEX-T5JC-0011-R6A-SM-5SI89 C1, A1 9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.99031 578512 0.959429 0.993063 0.822801 24055 1 76 0.00195195 198 0 7.13435e+07 0.0401222 2.91269e+06 7.18419e+07 6.96522e+06 24075 3.54836e+07 0 0.136628 0.993063 0.817094 7.13435e+07 0.00294782 1.56519e+07 1.74031e+07 1.55373e+07 235 1.556e+07 8.97151e+06 0.00244851 1.58055e+07 50.3915 0.040543 0.995816 0 49.8162 GTEX-T5JC-0011-R6A-SM-D3L87 C1, A1 9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-9919 10/23/2016 TruSeq.v1 RNASEQ 0.991174 903453 0.960629 0.993286 0.825324 26041 1 76 0.00249117 374 0 1.14936e+08 0.0388713 5.09075e+06 1.15713e+08 1.15325e+07 26081 5.7197e+07 0 0.135305 0.993286 0.819783 1.14936e+08 0.00338556 2.5074e+07 2.27709e+07 2.54234e+07 334 2.5524e+07 1.5489e+07 0.00293742 2.51999e+07 49.6805 0.0439947 0.995399 0 50.346 GTEX-T5JC-0011-R7A-SM-32PME C1, A1 9.1 Brain Brain - Putamen (basal ganglia) 0001874 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.981622 298310 0.966072 0.984638 0.859681 24179 1 76 0.00223949 371 0 1.0519e+08 0.0336113 6.74988e+06 1.06831e+08 8.7237e+06 24199 5.22712e+07 0 0.106391 0.984638 0.846475 1.0519e+08 0.00748409 2.31827e+07 1.64728e+07 2.34555e+07 397 2.34798e+07 1.20674e+07 0.00485375 2.34347e+07 49.952 0.0631826 0.987653 0 50.2925 GTEX-T5JC-0011-R8A-SM-32PLM C1, A1 9.3 Brain Brain - Hypothalamus 0001898 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.982666 294375 0.964975 0.985258 0.846525 25253 1 76 0.00222579 372 0 1.06533e+08 0.0344054 2.93889e+06 1.08127e+08 8.41396e+06 25276 5.29475e+07 0 0.118449 0.985258 0.834046 1.06533e+08 0.00720105 2.34657e+07 1.31657e+07 2.35324e+07 355 2.36407e+07 1.60204e+07 0.00470687 2.36144e+07 49.9722 0.0271801 0.987851 0 50.071 GTEX-T5JC-0011-R9A-SM-32PLV C1, A1 8.9 Brain Brain - Spinal cord (cervical c-1) 0006469 483 BP-24011 RNA isolation_PAXgene Tissue miRNA 04/10/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.902521 158543 0.971675 0.905789 0.82462 24644 1 76 0.00234706 297 0 1.09709e+08 0.0278534 1.47399e+06 1.2112e+08 1.10505e+07 24675 5.44666e+07 0 0.147055 0.905789 0.746932 1.09709e+08 0.00785822 2.44996e+07 1.07981e+07 2.48233e+07 302 2.484e+07 1.87378e+07 0.00509269 2.48643e+07 50.0245 0.0121697 0.909057 0 50.3281 GTEX-T5JC-0226-SM-32PMA 0 C1 2 pieces, ~ 2 mm diameter; artery no extraneous adipose 8.1 Blood Vessel Artery - Tibial 0007610 659 831 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.827821 133875 0.974477 0.829751 0.832633 21407 1 76 0.00227862 171 0 8.93999e+07 0.0251347 367094 1.07743e+08 9.84846e+06 21427 4.43821e+07 0 0.141843 0.829751 0.690878 8.93999e+07 0.00740238 1.89644e+07 7.06071e+06 1.91221e+07 190 1.91265e+07 1.72135e+07 0.00483454 1.91496e+07 50.0302 0.00340712 0.831681 0 50.2071 GTEX-T5JC-0226-SM-5S2SM 0 C1 2 pieces, ~ 2 mm diameter; artery no extraneous adipose 8.1 Blood Vessel Artery - Tibial 0007610 659 831 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0326-SM-4DM5C 1 C1 6 pieces up to 9x1.4 mm; 7.4 Blood Vessel Artery - Aorta 0001496 662 830 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986406 313357 0.968896 0.988475 0.807288 21634 1 76 0.00228088 141 0 6.9175e+07 0.0307467 93179 6.99816e+07 4.84386e+06 21652 3.43928e+07 0 0.161608 0.988475 0.797983 6.9175e+07 0.0036649 1.48719e+07 7.3e+06 1.49039e+07 157 1.49359e+07 1.24726e+07 0.00297144 1.49819e+07 50.0769 0.00133148 0.990544 0 50.0536 GTEX-T5JC-0426-SM-32PLO 1 C1 6 pieces up to 8x3 mm; no subcutaneous adipose 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 663 828 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.81669 81274 0.974665 0.822659 0.788904 21849 1 76 0.00244736 147 0 4.45649e+07 0.0250852 404653 5.41718e+07 5.38337e+06 21868 2.20461e+07 0 0.185761 0.822659 0.648999 4.45649e+07 0.00830685 9.74895e+06 5.57597e+06 9.85145e+06 117 9.98847e+06 7.60011e+06 0.00535585 9.92427e+06 49.8388 0.00746981 0.828627 0 50.2615 GTEX-T5JC-0426-SM-5S2SL 1 C1 6 pieces up to 8x3 mm; no subcutaneous adipose 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 663 828 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0526-SM-32PM7 1 C1 pieces 8x7 & 7x5 mm; 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 666 826 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.765438 218325 0.973396 0.7703 0.83207 22050 1 76 0.00237312 149 0 7.08848e+07 0.0263188 1.18235e+06 9.20223e+07 1.0739e+07 22069 3.50891e+07 0 0.141325 0.7703 0.640944 7.08848e+07 0.00793913 1.55261e+07 1.21601e+07 1.57239e+07 172 1.59026e+07 1.03759e+07 0.00513855 1.57668e+07 49.7855 0.0128485 0.775163 0 50.3165 GTEX-T5JC-0526-SM-5S2SD 1 C1 pieces 8x7 & 7x5 mm; 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 666 826 BP-24623 RNA isolation_PAXgene Tissue miRNA 04/25/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0626-SM-3NMA6 1 C1 2 pieces 9x8 & 9x6 mm; no adipose 8 Muscle Muscle - Skeletal 0011907 669 824 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991517 308220 0.981466 0.993946 0.874536 20865 1 76 0.00359101 269 0 1.1073e+08 0.0183105 1.75335e+06 1.11404e+08 2.13933e+07 20880 5.51154e+07 0 0.10693 0.993946 0.869241 1.1073e+08 0.00483989 2.43565e+07 1.26227e+07 2.43415e+07 319 2.44065e+07 2.25657e+07 0.00421393 2.45398e+07 50.1361 0.0157386 0.996375 0 49.9846 GTEX-T5JC-0626-SM-5S2RW 1 C1 2 pieces 9x8 & 9x6 mm; no adipose 8 Muscle Muscle - Skeletal 0011907 669 824 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0726-SM-4DM55 2 C1 2 pieces 10x6 & 6x6 mm; spermatogenesis 6.2 Testis Testis 0000473 696 797 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986162 653059 0.9165 0.98875 0.704859 31398 1 76 0.00229121 122 0 5.30775e+07 0.083215 566676 5.36814e+07 3.70298e+06 31436 2.63742e+07 0 0.211641 0.98875 0.696929 5.30775e+07 0.00377583 1.08923e+07 1.66571e+07 1.09438e+07 118 1.09889e+07 7.81771e+06 0.00303158 1.09843e+07 49.9895 0.0105563 0.991339 0 50.1178 GTEX-T5JC-0726-SM-5S2SP 2 C1 2 pieces 10x6 & 6x6 mm; spermatogenesis 6.2 Testis Testis 0000473 696 797 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-0826-SM-32PMC 2 C1 2 pieces 7x7 & 6x6 mm; good alveolar structure; bronchial epithelium autolyzed 7.2 Lung Lung 0008952 703 791 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.906526 186701 0.971892 0.910694 0.751489 24258 1 76 0.00268391 158 0 8.83478e+07 0.0277273 406546 9.70116e+07 8.74365e+06 24298 4.37956e+07 0 0.220403 0.910694 0.684376 8.83478e+07 0.00813463 1.93911e+07 1.0803e+07 1.95712e+07 183 1.97118e+07 1.32481e+07 0.0053968 1.963e+07 49.8961 0.0041907 0.914861 0 50.2311 GTEX-T5JC-0826-SM-5S2SN 2 C1 2 pieces 7x7 & 6x6 mm; good alveolar structure; bronchial epithelium autolyzed 7.2 Lung Lung 0008952 703 791 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-1226-SM-4DM7C 1 C1 2 pieces 9x8 & 8x7 mm; all smooth muscle, no glands 6.6 Prostate Prostate 0002367 716 782 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989069 241751 0.968484 0.990789 0.825964 21905 1 76 0.0021169 125 0 5.76207e+07 0.0312637 433853 5.81564e+07 4.07038e+06 21919 2.86708e+07 0 0.14252 0.990789 0.818356 5.76207e+07 0.00348741 1.22842e+07 5.76867e+06 1.23495e+07 143 1.23216e+07 9.44658e+06 0.00280096 1.24096e+07 50.1779 0.00746011 0.992509 0 50.1327 GTEX-T5JC-1526-SM-4DM68 2 C1 6 pieces up to 6x3 mm; all cortex; no underlying chronic renal lesions 5.9 Kidney Kidney - Cortex 0001225 723 776 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-3205 07/23/2013 TruSeq.v1 RNASEQ 0.986653 672324 0.955891 0.98866 0.826287 22152 1 76 0.00197276 266 0 7.6482e+07 0.0439156 6.24476e+06 7.73593e+07 4.17779e+06 22161 3.80533e+07 0 0.129604 0.98866 0.816917 7.6482e+07 0.00306789 1.67954e+07 2.69966e+07 1.69127e+07 267 1.68131e+07 7.72805e+06 0.00251921 1.70543e+07 50.3561 0.0807241 0.990668 0 50.1741 GTEX-T5JC-1626-SM-EZ6KW 2 C1 2 pieces 9x6 & 6x6 mm; all medulla, no cortex, many red cell casts 5.9 Kidney Kidney - Medulla 0001293 725 775 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987205 200437 0.973118 0.988659 0.820949 24550 1 76 0.0024053 272 0 1.00041e+08 0.0266809 6.23659e+06 1.01189e+08 7.32809e+06 24581 4.98593e+07 0 0.15217 0.988659 0.811638 1.00041e+08 0.00361168 2.22047e+07 9.77198e+06 2.23525e+07 315 2.23465e+07 1.40356e+07 0.0030076 2.23459e+07 49.9994 0.0616332 0.990112 0 50.1659 GTEX-T5JC-1726-SM-4DM6U 1 C1 6 pieces up to 7x2 mm; slight autolysis of glands; epithelium fine 8.7 Esophagus Esophagus - Mucosa 0006920 727 774 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987308 637528 0.954116 0.989918 0.723126 21934 1 76 0.00229704 124 0 6.40267e+07 0.0456696 360163 6.46788e+07 4.70002e+06 21951 3.1839e+07 0 0.230991 0.989918 0.715835 6.40267e+07 0.00368197 1.4102e+07 2.05916e+07 1.41655e+07 135 1.42275e+07 1.00818e+07 0.00298768 1.42187e+07 49.9845 0.00556849 0.992529 0 50.1122 GTEX-T5JC-1826-SM-4DM6E 1 C1 6 pieces up to 8x3 mm; good clean muscular specimens 7 Esophagus Esophagus - Muscularis 0004648 729 773 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98635 336063 0.971604 0.988699 0.802394 21619 1 76 0.0022399 123 0 5.77736e+07 0.0281319 643302 5.8434e+07 4.37389e+06 21634 2.87122e+07 0 0.16921 0.988699 0.793327 5.77736e+07 0.00362646 1.24564e+07 6.73196e+06 1.25052e+07 141 1.25173e+07 9.05363e+06 0.00293154 1.25774e+07 50.1197 0.011009 0.991049 0 50.0979 GTEX-T5JC-1926-SM-4DM6Q 2 C1 6 pieces up to 10x2.5 mm; 6.6 Stomach Stomach 0000945 731 772 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.985677 282787 0.969556 0.987497 0.803593 21865 1 76 0.00216998 132 0 5.21753e+07 0.030216 615151 5.28359e+07 3.65967e+06 21881 2.59506e+07 0 0.165964 0.987497 0.793545 5.21753e+07 0.00357579 1.13645e+07 9.35002e+06 1.13962e+07 133 1.13926e+07 8.06778e+06 0.00287158 1.14647e+07 50.1577 0.0116427 0.989317 0 50.0697 GTEX-T5JC-2026-SM-32PMM 2 C1 2 pieces 6x5 & 7x6 mm; 7.9 Thyroid Thyroid 0002046 732 772 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 TruSeq.v1 EXCLUDE 0.622149 30915 0.976398 0.655983 0.76934 19588 1 76 0.00419807 146 0 3.97168e+07 0.0233655 82230 6.05455e+07 7.83971e+06 19596 1.8818e+07 0 0.207058 0.655983 0.504674 3.97168e+07 0.185033 8.33428e+06 4.95133e+06 8.54976e+06 218 9.36531e+06 5.32464e+06 0.0899522 9.27143e+06 49.7481 0.00135815 0.689817 0 50.6381 GTEX-T5JC-2026-SM-5S2TJ 2 C1 2 pieces 6x5 & 7x6 mm; 7.9 Thyroid Thyroid 0002046 732 772 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T5JC-2126-SM-32PMO 2 C1 2 pieces 10x8 & 10x7 mm; gynecomastia with ~50-60% fibrous tissue containing ducts and the remainder adipose 6.9 Breast Breast - Mammary Tissue 0008367 734 770 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.971078 187181 0.969694 0.974143 0.717042 26686 1 76 0.00250072 283 0 1.28819e+08 0.0299595 441931 1.32238e+08 1.09424e+07 26755 6.39769e+07 0 0.252652 0.974143 0.698501 1.28819e+08 0.00762808 2.8378e+07 1.20152e+07 2.85074e+07 305 2.86501e+07 1.90171e+07 0.00505634 2.86178e+07 49.9718 0.00334193 0.977207 0 50.1138 GTEX-T5JC-2326-SM-32PMR 2 C1 4 pieces up to 4x4 mm; 2 pieces have meninges attached 7.8 Brain Brain - Cerebellum 0002037 740 768 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.978076 513914 0.942094 0.981304 0.704993 23964 1 76 0.00263779 151 0 9.01037e+07 0.0575102 975392 9.18203e+07 7.01577e+06 23998 4.47279e+07 0 0.237102 0.981304 0.691812 9.01037e+07 0.00772528 1.93611e+07 2.10512e+07 1.94717e+07 182 1.95764e+07 1.14929e+07 0.00517317 1.95309e+07 49.9418 0.0106228 0.984533 0 50.1424 GTEX-T5JC-2426-SM-3NMDB 2 C1 4 pieces up to 4x4 mm; one piece has meninges and vessels in a sulcus 7 Brain Brain - Cortex 0001870 743 766 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990221 503724 0.960711 0.992625 0.8403 24227 1 76 0.0029043 269 0 9.53255e+07 0.0388384 2.5949e+06 9.60337e+07 1.16805e+07 24241 4.74214e+07 0 0.120411 0.992625 0.834103 9.53255e+07 0.00433788 2.0975e+07 1.66991e+07 2.10073e+07 325 2.10227e+07 1.24395e+07 0.00361935 2.1177e+07 50.1829 0.0270207 0.995029 0 50.0385 GTEX-T5JC-2526-SM-4DM6G 2 C1 1 piece 5x5 mm; anterior 7.4 Pituitary Pituitary 0000007 738 771 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987408 712574 0.946677 0.989365 0.76856 22609 1 76 0.00210727 114 0 5.44929e+07 0.0530718 118728 5.50787e+07 3.84613e+06 22630 2.70984e+07 0 0.178117 0.989365 0.760387 5.44929e+07 0.00355738 1.12633e+07 2.05367e+07 1.13181e+07 119 1.13612e+07 9.50008e+06 0.00283089 1.13462e+07 49.967 0.00215561 0.991321 0 50.1213 GTEX-T5JW-0002-SM-3G3SN B1 Blood Whole Blood 0013756 -299 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840002_R02C01 GTEX-T5JW-0002-SM-3G3TO B1 Blood Whole Blood 0013756 -299 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R06C01 GTEX-T5JW-0002-SM-3UZEZ B1 Blood Whole Blood 0013756 -299 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-T5JW-0002-SM-5URDG B1 Blood Whole Blood 0013756 -299 BP-23365 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/26/2012 LCSET-5270,LCSET-5432 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T5JW-0003-SM-3NMAD B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -299 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991576 1.0776e+06 0.969398 0.993675 0.84324 22253 1 76 0.00402185 287 0 1.15122e+08 0.0296788 865848 1.15854e+08 2.20387e+07 22286 5.72498e+07 0 0.126158 0.993675 0.837906 1.15122e+08 0.00504641 2.56378e+07 2.0452e+07 2.57123e+07 275 2.58211e+07 2.78892e+07 0.00453305 2.57737e+07 49.9541 0.00747359 0.995773 0 50.0726 GTEX-T5JW-0005-SM-3GADE B1 7.4 Blood Whole Blood 0013756 -299 BP-23374 RNA isolation_PAXgene Blood RNA (Manual) 03/26/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.960096 743144 0.953351 0.964671 0.79759 19361 1 76 0.00302729 136 0 8.9663e+07 0.0459342 247277 9.29467e+07 1.4079e+07 19380 4.44776e+07 0 0.155761 0.964671 0.769412 8.9663e+07 0.0105286 1.91651e+07 4.5242e+07 1.95543e+07 167 1.96807e+07 1.71372e+07 0.00676018 1.94357e+07 49.6867 0.00266042 0.969245 0 50.5026 GTEX-T5JW-0008-SM-4DM5X B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 235 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.992186 444307 0.967336 0.99381 0.838659 20088 1 76 0.00185273 149 0 6.34426e+07 0.0322486 205476 6.38378e+07 4.19801e+06 20099 3.15954e+07 0 0.128677 0.99381 0.833468 6.34426e+07 0.00307533 1.40419e+07 1.19946e+07 1.40931e+07 142 1.41481e+07 1.36458e+07 0.00246303 1.40865e+07 49.891 0.00321872 0.995434 0 50.091 GTEX-T5JW-0126-SM-4DM6K 1 B1 2 pieces, ~8x7mm. 7.3 Spleen Spleen 0002106 130 983 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.975552 797914 0.941309 0.978303 0.775401 22924 1 76 0.00266716 126 0 5.92627e+07 0.0580658 281407 6.05771e+07 4.39259e+06 22939 2.94138e+07 0 0.165908 0.978303 0.758577 5.92627e+07 0.00415728 1.26665e+07 2.15867e+07 1.27513e+07 138 1.27985e+07 9.28691e+06 0.00341013 1.27995e+07 50.002 0.00464544 0.981053 0 50.1668 GTEX-T5JW-0226-SM-4DM7I 1 B1 2 pieces, ~8x8mm, Islets of Langherhans viislble, encircled 8.3 Pancreas Pancreas 0001150 137 977 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989929 436801 0.973868 0.992037 0.855753 21050 1 76 0.00218524 104 0 5.85087e+07 0.0257502 151291 5.89784e+07 4.03693e+06 21061 2.91038e+07 0 0.118115 0.992037 0.848939 5.85087e+07 0.00356722 1.33482e+07 1.5837e+07 1.34145e+07 113 1.33954e+07 1.6942e+07 0.00287476 1.35002e+07 50.1948 0.00256519 0.994144 0 50.1238 GTEX-T5JW-0326-SM-4DM6J 1 B1 2 pieces fallopian tube not ovary, may be used once label corrected 8.1 Fallopian Tube Fallopian Tube 0003889 150 965 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989986 344984 0.968881 0.992025 0.799897 23669 1 76 0.00208913 139 0 6.87659e+07 0.0306706 145241 6.93187e+07 4.73299e+06 23697 3.4215e+07 0 0.168984 0.992025 0.793518 6.87659e+07 0.00339546 1.49546e+07 7.16092e+06 1.50018e+07 157 1.50163e+07 1.19306e+07 0.00274095 1.50787e+07 50.1038 0.00209526 0.994064 0 50.0788 GTEX-T5JW-0426-SM-4DM7M 1 B1 2 pieces ovary not fallopian tube, may be used once label corrected 6.8 Ovary Ovary 0000992 153 963 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986879 458162 0.955041 0.988784 0.727539 23576 1 76 0.00214874 147 0 7.62422e+07 0.0447741 131375 7.7107e+07 5.65653e+06 23619 3.79154e+07 0 0.227502 0.988784 0.719379 7.62422e+07 0.00352519 1.65135e+07 1.2493e+07 1.66082e+07 165 1.66257e+07 1.18832e+07 0.00283564 1.66441e+07 50.0276 0.0017038 0.99069 0 50.143 GTEX-T5JW-0726-SM-4DM6D 1 B1 6 pieces, ~ 8x6mm both endo and ectocervial mucosa, well preserved, representative endocervical glands encircled 7.5 Cervix Uteri Cervix - Ectocervix 0012249 175 943 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988395 390065 0.957225 0.990613 0.770491 22299 1 76 0.00213323 115 0 5.36308e+07 0.0425496 116421 5.4139e+07 3.78652e+06 22315 2.66796e+07 0 0.186734 0.990613 0.763259 5.36308e+07 0.00355402 1.17042e+07 1.45409e+07 1.1812e+07 122 1.18439e+07 9.06483e+06 0.00284203 1.17922e+07 49.8905 0.00215041 0.992831 0 50.2293 GTEX-T5JW-0826-SM-EYYVD 1 B1 6 pieces, ~8x5mm, no glands 5.9 Cervix Uteri Cervix - Endocervix 0000458 180 938 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989123 209794 0.961259 0.991745 0.742226 25835 1 76 0.00212608 279 0 9.58787e+07 0.0384963 164419 9.66767e+07 3.27244e+06 25890 4.7714e+07 0 0.219033 0.991745 0.736099 9.58787e+07 0.00336711 2.08876e+07 8.61633e+06 2.11107e+07 267 2.11333e+07 1.52068e+07 0.00274495 2.10979e+07 49.9582 0.00170071 0.994367 0 50.2656 GTEX-T5JW-0926-SM-4DM5K 1 B1 6 pieces, ~8x3mm mucosa well preserved, ~30-40% thickness 5.7 Stomach Stomach 0000945 185 934 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.981807 247674 0.979112 0.984965 0.867162 20700 1 76 0.00204917 282 0 6.07436e+07 0.0206872 614084 6.16709e+07 4.38357e+06 20711 3.01709e+07 0 0.111951 0.984965 0.854124 6.07436e+07 0.00356105 1.38523e+07 6.46741e+07 1.41164e+07 202 1.41336e+07 1.43725e+07 0.00280269 1.40273e+07 49.8113 0.00995744 0.988123 0 50.4721 GTEX-T5JW-1026-SM-EZ6LR 2 B1 6 pieces mucosa, ~ 6x3mm sloughed mucosa: not vagina but additional bladder. May be used as such when relabled 5.9 Bladder Bladder 0001255 195 925 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990561 284027 0.974247 0.992204 0.809571 25511 1 76 0.00244401 282 0 1.175e+08 0.025286 437251 1.18423e+08 8.77731e+06 25554 5.85438e+07 0 0.164675 0.992204 0.80326 1.175e+08 0.00372568 2.59781e+07 1.0935e+07 2.61698e+07 321 2.61654e+07 1.99969e+07 0.00308378 2.61599e+07 49.9948 0.00369228 0.993847 0 50.1838 GTEX-T5JW-1126-SM-4DM5V 1 B1 6 pieces '9x3mm, partially detached mucosa, '10% of thickness 7 Colon Colon - Transverse 0001157 200 920 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987848 329840 0.971485 0.990163 0.835121 22140 1 76 0.00254541 160 0 6.79811e+07 0.0261018 867331 6.86564e+07 5.02076e+06 22162 3.37372e+07 0 0.136364 0.990163 0.826906 6.79811e+07 0.00381195 1.51859e+07 1.04519e+07 1.52025e+07 175 1.51864e+07 1.05303e+07 0.0031772 1.5343e+07 50.2565 0.0126329 0.992478 0 50.0274 GTEX-T5JW-1226-SM-3GACY 1 B1 2 pieces ~8x6mm, focal areas of active Hashimoto's thyroiditis, areas of fibrous regression and scarring 6.5 Thyroid Thyroid 0002046 210 911 BP-26022 RNA isolation_PAXgene Tissue miRNA 06/06/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.970138 244008 0.961043 0.97431 0.71761 24079 1 76 0.00246076 120 0 6.84991e+07 0.0387052 189388 7.03052e+07 9.27661e+06 24120 3.40113e+07 0 0.243433 0.97431 0.699175 6.84991e+07 0.00887027 1.48289e+07 8.30543e+06 1.5022e+07 142 1.5108e+07 9.28424e+06 0.00565179 1.50139e+07 49.8439 0.0026938 0.978483 0 50.3235 GTEX-T5JW-1326-SM-4DM5G 1 B1 6 pieces, ~5x2.5mm, squamous mucosa is ~5-10% thickness 8.3 Esophagus Esophagus - Mucosa 0006920 215 907 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988591 470472 0.973257 0.9911 0.847964 20881 1 76 0.00210021 138 0 6.52563e+07 0.026342 240946 6.58423e+07 4.56893e+06 20894 3.24594e+07 0 0.125293 0.9911 0.840417 6.52563e+07 0.00345151 1.46951e+07 1.24699e+07 1.4719e+07 152 1.47721e+07 1.30993e+07 0.00277415 1.48071e+07 50.0591 0.00365944 0.993608 0 50.0405 GTEX-T5JW-1426-SM-4DM5Q 1 B1 6 pieces, ~ 7x2.5mm 8.3 Esophagus Esophagus - Muscularis 0004648 220 903 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990328 450326 0.973314 0.992162 0.840398 21743 1 76 0.00197515 167 0 7.37491e+07 0.0264253 521435 7.43317e+07 5.18581e+06 21758 3.67036e+07 0 0.132916 0.992162 0.833811 7.37491e+07 0.0033226 1.58941e+07 7.53742e+06 1.5909e+07 187 1.58926e+07 1.26195e+07 0.00264763 1.60412e+07 50.2327 0.00701497 0.993997 0 50.0234 GTEX-T5JW-1526-SM-4DM5E 1 B1 2 pieces, ~ 8x7mm, one with layer of proliferative endometrium along one edge, well- preserved 8.1 Uterus Uterus 0000995 235 889 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990198 357256 0.966795 0.99203 0.790535 21906 1 76 0.0020755 115 0 5.28571e+07 0.0329215 86310 5.32818e+07 3.71398e+06 21930 2.62982e+07 0 0.176261 0.99203 0.784234 5.28571e+07 0.0034326 1.14145e+07 5.80219e+06 1.145e+07 121 1.14532e+07 9.27113e+06 0.0027528 1.1509e+07 50.1213 0.00161988 0.993861 0 50.0778 GTEX-T5JW-1626-SM-3GADZ 0 B1 6 pieces, ~ 7.5x3mm, squamous epithelium is ~2-3% of thickness 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 235 891 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.970496 268735 0.963154 0.975574 0.795599 23309 1 76 0.00255069 177 0 8.2014e+07 0.0366125 401487 8.40675e+07 1.21179e+07 23338 4.06782e+07 0 0.167556 0.975574 0.776166 8.2014e+07 0.00958663 1.75436e+07 1.37131e+07 1.78749e+07 185 1.8005e+07 1.27783e+07 0.00605035 1.78128e+07 49.7317 0.00477577 0.980653 0 50.4677 GTEX-T5JW-1726-SM-3GADN 0 B1 2 pieces, ~ 10x7mm 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 240 887 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.980993 506877 0.975822 0.98563 0.848452 24309 1 76 0.00243552 523 0 1.60031e+08 0.0238982 1.15756e+06 1.62364e+08 2.28442e+07 24343 7.9422e+07 0 0.12737 0.98563 0.83626 1.60031e+08 0.00924577 3.49417e+07 1.76973e+07 3.57581e+07 489 3.5931e+07 2.60634e+07 0.00582462 3.54758e+07 49.6812 0.0071294 0.990267 0 50.5773 GTEX-T5JW-1826-SM-3GAE1 0 B1 2 pieces, ~7x7mm, minimal interstital fat 7.2 Muscle Muscle - Skeletal 0011907 243 885 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.975396 220862 0.981829 0.979791 0.879864 21044 1 76 0.00228763 208 0 1.01004e+08 0.0179963 1.17744e+06 1.03088e+08 1.46987e+07 21055 5.01631e+07 0 0.101965 0.979791 0.862083 1.01004e+08 0.00920466 2.22006e+07 9.59199e+06 2.2584e+07 235 2.26854e+07 1.92992e+07 0.00573064 2.25053e+07 49.8007 0.0114217 0.984185 0 50.428 GTEX-T5JW-2026-SM-4DM63 1 B1 2 pieces 10x7mm, representative TDLUs encircled 6.5 Breast Breast - Mammary Tissue 0008367 255 874 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987777 359846 0.96711 0.989775 0.791397 23338 1 76 0.00212764 114 0 5.31151e+07 0.0325043 156244 5.36638e+07 3.69432e+06 23357 2.64186e+07 0 0.175713 0.989775 0.783306 5.31151e+07 0.00352389 1.17258e+07 6.03515e+06 1.17549e+07 128 1.17734e+07 8.62261e+06 0.00282436 1.18128e+07 50.0836 0.00291154 0.991773 0 50.0619 GTEX-T5JW-2126-SM-EZ6LE 0 B1 2 pieces 3mm, good clean specimens. One addtional small fragment 5.7 Blood Vessel Artery - Tibial 0007610 275 855 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988568 246246 0.975887 0.990247 0.851794 22215 1 76 0.00233702 276 0 9.51514e+07 0.0238114 445451 9.60886e+07 7.47963e+06 22232 4.74108e+07 0 0.124093 0.990247 0.843486 9.51514e+07 0.00377312 2.05667e+07 7.83322e+06 2.06819e+07 315 2.06268e+07 1.74953e+07 0.00305385 2.07739e+07 50.1777 0.00463584 0.991927 0 50.1396 GTEX-T6MN-0002-SM-3NMAH C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 564 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990628 907118 0.964146 0.992885 0.810269 22547 1 76 0.00379094 221 0 1.09262e+08 0.0354234 649031 1.10045e+08 2.19551e+07 22584 5.43324e+07 0 0.153877 0.992885 0.804504 1.09262e+08 0.00478738 2.41898e+07 2.10683e+07 2.41946e+07 237 2.43052e+07 2.47337e+07 0.00428803 2.4327e+07 50.0224 0.00589787 0.995143 0 50.005 GTEX-T6MN-0002-SM-5S2TI C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 564 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0003-SM-325AF C1 Blood Whole Blood 0013756 564 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003117_R02C01 GTEX-T6MN-0003-SM-325HW C1 Blood Whole Blood 0013756 564 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R04C02 GTEX-T6MN-0003-SM-3USRL C1 Blood Whole Blood 0013756 564 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-T6MN-0003-SM-5URB7 C1 Blood Whole Blood 0013756 564 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 LCSET-5270,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T6MN-0005-SM-32PLJ C1 7.8 Blood Whole Blood 0013756 564 BP-23434 RNA isolation_PAXgene Blood RNA (Manual) 03/27/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.909671 333968 0.98311 0.912762 0.80491 17956 1 76 0.00244823 92 0 9.01867e+07 0.0146926 161265 9.88064e+07 9.11418e+06 17960 4.47612e+07 0 0.1782 0.912762 0.734691 9.01867e+07 0.00879553 2.10755e+07 1.76663e+08 2.1873e+07 116 2.19032e+07 2.64453e+07 0.00561113 2.13786e+07 49.394 0.00163213 0.915853 0 50.9285 GTEX-T6MN-0005-SM-5S2T2 C1 7.8 Blood Whole Blood 0013756 564 BP-23434 RNA isolation_PAXgene Blood RNA (Manual) 03/27/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0008-SM-4DM7H C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 690 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990666 494274 0.966013 0.992635 0.836335 19506 1 76 0.00198127 135 0 5.12351e+07 0.0335806 139797 5.16153e+07 3.62329e+06 19519 2.54994e+07 0 0.129678 0.992635 0.830176 5.12351e+07 0.00324205 1.13304e+07 1.03499e+07 1.13596e+07 115 1.14116e+07 1.11061e+07 0.00261041 1.13767e+07 49.9233 0.00270844 0.994604 0 50.0644 GTEX-T6MN-0011-R10A-SM-32QP7 C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.922658 224367 0.965736 0.927211 0.845196 25315 1 76 0.00248223 373 0 1.18246e+08 0.0336681 2.6759e+06 1.27529e+08 1.82824e+07 25341 5.86334e+07 0 0.120541 0.927211 0.783674 1.18246e+08 0.0077293 2.58092e+07 1.0024e+07 2.6107e+07 384 2.62577e+07 1.6873e+07 0.00509289 2.61845e+07 49.9302 0.0209827 0.931764 0 50.2868 GTEX-T6MN-0011-R10A-SM-5S2SB C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0011-R11A-SM-32QOX C1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.976051 407449 0.94533 0.979679 0.710096 25101 1 76 0.00256307 205 0 1.08239e+08 0.054169 936416 1.10484e+08 1.39133e+07 25142 5.37007e+07 0 0.235234 0.979679 0.695666 1.08239e+08 0.00780944 2.32378e+07 1.56832e+07 2.33291e+07 235 2.34085e+07 1.3841e+07 0.00517654 2.3522e+07 50.1209 0.00847554 0.983308 0 50.0981 GTEX-T6MN-0011-R11A-SM-5S2TH C1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0011-R1A-SM-32QOY C1, A1 6.4 Brain Brain - Hippocampus 0001954 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.92484 703131 0.963123 0.931606 0.843496 24701 1 76 0.00254844 248 0 9.44436e+07 0.0364838 4.48948e+06 1.01377e+08 1.49381e+07 24727 4.67095e+07 0 0.119627 0.931606 0.785806 9.44436e+07 0.00833575 2.05114e+07 1.08682e+07 2.1054e+07 261 2.11037e+07 1.18875e+07 0.00542108 2.10834e+07 49.9759 0.044285 0.938371 0 50.6528 GTEX-T6MN-0011-R2A-SM-32QOW C1, A1 6.1 Brain Brain - Substantia nigra 0002038 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.938903 205604 0.969916 0.943942 0.848152 24503 1 76 0.00280138 256 0 9.99425e+07 0.0297154 6.38918e+06 1.05878e+08 1.55327e+07 24538 4.95352e+07 0 0.121765 0.943942 0.800606 9.99425e+07 0.00923584 2.21951e+07 9.43291e+06 2.25792e+07 282 2.25202e+07 1.24995e+07 0.00600144 2.27364e+07 50.2389 0.0603449 0.948981 0 50.4289 GTEX-T6MN-0011-R4A-SM-32QPG C1, A1 7.4 Brain Brain - Amygdala 0001876 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.419438 78177 0.965786 0.423355 0.852181 21598 1 76 0.00264241 99 0 3.93348e+07 0.033861 3.04901e+06 9.29119e+07 1.74158e+07 21607 1.93276e+07 0 0.113606 0.423355 0.360775 3.93348e+07 0.00846936 8.56238e+06 5.31565e+06 8.78201e+06 119 8.88508e+06 3.83248e+06 0.00552893 8.79327e+06 49.7403 0.0328161 0.427272 0 50.6332 GTEX-T6MN-0011-R5A-SM-32QPD C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.91845 264880 0.962973 0.922657 0.843716 25646 1 76 0.00264547 375 0 1.30859e+08 0.0364989 6.85493e+06 1.41829e+08 2.0042e+07 25688 6.49281e+07 0 0.119257 0.922657 0.77846 1.30859e+08 0.00748307 2.85063e+07 1.66033e+07 2.89977e+07 368 2.91086e+07 1.73625e+07 0.00505324 2.89226e+07 49.8398 0.0483323 0.926864 0 50.4273 GTEX-T6MN-0011-R6A-SM-32QP8 C1, A1 8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.893259 240670 0.960907 0.898219 0.82877 25275 1 76 0.00251583 270 0 1.00948e+08 0.0386613 4.05936e+06 1.12387e+08 1.71071e+07 25314 5.00197e+07 0 0.132137 0.898219 0.744417 1.00948e+08 0.007924 2.1888e+07 1.06961e+07 2.22193e+07 278 2.23132e+07 1.29276e+07 0.00520498 2.22971e+07 49.9819 0.0361195 0.90318 0 50.3755 GTEX-T6MN-0011-R7A-SM-32QP5 C1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.948502 649533 0.958923 0.955651 0.829347 24259 1 76 0.00258948 168 0 8.00573e+07 0.0406821 3.45319e+06 8.37725e+07 1.19778e+07 24282 3.95933e+07 0 0.129576 0.955651 0.792567 8.00573e+07 0.00823828 1.73145e+07 1.08371e+07 1.75635e+07 209 1.77215e+07 1.01843e+07 0.00539275 1.76978e+07 49.9666 0.0412211 0.962801 0 50.3571 GTEX-T6MN-0011-R8A-SM-32QP3 C1, A1 6.7 Brain Brain - Hypothalamus 0001898 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.911298 275339 0.962239 0.916389 0.836728 24131 1 76 0.00272866 198 0 8.62262e+07 0.0373628 4.47241e+06 9.40934e+07 1.39211e+07 24160 4.27226e+07 0 0.125511 0.916389 0.766769 8.62262e+07 0.0088972 1.89346e+07 1.11362e+07 1.93126e+07 225 1.92194e+07 1.12047e+07 0.00579579 1.94624e+07 50.3141 0.0475316 0.92148 0 50.4941 GTEX-T6MN-0011-R9A-SM-32QOZ C1, A1 7.1 Brain Brain - Spinal cord (cervical c-1) 0006469 570 BP-24029 RNA isolation_PAXgene Tissue miRNA 04/11/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.98132 252268 0.96308 0.985532 0.839485 22764 1 76 0.0026378 267 0 1.02013e+08 0.0365688 5.99241e+06 1.0351e+08 1.35189e+07 22786 5.06316e+07 0 0.123596 0.985532 0.827339 1.02013e+08 0.00862369 2.22612e+07 1.33987e+07 2.35023e+07 292 2.31265e+07 1.21603e+07 0.00561795 2.30143e+07 49.8784 0.0578919 0.989744 0 51.356 GTEX-T6MN-0126-SM-32PLP 1 C1 6 pieces up to 8x5mm; thin layer of subcutaneous adipose 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 689 899 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.95197 145348 0.973262 0.955438 0.818925 23318 1 76 0.00254296 221 0 8.71167e+07 0.0263922 310920 9.11798e+07 8.04988e+06 23341 4.32614e+07 0 0.154337 0.955438 0.782432 8.71167e+07 0.00815754 1.88626e+07 1.13266e+07 1.89497e+07 188 1.90701e+07 1.60258e+07 0.00534006 1.90404e+07 49.9611 0.00340997 0.958907 0 50.1151 GTEX-T6MN-0126-SM-5S2TD 1 C1 6 pieces up to 8x5mm; thin layer of subcutaneous adipose 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 689 899 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0226-SM-32PMD 1 C1 2 pieces 9x6 & 9x8 mm; few central artifacts 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 692 896 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.960671 197536 0.973446 0.963538 0.801975 24789 1 76 0.00245671 276 0 1.14076e+08 0.0262109 485714 1.18393e+08 1.21601e+07 24831 5.66983e+07 0 0.171471 0.963538 0.772733 1.14076e+08 0.00764221 2.49648e+07 1.17252e+07 2.52741e+07 268 2.53699e+07 1.96565e+07 0.00504174 2.51878e+07 49.8199 0.00410255 0.966405 0 50.3078 GTEX-T6MN-0226-SM-5S2SO 1 C1 2 pieces 9x6 & 9x8 mm; few central artifacts 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 692 896 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0326-SM-32PMK 1 C1 2 pieces 5x4 & 5x3 mm; ~30% adipose amongst nerve bundles 7.1 Nerve Nerve - Tibial 0001323 735 854 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.979216 193632 0.963875 0.982169 0.749455 26171 1 76 0.00248953 268 0 1.1694e+08 0.0358314 360314 1.19063e+08 9.90538e+06 26230 5.80952e+07 0 0.21442 0.982169 0.736092 1.1694e+08 0.00772089 2.55376e+07 1.10588e+07 2.57448e+07 258 2.58334e+07 1.78171e+07 0.00509735 2.57746e+07 49.943 0.00302626 0.985123 0 50.202 GTEX-T6MN-0426-SM-32PMF 1 C1 2 pieces ~2mm arteries & smaller branches; ~20% adipose amongst one aliquot 7.7 Blood Vessel Artery - Tibial 0007610 740 849 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.527419 40673 0.970304 0.53238 0.810581 19849 1 76 0.00243837 111 0 3.13981e+07 0.0293198 108583 5.89768e+07 6.824e+06 19856 1.54597e+07 0 0.159724 0.53238 0.431537 3.13981e+07 0.00871167 6.58867e+06 2.60701e+06 6.71061e+06 109 6.8252e+06 5.83586e+06 0.00554579 6.74807e+06 49.7159 0.00184111 0.537341 0 50.4585 GTEX-T6MN-0426-SM-5S2SU 1 C1 2 pieces ~2mm arteries & smaller branches; ~20% adipose amongst one aliquot 7.7 Blood Vessel Artery - Tibial 0007610 740 849 BP-24678 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0526-SM-32PMS 1 C1 2 pieces 8x6 & 8x7 mm; one has ~10% embedded adipose 8.5 Muscle Muscle - Skeletal 0011907 743 847 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.474643 65853 0.978894 0.478863 0.866878 18469 1 76 0.00229778 94 0 3.34969e+07 0.0208412 325163 6.99508e+07 8.07458e+06 18474 1.64725e+07 0 0.112016 0.478863 0.415116 3.34969e+07 0.00858035 7.16722e+06 3.22167e+06 7.34775e+06 105 7.47128e+06 7.12312e+06 0.00541138 7.31677e+06 49.4776 0.00464845 0.483084 0 50.6219 GTEX-T6MN-0626-SM-32PM9 1 C1 2 pieces 7x6 & 7x5 mm; minimal extraneous adipose 7.3 Thyroid Thyroid 0002046 811 780 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.974517 256793 0.962266 0.977408 0.702406 25991 1 76 0.00265736 160 0 1.00618e+08 0.0373958 181644 1.02944e+08 8.27473e+06 26051 4.99687e+07 0 0.25986 0.977408 0.686537 1.00618e+08 0.00775259 2.19114e+07 1.27082e+07 2.19945e+07 185 2.2116e+07 1.54409e+07 0.00519744 2.20708e+07 49.9489 0.0017645 0.980299 0 50.0946 GTEX-T6MN-0626-SM-5S2SS 1 C1 2 pieces 7x6 & 7x5 mm; minimal extraneous adipose 7.3 Thyroid Thyroid 0002046 811 780 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0726-SM-32PML 1 C1 2 pieces 12x8 & 12x5 mm; mammary ducts present; adipose comprises 70 to 90% of aliquots 7.4 Breast Breast - Mammary Tissue 0008367 816 775 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.912174 258726 0.963147 0.914038 0.711821 26865 1 76 0.00249921 204 0 1.0748e+08 0.0365511 434118 1.17588e+08 1.00008e+07 26932 5.33539e+07 0 0.251327 0.914038 0.650631 1.0748e+08 0.00723733 2.35888e+07 1.13408e+07 2.36967e+07 215 2.37668e+07 1.57072e+07 0.00486344 2.37224e+07 49.9533 0.00369185 0.915902 0 50.1141 GTEX-T6MN-0826-SM-32PM4 1 C1 2 pieces 11x6 & 10x8 mm; heart failure cells 6.4 Lung Lung 0008952 818 774 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.911712 148135 0.970392 0.916258 0.778481 23608 1 76 0.00279897 131 0 6.86379e+07 0.028903 252584 7.4911e+07 6.87214e+06 23632 3.40095e+07 0 0.191911 0.916258 0.713289 6.86379e+07 0.00798545 1.50612e+07 8.08257e+06 1.51785e+07 145 1.53044e+07 1.08892e+07 0.00537934 1.5261e+07 49.9291 0.00337179 0.920805 0 50.194 GTEX-T6MN-0826-SM-5S2SK 1 C1 2 pieces 11x6 & 10x8 mm; heart failure cells 6.4 Lung Lung 0008952 818 774 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-0926-SM-32PLX 1 C1 2 pieces 9x8 & 7x7 mm; patchy fibrosis, enlarged nuclei, hypertrophied muscle fibers; <1mm adipose along one edge 7.6 Heart Heart - Left Ventricle 0006566 820 773 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.941832 149273 0.977618 0.94552 0.809346 23083 1 76 0.00254856 156 0 8.74655e+07 0.0221438 2.12965e+06 9.25052e+07 8.01768e+06 23114 4.34421e+07 0 0.168272 0.94552 0.765252 8.74655e+07 0.00797953 1.92815e+07 8.99645e+06 1.94294e+07 184 1.95474e+07 1.42506e+07 0.00525345 1.94693e+07 49.8998 0.023022 0.949208 0 50.1911 GTEX-T6MN-0926-SM-5S2S3 1 C1 2 pieces 9x8 & 7x7 mm; patchy fibrosis, enlarged nuclei, hypertrophied muscle fibers; <1mm adipose along one edge 7.6 Heart Heart - Left Ventricle 0006566 820 773 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-1126-SM-4DM71 1 C1 6 pieces up to 10x1.4 mm; loose adventitia along one side of 4 pieces 7.3 Blood Vessel Artery - Aorta 0001496 829 766 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.984604 433547 0.967636 0.987755 0.765102 22850 1 76 0.00238541 140 0 7.35102e+07 0.0319002 137551 7.44215e+07 5.5646e+06 22877 3.6498e+07 0 0.202534 0.987755 0.755733 7.35102e+07 0.00381477 1.57862e+07 9.51052e+06 1.58426e+07 158 1.59317e+07 1.244e+07 0.00309781 1.59261e+07 49.9913 0.00184827 0.990907 0 50.0891 GTEX-T6MN-1226-SM-3NMA5 1 C1 2 pieces 8x7 & 8x7 mm; large vessel runs through one piece; central congestion 6.7 Liver Liver 0001114 832 764 BP-24680 RNA isolation_PAXgene Tissue miRNA 04/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988802 254970 0.970341 0.991528 0.80358 22912 1 76 0.00426248 197 0 9.14584e+07 0.0294872 1.70536e+06 9.22398e+07 1.80526e+07 22937 4.54671e+07 0 0.166761 0.991528 0.796772 9.14584e+07 0.00548907 2.0047e+07 1.5138e+07 2.00557e+07 243 2.00483e+07 1.11938e+07 0.00487409 2.02839e+07 50.2922 0.0184884 0.994253 0 50.0109 GTEX-T6MN-1526-SM-4DM5P 1 C1 6 pieces up to 7x3 mm; no extraneous adipose 6.7 Esophagus Esophagus - Muscularis 0004648 839 758 BP-24833 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98726 281004 0.967043 0.989243 0.787577 22415 1 76 0.00236898 126 0 6.41733e+07 0.0327462 696208 6.48711e+07 4.76427e+06 22438 3.19189e+07 0 0.179466 0.989243 0.779105 6.41733e+07 0.00375491 1.36973e+07 6.61986e+06 1.37371e+07 151 1.37351e+07 9.11335e+06 0.00306055 1.38233e+07 50.16 0.0107322 0.991227 0 50.0726 GTEX-T6MN-1826-SM-EXOHN 2 C1 6 pieces up to 8x4 mm; all cortex; moderate vascular congestion 5.5 Kidney Kidney - Cortex 0001225 848 752 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98313 260021 0.974079 0.984994 0.871931 23095 1 76 0.00214822 208 0 8.13402e+07 0.0255889 4.94589e+06 8.25794e+07 4.80347e+06 23113 4.0484e+07 0 0.102148 0.984994 0.858847 8.13402e+07 0.00331575 1.80616e+07 9.5764e+06 1.83181e+07 238 1.82704e+07 1.44432e+07 0.00273088 1.82575e+07 49.9824 0.0598925 0.986857 0 50.3525 GTEX-T6MN-2026-SM-4DM7L 2 C1 2 pieces 10x5 & 10x8 mm; spermatogenesis 6.5 Testis Testis 0000473 852 750 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988757 649492 0.911136 0.990497 0.711876 32587 1 76 0.00227596 148 0 7.2601e+07 0.0885109 523598 7.32976e+07 5.02737e+06 32636 3.61244e+07 0 0.19926 0.990497 0.705111 7.2601e+07 0.00361922 1.46971e+07 1.63343e+07 1.46995e+07 142 1.47528e+07 1.17267e+07 0.00294641 1.47706e+07 50.03 0.00714346 0.992237 0 50.0041 GTEX-T6MN-2026-SM-5S2T6 2 C1 2 pieces 10x5 & 10x8 mm; spermatogenesis 6.5 Testis Testis 0000473 852 750 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-T6MN-2126-SM-EZ6LC 3 C1 2 pieces 11x5 & 9x9 mm; glands totally autolyzed in 9x9mm piece; other piece is fibromuscular (both smooth and striated muscle (peripheral to prostatic parenchyma) 5.9 Prostate Prostate 0002367 856 746 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.977963 155901 0.963708 0.979317 0.755634 25186 1 76 0.0027274 205 0 8.53917e+07 0.0360522 1.29659e+06 8.71951e+07 6.39784e+06 25218 4.25347e+07 0 0.208074 0.979317 0.740005 8.53917e+07 0.00384367 1.84863e+07 8.73247e+06 1.86039e+07 232 1.8565e+07 1.12562e+07 0.00328476 1.86374e+07 50.0972 0.01487 0.980672 0 50.1585 GTEX-T6MN-2226-SM-EVYAM 3 C1 6 pieces up to 8x3 mm; epithelium sloughed; one piece 80% adipose 5.5 Bladder Bladder 0001255 857 747 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.987792 337938 0.973637 0.988475 0.800453 23671 1 76 0.00223506 190 0 8.10221e+07 0.0260724 1.12227e+06 8.19668e+07 3.78357e+06 23704 4.03652e+07 0 0.173184 0.988475 0.791228 8.10221e+07 0.0032783 1.78487e+07 7.41854e+06 1.80945e+07 206 1.80225e+07 1.21894e+07 0.00275632 1.79791e+07 49.9398 0.0136918 0.989158 0 50.342 GTEX-T6MN-2526-SM-32PMN 2 C1 4 pieces up to 5x5 mm; 7.3 Brain Brain - Cerebellum 0002037 880 726 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.968078 362464 0.947931 0.971122 0.727311 24442 1 76 0.00271902 155 0 8.77173e+07 0.0517702 1.06986e+06 9.03257e+07 7.43855e+06 24473 4.35499e+07 0 0.22062 0.971122 0.706308 8.77173e+07 0.00784267 1.89513e+07 1.57082e+07 1.90609e+07 184 1.91444e+07 1.08911e+07 0.00527281 1.91235e+07 49.9727 0.0118444 0.974166 0 50.1442 GTEX-T6MN-2626-SM-32PMQ 2 C1 4 pieces up to 5x5 mm; 7 Brain Brain - Cortex 0001870 882 724 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1666 08/31/2012 TruSeq.v1 RNASEQ 0.967197 883299 0.943743 0.970335 0.797268 24886 1 76 0.00256146 267 0 9.88525e+07 0.0558708 3.23186e+06 1.01875e+08 8.2018e+06 24907 4.91299e+07 0 0.146475 0.970335 0.773617 9.88525e+07 0.00779472 2.12069e+07 3.66183e+07 2.15659e+07 267 2.1606e+07 1.16910e+07 0.00516963 2.14552e+07 49.8249 0.0317239 0.973473 0 50.4197 GTEX-T6MN-2726-SM-4DM77 2 C1 2 pieces: 6x4 mm with good parenchyma; 6x1.7 is largely fibrous tissue 7.6 Pituitary Pituitary 0000007 883 724 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988993 441433 0.953051 0.99117 0.774626 23650 1 76 0.00226964 111 0 5.07663e+07 0.0467094 180100 5.12186e+07 3.58699e+06 23673 2.52462e+07 0 0.178425 0.99117 0.767786 5.07663e+07 0.00369814 1.08608e+07 1.12521e+07 1.09037e+07 117 1.09398e+07 8.15504e+06 0.00298232 1.09378e+07 49.9955 0.0035163 0.993348 0 50.0985 GTEX-T6MO-0001-SM-325AL B1 Blood Whole Blood 0013756 -161 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003117_R04C01 GTEX-T6MO-0001-SM-325I3 B1 Blood Whole Blood 0013756 -161 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R06C02 GTEX-T6MO-0001-SM-3UZF7 B1 Blood Whole Blood 0013756 -161 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-T6MO-0001-SM-5URCH B1 Blood Whole Blood 0013756 -161 BP-23464 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/27/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T6MO-0003-SM-3NMAG B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -161 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991802 763230 0.968299 0.993749 0.809297 22328 1 76 0.00393412 283 0 1.15692e+08 0.0313123 631039 1.1642e+08 2.30368e+07 22366 5.75828e+07 0 0.159002 0.993749 0.804238 1.15692e+08 0.00495014 2.56418e+07 1.94296e+07 2.57774e+07 272 2.58849e+07 2.63018e+07 0.00444114 2.57567e+07 49.8758 0.00542038 0.995696 0 50.1319 GTEX-T6MO-0006-SM-32QOU B1 8.8 Blood Whole Blood 0013756 -161 BP-23434 RNA isolation_PAXgene Blood RNA (Manual) 03/27/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.94221 443625 0.972828 0.945859 0.801815 19232 1 76 0.00254382 163 0 1.27819e+08 0.0259472 311348 1.35136e+08 1.91896e+07 19246 6.34299e+07 0 0.171013 0.945859 0.758404 1.27819e+08 0.00838055 2.88763e+07 1.2393e+08 2.92972e+07 203 2.93194e+07 2.95336e+07 0.00545092 2.93415e+07 50.0188 0.00230397 0.949508 0 50.3618 GTEX-T6MO-0008-SM-4DM6T B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 181 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986456 755450 0.943238 0.989266 0.820735 19657 1 76 0.00193601 136 0 5.4787e+07 0.0563311 201380 5.53815e+07 3.86918e+06 19664 2.72449e+07 0 0.122503 0.989266 0.811925 5.4787e+07 0.00329627 1.17538e+07 2.39976e+07 1.1883e+07 122 1.19474e+07 1.14746e+07 0.00261421 1.18437e+07 49.7822 0.00363623 0.992075 0 50.2733 GTEX-T6MO-0126-SM-4DM6X 1 B1 2 pieces ~12x11mm, adherent fat up to~40/50% of both aliquots which are irreuglarly shaped 9.2 Adrenal Gland Adrenal Gland 0002369 92 820 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987913 416564 0.975023 0.991072 0.829528 21648 1 76 0.0021685 126 0 6.08319e+07 0.0246683 895007 6.13799e+07 4.42255e+06 21665 3.02237e+07 0 0.145495 0.991072 0.822122 6.08319e+07 0.00364195 1.33657e+07 7.16366e+06 1.34197e+07 149 1.34283e+07 9.90485e+06 0.00290288 1.35332e+07 50.1947 0.0145814 0.994231 0 50.1008 GTEX-T6MO-0226-SM-32QOL 1 B1 2 pieces ~10x7mm, ~2.5mm adenomatoid nodule.colloid cyst encircled 7.3 Thyroid Thyroid 0002046 95 817 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.966004 173723 0.967122 0.969082 0.750187 24845 1 76 0.00229899 210 0 1.17058e+08 0.0325784 355820 1.20792e+08 1.74956e+07 24902 5.81961e+07 0 0.216934 0.969082 0.726993 1.17058e+08 0.00704195 2.56749e+07 1.00169e+07 2.58547e+07 242 2.58558e+07 1.92675e+07 0.00466293 2.60123e+07 50.1509 0.00294571 0.97216 0 50.1746 GTEX-T6MO-0326-SM-32QOK 1 B1 2 pieces ~11x9mm, abundant TDLU's, post menopausal appearance, representative areas encircled 7.8 Breast Breast - Mammary Tissue 0008367 103 809 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.979034 251813 0.971197 0.983743 0.790552 24760 1 76 0.00254819 176 0 9.33280e+07 0.0283731 550841 9.48704e+07 1.27585e+07 24792 4.62883e+07 0 0.180645 0.983743 0.7777 9.33280e+07 0.0085034 2.03579e+07 9.06018e+06 2.06594e+07 206 2.0696e+07 1.53873e+07 0.00551154 2.07365e+07 50.0489 0.00580625 0.988452 0 50.3675 GTEX-T6MO-0426-SM-32QOI 2 B1 2 pieces, ~8x8mm. Diffuse intra-alveolar hemorrhage but minimal inflammation 8.2 Lung Lung 0008952 106 806 BP-24837 RNA isolation_PAXgene Tissue miRNA 04/30/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.829583 235553 0.973526 0.833188 0.799527 23606 1 76 0.00245157 146 0 8.08447e+07 0.0260613 341354 9.70305e+07 1.41943e+07 23643 3.99563e+07 0 0.173999 0.833188 0.666156 8.08447e+07 0.00851382 1.77483e+07 7.25694e+06 1.80925e+07 174 1.80895e+07 1.45647e+07 0.00546958 1.80839e+07 49.9923 0.00351801 0.836794 0 50.4802 GTEX-T6MO-0526-SM-4DM6R 0 B1 6 pieces ~7x2mm, squamous mucosa well-preserved, up to 10% thickness 9 Esophagus Esophagus - Mucosa 0006920 115 797 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986909 407973 0.969929 0.99025 0.837272 20994 1 76 0.0022089 124 0 5.41782e+07 0.0297368 294324 5.47116e+07 3.94699e+06 21000 2.69209e+07 0 0.132657 0.99025 0.829108 5.41782e+07 0.00375826 1.19893e+07 1.00478e+07 1.2044e+07 126 1.20796e+07 1.08173e+07 0.00298096 1.21341e+07 50.1126 0.00537955 0.993592 0 50.1138 GTEX-T6MO-0626-SM-4DM6P 1 B1 6 pieces, ~5x5mm 8.7 Esophagus Esophagus - Muscularis 0004648 117 795 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988228 447182 0.97403 0.990085 0.852927 20649 1 76 0.00210264 135 0 6.03363e+07 0.0256721 680971 6.09405e+07 4.3195e+06 20660 3.00191e+07 0 0.121103 0.990085 0.844471 6.03363e+07 0.00354885 1.30802e+07 8.12122e+06 1.31028e+07 151 1.30784e+07 1.0453e+07 0.00282439 1.32208e+07 50.2708 0.0111744 0.991942 0 50.0433 GTEX-T6MO-0726-SM-4DM58 1 B1 6 pieces ~8x4mm, mucosa well preserved, 20-40% of thickness 6.9 Stomach Stomach 0000945 126 786 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.982076 277856 0.97712 0.984631 0.836197 21383 1 76 0.00211483 295 0 6.63987e+07 0.022549 837562 6.74351e+07 4.77683e+06 21398 3.29999e+07 0 0.140923 0.984631 0.823346 6.63987e+07 0.00362866 1.5262e+07 6.98174e+07 1.52654e+07 208 1.52888e+07 1.59837e+07 0.00286978 1.54102e+07 50.1977 0.0124203 0.987186 0 50.0056 GTEX-T6MO-0826-SM-4DM51 0 B1 6 pieces, ~7x4mm fragmented/detached msucosa but fairly well preserved, up to 10% thickness 8.1 Colon Colon - Transverse 0001157 136 776 BP-24849 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988113 327180 0.972374 0.990804 0.827842 21594 1 76 0.00204127 125 0 5.53091e+07 0.0273295 388307 5.58225e+07 4.00644e+06 21607 2.75011e+07 0 0.144532 0.990804 0.820229 5.53091e+07 0.00341808 1.20198e+07 6.24038e+06 1.20674e+07 134 1.20848e+07 9.55265e+06 0.00272781 1.21453e+07 50.125 0.0069561 0.993494 0 50.0988 GTEX-T6MO-1026-SM-4DM72 1 B1 6 pieces ~3.5mm d, mucosa reasonably well perserved 7.7 Fallopian Tube Fallopian Tube 0003889 145 767 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988891 388493 0.966588 0.990983 0.767588 23419 1 76 0.0021254 138 0 6.65536e+07 0.0331852 208400 6.71592e+07 4.66363e+06 23450 3.31142e+07 0 0.199 0.990983 0.760667 6.65536e+07 0.00342313 1.45237e+07 6.50493e+06 1.45828e+07 151 1.46001e+07 1.03839e+07 0.00277289 1.4644e+07 50.0752 0.00310308 0.993076 0 50.1014 GTEX-T6MO-1126-SM-4DM5D 1 B1 2 pieces ~12x5 , post menopausal appearance, minute (~0.1mm) transitional cell islets noted, ? incipient Brenner tumors 7.2 Ovary Ovary 0000992 147 765 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988216 288956 0.963375 0.990122 0.771404 22644 1 76 0.00212363 127 0 5.91436e+07 0.0364169 207212 5.97336e+07 4.2644e+06 22666 2.94334e+07 0 0.191971 0.990122 0.763784 5.91436e+07 0.00344412 1.29046e+07 6.63328e+06 1.29181e+07 137 1.29234e+07 9.60008e+06 0.0027826 1.3012e+07 50.1707 0.00346894 0.992028 0 50.0262 GTEX-T6MO-1226-SM-4DM5S 1 B1 6 pieces ~7x3mm, squmaous mucosa reasonably well preserved, ~5-10% of thickness 8.5 Vagina Vagina 0000996 152 760 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987688 369029 0.969815 0.990484 0.791365 21898 1 76 0.00221088 121 0 5.36901e+07 0.0299616 168060 5.42059e+07 3.86062e+06 21914 2.66861e+07 0 0.17845 0.990484 0.783835 5.36901e+07 0.0036573 1.18915e+07 8.23974e+06 1.19205e+07 123 1.19726e+07 9.744e+06 0.00293205 1.19908e+07 50.038 0.0031004 0.99328 0 50.0609 GTEX-T6MO-1426-SM-4DM73 1 B1 4 pieces ~10x6mm a few foci of endocervical glands well preserved, encircled, up to ~1.5mm d. 7.2 Cervix Uteri Cervix - Endocervix 0000458 159 753 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986713 373623 0.965643 0.98933 0.767293 24051 1 76 0.00216757 143 0 6.41538e+07 0.0340912 169174 6.48457e+07 4.64486e+06 24080 3.1893e+07 0 0.19835 0.98933 0.759106 6.41538e+07 0.00363469 1.40826e+07 6.79499e+06 1.4121e+07 146 1.41595e+07 1.05774e+07 0.00289919 1.42123e+07 50.093 0.00260887 0.991948 0 50.0681 GTEX-T6MO-1526-SM-4DM57 1 B1 2 pieces ~10x7mm, Scanty proliferative pattern endometrium, reasonably well preserved, up to 2 mm thick on edge of alqiuot 8.1 Uterus Uterus 0000995 162 750 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989935 297010 0.97081 0.992001 0.817388 22399 1 76 0.00203383 148 0 6.75495e+07 0.0288329 190030 6.80941e+07 4.88005e+06 22418 3.36028e+07 0 0.153423 0.992001 0.81085 6.75495e+07 0.00338463 1.46726e+07 5.95078e+06 1.47327e+07 156 1.47268e+07 1.2489e+07 0.00270782 1.4818e+07 50.1543 0.0027907 0.994068 0 50.1022 GTEX-T6MO-1626-SM-32QOM 0 B1 6 pieces, ~7x2.5mm, squamous epithelium is ~3-5% of thickness 7 Skin Skin - Sun Exposed (Lower leg) 0004264 182 730 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.945644 373846 0.972007 0.95173 0.777362 23289 1 76 0.00249327 185 0 7.28858e+07 0.027773 722523 7.65825e+07 1.19358e+07 23323 3.60769e+07 0 0.194646 0.95173 0.739838 7.28858e+07 0.00898062 1.58263e+07 8.01657e+06 1.60547e+07 174 1.60866e+07 1.09911e+07 0.00571621 1.62287e+07 50.22 0.00943457 0.957816 0 50.3583 GTEX-T6MO-1726-SM-33HB8 0 B1 2 pieces, ~15x9mm 7 Adipose Tissue Adipose - Subcutaneous 0002190 189 723 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.921301 351276 0.975393 0.9245 0.812654 23813 1 76 0.00237257 376 0 1.27521e+08 0.0243261 850479 1.37935e+08 1.31914e+07 23854 6.32426e+07 0 0.16274 0.9245 0.751298 1.27521e+08 0.00718114 2.80409e+07 1.22992e+07 2.82506e+07 424 2.83681e+07 1.8928e+07 0.00476854 2.83458e+07 49.9804 0.00616578 0.927699 0 50.1862 GTEX-T6MO-1926-SM-32QOJ 0 B1 2 pieces ~4.5mm d generally clean specimen, trace adherent fat/fibrous tissue 6.6 Blood Vessel Artery - Tibial 0007610 195 717 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.932173 190341 0.972731 0.936572 0.810864 22243 1 76 0.00239275 197 0 1.00365e+08 0.0269084 387160 1.07162e+08 1.47405e+07 22274 4.97701e+07 0 0.161867 0.936572 0.759432 1.00365e+08 0.00793135 2.1515e+07 6.91892e+06 2.17443e+07 224 2.17857e+07 1.72341e+07 0.00514904 2.19109e+07 50.1432 0.00361285 0.940971 0 50.265 GTEX-T6MO-2026-SM-33HB4 0 B1 2 pieces ~6mm d. some interstital fat and focal adherent fat, up to 1mm thick 7 Nerve Nerve - Tibial 0001323 197 715 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.850133 231663 0.967178 0.852439 0.749076 25027 1 76 0.00234981 215 0 1.07936e+08 0.0325605 358923 1.2662e+08 1.87434e+07 25083 5.35575e+07 0 0.218102 0.852439 0.638542 1.07936e+08 0.00649199 2.36766e+07 9.39453e+06 2.38705e+07 255 2.38982e+07 1.55819e+07 0.0044153 2.39324e+07 50.0357 0.00283464 0.854746 0 50.2039 GTEX-T8EM-0001-SM-3G3SK C1 Blood Whole Blood 0013756 336 BP-23690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/02/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003060_R01C01 GTEX-T8EM-0001-SM-3G3TL C1 Blood Whole Blood 0013756 336 BP-23690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/02/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R01C01 GTEX-T8EM-0001-SM-4SVPM C1 Blood Whole Blood 0013756 336 BP-23690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/02/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-T8EM-0001-SM-5SOEA C1 Blood Whole Blood 0013756 336 BP-23690 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/02/2012 LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-T8EM-0006-SM-3DB71 C1 7.7 Blood Whole Blood 0013756 336 BP-23693 RNA isolation_PAXgene Blood RNA (Manual) 04/02/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.903087 484503 0.977135 0.90736 0.80563 20550 1 76 0.00283724 142 0 9.85227e+07 0.0214972 284492 1.08582e+08 1.24411e+07 20563 4.87655e+07 0 0.171505 0.90736 0.730997 9.85227e+07 0.0101346 2.23418e+07 8.01295e+07 2.2699e+07 163 2.27729e+07 2.21167e+07 0.00646874 2.27505e+07 49.9754 0.00262007 0.911634 0 50.3965 GTEX-T8EM-0126-SM-4DM5R 2 C1 2 pieces, ~7x7mm, spermatogenesis present but not well preserved 7.2 Testis Testis 0000473 355 1060 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986425 599916 0.914138 0.989114 0.707039 31399 1 76 0.00226248 122 0 5.77636e+07 0.0855741 328706 5.83994e+07 4.31277e+06 31440 2.87156e+07 0 0.207098 0.989114 0.699342 5.77636e+07 0.00366222 1.18443e+07 1.64161e+07 1.19024e+07 113 1.19726e+07 9.23482e+06 0.00296045 1.19208e+07 49.8914 0.00562859 0.991802 0 50.1224 GTEX-T8EM-0226-SM-3DB7C 1 C1 2 pieces 7x6mm 6.9 Thyroid Thyroid 0002046 359 1057 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.97507 740475 0.966748 0.979876 0.728114 26861 1 76 0.0026586 521 0 1.8081e+08 0.0329784 628470 1.84523e+08 1.83356e+07 26946 8.9637e+07 0 0.238635 0.979876 0.713461 1.8081e+08 0.00927771 3.94793e+07 1.93723e+07 3.99181e+07 530 4.00962e+07 2.49202e+07 0.00595193 4.01145e+07 50.0114 0.00340592 0.984681 0 50.2764 GTEX-T8EM-0326-SM-3DB7F 1 C1 2 pieces, 8x7mm 8.4 Lung Lung 0008952 361 1055 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.932121 527011 0.97493 0.936125 0.790638 27283 1 76 0.00240673 522 0 1.88368e+08 0.0247133 994095 2.01221e+08 2.13135e+07 27350 9.3483e+07 0 0.184291 0.936125 0.740136 1.88368e+08 0.0091001 4.15961e+07 1.71428e+07 4.2212e+07 542 4.22865e+07 3.20258e+07 0.0057391 4.22959e+07 50.0055 0.00494031 0.940129 0 50.3674 GTEX-T8EM-0426-SM-4DM7E 1 C1 6 pieces, ~8x1.5mm.minimal atherosclerosis 8.1 Blood Vessel Artery - Aorta 0001496 364 1053 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.989827 399314 0.968181 0.991865 0.804576 21646 1 76 0.00212729 132 0 6.14764e+07 0.0314769 151077 6.19806e+07 4.49417e+06 21665 3.05822e+07 0 0.163605 0.991865 0.798031 6.14764e+07 0.00344806 1.32114e+07 7.49662e+06 1.32399e+07 142 1.32625e+07 1.0746e+07 0.00278632 1.33148e+07 50.0984 0.00243749 0.993903 0 50.0539 GTEX-T8EM-0526-SM-4DM64 1 C1 6 pieces ~7x3 mm 9.3 Esophagus Esophagus - Mucosa 0006920 367 1051 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.988945 487359 0.970148 0.991023 0.827729 20764 1 76 0.0022441 120 0 5.70892e+07 0.0295902 253408 5.76063e+07 4.16945e+06 20776 2.84049e+07 0 0.142419 0.991023 0.820298 5.70892e+07 0.00367385 1.27773e+07 1.19582e+07 1.28177e+07 128 1.28501e+07 1.17043e+07 0.00295748 1.28688e+07 50.0363 0.00439896 0.993101 0 50.0788 GTEX-T8EM-0626-SM-4DM62 1 C1 6 pieces 7x4mm 7.9 Esophagus Esophagus - Muscularis 0004648 369 1050 BP-24887 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.987067 429827 0.970468 0.990057 0.805767 22514 1 76 0.00215534 146 0 7.12314e+07 0.029257 362116 7.19468e+07 5.26485e+06 22534 3.5407e+07 0 0.1647 0.990057 0.797755 7.12314e+07 0.00351915 1.53712e+07 8.05777e+06 1.54039e+07 163 1.54486e+07 1.23442e+07 0.00283519 1.55305e+07 50.1321 0.00503311 0.993047 0 50.0531 GTEX-T8EM-0826-SM-4DM76 1 C1 2 pieces, ~8x7mm remarkably well-preserved, Islets well-visualized, encircled 7.1 Pancreas Pancreas 0001150 373 1047 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.98765 627901 0.955439 0.990391 0.814329 20043 1 76 0.00218693 112 0 5.65203e+07 0.0444241 97794 5.70687e+07 4.32408e+06 20052 2.80943e+07 0 0.14111 0.990391 0.806504 5.65203e+07 0.00364803 1.26815e+07 2.24422e+07 1.28267e+07 114 1.28582e+07 1.50777e+07 0.00291546 1.28228e+07 49.931 0.00171362 0.993132 0 50.2845 GTEX-T8EM-1026-SM-3DB7M 0 C1 6 pieces, ~8x3mm squamous mucosa 2-3% of thickness 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 378 1043 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.975093 402190 0.973755 0.979471 0.798068 26157 1 76 0.00255469 529 0 1.57168e+08 0.0259447 1.1504e+06 1.60462e+08 1.72279e+07 26204 7.79847e+07 0 0.175687 0.979471 0.781685 1.57168e+08 0.00910232 3.43251e+07 1.74476e+07 3.47224e+07 498 3.48016e+07 2.5094e+07 0.00581387 3.49192e+07 50.0843 0.00716928 0.98385 0 50.2877 GTEX-T8EM-1126-SM-3DB7D 0 C1 2 pieces ~9x8mm 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 382 1041 BP-24889 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.930029 376083 0.975482 0.933781 0.813012 24587 1 76 0.00251623 376 0 1.36622e+08 0.0242293 652841 1.4631e+08 1.56224e+07 24630 6.77814e+07 0 0.16247 0.933781 0.759175 1.36622e+08 0.00901855 2.9693e+07 1.29069e+07 3.01323e+07 375 3.01525e+07 2.1729e+07 0.00575433 3.01948e+07 50.035 0.00446203 0.937533 0 50.3672 GTEX-T8EM-1226-SM-4DM5J 2 C1 6 pieces, ~8x2.5mm, mucosa partially autolyzed 7.7 Stomach Stomach 0000945 385 1038 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.986854 511779 0.964444 0.989712 0.815559 23758 1 76 0.00234941 195 0 7.06004e+07 0.0349088 466201 7.13343e+07 5.1254e+06 23777 3.50805e+07 0 0.148885 0.989712 0.807168 7.06004e+07 0.00375252 1.56551e+07 3.5995e+07 1.57518e+07 167 1.58221e+07 1.45934e+07 0.00304894 1.57898e+07 49.9489 0.00653544 0.992569 0 50.1538 GTEX-T8EM-1326-SM-3DB7G 0 C1 2 pieces, ~8x8mm minimal interstitial fat 6.3 Muscle Muscle - Skeletal 0011907 389 1036 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.978935 297485 0.98061 0.982044 0.864018 22399 1 76 0.00230325 521 0 1.52489e+08 0.0191539 1.74561e+06 1.55277e+08 1.48655e+07 22424 7.5807e+07 0 0.116591 0.982044 0.848504 1.52489e+08 0.00844867 3.30763e+07 1.52476e+07 3.32144e+07 529 3.31126e+07 2.74311e+07 0.00536623 3.36016e+07 50.3665 0.0112419 0.985154 0 50.1041 GTEX-T8EM-1526-SM-3DB7I 0 C1 2 pieces, ~4mm d. good clean specimens 7.1 Nerve Nerve - Tibial 0001323 393 1035 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.980857 858030 0.966935 0.9855 0.740047 26837 1 76 0.00261205 387 0 1.63549e+08 0.0327604 518464 1.65956e+08 1.64347e+07 26914 8.10621e+07 0 0.226888 0.9855 0.729316 1.63549e+08 0.00926746 3.5707e+07 1.51229e+07 3.61744e+07 423 3.62931e+07 2.38691e+07 0.00592408 3.63196e+07 50.0182 0.00312411 0.990143 0 50.3251 GTEX-T8EM-1626-SM-3DB7K 0 C1 2 pieces, good clean specimens 7.6 Blood Vessel Artery - Tibial 0007610 394 1035 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.928582 408437 0.971101 0.933206 0.803307 24365 1 76 0.00251068 382 0 1.5976e+08 0.0285025 664564 1.71194e+08 1.8391e+07 24408 7.91916e+07 0 0.167794 0.933206 0.749651 1.5976e+08 0.00962584 3.39876e+07 1.34599e+07 3.4582e+07 427 3.47592e+07 2.71941e+07 0.00605063 3.45313e+07 49.8356 0.00388193 0.937831 0 50.4334 GTEX-T8EM-1826-SM-4DM7F 1 C1 2 pieces, mucosa reasonably well preserved 5.7 Prostate Prostate 0002367 399 1032 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 07/23/2013 TruSeq.v1 RNASEQ 0.985608 379891 0.961051 0.987822 0.756748 25039 1 76 0.0022841 161 0 7.57488e+07 0.0387558 908340 7.66827e+07 4.51559e+06 25076 3.76634e+07 0 0.204303 0.987822 0.747532 7.57488e+07 0.00346232 1.64763e+07 9.54529e+06 1.66322e+07 189 1.66182e+07 9.06827e+06 0.00287189 1.66572e+07 50.0586 0.0118454 0.990035 0 50.2353 GTEX-TKQ1-0002-SM-3G3SW B1 Blood Whole Blood 0013756 -154 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003060_R04C01 GTEX-TKQ1-0002-SM-3G3TX B1 Blood Whole Blood 0013756 -154 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R04C01 GTEX-TKQ1-0002-SM-3UZF2 B1 Blood Whole Blood 0013756 -154 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-TKQ1-0002-SM-6WBRZ B1 Blood Whole Blood 0013756 -154 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TKQ1-0003-SM-3NMAE B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -154 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990166 1.55022e+06 0.959657 0.992622 0.807317 23354 1 76 0.00425818 284 0 1.18623e+08 0.0395802 584425 1.19504e+08 2.35325e+07 23394 5.89749e+07 0 0.15234 0.992622 0.801361 1.18623e+08 0.00545427 2.60713e+07 2.52013e+07 2.62142e+07 263 2.63839e+07 2.66917e+07 0.00485474 2.61886e+07 49.8142 0.0048904 0.995079 0 50.1367 GTEX-TKQ1-0006-SM-33HBI B1 8.7 Blood Whole Blood 0013756 -154 BP-23818 RNA isolation_PAXgene Blood RNA (Manual) 04/05/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.637922 503557 0.959255 0.640553 0.792851 21388 1 76 0.00247737 181 0 1.00512e+08 0.040295 289505 1.56915e+08 1.62872e+07 21406 4.98086e+07 0 0.166404 0.640553 0.507863 1.00512e+08 0.00747746 2.17109e+07 3.08988e+07 2.20948e+07 204 2.22385e+07 1.88639e+07 0.00496714 2.19696e+07 49.6959 0.00184498 0.643184 0 50.4382 GTEX-TKQ1-0008-SM-4DXSO B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 185 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990487 525361 0.975122 0.99314 0.839154 21356 1 76 0.00215551 189 0 7.83048e+07 0.0244642 151659 7.88457e+07 7.11118e+06 21376 3.89549e+07 0 0.135968 0.99314 0.833397 7.83048e+07 0.00280649 1.75172e+07 9.07497e+06 1.75051e+07 190 1.75981e+07 1.7069e+07 0.00248013 1.76215e+07 50.0332 0.00192349 0.995793 0 49.9826 GTEX-TKQ1-0126-SM-33HB3 1 B1 2 pieces, ~12x6mm. Focal lymphocytic thyroiditis (encircled), not diffuse enough to be Hashimoto's 7.5 Thyroid Thyroid 0002046 116 805 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.953126 794116 0.957632 0.956149 0.735697 25747 1 76 0.00237356 375 0 1.4145e+08 0.0421202 686478 1.47937e+08 1.51758e+07 25811 7.02731e+07 0 0.221935 0.956149 0.703436 1.4145e+08 0.00612853 3.05169e+07 2.80605e+07 3.09231e+07 422 3.09213e+07 2.03045e+07 0.00424511 3.09433e+07 50.0178 0.00464033 0.959173 0 50.3306 GTEX-TKQ1-0226-SM-33HB5 0 B1 2 pieces ~12x6mm. No visible ductal elements, fibro-adipose tissues only. 7.7 Breast Breast - Mammary Tissue 0008367 124 797 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.97954 354881 0.977719 0.982832 0.844776 23406 1 76 0.00240924 372 0 1.26181e+08 0.0220039 804124 1.28385e+08 1.09869e+07 23439 6.26379e+07 0 0.132942 0.982832 0.830274 1.26181e+08 0.00684283 2.78025e+07 1.10473e+07 2.82902e+07 367 2.82542e+07 2.06894e+07 0.00461861 2.82396e+07 49.9871 0.00626336 0.986124 0 50.4348 GTEX-TKQ1-0326-SM-4DXSM 1 B1 6 pieces ~8x2.5mm. Squamous mucosa is ~10-20% of thickness; occasional sub-mucosal glands noted, encircled. Focal chronic inflammation ensquared. 9.3 Esophagus Esophagus - Mucosa 0006920 129 792 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987502 384094 0.976374 0.990618 0.834589 21347 1 76 0.00232287 128 0 5.72812e+07 0.0231272 302408 5.78237e+07 5.264e+06 21358 2.84624e+07 0 0.141785 0.990618 0.826759 5.72812e+07 0.00317507 1.28764e+07 7.24547e+06 1.28677e+07 130 1.29114e+07 1.15382e+07 0.00274763 1.30088e+07 50.188 0.00522983 0.993734 0 49.9831 GTEX-TKQ1-0426-SM-4DXT4 1 B1 6 pieces ~8x3mm 8.6 Esophagus Esophagus - Muscularis 0004648 130 791 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987671 348721 0.974693 0.990916 0.826969 22533 1 76 0.00233427 212 0 8.44155e+07 0.0250003 539477 8.51893e+07 7.9274e+06 22553 4.19768e+07 0 0.147724 0.990916 0.819457 8.44155e+07 0.00319525 1.82964e+07 7.70647e+06 1.83712e+07 231 1.8429e+07 1.47989e+07 0.00276335 1.84952e+07 50.0897 0.00633268 0.994161 0 50.102 GTEX-TKQ1-0526-SM-4DXTG 1 B1 6 pieces, ~10x4mm. Mucosa well- preserved, ~20-25% of thickness. Surface hemorrhage/erosions ? etiology. 8.8 Stomach Stomach 0000945 138 783 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.98701 436248 0.975896 0.990832 0.836798 21436 1 76 0.00224167 139 0 6.585e+07 0.0238038 302715 6.64593e+07 6.30839e+06 21453 3.27171e+07 0 0.139098 0.990832 0.829126 6.585e+07 0.00318149 1.43279e+07 6.57612e+06 1.4362e+07 152 1.4426e+07 1.21397e+07 0.00270977 1.45062e+07 50.1386 0.00455489 0.994653 0 50.0594 GTEX-TKQ1-0626-SM-4DXTS 1 B1 6 pieces ~9x3mm. Mucosa remarkably well-preserved, ~10% of thickness 8.2 Colon Colon - Transverse 0001157 146 775 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989217 382203 0.973278 0.991722 0.824603 21714 1 76 0.00224794 133 0 5.98383e+07 0.0264037 306151 6.03378e+07 5.18394e+06 21727 2.97647e+07 0 0.148675 0.991722 0.817777 5.98383e+07 0.00315083 1.30021e+07 5.64722e+06 1.29798e+07 141 1.30083e+07 1.06314e+07 0.00269824 1.31196e+07 50.213 0.00507395 0.994227 0 49.9571 GTEX-TKQ1-0926-SM-4DXU2 1 B1 2 pieces ~8x8mm. Better preserved than usual, spermatogenesis present but appears slightly reduced 6.3 Testis Testis 0000473 168 753 BP-25069 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988326 523556 0.934139 0.991093 0.752946 31605 1 76 0.00234442 142 0 6.91487e+07 0.0655682 636477 6.97702e+07 6.09273e+06 31657 3.43908e+07 0 0.181193 0.991093 0.746239 6.91487e+07 0.00313042 1.45072e+07 1.06718e+07 1.44873e+07 142 1.45665e+07 1.16595e+07 0.00273633 1.46072e+07 50.0697 0.00912248 0.993859 0 49.9657 GTEX-TKQ1-1026-SM-4GICL 0 B1 6 pieces, ~6x2.5mm. Squamous epithelium is ~2-3% of thickness. 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 186 735 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.985406 310857 0.968863 0.988253 0.785721 23983 1 76 0.00254984 224 0 9.04389e+07 0.0309064 662051 9.15139e+07 9.13061e+06 24018 4.49676e+07 0 0.183143 0.988253 0.776491 9.04389e+07 0.00410503 1.98082e+07 1.12548e+07 1.98925e+07 215 1.99426e+07 1.46552e+07 0.00332519 2.00117e+07 50.0865 0.00723443 0.9911 0 50.1062 GTEX-TKQ1-1126-SM-4GIAZ 0 B1 2 pieces ~10x5mm 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 188 733 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.989045 486267 0.977664 0.991792 0.83885 22384 1 76 0.00243373 214 0 8.82148e+07 0.0220456 327245 8.89449e+07 9.0466e+06 22406 4.38674e+07 0 0.138815 0.991792 0.831964 8.82148e+07 0.00369842 1.94514e+07 8.36539e+06 1.95214e+07 227 1.95787e+07 1.57922e+07 0.00306432 1.96314e+07 50.0672 0.00367919 0.994538 0 50.0898 GTEX-TKQ1-1226-SM-4GICJ 0 B1 2 pieces ~5mm d. Excellent clean specimens; one aliquot with small branch arteries, encircled, suitable for analysis. 5.8 Blood Vessel Artery - Tibial 0007610 195 726 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.984791 367990 0.971394 0.987834 0.842328 22282 1 76 0.00241438 215 0 9.44162e+07 0.0282444 340541 9.5579e+07 9.19216e+06 22301 4.69238e+07 0 0.129065 0.987834 0.832081 9.44162e+07 0.00409418 2.03428e+07 1.14655e+07 2.04143e+07 254 2.04413e+07 1.77795e+07 0.00325169 2.06018e+07 50.1955 0.00356293 0.990878 0 50.0878 GTEX-TKQ1-1326-SM-4DXU7 0 B1 2 pieces, ~4.5-5mm d. Excellent clean specimens, minimal fat. 6 Nerve Nerve - Tibial 0001323 198 723 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986939 403501 0.965186 0.989271 0.790116 22178 1 76 0.00240731 127 0 5.66847e+07 0.0345598 348655 5.72994e+07 4.98676e+06 22200 2.81914e+07 0 0.175071 0.989271 0.781639 5.66847e+07 0.00320873 1.24329e+07 7.91753e+06 1.24758e+07 136 1.24803e+07 8.83423e+06 0.00280707 1.25645e+07 50.168 0.00608479 0.991604 0 50.0861 GTEX-TKQ1-1426-SM-4GICK 0 B1 2 pieces ~10x7mm, <5% interstital fat 8.5 Muscle Muscle - Skeletal 0011907 200 721 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.990136 392944 0.98202 0.992829 0.885739 19270 1 76 0.00234081 279 0 9.72993e+07 0.0177294 1.16553e+06 9.80022e+07 1.00322e+07 19280 4.84377e+07 0 0.0962808 0.992829 0.879387 9.72993e+07 0.00362512 2.12572e+07 1.5041e+07 2.1305e+07 297 2.13935e+07 1.96078e+07 0.00298122 2.14161e+07 50.0264 0.0118929 0.995521 0 50.0562 GTEX-TKQ2-0002-SM-325AD B1 Blood Whole Blood 0013756 -53 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 6992696016_R01C01 GTEX-TKQ2-0002-SM-325HS B1 Blood Whole Blood 0013756 -53 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871093_R01C01 GTEX-TKQ2-0002-SM-3USRK B1 Blood Whole Blood 0013756 -53 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 LCSET-2654,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-TKQ2-0002-SM-5URCO B1 Blood Whole Blood 0013756 -53 BP-23822 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/05/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TKQ2-0004-SM-3NMAC B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -52 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991065 1.03331e+06 0.966443 0.993391 0.838161 22632 1 76 0.00375379 230 0 1.08668e+08 0.0330813 892147 1.09391e+08 2.10121e+07 22666 5.40537e+07 0 0.128281 0.993391 0.832622 1.08668e+08 0.00484423 2.39429e+07 2.0034e+07 2.41349e+07 234 2.42015e+07 2.71773e+07 0.00429773 2.41301e+07 49.9262 0.00815558 0.995717 0 50.1997 GTEX-TKQ2-0006-SM-33HBH B1 8.1 Blood Whole Blood 0013756 -53 BP-23818 RNA isolation_PAXgene Blood RNA (Manual) 04/05/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.979722 1.24996e+06 0.956319 0.982907 0.782908 21178 1 76 0.00265914 205 0 1.44026e+08 0.0417112 537046 1.46531e+08 1.28777e+07 21200 7.13682e+07 0 0.173411 0.982907 0.769526 1.44026e+08 0.00722916 3.1602e+07 1.22375e+08 3.24448e+07 233 3.24805e+07 3.06702e+07 0.00493674 3.20482e+07 49.665 0.00366508 0.986093 0 50.658 GTEX-TKQ2-0008-SM-4DM5L B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 197 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.991126 582112 0.965458 0.993027 0.828554 21274 1 76 0.00191181 187 0 7.85638e+07 0.0341684 243524 7.91154e+07 5.58381e+06 21292 3.91102e+07 0 0.136904 0.993027 0.822777 7.85638e+07 0.00313571 1.73707e+07 1.55153e+07 1.74125e+07 182 1.74808e+07 1.65775e+07 0.00252259 1.74474e+07 49.9521 0.00307808 0.994929 0 50.0601 GTEX-TKQ2-0226-SM-4DM6V 1 B1 2 pieces, ~7x7mm. NOTE: unusually well-preserved with prominent medulla, also unusually well-preserved 9.6 Adrenal Gland Adrenal Gland 0002369 193 743 BP-24892 RNA isolation_PAXgene Tissue miRNA 05/01/2012 LCSET-3205 05/31/2013 TruSeq.v1 RNASEQ 0.990114 401991 0.971559 0.99253 0.846323 21081 1 76 0.00202102 131 0 6.36973e+07 0.0280986 1.36326e+06 6.41767e+07 4.55599e+06 21092 3.16943e+07 0 0.125236 0.99253 0.84 6.36973e+07 0.00331814 1.40336e+07 1.17415e+07 1.40985e+07 154 1.41012e+07 1.14528e+07 0.002668 1.41704e+07 50.1224 0.0212423 0.994945 0 50.1154 GTEX-TKQ2-0426-SM-4DXUO 1 B1 2 pieces ~8x7mm. Islets well visualized, representative ones encircled. Minimal fat/saponification; well preserved specimen 6.6 Pancreas Pancreas 0001150 199 739 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987143 415296 0.976404 0.99039 0.844129 20059 1 76 0.00245264 100 0 5.52808e+07 0.0233052 251354 5.58172e+07 4.97717e+06 20072 2.74543e+07 0 0.132275 0.99039 0.836017 5.52808e+07 0.00341839 1.26752e+07 1.57556e+07 1.27542e+07 110 1.27793e+07 1.58721e+07 0.00293394 1.28305e+07 50.0999 0.00450317 0.993637 0 50.1554 GTEX-TKQ2-0626-SM-EZ6LB 1 B1 2 pieces, ~8x5mm. NOTE: Each aliquot is ~40% cortex 5.7 Kidney Kidney - Medulla 0001293 207 731 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.991421 150604 0.970927 0.99311 0.819589 24012 1 76 0.00233551 196 0 7.05508e+07 0.0288563 2.46014e+06 7.10403e+07 5.40061e+06 24038 3.51519e+07 0 0.151338 0.99311 0.813942 7.05508e+07 0.00343508 1.54754e+07 9.11198e+06 1.56484e+07 242 1.5572e+07 8.21566e+06 0.00288436 1.56387e+07 50.1069 0.0346302 0.994799 0 50.278 GTEX-TKQ2-0826-SM-33HB6 0 B1 2 pieces, ~8x6mm, minimal interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 213 726 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.930456 313578 0.98306 0.933688 0.867277 21259 1 76 0.00203629 517 0 1.38519e+08 0.016758 3.02279e+06 1.48357e+08 1.39543e+07 21274 6.87682e+07 0 0.115783 0.933688 0.809766 1.38519e+08 0.00665092 3.02202e+07 1.95569e+07 3.04827e+07 527 3.02978e+07 2.14564e+07 0.00433562 3.0791e+07 50.4037 0.0203751 0.936921 0 50.2162 GTEX-TKQ2-0926-SM-4DXU5 1 B1 6 pieces ~8x3mm. Mucosa well-presereved but only focally present in 4 aliquots, where prsent ~20% of thickness 8.4 Stomach Stomach 0000945 214 726 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989608 323407 0.974095 0.992114 0.822818 22268 1 76 0.00217056 145 0 6.19541e+07 0.0255541 431876 6.24465e+07 5.629e+06 22283 3.08237e+07 0 0.151277 0.992114 0.816329 6.19541e+07 0.0030179 1.35231e+07 5.57059e+06 1.35263e+07 143 1.35541e+07 1.13518e+07 0.00259316 1.36424e+07 50.1623 0.00691593 0.994621 0 50.0059 GTEX-TKQ2-1026-SM-33HB7 0 B1 2 pieces, ~2.5mm d. Good clean specimen 8.1 Blood Vessel Artery - Tibial 0007610 216 724 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.954446 313345 0.971854 0.95738 0.829416 23411 1 76 0.00217089 379 0 1.30791e+08 0.0277363 847797 1.36613e+08 1.10659e+07 23443 6.49519e+07 0 0.142438 0.95738 0.794066 1.30791e+08 0.00664728 2.78232e+07 1.11527e+07 2.83094e+07 382 2.82706e+07 2.37179e+07 0.00440223 2.82444e+07 49.9768 0.00620582 0.960313 0 50.4331 GTEX-TKQ2-1226-SM-4DXSV 1 B1 6 pieces 7x4mm. No mucosa, just muscle. May be used once relabeled 8.2 Esophagus Esophagus - Muscularis 0004648 226 715 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986243 403534 0.974081 0.989911 0.83559 22109 1 76 0.00216106 169 0 7.48356e+07 0.0255871 678763 7.55983e+07 7.15935e+06 22125 3.71831e+07 0 0.138491 0.989911 0.82716 7.48356e+07 0.00303746 1.60215e+07 6.46316e+06 1.6056e+07 182 1.61013e+07 1.35338e+07 0.00259764 1.6232e+07 50.2021 0.00897855 0.993579 0 50.0537 GTEX-TKQ2-1326-SM-4DXT9 1 B1 6 pieces ~7x4mm. Mucosa unusually well-preserved; ~10% of thickness 7.6 Colon Colon - Transverse 0001157 227 714 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986467 346868 0.970935 0.989946 0.800752 23333 1 76 0.00244633 137 0 6.16682e+07 0.0282183 1.24284e+06 6.22946e+07 5.70474e+06 23355 3.06196e+07 0 0.170183 0.989946 0.792701 6.16682e+07 0.00341383 1.37182e+07 6.97613e+06 1.36472e+07 152 1.36957e+07 8.75463e+06 0.00292838 1.38683e+07 50.3131 0.019951 0.993424 0 49.8703 GTEX-TKQ2-1526-SM-4DXUN 2 B1 2 pieces, ~8x5mm. Spermatogenesis is present but poorly preserved 7.4 Testis Testis 0000473 230 712 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987771 495907 0.925526 0.990624 0.727697 31148 1 76 0.00225487 123 0 5.85319e+07 0.0741502 477678 5.90859e+07 5.2977e+06 31188 2.91031e+07 0 0.197829 0.990624 0.720874 5.85319e+07 0.0029769 1.21208e+07 1.01473e+07 1.21349e+07 116 1.22273e+07 1.00738e+07 0.00261484 1.21834e+07 49.9099 0.00808447 0.993477 0 50.0289 GTEX-TKQ2-1726-SM-4DXUP 1 B1 2 pieces ~8x7mm. Minimal steatosis 8.4 Liver Liver 0001114 235 708 BP-24929 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989763 515316 0.981899 0.992533 0.882397 19920 1 76 0.00202439 147 0 7.44939e+07 0.0175251 1.00245e+06 7.50544e+07 6.9217e+06 19928 3.70344e+07 0 0.0995023 0.992533 0.875808 7.44939e+07 0.00272962 1.62906e+07 1.10712e+07 1.62223e+07 169 1.62725e+07 1.71988e+07 0.00237602 1.64329e+07 50.2451 0.0133563 0.995302 0 49.895 GTEX-TKQ2-1826-SM-33HB2 1 B1 2 pieces, 7x7mm. Ductal elements (rare) present, representive ones encircled. 7.3 Breast Breast - Mammary Tissue 0008367 236 707 BP-24927 RNA isolation_PAXgene Tissue miRNA 05/02/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.932452 230113 0.974727 0.93466 0.809604 25075 1 76 0.0021484 523 0 1.32648e+08 0.0249903 1.43217e+06 1.41921e+08 1.26979e+07 25116 6.59372e+07 0 0.165123 0.93466 0.756704 1.32648e+08 0.00607083 2.90009e+07 1.21707e+07 2.96899e+07 447 2.96664e+07 2.01175e+07 0.00410498 2.93106e+07 49.6984 0.0100913 0.936867 0 50.587 GTEX-TMKS-0002-SM-3G3S6 B1 Blood Whole Blood 0013756 -236 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array EXCLUDE 8222003099_R02C01 GTEX-TMKS-0002-SM-3G3T7 B1 Blood Whole Blood 0013756 -236 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R06C01 GTEX-TMKS-0002-SM-DINCQ B1 Blood Whole Blood 0013756 -236 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-TMKS-0002-SM-DLIOM B1 Blood Whole Blood 0013756 -236 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-TMKS-0005-SM-33OV7 B1 8 Blood Whole Blood 0013756 -236 BP-23850 RNA isolation_PAXgene Blood RNA (Manual) 04/06/2012 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.250172 145642 0.958088 0.252056 0.77341 18053 1 76 0.00300145 152 0 2.56139e+07 0.0389023 69201 1.0162e+08 1.23908e+07 18056 1.24123e+07 0 0.184678 0.252056 0.194943 2.56139e+07 0.0112571 5.63517e+06 1.89204e+07 5.79529e+06 150 5.83584e+06 5.17819e+06 0.00709839 5.78845e+06 49.7962 0.000680981 0.253941 0 50.7004 GTEX-TMKS-0005-SM-5SI7W B1 8 Blood Whole Blood 0013756 -236 BP-23850 RNA isolation_PAXgene Blood RNA (Manual) 04/06/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.982991 567317 0.960291 0.987895 0.783322 18888 1 76 0.00218218 110 0 6.48321e+07 0.0391778 84441 6.56265e+07 7.24031e+06 18895 3.2139e+07 0 0.176968 0.987895 0.77384 6.48321e+07 0.00424058 1.45161e+07 6.47124e+07 1.45941e+07 121 1.46589e+07 1.42728e+07 0.00320627 1.47833e+07 50.2113 0.00128669 0.992798 0 50.134 GTEX-TMKS-0126-SM-3DB7S 0 B1 6 pieces ~7.5x3mm. Squamous epithelium is ~2-3% of thickness. 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 37 1051 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 EXCLUDE 0.969863 529221 0.970185 0.975255 0.820482 26496 1 76 0.0028591 531 0 1.60885e+08 0.0295475 1.2268e+06 1.64967e+08 1.8142e+07 26540 7.97052e+07 0 0.149703 0.975255 0.800179 1.60885e+08 0.00993316 3.46263e+07 1.89219e+07 3.5163e+07 492 3.51798e+07 2.53452e+07 0.00637658 3.5452e+07 50.1928 0.00743664 0.980647 0 50.3845 GTEX-TMKS-0226-SM-3DB7X 0 B1 2pieces, ~7x6mm. Mixed fibrous-adipose tissues. 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 42 1047 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 EXCLUDE 0.976452 432727 0.973925 0.980802 0.826141 25385 1 76 0.00257272 522 0 1.68475e+08 0.0258387 1.13842e+06 1.71772e+08 1.90286e+07 25424 8.35743e+07 0 0.147784 0.980802 0.810281 1.68475e+08 0.00898124 3.67411e+07 1.5201e+07 3.74033e+07 537 3.73122e+07 2.62224e+07 0.00576277 3.7552e+07 50.1602 0.00662751 0.985152 0 50.4466 GTEX-TMKS-0326-SM-3DB8A 0 B1 2 pieces, ~12x10mm. ~40-50% interstitial fat, mildly atrophic-appearing skeletal muscle fibers. 7.6 Muscle Muscle - Skeletal 0011907 47 1043 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 EXCLUDE 0.950692 327456 0.971781 0.955532 0.821341 25760 1 76 0.0028852 519 0 1.6694e+08 0.0279999 2.84675e+06 1.74709e+08 1.85025e+07 25809 8.28082e+07 0 0.15044 0.955532 0.784817 1.6694e+08 0.00970757 3.61521e+07 2.08431e+07 3.67642e+07 540 3.65166e+07 2.47844e+07 0.0062791 3.71478e+07 50.4284 0.0162942 0.960372 0 50.4197 GTEX-TMKS-0426-SM-3DB85 0 B1 2 pieces ~4.5mm d. Good clean specimens, minimal fat. 6.9 Nerve Nerve - Tibial 0001323 50 1040 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 EXCLUDE 0.95856 386131 0.962267 0.962476 0.756693 26411 1 76 0.00275464 376 0 1.44745e+08 0.0374896 863181 1.50388e+08 1.41741e+07 26473 7.1803e+07 0 0.205574 0.962476 0.728299 1.44745e+08 0.00902911 3.1241e+07 1.41726e+07 3.17577e+07 404 3.16813e+07 1.82821e+07 0.00587911 3.18759e+07 50.153 0.00573968 0.966391 0 50.4101 GTEX-TMKS-0426-SM-3L284 0 B1 2 pieces ~4.5mm d. Good clean specimens, minimal fat. Nerve Nerve - Tibial 0001323 50 1040 BP-25496 DNA Isolation from Tissue via QIAgen Spin Column 05/18/2012 GTEx_Batch8_rOM5_Sept12 09/23/2012 Illumina OMNI SNP Array EXCLUDE 8514840003_R01C01 GTEX-TML8-0001-SM-3NMAF B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -47 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991688 980794 0.965047 0.993562 0.824547 22853 1 76 0.00413812 221 0 1.10802e+08 0.0341012 656353 1.1152e+08 1.91599e+07 22896 5.51171e+07 0 0.1405 0.993562 0.819238 1.10802e+08 0.00511579 2.44167e+07 2.15577e+07 2.45531e+07 244 2.46439e+07 2.54141e+07 0.00462603 2.45367e+07 49.891 0.00588553 0.995436 0 50.1393 GTEX-TML8-0004-SM-325A2 B1 Blood Whole Blood 0013756 -47 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTEx_batch7_OM5_May12 06/21/2012 Illumina OMNI SNP Array OMNI 8222003067_R02C01 GTEX-TML8-0004-SM-325HI B1 Blood Whole Blood 0013756 -47 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTEx_batch7_Exome_May12_retry 07/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134871092_R02C01 GTEX-TML8-0004-SM-4X614 B1 Blood Whole Blood 0013756 -47 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-TML8-0004-SM-5SOEP B1 Blood Whole Blood 0013756 -47 BP-23898 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-5226,LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TML8-0005-SM-32QPA B1 8.6 Blood Whole Blood 0013756 -47 BP-23889 RNA isolation_PAXgene Blood RNA (Manual) 04/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.969928 610937 0.963427 0.974311 0.798945 19358 1 76 0.00305945 123 0 8.67304e+07 0.0354701 301951 8.90172e+07 1.28181e+07 19367 4.30233e+07 0 0.164482 0.974311 0.77842 8.67304e+07 0.00921957 1.91491e+07 7.4775e+07 1.95537e+07 144 1.9642e+07 1.8981e+07 0.00612565 1.94441e+07 49.7469 0.00339205 0.978693 0 50.5226 GTEX-TML8-0008-SM-4DXUI B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 254 BP-33651 RNA isolation_Trizol Manual (Cell Pellet) 11/28/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990538 610340 0.97042 0.993019 0.82177 20911 1 76 0.0023097 154 0 7.25611e+07 0.0291667 180833 7.30712e+07 6.23111e+06 20931 3.60953e+07 0 0.14865 0.993019 0.816034 7.25611e+07 0.0028756 1.60748e+07 1.00304e+07 1.60876e+07 159 1.61979e+07 1.51056e+07 0.00259194 1.61358e+07 49.9038 0.00247475 0.9955 0 50.02 GTEX-TML8-0326-SM-4GICN 1 B1 2 pieces: 9x7 & 8x5 mm; panacinar emphysema, no fibrosis or inflammation 6.3 Lung Lung 0008952 121 1092 BP-30218 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.989918 484060 0.970427 0.992355 0.814925 24736 1 76 0.0027894 275 0 9.73784e+07 0.0289883 300043 9.81286e+07 9.47614e+06 24769 4.84434e+07 0 0.155503 0.992355 0.808695 9.73784e+07 0.00404087 2.1515e+07 1.11986e+07 2.16357e+07 261 2.1678e+07 1.73835e+07 0.0034136 2.17067e+07 50.0331 0.00305765 0.994792 0 50.1398 GTEX-TML8-0526-SM-32QOQ 1 B1 2 pieces 7x5 & 10x6 mm; good acinar and islet preservation; one piece has ~20% adipose 6.4 Pancreas Pancreas 0001150 136 1079 BP-25069 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.976365 351494 0.975366 0.98167 0.839339 22641 1 76 0.00291329 132 0 9.24438e+07 0.0243716 346207 9.41699e+07 1.24682e+07 22663 4.58371e+07 0 0.136027 0.98167 0.823953 9.24438e+07 0.00937734 2.07851e+07 2.00324e+07 2.12468e+07 144 2.12489e+07 2.47923e+07 0.00612785 2.12799e+07 50.0365 0.00367641 0.986974 0 50.5493 GTEX-TML8-0726-SM-4DXTT 1 B1 2 pieces 9x7 & 8x6 mm; good glands and surface epithelium 7.7 Cervix Uteri Cervix - Endocervix 0000458 142 1074 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206,LCSET-3797 08/31/2013 TruSeq.v1 RNASEQ 0.98875 501404 0.97188 0.991319 0.819698 22772 1 76 0.00233889 133 0 6.61975e+07 0.0276345 122986 6.67772e+07 4.81947e+06 22791 3.29024e+07 0 0.152182 0.991319 0.812582 6.61975e+07 0.00316358 1.46014e+07 6.55005e+06 1.46364e+07 147 1.46964e+07 1.2763e+07 0.00275017 1.4708e+07 50.0197 0.00184174 0.993887 0 50.0598 GTEX-TML8-0926-SM-4DXSJ 1 B1 2 pieces 9x6 & 9x6 mm; corppora albicantia 7.8 Ovary Ovary 0000992 154 1064 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.972077 552181 0.96242 0.975331 0.768304 23715 1 76 0.00241729 139 0 7.15465e+07 0.0373098 243672 7.33561e+07 7.01422e+06 23747 3.55455e+07 0 0.194117 0.975331 0.749351 7.15465e+07 0.00329758 1.55745e+07 8.98656e+06 1.56441e+07 151 1.57123e+07 1.28119e+07 0.00285596 1.57369e+07 50.039 0.00332177 0.978586 0 50.1115 GTEX-TML8-1126-SM-4DXSS 1 B1 6 pieces up to 7x4 mm; good mucosal preservation 8 Vagina Vagina 0000996 160 1059 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987875 439829 0.971924 0.990839 0.798485 23175 1 76 0.00253397 146 0 7.06545e+07 0.0277504 214709 7.13077e+07 6.41868e+06 23196 3.51256e+07 0 0.173439 0.990839 0.79117 7.06545e+07 0.00356612 1.57015e+07 1.13022e+07 1.57285e+07 154 1.58015e+07 1.29526e+07 0.0030485 1.58341e+07 50.0515 0.00301102 0.993804 0 50.043 GTEX-TML8-1226-SM-32QON 1 B1 2 pieces 11x9 & 9x8 mm; atrophic ductal mammary tissue, mostly adipose; largest piece has a central hollow defect 6.7 Breast Breast - Mammary Tissue 0008367 166 1055 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.981144 268980 0.96637 0.985582 0.756149 26126 1 76 0.00285769 190 0 1.06069e+08 0.0331771 695997 1.0762e+08 1.38689e+07 26174 5.25995e+07 0 0.210221 0.985582 0.745246 1.06069e+08 0.00860066 2.29256e+07 9.76677e+06 2.31687e+07 227 2.31802e+07 1.53503e+07 0.00571625 2.33515e+07 50.1841 0.00646715 0.990019 0 50.2637 GTEX-TML8-1326-SM-4DXTO 1 B1 6 pieces up to 8x3 mm; good mucosal preservation 7.2 Colon Colon - Transverse 0001157 201 1021 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986299 349942 0.972403 0.989276 0.814552 22174 1 76 0.00325994 125 0 5.6134e+07 0.0264223 1.3497e+06 5.67426e+07 5.06248e+06 22192 2.78671e+07 0 0.15785 0.989276 0.805817 5.6134e+07 0.00418343 1.24038e+07 7.71637e+06 1.24272e+07 136 1.24276e+07 7.85492e+06 0.0037203 1.25567e+07 50.2585 0.0237864 0.992252 0 50.0471 GTEX-TML8-1426-SM-4DXUT 1 B1 6 pieces up to 10x4 mm; good muscle 7.3 Esophagus Esophagus - Muscularis 0004648 206 1017 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990328 296693 0.971548 0.992728 0.824098 21566 1 76 0.00249805 111 0 5.22313e+07 0.0281342 484643 5.26139e+07 4.69678e+06 21580 2.59798e+07 0 0.14745 0.992728 0.818105 5.22313e+07 0.00322778 1.12146e+07 5.03111e+06 1.12144e+07 117 1.12224e+07 9.53970e+06 0.00286203 1.13276e+07 50.2332 0.00921131 0.995128 0 49.9994 GTEX-TML8-1526-SM-4DXUX 1 B1 6 pieces up to 8x2 mm; largest piece has an ulcer with acute inflammation 9.1 Esophagus Esophagus - Mucosa 0006920 209 1016 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987667 324073 0.97312 0.990223 0.811902 22227 1 76 0.0027082 132 0 6.06309e+07 0.0263423 434958 6.12295e+07 5.54356e+06 22244 3.01549e+07 0 0.161218 0.990223 0.803964 6.06309e+07 0.00354549 1.35108e+07 8.81643e+06 1.35066e+07 133 1.35359e+07 1.16517e+07 0.00312576 1.36316e+07 50.176 0.00710373 0.99278 0 49.9921 GTEX-TML8-1626-SM-32QOO 0 B1 2 pieces 3x1 & 2x1 mm; ~30 to 50% surrounding adipose 9.3 Nerve Nerve - Tibial 0001323 246 980 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.953864 259444 0.965455 0.95911 0.759703 25173 1 76 0.0026942 195 0 1.00832e+08 0.0342171 375481 1.05131e+08 1.50198e+07 25226 4.99536e+07 0 0.205752 0.95911 0.728639 1.00832e+08 0.0088074 2.18751e+07 8.3686e+06 2.21794e+07 218 2.22193e+07 1.56486e+07 0.00573408 2.23442e+07 50.1401 0.00357157 0.964356 0 50.3454 GTEX-TML8-1826-SM-32QOR 1 B1 2 pieces 12x10 & 10x7 mm; larger piece has numerous tissue artifacts, e.g. fractures; smaller piece has 3x3 mm adipose on one surface 8.6 Muscle Muscle - Skeletal 0011907 254 974 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.951854 344787 0.982062 0.956031 0.870882 21897 1 76 0.0025131 211 0 1.09823e+08 0.0175945 617032 1.14874e+08 1.55974e+07 21912 5.45332e+07 0 0.111181 0.956031 0.83259 1.09823e+08 0.00836261 2.32842e+07 1.13767e+07 2.37543e+07 233 2.37465e+07 2.31342e+07 0.00542507 2.37069e+07 49.9583 0.00537138 0.960209 0 50.4997 GTEX-TML8-1926-SM-32QOS 1 B1 6 pieces up to 8x3 mm; subcutaneous fat well trimmed; numerous tissue fractures in dermis 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 256 972 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.785246 357326 0.972564 0.795814 0.842894 22935 1 76 0.00275284 157 0 6.39953e+07 0.0271315 293686 8.0415e+07 1.3077e+07 22949 3.14421e+07 0 0.12967 0.795814 0.670786 6.39953e+07 0.00904534 1.35592e+07 7.17702e+06 1.37399e+07 149 1.39997e+07 1.15711e+07 0.00585731 1.41047e+07 50.1868 0.00365213 0.806381 0 50.3309 GTEX-TML8-2026-SM-32QOP 1 B1 2 pieces 16x9 & 9x8 mm; large central hollow defects in each piece, probably poorly fixed 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 258 971 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1667 09/02/2012 TruSeq.v1 RNASEQ 0.959044 181346 0.972402 0.963457 0.796886 24391 1 76 0.00277235 187 0 9.60592e+07 0.0272968 498458 9.97027e+07 1.29091e+07 24428 4.76602e+07 0 0.175516 0.963457 0.767765 9.60592e+07 0.0084749 2.08476e+07 8.79e+06 2.11304e+07 212 2.11817e+07 1.5655e+07 0.00561056 2.12075e+07 50.0304 0.00499944 0.967869 0 50.3368 GTEX-TMMY-0003-SM-3G3SV C1 Blood Whole Blood 0013756 255 BP-23932 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840002_R04C01 GTEX-TMMY-0003-SM-3G3TW C1 Blood Whole Blood 0013756 255 BP-23932 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R02C02 GTEX-TMMY-0003-SM-4X62G C1 Blood Whole Blood 0013756 255 BP-23932 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-TMMY-0003-SM-5SOES C1 Blood Whole Blood 0013756 255 BP-23932 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/09/2012 LCSET-5226,LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TMMY-0005-SM-33HBN C1 8.3 Blood Whole Blood 0013756 255 BP-23992 RNA isolation_PAXgene Blood RNA (Manual) 04/10/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.96631 660237 0.970593 0.969751 0.777739 22638 1 76 0.00266851 218 0 1.61656e+08 0.0264318 650482 1.66699e+08 1.61223e+07 22668 7.99987e+07 0 0.192855 0.969751 0.754213 1.61656e+08 0.00741476 3.62449e+07 1.3265e+08 3.70336e+07 261 3.70202e+07 3.45279e+07 0.00503321 3.68213e+07 49.8653 0.00390214 0.973192 0 50.5382 GTEX-TMMY-0008-SM-4DXU3 C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 360 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989111 541963 0.975269 0.992358 0.840743 20842 1 76 0.00205617 176 0 7.45229e+07 0.0243348 152540 7.50969e+07 7.08723e+06 20865 3.7053e+07 0 0.134526 0.992358 0.834318 7.45229e+07 0.0026732 1.66275e+07 9.29901e+06 1.65881e+07 167 1.67137e+07 1.6841e+07 0.00236368 1.67382e+07 50.0366 0.00203124 0.995604 0 49.9407 GTEX-TMMY-0126-SM-4DXTP 1 C1 2 pieces ~13x3mm, all layers of cortex seen; discontinuous rim of adherent fat up to ~0.7mm 9.4 Adrenal Gland Adrenal Gland 0002369 324 1285 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990213 400897 0.976961 0.992781 0.83976 22206 1 76 0.00223298 200 0 7.86522e+07 0.0227171 1.12986e+06 7.92241e+07 7.01862e+06 22225 3.91327e+07 0 0.137201 0.992781 0.833698 7.86522e+07 0.0029872 1.74095e+07 8.53186e+06 1.74623e+07 217 1.75174e+07 1.32828e+07 0.00260911 1.75372e+07 50.0283 0.0142616 0.995349 0 50.0756 GTEX-TMMY-0226-SM-33HBA 0 C1 6 pieces ~6x2.5mm; squamous epithelium is ~2-3% of thickness 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 359 1250 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.422848 69549 0.968858 0.429509 0.801421 21584 1 76 0.00243398 146 0 3.59218e+07 0.0308918 222865 8.36347e+07 1.09131e+07 21599 1.75482e+07 0 0.167437 0.429509 0.344217 3.59218e+07 0.00897179 7.58703e+06 4.55934e+06 7.79194e+06 116 8.02676e+06 5.71805e+06 0.0056522 7.88839e+06 49.5653 0.00266474 0.436169 0 50.6662 GTEX-TMMY-0326-SM-33HBF 0 C1 2 pieces ~7x6mm 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 363 1247 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.869951 1.05002e+07 0.600603 0.872457 0.236245 23733 1 76 0.00243494 132 0 1.17344e+08 0.394966 2.6922e+06 1.34499e+08 1.20501e+07 23802 5.80836e+07 0 0.364358 0.872457 0.206114 1.17344e+08 0.00705357 1.5128e+07 5.49024e+08 1.71985e+07 141 1.72202e+07 4.39254e+06 0.00473762 1.56382e+07 47.5926 0.0200166 0.874964 0 53.2026 GTEX-TMMY-0426-SM-33HBB 0 C1 2 pieces ~8x7mm, minimal interstitial fat 6.9 Muscle Muscle - Skeletal 0011907 368 1242 BP-25072 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.973378 363198 0.981253 0.976147 0.864522 22330 1 76 0.00211836 525 0 1.77844e+08 0.0184894 2.257e+06 1.8219e+08 1.51487e+07 22354 8.83731e+07 0 0.116731 0.976147 0.843901 1.77844e+08 0.00641506 3.82374e+07 1.7584e+07 3.86117e+07 546 3.85773e+07 3.31607e+07 0.00426061 3.87217e+07 50.0934 0.0123881 0.978916 0 50.2435 GTEX-TMMY-0526-SM-33HBC 0 C1 2 pieces ~4mm d. Reasonably clean specimens, discontinuous rim of adherent fat up to ~0.2-0.3mm 7.2 Nerve Nerve - Tibial 0001323 383 1229 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.860404 317532 0.966171 0.863015 0.753859 25134 1 76 0.00237279 356 0 1.31822e+08 0.0335246 528491 1.52746e+08 1.41894e+07 25189 6.53786e+07 0 0.212313 0.863015 0.650592 1.31822e+08 0.00670449 2.87516e+07 1.12012e+07 2.91832e+07 353 2.91857e+07 1.82637e+07 0.00453209 2.91319e+07 49.9539 0.00345993 0.865627 0 50.3725 GTEX-TMMY-0626-SM-33HBD 0 C1 2 pieces ~1.5-2mm d. Good clean specimens, minimal atherosclerosis 8.2 Blood Vessel Artery - Tibial 0007610 385 1228 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.677262 193992 0.97186 0.680166 0.821247 22821 1 76 0.00222304 200 0 9.11778e+07 0.0276686 384386 1.34052e+08 1.6319e+07 22849 4.5137e+07 0 0.150613 0.680166 0.558584 9.11778e+07 0.00671169 1.95099e+07 8.25761e+06 1.98472e+07 206 1.9951e+07 1.67462e+07 0.00445779 1.97727e+07 49.7756 0.00286743 0.683069 0 50.4285 GTEX-TMMY-0726-SM-33HBE 1 C1 2 pieces ~8x5mm. Fibrocystic changes. Cystic ducts enircled; normal TDLUs ensquared; 0.5mm focus of apocrine metaplasia encircled and ensquared 6.9 Breast Breast - Mammary Tissue 0008367 420 1194 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.845842 386237 0.96911 0.848931 0.76953 26873 1 76 0.00235415 525 0 1.55119e+08 0.0304088 632595 1.82723e+08 1.7781e+07 26952 7.69062e+07 0 0.199579 0.848931 0.653278 1.55119e+08 0.00712907 3.39227e+07 1.57523e+07 3.43284e+07 475 3.44589e+07 2.47951e+07 0.00473292 3.43372e+07 49.9116 0.00346204 0.85202 0 50.2972 GTEX-TMMY-0826-SM-33HB9 1 C1 2 ~7x6mm pieces. Diffuse Hashimoto'sthyroiditis with regression and fibrotic areas. Representative lymphoid aggregates encircled 7 Thyroid Thyroid 0002046 423 1191 BP-25076 RNA isolation_PAXgene Tissue miRNA 05/07/2012 LCSET-1668 09/11/2012 TruSeq.v1 RNASEQ 0.873121 487561 0.959048 0.876051 0.734369 26754 1 76 0.00268759 276 0 1.25629e+08 0.0400778 881716 1.43403e+08 1.32945e+07 26815 6.22839e+07 0 0.224678 0.876051 0.643345 1.25629e+08 0.00700975 2.74701e+07 2.03918e+07 2.7661e+07 302 2.77287e+07 1.6657e+07 0.00484144 2.77931e+07 50.0581 0.00614851 0.878982 0 50.1731 GTEX-TMMY-0926-SM-33HBG 1 C1 2 pieces ~7x5mm. Minimal congestion/edema; bronchial mucosa remarkably well preserved, encircled. 8.6 Lung Lung 0008952 425 1190 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1668 09/11/2012 TruSeq.v1 EXCLUDE 0.90129 297419 0.967002 0.904794 0.773907 26860 1 76 0.00238638 381 0 1.36669e+08 0.0325859 584660 1.5105e+08 1.42656e+07 26912 6.77912e+07 0 0.193095 0.904794 0.700226 1.36669e+08 0.00710311 2.99481e+07 1.29503e+07 3.03659e+07 411 3.04681e+07 2.26879e+07 0.00473561 3.0348e+07 49.9012 0.00387064 0.908299 0 50.3464 GTEX-TMMY-0926-SM-4TT1Z 1 C1 2 pieces ~7x5mm. Minimal congestion/edema; bronchial mucosa remarkably well preserved, encircled. 8.6 Lung Lung 0008952 425 1190 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991321 1.06602e+06 0.968295 0.993298 0.790609 27228 1 76 0.00256986 383 0 1.62683e+08 0.0312647 630330 1.6378e+08 1.29494e+07 27290 8.09197e+07 0 0.177686 0.993298 0.785311 1.62683e+08 0.00317933 3.59095e+07 1.77414e+07 3.61098e+07 410 3.61365e+07 2.90036e+07 0.00287399 3.61912e+07 50.0378 0.00384863 0.995275 0 50.1391 GTEX-TMMY-0926-SM-4VBQZ 1 C1 2 pieces ~7x5mm. Minimal congestion/edema; bronchial mucosa remarkably well preserved, encircled. 8.6 Lung Lung 0008952 425 1190 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-4038 10/09/2013 TruSeq.v1 EXCLUDE 0.983986 422574 0.969683 0.988915 0.815845 25378 1 76 0.003336 277 0 1.06349e+08 0.0299198 447585 1.07542e+08 1.06587e+07 25416 5.2753e+07 0 0.153839 0.988915 0.806801 1.06349e+08 0.00577271 2.34215e+07 1.07675e+07 2.34857e+07 291 2.36261e+07 1.76937e+07 0.00454828 2.37995e+07 50.1828 0.00416197 0.993843 0 50.0684 GTEX-TMMY-0926-SM-4WKH4 1 C1 2 pieces ~7x5mm. Minimal congestion/edema; bronchial mucosa remarkably well preserved, encircled. 8.6 Lung Lung 0008952 425 1190 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-4170 10/28/2013 TruSeq.v1 EXCLUDE 0.991134 404985 0.969812 0.993345 0.799294 24088 1 76 0.00211271 166 0 7.45285e+07 0.0297795 295002 7.50278e+07 5.63979e+06 24119 3.70595e+07 0 0.170518 0.993345 0.793974 7.45285e+07 0.00302315 1.6475e+07 6.87706e+06 1.65339e+07 179 1.65313e+07 1.30748e+07 0.00256692 1.66429e+07 50.1682 0.0039319 0.995556 0 50.0892 GTEX-TMMY-1026-SM-4DXTI 1 C1 6 pieces ~7x1.5mm, minimal athersclerosis 8.1 Blood Vessel Artery - Aorta 0001496 427 1189 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986183 500883 0.971929 0.989882 0.815752 21625 1 76 0.00224634 146 0 7.31024e+07 0.027705 174371 7.38496e+07 7.04532e+06 21646 3.63146e+07 0 0.156177 0.989882 0.807499 7.31024e+07 0.0031875 1.57309e+07 6.53576e+06 1.57423e+07 164 1.58245e+07 1.35027e+07 0.00271516 1.59102e+07 50.135 0.00236117 0.993581 0 50.0181 GTEX-TMMY-1126-SM-4DXSX 1 C1 6 pieces ~6x1.5mm. Squamous mucosa is ~10-15% of thickness 8.2 Esophagus Esophagus - Mucosa 0006920 429 1188 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989226 441159 0.976195 0.99153 0.825373 22898 1 76 0.00214842 145 0 7.50962e+07 0.0234729 192335 7.57377e+07 6.32246e+06 22917 3.73663e+07 0 0.150822 0.99153 0.818382 7.50962e+07 0.00291257 1.69605e+07 9.45611e+06 1.69293e+07 162 1.69932e+07 1.56721e+07 0.00252961 1.70667e+07 50.1079 0.00253949 0.993834 0 49.954 GTEX-TMMY-1226-SM-4DXT6 1 C1 6 pieces, ~7x2.5mm 7.7 Esophagus Esophagus - Muscularis 0004648 431 1187 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987358 385922 0.973475 0.990101 0.820654 21475 1 76 0.00225091 125 0 5.78969e+07 0.02623 335942 5.84758e+07 5.55911e+06 21492 2.87915e+07 0 0.152821 0.990101 0.81253 5.78969e+07 0.00303712 1.25911e+07 5.26202e+06 1.26024e+07 136 1.26338e+07 1.016e+07 0.00264293 1.27102e+07 50.1506 0.00574498 0.992844 0 50.0224 GTEX-TMMY-1326-SM-4DXU9 1 C1 2 pieces, ~8x7mm, remarkably well-preserved. Islets well-visualized and numerous; representative ones encircled 6.9 Pancreas Pancreas 0001150 433 1186 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985267 349869 0.977188 0.988822 0.839255 21188 1 76 0.00245821 102 0 6.97025e+07 0.0224928 149056 7.04904e+07 6.52434e+06 21205 3.46261e+07 0 0.137933 0.988822 0.829874 6.97025e+07 0.0033883 1.5999e+07 1.84354e+07 1.6175e+07 109 1.62174e+07 2.00381e+07 0.00292158 1.62072e+07 49.9843 0.00211456 0.992377 0 50.2735 GTEX-TMMY-1526-SM-4DXST 2 C1 6 pieces ~7x5mm. Urothelium partly sloughed but better preserved than usual 8 Bladder Bladder 0001255 439 1181 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988508 369265 0.97562 0.991073 0.823269 22184 1 76 0.00222215 144 0 6.80701e+07 0.0240411 283345 6.86832e+07 6.20003e+06 22201 3.38537e+07 0 0.152351 0.991073 0.81592 6.80701e+07 0.00305874 1.4772e+07 6.2488e+06 1.47747e+07 154 1.47989e+07 1.29282e+07 0.00263936 1.49152e+07 50.1956 0.00412539 0.993638 0 50.0046 GTEX-TMMY-1626-SM-4DXTY 2 C1 6 pieces ~7x3mm. Mucosa partly autolyzed on luminal side, ~20% of thickness 8 Stomach Stomach 0000945 442 1180 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985998 404776 0.973057 0.989116 0.802749 23289 1 76 0.00232749 220 0 7.00159e+07 0.0265399 357539 7.07863e+07 6.69228e+06 23322 3.47871e+07 0 0.170307 0.989116 0.794013 7.00159e+07 0.00319195 1.58025e+07 3.52758e+07 1.58296e+07 172 1.59301e+07 1.50842e+07 0.00275835 1.59147e+07 49.9758 0.00505096 0.992234 0 50.0427 GTEX-TMMY-1726-SM-4DXTD 1 C1 2 pieces ~8x7mm, typical post menopausal atrophy of cortex 7.9 Ovary Ovary 0000992 445 1177 BP-25192 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986363 533841 0.970675 0.989922 0.764273 22589 1 76 0.00220991 138 0 6.71246e+07 0.0290669 119661 6.7808e+07 6.33427e+06 22624 3.33427e+07 0 0.206401 0.989922 0.756571 6.71246e+07 0.00302599 1.47908e+07 7.71336e+06 1.48174e+07 145 1.49065e+07 1.2084e+07 0.00261648 1.49347e+07 50.0474 0.0017647 0.99348 0 50.0449 GTEX-TMMY-1926-SM-4DXUU 1 C1 6 pieces ~5x5mm. Squamous mucosa is ~3-5% of thickness 8 Vagina Vagina 0000996 449 1175 BP-25192 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987955 436368 0.97 0.990876 0.771741 23323 1 76 0.00229136 138 0 6.61201e+07 0.0297454 190352 6.67289e+07 6.29515e+06 23347 3.28646e+07 0 0.19826 0.990876 0.764699 6.61201e+07 0.00315113 1.46179e+07 8.19533e+06 1.46324e+07 146 1.46829e+07 1.131e+07 0.00271998 1.47575e+07 50.1267 0.00285262 0.993797 0 50.0248 GTEX-TMMY-2226-SM-4DXTN 1 C1 2 pieces ~7x7mm. All myometrium; no endometrial elements noted 7.5 Uterus Uterus 0000995 456 1170 BP-25192 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.98943 431881 0.970765 0.992094 0.81879 21797 1 76 0.00218834 140 0 6.35967e+07 0.0289495 151759 6.41035e+07 5.80073e+06 21815 3.16211e+07 0 0.151974 0.992094 0.812317 6.35967e+07 0.00308984 1.38381e+07 5.54711e+06 1.38574e+07 148 1.38732e+07 1.14583e+07 0.00263788 1.39837e+07 50.1983 0.00236741 0.994759 0 50.0348 GTEX-TMZS-0001-SM-3P61Q B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -136 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952312 705443 0.972016 0.97385 0.847467 22037 1 76 0.003301 225 0 1.03518e+08 0.0273131 756211 1.06298e+08 1.40921e+07 22072 5.04831e+07 0 0.124549 0.97385 0.825305 1.03518e+08 0.00454089 2.26231e+07 1.53145e+07 2.27238e+07 247 2.37539e+07 2.62504e+07 0.00390723 2.36585e+07 49.8994 0.00711406 0.995387 0 50.1111 GTEX-TMZS-0002-SM-3G3S5 B1 Blood Whole Blood 0013756 -136 BP-24012 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003061_R02C01 GTEX-TMZS-0002-SM-3G3T6 B1 Blood Whole Blood 0013756 -136 BP-24012 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R04C02 GTEX-TMZS-0002-SM-3UZF4 B1 Blood Whole Blood 0013756 -136 BP-24012 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-TMZS-0002-SM-5URDR B1 Blood Whole Blood 0013756 -136 BP-24012 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/10/2012 LCSET-5270,LCSET-5433 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TMZS-0006-SM-3DB8G B1 8.7 Blood Whole Blood 0013756 -136 BP-23992 RNA isolation_PAXgene Blood RNA (Manual) 04/10/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.969477 524101 0.961267 0.970439 0.802929 19378 1 76 0.00286469 130 0 7.68536e+07 0.0380318 264648 7.91946e+07 6.69967e+06 19390 3.82102e+07 0 0.158338 0.970439 0.779194 7.68536e+07 0.00429723 1.69886e+07 5.10082e+07 1.73306e+07 147 1.73727e+07 1.64898e+07 0.00358025 1.70213e+07 49.4891 0.00334174 0.971402 0 50.4984 GTEX-TMZS-0008-SM-47JWM B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 46 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989691 543433 0.97458 0.992665 0.840781 20954 1 76 0.0022875 182 0 7.50508e+07 0.0250212 292328 7.56054e+07 8.06302e+06 20977 3.73101e+07 0 0.133798 0.992665 0.834614 7.50508e+07 0.00269272 1.67168e+07 9.26093e+06 1.6718e+07 167 1.68255e+07 1.68513e+07 0.0024895 1.68298e+07 50.0063 0.0038665 0.995638 0 50.0018 GTEX-TMZS-0126-SM-3DB9Q 0 B1 6 pieces up to 10x3 mm; well trimmed of subcutaneous adipose 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 49 1082 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.870372 112458 0.970308 0.872056 0.825066 22479 1 76 0.00254803 137 0 5.89218e+07 0.0295289 681651 6.75665e+07 6.4871e+06 22495 2.92456e+07 0 0.145242 0.872056 0.719504 5.89218e+07 0.00441366 1.29004e+07 7.44736e+06 1.31145e+07 148 1.30616e+07 8.45558e+06 0.00347904 1.30602e+07 49.9972 0.0100886 0.87374 0 50.4114 GTEX-TMZS-0226-SM-3DB9N 0 B1 2 pieces 13x6 & 11x8 mm; central holes in large aliquots 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 52 1080 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.954846 166069 0.974345 0.955639 0.840811 22546 1 76 0.00243324 206 0 7.77053e+07 0.0253894 1.01961e+06 8.13124e+07 6.65814e+06 22564 3.86577e+07 0 0.133534 0.955639 0.803512 7.77053e+07 0.00380591 1.69981e+07 8.96394e+06 1.72557e+07 219 1.71925e+07 1.17785e+07 0.003119 1.71189e+07 49.8927 0.0125394 0.956431 0 50.376 GTEX-TMZS-0326-SM-3DB9P 0 B1 2 pieces 10x9 & 8x5 mm; ~20% interspersed adipose in smaller aliquot, <5% in larger; no obvious atrophy 8.1 Muscle Muscle - Skeletal 0011907 56 1077 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.406243 95220 0.977647 0.402931 0.854314 18615 1 76 0.00232169 92 0 3.64672e+07 0.0220039 615619 9.0505e+07 1.012e+07 18622 1.78559e+07 0 0.123333 0.402931 0.344229 3.64672e+07 0.006017 7.85016e+06 4.51559e+06 8.16792e+06 106 7.97946e+06 7.2499e+06 0.00418454 7.75489e+06 49.2864 0.00680204 0.399618 0 50.9919 GTEX-TSE9-0002-SM-3G3SA C1 Blood Whole Blood 0013756 894 BP-24130 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/12/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003061_R03C01 GTEX-TSE9-0002-SM-3G3TB C1 Blood Whole Blood 0013756 894 BP-24130 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/12/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R05C02 GTEX-TSE9-0002-SM-3USSJ C1 Blood Whole Blood 0013756 894 BP-24130 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/12/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-TSE9-0002-SM-5URBA C1 Blood Whole Blood 0013756 894 BP-24130 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/12/2012 LCSET-5270,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-TSE9-0005-SM-4DXUF C1 7.5 Blood Whole Blood 0013756 894 BP-24229 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2012 LCSET-3309 06/09/2013 TruSeq.v1 RNASEQ 0.978947 1.1933e+06 0.925108 0.981816 0.721719 17193 1 76 0.00214921 98 0 6.47265e+07 0.0743639 182625 6.59252e+07 4.28763e+06 17197 3.21604e+07 0 0.203389 0.981816 0.708595 6.47265e+07 0.00344732 1.40133e+07 1.07071e+08 1.42552e+07 113 1.427e+07 1.36753e+07 0.00279637 1.42224e+07 49.9165 0.00277018 0.984686 0 50.4278 GTEX-TSE9-0008-SM-4DXT8 C1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 1024 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987193 631710 0.970866 0.990276 0.836927 21245 1 76 0.00205631 166 0 7.45079e+07 0.0287792 244988 7.52395e+07 6.99745e+06 21271 3.70439e+07 0 0.133938 0.990276 0.828789 7.45079e+07 0.00276139 1.65233e+07 1.23853e+07 1.65342e+07 162 1.66457e+07 1.74447e+07 0.00240776 1.66383e+07 49.9888 0.00325611 0.993359 0 50.0165 GTEX-TSE9-0011-R10A-SM-3DB7O C1, A1 7 Brain Brain - Frontal Cortex (BA9) 0009834 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.976182 742265 0.971056 0.981662 0.863936 25475 1 76 0.00235632 518 0 1.53137e+08 0.0285746 1.12934e+07 1.55998e+08 1.70863e+07 25507 7.58676e+07 0 0.10712 0.981662 0.848093 1.53137e+08 0.00931591 3.36985e+07 2.39158e+07 3.4188e+07 542 3.4025e+07 1.7561e+07 0.00581669 3.45824e+07 50.4062 0.072395 0.987143 0 50.3605 GTEX-TSE9-0011-R11A-SM-3DB7N C1, A1 8.1 Brain Brain - Cerebellar Hemisphere 0002037 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.920252 428144 0.957495 0.924794 0.753821 26554 1 76 0.0025199 379 0 1.62852e+08 0.0419069 3.92754e+06 1.76095e+08 1.96393e+07 26611 8.07128e+07 0 0.203675 0.924794 0.697129 1.62852e+08 0.00875514 3.55983e+07 3.91303e+07 3.60304e+07 423 3.63401e+07 1.88911e+07 0.00562221 3.60159e+07 49.776 0.0223035 0.929336 0 50.3016 GTEX-TSE9-0011-R1A-SM-3DB7E C1, A1 6.4 Brain Brain - Hippocampus 0001954 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.589005 278889 0.964186 0.594925 0.8533 23136 1 76 0.00235697 158 0 6.877e+07 0.0355492 8.30484e+06 1.15594e+08 1.77995e+07 23146 3.38664e+07 0 0.110885 0.594925 0.50765 6.877e+07 0.00967683 1.51476e+07 1.46587e+07 1.53089e+07 201 1.54445e+07 6.0592e+06 0.00598048 1.56164e+07 50.2766 0.0718447 0.600846 0 50.2647 GTEX-TSE9-0011-R4A-SM-3DB7H C1, A1 6.9 Brain Brain - Amygdala 0001876 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.850225 309583 0.967951 0.856217 0.859217 25038 1 76 0.00229761 517 0 1.11327e+08 0.0317708 1.01771e+07 1.30022e+08 1.59542e+07 25058 5.50715e+07 0 0.108734 0.856217 0.735676 1.11327e+08 0.00968719 2.45343e+07 1.77334e+07 2.4833e+07 476 2.49463e+07 1.08787e+07 0.00596655 2.5115e+07 50.1684 0.0782723 0.862208 0 50.3026 GTEX-TSE9-0011-R5A-SM-3DB7J C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.654868 333332 0.964719 0.658308 0.840029 25780 1 76 0.00233315 372 0 1.23496e+08 0.0350111 1.14937e+07 1.87596e+08 2.30591e+07 25808 6.11708e+07 0 0.12469 0.658308 0.552998 1.23496e+08 0.00918739 2.69521e+07 2.68658e+07 2.75205e+07 415 2.7382e+07 1.11813e+07 0.00574236 2.76266e+07 50.2223 0.0612683 0.661747 0 50.5218 GTEX-TSE9-0011-R6A-SM-3DB7L C1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.920652 483478 0.966798 0.924439 0.84221 26485 1 76 0.00227696 519 0 1.53587e+08 0.0328833 1.40991e+07 1.66141e+08 1.76708e+07 26527 7.62325e+07 0 0.124588 0.924439 0.778572 1.53587e+08 0.00886091 3.36007e+07 2.89496e+07 3.43238e+07 506 3.42969e+07 1.67345e+07 0.00555545 3.4131e+07 49.8787 0.0848621 0.928225 0 50.5323 GTEX-TSE9-0011-R7A-SM-3DB7P C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.613258 259244 0.965266 0.618986 0.842707 23670 1 76 0.00231037 267 0 8.22069e+07 0.034504 1.04385e+07 1.32809e+08 1.84427e+07 23684 4.05552e+07 0 0.122559 0.618986 0.521624 8.22069e+07 0.00965644 1.8022e+07 2.04543e+07 1.83107e+07 290 1.84675e+07 6.8296e+06 0.00594941 1.85164e+07 50.0661 0.078598 0.624714 0 50.3972 GTEX-TSE9-0011-R8A-SM-3DB7R C1, A1 6.8 Brain Brain - Hypothalamus 0001898 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.648673 155105 0.963015 0.656492 0.841568 23583 1 76 0.00245004 152 0 6.12904e+07 0.0367249 5.35284e+06 9.33604e+07 1.20778e+07 23605 3.01266e+07 0 0.121447 0.656492 0.552482 6.12904e+07 0.0100991 1.33595e+07 9.67587e+06 1.36431e+07 169 1.38099e+07 6.66228e+06 0.00622901 1.38722e+07 50.1125 0.0573352 0.66431 0 50.5251 GTEX-TSE9-0011-R9A-SM-3DB7Q C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 900 BP-25400 RNA isolation_PAXgene Tissue miRNA 05/16/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.92107 574208 0.960109 0.926694 0.827945 24729 1 76 0.00253815 521 0 1.35647e+08 0.0394851 1.04964e+07 1.46377e+08 1.70542e+07 24756 6.71129e+07 0 0.132164 0.926694 0.767251 1.35647e+08 0.00963427 2.9808e+07 2.5222e+07 3.07381e+07 552 3.02624e+07 1.38862e+07 0.00606468 3.10448e+07 50.6381 0.071708 0.932318 0 50.7681 GTEX-TSE9-0126-SM-3DB83 1 C1 6 pieces up to 7x3 mm; 0.5 mm subcutaneous adipose on three pieces 8 Skin Skin - Sun Exposed (Lower leg) 0004264 1023 1424 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.293401 112687 0.967595 0.297573 0.749345 22012 1 76 0.00271711 154 0 3.68153e+07 0.0319104 230075 1.23719e+08 1.68617e+07 22028 1.79135e+07 0 0.21825 0.297573 0.222985 3.68153e+07 0.0113144 7.79021e+06 5.04295e+06 8.06646e+06 126 8.28323e+06 5.94003e+06 0.00695547 8.07413e+06 49.3608 0.00185966 0.301745 0 50.8711 GTEX-TSE9-0226-SM-3DB84 1 C1 2 pieces 9x5 & 7x6 mm; ~30% fibrous tissue in 1 and ~10% nerves & artery in other; no artifacts 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 1027 1421 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.964988 405775 0.974644 0.969424 0.784586 25623 1 76 0.00239861 522 0 1.7022e+08 0.0250568 887421 1.75588e+08 1.95104e+07 25679 8.43968e+07 0 0.190057 0.969424 0.760597 1.7022e+08 0.00910741 3.72374e+07 1.7004e+07 3.76406e+07 545 3.77408e+07 2.62399e+07 0.00573766 3.78804e+07 50.0923 0.00505398 0.97386 0 50.2692 GTEX-TSE9-0326-SM-3DB82 1 C1 2 pieces 6x4 & 6x4 mm; ~10% adipose at periphery of each 7.4 Nerve Nerve - Tibial 0001323 1056 1393 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.662819 292821 0.968203 0.66755 0.733378 24173 1 76 0.0025692 181 0 8.48276e+07 0.0315098 342068 1.27073e+08 1.63145e+07 24211 4.18409e+07 0 0.234825 0.66755 0.489567 8.48276e+07 0.00968004 1.84456e+07 9.07969e+06 1.87346e+07 185 1.89321e+07 1.27405e+07 0.00609942 1.8819e+07 49.8503 0.0026919 0.672282 0 50.3886 GTEX-TSE9-0426-SM-3DB81 1 C1 2 pieces 2x1.5 mm each; small vein at edge of one 6.6 Blood Vessel Artery - Tibial 0007610 1058 1391 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.964677 600899 0.972634 0.969504 0.781971 25505 1 76 0.00239917 524 0 1.77288e+08 0.0270757 1.36414e+06 1.82865e+08 2.11204e+07 25574 8.7856e+07 0 0.190663 0.969504 0.758124 1.77288e+08 0.00884059 3.84797e+07 1.65119e+07 3.88526e+07 543 3.89737e+07 2.76303e+07 0.00560385 3.9189e+07 50.1377 0.00745983 0.974331 0 50.2411 GTEX-TSE9-0526-SM-3DB7Z 1 C1 2 pieces 9x4 & 7x5 mm; <10% internal adipose 8.1 Muscle Muscle - Skeletal 0011907 1071 1379 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.691231 160411 0.976825 0.701445 0.83679 22459 1 76 0.00231032 174 0 8.74145e+07 0.0229421 846740 1.24621e+08 1.86236e+07 22479 4.28775e+07 0 0.140034 0.701445 0.586963 8.74145e+07 0.010657 1.85947e+07 1.15878e+07 1.90995e+07 186 1.95737e+07 1.69845e+07 0.00642287 1.92923e+07 49.638 0.00679454 0.71166 0 50.6696 GTEX-TSE9-0626-SM-3DB8B 1 C1 2 pieces 9x7 & 7x6 mm; small foci of lymphoid cells 6.6 Thyroid Thyroid 0002046 1145 1306 BP-25188 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.963842 415645 0.966495 0.969676 0.718774 25930 1 76 0.00263224 223 0 1.26391e+08 0.0331375 407776 1.30343e+08 1.42275e+07 25997 6.25598e+07 0 0.247721 0.969676 0.696977 1.26391e+08 0.00986943 2.74658e+07 1.7054e+07 2.78491e+07 265 2.80494e+07 1.85704e+07 0.00622906 2.79888e+07 49.9459 0.00312848 0.97551 0 50.3465 GTEX-TSE9-0726-SM-3DB8C 1 C1 2 pieces 9x7 & 8x7 mm; moderate alveolar hemorrhages; moderate interstitial fibrosis; no pneumonia or heart failure cells 6.1 Lung Lung 0008952 1154 1298 BP-25190 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.353536 118536 0.97265 0.357038 0.719462 22346 1 76 0.00272572 125 0 5.06179e+07 0.0270342 655921 1.41772e+08 2.03846e+07 22371 2.47287e+07 0 0.253188 0.357038 0.256875 5.06179e+07 0.0107376 1.11044e+07 5.7131e+06 1.11591e+07 132 1.12961e+07 6.12542e+06 0.00669238 1.14317e+07 50.2983 0.00462659 0.360539 0 50.1228 GTEX-TSE9-1226-SM-4DXTM 1 C1 6 pieces up to 6.6x1 mm; focal epithelial sloughing 7.3 Esophagus Esophagus - Mucosa 0006920 1169 1286 BP-25192 RNA isolation_PAXgene Tissue miRNA 05/09/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.984808 308158 0.971521 0.987869 0.774918 22247 1 76 0.00227003 122 0 5.82502e+07 0.0282772 333401 5.89655e+07 5.37274e+06 22265 2.89472e+07 0 0.196603 0.987869 0.765518 5.82502e+07 0.00325177 1.29407e+07 7.22204e+06 1.2974e+07 129 1.30219e+07 1.01977e+07 0.00275938 1.30704e+07 50.093 0.00565417 0.990931 0 50.0642 GTEX-TSE9-2226-SM-4DXUR 1 C1 2 pieces 9x8 & 8x8 mm; atrophic, partly cystic 7.2 Ovary Ovary 0000992 1192 1271 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988799 356207 0.968799 0.991351 0.728019 22631 1 76 0.00227025 145 0 7.20579e+07 0.0309402 102405 7.26866e+07 6.29847e+06 22670 3.58147e+07 0 0.24078 0.991351 0.721723 7.20579e+07 0.00293331 1.58064e+07 1.03059e+07 1.58619e+07 146 1.59178e+07 1.3486e+07 0.00260093 1.59372e+07 50.0305 0.00140886 0.993903 0 50.0875 GTEX-TSE9-2326-SM-EZ6ME 2 C1 2 pieces 4 mm in diameter; epithelium sloughed 5.7 Fallopian Tube Fallopian Tube 0003889 1195 1268 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.987498 201073 0.969813 0.988756 0.736607 25354 1 76 0.00254613 280 0 1.09519e+08 0.0299283 602348 1.10765e+08 8.05988e+06 25411 5.45848e+07 0 0.233206 0.988756 0.728325 1.09519e+08 0.00341677 2.41325e+07 1.26148e+07 2.42092e+07 273 2.41979e+07 1.77318e+07 0.00298089 2.4275e+07 50.0796 0.00543809 0.990014 0 50.0793 GTEX-TSE9-2526-SM-4DXUS 2 C1 6 pieces up to 7x3 mm; epithelium partially sloughed 6.8 Vagina Vagina 0000996 1199 1266 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986542 307528 0.97329 0.989051 0.729682 23132 1 76 0.00239794 129 0 6.42133e+07 0.0263976 253037 6.49242e+07 5.75394e+06 23160 3.19076e+07 0 0.243608 0.989051 0.721693 6.42133e+07 0.00323356 1.4252e+07 6.91722e+06 1.42863e+07 135 1.43379e+07 1.05676e+07 0.00281469 1.43609e+07 50.0399 0.00389742 0.991561 0 50.06 GTEX-TSE9-2626-SM-4DXV2 1 C1 2 pieces 8x6 & 7x6 mm; all myometrium 5.8 Uterus Uterus 0000995 1202 1264 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.983244 318442 0.966035 0.985566 0.736976 23629 1 76 0.00239899 162 0 8.17461e+07 0.0337369 349961 8.29433e+07 7.4615e+06 23679 4.06338e+07 0 0.229059 0.985566 0.726339 8.17461e+07 0.00322334 1.78852e+07 9.58694e+06 1.80183e+07 179 1.8029e+07 1.24665e+07 0.00281019 1.80674e+07 50.0532 0.00421928 0.987888 0 50.1853 GTEX-TSE9-2726-SM-4DXSQ 2 C1 4 pieces up to 6x3 mm; 2 pieces have endocervical glands, none has squamous; consider it endocervix 6.1 Cervix Uteri Cervix - Endocervix 0000458 1205 1262 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.980538 220111 0.972353 0.983688 0.752225 22630 1 76 0.00238987 138 0 6.64071e+07 0.0273441 238845 6.75083e+07 6.36729e+06 22661 3.29831e+07 0 0.220128 0.983688 0.739954 6.64071e+07 0.00327019 1.46366e+07 7.35227e+06 1.46827e+07 145 1.47283e+07 1.14197e+07 0.00282862 1.47991e+07 50.12 0.00353801 0.986838 0 50.0786 GTEX-TSE9-2826-SM-4DXTF 2 C1 4 pieces up to 5x5 mm; none has squamous or glandular elements; consider it ectocervix 6.4 Cervix Uteri Cervix - Ectocervix 0012249 1208 1259 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.984081 254449 0.973474 0.986729 0.757225 22829 1 76 0.00238996 150 0 7.29099e+07 0.0262378 286427 7.38905e+07 6.6779e+06 22853 3.62302e+07 0 0.216249 0.986729 0.747176 7.29099e+07 0.00323241 1.60487e+07 8.05557e+06 1.61078e+07 157 1.61388e+07 1.29587e+07 0.00281006 1.62118e+07 50.1128 0.00387637 0.989377 0 50.0919 GTEX-TSE9-2926-SM-3DB77 2 C1 4 pieces up to 4x4 mm; Purkinje nuclei faint 7.6 Brain Brain - Cerebellum 0002037 1218 1250 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.930087 578809 0.955071 0.934167 0.712078 26826 1 76 0.00272718 521 0 1.48928e+08 0.044388 2.25143e+06 1.59423e+08 1.74952e+07 26891 7.38111e+07 0 0.242993 0.934167 0.6652 1.48928e+08 0.00920762 3.25426e+07 3.85998e+07 3.30002e+07 458 3.32424e+07 1.65487e+07 0.00595325 3.28968e+07 49.7387 0.0141223 0.938247 0 50.3491 GTEX-TSE9-3026-SM-3DB76 2 C1 4 pieces up to 4x4 mm; 7.2 Brain Brain - Cortex 0001870 1220 1249 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.981014 963777 0.965534 0.985387 0.832657 26308 1 76 0.00229609 519 0 1.52875e+08 0.0340845 6.64942e+06 1.55142e+08 1.52176e+07 26340 7.58056e+07 0 0.132877 0.985387 0.82049 1.52875e+08 0.00875077 3.34633e+07 3.00181e+07 3.37512e+07 541 3.37752e+07 1.80968e+07 0.0055091 3.40053e+07 50.1697 0.0428602 0.989761 0 50.2141 GTEX-TSE9-3126-SM-4DXSY 2 C1 1 piece 7x6 mm; 3x1 mm is posterior 7.2 Pituitary Pituitary 0000007 1221 1248 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985708 411308 0.963794 0.989063 0.755732 23350 1 76 0.00227439 120 0 5.8267e+07 0.0359685 308566 5.89113e+07 5.22936e+06 23382 2.89425e+07 0 0.208062 0.989063 0.747467 5.8267e+07 0.0031566 1.2625e+07 9.14293e+06 1.26297e+07 130 1.27019e+07 9.15345e+06 0.002714 1.27428e+07 50.0805 0.0052378 0.992418 0 50.0093 GTEX-U3ZG-0001-SM-47JYF B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -25 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986731 1.46811e+06 0.95782 0.99011 0.823224 21335 1 76 0.00267893 149 0 7.45516e+07 0.0415431 679877 7.52962e+07 8.54835e+06 21353 3.70405e+07 0 0.134595 0.99011 0.815083 7.45516e+07 0.00301663 1.64492e+07 1.10722e+07 1.63279e+07 157 1.64504e+07 1.72373e+07 0.0028472 1.65722e+07 50.1845 0.00902936 0.99349 0 49.8149 GTEX-U3ZG-0002-SM-4YUWL_1 B1 Blood Whole Blood 0013756 -25 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-U3ZG-0002-SM-53IV8 B1 Blood Whole Blood 0013756 -25 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-U3ZG-0002-SM-5SOEN B1 Blood Whole Blood 0013756 -25 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U3ZG-0006-SM-47JWX B1 8.4 Blood Whole Blood 0013756 -25 BP-24229 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.967377 403794 0.981148 0.970413 0.821464 17711 1 76 0.0024081 94 0 8.33652e+07 0.017018 189713 8.59069e+07 8.86898e+06 17714 4.13801e+07 0 0.159684 0.970413 0.797159 8.33652e+07 0.00333503 1.98436e+07 1.35365e+08 1.99218e+07 133 1.99858e+07 2.36305e+07 0.00287011 2.00729e+07 50.1088 0.00220835 0.973448 0 50.0983 GTEX-U3ZG-0008-SM-47JWL B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 37 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.990158 566853 0.974181 0.993107 0.841443 20983 1 76 0.00216538 152 0 6.84086e+07 0.0254601 174525 6.88834e+07 7.37595e+06 21000 3.40007e+07 0 0.132738 0.993107 0.835643 6.84086e+07 0.00268623 1.52816e+07 8.18334e+06 1.5313e+07 145 1.54222e+07 1.6527e+07 0.00242503 1.53764e+07 49.9256 0.00253363 0.996057 0 50.0514 GTEX-U3ZG-0326-SM-47JXN 0 B1 2 pieces, ~8x8mm. ~15-20% interstitial fat 6.8 Muscle Muscle - Skeletal 0011907 46 1098 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986158 259068 0.976801 0.990377 0.844096 20880 1 76 0.00220994 152 0 7.28844e+07 0.0230448 1.50728e+06 7.35926e+07 8.37961e+06 20894 3.61967e+07 0 0.132705 0.990377 0.835973 7.28844e+07 0.00288793 1.61576e+07 8.72541e+06 1.60425e+07 193 1.60526e+07 1.18913e+07 0.00254749 1.64317e+07 50.5835 0.0204814 0.994596 0 49.8214 GTEX-U3ZH-0002-SM-3NMDD B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -15 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988354 872967 0.963921 0.99054 0.835309 22105 1 76 0.00296403 224 0 1.02326e+08 0.0353236 610806 1.03304e+08 1.24997e+07 22136 5.08957e+07 0 0.128612 0.99054 0.827407 1.02326e+08 0.00422575 2.25888e+07 2.26847e+07 2.26899e+07 230 2.27676e+07 2.50678e+07 0.0035935 2.2743e+07 49.973 0.00591273 0.992725 0 50.1116 GTEX-U3ZH-0003-SM-3G3RZ B1 Blood Whole Blood 0013756 -15 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003061_R01C01 GTEX-U3ZH-0003-SM-3G3T1 B1 Blood Whole Blood 0013756 -15 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R03C02 GTEX-U3ZH-0003-SM-3UZF3 B1 Blood Whole Blood 0013756 -15 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-U3ZH-0003-SM-5URBK B1 Blood Whole Blood 0013756 -15 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-5270,LCSET-5436 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U3ZH-0005-SM-3DB72 B1 7.7 Blood Whole Blood 0013756 -15 BP-24229 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.828423 413955 0.97121 0.833575 0.807993 19916 1 76 0.00258934 108 0 7.59347e+07 0.0261674 419268 9.10952e+07 1.09545e+07 19920 3.75258e+07 0 0.163217 0.833575 0.673523 7.59347e+07 0.00996686 1.72951e+07 8.88131e+07 1.76788e+07 124 1.77583e+07 1.8522e+07 0.0062553 1.76852e+07 49.897 0.00460253 0.838728 0 50.5486 GTEX-U3ZH-0008-SM-4DXT2 B1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 249 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.98996 555026 0.97421 0.99243 0.83894 21229 1 76 0.00202014 193 0 7.62551e+07 0.0253914 188836 7.68368e+07 6.96482e+06 21249 3.79419e+07 0 0.13527 0.99243 0.832589 7.62551e+07 0.00263119 1.7048e+07 9.03333e+06 1.70209e+07 179 1.71295e+07 1.67401e+07 0.00232491 1.7119e+07 49.9847 0.00245763 0.994899 0 49.9601 GTEX-U3ZH-0126-SM-4DXUK 1 B1 2 pieces ~10x8mm 6.2 Spleen Spleen 0002106 181 1206 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206,LCSET-3797 08/31/2013 TruSeq.v1 RNASEQ 0.984213 431938 0.964162 0.98699 0.798656 23415 1 76 0.00321095 151 0 7.06841e+07 0.0324538 340208 7.16159e+07 5.28652e+06 23436 3.49976e+07 0 0.165506 0.98699 0.788265 7.06841e+07 0.003913 1.56545e+07 1.3248e+07 1.5677e+07 165 1.57613e+07 1.07303e+07 0.00356099 1.57631e+07 50.0027 0.00475046 0.989766 0 50.0358 GTEX-U3ZH-0226-SM-3DB7B 1 B1 2 pieces ~10x9mm. Patch Hashimoto's thyroiditis, regressive areas noted 6.1 Thyroid Thyroid 0002046 188 1199 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.406774 72767 0.964036 0.417024 0.776852 22552 1 76 0.00287406 121 0 3.34456e+07 0.0353325 240279 8.02008e+07 1.21404e+07 22561 1.62014e+07 0 0.187185 0.417024 0.323966 3.34456e+07 0.0120252 7.06757e+06 4.53580e+06 7.22271e+06 116 7.58551e+06 4.48556e+06 0.00733718 7.4955e+06 49.7016 0.00299597 0.427274 0 50.5428 GTEX-U3ZH-0326-SM-3DB7A 1 B1 2 pieces ~10x8mm. Minimal ischemic damage 8 Heart Heart - Left Ventricle 0006566 190 1197 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.941062 369206 0.980947 0.945288 0.838358 23160 1 76 0.00216632 516 0 1.3802e+08 0.0188529 2.55052e+06 1.46008e+08 1.5654e+07 23191 6.85039e+07 0 0.142589 0.945288 0.792489 1.3802e+08 0.00896156 3.06052e+07 2.15355e+07 3.05786e+07 529 3.05162e+07 1.86289e+07 0.00554876 3.11711e+07 50.5308 0.0174683 0.949513 0 49.9783 GTEX-U3ZH-0326-SM-4WWDX 1 B1 2 pieces ~10x8mm. Minimal ischemic damage 8 Heart Heart - Left Ventricle 0006566 190 1197 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.98749 500899 0.975195 0.990877 0.836028 22024 1 76 0.00232552 266 0 9.79717e+07 0.0245862 1.85603e+06 9.88738e+07 1.32839e+07 22040 4.8695e+07 0 0.139167 0.990877 0.8284 9.79717e+07 0.00388127 2.17003e+07 2.35257e+07 2.12999e+07 295 2.14156e+07 1.54167e+07 0.00310074 2.1874e+07 50.5295 0.0187717 0.994263 0 49.5344 GTEX-U3ZH-0326-SM-51MS7 1 B1 2 pieces ~10x8mm. Minimal ischemic damage 8 Heart Heart - Left Ventricle 0006566 190 1197 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-4207 11/20/2013 TruSeq.v1 EXCLUDE 0.988977 332811 0.982293 0.992801 0.852245 21654 1 76 0.00213596 370 0 1.04872e+08 0.0175374 2.19016e+06 1.05632e+08 2.19387e+07 21667 5.21441e+07 0 0.130048 0.992801 0.84611 1.04872e+08 0.00465849 2.32017e+07 2.87728e+07 2.27702e+07 333 2.28124e+07 1.47003e+07 0.00339237 2.34521e+07 50.6914 0.0207339 0.996625 0 49.5307 GTEX-U3ZH-0426-SM-4DXSE 1 B1 2 pieces ~3mm. Minimal atherosclerosis 8.8 Blood Vessel Artery - Coronary 0001621 191 1197 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988963 393777 0.974218 0.991955 0.843371 21900 1 76 0.00212738 140 0 6.93872e+07 0.0254202 190921 6.995e+07 6.52475e+06 21915 3.44987e+07 0 0.130847 0.991955 0.836587 6.93872e+07 0.00301021 1.4902e+07 5.33277e+06 1.49395e+07 158 1.49703e+07 1.41062e+07 0.00256746 1.5073e+07 50.171 0.00272939 0.994948 0 50.0627 GTEX-U3ZH-0526-SM-3DB75 2 B1 2 pieces ~8x8mm. Atalectatic, focal lymphoid follicle/intrapulmonary lymph node noted, encircled 6.8 Lung Lung 0008952 194 1194 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.896887 323483 0.966289 0.900917 0.728341 27134 1 76 0.00257028 265 0 1.27796e+08 0.0333821 644421 1.41851e+08 1.99053e+07 27200 6.33434e+07 0 0.237947 0.900917 0.656175 1.27796e+08 0.00907798 2.79948e+07 1.27749e+07 2.81972e+07 296 2.82681e+07 1.69706e+07 0.00580957 2.8464e+07 50.1726 0.00454294 0.904947 0 50.1801 GTEX-U3ZH-0626-SM-4DXT3 1 B1 6 pieces ~9x1.5mm. Minimal atherosis 7.9 Blood Vessel Artery - Aorta 0001496 196 1193 BP-25328 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988826 301237 0.973361 0.991191 0.839854 21434 1 76 0.00217667 163 0 7.29338e+07 0.026261 184015 7.3582e+07 6.79865e+06 21448 3.62947e+07 0 0.133507 0.991191 0.832456 7.29338e+07 0.00287666 1.56772e+07 5.86324e+06 1.57412e+07 178 1.57744e+07 1.37516e+07 0.00252583 1.58092e+07 50.0552 0.00250082 0.993555 0 50.1019 GTEX-U3ZH-0926-SM-4DXU4 1 B1 2 pieces ~7x6mm. Largely peripheral stroma/fat, adherent smooth muscle, minimal autolyzed glandular elements 6.9 Prostate Prostate 0002367 207 1183 BP-25324 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987316 340803 0.964131 0.98987 0.713514 24016 1 76 0.00243073 116 0 5.64459e+07 0.0356164 210673 5.70236e+07 5.23938e+06 24049 2.80677e+07 0 0.250616 0.98987 0.706286 5.64459e+07 0.00328411 1.2485e+07 6.91661e+06 1.24871e+07 123 1.25359e+07 7.89765e+06 0.00285632 1.25779e+07 50.0836 0.00369449 0.992424 0 50.0043 GTEX-U3ZH-1026-SM-4DXUZ 1 B1 6 pieces ~6x1.5mm. Squamous mucosa up to ~200 microns thick or ~15% 9 Esophagus Esophagus - Mucosa 0006920 212 1178 BP-25324 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206,LCSET-3797 08/31/2013 TruSeq.v1 RNASEQ 0.988719 431660 0.974904 0.991359 0.814675 22148 1 76 0.00206104 139 0 6.47883e+07 0.024827 161516 6.5353e+07 4.73232e+06 22162 3.22192e+07 0 0.16023 0.991359 0.807635 6.47883e+07 0.00275924 1.46113e+07 7.6809e+06 1.45882e+07 144 1.46618e+07 1.31347e+07 0.00240921 1.47051e+07 50.0737 0.00247144 0.993999 0 49.9604 GTEX-U3ZH-1126-SM-4DXUG 1 B1 6 pieces ~10x4mm 8 Esophagus Esophagus - Muscularis 0004648 213 1178 BP-25324 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988388 264722 0.970088 0.991269 0.80156 21554 1 76 0.00217778 111 0 5.14596e+07 0.0296917 295696 5.19129e+07 4.49604e+06 21569 2.55904e+07 0 0.168527 0.991269 0.794561 5.14596e+07 0.00307704 1.10372e+07 4.6343e+06 1.10596e+07 121 1.1078e+07 8.40902e+06 0.0026261 1.11589e+07 50.1817 0.005696 0.99415 0 50.0506 GTEX-U3ZH-1326-SM-4DXSF 1 B1 6 pieces ~8x3mm. Mucosa remarkably well-preserved, ~10-20% of thickness 7.6 Colon Colon - Transverse 0001157 219 1173 BP-25324 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989176 363992 0.968867 0.991742 0.787972 22946 1 76 0.00220745 131 0 6.46734e+07 0.0308634 441026 6.52119e+07 5.86248e+06 22968 3.21533e+07 0 0.180895 0.991742 0.781465 6.46734e+07 0.00306991 1.39123e+07 5.7929e+06 1.39708e+07 146 1.39961e+07 1.0693e+07 0.00263756 1.40443e+07 50.086 0.00676297 0.994308 0 50.105 GTEX-U3ZH-1426-SM-4DXSR 1 B1 2 pieces ~10x6mm. Numerous ductal units visible, some encircled, evidence of gynecomastoid hyperplasia 7.3 Breast Breast - Mammary Tissue 0008367 225 1167 BP-25324 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987852 363987 0.966114 0.99071 0.754641 24230 1 76 0.00230304 135 0 6.55008e+07 0.0335192 274922 6.6115e+07 5.97369e+06 24256 3.25601e+07 0 0.211474 0.99071 0.74763 6.55008e+07 0.00314668 1.43877e+07 6.55329e+06 1.43851e+07 145 1.44456e+07 1.06096e+07 0.00272364 1.45097e+07 50.1106 0.00415824 0.993568 0 49.9955 GTEX-U3ZH-1526-SM-4DXV1 1 B1 2 pieces ~10x8mm. Spermatogenesis markedly reduced 7 Testis Testis 0000473 228 1164 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987905 515305 0.935868 0.990445 0.736131 30958 1 76 0.00225956 130 0 6.22422e+07 0.0638919 766468 6.28426e+07 5.53061e+06 30995 3.09548e+07 0 0.199737 0.990445 0.729097 6.22422e+07 0.00309239 1.3243e+07 9.25995e+06 1.32333e+07 134 1.32996e+07 9.54724e+06 0.00267491 1.3324e+07 50.0457 0.0121966 0.992985 0 49.9817 GTEX-U3ZH-1626-SM-3DB74 1 B1 2 pieces ~1.5mm d. NOTE: up to 1-1.5mm layer of adherent fat 7 Nerve Nerve - Tibial 0001323 239 1154 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.897779 300677 0.962836 0.901957 0.755413 25687 1 76 0.00248994 280 0 1.21497e+08 0.0369049 571892 1.34703e+08 2.2648e+07 25737 6.02645e+07 0 0.207423 0.901957 0.68135 1.21497e+08 0.00892513 2.64421e+07 1.37006e+07 2.67383e+07 290 2.68139e+07 1.70225e+07 0.00569263 2.68973e+07 50.0776 0.00424556 0.906134 0 50.2786 GTEX-U3ZH-1726-SM-3DB79 1 B1 2 pieces ~1.5mm. NOTE: up to 1.5mm layer of adherent fat and smaller vessels 7.7 Blood Vessel Artery - Tibial 0007610 240 1153 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.952156 448409 0.971431 0.956672 0.813456 24202 1 76 0.00240894 380 0 1.45322e+08 0.0281903 637602 1.51903e+08 1.63511e+07 24242 7.20275e+07 0 0.157975 0.956672 0.778211 1.45322e+08 0.00938326 3.11757e+07 1.09298e+07 3.15539e+07 418 3.16548e+07 2.46406e+07 0.00587964 3.17134e+07 50.0463 0.00419742 0.961189 0 50.3014 GTEX-U3ZH-1926-SM-4DXTR 0 B1 2 pieces ~10x5mm. ~15-20% interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 246 1148 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988985 398105 0.973494 0.991783 0.836943 21210 1 76 0.00198511 139 0 7.194e+07 0.0262076 889507 7.2536e+07 6.72611e+06 21222 3.57908e+07 0 0.13655 0.991783 0.830066 7.194e+07 0.00273678 1.55887e+07 6.96676e+06 1.55846e+07 162 1.56291e+07 1.45186e+07 0.00235989 1.5732e+07 50.1641 0.012263 0.994581 0 49.9934 GTEX-U3ZH-2026-SM-3DB78 0 B1 6 pieces ~7x3mm. Squamous epithelium is 1-2% of thickness 8 Skin Skin - Sun Exposed (Lower leg) 0004264 248 1147 BP-25326 RNA isolation_PAXgene Tissue miRNA 05/14/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.844379 370076 0.966396 0.849133 0.779573 26529 1 76 0.00237329 302 0 1.22181e+08 0.0333307 746875 1.43889e+08 1.60931e+07 26574 6.05416e+07 0 0.186823 0.849133 0.661961 1.22181e+08 0.00972634 2.63814e+07 1.61653e+07 2.6758e+07 321 2.69254e+07 1.93195e+07 0.00602923 2.68662e+07 49.945 0.00519063 0.853886 0 50.3543 GTEX-U3ZM-0002-SM-3NMDM B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -83 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992562 770923 0.97237 0.99461 0.85451 21775 1 76 0.0028916 283 0 1.08112e+08 0.0270243 748613 1.08698e+08 1.29393e+07 21798 5.38255e+07 0 0.11786 0.99461 0.849905 1.08112e+08 0.00419189 2.40732e+07 1.573e+07 2.42924e+07 287 2.43926e+07 2.67753e+07 0.00354041 2.41869e+07 49.7883 0.0068871 0.996659 0 50.2266 GTEX-U3ZM-0004-SM-3G3SF B1 Blood Whole Blood 0013756 -83 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003061_R04C01 GTEX-U3ZM-0004-SM-3G3TG B1 Blood Whole Blood 0013756 -83 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R06C02 GTEX-U3ZM-0004-SM-3USQ6 B1 Blood Whole Blood 0013756 -83 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-U3ZM-0004-SM-5URC4 B1 Blood Whole Blood 0013756 -83 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U3ZM-0008-SM-4DXTQ B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 241 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990754 649415 0.974427 0.993361 0.83926 21046 1 76 0.00201635 182 0 7.97087e+07 0.0251406 196285 8.02414e+07 7.22804e+06 21068 3.96504e+07 0 0.135166 0.993361 0.833689 7.97087e+07 0.00261862 1.78349e+07 9.05732e+06 1.77912e+07 200 1.79166e+07 1.7038e+07 0.0023167 1.79097e+07 49.9904 0.00244618 0.995968 0 49.9388 GTEX-U3ZM-0126-SM-3DB8M 1 B1 2 pieces ~10x7mm 7.2 Thyroid Thyroid 0002046 198 775 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.974725 165750 0.971076 0.975456 0.77692 23152 1 76 0.00215146 164 0 7.87934e+07 0.0286497 256956 8.0776e+07 6.34735e+06 23178 3.9198e+07 0 0.194155 0.975456 0.757851 7.87934e+07 0.00352666 1.73204e+07 7.61348e+06 1.75123e+07 181 1.74913e+07 1.30392e+07 0.00283855 1.73952e+07 49.8623 0.00318109 0.976186 0 50.2754 GTEX-U3ZM-0226-SM-4DXTA 1 B1 2 pieces ~10x8mm. ~2mm focus of medulla, reasonably well preserved, encircled 8.6 Adrenal Gland Adrenal Gland 0002369 201 773 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.990152 390988 0.977466 0.992642 0.839458 22592 1 76 0.00213289 195 0 7.53396e+07 0.0222073 1.45307e+06 7.58981e+07 6.8047e+06 22614 3.74848e+07 0 0.138008 0.992642 0.833281 7.53396e+07 0.00286354 1.67541e+07 7.96134e+06 1.67532e+07 203 1.67764e+07 1.241e+07 0.00249729 1.68978e+07 50.1801 0.019145 0.995132 0 49.9987 GTEX-U3ZM-0326-SM-4DXUJ 1 B1 6 pieces ~9x1.5mm 7.7 Blood Vessel Artery - Aorta 0001496 203 771 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987758 321646 0.977437 0.990867 0.8642 21036 1 76 0.00203269 143 0 6.99492e+07 0.0221705 257289 7.0594e+07 6.67049e+06 21046 3.47719e+07 0 0.113237 0.990867 0.856308 6.99492e+07 0.00297587 1.51181e+07 5.32157e+06 1.51254e+07 165 1.5154e+07 1.46025e+07 0.0025028 1.53013e+07 50.2417 0.00364463 0.993975 0 50.0122 GTEX-U3ZM-0426-SM-3DB73 1 B1 2 pieces, ~9x8mm. Multiple foci of aspirated foreign material in dilated bronchi with acute infammation, patchy acute aspiration pneumonia in parenchyma 7.7 Lung Lung 0008952 207 768 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.953436 322574 0.974863 0.957505 0.828845 25343 1 76 0.00256332 346 0 1.31259e+08 0.0247123 720351 1.37085e+08 1.47288e+07 25376 6.5136e+07 0 0.146018 0.957505 0.793623 1.31259e+08 0.00922076 2.89887e+07 1.19432e+07 2.93936e+07 333 2.94366e+07 2.28026e+07 0.00587789 2.94819e+07 50.0384 0.0052548 0.961574 0 50.3467 GTEX-U3ZM-0426-SM-57WG1 1 B1 2 pieces, ~9x8mm. Multiple foci of aspirated foreign material in dilated bronchi with acute infammation, patchy acute aspiration pneumonia in parenchyma 7.7 Lung Lung 0008952 207 768 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-4416 12/21/2013 TruSeq.v1 EXCLUDE 0.987361 404383 0.975316 0.991073 0.839224 23744 1 76 0.00256913 206 0 8.51000e+07 0.0242601 448698 8.58666e+07 1.31482e+07 23772 4.22662e+07 0 0.136092 0.991073 0.831732 8.51000e+07 0.00435215 1.88516e+07 8.9396e+06 1.90022e+07 232 1.90586e+07 1.5579e+07 0.0034573 1.90983e+07 50.0521 0.00522552 0.994784 0 50.199 GTEX-U3ZM-0426-SM-59HKR 1 B1 2 pieces, ~9x8mm. Multiple foci of aspirated foreign material in dilated bronchi with acute infammation, patchy acute aspiration pneumonia in parenchyma 7.7 Lung Lung 0008952 207 768 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-4419 01/14/2014 TruSeq.v1 EXCLUDE 0.982836 280287 0.974884 0.989174 0.838782 23344 1 76 0.00246562 136 0 7.0049e+07 0.0246945 367786 7.08156e+07 1.28484e+07 23368 3.47169e+07 0 0.136103 0.989174 0.8297 7.0049e+07 0.00869801 1.54488e+07 7.42546e+06 1.56033e+07 157 1.57377e+07 1.2899e+07 0.00556185 1.57356e+07 49.9966 0.00519357 0.995511 0 50.2489 GTEX-U3ZM-0526-SM-4DXTB 0 B1 6 pieces ~7x4mm. Squamous mucosa is ~10% of thickness, well-preserved 9.4 Esophagus Esophagus - Mucosa 0006920 214 761 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986321 481480 0.976 0.989999 0.830579 21019 1 76 0.00221905 131 0 5.82416e+07 0.0235452 359726 5.88299e+07 5.01988e+06 21032 2.89222e+07 0 0.145422 0.989999 0.822272 5.82416e+07 0.00316022 1.31148e+07 7.62751e+06 1.30883e+07 133 1.31752e+07 1.17562e+07 0.00268789 1.32367e+07 50.1164 0.00611468 0.993678 0 49.9495 GTEX-U3ZM-0626-SM-4DXTV 0 B1 6 pieces ~9x4mm 7.8 Esophagus Esophagus - Muscularis 0004648 220 756 BP-25571 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989217 271243 0.975228 0.99164 0.829562 20931 1 76 0.00211735 140 0 6.07161e+07 0.0244976 565767 6.1228e+07 5.44664e+06 20949 3.02178e+07 0 0.145666 0.99164 0.822627 6.07161e+07 0.00296256 1.30971e+07 5.17327e+06 1.31221e+07 144 1.3123e+07 1.05401e+07 0.00253892 1.32345e+07 50.2115 0.00924033 0.994063 0 50.0477 GTEX-U3ZM-0826-SM-4DXU6 2 B1 6 pieces ~10x4mm. Urothelium variably sloughed, better preserved than usual, less than 1% of thickness 7.5 Bladder Bladder 0001255 230 747 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988668 339167 0.975561 0.991069 0.843516 21262 1 76 0.00209364 139 0 6.39267e+07 0.0241488 738605 6.45027e+07 5.83947e+06 21277 3.17929e+07 0 0.132045 0.991069 0.835983 6.39267e+07 0.00297382 1.3807e+07 5.68086e+06 1.38368e+07 159 1.38104e+07 1.10694e+07 0.00253266 1.39797e+07 50.3047 0.0114508 0.99347 0 50.0538 GTEX-U3ZM-0926-SM-4DXSW 1 B1 2 pieces ~9x7mm. Note: ~1.5mm focus of seminal vesicle in one. Glands well -preserved 7.5 Prostate Prostate 0002367 231 746 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985539 434181 0.963419 0.988853 0.762188 24367 1 76 0.00226275 153 0 7.41288e+07 0.0363092 532884 7.49644e+07 6.52746e+06 24397 3.68314e+07 0 0.201231 0.988853 0.753692 7.41288e+07 0.00314959 1.63063e+07 9.44515e+06 1.63708e+07 174 1.64076e+07 1.04441e+07 0.00270469 1.65054e+07 50.1485 0.0071085 0.992168 0 50.0986 GTEX-U3ZM-1026-SM-EZ6LD 1 B1 2 pieces ~9x8mm 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 234 744 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985672 154619 0.97778 0.987025 0.830628 22083 1 76 0.00235496 208 0 8.05637e+07 0.0219296 1.29221e+06 8.16228e+07 6.28839e+06 22103 4.01397e+07 0 0.147152 0.987025 0.819851 8.05637e+07 0.00344358 1.77881e+07 7.56522e+06 1.79509e+07 250 1.7904e+07 1.23363e+07 0.00289853 1.79307e+07 50.0373 0.0158315 0.988378 0 50.2279 GTEX-U3ZM-1126-SM-4DXUB 1 B1 6 pieces ~7x2mm. Mucosa is ~10% thickness, fairly well-preserved. 6.7 Colon Colon - Transverse 0001157 237 741 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.974244 352561 0.9705 0.97797 0.811824 22752 1 76 0.00247324 152 0 6.49658e+07 0.0292104 1.76586e+06 6.64292e+07 6.18655e+06 22773 3.22485e+07 0 0.158676 0.97797 0.793939 6.49658e+07 0.00336686 1.43721e+07 9.45427e+06 1.43773e+07 176 1.43667e+07 8.02304e+06 0.00291835 1.46011e+07 50.4046 0.0265826 0.981696 0 50.0089 GTEX-U3ZM-1226-SM-3DB9G 1 B1 2 pieces ~8x7mm, minimal interstitial fat 8.4 Muscle Muscle - Skeletal 0011907 239 740 BP-25562 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.7407 228577 0.982186 0.739391 0.884683 19423 1 76 0.0019418 177 0 7.7678e+07 0.017515 560389 1.05057e+08 9.7774e+06 19429 3.8489e+07 0 0.0975037 0.739391 0.654126 7.7678e+07 0.00383217 1.6741e+07 9.38952e+06 1.71407e+07 189 1.70368e+07 1.69254e+07 0.00288866 1.67134e+07 49.5209 0.00533416 0.738082 0 50.5898 GTEX-U3ZM-1526-SM-3DB9D 0 B1 6 pieces, ~7x3mm. Squamous epithelium is ~2-3% of thickness 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 249 731 BP-25562 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.831988 114533 0.968674 0.833525 0.788345 22997 1 76 0.00229872 127 0 5.53151e+07 0.03113 661843 6.63629e+07 7.31473e+06 23017 2.74214e+07 0 0.18033 0.833525 0.657105 5.53151e+07 0.00441523 1.20766e+07 6.61052e+06 1.22826e+07 135 1.2274e+07 7.99054e+06 0.00335502 1.21759e+07 49.7993 0.00997309 0.835061 0 50.4228 GTEX-U3ZM-1626-SM-4DXSK 1 B1 2 pieces ~10x9mm. 6.9 Testis Testis 0000473 250 731 BP-25562 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987351 724180 0.911637 0.990301 0.712458 31533 1 76 0.00228664 131 0 6.4234e+07 0.0880788 885484 6.48631e+07 5.66553e+06 31585 3.19367e+07 0 0.199178 0.990301 0.705548 6.4234e+07 0.00306534 1.31757e+07 2.24271e+07 1.32699e+07 132 1.3343e+07 9.72085e+06 0.00267483 1.3286e+07 49.893 0.0136516 0.993252 0 50.1781 GTEX-U3ZN-0001-SM-3G3SR B1 Blood Whole Blood 0013756 -100 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840002_R03C01 GTEX-U3ZN-0001-SM-3G3TS B1 Blood Whole Blood 0013756 -100 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R01C02 GTEX-U3ZN-0001-SM-3UZF1 B1 Blood Whole Blood 0013756 -100 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-U3ZN-0001-SM-5URBO B1 Blood Whole Blood 0013756 -100 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-5270,LCSET-5436 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U3ZN-0002-SM-3NMDF B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -100 BP-31388 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991535 1.0049e+06 0.961625 0.993647 0.773479 23441 1 76 0.00272753 290 0 1.17639e+08 0.0377359 905204 1.18391e+08 1.3661e+07 23490 5.85283e+07 0 0.188145 0.993647 0.768565 1.17639e+08 0.00392069 2.58777e+07 2.00842e+07 2.59346e+07 281 2.60052e+07 2.6603e+07 0.00332284 2.6052e+07 50.045 0.00764589 0.995758 0 50.0549 GTEX-U3ZN-0006-SM-3DB7Y B1 8.6 Blood Whole Blood 0013756 -100 BP-24229 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.51851 273168 0.967979 0.522991 0.806644 19653 1 76 0.00247955 102 0 6.11248e+07 0.031325 262340 1.16875e+08 1.70602e+07 19658 3.00927e+07 0 0.161335 0.522991 0.421868 6.11248e+07 0.0104284 1.36972e+07 5.6364e+07 1.39598e+07 112 1.41743e+07 1.40977e+07 0.00641993 1.40062e+07 49.7018 0.00224461 0.527472 0 50.4747 GTEX-U3ZN-0008-SM-4DXTL B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 175 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989838 542870 0.972904 0.99247 0.828616 21134 1 76 0.00201686 179 0 7.52132e+07 0.0267344 201912 7.57838e+07 7.07414e+06 21151 3.74244e+07 0 0.144288 0.99247 0.822376 7.52132e+07 0.00264225 1.67329e+07 1.0276e+07 1.67387e+07 170 1.68437e+07 1.65085e+07 0.00232872 1.68196e+07 49.9642 0.00266432 0.995103 0 50.0086 GTEX-U3ZN-0126-SM-4DXUM 1 B1 2 pieces, 9x5 & 8x6 mm; not overly congested 6.8 Spleen Spleen 0002106 110 1007 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986505 427385 0.966973 0.989603 0.806242 23375 1 76 0.00257461 157 0 7.31723e+07 0.0318167 510214 7.39411e+07 6.97671e+06 23398 3.63231e+07 0 0.160731 0.989603 0.79786 7.31723e+07 0.0034529 1.61735e+07 1.18778e+07 1.62094e+07 174 1.62755e+07 1.16668e+07 0.00301238 1.63286e+07 50.0814 0.00690028 0.992701 0 50.0554 GTEX-U3ZN-0226-SM-3DB8D 1 B1 2 pieces, 9x7 & 8x7 mm; moderate macrovesicular steatosis; no fibrosis 9.1 Liver Liver 0001114 114 1004 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.847064 411253 0.981513 0.852807 0.861613 22424 1 76 0.00192031 269 0 1.15849e+08 0.0178393 725967 1.35845e+08 1.57874e+07 22443 5.73113e+07 0 0.1199 0.852807 0.73479 1.15849e+08 0.00817731 2.53036e+07 1.57148e+07 2.54706e+07 293 2.57159e+07 2.65822e+07 0.00502774 2.57788e+07 50.0611 0.00534409 0.858551 0 50.1644 GTEX-U3ZN-0326-SM-3DB86 1 B1 2 pieces 10x5 & 8x4 mm; 2.5x1.7 mm fibrosed projection on smaller piece 7.2 Thyroid Thyroid 0002046 117 1002 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.872997 459588 0.963781 0.876935 0.705994 26078 1 76 0.0024204 227 0 1.2838e+08 0.035954 323924 1.46397e+08 1.72295e+07 26149 6.35851e+07 0 0.257786 0.876935 0.619111 1.2838e+08 0.00908627 2.78865e+07 1.17815e+07 2.81366e+07 271 2.81974e+07 1.78137e+07 0.00573837 2.83602e+07 50.1439 0.00221265 0.880873 0 50.2233 GTEX-U3ZN-0426-SM-4DXSH 0 B1 2 pieces, 2.8 & 2.9 mm arteries with up to 1 mm surrounding adipose 8 Blood Vessel Artery - Coronary 0001621 117 1003 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988004 352177 0.972545 0.99128 0.82814 22157 1 76 0.00214551 135 0 6.49313e+07 0.0270846 273100 6.55025e+07 6.18382e+06 22176 3.22691e+07 0 0.144405 0.99128 0.820918 6.49313e+07 0.00298653 1.40547e+07 5.3328e+06 1.40867e+07 150 1.41356e+07 1.22976e+07 0.00256463 1.42096e+07 50.1306 0.00416931 0.994556 0 50.0568 GTEX-U3ZN-0526-SM-4DXTH 1 B1 6 pieces up to 10x1.5 mm; no plaques; good architecture 7.8 Blood Vessel Artery - Aorta 0001496 120 1000 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985924 381478 0.975041 0.989482 0.847842 22421 1 76 0.00207849 140 0 7.00334e+07 0.0245327 210976 7.07778e+07 6.35784e+06 22438 3.4796e+07 0 0.127199 0.989482 0.838924 7.00334e+07 0.00294368 1.52378e+07 6.11335e+06 1.5203e+07 165 1.5279e+07 1.36629e+07 0.00250953 1.54032e+07 50.2024 0.00298082 0.99304 0 49.9429 GTEX-U3ZN-0626-SM-3DB7U 1 B1 2 pieces 10x8 & 9x8 mm; panacinar emphysema; 2x1.6 mm pleural adipose focus (pleural tissue should be avoided) 9.2 Lung Lung 0008952 121 1000 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.980458 862467 0.975076 0.98455 0.802684 27498 1 76 0.00238615 523 0 1.91137e+08 0.0245078 828216 1.94137e+08 1.84657e+07 27560 9.48749e+07 0 0.172391 0.98455 0.790283 1.91137e+08 0.00862693 4.21356e+07 1.79344e+07 4.30901e+07 522 4.31056e+07 3.38563e+07 0.00549357 4.28698e+07 49.8629 0.00426615 0.988642 0 50.56 GTEX-U3ZN-0726-SM-4DXT5 1 B1 2 pieces 11x9 & 9x8 mm; endometrium (0.9 mm thick) on larger one; none on the other 8.8 Uterus Uterus 0000995 123 999 BP-25490 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988771 417238 0.970454 0.991747 0.813522 22090 1 76 0.00207427 126 0 5.70018e+07 0.0291929 139698 5.74762e+07 5.06821e+06 22106 2.83401e+07 0 0.156932 0.991747 0.806808 5.70018e+07 0.0029088 1.24808e+07 5.75516e+06 1.25122e+07 132 1.25554e+07 1.05679e+07 0.00249028 1.2604e+07 50.0965 0.00243054 0.994723 0 50.0628 GTEX-U3ZN-0826-SM-4DXSZ 0 B1 2 pieces 7x7 & 10x8 mm; cortex and medulla; one with ~40% peripheral adipose and other with ~20% adipose 9.2 Adrenal Gland Adrenal Gland 0002369 124 998 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988988 470265 0.97531 0.992465 0.827616 23234 1 76 0.00204976 201 0 8.05153e+07 0.0243439 786102 8.11265e+07 7.34003e+06 23267 4.00185e+07 0 0.147694 0.992465 0.82138 8.05153e+07 0.00287661 1.78038e+07 8.44283e+06 1.78271e+07 211 1.79335e+07 1.44692e+07 0.00246174 1.79551e+07 50.0301 0.00968982 0.995943 0 50.0328 GTEX-U3ZN-0926-SM-4DXTU 0 B1 6 pieces up to 8x4 mm; well preserved 8.2 Vagina Vagina 0000996 125 998 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988679 482892 0.973349 0.991698 0.787343 22609 1 76 0.0022361 135 0 6.53621e+07 0.0264237 176573 6.59093e+07 6.04324e+06 22634 3.24934e+07 0 0.186006 0.991698 0.780807 6.53621e+07 0.00300674 1.46e+07 9.14842e+06 1.4613e+07 144 1.46901e+07 1.19399e+07 0.00262025 1.47161e+07 50.0443 0.00267903 0.994717 0 50.0223 GTEX-U3ZN-1026-SM-4DXTC 0 B1 2 pieces, 10x7 & 8x7 mm; ova seen; peritoneal surface present 7.9 Ovary Ovary 0000992 129 995 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986905 627594 0.968088 0.990217 0.760974 23207 1 76 0.00219402 140 0 6.98951e+07 0.0316469 155436 7.05856e+07 6.75325e+06 23245 3.47201e+07 0 0.207115 0.990217 0.753529 6.98951e+07 0.00294025 1.53798e+07 7.95449e+06 1.53836e+07 147 1.54731e+07 1.29106e+07 0.00256588 1.55177e+07 50.072 0.00220209 0.993529 0 50.0062 GTEX-U3ZN-1126-SM-4DXUL 0 B1 2 pieces 9x4 & 6x5 mm;; very good fimbriated specimens; one has ~60% vascularized fibroadipose stroma at one end; other has <10% surrounding stroma 7 Fallopian Tube Fallopian Tube 0003889 131 994 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986895 516449 0.945975 0.990169 0.695 25343 1 76 0.00234855 131 0 7.01884e+07 0.0537958 325117 7.08853e+07 6.5183e+06 25387 3.48674e+07 0 0.250975 0.990169 0.688168 7.01884e+07 0.00322485 1.5037e+07 8.42631e+06 1.50809e+07 143 1.51427e+07 9.9957e+06 0.00278525 1.51924e+07 50.082 0.00458652 0.993443 0 50.0728 GTEX-U3ZN-1226-SM-4DXUD 1 B1 6 pieces up to 8x5mm; 3 have good mucosa, 3 have no mucosa, but outer muscle and abundant adipose (up to 5x5 mm) 8.8 Bladder Bladder 0001255 132 993 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986464 434169 0.969186 0.989962 0.764886 23662 1 76 0.00235699 118 0 5.57454e+07 0.030087 230802 5.63107e+07 4.90165e+06 23686 2.76791e+07 0 0.2043 0.989962 0.757208 5.57454e+07 0.00325429 1.23322e+07 5.31111e+06 1.23489e+07 123 1.24248e+07 9.25436e+06 0.00280405 1.24432e+07 50.0369 0.00409873 0.99346 0 50.0338 GTEX-U3ZN-1426-SM-3DB87 0 B1 2 pieces 9x7 & 7x6 mm; good clean specimen; papillary muscles with endothelium 9 Heart Heart - Left Ventricle 0006566 138 988 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.98086 1.64844e+06 0.979625 0.985602 0.838504 24764 1 76 0.00217476 519 0 2.08048e+08 0.0201084 6.00141e+06 2.11087e+08 2.14929e+07 24814 1.03161e+08 0 0.141121 0.985602 0.826432 2.08048e+08 0.00850551 4.58203e+07 2.14757e+07 4.58551e+07 539 4.58878e+07 3.62443e+07 0.0053249 4.66643e+07 50.4195 0.028431 0.990344 0 50.019 GTEX-U3ZN-1626-SM-4DXTZ 0 B1 2 pieces 9x6 & 11x8 mm; well preserved 9.2 Cervix Uteri Cervix - Ectocervix 0012249 145 983 BP-25493 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988209 520180 0.973118 0.9912 0.768722 22254 1 76 0.00230976 141 0 7.00951e+07 0.0266465 242890 7.07174e+07 6.31077e+06 22275 3.48489e+07 0 0.204396 0.9912 0.761958 7.00951e+07 0.00322092 1.57371e+07 1.22081e+07 1.57499e+07 149 1.58423e+07 1.26758e+07 0.00276396 1.58508e+07 50.0133 0.00343466 0.994192 0 50.0203 GTEX-U3ZN-1726-SM-4DXUQ 0 B1 6 pieces up to 4x1 mm; thickened mucosa with epithelium up to 0.5 mm; well preserved 9.8 Esophagus Esophagus - Mucosa 0006920 149 979 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.987297 489299 0.975376 0.990675 0.814329 22313 1 76 0.00224672 151 0 7.3204e+07 0.0243063 335119 7.38931e+07 7.12824e+06 22336 3.6379e+07 0 0.161047 0.990675 0.806735 7.3204e+07 0.00317196 1.64919e+07 1.02695e+07 1.64943e+07 161 1.66049e+07 1.45001e+07 0.00270776 1.66193e+07 50.0217 0.00453519 0.994053 0 50.0038 GTEX-U3ZN-1826-SM-4DXUY 0 B1 6 pieces up to 6x3 mm; 9 Esophagus Esophagus - Muscularis 0004648 150 979 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.989105 418522 0.975865 0.991988 0.841575 20919 1 76 0.0020686 126 0 5.51666e+07 0.0238485 313318 5.56122e+07 5.03677e+06 20927 2.74292e+07 0 0.134289 0.991988 0.834833 5.51666e+07 0.00296475 1.18806e+07 4.10491e+06 1.18761e+07 128 1.1887e+07 1.06815e+07 0.00251537 1.20204e+07 50.279 0.00563398 0.994871 0 49.9906 GTEX-U3ZN-1926-SM-4DXSG 0 B1 2 pieces 13x9 & 12x11 mm; latter with ~80% adipose (with large central defect); ducts and lobular units present 7.5 Breast Breast - Mammary Tissue 0008367 149 981 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.984776 382957 0.966011 0.98784 0.752323 24135 1 76 0.00225295 130 0 5.99415e+07 0.0336092 304034 6.06794e+07 5.27014e+06 24161 2.97774e+07 0 0.213688 0.98784 0.743175 5.99415e+07 0.00308985 1.31292e+07 5.98803e+06 1.31722e+07 134 1.32231e+07 9.61802e+06 0.0026701 1.32576e+07 50.065 0.0050105 0.990904 0 50.0818 GTEX-U3ZN-2026-SM-4DXUC 1 B1 6 pieces up to 7x3 mm; good mucosal preservation; 4 of 6 have muscularis 7.1 Stomach Stomach 0000945 150 980 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.979643 314336 0.980109 0.983069 0.828907 22437 1 76 0.00216388 302 0 7.30313e+07 0.0192384 574050 7.42891e+07 6.86732e+06 22455 3.62592e+07 0 0.151202 0.983069 0.814873 7.30313e+07 0.00307155 1.68178e+07 8.60715e+07 1.7005e+07 214 1.7089e+07 1.88845e+07 0.00261613 1.69686e+07 49.8231 0.00772724 0.986494 0 50.2767 GTEX-U3ZN-2126-SM-4DXU1 1 B1 6 pieces up to 8x3 mm; good mucosal preservation; 8 Colon Colon - Transverse 0001157 155 976 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985518 500094 0.971223 0.989165 0.800713 23602 1 76 0.00252748 162 0 7.32268e+07 0.0272324 988668 7.40289e+07 6.80548e+06 23630 3.63105e+07 0 0.170511 0.989165 0.792037 7.32268e+07 0.00346699 1.63473e+07 8.21903e+06 1.63504e+07 180 1.64314e+07 1.11962e+07 0.00299551 1.65181e+07 50.1315 0.0133552 0.992813 0 50.0047 GTEX-U3ZN-2226-SM-3DB88 0 B1 2 pieces 9x7 & 8x5 mm; 5x2 mm adipose projection extends from one piece 8.5 Muscle Muscle - Skeletal 0011907 175 956 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.967013 398414 0.980927 0.970515 0.852297 23531 1 76 0.00211079 524 0 1.78984e+08 0.0188292 2.90176e+06 1.84422e+08 2.00001e+07 23565 8.89484e+07 0 0.12863 0.970515 0.827167 1.78984e+08 0.00837416 3.81217e+07 1.92145e+07 3.89985e+07 464 3.88391e+07 3.32137e+07 0.00523117 3.88311e+07 49.9948 0.0157344 0.974017 0 50.5684 GTEX-U3ZN-2326-SM-3DB7W 0 B1 6 pieces up to 7x3 mm; up to 1.5 mm subcutaneous adipose in 3 pieces 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 176 956 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.961881 538946 0.962837 0.967655 0.739219 26658 1 76 0.00261144 292 0 1.31484e+08 0.0369468 688256 1.35879e+08 1.62309e+07 26709 6.51093e+07 0 0.223618 0.967655 0.715309 1.31484e+08 0.00975059 2.82835e+07 1.47066e+07 2.8748e+07 320 2.88186e+07 1.71675e+07 0.00615972 2.89407e+07 50.1057 0.0050652 0.97343 0 50.4072 GTEX-U3ZN-2526-SM-3DB7V 0 B1 2 pieces 1x2 & 3x2mm with 1x1.5 mm arteries and large amounts of adipose (~50% in the larger and ~40% in the other); large vein also in smaller piece 8.2 Blood Vessel Artery - Tibial 0007610 177 956 BP-25495 RNA isolation_PAXgene Tissue miRNA 05/18/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.862906 318160 0.974412 0.867928 0.825958 25419 1 76 0.00229499 387 0 1.51378e+08 0.0251982 748627 1.74413e+08 1.9602e+07 25458 7.49927e+07 0 0.148454 0.867928 0.716872 1.51378e+08 0.00916848 3.25172e+07 1.40298e+07 3.32708e+07 416 3.34926e+07 2.76165e+07 0.00571185 3.31057e+07 49.7096 0.00429227 0.87295 0 50.5727 GTEX-U3ZN-2626-SM-3DB7T 1 B1 2 pieces 15x5 & 14x4mm; minimal artifacts 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 183 950 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1897 09/11/2012 TruSeq.v1 RNASEQ 0.759459 363866 0.973026 0.762332 0.797127 25000 1 76 0.00229572 522 0 1.50216e+08 0.0266133 1.28255e+06 1.97048e+08 2.41513e+07 25049 7.44513e+07 0 0.175899 0.762332 0.607675 1.50216e+08 0.00877659 3.28856e+07 1.52041e+07 3.31833e+07 510 3.31724e+07 2.22716e+07 0.00552394 3.3436e+07 50.1979 0.00650879 0.765205 0 50.2253 GTEX-U412-0001-SM-3G3S1 C1 Blood Whole Blood 0013756 1251 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003099_R01C01 GTEX-U412-0001-SM-3G3T2 C1 Blood Whole Blood 0013756 1251 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R05C01 GTEX-U412-0001-SM-4X627 C1 Blood Whole Blood 0013756 1251 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-U412-0001-SM-5SOEO C1 Blood Whole Blood 0013756 1251 BP-24272 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/17/2012 LCSET-5226 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U412-0006-SM-3DB8J C1 7.8 Blood Whole Blood 0013756 1251 BP-24229 RNA isolation_PAXgene Blood RNA (Manual) 04/17/2012 LCSET-1898 09/11/2012 TruSeq.v1 EXCLUDE 0.967296 275647 0.974718 0.968443 0.76346 17779 1 76 0.00264969 100 0 6.96865e+07 0.0246101 92429 7.19572e+07 5.89713e+06 17792 3.46565e+07 0 0.211258 0.968443 0.739368 6.96865e+07 0.0041638 1.57374e+07 8.63256e+07 1.62189e+07 113 1.61691e+07 1.57251e+07 0.00340585 1.58673e+07 49.529 0.0012845 0.96959 0 50.7534 GTEX-U412-0008-SM-4DXTE C1 9.1 Skin Cells - Cultured fibroblasts EFO_0002009 1360 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.99162 446998 0.974273 0.993794 0.84027 20670 1 76 0.002191 155 0 6.7809e+07 0.0252851 134502 6.82325e+07 6.07479e+06 20688 3.37499e+07 0 0.134004 0.993794 0.835055 6.7809e+07 0.00283339 1.51062e+07 8.37263e+06 1.51269e+07 146 1.52125e+07 1.53729e+07 0.00251149 1.51631e+07 49.9188 0.00197123 0.995967 0 50.0343 GTEX-U412-0126-SM-EVR2X 1 C1 2 pieces, good clean specimens ~4mm d. 5.5 Nerve Nerve - Tibial 0001323 1344 1394 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.984957 227774 0.957427 0.986809 0.684583 25316 1 76 0.0026535 222 0 9.60273e+07 0.0423319 310325 9.73109e+07 7.86585e+06 25377 4.77693e+07 0 0.272844 0.986809 0.675552 9.60273e+07 0.00392815 2.0867e+07 9.00503e+06 2.10448e+07 220 2.09819e+07 1.13816e+07 0.00328962 2.10938e+07 50.1329 0.003189 0.98866 0 50.2121 GTEX-U412-0226-SM-3NMC8 1 C1 2 pieces, both with severely caclified partially occlusive atherosclerosis, encircled 2.5mm d. 7.4 Blood Vessel Artery - Tibial 0007610 1346 1393 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.968215 462096 0.959792 0.970642 0.820359 22362 1 76 0.00347273 208 0 8.66557e+07 0.0398737 278408 8.92768e+07 1.1516e+07 22389 4.30556e+07 0 0.139432 0.970642 0.796275 8.66557e+07 0.00483058 1.8338e+07 2.08023e+07 1.84683e+07 211 1.84545e+07 1.57946e+07 0.00414996 1.85571e+07 50.1386 0.00311848 0.973069 0 50.1771 GTEX-U412-0326-SM-3DB9L 1 C1 2 pieces ~8x5mm, minimal interstitial fat; one with ~10% adherent fat 7.8 Muscle Muscle - Skeletal 0011907 1349 1391 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.948592 209423 0.981668 0.94959 0.858797 20373 1 76 0.00258248 199 0 8.89609e+07 0.0181097 838388 9.36836e+07 7.77079e+06 20390 4.42778e+07 0 0.122871 0.94959 0.815505 8.89609e+07 0.00405171 1.91479e+07 1.08112e+07 1.9639e+07 229 1.95342e+07 1.72616e+07 0.00331632 1.93244e+07 49.7301 0.00894915 0.950587 0 50.633 GTEX-U412-0326-SM-5BC7E 1 C1 2 pieces ~8x5mm, minimal interstitial fat; one with ~10% adherent fat 7.8 Muscle Muscle - Skeletal 0011907 1349 1391 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-4455 01/18/2014 TruSeq.v1 EXCLUDE 0.988448 244525 0.981677 0.992652 0.855874 19918 1 76 0.00304543 127 0 6.92374e+07 0.0181181 728517 6.97499e+07 1.94053e+07 19928 3.44051e+07 0 0.125803 0.992652 0.849586 6.92374e+07 0.00531768 1.49817e+07 9.90216e+06 1.49878e+07 149 1.49937e+07 1.29563e+07 0.00417674 1.52367e+07 50.402 0.0104447 0.996857 0 50.0102 GTEX-U412-0326-SM-5DUVP 1 C1 2 pieces ~8x5mm, minimal interstitial fat; one with ~10% adherent fat 7.8 Muscle Muscle - Skeletal 0011907 1349 1391 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.987421 236833 0.982858 0.990822 0.86266 19590 1 76 0.00225606 126 0 6.76831e+07 0.0169458 656666 6.831e+07 5.92237e+06 19599 3.36566e+07 0 0.120198 0.990822 0.854743 6.76831e+07 0.0034096 1.47208e+07 9.1208e+06 1.47625e+07 152 1.47195e+07 1.30634e+07 0.00283085 1.49678e+07 50.4181 0.00961303 0.994224 0 50.0706 GTEX-U412-0426-SM-3DB9O 1 C1 6 pieces ~6x1.5mm Squamous epithelium is ~2-3% thickness 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 1359 1381 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.952092 656639 0.947719 0.953074 0.778754 22536 1 76 0.00276501 172 0 7.05359e+07 0.0519979 432211 7.40088e+07 6.345e+06 22563 3.50584e+07 0 0.168965 0.953074 0.74221 7.05359e+07 0.00425608 1.48953e+07 2.90189e+07 1.51406e+07 161 1.51377e+07 1.10222e+07 0.00350977 1.49753e+07 49.7303 0.00583999 0.954056 0 50.4083 GTEX-U412-0526-SM-3DB9I 1 C1 2 pieces ~8x7mm 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 1362 1379 BP-25560 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.662719 689560 0.938984 0.660608 0.790434 20760 1 76 0.00275842 126 0 5.61604e+07 0.0606419 592716 8.50131e+07 8.18741e+06 20771 2.77874e+07 0 0.148549 0.660608 0.522167 5.61604e+07 0.00470286 1.19111e+07 3.13214e+07 1.21534e+07 134 1.20462e+07 8.19074e+06 0.00373375 1.18563e+07 49.6028 0.00697205 0.658497 0 50.5035 GTEX-U412-0726-SM-EVR2Y 3 C1 2pieces ~8x6mm, unusually badly autolyzed 5.5 Thyroid Thyroid 0002046 1368 1376 BP-25562 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.980257 213271 0.973038 0.982133 0.824562 23179 1 76 0.00228452 203 0 8.70663e+07 0.0265679 359651 8.86502e+07 6.31137e+06 23204 4.33078e+07 0 0.148476 0.982133 0.809829 8.70663e+07 0.00386364 1.90307e+07 9.76314e+06 1.92451e+07 206 1.91958e+07 1.70861e+07 0.00307257 1.92431e+07 50.0615 0.00405697 0.984009 0 50.2801 GTEX-U412-0826-SM-3DB9K 3 C1 2 pieces severe probable congestion but severly autolyzed tissue hampers interpretation, ~7x5mm 6 Lung Lung 0008952 1370 1374 BP-25562 RNA isolation_PAXgene Tissue miRNA 05/22/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.958346 170344 0.971287 0.959047 0.770182 23541 1 76 0.00284262 140 0 7.42088e+07 0.0282464 368875 7.73777e+07 7.33836e+06 23578 3.68563e+07 0 0.201105 0.959047 0.73864 7.42088e+07 0.00405528 1.62962e+07 1.10061e+07 1.64787e+07 164 1.64882e+07 1.17414e+07 0.00344851 1.63378e+07 49.771 0.0047672 0.959747 0 50.2784 GTEX-U412-1726-SM-EZ6KX 3 C1 6 pieces, mucosa badly autolyzed ~7x2mm, 5.7 Colon Colon - Transverse 0001157 1391 1360 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986183 165087 0.97122 0.987401 0.82912 23648 1 76 0.00260556 280 0 1.07746e+08 0.0284981 1.3535e+06 1.09121e+08 8.02675e+06 23675 5.37019e+07 0 0.1421 0.987401 0.818673 1.07746e+08 0.00350658 2.31992e+07 9.1588e+06 2.32451e+07 285 2.31975e+07 1.86525e+07 0.00305552 2.33713e+07 50.1866 0.0124037 0.988618 0 50.0494 GTEX-U412-1826-SM-4DXTJ 2 C1 2 pieces, one iwth trace focal ductal epithelium, encircled 7.9 Breast Breast - Mammary Tissue 0008367 1393 1358 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206,LCSET-3797 08/31/2013 TruSeq.v1 RNASEQ 0.987764 405824 0.971519 0.990224 0.751821 22526 1 76 0.0024464 131 0 6.05402e+07 0.0282236 367489 6.11379e+07 4.3794e+06 22560 3.00946e+07 0 0.219697 0.990224 0.744472 6.05402e+07 0.00312156 1.33812e+07 6.11972e+06 1.33905e+07 139 1.3436e+07 9.02372e+06 0.00278314 1.34784e+07 50.0788 0.00601083 0.992685 0 50.0173 GTEX-U412-2026-SM-4DXSI 2 C1 2 pieces, one aliqout is all stroma. ~7x6mm 6.2 Prostate Prostate 0002367 1397 1355 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.983112 359048 0.959332 0.985544 0.734716 24124 1 76 0.0026668 135 0 6.83661e+07 0.0404339 805989 6.93689e+07 6.09869e+06 24159 3.39865e+07 0 0.224616 0.985544 0.724094 6.83661e+07 0.00349191 1.49744e+07 9.36723e+06 1.50476e+07 150 1.50771e+07 9.44381e+06 0.00307834 1.51111e+07 50.0562 0.0116189 0.987975 0 50.1219 GTEX-U4B1-0001-SM-3G3SS B1 Blood Whole Blood 0013756 -167 BP-24314 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003060_R03C01 GTEX-U4B1-0001-SM-3G3TT B1 Blood Whole Blood 0013756 -167 BP-24314 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R03C01 GTEX-U4B1-0001-SM-3USQC B1 Blood Whole Blood 0013756 -167 BP-24314 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-U4B1-0001-SM-5URC2 B1 Blood Whole Blood 0013756 -167 BP-24314 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/18/2012 LCSET-5270,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U4B1-0006-SM-3DB8E B1 8.9 Blood Whole Blood 0013756 -167 BP-24412 RNA isolation_PAXgene Blood RNA (Manual) 04/20/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.847142 562153 0.959717 0.84699 0.812311 19641 1 76 0.00240643 132 0 7.31727e+07 0.0399091 256357 8.63914e+07 7.69161e+06 19656 3.6353e+07 0 0.147406 0.84699 0.688019 7.31727e+07 0.0040245 1.59749e+07 2.68555e+07 1.62287e+07 151 1.62166e+07 1.50661e+07 0.00321561 1.59762e+07 49.6266 0.00296739 0.846839 0 50.3941 GTEX-U4B1-0008-SM-4DXUW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988079 572084 0.972957 0.99169 0.839966 20938 1 76 0.00204501 156 0 6.7007e+07 0.0266643 183059 6.75685e+07 6.3567e+06 20955 3.32992e+07 0 0.132991 0.99169 0.832986 6.7007e+07 0.00274324 1.48846e+07 9.57878e+06 1.48983e+07 145 1.50245e+07 1.54574e+07 0.00239286 1.49951e+07 49.9509 0.00270924 0.995301 0 50.0231 GTEX-U4B1-0126-SM-4DXSN 1 B1 2 pieces, 6x14 & 6x9 mm; largely cortex; 1 piece has 9.4 Adrenal Gland Adrenal Gland 0002369 103 1313 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988985 522629 0.975875 0.991909 0.843402 22071 1 76 0.0023457 149 0 7.01262e+07 0.0237349 928115 7.06982e+07 6.48069e+06 22089 3.48602e+07 0 0.132473 0.991909 0.836578 7.01262e+07 0.00316602 1.5462e+07 6.96818e+06 1.55017e+07 167 1.55581e+07 1.24192e+07 0.00275465 1.55989e+07 50.0655 0.0131278 0.994834 0 50.0642 GTEX-U4B1-0226-SM-4DXU8 0 B1 2 pieces, 3x2 & 2.8x2.5 mm; eccentric atheromatous plaque; both arteries encased in up to 1 mm adipose 8.3 Blood Vessel Artery - Coronary 0001621 114 1302 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.986001 372652 0.975164 0.990046 0.838916 21530 1 76 0.00225404 123 0 5.90948e+07 0.0243151 242488 5.96889e+07 5.60192e+06 21543 2.93392e+07 0 0.136248 0.990046 0.830566 5.90948e+07 0.00325421 1.27764e+07 4.78471e+06 1.28092e+07 138 1.2865e+07 1.14181e+07 0.00275209 1.29499e+07 50.1645 0.00406253 0.994091 0 50.0642 GTEX-U4B1-0326-SM-3DB8K 1 B1 2 pieces, 9x9 & 7x8 mm 8.7 Heart Heart - Left Ventricle 0006566 118 1298 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.981331 289777 0.984002 0.982057 0.87441 21073 1 76 0.00229852 269 0 1.10401e+08 0.0157252 3.7754e+06 1.12418e+08 7.91045e+06 21087 5.49938e+07 0 0.109592 0.982057 0.85872 1.10401e+08 0.00339891 2.42482e+07 1.99583e+07 2.48843e+07 305 2.47297e+07 1.89381e+07 0.00284831 2.44527e+07 49.7184 0.0335835 0.982783 0 50.6474 GTEX-U4B1-0526-SM-4DXTK 1 B1 2 pieces, 6x7 & 8x9 mm; not congested 6.5 Spleen Spleen 0002106 125 1291 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.983964 461936 0.959451 0.986501 0.803465 22815 1 76 0.00280819 135 0 6.52352e+07 0.0395691 280863 6.61278e+07 6.23192e+06 22842 3.24116e+07 0 0.155986 0.986501 0.792619 6.52352e+07 0.00357537 1.42708e+07 1.32268e+07 1.4307e+07 151 1.43494e+07 1.06104e+07 0.00319079 1.43958e+07 50.0808 0.00424728 0.989039 0 50.0634 GTEX-U4B1-0626-SM-3DB8L 1 B1 2 pieces, 10.5x8 & 13x7 mm 7.5 Thyroid Thyroid 0002046 133 1283 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.97291 209888 0.963026 0.97361 0.727517 24484 1 76 0.00229566 207 0 9.37504e+07 0.0366878 299138 9.62915e+07 7.20531e+06 24542 4.6647e+07 0 0.235509 0.97361 0.708318 9.37504e+07 0.00360749 2.04115e+07 9.50268e+06 2.05843e+07 221 2.05795e+07 1.43285e+07 0.0029511 2.04794e+07 49.8781 0.00310659 0.974311 0 50.2108 GTEX-U4B1-0726-SM-4DXUA 2 B1 2 pieces, 10.7x 7.6 & 12x7 mm; very little extraneous adipose 8.3 Pancreas Pancreas 0001150 142 1274 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.976047 366100 0.975036 0.979756 0.842401 20883 1 76 0.00243276 110 0 5.96122e+07 0.0247699 167434 6.08439e+07 5.59391e+06 20898 2.96067e+07 0 0.132635 0.979756 0.825347 5.96122e+07 0.00339762 1.37166e+07 1.21636e+07 1.3627e+07 111 1.37024e+07 1.64593e+07 0.00291336 1.38646e+07 50.2942 0.00275186 0.983465 0 49.8361 GTEX-U4B1-0826-SM-4DXTW 0 B1 6 pieces, up to 6.6x4 mm; well preserved mucosa 9.7 Esophagus Esophagus - Mucosa 0006920 163 1253 BP-25599 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988893 471526 0.972821 0.99139 0.828324 21063 1 76 0.00229472 132 0 6.13897e+07 0.0268852 289544 6.19228e+07 5.51892e+06 21078 3.05332e+07 0 0.144497 0.99139 0.821193 6.13897e+07 0.00312984 1.37569e+07 9.10041e+06 1.37404e+07 137 1.37975e+07 1.26025e+07 0.00271123 1.38502e+07 50.0953 0.00467588 0.993888 0 49.9701 GTEX-U4B1-0926-SM-4DXUV 0 B1 6 pieces, up to 11.3x3.5 mm; muscle with focal submucosa 8.6 Esophagus Esophagus - Muscularis 0004648 156 1260 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.984547 352408 0.976013 0.98751 0.832409 21058 1 76 0.00219606 153 0 6.68426e+07 0.0236396 555995 6.7688e+07 6.31365e+06 21079 3.32169e+07 0 0.143604 0.98751 0.822012 6.68426e+07 0.00310036 1.45095e+07 6.14823e+06 1.45305e+07 159 1.45636e+07 1.2022e+07 0.00264685 1.46691e+07 50.1805 0.00821409 0.990473 0 50.0361 GTEX-U4B1-1026-SM-4DXT1 1 B1 6 pieces, up to 11x1.4 mm; all mucosa & submucosa 7.6 Stomach Stomach 0000945 169 1247 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.984875 323364 0.976392 0.988409 0.841557 22411 1 76 0.00206338 223 0 6.8108e+07 0.023309 457475 6.89067e+07 6.34418e+06 22436 3.38356e+07 0 0.134835 0.988409 0.831802 6.8108e+07 0.00288186 1.53763e+07 3.79524e+07 1.55275e+07 169 1.56375e+07 1.71316e+07 0.00247116 1.55054e+07 49.7879 0.00663905 0.991943 0 50.2448 GTEX-U4B1-1126-SM-4DXV3 1 B1 6 pieces, up to 12x3 mm; good mucosa on all; hardly any muscularis 7.6 Colon Colon - Transverse 0001157 180 1236 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.98846 392930 0.973915 0.990707 0.820353 22914 1 76 0.00269841 177 0 7.80749e+07 0.0245643 859914 7.88073e+07 6.81898e+06 22941 3.87875e+07 0 0.153562 0.990707 0.812729 7.80749e+07 0.00337693 1.74323e+07 9.71288e+06 1.74197e+07 198 1.74638e+07 1.27539e+07 0.0030369 1.75477e+07 50.1198 0.0109116 0.992953 0 49.9819 GTEX-U4B1-1226-SM-4DXT7 1 B1 8 pieces, up to 10x3 mm; preserved mucosa on all 7.8 Bladder Bladder 0001255 191 1225 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988598 536713 0.973821 0.99128 0.821863 22592 1 76 0.0022457 157 0 7.37185e+07 0.02586 374650 7.4367e+07 6.56755e+06 22622 3.66462e+07 0 0.151958 0.99128 0.814696 7.37185e+07 0.00313601 1.59652e+07 6.50607e+06 1.59782e+07 169 1.60079e+07 1.35246e+07 0.00268965 1.61247e+07 50.1818 0.00503785 0.993962 0 50.0203 GTEX-U4B1-1426-SM-4DXTX 1 B1 2 pieces, 7x9.5 & 9.3x8 mm; no hyperplasia 8 Prostate Prostate 0002367 203 1213 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.985639 440128 0.960111 0.989114 0.718793 24680 1 76 0.00247447 130 0 6.60391e+07 0.0396038 248834 6.67659e+07 6.31862e+06 24718 3.27993e+07 0 0.241318 0.989114 0.710969 6.60391e+07 0.00334541 1.44189e+07 7.16101e+06 1.44487e+07 143 1.45278e+07 8.97722e+06 0.00290841 1.45608e+07 50.0567 0.00372696 0.99259 0 50.0517 GTEX-U4B1-1526-SM-4DXSL 1 B1 2 pieces, 7.6x5.3 & 8x11 mm; spermatogenesis 7.1 Testis Testis 0000473 224 1192 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.98755 441416 0.930571 0.990566 0.723377 31234 1 76 0.00231686 124 0 6.08187e+07 0.0691173 471673 6.13979e+07 5.23957e+06 31284 3.02346e+07 0 0.207194 0.990566 0.716552 6.08187e+07 0.00310315 1.2727e+07 8.46039e+06 1.27348e+07 120 1.28239e+07 1.01922e+07 0.00270881 1.28074e+07 49.9679 0.00768223 0.993581 0 50.0152 GTEX-U4B1-1626-SM-3DB8N 0 B1 2 pieces, 18.3x6.8 & 8.5x8.4 mm; no extraneous adipose 7.9 Muscle Muscle - Skeletal 0011907 240 1176 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.933121 174759 0.981647 0.933515 0.878986 19703 1 76 0.00220357 203 0 7.92164e+07 0.0180763 1.23774e+06 8.48583e+07 7.20168e+06 19713 3.93825e+07 0 0.10266 0.933515 0.820546 7.92164e+07 0.00354636 1.7196e+07 1.01238e+07 1.74383e+07 205 1.7404e+07 1.55446e+07 0.00287468 1.72549e+07 49.7849 0.014586 0.933908 0 50.3499 GTEX-U4B1-1726-SM-3DB9F 1 B1 2 pieces, 9.5x16.9 & 15.2x9.7 mm; 1 piece has a ~40% fibrous component 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 242 1174 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.965862 288700 0.977038 0.966702 0.824422 22676 1 76 0.00226851 277 0 9.07702e+07 0.0226496 467947 9.38968e+07 7.40238e+06 22702 4.51618e+07 0 0.152615 0.966702 0.796971 9.07702e+07 0.00361415 1.99731e+07 8.96722e+06 2.02079e+07 263 2.02134e+07 1.62898e+07 0.00294075 2.00445e+07 49.7902 0.00498363 0.967543 0 50.2922 GTEX-U4B1-1826-SM-4DXSU 0 B1 6 pieces, up to 9.6x3 mm; well cleaned of subcutaneous adipose 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 245 1171 BP-25601 RNA isolation_PAXgene Tissue miRNA 05/23/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.988671 322400 0.970439 0.991195 0.766274 22949 1 76 0.00235381 121 0 5.75699e+07 0.0293135 606429 5.80813e+07 5.04288e+06 22974 2.86263e+07 0 0.204165 0.991195 0.759527 5.75699e+07 0.00313767 1.27268e+07 5.80062e+06 1.2728e+07 134 1.27512e+07 8.63823e+06 0.00274474 1.2844e+07 50.1813 0.010441 0.993719 0 50.0023 GTEX-U4B1-1926-SM-3DB9E 0 B1 2 pieces, 3.9x5.6 & 5.5x4.7 mm; focal medial calcification in one piece; small vein at periphery of other piece; clean of extraneous adipose 7.9 Blood Vessel Artery - Tibial 0007610 252 1164 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.977403 254339 0.975218 0.978094 0.828369 21412 1 76 0.00223863 207 0 8.40363e+07 0.0243687 243948 8.59185e+07 7.30641e+06 21432 4.17957e+07 0 0.146849 0.978094 0.810222 8.40363e+07 0.00355938 1.82221e+07 7.05365e+06 1.84576e+07 203 1.84497e+07 1.63563e+07 0.00289854 1.82891e+07 49.7814 0.0028393 0.978785 0 50.321 GTEX-U8T8-0005-SM-3DB8F C1 8.3 Blood Whole Blood 0013756 857 BP-24412 RNA isolation_PAXgene Blood RNA (Manual) 04/20/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.930256 253030 0.984272 0.931183 0.790652 17926 1 76 0.00242707 102 0 7.7813e+07 0.0151449 171574 8.35636e+07 6.84008e+06 17936 3.87106e+07 0 0.19362 0.931183 0.736241 7.7813e+07 0.00398686 1.81476e+07 9.71015e+07 1.84875e+07 128 1.84856e+07 1.97447e+07 0.00320619 1.82202e+07 49.6385 0.00205321 0.932109 0 50.464 GTEX-U8T8-0008-SM-4DXSP C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 976 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.99118 507666 0.972074 0.993571 0.840307 20620 1 76 0.00200028 180 0 7.24023e+07 0.0274986 165418 7.28708e+07 6.27643e+06 20640 3.60317e+07 0 0.131767 0.993571 0.834905 7.24023e+07 0.00264474 1.61584e+07 9.77769e+06 1.61378e+07 168 1.62289e+07 1.56977e+07 0.00232174 1.62314e+07 50.004 0.00227002 0.995961 0 49.9681 GTEX-U8T8-0126-SM-3DB94 1 C1 6 pieces, up to 3.4x7.7mm; subcutaneous adipose well trimmed 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 975 863 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.911808 192876 0.975134 0.912476 0.822845 22679 1 76 0.00229836 212 0 8.05897e+07 0.0246383 468137 8.83198e+07 7.82482e+06 22702 4.00643e+07 0 0.152288 0.912476 0.750827 8.05897e+07 0.00372966 1.76879e+07 9.57764e+06 1.79383e+07 204 1.79137e+07 1.42742e+07 0.00301349 1.77694e+07 49.7978 0.00530047 0.913144 0 50.3514 GTEX-U8T8-0226-SM-3DB97 0 C1 2 pieces, 6x7 & 6x7.5mm ;focal acute hemorrhages, possibly due to trauma 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 979 859 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 EXCLUDE 0.536788 5.47979e+06 0.585746 0.534528 0.31347 19562 1 76 0.00221456 94 0 5.40915e+07 0.411339 1.42990e+06 1.01195e+08 1.02701e+07 19575 2.66557e+07 0 0.272276 0.534528 0.167558 5.40915e+07 0.00452823 6.91072e+06 2.5328e+08 7.75153e+06 102 7.59531e+06 2.60978e+06 0.00337629 6.97954e+06 47.8875 0.0141302 0.532269 0 52.8673 GTEX-U8T8-0326-SM-3DB93 1 C1 2 pieces, 2.7 & 3mm in diameter; no extraneous adipose 6 Blood Vessel Artery - Tibial 0007610 1031 808 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.980799 271650 0.969828 0.981475 0.787856 22129 1 76 0.0023308 160 0 8.18652e+07 0.0298822 500882 8.34103e+07 7.31955e+06 22163 4.06783e+07 0 0.181972 0.981475 0.773261 8.18652e+07 0.0035452 1.75811e+07 7.713e+06 1.77742e+07 197 1.77713e+07 1.33767e+07 0.00293758 1.7636e+07 49.809 0.00600504 0.982151 0 50.2731 GTEX-U8T8-0426-SM-3DB8X 1 C1 2 pieces, 6x3.3 & 6.2x 6.3mm; > 50% surrounding adipose 7.4 Nerve Nerve - Tibial 0001323 1033 806 BP-25630 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.979243 312545 0.966103 0.980116 0.732911 25185 1 76 0.00232172 290 0 1.1359e+08 0.0336193 369367 1.15894e+08 9.70926e+06 25246 5.64599e+07 0 0.233192 0.980116 0.718338 1.1359e+08 0.00368891 2.49046e+07 1.08993e+07 2.51124e+07 323 2.51507e+07 1.7126e+07 0.00300471 2.49655e+07 49.8153 0.00318711 0.980989 0 50.2077 GTEX-U8T8-1126-SM-4DXUE 1 C1 2 pieces, 4.5x8 & 6.6x6mm; moderate patchy tubular fibrosis; decreased spermatogenesis 5.7 Testis Testis 0000473 1118 725 BP-25632 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-3206 06/04/2013 TruSeq.v1 RNASEQ 0.983102 438894 0.939177 0.986726 0.735779 31779 1 76 0.00234432 142 0 6.98681e+07 0.0604743 622057 7.0808e+07 6.45753e+06 31831 3.46907e+07 0 0.203398 0.986726 0.726012 6.98681e+07 0.00327552 1.46898e+07 9.77064e+06 1.46792e+07 143 1.47843e+07 1.16884e+07 0.00280821 1.48182e+07 50.0573 0.00878513 0.990351 0 49.982 GTEX-U8T8-1226-SM-4E3IH 2 C1 6 pieces, up to 3x9.7mm; mucosa partially autolyzed 6.2 Stomach Stomach 0000945 1120 724 BP-25632 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.980603 438766 0.974191 0.985191 0.779873 22887 1 76 0.00273048 174 0 7.39021e+07 0.0253912 554477 7.50129e+07 8.40283e+06 22919 3.66422e+07 0 0.194318 0.985191 0.768324 7.39021e+07 0.00466174 1.62455e+07 1.45391e+07 1.63118e+07 171 1.63964e+07 1.18899e+07 0.00369161 1.64883e+07 50.1396 0.00739175 0.989779 0 50.1019 GTEX-U8T8-1426-SM-3DB9H 1 C1 2 pieces, 7x7 & 9x5mm; no extraneous adipose 7.2 Muscle Muscle - Skeletal 0011907 1125 721 BP-25632 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.982286 232769 0.98008 0.983072 0.86248 20301 1 76 0.00199613 273 0 9.93257e+07 0.0197212 1.49188e+06 1.01036e+08 8.10615e+06 20318 4.94283e+07 0 0.1176 0.983072 0.84788 9.93257e+07 0.00330392 2.17155e+07 1.31367e+07 2.20667e+07 324 2.20765e+07 1.84418e+07 0.0026495 2.17693e+07 49.6496 0.0147658 0.983858 0 50.401 GTEX-U8T8-2026-SM-3G3TN 1 C1 6 pieces, up to 7x3.4mm; 'clean' specimen without extraneous stroma or adipose Esophagus Esophagus - Muscularis 0004648 1145 705 BP-25741 DNA Isolation from Tissue via QIAgen Spin Column 05/29/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R05C01 GTEX-U8T8-2026-SM-3L286 1 C1 6 pieces, up to 7x3.4mm; 'clean' specimen without extraneous stroma or adipose Esophagus Esophagus - Muscularis 0004648 1145 705 BP-25741 DNA Isolation from Tissue via QIAgen Spin Column 05/29/2012 GTEx_Batch8_rOM5_Sept12 09/23/2012 Illumina OMNI SNP Array OMNI 8514840003_R03C01 GTEX-U8T8-2026-SM-4SVQM 1 C1 6 pieces, up to 7x3.4mm; 'clean' specimen without extraneous stroma or adipose Esophagus Esophagus - Muscularis 0004648 1145 705 BP-25741 DNA Isolation from Tissue via QIAgen Spin Column 05/29/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-U8T8-2026-SM-7DRPP 1 C1 6 pieces, up to 7x3.4mm; 'clean' specimen without extraneous stroma or adipose Esophagus Esophagus - Muscularis 0004648 1145 705 BP-25741 DNA Isolation from Tissue via QIAgen Spin Column 05/29/2012 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U8T8-2226-SM-3DB95 1 C1 2 pieces, 8.5x7 & 5x6.3mm; small arteries thickened; heart failure cells 6.4 Lung Lung 0008952 1149 702 BP-25740 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.931817 2.3697e+06 0.860598 0.93271 0.640437 23735 1 76 0.00248751 119 0 7.09778e+07 0.138747 577496 7.60985e+07 6.11681e+06 23767 3.52597e+07 0 0.220161 0.93271 0.597342 7.09778e+07 0.00393248 1.36426e+07 9.57008e+07 1.40922e+07 132 1.40976e+07 9.32617e+06 0.0032093 1.3753e+07 49.3813 0.0075888 0.933604 0 50.8105 GTEX-U8T8-2326-SM-3DB96 2 C1 2 pieces, 6x7 & 6.7x7.3mm 7.2 Thyroid Thyroid 0002046 1151 701 BP-25740 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.978878 207856 0.967672 0.979615 0.766615 23730 1 76 0.00236884 141 0 7.69627e+07 0.031993 127754 7.85642e+07 6.62773e+06 23767 3.82596e+07 0 0.201057 0.979615 0.750988 7.69627e+07 0.00363718 1.67723e+07 8.91044e+06 1.6927e+07 163 1.69494e+07 1.36052e+07 0.00300253 1.68087e+07 49.7915 0.00162611 0.980351 0 50.2296 GTEX-U8XE-0004-SM-3G3SU C1 Blood Whole Blood 0013756 274 BP-24463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003046_R03C01 GTEX-U8XE-0004-SM-3G3TV C1 Blood Whole Blood 0013756 274 BP-24463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R01C02 GTEX-U8XE-0004-SM-3USQS C1 Blood Whole Blood 0013756 274 BP-24463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-U8XE-0004-SM-5URB8 C1 Blood Whole Blood 0013756 274 BP-24463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/23/2012 LCSET-5270,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-U8XE-0005-SM-3DB8I C1 9.1 Blood Whole Blood 0013756 274 BP-24494 RNA isolation_PAXgene Blood RNA (Manual) 04/24/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.911532 312636 0.975748 0.911521 0.816921 20604 1 76 0.00232198 153 0 7.76854e+07 0.0239314 204432 8.5226e+07 8.47429e+06 20619 3.8624e+07 0 0.158827 0.911521 0.744641 7.76854e+07 0.00377925 1.72836e+07 1.82989e+07 1.75816e+07 162 1.75546e+07 1.74452e+07 0.00305062 1.73163e+07 49.6584 0.0023987 0.911511 0 50.4274 GTEX-U8XE-0008-SM-4E3K4 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 358 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989882 944558 0.964108 0.992766 0.838884 21548 1 76 0.00226648 179 0 8.82082e+07 0.0355983 436141 8.8851e+07 1.00236e+07 21565 4.3864e+07 0 0.125225 0.992766 0.832815 8.82082e+07 0.00330035 1.93218e+07 2.3959e+07 1.95066e+07 187 1.95939e+07 2.1364e+07 0.00278191 1.94988e+07 49.8784 0.00490868 0.99565 0 50.238 GTEX-U8XE-0126-SM-4E3I3 1 C1 2 pieces 7x5mm. Spermatogenesis present 6.7 Testis Testis 0000473 338 919 BP-25632 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986963 604895 0.930311 0.989805 0.723749 31685 1 76 0.00258595 141 0 7.06109e+07 0.0694022 1.01395e+06 7.13382e+07 7.60352e+06 31741 3.50939e+07 0 0.206562 0.989805 0.716371 7.06109e+07 0.00387626 1.47071e+07 1.22582e+07 1.47349e+07 146 1.4812e+07 1.06267e+07 0.00322925 1.4816e+07 50.0067 0.0142132 0.992647 0 50.0472 GTEX-U8XE-0226-SM-4E3J3 0 C1 6 pieces ~6x3; squamous epithelium is 2-3% of thickness 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 356 901 BP-25632 RNA isolation_PAXgene Tissue miRNA 05/24/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986693 535943 0.976487 0.989733 0.808363 22778 1 76 0.00253627 166 0 7.84897e+07 0.0232911 450193 7.93039e+07 8.9185e+06 22803 3.90043e+07 0 0.168124 0.989733 0.800063 7.84897e+07 0.00359776 1.73223e+07 9.22162e+06 1.73736e+07 183 1.74373e+07 1.3701e+07 0.00306538 1.74933e+07 50.0801 0.00567681 0.992773 0 50.074 GTEX-U8XE-0326-SM-3DB8P 0 C1 6 pieces ~7x3.5 mm, squamous epithelium is ~2-3% of thickness 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 358 900 BP-25740 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.972312 186429 0.975238 0.97294 0.804712 23756 1 76 0.00225906 233 0 8.94226e+07 0.0245231 594454 9.19096e+07 6.9477e+06 23781 4.44848e+07 0 0.170526 0.97294 0.782937 8.94226e+07 0.0035298 1.95415e+07 1.02894e+07 1.97719e+07 245 1.97497e+07 1.55244e+07 0.00289402 1.96176e+07 49.8322 0.00646781 0.973569 0 50.293 GTEX-U8XE-0426-SM-3DB91 0 C1 2 pieces ~7x6mm 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 361 897 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.936601 177943 0.976399 0.93749 0.812943 21493 1 76 0.00218928 159 0 6.98221e+07 0.0233524 546862 7.44777e+07 6.65064e+06 21516 3.4715e+07 0 0.163456 0.93749 0.762126 6.98221e+07 0.00352871 1.53911e+07 6.7553e+06 1.5561e+07 176 1.55462e+07 1.1114e+07 0.00285836 1.54674e+07 49.873 0.00734263 0.938378 0 50.2745 GTEX-U8XE-0526-SM-3DB8R 0 C1 2 pieces ~4mm d. Good clean specimens 8 Nerve Nerve - Tibial 0001323 376 883 BP-25740 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.824598 194821 0.972456 0.824944 0.771135 22845 1 76 0.00222464 137 0 6.94776e+07 0.0272806 354796 8.4221e+07 9.1041e+06 22875 3.44937e+07 0 0.201321 0.824944 0.636143 6.94776e+07 0.00387725 1.52523e+07 7.16788e+06 1.54507e+07 155 1.54444e+07 1.14895e+07 0.0030506 1.52882e+07 49.746 0.00421268 0.82529 0 50.3232 GTEX-U8XE-0626-SM-3DB8U 0 C1 2 pieces ~2mm d. Good clean specimens 8.2 Blood Vessel Artery - Tibial 0007610 380 880 BP-25740 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.970909 198176 0.975681 0.971569 0.818364 20729 1 76 0.00219538 164 0 8.18751e+07 0.0239755 355736 8.4271e+07 6.73624e+06 20745 4.07224e+07 0 0.157317 0.971569 0.795098 8.18751e+07 0.00351654 1.76286e+07 7.18145e+06 1.78483e+07 198 1.78367e+07 1.51929e+07 0.00285551 1.7694e+07 49.7991 0.00422133 0.972229 0 50.3097 GTEX-U8XE-0726-SM-3DB8O 0 C1 2 pieces ~7x6mm. Minimal interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 384 876 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.956315 184242 0.982922 0.957293 0.86965 18855 1 76 0.00186028 204 0 7.9525e+07 0.0168429 704191 8.30727e+07 6.41549e+06 18864 3.95681e+07 0 0.113272 0.957293 0.83251 7.9525e+07 0.00340781 1.73481e+07 8.90343e+06 1.76501e+07 211 1.76207e+07 1.60455e+07 0.00263326 1.74451e+07 49.7496 0.0084768 0.958272 0 50.4315 GTEX-U8XE-0826-SM-4E3J1 1 C1 2 pieces ~7x4mm. Fibroadipose tissue only, no ductal elements seen 6.2 Breast Breast - Mammary Tissue 0008367 399 861 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988053 467582 0.976551 0.990852 0.843871 21907 1 76 0.00242502 207 0 8.70515e+07 0.0231957 818793 8.78552e+07 9.16205e+06 21926 4.3285e+07 0 0.13268 0.990852 0.836152 8.70515e+07 0.00383767 1.9243e+07 1.03672e+07 1.93232e+07 246 1.9339e+07 1.42714e+07 0.00312935 1.94625e+07 50.1592 0.00931981 0.993652 0 50.104 GTEX-U8XE-0926-SM-3DB8V 1 C1 2 pieces ~9x9mm 7.9 Heart Heart - Atrial Appendage 0006631 402 859 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.987359 196456 0.978951 0.988025 0.824403 21567 1 76 0.00195942 266 0 8.8832e+07 0.0208204 1.57877e+06 8.99086e+07 6.52738e+06 21585 4.4232e+07 0 0.154548 0.988025 0.814531 8.8832e+07 0.00313769 1.92287e+07 1.2156e+07 1.94426e+07 308 1.94009e+07 1.32078e+07 0.00254816 1.93217e+07 49.8978 0.0175597 0.988692 0 50.2765 GTEX-U8XE-1026-SM-4E3HM 1 C1 2 pieces ~2.5mm d. Minimal atherosis, one has nubbin of adherent fat ~1mm d. 8.4 Blood Vessel Artery - Coronary 0001621 404 857 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987373 417206 0.976358 0.990693 0.820238 22057 1 76 0.00243503 196 0 8.82833e+07 0.0233182 237340 8.91127e+07 1.01493e+07 22072 4.38721e+07 0 0.15612 0.990693 0.812604 8.82833e+07 0.00382917 1.9171e+07 7.36045e+06 1.92645e+07 209 1.93566e+07 1.66397e+07 0.00312976 1.93633e+07 50.0086 0.00266337 0.994014 0 50.1217 GTEX-U8XE-1126-SM-3DB8W 1 C1 2 pieces 7x6mm. No significant ischemic changes 8.1 Heart Heart - Left Ventricle 0006566 406 856 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.607481 159329 0.982433 0.605204 0.84281 19997 1 76 0.00197825 119 0 5.90169e+07 0.017335 1.01714e+06 9.75158e+07 1.00488e+07 20004 2.92153e+07 0 0.139623 0.605204 0.510072 5.90169e+07 0.00394436 1.30238e+07 7.98875e+06 1.33534e+07 146 1.3234e+07 9.64196e+06 0.002965 1.29309e+07 49.4209 0.0104305 0.602927 0 50.6249 GTEX-U8XE-1226-SM-4E3HN 1 C1 6 pieces ~9x2mm. Minimal atherosis, several with adherent layer of serosal fat up to ~0.5m 7.9 Blood Vessel Artery - Aorta 0001496 408 854 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987747 573150 0.974415 0.990951 0.817186 21961 1 76 0.00247855 193 0 8.7862e+07 0.0252444 212122 8.86643e+07 9.83204e+06 21984 4.3644e+07 0 0.15723 0.990951 0.809791 8.7862e+07 0.00407088 1.91114e+07 8.80953e+06 1.92705e+07 206 1.93436e+07 1.61492e+07 0.00327214 1.93154e+07 49.9636 0.00239242 0.994155 0 50.2072 GTEX-U8XE-1326-SM-4E3JK 1 C1 6 pieces, muscle only per protocol, ~ 7x2mm 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 414 849 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986368 621437 0.970477 0.989877 0.772982 23563 1 76 0.00254948 205 0 9.82174e+07 0.0293002 492861 9.92218e+07 1.09465e+07 23603 4.87952e+07 0 0.197495 0.989877 0.765158 9.82174e+07 0.00397154 2.14806e+07 1.02485e+07 2.15702e+07 245 2.16671e+07 1.54338e+07 0.00325799 2.17179e+07 50.0585 0.00496727 0.993386 0 50.1041 GTEX-U8XE-1426-SM-3DB8Q 1 C1 2 pieces ~7x6mm. Well preserved, mild emphysematous changes. Good bronchial preservation, representative bronchioles encircled 8.8 Lung Lung 0008952 416 848 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.973952 354748 0.976856 0.974828 0.79253 24665 1 76 0.00232905 276 0 1.17408e+08 0.0227027 436638 1.2044e+08 8.98616e+06 24715 5.84216e+07 0 0.184326 0.974828 0.77258 1.17408e+08 0.00354282 2.60291e+07 1.14357e+07 2.64142e+07 315 2.64243e+07 2.16515e+07 0.00293539 2.61162e+07 49.7068 0.00362536 0.975704 0 50.3671 GTEX-U8XE-1526-SM-4E3HT 1 C1 2 pieces ~7x6mm. Diffuse macrovesicular steatosis involves 50-60% of parenchyma, with focal early bridging fibrosis 7.8 Liver Liver 0001114 418 846 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988446 715351 0.979711 0.991564 0.866085 20218 1 76 0.00242642 201 0 9.36603e+07 0.0200181 896329 9.44572e+07 9.84089e+06 20229 4.6559e+07 0 0.113626 0.991564 0.858778 9.36603e+07 0.00372772 2.06241e+07 1.90466e+07 2.06819e+07 248 2.07883e+07 1.93278e+07 0.00307502 2.0802e+07 50.0165 0.00948926 0.994682 0 50.0699 GTEX-U8XE-1726-SM-4E3IF 1 C1 6 pieces ~6x1.5mm, Squamous mucosa is ~10% thickness 9.1 Esophagus Esophagus - Mucosa 0006920 421 845 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.968181 552239 0.971471 0.971202 0.791918 22083 1 76 0.00272461 143 0 7.27356e+07 0.0282648 156036 7.48923e+07 8.14163e+06 22099 3.61483e+07 0 0.179553 0.971202 0.769112 7.27356e+07 0.00420617 1.62438e+07 1.30657e+07 1.63022e+07 154 1.63899e+07 1.37114e+07 0.00346309 1.63781e+07 49.982 0.00208347 0.974222 0 50.0898 GTEX-U8XE-1826-SM-4E3HV 1 C1 6 pieces ~7x3.5mm 8.3 Esophagus Esophagus - Muscularis 0004648 423 843 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988031 652781 0.972352 0.991004 0.801722 22977 1 76 0.00247019 208 0 9.75123e+07 0.0274079 467673 9.83975e+07 1.09545e+07 23007 4.84599e+07 0 0.17063 0.991004 0.794509 9.75123e+07 0.00373281 2.11778e+07 9.99658e+06 2.12961e+07 242 2.13495e+07 1.68831e+07 0.00309961 2.14086e+07 50.0691 0.00475289 0.993976 0 50.1393 GTEX-U8XE-1926-SM-3DB98 1 C1 2 pieces ~8x5mm, well preserved adipose tissue 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 425 842 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.930859 124222 0.97866 0.931706 0.864506 20793 1 76 0.00205959 161 0 6.67137e+07 0.0211122 644299 7.16038e+07 6.06716e+06 20806 3.31725e+07 0 0.114155 0.931706 0.805465 6.67137e+07 0.00361262 1.4759e+07 7.5108e+06 1.49858e+07 185 1.495e+07 1.08076e+07 0.0028354 1.48516e+07 49.8351 0.00899811 0.932553 0 50.3813 GTEX-U8XE-2026-SM-3DB8S 1 C1 2 pieces 7x6mm. Remarkably well preserved, ~20% interstitial/adherent fat; Islets well preserved, representative ones encircled 6.6 Pancreas Pancreas 0001150 428 839 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.924858 224011 0.974169 0.925278 0.793856 21883 1 76 0.00226778 138 0 8.49786e+07 0.0256433 346755 9.18412e+07 7.48918e+06 21911 4.22792e+07 0 0.180313 0.925278 0.734538 8.49786e+07 0.00369945 1.92308e+07 1.60635e+07 1.95135e+07 156 1.95081e+07 1.94609e+07 0.00298329 1.92821e+07 49.7086 0.00377559 0.925698 0 50.3648 GTEX-U8XE-2526-SM-4E3IT 1 C1 2 pieces ~8x7mm. Glandular mucosa extremely well preserved 7.2 Prostate Prostate 0002367 437 833 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98504 856675 0.946236 0.988282 0.736372 23884 1 76 0.00258266 152 0 7.8536e+07 0.0535595 491588 7.94672e+07 9.08374e+06 23912 3.90278e+07 0 0.209864 0.988282 0.727743 7.8536e+07 0.00400592 1.67005e+07 2.64316e+07 1.68534e+07 171 1.68858e+07 1.12276e+07 0.00329195 1.69383e+07 50.0775 0.00618605 0.991524 0 50.2277 GTEX-UJHI-0001-SM-3G3TR B1 Blood Whole Blood 0013756 82 BP-24662 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R06C01 GTEX-UJHI-0001-SM-3L287 B1 Blood Whole Blood 0013756 82 BP-24662 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 GTEx_Batch8_rOM5_Sept12 09/23/2012 Illumina OMNI SNP Array OMNI 8514840003_R04C01 GTEX-UJHI-0001-SM-4X62F B1 Blood Whole Blood 0013756 82 BP-24662 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-UJHI-0001-SM-5SOEU B1 Blood Whole Blood 0013756 82 BP-24662 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 LCSET-5226,LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-UJHI-0006-SM-3DB8H B1 7.9 Blood Whole Blood 0013756 81 BP-24792 RNA isolation_PAXgene Blood RNA (Manual) 04/30/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.900735 753333 0.951671 0.901535 0.82944 19702 1 76 0.00301811 128 0 6.31824e+07 0.0476012 239969 7.00831e+07 9.69078e+06 19710 3.14234e+07 0 0.122232 0.901535 0.747769 6.31824e+07 0.00446974 1.36223e+07 2.75631e+07 1.38638e+07 131 1.38866e+07 1.37054e+07 0.00374328 1.36564e+07 49.5821 0.00342406 0.902335 0 50.4393 GTEX-UJHI-0008-SM-4IHL1 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 310 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.991377 737546 0.970432 0.99308 0.837972 20763 1 76 0.00213256 168 0 8.40005e+07 0.0291776 205295 8.45858e+07 6.01018e+06 20781 4.1819e+07 0 0.13246 0.99308 0.832173 8.40005e+07 0.00279511 1.84673e+07 1.51907e+07 1.86449e+07 195 1.87352e+07 1.96249e+07 0.00246327 1.85186e+07 49.7092 0.00242706 0.994783 0 50.2392 GTEX-UJHI-0126-SM-4IHLP 1 B1 2 pieces, 8x7 & 8x7mm; moderate congestion; discrete small lymphoid nodules 8.1 Spleen Spleen 0002106 141 1056 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.988392 419890 0.967218 0.990467 0.793431 23424 1 76 0.00302211 139 0 7.25326e+07 0.0317166 483131 7.32308e+07 5.38033e+06 23449 3.60588e+07 0 0.173788 0.990467 0.785867 7.25326e+07 0.00377752 1.58927e+07 9.88894e+06 1.60793e+07 161 1.61331e+07 1.20197e+07 0.00339903 1.59774e+07 49.7575 0.00659738 0.992541 0 50.2919 GTEX-UJHI-0226-SM-4IHJL 1 B1 6 pieces, up to 10x1mm; flat atherosclerotic plaques; clean of periaortic adipose 7.4 Blood Vessel Artery - Aorta 0001496 147 1051 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.988371 295583 0.973875 0.990484 0.826806 21573 1 76 0.00237637 164 0 7.55668e+07 0.0257567 251636 7.62928e+07 5.41659e+06 21591 3.76077e+07 0 0.147069 0.990484 0.818938 7.55668e+07 0.00313462 1.5957e+07 6.10243e+06 1.61512e+07 179 1.61598e+07 1.35718e+07 0.00275469 1.61017e+07 49.91 0.00329829 0.992597 0 50.3024 GTEX-UJHI-0326-SM-4IHJE 1 B1 2 pieces, 4x1 & 6x2mm; fibrous plaques 6.4 Blood Vessel Artery - Coronary 0001621 158 1040 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.988198 270233 0.968984 0.990356 0.80182 21910 1 76 0.00252673 132 0 6.24171e+07 0.0307013 320804 6.30249e+07 4.65340e+06 21930 3.10479e+07 0 0.167164 0.990356 0.794087 6.24171e+07 0.00330717 1.3325e+07 4.8894e+06 1.34874e+07 143 1.34973e+07 1.03101e+07 0.0029161 1.34415e+07 49.8964 0.00509011 0.992513 0 50.303 GTEX-UJHI-0426-SM-3DB8Y 1 B1 2 pieces, 9x6 & 8x8mm; no adipose 8.7 Heart Heart - Left Ventricle 0006566 169 1029 BP-25734 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.971814 218739 0.981737 0.972501 0.847712 20763 1 76 0.00303995 267 0 9.1575e+07 0.0179625 1.74692e+06 9.41645e+07 7.55758e+06 20784 4.55703e+07 0 0.134025 0.972501 0.8244 9.1575e+07 0.0043203 1.95075e+07 1.55103e+07 2.00111e+07 256 1.98364e+07 1.49747e+07 0.00367967 1.97174e+07 49.8496 0.0185518 0.973187 0 50.6372 GTEX-UJHI-0626-SM-3DB8T 1 B1 2 pieces, 8x7.5 & 9x8mm; 1 mm adipose along one side of the smaller piece 7.6 Pancreas Pancreas 0001150 185 1014 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.974401 272879 0.978311 0.975149 0.836729 22257 1 76 0.00261582 158 0 1.03735e+08 0.021515 252591 1.06378e+08 7.92851e+06 22276 5.16504e+07 0 0.141582 0.975149 0.815935 1.03735e+08 0.00388981 2.36222e+07 2.40279e+07 2.40805e+07 176 2.40185e+07 2.83629e+07 0.00325232 2.37656e+07 49.7355 0.00237446 0.975897 0 50.4804 GTEX-UJHI-0726-SM-3DB92 0 B1 2 pieces, 9x7 & 9x7.5mm; no inflammation 7.1 Lung Lung 0008952 194 1006 BP-25737 RNA isolation_PAXgene Tissue miRNA 05/29/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.955448 190609 0.966452 0.95618 0.76019 24108 1 76 0.00293876 134 0 7.40297e+07 0.0329593 524956 7.74223e+07 6.81599e+06 24139 3.67916e+07 0 0.206262 0.95618 0.726879 7.40297e+07 0.00431603 1.61821e+07 8.54164e+06 1.64313e+07 164 1.64049e+07 1.04934e+07 0.00362687 1.62606e+07 49.7792 0.00678042 0.956913 0 50.382 GTEX-UJHI-0826-SM-4IHLM 1 B1 6 pieces, up to 3x5.5mm; all with good mucosa 9.7 Esophagus Esophagus - Mucosa 0006920 207 993 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.990825 334586 0.971439 0.992668 0.808625 21371 1 76 0.00241066 117 0 5.22147e+07 0.0282293 289722 5.26004e+07 3.49861e+06 21384 2.59878e+07 0 0.162813 0.992668 0.802696 5.22147e+07 0.00313641 1.16339e+07 8.48728e+06 1.17683e+07 115 1.18061e+07 9.87276e+06 0.00277286 1.16866e+07 49.7456 0.00550798 0.99451 0 50.2873 GTEX-UJHI-0926-SM-4IHKF 0 B1 6 pieces, up to 11x5mm; good clean specimens 7.2 Esophagus Esophagus - Muscularis 0004648 212 989 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.989665 366961 0.973123 0.991554 0.816079 22189 1 76 0.00265251 167 0 7.59782e+07 0.0266384 701071 7.66253e+07 5.63252e+06 22215 3.78174e+07 0 0.157043 0.991554 0.809187 7.59782e+07 0.00341436 1.62767e+07 7.06556e+06 1.6549e+07 186 1.65249e+07 1.16777e+07 0.00303271 1.64274e+07 49.8521 0.00914934 0.993444 0 50.4147 GTEX-UJHI-1026-SM-4IHJP 1 B1 6 pieces, up to 12x4mm; only 3 have mucosa; one has no muscularis 7.9 Stomach Stomach 0000945 219 982 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.987158 428290 0.974251 0.98896 0.841252 21945 1 76 0.00233292 145 0 6.9687e+07 0.0254271 442134 7.04649e+07 4.76891e+06 21961 3.4682e+07 0 0.132999 0.98896 0.831964 6.9687e+07 0.00308209 1.50753e+07 9.08076e+06 1.5259e+07 164 1.52614e+07 1.28349e+07 0.00270682 1.51934e+07 49.8884 0.00627453 0.990762 0 50.3028 GTEX-UJHI-1126-SM-4IHLN 1 B1 6 pieces, up to 8x4mm; good mucosa and muscularis on all 7.4 Colon Colon - Transverse 0001157 226 975 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.987011 291979 0.973781 0.988851 0.823885 22597 1 76 0.00345499 174 0 7.13797e+07 0.0244548 1.17091e+06 7.21845e+07 4.95657e+06 22620 3.54717e+07 0 0.149896 0.988851 0.8147 7.13797e+07 0.00424458 1.57107e+07 1.01911e+07 1.59342e+07 171 1.59489e+07 1.06906e+07 0.00384905 1.58041e+07 49.772 0.0162211 0.990691 0 50.3531 GTEX-UJHI-1226-SM-4IHLR 0 B1 2 pieces, 9x7 & 10x9mm; various corpora; no obvious ova 6.8 Ovary Ovary 0000992 241 961 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.987141 370467 0.964255 0.989688 0.732426 22365 1 76 0.00249767 129 0 6.54087e+07 0.0355467 163960 6.60902e+07 4.66084e+06 22399 3.25302e+07 0 0.23183 0.989688 0.724873 6.54087e+07 0.00321645 1.42326e+07 7.41908e+06 1.44183e+07 135 1.44679e+07 1.0773e+07 0.00285614 1.43393e+07 49.7768 0.00248085 0.992236 0 50.3241 GTEX-UJHI-1326-SM-4IHJO 0 B1 6 pieces, up to 5x8mm; well preserved 6.5 Vagina Vagina 0000996 253 949 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.988134 322764 0.970022 0.990018 0.791462 22863 1 76 0.00243559 137 0 6.61656e+07 0.0296726 214392 6.68327e+07 4.68684e+06 22892 3.29283e+07 0 0.178561 0.990018 0.783562 6.61656e+07 0.00319174 1.43208e+07 5.72803e+06 1.44903e+07 149 1.45014e+07 1.10412e+07 0.00281294 1.44301e+07 49.8769 0.00320789 0.991903 0 50.294 GTEX-UJHI-1426-SM-3DB9C 0 B1 2 pieces, 9x6 & 8x7mm; numerous terminal ducts and lobules; stroma is more fibrous than fatty 7.5 Breast Breast - Mammary Tissue 0008367 263 940 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.616899 131000 0.96773 0.615719 0.794974 22851 1 76 0.00277127 113 0 4.76761e+07 0.0315373 204600 7.74316e+07 8.03958e+06 22871 2.35613e+07 0 0.172756 0.615719 0.48948 4.76761e+07 0.00517556 1.03482e+07 5.50831e+06 1.06074e+07 112 1.0532e+07 8.25199e+06 0.00397572 1.03303e+07 49.5166 0.00264233 0.614539 0 50.6185 GTEX-UJHI-1526-SM-3DB99 1 B1 6 pieces. up to 6x3mm; free of subcutaneous adipose 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 287 916 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.720036 123205 0.975357 0.719521 0.849813 20992 1 76 0.00262609 152 0 5.13891e+07 0.0244093 250679 7.14212e+07 7.14175e+06 21002 2.54721e+07 0 0.125543 0.719521 0.611459 5.13891e+07 0.00467114 1.10774e+07 6.54246e+06 1.12896e+07 126 1.12377e+07 9.36377e+06 0.00364935 1.10914e+07 49.6723 0.00350987 0.719006 0 50.4744 GTEX-UJHI-1626-SM-3DB9A 1 B1 2 pieces, 8x6 & 12x6mm; ~20% fibrous stroma separates adipose into lobules 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 291 913 BP-25967 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.968334 220255 0.973697 0.969043 0.821834 22954 1 76 0.00249289 213 0 8.74358e+07 0.0260186 313197 9.02291e+07 8.17974e+06 22982 4.34998e+07 0 0.151863 0.969043 0.796392 8.74358e+07 0.0038045 1.90604e+07 9.55249e+06 1.93263e+07 229 1.93082e+07 1.54765e+07 0.00314822 1.91432e+07 49.7855 0.00347113 0.969751 0 50.3464 GTEX-UJHI-1726-SM-3DB9B 1 B1 2 pieces, 10x6.5 & 10x6mm; <5% extraneous adipose 8.2 Muscle Muscle - Skeletal 0011907 297 907 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.978311 195418 0.979627 0.97905 0.86317 19817 1 76 0.00260166 209 0 8.58856e+07 0.0201304 789250 8.77234e+07 6.52495e+06 19828 4.27577e+07 0 0.116457 0.97905 0.845086 8.58856e+07 0.00390174 1.83836e+07 1.007e+07 1.8736e+07 219 1.87063e+07 1.64552e+07 0.00325121 1.84652e+07 49.6758 0.00899703 0.979789 0 50.4747 GTEX-UJHI-1926-SM-3DB8Z 1 B1 2 pieces, 3 & 3mm in diameter; no plaques, no calcium, no extraneous adipose 7.4 Blood Vessel Artery - Tibial 0007610 302 903 BP-25965 RNA isolation_PAXgene Tissue miRNA 06/05/2012 LCSET-1898 09/11/2012 TruSeq.v1 RNASEQ 0.980178 212083 0.971756 0.980961 0.816241 21610 1 76 0.00251703 203 0 8.47128e+07 0.0279065 339690 8.63569e+07 7.0163e+06 21638 4.21231e+07 0 0.155515 0.980961 0.8007 8.47128e+07 0.00381669 1.80936e+07 7.18921e+06 1.83098e+07 206 1.82973e+07 1.48707e+07 0.00316634 1.81691e+07 49.8242 0.00393356 0.981744 0 50.2969 GTEX-UJMC-0002-SM-3G3ST B1 Blood Whole Blood 0013756 -61 BP-24674 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003012_R03C01 GTEX-UJMC-0002-SM-3G3TU B1 Blood Whole Blood 0013756 -61 BP-24674 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R05C02 GTEX-UJMC-0002-SM-4X626 B1 Blood Whole Blood 0013756 -61 BP-24674 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-UJMC-0002-SM-5SOEI B1 Blood Whole Blood 0013756 -61 BP-24674 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/26/2012 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-UJMC-0005-SM-3GACU B1 7.7 Blood Whole Blood 0013756 -61 BP-24792 RNA isolation_PAXgene Blood RNA (Manual) 04/30/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.929153 265191 0.967744 0.933036 0.804809 18801 1 76 0.00314155 113 0 7.35925e+07 0.0313107 109408 7.88742e+07 1.38798e+07 18812 3.65185e+07 0 0.162936 0.933036 0.750915 7.35925e+07 0.0103486 1.629e+07 4.95809e+07 1.65507e+07 136 1.66902e+07 1.53474e+07 0.00673007 1.64459e+07 49.6315 0.00138712 0.936919 0 50.3969 GTEX-UJMC-0008-SM-4IHKK B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 237 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.991164 844693 0.97879 0.992935 0.868094 20225 1 76 0.00190482 228 0 9.14717e+07 0.020879 161645 9.21225e+07 6.24123e+06 20238 4.55324e+07 0 0.110696 0.992935 0.861961 9.14717e+07 0.00251603 2.05271e+07 1.25136e+07 2.06262e+07 248 2.07475e+07 2.39484e+07 0.00220988 2.05653e+07 49.7794 0.00175467 0.994706 0 50.1204 GTEX-UJMC-0226-SM-4IHLH 1 B1 2 pieces ~11x6mm, well preserved; promient medulla presentp to 2mm d., and encircled in both. Abundant adherent fat up to ~3mm on both 7.5 Adrenal Gland Adrenal Gland 0002369 137 1096 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.989743 331568 0.978647 0.991985 0.846479 21380 1 76 0.00250512 127 0 6.36917e+07 0.021063 934928 6.42063e+07 4.66964e+06 21393 3.16958e+07 0 0.132168 0.991985 0.839695 6.36917e+07 0.00317316 1.40312e+07 7.625e+06 1.4234e+07 161 1.42519e+07 9.89835e+06 0.00283838 1.41332e+07 49.7909 0.0145613 0.994227 0 50.3586 GTEX-UJMC-0326-SM-3GAE2 1 B1 2 pieces, ~11x7mm 8 Thyroid Thyroid 0002046 134 1099 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.638084 212061 0.959417 0.643315 0.703922 23433 1 76 0.0026008 112 0 5.39113e+07 0.0402037 163341 8.38023e+07 1.43282e+07 23467 2.66042e+07 0 0.255495 0.643315 0.452844 5.39113e+07 0.00948208 1.15312e+07 7.11286e+06 1.17016e+07 120 1.18843e+07 8.14112e+06 0.00601346 1.17588e+07 49.7347 0.00194912 0.648546 0 50.3667 GTEX-UJMC-0426-SM-4IHJF 1 B1 2 pieces,' 2mm d subtotally occlusive atherosclesosis. Adherent fat up to 1.5 mm in both 7.2 Blood Vessel Artery - Coronary 0001621 149 1084 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.986892 529021 0.971338 0.989097 0.808104 22599 1 76 0.00234441 151 0 7.25671e+07 0.0283908 307353 7.3367e+07 5.04164e+06 22616 3.60835e+07 0 0.163235 0.989097 0.799293 7.25671e+07 0.00319607 1.56383e+07 7.16207e+06 1.58365e+07 173 1.5822e+07 1.18358e+07 0.00276929 1.58092e+07 49.9797 0.00418925 0.991303 0 50.3149 GTEX-UJMC-0526-SM-3GAE3 1 B1 2 pieces, patchy fibrotic infarcts present in both, encircled 8.4 Heart Heart - Left Ventricle 0006566 156 1077 BP-26092 RNA isolation_PAXgene Tissue miRNA 06/08/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.934111 271071 0.978299 0.939328 0.861778 22040 1 76 0.00260313 191 0 9.67414e+07 0.021461 1.97105e+06 1.0299e+08 1.55068e+07 22054 4.79945e+07 0 0.116521 0.939328 0.809493 9.67414e+07 0.00935966 2.1085e+07 1.23272e+07 2.14568e+07 220 2.15209e+07 1.65888e+07 0.00596263 2.14811e+07 49.9537 0.0191382 0.944545 0 50.437 GTEX-UJMC-0626-SM-4IHJQ 1 B1 6 pieces, ~9x1.5mm, adherent fat in several, up to 1mm thick 7.6 Blood Vessel Artery - Aorta 0001496 160 1073 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.987421 402517 0.973775 0.989703 0.821672 22224 1 76 0.00228517 162 0 7.6733e+07 0.025828 147377 7.75314e+07 5.75014e+06 22241 3.8176e+07 0 0.152103 0.989703 0.813211 7.6733e+07 0.00300796 1.65817e+07 6.27739e+06 1.67831e+07 186 1.68312e+07 1.39202e+07 0.00264573 1.67036e+07 49.8097 0.00190087 0.991985 0 50.3019 GTEX-UJMC-0726-SM-3GADX 1 B1 2 pieces, ~12x6mm bronchial mucosa seen, encircled. Minimal congestion, well preserved 8.3 Lung Lung 0008952 164 1069 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.975743 298075 0.969511 0.980378 0.774678 24895 1 76 0.00276944 165 0 9.35268e+07 0.0301027 362888 9.53986e+07 1.32603e+07 24933 4.64e+07 0 0.194833 0.980378 0.759477 9.35268e+07 0.00970239 2.05131e+07 8.94632e+06 2.07922e+07 192 2.09702e+07 1.56855e+07 0.00621953 2.07525e+07 49.739 0.00380391 0.985014 0 50.3378 GTEX-UJMC-0926-SM-4IHLK 0 B1 6 pieces ~7x2mm. Squamous mucosa up to 250 microns thick 8.6 Esophagus Esophagus - Mucosa 0006920 179 1054 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.989434 366390 0.973501 0.99142 0.808481 22511 1 76 0.00242061 117 0 5.67822e+07 0.0262137 300486 5.72736e+07 4.09416e+06 22527 2.82559e+07 0 0.16502 0.99142 0.801544 5.67822e+07 0.00314276 1.26776e+07 7.72393e+06 1.28404e+07 127 1.28628e+07 1.0357e+07 0.00278096 1.27616e+07 49.8026 0.0052465 0.993405 0 50.319 GTEX-UJMC-1026-SM-4IHKN 1 B1 7 pieces ~8x4mm 8.1 Esophagus Esophagus - Muscularis 0004648 182 1051 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.990561 1.67504e+06 0.971746 0.992356 0.811582 27163 1 76 0.00229113 543 0 3.28843e+08 0.0279153 1.97704e+06 3.31376e+08 2.24969e+07 27230 1.63693e+08 0 0.160164 0.992356 0.805378 3.28843e+08 0.00304172 7.07546e+07 3.17863e+07 7.16973e+07 465 7.16835e+07 5.66772e+07 0.00266574 7.132e+07 49.8729 0.00596615 0.994151 0 50.3309 GTEX-UJMC-1126-SM-3GADP 1 B1 2 pieces, ~11x9mm, well preserved, ~20% interstitital and adherent fat. Islets well- visualized, representative ones encircled 6.9 Pancreas Pancreas 0001150 185 1048 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.691567 145607 0.97048 0.709534 0.813299 21231 1 76 0.0030377 105 0 4.01603e+07 0.0293373 163824 5.66009e+07 1.20762e+07 21243 1.9493e+07 0 0.157181 0.709534 0.577064 4.01603e+07 0.0123937 8.86614e+06 1.3767e+07 9.05376e+06 118 9.47977e+06 1.04327e+07 0.00759722 9.41427e+06 49.8267 0.00289437 0.727502 0 50.5235 GTEX-UJMC-1226-SM-4IHLI 1 B1 6 pieces, ~6x3mm mucosa remarkably well-preserved, up to 600 microns thick 6.1 Stomach Stomach 0000945 195 1038 BP-26180 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.976719 261190 0.981916 0.978757 0.856324 21195 1 76 0.00265913 255 0 6.84461e+07 0.0175864 725570 6.99316e+07 4.99283e+06 21208 3.40325e+07 0 0.125593 0.978757 0.838133 6.84461e+07 0.00343797 1.58232e+07 9.00346e+07 1.61016e+07 178 1.61474e+07 1.92964e+07 0.00304774 1.59086e+07 49.6275 0.0103754 0.980796 0 50.436 GTEX-UJMC-1326-SM-4IHLS 1 B1 6 pieces, ~6x3mm mucosa remarkably well-preserved, up to 500 microns thick 6.8 Colon Colon - Transverse 0001157 208 1025 BP-26180 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.986049 322879 0.96977 0.988226 0.786158 23222 1 76 0.00269003 156 0 6.88796e+07 0.0295986 978597 6.97003e+07 4.95298e+06 23252 3.42558e+07 0 0.183612 0.988226 0.776902 6.88796e+07 0.00346251 1.51871e+07 8.49884e+06 1.539e+07 168 1.53718e+07 9.17841e+06 0.00307542 1.53337e+07 49.938 0.0140401 0.990403 0 50.3317 GTEX-UJMC-1826-SM-3GADT 0 B1 2 pieces, ~10x6mm, minimal interstitial fat 7.9 Muscle Muscle - Skeletal 0011907 257 976 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.981751 342971 0.978122 0.986265 0.874611 20231 1 76 0.00255877 183 0 1.03626e+08 0.0215817 1.09366e+06 1.05069e+08 1.50218e+07 20244 5.14431e+07 0 0.103511 0.986265 0.862598 1.03626e+08 0.00969884 2.24322e+07 1.35858e+07 2.29492e+07 226 2.3095e+07 2.08828e+07 0.00611247 2.27086e+07 49.5783 0.010409 0.990779 0 50.5696 GTEX-UJMC-1926-SM-3GADS 0 B1 2 pieces, ~5mm d. Clean specimens, focal interstitial fat 6.9 Nerve Nerve - Tibial 0001323 261 972 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.588335 142231 0.965559 0.59275 0.748808 22843 1 76 0.00274076 138 0 5.32542e+07 0.0340977 135337 8.98426e+07 1.502e+07 22870 2.62673e+07 0 0.216751 0.59275 0.443856 5.32542e+07 0.00992544 1.15088e+07 5.51905e+06 1.17868e+07 130 1.19457e+07 7.82728e+06 0.00630634 1.17314e+07 49.5474 0.00150638 0.597166 0 50.5966 GTEX-UJMC-2026-SM-3GADR 0 B1 2 pieces ~5mm d., moderate atherosclerosis, evidence of dissection 7.3 Blood Vessel Artery - Tibial 0007610 253 980 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.757143 279954 0.973614 0.762935 0.800887 23570 1 76 0.00280581 171 0 9.99102e+07 0.0259008 248356 1.30955e+08 2.11105e+07 23602 4.93437e+07 0 0.172727 0.762935 0.611025 9.99102e+07 0.00973448 2.13418e+07 9.08712e+06 2.18354e+07 201 2.21428e+07 1.79654e+07 0.00624385 2.17565e+07 49.56 0.0018965 0.768726 0 50.5716 GTEX-UPIC-0002-SM-3NMDC B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -68 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 EXCLUDE 0.991173 1.17072e+06 0.962921 0.993445 0.823706 22378 1 76 0.0030696 225 0 1.03114e+08 0.0364492 657423 1.03794e+08 1.25343e+07 22421 5.12838e+07 0 0.139215 0.993445 0.818307 1.03114e+08 0.00434228 2.27349e+07 1.87847e+07 2.27645e+07 213 2.28378e+07 2.57584e+07 0.00370448 2.28928e+07 50.0601 0.00633391 0.995717 0 50.0326 GTEX-UPIC-0004-SM-3G3SB B1 Blood Whole Blood 0013756 -67 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array EXCLUDE 8222003099_R03C01 GTEX-UPIC-0004-SM-3G3TC B1 Blood Whole Blood 0013756 -67 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R01C02 GTEX-UPIC-0004-SM-4X615 B1 Blood Whole Blood 0013756 -67 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-UPIC-0004-SM-5SOEF B1 Blood Whole Blood 0013756 -67 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 LCSET-5226,LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-UPIC-0005-SM-3GACV B1 8 Blood Whole Blood 0013756 -69 BP-24792 RNA isolation_PAXgene Blood RNA (Manual) 04/30/2012 LCSET-2014 09/08/2012 TruSeq.v1 EXCLUDE 0.976845 509275 0.963775 0.981194 0.803234 18738 1 76 0.00289254 125 0 7.24047e+07 0.0354443 362859 7.37924e+07 1.019e+07 18753 3.593e+07 0 0.160541 0.981194 0.788128 7.24047e+07 0.0104284 1.60295e+07 5.36412e+07 1.63785e+07 139 1.64808e+07 1.56514e+07 0.00664376 1.62431e+07 49.6369 0.00491729 0.985542 0 50.5385 GTEX-UPIC-0226-SM-3GADO 1 B1 2 pieces, 8x8 & 9x8mm 6.4 Thyroid Thyroid 0002046 211 663 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-2014 09/08/2012 TruSeq.v1 EXCLUDE 0.392861 57506 0.963354 0.399478 0.764003 21017 1 76 0.00266158 112 0 2.69264e+07 0.0362392 308758 6.7404e+07 1.30934e+07 21029 1.31368e+07 0 0.199352 0.399478 0.305202 2.69264e+07 0.0109672 5.7218e+06 3.85666e+06 5.89485e+06 116 6.092e+06 4.12428e+06 0.00674561 5.95787e+06 49.4434 0.00458071 0.406095 0 50.7448 GTEX-UPIC-0326-SM-4IHJ9 0 B1 2 pieces, 7x4 & 3.5x3mm; 40 and 60% adjacent adipose 5.7 Blood Vessel Artery - Coronary 0001621 215 660 BP-26178 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.988811 339568 0.97163 0.990832 0.826352 21820 1 76 0.00226586 165 0 7.22303e+07 0.0280627 1.19695e+06 7.28986e+07 5.2583e+06 21843 3.5945e+07 0 0.145277 0.990832 0.818776 7.22303e+07 0.00304343 1.54585e+07 6.26002e+06 1.56987e+07 179 1.56975e+07 1.2253e+07 0.00265385 1.55988e+07 49.8423 0.0164194 0.992853 0 50.3855 GTEX-UPIC-0526-SM-4WWCQ 0 B1 6 pieces, up to 10mmx807um; focal periadventitial adipose 5.9 Blood Vessel Artery - Aorta 0001496 220 656 BP-26180 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.990099 329010 0.975178 0.992827 0.844642 21663 1 76 0.00246862 159 0 7.50609e+07 0.0245129 626170 7.56031e+07 6.45361e+06 21676 3.73321e+07 0 0.130536 0.992827 0.838583 7.50609e+07 0.00316577 1.61174e+07 6.80791e+06 1.61689e+07 179 1.61494e+07 1.41723e+07 0.00281623 1.63415e+07 50.2956 0.00828233 0.995556 0 50.0798 GTEX-UPIC-0626-SM-4IHK2 0 B1 6 pieces, up to 8x4mm; good muscle and neural tissue 7.7 Esophagus Esophagus - Muscularis 0004648 221 655 BP-26180 RNA isolation_PAXgene Tissue miRNA 06/12/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.989908 421102 0.975461 0.991789 0.825552 22839 1 76 0.00234051 274 0 9.26423e+07 0.0242688 1.75858e+06 9.34092e+07 6.41908e+06 22866 4.61174e+07 0 0.149909 0.991789 0.818773 9.26423e+07 0.00306567 2.00857e+07 8.33129e+06 2.03512e+07 281 2.03622e+07 1.38505e+07 0.0027024 2.02351e+07 49.8435 0.0188267 0.993671 0 50.3283 GTEX-UPIC-0726-SM-3GADW 1 B1 2 pieces, 9x8 & 9x7mm; very well preserved; lots of islets; 40-50% adjacent adipose 6.8 Pancreas Pancreas 0001150 223 654 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 EXCLUDE 0.981595 1.13691e+06 0.967011 0.986207 0.788377 24063 1 76 0.00285286 188 0 1.64922e+08 0.032475 1.60621e+06 1.67229e+08 2.38245e+07 24120 8.18119e+07 0 0.178634 0.986207 0.777503 1.64922e+08 0.00977622 3.7198e+07 5.01819e+07 3.7899e+07 228 3.79855e+07 4.08964e+07 0.00629835 3.78718e+07 49.9251 0.00960485 0.990819 0 50.4668 GTEX-UPIC-0826-SM-3GADQ 1 B1 2 pieces, 10x6.5 & 7x6mm; patchy interstitial fibrosis and pneumonitis 7.7 Lung Lung 0008952 225 652 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 EXCLUDE 0.97848 401653 0.968932 0.98302 0.771538 24979 1 76 0.00273553 157 0 9.20224e+07 0.0307421 826642 9.36119e+07 1.33993e+07 25025 4.56619e+07 0 0.197394 0.98302 0.758437 9.20224e+07 0.00953947 2.01279e+07 9.9175e+06 2.05154e+07 194 2.06125e+07 1.43382e+07 0.00612179 2.0429e+07 49.7765 0.00883052 0.987559 0 50.4767 GTEX-UPIC-0926-SM-4IHLV 1 B1 2 pieces, 8x8 & 8x7mm; no steatosis, no fibrosis 6.7 Liver Liver 0001114 226 652 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.989457 358111 0.977417 0.991275 0.822046 20909 1 76 0.00218288 131 0 6.80125e+07 0.0221312 1.22775e+06 6.86111e+07 4.62330e+06 20932 3.385e+07 0 0.155371 0.991275 0.814873 6.80125e+07 0.0028657 1.49008e+07 6.98999e+06 1.50838e+07 155 1.50945e+07 1.22716e+07 0.00252366 1.50027e+07 49.8476 0.0178943 0.993093 0 50.3052 GTEX-UPIC-1026-SM-4IHLT 1 B1 6 pieces, up to 5.5x2.5mm; mild chronic inflammation (correlates with history of gastric reflux) 9.5 Esophagus Esophagus - Mucosa 0006920 230 648 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.989721 449646 0.974618 0.991611 0.817748 22645 1 76 0.00230742 146 0 7.24964e+07 0.02497 703698 7.31097e+07 5.17025e+06 22664 3.60814e+07 0 0.156869 0.991611 0.810888 7.24964e+07 0.00300787 1.61931e+07 8.52059e+06 1.63725e+07 163 1.64309e+07 1.43375e+07 0.00265698 1.62644e+07 49.7454 0.00962524 0.993501 0 50.2754 GTEX-UPIC-1126-SM-4IHLO 1 B1 6 pieces, up to 9x3mm; good preservation; no renal lesions 7.4 Kidney Kidney - Cortex 0001225 236 643 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.989995 315833 0.971363 0.992015 0.802236 22948 1 76 0.00242069 116 0 5.638e+07 0.0284312 2.65939e+06 5.68338e+07 3.92921e+06 22966 2.80576e+07 0 0.169127 0.992015 0.79583 5.638e+07 0.00320537 1.24059e+07 5.35451e+06 1.25961e+07 140 1.25859e+07 7.32815e+06 0.00281223 1.25205e+07 49.8698 0.0467924 0.994035 0 50.3803 GTEX-UPIC-1426-SM-4IHLQ 0 B1 6 pieces, up to 9x5mm; all have epithelium 7.3 Vagina Vagina 0000996 243 637 BP-29546 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.986759 350850 0.966432 0.988912 0.726574 23419 1 76 0.00240937 122 0 6.28138e+07 0.0333705 666880 6.3518e+07 4.62218e+06 23453 3.12416e+07 0 0.239858 0.988912 0.718518 6.28138e+07 0.00324694 1.39009e+07 7.24815e+06 1.40347e+07 137 1.40699e+07 8.90291e+06 0.00282724 1.39986e+07 49.8729 0.0104991 0.991065 0 50.2395 GTEX-UPIC-1526-SM-4IHLU 1 B1 2 pieces, 10x8 & 8.5x8mm; one has thin endometrium, other has no endometrium on this cut 7.6 Uterus Uterus 0000995 245 636 BP-29989 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.986693 438600 0.968573 0.98895 0.80661 22375 1 76 0.00216992 145 0 6.63052e+07 0.0311134 572336 6.7046e+07 4.7845e+06 22391 3.29688e+07 0 0.161963 0.98895 0.797697 6.63052e+07 0.00302949 1.44381e+07 7.5206e+06 1.45929e+07 157 1.46052e+07 1.13648e+07 0.00259872 1.45751e+07 49.9483 0.00853647 0.991207 0 50.2666 GTEX-UPIC-1626-SM-4IHKT 0 B1 6 pieces, up to 8x3mm; most subcutaneous adipose removed; keratin layer looks thicker than usual 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 247 634 BP-30376 RNA isolation_PAXgene Tissue miRNA 08/30/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.986451 641646 0.966128 0.988618 0.794728 23994 1 76 0.0022688 225 0 8.45387e+07 0.0336866 866006 8.5512e+07 6.3333e+06 24015 4.2047e+07 0 0.1714 0.988618 0.785682 8.45387e+07 0.00312697 1.8338e+07 1.19376e+07 1.85367e+07 217 1.85472e+07 1.31753e+07 0.00269694 1.85106e+07 49.9507 0.0101273 0.990785 0 50.2694 GTEX-UPIC-1726-SM-4IHKG 1 B1 6 pieces, up to 6x3mm; all have full thickness with good mucosa 8.4 Colon Colon - Transverse 0001157 251 631 BP-30376 RNA isolation_PAXgene Tissue miRNA 08/30/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.986675 337105 0.970208 0.988805 0.785171 23521 1 76 0.003069 134 0 6.44677e+07 0.0270129 1.43728e+06 6.51976e+07 4.75343e+06 23553 3.19945e+07 0 0.185037 0.988805 0.776381 6.44677e+07 0.0037461 1.43421e+07 8.95536e+06 1.44362e+07 146 1.45087e+07 9.5688e+06 0.00340682 1.43934e+07 49.8006 0.022045 0.990935 0 50.1635 GTEX-UPIC-1826-SM-4IHKC 1 B1 6 pieces, up to 9.5x4mm; 3 are full thickness, other 3 are muscularis only with adjacent submucosal adipose 8.1 Stomach Stomach 0000945 253 629 BP-30376 RNA isolation_PAXgene Tissue miRNA 08/30/2012 LCSET-3596 07/23/2013 TruSeq.v1 EXCLUDE 0.989451 660580 0.970755 0.991905 0.81022 23364 1 76 0.00222432 276 0 9.45774e+07 0.0289695 1.48323e+06 9.53492e+07 6.70143e+06 23392 4.70528e+07 0 0.160534 0.991905 0.803662 9.45774e+07 0.0029902 2.04106e+07 1.07988e+07 2.06758e+07 281 2.07174e+07 1.59142e+07 0.00260632 2.05895e+07 49.8451 0.0155558 0.99436 0 50.3228 GTEX-UPJH-0001-SM-3NMDE C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 653 BP-31387 RNA isolation_Trizol Manual (Cell Pellet) 09/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991512 939310 0.968691 0.993661 0.844361 21568 1 76 0.00315422 226 0 1.09818e+08 0.0301793 583708 1.10519e+08 1.32721e+07 21601 5.46223e+07 0 0.12433 0.993661 0.839009 1.09818e+08 0.00442776 2.4316e+07 2.06746e+07 2.44763e+07 253 2.45616e+07 2.82011e+07 0.00378961 2.44636e+07 49.9001 0.00528153 0.99581 0 50.1642 GTEX-UPJH-0002-SM-3G3S2 C1 Blood Whole Blood 0013756 653 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003023_R01C01 GTEX-UPJH-0002-SM-3G3T3 C1 Blood Whole Blood 0013756 653 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R01C01 GTEX-UPJH-0002-SM-4X62B C1 Blood Whole Blood 0013756 653 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) EXCLUDE GTEX-UPJH-0002-SM-5SOE9 C1 Blood Whole Blood 0013756 653 BP-24804 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 04/30/2012 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-UPJH-0006-SM-3GACW C1 8 Blood Whole Blood 0013756 653 BP-24792 RNA isolation_PAXgene Blood RNA (Manual) 04/30/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.944188 335495 0.974879 0.948614 0.767844 20085 1 76 0.00296879 117 0 7.88401e+07 0.024088 292614 8.31108e+07 1.26411e+07 20102 3.9098e+07 0 0.207035 0.948614 0.728388 7.88401e+07 0.0102144 1.76952e+07 5.91722e+07 1.80699e+07 138 1.82011e+07 1.611e+07 0.00657471 1.79309e+07 49.626 0.00352077 0.953041 0 50.5238 GTEX-UPJH-0126-SM-4IHLL 2 C1 2 pieces ~7x6mm. Spermatogenesis present, poorly preserved 6.1 Testis Testis 0000473 764 1325 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.985452 618340 0.923293 0.987859 0.712145 33312 1 76 0.00245241 174 0 8.36832e+07 0.0764038 536557 8.47117e+07 6.34075e+06 33377 4.16085e+07 0 0.211148 0.987859 0.703499 8.36832e+07 0.00326632 1.72242e+07 1.31874e+07 1.74056e+07 168 1.75286e+07 1.32342e+07 0.00285837 1.72842e+07 49.649 0.00633392 0.990265 0 50.262 GTEX-UPJH-0226-SM-3GADV 1 C1 6 pieces ~7x2mm. Squamous epithelium is ~2-3% of thickness 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 795 1294 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.879572 254254 0.970002 0.88376 0.754605 23886 1 76 0.00274705 171 0 7.67675e+07 0.0297501 419850 8.68646e+07 1.34379e+07 23920 3.80417e+07 0 0.215397 0.88376 0.666889 7.67675e+07 0.00966812 1.66884e+07 1.00349e+07 1.69207e+07 160 1.70355e+07 1.20066e+07 0.00619119 1.69183e+07 49.8274 0.00483338 0.887948 0 50.3456 GTEX-UPJH-0326-SM-3GADU 1 C1 6 pieces ~7x2mm. Squamous epithelium is 2-3% thickness 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 799 1291 BP-26354 RNA isolation_PAXgene Tissue miRNA 06/18/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.963034 272086 0.970837 0.966986 0.7775 23823 1 76 0.00259984 184 0 8.61482e+07 0.0288536 423509 8.90894e+07 1.10406e+07 23866 4.27536e+07 0 0.193336 0.966986 0.751832 8.61482e+07 0.00904843 1.86404e+07 1.06438e+07 1.88759e+07 183 1.89606e+07 1.39803e+07 0.00581096 1.88826e+07 49.8969 0.00475375 0.970938 0 50.3138 GTEX-UPJH-0326-SM-CKJTF 1 C1 6 pieces ~7x2mm. Squamous epithelium is 2-3% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 799 1291 BP-26357 DNA Isolation from Tissue via QIAgen Spin Column 06/18/2012 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-UPJH-0526-SM-4IHK8 1 C1 2 pieces ~6x6mm, minimal interstitial fat 8.5 Muscle Muscle - Skeletal 0011907 828 1264 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.990479 425008 0.9818 0.992619 0.88275 18436 1 76 0.00219062 127 0 6.25753e+07 0.0179857 595178 6.30406e+07 4.51657e+06 18443 3.11465e+07 0 0.0990498 0.992619 0.876235 6.25753e+07 0.00283775 1.35633e+07 8.01463e+06 1.37029e+07 144 1.37348e+07 1.29888e+07 0.00251349 1.36487e+07 49.8427 0.00944119 0.99476 0 50.2561 GTEX-UPJH-0626-SM-4IHJN 1 C1 2 pieces ~3.5m d. Good clean specimens 8.3 Nerve Nerve - Tibial 0001323 833 1260 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.989822 487189 0.96255 0.991806 0.753522 24107 1 76 0.00233056 178 0 7.72528e+07 0.0371703 219894 7.7891e+07 5.30825e+06 24141 3.84461e+07 0 0.209028 0.991806 0.747348 7.72528e+07 0.00308777 1.68153e+07 1.02349e+07 1.69953e+07 174 1.70356e+07 1.22232e+07 0.00270841 1.69247e+07 49.8367 0.0028231 0.99379 0 50.2662 GTEX-UPJH-0726-SM-4IHJW 1 C1 2 pieces ~2.5mm d. Good clean specimens; Monckeberg's medial sclerosis present, foci encircled 8.7 Blood Vessel Artery - Tibial 0007610 832 1261 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.989118 583900 0.966398 0.991024 0.795725 23079 1 76 0.00229858 210 0 8.60302e+07 0.0332313 261489 8.68094e+07 6.03046e+06 23106 4.28066e+07 0 0.170673 0.991024 0.788582 8.60302e+07 0.00299282 1.83153e+07 1.05546e+07 1.85246e+07 224 1.85635e+07 1.54102e+07 0.00264503 1.84371e+07 49.8291 0.00301222 0.992929 0 50.284 GTEX-UPJH-0826-SM-4WKFD 2 C1 2 pieces ~7x7mm. Poorly preserved, moderate congestion, areas of emphysematous change noted 7.9 Lung Lung 0008952 928 1166 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990038 558617 0.970067 0.992368 0.739216 24223 1 76 0.00235927 208 0 9.3289e+07 0.029603 402150 9.40064e+07 6.85799e+06 24271 4.63732e+07 0 0.230851 0.992368 0.733575 9.3289e+07 0.00343826 2.0489e+07 1.2209e+07 2.0561e+07 219 2.05747e+07 1.3729e+07 0.0028975 2.06972e+07 50.1485 0.0042779 0.994698 0 50.0877 GTEX-UPJH-0926-SM-4IHKA 2 C1 6 pieces '8x1.5mm 6.1 Blood Vessel Artery - Aorta 0001496 932 1163 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.986596 425006 0.968518 0.98856 0.748692 22943 1 76 0.00255714 164 0 8.45588e+07 0.0310509 198976 8.55374e+07 6.04585e+06 22969 4.2044e+07 0 0.219826 0.98856 0.740127 8.45588e+07 0.00327789 1.81617e+07 9.57676e+06 1.83283e+07 190 1.83607e+07 1.34625e+07 0.0029168 1.82955e+07 49.9111 0.00232619 0.990524 0 50.2283 GTEX-UPJH-1026-SM-EAZB2 1 C1 6 pieces ~6x1.5mm. Squamous mucosa is 10-15% thickness, well-preserved 5.5 Esophagus Esophagus - Mucosa 0006920 935 1161 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.979498 301582 0.973083 0.980521 0.802044 22869 1 76 0.00210623 207 0 8.53386e+07 0.0266915 527519 8.70339e+07 6.47749e+06 22896 4.25013e+07 0 0.171038 0.980521 0.786421 8.53386e+07 0.00362224 1.90802e+07 1.05036e+07 1.92133e+07 218 1.9097e+07 1.36581e+07 0.00286344 1.92935e+07 50.2559 0.00606107 0.981545 0 50.1739 GTEX-UPK5-0002-SM-3G3SL C1 Blood Whole Blood 0013756 795 BP-24870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003012_R01C01 GTEX-UPK5-0002-SM-3G3TM C1 Blood Whole Blood 0013756 795 BP-24870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R03C02 GTEX-UPK5-0002-SM-4SVR1 C1 Blood Whole Blood 0013756 795 BP-24870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-UPK5-0002-SM-5SOE3 C1 Blood Whole Blood 0013756 795 BP-24870 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/01/2012 LCSET-5226,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-UPK5-0003-SM-3NMDI C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 795 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990211 2.02149e+06 0.949369 0.992384 0.77534 22359 1 76 0.00299815 182 0 9.97442e+07 0.0499264 815416 1.0051e+08 1.18397e+07 22400 4.96203e+07 0 0.17403 0.992384 0.769435 9.97442e+07 0.00435699 2.17075e+07 1.90615e+07 2.17462e+07 202 2.1824e+07 2.15471e+07 0.00367609 2.18443e+07 50.0232 0.00811281 0.994558 0 50.0445 GTEX-UPK5-0006-SM-3GAD8 C1 8.7 Blood Whole Blood 0013756 795 BP-24915 RNA isolation_PAXgene Blood RNA (Manual) 05/02/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.972675 546061 0.973964 0.977001 0.781536 20533 1 76 0.00268299 114 0 9.4605e+07 0.0249114 215142 9.6832e+07 1.33951e+07 20546 4.69163e+07 0 0.192428 0.977001 0.763562 9.4605e+07 0.00999672 2.15991e+07 9.94297e+07 2.21423e+07 142 2.22282e+07 2.14638e+07 0.00632366 2.19364e+07 49.6697 0.00222181 0.981328 0 50.6209 GTEX-UPK5-0008-SM-4IHJD C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 984 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.991675 546121 0.973108 0.993351 0.833905 21169 1 76 0.00192306 230 0 7.99483e+07 0.0264777 184009 8.04834e+07 5.35788e+06 21189 3.98106e+07 0 0.139203 0.993351 0.828361 7.99483e+07 0.002548 1.78171e+07 8.20092e+06 1.80142e+07 206 1.81046e+07 1.72072e+07 0.002235 1.78518e+07 49.6484 0.0022863 0.995027 0 50.2751 GTEX-UPK5-0126-SM-3GADM 2 C1 2 pieces, 4x3.5 & 5x4mm; 3mm arteries with up to 1.6 mm surrounding adipose 6.6 Blood Vessel Artery - Coronary 0001621 971 1078 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-2014 09/08/2012 TruSeq.v1 RNASEQ 0.971105 204990 0.96993 0.97646 0.799556 23185 1 76 0.00265273 145 0 7.74879e+07 0.0297638 259599 7.9356e+07 1.17546e+07 23214 3.83915e+07 0 0.170374 0.97646 0.780734 7.74879e+07 0.0101632 1.65278e+07 6.82519e+06 1.68852e+07 174 1.69863e+07 1.22645e+07 0.00638737 1.68149e+07 49.7464 0.00327132 0.981815 0 50.5347 GTEX-UPK5-0226-SM-3GAEV 1 C1 "2 pieces, 9x6 & 10x9mm; myofibers pale compared to other heart specimen; BSS notes ""mislabeled solution""" 7.2 Heart Heart - Atrial Appendage 0006631 974 1076 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.961484 349082 0.970423 0.963215 0.812139 23679 1 76 0.00186126 369 0 1.23578e+08 0.0293037 1.48358e+06 1.28298e+08 8.89349e+06 23714 6.14365e+07 0 0.158283 0.963215 0.782265 1.23578e+08 0.00738818 2.66059e+07 1.39796e+07 2.67887e+07 366 2.66888e+07 1.79861e+07 0.00461976 2.68953e+07 50.1927 0.0115636 0.964946 0 50.1712 GTEX-UPK5-0326-SM-3GAF3 1 C1 2 pieces, 8x7 & 8x7mm; no adipose 7 Heart Heart - Left Ventricle 0006566 976 1075 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-2015 09/12/2012 TruSeq.v1 EXCLUDE 0.300672 33187 0.975157 0.30544 0.830477 18202 1 76 0.00222246 115 0 1.74405e+07 0.0246515 238519 5.70996e+07 9.46876e+06 18206 8.40661e+06 0 0.144679 0.30544 0.253661 1.74405e+07 0.0111815 3.77880e+06 1.80231e+06 3.86502e+06 135 3.95868e+06 2.37283e+06 0.00663207 3.92834e+06 49.8076 0.00417724 0.310207 0 50.5639 GTEX-UPK5-0326-SM-5SI81 1 C1 2 pieces, 8x7 & 8x7mm; no adipose 7 Heart Heart - Left Ventricle 0006566 976 1075 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.98742 299385 0.97599 0.991047 0.836349 21876 1 76 0.00181664 262 0 8.47271e+07 0.0238313 1.36603e+06 8.54925e+07 7.95885e+06 21898 4.2107e+07 0 0.139641 0.991047 0.828861 8.47271e+07 0.00329555 1.87943e+07 1.17014e+07 1.87558e+07 263 1.87542e+07 1.24211e+07 0.00255339 1.90751e+07 50.4241 0.0159784 0.994674 0 49.9487 GTEX-UPK5-0326-SM-CYPR4 1 C1 2 pieces, 8x7 & 8x7mm; no adipose 7 Heart Heart - Left Ventricle 0006566 976 1075 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994338 493183 0.980307 0.995181 0.845416 22221 1 76 0.00196318 369 0 1.09791e+08 0.0195099 1.44616e+06 1.10323e+08 7.26581e+06 22250 5.47549e+07 0 0.134891 0.995181 0.841341 1.09791e+08 0.00249282 2.43994e+07 1.42619e+07 2.45247e+07 339 2.45539e+07 1.75796e+07 0.00222778 2.44602e+07 49.9044 0.0131085 0.996023 0 50.128 GTEX-UPK5-0426-SM-3GAEK 1 C1 6 pieces, up to 8x4mm; all except the smallest are free of subcutaneous adipose 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 978 1073 BP-26449 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.502082 72353 0.969198 0.503756 0.827855 22644 1 76 0.00199593 133 0 5.36107e+07 0.0304769 411191 1.06422e+08 1.25497e+07 22663 2.64678e+07 0 0.141343 0.503756 0.417037 5.36107e+07 0.00817581 1.16231e+07 5.23617e+06 1.18605e+07 144 1.18116e+07 8.37482e+06 0.0050756 1.18447e+07 50.07 0.00386378 0.50543 0 50.5055 GTEX-UPK5-0726-SM-4IHL7 1 C1 6 pieces, 7x3mm; largely free of subcutaneous adipose 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 983 1071 BP-26451 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-3596 07/19/2013 TruSeq.v1 EXCLUDE 0.987911 31581 0.977857 0.989542 0.844874 15920 1 76 0.00210371 148 0 6.601e+06 0.0216881 53118 6.67076e+06 472792 15922 3.28303e+06 0 0.132983 0.989542 0.836038 6.601e+06 0.0029324 1.46037e+06 1.90272e+06 1.47829e+06 122 1.48039e+06 1.33776e+06 0.00251738 1.46891e+06 49.8055 0.00796281 0.991173 0 50.305 GTEX-UPK5-1126-SM-3GAEJ 1 C1 2 pieces, 8x7 & 10x7.5mm; scattered hemorrhages; pleura present (avoid) 7.6 Lung Lung 0008952 994 1063 BP-26451 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.846196 324696 0.969065 0.848349 0.777171 24499 1 76 0.00213064 175 0 8.54976e+07 0.0306421 210421 1.00781e+08 8.13676e+06 24543 4.24188e+07 0 0.191893 0.848349 0.659313 8.54976e+07 0.00800555 1.87743e+07 1.07404e+07 1.90402e+07 204 1.89843e+07 1.40353e+07 0.00506064 1.90471e+07 50.0826 0.0020879 0.850502 0 50.3516 GTEX-UPK5-1226-SM-4IHL8 1 C1 6 pieces, up to 8x2mm; good specimen 7.3 Esophagus Esophagus - Mucosa 0006920 996 1061 BP-26451 RNA isolation_PAXgene Tissue miRNA 06/20/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.987118 518319 0.967896 0.989401 0.755369 23268 1 76 0.00220006 157 0 7.95993e+07 0.0318686 215126 8.0452e+07 5.4867e+06 23289 3.95894e+07 0 0.212527 0.989401 0.747363 7.95993e+07 0.00304512 1.76388e+07 1.07731e+07 1.7834e+07 172 1.78938e+07 1.34419e+07 0.00262161 1.77581e+07 49.8098 0.00267397 0.991683 0 50.2752 GTEX-UPK5-1326-SM-4IHLE 1 C1 6 pieces, up to 8x4mm; good specimen, minimal adipose 8.3 Esophagus Esophagus - Muscularis 0004648 998 1060 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.988323 604031 0.963754 0.990585 0.780694 23674 1 76 0.00219087 166 0 8.38151e+07 0.0359889 266259 8.46117e+07 6.12727e+06 23702 4.16899e+07 0 0.18306 0.990585 0.773344 8.38151e+07 0.00306482 1.79026e+07 1.07291e+07 1.81259e+07 198 1.81526e+07 1.39034e+07 0.00262684 1.80653e+07 49.8795 0.00314683 0.992847 0 50.3098 GTEX-UPK5-1426-SM-4JBHH 1 C1 2 pieces, 8x7 & 6x6mm; no fat, fibrosis or excess congestion 7.3 Liver Liver 0001114 1001 1058 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990783 525119 0.975859 0.992797 0.840869 21822 1 76 0.0020729 269 0 9.71496e+07 0.022958 866375 9.78545e+07 6.84234e+06 21839 4.83106e+07 0 0.13499 0.992797 0.834812 9.71496e+07 0.00269148 2.08613e+07 1.66492e+07 2.09013e+07 267 2.09503e+07 1.97216e+07 0.00238156 2.1003e+07 50.0629 0.00885371 0.994811 0 50.0478 GTEX-UPK5-1526-SM-4JBJA 1 C1 6 pieces, up to 9x1.5mm; minimal plaque; adipose ee adventitia 8.4 Blood Vessel Artery - Aorta 0001496 1003 1056 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.99203 529822 0.966758 0.993724 0.775894 22675 1 76 0.00204473 142 0 7.02058e+07 0.0328772 96475 7.06492e+07 4.68499e+06 22702 3.4928e+07 0 0.190864 0.993724 0.771025 7.02058e+07 0.00276383 1.50782e+07 8.05067e+06 1.51536e+07 158 1.51738e+07 1.185e+07 0.00240367 1.51805e+07 50.011 0.00136555 0.995418 0 50.1247 GTEX-UPK5-1626-SM-4JBHI 1 C1 2 pieces, 8.5x7 & 9x8mm; moderate congestion 7.1 Spleen Spleen 0002106 1005 1055 BP-29992 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.980338 531178 0.952811 0.982769 0.73057 24160 1 76 0.0031641 128 0 6.90681e+07 0.04432 190575 7.02790e+07 5.15322e+06 24189 3.42193e+07 0 0.222241 0.982769 0.717981 6.90681e+07 0.00409682 1.51294e+07 1.99818e+07 1.51967e+07 148 1.52676e+07 9.23274e+06 0.00362931 1.52329e+07 49.9431 0.00271169 0.9852 0 50.1108 GTEX-UPK5-1826-SM-3GAEB 0 C1 2 pieces, 10x7 & 9x7mm; well fixed, no artifacts 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1009 1052 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.649266 109864 0.972838 0.651541 0.801045 22845 1 76 0.00207518 127 0 5.73383e+07 0.0268191 195046 8.80042e+07 9.61864e+06 22866 2.84077e+07 0 0.171793 0.651541 0.521914 5.73383e+07 0.00781206 1.25816e+07 5.21903e+06 1.27087e+07 137 1.27398e+07 9.57784e+06 0.0049336 1.27474e+07 50.0151 0.00221633 0.653817 0 50.2514 GTEX-UPK5-2026-SM-4JBIM 1 C1 6 pieces, up to 10x3mm; 3 pieces have good lymphoid tissue and some muscularis; 3 pieces have only muscularis; mucosa largely sloughed 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 1015 1047 BP-30218 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990673 468438 0.96 0.992402 0.70821 24488 1 76 0.00227096 141 0 7.31786e+07 0.0396568 94821 7.37389e+07 5.29311e+06 24525 3.64013e+07 0 0.25179 0.992402 0.702828 7.31786e+07 0.00307022 1.601e+07 9.64765e+06 1.60778e+07 155 1.61114e+07 1.05799e+07 0.00266989 1.61036e+07 49.9879 0.0012859 0.99413 0 50.1057 GTEX-UPK5-2126-SM-4JBJK 2 C1 6 pieces, up to 9x2mm; mucosa moderately autolyzed 6 Stomach Stomach 0000945 1017 1046 BP-30218 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.98943 452684 0.968491 0.991213 0.81155 23884 1 76 0.00199791 205 0 8.27344e+07 0.0312925 427113 8.34678e+07 6.00989e+06 23912 4.11605e+07 0 0.156941 0.991213 0.80442 8.27344e+07 0.00281099 1.8034e+07 9.50422e+06 1.82551e+07 227 1.82037e+07 1.23889e+07 0.00240372 1.82362e+07 50.0446 0.0051171 0.992997 0 50.3047 GTEX-UPK5-2326-SM-3P5Z8 1 C1 2 pieces, 10x9 & 10x10mm; larger has ducts in fibrous tissue; both 90% adipose 7.2 Breast Breast - Mammary Tissue 0008367 1023 1041 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951227 273652 0.967825 0.97298 0.769254 26230 1 76 0.00308088 281 0 1.22234e+08 0.0318791 362959 1.25629e+08 1.62621e+07 26299 5.95987e+07 0 0.198571 0.97298 0.748468 1.22234e+08 0.00443969 2.63302e+07 1.31658e+07 2.63466e+07 326 2.74738e+07 1.97705e+07 0.0037451 2.76358e+07 50.147 0.00288914 0.994732 0 50.0156 GTEX-UTHO-0003-SM-3G3SP C1 Blood Whole Blood 0013756 321 BP-24963 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/03/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003012_R02C01 GTEX-UTHO-0003-SM-3G3TQ C1 Blood Whole Blood 0013756 321 BP-24963 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/03/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R04C02 GTEX-UTHO-0003-SM-4X62R C1 Blood Whole Blood 0013756 321 BP-24963 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/03/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) EXCLUDE GTEX-UTHO-0003-SM-5SOE4 C1 Blood Whole Blood 0013756 321 BP-24963 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/03/2012 LCSET-5226 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-UTHO-0006-SM-3NMCC C1 8.9 Blood Whole Blood 0013756 321 BP-25034 RNA isolation_PAXgene Blood RNA (Manual) 05/07/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.987142 776305 0.964987 0.989657 0.75281 20355 1 76 0.00329695 149 0 9.65275e+07 0.0340696 227051 9.75363e+07 1.19271e+07 20377 4.79803e+07 0 0.212177 0.989657 0.745024 9.65275e+07 0.00489872 2.15023e+07 7.41125e+07 2.17386e+07 173 2.18112e+07 1.87975e+07 0.0040958 2.1682e+07 49.8514 0.00232786 0.992172 0 50.2732 GTEX-UTHO-0008-SM-4JBID C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 431 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.991747 716880 0.970581 0.99388 0.852734 19986 1 76 0.00179183 141 0 6.67571e+07 0.0291319 329076 6.71681e+07 4.76203e+06 19999 3.32072e+07 0 0.117847 0.99388 0.847515 6.67571e+07 0.00245989 1.47049e+07 1.27333e+07 1.48892e+07 146 1.49206e+07 1.60684e+07 0.00212515 1.48268e+07 49.8425 0.00489929 0.996014 0 50.3114 GTEX-UTHO-0011-R10A-SM-3GIJQ C1, A1 6.3 Brain Brain - Frontal Cortex (BA9) 0009834 325 BP-27010 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.762448 119642 0.959929 0.764618 0.848281 21699 1 76 0.00264783 169 0 6.99104e+07 0.0398049 3.22526e+06 9.14318e+07 1.12439e+07 21709 3.46693e+07 0 0.111648 0.764618 0.648611 6.99104e+07 0.00751953 1.51094e+07 6.6859e+06 1.54561e+07 216 1.52473e+07 7.23527e+06 0.00507677 1.55034e+07 50.4164 0.035275 0.766787 0 50.5672 GTEX-UTHO-0011-R10a-SM-AHZNR C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 325 ChIP-Seq GTEX-UTHO-0011-R11A-SM-3GIJE C1, A1 6.2 Brain Brain - Cerebellar Hemisphere 0002037 325 BP-27010 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.956614 253880 0.950118 0.959726 0.74821 22829 1 76 0.00273464 167 0 7.44116e+07 0.0495034 1.51527e+06 7.75342e+07 5.65579e+06 22863 3.69096e+07 0 0.201908 0.959726 0.718077 7.44116e+07 0.00753259 1.60153e+07 8.62698e+06 1.62438e+07 199 1.62137e+07 8.34082e+06 0.00512583 1.62618e+07 50.0741 0.0195433 0.962839 0 50.3542 GTEX-UTHO-0011-R1A-SM-3GIJO C1, A1 7.1 Brain Brain - Hippocampus 0001954 325 BP-27008 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.93774 140920 0.968412 0.940244 0.833515 22778 1 76 0.00274921 201 0 7.9668e+07 0.0312976 5.32296e+06 8.47312e+07 6.37137e+06 22811 3.95743e+07 0 0.134897 0.940244 0.783707 7.9668e+07 0.00725136 1.76014e+07 8.20347e+06 1.80522e+07 232 1.79438e+07 8.20577e+06 0.00499429 1.79036e+07 49.9439 0.0628217 0.942749 0 50.6323 GTEX-UTHO-0011-R2A-SM-3GIKC C1, A1 7.2 Brain Brain - Substantia nigra 0002038 325 BP-27008 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.931571 107181 0.965448 0.934903 0.829567 22261 1 76 0.00274884 164 0 6.2253e+07 0.0342672 4.13027e+06 6.65876e+07 5.42841e+06 22282 3.08862e+07 0 0.135881 0.934903 0.775565 6.2253e+07 0.00779668 1.37627e+07 5.44341e+06 1.4048e+07 192 1.38651e+07 7.19719e+06 0.00526376 1.41558e+07 50.5186 0.0620276 0.938236 0 50.5129 GTEX-UTHO-0011-R3A-SM-3GIK8 C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 325 BP-27008 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.817827 241479 0.968573 0.82028 0.853869 22116 1 76 0.00275424 163 0 6.64999e+07 0.0310868 4.00043e+06 8.10698e+07 7.07248e+06 22131 3.29455e+07 0 0.114704 0.82028 0.700412 6.64999e+07 0.00756679 1.49597e+07 7.11393e+06 1.46217e+07 205 1.45416e+07 7.09352e+06 0.00515332 1.52157e+07 51.1326 0.0493455 0.822733 0 49.4286 GTEX-UTHO-0011-R4A-SM-3GIJP C1, A1 6.8 Brain Brain - Amygdala 0001876 325 BP-27008 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.772703 109271 0.969728 0.775714 0.8531 21793 1 76 0.00287296 160 0 6.371e+07 0.029991 4.60546e+06 8.21308e+07 9.4279e+06 21808 3.15945e+07 0 0.116628 0.775714 0.661761 6.371e+07 0.00743801 1.40601e+07 7.25844e+06 1.43461e+07 194 1.42266e+07 5.81524e+06 0.00514663 1.43948e+07 50.294 0.0560748 0.778725 0 50.5034 GTEX-UTHO-0011-R5A-SM-3GIJD C1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 325 BP-27008 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.395088 32418 0.963929 0.399875 0.839121 19669 1 76 0.00308745 115 0 1.87361e+07 0.0357368 984146 4.68549e+07 6.88674e+06 19674 9.17710e+06 0 0.124808 0.399875 0.335544 1.87361e+07 0.00869433 4.06793e+06 2.08572e+06 4.11765e+06 131 4.19372e+06 2.11082e+06 0.00585732 4.20781e+06 50.0838 0.0210041 0.404663 0 50.3037 GTEX-UTHO-0011-R6A-SM-3GIJW C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 325 BP-27010 RNA isolation_PAXgene Tissue miRNA 07/05/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.969836 197337 0.964279 0.972193 0.844442 23720 1 76 0.00262861 269 0 9.58911e+07 0.0353998 4.99804e+06 9.86338e+07 6.5842e+06 23745 4.76452e+07 0 0.119838 0.972193 0.82096 9.58911e+07 0.00712104 2.10404e+07 9.58404e+06 2.12121e+07 303 2.10682e+07 1.053e+07 0.00486938 2.13837e+07 50.3716 0.0506726 0.97455 0 50.2032 GTEX-UTHO-0426-SM-3GAED 1 C1 2 pieces, 7.5x5 & 10x9.5mm; 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 433 1414 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-2015 09/12/2012 TruSeq.v1 EXCLUDE 0.310565 46786 0.970666 0.311602 0.776907 20107 1 76 0.0022535 144 0 3.68474e+07 0.0288264 187682 1.18252e+08 1.46734e+07 20124 1.81888e+07 0 0.193759 0.311602 0.242086 3.68474e+07 0.00824618 7.98694e+06 3.31292e+06 8.1199e+06 155 8.11134e+06 5.75786e+06 0.00523986 8.11777e+06 50.0198 0.00158714 0.312639 0 50.4127 GTEX-UTHO-0426-SM-5SI7N 1 C1 2 pieces, 7.5x5 & 10x9.5mm; 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 433 1414 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.989249 221222 0.971366 0.99193 0.789492 23155 1 76 0.0020771 167 0 7.62661e+07 0.0283409 374880 7.68866e+07 7.78189e+06 23180 3.79341e+07 0 0.181874 0.99193 0.783121 7.62661e+07 0.00330189 1.66272e+07 7.60589e+06 1.67565e+07 183 1.67492e+07 1.24775e+07 0.00268784 1.68333e+07 50.1253 0.00487575 0.994611 0 50.1937 GTEX-UTHO-0426-SM-CE6QU 1 C1 2 pieces, 7.5x5 & 10x9.5mm; 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 433 1414 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-9106 06/02/2016 TruSeq.v1 RNASEQ 0.98679 692941 0.972523 0.988184 0.79684 24913 1 76 0.00806492 220 0 1.22222e+08 0.027176 591008 1.23684e+08 2.07763e+07 24953 6.07647e+07 0 0.175683 0.988184 0.787425 1.22222e+08 0.00771205 2.67119e+07 1.29903e+07 2.68456e+07 255 2.69236e+07 2.10198e+07 0.00788873 2.68059e+07 49.8905 0.00477838 0.989578 0 50.1248 GTEX-UTHO-0726-SM-3GAEN 1 C1 2 pieces, 9x8 & 10x9mm; 8.1 Muscle Muscle - Skeletal 0011907 446 1403 BP-26621 RNA isolation_PAXgene Tissue miRNA 06/25/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.828842 132103 0.975896 0.830994 0.840453 21263 1 76 0.00200639 154 0 7.97436e+07 0.0238447 1.11483e+06 9.59617e+07 8.19844e+06 21279 3.95952e+07 0 0.135443 0.830994 0.698412 7.97436e+07 0.00765091 1.7089e+07 7.15156e+06 1.72899e+07 181 1.72738e+07 1.49999e+07 0.00482134 1.72858e+07 50.0174 0.0116175 0.833146 0 50.2922 GTEX-UTHO-1026-SM-3GAF7 1 C1 2 pieces, 9x7 & 9x6mm; all fibroadipose, no mammary ducts 7.2 Breast Breast - Mammary Tissue 0008367 453 1398 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.931113 340913 0.972508 0.932736 0.797269 23859 1 76 0.00213509 375 0 1.34998e+08 0.0271738 1.55742e+06 1.44734e+08 1.05576e+07 23908 6.70586e+07 0 0.175238 0.932736 0.743642 1.34998e+08 0.00750884 2.95256e+07 1.50497e+07 2.99238e+07 388 2.98017e+07 2.11157e+07 0.00481729 2.98742e+07 50.0607 0.0107606 0.934358 0 50.3349 GTEX-UTHO-1226-SM-3GAEE 1 C1 2 pieces, 7.5x7 & 7x7mm; interstitial fibrosis; thrombi and clots in lumen 6.7 Heart Heart - Atrial Appendage 0006631 461 1391 BP-26660 RNA isolation_PAXgene Tissue miRNA 06/26/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.510366 47587 0.979613 0.514969 0.81283 19700 1 76 0.00243148 128 0 3.17671e+07 0.0199441 780078 6.16874e+07 7.7886e+06 19705 1.56145e+07 0 0.166782 0.514969 0.418582 3.17671e+07 0.00903952 6.9266e+06 3.12337e+06 7.05373e+06 142 7.14866e+06 4.55217e+06 0.00570596 7.10640e+06 49.8518 0.0126457 0.519572 0 50.4547 GTEX-UTHO-1826-SM-3GAFE 1 C1 2 pieces, 10x8 & 10x7mm; 6.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 467 1390 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.952771 352616 0.970705 0.955535 0.799674 22408 1 76 0.00224011 203 0 9.55011e+07 0.0289709 986192 9.99451e+07 7.18689e+06 22447 4.73684e+07 0 0.171031 0.955535 0.764117 9.55011e+07 0.00797163 2.08818e+07 1.41251e+07 2.11088e+07 236 2.10457e+07 1.52399e+07 0.00509758 2.12145e+07 50.1996 0.00986734 0.9583 0 50.2702 GTEX-UTHO-2426-SM-4JBHD 2 C1 2 pieces, 8x7.5 & 7x7mm; moderate congestion; some portal fibrosis 9.3 Liver Liver 0001114 489 1372 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.988902 405077 0.969454 0.99061 0.811694 22220 1 76 0.00224126 139 0 6.64084e+07 0.0302141 1.07478e+06 6.70379e+07 4.84585e+06 22242 3.30338e+07 0 0.157761 0.99061 0.804072 6.64084e+07 0.00298889 1.45284e+07 1.0428e+07 1.46109e+07 161 1.4624e+07 1.06344e+07 0.00261443 1.46338e+07 50.0168 0.0160324 0.992319 0 50.1417 GTEX-UTHO-2426-SM-CKJTI 2 C1 2 pieces, 8x7.5 & 7x7mm; moderate congestion; some portal fibrosis Liver Liver 0001114 489 1372 BP-26702 DNA Isolation from Tissue via QIAgen Spin Column 06/27/2012 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-UTHO-2726-SM-4JBH9 2 C1 2 pieces, 8x6 & 8x8mm; glands largely autolyzed; muscle appears preserved 7.5 Prostate Prostate 0002367 494 1369 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.98484 372516 0.957926 0.987006 0.747682 25032 1 76 0.00233162 166 0 7.63927e+07 0.0418263 1.34582e+06 7.73984e+07 5.81871e+06 25071 3.7991e+07 0 0.210245 0.987006 0.737967 7.63927e+07 0.00315824 1.66637e+07 1.26027e+07 1.68189e+07 185 1.68138e+07 9.80322e+06 0.00274402 1.68406e+07 50.0399 0.0173883 0.989173 0 50.2318 GTEX-UTHO-2926-SM-3P5Z9 2 C1 4 pieces, up to 6x4mm; 8.9 Brain Brain - Cerebellum 0002037 499 1366 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951206 755071 0.942326 0.972436 0.709108 25219 1 76 0.00353088 271 0 1.1322e+08 0.0572794 1.4245e+06 1.16429e+08 1.53277e+07 25267 5.52228e+07 0 0.233219 0.972436 0.689562 1.1322e+08 0.00472112 2.39539e+07 2.66041e+07 2.3954e+07 278 2.50056e+07 1.40972e+07 0.00411301 2.50524e+07 50.0467 0.0122349 0.993666 0 50.0001 GTEX-UTHO-3026-SM-3GAFB 2 C1 4 pieces, up to 5x2.5mm; 8.7 Brain Brain - Cortex 0001870 502 1363 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.951257 742094 0.958433 0.953094 0.802667 26335 1 76 0.00227589 519 0 1.65523e+08 0.0411976 6.39831e+06 1.73669e+08 1.19057e+07 26395 8.21959e+07 0 0.155767 0.953094 0.765017 1.65523e+08 0.00753685 3.61398e+07 2.41957e+07 3.65713e+07 535 3.63505e+07 1.7668e+07 0.0049013 3.66195e+07 50.1843 0.036842 0.95493 0 50.2967 GTEX-UTHO-3026-SM-CYKVK 2 C1 4 pieces, up to 5x2.5mm; 8.7 Brain Brain - Cortex 0001870 502 1363 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 RIP-Seq GTEX-UTHO-3126-SM-3P5ZB 2 C1 1 piece, 14x7mm; ~10% is posterior pituitary 7.2 Pituitary Pituitary 0000007 504 1362 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951029 1.18329e+06 0.944265 0.97283 0.738609 25639 1 76 0.00319506 163 0 9.30487e+07 0.0554008 343218 9.56475e+07 1.21369e+07 25684 4.53526e+07 0 0.205656 0.97283 0.718541 9.30487e+07 0.00475589 1.91042e+07 3.52671e+07 1.9084e+07 182 1.99122e+07 1.54072e+07 0.00395799 2.00818e+07 50.2121 0.00358836 0.99463 0 49.9735 GTEX-V1D1-0001-SM-3G3SG B1 Blood Whole Blood 0013756 -37 BP-25044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003099_R04C01 GTEX-V1D1-0001-SM-3G3TH B1 Blood Whole Blood 0013756 -37 BP-25044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R02C02 GTEX-V1D1-0001-SM-4X62Q B1 Blood Whole Blood 0013756 -37 BP-25044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-V1D1-0001-SM-5SOE2 B1 Blood Whole Blood 0013756 -37 BP-25044 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/07/2012 LCSET-5226,LCSET-5432 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-V1D1-0003-SM-3NMDP B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -37 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992141 1.4673e+06 0.962573 0.993956 0.804282 23176 1 76 0.00310565 288 0 1.24572e+08 0.0367337 826771 1.25329e+08 1.36006e+07 23220 6.20184e+07 0 0.158291 0.993956 0.799421 1.24572e+08 0.00427019 2.74826e+07 2.26981e+07 2.76564e+07 314 2.77538e+07 2.89407e+07 0.00368686 2.76060e+07 49.8666 0.0065968 0.995771 0 50.1576 GTEX-V1D1-0006-SM-3NMCE B1 8.1 Blood Whole Blood 0013756 -38 BP-25034 RNA isolation_PAXgene Blood RNA (Manual) 05/07/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991937 1.2827e+06 0.953738 0.993853 0.813088 21434 1 76 0.00325685 278 0 1.28201e+08 0.0455004 562332 1.28993e+08 1.50491e+07 21455 6.38213e+07 0 0.14065 0.993853 0.80809 1.28201e+08 0.00468908 2.79325e+07 6.44436e+07 2.81494e+07 316 2.82181e+07 2.63325e+07 0.00397159 2.81161e+07 49.9095 0.00435938 0.995769 0 50.1933 GTEX-V1D1-0008-SM-4JBIJ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 475 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.99171 869912 0.977416 0.994057 0.879249 19925 1 76 0.00171913 209 0 8.63549e+07 0.022312 177883 8.68712e+07 6.19362e+06 19937 4.29627e+07 0 0.098167 0.994057 0.874024 8.63549e+07 0.00243504 1.90913e+07 1.31703e+07 1.92991e+07 210 1.93643e+07 2.13565e+07 0.00207624 1.92276e+07 49.8229 0.00204766 0.996404 0 50.2706 GTEX-V1D1-0226-SM-4JBHG 2 B1 2 pieces ~8x5mm, all cortex, one has adherent 1.5mm nubbin of fat, otherwise clean but not well preserved 7.4 Adrenal Gland Adrenal Gland 0002369 312 1181 BP-26673 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.992082 337516 0.976894 0.993725 0.806934 22053 1 76 0.00226356 268 0 8.11334e+07 0.0228869 1.90553e+06 8.16457e+07 5.50302e+06 22076 4.0409e+07 0 0.16996 0.993725 0.801871 8.11334e+07 0.00290361 1.78279e+07 1.27336e+07 1.80228e+07 257 1.80028e+07 9.60973e+06 0.00258306 1.79634e+07 49.9452 0.023339 0.995368 0 50.2718 GTEX-V1D1-0326-SM-4JBIY 1 B1 6 pieces ~8x1.5mm. Mild patchy atherosis 6.8 Blood Vessel Artery - Aorta 0001496 320 1174 BP-26673 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.991756 378696 0.972753 0.993601 0.803692 22935 1 76 0.00215113 154 0 7.35592e+07 0.0268967 251738 7.4033e+07 5.05479e+06 22956 3.6612e+07 0 0.169061 0.993601 0.798549 7.35592e+07 0.00298106 1.60354e+07 6.61532e+06 1.61363e+07 173 1.61334e+07 1.25857e+07 0.00256532 1.61716e+07 50.0591 0.00340035 0.995445 0 50.1569 GTEX-V1D1-0526-SM-4JBGW 1 B1 2 pieces ?ventricle 6x6 mm, no significant ischemic changes 6.1 Heart Heart - Left Ventricle 0006566 334 1162 BP-26862 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990234 431898 0.982147 0.99251 0.842547 21082 1 76 0.00222666 367 0 8.68952e+07 0.0177046 1.97670e+06 8.7551e+07 6.36815e+06 21103 4.32331e+07 0 0.139599 0.99251 0.836237 8.68952e+07 0.00305145 1.89625e+07 1.55498e+07 1.93005e+07 332 1.91168e+07 1.02489e+07 0.00263811 1.93019e+07 50.2409 0.0225778 0.994786 0 50.4416 GTEX-V1D1-0626-SM-4JBHN 1 B1 2 pieces ?atrial appendage? ~6x6mm 5.8 Heart Heart - Atrial Appendage 0006631 338 1159 BP-26862 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.987593 403876 0.975497 0.990115 0.820504 21816 1 76 0.00227451 176 0 6.86965e+07 0.0243559 1.90975e+06 6.93823e+07 4.90326e+06 21836 3.41409e+07 0 0.154993 0.990115 0.812393 6.86965e+07 0.00313994 1.49293e+07 1.06536e+07 1.5028e+07 205 1.48969e+07 7.26322e+06 0.00270612 1.52112e+07 50.5219 0.027525 0.992637 0 50.1647 GTEX-V1D1-0726-SM-4JBH7 1 B1 2 pieces ~8x6mm, interstitial fibrosis. Rare Islets seen, encircled. Fairly well preserved 6.5 Pancreas Pancreas 0001150 342 1156 BP-26699 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990059 610924 0.967285 0.992218 0.779236 23586 1 76 0.00230222 133 0 9.074e+07 0.0324346 421403 9.14517e+07 6.54159e+06 23623 4.51272e+07 0 0.188049 0.992218 0.773172 9.074e+07 0.00320062 2.03757e+07 2.19131e+07 2.05756e+07 155 2.05652e+07 2.02788e+07 0.00275044 2.05822e+07 50.0207 0.00460793 0.994376 0 50.2441 GTEX-V1D1-0826-SM-3P5ZA 3 B1 2 pieces ~8x5mm. Diffuse interstitial fibrosis, ? diffuse alveolar damage sequence, micro foci of acute inflammation encircled 6 Lung Lung 0008952 345 1154 BP-26699 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949557 309037 0.969874 0.9716 0.780415 25823 1 76 0.00352971 273 0 1.02885e+08 0.0297907 986418 1.05892e+08 1.44381e+07 25869 5.01344e+07 0 0.18946 0.9716 0.758251 1.02885e+08 0.00519589 2.22508e+07 1.3857e+07 2.23626e+07 272 2.32573e+07 1.4821e+07 0.0043439 2.34245e+07 50.1791 0.00931528 0.993642 0 50.1253 GTEX-V1D1-0926-SM-4JBHQ 1 B1 2 pieces ~8x4mm. Colloid nodules encircled 5.8 Thyroid Thyroid 0002046 350 1152 BP-26699 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.988334 429861 0.959036 0.990762 0.707642 24376 1 76 0.0022687 136 0 7.30151e+07 0.0407378 461760 7.36959e+07 5.40395e+06 24422 3.62997e+07 0 0.251394 0.990762 0.701105 7.30151e+07 0.00308961 1.58294e+07 7.62037e+06 1.592e+07 164 1.59575e+07 8.73775e+06 0.00267815 1.59602e+07 50.0043 0.00626575 0.993191 0 50.1427 GTEX-V1D1-1026-SM-4JBHE 1 B1 6 pieces ~6x1mm, Squamous mucosa is ~40-50% thickness 10 Esophagus Esophagus - Mucosa 0006920 362 1142 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.989464 760513 0.967287 0.991965 0.772787 22754 1 76 0.0022175 162 0 8.20392e+07 0.0323471 331767 8.27038e+07 6.1725e+06 22779 4.08025e+07 0 0.1945 0.991965 0.766578 8.20392e+07 0.00306632 1.82864e+07 1.69895e+07 1.8383e+07 174 1.84585e+07 1.498e+07 0.00264084 1.84241e+07 49.9533 0.00401151 0.994466 0 50.1318 GTEX-V1D1-1126-SM-4JBHT 1 B1 6 pieces ~6x3mm 8.7 Esophagus Esophagus - Muscularis 0004648 364 1141 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990397 745750 0.964482 0.992638 0.771933 23568 1 76 0.00212339 207 0 9.1311e+07 0.0353011 698216 9.19882e+07 6.40768e+06 23604 4.54126e+07 0 0.192549 0.992638 0.76625 9.1311e+07 0.00288524 1.96541e+07 1.4721e+07 1.97326e+07 239 1.97315e+07 1.34992e+07 0.00250345 1.9864e+07 50.1673 0.00759028 0.994879 0 50.0996 GTEX-V1D1-1226-SM-4JBI5 1 B1 6 pieces ~6x3mm, all muscle, clean specimens 9.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 370 1135 BP-26701 RNA isolation_PAXgene Tissue miRNA 06/27/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.987228 758241 0.963679 0.98937 0.778391 23152 1 76 0.00214837 162 0 7.86908e+07 0.0360519 513278 7.95363e+07 5.72187e+06 23185 3.91448e+07 0 0.185288 0.98937 0.770117 7.86908e+07 0.00304627 1.68513e+07 1.32727e+07 1.69828e+07 181 1.69882e+07 1.26776e+07 0.00259635 1.702e+07 50.0467 0.00645338 0.991512 0 50.1943 GTEX-V1D1-1726-SM-4JBHB 1 B1 6 pieces ~7x1.5mm nearly all mucosa and fairly well preserved-- mucosa is 75-100% of thickness 6.6 Stomach Stomach 0000945 400 1109 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.988074 359771 0.979644 0.990535 0.832507 22868 1 76 0.00226762 282 0 8.00564e+07 0.0201343 1.98996e+06 8.08213e+07 5.8553e+06 22891 3.97828e+07 0 0.147137 0.990535 0.824627 8.00564e+07 0.00329502 1.81611e+07 5.25349e+07 1.83482e+07 247 1.83342e+07 1.3968e+07 0.00278005 1.83619e+07 50.0378 0.0246217 0.992996 0 50.2563 GTEX-V1D1-1926-SM-4JBGX 2 B1 2 pieces ~7x6mm. Glandular hyperplasia, mucosa poorly preserved 6.7 Prostate Prostate 0002367 424 1086 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.989162 964182 0.934639 0.991122 0.736901 24475 1 76 0.0022731 189 0 8.28874e+07 0.0651123 874781 8.36299e+07 6.20519e+06 24507 4.12272e+07 0 0.197738 0.991122 0.730359 8.28874e+07 0.00312421 1.76598e+07 3.44609e+07 1.80322e+07 206 1.80328e+07 9.9414e+06 0.00269782 1.78403e+07 49.7316 0.0104601 0.993082 0 50.5217 GTEX-V1D1-2026-SM-3GAF4 1 B1 6 pieces ~6x3mm. Squmous epithelium is ~2% thickness; prominent sebacious glands encircled 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 427 1086 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.838606 126105 0.964267 0.840797 0.72623 23670 1 76 0.00228915 172 0 8.1981e+07 0.035502 563792 9.7504e+07 1.54461e+07 23725 4.06899e+07 0 0.238037 0.840797 0.610611 8.1981e+07 0.00786112 1.79019e+07 7.74608e+06 1.81903e+07 198 1.81039e+07 1.00114e+07 0.00506788 1.81946e+07 50.125 0.00578225 0.842987 0 50.3996 GTEX-V1D1-2126-SM-4JBH4 2 B1 2 pieces ~6x6mm. Spermatogenesis is present but poorly preserved 6.7 Testis Testis 0000473 432 1082 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.99047 581204 0.925597 0.99232 0.717078 33849 1 76 0.00209216 210 0 9.60681e+07 0.0740536 844698 9.68116e+07 6.52572e+06 33927 4.78107e+07 0 0.208519 0.99232 0.711571 9.60681e+07 0.00283594 1.99321e+07 1.2436e+07 2.00099e+07 203 2.00916e+07 1.5413e+07 0.00246335 2.00144e+07 49.9037 0.00872517 0.99417 0 50.0974 GTEX-V1D1-2226-SM-3NMAX 0 B1 6 pieces ~6x3mm. Squamous epithelium is ~1% thickness 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 472 1043 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.987507 398298 0.968281 0.990531 0.757985 25424 1 76 0.00407559 206 0 9.61289e+07 0.0314185 478818 9.70478e+07 2.0053e+07 25476 4.77399e+07 0 0.210296 0.990531 0.750807 9.61289e+07 0.00549363 2.09224e+07 1.24543e+07 2.10201e+07 207 2.10896e+07 1.4997e+07 0.00478245 2.11334e+07 50.0519 0.00493384 0.993555 0 50.1165 GTEX-V1D1-2426-SM-3GAER 0 B1 2 pieces ~6x6mm, interstitial fat is ~10-20% of specimens 8 Muscle Muscle - Skeletal 0011907 480 1037 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.964664 172771 0.97628 0.966647 0.845816 20637 1 76 0.00201761 175 0 8.17951e+07 0.0234798 1.04132e+06 8.46174e+07 5.99093e+06 20656 4.06586e+07 0 0.130464 0.966647 0.817605 8.17951e+07 0.00767026 1.7773e+07 6.92675e+06 1.80058e+07 217 1.78357e+07 1.3436e+07 0.00483814 1.80818e+07 50.3425 0.0123062 0.968629 0 50.3253 GTEX-V1D1-2626-SM-4JBJH 0 B1 2 pieces ~2mm d. Good clean specimen 6.5 Blood Vessel Artery - Tibial 0007610 483 1036 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.989982 574353 0.97238 0.99201 0.801715 21081 1 76 0.00213617 134 0 6.34834e+07 0.0272594 229028 6.39947e+07 4.64329e+06 21101 3.15449e+07 0 0.170666 0.99201 0.795309 6.34834e+07 0.00303328 1.35798e+07 4.83668e+06 1.36819e+07 148 1.36802e+07 1.1555e+07 0.00258381 1.371e+07 50.0543 0.00357886 0.994039 0 50.1873 GTEX-V955-0001-SM-3G3SX B1 Blood Whole Blood 0013756 -84 BP-25178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003012_R04C01 GTEX-V955-0001-SM-3G3TY B1 Blood Whole Blood 0013756 -84 BP-25178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R06C02 GTEX-V955-0001-SM-4X61T B1 Blood Whole Blood 0013756 -84 BP-25178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-V955-0001-SM-5SOEE B1 Blood Whole Blood 0013756 -84 BP-25178 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/09/2012 LCSET-5226,LCSET-5432 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-V955-0004-SM-3NMDH B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -84 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992332 1.13463e+06 0.962499 0.994134 0.802182 22876 1 76 0.00275156 281 0 1.15582e+08 0.0369776 622793 1.16264e+08 1.36743e+07 22911 5.75658e+07 0 0.160317 0.994134 0.797476 1.15582e+08 0.00385898 2.54873e+07 1.99274e+07 2.55747e+07 282 2.56611e+07 2.67657e+07 0.00330426 2.55995e+07 49.9399 0.00535673 0.995935 0 50.0857 GTEX-V955-0005-SM-3P5ZC B1 8.4 Blood Whole Blood 0013756 -84 BP-25314 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950365 826089 0.959671 0.972226 0.803411 19759 1 76 0.00332905 155 0 9.91236e+07 0.039832 335859 1.01955e+08 1.41166e+07 19770 4.83372e+07 0 0.156259 0.972226 0.781097 9.91236e+07 0.00502053 2.13952e+07 7.20945e+07 2.16255e+07 183 2.25779e+07 2.18324e+07 0.00415577 2.24617e+07 49.871 0.00329418 0.994088 0 50.2677 GTEX-V955-0126-SM-4JBH5 1 B1 6 pieces, 3 with ~8x4mm, 3 with cortex can medualla, encircled 8.1 Adrenal Gland Adrenal Gland 0002369 106 1345 BP-26862 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.9904 725439 0.973052 0.992618 0.83025 22113 1 76 0.00184693 162 0 7.44102e+07 0.0266778 972904 7.49636e+07 5.3404e+06 22131 3.70018e+07 0 0.142802 0.992618 0.824121 7.44102e+07 0.00265114 1.63644e+07 9.6587e+06 1.65034e+07 190 1.65278e+07 1.25708e+07 0.00224813 1.64993e+07 49.9567 0.0129783 0.994836 0 50.2115 GTEX-V955-0326-SM-4JBGV 1 B1 2 pieces ~12x8mm, extremely well preserved, Islets well seen, several encircled 6.2 Pancreas Pancreas 0001150 114 1337 BP-26862 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.987708 700742 0.965873 0.990704 0.808464 21856 1 76 0.00229372 111 0 7.20732e+07 0.0339742 267458 7.27495e+07 5.57155e+06 21875 3.58086e+07 0 0.157409 0.990704 0.800948 7.20732e+07 0.00333289 1.62581e+07 2.161e+07 1.64767e+07 123 1.65093e+07 1.78467e+07 0.00281174 1.645e+07 49.9101 0.00367642 0.993699 0 50.334 GTEX-V955-0426-SM-3GAEL 1 B1 2 pieces ~9x6mm. Incidental papillary carcinoma 1.7x1mm on one edge of one aliquot, encircled 6.6 Thyroid Thyroid 0002046 121 1330 BP-26862 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.979024 334605 0.967882 0.980588 0.769379 25184 1 76 0.00203699 375 0 1.37886e+08 0.0314776 806985 1.40616e+08 8.71897e+06 25259 6.8531e+07 0 0.198503 0.980588 0.754444 1.37886e+08 0.00722193 3.01495e+07 1.20311e+07 3.03692e+07 375 3.02617e+07 2.16438e+07 0.00462533 3.0465e+07 50.1674 0.00573894 0.982153 0 50.1814 GTEX-V955-0726-SM-3GAFG 1 B1 2 pieces ~8x7mm. Presumed left ventricle, contraction band ischemic changes noted, several encircled 8.4 Heart Heart - Left Ventricle 0006566 135 1316 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.849847 293755 0.9803 0.852638 0.831222 21664 1 76 0.00185438 268 0 1.04905e+08 0.0194937 3.57010e+06 1.23036e+08 1.01235e+07 21688 5.20453e+07 0 0.149078 0.852638 0.708731 1.04905e+08 0.0078649 2.27881e+07 2.18253e+07 2.30806e+07 329 2.26268e+07 1.3332e+07 0.0048498 2.34606e+07 50.9046 0.0290167 0.855429 0 50.3188 GTEX-V955-0826-SM-3GAF9 1 B1 2 pieces ~9x6mm, presumed atrium 8.8 Heart Heart - Atrial Appendage 0006631 139 1312 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 TruSeq.v1 EXCLUDE 0.0826089 20439 0.969577 0.0774726 0.819508 17848 1 76 0.00208136 106 0 1.45946e+07 0.0293242 343784 1.88384e+08 2.51712e+07 17851 6.6898e+06 0 0.150069 0.0774726 0.0634895 1.45946e+07 0.0163401 3.34268e+06 2.14701e+06 3.44811e+06 124 2.96739e+06 2.43522e+06 0.00968339 2.91992e+06 49.5968 0.00182491 0.0723363 0 50.7763 GTEX-V955-0826-SM-5SI82 1 B1 2 pieces ~9x6mm, presumed atrium 8.8 Heart Heart - Atrial Appendage 0006631 139 1312 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990646 259323 0.977877 0.993743 0.829799 21920 1 76 0.00174274 267 0 8.58219e+07 0.0218687 2.4788e+06 8.63623e+07 8.17098e+06 21941 4.27077e+07 0 0.148079 0.993743 0.824606 8.58219e+07 0.00287047 1.84854e+07 1.70794e+07 1.84166e+07 266 1.83764e+07 1.35827e+07 0.00230484 1.8755e+07 50.5097 0.0287024 0.99684 0 49.9067 GTEX-V955-0826-SM-CYPR5 1 B1 2 pieces ~9x6mm, presumed atrium 8.8 Heart Heart - Atrial Appendage 0006631 139 1312 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.994782 585533 0.978432 0.995603 0.838681 22721 1 76 0.00192949 269 0 1.12756e+08 0.0213064 3.28543e+06 1.13254e+08 8.19842e+06 22752 5.62274e+07 0 0.139751 0.995603 0.834994 1.12756e+08 0.00219215 2.43925e+07 1.65842e+07 2.45338e+07 325 2.44597e+07 1.84283e+07 0.00206071 2.45428e+07 50.0848 0.0290095 0.996425 0 50.1444 GTEX-V955-0926-SM-4JBJ8 1 B1 6 pieces ~10x2mm 5.8 Blood Vessel Artery - Aorta 0001496 142 1309 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990652 479934 0.972921 0.992471 0.805735 21782 1 76 0.00195588 186 0 8.03223e+07 0.0267399 445846 8.09316e+07 5.98639e+06 21803 3.99579e+07 0 0.167185 0.992471 0.799669 8.03223e+07 0.00273418 1.74591e+07 6.65102e+06 1.75691e+07 203 1.75513e+07 1.30609e+07 0.00234432 1.76217e+07 50.1001 0.00550892 0.994289 0 50.157 GTEX-V955-1026-SM-4JBHO 1 B1 6 pieces, ~10x3mm 8.4 Esophagus Esophagus - Muscularis 0004648 158 1293 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.991424 427486 0.973383 0.993349 0.81301 22268 1 76 0.00190755 168 0 7.51689e+07 0.0263886 470629 7.56721e+07 5.68946e+06 22292 3.74214e+07 0 0.160372 0.993349 0.807603 7.51689e+07 0.00268783 1.633e+07 7.08603e+06 1.64808e+07 185 1.64673e+07 1.28272e+07 0.00229694 1.64828e+07 50.0235 0.00621932 0.995275 0 50.2297 GTEX-V955-1126-SM-4JBH3 1 B1 7 pieces ~10x1mm. Squamous mucosa is 20-30% thickness 9.8 Esophagus Esophagus - Mucosa 0006920 162 1289 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990953 460841 0.974165 0.992839 0.811658 22661 1 76 0.00204185 170 0 7.8042e+07 0.0254792 353942 7.86049e+07 5.49998e+06 22687 3.88501e+07 0 0.162507 0.992839 0.805845 7.8042e+07 0.00277733 1.75226e+07 1.1134e+07 1.7686e+07 180 1.77262e+07 1.50681e+07 0.00240889 1.7624e+07 49.8555 0.0045028 0.994725 0 50.232 GTEX-V955-1226-SM-4JBI9 1 B1 6 pieces ~10x4mm. All muscle, good specimens 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 165 1286 BP-26864 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.991645 529740 0.972214 0.993696 0.807665 22147 1 76 0.00190109 164 0 7.47669e+07 0.0275612 612647 7.52412e+07 5.335e+06 22172 3.72049e+07 0 0.164549 0.993696 0.802573 7.47669e+07 0.00272474 1.62306e+07 7.22412e+06 1.63787e+07 183 1.63637e+07 1.23228e+07 0.00231207 1.63995e+07 50.0547 0.00814244 0.995748 0 50.2272 GTEX-V955-1326-SM-4JBHR 1 B1 6 pieces ~9x2mm. Mucosa extremely well preserved, ~30-40% thickness 7.3 Stomach Stomach 0000945 168 1283 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.981416 424136 0.979079 0.984403 0.845388 21898 1 76 0.0019873 314 0 7.31998e+07 0.0205833 647722 7.43596e+07 5.42696e+06 21918 3.63233e+07 0 0.133691 0.984403 0.832202 7.31998e+07 0.00309618 1.68672e+07 8.87645e+07 1.69636e+07 225 1.70647e+07 1.9742e+07 0.00254006 1.69871e+07 49.8861 0.00871067 0.987389 0 50.1425 GTEX-V955-1626-SM-4JBHJ 1 B1 8 pieces ~10x2mm. Presumed transverse. Well-preserved mucosa is 10-20% thickness 7 Colon Colon - Transverse 0001157 197 1254 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.990485 564221 0.972644 0.992831 0.818743 23522 1 76 0.00191431 212 0 8.75107e+07 0.0270127 540075 8.81426e+07 6.45229e+06 23546 4.35196e+07 0 0.153902 0.992831 0.812873 8.75107e+07 0.00273303 1.90398e+07 7.80676e+06 1.91412e+07 231 1.91763e+07 1.49752e+07 0.0023227 1.92056e+07 50.0382 0.00612729 0.995176 0 50.1329 GTEX-V955-1726-SM-4JBHF 1 B1 6 pieces ~9x3mm, presumed sigmoid. Essentially all muscle, well preserved 6.3 Colon Colon - Sigmoid 0001159 209 1242 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.989667 532740 0.967481 0.991934 0.764351 23775 1 76 0.00203713 169 0 7.83417e+07 0.0323135 724174 7.89787e+07 5.50401e+06 23807 3.89615e+07 0 0.203131 0.991934 0.758185 7.83417e+07 0.00287574 1.6982e+07 7.81335e+06 1.71045e+07 189 1.71032e+07 1.10467e+07 0.00245548 1.71535e+07 50.0734 0.00916923 0.9942 0 50.1797 GTEX-V955-1826-SM-4JBIL 1 B1 2 pieces ~13x9mm. Well preserved glands. Thin layer of prostatic urethral epithelium along one edge, encircled. 5.8 Prostate Prostate 0002367 215 1236 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.989782 346500 0.964169 0.992148 0.759383 24450 1 76 0.0020426 157 0 7.56463e+07 0.0355869 558001 7.62449e+07 5.63686e+06 24483 3.76198e+07 0 0.204786 0.992148 0.75342 7.56463e+07 0.00282095 1.64086e+07 9.93906e+06 1.65345e+07 176 1.65531e+07 1.13255e+07 0.00243085 1.657e+07 50.0256 0.00731853 0.994514 0 50.191 GTEX-V955-1926-SM-4KL1L 1 B1 2 pieces ~8x6mm. Spermatogenesis present. 6.4 Testis Testis 0000473 223 1228 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.98892 789282 0.926375 0.990899 0.732327 33443 1 76 0.00234911 282 0 1.05814e+08 0.0733214 1.18303e+06 1.06786e+08 8.8976e+06 33510 5.26741e+07 0 0.194048 0.990899 0.725663 1.05814e+08 0.00336116 2.18536e+07 2.59519e+07 2.20322e+07 282 2.21108e+07 1.63596e+07 0.00285412 2.19749e+07 49.8459 0.0110785 0.992879 0 50.2034 GTEX-V955-2026-SM-3GAFA 1 B1 2 pieces ~14x10mm, all fat, no ductal elements seen 6.6 Breast Breast - Mammary Tissue 0008367 232 1219 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.867065 245150 0.968285 0.868596 0.790048 22474 1 76 0.00198624 274 0 1.08565e+08 0.0313884 839150 1.24989e+08 1.71619e+07 22521 5.39615e+07 0 0.178236 0.868596 0.686233 1.08565e+08 0.00709774 2.37575e+07 1.28009e+07 2.38506e+07 278 2.37641e+07 1.59414e+07 0.00453748 2.40184e+07 50.2661 0.00671381 0.870128 0 50.0978 GTEX-V955-2426-SM-3GAEF 0 B1 2 pieces ~11x8mm. Minimal interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 254 1197 BP-26868 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.950416 231071 0.978299 0.952347 0.856038 22431 1 76 0.00180812 399 0 1.36099e+08 0.0214371 1.67714e+06 1.42909e+08 9.51462e+06 22460 6.76573e+07 0 0.12226 0.952347 0.815245 1.36099e+08 0.00729942 2.97984e+07 1.27208e+07 2.99179e+07 431 2.9738e+07 2.47903e+07 0.0045482 3.0231e+07 50.411 0.0117357 0.954278 0 50.1001 GTEX-V955-2526-SM-4JBJG 0 B1 2 pieces ~7mm d, 60% interstital fat amongst nerve bundles 5.8 Nerve Nerve - Tibial 0001323 260 1191 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3561 07/20/2013 TruSeq.v1 RNASEQ 0.988918 383402 0.968968 0.990878 0.757017 23008 1 76 0.00208845 149 0 6.81207e+07 0.0308103 387399 6.87479e+07 5.08394e+06 23044 3.38796e+07 0 0.211951 0.990878 0.750111 6.81207e+07 0.00297768 1.49862e+07 6.98134e+06 1.5108e+07 167 1.51036e+07 9.29274e+06 0.00253219 1.5122e+07 50.0304 0.00563507 0.992837 0 50.2025 GTEX-V955-2626-SM-3NM9F 0 B1 2 pieces ~8x6mm. 20% occlusive atherosclerosis, relatively clean specimens 6.9 Blood Vessel Artery - Tibial 0007610 260 1191 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988804 378148 0.969258 0.991263 0.798893 22311 1 76 0.00392253 208 0 9.83436e+07 0.0303861 419628 9.92104e+07 1.97607e+07 22341 4.88653e+07 0 0.170366 0.991263 0.791913 9.83436e+07 0.00510918 2.10735e+07 1.03386e+07 2.11366e+07 239 2.11721e+07 1.65197e+07 0.00451438 2.12697e+07 50.115 0.00422968 0.993723 0 50.0748 GTEX-VJWN-0003-SM-3G3S4 C1 Blood Whole Blood 0013756 923 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840042_R02C01 GTEX-VJWN-0003-SM-3G3T5 C1 Blood Whole Blood 0013756 923 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R02C01 GTEX-VJWN-0003-SM-7DRQA C1 Blood Whole Blood 0013756 923 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 LCSET-6341 04/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-VJWN-0005-SM-3GIKF C1 7.5 Blood Whole Blood 0013756 923 BP-25314 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.751533 207684 0.979986 0.754886 0.794293 19374 1 76 0.00328748 129 0 7.63611e+07 0.0161255 511511 1.01156e+08 1.05939e+07 19390 3.7686e+07 0 0.185693 0.754886 0.599601 7.63611e+07 0.00859594 1.76266e+07 7.49847e+07 1.78165e+07 143 1.78598e+07 1.70444e+07 0.00592992 1.79216e+07 50.0864 0.00505667 0.758239 0 50.2679 GTEX-VJWN-0126-SM-3GIK7 2 C1 6 pieces, up to 6x3.5mm; subcutaneous adipose up to 0.7mm on 2 pieces 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 1045 1007 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.908801 140250 0.973058 0.910431 0.755269 23211 1 76 0.00257716 188 0 8.59018e+07 0.026645 561502 9.43529e+07 6.39974e+06 23263 4.26451e+07 0 0.217789 0.910431 0.68762 8.59018e+07 0.00701669 1.8784e+07 8.07253e+06 1.88989e+07 198 1.88311e+07 1.25589e+07 0.00479295 1.90047e+07 50.2294 0.00595108 0.912061 0 50.1525 GTEX-VJWN-0226-SM-EZ6LF 1 C1 2 pieces, 8x4 & 7x6.5mm; smaller piece has more fibrous stroma than larger 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 1048 1005 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.981961 167689 0.975427 0.983358 0.822935 23163 1 76 0.00246541 213 0 8.37969e+07 0.0242856 243151 8.52151e+07 6.2527e+06 23197 4.17518e+07 0 0.152492 0.983358 0.80924 8.37969e+07 0.00374504 1.83601e+07 7.49258e+06 1.84255e+07 228 1.83853e+07 1.49069e+07 0.00310432 1.85147e+07 50.1753 0.00285338 0.984755 0 50.0889 GTEX-VJWN-0426-SM-3GIJI 1 C1 2 pieces, 7x5 & 8x5mm; 6.8 Muscle Muscle - Skeletal 0011907 1084 970 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.852954 84108 0.976464 0.854739 0.85137 20141 1 76 0.00235561 143 0 6.84376e+07 0.0233243 809105 8.00684e+07 6.56236e+06 20157 3.40302e+07 0 0.125095 0.854739 0.727699 6.84376e+07 0.00672111 1.4733e+07 5.42489e+06 1.4871e+07 164 1.48008e+07 1.25032e+07 0.0045338 1.4932e+07 50.2206 0.0101052 0.856525 0 50.233 GTEX-VJWN-0626-SM-3NMAN 1 C1 2 pieces, 2x1 & 2.5x2mm; one artery, one vein; ~50% adipose encasing vessels 6 Blood Vessel Artery - Tibial 0007610 1095 960 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988917 402194 0.970224 0.991737 0.821362 24536 1 76 0.00400354 278 0 1.11196e+08 0.0294518 313938 1.12122e+08 2.29036e+07 24565 5.52583e+07 0 0.148862 0.991737 0.814576 1.11196e+08 0.00528093 2.3896e+07 1.31874e+07 2.40931e+07 309 2.41139e+07 2.02925e+07 0.00464042 2.41777e+07 50.0661 0.00279996 0.994558 0 50.2054 GTEX-VJWN-0726-SM-3GIJ8 2 C1 2 pieces, 7x6 & 9x6.5mm; small number of lobules and ~90% adipose 5.9 Breast Breast - Mammary Tissue 0008367 1091 965 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.970953 148379 0.975116 0.973328 0.747762 24124 1 76 0.00250224 151 0 7.5802e+07 0.0244627 226736 7.78792e+07 5.16828e+06 24164 3.76199e+07 0 0.227354 0.973328 0.727818 7.5802e+07 0.0070044 1.6622e+07 7.2414e+06 1.68266e+07 172 1.67563e+07 1.16875e+07 0.00474783 1.68785e+07 50.1817 0.00291138 0.975703 0 50.3059 GTEX-VJWN-1026-SM-4M1ZN 1 C1 2 pieces, 8.5x5 & 8x4mm; appears edematous 5.8 Heart Heart - Atrial Appendage 0006631 1104 954 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989335 148665 0.976157 0.9919 0.812535 20439 1 76 0.0019714 119 0 4.78891e+07 0.0236128 822604 4.82802e+07 1.69901e+06 20449 2.38241e+07 0 0.163622 0.9919 0.805953 4.78891e+07 0.00283452 1.04651e+07 5.43023e+06 1.06084e+07 134 1.05983e+07 6.99671e+06 0.00240184 1.05943e+07 49.9905 0.0170381 0.994465 0 50.34 GTEX-VJWN-1326-SM-EVR2Z 2 C1 2 pieces, 7x7 & 8x6mm; markedly congested with focal hemorrhages; minimal air; 5.5 Lung Lung 0008952 1110 950 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.985736 289014 0.975896 0.987877 0.740304 23845 1 76 0.0026304 206 0 9.20561e+07 0.0236613 703427 9.31858e+07 7.52813e+06 23883 4.57711e+07 0 0.235592 0.987877 0.73133 9.20561e+07 0.00396606 2.03544e+07 8.78226e+06 2.05949e+07 212 2.05553e+07 1.36398e+07 0.00329678 2.0582e+07 50.0325 0.00754865 0.990018 0 50.2937 GTEX-VJWN-2326-SM-EVYAP 0 C1 2 pieces, 8.4x7 & 9x4mm; well preserved 5.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1132 936 BP-27120 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.977197 260290 0.975097 0.977772 0.796473 23230 1 76 0.00204503 191 0 8.25779e+07 0.0245275 422516 8.44552e+07 3.73887e+06 23258 4.11324e+07 0 0.178624 0.977772 0.778769 8.25779e+07 0.00323022 1.81349e+07 9.93013e+06 1.83565e+07 207 1.82693e+07 1.3765e+07 0.00263727 1.8283e+07 50.0187 0.00500284 0.978346 0 50.3037 GTEX-VJWN-2926-SM-DMZ2G 1 C1 2 pieces, 7x7 & 8x7mm; large corpora albicantia Ovary Ovary 0000992 1151 921 BP-27124 DNA Isolation from Tissue via QIAgen Spin Column 07/09/2012 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-VJYA-0001-SM-3NMDJ B1 9.2 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -129 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992029 694614 0.966832 0.993939 0.777428 22905 1 76 0.00315785 287 0 1.11059e+08 0.0326323 867252 1.11737e+08 1.27763e+07 22947 5.52919e+07 0 0.189405 0.993939 0.772716 1.11059e+08 0.00432349 2.46068e+07 2.09448e+07 2.46589e+07 256 2.47245e+07 2.47511e+07 0.00373955 2.47473e+07 50.0231 0.00776158 0.995849 0 50.0529 GTEX-VJYA-0003-SM-3G3S9 B1 Blood Whole Blood 0013756 -129 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840042_R03C01 GTEX-VJYA-0003-SM-3G3TA B1 Blood Whole Blood 0013756 -129 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R03C01 GTEX-VJYA-0003-SM-4X5ZU B1 Blood Whole Blood 0013756 -129 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-VJYA-0003-SM-5SOED B1 Blood Whole Blood 0013756 -129 BP-25321 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/14/2012 LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-VJYA-0005-SM-3P5ZD B1 7.7 Blood Whole Blood 0013756 -129 BP-25314 RNA isolation_PAXgene Blood RNA (Manual) 05/14/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.932539 884978 0.964298 0.954117 0.797717 19423 1 76 0.00350281 120 0 9.59711e+07 0.0347771 208190 1.00586e+08 1.3754e+07 19433 4.67479e+07 0 0.166581 0.954117 0.761115 9.59711e+07 0.00538455 2.1382e+07 1.33274e+08 2.15945e+07 148 2.25333e+07 2.42424e+07 0.0044224 2.24771e+07 49.9376 0.00206976 0.975695 0 50.2472 GTEX-VJYA-0126-SM-4KL1P 1 B1 2 pieces ~10x8mm 7.5 Spleen Spleen 0002106 205 1108 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988828 540070 0.95947 0.991274 0.785677 23169 1 76 0.00312217 133 0 6.7109e+07 0.0393496 312970 6.76998e+07 5.72048e+06 23189 3.33432e+07 0 0.173793 0.991274 0.778821 6.7109e+07 0.00439203 1.46738e+07 1.63496e+07 1.47999e+07 146 1.48533e+07 1.13514e+07 0.00375554 1.47866e+07 49.8875 0.00462291 0.993719 0 50.2138 GTEX-VJYA-0226-SM-4KL1Q 1 B1 6 pieces ~7x1.5mm, up to ~0.5mm atherosis on luminal surface, up to~1mm adherent fibroadipose tissue on adventia 6 Blood Vessel Artery - Aorta 0001496 207 1107 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990704 426904 0.968978 0.992901 0.834962 22587 1 76 0.00255987 139 0 6.79921e+07 0.0305327 234997 6.84782e+07 6.06173e+06 22598 3.38268e+07 0 0.134016 0.992901 0.829035 6.79921e+07 0.0036213 1.46011e+07 1.00883e+07 1.47755e+07 153 1.47862e+07 1.33227e+07 0.00308941 1.47401e+07 49.9218 0.00343171 0.995098 0 50.2968 GTEX-VJYA-0326-SM-3GAEX 1 B1 2 pieces ~9x2mm, minimal congestion 6.9 Lung Lung 0008952 210 1104 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2015 09/12/2012 TruSeq.v1 RNASEQ 0.942738 149824 0.975813 0.944284 0.859701 24002 1 76 0.00244535 235 0 1.059e+08 0.0236724 460486 1.12149e+08 7.72936e+06 24028 5.2636e+07 0 0.116112 0.944284 0.811801 1.059e+08 0.00775194 2.34176e+07 8.6577e+06 2.36784e+07 259 2.35378e+07 1.9514e+07 0.0050943 2.37251e+07 50.1982 0.00410604 0.945829 0 50.2768 GTEX-VJYA-0426-SM-3GIJK 1 B1 2 pieces ~11x8mm, focal regressive areas 7.4 Thyroid Thyroid 0002046 218 1097 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.974243 180665 0.966633 0.976701 0.765604 23820 1 76 0.00276625 163 0 9.08046e+07 0.0330432 378494 9.29707e+07 6.2187e+06 23865 4.51221e+07 0 0.201029 0.976701 0.747766 9.08046e+07 0.00736824 1.97165e+07 7.74439e+06 1.9864e+07 194 1.98237e+07 1.44444e+07 0.00506146 1.99763e+07 50.1917 0.00407111 0.979159 0 50.1863 GTEX-VJYA-0526-SM-4KL1R 1 B1 2pieces ~7x4mm, adherent nubbins of fat up to ~4-3mm in dimensions on both 8.8 Adrenal Gland Adrenal Gland 0002369 229 1086 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.991107 453514 0.966036 0.993197 0.822961 22012 1 76 0.00314284 131 0 6.93574e+07 0.0336558 1.38393e+06 6.98325e+07 6.0963e+06 22029 3.45294e+07 0 0.143074 0.993197 0.817363 6.93574e+07 0.00416773 1.50153e+07 1.66744e+07 1.51422e+07 154 1.51919e+07 1.07664e+07 0.00365421 1.50951e+07 49.8402 0.0198178 0.995287 0 50.2104 GTEX-VJYA-0626-SM-4KL1S 1 B1 6 ~9x4 mm pieces 7.9 Esophagus Esophagus - Muscularis 0004648 230 1086 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989814 491516 0.963396 0.991903 0.807398 22273 1 76 0.00276083 143 0 6.86264e+07 0.0363445 507093 6.91866e+07 5.93547e+06 22287 3.41532e+07 0 0.155999 0.991903 0.80086 6.86264e+07 0.00382371 1.44409e+07 1.33418e+07 1.46379e+07 152 1.4652e+07 1.13481e+07 0.00329115 1.45657e+07 49.8524 0.00732936 0.993992 0 50.3388 GTEX-VJYA-0726-SM-4KL1T 1 B1 6 pieces ~6x4mm, squamous mucosa is ~10% thickness, representative intramural mucus glands encircled 9.6 Esophagus Esophagus - Mucosa 0006920 234 1083 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988659 590389 0.960652 0.990929 0.802441 21255 1 76 0.00261724 132 0 6.28548e+07 0.0389954 377314 6.34302e+07 5.75361e+06 21269 3.12805e+07 0 0.158211 0.990929 0.795162 6.28548e+07 0.00359208 1.38562e+07 1.95735e+07 1.39951e+07 133 1.40525e+07 1.22834e+07 0.00310354 1.39446e+07 49.8074 0.00594849 0.993199 0 50.2494 GTEX-VJYA-0826-SM-4KL1M 1 B1 2 pieces, ~8x8mm, ~50% fibrosis/fat, evidence of old pancreatitis, representative areas encircled 5.9 Pancreas Pancreas 0001150 250 1067 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989475 457843 0.964337 0.991787 0.805435 22646 1 76 0.00276683 115 0 7.39771e+07 0.0352915 408864 7.45898e+07 6.57408e+06 22670 3.67991e+07 0 0.158902 0.991787 0.79882 7.39771e+07 0.00397334 1.65125e+07 2.48548e+07 1.67726e+07 128 1.67567e+07 1.74755e+07 0.00336868 1.67089e+07 49.9287 0.0054815 0.994098 0 50.3906 GTEX-VJYA-0926-SM-4KL1N 1 B1 6 pieces ~7x2mm, ~50% mucosa/stroma 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 251 1067 BP-26874 RNA isolation_PAXgene Tissue miRNA 07/02/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.980277 411852 0.959884 0.982432 0.803382 23841 1 76 0.00491938 158 0 7.97023e+07 0.0329445 440028 8.11275e+07 7.48017e+06 23868 3.93307e+07 0 0.156501 0.982432 0.789269 7.97023e+07 0.00587099 1.75481e+07 2.25032e+07 1.7625e+07 170 1.77656e+07 1.20832e+07 0.00539414 1.75708e+07 49.7243 0.0054239 0.984588 0 50.1093 GTEX-VJYA-1026-SM-4KL21 1 B1 6 pieces ~7x4mm, ~20% mucosa, well preserved 7.1 Stomach Stomach 0000945 254 1064 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.986887 327099 0.975861 0.988907 0.83776 22913 1 76 0.00349528 323 0 9.10959e+07 0.0234598 1.6322e+06 9.21177e+07 8.04154e+06 22931 4.53377e+07 0 0.1381 0.988907 0.828467 9.10959e+07 0.00450655 2.02284e+07 5.74205e+07 2.04562e+07 268 2.04853e+07 1.63088e+07 0.00399988 2.03642e+07 49.8519 0.0177186 0.990926 0 50.2799 GTEX-VJYA-1126-SM-3GIJU 0 B1 6 pieces, ~6x3mm, squamous epithelium is 1-2% thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 257 1062 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.94544 114402 0.970845 0.948574 0.80662 23388 1 76 0.00298148 177 0 7.27777e+07 0.0288824 369068 7.67233e+07 5.99762e+06 23413 3.61233e+07 0 0.164225 0.948574 0.765139 7.27777e+07 0.0079483 1.56917e+07 6.93812e+06 1.58269e+07 175 1.58349e+07 1.17923e+07 0.00545668 1.59131e+07 50.1232 0.00481038 0.951708 0 50.2145 GTEX-VJYA-1226-SM-3GIJ6 1 B1 2 pieces ~8x7mm, one aliquot with minimal glands, mainly stroma 7.2 Prostate Prostate 0002367 258 1062 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.687213 100045 0.970022 0.689836 0.758477 22690 1 76 0.00295419 136 0 4.04141e+07 0.0296459 203118 5.85851e+07 2.23499e+07 22710 2.00343e+07 0 0.211544 0.689836 0.523226 4.04141e+07 0.00784127 8.81628e+06 3.74789e+06 8.86284e+06 152 8.86979e+06 6.02863e+06 0.00538844 8.95531e+06 50.2399 0.00346706 0.69246 0 50.1317 GTEX-VJYA-1326-SM-3GIJC 0 B1 2 pieces ~15x7mm 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 260 1060 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.479986 62314 0.974741 0.482008 0.822685 21381 1 76 0.00293817 138 0 4.12924e+07 0.0249498 224588 8.56674e+07 1.01574e+07 21395 2.04289e+07 0 0.152056 0.482008 0.396541 4.12924e+07 0.00784027 9.04393e+06 3.20302e+06 9.12868e+06 148 9.13848e+06 6.61808e+06 0.00537893 9.19844e+06 50.1635 0.00262163 0.484031 0 50.2332 GTEX-VJYA-1426-SM-4KL1Y 1 B1 2 pieces ~8x8mm, diffuse atrophy/fibrosis, reduced spermatogenesis 6.6 Testis Testis 0000473 261 1060 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.987195 524281 0.933535 0.989656 0.718967 32959 1 76 0.00284722 176 0 9.31731e+07 0.0661947 931378 9.4147e+07 8.52118e+06 33023 4.63509e+07 0 0.214569 0.989656 0.71153 9.31731e+07 0.00379707 1.95595e+07 1.64685e+07 1.97084e+07 194 1.98007e+07 1.36559e+07 0.00332097 1.96796e+07 49.8465 0.00989281 0.992117 0 50.1896 GTEX-VJYA-1526-SM-3GIJV 0 B1 6 pieces ~6x3mm, squamous epithelium is ~2% thickness 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 265 1057 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.86104 165839 0.967116 0.863577 0.784791 23338 1 76 0.00310976 160 0 7.74338e+07 0.0324932 499404 8.96663e+07 6.9088e+06 23372 3.84119e+07 0 0.182324 0.863577 0.677728 7.74338e+07 0.00780824 1.67625e+07 7.70148e+06 1.6974e+07 178 1.69298e+07 1.17223e+07 0.0054521 1.70247e+07 50.1397 0.00556958 0.866114 0 50.3134 GTEX-VJYA-1626-SM-EXOHL 1 B1 2 pieces ~12x88mm 5.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 266 1056 BP-26934 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.986604 212901 0.977331 0.988469 0.843482 22922 1 76 0.00254292 162 0 7.4676e+07 0.0223688 609582 7.55471e+07 4.22808e+06 22943 3.7182e+07 0 0.133849 0.988469 0.833755 7.4676e+07 0.00378396 1.64075e+07 7.17249e+06 1.65708e+07 194 1.65447e+07 1.20426e+07 0.00316227 1.65579e+07 50.0199 0.0080689 0.990334 0 50.2476 GTEX-VJYA-1726-SM-3NMDQ 0 B1 2 pieces ~4mm d. Adherent fat up to ~1.5mm thick on both 8 Nerve Nerve - Tibial 0001323 270 1053 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990381 306679 0.97048 0.9928 0.788329 24762 1 76 0.00301843 216 0 9.67692e+07 0.0292062 224290 9.7471e+07 1.19278e+07 24799 4.81249e+07 0 0.182151 0.9928 0.782653 9.67692e+07 0.00437248 2.12358e+07 9.72294e+06 2.13459e+07 241 2.13948e+07 1.66856e+07 0.0036938 2.14098e+07 50.0175 0.00230109 0.995219 0 50.1293 GTEX-VJYA-1826-SM-4KL1W 0 B1 2 pieces~4mm d. Subtotal occlusive atherosclerotic debris, calcified, in both, encircled 6.6 Blood Vessel Artery - Tibial 0007610 271 1052 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.987319 630119 0.958446 0.990127 0.821769 22673 1 76 0.00263704 151 0 7.13642e+07 0.0408681 236191 7.20758e+07 6.16735e+06 22687 3.54507e+07 0 0.136677 0.990127 0.813655 7.13642e+07 0.00399015 1.51723e+07 1.89162e+07 1.53849e+07 160 1.53826e+07 1.37456e+07 0.00331168 1.53923e+07 50.0158 0.00327698 0.992934 0 50.3479 GTEX-VJYA-1926-SM-3GIJJ 0 B1 2 pieces ~8x7 mm, 10-20% interstitial fat/fibrous tissue 8 Muscle Muscle - Skeletal 0011907 275 1049 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.802793 92057 0.97941 0.805368 0.867436 17840 1 76 0.00282283 139 0 5.48052e+07 0.0203463 596139 6.80499e+07 6.33916e+06 17849 2.72066e+07 0 0.111974 0.805368 0.698605 5.48052e+07 0.00765073 1.15638e+07 4.96199e+06 1.17273e+07 153 1.16831e+07 1.01467e+07 0.00522906 1.17647e+07 50.1742 0.00876032 0.807942 0 50.351 GTEX-VJYA-2026-SM-4KL1K 1 B1 6 pieces ~~7x2mm, mucosa well preserved, ~10-20 thickness 6.4 Colon Colon - Transverse 0001157 276 1048 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.987994 432550 0.967013 0.990454 0.792627 24392 1 76 0.00336235 169 0 8.27535e+07 0.0318835 1.3183e+06 8.3551e+07 7.26666e+06 24421 4.11136e+07 0 0.174386 0.990454 0.785061 8.27535e+07 0.00459156 1.80138e+07 1.26521e+07 1.81088e+07 196 1.81196e+07 1.09765e+07 0.00397543 1.81943e+07 50.1029 0.0157784 0.992915 0 50.1315 GTEX-VJYA-2126-SM-4KL1O 1 B1 6 pieces ~6x3mm. Mucosa well preserved, ~15-20% thickness 8.1 Colon Colon - Sigmoid 0001159 277 1048 BP-26938 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.984044 938702 0.961897 0.98609 0.783676 27148 1 76 0.00428994 404 0 1.77419e+08 0.0325377 1.21985e+06 1.79921e+08 1.50226e+07 27214 8.77541e+07 0 0.178221 0.98609 0.772775 1.77419e+08 0.00534811 3.884e+07 4.1994e+07 3.91267e+07 391 3.93235e+07 2.71324e+07 0.00481793 3.89846e+07 49.7837 0.00677991 0.988136 0 50.1839 GTEX-VUSG-0002-SM-3G3SC B1 Blood Whole Blood 0013756 114 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003023_R03C01 GTEX-VUSG-0002-SM-3G3TD B1 Blood Whole Blood 0013756 114 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R03C01 GTEX-VUSG-0002-SM-4X61J B1 Blood Whole Blood 0013756 114 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-VUSG-0002-SM-DLIPX B1 Blood Whole Blood 0013756 114 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-VUSG-0003-SM-3NMDK B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 114 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991049 758327 0.964767 0.993045 0.785015 22775 1 76 0.0029392 218 0 1.04106e+08 0.0348447 741823 1.04835e+08 1.22084e+07 22814 5.1816e+07 0 0.179751 0.993045 0.779555 1.04106e+08 0.00419686 2.30674e+07 1.90318e+07 2.31614e+07 226 2.32503e+07 2.27081e+07 0.00356677 2.31873e+07 49.9321 0.0070761 0.995041 0 50.1016 GTEX-VUSG-0003-SM-5S2S5 B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 114 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-0006-SM-3GIK9 B1 8.4 Blood Whole Blood 0013756 114 BP-25537 RNA isolation_PAXgene Blood RNA (Manual) 05/21/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.933376 471257 0.968239 0.936304 0.831254 19538 1 76 0.0027615 159 0 8.91771e+07 0.0313382 580249 9.52437e+07 7.81944e+06 19557 4.42515e+07 0 0.136985 0.936304 0.778307 8.91771e+07 0.00747503 1.96255e+07 2.70753e+07 1.98912e+07 186 1.99004e+07 1.76905e+07 0.00511089 1.989e+07 49.9869 0.00609226 0.939232 0 50.3363 GTEX-VUSG-0006-SM-5S2TA B1 8.4 Blood Whole Blood 0013756 114 BP-25537 RNA isolation_PAXgene Blood RNA (Manual) 05/21/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-0008-SM-4KL24 B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 288 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990392 696819 0.965908 0.992981 0.826573 22039 1 76 0.00211053 223 0 8.73907e+07 0.0337014 327721 8.80085e+07 7.84782e+06 22064 4.34779e+07 0 0.139334 0.992981 0.820772 8.73907e+07 0.00305902 1.92839e+07 1.59266e+07 1.93738e+07 241 1.95338e+07 1.75382e+07 0.00258354 1.9335e+07 49.7442 0.00372374 0.99557 0 50.1163 GTEX-VUSG-0126-SM-4KL1X 1 B1 2 pieces ~9x8mm. 10% macrovesicular steatosis 8.2 Liver Liver 0001114 128 635 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.991822 507736 0.977233 0.993953 0.854531 20703 1 76 0.00214963 199 0 8.98702e+07 0.0218197 971760 9.04169e+07 7.31778e+06 20715 4.47075e+07 0 0.122701 0.993953 0.849364 8.98702e+07 0.00310122 1.95037e+07 1.82721e+07 1.96175e+07 220 1.97146e+07 1.92305e+07 0.00262441 1.95885e+07 49.8397 0.0107475 0.996084 0 50.1455 GTEX-VUSG-0326-SM-3GIJ7 1 B1 2 pieces ~11x8mm. Well preserved, & visible Islets, representative ones encircled. !0-20% peripheral fat, ensquared. 7 Pancreas Pancreas 0001150 134 629 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.971892 476331 0.964773 0.975944 0.7667 20604 1 76 0.0026206 143 0 4.77384e+07 0.0349244 278256 4.89151e+07 3.74473e+06 20625 2.36586e+07 0 0.198074 0.975944 0.748256 4.77384e+07 0.00771574 1.06118e+07 1.30991e+07 1.08621e+07 167 1.08161e+07 1.13405e+07 0.0051576 1.08613e+07 50.1043 0.00568855 0.979995 0 50.5828 GTEX-VUSG-0326-SM-5S2ST 1 B1 2 pieces ~11x8mm. Well preserved, & visible Islets, representative ones encircled. !0-20% peripheral fat, ensquared. 7 Pancreas Pancreas 0001150 134 629 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-0426-SM-3GIKD 2 B1 2 pieces ~13x7mm less well preserved than usual 7.1 Thyroid Thyroid 0002046 145 618 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.951369 263065 0.962731 0.954191 0.731557 24785 1 76 0.00247009 170 0 9.16815e+07 0.0369828 315856 9.60829e+07 7.33458e+06 24836 4.55138e+07 0 0.231174 0.954191 0.698046 9.16815e+07 0.00704982 1.99947e+07 8.47558e+06 2.00901e+07 199 2.0132e+07 1.33677e+07 0.00475318 2.02116e+07 50.0987 0.00328733 0.957014 0 50.1191 GTEX-VUSG-0426-SM-5S2TB 2 B1 2 pieces ~13x7mm less well preserved than usual 7.1 Thyroid Thyroid 0002046 145 618 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-0526-SM-4KL22 1 B1 6 pieces ~11x2mm, minimal atherosis 7.6 Blood Vessel Artery - Aorta 0001496 151 612 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989508 400652 0.972808 0.991633 0.813823 21983 1 76 0.00226103 154 0 7.39049e+07 0.0267883 206327 7.45285e+07 6.42833e+06 22002 3.67671e+07 0 0.158985 0.991633 0.807014 7.39049e+07 0.00346089 1.60214e+07 7.87811e+06 1.61367e+07 172 1.61767e+07 1.33135e+07 0.00285968 1.61405e+07 49.9441 0.00276843 0.993759 0 50.1793 GTEX-VUSG-0626-SM-4KL1Z 1 B1 2 pieces ~2mm d. Minimal atherosclerosis 6.9 Blood Vessel Artery - Coronary 0001621 161 602 BP-26940 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990788 357422 0.973977 0.992794 0.830625 22021 1 76 0.00230646 166 0 7.9427e+07 0.0256107 275350 8.00035e+07 7.09995e+06 22035 3.95282e+07 0 0.143353 0.992794 0.824639 7.9427e+07 0.00335827 1.71125e+07 6.83625e+06 1.72832e+07 184 1.73222e+07 1.5385e+07 0.0028313 1.72278e+07 49.8634 0.00344172 0.994801 0 50.2482 GTEX-VUSG-0726-SM-3GIK1 1 B1 2 pieces ~12x7mm 7.2 Heart Heart - Atrial Appendage 0006631 163 600 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.464251 63419 0.978933 0.465725 0.859956 19191 1 76 0.00244854 123 0 3.33109e+07 0.0204986 579985 7.15248e+07 7.69759e+06 19197 1.6448e+07 0 0.118977 0.465725 0.400503 3.33109e+07 0.00773429 7.30802e+06 3.07482e+06 7.34216e+06 142 7.30948e+06 5.28776e+06 0.00508305 7.43988e+06 50.4421 0.00810887 0.467198 0 50.1165 GTEX-VUSG-0926-SM-3GIK6 1 B1 2 pieces ~11x9mm. Minimal congestion; mild emphysematous changes 7.5 Lung Lung 0008952 167 596 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.950944 127390 0.974941 0.953776 0.786076 23385 1 76 0.00255889 147 0 7.17381e+07 0.0245972 196431 7.52148e+07 5.71416e+06 23425 3.56054e+07 0 0.188865 0.953776 0.749741 7.17381e+07 0.00738902 1.5909e+07 5.31387e+06 1.60021e+07 171 1.59918e+07 1.21025e+07 0.00496678 1.61239e+07 50.2058 0.0026116 0.956609 0 50.1458 GTEX-VUSG-0926-SM-5S2SV 1 B1 2 pieces ~11x9mm. Minimal congestion; mild emphysematous changes 7.5 Lung Lung 0008952 167 596 BP-26943 RNA isolation_PAXgene Tissue miRNA 07/03/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-1026-SM-4KKZN 1 B1 6 pieces ~11x3mm, all muscularis; good specimens 5.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 188 575 BP-27118 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.987074 431768 0.967314 0.989325 0.765476 24281 1 76 0.00236169 273 0 9.76976e+07 0.0324881 1.21033e+06 9.87517e+07 8.41835e+06 24313 4.86022e+07 0 0.201839 0.989325 0.757304 9.76976e+07 0.00354077 2.12805e+07 1.29384e+07 2.15188e+07 269 2.15077e+07 1.34155e+07 0.00294988 2.15077e+07 50 0.0122563 0.991576 0 50.2784 GTEX-VUSG-1126-SM-4KKZQ 1 B1 6 ~8x2mm pieces 7.1 Esophagus Esophagus - Muscularis 0004648 191 572 BP-27118 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989815 411454 0.966667 0.991984 0.792561 22476 1 76 0.0023201 149 0 6.96766e+07 0.0331029 746295 7.02396e+07 5.86527e+06 22494 3.46568e+07 0 0.174106 0.991984 0.786208 6.96766e+07 0.003507 1.50536e+07 9.34788e+06 1.51873e+07 168 1.5191e+07 1.06377e+07 0.00291225 1.52011e+07 50.0166 0.010625 0.994154 0 50.221 GTEX-VUSG-1226-SM-4KKZF 1 B1 6 pieces ~9x1.5mm. Squamous mucosa is ~10-15% of thickness 9 Esophagus Esophagus - Mucosa 0006920 194 569 BP-27118 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988778 650011 0.961164 0.99106 0.765626 22659 1 76 0.00243305 157 0 7.93389e+07 0.0385161 277422 8.00545e+07 7.38104e+06 22680 3.94806e+07 0 0.195538 0.99106 0.758781 7.93389e+07 0.00352159 1.74712e+07 2.28654e+07 1.77073e+07 165 1.77791e+07 1.46267e+07 0.00297606 1.75821e+07 49.7214 0.00346541 0.993343 0 50.3357 GTEX-VUSG-1426-SM-3GIJN 1 B1 2 pieces ~12x11mm 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 203 560 BP-27118 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.834016 109957 0.974571 0.836411 0.810618 21631 1 76 0.00240446 140 0 6.53527e+07 0.02518 1.43519e+06 7.81346e+07 6.52972e+06 21659 3.24472e+07 0 0.163954 0.836411 0.67801 6.53527e+07 0.00721501 1.44589e+07 5.60674e+06 1.46582e+07 179 1.46367e+07 8.26679e+06 0.00480285 1.46502e+07 50.023 0.0183682 0.838807 0 50.3423 GTEX-VUSG-1526-SM-4KKZH 2 B1 2 pieces ~12x9mm, all cortex, ~5% adherent fat, poorly preserved 6.5 Adrenal Gland Adrenal Gland 0002369 209 554 BP-27120 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989855 515832 0.968161 0.992374 0.784796 22846 1 76 0.00227568 201 0 8.23686e+07 0.0316427 2.01877e+06 8.30015e+07 6.78484e+06 22874 4.09762e+07 0 0.183365 0.992374 0.778811 8.23686e+07 0.00350187 1.80098e+07 1.41404e+07 1.81533e+07 226 1.82033e+07 1.01293e+07 0.00288722 1.81626e+07 49.944 0.0243221 0.994893 0 50.1984 GTEX-VUSG-1726-SM-4KKZL 2 B1 6 pieces ~7x1mm. Lymphoid elements weel seen in half (encircled). Pigmented foreign material noted (?tattoo) ensquared, in one 6.1 Small Intestine Small Intestine - Terminal Ileum 0001211 223 540 BP-27120 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988673 418322 0.957967 0.990968 0.71794 24572 1 76 0.00257084 145 0 7.65338e+07 0.0415203 370246 7.72314e+07 6.21702e+06 24610 3.80408e+07 0 0.240027 0.990968 0.711455 7.65338e+07 0.00384318 1.66814e+07 1.15505e+07 1.67946e+07 165 1.68336e+07 1.09192e+07 0.00320554 1.68187e+07 49.9778 0.00479398 0.993263 0 50.1691 GTEX-VUSG-2226-SM-4KKZO 1 B1 2 pieces ~14x11mm. Stromal fibrosis, rare ductal elements seen representative ones encircled 5.9 Breast Breast - Mammary Tissue 0008367 264 499 BP-27123 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.989486 343288 0.965383 0.991821 0.791591 26603 1 76 0.00218572 173 0 8.1242e+07 0.0343668 279965 8.19119e+07 6.736e+06 26633 4.04214e+07 0 0.173792 0.991821 0.785116 8.1242e+07 0.00339049 1.77175e+07 7.98186e+06 1.78991e+07 192 1.79208e+07 1.40347e+07 0.00278669 1.78818e+07 49.9456 0.00341788 0.994156 0 50.255 GTEX-VUSG-2326-SM-4KL1U 0 B1 6 pieces ~10x3mm. Squamous epithelium is ~1-2% thickness 6.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 273 490 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988356 551626 0.965635 0.99076 0.775694 23584 1 76 0.00230486 170 0 7.42847e+07 0.0341659 455636 7.49775e+07 6.6104e+06 23609 3.69509e+07 0 0.189941 0.99076 0.768526 7.42847e+07 0.00348878 1.61602e+07 1.31214e+07 1.63002e+07 177 1.63239e+07 1.12758e+07 0.00289539 1.6321e+07 49.9956 0.00607697 0.993164 0 50.2156 GTEX-VUSG-2426-SM-4KKZG 0 B1 2 pieces ~9x7mm. Contaminant fragements of skin present, encircled 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 287 476 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990593 396412 0.974774 0.992878 0.827742 22496 1 76 0.00217911 161 0 7.26901e+07 0.0249469 623023 7.32115e+07 6.01359e+06 22517 3.61714e+07 0 0.147032 0.992878 0.821848 7.26901e+07 0.00329312 1.59736e+07 8.60059e+06 1.61201e+07 181 1.61382e+07 1.25025e+07 0.00273483 1.61162e+07 49.9659 0.00850991 0.995164 0 50.2283 GTEX-VUSG-2426-SM-5S2S2 0 B1 2 pieces ~9x7mm. Contaminant fragements of skin present, encircled 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 287 476 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-2526-SM-4KL1V 0 B1 6 pieces ~8x2mm. Squamous epithelium is ~2-3% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 289 474 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988948 558466 0.959364 0.991334 0.76874 23614 1 76 0.00231227 159 0 7.00474e+07 0.0404488 325227 7.06598e+07 5.77336e+06 23641 3.48451e+07 0 0.190624 0.991334 0.762077 7.00474e+07 0.00355288 1.51045e+07 1.47141e+07 1.52321e+07 164 1.52563e+07 1.07761e+07 0.00293108 1.52546e+07 49.9972 0.00460272 0.993719 0 50.2103 GTEX-VUSG-2526-SM-5S2S9 0 B1 6 pieces ~8x2mm. Squamous epithelium is ~2-3% of thickness 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 289 474 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-2626-SM-4KKZI 0 B1 2 pieces ~12x8mm. Intertitial fat/fibrous scar tissue is ~10% of specimens 8.3 Muscle Muscle - Skeletal 0011907 293 470 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990991 418277 0.978366 0.993137 0.865316 21307 1 76 0.00198303 176 0 8.04085e+07 0.0213288 680736 8.09641e+07 6.84654e+06 21319 4.00284e+07 0 0.113049 0.993137 0.859378 8.04085e+07 0.00301163 1.69829e+07 1.15888e+07 1.71733e+07 184 1.72199e+07 1.78373e+07 0.00249622 1.70965e+07 49.8201 0.00840787 0.995283 0 50.2788 GTEX-VUSG-2626-SM-5S2TM 0 B1 2 pieces ~12x8mm. Intertitial fat/fibrous scar tissue is ~10% of specimens 8.3 Muscle Muscle - Skeletal 0011907 293 470 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSG-2726-SM-4KKZJ 0 B1 2 pieces ~5mm d. Clean specimen; interstital fat/fibrous tissue is ~15% of specimen 6 Nerve Nerve - Tibial 0001323 295 468 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988583 394772 0.969164 0.990771 0.812508 22995 1 76 0.00222011 170 0 7.74997e+07 0.0305445 398668 7.82216e+07 6.89415e+06 23024 3.85437e+07 0 0.156656 0.990771 0.80501 7.74997e+07 0.00342425 1.69887e+07 1.14325e+07 1.7215e+07 182 1.72007e+07 1.42312e+07 0.00282085 1.71757e+07 49.9635 0.00509665 0.992959 0 50.3308 GTEX-VUSG-2826-SM-4KKZM 0 B1 2 pieces ~4mm d, clean specimens, but one aliqout with adherent fibsrovascular nubbin ~4x2mm 7.5 Blood Vessel Artery - Tibial 0007610 298 465 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988381 321309 0.973136 0.990632 0.828017 21761 1 76 0.00222641 160 0 7.39254e+07 0.0264887 350345 7.46244e+07 6.48145e+06 21779 3.67835e+07 0 0.14512 0.990632 0.82026 7.39254e+07 0.00328327 1.59901e+07 7.3044e+06 1.61541e+07 170 1.61804e+07 1.41209e+07 0.00275364 1.61267e+07 49.9169 0.00469478 0.992883 0 50.2551 GTEX-VUSG-2826-SM-5S2RZ 0 B1 2 pieces ~4mm d, clean specimens, but one aliqout with adherent fibsrovascular nubbin ~4x2mm 7.5 Blood Vessel Artery - Tibial 0007610 298 465 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-VUSH-0002-SM-3PYKM B1 Blood Whole Blood 0013756 -90 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R06C02 GTEX-VUSH-0002-SM-3PZ7N B1 Blood Whole Blood 0013756 -90 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660004_R04C01 GTEX-VUSH-0002-SM-4X5ZZ B1 Blood Whole Blood 0013756 -90 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-VUSH-0002-SM-5SOEH B1 Blood Whole Blood 0013756 -90 BP-25528 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 05/21/2012 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-VUSH-0004-SM-3P61T B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -90 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952696 927607 0.967661 0.974352 0.845811 21389 1 76 0.00330299 221 0 1.04941e+08 0.031938 606483 1.07704e+08 1.39465e+07 21405 5.11894e+07 0 0.12185 0.974352 0.824118 1.04941e+08 0.00459834 2.27371e+07 2.12088e+07 2.28768e+07 242 2.39174e+07 2.62706e+07 0.00393627 2.37949e+07 49.8716 0.00563103 0.996008 0 50.1531 GTEX-VUSH-0005-SM-3NB2H B1 9.1 Blood Whole Blood 0013756 -90 BP-25537 RNA isolation_PAXgene Blood RNA (Manual) 05/21/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.980328 1.06899e+06 0.949788 0.985429 0.773755 20431 1 76 0.00480753 138 0 9.78357e+07 0.0493977 233287 9.92824e+07 1.82731e+07 20448 4.8478e+07 0 0.176033 0.985429 0.76248 9.78357e+07 0.00713375 2.11943e+07 8.27515e+07 2.1483e+07 160 2.1625e+07 1.97663e+07 0.00596462 2.15597e+07 49.9244 0.00234973 0.99053 0 50.3382 GTEX-VUSH-0008-SM-47JWK B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 55 BP-33619 RNA isolation_Trizol Manual (Cell Pellet) 11/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989506 523284 0.976337 0.992717 0.845958 21495 1 76 0.00236898 183 0 8.377e+07 0.0233089 363087 8.43846e+07 9.67364e+06 21513 4.16419e+07 0 0.130379 0.992717 0.839796 8.377e+07 0.00280801 1.86487e+07 1.02953e+07 1.86188e+07 178 1.87364e+07 2.08001e+07 0.00258778 1.87959e+07 50.0793 0.00430276 0.995927 0 49.96 GTEX-VUSH-0226-SM-EXUQV 1 B1 2 pieces, 11x10 & 12x9mm; ~30% central defect in one; 10% in other 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 71 1164 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.981944 209664 0.982014 0.98228 0.817849 20245 1 76 0.00209584 123 0 4.94407e+07 0.0176294 314750 5.03326e+07 1.75758e+06 20258 2.46261e+07 0 0.164165 0.98228 0.803357 4.94407e+07 0.00262415 1.09424e+07 4.39917e+06 1.10628e+07 128 1.10297e+07 8.85511e+06 0.00235991 1.09951e+07 49.9215 0.00625341 0.982616 0 50.2737 GTEX-VUSH-0326-SM-3NB2I 1 B1 2 pieces, 12.5x11 & 11x9mm; prominent focal hemorrhages and interstital edema; <5% adipose 7 Muscle Muscle - Skeletal 0011907 81 1154 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2318 12/16/2012 TruSeq.v1 EXCLUDE 0.985115 333169 0.97745 0.989435 0.844068 21724 1 76 0.00497312 199 0 9.62633e+07 0.0223876 3.3665e+06 9.72911e+07 1.5527e+07 21749 4.77678e+07 0 0.133382 0.989435 0.835151 9.62633e+07 0.00691204 2.09915e+07 1.51577e+07 2.12191e+07 249 2.13017e+07 1.18272e+07 0.00593835 2.12886e+07 49.9847 0.0346024 0.993756 0 50.2696 GTEX-VUSH-0526-SM-3NB2J 1 B1 2 pieces, 3x2 & 3.5x2mm;1, 2mm artery and 0.6 mm vein in each; <10% adipose 7.1 Blood Vessel Artery - Tibial 0007610 100 1135 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983702 270841 0.976599 0.988276 0.793513 21793 1 76 0.00420579 208 0 1.00281e+08 0.0230747 417556 1.01471e+08 1.78231e+07 21818 4.97239e+07 0 0.183086 0.988276 0.78421 1.00281e+08 0.00616893 2.15739e+07 1.01225e+07 2.17342e+07 220 2.18514e+07 1.74374e+07 0.00518282 2.18943e+07 50.0491 0.00411503 0.992849 0 50.1851 GTEX-W5WG-0002-SM-3NMDN B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -43 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992604 612334 0.970203 0.994602 0.834328 22006 1 76 0.00281731 217 0 9.99292e+07 0.0291921 756816 1.00472e+08 1.13533e+07 22036 4.97475e+07 0 0.135875 0.994602 0.829824 9.99292e+07 0.00402252 2.22363e+07 1.50117e+07 2.23057e+07 238 2.23744e+07 2.36908e+07 0.00341871 2.23622e+07 49.9864 0.00753264 0.9966 0 50.0778 GTEX-W5WG-0003-SM-3G3SH B1 Blood Whole Blood 0013756 -43 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003023_R04C01 GTEX-W5WG-0003-SM-3G3TI B1 Blood Whole Blood 0013756 -43 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R04C01 GTEX-W5WG-0003-SM-3UZF6 B1 Blood Whole Blood 0013756 -43 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) WES GTEX-W5WG-0003-SM-5URC3 B1 Blood Whole Blood 0013756 -43 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-W5WG-0006-SM-3GIJT B1 8.9 Blood Whole Blood 0013756 -43 BP-26073 RNA isolation_PAXgene Blood RNA (Manual) 06/08/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.498268 155565 0.961009 0.501001 0.804131 17730 1 76 0.00307296 135 0 3.14065e+07 0.0386674 226313 6.26875e+07 7.46527e+06 17736 1.54996e+07 0 0.156878 0.501001 0.402871 3.14065e+07 0.0086518 6.8716e+06 1.24437e+07 6.89982e+06 150 6.95285e+06 6.02572e+06 0.00584716 6.99297e+06 50.1439 0.00361018 0.503735 0 50.1025 GTEX-W5WG-0008-SM-4KL25 B1 9.2 Skin Cells - Cultured fibroblasts EFO_0002009 297 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990532 470550 0.966758 0.992827 0.820082 21088 1 76 0.00230005 154 0 6.6823e+07 0.0328456 273805 6.73057e+07 5.95141e+06 21109 3.3258e+07 0 0.146676 0.992827 0.814199 6.6823e+07 0.00308577 1.47723e+07 1.08117e+07 1.48396e+07 148 1.49365e+07 1.33508e+07 0.002692 1.4818e+07 49.801 0.00406808 0.995121 0 50.1138 GTEX-W5WG-0626-SM-4SOID 1 B1 2 pieces ~8x7 mm 8 Spleen Spleen 0002106 210 1132 BP-40880 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988455 763883 0.953492 0.991353 0.752396 24608 1 76 0.00263648 151 0 7.61964e+07 0.0458247 513678 7.6861e+07 4.02452e+06 24637 3.7856e+07 0 0.201095 0.991353 0.74589 7.61964e+07 0.0031879 1.65125e+07 1.5686e+07 1.66306e+07 171 1.66611e+07 1.12621e+07 0.00291139 1.67074e+07 50.0693 0.0066832 0.994251 0 50.1781 GTEX-W5WG-0726-SM-EXUQZ 1 B1 6 pieces~10 x 1mm 5.6 Blood Vessel Artery - Aorta 0001496 212 1130 BP-40880 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.989094 352316 0.972855 0.989508 0.831734 20507 1 76 0.00172638 127 0 5.35728e+07 0.026806 310159 5.41408e+07 1.66332e+06 20520 2.66894e+07 0 0.141121 0.989508 0.823008 5.35728e+07 0.00223676 1.15403e+07 4.44578e+06 1.16793e+07 139 1.16222e+07 9.45196e+06 0.00198146 1.16243e+07 50.0045 0.00572874 0.989923 0 50.2993 GTEX-W5WG-0826-SM-4RGNE 1 B1 2 pieces ~9x5mm. Well preserved; one aliquot is ~20 fat on one pole. Branching non dysplastic ductal elements noted in both, ensquared. Fatty areas encircled. Islets well seen. 7.7 Pancreas Pancreas 0001150 213 1130 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991252 658516 0.976239 0.993452 0.855275 21127 1 76 0.00239041 107 0 7.91291e+07 0.0235341 229065 7.96506e+07 6.94405e+06 21140 3.93491e+07 0 0.120964 0.993452 0.849675 7.91291e+07 0.00303953 1.81824e+07 2.79902e+07 1.84294e+07 117 1.84041e+07 2.46693e+07 0.00271425 1.83929e+07 49.9848 0.00287587 0.995653 0 50.3373 GTEX-W5WG-0926-SM-4RTX9 1 B1 2 pieces ~9x6mm. One is post menopausal cortex and medulla, the other is all medullary elements (supporting vessels/stroma), encircled 8.3 Ovary Ovary 0000992 226 1117 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3905 09/11/2013 TruSeq.v1 RNASEQ 0.991993 453164 0.964444 0.993827 0.752318 22437 1 76 0.00218802 128 0 5.67741e+07 0.0353075 123911 5.71267e+07 3.00105e+06 22467 2.82447e+07 0 0.212126 0.993827 0.747674 5.67741e+07 0.00301789 1.24203e+07 7.44246e+06 1.25346e+07 129 1.2529e+07 1.00811e+07 0.00260219 1.25382e+07 50.0183 0.00216906 0.995662 0 50.229 GTEX-W5WG-1026-SM-4LMIF 2 B1 6 pieces ~8x4mm. Squamous mucosa, partly detached, <2% thickness. Minimal attached fat 6.9 Vagina Vagina 0000996 230 1114 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.987356 314854 0.971702 0.990446 0.806198 23477 1 76 0.00224901 165 0 7.33806e+07 0.0279872 261565 7.40884e+07 5.89836e+06 23504 3.64821e+07 0 0.165504 0.990446 0.798496 7.33806e+07 0.00300388 1.60333e+07 6.78e+06 1.6173e+07 171 1.62241e+07 1.30276e+07 0.00262527 1.62005e+07 49.9636 0.00353044 0.993537 0 50.2169 GTEX-W5WG-1126-SM-4LMK4 1 B1 2 pieces ~9x6mm. Well-preserved, ~15% of larger aliquot is nubbins of adherent fat, ensquared. 9.5 Adrenal Gland Adrenal Gland 0002369 232 1112 BP-27126 RNA isolation_PAXgene Tissue miRNA 07/09/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988995 351355 0.977935 0.992342 0.845219 21965 1 76 0.00223772 201 0 8.17707e+07 0.0217218 1.41824e+06 8.24017e+07 6.41263e+06 21983 4.06493e+07 0 0.132715 0.992342 0.838747 8.17707e+07 0.00295659 1.79695e+07 1.05819e+07 1.81187e+07 234 1.81758e+07 1.41747e+07 0.00259594 1.81614e+07 49.9801 0.0172113 0.99569 0 50.2068 GTEX-W5WG-1326-SM-4LMI9 1 B1 2 pieces ~8x8mm. All muscularis, no glands/stroma noted 7 Uterus Uterus 0000995 244 1101 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988437 303705 0.965769 0.991374 0.770293 22886 1 76 0.00229365 141 0 6.58747e+07 0.0339904 231782 6.64478e+07 5.03181e+06 22910 3.27326e+07 0 0.195476 0.991374 0.763648 6.58747e+07 0.0030946 1.42742e+07 6.40346e+06 1.44137e+07 152 1.442e+07 1.05886e+07 0.00269294 1.44579e+07 50.0655 0.00348818 0.994311 0 50.2431 GTEX-W5WG-1426-SM-4KKZP 2 B1 2 pieces ~8x7mm, focal areas of lymphocytic infiltrate c/w early Hashimoto's/lymphocytic thyroiditis. Less-well preserved than usual. 6.6 Thyroid Thyroid 0002046 257 1089 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.988383 325111 0.96599 0.990516 0.778707 24737 1 76 0.00263381 167 0 8.08649e+07 0.0329048 406712 8.16392e+07 7.10004e+06 24769 4.02104e+07 0 0.187284 0.990516 0.771321 8.08649e+07 0.00373691 1.76521e+07 9.98778e+06 1.78213e+07 190 1.78119e+07 1.24498e+07 0.00318418 1.78237e+07 50.0166 0.00498182 0.992649 0 50.2384 GTEX-W5WG-1526-SM-4LMIG 1 B1 6 pieces ~7x5mm. 8.2 Esophagus Esophagus - Muscularis 0004648 257 1089 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.991087 480419 0.975197 0.993444 0.832146 24278 1 76 0.00220149 381 0 1.3741e+08 0.024529 1.4596e+06 1.38317e+08 1.05408e+07 24302 6.83912e+07 0 0.143051 0.993444 0.82669 1.3741e+08 0.00282941 2.94714e+07 1.46493e+07 2.97913e+07 352 2.97412e+07 2.30148e+07 0.00251471 2.9827e+07 50.072 0.0105525 0.9958 0 50.2699 GTEX-W5WG-1626-SM-4LMKG 1 B1 6 pieces ~5x4mm. Squamous mucosa well preserved, about ~20 total volume (fragments are enfolded) 9.6 Esophagus Esophagus - Mucosa 0006920 259 1088 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990426 290140 0.975671 0.992996 0.836938 21105 1 76 0.00226961 129 0 5.94455e+07 0.0240154 432432 5.98648e+07 4.30571e+06 21120 2.9569e+07 0 0.138733 0.992996 0.831076 5.94455e+07 0.00299948 1.32926e+07 8.17046e+06 1.33851e+07 137 1.34293e+07 1.22997e+07 0.0026336 1.33973e+07 49.9403 0.00722348 0.995567 0 50.1734 GTEX-W5WG-1726-SM-4LMI5 1 B1 6 pieces '~7x2mm. Mucosa variably preserved (1-2), ~30-40% of thickness 6.3 Stomach Stomach 0000945 262 1085 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.962875 204712 0.98668 0.965899 0.87878 21035 1 76 0.00229621 418 0 8.53231e+07 0.0130088 1.07845e+06 8.83353e+07 6.89955e+06 21050 4.23981e+07 0 0.107901 0.965899 0.848813 8.53231e+07 0.00310404 1.98856e+07 1.54167e+08 2.03062e+07 298 2.03345e+07 2.63598e+07 0.00269886 2.0111e+07 49.7236 0.0122086 0.968924 0 50.5232 GTEX-W5WG-1826-SM-4KL2Y 0 B1 6 pieces ~7x3mm. Squamous epithelium is ~1-2% of thickness. ~20% of dermis contains intermingled fat, areas of extreme separation noted 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 266 1082 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.990614 434861 0.969139 0.99255 0.816415 24100 1 76 0.00234111 225 0 9.40178e+07 0.0306121 603605 9.47235e+07 8.01955e+06 24123 4.67823e+07 0 0.152724 0.99255 0.810333 9.40178e+07 0.00352032 2.0496e+07 1.14948e+07 2.07072e+07 253 2.06865e+07 1.54847e+07 0.00292956 2.06985e+07 50.0145 0.00637228 0.994486 0 50.2563 GTEX-W5WG-1926-SM-4KKZK 0 B1 2 pieces ~10x8mm. Minimal interstitial fat. 8 Muscle Muscle - Skeletal 0011907 272 1076 BP-27175 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3626 08/10/2013 TruSeq.v1 RNASEQ 0.99189 355298 0.982629 0.993969 0.87674 20078 1 76 0.00219065 273 0 9.57704e+07 0.017162 1.63562e+06 9.63515e+07 8.21584e+06 20086 4.76878e+07 0 0.105888 0.993969 0.871452 9.57704e+07 0.00315379 2.10893e+07 1.68806e+07 2.13661e+07 309 2.12605e+07 1.77595e+07 0.00267122 2.13658e+07 50.1235 0.0169755 0.996047 0 50.326 GTEX-W5WG-2026-SM-4LMIB 1 B1 6 pieces ~7x4mm, mainly muscularis, ~10 mucosa present, moderately preserved 7 Colon Colon - Sigmoid 0001159 277 1072 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.987194 321408 0.969625 0.990462 0.773781 23270 1 76 0.00263045 148 0 6.25804e+07 0.0294518 547523 6.31831e+07 4.94434e+06 23296 3.10619e+07 0 0.195844 0.990462 0.7664 6.25804e+07 0.00346586 1.38658e+07 7.53384e+06 1.39521e+07 151 1.40041e+07 8.78218e+06 0.00304678 1.40095e+07 50.0096 0.00866566 0.99373 0 50.1551 GTEX-W5WG-2226-SM-4LMI3 0 B1 2 pieces ~2.5mm d. Excellent clean specimens 7.8 Blood Vessel Artery - Tibial 0007610 285 1064 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.986565 493148 0.972275 0.98989 0.835418 21137 1 76 0.00220298 170 0 8.00593e+07 0.0273485 386870 8.0877e+07 6.43262e+06 21158 3.97708e+07 0 0.136856 0.98989 0.826973 8.00593e+07 0.00313502 1.70067e+07 5.87265e+06 1.72399e+07 191 1.7278e+07 1.52127e+07 0.00266744 1.72186e+07 49.914 0.00478344 0.993216 0 50.3404 GTEX-W5WG-2326-SM-3GIJH 0 B1 2 pieces ~4mm d. Excellent clean specimens. 7.8 Nerve Nerve - Tibial 0001323 286 1064 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.858165 151386 0.968586 0.860515 0.753741 22569 1 76 0.00248918 160 0 7.00925e+07 0.0310583 278427 8.14541e+07 6.30134e+06 22609 3.47926e+07 0 0.214845 0.860515 0.648606 7.00925e+07 0.00714503 1.53348e+07 5.02558e+06 1.55319e+07 163 1.54841e+07 1.0381e+07 0.00481075 1.55638e+07 50.1283 0.00341821 0.862865 0 50.3194 GTEX-W5WG-2426-SM-4LMI6 1 B1 6 pieces ~6x5mm. Muscosa <~ 10% of thickness 7.6 Colon Colon - Transverse 0001157 289 1061 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.985952 369536 0.974159 0.989696 0.820026 23185 1 76 0.00279628 210 0 8.0522e+07 0.0243416 1.55020e+06 8.13604e+07 6.58558e+06 23213 3.99393e+07 0 0.154133 0.989696 0.811577 8.0522e+07 0.0036665 1.78292e+07 1.09107e+07 1.80081e+07 217 1.80439e+07 1.14427e+07 0.00322974 1.80676e+07 50.0328 0.0190536 0.99344 0 50.2496 GTEX-W5WG-2526-SM-4SOJ2 1 B1 2 pieces ~10x9mm. 5.7 Adipose Tissue Adipose - Subcutaneous 0002190 293 1058 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990804 337195 0.971986 0.993213 0.802849 22269 1 76 0.00222221 144 0 6.33991e+07 0.0277851 598023 6.38323e+07 3.52622e+06 22285 3.15327e+07 0 0.169137 0.993213 0.7974 6.33991e+07 0.00284541 1.3894e+07 6.92472e+06 1.40538e+07 161 1.40251e+07 9.41285e+06 0.00253305 1.40717e+07 50.083 0.00936865 0.995623 0 50.286 GTEX-W5WG-2726-SM-4LMIC 1 B1 6 6pieces ~9x3mm, all muscle, no muscosa 7.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 304 1048 BP-27181 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989746 568072 0.969144 0.992632 0.843053 21805 1 76 0.00216654 194 0 7.63606e+07 0.0306463 865952 7.69274e+07 5.92251e+06 21820 3.79601e+07 0 0.12609 0.992632 0.836842 7.63606e+07 0.00294999 1.62797e+07 1.14108e+07 1.64264e+07 208 1.63974e+07 1.20812e+07 0.00255712 1.65293e+07 50.2002 0.0112567 0.995517 0 50.2243 GTEX-W5X1-0001-SM-3P61V B1 9.3 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -1133 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952412 764687 0.96639 0.973883 0.812969 22000 1 76 0.00329316 222 0 1.0537e+08 0.0331152 742297 1.08195e+08 1.42779e+07 22033 5.14006e+07 0 0.153421 0.973883 0.791736 1.0537e+08 0.00453387 2.27568e+07 1.93321e+07 2.28877e+07 249 2.39251e+07 2.40438e+07 0.00389984 2.37972e+07 49.866 0.0068607 0.995353 0 50.1434 GTEX-W5X1-0002-SM-3G3S7 B1 Blood Whole Blood 0013756 -1133 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003023_R02C01 GTEX-W5X1-0002-SM-3G3T8 B1 Blood Whole Blood 0013756 -1133 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R02C01 GTEX-W5X1-0002-SM-3USSL B1 Blood Whole Blood 0013756 -1133 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-W5X1-0002-SM-5URBS B1 Blood Whole Blood 0013756 -1133 BP-26038 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/07/2012 LCSET-5270,LCSET-5436 07/05/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-W5X1-0006-SM-3GIJZ B1 8.6 Blood Whole Blood 0013756 -1133 BP-26073 RNA isolation_PAXgene Blood RNA (Manual) 06/08/2012 LCSET-2024 09/11/2012 TruSeq.v1 RNASEQ 0.845606 393491 0.957879 0.848018 0.797837 19716 1 76 0.00293232 134 0 6.21528e+07 0.0416553 180358 7.32918e+07 6.73731e+06 19723 3.0853e+07 0 0.160041 0.848018 0.676581 6.21528e+07 0.00783308 1.36992e+07 3.94572e+07 1.3815e+07 141 1.38171e+07 1.34379e+07 0.00537573 1.38943e+07 50.1392 0.00246082 0.85043 0 50.2104 GTEX-W5X1-0008-SM-4LMKA B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 365 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990158 565701 0.975398 0.993052 0.842272 20686 1 76 0.00216257 157 0 7.30817e+07 0.024265 262241 7.3593e+07 5.70322e+06 20706 3.6339e+07 0 0.133126 0.993052 0.83642 7.30817e+07 0.00281462 1.61713e+07 9.65011e+06 1.63102e+07 150 1.64184e+07 1.80336e+07 0.00248764 1.6271e+07 49.7746 0.0035634 0.995947 0 50.2137 GTEX-W5X1-0426-SM-3GILB 1 B1 2 pieces, 9x8 & 10x8mm. Good uniform parenchyma. 6.9 Thyroid Thyroid 0002046 209 1037 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.703574 195695 0.952744 0.70961 0.686049 24116 1 76 0.00247649 107 0 5.67377e+07 0.0469481 199131 7.99563e+07 8.2762e+06 24155 2.80163e+07 0 0.266695 0.70961 0.486827 5.67377e+07 0.0130415 1.207e+07 9.10843e+06 1.21615e+07 119 1.23415e+07 7.58842e+06 0.00771405 1.2324e+07 49.9647 0.0024905 0.715645 0 50.1887 GTEX-W5X1-0526-SM-3GILH 1 B1 2 pieces, 11x7 & 8x8mm. Heart failure cells. Focal interstitial fibrosis. 8.3 Lung Lung 0008952 215 1031 BP-27179 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.727975 228083 0.966427 0.732645 0.745462 24651 1 76 0.00254853 120 0 6.90979e+07 0.0329677 374346 9.43129e+07 8.71765e+06 24683 3.41588e+07 0 0.220964 0.732645 0.546159 6.90979e+07 0.0129072 1.50778e+07 1.02259e+07 1.52712e+07 133 1.54089e+07 1.07436e+07 0.00769486 1.53461e+07 49.8978 0.00396919 0.737315 0 50.3187 GTEX-W5X1-0826-SM-3GILN 1 B1 2 pieces, 11x8 & 10x9mm; slight edema 6.5 Heart Heart - Atrial Appendage 0006631 231 1015 BP-27181 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.938737 209293 0.979941 0.943674 0.851152 22008 1 76 0.00322642 172 0 1.02665e+08 0.0197245 2.22091e+06 1.08793e+08 9.88663e+06 22022 5.09147e+07 0 0.128789 0.943674 0.80321 1.02665e+08 0.0138546 2.11142e+07 1.92291e+07 2.15869e+07 221 2.15012e+07 1.2581e+07 0.00851271 2.15052e+07 50.0045 0.020414 0.94861 0 50.5534 GTEX-W5X1-1426-SM-3GIKH 1 B1 2 pieces, 12x9.5 & 12x8mm; well fixed 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 268 978 BP-27181 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.804748 256223 0.96088 0.809935 0.803146 21036 1 76 0.0025964 116 0 4.22587e+07 0.0388422 816287 5.21755e+07 4.4064e+06 21046 2.09325e+07 0 0.157734 0.809935 0.650496 4.22587e+07 0.0135502 9.04179e+06 1.19888e+07 9.24269e+06 127 9.31257e+06 6.71352e+06 0.00803824 9.20982e+06 49.7227 0.015645 0.815122 0 50.5494 GTEX-W5X1-2326-SM-3GIL6 1 B1 2 pieces, 13x9 & 11x6mm; atrophic glands in fibroadipose tissue 6.9 Breast Breast - Mammary Tissue 0008367 334 912 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.966646 569338 0.967852 0.973166 0.762432 25353 1 76 0.00231865 159 0 9.60665e+07 0.0317741 378954 9.87154e+07 7.10776e+06 25399 4.75124e+07 0 0.205419 0.973166 0.741973 9.60665e+07 0.0127228 2.05805e+07 1.04767e+07 2.10371e+07 194 2.1151e+07 1.45264e+07 0.00748588 2.10549e+07 49.8862 0.00383886 0.979686 0 50.5485 GTEX-W5X1-2526-SM-3GILC 1 B1 7 pieces, up to 10.5x3.5mm; most subcutaneous adipose trimmed; 1 piece has <1mm adipose 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 344 902 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.757748 229383 0.970365 0.762376 0.80303 22647 1 76 0.00251267 144 0 6.11816e+07 0.0293917 332607 8.02512e+07 1.80723e+07 22661 3.03023e+07 0 0.167335 0.762376 0.612211 6.11816e+07 0.0132505 1.31439e+07 9.44082e+06 1.33475e+07 140 1.34292e+07 9.84213e+06 0.00784897 1.34036e+07 49.9524 0.00414457 0.767005 0 50.3843 GTEX-W5X1-2626-SM-4LMI8 1 B1 2 pieces, 16x9 & 11x9mm; 20% fibroadipose, rest is adipose 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 354 892 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.986937 315841 0.974118 0.990114 0.796943 23313 1 76 0.00266163 147 0 7.10952e+07 0.025581 348966 7.18051e+07 5.76536e+06 23336 3.5325e+07 0 0.177174 0.990114 0.789064 7.10952e+07 0.0034808 1.55921e+07 7.4561e+06 1.57296e+07 162 1.57831e+07 1.21789e+07 0.0030699 1.57569e+07 49.9584 0.0048599 0.99329 0 50.2194 GTEX-W5X1-2826-SM-3GILM 1 B1 2 pieces, 9x5 & 8x5.5mm; 1 with 60% external adipose; 1 with 40% external adipose 6.4 Nerve Nerve - Tibial 0001323 359 887 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.885728 261647 0.96173 0.890708 0.726202 25262 1 76 0.00252075 156 0 8.93225e+07 0.0380396 361985 1.00283e+08 1.03068e+07 25311 4.42422e+07 0 0.235528 0.890708 0.646834 8.93225e+07 0.0131343 1.93199e+07 1.03964e+07 1.95064e+07 174 1.96072e+07 1.1765e+07 0.00779785 1.96713e+07 50.0816 0.00360965 0.895688 0 50.2402 GTEX-W5X1-3026-SM-EAZAX 1 B1 6 pieces, up to 8x3mm; subcutaneous adipose well trimmed 5.5 Skin Skin - Sun Exposed (Lower leg) 0004264 365 881 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.983927 294909 0.978771 0.984963 0.865574 22005 1 76 0.00241776 178 0 7.62417e+07 0.0210405 441993 7.74057e+07 6.35969e+06 22015 3.79772e+07 0 0.113197 0.984963 0.852558 7.62417e+07 0.00363577 1.67449e+07 9.43181e+06 1.69142e+07 186 1.68177e+07 1.47354e+07 0.00302612 1.69179e+07 50.1485 0.00571009 0.985998 0 50.2515 GTEX-WCDI-0001-SM-3PYKQ B1 Blood Whole Blood 0013756 -1064 BP-26270 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R05C01 GTEX-WCDI-0001-SM-3PZ7A B1 Blood Whole Blood 0013756 -1064 BP-26270 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340006_R01C01 GTEX-WCDI-0001-SM-4X62J B1 Blood Whole Blood 0013756 -1064 BP-26270 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WCDI-0001-SM-5SOE7 B1 Blood Whole Blood 0013756 -1064 BP-26270 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/15/2012 LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WCDI-0002-SM-3P61U B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -1064 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951284 917265 0.963073 0.973087 0.797359 22874 1 76 0.00347343 221 0 1.06452e+08 0.0359469 592447 1.09396e+08 1.40736e+07 22911 5.18705e+07 0 0.165714 0.973087 0.7759 1.06452e+08 0.00478311 2.29339e+07 1.94778e+07 2.30946e+07 221 2.41623e+07 2.43266e+07 0.0041136 2.39966e+07 49.8279 0.00541562 0.99489 0 50.1746 GTEX-WCDI-0005-SM-3NB2M B1 8.4 Blood Whole Blood 0013756 -1064 BP-26331 RNA isolation_PAXgene Blood RNA (Manual) 06/18/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.977496 1.59844e+06 0.946267 0.981913 0.785926 21243 1 76 0.00446556 163 0 1.14441e+08 0.0526378 429379 1.1655e+08 2.04678e+07 21261 5.67248e+07 0 0.160341 0.981913 0.771711 1.14441e+08 0.00629745 2.49821e+07 1.29137e+08 2.54252e+07 193 2.55987e+07 2.55555e+07 0.00537738 2.5365e+07 49.7707 0.00368409 0.98633 0 50.4395 GTEX-WCDI-0008-SM-47JYE B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 95 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988337 483036 0.980205 0.992279 0.862502 20260 1 76 0.00236224 159 0 7.49272e+07 0.0194564 194112 7.55102e+07 8.53193e+06 20268 3.72238e+07 0 0.117703 0.992279 0.855843 7.49272e+07 0.00285639 1.68016e+07 9.08689e+06 1.67687e+07 159 1.69197e+07 1.89052e+07 0.00260834 1.69374e+07 50.0262 0.00257067 0.996222 0 49.951 GTEX-WCDI-0426-SM-4GIAL 0 B1 2 pieces ~6x4mm. Arteries encircled, adherent fibroadipose tissue present on both, ~30% of both 6.3 Blood Vessel Artery - Tibial 0007610 131 1353 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987529 376504 0.977717 0.990867 0.841203 21844 1 76 0.00255008 158 0 7.52021e+07 0.0218374 276395 7.58953e+07 7.43518e+06 21863 3.73599e+07 0 0.136514 0.990867 0.83352 7.52021e+07 0.00433827 1.63041e+07 6.31295e+06 1.64113e+07 174 1.64445e+07 1.41632e+07 0.00344116 1.65152e+07 50.1074 0.00364179 0.994205 0 50.1638 GTEX-WEY5-0001-SM-3P61Z B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1274 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.95206 1.12448e+06 0.962052 0.973523 0.808478 23021 1 76 0.00330331 285 0 1.1666e+08 0.0374932 780173 1.19833e+08 1.62e+07 23054 5.69176e+07 0 0.153574 0.973523 0.787072 1.1666e+08 0.00455562 2.52014e+07 2.32572e+07 2.52711e+07 278 2.64171e+07 2.67447e+07 0.00391566 2.63511e+07 49.9375 0.0065105 0.994986 0 50.069 GTEX-WEY5-0003-SM-3G3SD B1 Blood Whole Blood 0013756 1275 BP-26394 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/19/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003082_R03C01 GTEX-WEY5-0003-SM-3G3TE B1 Blood Whole Blood 0013756 1275 BP-26394 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/19/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R05C02 GTEX-WEY5-0003-SM-3UZET B1 Blood Whole Blood 0013756 1275 BP-26394 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/19/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WEY5-0003-SM-5URDM B1 Blood Whole Blood 0013756 1275 BP-26394 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/19/2012 LCSET-5270,LCSET-5380 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WEY5-0006-SM-3GIKG B1 8.2 Blood Whole Blood 0013756 1273 BP-26396 RNA isolation_PAXgene Blood RNA (Manual) 06/19/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.843585 528306 0.958679 0.848268 0.796912 17048 1 76 0.00224886 106 0 6.09763e+07 0.040638 193429 7.18834e+07 6.09043e+06 17051 3.01598e+07 0 0.161767 0.848268 0.675995 6.09763e+07 0.0136098 1.37263e+07 6.19614e+07 1.38412e+07 133 1.3984e+07 1.37113e+07 0.00789795 1.3933e+07 49.9087 0.00269087 0.852951 0 50.2084 GTEX-WEY5-0008-SM-4LMKC B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 279 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990144 449614 0.975399 0.992916 0.840923 20260 1 76 0.00206515 145 0 5.80969e+07 0.0242381 166720 5.85114e+07 4.62883e+06 20275 2.88909e+07 0 0.134477 0.992916 0.834965 5.80969e+07 0.00266433 1.29156e+07 7.15369e+06 1.29887e+07 126 1.30979e+07 1.37515e+07 0.00236391 1.29635e+07 49.7421 0.00284936 0.995688 0 50.1412 GTEX-WEY5-0226-SM-3GIKN 1 B1 2 pieces, 9x6 & 9x8mm; 20-30% surrounding adipose; should try to trim this 8.2 Heart Heart - Atrial Appendage 0006631 199 749 BP-27183 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.806827 86530 0.97949 0.811496 0.859948 20095 1 76 0.00232195 101 0 5.46025e+07 0.0202456 1.1817e+06 6.72863e+07 6.06387e+06 20106 2.70731e+07 0 0.119542 0.811496 0.697845 5.46025e+07 0.0130631 1.17555e+07 6.74103e+06 1.20742e+07 124 1.20186e+07 7.70663e+06 0.00766163 1.20298e+07 50.0234 0.0175622 0.816165 0 50.6687 GTEX-WEY5-0326-SM-4LMI7 1 B1 2 pieces, 5x3 & 4x4mm; 1 with 20% plaque; both have ~30% adipose, see image 7.3 Blood Vessel Artery - Coronary 0001621 204 744 BP-27183 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989421 326540 0.973888 0.992054 0.826754 22584 1 76 0.00233046 159 0 7.32343e+07 0.0258748 427710 7.38209e+07 5.41366e+06 22602 3.64155e+07 0 0.147134 0.992054 0.820184 7.32343e+07 0.00320294 1.61039e+07 7.27472e+06 1.63032e+07 181 1.6313e+07 1.21334e+07 0.00276554 1.62815e+07 49.9517 0.00579389 0.994686 0 50.3075 GTEX-WEY5-0426-SM-3GIKT 1 B1 2 pieces, 9x6 & 7x6mm; good specimen 8.7 Heart Heart - Left Ventricle 0006566 206 740 BP-27183 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.580533 172243 0.97757 0.58494 0.859296 18731 1 76 0.00243085 90 0 4.51395e+07 0.0222399 1.09005e+06 7.71696e+07 1.00197e+07 18738 2.23176e+07 0 0.118275 0.58494 0.502636 4.51395e+07 0.0132966 9.72814e+06 1.0876e+07 9.95552e+06 109 9.97572e+06 6.36e+06 0.00782278 9.94269e+06 49.9171 0.0141254 0.589346 0 50.5776 GTEX-WEY5-0526-SM-3GIKZ 1 B1 2 pieces, 10x9 & 7x5mm; 10-20% peripheral adipose and stroma 7.4 Thyroid Thyroid 0002046 213 734 BP-27183 RNA isolation_PAXgene Tissue miRNA 07/10/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.810621 105093 0.967774 0.816124 0.776092 23864 1 76 0.00209098 115 0 6.71436e+07 0.0320068 278385 8.22714e+07 8.04916e+06 23891 3.32461e+07 0 0.191682 0.816124 0.633387 6.71436e+07 0.0126837 1.46314e+07 6.2642e+06 1.45781e+07 131 1.47038e+07 9.7749e+06 0.00735162 1.49128e+07 50.3529 0.00338374 0.821626 0 49.9088 GTEX-WEY5-0626-SM-4LMIA 1 B1 2 pieces, 9x7 & 11x7mm; ova and follicles present 8 Ovary Ovary 0000992 217 728 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.98879 365421 0.972106 0.99202 0.801062 22558 1 76 0.00218345 134 0 6.4767e+07 0.0276265 198036 6.52880e+07 4.80952e+06 22584 3.21838e+07 0 0.171043 0.99202 0.79467 6.4767e+07 0.00319452 1.40719e+07 5.07098e+06 1.42169e+07 152 1.42617e+07 1.13066e+07 0.00268734 1.42296e+07 49.9438 0.00303327 0.99525 0 50.2562 GTEX-WEY5-0726-SM-4LMID 1 B1 2 pieces, 8x8 & 8x7mm; all myometrium, no endometrium in these sections 8.4 Uterus Uterus 0000995 221 722 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989696 387337 0.971207 0.992675 0.824473 22483 1 76 0.00220968 170 0 7.35395e+07 0.0284191 165737 7.40822e+07 5.67458e+06 22501 3.65618e+07 0 0.146734 0.992675 0.818434 7.35395e+07 0.00295746 1.59337e+07 6.53837e+06 1.60617e+07 172 1.61249e+07 1.38241e+07 0.00258245 1.60794e+07 49.9294 0.00223721 0.995655 0 50.2 GTEX-WEY5-0826-SM-4LMIH 1 B1 6 pieces, up to 9x4mm; good specimen 7.1 Vagina Vagina 0000996 228 729 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988519 375311 0.970343 0.991531 0.830749 22979 1 76 0.00230161 174 0 7.7474e+07 0.0293631 312964 7.81357e+07 6.06748e+06 23000 3.85036e+07 0 0.139594 0.991531 0.823714 7.7474e+07 0.00326637 1.67991e+07 7.64190e+06 1.69676e+07 194 1.69751e+07 1.32925e+07 0.00278253 1.70201e+07 50.0661 0.00400539 0.994544 0 50.2495 GTEX-WEY5-0926-SM-4LMI4 1 B1 4 pieces, up to 5.5 x 3mm; well sampled 8.9 Esophagus Esophagus - Mucosa 0006920 236 717 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990304 441731 0.97695 0.992917 0.847282 22436 1 76 0.00223911 162 0 7.45861e+07 0.0226751 375803 7.51182e+07 5.76307e+06 22455 3.70748e+07 0 0.129668 0.992917 0.84128 7.45861e+07 0.00314578 1.63824e+07 7.98282e+06 1.65676e+07 173 1.66181e+07 1.53702e+07 0.00269125 1.6523e+07 49.8566 0.00500282 0.995529 0 50.281 GTEX-WEY5-1026-SM-4LMK9 1 B1 6 pieces, up to 8x5mm; well sampled 8.7 Esophagus Esophagus - Muscularis 0004648 238 714 BP-27205 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989862 393056 0.977045 0.992777 0.854796 20812 1 76 0.00222462 144 0 6.63212e+07 0.0226497 381317 6.68037e+07 5.24555e+06 20822 3.29772e+07 0 0.122249 0.992777 0.848622 6.63212e+07 0.00291307 1.42111e+07 6.31405e+06 1.43502e+07 156 1.43841e+07 1.2664e+07 0.00256784 1.43624e+07 49.9622 0.00570802 0.995692 0 50.2435 GTEX-WEY5-1126-SM-4LMIE 1 B1 6 pieces, up to 10x6mm; 2 have squamous mucosa 6.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 246 706 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990083 331026 0.973518 0.992814 0.821751 21479 1 76 0.00236572 202 0 8.08736e+07 0.0262841 694875 8.1459e+07 6.035e+06 21497 4.0216e+07 0 0.151768 0.992814 0.815845 8.08736e+07 0.00325871 1.74034e+07 7.96361e+06 1.75578e+07 209 1.75187e+07 1.23788e+07 0.00281099 1.76547e+07 50.1934 0.00853037 0.995545 0 50.2209 GTEX-WEY5-1226-SM-4LMIQ 1 B1 6 pieces, up to 12x6mm; good oxyntic mucosa; well preserved 7.1 Stomach Stomach 0000945 253 698 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.980755 289399 0.982258 0.983655 0.865147 22263 1 76 0.0023867 372 0 9.17355e+07 0.0171314 531561 9.32598e+07 7.11742e+06 22279 4.5582e+07 0 0.117111 0.983655 0.851006 9.17355e+07 0.00326499 2.10735e+07 1.15573e+08 2.13097e+07 280 2.13846e+07 2.5244e+07 0.00282455 2.12635e+07 49.858 0.00569978 0.986554 0 50.2786 GTEX-WEY5-1326-SM-3GILS 1 B1 2 pieces, 12x8 & 12x10mm; 1 with large 6 mm central hole; 1 without defects 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 247 703 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.577457 109980 0.971094 0.584616 0.818266 21035 1 76 0.00222515 109 0 4.2791e+07 0.028668 227356 7.3195e+07 9.02355e+06 21046 2.10518e+07 0 0.152828 0.584616 0.478372 4.2791e+07 0.0135309 9.22845e+06 5.47833e+06 9.41553e+06 112 9.61666e+06 7.04493e+06 0.0078088 9.50302e+06 49.7028 0.00310617 0.591775 0 50.5017 GTEX-WEY5-1426-SM-4LMJ3 2 B1 6 pieces, up to 10x3mm; mucosa moderately autolyzed; muscle slightly autolyzed 7.9 Colon Colon - Transverse 0001157 251 699 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990522 410522 0.976971 0.993153 0.841471 21978 1 76 0.00225694 172 0 7.56013e+07 0.0227554 539584 7.61225e+07 5.73492e+06 21991 3.75956e+07 0 0.1355 0.993153 0.835709 7.56013e+07 0.00317693 1.65221e+07 7.85122e+06 1.665e+07 190 1.66686e+07 1.30947e+07 0.00271572 1.66978e+07 50.0437 0.00708836 0.995783 0 50.1928 GTEX-WEY5-1526-SM-4LMJF 1 B1 6 pieces, up to 9x2mm; 2 of 6 have good lymphoid tissue (slightly autolyzed); 3 have focal lymphoid nodules; all have muscle 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 271 685 BP-27495 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989953 377898 0.97206 0.99286 0.814133 24045 1 76 0.00235644 171 0 7.84562e+07 0.0275821 379729 7.90204e+07 6.05748e+06 24072 3.90143e+07 0 0.157927 0.99286 0.808321 7.84562e+07 0.00307907 1.71248e+07 8.60788e+06 1.72567e+07 191 1.73302e+07 1.32867e+07 0.0027167 1.72711e+07 49.9146 0.00480545 0.995768 0 50.1918 GTEX-WEY5-1926-SM-3GIL8 1 B1 2 pieces, 8x8 & 8x7.5mm; small hollow artifacts, not centrally unfixed 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 283 669 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.946588 560028 0.962476 0.95196 0.794587 23180 1 76 0.00220645 164 0 9.10631e+07 0.0372802 485352 9.56586e+07 8.26953e+06 23214 4.51262e+07 0 0.167889 0.95196 0.756415 9.10631e+07 0.0130372 1.95955e+07 1.86077e+07 1.98619e+07 190 1.99688e+07 1.41521e+07 0.00759126 1.99566e+07 49.9848 0.0050738 0.957332 0 50.3376 GTEX-WEY5-2026-SM-3GILE 1 B1 2 pieces, 10x7 & 9x7mm; no extraneous tissue 6.3 Muscle Muscle - Skeletal 0011907 290 661 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-2025 09/11/2012 TruSeq.v1 EXCLUDE 0.290606 37798 0.978752 0.293171 0.878096 15817 1 76 0.00250426 105 0 2.10489e+07 0.0211196 309144 7.17974e+07 8.80821e+06 15818 1.03396e+07 0 0.100655 0.293171 0.257433 2.10489e+07 0.0140372 4.53457e+06 3.16823e+06 4.74029e+06 122 4.77093e+06 2.82426e+06 0.00822029 4.65192e+06 49.3685 0.00430579 0.295736 0 51.109 GTEX-WEY5-2026-SM-5SI8D 1 B1 2 pieces, 10x7 & 9x7mm; no extraneous tissue 6.3 Muscle Muscle - Skeletal 0011907 290 661 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990247 281218 0.982661 0.993469 0.873289 18410 1 76 0.00228169 162 0 6.7983e+07 0.0172038 982017 6.84299e+07 6.29768e+06 18415 3.38108e+07 0 0.109371 0.993469 0.867586 6.7983e+07 0.00362293 1.49972e+07 1.34747e+07 1.49633e+07 187 1.48792e+07 1.03721e+07 0.00295013 1.52756e+07 50.6572 0.0143507 0.996692 0 49.9435 GTEX-WEY5-2026-SM-CYPRC 1 B1 2 pieces, 10x7 & 9x7mm; no extraneous tissue 6.3 Muscle Muscle - Skeletal 0011907 290 661 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.99361 689877 0.984173 0.994965 0.877739 21763 1 76 0.00364257 382 0 2.11752e+08 0.0156709 3.39319e+06 2.12823e+08 1.88615e+07 21778 1.05542e+08 0 0.106434 0.994965 0.87332 2.11752e+08 0.00532285 4.64844e+07 3.81153e+07 4.71739e+07 427 4.70212e+07 3.20704e+07 0.00448157 4.6846e+07 49.9067 0.0159437 0.996321 0 50.3681 GTEX-WEY5-2126-SM-3GILK 1 B1 2 pieces, 3x2 & 3.5x3mm; so stroma, no lesions except for a minute calification 7.5 Blood Vessel Artery - Tibial 0007610 292 658 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.927637 175410 0.971158 0.931865 0.835101 21226 1 76 0.0020457 157 0 8.88915e+07 0.0284765 602295 9.5391e+07 6.78669e+06 21249 4.40706e+07 0 0.136056 0.931865 0.778201 8.88915e+07 0.0124315 1.88866e+07 6.9457e+06 1.91351e+07 195 1.91264e+07 1.51189e+07 0.00721506 1.92477e+07 50.158 0.00631396 0.936092 0 50.3267 GTEX-WEY5-2226-SM-3GILQ 0 B1 2 pieces, 4x3 & 4x3mm; well trimmed nerves 6.5 Nerve Nerve - Tibial 0001323 294 653 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.897143 198437 0.96026 0.903209 0.75041 23515 1 76 0.00220999 138 0 7.11882e+07 0.0395161 408022 7.8817e+07 7.18830e+06 23547 3.52345e+07 0 0.209849 0.903209 0.677777 7.11882e+07 0.0129979 1.54096e+07 8.66456e+06 1.56104e+07 150 1.5724e+07 9.6015e+06 0.00756772 1.57337e+07 50.0153 0.00517683 0.909275 0 50.3237 GTEX-WEY5-2326-SM-3GIKK 1 B1 6 pieces, up to 9x4mm; well trimmed subcutaneous fat 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 299 649 BP-27394 RNA isolation_PAXgene Tissue miRNA 07/13/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.58578 101191 0.965121 0.589964 0.791184 21415 1 76 0.00260175 141 0 4.02092e+07 0.0346964 405860 6.81554e+07 1.59169e+07 21436 1.98558e+07 0 0.173938 0.589964 0.46677 4.02092e+07 0.0138419 8.75304e+06 5.88228e+06 8.83419e+06 147 8.88686e+06 5.82868e+06 0.00818195 8.95944e+06 50.2033 0.00595492 0.594148 0 50.2307 GTEX-WFG7-0001-SM-3P61S B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -104 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952527 669031 0.971583 0.974202 0.849791 21701 1 76 0.00298406 282 0 1.08215e+08 0.0279473 444641 1.11081e+08 1.4822e+07 21725 5.2797e+07 0 0.121791 0.974202 0.827868 1.08215e+08 0.00429373 2.36871e+07 1.87587e+07 2.38515e+07 274 2.49597e+07 2.71083e+07 0.00362433 2.47654e+07 49.8047 0.00400285 0.995878 0 50.1729 GTEX-WFG7-0002-SM-3G3SI B1 Blood Whole Blood 0013756 -104 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003082_R04C01 GTEX-WFG7-0002-SM-3G3TJ B1 Blood Whole Blood 0013756 -104 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R06C02 GTEX-WFG7-0002-SM-4X61R B1 Blood Whole Blood 0013756 -104 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WFG7-0002-SM-5SOEQ B1 Blood Whole Blood 0013756 -104 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 LCSET-5226,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WFG7-0005-SM-3GIKM B1 8.5 Blood Whole Blood 0013756 -104 BP-26514 RNA isolation_PAXgene Blood RNA (Manual) 06/21/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.835275 681893 0.942239 0.840484 0.771135 19814 1 76 0.00217677 120 0 7.10953e+07 0.0574324 470598 8.45885e+07 7.50046e+06 19841 3.52047e+07 0 0.171104 0.840484 0.648127 7.10953e+07 0.0132555 1.51483e+07 3.74302e+07 1.54136e+07 145 1.55336e+07 1.30569e+07 0.00768182 1.54391e+07 49.8474 0.00556338 0.845693 0 50.4341 GTEX-WFG7-0008-SM-4LMKB B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 249 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.989811 535099 0.975438 0.992784 0.836398 20742 1 76 0.00204239 162 0 7.0711e+07 0.0241591 162159 7.1225e+07 5.68232e+06 20758 3.51584e+07 0 0.13904 0.992784 0.830363 7.0711e+07 0.00260553 1.57703e+07 8.09118e+06 1.58468e+07 153 1.59904e+07 1.63882e+07 0.00232311 1.5831e+07 49.7495 0.00227671 0.995756 0 50.121 GTEX-WFG7-0326-SM-3GILI 1 B1 2 pieces ~11x8 mm 6.3 Thyroid Thyroid 0002046 104 638 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 EXCLUDE 0.23708 52493 0.963728 0.239229 0.786784 19348 1 76 0.00203925 114 0 1.74318e+07 0.0359814 97903 7.28665e+07 7.92792e+06 19356 8.53792e+06 0 0.176944 0.239229 0.188221 1.74318e+07 0.0134725 3.73552e+06 2.01064e+06 3.82474e+06 128 3.87245e+06 2.71911e+06 0.00770453 3.82993e+06 49.724 0.00134359 0.241377 0 50.59 GTEX-WFG7-0326-SM-5SI7L 1 B1 2 pieces ~11x8 mm 6.3 Thyroid Thyroid 0002046 104 638 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-4995 04/05/2014 TruSeq.v1 EXCLUDE 0.990993 275138 0.967394 0.993637 0.7884 23370 1 76 0.00184989 148 0 7.11087e+07 0.032315 352417 7.1564e+07 6.36054e+06 23398 3.53766e+07 0 0.178994 0.993637 0.783384 7.11087e+07 0.00310296 1.55207e+07 6.77196e+06 1.56446e+07 167 1.56348e+07 1.18114e+07 0.00247476 1.57113e+07 50.122 0.0049245 0.996282 0 50.1987 GTEX-WFG7-0326-SM-DKPO8 1 B1 2 pieces ~11x8 mm 6.3 Thyroid Thyroid 0002046 104 638 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.99213 364742 0.969304 0.994188 0.798409 24193 1 76 0.00271485 209 0 9.40103e+07 0.0303919 453687 9.45598e+07 9.85243e+06 24226 4.6815e+07 0 0.170895 0.994188 0.793769 9.40103e+07 0.00288288 2.05258e+07 8.67933e+06 2.07829e+07 240 2.08071e+07 1.65507e+07 0.00279869 2.06807e+07 49.8477 0.00479788 0.996247 0 50.3112 GTEX-WFG7-0426-SM-4LMK5 1 B1 2 pieces ~11x8mm. Extremely well-preserved, no adherent fat. Well visualized Islets, encircled 6.6 Pancreas Pancreas 0001150 109 633 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988987 323072 0.975225 0.992148 0.854298 21163 1 76 0.00228398 118 0 7.11991e+07 0.0245534 187933 7.17626e+07 5.52205e+06 21176 3.53942e+07 0 0.120927 0.992148 0.84759 7.11991e+07 0.00318711 1.61406e+07 1.49874e+07 1.63002e+07 126 1.63633e+07 1.93785e+07 0.00273411 1.631e+07 49.9183 0.00261882 0.995309 0 50.246 GTEX-WFG7-0526-SM-3GIKI 0 B1 2 pieces ~7x6mm Unusally well preserved, well visualized and preserved bronchial structures noted, encircled 8 Lung Lung 0008952 114 628 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.926227 170473 0.973972 0.931556 0.822193 22863 1 76 0.00202659 128 0 6.51982e+07 0.0256725 406375 6.99885e+07 5.7907e+06 22882 3.23093e+07 0 0.151779 0.931556 0.765919 6.51982e+07 0.0132252 1.43364e+07 5.72033e+06 1.45293e+07 149 1.4596e+07 1.14621e+07 0.00759388 1.46154e+07 50.0332 0.00580631 0.936885 0 50.3342 GTEX-WFG7-0626-SM-4LMK6 0 B1 2 pieces ~2mm d. Discontinuous rims of fat on both, up to 0.5mm. Minimal atherosis 7.1 Blood Vessel Artery - Coronary 0001621 122 620 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.987539 381471 0.973525 0.991379 0.848632 22073 1 76 0.00210272 273 0 9.18748e+07 0.0262068 522174 9.26738e+07 7.64274e+06 22093 4.56469e+07 0 0.124892 0.991379 0.841316 9.18748e+07 0.00295241 1.96541e+07 6.92356e+06 1.98979e+07 274 1.99265e+07 1.63766e+07 0.00252592 1.9958e+07 50.0395 0.00563454 0.995218 0 50.3082 GTEX-WFG7-0726-SM-3GIKO 0 B1 2 pieces ~8x7mm, Minimal ischemic changes 8.1 Heart Heart - Left Ventricle 0006566 126 616 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.946253 224257 0.98492 0.951625 0.875871 20197 1 76 0.00176784 152 0 8.15852e+07 0.0148666 1.57741e+06 8.57325e+07 6.64671e+06 20202 4.04569e+07 0 0.10905 0.951625 0.8335 8.15852e+07 0.0130483 1.78366e+07 1.04281e+07 1.80812e+07 195 1.80396e+07 1.31028e+07 0.00737626 1.82052e+07 50.2284 0.0183992 0.956996 0 50.3405 GTEX-WFG7-0826-SM-3GIKU 0 B1 2 pieces ~11x77 8.2 Heart Heart - Atrial Appendage 0006631 129 613 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.903338 275036 0.979598 0.908605 0.846072 22730 1 76 0.00176527 255 0 1.16432e+08 0.0201512 3.33648e+06 1.28144e+08 1.04008e+07 22744 5.77195e+07 0 0.133526 0.908605 0.768745 1.16432e+08 0.0129575 2.49969e+07 2.3142e+07 2.5654e+07 292 2.53587e+07 1.57525e+07 0.00732895 2.56842e+07 50.3188 0.026037 0.913872 0 50.6486 GTEX-WFG7-0926-SM-4LMK7 1 B1 6 pieces ~10x1.5mm 6.8 Blood Vessel Artery - Aorta 0001496 133 609 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.990687 352307 0.976176 0.993281 0.848657 22171 1 76 0.00203145 200 0 8.1115e+07 0.0235155 292891 8.16637e+07 5.76961e+06 22190 4.03515e+07 0 0.127519 0.993281 0.842955 8.1115e+07 0.00272247 1.77211e+07 6.04749e+06 1.78797e+07 210 1.79037e+07 1.50647e+07 0.00237606 1.79012e+07 49.9965 0.00358655 0.995875 0 50.2228 GTEX-WFG7-1026-SM-4LMK8 1 B1 6 pieces ~7x4mm 7 Esophagus Esophagus - Muscularis 0004648 144 598 BP-27213 RNA isolation_PAXgene Tissue miRNA 07/11/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988962 329783 0.978129 0.992277 0.864236 21346 1 76 0.00204476 207 0 7.99399e+07 0.0216405 892597 8.05621e+07 6.48085e+06 21358 3.97365e+07 0 0.113893 0.992277 0.857561 7.99399e+07 0.00294101 1.73101e+07 8.42008e+06 1.74571e+07 236 1.74454e+07 1.31264e+07 0.00249139 1.75715e+07 50.1801 0.0110796 0.995592 0 50.2114 GTEX-WFG7-1126-SM-4LMK3 0 B1 6 pieces ~6x1.5mm. Squamous mucosa is ~10% thickness 9.2 Esophagus Esophagus - Mucosa 0006920 150 592 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988887 337019 0.977171 0.992367 0.84994 21782 1 76 0.00220418 148 0 6.94136e+07 0.0223335 339401 6.99476e+07 5.33055e+06 21797 3.44882e+07 0 0.127232 0.992367 0.843452 6.94136e+07 0.00295392 1.55823e+07 8.3674e+06 1.56347e+07 161 1.57226e+07 1.44506e+07 0.00257773 1.57322e+07 50.0153 0.00485222 0.995846 0 50.0839 GTEX-WFG7-1226-SM-4LMK2 1 B1 6 pieces ~8x4mm. All muscle, no mucosa, excellent specimens 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 154 588 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.988206 352394 0.974275 0.991592 0.847395 21717 1 76 0.0020795 165 0 7.0138e+07 0.0255273 590490 7.07327e+07 5.4888e+06 21727 3.48596e+07 0 0.126879 0.991592 0.840271 7.0138e+07 0.00295722 1.52446e+07 7.69688e+06 1.54031e+07 192 1.53582e+07 1.10342e+07 0.00251686 1.55164e+07 50.2563 0.00834819 0.994979 0 50.2586 GTEX-WFG7-1326-SM-4LMK1 1 B1 7 pieces ~ ~6x1mm. Mucosa beatifully preserved, ~30-70% of thickness 7 Stomach Stomach 0000945 160 582 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3631 08/07/2013 TruSeq.v1 RNASEQ 0.985683 335787 0.981107 0.989243 0.85755 22007 1 76 0.00210966 257 0 7.33965e+07 0.0186534 579956 7.41946e+07 5.73301e+06 22021 3.64511e+07 0 0.123558 0.989243 0.848325 7.33965e+07 0.00309461 1.67503e+07 5.01762e+07 1.68886e+07 204 1.69645e+07 1.7122e+07 0.00260036 1.69309e+07 49.9504 0.00781669 0.992802 0 50.2056 GTEX-WFG7-1526-SM-4LVMG 1 B1 8 pieces ~10x1mm, Mucosa moderate well preserved, ~20-25% of thickness; some areas starting to degrade to autolysis score2 8.3 Colon Colon - Transverse 0001157 184 558 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989513 236151 0.973372 0.990335 0.820627 22541 1 76 0.00256859 147 0 6.05061e+07 0.0248481 587389 6.10966e+07 4.56103e+06 22559 3.00548e+07 0 0.152744 0.990335 0.812696 6.05061e+07 0.00326076 1.34974e+07 8.11336e+06 1.35895e+07 150 1.35624e+07 9.96378e+06 0.00291438 1.35712e+07 50.0163 0.0096141 0.991157 0 50.1701 GTEX-WFG7-1626-SM-4LVMF 1 B1 5 pieces ~6x3mm. All muscle, excellent specimens. 8 Colon Colon - Sigmoid 0001159 188 554 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991079 298891 0.976764 0.99196 0.85751 20199 1 76 0.00204094 140 0 5.87704e+07 0.0229831 325626 5.92468e+07 4.42444e+06 20210 2.92406e+07 0 0.119254 0.99196 0.850616 5.87704e+07 0.00268076 1.27323e+07 5.54848e+06 1.29096e+07 152 1.28569e+07 1.03836e+07 0.00236057 1.28418e+07 49.9707 0.0054961 0.992841 0 50.3458 GTEX-WFG7-1726-SM-4LVME 1 B1 6 pieces ~7x2.5mm. 50% show good lymphoid areas encircled up to ~20% of thickness. Still abundant muscle attached 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 192 550 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989942 280390 0.974526 0.99109 0.824639 22978 1 76 0.00220041 142 0 5.82084e+07 0.0250087 527949 5.87317e+07 4.27456e+06 22991 2.89387e+07 0 0.149888 0.99109 0.817291 5.82084e+07 0.00301894 1.28646e+07 6.16123e+06 1.29528e+07 153 1.29195e+07 9.26243e+06 0.0026092 1.2967e+07 50.0918 0.00898917 0.992238 0 50.1709 GTEX-WFG7-1826-SM-3GIL1 1 B1 2 pieces ~ 10x8mm. Diffuse glandular hyperplasia 8.2 Prostate Prostate 0002367 203 539 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.731889 218310 0.960476 0.736815 0.758193 24303 1 76 0.00213239 124 0 6.22431e+07 0.0391729 274775 8.44759e+07 7.91498e+06 24334 3.07984e+07 0 0.202283 0.736815 0.558648 6.22431e+07 0.0132552 1.34234e+07 8.42711e+06 1.36469e+07 132 1.37766e+07 9.30696e+06 0.00765663 1.36771e+07 49.8189 0.0032527 0.74174 0 50.4128 GTEX-WFG7-2026-SM-3GIL7 0 B1 6 pieces ~9x3mm. Squamous epithelium is ~2-3% thickness, prominent sebaceous glands noted representative ones encircled 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 215 527 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 EXCLUDE 0.295144 55616 0.965419 0.30002 0.832685 17490 1 76 0.00213519 132 0 1.57553e+07 0.0344288 211694 5.25142e+07 6.13289e+06 17494 7.69354e+06 0 0.132733 0.30002 0.249822 1.57553e+07 0.0140817 3.35429e+06 3.12672e+06 3.45431e+06 127 3.54429e+06 2.31225e+06 0.00801136 3.5018e+06 49.6984 0.00403118 0.304896 0 50.7345 GTEX-WFG7-2026-SM-5SI7P 0 B1 6 pieces ~9x3mm. Squamous epithelium is ~2-3% thickness, prominent sebaceous glands noted representative ones encircled 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 215 527 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-4995 04/05/2014 TruSeq.v1 RNASEQ 0.988235 514219 0.966308 0.991913 0.836383 22163 1 76 0.00192805 227 0 7.91093e+07 0.0334971 1.03812e+06 7.97543e+07 7.55472e+06 22181 3.93065e+07 0 0.129925 0.991913 0.829619 7.91093e+07 0.003494 1.73153e+07 1.72824e+07 1.73914e+07 220 1.73522e+07 1.28574e+07 0.00270812 1.76523e+07 50.4286 0.0130165 0.995591 0 50.1096 GTEX-WFG7-2226-SM-3GIKP 0 B1 2 pieces, ,2% interstitial fat ~11x7mm 8.2 Muscle Muscle - Skeletal 0011907 238 504 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.697657 155208 0.978936 0.702888 0.876581 19155 1 76 0.00192125 131 0 5.12907e+07 0.020857 470726 7.29714e+07 7.24637e+06 19158 2.53661e+07 0 0.102355 0.702888 0.616139 5.12907e+07 0.0130197 1.10178e+07 7.11265e+06 1.12163e+07 135 1.13128e+07 9.59218e+06 0.00742917 1.12447e+07 49.8491 0.00645083 0.70812 0 50.4464 GTEX-WFG7-2326-SM-3GIKV 0 B1 2 pieces ~4mm. Adherent rim of fibrous tissue circmferentially on both, ~0.5mm--1mm 7.8 Blood Vessel Artery - Tibial 0007610 245 497 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.782188 109822 0.97615 0.786556 0.851158 20528 1 76 0.00192749 124 0 6.09089e+07 0.0234915 287421 7.74374e+07 7.26386e+06 20541 3.01787e+07 0 0.124991 0.786556 0.669483 6.09089e+07 0.0127788 1.30687e+07 4.46656e+06 1.32715e+07 139 1.33451e+07 1.10044e+07 0.00732302 1.33019e+07 49.919 0.00371165 0.790923 0 50.3848 GTEX-WFG7-2426-SM-3GIL2 0 B1 2 pieces ~4mm d. Patchy nubbins of adherent fat, ~0.5mm noted on one 7.5 Nerve Nerve - Tibial 0001323 246 496 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.949102 233100 0.972103 0.954425 0.810275 23984 1 76 0.00194414 168 0 8.98312e+07 0.0276265 289524 9.41208e+07 7.72499e+06 24016 4.45182e+07 0 0.161828 0.954425 0.773346 8.98312e+07 0.0127298 1.95985e+07 8.88778e+06 1.98194e+07 189 1.99175e+07 1.50967e+07 0.00730688 1.99661e+07 50.0608 0.00307609 0.959747 0 50.2803 GTEX-WFG7-2526-SM-EWRM5 0 B1 2 pieces ~13x11mm 5.5 Adipose Tissue Adipose - Subcutaneous 0002190 247 495 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.984112 290750 0.975519 0.987614 0.829725 22079 1 76 0.00222045 168 0 7.59755e+07 0.024219 319322 7.69283e+07 4.9626e+06 22099 3.77689e+07 0 0.145794 0.987614 0.819449 7.59755e+07 0.00329329 1.66387e+07 7.81761e+06 1.68527e+07 190 1.68594e+07 1.31843e+07 0.00274243 1.68765e+07 50.0254 0.0041509 0.991117 0 50.3195 GTEX-WFG8-0001-SM-4LVN8 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -56 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989442 600082 0.96413 0.990369 0.796275 20258 1 76 0.0025729 131 0 6.18835e+07 0.035235 263079 6.24853e+07 4.56265e+06 20278 3.0772e+07 0 0.167856 0.990369 0.788606 6.18835e+07 0.00315757 1.37063e+07 1.0002e+07 1.38155e+07 127 1.38585e+07 1.37956e+07 0.00286496 1.37227e+07 49.7537 0.00421025 0.991298 0 50.1985 GTEX-WFG8-0004-SM-3G3SO B1 Blood Whole Blood 0013756 -56 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003060_R02C01 GTEX-WFG8-0004-SM-3G3TP B1 Blood Whole Blood 0013756 -56 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855034_R02C01 GTEX-WFG8-0004-SM-3USQZ B1 Blood Whole Blood 0013756 -56 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-WFG8-0004-SM-5URCY B1 Blood Whole Blood 0013756 -56 BP-26475 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/20/2012 LCSET-5270,LCSET-5431 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WFG8-0006-SM-3GIKS B1 9.2 Blood Whole Blood 0013756 -56 BP-26514 RNA isolation_PAXgene Blood RNA (Manual) 06/21/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.909738 463495 0.95763 0.914343 0.806363 19450 1 76 0.00218374 130 0 8.01506e+07 0.042 432535 8.76592e+07 6.67271e+06 19466 3.97251e+07 0 0.151267 0.914343 0.737293 8.01506e+07 0.0127535 1.73169e+07 2.07829e+07 1.7486e+07 158 1.75862e+07 1.46696e+07 0.007442 1.75889e+07 50.0038 0.00493428 0.918949 0 50.243 GTEX-WFG8-0008-SM-4LVN6 B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 333 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991069 366531 0.973424 0.991938 0.836441 20563 1 76 0.00197536 154 0 6.364e+07 0.0262032 134477 6.41573e+07 4.70095e+06 20577 3.16673e+07 0 0.136983 0.991938 0.829698 6.364e+07 0.00254677 1.41761e+07 7.51112e+06 1.42895e+07 145 1.43177e+07 1.41404e+07 0.00226081 1.42051e+07 49.8026 0.00209605 0.992808 0 50.1993 GTEX-WFG8-0126-SM-4LVMH 1 B1 2 pieces ~8x8mm, all cortex, well preserved. A few 1-2 mm foci of partially interstitial fat, encircled 8.1 Adrenal Gland Adrenal Gland 0002369 186 827 BP-27322 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990623 298766 0.977258 0.991547 0.846042 20895 1 76 0.00209673 129 0 5.46095e+07 0.0224156 678340 5.50751e+07 4.0332e+06 20909 2.71579e+07 0 0.131216 0.991547 0.838891 5.46095e+07 0.0028617 1.20949e+07 5.97268e+06 1.2252e+07 151 1.22007e+07 8.85796e+06 0.00247886 1.2198e+07 49.9943 0.0123166 0.99247 0 50.3227 GTEX-WFG8-0326-SM-4LVN4 1 B1 2 pieces ~9x9mm , minimal fat, Islets well-visualized, representative ones encircled 7.1 Pancreas Pancreas 0001150 190 823 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988995 355644 0.972458 0.990376 0.850951 21318 1 76 0.00214361 132 0 6.54678e+07 0.0273845 178409 6.6104e+07 4.83407e+06 21329 3.25558e+07 0 0.121507 0.990376 0.842761 6.54678e+07 0.00293412 1.48167e+07 1.27452e+07 1.49053e+07 131 1.49263e+07 1.66712e+07 0.00253832 1.49059e+07 49.9658 0.00269891 0.991756 0 50.1491 GTEX-WFG8-0426-SM-3GILD 1 B1 2 pieces ~12x8mm, early multinodular goiter 7.6 Thyroid Thyroid 0002046 197 816 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.964883 203349 0.967397 0.970393 0.773227 24461 1 76 0.00195798 152 0 8.90396e+07 0.0323598 502997 9.17562e+07 7.22087e+06 24502 4.41293e+07 0 0.194169 0.970393 0.750334 8.90396e+07 0.0127074 1.93226e+07 8.70189e+06 1.95986e+07 191 1.96594e+07 1.30327e+07 0.00730216 1.97155e+07 50.0712 0.00548189 0.975903 0 50.3545 GTEX-WFG8-0626-SM-3GILJ 1 B1 2 pieces ~10x7mm, minimal ischemic changes 8.3 Heart Heart - Left Ventricle 0006566 207 806 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.853235 133734 0.983463 0.858089 0.881112 20605 1 76 0.00170245 165 0 8.63627e+07 0.0163466 1.95295e+06 1.00645e+08 9.14134e+06 20612 4.28121e+07 0 0.102351 0.858089 0.756073 8.63627e+07 0.0126783 1.89168e+07 1.06444e+07 1.91383e+07 219 1.90149e+07 1.25795e+07 0.00715933 1.93817e+07 50.4777 0.0194043 0.862944 0 50.2911 GTEX-WFG8-0726-SM-3GILP 1 B1 2 pieces ~10x6mm 8.4 Heart Heart - Atrial Appendage 0006631 211 802 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.920737 163955 0.978393 0.926011 0.848842 22145 1 76 0.00172898 175 0 9.37881e+07 0.021364 1.554e+06 1.01282e+08 8.32165e+06 22159 4.6503e+07 0 0.129551 0.926011 0.786037 9.37881e+07 0.0124778 1.98104e+07 1.22602e+07 2.02661e+07 219 2.01153e+07 1.40165e+07 0.00707276 2.03416e+07 50.2797 0.0153433 0.931285 0 50.5686 GTEX-WFG8-0826-SM-4LVN5 1 B1 6 pieces ~10x2mm, some with up to ~ 0.5mm atherosis, encircled. 6.3 Blood Vessel Artery - Aorta 0001496 215 798 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632,LCSET-4104 10/13/2013 TruSeq.v1 RNASEQ 0.986678 443101 0.973626 0.989406 0.836734 22223 1 76 0.00205507 161 0 7.3559e+07 0.0260724 267987 7.43467e+07 6.96754e+06 22242 3.65289e+07 0 0.136892 0.989406 0.827869 7.3559e+07 0.00314577 1.59982e+07 7.42718e+06 1.61289e+07 180 1.61177e+07 1.3788e+07 0.00259892 1.62121e+07 50.146 0.00360456 0.992133 0 50.2035 GTEX-WFG8-0926-SM-3GIKJ 1 B1 2 pieces ~10x8mm, patchy acute pneumonia, representative fields encircled. 8.4 Lung Lung 0008952 221 792 BP-27324 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.694364 99688 0.976977 0.699429 0.826932 21072 1 76 0.00214458 127 0 3.88599e+07 0.0227173 235835 5.55595e+07 1.65407e+07 21081 1.92246e+07 0 0.150045 0.699429 0.57838 3.88599e+07 0.0133241 8.55792e+06 3.45299e+06 8.69437e+06 142 8.74911e+06 7.13411e+06 0.00769388 8.76503e+06 50.0455 0.00424473 0.704493 0 50.3955 GTEX-WFG8-1026-SM-4LVMZ 1 B1 6 pieces ~9x3mm, good specimens, all muscle 7.9 Esophagus Esophagus - Muscularis 0004648 233 780 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990198 236575 0.975694 0.99132 0.840235 22171 1 76 0.00205021 167 0 7.1235e+07 0.0240866 528433 7.18587e+07 5.13407e+06 22186 3.54372e+07 0 0.135459 0.99132 0.832942 7.1235e+07 0.00271604 1.55248e+07 6.68627e+06 1.56858e+07 191 1.5633e+07 1.19421e+07 0.00238275 1.56603e+07 50.0437 0.00735378 0.992441 0 50.2578 GTEX-WFG8-1126-SM-4LVN1 1 B1 6 pieces ~7x3mm, good specimens, all muscle 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 236 777 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990713 232320 0.975666 0.99164 0.840792 21402 1 76 0.00205351 144 0 6.27838e+07 0.0240798 440530 6.3313e+07 4.61451e+06 21418 3.12394e+07 0 0.134874 0.99164 0.833763 6.27838e+07 0.00270295 1.37194e+07 5.56412e+06 1.38655e+07 161 1.37898e+07 1.06679e+07 0.00237793 1.38542e+07 50.1165 0.00695797 0.992567 0 50.2649 GTEX-WFG8-1226-SM-4V6EI 1 B1 6 pieces ~10x1.5mm. Squamous mucosa, well preserved, ~30-40% of thickness 9.5 Esophagus Esophagus - Mucosa 0006920 239 774 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993161 394993 0.97516 0.99409 0.831913 23728 1 76 0.00217391 281 0 1.1138e+08 0.024417 511323 1.12042e+08 7.26131e+06 23752 5.54958e+07 0 0.143246 0.99409 0.826997 1.1138e+08 0.00257442 2.50914e+07 1.7635e+07 2.51345e+07 329 2.51235e+07 2.30847e+07 0.00237398 2.52091e+07 50.085 0.00456367 0.995018 0 50.0429 GTEX-WFG8-1326-SM-4LVN3 1 B1 6 pieces, ~9x1.5mm, remarkably well-preserved mucosa 50-70% of thickness 7.3 Stomach Stomach 0000945 243 770 BP-27326 RNA isolation_PAXgene Tissue miRNA 07/12/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.986903 258076 0.972155 0.987984 0.826595 22171 1 76 0.00321712 207 0 6.09758e+07 0.0243736 505441 6.17174e+07 4.53049e+06 22184 3.01976e+07 0 0.14556 0.987984 0.816662 6.09758e+07 0.00402048 1.37911e+07 2.40475e+07 1.38991e+07 165 1.39269e+07 1.17801e+07 0.00361836 1.38328e+07 49.8306 0.0081896 0.989065 0 50.1949 GTEX-WFG8-1626-SM-4LVMB 1 B1 6 pieces, ~7x2mm minimal muscle; only 2 have significant lymphoid cells, encircled. Abundant fat/mucosa in 5. 8.6 Small Intestine Small Intestine - Terminal Ileum 0001211 277 736 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990494 275572 0.975594 0.991366 0.828131 23092 1 76 0.00230466 145 0 6.53824e+07 0.0235062 337442 6.59518e+07 4.80271e+06 23111 3.25053e+07 0 0.147463 0.991366 0.820981 6.53824e+07 0.00298537 1.45735e+07 7.12624e+06 1.46861e+07 155 1.46746e+07 1.22261e+07 0.00264472 1.46432e+07 49.9466 0.0051165 0.992239 0 50.1923 GTEX-WFG8-1726-SM-4LVM6 1 B1 6 pieces ~8x2mm. All muscle in 3; contaminant mucosa is 3, encircled 8.3 Colon Colon - Sigmoid 0001159 271 742 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991215 195005 0.976748 0.992081 0.845179 21022 1 76 0.00202586 124 0 5.29466e+07 0.0230118 426152 5.33693e+07 3.88473e+06 21034 2.63506e+07 0 0.131569 0.992081 0.838486 5.29466e+07 0.00269103 1.15246e+07 4.77095e+06 1.16639e+07 138 1.1613e+07 9.13923e+06 0.00235815 1.16213e+07 50.018 0.00798497 0.992948 0 50.3004 GTEX-WFG8-1826-SM-4LVM4 1 B1 2 pieces ~11x7mm. Glandular hyperplasia 7.7 Prostate Prostate 0002367 291 722 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988769 488124 0.953156 0.989695 0.741651 23951 1 76 0.0022943 131 0 5.73419e+07 0.04664 173004 5.79389e+07 4.15901e+06 23980 2.85152e+07 0 0.211505 0.989695 0.734008 5.73419e+07 0.00308665 1.24426e+07 1.28029e+07 1.25826e+07 137 1.25613e+07 8.42604e+06 0.0026901 1.25322e+07 49.9419 0.00298597 0.990621 0 50.2796 GTEX-WFG8-1926-SM-4LVM1 1 B1 2 pieces ~11x7mm. Spermatogenesis is markedly reduced for age of the patient 7.6 Testis Testis 0000473 295 718 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988107 315235 0.941192 0.989601 0.761822 31237 1 76 0.00224201 140 0 6.61313e+07 0.0584952 550114 6.68262e+07 4.97109e+06 31281 3.28767e+07 0 0.17937 0.989601 0.7539 6.61313e+07 0.00291082 1.40409e+07 7.93435e+06 1.41322e+07 145 1.41781e+07 1.13214e+07 0.00257591 1.40878e+07 49.8402 0.00823201 0.991095 0 50.1621 GTEX-WFG8-2026-SM-EXOHO 0 B1 2 pieces ductal elements present, representative ones encircled 5.5 Breast Breast - Mammary Tissue 0008367 305 708 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.985877 260001 0.968703 0.98757 0.766148 24602 1 76 0.00196837 208 0 8.86089e+07 0.0310693 390485 8.97242e+07 4.79788e+06 24639 4.41183e+07 0 0.202555 0.98757 0.756625 8.86089e+07 0.00313511 1.94634e+07 7.57492e+06 1.95865e+07 243 1.95282e+07 1.35521e+07 0.00255074 1.96609e+07 50.1694 0.00435206 0.989262 0 50.1576 GTEX-WFG8-2126-SM-3GIKQ 0 B1 6 pieces ~7x3mm. Squamous epithelium is ~2-3% of thickness 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 309 704 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.350324 55559 0.962334 0.356488 0.783702 19390 1 76 0.00212472 113 0 1.65559e+07 0.0374969 174252 4.64415e+07 5.70820e+06 19396 8.09767e+06 0 0.178633 0.356488 0.27938 1.65559e+07 0.0136294 3.53545e+06 3.132e+06 3.62671e+06 117 3.74032e+06 2.45002e+06 0.00777762 3.68836e+06 49.6503 0.00375207 0.362652 0 50.6371 GTEX-WFG8-2226-SM-3GIL9 0 B1 6 pieces ~7x3mm. Squamous epithelium is ~2-3% of thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 333 680 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.803119 224083 0.969322 0.807613 0.768132 23885 1 76 0.00198476 163 0 8.74618e+07 0.0304294 1.10194e+06 1.08297e+08 8.9731e+06 23918 4.33205e+07 0 0.20119 0.807613 0.620354 8.74618e+07 0.0127593 1.90597e+07 1.05024e+07 1.93139e+07 188 1.93196e+07 1.28746e+07 0.00734204 1.94971e+07 50.2286 0.0101752 0.812106 0 50.3312 GTEX-WFG8-2326-SM-3GILF 0 B1 2 pieces ~13x8mm 8.4 Adipose Tissue Adipose - Subcutaneous 0002190 329 684 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 EXCLUDE 0.307638 43148 0.97101 0.316019 0.803162 18591 1 76 0.00226457 119 0 1.79543e+07 0.0287281 72772 5.68139e+07 8.9859e+06 18593 8.65564e+06 0 0.167849 0.316019 0.253814 1.79543e+07 0.0150399 3.81075e+06 2.34747e+06 3.89927e+06 124 4.10359e+06 3.13162e+06 0.00848286 4.04471e+06 49.6387 0.00128088 0.3244 0 50.574 GTEX-WFG8-2326-SM-5S2UE 0 B1 2 pieces ~13x8mm 8.4 Adipose Tissue Adipose - Subcutaneous 0002190 329 684 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-4996 04/03/2014 TruSeq.v1 EXCLUDE 0.993035 255017 0.975902 0.994604 0.818899 23105 1 76 0.00191583 276 0 9.56887e+07 0.0237945 374278 9.62078e+07 9.31696e+06 23134 4.76762e+07 0 0.157003 0.994604 0.81448 9.56887e+07 0.00276493 2.11608e+07 9.90615e+06 2.12663e+07 296 2.12457e+07 1.70628e+07 0.00233971 2.13307e+07 50.0999 0.00389031 0.996173 0 50.1243 GTEX-WFG8-2326-SM-DIPDX 0 B1 2 pieces ~13x8mm 8.4 Adipose Tissue Adipose - Subcutaneous 0002190 329 684 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-10311,LCSET-10535 01/26/2017 TruSeq.v1 RNASEQ 0.993578 650030 0.977647 0.994883 0.820425 23918 1 76 0.00197361 381 0 1.28385e+08 0.0220331 428835 1.29046e+08 7.8594e+06 23953 6.39636e+07 0 0.157222 0.994883 0.816227 1.28385e+08 0.00265261 2.84144e+07 1.17553e+07 2.85697e+07 377 2.86505e+07 2.44672e+07 0.00231266 2.84942e+07 49.8632 0.00332313 0.996187 0 50.1363 GTEX-WFG8-2426-SM-3GILL 0 B1 2 pieces ~14x8mm. minimal interstitial fat 8 Muscle Muscle - Skeletal 0011907 320 693 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.873315 174243 0.983619 0.879043 0.889787 19658 1 76 0.00169743 169 0 7.91502e+07 0.0161568 895664 9.00413e+07 8.12515e+06 19666 3.91759e+07 0 0.0938324 0.879043 0.782161 7.91502e+07 0.0130329 1.70225e+07 8.10814e+06 1.70851e+07 201 1.70871e+07 1.47317e+07 0.00732821 1.74472e+07 50.5214 0.00994726 0.884772 0 50.0918 GTEX-WFG8-2526-SM-3GILR 0 B1 2 pieces ~5mm d. ~30% fat, (interstitial), focal ~1mm adherent rim rim of, encircled 6.3 Nerve Nerve - Tibial 0001323 328 685 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.352964 62670 0.968474 0.356086 0.776024 20059 1 76 0.00210272 125 0 2.50904e+07 0.0312971 141491 7.04617e+07 7.93938e+06 20074 1.23282e+07 0 0.19245 0.356086 0.276331 2.50904e+07 0.0135297 5.44772e+06 2.51662e+06 5.5309e+06 143 5.59046e+06 3.59499e+06 0.00776608 5.58973e+06 49.9967 0.00200805 0.359209 0 50.3789 GTEX-WFJO-0002-SM-3P61X B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -104 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952297 1.01287e+06 0.965194 0.973601 0.803879 23634 1 76 0.0032353 287 0 1.2697e+08 0.034335 897046 1.30412e+08 1.69148e+07 23684 6.19619e+07 0 0.161314 0.973601 0.782658 1.2697e+08 0.00444749 2.75686e+07 2.34517e+07 2.76698e+07 298 2.89017e+07 2.86525e+07 0.00382813 2.88199e+07 49.9291 0.00687853 0.994905 0 50.0916 GTEX-WFJO-0003-SM-3G3S3 B1 Blood Whole Blood 0013756 -104 BP-26502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/21/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003082_R01C01 GTEX-WFJO-0003-SM-3G3T4 B1 Blood Whole Blood 0013756 -104 BP-26502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/21/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R03C02 GTEX-WFJO-0003-SM-3UZER B1 Blood Whole Blood 0013756 -104 BP-26502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/21/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WFJO-0003-SM-5URBP B1 Blood Whole Blood 0013756 -104 BP-26502 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/21/2012 LCSET-5270,LCSET-5434 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WFJO-0005-SM-3GIKY B1 7.9 Blood Whole Blood 0013756 -104 BP-26514 RNA isolation_PAXgene Blood RNA (Manual) 06/21/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.424065 395777 0.945877 0.427511 0.776468 18189 1 76 0.00237199 108 0 4.18813e+07 0.0536007 372187 9.79655e+07 1.05493e+07 18197 2.06724e+07 0 0.169409 0.427511 0.331949 4.18813e+07 0.0138083 9.06936e+06 2.91562e+07 9.12509e+06 121 9.26081e+06 7.79202e+06 0.00804406 9.25212e+06 49.9766 0.00379916 0.430956 0 50.1532 GTEX-WFJO-0008-SM-4LVN7 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 286 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.9907 356179 0.974202 0.991659 0.843063 19937 1 76 0.00202809 148 0 5.98939e+07 0.02537 123873 6.03976e+07 4.5751e+06 19950 2.97971e+07 0 0.131139 0.991659 0.836032 5.98939e+07 0.00259149 1.336e+07 6.86878e+06 1.34468e+07 139 1.34743e+07 1.29007e+07 0.00230952 1.33877e+07 49.8389 0.00205096 0.992619 0 50.1618 GTEX-WFJO-0226-SM-3GIKW 1 B1 2 pieces, 7x5.5 & 12X6mm;well sampled 7.1 Thyroid Thyroid 0002046 191 886 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.74588 145650 0.963167 0.752212 0.747113 23305 1 76 0.00215415 118 0 5.35927e+07 0.0364641 293408 7.12468e+07 7.04098e+06 23331 2.64654e+07 0 0.216054 0.752212 0.561987 5.35927e+07 0.0134077 1.15782e+07 5.58823e+06 1.17003e+07 131 1.18432e+07 7.5222e+06 0.00773357 1.18388e+07 49.9906 0.00411819 0.758544 0 50.2622 GTEX-WFJO-0326-SM-3GIL3 1 B1 2 pieces, 6x6 & 7x6mm; heart failure cells, mild patchy pneumonia 8.2 Lung Lung 0008952 197 880 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.776873 131176 0.973967 0.782412 0.819675 23288 1 76 0.00211611 122 0 6.80898e+07 0.0256836 299211 8.70254e+07 9.50333e+06 23308 3.37032e+07 0 0.154291 0.782412 0.641324 6.80898e+07 0.0127867 1.49685e+07 5.7595e+06 1.52092e+07 141 1.53413e+07 1.16341e+07 0.00741364 1.52766e+07 49.8943 0.0034382 0.787952 0 50.3988 GTEX-WFJO-0426-SM-4LVM7 1 B1 6 pieces, up to 8x5mm; well sampled muscle without extraneous tissue 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 202 876 BP-27442 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989138 234293 0.974978 0.990067 0.829332 20941 1 76 0.00216731 137 0 5.78458e+07 0.0247969 429128 5.84261e+07 4.2632e+06 20959 2.87822e+07 0 0.145646 0.990067 0.821094 5.78458e+07 0.00282857 1.25676e+07 5.90961e+06 1.27002e+07 149 1.2657e+07 9.05309e+06 0.00249763 1.26652e+07 50.016 0.0073448 0.990997 0 50.2623 GTEX-WFJO-0626-SM-4LVMC 1 B1 2 pieces, 11x6.5 & 8.5x7mm; 1 piece with ~40% internal adipose, other without adipose 6.9 Pancreas Pancreas 0001150 210 869 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990026 303260 0.971071 0.991063 0.805305 21629 1 76 0.00234885 117 0 6.02791e+07 0.0287479 152991 6.08226e+07 4.58939e+06 21647 2.9978e+07 0 0.165766 0.991063 0.798108 6.02791e+07 0.0031376 1.36561e+07 1.18071e+07 1.38415e+07 121 1.38109e+07 1.4414e+07 0.00274281 1.37571e+07 49.9024 0.00251536 0.9921 0 50.3371 GTEX-WFJO-0726-SM-4LVM8 1 B1 6 pieces, up to 7x6mm; well sampled muscularis 8.3 Esophagus Esophagus - Muscularis 0004648 216 864 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990756 557251 0.977344 0.991507 0.854664 22465 1 76 0.00203176 379 0 1.13892e+08 0.0223794 769564 1.14868e+08 8.20673e+06 22489 5.66701e+07 0 0.12268 0.991507 0.847406 1.13892e+08 0.00270575 2.45676e+07 1.08521e+07 2.48478e+07 373 2.47069e+07 1.97369e+07 0.0023685 2.47954e+07 50.0894 0.00669957 0.992258 0 50.2835 GTEX-WFJO-0826-SM-4LVM5 1 B1 6 pieces, up to 6x4mm; well sampled and well preserved mucosa with focal chronic esophagitis 9.6 Esophagus Esophagus - Mucosa 0006920 217 864 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989926 273083 0.978227 0.990689 0.834804 21289 1 76 0.00227123 132 0 5.61216e+07 0.0214754 184464 5.6649e+07 4.21832e+06 21301 2.79246e+07 0 0.143423 0.990689 0.827031 5.61216e+07 0.00294971 1.27199e+07 7.83965e+06 1.27873e+07 131 1.2792e+07 1.14643e+07 0.00261021 1.27568e+07 49.9312 0.00325626 0.991453 0 50.1321 GTEX-WFJO-0926-SM-4LVM2 1 B1 6 pieces, up to 8x3mm; lymphoid tissue with slight autolysis, mucosa has moderate autolysis; abundant lymphoid tissue, up to 5 x 0.8 mm in 2 pieces, small focal lymphoid nodules in 3 and none in 1 piece; ~20% untrimmed muscularis in 3 pieces 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 223 858 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.98791 293675 0.961397 0.989578 0.766553 23872 1 76 0.00249932 134 0 6.20313e+07 0.0378932 292046 6.26846e+07 4.8301e+06 23898 3.0803e+07 0 0.194844 0.989578 0.758564 6.20313e+07 0.00332862 1.36237e+07 7.54074e+06 1.37121e+07 148 1.37204e+07 9.85232e+06 0.00291327 1.37196e+07 49.9986 0.00465898 0.991246 0 50.1617 GTEX-WFJO-1026-SM-3GIKL 1 B1 2 pieces, 7x6 & 8x7.5mm; central unfixed holes up to 3mm across 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 229 853 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.917027 245652 0.968022 0.923318 0.805257 22096 1 76 0.00196594 142 0 6.68267e+07 0.0317029 522204 7.23766e+07 6.12512e+06 22117 3.3076e+07 0 0.162766 0.923318 0.743508 6.68267e+07 0.0132811 1.44904e+07 1.01762e+07 1.47663e+07 165 1.48116e+07 1.00361e+07 0.00758498 1.48631e+07 50.0868 0.00721509 0.929609 0 50.4715 GTEX-WFJO-1126-SM-4LVLZ 1 B1 6 pieces, up to 10x5mm; all muscularis, no mucosa 8.4 Stomach Stomach 0000945 230 852 BP-27446 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991652 284729 0.979598 0.992254 0.859454 21455 1 76 0.00202394 175 0 7.14805e+07 0.0200623 297410 7.20385e+07 5.27327e+06 21467 3.5579e+07 0 0.120143 0.992254 0.852797 7.14805e+07 0.00265533 1.56815e+07 6.56906e+06 1.58208e+07 189 1.57941e+07 1.33212e+07 0.00233945 1.57548e+07 49.9378 0.00412848 0.992855 0 50.2211 GTEX-WFJO-1926-SM-3GILA 1 B1 2 pieces, 13x9 & 15x10mm; central hollow unfixed areas up to 6x4mm 7 Adipose Tissue Adipose - Subcutaneous 0002190 273 816 BP-27451 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.895036 215354 0.971455 0.900533 0.801767 23401 1 76 0.0019928 141 0 7.8691e+07 0.0283133 493066 8.73827e+07 7.53818e+06 23423 3.89756e+07 0 0.169688 0.900533 0.722017 7.8691e+07 0.012744 1.7155e+07 9.81503e+06 1.74218e+07 173 1.75074e+07 1.16982e+07 0.00733557 1.75077e+07 50.0004 0.00564261 0.90603 0 50.3859 GTEX-WFJO-2026-SM-4LVM3 1 B1 6 pieces, up to 2x2mm; very good well trimmed samples especially largest 8.9 Salivary Gland Minor Salivary Gland 0006330 297 793 BP-27451 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988033 328237 0.970853 0.989306 0.799087 23617 1 76 0.00240836 147 0 6.89093e+07 0.0282212 165297 6.96542e+07 5.11858e+06 23641 3.4245e+07 0 0.171766 0.989306 0.790541 6.89093e+07 0.00308974 1.5406e+07 9.16982e+06 1.55141e+07 157 1.55367e+07 1.26006e+07 0.00274861 1.54714e+07 49.8947 0.00237311 0.990578 0 50.1749 GTEX-WFON-0001-SM-3P61W B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -164 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951138 833508 0.966808 0.972909 0.801716 23181 1 76 0.00327583 285 0 1.10814e+08 0.0327232 878385 1.139e+08 1.55145e+07 23227 5.40399e+07 0 0.165092 0.972909 0.779997 1.10814e+08 0.0045104 2.40516e+07 2.1298e+07 2.42265e+07 274 2.53478e+07 2.5288e+07 0.0038793 2.51578e+07 49.8119 0.00771192 0.994679 0 50.1812 GTEX-WFON-0001-SM-5S2SE B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -164 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-0003-SM-3G3S8 B1 Blood Whole Blood 0013756 -163 BP-26542 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003082_R02C01 GTEX-WFON-0003-SM-3G3T9 B1 Blood Whole Blood 0013756 -163 BP-26542 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R04C02 GTEX-WFON-0003-SM-3UZES B1 Blood Whole Blood 0013756 -163 BP-26542 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WFON-0003-SM-5URD4 B1 Blood Whole Blood 0013756 -163 BP-26542 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 06/22/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WFON-0005-SM-3NMC9 B1 7.4 Blood Whole Blood 0013756 -165 BP-26649 RNA isolation_PAXgene Blood RNA (Manual) 06/26/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.981775 1.42098e+06 0.947217 0.984313 0.780105 18833 1 76 0.0032307 151 0 1.07319e+08 0.0517816 357871 1.09029e+08 1.39764e+07 18843 5.33721e+07 0 0.167112 0.984313 0.767868 1.07319e+08 0.00505473 2.38249e+07 1.51869e+08 2.42831e+07 178 2.43175e+07 2.55878e+07 0.00414036 2.40762e+07 49.7507 0.00328234 0.986852 0 50.4762 GTEX-WFON-0005-SM-5S2RV B1 7.4 Blood Whole Blood 0013756 -165 BP-26649 RNA isolation_PAXgene Blood RNA (Manual) 06/26/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-0126-SM-4LVM9 1 B1 2 pieces ~8x8mm 5.8 Spleen Spleen 0002106 137 516 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.986697 465861 0.957794 0.987684 0.795271 23283 1 76 0.00277523 148 0 6.93789e+07 0.0405746 573415 7.0244e+07 5.17672e+06 23301 3.44303e+07 0 0.162523 0.987684 0.785477 6.93789e+07 0.0036194 1.51541e+07 1.54848e+07 1.53048e+07 173 1.52657e+07 9.99684e+06 0.00319689 1.52766e+07 50.0177 0.00816319 0.988671 0 50.2474 GTEX-WFON-0226-SM-3GIKR 1 B1 2 pieces ~8x6 8.4 Heart Heart - Atrial Appendage 0006631 135 519 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.946123 175263 0.978093 0.952296 0.852132 20774 1 76 0.00177333 149 0 7.74922e+07 0.0216889 1.80373e+06 8.13741e+07 6.82334e+06 20785 3.83875e+07 0 0.125961 0.952296 0.811482 7.74922e+07 0.0129534 1.66212e+07 1.13218e+07 1.69709e+07 205 1.67975e+07 1.02046e+07 0.00732715 1.71351e+07 50.4976 0.0221659 0.958469 0 50.5206 GTEX-WFON-0326-SM-3GIKX 1 B1 2 pieces ~10x9mm. Minimal ischemic changes 8.2 Heart Heart - Left Ventricle 0006566 148 506 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.977535 226964 0.983386 0.982894 0.861567 20562 1 76 0.00178538 191 0 9.41349e+07 0.016421 2.03595e+06 9.57732e+07 7.09668e+06 20578 4.6681e+07 0 0.121819 0.982894 0.84683 9.41349e+07 0.0128248 2.04462e+07 1.92362e+07 2.09406e+07 248 2.06223e+07 1.26491e+07 0.00727499 2.10727e+07 50.54 0.0212581 0.988253 0 50.5973 GTEX-WFON-0326-SM-5S2TP 1 B1 2 pieces ~10x9mm. Minimal ischemic changes 8.2 Heart Heart - Left Ventricle 0006566 148 506 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-0426-SM-3GIL4 1 B1 2 pieces ~1x7mm. Abundant vessels, bronchial/bronchiolar epithelial elements present, encircled. Minute focus of bronchial cartilage in one, delineated 8.4 Lung Lung 0008952 200 455 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.923293 244663 0.972654 0.928926 0.801276 24716 1 76 0.00205057 162 0 9.32095e+07 0.0270573 579933 1.00341e+08 9.35067e+06 24754 4.61717e+07 0 0.171378 0.928926 0.744327 9.32095e+07 0.0132743 2.05215e+07 8.85945e+06 2.07324e+07 198 2.08138e+07 1.59509e+07 0.00762839 2.09594e+07 50.1743 0.00577961 0.93456 0 50.2556 GTEX-WFON-0426-SM-5S2T1 1 B1 2 pieces ~1x7mm. Abundant vessels, bronchial/bronchiolar epithelial elements present, encircled. Minute focus of bronchial cartilage in one, delineated 8.4 Lung Lung 0008952 200 455 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-0526-SM-4LVLY 1 B1 6 pieces ~8x1.5mm 7.4 Blood Vessel Artery - Aorta 0001496 162 494 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991459 320504 0.976095 0.992232 0.843097 21229 1 76 0.0020902 148 0 6.61513e+07 0.0235471 200500 6.66692e+07 4.74207e+06 21242 3.29e+07 0 0.132998 0.992232 0.836547 6.61513e+07 0.00292945 1.43056e+07 4.85224e+06 1.44525e+07 161 1.4406e+07 1.26977e+07 0.00250949 1.44095e+07 50.006 0.00300738 0.993005 0 50.2554 GTEX-WFON-0626-SM-4LVLX 1 B1 2 pieces, one ~9x9mm with attached 7x3mm adherent/interstital fat; the other ~6x2mm with adherent 11x6mm fat, delineated. Parenchyma well preserved, few Islets seen. Patchy fibrosis. 7.6 Pancreas Pancreas 0001150 203 453 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989524 343857 0.976715 0.990926 0.839213 22066 1 76 0.0021648 135 0 6.92099e+07 0.0231061 172950 6.98437e+07 5.15077e+06 22080 3.44077e+07 0 0.137502 0.990926 0.831598 6.92099e+07 0.00293829 1.57065e+07 1.13418e+07 1.57662e+07 137 1.58256e+07 1.67175e+07 0.002551 1.57569e+07 49.8913 0.00247624 0.992328 0 50.0948 GTEX-WFON-0626-SM-5S2SX 1 B1 2 pieces, one ~9x9mm with attached 7x3mm adherent/interstital fat; the other ~6x2mm with adherent 11x6mm fat, delineated. Parenchyma well preserved, few Islets seen. Patchy fibrosis. 7.6 Pancreas Pancreas 0001150 203 453 BP-27449 RNA isolation_PAXgene Tissue miRNA 07/16/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-0826-SM-4LVMI 1 B1 6 pieces 9x1.5mm. Squamous mucosa, well preserved, is ~20% of thickness. Presumed switch with 0925 below. 8.7 Esophagus Esophagus - Mucosa 0006920 175 482 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.98961 314796 0.975658 0.990617 0.837734 21354 1 76 0.00216825 133 0 5.47117e+07 0.0240183 231757 5.52298e+07 4.0471e+06 21370 2.72127e+07 0 0.137924 0.990617 0.829874 5.47117e+07 0.00283342 1.22959e+07 7.2145e+06 1.23765e+07 130 1.23799e+07 1.10763e+07 0.0025005 1.23484e+07 49.9362 0.00419623 0.991625 0 50.1634 GTEX-WFON-0926-SM-4LVMK 1 B1 6 pieces ~9x3mm, all muscularis, presumed switch with 0825 7.8 Esophagus Esophagus - Muscularis 0004648 181 477 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.99033 294837 0.976091 0.991219 0.83585 21431 1 76 0.0020876 150 0 6.47874e+07 0.0236556 391445 6.53614e+07 4.67475e+06 21448 3.22326e+07 0 0.140241 0.991219 0.82851 6.47874e+07 0.00277794 1.39857e+07 6.04553e+06 1.41691e+07 164 1.40904e+07 1.08787e+07 0.00243246 1.41247e+07 50.0607 0.00598893 0.992108 0 50.3258 GTEX-WFON-1026-SM-4LVMD 1 B1 6 pieces, ~8x4mm, all muscularis, excellent specimens 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 174 484 BP-27451 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991521 646411 0.977371 0.992292 0.849984 24367 1 76 0.00210133 525 0 1.48174e+08 0.0223409 943446 1.49325e+08 1.09492e+07 24402 7.3712e+07 0 0.127387 0.992292 0.843432 1.48174e+08 0.00286448 3.22416e+07 1.42903e+07 3.26633e+07 458 3.24301e+07 2.57899e+07 0.00248261 3.25933e+07 50.1255 0.00631807 0.993063 0 50.3248 GTEX-WFON-1126-SM-4LVMA 1 B1 6 pieces, muscoa is ~20-25% of thickness; remarkably well-preserved 6.4 Stomach Stomach 0000945 159 500 BP-27451 RNA isolation_PAXgene Tissue miRNA 07/16/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988512 213836 0.98177 0.989547 0.845068 21249 1 76 0.00213657 261 0 7.00698e+07 0.018052 1.14125e+06 7.08099e+07 5.06948e+06 21266 3.48513e+07 0 0.136702 0.989547 0.836235 7.00698e+07 0.0029423 1.58624e+07 3.96824e+07 1.60721e+07 220 1.59956e+07 1.21719e+07 0.00253901 1.60086e+07 50.0202 0.0161171 0.990582 0 50.3282 GTEX-WFON-1226-SM-3TW8F 1 B1 2 pieces ~8x7mm 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 245 415 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.97601 269200 0.971559 0.977695 0.836475 23371 1 76 0.00253809 275 0 8.97216e+07 0.0281311 662795 9.17686e+07 1.20817e+07 23397 4.46885e+07 0 0.135084 0.977695 0.817818 8.97216e+07 0.00404539 1.9699e+07 1.28305e+07 1.98863e+07 270 1.98883e+07 1.54467e+07 0.00329044 1.98379e+07 49.9364 0.00722246 0.97938 0 50.2366 GTEX-WFON-1326-SM-4LVMN 2 B1 6 pieces, ~9x2mm. Muscularis and fat, presumed sigmoid aliquots 1525 below 5.9 Colon Colon - Sigmoid 0001159 271 390 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.987291 215367 0.9736 0.988638 0.820048 22552 1 76 0.00212856 155 0 6.26925e+07 0.0261509 423058 6.3413e+07 4.81008e+06 22574 3.1155e+07 0 0.153552 0.988638 0.810731 6.26925e+07 0.00294528 1.37286e+07 5.69258e+06 1.39148e+07 164 1.38618e+07 9.95457e+06 0.00253636 1.38706e+07 50.0158 0.00667147 0.989985 0 50.3368 GTEX-WFON-1426-SM-4LVMT 2 B1 6 pieces ~10x3mm. Mucosa variably but moderately preserved, ~10-15% of thickness 7.1 Colon Colon - Transverse 0001157 268 393 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.987577 239461 0.974392 0.988846 0.839212 22130 1 76 0.00260262 163 0 6.2785e+07 0.0234813 732326 6.34932e+07 4.70592e+06 22145 3.1165e+07 0 0.135181 0.988846 0.829851 6.2785e+07 0.00323315 1.39602e+07 8.67225e+06 1.4142e+07 167 1.40687e+07 9.4537e+06 0.00291748 1.41019e+07 50.0589 0.0115339 0.990115 0 50.3234 GTEX-WFON-1526-SM-4LVMP 2 B1 6 pieces ~9x2.5mm. Small bowel mucosa (delineated) with scattered lymphoid aggregates, encircled. Should be relabled as ileum, presumed switch with 1325 above 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 270 392 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991478 267282 0.97445 0.99221 0.834794 21830 1 76 0.00208687 140 0 5.86828e+07 0.0252915 359936 5.91435e+07 4.38188e+06 21842 2.92017e+07 0 0.139656 0.99221 0.828291 5.86828e+07 0.00281084 1.27705e+07 6.00381e+06 1.29127e+07 149 1.28655e+07 9.8504e+06 0.00244859 1.28618e+07 49.9929 0.00608581 0.992942 0 50.2769 GTEX-WFON-1626-SM-4LVMV 1 B1 2 pieces, diffuse glandular hyperplasia. Large adherent 6mm fatty nubbin attached to one aliquot, encircled/delineated 7.1 Prostate Prostate 0002367 207 455 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988311 355776 0.959723 0.989682 0.761398 23815 1 76 0.00226439 124 0 5.4627e+07 0.0400587 232216 5.51966e+07 4.14363e+06 23836 2.71524e+07 0 0.198325 0.989682 0.753542 5.4627e+07 0.00305971 1.18768e+07 8.99079e+06 1.20179e+07 134 1.20013e+07 7.98562e+06 0.0026615 1.19738e+07 49.9425 0.00420707 0.991052 0 50.2953 GTEX-WFON-1726-SM-4LVMQ 1 B1 2 pieces, ~9x9mm. Diffuse macrovesicular steatosis involves 90+ % of specimens, which are well - preserved 8 Liver Liver 0001114 238 425 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991823 341416 0.980829 0.992412 0.857045 19742 1 76 0.00210862 126 0 6.51555e+07 0.0186653 482010 6.56537e+07 4.788e+06 19750 3.24158e+07 0 0.123784 0.992412 0.850542 6.51555e+07 0.0027246 1.42031e+07 9.79944e+06 1.42795e+07 150 1.4268e+07 1.38172e+07 0.00241643 1.42559e+07 49.9789 0.00734171 0.993002 0 50.1342 GTEX-WFON-1826-SM-3GILG 0 B1 2 pieces ~10x10mm. Essentially all fat; a few trace ductal units noted, encircled 6.2 Breast Breast - Mammary Tissue 0008367 208 455 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2025 09/11/2012 TruSeq.v1 RNASEQ 0.88134 245407 0.971339 0.886628 0.829311 22815 1 76 0.00195286 146 0 8.12916e+07 0.0283662 601468 9.16862e+07 1.49125e+07 22834 4.02827e+07 0 0.142029 0.886628 0.73529 8.12916e+07 0.0126534 1.76612e+07 1.10964e+07 1.79428e+07 179 1.80044e+07 1.34669e+07 0.00727124 1.80321e+07 50.0384 0.00656007 0.891915 0 50.3954 GTEX-WFON-1926-SM-3LK7L 0 B1 6 pieces ~8x2.5mm. Squamous epithelium is ~2-3% of thickness; abundant adnexal structures (hair, sebaceous glands, a few epidermal inclusion cysts) are present, representative ones encircled 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 234 430 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.979402 339780 0.970963 0.980215 0.799385 24934 1 76 0.00225177 284 0 1.01912e+08 0.0287958 407081 1.03969e+08 9.29612e+06 24969 5.0687e+07 0 0.171578 0.980215 0.78357 1.01912e+08 0.00339946 2.24952e+07 1.46612e+07 2.26785e+07 304 2.2696e+07 1.84451e+07 0.00282514 2.25625e+07 49.8524 0.00391539 0.981028 0 50.2029 GTEX-WFON-2026-SM-4LVMW 0 B1 2 pieces, ~9x7mm. Spermatogenesis present 6.7 Testis Testis 0000473 243 421 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988053 321322 0.942177 0.989206 0.747934 31130 1 76 0.00231367 130 0 6.24219e+07 0.0575456 799121 6.3103e+07 4.72613e+06 31170 3.10416e+07 0 0.194243 0.989206 0.739861 6.24219e+07 0.00301132 1.3377e+07 7.65326e+06 1.3453e+07 139 1.34697e+07 9.70885e+06 0.00266209 1.34259e+07 49.9186 0.0126638 0.99036 0 50.1416 GTEX-WFON-2026-SM-5S2TE 0 B1 2 pieces, ~9x7mm. Spermatogenesis present 6.7 Testis Testis 0000473 243 421 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-2126-SM-3LK7O 0 B1 6 pieces ~7x2mm. Up to ~1mm layer of fat on dermal surface of several, delineated. Squamous mucosa is ~2-3% of thickness 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 219 446 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.984973 303921 0.969353 0.985582 0.800208 22996 1 76 0.00229296 204 0 8.42067e+07 0.0303666 327324 8.54386e+07 7.88337e+06 23027 4.18705e+07 0 0.169145 0.985582 0.788671 8.42067e+07 0.00333508 1.83443e+07 1.12004e+07 1.84067e+07 199 1.84438e+07 1.54127e+07 0.0028137 1.83615e+07 49.8881 0.0038311 0.986191 0 50.0848 GTEX-WFON-2126-SM-5S2T9 0 B1 6 pieces ~7x2mm. Up to ~1mm layer of fat on dermal surface of several, delineated. Squamous mucosa is ~2-3% of thickness 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 219 446 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-2226-SM-3TW8W 0 B1 2 pieces ~11x8 mm. 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 215 450 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.98958 435401 0.96773 0.991235 0.808987 24546 1 76 0.00253828 281 0 1.08156e+08 0.0319277 484278 1.09113e+08 1.43767e+07 24580 5.38817e+07 0 0.158744 0.991235 0.801895 1.08156e+08 0.00396009 2.35983e+07 1.90121e+07 2.37586e+07 283 2.37898e+07 2.00127e+07 0.003248 2.37348e+07 49.9421 0.00443832 0.992889 0 50.1693 GTEX-WFON-2326-SM-3LK7M 0 B1 2 pieces, ~12x7mm. Minimal interstitial fat, excellent specimens. 6.3 Muscle Muscle - Skeletal 0011907 220 445 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.936402 316097 0.979941 0.936702 0.878435 20733 1 76 0.00193539 277 0 1.04754e+08 0.019804 920618 1.11832e+08 9.95798e+06 20747 5.21042e+07 0 0.101506 0.936702 0.822832 1.04754e+08 0.00316203 2.27711e+07 1.45277e+07 2.30874e+07 325 2.30388e+07 2.15836e+07 0.00254851 2.28513e+07 49.7957 0.00823213 0.937003 0 50.3449 GTEX-WFON-2326-SM-5S2SF 0 B1 2 pieces, ~12x7mm. Minimal interstitial fat, excellent specimens. 6.3 Muscle Muscle - Skeletal 0011907 220 445 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-WFON-2526-SM-3LK7P 0 B1 2 pieces ~1mm d. encircled; 75% of both aliquots (overall ~4x2mm) are attached vein and adipose tissue 7 Blood Vessel Artery - Tibial 0007610 223 443 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.962676 436628 0.969212 0.96315 0.807195 22726 1 76 0.00224181 276 0 9.78514e+07 0.0304689 406615 1.01595e+08 1.02414e+07 22753 4.86129e+07 0 0.162016 0.96315 0.77745 9.78514e+07 0.00338458 2.09788e+07 1.19806e+07 2.11595e+07 287 2.11348e+07 1.66769e+07 0.00281291 2.10584e+07 49.9095 0.0040023 0.963623 0 50.2145 GTEX-WH7G-0002-SM-4LVN9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -166 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990151 911125 0.96366 0.99142 0.820345 19914 1 76 0.00257486 130 0 5.9695e+07 0.0357109 271847 6.02117e+07 4.48395e+06 19932 2.96669e+07 0 0.143315 0.99142 0.813306 5.9695e+07 0.00328833 1.31956e+07 8.85946e+06 1.328e+07 129 1.33303e+07 1.30145e+07 0.00293114 1.32255e+07 49.8025 0.00451486 0.992689 0 50.1594 GTEX-WH7G-0004-SM-3PYKL B1 Blood Whole Blood 0013756 -166 BP-26737 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/28/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R04C01 GTEX-WH7G-0004-SM-3PZ86 B1 Blood Whole Blood 0013756 -166 BP-26737 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/28/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340002_R04C01 GTEX-WH7G-0004-SM-3UZEX B1 Blood Whole Blood 0013756 -166 BP-26737 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/28/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WH7G-0004-SM-5URCL B1 Blood Whole Blood 0013756 -166 BP-26737 DNA isolation_Whole Blood_QIAGEN Puregene (Autopure) 06/28/2012 LCSET-5270,LCSET-5380 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WH7G-0005-SM-3NMBX B1 8.1 Blood Whole Blood 0013756 -166 BP-26980 RNA isolation_PAXgene Blood RNA (Manual) 07/05/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.96594 1.45484e+06 0.957536 0.96793 0.79586 18321 1 76 0.00308893 196 0 1.2101e+08 0.0411879 229626 1.25019e+08 1.52279e+07 18328 6.02084e+07 0 0.161676 0.96793 0.770337 1.2101e+08 0.00478506 2.75202e+07 2.0943e+08 2.79164e+07 232 2.79834e+07 3.2075e+07 0.00393525 2.77121e+07 49.7565 0.00183673 0.96992 0 50.3573 GTEX-WH7G-0008-SM-4LVNM B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 371 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991034 465442 0.976043 0.991703 0.846579 20312 1 76 0.00191929 151 0 6.81836e+07 0.0236335 284227 6.87541e+07 4.9266e+06 20326 3.39232e+07 0 0.129464 0.991703 0.839555 6.81836e+07 0.00256367 1.52055e+07 8.9607e+06 1.53496e+07 150 1.53499e+07 1.65959e+07 0.00224126 1.52616e+07 49.8558 0.00413397 0.992372 0 50.2358 GTEX-WH7G-0326-SM-3NMBH 1 B1 2 pieces, 8x5 & 13x6mm; No extraneous tissue. 8.3 Heart Heart - Atrial Appendage 0006631 265 972 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991851 429341 0.974174 0.994199 0.856002 21619 1 76 0.00252375 368 0 9.54273e+07 0.0255603 1.87718e+06 9.59841e+07 1.11264e+07 21634 4.74983e+07 0 0.118172 0.994199 0.851036 9.54273e+07 0.00399444 2.05924e+07 1.54808e+07 2.06205e+07 334 2.05257e+07 1.51754e+07 0.00325736 2.0888e+07 50.4375 0.0195572 0.996546 0 50.0341 GTEX-WH7G-0426-SM-3NMBJ 1 B1 2 pieces, 9x8 & 10x9mm; No extraneous tissue. 8.4 Heart Heart - Left Ventricle 0006566 268 969 BP-27751 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.993134 424800 0.980379 0.995196 0.877243 21770 1 76 0.00250692 372 0 1.25434e+08 0.0193886 2.35658e+06 1.26039e+08 1.42302e+07 21785 6.24785e+07 0 0.103135 0.995196 0.873029 1.25434e+08 0.00377869 2.75389e+07 1.98109e+07 2.77875e+07 335 2.75551e+07 2.0605e+07 0.00314149 2.79953e+07 50.3962 0.0186972 0.997259 0 50.2247 GTEX-WH7G-0526-SM-3NMBI 1 B1 2 pieces, 10x6 & 11x7mm; No extraneous tissue. 6.1 Thyroid Thyroid 0002046 271 966 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.98893 363117 0.965249 0.991401 0.785229 24179 1 76 0.00281353 269 0 9.60956e+07 0.0344545 429476 9.69291e+07 1.18095e+07 24223 4.77914e+07 0 0.18002 0.991401 0.778477 9.60956e+07 0.00420288 2.10314e+07 1.29492e+07 2.10678e+07 256 2.10979e+07 1.50842e+07 0.00350647 2.1222e+07 50.1466 0.00443083 0.993871 0 50.0432 GTEX-WH7G-0626-SM-4LVMO 1 B1 6 pieces, up to 10x2mm; No plaques. No extraneous tissue. 6.8 Blood Vessel Artery - Aorta 0001496 277 961 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.991741 300994 0.975445 0.992337 0.84965 20696 1 76 0.00213094 134 0 5.8179e+07 0.0241358 136005 5.86283e+07 4.45772e+06 20706 2.89454e+07 0 0.125795 0.992337 0.84314 5.8179e+07 0.00278804 1.25575e+07 5.73508e+06 1.26744e+07 144 1.2649e+07 1.13815e+07 0.00245929 1.2624e+07 49.9505 0.00231978 0.992934 0 50.2318 GTEX-WH7G-0726-SM-3NMBM 1 B1 2 pieces, 7.5x5 & 10x7mm; Vascular sclerosis, focal emphysema and fibrosis; focus of aspiration pneumonia 7.7 Lung Lung 0008952 278 960 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992101 330029 0.975124 0.99421 0.827062 25002 1 76 0.00288093 275 0 1.11303e+08 0.0244948 570606 1.11951e+08 1.26135e+07 25034 5.54125e+07 0 0.148062 0.99421 0.822274 1.11303e+08 0.00423114 2.47139e+07 1.2314e+07 2.48398e+07 330 2.48476e+07 2.04902e+07 0.0035546 2.493e+07 50.0827 0.00509693 0.996318 0 50.1271 GTEX-WH7G-0726-SM-5EGIX 1 B1 2 pieces, 7.5x5 & 10x7mm; Vascular sclerosis, focal emphysema and fibrosis; focus of aspiration pneumonia 7.7 Lung Lung 0008952 278 960 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-4764 02/09/2014 TruSeq.v1 EXCLUDE 0.98565 246405 0.975657 0.990572 0.824816 23660 1 76 0.00240114 157 0 7.07788e+07 0.0239741 405955 7.14525e+07 1.08648e+07 23679 3.51308e+07 0 0.150841 0.990572 0.81704 7.07788e+07 0.00577119 1.56632e+07 7.96907e+06 1.57682e+07 166 1.58318e+07 1.27062e+07 0.0040778 1.59314e+07 50.1567 0.00568147 0.995494 0 50.167 GTEX-WH7G-0726-SM-5EQ6C 1 B1 2 pieces, 7.5x5 & 10x7mm; Vascular sclerosis, focal emphysema and fibrosis; focus of aspiration pneumonia 7.7 Lung Lung 0008952 278 960 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-4767 02/09/2014 TruSeq.v1 EXCLUDE 0.989648 340722 0.976881 0.992861 0.830096 23709 1 76 0.00206262 206 0 7.97806e+07 0.0227072 407154 8.03543e+07 1.10447e+07 23728 3.96702e+07 0 0.146785 0.992861 0.82417 7.97806e+07 0.00308091 1.76961e+07 8.94516e+06 1.78401e+07 220 1.78715e+07 1.49389e+07 0.00257012 1.79055e+07 50.0475 0.00506699 0.996073 0 50.2026 GTEX-WH7G-0826-SM-4LVMR 1 B1 2 pieces, 11x7 & 8x8mm; 10% adipose in one, none in the other; many islets 6.6 Pancreas Pancreas 0001150 280 959 BP-27491 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990665 297732 0.978767 0.991457 0.863135 19762 1 76 0.00238607 113 0 5.93164e+07 0.0208822 109836 5.98276e+07 4.31752e+06 19774 2.95057e+07 0 0.115632 0.991457 0.855761 5.93164e+07 0.00318257 1.36686e+07 1.61756e+07 1.38776e+07 118 1.38101e+07 1.80424e+07 0.002784 1.37923e+07 49.9678 0.00183588 0.992249 0 50.3793 GTEX-WH7G-0926-SM-4LVMJ 1 B1 6 pieces, up to 7x2mm; Well sampled mucosa. 8.2 Esophagus Esophagus - Mucosa 0006920 282 958 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.989747 315692 0.978357 0.990586 0.848958 21904 1 76 0.00219301 158 0 6.74179e+07 0.0212074 354508 6.80586e+07 4.88459e+06 21918 3.35377e+07 0 0.129399 0.990586 0.840966 6.74179e+07 0.00290265 1.51635e+07 8.44209e+06 1.53062e+07 163 1.52801e+07 1.3526e+07 0.00254753 1.52467e+07 49.9452 0.00520887 0.991426 0 50.2342 GTEX-WH7G-1026-SM-4LVML 1 B1 6 pieces, up to 10x6mm; Well sampled muscularis propria 7.9 Esophagus Esophagus - Muscularis 0004648 285 955 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990212 314888 0.976803 0.991629 0.850344 20846 1 76 0.00206771 149 0 5.84367e+07 0.0229208 367794 5.893e+07 4.28916e+06 20855 2.90494e+07 0 0.126459 0.991629 0.843225 5.84367e+07 0.00285891 1.26227e+07 5.06138e+06 1.27617e+07 153 1.27251e+07 1.01866e+07 0.00246275 1.27438e+07 50.0366 0.0062412 0.993046 0 50.2739 GTEX-WH7G-1126-SM-3NMBK 1 B1 2 pieces, 10x6 & 8x5.5mm; Artefactual fractures. 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 286 954 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989658 276753 0.975922 0.992011 0.835434 23392 1 76 0.00278026 376 0 1.1812e+08 0.0238214 957832 1.19071e+08 1.51629e+07 23423 5.87825e+07 0 0.140487 0.992011 0.82876 1.1812e+08 0.00408329 2.60279e+07 1.32922e+07 2.62658e+07 337 2.62679e+07 1.87956e+07 0.00343023 2.62885e+07 50.0196 0.0080442 0.994364 0 50.2275 GTEX-WH7G-1326-SM-4LVMS 1 B1 5 pieces, up to 5x3mm; Mostly submucosa, variable amounts of mucosa and muscularis propria 7.5 Colon Colon - Transverse 0001157 292 955 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988541 296585 0.975308 0.990285 0.818535 22473 1 76 0.00227538 158 0 6.33568e+07 0.0239782 833893 6.39784e+07 4.84699e+06 22495 3.14775e+07 0 0.156773 0.990285 0.810583 6.33568e+07 0.00307987 1.39907e+07 7.92203e+06 1.4151e+07 166 1.41259e+07 9.11972e+06 0.00267692 1.41196e+07 49.9888 0.013034 0.992029 0 50.2848 GTEX-WH7G-1426-SM-4LVMU 1 B1 6 pieces, up to 10x4mm; All have muscularis propria (our target) but 5 of 6 have (unwanted) mucosa 7.8 Colon Colon - Sigmoid 0001159 307 941 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632,LCSET-4104 10/13/2013 TruSeq.v1 RNASEQ 0.983796 351340 0.972631 0.987693 0.798729 23623 1 76 0.00249594 193 0 7.70022e+07 0.0261131 808625 7.79617e+07 7.7593e+06 23655 3.81678e+07 0 0.173902 0.987693 0.788899 7.70022e+07 0.00365267 1.70865e+07 1.0261e+07 1.71519e+07 201 1.72343e+07 1.13973e+07 0.00307202 1.72804e+07 50.0667 0.0103721 0.99159 0 50.0955 GTEX-WH7G-1526-SM-4LVMX 1 B1 6 pieces, up to 12x5mm; Good well preserved mucosa. 8.4 Stomach Stomach 0000945 311 937 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.990444 265987 0.978658 0.991684 0.864594 20390 1 76 0.00201933 146 0 5.81767e+07 0.0210152 221332 5.86646e+07 4.33782e+06 20399 2.89341e+07 0 0.114064 0.991684 0.857404 5.81767e+07 0.00275974 1.27002e+07 4.68685e+06 1.28431e+07 144 1.28116e+07 1.18836e+07 0.00238907 1.28041e+07 49.9855 0.00377284 0.992924 0 50.2798 GTEX-WH7G-1626-SM-4LVMY 2 B1 6 pieces, up to 9x4mm; 4 of 6 have targeted 6 pieces, up to mucosa/submucosa with lymphoid tissue, but 5 of 6 have (unwanted) muscularis propria. 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 318 932 BP-27493 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.987662 296132 0.966154 0.989327 0.782427 22937 1 76 0.00246698 130 0 5.45431e+07 0.0331878 314384 5.51315e+07 4.19898e+06 22959 2.70787e+07 0 0.183728 0.989327 0.774076 5.45431e+07 0.00339577 1.20181e+07 6.36241e+06 1.2132e+07 142 1.21208e+07 8.01245e+06 0.00293059 1.21216e+07 50.0017 0.00570243 0.990993 0 50.2358 GTEX-WH7G-1726-SM-4LVKY 2 B1 2 pieces, 9x7 & 8x8mm; Stromal hyperplasia; 1 has periurethral ducts and glands 6.4 Prostate Prostate 0002367 324 927 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988116 250954 0.966125 0.989582 0.767713 23948 1 76 0.00225521 136 0 5.57884e+07 0.0336072 276920 5.63757e+07 4.39246e+06 23968 2.7713e+07 0 0.198412 0.989582 0.759715 5.57884e+07 0.0032782 1.21824e+07 6.4286e+06 1.23919e+07 149 1.23617e+07 7.80115e+06 0.00276595 1.22976e+07 49.87 0.00491205 0.991049 0 50.4263 GTEX-WH7G-1926-SM-4LVMM 2 B1 2 pieces, 8x6 & 8x7mm; Moderate tubular and interstitial fibrosis; decreased spermatogenesis. 6 Testis Testis 0000473 355 897 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-3632 08/08/2013 TruSeq.v1 RNASEQ 0.988728 393163 0.93212 0.989879 0.741658 31450 1 76 0.00225894 148 0 6.67769e+07 0.0675957 625664 6.74596e+07 5.03018e+06 31505 3.31955e+07 0 0.190463 0.989879 0.734152 6.67769e+07 0.00306303 1.39405e+07 9.59805e+06 1.40291e+07 151 1.40398e+07 1.01832e+07 0.00266052 1.40052e+07 49.9384 0.00927464 0.99103 0 50.1584 GTEX-WH7G-2026-SM-3NMBL 1 B1 6 pieces, up to 8x3mm; Subcutaneous adipose is well trimmed. 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 329 923 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988081 291641 0.9754 0.990394 0.848133 23598 1 76 0.00298647 280 0 1.05059e+08 0.0242825 527780 1.06078e+08 1.28532e+07 23615 5.2291e+07 0 0.127267 0.990394 0.839986 1.05059e+08 0.00438745 2.3211e+07 2.02955e+07 2.33712e+07 326 2.33596e+07 1.89186e+07 0.00368533 2.34586e+07 50.1056 0.0049754 0.992707 0 50.172 GTEX-WH7G-2126-SM-4M1XU 1 B1 3 pieces, up to 3x2mm; 3 good well trimmed glands; smallest has 30% (0.5 sq mm) peripheral adipose . 7.9 Salivary Gland Minor Salivary Gland 0006330 358 894 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989954 157203 0.973511 0.99202 0.802137 22563 1 76 0.00217602 131 0 5.47997e+07 0.024729 179522 5.52405e+07 1.86684e+06 22582 2.72278e+07 0 0.171375 0.99202 0.795736 5.47997e+07 0.00292198 1.21955e+07 6.44708e+06 1.23228e+07 141 1.23279e+07 9.25867e+06 0.00254822 1.23014e+07 49.9462 0.00324983 0.994086 0 50.2597 GTEX-WH7G-2226-SM-3NMBN 1 B1 2 pieces, 9x8 & 10x8mm; Only small central 'unfixed' holes. Otherwise good specimen. 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 374 878 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990156 205962 0.975172 0.992658 0.808133 23843 1 76 0.00281188 277 0 9.98449e+07 0.0245354 425634 1.00583e+08 1.27018e+07 23875 4.96705e+07 0 0.167039 0.992658 0.8022 9.98449e+07 0.00416749 2.19445e+07 1.03772e+07 2.20362e+07 302 2.20717e+07 1.74042e+07 0.00348797 2.21483e+07 50.0867 0.00423165 0.99516 0 50.1043 GTEX-WH7G-2326-SM-3NMBC 1 B1 6 pieces, up to 7x3mm; Subcutaneous adipose is well trimmed. Abundant sweat glands. 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 376 879 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.987092 306377 0.972185 0.989882 0.79869 23649 1 76 0.00293164 179 0 8.05036e+07 0.0275558 438572 8.13264e+07 1.03324e+07 23677 3.99963e+07 0 0.173494 0.989882 0.790609 8.05036e+07 0.00431744 1.77052e+07 1.0079e+07 1.77027e+07 190 1.77287e+07 1.34333e+07 0.00362259 1.7893e+07 50.2305 0.00539274 0.992672 0 49.9964 GTEX-WH7G-2626-SM-3NMBE 1 B1 2 pieces, 5x4 & 3x2.5mm; ~30% adipose in 1 piece. 6.8 Nerve Nerve - Tibial 0001323 394 861 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989849 243559 0.969306 0.992061 0.798181 24204 1 76 0.00283092 285 0 9.38703e+07 0.0304096 328688 9.46215e+07 1.0836e+07 24237 4.67089e+07 0 0.171125 0.992061 0.791845 9.38703e+07 0.00407123 2.06194e+07 1.01161e+07 2.06613e+07 266 2.0672e+07 1.57214e+07 0.00344969 2.08052e+07 50.1605 0.00347371 0.994274 0 50.0508 GTEX-WHPG-0002-SM-3PYK5 B1 Blood Whole Blood 0013756 -114 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R05C01 GTEX-WHPG-0002-SM-3PZ77 B1 Blood Whole Blood 0013756 -114 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8976358006_R01C01 GTEX-WHPG-0002-SM-3USR1 B1 Blood Whole Blood 0013756 -114 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-WHPG-0002-SM-5URBH B1 Blood Whole Blood 0013756 -114 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 LCSET-5270,LCSET-5435 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WHPG-0004-SM-3NMDO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -113 BP-31430 RNA isolation_Trizol Manual (Cell Pellet) 09/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990841 746859 0.964731 0.993077 0.783064 22694 1 76 0.00298343 219 0 1.0941e+08 0.0345082 764810 1.10173e+08 1.3323e+07 22740 5.44185e+07 0 0.181667 0.993077 0.777643 1.0941e+08 0.00424411 2.44473e+07 1.83444e+07 2.3994e+07 249 2.40879e+07 2.36621e+07 0.00361235 2.45937e+07 50.5195 0.00694193 0.995313 0 49.5321 GTEX-WHPG-0006-SM-3NMBV B1 8.1 Blood Whole Blood 0013756 -115 BP-26980 RNA isolation_PAXgene Blood RNA (Manual) 07/05/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.98414 2.22663e+06 0.915514 0.986746 0.758209 20085 1 76 0.00323995 155 0 1.0025e+08 0.0838343 349507 1.01596e+08 1.28376e+07 20104 4.98683e+07 0 0.157305 0.986746 0.748159 1.0025e+08 0.00506044 2.11243e+07 1.26378e+08 2.15258e+07 178 2.15514e+07 2.03867e+07 0.00414779 2.14092e+07 49.8345 0.00344015 0.989351 0 50.4706 GTEX-WHPG-0008-SM-4M1ZQ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 310 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.99084 396533 0.977492 0.993601 0.849268 19954 1 76 0.00157891 148 0 6.46894e+07 0.0221659 235835 6.5106e+07 2.33272e+06 19963 3.21836e+07 0 0.128224 0.993601 0.843834 6.46894e+07 0.00229361 1.4352e+07 7.40831e+06 1.45507e+07 146 1.46226e+07 1.55787e+07 0.00193527 1.44612e+07 49.7225 0.00362232 0.996363 0 50.3438 GTEX-WHPG-0226-SM-3NMB9 1 B1 2 pieces, 9x6 & 9x5.5mm; focal fibrosis 7.2 Thyroid Thyroid 0002046 230 1186 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.99061 313236 0.965595 0.992936 0.760853 25062 1 76 0.00288252 204 0 9.17329e+07 0.0341304 466688 9.23855e+07 1.08788e+07 25110 4.56372e+07 0 0.204742 0.992936 0.755479 9.17329e+07 0.00415992 2.01193e+07 1.00607e+07 2.01142e+07 212 2.01587e+07 1.4728e+07 0.00351972 2.02712e+07 50.1391 0.00505153 0.995262 0 49.9937 GTEX-WHPG-0326-SM-4M1XV 1 B1 2 pieces, 7x6 & 8x6mm; ~10% internal adipose; good islets 7.1 Pancreas Pancreas 0001150 233 1184 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.988066 221458 0.973624 0.990867 0.835944 20131 1 76 0.00196764 120 0 5.61318e+07 0.0260959 183298 5.66492e+07 2.1434e+06 20144 2.79228e+07 0 0.13768 0.990867 0.828309 5.61318e+07 0.00276078 1.27224e+07 1.26174e+07 1.29773e+07 131 1.2951e+07 1.51914e+07 0.00236309 1.2916e+07 49.9323 0.00323567 0.993668 0 50.496 GTEX-WHPG-0426-SM-4M1XW 1 B1 6 pieces, up to 7x6mm; fundic mucosa, chronic gastritis with atrophy, no intestinal metaplasia 8 Stomach Stomach 0000945 249 1169 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633,LCSET-4056 09/09/2013 TruSeq.v1 RNASEQ 0.989943 227263 0.976194 0.99186 0.832606 23369 1 76 0.00214514 202 0 8.31993e+07 0.0232093 605839 8.38821e+07 3.43577e+06 23390 4.14021e+07 0 0.143588 0.99186 0.825828 8.31993e+07 0.00282677 1.85591e+07 1.40403e+07 1.87883e+07 213 1.87668e+07 1.51775e+07 0.0024853 1.87394e+07 49.9635 0.00722251 0.993777 0 50.3069 GTEX-WHPG-0626-SM-3NMBD 0 B1 2 pieces, 9x7 & 10x7mm; lobulated, no fixation artifacts 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 250 1171 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990557 414610 0.973871 0.992736 0.837821 24606 1 76 0.00286453 377 0 1.21382e+08 0.0257981 1.08844e+06 1.2227e+08 1.45559e+07 24637 6.04267e+07 0 0.13605 0.992736 0.831735 1.21382e+08 0.0042162 2.6786e+07 1.44811e+07 2.69287e+07 343 2.69142e+07 1.96704e+07 0.00353888 2.70521e+07 50.1278 0.00890192 0.994915 0 50.1329 GTEX-WHPG-0726-SM-4M1XX 1 B1 2 pieces, 4x2.5 & 3x2mm; no plaques; ~40% surrounding adipose, up to 1 mm thick 8.4 Blood Vessel Artery - Coronary 0001621 251 1171 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.990665 175098 0.973937 0.992508 0.837632 21522 1 76 0.00180551 127 0 5.35902e+07 0.0256743 213297 5.39948e+07 1.8015e+06 21531 2.66797e+07 0 0.136304 0.992508 0.831356 5.35902e+07 0.002496 1.15912e+07 4.0137e+06 1.17497e+07 136 1.17025e+07 9.97007e+06 0.00215011 1.1737e+07 50.0736 0.00395033 0.99435 0 50.3396 GTEX-WHPG-0826-SM-3NMBF 1 B1 2 pieces, 7x7 & 7x7mm; ~10% internal adipose around blood vessels; contraction bands 8.9 Heart Heart - Left Ventricle 0006566 252 1171 BP-27871 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.993322 332574 0.98321 0.995305 0.876756 21834 1 76 0.00292454 269 0 1.18394e+08 0.0165241 2.76241e+06 1.18953e+08 1.30942e+07 21845 5.89778e+07 0 0.106455 0.995305 0.87264 1.18394e+08 0.00422016 2.61964e+07 1.90687e+07 2.62527e+07 327 2.61295e+07 1.8989e+07 0.00357106 2.65358e+07 50.3858 0.0232227 0.997288 0 50.0537 GTEX-WHPG-0926-SM-4M1XY 0 B1 6 pieces, up to 7x3mm; preserved endothelium, punctate medial calcification, 1 mm adventitial adipose on all sides 8.3 Blood Vessel Artery - Aorta 0001496 254 1170 BP-27871 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989975 182412 0.977428 0.99269 0.844352 21976 1 76 0.00186337 126 0 5.51703e+07 0.0220171 183136 5.55766e+07 1.86756e+06 21991 2.74377e+07 0 0.133076 0.99269 0.838179 5.51703e+07 0.00267277 1.21282e+07 4.28066e+06 1.22695e+07 144 1.22832e+07 1.03025e+07 0.00226697 1.22626e+07 49.9581 0.0032952 0.995404 0 50.2896 GTEX-WHPG-1026-SM-3NMBA 0 B1 2 pieces, 9x6 & 8x5mm; preserved endothemium 7.8 Heart Heart - Atrial Appendage 0006631 257 1168 BP-27871 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991757 281441 0.976958 0.993974 0.851041 23379 1 76 0.00303932 266 0 9.77808e+07 0.0228008 2.07014e+06 9.83735e+07 1.2117e+07 23399 4.86668e+07 0 0.125917 0.993974 0.845912 9.77808e+07 0.00431762 2.13212e+07 1.23536e+07 2.14536e+07 326 2.1338e+07 1.42546e+07 0.00367704 2.16187e+07 50.3267 0.0210437 0.996192 0 50.1548 GTEX-WHPG-1126-SM-4M1XT 0 B1 6 pieces, up to 9.5x3mm; hyperplastic squamous epithelium 8.7 Esophagus Esophagus - Mucosa 0006920 258 1169 BP-27871 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989683 148916 0.977407 0.991671 0.834223 21348 1 76 0.00209513 130 0 5.60916e+07 0.0222077 373854 5.65627e+07 1.99522e+06 21360 2.79321e+07 0 0.143184 0.991671 0.827275 5.60916e+07 0.00278077 1.25422e+07 7.3447e+06 1.27293e+07 135 1.27211e+07 1.10234e+07 0.00243727 1.26589e+07 49.8776 0.00660955 0.993658 0 50.37 GTEX-WHPG-1226-SM-4M1ZI 1 B1 4 pieces, up to 8x5mm; all muscularis, good specimen 7 Esophagus Esophagus - Muscularis 0004648 260 1169 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.991374 316158 0.968943 0.993634 0.818521 21889 1 76 0.00183011 133 0 5.90336e+07 0.030772 395066 5.94118e+07 1.9758e+06 21903 2.93839e+07 0 0.150422 0.993634 0.813311 5.90336e+07 0.00250566 1.26307e+07 7.08288e+06 1.28028e+07 150 1.27833e+07 9.99334e+06 0.00216712 1.27844e+07 50.0023 0.00664962 0.995895 0 50.3382 GTEX-WHPG-1326-SM-4M1ZJ 1 B1 6 pieces, up to 7x5mm; 3 with muscle (target), 3 with fundic mucosa, no muscle 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 261 1169 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-3633 08/24/2013 TruSeq.v1 EXCLUDE 0.988067 333782 0.970403 0.990978 0.814338 23107 1 76 0.00232634 131 0 6.10458e+07 0.0284962 354876 6.16016e+07 2.18233e+06 23124 3.03283e+07 0 0.156065 0.990978 0.806991 6.10458e+07 0.00325383 1.35657e+07 1.04888e+07 1.37156e+07 148 1.37463e+07 1.11243e+07 0.00278872 1.372e+07 49.9521 0.00576083 0.993888 0 50.2748 GTEX-WHPG-1426-SM-3NMBB 1 B1 2 pieces, 8.5x5 & 7x5.5mm; emphysema; carbon laden macrophages focally in lymphoid nodule 8.2 Lung Lung 0008952 265 1166 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.98987 569860 0.967163 0.992376 0.805832 24723 1 76 0.00300745 207 0 9.21234e+07 0.0324591 410154 9.28312e+07 1.11295e+07 24757 4.58132e+07 0 0.161331 0.992376 0.799689 9.21234e+07 0.00443084 2.03614e+07 1.37564e+07 2.04387e+07 222 2.04938e+07 1.62481e+07 0.00371735 2.05347e+07 50.0499 0.00441828 0.994883 0 50.0947 GTEX-WHPG-1526-SM-4M1ZK 1 B1 2 pieces, 9x6 & 9.5x6mm; good parenchyma, but 40-50% of aliquot is surrounding adipose tissue, up to 2.5 mm thick 7.5 Adrenal Gland Adrenal Gland 0002369 270 1162 BP-27938 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3633,LCSET-4056 09/09/2013 TruSeq.v1 RNASEQ 0.992154 268949 0.976333 0.994037 0.845025 22363 1 76 0.00184018 164 0 7.62031e+07 0.0233498 1.31741e+06 7.66602e+07 3.13214e+06 22375 3.79489e+07 0 0.131308 0.994037 0.839986 7.62031e+07 0.00250504 1.67882e+07 7.86617e+06 1.70262e+07 201 1.69801e+07 1.28422e+07 0.00217198 1.69769e+07 49.9953 0.0171851 0.99592 0 50.352 GTEX-WHPG-1626-SM-4M1ZL 1 B1 6 pieces, up to 6x2.5mm; Well-sampled muscularis (without mucosa); good ganglion cells. 7.6 Colon Colon - Sigmoid 0001159 277 1156 BP-27938 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3633,LCSET-4056 09/09/2013 TruSeq.v1 RNASEQ 0.992244 239552 0.976092 0.994224 0.849144 22523 1 76 0.00176483 198 0 8.18765e+07 0.0236307 628127 8.23522e+07 3.40576e+06 22538 4.07624e+07 0 0.126948 0.994224 0.844239 8.18765e+07 0.00253935 1.77332e+07 6.24485e+06 1.79763e+07 226 1.79067e+07 1.37679e+07 0.00215132 1.79622e+07 50.0773 0.00762733 0.996204 0 50.3404 GTEX-WHPG-2126-SM-4M1ZM 1 B1 2 pieces, 8x8 & 8x6mm; Fibroadipose tissue (~30% fibrous stroma admixed); no fixation or traumatic artifacts 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 303 1135 BP-27938 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.990187 140808 0.972374 0.99266 0.820634 21880 1 76 0.00187327 132 0 4.96873e+07 0.0273679 280334 5.00547e+07 1.8164e+06 21894 2.47216e+07 0 0.15174 0.99266 0.81461 4.96873e+07 0.00258978 1.09013e+07 4.0013e+06 1.10465e+07 134 1.10307e+07 8.29595e+06 0.00223063 1.10372e+07 50.0147 0.00560055 0.995133 0 50.3308 GTEX-WHPG-2226-SM-3NMBO 1 B1 2 pieces, 9x6 & 11.5x7mm; Contraction bands 8.1 Muscle Muscle - Skeletal 0011907 305 1134 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988685 392815 0.978632 0.991019 0.877699 21169 1 76 0.00276967 272 0 1.05551e+08 0.021063 1.15315e+06 1.06508e+08 1.26112e+07 21183 5.25318e+07 0 0.100933 0.991019 0.869816 1.05551e+08 0.0042252 2.23507e+07 1.4758e+07 2.24545e+07 328 2.24341e+07 2.12045e+07 0.00349572 2.25936e+07 50.1771 0.0108269 0.993353 0 50.1158 GTEX-WHPG-2326-SM-3NMBP 0 B1 2 pieces, 3x2 & 3x3mm; Well trimmed of extraneous tissue. 7.9 Blood Vessel Artery - Tibial 0007610 306 1137 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990481 399097 0.967042 0.992849 0.798357 23909 1 76 0.00294496 277 0 1.13079e+08 0.032616 661999 1.13894e+08 1.387e+07 23945 5.6237e+07 0 0.168685 0.992849 0.792648 1.13079e+08 0.00430816 2.41997e+07 1.1592e+07 2.43275e+07 328 2.43178e+07 1.91117e+07 0.00362494 2.44664e+07 50.1524 0.00581244 0.995217 0 50.1317 GTEX-WHPG-2426-SM-3NMBQ 1 B1 2 pieces, 5.5x3 & 6.5x2mm; 0.5 mm rim of adipose around 1 piece; ~10% inner and outer adipose on the other 7.2 Nerve Nerve - Tibial 0001323 307 1134 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 EXCLUDE 0.990009 328158 0.971753 0.992338 0.852911 24089 1 76 0.00298333 298 0 9.4702e+07 0.0279997 743458 9.54332e+07 1.18677e+07 24112 4.71249e+07 0 0.118842 0.992338 0.846376 9.4702e+07 0.00441629 2.0671e+07 1.31797e+07 2.07112e+07 272 2.07081e+07 1.73414e+07 0.00369813 2.08906e+07 50.2194 0.00779035 0.994668 0 50.0486 GTEX-WHPG-2626-SM-3NMBR 1 B1 6 pieces, up to 9x4mm; up to 2 mm thick band of subcutaneous adipose tissue 6.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 314 1130 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.986587 496380 0.960957 0.989079 0.782841 25338 1 76 0.00314747 304 0 1.0291e+08 0.0387963 1.09282e+06 1.04046e+08 1.3272e+07 25371 5.11862e+07 0 0.178115 0.989079 0.774292 1.0291e+08 0.0046845 2.23533e+07 2.07527e+07 2.23224e+07 274 2.23555e+07 1.63766e+07 0.00391405 2.25703e+07 50.2391 0.0105033 0.991571 0 49.9654 GTEX-WHSB-0002-SM-4M1ZR B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -68 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3633,LCSET-4056 09/09/2013 TruSeq.v1 RNASEQ 0.990747 663804 0.973047 0.992477 0.735402 21036 1 76 0.00209792 151 0 8.25035e+07 0.0265023 535237 8.31288e+07 3.24443e+06 21079 4.10437e+07 0 0.237645 0.992477 0.72987 8.25035e+07 0.00269473 1.84407e+07 9.20134e+06 1.86099e+07 156 1.86822e+07 1.72452e+07 0.00239581 1.8519e+07 49.7806 0.00643865 0.994207 0 50.2282 GTEX-WHSB-0004-SM-3G3RY B1 Blood Whole Blood 0013756 -68 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8514840042_R01C01 GTEX-WHSB-0004-SM-3G3SZ B1 Blood Whole Blood 0013756 -68 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134855139_R01C01 GTEX-WHSB-0004-SM-3USQY B1 Blood Whole Blood 0013756 -68 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-WHSB-0004-SM-5URDE B1 Blood Whole Blood 0013756 -68 BP-26880 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/02/2012 LCSET-5270 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WHSB-0005-SM-3LK7C B1 8.4 Blood Whole Blood 0013756 -68 BP-26980 RNA isolation_PAXgene Blood RNA (Manual) 07/05/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.962504 1.27611e+06 0.94347 0.963629 0.781902 19783 1 76 0.00248463 157 0 9.75095e+07 0.055973 381628 1.0119e+08 9.2104e+06 19796 4.84761e+07 0 0.161568 0.963629 0.753463 9.75095e+07 0.0039354 2.1261e+07 8.98351e+07 2.1532e+07 181 2.15736e+07 2.10545e+07 0.00320917 2.13711e+07 49.7642 0.0037714 0.964754 0 50.3167 GTEX-WHSB-0008-SM-4M1ZP B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 290 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.991553 345000 0.974283 0.993659 0.829578 20886 1 76 0.00159692 158 0 7.32571e+07 0.0253292 96344 7.37246e+07 2.57677e+06 20911 3.6478e+07 0 0.144706 0.993659 0.824317 7.32571e+07 0.00220378 1.6281e+07 7.11938e+06 1.64057e+07 164 1.64759e+07 1.58376e+07 0.00189971 1.63595e+07 49.8228 0.00130681 0.995765 0 50.1906 GTEX-WHSB-0226-SM-4M1XE 1 B1 6 pieces ~9x2mm, ~303% thickness is serosa/vasa vasorum, rep. imtmia/media delineated 7.8 Blood Vessel Artery - Aorta 0001496 219 886 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.990062 186497 0.974191 0.992495 0.822878 21649 1 76 0.00169799 141 0 5.81795e+07 0.0254235 141884 5.86194e+07 2.1394e+06 21661 2.89425e+07 0 0.151312 0.992495 0.816703 5.81795e+07 0.00254444 1.25658e+07 3.78111e+06 1.27642e+07 153 1.27373e+07 1.04045e+07 0.00212018 1.27312e+07 49.9881 0.00242043 0.994929 0 50.3917 GTEX-WHSB-0326-SM-3LK6K 1 B1 2 pieces ~7x6mm. Emphysematous changes noted 8.4 Lung Lung 0008952 225 881 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 EXCLUDE 0.82262 238228 0.97214 0.821816 0.826034 23657 1 76 0.00230184 200 0 8.29559e+07 0.0274614 319673 1.00942e+08 9.54368e+06 23686 4.11916e+07 0 0.146105 0.821816 0.678849 8.29559e+07 0.00364913 1.83725e+07 9.81622e+06 1.85811e+07 203 1.84967e+07 1.58795e+07 0.00297614 1.83868e+07 49.851 0.00316689 0.821013 0 50.2822 GTEX-WHSB-0326-SM-5FQSD 1 B1 2 pieces ~7x6mm. Emphysematous changes noted 8.4 Lung Lung 0008952 225 881 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989145 341143 0.975171 0.992588 0.831473 24223 1 76 0.00224038 277 0 9.8072e+07 0.0244305 460520 9.88044e+07 1.45508e+07 24248 4.87631e+07 0 0.143698 0.992588 0.82531 9.8072e+07 0.0036586 2.17425e+07 1.07444e+07 2.19015e+07 281 2.19444e+07 1.86624e+07 0.00294703 2.20237e+07 50.0902 0.00466093 0.996032 0 50.1821 GTEX-WHSB-0326-SM-5GICB 1 B1 2 pieces ~7x6mm. Emphysematous changes noted 8.4 Lung Lung 0008952 225 881 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-4796 02/27/2014 TruSeq.v1 EXCLUDE 0.990902 262932 0.975527 0.993008 0.834544 22620 1 76 0.00263288 136 0 6.46666e+07 0.0241077 273542 6.5122e+07 7.46514e+06 22640 3.21895e+07 0 0.140983 0.993008 0.828708 6.46666e+07 0.00329347 1.43576e+07 6.1783e+06 1.44656e+07 151 1.44794e+07 1.22123e+07 0.00296247 1.44746e+07 49.9917 0.00420046 0.995113 0 50.1874 GTEX-WHSB-0426-SM-4M1XI 0 B1 6 pieces ~7x2.5mm ~10 thickness is squamous mucosa, well preserved 9.4 Esophagus Esophagus - Mucosa 0006920 232 874 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.991291 243175 0.971752 0.993352 0.827796 21396 1 76 0.00180546 133 0 5.75293e+07 0.0277885 263095 5.79143e+07 1.92844e+06 21409 2.86358e+07 0 0.143957 0.993352 0.822292 5.75293e+07 0.00256903 1.28102e+07 9.05703e+06 1.30239e+07 142 1.30296e+07 1.13925e+07 0.00218645 1.29242e+07 49.7969 0.00454283 0.995413 0 50.4137 GTEX-WHSB-0526-SM-4M1XM 0 B1 6 pieces ~8x4mm, rare submucosal glands noted, rep ones encircled 7.9 Esophagus Esophagus - Muscularis 0004648 236 871 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.991237 181128 0.976257 0.993639 0.844469 20702 1 76 0.00161233 136 0 5.34053e+07 0.0234465 328587 5.37472e+07 1.83986e+06 20713 2.65732e+07 0 0.131787 0.993639 0.839098 5.34053e+07 0.00240627 1.15251e+07 3.79047e+06 1.17002e+07 147 1.16713e+07 9.53212e+06 0.00200834 1.16779e+07 50.0142 0.00611356 0.996042 0 50.3771 GTEX-WHSB-0626-SM-4M1XP 0 B1 5 pieces ~7x2mm, ~50% squamous mucosa, minimal muscle 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 240 867 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 EXCLUDE 0.990585 185636 0.972821 0.993115 0.804052 23120 1 76 0.00179935 142 0 6.21005e+07 0.0267031 260137 6.2531e+07 2.07637e+06 23143 3.08868e+07 0 0.168769 0.993115 0.798517 6.21005e+07 0.00268334 1.36031e+07 5.31457e+06 1.37676e+07 158 1.37509e+07 1.05831e+07 0.00224021 1.37731e+07 50.0403 0.00416013 0.995646 0 50.3005 GTEX-WHSB-0726-SM-4M1XQ 1 B1 2 pieces ~9x7mm. ~80% well-preserved parenchyma, deliniated ,rest adherent fat up to ~1.5mm thick 7.1 Pancreas Pancreas 0001150 241 867 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989271 209815 0.97585 0.991909 0.84091 20834 1 76 0.00196276 110 0 5.87877e+07 0.0239881 129989 5.92673e+07 2.15431e+06 20846 2.92642e+07 0 0.13494 0.991909 0.834106 5.87877e+07 0.00270653 1.33718e+07 1.29882e+07 1.35824e+07 120 1.36203e+07 1.5706e+07 0.00233365 1.34908e+07 49.761 0.00219327 0.994547 0 50.3907 GTEX-WHSB-0926-SM-4M1XJ 1 B1 6 pieces ~6x2.5mm, 10% mucosa, relatively well preserved 7.4 Colon Colon - Transverse 0001157 259 850 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989198 170292 0.972928 0.991675 0.818915 22273 1 76 0.00216469 145 0 5.80334e+07 0.0247573 632428 5.85206e+07 2.15994e+06 22291 2.88135e+07 0 0.154013 0.991675 0.812097 5.80334e+07 0.0029501 1.29138e+07 7.01606e+06 1.30861e+07 159 1.30731e+07 8.83312e+06 0.00255642 1.30628e+07 49.9803 0.0108069 0.994152 0 50.3314 GTEX-WHSB-1026-SM-4M1XN 1 B1 6 ~7x3mm pieces; mainly mucosa, rare lymphoid aggregates present, rep ones encircled 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 260 850 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989525 216517 0.972264 0.991768 0.817266 23310 1 76 0.00210615 146 0 6.41243e+07 0.0264131 425256 6.46565e+07 2.30937e+06 23329 3.18682e+07 0 0.154998 0.991768 0.810538 6.41243e+07 0.00287015 1.42299e+07 6.73082e+06 1.44139e+07 166 1.4398e+07 1.06248e+07 0.00248729 1.4384e+07 49.9756 0.00657715 0.99401 0 50.3212 GTEX-WHSB-1226-SM-4M1XR 1 B1 6 pieces ~7x2mmm. Mucosa well-preserved, 20-50% of thickness 6.8 Stomach Stomach 0000945 275 841 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.988882 230596 0.977735 0.991034 0.831993 23648 1 76 0.00177127 322 0 1.04464e+08 0.0220404 817565 1.05409e+08 3.65097e+06 23671 5.20152e+07 0 0.145742 0.991034 0.824533 1.04464e+08 0.00249895 2.36656e+07 4.49495e+07 2.38823e+07 323 2.38613e+07 2.0465e+07 0.00213432 2.39056e+07 50.0464 0.00775611 0.993185 0 50.2279 GTEX-WHSB-1326-SM-3LK6W 0 B1 6 ~9x3mm pieces, squmaous epithelium is ~1-2% thickness 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 285 863 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.982088 465999 0.960043 0.982791 0.80899 22444 1 76 0.00228341 230 0 8.4363e+07 0.0397712 572758 8.58402e+07 7.83067e+06 22466 4.19538e+07 0 0.151054 0.982791 0.795068 8.4363e+07 0.00341393 1.82245e+07 1.96026e+07 1.84015e+07 229 1.83875e+07 1.4076e+07 0.00284826 1.83061e+07 49.8891 0.00667238 0.983494 0 50.2416 GTEX-WHSB-1626-SM-3LK6J 1 B1 2 pieces ~9x7mm 6.9 Thyroid Thyroid 0002046 290 860 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.973126 330375 0.960345 0.974031 0.737599 25254 1 76 0.00242593 206 0 9.83311e+07 0.0390899 362264 1.00953e+08 9.42675e+06 25310 4.88581e+07 0 0.222747 0.974031 0.718444 9.83311e+07 0.00355581 2.13834e+07 1.29766e+07 2.1509e+07 239 2.15477e+07 1.56869e+07 0.00299035 2.14295e+07 49.8624 0.00358845 0.974936 0 50.1464 GTEX-WHSB-1826-SM-3TW8M 0 B1 2 pieces ~9x7mm, minimal interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 299 856 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992244 308061 0.980041 0.993782 0.875691 21207 1 76 0.00224473 292 0 1.3763e+08 0.0197442 982986 1.38491e+08 1.90206e+07 21220 6.86118e+07 0 0.10435 0.993782 0.870246 1.3763e+08 0.00372703 2.99203e+07 2.28594e+07 3.03186e+07 314 3.02627e+07 2.59987e+07 0.00298474 3.01698e+07 49.9232 0.00709782 0.995319 0 50.3306 GTEX-WHSB-1926-SM-EXOHH 1 B1 2 pieces 12x8mm 5.5 Breast Breast - Mammary Tissue 0008367 303 855 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.968933 179635 0.972454 0.970978 0.785366 22939 1 76 0.00197672 164 0 7.4589e+07 0.0272973 792575 7.68185e+07 4.36161e+06 22968 3.71002e+07 0 0.187088 0.970978 0.762573 7.4589e+07 0.00356949 1.63997e+07 6.59499e+06 1.66269e+07 198 1.65349e+07 1.00155e+07 0.00277143 1.66343e+07 50.1499 0.0103175 0.973022 0 50.3439 GTEX-WHSB-2026-SM-3LK6H 0 B1 2 pieces ~3.5mm d. delineated ~ 0.5mm discontinuous fat layer 6.2 Nerve Nerve - Tibial 0001323 318 842 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.953075 249300 0.964751 0.953936 0.776157 24883 1 76 0.00227353 293 0 9.80444e+07 0.0349736 407949 1.02779e+08 9.42152e+06 24929 4.87489e+07 0 0.188594 0.953936 0.740404 9.80444e+07 0.00348404 2.14974e+07 1.07093e+07 2.16666e+07 317 2.16371e+07 1.50655e+07 0.00287824 2.16148e+07 49.9743 0.00396919 0.954796 0 50.1961 GTEX-WHSB-2126-SM-4M1XF 0 B1 2 pieces ~10x7mm, spermatogenesis present 7 Testis Testis 0000473 320 842 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633,LCSET-4056 09/09/2013 TruSeq.v1 RNASEQ 0.990089 432798 0.931151 0.992355 0.725932 32573 1 76 0.00172997 163 0 7.46899e+07 0.0685578 1.00034e+06 7.52654e+07 3.04281e+06 32621 3.71527e+07 0 0.20522 0.992355 0.720382 7.46899e+07 0.00270202 1.55972e+07 9.16688e+06 1.57943e+07 170 1.58553e+07 1.21278e+07 0.00221488 1.56937e+07 49.7439 0.0132909 0.994621 0 50.3139 GTEX-WHSB-2326-SM-4M1XK 0 B1 3 pieces ~1.5. Glands and ductules noted (representative ducts delineated) 8.8 Salivary Gland Minor Salivary Gland 0006330 320 843 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.990447 203987 0.969795 0.992855 0.768517 23266 1 76 0.00197923 133 0 5.35572e+07 0.0294296 155767 5.39426e+07 1.84294e+06 23290 2.66296e+07 0 0.201278 0.992855 0.763025 5.35572e+07 0.00277166 1.19649e+07 7.37269e+06 1.20496e+07 136 1.20813e+07 8.67417e+06 0.00237448 1.20612e+07 49.9585 0.00288764 0.995263 0 50.1763 GTEX-WHSE-0006-SM-3NMBW C1 8.1 Blood Whole Blood 0013756 341 BP-26980 RNA isolation_PAXgene Blood RNA (Manual) 07/05/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.96793 738042 0.972219 0.970253 0.798776 19072 1 76 0.0031625 137 0 1.06867e+08 0.0265467 321812 1.10143e+08 1.36854e+07 19081 5.31543e+07 0 0.173443 0.970253 0.775015 1.06867e+08 0.00496062 2.4618e+07 1.70558e+08 2.50488e+07 165 2.50235e+07 2.7985e+07 0.00405941 2.49024e+07 49.8788 0.00292176 0.972576 0 50.4338 GTEX-WHSE-0008-SM-4M1ZO C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 470 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.99134 408445 0.971533 0.993815 0.827989 20471 1 76 0.00161899 169 0 6.45313e+07 0.0280895 153234 6.49329e+07 2.22e+06 20482 3.21119e+07 0 0.143543 0.993815 0.822868 6.45313e+07 0.0023424 1.43396e+07 6.8944e+06 1.44348e+07 153 1.4529e+07 1.32735e+07 0.00197979 1.43996e+07 49.7764 0.00235988 0.99629 0 50.1654 GTEX-WHSE-0011-R10A-SM-EYYVG C1, A1 5.6 Brain Brain - Frontal Cortex (BA9) 0009834 452 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98857 254252 0.969672 0.990916 0.859961 23536 1 76 0.0020313 269 0 8.68116e+07 0.0296887 4.3371e+06 8.76074e+07 3.06005e+06 23555 4.32082e+07 0 0.109711 0.990916 0.852149 8.68116e+07 0.00285944 1.91532e+07 1.31644e+07 1.92938e+07 288 1.92525e+07 1.0464e+07 0.00244439 1.93438e+07 50.1183 0.0495061 0.993262 0 50.1829 GTEX-WHSE-0011-R10a-SM-AHZO3 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 452 ChIP-Seq GTEX-WHSE-0011-R11A-SM-3P5YY C1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 452 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950027 666953 0.946143 0.97161 0.745803 25402 1 76 0.00338389 274 0 1.14034e+08 0.0534129 2.54936e+06 1.17366e+08 1.54773e+07 25448 5.55858e+07 0 0.20034 0.97161 0.72463 1.14034e+08 0.00465955 2.4174e+07 2.73674e+07 2.42241e+07 311 2.52573e+07 1.37413e+07 0.00400755 2.5333e+07 50.0748 0.0217215 0.993193 0 50.0518 GTEX-WHSE-0011-R1A-SM-3P5ZK C1, A1 6.9 Brain Brain - Hippocampus 0001954 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952251 681526 0.960463 0.973793 0.833501 25212 1 76 0.00312637 276 0 1.2255e+08 0.0390478 4.56716e+06 1.25848e+08 1.64454e+07 25239 5.97912e+07 0 0.126962 0.973793 0.811657 1.2255e+08 0.00447917 2.63737e+07 2.78687e+07 2.65544e+07 320 2.76515e+07 1.58751e+07 0.00378781 2.76637e+07 50.0111 0.0362912 0.995335 0 50.1707 GTEX-WHSE-0011-R2A-SM-3P5ZL C1, A1 7.4 Brain Brain - Substantia nigra 0002038 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951995 489188 0.963601 0.973717 0.822178 25190 1 76 0.00310606 283 0 9.93746e+07 0.0359939 4.32545e+06 1.02057e+08 1.33945e+07 25219 4.84762e+07 0 0.141423 0.973717 0.800569 9.93746e+07 0.00447168 2.16001e+07 1.92176e+07 2.17393e+07 309 2.26312e+07 1.38699e+07 0.00377364 2.26873e+07 50.0618 0.0423827 0.995439 0 50.1607 GTEX-WHSE-0011-R3A-SM-3P5ZM C1, A1 6.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952544 589407 0.964282 0.974191 0.846221 24335 1 76 0.00311267 269 0 1.01999e+08 0.0351666 5.22171e+06 1.04702e+08 1.37347e+07 24359 4.97589e+07 0 0.118061 0.974191 0.824381 1.01999e+08 0.00453458 2.19738e+07 2.48212e+07 2.21344e+07 321 2.30709e+07 1.26378e+07 0.00380783 2.30196e+07 49.9444 0.0498723 0.995838 0 50.1821 GTEX-WHSE-0011-R4A-SM-3P5ZN C1, A1 7.1 Brain Brain - Amygdala 0001876 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951254 535284 0.964139 0.973236 0.822656 25298 1 76 0.0031338 284 0 1.04211e+08 0.0353974 3.95149e+06 1.07077e+08 1.46396e+07 25332 5.08157e+07 0 0.141483 0.973236 0.800639 1.04211e+08 0.00463217 2.24812e+07 1.87244e+07 2.27844e+07 317 2.3692e+07 1.51727e+07 0.00386606 2.3662e+07 49.9684 0.0369033 0.995219 0 50.3349 GTEX-WHSE-0011-R5A-SM-3P5ZO C1, A1 8.8 Brain Brain - Caudate (basal ganglia) 0001873 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 EXCLUDE 0.951736 745267 0.957414 0.973308 0.800387 25625 1 76 0.00315608 271 0 1.05658e+08 0.0420723 3.40239e+06 1.08556e+08 1.42076e+07 25660 5.15355e+07 0 0.157027 0.973308 0.779023 1.05658e+08 0.00442659 2.26849e+07 2.68575e+07 2.26756e+07 306 2.36337e+07 1.3762e+07 0.00377725 2.37722e+07 50.146 0.0313423 0.994879 0 49.9898 GTEX-WHSE-0011-R6A-SM-3P5ZP C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 452 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951683 758479 0.962508 0.973681 0.832923 24811 1 76 0.00312376 272 0 1.05882e+08 0.0369181 4.86480e+06 1.08744e+08 1.48125e+07 24837 5.16152e+07 0 0.129585 0.973681 0.811001 1.05882e+08 0.0046046 2.26795e+07 2.6225e+07 2.29368e+07 324 2.38792e+07 1.44338e+07 0.00384745 2.38198e+07 49.9377 0.0447364 0.995679 0 50.282 GTEX-WHSE-0011-R7A-SM-3P5YZ C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 452 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951782 569934 0.96163 0.973509 0.829153 24194 1 76 0.00309821 272 0 1.06793e+08 0.0380042 6.39826e+06 1.09699e+08 1.39737e+07 24212 5.20962e+07 0 0.132477 0.973509 0.807188 1.06793e+08 0.00446605 2.28693e+07 3.33498e+07 2.28822e+07 322 2.37712e+07 1.15113e+07 0.00376687 2.40363e+07 50.2773 0.0583257 0.995237 0 50.0141 GTEX-WHSE-0011-R8A-SM-3P5Z1 C1, A1 6.8 Brain Brain - Hypothalamus 0001898 452 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951675 740151 0.957131 0.973253 0.826265 25369 1 76 0.00309537 283 0 1.09227e+08 0.042517 3.85804e+06 1.12228e+08 1.42818e+07 25401 5.32897e+07 0 0.130867 0.973253 0.804164 1.09227e+08 0.00441888 2.34919e+07 2.56289e+07 2.37352e+07 320 2.46716e+07 1.5134e+07 0.00374245 2.47031e+07 50.0319 0.0343767 0.99483 0 50.2576 GTEX-WHSE-0126-SM-3NMBT 0 C1 6 pieces ~6x3mm. Squamous epithleium is ~2-3% of thickness 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 468 1125 BP-27620 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.97129 329078 0.977309 0.973735 0.787785 23468 1 76 0.00303166 219 0 9.75828e+07 0.0224533 627859 1.00215e+08 1.2641e+07 23496 4.85348e+07 0 0.189524 0.973735 0.767094 9.75828e+07 0.00457468 2.18491e+07 1.33426e+07 2.18628e+07 243 2.19298e+07 1.66844e+07 0.00380123 2.20195e+07 50.102 0.00626513 0.97618 0 50.0157 GTEX-WHSE-0426-SM-4M1XO 0 C1 2 pieces ~7x6mm. Spermatogenesis present but appears reduced for young age of patient 5.9 Testis Testis 0000473 478 1117 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.989437 292419 0.932901 0.991947 0.720042 31605 1 76 0.00184374 138 0 6.54158e+07 0.0667915 544035 6.59468e+07 2.2547e+06 31657 3.25441e+07 0 0.212859 0.991947 0.714244 6.54158e+07 0.00262838 1.36063e+07 9.45398e+06 1.37348e+07 145 1.37837e+07 1.0307e+07 0.00223507 1.37071e+07 49.8607 0.0082496 0.994458 0 50.235 GTEX-WHSE-0526-SM-4SOJ6 0 C1 2 pieces ~7x6mm, no interstitial fat 8.3 Muscle Muscle - Skeletal 0011907 489 1108 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 EXCLUDE 0.992899 563853 0.980435 0.994667 0.854425 20180 1 76 0.00195246 192 0 8.61907e+07 0.0193133 1.0823e+06 8.66528e+07 4.45437e+06 20195 4.29199e+07 0 0.12601 0.994667 0.849868 8.61907e+07 0.00239182 1.87566e+07 1.13333e+07 1.87978e+07 205 1.88559e+07 1.7501e+07 0.00217175 1.88476e+07 49.9889 0.0124901 0.996435 0 50.0549 GTEX-WHSE-0526-SM-5GZZD 0 C1 2 pieces ~7x6mm, no interstitial fat 8.3 Muscle Muscle - Skeletal 0011907 489 1108 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-4804 03/05/2014 TruSeq.v1 RNASEQ 0.992557 427204 0.980633 0.994458 0.84864 20570 1 76 0.00196897 268 0 9.0413e+07 0.019123 1.18768e+06 9.09169e+07 1.06549e+07 20582 4.502e+07 0 0.131993 0.994458 0.843938 9.0413e+07 0.00285795 1.96889e+07 1.40091e+07 1.95596e+07 259 1.96262e+07 1.851e+07 0.00241261 1.97861e+07 50.2029 0.0130633 0.99636 0 49.8354 GTEX-WHSE-0526-SM-5HL79 0 C1 2 pieces ~7x6mm, no interstitial fat 8.3 Muscle Muscle - Skeletal 0011907 489 1108 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-4806 03/02/2014 TruSeq.v1 EXCLUDE 0.99311 369361 0.981521 0.994774 0.853437 20089 1 76 0.001859 198 0 8.3615e+07 0.0182429 1.11407e+06 8.40543e+07 8.51602e+06 20102 4.16585e+07 0 0.128084 0.994774 0.848976 8.3615e+07 0.00270963 1.81925e+07 1.18909e+07 1.83003e+07 236 1.82879e+07 1.65553e+07 0.0022836 1.83317e+07 50.0598 0.0132541 0.996438 0 50.1477 GTEX-WHSE-0626-SM-4RGNF 2 C1 2 pieces ~6x6mm 7.8 Thyroid Thyroid 0002046 504 1094 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991004 693901 0.971547 0.99328 0.76528 22763 1 76 0.00223261 151 0 7.89964e+07 0.0281384 274823 7.95308e+07 7.05167e+06 22792 3.92908e+07 0 0.206266 0.99328 0.760138 7.89964e+07 0.00287896 1.74522e+07 1.01899e+07 1.75137e+07 174 1.75615e+07 1.31844e+07 0.00255504 1.75897e+07 50.0401 0.00345555 0.995557 0 50.0879 GTEX-WHSE-0726-SM-4RTXA 1 C1 2 pieces ~1.5mm. Both with large adherent aggregates of fat ~1.5-2mm d. 7.7 Blood Vessel Artery - Coronary 0001621 522 1076 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3905 09/11/2013 TruSeq.v1 RNASEQ 0.991845 401519 0.97824 0.993602 0.76588 20395 1 76 0.00233995 117 0 5.34466e+07 0.0214791 356298 5.37908e+07 2.75578e+06 20411 2.65803e+07 0 0.21236 0.993602 0.76098 5.34466e+07 0.00321451 1.18209e+07 5.39569e+06 1.19125e+07 128 1.19122e+07 8.73515e+06 0.00277646 1.19194e+07 50.0151 0.00662378 0.995359 0 50.193 GTEX-WHSE-0826-SM-4SOJU 1 C1 2 pieces ~7x6mm 8.1 Heart Heart - Atrial Appendage 0006631 524 1075 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989734 561281 0.979394 0.992861 0.83383 20130 1 76 0.00211418 183 0 7.2731e+07 0.0203911 2.1841e+06 7.3254e+07 3.89835e+06 20142 3.61411e+07 0 0.145564 0.992861 0.827877 7.2731e+07 0.00274369 1.60074e+07 1.49243e+07 1.61204e+07 208 1.62164e+07 1.00394e+07 0.00242794 1.61221e+07 49.8541 0.0298154 0.995988 0 50.1759 GTEX-WHSE-0926-SM-3NMBS 1 C1 2 pieces ~7x6mm. No ischemic chenages noted 7.3 Heart Heart - Left Ventricle 0006566 554 1046 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992228 278827 0.982277 0.994369 0.850303 20396 1 76 0.00267175 265 0 9.49618e+07 0.0175012 3.07560e+06 9.54995e+07 1.13442e+07 20409 4.72749e+07 0 0.131974 0.994369 0.845515 9.49618e+07 0.00403662 2.13332e+07 1.18551e+07 2.124e+07 328 2.13101e+07 1.49187e+07 0.00335272 2.14556e+07 50.1702 0.0322055 0.996511 0 49.8906 GTEX-WHSE-0926-SM-CYKVI-ELUATE 1 C1 2 pieces ~7x6mm. No ischemic chenages noted 7.3 Heart Heart - Left Ventricle 0006566 554 1046 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 RIP-Seq GTEX-WHSE-0926-SM-CYKVI-INPUT 1 C1 2 pieces ~7x6mm. No ischemic chenages noted 7.3 Heart Heart - Left Ventricle 0006566 554 1046 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 RIP-Seq GTEX-WHSE-0926-SM-CYKVI-SUP 1 C1 2 pieces ~7x6mm. No ischemic chenages noted 7.3 Heart Heart - Left Ventricle 0006566 554 1046 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 RIP-Seq GTEX-WHSE-1026-SM-57WAX 0 C1 2 pieces ~3.5mm d. Good clean specimens 6.5 Nerve Nerve - Tibial 0001323 556 1044 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990395 317899 0.975188 0.993216 0.813635 22999 1 76 0.00183273 214 0 8.49585e+07 0.0245455 536994 8.55388e+07 1.06749e+07 23024 4.22508e+07 0 0.161553 0.993216 0.808115 8.49585e+07 0.00367995 1.86349e+07 7.84514e+06 1.8846e+07 225 1.8827e+07 1.39678e+07 0.00275371 1.88835e+07 50.0749 0.00627778 0.996037 0 50.2816 GTEX-WHSE-1126-SM-3NMBU 0 C1 2 pieces ~2.5mm d. Good clean specimens; one has adherent nubbin of additiona vessel ~0.5mm d. 6.8 Blood Vessel Artery - Tibial 0007610 556 1045 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991206 473825 0.97517 0.993352 0.830554 21766 1 76 0.00281442 278 0 1.0825e+08 0.0244389 462001 1.08975e+08 1.26531e+07 21795 5.38624e+07 0 0.144615 0.993352 0.825033 1.0825e+08 0.00418921 2.32611e+07 1.03427e+07 2.33217e+07 326 2.33562e+07 2.01611e+07 0.00350033 2.34475e+07 50.0976 0.00423953 0.995499 0 50.0651 GTEX-WHSE-1426-SM-4M1XG 1 C1 6 pieces ~7x2mm, all muscularis 6.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 600 1003 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.987839 164733 0.970986 0.990257 0.750768 21728 1 76 0.00201503 138 0 6.68369e+07 0.0288129 487057 6.74945e+07 2.32045e+06 21753 3.32349e+07 0 0.220217 0.990257 0.743454 6.68369e+07 0.00276888 1.45381e+07 4.92615e+06 1.47023e+07 161 1.46932e+07 9.24849e+06 0.00239104 1.4707e+07 50.0236 0.00721625 0.992676 0 50.2808 GTEX-WHSE-1526-SM-4M1XH 1 C1 6 pieces ~5x2mm, ~15-20 squamous mucosa 8.7 Esophagus Esophagus - Mucosa 0006920 602 1002 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.988272 190857 0.978265 0.990881 0.789242 20889 1 76 0.00197083 131 0 6.11191e+07 0.0214714 273424 6.16816e+07 2.21774e+06 20902 3.03998e+07 0 0.189024 0.990881 0.782044 6.11191e+07 0.00278896 1.37554e+07 7.13347e+06 1.39222e+07 151 1.39625e+07 1.05772e+07 0.00237882 1.38764e+07 49.8454 0.00443283 0.99349 0 50.3012 GTEX-WHSE-1626-SM-4M1XL 1 C1 6 pieces ~7x2.5mm, all muscularis 6.9 Esophagus Esophagus - Muscularis 0004648 604 1001 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.987301 132468 0.974025 0.989759 0.778327 21213 1 76 0.0018489 132 0 6.00258e+07 0.0257548 615456 6.06469e+07 2.06847e+06 21236 2.98441e+07 0 0.195698 0.989759 0.770356 6.00258e+07 0.00264349 1.29909e+07 4.4277e+06 1.31851e+07 156 1.31839e+07 8.62763e+06 0.00224521 1.31343e+07 49.9056 0.0101482 0.992217 0 50.371 GTEX-WHSE-1726-SM-3PYKB 1 C1 2 pieces ~7x6mm, both with ~20% vessel/bronchus, delineated. Prominent parenchymal hemorrhage in both, probably trauma-related Lung Lung 0008952 606 1000 BP-27627 DNA Isolation from Tissue via QIAgen Spin Column 07/19/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R02C01 GTEX-WHSE-1726-SM-3PZ7X 1 C1 2 pieces ~7x6mm, both with ~20% vessel/bronchus, delineated. Prominent parenchymal hemorrhage in both, probably trauma-related Lung Lung 0008952 606 1000 BP-27627 DNA Isolation from Tissue via QIAgen Spin Column 07/19/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340002_R02C01 GTEX-WHSE-1726-SM-4X61H 1 C1 2 pieces ~7x6mm, both with ~20% vessel/bronchus, delineated. Prominent parenchymal hemorrhage in both, probably trauma-related Lung Lung 0008952 606 1000 BP-27627 DNA Isolation from Tissue via QIAgen Spin Column 07/19/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WHSE-1726-SM-7DRPJ 1 C1 2 pieces ~7x6mm, both with ~20% vessel/bronchus, delineated. Prominent parenchymal hemorrhage in both, probably trauma-related Lung Lung 0008952 606 1000 BP-27627 DNA Isolation from Tissue via QIAgen Spin Column 07/19/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-WHSE-1726-SM-CLTG4 1 C1 2 pieces ~7x6mm, both with ~20% vessel/bronchus, delineated. Prominent parenchymal hemorrhage in both, probably trauma-related Lung Lung 0008952 606 1000 BP-27627 DNA Isolation from Tissue via QIAgen Spin Column 07/19/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WHSE-2726-SM-EZ6ML 3 C1 6 pieces ~8x1.5mm. 80% muscularis propria. Badly autolyzed 5.8 Colon Colon - Sigmoid 0001159 635 983 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.983001 224113 0.976296 0.984742 0.812556 23575 1 76 0.00251211 273 0 8.94463e+07 0.0233163 1.66739e+06 9.08322e+07 6.99328e+06 23605 4.45398e+07 0 0.16374 0.984742 0.800158 8.94463e+07 0.00396599 1.96641e+07 7.66428e+06 1.97912e+07 271 1.97739e+07 1.31362e+07 0.00323776 1.98322e+07 50.0735 0.0183568 0.986483 0 50.1611 GTEX-WHSE-2926-SM-3NMBG 1 C1 4 pieces ~6x4mm. Purkinjes show minimal hypoxic damage 6.7 Brain Brain - Cerebellum 0002037 644 975 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989448 800773 0.934834 0.99174 0.724147 25465 1 76 0.00315062 270 0 1.04285e+08 0.0648018 1.39667e+06 1.05154e+08 1.26458e+07 25509 5.18375e+07 0 0.210686 0.99174 0.718166 1.04285e+08 0.00453895 2.23171e+07 2.85984e+07 2.23259e+07 312 2.23833e+07 1.24675e+07 0.00384318 2.24936e+07 50.1229 0.0132822 0.994031 0 50.0099 GTEX-WHSE-3026-SM-3P5ZH 1 C1 4 pieces ~5x4 mm 6.7 Brain Brain - Cortex 0001870 647 973 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952555 427106 0.966594 0.974254 0.839146 24355 1 76 0.00308444 270 0 9.49933e+07 0.032837 2.57086e+06 9.75037e+07 1.24492e+07 24376 4.63269e+07 0 0.127448 0.974254 0.817541 9.49933e+07 0.0044859 2.05578e+07 1.5494e+07 2.06674e+07 313 2.15169e+07 1.36587e+07 0.00376956 2.15743e+07 50.0666 0.0263668 0.995953 0 50.1329 GTEX-WHSE-3026-SM-CYKVL 1 C1 4 pieces ~5x4 mm 6.7 Brain Brain - Cortex 0001870 647 973 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 RIP-Seq GTEX-WHSE-3126-SM-3P5ZI 1 C1 1 piece ~7x4mm. Adenohypophysis only 7.4 Pituitary Pituitary 0000007 648 972 BP-27757 RNA isolation_PAXgene Tissue miRNA 07/23/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949944 771302 0.958334 0.971845 0.785857 24464 1 76 0.00320102 204 0 9.55625e+07 0.0414027 341423 9.83311e+07 1.34327e+07 24495 4.66006e+07 0 0.172476 0.971845 0.763731 9.55625e+07 0.00459116 1.98202e+07 2.33684e+07 1.99731e+07 241 2.08811e+07 1.62372e+07 0.00388043 2.07752e+07 49.8729 0.00347218 0.993745 0 50.192 GTEX-WHWD-0002-SM-3G3SY B1 Blood Whole Blood 0013756 -42 BP-26974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2012 GTExBatch8_36_Om5_Jul12 09/05/2012 Illumina OMNI SNP Array OMNI 8222003046_R04C01 GTEX-WHWD-0002-SM-3G3TZ B1 Blood Whole Blood 0013756 -42 BP-26974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2012 GTExBatch8_Exome_Jul12 08/23/2012 Illumina Human Exome SNP Array EXCLUDE 8134880104_R02C02 GTEX-WHWD-0002-SM-4X61F B1 Blood Whole Blood 0013756 -42 BP-26974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WHWD-0002-SM-5SOEC B1 Blood Whole Blood 0013756 -42 BP-26974 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/05/2012 LCSET-5226,LCSET-5431 05/25/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WHWD-0003-SM-4M1ZS B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -42 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3633 08/24/2013 TruSeq.v1 RNASEQ 0.991134 401032 0.969939 0.993148 0.809689 19687 1 76 0.00183848 132 0 5.32464e+07 0.0295877 292294 5.36138e+07 1.80480e+06 19702 2.65017e+07 0 0.160249 0.993148 0.804141 5.32464e+07 0.00249625 1.18418e+07 5.75366e+06 1.19679e+07 130 1.20107e+07 1.22018e+07 0.0021667 1.19094e+07 49.7883 0.00545185 0.995161 0 50.2649 GTEX-WHWD-0005-SM-3LK7D B1 8.7 Blood Whole Blood 0013756 -42 BP-26980 RNA isolation_PAXgene Blood RNA (Manual) 07/05/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.981064 1.40158e+06 0.936188 0.982194 0.780187 19809 1 76 0.00238507 159 0 9.65654e+07 0.0634757 302230 9.83161e+07 8.74958e+06 19825 4.80269e+07 0 0.156001 0.982194 0.766294 9.65654e+07 0.00364472 2.07256e+07 8.27739e+07 2.10454e+07 191 2.11043e+07 2.00858e+07 0.00301417 2.0816e+07 49.6562 0.00307406 0.983324 0 50.3828 GTEX-WHWD-0008-SM-4OOSU B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 327 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.991981 560252 0.977942 0.993143 0.851071 20889 1 76 0.00192045 187 0 8.36592e+07 0.0217044 351018 8.42368e+07 2.56343e+06 20912 4.16448e+07 0 0.126871 0.993143 0.845235 8.36592e+07 0.00235245 1.87865e+07 9.22195e+06 1.88737e+07 181 1.89675e+07 2.07291e+07 0.0021362 1.87978e+07 49.7753 0.00416704 0.994305 0 50.1158 GTEX-WHWD-0126-SM-4OORS 1 B1 2 pieces, 7x6.5 & 8x7mm; balanced red and white pulp 7.5 Spleen Spleen 0002106 220 798 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.989769 470778 0.962845 0.9908 0.748482 24892 1 76 0.00249372 209 0 9.59756e+07 0.0366557 369167 9.68667e+07 2.77021e+06 24934 4.77452e+07 0 0.214363 0.9908 0.741596 9.59756e+07 0.00289661 2.10917e+07 1.21602e+07 2.12203e+07 220 2.13082e+07 1.55973e+07 0.00269496 2.11086e+07 49.7647 0.00381108 0.991832 0 50.152 GTEX-WHWD-0226-SM-4OORT 1 B1 2 pieces, 3x2 & 5x3mm; 50% atheromatous plaques; 10-20% peripheral fibroadipose 6.9 Blood Vessel Artery - Coronary 0001621 228 791 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.990879 363640 0.972584 0.992098 0.821679 22107 1 76 0.00220389 170 0 8.2603e+07 0.027087 370603 8.3261e+07 2.44022e+06 22121 4.1093e+07 0 0.150906 0.992098 0.815186 8.2603e+07 0.00257749 1.76881e+07 5.62511e+06 1.78602e+07 197 1.78638e+07 1.55194e+07 0.00239046 1.77849e+07 49.8893 0.0044511 0.993317 0 50.242 GTEX-WHWD-0326-SM-3LK6L 1 B1 2 pieces, 7x6.5 & 7x6mm; 25 & 60% pericardial stroma, may be due to oblique sectioning 8 Heart Heart - Atrial Appendage 0006631 233 786 BP-27512 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.981567 350060 0.971602 0.982255 0.835329 23002 1 76 0.00197027 270 0 1.04039e+08 0.0280972 2.02838e+06 1.05919e+08 8.50746e+06 23027 5.18046e+07 0 0.136273 0.982255 0.820506 1.04039e+08 0.00308559 2.23821e+07 1.39557e+07 2.26307e+07 319 2.25733e+07 1.81331e+07 0.00252754 2.25023e+07 49.9212 0.0191503 0.982942 0 50.2761 GTEX-WHWD-0426-SM-3LK83 1 B1 2 pieces, 7x6 & 6x5.5mm; <5% internal adipose 8.4 Heart Heart - Left Ventricle 0006566 239 781 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.986665 455039 0.979417 0.987428 0.864385 21815 1 76 0.00192655 372 0 1.16579e+08 0.0202538 2.63643e+06 1.18063e+08 9.14501e+06 21834 5.80205e+07 0 0.115032 0.987428 0.853518 1.16579e+08 0.00297908 2.56214e+07 1.67623e+07 2.59589e+07 334 2.5827e+07 2.12721e+07 0.00245241 2.58234e+07 49.9965 0.0223307 0.988192 0 50.3272 GTEX-WHWD-0526-SM-4OORW 1 B1 6 pieces, up to 7x1mm; no lesions 7.2 Blood Vessel Artery - Aorta 0001496 242 779 BP-27514 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.992139 250283 0.974442 0.993644 0.831486 21222 1 76 0.00173653 128 0 5.60867e+07 0.025211 164740 5.64454e+07 2.2022e+06 21237 2.79125e+07 0 0.142956 0.993644 0.826201 5.60867e+07 0.00256277 1.20975e+07 4.37672e+06 1.21988e+07 138 1.21763e+07 1.07227e+07 0.00214902 1.22081e+07 50.0651 0.00291857 0.995149 0 50.2084 GTEX-WHWD-0726-SM-4OORX 1 B1 2 pieces, 7x6 & 6x4mm; 1 with 30% peripheral adipose & vascular tissue 7.5 Pancreas Pancreas 0001150 252 770 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.990773 224472 0.974773 0.992284 0.83358 21199 1 76 0.00188267 115 0 5.45694e+07 0.0250319 188295 5.49938e+07 2.26726e+06 21211 2.71685e+07 0 0.141192 0.992284 0.827149 5.45694e+07 0.00272757 1.24325e+07 1.24329e+07 1.26279e+07 120 1.25937e+07 1.47565e+07 0.00230447 1.25549e+07 49.9229 0.00342393 0.993796 0 50.39 GTEX-WHWD-0826-SM-3LK6R 1 B1 3 pieces, up to 7x7mm; lobulated structure; 1 with 10% neurovascular elements 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 256 767 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.947675 234886 0.974899 0.948328 0.824274 23654 1 76 0.00211513 277 0 9.59515e+07 0.0248029 717532 1.0118e+08 9.25788e+06 23675 4.77055e+07 0 0.150624 0.948328 0.781682 9.59515e+07 0.00329937 2.11131e+07 1.00221e+07 2.14009e+07 296 2.13562e+07 1.72054e+07 0.00270684 2.12216e+07 49.8419 0.00709166 0.948981 0 50.3384 GTEX-WHWD-0926-SM-4OORY 1 B1 4 pieces, up to 5mm x 865um & 3.6x1.1 mm; 8.4 Esophagus Esophagus - Mucosa 0006920 272 751 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.991568 325514 0.976963 0.993522 0.828717 23268 1 76 0.00171329 166 0 7.90263e+07 0.0227658 277170 7.95415e+07 3.21492e+06 23284 3.93419e+07 0 0.148246 0.993522 0.823349 7.90263e+07 0.00262376 1.76668e+07 8.30824e+06 1.78564e+07 183 1.78788e+07 1.59296e+07 0.00216763 1.77957e+07 49.8836 0.0034846 0.995477 0 50.2668 GTEX-WHWD-1026-SM-4OORZ 1 B1 4 pieces, up to 6x3mm; 2 have 10-20% fibrous stroma 7.5 Esophagus Esophagus - Muscularis 0004648 274 750 BP-27516 RNA isolation_PAXgene Tissue miRNA 07/17/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.990863 398632 0.976524 0.991959 0.841936 23295 1 76 0.00214303 382 0 1.12002e+08 0.0231831 644479 1.1291e+08 3.33077e+06 23320 5.57378e+07 0 0.134588 0.991959 0.835167 1.12002e+08 0.0025279 2.44242e+07 8.95224e+06 2.47091e+07 345 2.47583e+07 2.06316e+07 0.00233525 2.44995e+07 49.7373 0.00570791 0.993056 0 50.2899 GTEX-WHWD-1226-SM-4OOS1 1 B1 6 pieces, up to 5.5x2mm; 1 of 6 has muscularis only, other 5 have full thickness 8.3 Colon Colon - Transverse 0001157 287 738 BP-27620 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.988402 184370 0.970955 0.989916 0.793884 22589 1 76 0.00240007 132 0 5.55861e+07 0.0272143 680051 5.61524e+07 2.29893e+06 22606 2.76273e+07 0 0.177071 0.989916 0.785878 5.55861e+07 0.00317181 1.23845e+07 6.58718e+06 1.2499e+07 136 1.25021e+07 8.65486e+06 0.00278535 1.24614e+07 49.9184 0.0121108 0.991429 0 50.23 GTEX-WHWD-1426-SM-4OORU 1 B1 4 pieces, up to 8x4mm; good oxyntic glands, but superficial glands sloughed 6.1 Stomach Stomach 0000945 299 728 BP-27620 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.986734 177445 0.978258 0.988942 0.825917 22046 1 76 0.0018058 230 0 5.2604e+07 0.0212388 1.12365e+06 5.31922e+07 2.06722e+06 22059 2.6145e+07 0 0.15234 0.988942 0.816785 5.2604e+07 0.00272128 1.19735e+07 3.89232e+07 1.21763e+07 160 1.21802e+07 1.14703e+07 0.00226252 1.20833e+07 49.8002 0.0211244 0.99115 0 50.4198 GTEX-WHWD-1526-SM-4OORV 1 B1 6 pieces, up to 6x3mm; 1 of 6 has pericolonic adipose; others have well trimmed muscularis 7.8 Colon Colon - Sigmoid 0001159 304 724 BP-27620 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.986947 403894 0.973951 0.98833 0.822647 23637 1 76 0.00225117 282 0 1.00003e+08 0.0257668 603164 1.01184e+08 3.45749e+06 23661 4.96759e+07 0 0.151304 0.98833 0.813047 1.00003e+08 0.00267722 2.17908e+07 8.01655e+06 2.18189e+07 310 2.19368e+07 1.738e+07 0.0024639 2.18128e+07 49.8583 0.00596109 0.989713 0 50.0323 GTEX-WHWD-1826-SM-3LK6I 1 B1 6 pieces, up to 9x3mm; subcutaneous fat is well trimmed 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 319 711 BP-27623 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.94643 226352 0.968273 0.94749 0.824235 22734 1 76 0.00226869 162 0 6.67023e+07 0.0315106 611394 7.03989e+07 6.63622e+06 22755 3.31706e+07 0 0.144038 0.94749 0.780954 6.67023e+07 0.00342055 1.46067e+07 9.80833e+06 1.4768e+07 159 1.47733e+07 1.20597e+07 0.00284398 1.46734e+07 49.8304 0.00868471 0.94855 0 50.2745 GTEX-WHWD-2326-SM-3LK6Q 1 B1 2 pieces, 7x2 & 4x3mm; 30% fibrous stroma in one 6.2 Nerve Nerve - Tibial 0001323 347 686 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.845911 179691 0.971912 0.84727 0.804967 23750 1 76 0.00216387 175 0 8.06241e+07 0.027706 350860 9.51575e+07 1.06919e+07 23777 3.99686e+07 0 0.166945 0.84727 0.682024 8.06241e+07 0.00379019 1.77045e+07 8.76966e+06 1.79543e+07 201 1.79138e+07 1.37695e+07 0.00297573 1.78862e+07 49.9614 0.00368715 0.848629 0 50.3502 GTEX-WHWD-2426-SM-3LK6S 1 B1 2 pieces, 3x2 & 2x2mm; no lesions 6.8 Blood Vessel Artery - Tibial 0007610 361 673 BP-27626 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.970834 235525 0.972737 0.971503 0.825722 22067 1 76 0.00227827 208 0 8.81037e+07 0.026878 460724 9.0688e+07 8.16305e+06 22091 4.37697e+07 0 0.147015 0.971503 0.802191 8.81037e+07 0.0034239 1.89954e+07 7.73145e+06 1.92137e+07 240 1.92357e+07 1.6037e+07 0.00285069 1.90359e+07 49.7389 0.00508032 0.972171 0 50.2857 GTEX-WI4N-0005-SM-3LK7E C1 9 Blood Whole Blood 0013756 578 BP-27115 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.874011 561168 0.964253 0.875135 0.815063 21227 1 76 0.00226086 129 0 7.06153e+07 0.0353436 400365 8.06907e+07 9.50022e+06 21238 3.5118e+07 0 0.149191 0.875135 0.71329 7.06153e+07 0.00364619 1.58038e+07 6.14691e+07 1.61181e+07 131 1.60809e+07 1.721e+07 0.00295264 1.59492e+07 49.7944 0.00496172 0.87626 0 50.4924 GTEX-WI4N-0008-SM-4OOSV C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 689 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.990984 654579 0.973964 0.992335 0.833281 22052 1 76 0.00209157 214 0 9.21905e+07 0.0256821 323231 9.29026e+07 2.7775e+06 22076 4.58469e+07 0 0.140683 0.992335 0.826894 9.21905e+07 0.00247656 2.04628e+07 1.10919e+07 2.05954e+07 205 2.07478e+07 2.11322e+07 0.0022838 2.04438e+07 49.631 0.00347925 0.993686 0 50.1614 GTEX-WI4N-0126-SM-EAZB1 0 C1 2 pieces ~2mm d. Good clean specimens, no atherosis. 5.5 Blood Vessel Artery - Tibial 0007610 590 937 BP-27938 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.983666 292479 0.976327 0.984604 0.803982 22147 1 76 0.00205316 196 0 8.72942e+07 0.0233554 398564 8.86592e+07 6.55998e+06 22176 4.34741e+07 0 0.172345 0.984604 0.791604 8.72942e+07 0.00331692 1.90623e+07 7.43532e+06 1.91638e+07 204 1.90657e+07 1.63195e+07 0.00268444 1.92496e+07 50.24 0.00449546 0.985542 0 50.1328 GTEX-WI4N-0626-SM-3TW8Z 1 C1 2 pieces ~6x4 mm. Focal ischemic changes (contration bands) 6.6 Heart Heart - Left Ventricle 0006566 617 914 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.990981 557096 0.969538 0.992522 0.810403 22663 1 76 0.00286854 268 0 1.19333e+08 0.0303087 4.93129e+06 1.20232e+08 1.64506e+07 22697 5.94727e+07 0 0.159135 0.992522 0.804343 1.19333e+08 0.00430387 2.61343e+07 3.25323e+07 2.65782e+07 301 2.66713e+07 1.29591e+07 0.0035851 2.62253e+07 49.5785 0.0410147 0.994062 0 50.4211 GTEX-WI4N-0726-SM-3TW93 1 C1 2 pieces ~6x4mm 7.7 Heart Heart - Atrial Appendage 0006631 624 908 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.991008 360328 0.970284 0.992633 0.754353 23586 1 76 0.00273672 269 0 1.02096e+08 0.029456 1.33353e+06 1.02854e+08 1.36733e+07 23627 5.08662e+07 0 0.215931 0.992633 0.748796 1.02096e+08 0.0041482 2.1873e+07 1.56702e+07 2.20089e+07 263 2.20502e+07 1.60877e+07 0.0034413 2.19855e+07 49.9265 0.0129653 0.994258 0 50.1549 GTEX-WI4N-0926-SM-3LK7K 1 C1 2 pieces ~7x7mm. Prominent Hashimoto's thyroiditis, diffuse, in both, with regressive/involutional changes 6.2 Thyroid Thyroid 0002046 641 893 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2234 12/16/2012 TruSeq.v1 EXCLUDE 0.963236 237591 0.96268 0.963971 0.72241 24360 1 76 0.00286746 127 0 6.83895e+07 0.0363915 320622 7.09456e+07 7.17597e+06 24395 3.39417e+07 0 0.24027 0.963971 0.696382 6.83895e+07 0.00389942 1.49777e+07 1.05889e+07 1.5086e+07 143 1.51208e+07 9.67264e+06 0.00338305 1.49969e+07 49.7944 0.00451927 0.964706 0 50.18 GTEX-WI4N-1026-SM-3LK7N 0 C1 6 pieces ~7x2mm; squamous epithelium is ~1-2% of thickness 7 Skin Skin - Sun Exposed (Lower leg) 0004264 688 846 BP-27941 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.941489 202098 0.975317 0.942376 0.809747 22266 1 76 0.00247964 198 0 7.64681e+07 0.0244565 699161 8.11439e+07 1.02943e+07 22291 3.80204e+07 0 0.16557 0.942376 0.763087 7.64681e+07 0.00372701 1.68554e+07 9.72325e+06 1.69928e+07 183 1.6986e+07 1.36183e+07 0.00310274 1.69342e+07 49.9236 0.00861631 0.943263 0 50.2029 GTEX-WI4N-1126-SM-3LK7Q 0 C1 2 pieces ~8x6mm 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 692 844 BP-27969 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.917585 292966 0.976449 0.917664 0.802916 23567 1 76 0.00242207 276 0 1.04946e+08 0.0232191 534367 1.14362e+08 1.06759e+07 23600 5.21269e+07 0 0.173534 0.917664 0.736806 1.04946e+08 0.0036055 2.29837e+07 1.12556e+07 2.3212e+07 326 2.31697e+07 1.83613e+07 0.00301373 2.30385e+07 49.8581 0.00467259 0.917742 0 50.247 GTEX-WI4N-1326-SM-3PYKI 1 C1 6 pieces ~7x3mm, all muscularis Esophagus Esophagus - Muscularis 0004648 719 820 BP-27970 DNA Isolation from Tissue via QIAgen Spin Column 07/25/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R04C01 GTEX-WI4N-1326-SM-3PZ7L 1 C1 6 pieces ~7x3mm, all muscularis Esophagus Esophagus - Muscularis 0004648 719 820 BP-27970 DNA Isolation from Tissue via QIAgen Spin Column 07/25/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340005_R04C01 GTEX-WI4N-1326-SM-4X5ZN 1 C1 6 pieces ~7x3mm, all muscularis Esophagus Esophagus - Muscularis 0004648 719 820 BP-27970 DNA Isolation from Tissue via QIAgen Spin Column 07/25/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WI4N-1326-SM-7DRPR 1 C1 6 pieces ~7x3mm, all muscularis Esophagus Esophagus - Muscularis 0004648 719 820 BP-27970 DNA Isolation from Tissue via QIAgen Spin Column 07/25/2012 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WI4N-1426-SM-3LK7H 1 C1 2pieces ~9x5mm. TDLUs evident, representative ones encircled 6.9 Breast Breast - Mammary Tissue 0008367 730 810 BP-27969 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.978616 293835 0.97269 0.979554 0.758252 24828 1 76 0.0026223 203 0 9.2652e+07 0.026806 336887 9.45859e+07 9.30428e+06 24878 4.59845e+07 0 0.214438 0.979554 0.742749 9.2652e+07 0.00379654 2.03693e+07 9.91407e+06 2.05672e+07 211 2.06174e+07 1.50491e+07 0.00320886 2.04089e+07 49.746 0.0035617 0.980493 0 50.2417 GTEX-WI4N-1526-SM-EZ6LG 1 C1 2 pieces ~9x7mm 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 737 803 BP-27969 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.985256 234982 0.977811 0.987016 0.818546 22730 1 76 0.00267353 273 0 8.79423e+07 0.0219722 1.08775e+06 8.90992e+07 7.18633e+06 22751 4.38044e+07 0 0.159265 0.987016 0.807918 8.79423e+07 0.00408967 1.93888e+07 8.9815e+06 1.96146e+07 257 1.95917e+07 1.34818e+07 0.00338034 1.95595e+07 49.9589 0.0122083 0.988776 0 50.2894 GTEX-WI4N-1826-SM-4OOSF 2 C1 2 pieces ~7x7mm. Moderate autolysis/aponification, Islets not well visualized 5.9 Pancreas Pancreas 0001150 746 797 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.980901 410234 0.967934 0.982234 0.776411 22767 1 76 0.00263615 177 0 9.35879e+07 0.0318466 372092 9.52806e+07 3.93188e+06 22797 4.64299e+07 0 0.191523 0.982234 0.762618 9.35879e+07 0.00312447 2.11093e+07 1.63038e+07 2.10921e+07 187 2.13889e+07 1.81104e+07 0.00287998 2.09644e+07 49.4989 0.00390522 0.983568 0 49.9796 GTEX-WI4N-2026-SM-4OOS7 2 C1 6 pieces 3 with some glomeruli, encircled, 3 largely medulla ~6x2mm 5.9 Kidney Kidney - Cortex 0001225 751 794 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 EXCLUDE 0.983463 162897 0.987682 0.98528 0.893496 17505 1 76 0.00305061 516 0 1.04079e+08 0.0122862 1.39631e+07 1.05634e+08 4.33684e+06 17507 5.16514e+07 0 0.0941867 0.98528 0.880344 1.04079e+08 0.00347487 2.29908e+07 3.25585e+07 2.37511e+07 441 2.31739e+07 2.83751e+06 0.00326235 2.36796e+07 50.5397 0.132185 0.987098 0 50.8133 GTEX-WI4N-2226-SM-4OOS9 2 C1 6 pieces ~ 7x1.5mm, virtually all muscularis, clean speimens, but autolyzed 6.3 Colon Colon - Sigmoid 0001159 769 778 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.983759 277370 0.974247 0.984765 0.821166 23823 1 76 0.00258732 280 0 1.02005e+08 0.0254837 683632 1.03583e+08 4.18804e+06 23855 5.05674e+07 0 0.15308 0.984765 0.808656 1.02005e+08 0.00307285 2.23214e+07 8.80031e+06 2.2351e+07 293 2.25425e+07 1.71957e+07 0.00282984 2.22452e+07 49.6681 0.00659986 0.98577 0 50.0331 GTEX-WI4N-2426-SM-4OOSC 2 C1 2 pieces ~8x7mm. No endometrium ;all muscularis; incidental ~2.5mm leiomyoma present, encircled, in one aliquot 6.7 Uterus Uterus 0000995 782 768 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.988164 254831 0.972538 0.990602 0.754565 21206 1 76 0.00201764 123 0 5.56214e+07 0.0272016 166667 5.61491e+07 2.30937e+06 21223 2.76422e+07 0 0.217973 0.990602 0.747474 5.56214e+07 0.00292211 1.21235e+07 4.93646e+06 1.22424e+07 129 1.22268e+07 8.92499e+06 0.00246876 1.22769e+07 50.1022 0.00296829 0.993039 0 50.244 GTEX-WI4N-2526-SM-4OOSE 1 C1 2 pieces ~8x6mm. Post menopausal atrophy, prominent corpora albicantia 7.6 Ovary Ovary 0000992 783 767 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.986719 437643 0.972703 0.987669 0.715694 23509 1 76 0.00262813 193 0 9.89955e+07 0.0270261 113454 1.00231e+08 3.47284e+06 23559 4.91276e+07 0 0.257009 0.987669 0.706869 9.89955e+07 0.0030576 2.19967e+07 9.82452e+06 2.19906e+07 204 2.21914e+07 1.64987e+07 0.00284266 2.19026e+07 49.6725 0.00113192 0.988619 0 49.9931 GTEX-WI4N-2726-SM-3LK7Y 0 C1 6 pieces ~7x2mm. Squamous epithelium is ~2-3.5% of thickness 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 790 761 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.946165 191979 0.975484 0.947215 0.769859 22515 1 76 0.00256128 164 0 7.29047e+07 0.0243145 907192 7.69674e+07 9.40868e+06 22544 3.62444e+07 0 0.205625 0.947215 0.729222 7.29047e+07 0.00383825 1.62247e+07 9.52892e+06 1.63795e+07 167 1.6361e+07 1.11516e+07 0.00319905 1.63217e+07 49.9399 0.0117867 0.948264 0 50.2374 GTEX-WK11-0002-SM-3PYKK C1 Blood Whole Blood 0013756 766 BP-27057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/06/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R02C02 GTEX-WK11-0002-SM-3PZ7M C1 Blood Whole Blood 0013756 766 BP-27057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/06/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8976358006_R04C01 GTEX-WK11-0002-SM-4X5ZT C1 Blood Whole Blood 0013756 766 BP-27057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/06/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WK11-0002-SM-5SOET C1 Blood Whole Blood 0013756 766 BP-27057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/06/2012 LCSET-5226,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-WK11-0002-SM-CLTGB C1 Blood Whole Blood 0013756 766 BP-27057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/06/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WK11-0006-SM-3NB3J C1 8.4 Blood Whole Blood 0013756 766 BP-27115 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.97618 621416 0.974907 0.980767 0.764506 22260 1 76 0.00450697 167 0 1.13645e+08 0.0244369 711887 1.15873e+08 2.11408e+07 22292 5.63422e+07 0 0.210402 0.980767 0.749801 1.13645e+08 0.00646533 2.56052e+07 8.20178e+07 2.59642e+07 199 2.61157e+07 2.25939e+07 0.00548157 2.59765e+07 49.8664 0.00614367 0.985353 0 50.3481 GTEX-WK11-0008-SM-4OOSX C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 828 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.991565 360096 0.972724 0.993618 0.832632 20722 1 76 0.00165558 156 0 6.23854e+07 0.0268956 171720 6.27861e+07 2.51556e+06 20736 3.10571e+07 0 0.140092 0.993618 0.827318 6.23854e+07 0.00232032 1.38939e+07 7.33003e+06 1.39513e+07 141 1.40137e+07 1.38028e+07 0.00198727 1.39589e+07 49.9021 0.002735 0.995671 0 50.103 GTEX-WK11-0326-SM-4OOS6 2 C1 2 pieces, 6x5.5 & 7x6mm; spermatogenesis 6.6 Testis Testis 0000473 835 1188 BP-27971 RNA isolation_PAXgene Tissue miRNA 07/25/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.988228 456201 0.910996 0.990878 0.709132 30969 1 76 0.00194336 134 0 5.30549e+07 0.0886674 362662 5.35433e+07 2.0524e+06 31006 2.63811e+07 0 0.201864 0.990878 0.702664 5.30549e+07 0.00274332 1.0686e+07 1.21467e+07 1.08069e+07 114 1.08755e+07 8.82778e+06 0.00234227 1.07523e+07 49.7152 0.00677324 0.993528 0 50.2814 GTEX-WK11-0526-SM-3NB3O 2 C1 2 pieces, 8x7 & 8x6mm; focal emphysema, congestion 6.4 Lung Lung 0008952 913 1111 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.980692 362359 0.967643 0.984779 0.754377 26389 1 76 0.00439115 276 0 1.16264e+08 0.0318983 403935 1.18062e+08 2.102e+07 26440 5.76221e+07 0 0.213266 0.984779 0.742894 1.16264e+08 0.00565032 2.55013e+07 1.73805e+07 2.56808e+07 303 2.59222e+07 1.63453e+07 0.00501812 2.57116e+07 49.796 0.00342139 0.988865 0 50.1754 GTEX-WK11-0626-SM-3NMAV 1 C1 2 pieces, 11x9 & 12x8mm; ~40% external and internal fibroadipose tissue 7.7 Heart Heart - Atrial Appendage 0006631 915 1110 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990052 456634 0.974179 0.992773 0.797888 23714 1 76 0.00410027 202 0 9.99504e+07 0.0253403 1.74867e+06 1.00678e+08 2.02091e+07 23747 4.96816e+07 0 0.176291 0.992773 0.792122 9.99504e+07 0.00543632 2.17483e+07 1.23663e+07 2.16822e+07 230 2.17724e+07 1.64979e+07 0.00476646 2.19151e+07 50.1633 0.0173689 0.995492 0 49.9239 GTEX-WK11-0826-SM-EZ6LH 2 C1 2 pieces, 8x7mm & 8.5x5.5mm; ~5% internal adipose tissue 5.7 Heart Heart - Left Ventricle 0006566 924 1102 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.988696 114191 0.988699 0.990057 0.843383 19549 1 76 0.00322168 368 0 1.16133e+08 0.0112577 8.12502e+06 1.17299e+08 8.54042e+06 19557 5.79166e+07 0 0.145316 0.990057 0.834997 1.16133e+08 0.00405966 2.52076e+07 5.6171e+07 2.59628e+07 331 2.56172e+07 4.48325e+06 0.0036401 2.56486e+07 50.0306 0.0692674 0.991417 0 50.738 GTEX-WK11-0926-SM-3NMAU 2 C1 2 pieces, 10x6 & 8x7mm; 10% external adipose 7 Thyroid Thyroid 0002046 930 1097 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.977629 292975 0.969185 0.980618 0.813758 24811 1 76 0.00406367 204 0 9.49951e+07 0.0304713 240958 9.68727e+07 1.99443e+07 24847 4.71897e+07 0 0.155426 0.980618 0.797986 9.49951e+07 0.00560759 2.0806e+07 1.15452e+07 2.08742e+07 210 2.09452e+07 1.74842e+07 0.00483327 2.10141e+07 50.0822 0.00248737 0.983607 0 50.0819 GTEX-WK11-1026-SM-4OOS8 2 C1 6 pieces, up to 5x2mm; superficial sloughing of squamous mucosa 6 Esophagus Esophagus - Mucosa 0006920 936 1091 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.980278 423184 0.972146 0.981686 0.797306 24180 1 76 0.00271139 371 0 1.05571e+08 0.0276708 739367 1.0754e+08 4.2319e+06 24210 5.23561e+07 0 0.17484 0.981686 0.782705 1.05571e+08 0.00315809 2.37326e+07 1.0488e+07 2.37701e+07 364 2.39404e+07 1.35784e+07 0.00293442 2.37199e+07 49.7687 0.00687527 0.983094 0 50.0394 GTEX-WK11-1126-SM-4OOSJ 2 C1 6 pieces, up to 7x3mm; well trimmed muscle 6.2 Esophagus Esophagus - Muscularis 0004648 937 1093 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.990811 1.0027e+06 0.970231 0.992258 0.807899 27587 1 76 0.00227469 524 0 2.92276e+08 0.0295489 6.60384e+06 2.94556e+08 1.23482e+07 27675 1.454e+08 0 0.162332 0.992258 0.801644 2.92276e+08 0.0031523 6.40211e+07 3.13696e+07 6.4558e+07 550 6.42954e+07 3.08661e+07 0.00271285 6.4682e+07 50.1499 0.0224196 0.993706 0 50.2088 GTEX-WK11-1226-SM-EAZ2V 1 C1 6 pieces, up to 8x3.5mm; all muscle, no mucosa; 20% adipose on deep surface in 3 of 6 pieces 5.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 939 1092 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.984641 269667 0.969255 0.985571 0.798702 23690 1 76 0.00240954 268 0 8.65117e+07 0.0305501 2.37848e+06 8.77782e+07 6.98876e+06 23722 4.30937e+07 0 0.170553 0.985571 0.787178 8.65117e+07 0.00339813 1.90173e+07 7.63955e+06 1.9309e+07 265 1.9202e+07 9.71176e+06 0.00290337 1.91968e+07 49.9932 0.0270965 0.986502 0 50.3805 GTEX-WK11-1326-SM-4OOSI 2 C1 2 pieces, 7x7 & 8x8mm; 60% macrovesicular steatosis 6.4 Liver Liver 0001114 943 1089 BP-28091 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.990702 739937 0.979982 0.992362 0.842456 24217 1 76 0.00268731 518 0 2.66798e+08 0.0199478 9.92999e+06 2.68851e+08 1.07174e+07 24250 1.32745e+08 0 0.137526 0.992362 0.836021 2.66798e+08 0.00356934 5.82849e+07 8.13512e+07 5.97742e+07 555 5.85636e+07 1.58232e+07 0.00312759 5.98158e+07 50.5289 0.0369349 0.994021 0 50.6307 GTEX-WK11-2426-SM-3NMAA 1 C1 3 pieces, up to 9x7mm; no significant artifacts 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 979 1061 BP-28095 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.986958 327964 0.974649 0.989743 0.819047 24172 1 76 0.00407841 277 0 1.04101e+08 0.0249725 446718 1.05179e+08 2.11661e+07 24201 5.17327e+07 0 0.155603 0.989743 0.810645 1.04101e+08 0.00530505 2.28228e+07 1.24633e+07 2.29895e+07 304 2.30493e+07 1.72574e+07 0.00469 2.30437e+07 49.9939 0.0042472 0.992528 0 50.1819 GTEX-WK11-2526-SM-3NM9Y 1 C1 2 pieces, 11x6 & 9.5x8mm; striations retained despite fragmentation 6.8 Muscle Muscle - Skeletal 0011907 982 1060 BP-28097 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.992358 731571 0.981957 0.994432 0.875345 20684 1 76 0.00373779 269 0 1.12144e+08 0.0176809 1.10335e+06 1.12772e+08 2.05115e+07 20696 5.58115e+07 0 0.106612 0.994432 0.870472 1.12144e+08 0.00497532 2.41716e+07 1.39778e+07 2.41758e+07 287 2.42783e+07 2.44338e+07 0.00435526 2.42919e+07 50.014 0.00978388 0.996507 0 50.0043 GTEX-WK11-2626-SM-4OOSK 1 C1 2 pieces, 10x9 & 9x7mm; except for ~5% autolyzed glands, tissue is muscular; 30% adipose in 1 piece; glands = 3, muscle = 1 (autolysis) 5.8 Prostate Prostate 0002367 1009 1033 BP-28097 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.984581 330338 0.973676 0.985513 0.816893 24243 1 76 0.00259184 376 0 1.11261e+08 0.0260326 935723 1.12896e+08 4.24331e+06 24281 5.51893e+07 0 0.156783 0.985513 0.805059 1.11261e+08 0.00306227 2.41094e+07 9.37199e+06 2.41203e+07 360 2.42705e+07 1.8511e+07 0.00282683 2.4068e+07 49.7905 0.00828833 0.986445 0 50.0114 GTEX-WK11-2726-SM-3NMAQ 1 C1 6 pieces, up to 8x3mm; subcutaneous adipose is up to 1 mm thick in 2 pieces 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1010 1033 BP-28097 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989772 316005 0.973363 0.992306 0.780068 25800 1 76 0.00398114 225 0 1.03389e+08 0.0263845 541036 1.0419e+08 2.10781e+07 25842 5.14106e+07 0 0.193296 0.992306 0.774066 1.03389e+08 0.00521777 2.27928e+07 1.31634e+07 2.28345e+07 249 2.29025e+07 1.70948e+07 0.00459787 2.29815e+07 50.086 0.00519276 0.994839 0 50.0458 GTEX-WL46-0002-SM-3PYK6 C1 Blood Whole Blood 0013756 856 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R01C01 GTEX-WL46-0002-SM-3PZ7T C1 Blood Whole Blood 0013756 856 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340002_R01C01 GTEX-WL46-0002-SM-4X61I C1 Blood Whole Blood 0013756 856 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WL46-0002-SM-5SOE8 C1 Blood Whole Blood 0013756 856 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-5226,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WL46-0006-SM-4OOS5 C1 8.1 Blood Whole Blood 0013756 856 BP-27115 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.981063 494908 0.97629 0.982431 0.788344 19687 1 76 0.00276491 127 0 8.91203e+07 0.0221049 362992 9.07141e+07 3.06936e+06 19696 4.42442e+07 0 0.187947 0.982431 0.774493 8.91203e+07 0.00348753 2.04354e+07 1.00189e+08 2.05991e+07 148 2.06821e+07 2.1316e+07 0.00312572 2.04985e+07 49.7771 0.0040015 0.983798 0 50.1995 GTEX-WL46-0008-SM-4OOSW C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 943 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.99152 606841 0.977903 0.992713 0.846863 21450 1 76 0.00203115 219 0 9.9356e+07 0.0217444 477819 1.00085e+08 2.96235e+06 21472 4.94399e+07 0 0.13104 0.992713 0.840692 9.9356e+07 0.00243772 2.21228e+07 1.05749e+07 2.22581e+07 248 2.23778e+07 2.35638e+07 0.00223419 2.21295e+07 49.721 0.00477411 0.993905 0 50.1525 GTEX-WL46-0011-R10A-SM-3MJFQ C1, A1 7.6 Brain Brain - Frontal Cortex (BA9) 0009834 865 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.931253 745844 0.960041 0.932651 0.854541 24693 1 76 0.00264623 374 0 1.14672e+08 0.039271 2.55571e+06 1.22953e+08 1.92474e+07 24712 5.69591e+07 0 0.105499 0.932651 0.796989 1.14672e+08 0.00489386 2.48532e+07 2.30043e+07 2.53316e+07 336 2.52949e+07 1.67552e+07 0.00376836 2.50365e+07 49.7433 0.0207861 0.934049 0 50.4767 GTEX-WL46-0011-R11A-SM-3MJFT C1, A1 7.2 Brain Brain - Cerebellar Hemisphere 0002037 865 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.986855 631969 0.947935 0.988951 0.767039 24302 1 76 0.00291789 272 0 1.04184e+08 0.051642 1.15896e+06 1.05348e+08 1.55262e+07 24330 5.17687e+07 0 0.180896 0.988951 0.758563 1.04184e+08 0.00499716 2.2357e+07 2.03757e+07 2.26411e+07 326 2.2691e+07 1.4247e+07 0.00395532 2.25181e+07 49.8087 0.0110013 0.991046 0 50.3156 GTEX-WL46-0011-R1A-SM-3LK6M C1, A1 6.6 Brain Brain - Hippocampus 0001954 865 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.874989 527577 0.956542 0.874186 0.841431 23806 1 76 0.00222236 271 0 7.98132e+07 0.0429622 2.96447e+06 9.13e+07 9.22862e+06 23826 3.96004e+07 0 0.11511 0.874186 0.735568 7.98132e+07 0.00367049 1.74315e+07 1.83015e+07 1.76799e+07 268 1.75715e+07 1.08012e+07 0.00294709 1.7478e+07 49.8665 0.0324696 0.873383 0 50.3537 GTEX-WL46-0011-R2A-SM-3LK6O C1, A1 7.6 Brain Brain - Substantia nigra 0002038 865 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 EXCLUDE 0.949778 580599 0.956706 0.950396 0.843988 24280 1 76 0.00221132 273 0 9.96435e+07 0.042942 4.63432e+06 1.04844e+08 9.79233e+06 24297 4.9534e+07 0 0.112718 0.950396 0.802123 9.96435e+07 0.00337193 2.16797e+07 2.28421e+07 2.20159e+07 319 2.1974e+07 1.19648e+07 0.00279125 2.17859e+07 49.785 0.044202 0.951013 0 50.3847 GTEX-WL46-0011-R3A-SM-3TW8E C1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 865 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992283 656091 0.957977 0.993957 0.850756 23851 1 76 0.00256794 270 0 9.42788e+07 0.0414126 2.60241e+06 9.4852e+07 1.29219e+07 23862 4.69521e+07 0 0.107221 0.993957 0.845614 9.42788e+07 0.00406522 2.05809e+07 2.16805e+07 2.07252e+07 282 2.07648e+07 1.37609e+07 0.00331532 2.069e+07 49.9097 0.0274365 0.99563 0 50.1747 GTEX-WL46-0011-R5A-SM-3LK6V C1, A1 7.6 Brain Brain - Caudate (basal ganglia) 0001873 865 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.976568 475169 0.956099 0.977346 0.828652 23934 1 76 0.00223748 271 0 7.95913e+07 0.0434852 2.98708e+06 8.14361e+07 7.02249e+06 23953 3.9576e+07 0 0.127447 0.977346 0.80988 7.95913e+07 0.00339995 1.73446e+07 1.84046e+07 1.75522e+07 268 1.75191e+07 9.8932e+06 0.00281825 1.74416e+07 49.8891 0.0366801 0.978124 0 50.2974 GTEX-WL46-0011-R6A-SM-3LK6X C1, A1 6.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 865 BP-27617 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.974962 770712 0.951358 0.975781 0.812365 25429 1 76 0.00231217 274 0 1.01562e+08 0.0481566 4.73788e+06 1.04083e+08 1.02207e+07 25458 5.04395e+07 0 0.138992 0.975781 0.79269 1.01562e+08 0.00347049 2.21159e+07 2.54776e+07 2.23471e+07 327 2.23775e+07 1.39996e+07 0.00289085 2.21815e+07 49.7801 0.0455202 0.976599 0 50.26 GTEX-WL46-0011-R7A-SM-3LK7X C1, A1 7.5 Brain Brain - Putamen (basal ganglia) 0001874 865 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.970863 560869 0.95802 0.971936 0.846072 23282 1 76 0.00221779 269 0 8.73247e+07 0.0416597 5.0854e+06 8.98461e+07 8.14196e+06 23296 4.34156e+07 0 0.111948 0.971936 0.822328 8.73247e+07 0.00347429 1.89246e+07 2.44671e+07 1.93517e+07 328 1.92132e+07 9.22836e+06 0.00284534 1.91471e+07 49.9138 0.0566013 0.97301 0 50.5579 GTEX-WL46-0011-R9A-SM-3MJFP C1, A1 7.4 Brain Brain - Spinal cord (cervical c-1) 0006469 865 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.975642 582819 0.962013 0.978058 0.820658 24530 1 76 0.00266448 402 0 1.35832e+08 0.0375246 2.78597e+06 1.38879e+08 2.08224e+07 24561 6.75226e+07 0 0.141355 0.978058 0.802651 1.35832e+08 0.00497661 2.98024e+07 1.95458e+07 3.05574e+07 348 3.04675e+07 2.117e+07 0.00381769 3.02029e+07 49.782 0.0200604 0.980474 0 50.6254 GTEX-WL46-0126-SM-3TW8I 2 C1 2 pieces ~9x5mm 6.1 Thyroid Thyroid 0002046 940 844 BP-27629 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.990114 470467 0.95922 0.991879 0.794461 25454 1 76 0.00269365 277 0 1.03707e+08 0.0403292 415104 1.04556e+08 1.35274e+07 25489 5.1644e+07 0 0.164759 0.991879 0.788009 1.03707e+08 0.00432654 2.24751e+07 2.30784e+07 2.26493e+07 291 2.26879e+07 1.85518e+07 0.00350864 2.26136e+07 49.918 0.00397015 0.993644 0 50.1931 GTEX-WL46-0326-SM-3LK6Y 1 C1 2 pieces ~9x7mm 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 946 840 BP-27629 RNA isolation_PAXgene Tissue miRNA 07/19/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.956932 605053 0.967614 0.957679 0.782157 24904 1 76 0.00245503 386 0 1.37947e+08 0.0319833 615622 1.44043e+08 1.50275e+07 24954 6.84937e+07 0 0.185457 0.957679 0.749055 1.37947e+08 0.00360299 3.01945e+07 2.40633e+07 3.04933e+07 345 3.05405e+07 2.35023e+07 0.00302856 3.02657e+07 49.774 0.00427389 0.958425 0 50.2461 GTEX-WL46-0426-SM-3TW8J 1 C1 2 pieces ~6x3mm ~10% interstial fat aggregates up to ~1mm in dimension 8.1 Nerve Nerve - Tibial 0001323 955 832 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.992511 358914 0.969014 0.99399 0.794614 25136 1 76 0.00263349 290 0 1.15458e+08 0.0306456 457533 1.16156e+08 1.4937e+07 25172 5.75138e+07 0 0.1744 0.99399 0.789838 1.15458e+08 0.00400598 2.53646e+07 1.49347e+07 2.54978e+07 304 2.55338e+07 1.91991e+07 0.00331871 2.54905e+07 49.9575 0.00393894 0.995468 0 50.1309 GTEX-WL46-0526-SM-3LK7W 1 C1 2 pieces ~2mm d. Good clean specimens 7.1 Blood Vessel Artery - Tibial 0007610 958 831 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.941071 334255 0.968676 0.94225 0.818865 22475 1 76 0.00253807 279 0 9.48764e+07 0.0309757 452625 1.00691e+08 9.23043e+06 22499 4.71195e+07 0 0.149811 0.94225 0.771575 9.48764e+07 0.00384932 2.0231e+07 1.31113e+07 2.0479e+07 267 2.0475e+07 1.73824e+07 0.00319287 2.03509e+07 49.8479 0.00449517 0.94343 0 50.3046 GTEX-WL46-0626-SM-3LK7R 1 C1 2 pieces ~6x3mm, ~10% interstitial fat 8 Muscle Muscle - Skeletal 0011907 961 828 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.974674 275344 0.981846 0.975522 0.873204 21100 1 76 0.00197717 270 0 1.16097e+08 0.0179478 1.08689e+06 1.1901e+08 1.12657e+07 21119 5.77266e+07 0 0.108642 0.975522 0.85183 1.16097e+08 0.00307505 2.52252e+07 1.19735e+07 2.53162e+07 319 2.53202e+07 2.43e+07 0.00252563 2.53187e+07 49.9986 0.00913272 0.97637 0 50.09 GTEX-WL46-0626-SM-CYKVU 1 C1 2 pieces ~6x3mm, ~10% interstitial fat 8 Muscle Muscle - Skeletal 0011907 961 828 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 RIP-Seq GTEX-WL46-0726-SM-3LK5Z 2 C1 2 pieces ~10x4mm, unusally badly autolyzed 7.4 Heart Heart - Atrial Appendage 0006631 970 820 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.960263 280538 0.971974 0.961467 0.795051 22874 1 76 0.00231213 155 0 7.6037e+07 0.0277418 1.48593e+06 7.90844e+07 7.30662e+06 22898 3.77841e+07 0 0.176923 0.961467 0.764416 7.6037e+07 0.00347663 1.65067e+07 1.16205e+07 1.66836e+07 190 1.66932e+07 1.13133e+07 0.00289365 1.6583e+07 49.8344 0.0187892 0.962672 0 50.2665 GTEX-WL46-0926-SM-3LK7T 1 C1 2 pieces ~7x4mm 6.8 Heart Heart - Left Ventricle 0006566 977 814 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.883975 252856 0.977468 0.884939 0.845766 21738 1 76 0.00216214 265 0 9.01731e+07 0.0222815 5.00432e+06 1.01898e+08 9.17442e+06 21755 4.48736e+07 0 0.131703 0.884939 0.748451 9.01731e+07 0.00359116 1.9983e+07 1.52392e+07 2.03387e+07 322 2.03343e+07 1.14019e+07 0.00287587 2.00858e+07 49.6926 0.0491112 0.885902 0 50.441 GTEX-WL46-0926-SM-CYKVT 1 C1 2 pieces ~7x4mm 6.8 Heart Heart - Left Ventricle 0006566 977 814 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 RIP-Seq GTEX-WL46-1026-SM-CYKVS 3 C1 2 pieces ~7x4mm. Apparent emphysematous changes but extremly autolyzed 6.2 Lung Lung 0008952 979 813 BP-27853 RNA isolation_PAXgene Tissue miRNA 07/24/2012 RIP-Seq GTEX-WL46-1226-SM-4OOS4 2 C1 6 pieces ~5x2mm, 20--50% muscle, squamous mucosa present 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 987 807 BP-27869 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 EXCLUDE 0.981522 435272 0.969222 0.982906 0.763919 23739 1 76 0.00280921 191 0 8.92505e+07 0.0305409 995459 9.08026e+07 3.92092e+06 23762 4.42069e+07 0 0.205302 0.982906 0.750861 8.92505e+07 0.00335616 1.99328e+07 1.52699e+07 1.99136e+07 212 2.01558e+07 1.34822e+07 0.0030823 1.98275e+07 49.5895 0.0109629 0.98429 0 49.976 GTEX-WL46-2026-SM-3LK7U 2 C1 2 pieces ~7x7mm 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1021 780 BP-27871 RNA isolation_PAXgene Tissue miRNA 07/24/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.959471 230015 0.97265 0.960555 0.837838 22193 1 76 0.00252509 196 0 7.30802e+07 0.0270486 1.511e+06 7.60812e+07 7.33917e+06 22212 3.6308e+07 0 0.134813 0.960555 0.804789 7.30802e+07 0.00363999 1.60472e+07 1.13628e+07 1.62651e+07 204 1.62632e+07 1.05571e+07 0.00308191 1.61332e+07 49.7994 0.0198603 0.961639 0 50.3371 GTEX-WL46-2826-SM-3LK81 1 C1 4 pieces 4x3mm 7.7 Brain Brain - Cerebellum 0002037 1050 757 BP-30218 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.877834 331996 0.954138 0.87829 0.763862 22810 1 76 0.00247432 131 0 7.14733e+07 0.0453542 649299 8.13777e+07 7.95753e+06 22836 3.54629e+07 0 0.190276 0.87829 0.670893 7.14733e+07 0.00387752 1.55541e+07 1.05799e+07 1.57104e+07 162 1.57304e+07 1.04281e+07 0.00317556 1.55769e+07 49.7549 0.00797883 0.878746 0 50.2501 GTEX-WL46-2926-SM-3LK82 1 C1 4 pieces 4x4mm 7 Brain Brain - Cortex 0001870 1053 754 BP-30218 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.980265 394391 0.967271 0.981131 0.849136 24287 1 76 0.00215458 373 0 1.04971e+08 0.0322752 2.5823e+06 1.0699e+08 8.62701e+06 24307 5.221e+07 0 0.118135 0.981131 0.833113 1.04971e+08 0.00329659 2.31831e+07 1.30071e+07 2.33504e+07 334 2.32988e+07 1.43381e+07 0.00272508 2.33136e+07 50.0159 0.0241359 0.981997 0 50.1798 GTEX-WL46-3026-SM-3LK7Z 1 C1 1 piece, moderately autolyzed 6.9 Pituitary Pituitary 0000007 1054 754 BP-30217 RNA isolation_PAXgene Tissue miRNA 08/27/2012 LCSET-2234 12/16/2012 TruSeq.v1 RNASEQ 0.965023 870612 0.934566 0.965951 0.720391 25405 1 76 0.00249732 149 0 7.99765e+07 0.0651294 319562 8.27956e+07 7.48438e+06 25451 3.97350e+07 0 0.214175 0.965951 0.695862 7.99765e+07 0.00367594 1.68822e+07 2.9263e+07 1.70476e+07 166 1.70588e+07 1.18247e+07 0.00308606 1.69638e+07 49.8604 0.00385965 0.966878 0 50.2438 GTEX-WOFL-0003-SM-3PYKF C1 Blood Whole Blood 0013756 515 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R01C02 GTEX-WOFL-0003-SM-3PZ7H C1 Blood Whole Blood 0013756 515 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8976358006_R03C01 GTEX-WOFL-0003-SM-4SVQY C1 Blood Whole Blood 0013756 515 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WOFL-0003-SM-6WBS3 C1 Blood Whole Blood 0013756 515 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WOFL-0006-SM-3TW8K C1 7.2 Blood Whole Blood 0013756 515 BP-27115 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.940748 1.08919e+06 0.96202 0.942513 0.788035 18107 1 76 0.00280772 139 0 1.20694e+08 0.0359748 127833 1.28055e+08 1.84198e+07 18111 6.00166e+07 0 0.173985 0.942513 0.742734 1.20694e+08 0.00485852 2.79005e+07 2.84975e+08 2.87004e+07 191 2.86682e+07 3.42205e+07 0.0038312 2.8161e+07 49.5537 0.000998265 0.944278 0 50.7066 GTEX-WOFL-0008-SM-4OOSZ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 577 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.993054 237401 0.977943 0.99433 0.842939 19286 1 76 0.00160327 123 0 5.24166e+07 0.0217074 161550 5.27154e+07 2.00454e+06 19300 2.61199e+07 0 0.135005 0.99433 0.838159 5.24166e+07 0.00225047 1.17077e+07 5.46044e+06 1.1778e+07 114 1.18031e+07 1.28317e+07 0.00192645 1.17494e+07 49.886 0.00306457 0.995607 0 50.1496 GTEX-WOFL-0126-SM-3MJG2 1 C1 6 pieces, up to 8x3mm; most subcutaneous adipose tissue trimmed 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 576 1100 BP-28093 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.985383 323933 0.969079 0.987691 0.710597 26042 1 76 0.00297755 285 0 1.10333e+08 0.0307088 844387 1.11708e+08 1.75179e+07 26097 5.48297e+07 0 0.258483 0.987691 0.70185 1.10333e+08 0.00498327 2.42436e+07 1.30561e+07 2.44416e+07 270 2.44939e+07 1.58134e+07 0.00397807 2.44345e+07 49.9393 0.00755888 0.989999 0 50.2034 GTEX-WOFL-0626-SM-3MJG3 2 C1 2 pieces, 8x7 & 8x6mm; severely atrophic with 20-30% internal adipose, probably due to ischemia 6.5 Muscle Muscle - Skeletal 0011907 614 1065 BP-28095 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.949138 280968 0.972149 0.951462 0.788849 24654 1 76 0.00274385 378 0 1.16318e+08 0.0276516 2.14226e+06 1.22251e+08 1.88292e+07 24697 5.78394e+07 0 0.1833 0.951462 0.75056 1.16318e+08 0.00512609 2.52355e+07 1.6082e+07 2.5976e+07 335 2.59229e+07 1.73717e+07 0.00393206 2.55328e+07 49.621 0.0175234 0.953787 0 50.723 GTEX-WOFL-0726-SM-3MJG4 1 C1 2 pieces, 7x5 & 8x7mm; 6 Thyroid Thyroid 0002046 616 1064 BP-28095 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.983903 296378 0.962314 0.986441 0.728718 24910 1 76 0.00293537 165 0 9.05582e+07 0.0374368 364630 9.1803e+07 1.42327e+07 24952 4.5003e+07 0 0.233596 0.986441 0.718837 9.05582e+07 0.00520757 1.95804e+07 1.44278e+07 1.98578e+07 194 1.98962e+07 1.31425e+07 0.00406855 1.9763e+07 49.8321 0.00397188 0.988978 0 50.3518 GTEX-WOFL-0826-SM-3MJG1 1 C1 2 pieces, 9x8 & 7x6mm; gynecomastia with hyalinized stroma and ductal hyperplasia 6.1 Breast Breast - Mammary Tissue 0008367 621 1059 BP-28095 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987175 312901 0.97455 0.989519 0.780838 24979 1 76 0.0028393 284 0 1.20189e+08 0.0251384 646417 1.21462e+08 1.9375e+07 25020 5.97535e+07 0 0.193711 0.989519 0.772654 1.20189e+08 0.0048455 2.63139e+07 1.66081e+07 2.67064e+07 327 2.67663e+07 2.08781e+07 0.00384002 2.65248e+07 49.7734 0.00532195 0.991863 0 50.3701 GTEX-WOFL-1226-SM-4OOST 2 C1 2 pieces, 8x7 & 7x7mm; 5.7 Heart Heart - Atrial Appendage 0006631 636 1047 BP-28097 RNA isolation_PAXgene Tissue miRNA 07/26/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.990889 645658 0.97776 0.992469 0.792614 25416 1 76 0.00190215 518 0 1.88919e+08 0.0220299 6.90987e+06 1.90353e+08 7.95591e+06 25472 9.40134e+07 0 0.185146 0.992469 0.786644 1.88919e+08 0.00276382 4.12058e+07 2.63928e+07 4.15352e+07 511 4.13131e+07 2.07282e+07 0.0023323 4.17008e+07 50.2336 0.0363003 0.994048 0 50.199 GTEX-WOFM-0001-SM-4OOT2 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -163 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.989813 852104 0.967975 0.990872 0.783425 21940 1 76 0.00270014 180 0 9.34254e+07 0.0313954 363799 9.4286e+07 2.77261e+06 21981 4.64522e+07 0 0.18455 0.990872 0.776274 9.34254e+07 0.00305349 2.08076e+07 1.17265e+07 2.08996e+07 190 2.1048e+07 2.05709e+07 0.00287663 2.07636e+07 49.6599 0.00385846 0.991932 0 50.1103 GTEX-WOFM-0003-SM-3PYK9 B1 Blood Whole Blood 0013756 -163 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R04C02 GTEX-WOFM-0003-SM-3PZ7W B1 Blood Whole Blood 0013756 -163 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340001_R02C01 GTEX-WOFM-0003-SM-4X61U B1 Blood Whole Blood 0013756 -163 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WOFM-0003-SM-5JK3H B1 Blood Whole Blood 0013756 -163 BP-27116 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/09/2012 LCSET-5036 03/12/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-WOFM-0005-SM-3MJF3 B1 7.7 Blood Whole Blood 0013756 -163 BP-27115 RNA isolation_PAXgene Blood RNA (Manual) 07/09/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.967957 1.43557e+06 0.947611 0.970578 0.769964 20655 1 76 0.00338349 158 0 1.09949e+08 0.0515301 423420 1.13282e+08 1.79309e+07 20675 5.46483e+07 0 0.177647 0.970578 0.74731 1.09949e+08 0.00593553 2.40214e+07 1.14458e+08 2.4516e+07 190 2.46143e+07 2.41659e+07 0.00465607 2.42146e+07 49.5907 0.00373774 0.973198 0 50.5095 GTEX-WOFM-0008-SM-4OOSY B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 218 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.993403 303656 0.981573 0.994618 0.868068 19013 1 76 0.00161689 116 0 5.39609e+07 0.0180922 153240 5.42529e+07 2.10645e+06 19023 2.68879e+07 0 0.113505 0.994618 0.863395 5.39609e+07 0.00227692 1.21613e+07 5.36404e+06 1.22001e+07 114 1.22372e+07 1.43572e+07 0.0019465 1.21912e+07 49.906 0.00282455 0.995833 0 50.0796 GTEX-WOFM-0126-SM-3MJFE 1 B1 2 pieces ~7x6, one with marked congestion/chronic pneumonitis 7.5 Lung Lung 0008952 157 1297 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.973087 274304 0.972768 0.975337 0.80806 25134 1 76 0.00281371 376 0 1.10148e+08 0.0268966 779575 1.12933e+08 1.78643e+07 25168 5.47621e+07 0 0.164708 0.975337 0.788131 1.10148e+08 0.00501714 2.42179e+07 1.14883e+07 2.46511e+07 332 2.46416e+07 1.85849e+07 0.00391288 2.44635e+07 49.8186 0.006903 0.977588 0 50.4432 GTEX-WOFM-0326-SM-4OOSL 1 B1 2 pieces ~11x4mm, one with adherent fat/fibrous nubbin up to 5mm 7 Prostate Prostate 0002367 171 1284 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.99171 218231 0.9652 0.993355 0.734873 23409 1 76 0.00189044 123 0 5.3255e+07 0.0345574 311911 5.36113e+07 2.12886e+06 23436 2.64987e+07 0 0.230327 0.993355 0.72999 5.3255e+07 0.00270416 1.17187e+07 5.23139e+06 1.18304e+07 133 1.18072e+07 6.87534e+06 0.00229662 1.18285e+07 50.0451 0.00581801 0.994999 0 50.2372 GTEX-WOFM-0426-SM-4OOSG 1 B1 6 pieces ~4x3mm 10-15% squamous mucosa, numerous submucosal glands present, representative ones encircled 7 Esophagus Esophagus - Gastroesophageal Junction 0004550 176 1279 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 EXCLUDE 0.989445 320517 0.976615 0.99063 0.838944 23043 1 76 0.00231469 211 0 8.63572e+07 0.0230686 475123 8.7174e+07 2.86747e+06 23061 4.29498e+07 0 0.137671 0.99063 0.831083 8.63572e+07 0.00282812 1.94096e+07 9.3406e+06 1.94985e+07 221 1.95468e+07 1.62854e+07 0.00257109 1.94738e+07 49.9066 0.00545028 0.991815 0 50.1143 GTEX-WOFM-0526-SM-4OOS2 1 B1 6 pieces ~6x5mm, all muscularis, should be labeled as such 7.4 Esophagus Esophagus - Muscularis 0004648 182 1274 BP-28813 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.992856 193104 0.974959 0.994207 0.825844 20971 1 76 0.00169119 130 0 5.47351e+07 0.0248251 440238 5.5054e+07 2.16214e+06 20991 2.72605e+07 0 0.149116 0.994207 0.821059 5.47351e+07 0.00252859 1.18404e+07 4.49981e+06 1.20046e+07 145 1.19279e+07 8.9473e+06 0.00210932 1.19902e+07 50.1302 0.00799647 0.995557 0 50.3445 GTEX-WOFM-0626-SM-4OOS3 1 B1 6 pieces ~5x2mm, squamous mucosa is ~20% of thickness. should be labeled mucosa 9 Esophagus Esophagus - Mucosa 0006920 187 1270 BP-28813 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.989318 436637 0.977937 0.99073 0.833648 22336 1 76 0.00223943 211 0 8.76606e+07 0.0218226 453866 8.84808e+07 2.73186e+06 22354 4.36037e+07 0 0.144289 0.99073 0.82592 8.76606e+07 0.00272455 1.97415e+07 1.01472e+07 1.98925e+07 213 1.99758e+07 1.7467e+07 0.00248164 1.97862e+07 49.7616 0.00512954 0.992143 0 50.1905 GTEX-WOFM-0726-SM-3MJF8 1 B1 1 piece ~12x8mm 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 191 1266 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.969935 251216 0.972893 0.972167 0.820197 23914 1 76 0.00264951 276 0 1.02482e+08 0.0268561 880966 1.05416e+08 1.68267e+07 23941 5.09678e+07 0 0.152696 0.972167 0.797369 1.02482e+08 0.00492662 2.21617e+07 1.06644e+07 2.26839e+07 328 2.26652e+07 1.64553e+07 0.00378545 2.23976e+07 49.7031 0.00835706 0.974399 0 50.5822 GTEX-WOFM-1126-SM-4OOSB 1 B1 1 piece ~13x10mm. Spermatogenesis is present/within normal limits 6.3 Testis Testis 0000473 214 1245 BP-28357 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.988231 457034 0.918786 0.990604 0.725425 31375 1 76 0.00187944 139 0 6.09587e+07 0.0809475 847679 6.15369e+07 2.53385e+06 31425 3.03307e+07 0 0.193361 0.990604 0.718609 6.09587e+07 0.00268397 1.24587e+07 1.51015e+07 1.26307e+07 131 1.26752e+07 9.41771e+06 0.00228074 1.25485e+07 49.7489 0.0137751 0.992978 0 50.3427 GTEX-WOFM-1326-SM-3MJFR 0 B1 1piece ~17x12mm. Minimal interstitial fat 7 Muscle Muscle - Skeletal 0011907 224 1236 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.932919 388280 0.98046 0.935912 0.870458 22874 1 76 0.0025032 384 0 1.52834e+08 0.01932 1.76117e+06 1.63299e+08 2.67007e+07 22894 7.5925e+07 0 0.110002 0.935912 0.814672 1.52834e+08 0.00513043 3.29302e+07 2.02636e+07 3.38007e+07 357 3.38725e+07 2.88295e+07 0.00381261 3.32858e+07 49.5632 0.0107849 0.938904 0 50.6523 GTEX-WOFM-1626-SM-3MJFX 0 B1 2 pieces ~4mm d. Good clean specimens 6.4 Nerve Nerve - Tibial 0001323 238 1223 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.977427 305345 0.967091 0.979474 0.773798 25333 1 76 0.0028411 280 0 1.13488e+08 0.0326327 605823 1.15867e+08 1.7376e+07 25385 5.64347e+07 0 0.193292 0.979474 0.757916 1.13488e+08 0.00493483 2.47577e+07 1.18837e+07 2.51187e+07 328 2.51174e+07 1.75766e+07 0.00388578 2.49804e+07 49.8633 0.00522862 0.981521 0 50.3619 GTEX-WOFM-1726-SM-3MJFA 0 B1 2 pieces ~2mm d. Good clean specimens 7 Blood Vessel Artery - Tibial 0007610 240 1221 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.979807 247506 0.975463 0.981973 0.841043 21091 1 76 0.00258141 213 0 8.89187e+07 0.0241689 362956 9.05511e+07 1.30073e+07 21114 4.42145e+07 0 0.134419 0.981973 0.825882 8.89187e+07 0.00462929 1.90652e+07 7.35197e+06 1.93855e+07 224 1.94043e+07 1.70726e+07 0.00360309 1.92297e+07 49.774 0.0040083 0.984139 0 50.4165 GTEX-WOFM-1926-SM-4OOSP 1 B1 6 pieces ~7x5mm, 60-70% muscularis, rest is fat/mucosa 6.7 Colon Colon - Sigmoid 0001159 258 1204 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.98772 393658 0.971921 0.988933 0.815473 23970 1 76 0.00273645 282 0 9.71856e+07 0.0265097 1.0627e+06 9.82732e+07 3.33546e+06 24011 4.82207e+07 0 0.156448 0.988933 0.806448 9.71856e+07 0.00317809 2.16506e+07 1.15353e+07 2.16841e+07 311 2.17925e+07 1.44723e+07 0.002957 2.16551e+07 49.8418 0.0108137 0.990146 0 50.0387 GTEX-WOFM-2026-SM-4OOSQ 1 B1 6 pieces ~7x4mm, mucosa is ~10% of thickness, well preserved 7.3 Colon Colon - Transverse 0001157 269 1194 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.988671 358283 0.973995 0.989908 0.828555 23881 1 76 0.00269647 279 0 1.01088e+08 0.0242099 1.37825e+06 1.02118e+08 3.02448e+06 23913 5.02229e+07 0 0.145441 0.989908 0.820193 1.01088e+08 0.00312094 2.25025e+07 1.27872e+07 2.27287e+07 329 2.27273e+07 1.55881e+07 0.00290844 2.26163e+07 49.8776 0.0134966 0.991146 0 50.25 GTEX-WOFM-2126-SM-4OOSR 1 B1 3 pieces ~2.5mm, ranging from 30%-90% glandular tissue, delineated; rest is fibrovascular/muscular tissue 7.6 Salivary Gland Minor Salivary Gland 0006330 274 1189 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.98651 444503 0.969585 0.987619 0.772313 24835 1 76 0.00251997 211 0 9.2809e+07 0.0301124 516700 9.39725e+07 3.28744e+06 24881 4.60795e+07 0 0.197273 0.987619 0.762751 9.2809e+07 0.00302806 2.07229e+07 1.32899e+07 2.0731e+07 243 2.09046e+07 1.34413e+07 0.00277373 2.06565e+07 49.7015 0.00549842 0.988728 0 50.0098 GTEX-WQUQ-0002-SM-3PYK7 C1 Blood Whole Blood 0013756 315 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R03C02 GTEX-WQUQ-0002-SM-3PZ78 C1 Blood Whole Blood 0013756 315 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660004_R01C01 GTEX-WQUQ-0002-SM-4X62H C1 Blood Whole Blood 0013756 315 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WQUQ-0002-SM-6WBSD C1 Blood Whole Blood 0013756 315 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WQUQ-0006-SM-3MJF4 C1 8.8 Blood Whole Blood 0013756 315 BP-27277 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984112 1.6898e+06 0.939665 0.986532 0.719507 21569 1 76 0.00324885 149 0 9.62736e+07 0.0599141 315099 9.75878e+07 1.52972e+07 21599 4.7865e+07 0 0.220158 0.986532 0.709817 9.62736e+07 0.00546575 2.06655e+07 6.61584e+07 2.09582e+07 169 2.10533e+07 1.73292e+07 0.00435458 2.08055e+07 49.7039 0.00322888 0.988953 0 50.3516 GTEX-WQUQ-0008-SM-4OOT1 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 405 BP-31959 RNA isolation_Trizol Manual (Cell Pellet) 10/09/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.991232 793870 0.978272 0.992178 0.846615 21833 1 76 0.00208818 283 0 1.05708e+08 0.0213423 286481 1.06541e+08 3.09191e+06 21854 5.2592e+07 0 0.131658 0.992178 0.839992 1.05708e+08 0.00244878 2.37936e+07 9.84576e+06 2.3819e+07 287 2.39874e+07 2.44354e+07 0.00226831 2.37297e+07 49.7299 0.00268893 0.993124 0 50.0267 GTEX-WQUQ-0126-SM-4OOSS 2 C1 2 pieces ~10x9mm; 40% of each is cortex, delineated, 60% fat/fibrous tissue 7.8 Adrenal Gland Adrenal Gland 0002369 356 1333 BP-28275 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.989904 469829 0.975219 0.991271 0.811665 23185 1 76 0.00217555 269 0 1.00641e+08 0.02449 990987 1.01527e+08 3.19078e+06 23217 5.00527e+07 0 0.163554 0.991271 0.804581 1.00641e+08 0.00260557 2.20853e+07 1.0442e+07 2.22421e+07 324 2.23679e+07 1.58257e+07 0.00239026 2.20918e+07 49.6895 0.00976083 0.992639 0 50.177 GTEX-WQUQ-0326-SM-EWRM7 2 C1 2 pieces ~8x6mm; spermatogenesis is present 5.5 Testis Testis 0000473 382 1309 BP-28275 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.987924 758625 0.922208 0.990909 0.7334 34601 1 76 0.00229432 290 0 1.31847e+08 0.0774232 1.38626e+06 1.33057e+08 8.53351e+06 34686 6.5601e+07 0 0.188808 0.990909 0.726733 1.31847e+08 0.00304124 2.67966e+07 2.80023e+07 2.70838e+07 316 2.7218e+07 2.17081e+07 0.00265792 2.6984e+07 49.7842 0.0104186 0.993893 0 50.2665 GTEX-WQUQ-0426-SM-3MJFU 1 C1 6 pieces ~7x2.5mm; squamous epithelium is ~2% thickness 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 404 1287 BP-28275 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.980534 315602 0.970358 0.98289 0.800178 25067 1 76 0.00282529 314 0 1.08042e+08 0.0293705 795771 1.09922e+08 1.7485e+07 25109 5.37318e+07 0 0.17018 0.98289 0.786486 1.08042e+08 0.0050702 2.33536e+07 1.38871e+07 2.36418e+07 326 2.36796e+07 1.84011e+07 0.00394505 2.35535e+07 49.8664 0.00723939 0.985245 0 50.3067 GTEX-WQUQ-1326-SM-3MJFF 1 C1 2 pieces ~ !0x6mm 7 Heart Heart - Atrial Appendage 0006631 484 1214 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984684 289163 0.972944 0.986925 0.800759 24257 1 76 0.00261663 268 0 1.07459e+08 0.0268453 2.15316e+06 1.08883e+08 1.54389e+07 24295 5.34581e+07 0 0.172185 0.986925 0.790289 1.07459e+08 0.00487983 2.30305e+07 1.47175e+07 2.3725e+07 327 2.37144e+07 1.48148e+07 0.00374566 2.32447e+07 49.5 0.019775 0.989166 0 50.7427 GTEX-WQUQ-1426-SM-3MJFD 1 C1 2 pieces~7x6mm patchy moderate interstitial fibrosis/infacrcts, representative area delineated 6.9 Heart Heart - Left Ventricle 0006566 486 1213 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.951891 373920 0.980227 0.953788 0.828714 23002 1 76 0.00255809 372 0 1.28219e+08 0.0196256 4.54557e+06 1.34432e+08 2.11145e+07 23025 6.37534e+07 0 0.151513 0.953788 0.790417 1.28219e+08 0.00471447 2.78853e+07 3.30712e+07 2.87251e+07 341 2.86738e+07 1.5753e+07 0.00363414 2.81088e+07 49.5025 0.0338133 0.955684 0 50.7418 GTEX-WQUQ-1526-SM-4OOSM 1 C1 6 pieces ~8x1.5mm, 10% atherosis 7.4 Blood Vessel Artery - Aorta 0001496 487 1212 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.991661 255871 0.977662 0.993202 0.841834 20725 1 76 0.00177923 128 0 5.76055e+07 0.0219162 112413 5.79998e+07 2.30723e+06 20736 2.86753e+07 0 0.135828 0.993202 0.836111 5.76055e+07 0.00256214 1.23906e+07 4.11751e+06 1.24981e+07 140 1.24889e+07 1.14425e+07 0.00217008 1.24894e+07 50.001 0.00193816 0.994743 0 50.2158 GTEX-WQUQ-1626-SM-4OOSH 1 C1 6 pieces ~6x2mm, squamous mucosa is ~10-15% thickness 7.9 Esophagus Esophagus - Mucosa 0006920 489 1211 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.989917 276508 0.973901 0.990986 0.810993 22609 1 76 0.00236252 168 0 8.21847e+07 0.0258295 230789 8.29323e+07 2.70211e+06 22626 4.08738e+07 0 0.162908 0.990986 0.803682 8.21847e+07 0.00283802 1.84497e+07 9.97373e+06 1.8544e+07 188 1.8639e+07 1.5877e+07 0.00260001 1.84499e+07 49.745 0.00278286 0.992055 0 50.1275 GTEX-WQUQ-1826-SM-4OOSD 1 C1 6 pieces ~8x3mm, all muscularis, good specimens 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 492 1210 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.989838 257914 0.973437 0.99213 0.79948 22004 1 76 0.00183833 127 0 5.61475e+07 0.0263034 234981 5.65929e+07 2.35458e+06 22022 2.79316e+07 0 0.173957 0.99213 0.793188 5.61475e+07 0.00268855 1.21679e+07 4.74535e+06 1.22898e+07 136 1.22967e+07 9.58189e+06 0.00226246 1.22874e+07 49.9811 0.00415213 0.994422 0 50.2493 GTEX-WQUQ-1926-SM-4OOSA 1 C1 2 pieces ~7x7mm, 30% macrovesicular steatosis, moderate passive congestion 6.7 Liver Liver 0001114 494 1208 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773 08/22/2013 TruSeq.v1 RNASEQ 0.992283 206423 0.976915 0.993646 0.840013 19924 1 76 0.00201474 123 0 6.04664e+07 0.0211774 762618 6.08531e+07 2.32245e+06 19935 3.00729e+07 0 0.136902 0.993646 0.834675 6.04664e+07 0.00272466 1.31288e+07 8.94112e+06 1.32227e+07 150 1.32248e+07 1.06242e+07 0.00236921 1.32053e+07 49.9632 0.0125321 0.995008 0 50.1781 GTEX-WQUQ-2126-SM-4OOSO 1 C1 2 pieces ~8x7mm well preserved, Islets well visualized, representative ones encircled, 30% of one aliquot is parenchyma, 90% of the other, both delineated 6.8 Pancreas Pancreas 0001150 498 1205 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3773,LCSET-4048 09/15/2013 TruSeq.v1 RNASEQ 0.986277 496737 0.973466 0.987705 0.809326 22943 1 76 0.00267971 122 0 9.51317e+07 0.0261902 183708 9.63158e+07 3.50437e+06 22974 4.72251e+07 0 0.16414 0.987705 0.799376 9.51317e+07 0.00324072 2.16817e+07 2.91667e+07 2.19520e+07 139 2.20189e+07 2.6049e+07 0.00295981 2.1766e+07 49.7112 0.00190735 0.989133 0 50.3098 GTEX-WQUQ-2426-SM-4MVNW 1 C1 4 pieces ~20% lymphoid elements delineated, rest mainly mucosa ~4x2mm 5.7 Small Intestine Small Intestine - Terminal Ileum 0001211 507 1199 BP-28815 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.984903 336530 0.967683 0.987981 0.766715 24031 1 76 0.00243577 162 0 7.43911e+07 0.0318488 914538 7.52962e+07 6.60279e+06 24056 3.69358e+07 0 0.200967 0.987981 0.7575 7.43911e+07 0.00348738 1.64044e+07 1.17962e+07 1.64257e+07 202 1.64524e+07 8.16284e+06 0.00295994 1.65892e+07 50.2071 0.0121459 0.991058 0 50.0324 GTEX-WQUQ-2526-SM-4MVNO 2 C1 6 pieces ~7x4mm, mucosa moderately autoyzed, 10-20% of thickness 5.7 Colon Colon - Transverse 0001157 509 1198 BP-28884 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.989342 324455 0.972139 0.991894 0.810625 23812 1 76 0.00222819 166 0 7.29702e+07 0.0275611 536592 7.35665e+07 6.49095e+06 23838 3.6251e+07 0 0.161514 0.991894 0.804054 7.29702e+07 0.00309152 1.59415e+07 7.50367e+06 1.60251e+07 187 1.6054e+07 1.1216e+07 0.00265875 1.60934e+07 50.0613 0.00729397 0.994446 0 50.1309 GTEX-WQUQ-2626-SM-4MVNP 1 C1 6 pieces ~7x2mm, ~90% muscularis, representative area delineated 5.8 Colon Colon - Sigmoid 0001159 511 1196 BP-28884 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.986187 306935 0.969285 0.988732 0.818363 23620 1 76 0.0028172 157 0 7.25822e+07 0.0281656 291160 7.34094e+07 6.5886e+06 23639 3.59561e+07 0 0.150923 0.988732 0.809142 7.25822e+07 0.00370177 1.56941e+07 8.33608e+06 1.57636e+07 178 1.58082e+07 1.15837e+07 0.00325835 1.58286e+07 50.0323 0.00396625 0.991278 0 50.1104 GTEX-WRHK-0001-SM-4WWDD B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -16 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986531 911878 0.959691 0.989591 0.809418 22906 1 76 0.00265977 286 0 1.06296e+08 0.0397397 856038 1.07414e+08 1.4881e+07 22947 5.28101e+07 0 0.150273 0.989591 0.800992 1.06296e+08 0.00407614 2.33905e+07 2.87564e+07 2.3435e+07 271 2.35396e+07 2.42612e+07 0.00336576 2.36116e+07 50.0764 0.00796949 0.99265 0 50.0474 GTEX-WRHK-0003-SM-3PYK4 B1 Blood Whole Blood 0013756 -16 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R03C02 GTEX-WRHK-0003-SM-3PZ7S B1 Blood Whole Blood 0013756 -16 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340001_R01C01 GTEX-WRHK-0003-SM-4X61X B1 Blood Whole Blood 0013756 -16 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WRHK-0003-SM-6WBUL B1 Blood Whole Blood 0013756 -16 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WRHK-0005-SM-3MJF5 B1 8.8 Blood Whole Blood 0013756 -16 BP-27277 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.949828 2.23114e+06 0.912317 0.952577 0.712299 21444 1 76 0.00315507 159 0 9.50557e+07 0.0871677 377327 9.97879e+07 1.66278e+07 21467 4.72368e+07 0 0.200017 0.952577 0.67852 9.50557e+07 0.00553078 1.95188e+07 7.25258e+07 1.97437e+07 177 1.98225e+07 1.57567e+07 0.0043395 1.97152e+07 49.8644 0.00378129 0.955326 0 50.2864 GTEX-WRHK-0008-SM-4MVPA B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 299 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.991669 583839 0.977315 0.993613 0.861864 21236 1 76 0.00183294 284 0 9.60827e+07 0.0223549 441562 9.67003e+07 8.25566e+06 21251 4.78323e+07 0 0.115451 0.993613 0.856359 9.60827e+07 0.00243944 2.15247e+07 1.5602e+07 2.16531e+07 256 2.17268e+07 2.4859e+07 0.0021356 2.16365e+07 49.8959 0.00456629 0.995556 0 50.1487 GTEX-WRHK-0226-SM-4MVOH 1 B1 2 pieces, 13x7 & 11x8mm; good morphology; <5% adipose 6.6 Pancreas Pancreas 0001150 217 457 BP-28353 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.98864 535198 0.966697 0.991253 0.848905 20212 1 76 0.00210458 106 0 7.18042e+07 0.0329745 218149 7.24378e+07 6.35256e+06 20222 3.56886e+07 0 0.117791 0.991253 0.84148 7.18042e+07 0.00323361 1.6281e+07 2.90872e+07 1.65309e+07 115 1.65268e+07 2.11582e+07 0.00266761 1.6485e+07 49.9366 0.00301153 0.993865 0 50.3807 GTEX-WRHK-0426-SM-4MVOG 1 B1 6 pieces, up to 8x4mm; all have well trimmed muscle 9 Esophagus Esophagus - Muscularis 0004648 234 440 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.990875 403877 0.976274 0.993055 0.848093 20757 1 76 0.0020056 164 0 7.16078e+07 0.0234526 603196 7.21086e+07 6.111e+06 20769 3.56166e+07 0 0.128181 0.993055 0.842203 7.16078e+07 0.00287517 1.51577e+07 6.87628e+06 1.53183e+07 181 1.52812e+07 1.27469e+07 0.00243943 1.53493e+07 50.1113 0.0083651 0.995235 0 50.2635 GTEX-WRHK-0526-SM-4MVOF 1 B1 8 pieces, up to 10x2mm; good mucosa; 9.3 Esophagus Esophagus - Mucosa 0006920 239 435 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988539 349807 0.976122 0.99145 0.850607 21870 1 76 0.00226675 164 0 7.47667e+07 0.0234336 370297 7.54114e+07 6.8624e+06 21885 3.7152e+07 0 0.125515 0.99145 0.843335 7.47667e+07 0.00318057 1.66908e+07 9.99424e+06 1.6789e+07 179 1.68383e+07 1.49641e+07 0.00272232 1.68589e+07 50.0305 0.00491036 0.994362 0 50.1466 GTEX-WRHK-0626-SM-4MVOE 1 B1 6 pieces, up to 9x2mm; oxyntic mucosa with sloughed superficial layer; No muscularis propria present 6.6 Stomach Stomach 0000945 247 427 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.984358 323267 0.977325 0.987163 0.844483 22991 1 76 0.00212763 361 0 8.96383e+07 0.0218798 894771 9.0804e+07 8.41722e+06 23012 4.44966e+07 0 0.132842 0.987163 0.833642 8.96383e+07 0.00315897 2.03693e+07 7.21386e+07 2.05913e+07 282 2.06121e+07 2.10202e+07 0.00264183 2.05985e+07 49.9835 0.00985387 0.989968 0 50.2709 GTEX-WRHK-0826-SM-3MJFG 1 B1 2 pieces, 13x8 & 12x8mm; 1 piece has a 5x4mm lymph node; other has a central 4mm fixation defect 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 250 424 BP-28355 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987647 242964 0.978101 0.989918 0.841357 23666 1 76 0.00258022 378 0 1.09289e+08 0.0216328 887453 1.10403e+08 1.58298e+07 23695 5.43741e+07 0 0.136744 0.989918 0.832874 1.09289e+08 0.00483408 2.38248e+07 1.08604e+07 2.43981e+07 336 2.43667e+07 1.96373e+07 0.00370457 2.40859e+07 49.7102 0.00803833 0.992188 0 50.5944 GTEX-WRHK-1026-SM-4MVOD 1 B1 6 pieces, up to 8x3.5mm; all have abundant lymphoid tissue, BUT all have muscularis propria 7 Small Intestine Small Intestine - Terminal Ileum 0001211 265 409 BP-28357 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.985387 292697 0.96231 0.988354 0.768091 24449 1 76 0.00262592 147 0 6.87996e+07 0.0367829 313442 6.96103e+07 6.11809e+06 24478 3.41354e+07 0 0.19422 0.988354 0.759145 6.87996e+07 0.00365885 1.50533e+07 9.6042e+06 1.51442e+07 160 1.52003e+07 1.0485e+07 0.00314083 1.52005e+07 50.0004 0.00450281 0.99132 0 50.1505 GTEX-WRHK-1126-SM-4MVOJ 1 B1 6 pieces, up to 9x3mm; mainly muscle (our target) but 3 have foci of mucosa at one pole 7 Colon Colon - Sigmoid 0001159 278 396 BP-28357 RNA isolation_PAXgene Tissue miRNA 07/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988333 327966 0.976492 0.991204 0.848599 22547 1 76 0.00229763 154 0 6.44486e+07 0.0225867 457780 6.50205e+07 5.70938e+06 22565 3.19983e+07 0 0.127894 0.991204 0.841134 6.44486e+07 0.00331576 1.40861e+07 7.91636e+06 1.41876e+07 168 1.41769e+07 1.10198e+07 0.00280522 1.42756e+07 50.1735 0.00704055 0.994075 0 50.1794 GTEX-WRHK-1426-SM-3MJF9 0 B1 6 pieces, up to 11x4mm; well trimmed without subcutaneous adipose 7 Skin Skin - Sun Exposed (Lower leg) 0004264 299 375 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.971958 270567 0.969732 0.974369 0.792937 24480 1 76 0.00271309 299 0 1.02786e+08 0.030033 1.02322e+06 1.0549e+08 1.55553e+07 24511 5.11032e+07 0 0.176795 0.974369 0.772613 1.02786e+08 0.00494946 2.24068e+07 1.26141e+07 2.27226e+07 306 2.27332e+07 1.68313e+07 0.00382851 2.26284e+07 49.8845 0.00969971 0.97678 0 50.3498 GTEX-WRHK-1626-SM-3MJFH 0 B1 2 pieces, 10x10 & 10x8mm; 1 piece has 10% adipose on edge 7.3 Muscle Muscle - Skeletal 0011907 303 371 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.974206 304860 0.98086 0.976432 0.87956 21539 1 76 0.00246697 381 0 1.1434e+08 0.0189256 1.31005e+06 1.171e+08 1.80157e+07 21554 5.68832e+07 0 0.1013 0.976432 0.858831 1.1434e+08 0.00472934 2.47668e+07 1.61625e+07 2.54525e+07 343 2.54181e+07 2.279e+07 0.00359558 2.50204e+07 49.6058 0.0111874 0.978657 0 50.6827 GTEX-WRHK-1726-SM-3MJFK 0 B1 3 pieces, up to 4x3mm; no extraneous adipose 6.8 Blood Vessel Artery - Tibial 0007610 310 364 BP-28509 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987599 244170 0.974617 0.989792 0.855533 22382 1 76 0.00260866 383 0 1.19128e+08 0.0249762 669252 1.20357e+08 1.72716e+07 22408 5.92407e+07 0 0.119084 0.989792 0.8468 1.19128e+08 0.00472241 2.53879e+07 1.01847e+07 2.58804e+07 344 2.58595e+07 2.27048e+07 0.00366319 2.56513e+07 49.7979 0.00556056 0.991985 0 50.4803 GTEX-WRHU-0003-SM-3PYKC C1 Blood Whole Blood 0013756 387 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R04C02 GTEX-WRHU-0003-SM-3PZ7D C1 Blood Whole Blood 0013756 387 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660004_R02C01 GTEX-WRHU-0003-SM-4X5ZS C1 Blood Whole Blood 0013756 387 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WRHU-0003-SM-5JK4F C1 Blood Whole Blood 0013756 387 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-5036,LCSET-7729 09/08/2015 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-WRHU-0003-SM-CLTFY C1 Blood Whole Blood 0013756 387 BP-27229 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/11/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WRHU-0006-SM-3MJF6 C1 8.9 Blood Whole Blood 0013756 387 BP-27277 RNA isolation_PAXgene Blood RNA (Manual) 07/12/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.971949 1.40081e+06 0.94493 0.974171 0.689712 22026 1 76 0.00314562 142 0 9.15784e+07 0.0546778 148652 9.40065e+07 1.49494e+07 22059 4.55137e+07 0 0.255218 0.974171 0.671898 9.15784e+07 0.00540466 1.99245e+07 5.8766e+07 2.01233e+07 155 2.02046e+07 1.61576e+07 0.00427256 2.00557e+07 49.815 0.00158129 0.976393 0 50.2482 GTEX-WRHU-0008-SM-4MVPB C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 556 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.991553 593797 0.975352 0.993762 0.854269 21417 1 76 0.00192416 233 0 9.25279e+07 0.0243106 304827 9.31087e+07 7.86022e+06 21436 4.60422e+07 0 0.121083 0.993762 0.84894 9.25279e+07 0.0025888 2.05531e+07 1.57136e+07 2.07312e+07 226 2.08185e+07 2.3386e+07 0.00225574 2.06713e+07 49.8226 0.00327388 0.995971 0 50.2157 GTEX-WRHU-0226-SM-3MJFV 1 C1 2 pieces ~9x7mm moderate congestion/emphysematous changes. Reprsentative bronchiole ~1mm d. encircled, relatively well-preserved mucosal lining 8.3 Lung Lung 0008952 481 1431 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987221 338076 0.968093 0.989408 0.76627 25568 1 76 0.00300257 278 0 1.1215e+08 0.0314545 462018 1.1335e+08 1.6552e+07 25617 5.57574e+07 0 0.201823 0.989408 0.758154 1.1215e+08 0.0051543 2.46419e+07 1.13685e+07 2.49123e+07 320 2.4969e+07 1.84335e+07 0.00407606 2.48184e+07 49.8487 0.00407602 0.991595 0 50.2729 GTEX-WRHU-0326-SM-3MJFY 1 C1 2 pieces ~10x6mm, rare atrophic TDLUs, representative ones encircled 6.7 Breast Breast - Mammary Tissue 0008367 483 1429 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.980621 303423 0.969299 0.982865 0.748073 26534 1 76 0.0030571 285 0 1.20505e+08 0.0302448 521497 1.22606e+08 1.81237e+07 26593 5.98861e+07 0 0.221226 0.982865 0.735255 1.20505e+08 0.00502363 2.63609e+07 1.45484e+07 2.6756e+07 321 2.67979e+07 1.71135e+07 0.00403812 2.6574e+07 49.7902 0.00425343 0.98511 0 50.3719 GTEX-WRHU-0626-SM-3MJFI 0 C1 2 pieces ~4mm d, relatively clean specimens 7 Nerve Nerve - Tibial 0001323 497 1417 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.974645 250055 0.963258 0.977452 0.71854 25731 1 76 0.00294244 178 0 9.47768e+07 0.036455 240896 9.69631e+07 1.41935e+07 25780 4.7068e+07 0 0.244718 0.977452 0.702338 9.47768e+07 0.00527232 2.06407e+07 1.00797e+07 2.088e+07 201 2.09463e+07 1.38762e+07 0.00410404 2.08331e+07 49.8645 0.00248441 0.980259 0 50.2882 GTEX-WRHU-0726-SM-3MJFL 0 C1 2 pieces ~3mm d. Subtotal occlusive atherosis/thrombosis with recanalization, representative areas delineated 7.5 Blood Vessel Artery - Tibial 0007610 501 1414 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987486 380567 0.970942 0.989717 0.777415 24865 1 76 0.00290229 378 0 1.2319e+08 0.0287007 420162 1.24469e+08 1.92361e+07 24910 6.12336e+07 0 0.193528 0.989717 0.769421 1.2319e+08 0.00499073 2.65513e+07 1.26161e+07 2.69218e+07 331 2.69681e+07 2.13719e+07 0.00394416 2.67657e+07 49.8117 0.00337562 0.991949 0 50.3465 GTEX-WRHU-0826-SM-3MJFN 0 C1 2 pieces ~8x6mm, one with ~10-15 interstitial fat focus, delineated 8 Muscle Muscle - Skeletal 0011907 505 1410 BP-28511 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.989135 363879 0.979208 0.991177 0.859195 22281 1 76 0.00272975 272 0 1.23486e+08 0.020512 1.25411e+06 1.24585e+08 1.81295e+07 22307 6.14652e+07 0 0.120014 0.991177 0.851614 1.23486e+08 0.00476653 2.63568e+07 1.71578e+07 2.70129e+07 317 2.70291e+07 2.45656e+07 0.00374604 2.65564e+07 49.5589 0.0100663 0.993219 0 50.6147 GTEX-WRHU-0926-SM-4E3IG 1 C1 2 pieces ~8x7mm. Adherent fat/skeletal muscle/fibrous tissue in one, delineated. Multiple colloid cysts ~1mm, representative ones encircled 6.8 Thyroid Thyroid 0002046 515 1401 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.982409 779102 0.953816 0.98604 0.682 25549 1 76 0.00290443 160 0 8.91975e+07 0.0458447 397896 9.04603e+07 1.02767e+07 25603 4.42796e+07 0 0.271816 0.98604 0.672479 8.91975e+07 0.00427768 1.93365e+07 2.04739e+07 1.94184e+07 181 1.95331e+07 1.11629e+07 0.00358852 1.95482e+07 50.0194 0.00439857 0.989672 0 50.1057 GTEX-WRHU-1026-SM-4E3ID 1 C1 2 pieces ~9x6mm 7.4 Heart Heart - Atrial Appendage 0006631 518 1398 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.984991 519863 0.9687 0.988841 0.774538 22425 1 76 0.00300496 153 0 7.70728e+07 0.0308844 2.33238e+06 7.79426e+07 8.39178e+06 22450 3.82685e+07 0 0.194162 0.988841 0.765895 7.70728e+07 0.00470073 1.67055e+07 1.45441e+07 1.6735e+07 196 1.67997e+07 8.16182e+06 0.00384955 1.69242e+07 50.1846 0.0299244 0.992691 0 50.0442 GTEX-WRHU-1126-SM-4E3I1 1 C1 1 pieces ~1.5-2mm d. ~0.5-1 mm adherent fat encircles both 6.7 Blood Vessel Artery - Coronary 0001621 524 1393 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.983275 558194 0.963868 0.987252 0.759771 24391 1 76 0.00275099 200 0 9.32e+07 0.0358546 425900 9.44034e+07 1.04034e+07 24425 4.62559e+07 0 0.204096 0.987252 0.750086 9.32e+07 0.00477813 2.00341e+07 1.24172e+07 2.01519e+07 214 2.02411e+07 1.40683e+07 0.00376048 2.03084e+07 50.083 0.00451149 0.991229 0 50.1467 GTEX-WRHU-1226-SM-4E3IJ 1 C1 2 pieces~8x5mm, minimal ischemic changes. One aliquot ~5-10% fat, delineated, one edge. 6.7 Heart Heart - Left Ventricle 0006566 521 1397 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98564 492980 0.982049 0.989706 0.845427 19334 1 76 0.00350569 365 0 9.83026e+07 0.0179048 6.18452e+06 9.9325e+07 1.05182e+07 19339 4.88088e+07 0 0.136622 0.989706 0.836724 9.83026e+07 0.00506814 2.14512e+07 4.86724e+07 2.15653e+07 387 2.13237e+07 4.35901e+06 0.0042837 2.1998e+07 50.7783 0.0622655 0.993773 0 50.1327 GTEX-WRHU-1326-SM-4E3K7 1 C1 6 pieces ~7x1mm 6.4 Blood Vessel Artery - Aorta 0001496 526 1392 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.984147 572470 0.962039 0.987315 0.724018 24481 1 76 0.0028837 195 0 9.45024e+07 0.037661 284832 9.57166e+07 1.07311e+07 24535 4.6908e+07 0 0.238021 0.987315 0.714834 9.45024e+07 0.00422457 2.02392e+07 1.21577e+07 2.033e+07 209 2.03945e+07 1.33009e+07 0.00355199 2.0474e+07 50.0973 0.00297579 0.990483 0 50.112 GTEX-WRHU-2826-SM-3MJG8 0 C1 6 pieces ~6x2mm 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 571 1358 BP-28775 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.982121 346736 0.966743 0.984568 0.741485 26462 1 76 0.00303 287 0 1.13624e+08 0.0330355 324422 1.15405e+08 1.83375e+07 26515 5.64724e+07 0 0.225258 0.984568 0.730042 1.13624e+08 0.00522509 2.47712e+07 1.61047e+07 2.5082e+07 291 2.51582e+07 1.79637e+07 0.00412482 2.49605e+07 49.8028 0.00281117 0.987015 0 50.3117 GTEX-WRHU-2926-SM-4MVNQ 1 C1 6 pieces ~6x2.5mm 50% with squamous mucosa ~10-15% thickness. Focal mesonephric duct remnants in one aliquot, encircled 5.9 Vagina Vagina 0000996 575 1354 BP-28775 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.985741 226219 0.96889 0.988725 0.76806 23249 1 76 0.00253243 158 0 7.30707e+07 0.0308671 571166 7.39039e+07 6.89634e+06 23282 3.62686e+07 0 0.20083 0.988725 0.7594 7.30707e+07 0.00339437 1.59356e+07 7.72689e+06 1.60814e+07 179 1.61253e+07 9.6272e+06 0.0029621 1.61048e+07 49.9683 0.00772849 0.991709 0 50.2277 GTEX-WVJS-0003-SM-DINCI C1 Blood Whole Blood 0013756 632 BP-27476 DNA Isolation of Compromised Blood with Autopure 07/17/2012 LCSET-10373 01/13/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-WVJS-0003-SM-DLIOR C1 Blood Whole Blood 0013756 632 BP-27476 DNA Isolation of Compromised Blood with Autopure 07/17/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WVJS-0008-SM-4MVPC C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 726 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988469 623630 0.979057 0.991612 0.869068 21257 1 76 0.00192355 224 0 9.61867e+07 0.0206203 448999 9.70003e+07 8.71407e+06 21274 4.78116e+07 0 0.109989 0.991612 0.861779 9.61867e+07 0.00270099 2.15357e+07 1.39118e+07 2.17075e+07 235 2.18461e+07 2.52668e+07 0.00231104 2.16973e+07 49.8291 0.00462884 0.994756 0 50.1987 GTEX-WVJS-0126-SM-4MVOT 1 C1 6 pieces, up to 8x3mm; 3 have up to 1 mm subcutaneous adipose 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 726 1434 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988569 379105 0.969779 0.99087 0.826178 22956 1 76 0.00236307 160 0 6.85361e+07 0.030004 572477 6.91676e+07 6.0525e+06 22978 3.40623e+07 0 0.143601 0.99087 0.818635 6.85361e+07 0.00325791 1.50002e+07 1.05903e+07 1.50798e+07 174 1.5076e+07 1.08007e+07 0.00280945 1.51685e+07 50.1531 0.00827667 0.993171 0 50.1323 GTEX-WVJS-0226-SM-4MVOU 1 C1 2 pieces, 9x7 & 9x7mm; 1 with 50% fibrous tissue (tendon) 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 729 1431 BP-36182 RNA isolation_PAXgene Tissue miRNA 02/15/2013 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.985739 479517 0.970532 0.989416 0.774982 23544 1 76 0.00240616 177 0 8.16258e+07 0.02915 285516 8.24989e+07 7.65465e+06 23581 4.05146e+07 0 0.19555 0.989416 0.76678 8.16258e+07 0.00339487 1.78934e+07 1.08999e+07 1.80383e+07 187 1.81488e+07 1.36812e+07 0.00289867 1.80808e+07 49.9061 0.00346084 0.993093 0 50.2016 GTEX-WVJS-0826-SM-4MVNR 2 C1 2 pieces, 8x7 & 7x6mm; moderate vascular and interstitial fibrosis; heart failure cells 6 Lung Lung 0008952 772 1392 BP-28775 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.986821 324877 0.973888 0.989844 0.793428 24042 1 76 0.00257128 167 0 8.00555e+07 0.0257971 421782 8.08768e+07 7.23162e+06 24069 3.97314e+07 0 0.180459 0.989844 0.785371 8.00555e+07 0.00352799 1.76363e+07 8.95948e+06 1.7793e+07 192 1.7855e+07 1.28181e+07 0.00304817 1.7814e+07 49.9425 0.00521511 0.992868 0 50.2212 GTEX-WVJS-2426-SM-EZ6LI 2 C1 6 pieces, up to 8x2mm; autolyzed mucosa (3); muscle moderately autolyzed (2) 5.8 Colon Colon - Transverse 0001157 813 1378 BP-28811 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.971051 140849 0.971385 0.972535 0.833542 23258 1 76 0.00257475 217 0 8.35319e+07 0.0283198 1.81217e+06 8.58909e+07 6.56141e+06 23281 4.16014e+07 0 0.137843 0.972535 0.810648 8.35319e+07 0.00375403 1.81599e+07 1.03547e+07 1.83386e+07 252 1.83001e+07 1.39812e+07 0.00316349 1.83199e+07 50.0269 0.0210986 0.974018 0 50.2447 GTEX-WVJS-2726-SM-4MVNU 2 C1 2 pieces, 7x5 & 7x5mm; reduced spermatogenesis 6.6 Testis Testis 0000473 819 1374 BP-28811 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 EXCLUDE 0.987449 383063 0.964315 0.990102 0.759109 26204 1 76 0.00254671 159 0 7.89042e+07 0.0354897 1.90252e+06 7.96929e+07 6.55897e+06 26236 3.92e+07 0 0.205206 0.990102 0.751595 7.89042e+07 0.00343399 1.73031e+07 1.11483e+07 1.74083e+07 201 1.7441e+07 9.28216e+06 0.00298916 1.74648e+07 50.034 0.0238731 0.992756 0 50.1515 GTEX-WVLH-0001-SM-3PYKY C1 Blood Whole Blood 0013756 671 BP-27538 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R01C02 GTEX-WVLH-0001-SM-3PZ7K C1 Blood Whole Blood 0013756 671 BP-27538 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340006_R03C01 GTEX-WVLH-0001-SM-4X624 C1 Blood Whole Blood 0013756 671 BP-27538 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WVLH-0001-SM-5SOE6 C1 Blood Whole Blood 0013756 671 BP-27538 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/18/2012 LCSET-5226,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WVLH-0006-SM-3MJF7 C1 8.5 Blood Whole Blood 0013756 671 BP-27540 RNA isolation_PAXgene Blood RNA (Manual) 07/18/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.951455 677347 0.975774 0.953963 0.771613 20083 1 76 0.00267341 147 0 1.15556e+08 0.022844 324411 1.21133e+08 1.87102e+07 20097 5.74094e+07 0 0.204161 0.953963 0.73609 1.15556e+08 0.0053063 2.65825e+07 1.58196e+08 2.73725e+07 176 2.7405e+07 2.87491e+07 0.00398639 2.68456e+07 49.4844 0.00267814 0.956471 0 50.7321 GTEX-WVLH-0008-SM-4MVPD C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 765 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.990366 508666 0.981372 0.993255 0.86503 21334 1 76 0.00181709 291 0 1.07313e+08 0.018338 403503 1.08042e+08 9.24099e+06 21345 5.33836e+07 0 0.116343 0.993255 0.859195 1.07313e+08 0.00254709 2.3947e+07 1.3436e+07 2.41187e+07 287 2.42473e+07 2.6452e+07 0.00218103 2.4115e+07 49.8632 0.00373469 0.996143 0 50.1786 GTEX-WVLH-0011-R10A-SM-3MJFM C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.987947 790809 0.955077 0.990095 0.827319 25074 1 76 0.00264132 272 0 1.06124e+08 0.0442502 2.13419e+06 1.07185e+08 1.6019e+07 25100 5.27665e+07 0 0.127758 0.990095 0.819125 1.06124e+08 0.00459679 2.30016e+07 2.02119e+07 2.3252e+07 321 2.33126e+07 1.5872e+07 0.00361693 2.31573e+07 49.8329 0.0199112 0.992242 0 50.2707 GTEX-WVLH-0011-R10A-SM-CYKW4-ELUATE C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 RIP-Seq GTEX-WVLH-0011-R10A-SM-CYKW4-INPUT C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 RIP-Seq GTEX-WVLH-0011-R10A-SM-CYKW4-SUP C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 RIP-Seq GTEX-WVLH-0011-R10a-SM-AHZNZ C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 694 ChIP-Seq GTEX-WVLH-0011-R11A-SM-3MJFO C1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984839 683265 0.943558 0.987308 0.720798 24525 1 76 0.00298943 271 0 1.06057e+08 0.0558597 876229 1.0742e+08 1.63296e+07 24578 5.26666e+07 0 0.22276 0.987308 0.711649 1.06057e+08 0.00498959 2.27277e+07 1.66171e+07 2.28891e+07 277 2.3035e+07 1.49437e+07 0.00398701 2.28266e+07 49.7729 0.00815703 0.989776 0 50.1769 GTEX-WVLH-0011-R1A-SM-4MVOK C1, A1 5.9 Brain Brain - Hippocampus 0001954 694 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988756 715837 0.963267 0.991361 0.831416 24421 1 76 0.00210434 371 0 1.13837e+08 0.0364951 8.35386e+06 1.14829e+08 9.72151e+06 24447 5.65627e+07 0 0.131851 0.991361 0.824234 1.13837e+08 0.00316708 2.47451e+07 3.63768e+07 2.50319e+07 429 2.47834e+07 1.04728e+07 0.00263431 2.52559e+07 50.4721 0.0727507 0.993966 0 50.288 GTEX-WVLH-0011-R2A-SM-3MJFJ C1, A1 6.8 Brain Brain - Substantia nigra 0002038 694 BP-28281 RNA isolation_PAXgene Tissue miRNA 07/30/2012 LCSET-2269 11/19/2012 TruSeq.v1 EXCLUDE 0.986155 770843 0.956089 0.98839 0.833392 25467 1 76 0.00261774 373 0 1.20281e+08 0.043441 4.68087e+06 1.21694e+08 1.79505e+07 25496 5.98152e+07 0 0.122696 0.98839 0.823717 1.20281e+08 0.00473421 2.5977e+07 2.56972e+07 2.65711e+07 342 2.65558e+07 1.5334e+07 0.00367359 2.6238e+07 49.6989 0.0384641 0.990624 0 50.5654 GTEX-WVLH-0011-R4A-SM-3MJFS C1, A1 7.3 Brain Brain - Amygdala 0001876 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.975492 1.23994e+06 0.957519 0.977684 0.84226 26834 1 76 0.00263938 381 0 1.83265e+08 0.0420694 1.14929e+07 1.87448e+08 2.92581e+07 26879 9.1139e+07 0 0.115259 0.977684 0.823464 1.83265e+08 0.00484804 3.94632e+07 4.70296e+07 4.07876e+07 393 4.07043e+07 2.25799e+07 0.00374124 3.99002e+07 49.5012 0.0613122 0.979876 0 50.8252 GTEX-WVLH-0011-R5A-SM-3MJFW C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984906 750613 0.953924 0.987282 0.815299 25612 1 76 0.0026929 372 0 1.16304e+08 0.0457127 5.38559e+06 1.17802e+08 1.79357e+07 25647 5.78234e+07 0 0.138625 0.987282 0.804931 1.16304e+08 0.00489247 2.49034e+07 2.77333e+07 2.56816e+07 342 2.56808e+07 1.34901e+07 0.00379004 2.51548e+07 49.4826 0.0457174 0.989658 0 50.7692 GTEX-WVLH-0011-R6A-SM-3MJFZ C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.984531 633437 0.95564 0.986462 0.816022 25418 1 76 0.0026754 276 0 1.09419e+08 0.044018 4.93604e+06 1.1092e+08 1.60987e+07 25444 5.44256e+07 0 0.139618 0.986462 0.804975 1.09419e+08 0.00446979 2.36488e+07 2.14485e+07 2.41831e+07 326 2.42006e+07 1.33766e+07 0.00357084 2.38317e+07 49.6161 0.0445008 0.988394 0 50.5585 GTEX-WVLH-0011-R7A-SM-3MJFB C1, A1 7 Brain Brain - Putamen (basal ganglia) 0001874 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.98442 656313 0.961906 0.986693 0.84133 23650 1 76 0.00255853 370 0 1.06326e+08 0.0379088 9.49763e+06 1.0776e+08 1.68193e+07 23667 5.29012e+07 0 0.120576 0.986693 0.830134 1.06326e+08 0.00461931 2.26497e+07 3.53661e+07 2.40691e+07 343 2.38589e+07 8.14976e+06 0.00358655 2.30244e+07 49.11 0.0881371 0.988965 0 51.5191 GTEX-WVLH-0011-R8A-SM-3MJFC C1, A1 6 Brain Brain - Hypothalamus 0001898 694 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.985739 581563 0.961458 0.988196 0.843968 23851 1 76 0.00255244 374 0 9.61063e+07 0.0383684 7.70854e+06 9.72543e+07 1.48506e+07 23873 4.78069e+07 0 0.117489 0.988196 0.834006 9.61063e+07 0.00472446 2.07065e+07 2.75562e+07 2.18085e+07 334 2.16651e+07 8.18092e+06 0.00363575 2.10511e+07 49.2814 0.0792617 0.990652 0 51.2961 GTEX-WVLH-0226-SM-3MJG6 0 C1 2 pieces '7x7mm ~10 fibrous tissue, delineated 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 767 1058 BP-28777 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.985283 271913 0.974298 0.987772 0.799435 24937 1 76 0.00278738 277 0 1.1039e+08 0.0254307 410697 1.11756e+08 1.74171e+07 24980 5.48789e+07 0 0.174863 0.987772 0.78966 1.1039e+08 0.00499584 2.42167e+07 1.17284e+07 2.46247e+07 328 2.46753e+07 1.80663e+07 0.00388883 2.44241e+07 49.7442 0.00367494 0.99026 0 50.4177 GTEX-WVLH-0526-SM-EYYWC 0 C1 2 pieces ~3mm d. Relatively clean, focal discontinuous adherent fat ~0.5mm thick on one. 5.6 Nerve Nerve - Tibial 0001323 819 1008 BP-28777 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.98389 655229 0.967283 0.987459 0.764461 25421 1 76 0.00221551 283 0 1.03942e+08 0.0324456 270675 1.05262e+08 3.84962e+06 25475 5.16514e+07 0 0.202822 0.987459 0.754874 1.03942e+08 0.00378161 2.27183e+07 9.50587e+06 2.2929e+07 303 2.3005e+07 1.64372e+07 0.00299573 2.29902e+07 49.9839 0.00257143 0.991028 0 50.2308 GTEX-WVLH-0626-SM-3MJG7 1 C1 2 pieces ~7x6mms, few colloid cysts encircled ~1 mm d. 6.2 Thyroid Thyroid 0002046 916 911 BP-28780 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.963481 214404 0.966302 0.965987 0.751948 24767 1 76 0.00284513 165 0 8.49737e+07 0.0334273 281710 8.79657e+07 1.35419e+07 24811 4.22311e+07 0 0.214354 0.965987 0.726372 8.49737e+07 0.00482389 1.84828e+07 1.0751e+07 1.87598e+07 186 1.88073e+07 1.30969e+07 0.00383194 1.86398e+07 49.7764 0.0032025 0.968492 0 50.372 GTEX-WVLH-1426-SM-4MVNX 1 C1 6 pieces ~8x3mm, up to 50% squamous mucosa 7.4 Esophagus Esophagus - Mucosa 0006920 944 889 BP-28811 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.986496 321731 0.974735 0.989714 0.79067 22608 1 76 0.00225506 187 0 7.94194e+07 0.0250305 749267 8.02449e+07 7.19083e+06 22623 3.94252e+07 0 0.184065 0.989714 0.782537 7.94194e+07 0.00327026 1.78085e+07 1.09475e+07 1.79114e+07 204 1.8003e+07 1.15548e+07 0.00276101 1.79701e+07 49.9543 0.00933726 0.992931 0 50.144 GTEX-WVLH-1526-SM-4MVOC 1 C1 6 pieces * x 2.5mm, all muscularis 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 947 886 BP-28811 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.985015 346457 0.970414 0.988521 0.791948 23976 1 76 0.00224274 263 0 8.5356e+07 0.029389 2.00289e+06 8.63471e+07 7.74576e+06 24004 4.23654e+07 0 0.178465 0.988521 0.782858 8.5356e+07 0.0032548 1.87428e+07 1.15884e+07 1.89007e+07 260 1.89214e+07 1.00446e+07 0.00274697 1.90049e+07 50.1102 0.0231958 0.992028 0 50.2097 GTEX-WVLH-1626-SM-EXURN 1 C1 2 pieces ~9x6mm 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 949 885 BP-28811 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.975685 188602 0.975788 0.976002 0.809339 21869 1 76 0.00169139 124 0 5.10652e+07 0.0238814 204860 5.23208e+07 1.96396e+06 21887 2.54321e+07 0 0.166449 0.976002 0.789916 5.10652e+07 0.00221033 1.12413e+07 4.63947e+06 1.14299e+07 132 1.13809e+07 8.76999e+06 0.00195077 1.13116e+07 49.8474 0.00391546 0.976318 0 50.416 GTEX-WVLH-2126-SM-EYYWD 2 C1 2 pieces ~ ~8x8mm. Chronic passive congestion, mild-moderate, minimal (<10%) macrovesicular steatosis 5.6 Liver Liver 0001114 965 871 BP-28813 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982538 498244 0.975387 0.986487 0.830792 21205 1 76 0.00212781 197 0 7.58146e+07 0.0244974 1.50503e+06 7.68531e+07 2.87968e+06 21224 3.76511e+07 0 0.144595 0.986487 0.819565 7.58146e+07 0.00360469 1.66403e+07 1.07976e+07 1.69388e+07 242 1.69061e+07 9.2001e+06 0.0028633 1.6939e+07 50.0485 0.0195832 0.990436 0 50.4445 GTEX-WVLH-2626-SM-4MVNV 2 C1 2 pieces ~8x6mm. Spermatogenesis is presnet but reduced 6 Testis Testis 0000473 984 856 BP-28813 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.984537 583927 0.926912 0.988023 0.712838 34506 1 76 0.00236794 216 0 1.01807e+08 0.0727778 960500 1.03041e+08 9.60634e+06 34581 5.05607e+07 0 0.214075 0.988023 0.7043 1.01807e+08 0.00321727 2.11378e+07 1.53653e+07 2.12984e+07 247 2.14471e+07 1.52687e+07 0.00279111 2.1318e+07 49.8491 0.00932155 0.991508 0 50.1892 GTEX-WVLH-2926-SM-3MJG5 1 C1 4 pieces ~5x3mm, Purkinje cells show minimal ischemic damage 6.3 Brain Brain - Cerebellum 0002037 1015 827 BP-28815 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.979309 610011 0.939173 0.98159 0.718885 25223 1 76 0.00300363 270 0 1.04549e+08 0.0605234 1.78262e+06 1.06509e+08 1.63507e+07 25267 5.19447e+07 0 0.220287 0.98159 0.70565 1.04549e+08 0.00511391 2.22569e+07 2.59436e+07 2.26945e+07 312 2.27493e+07 1.20964e+07 0.00405632 2.24292e+07 49.6457 0.0167367 0.98387 0 50.4868 GTEX-WVLH-3026-SM-3MJG9 1 C1 4 pieces ~~4x3mm 6.8 Brain Brain - Cortex 0001870 1017 825 BP-28815 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.879937 557830 0.957361 0.881106 0.84468 24229 1 76 0.00268327 268 0 9.65004e+07 0.0422361 3.32099e+06 1.09522e+08 1.86212e+07 24244 4.79199e+07 0 0.112682 0.881106 0.744253 9.65004e+07 0.00515177 2.08297e+07 2.35343e+07 2.15087e+07 329 2.14314e+07 1.21402e+07 0.00391588 2.10132e+07 49.5074 0.0303226 0.882276 0 50.8019 GTEX-WVLH-3126-SM-3MJGA 1 C1 1 pieces ~6x6mm, adherent focus fibrous tissue encicled 6.6 Pituitary Pituitary 0000007 1018 825 BP-28815 RNA isolation_PAXgene Tissue miRNA 08/06/2012 LCSET-2269 11/19/2012 TruSeq.v1 RNASEQ 0.981713 1.10841e+06 0.936681 0.984191 0.731176 26793 1 76 0.0030517 271 0 1.09101e+08 0.0630858 885933 1.10853e+08 1.74665e+07 26842 5.42147e+07 0 0.205505 0.984191 0.719617 1.09101e+08 0.00531156 2.28548e+07 4.32596e+07 2.3326e+07 307 2.33719e+07 1.46147e+07 0.00417878 2.30811e+07 49.6871 0.00799194 0.986669 0 50.5102 GTEX-WWTW-0002-SM-4MVNH C1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 535 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.989388 645906 0.965658 0.992034 0.816461 20013 1 76 0.00227676 133 0 6.05013e+07 0.0338477 451833 6.09872e+07 5.33328e+06 20036 3.00671e+07 0 0.149197 0.992034 0.809957 6.05013e+07 0.00306319 1.33478e+07 1.11082e+07 1.34712e+07 125 1.35458e+07 1.40695e+07 0.00266893 1.34325e+07 49.7901 0.00740866 0.994679 0 50.2299 GTEX-WWTW-0008-SM-4MVPE C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 621 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.990799 517584 0.98222 0.99342 0.880577 20672 1 76 0.00189477 223 0 9.45826e+07 0.0174289 366582 9.52091e+07 8.17589e+06 20682 4.70463e+07 0 0.101643 0.99342 0.874783 9.45826e+07 0.00254145 2.13114e+07 1.09303e+07 2.1423e+07 242 2.15282e+07 2.49972e+07 0.00221726 2.14518e+07 49.9111 0.00385028 0.996041 0 50.1306 GTEX-WWTW-0426-SM-DMRPS 1 C1 2 pieces ~ 3.5mm. Adherent fat nubbin ~5x3mm on one; rim of fat ~0.5mm on the other Nerve Nerve - Tibial 0001323 673 993 BP-28816 DNA Isolation from Tissue via QIAgen Spin Column 08/06/2012 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WWTW-0426-SM-DMZ39 1 C1 2 pieces ~ 3.5mm. Adherent fat nubbin ~5x3mm on one; rim of fat ~0.5mm on the other Nerve Nerve - Tibial 0001323 673 993 BP-28816 DNA Isolation from Tissue via QIAgen Spin Column 08/06/2012 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-WWTW-0626-SM-4MVNS 2 C1 2 pieces, 8x6mm unusually badly autolyzed 6.3 Muscle Muscle - Skeletal 0011907 704 963 BP-28884 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.988717 326840 0.97665 0.991539 0.842275 21180 1 76 0.0022994 184 0 7.08769e+07 0.0231327 800267 7.14817e+07 6.41807e+06 21198 3.52141e+07 0 0.134375 0.991539 0.835148 7.08769e+07 0.00317075 1.56447e+07 8.3494e+06 1.57498e+07 181 1.57722e+07 1.21698e+07 0.00273383 1.58129e+07 50.0645 0.0111954 0.994362 0 50.1674 GTEX-WWTW-1326-SM-4MVNT 2 C1 2 pieces ~8x7mm 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 798 875 BP-28887 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.983147 278775 0.971272 0.986376 0.789114 22712 1 76 0.00242821 153 0 6.84002e+07 0.0284498 745189 6.93449e+07 6.46365e+06 22729 3.39429e+07 0 0.182157 0.986376 0.778363 6.84002e+07 0.00351403 1.495e+07 1.29228e+07 1.50838e+07 159 1.51353e+07 1.16433e+07 0.00296934 1.51221e+07 49.9781 0.0107461 0.989604 0 50.2228 GTEX-WWYW-0004-SM-3PYKH C1 Blood Whole Blood 0013756 567 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R05C02 GTEX-WWYW-0004-SM-3PZ7I C1 Blood Whole Blood 0013756 567 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660004_R03C01 GTEX-WWYW-0004-SM-3USR5 C1 Blood Whole Blood 0013756 567 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WWYW-0004-SM-5URDN C1 Blood Whole Blood 0013756 567 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WWYW-0005-SM-3NB3K C1 7.3 Blood Whole Blood 0013756 567 BP-27850 RNA isolation_PAXgene Blood RNA (Manual) 07/24/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.964251 603954 0.974606 0.969156 0.784876 19998 1 76 0.0044354 122 0 9.96333e+07 0.0242878 428700 1.02804e+08 1.89952e+07 20008 4.93649e+07 0 0.18973 0.969156 0.760667 9.96333e+07 0.00680541 2.26725e+07 1.24142e+08 2.31275e+07 148 2.32572e+07 2.32629e+07 0.00561441 2.30398e+07 49.7652 0.00417007 0.974061 0 50.4968 GTEX-WWYW-0008-SM-4MVPF C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 747 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.991217 526648 0.976261 0.992998 0.841323 21388 1 76 0.0019176 221 0 9.38158e+07 0.0233716 376865 9.44773e+07 7.47912e+06 21411 4.66971e+07 0 0.134938 0.992998 0.835432 9.38158e+07 0.0025546 2.08157e+07 1.13877e+07 2.09594e+07 248 2.10236e+07 2.12572e+07 0.00223553 2.09169e+07 49.8728 0.00398895 0.994779 0 50.172 GTEX-WWYW-0011-R10A-SM-3NB35 C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985315 820067 0.954129 0.989797 0.822957 25404 1 76 0.00378202 373 0 1.11466e+08 0.0454259 3.4503e+06 1.12615e+08 1.94605e+07 25431 5.52785e+07 0 0.131172 0.989797 0.814561 1.11466e+08 0.0055927 2.41263e+07 2.17527e+07 2.43337e+07 378 2.44326e+07 1.47368e+07 0.00468326 2.45102e+07 50.0793 0.0306381 0.99428 0 50.2139 GTEX-WWYW-0011-R10A-SM-CYKW7-ELUATE C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 RIP-Seq GTEX-WWYW-0011-R10A-SM-CYKW7-INPUT C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 RIP-Seq GTEX-WWYW-0011-R10A-SM-CYKW7-SUP C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 RIP-Seq GTEX-WWYW-0011-R10a-SM-AHZNT C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 725 ChIP-Seq GTEX-WWYW-0011-R11A-SM-3NB38 C1, A1 7.1 Brain Brain - Cerebellar Hemisphere 0002037 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985082 742083 0.944886 0.989213 0.752755 25111 1 76 0.00393697 373 0 1.19879e+08 0.054759 2.15664e+06 1.21187e+08 1.87159e+07 25148 5.94497e+07 0 0.192131 0.989213 0.744636 1.19879e+08 0.00557351 2.57059e+07 2.33541e+07 2.58822e+07 361 2.6022e+07 1.45095e+07 0.00475182 2.60329e+07 50.0105 0.017796 0.993345 0 50.1708 GTEX-WWYW-0011-R1A-SM-3TW8G C1, A1 7.8 Brain Brain - Hippocampus 0001954 725 BP-28513 RNA isolation_PAXgene Tissue miRNA 08/01/2012 LCSET-2622 01/26/2013 TruSeq.v1 RNASEQ 0.99226 627134 0.958614 0.993897 0.826614 25552 1 76 0.00249978 278 0 1.20155e+08 0.0409077 6.4238e+06 1.20893e+08 1.63342e+07 25580 5.98415e+07 0 0.132 0.993897 0.821569 1.20155e+08 0.00389564 2.6324e+07 2.35422e+07 2.65176e+07 307 2.64815e+07 1.5859e+07 0.00319656 2.65443e+07 50.0592 0.0531364 0.995535 0 50.1831 GTEX-WWYW-0011-R5A-SM-3NB3E C1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985435 1.00414e+06 0.949831 0.989524 0.803221 25866 1 76 0.0038641 373 0 1.16414e+08 0.0498109 5.37318e+06 1.17647e+08 2.01122e+07 25898 5.77495e+07 0 0.14661 0.989524 0.794806 1.16414e+08 0.00535931 2.51583e+07 3.5169e+07 2.53899e+07 348 2.54762e+07 1.40324e+07 0.00460862 2.55291e+07 50.0519 0.0456721 0.993614 0 50.2292 GTEX-WWYW-0011-R6A-SM-3NB3G C1, A1 8.3 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986012 889794 0.955184 0.990251 0.817499 25430 1 76 0.00387501 372 0 1.16116e+08 0.0443866 5.49932e+06 1.17259e+08 2.08445e+07 25456 5.76063e+07 0 0.137685 0.990251 0.80953 1.16116e+08 0.0055786 2.52051e+07 2.7343e+07 2.54016e+07 374 2.55031e+07 1.52567e+07 0.00472316 2.55638e+07 50.0594 0.0468988 0.994491 0 50.1942 GTEX-WWYW-0011-R7A-SM-3NB3H C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983548 820111 0.95785 0.988072 0.832058 25184 1 76 0.00375153 376 0 1.20226e+08 0.0418459 8.87758e+06 1.21678e+08 2.10558e+07 25209 5.96268e+07 0 0.125792 0.988072 0.822133 1.20226e+08 0.00563027 2.62204e+07 2.97908e+07 2.66441e+07 399 2.6586e+07 1.49237e+07 0.0046866 2.67882e+07 50.1894 0.0729598 0.992596 0 50.4007 GTEX-WWYW-0011-R8A-SM-3NB3S C1, A1 6.1 Brain Brain - Hypothalamus 0001898 725 BP-29430 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984195 606681 0.9646 0.988952 0.84159 24562 1 76 0.0037144 376 0 1.13345e+08 0.0351057 1.0901e+07 1.14611e+08 1.98939e+07 24594 5.62092e+07 0 0.123011 0.988952 0.832292 1.13345e+08 0.00551798 2.48959e+07 2.46001e+07 2.5361e+07 385 2.52619e+07 1.33693e+07 0.00461185 2.54834e+07 50.2183 0.0951125 0.99371 0 50.4627 GTEX-WWYW-0426-SM-3NB31 1 C1 2 pieces ~2mm d. Clean specimens 6.5 Blood Vessel Artery - Tibial 0007610 751 955 BP-28887 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98353 342341 0.973389 0.988259 0.795366 22847 1 76 0.00398175 211 0 1.03599e+08 0.0262886 814859 1.0483e+08 1.84333e+07 22879 5.1347e+07 0 0.178023 0.988259 0.786028 1.03599e+08 0.00590251 2.23424e+07 1.06959e+07 2.25566e+07 251 2.26737e+07 1.70888e+07 0.00493753 2.26946e+07 50.023 0.00777315 0.992988 0 50.2385 GTEX-WWYW-0526-SM-3NB2W 1 C1 2 pieces ~ 8x8mm, one with ~30% interstitial fatty aggregate, delineated 8.7 Muscle Muscle - Skeletal 0011907 753 953 BP-28887 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984671 429582 0.98016 0.989682 0.853437 21116 1 76 0.00369205 198 0 1.0208e+08 0.0196112 1.74142e+06 1.03144e+08 1.84999e+07 21134 5.06369e+07 0 0.126724 0.989682 0.844631 1.0208e+08 0.00568213 2.19759e+07 1.2516e+07 2.21319e+07 221 2.23003e+07 2.13994e+07 0.00468205 2.22843e+07 49.9821 0.0168834 0.994692 0 50.1768 GTEX-WWYW-0826-SM-3NB2X 2 C1 2pieces ~ 7x7mm, unusually poorly preserved 6.8 Thyroid Thyroid 0002046 810 898 BP-28889 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.982921 317977 0.969166 0.987505 0.727442 24194 1 76 0.00400176 149 0 8.46308e+07 0.0305508 693253 8.57016e+07 1.45191e+07 24237 4.19589e+07 0 0.241724 0.987505 0.718353 8.46308e+07 0.00578665 1.85841e+07 1.16619e+07 1.86972e+07 171 1.88034e+07 1.22076e+07 0.00489006 1.88514e+07 50.0638 0.00808915 0.99209 0 50.1516 GTEX-WWYW-0926-SM-3NB2Z 3 C1 2 pieces ~8x7mm, emphysemaous changes, congestion, badly autolyzed, vascular structures delineated 6.9 Lung Lung 0008952 813 896 BP-28889 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984362 524421 0.965114 0.98849 0.741712 26817 1 76 0.00440167 277 0 1.19861e+08 0.0342209 589601 1.21257e+08 2.08871e+07 26872 5.94233e+07 0 0.223402 0.98849 0.733175 1.19861e+08 0.00614552 2.61895e+07 2.01813e+07 2.64737e+07 317 2.66013e+07 1.75994e+07 0.00526995 2.65372e+07 49.9397 0.00486243 0.992618 0 50.2699 GTEX-WWYW-0926-SM-CYKVP 3 C1 2 pieces ~8x7mm, emphysemaous changes, congestion, badly autolyzed, vascular structures delineated 6.9 Lung Lung 0008952 813 896 BP-28889 RNA isolation_PAXgene Tissue miRNA 08/07/2012 RIP-Seq GTEX-WWYW-1126-SM-3NB2Q 2 C1 2 pieces '7x6mm 6.8 Heart Heart - Atrial Appendage 0006631 817 893 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.981887 309632 0.97576 0.986844 0.762727 23271 1 76 0.00396186 200 0 1.04425e+08 0.0240008 4.99221e+06 1.05817e+08 1.87442e+07 23316 5.1765e+07 0 0.213033 0.986844 0.752693 1.04425e+08 0.00595415 2.25621e+07 1.18433e+07 2.27671e+07 235 2.28843e+07 1.56589e+07 0.004953 2.29303e+07 50.0502 0.0471778 0.991802 0 50.2261 GTEX-WWYW-1326-SM-3NB2S 2 C1 2 pieces ~7x7mm, focal insterstitial fibrosis delineated. Unusually poorly preserved 6.6 Heart Heart - Left Ventricle 0006566 823 888 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985857 354813 0.979796 0.990342 0.818022 22597 1 76 0.00376396 367 0 1.16995e+08 0.0200961 9.59703e+06 1.18136e+08 2.0343e+07 22619 5.80672e+07 0 0.161774 0.990342 0.810122 1.16995e+08 0.00567123 2.60804e+07 2.48523e+07 2.61652e+07 409 2.62437e+07 9.68484e+06 0.00471328 2.64695e+07 50.2142 0.081237 0.994828 0 50.0811 GTEX-WWYW-1326-SM-CYKVO 2 C1 2 pieces ~7x7mm, focal insterstitial fibrosis delineated. Unusually poorly preserved 6.6 Heart Heart - Left Ventricle 0006566 823 888 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 RIP-Seq GTEX-WWYW-2726-SM-4MVOP 1 C1 2 pieces ~8x7mm. ~30% of each is hilum. Typical post menopausal atrophy 6.5 Ovary Ovary 0000992 851 869 BP-30995 RNA isolation_PAXgene Tissue miRNA 09/11/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.984306 1.55218e+06 0.939839 0.986936 0.73051 24410 1 76 0.00233506 290 0 1.2552e+08 0.0597632 537739 1.27181e+08 1.12522e+07 24461 6.23071e+07 0 0.209329 0.986936 0.720967 1.2552e+08 0.00332336 2.64899e+07 6.30912e+07 2.68532e+07 284 2.6895e+07 2.365e+07 0.00282789 2.68353e+07 49.9444 0.00422813 0.989567 0 50.3405 GTEX-WWYW-2826-SM-4MVOQ 2 C1 2 pieces ~10x6mm, no endometrial elements present 6.1 Uterus Uterus 0000995 853 868 BP-30995 RNA isolation_PAXgene Tissue miRNA 09/11/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.985501 632580 0.952319 0.98871 0.711366 22583 1 76 0.00241244 149 0 7.23231e+07 0.0474449 336445 7.31489e+07 6.57099e+06 22611 3.58951e+07 0 0.240952 0.98871 0.703335 7.23231e+07 0.00353095 1.56448e+07 2.34837e+07 1.582e+07 158 1.58995e+07 1.03447e+07 0.00296988 1.58131e+07 49.8638 0.00459945 0.99192 0 50.2784 GTEX-WWYW-3026-SM-3NB36 1 C1 4 pieces ~4x4mm. Reasonably well preserved, Purkinje cells show signs of antemortem ischemia (nuclear smudging) 6.3 Brain Brain - Cerebellum 0002037 872 850 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.979419 1.14506e+06 0.931187 0.983989 0.710269 25703 1 76 0.00420167 372 0 1.16082e+08 0.0685132 2.22062e+06 1.1797e+08 2.04577e+07 25755 5.75256e+07 0 0.220918 0.983989 0.698898 1.16082e+08 0.00603601 2.45908e+07 4.25559e+07 2.48297e+07 338 2.49664e+07 1.29568e+07 0.00511458 2.49772e+07 50.0108 0.0188236 0.98856 0 50.2417 GTEX-WWYW-3126-SM-3NB39 1 C1 4 pieces ~4x4mm 6.8 Brain Brain - Cortex 0001870 874 848 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986067 767750 0.957695 0.990498 0.840786 24565 1 76 0.00388612 371 0 1.09685e+08 0.0418814 5.09852e+06 1.10737e+08 1.95717e+07 24584 5.44298e+07 0 0.116909 0.990498 0.832797 1.09685e+08 0.00583143 2.39046e+07 2.75891e+07 2.41379e+07 380 2.42071e+07 1.43132e+07 0.00485442 2.42995e+07 50.0953 0.0460415 0.994928 0 50.2428 GTEX-WWYW-3226-SM-3NB3B 2 C1 2 piece ~5x5 mm. Mixed adeno/neurohypophysis, mixed in dural elements (vessels) 6.6 Pituitary Pituitary 0000007 873 850 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.967834 417106 0.960932 0.972118 0.760312 25162 1 76 0.00450134 204 0 9.98448e+07 0.0385278 875917 1.02708e+08 1.87802e+07 25204 4.93884e+07 0 0.20062 0.972118 0.739113 9.98448e+07 0.00568019 2.16386e+07 2.16791e+07 2.16972e+07 241 2.2048e+07 1.44138e+07 0.00508817 2.17087e+07 49.6122 0.00852818 0.976402 0 50.0676 GTEX-WXYG-0001-SM-3PYKG B1 Blood Whole Blood 0013756 -231 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R03C01 GTEX-WXYG-0001-SM-3PZ82 B1 Blood Whole Blood 0013756 -231 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340002_R03C01 GTEX-WXYG-0001-SM-4X625 B1 Blood Whole Blood 0013756 -231 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 LCSET-4101 11/11/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WXYG-0001-SM-5SOE5 B1 Blood Whole Blood 0013756 -231 BP-27705 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/23/2012 LCSET-5226,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WXYG-0004-SM-4MVOS B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -231 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3652 08/10/2013 TruSeq.v1 RNASEQ 0.990046 646944 0.967321 0.992324 0.810747 21097 1 76 0.00241177 178 0 8.35772e+07 0.0322631 416104 8.42237e+07 7.50814e+06 21120 4.15664e+07 0 0.156574 0.992324 0.804524 8.35772e+07 0.00307465 1.84961e+07 1.48238e+07 1.86101e+07 174 1.87141e+07 1.90595e+07 0.00274245 1.85801e+07 49.8203 0.00494046 0.994602 0 50.1536 GTEX-WXYG-0005-SM-3NB3M B1 7.9 Blood Whole Blood 0013756 -231 BP-27850 RNA isolation_PAXgene Blood RNA (Manual) 07/24/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.981324 1.78379e+06 0.92892 0.986363 0.764592 21040 1 76 0.00456786 165 0 1.06394e+08 0.0705544 421323 1.07865e+08 1.93431e+07 21070 5.27379e+07 0 0.164328 0.986363 0.754166 1.06394e+08 0.00662388 2.23842e+07 8.18216e+07 2.27054e+07 192 2.28611e+07 1.98065e+07 0.00559062 2.27785e+07 49.9096 0.00390604 0.991402 0 50.3562 GTEX-WXYG-0008-SM-4ONDU B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 212 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.992275 504079 0.980481 0.994105 0.876034 20077 1 76 0.0017046 154 0 7.4635e+07 0.0192053 245907 7.50776e+07 4.82931e+06 20089 3.71619e+07 0 0.104448 0.994105 0.870869 7.4635e+07 0.00245544 1.68152e+07 1.00339e+07 1.69249e+07 158 1.69832e+07 1.99285e+07 0.00207933 1.68935e+07 49.8676 0.00327537 0.995935 0 50.1624 GTEX-WXYG-0126-SM-4OND7 1 B1 2 pieces, 8x8 & 9x8mm; well preserved 6.9 Spleen Spleen 0002106 118 672 BP-28887 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988611 375365 0.961103 0.990524 0.775699 23441 1 76 0.00278204 139 0 6.58603e+07 0.037123 487834 6.64904e+07 4.39058e+06 23467 3.26981e+07 0 0.185404 0.990524 0.768349 6.58603e+07 0.00388217 1.446e+07 1.05409e+07 1.4556e+07 154 1.45641e+07 9.10052e+06 0.00333105 1.45768e+07 50.0218 0.00733691 0.992436 0 50.1653 GTEX-WXYG-0226-SM-3NB2Y 1 B1 2 pieces, 10x8 & 10x8mm; one has nubbine of fat/vascular tissue up to~1.5mm thick 7.8 Thyroid Thyroid 0002046 122 669 BP-28887 RNA isolation_PAXgene Tissue miRNA 08/07/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.97969 435226 0.960674 0.983721 0.755307 26028 1 76 0.00427926 276 0 1.1521e+08 0.0387591 236431 1.17117e+08 2.02894e+07 26088 5.71036e+07 0 0.205367 0.983721 0.743011 1.1521e+08 0.00545096 2.50151e+07 1.74176e+07 2.51305e+07 279 2.53665e+07 1.77452e+07 0.00486271 2.52151e+07 49.8503 0.00201876 0.987752 0 50.115 GTEX-WXYG-0826-SM-4ONC7 1 B1 2 pieces, 14x11 & 8x6mm; wlle preserved with areas of fibrosis. Islets well seen/preserved, representative ones delineated 8.1 Pancreas Pancreas 0001150 154 641 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.98916 328819 0.975344 0.99154 0.824047 22686 1 76 0.00208342 112 0 6.46387e+07 0.0243888 174891 6.51902e+07 4.42636e+06 22707 3.21454e+07 0 0.151297 0.99154 0.817076 6.46387e+07 0.00319013 1.46924e+07 1.49828e+07 1.487e+07 117 1.48896e+07 1.67085e+07 0.00263545 1.48281e+07 49.8965 0.00268278 0.99392 0 50.3003 GTEX-WXYG-0926-SM-3NB2O 1 B1 2 pieces, 7x4 & 5x4mm; 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 156 639 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983512 394207 0.971018 0.988686 0.818314 24791 1 76 0.00420959 374 0 1.16712e+08 0.0287245 648280 1.18048e+08 2.17779e+07 24823 5.78607e+07 0 0.152704 0.988686 0.809056 1.16712e+08 0.00615239 2.53441e+07 1.48718e+07 2.56891e+07 363 2.5719e+07 1.78892e+07 0.0051759 2.58797e+07 50.1557 0.00549168 0.993861 0 50.3381 GTEX-WXYG-1026-SM-4ONCD 1 B1 6 pieces, up to 7x3mm all muscularis, good specimens 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 158 638 BP-28992 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.99134 399004 0.974552 0.99333 0.821596 21739 1 76 0.00196444 162 0 7.19646e+07 0.0251368 310903 7.24478e+07 4.61036e+06 21762 3.58089e+07 0 0.152957 0.99333 0.816116 7.19646e+07 0.00288287 1.55466e+07 6.11331e+06 1.57083e+07 170 1.56791e+07 1.26958e+07 0.00242273 1.57182e+07 50.0623 0.00429141 0.99532 0 50.2587 GTEX-WXYG-1126-SM-4ONCH 1 B1 6 pieces, up to 7x5mm; all muscularis; good specimens 9.4 Esophagus Esophagus - Muscularis 0004648 161 636 BP-28995 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991473 396265 0.975888 0.993518 0.83609 21239 1 76 0.00193498 172 0 7.11217e+07 0.0237635 283917 7.15856e+07 4.71274e+06 21252 3.53932e+07 0 0.139798 0.993518 0.830671 7.11217e+07 0.00281288 1.52763e+07 6.53968e+06 1.54339e+07 166 1.54162e+07 1.3397e+07 0.00237302 1.54367e+07 50.0333 0.00396612 0.995564 0 50.2565 GTEX-WXYG-1226-SM-4ONCJ 1 B1 4 pieces, up to 6x3mm; ~10% squamous mucosa by thickness 9.5 Esophagus Esophagus - Mucosa 0006920 164 634 BP-28995 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988839 308191 0.976928 0.990771 0.837128 21328 1 76 0.00217945 148 0 6.74888e+07 0.0226877 233387 6.81175e+07 4.66578e+06 21342 3.35992e+07 0 0.1398 0.990771 0.829401 6.74888e+07 0.00298412 1.51905e+07 1.05947e+07 1.53312e+07 153 1.53498e+07 1.35974e+07 0.002581 1.52994e+07 49.9178 0.00342624 0.992702 0 50.2306 GTEX-WXYG-1326-SM-4ONCN 1 B1 2 pieces, 7x7 & 10x8mm; no endoemtrium, all muscle 7.4 Uterus Uterus 0000995 172 626 BP-28995 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991984 411435 0.972114 0.993694 0.830227 21629 1 76 0.00192889 151 0 6.70783e+07 0.0275404 164338 6.75039e+07 4.30059e+06 21649 3.33753e+07 0 0.141888 0.993694 0.824991 6.70783e+07 0.00283736 1.45368e+07 6.22004e+06 1.46627e+07 158 1.46141e+07 1.25628e+07 0.00238235 1.47045e+07 50.1542 0.0024345 0.995404 0 50.2156 GTEX-WXYG-1426-SM-4ONCK 1 B1 2 pieces, 9x7 & 9x7mm; post menopausal atrophy 7.3 Ovary Ovary 0000992 179 620 BP-28997 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990127 626023 0.96685 0.991823 0.777647 25366 1 76 0.00204013 379 0 1.31972e+08 0.032887 332734 1.3306e+08 8.73375e+06 25420 6.5723e+07 0 0.189203 0.991823 0.771289 1.31972e+08 0.00281416 2.88713e+07 1.87601e+07 2.91824e+07 353 2.91577e+07 2.19195e+07 0.00242649 2.91208e+07 49.9683 0.00250063 0.993519 0 50.268 GTEX-WXYG-1626-SM-4ONCR 1 B1 6 pieces, up to 8x4mm; mucosa well-preserved; 30-40% of thickness, representatively delineated 6.8 Stomach Stomach 0000945 190 609 BP-28997 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.987841 244956 0.977753 0.990181 0.826888 21575 1 76 0.00239955 217 0 6.13868e+07 0.0216873 911750 6.19955e+07 4.13938e+06 21588 3.05129e+07 0 0.150866 0.990181 0.818768 6.13868e+07 0.00334713 1.3832e+07 3.66051e+07 1.39251e+07 173 1.39048e+07 1.15463e+07 0.00287222 1.3994e+07 50.1599 0.0147067 0.992521 0 50.1677 GTEX-WXYG-1726-SM-4ONCU 1 B1 6 pieces, up to 7x3mm; all muscularis, good specimens 5.8 Colon Colon - Sigmoid 0001159 193 607 BP-28997 RNA isolation_PAXgene Tissue miRNA 08/08/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990031 362548 0.971376 0.992036 0.824868 22022 1 76 0.00205429 158 0 7.09206e+07 0.0284359 500850 7.149e+07 4.65944e+06 22043 3.5287e+07 0 0.146508 0.992036 0.818298 7.09206e+07 0.00307258 1.51822e+07 7.69555e+06 1.53393e+07 179 1.52449e+07 1.08557e+07 0.00256241 1.5415e+07 50.2774 0.00700587 0.99404 0 50.2574 GTEX-WXYG-2026-SM-4E3IY 0 B1 6 pieces, up to 9x4mm; 7.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 203 599 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987797 766079 0.967 0.990825 0.839848 23490 1 76 0.00280012 230 0 9.39616e+07 0.0327682 442483 9.48316e+07 1.04652e+07 23512 4.67094e+07 0 0.127152 0.990825 0.832143 9.39616e+07 0.00413249 2.0403e+07 1.90748e+07 2.05059e+07 247 2.05114e+07 1.64536e+07 0.00346427 2.0694e+07 50.2216 0.00466599 0.993854 0 50.1258 GTEX-WXYG-2226-SM-4E3IM 1 B1 2 pieces, 8x7 & 9x8mm; atrophic mammary lobules noted (rare), delineated representatively 7.7 Breast Breast - Mammary Tissue 0008367 209 594 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987306 707867 0.965325 0.990693 0.790222 24912 1 76 0.00282169 208 0 9.32274e+07 0.0339565 266582 9.41032e+07 1.01508e+07 24948 4.62994e+07 0 0.175103 0.990693 0.782867 9.32274e+07 0.00459862 2.03421e+07 1.43455e+07 2.04191e+07 212 2.05032e+07 1.59947e+07 0.00370712 2.05704e+07 50.0817 0.00283287 0.99408 0 50.0944 GTEX-WXYG-2326-SM-4E3I6 0 B1 6 pieces, up to 5.5x3mm; Squamous epithelium ~2% thicknesss 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 213 591 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985632 714624 0.96994 0.98821 0.842553 23319 1 76 0.00272305 239 0 9.44371e+07 0.0297824 395184 9.55637e+07 9.75234e+06 23348 4.69624e+07 0 0.127387 0.98821 0.83262 9.44371e+07 0.00398668 2.05725e+07 1.57153e+07 2.06247e+07 237 2.06411e+07 1.74959e+07 0.00335322 2.08031e+07 50.1954 0.00413529 0.990789 0 50.0634 GTEX-WXYG-2526-SM-3NB3F 0 B1 2 pieces, 9x6 & 14x6mm; minimal interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 223 582 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984972 316520 0.978091 0.989671 0.884009 20547 1 76 0.00400682 278 0 1.0486e+08 0.0217529 1.13901e+06 1.05954e+08 1.89488e+07 20558 5.2032e+07 0 0.0940823 0.989671 0.874878 1.0486e+08 0.00588737 2.27221e+07 1.41608e+07 2.30309e+07 275 2.30498e+07 2.08173e+07 0.00494263 2.3152e+07 50.1106 0.0107501 0.99437 0 50.3375 GTEX-WXYG-2626-SM-EVYAI 0 B1 2 pieces, 4x4 & 3.5x3mm; Imm nubbin adheren fat on one, otherwise clean 5.5 Nerve Nerve - Tibial 0001323 226 580 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.991925 132597 0.966893 0.992348 0.73936 22944 1 76 0.00214378 124 0 5.51278e+07 0.0328065 199469 5.55529e+07 2.44759e+06 22975 2.7488e+07 0 0.227533 0.992348 0.733703 5.51278e+07 0.00292758 1.21259e+07 4.38937e+06 1.22047e+07 120 1.21769e+07 8.55714e+06 0.00253551 1.21745e+07 49.9951 0.00359061 0.992771 0 50.1619 GTEX-WXYG-2726-SM-EZ6KR 0 B1 2 pieces, 3x2 & 3x2mm; clean specimen 5.8 Blood Vessel Artery - Tibial 0007610 228 579 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990681 385016 0.974438 0.992262 0.824969 22708 1 76 0.00261551 279 0 1.11813e+08 0.0252026 462814 1.12685e+08 8.896e+06 22740 5.57001e+07 0 0.149469 0.992262 0.818585 1.11813e+08 0.00370428 2.40768e+07 8.7526e+06 2.42163e+07 320 2.41877e+07 2.08233e+07 0.00315903 2.42677e+07 50.0826 0.00410716 0.993842 0 50.1444 GTEX-WY7C-0002-SM-3PYKE B1 Blood Whole Blood 0013756 -115 BP-27930 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R05C02 GTEX-WY7C-0002-SM-3PZ81 B1 Blood Whole Blood 0013756 -115 BP-27930 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340001_R03C01 GTEX-WY7C-0002-SM-3USRD B1 Blood Whole Blood 0013756 -115 BP-27930 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-WY7C-0002-SM-5URBW B1 Blood Whole Blood 0013756 -115 BP-27930 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2012 LCSET-5270,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-WY7C-0002-SM-7FG6L B1 Blood Whole Blood 0013756 -115 BP-27930 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/25/2012 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WY7C-0004-SM-4ONDS B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -115 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991244 604622 0.96424 0.993191 0.808641 21205 1 76 0.00200846 150 0 7.06496e+07 0.0352738 511749 7.1134e+07 4.58046e+06 21232 3.51555e+07 0 0.1556 0.993191 0.803134 7.06496e+07 0.00277478 1.55735e+07 1.22761e+07 1.57091e+07 149 1.577e+07 1.5974e+07 0.00239087 1.56529e+07 49.8136 0.00719415 0.995138 0 50.2166 GTEX-WY7C-0006-SM-3NB3L B1 8.3 Blood Whole Blood 0013756 -115 BP-27850 RNA isolation_PAXgene Blood RNA (Manual) 07/24/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.981024 1.43803e+06 0.953215 0.98538 0.810625 20370 1 76 0.00416351 164 0 1.14249e+08 0.045908 873298 1.15944e+08 2.06557e+07 20380 5.66816e+07 0 0.142589 0.98538 0.798774 1.14249e+08 0.00616209 2.52245e+07 1.18566e+08 2.56731e+07 202 2.57782e+07 2.61785e+07 0.00515838 2.56212e+07 49.8473 0.00753209 0.989737 0 50.4407 GTEX-WY7C-0008-SM-4ONDW B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 234 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.992159 394396 0.977002 0.993704 0.858087 20113 1 76 0.00158995 142 0 6.35373e+07 0.022677 250594 6.39399e+07 4.15647e+06 20126 3.16484e+07 0 0.118915 0.993704 0.852685 6.35373e+07 0.00225542 1.41963e+07 8.91655e+06 1.42804e+07 139 1.43145e+07 1.60514e+07 0.00192217 1.42639e+07 49.9115 0.00391921 0.995249 0 50.1476 GTEX-WY7C-0126-SM-4ONCO 1 B1 2 pieces ~8x7mm, Reasonably well-preserved 6.1 Spleen Spleen 0002106 161 905 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.984908 429857 0.966564 0.987455 0.820172 23227 1 76 0.00261799 191 0 8.06805e+07 0.03143 807291 8.17055e+07 5.6819e+06 23247 4.00289e+07 0 0.146392 0.987455 0.809883 8.06805e+07 0.00363862 1.77916e+07 1.34029e+07 1.7933e+07 207 1.79692e+07 1.26825e+07 0.00312699 1.79608e+07 49.9884 0.0098805 0.990002 0 50.1979 GTEX-WY7C-0226-SM-3NB37 1 B1 2pieces ~8x7mm. Regressive/fibrotic features 7.5 Thyroid Thyroid 0002046 168 898 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985773 434332 0.968303 0.990157 0.774623 25653 1 76 0.00378499 376 0 1.22639e+08 0.0314023 740844 1.23858e+08 2.15601e+07 25705 6.08569e+07 0 0.19368 0.990157 0.766998 1.22639e+08 0.00563429 2.68224e+07 1.37154e+07 2.70856e+07 360 2.71932e+07 1.93479e+07 0.00470555 2.72166e+07 50.0215 0.00598139 0.994541 0 50.2441 GTEX-WY7C-0326-SM-4OND5 1 B1 2 pieces ~9x9mm, all cortex, reasonabley well preserved, minimal adherent fat 9 Adrenal Gland Adrenal Gland 0002369 169 898 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991653 337084 0.976441 0.993757 0.842268 21638 1 76 0.00170756 160 0 7.29033e+07 0.0231945 1.46045e+06 7.33614e+07 4.92295e+06 21654 3.62876e+07 0 0.134173 0.993757 0.837009 7.29033e+07 0.0024206 1.6034e+07 1.03975e+07 1.62247e+07 198 1.61836e+07 1.2316e+07 0.00206333 1.62182e+07 50.0534 0.0199076 0.99586 0 50.2956 GTEX-WY7C-0426-SM-3NB3C 1 B1 2 pieces ~9x6mm, diffuse emphysematous changes 8.5 Lung Lung 0008952 173 895 BP-29321 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986077 496849 0.972684 0.990263 0.832925 25404 1 76 0.00411513 277 0 1.13287e+08 0.0262556 526506 1.14401e+08 1.99228e+07 25437 5.61874e+07 0 0.139759 0.990263 0.824815 1.13287e+08 0.00595434 2.49665e+07 1.45036e+07 2.52785e+07 330 2.54037e+07 2.06979e+07 0.00503085 2.52967e+07 49.8945 0.00460228 0.994448 0 50.3105 GTEX-WY7C-0526-SM-3NB3D 1 B1 2 pieces ~8x7mm, minimal evident fibrosis 8.4 Heart Heart - Left Ventricle 0006566 176 892 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.987813 504215 0.981756 0.991747 0.883525 21546 1 76 0.00355997 371 0 1.14779e+08 0.017999 2.09875e+06 1.15734e+08 1.96506e+07 21556 5.70036e+07 0 0.0982305 0.991747 0.876233 1.14779e+08 0.00514696 2.50406e+07 1.98263e+07 2.52163e+07 349 2.52068e+07 1.97475e+07 0.00435032 2.54612e+07 50.2511 0.0181342 0.995681 0 50.1748 GTEX-WY7C-0626-SM-4ONCT 1 B1 6 pieces ~8x2mm, ~25% thickness is adventitial fat/vasa vasorum 8.4 Blood Vessel Artery - Aorta 0001496 178 891 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989563 323885 0.977232 0.991946 0.862412 21966 1 76 0.00174826 160 0 7.14363e+07 0.0223368 266736 7.20164e+07 4.9034e+06 21980 3.55253e+07 0 0.11482 0.991946 0.855466 7.14363e+07 0.00269633 1.5617e+07 5.70866e+06 1.57021e+07 178 1.57252e+07 1.41653e+07 0.00222116 1.57642e+07 50.0619 0.00370382 0.994328 0 50.136 GTEX-WY7C-0726-SM-4ONCB 1 B1 2 pieces ~9x7mm, 90% macrovesicular steatosis but reasonably well preserved 9.5 Liver Liver 0001114 180 889 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.992345 454652 0.979659 0.9941 0.863078 20318 1 76 0.00172374 148 0 7.42843e+07 0.0200127 396193 7.47251e+07 4.54644e+06 20332 3.69764e+07 0 0.116581 0.9941 0.857986 7.42843e+07 0.00259842 1.61793e+07 1.18138e+07 1.6316e+07 173 1.62744e+07 1.58372e+07 0.0021603 1.63495e+07 50.115 0.00530201 0.995856 0 50.2102 GTEX-WY7C-0826-SM-4ONCG 1 B1 6 pieces ~7x3mm, 60% muscularis overall, adherent fibroadipose nubbins 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 185 885 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991313 456828 0.977156 0.993281 0.848578 21866 1 76 0.00167846 175 0 7.52492e+07 0.0225153 489805 7.57583e+07 4.89528e+06 21876 3.74394e+07 0 0.128578 0.993281 0.842876 7.52492e+07 0.00260933 1.63789e+07 7.4458e+06 1.65266e+07 201 1.64913e+07 1.33556e+07 0.00214298 1.6562e+07 50.107 0.00646536 0.995248 0 50.2245 GTEX-WY7C-0926-SM-3NB34 1 B1 2 pieces ~9x6mm 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 186 885 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98504 389719 0.975141 0.989638 0.833099 24338 1 76 0.00378018 273 0 1.03117e+08 0.024565 891383 1.04196e+08 1.82203e+07 24372 5.116e+07 0 0.142042 0.989638 0.824467 1.03117e+08 0.00573982 2.26831e+07 1.32123e+07 2.2873e+07 291 2.29199e+07 1.70824e+07 0.00475545 2.30864e+07 50.181 0.00855483 0.994236 0 50.2084 GTEX-WY7C-1026-SM-4OND3 1 B1 2 pieces ~8x7mm, well preserved , miniaml adherhent fat delineated, Islets not prominent 8 Pancreas Pancreas 0001150 187 884 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.99161 420439 0.97739 0.993331 0.858803 21438 1 76 0.00183276 137 0 7.50814e+07 0.0224146 205486 7.55855e+07 4.92766e+06 21452 3.73817e+07 0 0.118587 0.993331 0.853076 7.50814e+07 0.00263001 1.70645e+07 1.44047e+07 1.71172e+07 147 1.71921e+07 1.94685e+07 0.00223069 1.71362e+07 49.9186 0.00271859 0.995052 0 50.077 GTEX-WY7C-1126-SM-3NB3A 1 B1 2 pieces ~9x4mm 9.1 Heart Heart - Atrial Appendage 0006631 190 882 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.98659 502575 0.973342 0.99095 0.838424 23118 1 76 0.00357829 268 0 1.03409e+08 0.0263375 1.19234e+06 1.04353e+08 1.84531e+07 23138 5.13241e+07 0 0.134918 0.99095 0.830836 1.03409e+08 0.00522407 2.21359e+07 1.51039e+07 2.22911e+07 318 2.23119e+07 1.80949e+07 0.00439756 2.25286e+07 50.2416 0.011426 0.99531 0 50.1747 GTEX-WY7C-1326-SM-4ONCX 1 B1 6 pieces ~8x4mm, all muscularis, good specimens 9.1 Esophagus Esophagus - Muscularis 0004648 195 880 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991271 406141 0.974554 0.993149 0.849877 20893 1 76 0.0016768 142 0 6.6793e+07 0.0251167 373913 6.72538e+07 4.34952e+06 20905 3.32565e+07 0 0.124677 0.993149 0.844054 6.6793e+07 0.00243991 1.43572e+07 8.91269e+06 1.45542e+07 165 1.45244e+07 1.27291e+07 0.00205764 1.45145e+07 49.983 0.00555973 0.995026 0 50.3408 GTEX-WY7C-1426-SM-4OND1 1 B1 3 pieces, well preserved ~2.5mm d., one with ~2.5mm adherent fibrous nubbin 8.9 Salivary Gland Minor Salivary Gland 0006330 198 878 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989459 480008 0.974187 0.991727 0.817454 23758 1 76 0.00203663 163 0 7.58281e+07 0.0247283 236474 7.64606e+07 5.02963e+06 23779 3.7692e+07 0 0.156732 0.991727 0.810692 7.58281e+07 0.00290923 1.68151e+07 8.75513e+06 1.69523e+07 174 1.70241e+07 1.4609e+07 0.00247193 1.69125e+07 49.8355 0.00309276 0.993995 0 50.2032 GTEX-WY7C-1526-SM-4OND2 1 B1 2 ~3.5mm d. pieces ~60% occlusive atherosclerosis 8.7 Blood Vessel Artery - Coronary 0001621 199 878 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990028 625023 0.973298 0.992777 0.851903 21484 1 76 0.00172978 146 0 6.71065e+07 0.0262801 255945 6.75948e+07 4.53964e+06 21492 3.33493e+07 0 0.121395 0.992777 0.84575 6.71065e+07 0.00286164 1.44435e+07 7.61211e+06 1.4562e+07 159 1.45764e+07 1.36306e+07 0.00229414 1.46201e+07 50.0748 0.00378646 0.995525 0 50.2043 GTEX-WY7C-1626-SM-4ONC8 2 B1 ~6x3mm 6 pieces ~10% mucosa, moderately well preserved 8.5 Colon Colon - Transverse 0001157 204 874 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991504 443019 0.976166 0.993507 0.838088 21537 1 76 0.00169119 148 0 6.5045e+07 0.0235153 420757 6.54701e+07 4.34478e+06 21551 3.23474e+07 0 0.138078 0.993507 0.832646 6.5045e+07 0.00270772 1.41182e+07 6.10187e+06 1.42707e+07 165 1.42578e+07 1.15327e+07 0.00219843 1.42602e+07 50.0042 0.00642671 0.99551 0 50.2685 GTEX-WY7C-1726-SM-4ONCC 1 B1 6 pieces ~8x2mm ~50% mucosa, reasonably well preserved 7.9 Stomach Stomach 0000945 208 871 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988809 379523 0.978691 0.990964 0.835527 22987 1 76 0.00180394 269 0 8.75143e+07 0.0207387 474290 8.83123e+07 6.00467e+06 23007 4.35297e+07 0 0.143164 0.990964 0.827977 8.75143e+07 0.00271417 1.97905e+07 4.69887e+07 2.00996e+07 227 2.01405e+07 2.037e+07 0.00225806 1.99377e+07 49.747 0.0053706 0.993119 0 50.3875 GTEX-WY7C-1826-SM-4ONCE 2 B1 4 pieces ~6x3mm, all mucosa,correctly collected but minimal lymphoid elements 8.8 Small Intestine Small Intestine - Terminal Ileum 0001211 210 869 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989131 415426 0.975146 0.9913 0.825524 22794 1 76 0.00216749 179 0 7.23755e+07 0.0239255 632398 7.30107e+07 4.61683e+06 22818 3.59865e+07 0 0.149621 0.9913 0.818342 7.23755e+07 0.00310964 1.61322e+07 9.84161e+06 1.6277e+07 173 1.63098e+07 1.33849e+07 0.00263754 1.62496e+07 49.9076 0.00866171 0.99347 0 50.2234 GTEX-WY7C-1926-SM-4ONCI 1 B1 6 pieces ~6x4mm, all muscularis, good specimens 8.3 Colon Colon - Sigmoid 0001159 214 866 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990524 358172 0.971774 0.992354 0.826018 21708 1 76 0.00173801 145 0 6.84256e+07 0.0279634 395488 6.89528e+07 4.44088e+06 21722 3.40498e+07 0 0.145756 0.992354 0.819702 6.84256e+07 0.00273747 1.46675e+07 6.98498e+06 1.4755e+07 158 1.47163e+07 1.32604e+07 0.00223682 1.48321e+07 50.1959 0.00573564 0.994184 0 50.1488 GTEX-WY7C-2026-SM-4ONCM 1 B1 2 pieces ~9x6mm. Glands reasonably well preserved, hyperplastic foci 6.7 Prostate Prostate 0002367 216 864 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.987422 368179 0.959906 0.989375 0.731704 24754 1 76 0.0020034 141 0 6.63729e+07 0.0398691 467722 6.70856e+07 4.35825e+06 24784 3.30108e+07 0 0.228202 0.989375 0.72393 6.63729e+07 0.00300016 1.44495e+07 8.74399e+06 1.45415e+07 157 1.45471e+07 8.53054e+06 0.00250079 1.45762e+07 50.0499 0.00697202 0.991329 0 50.1587 GTEX-WY7C-2126-SM-3NB2R 1 B1 6 pieces ~9x3, squamous epithelium is ~1.5-2% thickness 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 221 860 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984286 535858 0.965817 0.988293 0.794163 25407 1 76 0.00386087 389 0 1.12197e+08 0.033947 900284 1.13526e+08 1.8829e+07 25444 5.57036e+07 0 0.171654 0.988293 0.784866 1.12197e+08 0.00553854 2.4449e+07 1.87773e+07 2.45609e+07 345 2.46232e+07 1.80109e+07 0.0046963 2.4819e+07 50.198 0.00793017 0.9923 0 50.1141 GTEX-WY7C-2226-SM-4ONCS 1 B1 2 pieces ~9x6mm 7.9 Testis Testis 0000473 229 853 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989381 451976 0.948859 0.992004 0.74138 29405 1 76 0.00195264 136 0 7.25237e+07 0.0508786 1.22122e+06 7.31083e+07 4.75026e+06 29451 3.60622e+07 0 0.207479 0.992004 0.735452 7.25237e+07 0.00284796 1.56934e+07 9.21808e+06 1.57581e+07 163 1.58265e+07 1.0633e+07 0.00239912 1.58039e+07 49.9643 0.0167043 0.994627 0 50.1029 GTEX-WY7C-2326-SM-3NB2U 1 B1 6 pieces ~8x3.5mm. Squamous epithelium is ~ 2% of thickness 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 235 848 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983725 801484 0.959566 0.988594 0.79256 25308 1 76 0.00396929 273 0 1.04023e+08 0.04022 708409 1.05223e+08 1.81633e+07 25347 5.15819e+07 0 0.167005 0.988594 0.78352 1.04023e+08 0.00591727 2.24503e+07 2.22022e+07 2.26751e+07 260 2.27646e+07 1.62472e+07 0.00493848 2.28613e+07 50.1061 0.00673247 0.993464 0 50.249 GTEX-WY7C-2426-SM-3NB2V 1 B1 1 pieces ~8x7mm 7 Adipose Tissue Adipose - Subcutaneous 0002190 236 847 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.986026 481130 0.974192 0.990521 0.838637 23262 1 76 0.00380898 210 0 9.47329e+07 0.0255408 447914 9.56394e+07 1.61611e+07 23283 4.70095e+07 0 0.135555 0.990521 0.830688 9.47329e+07 0.00590048 2.08451e+07 1.26653e+07 2.10504e+07 228 2.11431e+07 1.72337e+07 0.00484999 2.11696e+07 50.0313 0.00468336 0.995017 0 50.2451 GTEX-WY7C-2526-SM-3NB2N 1 B1 2 pieces ~10x8mm, minimal interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 237 847 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985398 645625 0.975586 0.990257 0.870806 21798 1 76 0.00362418 377 0 1.18936e+08 0.0241849 1.27333e+06 1.20106e+08 2.14564e+07 21814 5.90123e+07 0 0.10478 0.990257 0.862322 1.18936e+08 0.00551545 2.57239e+07 2.06356e+07 2.60195e+07 371 2.61619e+07 2.37534e+07 0.00456517 2.61236e+07 49.9634 0.0106017 0.995116 0 50.2856 GTEX-WY7C-2626-SM-3NB2P 1 B1 2 pieces ~3.5mm d. Clean. Trace fat adherent on one 8.2 Nerve Nerve - Tibial 0001323 248 836 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983942 727634 0.962038 0.988294 0.759944 25922 1 76 0.00385423 292 0 1.14179e+08 0.0376544 416274 1.15532e+08 1.93333e+07 25975 5.66357e+07 0 0.202094 0.988294 0.751048 1.14179e+08 0.00560274 2.47991e+07 1.83538e+07 2.49965e+07 291 2.51153e+07 1.82024e+07 0.00472464 2.51699e+07 50.0543 0.00360312 0.992645 0 50.1982 GTEX-WY7C-2726-SM-3NB3P 1 B1 2 pieces 11x10mm. All fibroadipose 6.7 Breast Breast - Mammary Tissue 0008367 250 835 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.984106 400270 0.973179 0.989058 0.824871 23697 1 76 0.00386322 207 0 9.73945e+07 0.0265957 569435 9.8472e+07 1.70526e+07 23725 4.83021e+07 0 0.148308 0.989058 0.815845 9.73945e+07 0.00597981 2.14547e+07 1.27149e+07 2.15996e+07 246 2.1669e+07 1.56033e+07 0.00491622 2.18475e+07 50.2051 0.00578271 0.99401 0 50.1682 GTEX-WY7C-2826-SM-3NB3Q 1 B1 2 pieces ~2.5mm d. Clean specimens 7.1 Blood Vessel Artery - Tibial 0007610 253 833 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.983396 607992 0.968212 0.988531 0.837823 22397 1 76 0.00392734 211 0 9.80298e+07 0.0314622 459312 9.91672e+07 1.78566e+07 22424 4.85823e+07 0 0.130389 0.988531 0.828214 9.80298e+07 0.0061196 2.06586e+07 1.39717e+07 2.09768e+07 236 2.0987e+07 1.75255e+07 0.00501778 2.11302e+07 50.17 0.00463169 0.993665 0 50.3821 GTEX-WYBS-0005-SM-4ONDR C1 5.9 Blood Whole Blood 0013756 789 BP-28174 RNA isolation_PAXgene Blood RNA (Manual) 07/27/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.980487 580960 0.97572 0.982651 0.78963 20186 1 76 0.00241759 153 0 1.01722e+08 0.0224553 1.1886e+06 1.03518e+08 7.53988e+06 20204 5.04726e+07 0 0.18609 0.982651 0.775931 1.01722e+08 0.00367242 2.33765e+07 1.08912e+08 2.36366e+07 175 2.36742e+07 2.34026e+07 0.00304363 2.35768e+07 49.8969 0.0114821 0.984815 0 50.2766 GTEX-WYBS-0008-SM-4ONDX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 854 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.992126 403816 0.980237 0.993743 0.869191 19710 1 76 0.00153123 152 0 6.90412e+07 0.0194549 218429 6.94759e+07 4.4612e+06 19725 3.43911e+07 0 0.111046 0.993743 0.863753 6.90412e+07 0.00223803 1.55132e+07 8.56566e+06 1.55925e+07 153 1.56413e+07 1.79076e+07 0.00188405 1.55789e+07 49.9 0.00314396 0.99536 0 50.1275 GTEX-WYBS-0126-SM-3PYKA 2 C1 6 pieces, up to 8x2mm; squamous epithelium peculiarly atrophic, less than 1% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 853 610 BP-29327 DNA Isolation from Tissue via QIAgen Spin Column 08/13/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R06C01 GTEX-WYBS-0126-SM-3PZ7C 2 C1 6 pieces, up to 8x2mm; squamous epithelium peculiarly atrophic, less than 1% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 853 610 BP-29327 DNA Isolation from Tissue via QIAgen Spin Column 08/13/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8976358006_R02C01 GTEX-WYBS-0126-SM-4SVQC 2 C1 6 pieces, up to 8x2mm; squamous epithelium peculiarly atrophic, less than 1% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 853 610 BP-29327 DNA Isolation from Tissue via QIAgen Spin Column 08/13/2012 LCSET-4029 09/15/2013 Standard Exome Sequencing v2 (ICE) WES GTEX-WYBS-0126-SM-7DRP7 2 C1 6 pieces, up to 8x2mm; squamous epithelium peculiarly atrophic, less than 1% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 853 610 BP-29327 DNA Isolation from Tissue via QIAgen Spin Column 08/13/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-WYBS-0126-SM-CLTFZ 2 C1 6 pieces, up to 8x2mm; squamous epithelium peculiarly atrophic, less than 1% thickness Skin Skin - Sun Exposed (Lower leg) 0004264 853 610 BP-29327 DNA Isolation from Tissue via QIAgen Spin Column 08/13/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-WYBS-0326-SM-3NM8S 1 C1 2 pieces, 5x3 & 6x3mm; ~.5mm adherent discontinuous fat 7.1 Nerve Nerve - Tibial 0001323 860 604 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989412 460446 0.964747 0.991906 0.747069 26105 1 76 0.00393189 393 0 1.22508e+08 0.0349381 569172 1.23507e+08 2.2638e+07 26157 6.09016e+07 0 0.217678 0.991906 0.741023 1.22508e+08 0.00496552 2.69024e+07 1.71303e+07 2.69525e+07 332 2.7e+07 1.843e+07 0.0044474 2.71516e+07 50.1399 0.0046084 0.9944 0 50.0465 GTEX-WYBS-0426-SM-3NM9M 1 C1 2 pieces, 3x1 & 2.5x1mm; good clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 861 604 BP-29323 RNA isolation_PAXgene Tissue miRNA 08/13/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988976 503975 0.972747 0.99164 0.834081 22457 1 76 0.00383698 279 0 1.10532e+08 0.0268514 467939 1.11464e+08 2.32994e+07 22483 5.49248e+07 0 0.138666 0.99164 0.827108 1.10532e+08 0.00512096 2.36043e+07 1.1962e+07 2.36636e+07 321 2.37178e+07 2.09354e+07 0.00447725 2.38339e+07 50.122 0.00419813 0.994303 0 50.0627 GTEX-WYBS-0626-SM-3NMAS 1 C1 6 pieces, up to 8x3mm; squamous epithelium is 2-3% thickness 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 867 599 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990532 356660 0.978307 0.992865 0.780141 24556 1 76 0.00385699 292 0 1.0789e+08 0.0213447 441571 1.08665e+08 2.07834e+07 24603 5.36657e+07 0 0.198166 0.992865 0.774574 1.0789e+08 0.00502418 2.38366e+07 1.39491e+07 2.38385e+07 271 2.39166e+07 1.89938e+07 0.00443921 2.40035e+07 50.0907 0.00406359 0.995197 0 50.002 GTEX-WYBS-0926-SM-3NM94 2 C1 2 pieces, 11x7 & 10x6.5mm; atrophic TDLUs abundant, rep ones delineated 8.5 Breast Breast - Mammary Tissue 0008367 889 580 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988008 546069 0.967217 0.990665 0.71269 26325 1 76 0.0040504 213 0 1.05402e+08 0.0324302 416084 1.06396e+08 2.10771e+07 26388 5.23451e+07 0 0.254527 0.990665 0.706037 1.05402e+08 0.00522397 2.31805e+07 1.59039e+07 2.31952e+07 226 2.32845e+07 1.55921e+07 0.00463561 2.33665e+07 50.0879 0.00391072 0.993323 0 50.0158 GTEX-WYBS-1026-SM-4ONCY 1 C1 2 pieces, 9.5x7 & 8x5mm; 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 891 578 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.987388 360602 0.97215 0.98935 0.728379 23337 1 76 0.00225928 147 0 6.84382e+07 0.0274731 484033 6.91748e+07 4.72039e+06 23377 3.40111e+07 0 0.243772 0.98935 0.720622 6.84382e+07 0.00317562 1.50779e+07 1.1726e+07 1.51531e+07 153 1.51843e+07 1.02901e+07 0.00271654 1.51869e+07 50.0043 0.00699724 0.991313 0 50.1244 GTEX-WYBS-1126-SM-3NMAM 3 C1 2 pieces, 9x8.5 & 10x6.5mm; baadly autolyzed, diffuse active pneumonitis, possible diffuse alveolar damage sequence or other fibrosing pneumonitis, too autolyzed to evaluate further, consisten with clinical history 8.1 Lung Lung 0008952 894 577 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988187 535592 0.970941 0.990821 0.737061 25187 1 76 0.00423771 208 0 1.06858e+08 0.0286011 465289 1.07848e+08 2.18791e+07 25236 5.30762e+07 0 0.23388 0.990821 0.730295 1.06858e+08 0.00542266 2.34794e+07 1.91712e+07 2.35948e+07 225 2.36594e+07 1.74668e+07 0.00482861 2.36946e+07 50.0371 0.00431432 0.993455 0 50.1225 GTEX-WYBS-1226-SM-3NM9N 2 C1 2 pieces, 8x7 & 8x7mm; 6.1 Heart Heart - Atrial Appendage 0006631 896 575 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989511 371435 0.977422 0.992078 0.809152 22899 1 76 0.00382784 368 0 1.18384e+08 0.0224038 6.48962e+06 1.19329e+08 2.35194e+07 22929 5.88853e+07 0 0.16827 0.992078 0.802742 1.18384e+08 0.00503927 2.5762e+07 2.40855e+07 2.61284e+07 349 2.60494e+07 1.19927e+07 0.00443199 2.61127e+07 50.0607 0.0543841 0.994645 0 50.3531 GTEX-WYBS-1626-SM-4ONCA 2 C1 6 pieces, up to 8x3mm; good specimens, all muscularis, just autolyzed 6.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 915 561 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.980475 458151 0.967234 0.98294 0.78512 23064 1 76 0.0020547 204 0 8.47068e+07 0.0325607 1.58419e+06 8.6177e+07 6.03331e+06 23090 4.20843e+07 0 0.182114 0.98294 0.771726 8.47068e+07 0.00304316 1.83377e+07 1.23676e+07 1.85484e+07 244 1.85389e+07 1.04385e+07 0.00254769 1.85572e+07 50.0247 0.018383 0.985405 0 50.2857 GTEX-WYBS-1926-SM-3NM8N 3 C1 2 pieces, 8x7 & 8.5x7mm; unusually badly autolyzed 7.7 Thyroid Thyroid 0002046 922 557 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989207 399639 0.966099 0.991536 0.796994 24486 1 76 0.00388618 215 0 1.01471e+08 0.0335736 407185 1.02337e+08 1.83237e+07 24523 5.04613e+07 0 0.169105 0.991536 0.790248 1.01471e+08 0.00499817 2.21832e+07 1.69692e+07 2.22398e+07 243 2.22578e+07 1.83788e+07 0.00444087 2.2397e+07 50.1558 0.00397886 0.993866 0 50.0636 GTEX-WYBS-2426-SM-4ONDI 2 C1 2 pieces, 8x7 & 7x6mm; ~50% corpora ablicantia, delineated 6.6 Ovary Ovary 0000992 943 539 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.987496 399385 0.96299 0.989388 0.728039 23476 1 76 0.00193281 172 0 8.27743e+07 0.0367848 271395 8.36622e+07 5.40839e+06 23517 4.11588e+07 0 0.234951 0.989388 0.720313 8.27743e+07 0.00290065 1.79709e+07 1.17124e+07 1.81076e+07 181 1.81065e+07 1.37892e+07 0.00241581 1.81404e+07 50.0468 0.00324394 0.99128 0 50.1894 GTEX-WYJK-0001-SM-3PYKX C1 Blood Whole Blood 0013756 764 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R05C02 GTEX-WYJK-0001-SM-3PZ7Z C1 Blood Whole Blood 0013756 764 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8514840038_R03C01 GTEX-WYJK-0001-SM-3UZEW C1 Blood Whole Blood 0013756 764 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 LCSET-2665,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-WYJK-0001-SM-5URBR C1 Blood Whole Blood 0013756 764 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 LCSET-5270,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WYJK-0005-SM-3NMA1 C1 7.9 Blood Whole Blood 0013756 764 BP-28174 RNA isolation_PAXgene Blood RNA (Manual) 07/27/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.97961 661284 0.971194 0.982246 0.778064 23022 1 76 0.00414358 194 0 1.14501e+08 0.0281451 799329 1.16571e+08 2.39956e+07 23048 5.69231e+07 0 0.19313 0.982246 0.76425 1.14501e+08 0.00562383 2.59524e+07 1.02014e+08 2.62788e+07 209 2.63304e+07 2.4576e+07 0.00488172 2.6214e+07 49.8892 0.00685703 0.984882 0 50.3124 GTEX-WYJK-0008-SM-4ONDV C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 705 BP-32500 RNA isolation_Trizol Manual (Cell Pellet) 10/24/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.99057 484741 0.977202 0.992842 0.856891 20535 1 76 0.00156195 153 0 7.15447e+07 0.0224657 346381 7.20604e+07 4.91317e+06 20548 3.56052e+07 0 0.120311 0.992842 0.850758 7.15447e+07 0.00227918 1.59277e+07 9.82277e+06 1.59971e+07 155 1.60564e+07 1.79409e+07 0.00191974 1.60356e+07 49.9675 0.00480681 0.995115 0 50.1088 GTEX-WYJK-0126-SM-3NMAB 0 C1 6 pieces, up to 8x3mm; squmous epithlium is ~~2% thickness 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 704 750 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988402 447875 0.970804 0.991206 0.812556 24733 1 76 0.00394651 400 0 1.10281e+08 0.028908 606721 1.1126e+08 2.19703e+07 24768 5.48216e+07 0 0.158247 0.991206 0.805411 1.10281e+08 0.00534835 2.40379e+07 1.57889e+07 2.41315e+07 335 2.41921e+07 1.88029e+07 0.00464545 2.42756e+07 50.0861 0.00545319 0.994011 0 50.0972 GTEX-WYJK-0226-SM-EYYV8 0 C1 2 pieces, 10x9 & 9x8mm; 5.6 Adipose Tissue Adipose - Subcutaneous 0002190 706 749 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.977657 162049 0.973027 0.981494 0.789377 22370 1 76 0.00215741 146 0 6.95103e+07 0.0266726 438131 7.08209e+07 2.57722e+06 22393 3.45226e+07 0 0.18365 0.981494 0.774769 6.95103e+07 0.00389738 1.51604e+07 6.42399e+06 1.53075e+07 164 1.53372e+07 1.14391e+07 0.00302399 1.53837e+07 50.0757 0.00618647 0.985331 0 50.2414 GTEX-WYJK-0326-SM-3NMA8 0 C1 2 pieces, 7x4 & 7x4mm; discontinuous adherent fat up to ~0.5mm, delineated 7.1 Nerve Nerve - Tibial 0001323 708 747 BP-29433 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.987676 327325 0.962742 0.990333 0.769425 24937 1 76 0.00387816 286 0 1.08206e+08 0.0369749 327254 1.09262e+08 2.14127e+07 24986 5.3798e+07 0 0.193317 0.990333 0.761988 1.08206e+08 0.00508707 2.36206e+07 1.44865e+07 2.37243e+07 327 2.37323e+07 1.57773e+07 0.00448099 2.38934e+07 50.1692 0.00299513 0.992991 0 50.1095 GTEX-WYJK-0426-SM-3NM9G 0 C1 2 pieces, 3x1 & 3x1mm; good clean specimens 8.5 Blood Vessel Artery - Tibial 0007610 709 747 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.987988 570064 0.96773 0.991063 0.814553 22601 1 76 0.00390332 276 0 1.02293e+08 0.0319061 337169 1.03216e+08 2.12201e+07 22636 5.08096e+07 0 0.153177 0.991063 0.807273 1.02293e+08 0.00535981 2.18402e+07 1.33462e+07 2.19266e+07 260 2.19919e+07 1.77108e+07 0.00462931 2.20797e+07 50.0997 0.00326665 0.994137 0 50.0986 GTEX-WYJK-0526-SM-3NM8Z 0 C1 6 pieces, up to 7x3mm; squmoust epithelium is 2-4% thicknes 8.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 748 708 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989096 735248 0.957722 0.991574 0.737194 26361 1 76 0.00388282 279 0 1.0601e+08 0.0420618 621167 1.06911e+08 2.092e+07 26414 5.27067e+07 0 0.220528 0.991574 0.730982 1.0601e+08 0.00511276 2.30743e+07 2.53551e+07 2.31442e+07 260 2.31696e+07 1.50387e+07 0.00449626 2.33183e+07 50.1599 0.00581013 0.994051 0 50.0756 GTEX-WYJK-0626-SM-4ONCZ 1 C1 2 pieces, 9x8 & 8x7mm; glandular hyperplastic nodules, rep. one deineated 7.5 Prostate Prostate 0002367 752 705 BP-29435 RNA isolation_PAXgene Tissue miRNA 08/14/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988167 432519 0.962824 0.990101 0.742917 24709 1 76 0.00201864 168 0 7.77035e+07 0.0369317 598619 7.84803e+07 5.11614e+06 24755 3.8642e+07 0 0.219907 0.990101 0.735563 7.77035e+07 0.00306147 1.70382e+07 1.11397e+07 1.71831e+07 185 1.71852e+07 1.06641e+07 0.00253903 1.71947e+07 50.0139 0.00762763 0.992035 0 50.2116 GTEX-WYJK-0726-SM-4ONC9 1 C1 2 pieces, 10x8.5 & 8x7mm; 6.9 Spleen Spleen 0002106 754 704 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.976351 441412 0.94698 0.978505 0.671442 24126 1 76 0.00229618 123 0 6.36527e+07 0.0525023 267433 6.5051e+07 4.39128e+06 24166 3.16285e+07 0 0.275539 0.978505 0.657009 6.36527e+07 0.00334258 1.37277e+07 1.40924e+07 1.38438e+07 132 1.38837e+07 8.36887e+06 0.00281823 1.38324e+07 49.9073 0.00411113 0.980658 0 50.2105 GTEX-WYJK-0826-SM-3NM8Y 1 C1 2 pieces, 10x8 & 9x8mm; moderate congestion, ? features DAD 7.9 Lung Lung 0008952 757 701 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989321 421864 0.970144 0.991961 0.75443 26603 1 76 0.0039654 380 0 1.30552e+08 0.0294857 632887 1.3161e+08 2.57166e+07 26673 6.4883e+07 0 0.215714 0.991961 0.748366 1.30552e+08 0.00510431 2.87861e+07 1.49405e+07 2.88683e+07 342 2.89488e+07 2.08031e+07 0.00453334 2.90399e+07 50.0786 0.00480882 0.994602 0 50.0713 GTEX-WYJK-0926-SM-4ONCF 1 C1 2 pieces, one with d of~2mm, up to 0.5mm adherent fat, other mainly fat, trace vessel, ~.3mm d. 6.5 Blood Vessel Artery - Coronary 0001621 772 687 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989514 308239 0.965282 0.991627 0.760859 22512 1 76 0.0019642 148 0 7.06723e+07 0.0344359 337726 7.1269e+07 4.82778e+06 22536 3.51206e+07 0 0.204422 0.991627 0.754489 7.06723e+07 0.00291941 1.52123e+07 6.82758e+06 1.53148e+07 165 1.5332e+07 1.08853e+07 0.00244079 1.53428e+07 50.0177 0.00473875 0.993741 0 50.1678 GTEX-WYJK-1026-SM-3NM8W 1 C1 2 pieces, 8x8 & 7x6mm; minimal interstitial fibrosis 7.7 Heart Heart - Left Ventricle 0006566 774 685 BP-29473 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990659 452027 0.97718 0.993353 0.835011 22508 1 76 0.0036532 370 0 1.1742e+08 0.0226351 2.29112e+06 1.18205e+08 2.3912e+07 22537 5.84119e+07 0 0.142169 0.993353 0.82946 1.1742e+08 0.00487463 2.58838e+07 2.20126e+07 2.58832e+07 333 2.58675e+07 1.79719e+07 0.00426226 2.61915e+07 50.3112 0.0193825 0.996046 0 49.9994 GTEX-WYJK-1126-SM-3NM9Z 1 C1 2 pieces, 10x6 & 9x8mm; 7.5 Heart Heart - Atrial Appendage 0006631 777 683 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991131 514543 0.969263 0.993434 0.800003 24393 1 76 0.00367213 371 0 1.19156e+08 0.0305576 2.46618e+06 1.19944e+08 2.31808e+07 24430 5.9301e+07 0 0.16926 0.993434 0.79475 1.19156e+08 0.00474679 2.58398e+07 2.55375e+07 2.58186e+07 334 2.57518e+07 1.38278e+07 0.00420821 2.61652e+07 50.3982 0.0205611 0.995737 0 49.9795 GTEX-WYJK-1226-SM-4ONCP 1 C1 6 pieces, up to 7x3mm; 7.9 Blood Vessel Artery - Aorta 0001496 778 683 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.98968 582353 0.970317 0.991864 0.816067 22194 1 76 0.00181986 172 0 7.93752e+07 0.0292726 201844 8.00263e+07 4.95796e+06 22215 3.94643e+07 0 0.15425 0.991864 0.809427 7.93752e+07 0.00273674 1.71362e+07 8.52811e+06 1.72245e+07 199 1.72536e+07 1.39935e+07 0.00227729 1.72885e+07 50.0504 0.00252222 0.994047 0 50.1285 GTEX-WYJK-1326-SM-3NB2T 1 C1 2 pieces, 7x5 & 8x6mm; no ductal elements 8.8 Breast Breast - Mammary Tissue 0008367 780 681 BP-29478 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2318 12/16/2012 TruSeq.v1 RNASEQ 0.985393 674082 0.958955 0.98974 0.724806 26931 1 76 0.00386071 282 0 1.1969e+08 0.0407938 346467 1.2093e+08 2.09714e+07 26994 5.93836e+07 0 0.234149 0.98974 0.71737 1.1969e+08 0.00575517 2.59155e+07 1.989e+07 2.60797e+07 282 2.62279e+07 1.79184e+07 0.00480378 2.6276e+07 50.0458 0.00286501 0.994086 0 50.1578 GTEX-WYJK-1426-SM-3NM8V 1 C1 2 pieces, 8x8 & 9x6mm; 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 782 682 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989492 574225 0.966776 0.99218 0.785509 24184 1 76 0.00373252 377 0 1.09813e+08 0.0329774 532029 1.10679e+08 2.06598e+07 24224 5.46103e+07 0 0.181267 0.99218 0.779366 1.09813e+08 0.00495208 2.39559e+07 1.94466e+07 2.40431e+07 331 2.40891e+07 1.72457e+07 0.00434065 2.42e+07 50.1148 0.00480696 0.994867 0 50.0909 GTEX-WYJK-1526-SM-4ONCW 1 C1 3 pieces, up to 4.5x2mm; trace mucosa, no lymphoid elements noted 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 787 678 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988585 569713 0.969729 0.990994 0.792351 23995 1 76 0.00180949 278 0 9.41332e+07 0.030021 471672 9.49887e+07 6.6109e+06 24026 4.68368e+07 0 0.177378 0.990994 0.785215 9.41332e+07 0.00285778 2.0408e+07 1.25381e+07 2.05968e+07 289 2.06232e+07 1.43931e+07 0.00233236 2.06021e+07 49.9744 0.00496556 0.993404 0 50.2302 GTEX-WYJK-1626-SM-3NM9J 1 C1 2 pieces, 9x7 & 8x6mm; good specimens 7.3 Thyroid Thyroid 0002046 790 676 BP-29482 RNA isolation_PAXgene Tissue miRNA 08/15/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988601 502102 0.961288 0.991171 0.72981 25678 1 76 0.00386464 208 0 1.03067e+08 0.038434 265674 1.03985e+08 2.05955e+07 25736 5.1223e+07 0 0.231478 0.991171 0.723367 1.03067e+08 0.00504392 2.23944e+07 1.57527e+07 2.24463e+07 236 2.25117e+07 1.4941e+07 0.00445275 2.25915e+07 50.0884 0.00255492 0.993742 0 50.0579 GTEX-WYJK-1726-SM-3NM9U 0 C1 2 pieces, 9x7 & 10x7mm; less than ~10% Interstitial fat 7.8 Muscle Muscle - Skeletal 0011907 792 674 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989642 485123 0.980046 0.992454 0.886132 20318 1 76 0.00364292 378 0 1.11317e+08 0.0197117 1.15821e+06 1.12163e+08 2.30901e+07 20325 5.53578e+07 0 0.0939147 0.992454 0.879444 1.11317e+08 0.00498108 2.4154e+07 1.7108e+07 2.43089e+07 352 2.43212e+07 2.17193e+07 0.00431011 2.44292e+07 50.1108 0.0103262 0.995265 0 50.1598 GTEX-WYJK-1826-SM-4ONDM 1 C1 3 pieces, up to 9x7mm; spermatogenesis present 7.4 Testis Testis 0000473 795 672 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989447 707592 0.916558 0.991491 0.71866 31433 1 76 0.00191311 133 0 6.10267e+07 0.083152 477182 6.15504e+07 4.05801e+06 31483 3.03566e+07 0 0.197898 0.991491 0.712545 6.10267e+07 0.0028027 1.24559e+07 1.65119e+07 1.25694e+07 126 1.26298e+07 9.85866e+06 0.00235699 1.25182e+07 49.7781 0.0077527 0.993535 0 50.2268 GTEX-WYJK-1926-SM-4ONDP 1 C1 6 pieces, up to 5x2mm; good specimens, squamous mucosa up to ~15% thickness 9.5 Esophagus Esophagus - Mucosa 0006920 796 672 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990617 477872 0.971055 0.992319 0.798773 21846 1 76 0.00185806 136 0 6.10845e+07 0.0286805 116948 6.15574e+07 3.88406e+06 21868 3.03942e+07 0 0.172282 0.992319 0.792637 6.10845e+07 0.00279468 1.36576e+07 8.48791e+06 1.37246e+07 139 1.37634e+07 1.18848e+07 0.00232556 1.37302e+07 49.9397 0.00189982 0.994022 0 50.1223 GTEX-WYJK-2026-SM-4ONDE 1 C1 6 pieces, up to 9x3mm; good specimens 7.9 Esophagus Esophagus - Muscularis 0004648 798 670 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989182 433797 0.971311 0.991142 0.816442 22267 1 76 0.00180697 165 0 7.10081e+07 0.0284261 365237 7.16428e+07 4.82541e+06 22288 3.53396e+07 0 0.154869 0.991142 0.80921 7.10081e+07 0.00264681 1.53224e+07 8.51292e+06 1.54833e+07 177 1.54787e+07 1.19757e+07 0.00222606 1.54667e+07 49.9807 0.00509803 0.993101 0 50.2611 GTEX-WYJK-2126-SM-4ONDG 1 C1 6 pieces, up to 7.5x7mm; good specimens, trace adhrent fat, delineated 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 799 669 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989316 1.6677e+06 0.967868 0.991213 0.787795 27584 1 76 0.00185601 536 0 2.9509e+08 0.031867 2.41447e+06 2.97706e+08 1.98723e+07 27678 1.46741e+08 0 0.180073 0.991213 0.780873 2.9509e+08 0.00287791 6.37797e+07 3.83323e+07 6.43128e+07 556 6.4123e+07 4.23445e+07 0.00236598 6.45463e+07 50.1645 0.00811025 0.99311 0 50.2081 GTEX-WYJK-2226-SM-4ONDJ 1 C1 6 pieces, up to 8x2mm; Mucosa well preserved up to ~30% thickness 6.8 Colon Colon - Transverse 0001157 801 668 BP-29540 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.98971 472902 0.970934 0.991855 0.809752 23216 1 76 0.00186669 168 0 7.05264e+07 0.0285659 639042 7.11056e+07 4.57904e+06 23241 3.50682e+07 0 0.161182 0.991855 0.803156 7.05264e+07 0.00284245 1.54493e+07 1.02131e+07 1.55486e+07 186 1.55301e+07 1.05393e+07 0.00235352 1.56217e+07 50.1471 0.00898723 0.993999 0 50.1602 GTEX-WYJK-2326-SM-4ONDN 1 C1 6 pieces, up to 8x2mm; ~60% muscle, delineated 9.5 Colon Colon - Sigmoid 0001159 804 666 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989189 514300 0.965276 0.991473 0.774934 22993 1 76 0.00189841 150 0 6.45802e+07 0.0343232 1.00966e+06 6.51356e+07 4.31431e+06 23019 3.20972e+07 0 0.190342 0.991473 0.768326 6.45802e+07 0.00278611 1.4178e+07 1.31626e+07 1.42758e+07 169 1.42438e+07 8.31396e+06 0.00234124 1.4358e+07 50.1998 0.015501 0.993757 0 50.172 GTEX-WYJK-2426-SM-4ONDQ 1 C1 2 pieces, 8x7 & 8x7mm; well preserved, islets well preserved, ensquared; ~30% interstital fat, rep areas delineated 9.4 Pancreas Pancreas 0001150 807 663 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.988018 1.02872e+06 0.949122 0.990466 0.776755 22243 1 76 0.00198891 111 0 6.90755e+07 0.0507325 183621 6.97404e+07 4.87545e+06 22263 3.4343e+07 0 0.172367 0.990466 0.76935 6.90755e+07 0.00294079 1.5305e+07 3.33183e+07 1.54614e+07 118 1.55046e+07 1.65152e+07 0.00246367 1.54782e+07 49.9574 0.00263292 0.992914 0 50.2542 GTEX-WYJK-2526-SM-4ONDF 1 C1 6 pieces, up to 9x4mm; ~mucosa well preserved, up to ~30% thickness 8.7 Stomach Stomach 0000945 809 662 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.985906 644251 0.957048 0.988303 0.764326 23224 1 76 0.00190852 187 0 6.55976e+07 0.0426484 1.09531e+06 6.6374e+07 4.48113e+06 23246 3.26165e+07 0 0.192722 0.988303 0.755385 6.55976e+07 0.0030215 1.44233e+07 2.9029e+07 1.45248e+07 176 1.45069e+07 9.18778e+06 0.00246366 1.46137e+07 50.1834 0.0165021 0.990699 0 50.1753 GTEX-WYVS-0002-SM-3PYKP B1 Blood Whole Blood 0013756 -165 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R03C02 GTEX-WYVS-0002-SM-3PZ7R B1 Blood Whole Blood 0013756 -165 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8514840038_R01C01 GTEX-WYVS-0002-SM-3USR9 B1 Blood Whole Blood 0013756 -165 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-WYVS-0002-SM-5URCN B1 Blood Whole Blood 0013756 -165 BP-28195 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 07/27/2012 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WYVS-0004-SM-4ONDT B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 82 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990047 915475 0.963739 0.992492 0.817716 20596 1 76 0.00206693 138 0 6.61292e+07 0.0351625 337605 6.66295e+07 4.39662e+06 20619 3.28591e+07 0 0.146022 0.992492 0.811577 6.61292e+07 0.00292261 1.45743e+07 1.07135e+07 1.47005e+07 139 1.47959e+07 1.50104e+07 0.00249372 1.46438e+07 49.7416 0.0050669 0.994936 0 50.2156 GTEX-WYVS-0006-SM-3NMA7 B1 8.7 Blood Whole Blood 0013756 83 BP-28174 RNA isolation_PAXgene Blood RNA (Manual) 07/27/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.985451 1.50128e+06 0.947811 0.988325 0.790616 21638 1 76 0.00447791 193 0 1.0888e+08 0.051434 488780 1.10166e+08 2.19008e+07 21655 5.41148e+07 0 0.157195 0.988325 0.781386 1.0888e+08 0.00600214 2.36268e+07 8.81464e+07 2.39172e+07 203 2.39782e+07 2.26368e+07 0.00523781 2.39034e+07 49.9219 0.00443677 0.991199 0 50.3054 GTEX-WYVS-0008-SM-4ONDY B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 311 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991412 560529 0.970544 0.992997 0.826438 21176 1 76 0.0016985 149 0 7.07043e+07 0.0290687 177722 7.12029e+07 4.5781e+06 21196 3.52013e+07 0 0.144106 0.992997 0.82065 7.07043e+07 0.00245368 1.5646e+07 8.8078e+06 1.57256e+07 164 1.5775e+07 1.43349e+07 0.00207549 1.57063e+07 49.8909 0.00249599 0.994583 0 50.1268 GTEX-WYVS-0126-SM-4ONDH 1 B1 2 pieces, 11x7 & 9x9mm; mild congestion 9.7 Spleen Spleen 0002106 230 868 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.9893 1.70225e+06 0.951586 0.991179 0.699825 26831 1 76 0.00233959 375 0 1.34562e+08 0.0472129 741512 1.35759e+08 9.14073e+06 26899 6.68489e+07 0 0.25176 0.991179 0.693652 1.34562e+08 0.00322349 2.93039e+07 3.62172e+07 2.94019e+07 362 2.95092e+07 1.97707e+07 0.0027807 2.94862e+07 49.9805 0.00546196 0.993059 0 50.0835 GTEX-WYVS-0226-SM-4ONDK 1 B1 2 pieces, 11x7 & 12x11mm; one is 60-70% interstitial and adherent fat, other is ~20% fat. Cortical areas well preserved, delineated 10 Adrenal Gland Adrenal Gland 0002369 231 868 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.990209 639733 0.966644 0.992162 0.791057 22237 1 76 0.00179096 156 0 7.03175e+07 0.0330538 1.39897e+06 7.0873e+07 4.74535e+06 22262 3.50035e+07 0 0.175587 0.992162 0.784856 7.03175e+07 0.00254989 1.53674e+07 1.57324e+07 1.54626e+07 177 1.54854e+07 1.04592e+07 0.00216968 1.54852e+07 49.9998 0.0197392 0.994114 0 50.1544 GTEX-WYVS-0326-SM-3NM9V 1 B1 2 pieces, 11x6 & 12x9mm; pathcy areas lymphocytic or Hashimoto thyroiditis, delineated, ~10% specimens 9.7 Thyroid Thyroid 0002046 234 865 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988704 1.02581e+06 0.954 0.991276 0.697596 26640 1 76 0.00397329 272 0 1.17367e+08 0.0454628 717132 1.184e+08 2.46913e+07 26715 5.83158e+07 0 0.256404 0.991276 0.691511 1.17367e+08 0.00513585 2.54474e+07 2.93443e+07 2.54912e+07 291 2.55577e+07 1.56154e+07 0.00455306 2.56908e+07 50.1299 0.00605686 0.993849 0 50.043 GTEX-WYVS-0426-SM-4ONDL 1 B1 6 pieces, up to 9x4mm; 9.6 Blood Vessel Artery - Aorta 0001496 235 865 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.991402 2.25009e+06 0.963436 0.993171 0.792386 25866 1 76 0.00181392 534 0 1.8578e+08 0.0360453 533138 1.87057e+08 1.15814e+07 25924 9.24004e+07 0 0.17105 0.993171 0.786975 1.8578e+08 0.00275415 3.98649e+07 3.41328e+07 3.99591e+07 441 4.0071e+07 3.48424e+07 0.0022832 4.01323e+07 50.0382 0.00285013 0.99494 0 50.059 GTEX-WYVS-0526-SM-3NM9W 1 B1 2 pieces, 9x7 & 10.5x8mm; patchy hemorrhagic acute/chronic pneumonia/necrotiziing, rep areas delineated 9.5 Lung Lung 0008952 239 861 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990011 1.4921e+06 0.958209 0.992428 0.769355 26248 1 76 0.00394275 375 0 1.22003e+08 0.0413158 477753 1.22934e+08 2.33374e+07 26293 6.0666e+07 0 0.188854 0.992428 0.763529 1.22003e+08 0.00520301 2.67018e+07 3.74465e+07 2.67654e+07 333 2.68391e+07 2.10578e+07 0.00457135 2.69575e+07 50.1101 0.00388626 0.994844 0 50.0595 GTEX-WYVS-0626-SM-4SOJY 1 B1 2 pieces, 11.5x10 & 11x9.5mm; 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 245 856 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.991709 506441 0.96763 0.993774 0.780807 23915 1 76 0.00209528 193 0 7.97807e+07 0.0320892 714167 8.02805e+07 3.98233e+06 23954 3.97074e+07 0 0.186822 0.993774 0.775946 7.97807e+07 0.00252968 1.7459e+07 1.25619e+07 1.76445e+07 204 1.76114e+07 1.19446e+07 0.00231203 1.76596e+07 50.0684 0.00889589 0.995839 0 50.2642 GTEX-WYVS-0726-SM-4ONDO 1 B1 6 pieces, up to 5x2mm; ~25%-50% thicknes is squamous mucosa, well preserved 10 Esophagus Esophagus - Mucosa 0006920 248 854 BP-29542 RNA isolation_PAXgene Tissue miRNA 08/16/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989419 662238 0.968468 0.991243 0.794047 21214 1 76 0.00193257 141 0 6.53879e+07 0.0311731 355223 6.59655e+07 4.28756e+06 21232 3.25461e+07 0 0.17442 0.991243 0.787094 6.53879e+07 0.00285922 1.46033e+07 1.47924e+07 1.4693e+07 145 1.47371e+07 1.28362e+07 0.00239504 1.46882e+07 49.9169 0.00538498 0.993068 0 50.1531 GTEX-WYVS-0826-SM-4RTXB 1 B1 6 pieces, up to 9x4mm; all muscle good specimens 8.5 Esophagus Esophagus - Muscularis 0004648 254 848 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3905 09/11/2013 TruSeq.v1 RNASEQ 0.992914 498837 0.969806 0.994482 0.803773 21910 1 76 0.00199365 142 0 6.4501e+07 0.0299674 641501 6.48589e+07 3.46144e+06 21926 3.21065e+07 0 0.166033 0.994482 0.799338 6.4501e+07 0.00279101 1.37551e+07 8.15908e+06 1.3994e+07 162 1.39183e+07 9.93979e+06 0.0023917 1.39383e+07 50.0358 0.00989072 0.996051 0 50.4305 GTEX-WYVS-0926-SM-4SOJV 1 B1 2 pieces, 10x9 & 9x8mm; ~10 interstitial fat/vessels, delineated. Islets well preserved, rep ones delineated 7.3 Pancreas Pancreas 0001150 256 847 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.98977 471101 0.977378 0.992292 0.854969 20904 1 76 0.00243334 106 0 7.33327e+07 0.0222525 227918 7.39024e+07 4.02129e+06 20919 3.64577e+07 0 0.12241 0.992292 0.848378 7.33327e+07 0.0029454 1.68718e+07 2.87334e+07 1.70179e+07 116 1.69706e+07 2.30336e+07 0.00268872 1.71165e+07 50.214 0.00308404 0.994814 0 50.2155 GTEX-WYVS-1026-SM-4SOJW 1 B1 6 pieces, up to 8.5x6mm; all muscle, good specimens 8.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 258 845 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990858 568191 0.9685 0.993349 0.798944 21659 1 76 0.00202626 140 0 6.08815e+07 0.0312059 493931 6.12892e+07 3.27789e+06 21682 3.02626e+07 0 0.169556 0.993349 0.79363 6.08815e+07 0.00268673 1.31006e+07 8.23897e+06 1.31869e+07 151 1.31568e+07 1.01363e+07 0.00235567 1.32884e+07 50.2487 0.00805903 0.99584 0 50.1641 GTEX-WYVS-1126-SM-4SOJX 1 B1 6 pieces, up to 10x5mm; all muscle, good specimens 8.2 Colon Colon - Sigmoid 0001159 266 838 BP-40888 RNA isolation_PAXgene Tissue miRNA 07/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989644 625874 0.968652 0.992765 0.78414 23820 1 76 0.00207251 216 0 9.49099e+07 0.0310542 640286 9.56015e+07 5.42713e+06 23853 4.71774e+07 0 0.184512 0.992765 0.778466 9.49099e+07 0.00261766 2.03826e+07 1.16073e+07 2.05597e+07 243 2.0581e+07 1.56995e+07 0.00234423 2.06501e+07 50.0838 0.00669745 0.995887 0 50.2164 GTEX-WYVS-1226-SM-4ONCL 1 B1 2 pieces, 8x8 & 10x6mm; all muscularis 8.2 Uterus Uterus 0000995 268 836 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.99076 422212 0.968123 0.99283 0.766139 23011 1 76 0.00187011 166 0 7.45497e+07 0.0315777 241660 7.50881e+07 4.98416e+06 23047 3.70956e+07 0 0.201984 0.99283 0.760646 7.45497e+07 0.00285885 1.62612e+07 8.01571e+06 1.64063e+07 169 1.64251e+07 1.21259e+07 0.00236345 1.63961e+07 49.9559 0.00321835 0.9949 0 50.2221 GTEX-WYVS-1326-SM-4ONCQ 1 B1 6 pieces, up to 8x3mm; ~well preserved mucosa, rep delineated, ~25% thickness 6.9 Stomach Stomach 0000945 274 831 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.983667 451468 0.978051 0.985454 0.836706 22584 1 76 0.00152645 328 0 8.11857e+07 0.0217559 1.03061e+06 8.2384e+07 4.95278e+06 22602 4.03781e+07 0 0.141345 0.985454 0.824536 8.11857e+07 0.00248264 1.84829e+07 8.69999e+07 1.88162e+07 245 1.88233e+07 2.00802e+07 0.00200368 1.86317e+07 49.7441 0.0125099 0.987242 0 50.4468 GTEX-WYVS-1426-SM-4ONCV 1 B1 6 pieces, up to 9x5mm; squamous mucosa is ~5% thickness, discontinuous 8.9 Vagina Vagina 0000996 278 827 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989155 381728 0.972063 0.990805 0.7748 23971 1 76 0.00196875 165 0 7.44383e+07 0.0273659 246633 7.51291e+07 4.93886e+06 23998 3.7053e+07 0 0.197263 0.990805 0.767675 7.44383e+07 0.00272888 1.65239e+07 9.18067e+06 1.66275e+07 167 1.66675e+07 1.319e+07 0.00234819 1.66098e+07 49.9133 0.00328279 0.992454 0 50.1561 GTEX-WYVS-1526-SM-4OND4 1 B1 2 pieces, 7.5x7 & 10x7mm; post menopausal atrophy; one all stroma, the other ~60% hilum, dlineated 8.2 Ovary Ovary 0000992 280 826 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989646 558819 0.964219 0.992339 0.724665 23829 1 76 0.00185902 148 0 7.23191e+07 0.0355145 225099 7.28774e+07 4.635e+06 23872 3.59499e+07 0 0.239554 0.992339 0.719113 7.23191e+07 0.00277075 1.58128e+07 9.71538e+06 1.58968e+07 156 1.5962e+07 1.16483e+07 0.00231364 1.59478e+07 49.9778 0.00308873 0.995033 0 50.1324 GTEX-WYVS-1626-SM-3NM9R 1 B1 6 pieces, up to 9.5x4mm; 1-2% thickness is squamous epithelium 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 282 824 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988648 553188 0.962113 0.991221 0.751555 25664 1 76 0.00396266 220 0 9.86043e+07 0.0376159 409174 9.94776e+07 2.0496e+07 25703 4.90057e+07 0 0.210558 0.991221 0.744957 9.86043e+07 0.00518343 2.1414e+07 1.65629e+07 2.14901e+07 217 2.15643e+07 1.5334e+07 0.00457146 2.15911e+07 50.0311 0.00411323 0.993794 0 50.0888 GTEX-WYVS-1726-SM-3NMAY 1 B1 2 pieces, 8x5 & 10x8mm; fibrous stroma, rare atrophic TDLUs present; rep delineated 7.9 Breast Breast - Mammary Tissue 0008367 291 816 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.987893 580628 0.961518 0.990442 0.721952 26591 1 76 0.00413475 204 0 1.02236e+08 0.0372818 365559 1.03223e+08 1.86251e+07 26654 5.07558e+07 0 0.239566 0.990442 0.715051 1.02236e+08 0.00543231 2.23665e+07 1.61873e+07 2.24067e+07 213 2.24897e+07 1.52635e+07 0.00478186 2.25417e+07 50.0577 0.00354146 0.992991 0 50.0449 GTEX-WYVS-1826-SM-4OND6 1 B1 6 pieces, up to 9.5x4mm; ~mucsoa well preserved, ~10% thickness 7.9 Colon Colon - Transverse 0001157 293 814 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3653 08/14/2013 TruSeq.v1 RNASEQ 0.989132 444224 0.971607 0.991555 0.793978 23847 1 76 0.00197934 167 0 7.38509e+07 0.027759 963639 7.44799e+07 5.10313e+06 23875 3.6707e+07 0 0.17763 0.991555 0.787272 7.38509e+07 0.0029112 1.61858e+07 9.36526e+06 1.62663e+07 187 1.6244e+07 1.10653e+07 0.00244413 1.63834e+07 50.2135 0.0129382 0.993977 0 50.1241 GTEX-WYVS-1926-SM-4PQZ2 1 B1 2 pieces, 9x8 & 10x9mm; minimal fat/congestion 8.2 Liver Liver 0001114 297 811 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.989553 586673 0.97404 0.99103 0.822946 24546 1 76 0.00200152 375 0 1.5582e+08 0.0247496 1.39578e+06 1.5723e+08 6.8598e+06 24579 7.7505e+07 0 0.151094 0.99103 0.815565 1.5582e+08 0.00276919 3.35217e+07 2.854e+07 3.36927e+07 338 3.37468e+07 3.00123e+07 0.00238478 3.36851e+07 49.9542 0.00887726 0.992507 0 50.1272 GTEX-WYVS-1926-SM-4SOIC 1 B1 2 pieces, 9x8 & 10x9mm; minimal fat/congestion 8.2 Liver Liver 0001114 297 811 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3995 09/19/2013 TruSeq.v1 EXCLUDE 0.988621 762401 0.964389 0.9916 0.80759 22396 1 76 0.00214861 158 0 8.15968e+07 0.0345067 759925 8.22879e+07 4.59571e+06 22421 4.05421e+07 0 0.156799 0.9916 0.800807 8.15968e+07 0.00258485 1.73766e+07 2.07215e+07 1.75517e+07 189 1.76172e+07 1.52331e+07 0.00236608 1.75463e+07 49.8993 0.00923495 0.99458 0 50.2507 GTEX-WYVS-2026-SM-4PQZ4 1 B1 1 piece, 4x1.5mm; good specmen; 40% is fat/fibrous interstitial tissue, delineated 8.8 Salivary Gland Minor Salivary Gland 0006330 304 805 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 EXCLUDE 0.983491 250228 0.974099 0.985087 0.818879 22276 1 76 0.00232668 190 0 5.98105e+07 0.0250956 137499 6.07159e+07 2.73152e+06 22298 2.97515e+07 0 0.15522 0.985087 0.806667 5.98105e+07 0.00318297 1.35844e+07 1.84529e+07 1.36737e+07 156 1.37075e+07 1.05422e+07 0.00275413 1.36437e+07 49.8834 0.00226463 0.986683 0 50.1637 GTEX-WYVS-2026-SM-4RGNS 1 B1 1 piece, 4x1.5mm; good specmen; 40% is fat/fibrous interstitial tissue, delineated 8.8 Salivary Gland Minor Salivary Gland 0006330 304 805 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.987956 898286 0.973222 0.989882 0.803626 24667 1 76 0.0024839 411 0 1.12156e+08 0.025992 300741 1.13303e+08 9.56287e+06 24704 5.57786e+07 0 0.169596 0.989882 0.795495 1.12156e+08 0.00313799 2.5397e+07 3.59642e+07 2.54978e+07 374 2.55813e+07 1.96951e+07 0.00281031 2.55304e+07 49.9503 0.00265431 0.991809 0 50.0991 GTEX-WYVS-2126-SM-3NMA3 0 B1 6 pieces, up to 10x3mm; sqaumous epithilum is ~2% thickness 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 311 798 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.987974 560311 0.962331 0.99064 0.748189 25173 1 76 0.00400086 243 0 9.5142e+07 0.037411 412360 9.6041e+07 1.88932e+07 25215 4.7284e+07 0 0.214142 0.99064 0.741186 9.5142e+07 0.00544559 2.05824e+07 1.79379e+07 2.06391e+07 209 2.07098e+07 1.45114e+07 0.00472128 2.07656e+07 50.0673 0.00429358 0.993306 0 50.0689 GTEX-WYVS-2326-SM-3NMAI 0 B1 2 pieces, 12x9 & 12x10mm; ~20% interstital fat delineated 8.6 Muscle Muscle - Skeletal 0011907 315 795 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990713 431787 0.980469 0.992906 0.863601 20985 1 76 0.00352447 271 0 1.18721e+08 0.0193407 2.11987e+06 1.19569e+08 2.33133e+07 21002 5.91054e+07 0 0.116868 0.992906 0.857475 1.18721e+08 0.00469575 2.58541e+07 2.16422e+07 2.58314e+07 330 2.58253e+07 2.05575e+07 0.00410881 2.60938e+07 50.2586 0.0177292 0.9951 0 49.9781 GTEX-WYVS-2426-SM-3NMA9 0 B1 2 pieces, 7x4 & 5x3mm; clean specimens, minimal adherent fat delineated 6.7 Nerve Nerve - Tibial 0001323 325 786 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988442 571758 0.962177 0.991115 0.722632 25917 1 76 0.00392799 281 0 1.11237e+08 0.0375525 400660 1.12234e+08 2.19719e+07 25990 5.52728e+07 0 0.239544 0.991115 0.716212 1.11237e+08 0.00523557 2.43211e+07 1.46711e+07 2.44308e+07 271 2.44857e+07 1.5378e+07 0.00458002 2.45617e+07 50.0775 0.00356985 0.993787 0 50.1125 GTEX-WYVS-2526-SM-3NMAT 0 B1 2 pieces, 2x1 & 2x1mm; , clean specimens 7.2 Blood Vessel Artery - Tibial 0007610 327 784 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989442 440396 0.970838 0.991918 0.789138 22821 1 76 0.00387468 209 0 1.01126e+08 0.0288334 716964 1.0195e+08 2.0243e+07 22849 5.02559e+07 0 0.181699 0.991918 0.78276 1.01126e+08 0.00513845 2.17096e+07 1.12474e+07 2.17492e+07 251 2.17767e+07 1.65175e+07 0.00450499 2.19249e+07 50.1696 0.00703253 0.994394 0 50.0456 GTEX-WZTO-0001-SM-4PQZY C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 416 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987792 1.32046e+06 0.963112 0.989378 0.80546 22734 1 76 0.0023143 304 0 1.35832e+08 0.0360429 941372 1.3729e+08 6.22097e+06 22779 6.75311e+07 0 0.157652 0.989378 0.796904 1.35832e+08 0.00308261 3.00287e+07 2.41046e+07 3.0213e+07 330 3.0315e+07 3.11051e+07 0.00269784 3.01426e+07 49.8575 0.00685681 0.990963 0 50.1529 GTEX-WZTO-0002-SM-3PYL2 C1 Blood Whole Blood 0013756 416 BP-28610,BP-28611 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R06C02 GTEX-WZTO-0002-SM-3PZ84 C1 Blood Whole Blood 0013756 416 BP-28610,BP-28611 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8514840038_R04C01 GTEX-WZTO-0002-SM-3USRF C1 Blood Whole Blood 0013756 416 BP-28610,BP-28611 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-WZTO-0002-SM-5URDU C1 Blood Whole Blood 0013756 416 BP-28610,BP-28611 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/02/2012 LCSET-5270,LCSET-5432 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-WZTO-0006-SM-3NM9T C1 8.3 Blood Whole Blood 0013756 416 BP-28597 RNA isolation_PAXgene Blood RNA (Manual) 08/02/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.948627 787247 0.970277 0.951368 0.786889 19348 1 76 0.00429926 102 0 1.01716e+08 0.0276545 155858 1.06916e+08 2.19496e+07 19358 5.04727e+07 0 0.183387 0.951368 0.748621 1.01716e+08 0.00627263 2.36315e+07 1.92794e+08 2.39403e+07 135 2.39473e+07 2.63972e+07 0.0052831 2.39275e+07 49.9793 0.00145776 0.954108 0 50.3246 GTEX-WZTO-0008-SM-4PQZZ C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 479 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.990052 325450 0.979244 0.991523 0.861878 19655 1 76 0.00172457 153 0 6.59734e+07 0.0204147 293472 6.65374e+07 2.8877e+06 19668 3.28431e+07 0 0.117366 0.991523 0.854572 6.59734e+07 0.00251438 1.48296e+07 8.25643e+06 1.48993e+07 144 1.49379e+07 1.73833e+07 0.00211889 1.48862e+07 49.9134 0.00441063 0.992993 0 50.1172 GTEX-WZTO-0011-R10B-SM-4E3KB C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.991121 903214 0.963675 0.993313 0.847991 24745 1 76 0.00243123 272 0 1.10385e+08 0.0356372 3.44628e+06 1.11128e+08 1.18799e+07 24770 5.49076e+07 0 0.115684 0.993313 0.842321 1.10385e+08 0.00333989 2.42087e+07 1.94967e+07 2.4276e+07 325 2.43602e+07 1.61495e+07 0.00288455 2.43524e+07 49.992 0.0310119 0.995506 0 50.0694 GTEX-WZTO-0011-R10B-SM-CYKUP C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 RIP-Seq GTEX-WZTO-0011-R10a-SM-AHZM6 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 430 ChIP-Seq GTEX-WZTO-0011-R11A-SM-4E3K9 C1, A1 8.6 Brain Brain - Cerebellar Hemisphere 0002037 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988568 856048 0.951376 0.991041 0.761905 24113 1 76 0.00274217 270 0 9.32124e+07 0.0480934 1.2433e+06 9.4055e+07 1.0247e+07 24144 4.63247e+07 0 0.189471 0.991041 0.755079 9.32124e+07 0.0037492 2.02158e+07 1.4353e+07 2.02905e+07 264 2.0434e+07 1.32411e+07 0.00324443 2.02905e+07 49.8238 0.0132189 0.993514 0 50.0923 GTEX-WZTO-0011-R1B-SM-3NMAR C1, A1 7.2 Brain Brain - Hippocampus 0001954 430 BP-30585 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988797 736502 0.956922 0.991854 0.827968 24289 1 76 0.00379915 273 0 9.09283e+07 0.0426574 3.89807e+06 9.16751e+07 1.88263e+07 24321 4.51706e+07 0 0.128954 0.991854 0.821223 9.09283e+07 0.00533038 1.99288e+07 2.06192e+07 2.00159e+07 277 2.00163e+07 1.19241e+07 0.00456241 2.02043e+07 50.2337 0.0425205 0.99491 0 50.1091 GTEX-WZTO-0011-R3B-SM-3NMC6 C1, A1 7.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 430 BP-30585 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.992006 809423 0.95586 0.994098 0.835793 24902 1 76 0.00271885 271 0 1.04166e+08 0.0434853 3.02966e+06 1.04784e+08 1.22892e+07 24921 5.18268e+07 0 0.120067 0.994098 0.83086 1.04166e+08 0.00404064 2.27796e+07 2.18025e+07 2.27998e+07 329 2.28308e+07 1.50641e+07 0.00337835 2.29643e+07 50.1457 0.0289135 0.99619 0 50.0222 GTEX-WZTO-0011-R4A-SM-3NMC7 C1, A1 7 Brain Brain - Amygdala 0001876 430 BP-30585 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990846 870862 0.953631 0.99332 0.839526 24357 1 76 0.00278574 373 0 1.02267e+08 0.0459641 4.23074e+06 1.02955e+08 1.27978e+07 24380 5.08732e+07 0 0.114105 0.99332 0.833917 1.02267e+08 0.00438204 2.22609e+07 2.77631e+07 2.23285e+07 358 2.22931e+07 1.2473e+07 0.0035819 2.2552e+07 50.2887 0.0410933 0.995793 0 50.0758 GTEX-WZTO-0011-R5B-SM-3NMC5 C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 430 BP-30585 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991442 722667 0.955546 0.993677 0.820501 25027 1 76 0.00277456 371 0 1.07025e+08 0.0440552 4.91831e+06 1.07706e+08 1.30213e+07 25058 5.32663e+07 0 0.135045 0.993677 0.815313 1.07025e+08 0.00424312 2.32392e+07 2.6472e+07 2.35371e+07 342 2.35319e+07 1.2589e+07 0.00350719 2.34792e+07 49.944 0.0456643 0.995911 0 50.3184 GTEX-WZTO-0011-R6B-SM-4E3J6 C1, A1 7.5 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988139 711294 0.959855 0.991437 0.82779 24522 1 76 0.00253882 270 0 9.14838e+07 0.0397077 4.52577e+06 9.22739e+07 1.07723e+07 24543 4.546e+07 0 0.132064 0.991437 0.820702 9.14838e+07 0.00365526 1.99565e+07 1.68851e+07 2.01651e+07 310 2.02133e+07 1.15681e+07 0.00309518 2.01926e+07 49.9744 0.0490471 0.994736 0 50.26 GTEX-WZTO-0011-R7B-SM-4E3IS C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98933 673325 0.961982 0.992151 0.83489 23689 1 76 0.00247547 270 0 8.97984e+07 0.0377081 5.42271e+06 9.05087e+07 1.04594e+07 23704 4.46571e+07 0 0.127092 0.992151 0.828337 8.97984e+07 0.00356614 1.95323e+07 2.27222e+07 1.98366e+07 326 1.97422e+07 9.74436e+06 0.00301926 1.987e+07 50.1613 0.0599137 0.994973 0 50.3864 GTEX-WZTO-0011-R8A-SM-4E3II C1, A1 7.4 Brain Brain - Hypothalamus 0001898 430 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989241 808294 0.958343 0.991907 0.82798 25363 1 76 0.00251403 273 0 9.81051e+07 0.0412029 3.16777e+06 9.89055e+07 1.08396e+07 25387 4.8787e+07 0 0.130363 0.991907 0.821279 9.81051e+07 0.00360888 2.15048e+07 1.90809e+07 2.16636e+07 327 2.16880e+07 1.3495e+07 0.00305998 2.17342e+07 50.0531 0.0320283 0.994574 0 50.1839 GTEX-WZTO-0126-SM-3NM95 0 C1 6 pieces, up to 6.5x3mm; squamous epithelium is ~2-3% thickness 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 478 838 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989349 561984 0.964043 0.991937 0.779696 26066 1 76 0.00386166 384 0 1.1179e+08 0.0357459 1.44478e+06 1.12699e+08 2.23156e+07 26105 5.55969e+07 0 0.184347 0.991937 0.773409 1.1179e+08 0.00507259 2.43304e+07 2.13985e+07 2.44984e+07 331 2.44835e+07 1.61861e+07 0.00446555 2.46288e+07 50.1479 0.0128198 0.994525 0 50.172 GTEX-WZTO-0326-SM-4PQYZ 1 C1 2 pieces, 7x6 & 9x7mm; spermatogenesis present 7.6 Testis Testis 0000473 485 833 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.989226 299266 0.918309 0.990735 0.70624 31274 1 76 0.00204271 117 0 5.61297e+07 0.0813954 579771 5.66546e+07 2.45783e+06 31321 2.79432e+07 0 0.212069 0.990735 0.699696 5.61297e+07 0.00285373 1.15032e+07 1.13392e+07 1.16101e+07 115 1.16438e+07 8.59013e+06 0.0024476 1.15479e+07 49.7932 0.0102334 0.992244 0 50.2313 GTEX-WZTO-0426-SM-3NM99 1 C1 2 pieces, 9x7 & 8x8mm; mild congestion; bronchioles well visualized, rep ones delineated, fairly well preserved 8.1 Lung Lung 0008952 492 826 BP-29770 RNA isolation_PAXgene Tissue miRNA 08/20/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988072 541639 0.967897 0.990844 0.714924 25433 1 76 0.00416992 275 0 1.14299e+08 0.0316998 635339 1.15355e+08 2.39692e+07 25495 5.67718e+07 0 0.252973 0.990844 0.708378 1.14299e+08 0.00525344 2.52184e+07 1.7277e+07 2.52842e+07 293 2.53818e+07 1.59056e+07 0.00471016 2.54328e+07 50.0501 0.0055077 0.993617 0 50.0652 GTEX-WZTO-0626-SM-4PQYY 1 C1 2 pieces, 8x7 & 7.5x7mm; no significant fat 7.4 Liver Liver 0001114 499 821 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.98787 189140 0.970335 0.990108 0.800691 20247 1 76 0.00200028 125 0 5.65883e+07 0.0295739 1.46774e+06 5.71536e+07 2.57337e+06 20260 2.81282e+07 0 0.169644 0.990108 0.79277 5.65883e+07 0.00301696 1.24526e+07 8.32252e+06 1.24922e+07 162 1.24095e+07 5.90769e+06 0.00250747 1.26511e+07 50.482 0.0256806 0.992346 0 50.0795 GTEX-WZTO-0826-SM-3NM8Q 1 C1 2 pieces, 9x7 & 10x7mm; ~10-20% interstitial fat 8.3 Muscle Muscle - Skeletal 0011907 508 813 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.991263 638167 0.977638 0.993657 0.870226 20939 1 76 0.00350842 269 0 1.10077e+08 0.0221633 1.81598e+06 1.10779e+08 2.09556e+07 20961 5.4776e+07 0 0.107412 0.993657 0.864706 1.10077e+08 0.00468983 2.38929e+07 2.11394e+07 2.38699e+07 324 2.37718e+07 2.13536e+07 0.00409771 2.42487e+07 50.4965 0.0163928 0.996051 0 49.976 GTEX-WZTO-0926-SM-4PQZ3 1 C1 2 pieces, 9x7.5 & 7x7mm; prominent glandular hyperplasia; on aliquot well -preserved (enclrcled/delineated), the other more autolyzed (score 2-3) 7.4 Prostate Prostate 0002367 510 811 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.98854 299080 0.958643 0.990304 0.763611 23385 1 76 0.00204318 126 0 5.53766e+07 0.0411328 733374 5.59188e+07 2.56453e+06 23405 2.75441e+07 0 0.195032 0.990304 0.756207 5.53766e+07 0.00305928 1.21802e+07 1.08485e+07 1.22918e+07 145 1.22776e+07 6.78901e+06 0.00255032 1.22945e+07 50.0343 0.013115 0.992068 0 50.2279 GTEX-WZTO-1026-SM-3NM9P 0 C1 2 pieces, 6x4 & 6x5mm; discontinous rim of adherent fat up to ~0.5mm, delineated 7.7 Nerve Nerve - Tibial 0001323 511 811 BP-29831 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989233 574975 0.960443 0.991623 0.749559 25559 1 76 0.0038837 223 0 1.01744e+08 0.0392414 393322 1.02604e+08 1.80621e+07 25608 5.05813e+07 0 0.210885 0.991623 0.74328 1.01744e+08 0.00508836 2.22112e+07 1.67663e+07 2.23087e+07 244 2.23498e+07 1.54871e+07 0.00448458 2.24126e+07 50.0701 0.00383341 0.994013 0 50.1095 GTEX-WZTO-1126-SM-3NM93 0 C1 2 pieces, 2.5x2 & 2x1.5mm; good clean specimens 7.9 Blood Vessel Artery - Tibial 0007610 513 809 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.989509 544210 0.967149 0.99211 0.805046 23037 1 76 0.00385819 216 0 1.02149e+08 0.0324681 540705 1.02961e+08 2.10122e+07 23064 5.07719e+07 0 0.162104 0.99211 0.798694 1.02149e+08 0.0052351 2.17439e+07 1.38949e+07 2.1808e+07 247 2.18268e+07 1.82107e+07 0.00454484 2.19866e+07 50.1824 0.00525156 0.994712 0 50.0736 GTEX-WZTO-1226-SM-3NMAZ 1 C1 2 pieces, 9x9 & 9x9mm; 7.5 Heart Heart - Atrial Appendage 0006631 515 808 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.981734 155854 0.971229 0.985315 0.804443 18761 1 76 0.00385177 92 0 3.23302e+07 0.0284904 995250 3.28121e+07 8.73892e+06 18770 1.6009e+07 0 0.166786 0.985315 0.79263 3.23302e+07 0.0050638 7.08807e+06 4.23201e+06 7.10129e+06 111 7.11782e+06 3.99453e+06 0.00445558 7.18047e+06 50.2191 0.0303318 0.988897 0 50.0466 GTEX-WZTO-1326-SM-3NM8X 1 C1 2 pieces, 8x8 & 10x9mm; 7.5 Heart Heart - Left Ventricle 0006566 518 806 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990431 766848 0.973015 0.993077 0.843561 23107 1 76 0.00367687 371 0 1.25893e+08 0.026746 5.2832e+06 1.2677e+08 2.45687e+07 23136 6.26209e+07 0 0.129454 0.993077 0.837721 1.25893e+08 0.00497043 2.75891e+07 2.9204e+07 2.76595e+07 341 2.76649e+07 2.06622e+07 0.00432192 2.7894e+07 50.2062 0.0416753 0.995723 0 50.0637 GTEX-WZTO-1326-SM-CYKUQ-ELUATE 1 C1 2 pieces, 8x8 & 10x9mm; 7.5 Heart Heart - Left Ventricle 0006566 518 806 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 RIP-Seq GTEX-WZTO-1326-SM-CYKUQ-INPUT 1 C1 2 pieces, 8x8 & 10x9mm; 7.5 Heart Heart - Left Ventricle 0006566 518 806 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 RIP-Seq GTEX-WZTO-1326-SM-CYKUQ-SUP 1 C1 2 pieces, 8x8 & 10x9mm; 7.5 Heart Heart - Left Ventricle 0006566 518 806 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 RIP-Seq GTEX-WZTO-1526-SM-4PQYQ 1 C1 6 pieces, up to 8x5mm; all muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 521 805 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.981184 266466 0.965189 0.982996 0.754427 23037 1 76 0.00220987 134 0 6.323e+07 0.0345942 763197 6.43238e+07 4.46577e+06 23061 3.14577e+07 0 0.210762 0.982996 0.741599 6.323e+07 0.00306852 1.36262e+07 7.69867e+06 1.37712e+07 154 1.3737e+07 8.06415e+06 0.0026384 1.37778e+07 50.0741 0.0118649 0.984809 0 50.2646 GTEX-WZTO-1626-SM-4PQYR 1 C1 6 pieces, up to 8x3mm; 8.1 Blood Vessel Artery - Aorta 0001496 522 805 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.98618 218242 0.970759 0.988306 0.763635 21798 1 76 0.00223212 120 0 6.04603e+07 0.028851 115226 6.11757e+07 2.87818e+06 21819 3.00439e+07 0 0.207124 0.988306 0.754705 6.04603e+07 0.00309358 1.30186e+07 5.75833e+06 1.31536e+07 134 1.31804e+07 1.02018e+07 0.00266192 1.31168e+07 49.8791 0.00188353 0.990432 0 50.2578 GTEX-WZTO-1726-SM-4PQYV 1 C1 6 pieces, up to 8x4mm; all muscularis, good specimens 6.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 524 804 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.985263 223727 0.968401 0.98699 0.750355 22314 1 76 0.00203307 119 0 5.2407e+07 0.0313125 621814 5.30978e+07 2.30019e+06 22336 2.60584e+07 0 0.218046 0.98699 0.740593 5.2407e+07 0.00298415 1.14174e+07 6.52711e+06 1.15192e+07 132 1.14959e+07 6.84627e+06 0.00250778 1.1534e+07 50.0827 0.0117107 0.988717 0 50.2221 GTEX-WZTO-2126-SM-4PQYW 2 C1 6 pieces, up to 9x4mm; mucosa ~40% thickness, moderately autolyzed 6.4 Stomach Stomach 0000945 534 796 BP-29929 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.987163 264496 0.971188 0.989187 0.811446 22856 1 76 0.00212726 234 0 7.09349e+07 0.028634 1.27294e+06 7.17103e+07 5.0992e+06 22874 3.52819e+07 0 0.159743 0.989187 0.802671 7.09349e+07 0.00315118 1.56268e+07 2.33185e+07 1.58032e+07 207 1.57564e+07 1.11131e+07 0.00263817 1.58194e+07 50.0998 0.0177512 0.99121 0 50.2807 GTEX-WZTO-2826-SM-3NM8P 1 C1 4 pieces, up to 5x3mm; ischemic changes in Purkinje cells 7.9 Brain Brain - Cerebellum 0002037 583 753 BP-29931 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988037 808612 0.945654 0.990601 0.72441 25287 1 76 0.00416868 270 0 1.05692e+08 0.0539887 1.68423e+06 1.06695e+08 2.11995e+07 25324 5.24872e+07 0 0.221244 0.990601 0.717601 1.05692e+08 0.00538907 2.2834e+07 2.12123e+07 2.28568e+07 281 2.29499e+07 1.25503e+07 0.0047773 2.30036e+07 50.0584 0.0157855 0.993165 0 50.025 GTEX-WZTO-2926-SM-3NM9I 1 C1 4 pieces, up to 6x4mm; 7.9 Brain Brain - Cortex 0001870 586 750 BP-29931 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.990802 746990 0.960909 0.993323 0.836655 25220 1 76 0.00375517 270 0 1.09788e+08 0.0386277 2.95014e+06 1.10526e+08 2.23071e+07 25243 5.46032e+07 0 0.124254 0.993323 0.831069 1.09788e+08 0.00498909 2.39566e+07 2.36696e+07 2.41571e+07 329 2.41419e+07 1.48323e+07 0.00437056 2.42402e+07 50.1016 0.0266919 0.995844 0 50.2084 GTEX-WZTO-3026-SM-3NMA2 1 C1 1 piece, 8x5.5mm; 8.1 Pituitary Pituitary 0000007 587 749 BP-29931 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-2351 12/16/2012 TruSeq.v1 RNASEQ 0.988169 1.0009e+06 0.940831 0.99105 0.73644 26348 1 76 0.00405992 199 0 1.00971e+08 0.0589049 401822 1.01883e+08 2.02387e+07 26396 5.01634e+07 0 0.204391 0.99105 0.729849 1.00971e+08 0.00559637 2.04957e+07 3.21564e+07 2.06354e+07 215 2.07084e+07 1.50666e+07 0.00482591 2.07131e+07 50.0056 0.00394397 0.993932 0 50.1698 GTEX-X15G-0001-SM-4PQZV B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -116 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987802 435565 0.956098 0.989588 0.775429 20096 1 76 0.00196857 120 0 5.42285e+07 0.0434827 354462 5.47991e+07 2.52179e+06 20120 2.69801e+07 0 0.180668 0.989588 0.767356 5.42285e+07 0.00275089 1.18856e+07 1.42431e+07 1.20098e+07 110 1.20615e+07 1.2128e+07 0.00235903 1.19306e+07 49.7273 0.0064684 0.991374 0 50.2598 GTEX-X15G-0002-SM-3PYKW B1 Blood Whole Blood 0013756 -115 BP-28772 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R03C01 GTEX-X15G-0002-SM-3PZ7J B1 Blood Whole Blood 0013756 -115 BP-28772 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340004_R03C01 GTEX-X15G-0002-SM-3USR6 B1 Blood Whole Blood 0013756 -115 BP-28772 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-X15G-0002-SM-7DRQ4 B1 Blood Whole Blood 0013756 -115 BP-28772 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/06/2012 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X15G-0005-SM-3NMDA B1 7.5 Blood Whole Blood 0013756 -116 BP-28869 RNA isolation_PAXgene Blood RNA (Manual) 08/07/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.986304 1.15061e+06 0.955472 0.988801 0.807445 19634 1 76 0.00306375 194 0 1.06878e+08 0.0438474 413932 1.08088e+08 1.36742e+07 19648 5.31906e+07 0 0.148027 0.988801 0.798403 1.06878e+08 0.00476039 2.35509e+07 9.95366e+07 2.39029e+07 209 2.39825e+07 2.42792e+07 0.00390993 2.37568e+07 49.7636 0.00382957 0.991298 0 50.3709 GTEX-X15G-0008-SM-4PR2D B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 355 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.990711 370061 0.978145 0.99207 0.85254 20138 1 76 0.00175729 146 0 6.83494e+07 0.0214944 283620 6.88957e+07 2.96295e+06 20151 3.40282e+07 0 0.125605 0.99207 0.84578 6.83494e+07 0.00251142 1.53497e+07 8.48487e+06 1.54124e+07 145 1.5459e+07 1.73728e+07 0.00213384 1.53952e+07 49.8966 0.00411666 0.993429 0 50.1018 GTEX-X15G-0426-SM-4PQZ6 1 B1 2 pieces, 10x9 & 11x8mm; minimal interstitial fibrosis 5.9 Heart Heart - Left Ventricle 0006566 217 1179 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.984838 193996 0.979502 0.987088 0.867904 19456 1 76 0.00215594 100 0 5.25076e+07 0.0203359 1.38111e+06 5.31944e+07 2.493e+06 19463 2.61285e+07 0 0.111598 0.987088 0.856698 5.25076e+07 0.00296346 1.16199e+07 6.99032e+06 1.17712e+07 136 1.17222e+07 8.19206e+06 0.00255878 1.17593e+07 50.0791 0.0259635 0.989339 0 50.3235 GTEX-X15G-0526-SM-3NMB7 1 B1 2 pieces, 9x6 & 9x5.5mm; 6.6 Thyroid Thyroid 0002046 225 1171 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.945988 8.78864e+06 0.960399 0.953455 0.71521 25542 1 76 0.00383788 127 0 8.16515e+07 0.0393509 430765 8.56375e+07 1.15199e+07 25592 3.8951e+07 0 0.245189 0.953455 0.681921 8.16515e+07 0.00479719 1.79813e+07 2.32946e+07 1.69614e+07 138 1.89312e+07 1.09524e+07 0.00431378 1.65593e+07 46.6584 0.0050301 0.960923 0 48.5407 GTEX-X15G-0626-SM-EVR32 1 B1 2 pieces, 11x6 & 9x5mm; patchy chronic bronciolitis, rep area delineated 5.5 Lung Lung 0008952 230 1165 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-10519 05/07/2017 TruSeq.v1 RNASEQ 0.988727 317978 0.970235 0.990581 0.799425 25768 1 76 0.00227641 275 0 1.10045e+08 0.0294556 461927 1.11091e+08 8.56436e+06 25813 5.47852e+07 0 0.170811 0.990581 0.791895 1.10045e+08 0.0033797 2.42061e+07 9.64914e+06 2.44648e+07 319 2.44088e+07 1.75791e+07 0.00282702 2.44478e+07 50.0399 0.0041581 0.992436 0 50.2658 GTEX-X15G-0726-SM-4PQZ5 1 B1 2 pieces, 10x9 & 8x7mm; well presrved, minimal fat, Islets well visualized; rep ones delineated 7.1 Pancreas Pancreas 0001150 234 1160 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.989585 410794 0.973276 0.991043 0.830599 21654 1 76 0.00232384 109 0 7.24803e+07 0.026564 198168 7.31354e+07 5.01368e+06 21669 3.6107e+07 0 0.142678 0.991043 0.823159 7.24803e+07 0.00306414 1.65522e+07 2.20455e+07 1.67793e+07 121 1.67548e+07 1.9562e+07 0.00269345 1.66874e+07 49.8992 0.0027096 0.992501 0 50.3407 GTEX-X15G-0826-SM-4PQZD 1 B1 6 pieces, up to 7x3mm; ~20-30% thickness is well preserved squamous mucosa 8.7 Esophagus Esophagus - Mucosa 0006920 250 1148 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.988911 286871 0.973018 0.990476 0.81757 22383 1 76 0.00233414 144 0 7.1837e+07 0.0266028 245133 7.25278e+07 5.2552e+06 22398 3.57667e+07 0 0.155448 0.990476 0.809783 7.1837e+07 0.00306917 1.61117e+07 1.26623e+07 1.62173e+07 161 1.62411e+07 1.42194e+07 0.00270107 1.61987e+07 49.9346 0.00337985 0.99204 0 50.1633 GTEX-X15G-0926-SM-4PQZE 1 B1 6 pieces, up to 7.5x4mm; all muscularis, good specimens 8.8 Esophagus Esophagus - Muscularis 0004648 248 1151 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.988476 303083 0.972976 0.990531 0.821723 22060 1 76 0.00202295 163 0 7.27652e+07 0.0267567 395785 7.34608e+07 3.4796e+06 22080 3.62014e+07 0 0.151252 0.990531 0.813942 7.27652e+07 0.00292316 1.57807e+07 7.56085e+06 1.59034e+07 181 1.59215e+07 1.29326e+07 0.00247212 1.59041e+07 49.9726 0.0053877 0.992585 0 50.1937 GTEX-X15G-1026-SM-4PQZF 1 B1 6 pieces, up to 8x2mm; all muscularis; good specimens 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 243 1156 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.98932 308492 0.969989 0.991172 0.808031 22160 1 76 0.00227278 136 0 6.3708e+07 0.0297793 381683 6.42754e+07 4.47507e+06 22179 3.17059e+07 0 0.161958 0.991172 0.800898 6.3708e+07 0.00305172 1.36962e+07 7.41238e+06 1.38197e+07 149 1.38321e+07 1.04085e+07 0.00266152 1.37959e+07 49.9346 0.00593825 0.993025 0 50.2244 GTEX-X15G-1126-SM-4PQZG 1 B1 6 pieces, up to 6x2mm; extremely well preserved mucsoa, delineated, 30-90% of thickness 7.3 Stomach Stomach 0000945 260 1140 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.979333 153209 0.980656 0.981105 0.842149 21195 1 76 0.00234992 289 0 5.7627e+07 0.0191607 872120 5.87369e+07 2.7766e+06 21204 2.86786e+07 0 0.138506 0.981105 0.826237 5.7627e+07 0.00323933 1.32733e+07 6.34519e+07 1.35088e+07 188 1.3519e+07 1.39804e+07 0.00279382 1.33604e+07 49.7051 0.0148479 0.982877 0 50.4397 GTEX-X15G-1326-SM-4PQZJ 1 B1 6 pieces, up to 5x3mm; ~10-20% thickness is fairly well-preserved mucosa 8 Colon Colon - Transverse 0001157 263 1137 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.988715 240241 0.972426 0.990936 0.814644 22436 1 76 0.00232489 126 0 5.28208e+07 0.0258643 518594 5.33039e+07 2.41529e+06 22452 2.62408e+07 0 0.157783 0.990936 0.80726 5.28208e+07 0.00311848 1.17153e+07 7.43229e+06 1.18268e+07 131 1.18467e+07 8.10312e+06 0.0027208 1.18007e+07 49.9026 0.009729 0.993156 0 50.237 GTEX-X15G-1426-SM-4PQZK 1 B1 6 pieces, up to 6.5x2.5mm; abundant mucosa, only focal lymphoid aggregates <5% total, delineated 8.6 Small Intestine Small Intestine - Terminal Ileum 0001211 271 1130 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.985339 267721 0.96236 0.986917 0.7501 24474 1 76 0.00249074 118 0 6.19614e+07 0.0360823 160513 6.27828e+07 2.82484e+06 24502 3.0789e+07 0 0.21226 0.986917 0.740286 6.19614e+07 0.00327728 1.36184e+07 8.78362e+06 1.36915e+07 132 1.37301e+07 1.01146e+07 0.00288338 1.36746e+07 49.8988 0.00255664 0.988494 0 50.1339 GTEX-X15G-1526-SM-4PQZM 1 B1 6 pieces, up to 8.5x4mm; ~90% muscle/fat, rest is well preserved mucosa 6.2 Colon Colon - Sigmoid 0001159 300 1101 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987346 269942 0.968422 0.989447 0.793439 22201 1 76 0.00216935 121 0 5.656e+07 0.031383 395151 5.71633e+07 2.68828e+06 22217 2.81273e+07 0 0.174983 0.989447 0.785065 5.656e+07 0.00306559 1.22713e+07 6.43374e+06 1.24313e+07 138 1.24211e+07 8.40863e+06 0.00261652 1.23989e+07 49.9551 0.00691267 0.991547 0 50.3239 GTEX-X15G-1626-SM-3NMB3 1 B1 2 pieces, 9x7 & 7x7mm; atorphic TDLUs present, rep ones delineated 6.9 Breast Breast - Mammary Tissue 0008367 328 1074 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988171 546580 0.957195 0.990822 0.747777 26075 1 76 0.00309626 170 0 8.92516e+07 0.0423619 287509 9.00783e+07 1.10589e+07 26121 4.43685e+07 0 0.209418 0.990822 0.740914 8.92516e+07 0.0046197 1.93509e+07 1.58171e+07 1.94569e+07 195 1.9481e+07 1.39422e+07 0.00385594 1.95599e+07 50.1011 0.00319177 0.993473 0 50.1366 GTEX-X15G-1726-SM-4PQZN 1 B1 2 pieces, 10.5x10 & 9x8mm; small (0.5--2mm) serous cystadenomas in one aliquot, delineated 7.5 Ovary Ovary 0000992 303 1100 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987362 275977 0.968071 0.989579 0.752069 23116 1 76 0.00208129 126 0 5.9711e+07 0.0316628 77202 6.03398e+07 2.79307e+06 23148 2.96905e+07 0 0.216002 0.989579 0.744232 5.9711e+07 0.00291337 1.31655e+07 7.66288e+06 1.3253e+07 128 1.32896e+07 1.0631e+07 0.0024964 1.32604e+07 49.9449 0.00127945 0.991795 0 50.1656 GTEX-X15G-1926-SM-4PQZQ 1 B1 6 pieces, up to 9x5mm; atrophic squamous mucosa is <1% thickness 7.3 Vagina Vagina 0000996 315 1088 BP-30525 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.986074 239673 0.970501 0.988701 0.762811 23224 1 76 0.00218879 117 0 5.38805e+07 0.029146 135832 5.44962e+07 2.59341e+06 23244 2.67774e+07 0 0.20769 0.988701 0.754192 5.38805e+07 0.00309296 1.19682e+07 6.26535e+06 1.2048e+07 116 1.21026e+07 9.50795e+06 0.00263967 1.20509e+07 49.8929 0.0024925 0.991329 0 50.1661 GTEX-X15G-2126-SM-4PQZR 0 B1 4 pieces, up to 2x2mm; excellent specimens, well preserved, 2 of 4 have ~40% fat/fibrous tissue, delineated 8.1 Salivary Gland Minor Salivary Gland 0006330 334 1070 BP-30525 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.987791 319227 0.968436 0.99007 0.774639 24638 1 76 0.00255967 171 0 7.42482e+07 0.0303034 177992 7.49929e+07 5.50772e+06 24668 3.69056e+07 0 0.193797 0.99007 0.766946 7.42482e+07 0.00326252 1.65445e+07 1.29402e+07 1.66206e+07 168 1.66953e+07 1.27303e+07 0.00291028 1.66332e+07 49.9069 0.00237345 0.992349 0 50.1147 GTEX-X15G-2326-SM-4PQZS 0 B1 2 pieces, 12x8.5 & 12x9mm; 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 362 1043 BP-30589 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.984823 258259 0.971371 0.987267 0.835031 21427 1 76 0.0020582 133 0 5.75765e+07 0.028411 277567 5.8319e+07 2.79354e+06 21439 2.8633e+07 0 0.136341 0.987267 0.824398 5.75765e+07 0.00298804 1.25316e+07 7.46329e+06 1.27018e+07 145 1.27096e+07 9.82541e+06 0.00252197 1.26617e+07 49.9057 0.00475946 0.989712 0 50.3371 GTEX-X15G-2526-SM-4PQZT 0 B1 2 pieces, 5x3 & 6x3mm; good clean specimens, adherent fat 5.8 Nerve Nerve - Tibial 0001323 367 1039 BP-30589 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.98733 269734 0.963309 0.988811 0.798548 22704 1 76 0.00208478 133 0 5.87854e+07 0.0364794 207903 5.94506e+07 4.14991e+06 22725 2.9272e+07 0 0.164761 0.988811 0.789613 5.87854e+07 0.00286348 1.28221e+07 7.33172e+06 1.28815e+07 146 1.28533e+07 9.13492e+06 0.00247355 1.29398e+07 50.1676 0.00349707 0.990293 0 50.1156 GTEX-X261-0002-SM-3PYKS B1 Blood Whole Blood 0013756 659 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R02C01 GTEX-X261-0002-SM-3PZ7E B1 Blood Whole Blood 0013756 659 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340004_R02C01 GTEX-X261-0002-SM-3USR3 B1 Blood Whole Blood 0013756 659 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-X261-0002-SM-5URDP B1 Blood Whole Blood 0013756 659 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X261-0005-SM-4PQYX B1 8.7 Blood Whole Blood 0013756 659 BP-29189 RNA isolation_PAXgene Blood RNA (Manual) 08/10/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.964189 313868 0.981618 0.965887 0.799221 17947 1 76 0.00220416 86 0 7.04377e+07 0.0171875 79706 7.29255e+07 3.52958e+06 17951 3.50089e+07 0 0.182398 0.965887 0.771957 7.04377e+07 0.00325744 1.65977e+07 1.02903e+08 1.67914e+07 115 1.6815e+07 1.90682e+07 0.00272987 1.67034e+07 49.8337 0.00109298 0.967584 0 50.29 GTEX-X261-0008-SM-4PR11 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 743 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.990321 324555 0.974731 0.99204 0.854878 19334 1 76 0.00175043 131 0 5.47833e+07 0.0249337 239368 5.52229e+07 2.41517e+06 19345 2.72677e+07 0 0.119853 0.99204 0.848073 5.47833e+07 0.00253311 1.22618e+07 8.38019e+06 1.23268e+07 118 1.23783e+07 1.39542e+07 0.00214109 1.23022e+07 49.8458 0.00433458 0.993759 0 50.1323 GTEX-X261-0011-R10B-SM-4E3JT B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986061 762687 0.959451 0.989865 0.840664 23756 1 76 0.00269262 370 0 9.51874e+07 0.0403511 6.96201e+06 9.6162e+07 1.07308e+07 23772 4.72712e+07 0 0.118786 0.989865 0.832144 9.51874e+07 0.00423297 2.06547e+07 2.60346e+07 2.10041e+07 380 2.07704e+07 8.12485e+06 0.00345984 2.12188e+07 50.534 0.0723988 0.993669 0 50.4193 GTEX-X261-0011-R10B-SM-CYKUO B1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 RIP-Seq GTEX-X261-0011-R11A-SM-4E3JY B1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986571 773701 0.947515 0.990135 0.752843 24083 1 76 0.00284859 271 0 9.69182e+07 0.0520592 1.81266e+06 9.78838e+07 1.18246e+07 24119 4.81248e+07 0 0.194672 0.990135 0.745416 9.69182e+07 0.00403599 2.08567e+07 1.75404e+07 2.10125e+07 276 2.11791e+07 1.21821e+07 0.00344015 2.1013e+07 49.8031 0.0185185 0.9937 0 50.186 GTEX-X261-0011-R5A-SM-3NMB4 B1, A1 6.6 Brain Brain - Caudate (basal ganglia) 0001873 727 BP-30585 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.984111 611779 0.963567 0.986659 0.843368 23395 1 76 0.0030076 369 0 9.63632e+07 0.0362315 8.531e+06 9.76661e+07 1.18374e+07 23413 4.79295e+07 0 0.1202 0.986659 0.832117 9.63632e+07 0.00455248 2.12712e+07 2.66744e+07 2.12737e+07 370 2.10081e+07 8.55219e+06 0.00377805 2.17739e+07 50.8951 0.0873487 0.989208 0 50.0029 GTEX-X261-0011-R6B-SM-4E3J8 B1, A1 5.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.984939 698022 0.968287 0.988918 0.856954 22020 1 76 0.00285065 368 0 9.38501e+07 0.0315906 1.15481e+07 9.49017e+07 1.02841e+07 22032 4.65848e+07 0 0.111333 0.988918 0.847457 9.38501e+07 0.00459445 2.05773e+07 3.18077e+07 2.07984e+07 381 2.06506e+07 6.26925e+06 0.00371904 2.1041e+07 50.4683 0.121685 0.992898 0 50.2672 GTEX-X261-0011-R7A-SM-4E3JJ B1, A1 6.3 Brain Brain - Putamen (basal ganglia) 0001874 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98637 560193 0.971248 0.990083 0.851919 21593 1 76 0.00282158 370 0 9.14785e+07 0.0286262 1.07799e+07 9.23948e+07 1.04222e+07 21607 4.54487e+07 0 0.119329 0.990083 0.84347 9.14785e+07 0.00407318 2.00211e+07 3.38429e+07 2.02419e+07 365 2.00485e+07 5.97694e+06 0.00344503 2.04954e+07 50.5511 0.116673 0.993795 0 50.2741 GTEX-X261-0011-R8A-SM-4E3I5 B1, A1 7.4 Brain Brain - Hypothalamus 0001898 727 BP-35959 RNA isolation_PAXgene Tissue miRNA 02/11/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986751 907316 0.962089 0.99011 0.847922 24889 1 76 0.00255717 275 0 9.42114e+07 0.0375072 3.143e+06 9.51524e+07 1.00496e+07 24908 4.68068e+07 0 0.114167 0.99011 0.839536 9.42114e+07 0.0037907 2.08342e+07 1.99328e+07 2.09351e+07 326 2.1005e+07 1.43336e+07 0.00317184 2.10814e+07 50.0907 0.0330312 0.99347 0 50.1208 GTEX-X261-0126-SM-3NMD6 1 B1 6 pieces, up to 6x2mm; subcutaneous fat well trimmed 8 Skin Skin - Sun Exposed (Lower leg) 0004264 741 1067 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.991838 660684 0.968649 0.993675 0.790852 24574 1 76 0.00285423 303 0 1.18063e+08 0.0310723 636767 1.18814e+08 1.2616e+07 24614 5.87916e+07 0 0.177797 0.993675 0.78585 1.18063e+08 0.00403341 2.57115e+07 2.09548e+07 2.58384e+07 319 2.58986e+07 2.05108e+07 0.00344273 2.58578e+07 49.9605 0.00535935 0.995513 0 50.1231 GTEX-X261-0226-SM-3NMD2 1 B1 2 pieces, 8x5 & 8x5mm; no artifacts 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 749 1060 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988736 459031 0.971222 0.991441 0.797776 23778 1 76 0.00290903 281 0 9.96498e+07 0.0284633 648758 1.0051e+08 1.26086e+07 23822 4.95378e+07 0 0.173446 0.991441 0.790948 9.96498e+07 0.00430365 2.18946e+07 1.56352e+07 2.19573e+07 290 2.20194e+07 1.66968e+07 0.00360444 2.2095e+07 50.0858 0.00645465 0.994146 0 50.0716 GTEX-X261-0326-SM-3NMD4 1 B1 2 pieces, 8x5 & 5x3mm; no significant adipose tissue 8.4 Muscle Muscle - Skeletal 0011907 754 1055 BP-29824 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990302 377738 0.977468 0.992439 0.87032 20280 1 76 0.00263517 389 0 1.05069e+08 0.022262 1.10114e+06 1.0587e+08 1.25584e+07 20293 5.23131e+07 0 0.107149 0.992439 0.863739 1.05069e+08 0.00395822 2.28125e+07 2.13409e+07 2.28978e+07 345 2.2928e+07 2.06966e+07 0.00329527 2.29928e+07 50.0706 0.0104009 0.994575 0 50.0933 GTEX-X261-0526-SM-4PQYS 1 B1 2 pieces, 4x3.5 & 4x4mm; small foci of peripheral adipose 5.9 Blood Vessel Artery - Tibial 0007610 760 1051 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.987291 254943 0.970884 0.989035 0.776352 22351 1 76 0.00231115 133 0 6.2298e+07 0.0287834 315964 6.29887e+07 4.1555e+06 22371 3.0976e+07 0 0.194532 0.989035 0.76784 6.2298e+07 0.00327932 1.36031e+07 7.75699e+06 1.37081e+07 146 1.37089e+07 1.0464e+07 0.00279438 1.37155e+07 50.0119 0.0050162 0.990779 0 50.1922 GTEX-X261-0626-SM-3NMD9 1 B1 2 pieces, 8x4 & 9x4mm; 1 fibroadipose; 1 gynecomastia with fibrosis and ducts 6.5 Breast Breast - Mammary Tissue 0008367 829 982 BP-29826 RNA isolation_PAXgene Tissue miRNA 08/21/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.987464 275686 0.975843 0.989968 0.805397 23410 1 76 0.00290796 209 0 9.19207e+07 0.0238171 440445 9.28521e+07 1.15935e+07 23442 4.5712e+07 0 0.170446 0.989968 0.797317 9.19207e+07 0.00424341 2.03916e+07 1.17193e+07 2.04712e+07 242 2.05147e+07 1.54942e+07 0.003574 2.05717e+07 50.0694 0.00474351 0.992473 0 50.0974 GTEX-X261-0726-SM-EZ6MH 2 B1 2 pieces, 11x9 & 9x6mm; 5.8 Thyroid Thyroid 0002046 829 983 BP-29929 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986517 286829 0.964364 0.987956 0.778332 24052 1 76 0.00247056 208 0 8.47865e+07 0.035325 397203 8.58201e+07 6.33282e+06 24085 4.22304e+07 0 0.186032 0.987956 0.768959 8.47865e+07 0.00375185 1.85198e+07 9.83919e+06 1.85427e+07 203 1.85416e+07 1.48961e+07 0.00311027 1.86411e+07 50.1337 0.00462832 0.989396 0 50.0308 GTEX-X261-0926-SM-3NMCY 1 B1 2 pieces, 6x4 & 6x3mm; smaller has fibrous nodule ~25% 6.7 Heart Heart - Atrial Appendage 0006631 836 978 BP-29929 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990238 396323 0.972606 0.992746 0.786545 24047 1 76 0.00299708 268 0 1.02784e+08 0.0271547 3.01451e+06 1.03535e+08 1.27119e+07 24078 5.11284e+07 0 0.186061 0.992746 0.780839 1.02784e+08 0.0044119 2.2586e+07 1.55446e+07 2.2633e+07 324 2.26552e+07 1.40098e+07 0.0037027 2.2812e+07 50.1724 0.0291158 0.995254 0 50.052 GTEX-X261-1026-SM-3NMDL 3 B1 2 pieces, 6x6 & 6x3mm; 6.2 Lung Lung 0008952 841 974 BP-29929 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989623 308615 0.972983 0.992075 0.784021 24411 1 76 0.00297618 211 0 9.46502e+07 0.0266283 223051 9.54063e+07 1.19625e+07 24441 4.70578e+07 0 0.188962 0.992075 0.777807 9.46502e+07 0.00435051 2.0916e+07 1.43524e+07 2.09614e+07 226 2.10187e+07 1.69376e+07 0.00366165 2.10841e+07 50.0777 0.00233791 0.994527 0 50.0542 GTEX-X261-1426-SM-4PQZ1 1 B1 2 pieces, 8x6 & 5x5mm; no lesions 5.9 Heart Heart - Left Ventricle 0006566 850 968 BP-29931 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.986685 126753 0.985661 0.988894 0.868991 17482 1 76 0.00234609 185 0 5.47288e+07 0.0143097 4.48873e+06 5.53434e+07 2.51343e+06 17483 2.72377e+07 0 0.11667 0.988894 0.85934 5.47288e+07 0.00331014 1.20704e+07 1.87901e+07 1.246e+07 204 1.22331e+07 1.886e+06 0.00282704 1.23697e+07 50.2776 0.0811068 0.991104 0 50.794 GTEX-X261-1726-SM-4PQYT 1 B1 2 pieces, 6.5x6 & 6x6mm; no lesions 5.8 Liver Liver 0001114 858 963 BP-29931 RNA isolation_PAXgene Tissue miRNA 08/22/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987357 215111 0.970113 0.989378 0.834006 20026 1 76 0.00217322 120 0 5.29520e+07 0.0296946 875754 5.35205e+07 2.46045e+06 20035 2.63404e+07 0 0.136107 0.989378 0.825147 5.29520e+07 0.0030835 1.15586e+07 8.85016e+06 1.16861e+07 148 1.16745e+07 6.16266e+06 0.00262743 1.16678e+07 49.9858 0.016363 0.9914 0 50.2743 GTEX-X261-2326-SM-4PQYU 2 B1 2 pieces, 6x4 & 6x5mm; reduced sperm maturation 6.2 Testis Testis 0000473 891 937 BP-29989 RNA isolation_PAXgene Tissue miRNA 08/23/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.986044 242280 0.931579 0.987905 0.726217 30804 1 76 0.00222177 123 0 5.49154e+07 0.0681825 815370 5.55878e+07 2.44671e+06 30839 2.73135e+07 0 0.205361 0.987905 0.717434 5.49154e+07 0.00309191 1.14906e+07 7.91357e+06 1.16402e+07 123 1.16642e+07 7.60238e+06 0.00265602 1.15629e+07 49.7821 0.0146682 0.989767 0 50.3234 GTEX-X261-2426-SM-4PQZU 1 B1 3 pieces, up to 3x2mm; severe gland atrophy and duct dilatation in one, moderate in 2nd, 3rd piece OK; very good dissection 7.5 Salivary Gland Minor Salivary Gland 0006330 894 935 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.986709 274270 0.971354 0.988493 0.785567 23460 1 76 0.00261108 209 0 7.40231e+07 0.0275826 192135 7.48847e+07 5.53516e+06 23488 3.68042e+07 0 0.185787 0.988493 0.776528 7.40231e+07 0.0034399 1.65842e+07 1.29547e+07 1.67452e+07 182 1.67779e+07 1.20533e+07 0.00302474 1.66799e+07 49.8536 0.00256574 0.990278 0 50.2416 GTEX-X261-3126-SM-4PQZC 2 B1 2 pieces, 6x5 & 5x4mm; good Purkinje cells 5.8 Brain Brain - Cerebellum 0002037 990 845 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987284 438605 0.940596 0.989138 0.7299 22544 1 76 0.00228765 124 0 5.93121e+07 0.0591205 1.03005e+06 5.99635e+07 2.71726e+06 22561 2.94963e+07 0 0.210695 0.989138 0.721972 5.93121e+07 0.00315118 1.27178e+07 1.44657e+07 1.28525e+07 140 1.2876e+07 6.58615e+06 0.00271861 1.27996e+07 49.8513 0.017178 0.990991 0 50.2634 GTEX-X261-3226-SM-3NMC3 2 B1 2 pieces, 6x4 & 8x7mm; anterior pituitary 6.6 Pituitary Pituitary 0000007 979 857 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988381 779087 0.947929 0.99112 0.753811 25805 1 76 0.00300966 163 0 8.96204e+07 0.0517844 731314 9.04234e+07 1.12698e+07 25850 4.45541e+07 0 0.194119 0.99112 0.747117 8.96204e+07 0.00457388 1.86685e+07 2.5319e+07 1.87917e+07 194 1.88521e+07 1.43261e+07 0.00378961 1.88544e+07 50.0031 0.00808767 0.993858 0 50.1645 GTEX-X3Y1-0001-SM-4PQYP B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -35 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.987865 377830 0.964429 0.989398 0.803788 19371 1 76 0.00240082 107 0 5.22174e+07 0.0350116 271649 5.27769e+07 2.36368e+06 19386 2.5982e+07 0 0.160642 0.989398 0.795266 5.22174e+07 0.00319539 1.15379e+07 9.53407e+06 1.16863e+07 105 1.17256e+07 1.20318e+07 0.00279749 1.1579e+07 49.6855 0.00514711 0.990931 0 50.3194 GTEX-X3Y1-0002-SM-3PYKJ B1 Blood Whole Blood 0013756 -35 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R06C02 GTEX-X3Y1-0002-SM-3PZ85 B1 Blood Whole Blood 0013756 -35 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340001_R04C01 GTEX-X3Y1-0002-SM-3USRG B1 Blood Whole Blood 0013756 -35 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 LCSET-2654,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) WES GTEX-X3Y1-0002-SM-5URCV B1 Blood Whole Blood 0013756 -35 BP-29170 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/10/2012 LCSET-5270,LCSET-5433 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X3Y1-0006-SM-3P5ZG B1 8.2 Blood Whole Blood 0013756 -35 BP-29189 RNA isolation_PAXgene Blood RNA (Manual) 08/10/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.938945 908385 0.956989 0.960172 0.779046 19631 1 76 0.00391028 128 0 9.79424e+07 0.0415015 219424 1.02005e+08 1.35312e+07 19643 4.77161e+07 0 0.177944 0.960172 0.748018 9.79424e+07 0.00558905 2.13993e+07 1.20373e+08 2.1657e+07 157 2.25773e+07 2.25021e+07 0.00473111 2.24531e+07 49.8621 0.00215111 0.981399 0 50.2993 GTEX-X3Y1-0008-SM-4PR12 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 175 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.989605 334346 0.977515 0.991284 0.852966 20222 1 76 0.00196061 151 0 6.96445e+07 0.0221124 241534 7.02569e+07 3.19687e+06 20237 3.46605e+07 0 0.12455 0.991284 0.845531 6.96445e+07 0.00273416 1.5539e+07 8.35173e+06 1.56186e+07 148 1.56703e+07 1.74665e+07 0.00234673 1.56029e+07 49.8923 0.00343787 0.992963 0 50.1278 GTEX-X3Y1-0126-SM-4PQZA 1 B1 2 pieces, 8.5x7 & 9x9mm; numerous giant cell granulomas, some with asteroid bodies c/w sarcoidosis 6.4 Spleen Spleen 0002106 156 874 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.985253 300262 0.958058 0.987695 0.747548 23436 1 76 0.00273149 115 0 5.74334e+07 0.041103 346568 5.81489e+07 2.68087e+06 23460 2.85314e+07 0 0.21051 0.987695 0.738349 5.74334e+07 0.0036933 1.25242e+07 8.74282e+06 1.2646e+07 126 1.26833e+07 8.37908e+06 0.00321121 1.26218e+07 49.8785 0.00596001 0.990138 0 50.242 GTEX-X3Y1-0226-SM-3P5Z5 0 B1 2 pieces, 10x10 & 11x7mm; 7.1 Heart Heart - Atrial Appendage 0006631 182 849 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.953032 521248 0.971878 0.974568 0.848997 22376 1 76 0.00333924 269 0 1.03317e+08 0.0278682 2.45545e+06 1.06013e+08 1.33079e+07 22392 5.04316e+07 0 0.122881 0.974568 0.827405 1.03317e+08 0.00466757 2.1598e+07 2.1589e+07 2.17436e+07 307 2.24718e+07 1.68246e+07 0.00398873 2.27804e+07 50.3409 0.0231618 0.996104 0 50.168 GTEX-X3Y1-0326-SM-4PQZ7 1 B1 6 pieces, up to 9x4mm; 2mm wall and about 1 mm extraneous adipose; no plaques 7.3 Blood Vessel Artery - Aorta 0001496 167 864 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.984714 217538 0.971318 0.986802 0.822566 20894 1 76 0.00220815 121 0 5.46495e+07 0.0282619 142429 5.53805e+07 2.4276e+06 20910 2.7177e+07 0 0.148752 0.986802 0.811709 5.46495e+07 0.00303812 1.18382e+07 5.13361e+06 1.1923e+07 127 1.19537e+07 1.01411e+07 0.00262226 1.19196e+07 49.9284 0.00257183 0.988889 0 50.1784 GTEX-X3Y1-0426-SM-3P5Z4 1 B1 2 pieces, 9x5 & 9x7mm; muscle without extraneous adipose 8.1 Heart Heart - Left Ventricle 0006566 189 843 BP-30273 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952443 535170 0.976248 0.974347 0.847209 21328 1 76 0.00349649 267 0 9.13417e+07 0.0235126 2.36137e+06 9.37465e+07 1.23788e+07 21341 4.45652e+07 0 0.129039 0.974347 0.825476 9.13417e+07 0.00489014 1.95051e+07 2.39837e+07 1.95869e+07 265 2.02079e+07 1.45156e+07 0.00417765 2.06334e+07 50.521 0.0251889 0.996252 0 50.1047 GTEX-X3Y1-0626-SM-3P5YS 1 B1 2 pieces, 9.5x6 & 10x7mm; giant cell granulomas and interstitial fibrosis c/w sarcoidosis (clinical history of sarcoid) 7.8 Lung Lung 0008952 185 848 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.94934 424262 0.964609 0.971182 0.757869 26071 1 76 0.00391312 166 0 9.26111e+07 0.0337456 319151 9.53592e+07 1.27822e+07 26115 4.5075e+07 0 0.20674 0.971182 0.736028 9.26111e+07 0.00537197 1.98799e+07 1.32388e+07 2.00276e+07 191 2.09073e+07 1.47425e+07 0.00462614 2.0848e+07 49.929 0.00334683 0.993023 0 50.1851 GTEX-X3Y1-0726-SM-3P5YU 1 B1 2 pieces, 12x10 & 11x11mm; 20% intraglandular adipose 6.2 Pancreas Pancreas 0001150 180 853 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.95153 344223 0.976979 0.973507 0.845585 21772 1 76 0.00359224 103 0 8.89036e+07 0.0226009 460283 9.13231e+07 1.18898e+07 21792 4.33474e+07 0 0.131394 0.973507 0.823182 8.89036e+07 0.00511237 1.99647e+07 3.37277e+07 2.0224e+07 127 2.09879e+07 2.6001e+07 0.00433514 2.10784e+07 50.1077 0.00504016 0.995483 0 50.3226 GTEX-X3Y1-0926-SM-3P5YT 0 B1 2 pieces, 7.5x6 & 8x7mm; no artifacts 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 177 858 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951129 479979 0.96962 0.973123 0.822837 23443 1 76 0.00328526 158 0 7.6338e+07 0.0299519 429883 7.84464e+07 1.00662e+07 23466 3.7214e+07 0 0.146783 0.973123 0.800722 7.6338e+07 0.00477714 1.63713e+07 1.06144e+07 1.64857e+07 172 1.71711e+07 1.31498e+07 0.00401434 1.72165e+07 50.0661 0.00547996 0.995117 0 50.1741 GTEX-X3Y1-1126-SM-4PQZ9 1 B1 6 pieces, up to 9x5mm; good pure muscularis propria in all 8.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 169 866 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.98747 313053 0.974414 0.98946 0.828437 21673 1 76 0.00242467 162 0 7.24102e+07 0.0252619 667781 7.31815e+07 5.15514e+06 21686 3.60356e+07 0 0.145977 0.98946 0.819705 7.24102e+07 0.00314449 1.56445e+07 8.7687e+06 1.57752e+07 179 1.57264e+07 1.22832e+07 0.00278386 1.58306e+07 50.1651 0.00912499 0.991451 0 50.2079 GTEX-X3Y1-1226-SM-4PQZ8 1 B1 6 pieces, up to 8x3mm; good pure muscularis propria in all 8.8 Esophagus Esophagus - Muscularis 0004648 150 886 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.986061 296604 0.975938 0.987568 0.842345 20938 1 76 0.00219066 134 0 6.40479e+07 0.0237192 569387 6.48542e+07 2.76196e+06 20948 3.18787e+07 0 0.133594 0.987568 0.831872 6.40479e+07 0.00296337 1.37255e+07 6.80168e+06 1.38508e+07 150 1.38193e+07 1.18186e+07 0.00257642 1.38492e+07 50.0541 0.00877949 0.989074 0 50.2272 GTEX-X3Y1-1326-SM-4PQZB 0 B1 6 pieces, up to 7x3mm; well preserved mucosa with prominent muscularis mucosae and fibrotic submucosa; most have parts of UNWANTED muscularis propria (see annotated image) 9.8 Esophagus Esophagus - Mucosa 0006920 153 883 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.983465 273945 0.973479 0.985524 0.830662 20812 1 76 0.00224248 133 0 5.74004e+07 0.0259992 279579 5.82436e+07 2.66362e+06 20824 2.85549e+07 0 0.142817 0.985524 0.818637 5.74004e+07 0.00309745 1.29329e+07 9.46257e+06 1.30209e+07 131 1.30579e+07 1.16783e+07 0.00266907 1.3011e+07 49.91 0.00480017 0.987582 0 50.1695 GTEX-X3Y1-1726-SM-4PQZL 1 B1 6 pieces, up to 7.5x4mm; focally sloughed glands 8.6 Colon Colon - Transverse 0001157 217 822 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.988959 312960 0.970459 0.990943 0.812721 22991 1 76 0.00239628 145 0 6.32141e+07 0.0284274 613153 6.37919e+07 2.71118e+06 23012 3.14332e+07 0 0.157738 0.990943 0.80536 6.32141e+07 0.00305714 1.382e+07 9.01916e+06 1.3919e+07 150 1.39275e+07 1.0074e+07 0.00272605 1.39299e+07 50.0043 0.00961176 0.992926 0 50.1784 GTEX-X3Y1-1926-SM-4PQZO 1 B1 1 piece, 7x3mm; well dissected, well preserved; 10% intraglandular adipose 7.8 Salivary Gland Minor Salivary Gland 0006330 168 872 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.98594 306006 0.973273 0.987557 0.81841 23157 1 76 0.00316667 222 0 7.58554e+07 0.0244979 336508 7.68111e+07 5.49107e+06 23184 3.76827e+07 0 0.154863 0.987557 0.808227 7.58554e+07 0.00401221 1.72493e+07 2.39025e+07 1.73682e+07 196 1.74033e+07 1.28158e+07 0.00358875 1.73346e+07 49.9011 0.00438098 0.989175 0 50.1717 GTEX-X3Y1-2026-SM-3P5YM 1 B1 6 pieces, up to 10x4mm; too much subcutaneous adipose (up to 1 mm) 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 176 865 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.942054 623773 0.962031 0.964016 0.792694 25039 1 76 0.00342201 222 0 9.65966e+07 0.0377333 812176 1.00202e+08 1.28753e+07 25067 4.70906e+07 0 0.169337 0.964016 0.764169 9.65966e+07 0.00498395 2.0638e+07 2.02686e+07 2.07357e+07 235 2.1573e+07 1.5532e+07 0.00418519 2.1751e+07 50.2054 0.00810537 0.985979 0 50.1181 GTEX-X3Y1-2426-SM-3P5Z7 0 B1 2 pieces, 4x3 & 5x3mm; minimal external adipose 6.4 Nerve Nerve - Tibial 0001323 196 847 BP-30589 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949644 613616 0.957984 0.971774 0.724159 25547 1 76 0.00336042 222 0 1.02915e+08 0.0417514 464298 1.05904e+08 1.38679e+07 25606 5.01306e+07 0 0.233825 0.971774 0.703719 1.02915e+08 0.00493544 2.20002e+07 1.69522e+07 2.2044e+07 237 2.29959e+07 1.41032e+07 0.00413 2.31302e+07 50.1455 0.00438415 0.993905 0 50.0496 GTEX-X3Y1-2626-SM-4PQZI 1 B1 2 pieces, 11x9 & 13x9mm; adequate spermatogenesis; focal tubular atrophy/fibrosis up to 3x1mm c/w microinfarcts; 7 Testis Testis 0000473 192 852 BP-30589 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.985034 305212 0.928336 0.987057 0.731945 31245 1 76 0.00233012 126 0 5.88178e+07 0.0713496 471299 5.95891e+07 2.72911e+06 31285 2.92565e+07 0 0.196391 0.987057 0.722471 5.88178e+07 0.00316349 1.22023e+07 1.04028e+07 1.23035e+07 121 1.23547e+07 9.47093e+06 0.00274595 1.22604e+07 49.8085 0.00790915 0.989079 0 50.2065 GTEX-X3Y1-2726-SM-4PQZH 1 B1 2 pieces, 11x9 & 12x9mm; giant cell granulomas (history of sarcoid); capsule present up to 0.4mm thick, specimen should be sampled below capsule 8.1 Liver Liver 0001114 214 831 BP-30589 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.990103 195888 0.979715 0.9916 0.875627 19531 1 76 0.00216696 104 0 5.88087e+07 0.0176888 741526 5.93069e+07 2.56438e+06 19541 2.92149e+07 0 0.104089 0.9916 0.868272 5.88087e+07 0.00290896 1.28006e+07 9.76208e+06 1.28498e+07 129 1.2867e+07 1.37947e+07 0.0025374 1.28659e+07 49.9979 0.0125032 0.993098 0 50.0958 GTEX-X4EO-0003-SM-3PYKZ C1 Blood Whole Blood 0013756 721 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R02C02 GTEX-X4EO-0003-SM-3PZ83 C1 Blood Whole Blood 0013756 721 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8739660006_R04C01 GTEX-X4EO-0003-SM-3USRE C1 Blood Whole Blood 0013756 721 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-X4EO-0003-SM-5URCE C1 Blood Whole Blood 0013756 721 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X4EO-0004-SM-4QARM C1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 721 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.991087 649753 0.969016 0.992969 0.814985 20010 1 76 0.00192879 144 0 6.39269e+07 0.0304048 507493 6.43796e+07 3.22419e+06 20030 3.17863e+07 0 0.154031 0.992969 0.809255 6.39269e+07 0.00259542 1.42218e+07 9.78073e+06 1.43079e+07 137 1.43591e+07 1.48917e+07 0.00226148 1.42952e+07 49.8884 0.00788282 0.994851 0 50.1508 GTEX-X4EO-0006-SM-3P5ZF C1 8.8 Blood Whole Blood 0013756 721 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.946519 727320 0.96313 0.968399 0.722108 21077 1 76 0.0037945 137 0 9.03939e+07 0.0362174 210570 9.33437e+07 1.21283e+07 21103 4.4044e+07 0 0.241022 0.968399 0.699289 9.03939e+07 0.00541574 1.96911e+07 5.74911e+07 1.97956e+07 154 2.07066e+07 1.6451e+07 0.00458681 2.06383e+07 49.9173 0.00225586 0.990278 0 50.1324 GTEX-X4EO-0008-SM-4QASS C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 780 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989459 762296 0.973006 0.992251 0.827806 20641 1 76 0.00171902 148 0 6.65455e+07 0.0266235 257070 6.70652e+07 3.43137e+06 20658 3.30687e+07 0 0.1452 0.992251 0.821391 6.65455e+07 0.00248461 1.46861e+07 8.52928e+06 1.47975e+07 149 1.48719e+07 1.4459e+07 0.00210074 1.4799e+07 49.8772 0.00383313 0.995042 0 50.1889 GTEX-X4EO-0126-SM-3P5YN 1 C1 2 pieces, 5x3 & 4x3mm; up to 40% adipose externally and internally among nerve fibers 7.6 Nerve Nerve - Tibial 0001323 776 1340 BP-30679 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.948937 458257 0.957619 0.971001 0.686688 25491 1 76 0.00329521 181 0 9.15404e+07 0.0421344 375462 9.42743e+07 1.232e+07 25542 4.45954e+07 0 0.270931 0.971001 0.666775 9.15404e+07 0.00478363 1.95789e+07 1.47094e+07 1.96416e+07 191 2.04785e+07 1.1566e+07 0.00402251 2.05857e+07 50.1305 0.00398266 0.993064 0 50.08 GTEX-X4EO-0326-SM-3P5YO 2 C1 6 pieces, up to 8x2mm; well trimmed but with central holes (artifacts) 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 779 1338 BP-30679 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950123 661792 0.969035 0.972355 0.80311 24303 1 76 0.00317274 233 0 9.77348e+07 0.0306584 382140 1.00513e+08 1.28364e+07 24335 4.76214e+07 0 0.165925 0.972355 0.780908 9.77348e+07 0.00484351 2.08367e+07 1.87061e+07 2.08929e+07 235 2.18032e+07 1.71039e+07 0.00398902 2.19079e+07 50.1197 0.00380188 0.994586 0 50.0674 GTEX-X4EO-0426-SM-4QASA 1 C1 2 pieces, 8x7 & 10x5.5mm; 10% central hole in one piece 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 782 1336 BP-30679 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.987254 483043 0.975626 0.990294 0.811619 22603 1 76 0.0019795 170 0 7.66961e+07 0.0240714 309154 7.74478e+07 4.21139e+06 22629 3.81061e+07 0 0.164007 0.990294 0.803742 7.66961e+07 0.00280744 1.68538e+07 7.88449e+06 1.70192e+07 198 1.70579e+07 1.26667e+07 0.0023922 1.70455e+07 49.9818 0.00399177 0.993334 0 50.2442 GTEX-X4EO-0526-SM-3P5Z3 1 C1 2 pieces, 8x8 & 10x4mm; minimal adipose 7.7 Muscle Muscle - Skeletal 0011907 784 1334 BP-30738 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.953027 379842 0.97854 0.974496 0.858714 21512 1 76 0.00277349 273 0 1.13382e+08 0.0211966 964816 1.1635e+08 1.55035e+07 21534 5.5355e+07 0 0.119826 0.974496 0.836814 1.13382e+08 0.00412996 2.39054e+07 1.62895e+07 2.4115e+07 311 2.50832e+07 2.468e+07 0.00343679 2.50964e+07 50.0131 0.00829237 0.995965 0 50.2182 GTEX-X4EO-0926-SM-3P5Z2 2 C1 2 pieces, 10x6 & 7x7mm; emphysematous changes; giant cells c/w aspiration 6.7 Lung Lung 0008952 799 1322 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949109 541187 0.966331 0.971095 0.703796 25845 1 76 0.0035978 210 0 1.05607e+08 0.033187 253238 1.0875e+08 1.34156e+07 25905 5.14193e+07 0 0.262535 0.971095 0.683453 1.05607e+08 0.0051287 2.27026e+07 1.60084e+07 2.27333e+07 219 2.37376e+07 1.49741e+07 0.00434592 2.38297e+07 50.0968 0.00232862 0.993082 0 50.0339 GTEX-X4EO-1026-SM-4QARP 1 C1 6 pieces, up to 7.5x2mm; atheromatous plaques up to 1 mm thick; well trimmed adventitial fat 6.7 Blood Vessel Artery - Aorta 0001496 801 1320 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98844 442597 0.972235 0.990308 0.759631 21580 1 76 0.00219615 127 0 5.95723e+07 0.0272488 134240 6.01554e+07 2.88409e+06 21605 2.96115e+07 0 0.212603 0.990308 0.752269 5.95723e+07 0.00286764 1.2868e+07 6.9625e+06 1.29331e+07 131 1.2947e+07 1.04262e+07 0.00253126 1.29719e+07 50.048 0.00223156 0.992175 0 50.1262 GTEX-X4EO-1126-SM-4QARQ 1 C1 2 pieces, 7x7 & 8x8mm; no lesions 7.1 Liver Liver 0001114 804 1318 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988743 307996 0.978056 0.991583 0.833975 19914 1 76 0.00188917 147 0 6.17209e+07 0.0218171 588085 6.22448e+07 3.27546e+06 19929 3.06718e+07 0 0.14408 0.991583 0.826956 6.17209e+07 0.00268608 1.3789e+07 7.35517e+06 1.38071e+07 177 1.37615e+07 8.03416e+06 0.00228648 1.40074e+07 50.4428 0.00944794 0.994424 0 50.0329 GTEX-X4EO-1226-SM-4QARR 1 C1 6 pieces, up to 6x2mm; good squamous epithelium 8.2 Esophagus Esophagus - Mucosa 0006920 806 1317 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989514 749902 0.971279 0.99242 0.764834 23812 1 76 0.00204038 210 0 9.63707e+07 0.0284699 247880 9.71068e+07 5.02043e+06 23846 4.78862e+07 0 0.206446 0.99242 0.759036 9.63707e+07 0.00289617 2.14845e+07 1.34659e+07 2.15666e+07 229 2.16679e+07 1.61782e+07 0.00246702 2.16691e+07 50.0013 0.00255265 0.995325 0 50.0954 GTEX-X4EO-1726-SM-4QARN 2 C1 2 pieces, 8x7 & 6x5.5mm; the smaller piece contains 80% adipose 6.7 Adrenal Gland Adrenal Gland 0002369 818 1310 BP-30732 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.987119 419904 0.973666 0.990272 0.806445 22311 1 76 0.00196067 184 0 7.10423e+07 0.0261473 1.88526e+06 7.17402e+07 3.88809e+06 22336 3.5296e+07 0 0.167221 0.990272 0.798601 7.10423e+07 0.00276246 1.55272e+07 8.34819e+06 1.5894e+07 210 1.5893e+07 8.04569e+06 0.00236029 1.57426e+07 49.7623 0.0262791 0.993426 0 50.5836 GTEX-X4EO-2426-SM-4QASD 2 C1 2 pieces, 7.5x7 & 7x7mm; atrophic with corpora albicans; 20-40% fibrovascular and adipose tissue 6.9 Ovary Ovary 0000992 832 1301 BP-31059 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989012 341464 0.969408 0.991323 0.698878 22816 1 76 0.00213639 121 0 5.37886e+07 0.0303396 92252 5.42594e+07 2.87615e+06 22848 2.67326e+07 0 0.27053 0.991323 0.692814 5.37886e+07 0.00288192 1.17942e+07 5.82319e+06 1.1855e+07 122 1.1879e+07 8.02722e+06 0.00250829 1.18979e+07 50.0398 0.0017002 0.993634 0 50.1284 GTEX-X4EO-2526-SM-EWRM8 3 C1 6 pieces, up to 9x5mm; mucosa=3; muscularis =2 5.5 Colon Colon - Transverse 0001157 835 1299 BP-31059 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.980607 300495 0.968649 0.983635 0.804856 23620 1 76 0.00247161 206 0 8.24751e+07 0.0311109 685482 8.38472e+07 6.13521e+06 23644 4.09915e+07 0 0.163793 0.983635 0.791685 8.24751e+07 0.00322096 1.7659e+07 8.41033e+06 1.79662e+07 216 1.79207e+07 1.21396e+07 0.00283637 1.79318e+07 50.0155 0.00817537 0.986663 0 50.431 GTEX-X4EO-2726-SM-4E3HS 2 C1 6 pieces, up to 6x2mm; all muscle, no mucosa (good) 5.8 Colon Colon - Sigmoid 0001159 848 1287 BP-36096 RNA isolation_PAXgene Tissue miRNA 02/13/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.984174 523379 0.965965 0.987333 0.788129 23766 1 76 0.00257394 195 0 8.49023e+07 0.033791 551927 8.59915e+07 9.20745e+06 23792 4.21757e+07 0 0.177835 0.987333 0.778146 8.49023e+07 0.00388189 1.81171e+07 1.20151e+07 1.82683e+07 209 1.82889e+07 1.27507e+07 0.00322582 1.83635e+07 50.1018 0.00641839 0.990493 0 50.2077 GTEX-X4EO-2926-SM-4E3JH 1 C1 6 pieces, up to 9x3mm; up to 2mm thick subcutaneous adipose 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 851 1285 BP-36096 RNA isolation_PAXgene Tissue miRNA 02/13/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985498 551659 0.97102 0.989005 0.768719 24209 1 76 0.00274232 185 0 8.56197e+07 0.0287247 307666 8.65716e+07 9.67056e+06 24252 4.2529e+07 0 0.202301 0.989005 0.760267 8.56197e+07 0.00389737 1.87899e+07 1.38597e+07 1.88314e+07 192 1.89256e+07 1.41924e+07 0.0033178 1.89959e+07 50.0927 0.00355389 0.992512 0 50.0551 GTEX-X4EP-0002-SM-3PYKV C1 Blood Whole Blood 0013756 1051 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R01C02 GTEX-X4EP-0002-SM-3PZ7Y C1 Blood Whole Blood 0013756 1051 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_OM5_001 11/22/2012 Illumina OMNI SNP Array OMNI 8739660006_R03C01 GTEX-X4EP-0002-SM-3USRC C1 Blood Whole Blood 0013756 1051 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-X4EP-0002-SM-5URCA C1 Blood Whole Blood 0013756 1051 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X4EP-0004-SM-4PQZX C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1051 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.986074 2.29633e+06 0.958015 0.987643 0.806708 24471 1 76 0.00241631 388 0 1.59743e+08 0.041079 1.30435e+06 1.61742e+08 7.32182e+06 24530 7.94114e+07 0 0.151307 0.987643 0.796739 1.59743e+08 0.00321544 3.5151e+07 3.33751e+07 3.54181e+07 344 3.55209e+07 3.67017e+07 0.00281524 3.52971e+07 49.842 0.00806441 0.989212 0 50.1892 GTEX-X4EP-0005-SM-3P5ZE C1 8.1 Blood Whole Blood 0013756 1051 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.923888 572009 0.978005 0.94454 0.807032 18260 1 76 0.00313333 145 0 1.13759e+08 0.0198071 194114 1.20439e+08 1.71935e+07 18266 5.5427e+07 0 0.170973 0.94454 0.762273 1.13759e+08 0.00469553 2.61126e+07 2.11914e+08 2.6753e+07 184 2.78325e+07 3.2856e+07 0.00389735 2.74205e+07 49.6272 0.00161172 0.965192 0 50.6057 GTEX-X4EP-0008-SM-4PQYO C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1104 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3735 08/31/2013 TruSeq.v1 RNASEQ 0.989351 272346 0.978331 0.991295 0.854433 19622 1 76 0.00177661 129 0 5.88132e+07 0.0213213 288886 5.93296e+07 2.69608e+06 19629 2.92652e+07 0 0.123898 0.991295 0.846995 5.88132e+07 0.00262609 1.31921e+07 7.2534e+06 1.33139e+07 126 1.33626e+07 1.48981e+07 0.00220052 1.32548e+07 49.7974 0.00486917 0.99324 0 50.2298 GTEX-X4EP-0011-R10B-SM-4QASJ C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.987899 691915 0.962849 0.990164 0.839838 23956 1 76 0.00218494 193 0 7.35215e+07 0.0367452 2.81423e+06 7.42518e+07 3.91408e+06 23977 3.65311e+07 0 0.123012 0.990164 0.831577 7.35215e+07 0.00293436 1.60376e+07 1.11499e+07 1.61666e+07 214 1.61896e+07 1.04432e+07 0.00255879 1.6183e+07 49.9897 0.0379011 0.992429 0 50.2003 GTEX-X4EP-0011-R10B-SM-CYKW5 C1, A1 7.2 Brain Brain - Frontal Cortex (BA9) 0009834 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 RIP-Seq GTEX-X4EP-0011-R11B-SM-4QASK C1, A1 7.8 Brain Brain - Cerebellar Hemisphere 0002037 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98805 736801 0.949045 0.990169 0.696936 22582 1 76 0.00249451 129 0 6.63881e+07 0.050521 506856 6.70472e+07 3.36029e+06 22608 3.29443e+07 0 0.252109 0.990169 0.690084 6.63881e+07 0.00328801 1.43962e+07 8.0351e+06 1.44615e+07 148 1.4545e+07 8.02061e+06 0.00289041 1.4445e+07 49.8276 0.00755969 0.992289 0 50.1132 GTEX-X4EP-0011-R1A-SM-3P624 C1, A1 7.2 Brain Brain - Hippocampus 0001954 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.768288 604946 0.938865 0.786256 0.754188 26776 1 76 0.00378124 167 0 8.2053e+07 0.0606785 5.16932e+06 1.04359e+08 1.4323e+07 26811 3.9941e+07 0 0.184677 0.786256 0.592985 8.2053e+07 0.0052783 1.71684e+07 2.55405e+07 1.73428e+07 181 1.81036e+07 1.184e+07 0.00451266 1.8037e+07 49.9079 0.0495339 0.804225 0 50.2527 GTEX-X4EP-0011-R2B-SM-3P625 C1, A1 7.4 Brain Brain - Substantia nigra 0002038 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 EXCLUDE 0.903848 435212 0.960502 0.925084 0.793545 25661 1 76 0.00352823 210 0 8.88879e+07 0.0391234 4.37994e+06 9.60864e+07 1.2904e+07 25693 4.32973e+07 0 0.166957 0.925084 0.734095 8.88879e+07 0.00502994 1.90218e+07 1.62492e+07 1.91164e+07 223 1.99693e+07 1.33738e+07 0.00426185 1.99807e+07 50.0143 0.0455833 0.94632 0 50.1241 GTEX-X4EP-0011-R3A-SM-3P626 C1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.6621 757265 0.91197 0.677456 0.719243 26604 1 76 0.00405176 131 0 6.72278e+07 0.0872583 3.96506e+06 9.92356e+07 1.34103e+07 26636 3.26902e+07 0 0.192726 0.677456 0.487256 6.72278e+07 0.00552772 1.36898e+07 3.09742e+07 1.37965e+07 137 1.44155e+07 9.89984e+06 0.00477301 1.43667e+07 49.9151 0.039956 0.692813 0 50.1941 GTEX-X4EP-0011-R4B-SM-3P627 C1, A1 7.1 Brain Brain - Amygdala 0001876 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.63307 707108 0.911456 0.648237 0.71247 27157 1 76 0.00416745 135 0 6.73793e+07 0.0876417 2.18616e+06 1.03942e+08 1.47898e+07 27193 3.26978e+07 0 0.198986 0.648237 0.461849 6.73793e+07 0.00579848 1.3678e+07 2.56318e+07 1.3777e+07 133 1.44374e+07 1.06658e+07 0.00496388 1.43558e+07 49.8583 0.0210324 0.663403 0 50.1804 GTEX-X4EP-0011-R5A-SM-3P628 C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 EXCLUDE 0.949357 528915 0.967253 0.970884 0.796965 26001 1 76 0.00339281 278 0 1.05672e+08 0.0322398 1.756e+06 1.08841e+08 1.33507e+07 26036 5.1514e+07 0 0.170288 0.970884 0.773761 1.05672e+08 0.00475885 2.28462e+07 1.76026e+07 2.29551e+07 290 2.40229e+07 1.84171e+07 0.00406069 2.38791e+07 49.8499 0.0161335 0.992411 0 50.1189 GTEX-X4EP-0011-R6A-SM-3P629 C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1055 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.934306 662351 0.956187 0.955302 0.792967 27241 1 76 0.00340956 278 0 1.072e+08 0.0433438 3.01267e+06 1.12216e+08 1.48621e+07 27270 5.22743e+07 0 0.163219 0.955302 0.757524 1.072e+08 0.00468157 2.28451e+07 2.30146e+07 2.30006e+07 275 2.40418e+07 1.91068e+07 0.00403159 2.38826e+07 49.8339 0.0268471 0.976299 0 50.1696 GTEX-X4EP-0011-R7B-SM-4PQZW C1, A1 8 Brain Brain - Putamen (basal ganglia) 0001874 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 EXCLUDE 0.986913 385284 0.963985 0.98864 0.818817 23734 1 76 0.00244682 205 0 7.41241e+07 0.0355106 3.17249e+06 7.49759e+07 5.6377e+06 23749 3.68882e+07 0 0.145168 0.98864 0.809516 7.41241e+07 0.00316805 1.62687e+07 1.15209e+07 1.64146e+07 212 1.64664e+07 1.19339e+07 0.00280681 1.63427e+07 49.8115 0.0423135 0.990367 0 50.2232 GTEX-X4EP-0011-R8B-SM-4QASL C1, A1 7.7 Brain Brain - Hypothalamus 0001898 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-3737,LCSET-4214 10/17/2013 TruSeq.v1 RNASEQ 0.806414 609873 0.94742 0.808501 0.753286 25598 1 76 0.00237211 134 0 6.32343e+07 0.0520882 1.13453e+06 7.82117e+07 3.83138e+06 25621 3.13489e+07 0 0.194134 0.808501 0.609033 6.32343e+07 0.00311719 1.36272e+07 1.20761e+07 1.36786e+07 149 1.37423e+07 9.38045e+06 0.00274368 1.37267e+07 49.9715 0.0145059 0.810588 0 50.0942 GTEX-X4EP-0011-R9B-SM-4QASI C1, A1 7.5 Brain Brain - Spinal cord (cervical c-1) 0006469 1055 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-3737 08/30/2013 TruSeq.v1 EXCLUDE 0.989774 687842 0.966772 0.99207 0.823645 23422 1 76 0.00223134 176 0 7.30107e+07 0.0328839 1.92864e+06 7.35943e+07 3.73536e+06 23442 3.62707e+07 0 0.143127 0.99207 0.817113 7.30107e+07 0.00301591 1.61191e+07 1.06469e+07 1.63006e+07 191 1.628e+07 1.1771e+07 0.00262272 1.6312e+07 50.0491 0.0262064 0.994367 0 50.2799 GTEX-X4EP-0126-SM-3P5YV 0 C1 6 pieces, up to 7.5x2mm; squamous epithelium is ~2% thickness 6 Skin Skin - Sun Exposed (Lower leg) 0004264 1104 1409 BP-30276 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.949896 668984 0.965935 0.972117 0.796771 25149 1 76 0.00324254 387 0 1.20831e+08 0.0338467 728261 1.24297e+08 1.67467e+07 25190 5.88912e+07 0 0.169164 0.972117 0.774555 1.20831e+08 0.00481343 2.57745e+07 2.21705e+07 2.58972e+07 342 2.69565e+07 1.97579e+07 0.00401003 2.71643e+07 50.1919 0.00585905 0.994339 0 50.1187 GTEX-X4EP-0326-SM-3P5Z6 1 C1 2 pieces, 7x7 & 8x7mm; 7.9 Heart Heart - Atrial Appendage 0006631 1119 1395 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951527 431008 0.972841 0.973703 0.801567 22677 1 76 0.00326291 268 0 9.87393e+07 0.0268742 1.99247e+06 1.01406e+08 1.355e+07 22708 4.81406e+07 0 0.171274 0.973703 0.780488 9.87393e+07 0.00475256 2.09196e+07 1.7006e+07 2.08208e+07 257 2.17053e+07 1.60364e+07 0.00399077 2.19564e+07 50.2875 0.0196485 0.995879 0 49.8817 GTEX-X4EP-0526-SM-3P5YW 2 C1 2 pieces, 8x6 & 7x7mm; emphysematous changes 7.3 Lung Lung 0008952 1127 1396 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950259 307126 0.973623 0.971896 0.780775 24385 1 76 0.00347124 208 0 9.83843e+07 0.0259089 211608 1.01229e+08 1.22458e+07 24424 4.79617e+07 0 0.192848 0.971896 0.758832 9.83843e+07 0.00484199 2.1381e+07 1.89674e+07 2.15359e+07 228 2.2482e+07 1.77361e+07 0.00414136 2.24116e+07 49.9216 0.00209038 0.993533 0 50.1805 GTEX-X4EP-0626-SM-3P621 0 C1 6 pieces, up to 7x3mm; squamous epithelium is ~1-2% thickness 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1129 1395 BP-30278 RNA isolation_PAXgene Tissue miRNA 08/28/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950494 568948 0.964425 0.972663 0.745663 25035 1 76 0.0032124 219 0 9.91034e+07 0.0353836 717428 1.01889e+08 1.3479e+07 25081 4.82969e+07 0 0.218761 0.972663 0.725278 9.91034e+07 0.00476986 2.12263e+07 1.68294e+07 2.12692e+07 228 2.21681e+07 1.48615e+07 0.00397338 2.23317e+07 50.1839 0.00704129 0.994831 0 50.0505 GTEX-X4EP-0726-SM-3P5YJ 0 C1 2 pieces, 4x2.5 & 4x2mm; reasonably clean specimens 7 Nerve Nerve - Tibial 0001323 1131 1393 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951907 487306 0.962733 0.973276 0.715307 25710 1 76 0.00325152 285 0 1.27321e+08 0.0370126 441094 1.30817e+08 1.6277e+07 25772 6.21075e+07 0 0.247426 0.973276 0.696191 1.27321e+08 0.0044741 2.73357e+07 1.96501e+07 2.75005e+07 317 2.86546e+07 1.83005e+07 0.00384939 2.86648e+07 50.0089 0.00337184 0.994644 0 50.1503 GTEX-X4EP-0826-SM-3P5YK 0 C1 2 pieces, 4x2 & 3x2.5mm; up to~0.5mm adherent fat, discontinuous, delineated 7.6 Blood Vessel Artery - Tibial 0007610 1133 1392 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.951167 543236 0.964327 0.972713 0.801089 23491 1 76 0.00321851 280 0 1.13401e+08 0.035324 469071 1.16582e+08 1.52529e+07 23522 5.53069e+07 0 0.163238 0.972713 0.77923 1.13401e+08 0.00464872 2.37731e+07 1.64294e+07 2.39483e+07 309 2.49507e+07 2.07449e+07 0.00391777 2.49593e+07 50.0087 0.00402352 0.994259 0 50.1835 GTEX-X4EP-1026-SM-4QAS5 2 C1 2 pieces, 9x8 & 8.5x8mm; diffuse macrovesicular steatosis with early cirrohsis; rep steatotic areas delineated 6.7 Liver Liver 0001114 1137 1392 BP-30509 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989021 422289 0.975723 0.991827 0.82242 20187 1 76 0.0021442 158 0 7.41303e+07 0.0241101 1.47739e+06 7.47411e+07 4.08466e+06 20207 3.68279e+07 0 0.153303 0.991827 0.815699 7.41303e+07 0.00292618 1.63231e+07 1.06239e+07 1.63959e+07 198 1.64115e+07 1.07442e+07 0.00253409 1.65074e+07 50.1457 0.0197668 0.994633 0 50.1112 GTEX-X4EP-1426-SM-4PQZP 1 C1 6 pieces, up to 8x2mm; atherosis present up to ~ 0.2mm thick 7.6 Blood Vessel Artery - Aorta 0001496 1146 1385 BP-30514 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3735,LCSET-4071 09/09/2013 TruSeq.v1 RNASEQ 0.985507 272707 0.961849 0.987365 0.718492 22923 1 76 0.00265218 135 0 7.16875e+07 0.0377866 91228 7.26049e+07 4.87557e+06 22953 3.56085e+07 0 0.243357 0.987365 0.709413 7.16875e+07 0.00357186 1.53664e+07 7.275e+06 1.54439e+07 147 1.54578e+07 1.12639e+07 0.00311116 1.54857e+07 50.045 0.0012565 0.989222 0 50.1257 GTEX-X4EP-1626-SM-4QAS6 2 C1 6 pieces, up to 6x2mm; squamous mucosa is partly sloughing, ~20-30% thickness 6.2 Esophagus Esophagus - Mucosa 0006920 1150 1382 BP-30525 RNA isolation_PAXgene Tissue miRNA 09/04/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.950621 516793 0.951522 0.952558 0.689271 22150 1 76 0.00299514 140 0 7.268e+07 0.0482815 815079 7.62998e+07 4.09651e+06 22187 3.60263e+07 0 0.262251 0.952558 0.65657 7.268e+07 0.00384249 1.59472e+07 1.80963e+07 1.60878e+07 164 1.60967e+07 8.24094e+06 0.00341795 1.60908e+07 49.9909 0.0106826 0.954494 0 50.2194 GTEX-X4EP-2926-SM-3P5YQ 2 C1 2 pieces, 10x8 & 10x8mm; atrophic TDLUs, gynecomastoid 6.4 Breast Breast - Mammary Tissue 0008367 1186 1401 BP-30683 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.944157 435699 0.968125 0.965426 0.765371 25432 1 76 0.00337032 278 0 1.13825e+08 0.0313381 473538 1.17901e+08 1.48032e+07 25482 5.55008e+07 0 0.202754 0.965426 0.738909 1.13825e+08 0.00468257 2.44454e+07 1.64404e+07 2.45666e+07 299 2.56185e+07 1.88077e+07 0.00401199 2.56202e+07 50.0016 0.00401639 0.986696 0 50.1237 GTEX-X4EP-3026-SM-3P5YP 1 C1 4 pieces, up to 6x6mm; Purkinje cells with ischemic changes, delineated (rep) 7.1 Brain Brain - Cerebellum 0002037 1189 1400 BP-30683 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.948471 473789 0.94519 0.970204 0.663872 24537 1 76 0.00384102 157 0 8.89169e+07 0.0544571 778373 9.16476e+07 1.2439e+07 24590 4.32867e+07 0 0.281318 0.970204 0.644091 8.89169e+07 0.00520814 1.88433e+07 1.51292e+07 1.89239e+07 173 1.9802e+07 1.03916e+07 0.00450927 1.97101e+07 49.8837 0.0084931 0.991937 0 50.1067 GTEX-X4EP-3226-SM-3P5YR 1 C1 1 piece, 9x7mm; focus of neurohypophysis noted, delineated 7.3 Pituitary Pituitary 0000007 1186 1404 BP-30679 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.950399 525093 0.961316 0.972324 0.734089 24720 1 76 0.00337807 141 0 8.17828e+07 0.0383838 295280 8.41107e+07 1.06368e+07 24761 3.98471e+07 0 0.227227 0.972324 0.713773 8.17828e+07 0.00492999 1.74718e+07 1.51762e+07 1.7527e+07 158 1.83177e+07 1.32948e+07 0.00413653 1.83206e+07 50.0039 0.00351061 0.994249 0 50.0788 GTEX-X4LF-0001-SM-3PYKO B1 Blood Whole Blood 0013756 -106 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R01C01 GTEX-X4LF-0001-SM-3PZ79 B1 Blood Whole Blood 0013756 -106 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340004_R01C01 GTEX-X4LF-0001-SM-3USSN B1 Blood Whole Blood 0013756 -106 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) WES GTEX-X4LF-0001-SM-7DRQ5 B1 Blood Whole Blood 0013756 -106 BP-29349 DNA Isolation of Compromised Blood with Autopure 08/14/2012 LCSET-6341 01/15/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X4LF-0002-SM-4QASG B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -106 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990507 878636 0.965329 0.992579 0.785044 20719 1 76 0.00198374 138 0 6.69362e+07 0.0341502 416255 6.74366e+07 3.53136e+06 20744 3.32702e+07 0 0.180286 0.992579 0.779218 6.69362e+07 0.00267711 1.4864e+07 1.02283e+07 1.48712e+07 136 1.49418e+07 1.47035e+07 0.0023297 1.49384e+07 49.9944 0.00617253 0.994651 0 50.0122 GTEX-X4LF-0006-SM-3NMCO B1 8.8 Blood Whole Blood 0013756 -106 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988781 1.14858e+06 0.936498 0.991367 0.751474 21196 1 76 0.00339876 193 0 9.95617e+07 0.0629424 184508 1.00429e+08 1.25588e+07 21225 4.95077e+07 0 0.185023 0.991367 0.744987 9.95617e+07 0.00506001 2.11583e+07 4.82609e+07 2.10547e+07 203 2.11563e+07 1.71231e+07 0.00422722 2.13249e+07 50.1985 0.0018372 0.993952 0 49.8773 GTEX-X4LF-0008-SM-4QAST B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 180 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990371 583029 0.973659 0.992408 0.82577 21116 1 76 0.00172268 174 0 7.84776e+07 0.025963 317850 7.9078e+07 3.98734e+06 21139 3.90411e+07 0 0.147889 0.992408 0.8195 7.84776e+07 0.00243204 1.73368e+07 8.73177e+06 1.74646e+07 176 1.75174e+07 1.72272e+07 0.00207663 1.74469e+07 49.8991 0.00401945 0.994444 0 50.1835 GTEX-X4LF-0126-SM-4QAS7 1 B1 2 pieces, 14x10 & 12x9mm; all cortex, less than 10% adherent fat, delineated 5.8 Adrenal Gland Adrenal Gland 0002369 83 557 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.991623 461806 0.977261 0.993613 0.852625 22466 1 76 0.00182087 160 0 7.11774e+07 0.0223999 890143 7.1635e+07 3.67356e+06 22484 3.54212e+07 0 0.124635 0.993613 0.847179 7.11774e+07 0.0025225 1.57089e+07 8.20343e+06 1.5902e+07 194 1.5875e+07 1.18545e+07 0.00217098 1.58715e+07 49.9946 0.0124261 0.995602 0 50.3055 GTEX-X4LF-0226-SM-4QAS8 1 B1 2 pieces, 13x10 & 12x10.5mm; mild congestion; well-preserved 6 Spleen Spleen 0002106 80 560 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98627 425888 0.961783 0.989554 0.777939 23682 1 76 0.00233021 144 0 6.66929e+07 0.0373914 316233 6.73969e+07 3.71926e+06 23705 3.30888e+07 0 0.183844 0.989554 0.769813 6.66929e+07 0.00320354 1.45345e+07 8.01112e+06 1.471e+07 163 1.47496e+07 9.67331e+06 0.00276543 1.47128e+07 49.9375 0.0046921 0.992839 0 50.3001 GTEX-X4LF-0326-SM-4QAS9 1 B1 2 pieces, 20x12 & 16x9.5mm; extremely well preserved parenchma with minimal interstitial fat; ~4mm adherent fatty nubbin on one, encircled. Islets well-seen, rep. ones delineated 6.4 Pancreas Pancreas 0001150 89 551 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98912 435743 0.974995 0.992199 0.844701 21685 1 76 0.00204026 123 0 7.76576e+07 0.0247151 144088 7.82682e+07 4.15484e+06 21697 3.8577e+07 0 0.130294 0.992199 0.838112 7.76576e+07 0.00288289 1.76729e+07 1.7484e+07 1.78917e+07 134 1.79316e+07 2.10101e+07 0.00246027 1.78831e+07 49.9322 0.00184095 0.995278 0 50.3077 GTEX-X4LF-0426-SM-3NMB5 1 B1 2 pieces, 16x10 & 12x11mm; 6.1 Thyroid Thyroid 0002046 95 545 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.98968 332591 0.962068 0.992069 0.747837 24384 1 76 0.00286894 162 0 8.24561e+07 0.0375886 482313 8.31153e+07 1.07492e+07 24427 4.10052e+07 0 0.214231 0.992069 0.741906 8.24561e+07 0.00422207 1.80209e+07 1.12931e+07 1.80378e+07 195 1.80572e+07 1.11728e+07 0.00354388 1.81861e+07 50.1779 0.00580294 0.994457 0 50.0234 GTEX-X4LF-0526-SM-3NMB6 1 B1 2 pieces, 12x8 & 13x13mm; well -preserved bronchioles present, rep. ones delineated. Emphysematous changes noted 8.2 Lung Lung 0008952 100 540 BP-30712 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.989449 482225 0.964666 0.991893 0.78668 25223 1 76 0.00307692 274 0 1.01054e+08 0.034411 448485 1.0188e+08 1.2197e+07 25272 5.02286e+07 0 0.177986 0.991893 0.780302 1.01054e+08 0.00448755 2.22566e+07 1.4609e+07 2.23048e+07 294 2.2353e+07 1.63742e+07 0.0037805 2.24491e+07 50.1072 0.00440208 0.994337 0 50.054 GTEX-X4LF-0626-SM-4QASB 0 B1 6 pieces, up to 8x4mm; ~10-15% thickness is wel preserved squamous mucosa; sub-mucosal mucus glands present, rep ones delineated 8.5 Esophagus Esophagus - Mucosa 0006920 119 521 BP-30683 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989308 620514 0.973195 0.991176 0.826714 22461 1 76 0.00198938 152 0 7.17145e+07 0.026406 361499 7.23529e+07 3.71942e+06 22478 3.56787e+07 0 0.146481 0.991176 0.819419 7.17145e+07 0.00271882 1.60194e+07 1.09927e+07 1.61252e+07 172 1.61059e+07 1.33433e+07 0.00235341 1.61776e+07 50.1111 0.00499633 0.993043 0 50.1646 GTEX-X4LF-0826-SM-4QASC 0 B1 6 pieces, up to 10x5mm; essentially all muscularis, good specimens 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 120 520 BP-30683 RNA isolation_PAXgene Tissue miRNA 09/05/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989694 613126 0.97188 0.991824 0.821541 21736 1 76 0.00180654 142 0 6.57877e+07 0.0278609 301672 6.633e+07 3.53028e+06 21752 3.2731e+07 0 0.150339 0.991824 0.814824 6.57877e+07 0.00249602 1.41517e+07 8.13472e+06 1.43391e+07 164 1.43138e+07 1.09666e+07 0.00215054 1.432e+07 50.0109 0.00454804 0.993954 0 50.3287 GTEX-X4LF-1726-SM-3NMBZ 0 B1 2 pieces, 15x10 & 16x11mm; 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 185 455 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990224 544960 0.968343 0.992665 0.793948 24149 1 76 0.00282225 279 0 1.0016e+08 0.0313213 376498 1.009e+08 1.25241e+07 24187 4.98263e+07 0 0.174394 0.992665 0.788124 1.0016e+08 0.00412868 2.18617e+07 1.64334e+07 2.19455e+07 288 2.19743e+07 1.70193e+07 0.00347386 2.20758e+07 50.1152 0.00373141 0.995106 0 50.0957 GTEX-X4XX-0004-SM-3PYL3 C1 Blood Whole Blood 0013756 219 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R02C02 GTEX-X4XX-0004-SM-3PZ7P C1 Blood Whole Blood 0013756 219 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340006_R04C01 GTEX-X4XX-0004-SM-3USR8 C1 Blood Whole Blood 0013756 219 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) WES GTEX-X4XX-0004-SM-5URCR C1 Blood Whole Blood 0013756 219 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X4XX-0005-SM-3NMCS C1 8.3 Blood Whole Blood 0013756 219 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.981298 1.19956e+06 0.938383 0.984062 0.751924 20060 1 76 0.00395182 122 0 8.99328e+07 0.0592413 187847 9.13894e+07 1.16273e+07 20075 4.46272e+07 0 0.186459 0.984062 0.73994 8.99328e+07 0.0058881 1.9646e+07 1.06471e+08 1.9924e+07 152 2.00125e+07 1.77094e+07 0.00491724 1.98266e+07 49.7667 0.00205546 0.986826 0 50.3513 GTEX-X4XX-0008-SM-46MVK C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 288 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992087 354420 0.975558 0.994154 0.8332 20677 1 76 0.00182862 157 0 6.75349e+07 0.0240566 193773 6.7932e+07 4.67775e+06 20695 3.36249e+07 0 0.142358 0.994154 0.82833 6.75349e+07 0.00243229 1.49961e+07 7.21948e+06 1.50507e+07 148 1.51216e+07 1.53595e+07 0.00212983 1.5062e+07 49.9014 0.00285245 0.996222 0 50.0908 GTEX-X4XX-0011-R10B-SM-46MWO C1, A1 7.9 Brain Brain - Frontal Cortex (BA9) 0009834 223 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990928 530724 0.959435 0.99336 0.83537 22795 1 76 0.00202556 145 0 6.20254e+07 0.0400673 1.47282e+06 6.244e+07 4.15829e+06 22812 3.08463e+07 0 0.124065 0.99336 0.829824 6.20254e+07 0.00294778 1.35875e+07 8.46626e+06 1.36035e+07 169 1.3648e+07 8.41776e+06 0.00248554 1.36852e+07 50.068 0.0235877 0.995793 0 50.0293 GTEX-X4XX-0011-R11A-SM-46MWQ C1, A1 8 Brain Brain - Cerebellar Hemisphere 0002037 223 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990185 524945 0.947854 0.992322 0.732275 22987 1 76 0.00232199 127 0 7.15127e+07 0.0516343 649085 7.2066e+07 4.69397e+06 23011 3.55566e+07 0 0.215579 0.992322 0.726653 7.15127e+07 0.00314621 1.55176e+07 8.49396e+06 1.55266e+07 162 1.56309e+07 9.40303e+06 0.00273321 1.5557e+07 49.8816 0.00900682 0.99446 0 50.0143 GTEX-X4XX-0011-R1B-SM-3P622 C1, A1 7.8 Brain Brain - Hippocampus 0001954 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.95159 545076 0.962078 0.973264 0.823485 24685 1 76 0.00329995 272 0 1.17006e+08 0.0375889 6.82496e+06 1.2022e+08 1.57934e+07 24714 5.70938e+07 0 0.138593 0.973264 0.801468 1.17006e+08 0.00465158 2.50922e+07 3.28429e+07 2.52401e+07 316 2.61517e+07 1.27596e+07 0.00396071 2.64288e+07 50.2635 0.0567704 0.994937 0 50.1469 GTEX-X4XX-0011-R2A-SM-3P623 C1, A1 7.6 Brain Brain - Substantia nigra 0002038 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2386 12/16/2012 TruSeq.v1 RNASEQ 0.952342 498329 0.958312 0.973847 0.791211 23926 1 76 0.00308699 284 0 1.0586e+08 0.0412948 2.38557e+06 1.08703e+08 1.43158e+07 23961 5.16413e+07 0 0.167101 0.973847 0.770518 1.0586e+08 0.0043932 2.28335e+07 1.40446e+07 2.30421e+07 304 2.39406e+07 1.5707e+07 0.00372567 2.40195e+07 50.0822 0.0219458 0.995352 0 50.2274 GTEX-X4XX-0011-R3B-SM-46MWK C1, A1 7.4 Brain Brain - Anterior cingulate cortex (BA24) 0009835 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991261 356984 0.960721 0.993613 0.839523 22545 1 76 0.00212857 126 0 5.80152e+07 0.0389227 2.37004e+06 5.83881e+07 4.08692e+06 22555 2.88647e+07 0 0.121198 0.993613 0.83416 5.80152e+07 0.00304221 1.27234e+07 8.93191e+06 1.27981e+07 164 1.27988e+07 6.67985e+06 0.00258431 1.28498e+07 50.0994 0.0405912 0.995965 0 50.1463 GTEX-X4XX-0011-R4B-SM-46MWL C1, A1 5.9 Brain Brain - Amygdala 0001876 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989952 279648 0.96509 0.992517 0.838512 22576 1 76 0.00230042 188 0 6.58542e+07 0.0346772 4.71203e+06 6.63507e+07 4.60880e+06 22590 3.27567e+07 0 0.126578 0.992517 0.832237 6.58542e+07 0.00326372 1.4539e+07 1.13897e+07 1.46825e+07 207 1.46184e+07 5.8919e+06 0.00278083 1.47573e+07 50.2364 0.071017 0.995082 0 50.2455 GTEX-X4XX-0011-R5A-SM-46MWN C1, A1 7.1 Brain Brain - Caudate (basal ganglia) 0001873 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990624 366401 0.96294 0.993073 0.820107 23077 1 76 0.00216052 150 0 6.40453e+07 0.0367196 2.44312e+06 6.4492e+07 4.34904e+06 23093 3.18573e+07 0 0.142833 0.993073 0.814426 6.40453e+07 0.00306663 1.4112e+07 9.05112e+06 1.42223e+07 173 1.4206e+07 8.18848e+06 0.00261246 1.42755e+07 50.1221 0.0378825 0.995522 0 50.1946 GTEX-X4XX-0011-R6B-SM-46MWP C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 223 BP-31773 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990918 392425 0.960112 0.993416 0.823646 22801 1 76 0.00219614 124 0 6.04013e+07 0.0395284 2.37566e+06 6.08016e+07 4.13171e+06 22814 3.00496e+07 0 0.136466 0.993416 0.818224 6.04013e+07 0.00307648 1.31801e+07 9.76464e+06 1.32923e+07 163 1.33396e+07 7.23444e+06 0.0026352 1.32745e+07 49.8777 0.0390724 0.995915 0 50.212 GTEX-X4XX-0011-R7A-SM-46MWR C1, A1 6.2 Brain Brain - Putamen (basal ganglia) 0001874 223 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-2933,LCSET-3246 05/10/2013 TruSeq.v1 EXCLUDE 0.98637 307400 0.966779 0.988766 0.844623 19742 1 76 0.00217025 138 0 5.99423e+07 0.0328907 3.2024e+06 6.06233e+07 3.72784e+06 19753 2.97628e+07 0 0.122156 0.988766 0.835134 5.99423e+07 0.00315483 1.33257e+07 6.90152e+06 1.34406e+07 183 1.34406e+07 6.05234e+06 0.00266135 1.34637e+07 50.0431 0.0528246 0.991161 0 50.2147 GTEX-X4XX-0011-R8B-SM-46MWM C1, A1 6.9 Brain Brain - Hypothalamus 0001898 223 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988893 404741 0.96301 0.991977 0.833662 23862 1 76 0.00221239 156 0 6.96113e+07 0.0366236 3.26775e+06 7.01743e+07 4.84199e+06 23880 3.45996e+07 0 0.129348 0.991977 0.826974 6.96113e+07 0.00314545 1.5361e+07 9.60558e+06 1.54943e+07 200 1.55157e+07 8.63583e+06 0.00267747 1.55446e+07 50.0466 0.0465662 0.99506 0 50.216 GTEX-X4XX-0126-SM-3NMC2 0 C1 6 pieces, up to 7x3mm; Well trimmed, no subcutaneous adipose, but internal adipose is up to 30%. 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 287 1437 BP-30738 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.988793 599260 0.963433 0.991251 0.804522 24732 1 76 0.00304941 290 0 1.06141e+08 0.0363179 748402 1.07078e+08 1.32527e+07 24761 5.28081e+07 0 0.158911 0.991251 0.797484 1.06141e+08 0.00448819 2.31086e+07 2.26253e+07 2.32193e+07 327 2.3223e+07 1.69536e+07 0.00376702 2.33622e+07 50.1494 0.00698931 0.993709 0 50.1195 GTEX-X4XX-0626-SM-3NMC1 1 C1 2 pieces, 7x5 & 8x6mm; Well trimmed; <10% internal adipose 8.3 Muscle Muscle - Skeletal 0011907 302 1425 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990864 403990 0.973269 0.993188 0.838504 22188 1 76 0.002696 275 0 1.02897e+08 0.0264291 1.05643e+06 1.03602e+08 1.29372e+07 22210 5.12024e+07 0 0.134765 0.993188 0.832792 1.02897e+08 0.00402897 2.22547e+07 1.35793e+07 2.22345e+07 285 2.22827e+07 2.07947e+07 0.00336093 2.24309e+07 50.1657 0.010197 0.995513 0 49.9774 GTEX-X4XX-0726-SM-4QARS 1 C1 2 pieces, 7x6 & 8x7mm; Atrophy, fibrosis, arrested spermatogenesis 5.7 Testis Testis 0000473 304 1424 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-3737 08/30/2013 TruSeq.v1 EXCLUDE 0.987124 481952 0.94915 0.990086 0.729284 28157 1 76 0.00222467 139 0 6.92549e+07 0.0506581 1.1705e+06 6.99484e+07 3.84889e+06 28199 3.4401e+07 0 0.219866 0.990086 0.722054 6.92549e+07 0.00306566 1.50026e+07 8.90092e+06 1.50691e+07 162 1.51072e+07 8.50151e+06 0.0026439 1.51623e+07 50.0909 0.0167338 0.993049 0 50.1105 GTEX-X4XX-0926-SM-46MV7 1 C1 2 pieces, 8x8 & 9x9mm; 6.4 Thyroid Thyroid 0002046 317 1413 BP-30751 RNA isolation_PAXgene Tissue miRNA 09/07/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.986815 253422 0.960916 0.989773 0.728146 23420 1 76 0.00222882 117 0 6.20095e+07 0.0388188 235748 6.26503e+07 4.41008e+06 23454 3.08205e+07 0 0.23277 0.989773 0.720699 6.20095e+07 0.00316755 1.34788e+07 6.89583e+06 1.35082e+07 136 1.35766e+07 8.70823e+06 0.00269679 1.35865e+07 50.0183 0.00376292 0.99273 0 50.0544 GTEX-X4XX-1026-SM-4QARO 1 C1 2 pieces, 9x7 & 8x6mm; 5.8 Lung Lung 0008952 321 1409 BP-30732 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988167 564328 0.968654 0.990891 0.783413 23924 1 76 0.00224957 142 0 6.96629e+07 0.0308406 88916 7.03033e+07 3.51404e+06 23948 3.46004e+07 0 0.185242 0.990891 0.776277 6.96629e+07 0.00302042 1.52803e+07 8.33314e+06 1.53297e+07 160 1.53725e+07 1.16131e+07 0.00263394 1.54321e+07 50.0968 0.00126475 0.993614 0 50.0808 GTEX-X4XX-1126-SM-3NMBY 1 C1 2 pieces, 8x8 & 8x6mm; Moderate interstitial fibrosis. 40 and 1, 0% internal adipose 6.8 Heart Heart - Atrial Appendage 0006631 323 1408 BP-30732 RNA isolation_PAXgene Tissue miRNA 09/06/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.99085 354103 0.975527 0.993099 0.79434 23862 1 76 0.00301442 270 0 1.02662e+08 0.0242064 2.34783e+06 1.03375e+08 1.21526e+07 23896 5.10864e+07 0 0.181186 0.993099 0.788858 1.02662e+08 0.00433978 2.26364e+07 1.57261e+07 2.26318e+07 320 2.2695e+07 1.51652e+07 0.0036756 2.27941e+07 50.1089 0.0227118 0.995347 0 49.9949 GTEX-X4XX-2926-SM-3NMB1 2 C1 4 pieces, up to 6x4mm; 7.2 Brain Brain - Cerebellum 0002037 380 1365 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.9901 569082 0.944628 0.991952 0.704792 25374 1 76 0.00313279 270 0 1.21826e+08 0.0549693 1.30252e+06 1.22814e+08 1.37188e+07 25425 6.05992e+07 0 0.239836 0.991952 0.699119 1.21826e+08 0.0043029 2.6358e+07 1.89855e+07 2.64137e+07 308 2.65047e+07 1.45636e+07 0.00371676 2.64739e+07 49.9709 0.0106056 0.993804 0 50.0528 GTEX-X4XX-3026-SM-3NMB2 1 C1 4 pieces, up to 5.5x5mm; 7 Brain Brain - Cortex 0001870 383 1364 BP-31129 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2385 12/16/2012 TruSeq.v1 RNASEQ 0.990238 905563 0.949773 0.992401 0.802931 25455 1 76 0.00297509 270 0 1.11449e+08 0.0498621 3.29722e+06 1.12303e+08 1.36563e+07 25491 5.54563e+07 0 0.146842 0.992401 0.796829 1.11449e+08 0.00433108 2.4175e+07 2.81558e+07 2.43264e+07 329 2.43291e+07 1.32442e+07 0.00365161 2.44015e+07 50.0743 0.0293601 0.994564 0 50.1561 GTEX-X4XY-0002-SM-3PYKN C1 Blood Whole Blood 0013756 420 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R05C01 GTEX-X4XY-0002-SM-3PZ7Q C1 Blood Whole Blood 0013756 420 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660006_R01C01 GTEX-X4XY-0002-SM-3UZEV C1 Blood Whole Blood 0013756 420 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 LCSET-2665,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-X4XY-0002-SM-58Q91 C1 Blood Whole Blood 0013756 420 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X4XY-0002-SM-5URBG C1 Blood Whole Blood 0013756 420 BP-29463 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/15/2012 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X4XY-0006-SM-46MV2 C1 9 Blood Whole Blood 0013756 420 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.983854 372237 0.976634 0.986355 0.775435 19306 1 76 0.00229241 95 0 6.89333e+07 0.0219641 129071 6.98869e+07 5.20205e+06 19319 3.42178e+07 0 0.201199 0.986355 0.764854 6.89333e+07 0.00334438 1.58884e+07 7.59341e+07 1.59804e+07 116 1.60444e+07 1.63101e+07 0.00281706 1.59992e+07 49.9296 0.00184685 0.988855 0 50.1443 GTEX-X4XY-0008-SM-46MVL C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 610 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992632 343312 0.978121 0.994535 0.852815 19891 1 76 0.00173822 144 0 6.58779e+07 0.021528 240137 6.62399e+07 4.36725e+06 19905 3.28121e+07 0 0.125307 0.994535 0.848154 6.58779e+07 0.00250071 1.47342e+07 7.72408e+06 1.47884e+07 143 1.485e+07 1.62187e+07 0.00211874 1.47942e+07 49.9058 0.00362526 0.996439 0 50.0917 GTEX-X4XY-0011-R10B-SM-46MWS C1, A1 6.5 Brain Brain - Frontal Cortex (BA9) 0009834 424 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988723 274091 0.965324 0.990669 0.862392 20125 1 76 0.0018411 384 0 8.11835e+07 0.0344858 9.71407e+06 8.19481e+07 5.33791e+06 20138 4.04187e+07 0 0.102932 0.990669 0.854345 8.11835e+07 0.00265333 1.79595e+07 1.48633e+07 1.83726e+07 338 1.80651e+07 6.63845e+06 0.00224642 1.83951e+07 50.4525 0.118539 0.992614 0 50.5686 GTEX-X4XY-0011-R3B-SM-EXOHI C1, A1 5.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 424 BP-32212 RNA isolation_PAXgene Tissue miRNA 10/16/2012 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.98227 731233 0.957248 0.984572 0.85487 22529 1 76 0.00170206 373 0 9.84599e+07 0.0425778 1.22372e+07 1.00003e+08 5.22104e+06 22545 4.89986e+07 0 0.102378 0.984572 0.841682 9.84599e+07 0.00320022 2.14424e+07 2.92921e+07 2.19698e+07 354 2.1667e+07 6.58713e+06 0.00244939 2.19357e+07 50.3081 0.122369 0.986875 0 50.6074 GTEX-X4XY-0011-R6B-SM-46MVB C1, A1 6.2 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 424 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.980687 376994 0.97003 0.983336 0.865942 19609 1 76 0.00187061 260 0 6.98356e+07 0.0298875 1.13571e+07 7.1019e+07 5.00378e+06 19617 3.47582e+07 0 0.104089 0.983336 0.851512 6.98356e+07 0.00284437 1.52554e+07 2.57722e+07 1.56854e+07 324 1.54509e+07 2.36557e+06 0.00235618 1.56512e+07 50.322 0.159916 0.985986 0 50.6948 GTEX-X4XY-0011-R8A-SM-46MVC C1, A1 6.1 Brain Brain - Hypothalamus 0001898 424 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988186 208409 0.971142 0.990758 0.872244 20036 1 76 0.00186465 201 0 5.90584e+07 0.0287299 7.79553e+06 5.96092e+07 4.02635e+06 20043 2.93932e+07 0 0.0988985 0.990758 0.864183 5.90584e+07 0.00289921 1.31256e+07 1.32013e+07 1.33e+07 223 1.31648e+07 3.76818e+06 0.00238059 1.33942e+07 50.4319 0.130777 0.993331 0 50.33 GTEX-X4XY-0226-SM-4E3IZ 1 C1 6 pieces, up to 7x3mm; well dissected without subcutaneous adipose 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 609 1122 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987452 575174 0.973139 0.990463 0.796165 23544 1 76 0.0024996 204 0 8.69972e+07 0.0266769 868868 8.78349e+07 1.00465e+07 23572 4.32559e+07 0 0.176973 0.990463 0.788572 8.69972e+07 0.00367223 1.93681e+07 1.43496e+07 1.941e+07 212 1.94571e+07 1.4645e+07 0.00308413 1.95856e+07 50.1645 0.00989206 0.993474 0 50.0541 GTEX-X4XY-0326-SM-46MVZ 1 C1 2 pieces, 10x8 & 10x7mm; 1 is all adipose, other contains 40% fibrovascular tissue 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 611 1121 BP-31059 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.985828 286083 0.974481 0.988637 0.828804 21209 1 76 0.00193644 128 0 5.74117e+07 0.0252479 195836 5.80715e+07 3.86385e+06 21231 2.85531e+07 0 0.145678 0.988637 0.819386 5.74117e+07 0.00292335 1.26375e+07 6.29286e+06 1.26845e+07 141 1.27339e+07 1.0394e+07 0.00242849 1.27443e+07 50.0205 0.00337232 0.991446 0 50.0928 GTEX-X4XY-0526-SM-46MW1 1 C1 2 pieces, 4x2 & 4x1mm; well trimmed 6.1 Blood Vessel Artery - Tibial 0007610 615 1118 BP-31059 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.98865 350083 0.968844 0.991217 0.820798 20724 1 76 0.0019729 153 0 6.84741e+07 0.0309217 264707 6.90808e+07 4.76642e+06 20735 3.40524e+07 0 0.148046 0.991217 0.813589 6.84741e+07 0.00288169 1.47676e+07 8.21509e+06 1.47913e+07 170 1.4815e+07 1.1649e+07 0.00242612 1.49181e+07 50.1735 0.00383184 0.993785 0 50.0401 GTEX-X4XY-0626-SM-4E3IN 1 C1 2 pieces, 10x7 & 10x6mm; well trimmed, <10% internal adipose 8.6 Muscle Muscle - Skeletal 0011907 618 1115 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989088 617925 0.97528 0.991779 0.876425 20147 1 76 0.00228698 278 0 9.48274e+07 0.0244953 1.10526e+06 9.56134e+07 1.06723e+07 20156 4.71922e+07 0 0.0988549 0.991779 0.86922 9.48274e+07 0.00350903 2.06043e+07 1.67897e+07 2.07041e+07 283 2.07568e+07 1.89127e+07 0.00289635 2.07975e+07 50.0489 0.0115597 0.994471 0 50.1207 GTEX-X4XY-0826-SM-4E3JM 1 C1 2 pieces, 9x7 & 8x7mm; 10% stroma at edge of smaller piece 6.6 Thyroid Thyroid 0002046 634 1100 BP-36096 RNA isolation_PAXgene Tissue miRNA 02/13/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.983823 1.30106e+06 0.944304 0.987801 0.72319 25608 1 76 0.00265411 167 0 9.5478e+07 0.0554306 422989 9.66571e+07 1.06721e+07 25660 4.73791e+07 0 0.221114 0.987801 0.714368 9.5478e+07 0.00414028 2.03547e+07 2.82998e+07 2.04754e+07 200 2.06175e+07 1.46666e+07 0.0033942 2.06053e+07 49.9852 0.00437618 0.991779 0 50.1477 GTEX-X4XY-0926-SM-4E3JD 1 C1 2 pieces, 10x7 & 10x6mm; ducts present 7.4 Breast Breast - Mammary Tissue 0008367 637 1098 BP-36096 RNA isolation_PAXgene Tissue miRNA 02/13/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988558 482364 0.976023 0.991318 0.800615 23307 1 76 0.0025402 207 0 8.75246e+07 0.0236842 323179 8.82912e+07 9.63374e+06 23332 4.35356e+07 0 0.175407 0.991318 0.793664 8.75246e+07 0.00373915 1.93745e+07 1.17083e+07 1.94766e+07 221 1.95458e+07 1.52771e+07 0.00313801 1.95416e+07 49.9947 0.00366038 0.994078 0 50.1315 GTEX-X4XY-1026-SM-46MVX 2 C1 2 pieces, 8x7 & 8x7.5mm; emphysema 6.1 Lung Lung 0008952 639 1096 BP-31052 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.98659 298832 0.964534 0.989589 0.732661 24184 1 76 0.00229738 115 0 5.92385e+07 0.0351875 173076 5.98617e+07 4.18414e+06 24209 2.94346e+07 0 0.231873 0.989589 0.725033 5.92385e+07 0.00328737 1.2963e+07 6.82414e+06 1.30045e+07 129 1.30621e+07 8.90799e+06 0.00279087 1.3078e+07 50.0305 0.00289127 0.992589 0 50.0799 GTEX-X4XY-1526-SM-4QASE 1 C1 6 pieces, up to 7x2.5mm; uniform fibrous intimal plaques; fibrous adventitia up to 0.5 mm 5.9 Blood Vessel Artery - Aorta 0001496 652 1089 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.985406 425897 0.960875 0.987907 0.695781 23157 1 76 0.00234827 115 0 5.45882e+07 0.038843 125384 5.52564e+07 3.00353e+06 23185 2.70913e+07 0 0.265094 0.987907 0.687367 5.45882e+07 0.00324189 1.17547e+07 6.94985e+06 1.18251e+07 123 1.18419e+07 7.50948e+06 0.00279395 1.18776e+07 50.0752 0.00226913 0.990408 0 50.1492 GTEX-X4XY-1626-SM-46MVN 1 C1 2 pieces, 8x7 & 8x8mm; 20% macrovesicular steatosis 6.7 Liver Liver 0001114 653 1088 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.986183 262225 0.975259 0.988694 0.806482 20900 1 76 0.00203602 153 0 7.05353e+07 0.0241651 1.2162e+06 7.13418e+07 5.03289e+06 20914 3.50745e+07 0 0.168778 0.988694 0.797364 7.05353e+07 0.00287662 1.56804e+07 8.18715e+06 1.57611e+07 193 1.57838e+07 9.36302e+06 0.00245525 1.58229e+07 50.0619 0.0170474 0.991205 0 50.1284 GTEX-X4XY-1726-SM-46MVO 1 C1 6 pieces, up to 7x2mm; partly detached mucosa 6.9 Esophagus Esophagus - Mucosa 0006920 655 1087 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987452 279751 0.971915 0.989568 0.828059 20757 1 76 0.0020005 149 0 6.67856e+07 0.0279011 1.00931e+06 6.74897e+07 4.77797e+06 20768 3.32385e+07 0 0.143856 0.989568 0.81942 6.67856e+07 0.00297375 1.49408e+07 9.27389e+06 1.50205e+07 179 1.50439e+07 9.6326e+06 0.00248609 1.50575e+07 50.0225 0.014955 0.991683 0 50.133 GTEX-X4XY-3026-SM-EWRM9 1 C1 4 pieces, up to 8x5.5mm; 5.5 Brain Brain - Cortex 0001870 691 1059 BP-31273 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.979559 549788 0.960176 0.983127 0.849754 23505 1 76 0.0022349 370 0 9.43138e+07 0.0396022 7.59715e+06 9.59324e+07 6.56043e+06 23525 4.68778e+07 0 0.110422 0.983127 0.835416 9.43138e+07 0.00325742 2.05719e+07 2.04461e+07 2.08923e+07 375 2.07649e+07 7.55895e+06 0.00273236 2.09901e+07 50.2696 0.0791927 0.986696 0 50.3864 GTEX-X585-0002-SM-46MVA C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 713 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987325 623590 0.966998 0.989478 0.826412 20021 1 76 0.00261075 149 0 7.29504e+07 0.0313139 375655 7.37262e+07 5.25339e+06 20039 3.62374e+07 0 0.140586 0.989478 0.817716 7.29504e+07 0.00332032 1.62764e+07 1.2413e+07 1.63112e+07 152 1.64274e+07 1.69124e+07 0.00296476 1.63127e+07 49.8249 0.00509527 0.99163 0 50.0533 GTEX-X585-0003-SM-3PYKR C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R06C01 GTEX-X585-0003-SM-3PZ7U C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8739660006_R02C01 GTEX-X585-0003-SM-3USRA C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-X585-0003-SM-58Q8W C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X585-0003-SM-5URCW C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-5270,LCSET-5435 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-X585-0003-SM-7FG6K C1 Blood Whole Blood 0013756 713 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-6831 02/17/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-X585-0005-SM-46MV3 C1 8.5 Blood Whole Blood 0013756 713 BP-29481 RNA isolation_PAXgene Blood RNA (Manual) 08/15/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987775 432334 0.965341 0.990277 0.728969 20367 1 76 0.00285134 119 0 6.97313e+07 0.0339911 139612 7.04159e+07 4.97678e+06 20394 3.46445e+07 0 0.236371 0.990277 0.721881 6.97313e+07 0.00384782 1.53068e+07 1.67645e+07 1.53755e+07 135 1.54547e+07 1.17809e+07 0.00334832 1.5401e+07 49.9129 0.00198268 0.992779 0 50.1119 GTEX-X585-0008-SM-46MU4 C1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 780 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991634 357764 0.976948 0.993851 0.852108 19929 1 76 0.00184711 140 0 6.14047e+07 0.0226685 203753 6.17846e+07 4.30132e+06 19938 3.05699e+07 0 0.12484 0.993851 0.846869 6.14047e+07 0.0026925 1.36233e+07 6.96682e+06 1.36979e+07 136 1.37583e+07 1.4426e+07 0.00226886 1.36949e+07 49.8846 0.0032978 0.996069 0 50.1366 GTEX-X585-0011-R10A-SM-46MUY C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 720 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989378 415089 0.964278 0.992252 0.841918 23294 1 76 0.00206562 134 0 6.46376e+07 0.0349993 568216 6.51423e+07 4.43445e+06 23311 3.21237e+07 0 0.12236 0.992252 0.835395 6.46376e+07 0.00306992 1.4214e+07 6.82391e+06 1.42432e+07 162 1.43228e+07 1.09869e+07 0.00256632 1.4309e+07 49.976 0.00872268 0.995126 0 50.0514 GTEX-X585-0011-R10A-SM-CYKUN C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 720 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 RIP-Seq GTEX-X585-0011-R11B-SM-46MUZ C1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 720 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988974 437475 0.944122 0.991042 0.699758 23690 1 76 0.00260375 129 0 7.06388e+07 0.0554148 515172 7.12774e+07 4.78947e+06 23718 3.5105e+07 0 0.244364 0.991042 0.69349 7.06388e+07 0.00344808 1.52589e+07 1.13056e+07 1.52758e+07 146 1.53595e+07 9.63637e+06 0.00302503 1.53124e+07 49.9233 0.00722771 0.993109 0 50.0277 GTEX-X585-0011-R1B-SM-46MVE C1, A1 8 Brain Brain - Hippocampus 0001954 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99096 445863 0.958087 0.993133 0.840326 23132 1 76 0.00205991 150 0 6.09188e+07 0.0415597 2.98435e+06 6.134e+07 4.0871e+06 23147 3.03074e+07 0 0.117761 0.993133 0.834556 6.09188e+07 0.00292635 1.33341e+07 1.05037e+07 1.33995e+07 174 1.33985e+07 7.61455e+06 0.00249219 1.34659e+07 50.1254 0.0486526 0.995307 0 50.1222 GTEX-X585-0011-R2B-SM-46MVF C1, A1 7.6 Brain Brain - Substantia nigra 0002038 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990577 401519 0.963928 0.992596 0.844433 23645 1 76 0.00208315 200 0 7.2597e+07 0.0357394 3.23357e+06 7.31385e+07 4.73887e+06 23666 3.61245e+07 0 0.119494 0.992596 0.838182 7.2597e+07 0.00300864 1.61007e+07 1.00427e+07 1.61587e+07 210 1.61478e+07 1.05279e+07 0.00254496 1.62571e+07 50.1687 0.0442116 0.994616 0 50.09 GTEX-X585-0011-R3B-SM-46MVG C1, A1 8.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991761 349628 0.958932 0.99385 0.834962 22799 1 76 0.00207337 128 0 5.6058e+07 0.0406334 2.31361e+06 5.64049e+07 3.7377e+06 22815 2.78919e+07 0 0.12397 0.99385 0.829827 5.6058e+07 0.00287973 1.22795e+07 8.10683e+06 1.23121e+07 151 1.23382e+07 7.5938e+06 0.0024757 1.23647e+07 50.0538 0.041018 0.995938 0 50.0662 GTEX-X585-0011-R4B-SM-46MVH C1, A1 7.7 Brain Brain - Amygdala 0001876 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991248 331392 0.962867 0.993297 0.834187 23451 1 76 0.00210174 162 0 6.64754e+07 0.0367973 3.34024e+06 6.6924e+07 4.6684e+06 23472 3.30835e+07 0 0.12868 0.993297 0.828596 6.64754e+07 0.00290238 1.46857e+07 9.22238e+06 1.47703e+07 184 1.47532e+07 9.36617e+06 0.00250123 1.48338e+07 50.1362 0.0499109 0.995347 0 50.1435 GTEX-X585-0011-R5A-SM-46MVI C1, A1 7.7 Brain Brain - Caudate (basal ganglia) 0001873 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990928 419094 0.954752 0.993066 0.81892 23245 1 76 0.00213859 131 0 5.95595e+07 0.0449554 2.49599e+06 5.99754e+07 3.84084e+06 23256 2.96359e+07 0 0.135832 0.993066 0.813242 5.95595e+07 0.0030224 1.29864e+07 1.12276e+07 1.30517e+07 158 1.30522e+07 7.73515e+06 0.00257954 1.31112e+07 50.1127 0.0416169 0.995204 0 50.1254 GTEX-X585-0011-R6A-SM-46MVJ C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 720 BP-32313 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.9904 410010 0.955345 0.992687 0.83389 22785 1 76 0.00213989 131 0 5.69973e+07 0.0443459 3.04506e+06 5.74172e+07 3.75998e+06 22799 2.83561e+07 0 0.121455 0.992687 0.827792 5.69973e+07 0.00303171 1.24263e+07 1.11689e+07 1.24964e+07 155 1.24981e+07 7.52358e+06 0.00258477 1.2552e+07 50.1076 0.0530339 0.994974 0 50.1407 GTEX-X585-0011-R8A-SM-46MUX C1, A1 6.9 Brain Brain - Hypothalamus 0001898 720 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991182 443131 0.958112 0.993536 0.840733 23890 1 76 0.00207276 156 0 6.57423e+07 0.0413465 1.60099e+06 6.61701e+07 4.48237e+06 23907 3.27005e+07 0 0.117379 0.993536 0.835299 6.57423e+07 0.00290775 1.44282e+07 9.42728e+06 1.44629e+07 173 1.45176e+07 1.04484e+07 0.00248927 1.45247e+07 50.0122 0.0241951 0.99589 0 50.0602 GTEX-X585-0226-SM-4QAS2 1 C1 6 pieces, up to 8x3mm; Well trimmed, free of subcutaneous adipose. 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 780 1127 BP-31273 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989806 360823 0.970308 0.9917 0.814747 22651 1 76 0.00207154 152 0 6.5331e+07 0.0294719 277945 6.58778e+07 3.40568e+06 22673 3.24957e+07 0 0.155561 0.9917 0.807985 6.5331e+07 0.0028736 1.4337e+07 7.98132e+06 1.44106e+07 163 1.43724e+07 1.1067e+07 0.0024718 1.45076e+07 50.234 0.0042191 0.993595 0 50.128 GTEX-X585-0426-SM-4E3JZ 1 C1 2 pieces, 5x2 & 7x2.5mm; Well trimmed nerve: <5% adipose. 7.5 Nerve Nerve - Tibial 0001323 787 1121 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988201 515885 0.961477 0.990981 0.760794 23713 1 76 0.00268727 161 0 7.30866e+07 0.0382316 163167 7.37518e+07 7.6543e+06 23744 3.63146e+07 0 0.200684 0.990981 0.753932 7.30866e+07 0.00389467 1.59389e+07 1.15618e+07 1.60133e+07 163 1.60548e+07 1.1528e+07 0.00328928 1.61058e+07 50.0794 0.00221238 0.993761 0 50.1164 GTEX-X585-1026-SM-46MW6 2 C1 2 pieces, 9x7 & 8x7mm; Mucopurulent exudates in bronchi, but no pneumonia. 7.1 Lung Lung 0008952 818 1093 BP-31241 RNA isolation_PAXgene Tissue miRNA 09/18/2012 LCSET-2933,LCSET-3246 05/10/2013 TruSeq.v1 RNASEQ 0.987969 296002 0.970638 0.990075 0.777933 23993 1 76 0.0023745 138 0 7.22614e+07 0.0288909 154057 7.29858e+07 3.99700e+06 24025 3.59232e+07 0 0.192704 0.990075 0.770212 7.22614e+07 0.00322969 1.59721e+07 9.015e+06 1.60056e+07 163 1.60672e+07 1.19997e+07 0.00280119 1.60624e+07 49.9926 0.00211078 0.99218 0 50.0523 GTEX-X585-1226-SM-46MW7 1 C1 6 pieces, up to 7x2mm; Well dissected mucosa with some epithelial detachment. 7.3 Esophagus Esophagus - Mucosa 0006920 821 1091 BP-31241 RNA isolation_PAXgene Tissue miRNA 09/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.986692 259879 0.967126 0.989388 0.75631 23857 1 76 0.00234055 132 0 6.69247e+07 0.0324857 506495 6.76425e+07 4.86068e+06 23882 3.32665e+07 0 0.210815 0.989388 0.748285 6.69247e+07 0.00327566 1.47768e+07 9.40431e+06 1.48503e+07 146 1.49006e+07 1.09252e+07 0.00280683 1.49056e+07 50.0085 0.00748782 0.992085 0 50.1239 GTEX-X585-1426-SM-4E3JO 2 C1 6 pieces, up to 9x4mm; Muscle with outer bands of adipose tissue up to 1.5 mm thick (should be trimmed of adipose).. 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 825 1088 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.983489 414911 0.966551 0.986682 0.776996 23872 1 76 0.00275124 156 0 7.71197e+07 0.0331624 453697 7.81606e+07 8.40395e+06 23901 3.83081e+07 0 0.189555 0.986682 0.766648 7.71197e+07 0.00415837 1.67616e+07 1.20061e+07 1.68573e+07 167 1.69016e+07 1.35064e+07 0.00345253 1.69673e+07 50.097 0.00580467 0.989875 0 50.1423 GTEX-X585-1826-SM-4QAS3 2 C1 2 pieces, 7x6 & 7x6mm; 5.7 Spleen Spleen 0002106 834 1081 BP-31298 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.986306 416463 0.95508 0.989032 0.745605 24209 1 76 0.00290176 139 0 7.25735e+07 0.0431317 573050 7.33783e+07 3.84325e+06 24247 3.59828e+07 0 0.209475 0.989032 0.737427 7.25735e+07 0.00369554 1.58104e+07 1.40766e+07 1.58709e+07 163 1.59476e+07 9.67356e+06 0.00329755 1.59341e+07 49.9789 0.00780953 0.991759 0 50.0956 GTEX-X585-2426-SM-46MW2 2 C1 6 pieces, up to 7x3mm; Up to 1 mm subcutaneous adipose 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 847 1077 BP-31409 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.986279 272407 0.976336 0.988637 0.846469 22130 1 76 0.00219077 166 0 7.32409e+07 0.0234064 432760 7.40827e+07 5.06511e+06 22146 3.64336e+07 0 0.129867 0.988637 0.83685 7.32409e+07 0.0032208 1.62191e+07 1.03058e+07 1.6248e+07 174 1.63006e+07 1.46014e+07 0.00270456 1.63366e+07 50.0552 0.00584158 0.990995 0 50.0446 GTEX-X585-2526-SM-4QAS1 0 C1 2 pieces, 8x7 & 9x6mm; No artifacts. 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 849 1075 BP-31409 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98822 283115 0.974346 0.991107 0.830255 21798 1 76 0.00205901 139 0 6.24273e+07 0.0253169 223035 6.29875e+07 3.43626e+06 21814 3.10035e+07 0 0.144091 0.991107 0.822872 6.24273e+07 0.0029507 1.35631e+07 6.99767e+06 1.36649e+07 151 1.36885e+07 1.22844e+07 0.00250355 1.37265e+07 50.0694 0.00354094 0.993994 0 50.1868 GTEX-X585-3026-SM-46MWF 2 C1 4 pieces, up to 5x5mm; 6.5 Brain Brain - Cortex 0001870 864 1065 BP-31492 RNA isolation_PAXgene Tissue miRNA 09/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989671 306620 0.966009 0.99164 0.818578 23766 1 76 0.00215579 154 0 6.87522e+07 0.0335366 716379 6.93318e+07 4.81874e+06 23779 3.41964e+07 0 0.147431 0.99164 0.811735 6.87522e+07 0.00301954 1.5198e+07 8.31914e+06 1.52586e+07 172 1.52907e+07 1.09771e+07 0.00258681 1.52948e+07 50.0066 0.0103326 0.993609 0 50.0994 GTEX-X585-3126-SM-4QASH 2 C1 1 piece, 8x8mm; Mostly anterior pit.; 2x2 mm posterior pituitary. 5.8 Pituitary Pituitary 0000007 865 1064 BP-31492 RNA isolation_PAXgene Tissue miRNA 09/26/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989673 535926 0.956414 0.991625 0.76146 25661 1 76 0.00217213 144 0 7.2345e+07 0.0433167 408249 7.29561e+07 3.74125e+06 25699 3.59607e+07 0 0.194954 0.991625 0.755082 7.2345e+07 0.00300941 1.53741e+07 9.84066e+06 1.54266e+07 165 1.54429e+07 1.16224e+07 0.00258995 1.55035e+07 50.0978 0.00559582 0.993576 0 50.0853 GTEX-X5EB-0001-SM-3PYKT B1 Blood Whole Blood 0013756 -102 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R04C02 GTEX-X5EB-0001-SM-3PZ7V B1 Blood Whole Blood 0013756 -102 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8514840038_R02C01 GTEX-X5EB-0001-SM-3USRB B1 Blood Whole Blood 0013756 -102 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-2654,LCSET-2777 02/01/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-X5EB-0001-SM-58Q75 B1 Blood Whole Blood 0013756 -102 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-4574 01/15/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X5EB-0001-SM-5URCX B1 Blood Whole Blood 0013756 -102 BP-29525 DNA Isolation of Compromised Blood with Autopure 08/16/2012 LCSET-5270,LCSET-5380 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X5EB-0004-SM-46MWA B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -101 BP-31744 RNA isolation_Trizol Manual (Cell Pellet) 10/03/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99081 514452 0.967081 0.993075 0.792546 20782 1 76 0.00218379 129 0 6.07341e+07 0.0323365 520855 6.11577e+07 4.10998e+06 20804 3.02138e+07 0 0.174535 0.993075 0.787058 6.07341e+07 0.00286967 1.34982e+07 7.89726e+06 1.35685e+07 126 1.3648e+07 1.32803e+07 0.00252595 1.35477e+07 49.8156 0.00851659 0.99534 0 50.13 GTEX-X5EB-0006-SM-46MV5 B1 8.1 Blood Whole Blood 0013756 -102 BP-29580 RNA isolation_PAXgene Blood RNA (Manual) 08/17/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.979561 538945 0.971758 0.98162 0.805929 16756 1 76 0.00201767 99 0 7.5308e+07 0.0276453 167087 7.67181e+07 5.67949e+06 16762 3.74703e+07 0 0.165829 0.98162 0.791116 7.5308e+07 0.00321129 1.73887e+07 1.08385e+08 1.76091e+07 129 1.76819e+07 1.92487e+07 0.00261323 1.74849e+07 49.72 0.00217794 0.983679 0 50.3148 GTEX-X5EB-0008-SM-46MU3 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 276 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.992292 316781 0.976113 0.994414 0.850696 19529 1 76 0.00167881 127 0 5.50201e+07 0.0235332 169938 5.53292e+07 3.48741e+06 19540 2.73942e+07 0 0.125417 0.994414 0.845944 5.50201e+07 0.00233903 1.2245e+07 7.03361e+06 1.2325e+07 122 1.23722e+07 1.30901e+07 0.00200822 1.23107e+07 49.8752 0.0030714 0.996535 0 50.1629 GTEX-X5EB-0326-SM-4QASF 1 B1 2 pieces, 4x2 & 5x4mm; one with nearly total atherosclerotic occlusion, delineated, the other with ~30% occlusion 6.4 Blood Vessel Artery - Coronary 0001621 193 1018 BP-31052 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.991046 586690 0.969438 0.993072 0.813833 22591 1 76 0.0018685 130 0 6.03666e+07 0.0302246 218641 6.07878e+07 3.13053e+06 22610 3.00234e+07 0 0.155605 0.993072 0.808195 6.03666e+07 0.00264466 1.32013e+07 7.58013e+06 1.32836e+07 148 1.32656e+07 1.06186e+07 0.00225579 1.33494e+07 50.1575 0.00359679 0.995097 0 50.1553 GTEX-X5EB-0426-SM-46MVY 1 B1 2 pieces, 8.5x6.5 & 7.5x4mm; congested but well preserved 8 Lung Lung 0008952 202 1010 BP-31052 RNA isolation_PAXgene Tissue miRNA 09/12/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988765 382438 0.961873 0.991316 0.732783 25012 1 76 0.00223295 131 0 6.83741e+07 0.0376689 204666 6.89731e+07 4.74158e+06 25042 3.40078e+07 0 0.22909 0.991316 0.72642 6.83741e+07 0.00306284 1.49775e+07 8.72048e+06 1.50479e+07 149 1.50933e+07 9.9496e+06 0.00264683 1.50994e+07 50.0101 0.00296733 0.993867 0 50.1172 GTEX-X5EB-0526-SM-46MVP 1 B1 2 pieces, 11x9 & 10x8mm; well preserved, Islets rare but well seen, delineated, adherent fat ~10% of specimen, rep areas delineated 7.6 Pancreas Pancreas 0001150 204 1008 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988566 220438 0.970625 0.990918 0.826775 21912 1 76 0.00202699 105 0 6.52712e+07 0.0291187 180832 6.58695e+07 4.47422e+06 21927 3.24738e+07 0 0.14385 0.990918 0.819266 6.52712e+07 0.00305482 1.48004e+07 1.64741e+07 1.4941e+07 114 1.4941e+07 1.70547e+07 0.00253968 1.49548e+07 50.0231 0.00274531 0.993269 0 50.2364 GTEX-X5EB-0626-SM-46MVQ 1 B1 2 pieces, 9x7 & 11x8mm; layer of adherent fat delineated, ~0.5mm 8.6 Heart Heart - Atrial Appendage 0006631 206 1006 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991294 409403 0.974913 0.994105 0.846153 21181 1 76 0.00175243 150 0 6.79007e+07 0.0247879 1.20306e+06 6.83033e+07 4.59535e+06 21194 3.37759e+07 0 0.128761 0.994105 0.841164 6.79007e+07 0.0026342 1.46942e+07 8.99196e+06 1.4741e+07 181 1.47458e+07 1.10188e+07 0.00219207 1.48611e+07 50.1947 0.0176135 0.996916 0 50.0795 GTEX-X5EB-0726-SM-46MVR 1 B1 2 pieces, 9x6.5 & 9x8mm; interstitial fibrosis 7.9 Thyroid Thyroid 0002046 214 999 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990132 422991 0.961497 0.992468 0.728936 23775 1 76 0.00198814 130 0 6.93996e+07 0.0382666 221632 6.99263e+07 4.55467e+06 23819 3.45312e+07 0 0.23256 0.992468 0.723446 6.93996e+07 0.00289599 1.51403e+07 9.40043e+06 1.51238e+07 150 1.51705e+07 1.03916e+07 0.002441 1.5252e+07 50.1339 0.00316951 0.994804 0 49.9727 GTEX-X5EB-0826-SM-46MVS 1 B1 2 pieces, 12x7 & 11x10mm; markedly hemorrhagic, acute/ subacute infarct 6.8 Heart Heart - Left Ventricle 0006566 217 997 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 EXCLUDE 0.989495 301088 0.97263 0.992035 0.788207 21862 1 76 0.00191269 130 0 6.6181e+07 0.0272017 939209 6.67124e+07 4.7271e+06 21882 3.29271e+07 0 0.184423 0.992035 0.781929 6.6181e+07 0.00275967 1.47456e+07 8.53095e+06 1.48958e+07 155 1.48698e+07 1.04629e+07 0.0023351 1.49212e+07 50.0863 0.0140785 0.994575 0 50.2534 GTEX-X5EB-0926-SM-46MVT 1 B1 6 pieces, up to 12x5mm; ~10-20% thickness is mucosa, reasonably well preserved 7.9 Colon Colon - Transverse 0001157 220 994 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991117 301048 0.969432 0.993099 0.825022 21344 1 76 0.00183869 131 0 5.80473e+07 0.0303182 354799 5.84506e+07 3.90123e+06 21358 2.89033e+07 0 0.14441 0.993099 0.819329 5.80473e+07 0.00265288 1.25958e+07 7.04304e+06 1.26005e+07 142 1.26026e+07 9.81758e+06 0.00224497 1.27072e+07 50.2067 0.00607007 0.995082 0 50.0093 GTEX-X5EB-1026-SM-46MVU 1 B1 6 pieces, up to 9.5x5mm; all muscularis; good specimens 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 221 994 BP-31131 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991998 279642 0.97255 0.993985 0.827929 20480 1 76 0.00185311 118 0 5.18231e+07 0.0271615 372163 5.21367e+07 3.49138e+06 20487 2.58089e+07 0 0.144621 0.993985 0.822949 5.18231e+07 0.00275407 1.12054e+07 6.11698e+06 1.12582e+07 128 1.1272e+07 8.7216e+06 0.00230269 1.12891e+07 50.0379 0.00713821 0.995972 0 50.1175 GTEX-X5EB-1126-SM-46MVV 1 B1 6 pieces, up to 9x4mm; ~60% muscularis, rep. area delineated; rest is fat and mucosa 8.5 Colon Colon - Sigmoid 0001159 223 992 BP-31129 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.98892 365555 0.964366 0.991201 0.771576 22933 1 76 0.00244985 138 0 5.53291e+07 0.0335653 363421 5.58202e+07 3.71987e+06 22962 2.74767e+07 0 0.192791 0.991201 0.764787 5.53291e+07 0.00336622 1.22486e+07 9.02781e+06 1.22477e+07 131 1.22973e+07 8.29211e+06 0.00290698 1.23206e+07 50.0473 0.00651056 0.993483 0 49.9982 GTEX-X5EB-1426-SM-46MVW 1 B1 6 pieces, up to 9x4mm; all muscularis; good specimens 6.7 Esophagus Esophagus - Muscularis 0004648 240 977 BP-31129 RNA isolation_PAXgene Tissue miRNA 09/14/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991656 344361 0.971272 0.993683 0.818395 21327 1 76 0.00185505 139 0 6.34065e+07 0.0284495 463992 6.38096e+07 4.10610e+06 21341 3.15706e+07 0 0.152877 0.993683 0.813225 6.34065e+07 0.00261407 1.37001e+07 7.04157e+06 1.37435e+07 152 1.37536e+07 1.07614e+07 0.00223378 1.38128e+07 50.1073 0.00727151 0.995709 0 50.0791 GTEX-X5EB-1526-SM-4E3JC 0 B1 6 pieces, up to 4.5x4mm; squamous mucosa is ~10-20% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 243 974 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.988321 756002 0.966636 0.990958 0.820053 24424 1 76 0.00265993 213 0 8.91615e+07 0.0324567 369891 8.99751e+07 9.94764e+06 24453 4.4324e+07 0 0.146583 0.990958 0.812638 8.91615e+07 0.00382007 1.96154e+07 1.67731e+07 1.97002e+07 213 1.97504e+07 1.66174e+07 0.00323846 1.98035e+07 50.0671 0.00411104 0.993594 0 50.1078 GTEX-X5EB-1626-SM-4E3IV 1 B1 6 pieces, up to 7x4mm; ~5-10% lympohid elements, rest is mucosa and muscularis, well preserved 7.8 Small Intestine Small Intestine - Terminal Ileum 0001211 248 970 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986715 787955 0.969263 0.990107 0.819088 24530 1 76 0.00266764 373 0 1.03496e+08 0.0300521 1.02148e+06 1.0453e+08 1.15754e+07 24560 5.13822e+07 0 0.150176 0.990107 0.810985 1.03496e+08 0.0042103 2.28428e+07 1.95866e+07 2.29051e+07 373 2.28726e+07 1.25746e+07 0.00343633 2.32017e+07 50.3571 0.0097721 0.993499 0 50.0681 GTEX-X5EB-1726-SM-4E3J7 1 B1 1 piece, 3x2.5mm; actual glandular tissue is ~2.5x1.5mm, delineated; rest is aderhent sqaumous mucosa/stromal tissue 8.5 Salivary Gland Minor Salivary Gland 0006330 254 964 BP-36201 RNA isolation_PAXgene Tissue miRNA 02/19/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985567 801539 0.962907 0.988978 0.772618 24848 1 76 0.00295826 206 0 9.12201e+07 0.0355071 281516 9.22367e+07 1.06902e+07 24884 4.5252e+07 0 0.190289 0.988978 0.764102 9.12201e+07 0.00443282 2.0113e+07 1.86287e+07 2.01419e+07 215 2.02497e+07 1.41992e+07 0.00369299 2.03229e+07 50.0902 0.0030521 0.992389 0 50.0359 GTEX-X5EB-1826-SM-4E3K8 1 B1 2 pieces, 10x8 & 9x9mm; glandular hyperplasia, fairly well preserved 8.3 Prostate Prostate 0002367 255 964 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986256 546407 0.96184 0.989766 0.754795 24713 1 76 0.00261353 166 0 8.09531e+07 0.0378839 241088 8.17901e+07 9.24832e+06 24748 4.02118e+07 0 0.207045 0.989766 0.747071 8.09531e+07 0.00409589 1.77008e+07 1.13893e+07 1.78437e+07 188 1.78999e+07 1.1279e+07 0.00335208 1.79267e+07 50.0373 0.00294764 0.993276 0 50.2011 GTEX-X5EB-1926-SM-4E3IW 0 B1 6 pieces, up to 8x3mm; squamous epitheium is ~1% thickness 8.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 257 962 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985932 646764 0.968105 0.989198 0.807389 22957 1 76 0.00247278 176 0 7.27748e+07 0.0316852 436793 7.35694e+07 8.31707e+06 22984 3.6158e+07 0 0.160716 0.989198 0.798668 7.27748e+07 0.00396246 1.59552e+07 1.26328e+07 1.60177e+07 173 1.60653e+07 1.22702e+07 0.00321516 1.61522e+07 50.1347 0.00593715 0.992464 0 50.0977 GTEX-X5EB-2026-SM-4E3KA 2 B1 2 pieces, 8.5x7 & 9x8mm; spermatogenesis present, not well preserved 7.7 Testis Testis 0000473 258 962 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987229 821037 0.915992 0.989918 0.702276 33526 1 76 0.00261705 182 0 9.04519e+07 0.0837047 867776 9.13731e+07 1.00529e+07 33590 4.497e+07 0 0.213716 0.989918 0.695195 9.04519e+07 0.00381525 1.85458e+07 1.99736e+07 1.86798e+07 179 1.87905e+07 1.36916e+07 0.00321453 1.86624e+07 49.8291 0.00949706 0.992606 0 50.1799 GTEX-X5EB-2226-SM-46MW4 0 B1 6 pieces, up to 11x3mm; squamous epithelium is ~1% thickness 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 274 947 BP-31273 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.986726 375282 0.968131 0.98952 0.812539 22954 1 76 0.00201608 167 0 6.96947e+07 0.031668 383130 7.04329e+07 4.76844e+06 22969 3.46525e+07 0 0.155592 0.98952 0.804023 6.96947e+07 0.00302831 1.52077e+07 9.96197e+06 1.52637e+07 169 1.5309e+07 1.18957e+07 0.00252076 1.53565e+07 50.0775 0.00543965 0.992313 0 50.0919 GTEX-X5EB-2326-SM-46MW5 0 B1 2 pieces, 11x9 7 13x8.5mm; ~ 10% interstital fat, rep. area delineated 8.2 Muscle Muscle - Skeletal 0011907 279 943 BP-31273 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990854 282551 0.979517 0.993392 0.866703 18235 1 76 0.00171604 119 0 5.71094e+07 0.0202992 650974 5.74893e+07 3.75353e+06 18242 2.84157e+07 0 0.112814 0.993392 0.860976 5.71094e+07 0.00264831 1.23618e+07 7.68135e+06 1.23964e+07 143 1.23612e+07 1.05617e+07 0.00218099 1.25316e+07 50.3422 0.0113234 0.99593 0 50.0699 GTEX-X5EB-2426-SM-4E3HX 0 B1 2 pieces, 10x9 & 10x8mm; 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 283 939 BP-36136 RNA isolation_PAXgene Tissue miRNA 02/14/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986973 577050 0.969957 0.99044 0.795304 23856 1 76 0.0025168 215 0 9.46167e+07 0.0297926 463679 9.55299e+07 9.90112e+06 23889 4.70095e+07 0 0.174653 0.99044 0.787702 9.46167e+07 0.00424487 2.06584e+07 1.23315e+07 2.07175e+07 239 2.07915e+07 1.56521e+07 0.00337781 2.09068e+07 50.1383 0.00485376 0.993908 0 50.0713 GTEX-X5EB-2526-SM-4E3HY 0 B1 2 pieces, 6x2 & 5.5x3mm; minimal adherent discontinuous fat on one ~0.5mm, delineated 7.8 Nerve Nerve - Tibial 0001323 284 939 BP-36136 RNA isolation_PAXgene Tissue miRNA 02/14/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.987056 541960 0.965263 0.990228 0.760707 24626 1 76 0.00259872 292 0 1.00401e+08 0.0344339 249054 1.01392e+08 1.15674e+07 24673 4.99166e+07 0 0.204556 0.990228 0.753274 1.00401e+08 0.00380653 2.20079e+07 1.2827e+07 2.21158e+07 270 2.22269e+07 1.6329e+07 0.00320069 2.22064e+07 49.977 0.00245635 0.993399 0 50.1223 GTEX-X5EB-2626-SM-4E3HZ 0 B1 2 pieces, 2x2 & 2x2mm; good clean specimen; no fat 8 Blood Vessel Artery - Tibial 0007610 288 935 BP-36136 RNA isolation_PAXgene Tissue miRNA 02/14/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988936 582824 0.971984 0.991698 0.82715 22049 1 76 0.00243967 275 0 1.04291e+08 0.0276424 449995 1.05165e+08 1.16006e+07 22081 5.18675e+07 0 0.144834 0.991698 0.820282 1.04291e+08 0.00356775 2.2437e+07 1.20219e+07 2.25971e+07 304 2.2656e+07 1.9447e+07 0.00300214 2.26555e+07 49.9994 0.00427896 0.994459 0 50.1778 GTEX-X62O-0001-SM-3PYL1 C1 Blood Whole Blood 0013756 726 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763068_R04C01 GTEX-X62O-0001-SM-3PZ7O C1 Blood Whole Blood 0013756 726 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340004_R04C01 GTEX-X62O-0001-SM-3USR7 C1 Blood Whole Blood 0013756 726 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-X62O-0001-SM-58Q8X C1 Blood Whole Blood 0013756 726 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X62O-0001-SM-5URD5 C1 Blood Whole Blood 0013756 726 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 LCSET-5270,LCSET-5895 08/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X62O-0005-SM-46MV1 C1 8.9 Blood Whole Blood 0013756 726 BP-29769 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.985584 359076 0.97337 0.988754 0.72709 19499 1 76 0.00250197 106 0 6.45137e+07 0.0261737 203964 6.52475e+07 4.38709e+06 19518 3.20319e+07 0 0.24628 0.988754 0.718913 6.45137e+07 0.00369488 1.45825e+07 3.98041e+07 1.4615e+07 118 1.47236e+07 1.20045e+07 0.00309651 1.46822e+07 49.9296 0.003126 0.991924 0 50.0556 GTEX-X62O-0008-SM-46MU5 C1 7.8 Skin Cells - Cultured fibroblasts EFO_0002009 852 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991817 544401 0.968798 0.994101 0.82633 20743 1 76 0.00177076 163 0 6.4763e+07 0.0308126 249556 6.51473e+07 4.272e+06 20758 3.22232e+07 0 0.142468 0.994101 0.821456 6.4763e+07 0.00262553 1.43491e+07 7.13092e+06 1.44024e+07 153 1.44911e+07 1.25587e+07 0.00219717 1.43914e+07 49.8274 0.00383064 0.996384 0 50.0927 GTEX-X62O-0126-SM-4E3JN 1 C1 6 pieces, up to 7x2mm; squamous epitheiium is ~2% of thickness 6.4 Skin Skin - Sun Exposed (Lower leg) 0004264 851 793 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985035 580326 0.969253 0.988868 0.724597 25322 1 76 0.00267215 170 0 8.93632e+07 0.030519 855781 9.03691e+07 9.81431e+06 25370 4.43623e+07 0 0.244656 0.988868 0.716531 8.93632e+07 0.00417164 1.96769e+07 1.32097e+07 1.97429e+07 200 1.98407e+07 1.2561e+07 0.00341898 1.99154e+07 50.0939 0.00946984 0.992701 0 50.0837 GTEX-X62O-0226-SM-4E3JB 1 C1 2 pieces, 8x6 & 9x8mm; 50% fibirous tissue, rep areas delineated. Contaminant squamous epithelium, encircled 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 852 792 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.9864 550080 0.971711 0.989972 0.744229 25198 1 76 0.00267055 205 0 9.24609e+07 0.028 709505 9.33975e+07 1.07944e+07 25252 4.59303e+07 0 0.227482 0.989972 0.736766 9.24609e+07 0.00379303 2.03411e+07 1.27258e+07 2.04242e+07 210 2.05388e+07 1.42921e+07 0.00322976 2.05507e+07 50.0145 0.00759662 0.993543 0 50.1019 GTEX-X62O-0526-SM-EWRMA 2 C1 2 pieces, 7x6 & 8.5x6mm; all adipose tissue, not ductal elements noted 5.5 Breast Breast - Mammary Tissue 0008367 876 770 BP-31241 RNA isolation_PAXgene Tissue miRNA 09/18/2012 LCSET-10520 05/27/2017 TruSeq.v1 RNASEQ 0.982984 315011 0.975119 0.985974 0.80175 23613 1 76 0.00233159 212 0 8.90161e+07 0.0245667 645248 9.02824e+07 5.87948e+06 23643 4.4251e+07 0 0.173369 0.985974 0.790504 8.90161e+07 0.00345831 1.94621e+07 1.09967e+07 1.97033e+07 225 1.97072e+07 1.54044e+07 0.00288007 1.97054e+07 49.9978 0.007147 0.988963 0 50.308 GTEX-X62O-0626-SM-EVR34 3 C1 2 pieces, 7x6 & 7x6mm; unusually badly autolyzed, diffuse Hashimoto thyroiditis with regressive changes 5.5 Thyroid Thyroid 0002046 885 762 BP-31241 RNA isolation_PAXgene Tissue miRNA 09/18/2012 LCSET-10519 05/07/2017 TruSeq.v1 EXCLUDE 0.977604 365100 0.959873 0.979767 0.7758 24836 1 76 0.00267794 206 0 8.50589e+07 0.0390556 4.77462e+06 8.68154e+07 6.17747e+06 24869 4.22441e+07 0 0.184073 0.979767 0.760104 8.50589e+07 0.00456488 1.85166e+07 1.64011e+07 1.87602e+07 218 1.87214e+07 1.1236e+07 0.00361933 1.87354e+07 50.0187 0.0549975 0.981931 0 50.3268 GTEX-X62O-0826-SM-46MW8 2 C1 2 pieces, 8x7 & 7x7mm; 8.5 Heart Heart - Atrial Appendage 0006631 893 755 BP-31241 RNA isolation_PAXgene Tissue miRNA 09/18/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990919 396648 0.971438 0.993008 0.790777 21694 1 76 0.00197006 108 0 5.85572e+07 0.0283153 578585 5.89695e+07 3.75617e+06 21708 2.91390e+07 0 0.180661 0.993008 0.785248 5.85572e+07 0.00278124 1.25254e+07 7.95977e+06 1.25351e+07 128 1.25856e+07 1.07121e+07 0.0023748 1.25959e+07 50.0203 0.0098116 0.995097 0 50.0194 GTEX-X62O-1626-SM-46MW9 1 C1 2 pieces, 3x3 & 3x3mm; good clean specimens 8.4 Blood Vessel Artery - Tibial 0007610 934 719 BP-31298 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989628 343173 0.970054 0.99211 0.799543 20745 1 76 0.00213412 128 0 5.83173e+07 0.029525 266535 5.8781e+07 4.10672e+06 20756 2.89945e+07 0 0.170511 0.99211 0.793235 5.83173e+07 0.00314382 1.25111e+07 6.1253e+06 1.25398e+07 133 1.25916e+07 1.05227e+07 0.00263771 1.26006e+07 50.0177 0.00453437 0.994592 0 50.0573 GTEX-X62O-2226-SM-46MW3 2 C1 6 pieces, up to 7x3mm; 7.7 Esophagus Esophagus - Mucosa 0006920 952 704 BP-31409 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.983727 258759 0.966688 0.986433 0.781442 21863 1 76 0.00201793 127 0 6.21503e+07 0.0331263 604353 6.30051e+07 4.22997e+06 21874 3.09096e+07 0 0.185246 0.986433 0.77084 6.21503e+07 0.002935 1.39035e+07 9.60024e+06 1.3972e+07 158 1.40031e+07 7.85809e+06 0.0024752 1.40378e+07 50.0618 0.00959213 0.989138 0 50.1229 GTEX-X62O-2426-SM-EAZB4 2 C1 6 pieces, up to 7x4mm; all muscularis, good specimens 5.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 955 703 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.982549 257388 0.970544 0.983342 0.780945 23178 1 76 0.0020812 196 0 8.14839e+07 0.0292401 915101 8.28642e+07 6.4363e+06 23205 4.05885e+07 0 0.189599 0.983342 0.767936 8.14839e+07 0.00316882 1.78572e+07 1.02018e+07 1.80314e+07 203 1.79181e+07 1.27307e+07 0.00262457 1.80409e+07 50.1707 0.0110434 0.984135 0 50.2427 GTEX-X638-0003-SM-47JZ1 B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -270 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988121 1.73419e+06 0.954598 0.991223 0.777785 21673 1 76 0.00289516 146 0 7.47861e+07 0.0446906 460341 7.54483e+07 8.69398e+06 21702 3.71474e+07 0 0.176813 0.991223 0.770959 7.47861e+07 0.00330099 1.64004e+07 1.07135e+07 1.63738e+07 144 1.6491e+07 1.66502e+07 0.00309744 1.65077e+07 50.0252 0.00610141 0.994326 0 49.9595 GTEX-X638-0004-SM-4YUV8_1 B1 Blood Whole Blood 0013756 -270 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-X638-0004-SM-53IUI B1 Blood Whole Blood 0013756 -270 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X638-0004-SM-DLIPT B1 Blood Whole Blood 0013756 -270 BP-29731 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/20/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-X638-0005-SM-47JX6 B1 8.7 Blood Whole Blood 0013756 -270 BP-29769 RNA isolation_PAXgene Blood RNA (Manual) 08/20/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.972119 430948 0.972517 0.976628 0.804405 19628 1 76 0.00285199 107 0 7.4411e+07 0.026431 143411 7.61918e+07 7.94514e+06 19637 3.68858e+07 0 0.168112 0.976628 0.785604 7.4411e+07 0.00418437 1.70252e+07 8.45981e+07 1.71496e+07 123 1.72809e+07 1.81468e+07 0.0035151 1.72526e+07 49.959 0.00188224 0.981136 0 50.1821 GTEX-X638-0008-SM-47JZ7 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 39 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.990009 449230 0.97208 0.992505 0.81121 21471 1 76 0.00246436 155 0 7.1844e+07 0.0275226 278371 7.23865e+07 7.62428e+06 21490 3.57278e+07 0 0.16087 0.992505 0.80513 7.1844e+07 0.00291635 1.5931e+07 8.29297e+06 1.59346e+07 150 1.60103e+07 1.5431e+07 0.00268979 1.60323e+07 50.0344 0.00384562 0.995001 0 50.0056 GTEX-X638-0126-SM-47JZ8 0 B1 6 pieces, up to 8x3.5mm; All have considerable subcutaneous adipose up to 3.5x 1 mm. 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 42 1048 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98995 438131 0.966035 0.992379 0.799184 23739 1 76 0.00275333 165 0 7.22416e+07 0.0337569 603988 7.27963e+07 8.09049e+06 23762 3.59258e+07 0 0.166851 0.992379 0.793094 7.22416e+07 0.00319499 1.56921e+07 1.0832e+07 1.57147e+07 168 1.57219e+07 1.16239e+07 0.00297362 1.58623e+07 50.2224 0.00829696 0.994808 0 50.0359 GTEX-X638-0226-SM-47JZ9 1 B1 2 pieces, 11x8 & 12x8mm; Small artefactual holes 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 46 1044 BP-36063 RNA isolation_PAXgene Tissue miRNA 02/12/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988709 452323 0.968157 0.991121 0.80593 23927 1 76 0.00281237 197 0 8.11278e+07 0.0316077 781716 8.18546e+07 8.88071e+06 23947 4.03282e+07 0 0.162227 0.991121 0.798774 8.11278e+07 0.00324875 1.76687e+07 9.65879e+06 1.77062e+07 203 1.76821e+07 1.23994e+07 0.00303003 1.78855e+07 50.2859 0.00955005 0.993532 0 50.0529 GTEX-X638-0326-SM-47JY1 1 B1 2 pieces 11x8 & 13x8mm; Fatty infiltration among muscle fibers and degenerating fibers probably due to chronic ischemia and atrophy. 8.2 Muscle Muscle - Skeletal 0011907 53 1037 BP-31298 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.990387 389729 0.971361 0.993223 0.838437 21085 1 76 0.00261941 134 0 6.84355e+07 0.0283763 1.05008e+06 6.89024e+07 7.91922e+06 21106 3.40382e+07 0 0.132924 0.993223 0.832755 6.84355e+07 0.00290333 1.47797e+07 9.74920e+06 1.47527e+07 152 1.47622e+07 1.30932e+07 0.00276096 1.49532e+07 50.3212 0.0152402 0.99606 0 49.9542 GTEX-X638-0426-SM-47JY2 0 B1 2 pieces, 5.5x3 & 5x3.5mm; Up to 20% internal and extraneous adipose. 7.1 Nerve Nerve - Tibial 0001323 57 1033 BP-31298 RNA isolation_PAXgene Tissue miRNA 09/19/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988309 289798 0.958796 0.99105 0.742844 24099 1 76 0.00279338 133 0 6.43943e+07 0.0410031 418400 6.49758e+07 7.09415e+06 24127 3.20137e+07 0 0.215952 0.99105 0.736196 6.43943e+07 0.00333455 1.39993e+07 7.79882e+06 1.4043e+07 143 1.40672e+07 8.55809e+06 0.00306321 1.41488e+07 50.1446 0.00643932 0.993791 0 50.0779 GTEX-X88G-0003-SM-4YUXA_1 B1 Blood Whole Blood 0013756 -94 BP-30004 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/23/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-X88G-0003-SM-53IVK B1 Blood Whole Blood 0013756 -94 BP-30004 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/23/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-X88G-0003-SM-DLIPW B1 Blood Whole Blood 0013756 -94 BP-30004 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/23/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-X88G-0004-SM-47JZ6 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -94 BP-32684 RNA isolation_Trizol Manual (Cell Pellet) 10/31/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98825 540100 0.968379 0.991588 0.810573 20688 1 76 0.00271283 138 0 6.72067e+07 0.0311342 392479 6.77768e+07 7.50168e+06 20706 3.3385e+07 0 0.157806 0.991588 0.803754 6.72067e+07 0.00319177 1.49229e+07 9.7074e+06 1.49342e+07 136 1.50323e+07 1.56508e+07 0.0029515 1.50438e+07 50.0192 0.00579075 0.994926 0 50.0189 GTEX-X88G-0006-SM-47JX5 B1 8.1 Blood Whole Blood 0013756 -64 BP-30089 RNA isolation_PAXgene Blood RNA (Manual) 08/24/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.984727 1.81776e+06 0.916554 0.988283 0.755284 20085 1 76 0.0030709 122 0 7.12086e+07 0.0821779 231046 7.20528e+07 7.47208e+06 20098 3.5334e+07 0 0.16127 0.988283 0.746435 7.12086e+07 0.00374371 1.49697e+07 6.61421e+07 1.50245e+07 131 1.51076e+07 1.39402e+07 0.00340609 1.51992e+07 50.1511 0.00320662 0.99184 0 50.0913 GTEX-X88G-0008-SM-47JWN B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 126 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989392 641527 0.979754 0.992803 0.86419 20688 1 76 0.00227572 172 0 8.5655e+07 0.0198931 244798 8.62759e+07 9.69989e+06 20703 4.25679e+07 0 0.115565 0.992803 0.85797 8.5655e+07 0.00272442 1.92837e+07 1.07934e+07 1.92847e+07 185 1.94433e+07 2.26274e+07 0.0024993 1.94127e+07 49.9606 0.00283739 0.996215 0 50.0013 GTEX-X88G-0126-SM-47JZ3 0 B1 6 pieces ~8x4mm. Squamous epithelium is ~2% thickness. Small nubbins of adherent fat, delineated 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 130 1147 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986208 358845 0.97372 0.990499 0.852108 22445 1 76 0.0026748 177 0 7.1276e+07 0.0260081 492286 7.19597e+07 7.95667e+06 22462 3.53816e+07 0 0.121612 0.990499 0.844012 7.1276e+07 0.00339366 1.56059e+07 9.21757e+06 1.55818e+07 176 1.56522e+07 1.28087e+07 0.00303267 1.58346e+07 50.2897 0.00684113 0.99479 0 49.9613 GTEX-X88G-0226-SM-4GIE4 0 B1 2 pieces ~11x9mm 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 132 1147 BP-31842 RNA isolation_PAXgene Tissue miRNA 10/05/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987243 390738 0.971131 0.990227 0.806224 22815 1 76 0.00250009 152 0 7.17958e+07 0.0286318 302076 7.25043e+07 7.27785e+06 22834 3.56938e+07 0 0.164906 0.990227 0.798345 7.17958e+07 0.003801 1.57125e+07 8.97319e+06 1.58095e+07 170 1.58332e+07 1.16887e+07 0.00314858 1.59042e+07 50.1119 0.00416632 0.993211 0 50.1538 GTEX-X88G-0326-SM-47JZ4 0 B1 2 pieces ~10x6mm, ~5-10% interstital fat, rep. areas delineated 7.4 Muscle Muscle - Skeletal 0011907 138 1143 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.99033 342118 0.974869 0.993114 0.83581 21781 1 76 0.00242213 136 0 7.0612e+07 0.0248925 450498 7.11016e+07 7.79715e+06 21800 3.51243e+07 0 0.139059 0.993114 0.830055 7.0612e+07 0.00288702 1.53617e+07 8.07835e+06 1.53334e+07 162 1.53476e+07 1.3553e+07 0.00265392 1.55343e+07 50.3022 0.00633598 0.995899 0 49.9538 GTEX-X88G-0426-SM-47JZ5 0 B1 2 pieces ~5mm d. Adherent fibroadipose tissue, discontinuous, delineated, up to ~2mm 6.8 Blood Vessel Artery - Tibial 0007610 144 1139 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989591 297965 0.970864 0.992259 0.815366 22572 1 76 0.00253044 158 0 7.19162e+07 0.0288179 209158 7.24772e+07 7.91275e+06 22590 3.57531e+07 0 0.155498 0.992259 0.809055 7.19162e+07 0.00295608 1.5499e+07 6.24217e+06 1.55244e+07 171 1.55657e+07 1.24925e+07 0.00274269 1.56479e+07 50.1318 0.00288585 0.994928 0 50.041 GTEX-X8HC-0003-SM-3PYKU C1 Blood Whole Blood 0013756 657 BP-30211 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763137_R06C01 GTEX-X8HC-0003-SM-3PZ7F C1 Blood Whole Blood 0013756 657 BP-30211 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340006_R02C01 GTEX-X8HC-0003-SM-3UZEU C1 Blood Whole Blood 0013756 657 BP-30211 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2012 LCSET-2665 01/19/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-X8HC-0003-SM-58Q8Y C1 Blood Whole Blood 0013756 657 BP-30211 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-X8HC-0003-SM-5URDI C1 Blood Whole Blood 0013756 657 BP-30211 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 08/27/2012 LCSET-5270,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-X8HC-0006-SM-46MV6 C1 8 Blood Whole Blood 0013756 657 BP-30236 RNA isolation_PAXgene Blood RNA (Manual) 08/28/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.97502 392205 0.975002 0.978175 0.797445 18743 1 76 0.00214159 98 0 6.74871e+07 0.0243937 164826 6.89929e+07 5.27061e+06 18751 3.35206e+07 0 0.177557 0.978175 0.78004 6.74871e+07 0.00348351 1.55733e+07 8.41805e+07 1.57768e+07 116 1.58778e+07 1.65751e+07 0.00281038 1.5701e+07 49.72 0.00238903 0.98133 0 50.3246 GTEX-X8HC-0008-SM-46MU6 C1 7.9 Skin Cells - Cultured fibroblasts EFO_0002009 749 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.991386 492375 0.968364 0.993535 0.828101 21211 1 76 0.00195997 224 0 7.65376e+07 0.0312739 279271 7.70356e+07 5.09125e+06 21231 3.80977e+07 0 0.140263 0.993535 0.822748 7.65376e+07 0.00263277 1.69392e+07 9.11252e+06 1.69972e+07 203 1.71242e+07 1.48592e+07 0.00229564 1.69575e+07 49.7555 0.00362522 0.995685 0 50.0854 GTEX-X8HC-0126-SM-4E3JW 1 C1 6 pieces, up to 8x4mm; 3 with 1 mm subcutaneous adipose 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 749 921 BP-36259 RNA isolation_PAXgene Tissue miRNA 02/20/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985833 674131 0.968263 0.98916 0.797672 23135 1 76 0.00272274 172 0 8.12362e+07 0.0315575 899120 8.21265e+07 9.0827e+06 23161 4.03562e+07 0 0.170591 0.98916 0.789025 8.12362e+07 0.00402476 1.78605e+07 1.44144e+07 1.79365e+07 195 1.79874e+07 1.28429e+07 0.00337156 1.80827e+07 50.132 0.010948 0.992486 0 50.1061 GTEX-X8HC-0226-SM-4E3K1 1 C1 2 pieces, 11x7 & 8x7mm; No defects 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 752 919 BP-36259 RNA isolation_PAXgene Tissue miRNA 02/20/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988108 469980 0.973159 0.990919 0.764104 22692 1 76 0.00275231 167 0 8.51453e+07 0.0266217 620834 8.59256e+07 9.14239e+06 22726 4.23378e+07 0 0.209055 0.990919 0.757165 8.51453e+07 0.00405397 1.87164e+07 1.2324e+07 1.87621e+07 200 1.88222e+07 1.22997e+07 0.0034013 1.88951e+07 50.0966 0.00722525 0.993731 0 50.0609 GTEX-X8HC-0526-SM-4E3JA 1 C1 2 pieces, 8x7 & 9x6mm; 10% internal adipose. 8.6 Muscle Muscle - Skeletal 0011907 764 908 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988996 733398 0.97442 0.992134 0.847302 21675 1 76 0.0025791 278 0 1.05096e+08 0.0253873 882340 1.05929e+08 1.13315e+07 21695 5.22593e+07 0 0.127119 0.992134 0.840637 1.05096e+08 0.00400993 2.28731e+07 1.59863e+07 2.30112e+07 312 2.31281e+07 2.04233e+07 0.00329225 2.30709e+07 49.9381 0.00832952 0.995273 0 50.1505 GTEX-X8HC-0626-SM-4E3HQ 1 C1 6 pieces, up to 10x3.5mm; Subcutaneous adipose up to 1 mm on all. 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 769 904 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985504 561539 0.973291 0.988419 0.754274 23842 1 76 0.00277168 196 0 8.79172e+07 0.0265177 1.00719e+06 8.89473e+07 9.3181e+06 23875 4.36862e+07 0 0.219017 0.988419 0.745539 8.79172e+07 0.00410917 1.94555e+07 1.2829e+07 1.95896e+07 203 1.9631e+07 1.28931e+07 0.00343845 1.9671e+07 50.0509 0.0113234 0.991333 0 50.1717 GTEX-X8HC-0726-SM-46MWG 2 C1 2 pieces, 8x7 & 7x7mm; 6.9 Thyroid Thyroid 0002046 779 894 BP-31492 RNA isolation_PAXgene Tissue miRNA 09/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988125 303711 0.961986 0.990651 0.704468 24287 1 76 0.00225851 135 0 7.51398e+07 0.0377691 213540 7.58489e+07 5.49275e+06 24327 3.73596e+07 0 0.257518 0.990651 0.697882 7.51398e+07 0.00315507 1.63664e+07 8.90203e+06 1.64106e+07 158 1.64719e+07 1.00559e+07 0.00270565 1.64883e+07 50.025 0.00281533 0.993177 0 50.0674 GTEX-X8HC-1026-SM-46MWH 1 C1 2 pieces, 9x7 & 10x8mm; 0.5 mm thick epicardium on one. 7.6 Heart Heart - Atrial Appendage 0006631 785 890 BP-31492 RNA isolation_PAXgene Tissue miRNA 09/26/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.99065 387800 0.975203 0.992971 0.777694 21041 1 76 0.00225856 123 0 6.71415e+07 0.0242298 1.83177e+06 6.76168e+07 4.35773e+06 21058 3.33806e+07 0 0.197509 0.992971 0.772228 6.71415e+07 0.00311805 1.43594e+07 8.65152e+06 1.44045e+07 152 1.44375e+07 9.97378e+06 0.0026873 1.44752e+07 50.0652 0.0270905 0.995293 0 50.0785 GTEX-X8HC-1326-SM-46MWB 2 C1 6 pieces, up to 8x3.5mm; Muscle (target) with prominent fibrous stroma up to 2 mm thick (annotated). 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 793 884 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.98847 381910 0.96794 0.990804 0.756866 23052 1 76 0.00218264 136 0 6.8892e+07 0.0318471 431256 6.95314e+07 4.76299e+06 23084 3.42612e+07 0 0.211074 0.990804 0.749906 6.8892e+07 0.00304996 1.50182e+07 8.95996e+06 1.50744e+07 154 1.51084e+07 1.05263e+07 0.00261528 1.51448e+07 50.0601 0.00620232 0.993139 0 50.0934 GTEX-X8HC-1426-SM-46MWC 2 C1 6 pieces, up to 7x2mm; Superficial sloughing. 7.6 Esophagus Esophagus - Mucosa 0006920 794 884 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 EXCLUDE 0.984356 343880 0.963125 0.986608 0.770254 23159 1 76 0.00228698 136 0 6.6662e+07 0.0366769 671743 6.75669e+07 4.81618e+06 23187 3.31567e+07 0 0.192871 0.986608 0.759939 6.6662e+07 0.00309834 1.43483e+07 9.68268e+06 1.44467e+07 158 1.44541e+07 9.07409e+06 0.00269174 1.44919e+07 50.0653 0.0099419 0.98886 0 50.1708 GTEX-X8HC-1526-SM-46MWD 2 C1 6 pieces, up to 8x4mm; Well dissected muscle. 8.1 Esophagus Esophagus - Muscularis 0004648 796 883 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.990031 367560 0.96725 0.992254 0.768197 21591 1 76 0.00217421 117 0 5.75979e+07 0.0325377 352732 5.80475e+07 3.88272e+06 21610 2.86468e+07 0 0.199053 0.992254 0.762246 5.75979e+07 0.00305282 1.2407e+07 7.45348e+06 1.24402e+07 130 1.24677e+07 8.99402e+06 0.00261253 1.25103e+07 50.0852 0.00607661 0.994477 0 50.0668 GTEX-X8HC-1626-SM-46MWE 1 C1 2 pieces, 9x7 & 9.5x8mm; Well dissected muscle. 7 Heart Heart - Left Ventricle 0006566 801 879 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.989988 239905 0.977393 0.992598 0.850932 19658 1 76 0.00254056 118 0 5.72969e+07 0.022495 2.62469e+06 5.77242e+07 3.85226e+06 19667 2.8504e+07 0 0.12646 0.992598 0.844634 5.72969e+07 0.00344348 1.28219e+07 8.74716e+06 1.28731e+07 160 1.28425e+07 5.81145e+06 0.00299083 1.29869e+07 50.2795 0.0454694 0.995209 0 50.0997 GTEX-X8HC-2326-SM-4QAS4 1 C1 2 pieces, 8x7 & 10x7mm; Central defects up to 3.8 x 1 mm. 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 822 868 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988824 478442 0.977173 0.99125 0.795273 21725 1 76 0.00200936 148 0 6.94929e+07 0.0225221 197745 7.01064e+07 3.75721e+06 21746 3.45346e+07 0 0.1819 0.99125 0.788315 6.94929e+07 0.00268002 1.5358e+07 9.69824e+06 1.54293e+07 161 1.54776e+07 1.26314e+07 0.00234387 1.54837e+07 50.0099 0.00282064 0.993676 0 50.1158 GTEX-X8HC-2726-SM-46MUA 1 C1 2 pieces, 9.5x7 & 10x8mm; Atrophic; corpora albicans. 7.2 Ovary Ovary 0000992 832 861 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.98447 208746 0.966658 0.98668 0.731257 21802 1 76 0.00215202 129 0 6.01047e+07 0.0331191 71601 6.09162e+07 3.94544e+06 21828 2.98848e+07 0 0.235401 0.98668 0.721517 6.01047e+07 0.00297668 1.30387e+07 8.61432e+06 1.31473e+07 127 1.31654e+07 1.06671e+07 0.00256343 1.31589e+07 49.9876 0.0011754 0.98889 0 50.2074 GTEX-X8HC-2826-SM-46MWJ 1 C1 6 pieces, up to 7x3mm; 1 of 6 without epithelium. 6.4 Vagina Vagina 0000996 834 860 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.988276 276459 0.974918 0.990473 0.748922 21558 1 76 0.00218958 118 0 5.77077e+07 0.0248894 216386 5.82628e+07 3.89111e+06 21578 2.86996e+07 0 0.225996 0.990473 0.741787 5.77077e+07 0.0031371 1.28739e+07 7.04179e+06 1.29335e+07 128 1.29676e+07 9.3322e+06 0.00266229 1.29706e+07 50.0057 0.00371397 0.99267 0 50.1155 GTEX-XAJ8-0001-SM-3PYK8 B1 Blood Whole Blood 0013756 -80 BP-30377 DNA Isolation of Compromised Blood with Autopure 08/30/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R02C01 GTEX-XAJ8-0001-SM-3PZ7B B1 Blood Whole Blood 0013756 -80 BP-30377 DNA Isolation of Compromised Blood with Autopure 08/30/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340005_R02C01 GTEX-XAJ8-0001-SM-3USR2 B1 Blood Whole Blood 0013756 -80 BP-30377 DNA Isolation of Compromised Blood with Autopure 08/30/2012 LCSET-2654,LCSET-2791 02/22/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-XAJ8-0001-SM-58Q94 B1 Blood Whole Blood 0013756 -80 BP-30377 DNA Isolation of Compromised Blood with Autopure 08/30/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XAJ8-0001-SM-5URBF B1 Blood Whole Blood 0013756 -80 BP-30377 DNA Isolation of Compromised Blood with Autopure 08/30/2012 LCSET-5270,LCSET-5432 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XAJ8-0006-SM-46MVM B1 7.3 Blood Whole Blood 0013756 -80 BP-30451 RNA isolation_PAXgene Blood RNA (Manual) 08/31/2012 LCSET-2933 04/16/2013 TruSeq.v1 RNASEQ 0.987562 663678 0.952999 0.989632 0.826085 17966 1 76 0.0025916 115 0 6.08025e+07 0.0465066 403550 6.14395e+07 4.15927e+06 17976 3.02439e+07 0 0.126914 0.989632 0.81752 6.08025e+07 0.00376592 1.31118e+07 2.74725e+07 1.32078e+07 129 1.3258e+07 1.23019e+07 0.00317753 1.32007e+07 49.8918 0.00656825 0.991702 0 50.1824 GTEX-XAJ8-0008-SM-46MU7 B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 173 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2933 04/16/2013 TruSeq.v1 EXCLUDE 0.98014 249560 0.961798 0.982608 0.853671 19988 1 76 0.00185899 221 0 7.13934e+07 0.0379554 212514 7.26571e+07 5.13972e+06 19998 3.55171e+07 0 0.108127 0.982608 0.838823 7.13934e+07 0.00256609 1.51343e+07 1.20957e+07 1.53912e+07 233 1.5307e+07 1.14525e+07 0.00221165 1.53998e+07 50.1511 0.00292489 0.985075 0 50.4209 GTEX-XAJ8-0126-SM-47JYG 1 B1 2 pieces ~9x6; well preserved 8.1 Spleen Spleen 0002106 118 1140 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.985816 392619 0.962666 0.989713 0.792317 23100 1 76 0.00287434 124 0 6.32619e+07 0.036464 491475 6.39194e+07 6.93236e+06 23122 3.13919e+07 0 0.170348 0.989713 0.784167 6.32619e+07 0.00355579 1.39112e+07 1.04136e+07 1.38988e+07 141 1.39745e+07 1.03602e+07 0.00321372 1.40816e+07 50.1909 0.00768898 0.993611 0 49.9778 GTEX-XAJ8-0226-SM-4GIB2 0 B1 2 pieces ~14.x9mm 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 123 1135 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987179 616084 0.972303 0.990034 0.842899 22319 1 76 0.00232727 187 0 7.94486e+07 0.0274309 559656 8.02484e+07 7.76558e+06 22342 3.94976e+07 0 0.129404 0.990034 0.834498 7.94486e+07 0.00383966 1.7435e+07 1.08158e+07 1.7615e+07 209 1.76128e+07 1.30317e+07 0.00308128 1.76672e+07 50.0771 0.00697404 0.992888 0 50.2568 GTEX-XAJ8-0326-SM-47JYI 1 B1 6 pieces up to ~6x3mm. Muscosa either sloughed or absent, muscualris only 8.2 Stomach Stomach 0000945 128 1130 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987669 434300 0.969509 0.991062 0.809216 22693 1 76 0.00241292 145 0 6.94255e+07 0.0301966 320892 7.00516e+07 7.80548e+06 22716 3.44901e+07 0 0.160293 0.991062 0.801983 6.94255e+07 0.00303551 1.51787e+07 9.18656e+06 1.51736e+07 160 1.52187e+07 1.19566e+07 0.00272315 1.5367e+07 50.2424 0.0045808 0.994455 0 49.9916 GTEX-XAJ8-0426-SM-47JYJ 1 B1 6 pieces ~7x3mm; mucosa well preserved but less than 10% total tissue, some aliquots have none 9 Colon Colon - Transverse 0001157 132 1127 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988134 468946 0.972435 0.991771 0.833123 21490 1 76 0.00228778 138 0 6.54574e+07 0.0273224 199536 6.60005e+07 7.01896e+06 21505 3.25251e+07 0 0.139313 0.991771 0.826267 6.54574e+07 0.00294511 1.43082e+07 8.626e+06 1.42733e+07 147 1.43195e+07 1.26086e+07 0.00261524 1.44981e+07 50.3098 0.00302325 0.995409 0 49.939 GTEX-XAJ8-0526-SM-47JYK 1 B1 6 pieces ~6x2mm. Extremely well preserved; mainly mucosa with lymphoid aggregates ~30-40% total specimen, representative foci delineated 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 138 1121 BP-31440 RNA isolation_PAXgene Tissue miRNA 09/25/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.985441 487864 0.966171 0.989437 0.768321 24607 1 76 0.00284406 137 0 7.31759e+07 0.0329101 487702 7.39571e+07 8.2994e+06 24643 3.62966e+07 0 0.19785 0.989437 0.760205 7.31759e+07 0.00347633 1.61967e+07 1.03427e+07 1.61695e+07 162 1.62657e+07 1.08045e+07 0.00315892 1.63837e+07 50.1807 0.00659439 0.993432 0 49.9579 GTEX-XAJ8-0626-SM-47JY4 1 B1 2 pieces ~11x5mm, patchy glandular hyperplasia and atrophy. Remarkably well-preserved glands 6.4 Prostate Prostate 0002367 143 1117 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98567 405280 0.962216 0.989482 0.750425 24703 1 76 0.00260058 134 0 7.22608e+07 0.0375808 416461 7.30289e+07 8.59997e+06 24743 3.58729e+07 0 0.21179 0.989482 0.742532 7.22608e+07 0.00323609 1.56766e+07 9.30008e+06 1.57777e+07 162 1.58327e+07 9.994e+06 0.00291711 1.58935e+07 50.0958 0.00570269 0.993293 0 50.1607 GTEX-XAJ8-0726-SM-47JY5 1 B1 6 pieces up to ~8x3mm, all muscularis, excellent specimens 7.3 Colon Colon - Sigmoid 0001159 151 1109 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988573 481879 0.970718 0.991805 0.821115 22174 1 76 0.00239988 146 0 6.87376e+07 0.0290256 388114 6.93055e+07 7.97859e+06 22193 3.41566e+07 0 0.149603 0.991805 0.814386 6.87376e+07 0.00299695 1.49721e+07 9.17453e+06 1.49271e+07 159 1.49605e+07 1.20515e+07 0.00269744 1.51592e+07 50.3299 0.00560004 0.995037 0 49.9247 GTEX-XAJ8-0826-SM-47JY6 0 B1 6 pieces ~8x3mm; squamous epithelium is ~1.5-2% of thickness 8 Skin Skin - Sun Exposed (Lower leg) 0004264 168 1093 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987891 404676 0.970237 0.99108 0.822113 23244 1 76 0.00247533 210 0 7.61882e+07 0.0295294 546658 7.6874e+07 8.37209e+06 23270 3.78579e+07 0 0.148124 0.99108 0.81478 7.61882e+07 0.00312445 1.65476e+07 1.09895e+07 1.65546e+07 188 1.66091e+07 1.34678e+07 0.00279885 1.6734e+07 50.1873 0.00711109 0.994269 0 50.0105 GTEX-XAJ8-0926-SM-47JXZ 0 B1 2 pieces ~10x6mm, fibrous bands noted 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 178 1083 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989537 325908 0.973135 0.992296 0.807503 22673 1 76 0.00244732 137 0 6.97189e+07 0.0265742 368919 7.02602e+07 7.49991e+06 22701 3.46638e+07 0 0.165632 0.992296 0.801282 6.97189e+07 0.0029224 1.53403e+07 7.88441e+06 1.5313e+07 162 1.53624e+07 1.19061e+07 0.0026842 1.54808e+07 50.1918 0.00525075 0.995055 0 49.9554 GTEX-XAJ8-1026-SM-47JY9 0 B1 2 pieces ~8x8mm, only trace interstitial fat 5.8 Muscle Muscle - Skeletal 0011907 182 1080 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987751 456690 0.981612 0.991752 0.878728 20126 1 76 0.00239783 205 0 8.49239e+07 0.0182014 1.74869e+06 8.56301e+07 9.81229e+06 20134 4.21819e+07 0 0.102884 0.991752 0.87148 8.49239e+07 0.0029604 1.87181e+07 1.16062e+07 1.85918e+07 243 1.86668e+07 1.59695e+07 0.00267798 1.89505e+07 50.3772 0.0204214 0.995753 0 49.8307 GTEX-XAJ8-1126-SM-47JYA 0 B1 2 pieces ~4x3mm. Discontinuous adherent fat up to ~1mm, delineated 7.8 Nerve Nerve - Tibial 0001323 184 1078 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988125 332733 0.962519 0.990719 0.727968 23847 1 76 0.00259217 135 0 6.71639e+07 0.0372659 316677 6.7793e+07 7.50118e+06 23883 3.33849e+07 0 0.23455 0.990719 0.721212 6.71639e+07 0.00308577 1.4694e+07 8.546e+06 1.47587e+07 148 1.47916e+07 8.86759e+06 0.00283832 1.48342e+07 50.0719 0.00467123 0.993314 0 50.11 GTEX-XAJ8-1226-SM-47JYS 0 B1 2 pieces, ~1.5mm d.; discontinuous adherent fibrous tissue up to ~0.5mm 8.5 Blood Vessel Artery - Tibial 0007610 188 1075 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988628 497948 0.970692 0.99192 0.834513 21500 1 76 0.00239264 139 0 7.05942e+07 0.0288819 253015 7.11692e+07 8.18132e+06 21516 3.50716e+07 0 0.13618 0.99192 0.827769 7.05942e+07 0.00288844 1.52244e+07 8.72733e+06 1.52207e+07 161 1.52842e+07 1.35628e+07 0.00263972 1.53907e+07 50.1735 0.00355512 0.995211 0 49.9939 GTEX-XAJ8-1326-SM-47JYT 0 B1 2 pieces ~7x6mm, spermatogenesis is present; remarkably well preserved 7.3 Testis Testis 0000473 193 1070 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.984951 553448 0.909859 0.988234 0.68331 32103 1 76 0.00263035 129 0 6.18162e+07 0.0898257 608619 6.25522e+07 6.81242e+06 32154 3.07091e+07 0 0.226549 0.988234 0.675271 6.18162e+07 0.00321875 1.25861e+07 1.61377e+07 1.25331e+07 120 1.26226e+07 8.92657e+06 0.00292357 1.26916e+07 50.1363 0.00972978 0.991517 0 49.8945 GTEX-XAJ8-1426-SM-47JYM 0 B1 6 pieces up to ~9x4.5mm; squamous epithelium is is ~1% of thickness 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 213 1051 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988586 348779 0.967735 0.991555 0.793169 23178 1 76 0.00245415 179 0 7.43313e+07 0.0320731 416314 7.49644e+07 7.99375e+06 23196 3.69513e+07 0 0.174566 0.991555 0.78647 7.43313e+07 0.0029655 1.63365e+07 1.05899e+07 1.63314e+07 181 1.63738e+07 1.15251e+07 0.00270906 1.65121e+07 50.2102 0.00555349 0.994524 0 49.9921 GTEX-XBEC-0002-SM-4YUVW_1 C1 Blood Whole Blood 0013756 329 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-XBEC-0002-SM-53IUU C1 Blood Whole Blood 0013756 329 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XBEC-0002-SM-5SOEV C1 Blood Whole Blood 0013756 329 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-5434 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XBEC-0006-SM-4AT5T C1 8.2 Blood Whole Blood 0013756 329 BP-30669 RNA isolation_PAXgene Blood RNA (Manual) 09/05/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.977798 490251 0.97086 0.980399 0.784521 17808 1 76 0.0019691 88 0 6.30021e+07 0.0266501 136041 6.42617e+07 5.70831e+06 17812 3.12329e+07 0 0.186339 0.980399 0.769143 6.30021e+07 0.00342957 1.46675e+07 8.96871e+07 1.47607e+07 110 1.47699e+07 1.57914e+07 0.0026974 1.48459e+07 50.1283 0.00211698 0.983 0 50.1584 GTEX-XBEC-0008-SM-4AT3X C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 424 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991203 436496 0.976516 0.993241 0.850265 20348 1 76 0.00165216 147 0 6.99119e+07 0.0231431 272729 7.03876e+07 6.3234e+06 20360 3.48087e+07 0 0.12625 0.993241 0.844518 6.99119e+07 0.00235995 1.56365e+07 9.78194e+06 1.57135e+07 148 1.57758e+07 1.75938e+07 0.00200533 1.57186e+07 49.9092 0.00387467 0.995279 0 50.1228 GTEX-XBEC-0126-SM-4GIDT 2 C1 2 pieces 7x6 & 9x6mm; spermatogenesis present, poorly preserved 6.8 Testis Testis 0000473 420 1100 BP-31713 RNA isolation_PAXgene Tissue miRNA 10/02/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987662 440921 0.923307 0.990637 0.713604 33184 1 76 0.00243657 155 0 8.1071e+07 0.0763752 602405 8.18373e+07 8.17458e+06 33251 4.03213e+07 0 0.209703 0.990637 0.706923 8.1071e+07 0.00353345 1.67617e+07 1.20013e+07 1.67901e+07 161 1.68937e+07 1.28719e+07 0.00298336 1.68766e+07 49.9746 0.00736101 0.993612 0 50.0423 GTEX-XBEC-0326-SM-4AT4M 1 C1 2 pieces 9x7 & 8.5x7mm; 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 426 1097 BP-31713 RNA isolation_PAXgene Tissue miRNA 10/02/2012 LCSET-3137,LCSET-3309 06/09/2013 TruSeq.v1 RNASEQ 0.98738 491169 0.965492 0.990233 0.802217 21822 1 76 0.00202293 128 0 5.51346e+07 0.0342216 196521 5.56784e+07 3.80706e+06 21839 2.73953e+07 0 0.163275 0.990233 0.794382 5.51346e+07 0.00287849 1.19721e+07 9.32879e+06 1.20959e+07 136 1.21339e+07 9.43148e+06 0.00244948 1.20933e+07 49.9161 0.00352957 0.993086 0 50.2571 GTEX-XBEC-0426-SM-4QART 1 C1 2 pieces 5x4 & 6x4.5mm; good clean specimens 7.6 Nerve Nerve - Tibial 0001323 471 1052 BP-36136 RNA isolation_PAXgene Tissue miRNA 02/14/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989585 595894 0.962761 0.99187 0.736617 24123 1 76 0.00207409 164 0 7.55877e+07 0.0369448 178648 7.62073e+07 3.87439e+06 24160 3.75714e+07 0 0.226144 0.99187 0.730628 7.55877e+07 0.00285089 1.65167e+07 8.33902e+06 1.66201e+07 173 1.66533e+07 1.11653e+07 0.00246159 1.66588e+07 50.0082 0.00234424 0.994154 0 50.156 GTEX-XBEC-0526-SM-4QARU 1 C1 2 pieces 3x3 & 3x3mm; good clean specimens 7.5 Blood Vessel Artery - Tibial 0007610 472 1052 BP-36136 RNA isolation_PAXgene Tissue miRNA 02/14/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990392 553733 0.970707 0.992421 0.804556 21777 1 76 0.00195321 152 0 7.1503e+07 0.0289575 216000 7.2049e+07 3.723e+06 21799 3.55456e+07 0 0.166151 0.992421 0.798458 7.1503e+07 0.00273751 1.53056e+07 6.94404e+06 1.53898e+07 171 1.53958e+07 1.25059e+07 0.00234456 1.54491e+07 50.0864 0.00299796 0.994449 0 50.1372 GTEX-XBEC-0626-SM-4QARY 1 C1 2 pieces 9.5x6 & 10x9mm; less than ~5% interstitial fat, rep area delineated 7.2 Muscle Muscle - Skeletal 0011907 477 1048 BP-36259 RNA isolation_PAXgene Tissue miRNA 02/20/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990567 593745 0.980675 0.992596 0.877845 19392 1 76 0.00164157 198 0 8.1912e+07 0.0191404 683351 8.25229e+07 4.13086e+06 19403 4.07583e+07 0 0.10283 0.992596 0.871346 8.1912e+07 0.00247334 1.78308e+07 1.04375e+07 1.79077e+07 225 1.78439e+07 1.51331e+07 0.0020566 1.80577e+07 50.2978 0.00828074 0.994626 0 50.1076 GTEX-XBEC-0726-SM-4QARZ 0 C1 6 pieces, up to 10x6mm; squamous epithelium is ~1% thickness 5.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 497 1028 BP-36259 RNA isolation_PAXgene Tissue miRNA 02/20/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.987198 394118 0.967291 0.989942 0.762391 23327 1 76 0.00206889 151 0 6.13384e+07 0.032531 399146 6.19616e+07 3.32406e+06 23345 3.04727e+07 0 0.2049 0.989942 0.754723 6.13384e+07 0.00292975 1.33944e+07 8.7451e+06 1.35323e+07 153 1.35388e+07 8.48347e+06 0.00249813 1.35597e+07 50.0385 0.00644182 0.992685 0 50.2562 GTEX-XBEC-1026-SM-4QASM 2 C1 2 pieces 8x7 & 7x6mm; moderate congestion/atalectasis 7.1 Lung Lung 0008952 525 1002 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988202 475321 0.968821 0.990525 0.748282 22949 1 76 0.0023125 139 0 6.52099e+07 0.0308711 220108 6.58337e+07 3.47915e+06 22981 3.23844e+07 0 0.220539 0.990525 0.741192 6.52099e+07 0.00305703 1.43378e+07 7.68862e+06 1.44554e+07 153 1.44822e+07 9.1829e+06 0.00268389 1.44655e+07 49.9713 0.00334339 0.992848 0 50.2042 GTEX-XBEC-1226-SM-4AT65 1 C1 2 pieces, 8x7 & 8x8mm; 7.7 Heart Heart - Atrial Appendage 0006631 531 997 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990805 391402 0.973091 0.992848 0.799997 21519 1 76 0.00180789 126 0 6.61481e+07 0.0266153 741027 6.66246e+07 5.75118e+06 21532 3.29234e+07 0 0.173094 0.992848 0.794276 6.61481e+07 0.00257869 1.41536e+07 9.00244e+06 1.41543e+07 151 1.41843e+07 1.17441e+07 0.0021925 1.42566e+07 50.1271 0.0111224 0.994891 0 50.0014 GTEX-XBEC-1326-SM-4AT69 1 C1 2 pieces, 7x7 & 9x7mm; minimal ischemic change 6.3 Heart Heart - Left Ventricle 0006566 532 997 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989452 238401 0.983191 0.991609 0.861728 19177 1 76 0.00170509 365 0 7.04541e+07 0.0167447 4.41054e+06 7.10502e+07 6.3275e+06 19179 3.50629e+07 0 0.121463 0.991609 0.854498 7.04541e+07 0.00255077 1.57666e+07 2.20412e+07 1.55308e+07 335 1.5521e+07 2.86948e+06 0.00212701 1.59214e+07 50.6368 0.0620764 0.993766 0 49.6234 GTEX-XBEC-1526-SM-4AT68 2 C1 2 pieces, 9x7 & 8x8mm; 70-80% macrovesicular steatosis with patchy bridging fibrosis 6.3 Liver Liver 0001114 536 996 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.985765 524125 0.951299 0.987978 0.783539 20987 1 76 0.00200481 121 0 5.8953e+07 0.0485099 1.16928e+06 5.96704e+07 5.10273e+06 21003 2.93203e+07 0 0.16776 0.987978 0.774119 5.8953e+07 0.00288233 1.27613e+07 2.06539e+07 1.27471e+07 162 1.27298e+07 5.89736e+06 0.00244259 1.29124e+07 50.356 0.0195957 0.990191 0 49.9721 GTEX-XBEC-1826-SM-4QASN 1 C1 2 pieces, 11x9 & 7x6.5mm; 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 542 992 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.98921 462272 0.974145 0.991222 0.79546 22872 1 76 0.00204008 146 0 6.53152e+07 0.0255349 193163 6.58936e+07 3.31301e+06 22891 3.24822e+07 0 0.178685 0.991222 0.788477 6.53152e+07 0.00281192 1.43732e+07 7.71081e+06 1.44591e+07 155 1.44808e+07 1.12996e+07 0.00242522 1.44855e+07 50.0081 0.00293144 0.993234 0 50.149 GTEX-XBED-0003-SM-47JWP B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -116 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988607 695308 0.971068 0.991912 0.817476 21477 1 76 0.00244127 170 0 8.43512e+07 0.0286174 512160 8.50389e+07 1.00644e+07 21504 4.19164e+07 0 0.153592 0.991912 0.810864 8.43512e+07 0.00285195 1.88536e+07 1.21808e+07 1.87897e+07 172 1.89274e+07 2.03196e+07 0.00264592 1.89904e+07 50.0831 0.00602265 0.995218 0 49.9152 GTEX-XBED-0004-SM-3PYKD B1 Blood Whole Blood 0013756 -116 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 GTEx_batch9_EX_001 11/21/2012 Illumina Human Exome SNP Array EXCLUDE 8332763067_R03C01 GTEX-XBED-0004-SM-3PZ7G B1 Blood Whole Blood 0013756 -116 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 GTEx_batch9_OM5_001 11/21/2012 Illumina OMNI SNP Array OMNI 8976340005_R03C01 GTEX-XBED-0004-SM-3USR4 B1 Blood Whole Blood 0013756 -116 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-2654 01/20/2013 Exome Express (Agilent SureSelect) EXCLUDE GTEX-XBED-0004-SM-58Q93 B1 Blood Whole Blood 0013756 -116 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XBED-0004-SM-5URD9 B1 Blood Whole Blood 0013756 -116 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-5270,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XBED-0006-SM-47JXO B1 8.5 Blood Whole Blood 0013756 -116 BP-30669 RNA isolation_PAXgene Blood RNA (Manual) 09/05/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.983182 736365 0.958719 0.987622 0.793902 18649 1 76 0.00235194 105 0 7.05259e+07 0.0404605 197010 7.14098e+07 7.94256e+06 18656 3.49886e+07 0 0.164817 0.987622 0.784075 7.05259e+07 0.00335188 1.56317e+07 6.7011e+07 1.58139e+07 130 1.59074e+07 1.56534e+07 0.00284966 1.58716e+07 49.9436 0.00275887 0.992062 0 50.2896 GTEX-XBED-0008-SM-47JWO B1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 173 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.991056 581054 0.97251 0.993467 0.833467 21370 1 76 0.00221482 182 0 7.64541e+07 0.0270971 173899 7.69569e+07 8.30145e+06 21393 3.80302e+07 0 0.139043 0.993467 0.828022 7.64541e+07 0.00253894 1.70044e+07 8.62279e+06 1.69845e+07 182 1.70917e+07 1.61774e+07 0.00237649 1.70719e+07 49.9709 0.00225969 0.995878 0 49.9707 GTEX-XBED-0126-SM-47JY7 1 B1 2 pieces, 9.5x9 & 9x8mm; 10% peripheral adipose 8.3 Thyroid Thyroid 0002046 94 495 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987577 444247 0.961896 0.991069 0.736694 23810 1 76 0.00240186 128 0 6.75292e+07 0.0378356 278202 6.81377e+07 7.77222e+06 23846 3.35396e+07 0 0.225202 0.991069 0.730115 6.75292e+07 0.00289502 1.46928e+07 8.80599e+06 1.47124e+07 143 1.47981e+07 1.05185e+07 0.00264757 1.48376e+07 50.0666 0.00408294 0.994561 0 50.0334 GTEX-XBED-0226-SM-47JY8 1 B1 2 pieces, 12.5x10 & 14x13mm; Scattered eosinophilic foci in exocrine and endocrine tissue, some having infarcted centers and fibrin thrombi in capillaries. 7.2 Pancreas Pancreas 0001150 97 492 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988924 367521 0.971394 0.991962 0.824518 21904 1 76 0.00255223 118 0 7.5379e+07 0.0284097 172787 7.59898e+07 8.00226e+06 21921 3.74716e+07 0 0.146876 0.991962 0.81789 7.5379e+07 0.00317773 1.72033e+07 1.58043e+07 1.71644e+07 130 1.72228e+07 1.99432e+07 0.00286402 1.73817e+07 50.2296 0.00227382 0.995001 0 49.9435 GTEX-XBED-0526-SM-47JY3 1 B1 2 pieces, 11x10 & 10x9mm; Enlarged nuclei c/w hypertension. !x7mm adipose on edge of 1 piece. 7.8 Heart Heart - Left Ventricle 0006566 104 485 BP-31549 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.98573 374134 0.97978 0.988289 0.870109 19465 1 76 0.00220905 148 0 6.26913e+07 0.019947 1.3545e+06 6.34341e+07 6.99261e+06 19473 3.11811e+07 0 0.109671 0.988289 0.859919 6.26913e+07 0.00261947 1.3957e+07 1.20497e+07 1.37885e+07 171 1.37378e+07 1.04015e+07 0.00241373 1.41528e+07 50.744 0.0213528 0.990848 0 49.6963 GTEX-XBED-0726-SM-4GIAR 1 B1 6 pieces, up to 11x5mm; Prominent sclerotic plaques in 3/6. 7.5 Blood Vessel Artery - Aorta 0001496 111 478 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.988027 704877 0.967349 0.990907 0.814293 22077 1 76 0.00228295 153 0 7.28142e+07 0.0321936 120171 7.34824e+07 7.33676e+06 22099 3.61874e+07 0 0.153056 0.990907 0.806889 7.28142e+07 0.00362804 1.57972e+07 1.17853e+07 1.58223e+07 165 1.58756e+07 1.34925e+07 0.00295354 1.5966e+07 50.1419 0.00163537 0.993788 0 50.0397 GTEX-XBED-0826-SM-47JYC 1 B1 2 pieces, 10x6 & 12x9mm; Moderate numbers of heart failure cells 8.9 Lung Lung 0008952 112 477 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988904 528353 0.970419 0.991799 0.802327 22426 1 76 0.00236969 122 0 5.97375e+07 0.029265 194868 6.02315e+07 6.54985e+06 22446 2.9692e+07 0 0.168092 0.991799 0.795747 5.97375e+07 0.00298109 1.32791e+07 8.7415e+06 1.32734e+07 133 1.33348e+07 1.13144e+07 0.00267449 1.33983e+07 50.1186 0.00323532 0.994695 0 49.9892 GTEX-XBED-0926-SM-48TCE 1 B1 6 pieces, up to 11x5mm; Well trimmed muscularis. 8.5 Esophagus Esophagus - Muscularis 0004648 120 469 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.992058 364099 0.972964 0.994074 0.831787 22006 1 76 0.00151418 169 0 7.39515e+07 0.0267664 525528 7.43923e+07 3.87044e+06 22030 3.6825e+07 0 0.141177 0.994074 0.826858 7.39515e+07 0.0022471 1.60738e+07 8.58919e+06 1.6129e+07 200 1.61535e+07 1.31004e+07 0.00187989 1.61938e+07 50.0623 0.00706428 0.996091 0 50.0858 GTEX-XBED-1026-SM-48TCB 1 B1 6 pieces, up to 12x3mm; Chronic inflammation and squamous hyperplasia. Abundant submucosal glands in the 2 largest pieces 9.1 Esophagus Esophagus - Mucosa 0006920 123 466 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.990907 448411 0.974789 0.993034 0.827034 22423 1 76 0.00164521 166 0 7.41629e+07 0.0247832 265754 7.46831e+07 3.79862e+06 22441 3.69165e+07 0 0.147755 0.993034 0.821273 7.41629e+07 0.00229714 1.66777e+07 1.18462e+07 1.67487e+07 170 1.68185e+07 1.56063e+07 0.00197048 1.6766e+07 49.9219 0.00355842 0.995162 0 50.1062 GTEX-XBED-1126-SM-48TCF 1 B1 6 pieces, up to 12x5mm; Up to 1x3mm adipose on 2 pieces 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 129 460 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3085 04/12/2013 TruSeq.v1 RNASEQ 0.991074 298153 0.971024 0.993083 0.811765 21426 1 76 0.00156923 122 0 5.32006e+07 0.0287204 330895 5.35712e+07 2.63415e+06 21444 2.64797e+07 0 0.159259 0.993083 0.806149 5.32006e+07 0.00223773 1.15781e+07 6.22151e+06 1.1641e+07 133 1.16641e+07 8.92058e+06 0.0019028 1.16613e+07 49.994 0.00617674 0.995091 0 50.1354 GTEX-XBED-1226-SM-4AT5V 1 B1 6 pieces, up to 12x4mm; Well preserved mucosa in all. Muscularis in 4/6. 7 Stomach Stomach 0000945 131 458 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.986391 265101 0.977754 0.988605 0.838542 21990 1 76 0.00176999 226 0 6.88262e+07 0.021787 1.29258e+06 6.96196e+07 6.017e+06 22012 3.42358e+07 0 0.139212 0.988605 0.828986 6.88262e+07 0.00262214 1.56692e+07 5.01643e+07 1.58807e+07 184 1.59187e+07 1.57217e+07 0.00219511 1.57839e+07 49.7873 0.0185663 0.990818 0 50.3352 GTEX-XBED-1326-SM-4AT4F 0 B1 2 pieces, 12x8 & 11.5x11.5mm; No artifacts. 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 134 455 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991042 265177 0.977979 0.99326 0.861222 21245 1 76 0.00172339 160 0 6.70113e+07 0.0217447 713915 6.74661e+07 6.0299e+06 21257 3.33646e+07 0 0.116757 0.99326 0.855417 6.70113e+07 0.00245606 1.48125e+07 7.23594e+06 1.49576e+07 180 1.49688e+07 1.18974e+07 0.00208891 1.49453e+07 49.9607 0.0105818 0.995478 0 50.2437 GTEX-XBED-1426-SM-4AT4G 1 B1 6 pieces, up to 13x4mm; 5 of 6 pieces contain both mucosa and muscularis. Lymphoid tissue annotated on image. 8 Small Intestine Small Intestine - Terminal Ileum 0001211 138 451 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.9892 384787 0.968499 0.991233 0.779533 23727 1 76 0.00213976 165 0 7.25553e+07 0.0309026 509683 7.3197e+07 6.14856e+06 23759 3.61032e+07 0 0.188966 0.991233 0.7727 7.25553e+07 0.00282852 1.60847e+07 1.03845e+07 1.61562e+07 170 1.61865e+07 1.15457e+07 0.00248343 1.61958e+07 50.0144 0.00696317 0.993267 0 50.1108 GTEX-XBED-1526-SM-4AT5W 1 B1 6 pieces, up to 11x4mm; Mucosa varies from mild to moderate autolysis. All pieces are well sampled: mucosa and muscularis. 8.6 Colon Colon - Transverse 0001157 142 447 BP-31651 RNA isolation_PAXgene Tissue miRNA 10/01/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98767 556553 0.963124 0.99 0.801494 22676 1 76 0.00236499 136 0 6.1546e+07 0.034983 679493 6.21676e+07 5.23824e+06 22699 3.05625e+07 0 0.16163 0.99 0.793479 6.1546e+07 0.00323665 1.36073e+07 1.47798e+07 1.35868e+07 147 1.36133e+07 9.88256e+06 0.0027998 1.37301e+07 50.2136 0.01093 0.992331 0 49.9624 GTEX-XBED-1626-SM-47JYN 1 B1 2 pieces, 9x7 & 11x9mm; 1 piece is fibroadipose with mammary ducts, mild gynecomastia; other piece is all adipose 8 Breast Breast - Mammary Tissue 0008367 145 444 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986775 477648 0.966875 0.990874 0.779087 24472 1 76 0.0024126 168 0 7.83869e+07 0.0327786 173987 7.91088e+07 9.25575e+06 24508 3.89194e+07 0 0.187788 0.990874 0.771978 7.83869e+07 0.00293248 1.71534e+07 1.00199e+07 1.72179e+07 177 1.73334e+07 1.3757e+07 0.00267147 1.73539e+07 50.0295 0.00219934 0.994973 0 50.0937 GTEX-XBED-1726-SM-47JYO 1 B1 6 pieces, up to 10x4mm; All pieces have mucosa and variable amounts of submucosal adipose. The sigmoid colon target is muscle only 8.2 Colon Colon - Sigmoid 0001159 152 437 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989593 396894 0.974248 0.992245 0.825096 22870 1 76 0.00228831 168 0 7.40937e+07 0.025247 536399 7.46728e+07 7.98223e+06 22887 3.68426e+07 0 0.149152 0.992245 0.818698 7.40937e+07 0.00266931 1.61504e+07 8.96328e+06 1.61361e+07 181 1.61604e+07 1.31651e+07 0.0024783 1.63164e+07 50.2401 0.00718332 0.994897 0 49.978 GTEX-XBED-1926-SM-47JYP 1 B1 6 pieces, up to 11x3.5mm; Well trimmed of subcutaneous adipose 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 164 425 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987392 327375 0.973234 0.990933 0.828154 22822 1 76 0.00230136 185 0 7.0088e+07 0.0265296 635967 7.07294e+07 7.96069e+06 22844 3.48234e+07 0 0.14508 0.990933 0.820645 7.0088e+07 0.00299935 1.54198e+07 1.03807e+07 1.53877e+07 169 1.54557e+07 1.27945e+07 0.00264911 1.5603e+07 50.2372 0.00899156 0.994473 0 49.9479 GTEX-XBED-2026-SM-4AT5D 1 B1 2 pieces, 12x8 & 15x9mm; Larger piece shows reduced spermatogenesis 7.6 Testis Testis 0000473 166 423 BP-31713 RNA isolation_PAXgene Tissue miRNA 10/02/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990022 539520 0.923676 0.991955 0.727954 31940 1 76 0.00191567 128 0 6.64962e+07 0.0759924 518280 6.70355e+07 5.6773e+06 31992 3.30999e+07 0 0.195722 0.991955 0.722097 6.64962e+07 0.00265231 1.38744e+07 1.61104e+07 1.39446e+07 134 1.40064e+07 1.14287e+07 0.00228327 1.39343e+07 49.8709 0.00773143 0.993888 0 50.1261 GTEX-XBED-2226-SM-47JYQ 1 B1 6 pieces, up to 6.5x3mm; Well trimmed of subcutaneous adipose 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 211 378 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.986693 457244 0.96598 0.989971 0.789538 23004 1 76 0.00242031 159 0 6.25142e+07 0.0337944 368521 6.31475e+07 6.83022e+06 23027 3.10566e+07 0 0.176442 0.989971 0.78162 6.25142e+07 0.00300803 1.3624e+07 1.06749e+07 1.36097e+07 146 1.36694e+07 1.07771e+07 0.0027132 1.37729e+07 50.1887 0.00583587 0.993249 0 49.9738 GTEX-XBED-2326-SM-47JYR 1 B1 2 pieces, 7x6 & 14x9mm; Larger piece is adipose tissue, smaller piece is skin 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 212 377 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987901 387469 0.97539 0.991247 0.841864 21801 1 76 0.00231258 159 0 6.84983e+07 0.0243245 357446 6.91031e+07 7.82089e+06 21817 3.4034e+07 0 0.133526 0.991247 0.834495 6.84983e+07 0.00287356 1.515e+07 8.05771e+06 1.51307e+07 172 1.519e+07 1.21519e+07 0.00259212 1.53198e+07 50.2128 0.00517265 0.994593 0 49.9681 GTEX-XBED-2426-SM-4AT4O 1 B1 2 pieces, 4x4 & 4x4mm; No lesions. Up to 1 mm concentric adventitial fibrous tissue 8 Blood Vessel Artery - Tibial 0007610 217 372 BP-31585 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988912 334936 0.971094 0.991127 0.82511 20827 1 76 0.00184048 120 0 5.44037e+07 0.0286095 159909 5.48907e+07 4.51704e+06 20838 2.70692e+07 0 0.145984 0.991127 0.817789 5.44037e+07 0.00271945 1.17284e+07 6.28337e+06 1.17894e+07 132 1.18018e+07 1.00809e+07 0.00227898 1.18391e+07 50.079 0.00291322 0.993341 0 50.1298 GTEX-XBED-2526-SM-47JYD 1 B1 2 pieces, 4x3.5 & 6x4mm; ~10% adipose in and around each 7.7 Nerve Nerve - Tibial 0001323 219 370 BP-31551 RNA isolation_PAXgene Tissue miRNA 09/27/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989346 375864 0.960281 0.991851 0.720844 23210 1 76 0.00245046 124 0 5.79823e+07 0.0394856 188580 5.84587e+07 6.23329e+06 23244 2.88325e+07 0 0.239438 0.991851 0.714969 5.79823e+07 0.00289772 1.26593e+07 8.05597e+06 1.26958e+07 126 1.27342e+07 8.56264e+06 0.00267352 1.2769e+07 50.0681 0.00322587 0.994355 0 50.0721 GTEX-XBED-2626-SM-4E3J5 1 B1 2 pieces, 10x8 & 14.5x10.5mm; 2.5x1 mm tendon in small piece along with 10% internal adipose 8.7 Muscle Muscle - Skeletal 0011907 222 367 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989432 622341 0.978986 0.992216 0.88297 18912 1 76 0.0022743 160 0 7.78618e+07 0.0207952 871718 7.84726e+07 8.4439e+06 18921 3.87209e+07 0 0.0960166 0.992216 0.876097 7.78618e+07 0.00358508 1.69358e+07 1.25733e+07 1.70232e+07 196 1.7046e+07 1.47914e+07 0.00292785 1.71228e+07 50.1123 0.0111086 0.995 0 50.1287 GTEX-XBEW-0001-SM-4YUVV C1 Blood Whole Blood 0013756 338 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XBEW-0001-SM-53IUT C1 Blood Whole Blood 0013756 338 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XBEW-0001-SM-7DLG7 C1 Blood Whole Blood 0013756 338 BP-30526 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/04/2012 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XBEW-0002-SM-4AT5O C1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 338 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990699 480463 0.965584 0.992628 0.804742 20391 1 76 0.00208341 135 0 6.48354e+07 0.0339675 397966 6.53169e+07 5.71155e+06 20412 3.22722e+07 0 0.160842 0.992628 0.798809 6.48354e+07 0.00276327 1.43301e+07 1.09499e+07 1.44016e+07 136 1.44732e+07 1.47199e+07 0.00242268 1.43819e+07 49.8417 0.00609285 0.994556 0 50.1245 GTEX-XBEW-0006-SM-4AT4E C1 8.3 Blood Whole Blood 0013756 338 BP-30669 RNA isolation_PAXgene Blood RNA (Manual) 09/05/2012 LCSET-3137,LCSET-3309 06/09/2013 TruSeq.v1 RNASEQ 0.961687 3.74472e+06 0.890411 0.964835 0.731524 21409 1 76 0.00208729 379 0 1.49487e+08 0.108414 1.21135e+06 1.54935e+08 1.20319e+07 21425 7.42186e+07 0 0.158888 0.964835 0.7058 1.49487e+08 0.00329717 3.02512e+07 2.18053e+08 3.12022e+07 342 3.11684e+07 2.38546e+07 0.00269026 3.08556e+07 49.7479 0.00781842 0.967983 0 50.7738 GTEX-XBEW-0008-SM-4AT3Y C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 440 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991892 486575 0.974841 0.993858 0.843354 20550 1 76 0.00171923 148 0 6.29661e+07 0.0247801 184555 6.33552e+07 5.33496e+06 20567 3.13407e+07 0 0.131488 0.993858 0.838173 6.29661e+07 0.00250975 1.40004e+07 7.48429e+06 1.41144e+07 139 1.41728e+07 1.45818e+07 0.00211371 1.40651e+07 49.8093 0.00291302 0.995823 0 50.2027 GTEX-XBEW-0126-SM-4AT66 1 C1 2 pieces, 9x6 & 7x5mm; nodular goitre with fibrous bands noted 6.6 Thyroid Thyroid 0002046 426 1420 BP-31713 RNA isolation_PAXgene Tissue miRNA 10/02/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988156 369850 0.961255 0.99036 0.711768 23128 1 76 0.00211076 113 0 5.79749e+07 0.0385282 166682 5.85392e+07 5.27466e+06 23162 2.8839e+07 0 0.249487 0.99036 0.704906 5.79749e+07 0.00289753 1.26054e+07 7.67743e+06 1.26914e+07 126 1.27112e+07 7.79481e+06 0.00250327 1.27112e+07 50.0001 0.00284736 0.992564 0 50.1702 GTEX-XBEW-0226-SM-4AT6A 1 C1 2 pieces, 8x7 & 10x6mm; patchy emphysematous changes, bronchiolar metaplasia noted 7.7 Lung Lung 0008952 429 1417 BP-31713 RNA isolation_PAXgene Tissue miRNA 10/02/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98925 349644 0.961391 0.991598 0.766119 24778 1 76 0.0021202 141 0 6.70362e+07 0.0382286 328895 6.76042e+07 6.17188e+06 24819 3.33407e+07 0 0.195272 0.991598 0.759682 6.70362e+07 0.00296038 1.45959e+07 7.62629e+06 1.46806e+07 153 1.46789e+07 1.06814e+07 0.00253929 1.47503e+07 50.1213 0.00486501 0.993944 0 50.1446 GTEX-XBEW-0526-SM-4QASO 1 C1 6 pieces, up to 8x2mm; 8.3 Blood Vessel Artery - Aorta 0001496 437 1411 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990843 564964 0.96821 0.992647 0.802294 21300 1 76 0.00195544 129 0 5.71671e+07 0.0314344 152725 5.75906e+07 2.89608e+06 21317 2.84168e+07 0 0.165916 0.992647 0.796395 5.71671e+07 0.00273265 1.22829e+07 5.77151e+06 1.23587e+07 142 1.23471e+07 9.76819e+06 0.00234334 1.24021e+07 50.1111 0.00265191 0.99445 0 50.1539 GTEX-XBEW-0626-SM-4QASP 0 C1 6 pieces, up to 8x3.5mm; squamous epithelium is ~2% thickness 8.9 Skin Skin - Sun Exposed (Lower leg) 0004264 439 1409 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988573 431216 0.971358 0.991018 0.828495 21575 1 76 0.00204506 188 0 6.32496e+07 0.0284359 283047 6.38228e+07 3.44472e+06 21592 3.1446e+07 0 0.142862 0.991018 0.821054 6.32496e+07 0.00281931 1.3628e+07 1.0072e+07 1.37103e+07 157 1.3734e+07 1.14934e+07 0.00243123 1.37647e+07 50.0558 0.00443489 0.993462 0 50.1506 GTEX-XBEW-0726-SM-4QARX 0 C1 2 pieces, 11x9 & 8x6mm; 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 441 1409 BP-36391 RNA isolation_PAXgene Tissue miRNA 02/22/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990548 489369 0.975943 0.992614 0.837277 22102 1 76 0.00201013 172 0 7.51929e+07 0.0237827 402031 7.57524e+07 3.99127e+06 22117 3.7404e+07 0 0.138666 0.992614 0.831093 7.51929e+07 0.00278291 1.65056e+07 8.2211e+06 1.66618e+07 196 1.66359e+07 1.30726e+07 0.00239572 1.66893e+07 50.0801 0.00530717 0.994679 0 50.2354 GTEX-XBEW-0826-SM-4QASQ 0 C1 2 pieces, 3x1 & 2.5x2mm; good clean specimen, 7.4 Blood Vessel Artery - Tibial 0007610 444 1407 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988971 596540 0.966915 0.99129 0.790978 20394 1 76 0.00208167 142 0 6.38513e+07 0.0327618 322452 6.44123e+07 3.48832e+06 20415 3.17226e+07 0 0.175937 0.99129 0.784089 6.38513e+07 0.00288931 1.36115e+07 6.13291e+06 1.37187e+07 154 1.37026e+07 9.9344e+06 0.00248455 1.37774e+07 50.1361 0.00500606 0.99361 0 50.1961 GTEX-XBEW-0926-SM-4QASR 0 C1 2 pieces, 6x2.5 & 5x3mm; good clean specimen, minimal (<0.1mm) adherent fat on one aliquot 6.6 Nerve Nerve - Tibial 0001323 445 1407 BP-36349 RNA isolation_PAXgene Tissue miRNA 02/21/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.989172 574039 0.959939 0.991445 0.721909 23819 1 76 0.0021396 139 0 6.50309e+07 0.0398242 222184 6.55921e+07 3.4404e+06 23857 3.23066e+07 0 0.23803 0.991445 0.715733 6.50309e+07 0.00296477 1.41718e+07 8.39757e+06 1.42751e+07 151 1.42861e+07 8.74286e+06 0.00255124 1.43152e+07 50.0509 0.00338736 0.993718 0 50.1817 GTEX-XBEW-1026-SM-4QARV 0 C1 2 pieces, 11x10 & 11x7mm; ~50-10% interstitial fat, rep. foci delineated 8.3 Muscle Muscle - Skeletal 0011907 447 1405 BP-36391 RNA isolation_PAXgene Tissue miRNA 02/22/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.990758 916606 0.979407 0.993344 0.871645 21183 1 76 0.00185765 377 0 1.33218e+08 0.0203558 1.56218e+06 1.3411e+08 7.22468e+06 21198 6.62643e+07 0 0.107762 0.993344 0.865843 1.33218e+08 0.00268343 2.92718e+07 1.58684e+07 2.97009e+07 379 2.97895e+07 2.57284e+07 0.00226946 2.95001e+07 49.7559 0.0116485 0.995931 0 50.3639 GTEX-XBEW-1126-SM-4QARW 0 C1 6 pieces, up to 8x5mm; squamous epithelium is ~1% thickness 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 449 1404 BP-36391 RNA isolation_PAXgene Tissue miRNA 02/22/2013 LCSET-3737 08/30/2013 TruSeq.v1 RNASEQ 0.988553 460899 0.968949 0.990993 0.80002 22031 1 76 0.00215 158 0 6.70151e+07 0.0308943 452511 6.76242e+07 3.55248e+06 22050 3.33015e+07 0 0.168929 0.990993 0.792814 6.70151e+07 0.00302954 1.47313e+07 9.78931e+06 1.48521e+07 170 1.48241e+07 9.98831e+06 0.00258869 1.49309e+07 50.1794 0.00669156 0.993433 0 50.2043 GTEX-XBEW-1326-SM-4AT63 1 C1 6 pieces, up to 8x3mm; squamous mucosa well preserved, up to ~10-25% thickness 9.3 Esophagus Esophagus - Mucosa 0006920 453 1403 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990159 319484 0.973037 0.992422 0.813502 21265 1 76 0.00214663 123 0 5.99716e+07 0.0267467 341147 6.04295e+07 5.32143e+06 21281 2.98488e+07 0 0.159535 0.992422 0.807337 5.99716e+07 0.00312881 1.33776e+07 9.25272e+06 1.34854e+07 136 1.35092e+07 1.14174e+07 0.0026366 1.34876e+07 49.9599 0.00564537 0.994684 0 50.2007 GTEX-XBEW-1426-SM-4AT4J 1 C1 6 pieces, up to 6x3mm; trace adherent serosal connective tissue, delineated (rep) 8 Esophagus Esophagus - Muscularis 0004648 453 1403 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989637 442366 0.967542 0.991999 0.804002 21882 1 76 0.00197135 136 0 6.52243e+07 0.0322529 530474 6.57504e+07 5.66109e+06 21899 3.24446e+07 0 0.16354 0.991999 0.797569 6.52243e+07 0.00285913 1.39388e+07 8.96844e+06 1.3997e+07 157 1.39803e+07 1.01921e+07 0.00241418 1.41071e+07 50.2259 0.008068 0.994362 0 50.1041 GTEX-XBEW-1526-SM-4AT4K 1 C1 6 pieces, up to 8x4mm; all muscularis; good specimens 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 457 1400 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988714 327279 0.968882 0.990933 0.791445 22735 1 76 0.00204541 162 0 7.58775e+07 0.0309288 718115 7.65717e+07 6.65135e+06 22764 3.77519e+07 0 0.177437 0.990933 0.784269 7.58775e+07 0.00286659 1.64574e+07 8.90661e+06 1.65075e+07 195 1.64752e+07 1.057e+07 0.00245508 1.66509e+07 50.2652 0.00937833 0.993152 0 50.0759 GTEX-XBEW-1626-SM-4SOJP 1 C1 2 pieces, 8x6 & 9x6mm; excellent preservation, one aliquot with ~1mm nubbin adherent fat, ensquared; Islets well-seen, rep ones delineated 6.9 Pancreas Pancreas 0001150 459 1399 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990487 849811 0.958262 0.993304 0.816493 20925 1 76 0.00241402 106 0 7.64084e+07 0.0415741 204854 7.69235e+07 4.34572e+06 20943 3.80122e+07 0 0.141769 0.993304 0.811025 7.64084e+07 0.00293372 1.71534e+07 3.46446e+07 1.75613e+07 115 1.75464e+07 2.13064e+07 0.00267314 1.74009e+07 49.7918 0.00266309 0.99612 0 50.5875 GTEX-XBEW-1726-SM-4RGMA 1 C1 2 pieces, 9x6 & 8x7mm; 7.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 461 1397 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990478 674114 0.970103 0.992751 0.825445 22212 1 76 0.00230437 206 0 8.12549e+07 0.0296954 978899 8.18482e+07 7.49385e+06 22226 4.04353e+07 0 0.144658 0.992751 0.819461 8.12549e+07 0.00300921 1.76041e+07 1.55867e+07 1.79457e+07 231 1.7912e+07 1.18645e+07 0.00265598 1.78221e+07 49.8742 0.0119599 0.995024 0 50.4805 GTEX-XBEW-1826-SM-4RTWX 1 C1 6 pieces, up to 9x3mm; excellent preservation; mucosa is ~30-60% of thickness 5.8 Stomach Stomach 0000945 463 1397 BP-31783 RNA isolation_PAXgene Tissue miRNA 10/04/2012 LCSET-3905 09/11/2013 TruSeq.v1 RNASEQ 0.991324 424798 0.968032 0.99312 0.80969 22938 1 76 0.00225377 184 0 6.79177e+07 0.0317848 1.05439e+06 6.83881e+07 3.53542e+06 22956 3.3801e+07 0 0.158342 0.99312 0.804119 6.79177e+07 0.00318649 1.48866e+07 2.44047e+07 1.5311e+07 179 1.52527e+07 1.08635e+07 0.00271929 1.50711e+07 49.7005 0.0154178 0.994917 0 50.7026 GTEX-XBEW-1926-SM-4SOJO 1 C1 6 pieces, up to 8x4mm; mucosa moderately preserved, ~10-20% thickness 5.7 Colon Colon - Transverse 0001157 465 1396 BP-31829 RNA isolation_PAXgene Tissue miRNA 10/05/2012 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988098 398704 0.971056 0.99159 0.810833 22828 1 76 0.00257303 158 0 6.6631e+07 0.0285829 2.00355e+06 6.71961e+07 3.83187e+06 22847 3.30947e+07 0 0.160223 0.99159 0.804014 6.6631e+07 0.0032945 1.47197e+07 1.24394e+07 1.48653e+07 194 1.47791e+07 6.66043e+06 0.0029325 1.50166e+07 50.3986 0.0298165 0.995082 0 50.246 GTEX-XGQ4-0001-SM-4YUVK_1 B1 Blood Whole Blood 0013756 -33 BP-30953 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/11/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-XGQ4-0001-SM-53IUN B1 Blood Whole Blood 0013756 -33 BP-30953 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/11/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XGQ4-0001-SM-5SOEG B1 Blood Whole Blood 0013756 -33 BP-30953 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/11/2012 LCSET-5226,LCSET-5431 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XGQ4-0004-SM-4AT5S B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -33 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989359 756943 0.960704 0.991563 0.791539 20284 1 76 0.00223441 147 0 6.60242e+07 0.0387961 596655 6.6586e+07 5.92039e+06 20306 3.28467e+07 0 0.169165 0.991563 0.78486 6.60242e+07 0.00281584 1.4543e+07 1.19606e+07 1.4644e+07 140 1.47134e+07 1.449e+07 0.00252448 1.46149e+07 49.8321 0.00896067 0.993767 0 50.173 GTEX-XGQ4-0005-SM-4AT5U B1 7.6 Blood Whole Blood 0013756 -33 BP-30967 RNA isolation_PAXgene Blood RNA (Manual) 09/11/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98424 757580 0.949253 0.986713 0.796691 16855 1 76 0.00223686 99 0 5.54125e+07 0.0496932 182859 5.61586e+07 5.15584e+06 16858 2.7528e+07 0 0.152562 0.986713 0.786105 5.54125e+07 0.00350785 1.21246e+07 5.70208e+07 1.2324e+07 112 1.23522e+07 1.22429e+07 0.00287076 1.22575e+07 49.8075 0.00325611 0.989185 0 50.4077 GTEX-XGQ4-0008-SM-4AT3Z B1 8.1 Skin Cells - Cultured fibroblasts EFO_0002009 215 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990888 577414 0.966311 0.992776 0.827316 22092 1 76 0.00174312 224 0 8.21708e+07 0.0332807 269818 8.27687e+07 6.97076e+06 22117 4.09064e+07 0 0.138996 0.992776 0.821339 8.21708e+07 0.00238517 1.81646e+07 1.22057e+07 1.82076e+07 227 1.83003e+07 1.68348e+07 0.00206353 1.82175e+07 49.8866 0.00325991 0.994665 0 50.0592 GTEX-XGQ4-0126-SM-4AT4H 1 B1 2 pieces 7x7 & 7.5x6mm; mild congestion 6.4 Spleen Spleen 0002106 137 983 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.986021 340793 0.960554 0.987756 0.775992 23726 1 76 0.00223558 149 0 6.93492e+07 0.038616 516299 7.02088e+07 5.74723e+06 23755 3.44901e+07 0 0.184562 0.987756 0.766491 6.93492e+07 0.00303655 1.52083e+07 1.11107e+07 1.52797e+07 165 1.52628e+07 1.03211e+07 0.00263536 1.53517e+07 50.1452 0.00735376 0.989491 0 50.1171 GTEX-XGQ4-0226-SM-4GIDS 1 B1 2 pieces 7x5 & 7x6mm; minimal fat, Islets well seen, rep ones delineated 7.7 Pancreas Pancreas 0001150 139 982 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.985214 512116 0.968953 0.989435 0.824403 21803 1 76 0.00247569 115 0 8.06662e+07 0.0306729 240789 8.15275e+07 8.68534e+06 21827 4.00463e+07 0 0.14455 0.989435 0.815694 8.06662e+07 0.00423381 1.83385e+07 2.28831e+07 1.84925e+07 125 1.85574e+07 2.2597e+07 0.003351 1.86234e+07 50.0887 0.00295347 0.993657 0 50.209 GTEX-XGQ4-0326-SM-4GIEE 1 B1 2 pieces 7x6 & 8x6mm; minimal ischemic changes 7.7 Heart Heart - Left Ventricle 0006566 143 979 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.989736 391031 0.982177 0.993076 0.876058 19325 1 76 0.002018 151 0 6.36368e+07 0.0175987 1.86465e+06 6.40805e+07 6.48644e+06 19332 3.1638e+07 0 0.10612 0.993076 0.869992 6.36368e+07 0.0035298 1.40057e+07 1.02269e+07 1.41335e+07 182 1.40395e+07 9.73668e+06 0.00277136 1.42834e+07 50.4305 0.0290986 0.996416 0 50.2269 GTEX-XGQ4-0426-SM-4AT4I 1 B1 2 pieces 7x6 & 7x6mm; diffuse regressive changes 7.7 Thyroid Thyroid 0002046 144 978 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989306 318945 0.965104 0.99154 0.734822 22605 1 76 0.00185667 110 0 5.42252e+07 0.0346639 212054 5.46878e+07 4.58544e+06 22635 2.6983e+07 0 0.230283 0.99154 0.728605 5.42252e+07 0.00270114 1.18761e+07 6.28045e+06 1.18983e+07 121 1.19137e+07 8.36638e+06 0.00227795 1.19794e+07 50.1375 0.00387754 0.993774 0 50.0468 GTEX-XGQ4-0526-SM-4AT6C 1 B1 2 pieces 9x4 & 7x7mm; 7.6 Heart Heart - Atrial Appendage 0006631 145 978 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.992213 285528 0.979185 0.994046 0.850909 20729 1 76 0.00159971 193 0 7.12411e+07 0.020603 1.8942e+06 7.16678e+07 6.15377e+06 20739 3.54784e+07 0 0.128276 0.994046 0.845843 7.12411e+07 0.00228849 1.54731e+07 1.23696e+07 1.55143e+07 240 1.53805e+07 1.00241e+07 0.00194346 1.57221e+07 50.5492 0.0264303 0.99588 0 50.0664 GTEX-XGQ4-0626-SM-4AT56 1 B1 2 pieces 3.5x3 & 5x3mm; ~50% occlusive atherosclerosis, focally calcified; adherent fat on both up to 2mm thick, rep, areas delineated 6.5 Blood Vessel Artery - Coronary 0001621 148 976 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989956 265315 0.971047 0.992132 0.83476 21623 1 76 0.00178322 130 0 5.96611e+07 0.0287169 471159 6.01343e+07 5.16512e+06 21638 2.96973e+07 0 0.136287 0.992132 0.828192 5.96611e+07 0.00275503 1.28194e+07 5.74161e+06 1.29773e+07 151 1.29381e+07 9.76558e+06 0.00226806 1.29829e+07 50.0864 0.00783512 0.994308 0 50.306 GTEX-XGQ4-0826-SM-4AT4T 1 B1 2 pieces 6.5x6 & 8x4mm; moderate-marked emphysematous changes 8.6 Lung Lung 0008952 157 968 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988379 375625 0.974107 0.990363 0.813527 23116 1 76 0.00210723 139 0 6.81108e+07 0.025179 374536 6.87736e+07 5.99491e+06 23139 3.38867e+07 0 0.160579 0.990363 0.805687 6.81108e+07 0.00285927 1.50989e+07 8.06095e+06 1.51892e+07 163 1.52206e+07 1.22002e+07 0.0024825 1.52005e+07 49.967 0.00544592 0.992346 0 50.1491 GTEX-XGQ4-0926-SM-4AT4U 1 B1 2 pieces 8x5 & 9x7mm; focal ductal elements with gynecomastoic (papillary) epitheiial hyperplasia in one alquot; delineated 8.1 Breast Breast - Mammary Tissue 0008367 159 967 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988973 412000 0.972344 0.991436 0.822587 21683 1 76 0.00179205 138 0 6.53323e+07 0.0273709 498488 6.58967e+07 5.40703e+06 21698 3.24998e+07 0 0.149757 0.991436 0.815542 6.53323e+07 0.00274329 1.4376e+07 8.41377e+06 1.43678e+07 163 1.43985e+07 1.11203e+07 0.00226649 1.45076e+07 50.1887 0.00756469 0.9939 0 49.9857 GTEX-XGQ4-1026-SM-4AT4L 1 B1 2 pieces 16x6 & 10x8mm; 8.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 163 967 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991352 269134 0.976052 0.99338 0.839914 22110 1 76 0.00177126 159 0 6.729e+07 0.0236618 505218 6.77384e+07 5.88378e+06 22125 3.35023e+07 0 0.136138 0.99338 0.834354 6.729e+07 0.00255457 1.4784e+07 6.55876e+06 1.49222e+07 172 1.49225e+07 1.20683e+07 0.00216212 1.49167e+07 49.9903 0.00745837 0.995408 0 50.2327 GTEX-XGQ4-1226-SM-4AT67 1 B1 6 pieces up to 8x5m; ~10-20% thickness is mucosa, fairly well preserved 8.1 Colon Colon - Transverse 0001157 169 961 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98975 267236 0.973755 0.991788 0.831202 22608 1 76 0.00192765 142 0 6.23535e+07 0.0255504 621268 6.28698e+07 5.40104e+06 22623 3.10281e+07 0 0.142553 0.991788 0.824377 6.23535e+07 0.00273661 1.36738e+07 6.59814e+06 1.37564e+07 151 1.37512e+07 1.1089e+07 0.0023313 1.37996e+07 50.0878 0.00988183 0.993826 0 50.1506 GTEX-XGQ4-1326-SM-4GIDU 1 B1 6 pieces up to 7x4mm; well -preserved prominent lymphoid aggregates delineated, ~30% of total 8.8 Small Intestine Small Intestine - Terminal Ileum 0001211 173 959 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.986694 400126 0.971196 0.990276 0.799878 24092 1 76 0.00260946 164 0 7.5159e+07 0.0275422 399199 7.5897e+07 7.43016e+06 24117 3.73115e+07 0 0.171318 0.990276 0.7921 7.5159e+07 0.00412362 1.67284e+07 8.78831e+06 1.67465e+07 168 1.68371e+07 1.3319e+07 0.0033638 1.6897e+07 50.0887 0.00525975 0.993858 0 50.027 GTEX-XGQ4-1526-SM-4AT6H 1 B1 6 pieces up to 7x3mm; 20-25 % thickn is squqmous mucosa, well-preserved 8.4 Esophagus Esophagus - Mucosa 0006920 179 955 BP-32471 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990464 291270 0.976458 0.992288 0.843438 21915 1 76 0.00183092 142 0 6.653e+07 0.0231503 261868 6.70471e+07 5.82264e+06 21929 3.31261e+07 0 0.133019 0.992288 0.836933 6.653e+07 0.00254481 1.50244e+07 9.49605e+06 1.50996e+07 151 1.51418e+07 1.43683e+07 0.00218721 1.51006e+07 49.9319 0.00390573 0.994111 0 50.1248 GTEX-XGQ4-1626-SM-4AT6J 1 B1 6 pieces up to 7x3mm; 90% muscularis, rest is serosal fibrous tisssue, delineated 6.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 182 952 BP-32471 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987554 326424 0.97025 0.989786 0.800029 21784 1 76 0.00187034 131 0 5.94845e+07 0.0295347 673564 6.00984e+07 5.13263e+06 21806 2.95876e+07 0 0.170221 0.989786 0.791857 5.94845e+07 0.00279532 1.29224e+07 5.88193e+06 1.30199e+07 146 1.29799e+07 9.35578e+06 0.00233179 1.30924e+07 50.2158 0.0112077 0.992018 0 50.188 GTEX-XGQ4-1726-SM-4RH4G 1 B1 6 pieces up to 10x4mm; Only ~25% muscle (2 aliquots, delineated( rest is fat 7.2 Colon Colon - Sigmoid 0001159 184 951 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3856 09/15/2013 TruSeq.v1 EXCLUDE 0.989984 464008 0.973672 0.992922 0.820854 22380 1 76 0.00211605 152 0 6.8865e+07 0.0260596 533595 6.93559e+07 5.44806e+06 22397 3.42449e+07 0 0.152818 0.992922 0.815044 6.8865e+07 0.00322215 1.51384e+07 8.74868e+06 1.51991e+07 172 1.51988e+07 1.17841e+07 0.00266746 1.53358e+07 50.2243 0.00769358 0.995859 0 50.1001 GTEX-XGQ4-1826-SM-4AT6F 1 B1 2 pieces 10x7 & 10x7mm Nodular glandular hyperplasia, rep areas delineated 7.2 Prostate Prostate 0002367 186 949 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3137,LCSET-3309 06/09/2013 TruSeq.v1 RNASEQ 0.989402 357865 0.962359 0.991922 0.787153 24239 1 76 0.00192949 137 0 6.9638e+07 0.0373689 408712 7.02051e+07 4.76792e+06 24268 3.46415e+07 0 0.175206 0.991922 0.780794 6.9638e+07 0.00268292 1.51633e+07 9.6647e+06 1.52384e+07 165 1.52482e+07 1.10935e+07 0.00230525 1.5324e+07 50.124 0.00582168 0.994441 0 50.1235 GTEX-XGQ4-2026-SM-4AT6G 1 B1 2 pieces 8x6 & 8.5x7mm; reduced spermatogenesis; well preserved 7.2 Testis Testis 0000473 192 945 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989351 413973 0.934075 0.991709 0.738011 32031 1 76 0.00190373 143 0 7.4409e+07 0.0655886 705892 7.50311e+07 6.65439e+06 32081 3.70242e+07 0 0.196064 0.991709 0.731893 7.4409e+07 0.0025737 1.56268e+07 9.8859e+06 1.56508e+07 152 1.57392e+07 1.2931e+07 0.00223792 1.57001e+07 49.9378 0.00940799 0.994067 0 50.0383 GTEX-XGQ4-2226-SM-4AT4Y 0 B1 2 pieces 11x7 & 15x7mm; ~20-30% fibrous bands, rep. areas delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 196 942 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990327 256218 0.974328 0.992186 0.815901 22639 1 76 0.00183075 166 0 7.37769e+07 0.0253858 382656 7.4358e+07 6.51774e+06 22660 3.67385e+07 0 0.158427 0.992186 0.809526 7.37769e+07 0.00253846 1.62352e+07 7.22709e+06 1.63252e+07 182 1.63405e+07 1.32967e+07 0.00218394 1.63517e+07 50.0172 0.00514613 0.994045 0 50.1382 GTEX-XGQ4-2326-SM-4AT53 0 B1 2 pieces 10x8 & 9x8mm; minimal interstitial fat 7.4 Muscle Muscle - Skeletal 0011907 199 939 BP-32474 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991801 243360 0.981492 0.993613 0.882779 22923 1 76 0.00158679 162 0 6.55958e+07 0.0183057 1.17955e+06 6.60175e+07 5.54234e+06 22933 3.26751e+07 0 0.0987128 0.993613 0.877141 6.55958e+07 0.00229679 1.43056e+07 7.44184e+06 1.4362e+07 172 1.43328e+07 1.29922e+07 0.00194114 1.44469e+07 50.1982 0.0178672 0.995425 0 50.0983 GTEX-XGQ4-2426-SM-4AT55 0 B1 2 pieces 2.5x2 & 2x2mm; adherent fibrous/peripheral nerve focally, delineated 8.1 Blood Vessel Artery - Tibial 0007610 209 930 BP-32474 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990786 318828 0.973756 0.992848 0.839615 20801 1 76 0.00180051 137 0 6.19493e+07 0.0258921 253606 6.23955e+07 5.55622e+06 20815 3.08341e+07 0 0.134141 0.992848 0.83361 6.19493e+07 0.00257536 1.32914e+07 5.52882e+06 1.33925e+07 145 1.33983e+07 1.2136e+07 0.00218713 1.34099e+07 50.0217 0.00406449 0.994911 0 50.1894 GTEX-XGQ4-2526-SM-4AT57 0 B1 2 pieces ~6x3.5mm, good clean speimens, no adherent fat 5.9 Nerve Nerve - Tibial 0001323 212 928 BP-32474 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989662 356114 0.96874 0.991717 0.798992 22665 1 76 0.00186694 143 0 6.17965e+07 0.0310296 257006 6.23126e+07 5.29838e+06 22693 3.07454e+07 0 0.169748 0.991717 0.792375 6.17965e+07 0.00277258 1.35726e+07 5.77593e+06 1.36526e+07 151 1.3651e+07 1.00852e+07 0.00231882 1.37012e+07 50.0917 0.00412446 0.993773 0 50.147 GTEX-XGQ4-2626-SM-4AT6B 1 B1 2 pieces 4x4 & 2x2mm; one aliquot has 1.4mm nodule of gland, the rest (~70%) is squamous mucosa/fibrous tissue, hteo the other is mainly gland (delineated) 7.8 Salivary Gland Minor Salivary Gland 0006330 219 921 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987946 354170 0.971778 0.990008 0.800075 23207 1 76 0.00242317 152 0 6.53758e+07 0.0265216 288763 6.60355e+07 5.5012e+06 23230 3.24621e+07 0 0.171703 0.990008 0.792081 6.53758e+07 0.0033177 1.47399e+07 1.38519e+07 1.47589e+07 161 1.48059e+07 1.07817e+07 0.0028695 1.48268e+07 50.0353 0.00437284 0.992071 0 50.0322 GTEX-XK95-0005-SM-4AT4S C1 6.7 Blood Whole Blood 0013756 552 BP-31323 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.968712 423879 0.976635 0.971569 0.829447 17504 1 76 0.00194187 106 0 6.9372e+07 0.0210899 946621 7.1402e+07 6.39666e+06 17507 3.43916e+07 0 0.147188 0.971569 0.805865 6.9372e+07 0.00355417 1.61113e+07 9.31211e+07 1.63538e+07 131 1.62907e+07 1.62868e+07 0.00274565 1.63877e+07 50.1484 0.0132576 0.974426 0 50.3735 GTEX-XK95-0008-SM-4AT5G C1 8.9 Skin Cells - Cultured fibroblasts EFO_0002009 693 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.992321 353639 0.969632 0.994146 0.83344 19899 1 76 0.00171614 137 0 5.3844e+07 0.0299945 136907 5.41611e+07 4.64274e+06 19919 2.68133e+07 0 0.136193 0.994146 0.828561 5.3844e+07 0.00236912 1.19673e+07 7.35204e+06 1.1997e+07 126 1.20509e+07 1.09909e+07 0.00204203 1.20102e+07 49.9154 0.00252777 0.995971 0 50.0618 GTEX-XK95-0226-SM-4AT58 1 C1 6 pieces. up to 7x3mm; Well dissected. 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 691 1204 BP-32413 RNA isolation_PAXgene Tissue miRNA 10/22/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987046 274201 0.977048 0.989082 0.789156 22506 1 76 0.00202378 135 0 6.05876e+07 0.0227606 508342 6.12564e+07 5.24432e+06 22526 3.01381e+07 0 0.187892 0.989082 0.78054 6.05876e+07 0.00294107 1.34662e+07 7.65065e+06 1.35106e+07 146 1.35137e+07 9.73923e+06 0.00248148 1.35864e+07 50.1341 0.00829859 0.991118 0 50.0823 GTEX-XK95-0426-SM-4AT4R 1 C1 2 pieces. 9x5 & 8x7mm; Well fixed. 5-10% fibrous content. 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 695 1201 BP-32102 RNA isolation_PAXgene Tissue miRNA 10/12/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987816 239897 0.976273 0.989909 0.76341 21302 1 76 0.00202835 124 0 5.83828e+07 0.0234563 345458 5.89779e+07 5.17447e+06 21321 2.90414e+07 0 0.212863 0.989909 0.755706 5.83828e+07 0.00278109 1.29102e+07 7.56067e+06 1.29682e+07 135 1.29904e+07 9.59147e+06 0.00240392 1.30121e+07 50.0418 0.00585741 0.992001 0 50.1121 GTEX-XK95-0726-SM-DMRPT 1 C1 2 pieces. 9x7 & 9x8mm; Hypertrophied fibers. Heart Heart - Left Ventricle 0006566 712 1185 BP-32473 DNA Isolation from Tissue via QIAgen Spin Column 10/24/2012 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-XK95-0726-SM-DMZ3A 1 C1 2 pieces. 9x7 & 9x8mm; Hypertrophied fibers. Heart Heart - Left Ventricle 0006566 712 1185 BP-32473 DNA Isolation from Tissue via QIAgen Spin Column 10/24/2012 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-XK95-1026-SM-4GIDV 1 C1 6 pieces. up to 7x2mm; Well dissected, well preserved mucosa 6.4 Esophagus Esophagus - Mucosa 0006920 729 1170 BP-32471 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.984996 286135 0.97365 0.988364 0.785548 22001 1 76 0.0023942 156 0 7.37865e+07 0.0261947 569823 7.46551e+07 7.47449e+06 22019 3.6669e+07 0 0.188102 0.988364 0.776408 7.37865e+07 0.00380329 1.64978e+07 9.80882e+06 1.65675e+07 176 1.66272e+07 1.13266e+07 0.00309635 1.66859e+07 50.0882 0.00763274 0.991733 0 50.1054 GTEX-XK95-2726-SM-4V6G6 2 C1 2 pieces. 8x6 & 8.5x7mm; 6 Testis Testis 0000473 778 1140 BP-36391 RNA isolation_PAXgene Tissue miRNA 02/22/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991413 481290 0.941272 0.992391 0.732855 31263 1 76 0.00244822 200 0 8.64582e+07 0.0585378 1.72553e+06 8.71211e+07 6.32184e+06 31316 4.30277e+07 0 0.208417 0.992391 0.727279 8.64582e+07 0.00288175 1.85728e+07 1.52614e+07 1.8648e+07 214 1.8633e+07 1.07061e+07 0.00266477 1.86733e+07 50.0539 0.0198061 0.99337 0 50.101 GTEX-XLM4-0003-SM-4YUW8 C1 Blood Whole Blood 0013756 555 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XLM4-0003-SM-53IUZ C1 Blood Whole Blood 0013756 555 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XLM4-0004-SM-4AT5I C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 555 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989648 1.12205e+06 0.961983 0.991746 0.812757 20784 1 76 0.00200717 151 0 7.63259e+07 0.0371853 490248 7.69611e+07 6.89412e+06 20808 3.79641e+07 0 0.149226 0.991746 0.806048 7.63259e+07 0.00273412 1.68375e+07 1.14585e+07 1.6902e+07 160 1.69716e+07 1.75232e+07 0.00236988 1.69262e+07 49.9331 0.00637008 0.993844 0 50.0955 GTEX-XLM4-0004-SM-5S2TF C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 555 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0005-SM-4AT4P C1 8.3 Blood Whole Blood 0013756 555 BP-31323 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.986464 684609 0.94758 0.988489 0.739283 19219 1 76 0.00281196 110 0 6.03471e+07 0.051533 97647 6.10498e+07 5.58614e+06 19235 3.0003e+07 0 0.208296 0.988489 0.730773 6.03471e+07 0.00379048 1.30912e+07 3.99089e+07 1.32527e+07 115 1.33089e+07 1.11081e+07 0.00330022 1.31749e+07 49.7471 0.00159946 0.990515 0 50.3065 GTEX-XLM4-0005-SM-5S2RY C1 8.3 Blood Whole Blood 0013756 555 BP-31323 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0008-SM-4AT4W C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 655 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991227 430817 0.978488 0.993343 0.862255 19949 1 76 0.00171033 143 0 6.65206e+07 0.0211032 189891 6.69664e+07 5.88911e+06 19963 3.31085e+07 0 0.116234 0.993343 0.856515 6.65206e+07 0.00241526 1.48812e+07 8.01197e+06 1.49115e+07 142 1.49759e+07 1.69951e+07 0.00206205 1.49554e+07 49.9659 0.00283562 0.995459 0 50.0509 GTEX-XLM4-0011-R10A-SM-4AT5P C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990724 432874 0.963486 0.992699 0.839792 23329 1 76 0.00196043 157 0 6.61239e+07 0.0359991 1.88416e+06 6.66102e+07 5.83866e+06 23342 3.29015e+07 0 0.123694 0.992699 0.833661 6.61239e+07 0.00274281 1.45349e+07 9.94774e+06 1.46045e+07 187 1.46299e+07 9.2657e+06 0.00235084 1.46301e+07 50.0003 0.0282863 0.994675 0 50.1195 GTEX-XLM4-0011-R10A-SM-5S2TN C1, A1 8 Brain Brain - Frontal Cortex (BA9) 0009834 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0011-R11A-SM-4AT46 C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 EXCLUDE 0.990016 395591 0.963987 0.992197 0.836649 22675 1 76 0.00192967 129 0 5.35478e+07 0.0355858 976223 5.39689e+07 4.63258e+06 22687 2.66372e+07 0 0.127338 0.992197 0.83012 5.35478e+07 0.0027221 1.17802e+07 7.46072e+06 1.18559e+07 142 1.18565e+07 8.29926e+06 0.00232502 1.18932e+07 50.0772 0.0180886 0.994378 0 50.1601 GTEX-XLM4-0011-R11A-SM-5S2SY C1, A1 7.7 Brain Brain - Cerebellar Hemisphere 0002037 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0011-R2B-SM-4AT5Z C1, A1 6.5 Brain Brain - Substantia nigra 0002038 569 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990074 316695 0.967156 0.992128 0.846101 22744 1 76 0.00199265 197 0 6.48837e+07 0.0325414 3.58924e+06 6.53985e+07 5.51346e+06 22761 3.22855e+07 0 0.121054 0.992128 0.839441 6.48837e+07 0.00280715 1.44476e+07 9.94848e+06 1.44525e+07 204 1.43786e+07 7.24911e+06 0.00239905 1.46477e+07 50.4636 0.0548825 0.994181 0 50.0084 GTEX-XLM4-0011-R3B-SM-4AT6E C1, A1 7.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 569 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137,LCSET-3618 07/23/2013 TruSeq.v1 RNASEQ 0.992451 636095 0.964637 0.993848 0.853386 24457 1 76 0.00184475 272 0 9.75787e+07 0.0347832 3.00542e+06 9.81828e+07 6.51169e+06 24473 4.85833e+07 0 0.11125 0.993848 0.848136 9.75787e+07 0.00238887 2.1465e+07 1.50055e+07 2.16077e+07 324 2.16176e+07 1.41932e+07 0.00211643 2.15824e+07 49.9592 0.0306104 0.995244 0 50.1657 GTEX-XLM4-0011-R4B-SM-4AT5C C1, A1 7.3 Brain Brain - Amygdala 0001876 569 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990767 380523 0.958532 0.992635 0.832596 22461 1 76 0.00197719 133 0 5.62218e+07 0.0411043 2.41091e+06 5.66389e+07 4.72432e+06 22476 2.79857e+07 0 0.125936 0.992635 0.826464 5.62218e+07 0.00274085 1.23005e+07 1.08587e+07 1.23753e+07 156 1.23416e+07 6.923e+06 0.0023583 1.24384e+07 50.1953 0.0425663 0.994503 0 50.1516 GTEX-XLM4-0011-R6A-SM-4AT4B C1, A1 8.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 569 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990352 517597 0.957088 0.992266 0.811138 24585 1 76 0.0020522 269 0 8.17056e+07 0.0422946 2.18419e+06 8.23424e+07 7.19229e+06 24608 4.06585e+07 0 0.145949 0.992266 0.804865 8.17056e+07 0.00271806 1.785e+07 1.2727e+07 1.78723e+07 258 1.79376e+07 1.22701e+07 0.00238449 1.79361e+07 49.9979 0.0265257 0.994181 0 50.0311 GTEX-XLM4-0011-R7A-SM-4AT5L C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989443 382170 0.960446 0.991602 0.83375 22786 1 76 0.00199097 129 0 5.59766e+07 0.039154 2.07959e+06 5.64506e+07 4.75677e+06 22800 2.78489e+07 0 0.126696 0.991602 0.826748 5.59766e+07 0.00283724 1.22676e+07 1.01861e+07 1.23386e+07 152 1.2337e+07 7.35645e+06 0.00241318 1.23873e+07 50.1018 0.0368392 0.993761 0 50.1443 GTEX-XLM4-0011-R8A-SM-4AT44 C1, A1 8.4 Brain Brain - Hypothalamus 0001898 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.984053 385450 0.962838 0.986057 0.790888 23786 1 76 0.00203466 166 0 6.79063e+07 0.0367235 1.08257e+06 6.88665e+07 5.73397e+06 23812 3.37842e+07 0 0.17195 0.986057 0.779861 6.79063e+07 0.00276339 1.5006e+07 7.43408e+06 1.51408e+07 168 1.51314e+07 1.03276e+07 0.00239829 1.51469e+07 50.0255 0.0157198 0.988061 0 50.2235 GTEX-XLM4-0011-R9A-SM-4AT45 C1, A1 7 Brain Brain - Spinal cord (cervical c-1) 0006469 569 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988886 274625 0.96504 0.990973 0.844233 21525 1 76 0.00201706 184 0 6.34823e+07 0.0346835 3.67568e+06 6.40605e+07 5.31284e+06 21540 3.15904e+07 0 0.120807 0.990973 0.836612 6.34823e+07 0.00286078 1.42247e+07 1.07495e+07 1.42649e+07 198 1.41466e+07 7.01673e+06 0.00243803 1.44668e+07 50.5596 0.0573783 0.99306 0 50.0705 GTEX-XLM4-0226-SM-4AT4N 1 C1 2 pieces, 9x9 & 9x8mm; 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 656 779 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 LCSET-3137,LCSET-3618 07/23/2013 TruSeq.v1 RNASEQ 0.988991 311824 0.974124 0.990383 0.817879 23494 1 76 0.0020116 377 0 9.97324e+07 0.0255535 645484 1.00701e+08 6.45321e+06 23524 4.9647e+07 0 0.156245 0.990383 0.810013 9.97324e+07 0.00267577 2.19317e+07 1.14831e+07 2.20351e+07 331 2.20648e+07 1.67594e+07 0.00234322 2.204e+07 49.9719 0.00640992 0.991775 0 50.1176 GTEX-XLM4-0226-SM-5S2TL 1 C1 2 pieces, 9x9 & 9x8mm; 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 656 779 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0426-SM-4AT54 1 C1 2 pieces, 3x2 & 3x2mm; fairly clean specimens 7.2 Blood Vessel Artery - Tibial 0007610 711 725 BP-32474 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990545 270987 0.972728 0.992481 0.825056 21275 1 76 0.00196133 138 0 6.48283e+07 0.0269257 210052 6.53195e+07 5.86398e+06 21293 3.22653e+07 0 0.147673 0.992481 0.818852 6.48283e+07 0.00267272 1.39234e+07 5.68598e+06 1.40213e+07 151 1.40261e+07 1.23051e+07 0.00231633 1.40425e+07 50.0292 0.00321576 0.994418 0 50.1753 GTEX-XLM4-0426-SM-5S2T7 1 C1 2 pieces, 3x2 & 3x2mm; fairly clean specimens 7.2 Blood Vessel Artery - Tibial 0007610 711 725 BP-32474 RNA isolation_PAXgene Tissue miRNA 10/24/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-0726-SM-4AT64 2 C1 2 pieces, 7.5x7 & 8x8mm; unusually poorly preserved 6.2 Thyroid Thyroid 0002046 716 722 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.986457 230690 0.971407 0.988367 0.791287 23136 1 76 0.00202027 146 0 6.98159e+07 0.0282828 122574 7.06376e+07 5.98534e+06 23163 3.47344e+07 0 0.18012 0.988367 0.782082 6.98159e+07 0.00274916 1.53004e+07 7.57058e+06 1.53625e+07 156 1.53922e+07 1.30296e+07 0.00238401 1.54074e+07 50.0246 0.00173525 0.990278 0 50.1013 GTEX-XLM4-0726-SM-5S2SH 2 C1 2 pieces, 7.5x7 & 8x8mm; unusually poorly preserved 6.2 Thyroid Thyroid 0002046 716 722 BP-32244 RNA isolation_PAXgene Tissue miRNA 10/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-1026-SM-4AT51 1 C1 2 pieces, 11x9.5 & 8x6mm; 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 722 717 BP-32308 RNA isolation_PAXgene Tissue miRNA 10/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987467 242122 0.977963 0.989803 0.814219 22491 1 76 0.00204924 143 0 6.8727e+07 0.0216931 126826 6.94351e+07 6.09001e+06 22509 3.41868e+07 0 0.163744 0.989803 0.805916 6.8727e+07 0.00280354 1.51995e+07 7.55702e+06 1.52347e+07 158 1.52705e+07 1.32762e+07 0.0024255 1.5326e+07 50.0907 0.00182654 0.992139 0 50.0578 GTEX-XLM4-1526-SM-4AT6D 2 C1 2 pieces, 8.5x7 & 7x7mm; badly autolyzed tubules 6 Testis Testis 0000473 737 706 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988936 375291 0.93293 0.990909 0.739531 31512 1 76 0.00204738 144 0 6.92096e+07 0.0667371 939524 6.98445e+07 5.97059e+06 31565 3.44405e+07 0 0.193399 0.990909 0.732809 6.92096e+07 0.00286281 1.44397e+07 1.06354e+07 1.45003e+07 147 1.45461e+07 1.10309e+07 0.00245428 1.45227e+07 49.9598 0.0134516 0.992883 0 50.1047 GTEX-XLM4-1526-SM-5S2S1 2 C1 2 pieces, 8.5x7 & 7x7mm; badly autolyzed tubules 6 Testis Testis 0000473 737 706 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-1826-SM-5S2SC 2 C1 2 pieces, 8x7 & 8x7mm; diffuse hemorrhagic pneumonitis obliterates normal architecture, poorly preserved 7.8 Lung Lung 0008952 745 700 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XLM4-2026-SM-4AT4X 2 C1 2 pieces, 9x8 & 8x8mm; 6.9 Heart Heart - Atrial Appendage 0006631 749 699 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991326 249622 0.98043 0.993225 0.827498 20606 1 76 0.0018244 125 0 6.59143e+07 0.0193085 1.7689e+06 6.63639e+07 5.5296e+06 20618 3.28129e+07 0 0.152932 0.993225 0.821891 6.59143e+07 0.00271608 1.38906e+07 6.44338e+06 1.39183e+07 162 1.38957e+07 1.09099e+07 0.00226939 1.40267e+07 50.2347 0.0266545 0.995123 0 50.0499 GTEX-XLM4-2326-SM-4AT5E 2 C1 6 pieces, up to 7.5x3mm; squamous mucosa poorly preserved and sloughing, ~10% thickness where present 6.6 Esophagus Esophagus - Mucosa 0006920 764 686 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 TruSeq.v1 RNASEQ 0.990525 746779 0.976277 0.992392 0.785134 24915 1 76 0.00256294 376 0 1.3291e+08 0.0234626 604419 1.33929e+08 1.11705e+07 24958 6.60703e+07 0 0.191142 0.992392 0.779161 1.3291e+08 0.00321981 2.98937e+07 1.54018e+07 2.98314e+07 391 2.98583e+07 2.32379e+07 0.00289076 3.01157e+07 50.2146 0.00451299 0.99426 0 49.9478 GTEX-XLM4-2326-SM-4TT2D 2 C1 6 pieces, up to 7.5x3mm; squamous mucosa poorly preserved and sloughing, ~10% thickness where present 6.6 Esophagus Esophagus - Mucosa 0006920 764 686 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 10/06/2013 TruSeq.v1 EXCLUDE 0.990525 746779 0.976277 0.992392 0.785134 24915 1 76 0.00256294 376 0 1.3291e+08 0.0234626 604419 1.33929e+08 1.11705e+07 24958 6.60703e+07 0 0.191142 0.992392 0.779161 1.3291e+08 0.00321981 2.98937e+07 1.54018e+07 2.98314e+07 391 2.98583e+07 2.32379e+07 0.00289076 3.01157e+07 50.2146 0.00451299 0.99426 0 49.9478 GTEX-XLM4-2426-SM-DO3WY 1 C1 6 pieces, up to 9x3mm; all muscularis, good specimens Esophagus Esophagus - Muscularis 0004648 766 685 BP-32485 DNA Isolation from Tissue via QIAgen Spin Column 10/24/2012 LCSET-10562 02/14/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-XLM4-2926-SM-4AT59 1 C1 4 pieces, up to 7x4.5mm; Purkinje layer well preserved 6.3 Brain Brain - Cerebellum 0002037 786 668 BP-32521 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988821 258745 0.949201 0.990687 0.741621 22315 1 76 0.0021799 109 0 5.41773e+07 0.050496 841605 5.46865e+07 4.64876e+06 22336 2.6958e+07 0 0.20758 0.990687 0.734715 5.41773e+07 0.00298055 1.17477e+07 8.15059e+06 1.18084e+07 128 1.18368e+07 6.47804e+06 0.00257947 1.18133e+07 49.9504 0.0153896 0.992554 0 50.1289 GTEX-XLM4-3026-SM-4AT6L 1 C1 4 pieces, up to 7x4.5mm; 6.1 Brain Brain - Cortex 0001870 789 666 BP-32521 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989831 362753 0.966105 0.991919 0.830637 23139 1 76 0.00200221 157 0 6.56708e+07 0.0335743 2.1965e+06 6.62058e+07 5.7136e+06 23156 3.26643e+07 0 0.135468 0.991919 0.823925 6.56708e+07 0.00294132 1.44521e+07 8.2191e+06 1.45823e+07 194 1.45108e+07 7.80732e+06 0.00247077 1.46518e+07 50.2419 0.0331769 0.994007 0 50.2242 GTEX-XLM4-3126-SM-4AT6M 2 C1 1 piece, 9x5mm; all adenohypophysis, not well preserved 6.4 Pituitary Pituitary 0000007 790 665 BP-32521 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990299 327254 0.966125 0.991978 0.798033 23766 1 76 0.00195554 131 0 6.29086e+07 0.0335984 202995 6.34173e+07 5.32214e+06 23785 3.13073e+07 0 0.168092 0.991978 0.791631 6.29086e+07 0.00270318 1.34424e+07 8.03551e+06 1.34783e+07 147 1.34947e+07 1.07209e+07 0.00232873 1.35308e+07 50.0667 0.00320094 0.993656 0 50.0667 GTEX-XMD1-0004-SM-4YUWX_1 C1 Blood Whole Blood 0013756 810 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 GTEx_Option_1_OM25_redo 10/30/2013 Illumina OMNI SNP Array OMNI GTEX-XMD1-0004-SM-53IVF C1 Blood Whole Blood 0013756 810 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XMD1-0004-SM-7DLGN C1 Blood Whole Blood 0013756 810 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XMD1-0006-SM-4AT4Q C1 6.3 Blood Whole Blood 0013756 810 BP-31323 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.960621 360882 0.974122 0.963026 0.786902 18082 1 76 0.00227773 101 0 7.17591e+07 0.0236557 105511 7.45142e+07 6.70986e+06 18087 3.55909e+07 0 0.187221 0.963026 0.757807 7.17591e+07 0.00390141 1.65562e+07 1.06768e+08 1.68254e+07 115 1.68293e+07 1.74466e+07 0.00308754 1.67432e+07 49.8718 0.00141599 0.965431 0 50.4031 GTEX-XMD1-0008-SM-4AT41 C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 918 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991922 385630 0.980701 0.99396 0.859228 20206 1 76 0.00163688 160 0 7.56207e+07 0.0189532 238600 7.60802e+07 6.72312e+06 20219 3.76506e+07 0 0.121473 0.99396 0.854039 7.56207e+07 0.00228077 1.69127e+07 9.37224e+06 1.7069e+07 163 1.712e+07 1.96477e+07 0.00195816 1.70186e+07 49.8515 0.00313616 0.995999 0 50.23 GTEX-XMD1-0011-R10A-SM-4AT4A C1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 820 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990308 276152 0.962643 0.992364 0.82838 22939 1 76 0.00206805 167 0 6.43891e+07 0.0369164 3.50474e+06 6.48846e+07 5.7265e+06 22956 3.2048e+07 0 0.134263 0.992364 0.822054 6.43891e+07 0.00280609 1.41807e+07 8.6039e+06 1.42962e+07 174 1.42501e+07 8.88258e+06 0.0024363 1.43507e+07 50.176 0.0540149 0.99442 0 50.2028 GTEX-XMD1-0011-R10A-SM-CYKRE C1, A1 6.9 Brain Brain - Frontal Cortex (BA9) 0009834 820 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 RIP-Seq GTEX-XMD1-0011-R10a-SM-AHZNY C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 820 ChIP-Seq GTEX-XMD1-0011-R11A-SM-4AT5J C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 820 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987673 428071 0.940498 0.989942 0.710815 22272 1 76 0.00249893 129 0 6.63701e+07 0.0591204 1.50308e+06 6.70445e+07 5.74791e+06 22299 3.29752e+07 0 0.229682 0.989942 0.703666 6.63701e+07 0.00336491 1.42226e+07 1.00805e+07 1.43334e+07 151 1.43725e+07 7.12519e+06 0.00293093 1.4323e+07 49.9137 0.0224191 0.99221 0 50.194 GTEX-XMD1-0011-R1A-SM-4AT4C C1, A1 6.7 Brain Brain - Hippocampus 0001954 820 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98923 338121 0.965574 0.991315 0.834817 22917 1 76 0.00219153 277 0 7.74564e+07 0.0340976 6.95438e+06 7.8135e+07 6.69958e+06 22935 3.85418e+07 0 0.130757 0.991315 0.827567 7.74564e+07 0.00311335 1.71726e+07 1.28462e+07 1.72946e+07 260 1.7178e+07 8.90399e+06 0.00265147 1.74454e+07 50.3862 0.0890046 0.993401 0 50.177 GTEX-XMD1-0011-R2B-SM-4AT5N C1, A1 6 Brain Brain - Substantia nigra 0002038 820 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.98874 260523 0.97149 0.990777 0.848317 21503 1 76 0.00224477 188 0 6.36347e+07 0.0282661 6.43682e+06 6.42271e+07 5.60191e+06 21513 3.16637e+07 0 0.123173 0.990777 0.840493 6.36347e+07 0.00310447 1.40483e+07 1.3994e+07 1.42056e+07 203 1.39676e+07 5.78427e+06 0.00267373 1.44063e+07 50.773 0.10022 0.992814 0 50.2783 GTEX-XMD1-0011-R3B-SM-4AT5R C1, A1 6.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 820 BP-34513 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987263 292652 0.963882 0.989771 0.84607 22460 1 76 0.00223055 160 0 6.24124e+07 0.0357826 4.97676e+06 6.30574e+07 5.62348e+06 22474 3.10405e+07 0 0.117812 0.989771 0.837416 6.24124e+07 0.00310478 1.37928e+07 1.05821e+07 1.38538e+07 184 1.3785e+07 7.06571e+06 0.00266656 1.40105e+07 50.4057 0.0789243 0.992278 0 50.1103 GTEX-XMD1-0011-R5A-SM-4AT47 C1, A1 7.8 Brain Brain - Caudate (basal ganglia) 0001873 820 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988705 509553 0.958005 0.99084 0.789475 24597 1 76 0.00224546 153 0 6.84186e+07 0.0416371 3.60272e+06 6.90511e+07 6.03283e+06 24621 3.40221e+07 0 0.16853 0.99084 0.782244 6.84186e+07 0.00306314 1.49296e+07 1.36115e+07 1.50552e+07 179 1.50552e+07 8.49288e+06 0.00265342 1.50721e+07 50.028 0.0521746 0.992975 0 50.2096 GTEX-XMD1-0011-R6A-SM-4AT5K C1, A1 7.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 820 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.988678 563261 0.954462 0.991228 0.817391 23426 1 76 0.00228225 148 0 6.30451e+07 0.0452043 4.62909e+06 6.36031e+07 5.54412e+06 23443 3.13384e+07 0 0.137071 0.991228 0.810221 6.30451e+07 0.00312433 1.36621e+07 1.41019e+07 1.38307e+07 172 1.38183e+07 7.24826e+06 0.00270221 1.38295e+07 50.0202 0.0727809 0.993777 0 50.3067 GTEX-XMD1-0011-R8A-SM-4AT48 C1, A1 7.5 Brain Brain - Hypothalamus 0001898 820 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.989383 398088 0.961039 0.991435 0.791899 24771 1 76 0.00214479 165 0 7.45804e+07 0.0385877 2.97559e+06 7.52247e+07 6.49022e+06 24808 3.71041e+07 0 0.169141 0.991435 0.785116 7.45804e+07 0.00292394 1.6447e+07 1.07895e+07 1.64895e+07 196 1.6497e+07 1.04093e+07 0.00253356 1.65879e+07 50.1373 0.039556 0.993487 0 50.0645 GTEX-XMD1-0011-R9A-SM-4AT49 C1, A1 7.2 Brain Brain - Spinal cord (cervical c-1) 0006469 820 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990181 356729 0.960435 0.992106 0.793813 22619 1 76 0.00194208 163 0 6.34819e+07 0.0391245 1.27759e+06 6.3987e+07 5.19397e+06 22638 3.15831e+07 0 0.166622 0.992106 0.787547 6.34819e+07 0.00281204 1.40727e+07 7.94008e+06 1.42106e+07 157 1.41534e+07 9.95969e+06 0.00237622 1.42527e+07 50.1748 0.0199663 0.994031 0 50.2437 GTEX-XMD1-0426-SM-EYYVJ 1 C1 2 pieces 4x2 & 4x2mm; good clean specimens 5.6 Blood Vessel Artery - Tibial 0007610 923 1432 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.988196 175771 0.971698 0.990451 0.79805 21848 1 76 0.00236032 206 0 8.56938e+07 0.0279763 610065 8.652e+07 3.0159e+06 21876 4.26377e+07 0 0.173647 0.990451 0.79043 8.56938e+07 0.00318436 1.8401e+07 6.30171e+06 1.8565e+07 249 1.85588e+07 1.40455e+07 0.0027714 1.8588e+07 50.0393 0.00705114 0.992706 0 50.2219 GTEX-XMD1-0526-SM-4AT4Z 1 C1 2 pieces 5.5x4 & 5x3mm; gnerally clean specimens, focal 0.5mm adherent nubbing of fat on one adlquot, delineated 6.5 Nerve Nerve - Tibial 0001323 924 1432 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.984276 525186 0.966869 0.986645 0.748109 23245 1 76 0.00218042 165 0 7.01932e+07 0.0328687 317286 7.11433e+07 6.425e+06 23283 3.48625e+07 0 0.218759 0.986645 0.738118 7.01932e+07 0.00296505 1.5422e+07 7.351e+06 1.54171e+07 160 1.55775e+07 1.06838e+07 0.00257179 1.5427e+07 49.7572 0.00445981 0.989014 0 49.9921 GTEX-XMD1-0626-SM-CYKP5 1 C1 2 pieces 11x8 & 11x9mm; 5.8 Muscle Muscle - Skeletal 0011907 926 1430 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 RIP-Seq GTEX-XMD1-0626-SM-EZ6MC 1 C1 2 pieces 11x8 & 11x9mm; 5.8 Muscle Muscle - Skeletal 0011907 926 1430 BP-32483 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.990185 368919 0.977825 0.992159 0.821833 22199 1 76 0.00243808 283 0 1.07505e+08 0.0219605 2.16558e+06 1.08355e+08 8.28574e+06 22222 5.35507e+07 0 0.155992 0.992159 0.815389 1.07505e+08 0.00406896 2.35812e+07 9.79092e+06 2.37369e+07 322 2.37576e+07 1.89543e+07 0.0032519 2.37492e+07 49.9912 0.019986 0.994134 0 50.1645 GTEX-XMD1-0826-SM-4AT52 1 C1 2 pieces 10x6.5 & 11x7mm; gynecomastoid hyperplasia 6.4 Breast Breast - Mammary Tissue 0008367 931 1426 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.986697 290203 0.970132 0.9891 0.746889 24228 1 76 0.00221317 161 0 7.54604e+07 0.0296043 659583 7.62919e+07 6.84114e+06 24265 3.75167e+07 0 0.223242 0.9891 0.738748 7.54604e+07 0.00302803 1.65655e+07 8.57255e+06 1.66823e+07 172 1.67086e+07 1.15657e+07 0.00261961 1.67184e+07 50.0146 0.00864551 0.991503 0 50.1757 GTEX-XMD1-2826-SM-4AT5F 1 C1 4 pieces up to 6x3mm; anoxic changes 6.4 Brain Brain - Cerebellum 0002037 987 1379 BP-32697 RNA isolation_PAXgene Tissue miRNA 10/31/2012 LCSET-3137,LCSET-3618 07/23/2013 TruSeq.v1 RNASEQ 0.989708 278138 0.948312 0.991069 0.719955 22667 1 76 0.00242258 129 0 6.64291e+07 0.0513835 1.30318e+06 6.70278e+07 4.09329e+06 22693 3.30488e+07 0 0.228357 0.991069 0.713525 6.64291e+07 0.00303635 1.43889e+07 7.53918e+06 1.44637e+07 153 1.44849e+07 7.33701e+06 0.00272904 1.44499e+07 49.9396 0.0194424 0.99243 0 50.1297 GTEX-XMD1-2926-SM-4AT42 1 C1 4 pieces up to 6x5mm; 6.1 Brain Brain - Cortex 0001870 990 1376 BP-32697 RNA isolation_PAXgene Tissue miRNA 10/31/2012 LCSET-3137 05/15/2013 TruSeq.v1 EXCLUDE 0.988703 231263 0.96928 0.990577 0.817464 23270 1 76 0.00220248 132 0 5.95526e+07 0.0304385 2.87957e+06 6.01191e+07 4.9707e+06 23288 2.96288e+07 0 0.151816 0.990577 0.809762 5.95526e+07 0.00305488 1.31376e+07 7.1826e+06 1.32385e+07 158 1.31918e+07 7.76495e+06 0.00262787 1.329e+07 50.1853 0.0478978 0.992452 0 50.1914 GTEX-XMD2-0001-SM-4YUVJ C1 Blood Whole Blood 0013756 1194 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XMD2-0001-SM-53IUM C1 Blood Whole Blood 0013756 1194 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XMD2-0001-SM-7DLGS C1 Blood Whole Blood 0013756 1194 BP-31319 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/20/2012 LCSET-6363 01/10/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XMD2-0006-SM-4WWEG C1 7.7 Blood Whole Blood 0013756 1194 BP-31323 RNA isolation_PAXgene Blood RNA (Manual) 09/20/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.973939 1.4122e+06 0.940077 0.977339 0.749655 20693 1 76 0.00332392 126 0 9.56054e+07 0.0584223 534003 9.78222e+07 1.34853e+07 20708 4.74224e+07 0 0.190422 0.977339 0.732667 9.56054e+07 0.00510942 2.1049e+07 1.30468e+08 2.12212e+07 158 2.12928e+07 2.04502e+07 0.00421356 2.13258e+07 50.0388 0.00545892 0.980739 0 50.2037 GTEX-XMD2-0008-SM-4WWE7 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1340 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988858 831921 0.965646 0.99176 0.852085 21426 1 76 0.00239344 278 0 1.01132e+08 0.0340659 475387 1.01972e+08 1.3698e+07 21444 5.02787e+07 0 0.11356 0.99176 0.845064 1.01132e+08 0.00374656 2.22396e+07 3.01962e+07 2.23501e+07 266 2.23911e+07 2.42999e+07 0.00306802 2.2498e+07 50.1191 0.00466192 0.994663 0 50.124 GTEX-XMD2-0126-SM-4YCDU 1 C1 6 pieces, up to 7.5x3mm; well trimmed, no subcutaneous adipose 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 1339 1174 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.984308 682888 0.964936 0.989777 0.774637 24782 1 76 0.00261645 180 0 8.37257e+07 0.0348109 422860 8.45905e+07 1.29583e+07 24818 4.15132e+07 0 0.190299 0.989777 0.766718 8.37257e+07 0.00470234 1.80865e+07 1.55066e+07 1.81832e+07 184 1.83082e+07 1.4004e+07 0.00365363 1.84073e+07 50.135 0.00499891 0.995246 0 50.1332 GTEX-XMD2-0226-SM-4WWEE 1 C1 2 pieces, 8.5x8 & 10x7.5mm; 1 piece has focal calcification and possible ossification; other has 50% blood vessels 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 1341 1172 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988551 360706 0.973249 0.991085 0.787371 24739 1 76 0.00290619 208 0 9.21956e+07 0.0263041 382338 9.3025e+07 1.21553e+07 24770 4.5828e+07 0 0.185878 0.991085 0.780352 9.21956e+07 0.00427597 2.03269e+07 1.1332e+07 2.0374e+07 242 2.04129e+07 1.59661e+07 0.00358933 2.05153e+07 50.1251 0.00411006 0.993619 0 50.0579 GTEX-XMD2-0326-SM-4YCD6 1 C1 2 pieces, 5x4 & 7x3mm; 20% peripheral adipose 6.5 Nerve Nerve - Tibial 0001323 1363 1151 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.986153 480451 0.963147 0.990404 0.746882 24405 1 76 0.00255778 160 0 7.63434e+07 0.0365841 213204 7.70831e+07 1.15317e+07 24444 3.78862e+07 0 0.216266 0.990404 0.739715 7.63434e+07 0.00459073 1.66e+07 1.13672e+07 1.67314e+07 167 1.67855e+07 1.18656e+07 0.00356989 1.68647e+07 50.1177 0.0027659 0.994655 0 50.197 GTEX-XMD2-0526-SM-4YCDI 2 C1 2 pieces, 9x8 & 10x9mm; patchy atrophy (ischemic probably) 8.7 Muscle Muscle - Skeletal 0011907 1368 1147 BP-36411 RNA isolation_PAXgene Tissue miRNA 02/25/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.982914 462182 0.93328 0.987527 0.761418 24059 1 76 0.00249534 126 0 6.15276e+07 0.0664908 802984 6.23047e+07 9.00162e+06 24078 3.05212e+07 0 0.171862 0.987527 0.751921 6.15276e+07 0.00444278 1.28336e+07 9.65124e+06 1.29348e+07 127 1.29878e+07 1.19461e+07 0.00346451 1.30489e+07 50.1172 0.012888 0.992141 0 50.1963 GTEX-XMD2-0926-SM-4WWEF 1 C1 2 pieces, 8x6 & 6x6mm; atrophy; a few ducts in 1 piece 6.7 Breast Breast - Mammary Tissue 0008367 1394 1124 BP-32501 RNA isolation_PAXgene Tissue miRNA 10/24/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.980419 381970 0.971482 0.984529 0.779913 25143 1 76 0.00314683 200 0 8.85331e+07 0.0274248 577554 8.99243e+07 1.25802e+07 25177 4.38834e+07 0 0.19157 0.984529 0.767846 8.85331e+07 0.00472147 1.94404e+07 1.54822e+07 1.95735e+07 205 1.96647e+07 1.43962e+07 0.00393086 1.97127e+07 50.0609 0.00642267 0.988639 0 50.1706 GTEX-XMD2-1026-SM-4WWE8 2 C1 2 pieces, 10x8 & 9x7mm; focal subpleural fibrosis (BSS: please take specimens 1 cm beneath pleural surface) 6 Lung Lung 0008952 1396 1122 BP-32697 RNA isolation_PAXgene Tissue miRNA 10/31/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984492 397937 0.966222 0.988668 0.738367 24668 1 76 0.00310641 151 0 7.75185e+07 0.0334114 550838 7.8407e+07 1.03812e+07 24710 3.84417e+07 0 0.227855 0.988668 0.73 7.75185e+07 0.00523074 1.69988e+07 1.19678e+07 1.70104e+07 169 1.70794e+07 1.04003e+07 0.00416409 1.72423e+07 50.2373 0.00702537 0.992844 0 50.0171 GTEX-XMD2-1326-SM-4YCET 2 C1 6 pieces, up to 6x2mm; epithelium partially sloughed. LDACC note: esophagus epithelium is normally about 10% of the mucosal thickness; muscle and stroma make up the rest. 6.3 Esophagus Esophagus - Mucosa 0006920 1402 1118 BP-36486 RNA isolation_PAXgene Tissue miRNA 02/26/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.986364 303605 0.96569 0.990637 0.806318 22964 1 76 0.00260195 132 0 6.37408e+07 0.0341262 1.27095e+06 6.43432e+07 9.45404e+06 22979 3.16383e+07 0 0.159372 0.990637 0.798768 6.37408e+07 0.00462327 1.40826e+07 9.37779e+06 1.41487e+07 163 1.41678e+07 8.17712e+06 0.00360825 1.43298e+07 50.2842 0.0197527 0.99491 0 50.1172 GTEX-XMD2-2126-SM-4YCF8 1 C1 6 pieces, up to 9.5x3mm; up to 1mm subcutaneous adipose 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1420 1107 BP-36525 RNA isolation_PAXgene Tissue miRNA 02/27/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.98535 569056 0.971331 0.990038 0.750269 23956 1 76 0.002649 155 0 7.44919e+07 0.0284482 591984 7.52415e+07 1.21527e+07 23987 3.69525e+07 0 0.221063 0.990038 0.742794 7.44919e+07 0.00465688 1.63444e+07 1.25007e+07 1.64568e+07 164 1.65359e+07 1.14225e+07 0.00364819 1.66121e+07 50.1151 0.00786779 0.994725 0 50.1714 GTEX-XMD3-0003-SM-4YUX3 C1 Blood Whole Blood 0013756 1292 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XMD3-0003-SM-53IVI C1 Blood Whole Blood 0013756 1292 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XMD3-0003-SM-7DRQ7 C1 Blood Whole Blood 0013756 1292 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XMD3-0006-SM-4AT5X C1 6.5 Blood Whole Blood 0013756 1292 BP-31508 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.979697 535663 0.962655 0.982128 0.777051 20295 1 76 0.0024776 120 0 6.99888e+07 0.0362728 416160 7.12624e+07 6.30048e+06 20309 3.47564e+07 0 0.185603 0.982128 0.763164 6.99888e+07 0.00366486 1.54342e+07 4.59117e+07 1.57291e+07 135 1.57402e+07 1.40219e+07 0.00306976 1.56068e+07 49.7872 0.00583982 0.984558 0 50.4732 GTEX-XMD3-0008-SM-4AT4V C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1339 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.991313 537574 0.973546 0.993416 0.855131 20175 1 76 0.00174039 150 0 6.65508e+07 0.0260695 375984 6.69918e+07 6.01232e+06 20193 3.31216e+07 0 0.118416 0.993416 0.849501 6.65508e+07 0.00238255 1.47417e+07 1.10099e+07 1.48268e+07 145 1.48779e+07 1.61709e+07 0.00206079 1.48349e+07 49.9277 0.00561239 0.99552 0 50.1439 GTEX-XMD3-2326-SM-4AT5H 1 C1 2 pieces. 9x8 & 9x8mm; atrophic, several corpora albicans 6 Ovary Ovary 0000992 1407 942 BP-32848 RNA isolation_PAXgene Tissue miRNA 11/05/2012 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.987606 303257 0.965645 0.989749 0.768899 22495 1 76 0.00199815 154 0 7.01632e+07 0.0341343 481815 7.08898e+07 6.37546e+06 22528 3.48997e+07 0 0.196746 0.989749 0.761017 7.01632e+07 0.00273598 1.52693e+07 1.01355e+07 1.53721e+07 156 1.53762e+07 1.30355e+07 0.00236627 1.54206e+07 50.072 0.00679667 0.991893 0 50.1677 GTEX-XMK1-0001-SM-4B64F B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -77 BP-32984 RNA isolation_Trizol Manual (Cell Pellet) 11/08/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988126 852039 0.962277 0.991369 0.794149 22099 1 76 0.00237017 180 0 9.43621e+07 0.0372068 492606 9.51836e+07 9.39423e+06 22130 4.69032e+07 0 0.168128 0.991369 0.787294 9.43621e+07 0.00324182 2.07518e+07 2.19901e+07 2.09417e+07 194 2.10784e+07 2.18642e+07 0.00280457 2.09123e+07 49.8023 0.00517532 0.994611 0 50.2278 GTEX-XMK1-0003-SM-4YUWQ B1 Blood Whole Blood 0013756 -76 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XMK1-0003-SM-53IVD B1 Blood Whole Blood 0013756 -76 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XMK1-0003-SM-5URB9 B1 Blood Whole Blood 0013756 -76 BP-31382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 09/24/2012 LCSET-5270,LCSET-5435 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XMK1-0005-SM-4B665 B1 8.4 Blood Whole Blood 0013756 -78 BP-31508 RNA isolation_PAXgene Blood RNA (Manual) 09/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.981784 914768 0.954141 0.984733 0.792427 19921 1 76 0.0024443 114 0 7.6935e+07 0.0448467 184513 7.81277e+07 7.59619e+06 19933 3.82183e+07 0 0.161714 0.984733 0.780329 7.6935e+07 0.00385121 1.71012e+07 9.34927e+07 1.72506e+07 134 1.72758e+07 1.76487e+07 0.00314565 1.73118e+07 50.052 0.00236168 0.987682 0 50.2176 GTEX-XMK1-0008-SM-4GICF B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 246 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.991489 514232 0.978871 0.994019 0.862532 21505 1 76 0.0021075 215 0 9.57733e+07 0.0207827 201149 9.63496e+07 1.00082e+07 21524 4.7673e+07 0 0.116339 0.994019 0.857373 9.57733e+07 0.00317276 2.15782e+07 1.10913e+07 2.16468e+07 247 2.17573e+07 2.39118e+07 0.00263878 2.17046e+07 49.9394 0.0020877 0.996548 0 50.0794 GTEX-XMK1-0126-SM-4B65F 1 B1 2 pieces. 10x8 & 10x8mm; 7.2 Spleen Spleen 0002106 137 1134 BP-32735 RNA isolation_PAXgene Tissue miRNA 11/01/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.983584 412040 0.964736 0.986488 0.790202 23843 1 76 0.00268326 142 0 7.28389e+07 0.0344793 294532 7.38366e+07 6.86596e+06 23870 3.61943e+07 0 0.174534 0.986488 0.779525 7.28389e+07 0.00389771 1.6022e+07 1.07983e+07 1.60838e+07 162 1.61343e+07 1.23017e+07 0.0032887 1.61825e+07 50.0746 0.00398897 0.989392 0 50.0964 GTEX-XMK1-0226-SM-4B65D 1 B1 2 pieces. 13x5 & 7x6mm; ~40% adherent/intermingled fat, delineated 8.9 Adrenal Gland Adrenal Gland 0002369 145 1127 BP-32735 RNA isolation_PAXgene Tissue miRNA 11/01/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989705 549006 0.974604 0.992804 0.831611 22908 1 76 0.00243424 271 0 9.54149e+07 0.0250825 1.36519e+06 9.61065e+07 9.60812e+06 22934 4.7456e+07 0 0.142993 0.992804 0.825627 9.54149e+07 0.00314641 2.09485e+07 1.27959e+07 2.10792e+07 290 2.11548e+07 1.62681e+07 0.00278921 2.11416e+07 49.9844 0.0142049 0.995903 0 50.1556 GTEX-XMK1-0326-SM-4B652 1 B1 2 pieces. 10.5x9 & 9x8.5mm; one is ~50-60% fat delineated; Islets well seen in both 6.9 Pancreas Pancreas 0001150 151 1121 BP-32735 RNA isolation_PAXgene Tissue miRNA 11/01/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.985139 1.00255e+06 0.964553 0.989189 0.828357 22746 1 76 0.00250297 127 0 1.0253e+08 0.0351644 315568 1.03651e+08 1.06276e+07 22774 5.09239e+07 0 0.136196 0.989189 0.819402 1.0253e+08 0.00360061 2.30569e+07 4.45197e+07 2.34387e+07 154 2.35124e+07 2.88858e+07 0.00304954 2.33945e+07 49.8743 0.00304452 0.993239 0 50.4106 GTEX-XMK1-0626-SM-4B65A 1 B1 2 pieces. 11x8 & 12x6mm; 6.5 Thyroid Thyroid 0002046 168 1106 BP-32848 RNA isolation_PAXgene Tissue miRNA 11/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.986553 538498 0.965325 0.990501 0.764343 24043 1 76 0.00240697 138 0 7.35408e+07 0.0343394 227180 7.42461e+07 7.10928e+06 24074 3.6526e+07 0 0.200982 0.990501 0.757082 7.35408e+07 0.00360578 1.60759e+07 8.60631e+06 1.61157e+07 158 1.61999e+07 1.20457e+07 0.00300399 1.62699e+07 50.1077 0.00305983 0.99445 0 50.0617 GTEX-XMK1-0926-SM-4B66X 1 B1 2 pieces. 12x7 & 12x9mm; 3mm incidental lymph node, delineated 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 185 1091 BP-32848 RNA isolation_PAXgene Tissue miRNA 11/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987426 410986 0.976138 0.991552 0.843576 23390 1 76 0.00254891 204 0 8.36465e+07 0.0236104 967567 8.43592e+07 8.28856e+06 23408 4.15583e+07 0 0.132561 0.991552 0.83645 8.36465e+07 0.0035352 1.83697e+07 9.45483e+06 1.84767e+07 249 1.85139e+07 1.26192e+07 0.00304 1.86496e+07 50.1825 0.0114696 0.995677 0 50.1452 GTEX-XMK1-1026-SM-4B65H 1 B1 2 pieces. 8x7 & 8x7mm; glands well preserved 7.2 Prostate Prostate 0002367 189 1088 BP-32848 RNA isolation_PAXgene Tissue miRNA 11/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.98645 474308 0.967808 0.990424 0.773081 25480 1 76 0.00245021 207 0 9.17896e+07 0.0318978 270183 9.26771e+07 9.28052e+06 25518 4.56041e+07 0 0.194728 0.990424 0.765678 9.17896e+07 0.003385 2.01288e+07 9.84139e+06 2.03224e+07 230 2.04293e+07 1.4629e+07 0.00291573 2.03689e+07 49.926 0.00291532 0.994398 0 50.2392 GTEX-XMK1-1126-SM-4IHJ8 1 B1 2 pieces. 15x11 & 14x13mm; 6 Breast Breast - Mammary Tissue 0008367 191 1087 BP-32848 RNA isolation_PAXgene Tissue miRNA 11/05/2012 LCSET-3596 07/23/2013 TruSeq.v1 RNASEQ 0.983349 233243 0.975299 0.985693 0.839345 21519 1 76 0.00234921 135 0 6.14132e+07 0.024481 696513 6.23046e+07 4.14142e+06 21534 3.05518e+07 0 0.135954 0.985693 0.827336 6.14132e+07 0.0031076 1.33949e+07 6.29278e+06 1.35956e+07 161 1.35499e+07 8.72117e+06 0.0027275 1.35702e+07 50.0373 0.0111792 0.988037 0 50.3717 GTEX-XMK1-1326-SM-4B65Q 1 B1 6 pieces. up to 7x3mm; 7.6 Esophagus Esophagus - Mucosa 0006920 198 1081 BP-33151 RNA isolation_PAXgene Tissue miRNA 11/14/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987679 606527 0.975017 0.990523 0.852215 23620 1 76 0.00256661 274 0 9.30453e+07 0.0246801 375949 9.39355e+07 8.65095e+06 23637 4.62777e+07 0 0.122802 0.990523 0.844139 9.30453e+07 0.00358338 2.08045e+07 1.35538e+07 2.09499e+07 257 2.09729e+07 1.82363e+07 0.00307354 2.10375e+07 50.0768 0.0040022 0.993367 0 50.1741 GTEX-XMK1-1526-SM-EYYVO 1 B1 6 pieces. up to 11x4mm; mucosa is ~25% thickness, well-preserved 5.9 Stomach Stomach 0000945 211 1069 BP-33151 RNA isolation_PAXgene Tissue miRNA 11/14/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.976802 144082 0.982957 0.980604 0.878889 21870 1 76 0.00210048 351 0 7.66227e+07 0.0168293 461165 7.81383e+07 2.53742e+06 21885 3.80596e+07 0 0.104068 0.980604 0.861841 7.66227e+07 0.00339604 1.77615e+07 1.02388e+08 1.79309e+07 241 1.80342e+07 2.33842e+07 0.00274575 1.79545e+07 49.8892 0.00590191 0.984405 0 50.2373 GTEX-XMK1-1726-SM-4B64Z 1 B1 6 pieces. up to 10x4mm; mucosa is ~10% thickness, reasonably well preserved but superficially sloughed 8.3 Colon Colon - Transverse 0001157 217 1064 BP-32697 RNA isolation_PAXgene Tissue miRNA 10/31/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984823 588314 0.972149 0.988074 0.816408 25408 1 76 0.00295057 287 0 1.18735e+08 0.0257688 901511 1.20168e+08 1.18181e+07 25450 5.89194e+07 0 0.155741 0.988074 0.806671 1.18735e+08 0.00376332 2.64799e+07 1.73311e+07 2.64119e+07 317 2.65345e+07 2.03359e+07 0.0033556 2.67221e+07 50.1761 0.00750207 0.991325 0 49.9357 GTEX-XMK1-1826-SM-4B66F 2 B1 6 pieces. up to 10x8mm abundant lymphoid elements, ~40% total 7.9 Small Intestine Small Intestine - Terminal Ileum 0001211 228 1054 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984765 883087 0.969363 0.988861 0.813983 24436 1 76 0.0024309 211 0 8.88815e+07 0.0303591 518377 8.98828e+07 8.71091e+06 24465 4.41435e+07 0 0.15538 0.988861 0.804916 8.88815e+07 0.00343056 1.91514e+07 1.22501e+07 1.93575e+07 239 1.94304e+07 1.5082e+07 0.00292866 1.9419e+07 49.9853 0.00576726 0.992957 0 50.2677 GTEX-XMK1-2026-SM-4B65K 0 B1 2 pieces. 9x8 & 10x9mm; spermatogenesis is present, fairly well-preserved 7.8 Testis Testis 0000473 239 1044 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988674 849006 0.929168 0.991233 0.722131 34643 1 76 0.00248847 284 0 1.17747e+08 0.0705154 1.16828e+06 1.18789e+08 1.13261e+07 34729 5.85821e+07 0 0.207037 0.991233 0.7158 1.17747e+08 0.00325155 2.46894e+07 2.1179e+07 2.4671e+07 284 2.48149e+07 1.8893e+07 0.00286903 2.48176e+07 50.0027 0.0098349 0.993792 0 49.9814 GTEX-XMK1-2226-SM-4B673 0 B1 2 pieces. 10x7 & 12x6.5mm; 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 249 1035 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989755 542379 0.970002 0.992302 0.808544 23767 1 76 0.00242969 168 0 8.02234e+07 0.0297202 642973 8.08457e+07 7.47345e+06 23787 3.99074e+07 0 0.161459 0.992302 0.802319 8.02234e+07 0.00330886 1.75122e+07 1.03911e+07 1.76118e+07 198 1.76482e+07 1.31504e+07 0.00286814 1.76717e+07 50.0332 0.00795309 0.994849 0 50.1418 GTEX-XMK1-2426-SM-4B66I 0 B1 2 pieces. 5x4 & 6x5mm; good clean specimen 6.4 Nerve Nerve - Tibial 0001323 257 1028 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984854 556003 0.960015 0.988909 0.724407 25441 1 76 0.00256239 166 0 8.58209e+07 0.0397398 368212 8.67834e+07 8.76922e+06 25489 4.26162e+07 0 0.235608 0.988909 0.716373 8.58209e+07 0.00357596 1.86243e+07 1.07963e+07 1.87922e+07 192 1.88888e+07 1.15936e+07 0.0030671 1.88639e+07 49.967 0.00424289 0.992965 0 50.2242 GTEX-XMK1-2526-SM-4B666 0 B1 2 pieces. 2x1 & 2x2mm; rim of fat ~0.5mm delineated 7.7 Blood Vessel Artery - Tibial 0007610 259 1027 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990191 480173 0.970947 0.992687 0.82363 22180 1 76 0.00230927 273 0 9.3349e+07 0.0287142 413967 9.40366e+07 8.88403e+06 22202 4.64509e+07 0 0.147318 0.992687 0.817607 9.3349e+07 0.00319897 2.00046e+07 1.02346e+07 2.01647e+07 267 2.01817e+07 1.70066e+07 0.002753 2.02125e+07 50.0381 0.00440219 0.995184 0 50.1993 GTEX-XMK1-2626-SM-4B65R 1 B1 3 pieces. up to 3x2mm ~30% fibrous tissue, delineated, glands well preserved 8.1 Salivary Gland Minor Salivary Gland 0006330 238 1048 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.98811 574184 0.969956 0.991007 0.790289 25044 1 76 0.00266825 213 0 8.8408e+07 0.0289715 244155 8.92102e+07 8.362e+06 25071 4.39283e+07 0 0.179668 0.991007 0.783182 8.8408e+07 0.00350897 1.94499e+07 1.30205e+07 1.96538e+07 215 1.97435e+07 1.56032e+07 0.00308738 1.96052e+07 49.8242 0.00273685 0.993904 0 50.2607 GTEX-XOT4-0001-SM-4YUX9 C1 Blood Whole Blood 0013756 565 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XOT4-0001-SM-53IVJ C1 Blood Whole Blood 0013756 565 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-XOT4-0001-SM-5URCM C1 Blood Whole Blood 0013756 565 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 LCSET-5270 05/23/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XOT4-0005-SM-4B64S C1 8.7 Blood Whole Blood 0013756 565 BP-31680 RNA isolation_PAXgene Blood RNA (Manual) 10/02/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.972777 689502 0.966567 0.975877 0.778359 19871 1 76 0.00249183 108 0 8.60609e+07 0.0323729 118408 8.81883e+07 8.51086e+06 19884 4.27449e+07 0 0.188208 0.975877 0.759582 8.60609e+07 0.00402482 1.97853e+07 1.2782e+08 1.99917e+07 137 2.00633e+07 2.13013e+07 0.00325589 1.99976e+07 49.918 0.00134267 0.978976 0 50.2595 GTEX-XOT4-0008-SM-4B664 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 640 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989529 765173 0.973517 0.992885 0.862519 22304 1 76 0.00198277 291 0 1.0314e+08 0.0260951 499322 1.03879e+08 1.02572e+07 22321 5.1288e+07 0 0.110998 0.992885 0.856381 1.0314e+08 0.0027363 2.28289e+07 1.90112e+07 2.29095e+07 275 2.30434e+07 2.636e+07 0.00235826 2.30348e+07 49.9906 0.00480676 0.99624 0 50.0881 GTEX-XOT4-0226-SM-4B66Z 1 C1 2 pieces. 9x8 & 9.5x6mm. well fixed; 10% stroma in one 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 643 636 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 TruSeq.v1 RNASEQ 0.988651 659299 0.969499 0.991682 0.795128 24325 1 76 0.00235789 216 0 8.68122e+07 0.0301246 476450 8.75403e+07 8.43596e+06 24359 4.31579e+07 0 0.174372 0.991682 0.788514 8.68122e+07 0.00329682 1.90718e+07 1.18238e+07 1.91237e+07 217 1.91982e+07 1.47379e+07 0.00282592 1.925e+07 50.0674 0.00544263 0.994713 0 50.068 GTEX-XOT4-0326-SM-4B66S 1 C1 2 pieces. 6x3 & 6x2mm; 10% external adipose in 1; none in other 6.4 Nerve Nerve - Tibial 0001323 658 622 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987743 482929 0.959568 0.990724 0.682044 24855 1 76 0.00245752 150 0 7.16141e+07 0.0402194 367635 7.22846e+07 6.50593e+06 24902 3.55816e+07 0 0.277524 0.990724 0.675717 7.16141e+07 0.00336918 1.5659e+07 9.38075e+06 1.57313e+07 153 1.57829e+07 8.61458e+06 0.00291198 1.581e+07 50.043 0.00508594 0.993705 0 50.1151 GTEX-XOT4-0426-SM-4B66T 1 C1 2 pieces. 2x2 & 2.5x2mm; well trimmed of adipose 8.3 Blood Vessel Artery - Tibial 0007610 662 618 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990088 586455 0.971411 0.992403 0.813186 23407 1 76 0.00229686 283 0 1.04056e+08 0.0281774 463598 1.04853e+08 9.77242e+06 23439 5.17734e+07 0 0.158224 0.992403 0.807008 1.04056e+08 0.00303292 2.23229e+07 1.06118e+07 2.24052e+07 290 2.24672e+07 1.96563e+07 0.00266403 2.24889e+07 50.0241 0.00442141 0.994717 0 50.092 GTEX-XOT4-0526-SM-4B66O 1 C1 2 pieces. 11x9 & 9x8mm; well trimmed 7.6 Muscle Muscle - Skeletal 0011907 665 616 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987789 511873 0.979525 0.990876 0.868796 20627 1 76 0.00198336 201 0 9.09005e+07 0.0202373 1.11782e+06 9.17375e+07 8.85696e+06 20641 4.52131e+07 0 0.110729 0.990876 0.860869 9.09005e+07 0.00300195 1.94705e+07 1.14662e+07 1.94926e+07 246 1.95386e+07 1.88458e+07 0.00249107 1.96853e+07 50.187 0.012185 0.993963 0 50.0284 GTEX-XOT4-0626-SM-4B66L 1 C1 6 pieces. up to 8x4mm; focal subcutaneous adipose with embedded sweat glands 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 667 615 BP-33556 RNA isolation_PAXgene Tissue miRNA 11/26/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.983059 537953 0.968756 0.986252 0.788988 23923 1 76 0.00241242 173 0 7.55321e+07 0.0310345 525772 7.6585e+07 7.49526e+06 23948 3.75334e+07 0 0.179768 0.986252 0.778141 7.55321e+07 0.00334883 1.65989e+07 1.25564e+07 1.66186e+07 190 1.66525e+07 1.1128e+07 0.00287911 1.68003e+07 50.2209 0.00686521 0.989445 0 50.0297 GTEX-XOT4-0726-SM-4GIAW 1 C1 2 pieces. 9x8 & 11x7mm; ductal lobular units in one; ducts in other; 40% adipose 7.5 Breast Breast - Mammary Tissue 0008367 675 607 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.987594 541466 0.966618 0.990675 0.734347 25201 1 76 0.00238958 172 0 8.56945e+07 0.0330623 176944 8.65011e+07 8.27704e+06 25249 4.25813e+07 0 0.232271 0.990675 0.727498 8.56945e+07 0.00390022 1.87676e+07 1.06885e+07 1.87889e+07 181 1.88716e+07 1.40118e+07 0.00314255 1.89448e+07 50.0967 0.00204557 0.993756 0 50.0282 GTEX-XOT4-0826-SM-4B66Y 1 C1 2 pieces. 8x6.5 & 9x7.5mm; well fixed 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 677 606 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987884 493968 0.973171 0.99075 0.79986 23681 1 76 0.00240981 169 0 7.81743e+07 0.0264798 281728 7.89041e+07 7.58452e+06 23713 3.88592e+07 0 0.173311 0.99075 0.792461 7.81743e+07 0.00336752 1.71693e+07 1.03893e+07 1.7264e+07 182 1.73236e+07 1.39373e+07 0.00288728 1.73305e+07 50.01 0.00357051 0.993616 0 50.1375 GTEX-XOT4-1126-SM-4B66E 1 C1 2 pieces. 8x7 & 9x7mm; 8 Heart Heart - Atrial Appendage 0006631 686 599 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.985643 1.03043e+06 0.966127 0.989399 0.78155 23690 1 76 0.00228787 270 0 9.97121e+07 0.0335369 1.5386e+06 1.00781e+08 9.88827e+06 23729 4.95395e+07 0 0.184577 0.989399 0.773264 9.97121e+07 0.00316955 2.14739e+07 1.82076e+07 2.15461e+07 279 2.16774e+07 1.71429e+07 0.00272704 2.169e+07 50.0145 0.0152668 0.993154 0 50.0839 GTEX-XOT4-1426-SM-4B65T 2 C1 2 pieces. 8x6.5 & 7x6mm; heart failure cells 7.5 Lung Lung 0008952 684 603 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988181 543361 0.968106 0.990864 0.678999 23565 1 76 0.00268716 126 0 7.34195e+07 0.0315313 356096 7.40965e+07 6.60352e+06 23604 3.64897e+07 0 0.289107 0.990864 0.672795 7.34195e+07 0.00363975 1.62235e+07 1.09595e+07 1.62521e+07 148 1.63214e+07 9.53017e+06 0.00316217 1.63495e+07 50.043 0.00480584 0.993547 0 50.0441 GTEX-XOT4-1526-SM-EAZ2W 1 C1 2 pieces. 8x6 & 9x7mm; well trimmed 5.5 Thyroid Thyroid 0002046 697 592 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.989566 446822 0.960892 0.990265 0.672916 26016 1 76 0.00230349 207 0 9.92986e+07 0.0387977 583939 1.00275e+08 8.22618e+06 26081 4.94755e+07 0 0.287976 0.990265 0.666365 9.92986e+07 0.00296578 2.16579e+07 1.136e+07 2.17599e+07 231 2.17296e+07 1.24818e+07 0.0026344 2.17595e+07 50.0344 0.00582339 0.990964 0 50.1175 GTEX-XOTO-0002-SM-4YUWW C1 Blood Whole Blood 0013756 494 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array EXCLUDE GTEX-XOTO-0002-SM-53IVT C1 Blood Whole Blood 0013756 494 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-XOTO-0002-SM-5URC7 C1 Blood Whole Blood 0013756 494 BP-31683 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/02/2012 LCSET-5270,LCSET-5435 06/16/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-XOTO-0006-SM-4B64T C1 8.2 Blood Whole Blood 0013756 494 BP-31680 RNA isolation_PAXgene Blood RNA (Manual) 10/02/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.956625 777265 0.969731 0.960175 0.784995 18908 1 76 0.00246514 106 0 9.281e+07 0.0285544 172602 9.66595e+07 9.66601e+06 18915 4.60271e+07 0 0.184735 0.960175 0.753732 9.281e+07 0.00433499 2.14414e+07 1.55393e+08 2.16738e+07 140 2.17414e+07 2.38753e+07 0.00339661 2.17348e+07 49.9924 0.00178567 0.963725 0 50.2694 GTEX-XOTO-0008-SM-4GICE C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 593 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3479 07/19/2013 TruSeq.v1 EXCLUDE 0.991868 765832 0.974043 0.99412 0.856711 21175 1 76 0.00201982 220 0 9.79782e+07 0.0256046 336612 9.85577e+07 8.97818e+06 21197 4.87733e+07 0 0.117331 0.99412 0.851674 9.79782e+07 0.00317541 2.17482e+07 1.51413e+07 2.18999e+07 239 2.19772e+07 2.35125e+07 0.0025963 2.18954e+07 49.9067 0.00341538 0.996372 0 50.1739 GTEX-XOTO-0011-R10B-SM-EZ6LM C1, A1 5.7 Brain Brain - Frontal Cortex (BA9) 0009834 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.987994 147270 0.965836 0.989285 0.864309 22524 1 76 0.00228856 279 0 8.20384e+07 0.0339247 7.07314e+06 8.2927e+07 6.33097e+06 22539 4.09009e+07 0 0.101528 0.989285 0.855047 8.20384e+07 0.00306631 1.8068e+07 1.06456e+07 1.8362e+07 301 1.82074e+07 8.35973e+06 0.00267693 1.82907e+07 50.1142 0.0852936 0.990575 0 50.4036 GTEX-XOTO-0011-R11B-SM-4B64O C1, A1 6.8 Brain Brain - Cerebellar Hemisphere 0002037 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.988093 702648 0.950649 0.991169 0.753915 23992 1 76 0.00251763 271 0 9.24713e+07 0.0489039 1.8743e+06 9.32952e+07 8.97152e+06 24033 4.59422e+07 0 0.196733 0.991169 0.747258 9.24713e+07 0.00335701 2.00983e+07 1.89064e+07 2.01973e+07 286 2.02941e+07 1.12155e+07 0.00293602 2.02642e+07 49.9631 0.02009 0.994245 0 50.1229 GTEX-XOTO-0011-R1B-SM-4B65C C1, A1 7.1 Brain Brain - Hippocampus 0001954 503 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.986277 669918 0.9573 0.990138 0.833034 24252 1 76 0.00226127 270 0 8.3687e+07 0.0423591 4.54188e+06 8.45206e+07 7.96416e+06 24275 4.15712e+07 0 0.124266 0.990138 0.824818 8.3687e+07 0.00330297 1.83548e+07 1.83464e+07 1.83721e+07 324 1.83647e+07 9.09251e+06 0.00278009 1.86681e+07 50.4096 0.053737 0.993998 0 50.0236 GTEX-XOTO-0011-R3A-SM-4B64W C1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 503 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.987153 591316 0.961755 0.991078 0.846952 24386 1 76 0.00226066 372 0 9.58863e+07 0.037858 4.30357e+06 9.67495e+07 9.83068e+06 24408 4.76416e+07 0 0.114803 0.991078 0.839396 9.58863e+07 0.0032244 2.08493e+07 1.69154e+07 2.12482e+07 332 2.12656e+07 1.12882e+07 0.00274062 2.11678e+07 49.8848 0.0444816 0.995003 0 50.4737 GTEX-XOTO-0011-R4B-SM-EZ6LL C1, A1 5.8 Brain Brain - Amygdala 0001876 503 BP-34615 RNA isolation_PAXgene Tissue miRNA 12/20/2012 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.987821 270806 0.966336 0.989521 0.842594 23562 1 76 0.00234488 374 0 9.66598e+07 0.0334788 9.35231e+06 9.76834e+07 6.72935e+06 23581 4.81603e+07 0 0.123742 0.989521 0.833764 9.66598e+07 0.003791 2.12758e+07 1.81946e+07 2.16108e+07 338 2.13751e+07 7.73824e+06 0.0030667 2.16269e+07 50.2928 0.095741 0.99122 0 50.3906 GTEX-XOTO-0011-R5A-SM-4B657 C1, A1 6.9 Brain Brain - Caudate (basal ganglia) 0001873 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.989785 617990 0.96339 0.992581 0.837129 24752 1 76 0.00226748 269 0 1.08814e+08 0.0363721 8.74856e+06 1.09627e+08 1.11912e+07 24779 5.41452e+07 0 0.126261 0.992581 0.830919 1.08814e+08 0.00306836 2.36804e+07 2.96437e+07 2.4032e+07 323 2.37714e+07 9.57912e+06 0.00266679 2.42162e+07 50.4634 0.0798031 0.995377 0 50.3685 GTEX-XOTO-0011-R6B-SM-4B65X C1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.987719 433552 0.96483 0.990633 0.841645 23254 1 76 0.00227066 267 0 7.49093e+07 0.0349613 5.88835e+06 7.56176e+07 7.05409e+06 23269 3.72503e+07 0 0.123185 0.990633 0.833761 7.49093e+07 0.0032228 1.64849e+07 1.53811e+07 1.65379e+07 303 1.64259e+07 6.4654e+06 0.00274533 1.67915e+07 50.5502 0.07787 0.993546 0 50.0802 GTEX-XOTO-0011-R7B-SM-4B64R C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.989183 479635 0.965625 0.992422 0.841209 24128 1 76 0.00224067 269 0 1.00128e+08 0.0341385 7.07417e+06 1.00893e+08 1.01137e+07 24146 4.98015e+07 0 0.124416 0.992422 0.834834 1.00128e+08 0.00316484 2.1973e+07 2.33783e+07 2.21318e+07 326 2.20438e+07 8.97487e+06 0.00270125 2.23514e+07 50.3464 0.0701157 0.99566 0 50.18 GTEX-XOTO-0011-R8A-SM-4B65J C1, A1 6.4 Brain Brain - Hypothalamus 0001898 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.984823 526385 0.965275 0.988718 0.837847 24863 1 76 0.00233676 274 0 1.02679e+08 0.0344357 6.94791e+06 1.03851e+08 1.06889e+07 24887 5.10222e+07 0 0.127428 0.988718 0.828394 1.02679e+08 0.0032245 2.25147e+07 1.83848e+07 2.29484e+07 328 2.29432e+07 1.03959e+07 0.00277888 2.28714e+07 49.9216 0.0669027 0.992612 0 50.477 GTEX-XOTO-0011-R9A-SM-4GICI C1, A1 6.5 Brain Brain - Spinal cord (cervical c-1) 0006469 503 BP-34648 RNA isolation_PAXgene Tissue miRNA 12/21/2012 LCSET-3479 07/19/2013 TruSeq.v1 EXCLUDE 0.987661 354724 0.967698 0.990839 0.847867 22242 1 76 0.00223931 277 0 7.4503e+07 0.032053 5.36086e+06 7.51918e+07 7.60993e+06 22262 3.70369e+07 0 0.11983 0.990839 0.8401 7.4503e+07 0.00354804 1.65798e+07 1.3433e+07 1.67844e+07 273 1.66183e+07 7.05828e+06 0.00289158 1.69651e+07 50.5164 0.0712958 0.994018 0 50.3065 GTEX-XOTO-0126-SM-4B66N 0 C1 6 pieces. up to 8x3mm; squamous epithelium is ~2-3% thickness 8.1 Skin Skin - Sun Exposed (Lower leg) 0004264 592 1238 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.983897 631489 0.966368 0.987202 0.787756 23633 1 76 0.00249523 181 0 7.75945e+07 0.033398 500735 7.86004e+07 7.76914e+06 23662 3.85551e+07 0 0.178612 0.987202 0.777674 7.75945e+07 0.00344702 1.69221e+07 1.50048e+07 1.70287e+07 182 1.70864e+07 1.28139e+07 0.00296953 1.71166e+07 50.0441 0.00637064 0.990507 0 50.1571 GTEX-XOTO-0226-SM-4B66H 0 C1 2 pieces. 9x7 & 9x8mm; ~10% fibrous components, delineated 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 595 1235 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.988751 495673 0.971141 0.991783 0.775819 24115 1 76 0.00236829 210 0 8.57545e+07 0.0285584 237098 8.6465e+07 8.08453e+06 24152 4.26369e+07 0 0.195323 0.991783 0.769444 8.57545e+07 0.00330828 1.87889e+07 1.00566e+07 1.8861e+07 204 1.89465e+07 1.43144e+07 0.00283685 1.89558e+07 50.0123 0.00274213 0.994815 0 50.0958 GTEX-XOTO-0326-SM-4B66K 0 C1 2 pieces. 5x3 & 5x3mm; discontinuous adherent fat ~0.5mm, delineated 7.2 Nerve Nerve - Tibial 0001323 610 1221 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.985857 461830 0.963556 0.989485 0.748572 24579 1 76 0.00243539 175 0 8.02129e+07 0.036191 372738 8.10653e+07 8.00727e+06 24616 3.98514e+07 0 0.214984 0.989485 0.7407 8.02129e+07 0.00361697 1.75618e+07 9.11441e+06 1.7631e+07 190 1.77065e+07 1.12587e+07 0.00302401 1.77641e+07 50.0811 0.004598 0.993112 0 50.0983 GTEX-XOTO-0426-SM-4B66A 0 C1 2 pieces. 3x2 & 3x2mm; atherosclerotic occlusion ~60-70% of lumen 7.1 Blood Vessel Artery - Tibial 0007610 614 1217 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.984573 515815 0.969068 0.98802 0.77719 23436 1 76 0.00249041 274 0 9.80465e+07 0.0306399 535861 9.92353e+07 9.73758e+06 23477 4.8725e+07 0 0.191879 0.98802 0.767879 9.80465e+07 0.00325678 2.10025e+07 1.05107e+07 2.12397e+07 285 2.12956e+07 1.50184e+07 0.00287226 2.12587e+07 49.9567 0.0053999 0.991467 0 50.2807 GTEX-XOTO-0526-SM-4B662 0 C1 2 pieces. 9x6 & 8x7mm; focal adipose tissue delineated (~5% tissue) 8.6 Muscle Muscle - Skeletal 0011907 616 1216 BP-33606 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.988441 877273 0.980651 0.991898 0.86627 21727 1 76 0.00204278 272 0 1.14888e+08 0.0190458 850844 1.15826e+08 1.1281e+07 21745 5.71238e+07 0 0.114381 0.991898 0.859251 1.14888e+08 0.0029353 2.5229e+07 1.52206e+07 2.52958e+07 306 2.54348e+07 2.45671e+07 0.00248749 2.5457e+07 50.0218 0.00734586 0.995354 0 50.0661 GTEX-XOTO-0626-SM-EYYVN 2 C1 2 pieces. 7x5 & 9x7mm; spermatogenesiis present but poorly preserved 5.6 Testis Testis 0000473 619 1213 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.984483 256407 0.915451 0.988363 0.691481 34542 1 76 0.00231305 218 0 9.75916e+07 0.0842498 1.20463e+06 9.87407e+07 3.69234e+06 34618 4.85086e+07 0 0.22397 0.988363 0.683434 9.75916e+07 0.00334789 1.98055e+07 1.46109e+07 1.99605e+07 253 2.00634e+07 1.34192e+07 0.00282844 2.00286e+07 49.9566 0.0122 0.992243 0 50.1948 GTEX-XOTO-0726-SM-4B659 0 C1 6 pieces. up to 7.5x3mm; squamous epithelium is ~4-5% thickness 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 646 1187 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.986171 584837 0.96724 0.989656 0.775242 23629 1 76 0.00246789 177 0 7.66899e+07 0.0325528 588126 7.74915e+07 7.51519e+06 23657 3.81074e+07 0 0.191998 0.989656 0.767223 7.66899e+07 0.00350193 1.67343e+07 1.40912e+07 1.67731e+07 179 1.68517e+07 1.20082e+07 0.00298309 1.6917e+07 50.0966 0.00758955 0.993141 0 50.0579 GTEX-XOTO-0826-SM-4B65O 1 C1 2 pieces. 9x8 & 10x8mm; minimal steatosis 7.3 Liver Liver 0001114 658 1175 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.989132 642748 0.973246 0.991983 0.805966 21888 1 76 0.00224196 199 0 8.77152e+07 0.0266226 1.0344e+06 8.8424e+07 8.2438e+06 21909 4.3628e+07 0 0.16728 0.991983 0.799505 8.77152e+07 0.00315097 1.90165e+07 1.59336e+07 1.89762e+07 245 1.90285e+07 1.41002e+07 0.00269516 1.9197e+07 50.2203 0.0116981 0.994834 0 49.947 GTEX-XOTO-2126-SM-4B64U 1 C1 6 pieces. up to 6x2mm; squamous mucosa is ~10% thickness. 7.1 Esophagus Esophagus - Mucosa 0006920 696 1145 BP-33723 RNA isolation_PAXgene Tissue miRNA 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.988745 459239 0.971009 0.991402 0.795702 22249 1 76 0.00238769 160 0 7.80638e+07 0.0287663 320124 7.87408e+07 7.37921e+06 22268 3.88351e+07 0 0.175307 0.991402 0.788861 7.80638e+07 0.00336121 1.74584e+07 1.25348e+07 1.75321e+07 189 1.75654e+07 1.24383e+07 0.00287314 1.76312e+07 50.0934 0.00406554 0.994059 0 50.1053 GTEX-XOTO-2826-SM-4B65I 2 C1 2 pieces. 8.5x8 & 10x8mm; glands moderately autolyzed; one better preserved (~grade 1) area delineated 6.8 Prostate Prostate 0002367 715 1135 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.978521 395881 0.960524 0.982786 0.731424 24278 1 76 0.00252775 133 0 6.74098e+07 0.0392231 866785 6.85905e+07 6.7467e+06 24309 3.34592e+07 0 0.2291 0.982786 0.718833 6.74098e+07 0.00360552 1.47786e+07 1.25805e+07 1.49125e+07 157 1.49936e+07 7.84242e+06 0.0030643 1.49783e+07 49.9744 0.0126371 0.987051 0 50.2256 GTEX-XOTO-2926-SM-4B65G 1 C1 4 pieces. up to 6x4mm; Purkinje cells well visualized, minimal ischemic changes 6.9 Brain Brain - Cerebellum 0002037 718 1132 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.988339 733280 0.946102 0.991045 0.73821 24881 1 76 0.00259722 270 0 1.02428e+08 0.0535694 2.15183e+06 1.03354e+08 1.00443e+07 24917 5.09353e+07 0 0.207892 0.991045 0.731599 1.02428e+08 0.00344013 2.22111e+07 2.88662e+07 2.23645e+07 302 2.2426e+07 1.08064e+07 0.00301752 2.24065e+07 49.9782 0.0208201 0.993751 0 50.1721 GTEX-XOTO-3026-SM-4B65M 1 C1 4 pieces. up to 6x6mm; 7.1 Brain Brain - Cortex 0001870 721 1130 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 EXCLUDE 0.98952 753158 0.959209 0.992458 0.819394 25290 1 76 0.00231098 272 0 1.07506e+08 0.0404032 4.03465e+06 1.08323e+08 1.07498e+07 25314 5.3475e+07 0 0.139815 0.992458 0.813214 1.07506e+08 0.00322432 2.35479e+07 2.24516e+07 2.36763e+07 322 2.37091e+07 1.2878e+07 0.0027663 2.38088e+07 50.105 0.0372465 0.995396 0 50.1359 GTEX-XPT6-0001-SM-4B64G B1 9.7 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -41 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988884 1.09001e+06 0.955586 0.991852 0.777646 21069 1 76 0.00248333 140 0 7.2545e+07 0.0439551 499428 7.3141e+07 6.70646e+06 21091 3.60512e+07 0 0.17794 0.991852 0.77131 7.2545e+07 0.00343797 1.59107e+07 2.04529e+07 1.60522e+07 140 1.6143e+07 1.61273e+07 0.00295922 1.60355e+07 49.8329 0.00682829 0.99482 0 50.2213 GTEX-XPT6-0004-SM-4YUXL B1 Blood Whole Blood 0013756 -41 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XPT6-0004-SM-53IVP B1 Blood Whole Blood 0013756 -41 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-XPT6-0004-SM-5URDL B1 Blood Whole Blood 0013756 -41 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 LCSET-5270,LCSET-5436 05/03/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XPT6-0006-SM-4B66Q B1 9 Blood Whole Blood 0013756 -41 BP-31810 RNA isolation_PAXgene Blood RNA (Manual) 10/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.975547 1.20643e+06 0.953231 0.97876 0.793314 19353 1 76 0.00229979 121 0 8.50718e+07 0.0456363 308188 8.6918e+07 8.65618e+06 19363 4.22172e+07 0 0.159918 0.97876 0.776464 8.50718e+07 0.00352665 1.88925e+07 9.01447e+07 1.90264e+07 150 1.90922e+07 1.97274e+07 0.0029112 1.91217e+07 50.0385 0.00354573 0.981974 0 50.1766 GTEX-XPT6-0008-SM-4B64Q B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 250 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.991115 703077 0.974663 0.993825 0.854137 21818 1 76 0.00202749 290 0 1.08306e+08 0.0249627 367944 1.08979e+08 9.92252e+06 21838 5.38978e+07 0 0.120526 0.993825 0.848863 1.08306e+08 0.00287411 2.40725e+07 1.85982e+07 2.42299e+07 282 2.43402e+07 2.77107e+07 0.00244964 2.42487e+07 49.9059 0.00337629 0.996535 0 50.1629 GTEX-XPT6-0126-SM-4B65S 1 B1 2 pieces ~9x6mm. No ischemic changes 7.9 Heart Heart - Left Ventricle 0006566 184 843 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990402 644953 0.983217 0.99323 0.865472 21834 1 76 0.0025174 271 0 1.3553e+08 0.0165762 3.03878e+06 1.36453e+08 1.39236e+07 21854 6.74515e+07 0 0.117745 0.99323 0.859613 1.3553e+08 0.00317656 2.98376e+07 3.08933e+07 2.99362e+07 313 2.97338e+07 2.04096e+07 0.00284604 3.03663e+07 50.5262 0.0222697 0.996059 0 50.0825 GTEX-XPT6-0226-SM-4B65L 1 B1 2 pieces ~9x7mm 8.4 Heart Heart - Atrial Appendage 0006631 186 842 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.9901 658992 0.974621 0.992868 0.847721 22851 1 76 0.00244474 267 0 1.04251e+08 0.0251122 2.08653e+06 1.05e+08 1.04279e+07 22868 5.18743e+07 0 0.1269 0.992868 0.841675 1.04251e+08 0.00325153 2.25631e+07 1.78045e+07 2.29257e+07 320 2.27661e+07 1.601e+07 0.00284701 2.29814e+07 50.2353 0.0198717 0.995636 0 50.3986 GTEX-XPT6-0326-SM-4B66V 1 B1 6 pieces, ~9x2mm, 4 of 6 with adherent fat/vasa vasorum up to 2mm thick 7.6 Blood Vessel Artery - Aorta 0001496 191 837 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990635 625111 0.968596 0.993335 0.806265 24137 1 76 0.00231595 276 0 1.03709e+08 0.0311013 414231 1.04404e+08 1.04699e+07 24169 5.15973e+07 0 0.162331 0.993335 0.800891 1.03709e+08 0.00311857 2.23482e+07 1.17636e+07 2.25447e+07 296 2.25909e+07 1.81043e+07 0.00271617 2.25657e+07 49.972 0.00396756 0.996035 0 50.2189 GTEX-XPT6-0426-SM-4B672 1 B1 2 pieces, one distorted ~3mm d with adherent nubbins fat/fibrous tissue up to 2x5mm 7.9 Blood Vessel Artery - Coronary 0001621 194 834 BP-33639 RNA isolation_PAXgene Tissue miRNA 11/27/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990775 807994 0.968267 0.99304 0.815362 24000 1 76 0.00235689 276 0 1.07505e+08 0.0313864 511308 1.08259e+08 1.00032e+07 24030 5.35011e+07 0 0.152905 0.99304 0.809686 1.07505e+08 0.00313428 2.31072e+07 1.3392e+07 2.32403e+07 296 2.32697e+07 2.01506e+07 0.0027447 2.33151e+07 50.0487 0.00472302 0.995304 0 50.1436 GTEX-XPT6-1626-SM-4B655 1 B1 2 pieces /'9x6mm, spermatogenesis is present 6.2 Testis Testis 0000473 233 800 BP-33723 RNA isolation_PAXgene Tissue miRNA 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.986841 725290 0.929634 0.990389 0.742573 34538 1 76 0.00248257 280 0 1.15729e+08 0.0700924 1.42687e+06 1.16852e+08 1.1773e+07 34618 5.75312e+07 0 0.187061 0.990389 0.735435 1.15729e+08 0.00353715 2.41199e+07 2.25466e+07 2.42982e+07 309 2.4429e+07 1.73524e+07 0.00300797 2.43577e+07 49.9269 0.0122109 0.993937 0 50.1841 GTEX-XPT6-2026-SM-4B64V 0 B1 2 pieces~7x5mm, minimal fat 8.9 Muscle Muscle - Skeletal 0011907 254 781 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990709 877352 0.974789 0.993217 0.868725 20671 1 76 0.00230617 288 0 1.02114e+08 0.0249858 744899 1.02811e+08 9.64809e+06 20681 5.08247e+07 0 0.106064 0.993217 0.862833 1.02114e+08 0.00309829 2.24777e+07 1.98272e+07 2.25216e+07 315 2.25536e+07 1.99216e+07 0.00270123 2.26896e+07 50.1502 0.00724532 0.995726 0 50.0488 GTEX-XPT6-2126-SM-4B66P 0 B1 2 pieces ~4mm d. Minimal adherent rim of fat on one, delineated, ~0.5mm 8.2 Nerve Nerve - Tibial 0001323 260 776 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988546 776568 0.963431 0.991454 0.756037 24921 1 76 0.00242489 223 0 9.21098e+07 0.0362625 298949 9.29038e+07 8.87668e+06 24970 4.57978e+07 0 0.207394 0.991454 0.749576 9.21098e+07 0.00327155 2.01137e+07 1.33566e+07 2.02093e+07 219 2.02955e+07 1.54404e+07 0.00284698 2.02879e+07 49.9907 0.00321783 0.994362 0 50.1186 GTEX-XPT6-2226-SM-4B66R 0 B1 2 pieces ~3mm d. Clean specimens. 8.9 Blood Vessel Artery - Tibial 0007610 261 775 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987832 749849 0.96853 0.991207 0.816063 22484 1 76 0.00238469 281 0 9.80563e+07 0.0310307 418386 9.89262e+07 1.005e+07 22512 4.87252e+07 0 0.152468 0.991207 0.808887 9.80563e+07 0.00330613 2.07033e+07 1.20573e+07 2.08886e+07 266 2.09744e+07 1.90249e+07 0.00284384 2.09332e+07 49.9509 0.00422928 0.994582 0 50.2228 GTEX-XPVG-0003-SM-4YUWK B1 Blood Whole Blood 0013756 -161 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XPVG-0003-SM-53IV7 B1 Blood Whole Blood 0013756 -161 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XPVG-0003-SM-6UH19 B1 Blood Whole Blood 0013756 -161 BP-31799 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/04/2012 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-XPVG-0006-SM-4B65Z B1 8.9 Blood Whole Blood 0013756 -161 BP-31810 RNA isolation_PAXgene Blood RNA (Manual) 10/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.963052 905079 0.962788 0.966355 0.801216 18194 1 76 0.0024413 106 0 8.98794e+07 0.0352658 173623 9.30087e+07 9.46464e+06 18201 4.45704e+07 0 0.161572 0.966355 0.774259 8.98794e+07 0.00399916 2.07048e+07 1.38723e+08 2.09077e+07 142 2.09792e+07 2.33679e+07 0.00321756 2.09676e+07 49.9862 0.00186674 0.969658 0 50.2438 GTEX-XPVG-0008-SM-4GICH B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 223 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.990853 627116 0.977594 0.993618 0.866455 20554 1 76 0.00198188 178 0 8.73576e+07 0.0221009 440783 8.79188e+07 8.25024e+06 20571 4.34667e+07 0 0.111139 0.993618 0.860925 8.73576e+07 0.00323892 1.95805e+07 1.2082e+07 1.96851e+07 191 1.97782e+07 2.18971e+07 0.00260865 1.9731e+07 49.9403 0.00501353 0.996382 0 50.1332 GTEX-XPVG-0226-SM-EVYAQ 1 B1 6 pieces, up to 10x2.5mm; well trimmed, no plaques 5.5 Blood Vessel Artery - Aorta 0001496 60 1075 BP-33723 RNA isolation_PAXgene Tissue miRNA 11/29/2012 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.989313 391671 0.970716 0.989882 0.838065 22009 1 76 0.00178816 207 0 8.61018e+07 0.0290295 308563 8.69819e+07 3.46913e+06 22031 4.29254e+07 0 0.132651 0.989882 0.829586 8.61018e+07 0.00302757 1.84186e+07 7.25783e+06 1.86093e+07 252 1.84653e+07 1.43117e+07 0.00240751 1.86185e+07 50.2066 0.00354744 0.990451 0 50.2575 GTEX-XPVG-0326-SM-4B653 1 B1 2 pieces, 11x10 & 10x8.5mm; 20-40% external adipose up to 2.6 mm thick 7.5 Pancreas Pancreas 0001150 67 1068 BP-33723 RNA isolation_PAXgene Tissue miRNA 11/29/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.98893 539985 0.968471 0.991847 0.821415 22444 1 76 0.00241658 128 0 8.52768e+07 0.0311886 265438 8.59778e+07 8.21184e+06 22464 4.24186e+07 0 0.147056 0.991847 0.814718 8.52768e+07 0.00333064 1.92374e+07 2.37729e+07 1.94858e+07 143 1.95432e+07 2.29248e+07 0.00287226 1.94297e+07 49.8544 0.00308729 0.994764 0 50.3208 GTEX-XPVG-0526-SM-4B65N 1 B1 6 pieces, up to 9.5x2mm; all cortex 7.9 Kidney Kidney - Cortex 0001225 86 1049 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988193 594120 0.966602 0.991434 0.789539 25208 1 76 0.00228662 269 0 9.75839e+07 0.0331717 1.90809e+06 9.8427e+07 9.62046e+06 25240 4.85309e+07 0 0.177064 0.991434 0.782775 9.75839e+07 0.0033329 2.14632e+07 1.58705e+07 2.14974e+07 311 2.15407e+07 1.3413e+07 0.00280805 2.17193e+07 50.2064 0.0193859 0.994675 0 50.0398 GTEX-XPVG-0626-SM-4B65B 1 B1 2 pieces, 12x10mm; & 11x9mm; moderate congestion 8.8 Spleen Spleen 0002106 88 1047 BP-33777 RNA isolation_PAXgene Tissue miRNA 11/30/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988939 871003 0.956945 0.991593 0.712583 25795 1 76 0.00255112 207 0 9.68306e+07 0.0427473 470829 9.76515e+07 9.30038e+06 25845 4.81644e+07 0 0.244362 0.991593 0.706593 9.68306e+07 0.00340224 2.11156e+07 2.03796e+07 2.12202e+07 219 2.13294e+07 1.49859e+07 0.00297554 2.1261e+07 49.9197 0.00482152 0.994247 0 50.1235 GTEX-XPVG-0726-SM-4B658 1 B1 2 pieces, 9x6 & 8x5mm; hypertrophic fibers; 20% internal adipose 8 Heart Heart - Atrial Appendage 0006631 93 1042 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990739 590022 0.975655 0.993433 0.849042 22116 1 76 0.0020554 266 0 9.84481e+07 0.0241329 1.62822e+06 9.90989e+07 9.27157e+06 22133 4.89962e+07 0 0.126613 0.993433 0.843467 9.84481e+07 0.00299194 2.10435e+07 1.73602e+07 2.1129e+07 325 2.09932e+07 1.43862e+07 0.0025224 2.14142e+07 50.4964 0.0164303 0.996126 0 50.1014 GTEX-XPVG-0826-SM-4B654 1 B1 2 pieces, 18x13 & 21.5x6mm; hypertrophic fibers; 2 mm adipose at one end of 1 piece 8.3 Heart Heart - Left Ventricle 0006566 98 1037 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.991248 519824 0.982427 0.993815 0.853131 21398 1 76 0.002052 267 0 1.17008e+08 0.0173827 2.77673e+06 1.17737e+08 1.14599e+07 21411 5.82465e+07 0 0.129296 0.993815 0.847854 1.17008e+08 0.00283366 2.56966e+07 2.90244e+07 2.55264e+07 317 2.53271e+07 1.62945e+07 0.00244182 2.61767e+07 50.8248 0.0235843 0.996383 0 49.8339 GTEX-XPVG-0926-SM-4B651 1 B1 2 pieces. 3x3 & 4x2.5mm; well trimmed; 1 with large, 1mm, eccentric plaque; 1 with 0.3 mm adventitial adipose 8 Blood Vessel Artery - Coronary 0001621 111 1024 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988447 641125 0.965873 0.991758 0.808537 22921 1 76 0.00227611 279 0 1.04156e+08 0.0337632 455507 1.05022e+08 1.02058e+07 22955 5.17928e+07 0 0.157335 0.991758 0.801873 1.04156e+08 0.00313685 2.21931e+07 1.4105e+07 2.23147e+07 295 2.24082e+07 1.93085e+07 0.00270504 2.2425e+07 50.0188 0.00433726 0.995068 0 50.1366 GTEX-XPVG-1026-SM-4B64Y 1 B1 2 pieces, 8.5x5.5 & 7x6mm; 1 piece has pleura (tissue should be sampled >1 cm beneath pleura) 8.9 Lung Lung 0008952 115 1020 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.983083 692735 0.969429 0.985278 0.794695 24829 1 76 0.00252052 275 0 1.04259e+08 0.0300876 492483 1.05816e+08 9.26261e+06 24865 5.18736e+07 0 0.174734 0.985278 0.782996 1.04259e+08 0.00321661 2.30597e+07 1.44212e+07 2.31403e+07 293 2.32125e+07 1.88195e+07 0.00286779 2.3209e+07 49.9962 0.00465413 0.987474 0 50.0873 GTEX-XPVG-1326-SM-4B65P 1 B1 6 pieces, up to 9x3.5mm; all with muscle (target) , 2 with mucosal remnants 7.5 Esophagus Esophagus - Muscularis 0004648 131 1004 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.98868 601829 0.969428 0.991613 0.803357 22813 1 76 0.00221269 208 0 8.17191e+07 0.0303765 720082 8.24102e+07 7.92108e+06 22840 4.06313e+07 0 0.166071 0.991613 0.79662 8.17191e+07 0.00320636 1.77631e+07 1.04396e+07 1.78332e+07 219 1.77983e+07 1.19778e+07 0.00270806 1.80311e+07 50.3249 0.00873778 0.994547 0 50.0984 GTEX-XPVG-1426-SM-4B668 1 B1 6 pieces, up to 10x5mm; all with (target) muscle 6.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 136 999 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989532 472503 0.970815 0.992001 0.820825 22788 1 76 0.00222797 273 0 8.93722e+07 0.0289887 853178 9.00928e+07 8.4613e+06 22811 4.44762e+07 0 0.14999 0.992001 0.81426 8.93722e+07 0.00306804 1.9396e+07 1.03867e+07 1.94963e+07 300 1.94419e+07 1.32987e+07 0.00264696 1.96596e+07 50.2783 0.00946999 0.994471 0 50.1289 GTEX-XPVG-1526-SM-4B66C 1 B1 6 pieces, up to 8x4mm; only 2 with mucosa, 4 with muscularis propria only 7.6 Stomach Stomach 0000945 146 989 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988398 544337 0.973594 0.99182 0.829411 23127 1 76 0.00217325 275 0 9.3484e+07 0.0261391 671551 9.4255e+07 9.16288e+06 23150 4.64787e+07 0 0.144183 0.99182 0.822627 9.3484e+07 0.00307568 2.02238e+07 1.01904e+07 2.03705e+07 288 2.04248e+07 1.61022e+07 0.00262291 2.04704e+07 50.0558 0.00712483 0.995243 0 50.1806 GTEX-XPVG-1626-SM-EYYVK 0 B1 2 pieces, 18x10 & 15x9mm; 5.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 149 986 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985386 158378 0.978353 0.988778 0.856727 21920 1 76 0.00205061 272 0 7.94314e+07 0.021391 890514 8.03329e+07 3.00712e+06 21933 3.95042e+07 0 0.121626 0.988778 0.847113 7.94314e+07 0.00359814 1.73911e+07 7.41609e+06 1.75784e+07 261 1.75687e+07 1.27122e+07 0.00282172 1.76472e+07 50.1115 0.0110853 0.99217 0 50.2678 GTEX-XPVG-1726-SM-4B65W 1 B1 6 pieces, up to 6x6mm; 3 small mucosal lymphoid nodules; well preserved mucosa 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 156 979 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989703 479096 0.970961 0.992345 0.80752 23322 1 76 0.00223231 206 0 8.48826e+07 0.0287829 548184 8.55374e+07 8.03746e+06 23352 4.22363e+07 0 0.163441 0.992345 0.801338 8.48826e+07 0.0031673 1.833e+07 9.96896e+06 1.84669e+07 230 1.84809e+07 1.38756e+07 0.00269856 1.85263e+07 50.0613 0.00640871 0.994987 0 50.1861 GTEX-XPVG-1826-SM-4B64X 1 B1 6 pieces, up to 11x4mm; 3 with good mucosa; 4 with muscularis; 1 with only adipose 6.6 Colon Colon - Transverse 0001157 171 964 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.986049 549537 0.969282 0.989734 0.793366 23675 1 76 0.00238077 274 0 8.85915e+07 0.0303549 1.44633e+06 8.95104e+07 8.30538e+06 23712 4.40145e+07 0 0.175916 0.989734 0.785222 8.85915e+07 0.0033052 1.96526e+07 1.40391e+07 1.97785e+07 298 1.98013e+07 1.10279e+07 0.00284126 1.99202e+07 50.1497 0.0161582 0.99342 0 50.1596 GTEX-XPVG-2026-SM-4B65E 1 B1 2 pieces. 7x7 & 11x5mm; well preserved glands; 1 piece with 2 mm focus of ganglion cells; 1 with 1mm external adipose 8.3 Prostate Prostate 0002367 187 948 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987544 848698 0.96537 0.991032 0.757463 25351 1 76 0.00236683 207 0 9.65257e+07 0.034374 359010 9.73992e+07 9.75484e+06 25394 4.79717e+07 0 0.207907 0.991032 0.75067 9.65257e+07 0.00324898 2.0896e+07 1.45751e+07 2.10126e+07 237 2.11253e+07 1.64879e+07 0.00280635 2.11058e+07 49.9769 0.00368596 0.994519 0 50.1392 GTEX-XPVG-2126-SM-4B667 0 B1 6 pieces, up to 7x4mm; well trimmed 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 194 941 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.986117 454639 0.962122 0.988811 0.776721 23522 1 76 0.00237373 147 0 6.62619e+07 0.0377398 602015 6.70116e+07 6.30009e+06 23548 3.29555e+07 0 0.185401 0.988811 0.76803 6.62619e+07 0.00339838 1.44462e+07 1.12137e+07 1.45393e+07 164 1.45212e+07 8.82602e+06 0.00288465 1.46413e+07 50.2058 0.00898374 0.991505 0 50.1605 GTEX-XPVG-2226-SM-4B65U 1 B1 2 pieces, 12x9 7 11x7mm; spermatogenesis 7.4 Testis Testis 0000473 201 934 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.987319 1.03633e+06 0.930806 0.9904 0.732838 33060 1 76 0.00238899 209 0 9.80404e+07 0.0689333 1.26049e+06 9.89907e+07 9.52928e+06 33128 4.87543e+07 0 0.197967 0.9904 0.725803 9.80404e+07 0.0032908 2.06648e+07 2.57562e+07 2.07093e+07 255 2.08162e+07 1.46639e+07 0.00283849 2.08393e+07 50.0278 0.0127334 0.993481 0 50.0537 GTEX-XPVG-2526-SM-4B66D 0 B1 2 pieces. 14x9 & 12.5x9mm; Well trimmed, no adipose 7.9 Muscle Muscle - Skeletal 0011907 217 918 BP-34001 RNA isolation_PAXgene Tissue miRNA 12/06/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.990284 562093 0.979382 0.993298 0.865511 22039 1 76 0.00207353 282 0 1.17662e+08 0.0204318 1.5937e+06 1.18456e+08 1.14829e+07 22055 5.85499e+07 0 0.113871 0.993298 0.85971 1.17662e+08 0.00290057 2.59463e+07 2.15632e+07 2.60061e+07 321 2.59675e+07 1.9502e+07 0.00248579 2.63062e+07 50.324 0.0134539 0.996311 0 50.0575 GTEX-XPVG-2626-SM-4B669 1 B1 6 pieces. up to 5x4.5mm; well trimmed 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 221 914 BP-34001 RNA isolation_PAXgene Tissue miRNA 12/06/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.984645 658897 0.970093 0.989076 0.779269 24158 1 76 0.00234458 228 0 8.93984e+07 0.0297081 729398 9.03857e+07 9.22999e+06 24185 4.43924e+07 0 0.190825 0.989076 0.770756 8.93984e+07 0.00344809 1.95352e+07 1.23761e+07 1.96478e+07 236 1.97437e+07 1.41659e+07 0.00289386 1.98171e+07 50.0928 0.00806984 0.993508 0 50.1436 GTEX-XPVG-2726-SM-4B66W 0 B1 2 pieces. 10x8 & 12x5mm; 1 with 20% fibrous tissue 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 222 913 BP-34001 RNA isolation_PAXgene Tissue miRNA 12/06/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989247 426100 0.975539 0.992224 0.836093 22655 1 76 0.00225863 208 0 7.73725e+07 0.0241822 976832 7.79789e+07 7.49678e+06 22674 3.84792e+07 0 0.139446 0.992224 0.829591 7.73725e+07 0.00315448 1.70656e+07 8.89246e+06 1.71207e+07 223 1.71309e+07 1.18774e+07 0.00270521 1.72772e+07 50.2126 0.0125269 0.995201 0 50.0806 GTEX-XPVG-2826-SM-4B66J 1 B1 2 pieces. 4x4 & 6x5mm; well trimmed, but with 20% internal fibroadipose 6.4 Nerve Nerve - Tibial 0001323 227 908 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988273 543439 0.961623 0.991141 0.734561 24537 1 76 0.00239506 173 0 8.0931e+07 0.0381416 407249 8.16543e+07 7.26014e+06 24574 4.02382e+07 0 0.227061 0.991141 0.728054 8.0931e+07 0.00320776 1.76926e+07 9.81606e+06 1.77871e+07 189 1.78414e+07 1.12401e+07 0.00280023 1.78623e+07 50.0294 0.00498748 0.994009 0 50.1331 GTEX-XPVG-2926-SM-4B66G 0 B1 2 pieces. 5x5 & 7x5mm; Well trimmed, slight plaque, minute calcification 6.7 Blood Vessel Artery - Tibial 0007610 233 902 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.988341 582264 0.96753 0.99179 0.806827 22662 1 76 0.00229863 211 0 8.76422e+07 0.0321408 275441 8.83678e+07 8.3609e+06 22679 4.35508e+07 0 0.160703 0.99179 0.800203 8.76422e+07 0.00326658 1.87562e+07 1.06173e+07 1.88769e+07 221 1.89284e+07 1.57358e+07 0.00278092 1.89944e+07 50.0869 0.00311698 0.995239 0 50.1603 GTEX-XQ3S-0001-SM-4B64K C1 9.2 Blood Cells - EBV-transformed lymphocytes EFO_0000572 697 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3141 05/13/2013 TruSeq.v1 RNASEQ 0.989218 1.3482e+06 0.954156 0.992209 0.773565 23516 1 76 0.00232327 288 0 1.18915e+08 0.0454361 749772 1.19849e+08 1.20883e+07 23564 5.91345e+07 0 0.180591 0.992209 0.767539 1.18915e+08 0.0030871 2.59921e+07 3.8157e+07 2.62875e+07 282 2.64633e+07 2.64711e+07 0.00270404 2.61621e+07 49.7138 0.00625597 0.995201 0 50.2825 GTEX-XQ3S-0002-SM-4YUWE C1 Blood Whole Blood 0013756 697 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XQ3S-0002-SM-53IVU C1 Blood Whole Blood 0013756 697 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-XQ3S-0002-SM-5JK42 C1 Blood Whole Blood 0013756 697 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XQ3S-0006-SM-4BOQ4 C1 6.7 Blood Whole Blood 0013756 697 BP-32111 RNA isolation_PAXgene Blood RNA (Manual) 10/12/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.985702 1.43067e+06 0.925777 0.987852 0.747312 18088 1 76 0.00234576 108 0 6.58419e+07 0.0734203 317651 6.66516e+07 4.25323e+06 18098 3.27279e+07 0 0.178466 0.987852 0.738233 6.58419e+07 0.00328966 1.40928e+07 8.01943e+07 1.43683e+07 122 1.43663e+07 1.28086e+07 0.00281669 1.42615e+07 49.817 0.00476584 0.990001 0 50.4841 GTEX-XQ3S-0008-SM-4GIDZ C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 895 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3479 07/19/2013 TruSeq.v1 RNASEQ 0.991776 581217 0.972231 0.993995 0.830988 21951 1 76 0.00207547 288 0 9.93131e+07 0.027426 220130 9.99131e+07 9.02394e+06 21980 4.94456e+07 0 0.141243 0.993995 0.825998 9.93131e+07 0.00297052 2.21386e+07 1.27029e+07 2.21898e+07 271 2.22868e+07 2.13231e+07 0.002522 2.22535e+07 49.9626 0.00220321 0.996213 0 50.0577 GTEX-XQ3S-0126-SM-4BOO9 1 C1 6 pieces, up to 9x1mm; minimal atherosis 8.1 Blood Vessel Artery - Aorta 0001496 831 1165 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.99051 359556 0.968978 0.992207 0.772388 21232 1 76 0.0022766 119 0 6.01119e+07 0.0305893 142979 6.0584e+07 3.57392e+06 21250 2.99147e+07 0 0.19659 0.992207 0.766369 6.01119e+07 0.00283663 1.28785e+07 7.42589e+06 1.29415e+07 130 1.29711e+07 1.06459e+07 0.00255614 1.29501e+07 49.9596 0.00236001 0.993905 0 50.122 GTEX-XQ3S-0426-SM-4BOOA 0 C1 2 pieces, 8x7 & 8x7mm; minimal interstitial fat, good aliquots 8.4 Muscle Muscle - Skeletal 0011907 852 1145 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.993207 497278 0.978444 0.994709 0.876913 19126 1 76 0.00170749 197 0 7.76056e+07 0.021366 623037 7.80184e+07 4.57506e+06 19133 3.86759e+07 0 0.101532 0.994709 0.872273 7.76056e+07 0.00224838 1.69547e+07 1.15782e+07 1.70134e+07 210 1.70344e+07 1.63526e+07 0.00197752 1.70376e+07 50.0047 0.00798577 0.99621 0 50.0864 GTEX-XQ3S-0526-SM-4BOQA 0 C1 2 pieces, 10x7 & 11x7.5mm; 7.5 Heart Heart - Atrial Appendage 0006631 854 1144 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991983 330823 0.972099 0.993832 0.801592 20959 1 76 0.00193923 103 0 5.49055e+07 0.0276744 808165 5.52462e+07 3.34544e+06 20978 2.73441e+07 0 0.170507 0.993832 0.796648 5.49055e+07 0.00249925 1.17568e+07 6.95114e+06 1.18134e+07 131 1.1822e+07 8.61381e+06 0.00221872 1.18372e+07 50.0321 0.0146284 0.99568 0 50.1201 GTEX-XQ3S-0626-SM-4BOOB 0 C1 2 pieces, 10x8 & 8x8mm; no significant ischemic changes 7.7 Heart Heart - Left Ventricle 0006566 857 1142 BP-33866 RNA isolation_PAXgene Tissue miRNA 12/04/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991686 311779 0.976993 0.99404 0.863757 20192 1 76 0.00205117 120 0 6.08491e+07 0.0228076 1.59585e+06 6.12139e+07 3.72993e+06 20200 3.02986e+07 0 0.113236 0.99404 0.858609 6.08491e+07 0.00266732 1.34701e+07 8.80727e+06 1.35484e+07 161 1.36174e+07 9.69991e+06 0.00235852 1.35337e+07 49.8459 0.0260701 0.996393 0 50.1448 GTEX-XQ3S-0926-SM-4BOPI 2 C1 2 pieces, 8x7 & 8x6mm; mild congestion 7.5 Lung Lung 0008952 869 1137 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989936 347142 0.966258 0.992337 0.786395 22610 1 76 0.00222474 126 0 5.95972e+07 0.0333768 197303 6.00574e+07 3.6857e+06 22639 2.96551e+07 0 0.179864 0.992337 0.780368 5.95972e+07 0.00281949 1.30941e+07 8.89401e+06 1.32169e+07 139 1.3241e+07 9.70872e+06 0.0025214 1.32082e+07 49.938 0.00328524 0.994738 0 50.2334 GTEX-XQ3S-1026-SM-4BOPJ 1 C1 6 pieces, up to 7.5x3mm; all muscularis, good specimens 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 873 1133 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.991658 358341 0.967046 0.993293 0.779684 22794 1 76 0.00213049 156 0 7.75529e+07 0.0327464 798809 7.80766e+07 4.81986e+06 22820 3.86272e+07 0 0.187362 0.993293 0.774455 7.75529e+07 0.00271506 1.67312e+07 8.38727e+06 1.68518e+07 198 1.68489e+07 1.16723e+07 0.00242229 1.68518e+07 50.0043 0.0102311 0.994927 0 50.1796 GTEX-XQ3S-1126-SM-4BOPK 1 C1 6 pieces, up to 7x2mm; squamous mucosa ~20 % ot thickness 6.5 Esophagus Esophagus - Mucosa 0006920 875 1132 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.989289 506879 0.963749 0.991075 0.796231 21477 1 76 0.00211867 157 0 7.34532e+07 0.0360548 529500 7.41147e+07 4.62134e+06 21495 3.65742e+07 0 0.167518 0.991075 0.789125 7.34532e+07 0.00286344 1.6366e+07 1.73123e+07 1.65383e+07 182 1.65405e+07 1.13945e+07 0.00249038 1.64966e+07 49.9336 0.00714433 0.99286 0 50.2619 GTEX-XQ3S-1226-SM-4BOPP 1 C1 6 pieces, up to 9x3mm; all muscularis, good specimens 6.6 Esophagus Esophagus - Muscularis 0004648 876 1131 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.986456 486154 0.963607 0.988978 0.770182 22929 1 76 0.00218347 156 0 7.48439e+07 0.0362079 903123 7.5678e+07 4.62294e+06 22959 3.72224e+07 0 0.193425 0.988978 0.761693 7.48439e+07 0.0029352 1.59833e+07 9.75576e+06 1.60877e+07 182 1.60943e+07 1.02327e+07 0.00255838 1.61539e+07 50.0925 0.0119338 0.991501 0 50.1628 GTEX-XQ3S-1326-SM-4BOPQ 1 C1 2 pieces, 10x9 & 8x8mm; focal skeletal muscle in both aliquots up to ~2x1mm, delineated 6.8 Breast Breast - Mammary Tissue 0008367 879 1129 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989 346509 0.969215 0.991546 0.806634 22143 1 76 0.0020776 124 0 5.56635e+07 0.0305485 357905 5.61381e+07 3.40271e+06 22162 2.76942e+07 0 0.162581 0.991546 0.799815 5.56635e+07 0.00275512 1.21935e+07 7.75369e+06 1.22773e+07 141 1.23068e+07 8.18363e+06 0.00241549 1.23002e+07 49.9867 0.00637544 0.994092 0 50.1713 GTEX-XQ3S-1426-SM-4BOPR 1 C1 6 pieces, up to 8x5mm; squamous epithelium is ~1-2% thickness 7.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 882 1127 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.988349 401425 0.965151 0.990761 0.744256 23465 1 76 0.0022335 123 0 5.75095e+07 0.0346713 334927 5.80458e+07 3.47313e+06 23497 2.86042e+07 0 0.220895 0.990761 0.73738 5.75095e+07 0.00299532 1.26606e+07 9.26079e+06 1.27058e+07 132 1.27389e+07 8.33221e+06 0.00261348 1.27611e+07 50.0437 0.00577005 0.993173 0 50.0892 GTEX-XQ3S-1526-SM-4BOOC 1 C1 6 pieces, up to 7x4mm; squamous epithelium is ~1-2% thickness 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 894 1115 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989067 486257 0.965691 0.991387 0.803224 22300 1 76 0.00210773 133 0 5.6352e+07 0.0341038 305530 5.68415e+07 3.27479e+06 22318 2.80373e+07 0 0.162466 0.991387 0.796306 5.6352e+07 0.00280613 1.22965e+07 9.99898e+06 1.23595e+07 137 1.23803e+07 9.41372e+06 0.00245612 1.24058e+07 50.0514 0.00537512 0.993707 0 50.1277 GTEX-XQ3S-1626-SM-4WAYN 1 C1 2 pieces, 9.5x8 & 8x7mm; 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 897 1113 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.985456 476228 0.965111 0.989292 0.816524 22409 1 76 0.00206434 146 0 6.44103e+07 0.0346073 262599 6.51075e+07 6.08984e+06 22424 3.19805e+07 0 0.148587 0.989292 0.80778 6.44103e+07 0.00343652 1.39302e+07 1.16075e+07 1.40238e+07 162 1.4056e+07 1.05579e+07 0.00274777 1.41476e+07 50.1625 0.00403331 0.993127 0 50.1674 GTEX-XQ3S-1726-SM-4BOOD 2 C1 2 pieces, 11x4 & 12x5mm; all cortex, discontinuous rim of adherent fat on both, up to ~0.5-1mm thick, delineated 7.2 Adrenal Gland Adrenal Gland 0002369 901 1110 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990889 473724 0.959673 0.992621 0.789226 21411 1 76 0.00217804 125 0 5.75364e+07 0.0400998 3.11102e+06 5.79642e+07 3.2569e+06 21432 2.86477e+07 0 0.170447 0.992621 0.783402 5.75364e+07 0.0028036 1.24248e+07 1.23968e+07 1.25411e+07 148 1.25465e+07 6.99659e+06 0.00249027 1.25206e+07 49.9484 0.0536714 0.994353 0 50.2328 GTEX-XQ3S-2426-SM-4WAYB 1 C1 2 pieces, 11x7 & 10x9mm; incidental 05mm lymph node present, encircled 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 914 1101 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-4162,LCSET-4325 11/02/2013 TruSeq.v1 RNASEQ 0.989894 582046 0.963 0.99168 0.794154 23433 1 76 0.00216278 171 0 7.62445e+07 0.0367237 458388 7.68841e+07 6.77159e+06 23458 3.79235e+07 0 0.168846 0.99168 0.787547 7.62445e+07 0.00298853 1.6622e+07 1.64755e+07 1.67298e+07 190 1.67086e+07 1.20653e+07 0.00257491 1.67926e+07 50.1253 0.00596206 0.993467 0 50.1616 GTEX-XQ3S-2526-SM-4BOOG 2 C1 2 pieces, 8x7 & 10x9mm; all stroma 6.9 Prostate Prostate 0002367 917 1099 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989164 411992 0.951922 0.991549 0.747962 23710 1 76 0.0021845 116 0 5.5766e+07 0.0478678 514789 5.62413e+07 3.32823e+06 23734 2.77411e+07 0 0.203961 0.991549 0.74164 5.5766e+07 0.00286386 1.20687e+07 1.09954e+07 1.21495e+07 134 1.21686e+07 6.95803e+06 0.00252336 1.21824e+07 50.0283 0.00915321 0.993934 0 50.1667 GTEX-XQ3S-2726-SM-4BOP2 2 C1 2 pieces, 6x5 & 7x4.5mm; spermatogenesis is present; badly autolyzed 6.6 Testis Testis 0000473 922 1095 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.98828 710285 0.907609 0.990366 0.693628 32826 1 76 0.00222762 148 0 7.90337e+07 0.0920756 674687 7.98025e+07 4.8941e+06 32893 3.93388e+07 0 0.213982 0.990366 0.686945 7.90337e+07 0.0029002 1.59493e+07 2.05685e+07 1.61207e+07 158 1.61916e+07 1.16313e+07 0.0025632 1.603e+07 49.7493 0.00845446 0.992451 0 50.2674 GTEX-XQ8I-0001-SM-4YUVE C1 Blood Whole Blood 0013756 288 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XQ8I-0001-SM-53IUL C1 Blood Whole Blood 0013756 288 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XQ8I-0001-SM-5JK4O C1 Blood Whole Blood 0013756 288 BP-32057 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/11/2012 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XQ8I-0006-SM-4BOQ5 C1 8.3 Blood Whole Blood 0013756 288 BP-32111 RNA isolation_PAXgene Blood RNA (Manual) 10/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.977065 788398 0.958228 0.978762 0.788264 16230 1 76 0.00189236 70 0 7.06055e+07 0.0398627 133913 7.21375e+07 4.57961e+06 16232 3.50789e+07 0 0.169964 0.978762 0.771523 7.06055e+07 0.00264228 1.64413e+07 1.36549e+08 1.66391e+07 110 1.66742e+07 1.96809e+07 0.00226667 1.65391e+07 49.7966 0.00185636 0.980459 0 50.299 GTEX-XQ8I-0008-SM-4WAWM C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 413 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.992223 549761 0.966264 0.994157 0.858145 20118 1 76 0.00197886 166 0 7.18769e+07 0.0335144 444617 7.22993e+07 6.10477e+06 20130 3.57904e+07 0 0.108119 0.994157 0.853131 7.18769e+07 0.00260341 1.56713e+07 1.7376e+07 1.58583e+07 171 1.58376e+07 1.55525e+07 0.00229052 1.58359e+07 49.9974 0.00614967 0.99609 0 50.2966 GTEX-XQ8I-0126-SM-4BOPL 1 C1 2 pieces, 9x6 & 7x7mm; no adipose 7.5 Heart Heart - Left Ventricle 0006566 370 1143 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991311 258488 0.979607 0.993077 0.861353 18785 1 76 0.00263609 98 0 5.16697e+07 0.0202477 1.1386e+06 5.20299e+07 3.09558e+06 18794 2.57355e+07 0 0.118254 0.993077 0.85539 5.16697e+07 0.00324512 1.13680e+07 1.00531e+07 1.15549e+07 138 1.14404e+07 6.27331e+06 0.00294006 1.1547e+07 50.2319 0.0218835 0.994843 0 50.4075 GTEX-XQ8I-0226-SM-4BOPM 1 C1 2 pieces, 7x7 & 11x6mm; up to 0.4mm external adipose focally 7.5 Heart Heart - Atrial Appendage 0006631 373 1141 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.99063 377748 0.977384 0.99223 0.851488 21408 1 76 0.00228933 196 0 7.44138e+07 0.022369 786032 7.49966e+07 4.42218e+06 21425 3.70746e+07 0 0.125896 0.99223 0.844872 7.44138e+07 0.00281784 1.61735e+07 1.01489e+07 1.62843e+07 221 1.6245e+07 1.18518e+07 0.00255316 1.63127e+07 50.1039 0.0104809 0.99383 0 50.1707 GTEX-XQ8I-0326-SM-4BOPN 1 C1 2 pieces, 4x3 & 3x2mm; moderate eccentric atheromatous plaques; up to 0.4 mm external adipose 7.1 Blood Vessel Artery - Coronary 0001621 377 1137 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.98973 504288 0.970103 0.992347 0.821123 22215 1 76 0.00215697 163 0 7.5428e+07 0.0296497 450929 7.60097e+07 4.7974e+06 22240 3.75251e+07 0 0.14898 0.992347 0.814839 7.5428e+07 0.00290937 1.62572e+07 8.61454e+06 1.64372e+07 189 1.64298e+07 1.24897e+07 0.00253218 1.64547e+07 50.0379 0.00593252 0.994965 0 50.2754 GTEX-XQ8I-0426-SM-4BOPO 1 C1 6 pieces, up to 8x2.5mm; 1 piece without epidermis (in this cut). most subcutaneous adipose trimmed 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 412 1103 BP-33923 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990084 307242 0.970443 0.992456 0.811502 22380 1 76 0.00230088 133 0 5.6682e+07 0.0293498 434946 5.71128e+07 3.41013e+06 22397 2.82156e+07 0 0.158941 0.992456 0.805381 5.6682e+07 0.00290234 1.24033e+07 7.84472e+06 1.24791e+07 134 1.25017e+07 9.78158e+06 0.00260089 1.25083e+07 50.013 0.00761556 0.994828 0 50.1524 GTEX-XQ8I-0526-SM-4BOPS 0 C1 2 pieces, 9x8 & 9x8mm; no unfixed center; 1 piece has 20% loose fibrous stroma centrally 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 414 1101 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.990375 595034 0.970507 0.992636 0.798427 23001 1 76 0.00216997 170 0 7.70766e+07 0.0291926 290647 7.76484e+07 4.60198e+06 23031 3.8359e+07 0 0.17208 0.992636 0.792547 7.70766e+07 0.00278957 1.68129e+07 1.05571e+07 1.69816e+07 183 1.70280e+07 1.36359e+07 0.00247906 1.69348e+07 49.8627 0.00374312 0.994897 0 50.2496 GTEX-XQ8I-0626-SM-4BOPT 1 C1 2 pieces, 10x8 & 11x7.5mm; well trimmed, but 10-20% internal adipose 8.3 Muscle Muscle - Skeletal 0011907 439 1077 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990604 402285 0.976763 0.993078 0.861187 19076 1 76 0.00209952 155 0 6.31619e+07 0.0230047 611238 6.36022e+07 3.69826e+06 19083 3.14366e+07 0 0.115576 0.993078 0.855226 6.31619e+07 0.0027226 1.38529e+07 8.74042e+06 1.39604e+07 152 1.40211e+07 1.29695e+07 0.00241028 1.39364e+07 49.8486 0.00961033 0.995553 0 50.1933 GTEX-XQ8I-0726-SM-4BOPU 0 C1 2 pieces, 6x3 & 5x3mm; up to 0.6 mm external adipose 7.4 Nerve Nerve - Tibial 0001323 448 1069 BP-33940 RNA isolation_PAXgene Tissue miRNA 12/05/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.989712 484581 0.958836 0.99195 0.715198 24135 1 76 0.0023087 145 0 7.25504e+07 0.0409327 312511 7.31392e+07 4.20708e+06 24184 3.6102e+07 0 0.243638 0.99195 0.70944 7.25504e+07 0.00293111 1.58206e+07 1.07463e+07 1.59226e+07 154 1.59638e+07 1.02833e+07 0.00261921 1.59381e+07 49.9597 0.00427283 0.994187 0 50.1607 GTEX-XQ8I-0826-SM-4BOOE 0 C1 2 pieces, 3x2.5 & 3x2mm; well trimmed, no lesions 8.6 Blood Vessel Artery - Tibial 0007610 449 1069 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990697 444899 0.966671 0.992797 0.808701 20339 1 76 0.00220345 116 0 5.40283e+07 0.0329148 199344 5.44203e+07 3.04818e+06 20356 2.68823e+07 0 0.15797 0.992797 0.802875 5.40283e+07 0.00274634 1.15044e+07 7.10557e+06 1.15817e+07 120 1.16148e+07 1.01638e+07 0.00247432 1.15808e+07 49.9269 0.00366305 0.994897 0 50.1673 GTEX-XQ8I-0926-SM-4BOOF 1 C1 6 pieces, up to 7x3mm; 1 of 6 without epidermis [in this section; could be on another surface] 7.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 464 1054 BP-34117 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989973 533163 0.963173 0.992544 0.785339 22214 1 76 0.0021424 145 0 6.36626e+07 0.0366517 354517 6.41409e+07 3.76015e+06 22242 3.16797e+07 0 0.177834 0.992544 0.779483 6.36626e+07 0.00284574 1.38742e+07 1.23957e+07 1.39536e+07 150 1.39811e+07 1.01418e+07 0.00249316 1.40116e+07 50.0544 0.00552716 0.995115 0 50.1426 GTEX-XQ8I-1126-SM-4BOO2 1 C1 2 pieces, 8x8 & 8x7mm; well preserved, noninflamed lung; 1 piece has pleura with subpleural pigmented macrophages. 7.1 Lung Lung 0008952 478 1042 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.991242 615043 0.969819 0.99322 0.772283 23435 1 76 0.00219325 166 0 7.60541e+07 0.0298957 377769 7.65733e+07 4.63415e+06 23473 3.78539e+07 0 0.197536 0.99322 0.767046 7.60541e+07 0.00280767 1.68299e+07 1.08766e+07 1.69803e+07 180 1.70194e+07 1.28247e+07 0.00249985 1.69394e+07 49.8822 0.00493343 0.995197 0 50.2224 GTEX-XQ8I-1326-SM-4BOPV 1 C1 6 pieces, up to 8x3mm; well trimmed, slight plaques 6.9 Blood Vessel Artery - Aorta 0001496 481 1040 BP-34001 RNA isolation_PAXgene Tissue miRNA 12/06/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.990607 387049 0.966135 0.992443 0.77537 22729 1 76 0.00225733 136 0 7.34679e+07 0.0335288 191314 7.40273e+07 4.37084e+06 22757 3.65722e+07 0 0.190764 0.992443 0.769511 7.34679e+07 0.00287239 1.57404e+07 9.07474e+06 1.58687e+07 160 1.58851e+07 1.2678e+07 0.00256429 1.58536e+07 49.9504 0.00258437 0.994279 0 50.2029 GTEX-XQ8I-1426-SM-4BOPW 0 C1 2 pieces, 11x7 & 11x7mm; slight hollow center 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 483 1039 BP-34001 RNA isolation_PAXgene Tissue miRNA 12/06/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.988931 252369 0.969018 0.991531 0.800433 22346 1 76 0.00229226 120 0 5.54244e+07 0.0307451 396757 5.58978e+07 3.45863e+06 22361 2.75773e+07 0 0.168585 0.991531 0.793654 5.54244e+07 0.00293613 1.21021e+07 7.97722e+06 1.22286e+07 135 1.22448e+07 8.46454e+06 0.00261335 1.22239e+07 49.9574 0.00709789 0.994131 0 50.2601 GTEX-XQ8I-1526-SM-4BOOH 1 C1 6 pieces, up to 7x3mm; well dissected, superficial surface sloughed 8.3 Esophagus Esophagus - Mucosa 0006920 484 1038 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991253 365388 0.967465 0.993005 0.781144 21925 1 76 0.00219924 123 0 5.85774e+07 0.0322713 144156 5.899e+07 3.46134e+06 21941 2.91718e+07 0 0.186321 0.993005 0.77568 5.85774e+07 0.00280833 1.29995e+07 9.84122e+06 1.30866e+07 126 1.31161e+07 1.10957e+07 0.00250325 1.30727e+07 49.9172 0.00244373 0.994756 0 50.1671 GTEX-XQ8I-1626-SM-4BOOI 1 C1 6 pieces, up to 8x4mm; well dissected, no mucosa, no adipose 7.5 Esophagus Esophagus - Muscularis 0004648 486 1037 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991067 357207 0.962098 0.992851 0.775734 21638 1 76 0.0021939 110 0 5.19809e+07 0.0376874 302707 5.23552e+07 3.10345e+06 21655 2.5881e+07 0 0.186364 0.992851 0.770188 5.19809e+07 0.00282988 1.11039e+07 8.18151e+06 1.11862e+07 117 1.119e+07 8.29995e+06 0.00251131 1.1192e+07 50.0044 0.00578179 0.994635 0 50.1846 GTEX-XQ8I-1726-SM-4BOQB 1 C1 2 pieces, 9.5x9 & 9x8mm; lymphoid tissue better preserved than in ileum 6 Spleen Spleen 0002106 488 1036 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989712 464959 0.94608 0.991676 0.700329 23453 1 76 0.00249265 106 0 5.55826e+07 0.0533514 237351 5.60491e+07 3.45673e+06 23481 2.76465e+07 0 0.245751 0.991676 0.694499 5.55826e+07 0.00315905 1.20196e+07 1.58796e+07 1.2101e+07 113 1.21363e+07 7.86198e+06 0.00282519 1.20955e+07 49.9159 0.0042347 0.99364 0 50.1686 GTEX-XQ8I-1826-SM-4BOOJ 1 C1 6 pieces, up to 10x6mm; well trimmed, no mucosa, no adipose 6.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 490 1034 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989642 331763 0.96353 0.991957 0.75096 22735 1 76 0.00226638 120 0 6.43221e+07 0.0362509 302393 6.48436e+07 3.92713e+06 22764 3.20112e+07 0 0.21257 0.991957 0.74492 6.43221e+07 0.00296262 1.38333e+07 8.09109e+06 1.39323e+07 138 1.39568e+07 1.01646e+07 0.00261369 1.39498e+07 49.9874 0.00466342 0.994273 0 50.1784 GTEX-XQ8I-1926-SM-4BOOK 1 C1 2 pieces, 8x8 & 8x8mm; autolysis varies 1 to 2; well trimmed; 10% internal adipose 6.8 Pancreas Pancreas 0001150 492 1033 BP-34031 RNA isolation_PAXgene Tissue miRNA 12/07/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.989971 751916 0.960703 0.992055 0.815237 21623 1 76 0.00223106 102 0 8.01929e+07 0.0389006 181246 8.08351e+07 4.88911e+06 21643 3.9911e+07 0 0.145466 0.992055 0.80876 8.01929e+07 0.00281791 1.81885e+07 3.89083e+07 1.85231e+07 120 1.85379e+07 2.33668e+07 0.00252387 1.83461e+07 49.7399 0.00224217 0.99414 0 50.4557 GTEX-XQ8I-2026-SM-4BOOL 1 C1 6 pieces, up to 8.5x4mm; good thick mucosa 6.9 Stomach Stomach 0000945 492 1033 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989384 266071 0.96836 0.991227 0.778883 22445 1 76 0.00232782 195 0 5.476e+07 0.0314077 816167 5.52446e+07 3.41732e+06 22466 2.7264e+07 0 0.189477 0.991227 0.77205 5.476e+07 0.00294102 1.23008e+07 2.89396e+07 1.23656e+07 143 1.23921e+07 9.88511e+06 0.00263385 1.23746e+07 49.9648 0.0147737 0.993069 0 50.1315 GTEX-XQ8I-2126-SM-4BOOM 1 C1 6 pieces, up to 8x2mm; mucosa superficially sloughed otherwise well preserved; lymphoid nodules annotated 7.6 Colon Colon - Transverse 0001157 495 1031 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990692 348335 0.967274 0.992549 0.75833 23267 1 76 0.00259302 121 0 5.97574e+07 0.0320733 979302 6.0206e+07 3.52164e+06 23297 2.97389e+07 0 0.208944 0.992549 0.75268 5.97574e+07 0.00322697 1.32047e+07 8.57821e+06 1.32491e+07 138 1.32747e+07 7.73133e+06 0.0029094 1.32789e+07 50.0079 0.0162658 0.994406 0 50.084 GTEX-XQ8I-2326-SM-4BOQC 1 C1 6 pieces, up to 7x3mm; well dissected, no mucosa, some adipose 7.3 Colon Colon - Sigmoid 0001159 503 1024 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989232 396295 0.965941 0.991928 0.770348 22247 1 76 0.00229763 116 0 5.54955e+07 0.0338324 377915 5.59471e+07 3.3562e+06 22264 2.76021e+07 0 0.195593 0.991928 0.76413 5.54955e+07 0.00294139 1.19382e+07 7.25517e+06 1.20148e+07 124 1.20503e+07 8.54917e+06 0.00261863 1.20436e+07 49.9861 0.00675486 0.994623 0 50.1599 GTEX-XQ8I-2426-SM-4WAXY 1 C1 2 pieces, 8x8 & 9x8mm; 1 piece is all adipose with 40% empty central hole. other piece has several ducts in fibrous stroma, remainder adipose 6.4 Breast Breast - Mammary Tissue 0008367 503 1024 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.988485 529322 0.962852 0.991081 0.783007 22216 1 76 0.00229516 142 0 6.722e+07 0.0369345 401322 6.7825e+07 6.13314e+06 22234 3.34137e+07 0 0.179845 0.991081 0.776024 6.722e+07 0.00307664 1.4545e+07 1.49827e+07 1.4701e+07 162 1.46846e+07 9.9552e+06 0.00268488 1.47441e+07 50.1012 0.00591703 0.993676 0 50.2666 GTEX-XQ8I-2526-SM-EAZB3 2 C1 2 pieces, 8x7 & 9x7mm; Glands=3; stroma=1. 1 piece is all fibromuscular tissue, no glands; other piece has glands as well as stroma 5.5 Prostate Prostate 0002367 504 1024 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.984242 239788 0.959622 0.985137 0.747707 24681 1 76 0.00226867 149 0 6.97445e+07 0.040199 768356 7.07968e+07 5.40011e+06 24713 3.47451e+07 0 0.211915 0.985137 0.736594 6.97445e+07 0.00348526 1.5216e+07 8.11222e+06 1.53201e+07 166 1.5248e+07 8.45581e+06 0.00287641 1.53526e+07 50.171 0.010853 0.986032 0 50.1705 GTEX-XUJ4-0001-SM-4YUW2 B1 Blood Whole Blood 0013756 -149 BP-32203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XUJ4-0001-SM-53IUY B1 Blood Whole Blood 0013756 -149 BP-32203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XUJ4-0001-SM-5JK4T B1 Blood Whole Blood 0013756 -149 BP-32203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/16/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-XUJ4-0004-SM-4BOQE B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -149 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.990985 899531 0.952895 0.992818 0.804854 19596 1 76 0.00218117 121 0 5.69422e+07 0.0463074 294576 5.73541e+07 3.28371e+06 19616 2.83318e+07 0 0.148042 0.992818 0.799073 5.69422e+07 0.0027099 1.24333e+07 1.48274e+07 1.2554e+07 116 1.26159e+07 1.32231e+07 0.00244505 1.24737e+07 49.7167 0.00513609 0.99465 0 50.2416 GTEX-XUJ4-0005-SM-4BOQ6 B1 8.7 Blood Whole Blood 0013756 -149 BP-32247 RNA isolation_PAXgene Blood RNA (Manual) 10/17/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.988497 1.22567e+06 0.917053 0.990978 0.741843 18770 1 76 0.0022849 99 0 5.63702e+07 0.0825684 206062 5.68834e+07 3.60552e+06 18781 2.80336e+07 0 0.175209 0.990978 0.735151 5.63702e+07 0.00310842 1.17592e+07 5.01217e+07 1.1971e+07 107 1.20189e+07 1.05372e+07 0.00269563 1.1865e+07 49.6778 0.00362254 0.993459 0 50.4463 GTEX-XUJ4-0008-SM-4BOQI B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 196 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.99299 706910 0.964945 0.994402 0.837531 20916 1 76 0.00187769 184 0 7.48782e+07 0.0346648 223381 7.52997e+07 4.27316e+06 20931 3.73022e+07 0 0.127414 0.994402 0.832843 7.48782e+07 0.00233774 1.65071e+07 1.78332e+07 1.66333e+07 166 1.66941e+07 1.75892e+07 0.00210739 1.65524e+07 49.7869 0.00296656 0.995815 0 50.1905 GTEX-XUJ4-0126-SM-4BOP7 1 B1 2 pieces, 10x8 & 10x10mm; all cortex; well preserved 9.7 Adrenal Gland Adrenal Gland 0002369 85 615 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.992295 315927 0.974146 0.994037 0.826356 21311 1 76 0.00215918 114 0 5.9476e+07 0.0254978 521722 5.98328e+07 3.61133e+06 21329 2.96272e+07 0 0.14779 0.994037 0.821428 5.9476e+07 0.00265119 1.30642e+07 8.25745e+06 1.31297e+07 135 1.31643e+07 1.12818e+07 0.00240475 1.3124e+07 49.9233 0.00871967 0.995778 0 50.1252 GTEX-XUJ4-0226-SM-4BOP8 1 B1 2 pieces, 14x8 & 10x8mm; moderate congestion 7.2 Spleen Spleen 0002106 87 613 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.990216 311065 0.959124 0.991924 0.777053 22925 1 76 0.00252095 120 0 5.71722e+07 0.0398825 314995 5.76377e+07 3.29952e+06 22947 2.84462e+07 0 0.182071 0.991924 0.770778 5.71722e+07 0.00315776 1.24818e+07 9.70277e+06 1.25558e+07 131 1.25597e+07 8.86699e+06 0.00283881 1.25702e+07 50.0208 0.00546509 0.993632 0 50.1477 GTEX-XUJ4-0326-SM-4BOP9 1 B1 6 pieces, up to 11x2mm; up to ~1mm adeherent serosa/vasa vasorum, rep. areas delineated 7.3 Blood Vessel Artery - Aorta 0001496 91 609 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 EXCLUDE 0.99177 481337 0.97261 0.99365 0.824586 20969 1 76 0.00200667 138 0 6.86823e+07 0.0270632 205042 6.91212e+07 4.07918e+06 20982 3.41979e+07 0 0.148024 0.99365 0.81935 6.86823e+07 0.00266312 1.47959e+07 6.94329e+06 1.49406e+07 160 1.49258e+07 1.25251e+07 0.00233427 1.49385e+07 50.0213 0.00296641 0.995531 0 50.2433 GTEX-XUJ4-0526-SM-4BOON 1 B1 2 pieces, 9.5x8 & 11x8mm; 2 mm subacute infarct, delineated, in one aliquot 8.7 Heart Heart - Left Ventricle 0006566 99 601 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991754 280890 0.981869 0.993795 0.872253 19583 1 76 0.00221069 122 0 6.05207e+07 0.0178236 1.32215e+06 6.08986e+07 3.65458e+06 19592 3.01413e+07 0 0.109616 0.993795 0.86684 6.05207e+07 0.00276622 1.33594e+07 7.98052e+06 1.34551e+07 151 1.34625e+07 1.06027e+07 0.00248788 1.34532e+07 49.9828 0.0217107 0.995835 0 50.1784 GTEX-XUJ4-0626-SM-4BOOO 1 B1 2 pieces, 12x11 & 11X11mm; 8.7 Heart Heart - Atrial Appendage 0006631 102 598 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991744 400418 0.979665 0.994196 0.852087 19960 1 76 0.00211458 117 0 5.7405e+07 0.0200679 1.09786e+06 5.77401e+07 3.36185e+06 19968 2.857e+07 0 0.127578 0.994196 0.847142 5.7405e+07 0.00277442 1.21252e+07 8.92747e+06 1.21952e+07 139 1.21753e+07 9.62926e+06 0.00244369 1.22657e+07 50.1848 0.0190138 0.996648 0 50.1438 GTEX-XUJ4-0726-SM-4BOOP 1 B1 2 pieces, 11x11 & 16x13mm; 8.1 Thyroid Thyroid 0002046 107 593 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991314 417781 0.963136 0.993012 0.75608 23301 1 76 0.00218975 120 0 5.94769e+07 0.0365759 162131 5.98954e+07 3.55684e+06 23333 2.96208e+07 0 0.207056 0.993012 0.750796 5.94769e+07 0.00274162 1.29794e+07 7.84561e+06 1.3039e+07 128 1.30545e+07 9.90914e+06 0.00246521 1.30586e+07 50.0079 0.0027069 0.994711 0 50.1145 GTEX-XUJ4-0926-SM-4BOPA 1 B1 6 pieces, up to 11x5mm; all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 121 579 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991252 348574 0.973436 0.993251 0.839804 20607 1 76 0.00207424 133 0 5.3626e+07 0.0262822 317840 5.39903e+07 3.26829e+06 20620 2.66984e+07 0 0.133632 0.993251 0.834136 5.3626e+07 0.00261176 1.15541e+07 6.16014e+06 1.16597e+07 130 1.16547e+07 9.65694e+06 0.00234246 1.16595e+07 50.0102 0.00588698 0.995251 0 50.2274 GTEX-XUJ4-1026-SM-4BOPB 1 B1 6 pieces, up to 8x5mm; squamous mucosa up to ~20% thickness 8.8 Esophagus Esophagus - Mucosa 0006920 122 578 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.990879 287554 0.971669 0.992534 0.826807 21286 1 76 0.00223107 122 0 5.53088e+07 0.0279713 201637 5.57249e+07 3.22406e+06 21299 2.75535e+07 0 0.144863 0.992534 0.820634 5.53088e+07 0.00284058 1.23924e+07 1.01239e+07 1.24768e+07 124 1.24983e+07 1.11562e+07 0.00253531 1.24583e+07 49.9198 0.00361844 0.994189 0 50.1696 GTEX-XUJ4-1126-SM-4BOPC 1 B1 6 pieces, up to 11x6mm; all mscularis, good specimens; focal submucosal glands in several sections, delineated 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 125 575 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991889 343846 0.97166 0.99358 0.827106 20964 1 76 0.00208423 120 0 5.25473e+07 0.0280819 296157 5.28868e+07 3.0624e+06 20982 2.61678e+07 0 0.144554 0.99358 0.821796 5.25473e+07 0.00269706 1.13907e+07 6.62632e+06 1.14926e+07 126 1.14807e+07 9.24959e+06 0.00239013 1.14892e+07 50.0186 0.00559983 0.995271 0 50.2227 GTEX-XUJ4-1226-SM-4BOPD 1 B1 6 pieces, up to 9x4mm; well - preserved mucosa ~30-70% thickness 7 Stomach Stomach 0000945 129 571 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.987866 372137 0.973732 0.989975 0.834251 21872 1 76 0.00221076 230 0 6.23036e+07 0.0258763 201431 6.29345e+07 3.85258e+06 21889 3.10031e+07 0 0.139481 0.989975 0.825887 6.23036e+07 0.00277655 1.41433e+07 4.09329e+07 1.42599e+07 160 1.43163e+07 1.56012e+07 0.00249305 1.42162e+07 49.8246 0.00320064 0.992084 0 50.2052 GTEX-XUJ4-1326-SM-4BOQ9 1 B1 2 pieces, 10x10 & 14x9mm; nmerous coropora albicanita, rep. ones delineated 8.6 Ovary Ovary 0000992 134 566 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991688 347162 0.966927 0.993463 0.784655 21487 1 76 0.00202104 121 0 5.22476e+07 0.0327728 95349 5.25914e+07 2.99718e+06 21513 2.60159e+07 0 0.182272 0.993463 0.779525 5.22476e+07 0.00255772 1.14162e+07 6.909e+06 1.1503e+07 115 1.15201e+07 1.02203e+07 0.0022889 1.14888e+07 49.932 0.00181302 0.995237 0 50.1894 GTEX-XUJ4-1426-SM-4BONT 1 B1 2 pieces, 9x7 & 10x8mm; mild congestion 8.5 Lung Lung 0008952 133 567 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.990597 346467 0.97077 0.992617 0.801818 22320 1 76 0.00227053 107 0 5.27387e+07 0.0288847 224540 5.31309e+07 3.23789e+06 22339 2.6255e+07 0 0.168951 0.992617 0.795899 5.27387e+07 0.00291888 1.16351e+07 7.166e+06 1.17355e+07 118 1.17606e+07 9.71337e+06 0.00259404 1.17123e+07 49.8971 0.00422616 0.994637 0 50.2147 GTEX-XUJ4-1526-SM-4BONU 1 B1 2 pieces, 13x11 & 11x10mm; up to ~1mm thick atrophic endometrium, foci fo adenomyosis, delineated 8.6 Uterus Uterus 0000995 136 564 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.992039 423972 0.963607 0.99383 0.764336 22222 1 76 0.00207068 119 0 5.24609e+07 0.0361364 125633 5.27866e+07 3.01477e+06 22247 2.61169e+07 0 0.199271 0.99383 0.75962 5.24609e+07 0.00271206 1.13205e+07 6.82595e+06 1.14316e+07 116 1.14243e+07 9.03444e+06 0.00239079 1.1419e+07 49.9883 0.00238002 0.995621 0 50.2441 GTEX-XUJ4-1626-SM-4BONV 1 B1 6 pieces, up to 13x3mm; squamous epithelium ~10% thickness 8.1 Vagina Vagina 0000996 146 554 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 EXCLUDE 0.98869 465875 0.967955 0.990495 0.771889 24456 1 76 0.00223923 176 0 8.13082e+07 0.0315743 189410 8.20884e+07 4.82475e+06 24486 4.04844e+07 0 0.196066 0.990495 0.764552 8.13082e+07 0.00279975 1.79894e+07 1.15683e+07 1.81319e+07 182 1.81691e+07 1.4375e+07 0.00251898 1.80936e+07 49.8959 0.00230739 0.9923 0 50.1973 GTEX-XUJ4-1726-SM-4BONW 1 B1 2 pieces, 9x7 & 11.5x11mm; 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 148 552 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.990679 283176 0.972038 0.992929 0.835156 21312 1 76 0.00212074 122 0 5.34962e+07 0.0276715 452145 5.38772e+07 3.24802e+06 21324 2.66256e+07 0 0.136882 0.992929 0.829251 5.34962e+07 0.00278157 1.16517e+07 6.85319e+06 1.17559e+07 137 1.17551e+07 8.8004e+06 0.00245041 1.1766e+07 50.023 0.00839215 0.995179 0 50.2227 GTEX-XUJ4-1826-SM-4BOOU 0 B1 6 pieces, up to 10x3mm; squamous epithelium ~1% thickness 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 150 550 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.99035 281992 0.96862 0.992044 0.796388 22159 1 76 0.00218467 130 0 5.56193e+07 0.0311931 609194 5.60653e+07 3.33488e+06 22178 2.77067e+07 0 0.172232 0.992044 0.790052 5.56193e+07 0.00280908 1.22166e+07 8.0982e+06 1.22748e+07 134 1.22631e+07 8.88134e+06 0.00249634 1.23202e+07 50.1162 0.0108658 0.993738 0 50.1187 GTEX-XUJ4-1926-SM-4BOOV 0 B1 2 pieces, 13x8 & 13x12.5mm; 5mm focus apocrine metaplasia in one section, fibrosystic change 8.3 Breast Breast - Mammary Tissue 0008367 163 537 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.989454 290192 0.968345 0.992094 0.782669 23290 1 76 0.00217207 121 0 5.57368e+07 0.0312502 144018 5.6181e+07 3.45024e+06 23308 2.77326e+07 0 0.185676 0.992094 0.776481 5.57368e+07 0.00275858 1.21865e+07 6.90686e+06 1.22735e+07 123 1.23196e+07 1.00749e+07 0.00246454 1.22807e+07 49.9209 0.00256347 0.994734 0 50.1778 GTEX-XUJ4-2026-SM-4BOOW 1 B1 6 pieces, up to 9x2mm; muscosa well preserved, ~30% thickness 7.5 Colon Colon - Transverse 0001157 167 533 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.986798 263114 0.971927 0.989498 0.823333 21787 1 76 0.00266871 123 0 5.46832e+07 0.0261096 488144 5.52636e+07 3.33718e+06 21807 2.71579e+07 0 0.148594 0.989498 0.814687 5.46832e+07 0.00332584 1.21984e+07 8.08491e+06 1.22641e+07 132 1.22912e+07 8.70748e+06 0.00299638 1.23033e+07 50.0246 0.00883301 0.992199 0 50.1343 GTEX-XUJ4-2126-SM-4BOOX 1 B1 6 pieces, up to 11.5x6mm; ~90% target muscularis, good specimens, rep area delineated 8.2 Colon Colon - Sigmoid 0001159 181 519 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.989702 300304 0.971787 0.992164 0.829324 21388 1 76 0.00212239 147 0 6.25194e+07 0.0279581 346169 6.30132e+07 3.89524e+06 21406 3.1117e+07 0 0.142463 0.992164 0.822826 6.25194e+07 0.00275887 1.33919e+07 6.76365e+06 1.35316e+07 147 1.35446e+07 1.11121e+07 0.00243984 1.3521e+07 49.9565 0.0054936 0.994626 0 50.2593 GTEX-XUJ4-2426-SM-4BOO3 0 B1 6 pieces, up to 12x4mm; squamous epithelium ~1-2% thickness 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 197 503 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.9895 460851 0.967772 0.991449 0.830836 21331 1 76 0.0021947 139 0 5.36845e+07 0.0320245 436014 5.41475e+07 3.27544e+06 21345 2.67156e+07 0 0.136937 0.991449 0.823731 5.36845e+07 0.00289283 1.16819e+07 9.80384e+06 1.17754e+07 133 1.17715e+07 9.52448e+06 0.00254308 1.17923e+07 50.0441 0.00805234 0.993398 0 50.1993 GTEX-XUJ4-2526-SM-4BOO4 1 B1 2 pieces, 15x10 & 13x8mm; 6 Adipose Tissue Adipose - Subcutaneous 0002190 199 501 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.991577 458220 0.970191 0.993646 0.813451 21614 1 76 0.00211789 135 0 6.12104e+07 0.0295405 243083 6.16018e+07 3.56699e+06 21636 3.04763e+07 0 0.156739 0.993646 0.808283 6.12104e+07 0.00274697 1.33453e+07 1.01602e+07 1.34436e+07 144 1.34669e+07 1.08297e+07 0.00243178 1.34451e+07 49.9596 0.00394604 0.995715 0 50.1835 GTEX-XUJ4-2626-SM-4BOQ3 0 B1 2 pieces, 15x10 & 24.5x10mm; 10--20% interstitialfat 7.9 Muscle Muscle - Skeletal 0011907 201 499 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 EXCLUDE 0.992279 415055 0.976521 0.994142 0.87374 18870 1 76 0.00204808 163 0 6.97002e+07 0.0232958 980677 7.01109e+07 4.21716e+06 18875 3.47224e+07 0 0.10278 0.994142 0.868622 6.97002e+07 0.00262751 1.52373e+07 1.11195e+07 1.54622e+07 178 1.54288e+07 1.3286e+07 0.00233725 1.53852e+07 49.9292 0.0139875 0.996006 0 50.3663 GTEX-XUJ4-2726-SM-4BOQ1 0 B1 4 pieces, up to 10x6mm; a few discontinous rims adherent fat up to ~0.5mm delineated 7.4 Nerve Nerve - Tibial 0001323 205 495 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.988401 388686 0.940691 0.990574 0.723707 24255 1 76 0.00222259 129 0 5.71132e+07 0.059048 199232 5.76567e+07 3.40124e+06 24289 2.84145e+07 0 0.216985 0.990574 0.716885 5.71132e+07 0.00283778 1.22012e+07 7.29442e+06 1.22691e+07 124 1.22921e+07 8.56633e+06 0.00252951 1.22988e+07 50.0136 0.00345549 0.992746 0 50.1386 GTEX-XUJ4-2826-SM-4BOQ2 0 B1 4 pieces, up to 7x5mm; prominent calcfied atherosclerosis, good clean specimens 7.3 Blood Vessel Artery - Tibial 0007610 205 495 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145 07/03/2013 TruSeq.v1 EXCLUDE 0.983294 311818 0.971961 0.985306 0.820543 21387 1 76 0.0021381 120 0 5.75932e+07 0.0277153 186159 5.84521e+07 3.59106e+06 21403 2.86706e+07 0 0.151418 0.985306 0.808486 5.75932e+07 0.00270205 1.24513e+07 6.46969e+06 1.2532e+07 133 1.25449e+07 1.07057e+07 0.0024195 1.2551e+07 50.0123 0.00318481 0.987318 0 50.1615 GTEX-XUW1-0002-SM-4YUXF C1 Blood Whole Blood 0013756 249 BP-32277 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/18/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XUW1-0002-SM-53IVO C1 Blood Whole Blood 0013756 249 BP-32277 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/18/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-XUW1-0002-SM-5JK4P C1 Blood Whole Blood 0013756 249 BP-32277 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/18/2012 LCSET-5036 03/11/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XUW1-0005-SM-4BOQ7 C1 8.4 Blood Whole Blood 0013756 249 BP-32247 RNA isolation_PAXgene Blood RNA (Manual) 10/17/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990916 589631 0.958446 0.992851 0.771437 19806 1 76 0.0023826 103 0 5.85943e+07 0.0411056 211249 5.90162e+07 3.3646e+06 19821 2.91574e+07 0 0.187009 0.992851 0.765922 5.85943e+07 0.00302959 1.28076e+07 2.66475e+07 1.292e+07 118 1.29819e+07 1.10034e+07 0.00270546 1.28616e+07 49.7671 0.00357951 0.994786 0 50.2184 GTEX-XUW1-0008-SM-4BOQH C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 338 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.992525 682595 0.96628 0.994107 0.835676 20602 1 76 0.00188236 148 0 6.67594e+07 0.0333273 195972 6.71552e+07 3.92863e+06 20617 3.32444e+07 0 0.130603 0.994107 0.830752 6.67594e+07 0.00241107 1.47276e+07 1.44948e+07 1.48516e+07 147 1.49143e+07 1.48755e+07 0.00214629 1.47698e+07 49.7566 0.0029182 0.99569 0 50.2097 GTEX-XUW1-0126-SM-4BOOQ 0 C1 2 pieces, 8.5x7 & 8.5x8mm; tiny (early) serous cystadenofibroma on surface of 1 piece 7.7 Ovary Ovary 0000992 281 1051 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.987011 706854 0.961831 0.989511 0.742685 23215 1 76 0.00216513 169 0 8.11699e+07 0.0379423 204131 8.20304e+07 4.79452e+06 23250 4.03725e+07 0 0.219146 0.989511 0.734895 8.11699e+07 0.00278682 1.77278e+07 1.52323e+07 1.79009e+07 175 1.79692e+07 1.39314e+07 0.00247519 1.78592e+07 49.8465 0.00248848 0.99201 0 50.2429 GTEX-XUW1-0226-SM-4BOOS 0 C1 2 pieces, 9x6 & 9x9mm; no endometrium, only myometrium (in these sections) 8.8 Uterus Uterus 0000995 284 1049 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990573 456570 0.964953 0.992863 0.770938 22014 1 76 0.00214797 122 0 5.97336e+07 0.0347869 132984 6.0163e+07 3.56042e+06 22038 2.97261e+07 0 0.194015 0.992863 0.765436 5.97336e+07 0.00272655 1.30054e+07 8.40238e+06 1.31171e+07 131 1.31496e+07 1.02281e+07 0.00243659 1.31058e+07 49.9166 0.0022104 0.995153 0 50.2137 GTEX-XUW1-0326-SM-4BOOR 0 C1 6 pieces, up to 8x4mm; 6.7 Vagina Vagina 0000996 287 1046 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990505 400788 0.96793 0.992666 0.760881 23352 1 76 0.00222933 120 0 5.67304e+07 0.031813 238028 5.71496e+07 3.5325e+06 23379 2.82324e+07 0 0.207049 0.992666 0.755301 5.67304e+07 0.00278041 1.25358e+07 6.88533e+06 1.26164e+07 126 1.26529e+07 9.11346e+06 0.00250427 1.26159e+07 49.9268 0.004165 0.994826 0 50.1602 GTEX-XUW1-0426-SM-4BOOT 0 C1 6 pieces, up to 8x3mm; well trimmed, virtually free of subcutaneous adipose 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 337 997 BP-34129 RNA isolation_PAXgene Tissue miRNA 12/10/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991748 380048 0.96763 0.993417 0.805727 22363 1 76 0.00213855 148 0 5.70147e+07 0.0321312 252525 5.73925e+07 3.26308e+06 22383 2.83952e+07 0 0.161902 0.993417 0.800423 5.70147e+07 0.00283241 1.24022e+07 8.7367e+06 1.24571e+07 135 1.24745e+07 1.0059e+07 0.0024849 1.24817e+07 50.0144 0.00439996 0.995086 0 50.1103 GTEX-XUW1-0526-SM-4BOP3 1 C1 2 pieces, 10x7 & 7x6mm; no fixation artifacts 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 341 993 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991439 341999 0.972066 0.99317 0.808702 21272 1 76 0.00214805 120 0 5.49929e+07 0.0276651 257189 5.53711e+07 3.21978e+06 21290 2.73857e+07 0 0.163364 0.99317 0.803179 5.49929e+07 0.00277187 1.20575e+07 6.75694e+06 1.21339e+07 133 1.21496e+07 9.00551e+06 0.00245942 1.21358e+07 49.9716 0.00464482 0.994902 0 50.1577 GTEX-XUW1-0626-SM-4BOP4 0 C1 2 pieces, 4x3 & 5x3mm; 10 & 20% internal and external adipose 7.9 Nerve Nerve - Tibial 0001323 365 970 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.990257 644381 0.962321 0.992087 0.713733 24111 1 76 0.00224504 169 0 7.7621e+07 0.037389 194510 7.82401e+07 4.71897e+06 24155 3.86327e+07 0 0.248588 0.992087 0.708085 7.7621e+07 0.0028293 1.6996e+07 1.00572e+07 1.70955e+07 165 1.71403e+07 1.14555e+07 0.00253663 1.70895e+07 49.9258 0.00248607 0.993917 0 50.1459 GTEX-XUW1-0726-SM-4BOP5 1 C1 2 pieces, 2x2 & 3x1mm; intimal fibrosis and in one, focal calcification 7.1 Blood Vessel Artery - Tibial 0007610 368 968 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989039 401967 0.968201 0.990792 0.773942 21119 1 76 0.00227157 138 0 6.50597e+07 0.031436 262519 6.56643e+07 3.74602e+06 21151 3.23804e+07 0 0.194259 0.990792 0.766816 6.50597e+07 0.00289567 1.40787e+07 6.63560e+06 1.41481e+07 143 1.41738e+07 1.07688e+07 0.00258307 1.41628e+07 49.9805 0.00399789 0.992546 0 50.1229 GTEX-XUW1-0826-SM-4BOP6 0 C1 2 pieces, 9x7 & 10x8mm; 1 piece has 25% internal adipose 8.9 Muscle Muscle - Skeletal 0011907 372 964 BP-34205 RNA isolation_PAXgene Tissue miRNA 12/11/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.992351 364508 0.976734 0.994149 0.862022 19549 1 76 0.00200135 135 0 6.48107e+07 0.0230301 849367 6.51922e+07 3.75473e+06 19561 3.22859e+07 0 0.114712 0.994149 0.856978 6.48107e+07 0.00253412 1.42525e+07 8.88267e+06 1.43763e+07 158 1.43877e+07 1.25892e+07 0.00226726 1.43476e+07 49.9303 0.0130287 0.995946 0 50.2162 GTEX-XUW1-0926-SM-4BONX 0 C1 6 pieces, up to 6x3mm; some focal subcutaneous adipose, otherwise well trimmed 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 379 958 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.990025 548531 0.962677 0.991897 0.752313 23531 1 76 0.00215498 171 0 7.50335e+07 0.0371569 620458 7.56464e+07 4.41998e+06 23560 3.73472e+07 0 0.210364 0.991897 0.746217 7.50335e+07 0.0028637 1.64134e+07 1.16509e+07 1.65705e+07 179 1.65505e+07 1.04017e+07 0.00250867 1.65744e+07 50.036 0.00820208 0.993769 0 50.2381 GTEX-XUW1-1026-SM-4BONY 0 C1 2 pieces, 10x7 & 10x8mm; well trimmed, no adipose 7.5 Thyroid Thyroid 0002046 403 934 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989451 324635 0.964127 0.991516 0.728469 22915 1 76 0.0022417 111 0 5.57899e+07 0.0356345 221446 5.62673e+07 3.48804e+06 22941 2.77726e+07 0 0.235658 0.991516 0.722289 5.57899e+07 0.0028664 1.21989e+07 7.01631e+06 1.22676e+07 120 1.23019e+07 8.06794e+06 0.0025534 1.22765e+07 49.9484 0.00393561 0.993581 0 50.1405 GTEX-XUW1-1126-SM-4BONZ 1 C1 6 pieces, up to 8x2mm; well trimmed; minimal plaque 7.8 Blood Vessel Artery - Aorta 0001496 411 927 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991022 413994 0.969765 0.99301 0.809875 21097 1 76 0.00214786 108 0 5.16601e+07 0.0298749 99974 5.20238e+07 2.91151e+06 21111 2.57109e+07 0 0.15989 0.99301 0.804214 5.16601e+07 0.00269986 1.11887e+07 5.63908e+06 1.12862e+07 116 1.13131e+07 9.6565e+06 0.00242331 1.12631e+07 49.8891 0.0019217 0.994997 0 50.217 GTEX-XUW1-1326-SM-4BOO1 1 C1 6 pieces, up to 7x5mm; 2 with 1mm extraneous stroma. 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 418 940 BP-34262 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.991594 513370 0.969371 0.993559 0.790175 22739 1 76 0.00211386 209 0 8.00138e+07 0.0303722 690527 8.05325e+07 4.62088e+06 22766 3.98349e+07 0 0.179195 0.993559 0.785086 8.00138e+07 0.00271585 1.73045e+07 9.67869e+06 1.74548e+07 206 1.74827e+07 1.26118e+07 0.00241426 1.74262e+07 49.9191 0.00857452 0.995524 0 50.2161 GTEX-XUW1-1526-SM-4BOOY 1 C1 6 pieces, up to 9x5mm; well trimmed musc. propria; good ganglion cells 8.6 Esophagus Esophagus - Muscularis 0004648 420 939 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.99145 459846 0.972761 0.993041 0.825358 21751 1 76 0.00205892 168 0 7.23891e+07 0.0268801 574763 7.28964e+07 4.23475e+06 21776 3.60538e+07 0 0.147403 0.993041 0.819614 7.23891e+07 0.0025599 1.56998e+07 8.27562e+06 1.57877e+07 179 1.58166e+07 1.2956e+07 0.00230901 1.57799e+07 49.9419 0.00788465 0.994632 0 50.1395 GTEX-XUW1-1726-SM-4BOOZ 1 C1 2 pieces, 9x8.5 & 9x6mm; well trimmed, no adipose 7.6 Pancreas Pancreas 0001150 425 935 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991746 448831 0.964651 0.993493 0.827267 19841 1 76 0.00237515 91 0 5.49134e+07 0.035157 101194 5.52731e+07 3.41626e+06 19854 2.7349e+07 0 0.137384 0.993493 0.821884 5.49134e+07 0.00299674 1.24876e+07 2.09134e+07 1.26777e+07 103 1.26649e+07 1.59976e+07 0.0026854 1.26004e+07 49.8725 0.0018308 0.995239 0 50.3777 GTEX-XUW1-1826-SM-4BOQD 1 C1 6 pieces, up to 9x4mm. Well trimmed muscularis except for up to 1 mm submucosa in all. 8.1 Colon Colon - Sigmoid 0001159 429 932 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990635 375236 0.968458 0.992517 0.778272 21641 1 76 0.00221308 122 0 5.36788e+07 0.031291 337961 5.40835e+07 3.14344e+06 21663 2.67217e+07 0 0.190187 0.992517 0.772448 5.36788e+07 0.00279866 1.15875e+07 6.39161e+06 1.16858e+07 121 1.17135e+07 8.55463e+06 0.00250532 1.16555e+07 49.876 0.00624888 0.9944 0 50.2111 GTEX-XUW1-1926-SM-4BOP1 1 C1 6 pieces, up to 9x4mm. Well trimmed full thickness specimen. Slight surface sloughing. 8.2 Colon Colon - Transverse 0001157 431 930 BP-34273 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990454 360179 0.969868 0.992399 0.81137 22377 1 76 0.00225744 119 0 5.60494e+07 0.0295657 615305 5.64786e+07 3.43023e+06 22397 2.78988e+07 0 0.158497 0.992399 0.805203 5.60494e+07 0.00285646 1.2272e+07 8.20938e+06 1.23406e+07 137 1.23476e+07 8.65879e+06 0.00255636 1.23666e+07 50.0385 0.0108945 0.994344 0 50.1393 GTEX-XUW1-2326-SM-4BOO5 1 C1 2 pieces, 12x6.5 & 9x9mm. Ducts and lobules with apocrine change in 1 piece. Fibrocystic change. 90% adipose in other piece. 6 Breast Breast - Mammary Tissue 0008367 441 922 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990752 340214 0.968398 0.992671 0.790582 22938 1 76 0.00222433 118 0 5.56807e+07 0.0311388 289011 5.60918e+07 3.14142e+06 22958 2.7719e+07 0 0.177816 0.992671 0.784787 5.56807e+07 0.00283295 1.21913e+07 7.70277e+06 1.2264e+07 129 1.22906e+07 9.1754e+06 0.00252805 1.22683e+07 49.9546 0.00515246 0.994589 0 50.1485 GTEX-XUYS-0001-SM-4YUWO B1 Blood Whole Blood 0013756 -215 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XUYS-0001-SM-53IVC B1 Blood Whole Blood 0013756 -215 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XUYS-0001-SM-5JK2T B1 Blood Whole Blood 0013756 -215 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 LCSET-5036,LCSET-7729 09/08/2015 PCR+ 30x Coverage WGS (HiSeq2000) EXCLUDE GTEX-XUYS-0001-SM-DLIPV B1 Blood Whole Blood 0013756 -215 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 LCSET-10442 01/24/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-XUYS-0002-SM-47JXL B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -210 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.989662 685567 0.965967 0.992403 0.799827 20964 1 76 0.00268914 154 0 7.76709e+07 0.0334853 692728 7.82655e+07 8.777e+06 20990 3.86116e+07 0 0.16614 0.992403 0.793751 7.76709e+07 0.00304118 1.72631e+07 1.40604e+07 1.72385e+07 156 1.73301e+07 1.78328e+07 0.00286467 1.73807e+07 50.0729 0.008851 0.995145 0 49.9644 GTEX-XUYS-0005-SM-47JZ2 B1 9.2 Blood Whole Blood 0013756 -228 BP-32350 RNA isolation_PAXgene Blood RNA (Manual) 10/19/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.985595 683360 0.957287 0.98926 0.780826 20341 1 76 0.00283752 111 0 6.59286e+07 0.0419643 158411 6.66444e+07 7.24179e+06 20355 3.27198e+07 0 0.176461 0.98926 0.77244 6.59286e+07 0.00373635 1.46531e+07 5.07277e+07 1.47114e+07 120 1.48292e+07 1.40821e+07 0.00328527 1.47886e+07 49.9313 0.00237696 0.992925 0 50.0993 GTEX-XUYS-0008-SM-47JYZ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 27 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.991403 523784 0.979654 0.993932 0.866343 19869 1 76 0.00224537 145 0 6.99197e+07 0.0199928 350804 7.03465e+07 7.48646e+06 19878 3.47793e+07 0 0.113311 0.993932 0.861086 6.99197e+07 0.00258375 1.5746e+07 8.93446e+06 1.56966e+07 145 1.57843e+07 1.81258e+07 0.00241413 1.58351e+07 50.0804 0.0049868 0.996462 0 49.9215 GTEX-XUYS-0126-SM-47JWZ 0 B1 6 pieces, up to 12x5.5mm. All have large amounts of subcutaneous adipose tissue, up to 4.7 mm thick (skin is 3mm thick); 2 have attached subcutaneous veins 8.8 Skin Skin - Sun Exposed (Lower leg) 0004264 27 1230 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.987474 560031 0.965257 0.990322 0.807621 23481 1 76 0.00263261 204 0 7.59007e+07 0.0344715 430193 7.66425e+07 8.41178e+06 23502 3.77295e+07 0 0.157636 0.990322 0.799805 7.59007e+07 0.00319462 1.63892e+07 1.41568e+07 1.63421e+07 177 1.63869e+07 1.35227e+07 0.0029128 1.65662e+07 50.272 0.00561298 0.993171 0 49.9281 GTEX-XUYS-0226-SM-47JX1 0 B1 2 pieces, 11.5x9 & 9x8.5mm. Well fixed, no artifacts 8 Adipose Tissue Adipose - Subcutaneous 0002190 32 1225 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.990191 314418 0.97125 0.992709 0.823562 22239 1 76 0.00258564 141 0 6.35206e+07 0.0284642 476375 6.39871e+07 6.79933e+06 22251 3.15869e+07 0 0.147688 0.992709 0.817558 6.35206e+07 0.00304082 1.39272e+07 7.26105e+06 1.38885e+07 152 1.38939e+07 1.07289e+07 0.00281265 1.40782e+07 50.3294 0.00744486 0.995228 0 49.9304 GTEX-XUYS-0326-SM-47JX2 0 B1 2 pieces, 10x9.5 & 10x9mm; 10% adipose within specimen 8 Muscle Muscle - Skeletal 0011907 41 1216 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988922 291622 0.98325 0.992545 0.875044 19227 1 76 0.00240292 125 0 6.92596e+07 0.0165378 1.07536e+06 6.97798e+07 8.06113e+06 19234 3.44312e+07 0 0.108206 0.992545 0.868521 6.92596e+07 0.00288256 1.4886e+07 7.87822e+06 1.47785e+07 152 1.47988e+07 1.48392e+07 0.00264187 1.50961e+07 50.4973 0.0154107 0.996168 0 49.8188 GTEX-XUYS-0426-SM-47JX3 0 B1 2 pieces, 6x5 & 6x6mm. 1 with 50% occlusive fibrocalcific plaque; 1x2mm extraneous fibroadipose tissue 7.5 Blood Vessel Artery - Tibial 0007610 45 1212 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.988717 389872 0.971696 0.9919 0.830901 21994 1 76 0.00251694 145 0 7.2925e+07 0.0278826 431235 7.35206e+07 7.90967e+06 22012 3.62298e+07 0 0.140794 0.9919 0.824171 7.2925e+07 0.00299336 1.56934e+07 7.87904e+06 1.56465e+07 165 1.56944e+07 1.41482e+07 0.00275439 1.58731e+07 50.2831 0.0058655 0.995082 0 49.9252 GTEX-XUZC-0002-SM-4YUX1 B1 Blood Whole Blood 0013756 -121 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XUZC-0002-SM-53IVH B1 Blood Whole Blood 0013756 -121 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XUZC-0002-SM-5JK3R B1 Blood Whole Blood 0013756 -121 BP-32382 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/22/2012 LCSET-5036,LCSET-7330 07/09/2015 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XUZC-0005-SM-4BOQ8 B1 8.8 Blood Whole Blood 0013756 -121 BP-32482 RNA isolation_PAXgene Blood RNA (Manual) 10/24/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.988547 754364 0.945039 0.990146 0.78064 17654 1 76 0.00238519 85 0 5.82936e+07 0.0538326 110162 5.88737e+07 3.50244e+06 17663 2.90047e+07 0 0.164399 0.990146 0.772948 5.82936e+07 0.00312786 1.28943e+07 6.58004e+07 1.30853e+07 105 1.31182e+07 1.34587e+07 0.00275593 1.29622e+07 49.7009 0.00187116 0.991745 0 50.3675 GTEX-XUZC-0008-SM-4BOQG B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 161 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.992969 536982 0.968384 0.994433 0.847172 19760 1 76 0.00179211 123 0 5.80608e+07 0.0312536 213431 5.83859e+07 3.29677e+06 19773 2.89252e+07 0 0.121212 0.994433 0.842456 5.80608e+07 0.00228588 1.28064e+07 1.33087e+07 1.29043e+07 124 1.29509e+07 1.43932e+07 0.00203863 1.28467e+07 49.7979 0.00365552 0.995896 0 50.1906 GTEX-XUZC-0126-SM-4BOO6 1 B1 2 pieces, 17x11.5 & 14.5x10mm; no significant inflammation noted 6.9 Thyroid Thyroid 0002046 96 533 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.990672 415083 0.958456 0.992742 0.755886 22528 1 76 0.00201623 116 0 5.59011e+07 0.0412705 141939 5.63098e+07 3.37554e+06 22549 2.78346e+07 0 0.20257 0.992742 0.7504 5.59011e+07 0.00262915 1.21747e+07 1.10054e+07 1.22461e+07 124 1.22796e+07 9.02359e+06 0.00232205 1.2253e+07 49.9458 0.00252068 0.994811 0 50.1462 GTEX-XUZC-0226-SM-4BOO7 1 B1 2 pieces, 14x5 & 17x7mm; patchy hemorrhagic infarction, all cortex, infarcted areas delineated 8.5 Adrenal Gland Adrenal Gland 0002369 100 529 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.993274 532202 0.964759 0.994981 0.839063 21312 1 76 0.00193273 124 0 6.4484e+07 0.0348626 952364 6.48092e+07 3.75662e+06 21324 3.21259e+07 0 0.125696 0.994981 0.834852 6.4484e+07 0.00244492 1.41349e+07 1.60483e+07 1.41849e+07 162 1.42141e+07 1.12137e+07 0.00218839 1.42032e+07 49.9807 0.0146949 0.996688 0 50.0883 GTEX-XUZC-0326-SM-4BOO8 1 B1 6 pieces, up to 12x4mm; all muscularis; good specimens 7.1 Esophagus Esophagus - Muscularis 0004648 102 527 BP-34317 RNA isolation_PAXgene Tissue miRNA 12/13/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.992022 330417 0.968435 0.993977 0.835776 21200 1 76 0.00187396 139 0 6.27668e+07 0.0313344 444842 6.31472e+07 3.65573e+06 21215 3.12617e+07 0 0.132659 0.993977 0.830742 6.27668e+07 0.00254481 1.34026e+07 7.1244e+06 1.35217e+07 154 1.34992e+07 1.05349e+07 0.00220873 1.35385e+07 50.0727 0.00704453 0.995931 0 50.2212 GTEX-XUZC-0426-SM-4BOPE 1 B1 6 pieces, up to 13x3mm; squamous mucosa well-preserved, ~25% thickness 8.5 Esophagus Esophagus - Mucosa 0006920 103 526 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991059 389158 0.975976 0.992909 0.832589 21245 1 76 0.00202171 135 0 6.12932e+07 0.0236335 343874 6.1731e+07 3.79216e+06 21259 3.05154e+07 0 0.143387 0.992909 0.826685 6.12932e+07 0.0026507 1.38017e+07 8.25043e+06 1.39115e+07 146 1.39293e+07 1.12262e+07 0.00233562 1.38941e+07 49.9368 0.00557052 0.994758 0 50.198 GTEX-XUZC-0526-SM-4BOPF 1 B1 6 pieces, up to 14x6mm; all muscuarlis; good specimens 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 107 522 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.991453 382527 0.971184 0.993449 0.836337 20742 1 76 0.00190202 128 0 5.68176e+07 0.028572 369375 5.71922e+07 3.2884e+06 20759 2.82872e+07 0 0.134847 0.993449 0.830858 5.68176e+07 0.00258164 1.21618e+07 6.29954e+06 1.22899e+07 140 1.22766e+07 9.55015e+06 0.00224115 1.22809e+07 50.0087 0.00645848 0.995446 0 50.262 GTEX-XUZC-0626-SM-4BOPG 1 B1 6 pieces, up to 13x2mm; 7.5 Blood Vessel Artery - Aorta 0001496 109 520 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989911 548219 0.969416 0.992527 0.82732 21034 1 76 0.00192306 116 0 5.7328e+07 0.0302865 185720 5.77597e+07 3.42034e+06 21048 2.85204e+07 0 0.142095 0.992527 0.821138 5.7328e+07 0.0026004 1.23035e+07 6.88696e+06 1.24065e+07 134 1.24176e+07 1.05426e+07 0.00226084 1.24361e+07 50.0373 0.00321539 0.995143 0 50.2085 GTEX-XUZC-0726-SM-4BOPH 1 B1 6 pieces, up to 8.5x4mm; mucosa remarkably well-preserved, 20-30% thickness 6.1 Stomach Stomach 0000945 115 514 BP-34240 RNA isolation_PAXgene Tissue miRNA 12/12/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.987259 261026 0.975779 0.989366 0.831914 21120 1 76 0.00185056 237 0 5.80722e+07 0.0239757 431042 5.86964e+07 3.33966e+06 21134 2.8906e+07 0 0.143865 0.989366 0.823067 5.80722e+07 0.00249814 1.31976e+07 4.29147e+07 1.33392e+07 177 1.33414e+07 1.17749e+07 0.00217366 1.33117e+07 49.9444 0.00734359 0.991473 0 50.2669 GTEX-XUZC-0926-SM-4BOQF 1 B1 2 pieces, 11x10 & 16.5x10.5mm; foci of proliferative endometrium ~0.5mm thick, delineated 8.5 Uterus Uterus 0000995 120 509 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.991774 567626 0.969624 0.993683 0.815771 22917 1 76 0.00194979 164 0 7.3031e+07 0.0300348 167612 7.34953e+07 4.47443e+06 22939 3.63646e+07 0 0.153853 0.993683 0.810617 7.3031e+07 0.0025309 1.59519e+07 9.73001e+06 1.60871e+07 180 1.61091e+07 1.28843e+07 0.00223979 1.60637e+07 49.9295 0.00228058 0.995591 0 50.2111 GTEX-XUZC-1026-SM-4BOPY 1 B1 2 pieces, 17x13mm & 17x10mm; multiple follicular/simple cysts 7.6 Ovary Ovary 0000992 122 507 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145 07/03/2013 TruSeq.v1 RNASEQ 0.989966 320710 0.966716 0.992126 0.777381 21641 1 76 0.00198071 122 0 5.67743e+07 0.0330648 137964 5.72249e+07 3.50188e+06 21660 2.8264e+07 0 0.189335 0.992126 0.77126 5.67743e+07 0.00266337 1.24251e+07 7.72414e+06 1.25515e+07 131 1.25625e+07 9.60394e+06 0.0023213 1.25308e+07 49.9368 0.00241091 0.994286 0 50.253 GTEX-XUZC-1126-SM-4BOPZ 1 B1 2 pieces, 9x5 & 12x7mm; 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 124 505 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.99055 454824 0.972369 0.992536 0.820786 22352 1 76 0.00194096 159 0 6.94744e+07 0.0273895 342153 6.99968e+07 4.19481e+06 22373 3.45942e+07 0 0.151583 0.992536 0.81466 6.94744e+07 0.00252587 1.52163e+07 8.97075e+06 1.53729e+07 180 1.53458e+07 1.12099e+07 0.00223283 1.53751e+07 50.0477 0.00488812 0.994522 0 50.256 GTEX-XUZC-1226-SM-4BRVJ 1 B1 6 pieces, up to 13x3mm; glandular metaplasia noted 8.7 Vagina Vagina 0000996 127 502 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3152 TruSeq.v1 RNASEQ 0.990406 464695 0.972521 0.992531 0.812938 23014 1 76 0.00229645 135 0 6.27667e+07 0.0271824 263914 6.32391e+07 6.40712e+06 23036 3.12396e+07 0 0.159583 0.992531 0.806866 6.27667e+07 0.00300237 1.3694e+07 7.168e+06 1.38013e+07 145 1.38149e+07 1.11697e+07 0.00264866 1.381e+07 49.9911 0.00417328 0.994656 0 50.1951 GTEX-XUZC-1326-SM-4BRV2 1 B1 6 pieces, up to 8x2mm; mucosa well preserved ~20% thickness 7.9 Colon Colon - Transverse 0001157 141 488 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98984 376701 0.974488 0.991998 0.796153 22882 1 76 0.00247617 167 0 6.89676e+07 0.0249349 787677 6.95239e+07 6.69789e+06 22915 3.43169e+07 0 0.178335 0.991998 0.789782 6.89676e+07 0.00322416 1.53361e+07 9.35232e+06 1.54742e+07 171 1.54819e+07 9.95631e+06 0.00284936 1.5464e+07 49.9711 0.0113296 0.994155 0 50.2241 GTEX-XUZC-1426-SM-4BRV3 1 B1 6 pieces, up to 7.5x3mm; well preserved mucosa, lymphoid follicles present ~5% total tissue, rep ones delineated 7.7 Small Intestine Small Intestine - Terminal Ileum 0001211 136 493 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988767 362745 0.973692 0.991413 0.79777 23375 1 76 0.00244558 164 0 7.26587e+07 0.0258265 577724 7.3288e+07 7.25818e+06 23404 3.6143e+07 0 0.175922 0.991413 0.790919 7.26587e+07 0.00334397 1.60973e+07 9.45126e+06 1.62691e+07 179 1.62973e+07 1.07971e+07 0.00289358 1.62411e+07 49.9136 0.00788292 0.994059 0 50.2654 GTEX-XUZC-1526-SM-4BRV4 1 B1 6 pieces, up to 10x6mm; all muscularis; good specimens 7.7 Colon Colon - Sigmoid 0001159 146 483 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98995 402880 0.972234 0.99237 0.829817 21402 1 76 0.00219913 129 0 5.33136e+07 0.0275145 260970 5.37234e+07 4.86370e+06 21413 2.65222e+07 0 0.142417 0.99237 0.823485 5.33136e+07 0.00299602 1.15569e+07 5.47319e+06 1.16482e+07 134 1.16535e+07 9.04397e+06 0.0025966 1.16762e+07 50.0486 0.00485766 0.994791 0 50.1967 GTEX-XUZC-1626-SM-4BRVP 0 B1 2 pieces, 14x11 & 14x12mm; extensive microglandular adenosis, well- preserved, rep areas delineated 7.3 Breast Breast - Mammary Tissue 0008367 151 478 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988965 452358 0.96183 0.991278 0.736835 24149 1 76 0.00258142 143 0 7.12585e+07 0.0374435 206018 7.18855e+07 6.908e+06 24184 3.54285e+07 0 0.224995 0.991278 0.730409 7.12585e+07 0.00334026 1.56368e+07 8.54425e+06 1.57399e+07 154 1.57706e+07 1.06804e+07 0.00295995 1.57654e+07 49.9918 0.00286592 0.993592 0 50.1643 GTEX-XUZC-1726-SM-4BRWS 0 B1 8 pieces, up to 11x5mm; squamous epithelium is ~2% thickness 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 163 466 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988228 321047 0.965042 0.990279 0.787586 21469 1 76 0.0023586 138 0 5.42675e+07 0.0347994 553891 5.48002e+07 5.2084e+06 21489 2.70097e+07 0 0.177456 0.990279 0.779929 5.42675e+07 0.00318571 1.18645e+07 8.72364e+06 1.19867e+07 138 1.19701e+07 7.4852e+06 0.0027713 1.1991e+07 50.0436 0.0101075 0.99233 0 50.2562 GTEX-XUZC-1826-SM-4BRVO 0 B1 2 pieces, 17x12 & 17x16mm; 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 163 466 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990775 564643 0.975911 0.992873 0.83301 22446 1 76 0.00221562 172 0 7.82802e+07 0.0237874 365913 7.88422e+07 7.27368e+06 22465 3.89609e+07 0 0.142901 0.992873 0.827073 7.82802e+07 0.00305948 1.72345e+07 8.51687e+06 1.73609e+07 198 1.73812e+07 1.38464e+07 0.00263666 1.73769e+07 49.9939 0.00464108 0.994971 0 50.1827 GTEX-XUZC-2026-SM-4BRW9 0 B1 2 pieces, 3x2 & 4x4mm; clean specimens 7.4 Blood Vessel Artery - Tibial 0007610 174 455 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990178 443643 0.973565 0.992771 0.85384 19852 1 76 0.00218984 130 0 6.27103e+07 0.0261071 162359 6.31669e+07 5.91225e+06 19862 3.11929e+07 0 0.119725 0.992771 0.847667 6.27103e+07 0.00305308 1.33615e+07 5.79764e+06 1.34649e+07 148 1.34656e+07 1.20574e+07 0.00262033 1.35175e+07 50.0962 0.00257032 0.995364 0 50.1929 GTEX-XUZC-2126-SM-4BRW8 0 B1 2 pieces, 10x10 & 13x8mm; ~10% interstitial fat, rep area delineated 7.9 Muscle Muscle - Skeletal 0011907 170 459 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991436 362378 0.981445 0.993695 0.881264 19501 1 76 0.00205216 218 0 7.68055e+07 0.0183363 527352 7.72928e+07 7.50593e+06 19508 3.82513e+07 0 0.100181 0.993695 0.875707 7.68055e+07 0.00256906 1.6936e+07 9.4634e+06 1.71004e+07 229 1.71126e+07 1.55438e+07 0.00231002 1.70778e+07 49.9492 0.00682278 0.995954 0 50.2416 GTEX-XV7Q-0004-SM-4YUWC B1 Blood Whole Blood 0013756 44 BP-32434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/23/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XV7Q-0004-SM-53IV4 B1 Blood Whole Blood 0013756 44 BP-32434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/23/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XV7Q-0004-SM-5JK3G B1 Blood Whole Blood 0013756 44 BP-32434 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/23/2012 LCSET-5036 03/10/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XV7Q-0005-SM-4BRWI B1 6.5 Blood Whole Blood 0013756 44 BP-32482 RNA isolation_PAXgene Blood RNA (Manual) 10/24/2012 LCSET-3152 05/27/2013 TruSeq.v1 EXCLUDE 0.986956 519681 0.968423 0.989368 0.844608 21646 1 76 0.0024786 132 0 6.88916e+07 0.0303343 511702 6.9632e+07 6.94771e+06 21654 3.42373e+07 0 0.123815 0.989368 0.835628 6.88916e+07 0.00343602 1.52899e+07 4.03396e+07 1.54463e+07 143 1.5473e+07 1.61133e+07 0.00295614 1.54423e+07 49.9503 0.00734867 0.991779 0 50.2545 GTEX-XV7Q-0008-SM-4BRWL B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 145 BP-33716 RNA isolation_Trizol Manual (Cell Pellet) 11/29/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992178 577151 0.977008 0.994262 0.859559 20153 1 76 0.00209851 140 0 7.01934e+07 0.0226591 272684 7.05985e+07 7.07707e+06 20168 3.49462e+07 0 0.117449 0.994262 0.854626 7.01934e+07 0.00264712 1.57345e+07 1.07179e+07 1.5856e+07 144 1.59291e+07 1.84409e+07 0.00237224 1.58093e+07 49.8112 0.00386246 0.996345 0 50.1922 GTEX-XV7Q-0126-SM-4BRVK 2 B1 2 pieces, 12x7 & 12x9mm; moderate congestion 8.6 Spleen Spleen 0002106 51 465 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.9886 485031 0.965953 0.990691 0.781101 23498 1 76 0.00322955 133 0 6.96676e+07 0.0315167 304302 7.03222e+07 6.93384e+06 23525 3.45897e+07 0 0.184852 0.990691 0.773829 6.96676e+07 0.0039185 1.54519e+07 1.33763e+07 1.55198e+07 150 1.55859e+07 1.14779e+07 0.0035733 1.55317e+07 49.9129 0.00432725 0.992781 0 50.1096 GTEX-XV7Q-0226-SM-4BRVL 1 B1 2 pieces, 17x12.5 & 11x8mm; all cortex 9 Adrenal Gland Adrenal Gland 0002369 51 465 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990702 430481 0.977585 0.992878 0.851475 20775 1 76 0.00222297 135 0 6.36527e+07 0.0221153 771515 6.41093e+07 6.01407e+06 20788 3.16893e+07 0 0.12611 0.992878 0.845411 6.36527e+07 0.00298038 1.39865e+07 8.46022e+06 1.41296e+07 152 1.4167e+07 1.18641e+07 0.00260084 1.40831e+07 49.8515 0.0120344 0.995054 0 50.2544 GTEX-XV7Q-0326-SM-4BRVM 1 B1 2 pieces, 14x9 & 15x13mm; ~1mm parathyroid gland embedded in one aliquot, delineated 7.2 Thyroid Thyroid 0002046 56 460 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988698 650678 0.966154 0.990995 0.767786 23857 1 76 0.00238325 148 0 7.36543e+07 0.0335718 503349 7.43236e+07 7.12446e+06 23891 3.6637e+07 0 0.198368 0.990995 0.760872 7.36543e+07 0.00323214 1.61378e+07 9.32308e+06 1.62356e+07 168 1.62641e+07 1.10008e+07 0.00280671 1.62762e+07 50.0185 0.0067724 0.993292 0 50.1511 GTEX-XV7Q-0426-SM-4BRVN 1 B1 2 pieces, 20x7 & 14x10mm; mild-moderate edmea/congestion 8.7 Lung Lung 0008952 62 454 BP-34373 RNA isolation_PAXgene Tissue miRNA 12/14/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990956 552970 0.970702 0.992872 0.773522 23121 1 76 0.00236745 130 0 6.80322e+07 0.0289685 263875 6.85206e+07 6.42808e+06 23145 3.38575e+07 0 0.19718 0.992872 0.768009 6.80322e+07 0.00307019 1.49813e+07 1.03788e+07 1.50509e+07 147 1.50909e+07 1.17215e+07 0.00271814 1.50763e+07 49.9758 0.00385103 0.994788 0 50.1158 GTEX-XV7Q-0526-SM-4BRWR 1 B1 6 pieces, up to 10.5x2mm; 6.3 Blood Vessel Artery - Aorta 0001496 65 451 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991897 492320 0.972011 0.993705 0.817077 21842 1 76 0.00234526 149 0 7.06911e+07 0.0276118 343297 7.11389e+07 6.63034e+06 21861 3.51872e+07 0 0.154935 0.993705 0.811933 7.06911e+07 0.00306078 1.5276e+07 7.50325e+06 1.53741e+07 165 1.53726e+07 1.2142e+07 0.00270237 1.54072e+07 50.0563 0.00482573 0.995512 0 50.16 GTEX-XV7Q-0626-SM-4BRV5 1 B1 2 pieces, 4x3 & 3x2mm; up to 7mm layer atherosis, focally calcified 8.4 Blood Vessel Artery - Coronary 0001621 70 446 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991094 518672 0.971893 0.993121 0.837505 20884 1 76 0.00233404 144 0 6.7925e+07 0.0276588 315839 6.83954e+07 6.9975e+06 20900 3.38079e+07 0 0.134387 0.993121 0.831744 6.7925e+07 0.00302932 1.45683e+07 7.48512e+06 1.46771e+07 155 1.46922e+07 1.30003e+07 0.00268097 1.46891e+07 49.9946 0.00461784 0.995149 0 50.1861 GTEX-XV7Q-0726-SM-4BRV6 1 B1 2 pieces, 7x5 & 16x12mm; 8.4 Heart Heart - Atrial Appendage 0006631 73 443 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992351 436675 0.979132 0.994268 0.835461 21565 1 76 0.00229547 198 0 7.80641e+07 0.0206222 1.74032e+06 7.85141e+07 7.31939e+06 21584 3.8876e+07 0 0.14367 0.994268 0.830673 7.80641e+07 0.00296825 1.65907e+07 1.29433e+07 1.68767e+07 226 1.67221e+07 1.21956e+07 0.00263121 1.68643e+07 50.2118 0.0221657 0.996185 0 50.4273 GTEX-XV7Q-0826-SM-4BRV7 1 B1 2 pieces, 12x8 & 11x6mm; mild interstitial fibrossi 8.2 Heart Heart - Left Ventricle 0006566 74 442 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990659 414242 0.978832 0.993081 0.854271 21288 1 76 0.00230576 154 0 6.86714e+07 0.0209379 3.22396e+06 6.91499e+07 6.88272e+06 21297 3.41793e+07 0 0.124561 0.993081 0.848361 6.86714e+07 0.00301905 1.49973e+07 7.90562e+06 1.51403e+07 172 1.51759e+07 1.18803e+07 0.00266153 1.5112e+07 49.8945 0.0466227 0.995503 0 50.2372 GTEX-XV7Q-0926-SM-4BRVQ 1 B1 2 pieces, 12x8.5 & 15x9mm; numerous well-defined Islets, rep. ones delineated 8.6 Pancreas Pancreas 0001150 80 436 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991359 446771 0.976692 0.993476 0.831588 22308 1 76 0.00240147 113 0 7.5394e+07 0.0230149 279726 7.5889e+07 7.82141e+06 22323 3.753e+07 0 0.145104 0.993476 0.826162 7.5394e+07 0.00302907 1.71776e+07 1.65536e+07 1.7389e+07 133 1.73998e+07 1.96124e+07 0.0027146 1.7326e+07 49.8937 0.00368599 0.995594 0 50.3057 GTEX-XV7Q-1026-SM-4BRVR 1 B1 6 pieces, up to 10x6mm; all muscularis 8.6 Esophagus Esophagus - Muscularis 0004648 90 426 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990699 742872 0.968299 0.992784 0.803591 22689 1 76 0.00236907 167 0 7.76312e+07 0.0314312 647525 7.81955e+07 7.13351e+06 22706 3.86298e+07 0 0.164709 0.992784 0.797792 7.76312e+07 0.00316436 1.67113e+07 1.12146e+07 1.6828e+07 184 1.68243e+07 1.28414e+07 0.00276588 1.68773e+07 50.0787 0.00828085 0.99487 0 50.174 GTEX-XV7Q-1126-SM-4BRVS 1 B1 6 pieces, up to 10x5mm; ~40% squamous mucosa, 8.9 Esophagus Esophagus - Mucosa 0006920 92 424 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.99016 458282 0.97014 0.99225 0.782412 22123 1 76 0.00235177 122 0 5.68427e+07 0.0295667 336006 5.72867e+07 5.13027e+06 22139 2.82953e+07 0 0.187728 0.99225 0.776348 5.68427e+07 0.00304642 1.26206e+07 9.14546e+06 1.2705e+07 124 1.27463e+07 1.02634e+07 0.00269836 1.26989e+07 49.9068 0.00586534 0.994339 0 50.1667 GTEX-XV7Q-1226-SM-4BRVT 1 B1 6 pieces, up to 12x6mm; all muscularis, good specimens 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 94 422 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98972 518003 0.970308 0.992028 0.805565 21377 1 76 0.00239414 139 0 6.12363e+07 0.0294174 453683 6.17283e+07 6.11798e+06 21391 3.04628e+07 0 0.164744 0.992028 0.799143 6.12363e+07 0.00306521 1.31662e+07 7.36338e+06 1.32634e+07 142 1.32695e+07 1.01591e+07 0.0027289 1.32975e+07 50.0527 0.00734967 0.994336 0 50.1839 GTEX-XV7Q-1326-SM-4BRWM 2 B1 6 pieces, up to 10x2mm; ~ up to ~30-70% mucosa in thickness, variably preserved 7.1 Stomach Stomach 0000945 96 420 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989756 310183 0.973322 0.991936 0.773657 22835 1 76 0.00262178 155 0 5.75839e+07 0.0259856 774206 5.8052e+07 5.34654e+06 22856 2.86396e+07 0 0.199665 0.991936 0.767419 5.75839e+07 0.00331211 1.29306e+07 1.5146e+07 1.29994e+07 136 1.30345e+07 9.58008e+06 0.00296619 1.30173e+07 49.9671 0.0133364 0.994117 0 50.1325 GTEX-XV7Q-1426-SM-4BRWA 1 B1 2 pieces, 12x9 & 16x8mm; ~30% corpora albicantia 7.9 Ovary Ovary 0000992 101 415 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990441 531300 0.968989 0.992884 0.762408 23326 1 76 0.00233608 170 0 8.47862e+07 0.0307151 189581 8.53939e+07 8.42954e+06 23368 4.21848e+07 0 0.206581 0.992884 0.756982 8.47862e+07 0.00299894 1.86012e+07 1.10071e+07 1.86935e+07 184 1.87713e+07 1.52899e+07 0.0026667 1.87291e+07 49.9437 0.00222008 0.995327 0 50.1237 GTEX-XV7Q-1526-SM-4BRWB 1 B1 2 pieces, 13x10 & 12x7.5mm; 7-1mm proliferative endometrium delineated 7.2 Uterus Uterus 0000995 102 414 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989356 632863 0.965458 0.991874 0.757103 24109 1 76 0.0023913 154 0 7.88477e+07 0.0343027 161110 7.94937e+07 7.64568e+06 24139 3.92228e+07 0 0.208355 0.991874 0.750951 7.88477e+07 0.00320808 1.73378e+07 1.1055e+07 1.74539e+07 170 1.74994e+07 1.26143e+07 0.00279865 1.7489e+07 49.9852 0.0020267 0.994393 0 50.1669 GTEX-XV7Q-1626-SM-4BRWC 2 B1 6 pieces, up to 11x3mm; 1% sloughing squamous mucosa 7.5 Vagina Vagina 0000996 104 412 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988803 525691 0.969949 0.991464 0.763972 23207 1 76 0.00246404 127 0 6.03189e+07 0.0296285 176050 6.08382e+07 5.47888e+06 23228 2.99872e+07 0 0.205977 0.991464 0.75745 6.03189e+07 0.0032786 1.33671e+07 7.67783e+06 1.34344e+07 130 1.34912e+07 1.03089e+07 0.00287022 1.34713e+07 49.9631 0.00289374 0.994126 0 50.1255 GTEX-XV7Q-1726-SM-4BRUU 1 B1 2 pieces, 8x6 & 11x6mm; 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 106 410 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.987558 445758 0.976179 0.990103 0.83823 22602 1 76 0.00238983 164 0 7.81194e+07 0.0234299 788425 7.89003e+07 7.96093e+06 22627 3.88619e+07 0 0.137948 0.990103 0.829934 7.81194e+07 0.00307381 1.71698e+07 1.01845e+07 1.73314e+07 196 1.73625e+07 1.41108e+07 0.00273094 1.73316e+07 49.9554 0.00999267 0.992648 0 50.2342 GTEX-XV7Q-1826-SM-4BRUV 0 B1 6 pieces, up to 10x3mm; ~2% squamous epithelium 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 108 408 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988965 428323 0.967056 0.991313 0.788815 23472 1 76 0.00238451 162 0 7.14827e+07 0.0327679 441836 7.21091e+07 6.70009e+06 23497 3.55689e+07 0 0.178241 0.991313 0.781962 7.14827e+07 0.00308346 1.55976e+07 9.60625e+06 1.57654e+07 171 1.5748e+07 1.10789e+07 0.00273316 1.5782e+07 50.054 0.00612733 0.99366 0 50.2676 GTEX-XV7Q-2126-SM-4BRVX 2 B1 6 pieces, up to 8x1.5mm; mucosa partially sloughed 6.7 Colon Colon - Transverse 0001157 121 395 BP-34730 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.987285 442477 0.970378 0.989553 0.831634 22778 1 76 0.00339158 157 0 7.19045e+07 0.0250578 911478 7.26636e+07 7.29363e+06 22795 3.56073e+07 0 0.138745 0.989553 0.822945 7.19045e+07 0.00417399 1.60612e+07 1.26133e+07 1.61504e+07 179 1.61777e+07 1.08617e+07 0.00378189 1.61901e+07 50.0192 0.0125438 0.991821 0 50.1384 GTEX-XV7Q-2226-SM-4BRVY 1 B1 6 pieces, up to 9x5mm; generally all muscularis 7.7 Colon Colon - Sigmoid 0001159 127 389 BP-34730 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990978 552300 0.97189 0.993135 0.820825 22315 1 76 0.0022772 167 0 7.54191e+07 0.0278255 584347 7.59404e+07 6.96879e+06 22330 3.75373e+07 0 0.151065 0.993135 0.81519 7.54191e+07 0.00303256 1.62819e+07 8.54016e+06 1.63711e+07 178 1.63941e+07 1.33426e+07 0.00265406 1.64197e+07 50.039 0.00769481 0.995292 0 50.1367 GTEX-XV7Q-2326-SM-4BRVZ 1 B1 2 pieces, 15x8 & 12x11.5mm; ductal/lobular units, rep ones delineated 7.1 Breast Breast - Mammary Tissue 0008367 130 386 BP-34730 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988208 670613 0.973545 0.99118 0.811883 22994 1 76 0.00240486 159 0 7.46247e+07 0.0261521 412396 7.52888e+07 7.15409e+06 23017 3.70974e+07 0 0.161662 0.99118 0.804722 7.46247e+07 0.00323918 1.62721e+07 7.8408e+06 1.63925e+07 179 1.64462e+07 1.23377e+07 0.00282077 1.64294e+07 49.9744 0.00547752 0.994151 0 50.1843 GTEX-XV7Q-2426-SM-4BRV8 1 B1 2 pieces, 16x10 & 15x8mm; ~50% glandular elements; rest is mucsoa/stroma. Rep glandular foci delineated 8.7 Salivary Gland Minor Salivary Gland 0006330 139 377 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989779 622227 0.973614 0.992476 0.791225 23111 1 76 0.00238333 141 0 6.93293e+07 0.0259626 274214 6.98549e+07 6.54263e+06 23129 3.44765e+07 0 0.182389 0.992476 0.785271 6.93293e+07 0.00322072 1.55468e+07 1.08781e+07 1.56199e+07 151 1.56809e+07 1.25944e+07 0.00280089 1.56744e+07 49.9896 0.00392548 0.995172 0 50.1173 GTEX-XV7Q-2526-SM-4BRV9 0 B1 6 pieces, up to 11x3.5mm; ~2% thickness is squamous epithelium 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 146 370 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988675 579469 0.968278 0.99075 0.763153 23563 1 76 0.00248671 159 0 7.10709e+07 0.0315168 449835 7.17344e+07 6.93921e+06 23596 3.53665e+07 0 0.205125 0.99075 0.756094 7.10709e+07 0.00327078 1.55396e+07 1.0791e+07 1.56174e+07 163 1.56383e+07 1.0632e+07 0.00287792 1.56679e+07 50.0474 0.00627084 0.992825 0 50.1248 GTEX-XV7Q-2626-SM-4BRVA 0 B1 2 pieces, 13x9.5 & 17x9mm; 7.4 Adipose Tissue Adipose - Subcutaneous 0002190 148 368 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989408 410958 0.973581 0.992132 0.809417 22181 1 76 0.00237937 120 0 5.61341e+07 0.0259551 182118 5.65793e+07 4.91779e+06 22201 2.79134e+07 0 0.164165 0.992132 0.803048 5.61341e+07 0.0030627 1.23093e+07 6.82219e+06 1.23702e+07 129 1.24219e+07 1.03102e+07 0.0027201 1.24091e+07 49.9743 0.00321881 0.994856 0 50.1236 GTEX-XV7Q-2726-SM-9WG6W 0 B1 2 pieces, 7.5x5 & 8x6mm; ~1-15.mm rim of discontinuous flat, rep areas delineated 5.8 Nerve Nerve - Tibial 0001323 151 365 BP-60846 RNA Extraction from Paxgene-derived Lysate Plate Based 02/24/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990506 165333 0.964394 0.993157 0.723322 24280 1 76 0.00261013 156 0 7.53837e+07 0.0353652 389391 7.59031e+07 5.55076e+06 24318 3.74988e+07 0 0.241073 0.993157 0.718372 7.53837e+07 0.00395693 1.64584e+07 7.76361e+06 1.66323e+07 165 1.66452e+07 1.03857e+07 0.00328173 1.66358e+07 49.9859 0.00513011 0.995809 0 50.2628 GTEX-XV7Q-2926-SM-4BRUL 0 B1 2 pieces, 9x6 & 10x9mm; ~35-40% interstitial fat 7.3 Muscle Muscle - Skeletal 0011907 155 361 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990754 459588 0.978541 0.993135 0.855281 19759 1 76 0.00211758 136 0 5.65159e+07 0.0212003 384393 5.69065e+07 5.31729e+06 19769 2.81202e+07 0 0.123259 0.993135 0.84941 5.65159e+07 0.00285701 1.24187e+07 5.59082e+06 1.25417e+07 136 1.25441e+07 1.15419e+07 0.00248641 1.25446e+07 50.001 0.00675481 0.995516 0 50.2465 GTEX-XXEK-0001-SM-4YUWD B1 Blood Whole Blood 0013756 -129 BP-32610 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/30/2012 GTEx_Option_1_OM25_01 10/26/2013 Illumina OMNI SNP Array OMNI GTEX-XXEK-0001-SM-53IV5 B1 Blood Whole Blood 0013756 -129 BP-32610 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/30/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XXEK-0001-SM-5JK35 B1 Blood Whole Blood 0013756 -129 BP-32610 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 10/30/2012 LCSET-5036 03/30/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XXEK-0004-SM-4BRWO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -129 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990291 890271 0.962388 0.992325 0.792956 21231 1 76 0.00246795 173 0 8.15432e+07 0.0371276 576070 8.21739e+07 8.02896e+06 21263 4.05754e+07 0 0.169433 0.992325 0.78687 8.15432e+07 0.00297024 1.79709e+07 1.76289e+07 1.81132e+07 165 1.82162e+07 1.86371e+07 0.00271858 1.80313e+07 49.745 0.00701038 0.994359 0 50.1971 GTEX-XXEK-0004-SM-5S2TO B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -129 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-0005-SM-4BRWJ B1 8 Blood Whole Blood 0013756 -129 BP-32612 RNA isolation_PAXgene Blood RNA (Manual) 10/30/2012 LCSET-3152,LCSET-3618 07/23/2013 TruSeq.v1 RNASEQ 0.985296 1.30071e+06 0.950122 0.986923 0.786474 19101 1 76 0.00227407 150 0 9.81746e+07 0.0484825 140220 9.94754e+07 6.96286e+06 19108 4.88082e+07 0 0.163648 0.986923 0.776189 9.81746e+07 0.00300734 2.17908e+07 1.20739e+08 2.20791e+07 177 2.20892e+07 2.2529e+07 0.0026401 2.19745e+07 49.8698 0.00140959 0.988551 0 50.3286 GTEX-XXEK-0005-SM-5S2TG B1 8 Blood Whole Blood 0013756 -129 BP-32612 RNA isolation_PAXgene Blood RNA (Manual) 10/30/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-0008-SM-4BRW7 B1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 215 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990797 390162 0.976999 0.993442 0.862361 19970 1 76 0.00203275 137 0 6.16073e+07 0.0226442 357513 6.20139e+07 5.99165e+06 19982 3.06576e+07 0 0.114638 0.993442 0.856705 6.16073e+07 0.00266185 1.36843e+07 8.65832e+06 1.38055e+07 133 1.38612e+07 1.56275e+07 0.00234646 1.37889e+07 49.8691 0.00576504 0.996087 0 50.2204 GTEX-XXEK-0126-SM-4BRVU 1 B1 2 pieces, 8.5x7 & 7x6mm; mild congestion; well preserved, abundant lymphoid elements 7.2 Spleen Spleen 0002106 128 1209 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988575 385122 0.965936 0.99077 0.768859 22424 1 76 0.00283813 115 0 5.4643e+07 0.0329023 387283 5.51521e+07 5.23916e+06 22444 2.7161e+07 0 0.197078 0.99077 0.761762 5.4643e+07 0.00372421 1.20804e+07 8.19147e+06 1.21207e+07 123 1.21580e+07 8.63746e+06 0.00328019 1.21613e+07 50.0066 0.00702209 0.992965 0 50.0833 GTEX-XXEK-0326-SM-4BRVV 1 B1 6 pieces, up to 5.5x5mm; squamous mucosa, well-preserved, ~10-15% thickness 9.7 Esophagus Esophagus - Mucosa 0006920 137 1201 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990523 427039 0.974063 0.992249 0.823901 21571 1 76 0.0024002 142 0 6.89316e+07 0.0256462 520333 6.947e+07 6.59183e+06 21585 3.43365e+07 0 0.150163 0.992249 0.817515 6.89316e+07 0.00299993 1.55014e+07 1.2637e+07 1.5568e+07 152 1.56157e+07 1.40111e+07 0.00269954 1.55698e+07 49.9263 0.00749004 0.993975 0 50.1071 GTEX-XXEK-0426-SM-4BRVW 1 B1 6 pieces, up to 7.5x5mm; all muscularis, good specimens 8.3 Esophagus Esophagus - Muscularis 0004648 140 1199 BP-34430 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990191 568130 0.967692 0.992569 0.806436 22218 1 76 0.00227242 157 0 6.9645e+07 0.0320512 841054 7.01664e+07 7.10816e+06 22234 3.46553e+07 0 0.161256 0.992569 0.800444 6.9645e+07 0.00291314 1.5001e+07 1.04066e+07 1.51224e+07 167 1.51191e+07 1.12768e+07 0.00259201 1.51616e+07 50.0703 0.0119866 0.994947 0 50.2015 GTEX-XXEK-0526-SM-4BRWD 1 B1 6 pieces, up to 8x6mm; adherent serosa ~2mm nubbins on most sections, otherwise all muscularis; good specimens 7.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 141 1198 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98894 664273 0.972478 0.991783 0.818174 21946 1 76 0.00224862 159 0 7.27588e+07 0.0272149 594304 7.33616e+07 6.99368e+06 21968 3.6169e+07 0 0.154304 0.991783 0.811451 7.27588e+07 0.00310761 1.57555e+07 7.28884e+06 1.58414e+07 168 1.58895e+07 1.30653e+07 0.00267688 1.59063e+07 50.0264 0.00810102 0.994626 0 50.136 GTEX-XXEK-0626-SM-4BRWE 1 B1 2 pieces, 7x6 & 8x7.5mm; minimal edema; good specimens 8.1 Lung Lung 0008952 145 1194 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988517 345874 0.97322 0.990912 0.841444 21801 1 76 0.00302662 123 0 5.70749e+07 0.0264203 280597 5.75984e+07 5.04914e+06 21812 2.83927e+07 0 0.131776 0.990912 0.833797 5.70749e+07 0.00363532 1.25523e+07 7.07368e+06 1.26022e+07 143 1.26023e+07 8.9933e+06 0.00333023 1.269e+07 50.1735 0.00487161 0.993306 0 50.0992 GTEX-XXEK-0626-SM-5S2SZ 1 B1 2 pieces, 7x6 & 8x7.5mm; minimal edema; good specimens 8.1 Lung Lung 0008952 145 1194 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-0726-SM-4BRWF 1 B1 6 pieces, up to 8.5x3mm; adherent serosa/vasa vasorum in 3 ~0.5mm thick 7.6 Blood Vessel Artery - Aorta 0001496 148 1192 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991853 342879 0.973627 0.993852 0.823192 20262 1 76 0.00217059 118 0 5.48483e+07 0.0260214 201664 5.51875e+07 4.92114e+06 20274 2.73035e+07 0 0.150435 0.993852 0.818132 5.48483e+07 0.00286361 1.18989e+07 5.51693e+06 1.19658e+07 128 1.19914e+07 1.00372e+07 0.0025164 1.1982e+07 49.9804 0.00365416 0.995852 0 50.1402 GTEX-XXEK-0826-SM-4BRWG 1 B1 6 pieces, up to 12x5mm; mucosa well preserved, ~30% total tissue 6.2 Stomach Stomach 0000945 156 1184 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.982318 223465 0.983165 0.985254 0.856275 21088 1 76 0.00216069 313 0 7.17407e+07 0.0165848 1.51806e+06 7.28144e+07 7.49751e+06 21104 3.56712e+07 0 0.12689 0.985254 0.843649 7.17407e+07 0.00295839 1.65684e+07 9.09436e+07 1.68213e+07 230 1.68503e+07 1.83218e+07 0.00255835 1.67328e+07 49.8251 0.0208484 0.988191 0 50.3788 GTEX-XXEK-0926-SM-4BRWH 1 B1 2 pieces, 10x9 & 12x10mm; minimal fibrosis 8.3 Heart Heart - Left Ventricle 0006566 157 1184 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.99173 336129 0.986313 0.993816 0.867061 19011 1 76 0.00201115 266 0 7.35745e+07 0.013476 2.58202e+06 7.40324e+07 6.6902e+06 19019 3.66401e+07 0 0.119253 0.993816 0.861699 7.35745e+07 0.00249931 1.62045e+07 2.06517e+07 1.63601e+07 262 1.62101e+07 1.01291e+07 0.00225472 1.64643e+07 50.3891 0.034877 0.995901 0 50.2389 GTEX-XXEK-0926-SM-5S2T8 1 B1 2 pieces, 10x9 & 12x10mm; minimal fibrosis 8.3 Heart Heart - Left Ventricle 0006566 157 1184 BP-34437 RNA isolation_PAXgene Tissue miRNA 12/17/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-1026-SM-4BRUW 1 B1 6 pieces, up to 8x6mm; rare lymphoid aggregates, delineated 6.6 Small Intestine Small Intestine - Terminal Ileum 0001211 168 1173 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988847 478176 0.971743 0.990912 0.786814 23432 1 76 0.00251263 163 0 7.43478e+07 0.0277154 1.22126e+06 7.50297e+07 6.69222e+06 23459 3.69921e+07 0 0.184929 0.990912 0.779664 7.43478e+07 0.00321534 1.65174e+07 1.04826e+07 1.66216e+07 189 1.66162e+07 1.02555e+07 0.00286325 1.66619e+07 50.0687 0.016277 0.992977 0 50.1572 GTEX-XXEK-1126-SM-4BRUX 1 B1 2 pieces, 8x8 & 8x7mm; mild mixed micro/macrovesicular steatosis, diffuse 8.7 Liver Liver 0001114 169 1173 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991655 329491 0.984319 0.993848 0.866977 19166 1 76 0.00205062 134 0 6.55142e+07 0.0153938 596176 6.59197e+07 5.91062e+06 19172 3.26186e+07 0 0.117342 0.993848 0.861644 6.55142e+07 0.00257596 1.45665e+07 8.50194e+06 1.45951e+07 151 1.46478e+07 1.44107e+07 0.00231271 1.46477e+07 49.9998 0.00904397 0.996042 0 50.049 GTEX-XXEK-1226-SM-4BRUY 1 B1 2 pieces, 12x10 & 11x8mm; mainly stromal hyperplasia; 20% of one section with glandular elements 6.4 Prostate Prostate 0002367 171 1177 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.98937 476538 0.974866 0.992028 0.800975 22895 1 76 0.002252 192 0 8.13122e+07 0.0249049 651883 8.19656e+07 7.82390e+06 22921 4.04363e+07 0 0.17389 0.992028 0.79459 8.13122e+07 0.0030512 1.78129e+07 9.37226e+06 1.79232e+07 203 1.79473e+07 1.32791e+07 0.00265053 1.79978e+07 50.0703 0.00795313 0.994687 0 50.1543 GTEX-XXEK-1326-SM-4BRV1 1 B1 2 pieces, 11.5x10 & 12x8.5mm; rim of fat/small vessels up to ~1mm thick on one section 6.7 Thyroid Thyroid 0002046 176 1167 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989869 550802 0.965715 0.992151 0.753376 23391 1 76 0.00230465 138 0 7.1794e+07 0.0340264 348029 7.2362e+07 6.91631e+06 23427 3.57199e+07 0 0.212339 0.992151 0.747463 7.1794e+07 0.00310704 1.57156e+07 9.95825e+06 1.57793e+07 158 1.58209e+07 1.11723e+07 0.00270492 1.58383e+07 50.0274 0.00480956 0.994434 0 50.101 GTEX-XXEK-1326-SM-5S2SJ 1 B1 2 pieces, 11.5x10 & 12x8.5mm; rim of fat/small vessels up to ~1mm thick on one section 6.7 Thyroid Thyroid 0002046 176 1167 BP-34543 RNA isolation_PAXgene Tissue miRNA 12/19/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-1426-SM-4BRW1 1 B1 2 pieces, 14x7 & 11.5x6mm; 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 180 1163 BP-34730 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991336 456756 0.976631 0.993571 0.833119 21901 1 76 0.00217901 160 0 7.03699e+07 0.0231279 562575 7.08252e+07 6.37890e+06 21913 3.50288e+07 0 0.143511 0.993571 0.827764 7.03699e+07 0.00291583 1.553e+07 1.0062e+07 1.56347e+07 178 1.56718e+07 1.20298e+07 0.00254659 1.56449e+07 49.9572 0.00794315 0.995806 0 50.1679 GTEX-XXEK-1626-SM-4BRUZ 0 B1 6 pieces, up to 8x4mm; squamous epithelium is 2-2.5% thickness 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 187 1157 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.987918 502698 0.969907 0.990791 0.822596 22401 1 76 0.00229363 163 0 6.24656e+07 0.0298823 642059 6.30462e+07 6.05968e+06 22419 3.1055e+07 0 0.147311 0.990791 0.815021 6.24656e+07 0.00315682 1.36793e+07 9.34596e+06 1.37723e+07 154 1.37947e+07 1.06227e+07 0.00272397 1.38347e+07 50.0724 0.0101839 0.993665 0 50.1694 GTEX-XXEK-1726-SM-4BRVB 1 B1 2 pieces, 9x8 & 10x9mm; extremely well preserved, minimal fat, Islets well visualized; representative ones delineated 7 Pancreas Pancreas 0001150 193 1152 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.99039 454004 0.978103 0.992788 0.835521 20851 1 76 0.00255565 115 0 7.69254e+07 0.021558 294296 7.74843e+07 7.95033e+06 20868 3.82591e+07 0 0.142582 0.992788 0.829495 7.69254e+07 0.0032278 1.76241e+07 1.68206e+07 1.77813e+07 128 1.78056e+07 2.10421e+07 0.00289091 1.77864e+07 49.973 0.00379814 0.995186 0 50.2219 GTEX-XXEK-1726-SM-5S2SR 1 B1 2 pieces, 9x8 & 10x9mm; extremely well preserved, minimal fat, Islets well visualized; representative ones delineated 7 Pancreas Pancreas 0001150 193 1152 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-1826-SM-4BRVC 1 B1 6 pieces, up to 8x3mm; generally all muscularis, adherent fat/serosa on 3/6 7.4 Colon Colon - Sigmoid 0001159 196 1150 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989101 568868 0.970725 0.991801 0.807423 21900 1 76 0.00224489 152 0 7.02228e+07 0.0290393 840640 7.08033e+07 6.91518e+06 21917 3.49174e+07 0 0.163302 0.991801 0.800804 7.02228e+07 0.0030496 1.52023e+07 7.79998e+06 1.53008e+07 167 1.53198e+07 1.12788e+07 0.00264615 1.53649e+07 50.0735 0.0118729 0.994501 0 50.1615 GTEX-XXEK-1926-SM-4BRVD 1 B1 6 pieces, up to 9x6mm; mainly muscularis and fat, less than 3% mucosa, well preserved, delineated 8.3 Colon Colon - Transverse 0001157 202 1144 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991321 526524 0.971236 0.99334 0.822301 22031 1 76 0.0021917 144 0 6.57456e+07 0.0284439 606905 6.61864e+07 6.07999e+06 22048 3.27233e+07 0 0.148935 0.99334 0.816824 6.57456e+07 0.00299798 1.42552e+07 8.05216e+06 1.43304e+07 154 1.43513e+07 1.18134e+07 0.00259402 1.43663e+07 50.0263 0.00916963 0.995358 0 50.1314 GTEX-XXEK-2026-SM-4BRVE 1 B1 2 pieces, 10x6 & 10x9mm; 4x2.5mm focus of fat in one section 9 Heart Heart - Atrial Appendage 0006631 206 1141 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992951 372886 0.982599 0.994764 0.84396 21284 1 76 0.0022043 197 0 7.86155e+07 0.0165879 1.63779e+06 7.90292e+07 7.7391e+06 21297 3.91437e+07 0 0.13864 0.994764 0.839541 7.86155e+07 0.00271837 1.68862e+07 1.52365e+07 1.70201e+07 254 1.69441e+07 1.26034e+07 0.00246087 1.7084e+07 50.2056 0.0207238 0.996578 0 50.1974 GTEX-XXEK-2226-SM-4BRUM 0 B1 6 pieces, up to 8x4mm; squamous epithelium is ~2.5-3% thickness. Solar elastosis of papillary dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 215 1132 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989308 442588 0.969034 0.991462 0.785735 23224 1 76 0.00239561 183 0 7.05877e+07 0.0307761 647932 7.11956e+07 6.98992e+06 23249 3.51188e+07 0 0.183298 0.991462 0.779026 7.05877e+07 0.00318575 1.5402e+07 9.71426e+06 1.55174e+07 172 1.55236e+07 1.06408e+07 0.00278982 1.55439e+07 50.0327 0.00910073 0.993615 0 50.1867 GTEX-XXEK-2226-SM-5S2SA 0 B1 6 pieces, up to 8x4mm; squamous epithelium is ~2.5-3% thickness. Solar elastosis of papillary dermis 6.2 Skin Skin - Sun Exposed (Lower leg) 0004264 215 1132 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-2426-SM-4BRUS 0 B1 2 pieces, 9x8 & 11x8mm; embedded ~0.5mm vessel, foci of fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 226 1122 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990976 286279 0.975686 0.992879 0.812533 21727 1 76 0.00228577 138 0 6.33298e+07 0.0240561 429747 6.3784e+07 6.10348e+06 21749 3.15305e+07 0 0.163152 0.992879 0.806747 6.33298e+07 0.00298211 1.39792e+07 6.61859e+06 1.4043e+07 158 1.40568e+07 9.87566e+06 0.00263327 1.40817e+07 50.0442 0.00673754 0.994783 0 50.1138 GTEX-XXEK-2426-SM-5S2S8 0 B1 2 pieces, 9x8 & 11x8mm; embedded ~0.5mm vessel, foci of fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 226 1122 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XXEK-2526-SM-4BRUR 0 B1 2 pieces, 4x3 & 5x4mm; both with rim of adherent fat up to 0.5mm, delineated 6 Nerve Nerve - Tibial 0001323 235 1114 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989317 401623 0.965795 0.991459 0.735867 23597 1 76 0.00238397 143 0 7.07897e+07 0.0339719 325023 7.13995e+07 6.69901e+06 23632 3.52167e+07 0 0.229927 0.991459 0.729582 7.07897e+07 0.00319021 1.55002e+07 8.13156e+06 1.56036e+07 158 1.56325e+07 1.00444e+07 0.00278622 1.56196e+07 49.9794 0.00455217 0.9936 0 50.1661 GTEX-XXEK-2626-SM-5S2T5 0 B1 2 pieces, 5x2 & 3x3mm; both are aggregates of smaller artery branches, one with 2.5x1mm aggregate of interstitial fat and small peripheral nerve, delineated. Sample with caution 7.9 Blood Vessel Artery - Tibial 0007610 236 1114 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 Tech Dev - Large Insert RNA-seq EXCLUDE GTEX-XYKS-0002-SM-4BRWN B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -107 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991178 694804 0.966638 0.993264 0.791131 20418 1 76 0.00269158 130 0 6.18729e+07 0.0327772 256223 6.22924e+07 5.62802e+06 20439 3.07801e+07 0 0.175507 0.993264 0.785802 6.18729e+07 0.00322053 1.37403e+07 1.03688e+07 1.38083e+07 122 1.39068e+07 1.39471e+07 0.0029555 1.37693e+07 49.7515 0.00411323 0.99535 0 50.1235 GTEX-XYKS-0003-SM-4YUVD B1 Blood Whole Blood 0013756 -107 BP-32843,BP-32844 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/05/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-XYKS-0003-SM-53IUK B1 Blood Whole Blood 0013756 -107 BP-32843,BP-32844 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/05/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-XYKS-0003-SM-5JK4D B1 Blood Whole Blood 0013756 -107 BP-32843,BP-32844 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/05/2012 LCSET-5036 03/09/2014 PCR+ 30x Coverage WGS (HiSeq2000) WGS GTEX-XYKS-0005-SM-4BRUD B1 7.4 Blood Whole Blood 0013756 -107 BP-32880 RNA isolation_PAXgene Blood RNA (Manual) 11/06/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.983145 826004 0.96448 0.985657 0.806502 19392 1 76 0.0026125 116 0 8.56728e+07 0.0338184 185438 8.69195e+07 9.15292e+06 19398 4.25363e+07 0 0.157978 0.985657 0.794935 8.56728e+07 0.0038261 1.94489e+07 1.02366e+08 1.97776e+07 142 1.98054e+07 2.13681e+07 0.00321776 1.96461e+07 49.798 0.00213345 0.988169 0 50.419 GTEX-XYKS-0008-SM-4BRW6 B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 222 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992956 393498 0.976563 0.99453 0.850274 20439 1 76 0.00221339 131 0 6.39084e+07 0.0230869 195826 6.42599e+07 5.82434e+06 20452 3.18377e+07 0 0.126289 0.99453 0.845623 6.39084e+07 0.00268996 1.42941e+07 7.72062e+06 1.43836e+07 133 1.44408e+07 1.58439e+07 0.00245129 1.43342e+07 49.8148 0.00304741 0.996104 0 50.156 GTEX-XYKS-0226-SM-4BRW3 1 B1 2 pieces, 14x12 & 11x10mm; muscle content <50% in one due to fibroadipose interstitium; muscle 70% in other 8.8 Heart Heart - Atrial Appendage 0006631 163 1115 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.993292 425689 0.97584 0.995019 0.846353 20838 1 76 0.00248821 124 0 6.76148e+07 0.0238616 950948 6.79533e+07 6.63763e+06 20846 3.36819e+07 0 0.129486 0.995019 0.842138 6.76148e+07 0.00303102 1.42036e+07 1.04341e+07 1.43003e+07 160 1.42409e+07 1.20665e+07 0.00275914 1.43676e+07 50.2214 0.0139941 0.996747 0 50.1695 GTEX-XYKS-0426-SM-4BRW4 1 B1 6 pieces, up to 10x2mm; up to 1.8 mm adventitial adipose in 3 pieces 8 Blood Vessel Artery - Aorta 0001496 173 1106 BP-34479 RNA isolation_PAXgene Tissue miRNA 12/18/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.992131 455886 0.972394 0.993915 0.836319 22181 1 76 0.00241968 141 0 6.91786e+07 0.0271941 220329 6.96021e+07 6.7027e+06 22194 3.44516e+07 0 0.136075 0.993915 0.83123 6.91786e+07 0.00312055 1.50713e+07 8.41391e+06 1.51467e+07 156 1.5165e+07 1.34943e+07 0.00276949 1.51759e+07 50.0179 0.00316555 0.995698 0 50.1249 GTEX-XYKS-0526-SM-4BRW2 1 B1 2 pieces, 8x7 & 9x7mm; 7.1 Lung Lung 0008952 174 1106 BP-34730 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989375 417788 0.968855 0.991893 0.784278 24133 1 76 0.00266646 159 0 7.55393e+07 0.0308304 532720 7.61567e+07 7.74934e+06 24160 3.75825e+07 0 0.184577 0.991893 0.77792 7.55393e+07 0.00338822 1.6619e+07 8.65577e+06 1.68175e+07 177 1.67907e+07 1.12156e+07 0.00302642 1.68276e+07 50.0549 0.00699505 0.994412 0 50.2969 GTEX-XYKS-0826-SM-4BRVF 1 B1 2 pieces, 9x7 & 8x8mm; 20% external adipose 8.6 Thyroid Thyroid 0002046 195 1087 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989515 465262 0.969778 0.992443 0.790492 22949 1 76 0.00250754 130 0 6.83557e+07 0.0299375 490538 6.88762e+07 6.99558e+06 22975 3.39952e+07 0 0.179286 0.992443 0.784518 6.83557e+07 0.00322056 1.52016e+07 7.63811e+06 1.53131e+07 149 1.53914e+07 1.16141e+07 0.002863 1.53128e+07 49.8721 0.00712203 0.995371 0 50.1827 GTEX-XYKS-0926-SM-4BRVG 1 B1 2 pieces, 17x5 & 17x14mm; 10-20% extraadrenal adipose 8.5 Adrenal Gland Adrenal Gland 0002369 196 1086 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990543 355069 0.975992 0.99334 0.839682 21674 1 76 0.00251698 128 0 6.38349e+07 0.0236526 1.33351e+06 6.42629e+07 6.25554e+06 21689 3.1752e+07 0 0.13631 0.99334 0.83409 6.38349e+07 0.00323781 1.41021e+07 8.44497e+06 1.41956e+07 152 1.42156e+07 1.08306e+07 0.00287638 1.42447e+07 50.0512 0.0207509 0.996137 0 50.1653 GTEX-XYKS-1026-SM-4BRVH 1 B1 6 pieces, up to 15x6mm; 5 muscularis (target); 1 muscle and fibrous stroma 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 197 1086 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.989227 474654 0.969599 0.991949 0.795914 22167 1 76 0.00254718 136 0 6.78133e+07 0.0301863 556562 6.83637e+07 6.96246e+06 22183 3.37316e+07 0 0.173685 0.991949 0.789506 6.78133e+07 0.00332372 1.45878e+07 8.32416e+06 1.47391e+07 155 1.47304e+07 1.04117e+07 0.00293439 1.47699e+07 50.067 0.00814119 0.994671 0 50.258 GTEX-XYKS-1126-SM-4BRWP 1 B1 6 pieces, up to 8x4mm; 3 muscularis only; 2 mucosa only; 1 fibromuscular tissue 8.2 Esophagus Esophagus - Muscularis 0004648 206 1079 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.988006 402532 0.966212 0.990539 0.861856 21441 1 76 0.00400196 200 0 8.25916e+07 0.0336364 789758 8.33805e+07 8.65464e+06 21453 4.10835e+07 0 0.104355 0.990539 0.853702 8.25916e+07 0.00462853 1.74022e+07 9.56099e+06 1.76872e+07 251 1.75522e+07 9.71307e+06 0.00431444 1.77284e+07 50.2497 0.00947174 0.993071 0 50.4062 GTEX-XYKS-1226-SM-4BRVI 1 B1 2 pieces, 8x7 & 11x5mm; mild-moderate interstitial fibrosis 7.7 Pancreas Pancreas 0001150 197 1089 BP-34738 RNA isolation_PAXgene Tissue miRNA 12/27/2012 LCSET-3152,LCSET-3618 07/23/2013 TruSeq.v1 RNASEQ 0.991378 748376 0.971073 0.992874 0.806437 24382 1 76 0.00226819 162 0 9.99353e+07 0.0286985 530879 1.00653e+08 6.65766e+06 24420 4.97496e+07 0 0.164636 0.992874 0.80069 9.99353e+07 0.00284349 2.24858e+07 2.03088e+07 2.2677e+07 199 2.27108e+07 2.21571e+07 0.00255541 2.26031e+07 49.8812 0.00527437 0.99437 0 50.2116 GTEX-XYKS-1326-SM-4BRUN 1 B1 2 pieces, 11x9 & 11x9mm; ducts, no lobules, atrophic 7.1 Breast Breast - Mammary Tissue 0008367 201 1085 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990549 457251 0.971164 0.992844 0.859451 23029 1 76 0.00301576 160 0 7.18956e+07 0.0283313 293960 7.24139e+07 6.7663e+06 23041 3.57595e+07 0 0.111713 0.992844 0.8533 7.18956e+07 0.00378486 1.56716e+07 9.49012e+06 1.58081e+07 178 1.57817e+07 1.24219e+07 0.00339942 1.5861e+07 50.1255 0.00405944 0.995138 0 50.2169 GTEX-XYKS-1426-SM-4BRUO 1 B1 6 pieces, up to 6x3mm; well trimmed 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 204 1083 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990408 550588 0.972861 0.992597 0.835254 23079 1 76 0.00242724 182 0 7.84281e+07 0.026898 639878 7.9013e+07 7.00826e+06 23096 3.9024e+07 0 0.137607 0.992597 0.829071 7.84281e+07 0.00331663 1.72028e+07 1.00519e+07 1.73048e+07 190 1.73188e+07 1.43626e+07 0.00287095 1.7362e+07 50.0623 0.00809838 0.994787 0 50.1478 GTEX-XYKS-1526-SM-4BRUP 1 B1 5 pieces, up to 8x3mm; all have mucosa 7.8 Esophagus Esophagus - Mucosa 0006920 206 1081 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.990155 365922 0.977264 0.992312 0.844515 22412 1 76 0.00252668 162 0 7.46736e+07 0.0223123 546017 7.52522e+07 7.37994e+06 22424 3.71724e+07 0 0.132749 0.992312 0.838022 7.46736e+07 0.00325954 1.67498e+07 1.09179e+07 1.68978e+07 171 1.69301e+07 1.51788e+07 0.00289231 1.68756e+07 49.9194 0.00725583 0.994468 0 50.2199 GTEX-XYKS-1626-SM-4BRUQ 1 B1 2 pieces, 8x8 & 8x7mm; 1 has 3 areas of endometrium cut obliquely; other is only myometrium in this section 8.2 Uterus Uterus 0000995 208 1080 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991448 467524 0.970759 0.993443 0.788699 23532 1 76 0.00245124 166 0 7.91785e+07 0.0289577 174880 7.97012e+07 7.58298e+06 23562 3.94167e+07 0 0.182061 0.993443 0.783527 7.91785e+07 0.00313765 1.73565e+07 8.18598e+06 1.74801e+07 174 1.75099e+07 1.43698e+07 0.00279376 1.74808e+07 49.9584 0.0021942 0.995438 0 50.1773 GTEX-XYKS-1726-SM-4E3IO 0 B1 2 pieces, 8x6.5 & 10x10mm; corpora albicans; atrophic 7.8 Ovary Ovary 0000992 210 1078 BP-34799 RNA isolation_PAXgene Tissue miRNA 01/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986343 602850 0.969084 0.990309 0.786667 22931 1 76 0.00263864 174 0 8.64513e+07 0.0306624 165579 8.72973e+07 1.0235e+07 22964 4.29421e+07 0 0.182416 0.990309 0.779044 8.64513e+07 0.00391041 1.89995e+07 1.2388e+07 1.91323e+07 186 1.92367e+07 1.61913e+07 0.00327198 1.92328e+07 49.9949 0.00189673 0.994275 0 50.1741 GTEX-XYKS-1826-SM-4E3JV 0 B1 2 pieces, 13x10 & 16x10.5mm; 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 211 1078 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985835 679072 0.972138 0.989184 0.826941 23278 1 76 0.00325775 163 0 8.11223e+07 0.0258629 350272 8.20093e+07 9.16014e+06 23308 4.02302e+07 0 0.145197 0.989184 0.817997 8.11223e+07 0.0046466 1.79874e+07 1.41585e+07 1.80774e+07 180 1.81876e+07 1.49775e+07 0.00394982 1.81496e+07 49.9477 0.00427113 0.992533 0 50.1247 GTEX-XYKS-2126-SM-4E3IB 1 B1 6 pieces, up to 9x5mm; up to 2mm of subcutaneous adipose with several large vessels 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 218 1073 BP-34929 RNA isolation_PAXgene Tissue miRNA 01/09/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985901 684946 0.969162 0.988897 0.835124 23480 1 76 0.00271018 231 0 9.02145e+07 0.0305205 1.2233e+06 9.12274e+07 1.01936e+07 23509 4.48494e+07 0 0.134037 0.988897 0.825851 9.02145e+07 0.00420766 1.96143e+07 1.7163e+07 1.96653e+07 212 1.97398e+07 1.73422e+07 0.00345665 1.98192e+07 50.1003 0.0134093 0.991892 0 50.065 GTEX-XYKS-2226-SM-4E3IU 2 B1 6 pieces, up to 10x5.5mm; 5 have mucosa 6.9 Colon Colon - Transverse 0001157 224 1068 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.985639 506881 0.97058 0.989578 0.793676 23987 1 76 0.00290516 169 0 8.09588e+07 0.0290827 1.39458e+06 8.18115e+07 9.22802e+06 24020 4.02097e+07 0 0.176904 0.989578 0.785404 8.09588e+07 0.00474565 1.77645e+07 1.14189e+07 1.79132e+07 193 1.7937e+07 1.14803e+07 0.00382174 1.80453e+07 50.1505 0.0170463 0.993518 0 50.2084 GTEX-XYKS-2426-SM-4AT43 1 B1 2 pieces, 12x6 & 10x9mm; 5% internal adipose 8 Muscle Muscle - Skeletal 0011907 222 1071 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-3137 05/15/2013 TruSeq.v1 RNASEQ 0.990541 331182 0.974966 0.992579 0.850956 20237 1 76 0.00196436 145 0 6.73925e+07 0.0248046 1.21128e+06 6.78964e+07 6.16235e+06 20248 3.3558e+07 0 0.12401 0.992579 0.844641 6.73925e+07 0.00267941 1.47642e+07 8.01498e+06 1.49371e+07 155 1.49416e+07 1.38099e+07 0.00232115 1.48907e+07 49.9147 0.0178402 0.994616 0 50.2912 GTEX-XYKS-2526-SM-4BOPX 1 B1 2 pieces, 5x4 & 6x4mm; 25% adherent adipose 7 Nerve Nerve - Tibial 0001323 233 1060 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-3145,LCSET-3730 08/01/2013 TruSeq.v1 RNASEQ 0.988008 416590 0.961324 0.989907 0.731751 23528 1 76 0.00227649 134 0 6.784e+07 0.0384221 280885 6.85316e+07 3.9993e+06 23563 3.37596e+07 0 0.229573 0.989907 0.724366 6.784e+07 0.00285399 1.48054e+07 1.14547e+07 1.49182e+07 146 1.49213e+07 1.02313e+07 0.00256469 1.49329e+07 50.0194 0.00409862 0.991806 0 50.1897 GTEX-XYKS-2626-SM-4BRUT 1 B1 2 pieces, 4x3 & 6x4mm; 1 has artery + 2 veins and 30% adherent stroma; other artery is fragmented; both contain medial calcification 8.2 Blood Vessel Artery - Tibial 0007610 236 1058 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-3152 05/27/2013 TruSeq.v1 RNASEQ 0.991871 474706 0.969823 0.993695 0.822497 21127 1 76 0.00235954 118 0 5.49691e+07 0.0297879 217797 5.53179e+07 4.93796e+06 21138 2.73579e+07 0 0.147327 0.993695 0.817311 5.49691e+07 0.00304513 1.18617e+07 6.29014e+06 1.19055e+07 123 1.19201e+07 1.07257e+07 0.00270171 1.19512e+07 50.0652 0.00393719 0.995518 0 50.0921 GTEX-XYKS-2726-SM-4E3IC 1 B1 2 pieces, 12x11 & 11x8mm; 1 has ~15% nerve and blood vessels 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 239 1055 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.986279 476606 0.97582 0.990335 0.840374 23362 1 76 0.00261451 206 0 8.61237e+07 0.0238801 408236 8.69642e+07 1.01279e+07 23384 4.27852e+07 0 0.135446 0.990335 0.832252 8.61237e+07 0.00444904 1.89132e+07 9.79808e+06 1.90833e+07 203 1.91617e+07 1.6813e+07 0.00352802 1.91725e+07 50.0141 0.0046943 0.994391 0 50.2239 GTEX-XYKS-2926-SM-4E3IA 1 B1 2 pieces, 3x2 & 2x2mm; 1 w/ 3, 0.5mm salivary glands; other no glands, only muscle and nerves 7.4 Salivary Gland Minor Salivary Gland 0006330 246 1050 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 EXCLUDE 0.988396 556209 0.971328 0.991384 0.835386 23250 1 76 0.00257457 205 0 9.0089e+07 0.0283068 329862 9.08719e+07 9.90711e+06 23271 4.47862e+07 0 0.135942 0.991384 0.828189 9.0089e+07 0.00388455 1.95037e+07 1.06772e+07 1.95875e+07 215 1.96122e+07 1.73013e+07 0.00322759 1.97507e+07 50.1759 0.00362997 0.994373 0 50.1072 GTEX-Y111-0001-SM-4YUXE B1 Blood Whole Blood 0013756 1274 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 GTEx_Option_1_OM25_01 10/26/2013 Illumina OMNI SNP Array OMNI GTEX-Y111-0001-SM-53IVB B1 Blood Whole Blood 0013756 1274 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Y111-0001-SM-6UH1B B1 Blood Whole Blood 0013756 1274 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y111-0006-SM-4SOIO B1 8.3 Blood Whole Blood 0013756 1273 BP-33168 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2012 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.98173 635170 0.964518 0.984536 0.771135 19554 1 76 0.00280329 119 0 6.95766e+07 0.0343381 226465 7.06695e+07 4.12838e+06 19565 3.45321e+07 0 0.193383 0.984536 0.75921 6.95766e+07 0.00365046 1.551e+07 6.07962e+07 1.58251e+07 125 1.58408e+07 1.46509e+07 0.00322567 1.57116e+07 49.7953 0.00320456 0.987341 0 50.5027 GTEX-Y111-0008-SM-4SOJ3 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1398 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.99171 845551 0.94625 0.99392 0.834666 19283 1 76 0.00185813 121 0 5.79751e+07 0.0533815 322936 5.83297e+07 3.1728e+06 19289 2.88601e+07 0 0.111584 0.99392 0.829592 5.79751e+07 0.00227919 1.25047e+07 2.6933e+07 1.26786e+07 122 1.27092e+07 1.39978e+07 0.00206819 1.26129e+07 49.8099 0.00553639 0.996131 0 50.3454 GTEX-Y111-0126-SM-4SOIV 2 B1 6 pieces, up to 11.5x4mm; 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 1399 1157 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.991031 508970 0.969635 0.993112 0.818106 23818 1 76 0.00223433 220 0 8.44349e+07 0.0301095 494672 8.50205e+07 4.60484e+06 23843 4.19952e+07 0 0.151529 0.993112 0.812471 8.44349e+07 0.00292466 1.84654e+07 1.18157e+07 1.85361e+07 220 1.84911e+07 1.42678e+07 0.00257877 1.86877e+07 50.2644 0.00581827 0.995193 0 50.0955 GTEX-Y111-0226-SM-4SOIW 1 B1 2 pieces, 11x7 & 12x8mm; 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1400 1157 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.987766 802348 0.970435 0.991261 0.820118 23060 1 76 0.00220004 210 0 8.49893e+07 0.0291865 473517 8.57386e+07 4.83088e+06 23082 4.22108e+07 0 0.150317 0.991261 0.812952 8.49893e+07 0.00283504 1.8532e+07 1.23729e+07 1.8711e+07 223 1.87651e+07 1.42975e+07 0.00251642 1.87789e+07 50.0183 0.0055228 0.994756 0 50.2402 GTEX-Y111-0326-SM-4SOIX 1 B1 2 pieces, 9x8 & 8x6mm; 10% internal adipose 8.1 Muscle Muscle - Skeletal 0011907 1407 1151 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990471 643201 0.976874 0.993502 0.871027 20227 1 76 0.00189391 199 0 9.20196e+07 0.0229209 1.25852e+06 9.26214e+07 4.98625e+06 20240 4.57683e+07 0 0.105848 0.993502 0.865367 9.20196e+07 0.00250684 1.99695e+07 1.42144e+07 2.0117e+07 254 2.01251e+07 1.80611e+07 0.00219944 2.02222e+07 50.1204 0.0135878 0.996533 0 50.184 GTEX-Y111-0426-SM-4TT3K 1 B1 2 pieces, 5x3 & 5x2mm; specimens are both arteries with 40% adipose 7.7 Blood Vessel Artery - Tibial 0007610 1414 1144 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991598 600409 0.974255 0.993494 0.844781 22344 1 76 0.00233649 277 0 9.77932e+07 0.0253233 412499 9.84335e+07 7.93658e+06 22366 4.86459e+07 0 0.129474 0.993494 0.839285 9.77932e+07 0.00296044 2.10344e+07 9.35389e+06 2.11355e+07 265 2.10934e+07 1.90615e+07 0.00264787 2.12548e+07 50.1906 0.00419063 0.995391 0 50.1198 GTEX-Y111-0526-SM-4TT3M 1 B1 2 pieces, 6x3 & 4x3mm; specimens are both nerve 6.7 Nerve Nerve - Tibial 0001323 1416 1142 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989725 586181 0.967248 0.991654 0.783114 24636 1 76 0.00250666 222 0 9.47011e+07 0.0324251 459262 9.5498e+07 8.20854e+06 24681 4.70471e+07 0 0.184134 0.991654 0.776578 9.47011e+07 0.00319661 2.0802e+07 9.6402e+06 2.0908e+07 240 2.08966e+07 1.52161e+07 0.00285096 2.09893e+07 50.1106 0.00480913 0.993584 0 50.1271 GTEX-Y111-0626-SM-4SOIT 1 B1 6 pieces, up to 8.5x3mm; 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1472 1087 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.987984 531758 0.966182 0.990869 0.788032 22632 1 76 0.00227123 170 0 7.19753e+07 0.0335963 544438 7.26386e+07 4.14323e+06 22659 3.57518e+07 0 0.17815 0.990869 0.780837 7.19753e+07 0.00289853 1.57359e+07 1.31776e+07 1.58264e+07 179 1.58061e+07 1.09084e+07 0.00258397 1.59679e+07 50.2545 0.00749516 0.993754 0 50.1435 GTEX-Y111-0726-SM-EYYVM 1 B1 2 pieces, 9x8 & 10x8mm; 1 piece contains capsule 5.6 Liver Liver 0001114 1476 1088 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.985657 178743 0.970605 0.988153 0.837068 21091 1 76 0.00203808 195 0 7.12592e+07 0.0292669 1.86352e+06 7.21136e+07 2.80448e+06 21106 3.54587e+07 0 0.133536 0.988153 0.827152 7.12592e+07 0.00307167 1.55672e+07 1.0413e+07 1.57777e+07 250 1.57085e+07 7.70228e+06 0.00255357 1.57742e+07 50.1044 0.0258415 0.990649 0 50.3358 GTEX-Y111-0926-SM-4SOIU 1 B1 2 pieces, 9.5x8 & 10x9mm; 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1485 1076 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990687 555342 0.96914 0.992694 0.818948 23272 1 76 0.00232423 163 0 7.38011e+07 0.0302436 567169 7.43443e+07 3.99187e+06 23296 3.6684e+07 0 0.150192 0.992694 0.812964 7.38011e+07 0.00293471 1.61869e+07 1.19349e+07 1.63076e+07 196 1.62851e+07 1.12437e+07 0.00262885 1.63655e+07 50.1232 0.00762895 0.9947 0 50.1858 GTEX-Y111-1026-SM-4TT22 2 B1 2 pieces, 10.5x9 & 11x8mm. Extensive congestion and hemorrhage. 2 mm infarct. 3 mm bronchus, lymph node and vessels occupy 40% of 1 piece 7.4 Lung Lung 0008952 1485 1076 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989248 905886 0.961697 0.990967 0.766464 25873 1 76 0.00281299 278 0 1.07414e+08 0.0377438 396078 1.08393e+08 8.93548e+06 25913 5.33636e+07 0 0.195234 0.990967 0.75954 1.07414e+08 0.00339005 2.35808e+07 2.27704e+07 2.34877e+07 301 2.35001e+07 1.73561e+07 0.00310102 2.37664e+07 50.2817 0.00365409 0.992686 0 49.9011 GTEX-Y111-1626-SM-57WCY 2 B1 6 pieces, up to 6x5mm; well dissected mucosa 6.5 Esophagus Esophagus - Mucosa 0006920 1515 1049 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987217 357687 0.96838 0.990739 0.78489 23072 1 76 0.00198647 126 0 6.00312e+07 0.0314274 499838 6.05923e+07 7.36352e+06 23092 2.98267e+07 0 0.18349 0.990739 0.777622 6.00312e+07 0.00406706 1.32943e+07 8.08308e+06 1.3402e+07 145 1.34308e+07 9.29868e+06 0.00302307 1.3471e+07 50.0748 0.0082492 0.994262 0 50.2017 GTEX-Y111-1726-SM-4SOIQ 1 B1 6 pieces, up to 10x4mm; well dissected muscularis 5.7 Esophagus Esophagus - Muscularis 0004648 1517 1047 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988924 546214 0.958944 0.99105 0.779416 23045 1 76 0.00230717 162 0 7.20501e+07 0.0408764 1.64924e+06 7.27008e+07 3.94831e+06 23071 3.58209e+07 0 0.179527 0.99105 0.77244 7.20501e+07 0.00292089 1.54397e+07 1.24713e+07 1.55926e+07 194 1.55403e+07 8.56283e+06 0.00261337 1.56481e+07 50.1729 0.0226853 0.993175 0 50.2463 GTEX-Y111-1826-SM-4SOIR 1 B1 6 pieces, up to 9x3mm. 3 with 10- 40% adipose 6 Esophagus Esophagus - Gastroesophageal Junction 0004550 1523 1041 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.987998 530109 0.95978 0.990867 0.77441 23117 1 76 0.00230444 148 0 6.79936e+07 0.040015 1.08626e+06 6.86203e+07 3.71472e+06 23142 3.37687e+07 0 0.18537 0.990867 0.767337 6.79936e+07 0.00300858 1.45618e+07 1.03085e+07 1.46708e+07 174 1.46465e+07 8.69766e+06 0.00265549 1.47794e+07 50.2258 0.01583 0.993736 0 50.1865 GTEX-Y111-1926-SM-4SOIS 2 B1 2 pieces, 10x9 & 12x8mm; smaller piece is 60% fibroadipose tissue 6.3 Thyroid Thyroid 0002046 1525 1040 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988842 458727 0.963188 0.991438 0.797868 23703 1 76 0.00222268 149 0 6.59703e+07 0.0364384 328344 6.65399e+07 3.7417e+06 23731 3.27764e+07 0 0.16532 0.991438 0.791037 6.59703e+07 0.00276857 1.43666e+07 1.03995e+07 1.44515e+07 155 1.44664e+07 1.15886e+07 0.00249491 1.45252e+07 50.1013 0.00493454 0.994034 0 50.1473 GTEX-Y111-2026-SM-4SOJA 2 B1 2 pieces, 7x6 & 12x7mm; several ducts in smaller piece. 6.4 Breast Breast - Mammary Tissue 0008367 1530 1035 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988964 428306 0.96711 0.991515 0.757509 23481 1 76 0.00233261 142 0 6.11604e+07 0.0326257 504014 6.16838e+07 3.3748e+06 23506 3.0383e+07 0 0.209601 0.991515 0.751081 6.11604e+07 0.00303804 1.34436e+07 9.21553e+06 1.35532e+07 157 1.3537e+07 7.97019e+06 0.00268442 1.36167e+07 50.1468 0.00817092 0.994065 0 50.2029 GTEX-Y111-2226-SM-4SOJB 2 B1 6 pieces, up to 9x3mm; lymphoid tissue abundant (autolysis=2); mucosa autolyzed=3; all pieces have abundant muscularis (not the target) 5.7 Small Intestine Small Intestine - Terminal Ileum 0001211 1542 1024 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.984278 584316 0.962333 0.986762 0.804701 24472 1 76 0.00225439 375 0 1.00847e+08 0.0373639 1.60137e+06 1.022e+08 5.77597e+06 24511 5.01228e+07 0 0.157632 0.986762 0.794048 1.00847e+08 0.0027387 2.16447e+07 1.54812e+07 2.19315e+07 346 2.18849e+07 1.41682e+07 0.00249594 2.19361e+07 50.0585 0.015669 0.989247 0 50.3291 GTEX-Y111-2426-SM-4TT23 2 B1 1 piece, 10x6mm; 7.4 Testis Testis 0000473 1552 1015 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989441 1.31746e+06 0.9 0.991324 0.684414 33980 1 76 0.00250699 226 0 1.05511e+08 0.0996366 817477 1.06434e+08 8.37174e+06 34062 5.24912e+07 0 0.215586 0.991324 0.678476 1.05511e+08 0.0030817 2.12006e+07 4.17588e+07 2.13327e+07 216 2.14158e+07 1.66243e+07 0.00279379 2.13134e+07 49.8802 0.00768057 0.993207 0 50.1553 GTEX-Y111-2626-SM-4TT24 1 B1 3 pieces, up to 3.5x2mm. Well dissected with minimal adipose. 7.9 Salivary Gland Minor Salivary Gland 0006330 1567 1007 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989817 687056 0.969658 0.991748 0.803385 24958 1 76 0.00264647 431 0 1.12901e+08 0.0294951 477966 1.13841e+08 9.30293e+06 25005 5.61272e+07 0 0.166273 0.991748 0.796756 1.12901e+08 0.00336679 2.52985e+07 2.52077e+07 2.56191e+07 372 2.56807e+07 1.93502e+07 0.00300593 2.54547e+07 49.779 0.00419856 0.993679 0 50.3148 GTEX-Y111-2726-SM-4TT3N 2 B1 2 pieces, 8x5 & 8x7mm. Up to 1 mm meninges on 1 piece. 5.9 Brain Brain - Cortex 0001870 1668 906 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989873 1.5437e+06 0.956523 0.992275 0.831003 25396 1 76 0.00232409 519 0 1.56342e+08 0.0431135 5.8948e+06 1.57559e+08 1.30266e+07 25420 7.76853e+07 0 0.12552 0.992275 0.824584 1.56342e+08 0.00310787 3.39429e+07 5.22969e+07 3.42888e+07 501 3.41489e+07 1.79575e+07 0.00271503 3.44502e+07 50.2196 0.0374134 0.994677 0 50.2534 GTEX-Y111-2826-SM-4TT3O 2 B1 3 pieces, up to 10x7mm; 6.1 Brain Brain - Cerebellum 0002037 1669 906 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.987443 1.09392e+06 0.932255 0.989592 0.704435 24406 1 76 0.00272452 206 0 9.84585e+07 0.0674201 1.43251e+06 9.94941e+07 8.74666e+06 24444 4.88507e+07 0 0.22782 0.989592 0.697103 9.84585e+07 0.00353463 2.09619e+07 3.53389e+07 2.11437e+07 243 2.11864e+07 1.14597e+07 0.0031287 2.11238e+07 49.926 0.0143979 0.99174 0 50.2159 GTEX-Y111-2926-SM-4TT25 2 B1 2 pieces, 7x5 & 12x7.5mm. 1 piece has 50% posterior pituitary. 8.1 Pituitary Pituitary 0000007 1672 904 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.990096 1.10745e+06 0.951705 0.992045 0.758794 26104 1 76 0.00253255 169 0 8.48532e+07 0.0479557 711734 8.55337e+07 7.00222e+06 26149 4.21575e+07 0 0.192911 0.992045 0.752758 8.48532e+07 0.00326382 1.83313e+07 2.1393e+07 1.83102e+07 196 1.83317e+07 1.30969e+07 0.00289747 1.85002e+07 50.2288 0.0083211 0.993994 0 49.9712 GTEX-Y114-0002-SM-4TT78 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -221 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.987506 2.38724e+06 0.908884 0.989999 0.7446 21578 1 76 0.00286015 211 0 1.02308e+08 0.0904002 824309 1.03341e+08 9.74102e+06 21609 5.08914e+07 0 0.164283 0.989999 0.737154 1.02308e+08 0.00386288 2.11952e+07 8.61576e+07 2.15938e+07 205 2.17071e+07 2.10332e+07 0.00336025 2.13551e+07 49.5912 0.00797657 0.992492 0 50.4659 GTEX-Y114-0004-SM-4YUWP B1 Blood Whole Blood 0013756 -221 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 GTEx_Option_1_OM25_01 10/26/2013 Illumina OMNI SNP Array OMNI GTEX-Y114-0004-SM-53IUE B1 Blood Whole Blood 0013756 -221 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) EXCLUDE GTEX-Y114-0004-SM-6UH1A B1 Blood Whole Blood 0013756 -221 BP-33096 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/13/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y114-0006-SM-4TT76 B1 7.6 Blood Whole Blood 0013756 -221 BP-33168 RNA isolation_PAXgene Blood RNA (Manual) 11/15/2012 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.97728 3.88646e+06 0.843768 0.980235 0.663219 20565 1 76 0.0030189 128 0 8.71671e+07 0.155451 436882 8.89247e+07 9.24427e+06 20585 4.32853e+07 0 0.18055 0.980235 0.650111 8.71671e+07 0.00464179 1.66306e+07 1.59561e+08 1.70908e+07 141 1.72548e+07 1.45787e+07 0.0038279 1.68077e+07 49.3436 0.00491295 0.98319 0 50.6822 GTEX-Y114-0008-SM-4TT8X B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 227 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.99138 1.3502e+06 0.943704 0.993416 0.810147 22681 1 76 0.00244229 283 0 1.10967e+08 0.0559107 406997 1.11703e+08 1.00282e+07 22708 5.5258e+07 0 0.133558 0.993416 0.804813 1.10967e+08 0.00325445 2.39104e+07 5.44568e+07 2.41659e+07 274 2.4238e+07 2.52635e+07 0.00284754 2.40706e+07 49.8268 0.00364357 0.995452 0 50.2657 GTEX-Y114-0126-SM-4TT8K 1 B1 2 pieces 7.5x8 & 6.5x6; no significant fibrosis 8.4 Heart Heart - Atrial Appendage 0006631 91 603 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.991566 717934 0.963582 0.993743 0.81952 22269 1 76 0.0031096 267 0 9.69802e+07 0.0361929 1.96688e+06 9.75908e+07 9.28736e+06 22283 4.8303e+07 0 0.144061 0.993743 0.814393 9.69802e+07 0.00395813 2.04375e+07 3.1872e+07 2.06521e+07 286 2.04201e+07 1.34777e+07 0.00353294 2.08682e+07 50.5427 0.0201544 0.995921 0 50.2611 GTEX-Y114-0226-SM-4TT8W 1 B1 2 pieces 9x7 & 13x9mm; minimal ischemic changes 8.4 Heart Heart - Left Ventricle 0006566 93 601 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.991026 776702 0.973404 0.993352 0.844399 21834 1 76 0.00309668 371 0 1.253e+08 0.0263754 3.08213e+06 1.26138e+08 1.24966e+07 21850 6.23942e+07 0 0.129005 0.993352 0.838786 1.253e+08 0.00391 2.70901e+07 3.99148e+07 2.74099e+07 333 2.72946e+07 1.91393e+07 0.00350239 2.74629e+07 50.1537 0.0244345 0.995678 0 50.2934 GTEX-Y114-0326-SM-4TT99 1 B1 2 pieces, 6x4.5 & 7x5mm; nubbins of adherent fat on both, up to ~2.5mm, delineated. 40-50% occlusive atherosclerosis, focally calcified 6.6 Blood Vessel Artery - Coronary 0001621 95 599 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.988257 603185 0.962818 0.991296 0.818334 22323 1 76 0.00280989 159 0 7.65478e+07 0.0368376 349432 7.72199e+07 7.72299e+06 22339 3.80536e+07 0 0.144484 0.991296 0.811212 7.65478e+07 0.0041649 1.62451e+07 1.51278e+07 1.63805e+07 178 1.63628e+07 1.31561e+07 0.00348532 1.64959e+07 50.2026 0.00452516 0.994336 0 50.2074 GTEX-Y114-0426-SM-4TT6V 1 B1 6pieces, up to 7x2mm; 7.6 Blood Vessel Artery - Aorta 0001496 97 597 BP-34830 RNA isolation_PAXgene Tissue miRNA 01/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.984353 749343 0.962633 0.987331 0.818436 22259 1 76 0.00272437 210 0 9.20142e+07 0.0370751 290149 9.31949e+07 9.01087e+06 22277 4.57455e+07 0 0.144197 0.987331 0.808068 9.20142e+07 0.00414911 1.95334e+07 1.85165e+07 1.96878e+07 232 1.96821e+07 1.55682e+07 0.00343459 1.98207e+07 50.1754 0.00311336 0.990309 0 50.1969 GTEX-Y114-0526-SM-4TT8V 1 B1 2 pieces, 17x12 & 18x14mm; 99% cortex, 1% medulla (delineated). Remarkably well preserved, adherent fat ~30% of both aliquots up to 3mm thick 9.1 Adrenal Gland Adrenal Gland 0002369 100 594 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.991384 833199 0.961566 0.993608 0.822821 23144 1 76 0.00293062 272 0 1.05999e+08 0.0380614 1.709e+06 1.06681e+08 1.03138e+07 23171 5.27702e+07 0 0.138746 0.993608 0.817561 1.05999e+08 0.00376804 2.30667e+07 3.22211e+07 2.3187e+07 298 2.31934e+07 1.79302e+07 0.00334839 2.32824e+07 50.0957 0.0160197 0.995832 0 50.13 GTEX-Y114-0626-SM-4TT98 1 B1 2 pieces, 11x7 & 7x5.5mm; 1mm colloid cyst in one aliquot, delineated. 2x1mm focus of fibrous tissue in other aliquot, delineated 7.8 Thyroid Thyroid 0002046 88 606 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989474 595603 0.957848 0.991965 0.732057 24504 1 76 0.00281738 166 0 8.48866e+07 0.0418643 288585 8.55742e+07 8.23933e+06 24546 4.22361e+07 0 0.225791 0.991965 0.726175 8.48866e+07 0.00376417 1.84157e+07 1.69516e+07 1.8493e+07 179 1.85335e+07 1.33744e+07 0.00328959 1.85776e+07 50.0594 0.00337234 0.994457 0 50.1048 GTEX-Y114-0726-SM-4TT6U 1 B1 2 pieces, 10x7 & 14x7mm; milde congestion 8.3 Spleen Spleen 0002106 103 591 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.986175 1.03502e+06 0.949891 0.989261 0.700928 26734 1 76 0.00373082 271 0 1.18287e+08 0.047645 373175 1.19571e+08 1.16792e+07 26793 5.86357e+07 0 0.248962 0.989261 0.693401 1.18287e+08 0.00507032 2.56832e+07 3.62709e+07 2.57957e+07 262 2.59443e+07 1.66004e+07 0.00439848 2.5905e+07 49.9622 0.00312095 0.992347 0 50.1092 GTEX-Y114-0826-SM-4TT77 1 B1 2 pieces, 13x11 & 13.5x11mm; interstitial fibrosis s/o remote pancreatitis, Islets well- visualized, encircled (rep) 7.2 Pancreas Pancreas 0001150 113 581 BP-34869 RNA isolation_PAXgene Tissue miRNA 01/07/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.98938 1.40672e+06 0.939424 0.991997 0.798393 22668 1 76 0.0028664 132 0 9.80371e+07 0.0600817 327786 9.8828e+07 9.82362e+06 22689 4.87774e+07 0 0.141031 0.991997 0.792003 9.80371e+07 0.00402335 2.14405e+07 6.62238e+07 2.19142e+07 149 2.19056e+07 2.60405e+07 0.00344335 2.17271e+07 49.7955 0.00331673 0.994614 0 50.5462 GTEX-Y114-0926-SM-4TT7J 1 B1 6 pieces, up to 7x4mm; squamous mucosa 10-15% thickness, submucosal glands abundant, rep. ones encircled 9.5 Esophagus Esophagus - Mucosa 0006920 125 569 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.986673 2.55347e+06 0.941118 0.989097 0.761707 26328 1 76 0.0030085 400 0 2.06282e+08 0.0583007 1.17729e+06 2.08556e+08 2.10305e+07 26388 1.0264e+08 0 0.179412 0.989097 0.753402 2.06282e+08 0.00402456 4.47095e+07 1.18535e+08 4.5397e+07 384 4.55425e+07 3.74221e+07 0.00351529 4.50647e+07 49.7363 0.00564495 0.991521 0 50.3815 GTEX-Y114-1126-SM-4TT7V 1 B1 6 pieces, up to 6x4.5mm; all muscularis, good specimens 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 131 563 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.987633 1.47048e+06 0.929006 0.99065 0.723321 23220 1 76 0.00286037 172 0 8.96155e+07 0.0706588 451817 9.04613e+07 9.094e+06 23251 4.45563e+07 0 0.205685 0.99065 0.716558 8.96155e+07 0.00407098 1.84058e+07 4.92922e+07 1.86911e+07 185 1.87118e+07 1.39336e+07 0.00346383 1.8668e+07 49.9414 0.00499459 0.993668 0 50.3844 GTEX-Y114-1126-SM-CKJTJ 1 B1 6 pieces, up to 6x4.5mm; all muscularis, good specimens Esophagus Esophagus - Gastroesophageal Junction 0004550 131 563 BP-35074 DNA Isolation from Tissue via QIAgen Spin Column 01/14/2013 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-Y114-1226-SM-4TT88 1 B1 6 pieces, up to 8x6mm; well preserved. Marked chronic active gastritis with patchy intestinal metaplasia, gastropathic changes with foveolar hyperplasia, features suggest possible H pylori infection 8.3 Stomach Stomach 0000945 142 552 BP-35073 RNA isolation_PAXgene Tissue miRNA 01/14/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989489 1.59325e+06 0.931102 0.992049 0.766061 23543 1 76 0.00275629 210 0 9.34761e+07 0.0685688 540679 9.42253e+07 8.49123e+06 23573 4.65127e+07 0 0.165041 0.992049 0.75997 9.34761e+07 0.00395349 1.92731e+07 5.14473e+07 1.95439e+07 219 1.95502e+07 1.52089e+07 0.00335334 1.9524e+07 49.9664 0.00573815 0.994609 0 50.3488 GTEX-Y114-1326-SM-4TT9A 1 B1 2 pieces, 14x7 & 13.5x11mm; 8.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 145 549 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989292 1.23461e+06 0.94484 0.991985 0.784385 23139 1 76 0.00276124 212 0 9.02787e+07 0.0549165 440480 9.10081e+07 9.11936e+06 23162 4.49197e+07 0 0.160455 0.991985 0.778098 9.02787e+07 0.00388114 1.91618e+07 3.8711e+07 1.94236e+07 229 1.94528e+07 1.46032e+07 0.00331967 1.93854e+07 49.9132 0.00484001 0.994678 0 50.3392 GTEX-Y114-1426-SM-4TT6W 1 B1 6 pieces, 7.5x4mm; well prserved, ~40% lymphoid elements, rep. areas delineated. Superb specimen 8.4 Small Intestine Small Intestine - Terminal Ileum 0001211 154 540 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.988867 1.12601e+06 0.940077 0.991556 0.722743 25860 1 76 0.00315688 209 0 9.68079e+07 0.0595712 709299 9.76324e+07 9.67366e+06 25904 4.81514e+07 0 0.217334 0.991556 0.71664 9.68079e+07 0.00429 2.05732e+07 4.08581e+07 2.08573e+07 226 2.08456e+07 1.2536e+07 0.0037219 2.08414e+07 49.9949 0.007265 0.994244 0 50.3428 GTEX-Y114-1526-SM-4TT79 1 B1 6 pieces, up to 9.5x4mm; mucosa well preserved, mucosa ~5-10% thickness 8.5 Colon Colon - Transverse 0001157 161 533 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989137 1.53942e+06 0.931945 0.991549 0.737847 24667 1 76 0.00284179 210 0 9.87357e+07 0.0677805 676681 9.95773e+07 9.47487e+06 24702 4.91392e+07 0 0.194098 0.991549 0.731612 9.87357e+07 0.00385281 2.05185e+07 5.20311e+07 2.07575e+07 248 2.07702e+07 1.46489e+07 0.00334607 2.07625e+07 49.9907 0.00679554 0.99396 0 50.2894 GTEX-Y114-1626-SM-4TT7I 1 B1 6 pieces, up to 8x4mm; generally all muscularis, a few have adherent fatty nubbins up to ~3mm thick, delineated 8.4 Colon Colon - Sigmoid 0001159 172 522 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.990353 924107 0.957938 0.992744 0.80077 24365 1 76 0.00275388 281 0 1.08073e+08 0.0417399 502616 1.08863e+08 1.06014e+07 24392 5.3779e+07 0 0.157168 0.992744 0.794959 1.08073e+08 0.00378825 2.29503e+07 2.69863e+07 2.31274e+07 302 2.31371e+07 1.89729e+07 0.00326982 2.32015e+07 50.0695 0.00461698 0.995134 0 50.1922 GTEX-Y114-1726-SM-4TT7U 1 B1 2 pieces, 9x7 & 13x8mm; typical post menopausal appearance 8.4 Ovary Ovary 0000992 176 518 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989974 1.31541e+06 0.942924 0.99243 0.728235 25660 1 76 0.00277672 279 0 1.09986e+08 0.0567409 273632 1.10825e+08 1.07458e+07 25708 5.47338e+07 0 0.214689 0.99243 0.722722 1.09986e+08 0.00374534 2.34512e+07 4.58023e+07 2.36877e+07 275 2.37505e+07 1.84762e+07 0.00325983 2.36624e+07 49.9071 0.00246904 0.994885 0 50.2508 GTEX-Y114-1826-SM-4TT87 1 B1 2 pieces, 11.5x5 & 8x6mm; cystic atrophy/weakly proliferative endometrium, up to ~2mm thick, delineated 8.9 Uterus Uterus 0000995 182 512 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989328 1.17314e+06 0.944773 0.99182 0.735365 25033 1 76 0.00285702 211 0 1.03478e+08 0.054909 312813 1.04332e+08 1.03131e+07 25080 5.14781e+07 0 0.209408 0.99182 0.729349 1.03478e+08 0.00392193 2.18149e+07 3.65013e+07 2.20368e+07 249 2.20513e+07 1.66484e+07 0.00338814 2.20645e+07 50.015 0.00299825 0.994311 0 50.2531 GTEX-Y114-1926-SM-4TT8J 1 B1 6 pieces, up to 5x4mm; mucosa is sloughed on all pieces 8.2 Vagina Vagina 0000996 191 503 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989828 1.14716e+06 0.949307 0.99246 0.784744 24045 1 76 0.0027917 214 0 9.8966e+07 0.0503838 499149 9.97179e+07 9.55468e+06 24072 4.92343e+07 0 0.164563 0.99246 0.778828 9.8966e+07 0.00388845 2.07957e+07 3.55783e+07 2.09841e+07 255 2.10065e+07 1.69233e+07 0.00333862 2.10372e+07 50.0365 0.00500561 0.995092 0 50.2255 GTEX-Y114-2026-SM-4TT7L 1 B1 2 pieces, 12x11 & 13x12mm; atrophic TDLUs in one, delineated 8.3 Breast Breast - Mammary Tissue 0008367 198 496 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989259 1.41724e+06 0.94217 0.991738 0.755119 25580 1 76 0.00304902 277 0 1.09571e+08 0.0572485 452181 1.10484e+08 1.10665e+07 25614 5.45076e+07 0 0.187051 0.991738 0.74888 1.09571e+08 0.00406921 2.33017e+07 4.84423e+07 2.35317e+07 292 2.35736e+07 1.73669e+07 0.00355784 2.3543e+07 49.9675 0.00409271 0.994216 0 50.2455 GTEX-Y114-2126-SM-4TT8B 0 B1 6 pieces, up to 7x3.5mm; squamous epithelium is ~2.5% thickness 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 202 492 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.977763 3.47408e+06 0.82978 0.981362 0.668555 21831 1 76 0.00312633 153 0 7.62273e+07 0.169512 735444 7.7675e+07 7.76774e+06 21848 3.78663e+07 0 0.161224 0.981362 0.656095 7.62273e+07 0.00507633 1.41067e+07 1.35564e+08 1.4555e+07 151 1.45455e+07 9.45689e+06 0.00409775 1.44788e+07 49.8852 0.00946822 0.984961 0 50.782 GTEX-Y114-2326-SM-4TT7X 0 B1 2 pieces, 11x7.5 & 9.5x8mm; 8 Adipose Tissue Adipose - Subcutaneous 0002190 226 468 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989191 840192 0.959214 0.991864 0.77308 24108 1 76 0.00279953 277 0 9.97903e+07 0.0404785 297964 1.00609e+08 1.00278e+07 24146 4.96441e+07 0 0.186134 0.991864 0.76679 9.97903e+07 0.00383681 2.1595e+07 2.7132e+07 2.1759e+07 259 2.18222e+07 1.72082e+07 0.00331677 2.17973e+07 49.9715 0.00296161 0.994538 0 50.1891 GTEX-Y114-2426-SM-4TT8A 0 B1 6 pieces, up to 9x3.5mm; squamous epithelium is ~3% ofthickness 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 228 466 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.983136 2.8836e+06 0.856739 0.986133 0.691261 22429 1 76 0.00305471 151 0 7.58102e+07 0.142822 581378 7.68763e+07 7.87199e+06 22443 3.76888e+07 0 0.165478 0.986133 0.681675 7.58102e+07 0.00465039 1.44957e+07 1.0944e+08 1.48893e+07 151 1.48859e+07 1.0269e+07 0.00385013 1.47971e+07 49.8503 0.00756251 0.989129 0 50.6697 GTEX-Y114-2526-SM-4TT8M 0 B1 2 pieces, 10x7 & 11x10mm; less than 2% interstitial fat, good specimens 8.1 Muscle Muscle - Skeletal 0011907 235 459 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.990557 1.21248e+06 0.95206 0.992936 0.829087 20865 1 76 0.002807 276 0 1.06043e+08 0.0477179 981354 1.06798e+08 1.03001e+07 20878 5.28025e+07 0 0.122973 0.992936 0.82323 1.06043e+08 0.00381415 2.22411e+07 4.4151e+07 2.24729e+07 295 2.24642e+07 1.98457e+07 0.00330937 2.25016e+07 50.0415 0.00918889 0.995314 0 50.2592 GTEX-Y114-2626-SM-4TT8Y 0 B1 2 pieces, 5x4.5 & 5x4mm; minute adherent nubbins of fat on both, ~0.5mm 7.3 Nerve Nerve - Tibial 0001323 237 457 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.988982 1.09874e+06 0.943148 0.991584 0.727225 25139 1 76 0.00297289 211 0 9.48995e+07 0.0565982 441431 9.57049e+07 9.55442e+06 25183 4.72008e+07 0 0.215923 0.991584 0.721105 9.48995e+07 0.00408059 2.02785e+07 3.40905e+07 2.04523e+07 219 2.04786e+07 1.37132e+07 0.00352529 2.05004e+07 50.0265 0.00461242 0.994187 0 50.2133 GTEX-Y114-2726-SM-4TT9B 0 B1 2 pieces, 6x4.5 & 7x5mm; 1mm adherent fibrous &/or peripher al nerve on both 7.4 Blood Vessel Artery - Tibial 0007610 239 455 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4016 09/28/2013 TruSeq.v1 EXCLUDE 0.988559 1.00713e+06 0.94944 0.991299 0.785733 22753 1 76 0.00285991 167 0 8.25103e+07 0.0502578 275540 8.32345e+07 8.26231e+06 22776 4.10281e+07 0 0.163706 0.991299 0.778896 8.25103e+07 0.00408843 1.73744e+07 2.79245e+07 1.75565e+07 186 1.75728e+07 1.39681e+07 0.00347247 1.75928e+07 50.0285 0.00331041 0.994038 0 50.2606 GTEX-Y114-2726-SM-E9J3X 0 B1 2 pieces, 6x4.5 & 7x5mm; 1mm adherent fibrous &/or peripher al nerve on both 7.2 Blood Vessel Artery - Tibial 0007610 239 455 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.985599 403334 0.974373 0.986355 0.818651 23149 1 76 0.00195451 215 0 9.68711e+07 0.02526 226468 9.82112e+07 4.93863e+06 23177 4.82527e+07 0 0.155721 0.986355 0.807481 9.68711e+07 0.00261055 2.11059e+07 8.9324e+06 2.12864e+07 246 2.12009e+07 1.90667e+07 0.00228228 2.12749e+07 50.087 0.00230593 0.98711 0 50.2128 GTEX-Y3I4-0004-SM-4YUVP B1 Blood Whole Blood 0013756 -202 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y3I4-0004-SM-53IUR B1 Blood Whole Blood 0013756 -202 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) EXCLUDE GTEX-Y3I4-0004-SM-6UH1C B1 Blood Whole Blood 0013756 -202 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y3I4-0006-SM-4TT1E B1 7.8 Blood Whole Blood 0013756 -202 BP-33451 RNA isolation_PAXgene Blood RNA (Manual) 11/20/2012 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.977307 1.23176e+06 0.963454 0.979416 0.819298 18184 1 76 0.00265927 153 0 1.12951e+08 0.0357595 652904 1.15325e+08 9.51131e+06 18191 5.61487e+07 0 0.144156 0.979416 0.802434 1.12951e+08 0.00351861 2.51581e+07 1.22968e+08 2.57163e+07 200 2.57376e+07 2.76527e+07 0.00308801 2.53854e+07 49.6555 0.00566141 0.981525 0 50.5486 GTEX-Y3I4-0008-SM-4TT21 B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 178 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.992436 1.0211e+06 0.972895 0.994258 0.861579 22020 1 76 0.00211409 393 0 1.32398e+08 0.0267677 431530 1.33163e+08 1.05793e+07 22041 6.59279e+07 0 0.111316 0.994258 0.856631 1.32398e+08 0.00256934 2.94845e+07 2.62085e+07 2.95636e+07 337 2.96327e+07 3.4382e+07 0.0023413 2.96501e+07 50.0146 0.00324062 0.99608 0 50.067 GTEX-Y3I4-0126-SM-4TT26 1 B1 2 pieces, 11x6 & 9x6mm moderate congestion 6.9 Spleen Spleen 0002106 103 463 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.988028 862628 0.959181 0.990163 0.764391 25504 1 76 0.00336099 272 0 1.12446e+08 0.038552 964905 1.13563e+08 9.36885e+06 25549 5.5788e+07 0 0.19479 0.990163 0.756872 1.12446e+08 0.00408525 2.47324e+07 2.27707e+07 2.47801e+07 318 2.4829e+07 1.64603e+07 0.00372234 2.4924e+07 50.0955 0.00849663 0.992299 0 50.0481 GTEX-Y3I4-0226-SM-4TT27 1 B1 2 pieces, 8.5x8.5 & 8.5x6mm; small adenoma, delineated 6 Thyroid Thyroid 0002046 106 461 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.9868 928974 0.961831 0.988912 0.757269 25201 1 76 0.00265207 271 0 1.05107e+08 0.0379434 773653 1.06285e+08 8.64407e+06 25259 5.22402e+07 0 0.204562 0.988912 0.748872 1.05107e+08 0.00334425 2.29392e+07 1.70914e+07 2.30057e+07 307 2.29622e+07 1.38389e+07 0.00299742 2.32051e+07 50.2631 0.00727902 0.991025 0 50.0724 GTEX-Y3I4-0326-SM-4TT28 1 B1 6 pieces, up to 11x4mm; 8.4 Blood Vessel Artery - Aorta 0001496 111 456 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.990744 906729 0.96929 0.992756 0.827089 23388 1 76 0.00241553 277 0 1.03509e+08 0.0303629 431373 1.04264e+08 8.3009e+06 23413 5.14919e+07 0 0.142201 0.992756 0.821097 1.03509e+08 0.0031164 2.23887e+07 1.41907e+07 2.25229e+07 285 2.24723e+07 1.89846e+07 0.00276525 2.2654e+07 50.2013 0.00413732 0.994767 0 50.1495 GTEX-Y3I4-0426-SM-4TT29 1 B1 2 pieces, 9x8 & 10x8mm; diffuse, acute broncho pneumonia, densest areas delineated 8.6 Lung Lung 0008952 113 454 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4014,LCSET-4325 11/02/2013 TruSeq.v1 RNASEQ 0.989804 660183 0.966715 0.992275 0.761296 22543 1 76 0.00247315 115 0 5.64017e+07 0.0329368 403550 5.68408e+07 4.79193e+06 22565 2.8032e+07 0 0.205419 0.992275 0.755415 5.64017e+07 0.00354638 1.24751e+07 1.03944e+07 1.24859e+07 129 1.24846e+07 8.95618e+06 0.00300843 1.26215e+07 50.2727 0.00709965 0.994746 0 50.0215 GTEX-Y3I4-0526-SM-4TT6X 1 B1 2 pieces, 10x10 & 13x9mm; 8.1 Heart Heart - Atrial Appendage 0006631 117 451 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.990371 1.27534e+06 0.954657 0.993191 0.83186 20965 1 76 0.00280104 368 0 9.87673e+07 0.0451356 3.73502e+06 9.94444e+07 9.44187e+06 20979 4.91497e+07 0 0.122797 0.993191 0.826196 9.87673e+07 0.00404383 2.0546e+07 4.97997e+07 2.08783e+07 341 2.06923e+07 1.18398e+07 0.00342067 2.10065e+07 50.3767 0.0375589 0.996011 0 50.401 GTEX-Y3I4-0626-SM-4TT7A 1 B1 2 pieces, 9x9 & 8x6.5mm; patchy fibrosis, confluent, c/w remote infarct(s) 8.2 Heart Heart - Left Ventricle 0006566 118 450 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.99072 1.58153e+06 0.942061 0.993142 0.830925 19946 1 76 0.00280379 265 0 9.63227e+07 0.0577087 3.835e+06 9.69879e+07 9.21829e+06 19953 4.79577e+07 0 0.111135 0.993142 0.825227 9.63227e+07 0.00384533 2.02997e+07 6.08237e+07 2.0636e+07 319 2.04033e+07 1.25289e+07 0.00332329 2.07695e+07 50.4446 0.039541 0.995564 0 50.4108 GTEX-Y3I4-0726-SM-4TT7M 1 B1 2 pieces, 9x9 & 12x7mm; 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 123 446 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4016 09/28/2013 TruSeq.v1 EXCLUDE 0.989294 1.19838e+06 0.953431 0.992089 0.81486 23492 1 76 0.00278243 274 0 9.84827e+07 0.0463006 848721 9.9268e+07 9.70033e+06 23514 4.89882e+07 0 0.138571 0.992089 0.808414 9.84827e+07 0.0040613 2.123e+07 3.64599e+07 2.14739e+07 282 2.13997e+07 1.5488e+07 0.00342006 2.1603e+07 50.2364 0.00854979 0.994884 0 50.2856 GTEX-Y3I4-0726-SM-E9J3Y 1 B1 2 pieces, 9x9 & 12x7mm; 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 123 446 BP-80997 RNA Extraction from Paxgene-derived Lysate Plate Based 11/29/2016 LCSET-10739 03/30/2017 TruSeq.v1 RNASEQ 0.989202 314215 0.977785 0.989798 0.835559 23500 1 76 0.00180839 376 0 1.02802e+08 0.0219139 789361 1.03861e+08 4.70112e+06 23526 5.12762e+07 0 0.142226 0.989798 0.827034 1.02802e+08 0.00236856 2.2736e+07 1.01887e+07 2.30327e+07 335 2.29049e+07 1.79779e+07 0.00208831 2.29226e+07 50.0193 0.00760014 0.990393 0 50.3241 GTEX-Y3I4-0826-SM-4TT2A 1 B1 2 pieces, 11x9 & 11x10mm; well preserved; Islets rare but visible. Fibrous areas suggest remote pancreatitis 7.3 Pancreas Pancreas 0001150 124 445 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.99071 718182 0.972652 0.992589 0.847814 23288 1 76 0.00258153 208 0 1.22053e+08 0.0270413 443348 1.22964e+08 9.45011e+06 23313 6.0752e+07 0 0.124838 0.992589 0.841531 1.22053e+08 0.00319832 2.76941e+07 3.43579e+07 2.80997e+07 224 2.80896e+07 3.41462e+07 0.00288934 2.79374e+07 49.8642 0.0036055 0.994468 0 50.3635 GTEX-Y3I4-0926-SM-4TT2B 1 B1 6 pieces, up to 9.5x5mm; all muscularis, good specimens 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 131 438 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.99139 960066 0.970973 0.993416 0.820835 23931 1 76 0.0024683 379 0 1.26534e+08 0.0287847 1.24824e+06 1.27373e+08 9.86459e+06 23960 6.29632e+07 0 0.150139 0.993416 0.81543 1.26534e+08 0.00302117 2.75874e+07 2.05519e+07 2.78169e+07 370 2.76943e+07 2.04761e+07 0.00274417 2.79667e+07 50.2446 0.00979991 0.995442 0 50.2071 GTEX-Y3I4-1026-SM-4TT2C 1 B1 6 pieces, up to 10x5mm; all muscularis, good specimens 8.6 Esophagus Esophagus - Muscularis 0004648 137 432 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.992041 925519 0.970044 0.993922 0.833068 23283 1 76 0.00241367 281 0 1.06958e+08 0.029671 864017 1.07612e+08 8.66534e+06 23311 5.32358e+07 0 0.136976 0.993922 0.828004 1.06958e+08 0.00291832 2.31589e+07 1.87392e+07 2.33359e+07 326 2.32868e+07 1.90635e+07 0.00266552 2.34097e+07 50.1317 0.00802898 0.995802 0 50.1904 GTEX-Y3I4-1126-SM-4TT7Y 1 B1 6 pieces, up to 9x5mm; mainly muscularis, adherent fatty nubbins on 5/6 up to 2 mm in d, rep ones delineated 8.2 Colon Colon - Sigmoid 0001159 139 430 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.988587 1.63022e+06 0.931854 0.991069 0.757049 23906 1 76 0.0027057 277 0 1.01712e+08 0.0678761 1.06928e+06 1.02629e+08 1.00114e+07 23938 5.06146e+07 0 0.174805 0.991069 0.750288 1.01712e+08 0.0037559 2.11745e+07 5.68008e+07 2.14339e+07 277 2.14332e+07 1.49601e+07 0.00322948 2.14409e+07 50.009 0.0104189 0.993552 0 50.3044 GTEX-Y3I4-1226-SM-4TT8N 1 B1 6 pieces, up to 7x3mm; squamous mucosa ~15% thickness 9.4 Esophagus Esophagus - Mucosa 0006920 143 427 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.988111 1.44339e+06 0.933834 0.990743 0.760113 23951 1 76 0.00275599 209 0 1.02931e+08 0.0658022 371170 1.03892e+08 1.06717e+07 23979 5.12165e+07 0 0.173721 0.990743 0.753076 1.02931e+08 0.00381345 2.20309e+07 6.22373e+07 2.24503e+07 253 2.25213e+07 1.89512e+07 0.00328332 2.22331e+07 49.678 0.00357264 0.993375 0 50.4714 GTEX-Y3I4-1326-SM-4TT8Z 1 B1 6 pieces, up to 8x5mm; 3/6 with mucosa, well-preserved, lymphoid aggregates visible, ~10% total tissue 7.3 Small Intestine Small Intestine - Terminal Ileum 0001211 149 421 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.98877 1.61339e+06 0.947527 0.991494 0.772006 25604 1 76 0.00279161 378 0 1.43608e+08 0.0522731 1.79721e+06 1.4484e+08 1.45186e+07 25644 7.14468e+07 0 0.175521 0.991494 0.76544 1.43608e+08 0.00392836 3.04823e+07 5.95126e+07 3.08622e+07 386 3.07749e+07 1.81739e+07 0.00335842 3.09714e+07 50.1591 0.0124082 0.994219 0 50.3096 GTEX-Y3I4-1426-SM-4TT9C 1 B1 6 pieces, up to 12x4.5mm; mucosa well preserved, ~15% of thickness 7.5 Colon Colon - Transverse 0001157 153 417 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989432 1.01696e+06 0.950945 0.992244 0.796358 23018 1 76 0.00273386 203 0 9.02705e+07 0.0488514 1.04316e+06 9.09761e+07 8.84624e+06 23040 4.49108e+07 0 0.154587 0.992244 0.790181 9.02705e+07 0.00388154 1.91648e+07 3.49283e+07 1.94482e+07 253 1.94254e+07 1.29821e+07 0.00330607 1.94431e+07 50.0227 0.0114663 0.995055 0 50.367 GTEX-Y3I4-1526-SM-4TT7K 1 B1 2 pieces, 13x11 & 12x10.5mm; mainly fat, ~10% fibrous tissue, rep areas delineated. No TDLU 7.6 Breast Breast - Mammary Tissue 0008367 155 415 BP-36612 RNA isolation_PAXgene Tissue miRNA 03/01/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989667 1.12574e+06 0.942332 0.992323 0.766776 24275 1 76 0.00287602 166 0 8.39957e+07 0.057411 440920 8.46455e+07 8.12999e+06 24300 4.17801e+07 0 0.175556 0.992323 0.76089 8.39957e+07 0.00407899 1.77998e+07 3.45501e+07 1.79915e+07 196 1.79876e+07 1.24413e+07 0.0034759 1.80461e+07 50.0811 0.00520902 0.994979 0 50.2678 GTEX-Y3I4-1626-SM-4TT7W 1 B1 6 pieces, up to 11x3mm; mucosa ~10-15% thickness, mild/moderate autolysis 6.1 Stomach Stomach 0000945 156 415 BP-36612 RNA isolation_PAXgene Tissue miRNA 03/01/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.986931 1.37556e+06 0.928861 0.990111 0.761432 24689 1 76 0.00291699 244 0 9.53445e+07 0.0706894 1.93444e+06 9.62968e+07 9.84906e+06 24716 4.7383e+07 0 0.16743 0.990111 0.753902 9.53445e+07 0.00436281 2.0225e+07 8.34789e+07 2.07039e+07 240 2.06604e+07 1.48155e+07 0.00363758 2.0591e+07 49.9159 0.0200883 0.993291 0 50.585 GTEX-Y3I4-1726-SM-4TT89 0 B1 6 pieces, up to 10x4mm; squamous epithelium is ~2-3% thickness 7.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 162 409 BP-36612 RNA isolation_PAXgene Tissue miRNA 03/01/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.985023 2.36844e+06 0.898154 0.988351 0.710657 23933 1 76 0.00292881 207 0 9.54675e+07 0.101544 1.15479e+06 9.65927e+07 9.75145e+06 23966 4.74462e+07 0 0.187498 0.988351 0.702378 9.54675e+07 0.00446566 1.93893e+07 8.8819e+07 1.97104e+07 214 1.96743e+07 1.24661e+07 0.00369464 1.97901e+07 50.1467 0.0119552 0.991679 0 50.4106 GTEX-Y3I4-1726-SM-CKJTB 0 B1 6 pieces, up to 10x4mm; squamous epithelium is ~2-3% thickness Skin Skin - Not Sun Exposed (Suprapubic) 0036149 162 409 BP-36613 DNA Isolation from Tissue via QIAgen Spin Column 03/01/2013 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-Y3I4-1926-SM-4TT8L 0 B1 3 pieces, up to 4x3.5mm; excellent specimens, well-preserved, 2mm nubbin non keratinizing squamous (inner lip) mucosa is present 9.2 Salivary Gland Minor Salivary Gland 0006330 164 407 BP-36612 RNA isolation_PAXgene Tissue miRNA 03/01/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.984602 1.26359e+06 0.938447 0.987432 0.733977 25756 1 76 0.00359542 168 0 9.40832e+07 0.0582355 308438 9.52807e+07 9.2495e+06 25792 4.66008e+07 0 0.20447 0.987432 0.724752 9.40832e+07 0.00487518 2.01122e+07 4.16614e+07 2.02406e+07 198 2.03188e+07 1.42184e+07 0.00423347 2.0314e+07 49.9941 0.00323715 0.990261 0 50.1591 GTEX-Y3I4-2026-SM-4TT6Z 1 B1 2 pieces, 11x8 & 10x7.5mm; generalized tubular atrophy, empty lumina; ~1% of tubules with spermatogenesis 8.1 Testis Testis 0000473 177 394 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989886 1.26726e+06 0.916895 0.992094 0.704298 33229 1 76 0.0026755 212 0 9.84657e+07 0.0827823 850721 9.92504e+07 9.25826e+06 33281 4.90073e+07 0 0.212598 0.992094 0.698729 9.84657e+07 0.00355839 2.04344e+07 4.44846e+07 2.06395e+07 218 2.06965e+07 1.5586e+07 0.00311596 2.05892e+07 49.87 0.00857147 0.994302 0 50.2497 GTEX-Y3I4-2126-SM-4TT7C 0 B1 6 pieces, up to 10x4mm; squamous epithelium is ~2% thickness. Adherent subcutaneous fat on several, up to 1.5mm thick 7.7 Skin Skin - Sun Exposed (Lower leg) 0004264 179 393 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.987597 2.02948e+06 0.901396 0.990348 0.715171 24327 1 76 0.00269719 182 0 8.72777e+07 0.09831 726715 8.81283e+07 8.25888e+06 24347 4.34178e+07 0 0.186224 0.990348 0.708269 8.72777e+07 0.00399256 1.76748e+07 7.91908e+07 1.80603e+07 185 1.80571e+07 1.27418e+07 0.00334308 1.79547e+07 49.8578 0.00824611 0.993098 0 50.5394 GTEX-Y3I4-2226-SM-4TT7O 0 B1 2 pieces, 12x9 & 9x8mm; ~10-15% fibrous tissue, delineated (rep areas ) 7.6 Adipose Tissue Adipose - Subcutaneous 0002190 182 390 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989566 507134 0.972877 0.992547 0.812654 24946 1 76 0.00266637 382 0 1.25329e+08 0.0268304 424242 1.2627e+08 1.25016e+07 24984 6.23096e+07 0 0.160223 0.992547 0.806597 1.25329e+08 0.00393235 2.74035e+07 1.48844e+07 2.75644e+07 375 2.75948e+07 2.27048e+07 0.00329746 2.77314e+07 50.1234 0.00335979 0.995527 0 50.1463 GTEX-Y3I4-2326-SM-4TT81 0 B1 2 pieces, 11x7 & 10x9mm; ~10% interstital fat, rep area delineated 8 Muscle Muscle - Skeletal 0011907 183 389 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4016 09/28/2013 TruSeq.v1 RNASEQ 0.989655 1.21408e+06 0.934366 0.991878 0.807256 19655 1 76 0.00260764 203 0 8.32431e+07 0.0654134 1.38128e+06 8.39248e+07 8.43719e+06 19664 4.14591e+07 0 0.127111 0.991878 0.800699 8.32431e+07 0.00353819 1.71333e+07 5.48554e+07 1.73921e+07 229 1.74064e+07 1.30526e+07 0.00307187 1.73004e+07 49.8473 0.0164586 0.9941 0 50.3748 GTEX-Y3I4-2426-SM-6LLJK 0 B1 2 pieces, 4.5x3 & 4x3mm; good clean specimens 5.9 Nerve Nerve - Tibial 0001323 185 387 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.974022 129169 0.96702 0.982759 0.817922 23542 1 76 0.00251374 156 0 6.7669e+07 0.0327893 369369 6.88561e+07 6.20038e+06 23570 3.3425e+07 0 0.149098 0.982759 0.80382 6.7669e+07 0.00393487 1.46384e+07 6.64581e+06 1.4666e+07 172 1.47978e+07 1.00745e+07 0.00321799 1.50749e+07 50.4639 0.00536436 0.991495 0 50.0471 GTEX-Y3IK-0001-SM-4WWE1 B1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -91 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987277 1.05665e+06 0.957542 0.989891 0.806692 23853 1 76 0.00320859 290 0 1.16909e+08 0.0419545 1.35276e+06 1.18103e+08 1.55379e+07 23891 5.81088e+07 0 0.15085 0.989891 0.798537 1.16909e+08 0.0044716 2.56562e+07 3.71279e+07 2.57002e+07 281 2.57977e+07 2.62277e+07 0.00383843 2.5867e+07 50.0671 0.0114541 0.992504 0 50.0428 GTEX-Y3IK-0004-SM-4YUX2 B1 Blood Whole Blood 0013756 -91 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 GTEx_Option_1_OM25_01 10/26/2013 Illumina OMNI SNP Array OMNI GTEX-Y3IK-0004-SM-53UBR B1 Blood Whole Blood 0013756 -91 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Y3IK-0004-SM-6UH1D B1 Blood Whole Blood 0013756 -91 BP-33337,BP-33339 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/19/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y3IK-0005-SM-4WWDE B1 8.9 Blood Whole Blood 0013756 -91 BP-33451 RNA isolation_PAXgene Blood RNA (Manual) 11/20/2012 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986262 852830 0.954728 0.989239 0.795513 20146 1 76 0.00296379 124 0 8.08393e+07 0.0444109 338169 8.17186e+07 1.0924e+07 20161 4.01184e+07 0 0.159215 0.989239 0.786953 8.08393e+07 0.00510862 1.78224e+07 6.62125e+07 1.78694e+07 147 1.79086e+07 1.73368e+07 0.00403298 1.80396e+07 50.1821 0.00413821 0.992216 0 50.0657 GTEX-Y3IK-0008-SM-4WWDZ B1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 172 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.98581 1.17469e+06 0.948839 0.989318 0.833325 20682 1 76 0.00249654 178 0 8.62033e+07 0.0508255 559528 8.7134e+07 1.20827e+07 20695 4.28324e+07 0 0.115513 0.989318 0.824424 8.62033e+07 0.00403021 1.87859e+07 4.1754e+07 1.88558e+07 173 1.896e+07 2.15464e+07 0.00326066 1.89935e+07 50.0441 0.00642147 0.992826 0 50.0929 GTEX-Y3IK-0126-SM-4WWE9 2 B1 2 pieces, 11x11 & 11x10mm; 8.4 Spleen Spleen 0002106 74 480 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.979917 1.04260e+06 0.938824 0.982392 0.748843 24498 1 76 0.00538967 161 0 9.4513e+07 0.0513224 483034 9.62071e+07 1.27867e+07 24527 4.64968e+07 0 0.18998 0.982392 0.735657 9.4513e+07 0.00680327 2.06588e+07 6.36198e+07 2.06429e+07 187 2.07477e+07 1.27633e+07 0.00609469 2.0809e+07 50.0738 0.00502077 0.984867 0 49.9807 GTEX-Y3IK-0226-SM-51MRJ 1 B1 3 pieces, up to 10x6mm; 9.3 Adrenal Gland Adrenal Gland 0002369 72 482 BP-35206 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.987176 455500 0.97634 0.990898 0.82959 23806 1 76 0.00355598 269 0 1.1034e+08 0.023352 2.14869e+06 1.11354e+08 2.40544e+07 23832 5.48512e+07 0 0.14675 0.990898 0.822039 1.1034e+08 0.00603671 2.41413e+07 2.41659e+07 2.37844e+07 314 2.39104e+07 1.56559e+07 0.00479168 2.43632e+07 50.469 0.019296 0.99462 0 49.6277 GTEX-Y3IK-0426-SM-4WWE2 1 B1 2 pieces, 11x10 & 11x9mm. 30% internal and external adipose. 6.6 Pancreas Pancreas 0001150 79 475 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988066 1.40206e+06 0.947433 0.990892 0.782162 23591 1 76 0.00316492 130 0 9.67828e+07 0.0521881 548097 9.76724e+07 1.31355e+07 23620 4.81045e+07 0 0.165271 0.990892 0.775038 9.67828e+07 0.00476587 2.13893e+07 5.80871e+07 2.15822e+07 149 2.16043e+07 2.33433e+07 0.00396311 2.16733e+07 50.0798 0.00561159 0.993718 0 50.2245 GTEX-Y3IK-0526-SM-4WWE3 1 B1 2 pieces, 15x9 & 10x9mm. Multinodular goitre with regressive changes (fibrous bands). 8 Thyroid Thyroid 0002046 86 468 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.983869 623933 0.958794 0.988034 0.734689 26650 1 76 0.00315209 275 0 1.09431e+08 0.0409134 767743 1.10756e+08 1.53632e+07 26705 5.43197e+07 0 0.224106 0.988034 0.725897 1.09431e+08 0.00520158 2.35945e+07 1.88712e+07 2.36825e+07 276 2.38074e+07 1.60046e+07 0.00417252 2.39074e+07 50.1047 0.00693184 0.992199 0 50.0931 GTEX-Y3IK-0626-SM-4WWE4 1 B1 2 pieces, 10x8 & 10x8mm. Panacinar emphysema. Carbon deposits. 8.9 Lung Lung 0008952 88 466 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986839 752948 0.96237 0.990106 0.759989 24877 1 76 0.00320061 136 0 7.7325e+07 0.0371423 517161 7.80977e+07 1.00358e+07 24908 3.84063e+07 0 0.202381 0.990106 0.752469 7.7325e+07 0.00491751 1.69149e+07 1.9333e+07 1.69632e+07 157 1.70109e+07 1.28731e+07 0.00405622 1.71236e+07 50.165 0.00662197 0.993372 0 50.0713 GTEX-Y3IK-0726-SM-4WWE5 1 B1 6 pieces, up to 11x3mm. Well trimmed. No plaques. 7.1 Blood Vessel Artery - Aorta 0001496 89 465 BP-35169 RNA isolation_PAXgene Tissue miRNA 01/16/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988928 458518 0.968045 0.991714 0.797337 22997 1 76 0.00291886 167 0 8.16177e+07 0.0316149 399691 8.22997e+07 1.11952e+07 23016 4.05578e+07 0 0.170708 0.991714 0.79073 8.16177e+07 0.00441969 1.7498e+07 1.18959e+07 1.75208e+07 184 1.75122e+07 1.36749e+07 0.00366717 1.77394e+07 50.3224 0.00485653 0.9945 0 50.0325 GTEX-Y3IK-0826-SM-51MT8 1 B1 2 pieces, 11x8 & 10x8mm. 2x3 mm artifactual defect in 1 piece. 8.9 Heart Heart - Left Ventricle 0006566 92 462 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.987329 551130 0.976748 0.991878 0.85484 20117 1 76 0.00327105 117 0 6.05389e+07 0.022993 1.23350e+06 6.10347e+07 1.11173e+07 20128 3.00325e+07 0 0.121907 0.991878 0.847897 6.05389e+07 0.00606221 1.32321e+07 1.32533e+07 1.30806e+07 143 1.30854e+07 1.00467e+07 0.00466023 1.34784e+07 50.7397 0.0202099 0.996427 0 49.7122 GTEX-Y3IK-0926-SM-51MQU 1 B1 2 pieces, 6x4 & 4x3.5mm. 1 well trimmed, 1 with up to 1.5 mm external adipose. Moderate eccentric plaque but wide lumen. 8.7 Blood Vessel Artery - Coronary 0001621 92 462 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.986531 698771 0.96704 0.990897 0.832322 23887 1 76 0.00284064 275 0 9.69371e+07 0.0326279 536055 9.78276e+07 2.21888e+07 23910 4.81396e+07 0 0.134717 0.990897 0.824745 9.69371e+07 0.00549121 2.03899e+07 1.82885e+07 2.05548e+07 270 2.05894e+07 1.71129e+07 0.00416008 2.07605e+07 50.2069 0.00547959 0.995262 0 50.2014 GTEX-Y3IK-1026-SM-51MR7 0 B1 2 pieces, 14.5x9 & 11.5x9mm. 1 well trimmed; 1 with 30% adipose 8.6 Heart Heart - Atrial Appendage 0006631 95 459 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.987113 570648 0.977294 0.991303 0.827766 22326 1 76 0.00380495 268 0 1.01927e+08 0.0224508 2.8012e+06 1.02821e+08 2.35139e+07 22347 5.06527e+07 0 0.149529 0.991303 0.820566 1.01927e+08 0.00637207 2.1611e+07 3.10483e+07 2.11488e+07 285 2.11808e+07 1.45696e+07 0.00508308 2.19243e+07 50.8625 0.0272434 0.995493 0 49.4596 GTEX-Y3IK-1126-SM-51MSV 1 B1 6 pieces, up to 8x2mm. Well dissected; some mechanical disruption. 9.7 Esophagus Esophagus - Mucosa 0006920 112 442 BP-35709 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.983942 502236 0.972612 0.988217 0.83267 22738 1 76 0.00294262 209 0 9.00117e+07 0.0268225 529206 9.1085e+07 1.99716e+07 22755 4.4705e+07 0 0.139942 0.988217 0.822858 9.00117e+07 0.00533381 2.00113e+07 2.2779e+07 2.00372e+07 221 2.01267e+07 1.75616e+07 0.00413304 2.02983e+07 50.2122 0.00581002 0.992492 0 50.0323 GTEX-Y3IK-1226-SM-4WWEK 1 B1 6 pieces, up to 6x4mm. Well dissected. 7.7 Esophagus Esophagus - Muscularis 0004648 108 446 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984824 483816 0.969052 0.987655 0.806317 23832 1 76 0.00324128 206 0 9.16129e+07 0.0306849 844175 9.2758e+07 1.28239e+07 23860 4.55369e+07 0 0.162736 0.987655 0.796363 9.16129e+07 0.00469056 1.96188e+07 1.39385e+07 1.97174e+07 247 1.9713e+07 1.44781e+07 0.00396384 1.98748e+07 50.2044 0.00910083 0.990486 0 50.1253 GTEX-Y3IK-1326-SM-4YCD8 1 B1 6 pieces, up to 8x3mm. 1 piece 60% fibroadipose stroma; others are largely muscle (target) 8.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 106 448 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.988635 517579 0.968319 0.992137 0.804303 22651 1 76 0.00285656 156 0 7.60774e+07 0.0313933 657567 7.66804e+07 1.10047e+07 22674 3.78139e+07 0 0.164016 0.992137 0.797979 7.60774e+07 0.00459398 1.61795e+07 1.17241e+07 1.63187e+07 166 1.63012e+07 1.25952e+07 0.0037222 1.64541e+07 50.2333 0.00857543 0.995639 0 50.2142 GTEX-Y3IK-1426-SM-4YCES 2 B1 6 pieces, up to 8x2mm. All have mucosa and submucosa, no muscularis propria. One piece with small focus of chronic gastritis with intestinal metaplasia (annotated). Autolysis varies from 1 to 2. 7.3 Stomach Stomach 0000945 109 445 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.983564 268150 0.975291 0.988406 0.785803 22536 1 76 0.00314827 175 0 6.11926e+07 0.0241768 899578 6.19104e+07 9.3315e+06 22553 3.03345e+07 0 0.189488 0.988406 0.776692 6.11926e+07 0.00510899 1.37209e+07 1.89501e+07 1.37052e+07 138 1.37887e+07 1.09355e+07 0.00412383 1.39242e+07 50.2443 0.0145303 0.993247 0 49.9714 GTEX-Y3IK-1626-SM-4YCF5 0 B1 6 pieces, up to 10x4mm. Well trimmed. 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 122 432 BP-35758 RNA isolation_PAXgene Tissue miRNA 02/04/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.988444 624340 0.968237 0.992113 0.826459 23816 1 76 0.00288898 179 0 8.38537e+07 0.0315427 796541 8.45204e+07 1.1697e+07 23839 4.16383e+07 0 0.141778 0.992113 0.81994 8.38537e+07 0.00473286 1.81797e+07 1.38816e+07 1.83117e+07 201 1.83112e+07 1.41022e+07 0.00380751 1.84795e+07 50.2287 0.00942425 0.995782 0 50.1809 GTEX-Y3IK-1726-SM-4YCCR 2 B1 6 pieces, up to 10x2mm. Several small lymphoid nodules (marked). All pieces have muscularis propria. 6.4 Small Intestine Small Intestine - Terminal Ileum 0001211 156 398 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.985843 554004 0.967501 0.990678 0.807961 24782 1 76 0.00334631 196 0 8.65014e+07 0.0320833 1.48567e+06 8.73153e+07 1.38527e+07 24814 4.29216e+07 0 0.15954 0.990678 0.800429 8.65014e+07 0.00537259 1.86939e+07 1.80823e+07 1.87697e+07 203 1.88189e+07 1.2424e+07 0.00435451 1.90303e+07 50.2792 0.0170151 0.995514 0 50.1011 GTEX-Y3IK-1826-SM-4WWDS 2 B1 6 pieces, up to 11x2mm. All have only mucosa-submucosa; transverse colon should contain muscularis propria. 7.3 Colon Colon - Transverse 0001157 136 418 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.982704 788544 0.962182 0.98527 0.807511 24053 1 76 0.00378916 212 0 9.37685e+07 0.0371398 2.68734e+06 9.51704e+07 1.21931e+07 24083 4.65991e+07 0 0.154671 0.98527 0.795617 9.37685e+07 0.0052757 2.04211e+07 2.8305e+07 2.04973e+07 234 2.04848e+07 1.35582e+07 0.00453049 2.06731e+07 50.2288 0.0282372 0.987837 0 50.0931 GTEX-Y3IK-2026-SM-4YCDG 0 B1 2 pieces, 11x9 & 12.5x11mm. Numerous corpora albicantia. 7.7 Ovary Ovary 0000992 124 430 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.98819 396754 0.966862 0.991857 0.757228 23817 1 76 0.00266511 175 0 8.59498e+07 0.0328871 295627 8.66554e+07 1.34126e+07 23863 4.27181e+07 0 0.209635 0.991857 0.751062 8.59498e+07 0.00425758 1.8695e+07 1.13099e+07 1.88785e+07 179 1.89355e+07 1.53149e+07 0.0034584 1.89394e+07 50.005 0.00341152 0.995525 0 50.2442 GTEX-Y3IK-2126-SM-4YCDS 1 B1 2 pieces, 9x8 and 8x8mm. All myometrium in these cuts, no endometrium. 8 Uterus Uterus 0000995 127 427 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.987832 464328 0.967306 0.991523 0.769534 24397 1 76 0.00283203 173 0 9.21754e+07 0.0323996 403062 9.29634e+07 1.42354e+07 24438 4.58053e+07 0 0.197772 0.991523 0.763011 9.21754e+07 0.00454864 1.9921e+07 1.144e+07 2.00948e+07 201 2.01226e+07 1.55698e+07 0.00368714 2.0221e+07 50.1219 0.00433571 0.995215 0 50.2171 GTEX-Y3IK-2226-SM-4YCD4 1 B1 6 pieces, up to 12x5mm. 1 with minimal epithelium. 8.9 Vagina Vagina 0000996 130 424 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.984816 440223 0.971639 0.989184 0.802322 23885 1 76 0.0028559 170 0 8.23832e+07 0.0278863 311531 8.3284e+07 1.36121e+07 23909 4.09118e+07 0 0.169317 0.989184 0.793645 8.23832e+07 0.00464847 1.82371e+07 1.58595e+07 1.83329e+07 176 1.84351e+07 1.55518e+07 0.00374823 1.84839e+07 50.0661 0.00374059 0.993552 0 50.131 GTEX-Y3IK-2326-SM-4WWDT 1 B1 2 pieces, 13x12 & 13x11mm. Scattered small collections of ducts and lobules. Large central (adipose?) empty, unfixed. 7.9 Breast Breast - Mammary Tissue 0008367 157 397 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.990144 381405 0.965941 0.992361 0.766568 25154 1 76 0.00310167 146 0 7.68214e+07 0.0335258 434822 7.74128e+07 9.62798e+06 25187 3.81919e+07 0 0.199373 0.992361 0.760712 7.68214e+07 0.0043941 1.67699e+07 1.09101e+07 1.67851e+07 160 1.68114e+07 1.27862e+07 0.00374644 1.69132e+07 50.151 0.00561693 0.994578 0 50.0226 GTEX-Y3IK-2426-SM-4WWDU 0 B1 6 pieces, up to 9x2mm. Well trimmed, but with 10-20% intradermal adipose 8.3 Skin Skin - Sun Exposed (Lower leg) 0004264 174 380 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.979414 1.09175e+06 0.963716 0.983183 0.861914 22638 1 76 0.00312687 287 0 1.02319e+08 0.0359617 579410 1.0407e+08 1.4846e+07 22653 5.0803e+07 0 0.101801 0.983183 0.84742 1.02319e+08 0.00485429 2.20097e+07 3.20578e+07 2.21024e+07 302 2.21669e+07 1.93954e+07 0.00398727 2.23488e+07 50.2042 0.00556753 0.986952 0 50.1051 GTEX-Y3IK-2526-SM-4WWDM 1 B1 1 piece, skeletal muscle with some internal fat 7.5 Adipose Tissue Adipose - Subcutaneous 0002190 176 378 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988734 279149 0.980029 0.991319 0.827534 23796 1 76 0.00302892 280 0 9.87459e+07 0.0196343 688111 9.96106e+07 1.31325e+07 23823 4.90963e+07 0 0.152494 0.991319 0.82035 9.87459e+07 0.00437034 2.17253e+07 9.91634e+06 2.1813e+07 275 2.18311e+07 1.82265e+07 0.00369788 2.19553e+07 50.1419 0.00690801 0.993904 0 50.1007 GTEX-Y3IK-2626-SM-4WWDK 1 B1 fragmented, minute piece of fat 7.9 Muscle Muscle - Skeletal 0011907 183 371 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.99107 324292 0.979531 0.993579 0.863714 20931 1 76 0.00314785 163 0 8.64642e+07 0.0202255 809193 8.70229e+07 1.04205e+07 20945 4.30041e+07 0 0.115817 0.993579 0.858169 8.64642e+07 0.00460138 1.85925e+07 1.22966e+07 1.85426e+07 201 1.85166e+07 1.66589e+07 0.00387278 1.88213e+07 50.4081 0.00929862 0.996088 0 49.9328 GTEX-Y3IK-2726-SM-4WWDV 1 B1 2 pieces, 4x3 & 4x3mm. Well trimmed of adipose. 7 Nerve Nerve - Tibial 0001323 180 374 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984863 541083 0.964451 0.987904 0.763209 25412 1 76 0.00309979 279 0 1.0044e+08 0.0352779 522542 1.0167e+08 1.27291e+07 25453 4.98999e+07 0 0.201242 0.987904 0.753977 1.0044e+08 0.00438002 2.19109e+07 1.47193e+07 2.20088e+07 265 2.20405e+07 1.56227e+07 0.00373793 2.21774e+07 50.1548 0.00513959 0.990945 0 50.1114 GTEX-Y3IK-2826-SM-4WWDW 0 B1 2 pieces, 8x5 & 6.5x4mm. Well trimmed, minimal adventitial stroma. Each piece has a large and a small artery. 8.2 Blood Vessel Artery - Tibial 0007610 182 372 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984853 535555 0.971739 0.986978 0.823985 23654 1 76 0.00292323 280 0 1.0912e+08 0.0278796 515133 1.10559e+08 1.33595e+07 23679 5.42669e+07 0 0.147754 0.986978 0.813255 1.0912e+08 0.00411115 2.3356e+07 1.35712e+07 2.33763e+07 295 2.33568e+07 2.06016e+07 0.00351592 2.36088e+07 50.2683 0.00465933 0.989102 0 50.0218 GTEX-Y5LM-0002-SM-4YUV1 B1 Blood Whole Blood 0013756 -469 BP-33512 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y5LM-0002-SM-53IUF B1 Blood Whole Blood 0013756 -469 BP-33512 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Y5LM-0002-SM-6UH31 B1 Blood Whole Blood 0013756 -469 BP-33512 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/21/2012 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y5LM-0003-SM-4V6G1 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -469 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992434 1.18332e+06 0.964171 0.993459 0.79695 22234 1 76 0.00275805 283 0 1.14072e+08 0.0352617 667640 1.14823e+08 7.93047e+06 22280 5.67772e+07 0 0.167221 0.993459 0.791737 1.14072e+08 0.00313305 2.54005e+07 1.77202e+07 2.5423e+07 294 2.55125e+07 2.47821e+07 0.00294536 2.54303e+07 49.9193 0.00581449 0.994484 0 50.022 GTEX-Y5LM-0005-SM-4V6EJ B1 8.2 Blood Whole Blood 0013756 -469 BP-33529 RNA isolation_PAXgene Blood RNA (Manual) 11/21/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991342 1.80804e+06 0.920846 0.992526 0.747481 20961 1 76 0.00265078 189 0 9.84576e+07 0.0786406 566312 9.9199e+07 6.80432e+06 20983 4.89993e+07 0 0.173365 0.992526 0.741894 9.84576e+07 0.00334913 2.05021e+07 6.15913e+07 2.07669e+07 207 2.07849e+07 1.67188e+07 0.00299953 2.06649e+07 49.8553 0.00570885 0.99371 0 50.3209 GTEX-Y5LM-0126-SM-4VBRL 1 B1 2 pieces. 11.5x8 & 13x9mm; Smaller piece is 40% adipose. 9.7 Adrenal Gland Adrenal Gland 0002369 71 1080 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.990143 648018 0.97134 0.993214 0.85592 23541 1 76 0.00296513 373 0 1.07843e+08 0.0283116 3.65122e+06 1.0858e+08 1.02784e+07 23564 5.36429e+07 0 0.11542 0.993214 0.850112 1.07843e+08 0.00465773 2.36672e+07 1.78594e+07 2.38002e+07 337 2.3849e+07 1.7677e+07 0.00380882 2.39432e+07 50.0985 0.0336271 0.996285 0 50.14 GTEX-Y5LM-0226-SM-4VBRM 0 B1 6 pieces. up to 12.5x2.5mm; Adventitial extraneous stroma is up to 0.6 mm. No plaques. 8.8 Blood Vessel Artery - Aorta 0001496 76 1075 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.987415 1.03526e+06 0.962781 0.991555 0.839904 22614 1 76 0.00280257 276 0 1.04129e+08 0.0368606 251245 1.05016e+08 1.01795e+07 22639 5.17166e+07 0 0.122877 0.991555 0.832812 1.04129e+08 0.00503278 2.22464e+07 2.37715e+07 2.22573e+07 278 2.23289e+07 1.94794e+07 0.00391302 2.26136e+07 50.3167 0.00239245 0.995695 0 50.0122 GTEX-Y5LM-0326-SM-4VBRN 1 B1 2 pieces. 12x8 & 14x7mm; Not congested. Well defined lymphoid nodules. 8.8 Spleen Spleen 0002106 80 1071 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.977604 650385 0.961444 0.982713 0.788977 25182 1 76 0.00350381 274 0 1.06559e+08 0.0381352 789970 1.08434e+08 1.07363e+07 25228 5.28078e+07 0 0.172467 0.982713 0.775338 1.06559e+08 0.00600125 2.32683e+07 1.8613e+07 2.32905e+07 275 2.34303e+07 1.61326e+07 0.00474604 2.36704e+07 50.2549 0.00728529 0.987822 0 50.0239 GTEX-Y5LM-0426-SM-4VBRO 1 B1 2 pieces. 13x9 & 13x10mm; 70% small droplet variant of macrovesicular steatosis. 9.8 Liver Liver 0001114 83 1068 BP-35803 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.989244 646082 0.977835 0.992797 0.883852 21418 1 76 0.00295679 273 0 1.1055e+08 0.0214211 820738 1.11352e+08 1.13677e+07 21432 5.49363e+07 0 0.0939831 0.992797 0.877485 1.1055e+08 0.00469918 2.38058e+07 2.22975e+07 2.39086e+07 305 2.40353e+07 2.50831e+07 0.00382487 2.40536e+07 50.019 0.00737068 0.996349 0 50.1077 GTEX-Y5LM-0526-SM-4V6G3 1 B1 2 pieces. 18x9 & 13x10mm; 1 has 25% adipose. 7.4 Pancreas Pancreas 0001150 85 1066 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993208 478473 0.968497 0.994382 0.812654 22803 1 76 0.0023869 141 0 9.43002e+07 0.0313095 228457 9.4833e+07 6.81831e+06 22832 4.69646e+07 0 0.155843 0.994382 0.808088 9.43002e+07 0.00295324 2.13197e+07 2.21178e+07 2.16778e+07 160 2.16619e+07 2.41874e+07 0.00266973 2.14591e+07 49.7649 0.00240905 0.995556 0 50.4164 GTEX-Y5LM-0626-SM-4V6G4 1 B1 2 pieces. 14x9 & 10x10mm 7.9 Thyroid Thyroid 0002046 93 1058 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993443 435796 0.967088 0.99425 0.756784 24216 1 76 0.00217118 207 0 9.36303e+07 0.0326413 338496 9.41717e+07 6.03344e+06 24262 4.66367e+07 0 0.210304 0.99425 0.752432 9.36303e+07 0.00250607 2.05167e+07 1.193e+07 2.06957e+07 242 2.06602e+07 1.48215e+07 0.00233849 2.06308e+07 49.9644 0.00359445 0.995057 0 50.2172 GTEX-Y5LM-0726-SM-4VBRP 1 B1 2 pieces. 11x8 & 9x7mm; Patchy alveolar hemorrhage. 8.8 Lung Lung 0008952 99 1052 BP-35795 RNA isolation_PAXgene Tissue miRNA 02/05/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.987991 567794 0.973778 0.991773 0.837115 24044 1 76 0.00311393 272 0 1.02876e+08 0.0259146 349442 1.0373e+08 1.01031e+07 24067 5.11301e+07 0 0.136663 0.991773 0.830227 1.02876e+08 0.00498649 2.26739e+07 1.30542e+07 2.28781e+07 299 2.29549e+07 1.82043e+07 0.00404664 2.29808e+07 50.0282 0.00336878 0.995554 0 50.2241 GTEX-Y5LM-0826-SM-4VDSW 1 B1 2 pieces, 15x9 & 12x9mm: Central hollow defects in both pieces. 8.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 100 1051 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991212 831169 0.972975 0.992918 0.857211 22455 1 76 0.00216614 376 0 1.13222e+08 0.026819 688764 1.1403e+08 7.29118e+06 22470 5.63823e+07 0 0.115764 0.992918 0.851141 1.13222e+08 0.00326846 2.44658e+07 1.99258e+07 2.48805e+07 350 2.47996e+07 2.08866e+07 0.00271635 2.47389e+07 49.9388 0.00604021 0.994625 0 50.4202 GTEX-Y5LM-0926-SM-6LLJG 0 B1 6 pieces. up to 14x3mm; Well dissected, largely free of subcutaneous adipose. 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 102 1049 BP-50191 RNA Extraction from Paxgene-derived Lysate Plate Based 03/05/2014 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.978602 241177 0.967085 0.986469 0.786421 25112 1 76 0.00231114 279 0 9.78289e+07 0.0327597 1.26419e+06 9.91708e+07 8.10559e+06 25152 4.83992e+07 0 0.180665 0.986469 0.77578 9.78289e+07 0.00363766 2.14799e+07 1.07029e+07 2.14658e+07 307 2.16793e+07 1.5633e+07 0.00296911 2.20146e+07 50.3836 0.0127476 0.994336 0 49.9836 GTEX-Y5LM-1026-SM-4VDSQ 1 B1 6 pieces. up to 9.5x4mm; Well dissected. 9.5 Esophagus Esophagus - Mucosa 0006920 120 1031 BP-35836 RNA isolation_PAXgene Tissue miRNA 02/06/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.992065 702891 0.970034 0.993736 0.839762 22395 1 76 0.00232212 209 0 9.24177e+07 0.0297072 522002 9.30003e+07 5.94356e+06 22413 4.59941e+07 0 0.130272 0.993736 0.834502 9.24177e+07 0.00349053 2.06214e+07 1.86776e+07 2.06055e+07 239 2.05896e+07 1.83319e+07 0.00290534 2.08019e+07 50.2565 0.00561291 0.995407 0 49.9807 GTEX-Y5LM-1126-SM-4VDT5 1 B1 6 pieces. up to 11.5x7mm; Up to 2mm of periesophageal extraneous fibrous stroma 8.3 Esophagus Esophagus - Muscularis 0004648 114 1037 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.99045 442467 0.967334 0.991593 0.862803 21080 1 76 0.00216785 204 0 7.70631e+07 0.0325004 726269 7.77165e+07 5.2072e+06 21090 3.83141e+07 0 0.104531 0.991593 0.855549 7.70631e+07 0.00327319 1.6315e+07 1.24642e+07 1.65885e+07 237 1.64255e+07 1.11875e+07 0.00271988 1.65682e+07 50.2163 0.00934511 0.992736 0 50.4155 GTEX-Y5LM-1226-SM-4VDT6 1 B1 6 pieces. up to 12x6mm; Most well dissected; some periesophageal stroma. 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 119 1032 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991613 708039 0.959029 0.99311 0.847731 21502 1 76 0.00211624 263 0 8.23498e+07 0.0408086 748978 8.29212e+07 5.36086e+06 21516 4.09737e+07 0 0.111298 0.99311 0.841889 8.23498e+07 0.00330982 1.749e+07 2.13052e+07 1.77984e+07 256 1.767e+07 1.19383e+07 0.00271213 1.7758e+07 50.1242 0.00903241 0.994607 0 50.4369 GTEX-Y5LM-1326-SM-5RQIS 2 B1 6 pieces. up to 8x3mm; Mucosa and submucosa only. 8.3 Stomach Stomach 0000945 123 1028 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990475 157781 0.98038 0.991335 0.845632 21454 1 76 0.001953 224 0 6.13305e+07 0.0193588 230154 6.18666e+07 3.06360e+06 21471 3.05516e+07 0 0.134748 0.991335 0.838305 6.13305e+07 0.00270604 1.40101e+07 3.8528e+07 1.41578e+07 162 1.41588e+07 1.54724e+07 0.00232919 1.40655e+07 49.8346 0.00372017 0.992196 0 50.2622 GTEX-Y5LM-1426-SM-5RQJL 1 B1 6 pieces. up to 9x4mm; Well dissected: muscle mainly; no mucosa. 8.2 Colon Colon - Sigmoid 0001159 137 1014 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.99234 165404 0.975547 0.993471 0.823191 22946 1 76 0.00185933 207 0 7.46669e+07 0.0242152 600086 7.51576e+07 3.6888e+06 22967 3.72046e+07 0 0.152356 0.993471 0.817816 7.46669e+07 0.00256526 1.63542e+07 8.29082e+06 1.65325e+07 224 1.64866e+07 1.15753e+07 0.00221189 1.64779e+07 49.9868 0.00798437 0.994602 0 50.2711 GTEX-Y5LM-1526-SM-4VDTA 1 B1 6 pieces. up to 12x3mm; Only 1 of 6 has muscularis. Transverse colon sample should have full thickness of wall. 8.5 Colon Colon - Transverse 0001157 146 1005 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991329 462387 0.971674 0.993106 0.825325 23524 1 76 0.002317 288 0 1.00699e+08 0.0278901 1.02074e+06 1.01399e+08 6.41288e+06 23551 5.0118e+07 0 0.14635 0.993106 0.819635 1.00699e+08 0.00341789 2.21635e+07 1.60482e+07 2.25871e+07 316 2.25709e+07 1.57798e+07 0.00286646 2.23471e+07 49.7509 0.0100666 0.994883 0 50.4732 GTEX-Y5LM-1626-SM-4VDTB 2 B1 6 pieces. up to 7x2mm; 1 small lymphoid nodule in each of 3 pieces. Dissection good: no muscularis. 3 are mainly submucosa. 8.6 Small Intestine Small Intestine - Terminal Ileum 0001211 154 997 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991808 443870 0.972545 0.993458 0.84458 24567 1 76 0.00236445 275 0 9.90191e+07 0.0268948 491065 9.96711e+07 6.3098e+06 24595 4.92934e+07 0 0.127965 0.993458 0.839055 9.90191e+07 0.00341977 2.18485e+07 1.3211e+07 2.21085e+07 319 2.20603e+07 1.75763e+07 0.00289123 2.20493e+07 49.9876 0.00492685 0.995109 0 50.2958 GTEX-Y5LM-1726-SM-4VDSX 1 B1 2 pieces. 16x9 & 14x6mm; Ducts and lobules present. Larger piece good; smaller is mainly adipose. 8.2 Breast Breast - Mammary Tissue 0008367 168 983 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990957 375121 0.96975 0.992454 0.814926 24107 1 76 0.00234806 196 0 8.03867e+07 0.0298379 356178 8.09979e+07 5.35649e+06 24131 3.99748e+07 0 0.154824 0.992454 0.808776 8.03867e+07 0.00348824 1.75557e+07 8.04368e+06 1.76604e+07 210 1.7603e+07 1.3123e+07 0.00291729 1.77336e+07 50.1848 0.00439737 0.993951 0 50.1486 GTEX-Y5LM-1826-SM-4VDT9 0 B1 2 pieces. 11x9 & 12x11mm; 30% glands in 1, 10% in other; both good (marked). Too much surface epithelium and fibrous stroma 9.5 Salivary Gland Minor Salivary Gland 0006330 179 972 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991513 546587 0.971505 0.993091 0.8415 22288 1 76 0.00236438 206 0 8.93616e+07 0.0282649 344215 8.99834e+07 5.80016e+06 22305 4.44773e+07 0 0.130004 0.993091 0.835686 8.93616e+07 0.0035741 1.99247e+07 1.72353e+07 2.01186e+07 232 2.00593e+07 1.62983e+07 0.00296828 2.013e+07 50.088 0.00382532 0.994668 0 50.242 GTEX-Y5LM-1926-SM-5RQJH 1 B1 6 pieces. up to 10x3.5mm; 5 of 6 have well trimmed deep aspect. 7 Skin Skin - Sun Exposed (Lower leg) 0004264 187 964 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.989803 229539 0.974349 0.991327 0.810102 21726 1 76 0.00207253 139 0 5.34599e+07 0.0254655 454246 5.39277e+07 3.00328e+06 21742 2.65687e+07 0 0.164247 0.991327 0.803076 5.34599e+07 0.00303971 1.18021e+07 5.18327e+06 1.18662e+07 142 1.18406e+07 8.6064e+06 0.00255538 1.19121e+07 50.1505 0.00842325 0.992851 0 50.1354 GTEX-Y5LM-2126-SM-4VDSY 1 B1 2 pieces. 19x12 & 16.5x15mm; specimen sequenced and fingerprint confirmed as match to other donor specimens 8.2 Muscle Muscle - Skeletal 0011907 191 960 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.992756 315003 0.983065 0.994205 0.880377 20789 1 76 0.00202288 377 0 9.82972e+07 0.0167713 1.24859e+06 9.88701e+07 6.19803e+06 20801 4.89659e+07 0 0.102688 0.994205 0.875275 9.82972e+07 0.00306561 2.16423e+07 1.4765e+07 2.20333e+07 348 2.20185e+07 1.63596e+07 0.00254349 2.17834e+07 49.7316 0.0126286 0.995654 0 50.4476 GTEX-Y5LM-2226-SM-4VDT1 1 B1 4 pieces. up to 6x4mm; Well dissected. 7.6 Nerve Nerve - Tibial 0001323 197 954 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991869 245222 0.970956 0.992871 0.818132 23563 1 76 0.00229548 275 0 8.93269e+07 0.028821 394482 8.99683e+07 6.19338e+06 23591 4.44287e+07 0 0.152824 0.992871 0.812299 8.93269e+07 0.00333283 1.96291e+07 8.27039e+06 1.96887e+07 276 1.96197e+07 1.37691e+07 0.00281364 1.97884e+07 50.214 0.00438468 0.993873 0 50.0758 GTEX-Y5LM-2326-SM-5S2NK 0 B1 2 pieces. 4x3 & 5x4mm; Well dissected. 6.5 Blood Vessel Artery - Tibial 0007610 198 953 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99159 188028 0.976796 0.993359 0.814188 20710 1 76 0.00174555 144 0 6.18413e+07 0.0228418 358634 6.22548e+07 4.78453e+06 20731 3.0754e+07 0 0.162608 0.993359 0.80878 6.18413e+07 0.00264093 1.3486e+07 4.66282e+06 1.36076e+07 153 1.35521e+07 1.08775e+07 0.00219244 1.36505e+07 50.1808 0.00576075 0.995127 0 50.2246 GTEX-Y5V5-0001-SM-4V6FZ B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 115 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992196 1.19323e+06 0.962553 0.993311 0.816574 21863 1 76 0.0025615 222 0 1.03669e+08 0.0363915 596374 1.04368e+08 7.20956e+06 21902 5.1569e+07 0 0.145979 0.993311 0.811112 1.03669e+08 0.00297421 2.30064e+07 2.04819e+07 2.30288e+07 232 2.31176e+07 2.43747e+07 0.00276762 2.30454e+07 49.9218 0.00571417 0.994425 0 50.0244 GTEX-Y5V5-0002-SM-4YUV2 B1 Blood Whole Blood 0013756 115 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y5V5-0002-SM-53IUG B1 Blood Whole Blood 0013756 115 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Y5V5-0002-SM-6UH3T B1 Blood Whole Blood 0013756 115 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 LCSET-6032 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y5V5-0006-SM-4V6FE B1 8.6 Blood Whole Blood 0013756 115 BP-33568 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.965686 668278 0.97247 0.966872 0.792441 18296 1 76 0.00213209 101 0 9.11116e+07 0.0267699 152836 9.42334e+07 6.25223e+06 18303 4.53472e+07 0 0.180029 0.966872 0.766189 9.11116e+07 0.00275648 2.08819e+07 1.51256e+08 2.17989e+07 137 2.18141e+07 2.4531e+07 0.0024439 2.09896e+07 49.0368 0.00162189 0.968058 0 51.0742 GTEX-Y5V5-0126-SM-5S2NW 0 B1 6 pieces, up to 12.5x4mm; squamous epitheium is ~2% thickness 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 138 547 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991468 309070 0.970319 0.993386 0.778289 23499 1 76 0.0018773 149 0 6.24766e+07 0.0294637 432640 6.28926e+07 4.52694e+06 23516 3.10729e+07 0 0.19203 0.993386 0.773141 6.24766e+07 0.00274146 1.36202e+07 5.65138e+06 1.37703e+07 150 1.37284e+07 1.01922e+07 0.00230855 1.37804e+07 50.0946 0.00687903 0.995303 0 50.2741 GTEX-Y5V5-0226-SM-5S2N8 1 B1 2 pieces, 20x13 & 18x12mm; 6.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 140 545 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991614 220100 0.971694 0.992976 0.782967 22282 1 76 0.00187821 131 0 6.05554e+07 0.0279824 387703 6.09837e+07 4.49178e+06 22306 3.0126e+07 0 0.188727 0.992976 0.777467 6.05554e+07 0.00276779 1.32416e+07 6.74608e+06 1.34068e+07 146 1.33343e+07 9.93213e+06 0.00232239 1.33987e+07 50.1206 0.00635749 0.994337 0 50.31 GTEX-Y5V5-0326-SM-5RQJG 1 B1 2 pieces, 11x10 & 12.5x9mm; multiple small (1-2mm) colloid cysts 6.8 Thyroid Thyroid 0002046 144 541 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.992063 237507 0.966417 0.99308 0.754454 23034 1 76 0.00213168 124 0 6.13448e+07 0.0332951 601101 6.17723e+07 2.94936e+06 23058 3.05354e+07 0 0.211963 0.99308 0.749233 6.13448e+07 0.00292247 1.347e+07 5.9607e+06 1.35396e+07 141 1.35316e+07 9.34614e+06 0.00252667 1.35385e+07 50.0129 0.00973091 0.994097 0 50.1287 GTEX-Y5V5-0426-SM-4VBPU 1 B1 6 pieces, up to 10x3mm; ~0.2mm layer discontinuous atherosis 8.2 Blood Vessel Artery - Aorta 0001496 147 538 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.984076 347296 0.977344 0.989374 0.839935 23696 1 76 0.0030953 276 0 1.06968e+08 0.0221029 431969 1.08117e+08 1.10131e+07 23717 5.30114e+07 0 0.137409 0.989374 0.83101 1.06968e+08 0.00568466 2.31395e+07 8.75567e+06 2.32004e+07 270 2.33677e+07 2.03496e+07 0.00438305 2.35265e+07 50.1692 0.00399539 0.994672 0 50.0657 GTEX-Y5V5-0626-SM-4VBPX 1 B1 2 pieces, 13x8 & 15x12mm; remarkably minimal interstitial fibrosis given degree of atherosclerosis of coronary artery 7.1 Heart Heart - Left Ventricle 0006566 170 515 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.987698 217696 0.98305 0.99179 0.830538 22075 1 76 0.0031945 368 0 1.08947e+08 0.0168155 5.21959e+06 1.09849e+08 1.10961e+07 22100 5.41375e+07 0 0.152512 0.99179 0.823719 1.08947e+08 0.00522681 2.42065e+07 1.95828e+07 2.44861e+07 373 2.44861e+07 1.13082e+07 0.00420646 2.46075e+07 50.1237 0.047516 0.995882 0 50.2871 GTEX-Y5V5-0726-SM-4VBPY 1 B1 2 pieces, 10x7 & 6x5mm; 7.2 Heart Heart - Atrial Appendage 0006631 175 510 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.988028 272823 0.98094 0.992018 0.811276 23021 1 76 0.00309178 369 0 1.10342e+08 0.0188507 3.57869e+06 1.1123e+08 1.05238e+07 23044 5.48303e+07 0 0.169665 0.992018 0.8048 1.10342e+08 0.00511231 2.37818e+07 1.49229e+07 2.40322e+07 336 2.41251e+07 1.47145e+07 0.00409799 2.40878e+07 49.9613 0.0321739 0.996007 0 50.2618 GTEX-Y5V5-0826-SM-4VBQD 1 B1 2 pieces, 10x7 & 12.5x8.5mm; emphysematous changes, carbon particle deposition, rep foci delineated 9.7 Lung Lung 0008952 179 506 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.98577 399943 0.973501 0.989729 0.771397 25326 1 76 0.00339025 276 0 1.1036e+08 0.0258922 376156 1.11506e+08 1.02701e+07 25373 5.478e+07 0 0.202104 0.989729 0.763474 1.1036e+08 0.00539308 2.44233e+07 1.1344e+07 2.45009e+07 292 2.46746e+07 1.81702e+07 0.00438766 2.46778e+07 50.0033 0.00337342 0.993689 0 50.0793 GTEX-Y5V5-0926-SM-4VBPZ 1 B1 2 pieces, 10x10 & 11x10mm; mild-moderate macrovesicular steatosis involving ~30-40% of parenchyma 7 Liver Liver 0001114 188 497 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.985405 428176 0.97203 0.989476 0.783632 22646 1 76 0.00335809 268 0 1.04135e+08 0.0272229 1.51123e+06 1.05242e+08 1.05843e+07 22672 5.16824e+07 0 0.188398 0.989476 0.775385 1.04135e+08 0.00537053 2.24446e+07 1.53625e+07 2.27227e+07 270 2.28176e+07 1.527e+07 0.00436017 2.27416e+07 49.9166 0.0143595 0.993548 0 50.3078 GTEX-Y5V5-1026-SM-5LUAH 1 B1 2 pieces, 14x12 & 14x11mm; incidental neuroendocrine tumor ~2.5mm d (Islet cell tumor), encircled. Well visualized islets, rep. ones delineated. 6.8 Pancreas Pancreas 0001150 190 495 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 EXCLUDE 0.98977 313066 0.979528 0.992265 0.845333 20571 1 76 0.00452621 102 0 6.46887e+07 0.0202462 249484 6.51929e+07 5.70573e+06 20588 3.21426e+07 0 0.134195 0.992265 0.838794 6.46887e+07 0.00400358 1.47722e+07 2.12847e+07 1.50249e+07 112 1.49404e+07 1.993e+07 0.00426555 1.50226e+07 50.1372 0.00382686 0.994761 0 50.4241 GTEX-Y5V5-1126-SM-EVYAR 1 B1 2 pieces, 11x10 & 13x11mm; 5.5 Spleen Spleen 0002106 193 492 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.988725 367388 0.958592 0.989255 0.705513 24609 1 76 0.00231219 165 0 8.76793e+07 0.0408464 716041 8.86317e+07 3.8539e+06 24647 4.36768e+07 0 0.253079 0.989255 0.697932 8.76793e+07 0.00341536 1.91411e+07 1.23579e+07 1.92903e+07 197 1.92538e+07 1.156e+07 0.00286348 1.92322e+07 49.9719 0.00807884 0.989785 0 50.1941 GTEX-Y5V5-1226-SM-EYYVP 1 B1 6 pieces, up to 7x3mm; glomeruli seen; patchy chronic interstitial nephritis; lymphoid aggregates delineated (rep). 5.6 Kidney Kidney - Cortex 0001225 198 487 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.989597 156299 0.975427 0.991627 0.817548 23921 1 76 0.00242666 267 0 8.93494e+07 0.0244012 4.65346e+06 9.01038e+07 2.86101e+06 23940 4.44966e+07 0 0.157879 0.991627 0.810703 8.93494e+07 0.00303862 1.97202e+07 1.70456e+07 2.00036e+07 312 1.99517e+07 7.61892e+06 0.00273201 1.99263e+07 49.9681 0.0516456 0.993657 0 50.3568 GTEX-Y5V5-1326-SM-4V6G9 2 B1 2 pieces, 12x8 & 12x8mm; all cortex, moderate-severe autolysis 7.5 Adrenal Gland Adrenal Gland 0002369 201 484 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993294 761904 0.970952 0.994199 0.781252 23991 1 76 0.00232533 373 0 1.46364e+08 0.028767 2.98113e+06 1.47218e+08 1.05776e+07 24034 7.28509e+07 0 0.1897 0.994199 0.77672 1.46364e+08 0.00280637 3.19197e+07 1.99208e+07 3.22379e+07 396 3.22374e+07 2.13864e+07 0.00256563 3.20605e+07 49.8625 0.0202498 0.995103 0 50.248 GTEX-Y5V5-1426-SM-EYYVT 1 B1 6 pieces, up to 12x4mm; all muscle; good specimens 5.6 Esophagus Esophagus - Muscularis 0004648 209 476 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.984742 161432 0.970617 0.987906 0.820218 21783 1 76 0.00218631 161 0 7.02123e+07 0.0291939 1.31082e+06 7.10719e+07 2.73236e+06 21798 3.49037e+07 0 0.1504 0.987906 0.810298 7.02123e+07 0.00295386 1.50466e+07 5.39755e+06 1.52049e+07 181 1.52001e+07 1.07484e+07 0.00256885 1.52544e+07 50.0891 0.0184436 0.991069 0 50.2616 GTEX-Y5V5-1526-SM-4VBQ1 1 B1 6 pieces, up to 9x3mm; all muscle, good specimens. Sub-mucosal mucinous glands noted in several sections, rep. ones delineated 6.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 211 474 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.986069 264855 0.97049 0.990156 0.785184 23882 1 76 0.00312947 206 0 9.84405e+07 0.0292893 1.42197e+06 9.94191e+07 9.44933e+06 23919 4.88616e+07 0 0.185306 0.990156 0.777454 9.84405e+07 0.00523488 2.13509e+07 8.52669e+06 2.13721e+07 254 2.14517e+07 1.44234e+07 0.00417783 2.16561e+07 50.2372 0.0143027 0.994243 0 50.0248 GTEX-Y5V5-1626-SM-4VDSG 1 B1 6 pieces, up to 10x2mm; squamous mucosa is ~10-15% of thickness 9.1 Esophagus Esophagus - Mucosa 0006920 214 471 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990827 712547 0.965176 0.992501 0.796846 23729 1 76 0.00251261 281 0 1.14014e+08 0.0345349 558388 1.14875e+08 7.38997e+06 23755 5.67658e+07 0 0.16833 0.992501 0.79087 1.14014e+08 0.00364122 2.54581e+07 2.84939e+07 2.55364e+07 312 2.5573e+07 2.14354e+07 0.00307596 2.5621e+07 50.0469 0.00486082 0.994175 0 50.0768 GTEX-Y5V5-1826-SM-4VDS5 2 B1 6 pieces, up to 11x2mm; actually ileum, lymphoid elements are ~15% of specimen 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 228 457 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990303 570142 0.955831 0.991497 0.817606 24026 1 76 0.00251535 372 0 9.89735e+07 0.0439955 1.76762e+06 9.98223e+07 6.91181e+06 24053 4.92201e+07 0 0.138225 0.991497 0.810654 9.89735e+07 0.00360677 2.09686e+07 2.02907e+07 2.1278e+07 350 2.11756e+07 1.27182e+07 0.0030604 2.11978e+07 50.0262 0.0177076 0.992692 0 50.3663 GTEX-Y5V5-2126-SM-4WWFO 1 B1 2 pieces, 16x13 & 17x12mm; mainly fibroadipose tissue, a few atrophic ductal elements noted, rep ones delineated 7.5 Breast Breast - Mammary Tissue 0008367 247 438 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986786 263522 0.973419 0.989438 0.802555 24682 1 76 0.00262937 211 0 8.32444e+07 0.0262044 630028 8.4133e+07 1.14972e+07 24713 4.13842e+07 0 0.170864 0.989438 0.794079 8.32444e+07 0.003907 1.8356e+07 8.81506e+06 1.83454e+07 206 1.83859e+07 1.50323e+07 0.00326647 1.85277e+07 50.1921 0.00748847 0.99209 0 49.9856 GTEX-Y5V5-2326-SM-4V6GA 0 B1 6 pieces, up to 12x2.5mm; squamous epithelium is ~1-2% thickness 8.4 Skin Skin - Sun Exposed (Lower leg) 0004264 266 419 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991831 431321 0.969334 0.992591 0.788081 24014 1 76 0.00239991 207 0 8.5427e+07 0.030419 405791 8.60646e+07 6.61292e+06 24046 4.24847e+07 0 0.181253 0.992591 0.782242 8.5427e+07 0.00302625 1.85665e+07 9.70273e+06 1.85153e+07 196 1.85333e+07 1.52409e+07 0.00271284 1.86205e+07 50.1174 0.00471496 0.993351 0 49.931 GTEX-Y5V5-2426-SM-5IFJA 1 B1 2 pieces, 12x11 & 15x7.5mm; ~19% fibrous tissue, delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 269 416 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.98926 208531 0.976815 0.991344 0.805134 23766 1 76 0.00304821 175 0 8.15867e+07 0.0228955 538797 8.2299e+07 6.00417e+06 23792 4.05963e+07 0 0.171681 0.991344 0.798165 8.15867e+07 0.00389025 1.79799e+07 7.40559e+06 1.81639e+07 186 1.81688e+07 1.46268e+07 0.00346835 1.81404e+07 49.9609 0.00654682 0.993428 0 50.2545 GTEX-Y5V5-2526-SM-4VBQ4 1 B1 2 pieces, 9x9 & 9x7mm; <1% interstitial fat 8.8 Muscle Muscle - Skeletal 0011907 272 413 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.989533 328902 0.978725 0.992817 0.865723 23042 1 76 0.00273951 376 0 1.23698e+08 0.0209609 1.06860e+06 1.24593e+08 1.20486e+07 23066 6.15182e+07 0 0.113003 0.992817 0.859504 1.23698e+08 0.00447426 2.58117e+07 1.32557e+07 2.59683e+07 331 2.60319e+07 2.71683e+07 0.00360402 2.61353e+07 50.0991 0.00857674 0.9961 0 50.1512 GTEX-Y5V5-2626-SM-5IFJM 0 B1 4 pieces, up to 6x5mm; good clean specimens 6.5 Nerve Nerve - Tibial 0001323 273 412 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.987889 190324 0.968196 0.989836 0.738602 24133 1 76 0.00315326 162 0 7.42732e+07 0.0315533 408439 7.50359e+07 5.41592e+06 24171 3.6943e+07 0 0.229594 0.989836 0.731095 7.42732e+07 0.0039881 1.63654e+07 6.40836e+06 1.64518e+07 160 1.64418e+07 1.10385e+07 0.00356986 1.65151e+07 50.1112 0.00544325 0.991783 0 50.1316 GTEX-Y5V5-2726-SM-4VDS2 0 B1 2 pieces, 3x2.5 & 4x3mm; one aliquot has ~0.5mm nubbin of adherent fat/fibrous tissue 7.6 Blood Vessel Artery - Tibial 0007610 274 411 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.99028 304222 0.9639 0.991421 0.856762 21415 1 76 0.00245087 207 0 8.00263e+07 0.0359043 787098 8.07188e+07 5.98868e+06 21427 3.97671e+07 0 0.107138 0.991421 0.849412 8.00263e+07 0.00359287 1.67969e+07 8.53089e+06 1.70235e+07 245 1.68238e+07 1.14839e+07 0.00302122 1.70914e+07 50.3945 0.00975112 0.992562 0 50.335 GTEX-Y5V6-0001-SM-4YUXD B1 Blood Whole Blood 0013756 -35 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y5V6-0001-SM-53IVM B1 Blood Whole Blood 0013756 -35 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Y5V6-0001-SM-6UH32 B1 Blood Whole Blood 0013756 -35 BP-33598 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/27/2012 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y5V6-0003-SM-4V6FX B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -35 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993188 766202 0.964766 0.994281 0.796891 21985 1 76 0.00232099 221 0 1.02297e+08 0.0348888 767393 1.02885e+08 6.99279e+06 22023 5.09519e+07 0 0.167875 0.994281 0.792333 1.02297e+08 0.00272395 2.27598e+07 1.97807e+07 2.28472e+07 236 2.2901e+07 2.28342e+07 0.00252225 2.28257e+07 49.9176 0.00745874 0.995374 0 50.0958 GTEX-Y5V6-0005-SM-4V6FD B1 8.5 Blood Whole Blood 0013756 -35 BP-33568 RNA isolation_PAXgene Blood RNA (Manual) 11/26/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.990316 1.2276e+06 0.943769 0.991488 0.767563 18796 1 76 0.00244242 141 0 9.37713e+07 0.0558548 202791 9.45764e+07 6.93849e+06 18808 4.66708e+07 0 0.176206 0.991488 0.761029 9.37713e+07 0.00307983 2.03406e+07 8.62135e+07 2.07945e+07 168 2.08138e+07 1.93874e+07 0.00276075 2.04644e+07 49.5768 0.0021442 0.99266 0 50.5517 GTEX-Y5V6-0008-SM-4V6FV B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 210 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.994654 580488 0.975828 0.995619 0.864452 20432 1 76 0.00191281 224 0 9.65137e+07 0.0238389 390081 9.69383e+07 6.48430e+06 20447 4.81013e+07 0 0.111377 0.995619 0.860665 9.65137e+07 0.00225786 2.16041e+07 1.67373e+07 2.17327e+07 240 2.17439e+07 2.52184e+07 0.00208516 2.16957e+07 49.9445 0.00402401 0.996585 0 50.1484 GTEX-Y5V6-0226-SM-4V6G7 1 B1 2 pieces, 8x7 & 8x6.5mm; focal emphysema 8.5 Lung Lung 0008952 100 1354 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993468 309814 0.974356 0.994351 0.809806 24266 1 76 0.00233372 203 0 8.6712e+07 0.0251118 580747 8.72046e+07 6.12316e+06 24292 4.31743e+07 0 0.16455 0.994351 0.805232 8.6712e+07 0.0027667 1.92487e+07 8.11586e+06 1.93704e+07 207 1.93591e+07 1.62126e+07 0.00255002 1.93372e+07 49.9717 0.00665959 0.995235 0 50.1575 GTEX-Y5V6-0326-SM-4VBRW 1 B1 2 pieces, 2x2 & 3x2.5mm; no significant plaques 7.4 Blood Vessel Artery - Coronary 0001621 114 1341 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.9836 355657 0.976078 0.989458 0.854525 22613 1 76 0.00287234 204 0 9.18388e+07 0.0236141 491634 9.28174e+07 9.4851e+06 22634 4.55103e+07 0 0.121553 0.989458 0.845516 9.18388e+07 0.00562496 1.98631e+07 7.35974e+06 1.99487e+07 218 2.00584e+07 1.81518e+07 0.0042405 2.02717e+07 50.2645 0.00529679 0.995315 0 50.1075 GTEX-Y5V6-0426-SM-4VBRZ 1 B1 6 pieces, up to 8x2mm; well dissected; flat plaques 8.1 Blood Vessel Artery - Aorta 0001496 116 1340 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.988854 249400 0.978295 0.992315 0.845611 23670 1 76 0.0029685 276 0 1.06933e+08 0.0213312 468590 1.07761e+08 1.07832e+07 23692 5.3158e+07 0 0.132684 0.992315 0.839113 1.06933e+08 0.0048447 2.34182e+07 9.17512e+06 2.35123e+07 307 2.36108e+07 2.15484e+07 0.00390333 2.36771e+07 50.0702 0.00434843 0.995776 0 50.1002 GTEX-Y5V6-0526-SM-4VBRV 1 B1 2 pieces, 8x7 & 7.5x6mm; a few small focal lymphoid collections 7.1 Thyroid Thyroid 0002046 125 1332 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.9846 319569 0.970083 0.989543 0.784544 24352 1 76 0.0030475 194 0 9.27732e+07 0.0296608 417305 9.37536e+07 9.48756e+06 24395 4.60176e+07 0 0.185539 0.989543 0.77634 9.27732e+07 0.00543649 2.03303e+07 8.07666e+06 2.03159e+07 210 2.04293e+07 1.50828e+07 0.00423603 2.06557e+07 50.2755 0.00445108 0.994486 0 49.9823 GTEX-Y5V6-0626-SM-4WWFY 0 B1 2 pieces, 11x8 & 11x8mm; no holes 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 127 1330 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986652 263419 0.975422 0.989731 0.842535 23438 1 76 0.00251555 276 0 8.72489e+07 0.0242949 742741 8.81541e+07 1.1929e+07 23458 4.33706e+07 0 0.132887 0.989731 0.833883 8.72489e+07 0.00412027 1.92126e+07 9.78147e+06 1.92683e+07 267 1.92833e+07 1.51214e+07 0.00331541 1.94569e+07 50.2241 0.00842548 0.99281 0 50.0724 GTEX-Y5V6-0826-SM-4VBRU 1 B1 2 pieces, 10x7 & 9x7mm; 1 is 80% external adipose; other has 10% internal adipose; hypertrophied fibers 8.1 Heart Heart - Left Ventricle 0006566 136 1323 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.98747 304830 0.98391 0.991422 0.855792 21436 1 76 0.00304969 369 0 1.08177e+08 0.0158759 2.97774e+06 1.09113e+08 1.07711e+07 21450 5.37564e+07 0 0.128118 0.991422 0.848451 1.08177e+08 0.0049845 2.3677e+07 2.32643e+07 2.39704e+07 347 2.39691e+07 1.54247e+07 0.00401324 2.40598e+07 50.0944 0.0272905 0.995374 0 50.3079 GTEX-Y5V6-1026-SM-4VBS2 1 B1 6 pieces, up to 7x2mm; well dissected 9.4 Esophagus Esophagus - Mucosa 0006920 145 1315 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.988563 290435 0.977983 0.992134 0.844296 23101 1 76 0.00299695 214 0 9.71233e+07 0.0215623 700223 9.78933e+07 9.53159e+06 23123 4.82726e+07 0 0.133687 0.992134 0.837655 9.71233e+07 0.00491902 2.18263e+07 1.1098e+07 2.18969e+07 244 2.19946e+07 1.94542e+07 0.00395453 2.20729e+07 50.0889 0.00715292 0.995705 0 50.0807 GTEX-Y5V6-1126-SM-4VDTD 0 B1 6 pieces, up to 7x5mm; well dissected; prominent focus of ganglion cell marked 8.5 Esophagus Esophagus - Muscularis 0004648 149 1312 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.992129 648043 0.962939 0.993606 0.848361 22120 1 76 0.00230854 272 0 9.37465e+07 0.0368347 1.25973e+06 9.43497e+07 6.16097e+06 22136 4.66541e+07 0 0.114577 0.993606 0.842937 9.37465e+07 0.00344362 1.98239e+07 1.98655e+07 2.00062e+07 317 1.98796e+07 1.49911e+07 0.00287524 2.00945e+07 50.2688 0.0133517 0.995083 0 50.2288 GTEX-Y5V6-1226-SM-4VDTE 0 B1 6 pieces, up to 6x3.5mm; 10, 30, & 60% periesophageal stroma in 3 pieces. 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 156 1305 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990607 392207 0.975643 0.991991 0.859957 23128 1 76 0.00240328 372 0 1.00135e+08 0.0241683 2.34554e+06 1.00944e+08 6.86224e+06 23150 4.97912e+07 0 0.115686 0.991991 0.85307 1.00135e+08 0.00363788 2.20908e+07 1.09573e+07 2.24143e+07 370 2.22346e+07 1.41838e+07 0.00301972 2.24083e+07 50.1945 0.0232361 0.993375 0 50.3635 GTEX-Y5V6-1326-SM-4VDTF 2 B1 6 pieces, up to 9x3mm; foveolar (surface) glands autolyzed; only 1 of 6 has muscularis 6 Stomach Stomach 0000945 161 1301 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.987313 651152 0.972318 0.989111 0.858726 21754 1 76 0.0024613 419 0 1.03067e+08 0.027288 3.03668e+06 1.04202e+08 6.84372e+06 21769 5.12384e+07 0 0.113592 0.989111 0.849376 1.03067e+08 0.00367374 2.29459e+07 1.01806e+08 2.39426e+07 365 2.37934e+07 2.00277e+07 0.00306642 2.32678e+07 49.4416 0.0291423 0.990909 0 51.0628 GTEX-Y5V6-1626-SM-4VDT2 1 B1 6 pieces, up to 8x5mm; 3 of 6 have mucosa only; 3 of 6 have mucosa and muscularis 7.4 Colon Colon - Sigmoid 0001159 174 1291 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.989102 597820 0.964508 0.990868 0.782055 24336 1 76 0.00287445 228 0 8.70461e+07 0.0339564 1.36741e+06 8.78484e+07 5.84499e+06 24373 4.32019e+07 0 0.182454 0.990868 0.774913 8.70461e+07 0.00409162 1.92075e+07 1.44394e+07 1.93061e+07 224 1.92725e+07 1.17854e+07 0.00348195 1.93905e+07 50.1525 0.0155656 0.992634 0 50.128 GTEX-Y5V6-1726-SM-4VDSZ 1 B1 2 pieces, 10x7 & 9x8mm; spermatogenesis 7 Testis Testis 0000473 181 1284 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990802 503893 0.928066 0.992434 0.74184 33618 1 76 0.00243136 220 0 9.52172e+07 0.0716473 1.14667e+06 9.59431e+07 6.1957e+06 33686 4.73878e+07 0 0.186226 0.992434 0.736227 9.52172e+07 0.00352999 1.97333e+07 1.41181e+07 1.99711e+07 222 1.99878e+07 1.46672e+07 0.00297977 1.98529e+07 49.8307 0.0119516 0.994065 0 50.2994 GTEX-Y5V6-1926-SM-5IFIL 1 B1 2 pieces, 9x8 & 8x8mm; each has 30-40% adipose 8.2 Adrenal Gland Adrenal Gland 0002369 188 1279 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.99144 153870 0.976923 0.993138 0.837969 22825 1 76 0.00306758 157 0 7.49963e+07 0.0227593 1.66879e+06 7.55145e+07 5.76892e+06 22845 3.73554e+07 0 0.138953 0.993138 0.832219 7.49963e+07 0.00365089 1.65434e+07 1.00688e+07 1.6643e+07 202 1.66045e+07 1.21773e+07 0.00335874 1.67082e+07 50.1557 0.0220989 0.994836 0 50.1502 GTEX-Y5V6-2026-SM-5IFHO 1 B1 6 pieces, up to 7x3mm; no vascular sclerosis; mild nonspecific increase in glomerular mesangial matrix, but no glomerular sclerosis. 6.5 Kidney Kidney - Cortex 0001225 191 1278 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991569 143783 0.980849 0.992998 0.837984 21753 1 76 0.00326786 265 0 8.08786e+07 0.0189794 2.37401e+06 8.14489e+07 5.38164e+06 21764 4.0302e+07 0 0.142865 0.992998 0.832116 8.08786e+07 0.00385108 1.76233e+07 2.67126e+07 1.79117e+07 266 1.76145e+07 9.17016e+06 0.00355905 1.80407e+07 50.5977 0.0291472 0.994426 0 50.4059 GTEX-Y5V6-2126-SM-4WWFX 0 B1 2 pieces, 10x7 & 10x8mm; no ducts, all adipose, several holes 6.1 Breast Breast - Mammary Tissue 0008367 194 1276 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986854 336232 0.975606 0.98955 0.819747 23613 1 76 0.00257036 279 0 9.13267e+07 0.0241364 543258 9.22911e+07 1.23605e+07 23647 4.5409e+07 0 0.155859 0.98955 0.81118 9.13267e+07 0.00403369 2.01974e+07 9.93527e+06 2.02005e+07 269 2.02448e+07 1.59404e+07 0.00330003 2.03901e+07 50.1789 0.00588635 0.992246 0 50.0039 GTEX-Y5V6-2226-SM-4VDTC 1 B1 2 pieces, 3x2 & 3x2mm; 2 well dissected glandular clusters with 40-50% internal adipose; moderate duct dilatation and gland atrophy 8.1 Salivary Gland Minor Salivary Gland 0006330 197 1275 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990158 458654 0.968356 0.991682 0.813484 24487 1 76 0.00275245 210 0 8.97501e+07 0.0302884 526471 9.05029e+07 5.93175e+06 24514 4.45908e+07 0 0.154872 0.991682 0.806717 8.97501e+07 0.00392512 1.98022e+07 1.38519e+07 1.99533e+07 232 1.99357e+07 1.45816e+07 0.00333788 1.99573e+07 50.027 0.00581717 0.993206 0 50.1901 GTEX-Y5V6-2326-SM-4VDSA 0 B1 6 pieces, up to 8x5mm; well dissected 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 207 1265 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.988803 447263 0.965384 0.990274 0.842582 23754 1 76 0.00249183 276 0 9.02236e+07 0.0344648 1.33691e+06 9.11097e+07 6.18207e+06 23775 4.48533e+07 0 0.122802 0.990274 0.834387 9.02236e+07 0.00369899 1.96257e+07 1.3616e+07 1.99761e+07 288 1.98235e+07 1.26575e+07 0.00309451 1.99184e+07 50.1193 0.0146736 0.991745 0 50.4424 GTEX-Y5V6-2426-SM-4VDSB 0 B1 6 pieces, up to 7x4mm; well dissected 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 212 1261 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.989685 402471 0.96479 0.991164 0.836009 24000 1 76 0.00249762 278 0 9.00683e+07 0.0350617 871654 9.08712e+07 6.28079e+06 24026 4.47904e+07 0 0.128781 0.991164 0.828622 9.00683e+07 0.00363354 1.94713e+07 1.28552e+07 1.98735e+07 278 1.97542e+07 1.30508e+07 0.00306473 1.97229e+07 49.9604 0.00959219 0.992643 0 50.5111 GTEX-Y5V6-2526-SM-5IFJV 0 B1 2 pieces, 9x9 & 9x7mm; several centrall holes 6.2 Adipose Tissue Adipose - Subcutaneous 0002190 215 1259 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988883 150259 0.980089 0.990971 0.862964 22376 1 76 0.00294822 168 0 7.35558e+07 0.0196278 671649 7.4226e+07 5.43e+06 22389 3.65958e+07 0 0.117124 0.990971 0.855172 7.35558e+07 0.00381648 1.61945e+07 6.8796e+06 1.6279e+07 179 1.62543e+07 1.46363e+07 0.00338144 1.63702e+07 50.1777 0.0090487 0.993058 0 50.13 GTEX-Y5V6-2626-SM-5IFIX 1 B1 2 pieces, 9x7 & 9x9mm; focal atrophy; 1 has 20% internal and external adipose 7.8 Muscle Muscle - Skeletal 0011907 218 1256 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992039 185138 0.983465 0.993772 0.879256 19383 1 76 0.00294984 204 0 8.14861e+07 0.0163402 1.31572e+06 8.19968e+07 6.5779e+06 19388 4.05922e+07 0 0.104209 0.993772 0.873779 8.14861e+07 0.00358991 1.78746e+07 1.32127e+07 1.8007e+07 237 1.793e+07 1.51981e+07 0.00326932 1.80793e+07 50.2073 0.016046 0.995504 0 50.1845 GTEX-Y5V6-2726-SM-4VDSC 0 B1 2 pieces, 5x3 & 5x3mm; 1 has 20% external adipose 7.8 Nerve Nerve - Tibial 0001323 221 1254 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990335 302215 0.969317 0.991523 0.843353 22992 1 76 0.00241937 207 0 8.13823e+07 0.0304672 503674 8.2078e+07 6.06304e+06 23008 4.04443e+07 0 0.125964 0.991523 0.836204 8.13823e+07 0.00357855 1.77331e+07 7.45005e+06 1.79359e+07 237 1.78348e+07 1.20789e+07 0.00299827 1.7935e+07 50.1402 0.00613653 0.992711 0 50.2844 GTEX-Y5V6-2826-SM-4VDSF 0 B1 2 pieces, 3x2 & 3x2mm; large calcified deposits in one, up to 1 cm; other piece has small calfied deposit. 8.1 Blood Vessel Artery - Tibial 0007610 222 1253 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991507 437346 0.970124 0.992605 0.865743 21744 1 76 0.00230839 374 0 1.02119e+08 0.0296186 587679 1.0288e+08 7.05166e+06 21758 5.07684e+07 0 0.104381 0.992605 0.859341 1.02119e+08 0.0034496 2.16366e+07 1.08653e+07 2.17762e+07 372 2.16281e+07 1.63054e+07 0.00287836 2.18989e+07 50.3111 0.00571229 0.993704 0 50.1607 GTEX-Y8DK-0002-SM-4YUVY B1 Blood Whole Blood 0013756 932 BP-33757 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y8DK-0002-SM-53IV6 B1 Blood Whole Blood 0013756 932 BP-33757 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Y8DK-0002-SM-6UH1E B1 Blood Whole Blood 0013756 932 BP-33757 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 11/30/2012 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y8DK-0004-SM-4RGM7 B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 932 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.98893 1.05437e+06 0.964079 0.991761 0.77641 23256 1 76 0.00254025 220 0 1.083e+08 0.0354578 759873 1.092e+08 9.74544e+06 23301 5.383e+07 0 0.187669 0.991761 0.770014 1.083e+08 0.00309635 2.39546e+07 1.89386e+07 2.4067e+07 255 2.42086e+07 2.35407e+07 0.0028175 2.41171e+07 49.9053 0.00695855 0.994593 0 50.117 GTEX-Y8DK-0005-SM-4RGNR B1 7.5 Blood Whole Blood 0013756 932 BP-33855 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2012 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.949997 587137 0.979714 0.952217 0.804712 18559 1 76 0.00259163 102 0 9.16526e+07 0.0181228 174095 9.62517e+07 9.39293e+06 18563 4.54435e+07 0 0.175002 0.952217 0.76626 9.16526e+07 0.0038335 2.1304e+07 1.73247e+08 2.21939e+07 124 2.21566e+07 2.54798e+07 0.00321112 2.15635e+07 49.3217 0.00180875 0.954438 0 51.023 GTEX-Y8DK-0008-SM-4RGM2 B1 9.6 Skin Cells - Cultured fibroblasts EFO_0002009 1096 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991591 645598 0.97676 0.993982 0.862581 20473 1 76 0.00192038 177 0 8.03147e+07 0.022885 433526 8.08009e+07 7.37399e+06 20483 3.99648e+07 0 0.11418 0.993982 0.857389 8.03147e+07 0.00232202 1.78999e+07 1.2765e+07 1.80439e+07 173 1.80985e+07 2.06323e+07 0.00212072 1.80391e+07 49.9179 0.00536536 0.996373 0 50.2003 GTEX-Y8DK-0011-R10A-SM-4SOK1 B1, A1 8.9 Brain Brain - Frontal Cortex (BA9) 0009834 890 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.991265 646503 0.959356 0.993679 0.850533 22167 1 76 0.00219143 150 0 5.97316e+07 0.0401432 1.85368e+06 6.01116e+07 3.31771e+06 22177 2.97109e+07 0 0.108823 0.993679 0.845156 5.97316e+07 0.00263172 1.30328e+07 1.29991e+07 1.31213e+07 170 1.31341e+07 7.91957e+06 0.00241104 1.31633e+07 50.0555 0.0308373 0.996092 0 50.169 GTEX-Y8DK-0011-R10a-SM-AHZ7M B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 890 ChIP-Seq GTEX-Y8DK-0011-R11A-SM-4SOK2 B1, A1 9.1 Brain Brain - Cerebellar Hemisphere 0002037 890 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.983712 649628 0.939463 0.987361 0.716712 23002 1 76 0.00231359 129 0 6.3107e+07 0.0600265 1.00909e+06 6.39148e+07 3.57966e+06 23026 3.12921e+07 0 0.222751 0.987361 0.707653 6.3107e+07 0.00298662 1.34877e+07 1.3956e+07 1.35907e+07 150 1.36762e+07 7.93539e+06 0.00264886 1.36263e+07 49.9085 0.015788 0.99101 0 50.1903 GTEX-Y8DK-0011-R1A-SM-4RGLO B1, A1 7.1 Brain Brain - Hippocampus 0001954 890 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990544 579361 0.962908 0.993089 0.825977 22385 1 76 0.00257472 368 0 8.6982e+07 0.0369453 9.96234e+06 8.75872e+07 7.54345e+06 22397 4.32667e+07 0 0.136932 0.993089 0.820269 8.6982e+07 0.00324346 1.87959e+07 3.35125e+07 1.91268e+07 358 1.88797e+07 5.23611e+06 0.00290823 1.92467e+07 50.4813 0.113742 0.995635 0 50.4362 GTEX-Y8DK-0011-R3A-SM-4RTW5 B1, A1 6.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 890 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3905,LCSET-4214 10/17/2013 TruSeq.v1 RNASEQ 0.991878 774138 0.952841 0.993514 0.833233 23056 1 76 0.00224379 202 0 7.00709e+07 0.0468236 4.328e+06 7.05284e+07 3.12653e+06 23070 3.48671e+07 0 0.119608 0.993514 0.827828 7.00709e+07 0.00309139 1.51522e+07 1.85896e+07 1.54378e+07 224 1.53228e+07 7.59107e+06 0.00266689 1.53841e+07 50.0998 0.0613653 0.995149 0 50.4669 GTEX-Y8DK-0011-R4A-SM-EXUR1 B1, A1 5.5 Brain Brain - Amygdala 0001876 890 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-10976 05/25/2017 TruSeq.v1 RNASEQ 0.988531 252723 0.972936 0.989699 0.866439 20313 1 76 0.00199036 143 0 5.05629e+07 0.0268921 8.12146e+06 5.10892e+07 1.473e+06 20324 2.51758e+07 0 0.106496 0.989699 0.857514 5.05629e+07 0.00261308 1.11507e+07 8.80045e+06 1.1612e+07 175 1.13576e+07 3.54258e+06 0.00230135 1.1442e+07 50.1851 0.158966 0.990867 0 51.0133 GTEX-Y8DK-0011-R5B-SM-4RTW6 B1, A1 8.5 Brain Brain - Caudate (basal ganglia) 0001873 890 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3905 09/11/2013 TruSeq.v1 RNASEQ 0.992226 606740 0.951062 0.993893 0.809233 23157 1 76 0.0023219 133 0 5.77308e+07 0.0486398 3.2993e+06 5.80856e+07 3.1381e+06 23173 2.87339e+07 0 0.14183 0.993893 0.80429 5.77308e+07 0.00315469 1.23056e+07 1.70018e+07 1.27778e+07 164 1.27205e+07 6.06012e+06 0.0027376 1.24578e+07 49.4783 0.0568007 0.995559 0 50.9413 GTEX-Y8DK-0011-R6A-SM-4V6EG B1, A1 7.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 890 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992858 782869 0.954119 0.993757 0.816914 24514 1 76 0.00242496 373 0 9.27243e+07 0.0455758 5.56608e+06 9.33069e+07 6.42505e+06 24534 4.61441e+07 0 0.137205 0.993757 0.811814 9.27243e+07 0.00285596 2.01863e+07 2.04976e+07 2.04345e+07 342 2.03068e+07 1.04387e+07 0.00264027 2.04114e+07 50.1284 0.0596535 0.994656 0 50.3054 GTEX-Y8DK-0011-R7A-SM-4SOJZ B1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 890 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989701 666232 0.962744 0.992622 0.839602 22285 1 76 0.00242851 267 0 7.82637e+07 0.0370385 6.42213e+06 7.88454e+07 4.45049e+06 22295 3.8908e+07 0 0.123143 0.992622 0.833407 7.82637e+07 0.00309945 1.68909e+07 2.56597e+07 1.73698e+07 293 1.71519e+07 6.8264e+06 0.00276299 1.73254e+07 50.2516 0.0814522 0.995544 0 50.6989 GTEX-Y8DK-0011-R8B-SM-EYYVQ B1, A1 5.6 Brain Brain - Hypothalamus 0001898 890 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-10978 05/28/2017 TruSeq.v1 RNASEQ 0.982666 197314 0.969866 0.986458 0.859675 22109 1 76 0.00253935 276 0 7.44631e+07 0.0298384 7.76378e+06 7.54853e+07 2.93035e+06 22124 3.69948e+07 0 0.110191 0.986458 0.848033 7.44631e+07 0.00397405 1.63812e+07 1.35128e+07 1.66935e+07 297 1.65893e+07 6.63755e+06 0.00325394 1.67019e+07 50.1691 0.102851 0.99025 0 50.4722 GTEX-Y8DK-0126-SM-4TT3L 0 B1 6 pieces up to 8 x 3 mm. Well trimmed of subcutaneous adipose tissue. 8.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1100 581 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991141 527809 0.975771 0.99302 0.842104 24259 1 76 0.00247426 401 0 1.0598e+08 0.0239539 577315 1.06725e+08 8.7486e+06 24286 5.27085e+07 0 0.133667 0.99302 0.836226 1.0598e+08 0.0031363 2.31892e+07 1.42743e+07 2.3223e+07 335 2.32361e+07 2.02114e+07 0.00280466 2.33702e+07 50.1439 0.00540938 0.9949 0 50.0364 GTEX-Y8DK-0326-SM-4TT3P 0 B1 2 pieces 9 x 5 and 8 x 5 mm. 10% internal adipose. 8.6 Muscle Muscle - Skeletal 0011907 1105 578 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.992849 652205 0.982141 0.994614 0.88203 20372 1 76 0.00220022 270 0 1.09243e+08 0.0176124 986510 1.09835e+08 8.74469e+06 20384 5.43981e+07 0 0.100111 0.994614 0.877279 1.09243e+08 0.00269964 2.34963e+07 1.52845e+07 2.36519e+07 304 2.37107e+07 2.39999e+07 0.00244949 2.36278e+07 49.9125 0.00898176 0.996378 0 50.165 GTEX-Y8DK-0326-SM-CYKR1 0 B1 2 pieces 9 x 5 and 8 x 5 mm. 10% internal adipose. 8.6 Muscle Muscle - Skeletal 0011907 1105 578 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 RIP-Seq GTEX-Y8DK-0426-SM-4TT3Q 0 B1 2 pieces 4 x 3 and 4 x 3 mm. One piece with 10% adipose. 7 Nerve Nerve - Tibial 0001323 1110 574 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989091 820593 0.967115 0.991215 0.749866 25273 1 76 0.00260746 286 0 1.06719e+08 0.0325543 370130 1.07664e+08 9.00032e+06 25324 5.30279e+07 0 0.217249 0.991215 0.743278 1.06719e+08 0.00329444 2.35966e+07 1.01482e+07 2.3589e+07 263 2.36308e+07 1.6972e+07 0.00295021 2.37703e+07 50.1471 0.00343781 0.993339 0 49.9919 GTEX-Y8DK-0526-SM-4TT3R 0 B1 2 pieces 2 x 2 and 3 x 2 mm. Well trimmed. No lesions. 8 Blood Vessel Artery - Tibial 0007610 1112 573 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991926 688427 0.970667 0.993426 0.829292 23377 1 76 0.00233344 382 0 1.30487e+08 0.0288991 515308 1.31351e+08 1.02913e+07 23405 6.48738e+07 0 0.141375 0.993426 0.82384 1.30487e+08 0.00284911 2.78675e+07 1.33289e+07 2.79604e+07 360 2.79085e+07 2.54862e+07 0.00259089 2.81093e+07 50.1793 0.00392314 0.994926 0 50.0832 GTEX-Y8DK-0726-SM-4TT3S 2 B1 2 pieces 6 x 4 and 5 x 4 mm. 6.6 Brain Brain - Cerebellum 0002037 1277 410 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989763 804548 0.937038 0.991553 0.704018 24694 1 76 0.00269608 202 0 9.49321e+07 0.0626153 1.71312e+06 9.57408e+07 7.73335e+06 24736 4.71739e+07 0 0.23302 0.991553 0.698071 9.49321e+07 0.00326349 2.03528e+07 2.59365e+07 2.0451e+07 239 2.04925e+07 1.10517e+07 0.00297927 2.04774e+07 49.9816 0.0178933 0.993343 0 50.1203 GTEX-Y8DK-0826-SM-4TT3T 2 B1 2 pieces 5 x 2 mm and the second is composed of multiple fragments estimated to 5 x 5 mm in aggregate dimension. 7.1 Brain Brain - Cortex 0001870 1285 403 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.990584 825553 0.961265 0.992697 0.849112 23695 1 76 0.00251154 370 0 9.72583e+07 0.0383921 4.5909e+06 9.79738e+07 8.25041e+06 23714 4.83465e+07 0 0.112153 0.992697 0.842911 9.72583e+07 0.00326209 2.12729e+07 2.45025e+07 2.14734e+07 371 2.13412e+07 1.08837e+07 0.00288602 2.16089e+07 50.3116 0.0468584 0.99481 0 50.2345 GTEX-Y8E4-0001-SM-4YUWB C1 Blood Whole Blood 0013756 240 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y8E4-0001-SM-53IV3 C1 Blood Whole Blood 0013756 240 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Y8E4-0001-SM-6UH33 C1 Blood Whole Blood 0013756 240 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y8E4-0003-SM-4V6FY C1 9.8 Blood Cells - EBV-transformed lymphocytes EFO_0000572 240 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992811 989951 0.964634 0.993912 0.790253 22201 1 76 0.00249064 214 0 9.69418e+07 0.034825 769392 9.75357e+07 6.67987e+06 22247 4.82595e+07 0 0.174381 0.993912 0.785442 9.69418e+07 0.00287795 2.15236e+07 1.69975e+07 2.15871e+07 206 2.16352e+07 2.1487e+07 0.00268408 2.15804e+07 49.9366 0.00788831 0.995012 0 50.0737 GTEX-Y8E4-0006-SM-4V6EW C1 8.3 Blood Whole Blood 0013756 240 BP-33855 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.988759 1.46316e+06 0.937419 0.990339 0.757627 21095 1 76 0.00284989 145 0 9.11791e+07 0.0619326 255867 9.20686e+07 6.80939e+06 21118 4.53169e+07 0 0.179792 0.990339 0.750308 9.11791e+07 0.00367917 1.96953e+07 7.75755e+07 1.99594e+07 163 1.99869e+07 1.82165e+07 0.00326387 1.98685e+07 49.8515 0.00277909 0.991918 0 50.333 GTEX-Y8E4-0008-SM-4V6FW C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 377 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.994251 810833 0.970634 0.995221 0.855508 21845 1 76 0.00193097 290 0 1.16864e+08 0.0289982 580316 1.17425e+08 7.91305e+06 21864 5.82336e+07 0 0.115127 0.995221 0.851419 1.16864e+08 0.00227881 2.58686e+07 2.36119e+07 2.58687e+07 323 2.588e+07 2.86576e+07 0.00210472 2.59915e+07 50.1075 0.004942 0.99619 0 50.0001 GTEX-Y8E4-0126-SM-4VBQ2 1 C1 2 pieces, 9x7 & 10x6mm; some multinodular change. 6.4 Thyroid Thyroid 0002046 357 644 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.98551 240962 0.9574 0.989625 0.741255 25803 1 76 0.00315743 205 0 9.56662e+07 0.0423464 1.01362e+06 9.66692e+07 9.63398e+06 25861 4.747e+07 0 0.216145 0.989625 0.733564 9.56662e+07 0.00519065 2.07906e+07 9.39638e+06 2.07457e+07 225 2.08297e+07 1.27054e+07 0.00416981 2.10814e+07 50.3003 0.0104854 0.993739 0 49.946 GTEX-Y8E4-0226-SM-4VBQ3 1 C1 2 pieces, 3x2 & 3x3mm; some attached muscle, nerve, and fat (up to 0.7mm). 6.8 Blood Vessel Artery - Coronary 0001621 365 637 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.983205 268849 0.97422 0.988698 0.842734 23555 1 76 0.0030448 207 0 9.08504e+07 0.025429 712933 9.18889e+07 1.00094e+07 23573 4.50111e+07 0 0.131486 0.988698 0.833209 9.08504e+07 0.00574274 1.95725e+07 8.33666e+06 1.96567e+07 218 1.97415e+07 1.68478e+07 0.00438628 1.99636e+07 50.2798 0.00775864 0.994191 0 50.1072 GTEX-Y8E4-0326-SM-4VBRR 1 C1 2 pieces, 8x7.5 & 7x7mm; mild hypertrophy. 7.6 Heart Heart - Left Ventricle 0006566 369 634 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.989364 235172 0.981932 0.992588 0.845344 21680 1 76 0.00277809 369 0 1.03896e+08 0.0178918 2.97864e+06 1.04672e+08 1.01683e+07 21703 5.16871e+07 0 0.136588 0.992588 0.839079 1.03896e+08 0.00443888 2.28079e+07 2.42401e+07 2.31246e+07 334 2.30711e+07 1.34253e+07 0.00360579 2.316e+07 50.0962 0.0284569 0.995812 0 50.3447 GTEX-Y8E4-0426-SM-4V6GB 1 C1 2 pieces, 11x9 & 8x6mm. 8.5 Heart Heart - Atrial Appendage 0006631 371 633 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.994415 294306 0.975668 0.995239 0.82846 24003 1 76 0.0020773 372 0 1.0732e+08 0.0240341 2.49742e+06 1.07834e+08 7.65238e+06 24035 5.34755e+07 0 0.147208 0.995239 0.824516 1.0732e+08 0.00236266 2.3193e+07 1.60599e+07 2.36639e+07 336 2.35332e+07 1.65844e+07 0.00221986 2.34113e+07 49.8701 0.0231599 0.996063 0 50.5024 GTEX-Y8E4-0526-SM-4V6GC 1 C1 2 pieces, 9x9 & 10x7.5mm; some emphysema and hemosiderin-laden macrophages. 7.1 Lung Lung 0008952 373 632 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.99219 379137 0.970546 0.9931 0.779837 25907 1 76 0.00250222 374 0 1.04754e+08 0.029131 548903 1.05481e+08 8.07904e+06 25954 5.21119e+07 0 0.190709 0.9931 0.774456 1.04754e+08 0.00297215 2.31679e+07 1.04608e+07 2.33137e+07 332 2.32724e+07 1.61022e+07 0.00273697 2.33042e+07 50.0341 0.00520379 0.994011 0 50.1568 GTEX-Y8E4-0626-SM-4WWDL 1 C1 1 piece 9x3 mm, well trimmed of adipose 8 Skin Skin - Sun Exposed (Lower leg) 0004264 376 629 BP-41604 RNA Extraction from Paxgene-derived Lysate Plate Based 07/31/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987672 326440 0.97294 0.990494 0.826362 24452 1 76 0.00262772 315 0 9.40087e+07 0.0267587 610815 9.49109e+07 1.26441e+07 24478 4.67302e+07 0 0.146578 0.990494 0.818507 9.40087e+07 0.00408422 2.03784e+07 1.21531e+07 2.03877e+07 269 2.04283e+07 1.74797e+07 0.00335389 2.05953e+07 50.2035 0.00643567 0.993317 0 50.0115 GTEX-Y8E4-0726-SM-4WWFN 1 C1 2 pieces, 12x9 & 10x8mm;scant fibrous stroma. 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 379 627 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988352 297419 0.975942 0.991215 0.807894 23020 1 76 0.00262359 164 0 7.39646e+07 0.0236948 284174 7.46202e+07 9.58793e+06 23041 3.67547e+07 0 0.168048 0.991215 0.800797 7.39646e+07 0.00398822 1.63152e+07 7.29008e+06 1.63196e+07 169 1.63636e+07 1.34288e+07 0.00330393 1.64792e+07 50.176 0.00380827 0.994078 0 50.0068 GTEX-Y8E4-0826-SM-4VBRS 1 C1 2 pieces, 6x4 & 5x4mm; small amount of attached adipose tissue. 7.6 Nerve Nerve - Tibial 0001323 381 625 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.981812 333530 0.963503 0.987429 0.728478 25547 1 76 0.00320322 199 0 9.41928e+07 0.0362654 591830 9.53919e+07 9.62786e+06 25595 4.66658e+07 0 0.235025 0.987429 0.71932 9.41928e+07 0.00586355 2.05624e+07 9.70765e+06 2.06391e+07 212 2.07769e+07 1.24169e+07 0.00452582 2.09381e+07 50.1932 0.00620419 0.993046 0 50.0931 GTEX-Y8E4-1026-SM-4VBQ5 1 C1 2 pieces, 11x7.5 & 9x8mm; small amount of internal adipose tissue. 8.3 Muscle Muscle - Skeletal 0011907 384 623 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.990059 329463 0.984611 0.993257 0.87372 21202 1 76 0.00271425 378 0 1.21372e+08 0.0151722 2.02287e+06 1.22196e+08 1.20091e+07 21214 6.03681e+07 0 0.110891 0.993257 0.867828 1.21372e+08 0.0043658 2.63753e+07 1.83056e+07 2.65344e+07 345 2.6572e+07 2.38203e+07 0.00353736 2.67136e+07 50.1329 0.0165543 0.996456 0 50.1504 GTEX-Y8E4-1126-SM-5IFIA 1 C1 6 pieces, up to 8x3mm; well trimmed. 7.3 Blood Vessel Artery - Aorta 0001496 401 607 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989589 265584 0.970671 0.991633 0.820012 22973 1 76 0.00308849 156 0 7.38585e+07 0.0289373 269093 7.44817e+07 5.19478e+06 22993 3.67344e+07 0 0.150659 0.991633 0.813151 7.38585e+07 0.00402408 1.58825e+07 9.10446e+06 1.60333e+07 169 1.60223e+07 1.32588e+07 0.00355532 1.60435e+07 50.0331 0.00361287 0.993677 0 50.2363 GTEX-Y8E4-1226-SM-5IFIM 1 C1 2 pieces, 8x8 & 8x8mm; intact sections. 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 403 606 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989728 191202 0.971335 0.991692 0.80021 23853 1 76 0.00307388 159 0 7.33667e+07 0.0284059 1.04858e+06 7.39813e+07 5.45405e+06 23876 3.65082e+07 0 0.171125 0.991692 0.793562 7.33667e+07 0.00399128 1.61118e+07 8.31066e+06 1.62258e+07 180 1.61684e+07 1.06838e+07 0.00353167 1.6304e+07 50.2087 0.0141735 0.993657 0 50.1762 GTEX-Y8E4-1326-SM-5IFIY 1 C1 2 pieces, 9x8.5 & 9x8mm. 7.3 Pancreas Pancreas 0001150 405 604 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991415 210335 0.979257 0.993098 0.858885 21557 1 76 0.00307679 101 0 8.35152e+07 0.0203464 166906 8.40956e+07 6.22115e+06 21576 4.15878e+07 0 0.120372 0.993098 0.852957 8.35152e+07 0.00378186 1.90896e+07 2.61687e+07 1.94645e+07 123 1.93297e+07 2.61161e+07 0.00342873 1.93623e+07 50.042 0.00198472 0.994781 0 50.4861 GTEX-Y8E4-1526-SM-4WWDI 1 C1 1 piece 9x4 mm. full oxyntic mucosa with mild surface desquamation. 6.4 Stomach Stomach 0000945 411 601 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.985498 337186 0.974187 0.988722 0.823093 24589 1 76 0.00262411 326 0 9.39896e+07 0.0255421 1.43603e+06 9.50617e+07 1.32321e+07 24618 4.6694e+07 0 0.151094 0.988722 0.81381 9.39896e+07 0.00422024 2.09094e+07 5.18212e+07 2.12402e+07 295 2.1226e+07 1.75334e+07 0.00341958 2.12097e+07 49.9809 0.0151063 0.991946 0 50.3925 GTEX-Y8E4-1626-SM-5S2MW 1 C1 2 pieces, 9x8 & 8x8mm; adipose and fibrous tissue only. 7.2 Breast Breast - Mammary Tissue 0008367 415 597 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992561 219454 0.977658 0.994138 0.860645 21147 1 76 0.00175014 146 0 6.06342e+07 0.0220503 563745 6.09918e+07 4.0451e+06 21155 3.01635e+07 0 0.117012 0.994138 0.8556 6.06342e+07 0.00269684 1.32492e+07 6.22883e+06 1.33642e+07 163 1.32514e+07 1.07592e+07 0.00222274 1.34594e+07 50.3894 0.00924296 0.995714 0 50.216 GTEX-Y8E4-1726-SM-5LU9G 1 C1 1 piece, 6x2 mm. similar to 1725, less inflammation, less desquamation (less handling). Well trimmed. 8.8 Esophagus Esophagus - Mucosa 0006920 416 598 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991859 266667 0.972566 0.993711 0.811393 22175 1 76 0.00444866 134 0 6.69908e+07 0.0271954 316891 6.74148e+07 6.00929e+06 22191 3.33309e+07 0 0.161172 0.993711 0.806291 6.69908e+07 0.00360241 1.49858e+07 9.24545e+06 1.50185e+07 145 1.50057e+07 1.2631e+07 0.00402632 1.51214e+07 50.192 0.00470062 0.995564 0 50.0546 GTEX-Y8E4-1826-SM-4VBPV 1 C1 6 pieces, up to 9x5mm; well dissected. 8.3 Esophagus Esophagus - Muscularis 0004648 417 598 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.981823 389253 0.975375 0.987772 0.851855 23055 1 76 0.0029579 206 0 8.9326e+07 0.0243519 611361 9.04318e+07 9.44486e+06 23079 4.42422e+07 0 0.12352 0.987772 0.841438 8.9326e+07 0.00574417 1.92357e+07 7.64361e+06 1.93498e+07 225 1.94532e+07 1.5788e+07 0.00434264 1.96364e+07 50.2343 0.00676046 0.993721 0 50.1479 GTEX-Y8E4-1926-SM-4VBPW 1 C1 6 pieces, up to 10x5mm; one with small portion of squamous mucosa and mild chronic inflammation 8.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 419 597 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.986298 308349 0.974894 0.990416 0.836773 23374 1 76 0.00297698 375 0 1.12354e+08 0.0248647 964068 1.13441e+08 1.08245e+07 23401 5.5803e+07 0 0.138121 0.990416 0.828753 1.12354e+08 0.0051206 2.41604e+07 9.88264e+06 2.43044e+07 353 2.4363e+07 1.83071e+07 0.00404434 2.45398e+07 50.1808 0.00849838 0.994533 0 50.1486 GTEX-Y8E4-2026-SM-5IFJB 1 C1 6 pieces, up to 8x3.5mm; not well trimmed, 10-20% adipose tissue in aggregate. 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 424 592 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988543 210064 0.971651 0.990725 0.813002 23793 1 76 0.00316875 182 0 7.4804e+07 0.0280532 688398 7.55044e+07 5.54035e+06 23817 3.72122e+07 0 0.158649 0.990725 0.805461 7.4804e+07 0.00412612 1.63943e+07 8.60136e+06 1.64894e+07 176 1.64708e+07 1.25915e+07 0.00364638 1.6571e+07 50.1517 0.00911733 0.992906 0 50.1446 GTEX-Y8E4-2126-SM-5RQHO 1 C1 2 pieces, 10x8 & 8.5x8mm; good glandular component. 6.4 Prostate Prostate 0002367 425 592 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991369 207023 0.962348 0.99224 0.736368 24685 1 76 0.00221562 128 0 6.31075e+07 0.0374593 342007 6.3601e+07 3.16019e+06 24722 3.14068e+07 0 0.225981 0.99224 0.730654 6.31075e+07 0.0030811 1.39415e+07 5.93772e+06 1.39964e+07 149 1.39687e+07 8.35738e+06 0.00264798 1.40256e+07 50.1016 0.00537738 0.993111 0 50.0982 GTEX-Y8E4-2226-SM-5LU94 1 C1 2 pieces, 14x7 & 8x8mm; spermatogenesis. 5.7 Testis Testis 0000473 427 590 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990316 384575 0.941627 0.992338 0.770876 31113 1 76 0.00445552 134 0 6.77949e+07 0.058124 1.06145e+06 6.83183e+07 6.06549e+06 31159 3.3725e+07 0 0.170751 0.992338 0.76497 6.77949e+07 0.00355288 1.43545e+07 1.24086e+07 1.4419e+07 146 1.44393e+07 1.00164e+07 0.00400512 1.44684e+07 50.0503 0.0155368 0.99436 0 50.1121 GTEX-Y8E4-2326-SM-EAZAZ 1 C1 6 pieces, up to 8.4x3mm. All specimens have mucosa as well as the targeted muscularis propria. Mucosa=2, muscle=1. 5.5 Colon Colon - Sigmoid 0001159 434 584 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-10518 05/03/2017 TruSeq.v1 RNASEQ 0.985062 199964 0.972273 0.986121 0.790091 24674 1 76 0.00211763 269 0 8.73509e+07 0.0273907 1.42091e+06 8.85803e+07 6.96413e+06 24716 4.35167e+07 0 0.182182 0.986121 0.779125 8.73509e+07 0.00319084 1.93122e+07 1.10491e+07 1.96174e+07 313 1.94947e+07 9.52535e+06 0.00265366 1.95145e+07 50.0254 0.0160409 0.987179 0 50.392 GTEX-Y8E4-2426-SM-4WWDN 2 C1 1 piece, 9x3mm; well trimmed 7.6 Colon Colon - Transverse 0001157 437 582 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988673 270024 0.974129 0.991542 0.80653 24682 1 76 0.00270045 214 0 8.54763e+07 0.0250678 1.0373e+06 8.62054e+07 1.10316e+07 24708 4.24627e+07 0 0.167599 0.991542 0.799708 8.54763e+07 0.00418339 1.89195e+07 1.09163e+07 1.87926e+07 253 1.881e+07 1.33574e+07 0.00343977 1.91341e+07 50.4271 0.0120329 0.994411 0 49.8318 GTEX-Y8E5-0001-SM-4YUWN B1 Blood Whole Blood 0013756 -118 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y8E5-0001-SM-53IVA B1 Blood Whole Blood 0013756 -118 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Y8E5-0001-SM-DLIPY B1 Blood Whole Blood 0013756 -118 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-Y8E5-0002-SM-57WD9 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -118 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989625 667138 0.959971 0.991998 0.790809 22186 1 76 0.0021882 215 0 9.21251e+07 0.0395267 511353 9.28683e+07 1.19572e+07 22215 4.58379e+07 0 0.169162 0.991998 0.784481 9.21251e+07 0.00368804 2.02248e+07 2.20391e+07 2.04455e+07 206 2.05212e+07 2.01954e+07 0.00293633 2.03568e+07 49.7989 0.00550622 0.99437 0 50.2713 GTEX-Y8E5-0006-SM-47JWQ B1 8.7 Blood Whole Blood 0013756 -118 BP-33855 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2012 LCSET-2974 04/11/2013 TruSeq.v1 RNASEQ 0.956913 413317 0.980275 0.960336 0.817428 17454 1 76 0.00275805 88 0 7.98413e+07 0.017706 75690 8.31389e+07 8.28207e+06 17458 3.95916e+07 0 0.162847 0.960336 0.785006 7.98413e+07 0.00391278 1.89963e+07 1.33552e+08 1.89111e+07 120 1.89986e+07 2.28548e+07 0.00333336 1.92233e+07 50.2939 0.000910405 0.96376 0 49.8876 GTEX-Y8E5-0008-SM-57WBA B1 9.3 Skin Cells - Cultured fibroblasts EFO_0002009 53 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990716 598853 0.977634 0.993327 0.867623 20288 1 76 0.0017795 186 0 8.61664e+07 0.0220068 321503 8.67453e+07 1.1265e+07 20301 4.28835e+07 0 0.11001 0.993327 0.861833 8.61664e+07 0.00351403 1.92863e+07 1.45433e+07 1.94006e+07 194 1.94723e+07 2.25815e+07 0.00264448 1.94353e+07 49.9525 0.00370629 0.995937 0 50.1478 GTEX-Y8E5-0226-SM-57WCM 0 B1 2 pieces, 9x8 & 10x10mm; dense pink fidbrosu tissue is ~50% of both sections, delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 60 391 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990076 323301 0.970938 0.992902 0.81834 24450 1 76 0.00216812 275 0 9.30463e+07 0.028828 658184 9.37115e+07 1.24664e+07 24479 4.62836e+07 0 0.152598 0.992902 0.812532 9.30463e+07 0.00377035 2.02867e+07 1.05285e+07 2.04625e+07 282 2.04285e+07 1.48801e+07 0.00296695 2.05675e+07 50.1694 0.00702351 0.995728 0 50.2157 GTEX-Y8E5-0326-SM-57WBM 0 B1 2 pieces, 10x7 & 12x8mm; muscle fibers atrophied, interstitial fibrosis 7.4 Muscle Muscle - Skeletal 0011907 90 361 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.992298 251032 0.980903 0.994358 0.878551 21439 1 76 0.00201969 211 0 9.01345e+07 0.0188506 1.20812e+06 9.0646e+07 1.11202e+07 21447 4.48862e+07 0 0.102352 0.994358 0.873594 9.01345e+07 0.00364377 1.93185e+07 1.01712e+07 1.94683e+07 233 1.94129e+07 2.02243e+07 0.00283005 1.95363e+07 50.1584 0.0133279 0.996417 0 50.1932 GTEX-Y8E5-0526-SM-57WBY 0 B1 2 pieces, 5.5x5 & 5x5mm; 1.4mm adherent nubbin of fat on one section 7.4 Nerve Nerve - Tibial 0001323 86 365 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990636 366719 0.970845 0.992844 0.807172 24810 1 76 0.00210987 290 0 9.50987e+07 0.0288249 367393 9.57841e+07 1.17274e+07 24843 4.73325e+07 0 0.163672 0.992844 0.801397 9.50987e+07 0.00374532 2.08653e+07 9.0652e+06 2.09978e+07 270 2.09948e+07 1.70236e+07 0.00292577 2.10656e+07 50.0842 0.00383564 0.995052 0 50.1582 GTEX-Y8LW-0002-SM-4V6G2 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -69 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992431 653758 0.966687 0.993368 0.79279 20881 1 76 0.00257817 166 0 8.39669e+07 0.0325354 622936 8.45274e+07 5.85095e+06 20915 4.17905e+07 0 0.173897 0.993368 0.787532 8.39669e+07 0.00293616 1.86919e+07 1.51667e+07 1.87256e+07 166 1.87903e+07 1.88632e+07 0.002757 1.87123e+07 49.8959 0.00736963 0.994305 0 50.045 GTEX-Y8LW-0004-SM-4YUUY B1 Blood Whole Blood 0013756 -69 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y8LW-0004-SM-53IVS B1 Blood Whole Blood 0013756 -69 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Y8LW-0004-SM-6UH3N B1 Blood Whole Blood 0013756 -69 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y8LW-0005-SM-4V6EV B1 8.8 Blood Whole Blood 0013756 -69 BP-33855 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2012 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991355 1.30342e+06 0.947618 0.992386 0.776205 19346 1 76 0.00278551 192 0 1.00468e+08 0.0517844 310904 1.01239e+08 6.82696e+06 19361 5.0028e+07 0 0.171412 0.992386 0.770296 1.00468e+08 0.00329671 2.15971e+07 6.49682e+07 2.19648e+07 203 2.19925e+07 1.96719e+07 0.00304084 2.1699e+07 49.6641 0.003071 0.993418 0 50.4221 GTEX-Y8LW-0008-SM-4V6G5 B1 9 Skin Cells - Cultured fibroblasts EFO_0002009 342 BP-34920 RNA isolation_Trizol Manual (Cell Pellet) 01/08/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.994343 660375 0.96717 0.995255 0.834074 22189 1 76 0.00207625 294 0 1.05511e+08 0.0324548 339935 1.06014e+08 7.5568e+06 22215 5.25874e+07 0 0.133096 0.995255 0.830116 1.05511e+08 0.00238671 2.33413e+07 2.13284e+07 2.34526e+07 278 2.34937e+07 2.29634e+07 0.00223134 2.34041e+07 49.9045 0.0032065 0.996167 0 50.1189 GTEX-Y8LW-0126-SM-4VBS1 2 B1 2 pieces, 11x11 & 11x11mm; mild congrestion 7.2 Spleen Spleen 0002106 207 1153 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.980905 309961 0.962252 0.985498 0.756534 24647 1 76 0.00458714 159 0 8.93611e+07 0.0336822 511960 9.06761e+07 9.39891e+06 24682 4.4128e+07 0 0.205718 0.985498 0.745563 8.93611e+07 0.00680768 1.97232e+07 1.80003e+07 1.96976e+07 184 1.98805e+07 1.27095e+07 0.00569223 1.99436e+07 50.0793 0.00564603 0.990092 0 49.9676 GTEX-Y8LW-0326-SM-4VBQ9 1 B1 2 pieces, 9x6 & 7x6.5mm; patchy chronic and active pneumonitis 7.5 Lung Lung 0008952 215 1146 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.983226 281030 0.972537 0.988758 0.809804 23731 1 76 0.00340047 157 0 7.77455e+07 0.0270793 484976 7.86294e+07 7.6656e+06 23759 3.85263e+07 0 0.162732 0.988758 0.8007 7.77455e+07 0.00598507 1.71382e+07 7.08345e+06 1.72277e+07 181 1.733e+07 1.21815e+07 0.00468554 1.74586e+07 50.1848 0.00616787 0.99429 0 50.1302 GTEX-Y8LW-0426-SM-4VBQ6 1 B1 6 pieces, up to 9x3mm; adherent adventia up to ~1mm along edges of most sections 7.9 Blood Vessel Artery - Aorta 0001496 221 1140 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.987091 290196 0.975888 0.990971 0.837059 23133 1 76 0.00298145 277 0 1.07813e+08 0.0237463 324451 1.08796e+08 1.02519e+07 23159 5.35377e+07 0 0.138829 0.990971 0.829501 1.07813e+08 0.00500643 2.33921e+07 8.56937e+06 2.33426e+07 300 2.34499e+07 2.09413e+07 0.00398997 2.36883e+07 50.2529 0.00298221 0.99485 0 49.9471 GTEX-Y8LW-0526-SM-4VDS7 1 B1 6 pieces, up to 11x6mm; all muscularis, nubbins of attached serosal fibrous tissue up to ~3mm, rep ones delineated 7.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 236 1126 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990526 338483 0.970135 0.992036 0.86328 22084 1 76 0.00244192 372 0 9.83874e+07 0.0296897 1.87149e+06 9.91773e+07 6.90374e+06 22098 4.89147e+07 0 0.106855 0.992036 0.856405 9.83874e+07 0.00368807 2.10872e+07 1.42957e+07 2.12911e+07 369 2.11375e+07 1.3618e+07 0.00306405 2.13844e+07 50.2903 0.0188701 0.993546 0 50.2406 GTEX-Y8LW-0626-SM-4VDS8 1 B1 6 pieces, up to 9x4.5mm; all muscularis, good specimens 8.4 Esophagus Esophagus - Muscularis 0004648 231 1131 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991844 514722 0.97063 0.993327 0.860777 21860 1 76 0.00242064 373 0 9.2576e+07 0.0292155 1.00736e+06 9.31979e+07 6.05332e+06 21874 4.60621e+07 0 0.109852 0.993327 0.855033 9.2576e+07 0.00352057 1.97689e+07 1.34253e+07 2.02152e+07 331 2.00547e+07 1.35722e+07 0.00296979 2.00621e+07 50.0093 0.0108088 0.99481 0 50.5581 GTEX-Y8LW-0726-SM-5IFI1 1 B1 1 piece, 3x1.5mm; squamous mucosa is ~30% thickness 8.9 Esophagus Esophagus - Mucosa 0006920 227 1136 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.99095 166784 0.976248 0.99249 0.813107 22832 1 76 0.00323806 173 0 8.16283e+07 0.02339 408907 8.22459e+07 6.02526e+06 22848 4.0654e+07 0 0.163141 0.99249 0.807001 8.16283e+07 0.00379037 1.83709e+07 1.03571e+07 1.84743e+07 181 1.84771e+07 1.60063e+07 0.00351378 1.84878e+07 50.0144 0.00497176 0.99403 0 50.1403 GTEX-Y8LW-0826-SM-4WWDO 1 B1 1 piece, 7x5mm; mucoa well - preserved, up to 1mm thick 6 Stomach Stomach 0000945 250 1113 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986473 359412 0.968927 0.98972 0.815844 23577 1 76 0.00284275 261 0 8.37339e+07 0.0307821 1.48535e+06 8.46036e+07 1.02399e+07 23601 4.16071e+07 0 0.153083 0.98972 0.807457 8.37339e+07 0.00494671 1.8852e+07 5.12928e+07 1.89145e+07 224 1.8891e+07 1.53467e+07 0.00389128 1.91346e+07 50.3202 0.0175566 0.992966 0 50.0827 GTEX-Y8LW-0926-SM-4VBQ8 1 B1 2 pieces, 11x7 & 11x5mm; ~<5% fibrous areas, delineated 7.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 239 1125 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.985842 309306 0.978189 0.990724 0.82693 23466 1 76 0.00304934 275 0 1.03659e+08 0.0215469 627436 1.04629e+08 1.04955e+07 23498 5.14436e+07 0 0.151259 0.990724 0.819259 1.03659e+08 0.00548901 2.29185e+07 9.49666e+06 2.30584e+07 296 2.31738e+07 1.66112e+07 0.00426317 2.32922e+07 50.1274 0.00599675 0.995606 0 50.1522 GTEX-Y8LW-1026-SM-5IFJY 1 B1 2 pieces, 10x9 & 11x10mm; islets reasonably well-preserved, rep ones delineated 7.5 Pancreas Pancreas 0001150 245 1119 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989455 208340 0.97209 0.991283 0.829348 22215 1 76 0.00315229 129 0 8.21583e+07 0.0276624 251364 8.28808e+07 6.41956e+06 22242 4.09085e+07 0 0.142742 0.991283 0.822119 8.21583e+07 0.00381589 1.86293e+07 1.63379e+07 1.88841e+07 141 1.88539e+07 2.11869e+07 0.00348348 1.88084e+07 49.9396 0.00303284 0.993112 0 50.3396 GTEX-Y8LW-1126-SM-4VDS4 1 B1 6 pieces, up to 9x4.5mm; 7 Colon Colon - Sigmoid 0001159 256 1109 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990723 449040 0.966716 0.992096 0.827947 24539 1 76 0.00266185 371 0 9.93957e+07 0.0331049 1.46761e+06 1.00188e+08 6.88597e+06 24576 4.94148e+07 0 0.138768 0.992096 0.821403 9.93957e+07 0.00382161 2.14576e+07 1.50956e+07 2.20858e+07 357 2.1924e+07 1.17637e+07 0.00324093 2.17424e+07 49.7921 0.0146486 0.993469 0 50.7214 GTEX-Y8LW-1226-SM-4WWDP 1 B1 1 piece, 7x2mm; all muscularis; no mucosa 8.2 Colon Colon - Transverse 0001157 261 1104 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984919 281220 0.976628 0.988132 0.848513 23889 1 76 0.00265235 279 0 9.91538e+07 0.0230626 983754 1.00345e+08 1.37808e+07 23914 4.92769e+07 0 0.128114 0.988132 0.838443 9.91538e+07 0.00423306 2.15792e+07 1.03217e+07 2.16134e+07 284 2.16341e+07 1.86242e+07 0.00344014 2.18612e+07 50.261 0.00980375 0.991344 0 50.0396 GTEX-Y8LW-1426-SM-5RQJJ 1 B1 6 pieces, up to 10x5mm; 3 show squamous mucosa up to ~100 microns, 3 are all stroma 7.5 Vagina Vagina 0000996 265 1101 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990512 165832 0.972777 0.991901 0.791646 23423 1 76 0.00225112 153 0 6.45618e+07 0.0270358 406096 6.50889e+07 3.1752e+06 23446 3.21377e+07 0 0.18113 0.991901 0.785235 6.45618e+07 0.00310647 1.42057e+07 6.99203e+06 1.43502e+07 154 1.43146e+07 1.03401e+07 0.0026782 1.43307e+07 50.0281 0.0062391 0.993291 0 50.253 GTEX-Y8LW-1526-SM-5IFHL 0 B1 6 pieces, up to 8x2.5mm; 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 275 1091 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.987634 256188 0.969404 0.989757 0.782354 23962 1 76 0.00327876 183 0 7.86739e+07 0.030399 741880 7.94881e+07 6.01251e+06 23986 3.91277e+07 0 0.187051 0.989757 0.77434 7.86739e+07 0.00436622 1.72953e+07 9.93138e+06 1.74074e+07 186 1.73768e+07 1.1592e+07 0.00382133 1.7492e+07 50.1651 0.00933322 0.99188 0 50.1615 GTEX-Y8LW-1626-SM-5IFHX 1 B1 2 pieces, 18x11 & 14x10mm; ~20% with gynecomastoid ductal/stromal hyperplasia 7.5 Breast Breast - Mammary Tissue 0008367 280 1087 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988986 204453 0.970772 0.991115 0.766424 24685 1 76 0.0031738 169 0 8.10307e+07 0.028876 282546 8.17571e+07 6.03349e+06 24712 4.03063e+07 0 0.204348 0.991115 0.759614 8.10307e+07 0.00402342 1.78338e+07 7.67192e+06 1.78879e+07 177 1.78882e+07 1.31967e+07 0.0035977 1.80011e+07 50.1573 0.00345592 0.993244 0 50.0758 GTEX-Y8LW-1826-SM-5S2MV 0 B1 1 piece, 11x2mm; squamous epithelium is 1-1.%% thickness 6.3 Skin Skin - Sun Exposed (Lower leg) 0004264 341 1027 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992207 236437 0.970132 0.993526 0.759236 23873 1 76 0.00196975 168 0 7.36962e+07 0.0296647 359219 7.41764e+07 4.97285e+06 23901 3.66756e+07 0 0.210896 0.993526 0.754321 7.36962e+07 0.0028459 1.60923e+07 7.17089e+06 1.62667e+07 176 1.61785e+07 1.07437e+07 0.00240724 1.62756e+07 50.1496 0.00484277 0.994846 0 50.2695 GTEX-Y8LW-1926-SM-4WWFZ 0 B1 2 pieces, 11x10 & 12x8mm; ~10% fibrous tissue, rep. areas delineated 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 343 1025 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.98928 276159 0.974585 0.991323 0.807208 23339 1 76 0.00261343 213 0 8.89473e+07 0.0251667 436037 8.97258e+07 1.10701e+07 23373 4.4234e+07 0 0.167377 0.991323 0.800204 8.89473e+07 0.0039635 1.95827e+07 1.02756e+07 1.96111e+07 237 1.95802e+07 1.4748e+07 0.00328707 1.97963e+07 50.2744 0.00485966 0.993366 0 50.0363 GTEX-Y8LW-2026-SM-4V6G8 0 B1 2 pieces, 10x9 & 9.5x9mm; <5% interstitial fat 8.1 Muscle Muscle - Skeletal 0011907 346 1023 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.994274 321285 0.980519 0.99521 0.850352 20734 1 76 0.00225418 274 0 9.43645e+07 0.0192949 1.13442e+06 9.48187e+07 6.67948e+06 20752 4.70262e+07 0 0.130167 0.99521 0.846279 9.43645e+07 0.00262944 2.06476e+07 1.22445e+07 2.12346e+07 288 2.11296e+07 1.7366e+07 0.00244163 2.0817e+07 49.6274 0.011964 0.996146 0 50.7008 GTEX-Y8LW-2126-SM-4VBRX 0 B1 2 pieces, 5.5x4 & 5x4.5mm; discontinous rim of adherent fat up to ~0.7mm on one 7.4 Nerve Nerve - Tibial 0001323 348 1021 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.983905 355934 0.96558 0.988934 0.722918 25219 1 76 0.00315352 218 0 9.99404e+07 0.0341717 271026 1.01059e+08 1.0238e+07 25274 4.95567e+07 0 0.242662 0.988934 0.714918 9.99404e+07 0.00559052 2.19037e+07 9.26102e+06 2.19801e+07 217 2.21455e+07 1.44955e+07 0.00436582 2.22249e+07 50.0894 0.00268187 0.993963 0 50.087 GTEX-Y9LG-0001-SM-4VBRQ B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -164 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.988976 836218 0.960758 0.99209 0.790563 22143 1 76 0.00303725 178 0 9.33622e+07 0.0388174 799213 9.41066e+07 8.91536e+06 22176 4.64201e+07 0 0.170195 0.99209 0.78431 9.33622e+07 0.0046009 2.05709e+07 1.5437e+07 2.06328e+07 188 2.07517e+07 2.04166e+07 0.00381662 2.07341e+07 49.9788 0.00849264 0.995205 0 50.0752 GTEX-Y9LG-0003-SM-4YUVB B1 Blood Whole Blood 0013756 -164 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Y9LG-0003-SM-53IUW B1 Blood Whole Blood 0013756 -164 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Y9LG-0003-SM-6UH3O B1 Blood Whole Blood 0013756 -164 BP-33861 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/04/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Y9LG-0006-SM-4VBRK B1 7.6 Blood Whole Blood 0013756 -164 BP-33855 RNA isolation_PAXgene Blood RNA (Manual) 12/04/2012 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.981465 943155 0.960134 0.986543 0.804184 19818 1 76 0.00347021 205 0 1.14582e+08 0.0391628 637846 1.16145e+08 1.17058e+07 19833 5.68128e+07 0 0.15595 0.986543 0.793363 1.14582e+08 0.00632103 2.52583e+07 8.6986e+07 2.54419e+07 218 2.56318e+07 2.38834e+07 0.00488828 2.56534e+07 50.021 0.0054918 0.991622 0 50.181 GTEX-Y9LG-0008-SM-4VBRJ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 159 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.99092 679088 0.977191 0.993724 0.876655 22390 1 76 0.0027999 385 0 1.44979e+08 0.022543 1.07839e+06 1.45894e+08 1.4297e+07 22406 7.21539e+07 0 0.100535 0.993724 0.871153 1.44979e+08 0.00429697 3.22597e+07 2.35398e+07 3.2372e+07 354 3.23981e+07 3.51916e+07 0.00354632 3.26571e+07 50.199 0.00739157 0.996528 0 50.0869 GTEX-Y9LG-0126-SM-5Q59W 1 B1 2 pieces. 13x10 & 10x6.5mm; 1 with cortex and medulla & 10% adipose. other with 30% internal adipose 7.3 Adrenal Gland Adrenal Gland 0002369 72 979 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991653 303577 0.964058 0.993707 0.855797 21545 1 76 0.00181377 153 0 6.82869e+07 0.0354598 923451 6.87194e+07 4.95376e+06 21557 3.39583e+07 0 0.108261 0.993707 0.850412 6.82869e+07 0.003079 1.49715e+07 1.97069e+07 1.51151e+07 178 1.50623e+07 1.18448e+07 0.00244507 1.51601e+07 50.1617 0.013438 0.995761 0 50.2387 GTEX-Y9LG-0226-SM-4VBS4 0 B1 6 pieces. up to 11x2mm; Well trimmed. Only 1 small plaque. 7.5 Blood Vessel Artery - Aorta 0001496 77 974 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.983558 295425 0.975291 0.988904 0.834737 22473 1 76 0.00300513 162 0 7.803e+07 0.0243818 269727 7.89055e+07 8.06941e+06 22493 3.86809e+07 0 0.140554 0.988904 0.825475 7.803e+07 0.00558268 1.68945e+07 6.37122e+06 1.69066e+07 177 1.70146e+07 1.44522e+07 0.00428694 1.71905e+07 50.2571 0.00341835 0.99425 0 50.0178 GTEX-Y9LG-0426-SM-4VBRT 0 B1 2 pieces. 16x6 & 12x12mm; 7.7 Thyroid Thyroid 0002046 81 970 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.985461 313708 0.966986 0.990235 0.765134 24823 1 76 0.00305845 208 0 9.74608e+07 0.0327207 220068 9.84219e+07 9.70115e+06 24869 4.83673e+07 0 0.201852 0.990235 0.757663 9.74608e+07 0.00530107 2.1284e+07 9.39192e+06 2.13361e+07 220 2.14836e+07 1.53187e+07 0.00417435 2.15824e+07 50.1146 0.00223596 0.99501 0 50.0611 GTEX-Y9LG-0526-SM-4VBRY 1 B1 2 pieces. 12x9 & 10x9mm; 8.6 Lung Lung 0008952 86 965 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.989439 361023 0.978333 0.992565 0.824971 24651 1 76 0.00298686 275 0 1.18676e+08 0.0213613 356944 1.19565e+08 1.06e+07 24686 5.90227e+07 0 0.153362 0.992565 0.818838 1.18676e+08 0.00464407 2.63853e+07 1.10136e+07 2.65044e+07 322 2.66159e+07 2.30663e+07 0.00381285 2.66344e+07 50.0174 0.00298535 0.995692 0 50.1126 GTEX-Y9LG-0626-SM-4WWDH 0 B1 1 piece, 10x2.5 mm. Focal surface desquamation. 9.2 Esophagus Esophagus - Mucosa 0006920 100 951 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987933 482781 0.969218 0.990067 0.818474 22203 1 76 0.00273195 276 0 9.29172e+07 0.0304086 472555 9.38494e+07 1.16639e+07 22218 4.62273e+07 0 0.150744 0.990067 0.810344 9.29172e+07 0.00406946 2.07769e+07 2.1214e+07 2.0844e+07 257 2.08515e+07 1.76741e+07 0.00339926 2.09678e+07 50.1391 0.00503525 0.992201 0 50.0806 GTEX-Y9LG-0726-SM-4VDS3 1 B1 2 pieces, 13.5x10 & 12x10mm; 7.4 Pancreas Pancreas 0001150 89 962 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991864 910292 0.964712 0.99348 0.820812 23818 1 76 0.00243601 209 0 1.11313e+08 0.0350524 391267 1.12044e+08 7.00718e+06 23840 5.53999e+07 0 0.1439 0.99348 0.81546 1.11313e+08 0.00370006 2.46643e+07 3.19319e+07 2.47567e+07 222 2.4959e+07 2.54572e+07 0.00306701 2.46572e+07 49.6959 0.00349209 0.995096 0 50.0935 GTEX-Y9LG-0826-SM-5ZZVG 0 B1 6 pieces, up to 11x5mm; Well trimmed. 6 Esophagus Esophagus - Muscularis 0004648 99 952 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.993661 144717 0.974275 0.995132 0.818606 24079 1 76 0.00203506 155 0 6.74792e+07 0.0255359 537641 6.78094e+07 5.85035e+06 24094 3.36298e+07 0 0.155669 0.995132 0.81462 6.74792e+07 0.00332042 1.45414e+07 6.76808e+06 1.47392e+07 172 1.45983e+07 9.87684e+06 0.00267679 1.47755e+07 50.3016 0.00792871 0.996602 0 50.3378 GTEX-Y9LG-0926-SM-4VDS6 0 B1 6 pieces, up to 15x5.5mm.Well trimmed. 6.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 103 948 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.988629 1.06253e+06 0.9473 0.990501 0.82314 22460 1 76 0.00244709 269 0 8.97879e+07 0.0525224 1.03546e+06 9.06489e+07 5.71802e+06 22477 4.46295e+07 0 0.12416 0.990501 0.815322 8.97879e+07 0.0037115 1.88085e+07 3.14934e+07 1.9352e+07 302 1.91146e+07 1.06404e+07 0.0030781 1.92255e+07 50.1446 0.0114227 0.992373 0 50.7121 GTEX-Y9LG-1026-SM-5IFJN 1 B1 1 piece. 5x3 mm. Mucosa-submucosa only. Basilar gland dilatation. 7 Stomach Stomach 0000945 107 944 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988058 251801 0.970657 0.990306 0.765131 23062 1 76 0.00327869 200 0 6.66224e+07 0.0288386 453987 6.72746e+07 4.78882e+06 23092 3.31243e+07 0 0.205526 0.990306 0.757714 6.66224e+07 0.00426592 1.48839e+07 2.07074e+07 1.50378e+07 166 1.50089e+07 1.03808e+07 0.00377118 1.50587e+07 50.0828 0.00674827 0.992553 0 50.2571 GTEX-Y9LG-1126-SM-4VBQ7 0 B1 6 pieces, up to 12x5mm. Well trimmed except for 1 piece with 0.6mm adipose. 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 94 957 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.981745 312068 0.969806 0.987487 0.795802 23204 1 76 0.00317267 218 0 9.37436e+07 0.0300234 1.00124e+06 9.49314e+07 1.02889e+07 23226 4.64518e+07 0 0.174003 0.987487 0.785845 9.37436e+07 0.0059309 2.05755e+07 1.20963e+07 2.07027e+07 241 2.07749e+07 1.28913e+07 0.00454377 2.1035e+07 50.311 0.010547 0.993229 0 50.1541 GTEX-Y9LG-1226-SM-4VBQA 0 B1 2 pieces. 14.5x14 & 13x11mm. 1 with 0.7mm lymphoid nodule. 1 with 25% fibrous stroma. 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 92 959 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.984704 271113 0.971645 0.989396 0.820864 23915 1 76 0.00304428 274 0 1.01153e+08 0.0281333 933869 1.02237e+08 9.96841e+06 23941 5.02059e+07 0 0.150781 0.989396 0.81216 1.01153e+08 0.00541006 2.20475e+07 1.04431e+07 2.21869e+07 315 2.22541e+07 1.46681e+07 0.00422156 2.24337e+07 50.201 0.00913434 0.994088 0 50.1576 GTEX-Y9LG-1326-SM-4VBQB 0 B1 6 pieces. up to 8x5mm; All muscle (target) with adjacent submucosa. Neural tissue marked. 7.4 Colon Colon - Sigmoid 0001159 112 939 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.985067 401346 0.972828 0.989577 0.810813 24837 1 76 0.00305067 378 0 1.42241e+08 0.026947 856519 1.43739e+08 1.40541e+07 24879 7.05844e+07 0 0.162015 0.989577 0.802362 1.42241e+08 0.00530396 3.09229e+07 1.4115e+07 3.09294e+07 411 3.10348e+07 2.16737e+07 0.00417218 3.1431e+07 50.3171 0.00595886 0.994087 0 50.0053 GTEX-Y9LG-1426-SM-5IFJZ 0 B1 2 pieces. 16.5x10 & 13x9mm. 1 with fibrous and adipose (50:50). Ducts and fibrous tissue in other with changes of gynecomastoid hyperplasia.. 6.8 Breast Breast - Mammary Tissue 0008367 116 935 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.985811 200639 0.975421 0.987604 0.814015 22781 1 76 0.00307922 205 0 8.35966e+07 0.0243442 316844 8.46458e+07 6.13342e+06 22804 4.16135e+07 0 0.161406 0.987604 0.803925 8.35966e+07 0.00380932 1.82654e+07 9.2695e+06 1.84615e+07 211 1.83854e+07 1.36726e+07 0.00344361 1.84866e+07 50.1372 0.00374317 0.989398 0 50.267 GTEX-Y9LG-1526-SM-4WWDR 1 B1 1 piece with small amount (1.6x0.8 mm) muscularis propria. 6.6 Colon Colon - Transverse 0001157 122 929 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986474 311414 0.971197 0.990028 0.812496 23911 1 76 0.00295958 271 0 8.50854e+07 0.0279584 1.31786e+06 8.59424e+07 1.11973e+07 23939 4.22402e+07 0 0.158701 0.990028 0.804394 8.50854e+07 0.00513752 1.88231e+07 1.74553e+07 1.89394e+07 268 1.88891e+07 1.06223e+07 0.00404464 1.91473e+07 50.3395 0.0153343 0.993583 0 50.1539 GTEX-Y9LG-1626-SM-5IFHM 1 B1 6 pieces. up to 11x3mm; Well dissected mucosa with several lymphoid nodules marked. 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 129 922 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989648 207586 0.973576 0.991335 0.781709 23937 1 76 0.00338772 285 0 9.86319e+07 0.0260068 647023 9.9494e+07 7.45865e+06 23972 4.91048e+07 0 0.191867 0.991335 0.774936 9.86319e+07 0.00402583 2.1865e+07 1.88092e+07 2.19834e+07 273 2.19879e+07 1.37065e+07 0.00370623 2.20234e+07 50.0403 0.00650314 0.993023 0 50.135 GTEX-Y9LG-1726-SM-4VBQE 1 B1 2 pieces. 9.5x8 & 10x6mm; Active spermatogenesis. 7 Testis Testis 0000473 134 917 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.986276 349302 0.944297 0.989974 0.763657 33621 1 76 0.00317693 276 0 1.07486e+08 0.0554528 1.48186e+06 1.08574e+08 1.02117e+07 33681 5.34138e+07 0 0.18064 0.989974 0.756 1.07486e+08 0.00501915 2.28719e+07 1.32756e+07 2.29944e+07 283 2.31326e+07 1.57516e+07 0.0040946 2.31035e+07 49.9686 0.0136484 0.993672 0 50.1336 GTEX-Y9LG-1826-SM-4VBQC 1 B1 2 pieces. 12x8.5 & 10x7mm. Good glandular content. 7.1 Prostate Prostate 0002367 136 915 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4038 10/09/2013 TruSeq.v1 RNASEQ 0.98289 395964 0.961235 0.987981 0.757224 25726 1 76 0.0032173 272 0 1.0524e+08 0.0384601 542751 1.0652e+08 1.09442e+07 25771 5.21908e+07 0 0.204011 0.987981 0.748123 1.0524e+08 0.00570235 2.28675e+07 1.60562e+07 2.30962e+07 275 2.32174e+07 1.34419e+07 0.00445343 2.32668e+07 50.0532 0.00509529 0.993072 0 50.2488 GTEX-Y9LG-1926-SM-5IFHY 0 B1 2 pieces, 12x12 & 16x11mm; 7.3 Muscle Muscle - Skeletal 0011907 153 898 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991289 197463 0.983983 0.993287 0.853193 20764 1 76 0.00299197 279 0 9.79858e+07 0.0158253 644094 9.8648e+07 7.15651e+06 20776 4.87955e+07 0 0.130789 0.993287 0.847466 9.79858e+07 0.00378699 2.116e+07 2.04085e+07 2.14971e+07 303 2.1343e+07 1.66333e+07 0.00338868 2.1477e+07 50.1565 0.00652922 0.995284 0 50.3952 GTEX-Y9LG-2026-SM-62LFS 0 B1 2 pieces. 13x10 & 16x10mm; 10% stroma in 1. 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 154 897 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.98716 320740 0.973906 0.990952 0.806245 22928 1 76 0.00277734 274 0 9.53294e+07 0.0258391 413957 9.61998e+07 7.00258e+06 22952 4.73851e+07 0 0.167661 0.990952 0.798951 9.53294e+07 0.00333497 2.07788e+07 1.3839e+07 2.09727e+07 275 2.10023e+07 1.53904e+07 0.00305509 2.10757e+07 50.0872 0.0043031 0.994745 0 50.2322 GTEX-Y9LG-2226-SM-4VDS9 0 B1 4 pieces, up to 8x5mm; Each with 30% adipose. 6.3 Nerve Nerve - Tibial 0001323 166 885 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990216 242389 0.968705 0.991446 0.840953 23267 1 76 0.00240522 374 0 9.14663e+07 0.0311142 970038 9.22555e+07 6.19618e+06 23287 4.54953e+07 0 0.127752 0.991446 0.83376 9.14663e+07 0.00351426 1.99334e+07 1.01698e+07 2.0204e+07 341 2.00984e+07 1.22011e+07 0.00295905 2.01523e+07 50.067 0.0105147 0.992676 0 50.3371 GTEX-Y9LG-2326-SM-4VDS1 0 B1 2 pieces, 3x3 & 4x3mm. Well trimmed. Layers annotated. 8 Blood Vessel Artery - Tibial 0007610 164 887 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990353 369394 0.970961 0.991696 0.867687 21755 1 76 0.002322 210 0 8.43864e+07 0.0288251 364304 8.5093e+07 5.87952e+06 21770 4.1953e+07 0 0.103274 0.991696 0.860482 8.43864e+07 0.00350535 1.79131e+07 8.87482e+06 1.81728e+07 253 1.80045e+07 1.36493e+07 0.00291288 1.81993e+07 50.2691 0.00428125 0.993039 0 50.3599 GTEX-YB5E-0001-SM-4VDSV B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -813 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.992509 760471 0.963674 0.993781 0.814153 22552 1 76 0.00249782 285 0 1.16176e+08 0.0359228 629708 1.16903e+08 6.6991e+06 22590 5.78579e+07 0 0.149521 0.993781 0.80909 1.16176e+08 0.0034584 2.56812e+07 2.42304e+07 2.58303e+07 284 2.58887e+07 2.68437e+07 0.00297749 2.57712e+07 49.8863 0.00538658 0.995054 0 50.1447 GTEX-YB5E-0003-SM-4YUVA B1 Blood Whole Blood 0013756 -813 BP-34030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/07/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YB5E-0003-SM-53IUH B1 Blood Whole Blood 0013756 -813 BP-34030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/07/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-YB5E-0003-SM-AYKVK B1 Blood Whole Blood 0013756 -813 BP-34030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/07/2012 LCSET-8727,LCSET-9001 04/16/2016 PCR+ 30x Coverage WGS v1 (HiSeqX) EXCLUDE GTEX-YB5E-0003-SM-CLTGF B1 Blood Whole Blood 0013756 -813 BP-34030 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/07/2012 LCSET-9400 08/01/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-YB5E-0005-SM-4VDSO B1 9.2 Blood Whole Blood 0013756 -813 BP-34096 RNA isolation_PAXgene Blood RNA (Manual) 12/07/2012 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.98415 1.34342e+06 0.946908 0.986041 0.808066 19631 1 76 0.00255515 166 0 9.63138e+07 0.0525279 393223 9.76773e+07 6.41399e+06 19639 4.78884e+07 0 0.138843 0.986041 0.796786 9.63138e+07 0.00395869 2.10473e+07 9.54543e+07 2.15227e+07 185 2.15617e+07 2.07774e+07 0.00325558 2.12355e+07 49.6188 0.00402574 0.987931 0 50.5585 GTEX-YB5E-0008-SM-4VDT7 B1 9.4 Skin Cells - Cultured fibroblasts EFO_0002009 265 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.992507 1.04455e+06 0.96705 0.994083 0.841146 21821 1 76 0.00213367 286 0 1.01441e+08 0.0326026 359404 1.02045e+08 6.37294e+06 21844 5.04971e+07 0 0.125904 0.994083 0.836169 1.01441e+08 0.0031424 2.23847e+07 2.19643e+07 2.24949e+07 272 2.25274e+07 2.38878e+07 0.00263723 2.2511e+07 49.9818 0.00352201 0.995659 0 50.1228 GTEX-YB5E-0226-SM-5IFHI 2 B1 2 pieces, 15x8 & 15x8mm; all cortex, moderately autolyzed 8.2 Adrenal Gland Adrenal Gland 0002369 155 962 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991643 189803 0.976499 0.993348 0.823849 23702 1 76 0.00302407 271 0 9.54829e+07 0.0231672 1.15508e+06 9.61222e+07 7.5103e+06 23730 4.75543e+07 0 0.15265 0.993348 0.818369 9.54829e+07 0.00360577 2.10768e+07 1.23706e+07 2.12874e+07 268 2.12198e+07 1.56357e+07 0.00331442 2.12916e+07 50.0845 0.0120168 0.995054 0 50.2485 GTEX-YB5E-0326-SM-5IFHU 1 B1 2 pieces, 12x10 & 11x11mm; marked central and mid-zonal coagulative necrosis necrosis, shock vs toxic damage by drugs 8.3 Liver Liver 0001114 163 954 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990194 233133 0.985487 0.992221 0.899603 21117 1 76 0.00280514 275 0 9.5056e+07 0.0142124 360088 9.58012e+07 7.3602e+06 21129 4.73278e+07 0 0.0858844 0.992221 0.892605 9.5056e+07 0.00343639 2.0715e+07 1.1181e+07 2.08754e+07 256 2.0872e+07 2.3167e+07 0.00312012 2.09003e+07 50.0339 0.0037587 0.994248 0 50.1929 GTEX-YB5E-0426-SM-5IFHR 1 B1 2 pieces, 17x9 & 14x9mm; moderate congestion 7.6 Spleen Spleen 0002106 165 952 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989586 345337 0.96164 0.991399 0.770271 24159 1 76 0.00358466 156 0 7.78741e+07 0.0369879 287477 7.85497e+07 5.43196e+06 24188 3.8713e+07 0 0.191369 0.991399 0.763646 7.78741e+07 0.00439175 1.70493e+07 1.5826e+07 1.72729e+07 165 1.72992e+07 1.24151e+07 0.00398746 1.71632e+07 49.8028 0.00365981 0.993212 0 50.3258 GTEX-YB5E-0526-SM-4VDSD 1 B1 2 pieces, 14.5x7 & 21x10mm; well preserved, islets well seen, rep. ones delineated 6.4 Pancreas Pancreas 0001150 168 949 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991802 535262 0.97096 0.99337 0.83262 22636 1 76 0.00243596 142 0 9.6148e+07 0.0288475 163091 9.67897e+07 6.23934e+06 22663 4.78397e+07 0 0.13834 0.99337 0.827099 9.6148e+07 0.00369357 2.17814e+07 2.56874e+07 2.20345e+07 160 2.20011e+07 2.54999e+07 0.00306377 2.19782e+07 49.9739 0.001685 0.994938 0 50.2889 GTEX-YB5E-0626-SM-4VDSE 1 B1 2 pieces, 12x7.5 & 12.5x12mm; no significant pathology 7.1 Thyroid Thyroid 0002046 174 943 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.990758 608956 0.965601 0.992459 0.802664 23150 1 76 0.00238494 216 0 9.21287e+07 0.0341578 213164 9.28287e+07 6.22467e+06 23183 4.58088e+07 0 0.162938 0.992459 0.796611 9.21287e+07 0.00352385 2.00813e+07 1.35665e+07 2.02169e+07 237 2.0175e+07 1.50247e+07 0.00295342 2.02761e+07 50.1251 0.00229632 0.99416 0 50.1682 GTEX-YB5E-0726-SM-4VDSH 1 B1 2 pieces, 11x8 & 11x10mm; marked acute and focally necrotizing aspiration-pneumonia and bronchitis, rep . areas delineated. Degenerating vegetable matter noted in inflammatory debris 6.7 Lung Lung 0008952 179 938 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991582 738931 0.963185 0.993118 0.803518 24871 1 76 0.00264435 272 0 1.03332e+08 0.0362924 418208 1.04048e+08 6.50439e+06 24911 5.14052e+07 0 0.159668 0.993118 0.797988 1.03332e+08 0.00386433 2.26464e+07 1.90876e+07 2.2827e+07 307 2.27804e+07 1.65214e+07 0.0032534 2.28574e+07 50.0844 0.00401937 0.994655 0 50.1985 GTEX-YB5E-0826-SM-4VDRZ 1 B1 6 pieces, up to 9x4.5mm; all muccualris, good specimens 8.3 Esophagus Esophagus - Muscularis 0004648 186 931 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991326 446906 0.962654 0.992872 0.853317 21430 1 76 0.00232098 191 0 7.51248e+07 0.0371568 495996 7.56642e+07 4.983e+06 21443 3.73788e+07 0 0.109337 0.992872 0.847234 7.51248e+07 0.00354348 1.57779e+07 1.28862e+07 1.60031e+07 210 1.58556e+07 1.16301e+07 0.00293128 1.6045e+07 50.2969 0.00655523 0.994417 0 50.3543 GTEX-YB5E-0926-SM-4WWDQ 1 B1 1 piece, 9.5x3.5mm; squamous mucosa is ~10-15% thickness 9.7 Esophagus Esophagus - Mucosa 0006920 188 929 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.98583 656415 0.967337 0.988326 0.818073 22894 1 76 0.0026292 280 0 1.05585e+08 0.0321197 472019 1.06832e+08 1.40868e+07 22917 5.24974e+07 0 0.149265 0.988326 0.808523 1.05585e+08 0.00401426 2.36468e+07 2.8159e+07 2.35862e+07 277 2.36383e+07 2.12854e+07 0.00331998 2.38554e+07 50.2285 0.00441831 0.990823 0 49.9358 GTEX-YB5E-1026-SM-5IFI2 1 B1 6 pieces, up to 10.5x5mm; all muscularis, good specimens 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 193 924 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991771 139199 0.974425 0.993269 0.830301 22063 1 76 0.00312982 170 0 7.81595e+07 0.0252784 352051 7.86891e+07 5.76064e+06 22087 3.8922e+07 0 0.144124 0.993269 0.824712 7.81595e+07 0.00375202 1.69195e+07 6.61402e+06 1.71117e+07 186 1.70424e+07 1.40838e+07 0.00344045 1.71015e+07 50.0866 0.00447395 0.994767 0 50.2824 GTEX-YB5E-1126-SM-664NU 1 B1 1 piece, 12x2mm; mucosa is well preserved, ~90% thickness, gastric gland dilation 5.9 Stomach Stomach 0000945 196 921 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.988228 205544 0.979178 0.98932 0.812506 23067 1 76 0.00234132 348 0 9.31611e+07 0.0204281 559191 9.41667e+07 5.67966e+06 23103 4.63635e+07 0 0.166671 0.98932 0.803829 9.31611e+07 0.0033408 2.11545e+07 6.9302e+07 2.14863e+07 288 2.14066e+07 1.96304e+07 0.00284051 2.13337e+07 49.9147 0.00593831 0.990412 0 50.3891 GTEX-YB5E-1526-SM-5IFIE 1 B1 6 pieces, up to 10x2mm; mainly mucosa, ~5% lymphoid follicles 8.6 Small Intestine Small Intestine - Terminal Ileum 0001211 222 895 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989112 136068 0.974272 0.990766 0.808949 22660 1 76 0.00356093 156 0 6.55404e+07 0.0249341 380688 6.61513e+07 4.83081e+06 22677 3.26218e+07 0 0.165323 0.990766 0.801479 6.55404e+07 0.00412776 1.46472e+07 8.49791e+06 1.47447e+07 144 1.47481e+07 1.17219e+07 0.00384387 1.4744e+07 49.9931 0.00575481 0.992419 0 50.1658 GTEX-YB5E-1626-SM-5IFIQ 1 B1 1 piece, 13x875.6um; 40-60% mucosa, reasonably well-preserved 7.6 Colon Colon - Transverse 0001157 226 891 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989955 148947 0.973329 0.991536 0.807609 22911 1 76 0.00349694 181 0 7.42102e+07 0.025497 749467 7.48436e+07 5.63616e+06 22931 3.69225e+07 0 0.16572 0.991536 0.800773 7.42102e+07 0.00405835 1.65159e+07 1.11946e+07 1.66479e+07 184 1.65968e+07 1.10469e+07 0.0037772 1.66779e+07 50.1219 0.0100138 0.993117 0 50.1991 GTEX-YB5E-1726-SM-5IFJ3 1 B1 2 pieces, 14x12.5x13x12mm; fibrous tisssue is ~40% intermingled (delineated), no TDLUs (ie, ductal elements) 6.9 Breast Breast - Mammary Tissue 0008367 233 884 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991366 173719 0.975992 0.993075 0.824075 22173 1 76 0.00316026 160 0 7.62567e+07 0.0238194 554017 7.67885e+07 5.45082e+06 22190 3.79718e+07 0 0.151917 0.993075 0.818368 7.62567e+07 0.00391526 1.67142e+07 9.39022e+06 1.68605e+07 202 1.67569e+07 1.07895e+07 0.00353711 1.69415e+07 50.274 0.00721484 0.994783 0 50.2179 GTEX-YB5E-1826-SM-5IFI4 1 B1 2 pieces, 15x9 & 16x10mm; prominent glandular hyperplasia 6.7 Prostate Prostate 0002367 238 879 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989678 303292 0.961712 0.991701 0.731606 24548 1 76 0.00319963 144 0 7.40801e+07 0.0380062 252827 7.47001e+07 5.29105e+06 24578 3.68502e+07 0 0.230106 0.991701 0.725534 7.40801e+07 0.00406835 1.62823e+07 1.10225e+07 1.64639e+07 162 1.64564e+07 9.61879e+06 0.0036331 1.64323e+07 49.9634 0.00338456 0.993723 0 50.2772 GTEX-YB5E-1926-SM-5IFIG 1 B1 2 pieces, 12x9 & 11x8mm; spermatogenesis is present 7.4 Testis Testis 0000473 246 871 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988291 227591 0.939029 0.990077 0.73697 32563 1 76 0.00321462 169 0 8.3498e+07 0.0606388 481138 8.43348e+07 6.1196e+06 32631 4.15723e+07 0 0.20206 0.990077 0.729657 8.3498e+07 0.00374587 1.77041e+07 1.09701e+07 1.77844e+07 168 1.78247e+07 1.42926e+07 0.00347976 1.77975e+07 49.9618 0.00570509 0.991863 0 50.1131 GTEX-YB5E-2026-SM-5IFIS 0 B1 1 piece, 10.5x2mm; squamous epithelium is ~1.5% thickness 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 261 856 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988711 194872 0.971338 0.990727 0.784271 22870 1 76 0.00330931 198 0 7.32294e+07 0.0284372 261100 7.39148e+07 5.51052e+06 22901 3.64418e+07 0 0.187067 0.990727 0.776999 7.32294e+07 0.00422674 1.58992e+07 7.98124e+06 1.6028e+07 165 1.60286e+07 1.19634e+07 0.00376709 1.60404e+07 50.0185 0.00353244 0.992744 0 50.2017 GTEX-YB5E-2126-SM-5IFI7 0 B1 2 pieces, 12x9 & 17x10mm; fibrous tissue is ~20% specimen, delineated 7.9 Adipose Tissue Adipose - Subcutaneous 0002190 263 854 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988202 289640 0.977413 0.990333 0.820109 22039 1 76 0.00309326 164 0 7.85027e+07 0.0223638 328499 7.9269e+07 5.99269e+06 22058 3.90659e+07 0 0.157303 0.990333 0.812182 7.85027e+07 0.00389667 1.71539e+07 8.28793e+06 1.74111e+07 193 1.74008e+07 1.28486e+07 0.0034941 1.7318e+07 49.8808 0.00414411 0.992465 0 50.3721 GTEX-YB5E-2226-SM-5IFJ5 0 B1 2 pieces, 13x11 & 15x8mm; less than ~5% interstitial adipose tissue 8.2 Muscle Muscle - Skeletal 0011907 268 849 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991933 199043 0.982065 0.993542 0.864408 20797 1 76 0.0028701 284 0 9.14495e+07 0.017714 550866 9.20439e+07 6.87034e+06 20811 4.55588e+07 0 0.117657 0.993542 0.858826 9.14495e+07 0.00353129 2.01494e+07 1.29932e+07 2.02448e+07 273 2.01341e+07 1.71116e+07 0.00320016 2.03974e+07 50.3249 0.00598482 0.995151 0 50.1182 GTEX-YB5E-2326-SM-5IFIJ 0 B1 4 pieces, up to ~0.7-1.0, discontinous rim of adherent fat ,rep areas delineated 5.9 Nerve Nerve - Tibial 0001323 274 843 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988369 237831 0.968255 0.99058 0.763124 23929 1 76 0.00315284 158 0 7.46622e+07 0.0315092 220942 7.53722e+07 5.73248e+06 23965 3.71344e+07 0 0.20513 0.99058 0.755935 7.46622e+07 0.0041104 1.63186e+07 6.77635e+06 1.64861e+07 167 1.64778e+07 1.13238e+07 0.00363055 1.64876e+07 50.0149 0.00293135 0.992791 0 50.2553 GTEX-YB5E-2426-SM-5IFIV 0 B1 4 pieces, up to 6x6mm; reasonably clean specimens, discontinuous rims of fibrous tissue, ~0.5mm around all, rep areas delineated 7.3 Blood Vessel Artery - Tibial 0007610 276 841 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988629 225111 0.972522 0.990601 0.805316 22376 1 76 0.00310856 147 0 7.1663e+07 0.02717 161687 7.2343e+07 5.12655e+06 22402 3.56368e+07 0 0.167206 0.990601 0.797747 7.1663e+07 0.00414713 1.54293e+07 5.69871e+06 1.55892e+07 160 1.55419e+07 1.26725e+07 0.00362681 1.56152e+07 50.1177 0.00223501 0.992572 0 50.2578 GTEX-YB5K-0001-SM-4YUVM B1 Blood Whole Blood 0013756 -160 BP-34109 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/10/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YB5K-0001-SM-53IUP B1 Blood Whole Blood 0013756 -160 BP-34109 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/10/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-YB5K-0002-SM-AYRPK B1 Blood Whole Blood 0013756 -159 BP-34109 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/10/2012 LCSET-8653 03/25/2016 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-YB5K-0003-SM-4VDSN B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -159 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.99146 1.05808e+06 0.961059 0.993215 0.813516 21618 1 76 0.00280158 217 0 9.94942e+07 0.0375181 602935 1.00174e+08 6.18947e+06 21650 4.94773e+07 0 0.147543 0.993215 0.807996 9.94942e+07 0.00387581 2.19685e+07 2.4263e+07 2.21233e+07 232 2.21984e+07 2.26709e+07 0.00333775 2.20705e+07 49.8556 0.00601889 0.994971 0 50.1755 GTEX-YB5K-0005-SM-4VDSP B1 8.3 Blood Whole Blood 0013756 -160 BP-34096 RNA isolation_PAXgene Blood RNA (Manual) 12/07/2012 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.989286 1.18427e+06 0.944513 0.991168 0.783145 18972 1 76 0.00285135 164 0 9.50304e+07 0.0548945 253369 9.58772e+07 6.27597e+06 18985 4.72611e+07 0 0.161368 0.991168 0.776229 9.50304e+07 0.00428181 2.03083e+07 7.00656e+07 2.0771e+07 196 2.07822e+07 1.72863e+07 0.00356522 2.05009e+07 49.6593 0.00264264 0.993049 0 50.5632 GTEX-YB5K-0008-SM-4VDT8 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 284 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.993141 881467 0.972901 0.994557 0.857861 21223 1 76 0.00208339 288 0 1.12385e+08 0.0267832 405158 1.13e+08 7.17276e+06 21245 5.59786e+07 0 0.11504 0.994557 0.853191 1.12385e+08 0.0031193 2.51788e+07 2.32093e+07 2.52626e+07 282 2.53049e+07 2.93629e+07 0.00260061 2.52961e+07 49.9913 0.00358546 0.995972 0 50.0831 GTEX-YB5K-0126-SM-5IFJ2 1 B1 2 pieces. 8x8 & 11x8mm; No extraneous fat 8.2 Heart Heart - Left Ventricle 0006566 160 1336 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992082 163160 0.984764 0.99368 0.877104 20159 1 76 0.00325872 269 0 8.6537e+07 0.015003 1.60526e+06 8.70874e+07 6.68748e+06 20166 4.31192e+07 0 0.10766 0.99368 0.871561 8.6537e+07 0.00377889 1.86542e+07 1.68453e+07 1.8966e+07 257 1.87328e+07 1.51967e+07 0.00351838 1.90031e+07 50.3581 0.0184328 0.995279 0 50.4145 GTEX-YB5K-0226-SM-5IFJE 0 B1 2 pieces, 10x7 & 13x7mm; 8.3 Heart Heart - Atrial Appendage 0006631 162 1335 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.99128 148684 0.981007 0.992775 0.842226 21596 1 76 0.00330908 199 0 8.55401e+07 0.018731 1.5652e+06 8.61626e+07 6.30764e+06 21610 4.26272e+07 0 0.138781 0.992775 0.836141 8.55401e+07 0.00380174 1.83454e+07 2.14306e+07 1.83583e+07 254 1.82127e+07 1.38966e+07 0.00355504 1.86125e+07 50.5429 0.0181657 0.994269 0 50.0175 GTEX-YB5K-0326-SM-5IFJQ 1 B1 6 pieces. up to 8x3mm; Fibrofatty adventitia on all up to 1 mm thick. No plaques. 7.8 Blood Vessel Artery - Aorta 0001496 164 1333 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992154 187904 0.977706 0.993676 0.851504 22728 1 76 0.00291519 208 0 8.96825e+07 0.0219499 288215 9.02533e+07 6.155e+06 22748 4.46582e+07 0 0.126201 0.993676 0.846119 8.96825e+07 0.0036283 1.95177e+07 6.74677e+06 1.97237e+07 226 1.96797e+07 1.81283e+07 0.0032712 1.96941e+07 50.0182 0.0031934 0.995198 0 50.2625 GTEX-YB5K-0426-SM-5LUA4 1 B1 2 pieces. 5x3 & 9x5mm; 90% adipose. Small artery with plaque in one and very small artery in other. 6.4 Blood Vessel Artery - Coronary 0001621 166 1331 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 EXCLUDE 0.990978 284551 0.977769 0.993252 0.860231 21664 1 76 0.00454492 138 0 6.52722e+07 0.0220079 545210 6.57156e+07 5.62579e+06 21673 3.24513e+07 0 0.117538 0.993252 0.854426 6.52722e+07 0.00381876 1.43725e+07 6.36226e+06 1.44908e+07 156 1.44405e+07 1.12015e+07 0.00418267 1.45684e+07 50.2204 0.0082965 0.995526 0 50.205 GTEX-YB5K-0526-SM-5LUAS 1 B1 2 pieces. 8x8 & 9.5x9mm; Well trimmed. 6 Thyroid Thyroid 0002046 190 1308 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990697 757026 0.963842 0.9925 0.779358 27362 1 76 0.00464521 380 0 1.74769e+08 0.0356668 860111 1.7609e+08 1.52336e+07 27439 8.68844e+07 0 0.184484 0.9925 0.773513 1.74769e+08 0.00381811 3.78715e+07 1.98977e+07 3.80506e+07 406 3.79709e+07 2.56437e+07 0.00423241 3.82594e+07 50.1892 0.0048845 0.994303 0 50.118 GTEX-YB5K-0626-SM-5LUB5 1 B1 6 pieces. up to 9x7mm; Well trimmed muscularis. 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 196 1303 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991385 316234 0.975859 0.993438 0.85792 21488 1 76 0.00440045 138 0 6.39562e+07 0.0239229 476495 6.43786e+07 5.42159e+06 21500 3.18031e+07 0 0.117939 0.993438 0.85229 6.39562e+07 0.00372712 1.37517e+07 5.93569e+06 1.38768e+07 154 1.38267e+07 1.08329e+07 0.00406448 1.39314e+07 50.1887 0.00740145 0.99549 0 50.2263 GTEX-YB5K-0726-SM-5LU8R 1 B1 6 pieces. up to 10x5mm; Well trimmed. 6.9 Esophagus Esophagus - Muscularis 0004648 200 1299 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.99249 236899 0.977383 0.994284 0.863662 21266 1 76 0.00445016 162 0 7.17402e+07 0.0224002 580989 7.21526e+07 6.11086e+06 21275 3.56998e+07 0 0.113721 0.994284 0.858725 7.17402e+07 0.00354303 1.53848e+07 7.48443e+06 1.55014e+07 177 1.54539e+07 1.23434e+07 0.00399741 1.55577e+07 50.1674 0.00805223 0.996079 0 50.1887 GTEX-YB5K-0826-SM-5YYB7 1 B1 1 piece. 7x5mm; Well dissected: no muscularis propria. 8.2 Esophagus Esophagus - Mucosa 0006920 204 1296 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992029 218160 0.974647 0.993056 0.826004 23576 1 76 0.00269984 284 0 1.04785e+08 0.0248441 677320 1.05518e+08 4.70617e+06 23598 5.22064e+07 0 0.148643 0.993056 0.820268 1.04785e+08 0.00320907 2.33856e+07 1.37214e+07 2.34835e+07 280 2.34559e+07 2.11324e+07 0.00295419 2.3522e+07 50.0704 0.00641899 0.994083 0 50.1045 GTEX-YB5K-1426-SM-5IFIB 1 B1 2 pieces. 9x9 & 14x8mm; Inactive. 1 has adherent stroma. 8 Ovary Ovary 0000992 234 1269 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.991071 148030 0.973465 0.992812 0.787325 23667 1 76 0.00328652 164 0 7.74114e+07 0.0257788 192382 7.79719e+07 6.1021e+06 23696 3.85232e+07 0 0.18614 0.992812 0.781666 7.74114e+07 0.00382037 1.69182e+07 6.72203e+06 1.70502e+07 171 1.70629e+07 1.34458e+07 0.00355298 1.70342e+07 49.9579 0.00246733 0.994553 0 50.1943 GTEX-YB5K-1626-SM-5IFIN 1 B1 2 pieces. 14x10 & 13x11mm; Ducts and lobules present. Adipose is 50-60%. 7.9 Breast Breast - Mammary Tissue 0008367 241 1262 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991196 186080 0.975687 0.992992 0.833961 23086 1 76 0.00319902 206 0 8.11603e+07 0.0240222 553984 8.17331e+07 6.38240e+06 23105 4.04126e+07 0 0.141726 0.992992 0.828117 8.11603e+07 0.00390125 1.7937e+07 8.47799e+06 1.80361e+07 209 1.80088e+07 1.37252e+07 0.0035495 1.81042e+07 50.132 0.00677797 0.994788 0 50.1377 GTEX-YB5K-1726-SM-5IFIZ 1 B1 2 pieces. 2x1 & 2x1mm; Very well dissected. no extraneous tissue. 8.1 Salivary Gland Minor Salivary Gland 0006330 244 1260 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.98891 224610 0.972978 0.990784 0.794668 23671 1 76 0.00350227 181 0 7.6833e+07 0.025751 198125 7.75477e+07 5.73479e+06 23706 3.81981e+07 0 0.17831 0.990784 0.787344 7.6833e+07 0.00427438 1.72292e+07 1.55142e+07 1.73453e+07 177 1.73827e+07 1.27854e+07 0.0038876 1.73326e+07 49.9279 0.00255488 0.992657 0 50.1679 GTEX-YB5K-1826-SM-5IFJC 1 B1 2 pieces. 9x8 & 7x7mm; Very well dissected. no extraneous adipose. 2mm focus of blood vessels. 6.5 Pancreas Pancreas 0001150 264 1240 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990837 233071 0.97724 0.99297 0.845507 20920 1 76 0.00353695 104 0 7.63517e+07 0.0222148 266920 7.68923e+07 5.69404e+06 20935 3.7988e+07 0 0.131733 0.99297 0.839563 7.63517e+07 0.00447717 1.74944e+07 1.72451e+07 1.77949e+07 115 1.77329e+07 2.20453e+07 0.00400605 1.77164e+07 49.9768 0.00347135 0.995103 0 50.4257 GTEX-YB5K-1926-SM-4VDT4 2 B1 2 pieces. 11x10 & 12x8mm; Focally fragmented. 7.1 Spleen Spleen 0002106 267 1237 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.989904 698573 0.953967 0.99156 0.769363 25345 1 76 0.00284931 272 0 1.07937e+08 0.0449063 609073 1.08856e+08 7.61974e+06 25388 5.36104e+07 0 0.184603 0.99156 0.76287 1.07937e+08 0.00405179 2.34036e+07 2.20605e+07 2.3565e+07 328 2.35423e+07 1.53725e+07 0.00344955 2.36136e+07 50.0755 0.00559523 0.993216 0 50.1719 GTEX-YB5K-2026-SM-4VDT3 1 B1 6 pieces. up to 8x3.5mm; 5/6 have well trimmed subcutaneous fat. 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 269 1236 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4040 10/17/2013 TruSeq.v1 RNASEQ 0.991691 399504 0.97242 0.993068 0.848251 24375 1 76 0.00249086 376 0 1.03399e+08 0.0273746 890914 1.04121e+08 6.85446e+06 24397 5.1448e+07 0 0.124169 0.993068 0.842371 1.03399e+08 0.00357784 2.26161e+07 1.07453e+07 2.28381e+07 362 2.27514e+07 1.64052e+07 0.00303359 2.28437e+07 50.1013 0.00855654 0.994445 0 50.2442 GTEX-YB5K-2126-SM-4WWDJ 1 B1 1 piece. 10x4mm; well trimmed subcutaneous fat; about 10% internal adipose. 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 284 1221 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986724 347232 0.968814 0.989523 0.799641 23875 1 76 0.00276649 229 0 8.47194e+07 0.0309392 736002 8.56164e+07 1.07698e+07 23898 4.21047e+07 0 0.169173 0.989523 0.791263 8.47194e+07 0.00429194 1.84603e+07 1.18476e+07 1.84607e+07 208 1.84712e+07 1.35129e+07 0.00352706 1.86806e+07 50.2817 0.0085965 0.992322 0 50.0006 GTEX-YB5K-2226-SM-4WWG1 1 B1 2 pieces. 12x11 & 12x12mm; Central holes. 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 287 1219 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.990618 300249 0.976232 0.992813 0.840334 23106 1 76 0.00265997 277 0 9.80789e+07 0.02347 584139 9.87889e+07 1.24874e+07 23128 4.87856e+07 0 0.135898 0.992813 0.834295 9.80789e+07 0.00405952 2.16056e+07 9.31328e+06 2.16743e+07 316 2.16731e+07 1.70102e+07 0.00335819 2.18186e+07 50.1673 0.005913 0.995008 0 50.0794 GTEX-YB5K-2326-SM-5IFHD 1 B1 2 pieces. 10.5x9 & 13x9mm; Very well trimmed of extraneous tissue. 8.5 Muscle Muscle - Skeletal 0011907 291 1215 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992808 146257 0.984413 0.994303 0.876164 19246 1 76 0.00325996 273 0 9.20384e+07 0.0153851 867767 9.25657e+07 6.88996e+06 19254 4.58716e+07 0 0.108249 0.994303 0.871173 9.20384e+07 0.00388632 2.02022e+07 1.5014e+07 2.0545e+07 262 2.04209e+07 1.79747e+07 0.00357267 2.04544e+07 50.041 0.0093746 0.995798 0 50.4206 GTEX-YB5K-2426-SM-5IFHP 1 B1 2 pieces. 5x4 & 6x4mm; 10% adherent adipose. 6.9 Nerve Nerve - Tibial 0001323 293 1214 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988607 147203 0.967962 0.990521 0.759697 23313 1 76 0.00334995 151 0 6.88639e+07 0.0318097 306891 6.95229e+07 5.23225e+06 23339 3.42647e+07 0 0.208265 0.990521 0.752495 6.88639e+07 0.0042352 1.51232e+07 6.17064e+06 1.52637e+07 152 1.52348e+07 1.01902e+07 0.00379172 1.52779e+07 50.0706 0.00441424 0.992434 0 50.2313 GTEX-YB5K-2526-SM-62LEW 0 B1 2 pieces. 3.5x2 & 4x4mm; Very well trimmed of extraneous tissue. 6.4 Blood Vessel Artery - Tibial 0007610 298 1209 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.988555 164941 0.974929 0.992606 0.850664 21076 1 76 0.00267502 155 0 7.21492e+07 0.0246953 335716 7.26866e+07 5.15258e+06 21092 3.58486e+07 0 0.124265 0.992606 0.844374 7.21492e+07 0.00353842 1.54004e+07 5.63833e+06 1.55377e+07 166 1.55448e+07 1.41929e+07 0.00310495 1.56585e+07 50.1823 0.00461868 0.996658 0 50.2218 GTEX-YBZK-0001-SM-58Q92 B1 Blood Whole Blood 0013756 -119 BP-34429 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/17/2012 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-YBZK-0001-SM-5DWTQ B1 Blood Whole Blood 0013756 -119 BP-34429 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/17/2012 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-YBZK-0001-SM-DLIPP B1 Blood Whole Blood 0013756 -119 BP-34429 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/17/2012 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-YBZK-0005-SM-59HKG B1 8.8 Blood Whole Blood 0013756 -119 BP-34379 RNA isolation_PAXgene Blood RNA (Manual) 12/14/2012 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.954058 651011 0.966858 0.959727 0.792696 20908 1 76 0.00282989 120 0 9.27621e+07 0.0310447 230772 9.66546e+07 1.80915e+07 20932 4.59193e+07 0 0.174162 0.959727 0.760772 9.27621e+07 0.00969143 2.12585e+07 1.24475e+08 2.11471e+07 146 2.12875e+07 2.30697e+07 0.0062404 2.16653e+07 50.4398 0.00238759 0.965395 0 49.8686 GTEX-YBZK-0008-SM-59HL6 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 31 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.983482 584690 0.973745 0.989598 0.861383 20257 1 76 0.00223209 154 0 7.31686e+07 0.0259121 177796 7.39377e+07 1.37357e+07 20271 3.62796e+07 0 0.112362 0.989598 0.852423 7.31686e+07 0.00805486 1.62651e+07 1.51006e+07 1.63857e+07 146 1.65581e+07 1.8638e+07 0.00512548 1.65271e+07 49.9531 0.00240467 0.995713 0 50.1847 GTEX-YBZK-0226-SM-59HLO 0 B1 3 pieces ~6mm d. : well trimmed with only scant attached adipose tissue; atherosclerotic plaque with calcification and occlusion up to 70% 7.1 Blood Vessel Artery - Tibial 0007610 45 915 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.981687 197683 0.97162 0.987036 0.814179 22884 1 76 0.0026564 132 0 6.4244e+07 0.0279502 405917 6.50878e+07 1.21477e+07 22902 3.18666e+07 0 0.157441 0.987036 0.803624 6.4244e+07 0.00847126 1.38262e+07 7.3298e+06 1.39892e+07 142 1.40481e+07 1.0784e+07 0.00554807 1.40825e+07 50.0612 0.00623645 0.992386 0 50.293 GTEX-YBZK-0326-SM-59HLN 1 B1 2 pieces ~17x12mm ; both with internal adipose tissue comprising 20-50% of tissue. Atrophy and interstitial fibrosis. 8.6 Muscle Muscle - Skeletal 0011907 50 910 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.98193 351989 0.973995 0.988449 0.823227 22989 1 76 0.00244937 166 0 8.4367e+07 0.0256941 1.07353e+06 8.53529e+07 1.65685e+07 23011 4.18141e+07 0 0.150768 0.988449 0.813718 8.4367e+07 0.00843767 1.8104e+07 9.217e+06 1.82118e+07 172 1.83678e+07 1.69955e+07 0.00542377 1.84412e+07 50.0996 0.0125775 0.994968 0 50.1484 GTEX-YBZK-0426-SM-59HLM 1 B1 3 pieces ~5mm d. ; two with significant attached adipose tissue nubbins up to ~3mm thick. 7.1 Nerve Nerve - Tibial 0001323 60 900 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4419 01/14/2014 TruSeq.v1 RNASEQ 0.9816 314462 0.970385 0.987645 0.790318 24675 1 76 0.00266174 173 0 8.04928e+07 0.0292801 304246 8.14997e+07 1.51962e+07 24705 3.99001e+07 0 0.180067 0.987645 0.780554 8.04928e+07 0.00879107 1.75943e+07 8.09376e+06 1.77558e+07 169 1.79132e+07 1.38157e+07 0.00570765 1.78872e+07 49.9636 0.00373309 0.99369 0 50.2285 GTEX-YEC3-0002-SM-4W1YI B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -110 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988695 1.59598e+06 0.946349 0.989889 0.817364 22516 1 76 0.00362602 385 0 1.27053e+08 0.0533151 1.67005e+06 1.2835e+08 4.54018e+06 22547 6.3197e+07 0 0.128984 0.989889 0.8091 1.27053e+08 0.00429219 2.72892e+07 5.32833e+07 2.77709e+07 356 2.76997e+07 2.53987e+07 0.0039587 2.75506e+07 49.8651 0.0130117 0.991082 0 50.4373 GTEX-YEC3-0004-SM-4YUXB B1 Blood Whole Blood 0013756 -110 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YEC3-0004-SM-53IVL B1 Blood Whole Blood 0013756 -110 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-YEC3-0004-SM-6UH35 B1 Blood Whole Blood 0013756 -110 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 LCSET-6032 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YEC3-0005-SM-4W21J B1 7.6 Blood Whole Blood 0013756 -110 BP-34671 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2012 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.970393 1.05543e+07 0.880583 0.970057 0.712938 23572 1 76 0.00397749 527 0 2.89295e+08 0.118595 1.26976e+06 2.98225e+08 1.89012e+07 23629 1.43048e+08 0 0.167646 0.970057 0.69159 2.89295e+08 0.00489422 5.79899e+07 3.5525e+08 5.83799e+07 468 5.85511e+07 4.34955e+07 0.00443601 5.79942e+07 49.7611 0.00425775 0.96972 0 50.1676 GTEX-YEC3-0008-SM-4W1YF B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 281 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.987101 1.64963e+06 0.949539 0.987775 0.852438 21895 1 76 0.00357182 380 0 1.29845e+08 0.0502726 849860 1.31452e+08 5.41288e+06 21908 6.45079e+07 0 0.0971006 0.987775 0.842017 1.29845e+08 0.00428486 2.76297e+07 5.27463e+07 2.80526e+07 395 2.78867e+07 2.38363e+07 0.00392809 2.79578e+07 50.0637 0.00646516 0.98845 0 50.3797 GTEX-YEC3-0226-SM-5IFJO 1 B1 2 pieces, 7x6 and 6x6mm; extensive interstitial fibrosis, organizing, rep foci delineated, with emphysematous changes 8.1 Lung Lung 0008952 224 1198 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.991642 223766 0.975227 0.993256 0.810586 25005 1 76 0.0029824 279 0 1.10408e+08 0.0243539 325191 1.11158e+08 8.51830e+06 25046 5.49811e+07 0 0.164641 0.993256 0.805119 1.10408e+08 0.00354162 2.45472e+07 9.36666e+06 2.47091e+07 308 2.47033e+07 2.04723e+07 0.00326156 2.47233e+07 50.0202 0.0029255 0.99487 0 50.1644 GTEX-YEC3-0226-SM-DO11B 1 B1 2 pieces, 7x6 and 6x6mm; extensive interstitial fibrosis, organizing, rep foci delineated, with emphysematous changes 7.6 Lung Lung 0008952 224 1198 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987474 413666 0.975514 0.991678 0.819504 25324 1 76 0.00217093 280 0 1.18451e+08 0.0241693 470018 1.19445e+08 1.12774e+07 25359 5.88462e+07 0 0.15601 0.991678 0.812684 1.18451e+08 0.00468351 2.62724e+07 1.01395e+07 2.64778e+07 328 2.66522e+07 2.19769e+07 0.00342189 2.65531e+07 49.9069 0.00393502 0.995882 0 50.1947 GTEX-YEC3-0326-SM-5IFJJ 1 B1 2 pieces, 5x6 and 4x4mm; 60% occlusive focally calcified atherosclerosis, one has circumferential adherent fat up to ~2mm thick, delineated 6.6 Blood Vessel Artery - Coronary 0001621 237 1186 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990776 147415 0.975226 0.992592 0.826832 22336 1 76 0.00289387 141 0 6.42391e+07 0.0244682 291799 6.47186e+07 4.77415e+06 22355 3.19681e+07 0 0.148394 0.992592 0.820707 6.42391e+07 0.0036983 1.40865e+07 4.83052e+06 1.41629e+07 153 1.41378e+07 1.12036e+07 0.00329535 1.42233e+07 50.1507 0.00450874 0.994408 0 50.1353 GTEX-YEC3-0426-SM-4YCEP 1 B1 2 pieces, 12x9 and 11x8 mm 8.6 Heart Heart - Atrial Appendage 0006631 239 1184 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.988014 348330 0.98075 0.992254 0.848289 21971 1 76 0.00218104 268 0 1.02379e+08 0.019002 2.15689e+06 1.03179e+08 1.58644e+07 21985 5.08774e+07 0 0.132461 0.992254 0.841719 1.02379e+08 0.00395532 2.20885e+07 2.34151e+07 2.19015e+07 323 2.18873e+07 1.45867e+07 0.00306439 2.24508e+07 50.6355 0.0209044 0.996495 0 49.7875 GTEX-YEC3-0426-SM-5IFK1 1 B1 2 pieces, 12x9 and 11x8 mm 8.3 Heart Heart - Atrial Appendage 0006631 239 1184 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.990965 197512 0.981429 0.992664 0.842521 22203 1 76 0.00269849 268 0 1.01682e+08 0.0183021 1.71331e+06 1.02434e+08 7.70932e+06 22223 5.06523e+07 0 0.138908 0.992664 0.83634 1.01682e+08 0.00336779 2.18385e+07 2.68229e+07 2.17916e+07 319 2.17348e+07 1.53244e+07 0.00303257 2.20717e+07 50.3846 0.016726 0.994364 0 49.9462 GTEX-YEC3-0426-SM-CYPS8 1 B1 2 pieces, 12x9 and 11x8 mm 8.3 Heart Heart - Atrial Appendage 0006631 239 1184 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-9770 09/23/2016 TruSeq.v1 RNASEQ 0.993549 684482 0.980049 0.99487 0.852682 24100 1 76 0.00330253 376 0 1.67378e+08 0.0196537 3.11883e+06 1.68241e+08 1.60789e+07 24133 8.34004e+07 0 0.127368 0.99487 0.848308 1.67378e+08 0.00488657 3.60683e+07 2.81867e+07 3.65066e+07 377 3.64704e+07 2.63609e+07 0.0040935 3.62683e+07 49.8611 0.0185379 0.996191 0 50.302 GTEX-YEC3-0526-SM-4YCF2 1 B1 6 pieces, up to 8.5x1.5mm; adherent fibrous/vasa vasorum in several up to ~0.5mm thick, minimal atherosis on luminal side 7.7 Blood Vessel Artery - Aorta 0001496 241 1183 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.98699 413437 0.975737 0.991503 0.845805 21694 1 76 0.00220379 134 0 6.0994e+07 0.0238228 156617 6.15167e+07 9.02358e+06 21707 3.02599e+07 0 0.129932 0.991503 0.838618 6.0994e+07 0.00418801 1.31808e+07 4.70146e+06 1.32646e+07 144 1.33139e+07 1.18704e+07 0.00319138 1.33934e+07 50.1488 0.00254593 0.996017 0 50.1585 GTEX-YEC3-0526-SM-5IFHN 1 B1 6 pieces, up to 8.5x1.5mm; adherent fibrous/vasa vasorum in several up to ~0.5mm thick, minimal atherosis on luminal side 6.4 Blood Vessel Artery - Aorta 0001496 241 1183 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.990107 190167 0.976251 0.991996 0.848949 22622 1 76 0.0028938 200 0 8.70029e+07 0.0233751 288885 8.77049e+07 6.24794e+06 22635 4.32808e+07 0 0.127302 0.991996 0.842154 8.70029e+07 0.00391788 1.88266e+07 5.99143e+06 1.8973e+07 213 1.89077e+07 1.66642e+07 0.00340486 1.90511e+07 50.1888 0.00329383 0.993885 0 50.1937 GTEX-YEC3-0526-SM-D4P1X 1 B1 6 pieces, up to 8.5x1.5mm; adherent fibrous/vasa vasorum in several up to ~0.5mm thick, minimal atherosis on luminal side 6.4 Blood Vessel Artery - Aorta 0001496 241 1183 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.993726 238784 0.974803 0.995178 0.851503 22537 1 76 0.0021326 213 0 8.98707e+07 0.0248209 335900 9.03061e+07 9.84092e+06 22556 4.47773e+07 0 0.1233 0.995178 0.847397 8.98707e+07 0.00401349 1.94187e+07 8.11189e+06 1.9567e+07 231 1.95119e+07 1.691e+07 0.00307167 1.95975e+07 50.1094 0.00371957 0.99663 0 50.1903 GTEX-YEC3-0626-SM-4YCFE 1 B1 2 pieces, 10x10 and 10x6.5mm; some areas moderate moderate autolysis; Islets well-seen, rep. ones delineated 6.8 Pancreas Pancreas 0001150 242 1182 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.988713 316104 0.977289 0.99225 0.843326 21545 1 76 0.0024116 109 0 7.52486e+07 0.0223956 138572 7.58363e+07 1.10452e+07 21562 3.74001e+07 0 0.133963 0.99225 0.836791 7.52486e+07 0.00430537 1.72329e+07 2.05336e+07 1.73204e+07 123 1.73474e+07 2.09025e+07 0.00335511 1.74714e+07 50.178 0.00182725 0.995788 0 50.1267 GTEX-YEC3-0626-SM-5IFHZ 1 B1 2 pieces, 10x10 and 10x6.5mm; some areas moderate moderate autolysis; Islets well-seen, rep. ones delineated 7.1 Pancreas Pancreas 0001150 242 1182 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.99105 222924 0.977843 0.993046 0.850571 21992 1 76 0.00311103 128 0 9.62502e+07 0.021784 145432 9.69242e+07 7.59114e+06 22007 4.79184e+07 0 0.127272 0.993046 0.844656 9.62502e+07 0.00388815 2.20842e+07 2.74511e+07 2.23996e+07 150 2.23562e+07 2.81125e+07 0.00349881 2.23196e+07 49.9591 0.00150047 0.995041 0 50.3545 GTEX-YEC3-0626-SM-CMKFG 1 B1 2 pieces, 10x10 and 10x6.5mm; some areas moderate moderate autolysis; Islets well-seen, rep. ones delineated 7.1 Pancreas Pancreas 0001150 242 1182 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993562 528614 0.979491 0.994543 0.850617 22776 1 76 0.0020117 201 0 1.26943e+08 0.0201492 226828 1.27639e+08 8.12812e+06 22807 6.32648e+07 0 0.128874 0.994543 0.845975 1.26943e+08 0.00288041 2.92997e+07 3.46501e+07 2.95408e+07 244 2.95586e+07 3.83681e+07 0.00244563 2.94059e+07 49.8705 0.0017771 0.995525 0 50.2049 GTEX-YEC3-0726-SM-4YCD1 1 B1 2 pieces, 11x7 and 9x7mm; penetrating coronary artery branches in both, ~2x0.6mm, delineated patchy interesitial fibrosis 7 Heart Heart - Left Ventricle 0006566 244 1181 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.988787 310275 0.984128 0.992431 0.84904 21379 1 76 0.00217856 269 0 1.04972e+08 0.0156352 2.31253e+06 1.05773e+08 1.65175e+07 21395 5.22045e+07 0 0.135089 0.992431 0.842613 1.04972e+08 0.00375887 2.29609e+07 3.17344e+07 2.25965e+07 317 2.26196e+07 1.57336e+07 0.00296581 2.32405e+07 50.6769 0.0218632 0.996075 0 49.6001 GTEX-YEC3-0726-SM-5IFIW 1 B1 2 pieces, 11x7 and 9x7mm; penetrating coronary artery branches in both, ~2x0.6mm, delineated patchy interesitial fibrosis 8 Heart Heart - Left Ventricle 0006566 244 1181 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.990564 209185 0.984714 0.992269 0.847126 20675 1 76 0.00272237 267 0 9.62822e+07 0.0150554 1.96797e+06 9.70324e+07 7.61283e+06 20686 4.79684e+07 0 0.137588 0.992269 0.840576 9.62822e+07 0.00328107 2.07933e+07 3.08138e+07 2.09451e+07 294 2.07594e+07 1.4063e+07 0.00300124 2.11403e+07 50.4545 0.0202816 0.993974 0 50.1818 GTEX-YEC3-0726-SM-CMKFH 1 B1 2 pieces, 11x7 and 9x7mm; penetrating coronary artery branches in both, ~2x0.6mm, delineated patchy interesitial fibrosis 8 Heart Heart - Left Ventricle 0006566 244 1181 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-9116 07/18/2016 TruSeq.v1 RNASEQ 0.993146 521356 0.984419 0.99398 0.847782 22002 1 76 0.0018001 373 0 1.56348e+08 0.0153441 3.71088e+06 1.57295e+08 1.15831e+07 22022 7.79763e+07 0 0.136637 0.99398 0.842678 1.56348e+08 0.00218207 3.36487e+07 5.06952e+07 3.43867e+07 349 3.44167e+07 2.42733e+07 0.00199093 3.37402e+07 49.5037 0.0235918 0.994814 0 50.5424 GTEX-YEC3-0826-SM-4WWFP 1 B1 2 pieces, 12x8 and 10x7mm; adhererent nubbis fat/fibrous tissue on one edge of both ~1-1.5mm, delineated 6.4 Thyroid Thyroid 0002046 246 1179 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984328 317624 0.972679 0.98782 0.791981 24234 1 76 0.00255149 274 0 9.95092e+07 0.0271083 459280 1.00736e+08 1.42541e+07 24260 4.94336e+07 0 0.180698 0.98782 0.782335 9.95092e+07 0.00408756 2.18795e+07 1.35733e+07 2.19965e+07 314 2.19722e+07 1.39887e+07 0.00331681 2.22297e+07 50.2912 0.00455924 0.991312 0 50.1333 GTEX-YEC3-0826-SM-5P9JF 1 B1 2 pieces, 12x8 and 10x7mm; adhererent nubbis fat/fibrous tissue on one edge of both ~1-1.5mm, delineated 5.7 Thyroid Thyroid 0002046 246 1179 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 EXCLUDE 0.991366 153755 0.972654 0.991846 0.777929 24012 1 76 0.00302516 271 0 9.54613e+07 0.0271609 499816 9.62461e+07 3.12007e+06 24041 4.75722e+07 0 0.194725 0.991846 0.771585 9.54613e+07 0.00329791 2.08895e+07 1.15261e+07 2.12663e+07 302 2.10505e+07 1.16552e+07 0.00316147 2.11404e+07 50.1066 0.0051931 0.992325 0 50.4469 GTEX-YEC3-0926-SM-5Q5AC 1 B1 2 pieces, 8x7 and 7x7mm. 7.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 249 1177 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.990632 206142 0.976515 0.992519 0.845 21692 1 76 0.0016378 161 0 6.74572e+07 0.0232136 398927 6.79657e+07 4.67707e+06 21706 3.35724e+07 0 0.131515 0.992519 0.838678 6.74572e+07 0.00269786 1.48464e+07 6.457e+06 1.48707e+07 182 1.47933e+07 1.1507e+07 0.00216682 1.50468e+07 50.4247 0.00586954 0.994405 0 50.0408 GTEX-YEC3-1026-SM-5IFI5 0 B1 2 pieces, 10x8.5 and 10x8mm; no ductal elements, mainly adipose; ~10-15% fibrous tissue, rep areas delineated 7.5 Breast Breast - Mammary Tissue 0008367 251 1175 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988367 204099 0.976229 0.990629 0.837863 21957 1 76 0.00293558 164 0 7.38069e+07 0.0235014 394594 7.45051e+07 5.73132e+06 21975 3.67133e+07 0 0.138366 0.990629 0.830011 7.38069e+07 0.00397288 1.61748e+07 6.4734e+06 1.63025e+07 185 1.62723e+07 1.24697e+07 0.00345305 1.63654e+07 50.1426 0.0052962 0.992891 0 50.1967 GTEX-YEC3-1126-SM-5IFIH 0 B1 2 pieces, 6x3 and 4x4mm; circumferential adherent fibrous/adipose tissue up to 1.5mm thick, some with minute vessels, delineated 7.7 Blood Vessel Artery - Tibial 0007610 253 1174 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988709 274333 0.97519 0.991058 0.837651 22456 1 76 0.00296348 171 0 8.11325e+07 0.0244158 238894 8.18646e+07 6.36491e+06 22472 4.03515e+07 0 0.137539 0.991058 0.830161 8.11325e+07 0.00388805 1.74063e+07 5.80849e+06 1.75992e+07 188 1.75886e+07 1.5548e+07 0.00342467 1.75991e+07 50.0148 0.00291816 0.993408 0 50.2756 GTEX-YEC3-1226-SM-5IFI8 0 B1 2 pieces, 13x11 and 13x9.5mm; ~20% fibrous tissue with small vessels noted, rep. areas delineated 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 256 1171 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.982876 200914 0.975368 0.98492 0.807215 22969 1 76 0.00299018 148 0 6.98652e+07 0.0243626 275029 7.09349e+07 5.02085e+06 22988 3.47551e+07 0 0.168153 0.98492 0.795043 6.98652e+07 0.00394605 1.53475e+07 5.78136e+06 1.54362e+07 162 1.54329e+07 1.20676e+07 0.00346712 1.54917e+07 50.0951 0.0038772 0.986965 0 50.1442 GTEX-YEC3-1326-SM-4WWEL 0 B1 6 pieces, up to 13x4mm; squamous epithelium is ~1.5% thickness 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 258 1170 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.983279 276691 0.970196 0.986832 0.808463 24158 1 76 0.00252574 216 0 8.23243e+07 0.0296001 608519 8.34228e+07 1.12617e+07 24175 4.09021e+07 0 0.161733 0.986832 0.797817 8.23243e+07 0.00451112 1.81211e+07 1.1198e+07 1.81999e+07 217 1.82391e+07 1.39922e+07 0.00351486 1.83627e+07 50.1689 0.0072944 0.990385 0 50.1084 GTEX-YEC3-1326-SM-5PNXV 0 B1 6 pieces, up to 13x4mm; squamous epithelium is ~1.5% thickness 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 258 1170 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 EXCLUDE 0.990943 176342 0.970397 0.991676 0.793841 23950 1 76 0.00303213 208 0 8.13866e+07 0.029464 1.06684e+06 8.20697e+07 2.35516e+06 23972 4.05442e+07 0 0.176557 0.991676 0.787232 8.13866e+07 0.00359846 1.78449e+07 1.04345e+07 1.82121e+07 221 1.80085e+07 1.03581e+07 0.00331509 1.81071e+07 50.1364 0.0129991 0.992409 0 50.5092 GTEX-YEC3-1326-SM-DO92X 0 B1 6 pieces, up to 13x4mm; squamous epithelium is ~1.5% thickness 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 258 1170 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994231 820629 0.96441 0.995119 0.799305 24373 1 76 0.00178057 286 0 9.71958e+07 0.0353465 692385 9.76726e+07 5.44652e+06 24401 4.8446e+07 0 0.165105 0.995119 0.795404 9.71958e+07 0.0023042 2.12509e+07 1.75725e+07 2.15152e+07 276 2.14938e+07 1.69319e+07 0.00204215 2.13607e+07 49.8447 0.00708884 0.996007 0 50.309 GTEX-YEC3-1426-101806-SM-5PNXX 1 B1 1 piece, 8x4mm; no mucosa, all muscularis/fat, correlated with 1425 8 Stomach Stomach 0000945 263 1165 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 EXCLUDE 0.99253 276165 0.976135 0.993552 0.8258 23720 1 76 0.00291363 381 0 1.25351e+08 0.0235848 609483 1.26164e+08 3.68178e+06 23754 6.24602e+07 0 0.150335 0.993552 0.820475 1.25351e+08 0.00339508 2.70415e+07 1.11898e+07 2.74309e+07 341 2.7313e+07 2.21548e+07 0.00315411 2.72836e+07 49.9731 0.00483086 0.994574 0 50.3574 GTEX-YEC3-1426-SM-4WWEM 1 B1 1 piece, 8x4mm; no mucosa, all muscularis/fat, correlated with 1425 6 Stomach Stomach 0000945 263 1165 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.929414 371801 0.967523 0.932006 0.825031 22825 1 76 0.00298699 212 0 8.21258e+07 0.0320816 449152 8.81173e+07 1.16868e+07 22842 4.08061e+07 0 0.142492 0.932006 0.768934 8.21258e+07 0.00455653 1.76615e+07 1.4636e+07 1.76705e+07 219 1.76697e+07 1.47474e+07 0.00376958 1.78743e+07 50.2878 0.0050972 0.934597 0 50.0128 GTEX-YEC3-1426-SM-5PNXW 1 B1 1 piece, 8x4mm; no mucosa, all muscularis/fat, correlated with 1425 7.2 Stomach Stomach 0000945 263 1165 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 EXCLUDE 0.99165 212691 0.975519 0.99243 0.823673 22696 1 76 0.00291043 212 0 8.60673e+07 0.0242123 450401 8.67238e+07 2.47308e+06 22720 4.2883e+07 0 0.151846 0.99243 0.817438 8.60673e+07 0.00339605 1.862e+07 6.8793e+06 1.88453e+07 225 1.87491e+07 1.49751e+07 0.00315305 1.87809e+07 50.0424 0.00519351 0.99321 0 50.3007 GTEX-YEC3-1426-SM-D4P1S 1 B1 1 piece, 8x4mm; no mucosa, all muscularis/fat, correlated with 1425 7.2 Stomach Stomach 0000945 263 1165 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-9920 10/26/2016 TruSeq.v1 RNASEQ 0.991592 343754 0.974678 0.992971 0.819548 23264 1 76 0.00216581 279 0 9.91412e+07 0.0250621 562661 9.9843e+07 1.09933e+07 23288 4.94137e+07 0 0.15513 0.992971 0.813788 9.91412e+07 0.00352169 2.14347e+07 9.16277e+06 2.17119e+07 304 2.16766e+07 1.71046e+07 0.00284281 2.15947e+07 49.9054 0.00563546 0.99435 0 50.3213 GTEX-YEC3-1726-SM-5IFIK 0 B1 2 pieces, 9x7 and 6x5mm; well preserved, spermatogenesis is present 6.6 Testis Testis 0000473 272 1158 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988993 225348 0.925862 0.990636 0.727536 32935 1 76 0.00306087 179 0 8.72369e+07 0.0737992 746960 8.80615e+07 6.86936e+06 32990 4.34451e+07 0 0.198326 0.990636 0.720723 8.72369e+07 0.00356748 1.81018e+07 1.33542e+07 1.80994e+07 195 1.81547e+07 1.43312e+07 0.00331376 1.81727e+07 50.0247 0.00848226 0.992279 0 49.9967 GTEX-YEC3-1826-101807-SM-EYYVR 0 B1 1 piece, 9x3mm; correlates with 1825 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 282 1149 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.976998 101293 0.970819 0.980722 0.788776 23348 1 76 0.00210785 161 0 6.80292e+07 0.0290208 927042 6.93664e+07 2.72927e+06 23371 3.38023e+07 0 0.182043 0.980722 0.77357 6.80292e+07 0.00370617 1.4926e+07 6.52341e+06 1.51261e+07 181 1.50962e+07 8.38898e+06 0.00290397 1.51859e+07 50.1481 0.0133644 0.984446 0 50.333 GTEX-YEC3-1926-SM-4WWF5 1 B1 6 pieces, up to 10x4mm; all muscularis 7 Esophagus Esophagus - Muscularis 0004648 284 1147 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987911 330434 0.976413 0.989989 0.848102 23069 1 76 0.00243354 281 0 1.03868e+08 0.0232685 633302 1.04919e+08 1.36101e+07 23089 5.16806e+07 0 0.128312 0.989989 0.839611 1.03868e+08 0.00376879 2.24162e+07 1.03343e+07 2.24161e+07 313 2.23933e+07 1.85459e+07 0.00309976 2.2646e+07 50.2805 0.00603613 0.992066 0 49.9999 GTEX-YEC3-1926-SM-5IFIT 1 B1 6 pieces, up to 10x4mm; all muscularis 7.6 Esophagus Esophagus - Muscularis 0004648 284 1147 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.991767 149319 0.976143 0.993406 0.83821 21746 1 76 0.00286136 169 0 7.58915e+07 0.0235774 455673 7.63952e+07 5.75282e+06 21761 3.77943e+07 0 0.137933 0.993406 0.832683 7.58915e+07 0.00348053 1.62426e+07 6.91872e+06 1.63993e+07 197 1.63488e+07 1.28075e+07 0.00317043 1.64119e+07 50.0962 0.00596468 0.995045 0 50.2399 GTEX-YEC3-2026-SM-4WWFL 1 B1 6 pieces, up to 10x2mm; trace adherent contaminant 'floater'mucosal fragments, all muscularis/serosalfat 6.8 Colon Colon - Sigmoid 0001159 293 1139 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.989808 306374 0.976994 0.992653 0.84924 23824 1 76 0.0024285 282 0 9.40402e+07 0.0226927 511192 9.47362e+07 1.28364e+07 23845 4.67557e+07 0 0.127754 0.992653 0.843 9.40402e+07 0.00371813 2.06345e+07 9.71825e+06 2.07061e+07 284 2.07336e+07 1.72542e+07 0.00307147 2.08608e+07 50.1529 0.00539595 0.995498 0 50.0866 GTEX-YEC3-2026-SM-5CVLQ 1 B1 6 pieces, up to 10x2mm; trace adherent contaminant 'floater'mucosal fragments, all muscularis/serosalfat 6.6 Colon Colon - Sigmoid 0001159 293 1139 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.9843 225597 0.977735 0.9891 0.839897 22811 1 76 0.00470965 162 0 7.25795e+07 0.0220312 568139 7.33793e+07 1.56073e+07 22826 3.59957e+07 0 0.137838 0.9891 0.830742 7.25795e+07 0.00686548 1.57909e+07 9.32752e+06 1.59628e+07 170 1.59685e+07 1.12109e+07 0.00578234 1.60939e+07 50.1956 0.00774249 0.9939 0 50.2707 GTEX-YEC3-2026-SM-DKPOL 1 B1 6 pieces, up to 10x2mm; trace adherent contaminant 'floater'mucosal fragments, all muscularis/serosalfat 6.8 Colon Colon - Sigmoid 0001159 293 1139 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.993339 281812 0.977857 0.995161 0.851284 23739 1 76 0.00256153 283 0 1.01146e+08 0.0218232 567491 1.01638e+08 9.97418e+06 23761 5.03946e+07 0 0.126573 0.995161 0.847165 1.01146e+08 0.00262049 2.21122e+07 8.88966e+06 2.24679e+07 307 2.24526e+07 1.83244e+07 0.00259095 2.22908e+07 49.8192 0.00558344 0.996982 0 50.3989 GTEX-YEC3-2126-SM-4YCDB 0 B1 2 pieces, 11x8 and 9x8mm; less than 2% interstitial fat 8.6 Muscle Muscle - Skeletal 0011907 294 1138 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.990415 295175 0.984678 0.993434 0.872367 20711 1 76 0.00215166 284 0 1.09684e+08 0.015097 1.53571e+06 1.10409e+08 1.5197e+07 20723 5.4585e+07 0 0.112311 0.993434 0.86664 1.09684e+08 0.00367346 2.40607e+07 2.01643e+07 2.39831e+07 329 2.39442e+07 1.94592e+07 0.00291025 2.43683e+07 50.439 0.0139093 0.996453 0 49.9193 GTEX-YEC3-2126-SM-5CVLR 0 B1 2 pieces, 11x8 and 9x8mm; less than 2% interstitial fat 6.7 Muscle Muscle - Skeletal 0011907 294 1138 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.986825 234707 0.983145 0.990662 0.862298 19118 1 76 0.00458038 166 0 7.11763e+07 0.0166879 1.32806e+06 7.18473e+07 1.30486e+07 19123 3.53455e+07 0 0.120847 0.990662 0.854246 7.11763e+07 0.00675032 1.57609e+07 2.13712e+07 1.54313e+07 184 1.54158e+07 1.07156e+07 0.00566114 1.59872e+07 50.9098 0.0184844 0.994499 0 49.4716 GTEX-YEC3-2326-SM-5IFJF 1 B1 6 pieces, up to 8x4mm; all muscularis, good specimens 7.3 Esophagus Esophagus - Gastroesophageal Junction 0004550 301 1132 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.991665 212057 0.973841 0.993342 0.815406 23115 1 76 0.00290149 216 0 8.435e+07 0.0258878 312493 8.49154e+07 6.18259e+06 23140 4.2002e+07 0 0.158435 0.993342 0.809976 8.435e+07 0.00356684 1.82678e+07 7.45766e+06 1.84089e+07 216 1.83686e+07 1.47446e+07 0.0032336 1.84412e+07 50.0987 0.00368005 0.995018 0 50.1924 GTEX-YEC3-2326-SM-DO92F 1 B1 6 pieces, up to 8x4mm; all muscularis, good specimens 7.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 301 1132 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995627 415109 0.975392 0.996183 0.831996 23084 1 76 0.00173496 281 0 9.32371e+07 0.0243166 399433 9.35943e+07 5.30697e+06 23109 4.64996e+07 0 0.143396 0.996183 0.82882 9.32371e+07 0.00205765 2.01872e+07 7.48509e+06 2.03806e+07 282 2.03352e+07 1.74735e+07 0.00189622 2.02819e+07 49.9344 0.00426771 0.996739 0 50.2385 GTEX-YEC3-2426-SM-5IFJR 1 B1 1 piece, 6x3mm; correlates with 2425, all muscularis/fat 5.8 Colon Colon - Transverse 0001157 306 1127 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 EXCLUDE 0.990131 132552 0.974784 0.991781 0.821678 23638 1 76 0.00310021 203 0 7.82996e+07 0.0245455 803717 7.89485e+07 5.61065e+06 23660 3.89761e+07 0 0.153106 0.991781 0.814924 7.82996e+07 0.0037771 1.72004e+07 1.0256e+07 1.73347e+07 227 1.72724e+07 1.08499e+07 0.00343809 1.7386e+07 50.1638 0.0101803 0.99343 0 50.1945 GTEX-YEC3-2426-SM-DO11A 1 B1 1 piece, 6x3mm; correlates with 2425, all muscularis/fat 5.7 Colon Colon - Transverse 0001157 306 1127 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988096 233529 0.97539 0.991794 0.809108 23475 1 76 0.00233872 271 0 8.90224e+07 0.0239161 1.53634e+06 8.9759e+07 8.75064e+06 23511 4.42268e+07 0 0.166282 0.991794 0.802468 8.90224e+07 0.00423666 1.95572e+07 1.33745e+07 1.99965e+07 293 2.00314e+07 1.01794e+07 0.00328415 1.97959e+07 49.7044 0.0171163 0.995492 0 50.5554 GTEX-YEC3-2526-101809-SM-5CVLT 1 B1 1 piece, 7x2mm; correlates with 2525 aliquot, mucosa is 390 microns 8.7 Esophagus Esophagus - Mucosa 0006920 316 1118 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.985949 230867 0.976564 0.990091 0.84011 22396 1 76 0.00477259 152 0 7.57594e+07 0.0227888 281008 7.65176e+07 1.42654e+07 22410 3.75836e+07 0 0.136454 0.990091 0.831785 7.57594e+07 0.00688642 1.70246e+07 1.03192e+07 1.70465e+07 155 1.71175e+07 1.53755e+07 0.00582508 1.72569e+07 50.2029 0.00367246 0.994232 0 50.0321 GTEX-YEC3-2526-SM-4YCDN 1 B1 1 piece, 7x2mm; correlates with 2525 aliquot, mucosa is 390 microns 7.2 Esophagus Esophagus - Mucosa 0006920 316 1118 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.988144 334827 0.977709 0.991473 0.844023 22780 1 76 0.00243373 284 0 1.02512e+08 0.0216408 393017 1.03393e+08 1.5795e+07 22801 5.09651e+07 0 0.133686 0.991473 0.836826 1.02512e+08 0.00404151 2.31308e+07 1.45996e+07 2.31408e+07 285 2.31961e+07 2.11807e+07 0.00323492 2.34005e+07 50.2193 0.00380119 0.994803 0 50.0109 GTEX-YEC3-2526-SM-5CVLS 1 B1 1 piece, 7x2mm; correlates with 2525 aliquot, mucosa is 390 microns 7.7 Esophagus Esophagus - Mucosa 0006920 316 1118 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.983565 234922 0.977989 0.987963 0.847615 22136 1 76 0.00486732 139 0 7.59611e+07 0.0215361 315250 7.68867e+07 1.45304e+07 22147 3.76782e+07 0 0.130375 0.987963 0.837411 7.59611e+07 0.00698161 1.70728e+07 1.11698e+07 1.71382e+07 163 1.71914e+07 1.48203e+07 0.00591976 1.7341e+07 50.2167 0.00410019 0.99236 0 50.0956 GTEX-YEC3-2526-SM-CXZIH 1 B1 1 piece, 7x2mm; correlates with 2525 aliquot, mucosa is 390 microns 7.7 Esophagus Esophagus - Mucosa 0006920 316 1118 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-9767 09/14/2016 TruSeq.v1 RNASEQ 0.993996 309258 0.977875 0.99514 0.849758 23211 1 76 0.00202532 382 0 1.30554e+08 0.0216063 504537 1.31191e+08 8.49328e+06 23232 6.50849e+07 0 0.128117 0.99514 0.845627 1.30554e+08 0.00258561 2.92989e+07 1.679e+07 2.97246e+07 340 2.97043e+07 2.65866e+07 0.00230514 2.94615e+07 49.7948 0.00384581 0.996283 0 50.3606 GTEX-YEC4-0001-SM-4W1Y6 B1 9.1 Blood Whole Blood 0013756 -249 BP-34671 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2012 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.980422 3.33173e+06 0.88408 0.981896 0.682829 20002 1 76 0.00374643 131 0 1.01928e+08 0.114977 339343 1.03807e+08 3.48117e+06 20020 5.06597e+07 0 0.201251 0.981896 0.670466 1.01928e+08 0.00470401 2.07692e+07 1.60486e+08 2.121e+07 159 2.12737e+07 1.77475e+07 0.0042245 2.09323e+07 49.5955 0.00326897 0.983369 0 50.5251 GTEX-YEC4-0002-SM-4W1Z6 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -249 BP-36905 RNA isolation_Trizol Manual (Cell Pellet) 03/13/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.990677 1.28355e+06 0.955596 0.991758 0.797407 23331 1 76 0.00316045 287 0 1.36587e+08 0.0439497 876704 1.37722e+08 4.49344e+06 23377 6.79752e+07 0 0.158189 0.991758 0.790835 1.36587e+08 0.00375952 2.98506e+07 3.9122e+07 3.01994e+07 328 3.02889e+07 3.06144e+07 0.00345966 2.99173e+07 49.6914 0.00636574 0.992839 0 50.2904 GTEX-YEC4-0006-SM-4YUWY B1 Blood Whole Blood 0013756 -249 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YEC4-0006-SM-53IVG B1 Blood Whole Blood 0013756 -249 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) EXCLUDE GTEX-YEC4-0006-SM-6UH3M B1 Blood Whole Blood 0013756 -249 BP-34630 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/21/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YEC4-0008-SM-4W1YR B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 255 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989475 1.54016e+06 0.956754 0.990638 0.862716 21741 1 76 0.00362607 383 0 1.43225e+08 0.0430404 775835 1.44579e+08 5.09982e+06 21754 7.12432e+07 0 0.0940385 0.990638 0.854638 1.43225e+08 0.00427049 3.08493e+07 4.93564e+07 3.13507e+07 387 3.12135e+07 2.71476e+07 0.0039479 3.11921e+07 49.9828 0.00536618 0.9918 0 50.403 GTEX-YEC4-0126-SM-4W21T 1 B1 2 pieces, 9x6 and 8x7mm; moderate congestion 6.6 Spleen Spleen 0002106 170 1079 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.982809 1.34072e+06 0.940569 0.9836 0.776625 26332 1 76 0.0041081 374 0 1.33603e+08 0.0584275 858606 1.35831e+08 6.34833e+06 26372 6.6245e+07 0 0.163944 0.9836 0.763888 1.33603e+08 0.00496439 2.85933e+07 4.6857e+07 2.88599e+07 397 2.88061e+07 1.69557e+07 0.0045359 2.87993e+07 49.9941 0.00632113 0.984392 0 50.2321 GTEX-YEC4-0226-SM-4W1YG 1 B1 2 pieces, 8x8 and 6x5.5mm. 8.7 Heart Heart - Atrial Appendage 0006631 172 1077 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.98849 597939 0.978064 0.989488 0.840843 23007 1 76 0.00353719 373 0 1.57419e+08 0.0217356 3.7317e+06 1.59092e+08 5.09843e+06 23025 7.83885e+07 0 0.137221 0.989488 0.832004 1.57419e+08 0.00402315 3.31037e+07 5.72863e+07 3.35492e+07 369 3.32038e+07 2.18588e+07 0.00377993 3.35745e+07 50.2776 0.0234563 0.990485 0 50.3342 GTEX-YEC4-0326-SM-4W216 1 B1 2 pieces, 7.5x7.5 and 7x7mm; mild interstitial fibrosis 8.6 Heart Heart - Left Ventricle 0006566 175 1075 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.99048 820278 0.978063 0.991714 0.867515 22354 1 76 0.0034433 372 0 1.51043e+08 0.0217164 3.73214e+06 1.52305e+08 5.07073e+06 22371 7.51919e+07 0 0.110548 0.991714 0.860326 1.51043e+08 0.00403674 3.25703e+07 3.81709e+07 3.3105e+07 370 3.28854e+07 2.42026e+07 0.00373965 3.29509e+07 50.0497 0.0245043 0.992948 0 50.407 GTEX-YEC4-0426-SM-4W1ZH 1 B1 2 pieces ~2mm d. Ahdherent discontinuous fat 0.5-2mm on both 8.6 Blood Vessel Artery - Coronary 0001621 180 1071 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989729 708360 0.966909 0.990598 0.838101 24359 1 76 0.00342688 377 0 1.31967e+08 0.0328069 466007 1.3322e+08 4.6106e+06 24392 6.56575e+07 0 0.128808 0.990598 0.830221 1.31967e+08 0.00411905 2.80916e+07 1.71486e+07 2.83703e+07 371 2.82995e+07 2.25547e+07 0.00377266 2.82928e+07 49.9941 0.00349803 0.991467 0 50.2468 GTEX-YEC4-0526-SM-4W21U 1 B1 2 pieces, 9x7 and 8x7mm; moderate congestions, chronic pneumontitis 7.3 Lung Lung 0008952 185 1066 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.985998 1.11929e+06 0.966288 0.987017 0.83427 25727 1 76 0.0037606 376 0 1.57219e+08 0.0334198 980707 1.59287e+08 5.33347e+06 25767 7.81861e+07 0 0.132018 0.987017 0.823439 1.57219e+08 0.00436892 3.4349e+07 2.53729e+07 3.48245e+07 392 3.46285e+07 2.29953e+07 0.00406445 3.47047e+07 50.0549 0.00615686 0.988036 0 50.3437 GTEX-YEC4-0526-SM-CKJTE 1 B1 2 pieces, 9x7 and 8x7mm; moderate congestions, chronic pneumontitis Lung Lung 0008952 185 1066 BP-48929 DNA Extraction from Paxgene-derived Lysate Plate Based 01/30/2014 LCSET-9391 07/08/2016 Standard Exome Sequencing v5 (ICE) WES GTEX-YEC4-0626-SM-5CVLU 1 B1 2 pieces, 13x9.5 and 13x7mm; mild regressive changes 6.3 Thyroid Thyroid 0002046 188 1064 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985689 263136 0.970527 0.989963 0.76857 23531 1 76 0.00485411 119 0 6.99803e+07 0.0291919 200225 7.06898e+07 1.28046e+07 23555 3.47227e+07 0 0.201957 0.989963 0.760856 6.99803e+07 0.0068467 1.5303e+07 7.16013e+06 1.5401e+07 134 1.54699e+07 1.1856e+07 0.0058461 1.55094e+07 50.0637 0.00283245 0.994237 0 50.1596 GTEX-YEC4-0726-SM-5CVLV 1 B1 6 pieces, up to 8x2mm; adherent fat/serosa up to 1mm on all. 6.2 Blood Vessel Artery - Aorta 0001496 190 1063 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985331 276591 0.970981 0.989458 0.835677 22213 1 76 0.00478342 143 0 7.32576e+07 0.0286511 222705 7.40381e+07 1.37038e+07 22230 3.63432e+07 0 0.135304 0.989458 0.826867 7.32576e+07 0.00702013 1.56887e+07 8.06717e+06 1.58462e+07 152 1.5894e+07 1.36862e+07 0.00589711 1.59272e+07 50.0521 0.00300798 0.993584 0 50.2498 GTEX-YEC4-0826-SM-5P9FV 1 B1 2 pieces, 12x5 and 10x8mm; diffuse macrovesciular steatosis involves ~80% of parenchyma 7.4 Liver Liver 0001114 198 1060 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992064 309279 0.98053 0.992532 0.843386 21518 1 76 0.00300263 270 0 1.23142e+08 0.0191272 1.31374e+06 1.24068e+08 4.09515e+06 21541 6.13656e+07 0 0.137145 0.992532 0.837087 1.23142e+08 0.00350459 2.66344e+07 2.66096e+07 2.69856e+07 324 2.68336e+07 2.3408e+07 0.00325349 2.68446e+07 50.0103 0.0105888 0.993 0 50.3275 GTEX-YEC4-0926-SM-5PNXY 1 B1 2 pieces, 13x10 and 9x9mm; multiple penetrating small vessels 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 200 1056 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.992458 184226 0.976147 0.993279 0.831539 23462 1 76 0.00317808 277 0 9.94361e+07 0.0235823 866057 1.00109e+08 2.83163e+06 23491 4.95486e+07 0 0.144608 0.993279 0.825951 9.94361e+07 0.00357725 2.17072e+07 9.97061e+06 2.21993e+07 310 2.20654e+07 1.5064e+07 0.0033775 2.19093e+07 49.8225 0.00865115 0.994101 0 50.5604 GTEX-YEC4-1026-101814-SM-5P9FX 1 B1 1 piece (6x1mm). Squamous mucosa is ~0.5mm thick, correlated with -1025 aliquots 8.2 Esophagus Esophagus - Mucosa 0006920 205 1050 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.989786 330523 0.97394 0.990169 0.81058 24266 1 76 0.00312518 275 0 1.07978e+08 0.0256442 784421 1.0905e+08 3.75089e+06 24294 5.37515e+07 0 0.16336 0.990169 0.802611 1.07978e+08 0.00387637 2.41533e+07 1.78114e+07 2.44998e+07 305 2.43667e+07 1.91829e+07 0.00350063 2.43314e+07 49.9637 0.00719323 0.990552 0 50.3562 GTEX-YEC4-1026-SM-5P9FW 1 B1 1 piece (6x1mm). Squamous mucosa is ~0.5mm thick, correlated with -1025 aliquots 8.2 Esophagus Esophagus - Mucosa 0006920 205 1050 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.990199 284593 0.973232 0.990541 0.812511 25002 1 76 0.00340627 285 0 1.14792e+08 0.0255704 799047 1.15888e+08 3.76416e+06 25027 5.71106e+07 0 0.160721 0.990541 0.804825 1.14792e+08 0.00403128 2.55987e+07 1.96325e+07 2.5861e+07 324 2.57601e+07 2.1026e+07 0.00371867 2.57403e+07 49.9808 0.00689499 0.990883 0 50.2549 GTEX-YEC4-1026-SM-9WG7N 1 B1 1 piece (6x1mm). Squamous mucosa is ~0.5mm thick, correlated with -1025 aliquots 8.6 Esophagus Esophagus - Mucosa 0006920 205 1050 BP-61198 RNA Extraction from Paxgene-derived Lysate Plate Based 03/03/2015 LCSET-7428 07/06/2015 TruSeq.v1 RNASEQ 0.990794 275693 0.978379 0.993011 0.842881 23614 1 76 0.00262289 383 0 1.3222e+08 0.0211449 1.05738e+06 1.3315e+08 9.7003e+06 23640 6.58319e+07 0 0.135498 0.993011 0.836991 1.3222e+08 0.00367462 2.96435e+07 2.31424e+07 2.99085e+07 335 2.99291e+07 2.64179e+07 0.00314758 2.98985e+07 49.9744 0.00794123 0.995229 0 50.2225 GTEX-YEC4-1126-SM-5CVLW 1 B1 6 pieces, up to 9x4mm; mainly muscularis, a few with adherent serosa containing vessels (delineated) or peripheral nerve (ensquared) 7.5 Esophagus Esophagus - Muscularis 0004648 208 1048 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986431 265198 0.974996 0.990546 0.830797 22855 1 76 0.00490567 171 0 7.98197e+07 0.0247376 864916 8.05815e+07 1.56495e+07 22877 3.96129e+07 0 0.144199 0.990546 0.822943 7.98197e+07 0.00688616 1.72274e+07 8.78086e+06 1.73349e+07 183 1.73508e+07 1.28843e+07 0.0058918 1.751e+07 50.2284 0.0107334 0.994661 0 50.1555 GTEX-YEC4-1226-SM-5CVLX 1 B1 6 pieces, ranging from 7x5 to 10x4mm; muscularis, good specimens 7.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 209 1047 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985431 205154 0.975837 0.989921 0.836139 21994 1 76 0.00479519 128 0 6.41027e+07 0.0238889 594446 6.47553e+07 1.18854e+07 22003 3.18001e+07 0 0.139698 0.989921 0.827712 6.41027e+07 0.00699827 1.37941e+07 6.31976e+06 1.38797e+07 138 1.39067e+07 1.0848e+07 0.00589173 1.40287e+07 50.2183 0.00917988 0.994412 0 50.1548 GTEX-YEC4-1326-SM-5IFHG 2 B1 2 pieces, 9.5x8 and 12x8mm; adherent fatty nubbins on one ~2mm, delineated. Moderate saponification; occasonal Islets visible, rep. one delineated 5.9 Pancreas Pancreas 0001150 210 1047 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990717 199453 0.976659 0.992651 0.851079 21474 1 76 0.00330495 109 0 8.93504e+07 0.0230539 211885 9.00119e+07 7.04601e+06 21487 4.44875e+07 0 0.12558 0.992651 0.844824 8.93504e+07 0.00407297 2.02797e+07 2.57324e+07 2.0776e+07 132 2.06491e+07 2.67388e+07 0.00368821 2.05746e+07 49.9096 0.00235397 0.994584 0 50.6044 GTEX-YEC4-1426-SM-5IFHS 1 B1 1 piece, all muscularis with minute adherent fragment of well-preserved mucsoa; correlates acceptably with 1425 6.6 Stomach Stomach 0000945 215 1042 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.984073 148688 0.980127 0.985743 0.848906 22233 1 76 0.00342188 312 0 7.88241e+07 0.0190777 846749 7.99642e+07 5.85251e+06 22253 3.92381e+07 0 0.131221 0.985743 0.836803 7.88241e+07 0.00402839 1.79467e+07 7.55971e+07 1.82789e+07 230 1.82768e+07 1.90988e+07 0.00372462 1.80749e+07 49.7222 0.0105891 0.987412 0 50.4585 GTEX-YEC4-1526-SM-4W1YU 1 B1 2 pieces, 10x7 and 9x6mm; spermatogenesis is present 7.4 Testis Testis 0000473 216 1042 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.990055 809125 0.925886 0.990681 0.751685 34253 1 76 0.00351256 280 0 1.18536e+08 0.0738463 1.40854e+06 1.19651e+08 4.21727e+06 34327 5.89765e+07 0 0.174201 0.990681 0.74468 1.18536e+08 0.00409204 2.46735e+07 2.67512e+07 2.48588e+07 318 2.48572e+07 1.7348e+07 0.00380212 2.47546e+07 49.8966 0.011772 0.991308 0 50.1871 GTEX-YEC4-1726-SM-4W21E 1 B1 6 pieces, mucosa and stroma, ~5-10% lylmphoid elements 7.6 Small Intestine Small Intestine - Terminal Ileum 0001211 240 1019 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.9889 713796 0.962426 0.989945 0.809325 24855 1 76 0.00380793 374 0 1.20616e+08 0.037205 1.12522e+06 1.21841e+08 4.39235e+06 24890 5.99744e+07 0 0.153101 0.989945 0.801187 1.20616e+08 0.0044783 2.62254e+07 2.67366e+07 2.6645e+07 361 2.64723e+07 1.54233e+07 0.00414276 2.6515e+07 50.0402 0.00923514 0.99099 0 50.3967 GTEX-YEC4-1826-SM-4W1YP 0 B1 6 pieces, up to 8x3mm; squmaous epithelium is ~1.5% thickness 8.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 245 1014 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.987541 1.33462e+06 0.95209 0.988547 0.809681 26110 1 76 0.00354171 383 0 1.40243e+08 0.0477092 1.10728e+06 1.41867e+08 5.0396e+06 26152 6.97361e+07 0 0.142409 0.988547 0.800408 1.40243e+08 0.00435295 3.01669e+07 4.21727e+07 3.05005e+07 404 3.03731e+07 2.1848e+07 0.00394692 3.04803e+07 50.0881 0.00780503 0.989554 0 50.2749 GTEX-YEC4-1926-SM-5IFHJ 1 B1 1 piece (10x5mm), correlates with 1925 6.9 Colon Colon - Transverse 0001157 250 1010 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991326 204195 0.972285 0.993055 0.806589 24162 1 76 0.00309209 278 0 9.86135e+07 0.0274719 782809 9.93032e+07 7.0697e+06 24195 4.91052e+07 0 0.165695 0.993055 0.800987 9.86135e+07 0.00376865 2.13224e+07 1.02628e+07 2.15371e+07 277 2.14564e+07 1.53522e+07 0.00342978 2.15633e+07 50.1242 0.00788302 0.994784 0 50.2504 GTEX-YEC4-2126-101817-SM-EYYVS 0 B1 1 piece (8x3mm), correlates with2125 5.9 Skin Skin - Sun Exposed (Lower leg) 0004264 253 1008 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-10978 05/28/2017 TruSeq.v1 EXCLUDE 0.984237 158811 0.968197 0.987475 0.780857 24319 1 76 0.00223808 174 0 7.62436e+07 0.0316015 1.01898e+06 7.72107e+07 2.85137e+06 24345 3.79177e+07 0 0.18734 0.987475 0.771077 7.62436e+07 0.00364388 1.66632e+07 8.01274e+06 1.67841e+07 202 1.67998e+07 1.15136e+07 0.00293868 1.68725e+07 50.1079 0.0131973 0.990713 0 50.1807 GTEX-YEC4-2126-SM-5IFJH 0 B1 1 piece (8x3mm), correlates with2125 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 253 1008 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989438 252319 0.972315 0.991348 0.806963 23437 1 76 0.00315092 170 0 7.26376e+07 0.027477 756075 7.32716e+07 4.75083e+06 23457 3.6145e+07 0 0.165352 0.991348 0.799981 7.26376e+07 0.00407355 1.59342e+07 7.23436e+06 1.60869e+07 170 1.60546e+07 1.17913e+07 0.00361135 1.61012e+07 50.0724 0.0103188 0.993258 0 50.2384 GTEX-YEC4-2226-SM-5IFJT 0 B1 2 pieces, 9x6.5 and 8.5x7mm; <5% interstitial fat 7.2 Muscle Muscle - Skeletal 0011907 260 1001 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991878 166116 0.983095 0.993596 0.868529 20008 1 76 0.00300422 160 0 7.61117e+07 0.0166922 990886 7.66023e+07 6.01142e+06 20021 3.79174e+07 0 0.114566 0.993596 0.862967 7.61117e+07 0.00365765 1.65602e+07 9.2313e+06 1.66802e+07 180 1.6608e+07 1.48653e+07 0.00333037 1.67459e+07 50.2066 0.0129355 0.995315 0 50.1806 GTEX-YEC4-2326-SM-5IFHV 0 B1 2 pieces, 3.5x2 and 2x2mm, ~1.5mm d. Minimal adherent fibrous tissue /fat 7.2 Blood Vessel Artery - Tibial 0007610 265 997 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989676 124885 0.975736 0.991629 0.856899 21523 1 76 0.0029492 162 0 7.55662e+07 0.0239235 336430 7.62041e+07 5.24444e+06 21539 3.76035e+07 0 0.118837 0.991629 0.849726 7.55662e+07 0.00380992 1.61803e+07 5.57579e+06 1.63197e+07 179 1.62676e+07 1.4618e+07 0.00337871 1.63773e+07 50.1681 0.00441485 0.993583 0 50.2144 GTEX-YEC4-2426-SM-57WFO 0 B1 2 pieces, 11x10 and 18x8.5mm. 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 265 997 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.986828 772066 0.960443 0.990914 0.798324 23829 1 76 0.00256661 211 0 8.60011e+07 0.0392961 850419 8.67897e+07 1.18773e+07 23861 4.26927e+07 0 0.16212 0.990914 0.79107 8.60011e+07 0.00450226 1.85363e+07 2.06941e+07 1.87394e+07 217 1.87857e+07 1.30621e+07 0.00353044 1.88262e+07 50.0538 0.00979862 0.994999 0 50.2724 GTEX-YEC4-2526-SM-4W1Z2 0 B1 2 pieces, ~3.5mm d. 6.1 Nerve Nerve - Tibial 0001323 267 996 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.985726 664500 0.955295 0.986189 0.734706 26793 1 76 0.00347299 380 0 1.32378e+08 0.0444506 805374 1.34232e+08 5.52569e+06 26867 6.57128e+07 0 0.220588 0.986189 0.724559 1.32378e+08 0.00426391 2.87629e+07 2.21254e+07 2.88344e+07 384 2.87915e+07 1.77222e+07 0.00386827 2.88862e+07 50.0821 0.00599987 0.986651 0 50.0621 GTEX-YECK-0002-SM-4YUVN C1 Blood Whole Blood 0013756 471 BP-34686 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2012 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YECK-0002-SM-53IUQ C1 Blood Whole Blood 0013756 471 BP-34686 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2012 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-YECK-0002-SM-6UH15 C1 Blood Whole Blood 0013756 471 BP-34686 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 12/22/2012 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YECK-0005-SM-4W217 C1 9.1 Blood Whole Blood 0013756 471 BP-34671 RNA isolation_PAXgene Blood RNA (Manual) 12/21/2012 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.958383 3.05649e+06 0.929075 0.959928 0.743541 20453 1 76 0.00381553 196 0 1.459e+08 0.0696608 383876 1.51991e+08 4.92871e+06 20467 7.24934e+07 0 0.185533 0.959928 0.713746 1.459e+08 0.00469911 3.21873e+07 2.82758e+08 3.28932e+07 247 3.28813e+07 3.3086e+07 0.00425661 3.25251e+07 49.7278 0.00252566 0.961472 0 50.5423 GTEX-YECK-0008-SM-4W1ZG C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 553 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.986588 1.31443e+06 0.948914 0.987626 0.851469 20387 1 76 0.00385243 279 0 1.00488e+08 0.0508811 639881 1.01747e+08 3.99258e+06 20400 4.99417e+07 0 0.097445 0.987626 0.840933 1.00488e+08 0.00454462 2.15665e+07 4.0869e+07 2.18661e+07 300 2.17586e+07 1.72475e+07 0.00419816 2.18168e+07 50.0669 0.00628892 0.988664 0 50.3449 GTEX-YECK-0226-SM-4W215 0 C1 2 pieces, 9x6.5 and 18x9mm; ~25-30% fibrous tissue/bands, rep. areas delineated 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 554 1134 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989716 436992 0.9718 0.990872 0.786227 25172 1 76 0.00335824 376 0 1.16816e+08 0.0278929 483371 1.17892e+08 4.11277e+06 25213 5.80991e+07 0 0.185572 0.990872 0.779051 1.16816e+08 0.00407185 2.55434e+07 1.15711e+07 2.5676e+07 338 2.56932e+07 1.85967e+07 0.00371463 2.56591e+07 49.9668 0.00410011 0.992027 0 50.1294 GTEX-YECK-0326-SM-4W1YS 0 C1 6 pieces, from 8x3 to 9x4.5mm; squamous mucosa is 1-2% thickness 8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 557 1133 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.985997 2.88283e+06 0.93018 0.987239 0.787504 25428 1 76 0.00363305 385 0 1.55042e+08 0.0694697 883712 1.57046e+08 5.88835e+06 25474 7.70694e+07 0 0.142676 0.987239 0.777455 1.55042e+08 0.00447223 3.23656e+07 9.29114e+07 3.26332e+07 393 3.26305e+07 2.45321e+07 0.00405211 3.26378e+07 50.0056 0.00562708 0.988482 0 50.2059 GTEX-YECK-0426-SM-4W1Z5 0 C1 2 pieces, 3x3 and 4x4mm; one has partial rim of adherent fat, ~0.5mm thick, delineated 6.2 Nerve Nerve - Tibial 0001323 563 1127 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.984762 571064 0.956146 0.985341 0.711141 27841 1 76 0.00374948 376 0 1.40713e+08 0.0436201 645460 1.42806e+08 6.39932e+06 27913 6.98007e+07 0 0.245005 0.985341 0.700716 1.40713e+08 0.00454264 3.06539e+07 1.83934e+07 3.06771e+07 392 3.06853e+07 1.65821e+07 0.00414583 3.07356e+07 50.0409 0.00451983 0.985919 0 50.0188 GTEX-YECK-0526-SM-4W1ZD 0 C1 2 pieces (2x1.5 and 3x2.5mm), artery, one separate minute frament of contaminant fibrous tissue. One arery aliquot has small nubbin of fibrous tissue ~0.5mm, delineated 6.9 Blood Vessel Artery - Tibial 0007610 566 1126 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988118 932700 0.956533 0.98909 0.795858 24235 1 76 0.00361989 374 0 1.23783e+08 0.0431686 735335 1.25148e+08 4.58344e+06 24267 6.15304e+07 0 0.160675 0.98909 0.787175 1.23783e+08 0.00435424 2.60508e+07 2.79819e+07 2.6247e+07 367 2.6205e+07 1.88476e+07 0.00398671 2.62353e+07 50.0289 0.00587571 0.990061 0 50.1876 GTEX-YECK-0626-SM-4W1ZE 0 C1 2 pieces, 10.5x8 and 9x7mm; one with ~5% interstitial fat, delineated; the other is 50% adherent fibroadipose tissue, delineated 8 Muscle Muscle - Skeletal 0011907 568 1124 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.992261 1.03258e+06 0.961078 0.993274 0.851649 21040 1 76 0.00337914 269 0 1.12923e+08 0.038749 1.94867e+06 1.13688e+08 3.68099e+06 21051 5.62575e+07 0 0.10943 0.993274 0.845921 1.12923e+08 0.00394047 2.40325e+07 3.62333e+07 2.44148e+07 317 2.43135e+07 2.0351e+07 0.00365952 2.42619e+07 49.9469 0.0171405 0.994287 0 50.3946 GTEX-YECK-0726-SM-EZ6LV 0 C1 2 pieces, 9x8 and 9x8.5mm; no ductal elements, all adipose, trace fibrous tissue 5.7 Breast Breast - Mammary Tissue 0008367 572 1121 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.98218 242731 0.976311 0.983885 0.830718 22966 1 76 0.00278572 201 0 7.99278e+07 0.0233435 664786 8.1237e+07 6.38884e+06 22991 3.98028e+07 0 0.145593 0.983885 0.817331 7.99278e+07 0.00415475 1.75645e+07 8.40161e+06 1.77369e+07 215 1.77268e+07 1.20969e+07 0.00346905 1.77042e+07 49.9681 0.00818329 0.985589 0 50.2441 GTEX-YECK-0926-SM-4W214 1 C1 2 pieces, 9x7 and 7x7mm; moderate congestion/atalectasis 6.6 Lung Lung 0008952 581 1113 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.984951 1.52050e+06 0.93238 0.986077 0.677775 26617 1 76 0.00390336 205 0 1.09439e+08 0.066994 523810 1.10984e+08 4.41433e+06 26676 5.43132e+07 0 0.254605 0.986077 0.668339 1.09439e+08 0.00472609 2.31028e+07 4.91136e+07 2.32812e+07 237 2.32885e+07 1.33117e+07 0.00431425 2.32593e+07 49.9687 0.00471967 0.987204 0 50.1923 GTEX-YECK-1126-SM-4W1ZQ 1 C1 2 pieces, 3x1.5 and 2.5x2mm; subtotally occlusive atherosis, ave d. ~2mm. Adherent fat, disccontinuous, on both, ~0.5mm 6 Blood Vessel Artery - Coronary 0001621 595 1100 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4049 10/20/2013 TruSeq.v1 EXCLUDE 0.9757 24538 0.936329 0.977991 0.687221 14171 1 76 0.00416366 113 0 2.16835e+06 0.0633809 15089 2.21715e+06 140950 14171 1.07192e+06 0 0.249108 0.977991 0.672096 2.16835e+06 0.00512192 460548 786799 462848 123 465218 237557 0.00464167 463312 49.8974 0.0068056 0.980282 0 50.1245 GTEX-YECK-1226-SM-4W21G 1 C1 2 pieces, 9x7 and 8x7mm. 6.2 Heart Heart - Atrial Appendage 0006631 597 1099 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988158 559601 0.971717 0.989193 0.814035 23744 1 76 0.00358763 368 0 1.29155e+08 0.0281663 6.20947e+06 1.30566e+08 5.1723e+06 23771 6.41996e+07 0 0.157682 0.989193 0.805237 1.29155e+08 0.00430515 2.79772e+07 3.60617e+07 2.80928e+07 389 2.78437e+07 1.12206e+07 0.00394602 2.83652e+07 50.4639 0.0475583 0.990227 0 50.1031 GTEX-YECK-1326-SM-4W1ZF 1 C1 6 pieces, up to 10x2mm; marked focally calcified atherosis, focally calcified, rep. areas delineated 6 Blood Vessel Artery - Aorta 0001496 598 1099 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.982931 831068 0.95473 0.983739 0.741904 25409 1 76 0.00371324 274 0 1.13758e+08 0.0449419 349492 1.15638e+08 4.99044e+06 25461 5.64201e+07 0 0.212826 0.983739 0.72984 1.13758e+08 0.00452397 2.41686e+07 2.26895e+07 2.42734e+07 298 2.4281e+07 1.61371e+07 0.00411827 2.42689e+07 49.9875 0.00302229 0.984547 0 50.1082 GTEX-YECK-1426-SM-5IFHE 1 C1 2 pieces, both 8x7mm; ~10% fibrous tissue, rep areas delineated 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 601 1099 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.987709 239443 0.973362 0.989717 0.777665 23980 1 76 0.00329173 159 0 7.69957e+07 0.0263417 295751 7.77957e+07 5.63921e+06 24007 3.82753e+07 0 0.195698 0.989717 0.769668 7.69957e+07 0.00428636 1.69275e+07 8.22186e+06 1.70441e+07 176 1.70475e+07 1.18527e+07 0.00378804 1.70744e+07 50.0395 0.00380164 0.991726 0 50.1715 GTEX-YECK-1626-SM-5IFHQ 1 C1 1 piece, correlates with -1625 6.1 Esophagus Esophagus - Mucosa 0006920 604 1098 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.986958 231504 0.970043 0.988942 0.793673 23774 1 76 0.00320619 204 0 9.04617e+07 0.0297796 621852 9.14733e+07 6.70919e+06 23800 4.50016e+07 0 0.17637 0.988942 0.784897 9.04617e+07 0.00410417 2.01783e+07 1.00817e+07 2.02796e+07 242 2.02555e+07 1.22081e+07 0.00365428 2.03834e+07 50.1573 0.00679818 0.990925 0 50.1252 GTEX-YECK-1726-SM-5IFI3 1 C1 6 pieces, from 6x3 to 9x4mm; all muscularis, good specimens 5.8 Esophagus Esophagus - Muscularis 0004648 605 1098 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989138 195831 0.967666 0.991203 0.767555 24257 1 76 0.0033516 204 0 8.74629e+07 0.0321332 1.08278e+06 8.82391e+07 6.73649e+06 24286 4.3512e+07 0 0.200111 0.991203 0.760803 8.74629e+07 0.00425198 1.88407e+07 8.26338e+06 1.90882e+07 217 1.90672e+07 1.13804e+07 0.00380085 1.90317e+07 49.9534 0.012271 0.993268 0 50.3263 GTEX-YECK-1926-SM-4W21H 2 C1 2 pieces, 8x8 and 8x7mm; 6.4 Liver Liver 0001114 608 1096 BP-42087 RNA Extraction from Paxgene-derived Lysate Plate Based 08/08/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.987008 822900 0.964461 0.987603 0.795185 24180 1 76 0.00375419 373 0 1.62247e+08 0.0353736 1.42148e+06 1.64284e+08 6.70878e+06 24227 8.06298e+07 0 0.169276 0.987603 0.785327 1.62247e+08 0.00436673 3.51319e+07 3.74416e+07 3.53863e+07 388 3.51441e+07 1.81084e+07 0.00406028 3.54968e+07 50.2496 0.00865256 0.988197 0 50.1803 GTEX-YECK-2526-SM-EXUR2 2 C1 2 pieces, 9x6 and 8x7mm; spermatogenesis is present but tubules moderately-markedly autolyzed 5.5 Testis Testis 0000473 639 1070 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-10976 05/25/2017 TruSeq.v1 EXCLUDE 0.990389 568148 0.945163 0.991154 0.737111 29787 1 76 0.00196884 142 0 6.82759e+07 0.0546198 1.19602e+06 6.88853e+07 2.12748e+06 29835 3.39856e+07 0 0.208052 0.991154 0.73059 6.82759e+07 0.00263766 1.47251e+07 7.0973e+06 1.48499e+07 159 1.4862e+07 9.07619e+06 0.002303 1.47595e+07 49.8269 0.0173626 0.991918 0 50.2111 GTEX-YECK-2626-101825-SM-EZ6LP 3 C1 1 piece, correlates with -2625, mucosa badly autolyzed 5.8 Colon Colon - Transverse 0001157 641 1068 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-10979 05/29/2017 TruSeq.v1 EXCLUDE 0.988113 171881 0.973066 0.989528 0.831033 23624 1 76 0.00245624 276 0 8.71969e+07 0.0266489 515509 8.81197e+07 6.66791e+06 23644 4.34454e+07 0 0.142033 0.989528 0.822331 8.71969e+07 0.00368925 1.87644e+07 6.92392e+06 1.88598e+07 265 1.88417e+07 1.50176e+07 0.00307186 1.88994e+07 50.0765 0.0058501 0.990943 0 50.1267 GTEX-YECK-2826-SM-5IFHF 1 C1 6 pieces, up to 8x2mm. Muscualris; a few nubbings of adherent fat, delineated, on 2 6.1 Colon Colon - Sigmoid 0001159 650 1060 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988249 204369 0.971271 0.990104 0.808663 23596 1 76 0.00316673 167 0 7.9895e+07 0.0284695 424836 8.06935e+07 5.67928e+06 23622 3.97549e+07 0 0.162609 0.990104 0.80066 7.9895e+07 0.00404746 1.70653e+07 7.01224e+06 1.72337e+07 186 1.71975e+07 1.31777e+07 0.00360627 1.7246e+07 50.0704 0.00526481 0.99196 0 50.2456 GTEX-YF7O-0002-SM-4YUUX B1 Blood Whole Blood 0013756 -61 BP-34789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YF7O-0002-SM-53IUD B1 Blood Whole Blood 0013756 -61 BP-34789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2013 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-YF7O-0002-SM-6UH3Q B1 Blood Whole Blood 0013756 -61 BP-34789 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/02/2013 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YF7O-0004-SM-4W1ZT B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -61 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.987443 2.15631e+06 0.946794 0.988466 0.836293 22507 1 76 0.0041303 385 0 1.38907e+08 0.0521596 1.19811e+06 1.40527e+08 4.64132e+06 22530 6.90384e+07 0 0.110501 0.988466 0.826647 1.38907e+08 0.00472329 2.99132e+07 4.91229e+07 3.03558e+07 363 3.03072e+07 2.65554e+07 0.00442649 3.01344e+07 49.857 0.00852579 0.989489 0 50.3672 GTEX-YF7O-0005-SM-4W1ZU B1 8.7 Blood Whole Blood 0013756 -61 BP-34793 RNA isolation_PAXgene Blood RNA (Manual) 01/02/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.981567 4.50744e+06 0.890063 0.982939 0.733001 20706 1 76 0.00403375 272 0 1.50118e+08 0.109011 562811 1.52724e+08 4.95538e+06 20722 7.46933e+07 0 0.157062 0.982939 0.720495 1.50118e+08 0.00463626 3.04823e+07 2.24775e+08 3.12967e+07 308 3.13223e+07 2.62525e+07 0.00433458 3.07345e+07 49.5264 0.00368516 0.984311 0 50.6592 GTEX-YF7O-0008-SM-4W1ZS B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 222 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989225 1.0255e+06 0.966504 0.990562 0.877567 21082 1 76 0.0035939 378 0 1.03918e+08 0.0333221 563323 1.04908e+08 3.77676e+06 21094 5.16545e+07 0 0.0889372 0.990562 0.869284 1.03918e+08 0.0042891 2.26275e+07 2.43834e+07 2.29028e+07 340 2.28168e+07 1.94924e+07 0.00394103 2.28685e+07 50.0566 0.00536969 0.9919 0 50.3023 GTEX-YF7O-0126-SM-5IFIR 1 B1 2 pieces, 12x10 and 15x13mm; 1 has 30% fat 9 Adrenal Gland Adrenal Gland 0002369 79 570 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992242 182256 0.978632 0.993751 0.848779 23092 1 76 0.00312353 202 0 8.36678e+07 0.0208332 1.07404e+06 8.41939e+07 5.43498e+06 23114 4.16738e+07 0 0.129853 0.993751 0.843476 8.36678e+07 0.00373122 1.85872e+07 9.86692e+06 1.86509e+07 239 1.8605e+07 1.48667e+07 0.00342691 1.87489e+07 50.1926 0.0127567 0.995261 0 50.0855 GTEX-YF7O-0226-SM-5IFJ4 1 B1 4 pieces, each ~5x4mm; sclerotic plaque and medial calcification 6.6 Blood Vessel Artery - Coronary 0001621 91 558 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989985 159322 0.973007 0.991784 0.806732 23544 1 76 0.00315991 164 0 7.86491e+07 0.0266056 390940 7.93006e+07 5.63944e+06 23572 3.91436e+07 0 0.166276 0.991784 0.800104 7.86491e+07 0.00400277 1.70896e+07 6.7137e+06 1.72788e+07 183 1.72181e+07 1.29287e+07 0.00358058 1.72867e+07 50.0994 0.00492985 0.993583 0 50.2752 GTEX-YF7O-0426-SM-5P9FS 1 B1 2 pieces, 12x8.5 and 11x8mm; well trimmed 8.8 Heart Heart - Left Ventricle 0006566 101 548 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992834 367786 0.9851 0.993195 0.871445 21828 1 76 0.00283484 374 0 1.28333e+08 0.0145606 1.0994e+06 1.29212e+08 4.15734e+06 21838 6.39443e+07 0 0.113655 0.993195 0.865515 1.28333e+08 0.00337789 2.82709e+07 2.22081e+07 2.85457e+07 333 2.84798e+07 2.56953e+07 0.00310627 2.83874e+07 49.9187 0.00850846 0.993556 0 50.2418 GTEX-YF7O-0526-SM-5P9IO 1 B1 2 pieces, 10.5x8 and 13x8mm; 1 with 30% internal fat 8.6 Heart Heart - Atrial Appendage 0006631 103 546 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992334 293302 0.984693 0.992939 0.853031 21026 1 76 0.00318746 266 0 9.65873e+07 0.0150435 1.54629e+06 9.72741e+07 3.22734e+06 21036 4.81345e+07 0 0.131662 0.992939 0.847008 9.65873e+07 0.00345284 2.06072e+07 1.84506e+07 2.09399e+07 268 2.06733e+07 1.67688e+07 0.00332007 2.09205e+07 50.2972 0.0158962 0.993544 0 50.4004 GTEX-YF7O-0626-SM-4W21R 1 B1 2 pieces, 10x7.5 and 11x8mm; 1 mm fibrous area (marked) 9 Lung Lung 0008952 112 537 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989619 925914 0.962633 0.990738 0.823717 25163 1 76 0.00364797 374 0 1.25896e+08 0.0368916 529566 1.27073e+08 4.53479e+06 25201 6.26148e+07 0 0.138916 0.990738 0.816087 1.25896e+08 0.0043684 2.75709e+07 2.59612e+07 2.78751e+07 372 2.7827e+07 2.16397e+07 0.00400778 2.77773e+07 49.9553 0.00416743 0.991857 0 50.2743 GTEX-YF7O-0726-SM-4W213 0 B1 2 pieces, 11x10 and 11x6.5mm; well sampled 7.1 Thyroid Thyroid 0002046 119 530 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.986964 1.11314e+06 0.948407 0.987967 0.76723 25334 1 76 0.00355571 376 0 1.24537e+08 0.0513115 688235 1.26053e+08 4.84855e+06 25380 6.18971e+07 0 0.181178 0.987967 0.757998 1.24537e+08 0.00433111 2.67599e+07 3.59241e+07 2.69606e+07 364 2.69426e+07 1.74008e+07 0.00394302 2.69258e+07 49.9844 0.00545987 0.988971 0 50.1868 GTEX-YF7O-0826-SM-4W21F 1 B1 6 pieces, from 7x4 to 9x5mm; well trimmed 8.1 Esophagus Esophagus - Muscularis 0004648 132 517 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.990334 801547 0.961736 0.99121 0.840198 22738 1 76 0.00340948 373 0 1.13391e+08 0.0380552 1.08571e+06 1.14397e+08 4.00441e+06 22761 5.64167e+07 0 0.121538 0.99121 0.832812 1.13391e+08 0.00405072 2.397e+07 2.5882e+07 2.41428e+07 348 2.40323e+07 1.69717e+07 0.00372982 2.41996e+07 50.1734 0.00949071 0.992085 0 50.1796 GTEX-YF7O-0926-SM-5IFIF 1 B1 1 piece; comparable to 25 block 9.1 Esophagus Esophagus - Mucosa 0006920 134 515 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989202 280332 0.974218 0.991283 0.818289 24452 1 76 0.00323604 287 0 1.11203e+08 0.025057 398612 1.12181e+08 8.79566e+06 24482 5.53325e+07 0 0.155929 0.991283 0.811157 1.11203e+08 0.00392685 2.48568e+07 1.53769e+07 2.50372e+07 291 2.50773e+07 2.19852e+07 0.00358072 2.50383e+07 49.9611 0.00355328 0.993365 0 50.1808 GTEX-YF7O-1026-SM-5P9IP 1 B1 6 pieces, from 8x3.5 to 11.5x3.5mm; well trimmed 7.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 137 512 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992817 184361 0.976594 0.993317 0.839288 22904 1 76 0.00311086 283 0 1.02837e+08 0.023099 733452 1.03529e+08 3.41021e+06 22928 5.12534e+07 0 0.137306 0.993317 0.833679 1.02837e+08 0.00334504 2.23088e+07 8.67254e+06 2.24781e+07 285 2.23454e+07 1.8641e+07 0.00322789 2.24901e+07 50.1613 0.00708452 0.993817 0 50.1891 GTEX-YF7O-1326-SM-4W1ZR 1 B1 2 pieces, 17x11 and 14x8mm; scattered fat cells overall (10%) 6.3 Pancreas Pancreas 0001150 147 502 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988383 1.45525e+06 0.948981 0.989585 0.831603 22853 1 76 0.00358692 159 0 1.25559e+08 0.0503885 339986 1.2688e+08 4.45344e+06 22877 6.24298e+07 0 0.117379 0.989585 0.822942 1.25559e+08 0.00441237 2.78381e+07 7.35822e+07 2.84483e+07 189 2.82944e+07 3.49846e+07 0.00399914 2.81886e+07 49.9063 0.00267958 0.990788 0 50.542 GTEX-YF7O-1526-SM-5IFI6 0 B1 6 pieces, from 8.6x3 to 11x3mm; well trimmed 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 156 493 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989971 195489 0.975063 0.991867 0.844909 23830 1 76 0.00314172 170 0 7.67175e+07 0.0246502 507363 7.73465e+07 5.63322e+06 23846 3.81896e+07 0 0.130155 0.991867 0.838037 7.67175e+07 0.00403605 1.68434e+07 9.24695e+06 1.70528e+07 182 1.70278e+07 1.43415e+07 0.00358803 1.70091e+07 49.9725 0.00655961 0.993764 0 50.3087 GTEX-YF7O-1626-SM-5IFII 1 B1 6 pieces; from 8x3 to 9x3mm; remnants of mucosa on 5/6 pieces 6.9 Colon Colon - Sigmoid 0001159 166 483 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989225 209818 0.976425 0.991051 0.834246 21987 1 76 0.00310229 171 0 7.67493e+07 0.0233219 492746 7.74423e+07 5.71968e+06 22004 3.82084e+07 0 0.142179 0.991051 0.826781 7.67493e+07 0.00385869 1.66247e+07 6.72844e+06 1.67861e+07 188 1.67455e+07 1.27287e+07 0.00347979 1.67989e+07 50.0796 0.00636275 0.992878 0 50.2416 GTEX-YF7O-1726-SM-5IFJ9 1 B1 1 piece; comparable to 25 block 6.8 Colon Colon - Transverse 0001157 172 477 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.98901 193936 0.97419 0.991004 0.806269 23192 1 76 0.0034697 209 0 8.0677e+07 0.0247217 857362 8.14094e+07 5.87158e+06 23221 4.01236e+07 0 0.167921 0.991004 0.799015 8.0677e+07 0.0041799 1.79418e+07 1.23631e+07 1.80634e+07 217 1.80348e+07 1.13219e+07 0.00382408 1.8116e+07 50.1124 0.0105315 0.992998 0 50.1689 GTEX-YF7O-1826-SM-5IFIU 1 B1 6 pieces, from 8x2 to 11x1.5mm; excellent lymphoid nodules; mucosa preserved; pigmented macrophages 6.5 Small Intestine Small Intestine - Terminal Ileum 0001211 178 471 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989892 167449 0.973983 0.99172 0.789233 23159 1 76 0.00350277 166 0 7.6549e+07 0.0257038 771568 7.71881e+07 5.60114e+06 23179 3.81129e+07 0 0.18475 0.99172 0.782698 7.6549e+07 0.00423021 1.69684e+07 1.1608e+07 1.70538e+07 193 1.70346e+07 1.00295e+07 0.00386582 1.71258e+07 50.1335 0.00999595 0.993548 0 50.1256 GTEX-YF7O-1926-SM-4W1YQ 1 B1 2 pieces, 12x10 and 11.5x5mm; mild hyperplasia 7.8 Prostate Prostate 0002367 187 462 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.985879 1.17952e+06 0.945152 0.986833 0.747115 26891 1 76 0.00358354 375 0 1.2735e+08 0.0545949 681437 1.29049e+08 4.99904e+06 26939 6.32953e+07 0 0.198037 0.986833 0.737278 1.2735e+08 0.00428147 2.74426e+07 3.88308e+07 2.75785e+07 361 2.75397e+07 1.63956e+07 0.00393217 2.76354e+07 50.0867 0.00528043 0.987787 0 50.1235 GTEX-YF7O-2026-SM-4W1YE 1 B1 2 pieces, 12x11.5 and 13x7mm; spermatogenesis 6.5 Testis Testis 0000473 192 457 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989467 877562 0.919198 0.990322 0.719074 35387 1 76 0.00344047 381 0 1.33955e+08 0.0805114 1.96598e+06 1.35264e+08 4.78984e+06 35479 6.66457e+07 0 0.200124 0.990322 0.712115 1.33955e+08 0.00401332 2.77235e+07 3.13166e+07 2.78839e+07 332 2.79285e+07 1.95712e+07 0.00372665 2.77943e+07 49.8795 0.0145344 0.991177 0 50.1442 GTEX-YF7O-2226-SM-5CVN8 1 B1 3 pieces, from 7.5x2 to 9x8mm; glands are 5 to 50% in the 3 pieces; too much skin in sample 7.6 Salivary Gland Minor Salivary Gland 0006330 210 439 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.982124 322113 0.974171 0.98661 0.809434 24889 1 76 0.00535437 170 0 8.93096e+07 0.0239023 373463 9.05216e+07 1.67926e+07 24915 4.421e+07 0 0.164737 0.98661 0.798597 8.93096e+07 0.00756537 1.99324e+07 1.6824e+07 2.00332e+07 194 2.01433e+07 1.57021e+07 0.00645484 2.02049e+07 50.0763 0.00412568 0.991097 0 50.1261 GTEX-YF7O-2326-101833-SM-5CVN9 0 B1 1 piece; well trimmed, comparable to 25 block 6 Skin Skin - Sun Exposed (Lower leg) 0004264 222 427 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.983479 210914 0.970706 0.988559 0.770787 23800 1 76 0.00488296 141 0 6.66882e+07 0.0290774 400211 6.746e+07 1.27351e+07 23825 3.30473e+07 0 0.199919 0.988559 0.761968 6.66882e+07 0.00733902 1.45544e+07 7.42488e+06 1.45988e+07 140 1.46637e+07 1.00891e+07 0.00610468 1.48135e+07 50.2541 0.00593257 0.993639 0 50.0761 GTEX-YF7O-2426-SM-5IFJL 0 B1 2 pieces, 12x8.5 and 12x9mm; fibrofatty tissue in one, skin and fatty tissue in other 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 220 429 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990823 223445 0.977972 0.992739 0.815236 23074 1 76 0.00312016 175 0 8.43827e+07 0.0216775 350742 8.49999e+07 6.36113e+06 23097 4.20014e+07 0 0.162736 0.992739 0.809316 8.43827e+07 0.0037947 1.86231e+07 7.7199e+06 1.88159e+07 195 1.88256e+07 1.60634e+07 0.00345678 1.87729e+07 49.9299 0.00412638 0.994655 0 50.2575 GTEX-YF7O-2526-SM-5IFJX 0 B1 2 pieces, 12x8.5 and 14x9mm; well trimmed. <5% internal fat. 8.5 Muscle Muscle - Skeletal 0011907 226 423 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991736 177297 0.984852 0.993378 0.882058 19741 1 76 0.00298731 276 0 8.6319e+07 0.0149368 1.32379e+06 8.68943e+07 6.59672e+06 19747 4.30095e+07 0 0.102794 0.993378 0.876218 8.6319e+07 0.00360969 1.9052e+07 1.3341e+07 1.91307e+07 264 1.90621e+07 1.67728e+07 0.00329799 1.92518e+07 50.2475 0.0152344 0.995021 0 50.1031 GTEX-YF7O-2626-SM-5IFHK 1 B1 4 pieces, from 4.5x4 to 5x5mm; 40% intyernsal and external fat 6.3 Nerve Nerve - Tibial 0001323 232 417 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988591 230808 0.967424 0.990622 0.741707 24171 1 76 0.00316342 164 0 7.85796e+07 0.0323341 300603 7.93236e+07 5.5219e+06 24209 3.90685e+07 0 0.225717 0.990622 0.734751 7.85796e+07 0.00422783 1.72322e+07 7.09709e+06 1.73445e+07 172 1.73156e+07 1.16076e+07 0.00369454 1.74140e+07 50.1418 0.00378958 0.992653 0 50.1624 GTEX-YFC4-0001-SM-4YUWA C1 Blood Whole Blood 0013756 591 BP-34871 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YFC4-0001-SM-53ITN C1 Blood Whole Blood 0013756 591 BP-34871 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-YFC4-0001-SM-6UH16 C1 Blood Whole Blood 0013756 591 BP-34871 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YFC4-0006-SM-4RGLV C1 8.7 Blood Whole Blood 0013756 591 BP-34881 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.989283 664493 0.974896 0.991597 0.746834 20544 1 76 0.0026754 167 0 9.64402e+07 0.0246148 277482 9.72575e+07 9.25982e+06 20565 4.79588e+07 0 0.228063 0.991597 0.740558 9.64402e+07 0.00341724 2.14413e+07 5.13525e+07 2.18761e+07 191 2.18988e+07 1.78248e+07 0.00304546 2.16416e+07 49.7047 0.00285307 0.993911 0 50.5019 GTEX-YFC4-0008-SM-4RGM3 C1 9.5 Skin Cells - Cultured fibroblasts EFO_0002009 689 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990731 902609 0.973693 0.993284 0.844558 21673 1 76 0.00201641 227 0 9.28428e+07 0.0258949 303559 9.34705e+07 8.47453e+06 21697 4.61747e+07 0 0.129135 0.993284 0.838886 9.28428e+07 0.00255021 2.06944e+07 1.24334e+07 2.07552e+07 240 2.0878e+07 2.08836e+07 0.00228262 2.08014e+07 49.9081 0.00324765 0.995838 0 50.0734 GTEX-YFC4-0011-R10a-SM-4SOK5 C1, A1 8.4 Brain Brain - Frontal Cortex (BA9) 0009834 595 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.990331 845975 0.949357 0.99304 0.81982 22787 1 76 0.00222162 141 0 5.88175e+07 0.0500975 1.66292e+06 5.92297e+07 3.22752e+06 22801 2.92206e+07 0 0.129537 0.99304 0.814114 5.88175e+07 0.00287057 1.27225e+07 1.41881e+07 1.27999e+07 159 1.27911e+07 8.11899e+06 0.00254521 1.28964e+07 50.2051 0.0280758 0.99575 0 50.1517 GTEX-YFC4-0011-R11a-SM-4SOK6 C1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 595 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989717 825137 0.937657 0.992036 0.724102 23726 1 76 0.00243119 154 0 7.42658e+07 0.0618426 882446 7.4862e+07 4.2168e+06 23752 3.6919e+07 0 0.213556 0.992036 0.718335 7.42658e+07 0.00283148 1.58376e+07 1.68176e+07 1.59414e+07 168 1.60011e+07 9.94911e+06 0.00263087 1.59495e+07 49.9192 0.0117876 0.994354 0 50.1634 GTEX-YFC4-0011-R1a-SM-4V6EH C1, A1 8.6 Brain Brain - Hippocampus 0001954 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993456 788873 0.960577 0.99444 0.840534 24173 1 76 0.00249786 373 0 1.12172e+08 0.0390911 6.8485e+06 1.12799e+08 8.02389e+06 24194 5.58841e+07 0 0.120043 0.99444 0.835861 1.12172e+08 0.00283394 2.40906e+07 2.95635e+07 2.50412e+07 351 2.48514e+07 1.18274e+07 0.00266574 2.43755e+07 49.5166 0.0607144 0.995425 0 50.9674 GTEX-YFC4-0011-R2a-SM-4V6DZ C1, A1 7.2 Brain Brain - Substantia nigra 0002038 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992714 693364 0.963679 0.993602 0.833707 24309 1 76 0.00244666 377 0 1.02515e+08 0.0360362 6.1439e+06 1.03175e+08 7.59386e+06 24333 5.10119e+07 0 0.129972 0.993602 0.828373 1.02515e+08 0.00297708 2.22923e+07 1.96947e+07 2.31049e+07 373 2.28414e+07 1.27771e+07 0.00271163 2.26416e+07 49.7804 0.0595482 0.994489 0 50.895 GTEX-YFC4-0011-R3a-SM-4RGLP C1, A1 8.8 Brain Brain - Anterior cingulate cortex (BA24) 0009835 595 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990915 1.1109e+06 0.955353 0.993568 0.834625 24433 1 76 0.00229795 372 0 9.8769e+07 0.0442066 3.44257e+06 9.94084e+07 8.637e+06 24453 4.91123e+07 0 0.120728 0.993568 0.829256 9.8769e+07 0.00298188 2.13415e+07 2.14444e+07 2.16067e+07 338 2.16252e+07 1.29727e+07 0.002639 2.15797e+07 49.9474 0.0346306 0.99622 0 50.3087 GTEX-YFC4-0011-R4a-SM-4RGLQ C1, A1 6.9 Brain Brain - Amygdala 0001876 595 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.989921 827314 0.960304 0.992768 0.827417 24600 1 76 0.00250849 371 0 9.46715e+07 0.0393828 7.25348e+06 9.53612e+07 8.45933e+06 24626 4.70659e+07 0 0.132887 0.992768 0.821432 9.46715e+07 0.00325201 2.03949e+07 2.55892e+07 2.08326e+07 351 2.06279e+07 1.00639e+07 0.00287918 2.084e+07 50.2558 0.0760632 0.995615 0 50.5308 GTEX-YFC4-0011-R5a-SM-4RGLR C1, A1 8.3 Brain Brain - Caudate (basal ganglia) 0001873 595 BP-40979 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990969 672367 0.963983 0.993176 0.816025 24631 1 76 0.00261153 371 0 1.07777e+08 0.0357658 8.97469e+06 1.08517e+08 9.36618e+06 24652 5.36318e+07 0 0.147958 0.993176 0.810457 1.07777e+08 0.00322499 2.31648e+07 3.58815e+07 2.38344e+07 363 2.36201e+07 9.85882e+06 0.00291758 2.35857e+07 49.9636 0.082703 0.995384 0 50.7123 GTEX-YFC4-0011-R6b-SM-4V6E1 C1, A1 7.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991569 562975 0.960614 0.992264 0.830258 24013 1 76 0.00252825 272 0 8.68924e+07 0.0391069 6.48182e+06 8.75699e+07 7.17220e+06 24038 4.3198e+07 0 0.130356 0.992264 0.823835 8.68924e+07 0.00302754 1.90498e+07 1.53408e+07 1.94726e+07 328 1.92204e+07 9.40687e+06 0.00277772 1.93568e+07 50.1768 0.0740188 0.992958 0 50.5489 GTEX-YFC4-0011-R7b-SM-4V6E2 C1, A1 7.9 Brain Brain - Putamen (basal ganglia) 0001874 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991806 733643 0.963077 0.992849 0.836884 23219 1 76 0.00258116 370 0 9.67396e+07 0.0366983 8.19475e+06 9.74364e+07 6.72869e+06 23242 4.81682e+07 0 0.126194 0.992849 0.830899 9.67396e+07 0.00300671 2.08936e+07 3.05343e+07 2.14751e+07 382 2.1152e+07 8.18501e+06 0.00279371 2.13084e+07 50.1842 0.0841036 0.993891 0 50.6862 GTEX-YFC4-0011-R8a-SM-4SOK3 C1, A1 7.4 Brain Brain - Hypothalamus 0001898 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989545 976813 0.948878 0.992257 0.825435 23589 1 76 0.00237224 203 0 7.2321e+07 0.050828 3.52466e+06 7.28853e+07 4.03342e+06 23608 3.59426e+07 0 0.123443 0.992257 0.819044 7.2321e+07 0.00292277 1.56074e+07 2.1777e+07 1.59192e+07 218 1.58006e+07 8.3515e+06 0.00264676 1.59232e+07 50.1931 0.048359 0.99497 0 50.4945 GTEX-YFC4-0011-R9a-SM-4SOK4 C1, A1 9.5 Brain Brain - Spinal cord (cervical c-1) 0006469 595 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.989044 1.1278e+06 0.948302 0.991948 0.782513 24539 1 76 0.00218486 209 0 8.23322e+07 0.051329 2.25954e+06 8.30005e+07 4.31845e+06 24568 4.08991e+07 0 0.165789 0.991948 0.776212 8.23322e+07 0.00287709 1.79086e+07 2.30632e+07 1.81013e+07 225 1.80352e+07 1.10306e+07 0.00252996 1.82317e+07 50.2709 0.0272232 0.994851 0 50.2677 GTEX-YFC4-0126-101855-SM-5CVLZ 0 C1 1 piece. Correlates perfectly with -0125 above. 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 688 1403 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 EXCLUDE 0.982028 244107 0.974564 0.987524 0.823012 23402 1 76 0.00493596 148 0 6.33989e+07 0.0251221 280416 6.41999e+07 1.27806e+07 23421 3.14021e+07 0 0.151552 0.987524 0.812744 6.33989e+07 0.00751464 1.37331e+07 7.87752e+06 1.37982e+07 132 1.39036e+07 1.16055e+07 0.00621812 1.39577e+07 50.0972 0.00436786 0.993018 0 50.1182 GTEX-YFC4-0126-SM-5CVLY 0 C1 1 piece. Correlates perfectly with -0125 above. 6.8 Skin Skin - Sun Exposed (Lower leg) 0004264 688 1403 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983433 254950 0.973083 0.987986 0.804451 23927 1 76 0.00505754 157 0 7.35207e+07 0.0266614 394245 7.44148e+07 1.39912e+07 23947 3.64503e+07 0 0.168632 0.987986 0.794787 7.35207e+07 0.00721893 1.59567e+07 9.26635e+06 1.60676e+07 151 1.61348e+07 1.24401e+07 0.00613325 1.62063e+07 50.1106 0.00529794 0.992539 0 50.1732 GTEX-YFC4-0226-SM-57WD2 0 C1 2 pieces, ~5% fibrous tissue, rep. areas delineated 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 691 1401 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991775 359010 0.97459 0.993734 0.792208 23752 1 76 0.00210236 209 0 8.84814e+07 0.0250962 511217 8.90393e+07 9.24901e+06 23786 4.40430e+07 0 0.182383 0.993734 0.787243 8.84814e+07 0.00349321 1.94977e+07 9.92176e+06 1.96139e+07 246 1.96423e+07 1.43039e+07 0.00279641 1.96336e+07 49.989 0.00574147 0.995693 0 50.1485 GTEX-YFC4-0326-SM-4TT3U 1 C1 6 pieces. Adherent serosa/vasa vasorum ~0.5mm thick on all 7.4 Blood Vessel Artery - Aorta 0001496 733 1360 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991048 356161 0.975803 0.992531 0.808653 23453 1 76 0.00248055 214 0 9.75442e+07 0.0237824 143150 9.82783e+07 8.60795e+06 23473 4.84733e+07 0 0.16715 0.992531 0.802613 9.75442e+07 0.00301351 2.12559e+07 1.03898e+07 2.12104e+07 253 2.12236e+07 1.82334e+07 0.00274663 2.13882e+07 50.1932 0.00145658 0.994013 0 49.9464 GTEX-YFC4-0426-SM-4TT3J 1 C1 2 pieces 7.4 Heart Heart - Atrial Appendage 0006631 736 1358 BP-41767 RNA Extraction from Paxgene-derived Lysate Plate Based 08/01/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.991531 556915 0.975501 0.993448 0.7813 23201 1 76 0.00246464 203 0 9.81673e+07 0.0242081 1.06605e+06 9.88147e+07 7.99083e+06 23236 4.88459e+07 0 0.194201 0.993448 0.776181 9.81673e+07 0.00308668 2.12293e+07 9.84474e+06 2.13345e+07 243 2.1384e+07 1.69573e+07 0.00277506 2.13562e+07 49.9675 0.0107884 0.995366 0 50.1236 GTEX-YFC4-0526-SM-5ZZVI 1 C1 2 pieces, minimal interstitial fibrosis 5.9 Heart Heart - Left Ventricle 0006566 739 1355 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994473 154101 0.978932 0.995615 0.819492 21585 1 76 0.00217493 196 0 7.49957e+07 0.0208998 2.7595e+06 7.5326e+07 7.00632e+06 21606 3.73959e+07 0 0.15944 0.995615 0.815898 7.49957e+07 0.00318149 1.66739e+07 1.10035e+07 1.67181e+07 216 1.67363e+07 1.05621e+07 0.00267763 1.67376e+07 50.0019 0.036634 0.996757 0 50.0662 GTEX-YFC4-0726-SM-62LF6 1 C1 2 pieces, one all vessel with minute adherent fat; one is 80% fat with minute section of vessel, delineated 6.5 Blood Vessel Artery - Coronary 0001621 749 1347 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5306 06/01/2014 TruSeq.v1 RNASEQ 0.986295 230798 0.976149 0.990403 0.784057 23719 1 76 0.00295128 167 0 7.94108e+07 0.0235383 878002 8.01803e+07 5.47506e+06 23751 3.94298e+07 0 0.192092 0.990403 0.776533 7.94108e+07 0.00374596 1.76024e+07 1.14826e+07 1.76505e+07 192 1.76875e+07 1.19287e+07 0.00334697 1.78736e+07 50.2617 0.0109503 0.994512 0 50.0682 GTEX-YFC4-0826-SM-5CVM1 0 C1 2 pieces, excellent specimen, mere trace of adherent fat on one, delineated 6.2 Nerve Nerve - Tibial 0001323 750 1346 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983795 217605 0.96747 0.987397 0.758473 23832 1 76 0.00498623 139 0 6.43332e+07 0.0322208 181763 6.51544e+07 1.16079e+07 23863 3.19176e+07 0 0.208997 0.987397 0.748914 6.43332e+07 0.00711313 1.40761e+07 6.97051e+06 1.41813e+07 128 1.42159e+07 1.03799e+07 0.0060458 1.42635e+07 50.0836 0.00278973 0.990999 0 50.1861 GTEX-YFC4-0926-SM-5S2U7 0 C1 2 pieces, perfect clean specimens, not atherosis noted 7 Blood Vessel Artery - Tibial 0007610 752 1345 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4996 04/03/2014 TruSeq.v1 RNASEQ 0.992396 204832 0.976843 0.994159 0.840734 21058 1 76 0.00186753 162 0 7.30385e+07 0.0227285 285959 7.34676e+07 6.75650e+06 21081 3.63458e+07 0 0.136109 0.994159 0.835824 7.30385e+07 0.00303811 1.5708e+07 5.97531e+06 1.58236e+07 175 1.57688e+07 1.46292e+07 0.00245178 1.58928e+07 50.1959 0.00389231 0.995923 0 50.1832 GTEX-YFC4-1026-SM-5RQJM 0 C1 2 pieces, adherent nubbin of fat/vessel up to 1.5mm on one, delineated 8.2 Muscle Muscle - Skeletal 0011907 760 1337 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.993873 180097 0.983428 0.994962 0.867296 19440 1 76 0.00191784 201 0 8.21446e+07 0.0163339 1.05696e+06 8.25606e+07 4.04178e+06 19453 4.09491e+07 0 0.116132 0.994962 0.862927 8.21446e+07 0.00259107 1.80226e+07 7.60325e+06 1.80652e+07 205 1.81091e+07 1.87397e+07 0.00225409 1.8061e+07 49.9334 0.0128023 0.99605 0 50.059 GTEX-YFC4-1126-SM-5RQJN 1 C1 2 pieces, prominent centeral vessels in one, delineated. Both with moderate alveolar congestion/edema 8.2 Lung Lung 0008952 763 1335 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.990801 133237 0.974868 0.991848 0.697809 23604 1 76 0.0023975 157 0 7.77133e+07 0.0248345 204718 7.83521e+07 3.8322e+06 23645 3.86604e+07 0 0.277059 0.991848 0.692121 7.77133e+07 0.00307556 1.73631e+07 1.10736e+07 1.74264e+07 166 1.74351e+07 1.07982e+07 0.00273617 1.74378e+07 50.0038 0.0026128 0.992895 0 50.0909 GTEX-YFC4-1226-SM-5LU9R 1 C1 1 piece. Correlates perfectly with-1225 6.2 Esophagus Esophagus - Mucosa 0006920 766 1332 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991215 262525 0.976752 0.993158 0.803453 20878 1 76 0.00454859 123 0 6.1196e+07 0.0230407 255392 6.16177e+07 5.45296e+06 20892 3.04357e+07 0 0.173298 0.993158 0.797956 6.1196e+07 0.00382308 1.38057e+07 9.02448e+06 1.38975e+07 140 1.38971e+07 1.00597e+07 0.00418654 1.39313e+07 50.0614 0.00414479 0.9951 0 50.1656 GTEX-YFC4-1426-SM-5IFJG 1 C1 2 pieces, TDLU's present, fibrocystic changd and duct ectasia, rep areas delineated. Some foci with modereate autolysis, approaching score 2 6.8 Breast Breast - Mammary Tissue 0008367 770 1335 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.987922 262986 0.966181 0.990108 0.680573 26286 1 76 0.00339003 171 0 9.36789e+07 0.0335069 191275 9.46148e+07 7.30305e+06 26343 4.65767e+07 0 0.285608 0.990108 0.673841 9.36789e+07 0.004097 2.05776e+07 9.7481e+06 2.06924e+07 178 2.07445e+07 1.42439e+07 0.00374273 2.07226e+07 49.9736 0.00202162 0.992295 0 50.1391 GTEX-YFC4-1526-SM-5IFJS 2 C1 2 pieces, minimal steatosis, moderate autolysis 6 Liver Liver 0001114 772 1334 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988477 234757 0.9724 0.990334 0.812854 21101 1 76 0.00323511 200 0 8.19129e+07 0.0274217 925831 8.27124e+07 6.18867e+06 21121 4.07733e+07 0 0.159546 0.990334 0.804997 8.19129e+07 0.0039517 1.79412e+07 1.34618e+07 1.80845e+07 215 1.8055e+07 1.16149e+07 0.00359273 1.81081e+07 50.0734 0.0111934 0.992191 0 50.1989 GTEX-YFC4-2126-SM-EXURK 1 C1 6 pieces, all muscularis, excellent specimens 5.6 Esophagus Esophagus - Gastroesophageal Junction 0004550 820 1290 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.983788 339236 0.963896 0.985223 0.763309 22437 1 76 0.00234473 130 0 6.07762e+07 0.0358899 904928 6.16878e+07 2.42449e+06 22468 3.02319e+07 0 0.200586 0.985223 0.75203 6.07762e+07 0.00298842 1.31318e+07 7.11605e+06 1.3329e+07 148 1.33048e+07 8.24892e+06 0.00266611 1.32407e+07 49.8792 0.0146695 0.986659 0 50.3728 GTEX-YFC4-2626-SM-5P9FQ 1 C1 2 pieces. Late stage Hashimoto's thyroiditis with regressive/fibrotic changes, prominent lymphoid follicles, rep ones delineated 6.6 Thyroid Thyroid 0002046 834 1279 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.988537 470706 0.953869 0.988574 0.696386 27567 1 76 0.00383063 276 0 1.2735e+08 0.0442615 363790 1.28822e+08 4.67553e+06 27631 6.31919e+07 0 0.257483 0.988574 0.688428 1.2735e+08 0.00451825 2.77316e+07 2.28914e+07 2.78426e+07 321 2.77957e+07 1.78978e+07 0.00417442 2.77991e+07 50.0031 0.00282398 0.98861 0 50.0998 GTEX-YFC4-2726-SM-5IFJW 2 C1 2 pieces, typical post menopopausal appearance, unremarkable 7 Ovary Ovary 0000992 836 1278 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989083 187208 0.963165 0.990973 0.726911 23600 1 76 0.0032286 149 0 7.66918e+07 0.0365927 88629 7.73904e+07 5.8657e+06 23639 3.81603e+07 0 0.236255 0.990973 0.720349 7.66918e+07 0.00385251 1.66342e+07 9.2672e+06 1.67655e+07 150 1.67716e+07 1.39293e+07 0.00353996 1.67682e+07 49.995 0.00114522 0.992862 0 50.1966 GTEX-YFC4-2826-SM-5P9FR 1 C1 2 pieces, 97% myometrium, a few mintue 5mm foci of autolyzed endometrial stroma; no viable glands 5.9 Uterus Uterus 0000995 839 1275 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.985941 376361 0.963534 0.983825 0.719497 25583 1 76 0.00333522 375 0 1.2064e+08 0.0362142 409778 1.22623e+08 6.09152e+06 25642 5.97551e+07 0 0.244037 0.983825 0.707859 1.2064e+08 0.00412645 2.6382e+07 1.38306e+07 2.64013e+07 344 2.62054e+07 1.60353e+07 0.00373169 2.63548e+07 50.1421 0.00334176 0.981708 0 50.0183 GTEX-YFC4-2926-SM-5IFJ8 2 C1 6 pieces, 99% stroma, trace sloughing autolyzed squamous mucosa 7.1 Vagina Vagina 0000996 841 1274 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.986468 177478 0.965966 0.988887 0.689636 23235 1 76 0.00339202 115 0 6.19904e+07 0.0337543 43687 6.2687e+07 4.54169e+06 23261 3.08051e+07 0 0.27633 0.988887 0.681973 6.19904e+07 0.00414944 1.35296e+07 6.0043e+06 1.35999e+07 119 1.36122e+07 9.40316e+06 0.0037698 1.36648e+07 50.0965 0.000696907 0.991306 0 50.1295 GTEX-YFC4-3026-SM-5IFJK 1 C1 4 pieces, Purkinje layer with minimal hypoxic change 7 Brain Brain - Cerebellum 0002037 857 1258 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989236 345030 0.94204 0.991032 0.691412 24323 1 76 0.00351015 129 0 7.59903e+07 0.0576901 1.32288e+06 7.66779e+07 5.64216e+06 24352 3.78036e+07 0 0.250628 0.991032 0.685211 7.59903e+07 0.00416754 1.63218e+07 1.61703e+07 1.64718e+07 159 1.64797e+07 8.4213e+06 0.00383825 1.64424e+07 49.9433 0.0172524 0.992828 0 50.2286 GTEX-YFC4-3126-SM-5PNV6 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 858 1258 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993391 260689 0.963501 0.994834 0.814066 23459 1 76 0.00217335 201 0 7.14648e+07 0.0360809 2.53321e+06 7.18359e+07 6.50933e+06 23479 3.56007e+07 0 0.149435 0.994834 0.80986 7.14648e+07 0.00314246 1.56293e+07 1.13831e+07 1.57865e+07 212 1.57505e+07 9.10312e+06 0.00265721 1.57556e+07 50.0081 0.0352639 0.996276 0 50.2502 GTEX-YFC4-3226-SM-5CVM2 2 C1 1 pieces; ~10% of specimen is neurohypophysis; rest is adenohypophysis 6.4 Pituitary Pituitary 0000007 859 1258 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985981 291467 0.962608 0.989397 0.772081 25592 1 76 0.00496282 131 0 7.20081e+07 0.0371521 464107 7.27798e+07 1.33465e+07 25629 3.57406e+07 0 0.190527 0.989397 0.763895 7.20081e+07 0.00702828 1.49419e+07 8.41761e+06 1.50786e+07 144 1.51278e+07 1.14795e+07 0.00599198 1.51207e+07 49.9883 0.00637687 0.992813 0 50.2277 GTEX-YFCO-0001-SM-4YUWM B1 Blood Whole Blood 0013756 -96 BP-34874 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YFCO-0001-SM-53IV9 B1 Blood Whole Blood 0013756 -96 BP-34874 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-YFCO-0001-SM-6UH34 B1 Blood Whole Blood 0013756 -96 BP-34874 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/07/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-YFCO-0003-SM-4W21I B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -96 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988977 1.72199e+06 0.949447 0.990215 0.834233 22636 1 76 0.00404414 388 0 1.52814e+08 0.0500894 1.26783e+06 1.54324e+08 5.20829e+06 22668 7.60048e+07 0 0.115214 0.990215 0.82607 1.52814e+08 0.00460093 3.28333e+07 5.89124e+07 3.34874e+07 373 3.33585e+07 2.88169e+07 0.00432219 3.31883e+07 49.8721 0.00821534 0.991453 0 50.4931 GTEX-YFCO-0005-SM-4W1ZI B1 9.1 Blood Whole Blood 0013756 -96 BP-34881 RNA isolation_PAXgene Blood RNA (Manual) 01/07/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.980853 5.0595e+06 0.862843 0.982036 0.690698 20557 1 76 0.00396994 273 0 1.3587e+08 0.136056 765313 1.38356e+08 4.65703e+06 20580 6.75404e+07 0 0.172145 0.982036 0.67829 1.3587e+08 0.00473931 2.65751e+07 2.11063e+08 2.7219e+07 295 2.72859e+07 2.20236e+07 0.00435416 2.68009e+07 49.5516 0.00553149 0.983218 0 50.5985 GTEX-YFCO-0008-SM-4W1Z4 B1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 208 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989221 1.34337e+06 0.954499 0.990124 0.857397 22012 1 76 0.0038823 380 0 1.23234e+08 0.0453139 607928 1.24463e+08 4.51473e+06 22032 6.12912e+07 0 0.0971018 0.990124 0.848929 1.23234e+08 0.00434621 2.6527e+07 3.82445e+07 2.68062e+07 342 2.67043e+07 1.83405e+07 0.00411404 2.67634e+07 50.0553 0.00488441 0.991026 0 50.2617 GTEX-YFCO-0126-SM-4W1YT 1 B1 4 pieces; 3 with attached adipose tissue (up to 30% of submitted tissue) 7.5 Adrenal Gland Adrenal Gland 0002369 93 491 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.989337 928489 0.963007 0.990403 0.829584 23931 1 76 0.00369798 371 0 1.22368e+08 0.0367509 2.88671e+06 1.23553e+08 4.37526e+06 23958 6.08647e+07 0 0.133423 0.990403 0.821622 1.22368e+08 0.00439915 2.65887e+07 3.29157e+07 2.68012e+07 379 2.67674e+07 1.53739e+07 0.00404819 2.67664e+07 49.9991 0.0233641 0.991469 0 50.199 GTEX-YFCO-0326-SM-4W1ZP 0 B1 2 pieces 7 Thyroid Thyroid 0002046 106 478 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.987328 1.25688e+06 0.943867 0.988105 0.77099 24790 1 76 0.00364934 376 0 1.18556e+08 0.055895 910469 1.19984e+08 4.87696e+06 24831 5.89186e+07 0 0.172876 0.988105 0.761819 1.18556e+08 0.00434119 2.52863e+07 4.22532e+07 2.55016e+07 354 2.54376e+07 1.57586e+07 0.00399499 2.54641e+07 50.0261 0.00758827 0.988881 0 50.2119 GTEX-YFCO-0426-SM-4W1Z7 0 B1 2 pieces; some emphysematous change and atelectasis 8.7 Lung Lung 0008952 110 474 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.98903 757616 0.959588 0.990133 0.811465 24994 1 76 0.00363864 272 0 1.02501e+08 0.040007 671873 1.03522e+08 3.5232e+06 25022 5.09906e+07 0 0.148124 0.990133 0.803458 1.02501e+08 0.00433429 2.22524e+07 2.26649e+07 2.25407e+07 297 2.25135e+07 1.70103e+07 0.00398608 2.24033e+07 49.8773 0.00649013 0.991237 0 50.3218 GTEX-YFCO-0526-SM-4W1ZJ 1 B1 6 pieces; relatively well-trimmed with small focus of mucous glands 8.8 Esophagus Esophagus - Muscularis 0004648 117 467 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.990458 689098 0.965011 0.991338 0.848861 23348 1 76 0.00344127 374 0 1.19175e+08 0.0347512 1.11987e+06 1.20217e+08 4.17289e+06 23367 5.93094e+07 0 0.11615 0.991338 0.841508 1.19175e+08 0.00402794 2.52764e+07 2.18368e+07 2.55836e+07 347 2.546e+07 1.83695e+07 0.00373434 2.55062e+07 50.0454 0.00931545 0.992219 0 50.302 GTEX-YFCO-0726-SM-5ZZVJ 0 B1 6 pieces; good specimens, muscularis only 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 122 462 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5305 05/26/2014 TruSeq.v1 RNASEQ 0.994642 191654 0.9721 0.995748 0.823457 22819 1 76 0.00207515 209 0 7.85452e+07 0.0275964 648370 7.88806e+07 6.37074e+06 22836 3.91598e+07 0 0.148643 0.995748 0.819956 7.85452e+07 0.0031458 1.70405e+07 8.97365e+06 1.72333e+07 216 1.71454e+07 1.27876e+07 0.00260988 1.72104e+07 50.0945 0.00821964 0.996854 0 50.2812 GTEX-YFCO-0826-SM-5LUAG 1 B1 6 pieces; mucosa and submucosa 6.5 Stomach Stomach 0000945 126 458 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.983624 208356 0.980778 0.986167 0.851894 21586 1 76 0.00457148 253 0 6.36365e+07 0.018608 534939 6.45292e+07 5.568e+06 21601 3.16115e+07 0 0.128884 0.986167 0.84011 6.36365e+07 0.00398784 1.46266e+07 6.6422e+07 1.47824e+07 171 1.47985e+07 1.63353e+07 0.00428042 1.47724e+07 49.9558 0.00828988 0.98871 0 50.2649 GTEX-YFCO-0926-SM-5LUA5 1 B1 2 pieces; congested 6.9 Spleen Spleen 0002106 130 454 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988581 332561 0.961229 0.990486 0.781334 23552 1 76 0.00549466 124 0 6.51273e+07 0.0365786 432073 6.57529e+07 5.40835e+06 23578 3.22995e+07 0 0.179895 0.990486 0.773901 6.51273e+07 0.00469967 1.43154e+07 1.06108e+07 1.43427e+07 142 1.43527e+07 9.45427e+06 0.00509793 1.44315e+07 50.1369 0.00657117 0.992392 0 50.0477 GTEX-YFCO-1026-SM-5LU9S 1 B1 2 pieces; approximately 10% fat (internal and attached); 7.6 Pancreas Pancreas 0001150 135 449 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.992361 237069 0.980091 0.994066 0.873131 20450 1 76 0.00470259 96 0 5.92254e+07 0.0195721 127367 5.9579e+07 5.00163e+06 20458 2.94743e+07 0 0.106959 0.994066 0.867951 5.92254e+07 0.00390668 1.36735e+07 1.77857e+07 1.37585e+07 107 1.37219e+07 1.81609e+07 0.00430532 1.38132e+07 50.1659 0.00213779 0.995772 0 50.1548 GTEX-YFCO-1126-SM-5S2N9 1 B1 2 pieces; central hole in one piece; few small vessels. 8.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 137 447 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99333 301335 0.976843 0.994799 0.837919 21559 1 76 0.00174917 133 0 5.54816e+07 0.0228052 268807 5.57717e+07 3.796e+06 21573 2.76063e+07 0 0.138924 0.994799 0.833561 5.54816e+07 0.00270841 1.22012e+07 4.37609e+06 1.23314e+07 142 1.22691e+07 1.02783e+07 0.00222808 1.23445e+07 50.1532 0.00481978 0.996268 0 50.2654 GTEX-YFCO-1226-SM-5LUAT 0 B1 6 pieces; well-trimmed. Squamous epithelium is ~ 1% of thickness. Dermatophytes identified. 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 140 444 BP-41808 RNA Extraction from Paxgene-derived Lysate Plate Based 08/02/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.991218 461281 0.967234 0.993265 0.830006 22175 1 76 0.00459531 160 0 7.02215e+07 0.0325881 682780 7.06977e+07 6.38628e+06 22191 3.49273e+07 0 0.137227 0.993265 0.824416 7.02215e+07 0.00379583 1.52955e+07 1.28819e+07 1.53928e+07 169 1.53302e+07 1.08052e+07 0.00419639 1.55083e+07 50.2888 0.00965774 0.995312 0 50.1585 GTEX-YFCO-1326-SM-664NV 1 B1 6 pieces; muscularis propria present in several pieces (not target); lymphoid elements prominent in several pieces (marked). 6.2 Small Intestine Small Intestine - Terminal Ileum 0001211 152 432 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5303 06/24/2014 TruSeq.v1 RNASEQ 0.991523 260848 0.974705 0.992248 0.818583 24674 1 76 0.00265853 392 0 1.21388e+08 0.0246958 877870 1.22336e+08 7.96406e+06 24714 6.04481e+07 0 0.156122 0.992248 0.812238 1.21388e+08 0.00335145 2.69273e+07 1.73758e+07 2.7256e+07 334 2.70635e+07 2.03353e+07 0.00300474 2.71943e+07 50.1205 0.00717588 0.992974 0 50.3034 GTEX-YFCO-1526-SM-5YYB8 1 B1 6 pieces; 3 with small regions of residual mucosa (not fully trimmed). 5.7 Colon Colon - Sigmoid 0001159 163 421 BP-49387 RNA Extraction from Paxgene-derived Lysate Plate Based 02/11/2014 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.992099 206621 0.974278 0.993385 0.832709 23363 1 76 0.00257578 284 0 1.08757e+08 0.0254409 580552 1.09481e+08 4.88719e+06 23389 5.41647e+07 0 0.14157 0.993385 0.8272 1.08757e+08 0.00314335 2.35075e+07 9.7612e+06 2.37382e+07 327 2.3657e+07 1.87458e+07 0.0028592 2.37195e+07 50.066 0.00530276 0.99467 0 50.2441 GTEX-YFCO-1626-SM-4W1Z3 1 B1 2 pieces; few foci of chronic inflammation; glands cover ~50% of the total specimen 7.8 Prostate Prostate 0002367 172 412 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 EXCLUDE 0.990714 478029 0.97242 0.99169 0.854705 24262 1 76 0.00325524 375 0 1.20204e+08 0.0273205 1.01402e+06 1.21212e+08 4.21415e+06 24282 5.97988e+07 0 0.117715 0.99169 0.847602 1.20204e+08 0.00396745 2.60041e+07 1.39244e+07 2.62615e+07 358 2.62131e+07 2.24203e+07 0.00361099 2.61742e+07 49.9629 0.00836569 0.992666 0 50.2462 GTEX-YFCO-1726-SM-4W21S 1 B1 2 pieces; spermatogenesis. 7.1 Testis Testis 0000473 179 405 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.988334 808829 0.933603 0.989327 0.768861 34612 1 76 0.00357595 380 0 1.34247e+08 0.0661162 1.51318e+06 1.35695e+08 4.69288e+06 34687 6.67929e+07 0 0.164742 0.989327 0.760655 1.34247e+08 0.00419354 2.83054e+07 2.56164e+07 2.85686e+07 356 2.85379e+07 1.9922e+07 0.00388444 2.84663e+07 49.9372 0.0111513 0.990319 0 50.2314 GTEX-YFCO-1826-SM-4W1YH 1 B1 2 pieces; one piece fatty with large central cavity, second piece with ~30% fibrous tissue. No ductal elements. 7.2 Breast Breast - Mammary Tissue 0008367 185 399 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.99119 477478 0.970659 0.992143 0.800442 24967 1 76 0.00315792 380 0 1.26644e+08 0.0290481 416014 1.27647e+08 3.8203e+06 25012 6.30496e+07 0 0.170218 0.992143 0.794152 1.26644e+08 0.00372882 2.76293e+07 1.46781e+07 2.79001e+07 339 2.78562e+07 2.16838e+07 0.0034431 2.77933e+07 49.9435 0.00325911 0.993095 0 50.2439 GTEX-YFCO-1926-SM-4W212 1 B1 2 pieces; <10% adipose tissue (attached and internal). 8.4 Muscle Muscle - Skeletal 0011907 204 380 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.991542 878075 0.9688 0.992674 0.866717 20554 1 76 0.00328531 383 0 1.15808e+08 0.0309813 2.11247e+06 1.16663e+08 3.71957e+06 20564 5.76761e+07 0 0.102082 0.992674 0.860368 1.15808e+08 0.00389987 2.47999e+07 3.14967e+07 2.51761e+07 340 2.51208e+07 2.08537e+07 0.00359224 2.49857e+07 49.8652 0.0181074 0.993807 0 50.3764 GTEX-YFCO-2026-SM-4W21Q 1 B1 2 pieces; central holes in both; 5-10% fibrous tissue. 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 208 376 BP-42185 RNA Extraction from Paxgene-derived Lysate Plate Based 08/12/2013 LCSET-4049 10/20/2013 TruSeq.v1 RNASEQ 0.990341 438323 0.975417 0.991344 0.821247 25101 1 76 0.00326199 378 0 1.31642e+08 0.0242487 363078 1.32791e+08 4.60815e+06 25136 6.54957e+07 0 0.15417 0.991344 0.814139 1.31642e+08 0.00394478 2.89011e+07 1.25426e+07 2.90892e+07 362 2.90613e+07 2.35351e+07 0.00360304 2.90607e+07 49.9995 0.00273421 0.992347 0 50.1621 GTEX-YJ89-0002-SM-4YUVL C1 Blood Whole Blood 0013756 1036 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YJ89-0002-SM-53IUO C1 Blood Whole Blood 0013756 1036 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-YJ89-0002-SM-6UH1H C1 Blood Whole Blood 0013756 1036 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YJ89-0008-SM-4RGM4 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1136 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.992937 781700 0.978377 0.994767 0.871012 20946 1 76 0.00189283 225 0 9.47683e+07 0.021282 407777 9.52669e+07 8.10076e+06 20960 4.71839e+07 0 0.107364 0.994767 0.866454 9.47683e+07 0.0024588 2.12057e+07 1.44648e+07 2.13926e+07 217 2.14588e+07 2.54807e+07 0.0021753 2.13234e+07 49.8418 0.00428037 0.996597 0 50.2194 GTEX-YJ89-0011-R10a-SM-4SOK9 C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.992084 734966 0.950131 0.994142 0.838506 22222 1 76 0.0021831 145 0 5.78038e+07 0.0494055 2.61e+06 5.81444e+07 3.03644e+06 22236 2.87499e+07 0 0.111625 0.994142 0.833594 5.78038e+07 0.00280077 1.25122e+07 1.58463e+07 1.26128e+07 168 1.25745e+07 7.25233e+06 0.0024913 1.26762e+07 50.2014 0.0448882 0.9962 0 50.2002 GTEX-YJ89-0011-R10a-SM-AHZO2 C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1040 ChIP-Seq GTEX-YJ89-0011-R10a-SM-CYKPS C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 RIP-Seq GTEX-YJ89-0011-R11a-SM-4SOKA C1, A1 7.9 Brain Brain - Cerebellar Hemisphere 0002037 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.990732 842019 0.940867 0.992892 0.743148 23231 1 76 0.00222381 205 0 8.38106e+07 0.058782 1.45281e+06 8.44107e+07 4.32421e+06 23258 4.16708e+07 0 0.197719 0.992892 0.737866 8.38106e+07 0.00280668 1.78932e+07 1.88525e+07 1.8073e+07 220 1.80766e+07 1.00595e+07 0.00251461 1.80703e+07 49.9913 0.0172112 0.995051 0 50.2499 GTEX-YJ89-0011-R1a-SM-4RGLS C1, A1 8 Brain Brain - Hippocampus 0001954 1040 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.989903 530124 0.973406 0.992508 0.845523 22155 1 76 0.00266756 367 0 9.24952e+07 0.0264569 9.67207e+06 9.31934e+07 8.15188e+06 22167 4.59858e+07 0 0.127883 0.992508 0.839188 9.24952e+07 0.00358096 2.00382e+07 3.88174e+07 2.05096e+07 407 2.02688e+07 5.01365e+06 0.00312306 2.05033e+07 50.2875 0.103785 0.995113 0 50.5814 GTEX-YJ89-0011-R2b-SM-4RGLT C1, A1 6.2 Brain Brain - Substantia nigra 0002038 1040 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.988869 588586 0.972674 0.991657 0.843849 22595 1 76 0.00264778 523 0 1.2935e+08 0.0272022 1.80155e+07 1.30438e+08 1.08326e+07 22610 6.43263e+07 0 0.128825 0.991657 0.836809 1.2935e+08 0.00359862 2.77793e+07 5.08453e+07 2.90456e+07 452 2.82918e+07 8.81231e+06 0.00312186 2.88187e+07 50.4613 0.138115 0.994445 0 51.1141 GTEX-YJ89-0011-R3b-SM-4V6EF C1, A1 8.5 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1040 BP-40981 RNA isolation_PAXgene Tissue miRNA 07/18/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.993725 886598 0.959748 0.994656 0.848177 24508 1 76 0.00235213 372 0 1.16173e+08 0.0399335 7.1196e+06 1.16797e+08 7.91092e+06 24527 5.78746e+07 0 0.111571 0.994656 0.843644 1.16173e+08 0.00271499 2.49169e+07 2.92556e+07 2.58541e+07 374 2.55833e+07 1.19199e+07 0.00253339 2.52894e+07 49.7112 0.0609572 0.995588 0 50.923 GTEX-YJ89-0011-R5a-SM-4V6GM C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992944 680574 0.964039 0.994069 0.841651 22646 1 76 0.00254521 369 0 9.7345e+07 0.0358178 1.0514e+07 9.79258e+07 6.94716e+06 22661 4.84611e+07 0 0.122387 0.994069 0.836659 9.7345e+07 0.0029738 2.07345e+07 3.66436e+07 2.16556e+07 386 2.13206e+07 6.37245e+06 0.00275927 2.11873e+07 49.8432 0.107367 0.995194 0 51.0865 GTEX-YJ89-0011-R6a-SM-4V6GN C1, A1 7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.991351 948341 0.954344 0.992587 0.826042 24855 1 76 0.00248381 375 0 1.01078e+08 0.0453828 8.1514e+06 1.01833e+08 7.56509e+06 24879 5.02727e+07 0 0.128301 0.992587 0.819919 1.01078e+08 0.00298073 2.17299e+07 2.71427e+07 2.25131e+07 384 2.22968e+07 1.0306e+07 0.00273196 2.20772e+07 49.7526 0.0800466 0.993822 0 50.8852 GTEX-YJ89-0011-R7a-SM-4V6GO C1, A1 7.3 Brain Brain - Putamen (basal ganglia) 0001874 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-4035 10/13/2013 TruSeq.v1 RNASEQ 0.992981 803149 0.963723 0.994015 0.840897 22919 1 76 0.00252332 370 0 1.06538e+08 0.0361259 1.19468e+07 1.0718e+08 7.353e+06 22931 5.3037e+07 0 0.122827 0.994015 0.835864 1.06538e+08 0.00293749 2.22625e+07 4.24306e+07 2.40722e+07 398 2.35252e+07 7.32064e+06 0.00273019 2.28895e+07 49.3152 0.111465 0.995049 0 51.9528 GTEX-YJ89-0011-R8b-SM-4SOK8 C1, A1 7.1 Brain Brain - Hypothalamus 0001898 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.989295 897180 0.946416 0.991989 0.807725 24056 1 76 0.00226689 206 0 7.55501e+07 0.0533592 6.03876e+06 7.61603e+07 3.42991e+06 24077 3.75192e+07 0 0.138692 0.991989 0.801254 7.55501e+07 0.00294719 1.62533e+07 2.7532e+07 1.649e+07 247 1.63026e+07 6.82986e+06 0.00260611 1.66177e+07 50.4786 0.0792902 0.994682 0 50.3615 GTEX-YJ89-0011-R9a-SM-4SOK7 C1, A1 6.8 Brain Brain - Spinal cord (cervical c-1) 0006469 1040 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988205 930378 0.946679 0.991071 0.803991 23468 1 76 0.00228691 231 0 8.4479e+07 0.0530171 3.24993e+06 8.52401e+07 4.87479e+06 23490 4.1977e+07 0 0.142688 0.991071 0.796812 8.4479e+07 0.00289391 1.82925e+07 1.99674e+07 1.88051e+07 249 1.85598e+07 1.11854e+07 0.00258953 1.87817e+07 50.2972 0.0381268 0.993937 0 50.6909 GTEX-YJ89-0126-SM-4TT3X 1 C1 6 pieces; residual adipose tissue comprises ~5-10%; squamous epithelium is 1.5-3% of thickness. 7.9 Skin Skin - Sun Exposed (Lower leg) 0004264 1135 1439 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.990259 535932 0.966749 0.992167 0.777678 24105 1 76 0.00263043 290 0 1.02427e+08 0.0329967 418163 1.03236e+08 8.77792e+06 24155 5.09255e+07 0 0.18907 0.992167 0.771586 1.02427e+08 0.00330296 2.22426e+07 1.7216e+07 2.21766e+07 261 2.21935e+07 1.70009e+07 0.00296605 2.24182e+07 50.2519 0.00405055 0.994074 0 49.9258 GTEX-YJ89-0226-SM-4TT3Y 1 C1 2 pieces; approximately 20% fibrovascular tissue and nerve present 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 1139 1437 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.990221 411570 0.975487 0.992042 0.786596 23923 1 76 0.00263418 277 0 9.87428e+07 0.024211 797918 9.95348e+07 8.41327e+06 23958 4.90812e+07 0 0.188891 0.992042 0.780337 9.87428e+07 0.00328617 2.18983e+07 1.22391e+07 2.19181e+07 275 2.19202e+07 1.50847e+07 0.00295958 2.20671e+07 50.1669 0.00801647 0.993863 0 50.0227 GTEX-YJ89-0526-SM-CYKQA 0 C1 2 pieces, with tendon and several large vessels attached (encompasses ~10% of tissue). Medial calcific sclerosis of vessels. Patchy atrophy of skeletal muscle. 7.2 Muscle Muscle - Skeletal 0011907 1146 1431 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 RIP-Seq GTEX-YJ89-0626-SM-4TT3Z 1 C1 2 pieces; spermatogenesis present, medial calcific sclerosis in one vessel 6 Testis Testis 0000473 1156 1422 BP-41973 RNA Extraction from Paxgene-derived Lysate Plate Based 08/06/2013 LCSET-4014 10/06/2013 TruSeq.v1 RNASEQ 0.989092 725923 0.934339 0.991145 0.720958 33652 1 76 0.00261507 201 0 9.45798e+07 0.0653852 1.13488e+06 9.54248e+07 7.94795e+06 33727 4.69978e+07 0 0.213382 0.991145 0.714574 9.45798e+07 0.00334582 2.00164e+07 1.1468e+07 1.99985e+07 204 2.00453e+07 1.42073e+07 0.00297969 2.01482e+07 50.128 0.011893 0.993198 0 49.9776 GTEX-YJ89-0726-SM-5P9F7 1 C1 2 pieces; patchy areas of lymphocytic or Hashimoto's thyroiditis 5.7 Thyroid Thyroid 0002046 1162 1416 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.987231 290910 0.963571 0.986908 0.752238 26515 1 76 0.00335464 211 0 1.05118e+08 0.0358943 489594 1.06512e+08 3.98749e+06 26569 5.21921e+07 0 0.211332 0.986908 0.74239 1.05118e+08 0.00420203 2.29981e+07 1.30909e+07 2.31088e+07 249 2.30296e+07 1.58217e+07 0.00377848 2.30613e+07 50.0344 0.0045966 0.986585 0 50.1201 GTEX-YJ89-1526-SM-5P9IR 1 C1 6 pieces; numerous dilated vessels within submucosa 5.9 Esophagus Esophagus - Mucosa 0006920 1180 1404 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991935 259757 0.968567 0.992352 0.792506 23641 1 76 0.00333586 267 0 9.69398e+07 0.0312479 1.63226e+06 9.76869e+07 3.33761e+06 23667 4.82801e+07 0 0.176062 0.992352 0.786445 9.69398e+07 0.0037599 2.16073e+07 1.35365e+07 2.18598e+07 324 2.17127e+07 1.15444e+07 0.00354779 2.17987e+07 50.0989 0.016709 0.992768 0 50.2905 GTEX-YJ89-1926-SM-5IFJ6 1 C1 2 pieces; ~40% fibrovascular tissue with several prominent vessels 6.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1195 1391 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.982771 201882 0.977121 0.98505 0.797483 22745 1 76 0.00329297 148 0 6.67152e+07 0.0225764 908073 6.77277e+07 4.96814e+06 22764 3.31439e+07 0 0.179638 0.98505 0.78556 6.67152e+07 0.00432552 1.47443e+07 9.23074e+06 1.48264e+07 157 1.48223e+07 1.09562e+07 0.00380805 1.48999e+07 50.1305 0.0134077 0.987329 0 50.139 GTEX-YJ89-2926-SM-5P9IT 1 C1 4 pieces; Purkinje cells well-visualized with some autolytic neuronal condensation 7 Brain Brain - Cerebellum 0002037 1223 1370 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99045 431255 0.952295 0.991217 0.732855 25176 1 76 0.00349811 272 0 1.27447e+08 0.0473192 1.95682e+06 1.28576e+08 4.06619e+06 25228 6.34579e+07 0 0.21944 0.991217 0.726419 1.27447e+08 0.003836 2.77272e+07 1.56396e+07 2.78203e+07 316 2.77658e+07 1.5724e+07 0.00366692 2.78676e+07 50.0915 0.0152192 0.991984 0 50.0837 GTEX-YJ89-3026-SM-5IFJI 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 1225 1368 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990726 311885 0.964917 0.992649 0.840022 23610 1 76 0.00326011 267 0 8.43251e+07 0.0347718 4.05523e+06 8.49496e+07 6.60378e+06 23624 4.19829e+07 0 0.124895 0.992649 0.833848 8.43251e+07 0.00398928 1.84065e+07 1.82266e+07 1.86191e+07 272 1.85163e+07 9.40613e+06 0.00362399 1.86585e+07 50.1913 0.0477369 0.994573 0 50.2871 GTEX-YJ8A-0002-SM-4YUUZ B1 Blood Whole Blood 0013756 -13 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-YJ8A-0002-SM-53UB6 B1 Blood Whole Blood 0013756 -13 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-YJ8A-0002-SM-6UH3B B1 Blood Whole Blood 0013756 -13 BP-34965 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/10/2013 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-YJ8A-0426-SM-5IFID 0 B1 6 pieces; too much subcutaneous fat on 4 of 6 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 211 479 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.990104 161319 0.975559 0.991803 0.800178 22980 1 76 0.00321094 150 0 6.73641e+07 0.0241958 512529 6.79208e+07 4.89144e+06 23001 3.35281e+07 0 0.17538 0.991803 0.79362 6.73641e+07 0.00404001 1.48854e+07 6.46507e+06 1.49857e+07 148 1.49714e+07 1.20028e+07 0.00362477 1.50106e+07 50.0653 0.00754598 0.993503 0 50.1678 GTEX-YJ8A-0526-SM-5IFHT 1 B1 2 pieces; 20-30% fibrous tissue admixed 7.8 Adipose Tissue Adipose - Subcutaneous 0002190 215 476 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.991549 199338 0.978752 0.99315 0.832393 22283 1 76 0.00300034 171 0 8.4826e+07 0.0209281 614114 8.54111e+07 5.93974e+06 22307 4.22357e+07 0 0.146359 0.99315 0.826691 8.4826e+07 0.00379216 1.87627e+07 6.78687e+06 1.89155e+07 202 1.89078e+07 1.58497e+07 0.00339561 1.88996e+07 49.9891 0.0071901 0.99475 0 50.2029 GTEX-YJ8A-0726-SM-5Q5A6 0 B1 2 pieces; 1 mm external fat on one edge (marked) and 1.4x0.7mm dense fibrous tissue on other end (marked) 7.6 Nerve Nerve - Tibial 0001323 225 466 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.991356 162073 0.97558 0.993542 0.793015 23124 1 76 0.00180816 167 0 7.72626e+07 0.0241609 594082 7.77648e+07 5.59933e+06 23150 3.84443e+07 0 0.182565 0.993542 0.787893 7.72626e+07 0.00278829 1.71122e+07 6.71385e+06 1.71918e+07 195 1.71649e+07 1.28091e+07 0.00229715 1.7301e+07 50.1974 0.00763947 0.995728 0 50.116 GTEX-YJ8A-0826-SM-5Q5A7 0 B1 2 pieces; no lesions; well trimmed of extraneous tissue 9 Blood Vessel Artery - Tibial 0007610 230 462 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.992225 153616 0.979663 0.994421 0.872057 20468 1 76 0.00162325 164 0 7.28113e+07 0.0199155 357480 7.32198e+07 4.96502e+06 20475 3.62326e+07 0 0.107606 0.994421 0.867192 7.28113e+07 0.00267104 1.56427e+07 4.61006e+06 1.58172e+07 180 1.57857e+07 1.55683e+07 0.00214599 1.58254e+07 50.0627 0.00488229 0.996617 0 50.2773 GTEX-YJ8A-1126-SM-5IFJU 1 B1 2 pieces; 1 piece more glandular than the other; no nodular hyperplasia 6.9 Prostate Prostate 0002367 245 448 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.989746 201585 0.970549 0.991634 0.762573 23708 1 76 0.00308971 154 0 7.47973e+07 0.0292666 569132 7.54283e+07 5.66307e+06 23744 3.72262e+07 0 0.207977 0.991634 0.756193 7.47973e+07 0.00385604 1.63899e+07 6.47669e+06 1.65595e+07 167 1.65435e+07 1.08658e+07 0.00347214 1.65419e+07 49.9976 0.00754534 0.993522 0 50.2573 GTEX-YJ8A-1226-SM-5IFHH 1 B1 6 pieces; well trimmed 8.5 Esophagus Esophagus - Muscularis 0004648 267 427 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.992243 195431 0.978024 0.993848 0.840736 22349 1 76 0.00296498 276 0 9.59329e+07 0.0216507 966775 9.65267e+07 6.95387e+06 22370 4.77832e+07 0 0.137288 0.993848 0.835564 9.59329e+07 0.00358502 2.05927e+07 8.50262e+06 2.08343e+07 268 2.07912e+07 1.74162e+07 0.0032745 2.07811e+07 49.9879 0.0100156 0.995452 0 50.2916 GTEX-YJ8A-1426-SM-5PNV7 1 B1 5 pieces; well trimmed 8.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 267 427 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993172 239790 0.977364 0.99472 0.850303 22640 1 76 0.00182559 281 0 1.15703e+08 0.0223075 1.36743e+06 1.16317e+08 1.16096e+07 22665 5.76555e+07 0 0.127062 0.99472 0.845813 1.15703e+08 0.00265272 2.50377e+07 1.02913e+07 2.51992e+07 316 2.51182e+07 2.22252e+07 0.00223851 2.5281e+07 50.1615 0.0117561 0.996268 0 50.1607 GTEX-YJ8A-1526-SM-5P9FT 2 B1 6 pieces; surface autolysis; mucosa and muscularis sampled 6.9 Stomach Stomach 0000945 278 416 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.971864 208401 0.98603 0.972463 0.870577 23687 1 76 0.00285202 603 0 1.52379e+08 0.0134907 2.10912e+06 1.56694e+08 5.2974e+06 23709 7.58826e+07 0 0.115453 0.972463 0.846604 1.52379e+08 0.00351355 3.50974e+07 2.21172e+08 3.62899e+07 499 3.62138e+07 4.54732e+07 0.00318258 3.52675e+07 49.3381 0.0134601 0.973061 0 50.8352 GTEX-YJ8A-1726-SM-5P9IQ 1 B1 6 pieces; all have muscularis; 2 have severely autolyzed colonic mucosa 6.7 Colon Colon - Sigmoid 0001159 282 413 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.992478 198104 0.972781 0.992937 0.816931 24461 1 76 0.00317725 279 0 9.43787e+07 0.026886 726998 9.505e+07 3.16134e+06 24495 4.70226e+07 0 0.15585 0.992937 0.811161 9.43787e+07 0.00346886 2.05546e+07 8.12695e+06 2.07104e+07 265 2.06162e+07 1.68282e+07 0.00332299 2.06937e+07 50.0939 0.00764858 0.993397 0 50.1889 GTEX-YJ8A-1926-SM-EZ6LQ 1 B1 2 pieces; 1 has central hole 5.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 285 411 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.984953 133225 0.980592 0.986615 0.866227 22022 1 76 0.00252035 272 0 8.94588e+07 0.0191478 1.84103e+06 9.06724e+07 7.08089e+06 22041 4.45762e+07 0 0.114364 0.986615 0.854633 8.94588e+07 0.00372756 1.98713e+07 7.44751e+06 2.00861e+07 317 2.00251e+07 1.44513e+07 0.00312294 2.00651e+07 50.05 0.0203042 0.988277 0 50.2688 GTEX-YJ8O-0126-SM-5QGRG 1 C1 2 pieces, ~30% occlusive atherosis in one, adherent fat up to ~0.5mm on one, delineated 5.8 Blood Vessel Artery - Coronary 0001621 713 1256 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4954 03/29/2014 TruSeq.v1 RNASEQ 0.991525 231676 0.972534 0.992709 0.805424 22603 1 76 0.00194367 150 0 6.96514e+07 0.0271034 267970 7.0163e+07 4.71122e+06 22624 3.46487e+07 0 0.16711 0.992709 0.799552 6.96514e+07 0.00301207 1.49614e+07 6.49742e+06 1.5112e+07 169 1.50164e+07 1.21919e+07 0.00247723 1.51433e+07 50.2104 0.00381925 0.993893 0 50.2504 GTEX-YJ8O-0226-SM-5S2NL 1 C1 6 pieces, minimal atherosis 6.9 Blood Vessel Artery - Aorta 0001496 716 1254 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992073 236210 0.973551 0.993255 0.785559 21236 1 76 0.00192895 129 0 5.96196e+07 0.0260874 122597 6.00245e+07 4.1377e+06 21255 2.9649e+07 0 0.187991 0.993255 0.780261 5.96196e+07 0.00279078 1.28248e+07 5.23212e+06 1.29536e+07 144 1.28912e+07 1.00172e+07 0.00235935 1.29598e+07 50.1327 0.00204245 0.994438 0 50.2498 GTEX-YJ8O-0326-SM-5RQJW 1 C1 6 pieces, all muscularis, good specimens 5.8 Esophagus Esophagus - Gastroesophageal Junction 0004550 718 1252 BP-48564 RNA Extraction from Paxgene-derived Lysate Plate Based 01/22/2014 LCSET-4955 04/01/2014 TruSeq.v1 RNASEQ 0.991692 181652 0.970896 0.992835 0.814407 21897 1 76 0.00202205 156 0 6.62924e+07 0.0289338 1.28744e+06 6.67709e+07 3.3911e+06 21913 3.29943e+07 0 0.156489 0.992835 0.808571 6.62924e+07 0.00291415 1.44211e+07 6.30022e+06 1.45059e+07 186 1.44239e+07 8.28137e+06 0.00246759 1.45763e+07 50.2627 0.0192814 0.993978 0 50.1466 GTEX-YJ8O-0826-SM-5CVM3 1 C1 2 pieces, adherent fatty nubbin on one, ~ 3mm, delineated 6.1 Heart Heart - Atrial Appendage 0006631 727 1246 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986367 160110 0.981746 0.989974 0.831766 21298 1 76 0.00457706 148 0 6.71755e+07 0.0180766 2.00651e+06 6.78558e+07 1.23114e+07 21308 3.33638e+07 0 0.14998 0.989974 0.823427 6.71755e+07 0.00668322 1.47677e+07 1.56018e+07 1.4717e+07 188 1.46243e+07 6.76402e+06 0.00562631 1.50497e+07 50.7167 0.0295702 0.993582 0 49.9141 GTEX-YJ8O-0926-SM-EAZ2Z 1 C1 2 pieces, minimal ischemic changes 5.5 Heart Heart - Left Ventricle 0006566 729 1244 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-10517 04/16/2017 TruSeq.v1 RNASEQ 0.990064 244379 0.986221 0.991223 0.843693 20593 1 76 0.00162459 369 0 1.09811e+08 0.0137119 6.69137e+06 1.10783e+08 8.84006e+06 20602 5.4728e+07 0 0.142528 0.991223 0.836288 1.09811e+08 0.00260419 2.40443e+07 4.25507e+07 2.45811e+07 397 2.44093e+07 5.85899e+06 0.00211382 2.43098e+07 49.8979 0.0604007 0.992383 0 50.5519 GTEX-YJ8O-1026-SM-5CVM5 1 C1 2 pieces, involutional cortex, small (~1mm) follicular cyst, delineated 6.1 Ovary Ovary 0000992 731 1243 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983504 324912 0.961474 0.987784 0.718301 24892 1 76 0.00500944 149 0 8.44416e+07 0.0382699 92706 8.54859e+07 1.76561e+07 24941 4.18769e+07 0 0.243174 0.987784 0.709526 8.44416e+07 0.00683541 1.83024e+07 1.27016e+07 1.84217e+07 152 1.85308e+07 1.44643e+07 0.00591847 1.85417e+07 50.0147 0.00108446 0.992064 0 50.1624 GTEX-YJ8O-1026-SM-DMRPU 1 C1 2 pieces, involutional cortex, small (~1mm) follicular cyst, delineated Ovary Ovary 0000992 731 1243 BP-53345 DNA Extraction from Paxgene-derived Lysate Plate Based 05/30/2014 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-YJ8O-1026-SM-DMZ3B 1 C1 2 pieces, involutional cortex, small (~1mm) follicular cyst, delineated Ovary Ovary 0000992 731 1243 BP-53345 DNA Extraction from Paxgene-derived Lysate Plate Based 05/30/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-YJ8O-1126-SM-5P9IS 1 C1 2 pieces, all myometrium 7.4 Uterus Uterus 0000995 733 1241 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.991237 275393 0.964464 0.991711 0.716805 25536 1 76 0.00338196 277 0 1.15801e+08 0.0352213 214368 1.16769e+08 3.90808e+06 25599 5.76689e+07 0 0.247659 0.991711 0.710864 1.15801e+08 0.00361991 2.51422e+07 1.0713e+07 2.52531e+07 279 2.51742e+07 1.78218e+07 0.00350088 2.52779e+07 50.1028 0.00183583 0.992186 0 50.1101 GTEX-YJ8O-1226-SM-5P9JE 1 C1 6 pieces, squamous epithelium is ~0.25mm thick 7.3 Vagina Vagina 0000996 735 1240 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.99028 218178 0.968126 0.99095 0.713411 25674 1 76 0.003438 209 0 9.26248e+07 0.0315998 194206 9.34707e+07 2.9119e+06 25717 4.61455e+07 0 0.254716 0.99095 0.706954 9.26248e+07 0.00367128 2.06129e+07 1.18369e+07 2.06923e+07 208 2.06651e+07 1.44935e+07 0.00355456 2.07036e+07 50.0465 0.00207772 0.991619 0 50.0962 GTEX-YJ8O-1426-SM-5PNV9 1 C1 6 pieces, all muscularis propria, excellent specimens 6 Colon Colon - Sigmoid 0001159 742 1234 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99148 168667 0.967172 0.99329 0.798763 22928 1 76 0.00195693 156 0 6.74286e+07 0.0325645 522752 6.78841e+07 6.91923e+06 22952 3.35763e+07 0 0.168409 0.99329 0.793404 6.74286e+07 0.00298298 1.42982e+07 6.0846e+06 1.44552e+07 168 1.4407e+07 1.02973e+07 0.00246902 1.446e+07 50.0917 0.00770066 0.9951 0 50.2729 GTEX-YJ8O-1826-SM-5HL82 2 C1 2 pieces moderate/marked congestion/edema; foci of pneumonia and probably fibrosis 7 Lung Lung 0008952 752 1227 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987943 277667 0.971658 0.991217 0.752813 23912 1 76 0.00229551 134 0 6.05426e+07 0.0279828 115813 6.1079e+07 5.19412e+06 23941 3.00657e+07 0 0.218845 0.991217 0.746201 6.05426e+07 0.00354681 1.32422e+07 6.32442e+06 1.33407e+07 140 1.3361e+07 9.57827e+06 0.00291909 1.34122e+07 50.0957 0.00189612 0.99449 0 50.1853 GTEX-YJ8O-2226-SM-5IFHW 1 C1 2 pieces, one all fat, the other with areas of prominent adenosis/fibrocystic change, dominant area encircled 5.9 Breast Breast - Mammary Tissue 0008367 762 1219 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988665 201808 0.97388 0.990598 0.799346 23789 1 76 0.00298381 205 0 8.61719e+07 0.0257695 464122 8.69897e+07 6.03374e+06 23820 4.2866e+07 0 0.174535 0.990598 0.791831 8.61719e+07 0.00381708 1.89064e+07 7.57636e+06 1.90192e+07 216 1.89932e+07 1.35221e+07 0.00339963 1.90893e+07 50.1262 0.00533536 0.992532 0 50.1487 GTEX-YJ8O-2426-SM-5HL7S 0 C1 2 pieces; a few foci fibrous tissue/vessels 6.6 Adipose Tissue Adipose - Subcutaneous 0002190 806 1177 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987086 264005 0.970208 0.990615 0.783434 23842 1 76 0.00212025 166 0 7.47364e+07 0.0294882 313090 7.54444e+07 7.20423e+06 23870 3.71419e+07 0 0.186774 0.990615 0.776082 7.47364e+07 0.00320905 1.63503e+07 7.37876e+06 1.65324e+07 178 1.65743e+07 1.21219e+07 0.00266271 1.65562e+07 49.9726 0.00414994 0.994145 0 50.2769 GTEX-YJ8O-2526-SM-5HL85 0 C1 6 pieces; minimal adherent subcutaneous fat; squamous epithelium is ~50-60microns thick 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 820 1164 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988267 300118 0.975746 0.99145 0.790902 24320 1 76 0.00215287 195 0 7.61977e+07 0.0239625 271380 7.68548e+07 7.17635e+06 24346 3.78858e+07 0 0.184843 0.99145 0.78414 7.61977e+07 0.00323118 1.67008e+07 8.38808e+06 1.68541e+07 181 1.68992e+07 1.34821e+07 0.00269029 1.68849e+07 49.9789 0.00353107 0.994634 0 50.2284 GTEX-YJ8O-2626-SM-5HL8H 0 C1 2 pieces; rim of discontinuous fat on one, up to ~0.5mm; fairly clean specimens 6 Nerve Nerve - Tibial 0001323 830 1154 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990054 230792 0.962206 0.992601 0.745089 24124 1 76 0.00213281 136 0 6.36411e+07 0.0375277 239184 6.41155e+07 5.95565e+06 24162 3.16601e+07 0 0.217118 0.992601 0.739576 6.36411e+07 0.00309357 1.38548e+07 6.83439e+06 1.39687e+07 144 1.39706e+07 9.38734e+06 0.00261196 1.40058e+07 50.0627 0.00373052 0.995149 0 50.2047 GTEX-YJ8O-2726-SM-5IFJ7 0 C1 2 pieces with additional minute fragments of fat/fibrous tissue, ensquared (avoid); fairly clean specimens, one a section through a bifurcation in the artery 7.8 Blood Vessel Artery - Tibial 0007610 833 1152 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4830 03/20/2014 TruSeq.v1 RNASEQ 0.988493 184110 0.973202 0.990596 0.813549 22791 1 76 0.00308287 168 0 7.57494e+07 0.0264418 307203 7.64685e+07 6.07009e+06 22819 3.76904e+07 0 0.159653 0.990596 0.805898 7.57494e+07 0.00383884 1.62487e+07 6.17979e+06 1.64288e+07 173 1.64234e+07 1.36992e+07 0.00346005 1.64034e+07 49.9695 0.00401738 0.992699 0 50.2756 GTEX-YJ8O-2826-SM-5CVM4 0 C1 2 pieces, ~5-10% interstitial foci of fat and vessels in each, but good specimens 7 Muscle Muscle - Skeletal 0011907 835 1150 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988766 209227 0.985465 0.9919 0.881214 19353 1 76 0.00444611 123 0 6.61006e+07 0.0143054 876968 6.66404e+07 1.22534e+07 19359 3.28455e+07 0 0.104251 0.9919 0.874076 6.61006e+07 0.00639283 1.4494e+07 9.69185e+06 1.43642e+07 146 1.4359e+07 1.25873e+07 0.00541639 1.46778e+07 50.5489 0.0131597 0.995033 0 49.7751 GTEX-Z93S-0002-SM-4YUVX C1 Blood Whole Blood 0013756 883 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Z93S-0002-SM-53IUJ C1 Blood Whole Blood 0013756 883 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Z93S-0002-SM-6UH3P C1 Blood Whole Blood 0013756 883 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Z93S-0005-SM-4RGLW C1 8 Blood Whole Blood 0013756 883 BP-35061 RNA isolation_PAXgene Blood RNA (Manual) 01/11/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.989905 866891 0.970583 0.992084 0.730108 23535 1 76 0.00257859 211 0 1.17714e+08 0.0287616 260346 1.18653e+08 1.04931e+07 23575 5.85204e+07 0 0.240475 0.992084 0.724329 1.17714e+08 0.00337269 2.62567e+07 4.62502e+07 2.65676e+07 253 2.66707e+07 2.19288e+07 0.00297477 2.64185e+07 49.7624 0.00219417 0.994263 0 50.2943 GTEX-Z93S-0008-SM-4RGM5 C1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 1039 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.992295 772718 0.97232 0.994147 0.83331 22283 1 76 0.00205337 304 0 1.09924e+08 0.0273168 429390 1.10571e+08 9.773e+06 22309 5.47388e+07 0 0.139009 0.994147 0.828433 1.09924e+08 0.00247664 2.44038e+07 1.61969e+07 2.45162e+07 297 2.458e+07 2.4452e+07 0.00226461 2.454e+07 49.9593 0.00388338 0.996 0 50.1148 GTEX-Z93S-0011-R10a-SM-4RGNM C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.989995 758174 0.961942 0.992995 0.854939 23321 1 76 0.00239486 270 0 8.00251e+07 0.0376 4.4405e+06 8.05896e+07 7.24069e+06 23333 3.97777e+07 0 0.107003 0.992995 0.848951 8.00251e+07 0.0030828 1.74209e+07 1.62579e+07 1.77245e+07 275 1.77466e+07 1.00495e+07 0.00273779 1.76257e+07 49.829 0.0551001 0.995996 0 50.4319 GTEX-Z93S-0011-R10a-SM-AHZNS C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 1015 ChIP-Seq GTEX-Z93S-0011-R10a-SM-CYKR2 C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 RIP-Seq GTEX-Z93S-0011-R11a-SM-4RGNN C1, A1 8.3 Brain Brain - Cerebellar Hemisphere 0002037 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990084 677219 0.946606 0.992247 0.755306 23041 1 76 0.00248806 163 0 7.47458e+07 0.0529865 1.4454e+06 7.53298e+07 6.6979e+06 23070 3.71692e+07 0 0.1913 0.992247 0.749451 7.47458e+07 0.00309226 1.60771e+07 1.23526e+07 1.62186e+07 186 1.6255e+07 9.64794e+06 0.0027895 1.61957e+07 49.9087 0.0191876 0.994411 0 50.219 GTEX-Z93S-0011-R2a-SM-4RGNG C1, A1 8.2 Brain Brain - Substantia nigra 0002038 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990287 997658 0.957561 0.993147 0.85073 23329 1 76 0.00232381 374 0 9.51309e+07 0.0421283 3.28682e+06 9.57873e+07 8.93799e+06 23342 4.72974e+07 0 0.106831 0.993147 0.8449 9.51309e+07 0.00304851 2.05834e+07 2.12801e+07 2.09278e+07 344 2.08322e+07 1.21316e+07 0.00268512 2.09489e+07 50.1397 0.0343137 0.996008 0 50.4148 GTEX-Z93S-0011-R3b-SM-4RGNH C1, A1 7.7 Brain Brain - Anterior cingulate cortex (BA24) 0009835 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991882 571698 0.963169 0.993958 0.860283 22205 1 76 0.0023636 159 0 6.46104e+07 0.0363687 3.82987e+06 6.50031e+07 5.35345e+06 22217 3.21235e+07 0 0.102886 0.993958 0.855085 6.46104e+07 0.00308455 1.41096e+07 1.39492e+07 1.42577e+07 196 1.42021e+07 7.94173e+06 0.00272332 1.42931e+07 50.1596 0.0589183 0.996035 0 50.261 GTEX-Z93S-0011-R5b-SM-4RGNI C1, A1 8.1 Brain Brain - Caudate (basal ganglia) 0001873 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990895 553484 0.961948 0.993227 0.838118 22425 1 76 0.00254056 159 0 6.1823e+07 0.0377779 4.68173e+06 6.22446e+07 5.22063e+06 22442 3.07426e+07 0 0.12383 0.993227 0.832441 6.1823e+07 0.00339333 1.33793e+07 1.57276e+07 1.37095e+07 186 1.35954e+07 6.1142e+06 0.00296595 1.36295e+07 50.0627 0.075215 0.995559 0 50.6095 GTEX-Z93S-0011-R6b-SM-4RGNJ C1, A1 8.4 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991735 617410 0.956605 0.993765 0.833429 23611 1 76 0.00236524 160 0 6.61889e+07 0.0429573 3.54834e+06 6.66042e+07 5.69644e+06 23629 3.29276e+07 0 0.123176 0.993765 0.828233 6.61889e+07 0.00303863 1.43815e+07 1.3759e+07 1.45134e+07 186 1.44936e+07 8.5577e+06 0.00270125 1.45408e+07 50.0812 0.0532751 0.995796 0 50.2283 GTEX-Z93S-0011-R7b-SM-4RGNK C1, A1 7.7 Brain Brain - Putamen (basal ganglia) 0001874 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.991444 652619 0.963041 0.993779 0.850013 22540 1 76 0.00255625 268 0 7.91301e+07 0.0367253 7.23535e+06 7.96254e+07 7.2538e+06 22551 3.93684e+07 0 0.113028 0.993779 0.844726 7.91301e+07 0.00325132 1.71215e+07 2.35009e+07 1.76057e+07 317 1.74054e+07 7.11424e+06 0.00290297 1.74841e+07 50.1127 0.0908674 0.996115 0 50.6972 GTEX-Z93S-0011-R8a-SM-4RGNL C1, A1 7.2 Brain Brain - Hypothalamus 0001898 1015 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.99114 619132 0.959497 0.993444 0.844736 23289 1 76 0.00239752 206 0 7.53884e+07 0.0401828 4.21463e+06 7.5886e+07 6.74793e+06 23308 3.75066e+07 0 0.114761 0.993444 0.839198 7.53884e+07 0.00305987 1.64534e+07 1.45052e+07 1.67405e+07 245 1.66609e+07 8.88139e+06 0.00272793 1.67093e+07 50.0725 0.055539 0.995748 0 50.4324 GTEX-Z93S-0126-SM-5HL7M 0 C1 6 pieces, squamous epithelium is ~80 microns thick 7.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1038 1261 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989247 294495 0.973808 0.992069 0.794156 23150 1 76 0.00226042 196 0 7.37403e+07 0.025985 287288 7.43298e+07 6.23994e+06 23180 3.6676e+07 0 0.179653 0.992069 0.787857 7.37403e+07 0.00339761 1.60595e+07 8.74385e+06 1.62555e+07 177 1.62571e+07 1.21753e+07 0.0028274 1.62527e+07 49.9932 0.00386504 0.99489 0 50.3032 GTEX-Z93S-0226-SM-5HL7R 0 C1 2 pieces, one is ~10% fibrous tissue, delineated 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 1040 1259 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989617 241707 0.972734 0.992176 0.792698 22315 1 76 0.00217959 144 0 6.42226e+07 0.0270232 261920 6.47291e+07 5.33756e+06 22342 3.19373e+07 0 0.180037 0.992176 0.786496 6.42226e+07 0.00331967 1.40621e+07 6.74441e+06 1.41058e+07 157 1.4093e+07 9.95563e+06 0.00274816 1.42294e+07 50.2409 0.00404641 0.994735 0 50.0776 GTEX-Z93S-0326-SM-5HL84 1 C1 2 pieces 7 Heart Heart - Atrial Appendage 0006631 1046 1254 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990963 224755 0.982293 0.993509 0.857851 21741 1 76 0.00233405 268 0 7.96288e+07 0.0174425 1.96367e+06 8.0149e+07 7.01981e+06 21759 3.96288e+07 0 0.124442 0.993509 0.852283 7.96288e+07 0.00338597 1.74751e+07 1.32585e+07 1.74865e+07 258 1.74994e+07 1.18836e+07 0.00285866 1.76393e+07 50.199 0.0245003 0.996055 0 50.0163 GTEX-Z93S-0526-SM-EVYB4 1 C1 2 pieces, mulitple lymphoid aggregates consistent with Hashimoto's thyroiditis, rep. areas delineated; regressive/fibrotic areas present 5.5 Thyroid Thyroid 0002046 1056 1245 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.98586 275598 0.963263 0.986431 0.781253 25205 1 76 0.00281264 200 0 8.88045e+07 0.033933 406262 9.0026e+07 4.05354e+06 25237 4.41162e+07 0 0.182009 0.986431 0.770653 8.88045e+07 0.00385875 1.94711e+07 1.49343e+07 1.96354e+07 212 1.96313e+07 1.42375e+07 0.00333539 1.95305e+07 49.8713 0.00451272 0.987002 0 50.2101 GTEX-Z93S-0826-SM-5HL7Y 0 C1 2 pieces, good clean specimens, trace minute nubbins of fat on one aliquot, ~0.3mm 6.3 Nerve Nerve - Tibial 0001323 1060 1243 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.985784 308878 0.960021 0.988508 0.718741 25359 1 76 0.00221175 216 0 8.7717e+07 0.0397386 305976 8.87367e+07 7.71972e+06 25416 4.36106e+07 0 0.241279 0.988508 0.710482 8.7717e+07 0.00324862 1.90239e+07 8.99172e+06 1.91779e+07 204 1.91738e+07 1.19497e+07 0.00272876 1.92526e+07 50.1025 0.00344813 0.991233 0 50.2016 GTEX-Z93S-0926-SM-5HL8B 0 C1 2 pieces, good clean specimens 7.8 Blood Vessel Artery - Tibial 0007610 1061 1242 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990986 241001 0.971474 0.993363 0.835121 21171 1 76 0.00198465 140 0 7.08266e+07 0.0281428 169196 7.12999e+07 6.49587e+06 21183 3.52423e+07 0 0.136353 0.993363 0.829578 7.08266e+07 0.00299861 1.49243e+07 6.57437e+06 1.51123e+07 164 1.50957e+07 1.43047e+07 0.00249042 1.50987e+07 50.0049 0.00237302 0.995739 0 50.3129 GTEX-Z93S-1326-SM-5CVMR 0 C1 2 pieces, minimal interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 1070 1236 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985923 301818 0.986213 0.990526 0.885243 20079 1 76 0.00479139 202 0 9.23566e+07 0.0134532 615500 9.32399e+07 1.93629e+07 20086 4.58212e+07 0 0.100969 0.990526 0.876857 9.23566e+07 0.00689709 1.99365e+07 1.12512e+07 2.00045e+07 213 2.01068e+07 1.99939e+07 0.00583935 2.02143e+07 50.1333 0.00660125 0.995129 0 50.0851 GTEX-Z93S-1326-SM-CYKV7 0 C1 2 pieces, minimal interstitial fat 7.6 Muscle Muscle - Skeletal 0011907 1070 1236 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 RIP-Seq GTEX-Z93S-1626-SM-5CVMB 0 C1 6 pieces, squamous epithelium is ~50microns thick; minimal fat 6.6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1088 1220 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986104 271017 0.974718 0.989601 0.798479 23437 1 76 0.00500502 148 0 6.99788e+07 0.0250938 360041 7.07142e+07 1.26961e+07 23457 3.47375e+07 0 0.176239 0.989601 0.790176 6.99788e+07 0.00710854 1.53857e+07 8.88872e+06 1.55484e+07 146 1.55794e+07 1.14302e+07 0.00605306 1.55886e+07 50.0148 0.0050915 0.993099 0 50.2629 GTEX-Z93S-1726-SM-5HL8G 2 C1 2 pieces, spermatogenesis present but cells badly autolyzed 6 Testis Testis 0000473 1090 1219 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988472 287840 0.916727 0.990857 0.71163 32197 1 76 0.00226038 134 0 6.64432e+07 0.082925 572512 6.70564e+07 5.90052e+06 32246 3.30659e+07 0 0.205097 0.990857 0.705124 6.64432e+07 0.00309212 1.35762e+07 1.05592e+07 1.35786e+07 136 1.36197e+07 1.0172e+07 0.00267525 1.36747e+07 50.1006 0.00853777 0.993242 0 50.0045 GTEX-Z93S-2426-SM-5HL8N 3 C1 6 pieces, mucosa badly autolyzed/sloughed 5.9 Colon Colon - Transverse 0001157 1109 1204 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989121 211239 0.972555 0.991762 0.833937 23162 1 76 0.0020415 169 0 7.48766e+07 0.0271774 797536 7.54986e+07 6.53646e+06 23185 3.72189e+07 0 0.138617 0.991762 0.827067 7.48766e+07 0.00314079 1.61808e+07 7.21996e+06 1.6244e+07 186 1.62003e+07 1.33735e+07 0.00258968 1.64138e+07 50.3273 0.0105636 0.994403 0 50.0975 GTEX-Z93S-2626-SM-57WBX 1 C1 6 pieces, all muscularis propria, appropriate good specimens 6 Colon Colon - Sigmoid 0001159 1117 1197 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987862 366955 0.968935 0.991114 0.828169 23315 1 76 0.00201287 206 0 8.45261e+07 0.0308598 1.13525e+06 8.5284e+07 1.02293e+07 23337 4.19854e+07 0 0.140766 0.991114 0.82081 8.45261e+07 0.00452535 1.80138e+07 9.12111e+06 1.81843e+07 222 1.81449e+07 1.3346e+07 0.00326499 1.83114e+07 50.2285 0.0133114 0.994365 0 50.2355 GTEX-Z93S-2826-SM-57WBL 1 C1 4 pieces, granular layer well defined; Purkinje cells show minimal ischemic damage 6.5 Brain Brain - Cerebellum 0002037 1139 1176 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990408 409061 0.949813 0.992546 0.737625 24511 1 76 0.00229013 271 0 1.0372e+08 0.0498248 1.84086e+06 1.04499e+08 1.26166e+07 24548 5.16057e+07 0 0.212188 0.992546 0.732127 1.0372e+08 0.00380515 2.24753e+07 1.52099e+07 2.25548e+07 293 2.25912e+07 1.27065e+07 0.00304601 2.26415e+07 50.0556 0.0176162 0.994684 0 50.0883 GTEX-Z93S-2926-SM-57WB9 1 C1 4 pieces 6.6 Brain Brain - Cortex 0001870 1141 1175 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.99155 357106 0.966269 0.99413 0.855602 22773 1 76 0.00215903 267 0 7.96881e+07 0.0333353 3.1078e+06 8.01586e+07 8.96515e+06 22785 3.96576e+07 0 0.110667 0.99413 0.850579 7.96881e+07 0.00423904 1.75302e+07 1.67778e+07 1.75258e+07 280 1.74384e+07 9.60206e+06 0.00319634 1.77991e+07 50.5117 0.0387706 0.996709 0 49.9937 GTEX-Z93S-3026-SM-5CVMS 2 C1 1 pieces, moderately-severely autolyzed, all adenohypophysis 6.2 Pituitary Pituitary 0000007 1142 1175 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985632 218348 0.968586 0.989484 0.79418 25638 1 76 0.00491774 131 0 6.71715e+07 0.0311146 345565 6.78854e+07 1.25029e+07 25669 3.33211e+07 0 0.174406 0.989484 0.785828 6.71715e+07 0.00709481 1.38649e+07 8.26787e+06 1.397e+07 143 1.4019e+07 1.08502e+07 0.00600204 1.40573e+07 50.0682 0.00509042 0.993335 0 50.1887 GTEX-Z93T-0002-SM-58Q8Z B1 Blood Whole Blood 0013756 -434 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 LCSET-4574 01/20/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-Z93T-0002-SM-5DWTP B1 Blood Whole Blood 0013756 -434 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 GTEx_OM25_Dec_01 01/29/2014 Illumina OMNI SNP Array OMNI GTEX-Z93T-0002-SM-DLIPS B1 Blood Whole Blood 0013756 -434 BP-35069 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/14/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-Z93T-0126-SM-5HL5N 0 B1 6 pieces. 3 well trimmed; 3 with subcutaneous fat up to 1 mm. 6.9 Skin Skin - Sun Exposed (Lower leg) 0004264 17 868 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98973 197210 0.971623 0.992303 0.81903 22983 1 76 0.00224957 160 0 6.61473e+07 0.0281974 619779 6.66604e+07 7.1416e+06 23002 3.29011e+07 0 0.152593 0.992303 0.812726 6.61473e+07 0.00337439 1.44e+07 7.50505e+06 1.44795e+07 163 1.4454e+07 1.09928e+07 0.00281052 1.45882e+07 50.2312 0.00929756 0.994875 0 50.1376 GTEX-Z93T-0226-SM-5HL5Z 0 B1 2 pieces. Large aliquots, some holes 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 21 865 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991008 202268 0.967408 0.993052 0.779663 23745 1 76 0.00221259 142 0 6.8448e+07 0.0323384 485924 6.89269e+07 7.32838e+06 23767 3.40525e+07 0 0.187745 0.993052 0.774246 6.8448e+07 0.00328091 1.48858e+07 6.90617e+06 1.49488e+07 158 1.4911e+07 1.10768e+07 0.00274565 1.50612e+07 50.2505 0.00704985 0.995096 0 50.1055 GTEX-Z93T-0426-SM-5HL6G 0 B1 2 pieces. 30-40% occlusion by calcified plaques 7.9 Blood Vessel Artery - Tibial 0007610 28 860 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.98959 259166 0.972972 0.992309 0.8495 21570 1 76 0.00210015 134 0 5.75053e+07 0.0266604 191398 5.7951e+07 6.11651e+06 21582 2.85911e+07 0 0.123472 0.992309 0.842966 5.75053e+07 0.00341145 1.23094e+07 5.81524e+06 1.24411e+07 141 1.24058e+07 1.15784e+07 0.00275401 1.25029e+07 50.1949 0.00330275 0.995028 0 50.2661 GTEX-Z9EW-0002-SM-4YUV9 B1 Blood Whole Blood 0013756 -96 BP-35372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/22/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-Z9EW-0002-SM-53UAK B1 Blood Whole Blood 0013756 -96 BP-35372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/22/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-Z9EW-0002-SM-6UH37 B1 Blood Whole Blood 0013756 -96 BP-35372 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/22/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-Z9EW-0126-SM-5CVM6 1 B1 6 pieces, adherent serosa up to ~0.5mm 6.8 Blood Vessel Artery - Aorta 0001496 193 1092 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987022 194954 0.977795 0.991295 0.868242 21385 1 76 0.00453757 137 0 6.84363e+07 0.0217766 246351 6.90373e+07 1.16554e+07 21391 3.39449e+07 0 0.109553 0.991295 0.860684 6.84363e+07 0.00705947 1.48344e+07 5.16033e+06 1.49031e+07 147 1.495e+07 1.38176e+07 0.00579309 1.50661e+07 50.1934 0.00356837 0.995567 0 50.1155 GTEX-Z9EW-0226-SM-5CVM7 1 B1 2 pieces, micronodular goiter. Adherent fat on one , up to ~0.8mm 6.2 Thyroid Thyroid 0002046 198 1088 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98459 257462 0.971343 0.989347 0.778229 23332 1 76 0.00487292 117 0 6.40182e+07 0.0283886 202757 6.47075e+07 1.1929e+07 23356 3.17462e+07 0 0.193114 0.989347 0.769939 6.40182e+07 0.00728756 1.40176e+07 6.62114e+06 1.41203e+07 125 1.41971e+07 1.05872e+07 0.00607443 1.4227e+07 50.0527 0.00313344 0.994105 0 50.1825 GTEX-Z9EW-0326-SM-5CVM8 1 B1 6 pieces, all muscularis, good specimens 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 201 1087 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985476 218219 0.976844 0.989775 0.846402 22166 1 76 0.00487676 149 0 7.31377e+07 0.0228657 893205 7.38933e+07 1.35644e+07 22179 3.62911e+07 0 0.130442 0.989775 0.837747 7.31377e+07 0.00730372 1.58492e+07 7.69803e+06 1.58927e+07 158 1.59327e+07 1.26838e+07 0.00608497 1.60974e+07 50.257 0.0120878 0.994073 0 50.0685 GTEX-Z9EW-0426-SM-5CVM9 1 B1 2 pieces, diffuse macrovesicular steatosis involves ~ 50% of parenchyma 7.2 Liver Liver 0001114 202 1087 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987304 247329 0.983818 0.991105 0.877615 19799 1 76 0.00489297 106 0 6.98952e+07 0.0156351 727827 7.05226e+07 1.42855e+07 19804 3.46969e+07 0 0.106203 0.991105 0.869809 6.98952e+07 0.00703047 1.52391e+07 1.319e+07 1.51169e+07 136 1.52213e+07 1.61574e+07 0.00595762 1.53814e+07 50.2615 0.0103205 0.994906 0 49.7988 GTEX-Z9EW-0526-SM-5HL8S 1 B1 4 pieces, squamous mucosa is ~0.2mm thick, ~10% thickness. Lymphoid aggregates noted, delineated 8.9 Esophagus Esophagus - Mucosa 0006920 207 1082 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990111 204429 0.977912 0.992551 0.839767 21624 1 76 0.00224395 141 0 6.4057e+07 0.0217506 298173 6.45378e+07 5.62326e+06 21637 3.18891e+07 0 0.138145 0.992551 0.833512 6.4057e+07 0.00325112 1.44374e+07 8.56826e+06 1.44506e+07 144 1.44735e+07 1.33793e+07 0.0027463 1.45609e+07 50.1505 0.00462013 0.994992 0 50.0228 GTEX-Z9EW-0626-SM-5HL95 1 B1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 209 1081 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989433 212281 0.978708 0.992908 0.849142 21524 1 76 0.00202835 142 0 6.65726e+07 0.0209444 441469 6.70481e+07 6.46125e+06 21533 3.31049e+07 0 0.129566 0.992908 0.843119 6.65726e+07 0.00300152 1.44395e+07 5.83283e+06 1.44971e+07 159 1.45166e+07 1.29206e+07 0.00251323 1.46336e+07 50.2007 0.00658436 0.996382 0 50.0996 GTEX-Z9EW-0726-SM-5HL9H 1 B1 2 pieces, moderate congestion 6.1 Spleen Spleen 0002106 212 1079 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989343 214750 0.963798 0.99208 0.770587 23112 1 76 0.00244891 117 0 5.89906e+07 0.0356912 372457 5.94615e+07 5.41089e+06 23136 2.93389e+07 0 0.193211 0.99208 0.764484 5.89906e+07 0.00331615 1.294e+07 8.28864e+06 1.30247e+07 135 1.3024e+07 8.73068e+06 0.00288133 1.30914e+07 50.1291 0.00626383 0.994816 0 50.1631 GTEX-Z9EW-0826-SM-5HL9T 1 B1 2 pieces, trace vascular structures in one, rep area delineated 7.3 Adipose Tissue Adipose - Visceral (Omentum) 0010414 217 1074 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988668 275770 0.975744 0.99233 0.83745 22125 1 76 0.00216423 162 0 6.9187e+07 0.0240229 658943 6.97218e+07 6.36985e+06 22146 3.43876e+07 0 0.138295 0.99233 0.831027 6.9187e+07 0.00328304 1.51523e+07 6.91789e+06 1.53177e+07 180 1.53028e+07 1.08576e+07 0.00272157 1.54023e+07 50.1619 0.00945103 0.995992 0 50.2713 GTEX-Z9EW-0926-SM-5CVMM 1 B1 6 pieces, excellent lymphoid aggregates some up to 1mm thick ~10% total specimen 6.7 Small Intestine Small Intestine - Terminal Ileum 0001211 219 1073 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983742 258634 0.965 0.98799 0.767462 25000 1 76 0.00539429 135 0 7.40237e+07 0.0341983 523964 7.49235e+07 1.48207e+07 25031 3.66997e+07 0 0.197539 0.98799 0.758244 7.40237e+07 0.00764151 1.62635e+07 1.20741e+07 1.63813e+07 146 1.64276e+07 1.06258e+07 0.00651307 1.6512e+07 50.1281 0.00699332 0.992237 0 50.1804 GTEX-Z9EW-1526-SM-EZ6LU 1 B1 2 pieces, contaminating 'floaters' of small bowel mucosa present in block, delineated rep areas. 5.8 Breast Breast - Mammary Tissue 0008367 235 1061 BP-42128 RNA Extraction from Paxgene-derived Lysate Plate Based 08/09/2013 LCSET-10979 05/29/2017 TruSeq.v1 RNASEQ 0.986684 324956 0.970473 0.988165 0.818106 23742 1 76 0.00259568 277 0 9.44429e+07 0.0292444 966516 9.5574e+07 7.54974e+06 23767 4.70701e+07 0 0.152367 0.988165 0.808423 9.44429e+07 0.00370828 2.06906e+07 1.4245e+07 2.08545e+07 298 2.08515e+07 1.53077e+07 0.00315115 2.08244e+07 49.9674 0.0101127 0.989645 0 50.1972 GTEX-Z9EW-1626-SM-5CVMN 0 B1 6 pieces, minimal subcutaneous fat; squamou epithelium is ~ 40-60 microns thick 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 239 1058 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986405 213172 0.970297 0.990308 0.793567 23184 1 76 0.00489705 161 0 6.13303e+07 0.0294489 330847 6.19305e+07 1.20908e+07 23206 3.04334e+07 0 0.17673 0.990308 0.785876 6.13303e+07 0.007071 1.32507e+07 6.66998e+06 1.33287e+07 126 1.33801e+07 1.06652e+07 0.00597974 1.34253e+07 50.0844 0.00534223 0.994211 0 50.1466 GTEX-Z9EW-1726-SM-5CVMO 0 B1 2 pieces, minimal interstitial fat 7.9 Muscle Muscle - Skeletal 0011907 244 1054 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.988162 206655 0.985029 0.99174 0.883713 19113 1 76 0.00490683 131 0 6.90987e+07 0.0147688 1.21590e+06 6.96742e+07 1.27165e+07 19118 3.43242e+07 0 0.101316 0.99174 0.876413 6.90987e+07 0.00695468 1.52464e+07 9.98925e+06 1.50257e+07 152 1.50208e+07 1.282e+07 0.00592706 1.54626e+07 50.7247 0.0174513 0.995318 0 49.6354 GTEX-Z9EW-1826-SM-5CVMA 0 B1 2 pieces, ~15-20% fibrous/vascular tissue, rep. foci delineated 6.4 Adipose Tissue Adipose - Subcutaneous 0002190 248 1051 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985397 250236 0.975241 0.989528 0.820546 23862 1 76 0.00495927 148 0 7.51779e+07 0.0244682 621227 7.59735e+07 1.53222e+07 23885 3.73002e+07 0 0.154695 0.989528 0.811953 7.51779e+07 0.00700765 1.64297e+07 7.43868e+06 1.65934e+07 155 1.66455e+07 1.33566e+07 0.00597919 1.66709e+07 50.0381 0.00817689 0.993659 0 50.2478 GTEX-Z9EW-1926-SM-5CVMP 0 B1 2 pieces, one with adherent 'tag' of fibrovascular tissue, ~2mm long 6.7 Blood Vessel Artery - Tibial 0007610 251 1049 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983609 236087 0.976357 0.989141 0.853179 20994 1 76 0.00474349 131 0 6.52199e+07 0.0232373 346848 6.59359e+07 1.36101e+07 21008 3.22987e+07 0 0.123178 0.989141 0.843914 6.52199e+07 0.00741419 1.39248e+07 5.23164e+06 1.40319e+07 142 1.40882e+07 1.24148e+07 0.00607137 1.42078e+07 50.2113 0.00526038 0.994673 0 50.1916 GTEX-Z9EW-2026-SM-5CVMQ 0 B1 2 pieces, one with discontinuous rim of fibroadipose tissue up to ~1mm thick 6 Nerve Nerve - Tibial 0001323 252 1048 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984022 267912 0.969988 0.989073 0.782099 23445 1 76 0.00483556 141 0 6.42121e+07 0.0297512 256861 6.49215e+07 1.1891e+07 23471 3.18179e+07 0 0.187889 0.989073 0.773553 6.42121e+07 0.00719195 1.40462e+07 6.52622e+06 1.41624e+07 134 1.42252e+07 1.03959e+07 0.00600774 1.42952e+07 50.1227 0.00395649 0.994125 0 50.2059 GTEX-ZA64-0003-SM-4YUXC B1 Blood Whole Blood 0013756 -169 BP-35452 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZA64-0003-SM-53UAS B1 Blood Whole Blood 0013756 -169 BP-35452 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZA64-0003-SM-6UH38 B1 Blood Whole Blood 0013756 -169 BP-35452 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/25/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZA64-0126-SM-5HL8Z 1 B1 6 pieces, up to ~0.5mm adherent serosa on most 7.9 Blood Vessel Artery - Aorta 0001496 102 466 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989098 239048 0.978009 0.992454 0.866792 21595 1 76 0.00187362 209 0 8.08793e+07 0.0216362 305533 8.14942e+07 7.98937e+06 21606 4.02159e+07 0 0.111216 0.992454 0.860252 8.08793e+07 0.0028643 1.7435e+07 6.32368e+06 1.75792e+07 219 1.75978e+07 1.72797e+07 0.00236728 1.7675e+07 50.1095 0.00374914 0.99581 0 50.206 GTEX-ZA64-0226-SM-5HL9C 1 B1 2 pieces, all cortex, well-preserved, a ~1mm aherent nubbin of fat on one, delineated. 8.4 Adrenal Gland Adrenal Gland 0002369 104 464 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990326 184955 0.977071 0.993388 0.835912 22246 1 76 0.00190589 200 0 6.80763e+07 0.0225948 1.76822e+06 6.85294e+07 6.09292e+06 22262 3.38685e+07 0 0.141159 0.993388 0.830385 6.80763e+07 0.00276247 1.5114e+07 1.05835e+07 1.50924e+07 203 1.50152e+07 1.06849e+07 0.00233286 1.53774e+07 50.5959 0.0258023 0.99645 0 49.9643 GTEX-ZA64-0326-SM-5HL8T 1 B1 2 pieces, well preserved, broncial mucosa delineated (rep), patchy congestion/hemorrhagic pneumonitis, encircled rep. areas 7.9 Lung Lung 0008952 105 463 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987927 263514 0.977137 0.990343 0.814806 22802 1 76 0.00206482 140 0 6.60554e+07 0.022474 310210 6.66996e+07 5.74186e+06 22829 3.28719e+07 0 0.162331 0.990343 0.806938 6.60554e+07 0.00299275 1.46949e+07 5.72885e+06 1.47946e+07 151 1.48123e+07 1.27356e+07 0.00252765 1.48299e+07 50.0297 0.00465086 0.992759 0 50.1689 GTEX-ZA64-0426-SM-5HL96 0 B1 2 pieces, well-preserved 7 Thyroid Thyroid 0002046 109 459 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989229 234842 0.969718 0.992472 0.780387 23654 1 76 0.00197654 160 0 7.43944e+07 0.0299659 289260 7.49587e+07 6.85111e+06 23689 3.70003e+07 0 0.189331 0.992472 0.774512 7.43944e+07 0.00284997 1.63272e+07 7.35545e+06 1.64159e+07 167 1.64541e+07 1.35012e+07 0.00241182 1.65116e+07 50.0872 0.00385892 0.995714 0 50.1354 GTEX-ZA64-0526-SM-5HL9I 1 B1 6 pieces, well preserved, all muscularis; switched with 0625; relabel for use 7.8 Esophagus Esophagus - Muscularis 0004648 114 454 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990338 243304 0.977327 0.993253 0.84226 21738 1 76 0.00189932 161 0 7.07498e+07 0.0224384 692044 7.12304e+07 6.6062e+06 21753 3.52007e+07 0 0.135067 0.993253 0.836578 7.07498e+07 0.00284301 1.5197e+07 7.18405e+06 1.53515e+07 193 1.53419e+07 1.20196e+07 0.00236978 1.53975e+07 50.0904 0.00971557 0.996169 0 50.2529 GTEX-ZA64-0626-SM-5HL9O 1 B1 6 pieces, well preserved; squamous mucosa is ~0.3-0.5mm thick, switched with 0525; relabel for use 9.2 Esophagus Esophagus - Mucosa 0006920 115 453 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990944 249482 0.975719 0.993277 0.82367 22372 1 76 0.00198605 215 0 7.79851e+07 0.0239342 510673 7.85129e+07 6.53262e+06 22389 3.88204e+07 0 0.152049 0.993277 0.818133 7.79851e+07 0.00282627 1.74989e+07 1.13054e+07 1.75607e+07 206 1.75614e+07 1.53124e+07 0.00240517 1.76694e+07 50.1533 0.00650432 0.99561 0 50.0882 GTEX-ZA64-0826-SM-5HL9U 0 B1 6 pieces, beautifully preserved, mucosa up to 1mm thick in all, 80-100% thickness 7.1 Stomach Stomach 0000945 118 450 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.985873 179512 0.981591 0.988612 0.846705 21481 1 76 0.00207925 311 0 6.77807e+07 0.0178314 933563 6.85615e+07 6.3539e+06 21496 3.37143e+07 0 0.134886 0.988612 0.837062 6.77807e+07 0.00319163 1.54638e+07 6.20102e+07 1.57633e+07 225 1.57357e+07 1.53625e+07 0.0026339 1.56665e+07 49.8899 0.0136164 0.991351 0 50.4794 GTEX-ZA64-0926-SM-5HL7H 1 B1 2 pieces, few small vessels, delineated, incidental omental lymph node in one, ensquared 8.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 124 444 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990493 267479 0.981564 0.993277 0.854962 21576 1 76 0.00185262 277 0 8.21231e+07 0.0181942 762753 8.2679e+07 7.00681e+06 21587 4.08701e+07 0 0.126602 0.993277 0.849214 8.21231e+07 0.00281835 1.82134e+07 9.00094e+06 1.83517e+07 268 1.83327e+07 1.48648e+07 0.00233413 1.84484e+07 50.1574 0.00922547 0.996061 0 50.1892 GTEX-ZA64-1026-SM-5HL8R 0 B1 6 pieces, minimal subcutaneous fat; squamous epithelium is ~0.1mm thick 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 125 443 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988293 300221 0.973322 0.991506 0.802997 22667 1 76 0.0020138 158 0 6.26995e+07 0.0265006 763250 6.32367e+07 5.68585e+06 22689 3.11705e+07 0 0.170325 0.991506 0.796177 6.26995e+07 0.00318177 1.3791e+07 7.72322e+06 1.3969e+07 159 1.39496e+07 9.84872e+06 0.00259589 1.40036e+07 50.0965 0.0120697 0.994719 0 50.3206 GTEX-ZA64-1226-SM-5HL7B 1 B1 6 pieces, ileal mucosa, well-preserved, rare lymphoid follicles delineated. Switched with 1325; may be used when relabeled as ileum, good specimens 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 141 427 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988829 213147 0.976699 0.991977 0.835235 23126 1 76 0.00210162 205 0 7.7592e+07 0.0228378 811441 7.82195e+07 7.33803e+06 23146 3.85861e+07 0 0.141463 0.991977 0.828534 7.7592e+07 0.00317582 1.71685e+07 1.05659e+07 1.75209e+07 244 1.74848e+07 1.19126e+07 0.00263702 1.74266e+07 49.9167 0.0103739 0.995125 0 50.508 GTEX-ZA64-1426-SM-5CVMC 1 B1 6 pieces, all muscularis, trace serosa, good specimens 7.3 Colon Colon - Sigmoid 0001159 151 417 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987994 187212 0.977856 0.991575 0.854607 21470 1 76 0.00461662 136 0 6.41999e+07 0.0218708 631027 6.47454e+07 1.17574e+07 21481 3.18844e+07 0 0.123249 0.991575 0.847407 6.41999e+07 0.00672292 1.38906e+07 6.88878e+06 1.39714e+07 144 1.39634e+07 1.11216e+07 0.00566597 1.41107e+07 50.2623 0.00974628 0.995155 0 50.145 GTEX-ZA64-1526-SM-5CVMD 0 B1 2 pieces, fibroadipose stroma; no ductal elements present 6.6 Breast Breast - Mammary Tissue 0008367 166 402 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987061 263575 0.975893 0.990667 0.815067 22290 1 76 0.0047631 138 0 6.85028e+07 0.0238814 376102 6.91481e+07 1.32184e+07 22312 3.40114e+07 0 0.160826 0.990667 0.80746 6.85028e+07 0.00658405 1.51041e+07 7.20788e+06 1.52502e+07 148 1.52742e+07 1.16648e+07 0.00567026 1.53144e+07 50.0659 0.00543908 0.994272 0 50.2407 GTEX-ZA64-1626-SM-5CVME 0 B1 2 pieces, well-preserved. Spermatogenesis is present 5.9 Testis Testis 0000473 171 397 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985259 394041 0.927192 0.989042 0.740234 31780 1 76 0.00485462 118 0 6.38697e+07 0.072497 579003 6.45774e+07 1.21627e+07 31831 3.17023e+07 0 0.186958 0.989042 0.732123 6.38697e+07 0.00685654 1.32121e+07 1.5297e+07 1.3272e+07 117 1.33487e+07 1.06444e+07 0.00585175 1.33534e+07 50.0087 0.00896604 0.992826 0 50.1131 GTEX-ZA64-1726-SM-5CVMF 1 B1 2 pieces, both ~50% glandular tissue (delineated); rest is fibromuscular stroma 7.5 Salivary Gland Minor Salivary Gland 0006330 177 391 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985737 220133 0.972807 0.989071 0.79765 23665 1 76 0.00526481 118 0 6.14671e+07 0.0254731 256385 6.21463e+07 1.06214e+07 23690 3.04719e+07 0 0.175156 0.989071 0.788933 6.14671e+07 0.00728648 1.36388e+07 8.23979e+06 1.37162e+07 125 1.37628e+07 1.051e+07 0.00627224 1.37884e+07 50.0465 0.00412551 0.992405 0 50.1414 GTEX-ZA64-2026-SM-5PNXT 0 B1 2 pieces, minimal interstitial fat 8.2 Muscle Muscle - Skeletal 0011907 198 370 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.993221 162805 0.985031 0.993818 0.877343 20218 1 76 0.00271378 276 0 1.00978e+08 0.0147242 829834 1.01606e+08 2.84774e+06 20226 5.03576e+07 0 0.107687 0.993818 0.871919 1.00978e+08 0.00294917 2.1758e+07 1.57068e+07 2.18758e+07 286 2.17922e+07 2.00583e+07 0.00283141 2.18919e+07 50.114 0.00816716 0.994414 0 50.135 GTEX-ZA64-2126-SM-5Q5A8 0 B1 4 pieces, clean specimens; minute adherent nubbin of fat or vessel on 2; delineated 6.3 Nerve Nerve - Tibial 0001323 207 361 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989825 144671 0.971978 0.992517 0.791749 23038 1 76 0.00173139 175 0 7.1138e+07 0.0277275 353092 7.16744e+07 5.49689e+06 23067 3.5363e+07 0 0.180229 0.992517 0.785824 7.1138e+07 0.00280879 1.56695e+07 5.57608e+06 1.57723e+07 175 1.57398e+07 1.17628e+07 0.00226862 1.58892e+07 50.2363 0.00492634 0.995209 0 50.1635 GTEX-ZA64-2226-SM-5Q5A9 0 B1 4 pieces, up to 1mm adherent nubbins of fibrous tissue, delineated 7.4 Blood Vessel Artery - Tibial 0007610 208 360 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.99237 173095 0.978415 0.994255 0.869183 21086 1 76 0.00161567 169 0 7.2678e+07 0.0211387 291440 7.30979e+07 5.17695e+06 21096 3.6169e+07 0 0.109231 0.994255 0.86419 7.2678e+07 0.00265902 1.57182e+07 5.2024e+06 1.57923e+07 182 1.57424e+07 1.52234e+07 0.00213636 1.59025e+07 50.253 0.00398698 0.996141 0 50.1177 GTEX-ZAB4-0001-SM-4YUVZ C1 Blood Whole Blood 0013756 332 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZAB4-0001-SM-53IUX C1 Blood Whole Blood 0013756 332 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 LCSET-4316,LCSET-4842 01/21/2014 Standard Exome Sequencing v3 (ICE) WES GTEX-ZAB4-0001-SM-6UH36 C1 Blood Whole Blood 0013756 332 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZAB4-0005-SM-4RGM8 C1 6.9 Blood Whole Blood 0013756 332 BP-35552 RNA isolation_PAXgene Blood RNA (Manual) 01/29/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.966901 525125 0.980994 0.969445 0.827759 18651 1 76 0.0027066 142 0 1.00617e+08 0.0168417 316110 1.03788e+08 1.05697e+07 18654 4.99577e+07 0 0.153235 0.969445 0.802466 1.00617e+08 0.00358178 2.32193e+07 1.54293e+08 2.40721e+07 166 2.40872e+07 2.77703e+07 0.00314304 2.34644e+07 49.3452 0.00304572 0.971989 0 50.9016 GTEX-ZAB4-0008-SM-4RGM6 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 467 BP-36932 RNA isolation_Trizol Manual (Cell Pellet) 03/14/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990664 730360 0.972855 0.993363 0.840372 22215 1 76 0.00198927 232 0 9.54284e+07 0.026776 234575 9.6066e+07 8.95068e+06 22236 4.7474e+07 0 0.132483 0.993363 0.834794 9.54284e+07 0.00243829 2.11566e+07 1.55612e+07 2.13096e+07 252 2.13991e+07 2.25311e+07 0.00221317 2.13265e+07 49.9151 0.00244181 0.996062 0 50.1801 GTEX-ZAB4-0011-R10a-SM-4SOKH C1, A1 7.1 Brain Brain - Frontal Cortex (BA9) 0009834 337 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.991756 936548 0.953197 0.993611 0.827056 24268 1 76 0.00225958 372 0 9.01456e+07 0.0464444 3.85231e+06 9.07252e+07 4.74408e+06 24298 4.48401e+07 0 0.12614 0.993611 0.821772 9.01456e+07 0.00280244 1.95468e+07 2.11353e+07 1.97658e+07 337 1.96395e+07 1.08041e+07 0.0025305 1.98449e+07 50.2602 0.0424613 0.995466 0 50.2785 GTEX-ZAB4-0011-R11a-SM-4SOKI C1, A1 8.9 Brain Brain - Cerebellar Hemisphere 0002037 337 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989342 979707 0.934928 0.991638 0.701126 23837 1 76 0.00249884 157 0 7.83738e+07 0.0646747 1.05228e+06 7.90346e+07 4.22648e+06 23874 3.89278e+07 0 0.233802 0.991638 0.695263 7.83738e+07 0.00308352 1.66772e+07 1.7089e+07 1.68137e+07 178 1.68713e+07 9.38578e+06 0.0027905 1.68009e+07 49.8955 0.0133142 0.993934 0 50.2038 GTEX-ZAB4-0011-R1a-SM-4RGNO C1, A1 7.7 Brain Brain - Hippocampus 0001954 337 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990379 623751 0.961371 0.993062 0.834642 23018 1 76 0.00230364 167 0 6.41486e+07 0.0382554 3.02523e+06 6.45968e+07 5.60412e+06 23034 3.18812e+07 0 0.126729 0.993062 0.828851 6.41486e+07 0.00325839 1.40528e+07 1.07659e+07 1.42329e+07 186 1.41669e+07 7.95074e+06 0.00277972 1.42863e+07 50.2098 0.0468326 0.995744 0 50.3184 GTEX-ZAB4-0011-R2a-SM-4RGNP C1, A1 8.2 Brain Brain - Substantia nigra 0002038 337 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.990914 700649 0.959391 0.993369 0.815669 23238 1 76 0.00221375 169 0 6.91124e+07 0.0402174 2.28122e+06 6.95738e+07 6.07401e+06 23256 3.4369e+07 0 0.143721 0.993369 0.81026 6.91124e+07 0.00294927 1.51628e+07 1.06859e+07 1.53797e+07 184 1.53191e+07 9.92069e+06 0.0025806 1.5388e+07 50.1122 0.0327885 0.995823 0 50.355 GTEX-ZAB4-0011-R3a-SM-4RGNQ C1, A1 8.9 Brain Brain - Anterior cingulate cortex (BA24) 0009835 337 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 LCSET-3879 09/26/2013 TruSeq.v1 RNASEQ 0.992032 1.04481e+06 0.961003 0.993884 0.846387 24351 1 76 0.00225385 372 0 9.95706e+07 0.0384524 3.78911e+06 1.00183e+08 8.39269e+06 24374 4.95443e+07 0 0.114616 0.993884 0.84121 9.95706e+07 0.00280809 2.1696e+07 2.05685e+07 2.1919e+07 345 2.19045e+07 1.38052e+07 0.00253045 2.18999e+07 49.9947 0.0378218 0.995736 0 50.2557 GTEX-ZAB4-0011-R4a-SM-4SOKB C1, A1 6.2 Brain Brain - Amygdala 0001876 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.988194 712062 0.952887 0.990721 0.831276 22491 1 76 0.00236364 154 0 6.15913e+07 0.0468339 4.49506e+06 6.21681e+07 3.45589e+06 22504 3.06204e+07 0 0.121611 0.990721 0.823562 6.15913e+07 0.00293364 1.34139e+07 1.6769e+07 1.35884e+07 182 1.35219e+07 6.68554e+06 0.00264791 1.36318e+07 50.2024 0.0723048 0.993248 0 50.3232 GTEX-ZAB4-0011-R5a-SM-4SOKC C1, A1 8.2 Brain Brain - Caudate (basal ganglia) 0001873 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.991474 820689 0.947497 0.993684 0.805455 23916 1 76 0.00226361 158 0 7.25756e+07 0.0520828 2.89644e+06 7.30369e+07 3.91258e+06 23939 3.61067e+07 0 0.142042 0.993684 0.800368 7.25756e+07 0.00270387 1.56144e+07 2.02308e+07 1.58402e+07 200 1.58131e+07 9.46764e+06 0.00248325 1.58008e+07 49.9804 0.0396572 0.995895 0 50.359 GTEX-ZAB4-0011-R6a-SM-4SOKD C1, A1 6.8 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.989097 564895 0.957961 0.99245 0.824339 23222 1 76 0.00239234 162 0 6.28606e+07 0.0417841 4.13163e+06 6.33388e+07 3.4884e+06 23239 3.12326e+07 0 0.133622 0.99245 0.818115 6.28606e+07 0.00303038 1.37373e+07 1.47485e+07 1.3982e+07 187 1.39138e+07 6.64705e+06 0.00271028 1.40078e+07 50.1685 0.0652306 0.995802 0 50.4414 GTEX-ZAB4-0011-R7a-SM-4SOKE C1, A1 8.2 Brain Brain - Putamen (basal ganglia) 0001874 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995 09/19/2013 TruSeq.v1 RNASEQ 0.992224 561716 0.956088 0.994212 0.826786 23342 1 76 0.00226018 155 0 6.34228e+07 0.0435117 2.4602e+06 6.37921e+07 3.5095e+06 23355 3.15631e+07 0 0.129302 0.994212 0.822001 6.34228e+07 0.00274245 1.37958e+07 1.22764e+07 1.39555e+07 175 1.39158e+07 8.53845e+06 0.00250083 1.3964e+07 50.0863 0.0385659 0.9962 0 50.2878 GTEX-ZAB4-0011-R8b-SM-4SOKF C1, A1 7.5 Brain Brain - Hypothalamus 0001898 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.990532 854190 0.954926 0.99313 0.816027 24110 1 76 0.00220145 207 0 8.11026e+07 0.044798 4.01373e+06 8.16636e+07 4.28122e+06 24134 4.03162e+07 0 0.138899 0.99313 0.810421 8.11026e+07 0.00289861 1.77477e+07 1.88705e+07 1.79283e+07 255 1.78003e+07 9.31282e+06 0.00254912 1.80857e+07 50.3976 0.0491496 0.995729 0 50.2531 GTEX-ZAB4-0011-R9a-SM-4SOKG C1, A1 7.7 Brain Brain - Spinal cord (cervical c-1) 0006469 337 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-3995,LCSET-4215 10/13/2013 TruSeq.v1 RNASEQ 0.990238 737898 0.9553 0.992928 0.794515 24343 1 76 0.00208623 182 0 7.66748e+07 0.0443409 1.65335e+06 7.72209e+07 4.06826e+06 24367 3.80994e+07 0 0.160785 0.992928 0.788896 7.66748e+07 0.00274849 1.6846e+07 1.5736e+07 1.70594e+07 202 1.69762e+07 1.13686e+07 0.00241646 1.71435e+07 50.2451 0.0214107 0.995618 0 50.3148 GTEX-ZAB4-0126-SM-5CVMG 1 C1 2 pieces. Reduced spermatogenesis 5.9 Testis Testis 0000473 463 536 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984783 297288 0.942143 0.988516 0.717868 32461 1 76 0.00522954 133 0 7.49199e+07 0.0576132 1.55939e+06 7.57903e+07 1.49534e+07 32508 3.71801e+07 0 0.224275 0.988516 0.709624 7.49199e+07 0.00705804 1.60117e+07 1.13087e+07 1.604e+07 142 1.61184e+07 9.60421e+06 0.00614034 1.61852e+07 50.1034 0.0205751 0.992248 0 50.0443 GTEX-ZAB4-0226-SM-5N9F5 1 C1 6 pieces. Well trimmed. 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 465 535 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.98687 336805 0.972657 0.988352 0.796985 24362 1 76 0.00414159 231 0 9.40088e+07 0.027123 710682 9.51167e+07 5.11854e+06 24394 4.66905e+07 0 0.175672 0.988352 0.787702 9.40088e+07 0.0043511 2.06854e+07 9.57516e+06 2.08351e+07 240 2.07522e+07 1.50419e+07 0.00424619 2.09101e+07 50.1895 0.00747168 0.989835 0 50.1802 GTEX-ZAB4-0426-SM-5HL7N 2 C1 2 pieces. 10% internal adipose 8.1 Muscle Muscle - Skeletal 0011907 489 512 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990106 235901 0.980111 0.992934 0.85177 20941 1 76 0.00197375 208 0 8.34384e+07 0.0196514 646372 8.40321e+07 8.00067e+06 20956 4.15242e+07 0 0.128341 0.992934 0.845751 8.34384e+07 0.00289974 1.80691e+07 9.65038e+06 1.82384e+07 243 1.82037e+07 1.6872e+07 0.00243543 1.83191e+07 50.158 0.00769196 0.995761 0 50.2331 GTEX-ZAB4-0526-SM-5HL7Z 2 C1 6 pieces. Mostly well trimmed 7.6 Blood Vessel Artery - Aorta 0001496 494 508 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989872 218441 0.975918 0.992484 0.82035 22360 1 76 0.00224709 162 0 7.4441e+07 0.0234308 245400 7.50047e+07 6.83015e+06 22373 3.70062e+07 0 0.155567 0.992484 0.814185 7.4441e+07 0.00332111 1.6095e+07 6.5769e+06 1.62613e+07 168 1.62649e+07 1.46147e+07 0.00278269 1.62782e+07 50.0203 0.0032718 0.995097 0 50.2569 GTEX-ZAB4-0626-SM-5CVN3 3 C1 2 pieces. Extensive alveolar hemorrhage. Emphysema. 6.9 Lung Lung 0008952 497 505 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.982467 349032 0.976373 0.987252 0.771521 24104 1 76 0.00539492 117 0 6.65804e+07 0.0223255 317038 6.74401e+07 1.20269e+07 24121 3.29558e+07 0 0.204852 0.987252 0.761686 6.65804e+07 0.00779278 1.47526e+07 9.4093e+06 1.49289e+07 127 1.50178e+07 1.13968e+07 0.00658804 1.49722e+07 49.924 0.00470103 0.992038 0 50.2971 GTEX-ZAB4-0726-SM-5HL8I 1 C1 2 pieces. Uniform plaques, not severe. 7.2 Blood Vessel Artery - Coronary 0001621 501 502 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988178 235523 0.972351 0.99122 0.79203 22691 1 76 0.00220861 139 0 6.44417e+07 0.0273343 155182 6.50125e+07 6.12176e+06 22710 3.20314e+07 0 0.180322 0.99122 0.785075 6.44417e+07 0.00333841 1.39184e+07 5.39972e+06 1.4053e+07 144 1.40566e+07 1.18549e+07 0.00277178 1.41016e+07 50.0799 0.00238695 0.994262 0 50.2406 GTEX-ZAB4-0826-SM-5LU9D 2 C1 2 pieces. Extensive central passive congestion and hemorrhage. Large vessels and stroma occupy 10% and 20%. 5.7 Liver Liver 0001114 503 501 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.990075 309362 0.969002 0.99185 0.776333 21796 1 76 0.00480387 123 0 6.4599e+07 0.0308011 1.18436e+06 6.51299e+07 5.37127e+06 21816 3.2123e+07 0 0.192669 0.99185 0.770006 6.4599e+07 0.00406124 1.41938e+07 1.21044e+07 1.42958e+07 149 1.42756e+07 8.04862e+06 0.00443322 1.43286e+07 50.0927 0.0181846 0.993625 0 50.1791 GTEX-ZAB4-0926-SM-5CVN4 1 C1 2 pieces. Hypertrophied fibers. 7.5 Heart Heart - Atrial Appendage 0006631 504 500 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983599 250621 0.977876 0.989144 0.82445 22006 1 76 0.00495927 128 0 7.80985e+07 0.0218143 1.72537e+06 7.89557e+07 1.57132e+07 22021 3.87005e+07 0 0.153426 0.989144 0.8155 7.80985e+07 0.00781921 1.63037e+07 9.89648e+06 1.64248e+07 162 1.64836e+07 1.27971e+07 0.00638122 1.66246e+07 50.2129 0.0218523 0.994689 0 50.185 GTEX-ZAB4-1026-SM-5HL7T 1 C1 2 pieces. Hypertrophied fibers. 6.9 Heart Heart - Left Ventricle 0006566 506 499 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990021 254127 0.980685 0.993231 0.836483 21571 1 76 0.00233923 195 0 7.87737e+07 0.0191448 2.07283e+06 7.93106e+07 6.65359e+06 21588 3.91824e+07 0 0.144203 0.993231 0.83082 7.87737e+07 0.00337259 1.7442e+07 1.48081e+07 1.76251e+07 250 1.77269e+07 1.04904e+07 0.00285424 1.75731e+07 49.782 0.0261356 0.99644 0 50.2611 GTEX-ZAB4-1126-SM-5HL86 1 C1 6 pieces. well trimmed. 7.1 Esophagus Esophagus - Mucosa 0006920 507 498 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987607 346413 0.969928 0.991199 0.745789 23329 1 76 0.00223672 132 0 6.58732e+07 0.0297875 167341 6.64581e+07 6.13355e+06 23353 3.27312e+07 0 0.224139 0.991199 0.739225 6.58732e+07 0.00351675 1.46397e+07 8.57091e+06 1.47388e+07 136 1.48059e+07 1.1773e+07 0.00287442 1.48012e+07 49.9921 0.00251799 0.994791 0 50.1687 GTEX-ZAB4-1226-SM-5CVN5 1 C1 6 pieces. Well trimmed except for 3 mucosal remnants (marked) 5.9 Esophagus Esophagus - Muscularis 0004648 508 498 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984081 225764 0.965006 0.988282 0.764736 24136 1 76 0.00500179 124 0 6.59017e+07 0.0348025 637499 6.66831e+07 1.24614e+07 24164 3.26728e+07 0 0.200269 0.988282 0.755776 6.59017e+07 0.00741259 1.41161e+07 7.58928e+06 1.42128e+07 137 1.42391e+07 9.3414e+06 0.00620206 1.43518e+07 50.1972 0.00956013 0.992484 0 50.1706 GTEX-ZAB4-1426-SM-5CVN6 1 C1 2 pieces. 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 516 491 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.982564 254512 0.975489 0.986052 0.758696 24727 1 76 0.006062 141 0 8.54233e+07 0.0209561 262463 8.66316e+07 1.61844e+07 24758 4.22416e+07 0 0.216793 0.986052 0.748114 8.54233e+07 0.00791247 1.91513e+07 1.97897e+07 1.92737e+07 156 1.93612e+07 1.44877e+07 0.00698396 1.93561e+07 49.9934 0.00302964 0.989539 0 50.1592 GTEX-ZAB4-1526-SM-5CVN7 3 C1 6 pieces. Mucosa=3; muscle = 2. 6.1 Stomach Stomach 0000945 518 489 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.964565 189535 0.980499 0.969414 0.851035 22058 1 76 0.00477445 325 0 7.21653e+07 0.0185926 600332 7.44422e+07 1.55098e+07 22075 3.57401e+07 0 0.129463 0.969414 0.825006 7.21653e+07 0.00735967 1.65198e+07 1.11976e+08 1.70376e+07 214 1.70454e+07 2.07298e+07 0.0060606 1.68632e+07 49.7313 0.0080644 0.974263 0 50.7716 GTEX-ZAB4-1726-SM-5HL8C 2 C1 2 pieces. Well trimmed. 7 Pancreas Pancreas 0001150 523 485 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989751 230222 0.973189 0.99247 0.82448 21540 1 76 0.00226992 107 0 6.66554e+07 0.0264935 237931 6.71611e+07 6.2719e+06 21558 3.31599e+07 0 0.148709 0.99247 0.818272 6.66554e+07 0.00333715 1.5148e+07 1.79393e+07 1.54073e+07 112 1.54025e+07 1.81955e+07 0.00280207 1.53298e+07 49.8818 0.00354269 0.99519 0 50.4244 GTEX-ZAB4-1826-SM-5HL8O 1 C1 2 pieces. Well trimmed. Small amount of peripheral fat. 6.8 Nerve Nerve - Tibial 0001323 526 483 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989209 209335 0.965347 0.991904 0.728382 23621 1 76 0.00222534 151 0 7.16413e+07 0.0344421 316324 7.2226e+07 6.63613e+06 23656 3.56301e+07 0 0.236964 0.991904 0.722486 7.16413e+07 0.00317435 1.57057e+07 7.64478e+06 1.58081e+07 157 1.58054e+07 1.05783e+07 0.00269856 1.58920e+07 50.1367 0.00437964 0.9946 0 50.1625 GTEX-ZAB4-1926-SM-57WD8 1 C1 2 pieces. Well trimmed. Minimal intimal thickening. 8.3 Blood Vessel Artery - Tibial 0007610 527 483 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989826 478264 0.970805 0.992707 0.822083 20328 1 76 0.00191884 128 0 5.5689e+07 0.0288311 208437 5.60981e+07 6.64106e+06 20341 2.76731e+07 0 0.148722 0.992707 0.816087 5.5689e+07 0.00366941 1.19364e+07 5.69765e+06 1.20364e+07 132 1.20409e+07 1.05302e+07 0.00279159 1.20894e+07 50.1006 0.00371558 0.995589 0 50.2086 GTEX-ZAB4-2126-SM-5HL8U 1 C1 6 pieces. Well trimmed. 6.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 533 478 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.98889 259654 0.969991 0.991977 0.72914 23157 1 76 0.00229067 159 0 6.93382e+07 0.0298021 504034 6.9899e+07 6.63039e+06 23195 3.44766e+07 0 0.240851 0.991977 0.72329 6.93382e+07 0.00330894 1.51671e+07 9.03145e+06 1.53054e+07 153 1.53287e+07 9.93018e+06 0.00279822 1.53507e+07 50.0358 0.00721089 0.995064 0 50.2268 GTEX-ZAB4-2226-SM-5HL97 3 C1 6 pieces. Full thickness with 3 having pericolonic adipose up to 1 mm. Mucosa=3; muscle=1. 6 Colon Colon - Transverse 0001157 546 465 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.985421 268228 0.968614 0.989257 0.789223 23899 1 76 0.0025373 135 0 6.26637e+07 0.0296646 266713 6.33442e+07 5.60507e+06 23918 3.10635e+07 0 0.179391 0.989257 0.780744 6.26637e+07 0.00392785 1.36563e+07 7.92949e+06 1.37363e+07 145 1.37719e+07 1.0311e+07 0.00322988 1.38487e+07 50.1391 0.00421054 0.993093 0 50.1461 GTEX-ZAB4-2426-SM-5HL8A 1 C1 6 pieces. Well trimmed muscle. 6.3 Colon Colon - Sigmoid 0001159 553 459 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987358 299707 0.973019 0.991029 0.779646 23778 1 76 0.00229253 148 0 7.15439e+07 0.0263761 290067 7.21915e+07 6.88337e+06 23803 3.55183e+07 0 0.193372 0.991029 0.772652 7.15439e+07 0.00353301 1.56008e+07 7.16538e+06 1.56707e+07 161 1.56913e+07 1.20725e+07 0.00291047 1.58314e+07 50.2223 0.00401802 0.994701 0 50.1118 GTEX-ZAB4-2526-SM-5HL8M 1 C1 2 pieces. Largely fibroadipose. Rare duct (marked). 7.6 Breast Breast - Mammary Tissue 0008367 553 465 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.980452 327740 0.976629 0.983407 0.829931 22776 1 76 0.00207746 168 0 7.49974e+07 0.0230473 527913 7.62628e+07 6.60426e+06 22795 3.72948e+07 0 0.146698 0.983407 0.81616 7.49974e+07 0.00319796 1.64062e+07 9.79104e+06 1.6538e+07 173 1.65625e+07 1.54193e+07 0.00263603 1.65967e+07 50.0515 0.00692228 0.986362 0 50.2 GTEX-ZAB4-2926-SM-57WCV 2 C1 4 pieces. 7.7 Brain Brain - Cerebellum 0002037 587 432 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.988979 572529 0.94657 0.991636 0.738077 24211 1 76 0.0023183 200 0 8.66242e+07 0.0530624 1.30822e+06 8.73548e+07 1.06971e+07 24237 4.30689e+07 0 0.208493 0.991636 0.731903 8.66242e+07 0.0039684 1.87224e+07 1.6062e+07 1.88093e+07 238 1.88659e+07 1.06837e+07 0.00314114 1.88742e+07 50.011 0.014976 0.994292 0 50.1158 GTEX-ZAB4-3126-SM-57WCJ 2 C1 1 piece 7.2 Pituitary Pituitary 0000007 590 430 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987534 565579 0.953967 0.99075 0.759004 24680 1 76 0.00206466 138 0 6.95915e+07 0.0457822 271834 7.02412e+07 8.23681e+06 24712 3.45905e+07 0 0.194963 0.99075 0.751983 6.95915e+07 0.004259 1.4689e+07 1.44414e+07 1.48271e+07 153 1.48759e+07 1.07043e+07 0.00315827 1.48573e+07 49.9688 0.00387001 0.993965 0 50.234 GTEX-ZAB5-0004-SM-4YUWZ B1 Blood Whole Blood 0013756 -42 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZAB5-0004-SM-53UBI B1 Blood Whole Blood 0013756 -42 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZAB5-0004-SM-6UH3A B1 Blood Whole Blood 0013756 -42 BP-35489 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/28/2013 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZAB5-0126-SM-5CVMT 0 B1 2 pieces; one approximately 10% adipose tissue, the other with scant adipose tissue. Few collections of chronic inflammatory cells. 8.4 Heart Heart - Atrial Appendage 0006631 168 666 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986614 194459 0.978071 0.991008 0.84026 22165 1 76 0.00457824 155 0 7.38286e+07 0.0216023 1.70346e+06 7.44984e+07 1.38352e+07 22182 3.66373e+07 0 0.13781 0.991008 0.832705 7.38286e+07 0.00717246 1.59236e+07 1.18466e+07 1.59166e+07 172 1.58612e+07 1.17788e+07 0.0058696 1.62515e+07 50.6077 0.0228656 0.995403 0 49.989 GTEX-ZAB5-0226-SM-5CVMH 0 B1 2 pieces, one with ~10% adipose tissue. contraction bands noted 7.5 Heart Heart - Left Ventricle 0006566 166 669 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.98736 259907 0.983911 0.990801 0.855506 20846 1 76 0.00458422 195 0 8.00614e+07 0.0158509 2.1773e+06 8.08047e+07 1.48566e+07 20856 3.97655e+07 0 0.128405 0.990801 0.847637 8.00614e+07 0.00649071 1.76549e+07 1.82116e+07 1.75809e+07 224 1.74928e+07 1.30044e+07 0.00553416 1.79636e+07 50.6639 0.0269452 0.994242 0 49.895 GTEX-ZAB5-0426-SM-5CVMI 0 B1 2 pieces; diffuse macrovesicular steatosis involving about %60 of the liver parenchyma, few collections of chronic inflammatory cells 7.8 Liver Liver 0001114 177 659 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986805 319553 0.978609 0.990351 0.844754 22143 1 76 0.00454765 152 0 8.76332e+07 0.0211747 587345 8.8487e+07 1.57542e+07 22161 4.35231e+07 0 0.133855 0.990351 0.836604 8.76332e+07 0.00667276 1.88873e+07 1.40835e+07 1.8804e+07 179 1.88772e+07 1.96211e+07 0.0056064 1.90966e+07 50.289 0.00663764 0.993898 0 49.8895 GTEX-ZAB5-0526-SM-5CVMU 0 B1 2 pieces, capsule present on one piece (should be 5mm beneath capsule) 7.4 Spleen Spleen 0002106 177 659 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.982498 326550 0.963476 0.987111 0.756815 24702 1 76 0.00544592 131 0 7.47958e+07 0.0347569 335823 7.57725e+07 1.57299e+07 24735 3.70211e+07 0 0.206661 0.987111 0.74706 7.47958e+07 0.0075639 1.64557e+07 1.5406e+07 1.65445e+07 142 1.66661e+07 1.15633e+07 0.00649996 1.66659e+07 49.9997 0.00443199 0.991723 0 50.1346 GTEX-ZAB5-0626-SM-5PNVB 0 B1 2 pieces; few collections of chronic inflammatory cells and numerous hemosiderin-laden macrophages. 7.4 Lung Lung 0008952 181 656 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.99238 206828 0.972764 0.993905 0.782712 23154 1 76 0.00204913 121 0 5.70414e+07 0.0267711 259498 5.73913e+07 5.48632e+06 23178 2.84017e+07 0 0.190051 0.993905 0.777941 5.70414e+07 0.0030989 1.2612e+07 5.16281e+06 1.27639e+07 133 1.27485e+07 9.3812e+06 0.00257321 1.2712e+07 49.9284 0.00452156 0.99543 0 50.2994 GTEX-ZAB5-0726-SM-5P9JG 0 B1 2 pieces, ~5-10% attached fat and larger vessels, both pieces. 6.3 Thyroid Thyroid 0002046 191 647 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4916 03/27/2014 TruSeq.v1 RNASEQ 0.987287 234826 0.963566 0.987897 0.72759 25917 1 76 0.0032424 207 0 1.01496e+08 0.0361346 527173 1.02739e+08 3.42044e+06 25976 5.0534e+07 0 0.235976 0.987897 0.718784 1.01496e+08 0.00362166 2.21832e+07 8.85492e+06 2.23154e+07 245 2.22479e+07 1.52197e+07 0.00343191 2.23101e+07 50.0697 0.00513117 0.988507 0 50.1486 GTEX-ZAB5-0826-SM-5P9FU 1 B1 2 pieces, both with up to 30% adipose tissue (internal and attached), saponification 6.7 Pancreas Pancreas 0001150 193 644 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.992694 302402 0.975959 0.99305 0.811217 23302 1 76 0.00294049 133 0 1.03443e+08 0.0238641 193223 1.04167e+08 3.43624e+06 23338 5.15182e+07 0 0.164742 0.99305 0.805578 1.03443e+08 0.00361983 2.35348e+07 2.60058e+07 2.39337e+07 156 2.3831e+07 2.82089e+07 0.00328004 2.3686e+07 49.8474 0.00185493 0.993405 0 50.4202 GTEX-ZAB5-0926-SM-5CVMV 0 B1 6 pieces, esophagitis with erosion 7.8 Esophagus Esophagus - Mucosa 0006920 195 644 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.986399 188449 0.975461 0.990261 0.809709 23389 1 76 0.00476798 139 0 6.84426e+07 0.0241879 446924 6.91157e+07 1.38662e+07 23400 3.39715e+07 0 0.165752 0.990261 0.801823 6.84426e+07 0.00666104 1.52445e+07 8.80438e+06 1.53444e+07 142 1.53855e+07 1.21983e+07 0.00571082 1.54538e+07 50.1108 0.00646632 0.994123 0 50.1633 GTEX-ZAB5-1026-SM-5HL91 0 B1 6 pieces, well-trimmed 8.4 Esophagus Esophagus - Muscularis 0004648 197 643 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990971 198941 0.975315 0.993173 0.846905 21494 1 76 0.00186792 164 0 6.93401e+07 0.0243927 460985 6.98167e+07 6.22498e+06 21509 3.45237e+07 0 0.12841 0.993173 0.841123 6.93401e+07 0.00273058 1.49145e+07 5.68114e+06 1.49771e+07 171 1.49461e+07 1.33224e+07 0.00229829 1.50845e+07 50.2304 0.00660279 0.995374 0 50.1046 GTEX-ZAB5-1126-SM-5Q5AD 1 B1 2 pieces, essentially all fat, limited fibrous tissue/small vessels 6.9 Adipose Tissue Adipose - Visceral (Omentum) 0010414 203 637 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.989587 234916 0.974536 0.992688 0.820874 23205 1 76 0.00169148 167 0 7.57723e+07 0.0251648 792460 7.63304e+07 6.04923e+06 23226 3.76603e+07 0 0.153662 0.992688 0.814872 7.57723e+07 0.00286509 1.66067e+07 7.37328e+06 1.67727e+07 199 1.67427e+07 1.26819e+07 0.00227645 1.68573e+07 50.1706 0.010382 0.995789 0 50.2486 GTEX-ZAB5-1226-SM-5P9FY 1 B1 6 pieces, 3 with mucosa (not target) and no muscle (target), 3 comprised of muscle 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 206 635 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4914 03/27/2014 TruSeq.v1 EXCLUDE 0.991737 233238 0.97028 0.991854 0.774201 25562 1 76 0.0030336 281 0 1.06449e+08 0.029086 545807 1.07323e+08 3.70196e+06 25596 5.29783e+07 0 0.196079 0.991854 0.767895 1.06449e+08 0.00365908 2.36951e+07 1.22411e+07 2.38796e+07 276 2.37988e+07 1.87716e+07 0.0033463 2.37935e+07 49.9944 0.00508563 0.991972 0 50.1938 GTEX-ZAB5-1426-SM-5HL9D 1 B1 6 pieces, 5 of 6 contain mucosa (not target), muscularis (target) present in 4 8 Colon Colon - Sigmoid 0001159 210 632 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990768 215011 0.975031 0.993378 0.835085 21904 1 76 0.00187698 176 0 6.77271e+07 0.0246522 517937 6.81785e+07 5.95561e+06 21923 3.3703e+07 0 0.139946 0.993378 0.829556 6.77271e+07 0.00279115 1.47436e+07 6.40687e+06 1.47648e+07 169 1.47649e+07 1.24891e+07 0.00233286 1.49068e+07 50.239 0.00759678 0.995989 0 50.0358 GTEX-ZAB5-1526-SM-5HL9P 0 B1 6 pieces, all containing muscularis (not target), lymphoid nodules demarcated 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 213 630 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991097 186081 0.977034 0.993247 0.84985 21974 1 76 0.00186183 178 0 6.76578e+07 0.022613 509249 6.81178e+07 5.8645e+06 21990 3.36877e+07 0 0.127185 0.993247 0.844111 6.76578e+07 0.00270932 1.481e+07 5.78484e+06 1.48743e+07 169 1.48637e+07 1.30005e+07 0.00228466 1.49536e+07 50.1508 0.00747601 0.995398 0 50.1083 GTEX-ZAB5-1826-SM-5HL7C 0 B1 6 pieces, 3 with up to 10% adipose tissue 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 223 621 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.99008 212669 0.970114 0.992645 0.768257 23623 1 76 0.00203664 161 0 6.67612e+07 0.0296962 442531 6.72558e+07 5.91096e+06 23653 3.32028e+07 0 0.201857 0.992645 0.762607 6.67612e+07 0.00317478 1.45251e+07 6.48886e+06 1.46094e+07 157 1.45939e+07 1.03976e+07 0.00260424 1.47021e+07 50.1846 0.00657982 0.995211 0 50.1446 GTEX-ZAB5-1926-SM-5HL7O 0 B1 2 pieces, each with a rim of adipose tissue, up to 1.4mm in thickness on one. Fat comprises ~15% of one piece and ~35% of the other. 7.2 Nerve Nerve - Tibial 0001323 227 618 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 EXCLUDE 0.990719 236068 0.977892 0.993291 0.800852 22650 1 76 0.00194372 160 0 7.66472e+07 0.0218464 181767 7.7165e+07 6.62886e+06 22670 3.81284e+07 0 0.177041 0.993291 0.795478 7.66472e+07 0.0030055 1.70517e+07 7.00944e+06 1.70964e+07 175 1.71041e+07 1.434e+07 0.00247324 1.72330e+07 50.1878 0.00235556 0.995862 0 50.0656 GTEX-ZAB5-2026-SM-5L3EQ 1 B1 2 pieces, well-trimmed 7 Blood Vessel Artery - Tibial 0007610 228 617 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.986584 228481 0.975088 0.990947 0.832086 20916 1 76 0.00301054 150 0 6.9198e+07 0.0244708 396782 6.98302e+07 6.9204e+06 20928 3.43461e+07 0 0.143002 0.990947 0.824553 6.9198e+07 0.00432253 1.48002e+07 5.24565e+06 1.48769e+07 153 1.49211e+07 1.36683e+07 0.00366365 1.50338e+07 50.1882 0.00568209 0.995309 0 50.1292 GTEX-ZAB5-2126-SM-5K7UN 0 B1 2 pieces, one with ~10% internal adipose tissue, the second with 10-20% internal adipose tissue 8 Muscle Muscle - Skeletal 0011907 236 610 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.988807 211983 0.984279 0.991139 0.87682 20045 1 76 0.00407606 208 0 9.14395e+07 0.015426 1.36813e+06 9.2257e+07 5.89895e+06 20053 4.5499e+07 0 0.10746 0.991139 0.86905 9.14395e+07 0.00444708 1.9734e+07 1.01713e+07 1.98847e+07 243 1.99018e+07 1.87514e+07 0.00426114 1.99103e+07 50.0106 0.0148296 0.99347 0 50.1901 GTEX-ZAB5-2326-SM-5IJFR 1 B1 2 pieces, well-trimmed 7.2 Salivary Gland Minor Salivary Gland 0006330 248 599 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.98489 438743 0.965415 0.986845 0.779831 23938 1 76 0.00465735 139 0 8.15955e+07 0.034365 254632 8.26832e+07 5.39632e+06 23960 4.05612e+07 0 0.185584 0.986845 0.769572 8.15955e+07 0.00498318 1.80819e+07 1.83201e+07 1.82792e+07 160 1.83122e+07 1.42062e+07 0.00481994 1.82132e+07 49.8645 0.00307961 0.9888 0 50.2713 GTEX-ZAB5-2426-SM-5CVMW 1 B1 2 pieces, spermatogenesis present 6.3 Testis Testis 0000473 254 593 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985227 250139 0.918441 0.989233 0.708054 32459 1 76 0.00484032 131 0 6.96916e+07 0.0812559 677760 7.04501e+07 1.21823e+07 32518 3.45864e+07 0 0.210387 0.989233 0.700431 6.96916e+07 0.00675873 1.42181e+07 1.08209e+07 1.42326e+07 125 1.43252e+07 1.06771e+07 0.00579564 1.43718e+07 50.0812 0.00962043 0.99324 0 50.0256 GTEX-ZAB5-2626-SM-5KM3Y 1 B1 6 pieces, all with small amounts of attached adipose tissue, up to 10% 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 262 586 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4821 03/23/2014 TruSeq.v1 EXCLUDE 0.988305 213277 0.974629 0.990438 0.819408 23177 1 76 0.00304767 156 0 6.94976e+07 0.0251073 412007 7.01685e+07 4.43465e+06 23197 3.45708e+07 0 0.155221 0.990438 0.811573 6.94976e+07 0.00404619 1.52723e+07 6.40414e+06 1.53489e+07 159 1.53559e+07 1.27151e+07 0.00354585 1.54109e+07 50.0894 0.00587168 0.992571 0 50.125 GTEX-ZAB5-2726-SM-5J2NH 1 B1 3 pieces, two of artery with narrowing of the lumen due to atheroma, both have small amount of attached adipose tissue. Small fragments of nerve also present. 7.5 Blood Vessel Artery - Coronary 0001621 278 570 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.984541 172307 0.981758 0.988623 0.85863 21260 1 76 0.00400941 156 0 7.75802e+07 0.0180304 2.34435e+06 7.8473e+07 4.21599e+06 21274 3.85175e+07 0 0.123128 0.988623 0.848861 7.75802e+07 0.00588298 1.69495e+07 1.19357e+07 1.72185e+07 200 1.70736e+07 1.12572e+07 0.00494233 1.73675e+07 50.4267 0.0298747 0.992704 0 50.3936 GTEX-ZAJG-0001-SM-4YUUW C1 Blood Whole Blood 0013756 534 BP-35551 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/29/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZAJG-0001-SM-53IUC C1 Blood Whole Blood 0013756 534 BP-35551 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/29/2013 LCSET-4316 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZAJG-0001-SM-6UH3R C1 Blood Whole Blood 0013756 534 BP-35551 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/29/2013 LCSET-6235 10/01/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZAJG-0011-R10a-SM-AHZMG C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 538 ChIP-Seq GTEX-ZAJG-0011-R10a-SM-CYKQ1 C1, A1 8.2 Brain Brain - Frontal Cortex (BA9) 0009834 538 BP-41079 RNA isolation_PAXgene Tissue miRNA 07/19/2013 RIP-Seq GTEX-ZAJG-0126-SM-5HL94 0 C1 6 pieces. Squamous epithelium is ~3% of thickness. Minimal dermal fat 6.5 Skin Skin - Sun Exposed (Lower leg) 0004264 724 625 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989481 221103 0.974157 0.99207 0.772321 22035 1 76 0.00248672 145 0 6.18781e+07 0.025678 494495 6.23727e+07 5.32089e+06 22056 3.07823e+07 0 0.201836 0.99207 0.766196 6.18781e+07 0.00367078 1.35525e+07 6.78227e+06 1.36612e+07 145 1.36352e+07 9.33968e+06 0.0030772 1.37328e+07 50.1782 0.00792807 0.994659 0 50.1999 GTEX-ZAJG-0226-SM-5HL81 0 C1 2 pieces, ~10% fibrous tissue, rep. areas delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 726 623 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988189 260732 0.977316 0.991497 0.776066 23188 1 76 0.00262521 169 0 8.31033e+07 0.0223538 544769 8.3816e+07 7.96376e+06 23223 4.13079e+07 0 0.201249 0.991497 0.769468 8.31033e+07 0.00373323 1.81943e+07 9.01671e+06 1.83576e+07 193 1.84097e+07 1.36492e+07 0.00317737 1.84006e+07 49.9876 0.00649958 0.994805 0 50.2234 GTEX-ZAJG-0526-SM-5S2MT 0 C1 2 pieces, ~10% interstitial fat, rep areas delineated 8.4 Muscle Muscle - Skeletal 0011907 731 620 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993937 350768 0.981227 0.995352 0.861044 18774 1 76 0.00195159 146 0 6.88651e+07 0.0185643 641654 6.91867e+07 4.74406e+06 18783 3.43019e+07 0 0.120184 0.995352 0.857042 6.88651e+07 0.00277204 1.47977e+07 8.28385e+06 1.49674e+07 156 1.49129e+07 1.47061e+07 0.00236123 1.49395e+07 50.0446 0.00927424 0.996768 0 50.2851 GTEX-ZAJG-0526-SM-CYKPH 0 C1 2 pieces, ~10% interstitial fat, rep areas delineated 8.4 Muscle Muscle - Skeletal 0011907 731 620 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 RIP-Seq GTEX-ZAJG-0626-SM-5HL8X 0 C1 2 pieces, fibrocystic changes. TDLUs, dilated ducts delineated (rep) 6.9 Breast Breast - Mammary Tissue 0008367 750 601 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987858 268011 0.974486 0.991326 0.757703 23956 1 76 0.00254017 139 0 6.73544e+07 0.0249901 317003 6.79438e+07 6.09287e+06 23986 3.3456e+07 0 0.216783 0.991326 0.75113 6.73544e+07 0.00374134 1.47732e+07 7.40343e+06 1.49134e+07 144 1.49505e+07 1.19021e+07 0.00313865 1.4961e+07 50.0176 0.00466567 0.994794 0 50.2361 GTEX-ZAJG-0726-SM-5HL9A 0 C1 2 pieces, incidental 1mm cyst, delineated 6.9 Thyroid Thyroid 0002046 786 566 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988494 235999 0.966701 0.991744 0.745297 23332 1 76 0.00231998 133 0 6.61569e+07 0.0330368 368801 6.67076e+07 5.75582e+06 23350 3.28797e+07 0 0.221403 0.991744 0.739144 6.61569e+07 0.00342901 1.44678e+07 7.47302e+06 1.45331e+07 139 1.45749e+07 1.14226e+07 0.00287268 1.46342e+07 50.1015 0.00552862 0.994994 0 50.1125 GTEX-ZAJG-0826-SM-5PNVA 1 C1 2 pieces, mild-moderate interstitial fibrosis, mild ischemic changes 6.4 Heart Heart - Left Ventricle 0006566 788 564 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4917 03/27/2014 TruSeq.v1 RNASEQ 0.993205 163268 0.976448 0.9945 0.839624 21306 1 76 0.00277489 153 0 7.10159e+07 0.0234113 5.28373e+06 7.14087e+07 6.26113e+06 21322 3.53909e+07 0 0.136825 0.9945 0.835006 7.10159e+07 0.00377716 1.56834e+07 9.48806e+06 1.57452e+07 191 1.56441e+07 8.8547e+06 0.00327537 1.58669e+07 50.3535 0.0739928 0.995795 0 50.0984 GTEX-ZAJG-0926-SM-5Q5AB 1 C1 2 pieces 5.9 Heart Heart - Atrial Appendage 0006631 790 563 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.9916 175828 0.976388 0.993676 0.808865 22267 1 76 0.00260311 150 0 7.0494e+07 0.0234457 4.06195e+06 7.09427e+07 4.94479e+06 22287 3.50838e+07 0 0.167523 0.993676 0.80375 7.0494e+07 0.00368707 1.52878e+07 8.87822e+06 1.53187e+07 176 1.52353e+07 9.20266e+06 0.00314396 1.55005e+07 50.4315 0.0572568 0.995752 0 50.0505 GTEX-ZAJG-1226-SM-5S2MH 1 C1 6 pieces, adherent serosa, ~0.5mm 7.2 Blood Vessel Artery - Aorta 0001496 801 554 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990714 413715 0.974168 0.992508 0.784513 21218 1 76 0.00218095 131 0 5.7486e+07 0.0252265 150899 5.79199e+07 4.14896e+06 21233 2.85436e+07 0 0.189655 0.992508 0.778636 5.7486e+07 0.00326282 1.24857e+07 7.31941e+06 1.26423e+07 140 1.26132e+07 9.80975e+06 0.00272091 1.26217e+07 50.017 0.0026053 0.994302 0 50.3115 GTEX-ZAJG-1326-SM-5S2NV 1 C1 6 pieces, squamous mucosa ~10-20% thickness, occasional submucosal mucus glands, rep. ones delineated 7.6 Esophagus Esophagus - Mucosa 0006920 805 550 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988,LCSET-5338 04/10/2014 TruSeq.v1 RNASEQ 0.99155 438279 0.966079 0.993414 0.773873 22827 1 76 0.00199974 148 0 7.37882e+07 0.0337264 387655 7.42774e+07 4.5971e+06 22849 3.66928e+07 0 0.192207 0.993414 0.768776 7.37882e+07 0.00280944 1.62799e+07 1.07944e+07 1.64225e+07 170 1.63573e+07 1.19089e+07 0.00240383 1.64887e+07 50.2 0.00521902 0.995278 0 50.2181 GTEX-ZAJG-1526-SM-5CVML 0 C1 6 pieces; squamous epithelium is ~60 microns thick 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 811 546 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.983397 191714 0.975118 0.988738 0.775583 24297 1 76 0.00509019 134 0 6.34593e+07 0.0246417 365755 6.41821e+07 1.2174e+07 24324 3.14421e+07 0 0.199535 0.988738 0.766848 6.34593e+07 0.00786539 1.38642e+07 7.69275e+06 1.39809e+07 123 1.40814e+07 1.10193e+07 0.00647029 1.40907e+07 50.0166 0.00569871 0.994079 0 50.2096 GTEX-ZAJG-1626-SM-5HL7I 1 C1 2 pieces, one is ~10% fibrous tissue, rep foci delineated. 6.5 Adipose Tissue Adipose - Visceral (Omentum) 0010414 812 545 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990137 237300 0.976959 0.992962 0.800288 22597 1 76 0.00228953 137 0 6.6772e+07 0.0226422 302747 6.72452e+07 5.4523e+06 22620 3.3198e+07 0 0.176672 0.992962 0.794655 6.6772e+07 0.00335333 1.46637e+07 6.85165e+06 1.47552e+07 148 1.47743e+07 1.25335e+07 0.00281991 1.48258e+07 50.087 0.00450213 0.995787 0 50.1555 GTEX-ZAJG-2626-SM-5S2NU 1 C1 6 pieces, all muscularis, good specimens 6.7 Colon Colon - Sigmoid 0001159 839 524 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99199 319298 0.96427 0.993645 0.783533 22150 1 76 0.00202186 125 0 5.65168e+07 0.0355213 665294 5.68783e+07 3.65762e+06 22170 2.81125e+07 0 0.180737 0.993645 0.778554 5.65168e+07 0.00296394 1.21578e+07 7.64568e+06 1.22801e+07 141 1.22178e+07 8.59679e+06 0.00249212 1.23191e+07 50.2063 0.0116968 0.9953 0 50.2501 GTEX-ZAJG-2726-SM-5S2MU 1 C1 2 pieces, post menopausal involution/atrophy 7.1 Ovary Ovary 0000992 848 516 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992295 293104 0.964665 0.993869 0.73791 21385 1 76 0.00189685 127 0 5.85127e+07 0.0351625 328332 5.88736e+07 4.14856e+06 21410 2.91081e+07 0 0.226756 0.993869 0.733386 5.85127e+07 0.00281378 1.27874e+07 8.50494e+06 1.29107e+07 129 1.28614e+07 1.03108e+07 0.00235459 1.29359e+07 50.1444 0.0055769 0.995444 0 50.2401 GTEX-ZAJG-2826-SM-5HL8D 2 C1 2 pieces, mainly myometrium, focal autolyzed stroma 5.9 Uterus Uterus 0000995 850 514 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.983974 263971 0.97008 0.987776 0.803786 22565 1 76 0.00229087 175 0 7.73053e+07 0.0296846 565675 7.8262e+07 7.50681e+06 22588 3.8376e+07 0 0.166294 0.987776 0.793961 7.73053e+07 0.00340587 1.68264e+07 1.19057e+07 1.69716e+07 190 1.69502e+07 1.33443e+07 0.00284623 1.71447e+07 50.2852 0.00722796 0.991577 0 50.2149 GTEX-ZAJG-2926-SM-5HL8P 1 C1 6 pieces, squamous mucosa is 0.1mm, ~1.5% thickness 6.9 Vagina Vagina 0000996 852 513 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 EXCLUDE 0.990654 198059 0.972535 0.992875 0.769856 21902 1 76 0.00227788 127 0 6.14961e+07 0.0272186 212350 6.19374e+07 5.08188e+06 21916 3.06092e+07 0 0.202678 0.992875 0.764371 6.14961e+07 0.00320952 1.36606e+07 8.67615e+06 1.37344e+07 134 1.37394e+07 1.1129e+07 0.00274266 1.37914e+07 50.0944 0.00342846 0.995097 0 50.1346 GTEX-ZAJG-3026-SM-5HL92 1 C1 4 pieces 7 Brain Brain - Cerebellum 0002037 891 475 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988509 478413 0.935503 0.991045 0.695679 23868 1 76 0.00270796 155 0 7.67999e+07 0.0641468 1.1094e+06 7.74938e+07 6.98302e+06 23895 3.82027e+07 0 0.239824 0.991045 0.689449 7.67999e+07 0.00362709 1.62893e+07 2.15451e+07 1.65161e+07 166 1.65562e+07 9.09897e+06 0.00316635 1.64290e+07 49.8072 0.0143159 0.993581 0 50.3457 GTEX-ZAJG-3126-SM-5HL9J 1 C1 4 pieces 6.3 Brain Brain - Cortex 0001870 893 473 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989282 294215 0.96112 0.99239 0.808092 23473 1 76 0.00282822 161 0 7.23259e+07 0.0386635 4.66518e+06 7.28805e+07 6.83261e+06 23489 3.59652e+07 0 0.153028 0.99239 0.801943 7.23259e+07 0.00390734 1.55837e+07 1.09813e+07 1.59868e+07 195 1.58801e+07 7.6324e+06 0.00336609 1.58831e+07 50.0047 0.0640113 0.995499 0 50.6384 GTEX-ZAJG-3226-SM-5HL9V 2 C1 1 piece, all adenohypphysis 6.9 Pituitary Pituitary 0000007 895 472 BP-45247 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989948 245358 0.96086 0.992483 0.732423 25217 1 76 0.00236987 134 0 7.05365e+07 0.0388827 402277 7.10708e+07 6.48634e+06 25260 3.50891e+07 0 0.228437 0.992483 0.726918 7.05365e+07 0.00328152 1.49309e+07 8.10903e+06 1.50036e+07 145 1.50387e+07 1.15521e+07 0.00282453 1.50613e+07 50.0374 0.00566023 0.995018 0 50.1215 GTEX-ZAK1-0011-R4a-SM-6AJBK C1, A1 7.4 Brain Brain - Amygdala 0001876 631 BP-49920 RNA isolation_PAXgene Tissue miRNA 02/27/2014 LCSET-5450 06/26/2014 TruSeq.v1 RNASEQ 0.991917 501915 0.955524 0.994025 0.828496 23114 1 76 0.00186749 205 0 6.71997e+07 0.0441386 3.87942e+06 6.76036e+07 4.53623e+06 23133 3.34633e+07 0 0.127029 0.994025 0.823545 6.71997e+07 0.00274298 1.45625e+07 2.0398e+07 1.47063e+07 212 1.45799e+07 7.75026e+06 0.0023043 1.48235e+07 50.4142 0.0573849 0.996133 0 50.2457 GTEX-ZAK1-0126-SM-5IJD3 0 C1 6 pieces, squamous epithelium is ~10microns thick, 1-2 % total thickness 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 710 1296 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988682 198526 0.974712 0.99175 0.8169 22907 1 76 0.00232994 184 0 6.88538e+07 0.0249819 265401 6.94266e+07 9.09503e+06 22925 3.42367e+07 0 0.157812 0.99175 0.81016 6.88538e+07 0.00392909 1.48693e+07 8.38182e+06 1.49183e+07 160 1.49569e+07 1.26645e+07 0.00312704 1.503e+07 50.1219 0.00382276 0.994817 0 50.0822 GTEX-ZAK1-0226-SM-5CVMX 0 C1 2 pieces, ~5-10% fibrous tissue/vessels 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 712 1295 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.987539 237849 0.973137 0.99096 0.796484 23784 1 76 0.00484786 162 0 8.27968e+07 0.0265601 751677 8.35521e+07 1.52737e+07 23813 4.11138e+07 0 0.176653 0.99096 0.789284 8.27968e+07 0.00681142 1.82488e+07 1.02524e+07 1.8274e+07 200 1.83154e+07 1.17399e+07 0.00582625 1.84671e+07 50.2063 0.00899651 0.994381 0 50.0344 GTEX-ZAK1-0426-SM-5J1MS 0 C1 2 pieces, generally clean, 0.5mm nubbin fibrous tissue on one, delineated 6.8 Blood Vessel Artery - Tibial 0007610 733 1275 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989081 184065 0.975003 0.990756 0.830253 22419 1 76 0.00390067 174 0 8.59013e+07 0.0246172 313798 8.67027e+07 4.64437e+06 22447 4.27064e+07 0 0.144751 0.990756 0.822578 8.59013e+07 0.00470537 1.84257e+07 6.53145e+06 1.85564e+07 190 1.85364e+07 1.6774e+07 0.00430234 1.85881e+07 50.0697 0.00361924 0.992432 0 50.1767 GTEX-ZAK1-0526-SM-5K7X4 0 C1 2 pieces, ~10% interstitial fat; rep foci delineated 7.3 Muscle Muscle - Skeletal 0011907 735 1275 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4819 03/16/2014 TruSeq.v1 RNASEQ 0.990692 143390 0.983686 0.992961 0.873437 19050 1 76 0.00232159 128 0 6.82288e+07 0.0161083 751810 6.87125e+07 1.17993e+07 19064 3.39812e+07 0 0.110249 0.992961 0.867289 6.82288e+07 0.00348676 1.50378e+07 7.26829e+06 1.50006e+07 160 1.49756e+07 1.37611e+07 0.00290284 1.52046e+07 50.3793 0.0109414 0.99523 0 49.938 GTEX-ZAK1-0626-SM-5HL8E 0 C1 6 pieces; squamous epithelium averages ~50 microns, 1-2% thickness, trace adherent fat, delineated 6.7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 740 1270 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988071 233961 0.973469 0.99193 0.796563 23698 1 76 0.00222535 177 0 7.30012e+07 0.0263152 399113 7.35951e+07 6.69449e+06 23726 3.62788e+07 0 0.176906 0.99193 0.790135 7.30012e+07 0.00341638 1.59444e+07 8.56089e+06 1.61118e+07 174 1.61567e+07 1.21196e+07 0.00281855 1.6164e+07 50.0114 0.00542309 0.995789 0 50.261 GTEX-ZAK1-0726-SM-5HL8Q 1 C1 2 pieces, incidental simple cysts 5.9 Thyroid Thyroid 0002046 782 1228 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989678 270181 0.966241 0.992588 0.736554 23882 1 76 0.00210637 133 0 6.8292e+07 0.0334936 241732 6.8802e+07 6.00882e+06 23914 3.39585e+07 0 0.229687 0.992588 0.731094 6.8292e+07 0.00323186 1.49191e+07 7.5154e+06 1.49846e+07 151 1.50137e+07 1.00255e+07 0.00266746 1.50781e+07 50.107 0.00351344 0.995497 0 50.1096 GTEX-ZAK1-0726-SM-DMRPK 1 C1 2 pieces, incidental simple cysts Thyroid Thyroid 0002046 782 1228 BP-53704 DNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2014 LCSET-10522 02/04/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-ZAK1-0726-SM-DMZ37 1 C1 2 pieces, incidental simple cysts Thyroid Thyroid 0002046 782 1228 BP-53704 DNA Extraction from Paxgene-derived Lysate Plate Based 06/10/2014 LCSET-10532 01/29/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-ZAK1-1126-SM-5PNXU 1 C1 2 pieces, one is ~40% fat, rep foci delineated 7 Heart Heart - Atrial Appendage 0006631 791 1221 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4918 03/29/2014 TruSeq.v1 RNASEQ 0.99293 291247 0.974864 0.993528 0.776741 23978 1 76 0.00301053 271 0 1.24607e+08 0.0248098 1.30284e+06 1.25419e+08 3.62372e+06 24021 6.20732e+07 0 0.198123 0.993528 0.771714 1.24607e+08 0.00336999 2.69677e+07 1.06636e+07 2.69736e+07 319 2.69515e+07 2.29145e+07 0.00319015 2.70639e+07 50.1041 0.010388 0.994127 0 50.0055 GTEX-ZAK1-1226-SM-5Q5AA 1 C1 6 pieces, some with adherent serosa ~0.5mm 6.5 Blood Vessel Artery - Aorta 0001496 792 1221 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-4952 03/29/2014 TruSeq.v1 RNASEQ 0.98971 195626 0.969539 0.991749 0.749313 22120 1 76 0.00208426 124 0 6.29854e+07 0.0300523 93860 6.35094e+07 4.63142e+06 22145 3.12941e+07 0 0.220227 0.991749 0.74313 6.29854e+07 0.00321704 1.35109e+07 4.76172e+06 1.35849e+07 140 1.35687e+07 1.0223e+07 0.00264948 1.36514e+07 50.152 0.00147789 0.993787 0 50.1364 GTEX-ZAK1-1326-SM-EVYAS 1 C1 2 pieces, involuted TDLUs noted, rep ones delineated. Fibrocystic changes 5.5 Breast Breast - Mammary Tissue 0008367 794 1220 BP-45374 RNA Extraction from Paxgene-derived Lysate Plate Based 10/31/2013 LCSET-10521 05/12/2017 TruSeq.v1 RNASEQ 0.990212 330734 0.967211 0.990721 0.723346 25617 1 76 0.00198691 204 0 8.96741e+07 0.0325069 530929 9.0514e+07 3.96346e+06 25672 4.46904e+07 0 0.243865 0.990721 0.716634 8.96741e+07 0.00293937 1.96908e+07 8.54136e+06 1.98473e+07 215 1.97984e+07 1.25498e+07 0.0024629 1.97858e+07 49.9841 0.00586571 0.991231 0 50.198 GTEX-ZAK1-1526-SM-5S2OV 1 C1 6 pieces, squamous mucosa ~ 40-75% thickness 7.1 Esophagus Esophagus - Mucosa 0006920 802 1213 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991505 280185 0.972833 0.993104 0.788198 22058 1 76 0.00193227 123 0 6.02484e+07 0.0269691 805405 6.06667e+07 4.34692e+06 22070 2.99778e+07 0 0.184635 0.993104 0.782763 6.02484e+07 0.00284774 1.33752e+07 7.44726e+06 1.34662e+07 153 1.3408e+07 8.4572e+06 0.00238927 1.35322e+07 50.2306 0.0132759 0.994702 0 50.1694 GTEX-ZAK1-1826-SM-5HL93 1 C1 2 pieces, all muscularis 5.9 Esophagus Esophagus - Gastroesophageal Junction 0004550 806 1211 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990667 202982 0.969572 0.993001 0.772622 22593 1 76 0.00210974 131 0 6.58355e+07 0.030224 851788 6.62995e+07 5.78173e+06 22614 3.27488e+07 0 0.19695 0.993001 0.767214 6.58355e+07 0.00319396 1.42595e+07 6.2138e+06 1.43732e+07 160 1.43276e+07 8.9736e+06 0.00265057 1.44491e+07 50.211 0.0128476 0.995335 0 50.1985 GTEX-ZAK1-2326-SM-5CVMY 2 C1 2 pieces, moderate-marked saponification/autolysis; islets still well visualized; rep ones delineated 6 Pancreas Pancreas 0001150 817 1203 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.982089 236111 0.980333 0.988081 0.824928 19876 1 76 0.00489168 97 0 6.20208e+07 0.019322 284306 6.27689e+07 1.18938e+07 19888 3.06989e+07 0 0.155405 0.988081 0.815095 6.20208e+07 0.00798618 1.42981e+07 2.58575e+07 1.44497e+07 109 1.44806e+07 1.85627e+07 0.00642955 1.46432e+07 50.2791 0.00452941 0.994073 0 50.2637 GTEX-ZAK1-2426-SM-EXOHM 2 C1 6 pieces; squamous mucosa beginning to slough, ~0.1mm thick, 2-3% thickness 5.5 Vagina Vagina 0000996 819 1201 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-10975 05/25/2017 TruSeq.v1 RNASEQ 0.983574 163924 0.968732 0.985086 0.735999 23620 1 76 0.00218498 139 0 6.80078e+07 0.0309615 170123 6.90374e+07 4.15462e+06 23653 3.38326e+07 0 0.232733 0.985086 0.725022 6.80078e+07 0.00323101 1.48629e+07 6.77831e+06 1.49877e+07 148 1.49209e+07 1.07346e+07 0.00270719 1.50297e+07 50.1817 0.00246421 0.986597 0 50.2089 GTEX-ZAK1-2526-SM-5S2N7 1 C1 2 pieces, myometrium, no viable endometrium noted 6.7 Uterus Uterus 0000995 821 1200 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991084 193691 0.962251 0.992393 0.710317 22921 1 76 0.00204658 124 0 6.2487e+07 0.037536 244850 6.2966e+07 4.28692e+06 22950 3.10757e+07 0 0.251934 0.992393 0.704914 6.2487e+07 0.00289822 1.35844e+07 6.99883e+06 1.37503e+07 144 1.3665e+07 8.25561e+06 0.00247184 1.37568e+07 50.1675 0.00388861 0.993703 0 50.3035 GTEX-ZAK1-2926-SM-5HL9S 1 C1 4 pieces, Purkinje cells show minimal ischemic damage 6.1 Brain Brain - Cerebellum 0002037 855 1168 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.989085 450147 0.939557 0.991753 0.718938 23269 1 76 0.00225589 154 0 7.04591e+07 0.0601555 1.07608e+06 7.1045e+07 6.60537e+06 23291 3.50459e+07 0 0.220619 0.991753 0.713009 7.04591e+07 0.00318484 1.50406e+07 2.0375e+07 1.52532e+07 168 1.52652e+07 7.94939e+06 0.00271912 1.51994e+07 49.892 0.0151465 0.994421 0 50.3508 GTEX-ZAK1-3026-SM-5S2MJ 1 C1 4 pieces 7.1 Brain Brain - Cortex 0001870 856 1168 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990275 488252 0.961351 0.993112 0.812274 23745 1 76 0.00173648 201 0 7.48162e+07 0.0382823 2.564e+06 7.53351e+07 5.62798e+06 23763 3.71757e+07 0 0.149076 0.993112 0.806679 7.48162e+07 0.00277727 1.62369e+07 1.65211e+07 1.64424e+07 229 1.63731e+07 8.84052e+06 0.00225539 1.65032e+07 50.1978 0.0340346 0.995949 0 50.3145 GTEX-ZAK1-3126-SM-5S2O8 1 C1 1 piece, ~50% neurohypophysis, delineated; rest adenohypophysis 7.4 Pituitary Pituitary 0000007 857 1167 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992436 482159 0.950887 0.993971 0.714493 23791 1 76 0.00192563 114 0 5.45381e+07 0.0488857 256764 5.48689e+07 3.78899e+06 23822 2.71355e+07 0 0.236393 0.993971 0.710186 5.45381e+07 0.00284646 1.16205e+07 1.14484e+07 1.17506e+07 128 1.17277e+07 7.4989e+06 0.00238534 1.17344e+07 50.0142 0.00467959 0.995506 0 50.2783 GTEX-ZAKK-0001-SM-DK2JI B1 Blood Whole Blood 0013756 -221 BP-35551 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/29/2013 LCSET-10424 01/28/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-ZAKK-0001-SM-DLIO8 B1 Blood Whole Blood 0013756 -221 BP-35551 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/29/2013 LCSET-10442 01/23/2017 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-ZAKK-0326-SM-5EGHA 0 B1 2 pieces. Moderate atrophy with fibrosis and small vessel disease 8 Muscle Muscle - Skeletal 0011907 35 1130 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.986595 174123 0.980143 0.991155 0.863033 20813 1 76 0.00227438 114 0 6.2466e+07 0.0195405 780860 6.30234e+07 9.51936e+06 20823 3.10237e+07 0 0.117109 0.991155 0.8554 6.2466e+07 0.00555403 1.33654e+07 7.06992e+06 1.3424e+07 138 1.34664e+07 1.30709e+07 0.00390666 1.35845e+07 50.2184 0.01239 0.995715 0 50.1094 GTEX-ZAKK-0426-SM-5EGHB 0 B1 2 pieces. Moderate to severe atherosclerosis with up to 90% occlusion. 6.3 Blood Vessel Artery - Tibial 0007610 40 1125 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.984844 156417 0.971735 0.989637 0.81776 22818 1 76 0.00247053 130 0 6.0596e+07 0.0279229 313402 6.12305e+07 9.37981e+06 22833 3.00789e+07 0 0.153975 0.989637 0.809286 6.0596e+07 0.00579035 1.30772e+07 5.85731e+06 1.32209e+07 139 1.32573e+07 1.08091e+07 0.0041224 1.33133e+07 50.1052 0.0051184 0.994431 0 50.2732 GTEX-ZAKK-0526-SM-5EGHC 0 B1 2 pieces. Prominent (diabetic) small artery disease (thickening). Stromal fibrosis. Nerve fibers appear atrophic. 6.6 Nerve Nerve - Tibial 0001323 45 1120 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.980604 235747 0.969488 0.987061 0.803012 24325 1 76 0.00253452 171 0 7.53859e+07 0.0302151 408049 7.63741e+07 1.30593e+07 24353 3.73529e+07 0 0.166476 0.987061 0.792621 7.53859e+07 0.00600638 1.64218e+07 7.99142e+06 1.65868e+07 170 1.67126e+07 1.30275e+07 0.00425909 1.67574e+07 50.0669 0.00534277 0.993517 0 50.25 GTEX-ZC5H-0003-SM-4YUW1 B1 Blood Whole Blood 0013756 206 BP-35633 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZC5H-0003-SM-53UAR B1 Blood Whole Blood 0013756 206 BP-35633 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZC5H-0003-SM-6UH3C B1 Blood Whole Blood 0013756 206 BP-35633 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 01/31/2013 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZC5H-0004-SM-4WAXK B1 9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 206 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.986838 1.23893e+06 0.934258 0.990347 0.818558 19566 1 76 0.00209378 141 0 6.78718e+07 0.0652023 466725 6.85334e+07 6.35579e+06 19578 3.37191e+07 0 0.1157 0.990347 0.810657 6.78718e+07 0.00294235 1.44872e+07 3.72601e+07 1.4723e+07 136 1.48163e+07 1.67082e+07 0.00251656 1.46502e+07 49.7182 0.00681019 0.993857 0 50.4036 GTEX-ZC5H-0005-SM-4WAXM B1 8.8 Blood Whole Blood 0013756 206 BP-35689 RNA isolation_PAXgene Blood RNA (Manual) 02/01/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.95268 1.02219e+06 0.956844 0.955775 0.794258 16167 1 76 0.00226612 87 0 9.15512e+07 0.0409049 241089 9.57874e+07 9.40630e+06 16170 4.542e+07 0 0.162587 0.955775 0.759132 9.15512e+07 0.00338166 2.12736e+07 1.96255e+08 2.1579e+07 132 2.16099e+07 2.65025e+07 0.00282208 2.15682e+07 49.9517 0.00251692 0.958871 0 50.3563 GTEX-ZC5H-0008-SM-4WAX8 B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 212 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.989608 673511 0.964616 0.992895 0.854151 20596 1 76 0.00171334 181 0 8.14201e+07 0.0350816 247542 8.20027e+07 7.55567e+06 20607 4.04887e+07 0 0.110464 0.992895 0.848082 8.14201e+07 0.00274199 1.78575e+07 2.2583e+07 1.80048e+07 178 1.80915e+07 2.05529e+07 0.00222596 1.80396e+07 49.9281 0.0030187 0.996182 0 50.2054 GTEX-ZC5H-0126-SM-4WAYL 0 B1 2 pieces, minimal fibrous tissue 6.1 Adipose Tissue Adipose - Subcutaneous 0002190 208 495 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.986333 638791 0.964144 0.990168 0.799839 22562 1 76 0.00205801 164 0 7.31492e+07 0.0355839 623636 7.38756e+07 6.98452e+06 22582 3.63186e+07 0 0.164305 0.990168 0.791975 7.31492e+07 0.00305123 1.58414e+07 1.63078e+07 1.60337e+07 178 1.60689e+07 1.22326e+07 0.0025527 1.6095e+07 50.0407 0.0084417 0.994002 0 50.3016 GTEX-ZC5H-0226-SM-4WAY9 0 B1 6 pieces, trace fat (~0.5mm) on a few sections. Squamous epithelium is ~50-60 microns thick 6.6 Skin Skin - Sun Exposed (Lower leg) 0004264 212 491 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.990414 332140 0.965712 0.992737 0.792646 22735 1 76 0.00205959 149 0 5.73369e+07 0.034088 381471 5.77564e+07 5.04397e+06 22754 2.85266e+07 0 0.173066 0.992737 0.786889 5.73369e+07 0.00303117 1.24503e+07 8.89537e+06 1.25087e+07 139 1.25192e+07 9.67498e+06 0.00254424 1.25749e+07 50.1111 0.00660483 0.995061 0 50.1171 GTEX-ZC5H-0326-SM-5HL9F 0 B1 2 pieces, <1% interstitial fat; trace adherent fat, delineated 8.2 Muscle Muscle - Skeletal 0011907 213 490 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991501 187024 0.982808 0.993852 0.860372 20160 1 76 0.00179106 163 0 7.41279e+07 0.0169492 1.0551e+06 7.45865e+07 5.88378e+06 20172 3.69103e+07 0 0.122436 0.993852 0.855083 7.41279e+07 0.00260502 1.61925e+07 6.36374e+06 1.62531e+07 192 1.62232e+07 1.51023e+07 0.00219708 1.63806e+07 50.2413 0.014146 0.996204 0 50.0935 GTEX-ZC5H-0426-SM-5HL9R 0 B1 2 pieces, circumferential adherent fibrous tissue ~0.5mm 7.9 Blood Vessel Artery - Tibial 0007610 218 485 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990342 249925 0.973515 0.99301 0.820747 21190 1 76 0.00200541 164 0 7.21841e+07 0.0261373 328694 7.26922e+07 6.9624e+06 21209 3.59035e+07 0 0.152769 0.99301 0.815009 7.21841e+07 0.0029665 1.55081e+07 6.58898e+06 1.5615e+07 167 1.56089e+07 1.40223e+07 0.00248467 1.56939e+07 50.1359 0.00452172 0.995677 0 50.1718 GTEX-ZC5H-0526-SM-5HL9E 0 B1 3 pieces, two with trace adherent fatty nubbins ~0.5-1.0mm, delineated 6.2 Nerve Nerve - Tibial 0001323 217 486 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.986385 295600 0.96845 0.990264 0.747452 24271 1 76 0.00213296 171 0 7.79574e+07 0.0312813 402242 7.87239e+07 7.72937e+06 24305 3.87242e+07 0 0.220999 0.990264 0.740174 7.79574e+07 0.00327459 1.7078e+07 8.93348e+06 1.72911e+07 177 1.73282e+07 1.19356e+07 0.00270154 1.73267e+07 49.9979 0.00510953 0.994142 0 50.3099 GTEX-ZC5H-0626-SM-5LU9K 1 B1 2 pieces, well preserved, minimal inflammation 5.7 Thyroid Thyroid 0002046 236 467 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.989595 257233 0.962437 0.991863 0.696892 23642 1 76 0.00458833 114 0 6.06652e+07 0.0373364 320859 6.11629e+07 5.16033e+06 23672 3.01509e+07 0 0.265545 0.991863 0.691221 6.06652e+07 0.00393686 1.32557e+07 6.0493e+06 1.3293e+07 123 1.33212e+07 8.13253e+06 0.00426334 1.3363e+07 50.0783 0.00524597 0.99413 0 50.0703 GTEX-ZC5H-0826-SM-5N9FH 2 B1 2 pieces, moderately autolyzed, Islets still discernable; rep. ones delineated 5.7 Pancreas Pancreas 0001150 248 455 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4905 03/23/2014 TruSeq.v1 RNASEQ 0.988398 437550 0.964067 0.989874 0.7513 24018 1 76 0.00397999 127 0 8.39561e+07 0.035764 585168 8.48149e+07 4.06368e+06 24052 4.17087e+07 0 0.212767 0.989874 0.743693 8.39561e+07 0.00414528 1.86472e+07 1.65884e+07 1.87247e+07 146 1.8742e+07 1.63563e+07 0.00406251 1.87611e+07 50.0255 0.00689935 0.99135 0 50.1037 GTEX-ZC5H-0926-SM-5CVMZ 2 B1 2 pieces moderate congestion, chronic & focal acute pneumonitis, a few giant cells noted in bronchial lumina, ? aspiration features 7.5 Lung Lung 0008952 254 449 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985111 293394 0.974006 0.98932 0.769931 24331 1 76 0.00506211 136 0 7.42035e+07 0.0255519 457543 7.50046e+07 1.45823e+07 24353 3.6799e+07 0 0.204075 0.98932 0.761708 7.42035e+07 0.00716969 1.6495e+07 1.30243e+07 1.66453e+07 146 1.67369e+07 1.22175e+07 0.00611142 1.67065e+07 49.9545 0.0061002 0.993528 0 50.2267 GTEX-ZC5H-1026-SM-5CVN1 1 B1 6 pieces ~0.5mm adherent serosa 6.9 Blood Vessel Artery - Aorta 0001496 257 446 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984799 277029 0.977499 0.989498 0.836316 21634 1 76 0.00473432 133 0 6.82717e+07 0.0221077 134695 6.89963e+07 1.24831e+07 21646 3.38334e+07 0 0.141183 0.989498 0.827533 6.82717e+07 0.00754522 1.47743e+07 7.32156e+06 1.49151e+07 143 1.49955e+07 1.3464e+07 0.00613309 1.50028e+07 50.0121 0.00195221 0.994198 0 50.2371 GTEX-ZC5H-1326-SM-5HL7E 1 B1 6 pieces, squamous mucosa is 40-60% thickness, ~250 microns 7.7 Esophagus Esophagus - Mucosa 0006920 271 432 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.987943 313992 0.971977 0.99129 0.796935 22319 1 76 0.00216839 167 0 7.82527e+07 0.0277472 535221 7.89402e+07 7.6363e+06 22336 3.89062e+07 0 0.175042 0.99129 0.789994 7.82527e+07 0.00326148 1.74451e+07 1.12551e+07 1.76488e+07 190 1.76973e+07 1.33628e+07 0.00271309 1.76488e+07 49.9314 0.00678008 0.994638 0 50.2902 GTEX-ZC5H-1526-SM-5HL9Y 0 B1 6 pieces; squamous epithelium is 35-45 microns thick. Minimal adherent dermal fat 7.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 281 422 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988991 282417 0.972422 0.991394 0.807237 23471 1 76 0.00211615 192 0 7.70604e+07 0.0273738 720419 7.77293e+07 6.80173e+06 23498 3.83247e+07 0 0.165185 0.991394 0.80029 7.70604e+07 0.00327515 1.67913e+07 8.83244e+06 1.69495e+07 191 1.69083e+07 1.29031e+07 0.00269424 1.70101e+07 50.15 0.00926831 0.993798 0 50.2344 GTEX-ZC5H-1626-SM-5HL7L 1 B1 2 pieces, incidentaly ~3mm lymph node in one section, delineated. ~10% vessel/fibrous interstitial tissue 6.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 282 421 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.990154 244229 0.976285 0.993042 0.775351 23778 1 76 0.00214848 206 0 8.41229e+07 0.0234682 1.08866e+06 8.47124e+07 7.48534e+06 23807 4.18401e+07 0 0.200934 0.993042 0.769956 8.41229e+07 0.00318637 1.86812e+07 1.19341e+07 1.87806e+07 234 1.88295e+07 1.26761e+07 0.00266592 1.88662e+07 50.0487 0.0128513 0.99593 0 50.1328 GTEX-ZC5H-1726-SM-5HL7X 2 B1 6 pieces, glomeruli present in all sections 6.1 Kidney Kidney - Cortex 0001225 288 415 BP-45268 RNA Extraction from Paxgene-derived Lysate Plate Based 10/29/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.988984 235196 0.975136 0.992423 0.813966 22752 1 76 0.00215828 266 0 7.87461e+07 0.0247366 3.05636e+06 7.93473e+07 7.5691e+06 22768 3.91693e+07 0 0.161171 0.992423 0.807798 7.87461e+07 0.00317863 1.74401e+07 2.18476e+07 1.74307e+07 264 1.74669e+07 7.52924e+06 0.00266668 1.76192e+07 50.2171 0.0385188 0.995861 0 49.9866 GTEX-ZC5H-2026-SM-5CVN2 1 B1 2 pieces, late stage resolving hemorrhagic corpus luteum, delineated 6.8 Ovary Ovary 0000992 297 406 BP-45390 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.985867 245682 0.968571 0.989855 0.729812 23331 1 76 0.00492193 131 0 7.02044e+07 0.0311761 162483 7.0924e+07 1.43287e+07 23373 3.48315e+07 0 0.238759 0.989855 0.722408 7.02044e+07 0.00695762 1.53503e+07 9.45671e+06 1.54833e+07 130 1.55679e+07 1.21064e+07 0.00593567 1.55361e+07 49.9488 0.00229095 0.993842 0 50.2157 GTEX-ZC5H-2226-SM-4WAWS 1 B1 6 pieces, squamous mucosa is ~100-150microns thick 8.1 Vagina Vagina 0000996 309 394 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.98878 546517 0.967246 0.991611 0.716202 24271 1 76 0.00218365 176 0 9.04135e+07 0.0325451 312018 9.11784e+07 8.05072e+06 24314 4.49257e+07 0 0.251045 0.991611 0.710193 9.04135e+07 0.00318431 2.01036e+07 1.44211e+07 2.01495e+07 196 2.02148e+07 1.39947e+07 0.00268255 2.0296e+07 50.1002 0.00342206 0.994442 0 50.057 GTEX-ZC5H-2326-SM-4WAYT 2 B1 6 pieces, diffuse confluent lymphoid aggregates in all sections ~0.5mm thick, ~25% total volume, rep. areas delineated. Surface mucosa nearl - total autolysis 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 323 380 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.988027 682984 0.945015 0.990569 0.68411 25101 1 76 0.00235716 144 0 7.62569e+07 0.0546839 416907 7.69829e+07 7.11102e+06 25142 3.7888e+07 0 0.260905 0.990569 0.677658 7.62569e+07 0.00322298 1.63091e+07 1.84324e+07 1.64005e+07 156 1.64369e+07 1.0442e+07 0.00278896 1.64777e+07 50.0621 0.00541558 0.993112 0 50.1396 GTEX-ZC5H-2426-SM-4WAZ6 2 B1 6 pieces, all muscularis except focal mucosal diverticulum, ensquared; unusually poorly preserved, focal areas advance autolysis, delineated. 6.9 Colon Colon - Sigmoid 0001159 327 376 BP-42024 RNA isolation_PAXgene Tissue miRNA 08/07/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.989129 826191 0.952031 0.991164 0.757951 23683 1 76 0.00216703 158 0 7.87457e+07 0.0477549 555314 7.94477e+07 6.93974e+06 23710 3.91472e+07 0 0.19408 0.991164 0.751254 7.87457e+07 0.00306274 1.66695e+07 2.17859e+07 1.68592e+07 180 1.68271e+07 1.18694e+07 0.00261397 1.68784e+07 50.0762 0.00698968 0.993199 0 50.283 GTEX-ZC5H-2626-SM-5J2MG 1 B1 2 pieces, TDLUs well seen, ~10-15% of sections, rest fibro-fatty tissue 7.7 Breast Breast - Mammary Tissue 0008367 334 369 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.981133 288112 0.97032 0.985588 0.765489 27003 1 76 0.00460006 284 0 1.16519e+08 0.0288616 423984 1.18222e+08 6.80601e+06 27058 5.77525e+07 0 0.204831 0.985588 0.754456 1.16519e+08 0.00634424 2.56473e+07 1.17291e+07 2.57942e+07 260 2.59544e+07 2.09264e+07 0.00546821 2.59813e+07 50.0259 0.00358632 0.990043 0 50.1428 GTEX-ZC5H-2726-SM-5KLZW 1 B1 2 pieces glandular tissue is ~10-15% of both sections (delineated), rest is squamous mucosa and fibromuscular and adipose tissue 7.3 Salivary Gland Minor Salivary Gland 0006330 341 362 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986111 155070 0.97205 0.988788 0.777895 25253 1 76 0.00411469 175 0 8.58618e+07 0.0267933 451714 8.68355e+07 4.16458e+06 25286 4.26487e+07 0 0.194155 0.988788 0.769173 8.58618e+07 0.00512784 1.89411e+07 9.40872e+06 1.9152e+07 190 1.91901e+07 1.44477e+07 0.00461989 1.91176e+07 49.9053 0.00520195 0.991465 0 50.2769 GTEX-ZDTS-0001-SM-4WAXW C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 505 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.989739 917969 0.943687 0.991792 0.796278 20174 1 76 0.00224317 134 0 6.36317e+07 0.0554401 388517 6.41584e+07 5.37684e+06 20192 3.16339e+07 0 0.147409 0.991792 0.789742 6.36317e+07 0.00301046 1.37858e+07 2.52602e+07 1.38998e+07 131 1.3955e+07 1.39692e+07 0.00262602 1.38674e+07 49.8426 0.00605559 0.993845 0 50.2058 GTEX-ZDTS-0002-SM-4YUVC C1 Blood Whole Blood 0013756 505 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZDTS-0002-SM-53UAQ C1 Blood Whole Blood 0013756 505 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZDTS-0002-SM-6UH3E C1 Blood Whole Blood 0013756 505 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZDTS-0006-SM-4WAYZ C1 9.5 Blood Whole Blood 0013756 505 BP-35729 RNA isolation_PAXgene Blood RNA (Manual) 02/04/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.985239 1.84586e+06 0.902773 0.988036 0.662508 19856 1 76 0.00266548 114 0 6.70667e+07 0.0961918 272885 6.78788e+07 6.13633e+06 19870 3.32958e+07 0 0.240265 0.988036 0.654581 6.70667e+07 0.00376372 1.38845e+07 7.79037e+07 1.41068e+07 123 1.41655e+07 1.04398e+07 0.00321304 1.40709e+07 49.8326 0.00402018 0.990833 0 50.3972 GTEX-ZDTS-0008-SM-4E3I8 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 630 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989663 942564 0.969026 0.992918 0.866491 21176 1 76 0.00229051 285 0 1.13455e+08 0.0306467 636351 1.14264e+08 1.26541e+07 21194 5.64245e+07 0 0.102536 0.992918 0.860354 1.13455e+08 0.0034157 2.5132e+07 2.99954e+07 2.53116e+07 295 2.5447e+07 2.95115e+07 0.00285126 2.53659e+07 49.9201 0.00556912 0.996173 0 50.1779 GTEX-ZDTS-0126-SM-4WAY5 0 C1 6 pieces; well trimmed of subcutaneous fat 7.5 Skin Skin - Sun Exposed (Lower leg) 0004264 628 563 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.986621 531367 0.969405 0.990286 0.818341 22756 1 76 0.00231343 164 0 6.68419e+07 0.0303791 407018 6.74976e+07 6.12135e+06 22769 3.31834e+07 0 0.151064 0.990286 0.810392 6.68419e+07 0.00359172 1.45165e+07 1.11218e+07 1.46343e+07 161 1.46821e+07 1.14847e+07 0.00295021 1.47079e+07 50.0439 0.00603011 0.993951 0 50.202 GTEX-ZDTS-0226-SM-5HL7Q 1 C1 2 pieces; large vein =10% of 1 piece 6.8 Adipose Tissue Adipose - Subcutaneous 0002190 631 561 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.991702 169297 0.976721 0.993922 0.81345 22704 1 76 0.0020736 173 0 7.37601e+07 0.0229432 243999 7.42111e+07 6.37501e+06 22731 3.67161e+07 0 0.163271 0.993922 0.808506 7.37601e+07 0.00297789 1.62356e+07 7.1047e+06 1.63513e+07 178 1.63478e+07 1.34998e+07 0.00252473 1.63917e+07 50.0671 0.0032879 0.996143 0 50.1775 GTEX-ZDTS-0326-SM-5HL83 1 C1 2 pieces 6.2 Nerve Nerve - Tibial 0001323 633 559 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4807 02/28/2014 TruSeq.v1 RNASEQ 0.986892 263437 0.967985 0.989807 0.74026 23709 1 76 0.00223117 141 0 6.74616e+07 0.0317643 282464 6.81563e+07 6.36166e+06 23748 3.35217e+07 0 0.227724 0.989807 0.732715 6.74616e+07 0.00339685 1.47964e+07 6.9232e+06 1.49088e+07 152 1.49049e+07 9.68782e+06 0.00281229 1.49883e+07 50.1395 0.00414435 0.992722 0 50.1891 GTEX-ZDTS-0426-SM-4WAYH 1 C1 2 pieces 7.6 Blood Vessel Artery - Tibial 0007610 635 558 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4162 10/14/2013 TruSeq.v1 RNASEQ 0.989541 247190 0.976763 0.992503 0.810536 20417 1 76 0.00207868 122 0 5.28943e+07 0.0228575 258381 5.32939e+07 4.72109e+06 20430 2.6289e+07 0 0.166228 0.992503 0.804459 5.28943e+07 0.00302469 1.14197e+07 5.11241e+06 1.14684e+07 126 1.14992e+07 9.5911e+06 0.00255027 1.15373e+07 50.0827 0.00484823 0.995466 0 50.1066 GTEX-ZDTS-0526-SM-4WKH9 0 C1 2 pieces 8 Muscle Muscle - Skeletal 0011907 638 555 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.992267 321933 0.98586 0.994411 0.882409 19923 1 76 0.00191137 267 0 9.72453e+07 0.0139147 1.08079e+06 9.77919e+07 7.74105e+06 19933 4.84211e+07 0 0.10345 0.994411 0.877478 9.72453e+07 0.00267638 2.10431e+07 1.08869e+07 2.11862e+07 268 2.11575e+07 2.10667e+07 0.00229305 2.12615e+07 50.1226 0.011052 0.996555 0 50.1695 GTEX-ZDTS-0526-SM-62LFA 0 C1 2 pieces 8 Muscle Muscle - Skeletal 0011907 638 555 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-5306 06/01/2014 TruSeq.v1 EXCLUDE 0.987955 227282 0.984649 0.991534 0.882063 19432 1 76 0.00261014 267 0 9.6954e+07 0.0150604 1.12671e+06 9.77818e+07 7.1778e+06 19440 4.82248e+07 0 0.102586 0.991534 0.874595 9.6954e+07 0.0030718 2.09731e+07 1.17372e+07 2.09927e+07 257 2.10639e+07 2.12376e+07 0.00284014 2.1207e+07 50.1692 0.0115227 0.995112 0 50.0234 GTEX-ZDTS-0526-SM-6AJB8 0 C1 2 pieces 8 Muscle Muscle - Skeletal 0011907 638 555 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-5450 06/26/2014 TruSeq.v1 EXCLUDE 0.993353 130849 0.985573 0.995274 0.877707 18785 1 76 0.00185331 149 0 7.43933e+07 0.0141892 816125 7.47466e+07 5.18989e+06 18791 3.70744e+07 0 0.107865 0.995274 0.873559 7.43933e+07 0.00257049 1.60019e+07 9.08366e+06 1.61023e+07 167 1.60989e+07 1.65901e+07 0.00221121 1.61354e+07 50.0566 0.0109186 0.997194 0 50.1565 GTEX-ZDTS-0526-SM-6EU38 0 C1 2 pieces 8 Muscle Muscle - Skeletal 0011907 638 555 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-5452 07/22/2014 TruSeq.v1 EXCLUDE 0.989812 79723 0.982323 0.991083 0.862428 19508 1 76 0.00387349 120 0 7.43334e+07 0.0173659 610678 7.50023e+07 7.06822e+06 19518 3.69923e+07 0 0.119895 0.991083 0.854737 7.43334e+07 0.00396694 1.58233e+07 5.89905e+06 1.58467e+07 147 1.5782e+07 1.59805e+07 0.00392016 1.59763e+07 50.3059 0.00814213 0.992353 0 50.0369 GTEX-ZDTS-0826-SM-4WKHL 0 C1 6 pieces; many hair follicles;(avoid pubic hair); well trimmed of subcutaneous fat 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 645 550 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989887 267043 0.974041 0.991906 0.775765 22965 1 76 0.00224338 139 0 6.04597e+07 0.0257628 533516 6.0953e+07 4.8076e+06 22985 3.00766e+07 0 0.198276 0.991906 0.769486 6.04597e+07 0.00313605 1.34062e+07 7.20746e+06 1.34534e+07 143 1.34463e+07 9.50041e+06 0.00268881 1.35357e+07 50.1657 0.00875291 0.993926 0 50.0877 GTEX-ZDTS-0926-SM-4WAXG 1 C1 2 pieces; 25% of 1 piece is fibroadipose and vascular tissue at one side (marked) 7.2 Thyroid Thyroid 0002046 658 537 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4162 10/14/2013 TruSeq.v1 EXCLUDE 0.987659 602471 0.969686 0.990601 0.763542 24522 1 76 0.0021952 157 0 7.78043e+07 0.0300233 190678 7.85425e+07 7.28496e+06 24558 3.86466e+07 0 0.206144 0.990601 0.756365 7.78043e+07 0.00301147 1.70748e+07 8.61143e+06 1.71514e+07 172 1.72172e+07 1.29686e+07 0.00260213 1.72352e+07 50.026 0.0024277 0.993543 0 50.1119 GTEX-ZDTS-0926-SM-5YY9D 1 C1 2 pieces; 25% of 1 piece is fibroadipose and vascular tissue at one side (marked) 7.2 Thyroid Thyroid 0002046 658 537 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-5304 05/19/2014 TruSeq.v1 RNASEQ 0.990293 193478 0.971081 0.99123 0.766352 25358 1 76 0.00270757 213 0 1.01952e+08 0.0286126 295256 1.02854e+08 4.52799e+06 25407 5.07322e+07 0 0.204728 0.99123 0.759632 1.01952e+08 0.00334085 2.24575e+07 9.17724e+06 2.25453e+07 253 2.25154e+07 1.70365e+07 0.00302391 2.25843e+07 50.0765 0.00287063 0.992168 0 50.0975 GTEX-ZDTS-1026-SM-4WAXS 2 C1 2 pieces; debris in bronchi, congestion, patchy emphysema and focal alveolar hemorrhage 5.8 Lung Lung 0008952 659 537 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4162,LCSET-4325 11/02/2013 TruSeq.v1 RNASEQ 0.982095 762185 0.960181 0.984602 0.702833 23643 1 76 0.00253912 147 0 7.71306e+07 0.0393306 716236 7.83368e+07 7.29765e+06 23678 3.82816e+07 0 0.257348 0.984602 0.692011 7.71306e+07 0.00350496 1.68793e+07 2.00758e+07 1.70087e+07 171 1.70291e+07 9.79928e+06 0.00302081 1.70635e+07 50.0505 0.00914303 0.987109 0 50.1909 GTEX-ZDTS-1226-SM-4WKGL 1 C1 2 pieces; 1 has large central fibroadipose collection (marked), 50% of piece; 6.7 Heart Heart - Atrial Appendage 0006631 664 533 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.98899 348663 0.973961 0.991744 0.817156 21398 1 76 0.00205222 129 0 6.59947e+07 0.025715 1.05078e+06 6.65441e+07 5.46064e+06 21412 3.28007e+07 0 0.156805 0.991744 0.810409 6.59947e+07 0.00301562 1.40954e+07 7.20514e+06 1.4185e+07 152 1.41958e+07 1.18885e+07 0.00253258 1.42524e+07 50.0994 0.0157907 0.994497 0 50.1585 GTEX-ZDTS-1326-SM-4WKGX 1 C1 2 pieces 6.8 Heart Heart - Left Ventricle 0006566 667 531 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 EXCLUDE 0.990519 240580 0.980909 0.993401 0.853814 20767 1 76 0.00234954 265 0 7.8462e+07 0.0189514 4.34478e+06 7.89832e+07 6.11328e+06 20781 3.903e+07 0 0.127094 0.993401 0.84818 7.8462e+07 0.00328738 1.74085e+07 1.29846e+07 1.76331e+07 258 1.76829e+07 9.80070e+06 0.0028171 1.75728e+07 49.8438 0.055009 0.996283 0 50.3205 GTEX-ZDTS-1326-SM-6LLHE 1 C1 2 pieces 6.8 Heart Heart - Left Ventricle 0006566 667 531 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-5859 08/02/2014 TruSeq.v1 RNASEQ 0.980457 198186 0.980016 0.988313 0.842888 21532 1 76 0.00270666 267 0 9.41181e+07 0.0198396 5.62016e+06 9.52311e+07 7.78013e+06 21547 4.65969e+07 0 0.137128 0.988313 0.833037 9.41181e+07 0.00402115 2.08013e+07 1.86137e+07 2.07456e+07 305 2.11078e+07 1.22204e+07 0.00335868 2.11173e+07 50.0113 0.059016 0.99617 0 49.933 GTEX-ZDTS-1326-SM-6M462 1 C1 2 pieces 6.8 Heart Heart - Left Ventricle 0006566 667 531 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-5861 08/08/2014 TruSeq.v1 EXCLUDE 0.994815 128397 0.98013 0.996184 0.848073 20411 1 76 0.00272613 194 0 7.36529e+07 0.0197315 4.36999e+06 7.39351e+07 1.03398e+07 20424 3.67329e+07 0 0.132057 0.996184 0.844836 7.36529e+07 0.00369163 1.64266e+07 1.32373e+07 1.64217e+07 223 1.64377e+07 9.14407e+06 0.00320822 1.65023e+07 50.098 0.0591058 0.997553 0 49.9927 GTEX-ZDTS-1426-SM-5K7WC 1 C1 6 pieces; well trimmed 6.7 Blood Vessel Artery - Aorta 0001496 670 528 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.980792 373302 0.978053 0.982421 0.812961 23138 1 76 0.00445033 211 0 1.0405e+08 0.0215134 297061 1.05911e+08 8.38133e+06 23162 5.15484e+07 0 0.165092 0.982421 0.79867 1.0405e+08 0.0052794 2.26536e+07 9.78308e+06 2.26324e+07 227 2.2781e+07 1.95032e+07 0.00486417 2.26856e+07 49.8951 0.00280481 0.984051 0 49.9766 GTEX-ZDTS-1826-SM-5S2N6 0 C1 2 pieces 6.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 679 522 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990529 232018 0.972154 0.99272 0.775757 23413 1 76 0.00197707 162 0 7.36107e+07 0.0275739 433833 7.41505e+07 5.49734e+06 23443 3.65952e+07 0 0.196398 0.99272 0.77011 7.36107e+07 0.00303297 1.61251e+07 8.43605e+06 1.63481e+07 179 1.62973e+07 1.10647e+07 0.00250386 1.63348e+07 50.0575 0.00585071 0.994912 0 50.3435 GTEX-ZDTS-2726-SM-5L3E2 1 C1 6 pieces; well trimmed muscularis; small focus of mucosa (marked) 6.5 Colon Colon - Sigmoid 0001159 699 507 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.988012 199388 0.975136 0.992159 0.859562 20517 1 76 0.00307212 140 0 7.01389e+07 0.0246407 459170 7.06932e+07 7.07285e+06 20524 3.48513e+07 0 0.115574 0.992159 0.852823 7.01389e+07 0.00421755 1.4929e+07 7.18007e+06 1.5081e+07 160 1.50951e+07 1.33801e+07 0.00364244 1.51748e+07 50.1316 0.00649525 0.996307 0 50.2532 GTEX-ZDTT-0002-SM-4YUVO B1 Blood Whole Blood 0013756 -108 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZDTT-0002-SM-53UAP B1 Blood Whole Blood 0013756 -108 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZDTT-0002-SM-6UH3D B1 Blood Whole Blood 0013756 -108 BP-35714 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/04/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZDTT-0004-SM-4WKG3 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -108 BP-38039 RNA isolation_Trizol Manual (Cell Pellet) 04/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991208 1.07146e+06 0.964876 0.993028 0.794207 22584 1 76 0.00221075 286 0 1.10538e+08 0.0346482 825769 1.11314e+08 8.58932e+06 22615 5.50131e+07 0 0.170669 0.993028 0.78867 1.10538e+08 0.00283643 2.45049e+07 1.93718e+07 2.45736e+07 280 2.46347e+07 2.45182e+07 0.00252301 2.46457e+07 50.0112 0.00741834 0.994848 0 50.07 GTEX-ZDTT-0006-SM-4WKFP B1 9.3 Blood Whole Blood 0013756 -108 BP-35729 RNA isolation_PAXgene Blood RNA (Manual) 02/04/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990195 1.22886e+06 0.951423 0.992262 0.791716 20586 1 76 0.00236194 276 0 1.17514e+08 0.0479309 361785 1.18431e+08 9.2041e+06 20602 5.84518e+07 0 0.159707 0.992262 0.78559 1.17514e+08 0.00326935 2.54463e+07 6.86016e+07 2.57456e+07 301 2.58256e+07 2.40624e+07 0.0028147 2.56294e+07 49.8094 0.00305482 0.994329 0 50.2923 GTEX-ZDTT-0008-SM-4E3K5 B1 9.8 Skin Cells - Cultured fibroblasts EFO_0002009 183 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.98903 793431 0.968058 0.992508 0.848925 21561 1 76 0.00232381 221 0 9.44275e+07 0.0316095 367676 9.51403e+07 1.08057e+07 21582 4.69398e+07 0 0.119132 0.992508 0.842565 9.44275e+07 0.00330567 2.08596e+07 2.16298e+07 2.10045e+07 224 2.11531e+07 2.34654e+07 0.00281302 2.10351e+07 49.8601 0.00386457 0.995986 0 50.173 GTEX-ZDTT-0126-SM-4WKHA 0 B1 2 pieces, one ~50% attached adipose tissue 9.4 Adrenal Gland Adrenal Gland 0002369 91 452 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991607 351374 0.979677 0.99386 0.848155 22048 1 76 0.00196374 270 0 8.89711e+07 0.0199635 1.67239e+06 8.95207e+07 7.13912e+06 22072 4.42741e+07 0 0.131521 0.99386 0.842948 8.89711e+07 0.00264677 1.95013e+07 1.12293e+07 1.98475e+07 272 1.98116e+07 1.53566e+07 0.00230448 1.97175e+07 49.881 0.0186816 0.996113 0 50.4398 GTEX-ZDTT-0226-SM-4WKHM 0 B1 6 pieces; intimal thickening 6.6 Blood Vessel Artery - Aorta 0001496 93 450 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.99082 269120 0.97337 0.993069 0.827597 21175 1 76 0.00194954 131 0 5.74946e+07 0.0263138 326350 5.78959e+07 4.54926e+06 21188 2.85933e+07 0 0.145773 0.993069 0.821861 5.74946e+07 0.00296037 1.24985e+07 5.0812e+06 1.25793e+07 145 1.25252e+07 9.87226e+06 0.00245381 1.26816e+07 50.3103 0.00563684 0.995318 0 50.1611 GTEX-ZDTT-0326-SM-4WKF9 0 B1 2 pieces, one ~30% adipose tissue; contraction bands and hemorrhage, polys and early coagulation necrosis suggestive of acute infarction 8.3 Heart Heart - Atrial Appendage 0006631 96 447 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.992027 405528 0.981566 0.99416 0.864795 21339 1 76 0.00190173 188 0 7.53989e+07 0.0181724 1.73239e+06 7.58418e+07 5.4961e+06 21351 3.74964e+07 0 0.116771 0.99416 0.859744 7.53989e+07 0.0028373 1.63897e+07 1.01317e+07 1.6534e+07 208 1.63777e+07 1.2646e+07 0.00236851 1.66936e+07 50.4776 0.0228421 0.996292 0 50.2193 GTEX-ZDTT-0426-SM-4WKFL 0 B1 6 pieces; relatively well-trimmed, 3 with adipose tissue (internal and attached) of 5-10% 6.8 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 97 446 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990732 374729 0.971507 0.992372 0.812439 23986 1 76 0.0020507 387 0 9.74107e+07 0.0283086 1.47351e+06 9.81594e+07 6.96245e+06 24016 4.84934e+07 0 0.159068 0.992372 0.806242 9.74107e+07 0.00284175 2.12909e+07 1.20495e+07 2.15807e+07 337 2.14436e+07 1.4395e+07 0.00244557 2.15873e+07 50.1669 0.0150114 0.994013 0 50.338 GTEX-ZDTT-0526-SM-5HL4M 0 B1 2 pieces, small central cavity in smaller piece, good specimens with only scant fibrous tissue and rare larger vessels 7.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 99 444 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.99032 200193 0.978552 0.992188 0.849391 22074 1 76 0.00192609 207 0 7.87e+07 0.0211364 668748 7.93196e+07 8.34842e+06 22090 3.91951e+07 0 0.129161 0.992188 0.842755 7.87e+07 0.00276326 1.73418e+07 7.8006e+06 1.7451e+07 232 1.7405e+07 1.47291e+07 0.00234388 1.75268e+07 50.1742 0.00843105 0.994056 0 50.1569 GTEX-ZDTT-0726-SM-4WKFK 0 B1 2 pieces, contraction bands noted. 8.6 Heart Heart - Left Ventricle 0006566 103 440 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.9915 428816 0.985358 0.993797 0.875885 21013 1 76 0.00188696 371 0 1.16057e+08 0.0143756 2.53118e+06 1.16781e+08 8.6698e+06 21026 5.7761e+07 0 0.109473 0.993797 0.870452 1.16057e+08 0.00257112 2.53515e+07 2.32906e+07 2.56516e+07 344 2.55615e+07 2.00824e+07 0.00222825 2.56718e+07 50.1076 0.0216746 0.996094 0 50.2942 GTEX-ZDTT-0926-SM-5J2MS 0 B1 2 pieces, numerous hemosiderin-laden macrophages, some emphysematous change 8.4 Lung Lung 0008952 106 437 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.983692 199904 0.974666 0.987771 0.818381 24325 1 76 0.00445534 170 0 8.86116e+07 0.0249348 421703 8.97087e+07 4.99829e+06 24358 4.39874e+07 0 0.156285 0.987771 0.808373 8.86116e+07 0.00612856 1.96015e+07 7.44363e+06 1.97605e+07 193 1.98696e+07 1.64231e+07 0.0052885 1.98327e+07 49.9536 0.00470081 0.991849 0 50.2021 GTEX-ZDTT-1026-SM-5KM19 0 B1 2 pieces, one includes capsule (should be 5mm below capsule), influx of granulocytes within red pulp 5.9 Spleen Spleen 0002106 108 435 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4820 03/21/2014 TruSeq.v1 RNASEQ 0.986312 188339 0.964552 0.988745 0.80634 23644 1 76 0.00419783 162 0 7.70955e+07 0.0348095 524047 7.79731e+07 3.76452e+06 23674 3.83036e+07 0 0.158212 0.988745 0.797265 7.70955e+07 0.00532721 1.68452e+07 8.83372e+06 1.70605e+07 186 1.70592e+07 1.1127e+07 0.00476113 1.70252e+07 49.9502 0.00672087 0.991177 0 50.3175 GTEX-ZDTT-1126-SM-4WKFW 1 B1 2 pieces and small fragment, larger pieces are ~40--60% adipose tissue. 7.1 Pancreas Pancreas 0001150 111 432 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989809 402050 0.977808 0.992833 0.852308 21112 1 76 0.00226758 105 0 7.07612e+07 0.0218695 267900 7.1272e+07 5.75465e+06 21126 3.51606e+07 0 0.125501 0.992833 0.846199 7.07612e+07 0.00347057 1.618e+07 1.91083e+07 1.63871e+07 113 1.63819e+07 2.04893e+07 0.00286724 1.63995e+07 50.0269 0.00375884 0.995858 0 50.318 GTEX-ZDTT-1226-SM-4WKG9 0 B1 6 pieces, good specimens, no mucosa seen 7.9 Esophagus Esophagus - Muscularis 0004648 116 427 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991461 282952 0.979654 0.993515 0.877019 21311 1 76 0.00185605 170 0 7.54887e+07 0.0199875 599683 7.59814e+07 6.01746e+06 21319 3.75757e+07 0 0.102635 0.993515 0.871332 7.54887e+07 0.00259236 1.63762e+07 6.39986e+06 1.65201e+07 202 1.64843e+07 1.48386e+07 0.00222345 1.6562e+07 50.1175 0.0078925 0.995569 0 50.2188 GTEX-ZDTT-1326-SM-4WKFH 0 B1 6 pieces 9.4 Esophagus Esophagus - Mucosa 0006920 117 426 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990658 394746 0.978352 0.99228 0.848087 22149 1 76 0.00214597 282 0 9.74409e+07 0.02098 617546 9.8199e+07 7.42837e+06 22165 4.85094e+07 0 0.130265 0.99228 0.84154 9.74409e+07 0.00285698 2.19396e+07 1.43038e+07 2.19948e+07 279 2.19919e+07 2.02552e+07 0.0025009 2.21e+07 50.1225 0.00628872 0.993902 0 50.0628 GTEX-ZDTT-1726-SM-5HL69 2 B1 6 pieces, predominantly good specimens with good representation of lymphoid tissue. Small amount of muscularis included in 2. 8.2 Small Intestine Small Intestine - Terminal Ileum 0001211 136 407 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806,LCSET-5073 03/04/2014 TruSeq.v1 RNASEQ 0.984297 306161 0.974866 0.98909 0.801485 25518 1 76 0.00257061 310 0 1.39476e+08 0.0246717 1.72172e+06 1.41014e+08 2.4919e+07 25565 6.93246e+07 0 0.173381 0.98909 0.792741 1.39476e+08 0.00312056 3.1014e+07 3.00943e+07 3.09978e+07 315 3.10189e+07 1.98645e+07 0.00284425 3.15357e+07 50.4131 0.0122096 0.993882 0 49.9869 GTEX-ZDTT-1926-SM-5HL5W 1 B1 6 pieces, several with attached adipose tissue from 5-50%. 8.1 Colon Colon - Transverse 0001157 140 403 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806,LCSET-5073 03/04/2014 TruSeq.v1 RNASEQ 0.987315 334783 0.973924 0.99125 0.804709 24947 1 76 0.00254533 309 0 1.30446e+08 0.0250264 2.22359e+06 1.31598e+08 1.78184e+07 24992 6.48522e+07 0 0.169215 0.99125 0.797668 1.30446e+08 0.00307 2.88419e+07 2.80253e+07 2.88984e+07 287 2.88751e+07 1.78049e+07 0.00280662 2.92352e+07 50.3099 0.0168969 0.995186 0 50.0489 GTEX-ZDTT-2026-SM-5K7TY 1 B1 2 pieces, spermatogenesis. 6.7 Testis Testis 0000473 145 398 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.986043 217701 0.945902 0.988383 0.759702 31922 1 76 0.0045121 165 0 8.50224e+07 0.0538427 1.48672e+06 8.60218e+07 5.82475e+06 31973 4.22723e+07 0 0.1862 0.988383 0.750877 8.50224e+07 0.00492416 1.829e+07 1.05138e+07 1.83856e+07 181 1.8437e+07 1.28367e+07 0.00471764 1.84212e+07 49.9786 0.0172831 0.990723 0 50.1304 GTEX-ZDTT-2126-SM-5S2O7 0 B1 2 pieces; fibrofatty tissue, no ductal elements noted. 7.3 Breast Breast - Mammary Tissue 0008367 152 391 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.991964 190444 0.975006 0.994103 0.819583 21576 1 76 0.00174491 131 0 5.75715e+07 0.0247022 338572 5.7913e+07 3.88509e+06 21592 2.86416e+07 0 0.155423 0.994103 0.81475 5.75715e+07 0.00270519 1.26008e+07 5.19991e+06 1.27596e+07 146 1.27202e+07 9.8769e+06 0.00222402 1.27612e+07 50.0805 0.00584622 0.996241 0 50.3132 GTEX-ZDTT-2126-SM-5S2OJ 0 B1 2 pieces; fibrofatty tissue, no ductal elements noted. 7.2 Breast Breast - Mammary Tissue 0008367 152 391 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.991033 257043 0.974321 0.993389 0.8109 22100 1 76 0.0017858 143 0 6.48433e+07 0.0254108 408897 6.52748e+07 5.03895e+06 22123 3.22569e+07 0 0.163421 0.993389 0.805539 6.48433e+07 0.00270321 1.41456e+07 6.52577e+06 1.43888e+07 163 1.4343e+07 1.0598e+07 0.00224342 1.43346e+07 49.9855 0.00626424 0.995746 0 50.4261 GTEX-ZDTT-2126-SM-DKPOM 0 B1 2 pieces; fibrofatty tissue, no ductal elements noted. 7.3 Breast Breast - Mammary Tissue 0008367 152 391 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-10313 01/17/2017 TruSeq.v1 RNASEQ 0.992215 362077 0.975999 0.994287 0.828339 23556 1 76 0.00278931 280 0 9.93981e+07 0.0236897 563612 9.99693e+07 1.06657e+07 23580 4.95e+07 0 0.147661 0.994287 0.823606 9.93981e+07 0.00301754 2.17695e+07 9.4893e+06 2.21288e+07 290 2.21693e+07 1.81963e+07 0.00290319 2.19227e+07 49.7204 0.00563785 0.996358 0 50.4092 GTEX-ZDTT-2226-SM-4WKFT 0 B1 2 pieces, one predominantly chronically inflamed mucosa, skeletal muscle and nerve tissue with ~10% salivary gland, second is ~40% salivary gland with muscle and fat. 7.7 Salivary Gland Minor Salivary Gland 0006330 157 386 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 EXCLUDE 0.992328 329512 0.977666 0.994252 0.851651 22570 1 76 0.00193115 273 0 1.00919e+08 0.02213 1.31063e+06 1.01502e+08 8.09793e+06 22587 5.02538e+07 0 0.126015 0.994252 0.846756 1.00919e+08 0.00265717 2.19469e+07 1.26502e+07 2.23867e+07 324 2.22429e+07 1.71916e+07 0.00229346 2.2264e+07 50.0236 0.0129124 0.996177 0 50.496 GTEX-ZDTT-2426-SM-4WKFX 1 B1 4 pieces, well-trimmed. Some intimal thickening. 7.6 Blood Vessel Artery - Tibial 0007610 178 365 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991783 359879 0.973476 0.993566 0.838115 21670 1 76 0.00195881 169 0 7.67178e+07 0.0261267 279902 7.72146e+07 5.82761e+06 21691 3.81852e+07 0 0.135361 0.993566 0.832722 7.67178e+07 0.00275881 1.65702e+07 7.48052e+06 1.66732e+07 183 1.66459e+07 1.49225e+07 0.00235809 1.67365e+07 50.1356 0.00362499 0.995349 0 50.1548 GTEX-ZDTT-2626-SM-5S2OP 1 B1 2 pieces, both disrupted centrally 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 181 362 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993763 205901 0.980669 0.995318 0.872354 20042 1 76 0.00164657 143 0 5.91834e+07 0.0189914 282521 5.94618e+07 4.27818e+06 20048 2.94625e+07 0 0.108315 0.995318 0.86827 5.91834e+07 0.00245073 1.31104e+07 4.80745e+06 1.31561e+07 153 1.31112e+07 1.18641e+07 0.00204803 1.32472e+07 50.2581 0.0047513 0.996873 0 50.087 GTEX-ZDTT-2726-SM-4WKF8 0 B1 6 pieces, well-trimmed, squamous epithelium is about 1.5-2% of thickness. 6.7 Skin Skin - Sun Exposed (Lower leg) 0004264 183 360 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991279 295660 0.973239 0.993327 0.823584 22947 1 76 0.00197808 213 0 7.35843e+07 0.0265269 482867 7.40786e+07 5.4536e+06 22968 3.66087e+07 0 0.149655 0.993327 0.818089 7.35843e+07 0.00281474 1.59744e+07 7.68718e+06 1.60513e+07 189 1.6026e+07 1.27817e+07 0.00239554 1.61519e+07 50.1956 0.00651831 0.995376 0 50.12 GTEX-ZDXO-0001-SM-4YUWF B1 Blood Whole Blood 0013756 1055 BP-35849 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/07/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZDXO-0001-SM-53UBX B1 Blood Whole Blood 0013756 1055 BP-35849 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/07/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZDXO-0001-SM-6UH3F B1 Blood Whole Blood 0013756 1055 BP-35849 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/07/2013 LCSET-6235 10/02/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZDXO-0006-SM-4WKGF B1 9 Blood Whole Blood 0013756 1056 BP-35899 RNA isolation_PAXgene Blood RNA (Manual) 02/07/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.984376 1.01273e+06 0.961782 0.986615 0.754579 21132 1 76 0.00255002 147 0 1.00592e+08 0.037275 240966 1.01956e+08 8.44907e+06 21153 4.99703e+07 0 0.207202 0.986615 0.744479 1.00592e+08 0.00365563 2.25007e+07 9.89782e+07 2.28072e+07 169 2.2838e+07 2.14496e+07 0.00310157 2.27245e+07 49.8755 0.00236342 0.988854 0 50.3383 GTEX-ZDXO-0008-SM-4E3HR B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1082 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990248 727222 0.973341 0.993118 0.856565 21041 1 76 0.00229193 222 0 9.71867e+07 0.0263576 398170 9.78602e+07 1.14848e+07 21056 4.83479e+07 0 0.116776 0.993118 0.85067 9.71867e+07 0.00325946 2.15201e+07 1.96308e+07 2.1707e+07 238 2.17939e+07 2.4672e+07 0.0027743 2.17128e+07 49.9069 0.00406876 0.995988 0 50.2162 GTEX-ZDXO-0011-R10a-SM-4WWD8 B1, A1 7.7 Brain Brain - Frontal Cortex (BA9) 0009834 993 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991477 690264 0.954351 0.993588 0.823656 23665 1 76 0.00252968 163 0 7.00316e+07 0.045291 2.42267e+06 7.04835e+07 5.5102e+06 23687 3.48512e+07 0 0.130695 0.993588 0.818375 7.00316e+07 0.00303296 1.52079e+07 1.47589e+07 1.53723e+07 200 1.52816e+07 8.56564e+06 0.00278078 1.54456e+07 50.2668 0.0343721 0.9957 0 50.2688 GTEX-ZDXO-0011-R10a-SM-AHZ7L B1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 993 ChIP-Seq GTEX-ZDXO-0011-R11a-SM-4WWD9 B1, A1 9 Brain Brain - Cerebellar Hemisphere 0002037 993 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989258 1.02911e+06 0.938142 0.991419 0.740856 24170 1 76 0.00277195 202 0 9.19753e+07 0.0614343 1.24459e+06 9.27714e+07 7.50516e+06 24205 4.57342e+07 0 0.197285 0.991419 0.734499 9.19753e+07 0.00323304 1.96144e+07 2.31605e+07 1.97255e+07 253 1.97586e+07 1.10334e+07 0.00300199 1.97843e+07 50.0325 0.0134157 0.99358 0 50.1412 GTEX-ZDXO-0011-R1a-SM-4WKF4 B1, A1 8.1 Brain Brain - Hippocampus 0001954 993 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988628 844038 0.959359 0.991062 0.842193 23844 1 76 0.00213469 370 0 8.58248e+07 0.0403162 4.95364e+06 8.65988e+07 6.62104e+06 23863 4.26769e+07 0 0.117167 0.991062 0.834665 8.58248e+07 0.00308857 1.86904e+07 2.32281e+07 1.90448e+07 332 1.88691e+07 8.8851e+06 0.00261046 1.90666e+07 50.2602 0.0572022 0.993496 0 50.4696 GTEX-ZDXO-0011-R2b-SM-4WKFG B1, A1 5.7 Brain Brain - Substantia nigra 0002038 993 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.99055 535062 0.971418 0.993177 0.848995 21507 1 76 0.00223993 374 0 9.13552e+07 0.0284601 9.24374e+06 9.19828e+07 7.05794e+06 21518 4.54206e+07 0 0.122424 0.993177 0.843202 9.13552e+07 0.00353139 1.98612e+07 2.84536e+07 2.04615e+07 385 2.01099e+07 6.14836e+06 0.00288395 2.04213e+07 50.3842 0.100494 0.995803 0 50.7443 GTEX-ZDXO-0011-R3a-SM-4WKFS B1, A1 7.1 Brain Brain - Anterior cingulate cortex (BA24) 0009835 993 BP-41209 RNA isolation_PAXgene Tissue miRNA 07/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990854 703207 0.962092 0.993248 0.846505 23783 1 76 0.00209639 268 0 8.04962e+07 0.0374996 4.30604e+06 8.10434e+07 6.10933e+06 23806 4.00101e+07 0 0.115587 0.993248 0.840789 8.04962e+07 0.00309074 1.76101e+07 1.62421e+07 1.7812e+07 281 1.77147e+07 9.50718e+06 0.00259236 1.78998e+07 50.2598 0.0531325 0.995642 0 50.285 GTEX-ZDXO-0011-R5a-SM-4WKG5 B1, A1 7.4 Brain Brain - Caudate (basal ganglia) 0001873 993 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.98879 821609 0.963958 0.991917 0.820274 25228 1 76 0.00222391 372 0 1.13034e+08 0.0358089 7.37068e+06 1.13955e+08 8.87801e+06 25263 5.61659e+07 0 0.143684 0.991917 0.813644 1.13034e+08 0.00320627 2.44124e+07 3.15184e+07 2.50957e+07 396 2.47628e+07 1.07826e+07 0.00271354 2.50644e+07 50.3027 0.0646804 0.995044 0 50.6902 GTEX-ZDXO-0011-R6a-SM-4WWCT B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 993 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989171 983040 0.949997 0.992233 0.81703 24055 1 76 0.00268004 267 0 8.61053e+07 0.0497146 5.2388e+06 8.67794e+07 7.37859e+06 24077 4.28027e+07 0 0.132966 0.992233 0.810684 8.61053e+07 0.00333515 1.85386e+07 2.86346e+07 1.8806e+07 307 1.87198e+07 9.23074e+06 0.00300659 1.89009e+07 50.2407 0.0603692 0.995294 0 50.358 GTEX-ZDXO-0011-R7a-SM-4WWCU B1, A1 6.5 Brain Brain - Putamen (basal ganglia) 0001874 993 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990379 605698 0.955519 0.993262 0.837477 21691 1 76 0.00277343 187 0 6.38962e+07 0.0443218 6.56149e+06 6.43297e+07 5.32861e+06 21702 3.17781e+07 0 0.118041 0.993262 0.831834 6.38962e+07 0.00344066 1.38237e+07 2.46534e+07 1.40209e+07 212 1.37646e+07 4.3591e+06 0.00310608 1.42815e+07 50.9216 0.101998 0.996144 0 50.3541 GTEX-ZDXO-0011-R8a-SM-4WWD7 B1, A1 7.8 Brain Brain - Hypothalamus 0001898 993 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988767 783382 0.951379 0.991893 0.823782 23520 1 76 0.00271193 158 0 6.38102e+07 0.0483484 3.15826e+06 6.43318e+07 5.35863e+06 23542 3.17119e+07 0 0.127596 0.991893 0.817104 6.38102e+07 0.00345679 1.38434e+07 2.08042e+07 1.39212e+07 190 1.38839e+07 6.32691e+06 0.00308319 1.40982e+07 50.3828 0.0490932 0.995019 0 50.1401 GTEX-ZDXO-0126-SM-5S2ND 1 B1 2 pieces, both ~50% fibrous tissue (rep areas delineated); rest adipose. No ductal elements 5.8 Breast Breast - Mammary Tissue 0008367 1141 1092 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.9929 142448 0.976569 0.994112 0.781206 22726 1 76 0.00192251 153 0 6.87797e+07 0.023168 485468 6.91871e+07 4.5432e+06 22750 3.42425e+07 0 0.195363 0.994112 0.776606 6.87797e+07 0.00269305 1.53224e+07 7.25235e+06 1.53582e+07 169 1.52786e+07 1.01279e+07 0.00230731 1.5482e+07 50.3307 0.00701674 0.995324 0 50.0583 GTEX-ZDXO-0226-SM-4WKH7 2 B1 6 pieces, glomeruli present in all pieces, moderately autolyzed tubules 6.2 Kidney Kidney - Cortex 0001225 1167 1070 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988375 234784 0.977784 0.991446 0.849405 23354 1 76 0.00225985 367 0 8.44304e+07 0.0220976 4.10035e+06 8.51589e+07 6.91765e+06 23370 4.19627e+07 0 0.128379 0.991446 0.842139 8.44304e+07 0.0035154 1.85539e+07 1.79426e+07 1.8991e+07 355 1.89668e+07 6.6011e+06 0.00288568 1.88058e+07 49.7869 0.0481494 0.994516 0 50.5821 GTEX-ZDXO-0326-SM-4WKHJ 0 B1 2 pieces, ~10% interstitial fat, delineated 8.3 Muscle Muscle - Skeletal 0011907 1078 1149 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.992177 367724 0.979095 0.994107 0.864009 21610 1 76 0.0017809 199 0 8.50811e+07 0.0206303 716432 8.55854e+07 6.61278e+06 21624 4.23613e+07 0 0.115086 0.994107 0.858917 8.50811e+07 0.00247942 1.79288e+07 8.26189e+06 1.8107e+07 208 1.80626e+07 1.8138e+07 0.00212948 1.81268e+07 50.0887 0.00837096 0.996037 0 50.2472 GTEX-ZDXO-0326-SM-CYKQS 0 B1 2 pieces, ~10% interstitial fat, delineated 8.3 Muscle Muscle - Skeletal 0011907 1078 1149 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 RIP-Seq GTEX-ZDXO-0426-SM-4WKF6 1 B1 2 pieces 6 Heart Heart - Atrial Appendage 0006631 1117 1112 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991384 356884 0.973317 0.993249 0.782891 22767 1 76 0.0020054 136 0 6.79211e+07 0.0264124 1.32025e+06 6.83828e+07 4.959e+06 22790 3.37879e+07 0 0.190427 0.993249 0.777605 6.79211e+07 0.00293829 1.45296e+07 6.08495e+06 1.46268e+07 158 1.46151e+07 1.07294e+07 0.00247097 1.46653e+07 50.0858 0.0193067 0.995113 0 50.1667 GTEX-ZDXO-0726-SM-57WBT 1 B1 2 pieces, minimal ischemic damage/interstitial fibrosis 7.1 Heart Heart - Left Ventricle 0006566 1126 1105 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.991856 243338 0.983694 0.993964 0.851402 20934 1 76 0.00197655 195 0 7.81181e+07 0.0161256 2.67286e+06 7.85925e+07 9.37548e+06 20948 3.89006e+07 0 0.132292 0.993964 0.846262 7.81181e+07 0.00360648 1.74947e+07 1.58592e+07 1.70894e+07 251 1.71511e+07 1.16838e+07 0.00278979 1.75559e+07 50.5831 0.0340091 0.996072 0 49.4139 GTEX-ZDXO-1326-SM-57WBS 2 B1 2 pieces, moderate edema/congestion, moderately-markedly autolyzed 6.7 Lung Lung 0008952 1132 1100 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.986702 346407 0.971293 0.990746 0.7346 22862 1 76 0.00236922 117 0 5.59685e+07 0.0283627 272324 5.64912e+07 6.86387e+06 22890 2.77748e+07 0 0.236694 0.990746 0.727802 5.59685e+07 0.00472322 1.22885e+07 5.68002e+06 1.23855e+07 127 1.24335e+07 7.96917e+06 0.00354142 1.24546e+07 50.0423 0.00482064 0.99479 0 50.1965 GTEX-ZDXO-1326-SM-CYKQX 2 B1 2 pieces, moderate edema/congestion, moderately-markedly autolyzed 6.7 Lung Lung 0008952 1132 1100 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 RIP-Seq GTEX-ZDXO-1426-SM-4WKHG 2 B1 2 pieces, moderately autolyzed, one with small nubbin of neurohypophysis (~2x0.5mm, delineated); rest adenohypophysis 5.9 Pituitary Pituitary 0000007 1265 978 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991064 230568 0.962983 0.992839 0.746987 23970 1 76 0.00213305 111 0 4.97972e+07 0.0367997 663086 5.01564e+07 3.71292e+06 24005 2.47818e+07 0 0.215997 0.992839 0.741637 4.97972e+07 0.00296165 1.07986e+07 5.76217e+06 1.08722e+07 122 1.08621e+07 6.43816e+06 0.00254661 1.08966e+07 50.0791 0.0132204 0.994613 0 50.1699 GTEX-ZDXO-1726-SM-5HL6L 2 B1 2 pieces, contaminant adipose tissue in one, delineated 6.2 Thyroid Thyroid 0002046 1121 1109 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806,LCSET-5073 03/04/2014 TruSeq.v1 RNASEQ 0.986564 248826 0.964923 0.991029 0.693582 26379 1 76 0.00240311 211 0 1.11743e+08 0.0348233 417003 1.12755e+08 1.30144e+07 26452 5.55566e+07 0 0.271341 0.991029 0.68736 1.11743e+08 0.00301 2.44729e+07 1.13221e+07 2.45697e+07 210 2.46659e+07 1.37144e+07 0.00270519 2.47736e+07 50.1089 0.00369831 0.995494 0 50.0987 GTEX-ZDXO-1926-SM-5E45Q 0 B1 2 pieces, good clean specimens, trace adherent fat, delineated 7.3 Nerve Nerve - Tibial 0001323 1079 1148 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4635 02/13/2014 TruSeq.v1 RNASEQ 0.985402 279169 0.969614 0.989839 0.78026 24600 1 76 0.00235502 168 0 8.02017e+07 0.0301237 550615 8.1025e+07 1.38945e+07 24639 3.98175e+07 0 0.189354 0.989839 0.772332 8.02017e+07 0.00533403 1.75863e+07 8.35726e+06 1.77259e+07 193 1.77831e+07 1.17955e+07 0.00383784 1.78674e+07 50.1183 0.00679562 0.994276 0 50.1977 GTEX-ZDXO-2126-SM-4WKFI 1 B1 2 pieces 6 Brain Brain - Cortex 0001870 1261 981 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.992427 435629 0.965271 0.994166 0.841783 23385 1 76 0.00216392 269 0 7.79256e+07 0.0344312 3.82900e+06 7.83829e+07 5.84281e+06 23399 3.87739e+07 0 0.123489 0.994166 0.836872 7.79256e+07 0.00305057 1.70917e+07 1.52009e+07 1.7261e+07 269 1.7103e+07 8.38203e+06 0.00260647 1.73813e+07 50.4035 0.04885 0.995905 0 50.2464 GTEX-ZDXO-2326-SM-5LU9W 1 B1 2 pieces, mimimal fibrous tissue, delineated 5.7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1168 1070 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4899 03/23/2014 TruSeq.v1 RNASEQ 0.988478 295542 0.972131 0.990881 0.768746 23382 1 76 0.0047855 139 0 6.60107e+07 0.0276306 700405 6.66181e+07 5.67149e+06 23405 3.27859e+07 0 0.203385 0.990881 0.761736 6.60107e+07 0.00417857 1.45627e+07 7.81029e+06 1.46091e+07 153 1.46008e+07 8.54373e+06 0.00448277 1.47236e+07 50.2093 0.0105137 0.993284 0 50.0797 GTEX-ZDXO-2426-SM-5S2NJ 0 B1 2 pieces, both ~60% contaminating fibroconnective tissue/fascia 7.7 Adipose Tissue Adipose - Subcutaneous 0002190 1075 1151 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991553 327412 0.977218 0.993808 0.818669 22859 1 76 0.00184586 135 0 6.44384e+07 0.0224756 187566 6.48398e+07 4.57563e+06 22876 3.20388e+07 0 0.158549 0.993808 0.8136 6.44384e+07 0.00286507 1.42329e+07 6.10273e+06 1.44084e+07 148 1.43795e+07 1.28136e+07 0.00235431 1.44081e+07 50.0496 0.00289276 0.996063 0 50.3065 GTEX-ZDXO-2726-SM-4WKFA 1 B1 6 pieces, adherent serosa/fat/vasa vasorum, /'0.5-1mm thick 7.1 Blood Vessel Artery - Aorta 0001496 1133 1100 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990189 264155 0.977241 0.992295 0.804532 23274 1 76 0.00219668 157 0 7.46584e+07 0.0223145 204037 7.52382e+07 5.89333e+06 23296 3.71056e+07 0 0.172709 0.992295 0.798333 7.46584e+07 0.00305415 1.63345e+07 6.81303e+06 1.63859e+07 170 1.63843e+07 1.40343e+07 0.00262451 1.64969e+07 50.1712 0.00271188 0.994401 0 50.0785 GTEX-ZDXO-2926-SM-4WKFM 1 B1 2 pieces. Some-- but not all -- Purkinje cells show nuclear loss c/w hypoxia antemortem, rep ones delineated 6.8 Brain Brain - Cerebellum 0002037 1268 975 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989058 278774 0.950574 0.991681 0.74152 23047 1 76 0.00231991 129 0 6.75291e+07 0.0490963 896814 6.80956e+07 5.43556e+06 23081 3.35719e+07 0 0.209053 0.991681 0.735352 6.75291e+07 0.00311113 1.45979e+07 9.74721e+06 1.47527e+07 161 1.4778e+07 7.98399e+06 0.00271447 1.47352e+07 49.9275 0.0131699 0.994304 0 50.2637 GTEX-ZDXO-3026-SM-5J1N5 0 B1 6 pieces, squamous epithelium is ~40-50 microns thick. Adherent dermal fat present in several sections, rep foci delineated 6.1 Skin Skin - Sun Exposed (Lower leg) 0004264 1073 1152 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.986053 321712 0.969663 0.988306 0.767194 24745 1 76 0.00425972 166 0 8.09138e+07 0.0301615 448853 8.18712e+07 4.62951e+06 24780 4.01829e+07 0 0.202469 0.988306 0.758223 8.09138e+07 0.00535061 1.77797e+07 9.84409e+06 1.78999e+07 177 1.78834e+07 1.15601e+07 0.00480392 1.79721e+07 50.1237 0.00548243 0.990559 0 50.1685 GTEX-ZDXO-3126-SM-5IJDF 0 B1 6 pieces. Squamous epithelium is ~30-45mcirons thick. Adherent dermal fat present focally, delineated 6 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1218 1023 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.988397 175568 0.973283 0.991297 0.745056 23789 1 76 0.00245295 125 0 6.02145e+07 0.0265235 347138 6.07431e+07 7.77914e+06 23819 2.99296e+07 0 0.228227 0.991297 0.738571 6.02145e+07 0.00415331 1.33717e+07 7.16328e+06 1.33747e+07 138 1.33695e+07 8.62798e+06 0.00330064 1.35445e+07 50.3251 0.00571485 0.994196 0 50.0055 GTEX-ZDYS-0002-SM-4WKGR C1 7.3 Blood Whole Blood 0013756 162 BP-35899 RNA isolation_PAXgene Blood RNA (Manual) 02/07/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.99079 589204 0.968468 0.992501 0.833805 21694 1 76 0.00244813 156 0 8.0628e+07 0.0309275 710764 8.12372e+07 6.21126e+06 21706 4.01122e+07 0 0.134663 0.992501 0.827552 8.0628e+07 0.00337351 1.7909e+07 3.75968e+07 1.8066e+07 179 1.80386e+07 1.58353e+07 0.00291002 1.80905e+07 50.0719 0.00874924 0.994211 0 50.2182 GTEX-ZDYS-0005-SM-4YUWR C1 Blood Whole Blood 0013756 162 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZDYS-0005-SM-53UBJ C1 Blood Whole Blood 0013756 162 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZDYS-0005-SM-6UH3G C1 Blood Whole Blood 0013756 162 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZDYS-0008-SM-4E3IX C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 206 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989605 920853 0.967924 0.992214 0.842019 22505 1 76 0.00242614 289 0 1.1409e+08 0.0317039 344761 1.14985e+08 1.24023e+07 22531 5.67633e+07 0 0.125905 0.992214 0.835463 1.1409e+08 0.0035615 2.50793e+07 2.45829e+07 2.5239e+07 303 2.53595e+07 2.5113e+07 0.00299233 2.52523e+07 49.8941 0.0029983 0.994823 0 50.1586 GTEX-ZDYS-0126-SM-5HL6X 0 C1 2 pieces, one piece is 90% fat with strip of vessel, second is 40% fat 8 Blood Vessel Artery - Coronary 0001621 145 442 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992788 252353 0.977065 0.994587 0.833033 23198 1 76 0.00200997 206 0 8.11813e+07 0.0226013 318452 8.16231e+07 8.15759e+06 23220 4.04274e+07 0 0.144032 0.994587 0.828524 8.11813e+07 0.00283469 1.78101e+07 7.64872e+06 1.79779e+07 232 1.7928e+07 1.50748e+07 0.00242158 1.79963e+07 50.095 0.00390149 0.996386 0 50.2344 GTEX-ZDYS-0226-SM-5HL4K 0 C1 2 pieces, each with ~5% fat; contraction bands seen 8.1 Heart Heart - Left Ventricle 0006566 148 440 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.989782 209027 0.984946 0.991828 0.845039 20960 1 76 0.00218202 268 0 8.49421e+07 0.0147863 1.97963e+06 8.5642e+07 9.67475e+06 20969 4.23066e+07 0 0.139907 0.991828 0.838133 8.49421e+07 0.00306752 1.82392e+07 2.87344e+07 1.84411e+07 261 1.82716e+07 1.31139e+07 0.00262386 1.85629e+07 50.3954 0.0231152 0.993874 0 50.2752 GTEX-ZDYS-0326-SM-5HL4W 0 C1 2 pieces, one with 5-10% adipose tissue. Interstitial and larger patches of fibrosis. 7 Heart Heart - Atrial Appendage 0006631 150 439 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.990987 145817 0.981593 0.993016 0.834056 20704 1 76 0.00220129 154 0 6.71287e+07 0.0181669 1.45561e+06 6.76008e+07 7.74045e+06 20717 3.34372e+07 0 0.147537 0.993016 0.82823 6.71287e+07 0.00304694 1.43331e+07 2.06365e+07 1.44396e+07 194 1.42216e+07 9.62144e+06 0.00262325 1.46721e+07 50.7796 0.0215325 0.995044 0 50.1851 GTEX-ZDYS-0426-SM-5IJEQ 0 C1 2 pieces, atelectasis, numerous hemosiderin-laden macrophages and focal hemorrhage. 7.3 Lung Lung 0008952 156 435 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.984965 200401 0.975326 0.987058 0.814511 24633 1 76 0.00489181 184 0 8.2599e+07 0.0241788 467103 8.3682e+07 5.68362e+06 24662 4.10465e+07 0 0.160814 0.987058 0.80397 8.2599e+07 0.00521681 1.83187e+07 1.45669e+07 1.86e+07 185 1.85837e+07 1.47957e+07 0.00505396 1.85029e+07 49.891 0.00558188 0.989151 0 50.381 GTEX-ZDYS-0526-SM-5L3EE 0 C1 6 pieces, atherosclerosis 7.3 Blood Vessel Artery - Aorta 0001496 158 434 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4822 03/23/2014 TruSeq.v1 RNASEQ 0.987449 208513 0.973887 0.991432 0.831568 21058 1 76 0.00311844 127 0 5.90732e+07 0.0256949 146396 5.95837e+07 6.16677e+06 21071 2.93481e+07 0 0.142319 0.991432 0.824443 5.90732e+07 0.00414685 1.27507e+07 5.13185e+06 1.28422e+07 131 1.28942e+07 1.15702e+07 0.00363058 1.29153e+07 50.0409 0.00245698 0.995414 0 50.1786 GTEX-ZDYS-0626-SM-5J2N5 1 C1 2 pieces, some degenerative change 7.3 Thyroid Thyroid 0002046 167 426 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4817 03/22/2014 TruSeq.v1 RNASEQ 0.98294 224752 0.968069 0.987191 0.752623 25433 1 76 0.0045589 140 0 8.48883e+07 0.0314883 340693 8.59898e+07 4.88723e+06 25480 4.21147e+07 0 0.215445 0.987191 0.742983 8.48883e+07 0.00631178 1.85595e+07 7.71615e+06 1.8662e+07 158 1.87656e+07 1.39737e+07 0.00543157 1.87871e+07 50.0286 0.00396202 0.991441 0 50.1378 GTEX-ZDYS-0726-SM-4WKGN 0 C1 6 pieces, good specimens, well-trimmed of mucosa 8 Esophagus Esophagus - Gastroesophageal Junction 0004550 169 424 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991142 255694 0.976731 0.993344 0.840526 22542 1 76 0.00204437 166 0 7.17258e+07 0.0229634 673508 7.22064e+07 5.53081e+06 22561 3.56968e+07 0 0.136205 0.993344 0.834932 7.17258e+07 0.00291643 1.55938e+07 7.11756e+06 1.58158e+07 185 1.57338e+07 1.20306e+07 0.00247943 1.58231e+07 50.1414 0.00932754 0.995546 0 50.3534 GTEX-ZDYS-0826-SM-4WWCR 0 C1 6 pieces 9.4 Esophagus Esophagus - Mucosa 0006920 171 423 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989789 337714 0.974589 0.992067 0.8174 22206 1 76 0.00271303 144 0 6.65926e+07 0.0248845 228389 6.71251e+07 5.63483e+06 22226 3.31389e+07 0 0.157189 0.992067 0.810916 6.65926e+07 0.00305929 1.50121e+07 1.11387e+07 1.50901e+07 143 1.51414e+07 1.38452e+07 0.00288576 1.51103e+07 49.9487 0.00340244 0.994346 0 50.1296 GTEX-ZDYS-0926-SM-4WWCS 0 C1 6 pieces, no residual mucosa 8.8 Esophagus Esophagus - Muscularis 0004648 173 421 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991737 325987 0.978619 0.994092 0.846213 22997 1 76 0.00244323 213 0 8.71306e+07 0.0210014 521396 8.76484e+07 7.24543e+06 23014 4.33645e+07 0 0.132405 0.994092 0.841214 8.71306e+07 0.00289742 1.88816e+07 7.648e+06 1.90623e+07 228 1.90515e+07 1.69412e+07 0.00266979 1.90898e+07 50.0502 0.00594872 0.996447 0 50.2381 GTEX-ZDYS-1026-SM-4WKHC 0 C1 2 pieces 6.7 Spleen Spleen 0002106 175 420 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989146 327868 0.958525 0.991513 0.759573 23438 1 76 0.00253612 128 0 6.12178e+07 0.0407843 505789 6.17418e+07 4.79016e+06 23467 3.04127e+07 0 0.198951 0.991513 0.753127 6.12178e+07 0.00346284 1.33764e+07 1.08501e+07 1.34454e+07 147 1.34193e+07 8.13565e+06 0.00299837 1.35493e+07 50.2409 0.008192 0.993881 0 50.1285 GTEX-ZDYS-1126-SM-5K7UB 1 C1 2 pieces, one piece ~15% fibrous tissue, defects centrally in both (poor fixation) , essentially no ductal elements. 7.2 Breast Breast - Mammary Tissue 0008367 178 417 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4818 03/13/2014 TruSeq.v1 RNASEQ 0.985463 201927 0.979053 0.987752 0.840355 22202 1 76 0.00440984 173 0 8.25719e+07 0.0206108 477795 8.35958e+07 5.42660e+06 22227 4.10584e+07 0 0.138699 0.987752 0.830062 8.25719e+07 0.00493221 1.82566e+07 7.8245e+06 1.8486e+07 190 1.84613e+07 1.46581e+07 0.00467042 1.84621e+07 50.0011 0.00571554 0.990041 0 50.3122 GTEX-ZDYS-1226-SM-5IJF3 1 C1 2 pieces 7.5 Prostate Prostate 0002367 181 415 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.986352 501930 0.950285 0.988414 0.765101 25348 1 76 0.004895 162 0 8.69211e+07 0.0493987 507675 8.794e+07 6.03285e+06 25381 4.32081e+07 0 0.185184 0.988414 0.756237 8.69211e+07 0.00521803 1.85911e+07 2.7877e+07 1.89415e+07 189 1.89306e+07 1.22138e+07 0.00505618 1.87772e+07 49.7966 0.00577297 0.990476 0 50.4669 GTEX-ZDYS-1326-SM-5IJFF 1 C1 2 pieces, active spermatogenesis 7.1 Testis Testis 0000473 183 417 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4815 03/13/2014 TruSeq.v1 RNASEQ 0.987325 259413 0.931148 0.988791 0.734393 33158 1 76 0.00474516 151 0 8.52642e+07 0.0685255 739627 8.62308e+07 5.68568e+06 33229 4.24147e+07 0 0.196755 0.988791 0.726161 8.52642e+07 0.0047238 1.78049e+07 1.13659e+07 1.78743e+07 157 1.79295e+07 1.43951e+07 0.0047345 1.78674e+07 49.9132 0.00857729 0.990257 0 50.0973 GTEX-ZDYS-1526-SM-4WKFY 0 C1 2 pieces, ~5% fat (internal and attached) on one piece 5.9 Nerve Nerve - Tibial 0001323 186 414 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990698 297747 0.973359 0.993263 0.807466 23164 1 76 0.00197529 169 0 7.30856e+07 0.026343 318502 7.35813e+07 5.43877e+06 23187 3.63504e+07 0 0.165893 0.993263 0.802026 7.30856e+07 0.00284288 1.61105e+07 6.45957e+06 1.61739e+07 177 1.61777e+07 1.25793e+07 0.00240796 1.62912e+07 50.1747 0.00432857 0.995828 0 50.0982 GTEX-ZDYS-1626-SM-4WKGB 0 C1 2 pieces, well-trimmed of fat 7.9 Blood Vessel Artery - Tibial 0007610 190 411 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991737 381643 0.975171 0.993761 0.854085 21275 1 76 0.00194139 160 0 7.17751e+07 0.0244778 604592 7.22257e+07 5.53069e+06 21286 3.57112e+07 0 0.121087 0.993761 0.848757 7.17751e+07 0.00292712 1.53911e+07 6.82116e+06 1.55501e+07 178 1.54891e+07 1.33921e+07 0.00243325 1.55981e+07 50.1752 0.00837087 0.995786 0 50.2569 GTEX-ZDYS-1726-SM-5HL4Y 0 C1 2 pieces, skeletal muscle with <10% attached/internal fat, attached portion of tendon 7.9 Muscle Muscle - Skeletal 0011907 197 405 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.992623 149504 0.983972 0.994653 0.872587 19581 1 76 0.00202528 135 0 6.21354e+07 0.0158253 743298 6.24694e+07 6.71499e+06 19588 3.09465e+07 0 0.111385 0.994653 0.867922 6.21354e+07 0.00306439 1.35375e+07 8.26571e+06 1.3646e+07 153 1.35682e+07 1.19596e+07 0.00254377 1.37307e+07 50.2976 0.0118986 0.996683 0 50.1997 GTEX-ZDYS-1926-SM-5HL59 2 C1 6 pieces, mucosa (2), muscularis (1) 6.7 Stomach Stomach 0000945 203 400 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.986299 142810 0.98194 0.988166 0.859162 21481 1 76 0.00204614 240 0 6.7543e+07 0.0176377 932957 6.83519e+07 7.65218e+06 21492 3.36322e+07 0 0.122778 0.988166 0.848994 6.7543e+07 0.00301625 1.54718e+07 6.97139e+07 1.56468e+07 181 1.56266e+07 1.67861e+07 0.00253028 1.56104e+07 49.9741 0.0136493 0.990033 0 50.2812 GTEX-ZDYS-2026-SM-5HL5L 0 C1 6 pieces, dermal fat present in several sections, squamous epithelium is ~40-50 microns thick. 7.6 Skin Skin - Sun Exposed (Lower leg) 0004264 205 398 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991287 179281 0.975472 0.993319 0.82784 22885 1 76 0.00221692 165 0 6.48863e+07 0.02427 329349 6.53227e+07 7.07418e+06 22904 3.23085e+07 0 0.147632 0.993319 0.822309 6.48863e+07 0.00320595 1.42229e+07 7.91874e+06 1.43713e+07 158 1.43312e+07 1.13136e+07 0.00271042 1.43915e+07 50.105 0.00504188 0.995351 0 50.2595 GTEX-ZDYS-2126-SM-5S2OD 1 C1 2 pieces, one piece with central defect (poor fixation) and attached vessel, second piece is 10-20% fibroconnective tissue 8 Adipose Tissue Adipose - Subcutaneous 0002190 208 396 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.99224 193324 0.978379 0.994358 0.834733 21141 1 76 0.00178566 129 0 5.49228e+07 0.0212724 291572 5.52344e+07 3.93738e+06 21155 2.73363e+07 0 0.143646 0.994358 0.830024 5.49228e+07 0.00256099 1.2045e+07 5.12742e+06 1.21727e+07 137 1.21381e+07 9.99963e+06 0.0021725 1.21942e+07 50.1153 0.00527881 0.996476 0 50.2637 GTEX-ZDYS-2126-SM-5S2P2 1 C1 2 pieces, one piece with central defect (poor fixation) and attached vessel, second piece is 10-20% fibroconnective tissue 6.9 Adipose Tissue Adipose - Subcutaneous 0002190 208 396 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991977 185812 0.978631 0.993667 0.834106 21474 1 76 0.00183657 153 0 6.70607e+07 0.0210364 341475 6.74881e+07 4.87353e+06 21488 3.33662e+07 0 0.144526 0.993667 0.828823 6.70607e+07 0.00264833 1.48471e+07 5.83632e+06 1.49456e+07 169 1.48771e+07 1.16833e+07 0.00224176 1.50274e+07 50.2513 0.00505978 0.995357 0 50.1653 GTEX-ZDYS-2226-SM-5S2MI 1 C1 2 pieces, both have central defects (poor fixation), ~10% fibroconnective tissue, vessels, and nerve in both 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 211 396 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990985 220739 0.978199 0.992637 0.823477 22065 1 76 0.00196869 165 0 7.04461e+07 0.0215084 733149 7.09686e+07 4.79453e+06 22087 3.50499e+07 0 0.154722 0.992637 0.817414 7.04461e+07 0.00287777 1.54725e+07 1.03352e+07 1.56358e+07 190 1.5472e+07 1.04171e+07 0.00242247 1.5749e+07 50.4437 0.0103306 0.994289 0 50.2625 GTEX-ZDYS-2326-SM-4WKG6 1 C1 6 pieces 8.8 Colon Colon - Transverse 0001157 213 394 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987706 311450 0.977158 0.990414 0.843296 24313 1 76 0.00262183 291 0 1.10628e+08 0.0212407 1.58934e+06 1.11699e+08 9.33471e+06 24340 5.49579e+07 0 0.133862 0.990414 0.835212 1.10628e+08 0.00335853 2.43757e+07 1.55429e+07 2.47404e+07 328 2.46732e+07 1.81717e+07 0.00298917 2.471e+07 50.0373 0.0142288 0.993123 0 50.3713 GTEX-ZDYS-2426-SM-4WKGI 1 C1 6 pieces, 5-20% dermal fat 8.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 216 392 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991235 330774 0.973424 0.993308 0.814576 23745 1 76 0.00211985 226 0 8.43081e+07 0.0263608 644092 8.48762e+07 6.57638e+06 23772 4.19514e+07 0 0.158848 0.993308 0.809125 8.43081e+07 0.00284598 1.85077e+07 9.74707e+06 1.86919e+07 218 1.86432e+07 1.39783e+07 0.00248216 1.87292e+07 50.115 0.00758861 0.99538 0 50.2477 GTEX-ZDYS-2526-SM-4WKGU 2 C1 2 pieces 6.3 Pancreas Pancreas 0001150 218 391 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991585 313062 0.978344 0.993289 0.847351 21895 1 76 0.00236631 111 0 7.94948e+07 0.0213735 330972 8.00319e+07 6.14058e+06 21917 3.95613e+07 0 0.130993 0.993289 0.841665 7.94948e+07 0.00325028 1.81663e+07 2.14421e+07 1.83737e+07 127 1.82614e+07 2.22464e+07 0.00280754 1.84162e+07 50.2111 0.0041355 0.994994 0 50.2839 GTEX-ZE7O-0002-SM-4YUXG B1 Blood Whole Blood 0013756 1015 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZE7O-0002-SM-53UBF B1 Blood Whole Blood 0013756 1015 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZE7O-0002-SM-6UH3I B1 Blood Whole Blood 0013756 1015 BP-35923 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/11/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZE7O-0006-SM-51MTA B1 7.4 Blood Whole Blood 0013756 1015 BP-35939 RNA isolation_PAXgene Blood RNA (Manual) 02/11/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.966454 743603 0.959437 0.970917 0.772857 19232 1 76 0.0030309 114 0 7.51857e+07 0.0393419 705904 7.74378e+07 1.76457e+07 19241 3.72839e+07 0 0.18658 0.970917 0.75038 7.51857e+07 0.00650041 1.69889e+07 1.12182e+08 1.69836e+07 126 1.70135e+07 1.6771e+07 0.00475768 1.73368e+07 50.4707 0.00911576 0.975381 0 49.9922 GTEX-ZE7O-0008-SM-4E3JQ B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 1066 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990787 625926 0.96766 0.993269 0.848838 20150 1 76 0.00225688 151 0 7.08724e+07 0.0319948 393388 7.13526e+07 7.28457e+06 20169 3.52638e+07 0 0.118823 0.993269 0.843124 7.08724e+07 0.00308776 1.56796e+07 1.67589e+07 1.57654e+07 148 1.58355e+07 1.74267e+07 0.00267128 1.57864e+07 49.9223 0.00551329 0.99575 0 50.1363 GTEX-ZE7O-0011-R10a-SM-57WAZ B1, A1 6.2 Brain Brain - Frontal Cortex (BA9) 0009834 1039 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987209 584259 0.952755 0.990057 0.8144 22524 1 76 0.00184175 176 0 6.52244e+07 0.0469546 3.22223e+06 6.58795e+07 7.67995e+06 22538 3.24405e+07 0 0.138356 0.990057 0.806302 6.52244e+07 0.0037481 1.4131e+07 1.38366e+07 1.43734e+07 182 1.422e+07 8.21834e+06 0.00279218 1.44601e+07 50.4185 0.0489111 0.992906 0 50.4252 GTEX-ZE7O-0011-R11a-SM-57WBC B1, A1 8.2 Brain Brain - Cerebellar Hemisphere 0002037 1039 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987999 603572 0.942587 0.991497 0.753085 23171 1 76 0.00208984 155 0 7.25162e+07 0.0571465 1.82568e+06 7.31382e+07 8.86833e+06 23195 3.60342e+07 0 0.189502 0.991497 0.746681 7.25162e+07 0.00447757 1.5527e+07 1.63822e+07 1.55661e+07 198 1.55921e+07 7.02802e+06 0.00327949 1.57329e+07 50.2248 0.024962 0.994995 0 50.0629 GTEX-ZE7O-0011-R1a-SM-57WDM B1, A1 5.7 Brain Brain - Hippocampus 0001954 1039 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.987988 619848 0.971794 0.991005 0.836472 21172 1 76 0.0017482 515 0 1.06575e+08 0.0281339 1.76056e+07 1.07542e+08 1.17296e+07 21184 5.29741e+07 0 0.135321 0.991005 0.828948 1.06575e+08 0.00372819 2.33129e+07 5.61524e+07 2.31943e+07 449 2.24565e+07 4.51452e+06 0.00273518 2.42875e+07 51.9585 0.163709 0.994022 0 49.8726 GTEX-ZE7O-0011-R5a-SM-57WBO B1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 1039 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990013 577177 0.957577 0.993169 0.81442 23452 1 76 0.00183287 195 0 6.97875e+07 0.042175 5.11007e+06 7.02675e+07 7.99962e+06 23467 3.47058e+07 0 0.143157 0.993169 0.808856 6.97875e+07 0.00391417 1.50807e+07 2.29778e+07 1.50999e+07 233 1.49747e+07 6.34877e+06 0.00287021 1.54042e+07 50.7068 0.0727231 0.996324 0 50.0318 GTEX-ZE7O-0011-R6a-SM-57WCI B1, A1 6.9 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 1039 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.988044 527952 0.963179 0.99194 0.833862 22328 1 76 0.0018531 264 0 7.00495e+07 0.0367039 8.73456e+06 7.06187e+07 9.05551e+06 22338 3.47957e+07 0 0.129317 0.99194 0.827141 7.00495e+07 0.00419621 1.53772e+07 2.40943e+07 1.5258e+07 271 1.50681e+07 4.21769e+06 0.00302005 1.57943e+07 51.1765 0.123686 0.995836 0 49.8055 GTEX-ZE7O-0011-R7a-SM-57WCU B1, A1 6 Brain Brain - Putamen (basal ganglia) 0001874 1039 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.988785 503889 0.96611 0.992329 0.847676 20869 1 76 0.00184036 369 0 7.57263e+07 0.0337843 1.09103e+07 7.63117e+07 9.25086e+06 20878 3.76334e+07 0 0.118433 0.992329 0.841174 7.57263e+07 0.00377045 1.66126e+07 2.50161e+07 1.66368e+07 349 1.62323e+07 4.93097e+06 0.00280196 1.72514e+07 51.5219 0.14297 0.995873 0 50.0365 GTEX-ZE7O-0126-SM-57WC1 1 B1 6 pieces; 10-30% subcutaneous fat 7.2 Skin Skin - Sun Exposed (Lower leg) 0004264 1065 1116 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989098 400685 0.975157 0.992142 0.809135 23993 1 76 0.00200182 228 0 8.76225e+07 0.0245555 614610 8.83165e+07 1.08231e+07 24017 4.35668e+07 0 0.166022 0.992142 0.802777 8.76225e+07 0.00380571 1.92343e+07 1.02637e+07 1.93593e+07 220 1.93897e+07 1.54897e+07 0.002901 1.94585e+07 50.0886 0.00695918 0.995186 0 50.162 GTEX-ZE7O-0226-SM-5S2N1 1 B1 2 pieces 6.5 Adipose Tissue Adipose - Subcutaneous 0002190 1068 1114 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990672 143853 0.977579 0.992195 0.802376 21661 1 76 0.00191193 155 0 6.90467e+07 0.0220643 453814 6.95898e+07 4.93912e+06 21681 3.43475e+07 0 0.175203 0.992195 0.796113 6.90467e+07 0.00264812 1.5157e+07 7.12086e+06 1.52812e+07 169 1.52147e+07 1.19779e+07 0.00227946 1.53322e+07 50.1923 0.00652127 0.993718 0 50.2039 GTEX-ZE7O-0326-SM-51MTH 1 B1 2 pieces; one has 2 mm, 40%, fat between two muscle bundles 6.9 Muscle Muscle - Skeletal 0011907 1074 1108 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.986468 379720 0.972644 0.98994 0.861198 21248 1 76 0.00228706 200 0 8.78771e+07 0.0271787 1.76012e+06 8.87702e+07 1.79054e+07 21261 4.36994e+07 0 0.111446 0.98994 0.852534 8.78771e+07 0.00493677 1.90544e+07 1.5583e+07 1.90791e+07 232 1.90951e+07 1.6187e+07 0.00360727 1.93264e+07 50.301 0.0198279 0.993411 0 50.0323 GTEX-ZE7O-0626-SM-57WCD 1 B1 2 pieces, 1 with 50% fat 6.5 Heart Heart - Atrial Appendage 0006631 1164 1019 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990154 307531 0.978282 0.993013 0.836037 21684 1 76 0.00191106 133 0 6.16392e+07 0.0214587 2.55684e+06 6.2073e+07 7.49342e+06 21698 3.06483e+07 0 0.142245 0.993013 0.830196 6.16392e+07 0.00391474 1.35141e+07 7.91959e+06 1.35004e+07 159 1.35271e+07 9.77292e+06 0.00291002 1.3644e+07 50.215 0.0411908 0.995871 0 49.9748 GTEX-ZE7O-0826-SM-57WCP 2 B1 2 pieces; emphysema, hemorrhage, fibrosis, carbon deposits 5.7 Lung Lung 0008952 1169 1015 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.983207 524486 0.958047 0.985438 0.745487 25858 1 76 0.0022525 170 0 8.26388e+07 0.0416291 363996 8.386e+07 9.8466e+06 25903 4.10745e+07 0 0.21256 0.985438 0.734631 8.26388e+07 0.0039623 1.77927e+07 1.54544e+07 1.8064e+07 187 1.80253e+07 1.24362e+07 0.00310546 1.8012e+07 49.9815 0.00434052 0.987668 0 50.3783 GTEX-ZE7O-1126-SM-57WC8 2 B1 2 pieces; 1, 80% fat and piece of parathyroid (marked). Other piece, nodular with poor preservation. 6.2 Thyroid Thyroid 0002046 1186 1000 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.988026 326237 0.965916 0.99073 0.767769 23761 1 76 0.00214792 121 0 5.35493e+07 0.0337349 303415 5.40504e+07 6.8476e+06 23777 2.66037e+07 0 0.198146 0.99073 0.760652 5.35493e+07 0.00404627 1.16324e+07 7.64203e+06 1.17535e+07 127 1.1762e+07 8.67304e+06 0.0030945 1.17655e+07 50.0075 0.00561356 0.993434 0 50.2587 GTEX-ZE7O-1526-SM-5J1NH 1 B1 2 pieces 5.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1196 991 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.982724 191425 0.972255 0.984249 0.791303 23472 1 76 0.00428195 163 0 7.90109e+07 0.0273353 633610 8.02753e+07 5.08692e+06 23496 3.91963e+07 0 0.180952 0.984249 0.77884 7.90109e+07 0.00515759 1.72893e+07 1.20889e+07 1.7381e+07 176 1.73789e+07 1.30211e+07 0.00471909 1.74169e+07 50.0546 0.00789297 0.985775 0 50.1322 GTEX-ZE7O-2426-SM-57WD7 2 B1 6 pieces, mucosa mostly sloughed 6.3 Vagina Vagina 0000996 1222 970 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415,LCSET-4788 01/11/2014 TruSeq.v1 RNASEQ 0.989592 822516 0.969661 0.992052 0.768987 27692 1 76 0.0023886 384 0 1.49276e+08 0.0299027 500443 1.50472e+08 3.68333e+07 27749 7.41966e+07 0 0.200675 0.992052 0.762875 1.49276e+08 0.00403985 3.27852e+07 2.11271e+07 3.3145e+07 406 3.31378e+07 2.59636e+07 0.00321218 3.31585e+07 50.0156 0.00332583 0.994512 0 50.2729 GTEX-ZE7O-2626-SM-51MSS 1 B1 6 pieces; well trimmed muscle and adjacent stroma 6.4 Colon Colon - Sigmoid 0001159 1233 959 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.982732 203305 0.963832 0.987762 0.826554 21967 1 76 0.00252409 134 0 6.10992e+07 0.0359902 1.25735e+06 6.18562e+07 1.29346e+07 21980 3.03011e+07 0 0.137278 0.987762 0.816439 6.10992e+07 0.00557368 1.29782e+07 8.91051e+06 1.30434e+07 163 1.30405e+07 7.83461e+06 0.00404112 1.3265e+07 50.4267 0.020327 0.992792 0 50.1253 GTEX-ZE7O-2726-SM-51MT5 1 B1 6 pieces; all with excessive subcutaneous fat, up to 2.9mm thick 7.5 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1229 965 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.986046 242043 0.976089 0.990544 0.836099 21296 1 76 0.00252343 136 0 5.70315e+07 0.0235727 412424 5.75759e+07 1.17705e+07 21316 2.83012e+07 0 0.139991 0.990544 0.828193 5.70315e+07 0.0053246 1.24627e+07 8.78652e+06 1.25294e+07 143 1.25622e+07 9.96365e+06 0.00391765 1.26795e+07 50.2322 0.00716314 0.995042 0 50.1333 GTEX-ZE7O-2926-SM-51MSG 1 B1 3 pieces: 1, 50% gland, 50% muscle; 1, 20% gland, 80% fat and muscle; 1, all muscle (images labeled) 7 Salivary Gland Minor Salivary Gland 0006330 1240 954 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.983578 224968 0.971446 0.988058 0.81519 23597 1 76 0.00271471 161 0 7.12342e+07 0.027395 804686 7.20952e+07 1.47647e+07 23617 3.53374e+07 0 0.156256 0.988058 0.805455 7.12342e+07 0.00549155 1.60048e+07 1.49927e+07 1.59786e+07 178 1.60258e+07 1.02318e+07 0.00409683 1.62621e+07 50.366 0.0111614 0.992537 0 49.9592 GTEX-ZE7O-3026-SM-51MS4 1 B1 4 pieces; all muscle no mucosa 5.9 Stomach Stomach 0000945 1244 951 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4207 11/20/2013 TruSeq.v1 RNASEQ 0.981013 190445 0.968132 0.985531 0.829191 22728 1 76 0.00255063 149 0 6.42178e+07 0.0316412 2.0121e+06 6.51606e+07 1.37259e+07 22744 3.1862e+07 0 0.138941 0.985531 0.817193 6.42178e+07 0.00552223 1.40514e+07 1.04307e+07 1.4061e+07 176 1.40431e+07 8.29718e+06 0.00402962 1.43447e+07 50.5311 0.0308791 0.990048 0 50.017 GTEX-ZE7O-3126-SM-5HL5X 1 B1 2 pieces 5.8 Brain Brain - Cortex 0001870 1284 912 BP-45395 RNA Extraction from Paxgene-derived Lysate Plate Based 11/01/2013 LCSET-4806 03/02/2014 TruSeq.v1 RNASEQ 0.991633 284022 0.965252 0.993816 0.849822 22287 1 76 0.00203566 196 0 6.32534e+07 0.0344949 4.27497e+06 6.3647e+07 7.02489e+06 22300 3.14865e+07 0 0.115429 0.993816 0.844567 6.32534e+07 0.00304042 1.37479e+07 1.46321e+07 1.4071e+07 209 1.38801e+07 6.39572e+06 0.00253694 1.4062e+07 50.3255 0.0671668 0.995999 0 50.5806 GTEX-ZE9C-0006-SM-4WKG2 C1 7 Blood Whole Blood 0013756 538 BP-36173 RNA isolation_PAXgene Blood RNA (Manual) 02/15/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.986098 691745 0.967183 0.988288 0.767569 21335 1 76 0.00254821 183 0 9.01473e+07 0.0320393 121862 9.12157e+07 7.20821e+06 21365 4.47785e+07 0 0.199615 0.988288 0.758579 9.01473e+07 0.00385624 2.02414e+07 6.63263e+07 2.04285e+07 188 2.04709e+07 1.68404e+07 0.00320078 2.04203e+07 49.9381 0.00133598 0.990478 0 50.2301 GTEX-ZE9C-0008-SM-4E3K6 C1 9.7 Skin Cells - Cultured fibroblasts EFO_0002009 683 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990718 768087 0.969591 0.99333 0.853197 21244 1 76 0.00234165 176 0 8.92131e+07 0.0300675 275056 8.98121e+07 1.01469e+07 21261 4.43807e+07 0 0.116394 0.99333 0.847507 8.92131e+07 0.00330784 1.97476e+07 1.96456e+07 1.99357e+07 202 2.00491e+07 2.20185e+07 0.00282347 1.98652e+07 49.7697 0.00306257 0.995943 0 50.237 GTEX-ZE9C-0011-R11a-SM-4WKGG C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 597 BP-42240 RNA isolation_PAXgene Tissue miRNA 08/13/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.99062 576503 0.944331 0.992488 0.767567 22586 1 76 0.00233638 198 0 7.84326e+07 0.0554222 4.11202e+06 7.90263e+07 5.76152e+06 22612 3.90124e+07 0 0.176764 0.992488 0.761801 7.84326e+07 0.00324564 1.68487e+07 1.79304e+07 1.70777e+07 247 1.69987e+07 6.46511e+06 0.00279016 1.70684e+07 50.1023 0.0520335 0.994356 0 50.3375 GTEX-ZE9C-0011-R2a-SM-4WKGH C1, A1 6 Brain Brain - Substantia nigra 0002038 597 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.964019 899319 0.938508 0.966199 0.799707 22093 1 76 0.00232702 284 0 8.27584e+07 0.0612396 7.06975e+06 8.56536e+07 6.57474e+06 22104 4.11185e+07 0 0.138801 0.966199 0.772676 8.27584e+07 0.00328887 1.78457e+07 2.99782e+07 1.82603e+07 293 1.78714e+07 7.72986e+06 0.00280686 1.84297e+07 50.769 0.0825389 0.96838 0 50.5741 GTEX-ZE9C-0011-R3a-SM-4WKGT C1, A1 6.2 Brain Brain - Anterior cingulate cortex (BA24) 0009835 597 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990906 802748 0.957739 0.99266 0.837381 23815 1 76 0.00223355 372 0 9.87615e+07 0.0420605 1.101e+07 9.94918e+07 7.55593e+06 23835 4.91207e+07 0 0.120358 0.99266 0.831234 9.87615e+07 0.00318967 2.14505e+07 2.37689e+07 2.20111e+07 408 2.16933e+07 8.15816e+06 0.00271077 2.1938e+07 50.2804 0.110663 0.994413 0 50.645 GTEX-ZE9C-0011-R4a-SM-4WKH6 C1, A1 5.1 Brain Brain - Amygdala 0001876 597 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990678 441560 0.972371 0.992692 0.85956 21056 1 76 0.00237062 367 0 8.78623e+07 0.0275321 1.68365e+07 8.85092e+07 6.2688e+06 21069 4.3709e+07 0 0.112811 0.992692 0.853279 8.78623e+07 0.00321843 1.93247e+07 2.9341e+07 1.9825e+07 378 1.94238e+07 4.56163e+06 0.00279367 1.98787e+07 50.5787 0.190223 0.994706 0 50.6391 GTEX-ZE9C-0011-R5a-SM-5EGLO C1, A1 8 Brain Brain - Caudate (basal ganglia) 0001873 597 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4766,LCSET-4797 02/11/2014 TruSeq.v1 RNASEQ 0.989524 735627 0.959615 0.992035 0.827718 23933 1 76 0.00200157 370 0 9.49074e+07 0.0401376 9.11505e+06 9.56694e+07 8.03552e+06 23950 4.72192e+07 0 0.131897 0.992035 0.821126 9.49074e+07 0.00308879 2.05446e+07 3.32713e+07 2.07622e+07 343 2.0557e+07 8.95775e+06 0.0025438 2.09707e+07 50.4982 0.0952766 0.994546 0 50.2633 GTEX-ZE9C-0011-R6a-SM-4WWCW C1, A1 7.6 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 597 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990725 859402 0.953906 0.993206 0.831498 23682 1 76 0.00272148 267 0 8.71223e+07 0.045849 7.98127e+06 8.77182e+07 7.41622e+06 23701 4.33483e+07 0 0.122407 0.993206 0.825849 8.71223e+07 0.0032162 1.88603e+07 2.75436e+07 1.91539e+07 316 1.90463e+07 8.67198e+06 0.00296822 1.91986e+07 50.199 0.0909876 0.995687 0 50.3861 GTEX-ZE9C-0011-R7a-SM-4WWCX C1, A1 6.7 Brain Brain - Putamen (basal ganglia) 0001874 597 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988373 951547 0.948479 0.991644 0.837546 23135 1 76 0.00276278 266 0 8.24871e+07 0.0513259 8.70978e+06 8.31823e+07 7.27405e+06 23147 4.10005e+07 0 0.110933 0.991644 0.830547 8.24871e+07 0.00344099 1.78254e+07 3.18262e+07 1.80286e+07 327 1.78632e+07 7.17854e+06 0.00310077 1.82756e+07 50.5706 0.104707 0.994914 0 50.2835 GTEX-ZE9C-0011-R9a-SM-4WWCY C1, A1 6.2 Brain Brain - Spinal cord (cervical c-1) 0006469 597 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991237 845444 0.953531 0.993278 0.81186 24151 1 76 0.00247866 402 0 1.18609e+08 0.0460633 4.77644e+06 1.19412e+08 9.37757e+06 24181 5.89598e+07 0 0.141672 0.993278 0.806402 1.18609e+08 0.00294721 2.62272e+07 2.23541e+07 2.66746e+07 386 2.63257e+07 1.67187e+07 0.00271245 2.68083e+07 50.4541 0.0399997 0.995319 0 50.4229 GTEX-ZE9C-0726-SM-4WKGA 1 C1 6 pieces, 50--100microns atherotic deposition 6.2 Blood Vessel Artery - Aorta 0001496 635 1309 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987413 241120 0.970252 0.989971 0.76417 22239 1 76 0.00227157 129 0 6.05833e+07 0.0294135 223539 6.1197e+07 4.77567e+06 22261 3.00853e+07 0 0.206082 0.989971 0.756507 6.05833e+07 0.00339559 1.31366e+07 5.48781e+06 1.31894e+07 139 1.31934e+07 9.8665e+06 0.00283213 1.32861e+07 50.1751 0.00365278 0.99253 0 50.1003 GTEX-ZE9C-1126-SM-4WWBD 2 C1 6 pieces, squamous mucosa beginning to slough, a few submucosal glands noted, rep ones delineated 7.2 Esophagus Esophagus - Mucosa 0006920 645 1302 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.98862 961787 0.954521 0.9912 0.78561 22610 1 76 0.00274995 207 0 9.38541e+07 0.0451392 725392 9.46874e+07 8.1539e+06 22632 4.6674e+07 0 0.168911 0.9912 0.778697 9.38541e+07 0.0034448 2.06144e+07 3.10867e+07 2.07828e+07 230 2.07911e+07 1.48847e+07 0.00309647 2.08648e+07 50.0886 0.00766092 0.993779 0 50.2034 GTEX-ZE9C-1326-SM-5S2OW 1 C1 2 pieces, virtually no vessels, good specimens 6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 648 1302 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991243 259433 0.976428 0.993139 0.793786 22285 1 76 0.00194387 135 0 6.19172e+07 0.0232586 281414 6.2345e+07 4.64336e+06 22303 3.07885e+07 0 0.182642 0.993139 0.788339 6.19172e+07 0.002827 1.36606e+07 6.49172e+06 1.38035e+07 147 1.37715e+07 1.08245e+07 0.00238459 1.38088e+07 50.0676 0.00451382 0.995034 0 50.2602 GTEX-ZE9C-1426-SM-4WKGM 2 C1 6 pieces, pronounced glomerulosclerosis/chronic interstitial nephritis, fibrosis 6.1 Kidney Kidney - Cortex 0001225 650 1301 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987691 342380 0.960795 0.990097 0.710305 24966 1 76 0.00241138 141 0 7.28562e+07 0.0389457 1.03502e+06 7.35849e+07 5.9955e+06 25017 3.61916e+07 0 0.250489 0.990097 0.703271 7.28562e+07 0.00343143 1.58437e+07 7.97605e+06 1.59548e+07 163 1.59589e+07 9.0949e+06 0.00292017 1.60136e+07 50.0855 0.0140656 0.992504 0 50.1747 GTEX-ZE9C-2126-SM-4WKGY 1 C1 6 pieces, all muscularis, good specimens 6.6 Colon Colon - Sigmoid 0001159 673 1282 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988769 279674 0.973875 0.991222 0.830595 22685 1 76 0.00201811 205 0 8.24845e+07 0.0258934 633459 8.3215e+07 6.54784e+06 22705 4.10041e+07 0 0.143281 0.991222 0.823303 8.24845e+07 0.00291541 1.77862e+07 9.08126e+06 1.7823e+07 217 1.77795e+07 1.37939e+07 0.00246565 1.80336e+07 50.3547 0.00761232 0.993675 0 50.0517 GTEX-ZE9C-2326-SM-5J1NT 1 C1 2 pieces, ~5% interstitial fat, delineated 6.6 Muscle Muscle - Skeletal 0011907 675 1283 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4816 03/22/2014 TruSeq.v1 RNASEQ 0.989727 171313 0.980496 0.991718 0.861008 20593 1 76 0.00387143 133 0 7.7097e+07 0.0192835 1.18875e+06 7.77409e+07 4.04333e+06 20606 3.83678e+07 0 0.119488 0.991718 0.853877 7.7097e+07 0.00473204 1.66842e+07 6.82572e+06 1.68981e+07 160 1.69036e+07 1.57607e+07 0.00430087 1.68188e+07 49.8742 0.0152912 0.993708 0 50.3185 GTEX-ZE9C-2526-SM-5IJDR 0 C1 6 pieces, minimal dermal fat 6.4 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 678 1281 BP-45485 RNA Extraction from Paxgene-derived Lysate Plate Based 11/05/2013 LCSET-4814 03/04/2014 TruSeq.v1 RNASEQ 0.985338 203220 0.97444 0.987898 0.790897 22719 1 76 0.0023495 180 0 7.30483e+07 0.0253224 385326 7.39432e+07 9.58028e+06 22740 3.6336e+07 0 0.183543 0.987898 0.781325 7.30483e+07 0.00401423 1.59306e+07 8.51447e+06 1.59941e+07 166 1.60026e+07 1.24696e+07 0.00317971 1.61055e+07 50.1602 0.00521111 0.990457 0 50.0994 GTEX-ZE9C-2726-SM-57WB5 0 C1 6 pieces focal adherent fat delineated, minimal. Squamous epithelium is ~50 microns 7.3 Skin Skin - Sun Exposed (Lower leg) 0004264 682 1279 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415,LCSET-4788 01/11/2014 TruSeq.v1 RNASEQ 0.990763 1.05174e+06 0.977681 0.993133 0.839473 25114 1 76 0.00222657 535 0 1.45862e+08 0.0219996 1.39051e+06 1.4687e+08 2.59308e+07 25155 7.25006e+07 0 0.138208 0.993133 0.833709 1.45862e+08 0.00400252 3.18539e+07 1.888e+07 3.20482e+07 443 3.20027e+07 2.63967e+07 0.00311243 3.22379e+07 50.183 0.00946765 0.995504 0 50.1521 GTEX-ZE9C-2826-SM-5S2MO 0 C1 2 pieces, ~10-20% fibrous bands/fascia 7.3 Adipose Tissue Adipose - Subcutaneous 0002190 685 1276 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990836 126623 0.977406 0.992841 0.800621 21403 1 76 0.00212203 149 0 6.42616e+07 0.0222928 1.26241e+06 6.4725e+07 4.57526e+06 21420 3.19511e+07 0 0.176785 0.992841 0.794889 6.42616e+07 0.00305222 1.42299e+07 7.1627e+06 1.43451e+07 171 1.42676e+07 8.72665e+06 0.00258618 1.443e+07 50.2829 0.0195043 0.994846 0 50.2017 GTEX-ZE9C-3026-SM-4WKHB 2 C1 4 pieces 8.1 Brain Brain - Cortex 0001870 689 1273 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990543 277757 0.963085 0.992867 0.830625 22557 1 76 0.0021656 129 0 5.56337e+07 0.0366038 2.78153e+06 5.60334e+07 4.50073e+06 22567 2.76799e+07 0 0.13246 0.992867 0.8247 5.56337e+07 0.00300381 1.22004e+07 9.0851e+06 1.23621e+07 155 1.23174e+07 6.32399e+06 0.00258373 1.23673e+07 50.1011 0.0496406 0.995191 0 50.3292 GTEX-ZE9C-3126-SM-4WKHN 2 C1 1 piece, ~50% adenohypophysis (delineated), 50% neurohypophysis; discontinuous adherent rim of fibrous tissue, ~1mm 6.3 Pituitary Pituitary 0000007 691 1272 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987572 359751 0.959967 0.990108 0.740568 24748 1 76 0.00224829 144 0 6.71685e+07 0.0398157 940574 6.78396e+07 5.47884e+06 24784 3.33702e+07 0 0.219399 0.990108 0.733242 6.71685e+07 0.0033654 1.46272e+07 8.55214e+06 1.47099e+07 157 1.47041e+07 9.06492e+06 0.00280541 1.48032e+07 50.1679 0.0138647 0.992644 0 50.141 GTEX-ZE9C-3126-SM-EZ6XV 2 C1 1 piece, ~50% adenohypophysis (delineated), 50% neurohypophysis; discontinuous adherent rim of fibrous tissue, ~1mm Pituitary Pituitary 0000007 691 1272 BP-53665 DNA Extraction from Paxgene-derived Lysate Plate Based 06/09/2014 LCSET-11114 06/09/2017 Standard Exome Sequencing v5 (ICE) WES GTEX-ZEX8-0001-SM-4YUX4 B1 Blood Whole Blood 0013756 -57 BP-36161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/15/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZEX8-0001-SM-53UBO B1 Blood Whole Blood 0013756 -57 BP-36161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/15/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZEX8-0001-SM-6UH17 B1 Blood Whole Blood 0013756 -57 BP-36161 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/15/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZEX8-0004-SM-4WKFQ B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -57 BP-39146 RNA isolation_Trizol Manual (Cell Pellet) 05/20/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991641 691202 0.972476 0.993407 0.842664 20572 1 76 0.00196678 185 0 8.61879e+07 0.0269445 654821 8.67599e+07 6.64419e+06 20595 4.28936e+07 0 0.129811 0.993407 0.837109 8.61879e+07 0.00262217 1.92882e+07 1.4508e+07 1.93087e+07 187 1.93495e+07 2.17376e+07 0.0022939 1.94076e+07 50.075 0.00754751 0.995173 0 50.0265 GTEX-ZEX8-0005-SM-4WKGE B1 8 Blood Whole Blood 0013756 -57 BP-36173 RNA isolation_PAXgene Blood RNA (Manual) 02/15/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.986921 1.36319e+06 0.948397 0.989131 0.800984 20035 1 76 0.0023191 161 0 9.59816e+07 0.0509141 477368 9.70363e+07 7.69304e+06 20049 4.77004e+07 0 0.147412 0.989131 0.792279 9.59816e+07 0.00352781 2.09265e+07 8.86114e+07 2.12277e+07 177 2.12138e+07 2.09671e+07 0.0029221 2.12007e+07 49.9845 0.00491948 0.991341 0 50.3573 GTEX-ZEX8-0008-SM-4E3JU B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 195 BP-37538 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.989748 1.23267e+06 0.95071 0.99273 0.831235 20986 1 76 0.00230379 180 0 8.92662e+07 0.0489794 425754 8.99199e+07 1.03757e+07 21000 4.43868e+07 0 0.119475 0.99273 0.825192 8.92662e+07 0.00326307 1.92737e+07 3.9012e+07 1.95224e+07 185 1.96339e+07 2.18604e+07 0.00278199 1.9439e+07 49.7505 0.00473481 0.995712 0 50.3205 GTEX-ZEX8-0326-SM-4WKGS 0 B1 2 pieces; 1 with 20% epicardial fat. Other with <10% fat. 6.5 Heart Heart - Atrial Appendage 0006631 73 1000 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4170 10/28/2013 TruSeq.v1 EXCLUDE 0.992883 230069 0.978572 0.994562 0.850258 21665 1 76 0.00171251 197 0 7.68469e+07 0.0211264 1.42984e+06 7.7267e+07 5.88526e+06 21685 3.82827e+07 0 0.128314 0.994562 0.845635 7.68469e+07 0.00234402 1.64911e+07 1.24791e+07 1.67445e+07 253 1.65626e+07 1.27391e+07 0.00202773 1.67941e+07 50.3469 0.0185052 0.996242 0 50.3813 GTEX-ZEX8-0326-SM-DO92C 0 B1 2 pieces; 1 with 20% epicardial fat. Other with <10% fat. 6.5 Heart Heart - Atrial Appendage 0006631 73 1000 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994724 662236 0.97766 0.995385 0.844716 23441 1 76 0.00162694 373 0 1.23386e+08 0.0220061 2.41719e+06 1.23958e+08 6.99966e+06 23467 6.15169e+07 0 0.132944 0.995385 0.840817 1.23386e+08 0.0018957 2.64959e+07 2.01877e+07 2.67764e+07 331 2.67258e+07 2.189e+07 0.00176123 2.66221e+07 49.9028 0.0195002 0.996046 0 50.2632 GTEX-ZEX8-0426-SM-4WWEN 1 B1 2 pieces. Hypertrophic fibers. 7 Heart Heart - Left Ventricle 0006566 74 999 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.989788 330192 0.983516 0.992207 0.857634 21321 1 76 0.00230845 267 0 9.17341e+07 0.0162113 1.64788e+06 9.24546e+07 1.25369e+07 21341 4.56322e+07 0 0.125882 0.992207 0.850951 9.17341e+07 0.00374613 2.03336e+07 1.85721e+07 1.99421e+07 278 1.98979e+07 1.53455e+07 0.00302553 2.05786e+07 50.8409 0.0178237 0.994626 0 49.5141 GTEX-ZEX8-0426-SM-DO92Y 1 B1 2 pieces. Hypertrophic fibers. 7 Heart Heart - Left Ventricle 0006566 74 999 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994366 727096 0.985898 0.995158 0.85907 21660 1 76 0.00156591 371 0 1.16362e+08 0.0138252 2.16731e+06 1.16928e+08 6.43869e+06 21679 5.79915e+07 0 0.126828 0.995158 0.854911 1.16362e+08 0.00183992 2.55054e+07 2.42122e+07 2.57094e+07 336 2.56441e+07 2.02191e+07 0.00170281 2.56414e+07 49.9974 0.0185354 0.995951 0 50.1991 GTEX-ZEX8-0526-SM-4WKH5 1 B1 2 pieces. Bronchial purulent exudates and adjacent pneumonia, <5% area. Heart failure cells. Partial pleural surface on one piece (please sample BELOW pleura). 7.8 Lung Lung 0008952 76 997 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4170 10/28/2013 TruSeq.v1 EXCLUDE 0.989162 283637 0.975422 0.992142 0.807983 24087 1 76 0.00209782 164 0 7.47078e+07 0.0242214 299022 7.52995e+07 6.25909e+06 24117 3.71483e+07 0 0.167439 0.992142 0.801634 7.47078e+07 0.0028232 1.66297e+07 6.66932e+06 1.67533e+07 176 1.67954e+07 1.38499e+07 0.00245942 1.68025e+07 50.0106 0.0039711 0.995122 0 50.1852 GTEX-ZEX8-0526-SM-DO115 1 B1 2 pieces. Bronchial purulent exudates and adjacent pneumonia, <5% area. Heart failure cells. Partial pleural surface on one piece (please sample BELOW pleura). 7.8 Lung Lung 0008952 76 997 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987947 420882 0.975983 0.991896 0.809845 25473 1 76 0.00235764 278 0 1.06678e+08 0.023632 417192 1.0755e+08 1.07559e+07 25517 5.29978e+07 0 0.166138 0.991896 0.803282 1.06678e+08 0.0045305 2.37045e+07 9.28531e+06 2.39048e+07 282 2.40768e+07 2.03821e+07 0.00343975 2.39216e+07 49.8383 0.00387905 0.995845 0 50.2104 GTEX-ZEX8-0626-SM-DO118 0 B1 2 pieces.Medullary hyperplasia: abundant (80%) medulla especially in one piece; could account for patient's hypertension. 8.3 Adrenal Gland Adrenal Gland 0002369 79 994 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.989118 488071 0.979069 0.992823 0.833264 23747 1 76 0.00212318 275 0 1.25609e+08 0.0205836 1.83825e+06 1.26517e+08 1.31494e+07 23783 6.24319e+07 0 0.145805 0.992823 0.827284 1.25609e+08 0.00385616 2.76481e+07 1.51794e+07 2.78059e+07 308 2.79934e+07 2.20491e+07 0.00298644 2.78603e+07 49.8809 0.0145297 0.996528 0 50.1423 GTEX-ZEX8-0726-SM-4WKH8 1 B1 2 pieces 7.8 Spleen Spleen 0002106 82 991 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170,LCSET-4523 11/21/2013 TruSeq.v1 RNASEQ 0.990801 463421 0.965901 0.992192 0.780535 25169 1 76 0.00912295 164 0 1.04257e+08 0.0325264 453519 1.05077e+08 2.39079e+07 25214 5.18064e+07 0 0.185367 0.992192 0.77444 1.04257e+08 0.00331069 2.30943e+07 1.90105e+07 2.3147e+07 180 2.31546e+07 1.78964e+07 0.00622089 2.32452e+07 50.0976 0.00431605 0.993583 0 50.057 GTEX-ZEX8-0826-SM-4WKHK 1 B1 2 pieces. 10% macrovesicular steatosis. 7.8 Liver Liver 0001114 85 988 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990609 227791 0.980267 0.993489 0.848528 19954 1 76 0.00185083 110 0 5.87158e+07 0.0190349 361551 5.91006e+07 4.63075e+06 19964 2.91939e+07 0 0.131739 0.993489 0.843003 5.87158e+07 0.00252076 1.27238e+07 7.59409e+06 1.2781e+07 132 1.28126e+07 1.25428e+07 0.00218483 1.28493e+07 50.0715 0.00611755 0.996368 0 50.1121 GTEX-ZEX8-1026-SM-4WKHE 1 B1 2 pieces: 1 has 20% fat; other well trimmed. 7.7 Pancreas Pancreas 0001150 100 973 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989857 237329 0.982552 0.992474 0.862428 20891 1 76 0.00211047 95 0 8.11408e+07 0.0172168 152381 8.17561e+07 6.85754e+06 20905 4.03726e+07 0 0.120124 0.992474 0.855937 8.11408e+07 0.00286599 1.8747e+07 3.01132e+07 1.90631e+07 120 1.89931e+07 2.62312e+07 0.00248723 1.90245e+07 50.0413 0.00186385 0.995091 0 50.418 GTEX-ZEX8-1226-SM-5S2OK 1 B1 2 pieces. Large specimens with central holes. 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 106 967 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993674 198356 0.978025 0.995053 0.839516 21416 1 76 0.00162708 131 0 5.898e+07 0.0216375 447993 5.92732e+07 3.62e+06 21429 2.93714e+07 0 0.13851 0.995053 0.835363 5.898e+07 0.00237122 1.30027e+07 5.15998e+06 1.31426e+07 152 1.30779e+07 1.03863e+07 0.00199864 1.31462e+07 50.1302 0.0075581 0.996433 0 50.2677 GTEX-ZEX8-1326-SM-4WWEW 1 B1 6 pieces. Well trimmed muscularis. 8.5 Esophagus Esophagus - Muscularis 0004648 117 956 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986935 385819 0.974044 0.989914 0.849426 22986 1 76 0.00247347 278 0 1.01453e+08 0.0256564 754548 1.02486e+08 1.44347e+07 23005 5.04291e+07 0 0.124618 0.989914 0.840858 1.01453e+08 0.00380486 2.15997e+07 1.16128e+07 2.16618e+07 287 2.16662e+07 1.92484e+07 0.00313716 2.18788e+07 50.244 0.00736243 0.992893 0 50.0718 GTEX-ZEX8-1426-SM-4WKHQ 1 B1 6 pieces. Focal surface sloughing. Mild chronic inflammation and squamous hyperplasia. 9.4 Esophagus Esophagus - Mucosa 0006920 118 955 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991325 432794 0.9768 0.992834 0.809525 24253 1 76 0.00200312 285 0 1.11435e+08 0.0228842 421168 1.1224e+08 8.22896e+06 24282 5.54958e+07 0 0.167275 0.992834 0.803724 1.11435e+08 0.00265991 2.51422e+07 1.52952e+07 2.51541e+07 305 2.51655e+07 2.22206e+07 0.00233102 2.52981e+07 50.1313 0.0037524 0.994342 0 50.0117 GTEX-ZEX8-1526-SM-4WWBE 1 B1 6 pieces. well trimmed muscularis. 7.4 Esophagus Esophagus - Gastroesophageal Junction 0004550 122 951 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991462 435588 0.968678 0.993669 0.803876 23854 1 76 0.00241681 211 0 9.18469e+07 0.0310719 698696 9.24321e+07 7.40158e+06 23884 4.57135e+07 0 0.164802 0.993669 0.798786 9.18469e+07 0.0030098 1.98255e+07 1.13205e+07 1.99637e+07 236 1.99114e+07 1.57759e+07 0.00271265 2.00718e+07 50.2007 0.00755902 0.995875 0 50.1737 GTEX-ZEX8-1626-SM-4WKG7 3 B1 6 pieces. Severe surface autolysis; some preservation of deep glands. 6.1 Stomach Stomach 0000945 125 948 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.97673 235587 0.985418 0.978395 0.89983 20601 1 76 0.00186934 318 0 6.75857e+07 0.0136893 520352 6.90782e+07 5.36857e+06 20609 3.35765e+07 0 0.0855876 0.978395 0.880389 6.75857e+07 0.00279446 1.59259e+07 1.04198e+08 1.60545e+07 211 1.60378e+07 2.17674e+07 0.00233111 1.60596e+07 50.0339 0.0075328 0.980059 0 50.201 GTEX-ZEX8-1826-SM-57WBH 1 B1 6 pieces. Rich lymphoid tissue in all pieces; 2 pieces have muscularis. 7.2 Small Intestine Small Intestine - Terminal Ileum 0001211 151 922 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.990267 286679 0.96564 0.992219 0.749863 25047 1 76 0.00214384 162 0 7.95056e+07 0.0337882 536234 8.01291e+07 8.71324e+06 25082 3.95717e+07 0 0.215777 0.992219 0.744028 7.95056e+07 0.00358171 1.75926e+07 1.03465e+07 1.75569e+07 198 1.75448e+07 1.11249e+07 0.00286136 1.77422e+07 50.2798 0.00669212 0.99417 0 49.9492 GTEX-ZEX8-1926-SM-4WKFR 1 B1 6 pieces: 4 have full thickness (target); 2 have only mucosa 7 Colon Colon - Transverse 0001157 156 917 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987705 420484 0.971821 0.990526 0.803927 24632 1 76 0.00228582 377 0 1.01115e+08 0.0268044 1.11263e+06 1.02082e+08 8.27349e+06 24675 5.01629e+07 0 0.167894 0.990526 0.79631 1.01115e+08 0.00347697 2.23596e+07 1.53736e+07 2.26543e+07 333 2.26432e+07 1.51853e+07 0.0028797 2.26376e+07 49.9937 0.0108993 0.993347 0 50.3274 GTEX-ZEX8-2026-SM-4WKF3 1 B1 6 pieces. Prostate not colon 6.4 Prostate Prostate 0002367 166 907 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991571 434300 0.973222 0.993499 0.801772 23808 1 76 0.00191564 151 0 7.23865e+07 0.0265105 275675 7.28602e+07 5.5991e+06 23829 3.59871e+07 0 0.17145 0.993499 0.796559 7.23865e+07 0.00290074 1.57932e+07 6.32243e+06 1.59494e+07 168 1.5897e+07 1.28311e+07 0.00240724 1.59844e+07 50.137 0.00378362 0.995427 0 50.246 GTEX-ZEX8-2226-SM-57WC6 1 B1 2 pieces. Overly large pieces of fibroadipose tissue with central defects (holes). 6.6 Breast Breast - Mammary Tissue 0008367 176 897 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4415 12/21/2013 TruSeq.v1 RNASEQ 0.989003 213159 0.969105 0.992144 0.770561 23728 1 76 0.00189753 125 0 5.81493e+07 0.0306467 260662 5.86098e+07 7.38503e+06 23759 2.89169e+07 0 0.198544 0.992144 0.764507 5.81493e+07 0.00403528 1.27159e+07 6.30606e+06 1.28497e+07 135 1.28718e+07 9.20163e+06 0.00296302 1.28613e+07 49.9796 0.00444742 0.995285 0 50.2615 GTEX-ZEX8-2326-SM-5S2MN 1 B1 3 pieces. 5.8 Adipose Tissue Adipose - Subcutaneous 0002190 195 878 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.992895 197473 0.973362 0.994302 0.78224 22606 1 76 0.00174556 148 0 6.64179e+07 0.0263295 214787 6.67985e+07 4.27569e+06 22636 3.30627e+07 0 0.191122 0.994302 0.777783 6.64179e+07 0.00257803 1.45663e+07 5.40089e+06 1.46661e+07 157 1.46076e+07 1.12543e+07 0.00216121 1.47175e+07 50.1873 0.00321545 0.995708 0 50.1708 GTEX-ZEX8-2426-SM-4WKG4 1 B1 6 pieces. Well trimmed. 5.7 Skin Skin - Sun Exposed (Lower leg) 0004264 195 878 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988608 367400 0.96794 0.991722 0.762558 24904 1 76 0.00204736 230 0 8.96943e+07 0.0318546 429599 9.0443e+07 7.3199e+06 24946 4.45709e+07 0 0.205382 0.991722 0.756245 8.96943e+07 0.00292708 1.94665e+07 9.43495e+06 1.96449e+07 227 1.96628e+07 1.31913e+07 0.00248584 1.97217e+07 50.0747 0.00474994 0.994836 0 50.2281 GTEX-ZEX8-2526-SM-DO92M 1 B1 2 pieces. 1 has large central fibroadipose component about 60%; other <10% fat. 7.1 Muscle Muscle - Skeletal 0011907 198 875 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994838 729272 0.983876 0.995665 0.866523 21441 1 76 0.00153616 382 0 1.19221e+08 0.0159105 1.16535e+06 1.1974e+08 6.59351e+06 21454 5.9435e+07 0 0.117354 0.995665 0.862766 1.19221e+08 0.0019624 2.6071e+07 1.90384e+07 2.64917e+07 343 2.64617e+07 2.26203e+07 0.0017491 2.61949e+07 49.7467 0.00973228 0.996491 0 50.4002 GTEX-ZEX8-2626-SM-DO92R 1 B1 4 pieces. Large fibrotic plaques narrow up to 60% of lumen. 6.9 Blood Vessel Artery - Tibial 0007610 208 865 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994 639581 0.974719 0.994879 0.822184 21299 1 76 0.0018744 168 0 8.21694e+07 0.0248725 334119 8.25924e+07 5.01408e+06 21320 4.09292e+07 0 0.152535 0.994879 0.817974 8.21694e+07 0.00264616 1.76722e+07 5.61279e+06 1.7785e+07 193 1.77768e+07 1.58056e+07 0.00225994 1.77482e+07 49.9597 0.0040454 0.995758 0 50.1591 GTEX-ZF28-0002-SM-4YUW3 C1 Blood Whole Blood 0013756 366 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZF28-0002-SM-53UC2 C1 Blood Whole Blood 0013756 366 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZF28-0002-SM-6UH3K C1 Blood Whole Blood 0013756 366 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZF28-0005-SM-4WKH3 C1 8 Blood Whole Blood 0013756 366 BP-36200 RNA isolation_PAXgene Blood RNA (Manual) 02/19/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.970217 677766 0.967119 0.972935 0.773303 18651 1 76 0.00236259 114 0 8.37109e+07 0.0314775 266619 8.60396e+07 7.14319e+06 18658 4.15554e+07 0 0.193816 0.972935 0.752373 8.37109e+07 0.00366753 1.91199e+07 1.22581e+08 1.92773e+07 136 1.92937e+07 1.98062e+07 0.00301324 1.93586e+07 50.0839 0.00309879 0.975653 0 50.2049 GTEX-ZF28-0008-SM-4E3K3 C1 10 Skin Cells - Cultured fibroblasts EFO_0002009 464 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990195 645189 0.973468 0.993093 0.878808 19704 1 76 0.00224559 213 0 8.86061e+07 0.0263337 208992 8.92224e+07 1.03869e+07 19714 4.40772e+07 0 0.0946595 0.993093 0.872738 8.86061e+07 0.00339658 1.96562e+07 1.75039e+07 1.98458e+07 214 1.9899e+07 2.11834e+07 0.00281941 1.98579e+07 49.9483 0.00234237 0.995991 0 50.24 GTEX-ZF28-0011-R10a-SM-4WWEH C1, A1 8.1 Brain Brain - Frontal Cortex (BA9) 0009834 375 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984868 920027 0.952162 0.988674 0.821719 24418 1 76 0.00260151 269 0 9.59884e+07 0.0473469 4.19129e+06 9.7088e+07 1.39126e+07 24441 4.76606e+07 0 0.130443 0.988674 0.812412 9.59884e+07 0.00415546 2.07768e+07 2.85729e+07 2.08737e+07 304 2.08803e+07 1.20625e+07 0.00337549 2.11103e+07 50.2738 0.04317 0.992481 0 50.1163 GTEX-ZF28-0011-R10a-SM-AHZMI C1, A1 Brain Brain - Frontal Cortex (BA9) 0009834 375 ChIP-Seq GTEX-ZF28-0011-R11a-SM-4WWEI C1, A1 6.3 Brain Brain - Cerebellar Hemisphere 0002037 375 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984008 459100 0.952411 0.986669 0.797949 22139 1 76 0.0027198 265 0 8.25238e+07 0.0474121 6.5676e+06 8.36388e+07 1.08813e+07 22155 4.10264e+07 0 0.154462 0.986669 0.787311 8.25238e+07 0.00427318 1.79684e+07 2.61300e+07 1.77994e+07 307 1.76729e+07 4.67102e+06 0.00349439 1.82921e+07 50.8609 0.0785233 0.989329 0 49.7637 GTEX-ZF28-0011-R1a-SM-4WWD1 C1, A1 6.1 Brain Brain - Hippocampus 0001954 375 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989817 656471 0.956005 0.992551 0.842122 20894 1 76 0.00254044 265 0 6.94331e+07 0.0438855 1.03242e+07 6.99542e+07 5.72839e+06 20902 3.45359e+07 0 0.113883 0.992551 0.83585 6.94331e+07 0.00322055 1.50665e+07 2.9291e+07 1.53994e+07 275 1.50548e+07 3.59216e+06 0.00287956 1.56204e+07 50.9219 0.147585 0.995285 0 50.5464 GTEX-ZF28-0011-R3a-SM-4WWDA C1, A1 7.3 Brain Brain - Anterior cingulate cortex (BA24) 0009835 375 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990743 705631 0.961042 0.993274 0.832052 23008 1 76 0.00247687 367 0 8.3147e+07 0.0387736 8.54418e+06 8.371e+07 6.53753e+06 23022 4.13531e+07 0 0.12899 0.993274 0.826456 8.3147e+07 0.00317048 1.80092e+07 2.69369e+07 1.83548e+07 347 1.80414e+07 6.12686e+06 0.00282279 1.85334e+07 50.6726 0.102069 0.995806 0 50.4752 GTEX-ZF28-0011-R5a-SM-4WWCZ C1, A1 7.5 Brain Brain - Caudate (basal ganglia) 0001873 375 BP-41299 RNA isolation_PAXgene Tissue miRNA 07/24/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989725 784048 0.95521 0.992419 0.830539 22957 1 76 0.00254056 369 0 8.27503e+07 0.0446177 8.43694e+06 8.33824e+07 6.62685e+06 22970 4.11521e+07 0 0.124671 0.992419 0.824243 8.27503e+07 0.00326989 1.78947e+07 2.82764e+07 1.82295e+07 341 1.79551e+07 6.6936e+06 0.00290424 1.84032e+07 50.6163 0.101184 0.995113 0 50.4635 GTEX-ZF28-0011-R6a-SM-4WKHI C1, A1 6.7 Brain Brain - Nucleus accumbens (basal ganglia) 0001882 375 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990133 496327 0.966047 0.992377 0.841058 23541 1 76 0.00203308 370 0 8.22305e+07 0.0337709 9.32234e+06 8.28622e+07 6.56711e+06 23563 4.08927e+07 0 0.124989 0.992377 0.834646 8.22305e+07 0.00294819 1.81194e+07 2.02027e+07 1.85389e+07 353 1.83448e+07 6.8661e+06 0.0024896 1.8494e+07 50.2026 0.112504 0.99462 0 50.5722 GTEX-ZF28-0011-R7a-SM-4WKF5 C1, A1 6.3 Brain Brain - Putamen (basal ganglia) 0001874 375 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990041 487796 0.969005 0.992899 0.851602 21468 1 76 0.00202163 367 0 7.96806e+07 0.0308883 1.14471e+07 8.02504e+07 6.44755e+06 21479 3.96168e+07 0 0.117403 0.992899 0.845555 7.96806e+07 0.00303038 1.73151e+07 2.56006e+07 1.79603e+07 360 1.75732e+07 4.85074e+06 0.00252455 1.78964e+07 50.4555 0.142642 0.995758 0 50.9146 GTEX-ZF28-0011-R8a-SM-4WWFW C1, A1 6.2 Brain Brain - Hypothalamus 0001898 375 BP-41239 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.981692 1.9406e+06 0.905587 0.984545 0.769795 23162 1 76 0.00267863 265 0 8.22685e+07 0.09414 9.86025e+06 8.356e+07 1.1043e+07 23178 4.08896e+07 0 0.135792 0.984545 0.757898 8.22685e+07 0.0043498 1.70386e+07 8.06224e+07 1.72126e+07 310 1.69888e+07 5.07922e+06 0.00351179 1.75149e+07 50.7624 0.118002 0.987398 0 50.254 GTEX-ZF28-0011-R9a-SM-4WWDY C1, A1 7.3 Brain Brain - Spinal cord (cervical c-1) 0006469 375 BP-41252 RNA isolation_PAXgene Tissue miRNA 07/23/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.98627 676732 0.954956 0.989838 0.804541 23663 1 76 0.00270761 394 0 1.01225e+08 0.0447248 6.61250e+06 1.02264e+08 1.31418e+07 23693 5.0272e+07 0 0.150415 0.989838 0.796365 1.01225e+08 0.00429874 2.23122e+07 2.20171e+07 2.26949e+07 334 2.24882e+07 1.28426e+07 0.00350031 2.28659e+07 50.4163 0.0646609 0.993407 0 50.4251 GTEX-ZF28-0126-SM-4WKGK 2 C1 6 pieces. well trimmed 5.8 Skin Skin - Sun Exposed (Lower leg) 0004264 463 613 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989909 411814 0.971532 0.991763 0.763965 24065 1 76 0.00206631 175 0 7.69982e+07 0.0282653 474567 7.76377e+07 5.78119e+06 24099 3.83018e+07 0 0.207566 0.991763 0.757672 7.69982e+07 0.0029341 1.6936e+07 7.76047e+06 1.70831e+07 191 1.70378e+07 1.09184e+07 0.0024994 1.71271e+07 50.1307 0.00611258 0.993616 0 50.2163 GTEX-ZF28-0226-SM-5S2OE 2 C1 2 pieces. 10% fibrous tissue admixed 5.9 Adipose Tissue Adipose - Subcutaneous 0002190 465 612 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.988176 192256 0.970799 0.990372 0.813355 21531 1 76 0.00177227 148 0 6.49049e+07 0.0288614 448560 6.55359e+07 4.515e+06 21553 3.22754e+07 0 0.157444 0.990372 0.805524 6.49049e+07 0.00269075 1.41363e+07 9.29533e+06 1.43496e+07 162 1.42976e+07 1.1288e+07 0.00223049 1.43335e+07 50.0628 0.00684449 0.992568 0 50.3744 GTEX-ZF28-0526-SM-4WKGW 2 C1 2 pieces. Moderate atrophy. 40 and 10% internal fat 8.3 Muscle Muscle - Skeletal 0011907 486 592 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991124 364403 0.980704 0.993653 0.868491 21835 1 76 0.00176126 281 0 1.00338e+08 0.0190043 872717 1.00979e+08 7.89188e+06 21852 4.99391e+07 0 0.112213 0.993653 0.862978 1.00338e+08 0.00237298 2.16589e+07 1.19624e+07 2.17873e+07 295 2.17981e+07 2.09141e+07 0.00206634 2.18802e+07 50.094 0.00864254 0.996183 0 50.1478 GTEX-ZF28-0726-SM-4WKFU 2 C1 2 pieces. Emphysema and patchy fibrosis 6.4 Lung Lung 0008952 521 558 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990057 500067 0.971503 0.992011 0.766376 25466 1 76 0.00230425 376 0 1.13371e+08 0.0279453 623241 1.14284e+08 8.58658e+06 25507 5.63526e+07 0 0.205127 0.992011 0.760254 1.13371e+08 0.003248 2.49807e+07 1.39849e+07 2.50745e+07 342 2.50679e+07 1.84208e+07 0.0027752 2.52072e+07 50.1386 0.00545344 0.993966 0 50.0937 GTEX-ZF28-0726-SM-CYKR3 2 C1 2 pieces. Emphysema and patchy fibrosis 6.4 Lung Lung 0008952 521 558 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 RIP-Seq GTEX-ZF28-0826-SM-4WKGJ 2 C1 2 pieces. 1 mm adenomatoid nodule (marked) 7.8 Thyroid Thyroid 0002046 523 557 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989818 308349 0.965995 0.991867 0.766224 23780 1 76 0.0021169 137 0 6.5221e+07 0.0337269 684212 6.57558e+07 4.85164e+06 23803 3.24365e+07 0 0.199771 0.991867 0.759992 6.5221e+07 0.00314688 1.43145e+07 7.21622e+06 1.43278e+07 149 1.43488e+07 1.06387e+07 0.00263082 1.44299e+07 50.1409 0.0104054 0.993915 0 50.0234 GTEX-ZF28-1026-SM-4WKGV 1 C1 6 pieces. Flat fibrous plaque up to 1 mm thick on 3 pieces. Welll trimmed. 6.4 Blood Vessel Artery - Aorta 0001496 527 555 BP-42528 RNA Extraction from Paxgene-derived Lysate Plate Based 08/21/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.985001 359410 0.97533 0.988307 0.814155 21718 1 76 0.00213989 165 0 7.40416e+07 0.0243163 264073 7.49176e+07 6.14352e+06 21733 3.67503e+07 0 0.161175 0.988307 0.804635 7.40416e+07 0.00328019 1.61055e+07 1.17697e+07 1.61652e+07 180 1.61928e+07 1.30663e+07 0.00270813 1.63199e+07 50.1954 0.00352484 0.991613 0 50.0925 GTEX-ZF28-1426-SM-5S2OG 1 C1 2 pieces. 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 535 549 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990557 252146 0.973019 0.992897 0.787697 22798 1 76 0.0018296 154 0 7.10626e+07 0.0267017 864710 7.1571e+07 4.9308e+06 22820 3.53259e+07 0 0.185322 0.992897 0.782102 7.10626e+07 0.00269622 1.56085e+07 9.50113e+06 1.57632e+07 170 1.57297e+07 1.19315e+07 0.00226189 1.58087e+07 50.1252 0.0120818 0.995236 0 50.2466 GTEX-ZF28-2526-SM-57WFH 1 C1 6 pieces. well dissected muscularis 5.8 Colon Colon - Sigmoid 0001159 562 530 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988112 374807 0.969272 0.991038 0.81602 22009 1 76 0.00246167 143 0 6.43865e+07 0.030495 839879 6.49688e+07 8.8699e+06 22028 3.19778e+07 0 0.153253 0.991038 0.808706 6.43865e+07 0.00437722 1.38068e+07 8.14956e+06 1.39207e+07 153 1.3908e+07 1.07666e+07 0.00341662 1.40008e+07 50.1663 0.0129274 0.993963 0 50.2053 GTEX-ZF28-2926-SM-4WKG1 1 C1 4 pieces 6.1 Brain Brain - Cerebellum 0002037 595 499 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988477 669938 0.938905 0.99137 0.764116 23590 1 76 0.00213195 266 0 8.92085e+07 0.0608689 4.14451e+06 8.99851e+07 7.37454e+06 23612 4.43345e+07 0 0.174789 0.99137 0.757521 8.92085e+07 0.00306492 1.89854e+07 3.00559e+07 1.94055e+07 326 1.93568e+07 7.31042e+06 0.00259707 1.92816e+07 49.9027 0.0460577 0.994262 0 50.5471 GTEX-ZF28-3026-SM-4WKHP 1 C1 4 pieces 6.1 Brain Brain - Cortex 0001870 596 499 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.992134 501490 0.963316 0.993854 0.842669 23087 1 76 0.00196127 369 0 8.36015e+07 0.0363793 5.77923e+06 8.41185e+07 6.33839e+06 23103 4.16114e+07 0 0.120647 0.993854 0.83749 8.36015e+07 0.00278879 1.82176e+07 2.0631e+07 1.86428e+07 331 1.84591e+07 8.94437e+06 0.00237431 1.85371e+07 50.1054 0.0687034 0.995574 0 50.5767 GTEX-ZF28-3126-SM-4WKFC 2 C1 1 piece 6.3 Pituitary Pituitary 0000007 597 499 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990613 464394 0.958918 0.992787 0.763366 25593 1 76 0.00207459 208 0 9.43601e+07 0.0408188 1.19913e+06 9.50456e+07 7.22539e+06 25639 4.69167e+07 0 0.195552 0.992787 0.75786 9.43601e+07 0.00305474 2.00716e+07 1.44007e+07 2.00618e+07 229 2.00771e+07 1.5337e+07 0.00256359 2.02605e+07 50.2273 0.0126164 0.994962 0 49.9877 GTEX-ZF29-0002-SM-4WKF2 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -132 BP-39937 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989415 1.53291e+06 0.956739 0.99174 0.763394 22460 1 76 0.00226588 284 0 1.16574e+08 0.0426379 1.2388e+06 1.17545e+08 9.2932e+06 22509 5.79633e+07 0 0.193344 0.99174 0.757088 1.16574e+08 0.00299823 2.55472e+07 2.64873e+07 2.56802e+07 283 2.57807e+07 2.50862e+07 0.00263119 2.57223e+07 49.9433 0.010539 0.994065 0 50.1298 GTEX-ZF29-0004-SM-4YUX5 B1 Blood Whole Blood 0013756 -132 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZF29-0004-SM-53UBU B1 Blood Whole Blood 0013756 -132 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZF29-0004-SM-6UH18 B1 Blood Whole Blood 0013756 -132 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZF29-0006-SM-4WKGQ B1 8.3 Blood Whole Blood 0013756 -132 BP-36200 RNA isolation_PAXgene Blood RNA (Manual) 02/19/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.984816 1.15134e+06 0.9545 0.987599 0.781492 20160 1 76 0.00238352 269 0 1.19092e+08 0.044667 246659 1.20587e+08 1.00895e+07 20182 5.91736e+07 0 0.173008 0.987599 0.771801 1.19092e+08 0.00332669 2.59361e+07 9.23565e+07 2.6363e+07 296 2.63989e+07 2.40018e+07 0.00285378 2.62489e+07 49.8576 0.00204548 0.990383 0 50.4081 GTEX-ZF29-0126-SM-4WKGZ 0 B1 2 pieces, calcific atherosclerosis with narrowing of the lumen. 5% fat attached to one, second with ~40% fibroconnective tissue and nerve 6.1 Blood Vessel Artery - Coronary 0001621 93 955 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988627 225629 0.973398 0.991156 0.81506 22206 1 76 0.00254634 125 0 6.05527e+07 0.0250438 232453 6.10931e+07 4.62533e+06 22221 3.00684e+07 0 0.158338 0.991156 0.807852 6.05527e+07 0.0035098 1.31693e+07 6.30476e+06 1.32634e+07 143 1.32625e+07 1.05597e+07 0.00302684 1.33184e+07 50.1052 0.0038049 0.993684 0 50.1778 GTEX-ZF29-0226-SM-4WKHO 0 B1 2 pieces; appears to represent heart specimen, not atrial appendage. 7.7 Heart Heart - Left Ventricle 0006566 92 956 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.99179 235559 0.984525 0.993298 0.859406 20542 1 76 0.0023176 266 0 8.68039e+07 0.0152167 1.75821e+06 8.73896e+07 6.48094e+06 20554 4.32468e+07 0 0.12512 0.993298 0.853646 8.68039e+07 0.0029325 1.90359e+07 2.0346e+07 1.91602e+07 273 1.90755e+07 1.29768e+07 0.00262458 1.92419e+07 50.2171 0.0201192 0.994806 0 50.1628 GTEX-ZF29-0326-SM-4WKFB 0 B1 6 pieces, mild atherosclerosis 7.1 Blood Vessel Artery - Aorta 0001496 93 955 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991597 349446 0.975878 0.99357 0.831797 21951 1 76 0.00199748 203 0 8.40616e+07 0.0235524 174056 8.46055e+07 6.48926e+06 21971 4.18277e+07 0 0.144081 0.99357 0.826449 8.40616e+07 0.00274928 1.82288e+07 6.64745e+06 1.83499e+07 204 1.83489e+07 1.61215e+07 0.00237263 1.8398e+07 50.0669 0.00205726 0.995543 0 50.1656 GTEX-ZF29-0426-SM-4WKFN 0 B1 4 pieces; appears to represent atrial appendage specimen, not left ventricle. Increased interstitial fibrosis, largest piece is 20% fat. 7.9 Heart Heart - Atrial Appendage 0006631 94 954 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990349 333492 0.977654 0.993129 0.834561 21243 1 76 0.00225862 197 0 7.89007e+07 0.0220601 1.28029e+06 7.94466e+07 6.12492e+06 21262 3.92426e+07 0 0.143094 0.993129 0.828826 7.89007e+07 0.00310082 1.68374e+07 1.42012e+07 1.70634e+07 228 1.70123e+07 1.18819e+07 0.00267855 1.70793e+07 50.0983 0.0161151 0.995909 0 50.3333 GTEX-ZF29-0626-SM-4WKHD 0 B1 2 pieces, proliferation of small vascular channels (?hemangioma) and arterial thickening. Dr. Allen Burke and Dr. Sobin were consulted. 8.3 Spleen Spleen 0002106 101 947 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988198 375589 0.963093 0.990192 0.74412 25004 1 76 0.00285043 205 0 9.24497e+07 0.0349191 260513 9.33654e+07 7.47877e+06 25048 4.59164e+07 0 0.218973 0.990192 0.736822 9.24497e+07 0.00352156 2.03317e+07 1.32086e+07 2.04501e+07 217 2.05013e+07 1.41944e+07 0.00318532 2.04639e+07 49.9544 0.00279025 0.992186 0 50.1451 GTEX-ZF29-0726-SM-DO92H 0 B1 2 pieces, ~10% of smaller piece is fat and vessels 7.4 Thyroid Thyroid 0002046 103 945 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994723 507640 0.970411 0.995336 0.770677 24706 1 76 0.00214064 208 0 9.43211e+07 0.0290791 281609 9.47631e+07 5.75341e+06 24755 4.70102e+07 0 0.199734 0.995336 0.767083 9.43211e+07 0.00244126 2.07199e+07 8.42381e+06 2.08453e+07 238 2.0859e+07 1.67088e+07 0.00229086 2.07622e+07 49.8837 0.00297172 0.995949 0 50.1508 GTEX-ZF29-0826-SM-5S2NP 1 B1 3 pieces, virtually all fat with only peripheral rim of fibroconnective tissue, some central defects (poor fixation) in one piece. 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 105 943 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.993106 168158 0.974758 0.994276 0.822508 21690 1 76 0.00192906 143 0 6.20282e+07 0.0247505 350121 6.23853e+07 4.33216e+06 21711 3.08784e+07 0 0.15225 0.994276 0.8178 6.20282e+07 0.00278697 1.35946e+07 6.27851e+06 1.37643e+07 156 1.36882e+07 1.0306e+07 0.00235751 1.37422e+07 50.0985 0.00561224 0.995447 0 50.3101 GTEX-ZF29-0826-SM-5S2O2 1 B1 3 pieces, virtually all fat with only peripheral rim of fibroconnective tissue, some central defects (poor fixation) in one piece. 6.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 105 943 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.990534 252120 0.977264 0.993474 0.841276 21549 1 76 0.00181377 151 0 6.5995e+07 0.0223816 409108 6.64285e+07 4.47988e+06 21572 3.28002e+07 0 0.135988 0.993474 0.835786 6.5995e+07 0.00276836 1.44891e+07 5.88925e+06 1.46155e+07 168 1.45935e+07 1.133e+07 0.00228965 1.47007e+07 50.1831 0.00615862 0.996414 0 50.2172 GTEX-ZF29-0926-SM-4WKFZ 1 B1 6 pieces, each with ~5-10% internal and attached dermal fat 6.9 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 107 941 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991226 327609 0.966696 0.99341 0.809634 22728 1 76 0.00203118 190 0 8.00809e+07 0.0331052 766526 8.06121e+07 6.42337e+06 22748 3.98395e+07 0 0.157062 0.99341 0.804298 8.00809e+07 0.00275337 1.74219e+07 1.48137e+07 1.75566e+07 200 1.75398e+07 1.3814e+07 0.00239148 1.76179e+07 50.1111 0.00950882 0.995594 0 50.1925 GTEX-ZF29-1026-SM-4WKGC 0 B1 2 pieces, focal collections of chronic inflammatory cells and areas of collapse 8.5 Lung Lung 0008952 117 931 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991657 270115 0.975271 0.993511 0.818848 22851 1 76 0.00214924 138 0 6.53146e+07 0.024258 165864 6.57412e+07 5.20557e+06 22873 3.25092e+07 0 0.156422 0.993511 0.813534 6.53146e+07 0.00287207 1.44908e+07 5.42551e+06 1.45794e+07 153 1.45888e+07 1.20932e+07 0.00250998 1.45998e+07 50.0188 0.00252299 0.995365 0 50.1525 GTEX-ZF29-1126-SM-4WKGO 2 B1 2 pieces, one about 30% fat, increased interstitial fibrosis 7 Pancreas Pancreas 0001150 120 928 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990307 442258 0.979452 0.993089 0.867316 20980 1 76 0.00193556 109 0 7.51573e+07 0.0201575 146243 7.56803e+07 5.97528e+06 20993 3.73515e+07 0 0.112136 0.993089 0.861322 7.51573e+07 0.00308035 1.72767e+07 1.9799e+07 1.74721e+07 115 1.74461e+07 2.36575e+07 0.00250635 1.75191e+07 50.1045 0.00193238 0.995871 0 50.2812 GTEX-ZF29-1226-SM-4WKH1 0 B1 6 pieces, well-trimmed of mucosa 8.1 Esophagus Esophagus - Muscularis 0004648 124 924 BP-42662 RNA Extraction from Paxgene-derived Lysate Plate Based 08/23/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991081 271028 0.976345 0.993619 0.845617 21078 1 76 0.00201413 165 0 6.88403e+07 0.0233825 472328 6.92824e+07 5.29581e+06 21089 3.42476e+07 0 0.130728 0.993619 0.840221 6.88403e+07 0.00288002 1.47807e+07 5.85627e+06 1.4879e+07 172 1.48549e+07 1.19255e+07 0.00244597 1.49722e+07 50.1968 0.00681743 0.996157 0 50.1658 GTEX-ZF29-1326-SM-4WWB6 1 B1 6 pieces 9.2 Esophagus Esophagus - Mucosa 0006920 126 922 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.99062 340865 0.976509 0.993146 0.844671 21634 1 76 0.00258329 151 0 7.22524e+07 0.0230168 266110 7.2751e+07 6.0365e+06 21646 3.59527e+07 0 0.131838 0.993146 0.838881 7.22524e+07 0.00301048 1.62078e+07 1.14806e+07 1.62763e+07 161 1.6318e+07 1.52996e+07 0.00279634 1.63428e+07 50.0381 0.00365782 0.995671 0 50.1055 GTEX-ZF29-1326-SM-DNZYV 1 B1 6 pieces 9.2 Esophagus Esophagus - Mucosa 0006920 126 922 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987898 445540 0.980422 0.991574 0.854084 22829 1 76 0.00243078 286 0 1.0654e+08 0.0191165 418069 1.07445e+08 1.11023e+07 22850 5.29405e+07 0 0.126339 0.991574 0.846887 1.0654e+08 0.00432433 2.3915e+07 1.45894e+07 2.40981e+07 287 2.4268e+07 2.33626e+07 0.00337404 2.41112e+07 49.838 0.003891 0.99525 0 50.1907 GTEX-ZF29-1426-SM-DO11G 0 B1 6 pieces, 2 with residual mucosa (not target) 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 130 918 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988783 292310 0.97877 0.992569 0.848029 22458 1 76 0.0023287 283 0 8.94809e+07 0.0208884 643325 9.01508e+07 8.9572e+06 22484 4.44722e+07 0 0.130741 0.992569 0.841727 8.94809e+07 0.00433608 1.93107e+07 7.33655e+06 1.95202e+07 262 1.96036e+07 1.6986e+07 0.00332856 1.95286e+07 49.9042 0.0071361 0.996355 0 50.2697 GTEX-ZF29-1526-SM-4WKF7 1 B1 6 pieces, mucosa and submucosa 6.6 Stomach Stomach 0000945 133 915 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.984656 248598 0.981751 0.986875 0.84815 22410 1 76 0.00210688 339 0 9.24929e+07 0.0177564 737479 9.3723e+07 7.55501e+06 22434 4.60113e+07 0 0.133601 0.986875 0.837019 9.24929e+07 0.00289419 2.10393e+07 8.72021e+07 2.16179e+07 262 2.16026e+07 2.26705e+07 0.00249965 2.12532e+07 49.5924 0.00786871 0.989095 0 50.6781 GTEX-ZF29-1626-SM-4WKFJ 1 B1 6 pieces, lymphoid tissue well represented. One piece has portion of muscularis (not target). 8.1 Small Intestine Small Intestine - Terminal Ileum 0001211 140 908 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.987699 434059 0.969397 0.990545 0.781376 25230 1 76 0.0023992 280 0 9.77043e+07 0.0301399 510313 9.8637e+07 8.03261e+06 25270 4.85724e+07 0 0.188021 0.990545 0.773987 9.77043e+07 0.00317413 2.15348e+07 1.16463e+07 2.18146e+07 268 2.18448e+07 1.59337e+07 0.00278555 2.17695e+07 49.9136 0.00517365 0.993391 0 50.3228 GTEX-ZF29-1726-SM-4WKFV 1 B1 6 pieces, 3 are muscularis only and 3 are predominantly muscularis, each with small strip of mucosa. 7.7 Colon Colon - Transverse 0001157 147 901 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990689 356580 0.976116 0.993137 0.836834 22539 1 76 0.00202926 210 0 7.94889e+07 0.0235992 458828 8.00382e+07 6.2617e+06 22559 3.95485e+07 0 0.139283 0.993137 0.831091 7.94889e+07 0.00283195 1.72431e+07 7.56388e+06 1.74294e+07 206 1.74402e+07 1.37614e+07 0.00242962 1.74221e+07 49.9741 0.00573261 0.995586 0 50.2687 GTEX-ZF29-1826-SM-4WKG8 0 B1 6 pieces, all with both muscularis and mucosa. 7.4 Colon Colon - Sigmoid 0001159 145 903 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991784 348085 0.976277 0.993689 0.832113 23221 1 76 0.00216302 206 0 7.93364e+07 0.0233886 775672 7.98403e+07 6.30839e+06 23243 3.94853e+07 0 0.144164 0.993689 0.826862 7.93364e+07 0.00289822 1.73157e+07 8.324e+06 1.75711e+07 210 1.75248e+07 1.25535e+07 0.00252992 1.75052e+07 49.972 0.00971529 0.995594 0 50.3661 GTEX-ZF29-1926-SM-5S2P1 1 B1 2 pieces, fibrofatty tissue, epithelium represents <5% 7.8 Breast Breast - Mammary Tissue 0008367 155 893 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99176 268840 0.968029 0.993547 0.762277 23472 1 76 0.00193755 135 0 5.98478e+07 0.0313368 158713 6.02365e+07 4.27147e+06 23498 2.97715e+07 0 0.205752 0.993547 0.757358 5.98478e+07 0.00276599 1.31218e+07 5.62968e+06 1.3198e+07 137 1.31786e+07 1.00653e+07 0.00235103 1.32467e+07 50.1289 0.00263483 0.995335 0 50.1447 GTEX-ZF29-2026-SM-4WWB7 0 B1 2 pieces; diffuse severe microvesicular and macrovesicular steatosis (~80%). 9.1 Liver Liver 0001114 164 884 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.991598 363768 0.981115 0.994006 0.860686 21204 1 76 0.00257384 269 0 1.0582e+08 0.0173839 760200 1.06458e+08 8.61442e+06 21219 5.26251e+07 0 0.12043 0.994006 0.855527 1.0582e+08 0.00287536 2.3105e+07 1.86752e+07 2.31344e+07 283 2.32052e+07 2.39609e+07 0.00272424 2.32753e+07 50.0755 0.00714087 0.996414 0 50.0318 GTEX-ZF29-2026-SM-DNZYW 0 B1 2 pieces; diffuse severe microvesicular and macrovesicular steatosis (~80%). 9.1 Liver Liver 0001114 164 884 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986655 464070 0.985682 0.990442 0.87043 21095 1 76 0.00230638 270 0 1.0986e+08 0.0139631 950621 1.1092e+08 9.69086e+06 21115 5.45895e+07 0 0.115252 0.990442 0.862111 1.0986e+08 0.00448119 2.40088e+07 1.72057e+07 2.41238e+07 285 2.42991e+07 2.57153e+07 0.00338963 2.42085e+07 49.9065 0.00857035 0.994229 0 50.1194 GTEX-ZF29-2126-SM-4WWB8 0 B1 2 pieces, salivary gland elements (~15%), mucosa, stroma, skeletal muscle, and nerve tissue. Acute and chronic sialadenitis. 9.3 Salivary Gland Minor Salivary Gland 0006330 167 881 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.98997 383607 0.971801 0.992815 0.823368 21471 1 76 0.00262204 145 0 6.97762e+07 0.0277565 204588 7.02812e+07 6.0379e+06 21483 3.47076e+07 0 0.148433 0.992815 0.817452 6.97762e+07 0.00313826 1.55595e+07 1.42748e+07 1.56164e+07 151 1.56725e+07 1.44011e+07 0.00287941 1.56985e+07 50.0415 0.00291099 0.995659 0 50.0913 GTEX-ZF29-2126-SM-DNZYX 0 B1 2 pieces, salivary gland elements (~15%), mucosa, stroma, skeletal muscle, and nerve tissue. Acute and chronic sialadenitis. 9.3 Salivary Gland Minor Salivary Gland 0006330 167 881 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987131 459471 0.979066 0.99105 0.841497 22049 1 76 0.00245568 175 0 8.52549e+07 0.0204704 266215 8.60248e+07 9.00049e+06 22066 4.23464e+07 0 0.137568 0.99105 0.833966 8.52549e+07 0.00439171 1.90916e+07 1.27615e+07 1.92236e+07 199 1.93731e+07 1.83404e+07 0.00341987 1.92563e+07 49.8488 0.00309463 0.99497 0 50.1723 GTEX-ZF29-2226-SM-4WWB9 1 B1 2 pieces, both with some central defects suggesting incomplete fixation. One piece predominantly fat, second is 50% fibroconnective tissue. 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 178 870 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990974 377952 0.977415 0.993283 0.82427 23936 1 76 0.00254947 281 0 1.09033e+08 0.0222267 395702 1.0977e+08 8.83337e+06 23973 5.42599e+07 0 0.153145 0.993283 0.818733 1.09033e+08 0.00308844 2.40183e+07 9.85135e+06 2.41519e+07 320 2.4197e+07 2.02771e+07 0.00281833 2.42165e+07 50.0201 0.00360482 0.995591 0 50.1387 GTEX-ZF29-2326-SM-DO92K 1 B1 6 pieces, internal and attached dermal adipose tissue of 5-15% in all pieces 7.4 Skin Skin - Sun Exposed (Lower leg) 0004264 179 869 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994959 524625 0.973994 0.995606 0.819773 23379 1 76 0.00194142 316 0 9.20477e+07 0.0257443 341360 9.24539e+07 5.32782e+06 23410 4.58975e+07 0 0.154221 0.995606 0.816171 9.20477e+07 0.00239548 2.00435e+07 1.08955e+07 2.02141e+07 258 2.02313e+07 1.7384e+07 0.0021683 2.00853e+07 49.8189 0.00369222 0.996254 0 50.2119 GTEX-ZF29-2426-SM-DO92G 1 B1 2 pieces, 5-10% internal and attached adipose tissue. 8.1 Muscle Muscle - Skeletal 0011907 181 867 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995435 694838 0.984549 0.996128 0.878213 20529 1 76 0.00178102 282 0 1.13244e+08 0.0151891 911731 1.13685e+08 5.79468e+06 20545 5.6463e+07 0 0.106336 0.996128 0.874812 1.13244e+08 0.00239246 2.45879e+07 1.11919e+07 2.47764e+07 329 2.48411e+07 2.42275e+07 0.00208653 2.45921e+07 49.7482 0.00801983 0.99682 0 50.191 GTEX-ZF29-2526-SM-DO92N 0 B1 2 pieces, calcific atherosclerosis with narrowing of the lumen. 7.1 Blood Vessel Artery - Tibial 0007610 189 859 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994559 409152 0.975317 0.995227 0.827681 22131 1 76 0.00194792 208 0 8.83021e+07 0.0242883 255671 8.87255e+07 5.39417e+06 22153 4.40208e+07 0 0.147636 0.995227 0.823731 8.83021e+07 0.00225652 1.90291e+07 6.428e+06 1.91796e+07 245 1.91617e+07 1.71562e+07 0.00210211 1.91054e+07 49.9265 0.0028816 0.995896 0 50.197 GTEX-ZF29-2626-SM-4WWBA 1 B1 4 pieces, nerve with 30-50% attached and internal fibroadipose tissue, some central defects suggesting incomplete fixation 5.8 Nerve Nerve - Tibial 0001323 191 857 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991016 318238 0.965206 0.993054 0.765637 24343 1 76 0.00259031 218 0 9.14218e+07 0.0345512 483140 9.20612e+07 7.47538e+06 24380 4.54882e+07 0 0.199568 0.993054 0.760319 9.14218e+07 0.00309106 2.00086e+07 1.10177e+07 2.01553e+07 234 2.01298e+07 1.33867e+07 0.00284017 2.02156e+07 50.1063 0.00524803 0.995092 0 50.1826 GTEX-ZF2S-0002-SM-4YUWS B1 Blood Whole Blood 0013756 -42 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZF2S-0002-SM-53UBA B1 Blood Whole Blood 0013756 -42 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZF2S-0002-SM-6UH39 B1 Blood Whole Blood 0013756 -42 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-6032 09/19/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZF2S-0004-SM-4WKFE B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -42 BP-39146 RNA isolation_Trizol Manual (Cell Pellet) 05/20/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.990865 758358 0.96647 0.993084 0.803781 21727 1 76 0.00211893 222 0 9.23342e+07 0.0331219 1.09573e+06 9.29773e+07 7.389e+06 21750 4.59359e+07 0 0.162688 0.993084 0.798222 9.23342e+07 0.00281584 2.05048e+07 1.56695e+07 2.05203e+07 211 2.05958e+07 2.08797e+07 0.00246661 2.06349e+07 50.0474 0.0117849 0.995302 0 50.0188 GTEX-ZF2S-0006-SM-4WKHF B1 9.2 Blood Whole Blood 0013756 -42 BP-36200 RNA isolation_PAXgene Blood RNA (Manual) 02/19/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.983656 800221 0.959577 0.985626 0.799404 17857 1 76 0.00226872 101 0 6.07208e+07 0.0391093 297714 6.16063e+07 4.71348e+06 17863 3.00901e+07 0 0.160173 0.985626 0.787913 6.07208e+07 0.0034432 1.37621e+07 8.05486e+07 1.39918e+07 117 1.40006e+07 1.47661e+07 0.00285479 1.39024e+07 49.824 0.00483253 0.987596 0 50.4139 GTEX-ZF2S-0008-SM-4E3IK B1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 184 BP-37581 RNA isolation_Trizol Manual (Cell Pellet) 04/04/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990406 872404 0.970438 0.99321 0.855252 21188 1 76 0.00231167 290 0 1.104e+08 0.0292457 403463 1.11154e+08 1.30518e+07 21202 5.49283e+07 0 0.115186 0.99321 0.849445 1.104e+08 0.00304824 2.44263e+07 2.57674e+07 2.45487e+07 294 2.46701e+07 2.70826e+07 0.00267892 2.46102e+07 49.9392 0.00362975 0.996013 0 50.125 GTEX-ZF2S-0126-SM-4WKFO 1 B1 2 pieces. Medullary hyperplasia. 20% external fat 9.5 Adrenal Gland Adrenal Gland 0002369 87 936 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.989674 402571 0.978102 0.992425 0.824069 23687 1 76 0.00197094 271 0 1.01106e+08 0.0215499 1.6113e+06 1.01878e+08 8.34636e+06 23715 5.02894e+07 0 0.154033 0.992425 0.817826 1.01106e+08 0.00274752 2.23436e+07 1.19111e+07 2.24162e+07 292 2.25078e+07 1.74212e+07 0.00235816 2.25086e+07 50.001 0.015816 0.995176 0 50.0811 GTEX-ZF2S-0326-SM-4WKGD 1 B1 2 pieces. Capsule present on larger piece; PLEASE sample beneath capsule. 8.3 Spleen Spleen 0002106 98 925 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.98695 419037 0.96407 0.988881 0.772235 24989 1 76 0.00308466 205 0 9.33171e+07 0.033099 492767 9.43664e+07 7.17125e+06 25028 4.62917e+07 0 0.191836 0.988881 0.763648 9.33171e+07 0.00398706 2.06494e+07 1.91261e+07 2.08212e+07 223 2.08739e+07 1.45103e+07 0.00353498 2.07774e+07 49.8842 0.00522185 0.990812 0 50.2071 GTEX-ZF2S-0426-SM-4WKGP 1 B1 2 pieces; well trimmed 7.3 Pancreas Pancreas 0001150 100 923 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4523 11/21/2013 TruSeq.v1 EXCLUDE 0.992862 193411 0.98235 0.993733 0.867276 20497 1 76 0.0154027 67 0 6.81406e+07 0.0172217 194741 6.85703e+07 2.83345e+07 20510 3.39139e+07 0 0.115075 0.993733 0.86184 6.81406e+07 0.00333358 1.58567e+07 2.87255e+07 1.58756e+07 73 1.57942e+07 2.25384e+07 0.00937342 1.60087e+07 50.3373 0.00284002 0.994604 0 50.0298 GTEX-ZF2S-0626-SM-4WKH2 1 B1 2 pieces. Patchy bronchopneumonia 8 Lung Lung 0008952 116 907 BP-42588 RNA Extraction from Paxgene-derived Lysate Plate Based 08/22/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.988892 344685 0.970092 0.991822 0.770042 24891 1 76 0.00225104 159 0 7.76835e+07 0.0293916 296773 7.8324e+07 5.99454e+06 24922 3.86078e+07 0 0.200051 0.991822 0.763744 7.76835e+07 0.00315088 1.71441e+07 8.33419e+06 1.73207e+07 172 1.73691e+07 1.31681e+07 0.00269963 1.73185e+07 49.9272 0.00378904 0.994752 0 50.2563 GTEX-ZF2S-0826-SM-4WWBI 0 B1 2 pieces; 1 with 50% external and internal fat, other with 20% fibroadipose tissue, internal and external 8 Heart Heart - Atrial Appendage 0006631 123 900 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991177 284151 0.976556 0.993893 0.832917 22078 1 76 0.00236786 153 0 7.21558e+07 0.0231489 1.77781e+06 7.25992e+07 5.75491e+06 22094 3.59103e+07 0 0.143639 0.993893 0.827831 7.21558e+07 0.00276604 1.54537e+07 1.20685e+07 1.5537e+07 195 1.549e+07 1.15121e+07 0.00256641 1.56921e+07 50.3241 0.0244881 0.996609 0 50.1346 GTEX-ZF2S-0926-SM-4WWBJ 0 B1 6 pieces, well trimmed; no plaques 7 Blood Vessel Artery - Aorta 0001496 116 907 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990208 605052 0.968453 0.992973 0.838877 22856 1 76 0.00242247 213 0 8.87465e+07 0.0311637 282829 8.93745e+07 7.56568e+06 22876 4.41253e+07 0 0.129575 0.992973 0.832983 8.87465e+07 0.0030408 1.89759e+07 1.28865e+07 1.91035e+07 221 1.91003e+07 1.67613e+07 0.00273077 1.92264e+07 50.1646 0.00316454 0.995738 0 50.1675 GTEX-ZF2S-1026-SM-4WWB1 0 B1 2 pieces. Contraction bands. 9.2 Heart Heart - Left Ventricle 0006566 128 895 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.992158 413343 0.980279 0.994142 0.863016 21494 1 76 0.0023064 267 0 9.4406e+07 0.0194522 1.57928e+06 9.49623e+07 7.65924e+06 21508 4.7023e+07 0 0.117263 0.994142 0.85796 9.4406e+07 0.00265983 2.08485e+07 1.76395e+07 2.09312e+07 285 2.08432e+07 1.71221e+07 0.00248276 2.11144e+07 50.3231 0.0166306 0.996125 0 50.0989 GTEX-ZF2S-1026-SM-7KFSP 0 B1 2 pieces. Contraction bands. 9.2 Heart Heart - Left Ventricle 0006566 128 895 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-6680 02/26/2015 TruSeq.v1 EXCLUDE 0.993408 261772 0.985675 0.995166 0.878528 20751 1 76 0.00265121 199 0 7.90676e+07 0.0140468 1.43031e+06 7.94517e+07 6.02263e+06 20760 3.93707e+07 0 0.107147 0.995166 0.874281 7.90676e+07 0.00251218 1.73516e+07 1.10923e+07 1.7649e+07 225 1.76552e+07 1.51199e+07 0.00258182 1.74617e+07 49.7245 0.0180023 0.996923 0 50.4249 GTEX-ZF2S-1026-SM-9QEGK 0 B1 2 pieces. Contraction bands. 9.2 Heart Heart - Left Ventricle 0006566 128 895 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-7199 06/06/2015 TruSeq.v1 RNASEQ 0.990989 378737 0.984801 0.993984 0.869284 22016 1 76 0.00152447 272 0 1.25669e+08 0.0149361 2.63923e+06 1.26429e+08 5.67613e+06 22032 6.25447e+07 0 0.115516 0.993984 0.864055 1.25669e+08 0.00358987 2.76675e+07 2.30583e+07 2.76931e+07 325 2.76864e+07 2.26771e+07 0.00255406 2.79767e+07 50.2607 0.0208752 0.996978 0 50.0232 GTEX-ZF2S-1126-SM-4WKHH 0 B1 6 pieces, well dissected 8.8 Esophagus Esophagus - Muscularis 0004648 134 889 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991927 301283 0.97666 0.993767 0.84475 22292 1 76 0.00186423 204 0 8.02428e+07 0.0230593 527002 8.07461e+07 6.32661e+06 22309 3.99494e+07 0 0.131911 0.993767 0.839484 8.02428e+07 0.0026221 1.71592e+07 6.90202e+06 1.73505e+07 219 1.72695e+07 1.44913e+07 0.00224246 1.73837e+07 50.1648 0.00652665 0.995607 0 50.2772 GTEX-ZF2S-1226-SM-4WWAX 1 B1 6 pieces. Well dissected mucosa 9.4 Esophagus Esophagus - Mucosa 0006920 135 888 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989548 636829 0.966141 0.991978 0.821037 23642 1 76 0.00255988 290 0 1.02729e+08 0.0334494 489373 1.03559e+08 8.80094e+06 23660 5.11251e+07 0 0.145104 0.991978 0.814451 1.02729e+08 0.00307109 2.27146e+07 2.50112e+07 2.28713e+07 275 2.29109e+07 2.09461e+07 0.00281486 2.29244e+07 50.0147 0.00472554 0.994408 0 50.1718 GTEX-ZF2S-1326-SM-4WWAZ 1 B1 6 pieces, generally well dissected 8.7 Esophagus Esophagus - Gastroesophageal Junction 0004550 137 886 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991477 350805 0.973041 0.993906 0.830539 22638 1 76 0.00236236 163 0 7.71671e+07 0.0266703 525227 7.76402e+07 6.39499e+06 22656 3.83954e+07 0 0.142502 0.993906 0.825478 7.71671e+07 0.00303934 1.65151e+07 6.49707e+06 1.66162e+07 181 1.65812e+07 1.42802e+07 0.00270002 1.67257e+07 50.2168 0.00676488 0.996335 0 50.1526 GTEX-ZF2S-1426-SM-57WET 2 B1 6 pieces. Mucosa and submucosa; sloughing of superficial (foveolar) glands 6.4 Stomach Stomach 0000945 141 882 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.986046 246221 0.977033 0.989504 0.82639 22577 1 76 0.00274184 212 0 6.07139e+07 0.0221499 856536 6.13579e+07 8.43851e+06 22593 3.01339e+07 0 0.150643 0.989504 0.817716 6.07139e+07 0.00480436 1.38358e+07 3.72616e+07 1.37841e+07 173 1.37924e+07 1.10495e+07 0.0037695 1.40249e+07 50.4179 0.0139597 0.992962 0 49.9064 GTEX-ZF2S-1526-SM-5S2OO 1 B1 2 pieces. Overly large specimens with central hollow defects. 7.2 Adipose Tissue Adipose - Visceral (Omentum) 0010414 147 876 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.991968 200991 0.97479 0.993795 0.833171 21632 1 76 0.0017871 150 0 6.61507e+07 0.0246571 690352 6.65637e+07 4.79323e+06 21647 3.29146e+07 0 0.141619 0.993795 0.828001 6.61507e+07 0.00257787 1.44245e+07 8.05976e+06 1.4697e+07 171 1.46063e+07 1.07076e+07 0.00218176 1.46246e+07 50.0313 0.0103713 0.995622 0 50.468 GTEX-ZF2S-1626-SM-57WES 1 B1 6 pieces, well dissected 7.2 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 145 878 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.985651 447700 0.973619 0.990073 0.834075 23782 1 76 0.00247292 224 0 9.13857e+07 0.0261531 630870 9.23019e+07 1.42643e+07 23805 4.53617e+07 0 0.139545 0.990073 0.825795 9.13857e+07 0.00459075 1.99115e+07 1.21575e+07 2.00805e+07 244 2.00972e+07 1.6058e+07 0.00352711 2.02846e+07 50.2321 0.00683485 0.994495 0 50.2112 GTEX-ZF2S-1726-SM-57WFT 1 B1 6 pieces. Mucosa with some muscularis propria. Plenty of mucosal lymphoid tissue (marked). Superficial mucosa is sloughed. 8.3 Small Intestine Small Intestine - Terminal Ileum 0001211 150 873 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.986341 388981 0.972978 0.990799 0.820622 24060 1 76 0.00239983 171 0 7.99954e+07 0.02672 600393 8.07383e+07 1.20964e+07 24081 3.97041e+07 0 0.152357 0.990799 0.813071 7.99954e+07 0.00481526 1.73181e+07 7.81642e+06 1.74448e+07 195 1.74974e+07 1.33316e+07 0.00360211 1.75976e+07 50.1428 0.00743629 0.995257 0 50.1821 GTEX-ZF2S-1826-SM-4WKFF 1 B1 6 pieces. 3 have foci of mucosa (not the target). 6.2 Colon Colon - Sigmoid 0001159 155 868 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4170 10/28/2013 TruSeq.v1 RNASEQ 0.991656 398785 0.974137 0.993613 0.826101 23172 1 76 0.00190468 374 0 9.88876e+07 0.0256628 1.23496e+06 9.95233e+07 7.54607e+06 23200 4.92164e+07 0 0.148036 0.993613 0.820824 9.88876e+07 0.00279696 2.14485e+07 1.0427e+07 2.16136e+07 339 2.14992e+07 1.49177e+07 0.00234994 2.17507e+07 50.2908 0.0124088 0.995569 0 50.1917 GTEX-ZF2S-1926-SM-4WWAN 1 B1 6 pieces, well dissected full thickness. 7.5 Colon Colon - Transverse 0001157 159 864 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.987201 455011 0.968518 0.989689 0.805057 23614 1 76 0.00272078 174 0 7.97696e+07 0.0304896 1.01915e+06 8.06007e+07 6.4911e+06 23646 3.96555e+07 0 0.163461 0.989689 0.796756 7.97696e+07 0.00323226 1.76375e+07 1.47001e+07 1.7796e+07 195 1.78167e+07 1.31326e+07 0.00297588 1.78108e+07 49.9918 0.0126444 0.992177 0 50.2237 GTEX-ZF2S-2026-SM-5E461 0 B1 2 pieces. lobular neoplasia, grade 2 (atypical lobular hyperplasia). 7.9 Breast Breast - Mammary Tissue 0008367 167 856 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4635 02/13/2014 TruSeq.v1 RNASEQ 0.986803 301490 0.965685 0.99038 0.749157 26396 1 76 0.00233898 209 0 9.17485e+07 0.0337666 324977 9.26396e+07 1.58124e+07 26442 4.55861e+07 0 0.216528 0.99038 0.741951 9.17485e+07 0.00486636 2.00394e+07 9.66582e+06 2.01577e+07 213 2.02482e+07 1.56662e+07 0.0035981 2.02591e+07 50.0135 0.00350797 0.993958 0 50.1472 GTEX-ZF2S-2126-SM-4WWAY 1 B1 2 pieces. No extraneous fat. 9 Muscle Muscle - Skeletal 0011907 178 845 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.992089 292884 0.982907 0.994201 0.866074 21268 1 76 0.0022733 271 0 9.74375e+07 0.016855 1.31741e+06 9.80058e+07 7.92606e+06 21277 4.85276e+07 0 0.116833 0.994201 0.861052 9.74375e+07 0.00268623 2.10961e+07 1.16572e+07 2.12472e+07 289 2.11948e+07 1.88436e+07 0.00247933 2.13361e+07 50.1662 0.0134422 0.996313 0 50.1785 GTEX-ZF2S-2326-SM-4WWCE 1 B1 6 pieces. well dissected. 8.5 Skin Skin - Sun Exposed (Lower leg) 0004264 184 839 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991867 287190 0.971573 0.993811 0.820215 21964 1 76 0.00254462 180 0 6.30683e+07 0.028128 166685 6.3461e+07 5.03948e+06 21981 3.13995e+07 0 0.151358 0.993811 0.815139 6.30683e+07 0.00310046 1.36159e+07 7.59247e+06 1.36445e+07 149 1.36723e+07 1.15851e+07 0.002822 1.37085e+07 50.0662 0.00262657 0.995756 0 50.0524 GTEX-ZF2S-2426-SM-5DUXV 0 B1 2 pieces. small amount of periadventitial fat and fibrous tissue 6.9 Blood Vessel Artery - Tibial 0007610 193 830 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4634 02/09/2014 TruSeq.v1 RNASEQ 0.98973 340159 0.975216 0.992015 0.856301 22224 1 76 0.00178697 174 0 7.40117e+07 0.0243706 401725 7.46074e+07 6.30958e+06 22239 3.68282e+07 0 0.118916 0.992015 0.849463 7.40117e+07 0.00289171 1.59467e+07 1.03852e+07 1.61232e+07 180 1.61078e+07 1.60691e+07 0.00233806 1.61258e+07 50.0279 0.00538452 0.9943 0 50.2752 GTEX-ZF2S-2526-SM-5CVNT 1 B1 4 pieces. up to 40% perineural fibroadipose tissue 6.4 Nerve Nerve - Tibial 0001323 188 835 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4633 02/15/2014 TruSeq.v1 RNASEQ 0.984996 255300 0.968238 0.989316 0.77103 24877 1 76 0.00487376 154 0 7.8523e+07 0.0314593 444609 7.9371e+07 1.54895e+07 24916 3.89445e+07 0 0.197208 0.989316 0.762792 7.8523e+07 0.00714904 1.7192e+07 8.81816e+06 1.7382e+07 159 1.74416e+07 1.24265e+07 0.00600643 1.74551e+07 50.0193 0.00560165 0.993635 0 50.2748 GTEX-ZF2S-3026-SM-4WWCH 1 B1 2 pieces. 9.5 Liver Liver 0001114 89 934 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990346 473572 0.973361 0.993198 0.860867 20378 1 76 0.00247105 128 0 7.25524e+07 0.0263628 605677 7.30492e+07 5.89253e+06 20393 3.60973e+07 0 0.112494 0.993198 0.855011 7.25524e+07 0.00291193 1.54379e+07 1.70399e+07 1.55303e+07 149 1.55876e+07 1.75431e+07 0.00269086 1.55783e+07 49.985 0.00829135 0.99605 0 50.1492 GTEX-ZF3C-0001-SM-4WWAW C1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 385 BP-39146 RNA isolation_Trizol Manual (Cell Pellet) 05/20/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.99133 825946 0.95957 0.993482 0.819731 21468 1 76 0.00279865 170 0 8.05244e+07 0.0398255 386878 8.10527e+07 6.33462e+06 21491 4.00685e+07 0 0.139839 0.993482 0.814388 8.05244e+07 0.00320749 1.76795e+07 2.03655e+07 1.78171e+07 169 1.78598e+07 1.78175e+07 0.00300263 1.78092e+07 49.9291 0.00477316 0.995633 0 50.1939 GTEX-ZF3C-0002-SM-4YUXH C1 Blood Whole Blood 0013756 385 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZF3C-0002-SM-53UBG C1 Blood Whole Blood 0013756 385 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZF3C-0002-SM-6UH3H C1 Blood Whole Blood 0013756 385 BP-36203 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/19/2013 LCSET-6032 09/21/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZF3C-0005-SM-4WWAR C1 8.2 Blood Whole Blood 0013756 385 BP-36200 RNA isolation_PAXgene Blood RNA (Manual) 02/19/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.981882 1.18457e+06 0.944167 0.984754 0.751664 19159 1 76 0.00311642 111 0 7.15237e+07 0.054717 188637 7.2631e+07 6.16127e+06 19173 3.55031e+07 0 0.192504 0.984754 0.740204 7.15237e+07 0.00414916 1.56744e+07 8.78401e+07 1.582e+07 122 1.58834e+07 1.4976e+07 0.00363129 1.58404e+07 49.9323 0.0025972 0.987626 0 50.231 GTEX-ZF3C-0008-SM-4E3IL C1 9.9 Skin Cells - Cultured fibroblasts EFO_0002009 453 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988534 930103 0.970154 0.99185 0.847528 21856 1 76 0.00242235 286 0 1.05573e+08 0.0294883 246734 1.06441e+08 1.24301e+07 21880 5.24725e+07 0 0.122626 0.99185 0.84062 1.05573e+08 0.00346169 2.33191e+07 1.91789e+07 2.34339e+07 287 2.36068e+07 2.33412e+07 0.00294029 2.3484e+07 49.8697 0.00231804 0.995165 0 50.1228 GTEX-ZF3C-0126-SM-DO92D 1 C1 6 pieces, 5-30% internal and attached dermal adipose tissue. Squamous epithelium measures 35 to 60 microns thick. 7.8 Skin Skin - Sun Exposed (Lower leg) 0004264 452 646 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995011 433495 0.978425 0.995639 0.822136 22951 1 76 0.00200123 304 0 9.26062e+07 0.0213145 609448 9.30119e+07 5.37521e+06 22979 4.61768e+07 0 0.156288 0.995639 0.818551 9.26062e+07 0.00239728 2.02075e+07 9.75462e+06 2.03222e+07 261 2.03275e+07 1.75359e+07 0.00219913 2.02609e+07 49.9179 0.00655237 0.996267 0 50.1415 GTEX-ZF3C-0226-SM-4WWB3 1 C1 2 pieces, one is fat with attached larger vessel, second has ~15% fibrovascular tissue 6.3 Adipose Tissue Adipose - Subcutaneous 0002190 455 644 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.98852 374071 0.977176 0.991471 0.792817 24230 1 76 0.00263147 215 0 9.97623e+07 0.0224951 481776 1.00621e+08 8.54636e+06 24261 4.95967e+07 0 0.184358 0.991471 0.786055 9.97623e+07 0.00320966 2.19384e+07 1.08367e+07 2.20488e+07 253 2.20927e+07 1.75017e+07 0.0029197 2.2182e+07 50.1008 0.00478805 0.994422 0 50.1256 GTEX-ZF3C-0326-SM-4WWBF 1 C1 2 pieces, one includes ~20% internal and attached adipose tissue, one includes portion of tendon 8.4 Muscle Muscle - Skeletal 0011907 477 622 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990507 375855 0.981118 0.993173 0.860523 20234 1 76 0.00247368 213 0 8.25055e+07 0.018647 1.06426e+06 8.30726e+07 6.87812e+06 20247 4.10605e+07 0 0.120595 0.993173 0.854649 8.25055e+07 0.00293812 1.797e+07 9.60743e+06 1.80769e+07 214 1.81043e+07 1.62708e+07 0.00270528 1.81449e+07 50.056 0.0128112 0.99584 0 50.1483 GTEX-ZF3C-0526-SM-4WWBG 1 C1 2 pieces, well trimmed 7.4 Blood Vessel Artery - Tibial 0007610 482 618 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989299 453728 0.972889 0.992573 0.826918 21568 1 76 0.00248363 160 0 7.45852e+07 0.026699 275072 7.51433e+07 6.28436e+06 21586 3.70537e+07 0 0.145972 0.992573 0.820776 7.45852e+07 0.00336315 1.58314e+07 6.55602e+06 1.59328e+07 166 1.59464e+07 1.49487e+07 0.00292194 1.60546e+07 50.169 0.00366063 0.995847 0 50.1596 GTEX-ZF3C-0626-SM-DO92O 1 C1 6 pieces, up to 15% attached and internal fat. 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 535 567 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994451 240526 0.972636 0.995008 0.844128 23287 1 76 0.0019109 282 0 8.85478e+07 0.0271441 464656 8.8992e+07 5.07013e+06 23305 4.41475e+07 0 0.128508 0.995008 0.839915 8.85478e+07 0.00250567 1.93716e+07 9.08603e+06 1.9541e+07 277 1.94381e+07 1.59137e+07 0.00220812 1.95284e+07 50.1159 0.00522132 0.995565 0 50.2177 GTEX-ZF3C-0826-SM-DO11E 2 C1 2 pieces, small focus of cartilage at edge of one piece 6 Thyroid Thyroid 0002046 554 549 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986726 222197 0.968537 0.990394 0.761462 23793 1 76 0.00265941 131 0 6.6262e+07 0.0311332 217159 6.69047e+07 7.34693e+06 23819 3.29083e+07 0 0.207075 0.990394 0.754148 6.6262e+07 0.0044279 1.44184e+07 6.22018e+06 1.45367e+07 141 1.46024e+07 1.13589e+07 0.00354038 1.45806e+07 49.9628 0.0032458 0.994063 0 50.2043 GTEX-ZF3C-0926-SM-DO92P 1 C1 2 pieces; lung with hemosiderin-laden macrophages in airspaces and some interstitial fibrosis. 6.2 Lung Lung 0008952 556 548 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993042 551145 0.97445 0.993838 0.758441 24001 1 76 0.00225868 160 0 7.94524e+07 0.0252288 287025 7.9945e+07 5.16781e+06 24035 3.95668e+07 0 0.216009 0.993838 0.753768 7.94524e+07 0.00276859 1.75586e+07 7.55622e+06 1.76565e+07 176 1.76465e+07 1.30899e+07 0.00251343 1.76335e+07 49.9816 0.00359028 0.994634 0 50.1389 GTEX-ZF3C-1026-SM-5S2OC 0 C1 2 pieces, adipose tissue with few larger vessels(<5%) 7.1 Adipose Tissue Adipose - Visceral (Omentum) 0010414 557 547 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.98996 181430 0.976719 0.992441 0.803741 21582 1 76 0.00190914 127 0 5.50197e+07 0.0229659 196055 5.54388e+07 3.80601e+06 21601 2.73527e+07 0 0.172978 0.992441 0.797665 5.50197e+07 0.00285482 1.20252e+07 5.75502e+06 1.21403e+07 134 1.21225e+07 9.72508e+06 0.0023808 1.21777e+07 50.1135 0.00353642 0.994921 0 50.2382 GTEX-ZF3C-1126-SM-57WEG 0 C1 2 pieces; interstitial and patchy fibrosis 6 Heart Heart - Atrial Appendage 0006631 559 546 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.987907 319526 0.977198 0.991392 0.786932 21969 1 76 0.00288695 152 0 7.95735e+07 0.0226249 2.57596e+06 8.02644e+07 1.17449e+07 21991 3.95289e+07 0 0.190266 0.991392 0.780158 7.95735e+07 0.00493576 1.74189e+07 1.20737e+07 1.73063e+07 197 1.7332e+07 9.66458e+06 0.00390776 1.7638e+07 50.4375 0.0320934 0.994878 0 49.8379 GTEX-ZF3C-1226-SM-4WWCB 0 C1 2 pieces patch of fibrosis c/w prior infarction, increased interstital fibrosis 7.6 Heart Heart - Left Ventricle 0006566 561 544 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990375 202007 0.986903 0.992847 0.870497 18636 1 76 0.00341521 364 0 8.35311e+07 0.012675 6.33262e+06 8.41329e+07 6.80107e+06 18641 4.15542e+07 0 0.116407 0.992847 0.86427 8.35311e+07 0.0040922 1.8538e+07 2.76007e+07 1.88032e+07 369 1.86128e+07 3.51533e+06 0.00375286 1.89384e+07 50.4335 0.0752692 0.995319 0 50.3552 GTEX-ZF3C-1326-SM-5A5MF 1 C1 2 pieces, vessel represents ~20% of each piece, abundant attached fat and myocardium 9.4 Blood Vessel Artery - Coronary 0001621 566 540 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4423 01/29/2014 TruSeq.v1 RNASEQ 0.990016 370793 0.968814 0.992191 0.720952 24658 1 76 0.00221145 165 0 9.07379e+07 0.0309468 354853 9.14521e+07 9.99672e+06 24706 4.51428e+07 0 0.247862 0.992191 0.715322 9.07379e+07 0.00403023 1.97375e+07 1.02012e+07 1.99989e+07 199 2.00084e+07 1.38732e+07 0.00311885 1.99148e+07 49.8827 0.00388021 0.994366 0 50.3289 GTEX-ZF3C-1426-SM-4WWCD 1 C1 6 pieces; severe calcific atherosclerosis 8.4 Blood Vessel Artery - Aorta 0001496 566 541 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988127 433393 0.967137 0.990372 0.722118 23690 1 76 0.00288243 170 0 8.81111e+07 0.0325612 240675 8.89676e+07 7.22344e+06 23732 4.37568e+07 0 0.245019 0.990372 0.715166 8.81111e+07 0.00359838 1.9007e+07 9.85093e+06 1.9134e+07 191 1.9123e+07 1.27345e+07 0.00323959 1.92167e+07 50.1221 0.0027052 0.992618 0 50.1666 GTEX-ZF3C-1626-SM-4WWB4 0 C1 6 pieces, well trimmed 7.8 Esophagus Esophagus - Mucosa 0006920 570 538 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988555 758542 0.960983 0.991231 0.735049 24238 1 76 0.0026667 211 0 1.00592e+08 0.0387952 368632 1.01482e+08 7.9032e+06 24276 5.00123e+07 0 0.225933 0.991231 0.728603 1.00592e+08 0.00322067 2.22231e+07 2.14911e+07 2.22786e+07 224 2.23272e+07 1.58822e+07 0.00294294 2.24565e+07 50.1444 0.00363248 0.993906 0 50.0623 GTEX-ZF3C-2026-SM-4WWB5 2 C1 2 pieces, focal atrophy and fibrosis, interstitial fibrosis 5.9 Pancreas Pancreas 0001150 577 535 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.987997 1.00247e+06 0.952357 0.990351 0.74427 23844 1 76 0.00287992 134 0 9.16762e+07 0.0474179 399283 9.25694e+07 7.14752e+06 23880 4.55808e+07 0 0.208087 0.990351 0.737089 9.16762e+07 0.00356504 2.0131e+07 3.60942e+07 2.02899e+07 150 2.03178e+07 1.94703e+07 0.00322167 2.03516e+07 50.0416 0.00431334 0.992704 0 50.1966 GTEX-ZF3C-2326-SM-5S2MZ 0 C1 2 pieces, each ~90% fat, ductal elements present 6.2 Breast Breast - Mammary Tissue 0008367 583 530 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.993049 170695 0.974667 0.994005 0.77802 23529 1 76 0.00199158 160 0 7.22875e+07 0.0248633 354775 7.27235e+07 4.51489e+06 23557 3.59861e+07 0 0.196647 0.994005 0.773356 7.22875e+07 0.00268427 1.5835e+07 7.48974e+06 1.60154e+07 171 1.59311e+07 1.1474e+07 0.00233759 1.59855e+07 50.0853 0.00487841 0.994961 0 50.2832 GTEX-ZF3C-2326-SM-5S2NC 0 C1 2 pieces, each ~90% fat, ductal elements present 6.7 Breast Breast - Mammary Tissue 0008367 583 530 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.98985 193684 0.971406 0.990877 0.799165 24237 1 76 0.0020531 172 0 7.62723e+07 0.0276743 265599 7.69745e+07 5.20917e+06 24266 3.79375e+07 0 0.172242 0.990877 0.791874 7.62723e+07 0.0027601 1.66644e+07 9.16667e+06 1.67778e+07 185 1.66826e+07 1.33978e+07 0.00240623 1.68417e+07 50.2373 0.00345048 0.991904 0 50.1696 GTEX-ZG7Y-0001-SM-4YUVR B1 Blood Whole Blood 0013756 -148 BP-36344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZG7Y-0001-SM-53UAX B1 Blood Whole Blood 0013756 -148 BP-36344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZG7Y-0001-SM-6UH3L B1 Blood Whole Blood 0013756 -148 BP-36344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2013 LCSET-6032 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) EXCLUDE GTEX-ZG7Y-0001-SM-7FG68 B1 Blood Whole Blood 0013756 -148 BP-36344 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/21/2013 LCSET-6831,LCSET-6976 03/19/2015 PCR-Free 30x Coverage WGS v1 (HiSeqX) WGS GTEX-ZG7Y-0003-SM-4WWEJ B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -148 BP-39146 RNA isolation_Trizol Manual (Cell Pellet) 05/20/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987817 886192 0.956213 0.990245 0.811868 21360 1 76 0.00296014 174 0 8.99020e+07 0.0433385 847492 9.07876e+07 1.2466e+07 21384 4.46828e+07 0 0.144345 0.990245 0.803949 8.99020e+07 0.00420284 1.97198e+07 2.82708e+07 1.97831e+07 197 1.98309e+07 2.05187e+07 0.00357996 1.98902e+07 50.0746 0.00933488 0.992674 0 50.0801 GTEX-ZG7Y-0006-SM-4WWEA B1 5.7 Blood Whole Blood 0013756 -148 BP-36404 RNA isolation_PAXgene Blood RNA (Manual) 02/25/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.983154 1.74643e+06 0.922952 0.986493 0.775892 17691 1 76 0.00329855 127 0 8.12075e+07 0.0762683 550776 8.23194e+07 1.06889e+07 17702 4.03075e+07 0 0.147061 0.986493 0.765412 8.12075e+07 0.00539158 1.70151e+07 8.84749e+07 1.71442e+07 147 1.71937e+07 1.62871e+07 0.00434152 1.7273e+07 50.115 0.00669072 0.989832 0 50.1889 GTEX-ZG7Y-0126-SM-4WWEX 1 B1 6 pieces, adherent serosal fat up to 2mm on 3 6.4 Blood Vessel Artery - Aorta 0001496 177 1107 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987013 307621 0.976827 0.989993 0.856648 22645 1 76 0.00255904 274 0 9.41864e+07 0.0227843 426441 9.51385e+07 1.33297e+07 22665 4.6815e+07 0 0.120179 0.989993 0.848075 9.41864e+07 0.00420878 2.05651e+07 8.21104e+06 2.0591e+07 272 2.06179e+07 1.86573e+07 0.00338143 2.08075e+07 50.2289 0.00448232 0.992972 0 50.0314 GTEX-ZG7Y-0326-SM-4WWEY 1 B1 2 pieces, mild interstitial fibrosis; Islets well-seen, rep. ones delineated 5.7 Pancreas Pancreas 0001150 194 1091 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.9843 614550 0.96444 0.987663 0.837318 22055 1 76 0.00262508 124 0 8.70091e+07 0.0353474 527056 8.8096e+07 1.15626e+07 22081 4.32373e+07 0 0.127122 0.987663 0.826988 8.70091e+07 0.0045927 1.96173e+07 3.8577e+07 1.98164e+07 146 1.97995e+07 2.30298e+07 0.00360554 1.99329e+07 50.1678 0.00598275 0.991026 0 50.2524 GTEX-ZG7Y-0926-SM-5EQ6O 1 B1 2 pieces, increased interstitital lymphocytes suggests myocarditis. 7.6 Heart Heart - Left Ventricle 0006566 211 1076 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4767 02/09/2014 TruSeq.v1 RNASEQ 0.991458 324764 0.986633 0.993488 0.860597 20746 1 76 0.00198966 269 0 1.08018e+08 0.0131394 2.11587e+06 1.08726e+08 1.22424e+07 20761 5.37952e+07 0 0.126036 0.993488 0.854993 1.08018e+08 0.00289714 2.37796e+07 3.17569e+07 2.37341e+07 330 2.35401e+07 1.71299e+07 0.00244247 2.41745e+07 50.6647 0.0194605 0.995517 0 49.9521 GTEX-ZG7Y-1026-SM-4WWDG 1 B1 2 pieces, patchy acute pneumonitis/bronchitis, aggregates of acute inflammatory cells/ multinculeated giant cells delineated, some features suggest possible aspiration event 7.6 Lung Lung 0008952 215 1072 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.984029 343752 0.974103 0.987378 0.7982 24374 1 76 0.00274708 274 0 9.69544e+07 0.0254752 410164 9.81938e+07 1.35802e+07 24405 4.81599e+07 0 0.175902 0.987378 0.788126 9.69544e+07 0.00417611 2.14685e+07 1.05951e+07 2.15657e+07 260 2.16354e+07 1.79953e+07 0.00345917 2.17142e+07 50.0908 0.00417709 0.990727 0 50.113 GTEX-ZG7Y-1126-SM-4WWEZ 1 B1 6 pieces, all with squamous mucosa, switched with eosphageal muscularis aliquots; must be re-labeled before archiving--good specimens 8.1 Esophagus Esophagus - Mucosa 0006920 218 1070 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987553 475995 0.968794 0.990913 0.826537 22146 1 76 0.00277344 182 0 8.40604e+07 0.0306428 584210 8.48313e+07 1.11897e+07 22161 4.17584e+07 0 0.142257 0.990913 0.819026 8.40604e+07 0.00452554 1.8608e+07 1.87354e+07 1.86036e+07 192 1.86648e+07 1.6833e+07 0.00364652 1.88266e+07 50.2158 0.00688673 0.994274 0 49.9941 GTEX-ZG7Y-1326-SM-4WWBL 1 B1 6 pieces, all muscularis, switch with -1125, can use after labeling is corrected 7.8 Esophagus Esophagus - Muscularis 0004648 227 1062 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991101 361046 0.973386 0.993507 0.809781 22340 1 76 0.00248439 180 0 7.88959e+07 0.0263633 716295 7.94115e+07 6.429e+06 22359 3.92448e+07 0 0.163605 0.993507 0.804523 7.88959e+07 0.00324199 1.70583e+07 8.46642e+06 1.71708e+07 194 1.71509e+07 1.29474e+07 0.00286227 1.72662e+07 50.1674 0.00902004 0.995912 0 50.1644 GTEX-ZG7Y-1426-SM-4WWBM 1 B1 2 pieces 8.5 Heart Heart - Atrial Appendage 0006631 231 1059 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.992415 292926 0.979448 0.9944 0.850041 22524 1 76 0.00247302 269 0 9.5456e+07 0.0202371 1.37863e+06 9.59936e+07 7.88291e+06 22542 4.75459e+07 0 0.129407 0.9944 0.845281 9.5456e+07 0.0027916 2.05672e+07 1.27942e+07 2.06245e+07 281 2.06004e+07 1.668e+07 0.00263199 2.07747e+07 50.2106 0.0143617 0.996385 0 50.0696 GTEX-ZG7Y-1626-SM-5S2NO 1 B1 2 pieces, marked interstital fibrosis, prominent vessels, rep areas delineated. Suggests remote peritonititis. 7 Adipose Tissue Adipose - Visceral (Omentum) 0010414 236 1055 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.99304 223466 0.974846 0.994649 0.810707 21449 1 76 0.00171939 126 0 5.50584e+07 0.0248915 231829 5.53546e+07 4.00779e+06 21464 2.74029e+07 0 0.164139 0.994649 0.806369 5.50584e+07 0.00263942 1.21134e+07 5.22725e+06 1.22144e+07 138 1.21732e+07 9.51234e+06 0.00217866 1.22426e+07 50.1421 0.00418807 0.996258 0 50.2076 GTEX-ZG7Y-1826-SM-4WWD3 1 B1 6 pieces, all muscularis, good specimens 6.6 Colon Colon - Sigmoid 0001159 248 1043 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990322 449226 0.967164 0.992797 0.802345 22939 1 76 0.00254166 169 0 7.98484e+07 0.0326021 642077 8.04278e+07 6.63489e+06 22960 3.97112e+07 0 0.16482 0.992797 0.796565 7.98484e+07 0.00317114 1.72428e+07 1.12052e+07 1.73548e+07 193 1.73317e+07 1.28976e+07 0.00285561 1.74585e+07 50.1823 0.00798327 0.995271 0 50.1617 GTEX-ZG7Y-1926-SM-DNZZ5 1 B1 6 pieces, abundant lymphoid aggregates, ~20% of sections;good specimens 6.8 Small Intestine Small Intestine - Terminal Ileum 0001211 251 1041 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988207 259234 0.968703 0.992096 0.802589 23300 1 76 0.00263981 158 0 7.04019e+07 0.0308193 1.14292e+06 7.09628e+07 7.04601e+06 23320 3.49828e+07 0 0.166113 0.992096 0.796246 7.04019e+07 0.00473146 1.54302e+07 1.28435e+07 1.57043e+07 178 1.57264e+07 9.59314e+06 0.00368154 1.56436e+07 49.8681 0.016106 0.995986 0 50.4403 GTEX-ZG7Y-2026-SM-DO91N 1 B1 2 pieces, well -preserved 7.2 Spleen Spleen 0002106 256 1037 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994376 441376 0.963341 0.994991 0.739647 24733 1 76 0.0023663 203 0 9.17725e+07 0.0358734 713713 9.22346e+07 5.00904e+06 24779 4.57248e+07 0 0.223694 0.994991 0.735942 9.17725e+07 0.00283389 2.02102e+07 9.16170e+06 2.02598e+07 232 2.02881e+07 1.29425e+07 0.00259995 2.02318e+07 49.9306 0.00773802 0.995605 0 50.0613 GTEX-ZG7Y-2126-SM-DO117 1 B1 6 pieces, mucosa fairly well preserved, ~10-15% thickness 6.7 Colon Colon - Transverse 0001157 257 1036 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987991 366323 0.975198 0.991555 0.823269 24830 1 76 0.00264343 293 0 1.12761e+08 0.0238474 1.74847e+06 1.13721e+08 1.07157e+07 24859 5.6011e+07 0 0.151929 0.991555 0.816316 1.12761e+08 0.00443101 2.47475e+07 1.45502e+07 2.51252e+07 306 2.52165e+07 1.85252e+07 0.00353401 2.50067e+07 49.7912 0.015375 0.995119 0 50.3787 GTEX-ZG7Y-2226-SM-DO92I 1 B1 2 pieces, mainly from base, one contains seminal vesicle gland elements in one-half (delineated), the other has prostate glands (ensquared). Other aliquot is all stromal hyperplasia 5.7 Prostate Prostate 0002367 260 1033 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994676 200521 0.975515 0.995217 0.860285 22062 1 76 0.00193025 150 0 6.46185e+07 0.0242631 456788 6.49291e+07 4.09299e+06 22076 3.22092e+07 0 0.115229 0.995217 0.856171 6.46185e+07 0.00248715 1.40078e+07 5.14003e+06 1.41849e+07 170 1.4064e+07 1.13592e+07 0.00220855 1.41638e+07 50.1768 0.00703518 0.995757 0 50.3142 GTEX-ZG7Y-2326-SM-DO92L 1 B1 2 pieces, abundant adherent fat up to ~2mm; 3mm vessel sections, one with ~50-60% luminal atherosclerotic occlusion 6.2 Blood Vessel Artery - Coronary 0001621 262 1032 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994902 508342 0.977631 0.995792 0.842154 22665 1 76 0.00191092 207 0 8.67674e+07 0.022033 612401 8.7134e+07 5.31576e+06 22685 4.3248e+07 0 0.135477 0.995792 0.83861 8.67674e+07 0.00241027 1.90431e+07 7.15475e+06 1.92824e+07 230 1.92459e+07 1.57561e+07 0.00216038 1.91529e+07 49.8789 0.00702826 0.996683 0 50.3121 GTEX-ZG7Y-2426-SM-DO11H 1 B1 2 pieces, excellent specimens, 98% glandular elements 7.7 Salivary Gland Minor Salivary Gland 0006330 268 1026 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.98736 226777 0.974476 0.991206 0.808158 23683 1 76 0.00272062 175 0 7.32051e+07 0.0243944 429676 7.38545e+07 7.0999e+06 23707 3.63448e+07 0 0.166318 0.991206 0.801052 7.32051e+07 0.00485222 1.63626e+07 1.01281e+07 1.65638e+07 166 1.66733e+07 1.32586e+07 0.00378228 1.65107e+07 49.755 0.00581787 0.995053 0 50.3055 GTEX-ZGAY-0002-SM-4YUV3 C1 Blood Whole Blood 0013756 133 BP-36403 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/25/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZGAY-0002-SM-53UB9 C1 Blood Whole Blood 0013756 133 BP-36403 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/25/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZGAY-0002-SM-6UH3J C1 Blood Whole Blood 0013756 133 BP-36403 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/25/2013 LCSET-6032 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZGAY-0006-SM-4WWAQ C1 8.1 Blood Whole Blood 0013756 133 BP-36404 RNA isolation_PAXgene Blood RNA (Manual) 02/25/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.98943 2.21041e+06 0.915478 0.991935 0.730838 21777 1 76 0.00295173 165 0 9.87659e+07 0.0839625 283761 9.95689e+07 8.70523e+06 21797 4.91148e+07 0 0.18464 0.991935 0.724944 9.87659e+07 0.00361232 2.0566e+07 8.28658e+07 2.07952e+07 190 2.08492e+07 1.71736e+07 0.00328119 2.08038e+07 49.9455 0.0028499 0.994441 0 50.277 GTEX-ZGAY-0226-SM-4WWAL 1 C1 2 pieces; no abnormalities 7.8 Heart Heart - Atrial Appendage 0006631 147 1437 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990849 398395 0.976403 0.993386 0.836068 23211 1 76 0.00271318 371 0 1.06554e+08 0.0233242 1.37609e+06 1.07263e+08 8.98169e+06 23236 5.30339e+07 0 0.140335 0.993386 0.830539 1.06554e+08 0.00321161 2.31659e+07 1.87356e+07 2.34025e+07 331 2.33677e+07 1.6748e+07 0.00296175 2.3472e+07 50.1114 0.0128291 0.995924 0 50.254 GTEX-ZGAY-0326-SM-57WF5 1 C1 2 pieces; minimal ischemic changes 8.6 Heart Heart - Left Ventricle 0006566 149 1435 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.990074 331550 0.985407 0.992852 0.863814 20923 1 76 0.00273459 269 0 1.00956e+08 0.0142955 1.75095e+06 1.01682e+08 1.4574e+07 20935 5.02232e+07 0 0.121594 0.992852 0.857639 1.00956e+08 0.00417544 2.20089e+07 2.76866e+07 2.19255e+07 310 2.17945e+07 1.6626e+07 0.003453 2.23604e+07 50.6408 0.0172198 0.995631 0 49.9051 GTEX-ZGAY-0426-SM-4WWAM 1 C1 2 pieces, one with ~60% luminal atherosclerotic occlusion, encircled; one with discontinuous adherent fat up to ~0.5mm, delineated 6 Blood Vessel Artery - Coronary 0001621 154 1432 BP-42743 RNA Extraction from Paxgene-derived Lysate Plate Based 08/27/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991333 346631 0.973802 0.993654 0.836824 22261 1 76 0.00249812 157 0 7.23593e+07 0.0259082 275367 7.28214e+07 6.08049e+06 22283 3.59769e+07 0 0.136978 0.993654 0.831514 7.23593e+07 0.00309348 1.56206e+07 5.45042e+06 1.58072e+07 171 1.57484e+07 1.31286e+07 0.00279511 1.58423e+07 50.1485 0.0037814 0.995976 0 50.2969 GTEX-ZGAY-0526-SM-4WWBB 0 C1 6 pieces, minimal adherent dermal fat. Squamous epithelium is ~7-90 microns thick 8 Skin Skin - Sun Exposed (Lower leg) 0004264 229 1358 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988545 543162 0.970216 0.991775 0.800549 23806 1 76 0.0027207 330 0 9.95446e+07 0.0295297 496687 1.0037e+08 8.76525e+06 23836 4.94725e+07 0 0.169667 0.991775 0.793964 9.95446e+07 0.00373339 2.15321e+07 1.32524e+07 2.16168e+07 261 2.16892e+07 1.65572e+07 0.0032254 2.17714e+07 50.0946 0.00494855 0.995005 0 50.0982 GTEX-ZGAY-0626-SM-DO92E 0 C1 2 pieces, ~10-15% fibrous tissue, rep. areas delineated 7.2 Adipose Tissue Adipose - Subcutaneous 0002190 231 1356 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995188 458317 0.976294 0.995782 0.81511 23383 1 76 0.00206968 282 0 1.02188e+08 0.0234099 482891 1.02621e+08 6.06519e+06 23412 5.09585e+07 0 0.161184 0.995782 0.811673 1.02188e+08 0.0024658 2.24536e+07 9.61426e+06 2.26672e+07 295 2.2667e+07 1.78921e+07 0.00226762 2.25102e+07 49.8264 0.00470556 0.996376 0 50.2367 GTEX-ZGAY-0726-SM-DO91O 0 C1 2 pieces trace interstitial fat, good specimens 8.4 Muscle Muscle - Skeletal 0011907 234 1353 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995483 582405 0.98535 0.996073 0.878088 20104 1 76 0.00193945 385 0 1.12965e+08 0.0144122 1.09498e+06 1.1341e+08 6.45806e+06 20116 5.63359e+07 0 0.107262 0.996073 0.87464 1.12965e+08 0.00220625 2.46942e+07 1.68236e+07 2.50065e+07 331 2.50313e+07 2.2442e+07 0.00207277 2.47304e+07 49.6976 0.00965502 0.996664 0 50.3142 GTEX-ZGAY-0826-SM-4WWEP 0 C1 2 pieces, minimal adherent fat, good specimens 6 Nerve Nerve - Tibial 0001323 235 1353 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.981513 371521 0.96317 0.984194 0.765961 26107 1 76 0.00297283 284 0 1.09262e+08 0.0365933 601314 1.11016e+08 1.4165e+07 26154 5.42867e+07 0 0.197209 0.984194 0.753854 1.09262e+08 0.00432761 2.38394e+07 1.44796e+07 2.3994e+07 327 2.3976e+07 1.57494e+07 0.00364837 2.4135e+07 50.1652 0.00541644 0.986875 0 50.1616 GTEX-ZGAY-0926-SM-4WWBQ 0 C1 2 pieces minimal adherent fibrous tissue/minute vessel, good specimens 8.4 Blood Vessel Artery - Tibial 0007610 236 1353 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.99179 292577 0.97026 0.993844 0.831341 20151 1 76 0.00247461 123 0 5.73811e+07 0.0293625 168992 5.77365e+07 4.69997e+06 20162 2.85583e+07 0 0.138919 0.993844 0.826223 5.73811e+07 0.00294888 1.21951e+07 5.11438e+06 1.23162e+07 128 1.22822e+07 1.13939e+07 0.00271125 1.23427e+07 50.1228 0.00292695 0.995898 0 50.2469 GTEX-ZGAY-1026-SM-4WWBR 1 C1 2 pieces, 2mm colloid cyst, encircled. Mild generalized goiter with regressive changes. 6.8 Thyroid Thyroid 0002046 256 1334 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990553 318582 0.961807 0.992925 0.743202 23791 1 76 0.00261677 129 0 6.31557e+07 0.0379351 195203 6.36057e+07 5.3679e+06 23818 3.14151e+07 0 0.218605 0.992925 0.737943 6.31557e+07 0.00319306 1.37413e+07 7.75438e+06 1.38019e+07 137 1.38134e+07 9.88534e+06 0.00290422 1.38753e+07 50.1118 0.00306895 0.995296 0 50.11 GTEX-ZGAY-1126-SM-4WWBS 1 C1 6 pieces, squamous mucosa 0.25mm; patchy chronic esophagitis, foci delineated; focal submucosal glands ensquared 8.9 Esophagus Esophagus - Mucosa 0006920 258 1332 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.98875 706575 0.965314 0.991083 0.821478 22986 1 76 0.0026146 212 0 9.64477e+07 0.0343526 389018 9.73154e+07 8.3733e+06 23009 4.80064e+07 0 0.143835 0.991083 0.814154 9.64477e+07 0.00309726 2.14504e+07 2.65472e+07 2.15875e+07 255 2.16263e+07 1.92694e+07 0.00285536 2.16375e+07 50.0129 0.0039975 0.993417 0 50.1594 GTEX-ZGAY-1226-SM-4YCF4 1 C1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 260 1331 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.980556 423908 0.974301 0.985278 0.834583 24024 1 76 0.00242095 287 0 9.39472e+07 0.0253574 315413 9.53509e+07 1.613e+07 24051 4.66344e+07 0 0.139718 0.985278 0.822297 9.39472e+07 0.00423905 2.06305e+07 9.03978e+06 2.07926e+07 265 2.09105e+07 1.81186e+07 0.00332564 2.09365e+07 50.0311 0.00330792 0.990001 0 50.1957 GTEX-ZGAY-1226-SM-DO92W 1 C1 6 pieces, all muscularis, good specimens 8.2 Esophagus Esophagus - Muscularis 0004648 260 1331 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995639 631423 0.970291 0.99618 0.83181 23789 1 76 0.00190695 286 0 9.88525e+07 0.029367 324500 9.92316e+07 5.93649e+06 23814 4.92944e+07 0 0.138481 0.99618 0.828633 9.88525e+07 0.00219249 2.16981e+07 1.25338e+07 2.18977e+07 297 2.18857e+07 1.94779e+07 0.00204964 2.1766e+07 49.8629 0.00327013 0.996722 0 50.2289 GTEX-ZGAY-1326-SM-5S2NS 1 C1 2 pieces, a few vessels, rep ones delineated 6.6 Adipose Tissue Adipose - Visceral (Omentum) 0010414 261 1336 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993095 176789 0.976151 0.994511 0.835626 22716 1 76 0.00187377 167 0 7.31804e+07 0.0235374 523406 7.35843e+07 5.04684e+06 22731 3.64281e+07 0 0.140525 0.994511 0.831039 7.31804e+07 0.00260485 1.59896e+07 7.53627e+06 1.62419e+07 197 1.61018e+07 1.18392e+07 0.00223879 1.62299e+07 50.1982 0.00711301 0.995927 0 50.3914 GTEX-ZGAY-1526-SM-4WWEO 1 C1 6 pieces, a few with trace adherent fibrous tissue (delineated); good specimens. 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 265 1333 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.989457 315533 0.974443 0.991886 0.844904 22782 1 76 0.00260061 283 0 9.34331e+07 0.0252373 508182 9.41974e+07 1.19503e+07 22801 4.64755e+07 0 0.129539 0.991886 0.838048 9.34331e+07 0.00410175 2.02325e+07 1.04149e+07 2.02022e+07 268 2.02009e+07 1.74577e+07 0.00334934 2.04518e+07 50.3086 0.00539486 0.994316 0 49.9626 GTEX-ZGAY-1526-SM-DO11O 1 C1 6 pieces, a few with trace adherent fibrous tissue (delineated); good specimens. 8.1 Esophagus Esophagus - Gastroesophageal Junction 0004550 265 1333 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988122 466827 0.977368 0.992035 0.85432 23680 1 76 0.00239294 390 0 1.25784e+08 0.022292 643993 1.26794e+08 1.2651e+07 23702 6.24997e+07 0 0.123047 0.992035 0.847516 1.25784e+08 0.00441014 2.70651e+07 1.10687e+07 2.75091e+07 331 2.76198e+07 2.43292e+07 0.00339756 2.73911e+07 49.7921 0.00507906 0.995948 0 50.4067 GTEX-ZGAY-1626-SM-DNZZ3 1 C1 6 pieces, mucosa is generally well prserved with a few ares approaching grade 2 with sloughing (delineated)--mucosa is ~20-30% thickness 6.6 Stomach Stomach 0000945 267 1332 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985876 247549 0.982162 0.989861 0.862031 23332 1 76 0.0024112 338 0 9.89407e+07 0.0173776 886020 9.99542e+07 9.62935e+06 23353 4.91461e+07 0 0.120132 0.989861 0.85329 9.89407e+07 0.00470157 2.26597e+07 6.99126e+07 2.29031e+07 307 2.30417e+07 2.43886e+07 0.00355178 2.28876e+07 49.8322 0.00886426 0.993845 0 50.2671 GTEX-ZGAY-1726-SM-DO91P 1 C1 2 pieces, generalized fibrocystic changes 6.3 Breast Breast - Mammary Tissue 0008367 269 1330 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994813 268668 0.971287 0.995375 0.802647 24797 1 76 0.00205501 208 0 8.64069e+07 0.0281726 283167 8.68083e+07 4.75092e+06 24831 4.30701e+07 0 0.16864 0.995375 0.798935 8.64069e+07 0.00257192 1.89574e+07 8.11079e+06 1.9076e+07 210 1.90289e+07 1.60832e+07 0.00231332 1.90554e+07 50.0348 0.00326198 0.995938 0 50.1559 GTEX-ZGAY-1826-SM-DO91Q 0 C1 6 pieces, minimal adherent dermal fat, delineated. Squamous epithelium is ~40-50 microns thick 7.3 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 271 1329 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994441 346805 0.971804 0.995086 0.79502 24028 1 76 0.00191427 285 0 9.25601e+07 0.0279463 519684 9.30172e+07 4.85133e+06 24056 4.6155e+07 0 0.176784 0.995086 0.791113 9.25601e+07 0.00258723 2.03519e+07 8.74786e+06 2.04449e+07 267 2.04128e+07 1.56303e+07 0.00225053 2.04426e+07 50.0366 0.00558697 0.995732 0 50.1141 GTEX-ZGAY-2126-SM-4YCFB 1 C1 6 pieces, mucosa is generally well-preserved, ~10%-15% thickness 6.7 Colon Colon - Transverse 0001157 280 1321 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.988434 299827 0.975429 0.992109 0.826314 23591 1 76 0.00268703 176 0 7.33459e+07 0.0237799 593704 7.39293e+07 1.13808e+07 23612 3.64349e+07 0 0.149114 0.992109 0.819794 7.33459e+07 0.00439782 1.61613e+07 7.88637e+06 1.62112e+07 176 1.62507e+07 1.21354e+07 0.00353926 1.63685e+07 50.1806 0.0080307 0.995783 0 50.0771 GTEX-ZGAY-2226-SM-4YCCX 0 C1 6 pieces, squamous mucosa is ~5-6% thickness. 6.6 Vagina Vagina 0000996 283 1319 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.987862 314340 0.972052 0.991846 0.821614 24107 1 76 0.00242824 216 0 8.58451e+07 0.0276685 310304 8.65508e+07 1.25947e+07 24131 4.2654e+07 0 0.150439 0.991846 0.814915 8.58451e+07 0.00412569 1.87404e+07 8.46193e+06 1.88931e+07 215 1.89324e+07 1.52674e+07 0.00327356 1.90234e+07 50.1199 0.00358522 0.99583 0 50.2029 GTEX-ZLFU-0004-SM-4YUV4 B1 Blood Whole Blood 0013756 -148 BP-36545 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZLFU-0004-SM-53UBZ B1 Blood Whole Blood 0013756 -148 BP-36545 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZLFU-0004-SM-7DRPW B1 Blood Whole Blood 0013756 -148 BP-36545 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 LCSET-6341 01/12/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZLFU-0126-SM-5EQMN 1 B1 2 pieces, both with intimal plaques and perivascular fat up to 1.5 mm thick; focal adventitial lymphoid deposits [chronic inflammation]. 6.5 Blood Vessel Artery - Coronary 0001621 90 1397 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.989172 248319 0.980205 0.9916 0.880966 22144 1 76 0.00224583 215 0 8.86438e+07 0.0192011 518173 8.93947e+07 1.25249e+07 22152 4.40774e+07 0 0.0992389 0.9916 0.873566 8.86438e+07 0.0033523 1.91146e+07 8.20555e+06 1.92046e+07 235 1.91268e+07 1.946e+07 0.00279771 1.94026e+07 50.3579 0.00579646 0.994027 0 50.1173 GTEX-ZLFU-0226-SM-4WWFH 1 B1 2 pieces. Large nuclei c/w hypertrophy 5.9 Heart Heart - Left Ventricle 0006566 91 1396 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.990344 310404 0.983616 0.992344 0.865785 20744 1 76 0.00281299 267 0 9.44098e+07 0.0161304 2.65177e+06 9.51382e+07 1.13211e+07 20757 4.69869e+07 0 0.117831 0.992344 0.859157 9.44098e+07 0.0038889 2.0792e+07 2.02367e+07 2.05414e+07 282 2.0405e+07 1.47421e+07 0.00334986 2.10954e+07 50.8318 0.0278728 0.994345 0 49.6969 GTEX-ZLFU-0326-SM-4WWBK 1 B1 2 pieces 7.3 Heart Heart - Atrial Appendage 0006631 92 1395 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989685 201010 0.984116 0.992602 0.852673 19824 1 76 0.00305533 264 0 7.54473e+07 0.0157472 2.65859e+06 7.60097e+07 6.51386e+06 19832 3.7543e+07 0 0.131443 0.992602 0.846365 7.54473e+07 0.00351429 1.59413e+07 2.18502e+07 1.63233e+07 256 1.6037e+07 7.68659e+06 0.00328413 1.6438e+07 50.6173 0.034977 0.995519 0 50.592 GTEX-ZLFU-0526-SM-4WWBN 1 B1 2 pieces 6.8 Spleen Spleen 0002106 105 1382 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.985094 783221 0.944785 0.988661 0.724957 25071 1 76 0.00349324 153 0 8.31883e+07 0.0533751 330948 8.41425e+07 7.37889e+06 25110 4.12332e+07 0 0.219828 0.988661 0.716736 8.31883e+07 0.00418612 1.79287e+07 2.70053e+07 1.80679e+07 169 1.81503e+07 1.20967e+07 0.00383843 1.81433e+07 49.9902 0.00393319 0.992228 0 50.1933 GTEX-ZLFU-0626-SM-4WWBO 1 B1 2 pieces 5.7 Thyroid Thyroid 0002046 108 1379 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.987664 422478 0.957952 0.990913 0.700514 24642 1 76 0.00276599 150 0 8.15357e+07 0.0418256 351529 8.22834e+07 6.84955e+06 24687 4.05084e+07 0 0.257438 0.990913 0.694148 8.15357e+07 0.00343723 1.76817e+07 1.1889e+07 1.77215e+07 172 1.77557e+07 1.04393e+07 0.00310051 1.78991e+07 50.201 0.00427218 0.994163 0 50.0562 GTEX-ZLFU-0726-SM-57WF6 1 B1 2 pieces. PanIN 1a. Scattered foci of fibrosis and atrophy. 7.4 Pancreas Pancreas 0001150 111 1376 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988629 335422 0.978005 0.991625 0.856945 20955 1 76 0.00284203 102 0 7.26825e+07 0.0216173 176597 7.32964e+07 1.01947e+07 20970 3.61331e+07 0 0.121059 0.991625 0.849768 7.26825e+07 0.00472636 1.67291e+07 2.37527e+07 1.68628e+07 111 1.68495e+07 2.18217e+07 0.00378135 1.69578e+07 50.1602 0.00240935 0.99462 0 50.1991 GTEX-ZLFU-0826-SM-4WWBP 1 B1 2 pieces. Moderate medullary hyperplasia 9.4 Adrenal Gland Adrenal Gland 0002369 126 1361 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990379 537087 0.972454 0.993383 0.828545 23039 1 76 0.00278538 274 0 9.99118e+07 0.0271878 1.62099e+06 1.00577e+08 8.86891e+06 23065 4.96979e+07 0 0.143909 0.993383 0.823063 9.99118e+07 0.00323766 2.19494e+07 1.70972e+07 2.21828e+07 284 2.21757e+07 1.70372e+07 0.00301084 2.22407e+07 50.0732 0.0161168 0.996387 0 50.2645 GTEX-ZLFU-0926-SM-5P9F8 1 B1 6 pieces. Characteristic lesions of diabetic glomerulosclerosis. Unusually well preserved tubules 6.4 Kidney Kidney - Cortex 0001225 128 1359 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4914 03/27/2014 TruSeq.v1 RNASEQ 0.989624 316433 0.970827 0.989673 0.818451 25625 1 76 0.00351275 272 0 1.05658e+08 0.0280321 906130 1.06761e+08 3.72550e+06 25659 5.24792e+07 0 0.152376 0.989673 0.809999 1.05658e+08 0.00438377 2.31884e+07 1.25649e+07 2.33816e+07 329 2.32005e+07 1.60154e+07 0.00394824 2.33744e+07 50.1868 0.00848748 0.989722 0 50.2075 GTEX-ZLFU-1026-SM-5EQMZ 1 B1 6 pieces. Up to 30% fibrous stroma. 7.1 Esophagus Esophagus - Muscularis 0004648 132 1355 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.992888 216992 0.978352 0.994489 0.842445 21614 1 76 0.00205761 145 0 6.44773e+07 0.0213008 413011 6.48346e+07 7.49245e+06 21629 3.21147e+07 0 0.135907 0.994489 0.837802 6.44773e+07 0.00294601 1.40827e+07 5.77552e+06 1.41226e+07 155 1.40804e+07 1.19006e+07 0.0025011 1.42231e+07 50.2519 0.00637023 0.996091 0 50.0707 GTEX-ZLFU-1126-SM-DO11K 0 B1 6 pieces. Well dissected. 9.2 Esophagus Esophagus - Mucosa 0006920 134 1353 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.987269 473867 0.977763 0.991179 0.843299 22845 1 76 0.00249309 283 0 1.0373e+08 0.0216334 447347 1.04653e+08 1.00627e+07 22862 5.15259e+07 0 0.134465 0.991179 0.83586 1.0373e+08 0.00470821 2.32533e+07 1.52365e+07 2.34426e+07 272 2.36066e+07 2.25765e+07 0.00359628 2.34652e+07 49.8498 0.00427457 0.995088 0 50.2027 GTEX-ZLFU-1326-SM-4WWET 1 B1 6 pieces. Deep dilated mucosal glands 7 Stomach Stomach 0000945 139 1348 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.979969 540540 0.967901 0.982518 0.829132 22957 1 76 0.00278112 355 0 9.8615e+07 0.0314609 1.24327e+06 1.0037e+08 1.36616e+07 22980 4.90069e+07 0 0.13877 0.982518 0.814637 9.8615e+07 0.00396681 2.22364e+07 1.10304e+08 2.2585e+07 303 2.26007e+07 2.37281e+07 0.00337242 2.24706e+07 49.8557 0.0123869 0.985067 0 50.3888 GTEX-ZLFU-1326-SM-DO11R 1 B1 6 pieces. Deep dilated mucosal glands 7 Stomach Stomach 0000945 139 1348 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.980992 259599 0.980556 0.985103 0.847206 23079 1 76 0.00240176 449 0 1.05106e+08 0.0188115 1.32109e+06 1.06695e+08 1.04778e+07 23106 5.21896e+07 0 0.133349 0.985103 0.834585 1.05106e+08 0.0045939 2.39996e+07 1.04463e+08 2.43035e+07 344 2.44022e+07 2.64311e+07 0.00349326 2.43043e+07 49.8995 0.0123819 0.989214 0 50.3146 GTEX-ZLFU-1426-SM-4WWEU 0 B1 6 pieces. 2 pieces have mucosal remnants [not target] 7.2 Colon Colon - Sigmoid 0001159 145 1342 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986377 329774 0.969233 0.988949 0.859609 21440 1 76 0.00258059 160 0 7.1293e+07 0.0304635 516222 7.20896e+07 9.02343e+06 21449 3.54527e+07 0 0.109624 0.988949 0.85011 7.1293e+07 0.00421332 1.53434e+07 1.32107e+07 1.53795e+07 168 1.53591e+07 1.39288e+07 0.00339483 1.55439e+07 50.299 0.00716084 0.991522 0 50.0588 GTEX-ZLFU-1526-SM-4WWBT 0 B1 6 pieces. All with abundant mucosal lymphoid tissue [Peyer patches]. All also have muscularis propria (not target). 8 Small Intestine Small Intestine - Terminal Ileum 0001211 154 1333 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988512 673334 0.938356 0.991085 0.706981 24631 1 76 0.00302027 127 0 6.69167e+07 0.061043 357790 6.75186e+07 5.61977e+06 24662 3.32715e+07 0 0.231375 0.991085 0.700678 6.69167e+07 0.00368304 1.42729e+07 2.31204e+07 1.44006e+07 137 1.44337e+07 9.55381e+06 0.0033508 1.44191e+07 49.9747 0.00529913 0.993658 0 50.2228 GTEX-ZLFU-1726-SM-4WWBU 1 B1 2 pieces 5.9 Prostate Prostate 0002367 161 1326 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.98977 297595 0.965644 0.992098 0.786085 24390 1 76 0.00268685 146 0 6.76071e+07 0.0339949 379916 6.81456e+07 5.59579e+06 24413 3.36126e+07 0 0.179559 0.992098 0.779873 6.76071e+07 0.00335854 1.46827e+07 8.28991e+06 1.47881e+07 154 1.47574e+07 1.11804e+07 0.00302191 1.48695e+07 50.1891 0.00557506 0.994425 0 50.1789 GTEX-ZLFU-1826-SM-4WWBV 1 B1 6 pieces. Well trimmed 6.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 164 1323 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989757 289227 0.966279 0.992194 0.825089 21782 1 76 0.00272161 143 0 6.08294e+07 0.0335278 411735 6.13079e+07 5.14736e+06 21799 3.02541e+07 0 0.14119 0.992194 0.818648 6.08294e+07 0.00343199 1.3199e+07 1.17806e+07 1.33547e+07 152 1.33275e+07 9.99423e+06 0.00307593 1.33747e+07 50.0884 0.00671585 0.994631 0 50.2933 GTEX-ZLFU-2026-SM-4WWG2 1 B1 2 pieces, fragmented; reduced spermatogenesis 6.3 Testis Testis 0000473 169 1318 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986953 378687 0.950399 0.989004 0.758739 31928 1 76 0.00289031 274 0 9.86157e+07 0.0493653 1.47914e+06 9.97121e+07 1.23187e+07 31990 4.9055e+07 0 0.191661 0.989004 0.750396 9.86157e+07 0.00411097 2.1338e+07 1.35445e+07 2.13571e+07 266 2.13689e+07 1.43861e+07 0.00349938 2.1514e+07 50.1692 0.0148341 0.991055 0 50.0223 GTEX-ZLFU-2126-SM-4WWEV 1 B1 2 pieces. One overly large piece with central holes. No ducts. Adipose tissue with some fibrous bands 7.5 Breast Breast - Mammary Tissue 0008367 182 1305 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.986946 297175 0.979366 0.989328 0.849491 21519 1 76 0.00268814 208 0 8.06853e+07 0.0203653 480934 8.15556e+07 1.03201e+07 21536 4.01296e+07 0 0.129875 0.989328 0.840425 8.06853e+07 0.00413787 1.78097e+07 9.63416e+06 1.78871e+07 208 1.78765e+07 1.50601e+07 0.00341126 1.80094e+07 50.1852 0.00589701 0.991711 0 50.1084 GTEX-ZLFU-2126-SM-DO931 1 B1 2 pieces. One overly large piece with central holes. No ducts. Adipose tissue with some fibrous bands 7.5 Breast Breast - Mammary Tissue 0008367 182 1305 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994908 580840 0.980031 0.995636 0.85139 21569 1 76 0.00193675 215 0 9.0004e+07 0.0196834 544159 9.03985e+07 4.9078e+06 21587 4.48699e+07 0 0.128641 0.995636 0.847674 9.0004e+07 0.00239495 1.98779e+07 9.59678e+06 2.00758e+07 249 2.00602e+07 1.77321e+07 0.00216568 1.99593e+07 49.8739 0.00601956 0.996364 0 50.2476 GTEX-ZLFU-2226-SM-EXUS7 0 B1 2 pieces. 5 small salivary glands (marked) around 2 mm in diameter attached to huge pieces of lip epithelium and stroma 8.4 Salivary Gland Minor Salivary Gland 0006330 183 1304 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10976,LCSET-11231 06/05/2017 TruSeq.v1 RNASEQ 0.990076 611349 0.98268 0.9918 0.859333 20359 1 76 0.00235704 155 0 7.02491e+07 0.0170539 362838 7.08299e+07 2.30496e+06 20368 3.49527e+07 0 0.123346 0.9918 0.852287 7.02491e+07 0.00293378 1.59378e+07 1.08402e+07 1.60201e+07 164 1.60905e+07 1.51357e+07 0.00264491 1.59843e+07 49.8344 0.00512266 0.993524 0 50.1287 GTEX-ZLFU-2426-SM-DO92Q 1 B1 3 pieces, 2 with extensive medial calcification (Monckeberg sclerosis) 6.2 Blood Vessel Artery - Tibial 0007610 212 1275 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995561 414900 0.972651 0.996029 0.836477 21887 1 76 0.00198562 274 0 9.06017e+07 0.0270094 318262 9.09629e+07 5.49827e+06 21908 4.51736e+07 0 0.136174 0.996029 0.833156 9.06017e+07 0.00231178 1.94518e+07 7.63652e+06 1.95815e+07 258 1.95157e+07 1.71453e+07 0.00214862 1.95606e+07 50.0575 0.00349881 0.996497 0 50.166 GTEX-ZLFU-2526-SM-DO91K 1 B1 2 pieces. Focal atrophy 8.6 Muscle Muscle - Skeletal 0011907 213 1274 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995567 610592 0.983947 0.996189 0.878546 19908 1 76 0.0018598 283 0 1.01985e+08 0.0157814 1.23876e+06 1.02375e+08 6.0941e+06 19922 5.08518e+07 0 0.105401 0.996189 0.875198 1.01985e+08 0.00216959 2.17689e+07 1.27558e+07 2.19842e+07 312 2.20173e+07 2.19005e+07 0.0020146 2.17913e+07 49.742 0.0121002 0.99681 0 50.246 GTEX-ZLFU-2626-SM-DO91L 1 B1 2 pieces, overly large with central holes 8.1 Adipose Tissue Adipose - Subcutaneous 0002190 215 1272 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994447 442866 0.97857 0.995043 0.83258 22794 1 76 0.00194885 281 0 9.54568e+07 0.0210748 327247 9.59323e+07 5.00451e+06 22820 4.75968e+07 0 0.14599 0.995043 0.828453 9.54568e+07 0.00243202 2.10895e+07 7.80761e+06 2.12082e+07 285 2.12279e+07 1.88849e+07 0.00219029 2.11234e+07 49.8766 0.00341123 0.995639 0 50.1403 GTEX-ZLV1-0001-SM-4WWAO B1 9.9 Blood Cells - EBV-transformed lymphocytes EFO_0000572 1276 BP-39146 RNA isolation_Trizol Manual (Cell Pellet) 05/20/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.9897 1.00631e+06 0.956068 0.992435 0.817289 21354 1 76 0.00264603 178 0 8.47617e+07 0.0433387 640443 8.54078e+07 7.38116e+06 21375 4.21591e+07 0 0.138779 0.992435 0.811107 8.47617e+07 0.0030357 1.8493e+07 2.21145e+07 1.87124e+07 184 1.87716e+07 1.84985e+07 0.00284032 1.86622e+07 49.8539 0.00749865 0.99517 0 50.2949 GTEX-ZLV1-0003-SM-4YUVF B1 Blood Whole Blood 0013756 1276 BP-36546 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZLV1-0003-SM-53UAT B1 Blood Whole Blood 0013756 1276 BP-36546 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZLV1-0003-SM-7DRPD B1 Blood Whole Blood 0013756 1276 BP-36546 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 02/28/2013 LCSET-6341 01/18/2015 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZLV1-0005-SM-4WWAP B1 8.4 Blood Whole Blood 0013756 1276 BP-36595 RNA isolation_PAXgene Blood RNA (Manual) 03/01/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.984256 1.4642e+06 0.935689 0.986711 0.774661 17900 1 76 0.00295934 111 0 7.25021e+07 0.0633241 573777 7.34785e+07 6.04931e+06 17905 3.60223e+07 0 0.161028 0.986711 0.764367 7.25021e+07 0.00390649 1.56743e+07 8.26226e+07 1.58834e+07 126 1.58931e+07 1.54474e+07 0.00343173 1.58783e+07 49.9766 0.00780877 0.989167 0 50.3313 GTEX-ZLV1-0126-SM-4WWBZ 1 B1 2 pieces, marked atrophy/regressive changes 8.1 Thyroid Thyroid 0002046 1527 1072 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988685 564082 0.959585 0.990988 0.74924 24985 1 76 0.00327271 154 0 8.0519e+07 0.0379364 324040 8.12513e+07 6.29346e+06 25021 3.99591e+07 0 0.210346 0.990988 0.742488 8.0519e+07 0.00395701 1.76812e+07 1.70647e+07 1.77411e+07 165 1.7808e+07 1.27235e+07 0.00361407 1.78014e+07 49.9908 0.00398812 0.993292 0 50.0845 GTEX-ZLV1-0226-SM-4WWC1 1 B1 2 pieces, cortex and medulla (delineated). ~40% adherent/intermingled fat, rep areas delineated with dotted line 8.1 Adrenal Gland Adrenal Gland 0002369 1528 1071 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990803 474105 0.969962 0.993466 0.816724 22134 1 76 0.00256277 129 0 6.40879e+07 0.029723 1.20488e+06 6.45094e+07 5.16829e+06 22152 3.18724e+07 0 0.153239 0.993466 0.811387 6.40879e+07 0.00322518 1.41262e+07 1.00105e+07 1.42051e+07 150 1.42158e+07 1.08006e+07 0.00289309 1.42837e+07 50.1192 0.0186776 0.996129 0 50.1393 GTEX-ZLV1-0426-SM-4WWC2 1 B1 2 pieces, emphysematous changes 7.9 Lung Lung 0008952 1537 1062 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990679 395563 0.967597 0.993033 0.76547 24161 1 76 0.00261809 166 0 8.23236e+07 0.0320287 486783 8.29012e+07 6.88493e+06 24195 4.09488e+07 0 0.202128 0.993033 0.760137 8.23236e+07 0.00307787 1.81676e+07 9.34978e+06 1.82755e+07 193 1.82925e+07 1.27979e+07 0.00284743 1.83397e+07 50.0644 0.00587185 0.995388 0 50.1481 GTEX-ZLV1-0526-SM-4WWD4 1 B1 4 pieces, 2 include gastric cardiac mucosa (delineated), focal submucosal glands present (rep one encircled) 8.8 Esophagus Esophagus - Mucosa 0006920 1543 1056 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989333 443065 0.971869 0.992351 0.820559 21670 1 76 0.0026572 166 0 7.72542e+07 0.0278347 654603 7.78497e+07 6.58088e+06 21682 3.84265e+07 0 0.15131 0.992351 0.814282 7.72542e+07 0.00319205 1.72404e+07 1.46592e+07 1.73652e+07 171 1.74124e+07 1.51551e+07 0.00292381 1.74226e+07 50.0147 0.00840855 0.995368 0 50.1802 GTEX-ZLV1-0626-SM-4WWF6 1 B1 6 pieces, all muscularis, good specimens 7.2 Esophagus Esophagus - Muscularis 0004648 1547 1052 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988262 297064 0.972784 0.990264 0.842599 22095 1 76 0.0025519 213 0 7.77005e+07 0.0269385 838007 7.84644e+07 1.00867e+07 22111 3.86657e+07 0 0.130185 0.990264 0.834396 7.77005e+07 0.00381383 1.6888e+07 9.65906e+06 1.69158e+07 208 1.68766e+07 1.39105e+07 0.00318159 1.7076e+07 50.2937 0.0106801 0.992265 0 50.0411 GTEX-ZLV1-0826-SM-4WWEQ 1 B1 6 pieces, 3 with mucosa, rest denuded (? sectioning/embedding artifact), mucosa up to 1mm thick, well- preserved. 6.4 Stomach Stomach 0000945 1558 1041 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.98685 480760 0.969387 0.989677 0.816151 23692 1 76 0.00289868 315 0 9.76741e+07 0.0303526 2.8396e+06 9.86929e+07 1.3558e+07 23716 4.85592e+07 0 0.153236 0.989677 0.807726 9.76741e+07 0.00428706 2.17945e+07 5.04533e+07 2.19446e+07 315 2.19027e+07 1.43024e+07 0.00359089 2.20928e+07 50.216 0.0287721 0.992504 0 50.1716 GTEX-ZLV1-0826-SM-DO11P 1 B1 6 pieces, 3 with mucosa, rest denuded (? sectioning/embedding artifact), mucosa up to 1mm thick, well- preserved. 6.4 Stomach Stomach 0000945 1558 1041 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985599 416362 0.978852 0.989886 0.826728 24321 1 76 0.00251235 419 0 1.36772e+08 0.0208627 3.82687e+06 1.38169e+08 1.34664e+07 24350 6.79343e+07 0 0.152124 0.989886 0.818367 1.36772e+08 0.00487003 3.06374e+07 6.28053e+07 3.10186e+07 371 3.1207e+07 2.1805e+07 0.00368608 3.09609e+07 49.8021 0.027697 0.994173 0 50.3091 GTEX-ZLV1-0926-SM-5S2MR 1 B1 2 pieces, abundant small vessels intimately intermingled with fat 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 1561 1038 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.993575 223030 0.977714 0.995062 0.845852 21458 1 76 0.00173966 163 0 6.67608e+07 0.0220036 720890 6.70921e+07 4.31758e+06 21470 3.32371e+07 0 0.131861 0.995062 0.841676 6.67608e+07 0.00257928 1.46373e+07 6.80528e+06 1.47971e+07 178 1.46959e+07 1.11735e+07 0.00215884 1.48371e+07 50.2391 0.0107448 0.996549 0 50.2714 GTEX-ZLV1-1126-SM-4WWBW 1 B1 4 pieces, well preserved mucosa, lymphoid aggregates are ~5% total, rep ones delineated 7.1 Small Intestine Small Intestine - Terminal Ileum 0001211 1574 1025 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989705 418096 0.972275 0.991915 0.798267 24011 1 76 0.00293274 222 0 8.86837e+07 0.0269944 837474 8.94065e+07 7.18879e+06 24044 4.4116e+07 0 0.174007 0.991915 0.791814 8.86837e+07 0.00346907 1.9681e+07 1.21822e+07 1.98929e+07 228 1.98757e+07 1.4477e+07 0.00320031 1.98823e+07 50.0082 0.00936703 0.994126 0 50.2677 GTEX-ZLV1-1226-SM-4WWBX 1 B1 4 pieces, well preserved, mucosa is ~0.3mm thick, ~10% thickness 6.7 Colon Colon - Transverse 0001157 1579 1020 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990542 479989 0.969109 0.992879 0.786818 25224 1 76 0.00298354 382 0 1.18702e+08 0.0298006 3.1691e+06 1.19553e+08 9.53549e+06 25268 5.90151e+07 0 0.182291 0.992879 0.781215 1.18702e+08 0.00344361 2.62e+07 1.79501e+07 2.6458e+07 360 2.63602e+07 1.57301e+07 0.00321303 2.65561e+07 50.1851 0.0265078 0.995216 0 50.245 GTEX-ZLV1-1326-SM-4WWER 1 B1 5 pieces, predominantly muscularis, focal connective tissue, good specimens 7.8 Colon Colon - Sigmoid 0001159 1587 1012 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.989045 308427 0.975209 0.991152 0.852897 22707 1 76 0.00249495 214 0 8.51423e+07 0.0244716 721635 8.59024e+07 1.04246e+07 22728 4.23673e+07 0 0.122312 0.991152 0.84535 8.51423e+07 0.00388355 1.86064e+07 1.09408e+07 1.86048e+07 245 1.8606e+07 1.61256e+07 0.00318777 1.87808e+07 50.2338 0.00840064 0.993258 0 49.9978 GTEX-ZLV1-1326-SM-DO11Q 1 B1 5 pieces, predominantly muscularis, focal connective tissue, good specimens 7.8 Colon Colon - Sigmoid 0001159 1587 1012 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.98862 315688 0.979622 0.99248 0.862231 22728 1 76 0.00219754 284 0 1.00189e+08 0.0200424 841366 1.00948e+08 1.0133e+07 22749 4.9792e+07 0 0.117391 0.99248 0.855748 1.00189e+08 0.0042468 2.18408e+07 8.25446e+06 2.21115e+07 304 2.22193e+07 1.95607e+07 0.00321819 2.20834e+07 49.8465 0.00833464 0.996341 0 50.308 GTEX-ZLV1-1426-SM-4WWES 1 B1 2 pieces, atrophic duct lobular units delineated (rep). Focal secretory metaplasia, ensquared. Abundant fat, normal post-menopausal atrophy 6.7 Breast Breast - Mammary Tissue 0008367 1601 998 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4180 11/02/2013 TruSeq.v1 EXCLUDE 0.986591 255337 0.971058 0.989377 0.797867 24393 1 76 0.00277826 166 0 7.49949e+07 0.0283474 413673 7.58001e+07 9.90761e+06 24421 3.72696e+07 0 0.173192 0.989377 0.789391 7.49949e+07 0.0042111 1.65083e+07 8.58207e+06 1.65326e+07 172 1.65507e+07 1.28308e+07 0.00349267 1.669e+07 50.2095 0.00545742 0.992163 0 50.0367 GTEX-ZLV1-1426-SM-DO92Z 1 B1 2 pieces, atrophic duct lobular units delineated (rep). Focal secretory metaplasia, ensquared. Abundant fat, normal post-menopausal atrophy 6.7 Breast Breast - Mammary Tissue 0008367 1601 998 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.993454 694726 0.972007 0.994372 0.796415 25505 1 76 0.00206806 280 0 1.09389e+08 0.0273745 625768 1.10009e+08 6.20017e+06 25546 5.44961e+07 0 0.175592 0.994372 0.791933 1.09389e+08 0.00271208 2.40949e+07 1.106e+07 2.4248e+07 311 2.42552e+07 1.91251e+07 0.00238978 2.41805e+07 49.923 0.00568835 0.99529 0 50.1584 GTEX-ZLV1-1526-SM-4WWBC 0 B1 4 pieces. Squamous epithelium is ~50-60 microns thick 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1605 994 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4179 11/08/2013 TruSeq.v1 EXCLUDE 0.98928 368218 0.966965 0.992018 0.785224 22524 1 76 0.00259858 161 0 6.79214e+07 0.0328755 590718 6.84679e+07 5.55394e+06 22549 3.37646e+07 0 0.181741 0.992018 0.778957 6.79214e+07 0.00335493 1.48781e+07 1.10731e+07 1.49935e+07 163 1.50009e+07 1.03036e+07 0.00297571 1.50545e+07 50.0891 0.00862766 0.994756 0 50.1932 GTEX-ZLV1-1526-SM-DO91J 0 B1 4 pieces. Squamous epithelium is ~50-60 microns thick 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 1605 994 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994817 335010 0.968092 0.995374 0.785662 23020 1 76 0.00191819 220 0 8.11008e+07 0.0317545 862009 8.14778e+07 4.89894e+06 23051 4.04433e+07 0 0.18243 0.995374 0.782028 8.11008e+07 0.00229654 1.77684e+07 1.09427e+07 1.7904e+07 212 1.78544e+07 1.24359e+07 0.00210726 1.78628e+07 50.0119 0.0105797 0.99593 0 50.1901 GTEX-ZLV1-1826-SM-5FQU5 0 B1 2 pieces, ~10% fibrous/fascial tissue, rep foci delineated 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 1629 970 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.989318 293692 0.975631 0.992109 0.811402 22764 1 76 0.00223864 193 0 8.23113e+07 0.0240672 421678 8.2966e+07 1.0824e+07 22787 4.09179e+07 0 0.164228 0.992109 0.805 8.23113e+07 0.00382818 1.81448e+07 7.41847e+06 1.82436e+07 204 1.82262e+07 1.36746e+07 0.00303118 1.83827e+07 50.2137 0.00508254 0.9949 0 50.1358 GTEX-ZLV1-1926-SM-5FQSF 0 B1 2 pieces, foci of Monckeberg's sclerosis, rep foci delineated. Good clean specimens 7 Blood Vessel Artery - Tibial 0007610 1638 961 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4793 02/19/2014 TruSeq.v1 RNASEQ 0.985472 249604 0.974301 0.988586 0.827473 21632 1 76 0.00222552 170 0 7.75989e+07 0.0252686 417057 7.84949e+07 1.05832e+07 21649 3.85742e+07 0 0.146828 0.988586 0.818028 7.75989e+07 0.00352509 1.67681e+07 6.49629e+06 1.68555e+07 186 1.68937e+07 1.46266e+07 0.00287326 1.69616e+07 50.1003 0.00531318 0.991699 0 50.1299 GTEX-ZLV1-2026-SM-5EQMB 0 B1 2 pieces, adherent ~1mm nubbin/rim of fat on one, delineated but good specimens generally 6 Nerve Nerve - Tibial 0001323 1639 960 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4790 02/19/2014 TruSeq.v1 RNASEQ 0.990373 307133 0.970163 0.993072 0.786242 23203 1 76 0.00206592 170 0 7.14291e+07 0.0295725 372771 7.19274e+07 8.9193e+06 23231 3.55285e+07 0 0.183921 0.993072 0.780795 7.14291e+07 0.00322811 1.5698e+07 7.14095e+06 1.58099e+07 168 1.57965e+07 1.17219e+07 0.00264543 1.58987e+07 50.1613 0.0051826 0.995772 0 50.1776 GTEX-ZLV1-2126-SM-4WWD2 0 B1 2 pieces, ~20% interstitial fat, delineated 8.2 Muscle Muscle - Skeletal 0011907 1641 958 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.992239 367215 0.979725 0.99439 0.861096 21064 1 76 0.00243683 278 0 9.70606e+07 0.0200297 1.31897e+06 9.76082e+07 8.23554e+06 21079 4.83342e+07 0 0.118629 0.99439 0.856266 9.70606e+07 0.0028093 2.14236e+07 1.13478e+07 2.15659e+07 292 2.15092e+07 1.89356e+07 0.00262266 2.16735e+07 50.1903 0.0135129 0.996542 0 50.1655 GTEX-ZLWG-0001-SM-4YUVG B1 Blood Whole Blood 0013756 -245 BP-36596 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/01/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZLWG-0001-SM-53UB3 B1 Blood Whole Blood 0013756 -245 BP-36596 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/01/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZLWG-0001-SM-6WBS7 B1 Blood Whole Blood 0013756 -245 BP-36596 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/01/2013 LCSET-6056 09/20/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZLWG-0004-SM-4WWD5 B1 10 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -245 BP-39937 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990348 948538 0.960188 0.992738 0.825726 20198 1 76 0.00291558 147 0 6.71412e+07 0.0394 593581 6.76323e+07 5.65492e+06 20220 3.34012e+07 0 0.134462 0.992738 0.81973 6.71412e+07 0.00334549 1.46622e+07 1.60473e+07 1.48405e+07 140 1.48733e+07 1.5441e+07 0.00313002 1.47928e+07 49.8644 0.00877659 0.995127 0 50.3023 GTEX-ZLWG-0008-SM-4E3J4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 176 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.990693 891026 0.961191 0.993259 0.846506 20780 1 76 0.00243714 175 0 8.57852e+07 0.0384753 377412 8.63674e+07 9.3379e+06 20792 4.26872e+07 0 0.114686 0.993259 0.840799 8.57852e+07 0.00354894 1.87579e+07 2.79954e+07 1.89513e+07 175 1.90388e+07 2.15462e+07 0.00299161 1.88921e+07 49.8066 0.00436984 0.995825 0 50.2564 GTEX-ZLWG-0126-SM-4WWC5 1 B1 2 pieces, medullary hyperplasia 8.7 Adrenal Gland Adrenal Gland 0002369 80 1165 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990951 524080 0.977052 0.993468 0.835865 22992 1 76 0.00315449 271 0 9.9412e+07 0.0224045 1.61977e+06 1.00066e+08 8.65809e+06 23015 4.94629e+07 0 0.141187 0.993468 0.830405 9.9412e+07 0.00347612 2.16204e+07 1.95636e+07 2.1792e+07 267 2.1758e+07 1.71116e+07 0.0033149 2.18972e+07 50.1594 0.016187 0.995984 0 50.1976 GTEX-ZLWG-0226-SM-4WWC6 0 B1 6 pieces, intimal thickening 8 Blood Vessel Artery - Aorta 0001496 82 1163 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179,LCSET-4523 11/21/2013 TruSeq.v1 EXCLUDE 0.993351 303555 0.975309 0.994185 0.827195 22533 1 76 0.0153668 84 0 7.70158e+07 0.0237673 254582 7.74662e+07 3.29334e+07 22549 3.82968e+07 0 0.148114 0.994185 0.822385 7.70158e+07 0.00346185 1.66943e+07 1.04222e+07 1.66429e+07 72 1.6621e+07 1.42712e+07 0.00941929 1.68015e+07 50.27 0.00328636 0.995019 0 49.9229 GTEX-ZLWG-0326-SM-4WWC7 1 B1 2 pieces 7.2 Pancreas Pancreas 0001150 84 1161 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.99056 1.11813e+06 0.947028 0.993049 0.823677 21705 1 76 0.00297566 119 0 9.06843e+07 0.0527261 252185 9.13191e+07 7.57309e+06 21722 4.51319e+07 0 0.123352 0.993049 0.817951 9.06843e+07 0.00360125 2.00925e+07 5.62942e+07 2.04403e+07 133 2.04584e+07 2.55482e+07 0.00328767 2.03216e+07 49.8323 0.00276158 0.995537 0 50.4291 GTEX-ZLWG-0426-SM-4WWFA 0 B1 3 pieces, one piece includes capsule (preferred location is 5mm below capsule), some congestion 8 Spleen Spleen 0002106 85 1160 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.985631 637812 0.95719 0.98879 0.764282 25563 1 76 0.00368799 276 0 1.05928e+08 0.040357 433488 1.07129e+08 1.44972e+07 25599 5.25138e+07 0 0.192908 0.98879 0.755715 1.05928e+08 0.00503598 2.30639e+07 3.00357e+07 2.31295e+07 267 2.32397e+07 1.68786e+07 0.00435984 2.32824e+07 50.0459 0.00404642 0.99195 0 50.071 GTEX-ZLWG-0526-SM-4WWFB 0 B1 2 pieces, one piece includes ~10% fat and nerve 7.9 Thyroid Thyroid 0002046 90 1155 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987052 425981 0.969475 0.990002 0.798518 24484 1 76 0.00284286 276 0 1.02686e+08 0.0301927 347642 1.03723e+08 1.35812e+07 24513 5.10497e+07 0 0.170956 0.990002 0.790535 1.02686e+08 0.00424978 2.24103e+07 1.4843e+07 2.2493e+07 269 2.25375e+07 1.87876e+07 0.00354422 2.26523e+07 50.127 0.00335163 0.992953 0 50.0921 GTEX-ZLWG-0626-SM-4WWFR 0 B1 2 pieces, some emphysematous change, hemosiderin-laden macrophages 8.6 Lung Lung 0008952 95 1150 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.990389 319284 0.975878 0.992509 0.833173 24835 1 76 0.00291703 276 0 1.01101e+08 0.0235394 390043 1.01864e+08 1.28701e+07 24865 5.02884e+07 0 0.142706 0.992509 0.826931 1.01101e+08 0.00415234 2.24191e+07 1.11734e+07 2.24568e+07 275 2.24796e+07 1.9946e+07 0.00353336 2.26045e+07 50.1385 0.00382905 0.994628 0 50.0419 GTEX-ZLWG-0726-SM-5S2N4 1 B1 2 pieces, central defects in both (? poor fixation) 8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 97 1148 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 RNASEQ 0.994092 179567 0.978689 0.995246 0.836978 21567 1 76 0.00206859 158 0 6.82866e+07 0.0209473 432748 6.86128e+07 4.75952e+06 21582 3.40219e+07 0 0.141711 0.995246 0.832999 6.82866e+07 0.00280306 1.49069e+07 7.16802e+06 1.51309e+07 167 1.50126e+07 1.24213e+07 0.0024354 1.50997e+07 50.1445 0.0063071 0.996401 0 50.3727 GTEX-ZLWG-0726-SM-5S2NG 1 B1 2 pieces, central defects in both (? poor fixation) 8.4 Adipose Tissue Adipose - Visceral (Omentum) 0010414 97 1148 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4981,LCSET-4988 03/31/2014 TruSeq.v1 EXCLUDE 0.99334 289315 0.977718 0.994809 0.819195 21369 1 76 0.00207968 137 0 6.28168e+07 0.021897 363325 6.31446e+07 4.4127e+06 21384 3.12657e+07 0 0.158523 0.994809 0.814943 6.28168e+07 0.00308243 1.37555e+07 6.62655e+06 1.3951e+07 151 1.38617e+07 1.14263e+07 0.00258031 1.39341e+07 50.1302 0.00575386 0.99628 0 50.3527 GTEX-ZLWG-0826-SM-59888 0 B1 6 pieces, predominantly well trimmed with limited attached adipose tissue 7 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 99 1146 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4417 01/23/2014 TruSeq.v1 RNASEQ 0.986792 265266 0.970891 0.990822 0.78573 23977 1 76 0.00295106 165 0 7.64983e+07 0.0288737 494158 7.72069e+07 1.55824e+07 24012 3.80036e+07 0 0.185161 0.990822 0.778519 7.64983e+07 0.00651496 1.66107e+07 9.18849e+06 1.67388e+07 164 1.67825e+07 1.23999e+07 0.00472576 1.68548e+07 50.1075 0.00640044 0.994852 0 50.1921 GTEX-ZLWG-0926-SM-4WWC3 0 B1 2 pieces + fragments, corpora albicantia present 8.1 Ovary Ovary 0000992 103 1142 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991693 341862 0.971293 0.993878 0.79079 22622 1 76 0.00257304 147 0 7.42887e+07 0.028384 116180 7.47463e+07 5.94482e+06 22653 3.69834e+07 0 0.180503 0.993878 0.785948 7.42887e+07 0.00308775 1.63707e+07 9.77747e+06 1.64648e+07 159 1.64944e+07 1.41489e+07 0.00282983 1.65e+07 50.0085 0.00155432 0.996062 0 50.1434 GTEX-ZLWG-1026-SM-4WWC4 0 B1 2 pieces, microscopic endometrial stromal nodule 7.7 Uterus Uterus 0000995 106 1139 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.991819 389697 0.968345 0.993858 0.780574 23453 1 76 0.00265273 162 0 8.0109e+07 0.0313073 201216 8.06041e+07 6.37668e+06 23485 3.98703e+07 0 0.187771 0.993858 0.77578 8.0109e+07 0.00317448 1.74524e+07 8.84271e+06 1.7527e+07 171 1.75255e+07 1.41823e+07 0.00291307 1.76157e+07 50.1284 0.00249635 0.995897 0 50.1066 GTEX-ZLWG-1126-SM-4WWFQ 0 B1 6 pieces 8.8 Vagina Vagina 0000996 114 1131 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.989296 504925 0.976103 0.991394 0.822937 24398 1 76 0.00295489 280 0 1.05437e+08 0.0234148 437098 1.06352e+08 1.28168e+07 24419 5.24313e+07 0 0.153167 0.991394 0.815854 1.05437e+08 0.00420359 2.36291e+07 1.7406e+07 2.3639e+07 297 2.3662e+07 2.05374e+07 0.00357792 2.38214e+07 50.1679 0.0041099 0.993491 0 50.0105 GTEX-ZLWG-1226-SM-4WWFS 0 B1 6 pieces, well trimmed 8.8 Esophagus Esophagus - Muscularis 0004648 118 1127 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.988535 292765 0.976189 0.990801 0.836785 22726 1 76 0.00274536 215 0 8.75183e+07 0.0235004 531818 8.83308e+07 1.17124e+07 22743 4.35344e+07 0 0.139404 0.990801 0.829087 8.75183e+07 0.00404687 1.87156e+07 8.2644e+06 1.87349e+07 239 1.87347e+07 1.66356e+07 0.00339462 1.89048e+07 50.2259 0.00602075 0.993067 0 50.0258 GTEX-ZLWG-1326-SM-DNZYZ 0 B1 6 pieces 9.3 Esophagus Esophagus - Mucosa 0006920 120 1125 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986759 393731 0.977698 0.990446 0.830684 22272 1 76 0.00279926 283 0 9.95892e+07 0.021735 545199 1.0055e+08 1.02436e+07 22290 4.94825e+07 0 0.147014 0.990446 0.822749 9.95892e+07 0.004684 2.23017e+07 1.67126e+07 2.25276e+07 265 2.26679e+07 2.03036e+07 0.00373812 2.2502e+07 49.8163 0.00542218 0.994134 0 50.252 GTEX-ZLWG-1426-SM-DO11C 0 B1 6 pieces, no residual mucosa 7.2 Esophagus Esophagus - Gastroesophageal Junction 0004550 124 1121 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988349 370148 0.977138 0.992008 0.853889 23112 1 76 0.00258096 281 0 1.06275e+08 0.0225614 827062 1.07131e+08 9.75098e+06 23135 5.28126e+07 0 0.123249 0.992008 0.847065 1.06275e+08 0.00466032 2.27633e+07 9.50507e+06 2.31015e+07 308 2.31324e+07 1.97444e+07 0.0036168 2.30727e+07 49.9354 0.00772011 0.995668 0 50.3687 GTEX-ZLWG-1526-SM-DO12F 1 B1 6 pieces, well trimmed 6.6 Stomach Stomach 0000945 126 1119 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.982925 280278 0.98112 0.987089 0.853916 22951 1 76 0.00277523 336 0 9.73179e+07 0.0183665 656473 9.85908e+07 1.00935e+07 22975 4.83243e+07 0 0.127204 0.987089 0.842891 9.73179e+07 0.00506451 2.20478e+07 7.59053e+07 2.23045e+07 282 2.24314e+07 2.41615e+07 0.00391504 2.22973e+07 49.8501 0.00665856 0.991253 0 50.2895 GTEX-ZLWG-1626-SM-DNZZ1 1 B1 6 pieces, predominantly mucosa and submucosa with small foci of muscularis. Numerous lymphoid aggregates. 8 Small Intestine Small Intestine - Terminal Ileum 0001211 132 1113 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.986839 484680 0.972366 0.990765 0.784858 25772 1 76 0.00292917 290 0 1.26599e+08 0.0270528 994404 1.27779e+08 1.14836e+07 25817 6.28761e+07 0 0.187509 0.990765 0.77761 1.26599e+08 0.00516817 2.77979e+07 1.57203e+07 2.80616e+07 317 2.8254e+07 2.12212e+07 0.00404423 2.80453e+07 49.8147 0.00778221 0.994692 0 50.2361 GTEX-ZLWG-1726-SM-DNZZ2 1 B1 6 pieces, mucosa and muscularis 8 Colon Colon - Transverse 0001157 143 1102 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985624 472116 0.977265 0.989851 0.829901 24757 1 76 0.0032831 400 0 1.37572e+08 0.020974 2.15329e+06 1.38983e+08 1.22214e+07 24795 6.82268e+07 0 0.147364 0.989851 0.821479 1.37572e+08 0.00594292 3.01259e+07 2.17204e+07 3.04255e+07 332 3.06512e+07 2.23454e+07 0.00460733 3.04013e+07 49.7953 0.0154932 0.994078 0 50.2474 GTEX-ZLWG-1826-SM-DO11I 0 B1 6 pieces, predominantly muscularis (target) with few strips of mucosa and small amount of attached fat (not target) 8.1 Colon Colon - Sigmoid 0001159 137 1108 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.988496 273936 0.977483 0.992225 0.839273 22876 1 76 0.00253531 280 0 9.38358e+07 0.0222036 591235 9.45711e+07 9.53073e+06 22900 4.66402e+07 0 0.13821 0.992225 0.832747 9.38358e+07 0.00435933 2.01875e+07 8.53752e+06 2.04392e+07 264 2.05191e+07 1.77267e+07 0.0034439 2.04186e+07 49.8772 0.00625175 0.995953 0 50.3097 GTEX-ZLWG-1926-SM-DO92J 0 B1 2 pieces, smaller is 70% fat, larger is 90% fat; epithelial component is <5%, focal microcalcification and fibrosis 7.7 Breast Breast - Mammary Tissue 0008367 149 1096 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995164 507785 0.979987 0.995915 0.852126 21691 1 76 0.00224032 171 0 7.66581e+07 0.019648 491884 7.69725e+07 4.7123e+06 21703 3.82052e+07 0 0.127861 0.995915 0.848646 7.66581e+07 0.00267551 1.67526e+07 7.00397e+06 1.69167e+07 184 1.69256e+07 1.51953e+07 0.00245775 1.67972e+07 49.8096 0.00639039 0.996667 0 50.2437 GTEX-ZLWG-2026-SM-DO11F 1 B1 2 pieces, slivary gland represents 20-30% of the tissue, rest is squamous mucosa, stroma, fat and skeletal muscle; focal minimal acute and chronic inflammation 9 Salivary Gland Minor Salivary Gland 0006330 157 1088 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10340 02/12/2017 TruSeq.v1 RNASEQ 0.985755 352366 0.980893 0.989575 0.853958 22854 1 76 0.00274817 283 0 1.13789e+08 0.0185045 403997 1.14988e+08 1.11833e+07 22869 5.65353e+07 0 0.126936 0.989575 0.845055 1.13789e+08 0.00497797 2.55465e+07 2.0093e+07 2.57344e+07 298 2.5897e+07 2.51017e+07 0.00385877 2.57918e+07 49.8982 0.00351339 0.993394 0 50.1832 GTEX-ZLWG-2126-SM-DO91M 0 B1 2 pieces, <10% internal adipose tissue 8.6 Muscle Muscle - Skeletal 0011907 172 1073 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.994989 643023 0.983297 0.995661 0.88023 19557 1 76 0.0022521 286 0 9.47387e+07 0.0164543 1.23449e+06 9.51516e+07 5.57208e+06 19567 4.7226e+07 0 0.103067 0.995661 0.87641 9.47387e+07 0.00258449 2.04679e+07 1.16126e+07 2.06783e+07 278 2.07173e+07 2.02109e+07 0.00241818 2.04799e+07 49.7118 0.012974 0.996333 0 50.2557 GTEX-ZLWG-2226-SM-5DUWO 1 B1 2 pieces, both with ~10% fibrous tissue and nerve, few defects in one centrally (?poor fixation) 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 174 1071 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-4634 02/09/2014 TruSeq.v1 EXCLUDE 0.989012 230422 0.976673 0.991631 0.815841 21616 1 76 0.00221104 133 0 5.96402e+07 0.0230205 268971 6.01435e+07 5.32076e+06 21632 2.96794e+07 0 0.160832 0.991631 0.809013 5.96402e+07 0.00340587 1.30342e+07 6.61355e+06 1.31055e+07 140 1.31205e+07 1.06546e+07 0.00280688 1.31648e+07 50.0844 0.00447215 0.994251 0 50.1364 GTEX-ZLWG-2226-SM-DO92V 1 B1 2 pieces, both with ~10% fibrous tissue and nerve, few defects in one centrally (?poor fixation) 6.7 Adipose Tissue Adipose - Subcutaneous 0002190 174 1071 BP-43072 RNA Extraction from Paxgene-derived Lysate Plate Based 09/04/2013 LCSET-10341 02/22/2017 TruSeq.v1 RNASEQ 0.995189 575640 0.971459 0.995815 0.805571 22606 1 76 0.00217162 197 0 8.37003e+07 0.0282527 369965 8.40521e+07 4.72602e+06 22629 4.1729e+07 0 0.165888 0.995815 0.8022 8.37003e+07 0.00253961 1.82068e+07 1.22375e+07 1.83989e+07 203 1.83587e+07 1.48075e+07 0.0023555 1.83041e+07 49.9256 0.00440162 0.996442 0 50.2623 GTEX-ZLWG-2426-SM-57WG6 1 B1 2 pieces, well trimmed 7.6 Blood Vessel Artery - Tibial 0007610 184 1061 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988563 411628 0.975428 0.99184 0.838076 22189 1 76 0.00253139 171 0 8.07219e+07 0.0241808 263658 8.1386e+07 1.13328e+07 22212 4.00997e+07 0 0.137351 0.99184 0.831238 8.07219e+07 0.00444524 1.73163e+07 6.51715e+06 1.74722e+07 187 1.74791e+07 1.54764e+07 0.00348515 1.75623e+07 50.1188 0.0032396 0.995118 0 50.224 GTEX-ZLWG-2526-SM-57WDS 0 B1 4 pieces, up to 10% attached adipose tissue 6.7 Nerve Nerve - Tibial 0001323 185 1060 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.989628 310307 0.966581 0.992325 0.745938 24305 1 76 0.00273921 171 0 7.84744e+07 0.0331652 331888 7.90813e+07 1.02641e+07 24351 3.90216e+07 0 0.220643 0.992325 0.740213 7.84744e+07 0.00438634 1.71201e+07 7.61011e+06 1.7275e+07 171 1.7289e+07 1.16139e+07 0.00356054 1.73058e+07 50.0243 0.00419679 0.995023 0 50.2251 GTEX-ZP4G-0002-SM-4YUW4 B1 Blood Whole Blood 0013756 -56 BP-36644 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/04/2013 GTEx_Option_1_OM25_01 10/25/2013 Illumina OMNI SNP Array OMNI GTEX-ZP4G-0002-SM-53UBM B1 Blood Whole Blood 0013756 -56 BP-36644 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/04/2013 LCSET-4411 12/15/2013 Standard Exome Sequencing v3 (ICE) WES GTEX-ZP4G-0002-SM-6WBSI B1 Blood Whole Blood 0013756 -56 BP-36644 DNA isolation_Whole Blood_QIAGEN Puregene (Manual) 03/04/2013 LCSET-6056 09/22/2014 PCR+ 30x Coverage WGS v2 (HiSeqX) WGS GTEX-ZP4G-0003-SM-4WWED B1 9.6 Blood Cells - EBV-transformed lymphocytes EFO_0000572 -56 BP-39937 RNA isolation_Trizol Manual (Cell Pellet) 06/14/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986551 1.12219e+06 0.94652 0.989492 0.804709 23084 1 76 0.00277133 289 0 1.07621e+08 0.052776 1.04682e+06 1.08764e+08 1.4221e+07 23107 5.34753e+07 0 0.141811 0.989492 0.796253 1.07621e+08 0.00468522 2.32316e+07 5.05829e+07 2.34761e+07 279 2.35529e+07 2.4199e+07 0.00372543 2.34761e+07 49.9184 0.00962473 0.992434 0 50.2618 GTEX-ZP4G-0006-SM-4WWE6 B1 8.3 Blood Whole Blood 0013756 -56 BP-36777 RNA isolation_PAXgene Blood RNA (Manual) 03/07/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.983439 2.362e+06 0.907358 0.98613 0.76005 21010 1 76 0.00279324 215 0 1.00378e+08 0.092148 608684 1.0179e+08 1.32704e+07 21028 4.98941e+07 0 0.147308 0.98613 0.749508 1.00378e+08 0.00457545 2.05456e+07 8.90826e+07 2.08241e+07 219 2.08594e+07 1.84672e+07 0.00368192 2.08104e+07 49.9412 0.0059798 0.988821 0 50.3365 GTEX-ZP4G-0008-SM-4E3I4 B1 10 Skin Cells - Cultured fibroblasts EFO_0002009 270 BP-37539 RNA isolation_Trizol Manual (Cell Pellet) 04/03/2013 LCSET-3209,LCSET-3416 07/12/2013 TruSeq.v1 RNASEQ 0.988066 1.04219e+06 0.965286 0.991505 0.852247 21265 1 76 0.00225651 282 0 1.03083e+08 0.0343837 526748 1.03966e+08 1.22141e+07 21278 5.12474e+07 0 0.113039 0.991505 0.845007 1.03083e+08 0.00330518 2.26754e+07 2.99317e+07 2.28358e+07 269 2.29678e+07 2.54796e+07 0.00277903 2.29048e+07 49.9314 0.00506655 0.994944 0 50.1762 GTEX-ZP4G-0126-SM-4YCE3 1 B1 2 pieces, all cortex; adherent fat on one, delineated. 8.6 Adrenal Gland Adrenal Gland 0002369 164 1138 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.989836 345679 0.978481 0.993135 0.85007 23285 1 76 0.00225127 273 0 1.09849e+08 0.0211674 2.17434e+06 1.10608e+08 1.63009e+07 23310 5.46356e+07 0 0.128411 0.993135 0.844234 1.09849e+08 0.00385419 2.43799e+07 1.57295e+07 2.43393e+07 320 2.42935e+07 1.75362e+07 0.00305007 2.474e+07 50.4553 0.0196581 0.996434 0 49.9583 GTEX-ZP4G-0326-SM-4YCEF 1 B1 2 pieces, mild congestion 7.8 Spleen Spleen 0002106 169 1133 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.988543 447021 0.960581 0.991929 0.768793 24824 1 76 0.00261822 207 0 8.95085e+07 0.0386174 509827 9.02368e+07 1.30167e+07 24860 4.44801e+07 0 0.191788 0.991929 0.762588 8.95085e+07 0.00420018 1.95616e+07 1.59374e+07 1.96531e+07 229 1.97183e+07 1.46136e+07 0.0034065 1.97847e+07 50.0841 0.00564988 0.995315 0 50.1168 GTEX-ZP4G-0426-SM-4YCER 1 B1 2 pieces, reasonably well preserved, 1-2, islets well-visualized, rep. ones delineated. 6.6 Pancreas Pancreas 0001150 175 1127 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.983144 546085 0.973966 0.988443 0.833673 22620 1 76 0.00256509 135 0 9.62521e+07 0.0256745 264619 9.73776e+07 1.50736e+07 22641 4.77271e+07 0 0.140294 0.988443 0.824037 9.62521e+07 0.00460012 2.1957e+07 2.54491e+07 2.20074e+07 157 2.21508e+07 2.60169e+07 0.00357715 2.23275e+07 50.1986 0.00271745 0.993741 0 50.0574 GTEX-ZP4G-0526-SM-4YCED 1 B1 6 pieces, minimal attached serosa 7.2 Blood Vessel Artery - Aorta 0001496 184 1118 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4197 11/20/2013 TruSeq.v1 RNASEQ 0.988197 303364 0.977635 0.992273 0.859946 22298 1 76 0.00221403 172 0 8.14011e+07 0.0219838 226880 8.2035e+07 1.21596e+07 22316 4.0432e+07 0 0.117689 0.992273 0.853301 8.14011e+07 0.0041444 1.75129e+07 7.96446e+06 1.76563e+07 199 1.76941e+07 1.65425e+07 0.00317525 1.77948e+07 50.1419 0.00276565 0.996349 0 50.2039 GTEX-ZP4G-0626-SM-4WWF1 1 B1 2 pieces. Beautiful cumulus oophorus in one section, delineated 6.7 Ovary Ovary 0000992 188 1114 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.981542 521026 0.96052 0.984305 0.759765 23409 1 76 0.00251084 177 0 8.41095e+07 0.0392328 134526 8.54507e+07 1.05002e+07 23448 4.18124e+07 0 0.200755 0.984305 0.74784 8.41095e+07 0.00403185 1.83658e+07 1.65151e+07 1.8413e+07 184 1.8466e+07 1.51684e+07 0.00326921 1.85455e+07 50.1074 0.00157431 0.987067 0 50.0642 GTEX-ZP4G-0726-SM-4WWF2 1 B1 2 pieces, mainly myometrium; focal endometrial glandular/stromal elements, delineated 8.9 Uterus Uterus 0000995 190 1112 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.986155 554723 0.969135 0.98952 0.820248 25092 1 76 0.00250575 285 0 1.15436e+08 0.0304577 172966 1.16658e+08 1.65394e+07 25125 5.73482e+07 0 0.148887 0.98952 0.811653 1.15436e+08 0.00381865 2.50563e+07 1.52572e+07 2.50612e+07 306 2.51506e+07 2.3012e+07 0.00315997 2.53459e+07 50.1933 0.00148267 0.992886 0 50.0049 GTEX-ZP4G-0826-SM-4WWF3 1 B1 6 pieces, well preserved; squamous mucosa is ~5% thickness, ~0.25mm 8.2 Vagina Vagina 0000996 198 1104 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987576 406554 0.971993 0.989711 0.814344 24075 1 76 0.00260282 213 0 9.03463e+07 0.0277413 215791 9.12855e+07 1.18567e+07 24095 4.49525e+07 0 0.157649 0.989711 0.805966 9.03463e+07 0.00385239 2.01403e+07 1.59095e+07 2.01546e+07 247 2.01925e+07 1.73224e+07 0.00322625 2.02928e+07 50.1239 0.00236391 0.991846 0 50.0177 GTEX-ZP4G-0926-SM-4WWF4 1 B1 6 pieces, a few with up to 0.5mm strips of adherent serosa, delineated. All muscularis, good specimens 8.4 Esophagus Esophagus - Muscularis 0004648 202 1100 BP-42826 RNA Extraction from Paxgene-derived Lysate Plate Based 08/28/2013 LCSET-4180 11/02/2013 TruSeq.v1 RNASEQ 0.987403 292257 0.975767 0.989685 0.837735 22720 1 76 0.00241548 280 0 9.0592e+07 0.023948 509864 9.15362e+07 1.19236e+07 22740 4.50721e+07 0 0.138032 0.989685 0.829094 9.0592e+07 0.003774 1.95738e+07 9.39946e+06 1.95687e+07 263 1.95704e+07 1.69039e+07 0.00309317 1.97698e+07 50.2534 0.00557008 0.991967 0 49.9935 GTEX-ZP4G-1026-SM-4YCE1 1 B1 6 pieces, squamous mucosa is 0.25-0.5mm thick 6.5 Esophagus Esophagus - Mucosa 0006920 204 1098 BP-42869 RNA Extraction from Paxgene-derived Lysate Plate Based 08/29/2013 LCSET-4197 11/20/2013 TruSeq.v1 EXCLUDE 0.986835 328841 0.976625 0.991093 0.852317 22563 1 76 0.00223238 164 0 7.23936e+07 0.0231076 425370 7.30442e+07 1.10822e+07 22577 3.59498e+07 0 0.124308 0.991093 0.844725 7.23936e+07 0.00435407 1.59282e+07 7.84723e+06 1.60652e+07 178 1.60749e+07 1.35268e+07 0.00328866 1.62151e+07 50.217 0.00582346 0.995352 0 50.2141 GTEX-ZP4G-1126-SM-4WWCI 1 B1 6 pieces, all muscularis/connective tissue, good specimens. Minute (0.5mm) fragement of 'contaminant' gastric mucoa adjacent to one section, delineated 8.5 Esophagus Esophagus - Gastroesophageal Junction 0004550 211 1091 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.990673 365016 0.976435 0.993384 0.845909 22272 1 76 0.0023145 216 0 8.6313e+07 0.0232671 413769 8.68878e+07 7.27832e+06 22286 4.29454e+07 0 0.130526 0.993384 0.840312 8.6313e+07 0.00286103 1.86881e+07 7.66861e+06 1.88325e+07 234 1.87996e+07 1.60908e+07 0.00258702 1.89442e+07 50.1915 0.0047621 0.996095 0 50.1923 GTEX-ZP4G-1226-SM-4WWCJ 1 B1 6 pieces, remarkably well-preserved. Mucosa is 60-100% of thickness, excellent specimens 7.9 Stomach Stomach 0000945 214 1088 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.987014 465963 0.972048 0.989703 0.830505 22754 1 76 0.00228401 268 0 8.42145e+07 0.0276292 711657 8.50907e+07 7.14396e+06 22780 4.18954e+07 0 0.141543 0.989703 0.821953 8.42145e+07 0.00285678 1.89743e+07 7.88812e+07 1.93556e+07 216 1.9359e+07 2.00139e+07 0.00256962 1.92001e+07 49.7939 0.00836351 0.992391 0 50.4973 GTEX-ZP4G-1326-SM-5EGIW 1 B1 2 pieces, minimal fibrous/vascular tissue 7.8 Adipose Tissue Adipose - Visceral (Omentum) 0010414 216 1086 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4764 02/09/2014 TruSeq.v1 RNASEQ 0.985704 193764 0.978589 0.990189 0.824798 21833 1 76 0.00218125 160 0 6.56709e+07 0.0211389 480019 6.63216e+07 9.61649e+06 21850 3.26175e+07 0 0.15379 0.990189 0.816707 6.56709e+07 0.00538344 1.45431e+07 8.35951e+06 1.44474e+07 168 1.44816e+07 1.04214e+07 0.00377509 1.47779e+07 50.5064 0.00723775 0.994674 0 49.8349 GTEX-ZP4G-1426-SM-4WWCL 0 B1 6 pieces. Squamous epithelium is 1.5-2% thickness 7.1 Skin Skin - Not Sun Exposed (Suprapubic) 0036149 218 1084 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.988885 497847 0.965897 0.991981 0.784671 23976 1 76 0.00249986 238 0 8.77518e+07 0.0339382 551999 8.84611e+07 7.23561e+06 24000 4.36167e+07 0 0.181226 0.991981 0.778379 8.77518e+07 0.00326222 1.90146e+07 1.34212e+07 1.91756e+07 226 1.91589e+07 1.32608e+07 0.00287985 1.92946e+07 50.1765 0.00624002 0.995078 0 50.2108 GTEX-ZP4G-1526-SM-57WE5 1 B1 6 pieces, all muscularis 7.5 Colon Colon - Sigmoid 0001159 222 1080 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988697 327693 0.972659 0.991701 0.820227 21889 1 76 0.00235348 148 0 6.43098e+07 0.0271116 340405 6.48479e+07 8.64232e+06 21907 3.19654e+07 0 0.152432 0.991701 0.81342 6.43098e+07 0.00419386 1.39464e+07 6.60851e+06 1.40018e+07 154 1.40071e+07 1.07948e+07 0.00327088 1.41253e+07 50.2101 0.00524928 0.994705 0 50.0992 GTEX-ZP4G-1626-SM-57WGD 1 B1 6 pieces, abundant lymphoid aggregates, ~15-20% tissue present, well preserved. 7.4 Small Intestine Small Intestine - Terminal Ileum 0001211 229 1073 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.989377 867645 0.957064 0.991908 0.769021 26576 1 76 0.00248861 275 0 1.09136e+08 0.0424106 588399 1.10026e+08 1.43352e+07 26622 5.42607e+07 0 0.188043 0.991908 0.762798 1.09136e+08 0.00406304 2.3761e+07 2.96693e+07 2.38767e+07 300 2.38727e+07 1.70445e+07 0.00327382 2.40239e+07 50.1578 0.00534781 0.99444 0 50.1214 GTEX-ZP4G-1726-SM-4WWCM 1 B1 6 pieces, well preserved. Mucosa is ~15-20% thickness 8.1 Colon Colon - Transverse 0001157 236 1066 BP-43141 RNA Extraction from Paxgene-derived Lysate Plate Based 09/05/2013 LCSET-4179 11/08/2013 TruSeq.v1 RNASEQ 0.989676 363416 0.972243 0.992517 0.822971 23575 1 76 0.00251492 212 0 7.9471e+07 0.0271037 709783 8.00701e+07 6.60072e+06 23598 3.9515e+07 0 0.149271 0.992517 0.816813 7.9471e+07 0.00308246 1.74735e+07 1.21734e+07 1.76365e+07 215 1.75911e+07 1.22812e+07 0.00279788 1.77395e+07 50.21 0.00886452 0.995358 0 50.2321 GTEX-ZP4G-1926-SM-57WDZ 1 B1 2 pieces fragments of glandular tissue range from 1-3mm; ~10% of specimen; rest squamous mucosa/stroma 9.4 Salivary Gland Minor Salivary Gland 0006330 249 1053 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988006 346525 0.971774 0.991244 0.814466 23170 1 76 0.00265344 139 0 7.10054e+07 0.0276413 242025 7.16326e+07 9.37568e+06 23190 3.52845e+07 0 0.157308 0.991244 0.807334 7.10054e+07 0.00464868 1.5871e+07 1.33568e+07 1.59262e+07 158 1.59604e+07 1.32121e+07 0.0036478 1.60607e+07 50.1567 0.0033787 0.994481 0 50.0867 GTEX-ZP4G-2026-SM-57WEH 0 B1 2 pieces, trace interstitial fat 8 Muscle Muscle - Skeletal 0011907 258 1044 BP-43231 RNA Extraction from Paxgene-derived Lysate Plate Based 09/06/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.990361 441272 0.977532 0.993212 0.853239 22555 1 76 0.00226688 278 0 9.76401e+07 0.022244 1.38997e+06 9.83074e+07 1.34067e+07 22572 4.85668e+07 0 0.124293 0.993212 0.847447 9.76401e+07 0.0041345 2.1428e+07 1.38969e+07 2.14289e+07 299 2.14493e+07 1.87247e+07 0.00319801 2.16626e+07 50.2473 0.014139 0.996062 0 50.0011 GTEX-ZP4G-2126-SM-57WEA 0 B1 4 pieces, good clean specimens 6.8 Blood Vessel Artery - Tibial 0007610 265 1037 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988003 458090 0.977661 0.991873 0.882803 20725 1 76 0.0022161 216 0 9.45817e+07 0.0219479 499524 9.53566e+07 1.33196e+07 20732 4.69435e+07 0 0.0948586 0.991873 0.875629 9.45817e+07 0.00433945 1.99148e+07 8.27221e+06 2.00732e+07 240 2.00233e+07 2.12729e+07 0.00327363 2.03121e+07 50.3581 0.00523849 0.995744 0 50.1981 GTEX-ZP4G-2226-SM-57WFB 0 B1 4 pieces, good clean specimens. 6.9 Nerve Nerve - Tibial 0001323 266 1036 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.98615 594726 0.968898 0.990468 0.771501 24255 1 76 0.00244264 178 0 7.85397e+07 0.0308257 360290 7.92955e+07 1.09189e+07 24292 3.89594e+07 0 0.197397 0.990468 0.764148 7.85397e+07 0.0046436 1.72005e+07 7.6138e+06 1.7347e+07 180 1.74042e+07 1.23732e+07 0.00353832 1.74678e+07 50.0913 0.00454364 0.994787 0 50.212 GTEX-ZP4G-2326-SM-57WEM 0 B1 2 pieces, ~10% fascia/vessels, rep. areas delineated 7.1 Adipose Tissue Adipose - Subcutaneous 0002190 268 1034 BP-43308 RNA Extraction from Paxgene-derived Lysate Plate Based 09/09/2013 LCSET-4416 12/21/2013 TruSeq.v1 RNASEQ 0.988642 469762 0.979393 0.992134 0.847594 22133 1 76 0.00236699 169 0 7.64302e+07 0.020295 367931 7.70362e+07 1.12959e+07 22150 3.79619e+07 0 0.131799 0.992134 0.840927 7.64302e+07 0.00410544 1.68541e+07 7.94766e+06 1.69167e+07 197 1.693e+07 1.34119e+07 0.00323316 1.70926e+07 50.239 0.00477608 0.995626 0 50.0926 GTEX-ZP4G-2426-SM-57WEY 0 B1 6 pieces, minimal dermal fat, squamous epitheliums is ~50-60 microns,